HHsearch alignment for GI: 254780548 and conserved domain: PRK13615

>PRK13615 lipoprotein LpqB; Provisional.
Probab=97.28  E-value=0.013  Score=34.60  Aligned_cols=159  Identities=13%  Similarity=0.178  Sum_probs=64.9

Q ss_pred             EEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEECCCCEEEEEECCCCCCCEEEEEECCCCCCEE
Q ss_conf             44551589556774137873038998404774110025776432025521674789972377653315764025674111
Q gi|254780548|r  262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI  341 (447)
Q Consensus       262 ~p~wSPDG~~la~~~s~~g~~~I~~~d~~~~~~~~lT~~~~~d~~p~~spDG~~I~f~Sdr~G~~qiy~~~~~g~~~~rl  341 (447)
T Consensus       313 a~~vs~dg~~~a~~~~-~~---~~~~~~~~~~~~~~~~~~~-Lt~PS~D~~G~--vWt~d~~~~~~l~~~~~~g-~~~~v  384 (532)
T PRK13615        313 AATLSADGRQAAVRNA-SG---VWSVGDGDRDAVLLDTRPG-LVAPSLDAQGY--VWSTPASDPRGLVAWGPDG-VGHPV  384 (532)
T ss_pred             CCEECCCCCEEEEECC-CC---EEEECCCCCCCEEECCCCC-CCCCCCCCCCC--EEEECCCCCCEEEEECCCC-CEEEE
T ss_conf             6256468756999848-73---0895148743056326887-55762879998--7973279981389987898-60699


Q ss_pred             E--EECCCCEEEEEECCCCCEEEEEECCCCCEE--EEEEECCCCCEEEEEC--------CCCCCCCEECCCCCEEEEEEE
Q ss_conf             2--203530000468776888999971499157--9999889996799662--------787554378878998999995
Q gi|254780548|r  342 S--QDKEASYFDPVWSPQGDLIAFTKFSGEKFA--IGVMKKDGSQERLLVE--------DSNLQAPTWSPSGRSLIFSRK  409 (447)
Q Consensus       342 T--~~~~~~~~~p~wSPdG~~Iaf~~~~~~~~~--i~~~~~~g~~~~~lt~--------~~~~e~P~wSPDG~~i~f~~~  409 (447)
T Consensus       385 ~v~~l~~~~V~slrVS~DG~RiAvv~~~~~~~~l~v~~I~Rd~G~p~~l~~~pi~l~a~~~~~~~~sW~g~s~l~Vl~r~  464 (532)
T PRK13615        385 AVSWTATGRVVSLEVARDGARVLVQLETGAGPQLLVASIVRDGGVPTSLTTTPLELLASPGTPLDATWVDELDVATLTLA  464 (532)
T ss_pred             ECCCCCCCEEEEEEECCCCCEEEEEEEECCCCEEEEEEEEECCCCCCCCCEEEEEECCCCCCEEEEEEECCCEEEEEEEC
T ss_conf             64368896699999888875899999849953899999993799887422035650478885335698579779999722


Q ss_pred             ECCCCCEEEEEEECCCCCEEE
Q ss_conf             089873379999889971473
Q gi|254780548|r  410 KDGDTGSKLYSIDLNGRNETL  430 (447)
Q Consensus       410 ~~g~~~~~l~~~~~~G~~~~~  430 (447)
T Consensus       465 ~gg~--~qv~~~~v~G~~~~~  483 (532)
T PRK13615        465 PDGE--RQVELHQVGGPSKDM  483 (532)
T ss_pred             CCCC--EEEEEEECCCCCCCC
T ss_conf             7982--469999679854556