HHsearch alignment for GI: 254780548 and conserved domain: COG3490

Probab=95.40  E-value=0.17  Score=27.13  Aligned_cols=187  Identities=15%  Similarity=0.137  Sum_probs=90.2

Q ss_pred             CEEEEEECCCCCEEEEE-EECC-CCCEEEEEECCCCCE-EEEEEECCCCCCCCCEEEECCCCCEEEEECCCCCEE--EEE
Q ss_conf             10012311455402688-6217-640234557689984-899850346764430377117971799743798524--445
Q gi|254780548|r  190 KNSLCVMDRDGANIRYL-TPSR-DQILFEPRFSPNQQK-VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL--APR  264 (447)
Q Consensus       190 ~~~l~i~d~DG~n~~~l-~~~~-~~~~~sP~wSpDG~~-Iay~s~~~~~~~~i~~~~~~~g~~~~~~~~~~~~~~--~p~  264 (447)
T Consensus        48 s~g~a~~~eaGk~v~~~~lpaR~Hgi----~~~p~~~ravafAR---rPGtf~~vfD~~~~~~pv~~~s~~~RHfyGHGv  120 (366)
T COG3490          48 SFGAATLSEAGKIVFATALPARGHGI----AFHPALPRAVAFAR---RPGTFAMVFDPNGAQEPVTLVSQEGRHFYGHGV  120 (366)
T ss_pred             CEEEEEECCCCCEEEEEECCCCCCCE----ECCCCCCCEEEEEE---CCCCEEEEECCCCCCCCEEEECCCCCEEECCCC
T ss_conf             44378872577166533041003770----21788751379971---687269998777775767874466763512421


Q ss_pred             ECCCCCEEEEEECCCCC---EEEEEEECCCCCCCCCCCCCCCC---CCEEEECCCCEEEEEEC------CCCC-------
Q ss_conf             51589556774137873---03899840477411002577643---20255216747899723------7765-------
Q gi|254780548|r  265 FSSNGKRALISVQKDEA---MDIYSVDLQSNATERLTNTLFIN---ISASYSPDSSQIVFESD------REGK-------  325 (447)
Q Consensus       265 wSPDG~~la~~~s~~g~---~~I~~~d~~~~~~~~lT~~~~~d---~~p~~spDG~~I~f~Sd------r~G~-------  325 (447)
T Consensus       121 fs~dG~~LYATE-ndfd~~rGViGvYd~r-~~fqrvgE~~t~GiGpHev~lm~DGrtlvvanGGIethpdfgR~~lNlds  198 (366)
T COG3490         121 FSPDGRLLYATE-NDFDPNRGVIGVYDAR-EGFQRVGEFSTHGIGPHEVTLMADGRTLVVANGGIETHPDFGRTELNLDS  198 (366)
T ss_pred             CCCCCCEEEEEC-CCCCCCCCEEEEEECC-CCCCEECCCCCCCCCCCEEEEECCCCEEEEECCCEECCCCCCCCCCCHHH
T ss_conf             179875799522-7877787448998520-00002123346776821158835986899957864405555754234322


Q ss_pred             --CCEEEEEE-CCCCCCEEEEEC---CCCEEEEEECCCCCEEEEEECCCC-C---EEEEEEECCCCCEEEE
Q ss_conf             --33157640-256741112203---530000468776888999971499-1---5799998899967996
Q gi|254780548|r  326 --EQLYVMQS-NGSDQKRISQDK---EASYFDPVWSPQGDLIAFTKFSGE-K---FAIGVMKKDGSQERLL  386 (447)
Q Consensus       326 --~qiy~~~~-~g~~~~rlT~~~---~~~~~~p~wSPdG~~Iaf~~~~~~-~---~~i~~~~~~g~~~~~l  386 (447)
T Consensus       199 MePSlvlld~atG~liekh~Lp~~l~~lSiRHld~g~dgtv-wfgcQy~G~~~d~ppLvg~~~~g~~l~~~  268 (366)
T COG3490         199 MEPSLVLLDAATGNLIEKHTLPASLRQLSIRHLDIGRDGTV-WFGCQYRGPRNDLPPLVGHFRKGEPLEFL  268 (366)
T ss_pred             CCCCEEEEECCCCCHHHHCCCCHHHHHCCEEEEEECCCCCE-EEEEEEECCCCCCCCCEEECCCCCCCCCC
T ss_conf             58517998412554122113765553202444543799838-98777107876687400121589867225