HHsearch results for GI: 254780546 and protein with PDBid: 2hma_A
>2hma_A Probable tRNA (5-methylaminomethyl-2- thiouridylate)-methyltransferase; alpha-beta, beta barrel, structural genomics, PSI-2; HET: MSE SAM; 2.41A {Streptococcus pneumoniae}
Probab=99.52 E-value=1.1e-14 Score=121.27 Aligned_cols=173 Identities=17% Similarity=0.158 Sum_probs=120.0
Q ss_pred CCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCC------CCHHHHHHHHHHHHHHCCCCEEEEEEE
Q ss_conf 79983999966942489999999999986489972999999667798------784689999999998718988999975
Q gi|254780546|r 17 VYPAHILVAVSGGSDSMGLLIALHSVLSDRSFGKIKFSAISVDHCLR------ETAKDEVRYVSDVCSRLRIAHSVVSWK 90 (423)
Q Consensus 17 ~~~~~i~vAvSGG~DS~aLl~ll~~~~~~~~~~~~~l~a~~vdHglr------~~s~~e~~~v~~~~~~lgi~~~~~~~~ 90 (423)
+...||+||+|||+||++-+++|++- +++|+.+|+...-. ..+.++...++++|+.|||||+++...
T Consensus 7 ~~k~rV~v~mSGGVDSsvaA~LL~~~-------G~~V~gv~m~~~~~~~~~~~c~~~~d~~da~~va~~LgIp~~~~d~~ 79 (376)
T 2hma_A 7 NSKTRVVVGMSGGVDSSVTALLLKEQ-------GYDVIGIFMKNWDDTDENGVCTATEDYKDVVAVADQIGIPYYSVNFE 79 (376)
T ss_dssp GGGSEEEEECCSSHHHHHHHHHHHHT-------TCEEEEEEEECCCCCC----CHHHHHHHHHHHHHHHHTCCEEEEECH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHC-------CCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECHH
T ss_conf 87688999926879999999999977-------99579999978778777787783788999999999859988996508
Q ss_pred CC---------------CCCCCCHHHH-HHHHHHHHHHHCCCCCCCCHHHHHHHHHHH-HHHHHHHHCCCCC--C-CCCC
Q ss_conf 04---------------7877803788-854555543200123442012345666566-8999986236544--4-3322
Q gi|254780546|r 91 NS---------------KPQTGLMAAA-REARYALISEHAKTINATLIMTAHTFDDQL-ETVYMRSQRDYAE--K-GMGL 150 (423)
Q Consensus 91 ~~---------------~~~~~~~~~a-r~~r~~~~~~~~~~~~~~~l~~ah~~dD~~-Et~l~rl~r~sg~--~-g~~l 150 (423)
.. -.++|-.-.+ +.....++.+.+.+.++.+++|||.+--.. ++--..+.++.-. + .--|
T Consensus 80 ~~f~~~V~~~f~~~y~~G~TPNPcv~CN~~IKF~~l~~~a~~~g~d~iATGHYAri~~~~~g~~~L~r~~D~~KDQSYfL 159 (376)
T 2hma_A 80 KEYWDRVFEYFLAEYRAGRTPNPDVMCNKEIKFKAFLDYAITLGADYVATGHYARVARDEDGTVHMLRGVDNGKDQTYFL 159 (376)
T ss_dssp HHHHHHTHHHHHHHHHTTCCCCHHHHHHHHTTTTHHHHHHHTTTCSEEECCCSEEEEECSSSCEEEEECSSTTTCCGGGG
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCCHHHCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCEEEEECCCCCCCCCEEE
T ss_conf 99999998989999860379994421123466999999998615662146734213677998689885167777742244
Q ss_pred CCCCCCCCCCCCCEEECCHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf 35764100357968710121042899999899818932026678642210
Q gi|254780546|r 151 SGMCDTILYDLNLWISRPFLRCRREDIRSFLLQRNISWCEDPSNTDDRFE 200 (423)
Q Consensus 151 ~~~~~~~~~~~~~~i~RPLL~~~r~~l~~~~~~~~i~wveDpSN~d~~f~ 200 (423)
+.+.+... -+++=||-+++|+|+|+.++++|++..+-|..++..|-
T Consensus 160 ~~l~~~~L----~~~iFPLG~~~K~eVR~iA~~~gl~~a~K~dSq~ICFi 205 (376)
T 2hma_A 160 SQLSQEQL----QKTMFPLGHLEKPEVRRLAEEAGLSTAKKKDSTGICFI 205 (376)
T ss_dssp TTCCHHHH----TTEECTTTTCCHHHHHHHHHHTTCTTTTCCCCCSCTTT
T ss_pred EEECHHHH----HCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCC
T ss_conf 43258788----36668889997789999998759532676455453003