HHSEARCH alignment of GI: 254780547 and SCOP domain: d2aizp1

Alignment

Probab=99.97  E-value=6.1e-31  Score=197.02  Aligned_cols=104  Identities=40%  Similarity=0.714  Sum_probs=99.6

Q ss_pred             CEEEEECCCCCCCHHHHHHHHHHHHHHCCC-EEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEE
Q ss_conf             100220475224324799999998430256-0589999722665333320011133799999999852898606999970
Q gi|254780547|r   50 DSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSY  128 (160)
Q Consensus        50 ~~v~F~~~s~~L~~~~~~~L~~ia~~l~~~-~~~i~I~GhtD~~Gs~~yN~~LS~~RA~aV~~~L~~~Gi~~~ri~~~g~  128 (160)
                      ..|||++||+.|+++++..|+.++.+|+.+ +.+|.|.||||..|+.+||+.||++||++|++||+++||+++||.+.||
T Consensus        30 ~~I~F~~~s~~L~~~~~~~L~~la~~l~~~~~~~i~I~GhtD~~g~~~~N~~LS~~RA~~V~~~L~~~Gi~~~ri~~~g~  109 (134)
T d2aizp1          30 NTVYFGFDKYDITGEYVQILDAHAAYLNATPAAKVLVEGNTDERGTPEYNIALGQRRADAVKGYLAGKGVDAGKLGTVSY  109 (134)
T ss_dssp             CEEECCTTCCCCCHHHHHHHHHHHHHHHHSTTCCEEEEEECCSSSCHHHHHHHHHHHHHHHHHHHHHTTCCGGGEEEEEC
T ss_pred             CEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEC
T ss_conf             81883799812498899999999999986999689996043433221110137899999999899771875345513775


Q ss_pred             CCCCCCCCCCCHHHHHCCCEEEEEE
Q ss_conf             7448989987877984299189999
Q gi|254780547|r  129 GKEMPSVYGHDEDAYAKNRRAIVFL  153 (160)
Q Consensus       129 G~~~P~~~~~~~~~~~~NRRVei~i  153 (160)
                      |+++|+.++.++++|++||||||+.
T Consensus       110 G~~~P~~~~~~~~~~~~NRRVeiv~  134 (134)
T d2aizp1         110 GEEKPAVLGHDEAAYSKNRRAVLAY  134 (134)
T ss_dssp             TTTSCSSCSCSHHHHHHHSEEEEEC
T ss_pred             CCCCCCCCCCCHHHHHCCCCEEEEC
T ss_conf             4337578891977986239899959

SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Bacillus chorismate mutase-like
superfamily: OmpA-like
family: OmpA-like
domain: Peptidoglycan-associated lipoprotein, PAL, periplasmic domain
species: Haemophilus influenzae [TaxId: 727]