HHsearch alignment for GI: 254780548 and conserved domain: PRK04922

>PRK04922 tolB translocation protein TolB; Provisional.
Probab=100.00  E-value=2.8e-45  Score=320.30  Aligned_cols=219  Identities=19%  Similarity=0.308  Sum_probs=156.1

Q ss_pred             CCEEEEEEECCCC---CCCCCEEEECCCCCEEEEECCCCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCC
Q ss_conf             9848998503467---6443037711797179974379852444551589556774137873038998404774110025
Q gi|254780548|r  223 QQKVAYATYDDED---ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN  299 (447)
Q Consensus       223 G~~Iay~s~~~~~---~~~i~~~~~~~g~~~~~~~~~~~~~~~p~wSPDG~~la~~~s~~g~~~I~~~d~~~~~~~~lT~  299 (447)
T Consensus       167 ~TrIayV~~~g~~~~~~~~L~i~D~D-G~N~~~lt~~~~~ilsP~wSPdg~~iaYvS~~~g~p~iyi~dl~tg~~~~l~~  245 (439)
T PRK04922        167 WTRIAYVTASGSGGAMRYALMVADSD-GYNPQTIVRSAEPLLSPNWSPDGKKLAYVSFERGNSSIYLQDIATGARELVSS  245 (439)
T ss_pred             EEEEEEEEECCCCCCCEEEEEEECCC-CCCEEEECCCCCCEEEEEECCCCCEEEEEECCCCCCCEEEEECCCCCEEECCC
T ss_conf             23699998017888725999985778-99718922689826842476899889999802798747999867885785045


Q ss_pred             CCCCCCCEEEECCCCEEEEEECCCCCCCEEEEEECCCCCCEEEEECCCCEEEEEECCCCCEEEEEECCCCCEEEEEEECC
Q ss_conf             77643202552167478997237765331576402567411122035300004687768889999714991579999889
Q gi|254780548|r  300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD  379 (447)
Q Consensus       300 ~~~~d~~p~~spDG~~I~f~Sdr~G~~qiy~~~~~g~~~~rlT~~~~~~~~~p~wSPdG~~Iaf~~~~~~~~~i~~~~~~  379 (447)
T Consensus       246 ~~g~n~aP~~SPDG~~ia~sls~~Gn~dIy~~~l~~~~~~rlT~~~~i-dt~Ps~sPDG~~i~F~SdR~G~pQIY~~~~~  324 (439)
T PRK04922        246 FRGINGAPSFSPDGRRLALALSRSGNPEIYVMDLGSKQLTQLTNHFGI-DTEPTWAPDGGSIYFTSDRGGRPQIYQVAAS  324 (439)
T ss_pred             CCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCEEEEECCCCC-CCCEEECCCCCEEEEEECCCCCCEEEEEECC
T ss_conf             788754776989991999999169971028996899852564117886-6771487798889997068999549999899


Q ss_pred             CCCEEEEE-CCCCCCCCEECCCCCEEEEEEEECCCCCEEEEEEECCC-C-CEEECCCCCCCCCCCCCCC
Q ss_conf             99679966-27875543788789989999950898733799998899-7-1473367887367531655
Q gi|254780548|r  380 GSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG-R-NETLINTPAYASDPQWVGF  445 (447)
Q Consensus       380 g~~~~~lt-~~~~~e~P~wSPDG~~i~f~~~~~g~~~~~l~~~~~~G-~-~~~~~~~~g~~~~P~WsP~  445 (447)
T Consensus       325 g~~~~RlT~~g~yn~~p~wSPdG~~Iaf~~~~~g~--f~I~v~d~~~g~~~~~~lt~g~~dEsPswsPn  391 (439)
T PRK04922        325 GGSANRVTFQGNYNATASVSFDGKKIAVAQGSGNT--YRIAMMDRSLGSPSWSTLSPGSLDESPSFAPN  391 (439)
T ss_pred             CCCEEEEECCCCCCCCEEECCCCCEEEEEEEECCE--EEEEEEECCCCCCCEEEECCCCCCCCCCCCCC
T ss_conf             99647875579988880299899989999831884--89999946789744898037887779859999