HHsearch alignment for GI: 254780548 and conserved domain: PRK04922
>PRK04922 tolB translocation protein TolB; Provisional.
Probab=100.00 E-value=2.8e-45 Score=320.30 Aligned_cols=219 Identities=19% Similarity=0.308 Sum_probs=156.1
Q ss_pred CCEEEEEEECCCC---CCCCCEEEECCCCCEEEEECCCCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCC
Q ss_conf 9848998503467---6443037711797179974379852444551589556774137873038998404774110025
Q gi|254780548|r 223 QQKVAYATYDDED---ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299 (447)
Q Consensus 223 G~~Iay~s~~~~~---~~~i~~~~~~~g~~~~~~~~~~~~~~~p~wSPDG~~la~~~s~~g~~~I~~~d~~~~~~~~lT~ 299 (447)
T Consensus 167 ~TrIayV~~~g~~~~~~~~L~i~D~D-G~N~~~lt~~~~~ilsP~wSPdg~~iaYvS~~~g~p~iyi~dl~tg~~~~l~~ 245 (439)
T PRK04922 167 WTRIAYVTASGSGGAMRYALMVADSD-GYNPQTIVRSAEPLLSPNWSPDGKKLAYVSFERGNSSIYLQDIATGARELVSS 245 (439)
T ss_pred EEEEEEEEECCCCCCCEEEEEEECCC-CCCEEEECCCCCCEEEEEECCCCCEEEEEECCCCCCCEEEEECCCCCEEECCC
T ss_conf 23699998017888725999985778-99718922689826842476899889999802798747999867885785045
Q ss_pred CCCCCCCEEEECCCCEEEEEECCCCCCCEEEEEECCCCCCEEEEECCCCEEEEEECCCCCEEEEEECCCCCEEEEEEECC
Q ss_conf 77643202552167478997237765331576402567411122035300004687768889999714991579999889
Q gi|254780548|r 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379 (447)
Q Consensus 300 ~~~~d~~p~~spDG~~I~f~Sdr~G~~qiy~~~~~g~~~~rlT~~~~~~~~~p~wSPdG~~Iaf~~~~~~~~~i~~~~~~ 379 (447)
T Consensus 246 ~~g~n~aP~~SPDG~~ia~sls~~Gn~dIy~~~l~~~~~~rlT~~~~i-dt~Ps~sPDG~~i~F~SdR~G~pQIY~~~~~ 324 (439)
T PRK04922 246 FRGINGAPSFSPDGRRLALALSRSGNPEIYVMDLGSKQLTQLTNHFGI-DTEPTWAPDGGSIYFTSDRGGRPQIYQVAAS 324 (439)
T ss_pred CCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCEEEEECCCCC-CCCEEECCCCCEEEEEECCCCCCEEEEEECC
T ss_conf 788754776989991999999169971028996899852564117886-6771487798889997068999549999899
Q ss_pred CCCEEEEE-CCCCCCCCEECCCCCEEEEEEEECCCCCEEEEEEECCC-C-CEEECCCCCCCCCCCCCCC
Q ss_conf 99679966-27875543788789989999950898733799998899-7-1473367887367531655
Q gi|254780548|r 380 GSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG-R-NETLINTPAYASDPQWVGF 445 (447)
Q Consensus 380 g~~~~~lt-~~~~~e~P~wSPDG~~i~f~~~~~g~~~~~l~~~~~~G-~-~~~~~~~~g~~~~P~WsP~ 445 (447)
T Consensus 325 g~~~~RlT~~g~yn~~p~wSPdG~~Iaf~~~~~g~--f~I~v~d~~~g~~~~~~lt~g~~dEsPswsPn 391 (439)
T PRK04922 325 GGSANRVTFQGNYNATASVSFDGKKIAVAQGSGNT--YRIAMMDRSLGSPSWSTLSPGSLDESPSFAPN 391 (439)
T ss_pred CCCEEEEECCCCCCCCEEECCCCCEEEEEEEECCE--EEEEEEECCCCCCCEEEECCCCCCCCCCCCCC
T ss_conf 99647875579988880299899989999831884--89999946789744898037887779859999