HHSEARCH alignment of GI: 254780547 and SCOP domain: d2hqsc1

Alignment
>d2hqsc1 d.79.7.1 (C:68-173) Peptidoglycan-associated lipoprotein, PAL, periplasmic domain {Escherichia coli [TaxId: 562]}
Probab=99.96  E-value=3.4e-30  Score=192.69  Aligned_cols=103  Identities=45%  Similarity=0.745  Sum_probs=99.2

Q ss_pred             CEEEEECCCCCCCHHHHHHHHHHHHHHCCC-EEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEE
Q ss_conf             100220475224324799999998430256-0589999722665333320011133799999999852898606999970
Q gi|254780547|r   50 DSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSY  128 (160)
Q Consensus        50 ~~v~F~~~s~~L~~~~~~~L~~ia~~l~~~-~~~i~I~GhtD~~Gs~~yN~~LS~~RA~aV~~~L~~~Gi~~~ri~~~g~  128 (160)
                      +.|||++||++|++++...|+.++.+|+.+ +.+|.|+||||..|+.+||+.||++||++|++||++.||++++|.+.||
T Consensus         2 ~~iyF~~~s~~l~~~~~~~L~~l~~~l~~~~~~~i~I~GhtD~~g~~~~N~~LS~~RA~~V~~~L~~~Gi~~~ri~~~g~   81 (106)
T d2hqsc1           2 NIVYFDLDKYDIRSDFAQMLDAHANFLRSNPSYKVTVEGHADERGTPEYNISLGERRANAVKMYLQGKGVSADQISIVSY   81 (106)
T ss_dssp             CEEECCTTCCCCCGGGHHHHHHHHHHHHHCTTCCEEEEECCCSSSCHHHHHHHHHHHHHHHHHHHHHTTCCGGGEEEEEC
T ss_pred             CEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEE
T ss_conf             98994799773898899999999999986899579998433422104666558899876799999866986644899983


Q ss_pred             CCCCCCCCCCCHHHHHCCCEEEEE
Q ss_conf             744898998787798429918999
Q gi|254780547|r  129 GKEMPSVYGHDEDAYAKNRRAIVF  152 (160)
Q Consensus       129 G~~~P~~~~~~~~~~~~NRRVei~  152 (160)
                      |+++|++++.+++++++||||||+
T Consensus        82 G~~~p~~~~~~~~~~~~NRRVeii  105 (106)
T d2hqsc1          82 GKEKPAVLGHDEAAYSKNRRAVLV  105 (106)
T ss_dssp             TTSSCSSCSSSHHHHHHHSEEEEE
T ss_pred             CCCCCCCCCCCHHHHHHCCCEEEE
T ss_conf             564767899097799714949996


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Bacillus chorismate mutase-like
superfamily: OmpA-like
family: OmpA-like
domain: Peptidoglycan-associated lipoprotein, PAL, periplasmic domain
species: Escherichia coli [TaxId: 562]