BLASTP 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= gi|254780549|ref|YP_003064962.1| signal peptide protein
[Candidatus Liberibacter asiaticus str. psy62]
(271 letters)
Database: nr
14,124,377 sequences; 4,842,793,630 total letters
Searching..................................................done
Results from round 1
>gi|254780549|ref|YP_003064962.1| signal peptide protein [Candidatus Liberibacter asiaticus str.
psy62]
gi|254040226|gb|ACT57022.1| signal peptide protein [Candidatus Liberibacter asiaticus str.
psy62]
Length = 271
Score = 553 bits (1424), Expect = e-155, Method: Compositional matrix adjust.
Identities = 271/271 (100%), Positives = 271/271 (100%)
Query: 1 MRLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP 60
MRLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP
Sbjct: 1 MRLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP 60
Query: 61 VVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPV 120
VVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPV
Sbjct: 61 VVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPV 120
Query: 121 SPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIA 180
SPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIA
Sbjct: 121 SPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIA 180
Query: 181 IVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENAR 240
IVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENAR
Sbjct: 181 IVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENAR 240
Query: 241 KAVIKSQAFRLSPSTYKSWRNITLFFVPSKM 271
KAVIKSQAFRLSPSTYKSWRNITLFFVPSKM
Sbjct: 241 KAVIKSQAFRLSPSTYKSWRNITLFFVPSKM 271
>gi|315122877|ref|YP_004063366.1| signal peptide protein [Candidatus Liberibacter solanacearum
CLso-ZC1]
gi|313496279|gb|ADR52878.1| signal peptide protein [Candidatus Liberibacter solanacearum
CLso-ZC1]
Length = 265
Score = 207 bits (527), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 129/275 (46%), Positives = 173/275 (62%), Gaps = 14/275 (5%)
Query: 1 MRLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKY----KK 56
MR+ENGLAIS+ILH +FLLLLY NFNVQL VP+S+ E S+ NI+N+D HS+KY
Sbjct: 1 MRVENGLAISLILHFIFLLLLYLNFNVQLFVPVSKIEGSSIKNIHNDDLHSNKYSGDKNN 60
Query: 57 IEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALL 116
+E V + S++ F Q+N + DQ KT +E K+ S S+GE ALKES+
Sbjct: 61 EKEEVFHSREMSEKTGAHWFEDQQNNSKSFDQGKTQTIPDELKKFSDSEGEHALKESSPP 120
Query: 117 RMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQ 176
+ + P DK++ K NK KK+I + V K++ + SQ
Sbjct: 121 NVSLRPLDKKQHIK--NKAHSQHSTPSIIKKNIAKLPV--------PKIDTKQSRSNFSQ 170
Query: 177 DAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLR 236
+ I IVR R++ NWNIP D K+FKK++VKMHF LN+ GFV+G ++ VVGGTEL RR L
Sbjct: 171 NEIGIVRRRIMGNWNIPPDLKKFKKIQVKMHFSLNRNGFVIGNPDITVVGGTELARRTLV 230
Query: 237 ENARKAVIKSQAFRLSPSTYKSWRNITLFFVPSKM 271
++ARKA IKSQ FRL YK+WRN+T+ F+PSKM
Sbjct: 231 KSARKAFIKSQPFRLPADKYKNWRNMTIHFIPSKM 265
>gi|227823309|ref|YP_002827281.1| putative TolA outer membrane protein [Sinorhizobium fredii NGR234]
gi|227342310|gb|ACP26528.1| putative TolA outer membrane protein [Sinorhizobium fredii NGR234]
Length = 356
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 53/98 (54%), Gaps = 1/98 (1%)
Query: 175 SQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRM 234
SQ + +R ++ NW+I +R+K+ FQL+ G ++G+ V+ GG+E RR
Sbjct: 258 SQSEMDALRGQIQNNWSIIPGMADAADVRIKVTFQLDPNGELIGEPEVEATGGSEAARRA 317
Query: 235 LRENARKAVIKSQAFRLSP-STYKSWRNITLFFVPSKM 271
L AR+AV+KS F P Y SW + + F PS M
Sbjct: 318 LASGARRAVLKSAPFTALPKDKYDSWSEVVVNFDPSSM 355
>gi|222086974|ref|YP_002545508.1| signal peptide protein [Agrobacterium radiobacter K84]
gi|221724422|gb|ACM27578.1| signal peptide protein [Agrobacterium radiobacter K84]
Length = 139
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 54/98 (55%), Gaps = 1/98 (1%)
Query: 175 SQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRM 234
SQ + + +V NWNIP+D K+RV +H +L++ G ++G V GG E R
Sbjct: 40 SQAEMLALHEQVTRNWNIPADLPHANKVRVAVHMKLDRSGQIIGSPEVTATGGPEQTRNA 99
Query: 235 LRENARKAVIKSQAFRLSP-STYKSWRNITLFFVPSKM 271
+ ++A +AV++S F+ P Y +W+ + + F S +
Sbjct: 100 VAKSASRAVLRSAPFKNLPLDKYDAWKEVIINFDTSNL 137
>gi|150397826|ref|YP_001328293.1| putative signal peptide protein [Sinorhizobium medicae WSM419]
gi|150029341|gb|ABR61458.1| conserved hypothetical signal peptide protein [Sinorhizobium
medicae WSM419]
Length = 356
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 53/98 (54%), Gaps = 1/98 (1%)
Query: 175 SQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRM 234
SQ + +R ++ NW+I +R+K+ +L+ G ++G V+ GG++ RR
Sbjct: 258 SQSEMDALRGQIQNNWSIIPGMADAADVRIKVRMRLDPNGELIGDPEVEASGGSDSARRA 317
Query: 235 LRENARKAVIKSQAFRLSPST-YKSWRNITLFFVPSKM 271
L AR+A++KS F+ P+ Y SW + + F PS M
Sbjct: 318 LMGGARRAILKSAPFKGLPAEKYDSWSEVVVNFDPSSM 355
>gi|15966493|ref|NP_386846.1| putative signal peptide protein [Sinorhizobium meliloti 1021]
gi|307300470|ref|ZP_07580250.1| putative signal peptide protein [Sinorhizobium meliloti BL225C]
gi|307318335|ref|ZP_07597770.1| putative signal peptide protein [Sinorhizobium meliloti AK83]
gi|15075764|emb|CAC47319.1| Hypothetical signal peptide protein [Sinorhizobium meliloti 1021]
gi|306896017|gb|EFN26768.1| putative signal peptide protein [Sinorhizobium meliloti AK83]
gi|306904636|gb|EFN35220.1| putative signal peptide protein [Sinorhizobium meliloti BL225C]
Length = 356
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 54/98 (55%), Gaps = 1/98 (1%)
Query: 175 SQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRM 234
SQ + +R ++ NW+I +R+K+ +L+ G ++G+ V+ GG++ RR
Sbjct: 258 SQSEMDALRGQIQNNWSIIPGMADAADVRIKVTMRLDPNGDLIGEPEVEASGGSDAARRA 317
Query: 235 LRENARKAVIKSQAFRLSPST-YKSWRNITLFFVPSKM 271
L AR+A++KS F+ P+ Y SW + + F PS M
Sbjct: 318 LMGGARRAILKSVPFKGLPADKYDSWSEVVVNFDPSSM 355
>gi|163758791|ref|ZP_02165878.1| hypothetical protein HPDFL43_15247 [Hoeflea phototrophica DFL-43]
gi|162284081|gb|EDQ34365.1| hypothetical protein HPDFL43_15247 [Hoeflea phototrophica DFL-43]
Length = 332
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 56/105 (53%)
Query: 167 KSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVG 226
+++R SQ + +R ++ WNI +RV + +L+ G ++G+ +V G
Sbjct: 227 RTTRGNTLSQSEMDALRGQIQRYWNIIPGMADGGDVRVTVKMRLDVSGNIVGQPDVSATG 286
Query: 227 GTELVRRMLRENARKAVIKSQAFRLSPSTYKSWRNITLFFVPSKM 271
G+ R L +A++AV+++Q ++L Y SW + + F PS+M
Sbjct: 287 GSAGTRGTLASSAKRAVLRAQPYQLPAEKYDSWSEVVVNFDPSQM 331
>gi|218662998|ref|ZP_03518928.1| putative TolA outer membrane protein [Rhizobium etli IE4771]
Length = 378
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 49/92 (53%), Gaps = 2/92 (2%)
Query: 182 VRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGG-TELVRRMLRENAR 240
+++ + NW + + +R+K+H L+Q G ++G+ V+ VGG E RR L A
Sbjct: 285 LKSAIAGNWTVIPGMEGMGDVRIKVHMNLDQDGNIVGEPEVEAVGGDNESTRRALAGGAY 344
Query: 241 KAVIKSQAFRLSP-STYKSWRNITLFFVPSKM 271
+A++KS F P Y +W + + F PS +
Sbjct: 345 RAIMKSAPFSSLPKDKYDAWSEVVVNFDPSDL 376
>gi|15891233|ref|NP_356905.1| hypothetical protein Atu3715 [Agrobacterium tumefaciens str. C58]
gi|15159596|gb|AAK89690.1| conserved hypothetical protein [Agrobacterium tumefaciens str. C58]
Length = 384
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 52/98 (53%), Gaps = 1/98 (1%)
Query: 175 SQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRM 234
SQ + +R + NW I +RV++ +L++ G ++G+ ++ GG+E RR
Sbjct: 286 SQTEMDALRGAIQKNWQIIPGMADAADVRVRVTMKLDRDGTIIGRPEIEATGGSEGTRRA 345
Query: 235 LRENARKAVIKSQAFRLSPST-YKSWRNITLFFVPSKM 271
L A +A+++S F P+ Y +W + + F PS++
Sbjct: 346 LSGGAYRAIMRSAPFTNLPADKYDAWNEVVVNFDPSEL 383
>gi|332716444|ref|YP_004443910.1| putative TolA outer membrane protein [Agrobacterium sp. H13-3]
gi|325063129|gb|ADY66819.1| putative TolA outer membrane protein [Agrobacterium sp. H13-3]
Length = 389
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 52/98 (53%), Gaps = 1/98 (1%)
Query: 175 SQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRM 234
SQ + +R + NW I +RV++ +L++ G ++G+ ++ GG+E RR
Sbjct: 291 SQTEMDALRGAIQKNWQIIPGMADASDVRVRVTMKLDRDGSIIGRPEIEATGGSEGTRRA 350
Query: 235 LRENARKAVIKSQAFRLSPST-YKSWRNITLFFVPSKM 271
L A +A+++S F P+ Y +W + + F PS++
Sbjct: 351 LSGGAYRAIMRSAPFTNLPADKYDAWNEVVVNFDPSEL 388
>gi|222149662|ref|YP_002550619.1| hypothetical protein Avi_3620 [Agrobacterium vitis S4]
gi|221736644|gb|ACM37607.1| conserved hypothetical protein [Agrobacterium vitis S4]
Length = 389
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 55/97 (56%), Gaps = 1/97 (1%)
Query: 175 SQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRM 234
SQ + +R + NW++ S + + ++ HF+L++ G ++G+ V GG+ +++
Sbjct: 291 SQSEMDALRGAIQNNWSVLSGMGDAQGMVIRAHFKLDESGNLIGEPEVTATGGSPSAQQV 350
Query: 235 LRENARKAVIKSQAFRLSP-STYKSWRNITLFFVPSK 270
+ +AR+A++KS F+ P Y +W + + F PS+
Sbjct: 351 MISSARRAILKSVPFKNLPVEKYDAWSEVVVNFDPSE 387
>gi|86359055|ref|YP_470947.1| signal peptide protein [Rhizobium etli CFN 42]
gi|86283157|gb|ABC92220.1| probable signal peptide protein [Rhizobium etli CFN 42]
Length = 380
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 52/96 (54%), Gaps = 4/96 (4%)
Query: 175 SQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRM 234
SQ VR+++ +NW++ S ++++++ FQL+Q G V+G V GG E R+
Sbjct: 278 SQSEEDAVRSQISSNWSVVSGLAGASEVQLQVRFQLDQAGNVVGDPEVIATGGPESTRQA 337
Query: 235 LRENARKAVIKSQAFRLSPST-YK---SWRNITLFF 266
L+ + +AV+KS + P+ Y+ W + L F
Sbjct: 338 LKSSVYRAVMKSSPLKNLPADKYEGENGWNEMRLTF 373
>gi|239832784|ref|ZP_04681113.1| TolA protein [Ochrobactrum intermedium LMG 3301]
gi|239825051|gb|EEQ96619.1| TolA protein [Ochrobactrum intermedium LMG 3301]
Length = 356
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 47/97 (48%)
Query: 175 SQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRM 234
SQ + +R + WN+P+ L V + +LNQ G + G V GG + V R
Sbjct: 259 SQSEMDALRGAISKCWNVPAGVADAPGLIVTVKMKLNQDGSIQGVPEVTSGGGGDGVGRA 318
Query: 235 LRENARKAVIKSQAFRLSPSTYKSWRNITLFFVPSKM 271
E+A++AV + + L Y SW + + F PS+M
Sbjct: 319 AAESAKRAVARCAPYNLPVDKYDSWSEVIVNFDPSEM 355
>gi|153008548|ref|YP_001369763.1| TolA protein [Ochrobactrum anthropi ATCC 49188]
gi|151560436|gb|ABS13934.1| TolA protein [Ochrobactrum anthropi ATCC 49188]
Length = 356
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 47/97 (48%)
Query: 175 SQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRM 234
SQ + +R + WN+P+ L V + +LNQ G + G V GG + V R
Sbjct: 259 SQSEMDALRGAISKCWNVPAGVADAPGLVVTVKMKLNQDGSIQGVPEVTSGGGGDGVGRA 318
Query: 235 LRENARKAVIKSQAFRLSPSTYKSWRNITLFFVPSKM 271
E+A++AV + + L Y SW + + F PS+M
Sbjct: 319 AAESAKRAVARCAPYNLPVDKYDSWSEVIVNFDPSEM 355
>gi|116253710|ref|YP_769548.1| TolA outer membrane protein [Rhizobium leguminosarum bv. viciae
3841]
gi|115258358|emb|CAK09461.1| putative TolA outer membrane protein [Rhizobium leguminosarum bv.
viciae 3841]
Length = 379
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 49/100 (49%), Gaps = 3/100 (3%)
Query: 175 SQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVD--VVGGTELVR 232
SQ VR + NW + + + +K+H +L++ G ++G+ V+ ++ R
Sbjct: 278 SQSEEDAVRGLIEGNWLVTPGMEGLSGMVIKVHMKLDKDGNIIGQPEVESSGGSSSDATR 337
Query: 233 RMLRENARKAVIKSQAFRLSP-STYKSWRNITLFFVPSKM 271
R L A +AV+KS F + P Y++W L F PS M
Sbjct: 338 RALEGGAYRAVMKSAPFSMLPKDKYEAWNEFDLNFDPSSM 377
>gi|241206186|ref|YP_002977282.1| outer membrane protein [Rhizobium leguminosarum bv. trifolii
WSM1325]
gi|240860076|gb|ACS57743.1| outer membrane protein [Rhizobium leguminosarum bv. trifolii
WSM1325]
Length = 379
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 49/100 (49%), Gaps = 3/100 (3%)
Query: 175 SQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVD--VVGGTELVR 232
SQ VR + NW + + + +K+H +L++ G ++G+ V+ ++ R
Sbjct: 278 SQSEEDAVRGLIEGNWLVTPGMEGLSGMVIKVHMKLDKDGNIIGQPEVESSGGSSSDATR 337
Query: 233 RMLRENARKAVIKSQAFRLSP-STYKSWRNITLFFVPSKM 271
R L A +AV+KS F + P Y++W L F PS M
Sbjct: 338 RALEGGAYRAVMKSAPFSMLPKDKYEAWNEFDLNFDPSSM 377
>gi|304393325|ref|ZP_07375253.1| TolA protein [Ahrensia sp. R2A130]
gi|303294332|gb|EFL88704.1| TolA protein [Ahrensia sp. R2A130]
Length = 343
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 41/94 (43%), Gaps = 2/94 (2%)
Query: 175 SQDAIAIVRNRVIANWNIP--SDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVR 232
SQ I VR R+ WN+ S K+R + F+LN+ G + G++ G R
Sbjct: 244 SQSTIDAVRGRLSGCWNVAALSGHPDAAKMRATVDFKLNRDGTIDGRVRPKTSGTDGPTR 303
Query: 233 RMLRENARKAVIKSQAFRLSPSTYKSWRNITLFF 266
+L R A+ + L Y +W+ T+ F
Sbjct: 304 AILAVAVRSAIESCAPYNLPADKYDTWKEFTVNF 337
>gi|298292995|ref|YP_003694934.1| TolA [Starkeya novella DSM 506]
gi|296929506|gb|ADH90315.1| putative TolA [Starkeya novella DSM 506]
Length = 320
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 51/98 (52%), Gaps = 2/98 (2%)
Query: 175 SQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRM 234
SQ I +R R++ WN P+ ++L V + +LN G + G V V G+
Sbjct: 221 SQTEIDALRARLMQLWNPPAGAANPEELIVTVRIRLNVDGTLNGPPMV-VTSGSSPFFMT 279
Query: 235 LRENARKAVIKSQAFR-LSPSTYKSWRNITLFFVPSKM 271
R++A +A+ + Q F L P Y++W++I + F P +M
Sbjct: 280 ARDSAIRAIFRGQPFDMLRPEKYEAWKDIEVTFDPREM 317
>gi|110635501|ref|YP_675709.1| TolA, TolA protein [Mesorhizobium sp. BNC1]
gi|110286485|gb|ABG64544.1| Cell division and transport-associated protein TolA [Chelativorans
sp. BNC1]
Length = 351
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 52/97 (53%), Gaps = 1/97 (1%)
Query: 175 SQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRM 234
SQ + +R ++ WN+P+ + LRV + F+L+ G V G+ + + GG V R
Sbjct: 255 SQSEMDALRAQIERCWNVPAGALDAENLRVSVKFKLDPSGAVEGRPEI-IEGGGSGVARA 313
Query: 235 LRENARKAVIKSQAFRLSPSTYKSWRNITLFFVPSKM 271
E+AR+AV++ + L Y +W ++ + F P+ M
Sbjct: 314 AAESARRAVLQCAPYNLPSEKYSAWADVIVHFDPTDM 350
>gi|190893277|ref|YP_001979819.1| outer membrane protein [Rhizobium etli CIAT 652]
gi|190698556|gb|ACE92641.1| outer membrane protein [Rhizobium etli CIAT 652]
Length = 379
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 3/100 (3%)
Query: 175 SQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVD--VVGGTELVR 232
SQ +R+ + NW I + + +K+H +L++ G ++G+ V+ ++ R
Sbjct: 278 SQSEEDAMRSLIEGNWLITPGMEGLSGMVIKVHMKLDRDGNIIGQPEVESSGGSSSDSTR 337
Query: 233 RMLRENARKAVIKSQAFRLSP-STYKSWRNITLFFVPSKM 271
R L A +AV+KS F P Y +W L F PS M
Sbjct: 338 RALESGAYRAVMKSAPFTTLPKDKYDAWNEFDLNFDPSSM 377
>gi|254708712|ref|ZP_05170523.1| hypothetical protein BpinB_00336 [Brucella pinnipedialis B2/94]
gi|254714559|ref|ZP_05176370.1| hypothetical protein BcetM6_14712 [Brucella ceti M644/93/1]
gi|254717456|ref|ZP_05179267.1| hypothetical protein BcetM_13836 [Brucella ceti M13/05/1]
gi|256030238|ref|ZP_05443852.1| hypothetical protein BpinM2_06256 [Brucella pinnipedialis
M292/94/1]
gi|261219287|ref|ZP_05933568.1| TolA protein [Brucella ceti M13/05/1]
gi|261316203|ref|ZP_05955400.1| TolA protein [Brucella pinnipedialis B2/94]
gi|261322348|ref|ZP_05961545.1| TolA protein [Brucella ceti M644/93/1]
gi|265987266|ref|ZP_06099823.1| TolA protein [Brucella pinnipedialis M292/94/1]
gi|260924376|gb|EEX90944.1| TolA protein [Brucella ceti M13/05/1]
gi|261295038|gb|EEX98534.1| TolA protein [Brucella ceti M644/93/1]
gi|261295426|gb|EEX98922.1| TolA protein [Brucella pinnipedialis B2/94]
gi|264659463|gb|EEZ29724.1| TolA protein [Brucella pinnipedialis M292/94/1]
Length = 356
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 47/97 (48%)
Query: 175 SQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRM 234
SQ + +R + WN+P+ L V + +L + G + G V GG + V R
Sbjct: 259 SQSEMDALRGAISKCWNVPAGVADAPGLVVTVKMKLAEDGSIQGTPEVTSGGGADGVARA 318
Query: 235 LRENARKAVIKSQAFRLSPSTYKSWRNITLFFVPSKM 271
E+AR+AV++ + L Y SW + + F PS+M
Sbjct: 319 AAESARRAVMRCAPYNLPVDKYDSWSEVIVNFDPSEM 355
>gi|225853153|ref|YP_002733386.1| hypothetical protein BMEA_A1750 [Brucella melitensis ATCC 23457]
gi|256045308|ref|ZP_05448202.1| hypothetical protein Bmelb1R_12512 [Brucella melitensis bv. 1 str.
Rev.1]
gi|256114266|ref|ZP_05455011.1| hypothetical protein Bmelb3E_15733 [Brucella melitensis bv. 3 str.
Ether]
gi|256263355|ref|ZP_05465887.1| TolA protein [Brucella melitensis bv. 2 str. 63/9]
gi|260565801|ref|ZP_05836284.1| TolA protein [Brucella melitensis bv. 1 str. 16M]
gi|265991733|ref|ZP_06104290.1| TolA protein [Brucella melitensis bv. 1 str. Rev.1]
gi|265995570|ref|ZP_06108127.1| TolA protein [Brucella melitensis bv. 3 str. Ether]
gi|13898975|gb|AAK48917.1|AF358662_4 TolA protein [Brucella melitensis]
gi|225641518|gb|ACO01432.1| Protein TsetseEP precursor [Brucella melitensis ATCC 23457]
gi|260151174|gb|EEW86269.1| TolA protein [Brucella melitensis bv. 1 str. 16M]
gi|262766854|gb|EEZ12472.1| TolA protein [Brucella melitensis bv. 3 str. Ether]
gi|263002689|gb|EEZ15092.1| TolA protein [Brucella melitensis bv. 1 str. Rev.1]
gi|263093354|gb|EEZ17423.1| TolA protein [Brucella melitensis bv. 2 str. 63/9]
gi|326409711|gb|ADZ66776.1| TolA, tolA protein [Brucella melitensis M28]
gi|326539418|gb|ADZ87633.1| protein TsetseEP precursor [Brucella melitensis M5-90]
Length = 356
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 47/97 (48%)
Query: 175 SQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRM 234
SQ + +R + WN+P+ L V + +L + G + G V GG + V R
Sbjct: 259 SQSEMDALRGAISKCWNVPAGVADAPGLVVTVKMKLAEDGSIQGTPEVTSGGGADGVARA 318
Query: 235 LRENARKAVIKSQAFRLSPSTYKSWRNITLFFVPSKM 271
E+AR+AV++ + L Y SW + + F PS+M
Sbjct: 319 AAESARRAVMRCAPYNLPVDKYDSWSEVIVNFDPSEM 355
>gi|260568783|ref|ZP_05839251.1| TolA protein [Brucella suis bv. 4 str. 40]
gi|260154167|gb|EEW89249.1| TolA protein [Brucella suis bv. 4 str. 40]
Length = 356
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 47/97 (48%)
Query: 175 SQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRM 234
SQ + +R + WN+P+ L V + +L + G + G V GG + V R
Sbjct: 259 SQSEMDALRGAISKCWNVPAGVADAPGLVVTVKMKLAEDGSIQGTPEVTSGGGADGVARA 318
Query: 235 LRENARKAVIKSQAFRLSPSTYKSWRNITLFFVPSKM 271
E+AR+AV++ + L Y SW + + F PS+M
Sbjct: 319 AAESARRAVMRCAPYNLPVDKYDSWSEVIVNFDPSEM 355
>gi|62290570|ref|YP_222363.1| TolA protein [Brucella abortus bv. 1 str. 9-941]
gi|82700486|ref|YP_415060.1| hypothetical protein BAB1_1710 [Brucella melitensis biovar Abortus
2308]
gi|237816075|ref|ZP_04595071.1| Protein TsetseEP precursor [Brucella abortus str. 2308 A]
gi|254689866|ref|ZP_05153120.1| hypothetical protein Babob68_06802 [Brucella abortus bv. 6 str.
870]
gi|254694359|ref|ZP_05156187.1| hypothetical protein Babob3T_06812 [Brucella abortus bv. 3 str.
Tulya]
gi|254698017|ref|ZP_05159845.1| hypothetical protein Babob28_09998 [Brucella abortus bv. 2 str.
86/8/59]
gi|254730901|ref|ZP_05189479.1| hypothetical protein Babob42_06837 [Brucella abortus bv. 4 str.
292]
gi|256258120|ref|ZP_05463656.1| hypothetical protein Babob9C_12404 [Brucella abortus bv. 9 str.
C68]
gi|260547186|ref|ZP_05822924.1| TolA protein [Brucella abortus NCTC 8038]
gi|260755397|ref|ZP_05867745.1| TolA protein [Brucella abortus bv. 6 str. 870]
gi|260758619|ref|ZP_05870967.1| TolA protein [Brucella abortus bv. 4 str. 292]
gi|260762451|ref|ZP_05874788.1| TolA protein [Brucella abortus bv. 2 str. 86/8/59]
gi|260884413|ref|ZP_05896027.1| TolA protein [Brucella abortus bv. 9 str. C68]
gi|261214668|ref|ZP_05928949.1| TolA protein [Brucella abortus bv. 3 str. Tulya]
gi|297248969|ref|ZP_06932677.1| hypothetical protein BAYG_03010 [Brucella abortus bv. 5 str. B3196]
gi|62196702|gb|AAX75002.1| TolA, tolA protein [Brucella abortus bv. 1 str. 9-941]
gi|82616587|emb|CAJ11666.1| Proline-rich region:Proline-rich extensin:Histamine H3 receptor
[Brucella melitensis biovar Abortus 2308]
gi|237788738|gb|EEP62950.1| Protein TsetseEP precursor [Brucella abortus str. 2308 A]
gi|260095551|gb|EEW79429.1| TolA protein [Brucella abortus NCTC 8038]
gi|260668937|gb|EEX55877.1| TolA protein [Brucella abortus bv. 4 str. 292]
gi|260672877|gb|EEX59698.1| TolA protein [Brucella abortus bv. 2 str. 86/8/59]
gi|260675505|gb|EEX62326.1| TolA protein [Brucella abortus bv. 6 str. 870]
gi|260873941|gb|EEX81010.1| TolA protein [Brucella abortus bv. 9 str. C68]
gi|260916275|gb|EEX83136.1| TolA protein [Brucella abortus bv. 3 str. Tulya]
gi|297174102|gb|EFH33459.1| hypothetical protein BAYG_03010 [Brucella abortus bv. 5 str. B3196]
Length = 356
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 47/97 (48%)
Query: 175 SQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRM 234
SQ + +R + WN+P+ L V + +L + G + G V GG + V R
Sbjct: 259 SQSEMDALRGAISKCWNVPAGVADAPGLVVTVKMKLAEDGSIQGTPEVTSGGGADGVARA 318
Query: 235 LRENARKAVIKSQAFRLSPSTYKSWRNITLFFVPSKM 271
E+AR+AV++ + L Y SW + + F PS+M
Sbjct: 319 AAESARRAVMRCAPYNLPVDKYDSWSEVIVNFDPSEM 355
>gi|23502556|ref|NP_698683.1| tolA protein [Brucella suis 1330]
gi|161619627|ref|YP_001593514.1| TolA protein [Brucella canis ATCC 23365]
gi|163845277|ref|YP_001622932.1| hypothetical protein BSUIS_B1173 [Brucella suis ATCC 23445]
gi|254700359|ref|ZP_05162187.1| hypothetical protein Bsuib55_05814 [Brucella suis bv. 5 str. 513]
gi|254703476|ref|ZP_05165304.1| hypothetical protein Bsuib36_06042 [Brucella suis bv. 3 str. 686]
gi|256370107|ref|YP_003107618.1| tolA protein [Brucella microti CCM 4915]
gi|261750853|ref|ZP_05994562.1| TolA protein [Brucella suis bv. 5 str. 513]
gi|261754106|ref|ZP_05997815.1| TolA protein [Brucella suis bv. 3 str. 686]
gi|294850949|ref|ZP_06791625.1| hypothetical protein BAZG_03079 [Brucella sp. NVSL 07-0026]
gi|23348556|gb|AAN30598.1| tolA protein [Brucella suis 1330]
gi|161336438|gb|ABX62743.1| TolA protein [Brucella canis ATCC 23365]
gi|163676000|gb|ABY40110.1| Hypothetical protein, conserved [Brucella suis ATCC 23445]
gi|256000270|gb|ACU48669.1| tolA protein [Brucella microti CCM 4915]
gi|261740606|gb|EEY28532.1| TolA protein [Brucella suis bv. 5 str. 513]
gi|261743859|gb|EEY31785.1| TolA protein [Brucella suis bv. 3 str. 686]
gi|294821592|gb|EFG38588.1| hypothetical protein BAZG_03079 [Brucella sp. NVSL 07-0026]
Length = 356
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 47/97 (48%)
Query: 175 SQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRM 234
SQ + +R + WN+P+ L V + +L + G + G V GG + V R
Sbjct: 259 SQSEMDALRGAISKCWNVPAGVADAPGLVVTVKMKLAEDGSIQGTPEVTSGGGADGVARA 318
Query: 235 LRENARKAVIKSQAFRLSPSTYKSWRNITLFFVPSKM 271
E+AR+AV++ + L Y SW + + F PS+M
Sbjct: 319 AAESARRAVMRCAPYNLPVDKYDSWSEVIVNFDPSEM 355
>gi|225628266|ref|ZP_03786300.1| Protein TsetseEP precursor [Brucella ceti str. Cudo]
gi|256160413|ref|ZP_05458102.1| hypothetical protein BcetM4_15504 [Brucella ceti M490/95/1]
gi|256255619|ref|ZP_05461155.1| hypothetical protein BcetB_15323 [Brucella ceti B1/94]
gi|260167913|ref|ZP_05754724.1| tolA protein [Brucella sp. F5/99]
gi|261222822|ref|ZP_05937103.1| TolA protein [Brucella ceti B1/94]
gi|261757351|ref|ZP_06001060.1| TolA protein [Brucella sp. F5/99]
gi|265998781|ref|ZP_06111338.1| TolA protein [Brucella ceti M490/95/1]
gi|225616112|gb|EEH13160.1| Protein TsetseEP precursor [Brucella ceti str. Cudo]
gi|260921406|gb|EEX88059.1| TolA protein [Brucella ceti B1/94]
gi|261737335|gb|EEY25331.1| TolA protein [Brucella sp. F5/99]
gi|262553470|gb|EEZ09239.1| TolA protein [Brucella ceti M490/95/1]
Length = 356
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 47/97 (48%)
Query: 175 SQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRM 234
SQ + +R + WN+P+ L V + +L + G + G V GG + V R
Sbjct: 259 SQSEMDALRGAISKCWNVPAGVADAPGLVVTVKMKLAEDGSIQGTPEVTSGGGADGVARA 318
Query: 235 LRENARKAVIKSQAFRLSPSTYKSWRNITLFFVPSKM 271
E+AR+AV++ + L Y SW + + F PS+M
Sbjct: 319 AAESARRAVMRCAPYNLPVDKYNSWSEVIVNFDPSEM 355
>gi|148559086|ref|YP_001259550.1| tolA protein [Brucella ovis ATCC 25840]
gi|148370343|gb|ABQ60322.1| tolA protein [Brucella ovis ATCC 25840]
Length = 356
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 47/97 (48%)
Query: 175 SQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRM 234
SQ + +R + WN+P+ L V + +L + G + G V GG + V R
Sbjct: 259 SQSEMDALRGAISKCWNVPTGVADAPGLVVTVKMKLAEDGSIQGTPEVTSGGGADGVARA 318
Query: 235 LRENARKAVIKSQAFRLSPSTYKSWRNITLFFVPSKM 271
E+AR+AV++ + L Y SW + + F PS+M
Sbjct: 319 AAESARRAVMRCAPYNLPVDKYDSWSEVIVNFDPSEM 355
>gi|306841417|ref|ZP_07474119.1| tolA protein [Brucella sp. BO2]
gi|306288523|gb|EFM59875.1| tolA protein [Brucella sp. BO2]
Length = 291
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 47/97 (48%)
Query: 175 SQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRM 234
SQ + +R + WN+P+ L V + +L + G + G V GG + V R
Sbjct: 194 SQSEMDALRGAISKCWNVPAGVADAPGLVVTVKMKLAEDGSIQGTPEVTSGGGADGVARA 253
Query: 235 LRENARKAVIKSQAFRLSPSTYKSWRNITLFFVPSKM 271
E+AR+AV++ + L Y SW + + F PS+M
Sbjct: 254 AAESARRAVMRCAPYNLPVDKYDSWSEVIVNFDPSEM 290
>gi|254719701|ref|ZP_05181512.1| hypothetical protein Bru83_09188 [Brucella sp. 83/13]
gi|265984715|ref|ZP_06097450.1| TolA protein [Brucella sp. 83/13]
gi|264663307|gb|EEZ33568.1| TolA protein [Brucella sp. 83/13]
Length = 356
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 47/97 (48%)
Query: 175 SQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRM 234
SQ + +R + WN+P+ L V + +L + G + G V GG + V R
Sbjct: 259 SQSEMDALRGAISKCWNVPAGVADAPGLVVTVKMKLAEDGSIQGTPEVTSGGGADGVARA 318
Query: 235 LRENARKAVIKSQAFRLSPSTYKSWRNITLFFVPSKM 271
E+AR+AV++ + L Y SW + + F PS+M
Sbjct: 319 AAESARRAVMRCAPYNLPVDKYDSWSEVIVNFDPSEM 355
>gi|306837840|ref|ZP_07470702.1| tolA protein [Brucella sp. NF 2653]
gi|306407079|gb|EFM63296.1| tolA protein [Brucella sp. NF 2653]
Length = 298
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 47/97 (48%)
Query: 175 SQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRM 234
SQ + +R + WN+P+ L V + +L + G + G V GG + V R
Sbjct: 201 SQSEMDALRGAISKCWNVPAGVADAPGLVVTVKMKLAEDGSIQGTPEVTSGGGADGVARA 260
Query: 235 LRENARKAVIKSQAFRLSPSTYKSWRNITLFFVPSKM 271
E+AR+AV++ + L Y SW + + F PS+M
Sbjct: 261 AAESARRAVMRCAPYNLPVDKYDSWSEVIVNFDPSEM 297
>gi|306844690|ref|ZP_07477275.1| tolA protein [Brucella sp. BO1]
gi|306274862|gb|EFM56632.1| tolA protein [Brucella sp. BO1]
Length = 298
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 47/97 (48%)
Query: 175 SQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRM 234
SQ + +R + WN+P+ L V + +L + G + G V GG + V R
Sbjct: 201 SQSEMDALRGAISKCWNVPAGVADAPGLVVTVKMKLAEDGSIQGTPEVTSGGGADGVARA 260
Query: 235 LRENARKAVIKSQAFRLSPSTYKSWRNITLFFVPSKM 271
E+AR+AV++ + L Y SW + + F PS+M
Sbjct: 261 AAESARRAVMRCAPYNLPVDKYDSWSEVIVNFDPSEM 297
>gi|189024788|ref|YP_001935556.1| Proline-rich extensin [Brucella abortus S19]
gi|189020360|gb|ACD73082.1| Proline-rich extensin [Brucella abortus S19]
Length = 298
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 47/97 (48%)
Query: 175 SQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRM 234
SQ + +R + WN+P+ L V + +L + G + G V GG + V R
Sbjct: 201 SQSEMDALRGAISKCWNVPAGVADAPGLVVTVKMKLAEDGSIQGTPEVTSGGGADGVARA 260
Query: 235 LRENARKAVIKSQAFRLSPSTYKSWRNITLFFVPSKM 271
E+AR+AV++ + L Y SW + + F PS+M
Sbjct: 261 AAESARRAVMRCAPYNLPVDKYDSWSEVIVNFDPSEM 297
>gi|17986621|ref|NP_539255.1| hypothetical protein BMEI0338 [Brucella melitensis bv. 1 str. 16M]
gi|17982235|gb|AAL51519.1| hypothetical protein BMEI0338 [Brucella melitensis bv. 1 str. 16M]
Length = 180
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 47/97 (48%)
Query: 175 SQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRM 234
SQ + +R + WN+P+ L V + +L + G + G V GG + V R
Sbjct: 83 SQSEMDALRGAISKCWNVPAGVADAPGLVVTVKMKLAEDGSIQGTPEVTSGGGADGVARA 142
Query: 235 LRENARKAVIKSQAFRLSPSTYKSWRNITLFFVPSKM 271
E+AR+AV++ + L Y SW + + F PS+M
Sbjct: 143 AAESARRAVMRCAPYNLPVDKYDSWSEVIVNFDPSEM 179
>gi|90418975|ref|ZP_01226886.1| putative TolA [Aurantimonas manganoxydans SI85-9A1]
gi|90337055|gb|EAS50760.1| putative TolA [Aurantimonas manganoxydans SI85-9A1]
Length = 357
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 47/97 (48%)
Query: 175 SQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRM 234
SQ + +R ++ W+ PS LR+ + +L+ G + + + GG ++ R+
Sbjct: 260 SQSELDALRGQIQRCWSPPSGVSEAGSLRISIQMRLDPSGELEARPQIIGGGGGSMIERV 319
Query: 235 LRENARKAVIKSQAFRLSPSTYKSWRNITLFFVPSKM 271
E A +AV + + L Y +W ++ + F PS+M
Sbjct: 320 AGEAALRAVQRCAPYNLPAEKYDTWADVVVNFDPSQM 356
>gi|86359054|ref|YP_470946.1| putative signal peptide protein [Rhizobium etli CFN 42]
gi|86283156|gb|ABC92219.1| putative signal peptide protein [Rhizobium etli CFN 42]
Length = 145
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 61/110 (55%), Gaps = 1/110 (0%)
Query: 163 SKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINV 222
S+ + + + ++ AI +RN + + +P D K + + H +L++ G V+G
Sbjct: 34 SREDSDQKAPVLTEAAINAMRNAIQDRFFLPGDLKDAGSVHLMFHVRLDKDGRVIGSPEA 93
Query: 223 DVVGGTELVRRMLRENARKAVIKSQAFRLSP-STYKSWRNITLFFVPSKM 271
+V GG+E R+++ + AR+A+I++ + + P Y +W+ + L F S++
Sbjct: 94 EVSGGSERTRKIITDAARRAIIRAAPYTMFPKDKYDAWKEVILNFDASQL 143
>gi|126463083|ref|YP_001044197.1| hypothetical protein Rsph17029_2323 [Rhodobacter sphaeroides ATCC
17029]
gi|126104747|gb|ABN77425.1| hypothetical protein Rsph17029_2323 [Rhodobacter sphaeroides ATCC
17029]
Length = 414
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 4/86 (4%)
Query: 190 WNIPSDFKRFKKLRVKMHFQLNQKGFV-LGKIN-VDVVGGTELVRRMLRENARKAVIKSQ 247
WN+ + V + L+Q G G I ++ GGT+ R E AR+A+I+
Sbjct: 326 WNVGALSSDALSTTVTVAMSLSQDGKPDAGSIRMIESSGGTDAGARQAFEAARRAIIRCG 385
Query: 248 A--FRLSPSTYKSWRNITLFFVPSKM 271
A F L P Y WR + + F PS M
Sbjct: 386 ARGFPLPPEKYDQWREVEMVFDPSGM 411
>gi|221640125|ref|YP_002526387.1| TolA protein [Rhodobacter sphaeroides KD131]
gi|221160906|gb|ACM01886.1| TolA protein [Rhodobacter sphaeroides KD131]
Length = 414
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 4/86 (4%)
Query: 190 WNIPSDFKRFKKLRVKMHFQLNQKGFV-LGKIN-VDVVGGTELVRRMLRENARKAVIKSQ 247
WN+ + V + L+Q G G I ++ GGT+ R E AR+A+I+
Sbjct: 326 WNVGALSSDALSTTVTVAMSLSQDGKPDAGSIRMIESSGGTDAGARQAFEAARRAIIRCG 385
Query: 248 A--FRLSPSTYKSWRNITLFFVPSKM 271
A F L P Y WR + + F PS M
Sbjct: 386 ARGFPLPPEKYDQWREVEMVFDPSGM 411
>gi|254708435|ref|ZP_05170263.1| hypothetical protein BpinM_16150 [Brucella pinnipedialis
M163/99/10]
gi|261315935|ref|ZP_05955132.1| TolA protein [Brucella pinnipedialis M163/99/10]
gi|261304961|gb|EEY08458.1| TolA protein [Brucella pinnipedialis M163/99/10]
Length = 110
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 47/97 (48%)
Query: 175 SQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRM 234
SQ + +R + WN+P+ L V + +L + G + G V GG + V R
Sbjct: 13 SQSEMDALRGAISKCWNVPAGVADAPGLVVTVKMKLAEDGSIQGTPEVTSGGGADGVARA 72
Query: 235 LRENARKAVIKSQAFRLSPSTYKSWRNITLFFVPSKM 271
E+AR+AV++ + L Y SW + + F PS+M
Sbjct: 73 AAESARRAVMRCAPYNLPVDKYDSWSEVIVNFDPSEM 109
>gi|222086975|ref|YP_002545509.1| signal peptide protein [Agrobacterium radiobacter K84]
gi|221724423|gb|ACM27579.1| signal peptide protein [Agrobacterium radiobacter K84]
Length = 410
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/88 (22%), Positives = 47/88 (53%), Gaps = 3/88 (3%)
Query: 182 VRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARK 241
+R+ + WN+ + +R+K+HF+L++ G ++G+ GG + ++ A +
Sbjct: 316 LRDLIAKYWNLMPGLEGAGDVRIKVHFRLDKSGQIVGEPEATTSGGPASTQSAMQSAAVR 375
Query: 242 AVIKSQA--FRLSP-STYKSWRNITLFF 266
AV+++Q+ ++ P Y W+ + + F
Sbjct: 376 AVMRAQSDYLKVLPVDKYDDWQEVVVNF 403
>gi|154252568|ref|YP_001413392.1| hypothetical protein Plav_2121 [Parvibaculum lavamentivorans DS-1]
gi|154156518|gb|ABS63735.1| hypothetical protein Plav_2121 [Parvibaculum lavamentivorans DS-1]
Length = 277
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 42/87 (48%), Gaps = 7/87 (8%)
Query: 190 WNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVD-----VVGGTELVRRMLRENARKAVI 244
W++P+ ++L VK+ LNQ G + + V GG+ R ++A +A+
Sbjct: 190 WSVPAGAPDAEQLIVKIKVYLNQDGSLAAPPELRDKTKLVTGGS--YYRAAADSAMRAIR 247
Query: 245 KSQAFRLSPSTYKSWRNITLFFVPSKM 271
Q F++ Y SWR I L F P +M
Sbjct: 248 LCQPFKMPAEKYTSWREIDLNFDPREM 274
>gi|332559130|ref|ZP_08413452.1| TolA protein [Rhodobacter sphaeroides WS8N]
gi|332276842|gb|EGJ22157.1| TolA protein [Rhodobacter sphaeroides WS8N]
Length = 414
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 39/86 (45%), Gaps = 4/86 (4%)
Query: 190 WNIPSDFKRFKKLRVKMHFQLNQKGFV-LGKIN-VDVVGGTELVRRMLRENARKAVIKSQ 247
WN+ + V + + Q G G I ++ GGT+ R E AR+A+I+
Sbjct: 326 WNVGALSSDAMSTTVTVAMSMRQDGTPEAGSIRMIEASGGTDAGARQAFEAARRAIIRCG 385
Query: 248 A--FRLSPSTYKSWRNITLFFVPSKM 271
A F L P Y WR + + F P+ M
Sbjct: 386 ARGFPLPPEKYDQWREVEMVFDPNGM 411
>gi|256061735|ref|ZP_05451872.1| hypothetical protein Bneo5_15446 [Brucella neotomae 5K33]
gi|261325739|ref|ZP_05964936.1| TolA protein [Brucella neotomae 5K33]
gi|261301719|gb|EEY05216.1| TolA protein [Brucella neotomae 5K33]
Length = 356
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 46/97 (47%)
Query: 175 SQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRM 234
SQ + +R + WN+P+ L V + +L + G + G V GG + V R
Sbjct: 259 SQSEMDALRGAISKCWNVPAGVADAPGLVVTVKMKLAEDGSIQGTPEVTSGGGADGVARA 318
Query: 235 LRENARKAVIKSQAFRLSPSTYKSWRNITLFFVPSKM 271
E+AR+AV++ + L Y SW + + F S+M
Sbjct: 319 AAESARRAVMRCAPYNLPVDKYDSWSEVIVNFDSSEM 355
>gi|209550778|ref|YP_002282695.1| outer membrane protein [Rhizobium leguminosarum bv. trifolii
WSM2304]
gi|209536534|gb|ACI56469.1| outer membrane protein [Rhizobium leguminosarum bv. trifolii
WSM2304]
Length = 381
Score = 43.1 bits (100), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 50/102 (49%), Gaps = 5/102 (4%)
Query: 175 SQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVD--VVGGTELVR 232
SQ ++ + NW + + + +K+HF+L++ G ++G+ ++ T+ R
Sbjct: 278 SQSEEDALKGLIEGNWLVTPGMEGVSGMVIKVHFKLDKDGNIIGQPEIESSGGSSTDSTR 337
Query: 233 RMLRENARKAVIKS-QAFR--LSPSTYKSWRNITLFFVPSKM 271
R L A +AV+KS +FR L Y W + L F PS M
Sbjct: 338 RALESGAYRAVMKSASSFRTTLPMDKYDVWNEVVLNFNPSDM 379
>gi|218516342|ref|ZP_03513182.1| outer membrane protein [Rhizobium etli 8C-3]
Length = 358
Score = 43.1 bits (100), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 50/102 (49%), Gaps = 5/102 (4%)
Query: 175 SQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVD--VVGGTELVR 232
SQ ++ + NW I + + + +HF+L++ G ++G+ ++ T+ R
Sbjct: 255 SQSEEDALKGLIEGNWLITPGMEGLSGMVITVHFKLDKDGNIIGQPEIESSGGSSTDSTR 314
Query: 233 RMLRENARKAVIKS-QAFR--LSPSTYKSWRNITLFFVPSKM 271
R L A +AV+KS +FR L Y +W + L F PS M
Sbjct: 315 RALEGGAYRAVMKSAPSFRTNLPMDKYDAWNEVVLNFHPSDM 356
>gi|327193468|gb|EGE60364.1| outer membrane protein [Rhizobium etli CNPAF512]
Length = 345
Score = 42.7 bits (99), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 50/102 (49%), Gaps = 5/102 (4%)
Query: 175 SQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVD--VVGGTELVR 232
SQ ++ + NW I + + + +HF+L++ G ++G+ ++ T+ R
Sbjct: 242 SQSEEDALKGLIEGNWLITPGMEGLSGMVITVHFKLDKDGNIIGQPEIESSGGSSTDSTR 301
Query: 233 RMLRENARKAVIKS-QAFR--LSPSTYKSWRNITLFFVPSKM 271
R L A +AV+KS +FR L Y +W + L F PS M
Sbjct: 302 RALEGGAYRAVMKSAPSFRTNLPMDKYDAWNEVVLNFHPSDM 343
>gi|299134177|ref|ZP_07027370.1| protein TolA [Afipia sp. 1NLS2]
gi|298590924|gb|EFI51126.1| protein TolA [Afipia sp. 1NLS2]
Length = 313
Score = 42.7 bits (99), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 44/89 (49%), Gaps = 5/89 (5%)
Query: 180 AIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENA 239
A+ + +V W P ++++ +L Q G L + V + G R+ +E+A
Sbjct: 223 AMFKQQVERCWKKPYGGIEAQQIQASFDVRLKQDG-TLEAMPVPLPGSNTPYFRVYQESA 281
Query: 240 RKAVIKSQAFRLSPSTYKSWRNITLFFVP 268
R+A+I+ Q ++L PS + W+ FF P
Sbjct: 282 RRAIIECQPYKLPPSFFNEWK----FFEP 306
>gi|108755185|emb|CAK32577.1| periplasmic protein TonB [uncultured organism]
Length = 296
Score = 42.4 bits (98), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 55/115 (47%), Gaps = 5/115 (4%)
Query: 161 LLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVL-GK 219
L S+V + R + I +VR ++ WN+ + K + L +++ +N G V +
Sbjct: 182 LQSQVRRHDADRPITISEIDLVRRQIARCWNLQAGAKEAENLIIEISVAMNPDGTVRHAR 241
Query: 220 I-NVDVVGGTELVRRMLRENARKAVI--KSQAFRLSPSTYKSWRNITLFFVPSKM 271
I N D V G R E+A +AV+ + Q F+L Y W+ + L F P +M
Sbjct: 242 IQNTDRVAGDPFY-RAAAESALRAVLNPRCQPFKLPRDRYDRWQTMALIFDPKEM 295
>gi|254510110|ref|ZP_05122177.1| possible TolA protein [Rhodobacteraceae bacterium KLH11]
gi|221533821|gb|EEE36809.1| possible TolA protein [Rhodobacteraceae bacterium KLH11]
Length = 365
Score = 42.0 bits (97), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 47/100 (47%), Gaps = 7/100 (7%)
Query: 176 QDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKI--NVDVVGGTELVRR 233
+DA+ + +R WN+ S + V + F L G V+G +D GGT +
Sbjct: 266 KDAMRVAVSRC---WNVGSLSTDALQTVVVVGFSLTPDGKVVGGSLRMLDSSGGTSASAK 322
Query: 234 MLRENARKAVIKSQA--FRLSPSTYKSWRNITLFFVPSKM 271
E AR+AV++ A + L Y W++I + F P +M
Sbjct: 323 QAYEAARRAVLRCGAKGYDLPADKYSQWQDIEITFNPERM 362
>gi|218460855|ref|ZP_03500946.1| outer membrane protein [Rhizobium etli Kim 5]
Length = 352
Score = 42.0 bits (97), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 5/102 (4%)
Query: 175 SQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVD--VVGGTELVR 232
SQ ++ + NW I + + + +HF+L++ G ++G+ ++ T+ R
Sbjct: 249 SQSEEDALKGLIEGNWLITPGMEGLSGMVITVHFKLDKDGNIIGQPEIESSGGSSTDSTR 308
Query: 233 RMLRENARKAVIKS-QAFR--LSPSTYKSWRNITLFFVPSKM 271
R L A +AV+KS +FR L Y W + L F PS M
Sbjct: 309 RALESGAYRAVMKSAPSFRTNLPMDKYDVWNEVVLNFHPSDM 350
>gi|328542543|ref|YP_004302652.1| TolA protein [polymorphum gilvum SL003B-26A1]
gi|326412289|gb|ADZ69352.1| TolA protein [Polymorphum gilvum SL003B-26A1]
Length = 325
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 47/97 (48%), Gaps = 1/97 (1%)
Query: 175 SQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRM 234
SQ + +R ++ WN P L V++ FQL G V G V + + R
Sbjct: 227 SQSELDALRGQISRCWNPPVGAAGADDLLVRLQFQLTVDGAVDGSPRV-LNSSSNPSFRA 285
Query: 235 LRENARKAVIKSQAFRLSPSTYKSWRNITLFFVPSKM 271
++A +AV++ + L + Y++W+++ + F P ++
Sbjct: 286 ASDSAVRAVMRCAPYSLPGNKYETWKDVIINFDPREL 322
>gi|300023931|ref|YP_003756542.1| protein TolA [Hyphomicrobium denitrificans ATCC 51888]
gi|299525752|gb|ADJ24221.1| protein TolA [Hyphomicrobium denitrificans ATCC 51888]
Length = 384
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 43/92 (46%), Gaps = 1/92 (1%)
Query: 180 AIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENA 239
++++++ W P + V++H+++N G + G+ V T ++ E A
Sbjct: 293 GMIKSQLNGCWRPPGTGGGEEVPVVELHWEMNPDGSLSGEPRVTSAPPT-TAGQVYTEAA 351
Query: 240 RKAVIKSQAFRLSPSTYKSWRNITLFFVPSKM 271
+AV FRL P Y +W+ + F P +M
Sbjct: 352 LRAVRMCAPFRLPPDKYNAWKIVDWTFDPRQM 383
>gi|85374729|ref|YP_458791.1| TonB protein [Erythrobacter litoralis HTCC2594]
gi|84787812|gb|ABC63994.1| TonB protein [Erythrobacter litoralis HTCC2594]
Length = 279
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 44/90 (48%), Gaps = 6/90 (6%)
Query: 180 AIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLREN- 238
AI R + +W PS + +++ + F LN+ G + G+ +V G + R E
Sbjct: 184 AIARE-IKPHWQPPSGPE-VEEIVTVLRFSLNEDGSLAGRPSVVRQTGVNEINRAQAERH 241
Query: 239 ---ARKAVIKSQAFRLSPSTYKSWRNITLF 265
A +AV ++ F L P Y +WRNI+ F
Sbjct: 242 GELAIRAVQRAAPFDLPPEYYNAWRNISAF 271
>gi|126737226|ref|ZP_01752961.1| tonB domain protein, putative [Roseobacter sp. SK209-2-6]
gi|126721811|gb|EBA18514.1| tonB domain protein, putative [Roseobacter sp. SK209-2-6]
Length = 381
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 4/86 (4%)
Query: 190 WNIPSDFKRFKKLRVKMHFQLNQKGFV-LGKIN-VDVVGGTELVRRMLRENARKAVIKSQ 247
WN+ S + V++ L+Q G G I + GG+ + E AR+A+I+
Sbjct: 293 WNVGSLSSDALRTTVEVSVTLSQDGKPDPGSIRMISSTGGSNSAAKQAYEAARRAIIRCG 352
Query: 248 A--FRLSPSTYKSWRNITLFFVPSKM 271
A F+L Y WR + + F P KM
Sbjct: 353 ARGFQLPAEKYSQWREVVMTFNPEKM 378
>gi|114570967|ref|YP_757647.1| putative TolA [Maricaulis maris MCS10]
gi|114341429|gb|ABI66709.1| Cell division and transport-associated protein TolA [Maricaulis
maris MCS10]
Length = 271
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 42/94 (44%), Gaps = 4/94 (4%)
Query: 180 AIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVD----VVGGTELVRRML 235
A++R+ + W D +L V++ L++ G + G + ++ R+
Sbjct: 174 AMIRSHLSRCWRASLDAPEPNELAVQLVLNLDRSGELTGPPRLTDQARILNSPNPYLRVA 233
Query: 236 RENARKAVIKSQAFRLSPSTYKSWRNITLFFVPS 269
E A +A ++ Q + L P Y WR I + F PS
Sbjct: 234 GERALRAAVQCQPYPLPPEAYSEWRQIEVNFSPS 267
>gi|307944544|ref|ZP_07659884.1| TolA, TolA protein [Roseibium sp. TrichSKD4]
gi|307772293|gb|EFO31514.1| TolA, TolA protein [Roseibium sp. TrichSKD4]
Length = 301
Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 47/97 (48%), Gaps = 1/97 (1%)
Query: 175 SQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRM 234
+Q + +R +V A WN P + LRV++ F L+Q G V G V + + R
Sbjct: 203 TQSELDALRGQVSACWNPPVGAAGAEDLRVRVRFNLDQSGGVSGSPEV-INNSSNPAFRA 261
Query: 235 LRENARKAVIKSQAFRLSPSTYKSWRNITLFFVPSKM 271
+A +A+++ + L + Y +W + L F P ++
Sbjct: 262 AASSAVRAIMRCAPYSLPIAKYDAWEEVILNFDPKEL 298
>gi|159043659|ref|YP_001532453.1| hypothetical protein Dshi_1110 [Dinoroseobacter shibae DFL 12]
gi|157911419|gb|ABV92852.1| conserved hypothetical protein [Dinoroseobacter shibae DFL 12]
Length = 351
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 41/86 (47%), Gaps = 4/86 (4%)
Query: 190 WNIPSDFKRFKKLRVKMHFQLNQKG-FVLGKIN-VDVVGGTELVRRMLRENARKAVIK-- 245
WN+ S + V + ++ Q G V+ I + GG++ R E AR+A+I+
Sbjct: 263 WNVGSLSSDALRTTVTVAVEMEQSGRPVINSIRMIGSEGGSDAAARQAFETARRAIIRCG 322
Query: 246 SQAFRLSPSTYKSWRNITLFFVPSKM 271
S F L Y WR+I + F P +M
Sbjct: 323 SAGFDLPVEKYAQWRDIEMTFNPERM 348
>gi|146276613|ref|YP_001166772.1| hypothetical protein Rsph17025_0561 [Rhodobacter sphaeroides ATCC
17025]
gi|145554854|gb|ABP69467.1| hypothetical protein Rsph17025_0561 [Rhodobacter sphaeroides ATCC
17025]
Length = 416
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 39/86 (45%), Gaps = 4/86 (4%)
Query: 190 WNIPSDFKRFKKLRVKMHFQLNQKGFV-LGKIN-VDVVGGTELVRRMLRENARKAVIKSQ 247
WN+ + V + + Q G G I ++ GGT+ R E AR+A+I+
Sbjct: 328 WNVGALSTEALATTVTVAMTMAQDGKPDAGSIRMIESRGGTDAGARQAFEAARRAIIRCG 387
Query: 248 A--FRLSPSTYKSWRNITLFFVPSKM 271
A F L P Y WR + + F P+ M
Sbjct: 388 ARGFPLPPEKYDQWREVEMEFDPNGM 413
>gi|86139147|ref|ZP_01057717.1| tonB domain protein, putative [Roseobacter sp. MED193]
gi|85823991|gb|EAQ44196.1| tonB domain protein, putative [Roseobacter sp. MED193]
Length = 375
Score = 39.3 bits (90), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 41/94 (43%), Gaps = 4/94 (4%)
Query: 182 VRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVL-GKIN-VDVVGGTELVRRMLRENA 239
+R V WN+ S K V++ L G G I V GG+ + E A
Sbjct: 279 LRVSVSKCWNVGSLSTEALKTTVEVSVSLEADGRPKNGSIRMVSSTGGSAGAAKQAYEAA 338
Query: 240 RKAVIKSQA--FRLSPSTYKSWRNITLFFVPSKM 271
R+A+I+ A F L Y WR+I + F P KM
Sbjct: 339 RRAIIRCGAKGFSLPSEKYDHWRDIVMTFNPEKM 372
>gi|307294754|ref|ZP_07574596.1| putative TolA [Sphingobium chlorophenolicum L-1]
gi|306879228|gb|EFN10446.1| putative TolA [Sphingobium chlorophenolicum L-1]
Length = 303
Score = 38.5 bits (88), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 47/91 (51%), Gaps = 5/91 (5%)
Query: 180 AIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINV-DVVGGTELVRRML--- 235
A +R +V +W PS ++LR + QL++ G ++G+ V + G T R +
Sbjct: 208 AEIRRQVKPHWKSPSGAD-IEQLRTFVDVQLSRDGSIVGQPQVFNTTGITASNRSQVTLH 266
Query: 236 RENARKAVIKSQAFRLSPSTYKSWRNITLFF 266
+E A KA+ + F+L P Y W+++ + F
Sbjct: 267 QELAVKAIRLAAPFKLPPDLYDGWKSLRISF 297
>gi|157825553|ref|YP_001493273.1| periplasmic protein TonB [Rickettsia akari str. Hartford]
gi|157799511|gb|ABV74765.1| Periplasmic protein TonB [Rickettsia akari str. Hartford]
Length = 326
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 52/101 (51%), Gaps = 4/101 (3%)
Query: 175 SQDAIAIVRNRVIANW-NIPSDFKRFKKLRVKMHFQLNQKGFV-LGKINVDVVGG-TELV 231
S+ ++++ ++ +W N+P+ + K++V + L++ G V K+ + T V
Sbjct: 226 SESETSLIKRQIERHWSNVPAGVRGNNKVKVIISITLDKAGNVEHAKVKEKICPNITASV 285
Query: 232 RRMLRENARKAVIKSQAFR-LSPSTYKSWRNITLFFVPSKM 271
L +NA +AV ++ L P+ + W+ I + F PSK+
Sbjct: 286 CEALADNAIRAVWQASPIENLDPARFNHWKEINVSFDPSKL 326
>gi|157803960|ref|YP_001492509.1| hypothetical protein A1E_03985 [Rickettsia canadensis str. McKiel]
gi|157785223|gb|ABV73724.1| hypothetical protein A1E_03985 [Rickettsia canadensis str. McKiel]
Length = 316
Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 48/96 (50%), Gaps = 4/96 (4%)
Query: 180 AIVRNRVIANW-NIPSDFKRFKKLRVKMHFQLNQKGFVLG-KINVDVVGG-TELVRRMLR 236
A+++ ++ +W NIP+ + K++V + L++ G V K+ + T V L
Sbjct: 221 ALIKRQIERHWSNIPAGVRGNNKVKVIISITLDKAGNVEQVKVQEKICPNITASVCEALA 280
Query: 237 ENARKAVIKSQAFR-LSPSTYKSWRNITLFFVPSKM 271
+NA +AV ++ L P + W+ I F PSK+
Sbjct: 281 DNAIRAVWQASPIENLDPGRFNHWKEINFSFDPSKL 316
>gi|189499506|ref|YP_001958976.1| phosphoribosylamine--glycine ligase [Chlorobium phaeobacteroides
BS1]
gi|189494947|gb|ACE03495.1| phosphoribosylamine/glycine ligase [Chlorobium phaeobacteroides
BS1]
Length = 426
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 43/78 (55%), Gaps = 10/78 (12%)
Query: 127 KISKATNKEQDLQGI-SFAEKKSIDTVVVRPDKKELLSKVE--KSSRKRI--PSQDAIAI 181
K+ A K D+QG+ +FAEKK +D VV P++ V+ +SS K I P +DA +
Sbjct: 43 KVENAAIKATDIQGLFAFAEKKGVDLTVVGPEQSLESGAVDLFRSSGKMIVGPLKDAAQL 102
Query: 182 VRNRVIAN-----WNIPS 194
++V A ++IP+
Sbjct: 103 ETSKVFAKDFMKRYDIPT 120
>gi|255728339|ref|XP_002549095.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240133411|gb|EER32967.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 756
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 62/140 (44%), Gaps = 10/140 (7%)
Query: 70 ENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKIS 129
E +VR G + T T A E S + Q +++L +P Y K
Sbjct: 427 EEVVRFLEKNTEGVSLQESTSTSANERVIDPYSDAYARQHNVDASLKVIPAKDYISFKDY 486
Query: 130 KATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRN---RV 186
K KEQ + G++ + D V + P++ LS VE +S + S+ A+ I+ N R+
Sbjct: 487 K---KEQLVNGLNKLNQSQEDNVKLSPEE---LSIVE-ASLGSLTSKQALEIITNYSSRI 539
Query: 187 IANWNIPSDFKRFKKLRVKM 206
I NWN S F LR+ +
Sbjct: 540 IKNWNNSSKLIGFDLLRISI 559
>gi|150392255|ref|YP_001322304.1| adenine deaminase [Alkaliphilus metalliredigens QYMF]
gi|149952117|gb|ABR50645.1| adenine deaminase [Alkaliphilus metalliredigens QYMF]
Length = 604
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 70/156 (44%), Gaps = 17/156 (10%)
Query: 44 IYNEDY-HSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSS 102
IY E+ HS K KKI+E + S +E LVR + DQ + + E T ++
Sbjct: 388 IYPEEVKHSVKCKKIQESAIAIPASGKEALVRCIEL------IPDQNLSGSLE-VTVKTQ 440
Query: 103 SSKGEQALKESALLRMPVSPYDKQ-KISKATNKEQDLQGISFAEKKSIDT---VVVRPDK 158
+ + AL + V Y + I KA K L+ +FAE + DT + V +
Sbjct: 441 QGNAISDVAQDALQMVCVERYGRNGGIGKAFVKGFGLKHGAFAESVAHDTHNIMAVGTNS 500
Query: 159 KELLSKVEKSSRKRIPSQDAIAIVRN-RVIANWNIP 193
K++ + + I + IA+V+N RVI +P
Sbjct: 501 KDITMAI----NRVIEMEGGIAVVKNGRVIEEMRLP 532
>gi|315044579|ref|XP_003171665.1| WD repeat-containing protein 48 [Arthroderma gypseum CBS 118893]
gi|311344008|gb|EFR03211.1| WD repeat-containing protein 48 [Arthroderma gypseum CBS 118893]
Length = 1023
Score = 36.2 bits (82), Expect = 4.8, Method: Composition-based stats.
Identities = 34/136 (25%), Positives = 60/136 (44%), Gaps = 6/136 (4%)
Query: 60 PVVQFKGSSQENLVRDFSVQEN----GDRFSDQTKTHATENETKRSSSSKGEQALKESAL 115
P + SS L D SV ++ D F++ TK +T+ + S S EQ S
Sbjct: 638 PFPELHNSSNGPLANDNSVGKDVPGSSDYFANTTKRPSTDADPAMKSRSSDEQT-PLSVP 696
Query: 116 LRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPS 175
+ P P +++ K T ++F +K + T +P +E + +KSS K P
Sbjct: 697 IATPSEPEKEERPKKGTTLFGKKFQMTFPKKSKVATET-KPIAEEKTEESDKSSEKERPF 755
Query: 176 QDAIAIVRNRVIANWN 191
D V +++ A+++
Sbjct: 756 DDNFRGVIDKIHADYD 771
Searching..................................................done
Results from round 2
>gi|254780549|ref|YP_003064962.1| signal peptide protein [Candidatus Liberibacter asiaticus str.
psy62]
gi|254040226|gb|ACT57022.1| signal peptide protein [Candidatus Liberibacter asiaticus str.
psy62]
Length = 271
Score = 401 bits (1031), Expect = e-110, Method: Composition-based stats.
Identities = 271/271 (100%), Positives = 271/271 (100%)
Query: 1 MRLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP 60
MRLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP
Sbjct: 1 MRLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP 60
Query: 61 VVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPV 120
VVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPV
Sbjct: 61 VVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPV 120
Query: 121 SPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIA 180
SPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIA
Sbjct: 121 SPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIA 180
Query: 181 IVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENAR 240
IVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENAR
Sbjct: 181 IVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENAR 240
Query: 241 KAVIKSQAFRLSPSTYKSWRNITLFFVPSKM 271
KAVIKSQAFRLSPSTYKSWRNITLFFVPSKM
Sbjct: 241 KAVIKSQAFRLSPSTYKSWRNITLFFVPSKM 271
>gi|315122877|ref|YP_004063366.1| signal peptide protein [Candidatus Liberibacter solanacearum
CLso-ZC1]
gi|313496279|gb|ADR52878.1| signal peptide protein [Candidatus Liberibacter solanacearum
CLso-ZC1]
Length = 265
Score = 354 bits (909), Expect = 6e-96, Method: Composition-based stats.
Identities = 129/275 (46%), Positives = 173/275 (62%), Gaps = 14/275 (5%)
Query: 1 MRLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKY----KK 56
MR+ENGLAIS+ILH +FLLLLY NFNVQL VP+S+ E S+ NI+N+D HS+KY
Sbjct: 1 MRVENGLAISLILHFIFLLLLYLNFNVQLFVPVSKIEGSSIKNIHNDDLHSNKYSGDKNN 60
Query: 57 IEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALL 116
+E V + S++ F Q+N + DQ KT +E K+ S S+GE ALKES+
Sbjct: 61 EKEEVFHSREMSEKTGAHWFEDQQNNSKSFDQGKTQTIPDELKKFSDSEGEHALKESSPP 120
Query: 117 RMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQ 176
+ + P DK++ K NK KK+I + V K++ + SQ
Sbjct: 121 NVSLRPLDKKQHIK--NKAHSQHSTPSIIKKNIAKLPV--------PKIDTKQSRSNFSQ 170
Query: 177 DAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLR 236
+ I IVR R++ NWNIP D K+FKK++VKMHF LN+ GFV+G ++ VVGGTEL RR L
Sbjct: 171 NEIGIVRRRIMGNWNIPPDLKKFKKIQVKMHFSLNRNGFVIGNPDITVVGGTELARRTLV 230
Query: 237 ENARKAVIKSQAFRLSPSTYKSWRNITLFFVPSKM 271
++ARKA IKSQ FRL YK+WRN+T+ F+PSKM
Sbjct: 231 KSARKAFIKSQPFRLPADKYKNWRNMTIHFIPSKM 265
>gi|163758791|ref|ZP_02165878.1| hypothetical protein HPDFL43_15247 [Hoeflea phototrophica DFL-43]
gi|162284081|gb|EDQ34365.1| hypothetical protein HPDFL43_15247 [Hoeflea phototrophica DFL-43]
Length = 332
Score = 167 bits (422), Expect = 2e-39, Method: Composition-based stats.
Identities = 29/105 (27%), Positives = 56/105 (53%)
Query: 167 KSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVG 226
+++R SQ + +R ++ WNI +RV + +L+ G ++G+ +V G
Sbjct: 227 RTTRGNTLSQSEMDALRGQIQRYWNIIPGMADGGDVRVTVKMRLDVSGNIVGQPDVSATG 286
Query: 227 GTELVRRMLRENARKAVIKSQAFRLSPSTYKSWRNITLFFVPSKM 271
G+ R L +A++AV+++Q ++L Y SW + + F PS+M
Sbjct: 287 GSAGTRGTLASSAKRAVLRAQPYQLPAEKYDSWSEVVVNFDPSQM 331
>gi|150397826|ref|YP_001328293.1| putative signal peptide protein [Sinorhizobium medicae WSM419]
gi|150029341|gb|ABR61458.1| conserved hypothetical signal peptide protein [Sinorhizobium
medicae WSM419]
Length = 356
Score = 162 bits (410), Expect = 4e-38, Method: Composition-based stats.
Identities = 40/171 (23%), Positives = 74/171 (43%), Gaps = 10/171 (5%)
Query: 111 KESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKV----- 165
K + +P K+ + K+ Q S I ++ + + +K
Sbjct: 185 KVEKPAQTAKTPERKKDEVQKEQKKASSQKESDFNADEIAALLNKQESSGGGAKRSTEEA 244
Query: 166 ----EKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKIN 221
+K++ SQ + +R ++ NW+I +R+K+ +L+ G ++G
Sbjct: 245 ALGGKKTTTGNTLSQSEMDALRGQIQNNWSIIPGMADAADVRIKVRMRLDPNGELIGDPE 304
Query: 222 VDVVGGTELVRRMLRENARKAVIKSQAFRLSP-STYKSWRNITLFFVPSKM 271
V+ GG++ RR L AR+A++KS F+ P Y SW + + F PS M
Sbjct: 305 VEASGGSDSARRALMGGARRAILKSAPFKGLPAEKYDSWSEVVVNFDPSSM 355
>gi|227823309|ref|YP_002827281.1| putative TolA outer membrane protein [Sinorhizobium fredii NGR234]
gi|227342310|gb|ACP26528.1| putative TolA outer membrane protein [Sinorhizobium fredii NGR234]
Length = 356
Score = 162 bits (409), Expect = 6e-38, Method: Composition-based stats.
Identities = 36/107 (33%), Positives = 57/107 (53%), Gaps = 1/107 (0%)
Query: 166 EKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVV 225
+K++ SQ + +R ++ NW+I +R+K+ FQL+ G ++G+ V+
Sbjct: 249 KKTTSGNTLSQSEMDALRGQIQNNWSIIPGMADAADVRIKVTFQLDPNGELIGEPEVEAT 308
Query: 226 GGTELVRRMLRENARKAVIKSQAFRLSP-STYKSWRNITLFFVPSKM 271
GG+E RR L AR+AV+KS F P Y SW + + F PS M
Sbjct: 309 GGSEAARRALASGARRAVLKSAPFTALPKDKYDSWSEVVVNFDPSSM 355
>gi|15966493|ref|NP_386846.1| putative signal peptide protein [Sinorhizobium meliloti 1021]
gi|307300470|ref|ZP_07580250.1| putative signal peptide protein [Sinorhizobium meliloti BL225C]
gi|307318335|ref|ZP_07597770.1| putative signal peptide protein [Sinorhizobium meliloti AK83]
gi|15075764|emb|CAC47319.1| Hypothetical signal peptide protein [Sinorhizobium meliloti 1021]
gi|306896017|gb|EFN26768.1| putative signal peptide protein [Sinorhizobium meliloti AK83]
gi|306904636|gb|EFN35220.1| putative signal peptide protein [Sinorhizobium meliloti BL225C]
Length = 356
Score = 161 bits (408), Expect = 7e-38, Method: Composition-based stats.
Identities = 32/107 (29%), Positives = 57/107 (53%), Gaps = 1/107 (0%)
Query: 166 EKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVV 225
+K++ SQ + +R ++ NW+I +R+K+ +L+ G ++G+ V+
Sbjct: 249 KKTTSGNTLSQSEMDALRGQIQNNWSIIPGMADAADVRIKVTMRLDPNGDLIGEPEVEAS 308
Query: 226 GGTELVRRMLRENARKAVIKSQAFRLSP-STYKSWRNITLFFVPSKM 271
GG++ RR L AR+A++KS F+ P Y SW + + F PS M
Sbjct: 309 GGSDAARRALMGGARRAILKSVPFKGLPADKYDSWSEVVVNFDPSSM 355
>gi|15891233|ref|NP_356905.1| hypothetical protein Atu3715 [Agrobacterium tumefaciens str. C58]
gi|15159596|gb|AAK89690.1| conserved hypothetical protein [Agrobacterium tumefaciens str. C58]
Length = 384
Score = 158 bits (399), Expect = 8e-37, Method: Composition-based stats.
Identities = 29/107 (27%), Positives = 55/107 (51%), Gaps = 1/107 (0%)
Query: 166 EKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVV 225
+KS+ SQ + +R + NW I +RV++ +L++ G ++G+ ++
Sbjct: 277 KKSTGGSTLSQTEMDALRGAIQKNWQIIPGMADAADVRVRVTMKLDRDGTIIGRPEIEAT 336
Query: 226 GGTELVRRMLRENARKAVIKSQAFRLSP-STYKSWRNITLFFVPSKM 271
GG+E RR L A +A+++S F P Y +W + + F PS++
Sbjct: 337 GGSEGTRRALSGGAYRAIMRSAPFTNLPADKYDAWNEVVVNFDPSEL 383
>gi|332716444|ref|YP_004443910.1| putative TolA outer membrane protein [Agrobacterium sp. H13-3]
gi|325063129|gb|ADY66819.1| putative TolA outer membrane protein [Agrobacterium sp. H13-3]
Length = 389
Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats.
Identities = 28/107 (26%), Positives = 55/107 (51%), Gaps = 1/107 (0%)
Query: 166 EKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVV 225
+K++ SQ + +R + NW I +RV++ +L++ G ++G+ ++
Sbjct: 282 KKTTGGSTLSQTEMDALRGAIQKNWQIIPGMADASDVRVRVTMKLDRDGSIIGRPEIEAT 341
Query: 226 GGTELVRRMLRENARKAVIKSQAFRLSP-STYKSWRNITLFFVPSKM 271
GG+E RR L A +A+++S F P Y +W + + F PS++
Sbjct: 342 GGSEGTRRALSGGAYRAIMRSAPFTNLPADKYDAWNEVVVNFDPSEL 388
>gi|222086974|ref|YP_002545508.1| signal peptide protein [Agrobacterium radiobacter K84]
gi|221724422|gb|ACM27578.1| signal peptide protein [Agrobacterium radiobacter K84]
Length = 139
Score = 148 bits (374), Expect = 7e-34, Method: Composition-based stats.
Identities = 32/102 (31%), Positives = 55/102 (53%), Gaps = 1/102 (0%)
Query: 171 KRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTEL 230
K SQ + + +V NWNIP+D K+RV +H +L++ G ++G V GG E
Sbjct: 36 KTGFSQAEMLALHEQVTRNWNIPADLPHANKVRVAVHMKLDRSGQIIGSPEVTATGGPEQ 95
Query: 231 VRRMLRENARKAVIKSQAFRLSP-STYKSWRNITLFFVPSKM 271
R + ++A +AV++S F+ P Y +W+ + + F S +
Sbjct: 96 TRNAVAKSASRAVLRSAPFKNLPLDKYDAWKEVIINFDTSNL 137
>gi|218662998|ref|ZP_03518928.1| putative TolA outer membrane protein [Rhizobium etli IE4771]
Length = 378
Score = 148 bits (373), Expect = 9e-34, Method: Composition-based stats.
Identities = 48/191 (25%), Positives = 84/191 (43%), Gaps = 19/191 (9%)
Query: 83 DRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGIS 142
++ DQ KT E K+ + K E A S++ S ++ +IS NK G +
Sbjct: 203 EKAQDQPKTADKPTE-KKKADQKQETAKSASSMK----SDFNADEISALLNKTDPSAGGA 257
Query: 143 FAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKL 202
+ +E +KS+ S + +++ + NW + + +
Sbjct: 258 ------------KRSTQEASLGAKKSNGGSKLSMSEMDALKSAIAGNWTVIPGMEGMGDV 305
Query: 203 RVKMHFQLNQKGFVLGKINVDVVGGT-ELVRRMLRENARKAVIKSQAFRLSP-STYKSWR 260
R+K+H L+Q G ++G+ V+ VGG E RR L A +A++KS F P Y +W
Sbjct: 306 RIKVHMNLDQDGNIVGEPEVEAVGGDNESTRRALAGGAYRAIMKSAPFSSLPKDKYDAWS 365
Query: 261 NITLFFVPSKM 271
+ + F PS +
Sbjct: 366 EVVVNFDPSDL 376
>gi|222149662|ref|YP_002550619.1| hypothetical protein Avi_3620 [Agrobacterium vitis S4]
gi|221736644|gb|ACM37607.1| conserved hypothetical protein [Agrobacterium vitis S4]
Length = 389
Score = 146 bits (369), Expect = 2e-33, Method: Composition-based stats.
Identities = 27/106 (25%), Positives = 59/106 (55%), Gaps = 1/106 (0%)
Query: 166 EKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVV 225
+K++ SQ + +R + NW++ S + + ++ HF+L++ G ++G+ V
Sbjct: 282 KKTTGGSTLSQSEMDALRGAIQNNWSVLSGMGDAQGMVIRAHFKLDESGNLIGEPEVTAT 341
Query: 226 GGTELVRRMLRENARKAVIKSQAFRLSP-STYKSWRNITLFFVPSK 270
GG+ ++++ +AR+A++KS F+ P Y +W + + F PS+
Sbjct: 342 GGSPSAQQVMISSARRAILKSVPFKNLPVEKYDAWSEVVVNFDPSE 387
>gi|254708435|ref|ZP_05170263.1| hypothetical protein BpinM_16150 [Brucella pinnipedialis
M163/99/10]
gi|261315935|ref|ZP_05955132.1| TolA protein [Brucella pinnipedialis M163/99/10]
gi|261304961|gb|EEY08458.1| TolA protein [Brucella pinnipedialis M163/99/10]
Length = 110
Score = 145 bits (366), Expect = 6e-33, Method: Composition-based stats.
Identities = 30/106 (28%), Positives = 51/106 (48%)
Query: 166 EKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVV 225
+K++ SQ + +R + WN+P+ L V + +L + G + G V
Sbjct: 4 KKNTGGSKLSQSEMDALRGAISKCWNVPAGVADAPGLVVTVKMKLAEDGSIQGTPEVTSG 63
Query: 226 GGTELVRRMLRENARKAVIKSQAFRLSPSTYKSWRNITLFFVPSKM 271
GG + V R E+AR+AV++ + L Y SW + + F PS+M
Sbjct: 64 GGADGVARAAAESARRAVMRCAPYNLPVDKYDSWSEVIVNFDPSEM 109
>gi|239832784|ref|ZP_04681113.1| TolA protein [Ochrobactrum intermedium LMG 3301]
gi|239825051|gb|EEQ96619.1| TolA protein [Ochrobactrum intermedium LMG 3301]
Length = 356
Score = 141 bits (355), Expect = 9e-32, Method: Composition-based stats.
Identities = 31/106 (29%), Positives = 51/106 (48%)
Query: 166 EKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVV 225
+K++ SQ + +R + WN+P+ L V + +LNQ G + G V
Sbjct: 250 KKNTGGSKLSQSEMDALRGAISKCWNVPAGVADAPGLIVTVKMKLNQDGSIQGVPEVTSG 309
Query: 226 GGTELVRRMLRENARKAVIKSQAFRLSPSTYKSWRNITLFFVPSKM 271
GG + V R E+A++AV + + L Y SW + + F PS+M
Sbjct: 310 GGGDGVGRAAAESAKRAVARCAPYNLPVDKYDSWSEVIVNFDPSEM 355
>gi|241206186|ref|YP_002977282.1| outer membrane protein [Rhizobium leguminosarum bv. trifolii
WSM1325]
gi|240860076|gb|ACS57743.1| outer membrane protein [Rhizobium leguminosarum bv. trifolii
WSM1325]
Length = 379
Score = 140 bits (352), Expect = 2e-31, Method: Composition-based stats.
Identities = 42/196 (21%), Positives = 76/196 (38%), Gaps = 16/196 (8%)
Query: 89 TKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKS 148
K E ++ + E K + P DK+K K + +
Sbjct: 185 AKPQVKPPEPQKPAEKPPE---KTPDQPKTADVPTDKKKADKKQETAKSASAMKSDFNAD 241
Query: 149 -IDTVVVRPDKKELLSK---------VEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKR 198
+ ++ + D +K +KS+ SQ VR + NW + +
Sbjct: 242 EVAALLNKTDPSAGGAKRSTQEASLGAKKSNGGSKLSQSEEDAVRGLIEGNWLVTPGMEG 301
Query: 199 FKKLRVKMHFQLNQKGFVLGKINVD--VVGGTELVRRMLRENARKAVIKSQAFRLSP-ST 255
+ +K+H +L++ G ++G+ V+ ++ RR L A +AV+KS F + P
Sbjct: 302 LSGMVIKVHMKLDKDGNIIGQPEVESSGGSSSDATRRALEGGAYRAVMKSAPFSMLPKDK 361
Query: 256 YKSWRNITLFFVPSKM 271
Y++W L F PS M
Sbjct: 362 YEAWNEFDLNFDPSSM 377
>gi|17986621|ref|NP_539255.1| hypothetical protein BMEI0338 [Brucella melitensis bv. 1 str. 16M]
gi|17982235|gb|AAL51519.1| hypothetical protein BMEI0338 [Brucella melitensis bv. 1 str. 16M]
Length = 180
Score = 139 bits (351), Expect = 3e-31, Method: Composition-based stats.
Identities = 44/184 (23%), Positives = 71/184 (38%), Gaps = 21/184 (11%)
Query: 88 QTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKK 147
+T E K++ S+ K A+ + +KQK S K Q S KK
Sbjct: 17 KTNERKQPEEKKKTQSASQTSQSKNDAIADEVAALLNKQKASGGGAKRSTDQA-SLGGKK 75
Query: 148 SIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMH 207
+ + SQ + +R + WN+P+ L V +
Sbjct: 76 N--------------------TGGSKLSQSEMDALRGAISKCWNVPAGVADAPGLVVTVK 115
Query: 208 FQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPSTYKSWRNITLFFV 267
+L + G + G V GG + V R E+AR+AV++ + L Y SW + + F
Sbjct: 116 MKLAEDGSIQGTPEVTSGGGADGVARAAAESARRAVMRCAPYNLPVDKYDSWSEVIVNFD 175
Query: 268 PSKM 271
PS+M
Sbjct: 176 PSEM 179
>gi|153008548|ref|YP_001369763.1| TolA protein [Ochrobactrum anthropi ATCC 49188]
gi|151560436|gb|ABS13934.1| TolA protein [Ochrobactrum anthropi ATCC 49188]
Length = 356
Score = 139 bits (350), Expect = 4e-31, Method: Composition-based stats.
Identities = 35/145 (24%), Positives = 62/145 (42%)
Query: 127 KISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRV 186
+ SK+ N + + K+ + + +K++ SQ + +R +
Sbjct: 211 QTSKSKNDAIADEVAALLNKQKAAGGGAKRSTDQASLGGKKNTGGSKLSQSEMDALRGAI 270
Query: 187 IANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKS 246
WN+P+ L V + +LNQ G + G V GG + V R E+A++AV +
Sbjct: 271 SKCWNVPAGVADAPGLVVTVKMKLNQDGSIQGVPEVTSGGGGDGVGRAAAESAKRAVARC 330
Query: 247 QAFRLSPSTYKSWRNITLFFVPSKM 271
+ L Y SW + + F PS+M
Sbjct: 331 APYNLPVDKYDSWSEVIVNFDPSEM 355
>gi|116253710|ref|YP_769548.1| TolA outer membrane protein [Rhizobium leguminosarum bv. viciae
3841]
gi|115258358|emb|CAK09461.1| putative TolA outer membrane protein [Rhizobium leguminosarum bv.
viciae 3841]
Length = 379
Score = 139 bits (349), Expect = 5e-31, Method: Composition-based stats.
Identities = 43/196 (21%), Positives = 76/196 (38%), Gaps = 16/196 (8%)
Query: 89 TKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKS 148
K E ++ + E K + P DK+K K + +
Sbjct: 185 AKPQVKPPEPQKPAEKPPE---KTPEQPKTADVPTDKKKADKKQETAKSASSMKSDFNAD 241
Query: 149 -IDTVVVRPDKKELLSK---------VEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKR 198
I ++ + D +K +KS+ SQ VR + NW + +
Sbjct: 242 EISILLNKTDPSAGGAKRSTQEASLGAKKSNGGSKLSQSEEDAVRGLIEGNWLVTPGMEG 301
Query: 199 FKKLRVKMHFQLNQKGFVLGKINVD--VVGGTELVRRMLRENARKAVIKSQAFRLSP-ST 255
+ +K+H +L++ G ++G+ V+ ++ RR L A +AV+KS F + P
Sbjct: 302 LSGMVIKVHMKLDKDGNIIGQPEVESSGGSSSDATRRALEGGAYRAVMKSAPFSMLPKDK 361
Query: 256 YKSWRNITLFFVPSKM 271
Y++W L F PS M
Sbjct: 362 YEAWNEFDLNFDPSSM 377
>gi|190893277|ref|YP_001979819.1| outer membrane protein [Rhizobium etli CIAT 652]
gi|190698556|gb|ACE92641.1| outer membrane protein [Rhizobium etli CIAT 652]
Length = 379
Score = 139 bits (349), Expect = 5e-31, Method: Composition-based stats.
Identities = 43/195 (22%), Positives = 76/195 (38%), Gaps = 16/195 (8%)
Query: 90 KTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKS- 148
K E ++ + E+ E + P DK+K K + +
Sbjct: 186 KPQVKPPEPQKPAEKPPEKTPDE---PKAAEKPTDKKKADKKQEVAKSASSMKSDFNADE 242
Query: 149 IDTVVVRPDKKELLSK---------VEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRF 199
I ++ + D +K +KS+ SQ +R+ + NW I +
Sbjct: 243 ISALLNKTDPSAGGAKRSTQEASLGAKKSNGGSKLSQSEEDAMRSLIEGNWLITPGMEGL 302
Query: 200 KKLRVKMHFQLNQKGFVLGKINVD--VVGGTELVRRMLRENARKAVIKSQAFRLSP-STY 256
+ +K+H +L++ G ++G+ V+ ++ RR L A +AV+KS F P Y
Sbjct: 303 SGMVIKVHMKLDRDGNIIGQPEVESSGGSSSDSTRRALESGAYRAVMKSAPFTTLPKDKY 362
Query: 257 KSWRNITLFFVPSKM 271
+W L F PS M
Sbjct: 363 DAWNEFDLNFDPSSM 377
>gi|306841417|ref|ZP_07474119.1| tolA protein [Brucella sp. BO2]
gi|306288523|gb|EFM59875.1| tolA protein [Brucella sp. BO2]
Length = 291
Score = 133 bits (335), Expect = 2e-29, Method: Composition-based stats.
Identities = 30/106 (28%), Positives = 51/106 (48%)
Query: 166 EKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVV 225
+K++ SQ + +R + WN+P+ L V + +L + G + G V
Sbjct: 185 KKNTGGSKLSQSEMDALRGAISKCWNVPAGVADAPGLVVTVKMKLAEDGSIQGTPEVTSG 244
Query: 226 GGTELVRRMLRENARKAVIKSQAFRLSPSTYKSWRNITLFFVPSKM 271
GG + V R E+AR+AV++ + L Y SW + + F PS+M
Sbjct: 245 GGADGVARAAAESARRAVMRCAPYNLPVDKYDSWSEVIVNFDPSEM 290
>gi|189024788|ref|YP_001935556.1| Proline-rich extensin [Brucella abortus S19]
gi|189020360|gb|ACD73082.1| Proline-rich extensin [Brucella abortus S19]
Length = 298
Score = 132 bits (333), Expect = 3e-29, Method: Composition-based stats.
Identities = 30/106 (28%), Positives = 51/106 (48%)
Query: 166 EKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVV 225
+K++ SQ + +R + WN+P+ L V + +L + G + G V
Sbjct: 192 KKNTGGSKLSQSEMDALRGAISKCWNVPAGVADAPGLVVTVKMKLAEDGSIQGTPEVTSG 251
Query: 226 GGTELVRRMLRENARKAVIKSQAFRLSPSTYKSWRNITLFFVPSKM 271
GG + V R E+AR+AV++ + L Y SW + + F PS+M
Sbjct: 252 GGADGVARAAAESARRAVMRCAPYNLPVDKYDSWSEVIVNFDPSEM 297
>gi|306837840|ref|ZP_07470702.1| tolA protein [Brucella sp. NF 2653]
gi|306407079|gb|EFM63296.1| tolA protein [Brucella sp. NF 2653]
Length = 298
Score = 132 bits (333), Expect = 4e-29, Method: Composition-based stats.
Identities = 30/106 (28%), Positives = 51/106 (48%)
Query: 166 EKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVV 225
+K++ SQ + +R + WN+P+ L V + +L + G + G V
Sbjct: 192 KKNTGGSKLSQSEMDALRGAISKCWNVPAGVADAPGLVVTVKMKLAEDGSIQGTPEVTSG 251
Query: 226 GGTELVRRMLRENARKAVIKSQAFRLSPSTYKSWRNITLFFVPSKM 271
GG + V R E+AR+AV++ + L Y SW + + F PS+M
Sbjct: 252 GGADGVARAAAESARRAVMRCAPYNLPVDKYDSWSEVIVNFDPSEM 297
>gi|225853153|ref|YP_002733386.1| hypothetical protein BMEA_A1750 [Brucella melitensis ATCC 23457]
gi|256045308|ref|ZP_05448202.1| hypothetical protein Bmelb1R_12512 [Brucella melitensis bv. 1 str.
Rev.1]
gi|256114266|ref|ZP_05455011.1| hypothetical protein Bmelb3E_15733 [Brucella melitensis bv. 3 str.
Ether]
gi|256263355|ref|ZP_05465887.1| TolA protein [Brucella melitensis bv. 2 str. 63/9]
gi|260565801|ref|ZP_05836284.1| TolA protein [Brucella melitensis bv. 1 str. 16M]
gi|265991733|ref|ZP_06104290.1| TolA protein [Brucella melitensis bv. 1 str. Rev.1]
gi|265995570|ref|ZP_06108127.1| TolA protein [Brucella melitensis bv. 3 str. Ether]
gi|13898975|gb|AAK48917.1|AF358662_4 TolA protein [Brucella melitensis]
gi|225641518|gb|ACO01432.1| Protein TsetseEP precursor [Brucella melitensis ATCC 23457]
gi|260151174|gb|EEW86269.1| TolA protein [Brucella melitensis bv. 1 str. 16M]
gi|262766854|gb|EEZ12472.1| TolA protein [Brucella melitensis bv. 3 str. Ether]
gi|263002689|gb|EEZ15092.1| TolA protein [Brucella melitensis bv. 1 str. Rev.1]
gi|263093354|gb|EEZ17423.1| TolA protein [Brucella melitensis bv. 2 str. 63/9]
gi|326409711|gb|ADZ66776.1| TolA, tolA protein [Brucella melitensis M28]
gi|326539418|gb|ADZ87633.1| protein TsetseEP precursor [Brucella melitensis M5-90]
Length = 356
Score = 132 bits (333), Expect = 4e-29, Method: Composition-based stats.
Identities = 30/106 (28%), Positives = 51/106 (48%)
Query: 166 EKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVV 225
+K++ SQ + +R + WN+P+ L V + +L + G + G V
Sbjct: 250 KKNTGGSKLSQSEMDALRGAISKCWNVPAGVADAPGLVVTVKMKLAEDGSIQGTPEVTSG 309
Query: 226 GGTELVRRMLRENARKAVIKSQAFRLSPSTYKSWRNITLFFVPSKM 271
GG + V R E+AR+AV++ + L Y SW + + F PS+M
Sbjct: 310 GGADGVARAAAESARRAVMRCAPYNLPVDKYDSWSEVIVNFDPSEM 355
>gi|254708712|ref|ZP_05170523.1| hypothetical protein BpinB_00336 [Brucella pinnipedialis B2/94]
gi|254714559|ref|ZP_05176370.1| hypothetical protein BcetM6_14712 [Brucella ceti M644/93/1]
gi|254717456|ref|ZP_05179267.1| hypothetical protein BcetM_13836 [Brucella ceti M13/05/1]
gi|256030238|ref|ZP_05443852.1| hypothetical protein BpinM2_06256 [Brucella pinnipedialis
M292/94/1]
gi|261219287|ref|ZP_05933568.1| TolA protein [Brucella ceti M13/05/1]
gi|261316203|ref|ZP_05955400.1| TolA protein [Brucella pinnipedialis B2/94]
gi|261322348|ref|ZP_05961545.1| TolA protein [Brucella ceti M644/93/1]
gi|265987266|ref|ZP_06099823.1| TolA protein [Brucella pinnipedialis M292/94/1]
gi|260924376|gb|EEX90944.1| TolA protein [Brucella ceti M13/05/1]
gi|261295038|gb|EEX98534.1| TolA protein [Brucella ceti M644/93/1]
gi|261295426|gb|EEX98922.1| TolA protein [Brucella pinnipedialis B2/94]
gi|264659463|gb|EEZ29724.1| TolA protein [Brucella pinnipedialis M292/94/1]
Length = 356
Score = 132 bits (332), Expect = 4e-29, Method: Composition-based stats.
Identities = 30/106 (28%), Positives = 51/106 (48%)
Query: 166 EKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVV 225
+K++ SQ + +R + WN+P+ L V + +L + G + G V
Sbjct: 250 KKNTGGSKLSQSEMDALRGAISKCWNVPAGVADAPGLVVTVKMKLAEDGSIQGTPEVTSG 309
Query: 226 GGTELVRRMLRENARKAVIKSQAFRLSPSTYKSWRNITLFFVPSKM 271
GG + V R E+AR+AV++ + L Y SW + + F PS+M
Sbjct: 310 GGADGVARAAAESARRAVMRCAPYNLPVDKYDSWSEVIVNFDPSEM 355
>gi|62290570|ref|YP_222363.1| TolA protein [Brucella abortus bv. 1 str. 9-941]
gi|82700486|ref|YP_415060.1| hypothetical protein BAB1_1710 [Brucella melitensis biovar Abortus
2308]
gi|237816075|ref|ZP_04595071.1| Protein TsetseEP precursor [Brucella abortus str. 2308 A]
gi|254689866|ref|ZP_05153120.1| hypothetical protein Babob68_06802 [Brucella abortus bv. 6 str.
870]
gi|254694359|ref|ZP_05156187.1| hypothetical protein Babob3T_06812 [Brucella abortus bv. 3 str.
Tulya]
gi|254698017|ref|ZP_05159845.1| hypothetical protein Babob28_09998 [Brucella abortus bv. 2 str.
86/8/59]
gi|254730901|ref|ZP_05189479.1| hypothetical protein Babob42_06837 [Brucella abortus bv. 4 str.
292]
gi|256258120|ref|ZP_05463656.1| hypothetical protein Babob9C_12404 [Brucella abortus bv. 9 str.
C68]
gi|260547186|ref|ZP_05822924.1| TolA protein [Brucella abortus NCTC 8038]
gi|260755397|ref|ZP_05867745.1| TolA protein [Brucella abortus bv. 6 str. 870]
gi|260758619|ref|ZP_05870967.1| TolA protein [Brucella abortus bv. 4 str. 292]
gi|260762451|ref|ZP_05874788.1| TolA protein [Brucella abortus bv. 2 str. 86/8/59]
gi|260884413|ref|ZP_05896027.1| TolA protein [Brucella abortus bv. 9 str. C68]
gi|261214668|ref|ZP_05928949.1| TolA protein [Brucella abortus bv. 3 str. Tulya]
gi|297248969|ref|ZP_06932677.1| hypothetical protein BAYG_03010 [Brucella abortus bv. 5 str. B3196]
gi|62196702|gb|AAX75002.1| TolA, tolA protein [Brucella abortus bv. 1 str. 9-941]
gi|82616587|emb|CAJ11666.1| Proline-rich region:Proline-rich extensin:Histamine H3 receptor
[Brucella melitensis biovar Abortus 2308]
gi|237788738|gb|EEP62950.1| Protein TsetseEP precursor [Brucella abortus str. 2308 A]
gi|260095551|gb|EEW79429.1| TolA protein [Brucella abortus NCTC 8038]
gi|260668937|gb|EEX55877.1| TolA protein [Brucella abortus bv. 4 str. 292]
gi|260672877|gb|EEX59698.1| TolA protein [Brucella abortus bv. 2 str. 86/8/59]
gi|260675505|gb|EEX62326.1| TolA protein [Brucella abortus bv. 6 str. 870]
gi|260873941|gb|EEX81010.1| TolA protein [Brucella abortus bv. 9 str. C68]
gi|260916275|gb|EEX83136.1| TolA protein [Brucella abortus bv. 3 str. Tulya]
gi|297174102|gb|EFH33459.1| hypothetical protein BAYG_03010 [Brucella abortus bv. 5 str. B3196]
Length = 356
Score = 132 bits (332), Expect = 5e-29, Method: Composition-based stats.
Identities = 30/106 (28%), Positives = 51/106 (48%)
Query: 166 EKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVV 225
+K++ SQ + +R + WN+P+ L V + +L + G + G V
Sbjct: 250 KKNTGGSKLSQSEMDALRGAISKCWNVPAGVADAPGLVVTVKMKLAEDGSIQGTPEVTSG 309
Query: 226 GGTELVRRMLRENARKAVIKSQAFRLSPSTYKSWRNITLFFVPSKM 271
GG + V R E+AR+AV++ + L Y SW + + F PS+M
Sbjct: 310 GGADGVARAAAESARRAVMRCAPYNLPVDKYDSWSEVIVNFDPSEM 355
>gi|254719701|ref|ZP_05181512.1| hypothetical protein Bru83_09188 [Brucella sp. 83/13]
gi|265984715|ref|ZP_06097450.1| TolA protein [Brucella sp. 83/13]
gi|264663307|gb|EEZ33568.1| TolA protein [Brucella sp. 83/13]
Length = 356
Score = 132 bits (332), Expect = 5e-29, Method: Composition-based stats.
Identities = 30/106 (28%), Positives = 51/106 (48%)
Query: 166 EKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVV 225
+K++ SQ + +R + WN+P+ L V + +L + G + G V
Sbjct: 250 KKNTGGSKLSQSEMDALRGAISKCWNVPAGVADAPGLVVTVKMKLAEDGSIQGTPEVTSG 309
Query: 226 GGTELVRRMLRENARKAVIKSQAFRLSPSTYKSWRNITLFFVPSKM 271
GG + V R E+AR+AV++ + L Y SW + + F PS+M
Sbjct: 310 GGADGVARAAAESARRAVMRCAPYNLPVDKYDSWSEVIVNFDPSEM 355
>gi|306844690|ref|ZP_07477275.1| tolA protein [Brucella sp. BO1]
gi|306274862|gb|EFM56632.1| tolA protein [Brucella sp. BO1]
Length = 298
Score = 132 bits (332), Expect = 5e-29, Method: Composition-based stats.
Identities = 30/106 (28%), Positives = 51/106 (48%)
Query: 166 EKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVV 225
+K++ SQ + +R + WN+P+ L V + +L + G + G V
Sbjct: 192 KKNTGGSKLSQSEMDALRGAISKCWNVPAGVADAPGLVVTVKMKLAEDGSIQGTPEVTSG 251
Query: 226 GGTELVRRMLRENARKAVIKSQAFRLSPSTYKSWRNITLFFVPSKM 271
GG + V R E+AR+AV++ + L Y SW + + F PS+M
Sbjct: 252 GGADGVARAAAESARRAVMRCAPYNLPVDKYDSWSEVIVNFDPSEM 297
>gi|23502556|ref|NP_698683.1| tolA protein [Brucella suis 1330]
gi|161619627|ref|YP_001593514.1| TolA protein [Brucella canis ATCC 23365]
gi|163845277|ref|YP_001622932.1| hypothetical protein BSUIS_B1173 [Brucella suis ATCC 23445]
gi|254700359|ref|ZP_05162187.1| hypothetical protein Bsuib55_05814 [Brucella suis bv. 5 str. 513]
gi|254703476|ref|ZP_05165304.1| hypothetical protein Bsuib36_06042 [Brucella suis bv. 3 str. 686]
gi|256370107|ref|YP_003107618.1| tolA protein [Brucella microti CCM 4915]
gi|261750853|ref|ZP_05994562.1| TolA protein [Brucella suis bv. 5 str. 513]
gi|261754106|ref|ZP_05997815.1| TolA protein [Brucella suis bv. 3 str. 686]
gi|294850949|ref|ZP_06791625.1| hypothetical protein BAZG_03079 [Brucella sp. NVSL 07-0026]
gi|23348556|gb|AAN30598.1| tolA protein [Brucella suis 1330]
gi|161336438|gb|ABX62743.1| TolA protein [Brucella canis ATCC 23365]
gi|163676000|gb|ABY40110.1| Hypothetical protein, conserved [Brucella suis ATCC 23445]
gi|256000270|gb|ACU48669.1| tolA protein [Brucella microti CCM 4915]
gi|261740606|gb|EEY28532.1| TolA protein [Brucella suis bv. 5 str. 513]
gi|261743859|gb|EEY31785.1| TolA protein [Brucella suis bv. 3 str. 686]
gi|294821592|gb|EFG38588.1| hypothetical protein BAZG_03079 [Brucella sp. NVSL 07-0026]
Length = 356
Score = 132 bits (332), Expect = 5e-29, Method: Composition-based stats.
Identities = 30/106 (28%), Positives = 51/106 (48%)
Query: 166 EKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVV 225
+K++ SQ + +R + WN+P+ L V + +L + G + G V
Sbjct: 250 KKNTGGSKLSQSEMDALRGAISKCWNVPAGVADAPGLVVTVKMKLAEDGSIQGTPEVTSG 309
Query: 226 GGTELVRRMLRENARKAVIKSQAFRLSPSTYKSWRNITLFFVPSKM 271
GG + V R E+AR+AV++ + L Y SW + + F PS+M
Sbjct: 310 GGADGVARAAAESARRAVMRCAPYNLPVDKYDSWSEVIVNFDPSEM 355
>gi|304393325|ref|ZP_07375253.1| TolA protein [Ahrensia sp. R2A130]
gi|303294332|gb|EFL88704.1| TolA protein [Ahrensia sp. R2A130]
Length = 343
Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats.
Identities = 46/195 (23%), Positives = 74/195 (37%), Gaps = 15/195 (7%)
Query: 80 ENGDRFSDQTKTHATENETKRSSSSKGEQAL-KESALLRMPVSPYDKQKISKATNKEQDL 138
+ ++ T+T A + K +A A P D K + NK +
Sbjct: 160 KENQPVAEPTETQADPDVLKLPDQVAAPKARPTRPAPEAAPAKETDATKKA-TVNKAETS 218
Query: 139 QGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIP--SDF 196
G + A K +K L +K +S K SQ I VR R+ WN+ S
Sbjct: 219 GGGAKASTK---------EKAGLGTKKGATSGK--LSQSTIDAVRGRLSGCWNVAALSGH 267
Query: 197 KRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPSTY 256
K+R + F+LN+ G + G++ G R +L R A+ + L Y
Sbjct: 268 PDAAKMRATVDFKLNRDGTIDGRVRPKTSGTDGPTRAILAVAVRSAIESCAPYNLPADKY 327
Query: 257 KSWRNITLFFVPSKM 271
+W+ T+ F + M
Sbjct: 328 DTWKEFTVNFSLADM 342
>gi|148559086|ref|YP_001259550.1| tolA protein [Brucella ovis ATCC 25840]
gi|148370343|gb|ABQ60322.1| tolA protein [Brucella ovis ATCC 25840]
Length = 356
Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats.
Identities = 30/106 (28%), Positives = 51/106 (48%)
Query: 166 EKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVV 225
+K++ SQ + +R + WN+P+ L V + +L + G + G V
Sbjct: 250 KKNTGGSKLSQSEMDALRGAISKCWNVPTGVADAPGLVVTVKMKLAEDGSIQGTPEVTSG 309
Query: 226 GGTELVRRMLRENARKAVIKSQAFRLSPSTYKSWRNITLFFVPSKM 271
GG + V R E+AR+AV++ + L Y SW + + F PS+M
Sbjct: 310 GGADGVARAAAESARRAVMRCAPYNLPVDKYDSWSEVIVNFDPSEM 355
>gi|225628266|ref|ZP_03786300.1| Protein TsetseEP precursor [Brucella ceti str. Cudo]
gi|256160413|ref|ZP_05458102.1| hypothetical protein BcetM4_15504 [Brucella ceti M490/95/1]
gi|256255619|ref|ZP_05461155.1| hypothetical protein BcetB_15323 [Brucella ceti B1/94]
gi|260167913|ref|ZP_05754724.1| tolA protein [Brucella sp. F5/99]
gi|261222822|ref|ZP_05937103.1| TolA protein [Brucella ceti B1/94]
gi|261757351|ref|ZP_06001060.1| TolA protein [Brucella sp. F5/99]
gi|265998781|ref|ZP_06111338.1| TolA protein [Brucella ceti M490/95/1]
gi|225616112|gb|EEH13160.1| Protein TsetseEP precursor [Brucella ceti str. Cudo]
gi|260921406|gb|EEX88059.1| TolA protein [Brucella ceti B1/94]
gi|261737335|gb|EEY25331.1| TolA protein [Brucella sp. F5/99]
gi|262553470|gb|EEZ09239.1| TolA protein [Brucella ceti M490/95/1]
Length = 356
Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats.
Identities = 30/106 (28%), Positives = 51/106 (48%)
Query: 166 EKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVV 225
+K++ SQ + +R + WN+P+ L V + +L + G + G V
Sbjct: 250 KKNTGGSKLSQSEMDALRGAISKCWNVPAGVADAPGLVVTVKMKLAEDGSIQGTPEVTSG 309
Query: 226 GGTELVRRMLRENARKAVIKSQAFRLSPSTYKSWRNITLFFVPSKM 271
GG + V R E+AR+AV++ + L Y SW + + F PS+M
Sbjct: 310 GGADGVARAAAESARRAVMRCAPYNLPVDKYNSWSEVIVNFDPSEM 355
>gi|86359055|ref|YP_470947.1| signal peptide protein [Rhizobium etli CFN 42]
gi|86283157|gb|ABC92220.1| probable signal peptide protein [Rhizobium etli CFN 42]
Length = 380
Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats.
Identities = 44/196 (22%), Positives = 82/196 (41%), Gaps = 17/196 (8%)
Query: 90 KTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKS- 148
K E ++++ E+ E + P DK+K K + +
Sbjct: 186 KPQVKPPEPRKAAEKPPEKPADE---PKAAEKPTDKKKADKKQEVAKSASTMKSDFNADE 242
Query: 149 IDTVVVRPDKKELLSKV---------EKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRF 199
I ++ + D +K +KS+ SQ VR+++ +NW++ S
Sbjct: 243 ISALLNKTDPSAGGAKRSTQEASLGNKKSNSGAKLSQSEEDAVRSQISSNWSVVSGLAGA 302
Query: 200 KKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSP-STYK- 257
++++++ FQL+Q G V+G V GG E R+ L+ + +AV+KS + P Y+
Sbjct: 303 SEVQLQVRFQLDQAGNVVGDPEVIATGGPESTRQALKSSVYRAVMKSSPLKNLPADKYEG 362
Query: 258 --SWRNITLFFVPSKM 271
W + L F S +
Sbjct: 363 ENGWNEMRLTFDASDL 378
>gi|260568783|ref|ZP_05839251.1| TolA protein [Brucella suis bv. 4 str. 40]
gi|260154167|gb|EEW89249.1| TolA protein [Brucella suis bv. 4 str. 40]
Length = 356
Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats.
Identities = 30/106 (28%), Positives = 51/106 (48%)
Query: 166 EKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVV 225
+K++ SQ + +R + WN+P+ L V + +L + G + G V
Sbjct: 250 KKNTGDSKLSQSEMDALRGAISKCWNVPAGVADAPGLVVTVKMKLAEDGSIQGTPEVTSG 309
Query: 226 GGTELVRRMLRENARKAVIKSQAFRLSPSTYKSWRNITLFFVPSKM 271
GG + V R E+AR+AV++ + L Y SW + + F PS+M
Sbjct: 310 GGADGVARAAAESARRAVMRCAPYNLPVDKYDSWSEVIVNFDPSEM 355
>gi|256061735|ref|ZP_05451872.1| hypothetical protein Bneo5_15446 [Brucella neotomae 5K33]
gi|261325739|ref|ZP_05964936.1| TolA protein [Brucella neotomae 5K33]
gi|261301719|gb|EEY05216.1| TolA protein [Brucella neotomae 5K33]
Length = 356
Score = 129 bits (323), Expect = 6e-28, Method: Composition-based stats.
Identities = 29/106 (27%), Positives = 50/106 (47%)
Query: 166 EKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVV 225
+K++ SQ + +R + WN+P+ L V + +L + G + G V
Sbjct: 250 KKNTGGSKLSQSEMDALRGAISKCWNVPAGVADAPGLVVTVKMKLAEDGSIQGTPEVTSG 309
Query: 226 GGTELVRRMLRENARKAVIKSQAFRLSPSTYKSWRNITLFFVPSKM 271
GG + V R E+AR+AV++ + L Y SW + + F S+M
Sbjct: 310 GGADGVARAAAESARRAVMRCAPYNLPVDKYDSWSEVIVNFDSSEM 355
>gi|218516342|ref|ZP_03513182.1| outer membrane protein [Rhizobium etli 8C-3]
Length = 358
Score = 128 bits (321), Expect = 9e-28, Method: Composition-based stats.
Identities = 41/197 (20%), Positives = 75/197 (38%), Gaps = 18/197 (9%)
Query: 90 KTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKS- 148
K E ++ + E+ E + P DK+K K + +
Sbjct: 163 KPQVKPPEPQKPAEKPPEKTPDE---PKAAEKPTDKKKADKKQEVAKSASSMKSDFNADE 219
Query: 149 IDTVVVRPDKKELLSK---------VEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRF 199
I ++ + D +K +KS+ SQ ++ + NW I +
Sbjct: 220 ISALLNKTDPSAGGAKRSTQEASLGAKKSNNGSKLSQSEEDALKGLIEGNWLITPGMEGL 279
Query: 200 KKLRVKMHFQLNQKGFVLGKINVD--VVGGTELVRRMLRENARKAVIKSQA---FRLSPS 254
+ + +HF+L++ G ++G+ ++ T+ RR L A +AV+KS L
Sbjct: 280 SGMVITVHFKLDKDGNIIGQPEIESSGGSSTDSTRRALEGGAYRAVMKSAPSFRTNLPMD 339
Query: 255 TYKSWRNITLFFVPSKM 271
Y +W + L F PS M
Sbjct: 340 KYDAWNEVVLNFHPSDM 356
>gi|327193468|gb|EGE60364.1| outer membrane protein [Rhizobium etli CNPAF512]
Length = 345
Score = 127 bits (320), Expect = 1e-27, Method: Composition-based stats.
Identities = 41/197 (20%), Positives = 75/197 (38%), Gaps = 18/197 (9%)
Query: 90 KTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKS- 148
K E ++ + E+ E + P DK+K K + +
Sbjct: 150 KPQVKPPEPQKPAEKPPEKTPDE---PKAAEKPTDKKKADKKQEVAKSASSMKSDFNADE 206
Query: 149 IDTVVVRPDKKELLSK---------VEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRF 199
I ++ + D +K +KS+ SQ ++ + NW I +
Sbjct: 207 ISALLNKTDPSAGGAKRSTQEASLGAKKSNNGSKLSQSEEDALKGLIEGNWLITPGMEGL 266
Query: 200 KKLRVKMHFQLNQKGFVLGKINVD--VVGGTELVRRMLRENARKAVIKSQA---FRLSPS 254
+ + +HF+L++ G ++G+ ++ T+ RR L A +AV+KS L
Sbjct: 267 SGMVITVHFKLDKDGNIIGQPEIESSGGSSTDSTRRALEGGAYRAVMKSAPSFRTNLPMD 326
Query: 255 TYKSWRNITLFFVPSKM 271
Y +W + L F PS M
Sbjct: 327 KYDAWNEVVLNFHPSDM 343
>gi|110635501|ref|YP_675709.1| TolA, TolA protein [Mesorhizobium sp. BNC1]
gi|110286485|gb|ABG64544.1| Cell division and transport-associated protein TolA [Chelativorans
sp. BNC1]
Length = 351
Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats.
Identities = 35/149 (23%), Positives = 73/149 (48%), Gaps = 2/149 (1%)
Query: 124 DKQKISKATNKEQDLQGISFAEKKSIDTVV-VRPDKKELLSKVEKSSRKRIPSQDAIAIV 182
++++ S+AT +Q L ++ K + + ++ +++ SQ + +
Sbjct: 203 EQKQASRATKDDQVLDQVAALLNKEKASGGGAKRSTEQAALGASQATSGDKLSQSEMDAL 262
Query: 183 RNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKA 242
R ++ WN+P+ + LRV + F+L+ G V G+ + + GG V R E+AR+A
Sbjct: 263 RAQIERCWNVPAGALDAENLRVSVKFKLDPSGAVEGRPEI-IEGGGSGVARAAAESARRA 321
Query: 243 VIKSQAFRLSPSTYKSWRNITLFFVPSKM 271
V++ + L Y +W ++ + F P+ M
Sbjct: 322 VLQCAPYNLPSEKYSAWADVIVHFDPTDM 350
>gi|118588327|ref|ZP_01545736.1| hypothetical protein SIAM614_23637 [Stappia aggregata IAM 12614]
gi|118439033|gb|EAV45665.1| hypothetical protein SIAM614_23637 [Stappia aggregata IAM 12614]
Length = 320
Score = 124 bits (312), Expect = 1e-26, Method: Composition-based stats.
Identities = 34/158 (21%), Positives = 67/158 (42%), Gaps = 3/158 (1%)
Query: 114 ALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRI 173
+ P P + + K +D+ + + + T ++ L S+ + +
Sbjct: 163 SPRSKPTPPRNAPEPPKENFNSKDVAALLNKIEPAKQTGETSQNEASLGSR--RGQQDVR 220
Query: 174 PSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRR 233
SQ + +R V WN P + L+V++ F L+Q G V G+ V G
Sbjct: 221 MSQSELDALRGMVAQCWNPPVGAVGAEDLKVRVRFNLSQDGQVSGQPEVMNSSGN-PAFG 279
Query: 234 MLRENARKAVIKSQAFRLSPSTYKSWRNITLFFVPSKM 271
+A +A+++ Q + L S Y++W+ + + F P +M
Sbjct: 280 AASSSAVRAIMRCQPYNLPISKYEAWQEVIINFDPREM 317
>gi|90418975|ref|ZP_01226886.1| putative TolA [Aurantimonas manganoxydans SI85-9A1]
gi|90337055|gb|EAS50760.1| putative TolA [Aurantimonas manganoxydans SI85-9A1]
Length = 357
Score = 124 bits (312), Expect = 1e-26, Method: Composition-based stats.
Identities = 34/151 (22%), Positives = 65/151 (43%), Gaps = 13/151 (8%)
Query: 121 SPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIA 180
S +D +I+ NKE+ G + K+S + D+ SQ +
Sbjct: 219 SQFDADQIAALLNKEKSAGGGA---KRSDQQASLGTDR----------QTGGKLSQSELD 265
Query: 181 IVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENAR 240
+R ++ W+ PS LR+ + +L+ G + + + GG ++ R+ E A
Sbjct: 266 ALRGQIQRCWSPPSGVSEAGSLRISIQMRLDPSGELEARPQIIGGGGGSMIERVAGEAAL 325
Query: 241 KAVIKSQAFRLSPSTYKSWRNITLFFVPSKM 271
+AV + + L Y +W ++ + F PS+M
Sbjct: 326 RAVQRCAPYNLPAEKYDTWADVVVNFDPSQM 356
>gi|209550778|ref|YP_002282695.1| outer membrane protein [Rhizobium leguminosarum bv. trifolii
WSM2304]
gi|209536534|gb|ACI56469.1| outer membrane protein [Rhizobium leguminosarum bv. trifolii
WSM2304]
Length = 381
Score = 124 bits (311), Expect = 1e-26, Method: Composition-based stats.
Identities = 41/198 (20%), Positives = 76/198 (38%), Gaps = 18/198 (9%)
Query: 89 TKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISF-AEKK 147
K E ++ + E K + +P DK+K K + +
Sbjct: 185 AKPQVKPPEPQKPAEKPPE---KTPDQPKTADTPTDKKKADKKQEVAKSASSMKSDFNAD 241
Query: 148 SIDTVVVRPDKKELLSK---------VEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKR 198
I ++ + D +K +KS+ SQ ++ + NW + +
Sbjct: 242 DISALLNKTDPSAGGAKRSTQEASLGAKKSNNGSKLSQSEEDALKGLIEGNWLVTPGMEG 301
Query: 199 FKKLRVKMHFQLNQKGFVLGKINVD--VVGGTELVRRMLRENARKAVIKSQA---FRLSP 253
+ +K+HF+L++ G ++G+ ++ T+ RR L A +AV+KS + L
Sbjct: 302 VSGMVIKVHFKLDKDGNIIGQPEIESSGGSSTDSTRRALESGAYRAVMKSASSFRTTLPM 361
Query: 254 STYKSWRNITLFFVPSKM 271
Y W + L F PS M
Sbjct: 362 DKYDVWNEVVLNFNPSDM 379
>gi|328542543|ref|YP_004302652.1| TolA protein [polymorphum gilvum SL003B-26A1]
gi|326412289|gb|ADZ69352.1| TolA protein [Polymorphum gilvum SL003B-26A1]
Length = 325
Score = 124 bits (311), Expect = 1e-26, Method: Composition-based stats.
Identities = 24/98 (24%), Positives = 47/98 (47%), Gaps = 1/98 (1%)
Query: 174 PSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRR 233
SQ + +R ++ WN P L V++ FQL G V G V + + R
Sbjct: 226 MSQSELDALRGQISRCWNPPVGAAGADDLLVRLQFQLTVDGAVDGSPRV-LNSSSNPSFR 284
Query: 234 MLRENARKAVIKSQAFRLSPSTYKSWRNITLFFVPSKM 271
++A +AV++ + L + Y++W+++ + F P ++
Sbjct: 285 AASDSAVRAVMRCAPYSLPGNKYETWKDVIINFDPREL 322
>gi|298292995|ref|YP_003694934.1| TolA [Starkeya novella DSM 506]
gi|296929506|gb|ADH90315.1| putative TolA [Starkeya novella DSM 506]
Length = 320
Score = 124 bits (310), Expect = 2e-26, Method: Composition-based stats.
Identities = 29/106 (27%), Positives = 52/106 (49%), Gaps = 2/106 (1%)
Query: 167 KSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVG 226
+ SQ I +R R++ WN P+ ++L V + +LN G + G V V
Sbjct: 213 RVGSSATLSQTEIDALRARLMQLWNPPAGAANPEELIVTVRIRLNVDGTLNGPPMV-VTS 271
Query: 227 GTELVRRMLRENARKAVIKSQAFRLS-PSTYKSWRNITLFFVPSKM 271
G+ R++A +A+ + Q F + P Y++W++I + F P +M
Sbjct: 272 GSSPFFMTARDSAIRAIFRGQPFDMLRPEKYEAWKDIEVTFDPREM 317
>gi|218460855|ref|ZP_03500946.1| outer membrane protein [Rhizobium etli Kim 5]
Length = 352
Score = 123 bits (308), Expect = 3e-26, Method: Composition-based stats.
Identities = 41/197 (20%), Positives = 74/197 (37%), Gaps = 18/197 (9%)
Query: 90 KTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKS- 148
K E ++ + E K + +P DK+K K + +
Sbjct: 157 KPQVKPPEPQKPAEKPPE---KTPDQPKAAEAPTDKKKADKKQEVAKSASSMKSDFNADE 213
Query: 149 IDTVVVRPDKKELLSK---------VEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRF 199
I ++ + D +K +KS+ SQ ++ + NW I +
Sbjct: 214 ISALLNKTDPSAGGAKRSTQEASLGAKKSNGASKLSQSEEDALKGLIEGNWLITPGMEGL 273
Query: 200 KKLRVKMHFQLNQKGFVLGKINVD--VVGGTELVRRMLRENARKAVIKSQA---FRLSPS 254
+ + +HF+L++ G ++G+ ++ T+ RR L A +AV+KS L
Sbjct: 274 SGMVITVHFKLDKDGNIIGQPEIESSGGSSTDSTRRALESGAYRAVMKSAPSFRTNLPMD 333
Query: 255 TYKSWRNITLFFVPSKM 271
Y W + L F PS M
Sbjct: 334 KYDVWNEVVLNFHPSDM 350
>gi|307944544|ref|ZP_07659884.1| TolA, TolA protein [Roseibium sp. TrichSKD4]
gi|307772293|gb|EFO31514.1| TolA, TolA protein [Roseibium sp. TrichSKD4]
Length = 301
Score = 116 bits (291), Expect = 3e-24, Method: Composition-based stats.
Identities = 35/145 (24%), Positives = 62/145 (42%), Gaps = 13/145 (8%)
Query: 127 KISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRV 186
+IS NK + G S A ++ V + V+ + Q + +R +V
Sbjct: 167 QISALLNKVEPEGGASSASQE-----PVSLGSRRGQENVQMT-------QSELDALRGQV 214
Query: 187 IANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKS 246
A WN P + LRV++ F L+Q G V G V + + R +A +A+++
Sbjct: 215 SACWNPPVGAAGAEDLRVRVRFNLDQSGGVSGSPEV-INNSSNPAFRAAASSAVRAIMRC 273
Query: 247 QAFRLSPSTYKSWRNITLFFVPSKM 271
+ L + Y +W + L F P ++
Sbjct: 274 APYSLPIAKYDAWEEVILNFDPKEL 298
>gi|209550777|ref|YP_002282694.1| signal peptide protein [Rhizobium leguminosarum bv. trifolii
WSM2304]
gi|209536533|gb|ACI56468.1| putative signal peptide protein [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 148
Score = 111 bits (278), Expect = 8e-23, Method: Composition-based stats.
Identities = 22/113 (19%), Positives = 48/113 (42%), Gaps = 1/113 (0%)
Query: 160 ELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGK 219
E + S+ + I +R+ + N+ + + +H +L++ G ++G
Sbjct: 34 ETTGRANDSATATHLTGAEIDALRDAIENNFVVDGRMNDDGNVYATIHVKLDRDGQIVGV 93
Query: 220 INVDVVGGTELVRRMLRENARKAVIKSQAFRLSP-STYKSWRNITLFFVPSKM 271
+V GG+E R+ +A+ ++ F + P Y W+ + L F S +
Sbjct: 94 PDVKASGGSERTRKSFAAAGVRAIRRAAPFTMLPKDKYDGWKEVILNFDTSAL 146
>gi|222086975|ref|YP_002545509.1| signal peptide protein [Agrobacterium radiobacter K84]
gi|221724423|gb|ACM27579.1| signal peptide protein [Agrobacterium radiobacter K84]
Length = 410
Score = 108 bits (270), Expect = 7e-22, Method: Composition-based stats.
Identities = 24/108 (22%), Positives = 51/108 (47%), Gaps = 3/108 (2%)
Query: 167 KSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVG 226
KS SQ +R+ + WN+ + +R+K+HF+L++ G ++G+ G
Sbjct: 301 KSLGGGKLSQSQQDGLRDLIAKYWNLMPGLEGAGDVRIKVHFRLDKSGQIVGEPEATTSG 360
Query: 227 GTELVRRMLRENARKAVIKSQA---FRLSPSTYKSWRNITLFFVPSKM 271
G + ++ A +AV+++Q+ L Y W+ + + F + +
Sbjct: 361 GPASTQSAMQSAAVRAVMRAQSDYLKVLPVDKYDDWQEVVVNFSAADL 408
>gi|154252568|ref|YP_001413392.1| hypothetical protein Plav_2121 [Parvibaculum lavamentivorans DS-1]
gi|154156518|gb|ABS63735.1| hypothetical protein Plav_2121 [Parvibaculum lavamentivorans DS-1]
Length = 277
Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 34/154 (22%), Positives = 60/154 (38%), Gaps = 17/154 (11%)
Query: 123 YDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIV 182
+D +I+ +K D ++E S V + I
Sbjct: 133 FDPNQIAALLDKTPDTSSKPQ---------PQEQAEEEFDSPV-TDDPSAALTMSEIDAF 182
Query: 183 RNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVD-----VVGGTELVRRMLRE 237
+ ++ W++P+ ++L VK+ LNQ G + + V GG+ R +
Sbjct: 183 KVQMRRCWSVPAGAPDAEQLIVKIKVYLNQDGSLAAPPELRDKTKLVTGGS--YYRAAAD 240
Query: 238 NARKAVIKSQAFRLSPSTYKSWRNITLFFVPSKM 271
+A +A+ Q F++ Y SWR I L F P +M
Sbjct: 241 SAMRAIRLCQPFKMPAEKYTSWREIDLNFDPREM 274
>gi|218672946|ref|ZP_03522615.1| putative signal peptide protein [Rhizobium etli GR56]
Length = 155
Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats.
Identities = 25/113 (22%), Positives = 52/113 (46%), Gaps = 7/113 (6%)
Query: 166 EKSSRKRI------PSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGK 219
E + R+ S ++RN + + + S K +R+ + +L + G ++G
Sbjct: 41 ETADRRNSDANSPRISAAEAQVLRNAIERQFIVDSRLKDIGSVRLTIRIKLARDGQIVGN 100
Query: 220 INVDVVGGTELVRRMLRENARKAVIKSQAFRLSP-STYKSWRNITLFFVPSKM 271
+V V GG E ++ L ++ +AV ++ F + P Y +W+ + F S +
Sbjct: 101 PDVQVTGGGERAQKSLTDSGLRAVRRAAPFTMLPKDKYDAWKEVVFNFDTSAL 153
>gi|254500624|ref|ZP_05112775.1| hypothetical protein SADFL11_660 [Labrenzia alexandrii DFL-11]
gi|222436695|gb|EEE43374.1| hypothetical protein SADFL11_660 [Labrenzia alexandrii DFL-11]
Length = 313
Score = 102 bits (255), Expect = 4e-20, Method: Composition-based stats.
Identities = 32/170 (18%), Positives = 68/170 (40%), Gaps = 6/170 (3%)
Query: 107 EQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTV-VVRPDKKELLSKV 165
++A + ++P K + +E + I ++ V + +
Sbjct: 142 QEAAPAVQPILTSIAPRTKPAPPRPQRQEPRDESIVSDVAALLNKVEPAGQTGGQPETPA 201
Query: 166 EKSSRKRIP----SQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKIN 221
+R+ P +Q + +R++V W+ P + L V++ F L+Q G V
Sbjct: 202 SLGTRQGTPNIRMTQSELDALRSQVAMCWSPPVGAVGAEDLNVRVRFNLSQNGEVSNGPE 261
Query: 222 VDVVGGTELVRRMLRENARKAVIKSQAFRLSPSTYKSWRNITLFFVPSKM 271
V + R +A +AV++ Q + L + Y +W+ + + F P +M
Sbjct: 262 V-MNSNANPAFRAAASSAVRAVMRCQPYSLPIAKYDAWQEVIINFDPREM 310
>gi|327193467|gb|EGE60363.1| putative signal peptide protein [Rhizobium etli CNPAF512]
Length = 132
Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats.
Identities = 24/122 (19%), Positives = 55/122 (45%), Gaps = 3/122 (2%)
Query: 153 VVRPDKKELLSKVEKSSRKRIP--SQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQL 210
P + ++S P S + +R+ + + + + K +R+ +H +L
Sbjct: 9 PAFPFDANAEAADRRNSDANSPRISVAEVQALRDAIERQYFVDNRLKDIDSVRLTIHIKL 68
Query: 211 NQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSP-STYKSWRNITLFFVPS 269
+ G ++G +V V GG+E ++ L ++ +AV ++ F + P Y +W+ + F
Sbjct: 69 ARDGQIVGNPDVQVTGGSERAQKSLTDSGLRAVRRAAPFTMLPKDKYDAWKEVVFNFDTG 128
Query: 270 KM 271
+
Sbjct: 129 AL 130
>gi|254472921|ref|ZP_05086319.1| TolA protein [Pseudovibrio sp. JE062]
gi|211957642|gb|EEA92844.1| TolA protein [Pseudovibrio sp. JE062]
Length = 311
Score = 99.4 bits (246), Expect = 4e-19, Method: Composition-based stats.
Identities = 26/98 (26%), Positives = 45/98 (45%), Gaps = 1/98 (1%)
Query: 174 PSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRR 233
SQ + +R +V WN P + L V++ F L++ G V G++ V + R
Sbjct: 212 MSQSELDALRGQVAQCWNPPVGAAGAEDLNVRLQFNLSRTGEVEGQMQV-LNSSNNPTFR 270
Query: 234 MLRENARKAVIKSQAFRLSPSTYKSWRNITLFFVPSKM 271
+A +AV + + L + Y +W+ + L F P M
Sbjct: 271 AAASSAERAVYRCGPYSLPAAKYDAWKTVILNFDPRDM 308
>gi|255264561|ref|ZP_05343903.1| possible TolA protein [Thalassiobium sp. R2A62]
gi|255106896|gb|EET49570.1| possible TolA protein [Thalassiobium sp. R2A62]
Length = 367
Score = 98.6 bits (244), Expect = 7e-19, Method: Composition-based stats.
Identities = 31/108 (28%), Positives = 50/108 (46%), Gaps = 4/108 (3%)
Query: 167 KSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKIN-VDVV 225
+ S R V WN+ + R ++ VK+ F L+Q G V G + V
Sbjct: 258 STPTGPPLSGAEKEGFRIAVNNCWNVDAG-SRAAEVTVKVGFALDQNGRVSGDVRMVGAS 316
Query: 226 GGTELVRRMLRENARKAVIKSQA--FRLSPSTYKSWRNITLFFVPSKM 271
GG +R E AR+AV++ Q+ + L Y+ W+++ + F PS M
Sbjct: 317 GGDTGAQRTAYEAARRAVLRCQSSGYDLPAEKYEQWKDVEITFDPSGM 364
>gi|84516653|ref|ZP_01004012.1| tonB domain protein, putative [Loktanella vestfoldensis SKA53]
gi|84509689|gb|EAQ06147.1| tonB domain protein, putative [Loktanella vestfoldensis SKA53]
Length = 381
Score = 98.6 bits (244), Expect = 9e-19, Method: Composition-based stats.
Identities = 24/105 (22%), Positives = 44/105 (41%), Gaps = 3/105 (2%)
Query: 169 SRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGT 228
+ R V + WN+ ++ V++ F LN+ G + G+ + G
Sbjct: 275 QAGPPMTGSERDSFRIAVNSCWNVDPGSV-AARVIVEVGFTLNRDGTLDGEPRLLSSDGD 333
Query: 229 ELVRRMLRENARKAVIKSQ--AFRLSPSTYKSWRNITLFFVPSKM 271
+ E AR+A+++ Q ++L Y WR + + F PS M
Sbjct: 334 QSATSTAFEAARRAILRCQRGGYQLPADKYDQWREVVITFDPSGM 378
>gi|86359054|ref|YP_470946.1| putative signal peptide protein [Rhizobium etli CFN 42]
gi|86283156|gb|ABC92219.1| putative signal peptide protein [Rhizobium etli CFN 42]
Length = 145
Score = 97.1 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 29/113 (25%), Positives = 62/113 (54%), Gaps = 1/113 (0%)
Query: 160 ELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGK 219
E S+ + + + ++ AI +RN + + +P D K + + H +L++ G V+G
Sbjct: 31 ERKSREDSDQKAPVLTEAAINAMRNAIQDRFFLPGDLKDAGSVHLMFHVRLDKDGRVIGS 90
Query: 220 INVDVVGGTELVRRMLRENARKAVIKSQAFRLSP-STYKSWRNITLFFVPSKM 271
+V GG+E R+++ + AR+A+I++ + + P Y +W+ + L F S++
Sbjct: 91 PEAEVSGGSERTRKIITDAARRAIIRAAPYTMFPKDKYDAWKEVILNFDASQL 143
>gi|114706799|ref|ZP_01439699.1| Proline-rich region:Proline-rich extensin:Histamine H3 receptor
[Fulvimarina pelagi HTCC2506]
gi|114537747|gb|EAU40871.1| Proline-rich region:Proline-rich extensin:Histamine H3 receptor
[Fulvimarina pelagi HTCC2506]
Length = 361
Score = 97.1 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 23/107 (21%), Positives = 42/107 (39%), Gaps = 3/107 (2%)
Query: 167 KSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVG 226
+ + S I +R W PS + + +++ F+L + G + G
Sbjct: 253 RETTGATLSTSEIDALRRATKDCWYEPSGSFGSEGIVIEVSFELERDGTLQTLPRASASG 312
Query: 227 GTELVRRMLRENARKAVIKSQA---FRLSPSTYKSWRNITLFFVPSK 270
G RR ++A +AV ++LS +Y +W +T F P
Sbjct: 313 GDPATRRAYEDSAVRAVRICAQTGRYQLSADSYDAWSELTFNFRPGD 359
>gi|108755185|emb|CAK32577.1| periplasmic protein TonB [uncultured organism]
Length = 296
Score = 95.6 bits (236), Expect = 7e-18, Method: Composition-based stats.
Identities = 29/114 (25%), Positives = 52/114 (45%), Gaps = 3/114 (2%)
Query: 161 LLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVL-GK 219
L S+V + R + I +VR ++ WN+ + K + L +++ +N G V +
Sbjct: 182 LQSQVRRHDADRPITISEIDLVRRQIARCWNLQAGAKEAENLIIEISVAMNPDGTVRHAR 241
Query: 220 INVDVVGGTELVRRMLRENARKAVI--KSQAFRLSPSTYKSWRNITLFFVPSKM 271
I + R E+A +AV+ + Q F+L Y W+ + L F P +M
Sbjct: 242 IQNTDRVAGDPFYRAAAESALRAVLNPRCQPFKLPRDRYDRWQTMALIFDPKEM 295
>gi|126733594|ref|ZP_01749341.1| TonB domain protein, putative [Roseobacter sp. CCS2]
gi|126716460|gb|EBA13324.1| TonB domain protein, putative [Roseobacter sp. CCS2]
Length = 368
Score = 92.9 bits (229), Expect = 5e-17, Method: Composition-based stats.
Identities = 30/165 (18%), Positives = 60/165 (36%), Gaps = 4/165 (2%)
Query: 110 LKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSS 169
L + P P + + A Q+ + E D +
Sbjct: 202 LASVRPIARPSRPTPPVETASAEQPAQEEPVAADPEPTQDDVAAALEAALSATPDAPAVA 261
Query: 170 RKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLG-KINVDVVGGT 228
+ R V WN+ ++ V++ F L+++G V G ++ + G
Sbjct: 262 AGPPMTGAERDSFRVAVNRCWNVDPGSV-AARVTVEVGFSLDREGRVQGNEVRLISSDGD 320
Query: 229 ELVRRMLRENARKAVIKSQA--FRLSPSTYKSWRNITLFFVPSKM 271
+ E AR+A+++ Q+ ++L Y W+++ + F PS M
Sbjct: 321 QAATNTAFEAARRAILRCQSGGYQLPADKYDQWQDVVITFDPSGM 365
>gi|89068041|ref|ZP_01155458.1| Possible TolA protein [Oceanicola granulosus HTCC2516]
gi|89046280|gb|EAR52337.1| Possible TolA protein [Oceanicola granulosus HTCC2516]
Length = 383
Score = 90.9 bits (224), Expect = 2e-16, Method: Composition-based stats.
Identities = 29/108 (26%), Positives = 43/108 (39%), Gaps = 8/108 (7%)
Query: 170 RKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKIN-VDVVGGT 228
+ S R V WN+ + ++ V + F L+ G V G + V G
Sbjct: 276 QGPPMSGAEQEGFRLAVRECWNVDAG-SEAARVVVTVGFGLSPAGRVEGDVRLVSASDGP 334
Query: 229 ELVRRMLRENARKAVIKSQ------AFRLSPSTYKSWRNITLFFVPSK 270
E R E AR+AV++ Q + L P Y SWR + + F P
Sbjct: 335 EGARSAAFEAARRAVLRCQNDNGRSGYDLPPEKYDSWREVEMTFDPRS 382
>gi|158422147|ref|YP_001523439.1| putative TolA protein [Azorhizobium caulinodans ORS 571]
gi|158329036|dbj|BAF86521.1| putative TolA protein [Azorhizobium caulinodans ORS 571]
Length = 341
Score = 90.2 bits (222), Expect = 3e-16, Method: Composition-based stats.
Identities = 20/102 (19%), Positives = 40/102 (39%), Gaps = 2/102 (1%)
Query: 172 RIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVD-VVGGTEL 230
+ +Q I +R R+ + W P+ LR + Q G + + + V +
Sbjct: 235 QTLTQSEIDALRARIQSCWGPPAGASEASDLRATIVVSFKQDGSLAMQPQLSGVTPASSP 294
Query: 231 VRRMLRENARKAVIKSQAFRLSPS-TYKSWRNITLFFVPSKM 271
++A +A+I+ + P+ Y W+ I + F M
Sbjct: 295 YGPAFADSALRAIIRCAPYTFLPANKYAVWKEIEMGFSLKDM 336
>gi|163796373|ref|ZP_02190334.1| Holliday junction DNA helicase B [alpha proteobacterium BAL199]
gi|159178515|gb|EDP63057.1| Holliday junction DNA helicase B [alpha proteobacterium BAL199]
Length = 409
Score = 87.5 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 28/147 (19%), Positives = 58/147 (39%), Gaps = 9/147 (6%)
Query: 128 ISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVI 187
+ K K +D ++ P ++ ++ R S + +R ++
Sbjct: 267 VLKTVQKMKDSASNPTQTTQN------APKTQDSTAQRSNFDSDRPLSVSEMDAIRQQIA 320
Query: 188 ANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVG-GTELVRRMLRENARKAVI-- 244
W +P+ K+ + L V++ ++N V +D T+ R E+A +A+
Sbjct: 321 RCWLVPAGAKQGESLLVEIRVRMNADRTVRDAEIIDSNRMRTDPFFRAAAESALRALRNP 380
Query: 245 KSQAFRLSPSTYKSWRNITLFFVPSKM 271
L P Y++W++ T+ F P M
Sbjct: 381 SCTPLNLPPEKYETWKSFTITFDPKDM 407
>gi|260467064|ref|ZP_05813244.1| TonB family protein [Mesorhizobium opportunistum WSM2075]
gi|259029173|gb|EEW30469.1| TonB family protein [Mesorhizobium opportunistum WSM2075]
Length = 385
Score = 86.7 bits (213), Expect = 3e-15, Method: Composition-based stats.
Identities = 35/186 (18%), Positives = 77/186 (41%), Gaps = 21/186 (11%)
Query: 90 KTHATENETKRSSSSK-GEQALKE-SALLRMPVSPYDKQKISKATNKEQDLQGISFAEKK 147
K + E+ ++ K ++ +KE S+ + ++ +IS +K++ G + K+
Sbjct: 214 KPQPAQAESAKAPDRKDADKPVKEASSKPKSDDKQFNADEISALLDKQKPSGGGA---KR 270
Query: 148 SIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMH 207
S + DK + + S+ + +++ W +P+ + + V +
Sbjct: 271 STQQASLGGDKDQ----------GQKLSKSEQGALESQLGGCWTLPAGLEGSESFVVVVR 320
Query: 208 FQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKS--QAFRLSPSTYKSWRNITLF 265
F L+ G + G+ +V+ G R E+A +AV K ++ W +I +
Sbjct: 321 FNLDNSGKLDGRPSVEKSSGN----RQFDESAVRAVQKCDVAGLQVPAGKQDIWNDIRVT 376
Query: 266 FVPSKM 271
F P +M
Sbjct: 377 FDPREM 382
>gi|126728385|ref|ZP_01744201.1| putative CheA signal transduction histidine kinases, no good domain
identification [Sagittula stellata E-37]
gi|126711350|gb|EBA10400.1| putative CheA signal transduction histidine kinases, no good domain
identification [Sagittula stellata E-37]
Length = 372
Score = 86.3 bits (212), Expect = 4e-15, Method: Composition-based stats.
Identities = 34/202 (16%), Positives = 72/202 (35%), Gaps = 19/202 (9%)
Query: 87 DQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQG---ISF 143
++T+ ET ++ E+ + + P + + A+N E +
Sbjct: 170 EETQESTAPPETTTEIVTEAEEPSGQPLAPSSSMRPRGRPEQV-ASNPEPAPETPAQQPP 228
Query: 144 AEKKSIDTVVVRPDKKELLSKVEKSS-----------RKRIPSQDAIAIVRNRVIANWNI 192
A + D+ + L+ + +R V A W +
Sbjct: 229 ASEPETDSAPANDPVADALAAAIAEELSGGGGAPDAPSGPPLTSGEREGLRIAVQACWIV 288
Query: 193 PSDFKRFKKLRVKMHFQLNQKGFVLGKI-NVDVVGGTELVRRMLRENARKAVIKSQA--F 249
+ ++V + F L+++G V G + + GG+ AR+A+++ Q +
Sbjct: 289 DVG-SQAADVKVTVGFDLDREGRVAGNVTMIGAEGGSGAAVDTAFGAARRAILRCQGDGY 347
Query: 250 RLSPSTYKSWRNITLFFVPSKM 271
+L P Y W+ + + F P M
Sbjct: 348 QLPPEKYDQWKRVEITFNPEDM 369
>gi|144897898|emb|CAM74762.1| TolA, tolA protein [Magnetospirillum gryphiswaldense MSR-1]
Length = 153
Score = 85.9 bits (211), Expect = 5e-15, Method: Composition-based stats.
Identities = 31/153 (20%), Positives = 58/153 (37%), Gaps = 11/153 (7%)
Query: 119 PVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDA 178
P D + KAT+K + AEK + K + + + + S
Sbjct: 8 SYHPLD--DLLKATDKAKP--NTPSAEKGN-------QPKPQNVRGSDMHNPNAPISMTE 56
Query: 179 IAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLREN 238
+ +R V WNIP+ K L +++ + G V ++ + + ++
Sbjct: 57 MDRIRKHVSDRWNIPAGAKDAANLIIEIRVSVQPDGTVTDAQIINAPLMADSFWQAAADS 116
Query: 239 ARKAVIKSQAFRLSPSTYKSWRNITLFFVPSKM 271
AR+AV + + Y +R+ L F P +M
Sbjct: 117 ARRAVRLASPLPIPRDKYDQFRDFVLTFNPKQM 149
>gi|13473331|ref|NP_104898.1| hypothetical protein mll3889 [Mesorhizobium loti MAFF303099]
gi|14024080|dbj|BAB50684.1| mll3889 [Mesorhizobium loti MAFF303099]
Length = 385
Score = 85.9 bits (211), Expect = 6e-15, Method: Composition-based stats.
Identities = 36/186 (19%), Positives = 76/186 (40%), Gaps = 21/186 (11%)
Query: 90 KTHATENETKRSSSSK-GEQALKE-SALLRMPVSPYDKQKISKATNKEQDLQGISFAEKK 147
K + E+ ++ K E+ +KE S+ + ++ +IS +K++ G + K+
Sbjct: 214 KPQPAQAESAKAPERKDAEKPVKEASSKPKSDDKQFNANEISALLDKQKPSGGGA---KR 270
Query: 148 SIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMH 207
S + DK + + S+ + +++ W +P + + V +
Sbjct: 271 STQQASLGGDKDQ----------GQKLSKSEQGALESQLGGCWTLPVGLEGSENFVVVVR 320
Query: 208 FQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKS--QAFRLSPSTYKSWRNITLF 265
F L+ G + G+ +V+ G R E+A +AV K ++ W +I +
Sbjct: 321 FNLDNSGKLDGRPSVEKSSGN----RQFDESAVRAVQKCDVAGLQVPAGKQDIWNDIRVT 376
Query: 266 FVPSKM 271
F P +M
Sbjct: 377 FDPREM 382
>gi|221640125|ref|YP_002526387.1| TolA protein [Rhodobacter sphaeroides KD131]
gi|221160906|gb|ACM01886.1| TolA protein [Rhodobacter sphaeroides KD131]
Length = 414
Score = 85.6 bits (210), Expect = 6e-15, Method: Composition-based stats.
Identities = 39/167 (23%), Positives = 58/167 (34%), Gaps = 11/167 (6%)
Query: 113 SALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEK----S 168
S+ P DK K K + ++ SID + EK +
Sbjct: 248 SSRTETAEKPADKPAE-KPAEKPAAQK--PRKDEASIDAALAEAMGGGEEPAAEKPASPA 304
Query: 169 SRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKI--NVDVVG 226
+ R V WN+ + V + L+Q G ++ G
Sbjct: 305 RSGPPVTSGEKDAFRVAVQQCWNVGALSSDALSTTVTVAMSLSQDGKPDAGSIRMIESSG 364
Query: 227 GTELVRRMLRENARKAVIKSQA--FRLSPSTYKSWRNITLFFVPSKM 271
GT+ R E AR+A+I+ A F L P Y WR + + F PS M
Sbjct: 365 GTDAGARQAFEAARRAIIRCGARGFPLPPEKYDQWREVEMVFDPSGM 411
>gi|126463083|ref|YP_001044197.1| hypothetical protein Rsph17029_2323 [Rhodobacter sphaeroides ATCC
17029]
gi|126104747|gb|ABN77425.1| hypothetical protein Rsph17029_2323 [Rhodobacter sphaeroides ATCC
17029]
Length = 414
Score = 85.6 bits (210), Expect = 7e-15, Method: Composition-based stats.
Identities = 39/167 (23%), Positives = 58/167 (34%), Gaps = 11/167 (6%)
Query: 113 SALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEK----S 168
S+ P DK K K + ++ SID + EK +
Sbjct: 248 SSRTETAEKPADKPAE-KPAEKPAAQK--PRKDEASIDAALAEAMGGGEEPAAEKPASPA 304
Query: 169 SRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKI--NVDVVG 226
+ R V WN+ + V + L+Q G ++ G
Sbjct: 305 RSGPPVTSGEKDAFRVAVQQCWNVGALSSDALSTTVTVAMSLSQDGKPDAGSIRMIESSG 364
Query: 227 GTELVRRMLRENARKAVIKSQA--FRLSPSTYKSWRNITLFFVPSKM 271
GT+ R E AR+A+I+ A F L P Y WR + + F PS M
Sbjct: 365 GTDAGARQAFEAARRAIIRCGARGFPLPPEKYDQWREVEMVFDPSGM 411
>gi|71083301|ref|YP_266020.1| TolA protein [Candidatus Pelagibacter ubique HTCC1062]
gi|91762269|ref|ZP_01264234.1| TolA protein [Candidatus Pelagibacter ubique HTCC1002]
gi|71062414|gb|AAZ21417.1| TolA protein [Candidatus Pelagibacter ubique HTCC1062]
gi|91718071|gb|EAS84721.1| TolA protein [Candidatus Pelagibacter ubique HTCC1002]
Length = 269
Score = 85.6 bits (210), Expect = 8e-15, Method: Composition-based stats.
Identities = 29/152 (19%), Positives = 64/152 (42%), Gaps = 7/152 (4%)
Query: 126 QKISKATNKE-QDLQGISFAEKKS-IDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVR 183
++IS+ KE D I+ KS ++ ++ +K + ++
Sbjct: 116 KQISEFEKKELFDTNSIAALIDKSKTESAETNKKSNKVTQDQDKDMDFSGLTLSEEDALK 175
Query: 184 NRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINV----DVVGGTELVRRMLRENA 239
++ W+IP + L V++ QL G ++ K + + + ++L E+A
Sbjct: 176 AQIFGCWSIPLGLPFNEDLLVRIKLQLKPDGSII-KTEILDHARMNRPGQGFYKVLAESA 234
Query: 240 RKAVIKSQAFRLSPSTYKSWRNITLFFVPSKM 271
+A+ Q R+ + Y+ W+++ L F +M
Sbjct: 235 LRAIKLCQPLRVPSTGYERWKDMQLNFDAREM 266
>gi|319781026|ref|YP_004140502.1| TonB family protein [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317166914|gb|ADV10452.1| TonB family protein [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 385
Score = 85.2 bits (209), Expect = 9e-15, Method: Composition-based stats.
Identities = 20/106 (18%), Positives = 44/106 (41%), Gaps = 6/106 (5%)
Query: 168 SSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGG 227
+ + S+ + + +++ W +P + + V + F L+ G + G+ V+ G
Sbjct: 281 KDQGQKLSRSEMGALESQLGGCWTLPVGLEGSENFLVVVRFNLDASGKLDGRPAVEKSSG 340
Query: 228 TELVRRMLRENARKAVIKS--QAFRLSPSTYKSWRNITLFFVPSKM 271
R E+A +AV K ++ W ++ + F P +M
Sbjct: 341 N----RQFDESAVRAVQKCDVTGLQVPAGKQDIWADVRVTFDPREM 382
>gi|115526696|ref|YP_783607.1| putative TolA [Rhodopseudomonas palustris BisA53]
gi|115520643|gb|ABJ08627.1| putative TolA [Rhodopseudomonas palustris BisA53]
Length = 314
Score = 84.8 bits (208), Expect = 1e-14, Method: Composition-based stats.
Identities = 22/101 (21%), Positives = 49/101 (48%), Gaps = 2/101 (1%)
Query: 172 RIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELV 231
+ SQ + +R R+ WN+ + +R ++L V + +L + + + V G+
Sbjct: 212 QTLSQSELDALRARLTQLWNVQAGTERPEELIVDIRIRLTPERRLAAPPEI-VSRGSSPR 270
Query: 232 RRMLRENARKAVIKSQAFRLS-PSTYKSWRNITLFFVPSKM 271
+ + A +AV++ Q + + TY W+++ + F P +M
Sbjct: 271 YQAAADAAMRAVLQGQPYEMLRAETYDQWKDMIVTFDPRQM 311
>gi|260431109|ref|ZP_05785080.1| possible TolA protein [Silicibacter lacuscaerulensis ITI-1157]
gi|260414937|gb|EEX08196.1| possible TolA protein [Silicibacter lacuscaerulensis ITI-1157]
Length = 365
Score = 84.8 bits (208), Expect = 1e-14, Method: Composition-based stats.
Identities = 25/98 (25%), Positives = 46/98 (46%), Gaps = 4/98 (4%)
Query: 178 AIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVL-GKIN-VDVVGGTELVRRML 235
+R V WN+ S + V + F LN+ G ++ G + +D GG+ +
Sbjct: 265 EKDAMRLAVSRCWNVGSLSTDALQTVVVVGFSLNRDGTIVPGSLRMLDSSGGSAGAAKQA 324
Query: 236 RENARKAVIKSQA--FRLSPSTYKSWRNITLFFVPSKM 271
+ AR+A+++ A + L Y W++I + F P +M
Sbjct: 325 FDAARRAILRCGAKGYDLPADKYAHWKDIEITFNPERM 362
>gi|254456093|ref|ZP_05069522.1| TolA protein [Candidatus Pelagibacter sp. HTCC7211]
gi|207083095|gb|EDZ60521.1| TolA protein [Candidatus Pelagibacter sp. HTCC7211]
Length = 292
Score = 83.6 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 26/156 (16%), Positives = 63/156 (40%), Gaps = 11/156 (7%)
Query: 120 VSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAI 179
VS ++K+ + +N + +K I+ ++ +++ +
Sbjct: 141 VSEFEKKDLFDPSNIA------ALIDKSKIEETDNIKKNNDITQDQDRNIESNKLTLSEE 194
Query: 180 AIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINV----DVVGGTELVRRML 235
++ ++ W++P + L V++ +L G V K + + + ++L
Sbjct: 195 DALKAQIFGCWSVPLGLPYNEDLLVRIKLKLEPDGSV-AKTEILDHARMNKPGQGFYKVL 253
Query: 236 RENARKAVIKSQAFRLSPSTYKSWRNITLFFVPSKM 271
E+A +AV Q R+ + Y+ W+ + L F +M
Sbjct: 254 AESALRAVKLCQPLRVPNTGYERWKELQLNFDAREM 289
>gi|300023931|ref|YP_003756542.1| protein TolA [Hyphomicrobium denitrificans ATCC 51888]
gi|299525752|gb|ADJ24221.1| protein TolA [Hyphomicrobium denitrificans ATCC 51888]
Length = 384
Score = 83.6 bits (205), Expect = 3e-14, Method: Composition-based stats.
Identities = 22/109 (20%), Positives = 46/109 (42%), Gaps = 7/109 (6%)
Query: 168 SSRKRIPSQDAIAIVRN----RVIANWNIPSDFKRFKKL-RVKMHFQLNQKGFVLGKINV 222
+ + S +++ ++ W P +++ V++H+++N G + G+ V
Sbjct: 277 TGTDTVLSLREQDMLKGMIKSQLNGCWR-PPGTGGGEEVPVVELHWEMNPDGSLSGEPRV 335
Query: 223 DVVGGTELVRRMLRENARKAVIKSQAFRLSPSTYKSWRNITLFFVPSKM 271
++ E A +AV FRL P Y +W+ + F P +M
Sbjct: 336 T-SAPPTTAGQVYTEAALRAVRMCAPFRLPPDKYNAWKIVDWTFDPRQM 383
>gi|90426223|ref|YP_534593.1| putative TolA [Rhodopseudomonas palustris BisB18]
gi|90108237|gb|ABD90274.1| putative TolA [Rhodopseudomonas palustris BisB18]
Length = 314
Score = 83.6 bits (205), Expect = 3e-14, Method: Composition-based stats.
Identities = 22/100 (22%), Positives = 48/100 (48%), Gaps = 2/100 (2%)
Query: 173 IPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVR 232
SQ + +R R+ WN+ + +R ++L V + +L + + + V G+
Sbjct: 213 TLSQSELDALRARLTQLWNVQAGTERPEELIVDIRIRLTPERRLAAPPEI-VSRGSSPRY 271
Query: 233 RMLRENARKAVIKSQAFRLS-PSTYKSWRNITLFFVPSKM 271
+ + A +AV++ Q + + TY W+++ + F P +M
Sbjct: 272 QAAADAAMRAVLQGQPYDMLQAGTYDQWKDMIVTFDPRQM 311
>gi|332559130|ref|ZP_08413452.1| TolA protein [Rhodobacter sphaeroides WS8N]
gi|332276842|gb|EGJ22157.1| TolA protein [Rhodobacter sphaeroides WS8N]
Length = 414
Score = 82.9 bits (203), Expect = 4e-14, Method: Composition-based stats.
Identities = 38/167 (22%), Positives = 58/167 (34%), Gaps = 11/167 (6%)
Query: 113 SALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSR-- 170
S+ P DK K K + ++ SID + EK +
Sbjct: 248 SSRTETAEKPADKPAE-KPAEKPAAQK--PRKDEASIDAALAEAMGGGEEPAAEKPASPA 304
Query: 171 --KRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKI--NVDVVG 226
+ D R V WN+ + V + + Q G ++ G
Sbjct: 305 RLGTAVTGDEKDKFRFAVQQCWNVGALSSDAMSTTVTVAMSMRQDGTPEAGSIRMIEASG 364
Query: 227 GTELVRRMLRENARKAVIKSQA--FRLSPSTYKSWRNITLFFVPSKM 271
GT+ R E AR+A+I+ A F L P Y WR + + F P+ M
Sbjct: 365 GTDAGARQAFEAARRAIIRCGARGFPLPPEKYDQWREVEMVFDPNGM 411
>gi|254510110|ref|ZP_05122177.1| possible TolA protein [Rhodobacteraceae bacterium KLH11]
gi|221533821|gb|EEE36809.1| possible TolA protein [Rhodobacteraceae bacterium KLH11]
Length = 365
Score = 82.5 bits (202), Expect = 5e-14, Method: Composition-based stats.
Identities = 28/109 (25%), Positives = 44/109 (40%), Gaps = 4/109 (3%)
Query: 167 KSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKI--NVDV 224
+ +R V WN+ S + V + F L G V+G +D
Sbjct: 254 TEPSGPPLTSGEKDAMRVAVSRCWNVGSLSTDALQTVVVVGFSLTPDGKVVGGSLRMLDS 313
Query: 225 VGGTELVRRMLRENARKAVIKSQA--FRLSPSTYKSWRNITLFFVPSKM 271
GGT + E AR+AV++ A + L Y W++I + F P +M
Sbjct: 314 SGGTSASAKQAYEAARRAVLRCGAKGYDLPADKYSQWQDIEITFNPERM 362
>gi|126737226|ref|ZP_01752961.1| tonB domain protein, putative [Roseobacter sp. SK209-2-6]
gi|126721811|gb|EBA18514.1| tonB domain protein, putative [Roseobacter sp. SK209-2-6]
Length = 381
Score = 81.3 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 41/196 (20%), Positives = 71/196 (36%), Gaps = 16/196 (8%)
Query: 86 SDQTKTHATENETKRSSS----SKGEQALKESALLRMPVSPYDKQKISKATNKEQD--LQ 139
SD+ T A E+E S +L+ R P +P ++++ + +
Sbjct: 189 SDRIVTEANEDEEAELEPAPVVSAPSTSLRPQVRPRRPQAPEQPTEVAEPLDDAESEAQD 248
Query: 140 GISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRF 199
S E + + + + +R V WN+ S
Sbjct: 249 QASAIEDALAAAIAGGGEVEAPEP------SGPPLTSGEKDALRVAVSKCWNVGSLSSDA 302
Query: 200 KKLRVKMHFQLNQKGFVL-GKIN-VDVVGGTELVRRMLRENARKAVIKSQA--FRLSPST 255
+ V++ L+Q G G I + GG+ + E AR+A+I+ A F+L
Sbjct: 303 LRTTVEVSVTLSQDGKPDPGSIRMISSTGGSNSAAKQAYEAARRAIIRCGARGFQLPAEK 362
Query: 256 YKSWRNITLFFVPSKM 271
Y WR + + F P KM
Sbjct: 363 YSQWREVVMTFNPEKM 378
>gi|262277491|ref|ZP_06055284.1| TolA protein [alpha proteobacterium HIMB114]
gi|262224594|gb|EEY75053.1| TolA protein [alpha proteobacterium HIMB114]
Length = 270
Score = 80.9 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 31/189 (16%), Positives = 75/189 (39%), Gaps = 26/189 (13%)
Query: 86 SDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAE 145
+D+ ++E ++SS + ++ +D KI+ +K + + +
Sbjct: 102 TDKQNPEEVKDEIRQSSEFEKKEL-------------FDPNKIAALIDK--SKEETADIQ 146
Query: 146 KKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVK 205
+K + D L K + ++ ++ WNIP + L V+
Sbjct: 147 QKQSLEITQDQDSTVSLDK--------GLTITQEDAIKAQIFKCWNIPLGLPYDEDLTVR 198
Query: 206 MHFQLNQKGFVLGKI---NVDVVGGTELVRRMLRENARKAVIKSQAFRLSPSTYKSWRNI 262
+ +LN+ G ++ +V + + ++L E+A +AV ++ + + W+++
Sbjct: 199 VRLKLNKDGSIMSSEILDHVRMNRPGQGFYKVLAESALRAVRLCNPLKMPATGHDKWKDL 258
Query: 263 TLFFVPSKM 271
L F +M
Sbjct: 259 QLNFDAKEM 267
>gi|114570967|ref|YP_757647.1| putative TolA [Maricaulis maris MCS10]
gi|114341429|gb|ABI66709.1| Cell division and transport-associated protein TolA [Maricaulis
maris MCS10]
Length = 271
Score = 80.2 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 22/92 (23%), Positives = 40/92 (43%), Gaps = 4/92 (4%)
Query: 182 VRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVD----VVGGTELVRRMLRE 237
+R+ + W D +L V++ L++ G + G + ++ R+ E
Sbjct: 176 IRSHLSRCWRASLDAPEPNELAVQLVLNLDRSGELTGPPRLTDQARILNSPNPYLRVAGE 235
Query: 238 NARKAVIKSQAFRLSPSTYKSWRNITLFFVPS 269
A +A ++ Q + L P Y WR I + F PS
Sbjct: 236 RALRAAVQCQPYPLPPEAYSEWRQIEVNFSPS 267
>gi|86139147|ref|ZP_01057717.1| tonB domain protein, putative [Roseobacter sp. MED193]
gi|85823991|gb|EAQ44196.1| tonB domain protein, putative [Roseobacter sp. MED193]
Length = 375
Score = 79.8 bits (195), Expect = 4e-13, Method: Composition-based stats.
Identities = 34/160 (21%), Positives = 51/160 (31%), Gaps = 4/160 (2%)
Query: 116 LRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPS 175
V P + + + E+ S + +
Sbjct: 213 PVTSVRPKPRPSRPAPSAVAETPPSTPQTEQASAIEDALAAAIGGGGEVAAPEPSGPPLT 272
Query: 176 QDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGF-VLGKIN-VDVVGGTELVRR 233
+R V WN+ S K V++ L G G I V GG+ +
Sbjct: 273 VGEKDALRVSVSKCWNVGSLSTEALKTTVEVSVSLEADGRPKNGSIRMVSSTGGSAGAAK 332
Query: 234 MLRENARKAVIKSQA--FRLSPSTYKSWRNITLFFVPSKM 271
E AR+A+I+ A F L Y WR+I + F P KM
Sbjct: 333 QAYEAARRAIIRCGAKGFSLPSEKYDHWRDIVMTFNPEKM 372
>gi|77464241|ref|YP_353745.1| hypothetical protein RSP_0670 [Rhodobacter sphaeroides 2.4.1]
gi|77388659|gb|ABA79844.1| Possible TolA protein [Rhodobacter sphaeroides 2.4.1]
Length = 415
Score = 79.4 bits (194), Expect = 5e-13, Method: Composition-based stats.
Identities = 37/168 (22%), Positives = 55/168 (32%), Gaps = 12/168 (7%)
Query: 113 SALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEK----S 168
S+ P DK K K + ++ SID + EK +
Sbjct: 248 SSRTETAEKPADKPAE-KPAEKPAAQK--PRKDEASIDAALAEAMGGGEEPAAEKPASPA 304
Query: 169 SRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKI--NVDVVG 226
+ R V WN+ + V + L+Q G ++ G
Sbjct: 305 RSGPPVTSGEKDAFRVAVQQCWNVGALSSDALSTTVTVAMSLSQDGKPDAGSIRMIESSG 364
Query: 227 GTELVRRMLRENARKAVIKSQAFRLS---PSTYKSWRNITLFFVPSKM 271
GT+ R E AR+A+I A P Y WR + + F PS M
Sbjct: 365 GTDAGARQAFEAARRAIILCGALGFPLPXPEKYDQWREVEMVFDPSGM 412
>gi|148555049|ref|YP_001262631.1| hypothetical protein Swit_2134 [Sphingomonas wittichii RW1]
gi|148500239|gb|ABQ68493.1| hypothetical protein Swit_2134 [Sphingomonas wittichii RW1]
Length = 270
Score = 77.8 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 17/92 (18%), Positives = 42/92 (45%), Gaps = 4/92 (4%)
Query: 184 NRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVD----VVGGTELVRRMLRENA 239
++V + IP+ + ++ +L + G + V V + R + E A
Sbjct: 178 SQVKPCYTIPAGGTDTTSIISRIRLRLKKDGSIAAAPEVIGNLGVTPANQPYVRQMNEAA 237
Query: 240 RKAVIKSQAFRLSPSTYKSWRNITLFFVPSKM 271
+A+ + ++L P +++W+++ F P++M
Sbjct: 238 TRALQRCAPYKLPPDLFEAWQDLIFTFRPAQM 269
>gi|159043659|ref|YP_001532453.1| hypothetical protein Dshi_1110 [Dinoroseobacter shibae DFL 12]
gi|157911419|gb|ABV92852.1| conserved hypothetical protein [Dinoroseobacter shibae DFL 12]
Length = 351
Score = 77.8 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 25/102 (24%), Positives = 42/102 (41%), Gaps = 4/102 (3%)
Query: 174 PSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGF--VLGKINVDVVGGTELV 231
+ +R V WN+ S + V + ++ Q G + + GG++
Sbjct: 247 LTASERDGLRVAVQQCWNVGSLSSDALRTTVTVAVEMEQSGRPVINSIRMIGSEGGSDAA 306
Query: 232 RRMLRENARKAVIKS--QAFRLSPSTYKSWRNITLFFVPSKM 271
R E AR+A+I+ F L Y WR+I + F P +M
Sbjct: 307 ARQAFETARRAIIRCGSAGFDLPVEKYAQWRDIEMTFNPERM 348
>gi|114765732|ref|ZP_01444830.1| Possible TolA protein [Pelagibaca bermudensis HTCC2601]
gi|114541949|gb|EAU44984.1| Possible TolA protein [Roseovarius sp. HTCC2601]
Length = 379
Score = 77.5 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 19/113 (16%), Positives = 40/113 (35%), Gaps = 5/113 (4%)
Query: 163 SKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKIN- 221
+ ++ +R V W + + V + ++ G V+
Sbjct: 265 PTQSDTPAGPPLTRGEQDALRIAVQRCWIVDVG-SEAASVTVTVGMEMEPSGRVVSSSLR 323
Query: 222 -VDVVGGTELVRRMLRENARKAVIKSQA--FRLSPSTYKSWRNITLFFVPSKM 271
+ GG+ + AR+A+++ Q ++L Y W+ I + F P M
Sbjct: 324 LIGSEGGSASAADTAFQAARRAILRCQGDGYQLPQDKYDQWKQIEMTFNPDDM 376
>gi|209965096|ref|YP_002298011.1| protein TonB, putative [Rhodospirillum centenum SW]
gi|209958562|gb|ACI99198.1| protein TonB, putative [Rhodospirillum centenum SW]
Length = 330
Score = 77.5 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 21/120 (17%), Positives = 47/120 (39%), Gaps = 3/120 (2%)
Query: 155 RPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKG 214
+P ++ + S ++ S +R ++ WN+PS + + ++ ++ +
Sbjct: 210 KPQERPVESGSPPAAAGERLSISEEDALRRQIGQCWNVPSGARGVESMQAEIRVLFDANM 269
Query: 215 FVLGKINVDVVGG-TELVRRMLRENARKA--VIKSQAFRLSPSTYKSWRNITLFFVPSKM 271
V G + G ++ R E+A +A + L Y + +I + F P M
Sbjct: 270 RVTGVQFIRGNGNLSDPHFRAFVESALRAPQLPACATLNLPRDKYGNRGSIVMNFSPRDM 329
>gi|146276613|ref|YP_001166772.1| hypothetical protein Rsph17025_0561 [Rhodobacter sphaeroides ATCC
17025]
gi|145554854|gb|ABP69467.1| hypothetical protein Rsph17025_0561 [Rhodobacter sphaeroides ATCC
17025]
Length = 416
Score = 77.1 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 26/106 (24%), Positives = 40/106 (37%), Gaps = 4/106 (3%)
Query: 170 RKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKI--NVDVVGG 227
+ R V WN+ + V + + Q G ++ GG
Sbjct: 308 SGPPVTSGEKDAFRIAVQQCWNVGALSTEALATTVTVAMTMAQDGKPDAGSIRMIESRGG 367
Query: 228 TELVRRMLRENARKAVIKSQA--FRLSPSTYKSWRNITLFFVPSKM 271
T+ R E AR+A+I+ A F L P Y WR + + F P+ M
Sbjct: 368 TDAGARQAFEAARRAIIRCGARGFPLPPEKYDQWREVEMEFDPNGM 413
>gi|83312311|ref|YP_422575.1| periplasmic protein TonB, links inner and outer membranes
[Magnetospirillum magneticum AMB-1]
gi|82947152|dbj|BAE52016.1| Periplasmic protein TonB, links inner and outer membranes
[Magnetospirillum magneticum AMB-1]
Length = 313
Score = 76.3 bits (186), Expect = 4e-12, Method: Composition-based stats.
Identities = 30/154 (19%), Positives = 59/154 (38%), Gaps = 9/154 (5%)
Query: 120 VSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIP----S 175
+ DK+K + ++ L+ +K +V + + + S P S
Sbjct: 158 LKSVDKKKPTPKDELDKLLKST----EKLKPSVPENKTATQTAPQSVRGSASHNPNEPVS 213
Query: 176 QDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVL-GKINVDVVGGTELVRRM 234
+R + WN+P+ K KL V + + G V ++ ++ V +
Sbjct: 214 MTERDRIRAHIERFWNVPAGAKDADKLVVMIKVSVLPDGTVTAAEVELNPVMMMNPYYQA 273
Query: 235 LRENARKAVIKSQAFRLSPSTYKSWRNITLFFVP 268
++AR+AV + + Y +R+ TL F P
Sbjct: 274 AADSARRAVRAASPLPIPVDKYDQFRDFTLAFNP 307
>gi|260576646|ref|ZP_05844633.1| TonB domain-containing protein [Rhodobacter sp. SW2]
gi|259021131|gb|EEW24440.1| TonB domain-containing protein [Rhodobacter sp. SW2]
Length = 385
Score = 75.5 bits (184), Expect = 8e-12, Method: Composition-based stats.
Identities = 21/106 (19%), Positives = 40/106 (37%), Gaps = 4/106 (3%)
Query: 166 EKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKI--NVD 223
+ S +R V WN+ + + V + + G +
Sbjct: 274 NTAPAGPPMSSGEKDALRVAVERCWNVAALSTEALRTTVTVAVSVGPDGTPEAASVRMIG 333
Query: 224 VVGGTELVRRMLRENARKAVIKSQA--FRLSPSTYKSWRNITLFFV 267
GG++ R E AR+A+++ + F L P Y +W+++ L F
Sbjct: 334 SSGGSDAAARQAYEVARRAILRCGSEGFPLPPEKYDTWKDLELVFN 379
>gi|84687706|ref|ZP_01015579.1| tonB domain protein, putative [Maritimibacter alkaliphilus
HTCC2654]
gi|84664289|gb|EAQ10780.1| tonB domain protein, putative [Rhodobacterales bacterium HTCC2654]
Length = 360
Score = 74.8 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 27/100 (27%), Positives = 40/100 (40%), Gaps = 2/100 (2%)
Query: 174 PSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRR 233
+ +R V WN+ S K V + Q+ G G V G T+ +
Sbjct: 258 LTSGERDGLRLAVSQCWNLGSSSTDAMKTTVVVLVQMQPNGVPSGIELVSSEGPTQDAVQ 317
Query: 234 MLRENARKAVIKSQA--FRLSPSTYKSWRNITLFFVPSKM 271
+ AR+AVI+ A + L Y+ WR I + F P M
Sbjct: 318 TAFQAARRAVIRCGANGYNLPSEKYEQWREIEMTFNPENM 357
>gi|154246986|ref|YP_001417944.1| putative TolA [Xanthobacter autotrophicus Py2]
gi|154161071|gb|ABS68287.1| putative TolA [Xanthobacter autotrophicus Py2]
Length = 317
Score = 74.8 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 32/190 (16%), Positives = 70/190 (36%), Gaps = 18/190 (9%)
Query: 84 RFSDQTKTHATENETKRSSSSKGEQALKESALL---RMPVSPYDKQKISKATNKEQDLQG 140
+ +Q K A + KE S ++ +I + +K +
Sbjct: 134 KKQEQPKDEAKTEAAAAPLPPRKPAPPKEQPKPVEANAAPSEFNTDQIKQLLDKRAPSRQ 193
Query: 141 ISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFK 200
++ AE+ S + + P + + + I R RV+ W+ +
Sbjct: 194 VASAEQVSTTSSLGSPRGE-----------GQQLTASEIDAFRRRVMECWSTDGGNLD-R 241
Query: 201 KLRVKMHFQLNQKGFVLGKINVD--VVGGTELVRRMLRENARKAVIKSQAFRL-SPSTYK 257
+RV ++ LN+ G V G ++ G + + N +A++ Q +++ P TY
Sbjct: 242 NIRVDVNIYLNKDGTVAGTPQIEPGQSGSGQPAFQAYAMNGIRAIMACQPYKMFRPETYA 301
Query: 258 SWRNITLFFV 267
+W+ + +
Sbjct: 302 NWKTLPITLN 311
>gi|260429033|ref|ZP_05783010.1| possible TolA protein [Citreicella sp. SE45]
gi|260419656|gb|EEX12909.1| possible TolA protein [Citreicella sp. SE45]
Length = 397
Score = 74.0 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 29/188 (15%), Positives = 62/188 (32%), Gaps = 5/188 (2%)
Query: 88 QTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKK 147
+T + +++ R + + A + P P +Q S++T + +
Sbjct: 208 ETPAASAPSQSVRPRTRPSDIASRSEPEPETPARPEPEQPASESTASTPAAEPEPADDAV 267
Query: 148 SIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMH 207
+ S + ++ +R V W + + V +
Sbjct: 268 ADAIAEALAAGGGGGSTSSDAPSGPPLTRGEQDALRLAVQRCWIVDVG-SEAANVTVTVS 326
Query: 208 FQLNQKGFVLGKIN--VDVVGGTELVRRMLRENARKAVIKSQA--FRLSPSTYKSWRNIT 263
+ G V+ V GG+ + AR+A+++ Q + L Y+ W+ I
Sbjct: 327 MDMEPSGQVVSSSLKLVGSSGGSSSAADTAFQAARRAILRCQGAGYELPQDKYQQWKRIE 386
Query: 264 LFFVPSKM 271
+ F P M
Sbjct: 387 MTFNPDDM 394
>gi|126725524|ref|ZP_01741366.1| tonB domain protein, putative [Rhodobacterales bacterium HTCC2150]
gi|126704728|gb|EBA03819.1| tonB domain protein, putative [Rhodobacterales bacterium HTCC2150]
Length = 377
Score = 73.6 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 30/170 (17%), Positives = 62/170 (36%), Gaps = 17/170 (10%)
Query: 112 ESALLRMPVSPYDKQKISKATNKEQDLQGISFA--EKKSIDTVVVRPDKKELLSKVEKSS 169
++A +R + P + K ++A + + ++ + PD +
Sbjct: 212 KTAPVR-SIRPKSRPKRAEAVAEVDPKPETPAVDPLQAALSEALSEPDTQADTPA--PVP 268
Query: 170 RKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKIN------VD 223
+ ++ V WN+ S ++ V + F + + + V
Sbjct: 269 SGPPLTGSEKEGLKVSVSNCWNVGSLSTDALQVTVTIGFSVKRDT----RPENGSIYLVS 324
Query: 224 VVGGTELVRRMLRENARKAVIKSQA--FRLSPSTYKSWRNITLFFVPSKM 271
GG+E E R+A+I+ + F L Y+ WR+I + F P +M
Sbjct: 325 ATGGSESSINKAYEAGRRAIIRCGSKGFPLPDDKYEQWRDIEITFNPERM 374
>gi|254465856|ref|ZP_05079267.1| TolA family protein [Rhodobacterales bacterium Y4I]
gi|206686764|gb|EDZ47246.1| TolA family protein [Rhodobacterales bacterium Y4I]
Length = 373
Score = 73.6 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 44/228 (19%), Positives = 80/228 (35%), Gaps = 19/228 (8%)
Query: 59 EPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKE--SALL 116
+ +VQ + + E + VQE R + + ENE + ++S K +
Sbjct: 147 DDIVQPEVAPDEGAKTEQEVQEATAREAASDRIVTEENEGEDIAASAAPAVSKRPVTRPS 206
Query: 117 RMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKV-----EKSSRK 171
R P + ++++A + + E + T D +
Sbjct: 207 RPKPQPEPETQVTEAAQPAKPKEPEEPEEPEPSGTSSAVADALAEALAGGADVEDPEPSG 266
Query: 172 RIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKIN------VDVV 225
+ +R V WN+ S K V + L Q G + + +
Sbjct: 267 PPLTLGEKDALRVAVSQCWNVGSLSTDALKTTVVVAVSLAQDG----RPDSGSIRMLSST 322
Query: 226 GGTELVRRMLRENARKAVIKSQA--FRLSPSTYKSWRNITLFFVPSKM 271
GG + + AR+A+I+ A F+L Y WR+I + F P +M
Sbjct: 323 GGASSAAQQAFDAARRAIIRCGAGGFQLPAEKYAQWRDIEMTFNPERM 370
>gi|330814395|ref|YP_004358634.1| TolA protein [Candidatus Pelagibacter sp. IMCC9063]
gi|327487490|gb|AEA81895.1| TolA protein [Candidatus Pelagibacter sp. IMCC9063]
Length = 273
Score = 73.6 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 35/180 (19%), Positives = 64/180 (35%), Gaps = 22/180 (12%)
Query: 95 ENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVV 154
E K E KE + DK K + + +KK +
Sbjct: 110 PKEVKELIRQSSEFEKKELFDPNKIAALIDKSK-----------EETADIQKKQSLELTQ 158
Query: 155 RPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKG 214
D L+K SQ ++ ++ WNIP + L V++ L + G
Sbjct: 159 NQDNSVTLNK------GITLSQQ--DAIKAQIYKCWNIPLGLPFDQNLLVRIKLVLKEDG 210
Query: 215 FVLGKINVD---VVGGTELVRRMLRENARKAVIKSQAFRLSPSTYKSWRNITLFFVPSKM 271
+L +D + + ++L E+A +AV ++ + Y W+++ L F +M
Sbjct: 211 SILSSEVLDHRRMNQPGQAYYKVLAESALRAVKLCDPLKMPTTGYNKWKDLQLNFDAKEM 270
>gi|254477283|ref|ZP_05090669.1| possible TolA protein [Ruegeria sp. R11]
gi|214031526|gb|EEB72361.1| possible TolA protein [Ruegeria sp. R11]
Length = 388
Score = 73.2 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 36/200 (18%), Positives = 67/200 (33%), Gaps = 19/200 (9%)
Query: 87 DQTKTHATENETKRSSSSKGEQALKESALLRMPV-------SPYDKQKISKATNKEQDLQ 139
D+ T TE +T + +S+ E++L+ A P P + ++ +
Sbjct: 190 DRIVTEETEADTDQVASAAPERSLRPQARPNRPAPTPEPEPDPAPQTTAAREPEPAAPSE 249
Query: 140 GISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRF 199
++ + + V + +R V WN+ S
Sbjct: 250 PEPREDRAAAVEDALAAALAGGGDVVAPEPSGPPLTSGEREALRLVVQNCWNVGSLSSEA 309
Query: 200 KKLRVKMHFQLNQKGFVLGKIN------VDVVGGTELVRRMLRENARKAVIKSQA--FRL 251
+ V + L G + + GG+ AR+A+++ A F+L
Sbjct: 310 LRTTVVVALSLTPDG----RPEEGSIRLLSSTGGSGAAANQAFGAARRAILRCGARGFQL 365
Query: 252 SPSTYKSWRNITLFFVPSKM 271
Y WRNI + F P +M
Sbjct: 366 PSDKYAQWRNIEMTFNPERM 385
>gi|56697942|ref|YP_168313.1| TonB domain-containing protein [Ruegeria pomeroyi DSS-3]
gi|56679679|gb|AAV96345.1| tonB domain protein, putative [Ruegeria pomeroyi DSS-3]
Length = 380
Score = 73.2 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 33/188 (17%), Positives = 68/188 (36%), Gaps = 7/188 (3%)
Query: 91 THATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGI---SFAEKK 147
T E ET + ++ + + P + + +K K + + +
Sbjct: 190 TDRIEPETDPQADVAPSRSPRPKTRPQQPTQTAETKPEAKPEAKPEAKPATGGQTDDSRN 249
Query: 148 SIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMH 207
+++ + + + + +R V WN+ S + V +
Sbjct: 250 AVNEALAQALAASEEPAAAPAPSGPPLTSGEKESLRVAVSQCWNVGSLSSEALRTTVVVS 309
Query: 208 FQLNQKGFV-LGKINVD-VVGGTELVRRMLRENARKAVIKSQA--FRLSPSTYKSWRNIT 263
++N G +G I + GG+ + E AR+A+I+ A + L Y WR+I
Sbjct: 310 VRMNADGTPDIGSIRLTDSSGGSTGAAKQAYEAARRAIIRCGAKGYNLPSEKYDHWRDIE 369
Query: 264 LFFVPSKM 271
+ F P +M
Sbjct: 370 MTFNPERM 377
>gi|163738348|ref|ZP_02145763.1| Holliday junction DNA helicase B [Phaeobacter gallaeciensis BS107]
gi|161388269|gb|EDQ12623.1| Holliday junction DNA helicase B [Phaeobacter gallaeciensis BS107]
Length = 379
Score = 73.2 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 35/221 (15%), Positives = 65/221 (29%), Gaps = 28/221 (12%)
Query: 59 EPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRM 118
EP + + ++ E D V E + +DQ + A + + + +
Sbjct: 176 EPAQESQQATAEAAANDRIVTEEVEAETDQVASAAPAQSLRPRRRPDRPEPVAQPEPEPT 235
Query: 119 PVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDA 178
P + ++ + +
Sbjct: 236 AAEP----------------ETAPSPDRSDAVEDALAAALAGGGEVEAPEPSGPPLTSGE 279
Query: 179 IAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKIN------VDVVGGTELVR 232
+R V WN+ S + V + L Q G + + GG+
Sbjct: 280 KDALRVAVQQCWNVGSLSSEALRTTVVVSVALTQDG----RPEEGSIRMLSSTGGSGSAA 335
Query: 233 RMLRENARKAVIKSQA--FRLSPSTYKSWRNITLFFVPSKM 271
AR+A+++ A F+L Y WRNI + F P +M
Sbjct: 336 NQAFGAARRAILRCGARGFQLPSDKYAQWRNIEMTFNPERM 376
>gi|23015568|ref|ZP_00055340.1| hypothetical protein Magn03010005 [Magnetospirillum magnetotacticum
MS-1]
Length = 308
Score = 73.2 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 28/154 (18%), Positives = 58/154 (37%), Gaps = 9/154 (5%)
Query: 120 VSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIP----S 175
+ DK+K + ++ L+ +K + + + + S P S
Sbjct: 153 LKSVDKKKPTPKDELDKLLKST----EKLKPSTPENKTATQTAPQSVRGSASHNPNEPVS 208
Query: 176 QDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVL-GKINVDVVGGTELVRRM 234
+R + WN+P+ K KL V + + G V ++ +D + +
Sbjct: 209 MTERDRIRAHIERFWNVPAGAKDADKLVVMIKVSVLPDGTVTSAEVQLDPMMMVNPYYQA 268
Query: 235 LRENARKAVIKSQAFRLSPSTYKSWRNITLFFVP 268
++AR+AV + + Y +++ TL F P
Sbjct: 269 AADSARRAVRAASPLPIPVDKYDQFKDFTLAFNP 302
>gi|163742235|ref|ZP_02149623.1| tonB domain protein, putative [Phaeobacter gallaeciensis 2.10]
gi|161384565|gb|EDQ08946.1| tonB domain protein, putative [Phaeobacter gallaeciensis 2.10]
Length = 379
Score = 73.2 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 25/110 (22%), Positives = 40/110 (36%), Gaps = 12/110 (10%)
Query: 170 RKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKIN------VD 223
+ +R V WN+ S + V + L Q G + +
Sbjct: 271 SGPPLTSGEKDALRVAVQQCWNVGSLSSEALRTTVVVSVALTQDG----RPEEGSIRMLS 326
Query: 224 VVGGTELVRRMLRENARKAVIKSQA--FRLSPSTYKSWRNITLFFVPSKM 271
GG+ AR+A+++ A F+L Y WRNI + F P +M
Sbjct: 327 STGGSGSAANQAFGAARRAILRCGARGFQLPSDKYAQWRNIEMTFNPERM 376
>gi|163745824|ref|ZP_02153183.1| tonB domain protein, putative [Oceanibulbus indolifex HEL-45]
gi|161380569|gb|EDQ04979.1| tonB domain protein, putative [Oceanibulbus indolifex HEL-45]
Length = 395
Score = 72.8 bits (177), Expect = 4e-11, Method: Composition-based stats.
Identities = 28/133 (21%), Positives = 50/133 (37%), Gaps = 10/133 (7%)
Query: 140 GISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRF 199
A ++ V+ +P+ S +R V A WNI +
Sbjct: 265 STEDAIADALSEVLGQPEATAPTP------SGPPLSSGERESLRVAVSACWNIGALSTEA 318
Query: 200 KKLRVKMHFQLNQKGFVLGKI--NVDVVGGTELVRRMLRENARKAVIKS--QAFRLSPST 255
+ V + Q+N G + + GG++ R E A++AVI+ ++L
Sbjct: 319 ARTTVVVGMQMNTDGTPVASSIRLLSSSGGSDTAARQAYEAAKRAVIRCGSSGYKLPQEK 378
Query: 256 YKSWRNITLFFVP 268
Y W++I + F P
Sbjct: 379 YSQWQDIEMTFDP 391
>gi|254461448|ref|ZP_05074864.1| possible TolA protein [Rhodobacterales bacterium HTCC2083]
gi|206678037|gb|EDZ42524.1| possible TolA protein [Rhodobacteraceae bacterium HTCC2083]
Length = 355
Score = 72.8 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 31/207 (14%), Positives = 72/207 (34%), Gaps = 19/207 (9%)
Query: 70 ENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKIS 129
+N ++ S + + ++ E ++ EQ ++ P + + +
Sbjct: 158 DNSAQEASEPDANAEQVVEEQSETAPEEAATEIVTEAEQP--SASAPSATTRPRARPRDT 215
Query: 130 KATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIAN 189
A ++ + S ++ + P + +S + + + V
Sbjct: 216 AAASEAK-QSDTSSGVNAALAEALGEPAASDEVS-------GSTLTAGEVNGFKLAVQDC 267
Query: 190 WNIPSDFKRFKKLRVKMHFQLNQKGFVL-GKINVDVVGGTELVRRMLREN---ARKAVIK 245
W + + + V + L+Q G V+ G I + G R + AR+A+
Sbjct: 268 WAVDIG-SQSSDVVVVVTMSLDQSGKVVPGSIELKSSSGGAG--RAVETAFLRARRAIFG 324
Query: 246 SQ--AFRLSPSTYKSWRNITLFFVPSK 270
Q + L Y+ W++I + F P +
Sbjct: 325 CQNDGYDLPDDKYEQWKDIEVTFNPKE 351
>gi|88607845|ref|YP_505511.1| TonB family protein [Anaplasma phagocytophilum HZ]
gi|88598908|gb|ABD44378.1| TonB family protein [Anaplasma phagocytophilum HZ]
Length = 275
Score = 72.5 bits (176), Expect = 6e-11, Method: Composition-based stats.
Identities = 59/278 (21%), Positives = 99/278 (35%), Gaps = 33/278 (11%)
Query: 8 AISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIY---NEDYHSSKYKKIEEPV--V 62
A+ +H++ LL++ V L+V S E V N D + K + V +
Sbjct: 16 ALGKNIHIISSLLVHLVMGVFLVVRTSPPESYGVSTASCCPNCDGVAIKSQARTADVDYI 75
Query: 63 QFKGSSQENLVRDFSVQENGDRFS-------DQTKTHATENETKRSSSSKGEQALKESAL 115
GS NLV + F+ QT RS + A +E +
Sbjct: 76 TSAGSQVANLVNSTEDVQRSGLFTKPGIQPPSQTSKKPARMSLARSDIAVNTLASQEDLM 135
Query: 116 LRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPS 175
+ PV Y++Q ++ TN + F KSI V+ E +
Sbjct: 136 VVQPVYEYEQQSGARYTNPHKKGF---FGYSKSIFQNVLNNHAPEEV------------- 179
Query: 176 QDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFV-LGKINVDVVGGTELVRRM 234
+ + + W IP+ VK+ ++ G V I+ + + + R
Sbjct: 180 ---VDSLSEQFAKCWTIPAGIDDDSNAVVKIKLAMDPSGKVTTATISDTNLYDNDPLYRA 236
Query: 235 LRENARKAVIKSQAFR-LSPSTYKSWRNITLFFVPSKM 271
L ++A +AV K L + Y W I L F P ++
Sbjct: 237 LADSALRAVHKCNPITELRGTDYSIWNEIVLTFNPQQV 274
>gi|307294754|ref|ZP_07574596.1| putative TolA [Sphingobium chlorophenolicum L-1]
gi|306879228|gb|EFN10446.1| putative TolA [Sphingobium chlorophenolicum L-1]
Length = 303
Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 31/167 (18%), Positives = 64/167 (38%), Gaps = 7/167 (4%)
Query: 107 EQALKESALLRMPVSPYDKQKI-SKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKV 165
E+ +A ++ P K ++A+ + + + K +
Sbjct: 133 EKPKPAAAPVKASQKPATKPNAPARASGQGKAEKPRGSLLGKDFLKGIDAEADAPRKPAP 192
Query: 166 EKSSRKRIPSQDAIAI-VRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDV 224
++ + A+ +R +V +W PS ++LR + QL++ G ++G+ V
Sbjct: 193 PPAAAMGPAQKAALDAEIRRQVKPHWKSPSG-ADIEQLRTFVDVQLSRDGSIVGQPQVFN 251
Query: 225 VGGTELVRRMLR----ENARKAVIKSQAFRLSPSTYKSWRNITLFFV 267
G R E A KA+ + F+L P Y W+++ + F
Sbjct: 252 TTGITASNRSQVTLHQELAVKAIRLAAPFKLPPDLYDGWKSLRISFD 298
>gi|269958991|ref|YP_003328780.1| hypothetical protein ACIS_00972 [Anaplasma centrale str. Israel]
gi|269848822|gb|ACZ49466.1| hypothetical protein ACIS_00972 [Anaplasma centrale str. Israel]
Length = 281
Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 31/139 (22%), Positives = 56/139 (40%), Gaps = 5/139 (3%)
Query: 135 EQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPS 194
EQ+L GI A ++ + + E+ S + K + +R++ + W +P+
Sbjct: 143 EQELSGILQAVQREANIGP-PGAENEVDSGEARYDEKHELAVRIANSIRSKFVECWTVPA 201
Query: 195 DFKRFKKLRVKMHFQLNQKGFVL--GKINVDVVGGTELVRRMLRENARKAVIKSQAFRLS 252
K + + VK+ L G V+ G + + + R + ++A +AV K
Sbjct: 202 GAKDVESMVVKVGVVLAPSGKVVRAGIADTHLYN-SNPFFRAMADSALRAVYKCSPLTGL 260
Query: 253 P-STYKSWRNITLFFVPSK 270
S Y W I L F P
Sbjct: 261 SRSDYNLWHEIVLTFNPKS 279
>gi|310816578|ref|YP_003964542.1| Possible TolA protein [Ketogulonicigenium vulgare Y25]
gi|308755313|gb|ADO43242.1| Possible TolA protein [Ketogulonicigenium vulgare Y25]
Length = 406
Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 33/199 (16%), Positives = 69/199 (34%), Gaps = 17/199 (8%)
Query: 87 DQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEK 146
D+ + E + ++ ++ +A +P Q+ + A + Q +E
Sbjct: 208 DEAQEQTAPPEATTQTVTEADRP--AAAPTNVPRPQSRPQRQAAAPTQSATPQTPPASEA 265
Query: 147 -------KSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRF 199
+ D ++ + S+ + S R V W +
Sbjct: 266 AASTPAANNNDDILAALAAAQDTPSASTSAPQVQMSGAEQDAFRIAVQGCWAVDPGAAAA 325
Query: 200 KKLRVKMHFQLNQKGFVLG-KINVDVVGGTELVRRMLRENARKAVIKSQ----AFRLSPS 254
+ V + F+L+ G V+G + + G+ + E AR+AV++ Q S
Sbjct: 326 QV-TVVVGFELDTSGRVIGNNVRMVSSNGSGAAEQTAFEAARRAVLRCQGDGYPLSHPLS 384
Query: 255 T--YKSWRNITLFFVPSKM 271
S ++ + F PS+M
Sbjct: 385 QAVLASGQSFEIEFDPSQM 403
>gi|149915619|ref|ZP_01904145.1| Holliday junction DNA helicase B [Roseobacter sp. AzwK-3b]
gi|149810511|gb|EDM70354.1| Holliday junction DNA helicase B [Roseobacter sp. AzwK-3b]
Length = 380
Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 45/226 (19%), Positives = 79/226 (34%), Gaps = 17/226 (7%)
Query: 59 EPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRM 118
EP V ++ V D EN + ++ E+ ++ EQ SA
Sbjct: 156 EPDVAIDEVERQETVPDAEAAENVEPETEA----TAPEESTTEIVTEAEQVDPASAAPSR 211
Query: 119 PVSPYDKQKISKATNKEQDLQGIS-----FAEKKSIDTVVVRPDKKELLSKV----EKSS 169
+ P + + + Q A + D V E L + + +
Sbjct: 212 SLRPKTRPAQPQTAQPQPAEQTQPAEDTRTAARPQPDESAVNDALAEALGQAGGADQGAP 271
Query: 170 RKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGF-VLGKINV-DVVGG 227
+ +R V WN+ S + V + ++ + V G I + GG
Sbjct: 272 SGPPLTAGEKDALRVSVQQCWNVGSLSSEALRTTVVVKVRMGEDAKPVSGSIELLSSSGG 331
Query: 228 TELVRRMLRENARKAVIKSQA--FRLSPSTYKSWRNITLFFVPSKM 271
++ R E AR+A+I+ A + L Y WR+I + F P +M
Sbjct: 332 SDAAARQAYEAARRAIIRCGANGYDLPKDKYDHWRDIEMTFNPERM 377
>gi|254486688|ref|ZP_05099893.1| conserved hypothetical protein [Roseobacter sp. GAI101]
gi|214043557|gb|EEB84195.1| conserved hypothetical protein [Roseobacter sp. GAI101]
Length = 323
Score = 70.5 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 27/124 (21%), Positives = 47/124 (37%), Gaps = 4/124 (3%)
Query: 152 VVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLN 211
V D + + S + V A WN+ S + V + +
Sbjct: 197 VPDELDHRLAAPTAPYLPSEASLSPEEKQAFLLAVSACWNVGSLSSEALRTTVTVEMAMK 256
Query: 212 QKGF-VLGKINVDVV-GGTELVRRMLRENARKAVIKSQA--FRLSPSTYKSWRNITLFFV 267
G + G I + GG+E E AR+++I+ A F+L + +W+ +TL F
Sbjct: 257 PDGTPIAGSIQLASSFGGSEAAVTQAFEAARRSIIRCGARGFQLPAEKFDAWKEMTLMFN 316
Query: 268 PSKM 271
+M
Sbjct: 317 AERM 320
>gi|296283272|ref|ZP_06861270.1| TonB protein [Citromicrobium bathyomarinum JL354]
Length = 273
Score = 70.1 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 23/109 (21%), Positives = 44/109 (40%), Gaps = 5/109 (4%)
Query: 163 SKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINV 222
+++ S A + ++ +W PS +++ + FQLN+ G + G+ +
Sbjct: 161 TRIPASQIGNSAKASIAAAISRQIKPHWQPPSG-PDVEQIVSYISFQLNEDGSLKGRPRL 219
Query: 223 DVVGGTELVRRMLRE----NARKAVIKSQAFRLSPSTYKSWRNITLFFV 267
G R E A +AV + F L P Y +W+++T
Sbjct: 220 VRQTGVNETNRAQAERHAEQAIRAVQLAAPFDLPPEYYNAWKSVTANLD 268
>gi|254994807|ref|ZP_05276997.1| hypothetical protein AmarM_01382 [Anaplasma marginale str.
Mississippi]
Length = 281
Score = 70.1 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 31/137 (22%), Positives = 55/137 (40%), Gaps = 5/137 (3%)
Query: 135 EQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPS 194
EQ+L GI A ++ + + E+ S K K + +R+R + W +P+
Sbjct: 143 EQELSGILQAVQREANIGP-PGAENEVDSGEAKYDEKHELAVRIANSIRSRFVECWTVPA 201
Query: 195 DFKRFKKLRVKMHFQLNQKGFVLGKINVDVVG--GTELVRRMLRENARKAVIKSQAFRLS 252
K + + VK+ L G V+ + + + R + ++A +AV K
Sbjct: 202 GAKDVENMVVKVGVVLAPSGKVV-RAGITDTHLYNSNPFFRAVADSALRAVYKCSPLMGL 260
Query: 253 P-STYKSWRNITLFFVP 268
+ Y W I L F P
Sbjct: 261 NRNDYNLWHEIVLTFNP 277
>gi|255002935|ref|ZP_05277899.1| hypothetical protein AmarPR_01262 [Anaplasma marginale str. Puerto
Rico]
gi|255004060|ref|ZP_05278861.1| hypothetical protein AmarV_01361 [Anaplasma marginale str.
Virginia]
Length = 281
Score = 70.1 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 31/137 (22%), Positives = 55/137 (40%), Gaps = 5/137 (3%)
Query: 135 EQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPS 194
EQ+L GI A ++ + + E+ S K K + +R+R + W +P+
Sbjct: 143 EQELSGILQAVQREANIGP-PGAENEVDSGEAKYDEKHELAVRIANSIRSRFVECWTVPA 201
Query: 195 DFKRFKKLRVKMHFQLNQKGFVLGKINVDVVG--GTELVRRMLRENARKAVIKSQAFRLS 252
K + + VK+ L G V+ + + + R + ++A +AV K
Sbjct: 202 GAKDVENMVVKVGVVLAPSGKVV-RAGITDTHLYNSNPFFRAVADSALRAVYKCSPLMGL 260
Query: 253 P-STYKSWRNITLFFVP 268
+ Y W I L F P
Sbjct: 261 NRNDYNLWHEIVLTFNP 277
>gi|56416593|ref|YP_153667.1| hypothetical protein AM328 [Anaplasma marginale str. St. Maries]
gi|222474960|ref|YP_002563375.1| hypothetical protein AMF_245 [Anaplasma marginale str. Florida]
gi|56387825|gb|AAV86412.1| hypothetical protein AM328 [Anaplasma marginale str. St. Maries]
gi|222419096|gb|ACM49119.1| Conserved hypothetical protein [Anaplasma marginale str. Florida]
Length = 283
Score = 70.1 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 31/137 (22%), Positives = 55/137 (40%), Gaps = 5/137 (3%)
Query: 135 EQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPS 194
EQ+L GI A ++ + + E+ S K K + +R+R + W +P+
Sbjct: 145 EQELSGILQAVQREANIGP-PGAENEVDSGEAKYDEKHELAVRIANSIRSRFVECWTVPA 203
Query: 195 DFKRFKKLRVKMHFQLNQKGFVLGKINVDVVG--GTELVRRMLRENARKAVIKSQAFRLS 252
K + + VK+ L G V+ + + + R + ++A +AV K
Sbjct: 204 GAKDVENMVVKVGVVLAPSGKVV-RAGITDTHLYNSNPFFRAVADSALRAVYKCSPLMGL 262
Query: 253 P-STYKSWRNITLFFVP 268
+ Y W I L F P
Sbjct: 263 NRNDYNLWHEIVLTFNP 279
>gi|89053463|ref|YP_508914.1| CheA signal transduction histidine kinase [Jannaschia sp. CCS1]
gi|88863012|gb|ABD53889.1| Cell division and transport-associated protein TolA [Jannaschia sp.
CCS1]
Length = 393
Score = 69.8 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 28/109 (25%), Positives = 43/109 (39%), Gaps = 10/109 (9%)
Query: 170 RKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQK-----GFVLGKINVDV 224
SQ R V A WN+ + V + F + + G + ++
Sbjct: 285 SGPPLSQGVRDGFRVAVQACWNVGALSTEALGTTVVVAFDMARDARPDAGTIR---MIEF 341
Query: 225 VGGTELVRRMLRENARKAVIKSQA--FRLSPSTYKSWRNITLFFVPSKM 271
GG+++ R E AR+A+I+ A F L +Y W I L F P M
Sbjct: 342 SGGSDVAARQAYEAARRAIIRCGANGFNLPLESYDRWSQIELVFNPEGM 390
>gi|149202851|ref|ZP_01879822.1| tonB domain protein, putative [Roseovarius sp. TM1035]
gi|149143397|gb|EDM31433.1| tonB domain protein, putative [Roseovarius sp. TM1035]
Length = 379
Score = 69.0 bits (167), Expect = 6e-10, Method: Composition-based stats.
Identities = 29/112 (25%), Positives = 46/112 (41%), Gaps = 4/112 (3%)
Query: 164 KVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVL-GKINV 222
+ + + + +R V WN+ S V + ++ + G G I +
Sbjct: 265 QTDTAPSGPPLTSGEKDALRVAVQQCWNVGSLSTEALGTTVVVSVRMGEDGRPDNGSIRM 324
Query: 223 DV-VGGTELVRRMLRENARKAVIKSQA--FRLSPSTYKSWRNITLFFVPSKM 271
D GG + R E AR+A+I+ A F L P Y WR+I + F P M
Sbjct: 325 DSFSGGGDAAARQAFEAARRAIIRCGANGFNLPPEKYDQWRDIEMTFNPESM 376
>gi|84501651|ref|ZP_00999823.1| tonB domain protein, putative [Oceanicola batsensis HTCC2597]
gi|84390272|gb|EAQ02831.1| tonB domain protein, putative [Oceanicola batsensis HTCC2597]
Length = 390
Score = 69.0 bits (167), Expect = 7e-10, Method: Composition-based stats.
Identities = 27/106 (25%), Positives = 42/106 (39%), Gaps = 12/106 (11%)
Query: 174 PSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKIN------VDVVGG 227
+ +R V A WN S + V + +++ G + + GG
Sbjct: 286 LTSGERDALRVAVSACWNTGSLSTDALRTTVVVGVDMSEDG----RPKNDTIRLISSTGG 341
Query: 228 TELVRRMLRENARKAVIKSQA--FRLSPSTYKSWRNITLFFVPSKM 271
R E AR+A+I+ A F L Y+ WR+I + F P KM
Sbjct: 342 AGDAERQAFEAARRAIIRCGAKGFGLPVDKYEHWRDIEMTFNPEKM 387
>gi|99082206|ref|YP_614360.1| TonB domain-containing protein [Ruegeria sp. TM1040]
gi|99038486|gb|ABF65098.1| TonB domain protein putative [Ruegeria sp. TM1040]
Length = 383
Score = 68.6 bits (166), Expect = 9e-10, Method: Composition-based stats.
Identities = 26/106 (24%), Positives = 45/106 (42%), Gaps = 4/106 (3%)
Query: 170 RKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFV-LGKINV-DVVGG 227
++ +R V WN+ S V + L+++G +G I + GG
Sbjct: 275 SGPPMTRGEKDALRIAVSQCWNLGSLSSEALLTEVVVGVTLSREGVPDIGSIRLLSSTGG 334
Query: 228 TELVRRMLRENARKAVIKSQA--FRLSPSTYKSWRNITLFFVPSKM 271
++ + E AR+A+I+ + F L Y WR+I + F P M
Sbjct: 335 SDSSAKQAYEAARRAIIRCGSRGFDLPADKYAQWRDIEMTFNPEGM 380
>gi|149185616|ref|ZP_01863932.1| TonB protein [Erythrobacter sp. SD-21]
gi|148830836|gb|EDL49271.1| TonB protein [Erythrobacter sp. SD-21]
Length = 264
Score = 67.8 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 24/115 (20%), Positives = 46/115 (40%), Gaps = 10/115 (8%)
Query: 157 DKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFV 216
+ + SK+ S++ + V ++ +W + L ++ F+LN G +
Sbjct: 151 ETRAPASKIGASTKASLFQ-----AVGRQLRPHWRPVDG-ADRELLVSQVRFRLNPDGSL 204
Query: 217 LGKINVDVVGGTELVRRMLR----ENARKAVIKSQAFRLSPSTYKSWRNITLFFV 267
G + G R ENA +AV + F L Y++W+ +T+ F
Sbjct: 205 AGAPQLRGQRGITDANRAQASRHAENAIRAVQLAAPFDLPEEYYEAWKVVTVDFD 259
>gi|85706712|ref|ZP_01037804.1| tonB domain protein, putative [Roseovarius sp. 217]
gi|85668770|gb|EAQ23639.1| tonB domain protein, putative [Roseovarius sp. 217]
Length = 381
Score = 67.8 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 40/203 (19%), Positives = 66/203 (32%), Gaps = 8/203 (3%)
Query: 77 SVQENGDRFSDQTKTHA-TENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKE 135
VQE + + E + S +L+ PV + ++
Sbjct: 176 EVQEEPSEATAPEEAATEIVTEAEEPEQSAPTSSLRPKPRPARPVEQAETPAPAETPEPA 235
Query: 136 QDLQGISFAEKKSIDTVVVRPDKKELL---SKVEKSSRKRIPSQDAIAIVRNRVIANWNI 192
A + D V L + + + + +R V WN+
Sbjct: 236 ATETPKPTATAPATDQSAVNDALAAALGASQQTDTAPSGPPLTSGEKDALRVAVQQCWNV 295
Query: 193 PSDFKRFKKLRVKMHFQLNQKGFVL-GKINVDV-VGGTELVRRMLRENARKAVIKSQA-- 248
S V + ++ + G G I +D GG + R E AR+A+I+ A
Sbjct: 296 GSLSTEALGTTVVVSVRMGEDGRPDNGSIRMDSFSGGADAAARQAFEAARRAIIRCGANG 355
Query: 249 FRLSPSTYKSWRNITLFFVPSKM 271
F L Y WR+I + F P M
Sbjct: 356 FNLPADKYDQWRDIEMTFNPESM 378
>gi|148258090|ref|YP_001242675.1| putative TonB protein [Bradyrhizobium sp. BTAi1]
gi|146410263|gb|ABQ38769.1| Cell division and transport-associated protein TolA [Bradyrhizobium
sp. BTAi1]
Length = 336
Score = 67.8 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 22/93 (23%), Positives = 37/93 (39%), Gaps = 2/93 (2%)
Query: 175 SQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRM 234
S +A+ + +V W P + V + +L + G + G V V R
Sbjct: 240 SASWVALFQQQVNRCWKPPYSGVDANPV-VAFNVRLRRDGTLDGPP-VPVGAADTPFLRA 297
Query: 235 LRENARKAVIKSQAFRLSPSTYKSWRNITLFFV 267
R++A++A+I Q + L P Y W F
Sbjct: 298 YRDSAQRAIIACQPYNLPPKLYDDWSYFQPVFN 330
>gi|119383437|ref|YP_914493.1| TolA family protein [Paracoccus denitrificans PD1222]
gi|119373204|gb|ABL68797.1| Cell division and transport-associated protein TolA [Paracoccus
denitrificans PD1222]
Length = 514
Score = 67.4 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 24/100 (24%), Positives = 42/100 (42%), Gaps = 4/100 (4%)
Query: 174 PSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVL-GKINVDV-VGGTELV 231
SQ R V WN S + V + F + G V G + + GG++
Sbjct: 409 LSQGEKDGFRVAVEQCWNRGSLSTEASRTTVSVQFSMAPDGTVEKGSLRMIGHDGGSDAA 468
Query: 232 RRMLRENARKAVIKSQA--FRLSPSTYKSWRNITLFFVPS 269
+ E AR+A++ + ++L P Y W+++ + F S
Sbjct: 469 AKQAYEAARRAILMCEKGGYKLPPEKYNRWKDVIIDFNAS 508
>gi|312115992|ref|YP_004013588.1| TolA [Rhodomicrobium vannielii ATCC 17100]
gi|311221121|gb|ADP72489.1| putative TolA [Rhodomicrobium vannielii ATCC 17100]
Length = 348
Score = 67.4 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 46/92 (50%), Gaps = 1/92 (1%)
Query: 180 AIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENA 239
+V++R+ NW++P + V++H +LN+ G ++ V + T + + + A
Sbjct: 255 DLVQSRIEQNWDLPLGAALGEMGLVRLHIELNRDGTLIRPPMV-MDAPTSPTGQAMADAA 313
Query: 240 RKAVIKSQAFRLSPSTYKSWRNITLFFVPSKM 271
+A ++ + + P+ Y R++ L F P M
Sbjct: 314 IRAAMRGAPYSIPPAQYDRCRDMVLRFNPRDM 345
>gi|39934771|ref|NP_947047.1| hypothetical protein RPA1701 [Rhodopseudomonas palustris CGA009]
gi|39648621|emb|CAE27142.1| conserved hypothetical protein [Rhodopseudomonas palustris CGA009]
Length = 256
Score = 67.1 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 20/99 (20%), Positives = 41/99 (41%), Gaps = 2/99 (2%)
Query: 173 IPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVR 232
S DA+A +R R+ A ++P+ +++ + L G + + + +
Sbjct: 156 NISADAVAALRKRLKACASLPAGLSPSDNVKIVIRVGLTPDGRLAQEPFL-IEASASAKG 214
Query: 233 RMLRENARKAVIKSQAFRLSP-STYKSWRNITLFFVPSK 270
L + A A+ Q + + P Y+ WR + + F P
Sbjct: 215 PALMKGAISALEACQPYTMLPADKYREWRILDIGFTPQD 253
>gi|167648383|ref|YP_001686046.1| hypothetical protein Caul_4428 [Caulobacter sp. K31]
gi|167350813|gb|ABZ73548.1| conserved hypothetical protein [Caulobacter sp. K31]
Length = 270
Score = 67.1 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 27/138 (19%), Positives = 54/138 (39%), Gaps = 3/138 (2%)
Query: 135 EQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDA-IAIVRNRVIANWNIP 193
E+ L A K + P + E ++ + Q A IA +++ + WN
Sbjct: 129 EKTLAKTPKATGKPVANAAKGPTRPETATQARPGAGAMTGLQAAAIAGMKDEIQRRWNPN 188
Query: 194 SDFKRFKKLRVKMHFQLNQKGFVLGKINV-DVVGGTELVRRMLRENARKAVIKSQAFRLS 252
+ + ++V++ F+L G ++G++ D + + A +AV +S F
Sbjct: 189 CEVEGGGDIQVRVAFKLATGGRIVGQVTAGDAERSPNSAVKAAADRAIRAVYQSAPFEGL 248
Query: 253 PSTYKSWRNITLFFVPSK 270
P Y + + L F
Sbjct: 249 PPDYYG-QQLNLNFKARD 265
>gi|209886403|ref|YP_002290260.1| protein TolA [Oligotropha carboxidovorans OM5]
gi|209874599|gb|ACI94395.1| protein TolA [Oligotropha carboxidovorans OM5]
Length = 312
Score = 66.7 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 55/314 (17%), Positives = 113/314 (35%), Gaps = 55/314 (17%)
Query: 1 MRLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYH--SSKYKKIE 58
M+++ LA S+ LH + + +F+ ++ S E L VD I + + K +
Sbjct: 1 MKIDRTLAASVALHALVIGWGLVSFSTRMY-ETSPEESLPVDIISADQLAKVTQGIKTGK 59
Query: 59 EPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRM 118
+ V K ++ + + D+ +T T+ + + K+ +
Sbjct: 60 KEV--TKPLVEKVAEPSPPQDDPVGKVDDKKQTVVTDAAPEPPPKPVEKPVEKKPDPPK- 116
Query: 119 PVSPYDKQKISKATNKEQD---LQGISFAEKKSIDTVVV-RPDKKELLSKVEKSSRKRIP 174
PV+ ++ +K K+ D + I+ A KK + K K + R R+
Sbjct: 117 PVAQEKPKEETKPAEKKPDPAKVDPIAEALKKEQAKKPAPKEQAKAAPPKPPEPKRDRVF 176
Query: 175 SQDAIAIV----------------------------------------RNRVIANWNIPS 194
Q IA + +++V W P
Sbjct: 177 DQSKIAALLDKRDPSRRSVTGSELNSQAALGLSHGRAADNSATWGAMFKSQVERCWKKPY 236
Query: 195 DFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPS 254
+++ +L + G + V + G R+ +E+AR+A+I+ Q ++L +
Sbjct: 237 GGIEAQQIEASFDIRLKRDGTLEAMP-VPLPGSNSPYFRVYQESARRAIIECQPYKLPAA 295
Query: 255 TYKSWRNITLFFVP 268
++ W+ FF P
Sbjct: 296 YFEEWK----FFEP 305
>gi|85374729|ref|YP_458791.1| TonB protein [Erythrobacter litoralis HTCC2594]
gi|84787812|gb|ABC63994.1| TonB protein [Erythrobacter litoralis HTCC2594]
Length = 279
Score = 66.7 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 27/110 (24%), Positives = 47/110 (42%), Gaps = 6/110 (5%)
Query: 163 SKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINV 222
++V S + + + +W PS +++ + F LN+ G + G+ +V
Sbjct: 166 TRVPASQIGASARASLVQAIAREIKPHWQPPSG-PEVEEIVTVLRFSLNEDGSLAGRPSV 224
Query: 223 DVVGGTELVRRMLREN----ARKAVIKSQAFRLSPSTYKSWRNITLF-FV 267
G + R E A +AV ++ F L P Y +WRNI+ F F
Sbjct: 225 VRQTGVNEINRAQAERHGELAIRAVQRAAPFDLPPEYYNAWRNISAFSFD 274
>gi|288957824|ref|YP_003448165.1| hypothetical protein AZL_009830 [Azospirillum sp. B510]
gi|288910132|dbj|BAI71621.1| hypothetical protein AZL_009830 [Azospirillum sp. B510]
Length = 388
Score = 66.3 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 36/194 (18%), Positives = 67/194 (34%), Gaps = 20/194 (10%)
Query: 95 ENETKRSSSSKGEQALKESALLRMPVSPYDK-----QKISKATNKEQDLQGISFAEKKSI 149
E ++ K E K+ P KI + N + D + + +
Sbjct: 197 PKEVAKAEPKKAEAPAKQPEKPSAKTDPLSDLLSNVGKIKPSDNPKADGKAQAS---NNS 253
Query: 150 DTVVVRPDKKELLSKVEKSSRKRI----PSQDAIAIVRNRVIANWNIPSDFKRFKKLRVK 205
D + + K++ PS A+ +R ++ NWN S K ++++
Sbjct: 254 DAKPSQKTASAAPAGAAKATNGPDKPFKPSGRALDAIRGQLSKNWNFDSGRKDAASMQIE 313
Query: 206 MHFQLNQKGFVLG---KINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPST-----YK 257
+H ++ + V+ ++ R + A +AV +S L S Y+
Sbjct: 314 IHVEVGRDHSVIRAWIDEKYRSRYMSDAAFRASADAAVRAVKRSSPLDLLASEFTSQTYE 373
Query: 258 SWRNITLFFVPSKM 271
WR I F P M
Sbjct: 374 DWRFIVFNFDPRDM 387
>gi|91205082|ref|YP_537437.1| periplasmic protein TonB [Rickettsia bellii RML369-C]
gi|157827581|ref|YP_001496645.1| periplasmic protein TonB [Rickettsia bellii OSU 85-389]
gi|91068626|gb|ABE04348.1| Periplasmic protein TonB [Rickettsia bellii RML369-C]
gi|157802885|gb|ABV79608.1| Periplasmic protein TonB [Rickettsia bellii OSU 85-389]
Length = 323
Score = 66.3 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 30/153 (19%), Positives = 67/153 (43%), Gaps = 11/153 (7%)
Query: 130 KATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKS-------SRKRIPSQDAIAIV 182
K +K +L + ++S + V+ +K++ +KV+ + S +++
Sbjct: 171 KQESKTDELDSLLKNLEQSSEGDNVKSNKQKRSAKVDNKKEAKGVYTEGLPLSDSESSLI 230
Query: 183 RNRVIANWN-IPSDFKRFKKLRVKMHFQLNQKGFVLGKI--NVDVVGGTELVRRMLRENA 239
+ ++ +WN IP+ + K+++ + L++ G V G V L ++A
Sbjct: 231 KRQIERHWNNIPAGARGNNKVKIIISIILDKAGNVEQAKVKEKICPGIPNSVCEALADSA 290
Query: 240 RKAVIKSQAFRLS-PSTYKSWRNITLFFVPSKM 271
+AV K+ P+ + W+ I F PS++
Sbjct: 291 VRAVWKASPIENLDPARFNHWKEINFNFDPSRL 323
>gi|254294749|ref|YP_003060772.1| TonB domain-containing protein [Hirschia baltica ATCC 49814]
gi|254043280|gb|ACT60075.1| TonB domain-containing protein [Hirschia baltica ATCC 49814]
Length = 297
Score = 66.3 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 30/155 (19%), Positives = 55/155 (35%), Gaps = 20/155 (12%)
Query: 130 KATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIAN 189
K KEQ ++ + + D R + + ++K + A R+R A
Sbjct: 142 KEEKKEQTNSFLNSVLQTTEDKKKTREREYKAAPDLKKVENANQNKRSAGD--RSRDTAT 199
Query: 190 WNI-------------PSDFKRFKKLRVKMHFQLNQKGFVLGKIN---VDVVGGTELVRR 233
W PSD ++L+V N+ G ++ ++ G + R
Sbjct: 200 WTTMLKSKIETKCFRDPSDMANAERLQVTYKITFNKDGSLMRSPRRISPTIIPGNDQQMR 259
Query: 234 MLRENARKAVIKSQAFR--LSPSTYKSWRNITLFF 266
+ NA +A+ K + L Y W++ T F
Sbjct: 260 IFDINATRAIEKCAPYNDILPAEYYDEWKDFTFVF 294
>gi|110679375|ref|YP_682382.1| hypothetical protein RD1_2096 [Roseobacter denitrificans OCh 114]
gi|109455491|gb|ABG31696.1| conserved hypothetical protein [Roseobacter denitrificans OCh 114]
Length = 346
Score = 65.9 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 29/106 (27%), Positives = 43/106 (40%), Gaps = 4/106 (3%)
Query: 170 RKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGF-VLGKINVD-VVGG 227
+ S +R V WN+ S V + + Q G + G I + GG
Sbjct: 238 QGPPLSAGEKDALRVAVSNCWNVGSLSTDALGTTVVVEVSMTQDGKPITGSIRMTSSSGG 297
Query: 228 TELVRRMLRENARKAVIKSQA--FRLSPSTYKSWRNITLFFVPSKM 271
+E R E AR+A+I+ A F L Y W+ I + F P +M
Sbjct: 298 SEAAARQAFEAARRAIIRCGARGFNLPVEKYSQWQEIEMTFNPERM 343
>gi|114771187|ref|ZP_01448607.1| Possible TolA protein [alpha proteobacterium HTCC2255]
gi|114548112|gb|EAU50999.1| Possible TolA protein [alpha proteobacterium HTCC2255]
Length = 375
Score = 65.5 bits (158), Expect = 7e-09, Method: Composition-based stats.
Identities = 32/204 (15%), Positives = 76/204 (37%), Gaps = 22/204 (10%)
Query: 76 FSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLR-------MPVSPYDKQKI 128
++ N + ++++ T ++ S + K + + + + P K K
Sbjct: 184 LEIELNENTPAEESTTQIVTEAEEQKSDLVPSRTSKPKSRPKNLKTTKEIAIKPKLKPKE 243
Query: 129 SKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIA 188
K+ + I + K +KKE + + ++ + + I++N++
Sbjct: 244 VVEAEKDTTAESILESLK----------EKKEPEPFLNLTPAQK---ESVVNIIKNKMRL 290
Query: 189 NWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQA 248
WN + + + + + G ++ V++ + + E AR+AVI+
Sbjct: 291 CWNPSVGVENGLTNVMILGLKFDIDGKLVESP-VNLTPNSGVGSLQAFEAARRAVIRCSP 349
Query: 249 FRLS-PSTYKSWRNITLFFVPSKM 271
+ P Y W+ + L F P M
Sbjct: 350 YNELDPEIYDGWKELNLKFNPKNM 373
>gi|299134177|ref|ZP_07027370.1| protein TolA [Afipia sp. 1NLS2]
gi|298590924|gb|EFI51126.1| protein TolA [Afipia sp. 1NLS2]
Length = 313
Score = 65.5 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 32/193 (16%), Positives = 76/193 (39%), Gaps = 12/193 (6%)
Query: 77 SVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQ 136
+ ++ D K K+ + K E +++ + +P K+K + ++ +
Sbjct: 125 EETKPAEKKPDPAKVDPIAEALKKEQAKKPEPKKQQA---QAKPTPPPKEKHERVFDQTK 181
Query: 137 DLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIV-RNRVIANWNIPSD 195
+ +K+ + + + + S + + + + +V W P
Sbjct: 182 I---AALLDKRDPTRQSMTGSELNSQAALGLSHGRSADNSATWGAMFKQQVERCWKKPYG 238
Query: 196 FKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPST 255
++++ +L Q G + V + G R+ +E+AR+A+I+ Q ++L PS
Sbjct: 239 GIEAQQIQASFDVRLKQDGTLEAMP-VPLPGSNTPYFRVYQESARRAIIECQPYKLPPSF 297
Query: 256 YKSWRNITLFFVP 268
+ W+ FF P
Sbjct: 298 FNEWK----FFEP 306
>gi|192290294|ref|YP_001990899.1| hypothetical protein Rpal_1901 [Rhodopseudomonas palustris TIE-1]
gi|192284043|gb|ACF00424.1| conserved hypothetical protein [Rhodopseudomonas palustris TIE-1]
Length = 284
Score = 65.5 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 20/99 (20%), Positives = 40/99 (40%), Gaps = 2/99 (2%)
Query: 173 IPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVR 232
S DA+A +R R+ A +P+ +++ + L G + + + +
Sbjct: 184 NISADAVAALRKRLKACAALPAGLSPSDNVKIVIRVGLTPDGRLAQEPFL-IEASASAKG 242
Query: 233 RMLRENARKAVIKSQAFRLSP-STYKSWRNITLFFVPSK 270
L + A A+ Q + + P Y+ WR + + F P
Sbjct: 243 PALMKGAIAALEACQPYTMLPADKYREWRILDIGFTPQD 281
>gi|83943917|ref|ZP_00956374.1| tonB domain protein, putative [Sulfitobacter sp. EE-36]
gi|83845164|gb|EAP83044.1| tonB domain protein, putative [Sulfitobacter sp. EE-36]
Length = 387
Score = 65.1 bits (157), Expect = 9e-09, Method: Composition-based stats.
Identities = 26/134 (19%), Positives = 49/134 (36%), Gaps = 4/134 (2%)
Query: 142 SFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKK 201
+K ++ + + + S +R V + WN+ S +
Sbjct: 251 PTTDKDAVAAALAEAMGETDAPATPAAPSGPPLSAGEKESLRVAVSSCWNVGSLSSEALR 310
Query: 202 LRVKMHFQLNQKGF--VLGKINVDVVGGTELVRRMLRENARKAVIKSQA--FRLSPSTYK 257
V + +NQ G GG++ E AR+A+I+ A ++L +
Sbjct: 311 TTVVVSVAMNQDGTPQTNSIKMTSSSGGSQGAANQAFEAARRAIIRCGARGYQLPVEKFG 370
Query: 258 SWRNITLFFVPSKM 271
W+NI + F P +M
Sbjct: 371 QWQNIEMTFNPERM 384
>gi|163733520|ref|ZP_02140963.1| hypothetical protein RLO149_17753 [Roseobacter litoralis Och 149]
gi|161393308|gb|EDQ17634.1| hypothetical protein RLO149_17753 [Roseobacter litoralis Och 149]
Length = 382
Score = 65.1 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/106 (27%), Positives = 45/106 (42%), Gaps = 4/106 (3%)
Query: 170 RKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGF-VLGKINV-DVVGG 227
+ S +R V WN+ S V + ++Q G + G I + GG
Sbjct: 274 QGPPLSAGEKDALRVEVSNCWNVGSLSTDALNTTVVVEVSMSQDGRPITGSIRMASSSGG 333
Query: 228 TELVRRMLRENARKAVIKSQA--FRLSPSTYKSWRNITLFFVPSKM 271
+E R E AR+A+I+ A F L Y W++I + F P +M
Sbjct: 334 SEAAARQAFEAARRAIIRCGARGFNLPVEKYSQWQDIEMTFNPERM 379
>gi|83954490|ref|ZP_00963201.1| tonB domain protein, putative [Sulfitobacter sp. NAS-14.1]
gi|83840774|gb|EAP79945.1| tonB domain protein, putative [Sulfitobacter sp. NAS-14.1]
Length = 389
Score = 65.1 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 26/134 (19%), Positives = 49/134 (36%), Gaps = 4/134 (2%)
Query: 142 SFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKK 201
+K ++ + + + S +R V + WN+ S +
Sbjct: 253 PTTDKDAVAAALAEAMGETDAPATPAAPSGPPLSAGEKESLRVAVSSCWNVGSLSSEALR 312
Query: 202 LRVKMHFQLNQKGF--VLGKINVDVVGGTELVRRMLRENARKAVIKSQA--FRLSPSTYK 257
V + +NQ G GG++ E AR+A+I+ A ++L +
Sbjct: 313 TTVVVSVAMNQDGTPQTNSIKMTSSSGGSQGAANQAFEAARRAIIRCGARGYQLPVEKFG 372
Query: 258 SWRNITLFFVPSKM 271
W+NI + F P +M
Sbjct: 373 QWQNIEMTFNPERM 386
>gi|241761364|ref|ZP_04759452.1| conserved hypothetical protein [Zymomonas mobilis subsp. mobilis
ATCC 10988]
gi|241374271|gb|EER63768.1| conserved hypothetical protein [Zymomonas mobilis subsp. mobilis
ATCC 10988]
Length = 359
Score = 65.1 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 21/97 (21%), Positives = 43/97 (44%), Gaps = 6/97 (6%)
Query: 181 IVRNRVIANWNIPS-DFKRFKKLRVKMHFQLNQKGFVLGKIN-VDVVGGTELVR---RML 235
++ +V +++ + ++ + + N G V G ++ G T R R +
Sbjct: 262 AIKRQVQPCYDLGALGGTDAMRIITVLRLRFNPDGSVNGVPEMIEQTGLTSDNRSYARQM 321
Query: 236 RENARKAVIKSQAFRLSPSTYK-SWRNITLFFVPSKM 271
E +R+AV++ L YK W I + F+P++M
Sbjct: 322 AEISRRAVLRCAPLHLPAELYKGGWDEIDIGFIPAQM 358
>gi|260753279|ref|YP_003226172.1| hypothetical protein Za10_1043 [Zymomonas mobilis subsp. mobilis
NCIMB 11163]
gi|258552642|gb|ACV75588.1| hypothetical protein Za10_1043 [Zymomonas mobilis subsp. mobilis
NCIMB 11163]
Length = 359
Score = 65.1 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 21/97 (21%), Positives = 43/97 (44%), Gaps = 6/97 (6%)
Query: 181 IVRNRVIANWNIPS-DFKRFKKLRVKMHFQLNQKGFVLGKIN-VDVVGGTELVR---RML 235
++ +V +++ + ++ + + N G V G ++ G T R R +
Sbjct: 262 AIKRQVQPCYDLGALGGTDAMRIITVLRLRFNPDGSVNGVPEMIEQTGLTSDNRSYARQM 321
Query: 236 RENARKAVIKSQAFRLSPSTYK-SWRNITLFFVPSKM 271
E +R+AV++ L YK W I + F+P++M
Sbjct: 322 AEISRRAVLRCAPLHLPAELYKGGWDEIDIGFIPAQM 358
>gi|283856202|ref|YP_161899.2| hypothetical protein ZMO0164 [Zymomonas mobilis subsp. mobilis ZM4]
gi|283775198|gb|AAV88788.2| conserved hypothetical protein [Zymomonas mobilis subsp. mobilis
ZM4]
Length = 359
Score = 64.8 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 21/97 (21%), Positives = 43/97 (44%), Gaps = 6/97 (6%)
Query: 181 IVRNRVIANWNIPS-DFKRFKKLRVKMHFQLNQKGFVLGKIN-VDVVGGTELVR---RML 235
++ +V +++ + ++ + + N G V G ++ G T R R +
Sbjct: 262 AIKRQVQPCYDLGALGGTDAMRIITVLRLRFNPDGSVNGVPEMIEQTGLTSDNRSYARQM 321
Query: 236 RENARKAVIKSQAFRLSPSTYK-SWRNITLFFVPSKM 271
E +R+AV++ L YK W I + F+P++M
Sbjct: 322 AEISRRAVLRCAPLHLPAELYKGGWDEIDIGFIPAQM 358
>gi|316935139|ref|YP_004110121.1| hypothetical protein Rpdx1_3823 [Rhodopseudomonas palustris DX-1]
gi|315602853|gb|ADU45388.1| hypothetical protein Rpdx1_3823 [Rhodopseudomonas palustris DX-1]
Length = 286
Score = 64.4 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 18/99 (18%), Positives = 39/99 (39%), Gaps = 2/99 (2%)
Query: 173 IPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVR 232
S +A+A +R R+ + +P+ +++ + L G + + + +
Sbjct: 186 NISAEAVAALRKRLRSCAALPAGLSPADNVKIVIRVGLTPDGRLAQEPFL-IEASASAKG 244
Query: 233 RMLRENARKAVIKSQAFRLSP-STYKSWRNITLFFVPSK 270
L A A+ Q + + P Y+ WR + + F P
Sbjct: 245 PALMRGAIAALEACQPYTMLPADKYREWRVLDIGFTPQD 283
>gi|86748803|ref|YP_485299.1| hypothetical protein RPB_1680 [Rhodopseudomonas palustris HaA2]
gi|86571831|gb|ABD06388.1| conserved hypothetical protein [Rhodopseudomonas palustris HaA2]
Length = 281
Score = 64.4 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 21/98 (21%), Positives = 42/98 (42%), Gaps = 2/98 (2%)
Query: 174 PSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRR 233
S DA+A +R R+ + +P+ +R+ + L G + + + +
Sbjct: 181 ISADAVAALRQRIKSCAALPASVGPSDNVRIVLRVALLPDGRLAQEP-ILIEASASTKGP 239
Query: 234 MLRENARKAVIKSQAFRLSP-STYKSWRNITLFFVPSK 270
L + A A++K Q + + P YK W+ + + F P
Sbjct: 240 ALMQGAIDALVKCQPYAMLPNDKYKDWKLLDIGFTPQD 277
>gi|170741557|ref|YP_001770212.1| protein TolA [Methylobacterium sp. 4-46]
gi|168195831|gb|ACA17778.1| protein TolA [Methylobacterium sp. 4-46]
Length = 464
Score = 64.0 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 22/105 (20%), Positives = 46/105 (43%), Gaps = 7/105 (6%)
Query: 168 SSRKRIPSQDA--IAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVV 225
S+ + PSQ + +++ ++ ++ P + + ++ +LN G + + +
Sbjct: 358 SAARLSPSQRDALVGLLQQQIERCYSAPPGAAQGV-VLPQLDIRLNPDGSLGAEPRILRA 416
Query: 226 GGTELVRRMLRENARKAVIKSQAFRLSPS---TYKSWRNITLFFV 267
GG+ V R + E A +AV + +R+ Y WR I F
Sbjct: 417 GGS-AVDRSIAEAAVRAVRRCAPYRIPSQFAPFYSDWRVINAEFE 460
>gi|51473506|ref|YP_067263.1| hypothetical protein RT0301 [Rickettsia typhi str. Wilmington]
gi|13235456|emb|CAC33749.1| hypothetical protein [Rickettsia typhi]
gi|51459818|gb|AAU03781.1| rickettsial conserved hypothetical protein [Rickettsia typhi str.
Wilmington]
Length = 320
Score = 64.0 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/159 (17%), Positives = 72/159 (45%), Gaps = 13/159 (8%)
Query: 125 KQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRI-------PSQD 177
++++ + +K +L + ++S + V+ +K + L KV+ + S
Sbjct: 163 RKEVKQKKHKTDELDSLLKNLEQSSEGDNVKSNKYQRLKKVDNPKEAKGVYTDMLPLSNS 222
Query: 178 AIAIVRNRVIANW-NIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGT---ELVRR 233
++++ ++ +W N+P+ + K+++ + L++ G V ++ V +
Sbjct: 223 ETSLIKRQIERHWINVPAGVRGNNKVKIIISITLDKAGNVE-QVRVIAKICPNIQSSICE 281
Query: 234 MLRENARKAVIKSQAFRLS-PSTYKSWRNITLFFVPSKM 271
L +NA +AV ++ P+ + W+ + F PSK+
Sbjct: 282 ALVDNAIRAVWQASPIENLDPARFNHWKEMNFIFDPSKL 320
>gi|83592429|ref|YP_426181.1| hypothetical protein Rru_A1093 [Rhodospirillum rubrum ATCC 11170]
gi|83575343|gb|ABC21894.1| hypothetical protein Rru_A1093 [Rhodospirillum rubrum ATCC 11170]
Length = 341
Score = 63.6 bits (153), Expect = 3e-08, Method: Composition-based stats.
Identities = 21/116 (18%), Positives = 43/116 (37%), Gaps = 2/116 (1%)
Query: 156 PDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGF 215
P + + + I +R V WN + + + V + +N G
Sbjct: 221 PQPQAARPTNQGGRISNTLTMSEIDSIRYHVEQRWNYNQGGRGVEGMSVDVQVSINPDGS 280
Query: 216 VL-GKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPSTYKSWRN-ITLFFVPS 269
V K D + V + L ++A +AV+++ + + + + TL F P+
Sbjct: 281 VARAKALRDPAFAGDAVYKALADSAERAVMRASPLPVPRDKFDMFADGFTLRFAPT 336
>gi|157825553|ref|YP_001493273.1| periplasmic protein TonB [Rickettsia akari str. Hartford]
gi|157799511|gb|ABV74765.1| Periplasmic protein TonB [Rickettsia akari str. Hartford]
Length = 326
Score = 63.6 bits (153), Expect = 3e-08, Method: Composition-based stats.
Identities = 35/171 (20%), Positives = 71/171 (41%), Gaps = 18/171 (10%)
Query: 110 LKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSS 169
L+E+A P + S N EQ +G + K + + D + V+ +
Sbjct: 165 LEETAKEVKKKEPKTDELDSLLKNLEQSSEGDN--VKSNKHKRSKKADNAKEAKGVD--T 220
Query: 170 RKRIPSQDAIAIVRNRVIANW-NIPSDFKRFKKLRVKMHFQLNQKGFVLGK-------IN 221
S+ ++++ ++ +W N+P+ + K++V + L++ G V N
Sbjct: 221 DGLPLSESETSLIKRQIERHWSNVPAGVRGNNKVKVIISITLDKAGNVEHAKVKEKICPN 280
Query: 222 VDVVGGTELVRRMLRENARKAVIKSQAFRLS-PSTYKSWRNITLFFVPSKM 271
+ V L +NA +AV ++ P+ + W+ I + F PSK+
Sbjct: 281 ITA-----SVCEALADNAIRAVWQASPIENLDPARFNHWKEINVSFDPSKL 326
>gi|326388396|ref|ZP_08209992.1| hypothetical protein Y88_3279 [Novosphingobium nitrogenifigens DSM
19370]
gi|326207128|gb|EGD57949.1| hypothetical protein Y88_3279 [Novosphingobium nitrogenifigens DSM
19370]
Length = 358
Score = 63.2 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 24/102 (23%), Positives = 43/102 (42%), Gaps = 6/102 (5%)
Query: 171 KRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTEL 230
+ + ++ V ++ +W+ P KL + + LN G + G+ V G
Sbjct: 253 GAVSTASLVSAVSRQIKPHWSAPDGV-DTDKLVTVLAWTLNPDGTLAGRPTVVSQSGITD 311
Query: 231 VRRMLR----ENARKAVIKSQAFRLSPSTYKSWRNITLF-FV 267
R E A +AV + F+L P Y +WR+++ F F
Sbjct: 312 ANRAQAQRHAELAIRAVQLAAPFKLPPQAYATWRHVSAFRFD 353
>gi|295688122|ref|YP_003591815.1| TolA protein [Caulobacter segnis ATCC 21756]
gi|295430025|gb|ADG09197.1| TolA protein [Caulobacter segnis ATCC 21756]
Length = 271
Score = 62.8 bits (151), Expect = 5e-08, Method: Composition-based stats.
Identities = 19/94 (20%), Positives = 37/94 (39%), Gaps = 1/94 (1%)
Query: 174 PSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRR 233
S A+ ++ V WN + + + V++ F + G V+G+ + V +
Sbjct: 172 LSASALGRLQGEVQDRWNPNCEVEGGANVNVRVVFVIGPGGRVVGQPESPGTSSPDPVVK 231
Query: 234 MLRENARKAVIKSQAFRLSPSTYKSWRNITLFFV 267
+ A +A+ + F PS + I L F
Sbjct: 232 AASDRAIRALFAASPFAYLPSDLYG-QKIALNFN 264
>gi|292571912|gb|ADE29827.1| Periplasmic protein TonB, links inner and outer membranes
[Rickettsia prowazekii Rp22]
Length = 320
Score = 62.4 bits (150), Expect = 6e-08, Method: Composition-based stats.
Identities = 49/254 (19%), Positives = 95/254 (37%), Gaps = 25/254 (9%)
Query: 42 DNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRS 101
D I +ED S+ K + Q + R+ E + A E +R
Sbjct: 68 DPIKHEDSKKSEQSKFKAEASQAVSQEKNAKAREIETIEEKKTIKESNTKEAKETFLERK 127
Query: 102 SSS-----KGEQALKESALLRMPVSPYDKQKISK----ATNKEQDLQGISFAEK---KSI 149
K E K+ +R P D +K+ + +K+ + K +S
Sbjct: 128 EEVAKAKLKEEWGKKQVQQVRKPEVNKDNKKLLEINKEVKHKKHKTDELDSLLKNLEQSS 187
Query: 150 DTVVVRPDKKELLSKVEKSSRKRI-------PSQDAIAIVRNRVIANW-NIPSDFKRFKK 201
+ V+ +K L KV+ + S ++++ ++ +W NIP+ + K
Sbjct: 188 EGDNVKSNKYNRLKKVDNLKEAKGVYTDMLPLSDSETSLIKRQIERHWINIPAGVRGNNK 247
Query: 202 LRVKMHFQLNQKGFVLGKINVDVVGGT---ELVRRMLRENARKAVIKSQAFRLS-PSTYK 257
+++ + LN+ G V ++ V + L +N +AV ++ P+ +
Sbjct: 248 VKIIISITLNKAGNVD-QVRVKAKICPNIQSSICEALVDNVMRAVWQASPIENLDPARFN 306
Query: 258 SWRNITLFFVPSKM 271
W+ I F PSK+
Sbjct: 307 HWKEINFIFDPSKL 320
>gi|13473206|ref|NP_104773.1| hypothetical protein mll3729 [Mesorhizobium loti MAFF303099]
gi|14023954|dbj|BAB50559.1| mll3729 [Mesorhizobium loti MAFF303099]
Length = 123
Score = 62.4 bits (150), Expect = 6e-08, Method: Composition-based stats.
Identities = 20/87 (22%), Positives = 32/87 (36%), Gaps = 9/87 (10%)
Query: 174 PSQ----DAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDV--VGG 227
PSQ + + V + + A W P V + F + G ++G V G
Sbjct: 21 PSQAAVLNTMDDVGDAIQACWTPP---ADAGNSTVTLSFSFKRDGSLIGPPRPTAAKVAG 77
Query: 228 TELVRRMLRENARKAVIKSQAFRLSPS 254
+ R+ + A AV LSP+
Sbjct: 78 DDKARKAYIDAAIAAVKNCTPLSLSPA 104
>gi|16127461|ref|NP_422025.1| hypothetical protein CC_3231 [Caulobacter crescentus CB15]
gi|221236274|ref|YP_002518711.1| TolA protein [Caulobacter crescentus NA1000]
gi|13424915|gb|AAK25193.1| hypothetical protein CC_3231 [Caulobacter crescentus CB15]
gi|220965447|gb|ACL96803.1| TolA protein [Caulobacter crescentus NA1000]
Length = 270
Score = 62.1 bits (149), Expect = 8e-08, Method: Composition-based stats.
Identities = 24/134 (17%), Positives = 45/134 (33%), Gaps = 2/134 (1%)
Query: 135 EQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRI-PSQDAIAIVRNRVIANWNIP 193
E + A K P + E + S A+ ++ V WN
Sbjct: 131 EASIAKTQKATGKPTANAPKGPARAETSVSARPAMGAATGLSAAALGRLQGEVQDRWNPN 190
Query: 194 SDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSP 253
+ + + V++ F + G V+G+ + V + + A +A+ + F P
Sbjct: 191 CEVEGGSNVNVRVVFVIGPGGRVVGQPESPGTSSPDPVVKAASDRAIRALFAASPFAYLP 250
Query: 254 STYKSWRNITLFFV 267
S + I L F
Sbjct: 251 SDLYG-QKIALNFN 263
>gi|294085865|ref|YP_003552625.1| protein TonB [Candidatus Puniceispirillum marinum IMCC1322]
gi|292665440|gb|ADE40541.1| Periplasmic protein TonB, links inner and outer membranes
[Candidatus Puniceispirillum marinum IMCC1322]
Length = 331
Score = 62.1 bits (149), Expect = 9e-08, Method: Composition-based stats.
Identities = 26/148 (17%), Positives = 50/148 (33%), Gaps = 5/148 (3%)
Query: 125 KQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRN 184
KQ +A K + + AEK + T+ K + ++R
Sbjct: 186 KQVNEEAEKKRRAQERKKAAEKVN-KTLTATTGNALKAPKAPVIAP---MGASDFDLLRA 241
Query: 185 RVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVL-GKINVDVVGGTELVRRMLRENARKAV 243
+ W++P L V + ++ G VL +I + + A++A
Sbjct: 242 HLSKCWDLPVGSAGADTLIVDIIVTSDRDGTVLSAEIKNKTRYKIDRAFKAAAAEAQRAT 301
Query: 244 IKSQAFRLSPSTYKSWRNITLFFVPSKM 271
++ L P Y W++ F P +
Sbjct: 302 LECSPLPLPPEKYDQWKSFVFAFDPRSL 329
>gi|259417935|ref|ZP_05741854.1| possible TolA protein [Silicibacter sp. TrichCH4B]
gi|259346841|gb|EEW58655.1| possible TolA protein [Silicibacter sp. TrichCH4B]
Length = 379
Score = 62.1 bits (149), Expect = 9e-08, Method: Composition-based stats.
Identities = 42/228 (18%), Positives = 78/228 (34%), Gaps = 20/228 (8%)
Query: 59 EPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRM 118
EP Q QE + D + N + ++ E E
Sbjct: 154 EPDTQISDVVQEEVAPDAGAEAN-----QPVQEATAPEAASDRIVTEAEADDAEPTAPLA 208
Query: 119 PVSPYDK------QKISKATNKEQDLQGISFAEKK-SIDTVVVRPDKKELLS---KVEKS 168
V P + Q ++ ++ + E +++ V E L+ +VE
Sbjct: 209 SVRPRTRPNRPQPQPEAETQTAAREEETTPSPEPNPEVESSAVDDALAEALAGSGEVEAP 268
Query: 169 S-RKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKG--FVLGKINVDVV 225
++ +R V WN+ S + V + L+++G + +
Sbjct: 269 EPSGPPMTRGEKDALRVAVSQCWNVGSLSSEALRTSVVVGVTLSREGMPDIGSIRMLSSS 328
Query: 226 GGTELVRRMLRENARKAVIKSQA--FRLSPSTYKSWRNITLFFVPSKM 271
GG++ + E AR+A+I+ + F L Y WR+I + F P M
Sbjct: 329 GGSDSSAKQAYEAARRAIIRCGSRGFDLPADKYAQWRDIEMTFNPEGM 376
>gi|217977105|ref|YP_002361252.1| TolA protein [Methylocella silvestris BL2]
gi|217502481|gb|ACK49890.1| TolA protein [Methylocella silvestris BL2]
Length = 394
Score = 61.7 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 37/191 (19%), Positives = 69/191 (36%), Gaps = 20/191 (10%)
Query: 84 RFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISF 143
+ ++ K ET S E A P +D IS+ NK+ Q
Sbjct: 220 KLLEEQKPKDKPQETPAKPKSGEESA--------EPTPKFDLSAISRLLNKDAPQQ--KA 269
Query: 144 AEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLR 203
A + + V +K+ + + +Q I++++ WN +K
Sbjct: 270 ATGRELQQVASLGSPTASAAKMSPT----LWAQLD-GILQDQYRHCWNFV-GLAGQQKYV 323
Query: 204 VKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPST---YKSWR 260
++H Q Q G ++G + + + R L ++A +AV + R+ Y W+
Sbjct: 324 PQIHVQYAQDGGLVGTPEL-LNPPADPNLRSLADSALRAVRRCNPLRIPAQYQPFYDQWK 382
Query: 261 NITLFFVPSKM 271
+ F P M
Sbjct: 383 GRIVRFDPEDM 393
>gi|27380359|ref|NP_771888.1| hypothetical protein bll5248 [Bradyrhizobium japonicum USDA 110]
gi|27353523|dbj|BAC50513.1| bll5248 [Bradyrhizobium japonicum USDA 110]
Length = 326
Score = 61.7 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 19/122 (15%), Positives = 44/122 (36%), Gaps = 3/122 (2%)
Query: 151 TVVVRPDKKELLSKVEKSSR-KRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQ 209
+ V P + + IA +R R+ + +P+ +R+K+
Sbjct: 202 ELPVEPKDAPRDDGGDAKDSIGAKLPPEVIAELRRRLRSCAKLPAGVAPTDPVRIKLRAV 261
Query: 210 LNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSP-STYKSWRNITLFFVP 268
G + + + + + ++A A+ Q +++ P Y+ W+ + L F P
Sbjct: 262 FATDGTL-ARPPILIEAPPSAKGVAIVKSATSALQACQPYKMLPADKYEEWKVLDLPFTP 320
Query: 269 SK 270
Sbjct: 321 QD 322
>gi|190893276|ref|YP_001979818.1| hypothetical protein RHECIAT_CH0003702 [Rhizobium etli CIAT 652]
gi|190698555|gb|ACE92640.1| hypothetical protein RHECIAT_CH0003702 [Rhizobium etli CIAT 652]
Length = 102
Score = 61.3 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 4/63 (6%)
Query: 211 NQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSP-STYKSWRNITLFF--- 266
++ ++G V GG+ R+ L A +AV++S F + P Y+SWR + L F
Sbjct: 39 DKPAAIVGSPEVTAAGGSAAARKALSAAALRAVLRSSPFTMLPKENYESWREVVLRFESG 98
Query: 267 VPS 269
P+
Sbjct: 99 DPT 101
>gi|157803960|ref|YP_001492509.1| hypothetical protein A1E_03985 [Rickettsia canadensis str. McKiel]
gi|157785223|gb|ABV73724.1| hypothetical protein A1E_03985 [Rickettsia canadensis str. McKiel]
Length = 316
Score = 60.9 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/129 (22%), Positives = 56/129 (43%), Gaps = 11/129 (8%)
Query: 154 VRPDKKELLSKVEKS-------SRKRIPSQDAIAIVRNRVIANW-NIPSDFKRFKKLRVK 205
V+ +K + KV+ + + S A+++ ++ +W NIP+ + K++V
Sbjct: 188 VKSNKHKRSKKVDNAKGAKGIYTEGLPLSDSESALIKRQIERHWSNIPAGVRGNNKVKVI 247
Query: 206 MHFQLNQKGFV--LGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLS-PSTYKSWRNI 262
+ L++ G V + T V L +NA +AV ++ P + W+ I
Sbjct: 248 ISITLDKAGNVEQVKVQEKICPNITASVCEALADNAIRAVWQASPIENLDPGRFNHWKEI 307
Query: 263 TLFFVPSKM 271
F PSK+
Sbjct: 308 NFSFDPSKL 316
>gi|220924306|ref|YP_002499608.1| protein TolA [Methylobacterium nodulans ORS 2060]
gi|219948913|gb|ACL59305.1| protein TolA [Methylobacterium nodulans ORS 2060]
Length = 472
Score = 60.9 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 21/102 (20%), Positives = 43/102 (42%), Gaps = 7/102 (6%)
Query: 171 KRIPSQDA--IAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGT 228
+ PSQ + +++ ++ ++ P + + ++ +LN G + + GG+
Sbjct: 369 RLNPSQRDALVGLLQQQIERCYSAPPG-AQQGVVLPQLDIRLNPDGSLGADPRILRAGGS 427
Query: 229 ELVRRMLRENARKAVIKSQAFRLSPS---TYKSWRNITLFFV 267
V R + E A +AV + +R+ Y WR I F
Sbjct: 428 -AVDRSIAEAAVRAVRRCAPYRIPAQFAPFYNDWRVINAEFE 468
>gi|49474672|ref|YP_032714.1| tolA protein [Bartonella quintana str. Toulouse]
gi|49240176|emb|CAF26642.1| tolA protein [Bartonella quintana str. Toulouse]
Length = 392
Score = 60.9 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 38/213 (17%), Positives = 78/213 (36%), Gaps = 21/213 (9%)
Query: 77 SVQENGDRFSDQT--KTHATENETKRSSSSKGEQALKESAL-LRMPVSPYDKQ-----KI 128
+++N + QT + E + ++AL + + ++ P K +
Sbjct: 174 EMRKNEEVTLPQTAPEAQKAPVEQVQIHQQAPQRALPKRSPFPQLKPKPAQKSVTQNAQA 233
Query: 129 SKATNKEQDLQGISFA----EKKSIDTVVVRPDKKELLSKVEKSSRKRI------PSQDA 178
+K N++ Q I EK ++ + + S+ E ++ +Q
Sbjct: 234 AKKQNQQMTRQTIEDILAMEEKNLLNRTHTQGGGAKRSSEPEALGGRKNINDITKMAQTL 293
Query: 179 IAIVRNRVIANWNIPSDFKRFKKL-RVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRE 237
I IV + + + FK V++ F L+++G +LG +D + G E + ++
Sbjct: 294 INIVGGCIQKKLKLVALGGDFKNRPVVRLRFYLDREGMILGNPIIDPLSGEENQQAIMIR 353
Query: 238 NARKAVIKSQAFRLSP-STYKSWRN-ITLFFVP 268
AV Q ++ P Y W P
Sbjct: 354 QVYAAVFSCQPYKDLPRDQYDLWGQGFDFNVDP 386
>gi|126725884|ref|ZP_01741726.1| tonB domain protein, putative [Rhodobacterales bacterium HTCC2150]
gi|126705088|gb|EBA04179.1| tonB domain protein, putative [Rhodobacterales bacterium HTCC2150]
Length = 275
Score = 60.9 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/124 (21%), Positives = 49/124 (39%), Gaps = 15/124 (12%)
Query: 152 VVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKK--LRVKMHFQ 209
+ VRP + + + S VR V WN+ S ++ + V + +
Sbjct: 154 IPVRPLGLDSM-----ETAGPPLSGVEKEGVRIAVNNCWNVGSLSSEAQQTTVVVAVSMK 208
Query: 210 LN---QKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQA--FRLSPSTYKSWRNITL 264
+ + G + V GG+ E AR+A+I+ + F L Y+ W++I +
Sbjct: 209 KDGRPKNGSIR---MVGSSGGSASAANKAYEAARRAIIRCGSKGFPLPDDKYEQWKDIEM 265
Query: 265 FFVP 268
F P
Sbjct: 266 TFEP 269
>gi|254441840|ref|ZP_05055333.1| hypothetical protein OA307_1255 [Octadecabacter antarcticus 307]
gi|198251918|gb|EDY76233.1| hypothetical protein OA307_1255 [Octadecabacter antarcticus 307]
Length = 373
Score = 60.5 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 22/107 (20%), Positives = 40/107 (37%), Gaps = 5/107 (4%)
Query: 170 RKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGF-VLGKINVDV-VGG 227
S+ + ++ WN + + + M F + G V G I +D GG
Sbjct: 264 SGGQLSEGDKSGFLRQIGNCWNTGTLSTGAQNTIIDMVFDMTPDGRPVSGSIRLDGFSGG 323
Query: 228 TELVRRMLRENARKAVIKSQA---FRLSPSTYKSWRNITLFFVPSKM 271
T + AR+A+++ + L Y W+ + L P+ M
Sbjct: 324 TATDADAAFQAARRALLRCSGDTGYDLPRDQYAQWQRVILTVDPTAM 370
>gi|146341468|ref|YP_001206516.1| hypothetical protein BRADO4560 [Bradyrhizobium sp. ORS278]
gi|146194274|emb|CAL78296.1| conserved hypothetical protein [Bradyrhizobium sp. ORS278]
Length = 288
Score = 60.5 bits (145), Expect = 3e-07, Method: Composition-based stats.
Identities = 19/101 (18%), Positives = 39/101 (38%), Gaps = 4/101 (3%)
Query: 168 SSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGG 227
S+ + + D A +R R + +P+ R + + K+ L G + +
Sbjct: 179 STATKTVAADIDAALRQRFRSCARLPAGLSRSEDIFAKVLVPLRPDGRLAAEPEFLGGPA 238
Query: 228 TELVRRM----LRENARKAVIKSQAFRLSPSTYKSWRNITL 264
+ + L + A A+ Q + L P Y+ W+ I +
Sbjct: 239 KDEEQAAKVLKLSQGAIAALTACQPYPLPPDRYEEWKVIEM 279
>gi|239947580|ref|ZP_04699333.1| periplasmic protein TonB [Rickettsia endosymbiont of Ixodes
scapularis]
gi|239921856|gb|EER21880.1| periplasmic protein TonB [Rickettsia endosymbiont of Ixodes
scapularis]
Length = 323
Score = 60.5 bits (145), Expect = 3e-07, Method: Composition-based stats.
Identities = 22/107 (20%), Positives = 47/107 (43%), Gaps = 4/107 (3%)
Query: 169 SRKRIPSQDAIAIVRNRVIANW-NIPSDFKRFKKLRVKMHFQLNQKGFVLGKI--NVDVV 225
+ + S ++++ ++ +W N+P+ + K++V + L++ G V
Sbjct: 217 TDGLLLSDSETSLIKRQIERHWSNVPAGVRGNNKVKVIISITLDKAGNVEQAKVKEKICP 276
Query: 226 GGTELVRRMLRENARKAVIKSQAFRLS-PSTYKSWRNITLFFVPSKM 271
V L +NA +AV ++ P+ + W+ I F PSK+
Sbjct: 277 NIPASVCEALADNAIRAVWQASPIENIDPARFNHWKEINFSFDPSKL 323
>gi|23009186|ref|ZP_00050329.1| hypothetical protein Magn03004129 [Magnetospirillum magnetotacticum
MS-1]
Length = 117
Score = 60.1 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 17/90 (18%), Positives = 36/90 (40%), Gaps = 2/90 (2%)
Query: 167 KSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVD--V 224
++S P D + + + A W +P RF++ + L + G V+G +
Sbjct: 4 RASEADQPPADTLKALYPALAACWKVPEGLGRFERAEITARLSLRRDGSVIGTPQITFAK 63
Query: 225 VGGTELVRRMLRENARKAVIKSQAFRLSPS 254
G R +L A+ + +++P+
Sbjct: 64 TPGDTRARDILVRATLDAIARCTPIKVTPA 93
>gi|254486526|ref|ZP_05099731.1| possible TolA protein [Roseobacter sp. GAI101]
gi|214043395|gb|EEB84033.1| possible TolA protein [Roseobacter sp. GAI101]
Length = 400
Score = 60.1 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 27/106 (25%), Positives = 44/106 (41%), Gaps = 4/106 (3%)
Query: 170 RKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGF-VLGKINVDV-VGG 227
S +R V + WN+ S V + +NQ G G I + GG
Sbjct: 292 SGPPLSAGEKESLRVAVSSCWNVGSLSSEALSTTVVVSVAMNQDGTPQNGSITMTGSSGG 351
Query: 228 TELVRRMLRENARKAVIKSQA--FRLSPSTYKSWRNITLFFVPSKM 271
++ E AR+A+I+ A ++L + W+NI + F P +M
Sbjct: 352 SQAAANQAFEAARRAIIRCGARGYQLPVDKFGQWQNIEMTFNPERM 397
>gi|83950089|ref|ZP_00958822.1| tonB domain protein, putative [Roseovarius nubinhibens ISM]
gi|83837988|gb|EAP77284.1| tonB domain protein, putative [Roseovarius nubinhibens ISM]
Length = 384
Score = 60.1 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 30/177 (16%), Positives = 59/177 (33%), Gaps = 10/177 (5%)
Query: 105 KGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEK------KSIDTVVVRPDK 158
+G + +A +R P + ++A + Q K ++ +
Sbjct: 205 EGGGPIAPTASMRPKTRPERPTQAAEAKPETQPETPKPATPKPAETDNSAVQDALAAALG 264
Query: 159 KELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGF-VL 217
+ + + + +R V + WN+ S V + + + +
Sbjct: 265 QASEPAPDTAPSGPPLTGGEKDALRVAVQSCWNVGSLSTEALGTTVVVTVDMGEDSKPIN 324
Query: 218 GKI-NVDVVGGTELVRRMLRENARKAVIKS--QAFRLSPSTYKSWRNITLFFVPSKM 271
G I + GG+ E AR+A+I+ F L Y W+ I + F P M
Sbjct: 325 GSIKMIGSSGGSAAAAGQAFEAARRAIIRCGSSGFNLPIEKYGQWKTIEMTFNPENM 381
>gi|188584275|ref|YP_001927720.1| hypothetical protein Mpop_5089 [Methylobacterium populi BJ001]
gi|179347773|gb|ACB83185.1| conserved hypothetical protein [Methylobacterium populi BJ001]
Length = 158
Score = 59.7 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 18/79 (22%), Positives = 31/79 (39%), Gaps = 2/79 (2%)
Query: 177 DAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVD--VVGGTELVRRM 234
D + + + A W +P RF++ + L + G V+G V G R +
Sbjct: 55 DTLKALYPALAACWRVPEGLSRFERAEITARLSLRRDGSVIGTPQVTFAKTPGDAKTRDI 114
Query: 235 LRENARKAVIKSQAFRLSP 253
L A+ + RL+P
Sbjct: 115 LIRATLDAIARCTPVRLTP 133
>gi|299135150|ref|ZP_07028341.1| conserved hypothetical protein [Afipia sp. 1NLS2]
gi|298590127|gb|EFI50331.1| conserved hypothetical protein [Afipia sp. 1NLS2]
Length = 274
Score = 59.7 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 18/92 (19%), Positives = 36/92 (39%), Gaps = 2/92 (2%)
Query: 179 IAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLREN 238
+A R + + +P+ R+ + L + G + + T ++ +
Sbjct: 179 VAAFRAHLKSCLKLPAGVAPTDDARIVLRVALKRDGKLARTPALMAAKAT-PKGPLIMKA 237
Query: 239 ARKAVIKSQAFRLSP-STYKSWRNITLFFVPS 269
A A+ Q + + P YK WR + L F P+
Sbjct: 238 AIHALEACQPYSMLPAEKYKEWRELDLEFTPA 269
>gi|75676902|ref|YP_319323.1| hypothetical protein Nwi_2718 [Nitrobacter winogradskyi Nb-255]
gi|74421772|gb|ABA05971.1| Cell division and transport-associated protein TolA [Nitrobacter
winogradskyi Nb-255]
Length = 350
Score = 59.7 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 16/89 (17%), Positives = 36/89 (40%), Gaps = 1/89 (1%)
Query: 183 RNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKA 242
+++V W P + +L + G + + T R+ +E+A +A
Sbjct: 263 KSQVERCWKKPYGGLEAQMTEAIFSIKLKRDGTLEATP-TAISNPTTPYFRVYQESALRA 321
Query: 243 VIKSQAFRLSPSTYKSWRNITLFFVPSKM 271
+I+ Q ++L + + W+ F K+
Sbjct: 322 IIECQPYKLPAAYFDEWKFFEPVFTERKL 350
>gi|85714381|ref|ZP_01045369.1| TolA [Nitrobacter sp. Nb-311A]
gi|85698828|gb|EAQ36697.1| TolA [Nitrobacter sp. Nb-311A]
Length = 336
Score = 59.7 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 15/89 (16%), Positives = 36/89 (40%), Gaps = 1/89 (1%)
Query: 183 RNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKA 242
+++V W P + +L + G + + + R+ +E+A +A
Sbjct: 249 KSQVERCWKKPYGGLEAQMTEAVFSIKLKRDGTLETTP-TAISNPSTPYFRVYQESALRA 307
Query: 243 VIKSQAFRLSPSTYKSWRNITLFFVPSKM 271
+I+ Q ++L + + W+ F K+
Sbjct: 308 IIECQPYKLPAAYFDEWKFFEPVFTERKL 336
>gi|115524210|ref|YP_781121.1| hypothetical protein RPE_2199 [Rhodopseudomonas palustris BisA53]
gi|115518157|gb|ABJ06141.1| conserved hypothetical protein [Rhodopseudomonas palustris BisA53]
Length = 289
Score = 59.7 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 21/98 (21%), Positives = 39/98 (39%), Gaps = 2/98 (2%)
Query: 174 PSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRR 233
++ +R V + +P R K+R+ M L +G + + +
Sbjct: 190 IAKSDTERLRAHVRSCSTLPGSVARTDKVRIVMRIALTPQGRLAAPPAL-IEASASAKGP 248
Query: 234 MLRENARKAVIKSQAFRLSP-STYKSWRNITLFFVPSK 270
L + A KA+ Q + + P Y+ WR + L F P+
Sbjct: 249 ALMQAAIKALEACQPYAMLPADKYREWRVLDLGFTPAD 286
>gi|170747179|ref|YP_001753439.1| protein TolA [Methylobacterium radiotolerans JCM 2831]
gi|170653701|gb|ACB22756.1| protein TolA [Methylobacterium radiotolerans JCM 2831]
Length = 450
Score = 59.4 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 15/102 (14%), Positives = 38/102 (37%), Gaps = 11/102 (10%)
Query: 174 PSQDAIAIVRN----RVIANWNIPSDFKRFKKLRVKM-HFQLNQKGFVLGKINVDVVGGT 228
S + ++ ++ P + + + + +LN G + + + + GG
Sbjct: 348 LSPSLRDALVGLLQQQIERCYSAPPGA--AQGVVLPVLDIRLNPNGSLSTEPRI-MRGGA 404
Query: 229 ELVRRMLRENARKAVIKSQAFRLSPS---TYKSWRNITLFFV 267
V + + + A +AV + + + + Y W+ I F
Sbjct: 405 SAVDQSIAQAALRAVRRCAPYNIPATYAPYYNDWKAINAEFE 446
>gi|206602337|gb|EDZ38818.1| Probable TonB family protein [Leptospirillum sp. Group II '5-way
CG']
Length = 278
Score = 59.4 bits (142), Expect = 6e-07, Method: Composition-based stats.
Identities = 34/178 (19%), Positives = 60/178 (33%), Gaps = 29/178 (16%)
Query: 108 QALKESALL----RMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVR-------- 155
Q +K++ + R P+ ++K+ L+ +K + + VR
Sbjct: 92 QVVKKAPIPIVRKRTPIRKIHQKKVIAPPKMVHRLKKKKTPHRKVVASHPVRVKTAKASP 151
Query: 156 -PDKKELLSK---------VEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVK 205
P K L V+ ++ +R+ +NW P + LR
Sbjct: 152 VPQKPVLHPSRVSNPHPVPVKMDISGETFPTFLEHLLISRIKSNWFPPPG---TRGLRAT 208
Query: 206 MHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPSTYKSWRNIT 263
+ F L + G V + V G M + AR AV++S F P Y +
Sbjct: 209 IQFTLLKDGRVSDQPVVIGSSGNG----MFDDAARMAVLRSVPFPPFPPGYSKDQETV 262
>gi|91978078|ref|YP_570737.1| hypothetical protein RPD_3613 [Rhodopseudomonas palustris BisB5]
gi|91684534|gb|ABE40836.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB5]
Length = 304
Score = 59.0 bits (141), Expect = 6e-07, Method: Composition-based stats.
Identities = 19/98 (19%), Positives = 40/98 (40%), Gaps = 2/98 (2%)
Query: 174 PSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRR 233
S +A+A +R R+ + +P+ +++ + L G + + V +
Sbjct: 204 ISAEAVAALRQRLKSCAALPASVAPSDNVKIVLRVALQPDGRLAQEP-VLIEASASAKGP 262
Query: 234 MLRENARKAVIKSQAFRLSP-STYKSWRNITLFFVPSK 270
L + A ++ Q + + P YK W+ + L F P
Sbjct: 263 ALMKGAIDSLTACQPYTMLPVEKYKEWKVLDLGFTPQD 300
>gi|218516343|ref|ZP_03513183.1| putative signal peptide protein [Rhizobium etli 8C-3]
Length = 129
Score = 59.0 bits (141), Expect = 8e-07, Method: Composition-based stats.
Identities = 17/87 (19%), Positives = 39/87 (44%), Gaps = 2/87 (2%)
Query: 153 VVRPDKKELLSKVEKSSRKRIP--SQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQL 210
P + ++S P S + +R+ + + + + K +R+ +H +L
Sbjct: 25 PAFPFDANAEAADRRNSDANSPRISVAEVQALRDAIERQYFVDNRLKDIDSVRLTIHIKL 84
Query: 211 NQKGFVLGKINVDVVGGTELVRRMLRE 237
+ G ++G +V V GG+E ++ L +
Sbjct: 85 ARDGQIVGNPDVQVTGGSERAQKSLTD 111
>gi|13235475|emb|CAC33634.1| hypothetical protein [Rickettsia montanensis]
Length = 323
Score = 58.6 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 21/107 (19%), Positives = 46/107 (42%), Gaps = 4/107 (3%)
Query: 169 SRKRIPSQDAIAIVRNRVIANW-NIPSDFKRFKKLRVKMHFQLNQKGFV--LGKINVDVV 225
+ S ++++ ++ +W N+P+ + K++V + L++ G V +
Sbjct: 217 TDGLPLSDSETSLIKRQIERHWSNVPAGVRGNNKVKVIISITLDKAGNVEQVKVNEKICP 276
Query: 226 GGTELVRRMLRENARKAVIKSQAFRLS-PSTYKSWRNITLFFVPSKM 271
V L +NA +AV ++ + + W+ I F PSK+
Sbjct: 277 NIPASVCEALADNAIRAVWQASPIENLDSARFNHWKEINFSFDPSKL 323
>gi|94496182|ref|ZP_01302760.1| hypothetical protein SKA58_03690 [Sphingomonas sp. SKA58]
gi|94424361|gb|EAT09384.1| hypothetical protein SKA58_03690 [Sphingomonas sp. SKA58]
Length = 321
Score = 58.6 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 20/91 (21%), Positives = 38/91 (41%), Gaps = 7/91 (7%)
Query: 176 QDAIAI-VRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVD----VVGGTEL 230
+ A+ +R ++ +W PS +L + +L++ G ++G V V
Sbjct: 219 KSALDAEIRRQLKPHWRPPSG-ADADQLVTLLEVRLDKSGALVGTPQVIDQLGVTASNRP 277
Query: 231 VRRMLRENARKAVIKSQAF-RLSPSTYKSWR 260
++ E A +AV + F L P Y W+
Sbjct: 278 QAKLHAERAIQAVKLAAPFRNLPPEFYDQWK 308
>gi|157964387|ref|YP_001499211.1| periplasmic protein TonB [Rickettsia massiliae MTU5]
gi|157844163|gb|ABV84664.1| Periplasmic protein TonB [Rickettsia massiliae MTU5]
Length = 328
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 21/107 (19%), Positives = 45/107 (42%), Gaps = 4/107 (3%)
Query: 169 SRKRIPSQDAIAIVRNRVIANW-NIPSDFKRFKKLRVKMHFQLNQKGFVLGKI--NVDVV 225
+ S ++++ ++ +W N+P+ + K++V + L++ G V
Sbjct: 222 TDGLPLSDSETSLIKRQIERHWSNVPAGVRGNNKVKVIISITLDKAGNVEQAKVNEKICP 281
Query: 226 GGTELVRRMLRENARKAVIKSQAFRLS-PSTYKSWRNITLFFVPSKM 271
V L +NA +AV ++ + + W+ I F PSK+
Sbjct: 282 NIPASVCEALADNAIRAVWQASPIENLDSARFNHWKEINFSFDPSKL 328
>gi|153007828|ref|YP_001369043.1| hypothetical protein Oant_0483 [Ochrobactrum anthropi ATCC 49188]
gi|151559716|gb|ABS13214.1| hypothetical protein Oant_0483 [Ochrobactrum anthropi ATCC 49188]
Length = 122
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 20/80 (25%), Positives = 33/80 (41%), Gaps = 5/80 (6%)
Query: 177 DAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDV--VGGTELVRRM 234
+ VR+ + A W+ SD K V + F + G + G V G + R+
Sbjct: 28 TTMNEVRDALNACWSPLSDSKNSS---VTLRFSFKRDGNLKGPPCASAINVQGDDKTRKA 84
Query: 235 LRENARKAVIKSQAFRLSPS 254
A +AV + +L+PS
Sbjct: 85 FVIAAIEAVERCTPLKLAPS 104
>gi|188584486|ref|YP_001927931.1| protein TolA [Methylobacterium populi BJ001]
gi|179347984|gb|ACB83396.1| protein TolA [Methylobacterium populi BJ001]
Length = 458
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/163 (14%), Positives = 57/163 (34%), Gaps = 16/163 (9%)
Query: 111 KESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSR 170
++ A L SP D ++ + Q +++ + + L
Sbjct: 306 RQQAELANKFSPGDIRQTLASKAASQSTGSTGREVQRTASLGAATGNAQRLSP------- 358
Query: 171 KRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKM-HFQLNQKGFVLGKINVDVVGGTE 229
+ +++ ++ ++ P + + + M +LN G + + V + G
Sbjct: 359 --SLRDALVGMLQQQIERCYSAPPGAT--QGVVLPMLDIRLNPDGSLTAEPRV-MRAGNN 413
Query: 230 LVRRMLRENARKAVIKSQAFRLSPS---TYKSWRNITLFFVPS 269
V + + + A +AV + +++ Y W+ I F S
Sbjct: 414 SVDQSIAQAALRAVRRCAPYKIPAQYAPYYNDWKAINAEFEFS 456
>gi|86748934|ref|YP_485430.1| putative TolA [Rhodopseudomonas palustris HaA2]
gi|86571962|gb|ABD06519.1| putative TolA [Rhodopseudomonas palustris HaA2]
Length = 320
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 16/84 (19%), Positives = 37/84 (44%), Gaps = 1/84 (1%)
Query: 183 RNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKA 242
+++V W P ++ +L + G + + T R+ +E+A +A
Sbjct: 233 QSQVERCWKKPYGGIEAQRAEAAFVIRLKRDGTLESMPQPEGHPAT-PYLRVYQESALRA 291
Query: 243 VIKSQAFRLSPSTYKSWRNITLFF 266
+I+ Q ++L P+ ++ W+ F
Sbjct: 292 IIECQPYKLPPAFFEEWKYFAPVF 315
>gi|209884913|ref|YP_002288770.1| hypothetical protein OCAR_5779 [Oligotropha carboxidovorans OM5]
gi|209873109|gb|ACI92905.1| conserved hypothetical protein [Oligotropha carboxidovorans OM5]
Length = 262
Score = 57.8 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 18/97 (18%), Positives = 37/97 (38%), Gaps = 2/97 (2%)
Query: 174 PSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRR 233
+D +A R + + +P+ R+ + L G + + +
Sbjct: 162 LKKDIVAAFRAHLKSCLKLPAGVAPTDNARIVLRVALKPDGRLAATPAL-MEAKASPKGP 220
Query: 234 MLRENARKAVIKSQAFRLSP-STYKSWRNITLFFVPS 269
++ + A A+ Q + + P YK WR + L F P+
Sbjct: 221 LIMKAAIHALEACQPYGMLPADKYKEWRQLDLEFTPA 257
>gi|239831246|ref|ZP_04679575.1| Hypothetical protein OINT_1000427 [Ochrobactrum intermedium LMG
3301]
gi|239823513|gb|EEQ95081.1| Hypothetical protein OINT_1000427 [Ochrobactrum intermedium LMG
3301]
Length = 120
Score = 57.8 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/101 (21%), Positives = 41/101 (40%), Gaps = 7/101 (6%)
Query: 158 KKELLSKVEKSSRKRIPSQD--AIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGF 215
K L + V ++ + +Q+ + V + + A W P+ K V + F + G
Sbjct: 5 KFCLWATVTFATAGSVQAQELRTMDDVGSALNACWTAPAGSKNSA---VTLSFSFKRNGS 61
Query: 216 VLGKINVDV--VGGTELVRRMLRENARKAVIKSQAFRLSPS 254
++G V G + ++ A AV K +L+PS
Sbjct: 62 LMGPPRPSAINVQGDDKAKKAFVNAAIDAVEKCTPLKLAPS 102
>gi|58696706|ref|ZP_00372254.1| conserved hypothetical protein [Wolbachia endosymbiont of
Drosophila simulans]
gi|225630038|ref|YP_002726829.1| hypothetical protein WRi_002060 [Wolbachia sp. wRi]
gi|58537118|gb|EAL60232.1| conserved hypothetical protein [Wolbachia endosymbiont of
Drosophila simulans]
gi|225592019|gb|ACN95038.1| hypothetical protein WRi_002060 [Wolbachia sp. wRi]
Length = 206
Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/127 (22%), Positives = 56/127 (44%), Gaps = 6/127 (4%)
Query: 146 KKSIDTVV---VRPDKKELLSKVEKSSRKRIPSQDAI-AIVRNRVIANWNIPSDFKRFKK 201
KKS++ + VR K E+ ++ S+K I +R ++ W+IP +
Sbjct: 78 KKSVEKKLRRDVRGAKNEIGNEKSVESKKDELVVTEIINSIREKLTKCWSIPESIAYKEN 137
Query: 202 LRVKMHFQLNQKGFVL-GKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPSTYKS-W 259
+K++ L+ +G ++ + + R + +NA +AV K P+ + W
Sbjct: 138 FNIKINLLLSSQGEIIMADVADSDSYRNNPLFRSIADNAMRAVYKCSPLTGLPTQHHHIW 197
Query: 260 RNITLFF 266
R +TL F
Sbjct: 198 REVTLDF 204
>gi|89053464|ref|YP_508915.1| hypothetical protein Jann_0973 [Jannaschia sp. CCS1]
gi|88863013|gb|ABD53890.1| hypothetical protein Jann_0973 [Jannaschia sp. CCS1]
Length = 171
Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/111 (23%), Positives = 48/111 (43%), Gaps = 9/111 (8%)
Query: 162 LSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGK-I 220
L +VE R I +Q + + A W + + ++ + + + + F +G V+ + I
Sbjct: 60 LPQVETPDRAAIGAQ-----IAEAIEACWTVSNLSEQARGVSIVVAFDTIPEGEVVRESI 114
Query: 221 NVDV-VGGTELVRRMLRENARKAVIKSQ--AFRLSPSTYKSWRNITLFFVP 268
+ GGT++ A +A+ + L P TY W+ I L F P
Sbjct: 115 EMTGFSGGTQVAADEAMAAAVRAITRCANDGLDLPPETYPVWQRIELTFDP 165
>gi|319406261|emb|CBI79898.1| TolA protein [Bartonella sp. AR 15-3]
Length = 377
Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 33/190 (17%), Positives = 69/190 (36%), Gaps = 7/190 (3%)
Query: 83 DRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGIS 142
++ ++ T T + S E+ +K S + SP ++ + ++ I+
Sbjct: 185 EKPNELTPTVMLPDNIPFPSFKPKEKPIKPSNFEKTQKSPSKGKQTIEDILAMEETHLIN 244
Query: 143 FAEKKSI-DTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKK 201
A + +P+ + S++K +Q + IV + + +
Sbjct: 245 RARTQGGGAKRSHKPEALGARKNIGDSAKK---AQTLVNIVGTCIQQKLKLVAIGGNLSN 301
Query: 202 L-RVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSP-STYKSW 259
V++ F+LN G V+G+ +D + G E ++ + AV Q + P Y W
Sbjct: 302 RPVVRLQFRLNNNGNVIGEPKIDPLKGEESQLTIMTQQVYAAVFSCQPYENLPRDQYNLW 361
Query: 260 RN-ITLFFVP 268
P
Sbjct: 362 GQGFDFNVDP 371
>gi|148284675|ref|YP_001248765.1| hypothetical protein OTBS_1221 [Orientia tsutsugamushi str.
Boryong]
gi|146740114|emb|CAM80287.1| hypothetical protein OTBS_1221 [Orientia tsutsugamushi str.
Boryong]
Length = 407
Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 32/225 (14%), Positives = 81/225 (36%), Gaps = 10/225 (4%)
Query: 56 KIEEPVVQFKGSSQENLVRDF------SVQENGDRFSDQT-KTHATENETKRSSSSKGEQ 108
K+ EP +Q Q+ + S + + D T ++ E++T + ++
Sbjct: 183 KVTEPPLQSGSIEQKASSTSYIPEKIASAPQATPKVIDPTLQSPPIEHKTNVPTITESSA 242
Query: 109 ALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKS--IDTVVVRPDKKELLSKVE 166
+ + + ++ P I T+ +K+ + + V + +
Sbjct: 243 STTQPIIPKVIDPPLKSSHIEDKTSVAHTTDIRHSITQKNNLVTSNVAAEQQYIANNHAS 302
Query: 167 KSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVG 226
+ + S ++ ++ A+WN F + ++ L+ + I+ +
Sbjct: 303 RQNTNNTNSTSYTDAIKYQIQAHWNHTIGFIPGISTVLMVNLTLDGTIENITDISHNCPN 362
Query: 227 GTELVRRMLRENARKAVIKSQAFRLSP-STYKSWRNITLFFVPSK 270
V + +N ++A+ + F+ P Y +W+ + L F P
Sbjct: 363 SNTTVCNVFIQNVKRAIWAASPFQELPKEEYNAWQQLVLEFNPED 407
>gi|218532908|ref|YP_002423724.1| hypothetical protein Mchl_5031 [Methylobacterium chloromethanicum
CM4]
gi|240141421|ref|YP_002965901.1| hypothetical protein MexAM1_META1p5020 [Methylobacterium extorquens
AM1]
gi|254563936|ref|YP_003071031.1| hypothetical protein METDI5621 [Methylobacterium extorquens DM4]
gi|218525211|gb|ACK85796.1| conserved hypothetical protein [Methylobacterium chloromethanicum
CM4]
gi|240011398|gb|ACS42624.1| hypothetical protein MexAM1_META1p5020 [Methylobacterium extorquens
AM1]
gi|254271214|emb|CAX27226.1| hypothetical protein METDI5621 [Methylobacterium extorquens DM4]
Length = 148
Score = 57.0 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 17/85 (20%), Positives = 33/85 (38%), Gaps = 7/85 (8%)
Query: 177 DAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVD-------VVGGTE 229
D + + + A W P RF+++ + L + G V+G + G
Sbjct: 40 DTLKALYPALAACWKAPEGLSRFERVEITARLSLRRDGSVIGMPQITFAKTPFANTPGDT 99
Query: 230 LVRRMLRENARKAVIKSQAFRLSPS 254
R +L R A+ + R++P+
Sbjct: 100 RARDILIRATRDAIARCTPVRVTPA 124
>gi|163853967|ref|YP_001642010.1| hypothetical protein Mext_4571 [Methylobacterium extorquens PA1]
gi|163665572|gb|ABY32939.1| hypothetical protein Mext_4571 [Methylobacterium extorquens PA1]
Length = 147
Score = 57.0 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 17/85 (20%), Positives = 33/85 (38%), Gaps = 7/85 (8%)
Query: 177 DAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVD-------VVGGTE 229
D + + + A W P RF+++ + L + G V+G + G
Sbjct: 39 DTLKALYPALAACWKAPEGLSRFERVEITARLSLRRDGSVIGMPQITFAKTPFANTPGDT 98
Query: 230 LVRRMLRENARKAVIKSQAFRLSPS 254
R +L R A+ + R++P+
Sbjct: 99 RARDILIRATRDAIARCTPVRVTPA 123
>gi|254564125|ref|YP_003071220.1| TolA-TolQ-TolR complex membrane anchored protein [Methylobacterium
extorquens DM4]
gi|254271403|emb|CAX27416.1| membrane anchored protein in TolA-TolQ-TolR complex, tolerance
protein to group A colicins, required for OM integrity
[Methylobacterium extorquens DM4]
Length = 471
Score = 57.0 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 17/95 (17%), Positives = 40/95 (42%), Gaps = 7/95 (7%)
Query: 179 IAIVRNRVIANWNIPSDFKRFKKLRVKM-HFQLNQKGFVLGKINVDVVGGTELVRRMLRE 237
+ +++ ++ ++ P + + + M +LN G + + V + G V + + +
Sbjct: 378 VGMLQQQIERCYSAPPGAT--QGVVLPMLDIRLNPDGSLTTEPRV-MRAGNNSVDQSIAQ 434
Query: 238 NARKAVIKSQAFRLSPS---TYKSWRNITLFFVPS 269
A +AV + F++ Y W+ I F S
Sbjct: 435 AALRAVRRCAPFKIPAQYAPYYNDWKAINAEFEFS 469
>gi|218528281|ref|YP_002419097.1| hypothetical protein Mchl_0228 [Methylobacterium chloromethanicum
CM4]
gi|218520584|gb|ACK81169.1| conserved hypothetical protein [Methylobacterium chloromethanicum
CM4]
Length = 148
Score = 57.0 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 21/108 (19%), Positives = 45/108 (41%), Gaps = 5/108 (4%)
Query: 149 IDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHF 208
I VV S + ++ P+ + A +R + + W +P + ++ F
Sbjct: 9 IALAVVLGGASAAPSTLARAQTASSPAVNNWADLRAALASCWTVP---ADTEGSQIAFRF 65
Query: 209 QLNQKGFVLGKINVDV--VGGTELVRRMLRENARKAVIKSQAFRLSPS 254
LN+ G + G V + G + R+ + A +A+ + R++P+
Sbjct: 66 GLNKTGGMRGPPLVTSRQLKGDQEARKRFEDGAFEALSRCFPMRITPA 113
>gi|85715470|ref|ZP_01046451.1| hypothetical protein NB311A_17234 [Nitrobacter sp. Nb-311A]
gi|85697665|gb|EAQ35541.1| hypothetical protein NB311A_17234 [Nitrobacter sp. Nb-311A]
Length = 227
Score = 57.0 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 17/101 (16%), Positives = 33/101 (32%), Gaps = 2/101 (1%)
Query: 171 KRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTEL 230
+ S A R +P+ +R+ + G + + +
Sbjct: 124 RADISAMDTAQFRRHFKTCSKMPASVSPSDNIRIVLRVPFTIDGTIAAPPAL-IEASASA 182
Query: 231 VRRMLRENARKAVIKSQAFRL-SPSTYKSWRNITLFFVPSK 270
L + A KA++ Q + + P Y W+ + L F P
Sbjct: 183 KGLALMKGAIKALMACQPYAMFPPDKYDQWKVLDLSFTPRD 223
>gi|58698232|ref|ZP_00373152.1| conserved hypothetical protein [Wolbachia endosymbiont of
Drosophila ananassae]
gi|58535259|gb|EAL59338.1| conserved hypothetical protein [Wolbachia endosymbiont of
Drosophila ananassae]
Length = 189
Score = 57.0 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 29/127 (22%), Positives = 56/127 (44%), Gaps = 6/127 (4%)
Query: 146 KKSIDTVV---VRPDKKELLSKVEKSSRKRIPSQDAI-AIVRNRVIANWNIPSDFKRFKK 201
KKS++ + VR K E+ ++ S+K I +R ++ W+IP +
Sbjct: 61 KKSVEKKLRRDVRGAKNEIGNEKSVESKKDELVVTEIINSIREKLTKCWSIPESIAYKEN 120
Query: 202 LRVKMHFQLNQKGFVL-GKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPSTYKS-W 259
+K++ L+ +G ++ + + R + +NA +AV K P+ + W
Sbjct: 121 FNIKINLLLSSQGEIIMADVADSDSYRNNPLFRSIADNAMRAVYKCSPLTGLPTQHHHIW 180
Query: 260 RNITLFF 266
R +TL F
Sbjct: 181 REVTLDF 187
>gi|240141616|ref|YP_002966096.1| tolerance protein to group A colicins, single-stranded filamentous
DNA phage, required for OM integrity [Methylobacterium
extorquens AM1]
gi|240011593|gb|ACS42819.1| tolerance protein to group A colicins, single-stranded filamentous
DNA phage, required for OM integrity [Methylobacterium
extorquens AM1]
Length = 466
Score = 57.0 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 17/95 (17%), Positives = 40/95 (42%), Gaps = 7/95 (7%)
Query: 179 IAIVRNRVIANWNIPSDFKRFKKLRVKM-HFQLNQKGFVLGKINVDVVGGTELVRRMLRE 237
+ +++ ++ ++ P + + + M +LN G + + V + G V + + +
Sbjct: 373 VGMLQQQIERCYSAPPGAT--QGVVLPMLDIRLNPDGSLTTEPRV-MRAGNNSVDQSIAQ 429
Query: 238 NARKAVIKSQAFRLSPS---TYKSWRNITLFFVPS 269
A +AV + F++ Y W+ I F S
Sbjct: 430 AALRAVRRCAPFKIPAQYAPYYNDWKAINAEFEFS 464
>gi|163854157|ref|YP_001642200.1| protein TolA [Methylobacterium extorquens PA1]
gi|163665762|gb|ABY33129.1| protein TolA [Methylobacterium extorquens PA1]
Length = 471
Score = 57.0 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 17/95 (17%), Positives = 40/95 (42%), Gaps = 7/95 (7%)
Query: 179 IAIVRNRVIANWNIPSDFKRFKKLRVKM-HFQLNQKGFVLGKINVDVVGGTELVRRMLRE 237
+ +++ ++ ++ P + + + M +LN G + + V + G V + + +
Sbjct: 378 VGMLQQQIERCYSAPPGAT--QGVVLPMLDIRLNPDGSLTTEPRV-MRAGNNSVDQSIAQ 434
Query: 238 NARKAVIKSQAFRLSPS---TYKSWRNITLFFVPS 269
A +AV + F++ Y W+ I F S
Sbjct: 435 AALRAVRRCAPFKIPAQYAPYYNDWKAINAEFEFS 469
>gi|225677304|ref|ZP_03788283.1| hypothetical protein WUni_008080 [Wolbachia endosymbiont of
Muscidifurax uniraptor]
gi|225590667|gb|EEH11915.1| hypothetical protein WUni_008080 [Wolbachia endosymbiont of
Muscidifurax uniraptor]
Length = 206
Score = 57.0 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 29/127 (22%), Positives = 57/127 (44%), Gaps = 6/127 (4%)
Query: 146 KKSIDTVV---VRPDKKELLSKVEKSSRKRIPSQDAI-AIVRNRVIANWNIPSDFKRFKK 201
KKS++ + VR K E+ ++ S+K I +R+++ W+IP +
Sbjct: 78 KKSVEKKLRRDVRGAKNEIGNEKSVESKKDELVVTEIINSIRDKLTKCWSIPESIAYKEN 137
Query: 202 LRVKMHFQLNQKGFVL-GKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPSTYKS-W 259
+K++ L+ +G ++ + + R + +NA +AV K P+ + W
Sbjct: 138 FNIKINLLLSSQGEIIMADVADSDSYRNNPLFRSIADNAMRAVYKCSPLTGLPTQHHHIW 197
Query: 260 RNITLFF 266
R +TL F
Sbjct: 198 REVTLDF 204
>gi|218533102|ref|YP_002423918.1| protein TolA [Methylobacterium chloromethanicum CM4]
gi|218525405|gb|ACK85990.1| protein TolA [Methylobacterium chloromethanicum CM4]
Length = 471
Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 17/95 (17%), Positives = 40/95 (42%), Gaps = 7/95 (7%)
Query: 179 IAIVRNRVIANWNIPSDFKRFKKLRVKM-HFQLNQKGFVLGKINVDVVGGTELVRRMLRE 237
+ +++ ++ ++ P + + + M +LN G + + V + G V + + +
Sbjct: 378 VGMLQQQIERCYSAPPGAT--QGVVLPMLDIRLNPDGSLTTEPRV-MRAGNNSVDQSIAQ 434
Query: 238 NARKAVIKSQAFRLSPS---TYKSWRNITLFFVPS 269
A +AV + F++ Y W+ I F S
Sbjct: 435 AALRAVRRCAPFKIPAQYAPYYNDWKAINAEFEFS 469
>gi|42520110|ref|NP_966025.1| hypothetical protein WD0214 [Wolbachia endosymbiont of Drosophila
melanogaster]
gi|99035998|ref|ZP_01315039.1| hypothetical protein Wendoof_01000110 [Wolbachia endosymbiont of
Drosophila willistoni TSC#14030-0811.24]
gi|42409847|gb|AAS13959.1| hypothetical protein WD_0214 [Wolbachia endosymbiont of Drosophila
melanogaster]
Length = 189
Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 29/127 (22%), Positives = 57/127 (44%), Gaps = 6/127 (4%)
Query: 146 KKSIDTVV---VRPDKKELLSKVEKSSRKRIPSQDAI-AIVRNRVIANWNIPSDFKRFKK 201
KKS++ + VR K E+ ++ S+K I +R+++ W+IP +
Sbjct: 61 KKSVEKKLRRDVRGAKNEIGNEKSVESKKDELVVTEIINSIRDKLTKCWSIPESIAYKEN 120
Query: 202 LRVKMHFQLNQKGFVL-GKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPSTYKS-W 259
+K++ L+ +G ++ + + R + +NA +AV K P+ + W
Sbjct: 121 FNIKINLLLSSQGEIIMADVADSDSYRNNPLFRSIADNAMRAVYKCSPLTGLPTQHHHIW 180
Query: 260 RNITLFF 266
R +TL F
Sbjct: 181 REVTLDF 187
>gi|103485824|ref|YP_615385.1| hypothetical protein Sala_0329 [Sphingopyxis alaskensis RB2256]
gi|98975901|gb|ABF52052.1| hypothetical protein Sala_0329 [Sphingopyxis alaskensis RB2256]
Length = 273
Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 6/91 (6%)
Query: 181 IVRNRVIANWNI--PSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLR-- 236
++ V WN S +L+ + F+L Q G + G +V G + R +
Sbjct: 181 SIKAAVAPRWNSCRVSGV-DVDQLKTIVKFRLTQSGALAGFTSVTTTGENDSNRFQIERH 239
Query: 237 -ENARKAVIKSQAFRLSPSTYKSWRNITLFF 266
E A++AV + F L Y W+N TL F
Sbjct: 240 QECAKRAVELAAPFDLPEENYSFWQNYTLDF 270
>gi|316932663|ref|YP_004107645.1| putative TolA [Rhodopseudomonas palustris DX-1]
gi|315600377|gb|ADU42912.1| putative TolA [Rhodopseudomonas palustris DX-1]
Length = 332
Score = 56.7 bits (135), Expect = 4e-06, Method: Composition-based stats.
Identities = 14/78 (17%), Positives = 32/78 (41%), Gaps = 1/78 (1%)
Query: 183 RNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKA 242
+++V W P ++ +L + G + + T R+ +E+A +A
Sbjct: 245 QSQVERCWKKPYGGIEAQRAEAAFVIRLKRDGSLEAMPQPEGHPAT-PYLRVYQESALRA 303
Query: 243 VIKSQAFRLSPSTYKSWR 260
+I+ Q + L + W+
Sbjct: 304 IIECQPYNLPAQFFDEWK 321
>gi|90424736|ref|YP_533106.1| hypothetical protein RPC_3245 [Rhodopseudomonas palustris BisB18]
gi|90106750|gb|ABD88787.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB18]
Length = 267
Score = 56.7 bits (135), Expect = 4e-06, Method: Composition-based stats.
Identities = 17/95 (17%), Positives = 36/95 (37%), Gaps = 2/95 (2%)
Query: 177 DAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLR 236
+R + +P K+R+ + L +G + + + + +L
Sbjct: 171 SDTDKLRAHLRNCAALPGAVAPTDKVRIVIRIALTPEGRLASPPAL-IEASASMKGPLLM 229
Query: 237 ENARKAVIKSQAFRLSP-STYKSWRNITLFFVPSK 270
+ A KA+ Q + + P Y+ WR + + F P
Sbjct: 230 QAAIKALQDCQPYAMLPAEKYQEWRVLDIGFTPKD 264
>gi|39934194|ref|NP_946470.1| putative TolA [Rhodopseudomonas palustris CGA009]
gi|192289720|ref|YP_001990325.1| protein TolA [Rhodopseudomonas palustris TIE-1]
gi|39648042|emb|CAE26562.1| putative TolA [Rhodopseudomonas palustris CGA009]
gi|192283469|gb|ACE99849.1| protein TolA [Rhodopseudomonas palustris TIE-1]
Length = 327
Score = 56.3 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 14/78 (17%), Positives = 32/78 (41%), Gaps = 1/78 (1%)
Query: 183 RNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKA 242
+++V W P ++ +L + G + + T R+ +E+A +A
Sbjct: 240 QSQVERCWKKPYGGIEAQRAEASFVIRLKRDGTLETLPQPEGHPAT-PYLRVYQESALRA 298
Query: 243 VIKSQAFRLSPSTYKSWR 260
+I+ Q + L + W+
Sbjct: 299 IIECQPYNLPAQFFDEWK 316
>gi|91978609|ref|YP_571268.1| putative TolA [Rhodopseudomonas palustris BisB5]
gi|91685065|gb|ABE41367.1| putative TolA [Rhodopseudomonas palustris BisB5]
Length = 325
Score = 56.3 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 14/78 (17%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
Query: 183 RNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKA 242
+++V W P ++ +L + G + + T R+ +E+A +A
Sbjct: 238 QSQVERCWKKPYGGIEAQRAEAAFVIRLKRDGSLESMPQPEGHPAT-PYLRVYQESALRA 296
Query: 243 VIKSQAFRLSPSTYKSWR 260
+I+ Q + L + + W+
Sbjct: 297 IIECQPYNLPAAFFDEWK 314
>gi|182677269|ref|YP_001831415.1| TolA protein [Beijerinckia indica subsp. indica ATCC 9039]
gi|182633152|gb|ACB93926.1| TolA protein [Beijerinckia indica subsp. indica ATCC 9039]
Length = 436
Score = 56.3 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 36/191 (18%), Positives = 76/191 (39%), Gaps = 17/191 (8%)
Query: 84 RFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISF 143
+ +QT ETK+ + +K Q K + S ++ ISK + E S
Sbjct: 259 KLLEQTPAKT---ETKK-AEAKPAQRPKSGSEAATEPSKFNAADISKLLSAEAPQHKAST 314
Query: 144 AEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLR 203
K++ +K+ S R+ S I++++ W+ +K
Sbjct: 315 G--KTVQQTASLGLPNANAAKMSPSMWDRLDS-----ILQDQYKQCWSFIG--LNKQKYV 365
Query: 204 VKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPS---TYKSWR 260
++H Q + G ++G+ ++ + ++ R L ++A +AV + ++ Y W+
Sbjct: 366 PEIHVQYAEDGSLIGQPSL-LNPPSDPQLRGLADSAMRAVRRCNPLKIPAQYQPYYDQWK 424
Query: 261 NITLFFVPSKM 271
+ F P +M
Sbjct: 425 GRIVRFDPEEM 435
>gi|319404774|emb|CBI78375.1| TolA protein [Bartonella rochalimae ATCC BAA-1498]
Length = 383
Score = 56.3 bits (134), Expect = 5e-06, Method: Composition-based stats.
Identities = 37/185 (20%), Positives = 66/185 (35%), Gaps = 5/185 (2%)
Query: 87 DQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEK 146
+ T T + S E+ + S L + SP ++ + + Q I+ A
Sbjct: 195 ESTPTMTLPDTIPVPSFKPKEKPVDSSHLQKAQKSPPKGEQTIEDILAMEKTQLINRA-- 252
Query: 147 KSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPS-DFKRFKKLRVK 205
K+ R +K E L + +Q + IV + + + K + V+
Sbjct: 253 KTQGGGAKRSNKPEALGAQKNIGDSEKKAQTLVNIVGTCIQQKLKLVAIGGKLNNRPVVR 312
Query: 206 MHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSP-STYKSWRN-IT 263
+ F LN G V+G+ +D + G E ++ + AV Q + P Y W
Sbjct: 313 LQFYLNNNGNVIGEPKIDPLKGEESQLAIMTQQVYAAVFSCQPYENLPRDQYNLWGQGFD 372
Query: 264 LFFVP 268
P
Sbjct: 373 FNVDP 377
>gi|238651139|ref|YP_002916614.1| tonB/tolA protein [Rickettsia peacockii str. Rustic]
gi|238625237|gb|ACR47943.1| tonB/tolA protein [Rickettsia peacockii str. Rustic]
Length = 323
Score = 56.3 bits (134), Expect = 5e-06, Method: Composition-based stats.
Identities = 29/162 (17%), Positives = 65/162 (40%), Gaps = 21/162 (12%)
Query: 126 QKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSR-------KRIPSQDA 178
+ + K K +L + ++S + V+ +K + K + + S
Sbjct: 167 KDVKKKEPKTDELDSLLKHLEQSSEGDNVKSNKHQRSKKADNAQEAKGVYTDGLPLSDSE 226
Query: 179 IAIVRNRVIANW-NIPSDFKRFKKLRVKMHFQLNQKGFVLGK-------INVDVVGGTEL 230
++++ ++ +W N+P+ + K++V + L++ G V N+
Sbjct: 227 TSLIKRQIERHWSNVPAGVRGNNKVKVIISITLDKAGNVEQAKVNKKICPNI-----PAS 281
Query: 231 VRRMLRENARKAVIKSQAFRLS-PSTYKSWRNITLFFVPSKM 271
V L +NA +AV ++ + + W+ I F PSK+
Sbjct: 282 VCEALADNAIRAVWQASPIENLDSARFNHWKEINFSFDPSKL 323
>gi|254419795|ref|ZP_05033519.1| hypothetical protein BBAL3_2105 [Brevundimonas sp. BAL3]
gi|196185972|gb|EDX80948.1| hypothetical protein BBAL3_2105 [Brevundimonas sp. BAL3]
Length = 276
Score = 55.9 bits (133), Expect = 5e-06, Method: Composition-based stats.
Identities = 19/103 (18%), Positives = 41/103 (39%), Gaps = 5/103 (4%)
Query: 153 VVRPDKKELLSKVEKSSRKRIPSQD---AIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQ 209
RP+ + SQ + + N+V NW +P D +LR+++
Sbjct: 155 PTRPNNNRGRPATGQQGSG-TASQATGPQVTAIFNQVYPNWVLPCDIPGADQLRIQVELT 213
Query: 210 LNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLS 252
L+ G + ++ + + V R + A +A+ ++ F +
Sbjct: 214 LSADGRITRGPSL-INPQSSSVYRAAADGALRALRQTAPFDVP 255
>gi|163869132|ref|YP_001610371.1| TolA protein [Bartonella tribocorum CIP 105476]
gi|161018818|emb|CAK02376.1| TolA protein [Bartonella tribocorum CIP 105476]
Length = 498
Score = 55.9 bits (133), Expect = 6e-06, Method: Composition-based stats.
Identities = 32/156 (20%), Positives = 58/156 (37%), Gaps = 13/156 (8%)
Query: 126 QKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKS-----SRKRI-----PS 175
QK+SK K Q+ Q I + ++ R + +K + +RK I +
Sbjct: 338 QKMSKLNKKNQEKQTIEDILAMEENNLLNRARSQGGGAKRSHTPEALGARKNIHDTTKMA 397
Query: 176 QDAIAIVRNRVIANWNIPSDFKRFKKL-RVKMHFQLNQKGFVLGKINVDVVGGTELVRRM 234
Q + I + + + K V++ F L+++G V+G ++ V G E + +
Sbjct: 398 QTLVNIAGGCIQQKLKLVALGGDLKNRPVVRLRFYLDREGMVMGDPIIEPVSGLESQQAI 457
Query: 235 LRENARKAVIKSQAFRLSP-STYKSWRN-ITLFFVP 268
+ AV Q + P Y W P
Sbjct: 458 MIRQVYAAVFSCQPYADLPRDQYGLWGQGFDFNVDP 493
>gi|92117313|ref|YP_577042.1| hypothetical protein Nham_1768 [Nitrobacter hamburgensis X14]
gi|91800207|gb|ABE62582.1| conserved hypothetical protein [Nitrobacter hamburgensis X14]
Length = 142
Score = 55.9 bits (133), Expect = 6e-06, Method: Composition-based stats.
Identities = 17/95 (17%), Positives = 38/95 (40%), Gaps = 4/95 (4%)
Query: 177 DAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINV--DVVGGTELVRRM 234
+A + R+ W P+ + + + + F + G +LG+ + + G T+ R +
Sbjct: 28 ANLAAMSARLKRCWQPPALPRGNPGMEITVQFTFRRDGSLLGRPRITYETSGATDEERII 87
Query: 235 LRENARKAVIKSQ--AFRLSPSTYKSWRNITLFFV 267
R +A+ + F + R +T+ F
Sbjct: 88 YRTAVMQALQRCAPMPFTHGMGDAIAGRPLTIRFD 122
>gi|240851220|ref|YP_002972623.1| TolA protein [Bartonella grahamii as4aup]
gi|240268343|gb|ACS51931.1| TolA protein [Bartonella grahamii as4aup]
Length = 498
Score = 55.5 bits (132), Expect = 7e-06, Method: Composition-based stats.
Identities = 27/168 (16%), Positives = 62/168 (36%), Gaps = 18/168 (10%)
Query: 116 LRMPVSPYDKQ--KISKATNKEQDLQGISFAEKKSI----------DTVVVRPDKKELLS 163
R + +++ K++K ++Q ++ I E+ ++ P+
Sbjct: 329 PRKNAAALNQKTPKLNKKNQEKQTIEDILALEENNLLNRARSQGGGAKRSHTPEALGARK 388
Query: 164 KVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKL-RVKMHFQLNQKGFVLGKINV 222
++ +++ +Q + I + + + K V++ F L+++G V+G +
Sbjct: 389 NIDDTTK---MAQTLVNIAGGCIQQKLKLVALGGDLKNRPVVRLRFYLDREGMVMGDPII 445
Query: 223 DVVGGTELVRRMLRENARKAVIKSQAFRLSP-STYKSWRN-ITLFFVP 268
D V G E + ++ AV Q + P Y W P
Sbjct: 446 DPVSGLESQQAIMIRQVYAAVFSCQPYADLPRDQYDLWGQGFDFNVDP 493
>gi|92118973|ref|YP_578702.1| putative TolA [Nitrobacter hamburgensis X14]
gi|91801867|gb|ABE64242.1| Cell division and transport-associated protein TolA [Nitrobacter
hamburgensis X14]
Length = 314
Score = 55.5 bits (132), Expect = 7e-06, Method: Composition-based stats.
Identities = 16/86 (18%), Positives = 33/86 (38%), Gaps = 5/86 (5%)
Query: 183 RNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKA 242
+ +V W P + +L + G + + + R+ +E+A +A
Sbjct: 227 KTQVERCWKKPYGGLEAQMTEAIFSIKLKRDGTLETTP-TAISNPSTPYFRVYQESALRA 285
Query: 243 VIKSQAFRLSPSTYKSWRNITLFFVP 268
+I+ Q + L + W+ FF P
Sbjct: 286 IIECQPYNLPAQFFDEWK----FFEP 307
>gi|27382264|ref|NP_773793.1| hypothetical protein bll7153 [Bradyrhizobium japonicum USDA 110]
gi|27355435|dbj|BAC52418.1| bll7153 [Bradyrhizobium japonicum USDA 110]
Length = 319
Score = 55.5 bits (132), Expect = 7e-06, Method: Composition-based stats.
Identities = 24/185 (12%), Positives = 61/185 (32%), Gaps = 8/185 (4%)
Query: 95 ENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVV 154
+ K ++ ++ L+ PV + K ++ ++ +D
Sbjct: 134 PDPAKEDPIAELQKKLETKKPPPKPVEQKVAAVQPQQQPKPKERSFDPAQIQRDLDKRAA 193
Query: 155 RPDKKELLSKVEKSSRKRIPSQDA------IAIVRNRVIANWNIPSDFKRFKKLRVKMHF 208
+ + +S A + V + + + + +
Sbjct: 194 TRHELAGTALNASASLGSTTGTAANNVATWRGAFQGAVKRCFTPTYNGQDADQYEADIDI 253
Query: 209 QLNQKGFVLGKINVDVVGGTE-LVRRMLRENARKAVIKSQAFRLSP-STYKSWRNITLFF 266
+ G + + V V G + + + E+A++A+++ Q + P Y+SW+ I + F
Sbjct: 254 PMKIDGSLASEPIVVAVRGPSRSIAQAVAESAKRAIVQCQVYSFMPKQQYESWKLIPMTF 313
Query: 267 VPSKM 271
M
Sbjct: 314 GLKDM 318
>gi|197106552|ref|YP_002131929.1| hypothetical protein PHZ_c3091 [Phenylobacterium zucineum HLK1]
gi|196479972|gb|ACG79500.1| conserved hypothetical protein [Phenylobacterium zucineum HLK1]
Length = 264
Score = 55.5 bits (132), Expect = 8e-06, Method: Composition-based stats.
Identities = 21/116 (18%), Positives = 47/116 (40%), Gaps = 2/116 (1%)
Query: 156 PDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGF 215
P + E ++ + + + + + + WN + + + V++ F + G
Sbjct: 145 PSRAETAPDARNTAGRGLAAGADMQGLVQELQRRWNPNCTVEGGRDVIVRVVFNIGSGGQ 204
Query: 216 VLGKINVDVVGGT-ELVRRMLRENARKAVIKSQAFRLSPSTYKSWRNITLFFVPSK 270
++G++ + GG + V + E A +AV + FR Y R I + F +
Sbjct: 205 LVGQVTSQITGGPRDAVGQAAAERAERAVYAASPFRGLSRDYYGQR-IAVNFNARE 259
>gi|229586573|ref|YP_002845074.1| Periplasmic protein TonB, links inner and outer membranes
[Rickettsia africae ESF-5]
gi|228021623|gb|ACP53331.1| Periplasmic protein TonB, links inner and outer membranes
[Rickettsia africae ESF-5]
Length = 323
Score = 55.5 bits (132), Expect = 8e-06, Method: Composition-based stats.
Identities = 28/162 (17%), Positives = 65/162 (40%), Gaps = 21/162 (12%)
Query: 126 QKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSR-------KRIPSQDA 178
+ + K K +L + ++S + V+ +K + K + + S
Sbjct: 167 KDVKKKEPKTDELDSLLKHLEQSSEGDNVKSNKHQRSKKADNAQEAKGVYTDGLPLSDSE 226
Query: 179 IAIVRNRVIANW-NIPSDFKRFKKLRVKMHFQLNQKGFVLGK-------INVDVVGGTEL 230
++++ ++ +W N+P+ + K++V + L++ G V N+
Sbjct: 227 TSLIKRQIERHWSNVPAGVRGNNKVKVIISITLDKAGNVEQAKVNKKICPNI-----PAS 281
Query: 231 VRRMLRENARKAVIKSQAFRLS-PSTYKSWRNITLFFVPSKM 271
V L +NA +AV ++ + + W+ + F PSK+
Sbjct: 282 VCEALADNAIRAVWQASPIENLDSARFNHWKEMNFSFDPSKL 323
>gi|92117950|ref|YP_577679.1| hypothetical protein Nham_2429 [Nitrobacter hamburgensis X14]
gi|91800844|gb|ABE63219.1| conserved hypothetical protein [Nitrobacter hamburgensis X14]
Length = 287
Score = 55.5 bits (132), Expect = 8e-06, Method: Composition-based stats.
Identities = 15/89 (16%), Positives = 30/89 (33%), Gaps = 2/89 (2%)
Query: 183 RNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKA 242
R + +P+ +R+ + G + + + L + A A
Sbjct: 196 RRHLKTCSKMPASVSPGDNIRIVLRVPFTTDGKIAAPPAL-IEASASAKGPALMKGAIAA 254
Query: 243 VIKSQAFR-LSPSTYKSWRNITLFFVPSK 270
++ Q + L P Y W+ + L F P
Sbjct: 255 LVACQPYAMLPPDKYDEWKVLDLSFTPRD 283
>gi|146338268|ref|YP_001203316.1| putative TonB protein [Bradyrhizobium sp. ORS278]
gi|146191074|emb|CAL75079.1| Putative TonB protein [Bradyrhizobium sp. ORS278]
Length = 333
Score = 55.5 bits (132), Expect = 9e-06, Method: Composition-based stats.
Identities = 23/102 (22%), Positives = 40/102 (39%), Gaps = 5/102 (4%)
Query: 170 RKRIPSQDAIAIVRNR----VIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVV 225
R S+ +A ++ V +N P + + + L G V V V
Sbjct: 220 SSRGMSEANLASLQGAFSAAVKRCYNFPYNGPDADQFWADVDINLQPDGSVASMSIVKVG 279
Query: 226 GGTELVRRMLRENARKAVIKSQAFRLSP-STYKSWRNITLFF 266
G + V + EN ++A ++ QA+ P Y W+ I + F
Sbjct: 280 GPSRSVANAIAENGKRATLQCQAYSFLPKQQYALWKMIPMRF 321
>gi|170742581|ref|YP_001771236.1| hypothetical protein M446_4461 [Methylobacterium sp. 4-46]
gi|168196855|gb|ACA18802.1| hypothetical protein M446_4461 [Methylobacterium sp. 4-46]
Length = 161
Score = 55.1 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 23/105 (21%), Positives = 38/105 (36%), Gaps = 14/105 (13%)
Query: 150 DTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQ 209
TV V D+ L+S + + + + A W+ P R +V +
Sbjct: 46 ATVRVPVDRAALVSPADTLVQ-----------LYPALAACWDPPPGLGRG---QVTLRLS 91
Query: 210 LNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPS 254
L + G + G V RR L E A++AV L+ +
Sbjct: 92 LTRDGRLAGVPRVTFASLPPERRRPLVEAAQRAVRACTPVALTAA 136
>gi|319407738|emb|CBI81385.1| TolA protein [Bartonella sp. 1-1C]
Length = 381
Score = 55.1 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 35/185 (18%), Positives = 66/185 (35%), Gaps = 5/185 (2%)
Query: 87 DQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEK 146
+ T T + S E+ + S L ++ SP ++ + + Q I+
Sbjct: 193 ESTPTMTLPDTIPIPSFKPKEKPVDPSHLQKVQKSPPKGEQTIEDILAMEKTQLIN--RT 250
Query: 147 KSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPS-DFKRFKKLRVK 205
K+ R +K E L + +Q + IV + + + + + V+
Sbjct: 251 KTQGGGAKRSNKPEALGAQKNIGDSEKKAQTLVNIVGTCIQQKLKLVAIGGRLNNRPVVR 310
Query: 206 MHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSP-STYKSWRN-IT 263
+ F LN G V+G+ +D + G E ++ + AV Q + P Y W
Sbjct: 311 LQFYLNNNGNVIGEPKIDPLKGEESQLAIMTQQVYAAVFSCQPYENLPRDQYNLWGQGFD 370
Query: 264 LFFVP 268
P
Sbjct: 371 FNVDP 375
>gi|157828299|ref|YP_001494541.1| periplasmic protein TonB [Rickettsia rickettsii str. 'Sheila
Smith']
gi|165933003|ref|YP_001649792.1| TolA [Rickettsia rickettsii str. Iowa]
gi|13235466|emb|CAC33701.1| hypothetical protein [Rickettsia rickettsii]
gi|157800780|gb|ABV76033.1| Periplasmic protein TonB [Rickettsia rickettsii str. 'Sheila
Smith']
gi|165908090|gb|ABY72386.1| TolA [Rickettsia rickettsii str. Iowa]
Length = 323
Score = 55.1 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 22/112 (19%), Positives = 47/112 (41%), Gaps = 14/112 (12%)
Query: 169 SRKRIPSQDAIAIVRNRVIANW-NIPSDFKRFKKLRVKMHFQLNQKGFVLGK-------I 220
+ S ++++ ++ +W N+P+ + K++V + L++ G V
Sbjct: 217 TDGLPLSDSDTSLIKRQIERHWSNVPAGVRGNNKVKVIISITLDKAGNVEQAKVNKKICP 276
Query: 221 NVDVVGGTELVRRMLRENARKAVIKSQAFRLS-PSTYKSWRNITLFFVPSKM 271
N+ V L +NA +AV ++ + + W+ I F PSK+
Sbjct: 277 NI-----PASVCEALADNAIRAVWQASPIENLDSARFNHWKEINFSFDPSKL 323
>gi|87199038|ref|YP_496295.1| hypothetical protein Saro_1016 [Novosphingobium aromaticivorans DSM
12444]
gi|87134719|gb|ABD25461.1| Cell division and transport-associated protein TolA
[Novosphingobium aromaticivorans DSM 12444]
Length = 293
Score = 54.7 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/135 (20%), Positives = 45/135 (33%), Gaps = 18/135 (13%)
Query: 138 LQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFK 197
L+GI A + P + +V+ S + ++ +W P
Sbjct: 167 LKGIPGATRPGTAK---TPPAAAIGPEVKSSLAG---------AISRQIKPHWAAPQGV- 213
Query: 198 RFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLR----ENARKAVIKSQAFRLSP 253
KL + + LN+ G + G+ V G E A +AV + F L
Sbjct: 214 DADKLVTILAWDLNEDGSLAGRPRVVRQEGITPANEAQAKRHAEQAIRAVQLAAPFELPA 273
Query: 254 STYKSWRNITLF-FV 267
Y W+ + F F
Sbjct: 274 MYYSGWKRVAAFRFD 288
>gi|294013405|ref|YP_003546865.1| putative TolA [Sphingobium japonicum UT26S]
gi|292676735|dbj|BAI98253.1| putative TolA [Sphingobium japonicum UT26S]
Length = 304
Score = 54.7 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 20/81 (24%), Positives = 38/81 (46%), Gaps = 6/81 (7%)
Query: 185 RVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRR----MLRENAR 240
++ N+PS + L + +L++ G V+G V V G R + +E A
Sbjct: 212 QIYRYLNLPSG-ADVELLVAFLDVKLDRNGRVIGTPEVIDVQGINASNRPQVSIYKERAV 270
Query: 241 KAVIKSQAFRLSP-STYKSWR 260
+AV+++ F+ P Y+ W+
Sbjct: 271 QAVLRASPFKGLPTEYYEQWK 291
>gi|87198417|ref|YP_495674.1| hypothetical protein Saro_0392 [Novosphingobium aromaticivorans DSM
12444]
gi|87134098|gb|ABD24840.1| Cell division and transport-associated protein TolA
[Novosphingobium aromaticivorans DSM 12444]
Length = 368
Score = 54.4 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 19/92 (20%), Positives = 37/92 (40%), Gaps = 6/92 (6%)
Query: 176 QDAI-AIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRM 234
Q A+ + ++ +W +P + + L + + LN+ G + G V G R
Sbjct: 267 QSALAGSISRQLKPHWVVPQGVE-TEALVTVLSWSLNRDGSLAGSPQVVRQEGITDANRA 325
Query: 235 LR----ENARKAVIKSQAFRLSPSTYKSWRNI 262
E A +AV + F L + +W+ +
Sbjct: 326 QAARHAEQAIRAVQLAAPFNLPAEYHDAWKRV 357
>gi|163852773|ref|YP_001640816.1| hypothetical protein Mext_3359 [Methylobacterium extorquens PA1]
gi|163664378|gb|ABY31745.1| conserved hypothetical protein [Methylobacterium extorquens PA1]
Length = 148
Score = 54.4 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 18/90 (20%), Positives = 40/90 (44%), Gaps = 5/90 (5%)
Query: 167 KSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDV-- 224
++ P+ + A +R + + W +P + ++ F LN+ G + G V
Sbjct: 27 RAQTASSPAINNWAGLRAALTSCWTVP---ADTEGSQIAFRFGLNKTGGMRGPPLVTSRQ 83
Query: 225 VGGTELVRRMLRENARKAVIKSQAFRLSPS 254
+ G + R+ E A +A+ + R++P+
Sbjct: 84 LKGDQEARKRFEEAAFEALSRCFPMRITPA 113
>gi|190570799|ref|YP_001975157.1| hypothetical protein WPa_0360 [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|190357071|emb|CAQ54468.1| hypothetical protein WP0360 [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
Length = 203
Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 33/137 (24%), Positives = 57/137 (41%), Gaps = 11/137 (8%)
Query: 139 QGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIV-------RNRVIANWN 191
+GI ++K +R D KE+ K E +K I ++D V R+++ W
Sbjct: 58 EGIPIPKRKKGVERKLREDIKEV--KNEIRDKKNIENKDDELAVTEIINSIRDKLTECWR 115
Query: 192 IPSDFKRFKKLRVKMHFQLNQKGFVL-GKINVDVVGGTELVRRMLRENARKAVIKSQAF- 249
IP + +K++ L+ KG ++ + + R +NA +AV K
Sbjct: 116 IPESIVYKENFSIKINLLLSSKGEIVVANVADSSSYQNNPLFRSAADNAMRAVYKCSPLI 175
Query: 250 RLSPSTYKSWRNITLFF 266
L + WR +TL F
Sbjct: 176 GLPAEQHHIWREVTLDF 192
>gi|319409338|emb|CBI82982.1| TolA protein [Bartonella schoenbuchensis R1]
Length = 373
Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 16/68 (23%), Positives = 29/68 (42%), Gaps = 2/68 (2%)
Query: 203 RVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAF-RLSPSTYKSWRN 261
V++ FQLN+ G ++G ++ + G E + ++ + AV Q + L Y W
Sbjct: 300 VVRLQFQLNRNGMIIGTPIIEPLKGDESQQAVMVQQVYAAVFACQPYPDLPRDQYNLWGQ 359
Query: 262 -ITLFFVP 268
P
Sbjct: 360 GFDFNVDP 367
>gi|49476142|ref|YP_034183.1| tolA protein [Bartonella henselae str. Houston-1]
gi|49238950|emb|CAF28248.1| tolA protein [Bartonella henselae str. Houston-1]
Length = 385
Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 15/68 (22%), Positives = 28/68 (41%), Gaps = 2/68 (2%)
Query: 203 RVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSP-STYKSWRN 261
V++ F LN++G ++G +D + G + + ++ AV Q + P Y W
Sbjct: 312 VVRLRFYLNREGMIMGDPIIDPLSGEQSQQAIMIRQVYAAVFSCQPYTDLPRDQYDLWGQ 371
Query: 262 -ITLFFVP 268
P
Sbjct: 372 GFDFNVDP 379
>gi|213019674|ref|ZP_03335479.1| hypothetical protein C1A_1167 [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
gi|212994715|gb|EEB55358.1| hypothetical protein C1A_1167 [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
Length = 182
Score = 53.6 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 33/137 (24%), Positives = 57/137 (41%), Gaps = 11/137 (8%)
Query: 139 QGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIV-------RNRVIANWN 191
+GI ++K +R D KE+ K E +K I ++D V R+++ W
Sbjct: 37 EGIPIPKRKKGVERKLREDIKEV--KNEIRDKKNIENKDDELAVTEIINSIRDKLTECWR 94
Query: 192 IPSDFKRFKKLRVKMHFQLNQKGFVL-GKINVDVVGGTELVRRMLRENARKAVIKSQAF- 249
IP + +K++ L+ KG ++ + + R +NA +AV K
Sbjct: 95 IPESIVYKENFSIKINLLLSSKGEIVVANVADSSSYQNNPLFRSAADNAMRAVYKCSPLI 154
Query: 250 RLSPSTYKSWRNITLFF 266
L + WR +TL F
Sbjct: 155 GLPAEQHHIWREVTLDF 171
>gi|319781143|ref|YP_004140619.1| hypothetical protein Mesci_1409 [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317167031|gb|ADV10569.1| hypothetical protein Mesci_1409 [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 122
Score = 53.6 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 13/79 (16%), Positives = 25/79 (31%), Gaps = 5/79 (6%)
Query: 177 DAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDV--VGGTELVRRM 234
+ + V + A W P+ V + F + G ++G V G ++
Sbjct: 28 NTMDDVGAAIQACWTPPAGAGTAS---VTLSFSFKRDGTLIGPPRPTAIKVEGDAKAKKS 84
Query: 235 LRENARKAVIKSQAFRLSP 253
+ A A+ S
Sbjct: 85 FVDAATTALQNCLPLTFSA 103
>gi|254450211|ref|ZP_05063648.1| possible TolA protein [Octadecabacter antarcticus 238]
gi|198264617|gb|EDY88887.1| possible TolA protein [Octadecabacter antarcticus 238]
Length = 355
Score = 53.6 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 19/107 (17%), Positives = 37/107 (34%), Gaps = 5/107 (4%)
Query: 170 RKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGF-VLGKINVDV-VGG 227
S+ ++ WN + + + M F + G V + +D GG
Sbjct: 246 SGGQLSEGDKTGFLRQIGNCWNTGTLSTGAQNTIIDMVFDMTPDGRPVAASVRLDNFSGG 305
Query: 228 TELVRRMLRENARKAVIKSQA---FRLSPSTYKSWRNITLFFVPSKM 271
+ AR+A+++ + L Y W+ + L P+ M
Sbjct: 306 NAADADAALQTARRALLRCSGDTGYDLPRDQYAQWQRVILTVDPTAM 352
>gi|163853213|ref|YP_001641256.1| hypothetical protein Mext_3811 [Methylobacterium extorquens PA1]
gi|163664818|gb|ABY32185.1| conserved hypothetical protein [Methylobacterium extorquens PA1]
Length = 157
Score = 53.6 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 21/108 (19%), Positives = 45/108 (41%), Gaps = 5/108 (4%)
Query: 149 IDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHF 208
I V+ S + + +P+ + A +R + + W +P + ++ F
Sbjct: 18 IALAVILCGASAAPSTLASAQTVSLPAVNNWAELRAALASCWTVP---ADTEGSQIAFRF 74
Query: 209 QLNQKGFVLGKINVDV--VGGTELVRRMLRENARKAVIKSQAFRLSPS 254
LN+ G + G V + G + R+ E A +A+ + R++P+
Sbjct: 75 GLNKTGGMRGPPLVTSRQLKGDQEARKRFEEAAFEALSRCFPMRITPA 122
>gi|260461543|ref|ZP_05809790.1| conserved hypothetical protein [Mesorhizobium opportunistum
WSM2075]
gi|259032613|gb|EEW33877.1| conserved hypothetical protein [Mesorhizobium opportunistum
WSM2075]
Length = 130
Score = 53.6 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 16/79 (20%), Positives = 25/79 (31%), Gaps = 5/79 (6%)
Query: 177 DAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDV--VGGTELVRRM 234
+ +A V + A W P V + F + G ++G V G R+
Sbjct: 28 NTMADVGAAIQACWTPP---ADAGNSTVTLSFSFKRDGTLIGPPRATAVKVAGDYKARQA 84
Query: 235 LRENARKAVIKSQAFRLSP 253
+ A AV S
Sbjct: 85 FIDAATAAVKNCTPLTFSA 103
>gi|83859801|ref|ZP_00953321.1| TolA protein [Oceanicaulis alexandrii HTCC2633]
gi|83852160|gb|EAP90014.1| TolA protein [Oceanicaulis alexandrii HTCC2633]
Length = 275
Score = 53.6 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 23/136 (16%), Positives = 45/136 (33%), Gaps = 5/136 (3%)
Query: 137 DLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDF 196
DL +S +S D + E + + + A+ + + +D
Sbjct: 137 DLNALSQLVDRSRDN-AAPQGQAETGEQRNRVGAGTDMTASLQAMAASHMNRCIRSNADA 195
Query: 197 KRFKKLRVKMHFQLNQKGFVLGKI----NVDVVGGTELVRRMLRENARKAVIKSQAFRLS 252
LRV + +L + G + ++ R+ E A + I+ Q + L
Sbjct: 196 PANMDLRVSLEIRLERNGRLSVPPRLIDEARIMNSPNSFLRVAGERALRGAIECQPYPLP 255
Query: 253 PSTYKSWRNITLFFVP 268
P Y WR + +
Sbjct: 256 PEHYAQWRVLRVNVDT 271
>gi|85710725|ref|ZP_01041789.1| hypothetical protein NAP1_09947 [Erythrobacter sp. NAP1]
gi|85687903|gb|EAQ27908.1| hypothetical protein NAP1_09947 [Erythrobacter sp. NAP1]
Length = 269
Score = 53.2 bits (126), Expect = 4e-05, Method: Composition-based stats.
Identities = 22/110 (20%), Positives = 41/110 (37%), Gaps = 10/110 (9%)
Query: 167 KSSRKRIPSQDAIAIVRNRVIA----NWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINV 222
S+ + A + + + +WN PS + + L + +QLN+ G + G+
Sbjct: 158 TSAPAAAFGRAERAALASAITRQLRPHWNAPSGVE-AELLESVVTWQLNEDGSLKGRPRC 216
Query: 223 -----DVVGGTELVRRMLRENARKAVIKSQAFRLSPSTYKSWRNITLFFV 267
V + E A +AV + F L Y W+++ F
Sbjct: 217 RNVSSSVTDSNRPQAGLHCERAIRAVQLAAPFNLPEQFYNRWKDLEWEFN 266
>gi|148256133|ref|YP_001240718.1| hypothetical protein BBta_4788 [Bradyrhizobium sp. BTAi1]
gi|146408306|gb|ABQ36812.1| hypothetical protein BBta_4788 [Bradyrhizobium sp. BTAi1]
Length = 294
Score = 53.2 bits (126), Expect = 4e-05, Method: Composition-based stats.
Identities = 19/103 (18%), Positives = 44/103 (42%), Gaps = 2/103 (1%)
Query: 169 SRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGT 228
+ + D +A+ R + + +P+ + VK+ + G + + + G
Sbjct: 190 TATTNLADDLVAVFRRHLKSCARLPATVSPADNVMVKLRVAMTPDGRLAAEPLLIA-GTA 248
Query: 229 ELVRRMLRENARKAVIKSQAFRLSP-STYKSWRNITLFFVPSK 270
+ L+++A +A+ Q + + P S Y+ W+ + L F P
Sbjct: 249 SVKALQLKQSAMEALAACQPYAMLPSSRYREWKVLELSFSPQD 291
>gi|240140618|ref|YP_002965098.1| hypothetical protein MexAM1_META1p4179 [Methylobacterium extorquens
AM1]
gi|240010595|gb|ACS41821.1| hypothetical protein MexAM1_META1p4179 [Methylobacterium extorquens
AM1]
Length = 148
Score = 52.8 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 20/108 (18%), Positives = 43/108 (39%), Gaps = 5/108 (4%)
Query: 149 IDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHF 208
I V+ S + + P+ + A +R + + W +P + ++ F
Sbjct: 9 IALAVILGGASAASSTLAWAQTASSPAVNNWAELRAALASCWTVP---ADTEGSQIAFRF 65
Query: 209 QLNQKGFVLGKINVDV--VGGTELVRRMLRENARKAVIKSQAFRLSPS 254
LN+ G + G V + G + R+ + A A+ + R++P+
Sbjct: 66 GLNKTGGMRGPPLVTSRQLKGDQEARKRFEDAAFAALSRCFPMRITPA 113
>gi|150395577|ref|YP_001326044.1| hypothetical protein Smed_0351 [Sinorhizobium medicae WSM419]
gi|150027092|gb|ABR59209.1| conserved hypothetical protein [Sinorhizobium medicae WSM419]
Length = 146
Score = 52.4 bits (124), Expect = 7e-05, Method: Composition-based stats.
Identities = 14/75 (18%), Positives = 24/75 (32%), Gaps = 5/75 (6%)
Query: 178 AIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDV--VGGTELVRRML 235
+ + + W P+ FK V + F G ++G V G E R+
Sbjct: 53 TVDDLGAALSRCWTPPAGFKDS---FVTLRFGFRGDGTLMGPPRPTAIRVSGDEKQRQAF 109
Query: 236 RENARKAVIKSQAFR 250
A +A+
Sbjct: 110 VAAATEALQNCVPLE 124
>gi|114798960|ref|YP_758887.1| hypothetical protein HNE_0153 [Hyphomonas neptunium ATCC 15444]
gi|114739134|gb|ABI77259.1| conserved hypothetical protein [Hyphomonas neptunium ATCC 15444]
Length = 307
Score = 52.0 bits (123), Expect = 8e-05, Method: Composition-based stats.
Identities = 24/140 (17%), Positives = 50/140 (35%), Gaps = 4/140 (2%)
Query: 135 EQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPS 194
E LQ +E++ RP + + + + A +R +++ W
Sbjct: 167 ESTLQSKRASEQRPETQQTDRPVLANSDRDQQGAGERTGATASLQAALRRQIMECWTGVD 226
Query: 195 DFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLR-ENARKAVIKSQA---FR 250
D ++ V + +L + G + + + R + + A AV K +R
Sbjct: 227 DLPPEHQIDVVVSVKLARDGSLAEAAKLISPRSRPVGRSGIAVDRALLAVRKCGEIGNYR 286
Query: 251 LSPSTYKSWRNITLFFVPSK 270
L Y W++I + P +
Sbjct: 287 LPAEDYDLWKDINVTLGPKQ 306
>gi|218510317|ref|ZP_03508195.1| outer membrane protein [Rhizobium etli Brasil 5]
Length = 31
Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 11/29 (37%), Positives = 13/29 (44%), Gaps = 1/29 (3%)
Query: 244 IKSQAFRLSP-STYKSWRNITLFFVPSKM 271
+KS F P Y +W L F PS M
Sbjct: 1 MKSAPFTTLPKDKYDAWNEFDLNFDPSSM 29
>gi|170738784|ref|YP_001767439.1| hypothetical protein M446_0439 [Methylobacterium sp. 4-46]
gi|168193058|gb|ACA15005.1| conserved hypothetical protein [Methylobacterium sp. 4-46]
Length = 151
Score = 51.3 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 31/75 (41%), Gaps = 5/75 (6%)
Query: 182 VRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVV--GGTELVRRMLRENA 239
+R + A W IPS + + F L++ G + G+ V G + A
Sbjct: 34 MRAALAACWTIPSGTEGS---LIAFRFGLDKTGAMRGQPLVTARRFKGDRGAAEHFEDAA 90
Query: 240 RKAVIKSQAFRLSPS 254
R A+ + R++PS
Sbjct: 91 RAALARCFPMRVTPS 105
>gi|251772668|gb|EES53232.1| TonB family protein [Leptospirillum ferrodiazotrophum]
Length = 269
Score = 50.5 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/147 (17%), Positives = 54/147 (36%), Gaps = 15/147 (10%)
Query: 125 KQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRN 184
K ++ ++ Q+ K ++ V + V ++ +
Sbjct: 133 KARVIPVKSQHQEHHKTPPPSKAALAPV-------ANPAPVHMDLAGNQFPTYLQHLLIS 185
Query: 185 RVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVI 244
R+ +NW P L V + F L + G + G + G+ R+ + AR A++
Sbjct: 186 RIKSNWAPPPG---SHGLYVTIRFTLLKDGQISGDPVLMTASGS----RVFDDAARYAIL 238
Query: 245 KSQAFRLSPSTYKSWRN-ITLFFVPSK 270
+S F P +Y + +T+ +K
Sbjct: 239 RSVPFPPFPPSYGKEKESVTVTLQATK 265
>gi|85716505|ref|ZP_01047476.1| hypothetical protein NB311A_06171 [Nitrobacter sp. Nb-311A]
gi|85696694|gb|EAQ34581.1| hypothetical protein NB311A_06171 [Nitrobacter sp. Nb-311A]
Length = 139
Score = 50.5 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 17/95 (17%), Positives = 38/95 (40%), Gaps = 4/95 (4%)
Query: 177 DAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVV--GGTELVRRM 234
+A++ R+ W P+ + + + + F + G +LG+ + G T+ R +
Sbjct: 30 ANLAMMSARLKRCWQPPALPRGSPGMEITVLFTFKRDGSLLGRPRITSETRGITDEERLI 89
Query: 235 LRENARKAVIKSQ--AFRLSPSTYKSWRNITLFFV 267
R +A+ + F S + +T+ F
Sbjct: 90 YRTAVMEALQRCSPMPFTSSMGEAIAGHPMTIRFD 124
>gi|46201442|ref|ZP_00208103.1| hypothetical protein Magn03009721 [Magnetospirillum magnetotacticum
MS-1]
Length = 250
Score = 50.5 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 31/153 (20%), Positives = 57/153 (37%), Gaps = 19/153 (12%)
Query: 138 LQGISFAEK-KSIDTVVVRPDKKELLSKVEKSSRKRI------PSQDAIAIVRNRVIANW 190
LQ AEK K+ + +P + + + R SQ+ V +V+ W
Sbjct: 98 LQPAPLAEKSKAPKSEPAKPALQSPGLSTDTGTFTRSAPAAGELSQNIQDKVLAQVVRMW 157
Query: 191 NIPSDFKRFKKLRVKMHFQLNQKGFVLGK--------INVDVVGGT---ELVRRMLRENA 239
+ S R + + +N+ G + G + + G + E + + E
Sbjct: 158 HFNSAALRGSDIILSASLLVNRDGTLSGPMHKDAPWNPDAAIRGYSRLPEGTTKQMMETF 217
Query: 240 RKAVIKSQAFRLSPSTYKSW-RNITLFFVPSKM 271
A+ +Q +L P K W R++ L F P +
Sbjct: 218 LVALRMAQPLQLPPDDGKPWPRHMMLRFKPGDL 250
>gi|294678713|ref|YP_003579328.1| TolA protein [Rhodobacter capsulatus SB 1003]
gi|294477533|gb|ADE86921.1| TolA protein [Rhodobacter capsulatus SB 1003]
Length = 439
Score = 50.5 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/102 (21%), Positives = 44/102 (43%), Gaps = 12/102 (11%)
Query: 178 AIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKI------NVDVVGGTELV 231
+ V A WN+ + +R + +++ + GK ++ GG++
Sbjct: 339 EKEALIVDVKACWNV--GALSSEAMRTTVTVRVDMQEN--GKPVVSSIKMIEATGGSDAA 394
Query: 232 RRMLRENARKAVIKSQA--FRLSPSTYKSWRNITLFFVPSKM 271
R E AR+A+++ + F L + W+ I + F P+KM
Sbjct: 395 ARQAFEAARRAIVRCGSDGFPLPAEKFGWWQQIEIVFNPTKM 436
>gi|319784051|ref|YP_004143527.1| hypothetical protein Mesci_4367 [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317169939|gb|ADV13477.1| hypothetical protein Mesci_4367 [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 135
Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 14/88 (15%), Positives = 30/88 (34%), Gaps = 8/88 (9%)
Query: 167 KSSRKRIPSQDAIAIVRN---RVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVD 223
+S + S D + ++ + A W P + + + F L + G ++GK
Sbjct: 24 RSQERSCRSTDPVDTIKEMSDAIYACWKPPPGTAG---MSLTLRFSLRRNGTLIGKPRAT 80
Query: 224 VV--GGTELVRRMLRENARKAVIKSQAF 249
G R + +A+ +
Sbjct: 81 YSDLGTDAQRSRAFVASILRALDDALPL 108
>gi|170748566|ref|YP_001754826.1| hypothetical protein Mrad2831_2148 [Methylobacterium radiotolerans
JCM 2831]
gi|170655088|gb|ACB24143.1| conserved hypothetical protein [Methylobacterium radiotolerans JCM
2831]
Length = 165
Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 14/82 (17%), Positives = 28/82 (34%), Gaps = 5/82 (6%)
Query: 177 DAIAIVRNRVIANWNIPSDFK----RFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVR 232
D +A + + A W P + + + L + G ++G V G +
Sbjct: 63 DTLAELYPALAACWQAPGGLGRPSGGADDIEITLRLALRRDGSLIGPPRVTYAAGVAGDQ 122
Query: 233 R-MLRENARKAVIKSQAFRLSP 253
R L A+ + ++P
Sbjct: 123 RTALVRGTLDALARCTPAHITP 144
>gi|319899381|ref|YP_004159478.1| TolA protein [Bartonella clarridgeiae 73]
gi|319403349|emb|CBI76908.1| TolA protein [Bartonella clarridgeiae 73]
Length = 400
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 17/68 (25%), Positives = 28/68 (41%), Gaps = 2/68 (2%)
Query: 203 RVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSP-STYKSWRN 261
V++ F LN G+V+G+ +D + G E ++ + AV Q + P Y W
Sbjct: 327 VVRLQFYLNNHGYVIGEPKIDPLRGEESQLTIMTQQVYAAVFSCQPYENLPRDQYNLWGQ 386
Query: 262 -ITLFFVP 268
P
Sbjct: 387 GFDFNVDP 394
>gi|332188265|ref|ZP_08389993.1| hypothetical protein SUS17_3371 [Sphingomonas sp. S17]
gi|332011764|gb|EGI53841.1| hypothetical protein SUS17_3371 [Sphingomonas sp. S17]
Length = 343
Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 24/123 (19%), Positives = 39/123 (31%), Gaps = 18/123 (14%)
Query: 156 PDKKELLS--KVEKSSRKRIPSQDAIAIVRNRVIANWN--IPSDFKRFKKLRVKMHFQLN 211
P K E K+ I S + +V N + +++RV M+ +LN
Sbjct: 223 PSKSEAAPATKIGAQQLANIAS-----AILRQVQPCANRQVTPG-PGAERIRVTMNLKLN 276
Query: 212 QKGFVLGKINVDVVGGTELVRRMLREN----ARKAVIKSQAFRLSPST-YK---SWRNIT 263
+ G + V G + + A R P+ Y W N T
Sbjct: 277 RDGSLAAAPRVVGHSGVDGENDRYVDRVDDLAIATFKGCSPLRGLPAELYDVPGGWSNFT 336
Query: 264 LFF 266
L +
Sbjct: 337 LRY 339
>gi|189183649|ref|YP_001937434.1| hypothetical protein OTT_0742 [Orientia tsutsugamushi str. Ikeda]
gi|189180420|dbj|BAG40200.1| hypothetical protein OTT_0742 [Orientia tsutsugamushi str. Ikeda]
Length = 409
Score = 48.6 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 25/187 (13%), Positives = 73/187 (39%), Gaps = 6/187 (3%)
Query: 90 KTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKS- 148
++ E++T +++++ + + + ++ P I T+ +K+
Sbjct: 223 QSSLIEHKTNVATTTESNASTTQPIIPKVIDPPLKSSHIEDKTSVPHTNDTSHSITQKNN 282
Query: 149 IDTVVVRPDKKELL----SKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRV 204
+ T + +++ + S+ ++ S ++ ++ A+WN F +
Sbjct: 283 LATSNIAAEQQYIANNHASRQNTNNTDNTNSTSYTDTIKYQIQAHWNHTIGFIPGISTVL 342
Query: 205 KMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSP-STYKSWRNIT 263
++ L+ + I+ + V + +N ++A+ + F+ P Y +W+ +
Sbjct: 343 MVNLTLDGTIENITDISHNCPNNNTTVCNVFIQNVKRAIWAASPFQELPKEEYNAWQQLV 402
Query: 264 LFFVPSK 270
L F P
Sbjct: 403 LEFNPED 409
>gi|327399146|ref|YP_004340015.1| hypothetical protein Hipma_0990 [Hippea maritima DSM 10411]
gi|327181775|gb|AEA33956.1| hypothetical protein Hipma_0990 [Hippea maritima DSM 10411]
Length = 236
Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 21/120 (17%), Positives = 44/120 (36%), Gaps = 8/120 (6%)
Query: 154 VRPDKKELLSKVE-KSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQ 212
+ KK L S+ E + S K+ S + I+++ + NW + D + +L+
Sbjct: 120 IETLKKHLASQQEAQKSYKKALSAGYVNIIQSSIYNNWGVSKDVIDDNVFITTVKIKLDY 179
Query: 213 KGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPSTY--KSWRNITLFFVPSK 270
KG ++ + + G + + A+ S+ F P + F +
Sbjct: 180 KGNLI-NLRILKSSGNAYFDGTVID----AIRSSEPFTPPPKEILSDGVVEFIITFDSRE 234
>gi|218507980|ref|ZP_03505858.1| outer membrane protein [Rhizobium etli Brasil 5]
Length = 306
Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 21/124 (16%), Positives = 40/124 (32%), Gaps = 13/124 (10%)
Query: 90 KTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKS- 148
K E ++ + E K + +P DK+K K + +
Sbjct: 186 KPQVKPPEPQKPAEKPPE---KTPDQPKAAEAPTDKKKADKKQEVAKSASSMKSDFNADE 242
Query: 149 IDTVVVRPDKKELLSK---------VEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRF 199
I ++ + D +K +KS+ SQ +R+ + NW I +R
Sbjct: 243 ISALLNKTDPSAGGAKRSTQEASLGAKKSNGGSKLSQSEEDAMRSLIEGNWLITPGMERL 302
Query: 200 KKLR 203
+
Sbjct: 303 SGMV 306
>gi|329848729|ref|ZP_08263757.1| tonB-like protein [Asticcacaulis biprosthecum C19]
gi|328843792|gb|EGF93361.1| tonB-like protein [Asticcacaulis biprosthecum C19]
Length = 250
Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 33/204 (16%), Positives = 67/204 (32%), Gaps = 25/204 (12%)
Query: 90 KTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQG--ISFAEKK 147
K +E + Q E P P K + K D +G +KK
Sbjct: 46 KPEPVPSEADVAVPEPDAQPAPEPQKPAAPAKPDKKPEPIKKDKAPPDPKGKKAPVPDKK 105
Query: 148 SIDTVVVRPDKKELLSKVEKSSRKRIPS-------------------QDAIAIVRNRVIA 188
+ + D K+ + P+ + +A + R+
Sbjct: 106 APQPKTLDLDNLSNPPPAPKNKGRANPNTQQRNGGSLNGSGPQDAGEKAEMAALTKRLGR 165
Query: 189 NWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQA 248
W + D +++++ + FQL++ G ++ V ++ V + A AV +
Sbjct: 166 LWRLNCDIPGTRQVKIVVGFQLSRSGRLIKGP-TWVNRRSDAVWVSNSQLAIAAVNRGAP 224
Query: 249 FRLSPST-YKSWRNITLFFVPSKM 271
F Y+ R++ + F K+
Sbjct: 225 FTDLSDGLYE--RDLEVEFDAEKV 246
>gi|124514217|gb|EAY55732.1| probable TonB family protein [Leptospirillum rubarum]
Length = 278
Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 31/162 (19%), Positives = 59/162 (36%), Gaps = 29/162 (17%)
Query: 108 QALKESALL----RMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVR-------- 155
Q +K++ + R P+ ++K+ L+ + + +K + + VR
Sbjct: 92 QVVKKARIPIVRKRKPIRKIRQKKVLVRPKMVHRLEKKNTSRRKVVSSHPVRVKTAKSSP 151
Query: 156 -PDKKELLSK---------VEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVK 205
P K L V+ + ++ +R+ +NW P + LR
Sbjct: 152 APQKPVLHPSRVSNPHPVPVKMDISGQTFPTFLEHLLISRIKSNWFPPPG---TRGLRAT 208
Query: 206 MHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQ 247
+ F L + G V + V G M + AR AV++S
Sbjct: 209 IQFTLLKDGRVSDQPVVIGSSGNG----MFDDAARMAVLRSV 246
>gi|83311992|ref|YP_422256.1| periplasmic protein TonB, links inner and outer membranes
[Magnetospirillum magneticum AMB-1]
gi|82946833|dbj|BAE51697.1| Periplasmic protein TonB, links inner and outer membranes
[Magnetospirillum magneticum AMB-1]
Length = 255
Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 26/157 (16%), Positives = 49/157 (31%), Gaps = 23/157 (14%)
Query: 138 LQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKR-----------IPSQDAIAIVRNRV 186
LQ AE RP+ + + S +Q + +V
Sbjct: 99 LQAAPHAETSKAPQASTRPEPAKPAGQSPTLSSDSGNFSRAAPAAGDLAQSTQDKILAQV 158
Query: 187 IANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDV-----------VGGTELVRRML 235
+ W+ + R + +N+ G + G +N D + + +
Sbjct: 159 LRMWHFNAGALRGTDTILSATLIVNRDGTLSGPMNKDAPWNPDSVIRGYSSLPDGTNKRM 218
Query: 236 RENARKAVIKSQAFRLSPSTYKSW-RNITLFFVPSKM 271
E A+ +Q ++ P K W R + L F P +
Sbjct: 219 LETFLLALRMAQPLQMPPDDGKPWPRRMLLRFKPGDL 255
>gi|218510316|ref|ZP_03508194.1| hypothetical protein RetlB5_24319 [Rhizobium etli Brasil 5]
Length = 102
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 4/58 (6%)
Query: 216 VLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSP-STYKSWRNITLFF---VPS 269
++G V GG+ + L A +AV++S F + P Y+SWR + L F P+
Sbjct: 44 IVGSSEVTAAGGSAAAGKALSAAALRAVLRSSPFTMIPKENYESWREVVLRFESGDPT 101
>gi|220925038|ref|YP_002500340.1| hypothetical protein Mnod_5191 [Methylobacterium nodulans ORS 2060]
gi|219949645|gb|ACL60037.1| conserved hypothetical protein [Methylobacterium nodulans ORS 2060]
Length = 162
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 15/99 (15%), Positives = 31/99 (31%), Gaps = 14/99 (14%)
Query: 150 DTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQ 209
TV V D+ +++ + ++ + + A W R ++ +
Sbjct: 47 ATVRVPVDRARIVAPADTLTQ-----------LYPALAACWTPLPGLGRA---QITLRLS 92
Query: 210 LNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQA 248
L + G + G +V RR L A+
Sbjct: 93 LTRDGRLQGPPHVTYSSLPLERRRPLASATLDALHACTP 131
>gi|220935398|ref|YP_002514297.1| TonB family protein [Thioalkalivibrio sp. HL-EbGR7]
gi|219996708|gb|ACL73310.1| TonB family protein [Thioalkalivibrio sp. HL-EbGR7]
Length = 308
Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 19/94 (20%), Positives = 35/94 (37%), Gaps = 7/94 (7%)
Query: 176 QDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRML 235
Q +A +R+ V W P+D + ++ V + G + ++ ++ G R +
Sbjct: 222 QQYMAAIRSAVERAWLRPADHQSGQRAVVFVR---QAPGGFIQEVRIESCTGNPAFCRSV 278
Query: 236 RENARKAVIKSQAFRLSPSTYKSWRNITLFFVPS 269
R+A + P R I F PS
Sbjct: 279 EAAVRRA----EPLPSPPDPELFAREIRFTFEPS 308
>gi|15964500|ref|NP_384853.1| hypothetical protein SMc00802 [Sinorhizobium meliloti 1021]
gi|307308445|ref|ZP_07588149.1| conserved hypothetical protein [Sinorhizobium meliloti BL225C]
gi|307319008|ref|ZP_07598439.1| conserved hypothetical protein [Sinorhizobium meliloti AK83]
gi|15073677|emb|CAC45319.1| Conserved hypothetical protein [Sinorhizobium meliloti 1021]
gi|306895422|gb|EFN26177.1| conserved hypothetical protein [Sinorhizobium meliloti AK83]
gi|306901048|gb|EFN31656.1| conserved hypothetical protein [Sinorhizobium meliloti BL225C]
Length = 121
Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 20/93 (21%), Positives = 31/93 (33%), Gaps = 7/93 (7%)
Query: 182 VRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDV--VGGTELVRRMLRENA 239
+ + W P FK V + F G ++G V G E R+ A
Sbjct: 32 LGAALGRCWTPPQGFKDS---FVTLRFGFRGDGTLMGPPRPTAIEVNGDEKQRQAFVTAA 88
Query: 240 RKAVIKSQA--FRLSPSTYKSWRNITLFFVPSK 270
+A+ F S S + TL F ++
Sbjct: 89 TEALQNCVPLEFSKSLSDEIAGNVFTLQFKSAE 121
>gi|27379157|ref|NP_770686.1| hypothetical protein blr4046 [Bradyrhizobium japonicum USDA 110]
gi|27352307|dbj|BAC49311.1| blr4046 [Bradyrhizobium japonicum USDA 110]
Length = 206
Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 16/76 (21%), Positives = 30/76 (39%), Gaps = 3/76 (3%)
Query: 177 DAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVD-VVGGTELVRRML 235
D I + + W+ P+D R +++ + F N+ G ++G + G R
Sbjct: 106 DTIGDLFAELRTCWSPPADNARA-GMQMSVRFSFNKAGGLIGPPRLTYATAGVPADTRTT 164
Query: 236 RENARKAVIK-SQAFR 250
NA A +K +
Sbjct: 165 YLNAIDASLKACLPLK 180
>gi|121602816|ref|YP_988483.1| TolA domain-containing protein [Bartonella bacilliformis KC583]
gi|120614993|gb|ABM45594.1| TolA domain protein [Bartonella bacilliformis KC583]
Length = 497
Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 17/68 (25%), Positives = 26/68 (38%), Gaps = 2/68 (2%)
Query: 203 RVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSP-STYKSWRN 261
V++ FQL+ G V G +D + G E + ++ AV Q + P Y W
Sbjct: 424 IVRLQFQLDNNGMVRGTPIIDPLQGDESQKTIMTRQVYAAVFACQPYADLPRDQYNLWGQ 483
Query: 262 -ITLFFVP 268
P
Sbjct: 484 GFDFNVDP 491
>gi|227820944|ref|YP_002824914.1| hypothetical protein NGR_c03640 [Sinorhizobium fredii NGR234]
gi|227339943|gb|ACP24161.1| conserved hypothetical protein [Sinorhizobium fredii NGR234]
Length = 130
Score = 46.3 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 14/74 (18%), Positives = 22/74 (29%), Gaps = 5/74 (6%)
Query: 179 IAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDV--VGGTELVRRMLR 236
+ V + W P+ K V + F G ++G V G R
Sbjct: 38 VDEVSEALGKCWTPPAGIKGS---FVTLKFGFRGNGTLMGPPQPTAIRVTGDADQREAFV 94
Query: 237 ENARKAVIKSQAFR 250
A +A+ K
Sbjct: 95 AAATEALEKCMPLE 108
>gi|302038651|ref|YP_003798973.1| putative protein TolA [Candidatus Nitrospira defluvii]
gi|300606715|emb|CBK43048.1| putative Protein TolA [Candidatus Nitrospira defluvii]
Length = 411
Score = 45.9 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 22/115 (19%), Positives = 38/115 (33%), Gaps = 6/115 (5%)
Query: 153 VVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQ 212
V + S +A V+ R+ W P K L V + F+L +
Sbjct: 295 PVTASVPRSKPETRLRVAGMPGSNQYLARVQARISGFWAAPPVDISGKALTVTVRFRLER 354
Query: 213 KGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAF-RLSPSTYKSWRNITLFF 266
G V G + ++ G + A++AV + P S+ + F
Sbjct: 355 DGRV-GSVIIEQSSGNDYYDMA----AQRAVQSAIPLPPFPPDLTDSYFDAHFTF 404
>gi|329893684|ref|ZP_08269818.1| TolA protein [gamma proteobacterium IMCC3088]
gi|328923611|gb|EGG30923.1| TolA protein [gamma proteobacterium IMCC3088]
Length = 250
Score = 45.9 bits (107), Expect = 0.007, Method: Composition-based stats.
Identities = 51/275 (18%), Positives = 101/275 (36%), Gaps = 51/275 (18%)
Query: 7 LAISMILHVMFLLLLYFNFNV---QLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQ 63
+ +++++H + LL+L N+N + +++S + SK K+ V+
Sbjct: 15 VTVTVVIHGLGLLMLLINWNSVIPEYYETTKPTQVISAKLVDVASIPKSKPKRSITDVIP 74
Query: 64 FKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPY 123
+ S+QE Q+ + D + AT + + V+P
Sbjct: 75 NRPSTQELNQ---QSQQINTKPIDTKVSAATP------------------VIPKETVAP- 112
Query: 124 DKQKISKATNKEQ--DLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAI 181
K N Q + ++ K +ID + E S ++ + A+
Sbjct: 113 --GAQPKTPNPAQRFTAEELARLTKTNIDQSLAA----------EGDSSEQDLTASYTAL 160
Query: 182 VRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARK 241
+R V+ W+ P + ++ + QL G ++G V G R +A
Sbjct: 161 IRQTVVNYWSRPPSARN--GMQTVLQLQLIPTGDIVGVTVVQSSGDAAFDR-----SAVN 213
Query: 242 AVIKSQAF----RLSPSTYK-SWRNITLFFVPSKM 271
AV K+ F +L P ++ ++R L F P +
Sbjct: 214 AVEKAARFPELQKLPPREFEKTFRRFKLLFKPEDL 248
>gi|115524774|ref|YP_781685.1| hypothetical protein RPE_2768 [Rhodopseudomonas palustris BisA53]
gi|115518721|gb|ABJ06705.1| conserved hypothetical protein [Rhodopseudomonas palustris BisA53]
Length = 146
Score = 45.5 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 10/79 (12%), Positives = 28/79 (35%), Gaps = 5/79 (6%)
Query: 176 QDAIAIVR---NRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINV--DVVGGTEL 230
+ I ++ + W P+ + +++ + + G +LGK V + ++
Sbjct: 28 EARIDTLKELFATLGRCWRAPALAQGSAGMQITVLVSFRRDGSILGKPKVTFESADASDS 87
Query: 231 VRRMLRENARKAVIKSQAF 249
R R + + +
Sbjct: 88 DRLAYRVAVMETLQRCTPL 106
>gi|86749989|ref|YP_486485.1| hypothetical protein RPB_2872 [Rhodopseudomonas palustris HaA2]
gi|86573017|gb|ABD07574.1| conserved hypothetical protein [Rhodopseudomonas palustris HaA2]
Length = 147
Score = 45.1 bits (105), Expect = 0.011, Method: Composition-based stats.
Identities = 22/129 (17%), Positives = 43/129 (33%), Gaps = 13/129 (10%)
Query: 146 KKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVK 205
++++ V+ L + + RI D + + + W P ++
Sbjct: 5 RRNVVAAVLIASAIGALGRAAVAQEARI---DNLDGLFAALKQCWRPPQLAPGDPGKQIT 61
Query: 206 MHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARK-AVIKS------QAFRLSPSTYKS 258
+ + G +LGK + T L A + AV+++ F S +
Sbjct: 62 VLVSFKRDGQILGKPRITFESATTPGFDSL---AYRIAVMETLQRCTPLPFTQSMGNAVA 118
Query: 259 WRNITLFFV 267
R TL F
Sbjct: 119 GRPFTLRFD 127
>gi|316934202|ref|YP_004109184.1| hypothetical protein Rpdx1_2868 [Rhodopseudomonas palustris DX-1]
gi|315601916|gb|ADU44451.1| hypothetical protein Rpdx1_2868 [Rhodopseudomonas palustris DX-1]
Length = 147
Score = 44.7 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 13/81 (16%), Positives = 28/81 (34%), Gaps = 4/81 (4%)
Query: 177 DAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRR--- 233
D + + + W+ P +++ + + G +LGK + E R
Sbjct: 33 DNLDALFFAMKQCWHPPRLPPGHPGMQITVLVSFKRNGEILGKPRITFES-PEAGRDDSL 91
Query: 234 MLRENARKAVIKSQAFRLSPS 254
R +A+ + +PS
Sbjct: 92 AYRVAVMEALQRCTPLPFTPS 112
>gi|260460836|ref|ZP_05809086.1| conserved hypothetical protein [Mesorhizobium opportunistum
WSM2075]
gi|259033413|gb|EEW34674.1| conserved hypothetical protein [Mesorhizobium opportunistum
WSM2075]
Length = 127
Score = 44.7 bits (104), Expect = 0.015, Method: Composition-based stats.
Identities = 14/75 (18%), Positives = 27/75 (36%), Gaps = 5/75 (6%)
Query: 177 DAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVV--GGTELVRRM 234
D I + + A W P+ + + + F L + G ++GK G + R
Sbjct: 29 DTIEEMSEAIFACWKPPAGTAG---MSLTLQFSLRRNGTLIGKPRATYSDLGADAQLSRA 85
Query: 235 LRENARKAVIKSQAF 249
+ KA+ +
Sbjct: 86 FVASILKALDDALPL 100
>gi|289662190|ref|ZP_06483771.1| TonB-like protein [Xanthomonas campestris pv. vasculorum NCPPB702]
Length = 432
Score = 44.3 bits (103), Expect = 0.018, Method: Composition-based stats.
Identities = 16/105 (15%), Positives = 32/105 (30%), Gaps = 12/105 (11%)
Query: 151 TVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKR----FKKLRVKM 206
+ V P + +S+ + Q + R W + +LRV +
Sbjct: 328 QIAVSPTGTPDHIAIVRSTPAGVFDQTVLDAARR-----WRFTPALEDGRAVASELRVPV 382
Query: 207 HFQLNQKGFVLGKINVDVVGGTELVRRMLREN---ARKAVIKSQA 248
F+L+ + ++R ++ AR A K
Sbjct: 383 RFELDPPDTASAITTLSADADAAGLQRTAAQSERVARCASAKCAP 427
>gi|57165210|ref|NP_101933.2| hypothetical protein msr0050 [Mesorhizobium loti MAFF303099]
gi|14021106|dbj|BAB47719.1| msr0050 [Mesorhizobium loti MAFF303099]
Length = 135
Score = 44.3 bits (103), Expect = 0.020, Method: Composition-based stats.
Identities = 12/75 (16%), Positives = 28/75 (37%), Gaps = 5/75 (6%)
Query: 177 DAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVV--GGTELVRRM 234
+ + + + A W P+ + + + F L + G ++GK G + R
Sbjct: 37 NTLKEMSEAIYACWRPPAGTAG---MSLTLQFSLRRNGTLIGKPRATYSDLGTDPQLSRA 93
Query: 235 LRENARKAVIKSQAF 249
+ KA+ ++
Sbjct: 94 FVASILKALDEALPL 108
>gi|242089677|ref|XP_002440671.1| hypothetical protein SORBIDRAFT_09g004883 [Sorghum bicolor]
gi|241945956|gb|EES19101.1| hypothetical protein SORBIDRAFT_09g004883 [Sorghum bicolor]
Length = 631
Score = 43.6 bits (101), Expect = 0.030, Method: Composition-based stats.
Identities = 40/216 (18%), Positives = 85/216 (39%), Gaps = 31/216 (14%)
Query: 34 SRREMLSVDNIYNEDYHSSKYKKI-EEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTH 92
S E S+ NE+ HS +K EEPV ++ L FS H
Sbjct: 103 SDVENASI----NENSHSDTDEKEFEEPVSDWEDLDDNALQYQFS-------------PH 145
Query: 93 ATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTV 152
+ +E++ SS Q ++ + V+P +++K + + E + ++ +
Sbjct: 146 SNPDESQNSSYKTVCQGMELPECIHPVVNPVNEEKHTMLVHNEHKAAVSIDKIESEVNNI 205
Query: 153 V----VRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHF 208
++P++ +L K+ K + S A + ++ N D ++ +V +
Sbjct: 206 PGGVGLQPERHTILKKL-----KELFSIRQQAALSSQ--DCVNSSPDQCVPEETKVNANL 258
Query: 209 QLNQ-KGFVLGKINVDVVGGT-ELVRRMLRENARKA 242
G V K + + G +R+++ + +R+A
Sbjct: 259 SCGPFDGTVEDKPSFEEHRGEFAELRQIIADLSRRA 294
>gi|77919983|ref|YP_357798.1| TonB-dependent receptor [Pelobacter carbinolicus DSM 2380]
gi|77546066|gb|ABA89628.1| outer membrane transport energization protein TonB [Pelobacter
carbinolicus DSM 2380]
Length = 245
Score = 43.6 bits (101), Expect = 0.032, Method: Composition-based stats.
Identities = 20/94 (21%), Positives = 33/94 (35%), Gaps = 17/94 (18%)
Query: 179 IAIVRNRVIANWNIPS-DFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRE 237
+ +R RV A P +R ++ + F+L G + G V G R L +
Sbjct: 156 LNAIRARVDAAKRYPQMAQQRRQEGVATVTFRLTPDGRLAGTPTVTRSSG----YRQLDK 211
Query: 238 NARKAVIKSQAFRLSPSTYKSWRNITLFFVPSKM 271
A +AV + + P P +M
Sbjct: 212 AALRAVNRGAPYPAFP------------LDPRQM 233
>gi|92113975|ref|YP_573903.1| TonB-like protein [Chromohalobacter salexigens DSM 3043]
gi|91797065|gb|ABE59204.1| Cell division and transport-associated protein TolA
[Chromohalobacter salexigens DSM 3043]
Length = 366
Score = 43.6 bits (101), Expect = 0.034, Method: Composition-based stats.
Identities = 31/148 (20%), Positives = 54/148 (36%), Gaps = 18/148 (12%)
Query: 135 EQDLQGISFAEKKSIDTVVVRPDKKELLSKV-EKSSRKRIPSQDAIAI------VRNRVI 187
++ + A ++ + + + L S + E+ Q A VR V
Sbjct: 225 KRQQEEAEAARQRELAERAAQANASSLESMISEEQQSIANAEQAREAANGFKNLVRRYVE 284
Query: 188 ANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQ 247
+WN+P R +LR + QL G ++G + G R + AV ++
Sbjct: 285 QSWNLPPSASR--QLRAIVRIQLLPTGELVGA-TITQSSGDAAFDR----SVINAVERAA 337
Query: 248 AFR----LSPSTYKSWRNITLFFVPSKM 271
FR L S + +R L F P +
Sbjct: 338 PFREMSELDASVQRQFREFNLDFNPEDI 365
>gi|38322718|gb|AAR16272.1| cortactin-binding protein 2, 3 prime [Canis lupus familiaris]
Length = 957
Score = 43.2 bits (100), Expect = 0.039, Method: Composition-based stats.
Identities = 35/160 (21%), Positives = 61/160 (38%), Gaps = 17/160 (10%)
Query: 35 RREMLSVDNIYNEDYHSSKYKKIE---------EPVVQFKGSSQENLVRDFSVQENGDRF 85
+ + LS N YN + SK K +E E + + +LV++ +
Sbjct: 794 KIKALSQLN-YNRNASLSKQKSLENDLSLTLNLEQRLSLGSDDEADLVQELQSMCSSKSE 852
Query: 86 SDQTKTHATENETKRSSSSKGEQALKESALLRMPV-----SPYDKQKISKATNKEQDLQG 140
SD +K + ++ +R SS A + RMPV SP + ++ +N+ Q
Sbjct: 853 SDISKIADSRDDLRRFDSSGNSPAFSATVNPRMPVSPKEPSPLSSHQAAECSNR-QSKTE 911
Query: 141 ISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIA 180
+ + KS V R + ++SS Q I
Sbjct: 912 LGVSRVKSFLPVP-RSKATQCSPNTKRSSSSSNTRQTEIN 950
>gi|307545155|ref|YP_003897634.1| TonB-like protein [Halomonas elongata DSM 2581]
gi|307217179|emb|CBV42449.1| TonB-like protein [Halomonas elongata DSM 2581]
Length = 382
Score = 43.2 bits (100), Expect = 0.041, Method: Composition-based stats.
Identities = 23/97 (23%), Positives = 34/97 (35%), Gaps = 11/97 (11%)
Query: 179 IAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLREN 238
I +VR V W IP + V + +L G V ++ G R
Sbjct: 292 INLVRQAVEQAWVIPPNVGNNANALVAI--RLGPSGEVF-SASIARSSGNSAFDRA---- 344
Query: 239 ARKAVIKSQAFR----LSPSTYKSWRNITLFFVPSKM 271
A +AV + F L S + +R L F P +
Sbjct: 345 AIQAVESAAPFSELRELPASVQRDYREFNLNFRPGDI 381
>gi|91776692|ref|YP_546448.1| hypothetical protein Mfla_2340 [Methylobacillus flagellatus KT]
gi|91710679|gb|ABE50607.1| Cell division and transport-associated protein TolA
[Methylobacillus flagellatus KT]
Length = 276
Score = 43.2 bits (100), Expect = 0.044, Method: Composition-based stats.
Identities = 16/103 (15%), Positives = 39/103 (37%), Gaps = 8/103 (7%)
Query: 172 RIPSQDAIAIVRNRVIANW--NIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTE 229
+ +Q I ++ N+ K +++ L G V+G + G
Sbjct: 176 NVANQGEIDKYLGQIRDKIRRNVNRQLCGTGKPELEVGISLMPTGEVIGVPRILKSSGLP 235
Query: 230 LVRRMLRENARKAVIKSQAFRLS--PSTYKSWRNITLFFVPSK 270
+ +A++++Q + P + +R++ L F P++
Sbjct: 236 ACDEAIE----RAILQAQPLPVPTQPDLFSKFRDLRLKFRPNE 274
>gi|146340690|ref|YP_001205738.1| putative signal peptide [Bradyrhizobium sp. ORS278]
gi|146193496|emb|CAL77512.1| conserved hypothetical protein; putative signal peptide
[Bradyrhizobium sp. ORS278]
Length = 198
Score = 43.2 bits (100), Expect = 0.045, Method: Composition-based stats.
Identities = 8/76 (10%), Positives = 25/76 (32%), Gaps = 2/76 (2%)
Query: 177 DAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVD--VVGGTELVRRM 234
D I + + + W P + +++ + F + G ++ + G + R
Sbjct: 92 DTIGDLFAALRSCWTPPPEDDARAGMQMTVRFSFKRTGEMVAPPRLTFATSGVSADTRAT 151
Query: 235 LRENARKAVIKSQAFR 250
+ ++ +
Sbjct: 152 YLKAISTSLDACLPLK 167
>gi|85858719|ref|YP_460921.1| tolA protein [Syntrophus aciditrophicus SB]
gi|85721810|gb|ABC76753.1| tolA protein [Syntrophus aciditrophicus SB]
Length = 271
Score = 42.8 bits (99), Expect = 0.047, Method: Composition-based stats.
Identities = 19/88 (21%), Positives = 38/88 (43%), Gaps = 6/88 (6%)
Query: 185 RVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVI 244
R+ +W++P D + + +H ++ + G V G G + E+A +AV
Sbjct: 188 RIKRHWSMPPDLLPRQNIEAVIHVRILRSGAVEGISFEQRSGNS-----YFDESAMRAVR 242
Query: 245 KSQAFRLSPS-TYKSWRNITLFFVPSKM 271
K+ F P T + + + F S++
Sbjct: 243 KASPFPPLPEGTGEEGIEMGIRFHSSEL 270
>gi|21244087|ref|NP_643669.1| TonB-like protein [Xanthomonas axonopodis pv. citri str. 306]
gi|21109712|gb|AAM38205.1| TonB-like protein [Xanthomonas axonopodis pv. citri str. 306]
Length = 432
Score = 42.8 bits (99), Expect = 0.048, Method: Composition-based stats.
Identities = 17/103 (16%), Positives = 34/103 (33%), Gaps = 13/103 (12%)
Query: 151 TVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKR----FKKLRVKM 206
+ V P + +S+ + Q + R +W + ++RV +
Sbjct: 328 QIAVSPTGTPEHIAIVRSTPAGVFDQTVLDAAR-----HWRFTPALEDGKAVASEVRVPV 382
Query: 207 HFQLNQKGFVLGKINV-DVVGGTELVRRMLRENARKAVIKSQA 248
F+L+ V D+ GTE R + + V +
Sbjct: 383 RFELDPP---DAAPAVADIHSGTEAAARPHAADRSERVARCAP 422
>gi|156549270|ref|XP_001599762.1| PREDICTED: similar to GA18227-PA [Nasonia vitripennis]
Length = 2301
Score = 42.8 bits (99), Expect = 0.048, Method: Composition-based stats.
Identities = 30/167 (17%), Positives = 69/167 (41%), Gaps = 10/167 (5%)
Query: 35 RREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHAT 94
+RE +V ++ +++ + K +E V K + E + NGD S +K +
Sbjct: 1696 KREEKAVKSMTSDESRLTSPTKSKESVYHKKSGTSE------EDKSNGDCKSSMSK-DSM 1748
Query: 95 ENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVV 154
+ + + AL + S DK++ SK T+++ D S K+ +V
Sbjct: 1749 AIDLDKFVKDAAKDALNINKPES---SADDKKQDSKNTSRQTDTHKTSMEIKEKSQSVDA 1805
Query: 155 RPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKK 201
+ ++ S ++ K + S+D ++++ + + S ++
Sbjct: 1806 AKRRSDMKSTEKERMFKSMESKDKRERLKSQREKSKSTESAMEKSDD 1852
>gi|148255168|ref|YP_001239753.1| hypothetical protein BBta_3769 [Bradyrhizobium sp. BTAi1]
gi|146407341|gb|ABQ35847.1| putative exported protein of unknown function [Bradyrhizobium sp.
BTAi1]
Length = 198
Score = 42.8 bits (99), Expect = 0.054, Method: Composition-based stats.
Identities = 10/76 (13%), Positives = 28/76 (36%), Gaps = 2/76 (2%)
Query: 177 DAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVD--VVGGTELVRRM 234
D I+ + + + W PS+ +++ + F + G ++ V G + +R
Sbjct: 92 DTISDLFAALRSCWTPPSEDSARAGMQMTVRFSFKRTGEMVAPPRVTFATSGASADIRAT 151
Query: 235 LRENARKAVIKSQAFR 250
+ ++ +
Sbjct: 152 YLKAINASLDACLPLK 167
>gi|39935669|ref|NP_947945.1| hypothetical protein RPA2603 [Rhodopseudomonas palustris CGA009]
gi|192291251|ref|YP_001991856.1| hypothetical protein Rpal_2873 [Rhodopseudomonas palustris TIE-1]
gi|39649522|emb|CAE28044.1| conserved hypothetical protein [Rhodopseudomonas palustris CGA009]
gi|192285000|gb|ACF01381.1| conserved hypothetical protein [Rhodopseudomonas palustris TIE-1]
Length = 147
Score = 42.4 bits (98), Expect = 0.062, Method: Composition-based stats.
Identities = 13/91 (14%), Positives = 31/91 (34%), Gaps = 4/91 (4%)
Query: 167 KSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVG 226
+ + + D + + + + W P +++ + + G +LGK +
Sbjct: 23 RPASAQNAPIDNLNALFSAMKQCWRSPRLPAGNPGMQITVLVSFTRSGEILGKPRITFES 82
Query: 227 GTELVRR---MLRENARKAVIKSQAFRLSPS 254
E R R +A+ + +PS
Sbjct: 83 -PEAGRDDSLAYRVAVMEALQRCTPLPFTPS 112
>gi|146182355|ref|XP_001024443.2| hypothetical protein TTHERM_01225670 [Tetrahymena thermophila]
gi|146143862|gb|EAS04198.2| hypothetical protein TTHERM_01225670 [Tetrahymena thermophila
SB210]
Length = 834
Score = 42.0 bits (97), Expect = 0.081, Method: Composition-based stats.
Identities = 31/148 (20%), Positives = 63/148 (42%), Gaps = 16/148 (10%)
Query: 41 VDNIYNEDYHSSKYKKIEE-PVVQFKGSSQENLVRDFSVQENG--DRFSDQTKTHATENE 97
+ N YN++ + KY +V+ + S +++ +F Q++ DQTK+ A +
Sbjct: 313 IQNEYNDNIQNQKYIDQSNIQLVREENSPEQSQNYNFQNQQSKLFQNSIDQTKSQANILQ 372
Query: 98 TKRSSSSKGEQALKESA------LLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDT 151
K+S+S + Q K+S+ + + YD + S K + S++ K+ +
Sbjct: 373 VKQSNSKQDFQIQKDSSQISSKKIPQSSEKIYDSCQQSDQNQKNNESFEQSYSINKNNCS 432
Query: 152 VVVRPDKKELLSKVEKSSRKRIPSQDAI 179
+ K +KS R +D +
Sbjct: 433 ITTSNFK-------DKSLRTNNSEEDEL 453
>gi|254000101|ref|YP_003052164.1| protein TolA [Methylovorus sp. SIP3-4]
gi|313202060|ref|YP_004040718.1| protein tola [Methylovorus sp. MP688]
gi|253986780|gb|ACT51637.1| protein TolA [Methylovorus sp. SIP3-4]
gi|312441376|gb|ADQ85482.1| protein TolA [Methylovorus sp. MP688]
Length = 260
Score = 42.0 bits (97), Expect = 0.088, Method: Composition-based stats.
Identities = 24/127 (18%), Positives = 45/127 (35%), Gaps = 13/127 (10%)
Query: 146 KKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVK 205
K + KV+ S + I ++ N++ N N S K +
Sbjct: 145 KATQAAAPKTGPAASASPKVDPSEVAKY-----IGLITNKIRRNVN--SQLCGSGKPELT 197
Query: 206 MHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLS--PSTYKSWRNIT 263
+ L G ++G + G + +A+++SQ L P +RN+
Sbjct: 198 FNLNLMPTGELIGAPRLVKGSGIP----ACDDAVERAILQSQPLPLPTQPDLLAQFRNLE 253
Query: 264 LFFVPSK 270
L F P++
Sbjct: 254 LKFRPNE 260
>gi|91977071|ref|YP_569730.1| hypothetical protein RPD_2600 [Rhodopseudomonas palustris BisB5]
gi|91683527|gb|ABE39829.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB5]
Length = 147
Score = 41.6 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 16/107 (14%), Positives = 32/107 (29%), Gaps = 8/107 (7%)
Query: 169 SRKRIPSQDA----IAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDV 224
S + +Q + + + W P +++ + + G +LGK +
Sbjct: 21 SSRVALAQATPIDNLNELFAALKQCWRPPQLTPGDPGMQITVLVSFKRDGEILGKPRITF 80
Query: 225 VGGTELVRRML--RENARKAVIKSQ--AFRLSPSTYKSWRNITLFFV 267
L R + + + F S + R TL F
Sbjct: 81 ESANTPGADSLVYRIAVMETLQRCTPLPFTQSMGNAVAGRPFTLRFD 127
>gi|323138232|ref|ZP_08073304.1| TolA protein [Methylocystis sp. ATCC 49242]
gi|322396484|gb|EFX99013.1| TolA protein [Methylocystis sp. ATCC 49242]
Length = 411
Score = 41.6 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 32/187 (17%), Positives = 66/187 (35%), Gaps = 14/187 (7%)
Query: 88 QTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKK 147
+ K EN +S K + A +S P S +D I+ ++E + S ++
Sbjct: 235 EEKPAKAENPDGEASDKKAKGAKPKSGDEAAPKSKFDASSIANLLSREAPQRTASTGKEV 294
Query: 148 SIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMH 207
++ + K+ S RI S + + W V +
Sbjct: 295 RTASLGAPEGAAQ---KLSASMEARIASY-----IHDHYHPCWASALSLGGETYAPV-VE 345
Query: 208 FQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPS--TY--KSWRNIT 263
F L++ G + G+ + + + + E A +AV + ++ Y ++ +T
Sbjct: 346 FHLSRDGALEGRPRL-MNASSSPTEKARGEQALQAVRRCSPMKIPAEFMPYYEEALHEVT 404
Query: 264 LFFVPSK 270
+ F S
Sbjct: 405 IRFQDSN 411
>gi|294665940|ref|ZP_06731205.1| TonB-like protein [Xanthomonas fuscans subsp. aurantifolii str.
ICPB 10535]
gi|292604295|gb|EFF47681.1| TonB-like protein [Xanthomonas fuscans subsp. aurantifolii str.
ICPB 10535]
Length = 432
Score = 41.6 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 15/102 (14%), Positives = 32/102 (31%), Gaps = 11/102 (10%)
Query: 151 TVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKR----FKKLRVKM 206
+ V P + +S+ + Q + R +W + ++RV +
Sbjct: 328 QIAVSPTGTPEHIAIVRSTPAGVFDQTVLDAAR-----HWRFTPTLEDGNAVASEVRVPV 382
Query: 207 HFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQA 248
F+L+ ++ GTE R + + V
Sbjct: 383 RFELDPPETASAVADIH--SGTEATARPNAADRSEPVASCAP 422
>gi|294625921|ref|ZP_06704534.1| TonB-like protein [Xanthomonas fuscans subsp. aurantifolii str.
ICPB 11122]
gi|292599773|gb|EFF43897.1| TonB-like protein [Xanthomonas fuscans subsp. aurantifolii str.
ICPB 11122]
Length = 432
Score = 41.6 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 15/102 (14%), Positives = 32/102 (31%), Gaps = 11/102 (10%)
Query: 151 TVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKR----FKKLRVKM 206
+ V P + +S+ + Q + R +W + ++RV +
Sbjct: 328 QIAVSPTGTPEHIAIVRSTPAGVFDQTVLDAAR-----HWRFTPTLEDGNAVASEVRVPV 382
Query: 207 HFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQA 248
F+L+ ++ GTE R + + V
Sbjct: 383 RFELDPPETASAVADIH--SGTEATARPNAADRSEPVASCAP 422
>gi|86605928|ref|YP_474691.1| TonB family protein [Synechococcus sp. JA-3-3Ab]
gi|86554470|gb|ABC99428.1| TonB family protein [Synechococcus sp. JA-3-3Ab]
Length = 363
Score = 41.6 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 16/88 (18%), Positives = 36/88 (40%), Gaps = 9/88 (10%)
Query: 179 IAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLREN 238
+A ++ +V NW + R + F + + G + I + G++ +
Sbjct: 268 LAALQRKVEQNW--IPGQTGTSR-RTVVIFTVGRGGELQ-SIRLARTSGSQQT----DDA 319
Query: 239 ARKAVIKSQAFRLSPSTYKSWRNITLFF 266
A A+ ++ F P Y+ ++T+ F
Sbjct: 320 ALTAIQRAAPFLPLPEAYEG-NSVTINF 346
>gi|42521813|ref|NP_967193.1| TonB-like protein [Bdellovibrio bacteriovorus HD100]
gi|39574343|emb|CAE77847.1| TonB-like protein [Bdellovibrio bacteriovorus HD100]
Length = 286
Score = 41.6 bits (96), Expect = 0.12, Method: Composition-based stats.
Identities = 14/77 (18%), Positives = 30/77 (38%), Gaps = 6/77 (7%)
Query: 179 IAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLREN 238
I+ + + NW IP + + + ++ ++ +G +LG+ V G +L
Sbjct: 200 ISDLDRHIKQNWTIPEWLAK-RDYKAQVRVFVDSRGNILGRKIVKSSGNPSYDEEVLAT- 257
Query: 239 ARKAVIKSQAFRLSPST 255
+ +S F P
Sbjct: 258 ----IDRSAPFPAPPEK 270
>gi|47565158|ref|ZP_00236201.1| spore germination protein IA [Bacillus cereus G9241]
gi|47557944|gb|EAL16269.1| spore germination protein IA [Bacillus cereus G9241]
Length = 678
Score = 41.6 bits (96), Expect = 0.13, Method: Composition-based stats.
Identities = 22/108 (20%), Positives = 47/108 (43%), Gaps = 4/108 (3%)
Query: 34 SRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTH- 92
S R+ ++ N+ HS + + K ++ + + S Q+ ++ Q
Sbjct: 59 SSRDKQQDKSVQNQQQHSKQDNSEQNQQQHSKQNNSDQGQQQHSKQDKSEQGQQQHSKQD 118
Query: 93 -ATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQ 139
+ +++ + S K EQ ++ + + S D+Q+ SK N EQ+ Q
Sbjct: 119 NSEQDQQQHSKQDKSEQDQQQHS--KQDNSEQDQQQHSKQDNSEQNQQ 164
>gi|195402301|ref|XP_002059745.1| GJ15760 [Drosophila virilis]
gi|194155959|gb|EDW71143.1| GJ15760 [Drosophila virilis]
Length = 8965
Score = 41.3 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 30/131 (22%), Positives = 55/131 (41%), Gaps = 8/131 (6%)
Query: 39 LSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVR--DFSVQENGD---RFSDQTKTHA 93
S+ ++ E ++ K I + Q + + R F+V+EN R S K
Sbjct: 1029 ASIVSVKEESKSETRRKSIIKSHEQTSEEDTKTVSRRSSFAVEENVSESRRSSVVDKKAL 1088
Query: 94 TENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVV 153
+ E+K+ ++ QA+KE + P DK++I KA +++ + + K SI
Sbjct: 1089 EQVESKKIEANNNPQAIKEEIP---KLKPADKRRIPKAVEEQKPAEELPKLRKTSIAKPK 1145
Query: 154 VRPDKKELLSK 164
P + K
Sbjct: 1146 EEPIPEAAKPK 1156
>gi|263359660|gb|ACY70496.1| hypothetical protein DVIR88_6g0033 [Drosophila virilis]
Length = 8965
Score = 41.3 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 30/131 (22%), Positives = 55/131 (41%), Gaps = 8/131 (6%)
Query: 39 LSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVR--DFSVQENGD---RFSDQTKTHA 93
S+ ++ E ++ K I + Q + + R F+V+EN R S K
Sbjct: 1029 ASIVSVKEESKSETRRKSIIKSHEQTSEEDTKTVSRRSSFAVEENVSESRRSSVVDKKAL 1088
Query: 94 TENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVV 153
+ E+K+ ++ QA+KE + P DK++I KA +++ + + K SI
Sbjct: 1089 EQVESKKIEANNNPQAIKEEIP---KLKPADKRRIPKAVEEQKPAEELPKLRKTSIAKPK 1145
Query: 154 VRPDKKELLSK 164
P + K
Sbjct: 1146 EEPIPEAAKPK 1156
>gi|315498694|ref|YP_004087498.1| tola protein [Asticcacaulis excentricus CB 48]
gi|315416706|gb|ADU13347.1| TolA protein [Asticcacaulis excentricus CB 48]
Length = 268
Score = 41.3 bits (95), Expect = 0.17, Method: Composition-based stats.
Identities = 28/157 (17%), Positives = 51/157 (32%), Gaps = 14/157 (8%)
Query: 119 PVSPYDKQKISKATNKEQDL-------QGISFAEKKSIDTVVVRPDKKELLSKVEKSSRK 171
PV P + K T K + + KS RP + S+R
Sbjct: 108 PVIPAKTKPDPKGTQKPKPQTLDLGALSQYQSSPPKSNTRTPARPTRA---PTDGSSARG 164
Query: 172 RIPSQD--AIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTE 229
+ A+ + ++ W+ D ++R + F ++ G V+ + +
Sbjct: 165 SAAADTGPALNALTAKLQRLWSPNCDVPGGDQVRAVIAFTISPNGRVIKGPEWE-NPRND 223
Query: 230 LVRRMLRENARKAVIKSQAFRLSPST-YKSWRNITLF 265
V + A+ AV K + + P Y IT
Sbjct: 224 PVWQAAAGRAQAAVKKGELYDNLPDGLYNQPLEITFN 260
>gi|27379802|ref|NP_771331.1| hypothetical protein bll4691 [Bradyrhizobium japonicum USDA 110]
gi|27352955|dbj|BAC49956.1| bll4691 [Bradyrhizobium japonicum USDA 110]
Length = 136
Score = 41.3 bits (95), Expect = 0.17, Method: Composition-based stats.
Identities = 12/74 (16%), Positives = 26/74 (35%), Gaps = 3/74 (4%)
Query: 177 DAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVG--GTELVRRM 234
+ I V + W P + + L + + N+ G +LG + ++ R
Sbjct: 30 NTIQDVFRHLRTCWKPPP-AAKARPLDITVVVSFNRSGNILGHPRITYESADASDDDRLQ 88
Query: 235 LRENARKAVIKSQA 248
R +A+ +
Sbjct: 89 YRIAVMEALQRCTP 102
>gi|86608617|ref|YP_477379.1| TonB family protein [Synechococcus sp. JA-2-3B'a(2-13)]
gi|86557159|gb|ABD02116.1| TonB family protein [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 379
Score = 40.9 bits (94), Expect = 0.22, Method: Composition-based stats.
Identities = 16/88 (18%), Positives = 36/88 (40%), Gaps = 9/88 (10%)
Query: 179 IAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLREN 238
+A ++ +V NW + R + F + + G + I + G++ +
Sbjct: 284 LAALQRKVEQNW--IPGQTGTSR-RTVVIFTVGRAGDLQ-SIRLGRTSGSQQT----DDA 335
Query: 239 ARKAVIKSQAFRLSPSTYKSWRNITLFF 266
A A+ ++ F P Y+ ++T+ F
Sbjct: 336 ALTAIQRAAPFLPLPEAYEG-NSVTINF 362
>gi|222098205|ref|YP_002532262.1| spore germination protein gerha [Bacillus cereus Q1]
gi|221242263|gb|ACM14973.1| spore germination protein gerha [Bacillus cereus Q1]
Length = 708
Score = 40.5 bits (93), Expect = 0.22, Method: Composition-based stats.
Identities = 18/94 (19%), Positives = 41/94 (43%)
Query: 46 NEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSK 105
N+ HS + ++ K ++ + + S Q+ ++ Q + ++ S+ +
Sbjct: 102 NQQQHSKQDNSEQDQQQHSKQNNSDQGQQQHSKQDISEQDQQQHSKQNDSEQDQQQSAKQ 161
Query: 106 GEQALKESALLRMPVSPYDKQKISKATNKEQDLQ 139
E + ++ + +S D+Q+ SK N QD Q
Sbjct: 162 DESSQEQQQHPKRDISEQDQQQHSKQDNSGQDQQ 195
>gi|291006086|ref|ZP_06564059.1| hypothetical protein SeryN2_16328 [Saccharopolyspora erythraea NRRL
2338]
Length = 889
Score = 40.5 bits (93), Expect = 0.26, Method: Composition-based stats.
Identities = 20/96 (20%), Positives = 37/96 (38%), Gaps = 3/96 (3%)
Query: 149 IDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHF 208
+D V ++ L V R + + + +R+ + W IP+ R + ++ H
Sbjct: 413 LDVVPPVVAEQSPLPAVADFQRWTV--EQGLPALRDALAPVWTIPAGGAREVPVVIRNHA 470
Query: 209 QLNQKGFV-LGKINVDVVGGTELVRRMLRENARKAV 243
+ Q G V + VG E L A ++V
Sbjct: 471 RSPQSGVVRVEPPEGFAVGDPERWFDALAPGATESV 506
>gi|134099876|ref|YP_001105537.1| hypothetical protein SACE_3337 [Saccharopolyspora erythraea NRRL
2338]
gi|133912499|emb|CAM02612.1| hypothetical protein SACE_3337 [Saccharopolyspora erythraea NRRL
2338]
Length = 897
Score = 40.5 bits (93), Expect = 0.26, Method: Composition-based stats.
Identities = 20/96 (20%), Positives = 37/96 (38%), Gaps = 3/96 (3%)
Query: 149 IDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHF 208
+D V ++ L V R + + + +R+ + W IP+ R + ++ H
Sbjct: 421 LDVVPPVVAEQSPLPAVADFQRWTV--EQGLPALRDALAPVWTIPAGGAREVPVVIRNHA 478
Query: 209 QLNQKGFV-LGKINVDVVGGTELVRRMLRENARKAV 243
+ Q G V + VG E L A ++V
Sbjct: 479 RSPQSGVVRVEPPEGFAVGDPERWFDALAPGATESV 514
>gi|297539677|ref|YP_003675446.1| protein TolA [Methylotenera sp. 301]
gi|297259024|gb|ADI30869.1| protein TolA [Methylotenera sp. 301]
Length = 275
Score = 40.1 bits (92), Expect = 0.37, Method: Composition-based stats.
Identities = 35/182 (19%), Positives = 64/182 (35%), Gaps = 37/182 (20%)
Query: 97 ETKRSSSSKGEQALKESALLRMPVS-PYD-----KQKISKATNKEQDLQGISFAEKKSID 150
E K+ + +ALK+ A + VS P D +Q+ + Q +S K S +
Sbjct: 123 EQKKQLDALKLEALKDDAKPAVKVSKPNDALKKLQQEALAEEKTAGEQQALSS--KASAN 180
Query: 151 TVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQL 210
VV K ++ SK++ N+ ++ L
Sbjct: 181 AGVVGEFKNKIQSKIKG-----------------------NVTKALCGEGNPELRFDISL 217
Query: 211 NQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLS--PSTYKSWRNITLFFVP 268
G + G + G+ E +A++ S+ L P+ + +RN+ L F P
Sbjct: 218 LPTGELSGSPKLVKSSGS----AACDEAVERAIMASEPLPLPTDPTLFSQFRNLNLKFRP 273
Query: 269 SK 270
+
Sbjct: 274 ND 275
>gi|158426088|ref|YP_001527380.1| DNA polymerase A [Azorhizobium caulinodans ORS 571]
gi|158332977|dbj|BAF90462.1| DNA polymerase A [Azorhizobium caulinodans ORS 571]
Length = 1020
Score = 40.1 bits (92), Expect = 0.37, Method: Composition-based stats.
Identities = 20/110 (18%), Positives = 42/110 (38%), Gaps = 9/110 (8%)
Query: 156 PDKKELLSKV----EKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLN 211
PD + E+++ A I+R +I +D ++ +++H +L
Sbjct: 914 PDIAASNPSIRAFNERAAINARLQGTAADIIRRAMIRMEGALADAGLSARMLLQVHDEL- 972
Query: 212 QKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPSTYKSWRN 261
V + +V +VRR++ AR AV + ++ +W
Sbjct: 973 ----VFEVPDAEVEATLPVVRRVMETAARPAVELAVPLQVEARAADNWEE 1018
>gi|320542598|ref|NP_001189208.1| CG42795, isoform A [Drosophila melanogaster]
gi|318068752|gb|ADV37299.1| CG42795, isoform A [Drosophila melanogaster]
Length = 3189
Score = 40.1 bits (92), Expect = 0.37, Method: Composition-based stats.
Identities = 27/153 (17%), Positives = 65/153 (42%), Gaps = 5/153 (3%)
Query: 35 RREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHAT 94
R S N + +SK K EEP K ++ E D + + G++ ++Q +
Sbjct: 1120 RPSGSSSKN-QKDSEKTSKLHKSEEPESNTKETTGETEASDSNDSKIGEKETEQPRIKKL 1178
Query: 95 ENETK---RSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDT 151
+ + R ++ + + ++++S+ + P D+++ E+ + EK S
Sbjct: 1179 PSTAELEDRFNALERKMSVQKSSPSKNKKEPPDEEESKSTKEPEEPEESEKANEKTSGRQ 1238
Query: 152 VVV-RPDKKELLSKVEKSSRKRIPSQDAIAIVR 183
+ + D K+ K ++ + P+++ V+
Sbjct: 1239 TPIAKKDSKDSDQKKSETKENQSPTKNQDEKVK 1271
>gi|281350810|gb|EFB26394.1| hypothetical protein PANDA_005682 [Ailuropoda melanoleuca]
Length = 1612
Score = 39.7 bits (91), Expect = 0.46, Method: Composition-based stats.
Identities = 34/162 (20%), Positives = 58/162 (35%), Gaps = 21/162 (12%)
Query: 37 EMLSVDNI----YNEDYHSSKYKKIE---------EPVVQFKGSSQENLVRDFSVQENGD 83
E + + I YN + SK K +E E + + +LVR+ +
Sbjct: 1449 EGIKIKAISQLNYNRNASLSKQKSLENDLSLTLNLEQRLSLSSDDEADLVRELQSMCSSK 1508
Query: 84 RFSDQTKTHATENETKRSSSSKGEQALKESALLRMP----VSPYDKQKISKATNKEQDLQ 139
SD +K + ++ +R SS A + RMP VSP + ++ +N
Sbjct: 1509 SESDISKIADSRDDLRRFDSSGNNPAFSATVNPRMPVSPKVSPLSSHQPTECSN---SQS 1565
Query: 140 GISFAEKKSIDTVVVRPDKKELLSK-VEKSSRKRIPSQDAIA 180
I + + V K S+ ++SS Q I
Sbjct: 1566 KIELGVSRVKSFLPVPRSKVTQCSQNTKRSSSSSNTRQIEIN 1607
>gi|320542600|ref|NP_649988.2| CG42795, isoform B [Drosophila melanogaster]
gi|318068753|gb|AAF54511.3| CG42795, isoform B [Drosophila melanogaster]
Length = 3068
Score = 39.7 bits (91), Expect = 0.47, Method: Composition-based stats.
Identities = 27/153 (17%), Positives = 65/153 (42%), Gaps = 5/153 (3%)
Query: 35 RREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHAT 94
R S N + +SK K EEP K ++ E D + + G++ ++Q +
Sbjct: 999 RPSGSSSKN-QKDSEKTSKLHKSEEPESNTKETTGETEASDSNDSKIGEKETEQPRIKKL 1057
Query: 95 ENETK---RSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDT 151
+ + R ++ + + ++++S+ + P D+++ E+ + EK S
Sbjct: 1058 PSTAELEDRFNALERKMSVQKSSPSKNKKEPPDEEESKSTKEPEEPEESEKANEKTSGRQ 1117
Query: 152 VVV-RPDKKELLSKVEKSSRKRIPSQDAIAIVR 183
+ + D K+ K ++ + P+++ V+
Sbjct: 1118 TPIAKKDSKDSDQKKSETKENQSPTKNQDEKVK 1150
>gi|114776329|ref|ZP_01451374.1| hypothetical protein SPV1_01377 [Mariprofundus ferrooxydans PV-1]
gi|114553159|gb|EAU55557.1| hypothetical protein SPV1_01377 [Mariprofundus ferrooxydans PV-1]
Length = 264
Score = 39.7 bits (91), Expect = 0.47, Method: Composition-based stats.
Identities = 23/128 (17%), Positives = 50/128 (39%), Gaps = 11/128 (8%)
Query: 141 ISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFK 200
S ++ + RP+ +L K +S K IA+++ V +W +P+ F
Sbjct: 146 SSSTDRSATHAQTTRPELADLAGKQLSTSEKERY----IALMQAAVQEHWKVPASSGTFT 201
Query: 201 KLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPSTYKSWR 260
+ +L G + ++ G +L + +A+ + F++ ++ +R
Sbjct: 202 DPL--VEMKLLPNGDIASVKILESSGSA-----LLDASLVRAIQAAAPFQVPAQQFEFFR 254
Query: 261 NITLFFVP 268
L F P
Sbjct: 255 VNNLRFHP 262
>gi|302797046|ref|XP_002980284.1| hypothetical protein SELMODRAFT_112712 [Selaginella moellendorffii]
gi|300151900|gb|EFJ18544.1| hypothetical protein SELMODRAFT_112712 [Selaginella moellendorffii]
Length = 566
Score = 39.3 bits (90), Expect = 0.52, Method: Composition-based stats.
Identities = 44/242 (18%), Positives = 91/242 (37%), Gaps = 33/242 (13%)
Query: 4 ENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNE-DYHSSKYKKI----- 57
E L++ I+ ++ LL + + N +L PI S+ +Y+E + S Y+ +
Sbjct: 336 EEYLSVKEII-LLNLLKVISHHNARLATPIR-----SIQRVYDEAETRQSPYRNVLLGAA 389
Query: 58 -EEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESA-L 115
E+P + S ++ ++ + DQ + EN + G+QA+K+S+
Sbjct: 390 FEKPPAKISEVSADSGGEPATI-----KAEDQKSSETGENTKQHL----GKQAIKDSSKP 440
Query: 116 LRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRI-- 173
+ SP + K K + +QG + E + + +EL +K + K
Sbjct: 441 PKASTSPKEPPASPKREIKLEAIQGTNNEELLAKKSPPTTKSTEELQAKKFPPTTKSTGQ 500
Query: 174 PSQDAIAIVRNRVIANW---NIPSDFKRFKKLRVKMHFQLNQKGFVLGKIN----VDVVG 226
S + ++ AN+ N+ R + + + G + + G
Sbjct: 501 GSNNEEQQLKKSPPANFGEDNLVLGVALAGSKR-TLSLSGDGDDKITGDSDTRGAITAAG 559
Query: 227 GT 228
Sbjct: 560 SP 561
>gi|67904142|ref|XP_682327.1| hypothetical protein AN9058.2 [Aspergillus nidulans FGSC A4]
gi|40742701|gb|EAA61891.1| hypothetical protein AN9058.2 [Aspergillus nidulans FGSC A4]
Length = 1537
Score = 39.3 bits (90), Expect = 0.52, Method: Composition-based stats.
Identities = 20/118 (16%), Positives = 48/118 (40%), Gaps = 12/118 (10%)
Query: 97 ETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATN-----------KEQDLQGISFAE 145
++ SS+S+ + A + + + V+P ++++++K + K+ + A+
Sbjct: 1034 QSSNSSTSRDDGAASSGSPMSINVTPAEEERVTKTISPPPLTTSVEPVKDWSERATPRAQ 1093
Query: 146 KK-SIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKL 202
+ D RP K L E PS IA ++ ++ W++ + +
Sbjct: 1094 TRHDFDENDRRPLSKNLEDIPEVGHFPETPSLSEIAALQAALVECWSLCNTLATLSSI 1151
>gi|331000273|ref|ZP_08323957.1| protein TolA [Parasutterella excrementihominis YIT 11859]
gi|329572439|gb|EGG54092.1| protein TolA [Parasutterella excrementihominis YIT 11859]
Length = 399
Score = 39.3 bits (90), Expect = 0.52, Method: Composition-based stats.
Identities = 33/189 (17%), Positives = 68/189 (35%), Gaps = 20/189 (10%)
Query: 88 QTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKK 147
+ + A + E K+ + + + +E A ++ +K+K + N+++ + + A +K
Sbjct: 220 EAERKAKQEELKKQAQERERKIAEEKAQREKALA--EKRKAQEELNRQRAQEQANAARRK 277
Query: 148 SIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIAN------WNIPSDFKRFKK 201
++ R + + S Q NR++A +N P+ KR
Sbjct: 278 ---EMLSRLTGQSGSAMGSGSGAMTNFQQAQYN---NRIVACIRPHITFNTPAGAKRGMY 331
Query: 202 LRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPSTYKSWRN 261
+ K +L + G + G + KA++ F P +
Sbjct: 332 V-AKFDVRLLKNGQKAVPPKMISSSG----LKAFDTAVEKAILMCNPFPKPPVG-DIPSS 385
Query: 262 ITLFFVPSK 270
ITL F P
Sbjct: 386 ITLTFDPVD 394
>gi|198454599|ref|XP_001359640.2| GA16214 [Drosophila pseudoobscura pseudoobscura]
gi|198132868|gb|EAL28790.2| GA16214 [Drosophila pseudoobscura pseudoobscura]
Length = 1499
Score = 39.3 bits (90), Expect = 0.60, Method: Composition-based stats.
Identities = 24/141 (17%), Positives = 44/141 (31%), Gaps = 4/141 (2%)
Query: 72 LVRDFSVQENGDRFSDQTKTHATENETK-RSSSSKGEQALKESA---LLRMPVSPYDKQK 127
+S N +R + T K S + + AL E++ R+ QK
Sbjct: 710 GAAHYSNMPNQERSLEFNDTFLDYEHLKGSFPSYELKCALPENSRLPPYRLIFEDVPVQK 769
Query: 128 ISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVI 187
S KE++ Q + A KSI + + + + + I +R +
Sbjct: 770 DSDGEEKEKNEQELEAAVSKSIVVQPYKYEARGPYPSDKPKQNTIRFTPTQIEAIRAGMQ 829
Query: 188 ANWNIPSDFKRFKKLRVKMHF 208
+ K V +
Sbjct: 830 PGLTLVVGPPGTGKTDVAVQI 850
>gi|90418653|ref|ZP_01226564.1| possible energy transducer for iron transport, TonB [Aurantimonas
manganoxydans SI85-9A1]
gi|90336733|gb|EAS50438.1| possible energy transducer for iron transport, TonB [Aurantimonas
manganoxydans SI85-9A1]
Length = 156
Score = 39.3 bits (90), Expect = 0.60, Method: Composition-based stats.
Identities = 24/145 (16%), Positives = 52/145 (35%), Gaps = 9/145 (6%)
Query: 110 LKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSS 169
+ + ++ + +K++ K Q ++ + ++ + P K ++ S
Sbjct: 6 FRPTPPPKVRQAVREKKQEIKPRKPRQKVERKT--PRRQVKKAAPPPSTATKGRKQQQVS 63
Query: 170 RKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKL-RVKMHFQLNQKGFVLGKINVDVVGGT 228
+ S+ A+ RN V A N R V + F+++ G V V
Sbjct: 64 QGARVSRSALTSWRNAVQARLNRYKRSPRGGGSGTVTVSFRMDGNG------RVTSVRVA 117
Query: 229 ELVRRMLRENARKAVIKSQAFRLSP 253
R+L + A + ++ F P
Sbjct: 118 GSAGRILDDAAVSLLRRASPFPAPP 142
>gi|195396041|ref|XP_002056641.1| GJ11052 [Drosophila virilis]
gi|194143350|gb|EDW59753.1| GJ11052 [Drosophila virilis]
Length = 964
Score = 39.3 bits (90), Expect = 0.61, Method: Composition-based stats.
Identities = 27/111 (24%), Positives = 44/111 (39%), Gaps = 9/111 (8%)
Query: 36 REMLSVDNIYNEDYHSSKYKKIEEPVVQFK---GSSQENLVRDFSVQENGDRFSDQTKTH 92
RE E+ SSK K +E K +++ + QE K
Sbjct: 297 RERSGEKPSGKEEKSSSKIKHEQEEKSSLKIKHEREEKSSSKIEHEQEEKSNS----KIK 352
Query: 93 ATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISF 143
+TK S++S+GE ALK R +SP K++ + + + + IS
Sbjct: 353 PEPGQTKSSNTSEGEHALKVKPQPR--ISPKIKKEPNNNVDAAKTEEDISS 401
>gi|303258202|ref|ZP_07344209.1| protein TolA [Burkholderiales bacterium 1_1_47]
gi|302858955|gb|EFL82039.1| protein TolA [Burkholderiales bacterium 1_1_47]
Length = 399
Score = 39.3 bits (90), Expect = 0.64, Method: Composition-based stats.
Identities = 32/189 (16%), Positives = 67/189 (35%), Gaps = 20/189 (10%)
Query: 88 QTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKK 147
+ + A + E K+ + + + +E A ++ +K+K + N+++ + + +K
Sbjct: 220 EAERKAKQEELKKQAQERERKIAEEKAQREKALA--EKRKAQEELNRQRAQEQANAVRRK 277
Query: 148 SIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIAN------WNIPSDFKRFKK 201
++ R + + S Q NR++A +N P+ KR
Sbjct: 278 ---EMLSRLTGQSGSAMGSGSGAMTNFQQAQYN---NRIVACIRPHITFNTPAGAKRGMY 331
Query: 202 LRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPSTYKSWRN 261
+ K +L + G + G + KA++ F P +
Sbjct: 332 V-AKFDVRLLKNGQKAVPPKMISSSG----LKAFDTAVEKAILMCNPFPKPPVG-DIPSS 385
Query: 262 ITLFFVPSK 270
ITL F P
Sbjct: 386 ITLTFDPVD 394
>gi|297817318|ref|XP_002876542.1| hypothetical protein ARALYDRAFT_907545 [Arabidopsis lyrata subsp.
lyrata]
gi|297322380|gb|EFH52801.1| hypothetical protein ARALYDRAFT_907545 [Arabidopsis lyrata subsp.
lyrata]
Length = 1733
Score = 38.9 bits (89), Expect = 0.68, Method: Composition-based stats.
Identities = 29/167 (17%), Positives = 69/167 (41%), Gaps = 14/167 (8%)
Query: 32 PISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKT 91
P+S + D+ ++ HS+ P+ + S+ + + + +
Sbjct: 745 PVSEKLAEVTDDTSSDLPHSTHILSSTVPLGHSETLSKHHGIENSGDSLTSAPATLSKDK 804
Query: 92 HATENETKRSSSSKGEQALKE----------SALLRMPVS-PYDKQKISKATNKEQDLQ- 139
A E T+R++S+KG++ +KE ++ L M P +K++ S N + +
Sbjct: 805 SAFEINTRRNTSTKGKKKIKEILQKADAAGTTSDLYMAYKGPEEKKESSNVVNDVSNQKL 864
Query: 140 --GISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRN 184
I A + ++D V+ + ++ + S+ K + +++ R
Sbjct: 865 APAIPQAVEATVDAEPVKNEPEDWEDAADVSTPKLETADNSVNAKRG 911
>gi|67484124|ref|XP_657282.1| hypothetical protein [Entamoeba histolytica HM-1:IMSS]
gi|56474538|gb|EAL51903.1| hypothetical protein, conserved [Entamoeba histolytica HM-1:IMSS]
Length = 1144
Score = 38.9 bits (89), Expect = 0.73, Method: Composition-based stats.
Identities = 24/120 (20%), Positives = 53/120 (44%), Gaps = 3/120 (2%)
Query: 34 SRREMLSVDNIYNEDYHSSKYKKI-EEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTH 92
++ E + YN++ +S K++ + ++ +Q V ++E +++ Q++ +
Sbjct: 237 NKIEQTPKQDNYNDEINSIKHQNELSQKKIEEIEKTQNEFVSMKQLEEITNKYLSQSEFN 296
Query: 93 ATENETKRSSSSKGEQALKESALLRMPVSPYD--KQKISKATNKEQDLQGISFAEKKSID 150
+ E K +K + LKE + D K+ I N+E +S +K+ ID
Sbjct: 297 KIQEELKEIKDNKMVKELKEQMSEFITKKEMDKIKKDIISNNNEEDINHELSKLQKRIID 356
>gi|254563127|ref|YP_003070222.1| hypothetical protein METDI4787 [Methylobacterium extorquens DM4]
gi|254270405|emb|CAX26403.1| hypothetical protein METDI4787 [Methylobacterium extorquens DM4]
Length = 97
Score = 38.9 bits (89), Expect = 0.76, Method: Composition-based stats.
Identities = 13/60 (21%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
Query: 197 KRFKKLRVKMHFQLNQKGFVLGKINVDV--VGGTELVRRMLRENARKAVIKSQAFRLSPS 254
+ ++ F LN+ G + G V + G + R+ E A +A+ + R++P+
Sbjct: 3 ADTEGSQIAFRFGLNKTGGMRGPPLVTSRQLKGDQEARKRFEEAAFEALSRCFPMRITPA 62
>gi|115916147|ref|XP_001198999.1| PREDICTED: similar to BCL3 [Strongylocentrotus purpuratus]
gi|115974409|ref|XP_001183754.1| PREDICTED: similar to BCL3 [Strongylocentrotus purpuratus]
Length = 814
Score = 38.9 bits (89), Expect = 0.79, Method: Composition-based stats.
Identities = 32/180 (17%), Positives = 61/180 (33%), Gaps = 21/180 (11%)
Query: 31 VPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVR-----DFSVQENGDRF 85
V ++ + SV +E YH + + +E Q GS ++ + + + +
Sbjct: 391 VAVAEVDKRSVKIGEDEKYHYAVIPRTKEVTQQSTGSKVKSTPDVVPKIEITSPQPATKT 450
Query: 86 SDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAE 145
Q+K+ + + G+ L M +SP D N L+ +
Sbjct: 451 EAQSKSEGNQKPVNKPIEKDGK--------LVMSISPSDSYTHQLVINVNGHLRTVPLKA 502
Query: 146 K--KSIDT------VVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFK 197
K+ID V + P K KV+ S + + +I++ I D
Sbjct: 503 DNPKAIDKKVPQGGVPIAPKVKTPPRKVDDKEPTSSLSFSEHSAMEAALISSALIAPDIA 562
>gi|74001821|ref|XP_859964.1| PREDICTED: similar to protein tyrosine phosphatase, non-receptor type
13 isoform 3 isoform 4 [Canis familiaris]
Length = 2299
Score = 38.9 bits (89), Expect = 0.80, Method: Composition-based stats.
Identities = 20/108 (18%), Positives = 40/108 (37%), Gaps = 4/108 (3%)
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKG---EQALKE-SALLRM 118
K SSQ V + + + + K + + S S G E +K + + M
Sbjct: 1426 NSKDSSQPTCVEQGTSSDENEMYDKSKKQCTSPSRRNSYSDSSGSGEEDLVKALTKIPNM 1485
Query: 119 PVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVE 166
S Q +S ++ Q +++ +I T+ P + ++E
Sbjct: 1486 SWSSSLHQTLSNVVSQAQSQHEAPKSQEDTICTMFYYPQEIPSKPELE 1533
>gi|224089221|ref|XP_002190846.1| PREDICTED: similar to KIAA1281 protein [Taeniopygia guttata]
Length = 1503
Score = 38.9 bits (89), Expect = 0.81, Method: Composition-based stats.
Identities = 19/96 (19%), Positives = 32/96 (33%), Gaps = 3/96 (3%)
Query: 59 EPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRM 118
+P +FK + Q ++ DQ K ++E K S + KES+ +
Sbjct: 1220 DPTTRFKQDPDSRTWHHYVYQ---PKYLDQQKPEELDHEKKLKEDSPRKTPNKESSPPNL 1276
Query: 119 PVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVV 154
PVS ++ K + K V
Sbjct: 1277 PVSLASIKEEPKEVKRSDSQSVDESKIKNDDQKTPV 1312
>gi|83315515|ref|XP_730826.1| serine/threonine-protein kinase [Plasmodium yoelii yoelii str.
17XNL]
gi|23490671|gb|EAA22391.1| serine/threonine-protein kinase [Plasmodium yoelii yoelii]
Length = 408
Score = 38.6 bits (88), Expect = 0.86, Method: Composition-based stats.
Identities = 27/136 (19%), Positives = 55/136 (40%), Gaps = 12/136 (8%)
Query: 35 RREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHAT 94
++ + Y +++S ++ + K + N + DF D K
Sbjct: 106 KKTTFPFKSNYISKFYNSVINQVSPEITYDKNKTDNNKIHDF----------DNKKRETL 155
Query: 95 ENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVV 154
E +++ K E K + + + Y K+ +K NK+ + KK+I +VV
Sbjct: 156 CKEKNKNTHLKYEIIKKINLFINN--NDYKKENHTKIKNKKDCTLDNNGLHKKNIIQLVV 213
Query: 155 RPDKKELLSKVEKSSR 170
+ KEL SK+ + ++
Sbjct: 214 KIKHKELYSKINECNK 229
>gi|74001825|ref|XP_535644.2| PREDICTED: similar to protein tyrosine phosphatase, non-receptor type
13 isoform 2 isoform 2 [Canis familiaris]
Length = 2471
Score = 38.6 bits (88), Expect = 0.88, Method: Composition-based stats.
Identities = 20/108 (18%), Positives = 40/108 (37%), Gaps = 4/108 (3%)
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKG---EQALKE-SALLRM 118
K SSQ V + + + + K + + S S G E +K + + M
Sbjct: 1598 NSKDSSQPTCVEQGTSSDENEMYDKSKKQCTSPSRRNSYSDSSGSGEEDLVKALTKIPNM 1657
Query: 119 PVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVE 166
S Q +S ++ Q +++ +I T+ P + ++E
Sbjct: 1658 SWSSSLHQTLSNVVSQAQSQHEAPKSQEDTICTMFYYPQEIPSKPELE 1705
>gi|68066813|ref|XP_675380.1| calcium/calmodulin-dependent protein kinase [Plasmodium berghei
strain ANKA]
gi|56494532|emb|CAH97489.1| calcium/calmodulin-dependent protein kinase, putative [Plasmodium
berghei]
Length = 458
Score = 38.6 bits (88), Expect = 0.88, Method: Composition-based stats.
Identities = 27/130 (20%), Positives = 53/130 (40%), Gaps = 14/130 (10%)
Query: 42 DNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTK-THATENETKR 100
+ Y ++S ++ + K + N + DF ++ +Q K TH K+
Sbjct: 109 KSNYISKIYNSVINQVSPEITHDKNKTDNNEIHDFDNKKRETLCKEQNKNTHLKYEIIKK 168
Query: 101 SSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKE 160
+ L + + Y K+ +K NK+ + KK+I +VV+ KE
Sbjct: 169 IN-------------LFINNNDYKKENNTKIKNKKDRTLDNNGLYKKNIIQLVVKIKHKE 215
Query: 161 LLSKVEKSSR 170
L SK+ + ++
Sbjct: 216 LYSKINECNK 225
>gi|74001827|ref|XP_849893.1| PREDICTED: similar to Tyrosine-protein phosphatase, non-receptor type
13 (Protein-tyrosine phosphatase 1E) (PTP-E1) (hPTPE1)
(PTP-BAS) (Protein-tyrosine phosphatase PTPL1)
(Fas-associated protein-tyrosine phosphatase 1) (FAP-1)
isoform 3 [Canis familiaris]
Length = 2490
Score = 38.6 bits (88), Expect = 0.90, Method: Composition-based stats.
Identities = 20/108 (18%), Positives = 40/108 (37%), Gaps = 4/108 (3%)
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKG---EQALKE-SALLRM 118
K SSQ V + + + + K + + S S G E +K + + M
Sbjct: 1617 NSKDSSQPTCVEQGTSSDENEMYDKSKKQCTSPSRRNSYSDSSGSGEEDLVKALTKIPNM 1676
Query: 119 PVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVE 166
S Q +S ++ Q +++ +I T+ P + ++E
Sbjct: 1677 SWSSSLHQTLSNVVSQAQSQHEAPKSQEDTICTMFYYPQEIPSKPELE 1724
>gi|194208323|ref|XP_001915626.1| PREDICTED: microfibrillar-associated protein 3-like [Equus
caballus]
Length = 409
Score = 38.6 bits (88), Expect = 0.99, Method: Composition-based stats.
Identities = 26/129 (20%), Positives = 46/129 (35%), Gaps = 23/129 (17%)
Query: 55 KKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRS----SSSKGE--Q 108
+ I E +++ G +E G +D+ + + N KRS + S G
Sbjct: 251 RTIMEEIMEVVGL-EEQGQNFVRHTPEGQEAADRDEVYMIPNSLKRSDSPTADSDGSSLH 309
Query: 109 ALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKS 168
+ +++ + P K+ D +GI F K D++E E+S
Sbjct: 310 EQPQQIAIKVSIHPQSKKDHM------DDQEGIPFEVK----------DEEETEPSAERS 353
Query: 169 SRKRIPSQD 177
PS D
Sbjct: 354 PETAEPSTD 362
>gi|260833074|ref|XP_002611482.1| hypothetical protein BRAFLDRAFT_63883 [Branchiostoma floridae]
gi|229296853|gb|EEN67492.1| hypothetical protein BRAFLDRAFT_63883 [Branchiostoma floridae]
Length = 3199
Score = 38.6 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 32/207 (15%), Positives = 73/207 (35%), Gaps = 18/207 (8%)
Query: 45 YNEDYHSSKYKKIEEPVVQFKGSSQENLV--RDFSVQENGDRFSD-----QTKTHATENE 97
+ E + +K ++PVV+ + +Q + Q+ D D QT ++T
Sbjct: 1243 HQEQGKGKEQEKEKQPVVKGREMAQARPADIKAKEDQKKVDPNVDATEKTQTAEYSTPLS 1302
Query: 98 TKRSSSSKGEQALKESALLRM-----PVSPYDKQKISKATNKEQDLQGISFAEKKSIDTV 152
+ S+ + A++ S + D+ K + + Q ++ + + +
Sbjct: 1303 VEESTKEENTCAIENSTPPVVVTVSEAKRDNDEDKYAPDESSTQSVEPVPTVQSDR-EKK 1361
Query: 153 VVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQL-- 210
+KE SK + + + +P ++ N + P +R M F
Sbjct: 1362 PEGEKRKEDDSKDQPKASQPVPLPMLFTARPRQLTGNVSRP--LPVLPMVR-SMTFGSVE 1418
Query: 211 NQKGFVLGKINVDVVGGTELVRRMLRE 237
+ G + V G +++ +E
Sbjct: 1419 DDDGSFPLPERLVVSAGNSPIKKPAKE 1445
>gi|206889867|ref|YP_002249452.1| protein TonB, putative [Thermodesulfovibrio yellowstonii DSM 11347]
gi|206889958|ref|YP_002249402.1| protein TonB, putative [Thermodesulfovibrio yellowstonii DSM 11347]
gi|206741805|gb|ACI20862.1| protein TonB, putative [Thermodesulfovibrio yellowstonii DSM 11347]
gi|206741896|gb|ACI20953.1| protein TonB, putative [Thermodesulfovibrio yellowstonii DSM 11347]
Length = 249
Score = 38.6 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 29/146 (19%), Positives = 59/146 (40%), Gaps = 17/146 (11%)
Query: 124 DKQKISKAT-NKEQDLQGISFAEKKS---IDTVVVRPDKKELLSKVE-KSSRKRIPSQDA 178
DKQK + +T N + + K+S D V+ ++ K E ++SR S
Sbjct: 89 DKQKETASTGNLKTEKHFTELTPKQSPNIFDKDVIARLSRKSKEKQELETSRGLSFSAKE 148
Query: 179 ------IAIVRNRVIANWNIPSDFKRFKKL-RVKMHFQLNQKGFVLGKINVDVVGGTELV 231
+ ++ ++ W P + + + F +++KG ++ + G
Sbjct: 149 FNDWGYLERLKEKIERVWQYPPQAAQRGIYGDLYLRFTIDKKGKLVSVELLRTSG----- 203
Query: 232 RRMLRENARKAVIKSQAFRLSPSTYK 257
RML + A KA+ ++ F P ++
Sbjct: 204 YRMLDDAAIKALKDAEPFWPLPDDWQ 229
>gi|150864157|ref|XP_001382871.2| poly(A)-binding protein binding protein [Scheffersomyces stipitis
CBS 6054]
gi|149385413|gb|ABN64842.2| poly(A)-binding protein binding protein [Scheffersomyces stipitis
CBS 6054]
Length = 637
Score = 38.6 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 35/170 (20%), Positives = 69/170 (40%), Gaps = 17/170 (10%)
Query: 37 EMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATEN 96
E V+ Y+E ++++ P + + E L R+ DR + + ++
Sbjct: 157 EKFGVEASYDEHLYTTRINT-SAPDYHERVAKAEKLAREIESSATTDRHILEERGLQVDD 215
Query: 97 ----ETKRSS--SSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSID 150
E + S +G++ + +AL +S ++ +K +D+ G+S A K + +
Sbjct: 216 SGIDEEDKYSGVDRRGDELM--AALRNASISNDTQKPETKVP---EDVAGVSVA-KAAKN 269
Query: 151 TVVVRPDKKELLSKVEKSSRKRIP---SQDAIAIVRNRVIANWNIPSDFK 197
TV V+PD +V + +Q I +R AN+ IP
Sbjct: 270 TVPVKPDSIPAKPQVSQQPHNESFRLNAQSEINSLR-EFSANFKIPHKMP 318
>gi|291540162|emb|CBL13273.1| Relaxase/Mobilisation nuclease domain [Roseburia intestinalis
XB6B4]
Length = 456
Score = 38.2 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 28/163 (17%), Positives = 58/163 (35%), Gaps = 36/163 (22%)
Query: 47 EDYHSSKYKKIEEPVVQFKGSSQ------------------ENLVRDFSVQENGDRFSDQ 88
++ +KY ++ + S + S Q NG + Q
Sbjct: 117 DNIEHNKYHDCKQSYYHIRKLSDDLCKEHNLSIIIPGGERGKKYKEWQSDQ-NGSTWKTQ 175
Query: 89 TK---------THATENET----KRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKE 135
+ E+ + KGE + +ESA + P DK++ + + K
Sbjct: 176 LRRDINFCIKSASTYEDFLLLMRAKGYEIKGE-SFEESAAKYISFRPLDKERFVRGSAKS 234
Query: 136 QDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDA 178
+ ++ I+ V+ ++K ++ K + SSR+ I + D
Sbjct: 235 LGKEYTKERIRERIE---VKRERKTVIPKKDYSSRRLIDTSDE 274
>gi|327272566|ref|XP_003221055.1| PREDICTED: transcription factor 20-like [Anolis carolinensis]
Length = 1958
Score = 38.2 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 21/84 (25%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
Query: 98 TKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPD 157
+RS SS E + E +M +P D++++ ++++ L + K + TV V
Sbjct: 548 LERSQSSPVEASQNE--PPKMSATPADEEEVVSPPDEKEALTAVETPPKVNEKTVGVIVS 605
Query: 158 KKELLSKVEKSSRKRIPSQDAIAI 181
++ + ++EKSS + P QD ++
Sbjct: 606 REAMTGRIEKSSGQDKPQQDDVSA 629
>gi|268680681|ref|YP_003305112.1| TonB family protein [Sulfurospirillum deleyianum DSM 6946]
gi|268618712|gb|ACZ13077.1| TonB family protein [Sulfurospirillum deleyianum DSM 6946]
Length = 201
Score = 38.2 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 34/164 (20%), Positives = 63/164 (38%), Gaps = 8/164 (4%)
Query: 92 HATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDT 151
E R EQ L E + ++ + QK + E+ + + K+ +
Sbjct: 28 QEILQELPRKIKPIVEQKL-EKKVPKVSAKTFPIQKPIQELVVEKTIHS-NVPIKEQAEV 85
Query: 152 VVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFK-KLRVKMHFQL 210
+ V P +E + S RK +A VR+++ + PS K+ + + F +
Sbjct: 86 LPVTPKAQEAPMRTTLSKRKDDLLLVYLAKVRDKIQESLRYPSAAKKMGIEGETVVQFLI 145
Query: 211 NQKGFVLG-KINVDVVGGTELVRRMLRENARKAVIKSQAFRLSP 253
+ G V I + G + +L NA AV+++ F P
Sbjct: 146 HTNGMVDATSIKIAKSSG----KVLLDRNAIDAVLEAVPFEFPP 185
>gi|116748200|ref|YP_844887.1| TonB family protein [Syntrophobacter fumaroxidans MPOB]
gi|116697264|gb|ABK16452.1| TonB family protein [Syntrophobacter fumaroxidans MPOB]
Length = 317
Score = 38.2 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 22/91 (24%), Positives = 38/91 (41%), Gaps = 7/91 (7%)
Query: 182 VRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARK 241
V+N + + W+I K +L ++ +++ G VL + V+ G L +
Sbjct: 232 VKNAINSQWSILDSLK-STRLEARLLIAVSRDGRVL-DLQVEKPSGNGLFDEACV----R 285
Query: 242 AVIKSQAFRLSPSTYKSWR-NITLFFVPSKM 271
AV K+ P TY S R + F P +
Sbjct: 286 AVRKAAPLPPIPETYTSPRIEFVINFRPEGL 316
>gi|152982653|ref|YP_001354156.1| TolA-related transport transmembrane protein [Janthinobacterium sp.
Marseille]
gi|151282730|gb|ABR91140.1| TolA-related transport transmembrane protein [Janthinobacterium sp.
Marseille]
Length = 292
Score = 38.2 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 12/78 (15%), Positives = 27/78 (34%), Gaps = 10/78 (12%)
Query: 180 AIVRNRVIAN--WNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRE 237
+R ++ N + +P + +L G + G+ + G +
Sbjct: 206 DKIRAKIRQNTTFIVPDGLSGNPAAEFDV--ELLPDGSLRGEPRLRKSSGVTGF----DD 259
Query: 238 NARKAVIKSQAFRLSPST 255
++A+ +SQ F P
Sbjct: 260 AVKRAIERSQPF--PPDK 275
>gi|309803088|ref|ZP_07697186.1| Gram-positive signal peptide protein, YSIRK family [Lactobacillus
iners LactinV 11V1-d]
gi|308164834|gb|EFO67083.1| Gram-positive signal peptide protein, YSIRK family [Lactobacillus
iners LactinV 11V1-d]
Length = 1551
Score = 38.2 bits (87), Expect = 1.4, Method: Composition-based stats.
Identities = 29/186 (15%), Positives = 67/186 (36%), Gaps = 22/186 (11%)
Query: 79 QENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDL 138
+E +R + + E+E + S SK + +KE K + K T +
Sbjct: 112 EEARNRIESKQAVYDLEDELSQVSESKRAELIKELQQPLSTEQRKQKVQEIKKTINKIVQ 171
Query: 139 QGISFAEKKSIDTV-----VVRPDKKELLSKV----EKSSRKRIPSQDAIAIVRNRVI-- 187
+ A+K++ D V ++ PDK +K+ K + I Q + ++
Sbjct: 172 DTLPSAKKEAHDKVQKMENLIDPDKIPYYNKIKQAKNKKELREIEQQAELEALKKETSDY 231
Query: 188 -----ANWNIPSDFKRFKKLRVK--MHFQLNQKGFVLGKINVDVVGGTE----LVRRMLR 236
N++ ++ + K + +L+ + ++ ++ + +
Sbjct: 232 ITLQYNNYHSNAELDDRQNQEYKNWANKRLDLYAKIALHPETELSSESDKHDFNKLKAVL 291
Query: 237 ENARKA 242
AR+A
Sbjct: 292 AYARRA 297
>gi|118370253|ref|XP_001018328.1| hypothetical protein TTHERM_00753290 [Tetrahymena thermophila]
gi|89300095|gb|EAR98083.1| hypothetical protein TTHERM_00753290 [Tetrahymena thermophila
SB210]
Length = 3493
Score = 37.8 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 24/164 (14%), Positives = 55/164 (33%), Gaps = 14/164 (8%)
Query: 21 LYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQE 80
L NFN ++L ++ + L S Y+ +E + K ++N + V
Sbjct: 761 LCLNFNEEILSEATKIKYLI----------SPSYQNEQEKLKSKKEDLEKNAKLNCQVFY 810
Query: 81 NGDRFSDQTKTHATENETKR---SSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQD 137
R+ +Q T + T R + + L S+ + + + N+
Sbjct: 811 REKRYQNQMPTQFIIDSTDRVHLFHQEENSKTLHLSSFQNFHLMHLIEHNPVEQRNRANS 870
Query: 138 LQGISFAEKKSIDTVVVRPDKKELLSK-VEKSSRKRIPSQDAIA 180
+K++ + + + + L K E + + +
Sbjct: 871 EIPNIQIIQKNLSQKIQKEEIELSLDKDQEIKQQADQKKESELD 914
>gi|71660394|ref|XP_821914.1| mucin-associated surface protein (MASP) [Trypanosoma cruzi strain
CL Brener]
gi|70887304|gb|EAO00063.1| mucin-associated surface protein (MASP), putative [Trypanosoma
cruzi]
Length = 317
Score = 37.8 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 19/124 (15%), Positives = 45/124 (36%), Gaps = 1/124 (0%)
Query: 47 EDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKG 106
+D ++ E + K ++E++V ++N T T + ++
Sbjct: 175 DDMPGPNSEETSESMKTTKDLAEEDIVTTADTKQNEASNGQTEATTKTPPQASDDDDNET 234
Query: 107 EQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVE 166
++ E P S + + + NK + + + I TV +PD + + V
Sbjct: 235 DKGTGEDTPNNAPESDVSETEENHDENKGNNSKETP-VQVAGIKTVTAKPDDSDGSTAVS 293
Query: 167 KSSR 170
++
Sbjct: 294 HTTS 297
>gi|301764072|ref|XP_002917458.1| PREDICTED: cortactin-binding protein 2-like [Ailuropoda melanoleuca]
Length = 1595
Score = 37.8 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 28/118 (23%), Positives = 45/118 (38%), Gaps = 13/118 (11%)
Query: 37 EMLSVDNI----YNEDYHSSKYKKIE---------EPVVQFKGSSQENLVRDFSVQENGD 83
E + + I YN + SK K +E E + + +LVR+ +
Sbjct: 1476 EGIKIKAISQLNYNRNASLSKQKSLENDLSLTLNLEQRLSLSSDDEADLVRELQSMCSSK 1535
Query: 84 RFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGI 141
SD +K + ++ +R SS A + RMPVSP Q + + Q I
Sbjct: 1536 SESDISKIADSRDDLRRFDSSGNNPAFSATVNPRMPVSPKVSQSSQQPSTDRMQQQSI 1593
>gi|37522975|ref|NP_926352.1| hypothetical protein gll3406 [Gloeobacter violaceus PCC 7421]
gi|35213978|dbj|BAC91347.1| gll3406 [Gloeobacter violaceus PCC 7421]
Length = 519
Score = 37.8 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 21/90 (23%), Positives = 39/90 (43%), Gaps = 9/90 (10%)
Query: 179 IAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLREN 238
+A ++ +V NW I + + R + F +++ G ++ + V R E+
Sbjct: 425 MAALQRKVKRNW-IAPEAGNSR--RTVLLFTISRNGQIM-NLRVGRS----SGSRSSDES 476
Query: 239 ARKAVIKSQAFRLSPSTYKSWR-NITLFFV 267
A +AV ++ F P+ YK R I F
Sbjct: 477 AMEAVQRAAPFGPLPAAYKGDRIEIQFTFD 506
>gi|300112857|ref|YP_003759432.1| protein TolA [Nitrosococcus watsonii C-113]
gi|299538794|gb|ADJ27111.1| protein TolA [Nitrosococcus watsonii C-113]
Length = 321
Score = 37.8 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 17/92 (18%), Positives = 30/92 (32%), Gaps = 7/92 (7%)
Query: 176 QDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRML 235
Q V+ RV W P + K+ +++ G V + V G R
Sbjct: 232 QRFTDQVKMRVERYWIRPPASQDSLKVSLQVEML--PSGEVR-NVKVTESSGD----RAF 284
Query: 236 RENARKAVIKSQAFRLSPSTYKSWRNITLFFV 267
+A+ AV K+ + + + F
Sbjct: 285 DSSAQAAVYKAAPLPVPSESAAAEELRVFNFD 316
>gi|118380621|ref|XP_001023474.1| Leucine Rich Repeat family protein [Tetrahymena thermophila]
gi|89305241|gb|EAS03229.1| Leucine Rich Repeat family protein [Tetrahymena thermophila SB210]
Length = 2323
Score = 37.8 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 33/149 (22%), Positives = 60/149 (40%), Gaps = 8/149 (5%)
Query: 37 EMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTK-THATE 95
+ + ++ + + K +EE V Q + SSQ N+ +D +N + F + K
Sbjct: 576 QKSDIQQSLDQSTYLNSKKNMEESVSQNQNSSQ-NIDQDTKNLQNSNHFKKEKKEIQCIN 634
Query: 96 NETKRSSSSKGEQALKESALLRMPV---SPYDKQKISKATNKEQDLQGISFAEKKSIDTV 152
E + ++ G Q K++ + + + ++ K N+ QD Q K D +
Sbjct: 635 EEEEEANLRDGNQ--KQNDIFQQKLFYEQAFESNLFKKKINQSQDQQQYESEAKILNDKL 692
Query: 153 VVRP-DKKELLSKVEKSSRKRIPSQDAIA 180
D++E K KS R SQ I
Sbjct: 693 NFSIIDEEEFSYKNLKSKRGENFSQIEID 721
>gi|328784796|ref|XP_624931.3| PREDICTED: hypothetical protein LOC552552 [Apis mellifera]
Length = 1352
Score = 37.8 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 42/236 (17%), Positives = 84/236 (35%), Gaps = 30/236 (12%)
Query: 25 FNVQLLVPISRREMLSVDNIYNEDYHS-------SKYKKIEEPVVQFKGSSQENLVRDFS 77
F+ +L I+ E++S + E H+ S ++K + + +++ + F
Sbjct: 973 FSQKLYRFINCVELVSPHHAARELVHTVRQGQIASLFQKSVKRKEHEQRRRRKSKAQFFE 1032
Query: 78 VQENGDRFSDQTKTHATENETKRSSSSKGEQAL------KESALLRMPVSPYDKQKISKA 131
+ + R + K E ++ S+ K E+ L +S MP SP +K +
Sbjct: 1033 MIQEIRRVQQEEKIETVSEEQEKISTVKKEEKLIKGRERSKSKSPLMPRSPKRSEKSRSS 1092
Query: 132 TNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVI--AN 189
TN G+S ++ ++P + L S + ++ + V R+
Sbjct: 1093 TNLSSSRLGLSPISLEA----PMKPREFTL-------SSTNLRARSPLETVGRRLSHGDG 1141
Query: 190 WNIPSDFK----RFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARK 241
+ P LR + + G I + GG R R A++
Sbjct: 1142 GSPPPRLGSHFGGSATLRPLAPTKSDSTGSTTPTIKGESTGGGAPTPRYARSPAKR 1197
>gi|242222117|ref|XP_002476789.1| predicted protein [Postia placenta Mad-698-R]
gi|220723924|gb|EED78015.1| predicted protein [Postia placenta Mad-698-R]
Length = 290
Score = 37.8 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 14/119 (11%), Positives = 34/119 (28%), Gaps = 8/119 (6%)
Query: 129 SKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIA 188
+A ++ L FA +I T+ +P +S ++ I ++ +
Sbjct: 140 IQAQSRGSRLHPSPFAAVSTIATLPSKPSGSRDPPSKPSTSEVERKAEAEITALQTELAK 199
Query: 189 NWNIPSDFKRFKKLRVKMHFQLNQKG-------FVLGKINVDVVGGTELVRRMLRENAR 240
+ PS + R + + + R + ++ R
Sbjct: 200 AKSAPSGAETPSS-RTTGKRRADADADGATSRTTKTSRPLTKAPSNDASKLRSIAKSGR 257
>gi|124804129|ref|XP_001347910.1| calcium-dependent protein kinase, putative [Plasmodium falciparum
3D7]
gi|23496163|gb|AAN35823.1| calcium-dependent protein kinase, putative [Plasmodium falciparum
3D7]
Length = 1617
Score = 37.4 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 34/174 (19%), Positives = 56/174 (32%), Gaps = 27/174 (15%)
Query: 42 DNIYNEDYHSSKYK-----KIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATEN 96
N+ N+DY+ KY EE V K S V + + E G K N
Sbjct: 939 RNMINKDYYEKKYNIKVNRNNEENGVDEKMLSVHGGVFNKNDFEYG------GKIKGIPN 992
Query: 97 ------------ETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFA 144
K + K E L+ + + + K+ K N ++D+ F
Sbjct: 993 FPLNIEFIKQNGRYKEKGNEKYENDLEVNIDQTLSRKMLENNKLKKQNNIDEDIMVTPFY 1052
Query: 145 EKKSIDTVVVRPDKKELLSKVEKSS----RKRIPSQDAIAIVRNRVIANWNIPS 194
K ID V+ + E ++ K I + ++ N +P
Sbjct: 1053 IKSKIDKVLKNNEIFEKSARATFQQFDVKNKNFLHFSEIESLIQKLCHNLELPP 1106
>gi|260949745|ref|XP_002619169.1| hypothetical protein CLUG_00328 [Clavispora lusitaniae ATCC 42720]
gi|238846741|gb|EEQ36205.1| hypothetical protein CLUG_00328 [Clavispora lusitaniae ATCC 42720]
Length = 678
Score = 37.4 bits (85), Expect = 2.3, Method: Composition-based stats.
Identities = 29/130 (22%), Positives = 52/130 (40%), Gaps = 11/130 (8%)
Query: 44 IYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSS 103
+ NED +S + I+ V+ Q+ + + + + ENET +SS
Sbjct: 324 VQNEDANSDEEGGIDGETVKTAEEDQKEVKEKIGIVSQEKDDENTPAQQSIENETSKSSD 383
Query: 104 SKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLS 163
S+ K L++P+S + +S KK++ D+ ELLS
Sbjct: 384 SENTSKNKTVRKLKVPISNV----------QFHQCTELSSLYKKNLIVFTPPDDEFELLS 433
Query: 164 -KVEKSSRKR 172
KVE+ ++
Sbjct: 434 YKVEQRRHQK 443
>gi|195583426|ref|XP_002081523.1| GD25670 [Drosophila simulans]
gi|194193532|gb|EDX07108.1| GD25670 [Drosophila simulans]
Length = 2639
Score = 37.4 bits (85), Expect = 2.3, Method: Composition-based stats.
Identities = 29/134 (21%), Positives = 50/134 (37%), Gaps = 3/134 (2%)
Query: 57 IEEPVVQF-KGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESAL 115
+ PV++ K QE + Q +D+ ++ K SSSK E +E +
Sbjct: 302 EQNPVIEIVKELEQETISEVVPAQNENQSSADEENPVENQSPVKEPSSSKDEPPAEEHSP 361
Query: 116 LRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPS 175
P KQ+ A NK+ D + ++ +S+ L K SS P
Sbjct: 362 -GPDQDPVVKQETPVAKNKQHDKEHNEASQAESLSGSDDPSSSGTLSKKRNHSSPANTPK 420
Query: 176 QD-AIAIVRNRVIA 188
+ I +++ V
Sbjct: 421 KSKEIEALQSSVPR 434
>gi|144897878|emb|CAM74742.1| hypothetical protein MGR_0039 [Magnetospirillum gryphiswaldense
MSR-1]
Length = 242
Score = 37.4 bits (85), Expect = 2.3, Method: Composition-based stats.
Identities = 24/130 (18%), Positives = 47/130 (36%), Gaps = 13/130 (10%)
Query: 135 EQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPS 194
E DL S +S +PD + K + +Q+ V +RV+ +W P+
Sbjct: 93 EGDLAEKSTPVSESQSPKPAQPDPVAAVP-APKQKKPAPVNQNERDWVLSRVLRHWRPPA 151
Query: 195 DFKRFKKLRVKMHFQLNQKGFVLGKIN-------VDVVGG-----TELVRRMLRENARKA 242
+ K + + ++ G + V+V G ++R + + A
Sbjct: 152 GLSAYDKADISLRVKVLADGHFSDIYDSRRRWNPVEVFDGYQTLPANAIQRRIIDAIYTA 211
Query: 243 VIKSQAFRLS 252
+ K+Q L
Sbjct: 212 IRKAQPLPLP 221
>gi|228987988|ref|ZP_04148093.1| Spore germination protein gerIA [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|228771735|gb|EEM20196.1| Spore germination protein gerIA [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
Length = 678
Score = 37.4 bits (85), Expect = 2.3, Method: Composition-based stats.
Identities = 18/90 (20%), Positives = 32/90 (35%)
Query: 50 HSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQA 109
HS + + K + E + S Q N D+ Q + ++ S +
Sbjct: 88 HSKQDNSEQNQQQHSKQDNSEQDQQQHSKQNNSDQGQQQHSKQDISEQDQQQHSKQDNSE 147
Query: 110 LKESALLRMPVSPYDKQKISKATNKEQDLQ 139
+ + S D+Q+ SK N +Q Q
Sbjct: 148 QDQQQHSKQDNSEQDQQQHSKQNNSDQGQQ 177
>gi|170596940|ref|XP_001902952.1| hypothetical protein Bm1_57470 [Brugia malayi]
gi|158589044|gb|EDP28199.1| hypothetical protein Bm1_57470 [Brugia malayi]
Length = 727
Score = 37.4 bits (85), Expect = 2.4, Method: Composition-based stats.
Identities = 27/104 (25%), Positives = 46/104 (44%), Gaps = 6/104 (5%)
Query: 88 QTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKAT--NKEQDLQGISFAE 145
Q K A ++ +S G KE A L PV K++ S+ T KE+ +G E
Sbjct: 143 QKKQTALRTPVQKEKASLGTPVQKEKASLETPVQ---KEETSRGTPVQKEETSRGTPVQE 199
Query: 146 KKSIDTVVVRPDKKELLSKVEK-SSRKRIPSQDAIAIVRNRVIA 188
+++ V+ +K L + V+K + + P Q+ +R V
Sbjct: 200 EETSLRTPVQKEKASLETPVQKEETSRGTPVQEEETSLRTPVQK 243
Score = 35.9 bits (81), Expect = 6.5, Method: Composition-based stats.
Identities = 33/156 (21%), Positives = 59/156 (37%), Gaps = 24/156 (15%)
Query: 57 IEEPVVQFKGSSQENLVRDFSVQENGD--RFSDQTKTHATENETKRSSSSKGEQALKESA 114
+E + +E R VQE R Q + + E ++ +S+G +E
Sbjct: 176 QKEETSRGTPVQKEETSRGTPVQEEETSLRTPVQKEKASLETPVQKEETSRGTPVQEEET 235
Query: 115 LLRMPVS-------------------PYDKQKISKAT--NKEQDLQGISFAEKKSIDTVV 153
LR PV P K++ S+ T KE+ +G E+++
Sbjct: 236 SLRTPVQKEKASLETPVQKEKASLETPVQKEETSRGTPVQKEETSRGTPVQEEETSLRTP 295
Query: 154 VRPDKKELLSKVEK-SSRKRIPSQDAIAIVRNRVIA 188
V+ +K L + V+K + + P Q+ +R V
Sbjct: 296 VQKEKASLGTPVQKEETSRGTPVQEEETSLRTPVQK 331
>gi|116619650|ref|YP_821806.1| TonB family protein [Candidatus Solibacter usitatus Ellin6076]
gi|116222812|gb|ABJ81521.1| TonB family protein [Candidatus Solibacter usitatus Ellin6076]
Length = 263
Score = 37.4 bits (85), Expect = 2.4, Method: Composition-based stats.
Identities = 25/131 (19%), Positives = 42/131 (32%), Gaps = 10/131 (7%)
Query: 121 SPYDKQKISKATNKEQDLQG-ISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQ--- 176
P + S NK + Q + + T PD
Sbjct: 115 KPLKPSEASSQPNKWRAQQKELPNQVYSTAGTRASTPDFALQGGGGVGIGNNSPFGNQFG 174
Query: 177 DAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLR 236
I+RNRV W +D + V + F L++ G G + + G L
Sbjct: 175 AYADILRNRVAQYWK-TADIRAANNTIVGVTFVLHRDGSATG-VRITQKSGNSS----LD 228
Query: 237 ENARKAVIKSQ 247
+A++AV+ +
Sbjct: 229 ISAQRAVMDAS 239
>gi|152980914|ref|YP_001354653.1| hypothetical protein mma_2963 [Janthinobacterium sp. Marseille]
gi|151280991|gb|ABR89401.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille]
Length = 304
Score = 37.0 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 26/134 (19%), Positives = 46/134 (34%), Gaps = 21/134 (15%)
Query: 145 EKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKL-- 202
+SI+ RP K ++ S + + +++R+ N + K KKL
Sbjct: 167 ISRSIEEYNKRPKKTQVTP-----STREVGYAAYYKALQDRIEKNGTLNFPQKDGKKLYG 221
Query: 203 RVKMHFQLNQKGFV---LGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPS----- 254
++ ++ + Q G + G V+ G L + A V +S F P
Sbjct: 222 QLVVYIPIFQDGTIYMKEGGPRVERTSGNP----ALDQAALNIVRRSAPFGKFPENMRSV 277
Query: 255 -TYKSWRNITLFFV 267
W I F
Sbjct: 278 GKDDVW-EIITRFN 290
>gi|94501658|ref|ZP_01308174.1| hypothetical protein RED65_07354 [Oceanobacter sp. RED65]
gi|94426234|gb|EAT11226.1| hypothetical protein RED65_07354 [Oceanobacter sp. RED65]
Length = 498
Score = 37.0 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 43/230 (18%), Positives = 83/230 (36%), Gaps = 35/230 (15%)
Query: 47 EDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKG 106
+ Y+S Y +V ++++ F ++ R A E +++ +
Sbjct: 177 DRYNSLSYSGDRTAMVNSWIAAEKETAAAFQKEQQLKRARALAAKKAEEEAKQKAQQKQ- 235
Query: 107 EQALKESALLRMPV--SPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSK 164
+A K + V P KQKI T EKKS + D L +
Sbjct: 236 ARASKPTKPPSKKVIRKPVKKQKIVSTT--------TPSKEKKSKAQIKAEQDYYLALYR 287
Query: 165 VEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRF-KKLRVKMHFQLNQKGFVLGKINVD 223
E +R + P+ ++F +K V ++F +N++ + K++
Sbjct: 288 WE---------------LRRAIHQAVEYPAWARQFGQKGLVTVNFTVNRQAEIK-KLDAQ 331
Query: 224 VVGGTELVRRMLRENARKAVIKSQAFRLSPSTYKS--WR-NITLFFVPSK 270
G ++L L ++A + F L P + W +I+ F P+
Sbjct: 332 DQGASDL----LVNELKRATTEVVPFLLPPDALEGKQWDISISYRFDPNS 377
>gi|240136849|ref|YP_002961316.1| hypothetical protein MexAM1_META1p0071 [Methylobacterium extorquens
AM1]
gi|240006813|gb|ACS38039.1| hypothetical protein; putative exported protein; one putative TM
helix; putative F0F1-type ATP synthase subunit b COG
domain; putative Chromosome segregation ATPases COG
domain [Methylobacterium extorquens AM1]
Length = 530
Score = 37.0 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 15/83 (18%), Positives = 27/83 (32%), Gaps = 7/83 (8%)
Query: 170 RKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTE 229
+R P Q + +R+ W IP + L + LN + +
Sbjct: 433 SRRGPEQ----AMAHRLRQVWAIPEALRDDPSLWLTFAVTLNFDAEMTEAPKLLRSTSQR 488
Query: 230 LV---RRMLRENARKAVIKSQAF 249
+ E A +A+ +S F
Sbjct: 489 ATPEQLQAAVEAAHRAIRESAPF 511
>gi|119480437|ref|XP_001260247.1| retinoblastoma-binding protein [Neosartorya fischeri NRRL 181]
gi|119408401|gb|EAW18350.1| retinoblastoma-binding protein [Neosartorya fischeri NRRL 181]
Length = 632
Score = 37.0 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 30/141 (21%), Positives = 54/141 (38%), Gaps = 8/141 (5%)
Query: 32 PISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKT 91
P E + +DN+ +D SK K E+ + +Q+NL + + SD +T
Sbjct: 334 PGCATEGVLLDNLSVDDEAVSKIKAFEDEKADSRKDTQKNLT--VHDNSSNSKGSDSERT 391
Query: 92 HATENETKRSSSSKG---EQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKS 148
A E E S G K SA +P + ++ +S + K + A+ +
Sbjct: 392 VAGEKEPSSLPSVNGALDSATKKRSADENLPSTDHEGSNLSPSNKK---QKADPIAQAGT 448
Query: 149 IDTVVVRPDKKELLSKVEKSS 169
+ T + D +S +
Sbjct: 449 VSTNLQTQDSSNEVSSITHDQ 469
>gi|321249840|ref|XP_003191594.1| hypothetical protein CGB_A6360C [Cryptococcus gattii WM276]
gi|317458061|gb|ADV19807.1| Hypothetical protein CGB_A6360C [Cryptococcus gattii WM276]
Length = 569
Score = 37.0 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 25/167 (14%), Positives = 59/167 (35%), Gaps = 13/167 (7%)
Query: 63 QFKGSSQENLVRDFSVQ-ENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVS 121
Q + ++ + N + S + +T+ ++ G+Q ++ A + +
Sbjct: 385 QMTKTEEDGDAEQMEDKGANKPKLSKRGETNVVDSALPSRKRKHGDQTIETVANKQTKLD 444
Query: 122 PYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAI 181
P K+K ++ I ++D P + L + E +S + +
Sbjct: 445 PSKKRKKHESAPYAPSSVSIPTTITSTVDAPAADPKELHRLPQQENASNVNDY-RKEKSA 503
Query: 182 VRNRVIANWNIPSDFKRFKKLRVKMHFQLN-QKGFVLGKINVDVVGG 227
V + N K ++++ H + Q ++GK + GG
Sbjct: 504 VVGLIEVN-------KDGGEVKLSTHKRKKMQAKGLIGK---ESTGG 540
>gi|71660364|ref|XP_821899.1| mucin-associated surface protein (MASP) [Trypanosoma cruzi strain
CL Brener]
gi|70887289|gb|EAO00048.1| mucin-associated surface protein (MASP), putative [Trypanosoma
cruzi]
Length = 313
Score = 37.0 bits (84), Expect = 3.1, Method: Composition-based stats.
Identities = 20/119 (16%), Positives = 44/119 (36%), Gaps = 1/119 (0%)
Query: 47 EDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKG 106
+D ++ E + K ++E++V ++N T T E+ ++
Sbjct: 175 DDMPGPNSEETSESMKTTKDLAEEDIVTTADTKQNEASNGQTEATTKTPPESSDDDDNET 234
Query: 107 EQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKV 165
++ E P S + + + NK + + + I TV +PD + + V
Sbjct: 235 DKGTGEDTPNNAPESDVSETEENHDENKGNNSKETP-VQVAGIKTVTAKPDDSDSGTAV 292
>gi|256076350|ref|XP_002574476.1| endoplasmin [Schistosoma mansoni]
gi|238659681|emb|CAZ30709.1| endoplasmin, putative [Schistosoma mansoni]
Length = 1805
Score = 37.0 bits (84), Expect = 3.2, Method: Composition-based stats.
Identities = 23/113 (20%), Positives = 54/113 (47%), Gaps = 7/113 (6%)
Query: 46 NEDYHSSKYKKIEEPVVQFKGSSQENLVRDF-SVQENGDRFSDQTKTHATENETKRSSSS 104
N D+H+++++ E + K + +++ + S +N + + K N+ + +S
Sbjct: 1573 NPDHHNNQHQNANELKSKTKSVNSKSVQSNINSKNQNNIKHNSNNKQENGGNQNSKKTSK 1632
Query: 105 KG-----EQALKESALLRMPVSPYDKQKISKATNKEQDLQ-GISFAEKKSIDT 151
+G +LK+S ++P+ +Q K NK+Q+ + SF ++ D+
Sbjct: 1633 EGIKSTGSPSLKQSNQQQLPIKHVKEQNTVKLNNKQQNRKLAESFTPNENTDS 1685
>gi|327263901|ref|XP_003216755.1| PREDICTED: RNA-binding protein 10-like [Anolis carolinensis]
Length = 946
Score = 36.6 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 19/84 (22%), Positives = 39/84 (46%), Gaps = 3/84 (3%)
Query: 64 FKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMP--VS 121
++ + +RDF+ QE+ + + D ++ H+ E+ + SS S+ Q K + P +
Sbjct: 37 YRDMDYRSYLRDFNNQESNNDYDDSSEEHSVEDSYEASSGSE-TQRRKRDSPSEHPGFLG 95
Query: 122 PYDKQKISKATNKEQDLQGISFAE 145
D + T +E++ Q S
Sbjct: 96 DGDYRDQDYRTEQEEEEQKASSII 119
>gi|221058104|ref|XP_002261560.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
knowlesi strain H]
gi|194247565|emb|CAQ40965.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
knowlesi strain H]
Length = 812
Score = 36.6 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 14/85 (16%)
Query: 41 VDNIYNEDYHSSKYKKI----------EEPVVQFKGSSQENLVRDFSVQEN--GDRFSDQ 88
VD + ++ SSK K E V+Q K S++ N RD S +EN G +
Sbjct: 405 VDKCHVKNIKSSKVGKEGDAFDEKADQREEVIQAKSSAERN--RDASEEENSPGQNTEGE 462
Query: 89 TKTHATENETKRSSSSKGEQALKES 113
K + E T++ S KG +LK+S
Sbjct: 463 GKINVCEGGTEKRSDKKGSLSLKDS 487
>gi|195499745|ref|XP_002097077.1| GE26021 [Drosophila yakuba]
gi|194183178|gb|EDW96789.1| GE26021 [Drosophila yakuba]
Length = 2709
Score = 36.6 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 28/143 (19%), Positives = 62/143 (43%), Gaps = 7/143 (4%)
Query: 47 EDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETK---RSSS 103
+ +SK + EEP K ++QE D E+ ++ ++Q + + + R ++
Sbjct: 827 DSEKTSKLHQAEEPESNTKETNQETETSDSKETESAEKKAEQPRLKKLPSTAELEDRFNA 886
Query: 104 SKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDT---VVVRPDKKE 160
+ + ++++S+ + P D+ + SK+T + ++L KS D+ + + K
Sbjct: 887 LERKMSVQKSSPSKNKKEPPDEGE-SKSTKEPEELDEPGREIDKSSDSQTPIATKDPKDS 945
Query: 161 LLSKVEKSSRKRIPSQDAIAIVR 183
K E PS+ V+
Sbjct: 946 DQKKPETKETTTSPSKTQDQKVK 968
>gi|256076346|ref|XP_002574474.1| endoplasmin [Schistosoma mansoni]
gi|238659679|emb|CAZ30707.1| endoplasmin, putative [Schistosoma mansoni]
Length = 2172
Score = 36.6 bits (83), Expect = 3.6, Method: Composition-based stats.
Identities = 23/113 (20%), Positives = 54/113 (47%), Gaps = 7/113 (6%)
Query: 46 NEDYHSSKYKKIEEPVVQFKGSSQENLVRDF-SVQENGDRFSDQTKTHATENETKRSSSS 104
N D+H+++++ E + K + +++ + S +N + + K N+ + +S
Sbjct: 1573 NPDHHNNQHQNANELKSKTKSVNSKSVQSNINSKNQNNIKHNSNNKQENGGNQNSKKTSK 1632
Query: 105 KG-----EQALKESALLRMPVSPYDKQKISKATNKEQDLQ-GISFAEKKSIDT 151
+G +LK+S ++P+ +Q K NK+Q+ + SF ++ D+
Sbjct: 1633 EGIKSTGSPSLKQSNQQQLPIKHVKEQNTVKLNNKQQNRKLAESFTPNENTDS 1685
>gi|256076352|ref|XP_002574477.1| thrombospondin [Schistosoma mansoni]
gi|238659682|emb|CAZ30710.1| thrombospondin, putative [Schistosoma mansoni]
Length = 1020
Score = 36.6 bits (83), Expect = 4.0, Method: Composition-based stats.
Identities = 23/113 (20%), Positives = 54/113 (47%), Gaps = 7/113 (6%)
Query: 46 NEDYHSSKYKKIEEPVVQFKGSSQENLVRDF-SVQENGDRFSDQTKTHATENETKRSSSS 104
N D+H+++++ E + K + +++ + S +N + + K N+ + +S
Sbjct: 788 NPDHHNNQHQNANELKSKTKSVNSKSVQSNINSKNQNNIKHNSNNKQENGGNQNSKKTSK 847
Query: 105 KG-----EQALKESALLRMPVSPYDKQKISKATNKEQDLQ-GISFAEKKSIDT 151
+G +LK+S ++P+ +Q K NK+Q+ + SF ++ D+
Sbjct: 848 EGIKSTGSPSLKQSNQQQLPIKHVKEQNTVKLNNKQQNRKLAESFTPNENTDS 900
>gi|262283538|ref|ZP_06061304.1| conserved hypothetical protein [Streptococcus sp. 2_1_36FAA]
gi|262261029|gb|EEY79729.1| conserved hypothetical protein [Streptococcus sp. 2_1_36FAA]
Length = 235
Score = 36.6 bits (83), Expect = 4.2, Method: Composition-based stats.
Identities = 29/188 (15%), Positives = 75/188 (39%), Gaps = 5/188 (2%)
Query: 31 VPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTK 90
+ + E + D ++ +K ++ EPV + + VR Q + + +
Sbjct: 51 ITVDPVEPTTSDTATPKEAEETKPEQPMEPVTPVQPGQPTDPVRPLPDQPTQPKTPEPST 110
Query: 91 THATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSID 150
+ E ++SS + A + PV+P + S ++Q + + + +K +
Sbjct: 111 EPSRPKEVEQSSQTGQTPA---ATNPSAPVTPIVRSSASTEPAEDQPIIDVPASSEKPAE 167
Query: 151 TVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPS--DFKRFKKLRVKMHF 208
VV+ P + SK + + + S++ + + + + ++ S + + +H
Sbjct: 168 EVVITPKSQTQSSKTAEKTTELKESRETLDRLPDTGTDDSSLLSFLGAAALGLVGLVLHK 227
Query: 209 QLNQKGFV 216
+ N+ G +
Sbjct: 228 KQNKNGSI 235
>gi|118104615|ref|XP_424420.2| PREDICTED: similar to KIAA1281 protein [Gallus gallus]
Length = 1269
Score = 36.2 bits (82), Expect = 4.3, Method: Composition-based stats.
Identities = 19/96 (19%), Positives = 33/96 (34%), Gaps = 3/96 (3%)
Query: 59 EPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRM 118
+P +FK + Q ++ DQ K+ + + K S + KES+L +
Sbjct: 985 DPTTRFKQDPDTRTWHHYVYQ---PKYLDQQKSEELDRDKKLKEDSPRKTPNKESSLPNL 1041
Query: 119 PVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVV 154
PVS ++ K + K V
Sbjct: 1042 PVSLASIKEEPKEVKRSDSQSVDESKIKNDDRKTPV 1077
>gi|190345978|gb|EDK37960.2| hypothetical protein PGUG_02058 [Meyerozyma guilliermondii ATCC
6260]
Length = 471
Score = 36.2 bits (82), Expect = 4.4, Method: Composition-based stats.
Identities = 19/121 (15%), Positives = 37/121 (30%), Gaps = 12/121 (9%)
Query: 69 QENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKI 128
++ L F Q T + ++ LK + ++ V PYD ++
Sbjct: 351 EDTLHFHFERQPIPQNEYAHISTSINPDGKSTLFDNRFWIRLKIATKNKVSVEPYDPKRH 410
Query: 129 SKA-----------TNKEQDLQGISFAEKKSIDTVVVRPDKKELLS-KVEKSSRKRIPSQ 176
K +N + L+ + I V V K + VE + + +
Sbjct: 411 KKIIRQAFPELKKFSNLSKSLKSTPIVIAQDIMAVPVLDKVKANIPADVEVQLKANLFTN 470
Query: 177 D 177
Sbjct: 471 S 471
>gi|254787336|ref|YP_003074765.1| protein TolA [Teredinibacter turnerae T7901]
gi|237685700|gb|ACR12964.1| protein TolA [Teredinibacter turnerae T7901]
Length = 250
Score = 36.2 bits (82), Expect = 4.6, Method: Composition-based stats.
Identities = 43/270 (15%), Positives = 100/270 (37%), Gaps = 36/270 (13%)
Query: 7 LAISMILHVMFLLLLYFNFNV----QLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
+A+S+ILH + + +L+ NF + +V E V+ + + +S KK + +
Sbjct: 10 IAVSVILHGLVVAVLFVNFGSTPPPRKVVAPQYIEAKLVE-LEKKAKPASAPKKPKVVDL 68
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
+ +QE +Q+ Q K A + + + K ++ +E L
Sbjct: 69 TAQRKAQE-------IQKRAAEKQRQLKIQADKEAEAKRRAEKKQREKEEREKLAQQQRE 121
Query: 123 YDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIV 182
++QK +E+ Q + A K+ + + +Q ++
Sbjct: 122 MEQQK------RERMQQEFAEALKEEQGLLA--------------ADESATVAQSYADVI 161
Query: 183 RNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKA 242
+ R+ W+ P + +R ++ + G ++ +N+ G R +K
Sbjct: 162 QRRIEQQWSRPPSARN--GMRCELTIDMVPNGRII-DVNLKKSSGNSAFDRSAIAAVKKV 218
Query: 243 VIKSQAFRLSPSTYKS-WRNITLFFVPSKM 271
+ + + ++ +R +L F P +
Sbjct: 219 EVIPEVKDIPIDVFERHFRKFSLAFQPEDL 248
>gi|239622093|ref|ZP_04665124.1| adenine specific DNA methylase Mod [Bifidobacterium longum subsp.
infantis CCUG 52486]
gi|239515284|gb|EEQ55151.1| adenine specific DNA methylase Mod [Bifidobacterium longum subsp.
infantis CCUG 52486]
Length = 622
Score = 36.2 bits (82), Expect = 4.9, Method: Composition-based stats.
Identities = 27/127 (21%), Positives = 48/127 (37%), Gaps = 4/127 (3%)
Query: 10 SMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQ 69
SMI + L F + + + I E ++ NI +E + +S + ++ K S
Sbjct: 164 SMIYPRLLLARDLFTQDGAIFISIDDNEDKNLKNICDEIFGAS---NFVDTIIWQKRYSP 220
Query: 70 ENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKIS 129
+N V+ FS + + K+ N KRS +++ R P P +
Sbjct: 221 QNAVQWFSESHDYILVYAKNKSQWFPNLLKRSDEMNARYTNRDND-PRGPWKPENSTAQG 279
Query: 130 KATNKEQ 136
K Q
Sbjct: 280 GHGTKSQ 286
>gi|95930363|ref|ZP_01313100.1| TonB-like [Desulfuromonas acetoxidans DSM 684]
gi|95133615|gb|EAT15277.1| TonB-like [Desulfuromonas acetoxidans DSM 684]
Length = 287
Score = 36.2 bits (82), Expect = 4.9, Method: Composition-based stats.
Identities = 15/75 (20%), Positives = 28/75 (37%), Gaps = 6/75 (8%)
Query: 183 RNRVIANWNIPS-DFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARK 241
+ ++ WN P K+ ++ + +N+ G V V G L R +
Sbjct: 192 KKQIYGVWNYPEEAMKKRQQGVALLKVVINRDGSVEDVDLVSASGFERLDREAIA----- 246
Query: 242 AVIKSQAFRLSPSTY 256
A+ K + P +Y
Sbjct: 247 AIFKGGPYGALPDSY 261
>gi|256076348|ref|XP_002574475.1| thrombospondin [Schistosoma mansoni]
gi|238659680|emb|CAZ30708.1| thrombospondin, putative [Schistosoma mansoni]
Length = 1344
Score = 36.2 bits (82), Expect = 5.1, Method: Composition-based stats.
Identities = 23/113 (20%), Positives = 54/113 (47%), Gaps = 7/113 (6%)
Query: 46 NEDYHSSKYKKIEEPVVQFKGSSQENLVRDF-SVQENGDRFSDQTKTHATENETKRSSSS 104
N D+H+++++ E + K + +++ + S +N + + K N+ + +S
Sbjct: 745 NPDHHNNQHQNANELKSKTKSVNSKSVQSNINSKNQNNIKHNSNNKQENGGNQNSKKTSK 804
Query: 105 KG-----EQALKESALLRMPVSPYDKQKISKATNKEQDLQ-GISFAEKKSIDT 151
+G +LK+S ++P+ +Q K NK+Q+ + SF ++ D+
Sbjct: 805 EGIKSTGSPSLKQSNQQQLPIKHVKEQNTVKLNNKQQNRKLAESFTPNENTDS 857
>gi|223043359|ref|ZP_03613405.1| lipase 2 (Glycerol ester hydrolase 2) [Staphylococcus capitis SK14]
gi|222443148|gb|EEE49247.1| lipase 2 (Glycerol ester hydrolase 2) [Staphylococcus capitis SK14]
Length = 772
Score = 36.2 bits (82), Expect = 5.1, Method: Composition-based stats.
Identities = 30/156 (19%), Positives = 60/156 (38%), Gaps = 10/156 (6%)
Query: 32 PISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKT 91
P S+ S DN+ D K K Q + ++QE+ R+ + + D +
Sbjct: 234 PDSQHSQKSEDNLSTRDTTYPKESKQNSSSSQTQETTQES--RNNKDETDNDNPQSKGAH 291
Query: 92 HATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFA--EKKSI 149
+++N RS+ + + K+S L+ D ++ + +Q ++ E K+
Sbjct: 292 QSSQNTQLRSTENNDDP--KDSTQLKSSNKEQDTREQNNEKEVDQPIKKTPSMKQENKNT 349
Query: 150 DTVVVRPDKKE----LLSKVEKSSRKRIPSQDAIAI 181
V+ DK E K +S + S+ +
Sbjct: 350 TKQSVKTDKTEKPTSTAPKTLQSHQPNKLSKQTLQA 385
>gi|292490340|ref|YP_003525779.1| protein TolA [Nitrosococcus halophilus Nc4]
gi|291578935|gb|ADE13392.1| protein TolA [Nitrosococcus halophilus Nc4]
Length = 296
Score = 36.2 bits (82), Expect = 5.2, Method: Composition-based stats.
Identities = 14/74 (18%), Positives = 25/74 (33%), Gaps = 7/74 (9%)
Query: 182 VRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARK 241
++ RV W P + ++ +++ G V V G R +A
Sbjct: 212 IQQRVGRYWTRPPSARDNLEVVLQVEML--PDGEVRNVKVVKTSGD-----RAFDRSAEA 264
Query: 242 AVIKSQAFRLSPST 255
AV K+ + P
Sbjct: 265 AVYKAAPLPVPPDR 278
>gi|327285334|ref|XP_003227389.1| PREDICTED: hypothetical protein LOC100563688 [Anolis carolinensis]
Length = 1412
Score = 36.2 bits (82), Expect = 5.5, Method: Composition-based stats.
Identities = 30/139 (21%), Positives = 62/139 (44%), Gaps = 12/139 (8%)
Query: 33 ISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDF-----SVQENGDRFSD 87
+S REM ++ + +N+ H K++ E V + QE L F + GD+ +D
Sbjct: 859 LSEREMANLKSAFNKKIHGYVSKRLSEIEVITEKELQEILKHFFPIVAKEISLRGDKETD 918
Query: 88 QTKT-HATENETKRSSSSKGEQALKE-SALLRMPVSPYDKQKISKATNKEQDLQGISFAE 145
+K T+ E+ L+ +LL + K+++S E +++G++
Sbjct: 919 VSKKGPTVPPLTQNLHDRFSEEELQNLKSLLGRLLQEDHKEELS-----ESEVKGLTSVL 973
Query: 146 KKSIDTVVVRPDKKELLSK 164
+K+I+ V + ++K
Sbjct: 974 QKNIEDVPIHSGSGTEMNK 992
>gi|88810553|ref|ZP_01125810.1| TolA protein, putative [Nitrococcus mobilis Nb-231]
gi|88792183|gb|EAR23293.1| TolA protein, putative [Nitrococcus mobilis Nb-231]
Length = 308
Score = 35.9 bits (81), Expect = 5.6, Method: Composition-based stats.
Identities = 17/92 (18%), Positives = 29/92 (31%), Gaps = 5/92 (5%)
Query: 179 IAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLREN 238
I ++ V NW P R + + G ++ V G
Sbjct: 222 IPAIQRNVTQNWLRPVGIPRGLSCVIHVRMG---AGGIVLDARVVQSSGNTAFDHSAETA 278
Query: 239 ARKAVIKSQAFRLSPSTYKSWRNITLFFVPSK 270
RKA P+ ++R+++ F PS
Sbjct: 279 VRKA--SPLPVPNDPAIAAAFRDLSFEFQPSS 308
>gi|291231515|ref|XP_002735713.1| PREDICTED: hypothetical protein [Saccoglossus kowalevskii]
Length = 1158
Score = 35.9 bits (81), Expect = 5.8, Method: Composition-based stats.
Identities = 20/113 (17%), Positives = 52/113 (46%), Gaps = 1/113 (0%)
Query: 77 SVQENGDRFSDQTKTHATENETKRSSSS-KGEQALKESALLRMPVSPYDKQKISKATNKE 135
S+++ G R +D++ ++ E K + ++ LK+ + + + P D ++ ++ + E
Sbjct: 203 SMRQVGSRAADESVSNRVERRLKEIEDEIRLQRTLKQPPMDSIGMVPADLRQAMRSQSIE 262
Query: 136 QDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIA 188
+D Q K I+ + D + K+++S R + I + +++
Sbjct: 263 EDRQLRERMIKSEIEKQHLLSDYETTKRKLDQSEGSRNALKQKIEELEDQLSR 315
>gi|71660376|ref|XP_821905.1| mucin-associated surface protein (MASP) [Trypanosoma cruzi strain
CL Brener]
gi|70887295|gb|EAO00054.1| mucin-associated surface protein (MASP), putative [Trypanosoma
cruzi]
Length = 314
Score = 35.9 bits (81), Expect = 5.8, Method: Composition-based stats.
Identities = 18/124 (14%), Positives = 44/124 (35%), Gaps = 1/124 (0%)
Query: 47 EDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKG 106
+D ++ E + K ++E++V ++N T T + ++
Sbjct: 175 DDMPGPNSEETSESMKTTKDLAEEDIVTTADTKQNEASNGQTEATTKTPPQASDDDDNET 234
Query: 107 EQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVE 166
++ E P S + + + NK + + + I TV +P + + V
Sbjct: 235 DKGTGEDTPNNAPESDVSETEENHDENKGNNSKETP-VQVAGIKTVTAKPGDTDGSTAVS 293
Query: 167 KSSR 170
++
Sbjct: 294 HTTS 297
>gi|168213718|ref|ZP_02639343.1| hypothetical protein AC5_2533 [Clostridium perfringens CPE str.
F4969]
gi|170714794|gb|EDT26976.1| hypothetical protein AC5_2533 [Clostridium perfringens CPE str.
F4969]
Length = 220
Score = 35.9 bits (81), Expect = 6.0, Method: Composition-based stats.
Identities = 32/159 (20%), Positives = 68/159 (42%), Gaps = 12/159 (7%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
+ GL ++L L++ + V L ++ + SV N NE + ++ + ++ +
Sbjct: 7 MNKGLLSFLVLFFTTLIMGAMTYFVNLNYEEAKLKAESVKNQKNEILNINEEENGQKAIE 66
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENE------------TKRSSSSKGEQAL 110
K +E+ ++ + N ++ +D K+ E + K++ SK + A
Sbjct: 67 NNKEELKEDREKENISENNNNQSNDLDKSQLKEEKEIEGKSKENATNIKKNEKSKEKVAE 126
Query: 111 KESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSI 149
++S+ V DK I K NK + +S A+ S+
Sbjct: 127 EKSSKESKEVFKVDKYSIPKKINKADKFKLMSIAKNLSL 165
>gi|8163678|gb|AAF73797.1|AF154028_1 surface protein PspC [Streptococcus pneumoniae]
Length = 730
Score = 35.9 bits (81), Expect = 6.1, Method: Composition-based stats.
Identities = 28/159 (17%), Positives = 63/159 (39%), Gaps = 12/159 (7%)
Query: 31 VPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTK 90
V + E ++NI + + + K + K S ++N+ + G R
Sbjct: 212 VESKKAEATRLENIKTDREKAEEEAKRRAEA-KLKESVEKNVATSEQDKPKGRRKRGVPG 270
Query: 91 THATENETKRSSSSKGEQALKESALLRMPVSPYDK-----QKISKA-----TNKEQDLQG 140
AT ++ K + + + ++ E AL + P K +K+++A KE+D +
Sbjct: 271 EQATPDK-KENDAKSSDSSVGEEALPSPSLKPEKKVAEAEKKVAEAEKKAKAQKEEDRRN 329
Query: 141 ISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAI 179
K+++ + D K +++E + S++
Sbjct: 330 YPTNTYKTLELEIAESDVKVKEAELELVKEEAKESRNEE 368
>gi|118398665|ref|XP_001031660.1| cyclic nucleotide-binding domain containing protein [Tetrahymena
thermophila]
gi|89285992|gb|EAR83997.1| cyclic nucleotide-binding domain containing protein [Tetrahymena
thermophila SB210]
Length = 705
Score = 35.9 bits (81), Expect = 6.1, Method: Composition-based stats.
Identities = 31/154 (20%), Positives = 62/154 (40%), Gaps = 21/154 (13%)
Query: 43 NIYNEDYHSSKYKKIE--------EPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHAT 94
N+ S Y+ IE EP +Q + Q++ + FSD+ K ++
Sbjct: 471 NLNKARLSSKTYQSIEQLNFLQKNEPSLQLEEIQNSQNTH---KQKSSNNFSDENKNISS 527
Query: 95 ---ENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDT 151
ENE + S+S K ++ + + M K KI ++N ++ + ++
Sbjct: 528 LFQENEKQISNSIKKQKTVSYNNTQEMS-----KNKIPHSSNNANTYNSLNQIYQNNVSN 582
Query: 152 VVVRPDKKELLSKVEKSSRKRIPSQDAI--AIVR 183
+ P+ K+ L+ + +RK S I ++
Sbjct: 583 LFQNPNLKQFLNNYAQYNRKNNFSHKTIKFDALK 616
>gi|119655545|gb|ABL86143.1| BRCA1 [Strongylocentrotus purpuratus]
Length = 2641
Score = 35.9 bits (81), Expect = 6.8, Method: Composition-based stats.
Identities = 36/164 (21%), Positives = 61/164 (37%), Gaps = 14/164 (8%)
Query: 26 NVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQ------ 79
N+Q+ VP S + + N N +++Y+K E K + + + DF
Sbjct: 1307 NIQI-VPDSLEQPTASSNKSNLTKEANQYQKDPEAPSH-KETCEADEDIDFVENMKSPSC 1364
Query: 80 ----ENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKE 135
G + +KT +ET S + K+S +P+S + S N E
Sbjct: 1365 QRSVRKGSKSPQDSKTLEVADETLTSQQTASPMTRKKSK--SLPLSDSQSNRKSAVKNIE 1422
Query: 136 QDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAI 179
+ S +T+V K L K + S R+ +Q I
Sbjct: 1423 DSEKESPSCAYTSQETLVSVASKSSLTLKRKSRSGGRLTTQSPI 1466
>gi|90022175|ref|YP_528002.1| LytB protein [Saccharophagus degradans 2-40]
gi|89951775|gb|ABD81790.1| TonB-like protein [Saccharophagus degradans 2-40]
Length = 253
Score = 35.9 bits (81), Expect = 7.0, Method: Composition-based stats.
Identities = 15/69 (21%), Positives = 29/69 (42%), Gaps = 3/69 (4%)
Query: 173 IPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVR 232
+Q A++R RV +W+ P + +R ++ QL G V+ + + G
Sbjct: 155 TQAQSYAALIRQRVERSWSRPPSARN--GMRCELSIQLVPSGRVI-DVQISRSSGDAAFD 211
Query: 233 RMLRENARK 241
R + +K
Sbjct: 212 RAALKAVKK 220
>gi|168205585|ref|ZP_02631590.1| hypothetical protein AC3_2774 [Clostridium perfringens E str.
JGS1987]
gi|169344223|ref|ZP_02865205.1| hypothetical protein CPC_2489 [Clostridium perfringens C str.
JGS1495]
gi|169297682|gb|EDS79782.1| hypothetical protein CPC_2489 [Clostridium perfringens C str.
JGS1495]
gi|170662919|gb|EDT15602.1| hypothetical protein AC3_2774 [Clostridium perfringens E str.
JGS1987]
Length = 220
Score = 35.9 bits (81), Expect = 7.1, Method: Composition-based stats.
Identities = 31/159 (19%), Positives = 67/159 (42%), Gaps = 12/159 (7%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
+ GL ++L L++ + V L ++ + S+ N NE + ++ + ++ +
Sbjct: 7 MNKGLLSFLVLFFTTLIMGAMTYFVNLNYEEAKLKAESIKNQRNEILNINEEENGQKAIE 66
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENE------------TKRSSSSKGEQAL 110
K +E+ ++ + N + +D K+ E + K++ SK + A
Sbjct: 67 NNKEELKEDREKENISENNNKQSNDLDKSQLKEEKEIEGKSKENATNIKKNEKSKEKVAE 126
Query: 111 KESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSI 149
++S+ V DK I K NK + +S A+ S+
Sbjct: 127 EKSSKESKEVFKVDKYSIPKKINKADKFKLMSIAKNLSL 165
>gi|163937950|ref|YP_001642835.1| putative cell surface protein [Bacillus weihenstephanensis KBAB4]
gi|163865805|gb|ABY46860.1| putative cell surface protein [Bacillus weihenstephanensis KBAB4]
Length = 172
Score = 35.5 bits (80), Expect = 7.4, Method: Composition-based stats.
Identities = 26/118 (22%), Positives = 42/118 (35%), Gaps = 17/118 (14%)
Query: 47 EDYHSSKYKKIEE--PVVQFKGSSQENLVRDF---------SVQENGDRFSDQTKTHATE 95
D + +K +E G S N D V++ +K +
Sbjct: 29 NDKNCGHFKNKQEVMEFWHSNGYSATNDPHDLDRDNDGLPCEVKKGDYDQFIASKQTTKK 88
Query: 96 NETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVV 153
+ETK K E KE PV + Q+ +KATN +Q+ + KK + +
Sbjct: 89 DETKPQEQVKQEDTKKE------PVKQENTQQNNKATNNKQEQTAVKAETKKQGEKLP 140
>gi|196007210|ref|XP_002113471.1| hypothetical protein TRIADDRAFT_57690 [Trichoplax adhaerens]
gi|190583875|gb|EDV23945.1| hypothetical protein TRIADDRAFT_57690 [Trichoplax adhaerens]
Length = 918
Score = 35.5 bits (80), Expect = 8.2, Method: Composition-based stats.
Identities = 39/172 (22%), Positives = 71/172 (41%), Gaps = 12/172 (6%)
Query: 33 ISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQEN--GDRFS-DQT 89
+ R EM I EDY S+K KKI + + + NL +Q N DR D
Sbjct: 248 LGRYEMEKRRAIEIEDYDSAKAKKITMDEYRLQVYRELNLRELLELQPNRTTDRSMLDNV 307
Query: 90 KTHATENETKRSSSSKGEQALK-ESALLR-MPVSPYDKQKISKATN--KEQDLQGISFAE 145
++E +T+ ++K E R + ++P Q ++A++ + D + + +
Sbjct: 308 MKESSEAKTQNQDDQDSVSSVKPEERPPRPVVLTPIAGQTNTQASDTYESYDSKPLPAVQ 367
Query: 146 KKSI-----DTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNI 192
KKS D + ++ E L+ + + + IV+ NW+I
Sbjct: 368 KKSPEKFENDKPLHTEEEPEPLTDKQLREASDVLDVLGLDIVKGIYSRNWSI 419
>gi|332071271|gb|EGI81766.1| choline binding protein A [Streptococcus pneumoniae GA17545]
Length = 529
Score = 35.5 bits (80), Expect = 9.0, Method: Composition-based stats.
Identities = 27/159 (16%), Positives = 63/159 (39%), Gaps = 12/159 (7%)
Query: 31 VPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTK 90
V + E ++NI + + + K + K + ++N+ + G R
Sbjct: 31 VESKKAEATRLENIKTDREKAEEEAKRRAEA-KLKEAVEKNVATSEQDKPKGRRKRGVPG 89
Query: 91 THATENETKRSSSSKGEQALKESALLRMPVSPYDK-----QKISKA-----TNKEQDLQG 140
AT ++ K + + + ++ E AL + P K +K+++A KE+D +
Sbjct: 90 EQATPDK-KENDAKSSDSSVGEEALPSPSLKPEKKVAEAEKKVAEAEKKAKAQKEEDRRN 148
Query: 141 ISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAI 179
K+++ + D K +++E + S++
Sbjct: 149 YPTNTYKTLELEIAESDVKVKEAELELVKEEAKESRNEE 187
>gi|229155303|ref|ZP_04283414.1| hypothetical protein bcere0010_14960 [Bacillus cereus ATCC 4342]
gi|228628228|gb|EEK84944.1| hypothetical protein bcere0010_14960 [Bacillus cereus ATCC 4342]
Length = 433
Score = 35.5 bits (80), Expect = 9.1, Method: Composition-based stats.
Identities = 37/151 (24%), Positives = 57/151 (37%), Gaps = 17/151 (11%)
Query: 25 FNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDR 84
F + +PI E+L I D +K + E +V E+ + +EN D+
Sbjct: 247 FEITDALPIGSYELL----IEIVDAAGNKLVEESEYIVSVLEQKTEDDKK-IEERENEDK 301
Query: 85 FSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFA 144
D K E ET++ SK E L+E + +I K K DL
Sbjct: 302 LED--KKETDEKETEKQEDSKVEIPLQEEKPPVV--------QIPKKEEKVNDLIKEPLK 351
Query: 145 EKKSIDTVVVRP--DKKELLSKVEKSSRKRI 173
EK+ I V+ P D KE+ + +
Sbjct: 352 EKEKITYVIKEPLTDNKEVNKAKAQKDKDNN 382
>gi|126331253|ref|XP_001365482.1| PREDICTED: similar to KIAA0626 protein [Monodelphis domestica]
Length = 417
Score = 35.5 bits (80), Expect = 9.2, Method: Composition-based stats.
Identities = 23/127 (18%), Positives = 48/127 (37%), Gaps = 16/127 (12%)
Query: 55 KKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGE------Q 108
+ I E +++ G +E G +D + + N KRS S G+
Sbjct: 252 RTIMEEIMEVVGL-EEQGQNFVRHTPEGQEATDGDEVYTIPNALKRSDSPTGDSDASSLH 310
Query: 109 ALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEK-KSIDTVVVRPDKKELLSK--V 165
+ +++ V P K+ ++ +D +G+ K + + V P+ E S+ V
Sbjct: 311 EQPQQIAIKVSVHPLSKK------DRLEDQEGVQVEIKDEEVPEEAVAPEGPEPPSELPV 364
Query: 166 EKSSRKR 172
+ +
Sbjct: 365 DAETSGD 371
>gi|258591275|emb|CBE67572.1| protein of unknown function [NC10 bacterium 'Dutch sediment']
Length = 278
Score = 35.1 bits (79), Expect = 9.5, Method: Composition-based stats.
Identities = 30/166 (18%), Positives = 55/166 (33%), Gaps = 36/166 (21%)
Query: 111 KESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVE--KS 168
K A R+PV+P G + +V V + V+ K+
Sbjct: 115 KRRAPTRLPVAP------------PLTTPGPPKIVAPLVASVPVGAQPGIMSPVVDPAKA 162
Query: 169 SRKRIPSQDAIAIV----------------RNRVIANWNIPSDFKRFKKLRVKMHFQLNQ 212
R P A V ++++ +NW +P V + ++ +
Sbjct: 163 GAGRDPGTVAETGVTVGNTDPALAYYFVLIQDKITSNW-MPPKMSPGAMAGVSVSLRILR 221
Query: 213 KGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPSTYKS 258
G + VG + R +L ++A +A+ S P YK+
Sbjct: 222 SGQI----RNLAVGSSSGDR-LLDDSAVRAISLSSPLPPLPPLYKA 262
>gi|67477871|ref|XP_654370.1| villidin [Entamoeba histolytica HM-1:IMSS]
gi|56471436|gb|EAL49006.1| villidin, putative [Entamoeba histolytica HM-1:IMSS]
Length = 812
Score = 35.1 bits (79), Expect = 9.5, Method: Composition-based stats.
Identities = 21/102 (20%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 82 GDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGI 141
++ + KT + + SS+ Q +K++ + V+ KQ ++K +K +Q
Sbjct: 71 NSQYLFKKKTERITSRISQDLSSQHNQEVKKNPEVVRKVTEKLKQSVTKENDKNITIQRT 130
Query: 142 SFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVR 183
+ SI + R D++E + ++ +PS+++ +VR
Sbjct: 131 PSILRSSIRKSITRKDEEE---NTKPTTDISLPSKESQQLVR 169
>gi|325911068|gb|ADZ45262.1| pneumococcal surface protein C [Streptococcus pneumoniae]
Length = 729
Score = 35.1 bits (79), Expect = 9.6, Method: Composition-based stats.
Identities = 27/159 (16%), Positives = 63/159 (39%), Gaps = 12/159 (7%)
Query: 31 VPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTK 90
V + E ++NI + + + K + K + ++N+ + G R
Sbjct: 212 VESKKAEATRLENIKTDREKAEEEAKRRAEA-KLKEAVEKNVATSEQDKPKGRRKRGVPG 270
Query: 91 THATENETKRSSSSKGEQALKESALLRMPVSPYDK-----QKISKA-----TNKEQDLQG 140
AT ++ K + + + ++ E AL + P K +K+++A KE+D +
Sbjct: 271 EQATPDK-KENDAKSSDSSVGEEALPSPSLKPEKKVAEAEKKVAEAEKKAKAQKEEDRRN 329
Query: 141 ISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAI 179
K+++ + D K +++E + S++
Sbjct: 330 YPTNTYKTLELEIAESDVKVKEAELELVKEEAKESRNEE 368
>gi|110833618|ref|YP_692477.1| hypothetical protein ABO_0757 [Alcanivorax borkumensis SK2]
gi|110646729|emb|CAL16205.1| conserved hypothetical protein [Alcanivorax borkumensis SK2]
Length = 258
Score = 35.1 bits (79), Expect = 9.6, Method: Composition-based stats.
Identities = 13/91 (14%), Positives = 35/91 (38%), Gaps = 7/91 (7%)
Query: 180 AIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENA 239
+ + V W IP +++ +R ++ ++ G V+ G + ++
Sbjct: 169 DAIASHVGQQWRIPGNYRNRDDIRTRVRIKMIPGGEVVNVSVAQSSGYPD-----FDDSV 223
Query: 240 RKAVIKSQAFRLSPSTY--KSWRNITLFFVP 268
AV + + + + +R++ + F P
Sbjct: 224 LNAVKLASPLPVPDGSLFNEQFRSLVIEFDP 254
>gi|149377077|ref|ZP_01894827.1| hypothetical protein MDG893_11869 [Marinobacter algicola DG893]
gi|149358613|gb|EDM47085.1| hypothetical protein MDG893_11869 [Marinobacter algicola DG893]
Length = 248
Score = 35.1 bits (79), Expect = 9.7, Method: Composition-based stats.
Identities = 13/82 (15%), Positives = 31/82 (37%), Gaps = 7/82 (8%)
Query: 192 IPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRL 251
+PS ++ ++ +L Q G + G G ++ R + +A + + +
Sbjct: 172 VPSSHSVTTQVTSQVELRLLQSGALTGAKVTKSTGFNDIDRAI-----YQAALLASPYPE 226
Query: 252 SPSTYKSWRNITLF--FVPSKM 271
P Y + + F P ++
Sbjct: 227 PPEEYSGRKRFRVELIFSPERL 248
>gi|224476831|ref|YP_002634437.1| FtsK/SpoIIIE family protein [Staphylococcus carnosus subsp.
carnosus TM300]
gi|222421438|emb|CAL28252.1| FtsK/SpoIIIE family protein [Staphylococcus carnosus subsp.
carnosus TM300]
Length = 1222
Score = 35.1 bits (79), Expect = 9.8, Method: Composition-based stats.
Identities = 25/131 (19%), Positives = 63/131 (48%), Gaps = 15/131 (11%)
Query: 52 SKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALK 111
S + +EE + + + + E D QEN + + E+++K+S+ S+ ++ L+
Sbjct: 581 SDTETLEESISEDEETQNEIDTHD--KQENNE--------NEVEDKSKQSADSEIKRPLR 630
Query: 112 ESA-LLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKEL----LSKVE 166
+ A + ++P DK+++ +A +K+S T +P+++++ + K++
Sbjct: 631 KGAKPFNVMMTPSDKRRMQRANKNNNASTLRPDIKKESESTRENKPEQEQVQDADVEKLQ 690
Query: 167 KSSRKRIPSQD 177
R +P +
Sbjct: 691 GEQRNNVPENN 701
Database: nr
Posted date: May 22, 2011 12:22 AM
Number of letters in database: 999,999,966
Number of sequences in database: 2,987,313
Database: /data/usr2/db/fasta/nr.01
Posted date: May 22, 2011 12:30 AM
Number of letters in database: 999,999,796
Number of sequences in database: 2,903,041
Database: /data/usr2/db/fasta/nr.02
Posted date: May 22, 2011 12:36 AM
Number of letters in database: 999,999,281
Number of sequences in database: 2,904,016
Database: /data/usr2/db/fasta/nr.03
Posted date: May 22, 2011 12:41 AM
Number of letters in database: 999,999,960
Number of sequences in database: 2,935,328
Database: /data/usr2/db/fasta/nr.04
Posted date: May 22, 2011 12:46 AM
Number of letters in database: 842,794,627
Number of sequences in database: 2,394,679
Lambda K H
0.306 0.129 0.341
Lambda K H
0.267 0.0388 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,104,345,014
Number of Sequences: 14124377
Number of extensions: 139530522
Number of successful extensions: 532222
Number of sequences better than 10.0: 754
Number of HSP's better than 10.0 without gapping: 204
Number of HSP's successfully gapped in prelim test: 863
Number of HSP's that attempted gapping in prelim test: 530998
Number of HSP's gapped (non-prelim): 1744
length of query: 271
length of database: 4,842,793,630
effective HSP length: 137
effective length of query: 134
effective length of database: 2,907,753,981
effective search space: 389639033454
effective search space used: 389639033454
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.0 bits)
S2: 80 (35.5 bits)