HHsearch results for GI: 254780546 and protein with PDBid: 3ilv_A
>3ilv_A Glutamine-dependent NAD(+) synthetase; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 1.79A {Cytophaga hutchinsonii atcc 33406}
Probab=96.80 E-value=0.0018 Score=42.08 Aligned_cols=146 Identities=17% Similarity=0.134 Sum_probs=77.9
Q ss_pred CCCCCEEEEEECCCHHHHHHHHHHHHHHHHCC------------CC-----------------CEEEE------EEEECC
Q ss_conf 27998399996694248999999999998648------------99-----------------72999------999667
Q gi|254780546|r 16 LVYPAHILVAVSGGSDSMGLLIALHSVLSDRS------------FG-----------------KIKFS------AISVDH 60 (423)
Q Consensus 16 l~~~~~i~vAvSGG~DS~aLl~ll~~~~~~~~------------~~-----------------~~~l~------a~~vdH 60 (423)
-+...++++++|||.||.+.+.++.+...... .. ..+|. ..+-.
T Consensus 300 k~~~~~~vlglSGGiDSal~a~la~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~mp~~y~s~- 378 (634)
T 3ilv_A 300 KSRSKGFVLSLSGGADSSACAIMVAEMIRKGLKELGLTAFLQKSNMETLFDLPALQHLPFEEQAKKITAVFLTTAYQST- 378 (634)
T ss_dssp HTTCCSEEEECCSSHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHTCGGGCCSSCSSCTTSHHHHHHHHHHHEEEEEEEC-
T ss_pred HHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCC-
T ss_conf 4047776767862055769999999999987776332222245525555445665313334441037898658754467-
Q ss_pred CCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCC-------------------CCCCCHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 798784689999999998718988999975047-------------------8778037888545555432001234420
Q gi|254780546|r 61 CLRETAKDEVRYVSDVCSRLRIAHSVVSWKNSK-------------------PQTGLMAAAREARYALISEHAKTINATL 121 (423)
Q Consensus 61 glr~~s~~e~~~v~~~~~~lgi~~~~~~~~~~~-------------------~~~~~~~~ar~~r~~~~~~~~~~~~~~~ 121 (423)
+..+++-....++.|+.+|+++.++.++..- .....++...+.|-..+...+...+...
T Consensus 379 --~~~~d~t~~~A~~la~~lg~~~~~i~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~eNiqaR~R~~~l~~~an~~~~lv 456 (634)
T 3ilv_A 379 --RNSGDETYTSAKTLAESIGATFYNWSVDEEIEQYKATIENVIERPLTWEKDDITLQNIQARGRAPIIWMLTNVKQALL 456 (634)
T ss_dssp --TTCCSHHHHHHHHHHHHHTCEEEEEECHHHHHHHHHHHHHHTTSCCCTTTCHHHHHHHHHHTTHHHHHHHHHHHTCEE
T ss_pred --CCCHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEE
T ss_conf --761688999999999971881578861089999997644320367676300334441455677999999775479799
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCHHCCCHHHHHHHHHHHC
Q ss_conf 1234566656689999862365444332235764100357968710121042899999899818
Q gi|254780546|r 122 IMTAHTFDDQLETVYMRSQRDYAEKGMGLSGMCDTILYDLNLWISRPFLRCRREDIRSFLLQRN 185 (423)
Q Consensus 122 l~~ah~~dD~~Et~l~rl~r~sg~~g~~l~~~~~~~~~~~~~~i~RPLL~~~r~~l~~~~~~~~ 185 (423)
+.|+ +-.|. ..|-.-. .+...--+-|+-+++|.+++..++..+
T Consensus 457 l~Tg----N~SE~-----a~Gy~T~------------~GD~~~~~~pi~~l~Kt~v~~l~~~~~ 499 (634)
T 3ilv_A 457 ITTS----NRSEG-----DVGYATM------------DGDTAGGIAPIAGVDKDFIRSWLRWAE 499 (634)
T ss_dssp BCCC----CHHHH-----HTTCSCT------------TTTTCSSBBTTTTSCHHHHHHHHHHHH
T ss_pred ECCC----CCCCC-----EECCEEC------------CCCCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 8579----87771-----0411031------------587666664016872899999999963