HHsearch results for GI: 254780547 and protein with PDBid: 2k1s_A
>2k1s_A Inner membrane lipoprotein YIAD; abbababab, OMPA, alpha beta, palmitate, transmembrane, structural genomics, PSI-2; NMR {Escherichia coli K12}
Probab=99.96 E-value=3.3e-30 Score=194.13 Aligned_cols=111 Identities=24% Similarity=0.391 Sum_probs=103.5
Q ss_pred HHHHHCCEEEEECCCCCCCHHHHHHHHHHHHHHCCC-EEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEE
Q ss_conf 875203100220475224324799999998430256-0589999722665333320011133799999999852898606
Q gi|254780547|r 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASR 122 (160)
Q Consensus 44 ~~~~~~~~v~F~~~s~~L~~~~~~~L~~ia~~l~~~-~~~i~I~GhtD~~Gs~~yN~~LS~~RA~aV~~~L~~~Gi~~~r 122 (160)
....++..|+|++|++.|++++.+.|+.++.+|+.+ ..+|.|+||||..|+..|||.||++||++|++||++.|++++|
T Consensus 28 ~~l~l~~~v~F~~~s~~L~~~~~~~L~~ia~~L~~~~~~~i~I~GhtD~~g~~~~N~~LS~~RA~~V~~~L~~~Gi~~~r 107 (149)
T 2k1s_A 28 IILNMPNNVTFDSSSATLKPAGANTLTGVAMVLKEYPKTAVNVIGYTDSTGGHDLNMRLSQQRADSVASALITQGVDASR 107 (149)
T ss_dssp EEEEEEHHHHBSSSSSCBCHHHHHHHHHHHHHHHHCTTEEEEEEEECCCTTCHHHHHHHHHHHHHHHHHHHHHHTCCGGG
T ss_pred EEEECCCCCEECCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHE
T ss_conf 99986874054299722698899999999999964899579999880786895573689999999999999985999325
Q ss_pred EEEEEECCCCCCCCCCCHHHHHCCCEEEEEEE
Q ss_conf 99997074489899878779842991899997
Q gi|254780547|r 123 MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154 (160)
Q Consensus 123 i~~~g~G~~~P~~~~~~~~~~~~NRRVei~i~ 154 (160)
|.+.|||+++|++++.+++++++||||||+|.
T Consensus 108 l~~~g~G~~~P~~~~~~~~~~~~NRRVei~i~ 139 (149)
T 2k1s_A 108 IRTQGLGPANPIASNSTAEGKAQNRRVEITLS 139 (149)
T ss_dssp EEEEECTTTCCSSCSSSHHHHHHHSEEEEEEE
T ss_pred EEEEEECCCCCCCCCCCHHHHHHCCCEEEEEE
T ss_conf 99999867577799929778973597999997