RPSBLAST alignment of GI: 254780547 and protein with PDBid: 2zf8

>2zf8_A MOTY, component of sodium-driven polar flagellar motor; beta barrel, 2-layer sandwich, flagellum, structural protein; 2.85A {Vibrio alginolyticus} Length = 278

 Score = 96.9 bits (241), Expect = 2e-21
 Identities = 26/116 (22%), Positives = 51/116 (43%), Gaps = 2/116 (1%)

Query: 40  LQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD--CDFLIEGHADELGSRNS 97
           L+  F       + ++     +  A  + LS +  ++  +      L+  + D    +++
Sbjct: 152 LKYSFEDIAFTILHYERQGDQLTKASKKRLSQIADYIRHNQDIDLVLVATYTDSTDGKSA 211

Query: 98  SIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
           S +L  RRA ++ +YF + G+   R++V  YGK  P           KNRR ++ L
Sbjct: 212 SQSLSERRAESLRDYFQSLGLPEDRIQVQGYGKRRPIADNGSPIGKDKNRRVVISL 267