HHsearch alignment for GI: 254780547 and conserved domain: PRK10808

>PRK10808 outer membrane protein A; Reviewed.
Probab=100.00  E-value=2.3e-33  Score=213.72  Aligned_cols=111  Identities=27%  Similarity=0.453  Sum_probs=101.8

Q ss_pred             HHCCEEEEECCCCCCCHHHHHHHHHHHHHHCC--C-EEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEE
Q ss_conf             20310022047522432479999999843025--6-05899997226653333200111337999999998528986069
Q gi|254780547|r   47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK--H-DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRM  123 (160)
Q Consensus        47 ~~~~~v~F~~~s~~L~~~~~~~L~~ia~~l~~--~-~~~i~I~GhtD~~Gs~~yN~~LS~~RA~aV~~~L~~~Gi~~~ri  123 (160)
T Consensus       221 tl~s~v~F~fdss~l~p~~~~~L~~~~~~l~~~~~~~~~i~v~GhtD~~G~~~yN~~LS~~RA~~V~~~l~~~Gi~~~~i  300 (347)
T PRK10808        221 TLKSDVLFNFNKATLKPEGQQALDQLYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQALSERRAQSVVDYLISKGIPADKI  300 (347)
T ss_pred             CCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHE
T ss_conf             12442255157020586689999999999974587765189998369988878879999999999999999869984518


Q ss_pred             EEEEECCCCCCCCCCCHHHH---------HCCCEEEEEEEECC
Q ss_conf             99970744898998787798---------42991899997136
Q gi|254780547|r  124 KVTSYGKEMPSVYGHDEDAY---------AKNRRAIVFLKGCR  157 (160)
Q Consensus       124 ~~~g~G~~~P~~~~~~~~~~---------~~NRRVei~i~~~~  157 (160)
T Consensus       301 ~~~g~Ge~~pva~n~~~~~~~~~~li~c~a~nRRVei~v~g~~  343 (347)
T PRK10808        301 SARGMGESNPVTGNTCDNVKPRAALIDCLAPDRRVEIEVKGIK  343 (347)
T ss_pred             EEEEECCCCCCCCCCCCCCCCCCCHHHCCCCCCCEEEEEEEEE
T ss_conf             9998646688888977022443000102478873899998798