RPSBLAST alignment of GI: 254780547 and SCOP domain: d1r1ma_

Alignment
>d1r1ma_ d.79.7.1 (A:) Outer membrane protein class 4, RmpM, C-terminal domain {Neisseria meningitidis [TaxId: 487]} Length = 140
 Score = 72.2 bits (176), Expect = 2e-14
 Identities = 31/113 (27%), Positives = 43/113 (38%), Gaps = 1/113 (0%)

Query: 47  SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHADELGSRNSSIALGLRR 105
           S+     F     S+R      L  L   L +       +EGH D +GS   + AL  RR
Sbjct: 9   SLSAKTLFGFDKDSLRAEAQDNLKVLAQRLSRTNIQSVRVEGHTDFMGSDKYNQALSERR 68

Query: 106 AYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRA 158
           AY V N  V+ G+  SR+     G+    +    E   AK    +   K   A
Sbjct: 69  AYVVANNLVSNGVPVSRISAVGLGESQAQMTQVCEAEVAKLGAKVSKAKKREA 121

SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Bacillus chorismate mutase-like
superfamily: OmpA-like
family: OmpA-like
domain: Outer membrane protein class 4, RmpM, C-terminal domain
species: Neisseria meningitidis [TaxId: 487]