HHsearch results for GI: 254780546 and protein with PDBid: 2e18_A
>2e18_A NH(3)-dependent NAD(+) synthetase; ligase, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.10A {Pyrococcus horikoshii OT3}
Probab=98.84 E-value=2.2e-08 Score=76.71 Aligned_cols=149 Identities=17% Similarity=0.193 Sum_probs=88.4
Q ss_pred HHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEE
Q ss_conf 99999852799839999669424899999999999864899729999996677987846899999999987189889999
Q gi|254780546|r 9 VRFFVRSLVYPAHILVAVSGGSDSMGLLIALHSVLSDRSFGKIKFSAISVDHCLRETAKDEVRYVSDVCSRLRIAHSVVS 88 (423)
Q Consensus 9 ~~~~~~~l~~~~~i~vAvSGG~DS~aLl~ll~~~~~~~~~~~~~l~a~~vdHglr~~s~~e~~~v~~~~~~lgi~~~~~~ 88 (423)
++.+++. ....+++||+|||+||++.+.++++... +.++.+++.++.. ..+.+.++..|+.+|+++.+..
T Consensus 13 l~d~~~~-~g~~~vvvglSGGVDSav~A~La~~AlG-----~~~v~~v~~~~~~----~~~~~~A~~~~~~lgi~~~~i~ 82 (257)
T 2e18_A 13 ILEFIRE-KGNNGVVIGISGGVDSATVAYLATKALG-----KEKVLGLIMPYFE----NKDVEDAKLVAEKLGIGYKVIN 82 (257)
T ss_dssp HHHHHHH-HCTTCEEEECCSSHHHHHHHHHHHHHHC-----GGGEEEEECCSSC----STHHHHHHHHHHHHTCEEEECC
T ss_pred HHHHHHH-HCCCCEEEECCCCHHHHHHHHHHHHHCC-----CCEEEEECCCCCC----HHHHHHHHHHHHHHCCCCCEEE
T ss_conf 9999998-3999789968877999999999998638-----6416885157653----0347999999986378730243
Q ss_pred EECC--------CCC---CCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf 7504--------787---78037888545555432001234420123456665668999986236544433223576410
Q gi|254780546|r 89 WKNS--------KPQ---TGLMAAAREARYALISEHAKTINATLIMTAHTFDDQLETVYMRSQRDYAEKGMGLSGMCDTI 157 (423)
Q Consensus 89 ~~~~--------~~~---~~~~~~ar~~r~~~~~~~~~~~~~~~l~~ah~~dD~~Et~l~rl~r~sg~~g~~l~~~~~~~ 157 (423)
.+.. .+. ......-.+.|...+...+...+...+.|+. .+ |. ..|.+...
T Consensus 83 i~~~~~~~~~~l~~~~~~~~~~ni~ar~r~~~l~~~a~~~~~~vl~t~n-~s---e~-----~~g~~t~~---------- 143 (257)
T 2e18_A 83 IKPIVDSFVENLELNLDRKGLGNIMSRTRMIMLYAHANSLGRIVLGTSN-RS---EF-----LTGYFTKW---------- 143 (257)
T ss_dssp CHHHHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHHHHTCEEECCCC-HH---HH-----HHTCSCTT----------
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCC-CC---HH-----HEECCCCC----------
T ss_conf 0478999999864556677788789888689999998863977944787-34---23-----20135556----------
Q ss_pred CCCCCCEEECCHHCCCHHHHHHHHHHHCCCC
Q ss_conf 0357968710121042899999899818932
Q gi|254780546|r 158 LYDLNLWISRPFLRCRREDIRSFLLQRNISW 188 (423)
Q Consensus 158 ~~~~~~~i~RPLL~~~r~~l~~~~~~~~i~w 188 (423)
......+-||-++.|+|+++.++..|++.
T Consensus 144 --gd~~~~~~Pl~dL~K~eVr~La~~Lglp~ 172 (257)
T 2e18_A 144 --GDGASDYAPIINLYKTEVWEIAKRIGVPE 172 (257)
T ss_dssp --STTCSSBCTTTTSCHHHHHHHHHHHTCCH
T ss_pred --CCCCCCCCCCCCCCHHHHHHHHHHCCCCH
T ss_conf --75457765456884999999999849996