HHsearch alignment for GI: 254780546 and conserved domain: PRK09982
>PRK09982 universal stress protein UspD; Provisional.
Probab=92.30 E-value=0.88 Score=24.55 Aligned_cols=101 Identities=15% Similarity=0.198 Sum_probs=68.0
Q ss_pred CEEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCC---C-----C-------HHHH-HHHHHHHHHHCCCC
Q ss_conf 83999966942489999999999986489972999999667798---7-----8-------4689-99999999871898
Q gi|254780546|r 20 AHILVAVSGGSDSMGLLIALHSVLSDRSFGKIKFSAISVDHCLR---E-----T-------AKDE-VRYVSDVCSRLRIA 83 (423)
Q Consensus 20 ~~i~vAvSGG~DS~aLl~ll~~~~~~~~~~~~~l~a~~vdHglr---~-----~-------s~~e-~~~v~~~~~~lgi~ 83 (423)
T Consensus 4 kHILVAVdLs~eS~~Li~KAv~lAk~~---~AklSlIhvd~~~~elY~gl~~~~~~~~~~~~~e~~~~~L~~L~~~~~YP 80 (142)
T PRK09982 4 KHIGVAISGNEEDALLVNKALELARHN---DAHLTLIHIDDGLSELYPGIYFPATEDILQLLKNKSDNKLYKLTKNIQWP 80 (142)
T ss_pred CEEEEEEECCHHHHHHHHHHHHHHHHC---CCEEEEEEEECCCHHHCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 179999855841699999999998760---98399999908846651102053125688999999999999999847998
Q ss_pred EEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 899997504787780378885455554320012344201234566656689999862
Q gi|254780546|r 84 HSVVSWKNSKPQTGLMAAAREARYALISEHAKTINATLIMTAHTFDDQLETVYMRSQ 140 (423)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~ar~~r~~~~~~~~~~~~~~~l~~ah~~dD~~Et~l~rl~ 140 (423)
T Consensus 81 I~~~~v~----~Gdl~~--------~L~~~v~~~~iDLlIcGHHh~-----fwskl~ 120 (142)
T PRK09982 81 KTKLRIE----RGEMPE--------TLLEIMQKEQCDLLVCGHHHS-----FINRLM 120 (142)
T ss_pred CEEEEEE----ECCHHH--------HHHHHHHHHCCCEEEECCCHH-----HHHHHH
T ss_conf 2478998----448899--------999999984998899656286-----999998