HHsearch alignment for GI: 254780548 and conserved domain: PRK04792
>PRK04792 tolB translocation protein TolB; Provisional.
Probab=100.00 E-value=0 Score=873.83 Aligned_cols=426 Identities=25% Similarity=0.430 Sum_probs=388.5
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEEECCCC--CCCCHHHHHHHHHHHHHHCCCCEEECCHHHCCC
Q ss_conf 799999999999998720213316999971586642004630567--753035789999998620175145508655034
Q gi|254780548|r 12 NMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFV--SIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQ 89 (447)
Q Consensus 12 ~m~~~l~l~l~l~~~~~~~~a~A~~~i~It~~~~~pi~IAv~~f~--~~~~~~~~i~~ii~~DL~~SG~F~~i~~~~~~~ 89 (447)
T Consensus 1 M~k~~~-~~l~lll~~~s~~A~A~L~IeIt~G~~~~~PIAV~pF~~~g~~~~~~~i~~II~~DL~rSG~F~~l~~~~~~~ 79 (450)
T PRK04792 1 MLKRLI-LGLFVLLLSFSQVANAALELVITDGIDSARPIAIVPFKWEGEGKLPTDISAVIASDLQRSGKFSPVPTSKMPQ 79 (450)
T ss_pred CCHHHH-HHHHHHHHHHHHHHEEEEEEEEECCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCEECCHHHCCC
T ss_conf 938999-9999999986575202499999547777425499375456874325799999998876087855259667445
Q ss_pred CCCCCCCCCCHHHHHHCCCCEEEEEEEEECCCCEEEEEEEEECCCCCCE---------------------ECCCCCCCCH
Q ss_conf 6676111457788741562189999974046622578999841555420---------------------0002323377
Q gi|254780548|r 90 KITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQ---------------------IIGKKFFSSP 148 (447)
Q Consensus 90 ~~~~~~~~~~f~~W~~~gad~lv~G~i~~~~~~~~~v~~~L~dv~~~~~---------------------i~~~~~~~~~ 148 (447)
T Consensus 80 ~P~~~~~-v~f~dWr~lgad~LV~G~v~~~~~g~~~V~f~L~DV~~g~~~~g~~~~~~~~g~~v~~~~~~~~~~~~~~~~ 158 (450)
T PRK04792 80 TPYSESE-INFDAWTKMGVDALLTGSVTQNAEGKYVVNYQLVDVVRGQLTKGQSKALSDDGQLVLSKDHVLFNKVATVSA 158 (450)
T ss_pred CCCCCCC-CCHHHHHHCCCCEEEEEEEEECCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEECCCEECCCH
T ss_conf 8885478-377897643898899999998899749999999980165104553212244432112321000020210477
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCEEEEEECCCCCEEEEEEECCCCCEEEEEECCCCCEEEE
Q ss_conf 78899999998999997504455554417887513676442100123114554026886217640234557689984899
Q gi|254780548|r 149 ASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY 228 (447)
Q Consensus 149 ~~~R~~ah~~ad~i~~~ltG~~G~f~triafv~~~~~~~~~~~~l~i~d~DG~n~~~l~~~~~~~~~sP~wSpDG~~Iay 228 (447)
T Consensus 159 ~~~R~~aH~isD~Iy~~lTG~~G~F~trIayV~~~~-~~~~~~~L~i~D~DG~N~~~lt~~~~-~~lsP~wSPdg~~iaY 236 (450)
T PRK04792 159 PRMREYAHRISDLVYEQLTGERGAFLTRIAYVVVND-KDKYPYQLRVADYDGYNERLVLRSKQ-PLMSPAWSPDGKKLAY 236 (450)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECC-CCCCEEEEEECCCCCCCCEECCCCCC-EEEEEEECCCCCEEEE
T ss_conf 899999999999999997099753010499999348-88863799973678888179027997-2774338589998999
Q ss_pred EEECCCCCCCCCEEEECCCCCEEEEECCCCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCEE
Q ss_conf 85034676443037711797179974379852444551589556774137873038998404774110025776432025
Q gi|254780548|r 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308 (447)
Q Consensus 229 ~s~~~~~~~~i~~~~~~~g~~~~~~~~~~~~~~~p~wSPDG~~la~~~s~~g~~~I~~~d~~~~~~~~lT~~~~~d~~p~ 308 (447)
T Consensus 237 vs~~~g~-p~iyi~dl~tg~~-~~i~~~~g~n~aP~fSPdG~~la~~ls~~G~~dIY~~dl~~~~~~rlT~~~~idt~Ps 314 (450)
T PRK04792 237 VSFQNGQ-AEIFIMNIYTGKR-EKITSYPRHNGAPRFSPDGKKLALVLSKTGSLQVYTLDLKTRKLTQITRGRSNNTEPF 314 (450)
T ss_pred EEECCCC-CEEEEEECCCCCE-EEEECCCCCCCCCCCCCCCCEEEEEEECCCCEEEEEEECCCCCEEEECCCCCCCCCCC
T ss_conf 9953998-5799998878978-8740157766578708999889999836997348999889994587125788787700
Q ss_pred EECCCCEEEEEECCCCCCCEEEEEECCCCCCEEEEECCCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCEEEEEC
Q ss_conf 52167478997237765331576402567411122035300004687768889999714991579999889996799662
Q gi|254780548|r 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388 (447)
Q Consensus 309 ~spDG~~I~f~Sdr~G~~qiy~~~~~g~~~~rlT~~~~~~~~~p~wSPdG~~Iaf~~~~~~~~~i~~~~~~g~~~~~lt~ 388 (447)
T Consensus 315 wSPDG~~i~F~SdR~G~PQIY~~~~~g~~~~RlT~~g~~n-~~p~~SPdG~~Iaf~~~~~g~f~I~v~~~~~~~~~~lt~ 393 (450)
T PRK04792 315 WHPDGKSLIFTSDRGGKPQIYRVNLSDGSTKRLTWQGSQN-LGGQITPDGRFLVMVNRSDSGFNLAKQDLETGAVQVLTK 393 (450)
T ss_pred CCCCCCEEEEEECCCCCCEEEEEECCCCCEEEEECCCCCC-CCCCCCCCCCEEEEEEEECCCEEEEEEECCCCCEEEECC
T ss_conf 8789988999907899961899988999613432369987-676187889989999815890589999479997698027
Q ss_pred CCCCCCCEECCCCCEEEEEEEECCCCCEEEEEEECCCCCEEEC-CCCCCCCCCCCCCCC
Q ss_conf 7875543788789989999950898733799998899714733-678873675316557
Q gi|254780548|r 389 DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI-NTPAYASDPQWVGFM 446 (447)
Q Consensus 389 ~~~~e~P~wSPDG~~i~f~~~~~g~~~~~l~~~~~~G~~~~~~-~~~g~~~~P~WsP~~ 446 (447)
T Consensus 394 ~~~dEsPswsPnGr~ivf~s~~~g~~--~l~~vs~dG~~~~~l~~~~g~~~~PaWsP~l 450 (450)
T PRK04792 394 TLLDESPSIAPNGGMVIYSSIYNKKN--VLSMVSIDGRFKARLPATNGRVRAPAWSPFL 450 (450)
T ss_pred CCCCCCCCCCCCCCEEEEEECCCCCC--EEEEEEECCCEEEECCCCCCCCCCCCCCCCC
T ss_conf 98787977999986899998679970--8999993488037756899875688876889