HHsearch alignment for GI: 254780548 and conserved domain: COG5354

Probab=98.44  E-value=3.9e-05  Score=51.43  Aligned_cols=138  Identities=12%  Similarity=0.183  Sum_probs=63.5

Q ss_pred             EEEECCCCCEEEEEE---ECCCCC----CCCCEEEECCCCCEEEEECCCCCEEEEEECCCCCEEEEEE-CCCCCEEEEEE
Q ss_conf             455768998489985---034676----4430377117971799743798524445515895567741-37873038998
Q gi|254780548|r  216 EPRFSPNQQKVAYAT---YDDEDI----LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV-QKDEAMDIYSV  287 (447)
Q Consensus       216 sP~wSpDG~~Iay~s---~~~~~~----~~i~~~~~~~g~~~~~~~~~~~~~~~p~wSPDG~~la~~~-s~~g~~~I~~~  287 (447)
T Consensus       227 qLkW~~~g~~ll~l~~t~~ksnKsyfgesnLyl~~~~-e~~i~V~~~~~~pVhdf~W~p~S~~F~vi~g~~pa--~~s~~  303 (561)
T COG5354         227 QLKWQVLGKYLLVLVMTHTKSNKSYFGESNLYLLRIT-ERSIPVEKDLKDPVHDFTWEPLSSRFAVISGYMPA--SVSVF  303 (561)
T ss_pred             EEEEECCCCEEEEEEEEEEECCCCEECCCEEEEEEEC-CCCCCEECCCCCCCEEEEECCCCCCEEEEECCCCC--CEEEC
T ss_conf             8998237866999998754036623324347998511-46532021566651145544568844688525631--03321


Q ss_pred             ECCCCCCCCCCCCCCCCCCEEEECCCCEEEEEE--CCCCCCCEEEEEECCCCCCEE-EEECCCCEEEEEECCCCCEEE
Q ss_conf             404774110025776432025521674789972--377653315764025674111-220353000046877688899
Q gi|254780548|r  288 DLQSNATERLTNTLFINISASYSPDSSQIVFES--DREGKEQLYVMQSNGSDQKRI-SQDKEASYFDPVWSPQGDLIA  362 (447)
Q Consensus       288 d~~~~~~~~lT~~~~~d~~p~~spDG~~I~f~S--dr~G~~qiy~~~~~g~~~~rl-T~~~~~~~~~p~wSPdG~~Ia  362 (447)
T Consensus       304 ~lr~Nl~~~~Pe~~--rNT~~fsp~~r~il~agF~nl~gn--i~i~~~~~rf~-~~~~~~~~-n~s~~~wspd~qF~~  375 (561)
T COG5354         304 DLRGNLRFYFPEQK--RNTIFFSPHERYILFAGFDNLQGN--IEIFDPAGRFK-VAGAFNGL-NTSYCDWSPDGQFYD  375 (561)
T ss_pred             CCCCCEEEECCCCC--CCCCCCCCCCCEEEEECCCCCCCC--EEEECCCCCEE-EEEEEECC-CCEEEECCCCCEEEE
T ss_conf             45654689558766--564012676448999537865353--58862677658-99986137-734740269861798