HHsearch alignment for GI: 254780548 and conserved domain: PRK05137

>PRK05137 tolB translocation protein TolB; Provisional.
Probab=100.00  E-value=0  Score=326.01  Aligned_cols=217  Identities=21%  Similarity=0.419  Sum_probs=135.9

Q ss_pred             CEEEEEEECCCC---CCCCCEEEECCCCCEEEEECCCCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCC
Q ss_conf             848998503467---64430377117971799743798524445515895567741378730389984047741100257
Q gi|254780548|r  224 QKVAYATYDDED---ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT  300 (447)
Q Consensus       224 ~~Iay~s~~~~~---~~~i~~~~~~~g~~~~~~~~~~~~~~~p~wSPDG~~la~~~s~~g~~~I~~~d~~~~~~~~lT~~  300 (447)
T Consensus       169 TrIayVs~~g~~~~~~~~L~i~D~D-G~n~~~l~~~~~~ilsP~wSPdg~~iaY~S~~~~~p~i~i~dl~tg~~~~~~~~  247 (437)
T PRK05137        169 TRIVYVAESGPKNARVKRLAIMDQD-GANVRYLTDGSSLVLTPRFSPTRQEITYMSYANGRPRVYLLDLETGQRELVGNF  247 (437)
T ss_pred             CEEEEEEECCCCCCCEEEEEEECCC-CCCCEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCEEECCCC
T ss_conf             6089998017888745799998889-998579304787542433858998799999449985799999878988850468


Q ss_pred             CCCCCCEEEECCCCEEEEEECCCCCCCEEEEEECCCCCCEEEEECCCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCC
Q ss_conf             76432025521674789972377653315764025674111220353000046877688899997149915799998899
Q gi|254780548|r  301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG  380 (447)
Q Consensus       301 ~~~d~~p~~spDG~~I~f~Sdr~G~~qiy~~~~~g~~~~rlT~~~~~~~~~p~wSPdG~~Iaf~~~~~~~~~i~~~~~~g  380 (447)
T Consensus       248 ~G~n~ap~~SPdG~~la~~ls~~Gn~dIy~~~l~~~~~~rlT~~~~i-dt~PswSPDG~~i~F~SdR~G~PQIY~~~~~g  326 (437)
T PRK05137        248 PGMTFAPRFSPDGQKVVMSLAQGGNTDIYTMDLRSRTTTRLTDTPAI-DTSPSYSPDGSQIVFESDRSGSPQLYVMNADG  326 (437)
T ss_pred             CCCEECCEECCCCCEEEEEEECCCCCEEEEEECCCCCEEEEEECCCC-CCCCCCCCCCCEEEEEECCCCCCEEEEEECCC
T ss_conf             99520530989998999999148995489998888835898606777-77852679999899996899994499998999


Q ss_pred             CCEEEEEC-CCCCCCCEECCCCCEEEEEEEECCCCCEEEEEEECCCCCEEECCCCCCCCCCCCCC
Q ss_conf             96799662-78755437887899899999508987337999988997147336788736753165
Q gi|254780548|r  381 SQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG  444 (447)
Q Consensus       381 ~~~~~lt~-~~~~e~P~wSPDG~~i~f~~~~~g~~~~~l~~~~~~G~~~~~~~~~g~~~~P~WsP  444 (447)
T Consensus       327 ~~~~RiT~~~g~~~~p~wSPdG~~iaf~~~~~g~--~~I~~~~~~~~~~~~lT~~~~dEsPs~sP  389 (437)
T PRK05137        327 SNPRRISFGGGRYSTPVWSPRGDLIAFTKQGGGQ--FSIGVMKPDGSGERILTSGFLDEGPTWAP  389 (437)
T ss_pred             CCEEEEECCCCCCCCCCCCCCCCEEEEEEECCCE--EEEEEEECCCCCEEEECCCCCCCCCCCCC
T ss_conf             9768865279865773267899989999952984--88999967999769801789888976999