HHsearch alignment for GI: 254780548 and conserved domain: pfam08662
>pfam08662 eIF2A Eukaryotic translation initiation factor eIF2A. This is a family of eukaryotic translation initiation factors.
Probab=98.76 E-value=8.7e-07 Score=62.48 Aligned_cols=139 Identities=18% Similarity=0.237 Sum_probs=56.7
Q ss_pred EECCCCCEEEEEEE-CCCC-------CCCCCEEEECCCCCEEEEE-CCCCCEEEEEECCCCCEEEEEECCCCCEEEEEEE
Q ss_conf 57689984899850-3467-------6443037711797179974-3798524445515895567741378730389984
Q gi|254780548|r 218 RFSPNQQKVAYATY-DDED-------ILRVYLMDTRIDRAPKRIG-NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288 (447)
Q Consensus 218 ~wSpDG~~Iay~s~-~~~~-------~~~i~~~~~~~g~~~~~~~-~~~~~~~~p~wSPDG~~la~~~s~~g~~~I~~~d 288 (447)
T Consensus 12 ~W~~~G~~llv~~~t~~dkt~ksyyg~~~l~~l~~~-~~~~~~v~l~~~gpv~d~~W~P~g~~F~vi~G~-~p~~~~ly~ 89 (194)
T pfam08662 12 KWNKNGTYLLVLVSTDVDKTNKSYYGEFNLYLIGET-GGPDEVVELDKEGPIHDFAWSPNGKEFAVIYGY-MPAKITFFD 89 (194)
T ss_pred EECCCCCEEEEEEEEEECCCCCEEECCEEEEEEECC-CCEEEEEEECCCCCEEEEEECCCCCEEEEEECC-CCCEEEEEC
T ss_conf 977868999999986354789738143589999379-980579981688847999987699889999837-997479994
Q ss_pred CCCCCCCCCCCCCCCCCCEEEECCCCEEEEEEC--CCCCCCEEEEEECCCCCCEEEEECCCCEEEEEECCCCCEEEEE
Q ss_conf 047741100257764320255216747899723--7765331576402567411122035300004687768889999
Q gi|254780548|r 289 LQSNATERLTNTLFINISASYSPDSSQIVFESD--REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364 (447)
Q Consensus 289 ~~~~~~~~lT~~~~~d~~p~~spDG~~I~f~Sd--r~G~~qiy~~~~~g~~~~rlT~~~~~~~~~p~wSPdG~~Iaf~ 364 (447)
T Consensus 90 ~~~~~i~~f~~~~~N--~i~wsP~G~~~~lagfgnl~G--~l~f~d~~--~~k~i~~~~~~~~t~~~WsPdGr~~~ta 161 (194)
T pfam08662 90 LKGNVIHSLGEQPRN--TIFWSPFGRLVLLAGFGNLAG--QIEFWDVK--NKKKIATAEASNATDCEWSPDGRYFLTA 161 (194)
T ss_pred CCCEEEEEECCCCCC--EEEECCCCCEEEEEECCCCCC--EEEEEECC--CCEEEEECCCCCEEEEEECCCCCEEEEE
T ss_conf 761699986898732--599999999999987789982--39999999--9689867154977789998999999999