HHsearch alignment for GI: 254780548 and conserved domain: PRK03629
>PRK03629 tolB translocation protein TolB; Provisional.
Probab=100.00 E-value=0 Score=326.57 Aligned_cols=217 Identities=16% Similarity=0.275 Sum_probs=109.0
Q ss_pred CEEEEEEECCCC--CCCCCEEEECCCCCEEEEECCCCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCC
Q ss_conf 848998503467--644303771179717997437985244455158955677413787303899840477411002577
Q gi|254780548|r 224 QKVAYATYDDED--ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301 (447)
Q Consensus 224 ~~Iay~s~~~~~--~~~i~~~~~~~g~~~~~~~~~~~~~~~p~wSPDG~~la~~~s~~g~~~I~~~d~~~~~~~~lT~~~ 301 (447)
T Consensus 165 TrIayV~~~~~~~~~~~L~i~D~D-G~N~~~l~~~~~~ilsP~wSPdg~~iaY~S~~~g~p~iyi~dL~tg~~~~~~~~~ 243 (430)
T PRK03629 165 TRIAYVVQTNGGQFPYELRVSDYD-GYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASFP 243 (430)
T ss_pred CEEEEEEECCCCCCEEEEEEECCC-CCCCEEEECCCCCEEEEEECCCCCEEEEEEECCCCCEEEEEECCCCCEEEECCCC
T ss_conf 159999951799742799997788-9986881058972054208389998999982279963999986678479931446
Q ss_pred CCCCCEEEECCCCEEEEEECCCCCCCEEEEEECCCCCCEEEEECCCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCC
Q ss_conf 64320255216747899723776533157640256741112203530000468776888999971499157999988999
Q gi|254780548|r 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381 (447)
Q Consensus 302 ~~d~~p~~spDG~~I~f~Sdr~G~~qiy~~~~~g~~~~rlT~~~~~~~~~p~wSPdG~~Iaf~~~~~~~~~i~~~~~~g~ 381 (447)
T Consensus 244 g~n~aP~~SPDG~~la~sls~~Gn~dIY~~dl~~~~~~rLT~~~~i-dt~PswSPDG~~I~F~SdR~G~PQIY~m~~~g~ 322 (430)
T PRK03629 244 RHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSN-NTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGG 322 (430)
T ss_pred CCCCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCEEEEEECCCC-CCCCEECCCCCEEEEEECCCCCCEEEEEECCCC
T ss_conf 7666765998998999999568980599999999957898742687-888128478888999978999961999989999
Q ss_pred CEEEEEC-CCCCCCCEECCCCCEEEEEEEECCCCCEEEEEEECCCCCEEECCCCCCCCCCCCCC
Q ss_conf 6799662-78755437887899899999508987337999988997147336788736753165
Q gi|254780548|r 382 QERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444 (447)
Q Consensus 382 ~~~~lt~-~~~~e~P~wSPDG~~i~f~~~~~g~~~~~l~~~~~~G~~~~~~~~~g~~~~P~WsP 444 (447)
T Consensus 323 ~~~RiTf~g~~n~~p~wSPdG~~Iaf~~~~~g~f--~I~~~d~~~~~~~~lt~~~~dEsPswsP 384 (430)
T PRK03629 323 APQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQ--HIAKQDLATGGVQVLSSTFLDETPSLAP 384 (430)
T ss_pred CEEEEECCCCCCCCCCCCCCCCEEEEEEECCCEE--EEEEEECCCCCEEECCCCCCCCCCCCCC
T ss_conf 8898632699756763667899899999329837--9999968999779802799888976999