HHsearch alignment for GI: 254780548 and conserved domain: pfam06433
>pfam06433 Me-amine-dh_H Methylamine dehydrogenase heavy chain (MADH). Methylamine dehydrogenase (EC:1.4.99.3) a periplasmic quinoprotein found in several methyltrophic bacteria. Induced when grown on methylamine as a carbon source MADH catalyses the oxidative deamination of amines to there corresponding aldehydes. MADH is a hetero- tetramer, comprised of two heavy chains (H) and two light chains (L). The H-chain forms a beta-propeller like structure.
Probab=98.87 E-value=9.1e-06 Score=55.66 Aligned_cols=207 Identities=12% Similarity=0.196 Sum_probs=107.5
Q ss_pred EECCCCCEEEEEEECCCCCCCCCEEEECCCCCEEEEECCCCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCC
Q ss_conf 57689984899850346764430377117971799743798524445515895567741378730389984047741100
Q gi|254780548|r 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297 (447)
Q Consensus 218 ~wSpDG~~Iay~s~~~~~~~~i~~~~~~~g~~~~~~~~~~~~~~~p~wSPDG~~la~~~s~~g~~~I~~~d~~~~~~~~l 297 (447)
T Consensus 101 ~ls~d~k~l~v~N~--TPa~SVsVVDl~~~~~v~-ei~tPGC~~---iyP~~~~~F~~~CgDG~l~~v~ld~~G~~~~~~ 174 (342)
T pfam06433 101 SLTPDNKTLLFYQF--SPSPAVGVVDLEGKAFVR-MMDVPDCYH---IFPTANQTFFMHCRDGSLAQVGYDDKGNTKMKP 174 (342)
T ss_pred EECCCCCEEEEECC--CCCCEEEEEECCCCCEEE-EECCCCEEE---EEECCCCCEEEECCCCCEEEEEECCCCCEEEEC
T ss_conf 23679868999916--887657899876660567-606898789---964689872788379850799837998500302
Q ss_pred CCCCCCC-----CCEEEECCCCEEEEEECCCCCCCEEEEEECCCCCCEEE-EECCCC-EEEEEECCCCCE-EEEEE----
Q ss_conf 2577643-----20255216747899723776533157640256741112-203530-000468776888-99997----
Q gi|254780548|r 298 TNTLFIN-----ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS-QDKEAS-YFDPVWSPQGDL-IAFTK---- 365 (447)
Q Consensus 298 T~~~~~d-----~~p~~spDG~~I~f~Sdr~G~~qiy~~~~~g~~~~rlT-~~~~~~-~~~p~wSPdG~~-Iaf~~---- 365 (447)
T Consensus 175 ~~~F~~~~dplf~~pa~~~~~g~~vf~sy-~G--~V~~~~~s~~~~~~~~~w~~~~~~e~a~~WRPGG~Q~~A~h~~~~~ 251 (342)
T pfam06433 175 TEVFHGEDEYLINHPAYSNKSGRLVWPTY-TG--KIFQADLSSKGAKFLKPIEAFTEAEKADGWRPGGWQQVAYHRARDR 251 (342)
T ss_pred CCCCCCCCCCCCCCCCEECCCCEEEEEEE-CC--EEEEEECCCCCCEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCE
T ss_conf 45436777532436536588877999961-76--6999762777513747713678610025847662151677557880
Q ss_pred ----CC-C-------CCEEEEEEECCCCC-EEEEECCCCCCCCEECCCCCEEEEEEEECCCCCEEEEEEEC-CCCCEEEC
Q ss_conf ----14-9-------91579999889996-79966278755437887899899999508987337999988-99714733
Q gi|254780548|r 366 ----FS-G-------EKFAIGVMKKDGSQ-ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLI 431 (447)
Q Consensus 366 ----~~-~-------~~~~i~~~~~~g~~-~~~lt~~~~~e~P~wSPDG~~i~f~~~~~g~~~~~l~~~~~-~G~~~~~~ 431 (447)
T Consensus 252 lyvlmh~g~~~tHkdpgteVWv~D~~t~krv~ri~L~~~~~si~Vsqd~~P~Lya~s~~~~---~l~v~Da~tgk~~rsi 328 (342)
T pfam06433 252 IYLLADQRAKWTHKTASRFVFVVDATTGKRLRKIELGHEIDSINVSQDAKPLLYALSAGAK---TLFIFDAVTGKELSSV 328 (342)
T ss_pred EEEEECCCCCCCCCCCCEEEEEEECCCCEEEEEECCCCEEEEEEECCCCCCEEEEECCCCC---EEEEEECCCCCEEEEH
T ss_conf 9999737987641389628999988877299985188804479986799845999728996---0899867788636550
Q ss_pred CCCCC
Q ss_conf 67887
Q gi|254780548|r 432 NTPAY 436 (447)
Q Consensus 432 ~~~g~ 436 (447)
T Consensus 329 ~~lG~ 333 (342)
T pfam06433 329 DQLGR 333 (342)
T ss_pred HHCCC
T ss_conf 10477