HHsearch alignment for GI: 254780548 and conserved domain: PRK11138
>PRK11138 outer membrane protein assembly complex subunit YfgL; Provisional.
Probab=96.41 E-value=0.062 Score=30.01 Aligned_cols=263 Identities=14% Similarity=0.175 Sum_probs=131.5
Q ss_pred EEEECCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCEEEEEECC-CCCEEEEE
Q ss_conf 99841555420000232337778899999998999997504455554417887513676442100123114-55402688
Q gi|254780548|r 128 FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDR-DGANIRYL 206 (447)
Q Consensus 128 ~~L~dv~~~~~i~~~~~~~~~~~~R~~ah~~ad~i~~~ltG~~G~f~triafv~~~~~~~~~~~~l~i~d~-DG~n~~~l 206 (447)
T Consensus 81 V~a~d~~tG~~~W~~~l~~~~~~~---~~----~~~~~lsgGv~~~~~~-v~vgt~~------G~v~ALda~tG~~~W~~ 146 (394)
T PRK11138 81 VKALDADTGKEIWSVDLSEKDGLW---AS----NKSARLSGGVTAAGGK-VFIGSEK------GLVYALDAEDGEVAWQT 146 (394)
T ss_pred EEEEECCCCCEEEEEECCCCCCCC---CC----CCCCEEEEEEEECCCE-EEEECCC------CEEEEEECCCCCEEEEE
T ss_conf 999985479487687236544433---34----6675076623675989-9999799------88999987799553685
Q ss_pred EECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCEEEECCCCCEEEEE-CCCC----CEEEEEECCCCCEEEEEECCCCC
Q ss_conf 621764023455768998489985034676443037711797179974-3798----52444551589556774137873
Q gi|254780548|r 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG-NFRS----MILAPRFSSNGKRALISVQKDEA 281 (447)
Q Consensus 207 ~~~~~~~~~sP~wSpDG~~Iay~s~~~~~~~~i~~~~~~~g~~~~~~~-~~~~----~~~~p~wSPDG~~la~~~s~~g~ 281 (447)
T Consensus 147 ~-~~~ev~s~P~v~--~g~V~V~t~---d-g~l~ald~~tG~~~W~~~~~~p~ltlrG~ssP~~~~-g-~v~~g-~~~G- 215 (394)
T PRK11138 147 K-VAGEALSRPVVS--DGVVVVHTS---N-GQLQALNEDDGAVKWTVNLDVPSLTLRGESAPATAF-G-GAFVG-TDNG- 215 (394)
T ss_pred E-CCCCEECCCEEC--CCEEEEEEC---C-CEEEEEECCCCCEEEEECCCCCCCCCCCCCCCEEEC-C-EEEEE-CCCC-
T ss_conf 2-798127487323--999999937---9-959998734896887751677761013652327989-9-99997-5899-
Q ss_pred EEEEEEECCCCCCCC---CCCCC---------CCCCCEEEECCCCEEEEEECCCCCCCEEEEEECCCCCCEEEEECCCCE
Q ss_conf 038998404774110---02577---------643202552167478997237765331576402567411122035300
Q gi|254780548|r 282 MDIYSVDLQSNATER---LTNTL---------FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349 (447)
Q Consensus 282 ~~I~~~d~~~~~~~~---lT~~~---------~~d~~p~~spDG~~I~f~Sdr~G~~qiy~~~~~g~~~~rlT~~~~~~~ 349 (447)
T Consensus 216 -~l~al~~~~G~~~We~~v~~~~G~telerl~Dvd~~Pvv~--~~~vy~~s-~~G--~l~Ald~~tG~~~W-~~~~-ss~ 287 (394)
T PRK11138 216 -RVAAVLMEQGQLIWQQRISQPTGATEIDRLVDVDTTPVVV--GGVLYAVA-YNG--NLVALDLRSGQIVW-KREY-SSV 287 (394)
T ss_pred -EEEEEECCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCEEE--CCEEEEEE-CCC--CEEEEEHHCCCEEE-EECC-CCC
T ss_conf -6999999899311202304676766322223443563786--89899983-588--38987731394734-3036-777
Q ss_pred EEEEECCCCCEEEEEECCCCCEEEEEEECCCCCEEEEECC---CCCCCCEECCCCCEEEEEEEECCCCCEEEEEEEC-CC
Q ss_conf 0046877688899997149915799998899967996627---8755437887899899999508987337999988-99
Q gi|254780548|r 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED---SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL-NG 425 (447)
Q Consensus 350 ~~p~wSPdG~~Iaf~~~~~~~~~i~~~~~~g~~~~~lt~~---~~~e~P~wSPDG~~i~f~~~~~g~~~~~l~~~~~-~G 425 (447)
T Consensus 288 ~~~~--v~~~~vyv~~~~~---~l~Ald~~tG~~~W~~~~l~~r~ls~P~~~--g~~v~vg-d~eG----~lh~ld~~tG 355 (394)
T PRK11138 288 NDFA--VDGNRIYLVDQND---RVYALDRRGGVELWSQSDLLHRLLTSPVLY--NGYLVVG-DSEG----YLHWINREDG 355 (394)
T ss_pred CCCE--EECCEEEEEECCC---CEEEEECCCCCEEEECCCCCCCCCCCCEEE--CCEEEEE-CCCC----EEEEEECCCC
T ss_conf 7825--8399899993698---189987589837826354455643388898--9999999-7998----8999998889
Q ss_pred CCEEECCCCC
Q ss_conf 7147336788
Q gi|254780548|r 426 RNETLINTPA 435 (447)
Q Consensus 426 ~~~~~~~~~g 435 (447)
T Consensus 356 ~~v~r~~~~~ 365 (394)
T PRK11138 356 RFVAQQKVDS 365 (394)
T ss_pred CEEEEEECCC
T ss_conf 8999998489