HHsearch alignment for GI: 254780548 and conserved domain: TIGR02171
>TIGR02171 Fb_sc_TIGR02171 Fibrobacter succinogenes paralogous family TIGR02171.
Probab=98.22 E-value=1.6e-05 Score=54.09 Aligned_cols=178 Identities=20% Similarity=0.327 Sum_probs=97.0
Q ss_pred EEEEEECCCCCEEEEEEC---CCCCEEEEEEECCC--CCCCCCC-CCCCCCCCEEE--ECCCC-EEEEEECCCCCC----
Q ss_conf 244455158955677413---78730389984047--7411002-57764320255--21674-789972377653----
Q gi|254780548|r 260 ILAPRFSSNGKRALISVQ---KDEAMDIYSVDLQS--NATERLT-NTLFINISASY--SPDSS-QIVFESDREGKE---- 326 (447)
Q Consensus 260 ~~~p~wSPDG~~la~~~s---~~g~~~I~~~d~~~--~~~~~lT-~~~~~d~~p~~--spDG~-~I~f~Sdr~G~~---- 326 (447)
T Consensus 367 vyHPDISPDG~~VAFCT~~EG~~GkS~vYVR~Ln~~G~~LVKL~VEnAAI---PRWrV~EnGDTvIVYV~dA~nNKDd~~ 443 (982)
T TIGR02171 367 VYHPDISPDGKKVAFCTGIEGVDGKSEVYVRDLNASGSGLVKLDVENAAI---PRWRVLENGDTVIVYVSDASNNKDDAE 443 (982)
T ss_pred EECCCCCCCCCEEEEECCCCCCCCCCEEEEECCCCCCCCCEEECCCCCCC---CCEEECCCCCEEEEEECCCCCCCHHHH
T ss_conf 20274079868745763411447874389844555789812206457437---840567998879999701667861899
Q ss_pred ----CEEEEEECC---CCCCEEEEECCCC------------------------------EEEEEECC-------------
Q ss_conf ----315764025---6741112203530------------------------------00046877-------------
Q gi|254780548|r 327 ----QLYVMQSNG---SDQKRISQDKEAS------------------------------YFDPVWSP------------- 356 (447)
Q Consensus 327 ----qiy~~~~~g---~~~~rlT~~~~~~------------------------------~~~p~wSP------------- 356 (447)
T Consensus 444 F~~~STW~VpFa~GKFG~P~KL-fDGAYHGGVs~~~~lAVsGarLLRa~v~~~G~~~~~~~D~vWYNdGdegEQACNaSL 522 (982)
T TIGR02171 444 FAAESTWQVPFANGKFGKPKKL-FDGAYHGGVSEDKRLAVSGARLLRARVAKEGKVVAKGKDDVWYNDGDEGEQACNASL 522 (982)
T ss_pred HHHCCCEEEECCCCCCCCHHHH-CCCCCCCCCCCCCCEEEHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCHHHCCCH
T ss_conf 9834880775078887861232-053413650147622320356668887017871135413788615887210200013
Q ss_pred --CCC-EEEEEECCC---CCE---------EEEEEECCCCCEEEEEC--CCCCCCCEECC-------CCCEEEEEEEECC
Q ss_conf --688-899997149---915---------79999889996799662--78755437887-------8998999995089
Q gi|254780548|r 357 --QGD-LIAFTKFSG---EKF---------AIGVMKKDGSQERLLVE--DSNLQAPTWSP-------SGRSLIFSRKKDG 412 (447)
Q Consensus 357 --dG~-~Iaf~~~~~---~~~---------~i~~~~~~g~~~~~lt~--~~~~e~P~wSP-------DG~~i~f~~~~~g 412 (447)
T Consensus 523 akDGs~RTLFLDFGG~TG~~Fvg~kYgvHERlLVaDS~GkLV~~vaaP~GytFDHtEWV~GmlnGe~~N~aVAtLtn~nG 602 (982)
T TIGR02171 523 AKDGSKRTLFLDFGGSTGRAFVGQKYGVHERLLVADSKGKLVRAVAAPAGYTFDHTEWVLGMLNGERSNLAVATLTNVNG 602 (982)
T ss_pred HCCCCCCEEEEECCCCCCHHHHCCCCCCEEEEEEECCCCCEEEEECCCCCCCCCCHHHEEEEECCCCCCEEEEEEECCCC
T ss_conf 20776732688568861045404775102244563147761332267888884411320212147885479996626866
Q ss_pred CCCEEEEEEECCCCCEEECCCCCCCCCCCCCCCC
Q ss_conf 8733799998899714733678873675316557
Q gi|254780548|r 413 DTGSKLYSIDLNGRNETLINTPAYASDPQWVGFM 446 (447)
Q Consensus 413 ~~~~~l~~~~~~G~~~~~~~~~g~~~~P~WsP~~ 446 (447)
T Consensus 603 a-H~KiALiNl~~~~v~eLVEGdEL----WHPcL 631 (982)
T TIGR02171 603 A-HKKIALINLSDSKVTELVEGDEL----WHPCL 631 (982)
T ss_pred C-CCEEEEEECCCCCEEEEECCCCC----CCCCE
T ss_conf 6-43488998378847998616877----78711