HHsearch alignment for GI: 254780548 and conserved domain: PRK01742
>PRK01742 tolB translocation protein TolB; Provisional.
Probab=100.00 E-value=0 Score=838.40 Aligned_cols=422 Identities=23% Similarity=0.364 Sum_probs=388.3
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEECCHHHCCC
Q ss_conf 76799999999999998720213316999971586642004630567753035789999998620175145508655034
Q gi|254780548|r 10 ELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQ 89 (447)
Q Consensus 10 ~~~m~~~l~l~l~l~~~~~~~~a~A~~~i~It~~~~~pi~IAv~~f~~~~~~~~~i~~ii~~DL~~SG~F~~i~~~~~~~ 89 (447)
T Consensus 1 m~m~~~~~~~~~~l~~~~~~~~a~a~L~I~It~G~~~~~pIAi~pF~~~~~~~~~i~~vI~~DL~~SG~F~~i~~~~~~~ 80 (430)
T PRK01742 1 MKLLKRLVSVFAVLFAVISNAFAGDEVRIVIDEGVDGARPIAVVPFKWNGSAPEDIAKIIAADLRNSGKFNPIAVSQMPQ 80 (430)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHCCC
T ss_conf 91699999999999999877850575599994576774045992536789766789999987776084726259667445
Q ss_pred CCCCCCCCCCHHHHHHCCCCEEEEEEEEECCCCEEEEEEEEECCCC-----CCEECCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 6676111457788741562189999974046622578999841555-----42000023233777889999999899999
Q gi|254780548|r 90 KITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKD-----RKQIIGKKFFSSPASWRKIAHTISDDIYQ 164 (447)
Q Consensus 90 ~~~~~~~~~~f~~W~~~gad~lv~G~i~~~~~~~~~v~~~L~dv~~-----~~~i~~~~~~~~~~~~R~~ah~~ad~i~~ 164 (447)
T Consensus 81 ~p~~~~~-v~~~~W~~lga~~LV~G~v~~~~~-~~~v~f~L~Dv~~~~~~~g~~l~~~~~~~~~~~~R~~aH~iaD~Iye 158 (430)
T PRK01742 81 RPTSASE-VNPEAWSNLGIDAVVVGQVTPSGN-GYSIAYQLVDTVGASGTAGTVLMQNSYTVTNKWLRYGAHTVSDEVFE 158 (430)
T ss_pred CCCCCCC-CCHHHHHHCCCCEEEEEEEEECCC-EEEEEEEEEEEECCCCCCCEEEEEEEEECCHHHHHHHHHHHHHHHHH
T ss_conf 8985033-497788743999999998997599-17999999995101246652886416615889989888999999999
Q ss_pred HHCCCCCCCCCCEEEEEECCCCCCCCEEEEEECCCCCEEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCEEEE
Q ss_conf 75044555544178875136764421001231145540268862176402345576899848998503467644303771
Q gi|254780548|r 165 SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244 (447)
Q Consensus 165 ~ltG~~G~f~triafv~~~~~~~~~~~~l~i~d~DG~n~~~l~~~~~~~~~sP~wSpDG~~Iay~s~~~~~~~~i~~~~~ 244 (447)
T Consensus 159 ~lTG~~G~F~trIayV~~~~~-~~~~~~l~i~D~DG~N~~~l~~~~~-~ilsP~wSPdg~~iaY~S~~~~~-~~iyi~dl 235 (430)
T PRK01742 159 KLTAIRGAFRTRIAYVVQKNG-GSQPYEVRVADYDGYNQFIVNRSAQ-PIMSPAWSPDGQRLAYVSFENKK-SQLVVQDL 235 (430)
T ss_pred HHCCCCCCCEEEEEEEEECCC-CCCEEEEEECCCCCCCEEECCCCCC-CEEEEEECCCCCEEEEEEECCCC-CEEEEEEC
T ss_conf 862987431004999982179-9843799962678998088535797-25720185899889999904999-78999985
Q ss_pred CCCCCEEEEECCCCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEECCCCEEEEEECCCC
Q ss_conf 17971799743798524445515895567741378730389984047741100257764320255216747899723776
Q gi|254780548|r 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324 (447)
Q Consensus 245 ~~g~~~~~~~~~~~~~~~p~wSPDG~~la~~~s~~g~~~I~~~d~~~~~~~~lT~~~~~d~~p~~spDG~~I~f~Sdr~G 324 (447)
T Consensus 236 ~tg~~-~~l~~~~G~n~aP~~SPDG~~la~sls~~G~~dIY~~dl~~~~~~rLT~~~~idt~PswSPDG~~I~F~SdR~G 314 (430)
T PRK01742 236 NSGAR-KVVASFQGHNGAPAFSPDGSRLAFASSKDGVLNIYVMNANGGTPTQLTSGAGNNTEPSWSPDGNSILFTSDRSG 314 (430)
T ss_pred CCCCE-EEECCCCCCCCCCEECCCCCEEEEEECCCCCEEEEEEECCCCCEEECCCCCCCCCCEEECCCCCEEEEEECCCC
T ss_conf 78854-87225798634742999997999998169971489998899960783558998866148789999999938999
Q ss_pred CCCEEEEEECCCCCCEEEEECCCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCEEEEECCCCCCCCEECCCCCEE
Q ss_conf 53315764025674111220353000046877688899997149915799998899967996627875543788789989
Q gi|254780548|r 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL 404 (447)
Q Consensus 325 ~~qiy~~~~~g~~~~rlT~~~~~~~~~p~wSPdG~~Iaf~~~~~~~~~i~~~~~~g~~~~~lt~~~~~e~P~wSPDG~~i 404 (447)
T Consensus 315 ~PQIY~m~~~g~~~~rit~--~~~~-~~~~SpdG~~i~~~~~~----~i~~~dl~tg~~~~lt~~~~dEsPswSPnG~~I 387 (430)
T PRK01742 315 SPQVYRMDASGGGATLVSG--GRGY-SGQISADGKTLVMINGD----NVVKQDLTTGVSEVLSSTFLDESPSISPNGIMI 387 (430)
T ss_pred CCCEEEEECCCCCEEEEEC--CCCC-CCEECCCCCEEEEEECC----CEEEEECCCCCEEECCCCCCCCCCCCCCCCCEE
T ss_conf 9647999689996267626--8874-31288999869999268----578887698977886468888897699998699
Q ss_pred EEEEEECCCCCEEEEEEECCCCCEEECC-CCCCCCCCCCCCCC
Q ss_conf 9999508987337999988997147336-78873675316557
Q gi|254780548|r 405 IFSRKKDGDTGSKLYSIDLNGRNETLIN-TPAYASDPQWVGFM 446 (447)
Q Consensus 405 ~f~~~~~g~~~~~l~~~~~~G~~~~~~~-~~g~~~~P~WsP~~ 446 (447)
T Consensus 388 vf~s~~gg~~--~l~~vs~dG~~~~rl~~~~G~~~~PaWSP~L 428 (430)
T PRK01742 388 IYSSTQGLGK--VLQLVSADGRFKARLPGSDGQVKFPAWSPYL 428 (430)
T ss_pred EEEECCCCCC--EEEEEECCCCEEEECCCCCCCCCCCCCCCCC
T ss_conf 9998669982--6999994798248766899873687755774