HHsearch alignment for GI: 254780546 and conserved domain: TIGR03183
>TIGR03183 DNA_S_dndC putative sulfurtransferase DndC. Members of this protein family are the DndC protein from the dnd (degradation during electrophoresis) operon. The dnd phenotype reflects a sulfur-containing modification to DNA. This operon is sparsely and sporadically distributed among bactera; among the first eight examples are members from the Actinobacteria, Firmicutes, Gammaproteobacteria, Cyanobacteria. DndC is suggested to be a sulfurtransferase.
Probab=98.27 E-value=2.5e-05 Score=56.67 Aligned_cols=170 Identities=16% Similarity=0.211 Sum_probs=101.3
Q ss_pred HCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCC--CCCEEEEEEEECCCCC-CC----HHHHHHHHHHHHHHCCCCEEEE
Q ss_conf 527998399996694248999999999998648--9972999999667798-78----4689999999998718988999
Q gi|254780546|r 15 SLVYPAHILVAVSGGSDSMGLLIALHSVLSDRS--FGKIKFSAISVDHCLR-ET----AKDEVRYVSDVCSRLRIAHSVV 87 (423)
Q Consensus 15 ~l~~~~~i~vAvSGG~DS~aLl~ll~~~~~~~~--~~~~~l~a~~vdHglr-~~----s~~e~~~v~~~~~~lgi~~~~~ 87 (423)
T Consensus 9 Y~~d~~PWvIGySGGKDSTavLqLvw~Al~~Lp~e~r~K~v~VIssDTlVEnP~V~~~v~~~L~~i~~~a~~~~LPi~~~ 88 (447)
T TIGR03183 9 YCADDIPWVIGYSGGKDSTAVLQLVWNALSELPPEQRTKKIHVISTDTLVENPIVAAWVNVSLERMQEAAQKQGLPIEPH 88 (447)
T ss_pred HHCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEE
T ss_conf 85379987997587739999999999999847887576888999799875577999999999999999999749982368
Q ss_pred EEECC-------------CCCCCCHHHHHHHH--------HHHHHHHCCCCCCCCHHHHHHHHHHH-HHHHHHHHCCCCC
Q ss_conf 97504-------------78778037888545--------55543200123442012345666566-8999986236544
Q gi|254780546|r 88 SWKNS-------------KPQTGLMAAAREAR--------YALISEHAKTINATLIMTAHTFDDQL-ETVYMRSQRDYAE 145 (423)
Q Consensus 88 ~~~~~-------------~~~~~~~~~ar~~r--------~~~~~~~~~~~~~~~l~~ah~~dD~~-Et~l~rl~r~sg~ 145 (423)
T Consensus 89 ~~~P~~~dtFWvnlIGrGYPaP~~~--FRWCTdrLKI~P~~~fi~~~v~~~ge~ilvLGtR~~ES~~Ra~~i~k~e~~~~ 166 (447)
T TIGR03183 89 RLTPAIEDTFWVNLIGKGYPAPRQK--FRWCTDRLKISPSNTFIRDKVAANGEVILVLGTRKNESQARAAVMEKHEGGST 166 (447)
T ss_pred EECCCCCCCHHHHHCCCCCCCCCCC--CCCCCHHHHCCHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHCCCC
T ss_conf 9337854430001034630799987--65255766368289999986521496899995652777999999998644670
Q ss_pred CCCCCCCCCCCCCCCCCCEEECCHHCCCHHHHHHHHHHHCCCCCCC
Q ss_conf 4332235764100357968710121042899999899818932026
Q gi|254780546|r 146 KGMGLSGMCDTILYDLNLWISRPFLRCRREDIRSFLLQRNISWCED 191 (423)
Q Consensus 146 ~g~~l~~~~~~~~~~~~~~i~RPLL~~~r~~l~~~~~~~~i~wveD 191 (423)
T Consensus 167 ~~-~ls---~h-~~l~n~~vy~PI~dws~ddVW~yL~~~~~Pwg~~ 207 (447)
T TIGR03183 167 RD-RLS---RN-SSLPNSWVYTPIEDWSNDDVWMYLLQNPNPWGYD 207 (447)
T ss_pred HH-HCC---CC-CCCCCCEEECCHHHCCHHHHHHHHCCCCCCCCCC
T ss_conf 42-127---68-8888837973067476408999863389988998