HHsearch alignment for GI: 254780548 and conserved domain: KOG0296
>KOG0296 consensus.
Probab=98.14 E-value=0.00029 Score=45.65 Aligned_cols=113 Identities=12% Similarity=0.135 Sum_probs=50.5
Q ss_pred CCCEEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCEEEECCCCCEEEEE-CCCCCEEEEEECCCCCEEEEEEC
Q ss_conf 55402688621764023455768998489985034676443037711797179974-37985244455158955677413
Q gi|254780548|r 199 DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG-NFRSMILAPRFSSNGKRALISVQ 277 (447)
Q Consensus 199 DG~n~~~l~~~~~~~~~sP~wSpDG~~Iay~s~~~~~~~~i~~~~~~~g~~~~~~~-~~~~~~~~p~wSPDG~~la~~~s 277 (447)
T Consensus 95 ~ge~~~eltgHKDSV-t~~~FshdgtlLAT----GdmsG~v~v~~~stg~~~~~~~~e~~die-Wl~WHp~a~il-lAG~ 167 (399)
T KOG0296 95 TGEFAGELTGHKDSV-TCCSFSHDGTLLAT----GDMSGKVLVFKVSTGGEQWKLDQEVEDIE-WLKWHPRAHIL-LAGS 167 (399)
T ss_pred CCCCEEEECCCCCCE-EEEEECCCCEEEEE----CCCCCCEEEEECCCCCEEEEEECCCCCEE-EEEECCCCCEE-EEEC
T ss_conf 876026704778706-89887157518985----67776389998146846888405347348-99743565279-8646
Q ss_pred CCCCEEEEEEECCCCCCCCCCCC-CCCCCCEEEECCCCEEEEEE
Q ss_conf 78730389984047741100257-76432025521674789972
Q gi|254780548|r 278 KDEAMDIYSVDLQSNATERLTNT-LFINISASYSPDSSQIVFES 320 (447)
Q Consensus 278 ~~g~~~I~~~d~~~~~~~~lT~~-~~~d~~p~~spDG~~I~f~S 320 (447)
T Consensus 168 ~DGs--vWmw~ip~~~~~kv~~Gh~~~ct~G~f~pdGKr~~tgy 209 (399)
T KOG0296 168 TDGS--VWMWQIPSQALCKVMSGHNSPCTCGEFIPDGKRILTGY 209 (399)
T ss_pred CCCC--EEEEECCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEE
T ss_conf 8883--89998898532457338999840251537874589995