HHsearch alignment for GI: 254780548 and conserved domain: KOG0305
>KOG0305 consensus.
Probab=98.44 E-value=1.7e-05 Score=53.90 Aligned_cols=213 Identities=15% Similarity=0.205 Sum_probs=107.4
Q ss_pred EECCCCCEEEEEEECCCCCCCCCEEEECCCCCEEEEECC-CCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCC-CCC
Q ss_conf 576899848998503467644303771179717997437-985244455158955677413787303899840477-411
Q gi|254780548|r 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF-RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN-ATE 295 (447)
Q Consensus 218 ~wSpDG~~Iay~s~~~~~~~~i~~~~~~~g~~~~~~~~~-~~~~~~p~wSPDG~~la~~~s~~g~~~I~~~d~~~~-~~~ 295 (447)
T Consensus 184 dWss~-n~la-Val----g~~vylW~~~s~~v-~~l~~~~~~~vtSv~ws~~G~~LavG-~~~g~v~iw--D~~~~k~~~ 253 (484)
T KOG0305 184 DWSSA-NVLA-VAL----GQSVYLWSASSGSV-TELCSFGEELVTSVKWSPDGSHLAVG-TSDGTVQIW--DVKEQKKTR 253 (484)
T ss_pred HCCCC-CEEE-EEE----CCEEEEEECCCCCE-EEEEECCCCCEEEEEECCCCCEEEEE-ECCCEEEEE--EHHHCCCCC
T ss_conf 30347-7389-984----23678870678865-78665488855788987899879896-069759997--535524663
Q ss_pred CCCC-CCC-----------------------------------------CCCCEEEECCCCEEEEEECCCCC-CCEEEEE
Q ss_conf 0025-776-----------------------------------------43202552167478997237765-3315764
Q gi|254780548|r 296 RLTN-TLF-----------------------------------------INISASYSPDSSQIVFESDREGK-EQLYVMQ 332 (447)
Q Consensus 296 ~lT~-~~~-----------------------------------------~d~~p~~spDG~~I~f~Sdr~G~-~qiy~~~ 332 (447)
T Consensus 254 ~~~~~h~~rvg~laW~~~~lssGsr~~~I~~~dvR~~~~~~~~~~~H~qeVCgLkws~d~~~lA--S--GgnDN~~~Iwd 329 (484)
T KOG0305 254 TLRGSHASRVGSLAWNSSVLSSGSRDGKILNHDVRISQHVVSTLQGHRQEVCGLKWSPDGNQLA--S--GGNDNVVFIWD 329 (484)
T ss_pred CCCCCCCCEEEEEECCCCEEEEECCCCCEEEEEEECCHHHHHHHHCCCCEEEEEEECCCCCEEC--C--CCCCCCEEECC
T ss_conf 1467767516898626745787137776799887340665556523131156658878788434--6--78865148616
Q ss_pred ECCCCCC-EEEEECCCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCEE-EEECCCCCCCCEECCCCCEEEEEEEE
Q ss_conf 0256741-112203530000468776888999971499157999988999679-96627875543788789989999950
Q gi|254780548|r 333 SNGSDQK-RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER-LLVEDSNLQAPTWSPSGRSLIFSRKK 410 (447)
Q Consensus 333 ~~g~~~~-rlT~~~~~~~~~p~wSPdG~~Iaf~~~~~~~~~i~~~~~~g~~~~-~lt~~~~~e~P~wSPDG~~i~f~~~~ 410 (447)
T Consensus 330 ~~~~~p~~~~~-~H~aAVKA~awcP~q~~lLAsGGGs~D~~i~fwn~~~g~~i~~vdtgsQVcsL~Wsk~~kEi~sthG~ 408 (484)
T KOG0305 330 GLSPEPKFTFT-EHTAAVKALAWCPWQSGLLATGGGSADRCIKFWNTNTGARIDSVDTGSQVCSLIWSKKYKELLSTHGY 408 (484)
T ss_pred CCCCCCCEEEE-CCCEEEEEEEECCCCCCCEEECCCCCCCEEEEEECCCCCEECCCCCCCCEEEEEECCCCCEEEEECCC
T ss_conf 88866768882-13200667764787668067748876627999875788275443368856557985778878873077
Q ss_pred CCCCCEEEEEEECCCCCEEECCCCCCCCCCCCCCCC
Q ss_conf 898733799998899714733678873675316557
Q gi|254780548|r 411 DGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGFM 446 (447)
Q Consensus 411 ~g~~~~~l~~~~~~G~~~~~~~~~g~~~~P~WsP~~ 446 (447)
T Consensus 409 s-~n~i~lw~~ps~~~~~~l~gH~~RVl~la~SPdg 443 (484)
T KOG0305 409 S-ENQITLWKYPSMKLVAELLGHTSRVLYLALSPDG 443 (484)
T ss_pred C-CCCEEEEECCCCCEEEEECCCCCEEEEEEECCCC
T ss_conf 8-8838999656644110002776516998888898