HHsearch alignment for GI: 254780549 and conserved domain: COG0810

>COG0810 TonB Periplasmic protein TonB, links inner and outer membranes [Cell envelope biogenesis, outer membrane].

Probab=99.75  E-value=4e-17  Score=116.84  Aligned_cols=92  Identities=18%  Similarity=0.131  Sum_probs=76.2

Q ss_pred             HHHHHHHHHHHHHHHHHHCCCCCCCCCCC-CEEEEEEEEECCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf             00007899999999996225465655537-52999999987998185335640588860589999999999999718898
Q gi|254780549|r  172 RIPSQDAIAIVRNRVIANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFR  250 (271)
Q Consensus       172 ~~~~~~~~~~ir~~I~~~w~~p~~~~~~~-~~~v~v~i~l~~~G~v~~~~~~~~~~~~~~~~~~~~~~a~rAi~~~~p~~  250 (271)
T Consensus       149 ~~~~~~~~~~~~~~i~~~~~YP~~A~~~g~~G~V~V~f~i~~~G~v~~v~v~~SSg~-----~~lD~aal~air~~~~~p  223 (244)
T COG0810         149 TGPSASYLSGLRRAIRRAPRYPAQARARGIEGTVKVKFTIDPDGNVTNVRVLKSSGS-----PALDRAALEAIRKWRFKP  223 (244)
T ss_pred             CCCCCCCCHHHHHHHHCCCCCCHHHHHCCCCCEEEEEEEECCCCCEEEEEEEECCCC-----HHHHHHHHHHHHHHCCCC
T ss_conf             665433321468886446787389996778406999999899997845788623896-----788899999999725478


Q ss_pred             CCHHH--HHHCCEEEEEECH
Q ss_conf             88467--7612228997444
Q gi|254780549|r  251 LSPST--YKSWRNITLFFVP  268 (271)
Q Consensus       251 ~p~~~--y~~~~~~~~~F~p  268 (271)
T Consensus       224 ~~p~~~~~~~~i~~~f~f~~  243 (244)
T COG0810         224 PKPGGKKVGIKITIPFKFKL  243 (244)
T ss_pred             CCCCCCCCCEEEEEEEECCC
T ss_conf             88787763358999886068