HHsearch alignment for GI: 254780546 and conserved domain: PRK13981
>PRK13981 NAD synthetase; Provisional.
Probab=97.85 E-value=0.00017 Score=50.89 Aligned_cols=139 Identities=14% Similarity=0.118 Sum_probs=82.8
Q ss_pred CCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECC----
Q ss_conf 7998399996694248999999999998648997299999966779878468999999999871898899997504----
Q gi|254780546|r 17 VYPAHILVAVSGGSDSMGLLIALHSVLSDRSFGKIKFSAISVDHCLRETAKDEVRYVSDVCSRLRIAHSVVSWKNS---- 92 (423)
Q Consensus 17 ~~~~~i~vAvSGG~DS~aLl~ll~~~~~~~~~~~~~l~a~~vdHglr~~s~~e~~~v~~~~~~lgi~~~~~~~~~~---- 92 (423)
T Consensus 279 ~gf~~vviGLSGGiDSaL~aaiA~dALG-----~~nV~~v~MPs~--~tS~~s~~dA~~La~~LGi~~~~i~I~~~~~~~ 351 (543)
T PRK13981 279 NGFPGVVLGLSGGIDSALVAAIAVDALG-----AENVRAVMMPSR--YTSDESLDDAAALARNLGVRYDIIPIEPAFEAF 351 (543)
T ss_pred HCCCEEEEECCCCHHHHHHHHHHHHHHC-----HHHEEEEECCCC--CCCHHHHHHHHHHHHHHCCCEEEEEHHHHHHHH
T ss_conf 0897499976788359999999998538-----343788645877--786656999999999959974875149999999
Q ss_pred -----------C---CCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
Q ss_conf -----------7---87780378885455554320012344201234566656689999862365444332235764100
Q gi|254780546|r 93 -----------K---PQTGLMAAAREARYALISEHAKTINATLIMTAHTFDDQLETVYMRSQRDYAEKGMGLSGMCDTIL 158 (423)
Q Consensus 93 -----------~---~~~~~~~~ar~~r~~~~~~~~~~~~~~~l~~ah~~dD~~Et~l~rl~r~sg~~g~~l~~~~~~~~ 158 (423)
T Consensus 352 ~~~l~~~f~~~~~dvt~ENiQAR~R---~~iLm~laN~~g~lvl~Tg----nkSE~a----vGy~TlyGD----~~---- 412 (543)
T PRK13981 352 EAALAPLFAGTEPDITEENLQSRIR---GTLLMALSNKFGSLVLTTG----NKSEMA----VGYATLYGD----MA---- 412 (543)
T ss_pred HHHHHHHHCCCCCCCCHHHHHHHHH---HHHHHHHHHCCCCEEECCC----CHHHHH----HCHHHHCCC----CC----
T ss_conf 9974044168766652234548889---9999998733896796478----672787----474653376----55----
Q ss_pred CCCCCEEECCHHCCCHHHHHHHHHHHCC
Q ss_conf 3579687101210428999998998189
Q gi|254780546|r 159 YDLNLWISRPFLRCRREDIRSFLLQRNI 186 (423)
Q Consensus 159 ~~~~~~i~RPLL~~~r~~l~~~~~~~~i 186 (423)
T Consensus 413 --g---~~avi~dv~KT~V~~L~r~~n~ 435 (543)
T PRK13981 413 --G---GFAPIKDVYKTLVYRLCRWRNT 435 (543)
T ss_pred --C---CCCCCCCCCHHHHHHHHHHHHH
T ss_conf --6---7430368659999999999865