HHSEARCH alignment of GI: 254780546 and SCOP domain: d1kqpa_

Alignment
>d1kqpa_ c.26.2.1 (A:) NH3-dependent NAD+-synthetase {Bacillus subtilis [TaxId: 1423]}
Probab=98.24  E-value=2.3e-05  Score=53.69  Aligned_cols=157  Identities=15%  Similarity=0.159  Sum_probs=85.4

Q ss_pred             CCHHHHHH---HHHHHC---CCCCEEEEEECCCHHHHHHHHHHHHHHHH--CCCCCEEEEEEEECCCCCCCHHHHHHHHH
Q ss_conf             69899999---999852---79983999966942489999999999986--48997299999966779878468999999
Q gi|254780546|r    3 LSPIESVR---FFVRSL---VYPAHILVAVSGGSDSMGLLIALHSVLSD--RSFGKIKFSAISVDHCLRETAKDEVRYVS   74 (423)
Q Consensus         3 ~~p~~~~~---~~~~~l---~~~~~i~vAvSGG~DS~aLl~ll~~~~~~--~~~~~~~l~a~~vdHglr~~s~~e~~~v~   74 (423)
                      +.|.+.+.   .|++..   .+..+++|++|||.||.+.+.+++.....  ....+.+++++...+.-. .+.++   .+
T Consensus        16 ~d~~e~i~~~v~~lrdy~~ksg~~gvvvglSGGIDSAv~a~L~~~A~~~~~~~~g~~~v~~v~mP~~~~-~~~~~---a~   91 (271)
T d1kqpa_          16 IDPKQEIEDRVNFLKQYVKKTGAKGFVLGISGGQDSTLAGRLAQLAVESIREEGGDAQFIAVRLPHGTQ-QDEDD---AQ   91 (271)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHTCCEEEEECCSSHHHHHHHHHHHHHHHHHHHTTCCCEEEEEECCSSSC-TTHHH---HH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCC-CHHHH---HH
T ss_conf             998999999999999999994998199979888889999999999999887723785223565674443-12336---99


Q ss_pred             HHHHHCCCCEEE-EEEECC-------------CC-----CCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf             999871898899-997504-------------78-----77803788854555543200123442012345666566899
Q gi|254780546|r   75 DVCSRLRIAHSV-VSWKNS-------------KP-----QTGLMAAAREARYALISEHAKTINATLIMTAHTFDDQLETV  135 (423)
Q Consensus        75 ~~~~~lgi~~~~-~~~~~~-------------~~-----~~~~~~~ar~~r~~~~~~~~~~~~~~~l~~ah~~dD~~Et~  135 (423)
                      ..++.+++.+.+ +.+...             ..     ..|+++   +.|-..+...+...+..++.||+--..     
T Consensus        92 ~~~~~~~~~~~~~i~I~~~~~~~~~~~~~~~~~~~~~~~~~Niqa---RiR~~~Ly~~An~~g~lvlgTgNksE~-----  163 (271)
T d1kqpa_          92 LALKFIKPDKSWKFDIKSTVSAFSDQYQQETGDQLTDFNKGNVKA---RTRMIAQYAIGGQEGLLVLGTDHAAEA-----  163 (271)
T ss_dssp             HHHHHHCCSEEEECCCHHHHHHHHHHHHHHHSCCCCHHHHHHHHH---HHHHHHHHHHHHHHTCEEBCCCCHHHH-----
T ss_pred             HHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCHHCCCCCC---CCCCCHHHHHHHHCCCCCCCCCCHHHH-----
T ss_conf             999872555404775207877678887776521433100012100---035203677675149866788632655-----


Q ss_pred             HHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCHHCCCHHHHHHHHHHHCCC
Q ss_conf             9986236544433223576410035796871012104289999989981893
Q gi|254780546|r  136 YMRSQRDYAEKGMGLSGMCDTILYDLNLWISRPFLRCRREDIRSFLLQRNIS  187 (423)
Q Consensus       136 l~rl~r~sg~~g~~l~~~~~~~~~~~~~~i~RPLL~~~r~~l~~~~~~~~i~  187 (423)
                          ..|-...            .+.+.-=+-|+-++.|.++++.++..|++
T Consensus       164 ----~~Gy~Tk------------yGD~~~di~Pi~dL~K~eV~~La~~lgip  199 (271)
T d1kqpa_         164 ----VTGFFTK------------YGDGGADLLPLTGLTKRQGRTLLKELGAP  199 (271)
T ss_dssp             ----TTTCSCT------------TTTTCCSBCTTTTCCHHHHHHHHHHTTCC
T ss_pred             ----HCCHHHH------------HHHCCCHHCCCCCCCHHHHHHHHHHHHHC
T ss_conf             ----0014666------------43211001236364778799998753201


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: Adenine nucleotide alpha hydrolase-like
superfamily: Adenine nucleotide alpha hydrolases-like
family: N-type ATP pyrophosphatases
domain: NH3-dependent NAD+-synthetase
species: Bacillus subtilis [TaxId: 1423]