HHsearch alignment for GI: 254780548 and conserved domain: TIGR02658
>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain; InterPro: IPR013476 Methylamine dehydrogenase is a periplasmic enzyme found in Gram-negative methylotrophs . It is induced when grown on methylamine as a growth substrate and catalyses the oxidative deamination of primary amines to their corresponding aldehydes. ; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0042597 periplasmic space.
Probab=96.63 E-value=0.045 Score=30.92 Aligned_cols=256 Identities=16% Similarity=0.230 Sum_probs=147.2
Q ss_pred CCCCCEEEEEECCCCCCCCEEEEEECCCCCEEEEEEECCCCCEEEEEECCCCCEEEEEE--E----CCCCCCCCCEEEEC
Q ss_conf 55441788751367644210012311455402688621764023455768998489985--0----34676443037711
Q gi|254780548|r 172 DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT--Y----DDEDILRVYLMDTR 245 (447)
Q Consensus 172 ~f~triafv~~~~~~~~~~~~l~i~d~DG~n~~~l~~~~~~~~~sP~wSpDG~~Iay~s--~----~~~~~~~i~~~~~~ 245 (447)
T Consensus 16 ~~da~RVyV~DP~~-F~~~~~~y~ID--G~~~~~~G~~D~G~L~N~~vasDG~F~~~a~T~y~RiARGkR~DYvE~~D~~ 92 (360)
T TIGR02658 16 ASDAKRVYVLDPGH-FAAVSTVYTID--GEKARLLGMTDGGKLPNVVVASDGKFLATASTVYSRIARGKRDDYVELIDPQ 92 (360)
T ss_pred CCCCCEEEEECCCC-EEEEEEEEEEE--CCCCCEEEEECCCCCCCCEEECCCCEEEEEEEEEEEECCCCCCCEEEEECCC
T ss_conf 86451689856986-15888999997--7877388861488247626814874676520047651168865328977256
Q ss_pred CCCCEEEEECCCC-------CEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEECCCCEEEE
Q ss_conf 7971799743798-------524445515895567741378730389984047741100257764320255216747899
Q gi|254780548|r 246 IDRAPKRIGNFRS-------MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318 (447)
Q Consensus 246 ~g~~~~~~~~~~~-------~~~~p~wSPDG~~la~~~s~~g~~~I~~~d~~~~~~~~lT~~~~~d~~p~~spDG~~I~f 318 (447)
T Consensus 93 t~~p~ADI~~P~~PRFL~G~~~~~~~L~~d~K~lLF~Q-FsP~PaVG~VDL~~K~F~~~~~vPD--C-Y~IFP~~n~~Ff 168 (360)
T TIGR02658 93 THKPIADIDLPEGPRFLVGVYPRMASLSPDNKTLLFYQ-FSPSPAVGLVDLEGKAFVKMLDVPD--C-YHIFPTANDTFF 168 (360)
T ss_pred CCCEEEEEECCCCCEEEEECCCHHEECCCCCCEEEEEE-CCCCCCEEEEECCCCCEEEEECCCC--C-CEEECCCCCCEE
T ss_conf 57605445678887356741210101355775688983-3888820468847764012213888--6-413067789606
Q ss_pred EECCCCCCCEEEEEECCCCC-CEEE----EECCCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCE---EEEECCC
Q ss_conf 72377653315764025674-1112----20353000046877688899997149915799998899967---9966278
Q gi|254780548|r 319 ESDREGKEQLYVMQSNGSDQ-KRIS----QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE---RLLVEDS 390 (447)
Q Consensus 319 ~Sdr~G~~qiy~~~~~g~~~-~rlT----~~~~~~~~~p~wSPdG~~Iaf~~~~~~~~~i~~~~~~g~~~---~~lt~~~ 390 (447)
T Consensus 169 MHCRDGSL~~~~~~~~G~~~p~k~T~~FH~E~eyL~~~P~YS~~~grLvWPTY~GkIfQ~~Ls~~~a~Fl~~~E~fT~~E 248 (360)
T TIGR02658 169 MHCRDGSLLKVGYDSKGNSKPIKPTKVFHKEDEYLINNPAYSNKSGRLVWPTYEGKIFQIDLSSKDAKFLKAIEAFTDAE 248 (360)
T ss_pred EEECCCCEEEEEECCCCCCCCCCCCEEEECCCCEEEECCCCCCCCCCEECCCCCCEEEEEEECCCCCCCCCHHHHHHHHH
T ss_conf 88015540335555788716653215530756224437633078882664410675899984468751010445533367
Q ss_pred CCCCCEECCCC-CEEEEEEEECC--------------CCCEEEEEEEC-CCCCEEECCCCCC
Q ss_conf 75543788789-98999995089--------------87337999988-9971473367887
Q gi|254780548|r 391 NLQAPTWSPSG-RSLIFSRKKDG--------------DTGSKLYSIDL-NGRNETLINTPAY 436 (447)
Q Consensus 391 ~~e~P~wSPDG-~~i~f~~~~~g--------------~~~~~l~~~~~-~G~~~~~~~~~g~ 436 (447)
T Consensus 249 k--~~~WrPGGWQ~vAyH~~~~~iylL~DQR~~w~H~~~SR~~fV~Da~tGkRl~~iel~HE 308 (360)
T TIGR02658 249 K--KDGWRPGGWQQVAYHKARDEIYLLADQRAKWTHKTASRFLFVVDAKTGKRLRKIELKHE 308 (360)
T ss_pred H--HCCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCCCCEEEEEEECCCCCEEEEEECCEE
T ss_conf 7--55687787322567721473899861200033456512899996787731100211112