HHsearch results for GI: 254780546 and protein with PDBid: 2e18_A

>2e18_A NH(3)-dependent NAD(+) synthetase; ligase, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.10A {Pyrococcus horikoshii OT3}
Probab=98.84  E-value=2.2e-08  Score=76.71  Aligned_cols=149  Identities=17%  Similarity=0.193  Sum_probs=88.4

Q ss_pred             HHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEE
Q ss_conf             99999852799839999669424899999999999864899729999996677987846899999999987189889999
Q gi|254780546|r    9 VRFFVRSLVYPAHILVAVSGGSDSMGLLIALHSVLSDRSFGKIKFSAISVDHCLRETAKDEVRYVSDVCSRLRIAHSVVS   88 (423)
Q Consensus         9 ~~~~~~~l~~~~~i~vAvSGG~DS~aLl~ll~~~~~~~~~~~~~l~a~~vdHglr~~s~~e~~~v~~~~~~lgi~~~~~~   88 (423)
                      ++.+++. ....+++||+|||+||++.+.++++...     +.++.+++.++..    ..+.+.++..|+.+|+++.+..
T Consensus        13 l~d~~~~-~g~~~vvvglSGGVDSav~A~La~~AlG-----~~~v~~v~~~~~~----~~~~~~A~~~~~~lgi~~~~i~   82 (257)
T 2e18_A           13 ILEFIRE-KGNNGVVIGISGGVDSATVAYLATKALG-----KEKVLGLIMPYFE----NKDVEDAKLVAEKLGIGYKVIN   82 (257)
T ss_dssp             HHHHHHH-HCTTCEEEECCSSHHHHHHHHHHHHHHC-----GGGEEEEECCSSC----STHHHHHHHHHHHHTCEEEECC
T ss_pred             HHHHHHH-HCCCCEEEECCCCHHHHHHHHHHHHHCC-----CCEEEEECCCCCC----HHHHHHHHHHHHHHCCCCCEEE
T ss_conf             9999998-3999789968877999999999998638-----6416885157653----0347999999986378730243


Q ss_pred             EECC--------CCC---CCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf             7504--------787---78037888545555432001234420123456665668999986236544433223576410
Q gi|254780546|r   89 WKNS--------KPQ---TGLMAAAREARYALISEHAKTINATLIMTAHTFDDQLETVYMRSQRDYAEKGMGLSGMCDTI  157 (423)
Q Consensus        89 ~~~~--------~~~---~~~~~~ar~~r~~~~~~~~~~~~~~~l~~ah~~dD~~Et~l~rl~r~sg~~g~~l~~~~~~~  157 (423)
                      .+..        .+.   ......-.+.|...+...+...+...+.|+. .+   |.     ..|.+...          
T Consensus        83 i~~~~~~~~~~l~~~~~~~~~~ni~ar~r~~~l~~~a~~~~~~vl~t~n-~s---e~-----~~g~~t~~----------  143 (257)
T 2e18_A           83 IKPIVDSFVENLELNLDRKGLGNIMSRTRMIMLYAHANSLGRIVLGTSN-RS---EF-----LTGYFTKW----------  143 (257)
T ss_dssp             CHHHHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHHHHTCEEECCCC-HH---HH-----HHTCSCTT----------
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCC-CC---HH-----HEECCCCC----------
T ss_conf             0478999999864556677788789888689999998863977944787-34---23-----20135556----------


Q ss_pred             CCCCCCEEECCHHCCCHHHHHHHHHHHCCCC
Q ss_conf             0357968710121042899999899818932
Q gi|254780546|r  158 LYDLNLWISRPFLRCRREDIRSFLLQRNISW  188 (423)
Q Consensus       158 ~~~~~~~i~RPLL~~~r~~l~~~~~~~~i~w  188 (423)
                        ......+-||-++.|+|+++.++..|++.
T Consensus       144 --gd~~~~~~Pl~dL~K~eVr~La~~Lglp~  172 (257)
T 2e18_A          144 --GDGASDYAPIINLYKTEVWEIAKRIGVPE  172 (257)
T ss_dssp             --STTCSSBCTTTTSCHHHHHHHHHHHTCCH
T ss_pred             --CCCCCCCCCCCCCCHHHHHHHHHHCCCCH
T ss_conf             --75457765456884999999999849996