HHsearch results for GI: 254780546 and protein with PDBid: 1xng_A
>1xng_A NH(3)-dependent NAD(+) synthetase; amidotransferase, ligase; HET: DND ATP; 1.70A {Helicobacter pylori} SCOP: c.26.2.1 PDB: 1xnh_A
Probab=99.08 E-value=2e-09 Score=84.08 Aligned_cols=161 Identities=14% Similarity=0.147 Sum_probs=96.6
Q ss_pred HHHHHHHHHC---CCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCC
Q ss_conf 9999999852---7998399996694248999999999998648997299999966779878468999999999871898
Q gi|254780546|r 7 ESVRFFVRSL---VYPAHILVAVSGGSDSMGLLIALHSVLSDRSFGKIKFSAISVDHCLRETAKDEVRYVSDVCSRLRIA 83 (423)
Q Consensus 7 ~~~~~~~~~l---~~~~~i~vAvSGG~DS~aLl~ll~~~~~~~~~~~~~l~a~~vdHglr~~s~~e~~~v~~~~~~lgi~ 83 (423)
+.+..|++.- .+..+++||+|||+||++.+.+++..... ++++++++++.. ++++.......|+.+||+
T Consensus 10 ~~l~~~i~~~v~~~g~k~vvvglSGGVDSav~A~La~~a~~~------~v~~v~mp~~~~--~~~~~~~A~~~a~~Lgi~ 81 (268)
T 1xng_A 10 VYLCDFLEKEVQKRGFKKVVYGLSGGLDSAVVGVLCQKVFKE------NAHALLMPSSVS--MPENKTDALNLCEKFSIP 81 (268)
T ss_dssp HHHHHHHHHHHHHTTCCCEEEECCSSHHHHHHHHHHHHHHGG------GEEEEECCCSSS--CHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHH------CCEEEECCCHHC--CHHHHHHHHHHHHHHHHC
T ss_conf 999999999999829981999786889999999999985032------267871350105--715579999999983302
Q ss_pred EEEEEEECC--------CCCCC--CHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf 899997504--------78778--03788854555543200123442012345666566899998623654443322357
Q gi|254780546|r 84 HSVVSWKNS--------KPQTG--LMAAAREARYALISEHAKTINATLIMTAHTFDDQLETVYMRSQRDYAEKGMGLSGM 153 (423)
Q Consensus 84 ~~~~~~~~~--------~~~~~--~~~~ar~~r~~~~~~~~~~~~~~~l~~ah~~dD~~Et~l~rl~r~sg~~g~~l~~~ 153 (423)
+.+...... ..... .....-+.|...+...+...+...+.|++- .|+.. |-+..
T Consensus 82 ~~~i~~~~~~~~~~~~~~~~~~~~~~n~~aR~r~~~ly~~a~~~~~~v~gt~n~----~e~~~-----g~~t~------- 145 (268)
T 1xng_A 82 YTEYSIAPYDAIFSSHFKDASLTRKGNFCARLRMAFLYDYSLKSDSLVIGTSNK----SERML-----GYGTL------- 145 (268)
T ss_dssp EEECCCHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHHHHTCEEBCCCCH----HHHHH-----TCSCT-------
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC----CCEEE-----CCCCC-------
T ss_conf 301327999988887501245678778899987888888899709824688775----43103-----56765-------
Q ss_pred CCCCCCCCCCEEECCHHCCCHHHHHHHHHHHCCC--CCCCCCCCC
Q ss_conf 6410035796871012104289999989981893--202667864
Q gi|254780546|r 154 CDTILYDLNLWISRPFLRCRREDIRSFLLQRNIS--WCEDPSNTD 196 (423)
Q Consensus 154 ~~~~~~~~~~~i~RPLL~~~r~~l~~~~~~~~i~--wveDpSN~d 196 (423)
.+...-.+=||-++.|.|+++.++..|+| .++-|.-.+
T Consensus 146 -----~gd~~~~~~Pl~~L~K~eVr~LAr~lglP~~ii~k~Ps~~ 185 (268)
T 1xng_A 146 -----FGDLACAINPIGELFKTEVYELARRLNIPKKILNKPPSAD 185 (268)
T ss_dssp -----TTTTCCSEETTTTSCHHHHHHHHHHTTCCHHHHTSCCCCC
T ss_pred -----HHHHCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCCCCCC
T ss_conf -----5542668411469709999999998099699807999989