HHsearch results for GI: 254780546 and protein with PDBid: 1ni5_A
>1ni5_A Putative cell cycle protein MESJ; structural genomics, ATP, ATPase, PP-type, PSI, protein structure initiative; 2.65A {Escherichia coli} SCOP: b.153.1.2 c.26.2.5 d.229.1.1
Probab=100.00 E-value=0 Score=426.22 Aligned_cols=323 Identities=23% Similarity=0.291 Sum_probs=253.4
Q ss_pred HHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCC
Q ss_conf 85279983999966942489999999999986489972999999667798784689999999998718988999975047
Q gi|254780546|r 14 RSLVYPAHILVAVSGGSDSMGLLIALHSVLSDRSFGKIKFSAISVDHCLRETAKDEVRYVSDVCSRLRIAHSVVSWKNSK 93 (423)
Q Consensus 14 ~~l~~~~~i~vAvSGG~DS~aLl~ll~~~~~~~~~~~~~l~a~~vdHglr~~s~~e~~~v~~~~~~lgi~~~~~~~~~~~ 93 (423)
+++..+.+|+||||||+|||||||+++++.... .++++.|+|||||+|++|++|+++|+++|+++|||+++.+++..+
T Consensus 8 ~~~~~~~~vlva~SGG~DS~~ll~~l~~~~~~~--~~~~~~~~h~~h~~r~~s~~~~~~v~~~~~~~~i~~~~~~~~~~~ 85 (433)
T 1ni5_A 8 RQLLTSRQILVAFSGGLDSTVLLHQLVQWRTEN--PGVALRAIHVHHGLSANADAWVTHCENVCQQWQVPLVVERVQLAQ 85 (433)
T ss_dssp HHHTTCSEEEEECCSBHHHHHHHHHHHHHHTTS--TTCEEEEEEECCSCCSSHHHHHHHHHHHHHHTTCCEEEECCCCCC
T ss_pred HHCCCCCEEEEEEECCHHHHHHHHHHHHHHHHC--CCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCC
T ss_conf 325899829999818099999999999989758--998199999829889557999999999999759978999996478
Q ss_pred CCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCHHCCC
Q ss_conf 87780378885455554320012344201234566656689999862365444332235764100357968710121042
Q gi|254780546|r 94 PQTGLMAAAREARYALISEHAKTINATLIMTAHTFDDQLETVYMRSQRDYAEKGMGLSGMCDTILYDLNLWISRPFLRCR 173 (423)
Q Consensus 94 ~~~~~~~~ar~~r~~~~~~~~~~~~~~~l~~ah~~dD~~Et~l~rl~r~sg~~g~~l~~~~~~~~~~~~~~i~RPLL~~~ 173 (423)
++.++|++||..||..+...+ .++.+++||||+|||+||++|+++||+|+.|+ .||++.+ ...++.++||||.++
T Consensus 86 ~~~~~e~~aR~~Ry~~~~~~~--~~~~~i~~aHh~dD~~Et~l~~l~rg~~~~gl--~~~~~~~-~~~~~~i~RPlL~~~ 160 (433)
T 1ni5_A 86 EGLGIEAQARQARYQAFARTL--LPGEVLVTAQHLDDQCETFLLALKRGSGPAGL--SAMAEVS-EFAGTRLIRPLLART 160 (433)
T ss_dssp SSSTTTTHHHHHHHHHHHHTC--CTTEEEECCCCHHHHHHHHHHHHTTTCCTTGG--GCCCSEE-EETTEEEECGGGSCC
T ss_pred CCCCHHHHHHHHHHHHHHHHH--CCCCEEEEEEECHHHHHHHHHHHHCCCCCCCC--CCCCCEE-CCCCCEEEEECCCCC
T ss_conf 888879999999999878654--16570322001103899999987257764334--3432221-157850887500186
Q ss_pred HHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-CCCE
Q ss_conf 899999899818932026678642210189997643453100---667799999999997999999999884004-4997
Q gi|254780546|r 174 REDIRSFLLQRNISWCEDPSNTDDRFERVRVRRFVRDIDLHA---LYLKMKKFQDLRVKVNNAVAMLIPKYLTVH-MRSI 249 (423)
Q Consensus 174 r~~l~~~~~~~~i~wveDpSN~d~~f~R~rlR~~l~~l~~~~---l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~ 249 (423)
|+||++||++++++|+|||||.|++|+||++|+.+.|+..+. +.....++..............+....... ....
T Consensus 161 k~ei~~y~~~~~i~~~eD~SN~d~~y~RN~IR~~iiP~l~~~~p~~~~~i~~~~~~l~e~~~~l~~~~~~~~~~~~~~~~ 240 (433)
T 1ni5_A 161 RGELVQWARQYDLRWIEDESNQDDSYDRNFLRLRVVPLLQQRWPHFAEATARSAALCAEQESLLDELLADDLAHCQSPQG 240 (433)
T ss_dssp HHHHHHHHHHTTCCCBCCCCGGGTTSHHHHHHHTHHHHHHHHCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHBCSSS
T ss_pred HHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 99999998746776203667776113378888875304444371699999999999999999999999999986006787
Q ss_pred EEECHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHC---CCCCEEECCCEEEEEECCEEEEEECCCCCC
Q ss_conf 99847783375578989999999998358999988999999999866---998456107579998899899984534377
Q gi|254780546|r 250 IAISQDILNIDSTLLFYLLRVSAAICGGQISLPGYRSMERVMLFLKS---GKRGCVSIGRVVIDRRANFLWITRAVRNLP 326 (423)
Q Consensus 250 ~~~~~~~~~~~~~~~~r~l~~~l~~~~g~~~~p~~~~l~~ll~~l~~---~~~~~~tl~g~~i~~~~~~l~i~RE~~~~~ 326 (423)
......+..++...+.++++.|+...+ .+.|+..++.+++..+.. +.+.....+++.+.++++.+++.++....+
T Consensus 241 ~l~~~~l~~l~~~~~~~vl~~~l~~~~--~~~~~~~~l~~il~~l~~~~~~~~~~~~~~~~~i~~~~~~l~~~~~~~~~~ 318 (433)
T 1ni5_A 241 TLQIVPMLAMSDARRAAIIRRWLAGQN--APMPSRDALVRIWQEVALAREDASPCLRLGAFEIRRYQSQLWWIKSVTGQS 318 (433)
T ss_dssp CEESGGGTTSCHHHHHHHHHHHHHHTT--CCCCCHHHHHHHHHHTTTSCGGGCCEEEETTEEEEESSSEEEEEECCCCCT
T ss_pred EEEHHHHHHCCHHHHHHHHHHHHHHCC--CCCCCHHHHHHHHHHHHHHCCCCCEEEEECCEEEEEECCEEEEEECCCCCC
T ss_conf 575686431789999999999999669--999988999999999975244677277558999999899999981577754
Q ss_pred CCC----CCCCCCEEECCCEEEE
Q ss_conf 552----3689823207841751
Q gi|254780546|r 327 TLI----LYPEETTVWDGRYQFQ 345 (423)
Q Consensus 327 ~~~----~~~~~~~~wDgR~~i~ 345 (423)
... .......+++|.+.+.
T Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~ 341 (433)
T 1ni5_A 319 ENIVPWQTWLQPLELPAGLGSVQ 341 (433)
T ss_dssp TCEEECTTTTSCEECSTTCCEEE
T ss_pred CCCCCCCCCCCCEECCCCCCEEE
T ss_conf 43453223554224258873799