HHsearch alignment for GI: 254780548 and conserved domain: PRK01029
>PRK01029 tolB translocation protein TolB; Provisional.
Probab=100.00 E-value=0 Score=701.86 Aligned_cols=399 Identities=20% Similarity=0.301 Sum_probs=334.0
Q ss_pred HHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEEECCCCCC--C---CHHHHHHHHHHHHHHCCCCEEECCHHHCCC
Q ss_conf 99999999999872021331699997158664200463056775--3---035789999998620175145508655034
Q gi|254780548|r 15 INLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSI--D---ELGGKVSEVVSKDLQRSDVFNLISQDSFKQ 89 (447)
Q Consensus 15 ~~l~l~l~l~~~~~~~~a~A~~~i~It~~~~~pi~IAv~~f~~~--~---~~~~~i~~ii~~DL~~SG~F~~i~~~~~~~ 89 (447)
T Consensus 5 ~~~~~~l~~~~~~~~~~~~~~l~v~v-~~~~~~~Pi~va~~~~~~~~~~~~~~~~l~~v~~~dl~~~~~~~~~~~~~--- 80 (425)
T PRK01029 5 LCFLRFLICFLCLLPSLYAEDLEVHV-RSESSLLPIEVSLLTSPKDPKQQSYLASLRDIFAKDLALGDLLAPTKESA--- 80 (425)
T ss_pred HHHHHHHHHHHHHHHHHHHHEEEEEE-CCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC---
T ss_conf 68999999999985576362189997-37873616799813687773125689999999864210022004455568---
Q ss_pred CCCCCCCCCCHHHHHHCCCCEEEEEEEEECCCCEEEEEEEE-ECCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 66761114577887415621899999740466225789998-41555420000232337778899999998999997504
Q gi|254780548|r 90 KITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL-WDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITG 168 (447)
Q Consensus 90 ~~~~~~~~~~f~~W~~~gad~lv~G~i~~~~~~~~~v~~~L-~dv~~~~~i~~~~~~~~~~~~R~~ah~~ad~i~~~ltG 168 (447)
T Consensus 81 -p~~-----i~~~~~~~~~~------------------~~l~~~~~~~~~~~~~~~~g~~~~~R~~aH~iaD~Iye~lTG 136 (425)
T PRK01029 81 -PLT-----IAIEAHYPELV------------------FSLKKSTKNPQKIFSLELSGDLSKDRQKIHEAADTIHYALTG 136 (425)
T ss_pred -CCC-----HHHCCCCCCEE------------------EEEECCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHCC
T ss_conf -653-----00013566579------------------995205627748876897169358899999999999998619
Q ss_pred CCCCCCCCEEEEEECCCCCCC--CEEEEEECCCCCEEEEEEECCCCCEEEEEECCCCCEEE--EEEECCCCCCCCCEEEE
Q ss_conf 455554417887513676442--10012311455402688621764023455768998489--98503467644303771
Q gi|254780548|r 169 EKGDFNSRILFVSESVVSGII--KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA--YATYDDEDILRVYLMDT 244 (447)
Q Consensus 169 ~~G~f~triafv~~~~~~~~~--~~~l~i~d~DG~n~~~l~~~~~~~~~sP~wSpDG~~Ia--y~s~~~~~~~~i~~~~~ 244 (447)
T Consensus 137 ~~G~F~TRIaYV~~~~~~~~~~~~~~L~i~D~DG~N~~~lt~~~~~-ilSP~wSPdG~~ia~~YvSf~~g~-p~Iyi~dL 214 (425)
T PRK01029 137 VPGISSGKIVFSLSSTNSDQELKQGELWSVDYDGENLRPLTQEHSL-SVTPTWMHIGSNFPYLYVSYKYGV-PKIFLGSL 214 (425)
T ss_pred CCCCCCCEEEEEEEECCCCCCCCEEEEEEECCCCCCCEEECCCCCC-EEECCCCCCCCCCEEEEEECCCCC-CEEEEEEC
T ss_conf 9865425399998277877761026699947889987770279971-474124689883159999657898-56999917
Q ss_pred CCCCCEEEEECCCCCEEEEEECCCCCEEEEEECCCCCEEEEEEE--CCCC----CCCCCCCCCCCCCCEEEECCCCEEEE
Q ss_conf 17971799743798524445515895567741378730389984--0477----41100257764320255216747899
Q gi|254780548|r 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD--LQSN----ATERLTNTLFINISASYSPDSSQIVF 318 (447)
Q Consensus 245 ~~g~~~~~~~~~~~~~~~p~wSPDG~~la~~~s~~g~~~I~~~d--~~~~----~~~~lT~~~~~d~~p~~spDG~~I~f 318 (447)
T Consensus 215 ~tg~r-~~v~~f~G~n~aP~fSPDG~~lA~~ls~~Gn~dIY~~~~~l~t~~~g~~~r~lt~~~~IdtsPswSPDG~~I~F 293 (425)
T PRK01029 215 ENTEG-KKVLALQGNQFMPTFSPRKKLLAFISDAYGNPDLFLQSFSLATGAMGKPRRLLNEAFGTQGNPSFSPDGTKLVF 293 (425)
T ss_pred CCCCE-EEEECCCCCEECCCCCCCCCEEEEEECCCCCCCEEEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCCCEEEE
T ss_conf 88726-89752699400740889998899999889984467875024334356522740357775678638799999999
Q ss_pred EECCCCCCCEEEEEECC--CCCCEEEEECCCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCEEEEECCCCC-CCC
Q ss_conf 72377653315764025--674111220353000046877688899997149915799998899967996627875-543
Q gi|254780548|r 319 ESDREGKEQLYVMQSNG--SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL-QAP 395 (447)
Q Consensus 319 ~Sdr~G~~qiy~~~~~g--~~~~rlT~~~~~~~~~p~wSPdG~~Iaf~~~~~~~~~i~~~~~~g~~~~~lt~~~~~-e~P 395 (447)
T Consensus 294 tSDR~G~PQIY~m~~d~~~~~~rr~t~~~~~~-~~P~wSPdG~~Iaf~~~~~G~f~I~v~dl~~g~~~~LT~~~~d~EsP 372 (425)
T PRK01029 294 VSNKDGRPRIYIMQIDPEPQTPRLLTKKYRNS-SCPAWSPDGKKIAFCSVIKGVRQICIYDLSSGRDYQLTTSPINKESP 372 (425)
T ss_pred EECCCCCCEEEEEEECCCCCCEEEEECCCCCC-CCCEECCCCCEEEEEEEECCCEEEEEEECCCCCEEEEECCCCCCCCC
T ss_conf 96899994289997078888538984368863-57257789998999995289268999989999638971689977386
Q ss_pred EECCCCCEEEEEEEECCCCCEEEEEEECCCCCEEECC-CCCCCCCCCCCCCCC
Q ss_conf 7887899899999508987337999988997147336-788736753165579
Q gi|254780548|r 396 TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN-TPAYASDPQWVGFMD 447 (447)
Q Consensus 396 ~wSPDG~~i~f~~~~~g~~~~~l~~~~~~G~~~~~~~-~~g~~~~P~WsP~~~ 447 (447)
T Consensus 373 SwsPNGr~Ivfas~~~G~--~~L~~vs~dG~~~~rL~~~~G~~rePaWspf~~ 423 (425)
T PRK01029 373 SWAIDSNHLVYSAGNSNE--SELYLLSLITKKTNKIVIGSGEKRFPSWGAFPS 423 (425)
T ss_pred CCCCCCCEEEEEECCCCC--EEEEEEECCCCEEEECCCCCCCCCCCCCCCCCC
T ss_conf 598898689999778997--799999888981787668998757887788887