HHsearch alignment for GI: 254780548 and conserved domain: pfam08662
>pfam08662 eIF2A Eukaryotic translation initiation factor eIF2A. This is a family of eukaryotic translation initiation factors.
Probab=99.09 E-value=4.3e-08 Score=71.24 Aligned_cols=157 Identities=18% Similarity=0.271 Sum_probs=81.9
Q ss_pred EECCCCCEEEEEEC---------CCCCEEEEEEECCCCCCCCCC-CCCCCCCCEEEECCCCEEEEEECCCCCC-CEEEEE
Q ss_conf 55158955677413---------787303899840477411002-5776432025521674789972377653-315764
Q gi|254780548|r 264 RFSSNGKRALISVQ---------KDEAMDIYSVDLQSNATERLT-NTLFINISASYSPDSSQIVFESDREGKE-QLYVMQ 332 (447)
Q Consensus 264 ~wSPDG~~la~~~s---------~~g~~~I~~~d~~~~~~~~lT-~~~~~d~~p~~spDG~~I~f~Sdr~G~~-qiy~~~ 332 (447)
T Consensus 12 ~W~~~G~~llv~~~t~~dkt~ksyyg~~~l~~l~~~~~~~~~v~l~~~gpv~d~~W~P~g~~F~vi~G~--~p~~~~ly~ 89 (194)
T pfam08662 12 KWNKNGTYLLVLVSTDVDKTNKSYYGEFNLYLIGETGGPDEVVELDKEGPIHDFAWSPNGKEFAVIYGY--MPAKITFFD 89 (194)
T ss_pred EECCCCCEEEEEEEEEECCCCCEEECCEEEEEEECCCCEEEEEEECCCCCEEEEEECCCCCEEEEEECC--CCCEEEEEC
T ss_conf 977868999999986354789738143589999379980579981688847999987699889999837--997479994
Q ss_pred ECCCCCCEEEEECCCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCEEEEECC--CCCCCCEECCCCCEEEEEEEE
Q ss_conf 025674111220353000046877688899997149915799998899967996627--875543788789989999950
Q gi|254780548|r 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKK 410 (447)
Q Consensus 333 ~~g~~~~rlT~~~~~~~~~p~wSPdG~~Iaf~~~~~~~~~i~~~~~~g~~~~~lt~~--~~~e~P~wSPDG~~i~f~~~~ 410 (447)
T Consensus 90 ~~~~~i--~~f~~-~~~N~i~wsP~G~~~~lagfgnl~G~l~f~d~~~~--k~i~~~~~~~~t~~~WsPdGr~~~tatt~ 164 (194)
T pfam08662 90 LKGNVI--HSLGE-QPRNTIFWSPFGRLVLLAGFGNLAGQIEFWDVKNK--KKIATAEASNATDCEWSPDGRYFLTATTS 164 (194)
T ss_pred CCCEEE--EEECC-CCCCEEEECCCCCEEEEEECCCCCCEEEEEECCCC--EEEEECCCCCEEEEEECCCCCEEEEEEEC
T ss_conf 761699--98689-87325999999999999877899823999999996--89867154977789998999999999914
Q ss_pred C---CCCCEEEEEEECCCCCEE
Q ss_conf 8---987337999988997147
Q gi|254780548|r 411 D---GDTGSKLYSIDLNGRNET 429 (447)
Q Consensus 411 ~---g~~~~~l~~~~~~G~~~~ 429 (447)
T Consensus 165 pR~~vDNg~kIw~~--~G~ll~ 184 (194)
T pfam08662 165 PRLRVDNGFKIWHY--SGKLVY 184 (194)
T ss_pred CCEEECCCEEEEEE--CCCEEE
T ss_conf 76686088899975--690910