HHsearch alignment of GI: 254780547 and MMDB domain: 2k1s_A_
>2k1s_A (A:) Inner membrane lipoprotein YIAD; abbababab, OMPA, alpha beta, palmitate, transmembrane, structural genomics, PSI-2; NMR {Escherichia coli K12}
Probab=99.96 E-value=2.8e-30 Score=195.44 Aligned_cols=118 Identities=23% Similarity=0.356 Sum_probs=108.2
Q ss_pred HHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCE-EEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC
Q ss_conf 5678752031002204752243247999999984302560-589999722665333320011133799999999852898
Q gi|254780547|r 41 QEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGIS 119 (160)
Q Consensus 41 ~~~~~~~~~~~v~F~~~s~~L~~~~~~~L~~ia~~l~~~~-~~i~I~GhtD~~Gs~~yN~~LS~~RA~aV~~~L~~~Gi~ 119 (160)
.+.....+...++|++||+.|++++...|+.++.+|+.++ .+|.|+||||..|+..|||.||++||++|++||.+.|++
T Consensus 25 ~~~~~i~~~~~v~F~~~s~~l~~~~~~~L~~ia~~L~~~p~~~i~I~Ghtd~~g~~~~N~~LS~~RA~aV~~~l~~~gv~ 104 (149)
T 2k1s_A 25 GDNIILNMPNNVTFDSSSATLKPAGANTLTGVAMVLKEYPKTAVNVIGYTDSTGGHDLNMRLSQQRADSVASALITQGVD 104 (149)
T ss_dssp TTEEEEEEEHHHHBSSSSSCBCHHHHHHHHHHHHHHHHCTTEEEEEEEECCCTTCHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred CCEEEEECCCCEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC
T ss_conf 99999984786066599733698999999988777731887520102241354454332017889999999999981997
Q ss_pred CEEEEEEEECCCCCCCCCCCHHHHHCCCEEEEEEEECCC
Q ss_conf 606999970744898998787798429918999971368
Q gi|254780547|r 120 ASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRA 158 (160)
Q Consensus 120 ~~ri~~~g~G~~~P~~~~~~~~~~~~NRRVei~i~~~~~ 158 (160)
+++|.+.|||+.+|++++++++++++||||||+|....-
T Consensus 105 ~~ri~~~g~G~~~p~~~~~~~~~~~~NRRVei~i~~~~~ 143 (149)
T 2k1s_A 105 ASRIRTQGLGPANPIASNSTAEGKAQNRRVEITLSPLLE 143 (149)
T ss_dssp GGGEEEEECTTTCCSSCSSSHHHHHHHSEEEEEEEECSS
T ss_pred CCCCEEEEECCCCCCCCCCCHHHHHHCCCEEEEEEECCH
T ss_conf 663358996565766899397789744969999961514