HHsearch alignment for GI: 254780548 and conserved domain: PRK13614

>PRK13614 lipoprotein LpqB; Provisional.
Probab=97.63  E-value=0.0048  Score=37.48  Aligned_cols=164  Identities=16%  Similarity=0.167  Sum_probs=91.7

Q ss_pred             EEEEECCCCCEEEEEEECCCCCCCCCEEEECCCCCEEEEECCCCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCC-
Q ss_conf             3455768998489985034676443037711797179974379852444551589556774137873038998404774-
Q gi|254780548|r  215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-  293 (447)
Q Consensus       215 ~sP~wSpDG~~Iay~s~~~~~~~~i~~~~~~~g~~~~~~~~~~~~~~~p~wSPDG~~la~~~s~~g~~~I~~~d~~~~~-  293 (447)
T Consensus       346 ~s~a~s~~~~~~A~v~~---~~~~l~~~~--~g~~~~~~~~g~-~Lt~PSwD~~g-~v-W~ad~~~~~~~~~~~~~g~~~  417 (573)
T PRK13614        346 ASPAESPVSQTVAFLNG---ADTTLYTVS--PGQPARRLTSGS-TLTRPSFSPQD-WV-WTAGPGASGRIHAYQPTGTAE  417 (573)
T ss_pred             CCCEECCCCCEEEEECC---CCCEEEEEC--CCCCCEEEECCC-CCCCCCCCCCC-CE-EEECCCCCCEEEEECCCCCCC
T ss_conf             65223567735999868---885789724--897304763388-65687186999-87-981169985078734787655


Q ss_pred             ---CCC--CCCC--CC-CCCCEEEECCCCEEEEEECCCCCCCEEEEEE---CCCCCCEEEEEC----CCCEEEEEECCCC
Q ss_conf             ---110--0257--76-4320255216747899723776533157640---256741112203----5300004687768
Q gi|254780548|r  294 ---TER--LTNT--LF-INISASYSPDSSQIVFESDREGKEQLYVMQS---NGSDQKRISQDK----EASYFDPVWSPQG  358 (447)
Q Consensus       294 ---~~~--lT~~--~~-~d~~p~~spDG~~I~f~Sdr~G~~qiy~~~~---~g~~~~rlT~~~----~~~~~~p~wSPdG  358 (447)
T Consensus       418 g~~~~~v~~~~~wl~g~~I~~lrvSrDG~R~Avv~~~~g~~~l~v~~IvR~~~G~p~~L~~p~~~~~~~~v~~~sW~g~-  496 (573)
T PRK13614        418 GAQAPTVTLTADWLRGRTVKSLRVSREGSRALVISENNGKSSVQVTGIVRNEDGTPRELTAPNTLLADVAVDTGQWVGS-  496 (573)
T ss_pred             CCCCCCEEECCCCCCCCEEEEEEECCCCCEEEEEEEECCCEEEEEEEEEECCCCCEEEECCCEECCCCCCCEEEEECCC-
T ss_conf             6656531304665689777899978886479999974893189999999899995135034410355676101177179-


Q ss_pred             CEEEEEE-CCCCCEEEEEEECCCCCEEEEE
Q ss_conf             8899997-1499157999988999679966
Q gi|254780548|r  359 DLIAFTK-FSGEKFAIGVMKKDGSQERLLV  387 (447)
Q Consensus       359 ~~Iaf~~-~~~~~~~i~~~~~~g~~~~~lt  387 (447)
T Consensus       497 ~~LvVl~~~~~~~~q~~~v~~~g~~~~~l~  526 (573)
T PRK13614        497 STVAVTALSATSNVVPELLSVAAHYPQQLA  526 (573)
T ss_pred             CEEEEEECCCCCCEEEEEEECCCCCCCCCC
T ss_conf             889999436898134799966787756678