BLASTP 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= gi|254780549|ref|YP_003064962.1| signal peptide protein
[Candidatus Liberibacter asiaticus str. psy62]
(271 letters)
Database: nr
14,124,377 sequences; 4,842,793,630 total letters
Searching..................................................done
>gi|71083301|ref|YP_266020.1| TolA protein [Candidatus Pelagibacter ubique HTCC1062]
gi|91762269|ref|ZP_01264234.1| TolA protein [Candidatus Pelagibacter ubique HTCC1002]
gi|71062414|gb|AAZ21417.1| TolA protein [Candidatus Pelagibacter ubique HTCC1062]
gi|91718071|gb|EAS84721.1| TolA protein [Candidatus Pelagibacter ubique HTCC1002]
Length = 269
Score = 193 bits (489), Expect = 3e-47, Method: Composition-based stats.
Identities = 39/272 (14%), Positives = 103/272 (37%), Gaps = 9/272 (3%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
+ + IS LH+ +++ + PI ++SV+ I D + + + ++
Sbjct: 1 MNRNIVISFGLHIFLVVITAMSLPFLAKKPIDLPPIISVELIQITDKTNIPFAPKAKKII 60
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
+ ++ LV + + + + E K +Q ++ +S
Sbjct: 61 EKVKEKEKKLVSEQAPPKKIKKQKPDAVPLPDEKIEKIKKIKDEKQNPEKEETEIKQISE 120
Query: 123 YDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIV 182
++K+++ + +K ++ ++ +K + +
Sbjct: 121 FEKKELF------DTNSIAALIDKSKTESAETNKKSNKVTQDQDKDMDFSGLTLSEEDAL 174
Query: 183 RNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVD---VVGGTELVRRMLRENA 239
+ ++ W+IP + L V++ QL G ++ +D + + ++L E+A
Sbjct: 175 KAQIFGCWSIPLGLPFNEDLLVRIKLQLKPDGSIIKTEILDHARMNRPGQGFYKVLAESA 234
Query: 240 RKAVIKSQAFRLSPSTYKSWRNITLFFVPSKM 271
+A+ Q R+ + Y+ W+++ L F +M
Sbjct: 235 LRAIKLCQPLRVPSTGYERWKDMQLNFDAREM 266
>gi|262277491|ref|ZP_06055284.1| TolA protein [alpha proteobacterium HIMB114]
gi|262224594|gb|EEY75053.1| TolA protein [alpha proteobacterium HIMB114]
Length = 270
Score = 189 bits (479), Expect = 3e-46, Method: Composition-based stats.
Identities = 36/272 (13%), Positives = 104/272 (38%), Gaps = 8/272 (2%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
+ L++S++ H + +F + PI ++S+D I D + + ++
Sbjct: 1 MYRSLSLSILFHAGIFAVTFFTLPFIVKKPIDVPPIISIDLIQISDKTALPFAPKAREII 60
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
+ +E +V + + + + + K+ + + + + S
Sbjct: 61 EKIKEEKERVVTKQAPPKIVKKEKQDAVPMPDQIKKKKPKETDKQNPEEVKDEI-RQSSE 119
Query: 123 YDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIV 182
++K+++ + + K+ + + + + S + + +
Sbjct: 120 FEKKELFDPNK----IAALIDKSKEETADIQQKQSLEITQDQDSTVSLDKGLTITQEDAI 175
Query: 183 RNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVD---VVGGTELVRRMLRENA 239
+ ++ WNIP + L V++ +LN+ G ++ +D + + ++L E+A
Sbjct: 176 KAQIFKCWNIPLGLPYDEDLTVRVRLKLNKDGSIMSSEILDHVRMNRPGQGFYKVLAESA 235
Query: 240 RKAVIKSQAFRLSPSTYKSWRNITLFFVPSKM 271
+AV ++ + + W+++ L F +M
Sbjct: 236 LRAVRLCNPLKMPATGHDKWKDLQLNFDAKEM 267
>gi|254780549|ref|YP_003064962.1| signal peptide protein [Candidatus Liberibacter asiaticus str.
psy62]
gi|254040226|gb|ACT57022.1| signal peptide protein [Candidatus Liberibacter asiaticus str.
psy62]
Length = 271
Score = 183 bits (465), Expect = 2e-44, Method: Composition-based stats.
Identities = 271/271 (100%), Positives = 271/271 (100%)
Query: 1 MRLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP 60
MRLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP
Sbjct: 1 MRLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP 60
Query: 61 VVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPV 120
VVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPV
Sbjct: 61 VVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPV 120
Query: 121 SPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIA 180
SPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIA
Sbjct: 121 SPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIA 180
Query: 181 IVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENAR 240
IVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENAR
Sbjct: 181 IVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENAR 240
Query: 241 KAVIKSQAFRLSPSTYKSWRNITLFFVPSKM 271
KAVIKSQAFRLSPSTYKSWRNITLFFVPSKM
Sbjct: 241 KAVIKSQAFRLSPSTYKSWRNITLFFVPSKM 271
>gi|254456093|ref|ZP_05069522.1| TolA protein [Candidatus Pelagibacter sp. HTCC7211]
gi|207083095|gb|EDZ60521.1| TolA protein [Candidatus Pelagibacter sp. HTCC7211]
Length = 292
Score = 170 bits (431), Expect = 1e-40, Method: Composition-based stats.
Identities = 41/295 (13%), Positives = 99/295 (33%), Gaps = 32/295 (10%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIE---- 58
+ L IS +LH + + + PI ++SV+ I + + +
Sbjct: 1 MNRSLIISSVLHGALIFITAMSLPFLAKKPIDIPPVVSVELIQIAEKTNIPFAPKAKKII 60
Query: 59 -EPVVQFKGSSQENLVRDFSVQ------------------ENGDRFSDQTKTHATENETK 99
+ + ++ LV + + E D + + K
Sbjct: 61 EKKKKKKLKEKEKKLVSEQAPPKKVKKSKTKTVVSLDNQKEKIDNQKPEAIPLPDKTVKK 120
Query: 100 RSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKK 159
+ Q ++ VS ++K+ + + +K I+
Sbjct: 121 IEKKKETRQNPEKVDNEVKQVSEFEKKDLF------DPSNIAALIDKSKIEETDNIKKNN 174
Query: 160 ELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGK 219
++ +++ + ++ ++ W++P + L V++ +L G V
Sbjct: 175 DITQDQDRNIESNKLTLSEEDALKAQIFGCWSVPLGLPYNEDLLVRIKLKLEPDGSVAKT 234
Query: 220 INVD---VVGGTELVRRMLRENARKAVIKSQAFRLSPSTYKSWRNITLFFVPSKM 271
+D + + ++L E+A +AV Q R+ + Y+ W+ + L F +M
Sbjct: 235 EILDHARMNKPGQGFYKVLAESALRAVKLCQPLRVPNTGYERWKELQLNFDAREM 289
>gi|330814395|ref|YP_004358634.1| TolA protein [Candidatus Pelagibacter sp. IMCC9063]
gi|327487490|gb|AEA81895.1| TolA protein [Candidatus Pelagibacter sp. IMCC9063]
Length = 273
Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats.
Identities = 43/274 (15%), Positives = 107/274 (39%), Gaps = 9/274 (3%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEE--P 60
+ +++S+ LH+ F+LL PI+ ++++++D I + +
Sbjct: 1 MYRSVSLSVFLHLAFVLLTVLTLPFVKKEPITAQQLIAIDIIQISEKTQLPFAPKAREII 60
Query: 61 VVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPV 120
K +E +V + + + T + + K+ K +Q KE L
Sbjct: 61 EKIKKEKKKERVVTKQAPPKITPKEKPDTVPLPDQLKLKKKEEKKKKQNPKEVKELIRQS 120
Query: 121 SPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIA 180
S ++K+++ + + K+ + + + ++ + + +
Sbjct: 121 SEFEKKELFDPNK----IAALIDKSKEETADIQKKQSLELTQNQDNSVTLNKGITLSQQD 176
Query: 181 IVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVD---VVGGTELVRRMLRE 237
++ ++ WNIP + L V++ L + G +L +D + + ++L E
Sbjct: 177 AIKAQIYKCWNIPLGLPFDQNLLVRIKLVLKEDGSILSSEVLDHRRMNQPGQAYYKVLAE 236
Query: 238 NARKAVIKSQAFRLSPSTYKSWRNITLFFVPSKM 271
+A +AV ++ + Y W+++ L F +M
Sbjct: 237 SALRAVKLCDPLKMPTTGYNKWKDLQLNFDAKEM 270
>gi|154252568|ref|YP_001413392.1| hypothetical protein Plav_2121 [Parvibaculum lavamentivorans DS-1]
gi|154156518|gb|ABS63735.1| hypothetical protein Plav_2121 [Parvibaculum lavamentivorans DS-1]
Length = 277
Score = 149 bits (375), Expect = 4e-34, Method: Composition-based stats.
Identities = 43/274 (15%), Positives = 90/274 (32%), Gaps = 5/274 (1%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
+ N + +S+ H + + L F +P+ + L V+ + ++ + K + E
Sbjct: 1 MRNSVFLSVAAHFLVVALALVAFPSPEELPLVQTRALPVELVTIDEVTNLKRLQKTEKPK 60
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
+ V + E + + + E+ + + P
Sbjct: 61 PVEEPEPPKPVEPEKPKAEPKPQPAPAPPPPPEEKVEPIPDKEAEKKEPPKPVEKKVEKP 120
Query: 123 YDKQKISKATNKEQDLQGISFAEKKS--IDTVVVRPDKKELLSKVEKSSRKRIPSQDAIA 180
QK + Q + +K + +E + I
Sbjct: 121 KPPQKQPEPKKAFDPNQIAALLDKTPDTSSKPQPQEQAEEEFDSPVTDDPSAALTMSEID 180
Query: 181 IVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGG---TELVRRMLRE 237
+ ++ W++P+ ++L VK+ LNQ G + + R +
Sbjct: 181 AFKVQMRRCWSVPAGAPDAEQLIVKIKVYLNQDGSLAAPPELRDKTKLVTGGSYYRAAAD 240
Query: 238 NARKAVIKSQAFRLSPSTYKSWRNITLFFVPSKM 271
+A +A+ Q F++ Y SWR I L F P +M
Sbjct: 241 SAMRAIRLCQPFKMPAEKYTSWREIDLNFDPREM 274
>gi|108755185|emb|CAK32577.1| periplasmic protein TonB [uncultured organism]
Length = 296
Score = 148 bits (373), Expect = 8e-34, Method: Composition-based stats.
Identities = 43/295 (14%), Positives = 94/295 (31%), Gaps = 24/295 (8%)
Query: 1 MRLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP 60
M + G+ S++ H + L Y+ +P + V+ + ++ + +
Sbjct: 1 MVMRRGIVYSVLFHAVVLTAGYYGMPALRRLPPVMDAPIVVELVTVAAETNTPPPEAKPE 60
Query: 61 VVQFKGSSQENLVRDF---------------SVQENGDRFSDQTKTHATENETKRSSSSK 105
+ + + + K + +
Sbjct: 61 PEPEPEPKPKPEPKPAKAEPPPPPPPPEPEVATVPPPPAEQPKAKPEPKPKPKPKPKAKP 120
Query: 106 GEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVV------VRPDKK 159
+A A ++ P + +DL+ K+ +
Sbjct: 121 KPKAPPRLAKVKPRRKPRPPDIFASVLKTVEDLKPRPPKPKEKTEKKKKAEESFEAQVAM 180
Query: 160 ELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGK 219
L S+V + R + I +VR ++ WN+ + K + L +++ +N G V
Sbjct: 181 ALQSQVRRHDADRPITISEIDLVRRQIARCWNLQAGAKEAENLIIEISVAMNPDGTVRHA 240
Query: 220 INVDVVG-GTELVRRMLRENARKAVI--KSQAFRLSPSTYKSWRNITLFFVPSKM 271
+ + R E+A +AV+ + Q F+L Y W+ + L F P +M
Sbjct: 241 RIQNTDRVAGDPFYRAAAESALRAVLNPRCQPFKLPRDRYDRWQTMALIFDPKEM 295
>gi|328542543|ref|YP_004302652.1| TolA protein [polymorphum gilvum SL003B-26A1]
gi|326412289|gb|ADZ69352.1| TolA protein [Polymorphum gilvum SL003B-26A1]
Length = 325
Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats.
Identities = 42/323 (13%), Positives = 92/323 (28%), Gaps = 55/323 (17%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYH-------SSKYK 55
+ G S+ H+ L + + E LSVD I ED +++ +
Sbjct: 1 MRGGFIASVTGHLAVLAWGFIALPASERFEVKPVESLSVDLIPIEDVTRVLKGERNAELR 60
Query: 56 KIEEPVVQFKGSSQENLVRDFSVQENGD-------------------------------- 83
++ + + +
Sbjct: 61 EVAAVRPTETKRDDAPDPEKTTGEAKVEMPTPPSPRPAPQPVKAPEPPAPAPAPEPAPVK 120
Query: 84 ---------------RFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKI 128
+ + + A E + + + +K + P +
Sbjct: 121 PEPPKPEPVATPPEPAPAPEPEPKAAEAPAEAAPKTAEPTPVKVVPRTKPTPPPKTQTAQ 180
Query: 129 SKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIA 188
+ Q + K + + SQ + +R ++
Sbjct: 181 RPREDTFNPNQISALLNKIDPSGGGTAASTQPASLGTARGEANVRMSQSELDALRGQISR 240
Query: 189 NWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQA 248
WN P L V++ FQL G V G V + + R ++A +AV++
Sbjct: 241 CWNPPVGAAGADDLLVRLQFQLTVDGAVDGSPRV-LNSSSNPSFRAASDSAVRAVMRCAP 299
Query: 249 FRLSPSTYKSWRNITLFFVPSKM 271
+ L + Y++W+++ + F P ++
Sbjct: 300 YSLPGNKYETWKDVIINFDPREL 322
>gi|118588327|ref|ZP_01545736.1| hypothetical protein SIAM614_23637 [Stappia aggregata IAM 12614]
gi|118439033|gb|EAV45665.1| hypothetical protein SIAM614_23637 [Stappia aggregata IAM 12614]
Length = 320
Score = 135 bits (340), Expect = 5e-30, Method: Composition-based stats.
Identities = 45/320 (14%), Positives = 98/320 (30%), Gaps = 54/320 (16%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
+ GL S+ H LL F + + + L V+ + ED + + V
Sbjct: 1 MRAGLIASLAGHSALLLWGLIAFPDAESFAVPQVDSLPVELVPIEDITKLRIGEKTAEVR 60
Query: 63 QFKGSSQENLVRDFSVQENGDR-------------------------------------- 84
+ + +
Sbjct: 61 DVAAVNPSETPAEEPPKPAEKPGESRVEQPTPPTPTPPAPSPAPAPEPQPVADPEPAPAP 120
Query: 85 -------------FSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKA 131
+ ++ ++ + + + + P P + + K
Sbjct: 121 APEPAPVAEPAPSPAPDPAPAPEPVPQQQEAAPAPQPIVTKVSPRSKPTPPRNAPEPPKE 180
Query: 132 TNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWN 191
+D+ + + + T ++ L S+ + SQ + +R V WN
Sbjct: 181 NFNSKDVAALLNKIEPAKQTGETSQNEASLGSRRGQQDV--RMSQSELDALRGMVAQCWN 238
Query: 192 IPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRL 251
P + L+V++ F L+Q G V G+ V + +A +A+++ Q + L
Sbjct: 239 PPVGAVGAEDLKVRVRFNLSQDGQVSGQPEV-MNSSGNPAFGAASSSAVRAIMRCQPYNL 297
Query: 252 SPSTYKSWRNITLFFVPSKM 271
S Y++W+ + + F P +M
Sbjct: 298 PISKYEAWQEVIINFDPREM 317
>gi|307944544|ref|ZP_07659884.1| TolA, TolA protein [Roseibium sp. TrichSKD4]
gi|307772293|gb|EFO31514.1| TolA, TolA protein [Roseibium sp. TrichSKD4]
Length = 301
Score = 125 bits (314), Expect = 5e-27, Method: Composition-based stats.
Identities = 44/299 (14%), Positives = 91/299 (30%), Gaps = 31/299 (10%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
+ GL S+ H L F +P + L V+ + + + + +
Sbjct: 1 MRVGLIASVAGHSAIFLWGLIVFPGADTLPTPSVDPLPVELVPIAELTRLQKGEKTAEEI 60
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESAL------- 115
+ + Q + V +R +Q T + + E
Sbjct: 61 REVAALQPSETPVEDVPTPAERPGEQQVQQPTPPAPAPEPAPEPEPEPVAEPEPAPEPEP 120
Query: 116 -----------------------LRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTV 152
P + + + + Q + K +
Sbjct: 121 EVAPEPSPEAEPAPAPEPQPIITQARPRTKPKPPRPEPQRQENFNSQISALLNKVEPEGG 180
Query: 153 VVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQ 212
++ + + +Q + +R +V A WN P + LRV++ F L+Q
Sbjct: 181 ASSASQEPVSLGSRRGQENVQMTQSELDALRGQVSACWNPPVGAAGAEDLRVRVRFNLDQ 240
Query: 213 KGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPSTYKSWRNITLFFVPSKM 271
G V G V + R +A +A+++ + L + Y +W + L F P ++
Sbjct: 241 SGGVSGSPEVINNS-SNPAFRAAASSAVRAIMRCAPYSLPIAKYDAWEEVILNFDPKEL 298
>gi|114570967|ref|YP_757647.1| putative TolA [Maricaulis maris MCS10]
gi|114341429|gb|ABI66709.1| Cell division and transport-associated protein TolA [Maricaulis
maris MCS10]
Length = 271
Score = 121 bits (304), Expect = 7e-26, Method: Composition-based stats.
Identities = 32/269 (11%), Positives = 83/269 (30%), Gaps = 7/269 (2%)
Query: 5 NGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQF 64
GL +S+ +H + V + ++ ++ + + + + + + V
Sbjct: 2 RGLVLSLFVHGGVIAAGLIYLPRMTSVFEATP-IVPIELVTLGETTNIRAARPDPEPVVE 60
Query: 65 KGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYD 124
+ ++ + D + + + A + + E +
Sbjct: 61 EEPAET--IDDVIDEPEPEPAPEPEPVEAEPEIIDETPEAPTEPEPEPEPDPVEEAPEPA 118
Query: 125 KQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRN 184
++ + + + + + A++R+
Sbjct: 119 PERPAPERRPAEPSLNDMLGDLSRSVAETRDAQAVDEGPLRAAVGDGEQMTATLQAMIRS 178
Query: 185 RVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINV----DVVGGTELVRRMLRENAR 240
+ W D +L V++ L++ G + G + ++ R+ E A
Sbjct: 179 HLSRCWRASLDAPEPNELAVQLVLNLDRSGELTGPPRLTDQARILNSPNPYLRVAGERAL 238
Query: 241 KAVIKSQAFRLSPSTYKSWRNITLFFVPS 269
+A ++ Q + L P Y WR I + F PS
Sbjct: 239 RAAVQCQPYPLPPEAYSEWRQIEVNFSPS 267
>gi|298292995|ref|YP_003694934.1| TolA [Starkeya novella DSM 506]
gi|296929506|gb|ADH90315.1| putative TolA [Starkeya novella DSM 506]
Length = 320
Score = 121 bits (302), Expect = 1e-25, Method: Composition-based stats.
Identities = 50/319 (15%), Positives = 96/319 (30%), Gaps = 52/319 (16%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
+ GL S +LH L + +F+ +E + VD + + + K + P
Sbjct: 1 MRAGLVSSAVLHAGILGFMLVSFSS-AAPFEPMQESMPVDIVSDAEMSKMMAGKKDAPKK 59
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETK----------------------- 99
+ E E D D K +
Sbjct: 60 EAPKPIVEKTADTPKPPEQIDAKVDDKKPEVKAANEQTAPPPPPAENTPPEPKPPAAQAQ 119
Query: 100 ---------------RSSSSKGEQALKESALLRMP-----------VSPYDKQKISKATN 133
+ K + + P Q+ K
Sbjct: 120 AKPEPAPPKPAESLAAKPPEPKQDQPKPEQQAQAKPAPAPPRKPKDIPPKVVQQPPKDRE 179
Query: 134 KEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIP 193
+ + ++ + + S + SQ I +R R++ WN P
Sbjct: 180 FKPNEIAALLDKRTATRQASIGDTINNTASLGARVGSSATLSQTEIDALRARLMQLWNPP 239
Query: 194 SDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLS- 252
+ ++L V + +LN G + G V G + R++A +A+ + Q F +
Sbjct: 240 AGAANPEELIVTVRIRLNVDGTLNGPPMVVTSG-SSPFFMTARDSAIRAIFRGQPFDMLR 298
Query: 253 PSTYKSWRNITLFFVPSKM 271
P Y++W++I + F P +M
Sbjct: 299 PEKYEAWKDIEVTFDPREM 317
>gi|254500624|ref|ZP_05112775.1| hypothetical protein SADFL11_660 [Labrenzia alexandrii DFL-11]
gi|222436695|gb|EEE43374.1| hypothetical protein SADFL11_660 [Labrenzia alexandrii DFL-11]
Length = 313
Score = 119 bits (297), Expect = 5e-25, Method: Composition-based stats.
Identities = 40/311 (12%), Positives = 91/311 (29%), Gaps = 43/311 (13%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
+ GL S+ H +FL+ F + + E L VD + E++ + + V
Sbjct: 1 MRAGLIASLAGHSVFLVWGLIAFPDAKSFSVPQVETLPVDLVPIEEFTQLRLGEKNAEVR 60
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKR---------------------- 100
+ + + Q Q + +
Sbjct: 61 DVAALQPSDTPAEETPQPADKPGDSQVQQPSPPTTAPAPTPTPPEPEPVAEPEDAPEPAP 120
Query: 101 --------------------SSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQG 140
+ +++ + + + ++
Sbjct: 121 APEPVPAAEPEPAPEPEPVPQQEAAPAVQPILTSIAPRTKPAPPRPQRQEPRDESIVSDV 180
Query: 141 ISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFK 200
+ K + + + +Q + +R++V W+ P +
Sbjct: 181 AALLNKVEPAGQTGGQPETPASLGTRQGTPNIRMTQSELDALRSQVAMCWSPPVGAVGAE 240
Query: 201 KLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPSTYKSWR 260
L V++ F L+Q G V V + R +A +AV++ Q + L + Y +W+
Sbjct: 241 DLNVRVRFNLSQNGEVSNGPEV-MNSNANPAFRAAASSAVRAVMRCQPYSLPIAKYDAWQ 299
Query: 261 NITLFFVPSKM 271
+ + F P +M
Sbjct: 300 EVIINFDPREM 310
>gi|209886403|ref|YP_002290260.1| protein TolA [Oligotropha carboxidovorans OM5]
gi|209874599|gb|ACI94395.1| protein TolA [Oligotropha carboxidovorans OM5]
Length = 312
Score = 118 bits (296), Expect = 6e-25, Method: Composition-based stats.
Identities = 46/312 (14%), Positives = 102/312 (32%), Gaps = 45/312 (14%)
Query: 1 MRLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHS----SKYKK 56
M+++ LA S+ LH + + +F+ ++ S E L VD I + K K
Sbjct: 1 MKIDRTLAASVALHALVIGWGLVSFSTRMYE-TSPEESLPVDIISADQLAKVTQGIKTGK 59
Query: 57 IEEPVVQFKGSSQENLVRDFSVQENGDRFS-----------------------DQTKTHA 93
E + ++ + +D V + D+ D K A
Sbjct: 60 KEVTKPLVEKVAEPSPPQDDPVGKVDDKKQTVVTDAAPEPPPKPVEKPVEKKPDPPKPVA 119
Query: 94 TENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATN----------------KEQD 137
E + + ++ + + + + +K + +Q
Sbjct: 120 QEKPKEETKPAEKKPDPAKVDPIAEALKKEQAKKPAPKEQAKAAPPKPPEPKRDRVFDQS 179
Query: 138 LQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFK 197
++ V + + R S A+ +++V W P
Sbjct: 180 KIAALLDKRDPSRRSVTGSELNSQAALGLSHGRAADNSATWGAMFKSQVERCWKKPYGGI 239
Query: 198 RFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPSTYK 257
+++ +L + G + V + G R+ +E+AR+A+I+ Q ++L + ++
Sbjct: 240 EAQQIEASFDIRLKRDGTLEAMP-VPLPGSNSPYFRVYQESARRAIIECQPYKLPAAYFE 298
Query: 258 SWRNITLFFVPS 269
W+ F
Sbjct: 299 EWKFFEPVFTER 310
>gi|163758791|ref|ZP_02165878.1| hypothetical protein HPDFL43_15247 [Hoeflea phototrophica DFL-43]
gi|162284081|gb|EDQ34365.1| hypothetical protein HPDFL43_15247 [Hoeflea phototrophica DFL-43]
Length = 332
Score = 118 bits (295), Expect = 9e-25, Method: Composition-based stats.
Identities = 36/192 (18%), Positives = 73/192 (38%), Gaps = 1/192 (0%)
Query: 81 NGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQG 140
+ D +E + A P P + + + +
Sbjct: 140 PAETAPDPVAEAISEAAPAEPQFAALPSAGPVPQARPTPPRPQAPAQTASTRESDFNADE 199
Query: 141 ISFAEKKSIDTVVVRPDKKELLS-KVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRF 199
++ K E + +++R SQ + +R ++ WNI
Sbjct: 200 VAALLNKQDAAGGGAQRSTETAALGGARTTRGNTLSQSEMDALRGQIQRYWNIIPGMADG 259
Query: 200 KKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPSTYKSW 259
+RV + +L+ G ++G+ +V GG+ R L +A++AV+++Q ++L Y SW
Sbjct: 260 GDVRVTVKMRLDVSGNIVGQPDVSATGGSAGTRGTLASSAKRAVLRAQPYQLPAEKYDSW 319
Query: 260 RNITLFFVPSKM 271
+ + F PS+M
Sbjct: 320 SEVVVNFDPSQM 331
>gi|254294749|ref|YP_003060772.1| TonB domain-containing protein [Hirschia baltica ATCC 49814]
gi|254043280|gb|ACT60075.1| TonB domain-containing protein [Hirschia baltica ATCC 49814]
Length = 297
Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats.
Identities = 37/294 (12%), Positives = 90/294 (30%), Gaps = 30/294 (10%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKY-------- 54
+ GL +S+I H Y F + ++ ++ + D +
Sbjct: 1 MRPGLFLSLIFHAAIFGSAYVVFPMATTTMSEELIIVPIELVTVSDTTNLTAPQPDPVEE 60
Query: 55 ---------------KKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETK 99
++ P + S + + + Q + + + T
Sbjct: 61 PEPEPTPEPEEEAPPEEEPIPEEDAEVSDEPDPFAEEDGQTESEPEEVEPEPEETAEPEP 120
Query: 100 RSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKK 159
+ + +P K++ + N ++ K
Sbjct: 121 EPEVTPEPKPTPTPTPKVIPPKEEKKEQTNSFLNSVLQTTEDKKKTREREYKAAPDLKKV 180
Query: 160 ELLSKVEKSSRKRIP-SQDAIAIVRNRVI-ANWNIPSDFKRFKKLRVKMHFQLNQKGFVL 217
E ++ ++S+ R + ++++++ + PSD ++L+V N+ G ++
Sbjct: 181 ENANQNKRSAGDRSRDTATWTTMLKSKIETKCFRDPSDMANAERLQVTYKITFNKDGSLM 240
Query: 218 GKINVDVVG---GTELVRRMLRENARKAVIKSQAFR--LSPSTYKSWRNITLFF 266
G + R+ NA +A+ K + L Y W++ T F
Sbjct: 241 RSPRRISPTIIPGNDQQMRIFDINATRAIEKCAPYNDILPAEYYDEWKDFTFVF 294
>gi|299134177|ref|ZP_07027370.1| protein TolA [Afipia sp. 1NLS2]
gi|298590924|gb|EFI51126.1| protein TolA [Afipia sp. 1NLS2]
Length = 313
Score = 116 bits (289), Expect = 4e-24, Method: Composition-based stats.
Identities = 47/313 (15%), Positives = 98/313 (31%), Gaps = 46/313 (14%)
Query: 1 MRLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHS----SKYKK 56
M+++ LA S+ LH + + +F+ ++ ++ E L VD I + + K K
Sbjct: 1 MKIDRTLAASVALHALVISWGLISFSTKMYE-MTPEESLPVDIISADQFAKVTQGIKTGK 59
Query: 57 IEEPVVQFKGSSQENLVRDFSVQENGDRFSD----------------------------- 87
E + + +D V + D+
Sbjct: 60 KESVKPLVEKVADATPPQDDPVGKIEDKKPPVVTDTAPEPPPKPVEKPVEKKPEPPKPVA 119
Query: 88 -----------QTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQ 136
+ K + + + K + E + P K +Q
Sbjct: 120 QEKPKEETKPAEKKPDPAKVDPIAEALKKEQAKKPEPKKQQAQAKPTPPPKEKHERVFDQ 179
Query: 137 DLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDF 196
++ + + + R S A+ + +V W P
Sbjct: 180 TKIAALLDKRDPTRQSMTGSELNSQAALGLSHGRSADNSATWGAMFKQQVERCWKKPYGG 239
Query: 197 KRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPSTY 256
++++ +L Q G + V + G R+ +E+AR+A+I+ Q ++L PS +
Sbjct: 240 IEAQQIQASFDVRLKQDGTLEAMP-VPLPGSNTPYFRVYQESARRAIIECQPYKLPPSFF 298
Query: 257 KSWRNITLFFVPS 269
W+ F
Sbjct: 299 NEWKFFEPVFTER 311
>gi|148258090|ref|YP_001242675.1| putative TonB protein [Bradyrhizobium sp. BTAi1]
gi|146410263|gb|ABQ38769.1| Cell division and transport-associated protein TolA [Bradyrhizobium
sp. BTAi1]
Length = 336
Score = 114 bits (284), Expect = 1e-23, Method: Composition-based stats.
Identities = 43/323 (13%), Positives = 82/323 (25%), Gaps = 58/323 (17%)
Query: 1 MRLENGLAISMILHVMFLLLLYFNFN--VQLLVPISRREMLSVDNIYNEDYHSSKYKKIE 58
+R G +S+ LHV+ L F+F+ + P + + + +
Sbjct: 10 VRARKGTVLSVTLHVLVLGWGLFSFSARSMVAPPEDLVPVDVISEDNTSKAKAGALTGKK 69
Query: 59 EPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQ---ALKESAL 115
E E + V + + +T T K +++
Sbjct: 70 EVAKLLADKIGEKKPTEDIVGKVDPKPVTETDAAPTPQPKPEKPLEKKPDPPKPVEKQPD 129
Query: 116 LRMPVSP---------------------------------------------------YD 124
PV+ +
Sbjct: 130 TPKPVAEKKPEPPKPAPAEKPKPEEKKPDPFNPDQIASVLNKDKPKQPPKPQQAAAATPE 189
Query: 125 KQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRN 184
K + + +K V + + S +A+ +
Sbjct: 190 PPKHKSERKFDAEKMASLINQKDPTRQAVTGAELNANAALGSARGAAADNSASWVALFQQ 249
Query: 185 RVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVI 244
+V W P V + +L + G + G V V R R++A++A+I
Sbjct: 250 QVNRCWKPPYSGVDA-NPVVAFNVRLRRDGTLDGPP-VPVGAADTPFLRAYRDSAQRAII 307
Query: 245 KSQAFRLSPSTYKSWRNITLFFV 267
Q + L P Y W F
Sbjct: 308 ACQPYNLPPKLYDDWSYFQPVFN 330
>gi|154246986|ref|YP_001417944.1| putative TolA [Xanthobacter autotrophicus Py2]
gi|154161071|gb|ABS68287.1| putative TolA [Xanthobacter autotrophicus Py2]
Length = 317
Score = 113 bits (282), Expect = 3e-23, Method: Composition-based stats.
Identities = 42/313 (13%), Positives = 85/313 (27%), Gaps = 50/313 (15%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
+ GLA S +LH L+L +F E L VD + +Y +
Sbjct: 1 MRAGLAASTLLHAGVLVLTLVSFTG-AKPFEPMPESLPVDVVSISEYTKLTKGARNGQKL 59
Query: 63 QFKGSSQENL---------------------------------------------VRDFS 77
E + + S
Sbjct: 60 DKPKQVAEKVGDPTPVEDAKLKASEKAPVEATAPPPPPPPPPPKVEPLPKDAAPAKVEPS 119
Query: 78 VQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQD 137
+ + + + E + + L P + + + D
Sbjct: 120 PPKEQAELAPKPEQKKQEQPKDEAKTEAAAAPLPPRKPAPPKEQPKPVEANAAPSEFNTD 179
Query: 138 LQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFK 197
++ V S + + I R RV+ W+
Sbjct: 180 QIKQLLDKRAPSRQVASAEQVSTTSSLGSPRGEGQQLTASEIDAFRRRVMECWSTDGGNL 239
Query: 198 RFKKLRVKMHFQLNQKGFVLGKINVDV--VGGTELVRRMLRENARKAVIKSQAFRLS-PS 254
+ +RV ++ LN+ G V G ++ G + + N +A++ Q +++ P
Sbjct: 240 D-RNIRVDVNIYLNKDGTVAGTPQIEPGQSGSGQPAFQAYAMNGIRAIMACQPYKMFRPE 298
Query: 255 TYKSWRNITLFFV 267
TY +W+ + +
Sbjct: 299 TYANWKTLPITLN 311
>gi|150397826|ref|YP_001328293.1| putative signal peptide protein [Sinorhizobium medicae WSM419]
gi|150029341|gb|ABR61458.1| conserved hypothetical signal peptide protein [Sinorhizobium
medicae WSM419]
Length = 356
Score = 113 bits (281), Expect = 4e-23, Method: Composition-based stats.
Identities = 43/246 (17%), Positives = 93/246 (37%), Gaps = 3/246 (1%)
Query: 29 LLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQ 88
P + + E +++ + + K + + + + E + +
Sbjct: 110 EKAPPTPDPVKEEIEKVEETKPAAEPATEVAALPEPKQEVKPDTKPEPAPAEEQPTENPE 169
Query: 89 TKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQ--DLQGISFAEK 146
+ + T + + A R +QK + + + + + K
Sbjct: 170 AEALPDKVPTPQVKPKVEKPAQTAKTPERKKDEVQKEQKKASSQKESDFNADEIAALLNK 229
Query: 147 KSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKM 206
+ + +E +K++ SQ + +R ++ NW+I +R+K+
Sbjct: 230 QESSGGGAKRSTEEAALGGKKTTTGNTLSQSEMDALRGQIQNNWSIIPGMADAADVRIKV 289
Query: 207 HFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFR-LSPSTYKSWRNITLF 265
+L+ G ++G V+ GG++ RR L AR+A++KS F+ L Y SW + +
Sbjct: 290 RMRLDPNGELIGDPEVEASGGSDSARRALMGGARRAILKSAPFKGLPAEKYDSWSEVVVN 349
Query: 266 FVPSKM 271
F PS M
Sbjct: 350 FDPSSM 355
Score = 51.4 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/176 (12%), Positives = 50/176 (28%), Gaps = 1/176 (0%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
++ +A S +LH + L + ++ E L VD + E + + P
Sbjct: 1 MKGSIATSAVLHALVLTWALVSLGSPADFEVADVEALPVDIVPVESITQIQQGDKKAPAR 60
Query: 63 QFKGSSQENLVRDFSVQENG-DRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVS 121
+ EN + D + + S+ Q +++ PV
Sbjct: 61 EKASPVPTKKPTPVENAENVGENDVDLKTPPTPNAKPVDNESAAAPQKTEKAPPTPDPVK 120
Query: 122 PYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQD 177
++ E + + E K +P+ + ++
Sbjct: 121 EEIEKVEETKPAAEPATEVAALPEPKQEVKPDTKPEPAPAEEQPTENPEAEALPDK 176
>gi|51473506|ref|YP_067263.1| hypothetical protein RT0301 [Rickettsia typhi str. Wilmington]
gi|13235456|emb|CAC33749.1| hypothetical protein [Rickettsia typhi]
gi|51459818|gb|AAU03781.1| rickettsial conserved hypothetical protein [Rickettsia typhi str.
Wilmington]
Length = 320
Score = 113 bits (281), Expect = 4e-23, Method: Composition-based stats.
Identities = 45/307 (14%), Positives = 105/307 (34%), Gaps = 42/307 (13%)
Query: 7 LAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSS----KYKKIEEPVV 62
L+ S+ILH+M + F L +++S + D + K K+
Sbjct: 14 LSCSIILHLMLFYCVLFCMPSLLNKKFPEEQIISFEIFPLSDRSNIITQTKQKEDPIEHE 73
Query: 63 QFKGSSQENLVRDFS----VQENGDRFSDQTKTHATENETKRSSSSKGEQALKE------ 112
K S Q L + ++N +T + + + KG ++
Sbjct: 74 DAKKSEQSKLTTEAPQVISQEKNAKERETETIEEKSPIKESNTKEVKGTLLEQKGEVTQA 133
Query: 113 ---SALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSS 169
+ + +++K K +++ +K D + E S+ +
Sbjct: 134 KLNKEEGKTQGQKVRRPEVNKDNKKLLEIRKEVKQKKHKTDELDSLLKNLEQSSEGDNVK 193
Query: 170 RKR---------------------IPSQDAIAIVRNRVIANW-NIPSDFKRFKKLRVKMH 207
+ S ++++ ++ +W N+P+ + K+++ +
Sbjct: 194 SNKYQRLKKVDNPKEAKGVYTDMLPLSNSETSLIKRQIERHWINVPAGVRGNNKVKIIIS 253
Query: 208 FQLNQKGFVLGKINVDVVGGT--ELVRRMLRENARKAVIKSQAFRLS-PSTYKSWRNITL 264
L++ G V + + + L +NA +AV ++ P+ + W+ +
Sbjct: 254 ITLDKAGNVEQVRVIAKICPNIQSSICEALVDNAIRAVWQASPIENLDPARFNHWKEMNF 313
Query: 265 FFVPSKM 271
F PSK+
Sbjct: 314 IFDPSKL 320
>gi|315122877|ref|YP_004063366.1| signal peptide protein [Candidatus Liberibacter solanacearum
CLso-ZC1]
gi|313496279|gb|ADR52878.1| signal peptide protein [Candidatus Liberibacter solanacearum
CLso-ZC1]
Length = 265
Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats.
Identities = 124/275 (45%), Positives = 167/275 (60%), Gaps = 14/275 (5%)
Query: 1 MRLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP 60
MR+ENGLAIS+ILH +FLLLLY NFNVQL VP+S+ E S+ NI+N+D HS+KY +
Sbjct: 1 MRVENGLAISLILHFIFLLLLYLNFNVQLFVPVSKIEGSSIKNIHNDDLHSNKYSGDKNN 60
Query: 61 VVQFKGSSQENLVRD----FSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALL 116
+ S+E + F Q+N + DQ KT +E K+ S S+GE ALKES+
Sbjct: 61 EKEEVFHSREMSEKTGAHWFEDQQNNSKSFDQGKTQTIPDELKKFSDSEGEHALKESSPP 120
Query: 117 RMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQ 176
+ + P DK++ K Q + + V K+ + SQ
Sbjct: 121 NVSLRPLDKKQHIKNKAHSQHSTPSIIKKNIAKLPVPKIDTKQSRSN----------FSQ 170
Query: 177 DAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLR 236
+ I IVR R++ NWNIP D K+FKK++VKMHF LN+ GFV+G ++ VVGGTEL RR L
Sbjct: 171 NEIGIVRRRIMGNWNIPPDLKKFKKIQVKMHFSLNRNGFVIGNPDITVVGGTELARRTLV 230
Query: 237 ENARKAVIKSQAFRLSPSTYKSWRNITLFFVPSKM 271
++ARKA IKSQ FRL YK+WRN+T+ F+PSKM
Sbjct: 231 KSARKAFIKSQPFRLPADKYKNWRNMTIHFIPSKM 265
>gi|90418975|ref|ZP_01226886.1| putative TolA [Aurantimonas manganoxydans SI85-9A1]
gi|90337055|gb|EAS50760.1| putative TolA [Aurantimonas manganoxydans SI85-9A1]
Length = 357
Score = 112 bits (280), Expect = 5e-23, Method: Composition-based stats.
Identities = 35/205 (17%), Positives = 69/205 (33%)
Query: 67 SSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQ 126
Q + V + D + TK + + + + P K
Sbjct: 152 PPQPDPVEQAIAEAEAAPEPDPVPQNVPVPATKPKPPAPAPKVAETKPVETRKPEPTKKA 211
Query: 127 KISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRV 186
+ + D I+ K + S SQ + +R ++
Sbjct: 212 ETRTPEESQFDADQIAALLNKEKSAGGGAKRSDQQASLGTDRQTGGKLSQSELDALRGQI 271
Query: 187 IANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKS 246
W+ PS LR+ + +L+ G + + + GG ++ R+ E A +AV +
Sbjct: 272 QRCWSPPSGVSEAGSLRISIQMRLDPSGELEARPQIIGGGGGSMIERVAGEAALRAVQRC 331
Query: 247 QAFRLSPSTYKSWRNITLFFVPSKM 271
+ L Y +W ++ + F PS+M
Sbjct: 332 APYNLPAEKYDTWADVVVNFDPSQM 356
Score = 51.8 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 14/110 (12%), Positives = 40/110 (36%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
+++G+ +S +LH L ++ + + ++ E L VD + E++ S + PV
Sbjct: 1 MKSGVVLSTLLHGAVLTWGLWSLSAPEPLQMAPVESLPVDLVPIEEFSQSVIGAKDAPVT 60
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKE 112
+ + + + ++ + + + + A
Sbjct: 61 ETPAPNPTETPQTLPMPAENVGDNETDLATPPTPIKRPTPTEQAAAAQPS 110
>gi|92118973|ref|YP_578702.1| putative TolA [Nitrobacter hamburgensis X14]
gi|91801867|gb|ABE64242.1| Cell division and transport-associated protein TolA [Nitrobacter
hamburgensis X14]
Length = 314
Score = 112 bits (279), Expect = 6e-23, Method: Composition-based stats.
Identities = 38/313 (12%), Positives = 83/313 (26%), Gaps = 45/313 (14%)
Query: 1 MRLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDY----HSSKYKK 56
++++ LA S+ LHV+ + +F+ + + E L VD I + K K
Sbjct: 3 VKVDKTLAASIALHVLVIGWGLVSFSSKAFESVPE-ESLPVDVISADQLAHVTAGMKTGK 61
Query: 57 IEEPVVQFKGSSQENLVRDFSVQENGDRFS-------DQTKTHATENETKRSSSSKGEQA 109
E P + ++ + +V + D+ E ++
Sbjct: 62 KESPKPLVEKVAEATPPPEDTVGKIDDKKPPVVTDTAPPPVPKPVERPVEKKPDPPKPVV 121
Query: 110 LKESALLRMPVSPYDKQK--------------------------------ISKATNKEQD 137
+ P+ +Q
Sbjct: 122 ENKPKEEPKPIEKKPDPPKVDPIAEALKKEEAKKPKPKQQAKAAPPKPERPKAERVFDQS 181
Query: 138 LQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFK 197
++ + + S A+ + +V W P
Sbjct: 182 KIAALLDKRDPTRRSAAGDTLNSNAALGLAHGKAADNSATWGAMFKTQVERCWKKPYGGL 241
Query: 198 RFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPSTYK 257
+ +L + G + + R+ +E+A +A+I+ Q + L +
Sbjct: 242 EAQMTEAIFSIKLKRDGTLETTPTAISN-PSTPYFRVYQESALRAIIECQPYNLPAQFFD 300
Query: 258 SWRNITLFFVPSK 270
W+ F K
Sbjct: 301 EWKFFEPVFTERK 313
>gi|269958991|ref|YP_003328780.1| hypothetical protein ACIS_00972 [Anaplasma centrale str. Israel]
gi|269848822|gb|ACZ49466.1| hypothetical protein ACIS_00972 [Anaplasma centrale str. Israel]
Length = 281
Score = 111 bits (278), Expect = 9e-23, Method: Composition-based stats.
Identities = 42/269 (15%), Positives = 85/269 (31%), Gaps = 14/269 (5%)
Query: 7 LAISMILHVMFLLLLYFNFNVQLLVPISR----REMLSVDNIYNEDYHSSKYKKIEEPVV 62
+A+S++LHV +YF + + ++ + D S + + +
Sbjct: 18 VALSVLLHV-VAGGVYFAGTWAVERGKVQHDAGNPVIVFGPVPVADADSVQVGRQPVVLQ 76
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
+ K + + V E + + E E + + L
Sbjct: 77 RKKIERRSVEKAEQVVVEPIRKIPPPPGRKSMERERLVTQPQQQAAPPAVEPLPV----- 131
Query: 123 YDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIV 182
+ + + + E+ S + K + +
Sbjct: 132 --AADAQDFPETAEQELSGILQAVQREANIGPPGAENEVDSGEARYDEKHELAVRIANSI 189
Query: 183 RNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDV-VGGTELVRRMLRENARK 241
R++ + W +P+ K + + VK+ L G V+ D + + R + ++A +
Sbjct: 190 RSKFVECWTVPAGAKDVESMVVKVGVVLAPSGKVVRAGIADTHLYNSNPFFRAMADSALR 249
Query: 242 AVIKSQAFR-LSPSTYKSWRNITLFFVPS 269
AV K LS S Y W I L F P
Sbjct: 250 AVYKCSPLTGLSRSDYNLWHEIVLTFNPK 278
>gi|254708435|ref|ZP_05170263.1| hypothetical protein BpinM_16150 [Brucella pinnipedialis
M163/99/10]
gi|261315935|ref|ZP_05955132.1| TolA protein [Brucella pinnipedialis M163/99/10]
gi|261304961|gb|EEY08458.1| TolA protein [Brucella pinnipedialis M163/99/10]
Length = 110
Score = 111 bits (276), Expect = 1e-22, Method: Composition-based stats.
Identities = 30/108 (27%), Positives = 51/108 (47%)
Query: 164 KVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVD 223
+K++ SQ + +R + WN+P+ L V + +L + G + G V
Sbjct: 2 GGKKNTGGSKLSQSEMDALRGAISKCWNVPAGVADAPGLVVTVKMKLAEDGSIQGTPEVT 61
Query: 224 VVGGTELVRRMLRENARKAVIKSQAFRLSPSTYKSWRNITLFFVPSKM 271
GG + V R E+AR+AV++ + L Y SW + + F PS+M
Sbjct: 62 SGGGADGVARAAAESARRAVMRCAPYNLPVDKYDSWSEVIVNFDPSEM 109
>gi|254994807|ref|ZP_05276997.1| hypothetical protein AmarM_01382 [Anaplasma marginale str.
Mississippi]
Length = 281
Score = 111 bits (276), Expect = 1e-22, Method: Composition-based stats.
Identities = 40/268 (14%), Positives = 85/268 (31%), Gaps = 12/268 (4%)
Query: 7 LAISMILHVMFLLLLYFNFNVQLLVPISRRE---MLSVDNIYNEDYHSSKYKKIEEPVVQ 63
+A+S++LHV+ + + + ++ ++ + + + + + +
Sbjct: 18 VALSVLLHVVAGGVYFAGTWAMERGKVQHDAGNAVIVFGSVPVAEADNVRAGRQPVVLQK 77
Query: 64 FKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPY 123
K + + V E R A E E + + L
Sbjct: 78 RKVEYRPTEKAERVVVEPIKRIPPPPGRKAMERERLVTQPQQQAAPPAVEPLPV------ 131
Query: 124 DKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVR 183
+ + + + E+ S K K + +R
Sbjct: 132 -AADAQDFPETAEQELSGILQAVQREANIGPPGAENEVDSGEAKYDEKHELAVRIANSIR 190
Query: 184 NRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDV-VGGTELVRRMLRENARKA 242
+R + W +P+ K + + VK+ L G V+ D + + R + ++A +A
Sbjct: 191 SRFVECWTVPAGAKDVENMVVKVGVVLAPSGKVVRAGITDTHLYNSNPFFRAVADSALRA 250
Query: 243 VIKSQAFR-LSPSTYKSWRNITLFFVPS 269
V K L+ + Y W I L F P
Sbjct: 251 VYKCSPLMGLNRNDYNLWHEIVLTFNPK 278
>gi|146338268|ref|YP_001203316.1| putative TonB protein [Bradyrhizobium sp. ORS278]
gi|146191074|emb|CAL75079.1| Putative TonB protein [Bradyrhizobium sp. ORS278]
Length = 333
Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats.
Identities = 39/312 (12%), Positives = 78/312 (25%), Gaps = 46/312 (14%)
Query: 1 MRLENGLAISMILHVMFLLLLYFNFNV--QLLVPISRREMLSVDNIYNEDYHSSKYKKIE 58
+R G A+S+ HV+ L + F+F+ ++ P + + + + +
Sbjct: 10 LRTRKGTALSVAAHVIVLCVGLFSFSARPMVMPPEDLVPVDVISEDNTSRAKAGALQGKK 69
Query: 59 EPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRM 118
+ E + V + + +T K K A +
Sbjct: 70 DAPKLLADKIGEKKPTEDIVGKVDTKQVTETDAAPEPKPKPEKPVEKKPDPPKPVAEKKP 129
Query: 119 PVSP-------------------------------------------YDKQKISKATNKE 135
+ K +
Sbjct: 130 DPPKPAPAEKPKPEEKKPDPFNPDQIASVLNKDKPKPPKPQQQADATPPEPKHKSERKFD 189
Query: 136 QDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSD 195
+ +K V + + V +N P +
Sbjct: 190 AEKMASLINQKDPTRQAVTGAELNANAALGSSRGMSEANLASLQGAFSAAVKRCYNFPYN 249
Query: 196 FKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFR-LSPS 254
+ + L G V V V G + V + EN ++A ++ QA+ L
Sbjct: 250 GPDADQFWADVDINLQPDGSVASMSIVKVGGPSRSVANAIAENGKRATLQCQAYSFLPKQ 309
Query: 255 TYKSWRNITLFF 266
Y W+ I + F
Sbjct: 310 QYALWKMIPMRF 321
>gi|255002935|ref|ZP_05277899.1| hypothetical protein AmarPR_01262 [Anaplasma marginale str. Puerto
Rico]
gi|255004060|ref|ZP_05278861.1| hypothetical protein AmarV_01361 [Anaplasma marginale str.
Virginia]
Length = 281
Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats.
Identities = 40/268 (14%), Positives = 85/268 (31%), Gaps = 12/268 (4%)
Query: 7 LAISMILHVMFLLLLYFNFNVQLLVPISRRE---MLSVDNIYNEDYHSSKYKKIEEPVVQ 63
+A+S++LHV+ + + + ++ ++ + + + + + +
Sbjct: 18 VALSVLLHVVAGGVYFAGTWAMERGKVQHDAGNAVIVFGSVPVAEADNVRAGRQPVVLQK 77
Query: 64 FKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPY 123
K + + V E R A E E + + L
Sbjct: 78 RKVEYRPTEKAERVVVEPIKRIPPPPGRKAMERERLVTQPQQQAAPPAVEPLPV------ 131
Query: 124 DKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVR 183
+ + + + E+ S K K + +R
Sbjct: 132 -AADAQDFPETAEQELSGILQAVQREANIGPPGAENEVDSGEAKYDEKHELAVRIANSIR 190
Query: 184 NRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDV-VGGTELVRRMLRENARKA 242
+R + W +P+ K + + VK+ L G V+ D + + R + ++A +A
Sbjct: 191 SRFVECWTVPAGAKDVENMVVKVGVVLAPSGKVVRAGITDTHLYNSNPFFRAVADSALRA 250
Query: 243 VIKSQAFR-LSPSTYKSWRNITLFFVPS 269
V K L+ + Y W I L F P
Sbjct: 251 VYKCSPLMGLNRNDYNLWHEIVLTFNPK 278
>gi|17986621|ref|NP_539255.1| hypothetical protein BMEI0338 [Brucella melitensis bv. 1 str. 16M]
gi|17982235|gb|AAL51519.1| hypothetical protein BMEI0338 [Brucella melitensis bv. 1 str. 16M]
Length = 180
Score = 109 bits (273), Expect = 3e-22, Method: Composition-based stats.
Identities = 35/168 (20%), Positives = 67/168 (39%), Gaps = 3/168 (1%)
Query: 104 SKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLS 163
+ K+ + S + S++ N + + K+ + +
Sbjct: 15 TAKTNERKQPEEKKKTQS---ASQTSQSKNDAIADEVAALLNKQKASGGGAKRSTDQASL 71
Query: 164 KVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVD 223
+K++ SQ + +R + WN+P+ L V + +L + G + G V
Sbjct: 72 GGKKNTGGSKLSQSEMDALRGAISKCWNVPAGVADAPGLVVTVKMKLAEDGSIQGTPEVT 131
Query: 224 VVGGTELVRRMLRENARKAVIKSQAFRLSPSTYKSWRNITLFFVPSKM 271
GG + V R E+AR+AV++ + L Y SW + + F PS+M
Sbjct: 132 SGGGADGVARAAAESARRAVMRCAPYNLPVDKYDSWSEVIVNFDPSEM 179
>gi|148555049|ref|YP_001262631.1| hypothetical protein Swit_2134 [Sphingomonas wittichii RW1]
gi|148500239|gb|ABQ68493.1| hypothetical protein Swit_2134 [Sphingomonas wittichii RW1]
Length = 270
Score = 109 bits (273), Expect = 3e-22, Method: Composition-based stats.
Identities = 38/271 (14%), Positives = 89/271 (32%), Gaps = 12/271 (4%)
Query: 5 NGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQF 64
GL IS+ HV L++L N +P E + V + S+
Sbjct: 7 AGLGISIAGHVALLVILSLNLMSVRKLP-KLSEPMDVMLVDKAGLTSAAP-------EVS 58
Query: 65 KGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYD 124
K Q + E + + + + +P
Sbjct: 59 KEPPQAAQAPEVGPTEETPPEPTPAPPKPQPAPPTPPRPAPTPKPAPKPVPQKPAPTPAP 118
Query: 125 KQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRN 184
++ + K T + + + + + ++ I +A++ +
Sbjct: 119 EKAVEKPTPAPAKPKPKATSLGTDFLKGIPVEKSTGKAAAPRAAAISPIAMNGLVALIAS 178
Query: 185 RVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGG----TELVRRMLRENAR 240
+V + IP+ + ++ +L + G + V G + R + E A
Sbjct: 179 QVKPCYTIPAGGTDTTSIISRIRLRLKKDGSIAAAPEVIGNLGVTPANQPYVRQMNEAAT 238
Query: 241 KAVIKSQAFRLSPSTYKSWRNITLFFVPSKM 271
+A+ + ++L P +++W+++ F P++M
Sbjct: 239 RALQRCAPYKLPPDLFEAWQDLIFTFRPAQM 269
>gi|56416593|ref|YP_153667.1| hypothetical protein AM328 [Anaplasma marginale str. St. Maries]
gi|222474960|ref|YP_002563375.1| hypothetical protein AMF_245 [Anaplasma marginale str. Florida]
gi|56387825|gb|AAV86412.1| hypothetical protein AM328 [Anaplasma marginale str. St. Maries]
gi|222419096|gb|ACM49119.1| Conserved hypothetical protein [Anaplasma marginale str. Florida]
Length = 283
Score = 109 bits (273), Expect = 3e-22, Method: Composition-based stats.
Identities = 40/268 (14%), Positives = 85/268 (31%), Gaps = 12/268 (4%)
Query: 7 LAISMILHVMFLLLLYFNFNVQLLVPISRRE---MLSVDNIYNEDYHSSKYKKIEEPVVQ 63
+A+S++LHV+ + + + ++ ++ + + + + + +
Sbjct: 20 VALSVLLHVVAGGVYFAGTWAMERGKVQHDAGNAVIVFGSVPVAEADNVRAGRQPVVLQK 79
Query: 64 FKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPY 123
K + + V E R A E E + + L
Sbjct: 80 RKVEYRPTEKAERVVVEPIKRIPPPPGRKAMERERLVTQPQQQAAPPAVEPLPV------ 133
Query: 124 DKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVR 183
+ + + + E+ S K K + +R
Sbjct: 134 -AADAQDFPETAEQELSGILQAVQREANIGPPGAENEVDSGEAKYDEKHELAVRIANSIR 192
Query: 184 NRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDV-VGGTELVRRMLRENARKA 242
+R + W +P+ K + + VK+ L G V+ D + + R + ++A +A
Sbjct: 193 SRFVECWTVPAGAKDVENMVVKVGVVLAPSGKVVRAGITDTHLYNSNPFFRAVADSALRA 252
Query: 243 VIKSQAFR-LSPSTYKSWRNITLFFVPS 269
V K L+ + Y W I L F P
Sbjct: 253 VYKCSPLMGLNRNDYNLWHEIVLTFNPK 280
>gi|239832784|ref|ZP_04681113.1| TolA protein [Ochrobactrum intermedium LMG 3301]
gi|239825051|gb|EEQ96619.1| TolA protein [Ochrobactrum intermedium LMG 3301]
Length = 356
Score = 109 bits (272), Expect = 4e-22, Method: Composition-based stats.
Identities = 40/213 (18%), Positives = 75/213 (35%)
Query: 59 EPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRM 118
+PV + + E+ D + + E K +
Sbjct: 143 KPVEKQEVKPDPVAEAIDKQAESPDAQTPKLPDKVPAPEAKPKPPQAQTAKTPDRKPTEE 202
Query: 119 PVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDA 178
+ S++ N + + K+ + + +K++ SQ
Sbjct: 203 KKPTQSASQSSQSKNDAIADEVAALLNKQKAAGGGAKRSTDQASLGGKKNTGGSKLSQSE 262
Query: 179 IAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLREN 238
+ +R + WN+P+ L V + +LNQ G + G V GG + V R E+
Sbjct: 263 MDALRGAISKCWNVPAGVADAPGLIVTVKMKLNQDGSIQGVPEVTSGGGGDGVGRAAAES 322
Query: 239 ARKAVIKSQAFRLSPSTYKSWRNITLFFVPSKM 271
A++AV + + L Y SW + + F PS+M
Sbjct: 323 AKRAVARCAPYNLPVDKYDSWSEVIVNFDPSEM 355
>gi|144897898|emb|CAM74762.1| TolA, tolA protein [Magnetospirillum gryphiswaldense MSR-1]
Length = 153
Score = 109 bits (271), Expect = 5e-22, Method: Composition-based stats.
Identities = 25/137 (18%), Positives = 51/137 (37%), Gaps = 1/137 (0%)
Query: 136 QDLQGISFAEKKSIDTVVVRPD-KKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPS 194
DL + K + + K + + + + S + +R V WNIP+
Sbjct: 13 DDLLKATDKAKPNTPSAEKGNQPKPQNVRGSDMHNPNAPISMTEMDRIRKHVSDRWNIPA 72
Query: 195 DFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPS 254
K L +++ + G V ++ + + ++AR+AV + +
Sbjct: 73 GAKDAANLIIEIRVSVQPDGTVTDAQIINAPLMADSFWQAAADSARRAVRLASPLPIPRD 132
Query: 255 TYKSWRNITLFFVPSKM 271
Y +R+ L F P +M
Sbjct: 133 KYDQFRDFVLTFNPKQM 149
>gi|304393325|ref|ZP_07375253.1| TolA protein [Ahrensia sp. R2A130]
gi|303294332|gb|EFL88704.1| TolA protein [Ahrensia sp. R2A130]
Length = 343
Score = 109 bits (271), Expect = 5e-22, Method: Composition-based stats.
Identities = 38/342 (11%), Positives = 87/342 (25%), Gaps = 73/342 (21%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYK------- 55
++ G+ +S + H L + +P E L ++ + ++ +
Sbjct: 1 MKTGVVLSSVAHAAILGFAMVSIGAPKPLPALEVEALPIELVSISEFTRNVKGDRKATNE 60
Query: 56 --------------KIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTK----------- 90
V ++ ++ +
Sbjct: 61 NPPAPKETQRQVSLPAARTVGDAAKDTEVQAEKEAPAPPVEKTEAPTPTPKPEPVKEPEP 120
Query: 91 ---------------------------------------THATENETKRSSSSKGEQALK 111
+ + +
Sbjct: 121 PKAKPEPKPPEPAPPEPKAAEAEPEPPKPEPKTDIAMLLKENQPVAEPTETQADPDVLKL 180
Query: 112 ESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRK 171
+ P + + + + + ++ K++ +K +
Sbjct: 181 PDQVAAPKARPTRPAPEAAPAKETDATKKATVNKAETSGGGAKASTKEKAGLGTKKGATS 240
Query: 172 RIPSQDAIAIVRNRVIANWNIP--SDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTE 229
SQ I VR R+ WN+ S K+R + F+LN+ G + G++ G
Sbjct: 241 GKLSQSTIDAVRGRLSGCWNVAALSGHPDAAKMRATVDFKLNRDGTIDGRVRPKTSGTDG 300
Query: 230 LVRRMLRENARKAVIKSQAFRLSPSTYKSWRNITLFFVPSKM 271
R +L R A+ + L Y +W+ T+ F + M
Sbjct: 301 PTRAILAVAVRSAIESCAPYNLPADKYDTWKEFTVNFSLADM 342
>gi|88607845|ref|YP_505511.1| TonB family protein [Anaplasma phagocytophilum HZ]
gi|88598908|gb|ABD44378.1| TonB family protein [Anaplasma phagocytophilum HZ]
Length = 275
Score = 108 bits (270), Expect = 7e-22, Method: Composition-based stats.
Identities = 51/272 (18%), Positives = 92/272 (33%), Gaps = 33/272 (12%)
Query: 13 LHVMFLLLLYFNFNVQLLVPISRREMLSVDNI---YNEDYHSSKYKKIEEPV-------- 61
+H++ LL++ V L+V S E V N D + K + V
Sbjct: 21 IHIISSLLVHLVMGVFLVVRTSPPESYGVSTASCCPNCDGVAIKSQARTADVDYITSAGS 80
Query: 62 -VQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPV 120
V +S E++ R + G + QT RS + A +E ++ PV
Sbjct: 81 QVANLVNSTEDVQRSGLFTKPGIQPPSQTSKKPARMSLARSDIAVNTLASQEDLMVVQPV 140
Query: 121 SPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIA 180
Y++Q ++ TN + + ++ ++ +
Sbjct: 141 YEYEQQSGARYTNPHK-------------------KGFFGYSKSIFQNVLNNHAPEEVVD 181
Query: 181 IVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVV-GGTELVRRMLRENA 239
+ + W IP+ VK+ ++ G V D + + R L ++A
Sbjct: 182 SLSEQFAKCWTIPAGIDDDSNAVVKIKLAMDPSGKVTTATISDTNLYDNDPLYRALADSA 241
Query: 240 RKAVIKSQAF-RLSPSTYKSWRNITLFFVPSK 270
+AV K L + Y W I L F P +
Sbjct: 242 LRAVHKCNPITELRGTDYSIWNEIVLTFNPQQ 273
>gi|15966493|ref|NP_386846.1| putative signal peptide protein [Sinorhizobium meliloti 1021]
gi|307300470|ref|ZP_07580250.1| putative signal peptide protein [Sinorhizobium meliloti BL225C]
gi|307318335|ref|ZP_07597770.1| putative signal peptide protein [Sinorhizobium meliloti AK83]
gi|15075764|emb|CAC47319.1| Hypothetical signal peptide protein [Sinorhizobium meliloti 1021]
gi|306896017|gb|EFN26768.1| putative signal peptide protein [Sinorhizobium meliloti AK83]
gi|306904636|gb|EFN35220.1| putative signal peptide protein [Sinorhizobium meliloti BL225C]
Length = 356
Score = 108 bits (270), Expect = 7e-22, Method: Composition-based stats.
Identities = 43/246 (17%), Positives = 93/246 (37%), Gaps = 3/246 (1%)
Query: 29 LLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQ 88
P + + E +++ + + K + + + + E + +
Sbjct: 110 EKAPPTPDPVKEEIEKVEETKPAAEPATEVAALPEPKQEVKPDTKPEPAPAEEQPAENPE 169
Query: 89 TKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQ--DLQGISFAEK 146
+ T + + A R +QK + + + + + K
Sbjct: 170 AEALPDRVPTPQVKPKVEKPAQTAKTPERKKEEVKKEQKKASSQKESDFNADEIAALLNK 229
Query: 147 KSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKM 206
+ + +E +K++ SQ + +R ++ NW+I +R+K+
Sbjct: 230 QESSGGGAKRSTEEAALGGKKTTSGNTLSQSEMDALRGQIQNNWSIIPGMADAADVRIKV 289
Query: 207 HFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFR-LSPSTYKSWRNITLF 265
+L+ G ++G+ V+ GG++ RR L AR+A++KS F+ L Y SW + +
Sbjct: 290 TMRLDPNGDLIGEPEVEASGGSDAARRALMGGARRAILKSVPFKGLPADKYDSWSEVVVN 349
Query: 266 FVPSKM 271
F PS M
Sbjct: 350 FDPSSM 355
Score = 54.1 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/176 (12%), Positives = 50/176 (28%), Gaps = 1/176 (0%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
++ +A S +LH + L + ++ E L VD + E + + P
Sbjct: 1 MKGSIATSAVLHALVLTWALVSLGSPADFEVADVEALPVDIVPVESITQIQQGDKKAPAK 60
Query: 63 QFKGSSQENLVRDFSVQENG-DRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVS 121
+ EN + D + + S+ Q +++ PV
Sbjct: 61 EKASPVPTKKPTPVENAENVGENDVDLKTPPTPNVKPVENESAAAPQKTEKAPPTPDPVK 120
Query: 122 PYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQD 177
++ E + + E K +P+ + ++
Sbjct: 121 EEIEKVEETKPAAEPATEVAALPEPKQEVKPDTKPEPAPAEEQPAENPEAEALPDR 176
>gi|295688122|ref|YP_003591815.1| TolA protein [Caulobacter segnis ATCC 21756]
gi|295430025|gb|ADG09197.1| TolA protein [Caulobacter segnis ATCC 21756]
Length = 271
Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats.
Identities = 36/270 (13%), Positives = 72/270 (26%), Gaps = 11/270 (4%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPV 61
R+ L S+ LH L+ F + PI+ E + V + N P
Sbjct: 8 RVSPALLASIALHGAVAALIAFGLPWKSSKPITIGESVPVTIVTNGP-------TNVRPA 60
Query: 62 VQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVS 121
+ T + + A +
Sbjct: 61 EEAPVEQTAQAPEPEPQATPQPPAPTPAPTPTPAPAPPPKPTPVPKPAPTPTPAKPTQQK 120
Query: 122 PYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAI 181
D + + + S + + ++ S A+
Sbjct: 121 KTDNNDFFASLEATIAKTKKATGKPTSNAAKGPARQETSVSARPAL-GAATGLSASALGR 179
Query: 182 VRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARK 241
++ V WN + + + V++ F + G V+G+ + V + + A +
Sbjct: 180 LQGEVQDRWNPNCEVEGGANVNVRVVFVIGPGGRVVGQPESPGTSSPDPVVKAASDRAIR 239
Query: 242 AVIKSQAFR-LSPSTYKSWRNITLFFVPSK 270
A+ + F L Y I L F +
Sbjct: 240 ALFAASPFAYLPSDLYGQ--KIALNFNAKQ 267
>gi|292571912|gb|ADE29827.1| Periplasmic protein TonB, links inner and outer membranes
[Rickettsia prowazekii Rp22]
Length = 320
Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats.
Identities = 46/307 (14%), Positives = 103/307 (33%), Gaps = 42/307 (13%)
Query: 7 LAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSS----KYKKIEEPVV 62
L+ S++LH++ + F +++S + + D + K K+
Sbjct: 14 LSCSIVLHLLLFYFVLFAMPSLFNKKFPEEQIISFEILPVSDQSNIITQTKQKEDPIKHE 73
Query: 63 QFKGSSQENLVRDFSV---QENGDRFSDQTKTHATENETKRSSSSKGEQALKESALL--- 116
K S Q + S QE + + + + ++ E L+ +
Sbjct: 74 DSKKSEQSKFKAEASQAVSQEKNAKAREIETIEEKKTIKESNTKEAKETFLERKEEVAKA 133
Query: 117 -------RMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSS 169
+ V K +++K K ++ +K D + E S+ +
Sbjct: 134 KLKEEWGKKQVQQVRKPEVNKDNKKLLEINKEVKHKKHKTDELDSLLKNLEQSSEGDNVK 193
Query: 170 RKR---------------------IPSQDAIAIVRNRVIANW-NIPSDFKRFKKLRVKMH 207
+ S ++++ ++ +W NIP+ + K+++ +
Sbjct: 194 SNKYNRLKKVDNLKEAKGVYTDMLPLSDSETSLIKRQIERHWINIPAGVRGNNKVKIIIS 253
Query: 208 FQLNQKGFVLGKINVDVVGGT--ELVRRMLRENARKAVIKSQAFRLS-PSTYKSWRNITL 264
LN+ G V + + L +N +AV ++ P+ + W+ I
Sbjct: 254 ITLNKAGNVDQVRVKAKICPNIQSSICEALVDNVMRAVWQASPIENLDPARFNHWKEINF 313
Query: 265 FFVPSKM 271
F PSK+
Sbjct: 314 IFDPSKL 320
>gi|299135150|ref|ZP_07028341.1| conserved hypothetical protein [Afipia sp. 1NLS2]
gi|298590127|gb|EFI50331.1| conserved hypothetical protein [Afipia sp. 1NLS2]
Length = 274
Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 38/266 (14%), Positives = 84/266 (31%), Gaps = 14/266 (5%)
Query: 4 ENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQ 63
G A+S++ HV L + F V+L P ++V+ + +D + K + P +
Sbjct: 16 RVGGAVSVMAHVALLAWVVFGSGVKLYDP--PPPAINVELVPAKDAPAEKSGDLSLPSLD 73
Query: 64 FKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPY 123
+ + +D++K + E ++ K +
Sbjct: 74 TAKGDD---------AKQDEPKADESKPEEPKAEEPKAEEPKIDDKALTPVPEETKPVAE 124
Query: 124 DKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVR 183
+ + Q + + + + P L D +A R
Sbjct: 125 PQTPPPEPPALPQAAITGAPTVQPDVMSQYGDPFMSGLG-GFTPDQVAADLKTDVVAAFR 183
Query: 184 NRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAV 243
+ + +P+ R+ + L + G + + + ++ + A A+
Sbjct: 184 AHLKSCLKLPAGVAPTDDARIVLRVALKRDGKLARTPAL-MAAKATPKGPLIMKAAIHAL 242
Query: 244 IKSQAFRL-SPSTYKSWRNITLFFVP 268
Q + + YK WR + L F P
Sbjct: 243 EACQPYSMLPAEKYKEWRELDLEFTP 268
>gi|209550777|ref|YP_002282694.1| signal peptide protein [Rhizobium leguminosarum bv. trifolii
WSM2304]
gi|209536533|gb|ACI56468.1| putative signal peptide protein [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 148
Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats.
Identities = 21/117 (17%), Positives = 47/117 (40%), Gaps = 1/117 (0%)
Query: 156 PDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGF 215
E + S+ + I +R+ + N+ + + +H +L++ G
Sbjct: 30 NADAETTGRANDSATATHLTGAEIDALRDAIENNFVVDGRMNDDGNVYATIHVKLDRDGQ 89
Query: 216 VLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRL-SPSTYKSWRNITLFFVPSKM 271
++G +V GG+E R+ +A+ ++ F + Y W+ + L F S +
Sbjct: 90 IVGVPDVKASGGSERTRKSFAAAGVRAIRRAAPFTMLPKDKYDGWKEVILNFDTSAL 146
>gi|153008548|ref|YP_001369763.1| TolA protein [Ochrobactrum anthropi ATCC 49188]
gi|151560436|gb|ABS13934.1| TolA protein [Ochrobactrum anthropi ATCC 49188]
Length = 356
Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats.
Identities = 42/229 (18%), Positives = 77/229 (33%), Gaps = 4/229 (1%)
Query: 47 EDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKG 106
+ E + + + E D + + K
Sbjct: 127 KPETKPTPVPATEVQAKPEEKQEVKPDPVAEAIEKQAETPDAETPKLPDKVPAPDAKPKP 186
Query: 107 EQALKESALLRMPVSPYDKQKISKATNKEQ----DLQGISFAEKKSIDTVVVRPDKKELL 162
QA R P + + T+K + + + K+ + +
Sbjct: 187 PQAQTAKTPDRKPTEDKKPTQNAAQTSKSKNDAIADEVAALLNKQKAAGGGAKRSTDQAS 246
Query: 163 SKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINV 222
+K++ SQ + +R + WN+P+ L V + +LNQ G + G V
Sbjct: 247 LGGKKNTGGSKLSQSEMDALRGAISKCWNVPAGVADAPGLVVTVKMKLNQDGSIQGVPEV 306
Query: 223 DVVGGTELVRRMLRENARKAVIKSQAFRLSPSTYKSWRNITLFFVPSKM 271
GG + V R E+A++AV + + L Y SW + + F PS+M
Sbjct: 307 TSGGGGDGVGRAAAESAKRAVARCAPYNLPVDKYDSWSEVIVNFDPSEM 355
Score = 35.3 bits (79), Expect = 9.0, Method: Composition-based stats.
Identities = 24/171 (14%), Positives = 52/171 (30%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
++ GL S+ LH + + L +F+ + E VD + E + + P+
Sbjct: 1 MKAGLTSSVALHAVAVALAVVSFSSPKAFDVQDSESFPVDIVPIESMTQIQQGEKTAPMK 60
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
+ + EN T+T + + + E + + + P
Sbjct: 61 EKSAPVPTTKPQTVPNAENFGDQDIDTQTPPKPDAKAKPIEAAEEPKAQPEPVKKPEPKP 120
Query: 123 YDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRI 173
K + T A+ + V P + + + E +
Sbjct: 121 DPKPEQKPETKPTPVPATEVQAKPEEKQEVKPDPVAEAIEKQAETPDAETP 171
>gi|15891233|ref|NP_356905.1| hypothetical protein Atu3715 [Agrobacterium tumefaciens str. C58]
gi|15159596|gb|AAK89690.1| conserved hypothetical protein [Agrobacterium tumefaciens str. C58]
Length = 384
Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats.
Identities = 39/245 (15%), Positives = 86/245 (35%), Gaps = 1/245 (0%)
Query: 28 QLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSD 87
+P ++ E+ + + + +N+ R S E +
Sbjct: 139 MAALPQTKPEIAPQPKPEPPPQETKAEEPPPATQEPAEIPVPQNVPRPNSRPEPPKQAET 198
Query: 88 QTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKK 147
+ + + + K S + S + + K+
Sbjct: 199 KPAEQKPAEKPAEKKPDQAKSTDKPSDKKPGEKKQETAKSASSKESDFNADDVAALLNKQ 258
Query: 148 SIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMH 207
+ + + +KS+ SQ + +R + NW I +RV++
Sbjct: 259 APSGGGAKRSTQTASLGGKKSTGGSTLSQTEMDALRGAIQKNWQIIPGMADAADVRVRVT 318
Query: 208 FQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAF-RLSPSTYKSWRNITLFF 266
+L++ G ++G+ ++ GG+E RR L A +A+++S F L Y +W + + F
Sbjct: 319 MKLDRDGTIIGRPEIEATGGSEGTRRALSGGAYRAIMRSAPFTNLPADKYDAWNEVVVNF 378
Query: 267 VPSKM 271
PS++
Sbjct: 379 DPSEL 383
Score = 49.5 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 20/193 (10%), Positives = 49/193 (25%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
++ L S I+H L + + +S+ E L V+ + E+ + P
Sbjct: 1 MKGSLTTSAIVHASLLAFALVSLGSPEPLDVSQAEALPVELVPIEELSQIQQGDKNAPKA 60
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
+ +N + T + + +E +
Sbjct: 61 EKSAPVPTTRPDIIPNAQNIGNNVADIEAPPTPTTKPNDNIAAAAPPKQEKPQPVVDTKA 120
Query: 123 YDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIV 182
+ ++I K Q ++ + + + + I +
Sbjct: 121 NEVKEIVKEETSAPKPQEMAALPQTKPEIAPQPKPEPPPQETKAEEPPPATQEPAEIPVP 180
Query: 183 RNRVIANWNIPSD 195
+N N
Sbjct: 181 QNVPRPNSRPEPP 193
>gi|297539677|ref|YP_003675446.1| protein TolA [Methylotenera sp. 301]
gi|297259024|gb|ADI30869.1| protein TolA [Methylotenera sp. 301]
Length = 275
Score = 106 bits (263), Expect = 4e-21, Method: Composition-based stats.
Identities = 34/271 (12%), Positives = 91/271 (33%), Gaps = 10/271 (3%)
Query: 4 ENGLAISMILHVMFLLLLYFNFNVQLLVP-ISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
+++ +H+ L L +FN + ++ E+ D+I N+ + + +P+V
Sbjct: 11 WKAGGLAIAVHLALLGALLISFNWKAAHTTLNVTEVELWDSIPNQAVPAPVVQPEPKPIV 70
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
+ + + V+E T + + ++ + +++ + +
Sbjct: 71 KEEIKPEPKPEPKPIVEEKPKEEPQVDITLEKKKKALELKKAEDQLKKEKALEQKKQLDA 130
Query: 123 YDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSK-VEKSSRKRIPSQDAIAI 181
+ + + + A KK + K+S +
Sbjct: 131 LKLEALKDDAKPAVKVSKPNDALKKLQQEALAEEKTAGEQQALSSKASANAGVVGEFKNK 190
Query: 182 VRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARK 241
+++++ N + ++ L G + G + G+ E +
Sbjct: 191 IQSKIKGN--VTKALCGEGNPELRFDISLLPTGELSGSPKLVKSSGSA----ACDEAVER 244
Query: 242 AVIKSQAFRLS--PSTYKSWRNITLFFVPSK 270
A++ S+ L P+ + +RN+ L F P+
Sbjct: 245 AIMASEPLPLPTDPTLFSQFRNLNLKFRPND 275
>gi|85858719|ref|YP_460921.1| tolA protein [Syntrophus aciditrophicus SB]
gi|85721810|gb|ABC76753.1| tolA protein [Syntrophus aciditrophicus SB]
Length = 271
Score = 106 bits (263), Expect = 5e-21, Method: Composition-based stats.
Identities = 31/270 (11%), Positives = 76/270 (28%), Gaps = 17/270 (6%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
L L +S++LH L L + ++ +V + + D
Sbjct: 17 LRRMLVLSLLLHAFALSLFFVCVPKASSPKLTFGPDYAVSLVSSADLRMDGGNSSR---- 72
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
+ + + + + + + K E ++ L +
Sbjct: 73 ELAKELADIPEPEPATLPAAPAKPEGKVSRSEPASLSPVPVRKVEPMKRQDGALGKAIEE 132
Query: 123 YDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIV 182
++ S + + + + +
Sbjct: 133 IRRRVESAGQKQASAPAYPGGGITSDSP-------IGGSPAGAVGDAELGARMKAYYGSI 185
Query: 183 RNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKA 242
R+ +W++P D + + +H ++ + G V G G + E+A +A
Sbjct: 186 WMRIKRHWSMPPDLLPRQNIEAVIHVRILRSGAVEGISFEQRSGNS-----YFDESAMRA 240
Query: 243 VIKSQAFRLSPSTY-KSWRNITLFFVPSKM 271
V K+ F P + + + F S++
Sbjct: 241 VRKASPFPPLPEGTGEEGIEMGIRFHSSEL 270
>gi|158422147|ref|YP_001523439.1| putative TolA protein [Azorhizobium caulinodans ORS 571]
gi|158329036|dbj|BAF86521.1| putative TolA protein [Azorhizobium caulinodans ORS 571]
Length = 341
Score = 106 bits (263), Expect = 5e-21, Method: Composition-based stats.
Identities = 28/211 (13%), Positives = 62/211 (29%), Gaps = 2/211 (0%)
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
+ + Q+ + K + E K + Q P
Sbjct: 126 DEPKPAPPKADKPPPEQKADEGLKADPKKDEQKQEAKAQTPPPLPQRKPPPPPTPQPTRA 185
Query: 123 YDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIV 182
+ K + + D ++ + + + + +Q I +
Sbjct: 186 NNDAKTQQEQKFDADRIAALLDKRTPQRNAAADQQVSQTAALGSPNGAAQTLTQSEIDAL 245
Query: 183 RNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGG-TELVRRMLRENARK 241
R R+ + W P+ LR + Q G + + + V + ++A +
Sbjct: 246 RARIQSCWGPPAGASEASDLRATIVVSFKQDGSLAMQPQLSGVTPASSPYGPAFADSALR 305
Query: 242 AVIKSQAFR-LSPSTYKSWRNITLFFVPSKM 271
A+I+ + L + Y W+ I + F M
Sbjct: 306 AIIRCAPYTFLPANKYAVWKEIEMGFSLKDM 336
>gi|260431109|ref|ZP_05785080.1| possible TolA protein [Silicibacter lacuscaerulensis ITI-1157]
gi|260414937|gb|EEX08196.1| possible TolA protein [Silicibacter lacuscaerulensis ITI-1157]
Length = 365
Score = 105 bits (261), Expect = 8e-21, Method: Composition-based stats.
Identities = 35/250 (14%), Positives = 72/250 (28%), Gaps = 7/250 (2%)
Query: 26 NVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRF 85
L P E V + + P S + D
Sbjct: 116 PPVLAEPEPEPE---VTVLPALPEAQPRPADKVAPEPIAPPPPDAKPDDVESPAVSLDEG 172
Query: 86 SDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAE 145
++ + + + ++ +A + L + + D+
Sbjct: 173 AEIQQEQQDQTAPEEATDQIVTEAEQSDDLSPQRSPRPRPRPSRPQPAAQPDVAEADAPT 232
Query: 146 KKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVK 205
+ D + +R V WN+ S + V
Sbjct: 233 NPAPQDQAAINDALAEALGASDEPAGPPLTGGEKDAMRLAVSRCWNVGSLSTDALQTVVV 292
Query: 206 MHFQLNQKGFVL--GKINVDVVGGTELVRRMLRENARKAVIKSQA--FRLSPSTYKSWRN 261
+ F LN+ G ++ +D GG+ + + AR+A+++ A + L Y W++
Sbjct: 293 VGFSLNRDGTIVPGSLRMLDSSGGSAGAAKQAFDAARRAILRCGAKGYDLPADKYAHWKD 352
Query: 262 ITLFFVPSKM 271
I + F P +M
Sbjct: 353 IEITFNPERM 362
>gi|227823309|ref|YP_002827281.1| putative TolA outer membrane protein [Sinorhizobium fredii NGR234]
gi|227342310|gb|ACP26528.1| putative TolA outer membrane protein [Sinorhizobium fredii NGR234]
Length = 356
Score = 104 bits (260), Expect = 9e-21, Method: Composition-based stats.
Identities = 48/246 (19%), Positives = 93/246 (37%), Gaps = 3/246 (1%)
Query: 29 LLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQ 88
P + + E +S+ + + K + + + E + +
Sbjct: 110 EKAPPTPDPVKEEIQKVEEPKPASEPATEVAALPEPKQEVKPETKPEPAPAEEQPAENPE 169
Query: 89 TKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQ--DLQGISFAEK 146
+ + T + + A R +QK + + + + + K
Sbjct: 170 AEALPDKVPTPQVKPKVEKPAQTAKTPERKKEETKKEQKKASSQKESDFNADEIAALLNK 229
Query: 147 KSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKM 206
+ + +E +K++ SQ + +R ++ NW+I +R+K+
Sbjct: 230 QESSGGGAKRSTEEAALGGKKTTSGNTLSQSEMDALRGQIQNNWSIIPGMADAADVRIKV 289
Query: 207 HFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFR-LSPSTYKSWRNITLF 265
FQL+ G ++G+ V+ GG+E RR L AR+AV+KS F L Y SW + +
Sbjct: 290 TFQLDPNGELIGEPEVEATGGSEAARRALASGARRAVLKSAPFTALPKDKYDSWSEVVVN 349
Query: 266 FVPSKM 271
F PS M
Sbjct: 350 FDPSSM 355
Score = 59.5 bits (142), Expect = 4e-07, Method: Composition-based stats.
Identities = 28/180 (15%), Positives = 54/180 (30%), Gaps = 3/180 (1%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
++ GLA S +LH + L + ++ E L VD + D + + P
Sbjct: 1 MKGGLATSAVLHALVLTWALVSLGSPAEFEVADVEALPVDIVPITDMTQIQQGDKKAPAK 60
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
+ + EN + D T + A E P
Sbjct: 61 EKASPVPTKKP---TPVENAENIGDNDVDLKTPPKPDAKPIENESAAAPEKTEKAPPTPD 117
Query: 123 YDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIV 182
K++I K + + + V+P+ K + E+ + ++ V
Sbjct: 118 PVKEEIQKVEEPKPASEPATEVAALPEPKQEVKPETKPEPAPAEEQPAENPEAEALPDKV 177
>gi|85714381|ref|ZP_01045369.1| TolA [Nitrobacter sp. Nb-311A]
gi|85698828|gb|EAQ36697.1| TolA [Nitrobacter sp. Nb-311A]
Length = 336
Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 40/336 (11%), Positives = 88/336 (26%), Gaps = 67/336 (19%)
Query: 1 MRLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYH----SSKYKK 56
++++ LA S+ LHV+ + +F+ + + E L VD I + K K
Sbjct: 3 VKVDKTLAASVALHVLVIGWGLVSFSSKAFESVPE-ESLPVDIISADQLAHVTAGMKTGK 61
Query: 57 IEEPVVQFKGSSQE--------------NLVRDFSVQENGDRFSDQTKTHATENETKRSS 102
E P + ++ V D K +
Sbjct: 62 KENPKPLVEKVAEPTPPQEDIVGKIEDKKPPVVTDVAPKEQPKPDDKAAAEAAAAAKAEA 121
Query: 103 SSKGEQALKESALLRMPVSPYDKQKIS--------------------------------- 129
+K A ++ + + +
Sbjct: 122 VAKAADAKAKAEAKAKAEAAKAQAEAVAEAKAKAKAEAQAKAKAKAKAEAKAKAKAEAKA 181
Query: 130 --------------KATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPS 175
+Q ++ V + + S
Sbjct: 182 KAEAEAKAQAAAKRAERVFDQSKIAALLDKRDPTRHSVAGDTLNSNAALGLAHGKAADNS 241
Query: 176 QDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRML 235
A+ +++V W P + +L + G + + R+
Sbjct: 242 ATWGAMFKSQVERCWKKPYGGLEAQMTEAVFSIKLKRDGTLETTPTAISN-PSTPYFRVY 300
Query: 236 RENARKAVIKSQAFRLSPSTYKSWRNITLFFVPSKM 271
+E+A +A+I+ Q ++L + + W+ F K+
Sbjct: 301 QESALRAIIECQPYKLPAAYFDEWKFFEPVFTERKL 336
>gi|16127461|ref|NP_422025.1| hypothetical protein CC_3231 [Caulobacter crescentus CB15]
gi|221236274|ref|YP_002518711.1| TolA protein [Caulobacter crescentus NA1000]
gi|13424915|gb|AAK25193.1| hypothetical protein CC_3231 [Caulobacter crescentus CB15]
gi|220965447|gb|ACL96803.1| TolA protein [Caulobacter crescentus NA1000]
Length = 270
Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats.
Identities = 40/274 (14%), Positives = 80/274 (29%), Gaps = 22/274 (8%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
L L S+ LH ++ F + PI+ E + V + N
Sbjct: 9 LSPALLGSIALHGAVAAVIAFGLPWKQSKPITIGESVPVTIVTNGP-------------- 54
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
++E L + + T T + + + P
Sbjct: 55 TNVRPAEEALEEQTAQTPEPTPEATPQPPAPTPAPTPTPAPAAPAKPTPAPKPTPKPTPA 114
Query: 123 YDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSR-----KRIPSQD 177
+ + L+ +K+ K ++ S+R S
Sbjct: 115 KPTPQKKADNDFFASLEASIAKTQKATGKPTANAPKGPARAETSVSARPAMGAATGLSAA 174
Query: 178 AIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRE 237
A+ ++ V WN + + + V++ F + G V+G+ + V + +
Sbjct: 175 ALGRLQGEVQDRWNPNCEVEGGSNVNVRVVFVIGPGGRVVGQPESPGTSSPDPVVKAASD 234
Query: 238 NARKAVIKSQAFR-LSPSTYKSWRNITLFFVPSK 270
A +A+ + F L Y I L F +
Sbjct: 235 RAIRALFAASPFAYLPSDLYGQ--KIALNFNAKQ 266
>gi|126733594|ref|ZP_01749341.1| TonB domain protein, putative [Roseobacter sp. CCS2]
gi|126716460|gb|EBA13324.1| TonB domain protein, putative [Roseobacter sp. CCS2]
Length = 368
Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats.
Identities = 32/233 (13%), Positives = 71/233 (30%), Gaps = 6/233 (2%)
Query: 44 IYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSS 103
+ + + + N+ + D ++ + T +
Sbjct: 134 VEVSETQTPPQAPTVASTINAPPPPDANVDDVVRDEVVPDDSAEAAVVQEEQEATAPEET 193
Query: 104 SKGEQAL--KESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKEL 161
+ + P P + + A Q+ + E D
Sbjct: 194 TTAIVIEDLASVRPIARPSRPTPPVETASAEQPAQEEPVAADPEPTQDDVAAALEAALSA 253
Query: 162 LSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKIN 221
+ + R V WN+ ++ V++ F L+++G V G
Sbjct: 254 TPDAPAVAAGPPMTGAERDSFRVAVNRCWNVDPGSVAA-RVTVEVGFSLDREGRVQGNEV 312
Query: 222 -VDVVGGTELVRRMLRENARKAVIKSQA--FRLSPSTYKSWRNITLFFVPSKM 271
+ G + E AR+A+++ Q+ ++L Y W+++ + F PS M
Sbjct: 313 RLISSDGDQAATNTAFEAARRAILRCQSGGYQLPADKYDQWQDVVITFDPSGM 365
>gi|222086974|ref|YP_002545508.1| signal peptide protein [Agrobacterium radiobacter K84]
gi|221724422|gb|ACM27578.1| signal peptide protein [Agrobacterium radiobacter K84]
Length = 139
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 33/111 (29%), Positives = 58/111 (52%), Gaps = 1/111 (0%)
Query: 162 LSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKIN 221
S+ + K SQ + + +V NWNIP+D K+RV +H +L++ G ++G
Sbjct: 27 GSQTVDGADKTGFSQAEMLALHEQVTRNWNIPADLPHANKVRVAVHMKLDRSGQIIGSPE 86
Query: 222 VDVVGGTELVRRMLRENARKAVIKSQAFR-LSPSTYKSWRNITLFFVPSKM 271
V GG E R + ++A +AV++S F+ L Y +W+ + + F S +
Sbjct: 87 VTATGGPEQTRNAVAKSASRAVLRSAPFKNLPLDKYDAWKEVIINFDTSNL 137
>gi|84687706|ref|ZP_01015579.1| tonB domain protein, putative [Maritimibacter alkaliphilus
HTCC2654]
gi|84664289|gb|EAQ10780.1| tonB domain protein, putative [Rhodobacterales bacterium HTCC2654]
Length = 360
Score = 102 bits (253), Expect = 6e-20, Method: Composition-based stats.
Identities = 33/251 (13%), Positives = 65/251 (25%), Gaps = 10/251 (3%)
Query: 31 VPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTK 90
+ + D + + EP + + E +
Sbjct: 107 PTEDVQPETTEPTPPEADRVAPEIAPEPEPQAEIAPEVAPEVAPSEEAVETPPEEEQEAT 166
Query: 91 THATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGIS-------- 142
+ + + + +++ + + A +
Sbjct: 167 QPEAATTEIVTEAETPQSSAPTTSIRPQARPERPEPPVETAAPDPTPEPDPTPEPAEERD 226
Query: 143 FAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKL 202
D V + + + +R V WN+ S K
Sbjct: 227 PIADAVADAVNDALTSDTQGQTDQPAPLGPPLTSGERDGLRLAVSQCWNLGSSSTDAMKT 286
Query: 203 RVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKS--QAFRLSPSTYKSWR 260
V + Q+ G G V G T+ + + AR+AVI+ + L Y+ WR
Sbjct: 287 TVVVLVQMQPNGVPSGIELVSSEGPTQDAVQTAFQAARRAVIRCGANGYNLPSEKYEQWR 346
Query: 261 NITLFFVPSKM 271
I + F P M
Sbjct: 347 EIEMTFNPENM 357
Score = 48.7 bits (114), Expect = 7e-04, Method: Composition-based stats.
Identities = 18/174 (10%), Positives = 49/174 (28%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
++ G IS I H + +L L F + + V I E++ + + P
Sbjct: 1 MKTGYYISGIGHGLLILWLLFGGIFEFRSEEPFVPVADVSIISEEEFAALTAPPVGAPEP 60
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
+ ++ + E + + + ++ +P
Sbjct: 61 EEAAPTETPVPPARPEPEPEPQPEPEPVPEPEPTPLPEPPAPAPSLPTEDVQPETTEPTP 120
Query: 123 YDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQ 176
+ +++ E + Q E + + E + + ++
Sbjct: 121 PEADRVAPEIAPEPEPQAEIAPEVAPEVAPSEEAVETPPEEEQEATQPEAATTE 174
>gi|27382264|ref|NP_773793.1| hypothetical protein bll7153 [Bradyrhizobium japonicum USDA 110]
gi|27355435|dbj|BAC52418.1| bll7153 [Bradyrhizobium japonicum USDA 110]
Length = 319
Score = 101 bits (252), Expect = 8e-20, Method: Composition-based stats.
Identities = 35/318 (11%), Positives = 89/318 (27%), Gaps = 49/318 (15%)
Query: 1 MRLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP 60
+ ++ L S+ LHV+ L F+ + ++ E L +D I ++ +
Sbjct: 3 VNVDKTLVASIALHVLVLGWGLVTFSSRAY--VAPEESLPIDIISSDQLAKMMSGQKTGE 60
Query: 61 VVQFKGSSQENLVRDFS------------------------------------------- 77
+ K ++
Sbjct: 61 KDKPKPKVEKIAEPKPEEDAVGKVTEKKELIKTNATPEPPPKPVEKPVEKKPEPPKPVAE 120
Query: 78 VQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQD 137
+ + + K + + K E + V+ Q+ K + D
Sbjct: 121 AKPKEEPKPQEKKPDPAKEDPIAELQKKLETKKPPPKPVEQKVAAVQPQQQPKPKERSFD 180
Query: 138 LQGIS--FAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSD 195
I ++ + + S + + V + +
Sbjct: 181 PAQIQRDLDKRAATRHELAGTALNASASLGSTTGTAANNVATWRGAFQGAVKRCFTPTYN 240
Query: 196 FKRFKKLRVKMHFQLNQKGFVLGKINVDV-VGGTELVRRMLRENARKAVIKSQAFR-LSP 253
+ + + + G + + V G + + + + E+A++A+++ Q + +
Sbjct: 241 GQDADQYEADIDIPMKIDGSLASEPIVVAVRGPSRSIAQAVAESAKRAIVQCQVYSFMPK 300
Query: 254 STYKSWRNITLFFVPSKM 271
Y+SW+ I + F M
Sbjct: 301 QQYESWKLIPMTFGLKDM 318
>gi|91978609|ref|YP_571268.1| putative TolA [Rhodopseudomonas palustris BisB5]
gi|91685065|gb|ABE41367.1| putative TolA [Rhodopseudomonas palustris BisB5]
Length = 325
Score = 101 bits (252), Expect = 8e-20, Method: Composition-based stats.
Identities = 34/322 (10%), Positives = 83/322 (25%), Gaps = 56/322 (17%)
Query: 1 MRLENGLAISMILHVMFLLLLYFNFNVQLLV--PISRREMLSVDNIYNEDYHSSKYKKIE 58
M+++ LA S+ LHV+ L +F+ + P + ++ + +
Sbjct: 1 MKIDKTLAASVALHVLVLGWAMLSFSSKAFELEPQDSVAVDTISEDQLAKVMAGMRTGKK 60
Query: 59 EPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATEN---------------------- 96
E E + +V + ++ T T
Sbjct: 61 ENPKPLVEKVAEAKPVEDTVGKISEKAPVVTDTSPPPQPKPVEKPVEKKPEPPKPVVKEE 120
Query: 97 -------------------------------ETKRSSSSKGEQALKESALLRMPVSPYDK 125
+ + ++ + +
Sbjct: 121 PKKEEKKAEKKPDPPKEEAKEAEKKPDPKVDPIAEALKKEEKKKPPPPKPQTEAAAKPEP 180
Query: 126 QKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNR 185
K +Q ++ V + + S A+ +++
Sbjct: 181 VKPKAERVFDQSKIAALLDKRDPTRQAVAGDALNSNAALGLSKGKSADNSATWGAMFQSQ 240
Query: 186 VIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIK 245
V W P ++ +L + G + + R+ +E+A +A+I+
Sbjct: 241 VERCWKKPYGGIEAQRAEAAFVIRLKRDGSLESMPQPEGH-PATPYLRVYQESALRAIIE 299
Query: 246 SQAFRLSPSTYKSWRNITLFFV 267
Q + L + + W+ F
Sbjct: 300 CQPYNLPAAFFDEWKFFAPVFT 321
>gi|218672946|ref|ZP_03522615.1| putative signal peptide protein [Rhizobium etli GR56]
Length = 155
Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 50/117 (42%), Gaps = 1/117 (0%)
Query: 156 PDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGF 215
E + + S ++RN + + + S K +R+ + +L + G
Sbjct: 37 DANAETADRRNSDANSPRISAAEAQVLRNAIERQFIVDSRLKDIGSVRLTIRIKLARDGQ 96
Query: 216 VLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRL-SPSTYKSWRNITLFFVPSKM 271
++G +V V GG E ++ L ++ +AV ++ F + Y +W+ + F S +
Sbjct: 97 IVGNPDVQVTGGGERAQKSLTDSGLRAVRRAAPFTMLPKDKYDAWKEVVFNFDTSAL 153
>gi|254472921|ref|ZP_05086319.1| TolA protein [Pseudovibrio sp. JE062]
gi|211957642|gb|EEA92844.1| TolA protein [Pseudovibrio sp. JE062]
Length = 311
Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats.
Identities = 50/309 (16%), Positives = 97/309 (31%), Gaps = 41/309 (13%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
+ GL S+++HV+ L+ + N + + + L VD + + + E +
Sbjct: 1 MRAGLIASLVVHVVVLVAGAVSLNFGKELSTAPVDSLPVDLVPVSELTKLQLGTKEAKEI 60
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRS------------------SSS 104
+ + E + + E + +
Sbjct: 61 KEAALQPTKKPAEKPEPEKKTGEAKKEVKKVQEAKREVQQAETPPPPPEPAEPEPAPKEV 120
Query: 105 KGEQALKESALLRMPVSPYDKQKISKATNKEQD----------------------LQGIS 142
E+A E+A L V +K K + +
Sbjct: 121 PKEKAPAETAELGPEVEKTEKPKQLVKVRPRSKPKPPARPKAPKKEKPKKKEDFNSKMAA 180
Query: 143 FAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKL 202
K ++ + K E SQ + +R +V WN P + L
Sbjct: 181 LLNKTNVKSSGTAKSAKPASLGSELGQTNVKMSQSELDALRGQVAQCWNPPVGAAGAEDL 240
Query: 203 RVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPSTYKSWRNI 262
V++ F L++ G V G++ V + R +A +AV + + L + Y +W+ +
Sbjct: 241 NVRLQFNLSRTGEVEGQMQV-LNSSNNPTFRAAASSAERAVYRCGPYSLPAAKYDAWKTV 299
Query: 263 TLFFVPSKM 271
L F P M
Sbjct: 300 ILNFDPRDM 308
>gi|114706799|ref|ZP_01439699.1| Proline-rich region:Proline-rich extensin:Histamine H3 receptor
[Fulvimarina pelagi HTCC2506]
gi|114537747|gb|EAU40871.1| Proline-rich region:Proline-rich extensin:Histamine H3 receptor
[Fulvimarina pelagi HTCC2506]
Length = 361
Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats.
Identities = 35/246 (14%), Positives = 74/246 (30%), Gaps = 4/246 (1%)
Query: 29 LLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQ 88
L P+ E + E + ++ E + + + + Q
Sbjct: 114 LPDPVPEPEAVPEPAPMPEPEPEPEPQEAESEPEAPAPDPVSEAIEQAAEEPDPTPAPPQ 173
Query: 89 TKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKIS-KATNKEQDLQGISFAEKK 147
+ E + +P ++ K+ D I+ K
Sbjct: 174 NVPVPQNKPERPKPVEVAEAKPEPPKRPEPKETPEPEKPAETKSEENAFDADQIAALLNK 233
Query: 148 SIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMH 207
+++ + + + S I +R W PS + + +++
Sbjct: 234 EKSAGGGAKRQQQTAALGGRETTGATLSTSEIDALRRATKDCWYEPSGSFGSEGIVIEVS 293
Query: 208 FQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQ---AFRLSPSTYKSWRNITL 264
F+L + G + GG RR ++A +AV ++LS +Y +W +T
Sbjct: 294 FELERDGTLQTLPRASASGGDPATRRAYEDSAVRAVRICAQTGRYQLSADSYDAWSELTF 353
Query: 265 FFVPSK 270
F P
Sbjct: 354 NFRPGD 359
>gi|83859801|ref|ZP_00953321.1| TolA protein [Oceanicaulis alexandrii HTCC2633]
gi|83852160|gb|EAP90014.1| TolA protein [Oceanicaulis alexandrii HTCC2633]
Length = 275
Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats.
Identities = 30/271 (11%), Positives = 72/271 (26%), Gaps = 5/271 (1%)
Query: 1 MRLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP 60
MR G +S+ +H + F + ++ V+ + + + + E
Sbjct: 1 MRQALGFILSLFIHAGLIASALIAFPHTRRLTEELT-VVPVELVTLARETNVRVARPEPE 59
Query: 61 VVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPV 120
+ + + Q + + + + E P
Sbjct: 60 PEPEEVIETPAPQPAPEPEPEPVQPEAQPEVIPPAPQDEPEPEPEPTPPEPEPEPEPEPE 119
Query: 121 SPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIA 180
+ +E + E + + + A
Sbjct: 120 PVPTPRPREPEPRQESLDLNALSQLVDRSRDNAAPQGQAETGEQRNRVGAGTDMTASLQA 179
Query: 181 IVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINV----DVVGGTELVRRMLR 236
+ + + +D LRV + +L + G + + ++ R+
Sbjct: 180 MAASHMNRCIRSNADAPANMDLRVSLEIRLERNGRLSVPPRLIDEARIMNSPNSFLRVAG 239
Query: 237 ENARKAVIKSQAFRLSPSTYKSWRNITLFFV 267
E A + I+ Q + L P Y WR + +
Sbjct: 240 ERALRGAIECQPYPLPPEHYAQWRVLRVNVD 270
>gi|86748803|ref|YP_485299.1| hypothetical protein RPB_1680 [Rhodopseudomonas palustris HaA2]
gi|86571831|gb|ABD06388.1| conserved hypothetical protein [Rhodopseudomonas palustris HaA2]
Length = 281
Score = 99.6 bits (246), Expect = 4e-19, Method: Composition-based stats.
Identities = 33/273 (12%), Positives = 86/273 (31%), Gaps = 7/273 (2%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
+ G+A S++ H+ + + V+ + + + VD + ++ + +
Sbjct: 7 IRAGVAASVLAHLGLVGAVLLFAEVRPFAEVPEQR-IEVDVVTADEAPPAPEPVAKTKPA 65
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
+ + + Q+ + K + E + + + + + P
Sbjct: 66 LELPEFKPTAESEPAAQQPPAKSEPAQKQEPAKPEPAKPEPVQKQATAPKPEPPKAEPPP 125
Query: 123 YDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKK----ELLSKVEKSSRKRIPSQDA 178
+ + V+ + + S DA
Sbjct: 126 PPAPTPQAQQQAQPPTPAPFPPAIAQEPDLTVKYSVALGLPTDPAFDGPAEIAADISADA 185
Query: 179 IAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLREN 238
+A +R R+ + +P+ +R+ + L G + + + + L +
Sbjct: 186 VAALRQRIKSCAALPASVGPSDNVRIVLRVALLPDGRLAQEPILIEASASTK-GPALMQG 244
Query: 239 ARKAVIKSQAFRLSP-STYKSWRNITLFFVPSK 270
A A++K Q + + P YK W+ + + F P
Sbjct: 245 AIDALVKCQPYAMLPNDKYKDWKLLDIGFTPQD 277
>gi|255264561|ref|ZP_05343903.1| possible TolA protein [Thalassiobium sp. R2A62]
gi|255106896|gb|EET49570.1| possible TolA protein [Thalassiobium sp. R2A62]
Length = 367
Score = 99.6 bits (246), Expect = 4e-19, Method: Composition-based stats.
Identities = 42/250 (16%), Positives = 92/250 (36%), Gaps = 8/250 (3%)
Query: 29 LLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLV----RDFSVQENGDR 84
++ +V N + + + + + V SVQ++
Sbjct: 116 PPAEPQTPQVETVTNTVIGTSPRPRPRPAPRVAPEAVVQPEPDAVIADTTQDSVQDDAPA 175
Query: 85 FSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFA 144
+ T+ + +++ +A +E+A + ++P + ++ + + +
Sbjct: 176 ETPVTEEAQQATTQEEATTETVTEADQEAAGEEIVLAPTSSPRPPVRPSRPEPTETATAP 235
Query: 145 EKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRV 204
++ D + + S R V WN+ + + + + V
Sbjct: 236 SNETTDAINDLLGDLATEEPAASTPTGPPLSGAEKEGFRIAVNNCWNVDAGSRAAE-VTV 294
Query: 205 KMHFQLNQKGFVLG-KINVDVVGGTELVRRMLRENARKAVIKSQA--FRLSPSTYKSWRN 261
K+ F L+Q G V G V GG +R E AR+AV++ Q+ + L Y+ W++
Sbjct: 295 KVGFALDQNGRVSGDVRMVGASGGDTGAQRTAYEAARRAVLRCQSSGYDLPAEKYEQWKD 354
Query: 262 ITLFFVPSKM 271
+ + F PS M
Sbjct: 355 VEITFDPSGM 364
Score = 46.8 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 19/176 (10%), Positives = 44/176 (25%), Gaps = 1/176 (0%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQL-LVPISRREMLSVDNIYNEDYHSSKYKKIEEPV 61
+ G IS HV + + + +P E+ V + +
Sbjct: 1 MSTGTYISGAGHVGLIGFMILGWGFSADPLPFEVTEVSVVTAEEFDALSGVAQPTVPTDE 60
Query: 62 VQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVS 121
V + E D + E + + + E E
Sbjct: 61 PPAPQVPDVEDVVEPPAVEEPPAAPDAPEPVEAPVEDTQPVAPEIETPAIEVTDAPPAEP 120
Query: 122 PYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQD 177
+ + T + + VV+P+ +++ + S + +
Sbjct: 121 QTPQVETVTNTVIGTSPRPRPRPAPRVAPEAVVQPEPDAVIADTTQDSVQDDAPAE 176
>gi|218662998|ref|ZP_03518928.1| putative TolA outer membrane protein [Rhizobium etli IE4771]
Length = 378
Score = 99.6 bits (246), Expect = 5e-19, Method: Composition-based stats.
Identities = 37/245 (15%), Positives = 82/245 (33%), Gaps = 2/245 (0%)
Query: 29 LLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQ 88
+ P + + + E+ + + + D
Sbjct: 132 VEQPKEVASIPPPKPVEVTPPKPEEKAPEEQAKPEEPPKPEAEALPDNVPTPVAKPQVKP 191
Query: 89 TKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKS 148
+ + + + + A K + + + S + + + K
Sbjct: 192 PEPQKPAEKPPEKAQDQPKTADKPTEKKKADQKQETAKSASSMKSDFNADEISALLNKTD 251
Query: 149 IDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHF 208
+ +E +KS+ S + +++ + NW + + +R+K+H
Sbjct: 252 PSAGGAKRSTQEASLGAKKSNGGSKLSMSEMDALKSAIAGNWTVIPGMEGMGDVRIKVHM 311
Query: 209 QLNQKGFVLGKINVDV-VGGTELVRRMLRENARKAVIKSQAF-RLSPSTYKSWRNITLFF 266
L+Q G ++G+ V+ G E RR L A +A++KS F L Y +W + + F
Sbjct: 312 NLDQDGNIVGEPEVEAVGGDNESTRRALAGGAYRAIMKSAPFSSLPKDKYDAWSEVVVNF 371
Query: 267 VPSKM 271
PS +
Sbjct: 372 DPSDL 376
Score = 50.3 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/180 (13%), Positives = 56/180 (31%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
++ + S +LH + L + + E + VD + E + + P
Sbjct: 1 MKTSVVTSAVLHCLVLTWAMVSLGAPESFKVEDFEAMPVDLVPVESITQMQQGDKKAPKK 60
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
+ EN + KT N ++ + + + PV
Sbjct: 61 ETSAPVPTTRPPIAEPAENAGDNNIDLKTPPVPNAKPSNTEAAAANSSDKPLPKTDPVPN 120
Query: 123 YDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIV 182
K + + T EQ + S K ++ +P++K + + + ++ V
Sbjct: 121 DVKDIVKEETEVEQPKEVASIPPPKPVEVTPPKPEEKAPEEQAKPEEPPKPEAEALPDNV 180
>gi|312115992|ref|YP_004013588.1| TolA [Rhodomicrobium vannielii ATCC 17100]
gi|311221121|gb|ADP72489.1| putative TolA [Rhodomicrobium vannielii ATCC 17100]
Length = 348
Score = 99.2 bits (245), Expect = 5e-19, Method: Composition-based stats.
Identities = 47/346 (13%), Positives = 108/346 (31%), Gaps = 78/346 (22%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
+ GL S+I H++ L+ FNF + +SV+ + +D+ + K++
Sbjct: 1 MRYGLIGSVIFHLLVFGLVIFNFASSGEKDVPPPPPISVEIMSPKDFSERQQGKVDAKAQ 60
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTK-------------------THATENETKRSSS 103
++ + + K E ++
Sbjct: 61 TSAPLAELKAPEAPATAKKEVEQKPSPKVTEKEALAPPPPKAEPTPAPQPKPVEQAKAQP 120
Query: 104 SK---------------------------GEQALKESALLRMPVSPYDKQKISKATNKEQ 136
+ + + A + P +D I+ K+Q
Sbjct: 121 APAPEKPVEKPKPVVKKEPPPKPKAEVAAKSEDRPKPAAEKQPERNFDPSHIASLIKKDQ 180
Query: 137 DLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAI----------------- 179
+ S + ++DT + + + + PS +
Sbjct: 181 PAETRSQTSRSTMDTQPAKTYSDRQTAVLNRDPNAGAPSGNYEPGRPWRPASSLQDQAMG 240
Query: 180 --------------AIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVV 225
+V++R+ NW++P + V++H +LN+ G ++ V +
Sbjct: 241 VPQAHGAMNAGSCADLVQSRIEQNWDLPLGAALGEMGLVRLHIELNRDGTLIRPPMV-MD 299
Query: 226 GGTELVRRMLRENARKAVIKSQAFRLSPSTYKSWRNITLFFVPSKM 271
T + + + A +A ++ + + P+ Y R++ L F P M
Sbjct: 300 APTSPTGQAMADAAIRAAMRGAPYSIPPAQYDRCRDMVLRFNPRDM 345
>gi|90426223|ref|YP_534593.1| putative TolA [Rhodopseudomonas palustris BisB18]
gi|90108237|gb|ABD90274.1| putative TolA [Rhodopseudomonas palustris BisB18]
Length = 314
Score = 99.2 bits (245), Expect = 6e-19, Method: Composition-based stats.
Identities = 47/313 (15%), Positives = 96/313 (30%), Gaps = 44/313 (14%)
Query: 1 MRLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKI--- 57
M+++ L S+ LHV+ + +F+ + L E + VD I ++
Sbjct: 1 MKVDKTLLASVALHVLVIGYGLVSFSARSLE-APPPESMPVDIISSDQLSQITAGSKTGA 59
Query: 58 -------------EEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSS 104
+PV G E + +V + + K +
Sbjct: 60 KDKPKPLVEKIADAKPVDDPVGKISEKPPIETAVAPTPPPKPAEKPVEKKPDPPKPVAEE 119
Query: 105 KGEQALKESALLRMPVSPYDKQKISKATN-------------------------KEQDLQ 139
K + K P P + K +Q
Sbjct: 120 KPKAEPKPIEKKPDPPKPDSIAEALKKDESKKPPPKPEAKAAPAPPPKPKQERTFDQSKI 179
Query: 140 GISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRF 199
++ S SQ + +R R+ WN+ + +R
Sbjct: 180 AALLDKRDPTRQAATGAALNSQASLGSSRGTAATLSQSELDALRARLTQLWNVQAGTERP 239
Query: 200 KKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLS-PSTYKS 258
++L V + +L + + + V G+ + + A +AV++ Q + + TY
Sbjct: 240 EELIVDIRIRLTPERRLAAPPEI-VSRGSSPRYQAAADAAMRAVLQGQPYDMLQAGTYDQ 298
Query: 259 WRNITLFFVPSKM 271
W+++ + F P +M
Sbjct: 299 WKDMIVTFDPRQM 311
>gi|306841417|ref|ZP_07474119.1| tolA protein [Brucella sp. BO2]
gi|306288523|gb|EFM59875.1| tolA protein [Brucella sp. BO2]
Length = 291
Score = 98.8 bits (244), Expect = 7e-19, Method: Composition-based stats.
Identities = 43/222 (19%), Positives = 84/222 (37%), Gaps = 2/222 (0%)
Query: 50 HSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQA 109
+++ + EP + K + + + + K A E + K + +
Sbjct: 71 PANEMQAEPEPKQEVKPDPVAEAIEKQAEAPDAEALKLPDKVPAPEAKPKPPQAQTAKTN 130
Query: 110 LKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSS 169
++ + + SK ++ + +K S D+ L K ++
Sbjct: 131 ERKQPEEKKKTQSASQTSQSKNDAIADEVAALLNKQKASGGGAKRSTDQASLGGKK--NT 188
Query: 170 RKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTE 229
SQ + +R + WN+P+ L V + +L + G + G V GG +
Sbjct: 189 GGSKLSQSEMDALRGAISKCWNVPAGVADAPGLVVTVKMKLAEDGSIQGTPEVTSGGGAD 248
Query: 230 LVRRMLRENARKAVIKSQAFRLSPSTYKSWRNITLFFVPSKM 271
V R E+AR+AV++ + L Y SW + + F PS+M
Sbjct: 249 GVARAAAESARRAVMRCAPYNLPVDKYDSWSEVIVNFDPSEM 290
>gi|148559086|ref|YP_001259550.1| tolA protein [Brucella ovis ATCC 25840]
gi|148370343|gb|ABQ60322.1| tolA protein [Brucella ovis ATCC 25840]
Length = 356
Score = 98.8 bits (244), Expect = 8e-19, Method: Composition-based stats.
Identities = 43/225 (19%), Positives = 84/225 (37%), Gaps = 2/225 (0%)
Query: 47 EDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKG 106
+++ + EP + K + + + + K A E + K +
Sbjct: 133 TPVPANEMQAEPEPKQEVKPDPVAEAIEKQAEAPDAEALKLPDKVPAPEAKPKPPQAQTA 192
Query: 107 EQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVE 166
+ ++ + + SK ++ + +K S D+ L K
Sbjct: 193 KTNERKQPEEKKKTQSASQTSQSKNDAIADEVAALLNKQKASGGGAKRSTDQASLGGKK- 251
Query: 167 KSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVG 226
++ SQ + +R + WN+P+ L V + +L + G + G V G
Sbjct: 252 -NTGGSKLSQSEMDALRGAISKCWNVPTGVADAPGLVVTVKMKLAEDGSIQGTPEVTSGG 310
Query: 227 GTELVRRMLRENARKAVIKSQAFRLSPSTYKSWRNITLFFVPSKM 271
G + V R E+AR+AV++ + L Y SW + + F PS+M
Sbjct: 311 GADGVARAAAESARRAVMRCAPYNLPVDKYDSWSEVIVNFDPSEM 355
Score = 38.0 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 25/170 (14%), Positives = 52/170 (30%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
++ GL S++LH + + L +F+ + E VD + E + + P+
Sbjct: 1 MKAGLTSSVVLHAVAVALAVVSFSSPKAFDVQDSESFPVDIVPIESLTQIQQGDKKAPMK 60
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
+ + EN TKT + + + E + + + P
Sbjct: 61 EKSAPVPTTRPQTVPNAENFGDQEVDTKTPPKPDAKAKPIETAEEPKAQPEPVKKPEPKP 120
Query: 123 YDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKR 172
K + AE + V P + + + E +
Sbjct: 121 VPKPEPKPEEKPTPVPANEMQAEPEPKQEVKPDPVAEAIEKQAEAPDAEA 170
>gi|86748934|ref|YP_485430.1| putative TolA [Rhodopseudomonas palustris HaA2]
gi|86571962|gb|ABD06519.1| putative TolA [Rhodopseudomonas palustris HaA2]
Length = 320
Score = 98.4 bits (243), Expect = 1e-18, Method: Composition-based stats.
Identities = 35/317 (11%), Positives = 80/317 (25%), Gaps = 57/317 (17%)
Query: 7 LAISMILHVMFLLLLYFNFNVQLLV--PISRREMLSVDNIYNEDYHSSKYKKIEEPVVQF 64
+A S+ LHV+ L +F+ + P + ++ + +E
Sbjct: 1 MAASVALHVLVLGWAMLSFSSKAFELEPQDSVAVDTISEDQLAKVMAGMRSGKKENPKPL 60
Query: 65 KGSSQENLVRDFSVQENGDRFSDQTKT--HATENETKRSSSSKGEQALKESALLRMPVSP 122
E + +V + D+ + +T+ K K
Sbjct: 61 VEKVAEAKPVEDTVGKINDKKPPVVTDTSPPPQPKTEEKPVEKKPDPPKPVVKEEPKKEE 120
Query: 123 YDKQ----------------------------------------------------KISK 130
K K
Sbjct: 121 PKKAEKKPEPAKEEAKEAEKKPEPKVDPIAEALKKEEKKKPPPKPAEAAAKPPEPVKPKA 180
Query: 131 ATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANW 190
+Q ++ V + + A+ +++V W
Sbjct: 181 ERVFDQSKIAALLDKRDPTRQAVAGDALNSNAALGLSKGSAANNAATWGAMFQSQVERCW 240
Query: 191 NIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFR 250
P ++ +L + G + + R+ +E+A +A+I+ Q ++
Sbjct: 241 KKPYGGIEAQRAEAAFVIRLKRDGTLESMPQPEGH-PATPYLRVYQESALRAIIECQPYK 299
Query: 251 LSPSTYKSWRNITLFFV 267
L P+ ++ W+ F
Sbjct: 300 LPPAFFEEWKYFAPVFT 316
>gi|209965096|ref|YP_002298011.1| protein TonB, putative [Rhodospirillum centenum SW]
gi|209958562|gb|ACI99198.1| protein TonB, putative [Rhodospirillum centenum SW]
Length = 330
Score = 98.1 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 22/133 (16%), Positives = 51/133 (38%), Gaps = 3/133 (2%)
Query: 142 SFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKK 201
S +++ +P ++ + S ++ S +R ++ WN+PS + +
Sbjct: 197 SLEKEQPAPPAKEKPQERPVESGSPPAAAGERLSISEEDALRRQIGQCWNVPSGARGVES 256
Query: 202 LRVKMHFQLNQKGFVLGKINVDVVGG-TELVRRMLRENARKA--VIKSQAFRLSPSTYKS 258
++ ++ + V G + G ++ R E+A +A + L Y +
Sbjct: 257 MQAEIRVLFDANMRVTGVQFIRGNGNLSDPHFRAFVESALRAPQLPACATLNLPRDKYGN 316
Query: 259 WRNITLFFVPSKM 271
+I + F P M
Sbjct: 317 RGSIVMNFSPRDM 329
Score = 46.8 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 9/59 (15%), Positives = 21/59 (35%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPV 61
+ L +S +LHV L+ F + + + VD + ++ ++
Sbjct: 1 MRRALVLSGVLHVALFLIALFGLPALKSQDVLMLQEIPVDVVEVGPMTIARLQQDAPKP 59
>gi|332716444|ref|YP_004443910.1| putative TolA outer membrane protein [Agrobacterium sp. H13-3]
gi|325063129|gb|ADY66819.1| putative TolA outer membrane protein [Agrobacterium sp. H13-3]
Length = 389
Score = 98.1 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 37/249 (14%), Positives = 80/249 (32%), Gaps = 2/249 (0%)
Query: 24 NFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGD 83
+ + + ++ E V + +
Sbjct: 141 ALPQTKPEIAPQPKTEPPPQETKAEEPPPVQQEPAEIPVPPNVPRPNSRPEPPKPEVPKQ 200
Query: 84 RFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISF 143
+ + E + K SK ++ D
Sbjct: 201 AETKPAEQKPAEKPAETKPDQAKSTDKPSDKKPGEKKQETAKSASSKESDFNADDVAALL 260
Query: 144 AEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLR 203
++ R ++ L +K++ SQ + +R + NW I +R
Sbjct: 261 NKQAPSGGGAKRSTQQASL-GGKKTTGGSTLSQTEMDALRGAIQKNWQIIPGMADASDVR 319
Query: 204 VKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAF-RLSPSTYKSWRNI 262
V++ +L++ G ++G+ ++ GG+E RR L A +A+++S F L Y +W +
Sbjct: 320 VRVTMKLDRDGSIIGRPEIEATGGSEGTRRALSGGAYRAIMRSAPFTNLPADKYDAWNEV 379
Query: 263 TLFFVPSKM 271
+ F PS++
Sbjct: 380 VVNFDPSEL 388
Score = 51.1 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/180 (12%), Positives = 45/180 (25%), Gaps = 3/180 (1%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
++ L S I+H L + + +S+ E L V+ + E+ + P
Sbjct: 1 MKGSLTTSAIVHASLLAFALVSLGSPEPLDVSQAEALPVELVPIEELSQIQQGDKNAP-- 58
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
S + N + + A PV
Sbjct: 59 -KAEKSAPVPTTRPDIVPNAQNVGNNVADIEAPPTPTTKPNDNISAAAPPKQEKPQPVVD 117
Query: 123 YDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIV 182
++ + +E + P K E + + P Q A +
Sbjct: 118 TKANEVKEIVKEETSAPKPQEMAALPQTKPEIAPQPKTEPPPQETKAEEPPPVQQEPAEI 177
>gi|23502556|ref|NP_698683.1| tolA protein [Brucella suis 1330]
gi|161619627|ref|YP_001593514.1| TolA protein [Brucella canis ATCC 23365]
gi|163845277|ref|YP_001622932.1| hypothetical protein BSUIS_B1173 [Brucella suis ATCC 23445]
gi|254700359|ref|ZP_05162187.1| hypothetical protein Bsuib55_05814 [Brucella suis bv. 5 str. 513]
gi|254703476|ref|ZP_05165304.1| hypothetical protein Bsuib36_06042 [Brucella suis bv. 3 str. 686]
gi|256370107|ref|YP_003107618.1| tolA protein [Brucella microti CCM 4915]
gi|261750853|ref|ZP_05994562.1| TolA protein [Brucella suis bv. 5 str. 513]
gi|261754106|ref|ZP_05997815.1| TolA protein [Brucella suis bv. 3 str. 686]
gi|294850949|ref|ZP_06791625.1| hypothetical protein BAZG_03079 [Brucella sp. NVSL 07-0026]
gi|23348556|gb|AAN30598.1| tolA protein [Brucella suis 1330]
gi|161336438|gb|ABX62743.1| TolA protein [Brucella canis ATCC 23365]
gi|163676000|gb|ABY40110.1| Hypothetical protein, conserved [Brucella suis ATCC 23445]
gi|256000270|gb|ACU48669.1| tolA protein [Brucella microti CCM 4915]
gi|261740606|gb|EEY28532.1| TolA protein [Brucella suis bv. 5 str. 513]
gi|261743859|gb|EEY31785.1| TolA protein [Brucella suis bv. 3 str. 686]
gi|294821592|gb|EFG38588.1| hypothetical protein BAZG_03079 [Brucella sp. NVSL 07-0026]
Length = 356
Score = 98.1 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 43/222 (19%), Positives = 84/222 (37%), Gaps = 2/222 (0%)
Query: 50 HSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQA 109
+++ + EP + K + + + + K A E + K + +
Sbjct: 136 PANEMQAEPEPKQEVKPDPVAEAIEKQAEAPDAEALKLPDKVPAPEAKPKPPQAQTAKTN 195
Query: 110 LKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSS 169
++ + + SK ++ + +K S D+ L K ++
Sbjct: 196 ERKQPEEKKKTQSASQTSQSKNDAIADEVAALLNKQKASGGGAKRSTDQASLGGKK--NT 253
Query: 170 RKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTE 229
SQ + +R + WN+P+ L V + +L + G + G V GG +
Sbjct: 254 GGSKLSQSEMDALRGAISKCWNVPAGVADAPGLVVTVKMKLAEDGSIQGTPEVTSGGGAD 313
Query: 230 LVRRMLRENARKAVIKSQAFRLSPSTYKSWRNITLFFVPSKM 271
V R E+AR+AV++ + L Y SW + + F PS+M
Sbjct: 314 GVARAAAESARRAVMRCAPYNLPVDKYDSWSEVIVNFDPSEM 355
Score = 37.6 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 25/170 (14%), Positives = 52/170 (30%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
++ GL S++LH + + L +F+ + E VD + E + + P+
Sbjct: 1 MKAGLTSSVVLHAVAVALAVVSFSSPKAFDVQDSESFPVDIVPIESLTQIQQGDKKAPMK 60
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
+ + EN TKT + + + E + + + P
Sbjct: 61 EKSAPVPTTRPQTVPNAENFGDQEVDTKTPPKPDAKAKPIETAEEPKAQPEPVKKPEPKP 120
Query: 123 YDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKR 172
K + AE + V P + + + E +
Sbjct: 121 DPKPEPKPEEKPTPVPANEMQAEPEPKQEVKPDPVAEAIEKQAEAPDAEA 170
>gi|83312311|ref|YP_422575.1| periplasmic protein TonB, links inner and outer membranes
[Magnetospirillum magneticum AMB-1]
gi|82947152|dbj|BAE52016.1| Periplasmic protein TonB, links inner and outer membranes
[Magnetospirillum magneticum AMB-1]
Length = 313
Score = 98.1 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 34/286 (11%), Positives = 74/286 (25%), Gaps = 38/286 (13%)
Query: 22 YFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQEN 81
F + VD + + + +P + + + E + E
Sbjct: 23 VFGLPQFWREIPMEEAPIVVDIVPIGAKTNPPPLQDNKPQPEPQKAEPEPPKPEPPKPEP 82
Query: 82 GDRFSDQTKTHATENETKRSSSSKGEQALKE----------------------------- 112
+ T + + +
Sbjct: 83 PKPEPPKPPPPPTPAPPPPPTPAPPPPKPEPAPAPIPKPEPKPEPKPEPPPPPKPEPRPE 142
Query: 113 --------SALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSK 164
L + DK+K + ++ L+ + + + +
Sbjct: 143 PPKKPKDVKDELDSLLKSVDKKKPTPKDELDKLLKSTEKLKPSVPENKTATQTAPQSVRG 202
Query: 165 VEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKIN-VD 223
+ S +R + WN+P+ K KL V + + G V ++
Sbjct: 203 SASHNPNEPVSMTERDRIRAHIERFWNVPAGAKDADKLVVMIKVSVLPDGTVTAAEVELN 262
Query: 224 VVGGTELVRRMLRENARKAVIKSQAFRLSPSTYKSWRNITLFFVPS 269
V + ++AR+AV + + Y +R+ TL F P
Sbjct: 263 PVMMMNPYYQAAADSARRAVRAASPLPIPVDKYDQFRDFTLAFNPK 308
>gi|260576646|ref|ZP_05844633.1| TonB domain-containing protein [Rhodobacter sp. SW2]
gi|259021131|gb|EEW24440.1| TonB domain-containing protein [Rhodobacter sp. SW2]
Length = 385
Score = 97.7 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 33/247 (13%), Positives = 68/247 (27%), Gaps = 5/247 (2%)
Query: 25 FNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDR 84
+ P R P V + + + +V + +
Sbjct: 134 VPPSSVKPKPRPSTRVAPVPVEPPPPDVAVAPEATPAVTPEPAPEAPVVVEEQPAAAPEE 193
Query: 85 FSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFA 144
+ Q T AT+ + A + ++ T E +
Sbjct: 194 ATTQIVTEATDTSDDAPQLAPTASARPRVRP-SRSAPAPVAEAVAAETPAEPAADSTATD 252
Query: 145 EKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRV 204
+ + + S +R V WN+ + + V
Sbjct: 253 DAVAEALAAELAVADSGEQGGNTAPAGPPMSSGEKDALRVAVERCWNVAALSTEALRTTV 312
Query: 205 KMHFQLNQKGFVL--GKINVDVVGGTELVRRMLRENARKAVIKSQA--FRLSPSTYKSWR 260
+ + G + GG++ R E AR+A+++ + F L P Y +W+
Sbjct: 313 TVAVSVGPDGTPEAASVRMIGSSGGSDAAARQAYEVARRAILRCGSEGFPLPPEKYDTWK 372
Query: 261 NITLFFV 267
++ L F
Sbjct: 373 DLELVFN 379
Score = 38.0 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 16/176 (9%), Positives = 43/176 (24%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
++ G+ IS I H +L + F + +V + ++ + P
Sbjct: 1 MDKGVIISGIGHGCLILWVLFAGFFSTPEDAPEAAVTAVSLLSAAEFDALVAAAPSTPEP 60
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
++ D + E ++ + + + + +P
Sbjct: 61 APTPAAPAEPAVAAPEPVVPDVAPEPAPEPEPAPEAVAAADPEPQPTPEPAPDPTPAPAP 120
Query: 123 YDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDA 178
+ + S V + V + + + A
Sbjct: 121 EPLPPADVPQPIPVPPSSVKPKPRPSTRVAPVPVEPPPPDVAVAPEATPAVTPEPA 176
>gi|254708712|ref|ZP_05170523.1| hypothetical protein BpinB_00336 [Brucella pinnipedialis B2/94]
gi|254714559|ref|ZP_05176370.1| hypothetical protein BcetM6_14712 [Brucella ceti M644/93/1]
gi|254717456|ref|ZP_05179267.1| hypothetical protein BcetM_13836 [Brucella ceti M13/05/1]
gi|256030238|ref|ZP_05443852.1| hypothetical protein BpinM2_06256 [Brucella pinnipedialis
M292/94/1]
gi|261219287|ref|ZP_05933568.1| TolA protein [Brucella ceti M13/05/1]
gi|261316203|ref|ZP_05955400.1| TolA protein [Brucella pinnipedialis B2/94]
gi|261322348|ref|ZP_05961545.1| TolA protein [Brucella ceti M644/93/1]
gi|265987266|ref|ZP_06099823.1| TolA protein [Brucella pinnipedialis M292/94/1]
gi|260924376|gb|EEX90944.1| TolA protein [Brucella ceti M13/05/1]
gi|261295038|gb|EEX98534.1| TolA protein [Brucella ceti M644/93/1]
gi|261295426|gb|EEX98922.1| TolA protein [Brucella pinnipedialis B2/94]
gi|264659463|gb|EEZ29724.1| TolA protein [Brucella pinnipedialis M292/94/1]
Length = 356
Score = 97.7 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 43/222 (19%), Positives = 84/222 (37%), Gaps = 2/222 (0%)
Query: 50 HSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQA 109
+++ + EP + K + + + + K A E + K + +
Sbjct: 136 PANEMQAEPEPKQEVKPDPVAEAIEKQAEAPDAEALKLPDKVPAPEAKPKPPQAQTAKTN 195
Query: 110 LKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSS 169
++ + + SK ++ + +K S D+ L K ++
Sbjct: 196 ERKQLEEKKKTQSASQTSQSKNDAIADEVAALLNKQKASGGGAKRSTDQASLGGKK--NT 253
Query: 170 RKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTE 229
SQ + +R + WN+P+ L V + +L + G + G V GG +
Sbjct: 254 GGSKLSQSEMDALRGAISKCWNVPAGVADAPGLVVTVKMKLAEDGSIQGTPEVTSGGGAD 313
Query: 230 LVRRMLRENARKAVIKSQAFRLSPSTYKSWRNITLFFVPSKM 271
V R E+AR+AV++ + L Y SW + + F PS+M
Sbjct: 314 GVARAAAESARRAVMRCAPYNLPVDKYDSWSEVIVNFDPSEM 355
Score = 38.0 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 25/170 (14%), Positives = 52/170 (30%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
++ GL S++LH + + L +F+ + E VD + E + + P+
Sbjct: 1 MKAGLTSSVVLHAVAVALAVVSFSSPKAFDVQDSESFPVDIVPIESLTQIQQGDKKAPMK 60
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
+ + EN TKT + + + E + + + P
Sbjct: 61 EKSAPVPTTRPQTVPNAENFGDQEVDTKTPPKPDAKAKPIETAEEPKAQPEPVKKPEPKP 120
Query: 123 YDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKR 172
K + AE + V P + + + E +
Sbjct: 121 DPKPEPKPEEKPTPVPANEMQAEPEPKQEVKPDPVAEAIEKQAEAPDAEA 170
>gi|254719701|ref|ZP_05181512.1| hypothetical protein Bru83_09188 [Brucella sp. 83/13]
gi|265984715|ref|ZP_06097450.1| TolA protein [Brucella sp. 83/13]
gi|264663307|gb|EEZ33568.1| TolA protein [Brucella sp. 83/13]
Length = 356
Score = 97.7 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 43/222 (19%), Positives = 84/222 (37%), Gaps = 2/222 (0%)
Query: 50 HSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQA 109
+++ + EP + K + + + + K A E + K + +
Sbjct: 136 PANEMQAEPEPKQEVKPDPVAEAIEKQAEAPDAEALKLPDKVPAPEAKPKPPQAQTAKTN 195
Query: 110 LKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSS 169
++ + + SK ++ + +K S D+ L K ++
Sbjct: 196 ERKQPEEKKKTQSASQTSQSKNDAIADEVAALLNKQKASGGGAKRSTDQASLGGKK--NT 253
Query: 170 RKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTE 229
SQ + +R + WN+P+ L V + +L + G + G V GG +
Sbjct: 254 GGSKLSQSEMDALRGAISKCWNVPAGVADAPGLVVTVKMKLAEDGSIQGTPEVTSGGGAD 313
Query: 230 LVRRMLRENARKAVIKSQAFRLSPSTYKSWRNITLFFVPSKM 271
V R E+AR+AV++ + L Y SW + + F PS+M
Sbjct: 314 GVARAAAESARRAVMRCAPYNLPVDKYDSWSEVIVNFDPSEM 355
Score = 37.6 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 25/170 (14%), Positives = 52/170 (30%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
++ GL S++LH + + L +F+ + E VD + E + + P+
Sbjct: 1 MKAGLTSSVVLHAVAVALAVVSFSSPKAFDVQDSESFPVDIVPIESLTQIQQGDKKAPMK 60
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
+ + EN TKT + + + E + + + P
Sbjct: 61 EKSAPVPTTRPQTVPNAENFGDQEVDTKTPPKPDAKAKPIEAAEEPKAQPEPVKKPEPKP 120
Query: 123 YDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKR 172
K + AE + V P + + + E +
Sbjct: 121 DPKPEPKPEEKPTPVPANEMQAEPEPKQEVKPDPVAEAIEKQAEAPDAEA 170
>gi|62290570|ref|YP_222363.1| TolA protein [Brucella abortus bv. 1 str. 9-941]
gi|82700486|ref|YP_415060.1| hypothetical protein BAB1_1710 [Brucella melitensis biovar Abortus
2308]
gi|237816075|ref|ZP_04595071.1| Protein TsetseEP precursor [Brucella abortus str. 2308 A]
gi|254689866|ref|ZP_05153120.1| hypothetical protein Babob68_06802 [Brucella abortus bv. 6 str.
870]
gi|254694359|ref|ZP_05156187.1| hypothetical protein Babob3T_06812 [Brucella abortus bv. 3 str.
Tulya]
gi|254698017|ref|ZP_05159845.1| hypothetical protein Babob28_09998 [Brucella abortus bv. 2 str.
86/8/59]
gi|254730901|ref|ZP_05189479.1| hypothetical protein Babob42_06837 [Brucella abortus bv. 4 str.
292]
gi|256258120|ref|ZP_05463656.1| hypothetical protein Babob9C_12404 [Brucella abortus bv. 9 str.
C68]
gi|260547186|ref|ZP_05822924.1| TolA protein [Brucella abortus NCTC 8038]
gi|260755397|ref|ZP_05867745.1| TolA protein [Brucella abortus bv. 6 str. 870]
gi|260758619|ref|ZP_05870967.1| TolA protein [Brucella abortus bv. 4 str. 292]
gi|260762451|ref|ZP_05874788.1| TolA protein [Brucella abortus bv. 2 str. 86/8/59]
gi|260884413|ref|ZP_05896027.1| TolA protein [Brucella abortus bv. 9 str. C68]
gi|261214668|ref|ZP_05928949.1| TolA protein [Brucella abortus bv. 3 str. Tulya]
gi|297248969|ref|ZP_06932677.1| hypothetical protein BAYG_03010 [Brucella abortus bv. 5 str. B3196]
gi|62196702|gb|AAX75002.1| TolA, tolA protein [Brucella abortus bv. 1 str. 9-941]
gi|82616587|emb|CAJ11666.1| Proline-rich region:Proline-rich extensin:Histamine H3 receptor
[Brucella melitensis biovar Abortus 2308]
gi|237788738|gb|EEP62950.1| Protein TsetseEP precursor [Brucella abortus str. 2308 A]
gi|260095551|gb|EEW79429.1| TolA protein [Brucella abortus NCTC 8038]
gi|260668937|gb|EEX55877.1| TolA protein [Brucella abortus bv. 4 str. 292]
gi|260672877|gb|EEX59698.1| TolA protein [Brucella abortus bv. 2 str. 86/8/59]
gi|260675505|gb|EEX62326.1| TolA protein [Brucella abortus bv. 6 str. 870]
gi|260873941|gb|EEX81010.1| TolA protein [Brucella abortus bv. 9 str. C68]
gi|260916275|gb|EEX83136.1| TolA protein [Brucella abortus bv. 3 str. Tulya]
gi|297174102|gb|EFH33459.1| hypothetical protein BAYG_03010 [Brucella abortus bv. 5 str. B3196]
Length = 356
Score = 97.7 bits (241), Expect = 2e-18, Method: Composition-based stats.
Identities = 42/222 (18%), Positives = 84/222 (37%), Gaps = 2/222 (0%)
Query: 50 HSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQA 109
+++ + EP + K + + + + + A E + K + +
Sbjct: 136 PANEMQAEPEPKQEVKPDPVAEAIEKQAEAPDAEALKLPDRVPAPEAKPKPPQAQTAKTN 195
Query: 110 LKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSS 169
++ + + SK ++ + +K S D+ L K ++
Sbjct: 196 ERKQPEEKKKTQSASQTSQSKNDAIADEVAALLNKQKASGGGAKRSTDQASLGGKK--NT 253
Query: 170 RKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTE 229
SQ + +R + WN+P+ L V + +L + G + G V GG +
Sbjct: 254 GGSKLSQSEMDALRGAISKCWNVPAGVADAPGLVVTVKMKLAEDGSIQGTPEVTSGGGAD 313
Query: 230 LVRRMLRENARKAVIKSQAFRLSPSTYKSWRNITLFFVPSKM 271
V R E+AR+AV++ + L Y SW + + F PS+M
Sbjct: 314 GVARAAAESARRAVMRCAPYNLPVDKYDSWSEVIVNFDPSEM 355
Score = 37.6 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 25/170 (14%), Positives = 52/170 (30%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
++ GL S++LH + + L +F+ + E VD + E + + P+
Sbjct: 1 MKAGLTSSVVLHAVAVALAVVSFSSPKAFDVQDSESFPVDIVPIESLTQIQQGDKKAPMK 60
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
+ + EN TKT + + + E + + + P
Sbjct: 61 EKSAPVPTTRPQTVPNAENFGDQEVDTKTPPKPDAKAKPIETAEEPKAQPEPVKKPEPKP 120
Query: 123 YDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKR 172
K + AE + V P + + + E +
Sbjct: 121 DPKPEPKPEEKPTPVPANEMQAEPEPKQEVKPDPVAEAIEKQAEAPDAEA 170
>gi|225853153|ref|YP_002733386.1| hypothetical protein BMEA_A1750 [Brucella melitensis ATCC 23457]
gi|256045308|ref|ZP_05448202.1| hypothetical protein Bmelb1R_12512 [Brucella melitensis bv. 1 str.
Rev.1]
gi|256114266|ref|ZP_05455011.1| hypothetical protein Bmelb3E_15733 [Brucella melitensis bv. 3 str.
Ether]
gi|256263355|ref|ZP_05465887.1| TolA protein [Brucella melitensis bv. 2 str. 63/9]
gi|260565801|ref|ZP_05836284.1| TolA protein [Brucella melitensis bv. 1 str. 16M]
gi|265991733|ref|ZP_06104290.1| TolA protein [Brucella melitensis bv. 1 str. Rev.1]
gi|265995570|ref|ZP_06108127.1| TolA protein [Brucella melitensis bv. 3 str. Ether]
gi|13898975|gb|AAK48917.1|AF358662_4 TolA protein [Brucella melitensis]
gi|225641518|gb|ACO01432.1| Protein TsetseEP precursor [Brucella melitensis ATCC 23457]
gi|260151174|gb|EEW86269.1| TolA protein [Brucella melitensis bv. 1 str. 16M]
gi|262766854|gb|EEZ12472.1| TolA protein [Brucella melitensis bv. 3 str. Ether]
gi|263002689|gb|EEZ15092.1| TolA protein [Brucella melitensis bv. 1 str. Rev.1]
gi|263093354|gb|EEZ17423.1| TolA protein [Brucella melitensis bv. 2 str. 63/9]
gi|326409711|gb|ADZ66776.1| TolA, tolA protein [Brucella melitensis M28]
gi|326539418|gb|ADZ87633.1| protein TsetseEP precursor [Brucella melitensis M5-90]
Length = 356
Score = 97.3 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 41/222 (18%), Positives = 84/222 (37%), Gaps = 2/222 (0%)
Query: 50 HSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQA 109
+++ + EP + K + + + + + A + + K + +
Sbjct: 136 PANEMQAEPEPKQEVKPDPVAEAIEKQAEAPDAEALKLPDRVPAPKAKPKPPQAQTAKTN 195
Query: 110 LKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSS 169
++ + + SK ++ + +K S D+ L K ++
Sbjct: 196 ERKQPEEKKKTQSASQTSQSKNDAIADEVAALLNKQKASGGGAKRSTDQASLGGKK--NT 253
Query: 170 RKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTE 229
SQ + +R + WN+P+ L V + +L + G + G V GG +
Sbjct: 254 GGSKLSQSEMDALRGAISKCWNVPAGVADAPGLVVTVKMKLAEDGSIQGTPEVTSGGGAD 313
Query: 230 LVRRMLRENARKAVIKSQAFRLSPSTYKSWRNITLFFVPSKM 271
V R E+AR+AV++ + L Y SW + + F PS+M
Sbjct: 314 GVARAAAESARRAVMRCAPYNLPVDKYDSWSEVIVNFDPSEM 355
Score = 38.0 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 25/170 (14%), Positives = 52/170 (30%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
++ GL S++LH + + L +F+ + E VD + E + + P+
Sbjct: 1 MKAGLTSSVVLHAVAVALAVVSFSSPKAFDVQDSESFPVDIVPIESLTQIQQGDKKAPMK 60
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
+ + EN TKT + + + E + + + P
Sbjct: 61 EKSAPVPTTRPQTVPNAENFGDQEVDTKTPPKPDAKAKPIETAEEPKAQPEPVKKPEPKP 120
Query: 123 YDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKR 172
K + AE + V P + + + E +
Sbjct: 121 DPKPEPKPEEKPTPVPANEMQAEPEPKQEVKPDPVAEAIEKQAEAPDAEA 170
>gi|225628266|ref|ZP_03786300.1| Protein TsetseEP precursor [Brucella ceti str. Cudo]
gi|256160413|ref|ZP_05458102.1| hypothetical protein BcetM4_15504 [Brucella ceti M490/95/1]
gi|256255619|ref|ZP_05461155.1| hypothetical protein BcetB_15323 [Brucella ceti B1/94]
gi|260167913|ref|ZP_05754724.1| tolA protein [Brucella sp. F5/99]
gi|261222822|ref|ZP_05937103.1| TolA protein [Brucella ceti B1/94]
gi|261757351|ref|ZP_06001060.1| TolA protein [Brucella sp. F5/99]
gi|265998781|ref|ZP_06111338.1| TolA protein [Brucella ceti M490/95/1]
gi|225616112|gb|EEH13160.1| Protein TsetseEP precursor [Brucella ceti str. Cudo]
gi|260921406|gb|EEX88059.1| TolA protein [Brucella ceti B1/94]
gi|261737335|gb|EEY25331.1| TolA protein [Brucella sp. F5/99]
gi|262553470|gb|EEZ09239.1| TolA protein [Brucella ceti M490/95/1]
Length = 356
Score = 97.3 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 43/222 (19%), Positives = 84/222 (37%), Gaps = 2/222 (0%)
Query: 50 HSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQA 109
+++ + EP + K + + + + K A E + K + +
Sbjct: 136 PANEMQAEPEPKQEVKPDPVAEAIEKQAEAPDAEALKLPDKVPAPEAKPKPPQAQTAKTN 195
Query: 110 LKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSS 169
++ + + SK ++ + +K S D+ L K ++
Sbjct: 196 ERKQLEEKKKTQSASQTSQSKNDAIADEVAALLNKQKASGGGAKRSTDQASLGGKK--NT 253
Query: 170 RKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTE 229
SQ + +R + WN+P+ L V + +L + G + G V GG +
Sbjct: 254 GGSKLSQSEMDALRGAISKCWNVPAGVADAPGLVVTVKMKLAEDGSIQGTPEVTSGGGAD 313
Query: 230 LVRRMLRENARKAVIKSQAFRLSPSTYKSWRNITLFFVPSKM 271
V R E+AR+AV++ + L Y SW + + F PS+M
Sbjct: 314 GVARAAAESARRAVMRCAPYNLPVDKYNSWSEVIVNFDPSEM 355
Score = 38.0 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 25/170 (14%), Positives = 52/170 (30%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
++ GL S++LH + + L +F+ + E VD + E + + P+
Sbjct: 1 MKAGLTSSVVLHAVAVALAVVSFSSPKAFDVQDSESFPVDIVPIESLTQIQQGDKKAPMK 60
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
+ + EN TKT + + + E + + + P
Sbjct: 61 EKSAPVPTTRPQTVPNAENFGDQEVDTKTPPKPDAKAKPIETAEEPKAQPEPVKKPEPKP 120
Query: 123 YDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKR 172
K + AE + V P + + + E +
Sbjct: 121 DPKPEPKPEEKPTPVPANEMQAEPEPKQEVKPDPVAEAIEKQAEAPDAEA 170
>gi|163796373|ref|ZP_02190334.1| Holliday junction DNA helicase B [alpha proteobacterium BAL199]
gi|159178515|gb|EDP63057.1| Holliday junction DNA helicase B [alpha proteobacterium BAL199]
Length = 409
Score = 97.3 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 34/250 (13%), Positives = 80/250 (32%), Gaps = 3/250 (1%)
Query: 25 FNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDR 84
+ ++ + K + E + + + + +
Sbjct: 158 LPKPQEPKQPEPQPDAIPLPKPKPPEVKKPEPEPEAPKPQEAAKPQPPKAEPAKPAAEAV 217
Query: 85 FSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFA 144
++ ++ + + EQ P K N + +Q + +
Sbjct: 218 TAEDAAPAPPLPVSRPTPPKRPEQQQAAKPTPPSPEKDKKPDKTDDFLNVLKTVQKMKDS 277
Query: 145 EKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRV 204
T P ++ ++ R S + +R ++ W +P+ K+ + L V
Sbjct: 278 ASNPTQTTQNAPKTQDSTAQRSNFDSDRPLSVSEMDAIRQQIARCWLVPAGAKQGESLLV 337
Query: 205 KMHFQLNQKGFVLGKINVDVVGG-TELVRRMLRENARKAVIK--SQAFRLSPSTYKSWRN 261
++ ++N V +D T+ R E+A +A+ L P Y++W++
Sbjct: 338 EIRVRMNADRTVRDAEIIDSNRMRTDPFFRAAAESALRALRNPSCTPLNLPPEKYETWKS 397
Query: 262 ITLFFVPSKM 271
T+ F P M
Sbjct: 398 FTITFDPKDM 407
Score = 47.2 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 21/173 (12%), Positives = 48/173 (27%), Gaps = 9/173 (5%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
+ G+ +S++ HV +LL + ++ VD + ++ + P
Sbjct: 1 MTRGVTLSVVFHVALILLAIIGLPELVRPRPIEDRLVVVDVVTIGAVTNAPPPVADAPKP 60
Query: 63 QFKGSSQE---------NLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKES 113
S + S + + A + E + K + A S
Sbjct: 61 DAPTPSTKAKPDAPKTPPPPPANSATPPPAPKIEPPRVEAPKVEVPKVEPPKPQTARNSS 120
Query: 114 ALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVE 166
P K A + + + A+ + + + K+
Sbjct: 121 PPAEPPKVEPAPAKTPSAAERVPAPKPEAVAKAEPLPLPKPQEPKQPEPQPDA 173
>gi|84516653|ref|ZP_01004012.1| tonB domain protein, putative [Loktanella vestfoldensis SKA53]
gi|84509689|gb|EAQ06147.1| tonB domain protein, putative [Loktanella vestfoldensis SKA53]
Length = 381
Score = 96.9 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 39/243 (16%), Positives = 72/243 (29%), Gaps = 6/243 (2%)
Query: 31 VPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTK 90
P + I + + + E + +V E +QT
Sbjct: 140 PPSDDPTQAPANRIASTPTAPPPPDAQISDIAREAVVPDETATAEVAVPEQQATAPEQT- 198
Query: 91 THATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSID 150
ATE + +P ++ + D + D
Sbjct: 199 --ATEIVIADERPRGAVETSIRPIARPARPAPPAPEQETATAEPTPDPAPTPAPVPDTSD 256
Query: 151 TVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQL 210
V S + R V + WN+ ++ V++ F L
Sbjct: 257 AVADALAAAVASSAAPAVQAGPPMTGSERDSFRIAVNSCWNVDPGSVAA-RVIVEVGFTL 315
Query: 211 NQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQA--FRLSPSTYKSWRNITLFFVP 268
N+ G + G+ + G + E AR+A+++ Q ++L Y WR + + F P
Sbjct: 316 NRDGTLDGEPRLLSSDGDQSATSTAFEAARRAILRCQRGGYQLPADKYDQWREVVITFDP 375
Query: 269 SKM 271
S M
Sbjct: 376 SGM 378
>gi|260568783|ref|ZP_05839251.1| TolA protein [Brucella suis bv. 4 str. 40]
gi|260154167|gb|EEW89249.1| TolA protein [Brucella suis bv. 4 str. 40]
Length = 356
Score = 96.9 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 43/222 (19%), Positives = 84/222 (37%), Gaps = 2/222 (0%)
Query: 50 HSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQA 109
+++ + EP + K + + + + K A E + K + +
Sbjct: 136 PANEMQAEPEPKQEVKPDPVAEAIEKQAEAPDAEALKLPDKVPAPEAKPKPPQAQTAKTN 195
Query: 110 LKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSS 169
++ + + SK ++ + +K S D+ L K ++
Sbjct: 196 ERKQPEEKKKTQSASQTSQSKNDAIADEVAALLNKQKASGGGAKRSTDQASLGGKK--NT 253
Query: 170 RKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTE 229
SQ + +R + WN+P+ L V + +L + G + G V GG +
Sbjct: 254 GDSKLSQSEMDALRGAISKCWNVPAGVADAPGLVVTVKMKLAEDGSIQGTPEVTSGGGAD 313
Query: 230 LVRRMLRENARKAVIKSQAFRLSPSTYKSWRNITLFFVPSKM 271
V R E+AR+AV++ + L Y SW + + F PS+M
Sbjct: 314 GVARAAAESARRAVMRCAPYNLPVDKYDSWSEVIVNFDPSEM 355
Score = 37.2 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 25/170 (14%), Positives = 52/170 (30%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
++ GL S++LH + + L +F+ + E VD + E + + P+
Sbjct: 1 MKAGLTSSVVLHAVAVALAVVSFSSPKAFDVQDSESFPVDIVPIESLTQIQQGDKKAPMK 60
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
+ + EN TKT + + + E + + + P
Sbjct: 61 EKSAPVPTTRPQTVPNAENFGDQEVDTKTPPKPDAKAKPIETAEEPKAQPEPVKKPEPKP 120
Query: 123 YDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKR 172
K + AE + V P + + + E +
Sbjct: 121 DPKPEPKPEEKPTPVPANEMQAEPEPKQEVKPDPVAEAIEKQAEAPDAEA 170
>gi|189024788|ref|YP_001935556.1| Proline-rich extensin [Brucella abortus S19]
gi|189020360|gb|ACD73082.1| Proline-rich extensin [Brucella abortus S19]
Length = 298
Score = 96.9 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 42/222 (18%), Positives = 84/222 (37%), Gaps = 2/222 (0%)
Query: 50 HSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQA 109
+++ + EP + K + + + + + A E + K + +
Sbjct: 78 PANEMQAEPEPKQEVKPDPVAEAIEKQAEAPDAEALKLPDRVPAPEAKPKPPQAQTAKTN 137
Query: 110 LKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSS 169
++ + + SK ++ + +K S D+ L K ++
Sbjct: 138 ERKQPEEKKKTQSASQTSQSKNDAIADEVAALLNKQKASGGGAKRSTDQASLGGKK--NT 195
Query: 170 RKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTE 229
SQ + +R + WN+P+ L V + +L + G + G V GG +
Sbjct: 196 GGSKLSQSEMDALRGAISKCWNVPAGVADAPGLVVTVKMKLAEDGSIQGTPEVTSGGGAD 255
Query: 230 LVRRMLRENARKAVIKSQAFRLSPSTYKSWRNITLFFVPSKM 271
V R E+AR+AV++ + L Y SW + + F PS+M
Sbjct: 256 GVARAAAESARRAVMRCAPYNLPVDKYDSWSEVIVNFDPSEM 297
>gi|306837840|ref|ZP_07470702.1| tolA protein [Brucella sp. NF 2653]
gi|306407079|gb|EFM63296.1| tolA protein [Brucella sp. NF 2653]
Length = 298
Score = 96.9 bits (239), Expect = 3e-18, Method: Composition-based stats.
Identities = 43/222 (19%), Positives = 84/222 (37%), Gaps = 2/222 (0%)
Query: 50 HSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQA 109
+++ + EP + K + + + + K A E + K + +
Sbjct: 78 PANEMQAEPEPKQEVKPDPVAEAIEKQAEAPDAEALKLPDKVPAPEAKPKPPQAQTAKTN 137
Query: 110 LKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSS 169
++ + + SK ++ + +K S D+ L K ++
Sbjct: 138 ERKQPEEKKKTQSASQTSQSKNDAIADEVAALLNKQKASGGGAKRSTDQASLGGKK--NT 195
Query: 170 RKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTE 229
SQ + +R + WN+P+ L V + +L + G + G V GG +
Sbjct: 196 GGSKLSQSEMDALRGAISKCWNVPAGVADAPGLVVTVKMKLAEDGSIQGTPEVTSGGGAD 255
Query: 230 LVRRMLRENARKAVIKSQAFRLSPSTYKSWRNITLFFVPSKM 271
V R E+AR+AV++ + L Y SW + + F PS+M
Sbjct: 256 GVARAAAESARRAVMRCAPYNLPVDKYDSWSEVIVNFDPSEM 297
>gi|116253710|ref|YP_769548.1| TolA outer membrane protein [Rhizobium leguminosarum bv. viciae
3841]
gi|115258358|emb|CAK09461.1| putative TolA outer membrane protein [Rhizobium leguminosarum bv.
viciae 3841]
Length = 379
Score = 96.9 bits (239), Expect = 3e-18, Method: Composition-based stats.
Identities = 45/266 (16%), Positives = 88/266 (33%), Gaps = 19/266 (7%)
Query: 25 FNVQLLVPISRREML----SVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQE 80
P +E++ V+ P + ++E + +
Sbjct: 112 LPKTDPKPNDVKEIVKEETEVEQPKEVASIPPPKPVEVTPPKPEEKPTEEQAKPEEPPKP 171
Query: 81 NGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQG 140
+ + D T + + K K + E + + K +E
Sbjct: 172 DAEALPDNVPTPVAKPQVKPPEPQKPAEKPPEKTPEQPKTADVPTDKKKADKKQETAKSA 231
Query: 141 ISFAEKKSIDTVV------------VRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIA 188
S + D + + +E +KS+ SQ VR +
Sbjct: 232 SSMKSDFNADEISILLNKTDPSAGGAKRSTQEASLGAKKSNGGSKLSQSEEDAVRGLIEG 291
Query: 189 NWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVD--VVGGTELVRRMLRENARKAVIKS 246
NW + + + +K+H +L++ G ++G+ V+ ++ RR L A +AV+KS
Sbjct: 292 NWLVTPGMEGLSGMVIKVHMKLDKDGNIIGQPEVESSGGSSSDATRRALEGGAYRAVMKS 351
Query: 247 QAFRL-SPSTYKSWRNITLFFVPSKM 271
F + Y++W L F PS M
Sbjct: 352 APFSMLPKDKYEAWNEFDLNFDPSSM 377
Score = 51.4 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/180 (13%), Positives = 56/180 (31%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
++ + S +LH + L + + E + VD + E + + P
Sbjct: 1 MKASVITSAVLHGLVLTWAMVSLGAPESFKVEDFEAMPVDLVPVESITQMQQGDKKAPKK 60
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
+ EN + KT N +S + + + P
Sbjct: 61 ETSAPVPTTRPPIAQPAENAGDNNVDLKTPPVPNAKPSNSEAAAANSSDKPLPKTDPKPN 120
Query: 123 YDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIV 182
K+ + + T EQ + S K ++ +P++K + + + ++ V
Sbjct: 121 DVKEIVKEETEVEQPKEVASIPPPKPVEVTPPKPEEKPTEEQAKPEEPPKPDAEALPDNV 180
>gi|39934194|ref|NP_946470.1| putative TolA [Rhodopseudomonas palustris CGA009]
gi|192289720|ref|YP_001990325.1| protein TolA [Rhodopseudomonas palustris TIE-1]
gi|39648042|emb|CAE26562.1| putative TolA [Rhodopseudomonas palustris CGA009]
gi|192283469|gb|ACE99849.1| protein TolA [Rhodopseudomonas palustris TIE-1]
Length = 327
Score = 96.9 bits (239), Expect = 3e-18, Method: Composition-based stats.
Identities = 37/325 (11%), Positives = 89/325 (27%), Gaps = 60/325 (18%)
Query: 1 MRLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHS----SKYKK 56
M+++ A S+ LH + L +F + + ++ ++VD I + + K
Sbjct: 1 MKIDKTWAASVALHALVLGWAMLSFTSKAFE-LEPQDSVAVDTISEDQLAKVMAGMRTGK 59
Query: 57 IEEPVVQFKGSSQENLV-------RDFSV------------------------------- 78
E P + ++ V + +
Sbjct: 60 KENPKPLVEKVAEAKPVDDTVGKISEKAPVVTDTSPPPQPKPKPEEKPVEKKPDPPKPVV 119
Query: 79 ----------------QENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
+ + + K + + + K E+ P
Sbjct: 120 KEEPKKEEPKKAEKKPEPAKEEAKEAEKKPEPKVDPIAEALKKEEKKKPPPKPTETAAKP 179
Query: 123 YDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIV 182
++ K +Q ++ V + + S A+
Sbjct: 180 PEQTKPKPERVFDQSKIAALLDKRDPTRNAVAGDVLNSNAALGLSKGKSADNSATWGAMF 239
Query: 183 RNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKA 242
+++V W P ++ +L + G + + R+ +E+A +A
Sbjct: 240 QSQVERCWKKPYGGIEAQRAEASFVIRLKRDGTLETLPQPEGH-PATPYLRVYQESALRA 298
Query: 243 VIKSQAFRLSPSTYKSWRNITLFFV 267
+I+ Q + L + W+ F
Sbjct: 299 IIECQPYNLPAQFFDEWKFFAPVFT 323
>gi|23015568|ref|ZP_00055340.1| hypothetical protein Magn03010005 [Magnetospirillum magnetotacticum
MS-1]
Length = 308
Score = 96.5 bits (238), Expect = 3e-18, Method: Composition-based stats.
Identities = 32/282 (11%), Positives = 73/282 (25%), Gaps = 35/282 (12%)
Query: 22 YFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQEN 81
F + VD + + + +P + S+ + +
Sbjct: 23 VFGLPQFWREIPMEDAPIVVDIVPIGAKTNPPPLQDNKPQPE-PQKSEPEPPKPEPPKPE 81
Query: 82 GDRFSDQTKTHATENETKRSSSSKGEQA-------------------------------- 109
+ E + +
Sbjct: 82 PPKPEPPKPPPPPEPAPTPPAPPPPKPEPAPIPKPEPKPEPKPEPPPPPKPEPRPEPPKK 141
Query: 110 -LKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKS 168
L + DK+K + ++ L+ + + + + +
Sbjct: 142 TKDVKDELDSLLKSVDKKKPTPKDELDKLLKSTEKLKPSTPENKTATQTAPQSVRGSASH 201
Query: 169 SRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKIN-VDVVGG 227
+ S +R + WN+P+ K KL V + + G V +D +
Sbjct: 202 NPNEPVSMTERDRIRAHIERFWNVPAGAKDADKLVVMIKVSVLPDGTVTSAEVQLDPMMM 261
Query: 228 TELVRRMLRENARKAVIKSQAFRLSPSTYKSWRNITLFFVPS 269
+ ++AR+AV + + Y +++ TL F P
Sbjct: 262 VNPYYQAAADSARRAVRAASPLPIPVDKYDQFKDFTLAFNPK 303
>gi|254426980|ref|ZP_05040687.1| protein TolA [Alcanivorax sp. DG881]
gi|196193149|gb|EDX88108.1| protein TolA [Alcanivorax sp. DG881]
Length = 272
Score = 96.5 bits (238), Expect = 3e-18, Method: Composition-based stats.
Identities = 26/269 (9%), Positives = 72/269 (26%), Gaps = 9/269 (3%)
Query: 4 ENGLAISMILHVMFLLLLYFNFNV--QLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPV 61
G+ ++ +H++ LL F+++ L + + + K + V
Sbjct: 5 RVGVLFTLFIHLLVFGLLVFSWSTDPSLHKAPVVPPHVKATMVERSKQQKAPVAKPKTEV 64
Query: 62 VQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVS 121
+ + + + + + K + P
Sbjct: 65 KPTPKPAAKPKPKPKPEPKTEPKPKPKPKPAPKPTPKPEPKPKPAPDKKPDPVKKPDPKP 124
Query: 122 PYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAI 181
+ + AE++ + + + +
Sbjct: 125 APKPDPKPVVPDIDTPSVEEMLAEEELEMDRQSKASDQPDQEAASNADQADAEVASFTDA 184
Query: 182 VRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARK 241
+ V W IP +++ + ++ Q+ G V+ G + E+
Sbjct: 185 IAAHVGQRWRIPGNYRNRDDITTRVKIQMIPGGEVINVSVAQSSGYPD-----FDESVMN 239
Query: 242 AVIKSQAFRLSPSTY--KSWRNITLFFVP 268
AV + + + +R++ + F P
Sbjct: 240 AVKLASPLPVPDGQLFNEQFRSLVIEFDP 268
>gi|332559130|ref|ZP_08413452.1| TolA protein [Rhodobacter sphaeroides WS8N]
gi|332276842|gb|EGJ22157.1| TolA protein [Rhodobacter sphaeroides WS8N]
Length = 414
Score = 96.5 bits (238), Expect = 4e-18, Method: Composition-based stats.
Identities = 36/231 (15%), Positives = 73/231 (31%), Gaps = 6/231 (2%)
Query: 47 EDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQT--KTHATENETKRSSSS 104
D + +K+EE + +V + + E + + + + + +
Sbjct: 181 PDAETPPEEKVEEKPPAAPEEATTEIVTEATETEEVAQLAPTSSMRPKVRPQRARAPEPA 240
Query: 105 KGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSK 164
+ E S + Q + + ++ + ++
Sbjct: 241 EEEPTPASSRTETAEKPADKPAEKPAEKPAAQKPRKDEASIDAALAEAMGGGEEPAAEKP 300
Query: 165 VEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVL--GKINV 222
+ + D R V WN+ + V + + Q G +
Sbjct: 301 ASPARLGTAVTGDEKDKFRFAVQQCWNVGALSSDAMSTTVTVAMSMRQDGTPEAGSIRMI 360
Query: 223 DVVGGTELVRRMLRENARKAVIKSQA--FRLSPSTYKSWRNITLFFVPSKM 271
+ GGT+ R E AR+A+I+ A F L P Y WR + + F P+ M
Sbjct: 361 EASGGTDAGARQAFEAARRAIIRCGARGFPLPPEKYDQWREVEMVFDPNGM 411
>gi|221640125|ref|YP_002526387.1| TolA protein [Rhodobacter sphaeroides KD131]
gi|221160906|gb|ACM01886.1| TolA protein [Rhodobacter sphaeroides KD131]
Length = 414
Score = 96.5 bits (238), Expect = 4e-18, Method: Composition-based stats.
Identities = 37/231 (16%), Positives = 73/231 (31%), Gaps = 6/231 (2%)
Query: 47 EDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQT--KTHATENETKRSSSS 104
D + +K+EE + +V + + E + + + + + +
Sbjct: 181 PDAETPAEEKVEEKPPAAPEEATTEIVTEATETEEVAQLAPTSSMRPKVRPQRARAPEPA 240
Query: 105 KGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSK 164
+ E S + Q + + ++ + ++
Sbjct: 241 EEEPTPASSRTETAEKPADKPAEKPAEKPAAQKPRKDEASIDAALAEAMGGGEEPAAEKP 300
Query: 165 VEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVL--GKINV 222
+ + R V WN+ + V + L+Q G +
Sbjct: 301 ASPARSGPPVTSGEKDAFRVAVQQCWNVGALSSDALSTTVTVAMSLSQDGKPDAGSIRMI 360
Query: 223 DVVGGTELVRRMLRENARKAVIKSQA--FRLSPSTYKSWRNITLFFVPSKM 271
+ GGT+ R E AR+A+I+ A F L P Y WR + + F PS M
Sbjct: 361 ESSGGTDAGARQAFEAARRAIIRCGARGFPLPPEKYDQWREVEMVFDPSGM 411
>gi|241206186|ref|YP_002977282.1| outer membrane protein [Rhizobium leguminosarum bv. trifolii
WSM1325]
gi|240860076|gb|ACS57743.1| outer membrane protein [Rhizobium leguminosarum bv. trifolii
WSM1325]
Length = 379
Score = 96.5 bits (238), Expect = 4e-18, Method: Composition-based stats.
Identities = 37/246 (15%), Positives = 79/246 (32%), Gaps = 3/246 (1%)
Query: 29 LLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQ 88
+ P + + + E+ + + D
Sbjct: 132 VEQPKEVASIPPPKPVEVTPPKPEEKPPEEQAKPEEPPKPDAEALPDNVPTPVAKPQVKP 191
Query: 89 TKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKS 148
+ + + + + A + + + S + + + K
Sbjct: 192 PEPQKPAEKPPEKTPDQPKTADVPTDKKKADKKQETAKSASAMKSDFNADEVAALLNKTD 251
Query: 149 IDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHF 208
+ +E +KS+ SQ VR + NW + + + +K+H
Sbjct: 252 PSAGGAKRSTQEASLGAKKSNGGSKLSQSEEDAVRGLIEGNWLVTPGMEGLSGMVIKVHM 311
Query: 209 QLNQKGFVLGKINVD--VVGGTELVRRMLRENARKAVIKSQAFRL-SPSTYKSWRNITLF 265
+L++ G ++G+ V+ ++ RR L A +AV+KS F + Y++W L
Sbjct: 312 KLDKDGNIIGQPEVESSGGSSSDATRRALEGGAYRAVMKSAPFSMLPKDKYEAWNEFDLN 371
Query: 266 FVPSKM 271
F PS M
Sbjct: 372 FDPSSM 377
Score = 51.1 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/180 (13%), Positives = 56/180 (31%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
++ + S +LH + L + + E + VD + E + + P
Sbjct: 1 MKASVITSAVLHGLVLTWAMVSLGAPESFKVEDFEAMPVDLVPVESITQMQQGDKKAPKK 60
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
+ EN + KT N +S + + ++ P
Sbjct: 61 EISAPVPTTRPPIAQPAENAGDNNVDLKTPPVPNAKPSNSEAAAANSSEKPMPKTDPKPN 120
Query: 123 YDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIV 182
K + + T EQ + S K ++ +P++K + + + ++ V
Sbjct: 121 DVKDIVKEETEVEQPKEVASIPPPKPVEVTPPKPEEKPPEEQAKPEEPPKPDAEALPDNV 180
>gi|190893277|ref|YP_001979819.1| outer membrane protein [Rhizobium etli CIAT 652]
gi|190698556|gb|ACE92641.1| outer membrane protein [Rhizobium etli CIAT 652]
Length = 379
Score = 96.1 bits (237), Expect = 4e-18, Method: Composition-based stats.
Identities = 39/244 (15%), Positives = 79/244 (32%), Gaps = 3/244 (1%)
Query: 31 VPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTK 90
P + + + E+ + + D +
Sbjct: 134 QPKEVASIPPPKPVEVTPPKPEEKPPEEQAKPEEPPKPDAEALPDKVPTPVVKPQVKPPE 193
Query: 91 THATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSID 150
+ + + + A K + + + S + + + K
Sbjct: 194 PQKPAEKPPEKTPDEPKAAEKPTDKKKADKKQEVAKSASSMKSDFNADEISALLNKTDPS 253
Query: 151 TVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQL 210
+ +E +KS+ SQ +R+ + NW I + + +K+H +L
Sbjct: 254 AGGAKRSTQEASLGAKKSNGGSKLSQSEEDAMRSLIEGNWLITPGMEGLSGMVIKVHMKL 313
Query: 211 NQKGFVLGKINVD--VVGGTELVRRMLRENARKAVIKSQAF-RLSPSTYKSWRNITLFFV 267
++ G ++G+ V+ ++ RR L A +AV+KS F L Y +W L F
Sbjct: 314 DRDGNIIGQPEVESSGGSSSDSTRRALESGAYRAVMKSAPFTTLPKDKYDAWNEFDLNFD 373
Query: 268 PSKM 271
PS M
Sbjct: 374 PSSM 377
Score = 49.9 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 24/180 (13%), Positives = 57/180 (31%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
++ + S +LH + L + + + E + VD + E + + P
Sbjct: 1 MKTSVVTSAVLHCLVLTWAMVSLSAPESFKVEDFEAMPVDLVPVESITQMQQGDKKAPKK 60
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
+ EN + KT N +S + + ++ P
Sbjct: 61 ETSAPVPTTRPPVAQPAENAGDNNVDLKTPPVPNAKPSNSEAAAANSSEKPLPQVDPKPN 120
Query: 123 YDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIV 182
K+ + T +Q + S K ++ +P++K + + + ++ V
Sbjct: 121 DVKEVNKEETEVDQPKEVASIPPPKPVEVTPPKPEEKPPEEQAKPEEPPKPDAEALPDKV 180
>gi|126463083|ref|YP_001044197.1| hypothetical protein Rsph17029_2323 [Rhodobacter sphaeroides ATCC
17029]
gi|126104747|gb|ABN77425.1| hypothetical protein Rsph17029_2323 [Rhodobacter sphaeroides ATCC
17029]
Length = 414
Score = 95.7 bits (236), Expect = 6e-18, Method: Composition-based stats.
Identities = 37/231 (16%), Positives = 73/231 (31%), Gaps = 6/231 (2%)
Query: 47 EDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQT--KTHATENETKRSSSS 104
D + +K+EE + +V + + E + + + + + +
Sbjct: 181 PDAETPAEEKVEEKPPAAPEEATTEIVTEATETEEVAQLAPTSSMRPKVRPQRARAPEPA 240
Query: 105 KGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSK 164
+ E S + Q + + ++ + ++
Sbjct: 241 EEEPTPASSRTETAEKPADKPAEKPAEKPAAQKPRKDEASIDAALAEAMGGGEEPAAEKP 300
Query: 165 VEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVL--GKINV 222
+ + R V WN+ + V + L+Q G +
Sbjct: 301 ASPARSGPPVTSGEKDAFRVAVQQCWNVGALSSDALSTTVTVAMSLSQDGKPDAGSIRMI 360
Query: 223 DVVGGTELVRRMLRENARKAVIKSQA--FRLSPSTYKSWRNITLFFVPSKM 271
+ GGT+ R E AR+A+I+ A F L P Y WR + + F PS M
Sbjct: 361 ESSGGTDAGARQAFEAARRAIIRCGARGFPLPPEKYDQWREVEMVFDPSGM 411
>gi|85710725|ref|ZP_01041789.1| hypothetical protein NAP1_09947 [Erythrobacter sp. NAP1]
gi|85687903|gb|EAQ27908.1| hypothetical protein NAP1_09947 [Erythrobacter sp. NAP1]
Length = 269
Score = 95.7 bits (236), Expect = 6e-18, Method: Composition-based stats.
Identities = 35/271 (12%), Positives = 79/271 (29%), Gaps = 22/271 (8%)
Query: 4 ENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNE--DYHSSKYKKIEEPV 61
GL +++LH + LL P + + ++V + +
Sbjct: 11 RIGLIAAIVLHGALVALLAAQVLF-APEPFAPPQRVAVSLATEVSLESTAPNPTPESRAA 69
Query: 62 VQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVS 121
+ + + ++ S + + + + + + +
Sbjct: 70 IAPTLTDVPSPPQEASSEPAEETAPPTPPRPQSRTQPRTQAPPDTRDRRR---------- 119
Query: 122 PYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAI 181
P + ++ EQ G + R +
Sbjct: 120 PEETRQQPSQRRAEQPAGGSRIGDNFLEGQGSSTQTDATSAPAAA---FGRAERAALASA 176
Query: 182 VRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVD--VVGGTELVRRML---R 236
+ ++ +WN PS + + L + +QLN+ G + G+ T+ R
Sbjct: 177 ITRQLRPHWNAPSGVE-AELLESVVTWQLNEDGSLKGRPRCRNVSSSVTDSNRPQAGLHC 235
Query: 237 ENARKAVIKSQAFRLSPSTYKSWRNITLFFV 267
E A +AV + F L Y W+++ F
Sbjct: 236 ERAIRAVQLAAPFNLPEQFYNRWKDLEWEFN 266
>gi|115526696|ref|YP_783607.1| putative TolA [Rhodopseudomonas palustris BisA53]
gi|115520643|gb|ABJ08627.1| putative TolA [Rhodopseudomonas palustris BisA53]
Length = 314
Score = 95.7 bits (236), Expect = 6e-18, Method: Composition-based stats.
Identities = 41/312 (13%), Positives = 97/312 (31%), Gaps = 42/312 (13%)
Query: 1 MRLENGLAISMILHVMFLLLLYFNFN--VQLLVPISRREMLSVDNIYNEDYHSSKYKKIE 58
M+++ L S+ LHV+ + +F+ P + + + +
Sbjct: 1 MKVDKTLLASVALHVLVIGYGIVSFSARSLEAPPAESMPIDIISADQLSKLTAGNKSGEK 60
Query: 59 EPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHAT----------ENETKRSSSSKGEQ 108
+ E + +V + ++ +T T E + ++
Sbjct: 61 DKPKPLVEKVAEAKPVEDTVGKISEKAPVETAVAPTPPPKPVEKPVEKKPDPPKPVVEDK 120
Query: 109 ALKESALLRMPVSPYDKQKISKATNKEQDLQ----------------------------G 140
E + P I++A K+ +
Sbjct: 121 PKNEPKQVEKKPDPPKVDPIAEALKKDDSKKPTPKPEAKAAPPQPPKPKQERVFDQSKIA 180
Query: 141 ISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFK 200
++ S + SQ + +R R+ WN+ + +R +
Sbjct: 181 ALIDKRDPTRQAAAGAQLNSQASLGSPRGTSQTLSQSELDALRARLTQLWNVQAGTERPE 240
Query: 201 KLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLS-PSTYKSW 259
+L V + +L + + + V G+ + + A +AV++ Q + + TY W
Sbjct: 241 ELIVDIRIRLTPERRLAAPPEI-VSRGSSPRYQAAADAAMRAVLQGQPYEMLRAETYDQW 299
Query: 260 RNITLFFVPSKM 271
+++ + F P +M
Sbjct: 300 KDMIVTFDPRQM 311
>gi|167648383|ref|YP_001686046.1| hypothetical protein Caul_4428 [Caulobacter sp. K31]
gi|167350813|gb|ABZ73548.1| conserved hypothetical protein [Caulobacter sp. K31]
Length = 270
Score = 95.4 bits (235), Expect = 7e-18, Method: Composition-based stats.
Identities = 35/271 (12%), Positives = 78/271 (28%), Gaps = 17/271 (6%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPV 61
L S+ LH ++ + + P+ E + V + + ++ IE+ V
Sbjct: 10 NFSPALVGSIALHGAIVVAILIG-PWKPSKPVIIGESVPVTIVT--EGPTNVRPAIEDVV 66
Query: 62 VQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVS 121
Q + D + + S + +
Sbjct: 67 DQTAQTEAPTPQADPQPPAPVPAPVPTPAPAPPKAAAQAPSPKPTPSKPVPAKPEPDFFA 126
Query: 122 PYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAI 181
+K + + + + + AIA
Sbjct: 127 SLEKTLAKTPKATGKPVANAAKGPTRPE----------TATQARPGAGAMTGLQAAAIAG 176
Query: 182 VRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINV-DVVGGTELVRRMLRENAR 240
+++ + WN + + ++V++ F+L G ++G++ D + + A
Sbjct: 177 MKDEIQRRWNPNCEVEGGGDIQVRVAFKLATGGRIVGQVTAGDAERSPNSAVKAAADRAI 236
Query: 241 KAVIKSQAFR-LSPSTYKSWRNITLFFVPSK 270
+AV +S F L P Y + L F
Sbjct: 237 RAVYQSAPFEGLPPDYYGQ--QLNLNFKARD 265
>gi|110635501|ref|YP_675709.1| TolA, TolA protein [Mesorhizobium sp. BNC1]
gi|110286485|gb|ABG64544.1| Cell division and transport-associated protein TolA [Chelativorans
sp. BNC1]
Length = 351
Score = 95.4 bits (235), Expect = 8e-18, Method: Composition-based stats.
Identities = 39/232 (16%), Positives = 77/232 (33%), Gaps = 1/232 (0%)
Query: 40 SVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETK 99
V+ E + + A
Sbjct: 120 PVETPQEAKAEEVPVPTPEREPEPQPRQEVKPNPAPEPLVAENAEGESVKLPPAAPVPQA 179
Query: 100 RSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKK 159
R K + A + KQ + + Q + K+ + +
Sbjct: 180 RPQPPKPQIAKAPERKEAEKPAAEQKQASRATKDDQVLDQVAALLNKEKASGGGAKRSTE 239
Query: 160 ELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGK 219
+ +++ SQ + +R ++ WN+P+ + LRV + F+L+ G V G+
Sbjct: 240 QAALGASQATSGDKLSQSEMDALRAQIERCWNVPAGALDAENLRVSVKFKLDPSGAVEGR 299
Query: 220 INVDVVGGTELVRRMLRENARKAVIKSQAFRLSPSTYKSWRNITLFFVPSKM 271
+ GG+ V R E+AR+AV++ + L Y +W ++ + F P+ M
Sbjct: 300 PEIIEGGGS-GVARAAAESARRAVLQCAPYNLPSEKYSAWADVIVHFDPTDM 350
Score = 52.2 bits (123), Expect = 7e-05, Method: Composition-based stats.
Identities = 20/148 (13%), Positives = 37/148 (25%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
+ GLA S+ LH + + + ++ E VD + D + + E PV
Sbjct: 1 MRAGLATSVTLHAVLIGFGIVSLQAPRAFEVADVEAFPVDIVPVGDISQVQQGEKEAPVA 60
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
+ K T R E + P
Sbjct: 61 TRPTPKPTQRQDPVENAQKVGEADTDLKPPPTPEAKPRPVEQASEPPPSPKPQPKPVEKP 120
Query: 123 YDKQKISKATNKEQDLQGISFAEKKSID 150
+ + +KA + +
Sbjct: 121 VETPQEAKAEEVPVPTPEREPEPQPRQE 148
>gi|327193467|gb|EGE60363.1| putative signal peptide protein [Rhizobium etli CNPAF512]
Length = 132
Score = 95.4 bits (235), Expect = 8e-18, Method: Composition-based stats.
Identities = 21/113 (18%), Positives = 50/113 (44%), Gaps = 1/113 (0%)
Query: 156 PDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGF 215
E + + S + +R+ + + + + K +R+ +H +L + G
Sbjct: 14 DANAEAADRRNSDANSPRISVAEVQALRDAIERQYFVDNRLKDIDSVRLTIHIKLARDGQ 73
Query: 216 VLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRL-SPSTYKSWRNITLFFV 267
++G +V V GG+E ++ L ++ +AV ++ F + Y +W+ + F
Sbjct: 74 IVGNPDVQVTGGSERAQKSLTDSGLRAVRRAAPFTMLPKDKYDAWKEVVFNFD 126
>gi|256061735|ref|ZP_05451872.1| hypothetical protein Bneo5_15446 [Brucella neotomae 5K33]
gi|261325739|ref|ZP_05964936.1| TolA protein [Brucella neotomae 5K33]
gi|261301719|gb|EEY05216.1| TolA protein [Brucella neotomae 5K33]
Length = 356
Score = 95.0 bits (234), Expect = 9e-18, Method: Composition-based stats.
Identities = 42/222 (18%), Positives = 83/222 (37%), Gaps = 2/222 (0%)
Query: 50 HSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQA 109
+++ + EP + K + + + + K A E + K + +
Sbjct: 136 PANEMQAEPEPKQEVKPDPVAEAIEKQAEAPDAEALKLPDKVPAPEAKPKPPQAQTAKTN 195
Query: 110 LKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSS 169
++ + + SK ++ + +K S D+ L K ++
Sbjct: 196 ERKQPEEKKKTQSASQTSQSKNDAIADEVAALLNKQKASGGGAKRSTDQASLGGKK--NT 253
Query: 170 RKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTE 229
SQ + +R + WN+P+ L V + +L + G + G V GG +
Sbjct: 254 GGSKLSQSEMDALRGAISKCWNVPAGVADAPGLVVTVKMKLAEDGSIQGTPEVTSGGGAD 313
Query: 230 LVRRMLRENARKAVIKSQAFRLSPSTYKSWRNITLFFVPSKM 271
V R E+AR+AV++ + L Y SW + + F S+M
Sbjct: 314 GVARAAAESARRAVMRCAPYNLPVDKYDSWSEVIVNFDSSEM 355
Score = 37.6 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 25/170 (14%), Positives = 52/170 (30%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
++ GL S++LH + + L +F+ + E VD + E + + P+
Sbjct: 1 MKAGLTSSVVLHAVAVALAVVSFSSPKAFDVQDSESFPVDIVPIESLTQIQQGDKKAPMK 60
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
+ + EN TKT + + + E + + + P
Sbjct: 61 EKSAPVPTTRPQTVPNAENFGDQEVDTKTPPKPDAKAKPIETAEEPKAQPEPVKKPEPKP 120
Query: 123 YDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKR 172
K + AE + V P + + + E +
Sbjct: 121 DPKPEPKPEEKPTPVPANEMQAEPEPKQEVKPDPVAEAIEKQAEAPDAEA 170
>gi|306844690|ref|ZP_07477275.1| tolA protein [Brucella sp. BO1]
gi|306274862|gb|EFM56632.1| tolA protein [Brucella sp. BO1]
Length = 298
Score = 95.0 bits (234), Expect = 1e-17, Method: Composition-based stats.
Identities = 43/225 (19%), Positives = 84/225 (37%), Gaps = 2/225 (0%)
Query: 47 EDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKG 106
+++ + EP + K + + + + K A E + K +
Sbjct: 75 TPVPANEMQAEPEPKQEVKPGPVAEAIEKQAEAPDAEALKLPDKVPAPEAKPKPPQAQTA 134
Query: 107 EQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVE 166
+ ++ + + SK ++ + +K S D+ L K
Sbjct: 135 KTNERKQPEEKKKTQSASQTSQSKNDAIADEVAALLNKQKASGGGAKRSTDQASLGGKK- 193
Query: 167 KSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVG 226
++ SQ + +R + WN+P+ L V + +L + G + G V G
Sbjct: 194 -NTGGSKLSQSEMDALRGAISKCWNVPAGVADAPGLVVTVKMKLAEDGSIQGTPEVTSGG 252
Query: 227 GTELVRRMLRENARKAVIKSQAFRLSPSTYKSWRNITLFFVPSKM 271
G + V R E+AR+AV++ + L Y SW + + F PS+M
Sbjct: 253 GADGVARAAAESARRAVMRCAPYNLPVDKYDSWSEVIVNFDPSEM 297
>gi|86359055|ref|YP_470947.1| signal peptide protein [Rhizobium etli CFN 42]
gi|86283157|gb|ABC92220.1| probable signal peptide protein [Rhizobium etli CFN 42]
Length = 380
Score = 94.6 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 40/247 (16%), Positives = 85/247 (34%), Gaps = 4/247 (1%)
Query: 29 LLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQ 88
+ P + + + E+ + + D
Sbjct: 132 VEQPKEVASIPPPKPVEVTPPKPEEKPPEEQAKPEEPPKPDAEALPDKVPTPVVKPQVKP 191
Query: 89 TKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKS 148
+ + + + + A K + + + S + + + K
Sbjct: 192 PEPRKAAEKPPEKPADEPKAAEKPTDKKKADKKQEVAKSASTMKSDFNADEISALLNKTD 251
Query: 149 IDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHF 208
+ +E +KS+ SQ VR+++ +NW++ S ++++++ F
Sbjct: 252 PSAGGAKRSTQEASLGNKKSNSGAKLSQSEEDAVRSQISSNWSVVSGLAGASEVQLQVRF 311
Query: 209 QLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFR-LSPSTYK---SWRNITL 264
QL+Q G V+G V GG E R+ L+ + +AV+KS + L Y+ W + L
Sbjct: 312 QLDQAGNVVGDPEVIATGGPESTRQALKSSVYRAVMKSSPLKNLPADKYEGENGWNEMRL 371
Query: 265 FFVPSKM 271
F S +
Sbjct: 372 TFDASDL 378
Score = 47.2 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 24/180 (13%), Positives = 58/180 (32%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
++ + S +LH + L + + + E + VD + E + + P
Sbjct: 1 MKASVVTSAVLHCLVLTWAMVSLSAPESFKVEDFEAMPVDLVPVESITQMQQGEKTAPKK 60
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
+ + EN + KT N ++ + + ++ P
Sbjct: 61 ETSAPVPTTRPPIPQLAENAGDNNIDLKTPPVPNAKPSNTEAAAANSSEKPLPTTDPKPN 120
Query: 123 YDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIV 182
K+ + T EQ + S K ++ +P++K + + + ++ V
Sbjct: 121 DVKEVNKEETEVEQPKEVASIPPPKPVEVTPPKPEEKPPEEQAKPEEPPKPDAEALPDKV 180
>gi|285019007|ref|YP_003376718.1| tonb protein [Xanthomonas albilineans GPE PC73]
gi|283474225|emb|CBA16726.1| putative tonb protein [Xanthomonas albilineans]
Length = 293
Score = 93.8 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 42/263 (15%), Positives = 85/263 (32%), Gaps = 16/263 (6%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP- 60
RL L +S+I+H + +L + F + + + + S + + + +
Sbjct: 17 RLGVTLVLSLIVHGLLILGIGFAIDDDAPLVPTLDVIFSQTSTPLTPKQADFLAQANQQG 76
Query: 61 -----VVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESAL 115
Q SQ +V QT A E + SS + E+ L +
Sbjct: 77 GGDHATPQRPRESQPGVVPQQEDGVAPQALRAQTAAAAPEPTPRVVSSVRSEEPLPLAQ- 135
Query: 116 LRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPS 175
P++ + + + AE + ++ +S +
Sbjct: 136 -TQPLTDDPLRPVDAQREQRDAEMARLAAEVHLRSEQYAKRPNRKFVSASTREYAYANYL 194
Query: 176 QDAIAIVRNRVIANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRM 234
+ + R + N N P D +R + +V + + + G V + G M
Sbjct: 195 RAWVD--RAEHVGNLNYPDDVRRRQLGGQVVISVGVRRDGSVESSRILRSSG-----VPM 247
Query: 235 LRENARKAVIKSQAFRLSPSTYK 257
L A + V +Q + P T+
Sbjct: 248 LDAAALRIVRLAQPYPPLPHTHD 270
>gi|192290294|ref|YP_001990899.1| hypothetical protein Rpal_1901 [Rhodopseudomonas palustris TIE-1]
gi|192284043|gb|ACF00424.1| conserved hypothetical protein [Rhodopseudomonas palustris TIE-1]
Length = 284
Score = 93.8 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 38/268 (14%), Positives = 84/268 (31%), Gaps = 6/268 (2%)
Query: 4 ENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQ 63
G A+S++ HVM + + V + + + V+ + ++ +K E
Sbjct: 19 RAGAAVSVLAHVMLVGAVLLLAEVHPFAEVPEQR-IEVEVVTADEAPPPVPEKEPESKPV 77
Query: 64 FKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPY 123
+ + + + + Q + ETK + + Q + A P
Sbjct: 78 EQPTPNFEVSQTPTEQPKPQQQQPTPAAKPQPAETKPPAPAPQPQNAQAPAPPPQPQPAP 137
Query: 124 DKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVR 183
+ A + P + + S DA+A +R
Sbjct: 138 PQPAPQAAAAPYPPAIPQEPDITVKYSVALGLPAEGGF---DAPAETVANISADAVAALR 194
Query: 184 NRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAV 243
R+ A +P+ +++ + L G + + + + L + A A+
Sbjct: 195 KRLKACAALPAGLSPSDNVKIVIRVGLTPDGRLAQEPFLIEASASAK-GPALMKGAIAAL 253
Query: 244 IKSQAFRL-SPSTYKSWRNITLFFVPSK 270
Q + + Y+ WR + + F P
Sbjct: 254 EACQPYTMLPADKYREWRILDIGFTPQD 281
>gi|92117950|ref|YP_577679.1| hypothetical protein Nham_2429 [Nitrobacter hamburgensis X14]
gi|91800844|gb|ABE63219.1| conserved hypothetical protein [Nitrobacter hamburgensis X14]
Length = 287
Score = 93.8 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 40/268 (14%), Positives = 79/268 (29%), Gaps = 6/268 (2%)
Query: 5 NGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQF 64
A S H+ L+F E ++VD + +++ S + + EP Q
Sbjct: 20 RSAAASFAGHMALAAGLFFA--EAHPFDYVSPEPIAVDIVSSKEIPSPAKEALPEP-PQT 76
Query: 65 KGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYD 124
+ + D + D + K +T + +SS A SA +
Sbjct: 77 SSTDTFDSPDDKPQADTADTKAATAKAQSTPAQASPASSETSLPAPSSSAPMPPASKQAA 136
Query: 125 KQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLS-KVEKSSRKRIPSQDAIAIVR 183
Q + + V++ + + K A R
Sbjct: 137 LQPAPQPRPAPPPSYNAPEPDISVRYGVLLGLPVSGVGDGSGAAEATKADIPAMDTAQFR 196
Query: 184 NRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAV 243
+ +P+ +R+ + G + + + L + A A+
Sbjct: 197 RHLKTCSKMPASVSPGDNIRIVLRVPFTTDGKIAAPPALIEASASAK-GPALMKGAIAAL 255
Query: 244 IKSQAF-RLSPSTYKSWRNITLFFVPSK 270
+ Q + L P Y W+ + L F P
Sbjct: 256 VACQPYAMLPPDKYDEWKVLDLSFTPRD 283
>gi|325914159|ref|ZP_08176512.1| outer membrane transport energization protein TonB (TC 2.C.1.1.1)
[Xanthomonas vesicatoria ATCC 35937]
gi|325539662|gb|EGD11305.1| outer membrane transport energization protein TonB (TC 2.C.1.1.1)
[Xanthomonas vesicatoria ATCC 35937]
Length = 291
Score = 93.4 bits (230), Expect = 3e-17, Method: Composition-based stats.
Identities = 38/259 (14%), Positives = 77/259 (29%), Gaps = 17/259 (6%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP- 60
R+ L IS++LH +L + F + + + + S + + + +
Sbjct: 16 RMSAMLVISLLLHAALILGVGFTVSEDAPLVPTLDVIFSQTSTPLTPKQADFLAQANQQG 75
Query: 61 -----VVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESAL 115
Q SQ +V + +T+ SS +GEQA+
Sbjct: 76 GGNHDTAQRPRDSQPGVVPQDRTGLAPQAQRATSVQAPEPTQTRVVSSRRGEQAVPTPQP 135
Query: 116 LRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPS 175
+ AE + ++ +S +
Sbjct: 136 NPQTDPLTPAD---APRVQRDAEMARLAAEVHLRSEQYAKRPNRKFVSASTREYAYANYL 192
Query: 176 QDAIAIVRNRVIANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRM 234
+ + R + N N P + +R + +V + + + G V + G
Sbjct: 193 RAWVD--RAERVGNLNYPDEARRRRLGGKVVISVGVRRDGSVESSRVLVSSG-----VPA 245
Query: 235 LRENARKAVIKSQAFRLSP 253
L + A + V +Q F P
Sbjct: 246 LDDAALRVVQLAQPFPPLP 264
>gi|126728385|ref|ZP_01744201.1| putative CheA signal transduction histidine kinases, no good domain
identification [Sagittula stellata E-37]
gi|126711350|gb|EBA10400.1| putative CheA signal transduction histidine kinases, no good domain
identification [Sagittula stellata E-37]
Length = 372
Score = 93.4 bits (230), Expect = 3e-17, Method: Composition-based stats.
Identities = 31/228 (13%), Positives = 65/228 (28%), Gaps = 6/228 (2%)
Query: 49 YHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQ 108
E E+ QE+ T+ E +
Sbjct: 143 APPDPEAVTSEDTQTAADPDAESPDVAEETQESTAPPETTTEIVTEAEEPSGQPLAPSSS 202
Query: 109 ALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKS--IDTVVVRPDKKELLSKVE 166
++ +P + + + S ++
Sbjct: 203 MRPRGRPEQVASNPEPAPETPAQQPPASEPETDSAPANDPVADALAAAIAEELSGGGGAP 262
Query: 167 KSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLG-KINVDVV 225
+ + +R V A W + + ++V + F L+++G V G +
Sbjct: 263 DAPSGPPLTSGEREGLRIAVQACWIVDVG-SQAADVKVTVGFDLDREGRVAGNVTMIGAE 321
Query: 226 GGTELVRRMLRENARKAVIKSQA--FRLSPSTYKSWRNITLFFVPSKM 271
GG+ AR+A+++ Q ++L P Y W+ + + F P M
Sbjct: 322 GGSGAAVDTAFGAARRAILRCQGDGYQLPPEKYDQWKRVEITFNPEDM 369
>gi|42521813|ref|NP_967193.1| TonB-like protein [Bdellovibrio bacteriovorus HD100]
gi|39574343|emb|CAE77847.1| TonB-like protein [Bdellovibrio bacteriovorus HD100]
Length = 286
Score = 93.4 bits (230), Expect = 3e-17, Method: Composition-based stats.
Identities = 35/263 (13%), Positives = 83/263 (31%), Gaps = 15/263 (5%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPV 61
++ G+ IS LH + + + PI + + VD + D K
Sbjct: 14 QVTRGIGISFALHALIISIFTLKTVFFDPEPIDFSQAVRVDMVGLPDKVEPKDLAPPAKE 73
Query: 62 VQFKGSSQENLVRDFSVQENGDRFSD---QTKTHATENETKRSSSSKGEQALKESALLRM 118
++ + ++ ++ ++ + + KT K + E+ + +
Sbjct: 74 NPKPALPEKEVAKEPVKEKPPEKAPEKVVEKKTPPKPEPVKLPPAKAKEEGINLEKVKSQ 133
Query: 119 PVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKE------LLSKVEKSSRKR 172
+ DK K A K ++ + + L + +
Sbjct: 134 QQNALDKLKAMAALEKIKEDVAEDKKKAAAAAGTGKAATGSTPVRGNVLSPGTSLTGIAK 193
Query: 173 IPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVR 232
+ + + I+ + + NW IP + + ++ ++ +G +LG+ V G
Sbjct: 194 LQNDNYISDLDRHIKQNWTIPEWLA-KRDYKAQVRVFVDSRGNILGRKIVKSSGN----- 247
Query: 233 RMLRENARKAVIKSQAFRLSPST 255
E + +S F P
Sbjct: 248 PSYDEEVLATIDRSAPFPAPPEK 270
>gi|222149662|ref|YP_002550619.1| hypothetical protein Avi_3620 [Agrobacterium vitis S4]
gi|221736644|gb|ACM37607.1| conserved hypothetical protein [Agrobacterium vitis S4]
Length = 389
Score = 93.0 bits (229), Expect = 3e-17, Method: Composition-based stats.
Identities = 34/210 (16%), Positives = 84/210 (40%), Gaps = 1/210 (0%)
Query: 62 VQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVS 121
+ + L + + + E K + + +A K + + +
Sbjct: 178 QEVAKAEDIPLPTSVPLPASKPKPEPPKPAETKTPEPKPTEAKPKTEAAKAPDVKKADKN 237
Query: 122 PYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAI 181
+ S + + + K + ++ +K++ SQ +
Sbjct: 238 QQAAKAKSSKESDFNADEIAALLNKTDAAGGGAKRSTEQAALGGKKTTGGSTLSQSEMDA 297
Query: 182 VRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARK 241
+R + NW++ S + + ++ HF+L++ G ++G+ V GG+ ++++ +AR+
Sbjct: 298 LRGAIQNNWSVLSGMGDAQGMVIRAHFKLDESGNLIGEPEVTATGGSPSAQQVMISSARR 357
Query: 242 AVIKSQAFR-LSPSTYKSWRNITLFFVPSK 270
A++KS F+ L Y +W + + F PS+
Sbjct: 358 AILKSVPFKNLPVEKYDAWSEVVVNFDPSE 387
Score = 54.9 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 21/145 (14%), Positives = 42/145 (28%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
++ L S ILH L + + + ++ E L VD + + + + P
Sbjct: 1 MKGSLVTSAILHATLLAMALVTISAPAPMQVADVEALPVDIVPISELTQIQQGDKKAPKR 60
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
+ + EN KT T ++ + + L
Sbjct: 61 EKSAPTPTKKPSTVQNAENMGDNEVDMKTPPTPSKKPSQQETAAAPEKVDKVLPTQDNET 120
Query: 123 YDKQKISKATNKEQDLQGISFAEKK 147
D ++I+K + K
Sbjct: 121 NDVKEIAKEETAVAPSKEAVPVPKD 145
>gi|253997445|ref|YP_003049509.1| protein TolA [Methylotenera mobilis JLW8]
gi|253984124|gb|ACT48982.1| protein TolA [Methylotenera mobilis JLW8]
Length = 268
Score = 92.7 bits (228), Expect = 4e-17, Method: Composition-based stats.
Identities = 35/268 (13%), Positives = 84/268 (31%), Gaps = 15/268 (5%)
Query: 5 NGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQF 64
+S+ +H + L L +FN + P+S E V+ + S+
Sbjct: 13 KAGVLSISVHAILLGALLISFNWKTTHPVSVAE---VELWDSLPAASAPVVTTPVVKEIP 69
Query: 65 KGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYD 124
K + + + + K + K+ + + + + ++
Sbjct: 70 KPEPKLEPKPEPKPEPEIAIKHEAQKKPEKKEPLKKVAIKEPPKEPAKPVKKTDQLAELQ 129
Query: 125 KQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRN 184
KQ + + K + +K +++ ++ + S+ K + A ++
Sbjct: 130 KQLLQEPAEKPKKPPVNDALKKLQQESLGD----TGTSAEPKASAAKAGVVDEFKAKIQA 185
Query: 185 RVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVI 244
++ N + V+ L G + + G + +A+
Sbjct: 186 KIRNN--VIKSSCGDGNPEVRFEITLLPTGELGAAPKLTKSSGIAG----CDDAVERAIR 239
Query: 245 KSQAFRLSPST--YKSWRNITLFFVPSK 270
S+ L + +R + L F PSK
Sbjct: 240 ASEPLPLPEDKTLFPQFRTLKLTFHPSK 267
>gi|209884913|ref|YP_002288770.1| hypothetical protein OCAR_5779 [Oligotropha carboxidovorans OM5]
gi|209873109|gb|ACI92905.1| conserved hypothetical protein [Oligotropha carboxidovorans OM5]
Length = 262
Score = 92.7 bits (228), Expect = 4e-17, Method: Composition-based stats.
Identities = 35/266 (13%), Positives = 78/266 (29%), Gaps = 34/266 (12%)
Query: 4 ENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQ 63
G A+S+++H+ L L+ V+L + + V+ +
Sbjct: 24 RAGGAVSILVHLGLLGLIIMGSGVKLY-DHAPPPSIDVELV------------------- 63
Query: 64 FKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPY 123
G T E E+ +++ + +E+ ++P
Sbjct: 64 ----------PPSEAPPEGLSLPQLDPTPPAETESAQATETPEPPKPEEAPTPLQVITPA 113
Query: 124 DKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVR 183
+ E + + + + P + +D +A R
Sbjct: 114 PTPAEPAPSPAEVTALSGAPVVEPDVMNLYGDPFLTGG--GFTEEKEAAHLKKDIVAAFR 171
Query: 184 NRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAV 243
+ + +P+ R+ + L G + + + ++ + A A+
Sbjct: 172 AHLKSCLKLPAGVAPTDNARIVLRVALKPDGRLAATPAL-MEAKASPKGPLIMKAAIHAL 230
Query: 244 IKSQAF-RLSPSTYKSWRNITLFFVP 268
Q + L YK WR + L F P
Sbjct: 231 EACQPYGMLPADKYKEWRQLDLEFTP 256
>gi|194366863|ref|YP_002029473.1| TonB family protein [Stenotrophomonas maltophilia R551-3]
gi|194349667|gb|ACF52790.1| TonB family protein [Stenotrophomonas maltophilia R551-3]
Length = 294
Score = 92.7 bits (228), Expect = 5e-17, Method: Composition-based stats.
Identities = 37/264 (14%), Positives = 86/264 (32%), Gaps = 15/264 (5%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEE-- 59
RL +A+S+++H + +L + F + + + S + +
Sbjct: 17 RLGATIALSVLVHALLILGVGFAVKGDAPLVPTLEVIFSQTRTALTPKQADFLAAASQEG 76
Query: 60 ----PVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESAL 115
Q +Q +V + Q+ + + SS GE + ++
Sbjct: 77 GGEHDRAQRPRDNQAGIVPQAQSGLSPVPQQQQSAAPVPPPQARVVSSRNGEDTVVQAQS 136
Query: 116 LRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPS 175
P+ P ++ ++ ++ ++ RP ++ +S
Sbjct: 137 RPTPLEPTPDAPMTAREQRDAEMARLAAEVHLRSAQYAKRP-NRKFVSASTHEYAYANYL 195
Query: 176 QDAIAIVRNRVIANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRM 234
+ + R + N N P + ++ + +V + + + G V + G +
Sbjct: 196 RAWVD--RAEQVGNLNYPDEARQRRLGGQVVISVGVRRDGSVESSRILRSSGT-----PL 248
Query: 235 LRENARKAVIKSQAFRLSPSTYKS 258
L E A + V +Q F P T
Sbjct: 249 LDEAALRVVQLAQPFPPLPKTEDE 272
>gi|289662011|ref|ZP_06483592.1| TonB protein [Xanthomonas campestris pv. vasculorum NCPPB702]
Length = 291
Score = 92.7 bits (228), Expect = 5e-17, Method: Composition-based stats.
Identities = 41/261 (15%), Positives = 80/261 (30%), Gaps = 17/261 (6%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP- 60
RL L IS++LH +L + F + + + + S + + + +
Sbjct: 16 RLMMTLVISLLLHGALILGVVFAVSEDAPLVPTLDVIFSQTSTPLTPKQADFLAQANQQG 75
Query: 61 -----VVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESAL 115
VQ SQ +V + +T+ +S +GEQA+
Sbjct: 76 GGNHDTVQRPRDSQPGVVPQDRTGLAPQAQRATSVNAPEPTQTRVVTSRRGEQAVPTPQP 135
Query: 116 LRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPS 175
+ AE + ++ +S +
Sbjct: 136 NPQTDPLTPAD---AQRVQRDAEMARLAAEVHLRSEQYAKRPNRKFVSASTREYAYANYL 192
Query: 176 QDAIAIVRNRVIANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRM 234
+ + R + N N P D +R + +V + + + G V + G +
Sbjct: 193 RAWVD--RAERVGNLNYPDDARRRRLGGKVVISVGVRRDGSVESSRVLVSSG-----VPL 245
Query: 235 LRENARKAVIKSQAFRLSPST 255
L + A + V +Q F P T
Sbjct: 246 LDDAALRVVQLAQPFPPLPKT 266
>gi|83592429|ref|YP_426181.1| hypothetical protein Rru_A1093 [Rhodospirillum rubrum ATCC 11170]
gi|83575343|gb|ABC21894.1| hypothetical protein Rru_A1093 [Rhodospirillum rubrum ATCC 11170]
Length = 341
Score = 92.3 bits (227), Expect = 6e-17, Method: Composition-based stats.
Identities = 24/174 (13%), Positives = 56/174 (32%), Gaps = 2/174 (1%)
Query: 98 TKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPD 157
++ + +K + E + K+ + G + P
Sbjct: 163 AEKKAETKPVEKKAEKKPEKKKDDFDSLLSAVNQLEKKVEKPGKGKQADAASTEEEATPQ 222
Query: 158 KKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVL 217
+ + + I +R V WN + + + V + +N G V
Sbjct: 223 PQAARPTNQGGRISNTLTMSEIDSIRYHVEQRWNYNQGGRGVEGMSVDVQVSINPDGSVA 282
Query: 218 GKINV-DVVGGTELVRRMLRENARKAVIKSQAFRLSPSTYKSWRN-ITLFFVPS 269
+ D + V + L ++A +AV+++ + + + + TL F P+
Sbjct: 283 RAKALRDPAFAGDAVYKALADSAERAVMRASPLPVPRDKFDMFADGFTLRFAPT 336
>gi|300023931|ref|YP_003756542.1| protein TolA [Hyphomicrobium denitrificans ATCC 51888]
gi|299525752|gb|ADJ24221.1| protein TolA [Hyphomicrobium denitrificans ATCC 51888]
Length = 384
Score = 92.3 bits (227), Expect = 6e-17, Method: Composition-based stats.
Identities = 26/177 (14%), Positives = 61/177 (34%), Gaps = 1/177 (0%)
Query: 95 ENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVV 154
+ + + + K E A K+ R+ + + +
Sbjct: 208 KKKKQEEARKKAEAAKKQFDPSRIASILDKSPEDAPPKALLDKDPRKKGQQAAGSSATAE 267
Query: 155 RPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKG 214
+ ++ + + ++++++ W P + V++H+++N G
Sbjct: 268 KTGREAGTATGTDTVLSLREQDMLKGMIKSQLNGCWRPPGTGGGEEVPVVELHWEMNPDG 327
Query: 215 FVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPSTYKSWRNITLFFVPSKM 271
+ G+ V ++ E A +AV FRL P Y +W+ + F P +M
Sbjct: 328 SLSGEPRVT-SAPPTTAGQVYTEAALRAVRMCAPFRLPPDKYNAWKIVDWTFDPRQM 383
Score = 46.0 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 13/162 (8%), Positives = 39/162 (24%), Gaps = 1/162 (0%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
+ GL +S+ H L F+ + ++ D I ++ K + +
Sbjct: 1 MPFGLVLSLAFHAALLGWALFSMRSVPALTPDTP-AIAADIITPSEFLRLKQGSEDAKNL 59
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
+ + + + + E + ++ A
Sbjct: 60 ETRAKEEPKPDDSKNDTAKPSNAAPPPPPPPQEQQVAKAEPPPEAAEPPPPAEPPKAAEQ 119
Query: 123 YDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSK 164
K+ + + +++L +
Sbjct: 120 VKPPPPPDPIAKKLEEPPPPPEPAPGPTPDEKKILEQKLEDE 161
>gi|222086975|ref|YP_002545509.1| signal peptide protein [Agrobacterium radiobacter K84]
gi|221724423|gb|ACM27579.1| signal peptide protein [Agrobacterium radiobacter K84]
Length = 410
Score = 92.3 bits (227), Expect = 7e-17, Method: Composition-based stats.
Identities = 34/226 (15%), Positives = 74/226 (32%), Gaps = 10/226 (4%)
Query: 56 KIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESAL 115
PV K + + D A + + S+ + +
Sbjct: 183 PNNVPVPDVKPQPTPPKTAEQKPEVKPAPKPDVKVADAKPTDKTTTQSTSKTTSADDGKK 242
Query: 116 LRMPVSPYDK-------QKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKS 168
K ++ K+S D + KS
Sbjct: 243 DADKKRESAKGSNKGLDDGLADEIANVLSNTSSKGGAKRSSQQASAGADTQVSTRGGMKS 302
Query: 169 SRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGT 228
SQ +R+ + WN+ + +R+K+HF+L++ G ++G+ GG
Sbjct: 303 LGGGKLSQSQQDGLRDLIAKYWNLMPGLEGAGDVRIKVHFRLDKSGQIVGEPEATTSGGP 362
Query: 229 ELVRRMLRENARKAVIKSQA--FRLSP-STYKSWRNITLFFVPSKM 271
+ ++ A +AV+++Q+ ++ P Y W+ + + F + +
Sbjct: 363 ASTQSAMQSAAVRAVMRAQSDYLKVLPVDKYDDWQEVVVNFSAADL 408
Score = 46.8 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 20/134 (14%), Positives = 44/134 (32%), Gaps = 1/134 (0%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHS-SKYKKIEEPV 61
++ L S + H++ L+ + + VD + + K + + V
Sbjct: 1 MKRSLVTSAVFHILVLVGAMLTLTAPAPLETPESTAMDVDIVTADQLQQGEKKAPVTDHV 60
Query: 62 VQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVS 121
+ + + Q+ + +V EN + + + K A R
Sbjct: 61 SRKQTTKQDQVANAQNVGENNVDIKNPVVPTQRPESDTAALAPKKVDAPVPQNDPRPNDV 120
Query: 122 PYDKQKISKATNKE 135
+QK ++A KE
Sbjct: 121 KTIEQKDTEAAPKE 134
>gi|316932663|ref|YP_004107645.1| putative TolA [Rhodopseudomonas palustris DX-1]
gi|315600377|gb|ADU42912.1| putative TolA [Rhodopseudomonas palustris DX-1]
Length = 332
Score = 91.9 bits (226), Expect = 8e-17, Method: Composition-based stats.
Identities = 37/330 (11%), Positives = 87/330 (26%), Gaps = 65/330 (19%)
Query: 1 MRLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNE------------- 47
M+++ A S+ LH + L +F+ + + ++ ++VD I +
Sbjct: 1 MKIDKTWAASVALHALVLGWAMLSFSSKAFE-LEPQDSVAVDTISEDQLAKVMAGMRTGK 59
Query: 48 ---DYHSSKYKKIEEPVVQFKGSSQENLV------------------------------- 73
+ +PV G E
Sbjct: 60 KENPKPLVEKVAEAKPVDDTVGKISEKAPVVTDTSPPPQPKPKPEEKPVEKKPDPPKPVV 119
Query: 74 ----------------RDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLR 117
+ + + + K + + + K E+
Sbjct: 120 KEEPKKEEPKKEEPKKAEKKPEPAKEEAKEAEKKPEPKVDPIAEALKKEEKKKPPPKPTE 179
Query: 118 MPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQD 177
P ++ K +Q ++ V + + S
Sbjct: 180 AAAKPPEQTKPKPERVFDQSKIAALLDKRDPTRNAVTGDALNSNAALGLSKGKSADNSAT 239
Query: 178 AIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRE 237
A+ +++V W P ++ +L + G + + R+ +E
Sbjct: 240 WGAMFQSQVERCWKKPYGGIEAQRAEAAFVIRLKRDGSLEAMPQPEGH-PATPYLRVYQE 298
Query: 238 NARKAVIKSQAFRLSPSTYKSWRNITLFFV 267
+A +A+I+ Q + L + W+ F
Sbjct: 299 SALRAIIECQPYNLPAQFFDEWKFFAPVFT 328
>gi|254419795|ref|ZP_05033519.1| hypothetical protein BBAL3_2105 [Brevundimonas sp. BAL3]
gi|196185972|gb|EDX80948.1| hypothetical protein BBAL3_2105 [Brevundimonas sp. BAL3]
Length = 276
Score = 91.9 bits (226), Expect = 1e-16, Method: Composition-based stats.
Identities = 27/250 (10%), Positives = 66/250 (26%), Gaps = 4/250 (1%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIY---NEDYHSSKYKKIEEPVV 62
+ S+ LH + L + +F+ + P + V + E + + P
Sbjct: 7 AILGSIALHAGVVALAFVSFSHKADEPKPLVNSVPVTIVSETVIEAAAADNPQPEPSPDD 66
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
+ T + +
Sbjct: 67 AATAPVSAPEEPTPPAPQPTPPPPTPTPAPPRPTPRPTPTPPRPTPPRPSPPTPEKARPT 126
Query: 123 YDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIV 182
+ S ++ + + S + + +
Sbjct: 127 PPRPTPPTPARPAPKRNEPSLDLDALAGPTRPNNNRGRPATGQQGSGTASQATGPQVTAI 186
Query: 183 RNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKA 242
N+V NW +P D +LR+++ L+ G + ++ + V R + A +A
Sbjct: 187 FNQVYPNWVLPCDIPGADQLRIQVELTLSADGRITRGPSLINPQ-SSSVYRAAADGALRA 245
Query: 243 VIKSQAFRLS 252
+ ++ F +
Sbjct: 246 LRQTAPFDVP 255
>gi|56697942|ref|YP_168313.1| TonB domain-containing protein [Ruegeria pomeroyi DSS-3]
gi|56679679|gb|AAV96345.1| tonB domain protein, putative [Ruegeria pomeroyi DSS-3]
Length = 380
Score = 91.5 bits (225), Expect = 1e-16, Method: Composition-based stats.
Identities = 35/235 (14%), Positives = 73/235 (31%), Gaps = 4/235 (1%)
Query: 41 VDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKR 100
V+ + E + +PV S++E Q + +
Sbjct: 143 VERVAPEPVAAPPPDARPDPVETPPVSAEEGAEAPQPEQPATAPEEATDRIEPETDPQAD 202
Query: 101 SSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKE 160
+ S+ + + K + G + + +++ + +
Sbjct: 203 VAPSRSPRPKTRPQQPTQTAETKPEAKPEAKPEAKPATGGQTDDSRNAVNEALAQALAAS 262
Query: 161 LLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGF--VLG 218
+ + +R V WN+ S + V + ++N G +
Sbjct: 263 EEPAAAPAPSGPPLTSGEKESLRVAVSQCWNVGSLSSEALRTTVVVSVRMNADGTPDIGS 322
Query: 219 KINVDVVGGTELVRRMLRENARKAVIKSQA--FRLSPSTYKSWRNITLFFVPSKM 271
D GG+ + E AR+A+I+ A + L Y WR+I + F P +M
Sbjct: 323 IRLTDSSGGSTGAAKQAYEAARRAIIRCGAKGYNLPSEKYDHWRDIEMTFNPERM 377
>gi|77464241|ref|YP_353745.1| hypothetical protein RSP_0670 [Rhodobacter sphaeroides 2.4.1]
gi|77388659|gb|ABA79844.1| Possible TolA protein [Rhodobacter sphaeroides 2.4.1]
Length = 415
Score = 91.1 bits (224), Expect = 1e-16, Method: Composition-based stats.
Identities = 35/232 (15%), Positives = 70/232 (30%), Gaps = 7/232 (3%)
Query: 47 EDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQT--KTHATENETKRSSSS 104
D + +K+EE + +V + + E + + + + + +
Sbjct: 181 PDAETPAEEKVEEKPPAAPEEATTEIVTEATETEEVAQLAPTSSMRPKVRPQRARAPEPA 240
Query: 105 KGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSK 164
+ E S + Q + + ++ + ++
Sbjct: 241 EEEPTPASSRTETAEKPADKPAEKPAEKPAAQKPRKDEASIDAALAEAMGGGEEPAAEKP 300
Query: 165 VEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVL--GKINV 222
+ + R V WN+ + V + L+Q G +
Sbjct: 301 ASPARSGPPVTSGEKDAFRVAVQQCWNVGALSSDALSTTVTVAMSLSQDGKPDAGSIRMI 360
Query: 223 DVVGGTELVRRMLRENARKAVIKSQAFRLS---PSTYKSWRNITLFFVPSKM 271
+ GGT+ R E AR+A+I A P Y WR + + F PS M
Sbjct: 361 ESSGGTDAGARQAFEAARRAIILCGALGFPLPXPEKYDQWREVEMVFDPSGM 412
>gi|78048791|ref|YP_364966.1| TonB-like protein [Xanthomonas campestris pv. vesicatoria str.
85-10]
gi|78037221|emb|CAJ24966.1| TonB-like protein [Xanthomonas campestris pv. vesicatoria str.
85-10]
Length = 291
Score = 90.7 bits (223), Expect = 2e-16, Method: Composition-based stats.
Identities = 39/259 (15%), Positives = 80/259 (30%), Gaps = 17/259 (6%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP- 60
RL L IS++LH + +L + F + + + + S + + + +
Sbjct: 16 RLMMTLVISLLLHGVLILGVGFAVSEDAPLVPTLDVIFSQTSTPLTPKQADFLAQANQQG 75
Query: 61 -----VVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESAL 115
Q SQ +V + +T+ +S +GEQA+
Sbjct: 76 GGDYATAQRPRDSQPGVVPQDRTGLAPQAQRATSVNAPEPTQTRVVTSRRGEQAVPTPQP 135
Query: 116 LRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPS 175
+ + AE + ++ +S +
Sbjct: 136 NPQTDPLTPAE---AQRIQRDAEMARLAAEVHLRSEQYAKRPNRKFVSASTREYAYANYL 192
Query: 176 QDAIAIVRNRVIANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRM 234
+ + R + N N P D +R + +V + + + G V + G +
Sbjct: 193 RAWVD--RAERVGNLNYPDDARRRRLGGKVVISVGVRRDGSVESSRVLVSSG-----VPL 245
Query: 235 LRENARKAVIKSQAFRLSP 253
L + A + V +Q F P
Sbjct: 246 LDDAALRVVQLAQPFPPLP 264
>gi|325927547|ref|ZP_08188783.1| outer membrane transport energization protein TonB (TC 2.C.1.1.1)
[Xanthomonas perforans 91-118]
gi|325542086|gb|EGD13592.1| outer membrane transport energization protein TonB (TC 2.C.1.1.1)
[Xanthomonas perforans 91-118]
Length = 291
Score = 90.7 bits (223), Expect = 2e-16, Method: Composition-based stats.
Identities = 39/259 (15%), Positives = 80/259 (30%), Gaps = 17/259 (6%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP- 60
RL L IS++LH + +L + F + + + + S + + + +
Sbjct: 16 RLMMTLVISLLLHGVLILGVGFAVSEDAPLVPTLDVIFSQTSTPLTPKQADFLAQANQQG 75
Query: 61 -----VVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESAL 115
Q SQ +V + +T+ +S +GEQA+
Sbjct: 76 GGDHATAQRPRDSQPGVVPQDRTGLAPQAQRATSVNAPEPTQTRVVTSRRGEQAVPTPQP 135
Query: 116 LRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPS 175
+ + AE + ++ +S +
Sbjct: 136 NPQTDPLTPAE---AQRIQRDAEMARLAAEVHLRSEQYAKRPNRKFVSASTREYAYANYL 192
Query: 176 QDAIAIVRNRVIANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRM 234
+ + R + N N P D +R + +V + + + G V + G +
Sbjct: 193 RAWVD--RAERVGNLNYPDDARRRRLGGKVVISVGVRRDGSVESSRVLVSSG-----VPL 245
Query: 235 LRENARKAVIKSQAFRLSP 253
L + A + V +Q F P
Sbjct: 246 LDDAALRVVQLAQPFPPLP 264
>gi|85860620|ref|YP_462822.1| tonB protein [Syntrophus aciditrophicus SB]
gi|85723711|gb|ABC78654.1| tonB protein [Syntrophus aciditrophicus SB]
Length = 280
Score = 90.7 bits (223), Expect = 2e-16, Method: Composition-based stats.
Identities = 41/254 (16%), Positives = 85/254 (33%), Gaps = 6/254 (2%)
Query: 1 MRLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP 60
+RL G+ +S+ +H+ + F P + R +L+++ K+ E
Sbjct: 17 IRLHKGMLLSLAIHIFCVASTLFFMTFSAQHPETVRVLLTLEPPGGGGGGEINQMKVPEK 76
Query: 61 VVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPV 120
V + Q + + Q N F + E+ + + S L +
Sbjct: 77 KVPSPPARQTHRREHPTRQLNTADFPPVMERTPVESMPDVPPILTEKPVEEMSPLANIAA 136
Query: 121 SPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIA 180
K L + + D+ S+ S K Q+ A
Sbjct: 137 PVMAASGGGKGAGSGSGLGSGTGTGSGTGIGSGAGRDEGSGQSRDSLESLKTRYLQEHFA 196
Query: 181 IVRNRVIANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENA 239
+R+ ++ N P ++ + +V++ F + + G V V+ G +L +N
Sbjct: 197 YIRDLIMNNLTYPPMARKVGWQGKVRVSFVIRKDGRVEALKVVESSGHG-----ILDKNV 251
Query: 240 RKAVIKSQAFRLSP 253
+ + + Q F P
Sbjct: 252 VETIRQVQPFPKPP 265
>gi|21243831|ref|NP_643413.1| TonB protein [Xanthomonas axonopodis pv. citri str. 306]
gi|21109428|gb|AAM37949.1| TonB protein [Xanthomonas axonopodis pv. citri str. 306]
Length = 291
Score = 90.3 bits (222), Expect = 3e-16, Method: Composition-based stats.
Identities = 40/261 (15%), Positives = 81/261 (31%), Gaps = 17/261 (6%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP- 60
RL L IS++LH + +L + F + + + + S + + + +
Sbjct: 16 RLMMTLVISLLLHGVLILGVGFAVSEDAPLVPTLDVIFSQTSTPLTPKQADFLAQANQQG 75
Query: 61 -----VVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESAL 115
Q SQ +V + +T+ +S +GEQA+
Sbjct: 76 GGDHATAQRPRDSQPGVVPQDRTGLAPQAQRATSVNAPEPTQTRVVTSRRGEQAVPTPQP 135
Query: 116 LRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPS 175
+ + AE + ++ +S +
Sbjct: 136 NPQTDPLTPAE---AQRIQRDAEMARLAAEVHLRSEQYAKRPNRKFVSASTREYAYANYL 192
Query: 176 QDAIAIVRNRVIANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRM 234
+ + R + N N P D +R + +V + + + G V + G +
Sbjct: 193 RAWVD--RAERVGNLNYPDDARRRRLGGKVVISVGVRRDGSVESSRVLVSSG-----VPL 245
Query: 235 LRENARKAVIKSQAFRLSPST 255
L + A + V +Q F P T
Sbjct: 246 LDDAALRVVQLAQPFPPLPKT 266
>gi|316935139|ref|YP_004110121.1| hypothetical protein Rpdx1_3823 [Rhodopseudomonas palustris DX-1]
gi|315602853|gb|ADU45388.1| hypothetical protein Rpdx1_3823 [Rhodopseudomonas palustris DX-1]
Length = 286
Score = 90.0 bits (221), Expect = 3e-16, Method: Composition-based stats.
Identities = 34/271 (12%), Positives = 88/271 (32%), Gaps = 6/271 (2%)
Query: 4 ENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQ 63
G A+S++ HV+ + + V + + + V+ + ++ +K +
Sbjct: 15 RAGAAVSVLAHVVLVGAVLLLAEVHPFAEVPEQR-IEVEVVTADEAPPPVPEKEPDQKPD 73
Query: 64 FKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPY 123
+ + + + + Q + + + E + + Q ++ P
Sbjct: 74 EQQAPTFEVPQTPAEQPKPQQQAPAAQQQPAETKPPPPAPQPPPQQNAQAPAPPPQQQPA 133
Query: 124 DKQKISKATNKEQDLQGISFAEKKSIDTVVVRPD---KKELLSKVEKSSRKRIPSQDAIA 180
+Q+ A + ++ TV E + S +A+A
Sbjct: 134 PQQQPQPAKPAAAPMPFPPAIPQEPDITVKYSVALGLPAEGGGFDAPAETVANISAEAVA 193
Query: 181 IVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENAR 240
+R R+ + +P+ +++ + L G + + + + L A
Sbjct: 194 ALRKRLRSCAALPAGLSPADNVKIVIRVGLTPDGRLAQEPFLIEASASAK-GPALMRGAI 252
Query: 241 KAVIKSQAFRL-SPSTYKSWRNITLFFVPSK 270
A+ Q + + Y+ WR + + F P
Sbjct: 253 AALEACQPYTMLPADKYREWRVLDIGFTPQD 283
>gi|160871963|ref|ZP_02062095.1| proline-rich region [Rickettsiella grylli]
gi|159120762|gb|EDP46100.1| proline-rich region [Rickettsiella grylli]
Length = 269
Score = 90.0 bits (221), Expect = 3e-16, Method: Composition-based stats.
Identities = 42/269 (15%), Positives = 95/269 (35%), Gaps = 16/269 (5%)
Query: 10 SMILHVMFLLLLYFNFNVQLLVPISRREMLS------VDNIYNEDYHSSKYKKIEEPVVQ 63
+++LH + L L+ + + + + +KI+ P
Sbjct: 3 ALLLHFVLFLALFLTVRHHTTLVSLSSPAVQWIHATAIPMDTLVKKKTPPVEKIKIPTEV 62
Query: 64 FKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPY 123
K S ++ ++++ + K + + +S ++ +Q+L + + +
Sbjct: 63 PKPSEVTKPLKSELIKKSPVVLPLEKKKVHKNEQKQITSHTRNKQSLLIKKRMHLKTTKI 122
Query: 124 DKQKISKATNKE-QDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIV 182
+K+ + K Q + S + ++ + K L + +SR ++
Sbjct: 123 EKKIMHKPKKMTHQPISKKSLKLVEKNVQQLLDQELKTLEKQSIHTSRYAATMGKYRHLI 182
Query: 183 RNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKA 242
+ W IP + K L ++ L G VL I V G +L +A+ A
Sbjct: 183 LQAIAQQWIIPPEM--NKHLETQLTVHLAPGGLVLDVIIVKSSGN-----LILDRSAQTA 235
Query: 243 VIKSQAFRLSP--STYKSWRNITLFFVPS 269
V K+ + + ++R+I L P
Sbjct: 236 VYKASPLPVPKNEDLFHTFRHINLIVRPE 264
>gi|190575535|ref|YP_001973380.1| putative TonB-like domain-containing protein [Stenotrophomonas
maltophilia K279a]
gi|190013457|emb|CAQ47092.1| putative TonB-like domain protein [Stenotrophomonas maltophilia
K279a]
Length = 294
Score = 90.0 bits (221), Expect = 3e-16, Method: Composition-based stats.
Identities = 38/264 (14%), Positives = 89/264 (33%), Gaps = 15/264 (5%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEE-- 59
RL +A+S+++H + +L + F + + + S + +
Sbjct: 17 RLGATIALSVLVHALLILGVGFAVKGDAPLVPTLEVIFSQTRTALTPKQADFLAAANQEG 76
Query: 60 ----PVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESAL 115
Q +Q +V + Q+ + + SS GE+ + ++
Sbjct: 77 GGEHDRAQRPRDNQAGIVPQAQSGISPAPQQQQSAAPVPPPQARVVSSRNGEEVVAQAQS 136
Query: 116 LRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPS 175
P P +S ++ ++ ++ RP++K + + + +
Sbjct: 137 RPTPDQPEPDAPLSAREQRDVEMARLAAEVHLRSAQYAKRPNRKFVSASTREYAYANYL- 195
Query: 176 QDAIAIVRNRVIANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRM 234
+ + R + N N P + ++ + +V + + + G V + G +
Sbjct: 196 RAWVD--RAEKVGNLNYPDEARQRRLGGQVVISVGVRRDGSVESSRILRSSGT-----PL 248
Query: 235 LRENARKAVIKSQAFRLSPSTYKS 258
L E A + V +Q F P T
Sbjct: 249 LDEAALRVVQLAQPFPPLPKTEDE 272
>gi|209550778|ref|YP_002282695.1| outer membrane protein [Rhizobium leguminosarum bv. trifolii
WSM2304]
gi|209536534|gb|ACI56469.1| outer membrane protein [Rhizobium leguminosarum bv. trifolii
WSM2304]
Length = 381
Score = 89.6 bits (220), Expect = 4e-16, Method: Composition-based stats.
Identities = 38/249 (15%), Positives = 78/249 (31%), Gaps = 8/249 (3%)
Query: 28 QLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSD 87
Q S V+ + ++ + + V + + +
Sbjct: 134 QPKEVASIPPPKPVEVTPPKPEEKPPEEQAKPEEPPKPDAEALPDNVPTPVAKPQVKPPE 193
Query: 88 QTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKK 147
K E + + + + N + + K
Sbjct: 194 PQKPAEKPPEKTPDQPKTADTPTDKKKADKKQEVAKSASSMKSDFNADD---ISALLNKT 250
Query: 148 SIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMH 207
+ +E +KS+ SQ ++ + NW + + + +K+H
Sbjct: 251 DPSAGGAKRSTQEASLGAKKSNNGSKLSQSEEDALKGLIEGNWLVTPGMEGVSGMVIKVH 310
Query: 208 FQLNQKGFVLGKINVD--VVGGTELVRRMLRENARKAVIKSQA---FRLSPSTYKSWRNI 262
F+L++ G ++G+ ++ T+ RR L A +AV+KS + L Y W +
Sbjct: 311 FKLDKDGNIIGQPEIESSGGSSTDSTRRALESGAYRAVMKSASSFRTTLPMDKYDVWNEV 370
Query: 263 TLFFVPSKM 271
L F PS M
Sbjct: 371 VLNFNPSDM 379
Score = 50.7 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/180 (13%), Positives = 57/180 (31%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
++ + S +LH + L + + + E + VD + E + + P
Sbjct: 1 MKTSVVTSAVLHCLVLTWAMVSLSAPESFKVEDFEAMPVDLVPVESITQMQQGDKKAPKK 60
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
+ EN + KT N +S + + ++ P
Sbjct: 61 ETSAPVPTTRPPIAQPAENAGDNNVDLKTPPVPNAKPSNSEAAAANSSEKPLPKTDPKPN 120
Query: 123 YDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIV 182
K + + T EQ + S K ++ +P++K + + + ++ V
Sbjct: 121 DVKDIVKEETEVEQPKEVASIPPPKPVEVTPPKPEEKPPEEQAKPEEPPKPDAEALPDNV 180
>gi|260467064|ref|ZP_05813244.1| TonB family protein [Mesorhizobium opportunistum WSM2075]
gi|259029173|gb|EEW30469.1| TonB family protein [Mesorhizobium opportunistum WSM2075]
Length = 385
Score = 89.6 bits (220), Expect = 4e-16, Method: Composition-based stats.
Identities = 33/246 (13%), Positives = 79/246 (32%), Gaps = 6/246 (2%)
Query: 28 QLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSD 87
Q + + V+ + ++ + ++ ++
Sbjct: 141 QPKEEVKPEPVKQVEPKPTPAKPAPTPPPQDKTAAIDPTPEVKPDAVAEAIAKDPPTEET 200
Query: 88 QTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKK 147
Q + A E + ++ K + K+ +K+ + IS K
Sbjct: 201 QLPSSAPAPEARPKPQPAQAESAKAPDRKDADKPVKEASSKPKSDDKQFNADEISALLDK 260
Query: 148 SIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMH 207
+ + S + + S+ + +++ W +P+ + + V +
Sbjct: 261 QKPSGGGAKRSTQQASLGGDKDQGQKLSKSEQGALESQLGGCWTLPAGLEGSESFVVVVR 320
Query: 208 FQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKS--QAFRLSPSTYKSWRNITLF 265
F L+ G + G+ +V+ G R E+A +AV K ++ W +I +
Sbjct: 321 FNLDNSGKLDGRPSVEKSSGN----RQFDESAVRAVQKCDVAGLQVPAGKQDIWNDIRVT 376
Query: 266 FVPSKM 271
F P +M
Sbjct: 377 FDPREM 382
Score = 48.7 bits (114), Expect = 7e-04, Method: Composition-based stats.
Identities = 20/174 (11%), Positives = 49/174 (28%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
++ GL S+ILH L F + +P + E ++VD + E + + +
Sbjct: 1 MKTGLTTSVILHTAVLAFGLFTLSAPAALPSADVESVAVDIVPMEAIAQTLQGDKKAVMH 60
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
+ + S T T + + +
Sbjct: 61 EKPAPLPTQRPDIVPDAQKVGENSVDTDKPITPEAKPKPVDTTSAPPPAPTPKEAPKTED 120
Query: 123 YDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQ 176
K + ++ +++ V + + K +K + + +
Sbjct: 121 VPKPQEKPKPIPATEVAPAPQPKEEVKPEPVKQVEPKPTPAKPAPTPPPQDKTA 174
>gi|146276613|ref|YP_001166772.1| hypothetical protein Rsph17025_0561 [Rhodobacter sphaeroides ATCC
17025]
gi|145554854|gb|ABP69467.1| hypothetical protein Rsph17025_0561 [Rhodobacter sphaeroides ATCC
17025]
Length = 416
Score = 89.6 bits (220), Expect = 5e-16, Method: Composition-based stats.
Identities = 35/235 (14%), Positives = 71/235 (30%), Gaps = 7/235 (2%)
Query: 44 IYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSS 103
+ + + E+P + ++ E + +E + + R+
Sbjct: 179 VAPDPQTPAPEVVEEKPPAAPEEATTEIVTEATETEEVAQLAPTSSARPKVRPQRARAPE 238
Query: 104 SKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLS 163
E+ S + + ++ + + D + +
Sbjct: 239 PAAEEPRPASTSRTETAAAEPAETPAERPERPAAETPRQNDNRAVEDALAEALGGGTEPA 298
Query: 164 KVEKSSR---KRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVL--G 218
S+ + R V WN+ + V + + Q G
Sbjct: 299 SERPSAPARSGPPVTSGEKDAFRIAVQQCWNVGALSTEALATTVTVAMTMAQDGKPDAGS 358
Query: 219 KINVDVVGGTELVRRMLRENARKAVIKSQA--FRLSPSTYKSWRNITLFFVPSKM 271
++ GGT+ R E AR+A+I+ A F L P Y WR + + F P+ M
Sbjct: 359 IRMIESRGGTDAGARQAFEAARRAIIRCGARGFPLPPEKYDQWREVEMEFDPNGM 413
Score = 39.1 bits (89), Expect = 0.63, Method: Composition-based stats.
Identities = 15/146 (10%), Positives = 39/146 (26%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
++ G+ IS I H +L L F + SV + + ++ + +
Sbjct: 1 MDKGVIISGIGHFSLILWLLFGDWFFQPQHAPEVAVTSVSLMTSAEFDAMTSAATQPSDQ 60
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
+ S + + + + +A PV
Sbjct: 61 RPTPSVEPEQPAPPPEEAAPAPAPAPVAETPPPLAPEPRPEPAPQPDAAPTAPEIAPVPE 120
Query: 123 YDKQKISKATNKEQDLQGISFAEKKS 148
+ + + +++ + S
Sbjct: 121 PEIAEAPEPLAPVAEVEQPILVPQSS 146
>gi|259417935|ref|ZP_05741854.1| possible TolA protein [Silicibacter sp. TrichCH4B]
gi|259346841|gb|EEW58655.1| possible TolA protein [Silicibacter sp. TrichCH4B]
Length = 379
Score = 89.2 bits (219), Expect = 6e-16, Method: Composition-based stats.
Identities = 37/248 (14%), Positives = 75/248 (30%), Gaps = 10/248 (4%)
Query: 34 SRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRD------FSVQENGDRFSD 87
+ + D + + + EP Q QE + D VQE +
Sbjct: 129 DLPQTAEPETAQQTDRVAPEPVRPPEPDTQISDVVQEEVAPDAGAEANQPVQEATAPEAA 188
Query: 88 QTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKK 147
+ ++ + R P + + + + + +
Sbjct: 189 SDRIVTEAEADDAEPTAPLASVRPRTRPNRPQPQPEAETQTAAREEETTPSPEPNPEVES 248
Query: 148 SIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMH 207
S + ++ +R V WN+ S + V +
Sbjct: 249 SAVDDALAEALAGSGEVEAPEPSGPPMTRGEKDALRVAVSQCWNVGSLSSEALRTSVVVG 308
Query: 208 FQLNQKGF--VLGKINVDVVGGTELVRRMLRENARKAVIKSQA--FRLSPSTYKSWRNIT 263
L+++G + + GG++ + E AR+A+I+ + F L Y WR+I
Sbjct: 309 VTLSREGMPDIGSIRMLSSSGGSDSSAKQAYEAARRAIIRCGSRGFDLPADKYAQWRDIE 368
Query: 264 LFFVPSKM 271
+ F P M
Sbjct: 369 MTFNPEGM 376
Score = 39.5 bits (90), Expect = 0.51, Method: Composition-based stats.
Identities = 22/179 (12%), Positives = 46/179 (25%), Gaps = 2/179 (1%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
++ G IS+ H + + L + V I E++ ++ V
Sbjct: 1 MQTGTKISVAGHGLLITWALVG--GWLNPEPLPFQSQDVSIISAEEFARLSEQQAAPEVA 58
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
+ QE V + + E S ++ E E + P
Sbjct: 59 DEPVAPQEPAVTESTPAIPERPTPTPEPPVQPEPIETPSEDAEAEPPAPEPVPEVPSIIP 118
Query: 123 YDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAI 181
T+ Q + + + + VRP + + +
Sbjct: 119 DAPDVPEIVTDLPQTAEPETAQQTDRVAPEPVRPPEPDTQISDVVQEEVAPDAGAEANQ 177
>gi|114765732|ref|ZP_01444830.1| Possible TolA protein [Pelagibaca bermudensis HTCC2601]
gi|114541949|gb|EAU44984.1| Possible TolA protein [Roseovarius sp. HTCC2601]
Length = 379
Score = 89.2 bits (219), Expect = 6e-16, Method: Composition-based stats.
Identities = 29/250 (11%), Positives = 63/250 (25%), Gaps = 10/250 (4%)
Query: 26 NVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRF 85
V P E ++ D ++ + E + E
Sbjct: 133 PVPRPAPRVAPEPVA---PSEPDVTEAEEVQEAAQEEADSPDVAEEAQEATAPPETATEI 189
Query: 86 SDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAE 145
+ + A+ + P A E + +
Sbjct: 190 VTEAEEPASAPPASVRPRPRPRDIATAQPTPEPEPEPQPAPATPSAPEAEPEPAPSQSTD 249
Query: 146 KKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVK 205
+ + ++ +R V W + + V
Sbjct: 250 SAVDAAIAEALGGGAPTQSDTPA--GPPLTRGEQDALRIAVQRCWIVDVG-SEAASVTVT 306
Query: 206 MHFQLNQKGFVLGK--INVDVVGGTELVRRMLRENARKAVIKSQ--AFRLSPSTYKSWRN 261
+ ++ G V+ + GG+ + AR+A+++ Q ++L Y W+
Sbjct: 307 VGMEMEPSGRVVSSSLRLIGSEGGSASAADTAFQAARRAILRCQGDGYQLPQDKYDQWKQ 366
Query: 262 ITLFFVPSKM 271
I + F P M
Sbjct: 367 IEMTFNPDDM 376
>gi|75676902|ref|YP_319323.1| hypothetical protein Nwi_2718 [Nitrobacter winogradskyi Nb-255]
gi|74421772|gb|ABA05971.1| Cell division and transport-associated protein TolA [Nitrobacter
winogradskyi Nb-255]
Length = 350
Score = 89.2 bits (219), Expect = 6e-16, Method: Composition-based stats.
Identities = 18/142 (12%), Positives = 45/142 (31%), Gaps = 1/142 (0%)
Query: 130 KATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIAN 189
++ ++ V + + S ++ +++V
Sbjct: 210 AERVFDRSKIAALLDKRDPSRHSVAGDTLNANAALGLAHGKAADNSATWGSMFKSQVERC 269
Query: 190 WNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAF 249
W P + +L + G + T R+ +E+A +A+I+ Q +
Sbjct: 270 WKKPYGGLEAQMTEAIFSIKLKRDGTLEATPTAISN-PTTPYFRVYQESALRAIIECQPY 328
Query: 250 RLSPSTYKSWRNITLFFVPSKM 271
+L + + W+ F K+
Sbjct: 329 KLPAAYFDEWKFFEPVFTERKL 350
Score = 58.4 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 19/106 (17%), Positives = 41/106 (38%), Gaps = 5/106 (4%)
Query: 1 MRLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYH----SSKYKK 56
++++ LA S+ LHV+ + +F+ + + E L VD I + K K
Sbjct: 3 VKVDKTLAASVALHVLVIGWGLVSFSSKAFESVPE-ESLPVDIISADQLTHVTAGMKTGK 61
Query: 57 IEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSS 102
E P + ++ + +V + ++ A + + K
Sbjct: 62 KENPKPLVEKVAEPTPPPEDTVGKIDEKKPPVVTDVAPKEQPKPDD 107
>gi|304312900|ref|YP_003812498.1| TolA protein [gamma proteobacterium HdN1]
gi|301798633|emb|CBL46865.1| TolA protein [gamma proteobacterium HdN1]
Length = 270
Score = 88.8 bits (218), Expect = 6e-16, Method: Composition-based stats.
Identities = 34/271 (12%), Positives = 78/271 (28%), Gaps = 14/271 (5%)
Query: 4 ENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQ 63
LA S+ +H++ L + ++ I + + + K + P+ +
Sbjct: 9 YRALAKSVAVHLLVLGISLASWKWTEDRVIQVPGHVKAVVVTRGELAE-KAAEKPRPLPK 67
Query: 64 FKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPY 123
+ + + + + + + + V P
Sbjct: 68 KPVAEPKKPEPKKAEPPKPAPPKPKPEPPKPTPPKPAPTPKPVPKKAEVKKPEPKKVEPV 127
Query: 124 DKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVR 183
K S + +D + K + +S +A +R
Sbjct: 128 KPAPKKPEPRKPAPSHDYSDLIDEELDVLAKPSKKPVQSASSASTSP---VVDKYMAGIR 184
Query: 184 NRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAV 243
+ + W+ P + ++V + L G + V G +A AV
Sbjct: 185 SDIERRWSRPPLAR--NGMQVTLRLFLIPGGELSDVQVVQSSGN-----IAFDRSALAAV 237
Query: 244 IKSQAFRLS--PSTYKS-WRNITLFFVPSKM 271
K+ F + P+ + +R T+ F P +
Sbjct: 238 QKAGRFVVPSDPAEFDRNFRQFTVLFNPDDL 268
>gi|13473331|ref|NP_104898.1| hypothetical protein mll3889 [Mesorhizobium loti MAFF303099]
gi|14024080|dbj|BAB50684.1| mll3889 [Mesorhizobium loti MAFF303099]
Length = 385
Score = 88.8 bits (218), Expect = 7e-16, Method: Composition-based stats.
Identities = 30/249 (12%), Positives = 73/249 (29%), Gaps = 7/249 (2%)
Query: 26 NVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRF 85
+ E + + ++ + +
Sbjct: 138 PAPTPKEEVKPEPVKQTEPKPTPAKPAPTPPPQDKTAAIDPTPEVKPDAVAEAIAKDPPA 197
Query: 86 SDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP-YDKQKISKATNKEQDLQGISFA 144
+ + R + ++ + P + K+ +K+ + IS
Sbjct: 198 EETQLPSSAPAPEARPKPQPAQAESAKAPERKDAEKPVKEASSKPKSDDKQFNANEISAL 257
Query: 145 EKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRV 204
K + + S + + S+ + +++ W +P + + V
Sbjct: 258 LDKQKPSGGGAKRSTQQASLGGDKDQGQKLSKSEQGALESQLGGCWTLPVGLEGSENFVV 317
Query: 205 KMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKS--QAFRLSPSTYKSWRNI 262
+ F L+ G + G+ +V+ G R E+A +AV K ++ W +I
Sbjct: 318 VVRFNLDNSGKLDGRPSVEKSSGN----RQFDESAVRAVQKCDVAGLQVPAGKQDIWNDI 373
Query: 263 TLFFVPSKM 271
+ F P +M
Sbjct: 374 RVTFDPREM 382
Score = 48.4 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 24/175 (13%), Positives = 50/175 (28%), Gaps = 1/175 (0%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
++ GL S+ILH L F + +P + E ++VD + E + + +
Sbjct: 1 MKTGLTTSVILHTAVLAFGLFTLSAPAALPSADVESVAVDIVPMEAIAQTLQGDKKAVMH 60
Query: 63 QFKGS-SQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVS 121
+ + + Q+ G+ D K E + K +
Sbjct: 61 EKPAPLPTQRPDIVPASQKVGENSVDTDKPITPEAKPKPVDMTSAPPPAPTPKETPKTED 120
Query: 122 PYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQ 176
Q+ K + + E+ + V K + +
Sbjct: 121 VPKPQEKPKPIPATEVAPAPTPKEEVKPEPVKQTEPKPTPAKPAPTPPPQDKTAA 175
>gi|254521251|ref|ZP_05133306.1| TonB protein [Stenotrophomonas sp. SKA14]
gi|219718842|gb|EED37367.1| TonB protein [Stenotrophomonas sp. SKA14]
Length = 294
Score = 88.4 bits (217), Expect = 9e-16, Method: Composition-based stats.
Identities = 38/264 (14%), Positives = 89/264 (33%), Gaps = 15/264 (5%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEE-- 59
RL +A+S+++H + +L + F + + + S + +
Sbjct: 17 RLGATIALSVVVHALLILGVGFAVKGDAPLVPTLEVIFSQTRTALTPKQADFLAAASQEG 76
Query: 60 ----PVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESAL 115
Q +Q +V + Q+ A + + SS G+ + ++
Sbjct: 77 GGEHDRAQRPRDNQAGIVPQAQAGVSPVPQQQQSAAPAPPPQARVVSSRNGQDTVAQAQA 136
Query: 116 LRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPS 175
P P +S ++ ++ ++ RP++K + + + +
Sbjct: 137 RPTPEQPEPDAPLSAREQRDVEMARLAAEVHLRSAQYAKRPNRKFVSASTREYAYANYL- 195
Query: 176 QDAIAIVRNRVIANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRM 234
+ + R + N N P + ++ + +V + + + G V + G +
Sbjct: 196 RAWVD--RAERVGNLNYPDEARQRRLGGQVVISVGVRRDGSVESSRILRSSGT-----PL 248
Query: 235 LRENARKAVIKSQAFRLSPSTYKS 258
L E A + V +Q F P T
Sbjct: 249 LDEAALRVVKLAQPFPPLPKTEDE 272
>gi|99082206|ref|YP_614360.1| TonB domain-containing protein [Ruegeria sp. TM1040]
gi|99038486|gb|ABF65098.1| TonB domain protein putative [Ruegeria sp. TM1040]
Length = 383
Score = 88.4 bits (217), Expect = 1e-15, Method: Composition-based stats.
Identities = 38/260 (14%), Positives = 75/260 (28%), Gaps = 14/260 (5%)
Query: 26 NVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRF 85
+ + D + + + EP Q QE + D + N
Sbjct: 121 PELPEIVTDLPQTAEPQTAQQTDRVAPEPVRAPEPDTQIGDVVQEEVAPDAEAEANQPVQ 180
Query: 86 SDQTKT----------HATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKE 135
A + E +S +A P + + + +
Sbjct: 181 EATAPEAASDRIVTEAEADDAEPTAPLASVRPRARPARPAPEPEPDPEPQTQTAARDEEP 240
Query: 136 QDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSD 195
+ ++S + ++ +R V WN+ S
Sbjct: 241 APDAEQNPEVERSAVNDALAEALSGAGEVEAPEPSGPPMTRGEKDALRIAVSQCWNLGSL 300
Query: 196 FKRFKKLRVKMHFQLNQKG--FVLGKINVDVVGGTELVRRMLRENARKAVIKSQA--FRL 251
V + L+++G + + GG++ + E AR+A+I+ + F L
Sbjct: 301 SSEALLTEVVVGVTLSREGVPDIGSIRLLSSTGGSDSSAKQAYEAARRAIIRCGSRGFDL 360
Query: 252 SPSTYKSWRNITLFFVPSKM 271
Y WR+I + F P M
Sbjct: 361 PADKYAQWRDIEMTFNPEGM 380
Score = 41.0 bits (94), Expect = 0.16, Method: Composition-based stats.
Identities = 18/176 (10%), Positives = 53/176 (30%), Gaps = 4/176 (2%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
++ G IS+ H + + L + V I E++ + V
Sbjct: 1 MQTGTKISLAGHGLLITWALAG--GWLNPEPLPFQSQDVSIISAEEFARLSEQYAAPEVS 58
Query: 63 QFKGSSQENLVRDFSV--QENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPV 120
+ QE + + + E + + T A ++++ + +
Sbjct: 59 DAPEAPQEPAITETTPSIPERPSQTPETPATPAPIETPVADTAAEPPAPEPDPEVPSRVP 118
Query: 121 SPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQ 176
+ +I + + Q ++ + + V ++ V++ ++
Sbjct: 119 DAPELPEIVTDLPQTAEPQTAQQTDRVAPEPVRAPEPDTQIGDVVQEEVAPDAEAE 174
>gi|166712945|ref|ZP_02244152.1| TonB protein [Xanthomonas oryzae pv. oryzicola BLS256]
Length = 291
Score = 88.0 bits (216), Expect = 1e-15, Method: Composition-based stats.
Identities = 40/261 (15%), Positives = 79/261 (30%), Gaps = 17/261 (6%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP- 60
RL L IS++LH + +L + F + + + + S + + + +
Sbjct: 16 RLMMTLVISLLLHGVLILGVVFAVSEDAPLVPTLDVIFSQTSTPLTPKQADFLAQANQQG 75
Query: 61 -----VVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESAL 115
Q SQ +V + +T+ +S +GEQA+
Sbjct: 76 GGNHDTAQRPRDSQPGVVPQERTGLALQAQRATSVNAPAPTQTRVVTSRRGEQAVPTPQP 135
Query: 116 LRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPS 175
+ AE + ++ +S +
Sbjct: 136 NPQTDPLTPAD---AQRLQRDAEMARLAAEVHLRSEQYAKRPNRKFVSASTREYAYANYL 192
Query: 176 QDAIAIVRNRVIANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRM 234
+ + R + N N P D +R + +V + + G V + G +
Sbjct: 193 RAWVD--RAERVGNLNYPDDARRRRLGGKVVISVGVRHDGSVESSRVLVSSG-----VPL 245
Query: 235 LRENARKAVIKSQAFRLSPST 255
L + A + V +Q F P T
Sbjct: 246 LDDAALRVVQLAQPFPPLPKT 266
>gi|148256133|ref|YP_001240718.1| hypothetical protein BBta_4788 [Bradyrhizobium sp. BTAi1]
gi|146408306|gb|ABQ36812.1| hypothetical protein BBta_4788 [Bradyrhizobium sp. BTAi1]
Length = 294
Score = 88.0 bits (216), Expect = 1e-15, Method: Composition-based stats.
Identities = 32/287 (11%), Positives = 82/287 (28%), Gaps = 21/287 (7%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYH------------ 50
+ G+A S++ H++ + + V + + + + VD + ++
Sbjct: 7 IRWGIAASLLAHLLIAGGIVVS-TVVRPYELPKADEVPVDIVDADESQKTPEPPPPSPSP 65
Query: 51 ------SSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSS 104
++ + +E + +
Sbjct: 66 TPDLTLPQPAATPSLAAAAPPPAAPPPQDAKEAAKETPKPPVPPEAPQQPSPVPSSKAET 125
Query: 105 KGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSK 164
K + A + E DL + P +
Sbjct: 126 KPPAKSQSKAADAKSATKPVPAPSPSYVPAEPDLTVKYGVMLGLPAPLAPLPPAGDGSGD 185
Query: 165 VEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDV 224
+ + D +A+ R + + +P+ + VK+ + G + + +
Sbjct: 186 DAGPTATTNLADDLVAVFRRHLKSCARLPATVSPADNVMVKLRVAMTPDGRLAAEPLLIA 245
Query: 225 VGGTELVRRMLRENARKAVIKSQAFRLSP-STYKSWRNITLFFVPSK 270
+ L+++A +A+ Q + + P S Y+ W+ + L F P
Sbjct: 246 GTASVKAL-QLKQSAMEALAACQPYAMLPSSRYREWKVLELSFSPQD 291
>gi|225677304|ref|ZP_03788283.1| hypothetical protein WUni_008080 [Wolbachia endosymbiont of
Muscidifurax uniraptor]
gi|225590667|gb|EEH11915.1| hypothetical protein WUni_008080 [Wolbachia endosymbiont of
Muscidifurax uniraptor]
Length = 206
Score = 88.0 bits (216), Expect = 1e-15, Method: Composition-based stats.
Identities = 30/182 (16%), Positives = 63/182 (34%), Gaps = 2/182 (1%)
Query: 87 DQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEK 146
TK + K E + ++ I + + + +
Sbjct: 23 PSTKAQTNDTSVVPIPQRKKELVEHTVVAQPRQIIEMQEEVIINEGKEFIPIPKRKKSVE 82
Query: 147 KSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKM 206
K + V + K +S + + + I +R+++ W+IP + +K+
Sbjct: 83 KKLRRDVRGAKNEIGNEKSVESKKDELVVTEIINSIRDKLTKCWSIPESIAYKENFNIKI 142
Query: 207 HFQLNQKGFVLGKINVDVVGG-TELVRRMLRENARKAVIKSQAFR-LSPSTYKSWRNITL 264
+ L+ +G ++ D + R + +NA +AV K L + WR +TL
Sbjct: 143 NLLLSSQGEIIMADVADSDSYRNNPLFRSIADNAMRAVYKCSPLTGLPTQHHHIWREVTL 202
Query: 265 FF 266
F
Sbjct: 203 DF 204
>gi|301058331|ref|ZP_07199364.1| TonB family C-terminal domain protein [delta proteobacterium
NaphS2]
gi|300447567|gb|EFK11299.1| TonB family C-terminal domain protein [delta proteobacterium
NaphS2]
Length = 282
Score = 88.0 bits (216), Expect = 1e-15, Method: Composition-based stats.
Identities = 38/269 (14%), Positives = 84/269 (31%), Gaps = 15/269 (5%)
Query: 7 LAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKG 66
+ +S+ LHV L LL F + V+ + + K VQ K
Sbjct: 22 ILLSLFLHVGVLSLLLFA-PDPFATRKISGPVYEVNLVTLP----AAKPKAAAKTVQPKR 76
Query: 67 SSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQ 126
+ + +V + + + + + + ++ S Q
Sbjct: 77 VTTKVPASTKAVATKRISTPPKPEKPVSIAKRTVERKKPVAKKPPKPKKPKVSPSKLIDQ 136
Query: 127 KISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRV 186
++K + + K+I + + ++ E + V R+
Sbjct: 137 AVAKIKRNVNTEKKVDQHLDKAISNIQNQVNRAEAAGAGGPPMEGIAI-RIYQMEVEERI 195
Query: 187 IANWNIPSDF---KRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAV 243
+NW P + K L + ++ + G +L ++ G + + KAV
Sbjct: 196 KSNWQYPVALTSPSKLKDLVATVVVRVQRDGTILRSWFIERSGNA-----IYDASVMKAV 250
Query: 244 IKSQAFRLSPSTYKSWR-NITLFFVPSKM 271
+S P Y + + + F S++
Sbjct: 251 ERSNPLPPFPEGYNRNQDEMEIRFNLSEL 279
>gi|58696706|ref|ZP_00372254.1| conserved hypothetical protein [Wolbachia endosymbiont of
Drosophila simulans]
gi|225630038|ref|YP_002726829.1| hypothetical protein WRi_002060 [Wolbachia sp. wRi]
gi|58537118|gb|EAL60232.1| conserved hypothetical protein [Wolbachia endosymbiont of
Drosophila simulans]
gi|225592019|gb|ACN95038.1| hypothetical protein WRi_002060 [Wolbachia sp. wRi]
Length = 206
Score = 87.6 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 30/180 (16%), Positives = 62/180 (34%), Gaps = 2/180 (1%)
Query: 89 TKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKS 148
TK + K E + ++ I + + + +K
Sbjct: 25 TKAQTNDTLAVPIPQRKKEIVEHTVVAQPRQIIEMQEEVIINEGKEFIPIPKRKKSVEKK 84
Query: 149 IDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHF 208
+ V + K +S + + + I +R ++ W+IP + +K++
Sbjct: 85 LRRDVRGAKNEIGNEKSVESKKDELVVTEIINSIREKLTKCWSIPESIAYKENFNIKINL 144
Query: 209 QLNQKGFVLGKINVDVVGG-TELVRRMLRENARKAVIKSQAFR-LSPSTYKSWRNITLFF 266
L+ +G ++ D + R + +NA +AV K L + WR +TL F
Sbjct: 145 LLSSQGEIIMADVADSDSYRNNPLFRSIADNAMRAVYKCSPLTGLPTQHHHIWREVTLDF 204
>gi|103485824|ref|YP_615385.1| hypothetical protein Sala_0329 [Sphingopyxis alaskensis RB2256]
gi|98975901|gb|ABF52052.1| hypothetical protein Sala_0329 [Sphingopyxis alaskensis RB2256]
Length = 273
Score = 87.3 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 42/267 (15%), Positives = 81/267 (30%), Gaps = 12/267 (4%)
Query: 4 ENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQ 63
G AI++ HV+ + LL + + + VD I + +
Sbjct: 12 RRGFAIAVAAHVVIIGLLSIQWTAGERRFDNPP--MEVDLI--AETAVQSTAPVISETPP 67
Query: 64 FKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPY 123
+E+ V + + + T T + + Q +
Sbjct: 68 AARLGEEDNVDIAAPEPMPAPPLPEPVVRPTPAPTPKQVARPKAQPKQTPPAAVKAQPKA 127
Query: 124 DKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVR 183
+ + + + + P K + + +R ++
Sbjct: 128 APKAPPAKDRPARPTGRLDGIAEGLSKSQPKSPSSKGAPAAATAAEVRRSIDVS----IK 183
Query: 184 NRVIANWNI-PSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLR---ENA 239
V WN +L+ + F+L Q G + G +V G + R + E A
Sbjct: 184 AAVAPRWNSCRVSGVDVDQLKTIVKFRLTQSGALAGFTSVTTTGENDSNRFQIERHQECA 243
Query: 240 RKAVIKSQAFRLSPSTYKSWRNITLFF 266
++AV + F L Y W+N TL F
Sbjct: 244 KRAVELAAPFDLPEENYSFWQNYTLDF 270
>gi|149185616|ref|ZP_01863932.1| TonB protein [Erythrobacter sp. SD-21]
gi|148830836|gb|EDL49271.1| TonB protein [Erythrobacter sp. SD-21]
Length = 264
Score = 86.9 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 29/225 (12%), Positives = 61/225 (27%), Gaps = 5/225 (2%)
Query: 47 EDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKG 106
+ + S SD E +
Sbjct: 36 APAVPPVERMTVSLAEDVGLEATAPDPVPESRAAIAPNLSDAPAPAPEILEAPSEPVVQR 95
Query: 107 EQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVE 166
+S + + +++ + T + + + + S ++
Sbjct: 96 PTPRVQSPVPSPARTSTPRRETPRETTRPKPSERGGGSRIGSDFLAGGGDSTTTNETRAP 155
Query: 167 KSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVG 226
S V ++ +W + L ++ F+LN G + G +
Sbjct: 156 ASKIGASTKASLFQAVGRQLRPHWRPVDGA-DRELLVSQVRFRLNPDGSLAGAPQLRGQR 214
Query: 227 GTELVRRM----LRENARKAVIKSQAFRLSPSTYKSWRNITLFFV 267
G R ENA +AV + F L Y++W+ +T+ F
Sbjct: 215 GITDANRAQASRHAENAIRAVQLAAPFDLPEEYYEAWKVVTVDFD 259
>gi|218516342|ref|ZP_03513182.1| outer membrane protein [Rhizobium etli 8C-3]
Length = 358
Score = 86.9 bits (213), Expect = 3e-15, Method: Composition-based stats.
Identities = 37/248 (14%), Positives = 79/248 (31%), Gaps = 5/248 (2%)
Query: 29 LLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQ 88
+ P + + + E+ + + D
Sbjct: 109 VEQPKEVASIPPPKPVEVTPPKPEEKPPEEQAKPEEPPKPDAEALPDKVPTPVVKPQVKP 168
Query: 89 TKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKS 148
+ + + + + A K + + + S + + + K
Sbjct: 169 PEPQKPAEKPPEKTPDEPKAAEKPTDKKKADKKQEVAKSASSMKSDFNADEISALLNKTD 228
Query: 149 IDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHF 208
+ +E +KS+ SQ ++ + NW I + + + +HF
Sbjct: 229 PSAGGAKRSTQEASLGAKKSNNGSKLSQSEEDALKGLIEGNWLITPGMEGLSGMVITVHF 288
Query: 209 QLNQKGFVLGKINVD--VVGGTELVRRMLRENARKAVIKSQA---FRLSPSTYKSWRNIT 263
+L++ G ++G+ ++ T+ RR L A +AV+KS L Y +W +
Sbjct: 289 KLDKDGNIIGQPEIESSGGSSTDSTRRALEGGAYRAVMKSAPSFRTNLPMDKYDAWNEVV 348
Query: 264 LFFVPSKM 271
L F PS M
Sbjct: 349 LNFHPSDM 356
>gi|159043659|ref|YP_001532453.1| hypothetical protein Dshi_1110 [Dinoroseobacter shibae DFL 12]
gi|157911419|gb|ABV92852.1| conserved hypothetical protein [Dinoroseobacter shibae DFL 12]
Length = 351
Score = 86.5 bits (212), Expect = 3e-15, Method: Composition-based stats.
Identities = 39/220 (17%), Positives = 68/220 (30%), Gaps = 11/220 (5%)
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
Q QE + D S E AT ++ + E + P +
Sbjct: 129 QVAPERQEAVTPDNSGAEAVPAEEATAPEAATTRIITEATETDPESQAPDLIASPRPSAR 188
Query: 123 YDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSR-------KRIPS 175
D+ + + + D V + S+ +
Sbjct: 189 PDRPRPVPVEAPPTPEAPPETPAETAPDPVADAVAAAVAEAAETPSAVSRPDVPVGPPLT 248
Query: 176 QDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGF--VLGKINVDVVGGTELVRR 233
+R V WN+ S + V + ++ Q G + + GG++ R
Sbjct: 249 ASERDGLRVAVQQCWNVGSLSSDALRTTVTVAVEMEQSGRPVINSIRMIGSEGGSDAAAR 308
Query: 234 MLRENARKAVIKS--QAFRLSPSTYKSWRNITLFFVPSKM 271
E AR+A+I+ F L Y WR+I + F P +M
Sbjct: 309 QAFETARRAIIRCGSAGFDLPVEKYAQWRDIEMTFNPERM 348
>gi|71275841|ref|ZP_00652125.1| TonB, C-terminal [Xylella fastidiosa Dixon]
gi|71899337|ref|ZP_00681497.1| TonB, C-terminal [Xylella fastidiosa Ann-1]
gi|170730177|ref|YP_001775610.1| TonB protein [Xylella fastidiosa M12]
gi|71163419|gb|EAO13137.1| TonB, C-terminal [Xylella fastidiosa Dixon]
gi|71730851|gb|EAO32922.1| TonB, C-terminal [Xylella fastidiosa Ann-1]
gi|167964970|gb|ACA11980.1| TonB protein [Xylella fastidiosa M12]
Length = 291
Score = 86.5 bits (212), Expect = 3e-15, Method: Composition-based stats.
Identities = 33/262 (12%), Positives = 73/262 (27%), Gaps = 13/262 (4%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPV 61
RL L +S+++H+ +L + F + + + + S + + + +
Sbjct: 14 RLNATLVLSILIHLALILGVGFAVTDKAPLVPTLDVIFSQTSTPLTPKQADFLAQANQQG 73
Query: 62 VQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVS 121
+ +Q V AT+ + L + +
Sbjct: 74 GGDQDKAQRPRDSQPGVIPQEQVGIAPQTQRATQARAPEPIQPNVITSRYGKQPLPVQQT 133
Query: 122 PY-----DKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQ 176
+ AE + ++ +S + +
Sbjct: 134 RLQDRHSQPNPTDAKREQRNAEMARLAAEVNLRSEEYAKRPTRKFISASTREYAYANYLR 193
Query: 177 DAIAIVRNRVIANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRML 235
+ R + N N P + +R + RV + + + G V + G +L
Sbjct: 194 AWVD--RAERVGNLNYPDEARRRRLSGRVIITVGIRRDGSVDSSRVLISSGS-----PLL 246
Query: 236 RENARKAVIKSQAFRLSPSTYK 257
A + V +Q F P T
Sbjct: 247 DAAALRIVQLAQPFPPLPKTQD 268
>gi|319781026|ref|YP_004140502.1| TonB family protein [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317166914|gb|ADV10452.1| TonB family protein [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 385
Score = 86.5 bits (212), Expect = 4e-15, Method: Composition-based stats.
Identities = 31/245 (12%), Positives = 75/245 (30%), Gaps = 6/245 (2%)
Query: 29 LLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQ 88
+ + D + ++ + ++ + + Q
Sbjct: 142 PKEEVKPEPVKQADPKPTPAKPAPTPPPQDKTAAIDPTPEVKPDAVAEAIAQEPPAEATQ 201
Query: 89 TKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKS 148
A E + ++ K + K+ +K+ + IS K
Sbjct: 202 LPDSAPAPEARPKPQPAQAESAKAPERKDADKPVKEASSKPKSDDKQFNADEISALLDKQ 261
Query: 149 IDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHF 208
+ + S + + S+ + + +++ W +P + + V + F
Sbjct: 262 KPSGGGAKRSTQQASLGGDKDQGQKLSRSEMGALESQLGGCWTLPVGLEGSENFLVVVRF 321
Query: 209 QLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQA--FRLSPSTYKSWRNITLFF 266
L+ G + G+ V+ G R E+A +AV K ++ W ++ + F
Sbjct: 322 NLDASGKLDGRPAVEKSSGN----RQFDESAVRAVQKCDVTGLQVPAGKQDIWADVRVTF 377
Query: 267 VPSKM 271
P +M
Sbjct: 378 DPREM 382
Score = 49.1 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 22/174 (12%), Positives = 49/174 (28%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
++ GL S+ILH L F +P S E ++VD + E + + +
Sbjct: 1 MKTGLTTSVILHTAALTFGLFTLTAPAALPSSDVESVAVDIVPMEAIAQTLQGDKKAVMH 60
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
+ + S T T + + + +
Sbjct: 61 EKPAPVPTQRPDIVPDAQKVGENSVDTDKPITPEAKPKPVDMTSAPPPAPTPIEKPKPED 120
Query: 123 YDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQ 176
K + ++ +++ V + D K +K + + +
Sbjct: 121 VPKPQEKPKPTPATEVAPAPTPKEEVKPEPVKQADPKPTPAKPAPTPPPQDKTA 174
>gi|327193468|gb|EGE60364.1| outer membrane protein [Rhizobium etli CNPAF512]
Length = 345
Score = 86.1 bits (211), Expect = 4e-15, Method: Composition-based stats.
Identities = 37/248 (14%), Positives = 79/248 (31%), Gaps = 5/248 (2%)
Query: 29 LLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQ 88
+ P + + + E+ + + D
Sbjct: 96 VEQPKEVASIPPPKPVEVTPPKPEEKPPEEQAKPEEPPKPDAEALPDKVPTPVVKPQVKP 155
Query: 89 TKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKS 148
+ + + + + A K + + + S + + + K
Sbjct: 156 PEPQKPAEKPPEKTPDEPKAAEKPTDKKKADKKQEVAKSASSMKSDFNADEISALLNKTD 215
Query: 149 IDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHF 208
+ +E +KS+ SQ ++ + NW I + + + +HF
Sbjct: 216 PSAGGAKRSTQEASLGAKKSNNGSKLSQSEEDALKGLIEGNWLITPGMEGLSGMVITVHF 275
Query: 209 QLNQKGFVLGKINVD--VVGGTELVRRMLRENARKAVIKSQA---FRLSPSTYKSWRNIT 263
+L++ G ++G+ ++ T+ RR L A +AV+KS L Y +W +
Sbjct: 276 KLDKDGNIIGQPEIESSGGSSTDSTRRALEGGAYRAVMKSAPSFRTNLPMDKYDAWNEVV 335
Query: 264 LFFVPSKM 271
L F PS M
Sbjct: 336 LNFHPSDM 343
>gi|71897928|ref|ZP_00680133.1| TonB, C-terminal [Xylella fastidiosa Ann-1]
gi|182681440|ref|YP_001829600.1| TonB family protein [Xylella fastidiosa M23]
gi|71732172|gb|EAO34227.1| TonB, C-terminal [Xylella fastidiosa Ann-1]
gi|182631550|gb|ACB92326.1| TonB family protein [Xylella fastidiosa M23]
Length = 291
Score = 86.1 bits (211), Expect = 4e-15, Method: Composition-based stats.
Identities = 33/262 (12%), Positives = 73/262 (27%), Gaps = 13/262 (4%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPV 61
RL L +S+++H+ +L + F + + + + S + + + +
Sbjct: 14 RLNTTLVLSILIHLALILGVGFAVTDKAPLVPTLDVIFSQTSTPLTPKQADFLAQANQQG 73
Query: 62 VQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVS 121
+ +Q V AT+ + L + +
Sbjct: 74 GGDQDKAQRPRDSQPGVIPQEQVGIAPQTQRATQARAPEPIQPNVITSRYGKQPLPVQQT 133
Query: 122 PY-----DKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQ 176
+ AE + ++ +S + +
Sbjct: 134 RLQDRHSQPNPTDAKREQRNAEMARLAAEVNLRSEEYAKRPTRKFISASTREYAYANYLR 193
Query: 177 DAIAIVRNRVIANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRML 235
+ R + N N P + +R + RV + + + G V + G +L
Sbjct: 194 AWVD--RAERVGNLNYPDEARRRRLSGRVIITVGIRRDGSVDSSRVLISSGS-----PLL 246
Query: 236 RENARKAVIKSQAFRLSPSTYK 257
A + V +Q F P T
Sbjct: 247 DAAALRIVQLAQPFPPLPKTQD 268
>gi|42520110|ref|NP_966025.1| hypothetical protein WD0214 [Wolbachia endosymbiont of Drosophila
melanogaster]
gi|99035998|ref|ZP_01315039.1| hypothetical protein Wendoof_01000110 [Wolbachia endosymbiont of
Drosophila willistoni TSC#14030-0811.24]
gi|42409847|gb|AAS13959.1| hypothetical protein WD_0214 [Wolbachia endosymbiont of Drosophila
melanogaster]
Length = 189
Score = 86.1 bits (211), Expect = 5e-15, Method: Composition-based stats.
Identities = 30/180 (16%), Positives = 63/180 (35%), Gaps = 2/180 (1%)
Query: 89 TKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKS 148
TK + K E + ++ I + + + +K
Sbjct: 8 TKAQTNDTLAVPIPQRKKEIVEHTVVAQPRQIIEMQEEVIINEGKEFIPIPKRKKSVEKK 67
Query: 149 IDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHF 208
+ V + K +S + + + I +R+++ W+IP + +K++
Sbjct: 68 LRRDVRGAKNEIGNEKSVESKKDELVVTEIINSIRDKLTKCWSIPESIAYKENFNIKINL 127
Query: 209 QLNQKGFVLGKINVDVVGG-TELVRRMLRENARKAVIKSQAFR-LSPSTYKSWRNITLFF 266
L+ +G ++ D + R + +NA +AV K L + WR +TL F
Sbjct: 128 LLSSQGEIIMADVADSDSYRNNPLFRSIADNAMRAVYKCSPLTGLPTQHHHIWREVTLDF 187
>gi|15838551|ref|NP_299239.1| TonB protein [Xylella fastidiosa 9a5c]
gi|9107059|gb|AAF84759.1|AE004015_2 TonB protein [Xylella fastidiosa 9a5c]
Length = 299
Score = 86.1 bits (211), Expect = 5e-15, Method: Composition-based stats.
Identities = 33/262 (12%), Positives = 72/262 (27%), Gaps = 13/262 (4%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPV 61
RL L +S+++H+ +L + F + + + S + + + +
Sbjct: 22 RLNATLVLSILIHLALILGVGFAVTDNAPLVPTLDVIFSQTSTPLTPKQADFLAQANQQG 81
Query: 62 VQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVS 121
+ +Q V AT+ + L + +
Sbjct: 82 GGDQDKAQRPRDSQPGVIPQEQVGIAPQTQRATQARAPEPIQPNVITSRYGKQPLPVQQT 141
Query: 122 PY-----DKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQ 176
+ AE + ++ +S + +
Sbjct: 142 RLQDRHSQPNPTDAKREQRNAEMARLAAEVNLRSEEYAKRPTRKFISASTREYAYANYLR 201
Query: 177 DAIAIVRNRVIANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRML 235
+ R + N N P + +R + RV + + + G V + G +L
Sbjct: 202 AWVD--RAERVGNLNYPDEARRRRLSGRVIITVGIRRDGSVDSSRVLISSGS-----PLL 254
Query: 236 RENARKAVIKSQAFRLSPSTYK 257
A + V +Q F P T
Sbjct: 255 DAAALRIVQLAQPFPPLPKTQD 276
>gi|157803960|ref|YP_001492509.1| hypothetical protein A1E_03985 [Rickettsia canadensis str. McKiel]
gi|157785223|gb|ABV73724.1| hypothetical protein A1E_03985 [Rickettsia canadensis str. McKiel]
Length = 316
Score = 85.7 bits (210), Expect = 5e-15, Method: Composition-based stats.
Identities = 36/243 (14%), Positives = 80/243 (32%), Gaps = 13/243 (5%)
Query: 42 DNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATE------ 95
++ + K + + P + + + + E D E
Sbjct: 74 EDAKKSEQSKPKAEPQDSPKEEKAQEIETKTLEETPKVEENKPIEDPKSEEVKELLSEKK 133
Query: 96 ---NETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTV 152
E K K + K+ + + + K + + ++L+ S + +
Sbjct: 134 EEIKEEKSKKEEKKQAEEKKKSKKKPKEVKKKEPKTDELDSLLKNLEQSSEGDNVKSNKH 193
Query: 153 VVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANW-NIPSDFKRFKKLRVKMHFQLN 211
+ S A+++ ++ +W NIP+ + K++V + L+
Sbjct: 194 KRSKKVDNAKGAKGIYTEGLPLSDSESALIKRQIERHWSNIPAGVRGNNKVKVIISITLD 253
Query: 212 QKGFVLGKINVDVVGGT--ELVRRMLRENARKAVIKSQAFRLS-PSTYKSWRNITLFFVP 268
+ G V + + V L +NA +AV ++ P + W+ I F P
Sbjct: 254 KAGNVEQVKVQEKICPNITASVCEALADNAIRAVWQASPIENLDPGRFNHWKEINFSFDP 313
Query: 269 SKM 271
SK+
Sbjct: 314 SKL 316
>gi|319787990|ref|YP_004147465.1| TonB family protein [Pseudoxanthomonas suwonensis 11-1]
gi|317466502|gb|ADV28234.1| TonB family protein [Pseudoxanthomonas suwonensis 11-1]
Length = 290
Score = 85.7 bits (210), Expect = 6e-15, Method: Composition-based stats.
Identities = 45/261 (17%), Positives = 89/261 (34%), Gaps = 17/261 (6%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKI---- 57
RL L +S ++H + +L L F F + + + + S + + +
Sbjct: 16 RLSATLVLSALVHGIVILGLGFAFRGEAPLVPTLDAIFSNTSTELTPEQADFLAQANNRG 75
Query: 58 --EEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESAL 115
E Q SQ +V E + Q A E + + +S +GEQ + E
Sbjct: 76 GGEHDQAQRPRDSQPGVVPRPEEGEAPLPQAAQEPPPAPETQARVVTSRRGEQPVPEPQP 135
Query: 116 LRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPS 175
L+ + +S A AE + + ++ +S +
Sbjct: 136 LQQAETLPP---VSPARAARDAEMARLAAEVYLRSELYAKRPTRKFVSASTREYAYANYL 192
Query: 176 QDAIAIVRNRVIANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRM 234
++ + R I N N P + +R + +V + + + G V + G +
Sbjct: 193 REWVD--RAERIGNLNYPDEARRRRLGGQVVISVGVRRDGTVESTRILRSSGT-----PL 245
Query: 235 LRENARKAVIKSQAFRLSPST 255
L + + V ++ F P T
Sbjct: 246 LDASVERIVRLAEPFPPLPET 266
>gi|58698232|ref|ZP_00373152.1| conserved hypothetical protein [Wolbachia endosymbiont of
Drosophila ananassae]
gi|58535259|gb|EAL59338.1| conserved hypothetical protein [Wolbachia endosymbiont of
Drosophila ananassae]
Length = 189
Score = 85.7 bits (210), Expect = 6e-15, Method: Composition-based stats.
Identities = 30/180 (16%), Positives = 62/180 (34%), Gaps = 2/180 (1%)
Query: 89 TKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKS 148
TK + K E + ++ I + + + +K
Sbjct: 8 TKAQTNDTLAVPIPQRKKEIVEHTVVAQPRQIIEMQEEVIINEGKEFIPIPKRKKSVEKK 67
Query: 149 IDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHF 208
+ V + K +S + + + I +R ++ W+IP + +K++
Sbjct: 68 LRRDVRGAKNEIGNEKSVESKKDELVVTEIINSIREKLTKCWSIPESIAYKENFNIKINL 127
Query: 209 QLNQKGFVLGKINVDVVGG-TELVRRMLRENARKAVIKSQAFR-LSPSTYKSWRNITLFF 266
L+ +G ++ D + R + +NA +AV K L + WR +TL F
Sbjct: 128 LLSSQGEIIMADVADSDSYRNNPLFRSIADNAMRAVYKCSPLTGLPTQHHHIWREVTLDF 187
>gi|182677269|ref|YP_001831415.1| TolA protein [Beijerinckia indica subsp. indica ATCC 9039]
gi|182633152|gb|ACB93926.1| TolA protein [Beijerinckia indica subsp. indica ATCC 9039]
Length = 436
Score = 85.7 bits (210), Expect = 7e-15, Method: Composition-based stats.
Identities = 27/242 (11%), Positives = 78/242 (32%), Gaps = 6/242 (2%)
Query: 33 ISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTH 92
+ + +S + K + +P + + ++ +
Sbjct: 197 EPKPQPVSPEAAEPLPAPRPKAETKPKPEPKSESKPEDKPKPHEAKPNETKPTPKFAPDA 256
Query: 93 ATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTV 152
+ + + ++ ++A + A S + L + K+
Sbjct: 257 VAKLLEQTPAKTETKKAEAKPAQRPKSGSEAATEPSKFNAADISKLLSAEAPQHKASTGK 316
Query: 153 VVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQ 212
V+ L + +I++++ W+ +K ++H Q +
Sbjct: 317 TVQQTASLGLPNANAAKMSPSMWDRLDSILQDQYKQCWSFI--GLNKQKYVPEIHVQYAE 374
Query: 213 KGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPS---TYKSWRNITLFFVPS 269
G ++G+ ++ + ++ R L ++A +AV + ++ Y W+ + F P
Sbjct: 375 DGSLIGQPSL-LNPPSDPQLRGLADSAMRAVRRCNPLKIPAQYQPYYDQWKGRIVRFDPE 433
Query: 270 KM 271
+M
Sbjct: 434 EM 435
>gi|283856202|ref|YP_161899.2| hypothetical protein ZMO0164 [Zymomonas mobilis subsp. mobilis ZM4]
gi|283775198|gb|AAV88788.2| conserved hypothetical protein [Zymomonas mobilis subsp. mobilis
ZM4]
Length = 359
Score = 85.3 bits (209), Expect = 7e-15, Method: Composition-based stats.
Identities = 37/252 (14%), Positives = 78/252 (30%), Gaps = 10/252 (3%)
Query: 26 NVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRF 85
N + P + + V+ + K +P +Q+ V +
Sbjct: 111 NKPVAKPEPQPKAKPVE----TPKPAPVAKPEPQPREAAVAPAQKAKVTAAEKTQPKAES 166
Query: 86 SDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAE 145
+K H S S A + ++ + + K + +
Sbjct: 167 KTPSKPHNDVKNLMESFSKSQVNVSDHKAGSNTESNKGKEKSNASDSGKSKSDNSRNSGS 226
Query: 146 KKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPS-DFKRFKKLRV 204
+ D + SK + SS A ++ +V +++ + ++
Sbjct: 227 RLGNDFLKGILGGTGTSSKPQGSSISGPALNGLGAAIKRQVQPCYDLGALGGTDAMRIIT 286
Query: 205 KMHFQLNQKGFVLGKINVDV----VGGTELVRRMLRENARKAVIKSQAFRLSPSTYK-SW 259
+ + N G V G + R + E +R+AV++ L YK W
Sbjct: 287 VLRLRFNPDGSVNGVPEMIEQTGLTSDNRSYARQMAEISRRAVLRCAPLHLPAELYKGGW 346
Query: 260 RNITLFFVPSKM 271
I + F+P++M
Sbjct: 347 DEIDIGFIPAQM 358
Score = 54.1 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/177 (12%), Positives = 52/177 (29%), Gaps = 1/177 (0%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNI-YNEDYHSSKYKKIEEPV 61
+ G I++ HV+ LL F++Q + + V + SS E
Sbjct: 7 MRRGFFIAVAGHVLLLLFFLIRFSLQDKRQSQPVDTIEVTFAHGVGIHSSSPEASSEAAR 66
Query: 62 VQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVS 121
E + ++ + +D T+N K + + + K +
Sbjct: 67 ATTAPKIGEEKEAAPAPKKETPKEADSQPKAQTQNSAKAEAKVENKPVAKPEPQPKAKPV 126
Query: 122 PYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDA 178
K + ++ A+K + K E + + + + +
Sbjct: 127 ETPKPAPVAKPEPQPREAAVAPAQKAKVTAAEKTQPKAESKTPSKPHNDVKNLMESF 183
>gi|260753279|ref|YP_003226172.1| hypothetical protein Za10_1043 [Zymomonas mobilis subsp. mobilis
NCIMB 11163]
gi|258552642|gb|ACV75588.1| hypothetical protein Za10_1043 [Zymomonas mobilis subsp. mobilis
NCIMB 11163]
Length = 359
Score = 85.3 bits (209), Expect = 7e-15, Method: Composition-based stats.
Identities = 36/252 (14%), Positives = 77/252 (30%), Gaps = 10/252 (3%)
Query: 26 NVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRF 85
N + P + + V+ + K +P +Q+ V +
Sbjct: 111 NKPVAKPEPQPKAKPVE----TPKPAPVAKPEPQPREAAVAPAQKAKVTAAEKTQPKAES 166
Query: 86 SDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAE 145
+K H S A + ++ + + K + +
Sbjct: 167 KTPSKPHNDVKNLMESFPKSQVNVSDHKAGSNTESNKGKEKSNASDSGKSKSDNSRNSGS 226
Query: 146 KKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPS-DFKRFKKLRV 204
+ D + SK + SS A ++ +V +++ + ++
Sbjct: 227 RLGNDFLKGILGGTGTSSKPQGSSISGPALNGLGAAIKRQVQPCYDLGALGGTDAMRIIT 286
Query: 205 KMHFQLNQKGFVLGKINVDV----VGGTELVRRMLRENARKAVIKSQAFRLSPSTYK-SW 259
+ + N G V G + R + E +R+AV++ L YK W
Sbjct: 287 VLRLRFNPDGSVNGVPEMIEQTGLTSDNRSYARQMAEISRRAVLRCAPLHLPAELYKGGW 346
Query: 260 RNITLFFVPSKM 271
I + F+P++M
Sbjct: 347 DEIDIGFIPAQM 358
Score = 54.5 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/177 (12%), Positives = 52/177 (29%), Gaps = 1/177 (0%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNI-YNEDYHSSKYKKIEEPV 61
+ G I++ HV+ LL F++Q + + V + SS E
Sbjct: 7 MRRGFFIAVAGHVLLLLFFLIRFSLQDKRQSQPVDTIEVTFAHGIGIHSSSPEASSEAAR 66
Query: 62 VQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVS 121
E + ++ + +D T+N K + + + K +
Sbjct: 67 ATTAPKIGEEKEAAPAPKKETPKEADSQPKAQTQNSAKAEAKVENKPVAKPEPQPKAKPV 126
Query: 122 PYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDA 178
K + ++ A+K + K E + + + + +
Sbjct: 127 ETPKPAPVAKPEPQPREAAVAPAQKAKVTAAEKTQPKAESKTPSKPHNDVKNLMESF 183
>gi|28198748|ref|NP_779062.1| TonB protein [Xylella fastidiosa Temecula1]
gi|28056839|gb|AAO28711.1| TonB protein [Xylella fastidiosa Temecula1]
gi|307579890|gb|ADN63859.1| TonB protein [Xylella fastidiosa subsp. fastidiosa GB514]
Length = 299
Score = 85.3 bits (209), Expect = 7e-15, Method: Composition-based stats.
Identities = 33/262 (12%), Positives = 73/262 (27%), Gaps = 13/262 (4%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPV 61
RL L +S+++H+ +L + F + + + + S + + + +
Sbjct: 22 RLNTTLVLSILIHLALILGVGFAVTDKAPLVPTLDVIFSQTSTPLTPKQADFLAQANQQG 81
Query: 62 VQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVS 121
+ +Q V AT+ + L + +
Sbjct: 82 GGDQDKAQRPRDSQPGVIPQEQVGIAPQTQRATQARAPEPIQPNVITSRYGKQPLPVQQT 141
Query: 122 PY-----DKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQ 176
+ AE + ++ +S + +
Sbjct: 142 RLQDRHSQPNPTDAKREQRNAEMARLAAEVNLRSEEYAKRPTRKFISASTREYAYANYLR 201
Query: 177 DAIAIVRNRVIANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRML 235
+ R + N N P + +R + RV + + + G V + G +L
Sbjct: 202 AWVD--RAERVGNLNYPDEARRRRLSGRVIITVGIRRDGSVDSSRVLISSGS-----PLL 254
Query: 236 RENARKAVIKSQAFRLSPSTYK 257
A + V +Q F P T
Sbjct: 255 DAAALRIVQLAQPFPPLPKTQD 276
>gi|163738348|ref|ZP_02145763.1| Holliday junction DNA helicase B [Phaeobacter gallaeciensis BS107]
gi|161388269|gb|EDQ12623.1| Holliday junction DNA helicase B [Phaeobacter gallaeciensis BS107]
Length = 379
Score = 85.3 bits (209), Expect = 8e-15, Method: Composition-based stats.
Identities = 32/242 (13%), Positives = 68/242 (28%), Gaps = 6/242 (2%)
Query: 34 SRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHA 93
R ++ VD + + + + + + + + + +
Sbjct: 137 ERPQLRPVDRV--APTPVAPPEPDTQIADVAQPEVSDEVGTEPAQESQQATAEAAANDRI 194
Query: 94 TENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVV 153
E + + A +S R + + + + ++
Sbjct: 195 VTEEVEAETDQVASAAPAQSLRPRRRPDRPEPVAQPEPEPTAAEPETAPSPDRSDAVEDA 254
Query: 154 VRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQK 213
+ + +R V WN+ S + V + L Q
Sbjct: 255 LAAALAGGGEVEAPEPSGPPLTSGEKDALRVAVQQCWNVGSLSSEALRTTVVVSVALTQD 314
Query: 214 GFVL--GKINVDVVGGTELVRRMLRENARKAVIKSQA--FRLSPSTYKSWRNITLFFVPS 269
G + GG+ AR+A+++ A F+L Y WRNI + F P
Sbjct: 315 GRPEEGSIRMLSSTGGSGSAANQAFGAARRAILRCGARGFQLPSDKYAQWRNIEMTFNPE 374
Query: 270 KM 271
+M
Sbjct: 375 RM 376
Score = 42.6 bits (98), Expect = 0.054, Method: Composition-based stats.
Identities = 13/194 (6%), Positives = 47/194 (24%), Gaps = 14/194 (7%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLV-PISRREMLSVDNIYNEDYHSSKYKKIEEPV 61
++ G IS+ H + + F P++ +++ + + + +
Sbjct: 1 MQTGTKISVAGHALLAGWVVFGAWFPSEPLPLAVQDVALISSEEFAKLSQQRAAPVVADT 60
Query: 62 VQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMP-- 119
+ + + D T+ + + + +
Sbjct: 61 AGDLTQPEPEPRPELTSPPEPDPEPQITQPEPVTPPEPDAELGERPEPQPVEPAPPVAAP 120
Query: 120 -----------VSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKS 168
++ + ++ I V E+ ++ +
Sbjct: 121 TPPDVPDATTVTPQLTERPQLRPVDRVAPTPVAPPEPDTQIADVAQPEVSDEVGTEPAQE 180
Query: 169 SRKRIPSQDAIAIV 182
S++ A +
Sbjct: 181 SQQATAEAAANDRI 194
>gi|126725884|ref|ZP_01741726.1| tonB domain protein, putative [Rhodobacterales bacterium HTCC2150]
gi|126705088|gb|EBA04179.1| tonB domain protein, putative [Rhodobacterales bacterium HTCC2150]
Length = 275
Score = 85.3 bits (209), Expect = 9e-15, Method: Composition-based stats.
Identities = 30/169 (17%), Positives = 62/169 (36%), Gaps = 6/169 (3%)
Query: 107 EQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVE 166
+ A S ++ + D+ +++ + + L + ++ P + L
Sbjct: 106 DVAESVSQVVTIIKPRLDENMMAQLMDIQSKLAETKSELLSTQLQLMNIPVRPLGLDS-- 163
Query: 167 KSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVL--GKINVDV 224
+ S VR V WN+ S ++ V + + + G V
Sbjct: 164 METAGPPLSGVEKEGVRIAVNNCWNVGSLSSEAQQTTVVVAVSMKKDGRPKNGSIRMVGS 223
Query: 225 VGGTELVRRMLRENARKAVIKSQA--FRLSPSTYKSWRNITLFFVPSKM 271
GG+ E AR+A+I+ + F L Y+ W++I + F P ++
Sbjct: 224 SGGSASAANKAYEAARRAIIRCGSKGFPLPDDKYEQWKDIEMTFEPIRL 272
>gi|224370140|ref|YP_002604304.1| hypothetical protein HRM2_30570 [Desulfobacterium autotrophicum
HRM2]
gi|223692857|gb|ACN16140.1| hypothetical protein HRM2_30570 [Desulfobacterium autotrophicum
HRM2]
Length = 324
Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats.
Identities = 40/297 (13%), Positives = 89/297 (29%), Gaps = 41/297 (13%)
Query: 8 AISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNE----------DYHSSKYKKI 57
S+++H+ L+F + + ++ VD + D + K+
Sbjct: 35 LCSVLVHIALAWGLFFVQS--IPPKRVLPLVIQVDLVSLSLPGEVSATLGDAVEADVKEE 92
Query: 58 EEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATE-NETKRSSSSKGEQALKESALL 116
K ++ + V+ + ++ A + E ++ L
Sbjct: 93 PVIQPPPKPAAVKTPVKQTVTVPERVVHPPEPESVAEKITEPVKAPEPVQAAEPDRKLAL 152
Query: 117 RMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEK--------- 167
+ DK S + + ++ + + +++ R +K +
Sbjct: 153 KKKTFKADKVMESARKSIAKKVETSTPSADNTLERAFSRLEKAVEAQAGSRPVTGVTGVT 212
Query: 168 ------------SSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFK-KLRVKMHFQLNQKG 214
+ + R+ NW + +R + ++ Q G
Sbjct: 213 GVTGVTGAGAKGDKTELTAIDLYNVELMYRIRQNWAFNERLANAEQGIRAVVLIKILQNG 272
Query: 215 FVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPSTYKSWRNITLFFVPSKM 271
+ G R L E+A KAV KS P Y ++ ++ L F PS +
Sbjct: 273 QIRDVWFETRSGN-----RYLDESALKAVKKSNPLPPLPKGYVTY-DLGLQFTPSGL 323
>gi|254000101|ref|YP_003052164.1| protein TolA [Methylovorus sp. SIP3-4]
gi|313202060|ref|YP_004040718.1| protein tola [Methylovorus sp. MP688]
gi|253986780|gb|ACT51637.1| protein TolA [Methylovorus sp. SIP3-4]
gi|312441376|gb|ADQ85482.1| protein TolA [Methylovorus sp. MP688]
Length = 260
Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats.
Identities = 41/268 (15%), Positives = 86/268 (32%), Gaps = 21/268 (7%)
Query: 5 NGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQF 64
A+S+++H + L+LL F+F+ + + P+S ++ + I E + +
Sbjct: 12 RAGALSVLVHGLLLMLLLFSFHWKTVQPMSVAQVELWEAIPAEKAVQPPKPEPTPEPPKP 71
Query: 65 KGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYD 124
+ + + K KE ++ P
Sbjct: 72 EPKP-------------EPKPEPKPDPAPEPQPKAEIQVKKEPVKPKEEKPVKPKEEPKP 118
Query: 125 KQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRN 184
+ K KE L+ + A + K + I ++ N
Sbjct: 119 EPKKKDEKPKEDMLKKLQQAMLEEDAKATQAAAPKTGPAASASPKVDPSEVAKYIGLITN 178
Query: 185 RVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVI 244
++ N + S K + + L G ++G + G + +A++
Sbjct: 179 KIRRN--VNSQLCGSGKPELTFNLNLMPTGELIGAPRLVKGSG----IPACDDAVERAIL 232
Query: 245 KSQAFRLS--PSTYKSWRNITLFFVPSK 270
+SQ L P +RN+ L F P++
Sbjct: 233 QSQPLPLPTQPDLLAQFRNLELKFRPNE 260
>gi|241761364|ref|ZP_04759452.1| conserved hypothetical protein [Zymomonas mobilis subsp. mobilis
ATCC 10988]
gi|241374271|gb|EER63768.1| conserved hypothetical protein [Zymomonas mobilis subsp. mobilis
ATCC 10988]
Length = 359
Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 37/252 (14%), Positives = 77/252 (30%), Gaps = 10/252 (3%)
Query: 26 NVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRF 85
N + P + + V+ K +P +Q+ V +
Sbjct: 111 NKPVAKPEPQPKAKPVE----TPKPVPVAKPEPQPREAAVAPAQKAKVTAAEKTQPKAES 166
Query: 86 SDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAE 145
+K H S S A + ++ + + K + +
Sbjct: 167 KTPSKPHNDVKNLMESFSKSQVNVSDHKAGSNTGSNKGKEKSNASDSGKSKSDNSRNSGS 226
Query: 146 KKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPS-DFKRFKKLRV 204
+ D + SK + SS A ++ +V +++ + ++
Sbjct: 227 RLGNDFLKGILGGTGTSSKPQGSSISGPALNGLGAAIKRQVQPCYDLGALGGTDAMRIIT 286
Query: 205 KMHFQLNQKGFVLGKINVDV----VGGTELVRRMLRENARKAVIKSQAFRLSPSTYK-SW 259
+ + N G V G + R + E +R+AV++ L YK W
Sbjct: 287 VLRLRFNPDGSVNGVPEMIEQTGLTSDNRSYARQMAEISRRAVLRCAPLHLPAELYKGGW 346
Query: 260 RNITLFFVPSKM 271
I + F+P++M
Sbjct: 347 DEIDIGFIPAQM 358
Score = 53.8 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/177 (12%), Positives = 52/177 (29%), Gaps = 1/177 (0%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNI-YNEDYHSSKYKKIEEPV 61
+ G I++ HV+ LL F++Q + + V + SS E
Sbjct: 7 MRRGFFIAVAGHVLLLLFFLIRFSLQDKRQSQPVDTIEVTFAHGVGIHSSSPEASSEAAR 66
Query: 62 VQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVS 121
E + ++ + +D T+N K + + + K +
Sbjct: 67 ATTAPKIGEEKEAAPAPKKETPKEADSQPKAQTQNSAKAEAKVENKPVAKPEPQPKAKPV 126
Query: 122 PYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDA 178
K + ++ A+K + K E + + + + +
Sbjct: 127 ETPKPVPVAKPEPQPREAAVAPAQKAKVTAAEKTQPKAESKTPSKPHNDVKNLMESF 183
>gi|218460855|ref|ZP_03500946.1| outer membrane protein [Rhizobium etli Kim 5]
Length = 352
Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 36/248 (14%), Positives = 77/248 (31%), Gaps = 5/248 (2%)
Query: 29 LLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQ 88
+ P + + + E+ + + D
Sbjct: 103 VEQPKEVASIPPPKPVEVTPPKPEEKPPEEQAKPEEPPKPDAEALPDKVPTPVVKPQVKP 162
Query: 89 TKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKS 148
+ + + + + A + + + S + + + K
Sbjct: 163 PEPQKPAEKPPEKTPDQPKAAEAPTDKKKADKKQEVAKSASSMKSDFNADEISALLNKTD 222
Query: 149 IDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHF 208
+ +E +KS+ SQ ++ + NW I + + + +HF
Sbjct: 223 PSAGGAKRSTQEASLGAKKSNGASKLSQSEEDALKGLIEGNWLITPGMEGLSGMVITVHF 282
Query: 209 QLNQKGFVLGKINVD--VVGGTELVRRMLRENARKAVIKSQA---FRLSPSTYKSWRNIT 263
+L++ G ++G+ ++ T+ RR L A +AV+KS L Y W +
Sbjct: 283 KLDKDGNIIGQPEIESSGGSSTDSTRRALESGAYRAVMKSAPSFRTNLPMDKYDVWNEVV 342
Query: 264 LFFVPSKM 271
L F PS M
Sbjct: 343 LNFHPSDM 350
>gi|86139147|ref|ZP_01057717.1| tonB domain protein, putative [Roseobacter sp. MED193]
gi|85823991|gb|EAQ44196.1| tonB domain protein, putative [Roseobacter sp. MED193]
Length = 375
Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 36/251 (14%), Positives = 74/251 (29%), Gaps = 8/251 (3%)
Query: 29 LLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQE----NGDR 84
P ++ + + + + + + + + + + + S E +
Sbjct: 122 PEAPTESPAVIPSLPVPEQLRPADRVAPVPVEAPEEEVAIDDLVQPEVSPDEGALSEQEV 181
Query: 85 FSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFA 144
A++ ++ ++ + V P + + +
Sbjct: 182 QEATAPEAASDRIVTEANENEEAEPTPPVTAPVTSVRPKPRPSRPAPSAVAETPPSTPQT 241
Query: 145 EKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRV 204
E+ S + + +R V WN+ S K V
Sbjct: 242 EQASAIEDALAAAIGGGGEVAAPEPSGPPLTVGEKDALRVSVSKCWNVGSLSTEALKTTV 301
Query: 205 KMHFQLNQKGFVL--GKINVDVVGGTELVRRMLRENARKAVIKSQA--FRLSPSTYKSWR 260
++ L G V GG+ + E AR+A+I+ A F L Y WR
Sbjct: 302 EVSVSLEADGRPKNGSIRMVSSTGGSAGAAKQAYEAARRAIIRCGAKGFSLPSEKYDHWR 361
Query: 261 NITLFFVPSKM 271
+I + F P KM
Sbjct: 362 DIVMTFNPEKM 372
Score = 39.9 bits (91), Expect = 0.43, Method: Composition-based stats.
Identities = 24/184 (13%), Positives = 55/184 (29%), Gaps = 3/184 (1%)
Query: 1 MRLENGLAISMILHVMFLLLLYFN---FNVQLLVPISRREMLSVDNIYNEDYHSSKYKKI 57
M L+ G IS+ H + + + F + L +P+ ++S + +
Sbjct: 1 MGLQTGTKISLAAHGLLVSWVAFGAWLPSEPLPLPVQEVAVISAEEFARLSQQIQAPEVS 60
Query: 58 EEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLR 117
E P ++ E S T A E + + E + + L
Sbjct: 61 ESPSPLTAPATSPEPPEVSVRPETRPDTSTPQSTPAPVEEAPVPTPPEPEPEPELAETLP 120
Query: 118 MPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQD 177
+P +P + + + + L+ ++ +L+ + Q+
Sbjct: 121 VPEAPTESPAVIPSLPVPEQLRPADRVAPVPVEAPEEEVAIDDLVQPEVSPDEGALSEQE 180
Query: 178 AIAI 181
Sbjct: 181 VQEA 184
>gi|254461448|ref|ZP_05074864.1| possible TolA protein [Rhodobacterales bacterium HTCC2083]
gi|206678037|gb|EDZ42524.1| possible TolA protein [Rhodobacteraceae bacterium HTCC2083]
Length = 355
Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 27/218 (12%), Positives = 58/218 (26%), Gaps = 12/218 (5%)
Query: 64 FKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPY 123
K + + + D D + A+E + + + V+
Sbjct: 135 PKPRPADRVASEAVAAPEPDVEIDNSAQEASEPDANAEQVVEEQSETAPEEAATEIVTEA 194
Query: 124 DKQKISKA-------TNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQ 176
++ S + + V + +
Sbjct: 195 EQPSASAPSATTRPRARPRDTAAASEAKQSDTSSGVNAALAEALGEPAASDEVSGSTLTA 254
Query: 177 DAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVL--GKINVDVVGGTELVRRM 234
+ + V W + + + V + L+Q G V+ GG
Sbjct: 255 GEVNGFKLAVQDCWAVDIG-SQSSDVVVVVTMSLDQSGKVVPGSIELKSSSGGAGRAVET 313
Query: 235 LRENARKAVIKSQ--AFRLSPSTYKSWRNITLFFVPSK 270
AR+A+ Q + L Y+ W++I + F P +
Sbjct: 314 AFLRARRAIFGCQNDGYDLPDDKYEQWKDIEVTFNPKE 351
>gi|149915619|ref|ZP_01904145.1| Holliday junction DNA helicase B [Roseobacter sp. AzwK-3b]
gi|149810511|gb|EDM70354.1| Holliday junction DNA helicase B [Roseobacter sp. AzwK-3b]
Length = 380
Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 29/230 (12%), Positives = 67/230 (29%), Gaps = 4/230 (1%)
Query: 46 NEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSK 105
+ + + V+ + + + + E +++ T + +S
Sbjct: 148 APEAVAPPEPDVAIDEVERQETVPDAEAAENVEPETEATAPEESTTEIVTEAEQVDPASA 207
Query: 106 GEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKV 165
Q + E +S + +
Sbjct: 208 APSRSLRPKTRPAQPQTAQPQPAEQTQPAEDTRTAARPQPDESAVNDALAEALGQAGGAD 267
Query: 166 EKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVL--GKINVD 223
+ + + +R V WN+ S + V + ++ + + +
Sbjct: 268 QGAPSGPPLTAGEKDALRVSVQQCWNVGSLSSEALRTTVVVKVRMGEDAKPVSGSIELLS 327
Query: 224 VVGGTELVRRMLRENARKAVIKS--QAFRLSPSTYKSWRNITLFFVPSKM 271
GG++ R E AR+A+I+ + L Y WR+I + F P +M
Sbjct: 328 SSGGSDAAARQAYEAARRAIIRCGANGYDLPKDKYDHWRDIEMTFNPERM 377
>gi|331007791|ref|ZP_08330905.1| TolA protein [gamma proteobacterium IMCC1989]
gi|330418400|gb|EGG92952.1| TolA protein [gamma proteobacterium IMCC1989]
Length = 276
Score = 83.8 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 41/276 (14%), Positives = 99/276 (35%), Gaps = 18/276 (6%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVP-ISRREMLSVDNIYNEDYHSSKYKKIEEPVVQF 64
+ +S+I H + + + + ++ I + + + E K +E+ V
Sbjct: 7 AIILSVIGHSLLIWFVVWGWSASAEKTVIKKPLYIKATLVQLEQKAKPVAKVVEKKVEPP 66
Query: 65 KGSSQENLVRDFSVQENGD----RFSDQTKTHATENETKRSSSSKGEQALKESALLRMPV 120
K ++ + ++ + + A E + +++ +K ++
Sbjct: 67 KVDESLKKKQEDAAKKKREAALQAQKKAQQKKAAEEKARKNQLAKKRAEEEKQKEAERKR 126
Query: 121 SPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIA 180
++QK + K+ LQ E++ + +K + + ++
Sbjct: 127 KEQEQQKKLEEQRKKAALQKEIEKERQRELEKRINAEKARIEEAKQAANDAE-LVASYTG 185
Query: 181 IVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENAR 240
++ +V ANW+ P + + + QL G V+G ++ G +AR
Sbjct: 186 VIDEKVSANWSRPPSAR--NGMSALLRIQLVPTGRVIGVDIIESSGDA-----AFDRSAR 238
Query: 241 KAVIKSQAFR----LSPSTYKS-WRNITLFFVPSKM 271
AV K++ F L ++ +R L+F P +
Sbjct: 239 LAVNKAEIFPELQNLPSRVFEQSFRVFNLYFEPEDL 274
>gi|149376905|ref|ZP_01894660.1| Periplasmic protein TonB, links inner and outer membranes
[Marinobacter algicola DG893]
gi|149358797|gb|EDM47266.1| Periplasmic protein TonB, links inner and outer membranes
[Marinobacter algicola DG893]
Length = 288
Score = 83.8 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 33/269 (12%), Positives = 81/269 (30%), Gaps = 23/269 (8%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPV 61
R L +++ LH + +L P S + + + +D +
Sbjct: 10 RFSFTLFMALALHAIVVL----GITFAPESPRSSAQTMEITLSQFDDETDPEKADFLAQT 65
Query: 62 VQFKGSSQENLVRDFSVQE-----------NGDRFSDQTKTHATENETKRSSSSKGEQAL 110
Q ++E V + Q + S E ++ + Q
Sbjct: 66 SQKGSGTEEEPVEMTTPQPSDVSQPEIAEVQPEPPSRVEPRQQQEQPVVQTEAKNERQVS 125
Query: 111 KESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSR 170
+ S P ++ + ++ + + +P + + S
Sbjct: 126 EPSTAEPTSDEPLPVKEKKSLMERSLEIASLEARFDQQRRAYAKKPRVMRVTAASTLKST 185
Query: 171 KRIPSQDAIAIVRNRVIANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKINVDVVGGTE 229
Q+ ++ V + N N P++ +R ++M + + G + ++ G +
Sbjct: 186 NAWYVQNWVSKVTR--VGNINYPTEARRAGIYGTLRMLVSMKKDGTIKELAILESSGSS- 242
Query: 230 LVRRMLRENARKAVIKSQAFRLSPSTYKS 258
+L + A + V + F P +
Sbjct: 243 ----VLDDAAIRIVRMAAPFAPFPDEMRE 267
>gi|120556670|ref|YP_961021.1| TonB family protein [Marinobacter aquaeolei VT8]
gi|120326519|gb|ABM20834.1| TonB family protein [Marinobacter aquaeolei VT8]
Length = 288
Score = 83.8 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 34/269 (12%), Positives = 79/269 (29%), Gaps = 23/269 (8%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPV 61
R L +++ +H M +L P S + + + +D + +
Sbjct: 10 RFSFTLFMALAVHAMLVL----GITFAPESPRSSAQTMEITLSQFDDEQAPEKADFLAQT 65
Query: 62 VQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGE-----------QAL 110
Q S+E + S + + + T R + QA
Sbjct: 66 SQQGSGSEEQAMEMTSPNPSEISQPELAQVQPEPQTTTRPQPQQKRAVVQTETRTERQAS 125
Query: 111 KESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSR 170
+ P + + + ++ + +P + + S
Sbjct: 126 RPEERTEPQEEPLPQSEKKSLMERSLEIASLEARFDAQQRAYARKPRVMRVTAASTLKSS 185
Query: 171 KRIPSQDAIAIVRNRVIANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKINVDVVGGTE 229
Q+ ++ V + N N P++ ++ ++M L + G + + G T
Sbjct: 186 NAWYVQNWVSKVTR--VGNINYPTEARQAGIYGTLRMLVSLKKDGTIKEVAILQSSGST- 242
Query: 230 LVRRMLRENARKAVIKSQAFRLSPSTYKS 258
+L + A + V + F P +
Sbjct: 243 ----VLDDAAIRIVRMAAPFAPFPEEMRQ 267
>gi|163742235|ref|ZP_02149623.1| tonB domain protein, putative [Phaeobacter gallaeciensis 2.10]
gi|161384565|gb|EDQ08946.1| tonB domain protein, putative [Phaeobacter gallaeciensis 2.10]
Length = 379
Score = 83.4 bits (204), Expect = 3e-14, Method: Composition-based stats.
Identities = 29/230 (12%), Positives = 62/230 (26%), Gaps = 4/230 (1%)
Query: 46 NEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSK 105
+ + + + + + + + + E + +
Sbjct: 147 VAPTPVAPPEPDTQIADVAQPEVSDEVGTEPAQESQQATAEAAANDRIVTEEVEAETDQV 206
Query: 106 GEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKV 165
A +S R + + + + ++ +
Sbjct: 207 ASAAPAQSLRPRRRPDRPEPVAQPEPEPAAAEPETAPSPDRSDAVEDALAAALAGGGEVE 266
Query: 166 EKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVL--GKINVD 223
+ +R V WN+ S + V + L Q G +
Sbjct: 267 APEPSGPPLTSGEKDALRVAVQQCWNVGSLSSEALRTTVVVSVALTQDGRPEEGSIRMLS 326
Query: 224 VVGGTELVRRMLRENARKAVIKSQA--FRLSPSTYKSWRNITLFFVPSKM 271
GG+ AR+A+++ A F+L Y WRNI + F P +M
Sbjct: 327 STGGSGSAANQAFGAARRAILRCGARGFQLPSDKYAQWRNIEMTFNPERM 376
Score = 45.3 bits (105), Expect = 0.008, Method: Composition-based stats.
Identities = 14/194 (7%), Positives = 48/194 (24%), Gaps = 14/194 (7%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLV-PISRREMLSVDNIYNEDYHSSKYKKIEEPV 61
++ G IS+ H + + F P++ +++ + + + +
Sbjct: 1 MQTGTKISVAGHALLAGWVVFGAWFPSEPLPLAVQDVALISSEEFAKLSQQRAAPVVADT 60
Query: 62 VQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMP-- 119
+ + + D T+ + S+ + +
Sbjct: 61 AGDLTQPEPEPRPELTSPPEPDPEPQITQPEPVTPPEPDAELSERPEPQPVEPAPPVAAP 120
Query: 120 -----------VSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKS 168
++ + ++ I V E+ ++ +
Sbjct: 121 TPPDVPDATTVTPQLTERSQLRPVDRVAPTPVAPPEPDTQIADVAQPEVSDEVGTEPAQE 180
Query: 169 SRKRIPSQDAIAIV 182
S++ A +
Sbjct: 181 SQQATAEAAANDRI 194
>gi|89068041|ref|ZP_01155458.1| Possible TolA protein [Oceanicola granulosus HTCC2516]
gi|89046280|gb|EAR52337.1| Possible TolA protein [Oceanicola granulosus HTCC2516]
Length = 383
Score = 83.0 bits (203), Expect = 4e-14, Method: Composition-based stats.
Identities = 33/184 (17%), Positives = 59/184 (32%), Gaps = 8/184 (4%)
Query: 93 ATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTV 152
+ S+ + P P ++ ++ A+++ +
Sbjct: 199 TEADRPAASAPDASLRPRVRPDRPEPPAPPRTEETVTTASSEAAAEEPEVDEAAVDDAVA 258
Query: 153 VVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQ 212
+ + + S R V WN+ + ++ V + F L+
Sbjct: 259 AALAAASAVEAPSTPVPQGPPMSGAEQEGFRLAVRECWNVDAG-SEAARVVVTVGFGLSP 317
Query: 213 KGFVLG-KINVDVVGGTELVRRMLRENARKAVIKSQ------AFRLSPSTYKSWRNITLF 265
G V G V G E R E AR+AV++ Q + L P Y SWR + +
Sbjct: 318 AGRVEGDVRLVSASDGPEGARSAAFEAARRAVLRCQNDNGRSGYDLPPEKYDSWREVEMT 377
Query: 266 FVPS 269
F P
Sbjct: 378 FDPR 381
>gi|89053463|ref|YP_508914.1| CheA signal transduction histidine kinase [Jannaschia sp. CCS1]
gi|88863012|gb|ABD53889.1| Cell division and transport-associated protein TolA [Jannaschia sp.
CCS1]
Length = 393
Score = 83.0 bits (203), Expect = 4e-14, Method: Composition-based stats.
Identities = 34/248 (13%), Positives = 72/248 (29%), Gaps = 24/248 (9%)
Query: 48 DYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGE 107
+ + + P+ + + +++ + E D + + E ++ +
Sbjct: 143 PEDAPRVAPVAAPLPEPDVETAPDVLEQTTEPEVADDAAVEDTPETAPEEATTEIVTEAD 202
Query: 108 QALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDK--------- 158
+ V P + + D+ + E + +
Sbjct: 203 EPAAAPLGPTSSVRPTARPSRPAPVEQPVDVAADAVEETPAETAAETAVETPTEEVDPLA 262
Query: 159 -----------KELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMH 207
+ + SQ R V A WN+ + V +
Sbjct: 263 AAIAGAVAEAVETPDPTPAPAPSGPPLSQGVRDGFRVAVQACWNVGALSTEALGTTVVVA 322
Query: 208 FQLNQKGFVLG--KINVDVVGGTELVRRMLRENARKAVIKS--QAFRLSPSTYKSWRNIT 263
F + + ++ GG+++ R E AR+A+I+ F L +Y W I
Sbjct: 323 FDMARDARPDAGTIRMIEFSGGSDVAARQAYEAARRAIIRCGANGFNLPLESYDRWSQIE 382
Query: 264 LFFVPSKM 271
L F P M
Sbjct: 383 LVFNPEGM 390
>gi|302879782|ref|YP_003848346.1| protein TolA [Gallionella capsiferriformans ES-2]
gi|302582571|gb|ADL56582.1| protein TolA [Gallionella capsiferriformans ES-2]
Length = 243
Score = 83.0 bits (203), Expect = 4e-14, Method: Composition-based stats.
Identities = 35/263 (13%), Positives = 78/263 (29%), Gaps = 40/263 (15%)
Query: 8 AISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGS 67
+++++H FL LLYF F+ Q P+ ++SV+ + +
Sbjct: 16 LLAVLVHGAFLALLYFGFSWQTEPPV----VMSVELWQSMPDSAPATPVEARVEEVAPVE 71
Query: 68 SQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQK 127
+ + + V + + K E K + +K+ ++ +
Sbjct: 72 PEVEIKPEIVVPDKKPEKKPEKKPEIKPPEKKPEIKPVVKPEVKKPLDVKKTAPQPAQPS 131
Query: 128 ISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVI 187
++ K + + + + ++ ++
Sbjct: 132 AAEQQAARD---------------------------KATQEAATGRVVDEFVGKIQGKIR 164
Query: 188 ANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQ 247
N P D K+ R + + G VL + G +A++KS
Sbjct: 165 RNVVEPPDV--SKEARAEFLVTVLPGGRVLPPRLLKSSGN-----PAYDNAVERAILKSD 217
Query: 248 AFRLSPS--TYKSWRNITLFFVP 268
L + +R + L F P
Sbjct: 218 PLPLPADAALFNRFRELKLGFQP 240
>gi|85706712|ref|ZP_01037804.1| tonB domain protein, putative [Roseovarius sp. 217]
gi|85668770|gb|EAQ23639.1| tonB domain protein, putative [Roseovarius sp. 217]
Length = 381
Score = 82.6 bits (202), Expect = 5e-14, Method: Composition-based stats.
Identities = 34/249 (13%), Positives = 68/249 (27%), Gaps = 10/249 (4%)
Query: 33 ISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTH 92
+ E+ + + EP V+ +Q ++ D + +
Sbjct: 130 VVVPEVSPRPKPRPVPRVAPEAVAPPEPDVRIDDVAQPDVTPDQGAEVQEEPSEATAPEE 189
Query: 93 ATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTV 152
A + + P P ++ + + + +
Sbjct: 190 AATEIVTEAEEPEQSAPTSSLRPKPRPARPVEQAETPAPAETPEPAATETPKPTATAPAT 249
Query: 153 VVRPDKKEL------LSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKM 206
L + + + + +R V WN+ S V +
Sbjct: 250 DQSAVNDALAAALGASQQTDTAPSGPPLTSGEKDALRVAVQQCWNVGSLSTEALGTTVVV 309
Query: 207 HFQLNQKGFVL--GKINVDVVGGTELVRRMLRENARKAVIKS--QAFRLSPSTYKSWRNI 262
++ + G GG + R E AR+A+I+ F L Y WR+I
Sbjct: 310 SVRMGEDGRPDNGSIRMDSFSGGADAAARQAFEAARRAIIRCGANGFNLPADKYDQWRDI 369
Query: 263 TLFFVPSKM 271
+ F P M
Sbjct: 370 EMTFNPESM 378
Score = 36.4 bits (82), Expect = 4.8, Method: Composition-based stats.
Identities = 18/193 (9%), Positives = 43/193 (22%), Gaps = 16/193 (8%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
+ G IS H+ + F + P E++ I ED+ + + V
Sbjct: 1 MNTGQIISGAGHLALISWALFGGVFRSDPP--PFEVVEATTISTEDFAALVARSTSPEAV 58
Query: 63 QFKGS--------------SQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQ 108
+ S + + + + +E + +
Sbjct: 59 ANIDTPEPPAPGDAAPPLASTPDAAPESTPPDAQQSVPPDPAPDVSEITPPAPAEVEDTA 118
Query: 109 ALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKS 168
+ + + V + K + + + V E
Sbjct: 119 PVMDVPQEDVAVVVPEVSPRPKPRPVPRVAPEAVAPPEPDVRIDDVAQPDVTPDQGAEVQ 178
Query: 169 SRKRIPSQDAIAI 181
+ A
Sbjct: 179 EEPSEATAPEEAA 191
>gi|254468580|ref|ZP_05081986.1| protein TolA [beta proteobacterium KB13]
gi|207087390|gb|EDZ64673.1| protein TolA [beta proteobacterium KB13]
Length = 273
Score = 82.6 bits (202), Expect = 5e-14, Method: Composition-based stats.
Identities = 29/271 (10%), Positives = 91/271 (33%), Gaps = 10/271 (3%)
Query: 1 MRLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP 60
+ L++ L S+++H+ L ++ F P E+ + + + K ++
Sbjct: 7 INLQSNLF-SLLIHLSILFVMIFTVQWSPQYPY-FGEVELWEAVPTVKEQAQTPPKPKQV 64
Query: 61 VVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPV 120
S + + + + + E + + ++ LK+ + ++
Sbjct: 65 EPAKAEKSIPKVNQQIKDTQAEINLKKKKEKELAEKKKQEQIKKIQQELLKQEQIKQLQD 124
Query: 121 SPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIA 180
++++ K + + + ++ + + ++ + + A
Sbjct: 125 QLLQQEQLEKLQKELLEQDAQNADQEIISEDKKKSERIAIQADQDMEAGKNKSEIDKYKA 184
Query: 181 IVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENAR 240
+++ ++ N + ++ L + L G +L + G E
Sbjct: 185 LIQQKIQQN--VNNNLCGLDYLSLSFEITLLPSGELLNDPVLKNSSGNLS----CDEAVE 238
Query: 241 KAVIKSQAFRLS--PSTYKSWRNITLFFVPS 269
+A+ +S+ + P + + I L F P+
Sbjct: 239 RAIYQSEPLPVPTDPKIFTKLKKIKLKFYPN 269
>gi|121997728|ref|YP_001002515.1| TonB family protein [Halorhodospira halophila SL1]
gi|121589133|gb|ABM61713.1| outer membrane transport energization protein TonB [Halorhodospira
halophila SL1]
Length = 288
Score = 82.3 bits (201), Expect = 7e-14, Method: Composition-based stats.
Identities = 40/258 (15%), Positives = 83/258 (32%), Gaps = 17/258 (6%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPV 61
RL L +++++H + +L + + + S M+ V Y+E + +
Sbjct: 17 RLGMALFLAVVVHALLILGVGLTWEGEERP--SETSMMEVTLAYDEAETPPEEADYLADL 74
Query: 62 VQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVS 121
Q G V + + + T A E ++ +AL ES P
Sbjct: 75 DQDGGG-----VAEQAQIPSPLAGEPTPATEAPEPGEPAATPEARAEALIESEQAETPTP 129
Query: 122 PYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRP--DKKELLSKVEKSSRKRIPSQDAI 179
P D + ++ QDL + + + +E + + + + +
Sbjct: 130 PTDDETQAEERPSLQDLLDSRREAAAAEAVALQQRLSQPREPSKRFLNARTRSHEAAAYM 189
Query: 180 AIVRNRVIANWNIPSDFKRFKKL---RVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLR 236
+V A N+ + ++ R+ + L G + V R+L
Sbjct: 190 EAWTRKVEAVGNLNYPSEARERGLSGRLILEVTLMPDGSLEDVRIVQRSR-----HRLLD 244
Query: 237 ENARKAVIKSQAFRLSPS 254
E A + V + P
Sbjct: 245 EAAVRIVRLGAPYPDIPE 262
>gi|315498694|ref|YP_004087498.1| tola protein [Asticcacaulis excentricus CB 48]
gi|315416706|gb|ADU13347.1| TolA protein [Asticcacaulis excentricus CB 48]
Length = 268
Score = 82.3 bits (201), Expect = 7e-14, Method: Composition-based stats.
Identities = 35/266 (13%), Positives = 71/266 (26%), Gaps = 7/266 (2%)
Query: 1 MRLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP 60
M++ L S++LH L L + N+N + V + S ++E
Sbjct: 1 MKMGRALIGSLLLHAGVLALAFLNWNTL--PDAKPVVSVPVQIVAELPERSMAAAPVDET 58
Query: 61 VVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPV 120
V + + K E + + + A +
Sbjct: 59 AVLEPVPEPAPAEPVPTPEPQPVPTPPAPKQPVPEVKKETKKPEPKKLEPVIPAKTKPDP 118
Query: 121 SPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIA 180
K K S + + + A+
Sbjct: 119 KGTQKPKPQTLDLGALSQYQSSPPKSNTRTPARPTRAP---TDGSSARGSAAADTGPALN 175
Query: 181 IVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENAR 240
+ ++ W+ D ++R + F ++ G V+ + + V + A+
Sbjct: 176 ALTAKLQRLWSPNCDVPGGDQVRAVIAFTISPNGRVIKGPEWENPR-NDPVWQAAAGRAQ 234
Query: 241 KAVIKSQAFRLSPST-YKSWRNITLF 265
AV K + + P Y IT
Sbjct: 235 AAVKKGELYDNLPDGLYNQPLEITFN 260
>gi|126737226|ref|ZP_01752961.1| tonB domain protein, putative [Roseobacter sp. SK209-2-6]
gi|126721811|gb|EBA18514.1| tonB domain protein, putative [Roseobacter sp. SK209-2-6]
Length = 381
Score = 81.9 bits (200), Expect = 9e-14, Method: Composition-based stats.
Identities = 42/245 (17%), Positives = 78/245 (31%), Gaps = 6/245 (2%)
Query: 33 ISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTH 92
++ + + E + + + + +VQ + S+ + QE + +
Sbjct: 134 PEPEQLRPAERVAPEPVAAPEPEVAIDDIVQPEVSTDVGAEAEQEAQEETAEEAASDRIV 193
Query: 93 ATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTV 152
NE + + S LR V P Q + T + L + +
Sbjct: 194 TEANEDEEAELEPAPVVSAPSTSLRPQVRPRRPQAPEQPTEVAEPLDDAESEAQDQASAI 253
Query: 153 VVRPDKKELLSKV--EKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQL 210
+ +R V WN+ S + V++ L
Sbjct: 254 EDALAAAIAGGGEVEAPEPSGPPLTSGEKDALRVAVSKCWNVGSLSSDALRTTVEVSVTL 313
Query: 211 NQKGFVL--GKINVDVVGGTELVRRMLRENARKAVIKSQA--FRLSPSTYKSWRNITLFF 266
+Q G + GG+ + E AR+A+I+ A F+L Y WR + + F
Sbjct: 314 SQDGKPDPGSIRMISSTGGSNSAAKQAYEAARRAIIRCGARGFQLPAEKYSQWREVVMTF 373
Query: 267 VPSKM 271
P KM
Sbjct: 374 NPEKM 378
Score = 40.7 bits (93), Expect = 0.20, Method: Composition-based stats.
Identities = 17/152 (11%), Positives = 43/152 (28%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
++ G IS+ H + + F + + +SV + + + S +
Sbjct: 1 MQTGTKISLAGHGVLMGWAVFGGWFSAAPEAVQVQEVSVISAADFERLSQRPAAPVIAPE 60
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
S E V + + + ++ + + P
Sbjct: 61 PAALSEPEQPVEVPQLNTTAETQVETSQPETVQTPAVEVPPETVPTPDPAPEVAPQPPEI 120
Query: 123 YDKQKISKATNKEQDLQGISFAEKKSIDTVVV 154
D + S + + + AE+ + + V
Sbjct: 121 LDAPESSSIIAALPEPEQLRPAERVAPEPVAA 152
>gi|190570799|ref|YP_001975157.1| hypothetical protein WPa_0360 [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|190357071|emb|CAQ54468.1| hypothetical protein WP0360 [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
Length = 203
Score = 81.5 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 24/170 (14%), Positives = 59/170 (34%), Gaps = 2/170 (1%)
Query: 99 KRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDK 158
K + + + + + + + ++ + ++ + +
Sbjct: 23 KAQTDDSSVIPIPQRKKELVELVQPRQIIEIQEIDEGIPIPKRKKGVERKLREDIKEVKN 82
Query: 159 KELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLG 218
+ K ++ + + I +R+++ W IP + +K++ L+ KG ++
Sbjct: 83 EIRDKKNIENKDDELAVTEIINSIRDKLTECWRIPESIVYKENFSIKINLLLSSKGEIVV 142
Query: 219 KINVDVVGG-TELVRRMLRENARKAVIKSQAF-RLSPSTYKSWRNITLFF 266
D + R +NA +AV K L + WR +TL F
Sbjct: 143 ANVADSSSYQNNPLFRSAADNAMRAVYKCSPLIGLPAEQHHIWREVTLDF 192
>gi|254465856|ref|ZP_05079267.1| TolA family protein [Rhodobacterales bacterium Y4I]
gi|206686764|gb|EDZ47246.1| TolA family protein [Rhodobacterales bacterium Y4I]
Length = 373
Score = 81.5 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 34/221 (15%), Positives = 70/221 (31%), Gaps = 6/221 (2%)
Query: 57 IEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALL 116
++ V +G+ E V++ + +E + + + + + S
Sbjct: 150 VQPEVAPDEGAKTEQEVQEATAREAASDRIVTEENEGEDIAASAAPAVSKRPVTRPSRPK 209
Query: 117 RMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKV--EKSSRKRIP 174
P + ++ ++ + + V + +
Sbjct: 210 PQPEPETQVTEAAQPAKPKEPEEPEEPEPSGTSSAVADALAEALAGGADVEDPEPSGPPL 269
Query: 175 SQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVL--GKINVDVVGGTELVR 232
+ +R V WN+ S K V + L Q G + GG
Sbjct: 270 TLGEKDALRVAVSQCWNVGSLSTDALKTTVVVAVSLAQDGRPDSGSIRMLSSTGGASSAA 329
Query: 233 RMLRENARKAVIKSQA--FRLSPSTYKSWRNITLFFVPSKM 271
+ + AR+A+I+ A F+L Y WR+I + F P +M
Sbjct: 330 QQAFDAARRAIIRCGAGGFQLPAEKYAQWRDIEMTFNPERM 370
>gi|192360351|ref|YP_001981530.1| putative biopolymer transport protein TolA [Cellvibrio japonicus
Ueda107]
gi|190686516|gb|ACE84194.1| putative biopolymer transport protein TolA [Cellvibrio japonicus
Ueda107]
Length = 279
Score = 81.5 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 33/279 (11%), Positives = 90/279 (32%), Gaps = 16/279 (5%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPV 61
R + S++LH + L+L + ++ V + +K +
Sbjct: 6 RFTLPVLFSVVLHALILVLFFGDWGFFRTKEPEPVPPRYVTATLVDLQPKAKAAPPQPKE 65
Query: 62 VQFKGSSQENLV----RDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLR 117
E+L R+ ++ + + K A + + + K ++ + A +
Sbjct: 66 QNLDAKRFEDLKNLKNREEQKRKEAEAQVQRQKEQAAKEAAAKEEALKQQKLKDQQAKVA 125
Query: 118 MPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQD 177
+ +++K + ++ + + E+++ + + + + K +
Sbjct: 126 REKAEAERKKKLEEERRKAEAEQKRKREQEAQEEIRRQQAAYQKEEKHLSDTADDASVIS 185
Query: 178 AIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRE 237
++ RV N++ P + + + G V+G G
Sbjct: 186 YNELLARRVGENFSPPPSARL--GMVSVFIIDMLPNGQVVGVALSRSSGND-----AFDR 238
Query: 238 NARKAVIKSQAF----RLSPSTYKS-WRNITLFFVPSKM 271
A +A+ + F + ++ +R T F P +
Sbjct: 239 AAEQAIRRVDRFVEIKDIPIDVFERNFRRFTFTFDPKDL 277
>gi|85715470|ref|ZP_01046451.1| hypothetical protein NB311A_17234 [Nitrobacter sp. Nb-311A]
gi|85697665|gb|EAQ35541.1| hypothetical protein NB311A_17234 [Nitrobacter sp. Nb-311A]
Length = 227
Score = 81.5 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 19/198 (9%), Positives = 49/198 (24%), Gaps = 2/198 (1%)
Query: 74 RDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATN 133
+ ++ +++ + + + + A
Sbjct: 27 AEAPPFDDVPPRLMAVDIVSSKEIHSPAKEDLPKPSQTNPPDSFDSPDNKPQADTKAAEI 86
Query: 134 KEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIP 193
++ P + + + S A R +P
Sbjct: 87 PPPSSDAPEPDISSKYGVLLGFPASQTDDDSGAAEAIRADISAMDTAQFRRHFKTCSKMP 146
Query: 194 SDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRL-S 252
+ +R+ + G + + + L + A KA++ Q + +
Sbjct: 147 ASVSPSDNIRIVLRVPFTIDGTIAAPPALIEASASAKGL-ALMKGAIKALMACQPYAMFP 205
Query: 253 PSTYKSWRNITLFFVPSK 270
P Y W+ + L F P
Sbjct: 206 PDKYDQWKVLDLSFTPRD 223
>gi|206602337|gb|EDZ38818.1| Probable TonB family protein [Leptospirillum sp. Group II '5-way
CG']
Length = 278
Score = 81.1 bits (198), Expect = 1e-13, Method: Composition-based stats.
Identities = 37/256 (14%), Positives = 75/256 (29%), Gaps = 14/256 (5%)
Query: 7 LAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIY-NEDYHSSKYKKIEEPVVQFK 65
L +S+ +H + + L F Q E +V+ + + P+ +
Sbjct: 18 LFLSLSVHAVLVSFLLF---YQSNKSKGFPEATTVELVSSLPPSKTLPLPVPVHPLKKAP 74
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
+ VR + + R K A + +
Sbjct: 75 LPRPVHPVRGSRPVPHLQVVKKAPIPIVRKRTPIRKIHQKKVIAPPKMVHRLKKKKTPHR 134
Query: 126 QKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNR 185
+ ++ + + + +K + V+ ++ +R
Sbjct: 135 KVVASHPVRVKTAKASPVPQKPVLH---PSRVSNPHPVPVKMDISGETFPTFLEHLLISR 191
Query: 186 VIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIK 245
+ +NW P + LR + F L + G V + V G M + AR AV++
Sbjct: 192 IKSNWFPPPGTRG---LRATIQFTLLKDGRVSDQPVVIGSSGNG----MFDDAARMAVLR 244
Query: 246 SQAFRLSPSTYKSWRN 261
S F P Y +
Sbjct: 245 SVPFPPFPPGYSKDQE 260
>gi|82523889|emb|CAI78612.1| periplasmic protein TonB [uncultured delta proteobacterium]
Length = 274
Score = 81.1 bits (198), Expect = 1e-13, Method: Composition-based stats.
Identities = 39/274 (14%), Positives = 80/274 (29%), Gaps = 22/274 (8%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKK---IEE 59
L L S+ LH L+L + I + SV+ + S K
Sbjct: 14 LWVNLIFSIALHCTVLILYFVLQPN--KHMIDLSMVYSVELVSFTTDTSINNKSYNMNNS 71
Query: 60 PVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMP 119
S Q + + S+ N ++ + + K E +K + P
Sbjct: 72 KNPNMIDSRQTRITQRISLGNNKASLKNEELKKISIKTPVILNQEKTENFVKNAIENLQP 131
Query: 120 VSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAI 179
++ + + + K++ + Q
Sbjct: 132 LTGQP--------ENTNNNTTEINKGTIINNNTTGINKGTITNNNSGKATDDDLQLQIYY 183
Query: 180 AIVRNRVIANWNIPSD-FKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLREN 238
+ + +NW I D ++ K L + ++ + G + G T ++
Sbjct: 184 NKIWEMIRSNWTISDDILEQVKGLEAVIILKILKDGTINDFWFETRSGNT-----FFDQS 238
Query: 239 ARKAVIKSQAFRLSP--STYKSWRNITLFFVPSK 270
A +A+ KS +++ I + F P K
Sbjct: 239 AVRAIQKSSPLPPLSWFKAMENY-EIGIRFKPEK 271
>gi|254510110|ref|ZP_05122177.1| possible TolA protein [Rhodobacteraceae bacterium KLH11]
gi|221533821|gb|EEE36809.1| possible TolA protein [Rhodobacteraceae bacterium KLH11]
Length = 365
Score = 81.1 bits (198), Expect = 1e-13, Method: Composition-based stats.
Identities = 32/249 (12%), Positives = 64/249 (25%), Gaps = 29/249 (11%)
Query: 52 SKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSS-------- 103
+ E + S + + + +
Sbjct: 114 IEQPPTLEEPEVAALPVPPGPEAEPSPADKIAPEQIAPPPPEAKPDDIETPPVSLEDGAE 173
Query: 104 -----SKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDK 158
+ + + D + + + +
Sbjct: 174 TQQEQQDQTAPEEAAPEIVTEAEEVDDPAPRTSPRPRVRPNRPAPPPEPEVAETPEPAPS 233
Query: 159 KELLSKVEKSS------------RKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKM 206
+ S+ + + +R V WN+ S + V +
Sbjct: 234 EPAQSEQAINDALAEALGNGTEPSGPPLTSGEKDAMRVAVSRCWNVGSLSTDALQTVVVV 293
Query: 207 HFQLNQKGFVLG--KINVDVVGGTELVRRMLRENARKAVIKSQA--FRLSPSTYKSWRNI 262
F L G V+G +D GGT + E AR+AV++ A + L Y W++I
Sbjct: 294 GFSLTPDGKVVGGSLRMLDSSGGTSASAKQAYEAARRAVLRCGAKGYDLPADKYSQWQDI 353
Query: 263 TLFFVPSKM 271
+ F P +M
Sbjct: 354 EITFNPERM 362
Score = 43.7 bits (101), Expect = 0.030, Method: Composition-based stats.
Identities = 19/159 (11%), Positives = 45/159 (28%), Gaps = 3/159 (1%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
++ G IS I HV + F + + +SV + E + + ++ V
Sbjct: 1 MDTGTKISAIAHVSLIGWALFGGTFRSEPLPMAVQDISV--VSAEQFAAMTAQRNAPEVP 58
Query: 63 QFKGSSQENLVRDFSVQENG-DRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVS 121
Q D +++ A + L
Sbjct: 59 ADPADLQPPAEPDEVETPAPTAEQPPESEPVAQPEPEPEPEIEPEAVEIAPEPELIEQPP 118
Query: 122 PYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKE 160
++ +++ S A+K + + + P + +
Sbjct: 119 TLEEPEVAALPVPPGPEAEPSPADKIAPEQIAPPPPEAK 157
>gi|311696402|gb|ADP99275.1| TonB family protein [marine bacterium HP15]
Length = 288
Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 29/269 (10%), Positives = 77/269 (28%), Gaps = 23/269 (8%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPV 61
R L +++ +H + +L P S + + + +D + +
Sbjct: 10 RFSFTLFMALAVHAIVVL----GITFAPEPPRSSAQTMEITLSQFDDEEAPEKADFLAQT 65
Query: 62 VQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVS 121
Q ++E + + Q + + +Q ++ + V
Sbjct: 66 SQKGSGTEEEVREMTTPQPAEVSQPQVAQVQPEPPAQTEPQPRQEKQVVQTESSSSQKVR 125
Query: 122 P-----------YDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSR 170
++ + ++ + +P + + S
Sbjct: 126 QPEERTRPEEEPLPVREKKSLMERSLEIASLEARFDAQQQAYARKPRVMRVTAASTLKST 185
Query: 171 KRIPSQDAIAIVRNRVIANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKINVDVVGGTE 229
Q+ ++ V + N N P++ + ++M L + G + + G T
Sbjct: 186 NAWYVQNWVSKVTR--VGNINYPTEARNAGIYGTLRMLVSLKKDGTIKEVAILQSSGST- 242
Query: 230 LVRRMLRENARKAVIKSQAFRLSPSTYKS 258
+L + A + V + F P +
Sbjct: 243 ----VLDDAAIRIVRMASPFAPFPDEMRK 267
>gi|260429033|ref|ZP_05783010.1| possible TolA protein [Citreicella sp. SE45]
gi|260419656|gb|EEX12909.1| possible TolA protein [Citreicella sp. SE45]
Length = 397
Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 33/245 (13%), Positives = 73/245 (29%), Gaps = 11/245 (4%)
Query: 31 VPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTK 90
V + + + V + + ++ V E +T
Sbjct: 157 PEPVAPPEEDVTVAEETQQAADPESESPDVVEEEQEATAPEETATEIVTEA------ETP 210
Query: 91 THATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSID 150
+ +++ R + + A + P P +Q S++T + + +
Sbjct: 211 AASAPSQSVRPRTRPSDIASRSEPEPETPARPEPEQPASESTASTPAAEPEPADDAVADA 270
Query: 151 TVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQL 210
S + ++ +R V W + + V + +
Sbjct: 271 IAEALAAGGGGGSTSSDAPSGPPLTRGEQDALRLAVQRCWIVDVG-SEAANVTVTVSMDM 329
Query: 211 NQKGFVLGK--INVDVVGGTELVRRMLRENARKAVIKSQ--AFRLSPSTYKSWRNITLFF 266
G V+ V GG+ + AR+A+++ Q + L Y+ W+ I + F
Sbjct: 330 EPSGQVVSSSLKLVGSSGGSSSAADTAFQAARRAILRCQGAGYELPQDKYQQWKRIEMTF 389
Query: 267 VPSKM 271
P M
Sbjct: 390 NPDDM 394
>gi|329893684|ref|ZP_08269818.1| TolA protein [gamma proteobacterium IMCC3088]
gi|328923611|gb|EGG30923.1| TolA protein [gamma proteobacterium IMCC3088]
Length = 250
Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 42/271 (15%), Positives = 88/271 (32%), Gaps = 47/271 (17%)
Query: 9 ISMILHVMFLLLLYFNFNVQLL---VPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
+++++H + LL+L N+N + +++S + SK K+ V+ +
Sbjct: 17 VTVVIHGLGLLMLLINWNSVIPEYYETTKPTQVISAKLVDVASIPKSKPKRSITDVIPNR 76
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
S+QE + + T ET + + +
Sbjct: 77 PSTQELNQQSQQINTKPIDTKVSAATPVIPKETVAPGAQPKTPNPAQR---------FTA 127
Query: 126 QKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNR 185
+++++ T D + + D + A++R
Sbjct: 128 EELARLTKTNIDQSLAAEGDSSEQD-----------------------LTASYTALIRQT 164
Query: 186 VIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIK 245
V+ W+ P + ++ + QL G ++G V G +A AV K
Sbjct: 165 VVNYWSRPPSAR--NGMQTVLQLQLIPTGDIVGVTVVQSSGDA-----AFDRSAVNAVEK 217
Query: 246 SQAFR----LSPSTYKS-WRNITLFFVPSKM 271
+ F L P ++ +R L F P +
Sbjct: 218 AARFPELQKLPPREFEKTFRRFKLLFKPEDL 248
>gi|254477283|ref|ZP_05090669.1| possible TolA protein [Ruegeria sp. R11]
gi|214031526|gb|EEB72361.1| possible TolA protein [Ruegeria sp. R11]
Length = 388
Score = 80.7 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 38/250 (15%), Positives = 69/250 (27%), Gaps = 9/250 (3%)
Query: 26 NVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRF 85
+ P I + E + + E D V E +
Sbjct: 141 PTDRVAPTPVAPPEPDVRIDDVAQPEIATAPGSETNQDAQEETAEAAANDRIVTEETEAD 200
Query: 86 SDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAE 145
+DQ + A E + + E P + ++ + +
Sbjct: 201 TDQVASAAPERSLRPQARPNRPAPTPEPEP-----DPAPQTTAAREPEPAAPSEPEPRED 255
Query: 146 KKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVK 205
+ + + V + +R V WN+ S + V
Sbjct: 256 RAAAVEDALAAALAGGGDVVAPEPSGPPLTSGEREALRLVVQNCWNVGSLSSEALRTTVV 315
Query: 206 MHFQLNQKGFVL--GKINVDVVGGTELVRRMLRENARKAVIKSQA--FRLSPSTYKSWRN 261
+ L G + GG+ AR+A+++ A F+L Y WRN
Sbjct: 316 VALSLTPDGRPEEGSIRLLSSTGGSGAAANQAFGAARRAILRCGARGFQLPSDKYAQWRN 375
Query: 262 ITLFFVPSKM 271
I + F P +M
Sbjct: 376 IEMTFNPERM 385
>gi|83943917|ref|ZP_00956374.1| tonB domain protein, putative [Sulfitobacter sp. EE-36]
gi|83845164|gb|EAP83044.1| tonB domain protein, putative [Sulfitobacter sp. EE-36]
Length = 387
Score = 80.7 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 41/256 (16%), Positives = 79/256 (30%), Gaps = 10/256 (3%)
Query: 26 NVQLLVPISRREMLSVDNIYNEDYHSS---KYKKIEEPVVQFKGSSQENLVRDFSVQENG 82
V + P+ R V+ E + + P + +QE + + +
Sbjct: 129 PVAVPRPVERVAPEPVEAPDPEARTDDVLREAATPDAPAEKVVEEAQEATAPEEATTQIV 188
Query: 83 DRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGIS 142
++ K T++ + A P K K + + +
Sbjct: 189 TEATEAPKASPTQSARPPARRPTPPAPQVAEAPAETPKPEAPKPATPKPETPKPEAPKPT 248
Query: 143 FAEKKSIDTVVVRPDK---KELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRF 199
D V + + + S +R V + WN+ S
Sbjct: 249 PEPTTDKDAVAAALAEAMGETDAPATPAAPSGPPLSAGEKESLRVAVSSCWNVGSLSSEA 308
Query: 200 KKLRVKMHFQLNQKGFVL--GKINVDVVGGTELVRRMLRENARKAVIKSQA--FRLSPST 255
+ V + +NQ G GG++ E AR+A+I+ A ++L
Sbjct: 309 LRTTVVVSVAMNQDGTPQTNSIKMTSSSGGSQGAANQAFEAARRAIIRCGARGYQLPVEK 368
Query: 256 YKSWRNITLFFVPSKM 271
+ W+NI + F P +M
Sbjct: 369 FGQWQNIEMTFNPERM 384
>gi|83954490|ref|ZP_00963201.1| tonB domain protein, putative [Sulfitobacter sp. NAS-14.1]
gi|83840774|gb|EAP79945.1| tonB domain protein, putative [Sulfitobacter sp. NAS-14.1]
Length = 389
Score = 80.7 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 41/256 (16%), Positives = 79/256 (30%), Gaps = 10/256 (3%)
Query: 26 NVQLLVPISRREMLSVDNIYNEDYHSS---KYKKIEEPVVQFKGSSQENLVRDFSVQENG 82
V + P+ R V+ E + + P + +QE + + +
Sbjct: 131 PVAVPRPVERVAPEPVEAPDPEARTDDVLREAATPDAPADKVVEEAQEATAPEEATTQIV 190
Query: 83 DRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGIS 142
++ K T++ + A P K K + + +
Sbjct: 191 TEATEAPKASPTQSARPPARRPTPPAPQVAEAPAETPKPETPKPATPKPETPKPEAPKPT 250
Query: 143 FAEKKSIDTVVVRPDK---KELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRF 199
D V + + + S +R V + WN+ S
Sbjct: 251 PEPTTDKDAVAAALAEAMGETDAPATPAAPSGPPLSAGEKESLRVAVSSCWNVGSLSSEA 310
Query: 200 KKLRVKMHFQLNQKGFVL--GKINVDVVGGTELVRRMLRENARKAVIKSQA--FRLSPST 255
+ V + +NQ G GG++ E AR+A+I+ A ++L
Sbjct: 311 LRTTVVVSVAMNQDGTPQTNSIKMTSSSGGSQGAANQAFEAARRAIIRCGARGYQLPVEK 370
Query: 256 YKSWRNITLFFVPSKM 271
+ W+NI + F P +M
Sbjct: 371 FGQWQNIEMTFNPERM 386
>gi|39934771|ref|NP_947047.1| hypothetical protein RPA1701 [Rhodopseudomonas palustris CGA009]
gi|39648621|emb|CAE27142.1| conserved hypothetical protein [Rhodopseudomonas palustris CGA009]
Length = 256
Score = 80.3 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 33/256 (12%), Positives = 77/256 (30%), Gaps = 4/256 (1%)
Query: 16 MFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRD 75
M + + V + + + V+ + ++ +K E + + + +
Sbjct: 1 MLVGAVLLLAEVHPFAEVPEQR-IEVEVVTADEAPPPVPEKEPESKPVEQPTPNFEVSQT 59
Query: 76 FSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKE 135
+ Q + T ETK + + A P + +
Sbjct: 60 PTEQPKPQQQQPTPATKPQPAETKPPAPAPQPPQQSAQAPTPPPPPQPAPPQPAPPATAA 119
Query: 136 QDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSD 195
I ++ V + S DA+A +R R+ A ++P+
Sbjct: 120 PYPPAIPQEPDITV-KYSVALGLPAEGGFDAPAETVANISADAVAALRKRLKACASLPAG 178
Query: 196 FKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRL-SPS 254
+++ + L G + + + + L + A A+ Q + +
Sbjct: 179 LSPSDNVKIVIRVGLTPDGRLAQEPFLIEASASAK-GPALMKGAISALEACQPYTMLPAD 237
Query: 255 TYKSWRNITLFFVPSK 270
Y+ WR + + F P
Sbjct: 238 KYREWRILDIGFTPQD 253
>gi|307294754|ref|ZP_07574596.1| putative TolA [Sphingobium chlorophenolicum L-1]
gi|306879228|gb|EFN10446.1| putative TolA [Sphingobium chlorophenolicum L-1]
Length = 303
Score = 80.3 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 42/292 (14%), Positives = 86/292 (29%), Gaps = 31/292 (10%)
Query: 6 GLAISMILHVMFLLLLYFNF---NVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
GL ++ HV+ LL F L + ++ VD + + + P V
Sbjct: 8 GLGVATAGHVLLFGLLSSGFLATPNPLKLNSPPMDVSLVDEVALKSTAPQVSTQPPPPSV 67
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHA-----------------------TENETK 99
+ E+ + + + K
Sbjct: 68 APEQGPTEDAAPAPEPEPAPEPTPAPPAPKPAPPKPVTKPAPAKPTPAPPKKDVPAAKPK 127
Query: 100 RSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKK 159
+ + + + + + + S K + + D
Sbjct: 128 PQPAPEKPKPAAAPVKASQKPATKPNAPARASGQGKAEKPRGSLLGKDFLKGIDAEADAP 187
Query: 160 ELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGK 219
+ ++ A +R +V +W PS ++LR + QL++ G ++G+
Sbjct: 188 RKPAPPPAAAMGPAQKAALDAEIRRQVKPHWKSPSGA-DIEQLRTFVDVQLSRDGSIVGQ 246
Query: 220 INVDVVGGTELVRRMLR----ENARKAVIKSQAFRLSPSTYKSWRNITLFFV 267
V G R E A KA+ + F+L P Y W+++ + F
Sbjct: 247 PQVFNTTGITASNRSQVTLHQELAVKAIRLAAPFKLPPDLYDGWKSLRISFD 298
>gi|86359054|ref|YP_470946.1| putative signal peptide protein [Rhizobium etli CFN 42]
gi|86283156|gb|ABC92219.1| putative signal peptide protein [Rhizobium etli CFN 42]
Length = 145
Score = 79.9 bits (195), Expect = 3e-13, Method: Composition-based stats.
Identities = 28/114 (24%), Positives = 61/114 (53%), Gaps = 1/114 (0%)
Query: 159 KELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLG 218
E S+ + + + ++ AI +RN + + +P D K + + H +L++ G V+G
Sbjct: 30 AERKSREDSDQKAPVLTEAAINAMRNAIQDRFFLPGDLKDAGSVHLMFHVRLDKDGRVIG 89
Query: 219 KINVDVVGGTELVRRMLRENARKAVIKSQAFRL-SPSTYKSWRNITLFFVPSKM 271
+V GG+E R+++ + AR+A+I++ + + Y +W+ + L F S++
Sbjct: 90 SPEAEVSGGSERTRKIITDAARRAIIRAAPYTMFPKDKYDAWKEVILNFDASQL 143
>gi|115524210|ref|YP_781121.1| hypothetical protein RPE_2199 [Rhodopseudomonas palustris BisA53]
gi|115518157|gb|ABJ06141.1| conserved hypothetical protein [Rhodopseudomonas palustris BisA53]
Length = 289
Score = 79.9 bits (195), Expect = 3e-13, Method: Composition-based stats.
Identities = 29/239 (12%), Positives = 72/239 (30%), Gaps = 8/239 (3%)
Query: 39 LSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENET 98
++VD + ++ + ++ + S + + +
Sbjct: 49 IAVDIVRADEMPPPQETPSQQQPALDLPQLAPTEQQPASQPASPPESQQTAALDKPQPQQ 108
Query: 99 KRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDK 158
+++ K + + +A T+ + + V++
Sbjct: 109 PQATPEKPQPPPQAAAAPTPQQPAAQAATSPAVTSWPPPMAPPQLPDITERYQVMLGLPT 168
Query: 159 KELLSKVEKSSRK------RIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQ 212
++ S + ++ +R V + +P R K+R+ M L
Sbjct: 169 DDIASTGQAEMGGGEAAESAKIAKSDTERLRAHVRSCSTLPGSVARTDKVRIVMRIALTP 228
Query: 213 KGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAF-RLSPSTYKSWRNITLFFVPSK 270
+G + + + L + A KA+ Q + L Y+ WR + L F P+
Sbjct: 229 QGRLAAPPALIEASASAK-GPALMQAAIKALEACQPYAMLPADKYREWRVLDLGFTPAD 286
>gi|146341468|ref|YP_001206516.1| hypothetical protein BRADO4560 [Bradyrhizobium sp. ORS278]
gi|146194274|emb|CAL78296.1| conserved hypothetical protein [Bradyrhizobium sp. ORS278]
Length = 288
Score = 79.6 bits (194), Expect = 4e-13, Method: Composition-based stats.
Identities = 32/270 (11%), Positives = 79/270 (29%), Gaps = 11/270 (4%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLV--PISRREMLSVDNIYNEDYHSSKYKKIEEPVVQ 63
G+A S++ H++ + + + V+ + VD + P +
Sbjct: 10 GIAASVLAHLLIVGSVVVSTTVRPYELAKTDEIRVDIVDADEPQKTPEPTPAPSPSPELT 69
Query: 64 FKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPY 123
+ L + + +T + + K + S
Sbjct: 70 LPQFAPTTLPAAAAPPPAPPPAAQETTKPTPAAPPVAKQPTSAQTPAKAAKTAAKQESKL 129
Query: 124 DKQKISKATN-----KEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDA 178
+ T + + + + ++ + S+ + + D
Sbjct: 130 AARPPPMPTPTPSYVPPEPDLTVKYGVPLGLPPPLMPLPAAAGADQEVGSTATKTVAADI 189
Query: 179 IAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRM---- 234
A +R R + +P+ R + + K+ L G + + + +
Sbjct: 190 DAALRQRFRSCARLPAGLSRSEDIFAKVLVPLRPDGRLAAEPEFLGGPAKDEEQAAKVLK 249
Query: 235 LRENARKAVIKSQAFRLSPSTYKSWRNITL 264
L + A A+ Q + L P Y+ W+ I +
Sbjct: 250 LSQGAIAALTACQPYPLPPDRYEEWKVIEM 279
>gi|91978078|ref|YP_570737.1| hypothetical protein RPD_3613 [Rhodopseudomonas palustris BisB5]
gi|91684534|gb|ABE40836.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB5]
Length = 304
Score = 79.6 bits (194), Expect = 4e-13, Method: Composition-based stats.
Identities = 31/283 (10%), Positives = 86/283 (30%), Gaps = 16/283 (5%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPV 61
++ G+A+S++ H+ + ++ V+ + + + V+ + ++ + +
Sbjct: 20 QIRAGIAVSVLAHLGLVGIVLLLAEVRPFADVPEQR-IEVEVVTADEAPPPPLPEPKPET 78
Query: 62 VQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVS 121
+ + + E K E E P
Sbjct: 79 KPALDLPEIKPESETKPASPPPEPAAPQPPLKPEPVKPEPKQQKAEAPKPEFKPDLKPEP 138
Query: 122 PYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELL-------------SKVEKS 168
+ + T + ++ P + ++ + +
Sbjct: 139 AKPEAAPPQPTPAASPAPTSAPQAQQPAPFPPAIPQEPDITVRYSVALGLPADPTFDAPA 198
Query: 169 SRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGT 228
S +A+A +R R+ + +P+ +++ + L G + + + +
Sbjct: 199 ETVADISAEAVAALRQRLKSCAALPASVAPSDNVKIVLRVALQPDGRLAQEPVLIEASAS 258
Query: 229 ELVRRMLRENARKAVIKSQAFRLSP-STYKSWRNITLFFVPSK 270
L + A ++ Q + + P YK W+ + L F P
Sbjct: 259 AK-GPALMKGAIDSLTACQPYTMLPVEKYKEWKVLDLGFTPQD 300
>gi|220936070|ref|YP_002514969.1| TonB family protein [Thioalkalivibrio sp. HL-EbGR7]
gi|219997380|gb|ACL73982.1| TonB family protein [Thioalkalivibrio sp. HL-EbGR7]
Length = 292
Score = 79.6 bits (194), Expect = 5e-13, Method: Composition-based stats.
Identities = 28/269 (10%), Positives = 72/269 (26%), Gaps = 19/269 (7%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPV 61
RL L ++ +H + +L + F L V + + + +
Sbjct: 13 RLGLTLFLAAAIHGIVILGVGFGIEFSGRDRT--PPTLDVVLVQTQSPTPPEQTERIAQA 70
Query: 62 VQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVS 121
Q E R + + + + + P
Sbjct: 71 DQQASGQAEEPDRPSAPVTAPLPLPTDGMAPEQATPSAPDPTPAEQTPVLTREQSPTPAP 130
Query: 122 PYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKS-----SRKRIPSQ 176
+ + + + + + + + + + +++ + S +
Sbjct: 131 SPEVVEETPVREQATTDRLVERSLEMARLASELSEERRRYAQRPRVHYIDALSARSAVEA 190
Query: 177 DAIAIVRNRVIANWNIPSDFKRFK---KLRVKMHFQLNQKGFVLGKINVDVVGGTELVRR 233
+ +V N+ + + + ++ +N G VL + G +
Sbjct: 191 SYVDAWVRKVERVGNLNYPDEARRRRLDGTLILNVLINHDGQVLNVQVANSSGE-----Q 245
Query: 234 MLRENARKAVIKSQAFRLSP----STYKS 258
+L + AR+ V S F P Y
Sbjct: 246 VLDDAARRIVELSSPFSPFPVEMRQKYDQ 274
>gi|152998319|ref|YP_001343154.1| TonB family protein [Marinomonas sp. MWYL1]
gi|150839243|gb|ABR73219.1| TonB family protein [Marinomonas sp. MWYL1]
Length = 286
Score = 79.6 bits (194), Expect = 5e-13, Method: Composition-based stats.
Identities = 30/264 (11%), Positives = 80/264 (30%), Gaps = 20/264 (7%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPV 61
+ L I++ H + ++++ F+F +P + + L V + + + I +
Sbjct: 6 KFSIALFIAISFHALMVMIIGFDF----ELPSPKSKTLEVTLVQHTTKAPVEADFIAQAN 61
Query: 62 VQFKGSS-QENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPV 120
Q G+ ++ + + + + +
Sbjct: 62 QQASGTELRKQKLTTTENARFLSDTIQEISPPVQPQLASAEPIDEPSLLATRNQEAVFEI 121
Query: 121 SPYDKQKISKATNK-------EQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRI 173
+ + K + + +D K+ + ++ S K
Sbjct: 122 INESENEPKTLEEKFRGETQIPSHISNDIATLEALLDQQRQAYAKRPRIRRLTSVSAKAA 181
Query: 174 PSQDAIAIVRNRVIANWNIPSDFKRFKK---LRVKMHFQLNQKGFVLGKINVDVVGGTEL 230
+ R R+ NI + + +++ + G+V + G
Sbjct: 182 IDAQYLDDWRRRIERIGNIHYPEEAKRNHLYGELRLAVIIQPNGYVDDIEVLHSSG---- 237
Query: 231 VRRMLRENARKAVIKSQAFRLSPS 254
R+L + A + V ++ F++ PS
Sbjct: 238 -IRVLDDAAMRIVRLAEPFQVFPS 260
>gi|118594343|ref|ZP_01551690.1| translocation protein TolB precursor [Methylophilales bacterium
HTCC2181]
gi|118440121|gb|EAV46748.1| translocation protein TolB precursor [Methylophilales bacterium
HTCC2181]
Length = 285
Score = 79.2 bits (193), Expect = 5e-13, Method: Composition-based stats.
Identities = 34/274 (12%), Positives = 95/274 (34%), Gaps = 20/274 (7%)
Query: 8 AISMILHVMFLLLLYFNFNVQLLVP-ISRREMLSVDNIYNEDYHSSKYKKIE-------- 58
++++H+ + + F+ N Q+ P + E+ + K +
Sbjct: 16 LFTLVIHLALFIFMIFSVNWQVKTPYYAEVELWDAIPTQIKPKPLIKRATPKVQKPQPSI 75
Query: 59 -EPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLR 117
E +V+ K + L + + + + ++ K A E + K + K + L +
Sbjct: 76 AEKIVEAKKDADIQLKKKKAAELKKKKAAELKKKKAAELKKIEQLKKKALEEEKLAELQK 135
Query: 118 MPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQD 177
+ + +K+ K ++ DL+ + + R + ++ + +
Sbjct: 136 RLLEDEEVEKVQKKLLEQDDLERLQEELRNKDLAKETRIAIEG--TQDLVAGTNSGELEK 193
Query: 178 AIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRE 237
A+++ ++ N + L + L G ++G + E +
Sbjct: 194 YKALIQQKIYQN--VNKQLCGLDPLELIFEIVLMPTGDLIGGAKMIKSSKIES----CDQ 247
Query: 238 NARKAVIKSQAFRLSPS--TYKSWRNITLFFVPS 269
+A++++Q + + + + L F P+
Sbjct: 248 AVERAILQAQPLPMPQDNRLFAQLKKLKLKFQPN 281
>gi|114798960|ref|YP_758887.1| hypothetical protein HNE_0153 [Hyphomonas neptunium ATCC 15444]
gi|114739134|gb|ABI77259.1| conserved hypothetical protein [Hyphomonas neptunium ATCC 15444]
Length = 307
Score = 79.2 bits (193), Expect = 5e-13, Method: Composition-based stats.
Identities = 40/307 (13%), Positives = 88/307 (28%), Gaps = 40/307 (13%)
Query: 3 LENGLAISMILHVMFLLLLYFNFN---------------------------------VQL 29
+ GL +S ++H L + ++
Sbjct: 1 MLRGLTVSALVHASVLAMAVVSWPQDTNDCDDQIERLRREQPGISSVEILMQLPQCASSA 60
Query: 30 LVPISRREMLSV-DNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQ 88
+PI E+ + D + + + E + + + + E D
Sbjct: 61 DLPIDFLEIGRISDVAELRKSDTPEPEPEPEAAPEPVEETPPPPEPEAAEPEPEVEVPDP 120
Query: 89 TKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKS 148
+ E ++ K K + + E LQ +E++
Sbjct: 121 REPEPEPVEEPEPKPEPKKEEPKPKPKPVEKPPAKPKDDLDFLDDFESTLQSKRASEQRP 180
Query: 149 IDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHF 208
RP + + + + A +R +++ W D ++ V +
Sbjct: 181 ETQQTDRPVLANSDRDQQGAGERTGATASLQAALRRQIMECWTGVDDLPPEHQIDVVVSV 240
Query: 209 QLNQKGFVLGKINVDVVGGTELVRR--MLRENARKAVIKS---QAFRLSPSTYKSWRNIT 263
+L + G + + + V R + + A AV K +RL Y W++I
Sbjct: 241 KLARDGSLAEAAKLISPR-SRPVGRSGIAVDRALLAVRKCGEIGNYRLPAEDYDLWKDIN 299
Query: 264 LFFVPSK 270
+ P +
Sbjct: 300 VTLGPKQ 306
>gi|84501651|ref|ZP_00999823.1| tonB domain protein, putative [Oceanicola batsensis HTCC2597]
gi|84390272|gb|EAQ02831.1| tonB domain protein, putative [Oceanicola batsensis HTCC2597]
Length = 390
Score = 79.2 bits (193), Expect = 6e-13, Method: Composition-based stats.
Identities = 40/253 (15%), Positives = 76/253 (30%), Gaps = 11/253 (4%)
Query: 24 NFNVQLLVPISRR-EMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENG 82
P+ R ++D S P + + + ++ G
Sbjct: 141 AIPRVAPRPVERPNPDAAIDETPTAPSAPSPDATEARPEEEERAPEEATTEIITEAEDQG 200
Query: 83 DRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGIS 142
D +K + + +++ E P D + + +++D +
Sbjct: 201 DGPPKVSKRPPSGRPVRTAAAEPEPAETPEPEPAPTPEPEPDPEPDPEPVPEQKDAINDA 260
Query: 143 FAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKL 202
+ + V + +R V A WN S +
Sbjct: 261 L------ERALAGSTSTAASDDVPSGPIGPPLTSGERDALRVAVSACWNTGSLSTDALRT 314
Query: 203 RVKMHFQLNQKGFVLG--KINVDVVGGTELVRRMLRENARKAVIKSQA--FRLSPSTYKS 258
V + +++ G + GG R E AR+A+I+ A F L Y+
Sbjct: 315 TVVVGVDMSEDGRPKNDTIRLISSTGGAGDAERQAFEAARRAIIRCGAKGFGLPVDKYEH 374
Query: 259 WRNITLFFVPSKM 271
WR+I + F P KM
Sbjct: 375 WRDIEMTFNPEKM 387
Score = 47.2 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 18/173 (10%), Positives = 40/173 (23%), Gaps = 4/173 (2%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
+ G IS H+ L P E+ V I E+Y + +
Sbjct: 1 MHAGHIISGAGHLALFAWALIG--SFSLPPDDAIEVTDVALISPEEYAALTPAEQPPGAD 58
Query: 63 QFKGSSQENLVRDFSVQ--ENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPV 120
+ + D +Q + A E +S + + ++ +
Sbjct: 59 TEVAELPAPAPAEDASPVTPQADSAPEQAQPEAAEAPQSETSPERPDLTAPQAEVADSTQ 118
Query: 121 SPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRI 173
+ + + + + V + S
Sbjct: 119 EITPPSEDTAVLLPTPSEEAPRAIPRVAPRPVERPNPDAAIDETPTAPSAPSP 171
>gi|213019674|ref|ZP_03335479.1| hypothetical protein C1A_1167 [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
gi|212994715|gb|EEB55358.1| hypothetical protein C1A_1167 [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
Length = 182
Score = 79.2 bits (193), Expect = 6e-13, Method: Composition-based stats.
Identities = 24/170 (14%), Positives = 59/170 (34%), Gaps = 2/170 (1%)
Query: 99 KRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDK 158
K + + + + + + + ++ + ++ + +
Sbjct: 2 KAQTDDSSVIPIPQRKKELVELVQPRQIIEIQEIDEGIPIPKRKKGVERKLREDIKEVKN 61
Query: 159 KELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLG 218
+ K ++ + + I +R+++ W IP + +K++ L+ KG ++
Sbjct: 62 EIRDKKNIENKDDELAVTEIINSIRDKLTECWRIPESIVYKENFSIKINLLLSSKGEIVV 121
Query: 219 KINVDVVGG-TELVRRMLRENARKAVIKSQAF-RLSPSTYKSWRNITLFF 266
D + R +NA +AV K L + WR +TL F
Sbjct: 122 ANVADSSSYQNNPLFRSAADNAMRAVYKCSPLIGLPAEQHHIWREVTLDF 171
>gi|91205082|ref|YP_537437.1| periplasmic protein TonB [Rickettsia bellii RML369-C]
gi|157827581|ref|YP_001496645.1| periplasmic protein TonB [Rickettsia bellii OSU 85-389]
gi|91068626|gb|ABE04348.1| Periplasmic protein TonB [Rickettsia bellii RML369-C]
gi|157802885|gb|ABV79608.1| Periplasmic protein TonB [Rickettsia bellii OSU 85-389]
Length = 323
Score = 79.2 bits (193), Expect = 6e-13, Method: Composition-based stats.
Identities = 33/256 (12%), Positives = 84/256 (32%), Gaps = 19/256 (7%)
Query: 35 RREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHAT 94
+ + D +E + K + P + + V + E +
Sbjct: 68 EAPIENEDAKKSEQTKPKEEKPKDLPKEEKAKEPETKSVEEKPKIEENKPIIEPKPEENL 127
Query: 95 ENETKRSSSSKGEQALKE---------------SALLRMPVSPYDKQKISKATNKEQDLQ 139
++ + K ++ K+ + + + K + + ++L+
Sbjct: 128 PDKKEEIKEEKPKEEEKKQVAEAKKTEEKKEEKKPVEKPKDKKKQESKTDELDSLLKNLE 187
Query: 140 GISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANW-NIPSDFKR 198
S + + + S ++++ ++ +W NIP+ +
Sbjct: 188 QSSEGDNVKSNKQKRSAKVDNKKEAKGVYTEGLPLSDSESSLIKRQIERHWNNIPAGARG 247
Query: 199 FKKLRVKMHFQLNQKGFVLGKINVDV--VGGTELVRRMLRENARKAVIKSQAFRLS-PST 255
K+++ + L++ G V + G V L ++A +AV K+ P+
Sbjct: 248 NNKVKIIISIILDKAGNVEQAKVKEKICPGIPNSVCEALADSAVRAVWKASPIENLDPAR 307
Query: 256 YKSWRNITLFFVPSKM 271
+ W+ I F PS++
Sbjct: 308 FNHWKEINFNFDPSRL 323
>gi|82523865|emb|CAI78813.1| periplasmic protein TonB [uncultured candidate division WS3
bacterium]
Length = 273
Score = 79.2 bits (193), Expect = 7e-13, Method: Composition-based stats.
Identities = 27/265 (10%), Positives = 73/265 (27%), Gaps = 15/265 (5%)
Query: 1 MRLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIY-NEDYHSSKYKKIEE 59
M++ G +S+ +HV + + SV + + +
Sbjct: 1 MKMWIG--VSLGIHVAVFGAVG-TRPTPTRNLALPANVYSVSLVSMPAPRAAPRAAAKAA 57
Query: 60 PVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMP 119
P E + + + + + + +
Sbjct: 58 PKNAPVEKPVETVRTEPPPKVETKAVDVDKEAVKPPTPEPKKKEEPKVPKTEPVDQKKPQ 117
Query: 120 VSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQD-- 177
+ +K+ + Q + + D P L + + + +
Sbjct: 118 DAVPEKKPPESEVPQAQVSGESATKDAGDSDGASEGPAAVSALGQTNTQGSVSLDAANFG 177
Query: 178 ---AIAIVRNRVIANWNIPSD-FKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRR 233
+ ++ +V +NW P + L+ +HF++ + G + G +
Sbjct: 178 FSYYLVGLQAKVASNWFPPGSIGAPGEVLKATVHFRVMEDGAITDARVESSSGVS----- 232
Query: 234 MLRENARKAVIKSQAFRLSPSTYKS 258
A +A++ S P+ ++
Sbjct: 233 YFDRCALRAIVLSSPLAPLPTEFEE 257
>gi|288957824|ref|YP_003448165.1| hypothetical protein AZL_009830 [Azospirillum sp. B510]
gi|288910132|dbj|BAI71621.1| hypothetical protein AZL_009830 [Azospirillum sp. B510]
Length = 388
Score = 78.8 bits (192), Expect = 8e-13, Method: Composition-based stats.
Identities = 33/192 (17%), Positives = 59/192 (30%), Gaps = 8/192 (4%)
Query: 88 QTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKK 147
Q K A K + +K + + + K S
Sbjct: 196 QPKEVAKAEPKKAEAPAKQPEKPSAKTDPLSDLLSNVGKIKPSDNPKADGKAQASNNSDA 255
Query: 148 SIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMH 207
+ PS A+ +R ++ NWN S K +++++H
Sbjct: 256 KPSQKTASAAPAGAAKATNGPDKPFKPSGRALDAIRGQLSKNWNFDSGRKDAASMQIEIH 315
Query: 208 FQLNQKGFVLGKINVDVVGG---TELVRRMLRENARKAVIKSQAFRLSPS-----TYKSW 259
++ + V+ + ++ R + A +AV +S L S TY+ W
Sbjct: 316 VEVGRDHSVIRAWIDEKYRSRYMSDAAFRASADAAVRAVKRSSPLDLLASEFTSQTYEDW 375
Query: 260 RNITLFFVPSKM 271
R I F P M
Sbjct: 376 RFIVFNFDPRDM 387
Score = 36.4 bits (82), Expect = 4.7, Method: Composition-based stats.
Identities = 8/66 (12%), Positives = 21/66 (31%), Gaps = 1/66 (1%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
+ L S +LHV + L+ + + ++ + + + + EP
Sbjct: 1 MRKPLIASAVLHVALVALMVLGLPPSDRK-LEIASSIPIEIVDVGEITQAARVEKGEPKP 59
Query: 63 QFKGSS 68
+
Sbjct: 60 TSNAAP 65
>gi|88812471|ref|ZP_01127720.1| TonB protein [Nitrococcus mobilis Nb-231]
gi|88790257|gb|EAR21375.1| TonB protein [Nitrococcus mobilis Nb-231]
Length = 283
Score = 78.8 bits (192), Expect = 9e-13, Method: Composition-based stats.
Identities = 39/265 (14%), Positives = 80/265 (30%), Gaps = 10/265 (3%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPV 61
RL +S+ LH+M LL L F + V+ I+ + + +
Sbjct: 13 RLPLIFLLSLALHLMVLLGLGFTWQVERTRRITPP--IEITLAQRPQESPPRDFDFLAQA 70
Query: 62 VQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVS 121
Q G + Q + A + K+ ++ ++ K + P+S
Sbjct: 71 NQNGGGRTILKTKPHERQPTSAAAHAEATPGAVKPPHKQDEQTRPVESKKPAPPKAAPLS 130
Query: 122 PYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAI 181
+++V + ++ + S + I
Sbjct: 131 KPTPHLNMAGILDTSVHVAARRELSSIVESVSAQYPSEQHIDARTHSHAAAEYMRQWIEK 190
Query: 182 VRNRVIANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENAR 240
V I N N P + + R+ + L G V + +L E A+
Sbjct: 191 VER--IGNLNYPREARERDLSGRLILEVALRPDGSVFSINVLAPSP-----FNILNEAAK 243
Query: 241 KAVIKSQAFRLSPSTYKSWRNITLF 265
+ V ++ + P T R++ +
Sbjct: 244 RIVKLAEPYAKIPKTVLQGRDLLVI 268
>gi|58581367|ref|YP_200383.1| TonB protein [Xanthomonas oryzae pv. oryzae KACC10331]
gi|84623302|ref|YP_450674.1| TonB protein [Xanthomonas oryzae pv. oryzae MAFF 311018]
gi|188577393|ref|YP_001914322.1| TonB protein [Xanthomonas oryzae pv. oryzae PXO99A]
gi|58425961|gb|AAW74998.1| TonB protein [Xanthomonas oryzae pv. oryzae KACC10331]
gi|84367242|dbj|BAE68400.1| TonB protein [Xanthomonas oryzae pv. oryzae MAFF 311018]
gi|188521845|gb|ACD59790.1| TonB protein [Xanthomonas oryzae pv. oryzae PXO99A]
Length = 291
Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 38/261 (14%), Positives = 78/261 (29%), Gaps = 17/261 (6%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP- 60
RL L IS++LH + +L + F + + + + S + + + +
Sbjct: 16 RLMMTLVISLLLHGVLILGVVFAVSEDAPLVPTLDVIFSQTSTPLTPKQADFLAQANQQG 75
Query: 61 -----VVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESAL 115
Q SQ +V + +T+ +S +GEQA+
Sbjct: 76 GGNHDTAQRPRDSQPGVVPQDRTGLAPQAQRATSVNAPAPTQTRVVTSRRGEQAVPTPQP 135
Query: 116 LRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPS 175
+ AE + ++ +S +
Sbjct: 136 NPQTDPLTPAD---AQRLQRDAEMARLAAEVHLRSEQYAKRPNRKFVSASTREYAYANYL 192
Query: 176 QDAIAIVRNRVIANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRM 234
+ + R + N N P D +R + +V ++ + + G +
Sbjct: 193 RAWVD--RAERVGNLNYPDDARRRRLGGKVVINVGVRRDG-----SVESSSVLVSSGVPL 245
Query: 235 LRENARKAVIKSQAFRLSPST 255
L + A + V +Q F P T
Sbjct: 246 LDDAALRLVQLAQPFPPLPKT 266
>gi|90417115|ref|ZP_01225043.1| biopolymer transport protein TolA [marine gamma proteobacterium
HTCC2207]
gi|90331131|gb|EAS46387.1| biopolymer transport protein TolA [marine gamma proteobacterium
HTCC2207]
Length = 254
Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 29/271 (10%), Positives = 92/271 (33%), Gaps = 33/271 (12%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
+ +S+ LH+ L +L+ + + + + + + + K
Sbjct: 10 AVLVSLALHLGLLAVLFVGWEPETTRVMIQPQYIEAKLVELAP----------------K 53
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
Q ++ + + K K++ K EQ ++ + +
Sbjct: 54 KVVQPKAKPKKPKTDSAKQKREAKKRRDKLAAQKKAKDKKREQERLKALSEKQRLEALRL 113
Query: 126 QKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNR 185
+ + ++++ + ++ + ++ E+ ++ ++ +++ R
Sbjct: 114 AEEQRLRDEQEAAREAERKRLETEFAEALAAEQAEINAQEDERVANS-----YRQLIQQR 168
Query: 186 VIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIK 245
+ NW+ P + + + +L G ++G + G T + +A K
Sbjct: 169 LSENWSRPPSARL--GMETLIRIRLVPTGRIVGVNILTSSGDT-----AFDRSVEQAAQK 221
Query: 246 SQAF----RLSPSTYK-SWRNITLFFVPSKM 271
+ F ++P ++ +R + + F P +
Sbjct: 222 VEQFIELQGMAPDLFERKFRQVDVAFSPEDL 252
>gi|157825553|ref|YP_001493273.1| periplasmic protein TonB [Rickettsia akari str. Hartford]
gi|157799511|gb|ABV74765.1| Periplasmic protein TonB [Rickettsia akari str. Hartford]
Length = 326
Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 32/248 (12%), Positives = 84/248 (33%), Gaps = 4/248 (1%)
Query: 28 QLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSD 87
Q ++ + D + + K E + E +++ +
Sbjct: 79 QRKPKEEPQDSPKAEKAKEPDAKTIEEKPKIEEKKPIEEPKHEEAKEALLEKKDEVKEEK 138
Query: 88 QTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKK 147
+ + K+ + E+ + + K + + ++L+ S +
Sbjct: 139 PKEEEKKQTYEKKKTEEHKEEVVVNKLEETAKEVKKKEPKTDELDSLLKNLEQSSEGDNV 198
Query: 148 SIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANW-NIPSDFKRFKKLRVKM 206
+ + S+ ++++ ++ +W N+P+ + K++V +
Sbjct: 199 KSNKHKRSKKADNAKEAKGVDTDGLPLSESETSLIKRQIERHWSNVPAGVRGNNKVKVII 258
Query: 207 HFQLNQKGFVLGKINVDVVGGT--ELVRRMLRENARKAVIKSQAFRLS-PSTYKSWRNIT 263
L++ G V + + V L +NA +AV ++ P+ + W+ I
Sbjct: 259 SITLDKAGNVEHAKVKEKICPNITASVCEALADNAIRAVWQASPIENLDPARFNHWKEIN 318
Query: 264 LFFVPSKM 271
+ F PSK+
Sbjct: 319 VSFDPSKL 326
>gi|163745824|ref|ZP_02153183.1| tonB domain protein, putative [Oceanibulbus indolifex HEL-45]
gi|161380569|gb|EDQ04979.1| tonB domain protein, putative [Oceanibulbus indolifex HEL-45]
Length = 395
Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 39/250 (15%), Positives = 75/250 (30%), Gaps = 10/250 (4%)
Query: 26 NVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRF 85
P+ + + + + D + E QE + S E
Sbjct: 145 PRVAPEPVEQPDP---EVRPDLDEQPAVEPDAEAEAEAVVEEPQEARTPEDSTTEIVTEA 201
Query: 86 SDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAE 145
A + + + E + P + K + + +
Sbjct: 202 DKAPAASARPPGRRPTPPPPAPVEVAEKPVETPKPEPKPEAKPEPKPEPKPEPTPVEEPA 261
Query: 146 KKSIDTVVVRPDKKELLSK---VEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKL 202
S + E+L + + S +R V A WNI + +
Sbjct: 262 TSSSTEDAIADALSEVLGQPEATAPTPSGPPLSSGERESLRVAVSACWNIGALSTEAART 321
Query: 203 RVKMHFQLNQKGFVLGKIN--VDVVGGTELVRRMLRENARKAVIKS--QAFRLSPSTYKS 258
V + Q+N G + + GG++ R E A++AVI+ ++L Y
Sbjct: 322 TVVVGMQMNTDGTPVASSIRLLSSSGGSDTAARQAYEAAKRAVIRCGSSGYKLPQEKYSQ 381
Query: 259 WRNITLFFVP 268
W++I + F P
Sbjct: 382 WQDIEMTFDP 391
Score = 46.0 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 17/152 (11%), Positives = 39/152 (25%), Gaps = 2/152 (1%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
+ G IS H+ + L F EM V I +Y + +
Sbjct: 1 MHTGHYISGAGHLGLIAWLLFGSIFTSEP--EPVEMTEVSVISAAEYDALVAAQQPPSSS 58
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
V + + + + + + + ET L+ ++ +P
Sbjct: 59 TEVAQPAPPEVSEETPEVTAEPDTQIEQPEPVQTETPPEDLPPEVTELELPPQTQVDDTP 118
Query: 123 YDKQKISKATNKEQDLQGISFAEKKSIDTVVV 154
+ + T +++
Sbjct: 119 PEMNEPVGDTAVLVPEIAPESRPREAPRVAPE 150
>gi|238651139|ref|YP_002916614.1| tonB/tolA protein [Rickettsia peacockii str. Rustic]
gi|238625237|gb|ACR47943.1| tonB/tolA protein [Rickettsia peacockii str. Rustic]
Length = 323
Score = 78.0 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 32/249 (12%), Positives = 76/249 (30%), Gaps = 6/249 (2%)
Query: 27 VQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFS 86
+ P + LS + E + K + + K +
Sbjct: 77 SEQSKPKEEPQDLSKEEKAKEPEAKTMEAK--PKIEEKKPIEEPKSEEAKEALPEKKEEV 134
Query: 87 DQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEK 146
+ K E + E+ + + + K + + + L+ S +
Sbjct: 135 KEEKPKEEEKKQAEEKKKPEEKKEETKPAEKPKDVKKKEPKTDELDSLLKHLEQSSEGDN 194
Query: 147 KSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANW-NIPSDFKRFKKLRVK 205
+ + S ++++ ++ +W N+P+ + K++V
Sbjct: 195 VKSNKHQRSKKADNAQEAKGVYTDGLPLSDSETSLIKRQIERHWSNVPAGVRGNNKVKVI 254
Query: 206 MHFQLNQKGFVLGKINVDVVGGTELV--RRMLRENARKAVIKSQAFRLS-PSTYKSWRNI 262
+ L++ G V + L +NA +AV ++ + + W+ I
Sbjct: 255 ISITLDKAGNVEQAKVNKKICPNIPASVCEALADNAIRAVWQASPIENLDSARFNHWKEI 314
Query: 263 TLFFVPSKM 271
F PSK+
Sbjct: 315 NFSFDPSKL 323
>gi|116748200|ref|YP_844887.1| TonB family protein [Syntrophobacter fumaroxidans MPOB]
gi|116697264|gb|ABK16452.1| TonB family protein [Syntrophobacter fumaroxidans MPOB]
Length = 317
Score = 78.0 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 44/305 (14%), Positives = 79/305 (25%), Gaps = 46/305 (15%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKK------IEE 59
G+ S+++H+ ++L + + +V+ + +D + KK E
Sbjct: 19 GVGGSILVHIGVIVLA-VAVSWHIPKKGVAPAFTTVNLVSMQDVAGAAPKKGLQTKGAEG 77
Query: 60 PVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQAL--------- 110
P Q V R D K E + S
Sbjct: 78 PRTQEAAKPVPTAKPGPMVPIRRLRMEDPVKKTEPEIKKIESRDIPKVAETAPASMSVEK 137
Query: 111 -----------------------KESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKK 147
+E + + S N Q +
Sbjct: 138 SLEKLIPKPKAPAKPAQAAQASSQEPSAAPQEQRQARVKPSSTQENPAQGNPRGAVDGHA 197
Query: 148 SIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMH 207
E K + V+N + + W+I K +L ++
Sbjct: 198 GGTADTTARGNPEASGKADGGRVASALLALYANQVKNAINSQWSILDSLK-STRLEARLL 256
Query: 208 FQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPSTYKSWR-NITLFF 266
+++ G VL G + E +AV K+ P TY S R + F
Sbjct: 257 IAVSRDGRVLDLQVEKPSGNG-----LFDEACVRAVRKAAPLPPIPETYTSPRIEFVINF 311
Query: 267 VPSKM 271
P +
Sbjct: 312 RPEGL 316
>gi|217977105|ref|YP_002361252.1| TolA protein [Methylocella silvestris BL2]
gi|217502481|gb|ACK49890.1| TolA protein [Methylocella silvestris BL2]
Length = 394
Score = 78.0 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 29/232 (12%), Positives = 65/232 (28%), Gaps = 5/232 (2%)
Query: 43 NIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSS 102
+ + K EP + + + D + K
Sbjct: 164 VAPDAEEPKPVAKPKPEPKKVAEAKPEPKKIIAEPKPRPVDPPKKPEPKFKPDELAKLLE 223
Query: 103 SSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELL 162
K + +E+ + + L ++K+ ++
Sbjct: 224 EQKPKDKPQETPAKPKSGEESAEPTPKFDLSAISRLLNKDAPQQKAATGRELQQVASLGS 283
Query: 163 SKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINV 222
+ I++++ WN +K ++H Q Q G ++G +
Sbjct: 284 PTASAAKMSPTLWAQLDGILQDQYRHCWNFV-GLAGQQKYVPQIHVQYAQDGGLVGTPEL 342
Query: 223 DVVGGTELVRRMLRENARKAVIKSQAFRLSPST---YKSWRNITLFFVPSKM 271
+ + R L ++A +AV + R+ Y W+ + F P M
Sbjct: 343 -LNPPADPNLRSLADSALRAVRRCNPLRIPAQYQPFYDQWKGRIVRFDPEDM 393
Score = 44.9 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 23/177 (12%), Positives = 46/177 (25%), Gaps = 3/177 (1%)
Query: 1 MRLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP 60
+R G A+S H + L L F+F +E + V+ + + ++ +
Sbjct: 3 LRDHPGAALSGGGHALLLAALVFSF-AHSSKFDDAQETIPVEMLTDSQFNQIMKGEKTAK 61
Query: 61 VVQFKGSSQENLVR--DFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRM 118
+ + + L + D T + E + R
Sbjct: 62 LSEKPQQKAQKLAEITEAKPVLTRDPAKTDVPTPPPRAQPVDDPGRSDEAKAAPTPPERP 121
Query: 119 PVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPS 175
V P Q + + + A K + E+ P
Sbjct: 122 VVEPAKAQPEPQKAEPAKTEPAKAEAAKPEPAKQTAATPPDAVAPDAEEPKPVAKPK 178
>gi|157828299|ref|YP_001494541.1| periplasmic protein TonB [Rickettsia rickettsii str. 'Sheila
Smith']
gi|165933003|ref|YP_001649792.1| TolA [Rickettsia rickettsii str. Iowa]
gi|13235466|emb|CAC33701.1| hypothetical protein [Rickettsia rickettsii]
gi|157800780|gb|ABV76033.1| Periplasmic protein TonB [Rickettsia rickettsii str. 'Sheila
Smith']
gi|165908090|gb|ABY72386.1| TolA [Rickettsia rickettsii str. Iowa]
Length = 323
Score = 77.6 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 33/249 (13%), Positives = 78/249 (31%), Gaps = 6/249 (2%)
Query: 27 VQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFS 86
+ P + LS + E + K + + K + +
Sbjct: 77 SEQSKPKEEPQDLSKEEKAKEPEAKTMEAK--PKIEEKKPIEEPKSEKAKEALPEKKEEV 134
Query: 87 DQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEK 146
+ A E + E+ + + K K + + ++L+ S +
Sbjct: 135 KEETPKAEEKKQAEEKKKPEEKKEETKPAEKPKDVKKKKPKTDELDSLLKNLEQSSEGDN 194
Query: 147 KSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANW-NIPSDFKRFKKLRVK 205
+ + S ++++ ++ +W N+P+ + K++V
Sbjct: 195 VKSNKHQRSKKADNAQEAKGVYTDGLPLSDSDTSLIKRQIERHWSNVPAGVRGNNKVKVI 254
Query: 206 MHFQLNQKGFVLGKINVDVVGGTELV--RRMLRENARKAVIKSQAFRLS-PSTYKSWRNI 262
+ L++ G V + L +NA +AV ++ + + W+ I
Sbjct: 255 ISITLDKAGNVEQAKVNKKICPNIPASVCEALADNAIRAVWQASPIENLDSARFNHWKEI 314
Query: 263 TLFFVPSKM 271
F PSK+
Sbjct: 315 NFSFDPSKL 323
>gi|149202851|ref|ZP_01879822.1| tonB domain protein, putative [Roseovarius sp. TM1035]
gi|149143397|gb|EDM31433.1| tonB domain protein, putative [Roseovarius sp. TM1035]
Length = 379
Score = 77.6 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 35/258 (13%), Positives = 72/258 (27%), Gaps = 12/258 (4%)
Query: 26 NVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQE--NGD 83
V ++ + + + + + E + + +E
Sbjct: 119 PVLETPQEDVAVVVPQVSPRPKPRPAPRVAPEAVAPPEPDVRIDEVAQSEVAPEEGAEVP 178
Query: 84 RFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISF 143
+ + + + + + A S+L P + T E +
Sbjct: 179 QEPAEATAQEEAATEIVTEAEESKDAAPTSSLRPKPRPARPVAQAEAPTPTETPAPATTE 238
Query: 144 AEKKSIDTVVVRPDKKELL------SKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFK 197
+ + L + + + + +R V WN+ S
Sbjct: 239 TPRPAAPATDQSAVNDALAAALGTGQQTDTAPSGPPLTSGEKDALRVAVQQCWNVGSLST 298
Query: 198 RFKKLRVKMHFQLNQKGFVL--GKINVDVVGGTELVRRMLRENARKAVIKS--QAFRLSP 253
V + ++ + G GG + R E AR+A+I+ F L P
Sbjct: 299 EALGTTVVVSVRMGEDGRPDNGSIRMDSFSGGGDAAARQAFEAARRAIIRCGANGFNLPP 358
Query: 254 STYKSWRNITLFFVPSKM 271
Y WR+I + F P M
Sbjct: 359 EKYDQWRDIEMTFNPESM 376
Score = 43.0 bits (99), Expect = 0.040, Method: Composition-based stats.
Identities = 21/179 (11%), Positives = 46/179 (25%), Gaps = 4/179 (2%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
+ G IS H+ + + P E++ I +E++ + ++ V
Sbjct: 1 MNTGQIISGAGHLALIGWALLGGVFRSDPP--PFEVVEATTISSEEFAALLARQSAPEAV 58
Query: 63 QFKGSSQENLVRDFSVQ--ENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPV 120
+ + D + D + T A E + E A +
Sbjct: 59 ANVDTPEPPAPGDSAPPLASIPDTPPESTPPPAQETAPPDPAPDVSEITPPAPAEVTDTA 118
Query: 121 SPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAI 179
+ + A Q + V P + ++ S +
Sbjct: 119 PVLETPQEDVAVVVPQVSPRPKPRPAPRVAPEAVAPPEPDVRIDEVAQSEVAPEEGAEV 177
>gi|145219970|ref|YP_001130679.1| TonB-like protein [Prosthecochloris vibrioformis DSM 265]
gi|145206134|gb|ABP37177.1| Cell division and transport-associated protein TolA [Chlorobium
phaeovibrioides DSM 265]
Length = 278
Score = 77.6 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 39/265 (14%), Positives = 72/265 (27%), Gaps = 10/265 (3%)
Query: 7 LAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKG 66
LA++ +HV +L V + ++SV + +K + V
Sbjct: 18 LAVAAGIHV-VVLFGLVGLQSLNRVQSFKPRVVSVSLLSL-PGTGGSSEKAGKKVPAAAK 75
Query: 67 SSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQ 126
+ + T E + A + +Q
Sbjct: 76 PAPRKPAAKKVPEPAPVPVPKPTAAKKVPVEPVSKPKPVKPKKEDALASALDRLKKGVEQ 135
Query: 127 KISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRV 186
K S + + + + +K S + A V +
Sbjct: 136 KKSPSADDNLKSALSRLKAGAATSASGTGGEAAGSGTKGAGSGTG-GLADPYKAAVAGII 194
Query: 187 IANWNIPSDF-KRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIK 245
NW + + V + ++ G + I D +E L + +KA+ K
Sbjct: 195 QENWEFSGSLLRNTSGMEVYVRIRVQANGTIAQ-IVFDQRSPSE----YLNNSVKKALEK 249
Query: 246 SQAFRLSPSTYKSWRN-ITLFFVPS 269
S P Y S + I F PS
Sbjct: 250 SSPLPQFPPEYGSPQEWIGFVFTPS 274
>gi|114771187|ref|ZP_01448607.1| Possible TolA protein [alpha proteobacterium HTCC2255]
gi|114548112|gb|EAU50999.1| Possible TolA protein [alpha proteobacterium HTCC2255]
Length = 375
Score = 77.6 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 28/222 (12%), Positives = 75/222 (33%), Gaps = 4/222 (1%)
Query: 51 SSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQAL 110
S++ + + + +S E + + + + +T + K +
Sbjct: 155 SNEAPEEPADIGALEDTSFEKVNGADEEKLEIELNENTPAEESTTQIVTEAEEQKSDLVP 214
Query: 111 KESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSR 170
++ + K K + + + + + ++++ +K+ +
Sbjct: 215 SRTSKPKSRPKNLKTTKEIAIKPKLKPKEVVEAEKDTTAESILESLKEKKEPEPFLNLTP 274
Query: 171 KRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTEL 230
+ S + I++N++ WN + + + + + G ++
Sbjct: 275 AQKESV--VNIIKNKMRLCWNPSVGVENGLTNVMILGLKFDIDGKLVESPVNLTPNSGVG 332
Query: 231 VRRMLRENARKAVIKSQAFR-LSPSTYKSWRNITLFFVPSKM 271
+ E AR+AVI+ + L P Y W+ + L F P M
Sbjct: 333 SLQAF-EAARRAVIRCSPYNELDPEIYDGWKELNLKFNPKNM 373
>gi|239995974|ref|ZP_04716498.1| TolA-like protein [Alteromonas macleodii ATCC 27126]
Length = 297
Score = 77.2 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 38/261 (14%), Positives = 94/261 (36%), Gaps = 14/261 (5%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
GL S+ LH+ LL + + S V D + +K E+ + +
Sbjct: 45 GLYKSIGLHLFIAALLLISVSFSPDPLPSMPSNAPVIEATFIDAQAIADQKREQAQAEAQ 104
Query: 66 GSSQENLV--RDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPY 123
++E + + E R K + E + + + + + + +A
Sbjct: 105 ARAEEQERQRKAEAAAEKKRRQQLAAKRAKEKREAEAAEAKRQKDLERLAAQKEQERKER 164
Query: 124 DKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVR 183
+ + ++A K+++ + E+ + + K++ + + + + A+++
Sbjct: 165 EAKAKAEAERKKKEAAERAEMERIMQEQLA----KEQAAQQERRRKQVLTEVERYTALIQ 220
Query: 184 NRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAV 243
+ N ++ +++ +L GFV + GG + + R R+A
Sbjct: 221 QTIKRN---LYSDDSYQGKTCRLNIRLATTGFVTSIRVL---GGNDALCRAAESAVRRAE 274
Query: 244 IKSQAFRLSPSTYKSWRNITL 264
+P Y+ ++ITL
Sbjct: 275 KL--PVSDAPDVYEQLKDITL 293
>gi|85374729|ref|YP_458791.1| TonB protein [Erythrobacter litoralis HTCC2594]
gi|84787812|gb|ABC63994.1| TonB protein [Erythrobacter litoralis HTCC2594]
Length = 279
Score = 77.2 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 36/245 (14%), Positives = 72/245 (29%), Gaps = 6/245 (2%)
Query: 28 QLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSD 87
Q + V +E+ + P + + + + +
Sbjct: 31 QPSTRELVEQPERVTVNLSEEVGLTAEAPDPVPESRAAIAPILDTLPTPPLPVPVPMPIP 90
Query: 88 QTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKK 147
Q + T R + + P P ++ + Q +
Sbjct: 91 QPRPEPTTRPEPRPEPITRPEPRPTARATSAPRQPTPRRTQAPRPQPTQSSAPPRGSRLG 150
Query: 148 SIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMH 207
++V S + + + +W PS +++ +
Sbjct: 151 DDFLSGQGSSTTTQETRVPASQIGASARASLVQAIAREIKPHWQPPSG-PEVEEIVTVLR 209
Query: 208 FQLNQKGFVLGKINVDVVGGTELVRRMLREN----ARKAVIKSQAFRLSPSTYKSWRNIT 263
F LN+ G + G+ +V G + R E A +AV ++ F L P Y +WRNI+
Sbjct: 210 FSLNEDGSLAGRPSVVRQTGVNEINRAQAERHGELAIRAVQRAAPFDLPPEYYNAWRNIS 269
Query: 264 -LFFV 267
F
Sbjct: 270 AFSFD 274
>gi|294085865|ref|YP_003552625.1| protein TonB [Candidatus Puniceispirillum marinum IMCC1322]
gi|292665440|gb|ADE40541.1| Periplasmic protein TonB, links inner and outer membranes
[Candidatus Puniceispirillum marinum IMCC1322]
Length = 331
Score = 77.2 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 29/327 (8%), Positives = 80/327 (24%), Gaps = 59/327 (18%)
Query: 4 ENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQ 63
+ IS+ LH+ +L + +++++ + + E +
Sbjct: 3 SRPVIISVTLHIAIAVLFAVGLPSIKRKLPEEQPIIAMEIVQTVPISNLTEGAQESTAKK 62
Query: 64 FKG--------------------------SSQENLVRDFSVQENGDRFSDQTKTHATENE 97
+ + V + + +
Sbjct: 63 AQEPAKRKNTPPPPPPKAAPKSKPVKPVAKVKPKSVPTPKAPDKTAEIIPDKAKPKPKVK 122
Query: 98 TKRSSSSKGEQALKESALLRMPVSPYDKQKISKATN------------------------ 133
K + + +P K
Sbjct: 123 PKPAPVKTPTPPQTKPKRTEAAAAPTKLPKAPPRRENKMAKASKQKKKQAQALTGVMQNL 182
Query: 134 -KEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRI-------PSQDAIAIVRNR 185
K + + + ++++ + + L+ ++ K ++R
Sbjct: 183 AKAKQVNEEAEKKRRAQERKKAAEKVNKTLTATTGNALKAPKAPVIAPMGASDFDLLRAH 242
Query: 186 VIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGT-ELVRRMLRENARKAVI 244
+ W++P L V + ++ G VL + + + A++A +
Sbjct: 243 LSKCWDLPVGSAGADTLIVDIIVTSDRDGTVLSAEIKNKTRYKIDRAFKAAAAEAQRATL 302
Query: 245 KSQAFRLSPSTYKSWRNITLFFVPSKM 271
+ L P Y W++ F P +
Sbjct: 303 ECSPLPLPPEKYDQWKSFVFAFDPRSL 329
>gi|254787336|ref|YP_003074765.1| protein TolA [Teredinibacter turnerae T7901]
gi|237685700|gb|ACR12964.1| protein TolA [Teredinibacter turnerae T7901]
Length = 250
Score = 77.2 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 32/270 (11%), Positives = 87/270 (32%), Gaps = 36/270 (13%)
Query: 7 LAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKG 66
+A+S+ILH + + +L+ NF K + ++ K
Sbjct: 10 IAVSVILHGLVVAVLFVNFGS----------------------TPPPRKVVAPQYIEAKL 47
Query: 67 SSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQ 126
E + S + + A E + + + + + + + ++
Sbjct: 48 VELEKKAKPASAPKKPKVVDLTAQRKAQEIQKRAAEKQRQLKIQADKEAEAKRRAEKKQR 107
Query: 127 KISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRV 186
+ + Q + + +++ + K+E + + +Q +++ R+
Sbjct: 108 EKEEREKLAQQQREMEQQKRERMQQEFAEALKEE--QGLLAADESATVAQSYADVIQRRI 165
Query: 187 IANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKS 246
W+ P + +R ++ + G ++ G + +A AV K
Sbjct: 166 EQQWSRPPSAR--NGMRCELTIDMVPNGRIIDVNLKKSSGNS-----AFDRSAIAAVKKV 218
Query: 247 QAFR----LSPSTYKS-WRNITLFFVPSKM 271
+ + ++ +R +L F P +
Sbjct: 219 EVIPEVKDIPIDVFERHFRKFSLAFQPEDL 248
>gi|254441840|ref|ZP_05055333.1| hypothetical protein OA307_1255 [Octadecabacter antarcticus 307]
gi|198251918|gb|EDY76233.1| hypothetical protein OA307_1255 [Octadecabacter antarcticus 307]
Length = 373
Score = 77.2 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 28/229 (12%), Positives = 59/229 (25%), Gaps = 5/229 (2%)
Query: 48 DYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGE 107
+ + + + + + + + T + E
Sbjct: 142 PRAAPRVAPEIVAPPEPDATVAPEVAQAATEEVEAPVEETVEPAAETTAPEAAADQIVTE 201
Query: 108 QALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEK 167
A Q+ + + + V S
Sbjct: 202 AEEPSFAPEISSRPQTRPQRAAVGVVETPTEDAVDPVVAALAAAGAVETPTSTPTSTPNP 261
Query: 168 SSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGF-VLGKINVDV-V 225
S+ + ++ WN + + + M F + G V G I +D
Sbjct: 262 GLSGGQLSEGDKSGFLRQIGNCWNTGTLSTGAQNTIIDMVFDMTPDGRPVSGSIRLDGFS 321
Query: 226 GGTELVRRMLRENARKAVIKSQ---AFRLSPSTYKSWRNITLFFVPSKM 271
GGT + AR+A+++ + L Y W+ + L P+ M
Sbjct: 322 GGTATDADAAFQAARRALLRCSGDTGYDLPRDQYAQWQRVILTVDPTAM 370
Score = 49.1 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 16/181 (8%), Positives = 38/181 (20%), Gaps = 4/181 (2%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSV----DNIYNEDYHSSKYKKIE 58
+ G +S H ++ L + + P +SV + E
Sbjct: 1 MSIGTTLSGTGHAALVVWLVVGWGMSSDRPPFEVMEVSVMSGAEFAALTQGVQPDLPASE 60
Query: 59 EPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRM 118
++ + V A E + + E + + A
Sbjct: 61 PAAIEQPVVDETPPVPLVETPPEVAEVPTPVALPAAETPPEAPDLTVPETVVTDVAPDIP 120
Query: 119 PVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDA 178
+ S + PD + ++ + +
Sbjct: 121 DMPQITTPAPSAELGTSLRPVPRAAPRVAPEIVAPPEPDATVAPEVAQAATEEVEAPVEE 180
Query: 179 I 179
Sbjct: 181 T 181
>gi|229586573|ref|YP_002845074.1| Periplasmic protein TonB, links inner and outer membranes
[Rickettsia africae ESF-5]
gi|228021623|gb|ACP53331.1| Periplasmic protein TonB, links inner and outer membranes
[Rickettsia africae ESF-5]
Length = 323
Score = 77.2 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 27/229 (11%), Positives = 71/229 (31%), Gaps = 4/229 (1%)
Query: 47 EDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKG 106
+K + + + + K + + K E +
Sbjct: 95 TKEPEAKTMEAKPKIEEKKPIEEPKSEEAKEALPEKKEEVKEEKPKEEEKKQAEEKKKPE 154
Query: 107 EQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVE 166
E+ + + + K + + + L+ S + +
Sbjct: 155 EKKEETKPAEKPKDVKKKEPKTDELDSLLKHLEQSSEGDNVKSNKHQRSKKADNAQEAKG 214
Query: 167 KSSRKRIPSQDAIAIVRNRVIANW-NIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVV 225
+ S ++++ ++ +W N+P+ + K++V + L++ G V +
Sbjct: 215 VYTDGLPLSDSETSLIKRQIERHWSNVPAGVRGNNKVKVIISITLDKAGNVEQAKVNKKI 274
Query: 226 GGTELV--RRMLRENARKAVIKSQAFRLS-PSTYKSWRNITLFFVPSKM 271
L +NA +AV ++ + + W+ + F PSK+
Sbjct: 275 CPNIPASVCEALADNAIRAVWQASPIENLDSARFNHWKEMNFSFDPSKL 323
>gi|296386905|ref|ZP_06876404.1| putative tonB domain protein [Pseudomonas aeruginosa PAb1]
gi|313111972|ref|ZP_07797760.1| putative tonB domain-containing protein [Pseudomonas aeruginosa
39016]
gi|310884262|gb|EFQ42856.1| putative tonB domain-containing protein [Pseudomonas aeruginosa
39016]
Length = 297
Score = 76.9 bits (187), Expect = 3e-12, Method: Composition-based stats.
Identities = 29/257 (11%), Positives = 82/257 (31%), Gaps = 18/257 (7%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPV 61
RL L I+ ILHV F+L + F+ P + L + + + + +
Sbjct: 20 RLGFTLFIAAILHVAFILGVGFSMPA----PSQISKTLEITLATFKSDKAPEKADYLAQM 75
Query: 62 VQFKGSSQENLVRDFSVQENG------DRFSDQTKTHATENETKRSSSSKGEQALKESAL 115
Q + E+ + + + + +E ++ + ++ A
Sbjct: 76 NQQGSGTLEHKAAPKTTEVAPFQDNQVKKVAPPATPKQARSEEAPKAAVTTTRQRQQKAP 135
Query: 116 LRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPS 175
+ ++ L + + + K+ + ++ +S R
Sbjct: 136 SKTQAQKAEQVAKPAPHFDSTQLSAEIASLEADLAKEQQAYAKRPRIHRLSAASTMRDKG 195
Query: 176 QDAIAIVRNRVIANWNIPSDFKRFKK---LRVKMHFQLNQKGFVLGKINVDVVGGTELVR 232
R ++ N+ + ++ +++ +N+ G + ++ G
Sbjct: 196 AWYKEDWRKKIERIGNLNYPDEARRQKLYGSLRLLVSINRDGTIYEVQVLESSGE----- 250
Query: 233 RMLRENARKAVIKSQAF 249
+L + A++ V + +
Sbjct: 251 PILDQAAQRIVRLAAPY 267
>gi|254486688|ref|ZP_05099893.1| conserved hypothetical protein [Roseobacter sp. GAI101]
gi|214043557|gb|EEB84195.1| conserved hypothetical protein [Roseobacter sp. GAI101]
Length = 323
Score = 76.9 bits (187), Expect = 3e-12, Method: Composition-based stats.
Identities = 30/162 (18%), Positives = 53/162 (32%), Gaps = 4/162 (2%)
Query: 114 ALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRI 173
P + K L + + V D + +
Sbjct: 159 DREASSSEPIQSAETPKPKPISPGLSEPAKGRNLETNGVPDELDHRLAAPTAPYLPSEAS 218
Query: 174 PSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGF-VLGKINVDVV-GGTELV 231
S + V A WN+ S + V + + G + G I + GG+E
Sbjct: 219 LSPEEKQAFLLAVSACWNVGSLSSEALRTTVTVEMAMKPDGTPIAGSIQLASSFGGSEAA 278
Query: 232 RRMLRENARKAVIKSQA--FRLSPSTYKSWRNITLFFVPSKM 271
E AR+++I+ A F+L + +W+ +TL F +M
Sbjct: 279 VTQAFEAARRSIIRCGARGFQLPAEKFDAWKEMTLMFNAERM 320
>gi|288939958|ref|YP_003442198.1| TonB family protein [Allochromatium vinosum DSM 180]
gi|288895330|gb|ADC61166.1| TonB family protein [Allochromatium vinosum DSM 180]
Length = 336
Score = 76.9 bits (187), Expect = 3e-12, Method: Composition-based stats.
Identities = 41/287 (14%), Positives = 74/287 (25%), Gaps = 42/287 (14%)
Query: 5 NGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNI-------------------- 44
LA + LH++ +L + F + P S E++ + +I
Sbjct: 29 AALAGAGWLHLLLILAVSFVWPEPGPPPESAMEVVLLKDIGAGVPNRASEAALAQRDQVG 88
Query: 45 -------------YNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKT 91
+ S + E P + S D
Sbjct: 89 QAPLGDAAIPTFGEAPEASSDTRAQTEAPAGDADLRTVTPEPATASTPTEVPPHDDPLAR 148
Query: 92 HATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDT 151
R + A + A R V P ++ + QG+ A S T
Sbjct: 149 PDAMTLPLREPPTAPILATEAEAPPRPEVDPLTPRQTVVDAAQILASQGLEVARLTSSQT 208
Query: 152 VVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKK---LRVKMHF 208
K K +S + +A +V N+ + + +H
Sbjct: 209 ASAAGGSKRARRKSISASTREFRYASYLAAWAQKVERIGNLNYPQAARDQRLYGSLILHV 268
Query: 209 QLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAF-RLSPS 254
+ G + V G +L + A + V + F P
Sbjct: 269 AVRADGSLENIRVVRSSG-----FDLLDQAAIRIVELAAPFSPFPPD 310
>gi|107099392|ref|ZP_01363310.1| hypothetical protein PaerPA_01000404 [Pseudomonas aeruginosa PACS2]
Length = 297
Score = 76.9 bits (187), Expect = 3e-12, Method: Composition-based stats.
Identities = 28/257 (10%), Positives = 81/257 (31%), Gaps = 18/257 (7%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPV 61
RL L I+ ILHV +L + F+ P + L + + + + +
Sbjct: 20 RLGFTLFIAAILHVALILGVGFSMPA----PSQISKTLEITLATFKSDKAPEKADYLAQM 75
Query: 62 VQFKGSSQENLVRDFSVQENG------DRFSDQTKTHATENETKRSSSSKGEQALKESAL 115
Q + E+ + + + + +E ++ + ++ A
Sbjct: 76 NQQGSGTLEHKAAPKTTEVAPFQDNQVKKVAPPATPKQARSEEAPKAAVTTTRQRQQKAP 135
Query: 116 LRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPS 175
+ ++ L + + + K+ + ++ +S R
Sbjct: 136 SKTQAQKAEQVAKPAPHFDSTQLSAEIASLEADLAKEQQAYAKRPRIHRLSAASTMRDKG 195
Query: 176 QDAIAIVRNRVIANWNIPSDFKRFKK---LRVKMHFQLNQKGFVLGKINVDVVGGTELVR 232
R ++ N+ + ++ +++ +N+ G + ++ G
Sbjct: 196 AWYKEDWRKKIERIGNLNYPDEARRQKLYGSLRLLVSINRDGTIYEVQVLESSGE----- 250
Query: 233 RMLRENARKAVIKSQAF 249
+L + A++ V + +
Sbjct: 251 PILDQAAQRIVRLAAPY 267
>gi|153874182|ref|ZP_02002497.1| tonB domain protein [Beggiatoa sp. PS]
gi|152069355|gb|EDN67504.1| tonB domain protein [Beggiatoa sp. PS]
Length = 306
Score = 76.9 bits (187), Expect = 3e-12, Method: Composition-based stats.
Identities = 29/277 (10%), Positives = 67/277 (24%), Gaps = 32/277 (11%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPV 61
R L +S +LH + + + F + S E++ + K
Sbjct: 12 RFAVALFLSAVLHFVIIYGMGFVMPKPGKILNSTMEII---LVQKSTKEIPKKADYLAQA 68
Query: 62 VQFKGSSQENLVRDFSVQENGDRFS------DQTKTHATENETKRSSSSKGEQALKESAL 115
G E R + +
Sbjct: 69 THEGGGDAEPKTRPSTPTLAPFPEQTAELVFTPPPPQTAAASLDEPQTEILTTVKSTQHQ 128
Query: 116 LRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKS------- 168
+ + + N Q++ + + ++ + +++ S
Sbjct: 129 IEQQTEITPPDEPGEYGNASQNVIFDEYVSENTLFINTSAAKLASIQAELADSFNSYAKR 188
Query: 169 --------SRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKK---LRVKMHFQLNQKGFVL 217
S K + + R ++ N + ++ + + LN G +
Sbjct: 189 LRHKYISASTKEFKYANYMEAWRRKIEEIGNTNYPNQARRRKLSGSLILDVALNPNGTIR 248
Query: 218 GKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPS 254
+ R+L E A + V + F P
Sbjct: 249 QVEIKESSK-----YRILDEAALRIVRLAAPFDPFPE 280
>gi|192360689|ref|YP_001980606.1| TonB family C-terminal domain-containing protein [Cellvibrio
japonicus Ueda107]
gi|190686854|gb|ACE84532.1| TonB family C-terminal domain protein [Cellvibrio japonicus
Ueda107]
Length = 299
Score = 76.5 bits (186), Expect = 3e-12, Method: Composition-based stats.
Identities = 27/262 (10%), Positives = 81/262 (30%), Gaps = 19/262 (7%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP- 60
RL L +++++H + LL + F + + + + +
Sbjct: 15 RLSFTLFMALVIHGLILLGIDFKLPEHSNH----SQTIEITLATHNALRAPDDADFLAQH 70
Query: 61 ------VVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESA 114
+ +F+ + D + A + + + Q+ ++
Sbjct: 71 NQEASGTIDEAKQLTTVKQAEFADTQVRDVNPIPQQQAAAIQQRDQQLVTTRGQSQFQAQ 130
Query: 115 LLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIP 174
+ P ++++I + + + + +D ++ + + S K
Sbjct: 131 IKPYPDEQEEREQIDGLVENQPMISAEIASLQAKLDQQRQEYARRPRIRTLTSVSTKASF 190
Query: 175 SQDAIAIVRNRVIANWNIPSDFKRFKK---LRVKMHFQLNQKGFVLGKINVDVVGGTELV 231
+ R+ + ++ ++++ +N G + + G
Sbjct: 191 DAKYLHDWSTRIEQVGTRHYPGEALRRHITGQLRLSVVINPDGSIYEVNILQSSG----- 245
Query: 232 RRMLRENARKAVIKSQAFRLSP 253
+R+L + AR+ V + F P
Sbjct: 246 QRLLDDAARQIVRLASPFAAFP 267
>gi|95929960|ref|ZP_01312700.1| TonB-like [Desulfuromonas acetoxidans DSM 684]
gi|95133929|gb|EAT15588.1| TonB-like [Desulfuromonas acetoxidans DSM 684]
Length = 283
Score = 76.5 bits (186), Expect = 3e-12, Method: Composition-based stats.
Identities = 32/274 (11%), Positives = 84/274 (30%), Gaps = 17/274 (6%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
+ L +S ILHV+ L+ + P ++ + VD + N+ + + + P
Sbjct: 19 IGRMLVLSFILHVLLFALMGGYLVPRFEKP--QKPVYYVDLL-NKPVAKPRAGRPDAPAK 75
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
+ ++ +++ E ++ ++ +P
Sbjct: 76 KKAPKKKKPVIKKAPAVTKPPVKKKPVTVKKAPAEVVKTQPKATQKTPVVKQPADVPTKT 135
Query: 123 YDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAI- 181
+K + + + L+ + + ++ + D + +
Sbjct: 136 VEKNYQEETLDAIERLKRKQRINALKQELNALATRDIPTTDTIDAPVGEVGGQGDEVGVG 195
Query: 182 ----VRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRE 237
++ + W + + L+ KM Q N G + + G +
Sbjct: 196 FDSWIKEYLSQAWAL-PRHYWERGLKAKMVLQFNTSGRLAHYEMLSPSGDS-----FFDA 249
Query: 238 NARKAVIKSQAFRLSPSTYKSWRNITLFFVPSKM 271
+ ++AV + PS + + F P +M
Sbjct: 250 SVKRAVQQ---LTQLPSKPARPLELIVTFDPKEM 280
>gi|51246263|ref|YP_066147.1| hypothetical protein DP2411 [Desulfotalea psychrophila LSv54]
gi|50877300|emb|CAG37140.1| unknown protein [Desulfotalea psychrophila LSv54]
Length = 277
Score = 76.5 bits (186), Expect = 3e-12, Method: Composition-based stats.
Identities = 37/263 (14%), Positives = 79/263 (30%), Gaps = 9/263 (3%)
Query: 7 LAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKG 66
AI + LH+ L + P + +VD I + + +
Sbjct: 19 FAIVLALHIGLALAVTLAPQFSHKKPR-FENIYTVDLIELAPPVKVQRTSKPQKIRAKSV 77
Query: 67 SSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQ 126
S + + +V + + K + K + S + +E L +
Sbjct: 78 SVAKVIPAKLTVADPVSIAPKKKKIKKIPPKLKENKKSADKAMARERRRLDQAIVAEKLA 137
Query: 127 KISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRV 186
+ + Q K+ P + + S + A V + +
Sbjct: 138 RQEA--EQAQRELEEEEKLFKNSKGTTSLPTTRTVKSGSHNRQKMTGVEAQWFARVTSHL 195
Query: 187 IANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKS 246
+ W +P + +L + +NQ G ++ G R+ + +K++ +
Sbjct: 196 MQFWALPELQEWDSRLTTTVIITVNQDGRIINNYFEHKSGN-----RIFDQFVKKSLQDA 250
Query: 247 QAFRLSPSTYKSWR-NITLFFVP 268
P+ K +R L F P
Sbjct: 251 DPLPKMPAAMKQYRFEFGLHFKP 273
>gi|49083696|gb|AAT51110.1| PA0406 [synthetic construct]
Length = 320
Score = 76.5 bits (186), Expect = 4e-12, Method: Composition-based stats.
Identities = 29/257 (11%), Positives = 81/257 (31%), Gaps = 18/257 (7%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPV 61
RL L I+ ILHV F+L + F+ P + L + + + + +
Sbjct: 42 RLGFTLFIAAILHVAFILGVGFSMPA----PSQISKTLEITLATFKSDKAPEKADYLAQM 97
Query: 62 VQFKGSSQENLVRDFSVQENG------DRFSDQTKTHATENETKRSSSSKGEQALKESAL 115
Q + E+ + + + + +E + + ++ A
Sbjct: 98 NQQGSGTLEHKAAPKTTEVAPFQDNQVKKVAPPATPKQARSEEAPKVAVTTTRQRQQKAP 157
Query: 116 LRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPS 175
+ ++ L + + + K+ + ++ +S R
Sbjct: 158 SKTQAQKAEQVAKPAPHFDSTQLSAEIASLEADLAKEQQAYAKRPRIHRLSAASTMRDKG 217
Query: 176 QDAIAIVRNRVIANWNIPSDFKRFKK---LRVKMHFQLNQKGFVLGKINVDVVGGTELVR 232
R ++ N+ + ++ +++ +N+ G + ++ G
Sbjct: 218 AWYKEDWRKKIERIGNLNYPDEARRQKLYGSLRLLVSINRDGTIYEVQVLESSGE----- 272
Query: 233 RMLRENARKAVIKSQAF 249
+L + A++ V + +
Sbjct: 273 PILDQAAQRIVRLAAPY 289
>gi|126725524|ref|ZP_01741366.1| tonB domain protein, putative [Rhodobacterales bacterium HTCC2150]
gi|126704728|gb|EBA03819.1| tonB domain protein, putative [Rhodobacterales bacterium HTCC2150]
Length = 377
Score = 76.5 bits (186), Expect = 4e-12, Method: Composition-based stats.
Identities = 34/266 (12%), Positives = 67/266 (25%), Gaps = 19/266 (7%)
Query: 25 FNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEE-PVVQFKGSSQENLVRDFSVQENGD 83
P ++ + + + S D
Sbjct: 109 VETPPEKPEIAPPKAEAAVESPPAPEPPATDEVAVIKPEEAAPKPADRVAPVPSALSQPD 168
Query: 84 RFSDQTKTHATENETKRSSSSKGE--------------QALKESALLRMPVSPYDKQKIS 129
D AT + E +A + + P + K +
Sbjct: 169 AIDDVITREATIAAPSDTPVEPIEEATAPEEAATEIVTEAEEIKTAPVRSIRPKSRPKRA 228
Query: 130 KATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIAN 189
+A + + + + ++ V
Sbjct: 229 EAVAEVDPKPETPAVDPLQAALSEALSEPDTQADTPAPVPSGPPLTGSEKEGLKVSVSNC 288
Query: 190 WNIPSDFKRFKKLRVKMHFQLNQKGFVLGKIN--VDVVGGTELVRRMLRENARKAVIKSQ 247
WN+ S ++ V + F + + V GG+E E R+A+I+
Sbjct: 289 WNVGSLSTDALQVTVTIGFSVKRDTRPENGSIYLVSATGGSESSINKAYEAGRRAIIRCG 348
Query: 248 A--FRLSPSTYKSWRNITLFFVPSKM 271
+ F L Y+ WR+I + F P +M
Sbjct: 349 SKGFPLPDDKYEQWRDIEITFNPERM 374
>gi|110833618|ref|YP_692477.1| hypothetical protein ABO_0757 [Alcanivorax borkumensis SK2]
gi|110646729|emb|CAL16205.1| conserved hypothetical protein [Alcanivorax borkumensis SK2]
Length = 258
Score = 76.5 bits (186), Expect = 4e-12, Method: Composition-based stats.
Identities = 27/256 (10%), Positives = 74/256 (28%), Gaps = 23/256 (8%)
Query: 17 FLLLLYFNFNV--QLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVR 74
LL F+++ L + + + K ++ V + + +
Sbjct: 18 VFGLLVFSWSTDPSLHKAPVVPPHVKATMVERSKQQKAPVAKPKKEVKPTPKPTAKPKPK 77
Query: 75 DFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNK 134
+ + K + + + E L+ + +++
Sbjct: 78 PKTEPKPKPTPKPDPKPAPAKKPEPKPKPKSAPKPKAEKKLVVPEIDTPSLEEMLAEEEL 137
Query: 135 EQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPS 194
E D Q + A+ ++ S + + V W IP
Sbjct: 138 EMDRQNKASAQPDKEMASNADQANAQVAS--------------FTDAIASHVGQQWRIPG 183
Query: 195 DFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPS 254
+++ +R ++ ++ G V+ G + ++ AV + +
Sbjct: 184 NYRNRDDIRTRVRIKMIPGGEVVNVSVAQSSGYPD-----FDDSVLNAVKLASPLPVPDG 238
Query: 255 TY--KSWRNITLFFVP 268
+ + +R++ + F P
Sbjct: 239 SLFNEQFRSLVIEFDP 254
>gi|152986040|ref|YP_001345901.1| hypothetical protein PSPA7_0506 [Pseudomonas aeruginosa PA7]
gi|150961198|gb|ABR83223.1| hypothetical protein PSPA7_0506 [Pseudomonas aeruginosa PA7]
Length = 297
Score = 76.5 bits (186), Expect = 4e-12, Method: Composition-based stats.
Identities = 28/257 (10%), Positives = 81/257 (31%), Gaps = 18/257 (7%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPV 61
RL L I+ ILHV +L + F+ P + L + + + + +
Sbjct: 20 RLGFTLFIAAILHVALILGVGFSMPA----PSQISKTLEITLATFKSDKTPEKADYLAQM 75
Query: 62 VQFKGSSQENLVRDFSVQENG------DRFSDQTKTHATENETKRSSSSKGEQALKESAL 115
Q + E+ + + + + +E ++ + ++ A
Sbjct: 76 NQQGSGTLEHKAAPKTTEVAPFQDNQVKKVAPPATPKQARSEEAPKAAVTTTRQRQQKAP 135
Query: 116 LRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPS 175
+ ++ L + + + K+ + ++ +S R
Sbjct: 136 SKTQAQKAEQVAKPAPQFDSSQLSAEIASLEADLAKEQQAYAKRPRIHRLSAASTMRDKG 195
Query: 176 QDAIAIVRNRVIANWNIPSDFKRFKK---LRVKMHFQLNQKGFVLGKINVDVVGGTELVR 232
R ++ N+ + ++ +++ +N+ G + ++ G
Sbjct: 196 AWYKEDWRKKIERIGNLNYPDEARRQKLYGSLRLLVSINRDGTIYEVQVLESSGE----- 250
Query: 233 RMLRENARKAVIKSQAF 249
+L + A++ V + +
Sbjct: 251 PILDQAAQRIVRLAAPY 267
>gi|212213384|ref|YP_002304320.1| TolA [Coxiella burnetii CbuG_Q212]
gi|212011794|gb|ACJ19175.1| TolA [Coxiella burnetii CbuG_Q212]
Length = 310
Score = 76.5 bits (186), Expect = 4e-12, Method: Composition-based stats.
Identities = 39/267 (14%), Positives = 84/267 (31%), Gaps = 16/267 (5%)
Query: 4 ENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQ 63
+ IS+ LHV+ LL L N + ++ V I Q
Sbjct: 48 RVPVGISIFLHVVLLLALISNLSSSETYRMNNL-NRPVKIIQAMAVSQ------TAIDNQ 100
Query: 64 FKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPY 123
K QE + +++ + + ++ ++ + L+
Sbjct: 101 TKQIKQEQEQKRAALEARRQEQKRKLALKKQQIIAQKHLAALKARQLQLKHEAEKKALEQ 160
Query: 124 DKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVR 183
K K + + Q ++ + +++ ++++ + A +
Sbjct: 161 KKAIALKKQRETKQRQLAVKQQQLQEKLLQQEMQQEKAQITKTQTAQMQGVLNQYKAQII 220
Query: 184 NRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAV 243
+ W +P++ K L + +L G VL G +L +AR AV
Sbjct: 221 QAIQQQWIVPANA--NKNLSCILLIRLAPGGAVLSVETARSSGD-----PVLDRSARVAV 273
Query: 244 IKSQAFRLSPS--TYKSWRNITLFFVP 268
K+ + T+ +R + L P
Sbjct: 274 FKASPLPVPKDSATFSEFRELRLTVRP 300
>gi|116054137|ref|YP_788580.1| TonB domain-containing protein [Pseudomonas aeruginosa UCBPP-PA14]
gi|218889148|ref|YP_002438012.1| putative tonB domain protein [Pseudomonas aeruginosa LESB58]
gi|115589358|gb|ABJ15373.1| putative tonB domain protein [Pseudomonas aeruginosa UCBPP-PA14]
gi|218769371|emb|CAW25131.1| putative tonB domain protein [Pseudomonas aeruginosa LESB58]
Length = 319
Score = 76.1 bits (185), Expect = 5e-12, Method: Composition-based stats.
Identities = 29/257 (11%), Positives = 82/257 (31%), Gaps = 18/257 (7%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPV 61
RL L I+ ILHV F+L + F+ P + L + + + + +
Sbjct: 42 RLGFTLFIAAILHVAFILGVGFSMPA----PSQISKTLEITLATFKSDKAPEKADYLAQM 97
Query: 62 VQFKGSSQENLVRDFSVQENG------DRFSDQTKTHATENETKRSSSSKGEQALKESAL 115
Q + E+ + + + + +E ++ + ++ A
Sbjct: 98 NQQGSGTLEHKAAPKTTEVAPFQDNQVKKVAPPATPKQARSEEAPKAAVTTTRQRQQKAP 157
Query: 116 LRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPS 175
+ ++ L + + + K+ + ++ +S R
Sbjct: 158 SKTQAQKAEQVAKPAPHFDSTQLSAEIASLEADLAKEQQAYAKRPRIHRLSAASTMRDKG 217
Query: 176 QDAIAIVRNRVIANWNIPSDFKRFKK---LRVKMHFQLNQKGFVLGKINVDVVGGTELVR 232
R ++ N+ + ++ +++ +N+ G + ++ G
Sbjct: 218 AWYKEDWRKKIERIGNLNYPDEARRQKLYGSLRLLVSINRDGTIYEVQVLESSGE----- 272
Query: 233 RMLRENARKAVIKSQAF 249
+L + A++ V + +
Sbjct: 273 PILDQAAQRIVRLAAPY 289
>gi|15595603|ref|NP_249097.1| TonB3 [Pseudomonas aeruginosa PAO1]
gi|9946260|gb|AAG03795.1|AE004477_12 TonB3 [Pseudomonas aeruginosa PAO1]
Length = 319
Score = 76.1 bits (185), Expect = 6e-12, Method: Composition-based stats.
Identities = 29/257 (11%), Positives = 81/257 (31%), Gaps = 18/257 (7%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPV 61
RL L I+ ILHV F+L + F+ P + L + + + + +
Sbjct: 42 RLGFTLFIAAILHVAFILGVGFSMPA----PSQISKTLEITLATFKSDKAPEKADYLAQM 97
Query: 62 VQFKGSSQENLVRDFSVQENG------DRFSDQTKTHATENETKRSSSSKGEQALKESAL 115
Q + E+ + + + + +E + + ++ A
Sbjct: 98 NQQGSGTLEHKAAPKTTEVAPFQDNQVKKVAPPATPKQARSEEAPKVAVTTTRQRQQKAP 157
Query: 116 LRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPS 175
+ ++ L + + + K+ + ++ +S R
Sbjct: 158 SKTQAQKAEQVAKPAPHFDSTQLSAEIASLEADLAKEQQAYAKRPRIHRLSAASTMRDKG 217
Query: 176 QDAIAIVRNRVIANWNIPSDFKRFKK---LRVKMHFQLNQKGFVLGKINVDVVGGTELVR 232
R ++ N+ + ++ +++ +N+ G + ++ G
Sbjct: 218 AWYKEDWRKKIERIGNLNYPDEARRQKLYGSLRLLVSINRDGTIYEVQVLESSGE----- 272
Query: 233 RMLRENARKAVIKSQAF 249
+L + A++ V + +
Sbjct: 273 PILDQAAQRIVRLAAPY 289
>gi|291612989|ref|YP_003523146.1| protein TolA [Sideroxydans lithotrophicus ES-1]
gi|291583101|gb|ADE10759.1| protein TolA [Sideroxydans lithotrophicus ES-1]
Length = 244
Score = 75.7 bits (184), Expect = 6e-12, Method: Composition-based stats.
Identities = 35/269 (13%), Positives = 78/269 (28%), Gaps = 38/269 (14%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPV 61
RL GL +++ +H++F LLYF Q E SV+
Sbjct: 12 RLSAGL-LALTVHLVFFTLLYFGVRWQSQP----SESYSVEMW----------------- 49
Query: 62 VQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVS 121
+NL V + + R + +
Sbjct: 50 --------DNLPNTEVVPKQEPAPAPPQPAKVEPAPPARVVPPVLPPVKADIEIRDKKSK 101
Query: 122 PYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAI 181
+ + + A +++ A + + ++ + E S+ ++ +
Sbjct: 102 KAEMKTKAAAKARQEAELKALEAYTQKQRQIDKARQAEQARIRAEVSAATQVLIESYQDK 161
Query: 182 VRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARK 241
+RN++ + SD L G ++ + G + A +
Sbjct: 162 IRNKIRRKMKMVSDVPDTA--EAIFKVTLLPDGMLMDDPVLVKSSG----YPAYDDAAER 215
Query: 242 AVIKSQAFRLSPS--TYKSWRNITLFFVP 268
A++ ++ + K +R + L P
Sbjct: 216 AILSAEPLPVPTDVALQKMFRELKLSIRP 244
>gi|13235475|emb|CAC33634.1| hypothetical protein [Rickettsia montanensis]
Length = 323
Score = 75.7 bits (184), Expect = 6e-12, Method: Composition-based stats.
Identities = 29/260 (11%), Positives = 80/260 (30%), Gaps = 22/260 (8%)
Query: 34 SRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHA 93
+ + +++ + K + + P + + + + E + A
Sbjct: 64 QKEAPIENEDVKKSEQSKPKEEPQDLPKEEKAKEPEAKTMEEKPKIEEKKPIEEPKSEEA 123
Query: 94 TE------------------NETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKE 135
E + E+ + + + K + +
Sbjct: 124 KEALPEKKEEVKEEKPKEEEKKQAEEKKKPEEKKEGKKPAEKHKEVKKKEPKTDELDSLL 183
Query: 136 QDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANW-NIPS 194
++L+ S + + + S ++++ ++ +W N+P+
Sbjct: 184 RNLEQSSEGDNVKSNKHQRSKKADNAKEAKGVYTDGLPLSDSETSLIKRQIERHWSNVPA 243
Query: 195 DFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELV--RRMLRENARKAVIKSQAFRLS 252
+ K++V + L++ G V + + L +NA +AV ++
Sbjct: 244 GVRGNNKVKVIISITLDKAGNVEQVKVNEKICPNIPASVCEALADNAIRAVWQASPIENL 303
Query: 253 -PSTYKSWRNITLFFVPSKM 271
+ + W+ I F PSK+
Sbjct: 304 DSARFNHWKEINFSFDPSKL 323
>gi|254237359|ref|ZP_04930682.1| hypothetical protein PACG_03433 [Pseudomonas aeruginosa C3719]
gi|126169290|gb|EAZ54801.1| hypothetical protein PACG_03433 [Pseudomonas aeruginosa C3719]
Length = 319
Score = 75.7 bits (184), Expect = 6e-12, Method: Composition-based stats.
Identities = 28/257 (10%), Positives = 81/257 (31%), Gaps = 18/257 (7%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPV 61
RL L I+ ILHV +L + F+ P + L + + + + +
Sbjct: 42 RLGFTLFIAAILHVALILGVGFSMPA----PSQISKTLEITLATFKSDKAPEKADYLAQM 97
Query: 62 VQFKGSSQENLVRDFSVQENG------DRFSDQTKTHATENETKRSSSSKGEQALKESAL 115
Q + E+ + + + + +E ++ + ++ A
Sbjct: 98 NQQGSGTLEHKAAPKTTEVAPFQDNQVKKVAPPATPKQARSEEAPKAAVTTTRQRQQKAP 157
Query: 116 LRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPS 175
+ ++ L + + + K+ + ++ +S R
Sbjct: 158 SKTQAQKAEQVAKPAPHFDSTQLSAEIASLEADLAKEQQAYAKRPRIHRLSAASTMRDKG 217
Query: 176 QDAIAIVRNRVIANWNIPSDFKRFKK---LRVKMHFQLNQKGFVLGKINVDVVGGTELVR 232
R ++ N+ + ++ +++ +N+ G + ++ G
Sbjct: 218 AWYKEDWRKKIERIGNLNYPDEARRQKLYGSLRLLVSINRDGTIYEVQVLESSGE----- 272
Query: 233 RMLRENARKAVIKSQAF 249
+L + A++ V + +
Sbjct: 273 PILDQAAQRIVRLAAPY 289
>gi|91776692|ref|YP_546448.1| hypothetical protein Mfla_2340 [Methylobacillus flagellatus KT]
gi|91710679|gb|ABE50607.1| Cell division and transport-associated protein TolA
[Methylobacillus flagellatus KT]
Length = 276
Score = 75.7 bits (184), Expect = 6e-12, Method: Composition-based stats.
Identities = 25/251 (9%), Positives = 82/251 (32%), Gaps = 9/251 (3%)
Query: 23 FNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENG 82
+F + P+ ++ +++ ++ + P +
Sbjct: 30 VSFEWKTQPPVMVAQVELWESLPADNPVVKPPQPQPVPEPPTPEPKPAPQPEPKPEPKPE 89
Query: 83 DRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGIS 142
Q + + K ++ + + + +K + L +
Sbjct: 90 PAPEPQAEIQVKKEPEKPKPPKPEKKPEPKKPEKKPDPKKPEPKKPVPKKEDKVKLDELK 149
Query: 143 FAEKKSIDTVVV-RPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKK 201
+++ ++ P +K+ +++ + + + +R+++ N + K
Sbjct: 150 KLQQELLEESSQPAPAQKQGPTQLGANVANQGEIDKYLGQIRDKIRRN--VNRQLCGTGK 207
Query: 202 LRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLS--PSTYKSW 259
+++ L G V+G + G E +A++++Q + P + +
Sbjct: 208 PELEVGISLMPTGEVIGVPRILKSSG----LPACDEAIERAILQAQPLPVPTQPDLFSKF 263
Query: 260 RNITLFFVPSK 270
R++ L F P++
Sbjct: 264 RDLRLKFRPNE 274
>gi|90424736|ref|YP_533106.1| hypothetical protein RPC_3245 [Rhodopseudomonas palustris BisB18]
gi|90106750|gb|ABD88787.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB18]
Length = 267
Score = 75.3 bits (183), Expect = 8e-12, Method: Composition-based stats.
Identities = 28/233 (12%), Positives = 71/233 (30%), Gaps = 10/233 (4%)
Query: 39 LSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENET 98
+ V+ + ++ + ++ + +Q + + +T A E
Sbjct: 41 IKVELVPADELTPPEVTPPQQSSPEPSAPAQPEAAAPPDPPSPQPKPASPQQTAALEKPE 100
Query: 99 KRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDK 158
+ + + Q + A + P D A + ++ P +
Sbjct: 101 PQQPTEQTAQNSPQPAPQQQPAPQPDWPAPMAAPQPPD--------LTERFHVMLGLPAE 152
Query: 159 KELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLG 218
+++ + +R + +P K+R+ + L +G +
Sbjct: 153 ALGKDVGGEAADAANIAASDTDKLRAHLRNCAALPGAVAPTDKVRIVIRIALTPEGRLAS 212
Query: 219 KINVDVVGGTELVRRMLRENARKAVIKSQAF-RLSPSTYKSWRNITLFFVPSK 270
+ + +L + A KA+ Q + L Y+ WR + + F P
Sbjct: 213 PPALIEASASMK-GPLLMQAAIKALQDCQPYAMLPAEKYQEWRVLDIGFTPKD 264
>gi|148284675|ref|YP_001248765.1| hypothetical protein OTBS_1221 [Orientia tsutsugamushi str.
Boryong]
gi|146740114|emb|CAM80287.1| hypothetical protein OTBS_1221 [Orientia tsutsugamushi str.
Boryong]
Length = 407
Score = 75.3 bits (183), Expect = 9e-12, Method: Composition-based stats.
Identities = 30/258 (11%), Positives = 70/258 (27%), Gaps = 16/258 (6%)
Query: 26 NVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRF 85
PI + + + + GS ++ + E
Sbjct: 153 PTLQSPPIEHKTNVP-TITESSASTTQPIIPKVTEPPLQSGSIEQKASSTSYIPEKIASA 211
Query: 86 SDQTKT--HATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISF 143
T T + + SA P+ P K+++ E
Sbjct: 212 PQATPKVIDPTLQSPPIEHKTNVPTITESSASTTQPIIPKVIDPPLKSSHIEDKTSVAHT 271
Query: 144 AEKKSIDTVVVRPDKKELLSKVE--------KSSRKRIPSQDAIAIVRNRVIANWNIPSD 195
+ + T + ++ + + + S ++ ++ A+WN
Sbjct: 272 TDIRHSITQKNNLVTSNVAAEQQYIANNHASRQNTNNTNSTSYTDAIKYQIQAHWNHTIG 331
Query: 196 FKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELV--RRMLRENARKAVIKSQAF-RLS 252
F + + L G + ++ + +N ++A+ + F L
Sbjct: 332 F--IPGISTVLMVNLTLDGTIENITDISHNCPNSNTTVCNVFIQNVKRAIWAASPFQELP 389
Query: 253 PSTYKSWRNITLFFVPSK 270
Y +W+ + L F P
Sbjct: 390 KEEYNAWQQLVLEFNPED 407
>gi|110634417|ref|YP_674625.1| TonB family protein [Mesorhizobium sp. BNC1]
gi|110285401|gb|ABG63460.1| outer membrane transport energization protein TonB [Chelativorans
sp. BNC1]
Length = 324
Score = 75.3 bits (183), Expect = 9e-12, Method: Composition-based stats.
Identities = 25/239 (10%), Positives = 59/239 (24%), Gaps = 7/239 (2%)
Query: 31 VPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTK 90
P + + + SS + +E + ++ + ++
Sbjct: 88 TPDETPPLQEAQDAPSVPERSSPKETLEADAEPPPTTHEKPASPEREQSPQQSSPEEKRT 147
Query: 91 THATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSID 150
+ + + +P + K + + A++ +
Sbjct: 148 LEPAAVASVVLPTENIPVPAPRPTQQKAKPAPPARAKTRDQQRPVATRKQTATAQEPATA 207
Query: 151 TVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFK-KLRVKMHFQ 209
Q A + + P +R RV +
Sbjct: 208 ARKPASRSSAGSDGGRSGGATAGELQAYTARLIRHIGRYKRYPQSAQRQGLSGRVGIAIT 267
Query: 210 LNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPSTYKSWR-NITLFFV 267
L+ G +G G + + A A ++ + P YK R ++L F
Sbjct: 268 LSPDGGFMGARISQSSG-----YSVFDQEALAATRRAIPYPRPPQGYKGGRLTVSLRFE 321
>gi|297568820|ref|YP_003690164.1| TonB family protein [Desulfurivibrio alkaliphilus AHT2]
gi|296924735|gb|ADH85545.1| TonB family protein [Desulfurivibrio alkaliphilus AHT2]
Length = 261
Score = 74.9 bits (182), Expect = 9e-12, Method: Composition-based stats.
Identities = 32/254 (12%), Positives = 73/254 (28%), Gaps = 11/254 (4%)
Query: 4 ENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDN-IYNEDYHSSKYKKIEEPVV 62
GL IS ++H +LLL + + + ++L +D I + ++ V
Sbjct: 5 WRGLIISCLVHGALVLLLV----AMVRLTPTEPDLLVIDFSISHGPGPAAAPAPPAVAEV 60
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
+ + E E + + + A+ +P
Sbjct: 61 AVAPVEPPVKPSVELAAAKPLKSEPEVLLPIAEPEPEPEPEPEPDPKPAPVAVPPLPQEL 120
Query: 123 YDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIV 182
++ + S + + S + + +
Sbjct: 121 PEQAPAAGPEPFSPPQSLAEIGPGASAPSEELAAGPAGGPSPPTEPPLVDQYLEVNFHYI 180
Query: 183 RNRVIANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARK 241
+ P +R + +V + F + + G V ++ G +L +NA +
Sbjct: 181 MEEIQRGIVYPRLARRMGWEGKVLVSFVILEDGGVENIEVMESSG-----FSLLDDNAVQ 235
Query: 242 AVIKSQAFRLSPST 255
+ KS F P+
Sbjct: 236 TIKKSAPFPSPPAR 249
>gi|330501374|ref|YP_004378243.1| TonB family protein [Pseudomonas mendocina NK-01]
gi|328915660|gb|AEB56491.1| TonB family protein [Pseudomonas mendocina NK-01]
Length = 298
Score = 74.9 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 30/262 (11%), Positives = 75/262 (28%), Gaps = 27/262 (10%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPV 61
RL L ++ LHV +L + F P + L + + K
Sbjct: 20 RLGFTLFLAAALHVALILGVGFTLES----PPEISKTLEITLSTFKSEEKPKEADFLAQD 75
Query: 62 VQFKGSSQENLVRDFSVQEN-----------GDRFSDQTKTHATENETKRSSSSKGEQAL 110
Q + E+ + ++ Q T + ++ + +Q
Sbjct: 76 NQQGSGTLEHAAAPKTTEQAPFQDSEVRKVTPPATPQQPATKQEAPKAAVATRAPQQQKT 135
Query: 111 KESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSR 170
PV + + ++ + + + RP L + +
Sbjct: 136 PVKREEAKPVPETRPAPVFDSAQLSAEIASLEAELAQEVQAYAKRPKIHRLNAASTMRDK 195
Query: 171 KRIPSQDAIAIVRNRVIANWNIPSDFKRFKK---LRVKMHFQLNQKGFVLGKINVDVVGG 227
R +V N+ ++ +++ +N+ G + ++ G
Sbjct: 196 GAW----YKDEWRKKVERIGNLNYPDDARRQRIYGSLRLLVSINRDGSLYEVQVLESSG- 250
Query: 228 TELVRRMLRENARKAVIKSQAF 249
+ +L + A++ V + +
Sbjct: 251 ----QAVLDQAAQRIVRLAAPY 268
>gi|126664526|ref|ZP_01735510.1| Periplasmic protein TonB, links inner and outer membranes
[Marinobacter sp. ELB17]
gi|126630852|gb|EBA01466.1| Periplasmic protein TonB, links inner and outer membranes
[Marinobacter sp. ELB17]
Length = 287
Score = 74.9 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 28/268 (10%), Positives = 78/268 (29%), Gaps = 22/268 (8%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPV 61
R L +++ +H + +L P + + + D + + P
Sbjct: 10 RFSFTLFMALAIHGVIVL----GITFAPETPPPSAQTMEITLSRFADEKAPEKADFLAPT 65
Query: 62 VQFKGSSQENLVRDFSVQENGDRFSDQT----------KTHATENETKRSSSSKGEQALK 111
Q ++E S Q ++ + + + + + + +
Sbjct: 66 NQQGSGTEEQAKELTSPQPVELNQTEVAHVQPEPQAQPEPQPVQQQAVVRTKALSARKVA 125
Query: 112 ESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRK 171
+ + V + + ++ + +P + + S
Sbjct: 126 KPEIRAEAVKELPTKPRLNLLQRSLEIASLEARLDAQQQAYSRKPRVLRVTAASTLRSSN 185
Query: 172 RIPSQDAIAIVRNRVIANWNIPSDFKRFKKL-RVKMHFQLNQKGFVLGKINVDVVGGTEL 230
Q+ ++ V + N N P++ + +++ L + G + + V G T
Sbjct: 186 AWYVQNWVSKVTR--VGNMNYPAEARNSGLYGDLRLLVTLRKDGSLKEVLVVQSSGST-- 241
Query: 231 VRRMLRENARKAVIKSQAFRLSPSTYKS 258
+L + A + V + + P
Sbjct: 242 ---LLDDAAIRIVRLAAPYPPFPKEMSR 266
>gi|134095583|ref|YP_001100658.1| putative tolA-related transport transmembrane protein
[Herminiimonas arsenicoxydans]
gi|133739486|emb|CAL62537.1| Conserved hypothetical protein, putative TonB domain [Herminiimonas
arsenicoxydans]
Length = 291
Score = 74.9 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 34/261 (13%), Positives = 79/261 (30%), Gaps = 19/261 (7%)
Query: 4 ENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQ 63
+ ++ +HV L+ + + Q P++ + + + + + +P +
Sbjct: 16 WRAITLAAAVHVALLVFFWIGIDWQSETPVAVKAEIWDMQAKEAAPLPPEPEPVPQPKPE 75
Query: 64 FKGSSQENLVRDFSVQENGD--------------RFSDQTKTHATENETKRSSSSKGEQA 109
K +E + DQ A E + K+ + + ++
Sbjct: 76 PKPVVKETPKAEPVAPPPPKVDIALEKEKKRKEQERKDQLAEEAKEKKLKQKAELEKQEK 135
Query: 110 LKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSS 169
LKE + K K ++Q +S + + + + KS
Sbjct: 136 LKEQEAEKKKAEQQKKADADKKRLQDQRDAELSEKRRAEELSRLTGAIGSGGTGQAAKSQ 195
Query: 170 RKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTE 229
+R ++ +N + +V+ +L G + G G
Sbjct: 196 GSGRADGAYADKIRAKIRSNTIFNVPPELSGNPQVEYDVELLPDGSLRGLRLRKSSG--- 252
Query: 230 LVRRMLRENARKAVIKSQAFR 250
E ++A+ +SQ F
Sbjct: 253 --LPGFDEAVKRAIERSQPFP 271
>gi|114319512|ref|YP_741195.1| TonB family protein [Alkalilimnicola ehrlichii MLHE-1]
gi|114225906|gb|ABI55705.1| outer membrane transport energization protein TonB [Alkalilimnicola
ehrlichii MLHE-1]
Length = 295
Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 37/256 (14%), Positives = 81/256 (31%), Gaps = 10/256 (3%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPV 61
RL + ++ ++H + L +F R ++ V ++ Y + E
Sbjct: 22 RLLVAMVVAALIHAAVIFGLGLSFP--EPERAERPPLIDVTLSRHDSGMPEDYDFLAESD 79
Query: 62 VQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVS 121
G+++ + + E ++ + E + +
Sbjct: 80 QLGGGAAETPEPHVPETPASRIARETPLPEPEPDPEPTPTAETPAEVPALTTEEAPVDRP 139
Query: 122 PYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAI 181
++ + + DL A + +PD + + SS + P+ + +
Sbjct: 140 ESEQAEREPEQRQPLDLAAARRAAINAPTPERAQPDARGPSRQFISSSTRSHPAAEYMRQ 199
Query: 182 VRNRVI--ANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLREN 238
RV N N P++ +R R+ + L G V ++ R+L E
Sbjct: 200 WVARVEDVGNRNYPNEARRRGLSGRLVLQVTLEPDGEVAAVRILEPSR-----HRLLDEA 254
Query: 239 ARKAVIKSQAFRLSPS 254
A + V S + P
Sbjct: 255 AVRIVRLSAPYAPVPD 270
>gi|327399146|ref|YP_004340015.1| hypothetical protein Hipma_0990 [Hippea maritima DSM 10411]
gi|327181775|gb|AEA33956.1| hypothetical protein Hipma_0990 [Hippea maritima DSM 10411]
Length = 236
Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 31/267 (11%), Positives = 78/267 (29%), Gaps = 39/267 (14%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
+ S+++H++F++ FN + + + + +V+ + ++
Sbjct: 5 SIFFSILVHLLFVVAFIL-FNKSHALFVKQAPIYTVNILQIKN----------------- 46
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
E + KT + + + K + K
Sbjct: 47 --------------EKPKQNKTTKKTSNVIVKKPKHKLKPKMKPKKLKPKPKPKNKIVKK 92
Query: 126 QKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNR 185
+ K Q+ + +K + + K + + S K+ S + I+++
Sbjct: 93 IDVETKIKKLQEQVKVEELREKLLRRKIETLKKHLASQQEAQKSYKKALSAGYVNIIQSS 152
Query: 186 VIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIK 245
+ NW + D + +L+ KG ++ + G A+
Sbjct: 153 IYNNWGVSKDVIDDNVFITTVKIKLDYKGNLINLRILKSSGNA-----YFDGTVIDAIRS 207
Query: 246 SQAFRLSPS--TYKSWRNITLFFVPSK 270
S+ F P + F +
Sbjct: 208 SEPFTPPPKEILSDGVVEFIITFDSRE 234
>gi|157964387|ref|YP_001499211.1| periplasmic protein TonB [Rickettsia massiliae MTU5]
gi|157844163|gb|ABV84664.1| Periplasmic protein TonB [Rickettsia massiliae MTU5]
Length = 328
Score = 73.8 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 33/290 (11%), Positives = 85/290 (29%), Gaps = 47/290 (16%)
Query: 29 LLVPISRREMLSVDNIYNEDYHSS--KYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFS 86
L + + ++ + + D + + K+ E P+ E ++ +
Sbjct: 39 LFEKLPEEQTITFEMLPVSDKSNIITQTKQKEAPIKNEDAKKSEQSKPKEEEPQDLPKAE 98
Query: 87 DQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKIS----------------- 129
K A E K K +S + + ++
Sbjct: 99 KAKKPEAKTMEEKPKIEEKKPIEEPKSEEAKEALPEKQEEVKEEKPKEEEKKQAEEKEKP 158
Query: 130 ------------------------KATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKV 165
+ + ++L+ + + +
Sbjct: 159 EEKKEETKPAEKPKEVKKKEPKTDELDSLLKNLEQSAEGDNVKSNKHQRSKKADNAKEAK 218
Query: 166 EKSSRKRIPSQDAIAIVRNRVIANW-NIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDV 224
+ S ++++ ++ +W N+P+ + K++V + L++ G V +
Sbjct: 219 GVYTDGLPLSDSETSLIKRQIERHWSNVPAGVRGNNKVKVIISITLDKAGNVEQAKVNEK 278
Query: 225 VGGTELV--RRMLRENARKAVIKSQAFRLS-PSTYKSWRNITLFFVPSKM 271
+ L +NA +AV ++ + + W+ I F PSK+
Sbjct: 279 ICPNIPASVCEALADNAIRAVWQASPIENLDSARFNHWKEINFSFDPSKL 328
>gi|291612977|ref|YP_003523134.1| TonB family protein [Sideroxydans lithotrophicus ES-1]
gi|291583089|gb|ADE10747.1| TonB family protein [Sideroxydans lithotrophicus ES-1]
Length = 290
Score = 73.8 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 33/257 (12%), Positives = 69/257 (26%), Gaps = 10/257 (3%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPV 61
RL + S LH L + F +PI + L V + ++
Sbjct: 15 RLSFAVLFSFGLHAFILFGIAFVIPDWKDIPIVSQP-LEVTLVNSKSSSRPDNANAYAQS 73
Query: 62 VQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVS 121
G + E+ + T T+ + +K +
Sbjct: 74 NLDGGGNTEDDRHAKTPFPVLGDAKRFTPEQTTQRLRQLQQENKRLLTRLKGDYSVAVNK 133
Query: 122 PYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAI 181
+ S A + + + ++ + + +K K + + +
Sbjct: 134 AQKQPSDSGADGHDLVQRSLEIVRLEAQISKSLSMYEKMPKRKYIGARTEEYRFAQYVED 193
Query: 182 VRNRVIANWNIPSDFKRFKK---LRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLREN 238
R +V N+ + + + + G V G +R+L +
Sbjct: 194 WRAKVERVGNMNYPEVARSQKIYGSLTLTVSIRSDGSVESIEINRPSG-----QRILDAS 248
Query: 239 ARKAVIKSQAF-RLSPS 254
A + V S F P
Sbjct: 249 AIRIVKLSAPFSPFPPD 265
>gi|239947580|ref|ZP_04699333.1| periplasmic protein TonB [Rickettsia endosymbiont of Ixodes
scapularis]
gi|239921856|gb|EER21880.1| periplasmic protein TonB [Rickettsia endosymbiont of Ixodes
scapularis]
Length = 323
Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 29/289 (10%), Positives = 86/289 (29%), Gaps = 46/289 (15%)
Query: 29 LLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQ 88
L + + ++ + + D + + ++ ++++ +E D ++
Sbjct: 35 LFEKLPEEQTITFEMLPVSDKSNIITQTKQKEAPIENEDAKKSEQSKPKEEEPQDLPKEE 94
Query: 89 TKTHATEN------------------------------------------ETKRSSSSKG 106
+ +
Sbjct: 95 KAKEPEAKTIEEKPKIEEKKPIEEPKPEEAKEALPEKKEEVKEEKPKEEEKKQAEEKKPE 154
Query: 107 EQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVE 166
E+ + + + K + + ++L+ S +
Sbjct: 155 EKKEGKKPAEKPKEVKKKEPKTYELDSLLKNLEQSSEGNNVKSNKHQRSKKADNAKEAKG 214
Query: 167 KSSRKRIPSQDAIAIVRNRVIANW-NIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVV 225
+ + S ++++ ++ +W N+P+ + K++V + L++ G V + +
Sbjct: 215 VYTDGLLLSDSETSLIKRQIERHWSNVPAGVRGNNKVKVIISITLDKAGNVEQAKVKEKI 274
Query: 226 GGTELV--RRMLRENARKAVIKSQAF-RLSPSTYKSWRNITLFFVPSKM 271
L +NA +AV ++ + P+ + W+ I F PSK+
Sbjct: 275 CPNIPASVCEALADNAIRAVWQASPIENIDPARFNHWKEINFSFDPSKL 323
>gi|104783975|ref|YP_610473.1| hypothetical protein PSEEN5057 [Pseudomonas entomophila L48]
gi|95112962|emb|CAK17690.1| conserved hypothetical protein; TonB domain [Pseudomonas
entomophila L48]
Length = 299
Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 28/258 (10%), Positives = 78/258 (30%), Gaps = 19/258 (7%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPV 61
RL L ++ ++H+ +L + F + P R + + + + + +
Sbjct: 21 RLGFTLFLAALVHLALILGVGFTV----VKPADIRHTMDITLATFKSEKAPEKADFQAQE 76
Query: 62 VQFKGSSQENLVRDFSVQ-------ENGDRFSDQTKTHATENETKRSSSSKGEQALKESA 114
Q + E + + + T ++S + ++
Sbjct: 77 NQQGSGTLEKKAVPKTTEVAPFQDSKINKVTPPPAARQETPPAPEKSVVATKAPKAQKVE 136
Query: 115 LLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIP 174
P L + + + K+ + ++ +S R
Sbjct: 137 PKPKENKPQTAPATKVVDFDSSQLSSQIASLEAELSNEQQLYAKRPRIHRLNAASTMRDK 196
Query: 175 SQDAIAIVRNRVIANWNIPSDFKRFKK---LRVKMHFQLNQKGFVLGKINVDVVGGTELV 231
R +V N+ + ++ ++M +N+ G + + ++ G
Sbjct: 197 GAWYKEEWRKKVERIGNLNYPEEARRQQLYGSLRMMVSINRDGSLYEVLVLESSG----- 251
Query: 232 RRMLRENARKAVIKSQAF 249
+ +L + A++ V + F
Sbjct: 252 QPVLDQAAQRIVRLAAPF 269
>gi|146305441|ref|YP_001185906.1| TonB family protein [Pseudomonas mendocina ymp]
gi|145573642|gb|ABP83174.1| TonB family protein [Pseudomonas mendocina ymp]
Length = 298
Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 32/258 (12%), Positives = 80/258 (31%), Gaps = 19/258 (7%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPV 61
RL L ++ LHV +L + F P + L + + +
Sbjct: 20 RLGFTLFLAAALHVAVILGVGFTLES----PPEISKTLEITLSTFKSKKAPDKADFLAQD 75
Query: 62 VQFKGSSQENLVRDFSVQENG---DRFSDQTKTHATENETKRSSSSKGEQALKESALLRM 118
Q + E+ + ++ T + R + K A + +
Sbjct: 76 NQQGSGTLEHTAAPKTTEQAPFQDSEVRKVTPPATPQQPATRQEAPKAAVATRAPQQQKT 135
Query: 119 PVSPYDKQKISKATNK----EQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIP 174
PV + + ++ L + + + V K+ + ++ +S R
Sbjct: 136 PVKREEAKPVATTRPAPVFDAAQLSAEIASLEAELAQEVQAYAKRPKIHRLNAASTTRDK 195
Query: 175 SQDAIAIVRNRVIANWNIPSDFKRFKK---LRVKMHFQLNQKGFVLGKINVDVVGGTELV 231
R +V N+ ++ +++ +N+ G + ++ G
Sbjct: 196 GAWYKDEWRKKVERIGNLNYPDDARRQRIYGSLRLLVSINRDGSLYEVQVLESSG----- 250
Query: 232 RRMLRENARKAVIKSQAF 249
+ +L + A++ V + +
Sbjct: 251 QAVLDQAAQRIVRLAAPY 268
>gi|83950089|ref|ZP_00958822.1| tonB domain protein, putative [Roseovarius nubinhibens ISM]
gi|83837988|gb|EAP77284.1| tonB domain protein, putative [Roseovarius nubinhibens ISM]
Length = 384
Score = 73.4 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 36/249 (14%), Positives = 67/249 (26%), Gaps = 12/249 (4%)
Query: 27 VQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFS 86
P + E + EE V ++Q + +E
Sbjct: 141 SLRPKPRPAPRVAPEQVAPPEPETAIDDVVREEVVADDTATTQREEAEATAPEEAATEIV 200
Query: 87 DQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEK 146
+ + S K A P + + K + E D + A
Sbjct: 201 TEAEEGGGPIAPTASMRPKTRPERPTQAAEAKPETQPETPKPATPKPAETDNSAVQDALA 260
Query: 147 KSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKM 206
++ + + + +R V + WN+ S V +
Sbjct: 261 AALGQASE--------PAPDTAPSGPPLTGGEKDALRVAVQSCWNVGSLSTEALGTTVVV 312
Query: 207 HFQLNQKGFVL--GKINVDVVGGTELVRRMLRENARKAVIKS--QAFRLSPSTYKSWRNI 262
+ + + + GG+ E AR+A+I+ F L Y W+ I
Sbjct: 313 TVDMGEDSKPINGSIKMIGSSGGSAAAAGQAFEAARRAIIRCGSSGFNLPIEKYGQWKTI 372
Query: 263 TLFFVPSKM 271
+ F P M
Sbjct: 373 EMTFNPENM 381
>gi|254427704|ref|ZP_05041411.1| TonB family C-terminal domain protein [Alcanivorax sp. DG881]
gi|196193873|gb|EDX88832.1| TonB family C-terminal domain protein [Alcanivorax sp. DG881]
Length = 292
Score = 73.4 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 31/260 (11%), Positives = 72/260 (27%), Gaps = 21/260 (8%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPV 61
RL + +++ H + + F + + + L V + +
Sbjct: 13 RLTFTVFLAVAFHGILI----FGVSFAPELQRAAPHTLEVTLAQHRSDSEPEEADFIAQS 68
Query: 62 VQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQA--------LKES 113
Q Q + ++ + E D + + + +T R + Q +
Sbjct: 69 NQEGSGDQADK-QELTTTEQADFADSKLENVQLKEKTTRERRERVSQQLVITTARDSEHK 127
Query: 114 ALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRI 173
K QDL + + +D K+ + ++ S K
Sbjct: 128 VNADQKEKTEPKPLKVAKQENLQDLSQQIASLQARLDEQKQAYAKRPRVRRLTSVSAKAH 187
Query: 174 PSQDAIAIVRNRVIANWNIPSDFKRFKK---LRVKMHFQLNQKGFVLGKINVDVVGGTEL 230
I R +V + V++ + + G + + G
Sbjct: 188 FEAVYIDGFRRKVEDMGTRNFPARALNSNTYGSVRLMVAIQKDGSLQEVRLLKSSG---- 243
Query: 231 VRRMLRENARKAVIKSQAFR 250
+ L + A ++V + F
Sbjct: 244 -HKFLDQAAIQSVRLAAPFD 262
>gi|327399224|ref|YP_004340093.1| TonB family protein [Hippea maritima DSM 10411]
gi|327181853|gb|AEA34034.1| TonB family protein [Hippea maritima DSM 10411]
Length = 284
Score = 73.4 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 36/261 (13%), Positives = 81/261 (31%), Gaps = 18/261 (6%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSS---------KYKK 56
+ S+ LH + L++ + L + + VD I K
Sbjct: 11 SIIFSLFLHSILFFLVFQFLKPKKLPTPPLPKQVFVDIIRLPKPKIKVQKKKQEEHKIAA 70
Query: 57 IEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALL 116
+ + + S+E + + ++ ++ + +TK + K L
Sbjct: 71 NIQREGRARVYSKEEKIPYGEAKPRLEKVKPHPESSKQKVKTKPKIAKNKTSKSKAVGLS 130
Query: 117 RMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQ 176
R S K K K + + + KKE + K
Sbjct: 131 RPKKSNLVKLKGGLFNEKLLSDLSKRGFSSGTSNQYKYKNAKKEATISIGTQELK---YA 187
Query: 177 DAIAIVRNRVIANWNIPSDF-KRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRML 235
+A ++N++ W P + ++ + + F + + G ++ + G +L
Sbjct: 188 SYMAKLKNKIQDVWVYPQQAIQTGQQGALLILFSIGKDGRLVRLKLIRSSG-----YPIL 242
Query: 236 RENARKAVIKSQAFRLSPSTY 256
A +A+ + F P +
Sbjct: 243 DNAALQAIKDASPFAPLPKRF 263
>gi|163733520|ref|ZP_02140963.1| hypothetical protein RLO149_17753 [Roseobacter litoralis Och 149]
gi|161393308|gb|EDQ17634.1| hypothetical protein RLO149_17753 [Roseobacter litoralis Och 149]
Length = 382
Score = 73.0 bits (177), Expect = 4e-11, Method: Composition-based stats.
Identities = 32/245 (13%), Positives = 62/245 (25%), Gaps = 4/245 (1%)
Query: 31 VPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTK 90
+ + E + F + E L +
Sbjct: 135 PVLDQPEADIAVLAPDISDTPVPQAAERVAPEAFAPPAPEALPDPVERDAVAPDATGDET 194
Query: 91 THATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSID 150
+ +++++ A ++
Sbjct: 195 QDPADATAPEAAATEIVTEADRPARAPEQSQRPPARRPEAPVRTAVAPPAEPETPSTDDA 254
Query: 151 TVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQL 210
+ + + S +R V WN+ S V + +
Sbjct: 255 VNAALQEALSNETPAPAVPQGPPLSAGEKDALRVEVSNCWNVGSLSTDALNTTVVVEVSM 314
Query: 211 NQKGFVL--GKINVDVVGGTELVRRMLRENARKAVIKSQA--FRLSPSTYKSWRNITLFF 266
+Q G + GG+E R E AR+A+I+ A F L Y W++I + F
Sbjct: 315 SQDGRPITGSIRMASSSGGSEAAARQAFEAARRAIIRCGARGFNLPVEKYSQWQDIEMTF 374
Query: 267 VPSKM 271
P +M
Sbjct: 375 NPERM 379
Score = 39.5 bits (90), Expect = 0.44, Method: Composition-based stats.
Identities = 25/178 (14%), Positives = 55/178 (30%), Gaps = 7/178 (3%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
+ G IS H++ L + F S+ +SV S++Y + V
Sbjct: 16 VHTGHYISGAGHLVLLGWMAFGDVFAAEPLPSQTTDVSV-------VSSAEYAALVAAVQ 68
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
+ ++ SV + + DQ + + + + + E S + +P
Sbjct: 69 PPQSVTEIAQPATPSVVPDAPQVPDQPEDQTDLTTPQATLTPEAETPPDVSEIEPLPPRA 128
Query: 123 YDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIA 180
+ E D+ ++ + E + + +DA+A
Sbjct: 129 DISDQAPVLDQPEADIAVLAPDISDTPVPQAAERVAPEAFAPPAPEALPDPVERDAVA 186
>gi|90022175|ref|YP_528002.1| LytB protein [Saccharophagus degradans 2-40]
gi|89951775|gb|ABD81790.1| TonB-like protein [Saccharophagus degradans 2-40]
Length = 253
Score = 73.0 bits (177), Expect = 4e-11, Method: Composition-based stats.
Identities = 43/229 (18%), Positives = 83/229 (36%), Gaps = 13/229 (5%)
Query: 49 YHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQ 108
++K ++ P + + QE + D TK E +R+ K E
Sbjct: 30 QPKIEHKLVKPPRHIEAKLVELKPKAKQAKQEEKPKKVDLTKKQRMLEEQQRAEKLKREA 89
Query: 109 ALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEK- 167
+K+ L + K+K +A + + + E++ + +K L + +
Sbjct: 90 EVKKRQELEAKKAAEAKKKKEQAAAEAKKKERQRKEEQQRQLRIQQEFEKALLEEQGQLL 149
Query: 168 SSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGG 227
+Q A++R RV +W+ P + +R ++ QL G V+ G
Sbjct: 150 EDSYATQAQSYAALIRQRVERSWSRPPSAR--NGMRCELSIQLVPSGRVIDVQISRSSGD 207
Query: 228 TELVRRMLRENARKAVIKSQAFR----LSPSTYKS-WRNITLFFVPSKM 271
A KAV K +AF + ++ +RN + F P +
Sbjct: 208 A-----AFDRAALKAVKKIEAFPELQDMPIGLFEREFRNFKMVFQPEDL 251
>gi|290475590|ref|YP_003468478.1| TonB-like colicin Js sensitive putative membrane protein (cjrB)
[Xenorhabdus bovienii SS-2004]
gi|289174911|emb|CBJ81712.1| TonB-like colicin Js sensitive putative membrane protein (cjrB)
[Xenorhabdus bovienii SS-2004]
Length = 267
Score = 73.0 bits (177), Expect = 4e-11, Method: Composition-based stats.
Identities = 34/254 (13%), Positives = 71/254 (27%), Gaps = 21/254 (8%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPV 61
+ ++ LH + + + + + V+ S + + I +
Sbjct: 14 HVTKSFLAAITLHALLVGWFIYTPENIDIEEFLPPPAVMVEL-------SLQTEAIHKIQ 66
Query: 62 VQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVS 121
Q G Q+ V + D+ + + ++ +
Sbjct: 67 NQPIGIEQQLSVASQ----QQESQVDEVNMPKLDVNENAHVLVHKPKKKQKEQEIPKKTQ 122
Query: 122 PYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAI 181
P + K + +++ + D + R S S A
Sbjct: 123 PVKRVKAKERESEKSRSSVAPTTSSATADNIASR----TAASYESNSDAIADAKAIWQAE 178
Query: 182 VRNRVIANWNIPSDFKRFKK-LRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENAR 240
V + P D +R + R + F +NQ G V+ + G L AR
Sbjct: 179 VSGHLNRYKKYPPDAQRRNRTGRPMVKFTVNQLGTVIDSELIQRSGTNS-----LDREAR 233
Query: 241 KAVIKSQAFRLSPS 254
+ ++Q L P
Sbjct: 234 LVLERAQPLPLPPD 247
>gi|90023276|ref|YP_529103.1| hypothetical protein Sde_3636 [Saccharophagus degradans 2-40]
gi|89952876|gb|ABD82891.1| TonB-like protein [Saccharophagus degradans 2-40]
Length = 294
Score = 73.0 bits (177), Expect = 4e-11, Method: Composition-based stats.
Identities = 30/264 (11%), Positives = 76/264 (28%), Gaps = 20/264 (7%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPV 61
RL L +++ LH M + F + L++ + + +
Sbjct: 15 RLSFTLFLALALHAMLV----FGCSFTADKGNKVAPTLNITLATHSAKVAPEKADFLAQH 70
Query: 62 VQFK-------GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESA 114
Q + + + + ++E R ++ ++ A
Sbjct: 71 NQEASGTLKTAKELTTTQAAEIADVNIREINPTPQQKAVQKSEQNRELIHTKQEQQRKVA 130
Query: 115 LLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIP 174
+ P + ++Q+ L + + K +D + K+ + ++ + K
Sbjct: 131 TVTTPTNRDNQQEREGQDADTPLLSPEAASLKAKLDKIKEDRAKEPRIRRLTSVATKASE 190
Query: 175 SQDAIAIVRNRVIANWNIPSDFKRFKKL---RVKMHFQLNQKGFVLGKINVDVVGGTELV 231
+ + +V N + + + + + G V G +
Sbjct: 191 DAEYLNRWAEKVEGIGNKHFPKEAIDRGIFGSLGLVVTIRPDGSVENIEISQPSGHS--- 247
Query: 232 RRMLRENARKAVIKSQAF-RLSPS 254
+L + A + V S F P
Sbjct: 248 --LLDDAALQIVKLSAPFAPFPPE 269
>gi|67458898|ref|YP_246522.1| periplasmic protein TonB [Rickettsia felis URRWXCal2]
gi|67004431|gb|AAY61357.1| Periplasmic protein TonB [Rickettsia felis URRWXCal2]
Length = 327
Score = 73.0 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 33/293 (11%), Positives = 85/293 (29%), Gaps = 50/293 (17%)
Query: 29 LLVPISRREMLSVDNIYNEDYHSS---KYKKIEEPVVQFKGSSQENLVRDFSVQENGDRF 85
L + + ++ + + D + +K + S+++ ++ Q++
Sbjct: 35 LFEKLPEEQTITFEMLPVSDKPNIITQTKQKEAPIENEDAKKSEQSKPKEEEPQDSPKEE 94
Query: 86 SDQTKTHATENETKRSSSSKGEQALKESALLRM--------------------------- 118
+ T E + K + K
Sbjct: 95 KTKELEAKTIEEKPKIEEKKPIEEPKPEEAKEALPEKKEEVKEEKPKEEEKKQTEEKKKP 154
Query: 119 ----------------PVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELL 162
+ K + + ++L+ S +
Sbjct: 155 EEKKEEVVVKKPEEKQKEVKKKEPKTDELDSLLKNLEQSSEGNNVKSNKHQRSKKVDNAK 214
Query: 163 SKVEKSSRKRIPSQDAIAIVRNRVIANW-NIPSDFKRFKKLRVKMHFQLNQKGFVLGKIN 221
+ S ++++ ++ +W N+P+ + K++V + L++ G V
Sbjct: 215 EAKGVYTDGLPLSDSETSLIKRQIERHWSNVPAGVRGNNKVKVIISITLDKAGNVEQAKV 274
Query: 222 VDVVGGTELV--RRMLRENARKAVIKSQAFRLS-PSTYKSWRNITLFFVPSKM 271
+ + L +NA +AV ++ P+ + W+ I F PSK+
Sbjct: 275 KERICPNIPASVCEALSDNAIRAVWQASPIENLDPARFNHWKEINFSFDPSKL 327
>gi|108763841|ref|YP_633892.1| TonB family protein [Myxococcus xanthus DK 1622]
gi|108467721|gb|ABF92906.1| TonB family protein [Myxococcus xanthus DK 1622]
Length = 262
Score = 72.6 bits (176), Expect = 5e-11, Method: Composition-based stats.
Identities = 28/255 (10%), Positives = 65/255 (25%), Gaps = 29/255 (11%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPV 61
R+ + +S++ H++ L+ + K I +
Sbjct: 17 RMSRFVVVSVVGHILVLVAAIAYARFSATPKVDL-----------------DTKPIRATL 59
Query: 62 VQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVS 121
V+ L+ + D K + S + P
Sbjct: 60 VRLGKPRDSKLLPRKEQLPPPPKKVDAPKPAPEAPPPEPSPAKVAVPIPG-----VQPEP 114
Query: 122 PYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAI 181
K K +D + F + + + +
Sbjct: 115 STSKPTPQKGETTGEDRRKRLFGAFDKTAKAAEPEEAEGAEDGDPDGDSATAEGERYFGL 174
Query: 182 VRNRVIANWNIPSDFKRFKKL--RVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENA 239
++++V ++++ ++L + + +L + G VL G +
Sbjct: 175 LQSQVRRHYSVADTIPESERLHLKAMVAVRLGRTGEVLDVSLTKASGND-----LFDSAV 229
Query: 240 RKAVIKSQAFRLSPS 254
AV K+ F P
Sbjct: 230 VTAVRKAAPFSPPPD 244
>gi|158522222|ref|YP_001530092.1| TonB family protein [Desulfococcus oleovorans Hxd3]
gi|158511048|gb|ABW68015.1| TonB family protein [Desulfococcus oleovorans Hxd3]
Length = 274
Score = 72.6 bits (176), Expect = 5e-11, Method: Composition-based stats.
Identities = 30/232 (12%), Positives = 58/232 (25%), Gaps = 16/232 (6%)
Query: 39 LSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENET 98
+SVD + S K + E +T+ T
Sbjct: 57 ISVDLVSLPGPASGPSKPAAVAGKTAPAPAPPVRESKAPAYEKPAVVPKPKAAVSTKKNT 116
Query: 99 KRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDK 158
+S ++ DL+ ++++
Sbjct: 117 APVKASPRTAPAAAPEAEDTGD--------AELAKTLADLEQKVSQTEQNVSISGQSNGP 168
Query: 159 KELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLG 218
R + + ++ NW P + L+ + + G ++
Sbjct: 169 AGGGGTGAGGGRAASALEIYNVEMGFQIRKNWVSPMGV--DENLQAVIAIHIAADGSLMD 226
Query: 219 KINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPSTYKSWRNITLFFVPSK 270
G E+ARKA++KS P + R + L F P
Sbjct: 227 LRFEKRSGND-----TYDESARKAILKSVPLPPLPKGFVLHR-VNLEFTPKD 272
>gi|119896999|ref|YP_932212.1| hypothetical protein azo0708 [Azoarcus sp. BH72]
gi|119669412|emb|CAL93325.1| conserved hypothetical secreted protein [Azoarcus sp. BH72]
Length = 300
Score = 72.6 bits (176), Expect = 6e-11, Method: Composition-based stats.
Identities = 33/260 (12%), Positives = 76/260 (29%), Gaps = 25/260 (9%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
A+S +LH L + + + +R L V + + ++
Sbjct: 30 AFALSGLLHATLLAVHFVSPP----PKPTRDRGLEVVLVNARHARAPDQAQVLAQANLDG 85
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGE--------QALKESALLR 117
G + + V S D + T + ++ ++ E A+ +
Sbjct: 86 GGTSDKAVTPKSPLPPQDARREGTALTEARRKVQQQERTQQELLTRVKQAPAVASTREHA 145
Query: 118 MPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQD 177
+P + + + I ++++ RP KK + ++ +
Sbjct: 146 EQPAPTPQASGLDLLDSAAAIARIEAQIDRNLEEYAKRPRKKFIGARAREYRFA-----Q 200
Query: 178 AIAIVRNRVIAN--WNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRML 235
+ R ++ N P + + + + G V G ++L
Sbjct: 201 YVEDWRLKIERIGTLNYPDAARGKLYGSLLLSVSIRADGSVASVEVTRSSG-----HKVL 255
Query: 236 RENARKAVIKSQAF-RLSPS 254
E A + V S + P
Sbjct: 256 DEAAMRIVNMSAPYAPFPPD 275
>gi|330721824|gb|EGG99798.1| TolA protein [gamma proteobacterium IMCC2047]
Length = 275
Score = 72.6 bits (176), Expect = 6e-11, Method: Composition-based stats.
Identities = 31/271 (11%), Positives = 90/271 (33%), Gaps = 13/271 (4%)
Query: 7 LAISMILHVMFLLLLYFNFNVQLLVPISRRE-MLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
+ ++++H + + FN+ + ++ + D +++ + + K
Sbjct: 10 VFQALLVHALVIAAFTFNWESDTGKELPPPPQVVQAKILTMADPIAARKEAARKKEAARK 69
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
S + + +E R + + K + + + + ++ + ++
Sbjct: 70 KSEAKRRAAEKRKREEAKRKAAENKKAEAKRKAEAKKKADAKKKAEAKRKADAEKKAAEE 129
Query: 126 QKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNR 185
+ + +++ + ++ + + + + D + RI +Q +VR R
Sbjct: 130 KAAQQRAEEKRRQEQLAREKAERLKQEQLLADSLADEIAAAQEEDDRIAAQSYDGLVRQR 189
Query: 186 VIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIK 245
++ NW+IP + + K+ G + G +A AV +
Sbjct: 190 IMENWHIPLSAR--NGMVAKVVVHFLPTGEINTVALYKSSGDA-----AFDRSAVLAVQR 242
Query: 246 SQAFR----LSPSTYKS-WRNITLFFVPSKM 271
L P + +R + F P +
Sbjct: 243 VGKIEELQQLEPRAFDKYFRKRIIKFRPEDL 273
>gi|319409338|emb|CBI82982.1| TolA protein [Bartonella schoenbuchensis R1]
Length = 373
Score = 72.2 bits (175), Expect = 6e-11, Method: Composition-based stats.
Identities = 26/231 (11%), Positives = 66/231 (28%), Gaps = 5/231 (2%)
Query: 43 NIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHAT--ENETKR 100
I + + + + + + L + E + K T + T
Sbjct: 137 EIKTQTPPQTTPETTSKTTEETPKNENITLPEEQQTPEIPVPTEPENKPQPTTVQLPTNV 196
Query: 101 SSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKE 160
+ + K+ + + ++ R ++E
Sbjct: 197 PRPTTKMKPKPTKHASSQSAQSSPKKGEQTIEDILAMDESNLINRARTQGGGAKRSKEQE 256
Query: 161 LLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPS-DFKRFKKLRVKMHFQLNQKGFVLGK 219
+ +Q + + + + + + V++ FQLN+ G ++G
Sbjct: 257 SQGARKDIGDTTKMAQTLVNLAGACIQKKLKLVAIGGNLNNRPVVRLQFQLNRNGMIIGT 316
Query: 220 INVDVVGGTELVRRMLRENARKAVIKSQAFR-LSPSTYKSW-RNITLFFVP 268
++ + G E + ++ + AV Q + L Y W + P
Sbjct: 317 PIIEPLKGDESQQAVMVQQVYAAVFACQPYPDLPRDQYNLWGQGFDFNVDP 367
Score = 48.4 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 19/168 (11%), Positives = 45/168 (26%), Gaps = 4/168 (2%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
++ LA S+ H+ L+ + P + E + + + +S P
Sbjct: 9 MKKSLAFSLAAHIAILIWGGIHLTHPTSFPQHQLEAIPITLAPLDQELASAQGSENAPFN 68
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
+ ++ + TK E ++ + S
Sbjct: 69 ERPAPKPTTRPQEKEDAHHIGDGKLDTKAPLKPKEKLQN----KNVETTPLSFGEKDASE 124
Query: 123 YDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSR 170
Q ++ +E Q ++ K E ++ E+
Sbjct: 125 TQAQSLTTPEKQEIKTQTPPQTTPETTSKTTEETPKNENITLPEEQQT 172
>gi|124514217|gb|EAY55732.1| probable TonB family protein [Leptospirillum rubarum]
Length = 278
Score = 72.2 bits (175), Expect = 6e-11, Method: Composition-based stats.
Identities = 35/240 (14%), Positives = 75/240 (31%), Gaps = 12/240 (5%)
Query: 7 LAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKG 66
L +S+ +H + + +L F Q E +V+ + N SK + PV K
Sbjct: 18 LFLSLSVHAVLVSILLF---YQSNKSKGFPEATTVELVSN--LPPSKTLPLPVPVHPAKK 72
Query: 67 SSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQ 126
+ V K ++ ++ + + + +
Sbjct: 73 APLPRPVHPVRASRPVPHLQVVKKARIPIVRKRKPIRKIRQKKVLVRPKMVHRLEKKNTS 132
Query: 127 KISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRV 186
+ ++ ++ + + V+ + ++ +R+
Sbjct: 133 RRKVVSSHPVRVKTAKSSPAPQKPVLHPSRVSNPHPVPVKMDISGQTFPTFLEHLLISRI 192
Query: 187 IANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKS 246
+NW P + LR + F L + G V + V G M + AR AV++S
Sbjct: 193 KSNWFPPPGTRG---LRATIQFTLLKDGRVSDQPVVIGSSGNG----MFDDAARMAVLRS 245
>gi|161830616|ref|YP_001596057.1| protein TolA [Coxiella burnetii RSA 331]
gi|161762483|gb|ABX78125.1| protein TolA [Coxiella burnetii RSA 331]
Length = 273
Score = 72.2 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 39/267 (14%), Positives = 87/267 (32%), Gaps = 14/267 (5%)
Query: 4 ENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQ 63
+ IS+ LHV+ LL L N + ++ V I + + + Q
Sbjct: 9 RVPVGISIFLHVVLLLALISNLSSSETYRMNNL-NRPVKIIQAMAVSQTAIDNQTKQIKQ 67
Query: 64 FKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPY 123
+ Q+ + QE + + + ++ ++ + L+
Sbjct: 68 EQEQEQKRAALEARRQEQKRKLAL----KKQQIIAQKHLAALKARQLQLKHEAEKKALEQ 123
Query: 124 DKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVR 183
K K + + Q ++ + +++ ++++ + A +
Sbjct: 124 KKAIALKKQRETKQRQLAVKQQQLQEKLLEQEMQQEKAQITKTQTAQMQGVLNQYKAQII 183
Query: 184 NRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAV 243
+ W +P++ K L + +L G VL G +L +AR AV
Sbjct: 184 QAIQQQWIVPANA--NKNLSCILLIRLAPGGAVLSVETARSSGD-----PVLDRSARVAV 236
Query: 244 IKSQAFRLSPS--TYKSWRNITLFFVP 268
K+ + T+ +R + L P
Sbjct: 237 FKASPLPVPKDSATFSEFRELRLTVRP 263
>gi|254482614|ref|ZP_05095852.1| TonB family C-terminal domain protein [marine gamma proteobacterium
HTCC2148]
gi|214036973|gb|EEB77642.1| TonB family C-terminal domain protein [marine gamma proteobacterium
HTCC2148]
Length = 288
Score = 72.2 bits (175), Expect = 8e-11, Method: Composition-based stats.
Identities = 31/260 (11%), Positives = 77/260 (29%), Gaps = 16/260 (6%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPV 61
++ N + I+ HV+ + FN + + V + +
Sbjct: 13 KMRNAVLIAACCHVVLAFAVSFNSDSSPRYNRQ----IEVTLATRPSQTAPDEAQHIAQQ 68
Query: 62 VQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLR---- 117
Q + + S + + S + A + + +S + +A +
Sbjct: 69 NQEGSGQEAEVDAVTSRNKEYRQQSPTPQQAAPQQVDADALASGELLSTVAAASRKVNAQ 128
Query: 118 MPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQD 177
+ + L + + +D + + ++ S K+
Sbjct: 129 QEQEETRRSATPGLNPEVDRLNQQLASLEAELDEQTQAYVNRPRVRRLTSVSAKQAVDAA 188
Query: 178 AIAIVRNRVIANWN---IPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRM 234
+A R R+ A N + + +++ +++ G + + G +
Sbjct: 189 YLADWRQRLEAVGNKYYPEASVRYGLYGDLRLLVVIHKDGSLEDIRILKSSG-----YAV 243
Query: 235 LRENARKAVIKSQAFRLSPS 254
L E A K V + + PS
Sbjct: 244 LDEAAIKIVRLAAPYSPFPS 263
>gi|329848729|ref|ZP_08263757.1| tonB-like protein [Asticcacaulis biprosthecum C19]
gi|328843792|gb|EGF93361.1| tonB-like protein [Asticcacaulis biprosthecum C19]
Length = 250
Score = 71.9 bits (174), Expect = 8e-11, Method: Composition-based stats.
Identities = 33/253 (13%), Positives = 75/253 (29%), Gaps = 9/253 (3%)
Query: 19 LLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSV 78
+L R ++V+ I D S + + D +V
Sbjct: 1 MLAIAYIGWATSAKPVRVTAVAVEII--SDVTSREMVATPVDELAVNKPEPVPSEADVAV 58
Query: 79 QENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDL 138
E + + + + A + + + + P K K + +
Sbjct: 59 PEPDAQPAPEPQKPAAPAKPDKKPEPIKKDKAPPDPKGKKAPVPDKKAPQPKTLDLDNLS 118
Query: 139 QGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKR 198
+ K + L+ +A + R+ W + D
Sbjct: 119 NPPPAPKNKGRANPNTQQRNGGSLNGSGPQDAGEKA---EMAALTKRLGRLWRLNCDIPG 175
Query: 199 FKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPST-YK 257
+++++ + FQL++ G ++ V ++ V + A AV + F Y+
Sbjct: 176 TRQVKIVVGFQLSRSGRLIKGPTW-VNRRSDAVWVSNSQLAIAAVNRGAPFTDLSDGLYE 234
Query: 258 SWRNITLFFVPSK 270
R++ + F K
Sbjct: 235 --RDLEVEFDAEK 245
>gi|119477234|ref|ZP_01617470.1| TolA protein [marine gamma proteobacterium HTCC2143]
gi|119449597|gb|EAW30835.1| TolA protein [marine gamma proteobacterium HTCC2143]
Length = 252
Score = 71.9 bits (174), Expect = 9e-11, Method: Composition-based stats.
Identities = 31/275 (11%), Positives = 91/275 (33%), Gaps = 35/275 (12%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLV-PISRREMLSVDNIYNEDYHSSKYKKIEEPV 61
L L ++ H + L + + + ++ + + + + + K K +
Sbjct: 5 LTLPLLATLFFHGVILAFIIIDAPEPEPLVKRAKIQYIKAELVTID---KPKAKPVTPVT 61
Query: 62 VQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVS 121
++ K + + ++ ++ + A + + + Q + +
Sbjct: 62 IKPKKTDDTAQKAALASKKKIEQQRKIKEAKAEQQKVVELQKKERYQKELQQQERQKAKR 121
Query: 122 PYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAI 181
+++++ + +K+ + + IA+
Sbjct: 122 LAEQRRLKEQQDKDFADAIAQENAESQRFNDTE-------------------LANSYIAL 162
Query: 182 VRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARK 241
+ + +NWN P + + V + Q+ G V+ ++ G + +A
Sbjct: 163 ITEVIESNWNRPPSAR--NSMEVVLAIQMVPTGEVVSVRVLNGSGNS-----AFDRSAEN 215
Query: 242 AVIKSQAFR----LSPSTYK-SWRNITLFFVPSKM 271
AV+K++ F L ++ ++R + L F P +
Sbjct: 216 AVLKAERFPELQQLPSRIFEANFRRLRLKFRPEDL 250
>gi|209364243|ref|YP_002268389.1| TolA [Coxiella burnetii Dugway 5J108-111]
gi|207082176|gb|ACI23227.1| TolA [Coxiella burnetii Dugway 5J108-111]
Length = 271
Score = 71.5 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 39/267 (14%), Positives = 84/267 (31%), Gaps = 16/267 (5%)
Query: 4 ENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQ 63
+ IS+ LHV+ LL L N + ++ V I Q
Sbjct: 9 RVPVGISIFLHVVLLLALISNLSSSETYRMNNL-NRPVKIIQAMAVSQ------TAIDNQ 61
Query: 64 FKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPY 123
K QE + +++ + + ++ ++ + L+
Sbjct: 62 TKQIKQEQEQKRAALEARRQEQKRKLALKKQQIIAQKHLAALKARQLQLKHEAEKKALEQ 121
Query: 124 DKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVR 183
K K + + Q ++ + +++ ++++ + A +
Sbjct: 122 KKAIALKKQRETKQRQLAVKQQQLQEKLLQQEMQQEKAQITKTQTAQMQGVLNQYKAQII 181
Query: 184 NRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAV 243
+ W +P++ K L + +L G VL G +L +AR AV
Sbjct: 182 QAIQQQWIVPANA--NKNLSCILLIRLAPGGAVLSVETARSSGD-----PVLDRSARVAV 234
Query: 244 IKSQAFRLSPS--TYKSWRNITLFFVP 268
K+ + T+ +R + L P
Sbjct: 235 FKASPLPVPKDSATFSEFRELRLTVRP 261
>gi|326797245|ref|YP_004315065.1| TonB family protein [Marinomonas mediterranea MMB-1]
gi|326548009|gb|ADZ93229.1| TonB family protein [Marinomonas mediterranea MMB-1]
Length = 287
Score = 71.5 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 32/264 (12%), Positives = 84/264 (31%), Gaps = 21/264 (7%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPV 61
R L I++ LH + + +F+ L P L + + ++ + K
Sbjct: 6 RFSVALFIAITLH--VVAVTLVSFDFSLGTPPH-PRTLEITLVQHK-TDAPKEADFLAQA 61
Query: 62 VQFKGSSQ--ENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMP 119
Q ++ + + + + + + + + ++
Sbjct: 62 NQLASGTEIRKQKLTTTETAQFIADEIQDITPPVQPQLASKQPVDQPDVIISKHTEAKLV 121
Query: 120 VSPYDKQKISKATNK-------EQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKR 172
++ +Q++ + L + + +D K+ + ++ S K
Sbjct: 122 INNDMEQELKTLEEQFLGETQIPSRLSSDIASLEALLDQQRQAYAKRPRIRRLTSVSAKS 181
Query: 173 IPSQDAIAIVRNRVIANWNIPSDFKRFKK---LRVKMHFQLNQKGFVLGKINVDVVGGTE 229
+ + R R+ NI + ++ ++++ L G+V + G
Sbjct: 182 ALDAEYLDNWRKRIERIGNIHYPSEAKRQNLFGQLRLAVILQPNGYVDEIDVLQSSG--- 238
Query: 230 LVRRMLRENARKAVIKSQAFRLSP 253
R+L + A + V S+ F P
Sbjct: 239 --LRILDDAAMRIVRLSEPFAPFP 260
>gi|332993884|gb|AEF03939.1| TolA-like protein [Alteromonas sp. SN2]
Length = 259
Score = 71.5 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 33/259 (12%), Positives = 88/259 (33%), Gaps = 10/259 (3%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
G+ S+ LH++ +L + + + V D + + Q +
Sbjct: 7 GIYKSIALHLVVAAVLLISVSFSPSPLPTMATNAPVIEATFIDAQAI--ADTKREQAQAE 64
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
++E + + + A + K+ + + KE L K
Sbjct: 65 AQAREAEAQRKKKEAQAAAAKRKRAAEAKQAREKKQAEEAEFKRQKELEQLAAQKEQQRK 124
Query: 126 QKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNR 185
++ +KA + + + + + + +++ + + ++ + A+++
Sbjct: 125 EREAKAKADAERKKKEAAENAEMERIMQEQLAQEQAAQQQRRGAQVLTEVERYTALIQQT 184
Query: 186 VIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIK 245
+ N + FK +++ +L G+V + GG + + R R+A
Sbjct: 185 IKRN---LYNDDSFKGKVCRLNIKLATTGYVTSIRIL---GGHDALCRAAESAVRRAEEL 238
Query: 246 SQAFRLSPSTYKSWRNITL 264
+P Y+ ++I L
Sbjct: 239 --PVSDAPDVYEQLKDINL 255
>gi|165918376|ref|ZP_02218462.1| protein TolA [Coxiella burnetii RSA 334]
gi|165917882|gb|EDR36486.1| protein TolA [Coxiella burnetii RSA 334]
Length = 269
Score = 71.5 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 37/267 (13%), Positives = 83/267 (31%), Gaps = 18/267 (6%)
Query: 4 ENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQ 63
+ IS+ LHV+ LL L N + ++ V I + + + Q
Sbjct: 9 RVPVGISIFLHVVLLLALISNLSSSETYRMNNL-NRPVKIIQAMAVSQTAIDNQTKQIKQ 67
Query: 64 FKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPY 123
+ + R + + ++ ++ + L+
Sbjct: 68 EQKRAVLEARRQ--------EQKRKLALKKQQIIAQKHLAALKARQLQLKHEAEKKALEQ 119
Query: 124 DKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVR 183
K K + + Q ++ + +++ ++++ + A +
Sbjct: 120 KKAIALKKQRETKQRQLAVKQQQLQEKLLQQEMQQEKAQITKTQTAQMQGVLNQYKAQII 179
Query: 184 NRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAV 243
+ W +P++ K L + +L G VL G +L +AR AV
Sbjct: 180 QAIQQQWIVPANA--NKNLSCILLIRLAPGGAVLSVETARSSGD-----PVLDRSARVAV 232
Query: 244 IKSQAFRLSPS--TYKSWRNITLFFVP 268
K+ + T+ +R + L P
Sbjct: 233 FKASPLPVPKDSATFSEFRELRLTVRP 259
>gi|153207182|ref|ZP_01945961.1| protein TolA [Coxiella burnetii 'MSU Goat Q177']
gi|212219434|ref|YP_002306221.1| TolA [Coxiella burnetii CbuK_Q154]
gi|120576843|gb|EAX33467.1| protein TolA [Coxiella burnetii 'MSU Goat Q177']
gi|212013696|gb|ACJ21076.1| TolA [Coxiella burnetii CbuK_Q154]
Length = 269
Score = 71.5 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 37/267 (13%), Positives = 83/267 (31%), Gaps = 18/267 (6%)
Query: 4 ENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQ 63
+ IS+ LHV+ LL L N + ++ V I + + + Q
Sbjct: 9 RVPVGISIFLHVVLLLALISNLSSSETYRMNNL-NRPVKIIQAMAVSQTAIDNQTKQIKQ 67
Query: 64 FKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPY 123
+ + R + + ++ ++ + L+
Sbjct: 68 EQKRAALEARRQ--------EQKRKLALKKQQIIAQKHLAALKARQLQLKHEAEKKALEQ 119
Query: 124 DKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVR 183
K K + + Q ++ + +++ ++++ + A +
Sbjct: 120 KKAIALKKQRETKQRQLAVKQQQLQEKLLQQEMQQEKAQITKTQTAQMQGVLNQYKAQII 179
Query: 184 NRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAV 243
+ W +P++ K L + +L G VL G +L +AR AV
Sbjct: 180 QAIQQQWIVPANA--NKNLSCILLIRLAPGGAVLSVETARSSGD-----PVLDRSARVAV 232
Query: 244 IKSQAFRLSPS--TYKSWRNITLFFVP 268
K+ + T+ +R + L P
Sbjct: 233 FKASPLPVPKDSATFSEFRELRLTVRP 259
>gi|229593125|ref|YP_002875244.1| hypothetical protein PFLU5754 [Pseudomonas fluorescens SBW25]
gi|229364991|emb|CAY53127.1| conserved hypothetical protein [Pseudomonas fluorescens SBW25]
Length = 301
Score = 71.5 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 20/260 (7%), Positives = 71/260 (27%), Gaps = 21/260 (8%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPV 61
RL L ++ ++H+ +L + F + P + L + + +
Sbjct: 21 RLGFTLFLAALIHLALILGVGFTL----VEPKQISKTLEITLATFKSEKKPEKADFLAQD 76
Query: 62 VQFK----GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLR 117
Q + + ++ + + + +
Sbjct: 77 NQQGSGTLDKKAVPKTTEVAPFQDNKVNKVTPPPAPKPEVKQAAPKAAVTTVAPKPQKAP 136
Query: 118 MPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQD 177
+ + + +++ S + +++ + +
Sbjct: 137 TQREKTKTEPTPEPVKPAPTFDSSTLSDEISSLEAELANEQQLYAKRPRIYRLNAASTMR 196
Query: 178 -----AIAIVRNRVIANWNIPSDFKRFKK---LRVKMHFQLNQKGFVLGKINVDVVGGTE 229
R +V N+ + ++ +++ +N+ G + ++ G
Sbjct: 197 DKGAWYKDEWRKKVERIGNLNYPDEARRQQIYGNLRLLVSINRDGTLYEVQVLESSG--- 253
Query: 230 LVRRMLRENARKAVIKSQAF 249
+ +L + A++ V + F
Sbjct: 254 --QPLLDQAAQRIVRLAAPF 271
>gi|170719656|ref|YP_001747344.1| TonB family protein [Pseudomonas putida W619]
gi|169757659|gb|ACA70975.1| TonB family protein [Pseudomonas putida W619]
Length = 300
Score = 71.5 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 31/259 (11%), Positives = 83/259 (32%), Gaps = 20/259 (7%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPV 61
RL L ++ ++H+ +L + F + P R+ + + + + +
Sbjct: 21 RLGFTLFLAALVHLALILGVGFTV----VKPAEIRQTMDITLATFKSEKPPEKADFQAQA 76
Query: 62 VQFKGSSQENLVRDFSVQ-------ENGDRFSDQTKTHATENETKRSSSSKGEQALKESA 114
Q + E + + + + S+ QA K
Sbjct: 77 NQQGSGTLEKKAVPTTTEIAPFQDSKINKVTPPPAAKPEVKPPPAPQKSAVATQAPKAQK 136
Query: 115 LLRMPVSPYDKQKISKATNKEQ-DLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRI 173
+ P + K + + + L + + + K+ + ++ +S R
Sbjct: 137 VEPKPKESKPQPKPAATPDFDSSQLSSQIASLEAELSNEQQMYAKRPRIHRLNAASTMRD 196
Query: 174 PSQDAIAIVRNRVIANWNIPSDFKRFKK---LRVKMHFQLNQKGFVLGKINVDVVGGTEL 230
R +V N+ + ++ ++M +N+ G + + ++ G
Sbjct: 197 KGAWYKEEWRKKVERVGNLNYPDEARRQQIYGNLRMMVSINRDGSLYEVLVLESSG---- 252
Query: 231 VRRMLRENARKAVIKSQAF 249
+ +L + A++ V + F
Sbjct: 253 -QAVLDQAAQRIVRLAAPF 270
>gi|34495563|ref|NP_899778.1| hypothetical protein CV_0108 [Chromobacterium violaceum ATCC 12472]
gi|34101418|gb|AAQ57787.1| conserved hypothetical protein [Chromobacterium violaceum ATCC
12472]
Length = 297
Score = 71.1 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 34/294 (11%), Positives = 75/294 (25%), Gaps = 39/294 (13%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNE------------------ 47
S + H + LL + P L+++
Sbjct: 13 TFIASALFHAGVIGLLL--WGGLQTTPPPSPAPLALELWTTAPPPPPAVTAPVAPAPAPQ 70
Query: 48 ---------DYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENET 98
+ ++ ++ + K + + + + E +
Sbjct: 71 PAPEPKPVVETPPAEVNLGKKDAPKPKHETPKPEPKPAAEPEPKKPKHAPKPAEPEKKVP 130
Query: 99 KRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDK 158
+++ ++ KE+ P + + N+ DL + + S
Sbjct: 131 EKAKPAEKAPDRKEAKAQTPPAAKPGHKTAKAYNNEADDLLSSLDSARTSGKPNARSDQA 190
Query: 159 KELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLG 218
+ S I +V+ +V IP + L V
Sbjct: 191 GSKHGVAGGAVNGSGVSAGWIDLVKAKVTPLVQIPPGI--AGNPAAVVRVTLLPTLEVRA 248
Query: 219 KINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPSTY---KSWRNITLFFVPS 269
V G + ++AV +++ F P+ +R TL F P
Sbjct: 249 VQLVKSSG-----VPAYDDAVQRAVWEAKTFPKLPAGANFNDGYRTFTLTFRPR 297
>gi|302343857|ref|YP_003808386.1| TonB family protein [Desulfarculus baarsii DSM 2075]
gi|301640470|gb|ADK85792.1| TonB family protein [Desulfarculus baarsii DSM 2075]
Length = 295
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 30/261 (11%), Positives = 61/261 (23%), Gaps = 20/261 (7%)
Query: 25 FNVQLLVPISRREMLSVDNIYNEDYHSS-KYKKIEEPVVQFKGSSQENLVRDFSVQENGD 83
+ V + SS ++ K + V+ D
Sbjct: 37 WPASQPDRQFFSPAYQVALVSGAALPSSGPPATAKKTAPPKKEMEKPKPAPKPEVKPKPD 96
Query: 84 RFSDQTKTHATENETKRSSS-SKGEQALKESALLRMPVSPYD--KQKISKATNKEQDLQG 140
+ + SK K P + + + K +
Sbjct: 97 VKPKPAPPKPEPKPEPKEAIGSKKTVEPKRVKREVKKAEPEPSYEDVLDQRLKKIKSKAE 156
Query: 141 ISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQD---------AIAIVRNRVIANWN 191
++ D + K + S V R+ W
Sbjct: 157 SRRQSEQLDDALSAIESKVQAGGGATGPSGAVAMPGGGELSTRFMLYYTEVWERIRRAWV 216
Query: 192 IPSDFKRF-KKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAF- 249
+P + ++N+ G + + G L ++A +AV ++ F
Sbjct: 217 LPEALAGDTSGAMAVVALRINRDGSLNKFWLEESSGNVR-----LDQSALRAVERAAPFP 271
Query: 250 RLSPSTYKSWRNITLFFVPSK 270
L + + L F P
Sbjct: 272 PLPADLLGPYHEVGLRFRPED 292
>gi|206889917|ref|YP_002248790.1| hypothetical protein THEYE_A0957 [Thermodesulfovibrio yellowstonii
DSM 11347]
gi|206741855|gb|ACI20912.1| hypothetical protein THEYE_A0957 [Thermodesulfovibrio yellowstonii
DSM 11347]
Length = 210
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 31/252 (12%), Positives = 76/252 (30%), Gaps = 56/252 (22%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPV 61
++ + L +S+ H +F+LLL F + + + ++ N
Sbjct: 4 KIYSSLFLSIFFHGLFILLLIFGIRNSVKDFKNLTYVTLIEETNNTLQT----------- 52
Query: 62 VQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVS 121
SS+ + + + + S
Sbjct: 53 --------------------------------------VSSTDEKNSLENIAQIKQKTFS 74
Query: 122 PYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAI 181
+K K T +++ L K+ ++ + + K +++ + S + +
Sbjct: 75 ENSTEKTRKITKEDEQLLKERLDALKAKKKILDKIQSGSIELKGQQNIKGEGISSSYLTV 134
Query: 182 VRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARK 241
+ + + +WNIP K L + ++ G ++ + G T + + K
Sbjct: 135 ISSLIRHHWNIPDTIP--KNLEAVISVRILLNGQIVIEGFEKSSGNT-----LFDSSVIK 187
Query: 242 AVIKSQAFRLSP 253
A+ S
Sbjct: 188 ALKNSSPLPPPK 199
>gi|294013405|ref|YP_003546865.1| putative TolA [Sphingobium japonicum UT26S]
gi|292676735|dbj|BAI98253.1| putative TolA [Sphingobium japonicum UT26S]
Length = 304
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 37/285 (12%), Positives = 80/285 (28%), Gaps = 31/285 (10%)
Query: 6 GLAISMILHVMFLLLLYFNF---NVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
GL ++ HV+ LL F L + ++ VD + + + P V
Sbjct: 8 GLGVATAGHVLLFGLLSSGFLATPNPLKLNSPPMDVSLVDEVALKSTAPQVSTQPPPPSV 67
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENET----------------------KR 100
+ E+ +
Sbjct: 68 APEQGPTEDAAPAPEPEPAPQPTPAPPAPRPAPPRPVAKPAPAKPAPPKKTAPAAKPKPA 127
Query: 101 SSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKE 160
K A A + P + + + S K + + D
Sbjct: 128 PEKPKPAAAAPAKASQKPAARPKPNAPARASGQGKAEKPKGSLLGKDFLKGIDTEADAPR 187
Query: 161 LLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKI 220
+ ++ ++ +++ N+PS + L + +L++ G V+G
Sbjct: 188 KPAPPPAAAMGPAQKAALDRLIGDQIYRYLNLPSGA-DVELLVAFLDVKLDRNGRVIGTP 246
Query: 221 NVD----VVGGTELVRRMLRENARKAVIKSQAFR-LSPSTYKSWR 260
V + + +E A +AV+++ F+ L Y+ W+
Sbjct: 247 EVIDVQGINASNRPQVSIYKERAVQAVLRASPFKGLPTEYYEQWK 291
>gi|189183649|ref|YP_001937434.1| hypothetical protein OTT_0742 [Orientia tsutsugamushi str. Ikeda]
gi|189180420|dbj|BAG40200.1| hypothetical protein OTT_0742 [Orientia tsutsugamushi str. Ikeda]
Length = 409
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 25/234 (10%), Positives = 66/234 (28%), Gaps = 12/234 (5%)
Query: 47 EDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKG 106
+ + + + +S N+ + + + ++ E K + ++
Sbjct: 178 QPITPKVTEPPLKIDSIEQKASTSNVPEKIASAPQATQKVIEPTLQSSLIEHKTNVATTT 237
Query: 107 EQALKESALLRMPVSPYDKQKISKATNKEQDLQG-------ISFAEKKSIDTVVVRPDKK 159
E + + V + S +
Sbjct: 238 ESNASTTQPIIPKVIDPPLKSSHIEDKTSVPHTNDTSHSITQKNNLATSNIAAEQQYIAN 297
Query: 160 ELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGK 219
S+ ++ S ++ ++ A+WN F + + L G +
Sbjct: 298 NHASRQNTNNTDNTNSTSYTDTIKYQIQAHWNHTIGF--IPGISTVLMVNLTLDGTIENI 355
Query: 220 INV--DVVGGTELVRRMLRENARKAVIKSQAF-RLSPSTYKSWRNITLFFVPSK 270
++ + V + +N ++A+ + F L Y +W+ + L F P
Sbjct: 356 TDISHNCPNNNTTVCNVFIQNVKRAIWAASPFQELPKEEYNAWQQLVLEFNPED 409
>gi|119896709|ref|YP_931922.1| hypothetical protein azo0418 [Azoarcus sp. BH72]
gi|119669122|emb|CAL93035.1| conserved hypothetical membrane protein [Azoarcus sp. BH72]
Length = 280
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 37/273 (13%), Positives = 68/273 (24%), Gaps = 13/273 (4%)
Query: 4 ENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQ 63
LA++ +H+ L L+F Q P S L+ + E
Sbjct: 14 WASLALTFAVHIGLALFLFFGIRWQSEPPASLEVELAAPPPSRAPEPVDVRPEPEPKPEP 73
Query: 64 FKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPY 123
K + + E + + + ++ + P P
Sbjct: 74 PKPTPPRPEPKPEPKPEPPKAAAKPEIATKAPEKKPEPPKPEPKKPEPPKPEPKKPEPPK 133
Query: 124 DKQKISKATNKEQDLQGISFAEK------KSIDTVVVRPDKKELLSKVEKSSRKRIPSQD 177
+ K + E + + + S+R + ++
Sbjct: 134 PEPKKPEPPKPEPKKPVEPPKDNYMDKLLERETERAELDKMMRADAARAASARNKAATEG 193
Query: 178 AIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRE 237
I +R +V N P G VL G L E
Sbjct: 194 YINAIRTKVRGNLLRPPGLSG--NPEAVFEVDQLPSGEVLNVRLKRSSG-----IPALDE 246
Query: 238 NARKAVIKSQAFRLSPSTYKSWRNITLFFVPSK 270
+A+ +S L R + L F P +
Sbjct: 247 AIERAIRRSSPLPLPDKGELFERTLELKFRPLE 279
>gi|242279945|ref|YP_002992074.1| protein TolA [Desulfovibrio salexigens DSM 2638]
gi|242122839|gb|ACS80535.1| protein TolA [Desulfovibrio salexigens DSM 2638]
Length = 315
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 40/317 (12%), Positives = 87/317 (27%), Gaps = 59/317 (18%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNED----------------- 48
GL IS++LH + L + + VD +
Sbjct: 5 GLFISLLLHAGLIFLALTWSISPPVKISLDMPVYKVDLVSLAPLPAAPVVKKAPAPKAAA 64
Query: 49 ---YHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSK 105
++ +P V K + T + + +
Sbjct: 65 KLSKPNAVAIPEAKPKVVPKAKPETVKAPAPKPAPKPKPKPKAKPKPDTTKISPKKIETT 124
Query: 106 GEQALKESALLRMPVSPYDKQKISKATNK------------------------------- 134
++ + A + K+++++ T
Sbjct: 125 SKKKPAKKAEKPVEKKTPPKKEVAEKTPPKKVEKKKVEKKPEVSAEDALAADLASLAEIV 184
Query: 135 EQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPS 194
E+ + A + ++ + + ++ Q +IV+ V NW P
Sbjct: 185 EKQEKAERQAVASDLASLTESAKATAVTGSADGTAGASGLVQVYASIVKEAVRKNWRYPV 244
Query: 195 DFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPS 254
F + + L ++ QL G + +D G + ++ A+ ++ P
Sbjct: 245 -FGQKQNLMARVQIQLKSSGEISNIKLLDSSGNVD-----FDDSVLTALRDTEVLPKPPG 298
Query: 255 TYKSWRNITLFFVPSKM 271
T S RNI + F +
Sbjct: 299 T--SIRNIIVNFNLHDL 313
>gi|224826205|ref|ZP_03699308.1| TonB family protein [Lutiella nitroferrum 2002]
gi|224601842|gb|EEG08022.1| TonB family protein [Lutiella nitroferrum 2002]
Length = 294
Score = 70.7 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/267 (10%), Positives = 70/267 (26%), Gaps = 14/267 (5%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP-VVQF 64
LA+S+++HV+ + + +P+ +SV ++ E V
Sbjct: 21 TLAVSVLVHVLLFAAGHITW--IRPIPLPETSTISVKLAQAPQKTPPPTLRLAEQNTVGA 78
Query: 65 KGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYD 124
+ + + + + + E+ + + PV
Sbjct: 79 GNTPAPGKLASHVPERITPGTAGPARHQQEAVVAAPHPPAANERLTAPTNDKQAPVRTPA 138
Query: 125 KQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQ--DAIAIV 182
Q L + + E + +
Sbjct: 139 PSSPPSPPITAQALLAQASVVARQQGDDDTVNRPDESGRTKGVYGITARGVEWARYVDDW 198
Query: 183 RNRVIANWNIPSDFKRFKK---LRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENA 239
R +V N+ + ++ +++ +N G + G +L A
Sbjct: 199 RLKVERIGNLNYPDEARRQQIFGSLELTVVVNADGTLRSVTVRRSSGHD-----VLDNAA 253
Query: 240 RKAVIKSQAF-RLSPSTYKSWRNITLF 265
+ V S F PS + + + +
Sbjct: 254 KNIVRLSAPFAPFPPSLAEKYSALEIV 280
>gi|254281785|ref|ZP_04956753.1| protein TolA [gamma proteobacterium NOR51-B]
gi|219677988|gb|EED34337.1| protein TolA [gamma proteobacterium NOR51-B]
Length = 240
Score = 70.7 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 33/274 (12%), Positives = 76/274 (27%), Gaps = 47/274 (17%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
+ LA +++LH + + L + + +
Sbjct: 7 IGFPLAATVLLHAVLIAFLTLRWP---------------ETKTVIAATPKPRAIQATIIS 51
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
+ ++ + + +T K++ K P
Sbjct: 52 AEQLRPKKQPPAPKATPKKKAPAPKKTPPKPKPQPKKQAPPPDTTVKQKPPEPTPEPKPE 111
Query: 123 YDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIV 182
+ + +++ T E D + + A++
Sbjct: 112 FTETELAALTRTEMDAVLDRE--------------------TTAAAGTNASMTDTVAAVI 151
Query: 183 RNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKA 242
+ V++ W P + + ++ QL G V+G + G T +A A
Sbjct: 152 QQAVVSRWTRPPSAR--NGMVARLEIQLVPTGDVVGVSVLQSSGNT-----AFDRSAISA 204
Query: 243 VIKSQAFR----LSPSTYKS-WRNITLFFVPSKM 271
V ++ F L P+ ++ +R L F P +
Sbjct: 205 VERAGRFPEVAQLKPNLFERDFRRFQLIFRPEDL 238
>gi|148263244|ref|YP_001229950.1| TonB family protein [Geobacter uraniireducens Rf4]
gi|146396744|gb|ABQ25377.1| TonB family protein [Geobacter uraniireducens Rf4]
Length = 282
Score = 70.7 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 28/253 (11%), Positives = 68/253 (26%), Gaps = 8/253 (3%)
Query: 7 LAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKG 66
L S++LHV L F + M+ + ++ E + ++ E + K
Sbjct: 14 LVFSVLLHVAVFALFIF-LPQEKKTIKQEPYMVELRDLP-EQKAAPPKEEKEAKRLAEKR 71
Query: 67 SSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQ 126
+ +E + + + E+ P +
Sbjct: 72 ERVAKEMAPKGEREVEKIAPPPAHIMPRQPQIGERRMPQQPVERGEAPQKEAPPGESLFK 131
Query: 127 KISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRV 186
+ L K ++ + + + + + I + V
Sbjct: 132 PKERKVPDISKLFPSPGKMAKLEESYRKKYGSEVEEGETKFLNSDDILFGSFLRRFETAV 191
Query: 187 IANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIK 245
W P + R + + N+KG ++ + G ++L + + + +
Sbjct: 192 YGVWRYPPEAARMGIQGVTPVKITFNRKGEIVNVEILQSSGS-----KILDDEVLRTLHQ 246
Query: 246 SQAFRLSPSTYKS 258
P Y
Sbjct: 247 IGRIGSFPKGYTK 259
>gi|37527385|ref|NP_930729.1| hypothetical protein plu3512 [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|36786819|emb|CAE15885.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
TTO1]
Length = 255
Score = 70.7 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 36/267 (13%), Positives = 81/267 (30%), Gaps = 19/267 (7%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPV 61
R+ GL S++LH L+ + ++ + SV++
Sbjct: 5 RIYIGLFASLLLHAGILVFMAWHL-----LRDDSANNQSVNSPIISMSVEMVASAAPAGQ 59
Query: 62 VQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVS 121
Q L + +V E+ + + + K + + +
Sbjct: 60 EQPVDPEPIPLPPEIAVAESPHEAKIALNKPVDRPRKQELPKKQADAKPKNKSQPQKELV 119
Query: 122 PYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAI 181
+ K+++ T L G + ++ + Q+ +
Sbjct: 120 EDPQPKLAEQTEGSSQLAGRDAVDSQAGARQA--------TTSQPMIGMGADELQNYQSA 171
Query: 182 VRNRVIANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENAR 240
+R + + P K+ K + V++ F L G + V G E L A
Sbjct: 172 LRREIEKHKRYPRRAKKMKQQGIVQVRFSLLDSGDLTNHQLVQSSGADE-----LDRAAL 226
Query: 241 KAVIKSQAFRLSPSTYKSWRNITLFFV 267
A+ ++++ L P+ + + F
Sbjct: 227 AAIQQARSVGLKPAGLPRDLTLAIEFN 253
>gi|83643443|ref|YP_431878.1| periplasmic protein TonB, links inner and outer membranes [Hahella
chejuensis KCTC 2396]
gi|83631486|gb|ABC27453.1| Periplasmic protein TonB, links inner and outer membranes [Hahella
chejuensis KCTC 2396]
Length = 275
Score = 70.3 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 25/266 (9%), Positives = 84/266 (31%), Gaps = 19/266 (7%)
Query: 7 LAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKG 66
+ ++ +H +L + F + V +D + Q
Sbjct: 1 MFFAIAVHAAIVLGITFTI----EPERPVPLTVEVTLAQFDDKEEPEDADFLAQSNQKGS 56
Query: 67 SSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQAL-------KESALLRMP 119
S+E+ + ++ R + + + E + + E+ + ++ ++ P
Sbjct: 57 GSEEDKKELTTTEQADFRDIETHEVAQLQPEAVKPREASAERQVVANKTSNRDMSMSEKP 116
Query: 120 VSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAI 179
++ + ++ + + + K+ ++++ S ++ S +
Sbjct: 117 KKDNPEEAPPEERSQLLQRSLEIASLEAKLSEQQQAYAKRPRVTRLTAVSARKTASAYYM 176
Query: 180 AIVRNRVIANWNIPSDFKRFKK---LRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLR 236
R + NI + K+ +V++ + G V + G ++L
Sbjct: 177 EEWRRELERIGNINYPEEARKRKLEGKVRVAVIIEPDGQVQEINILASSGA-----KILD 231
Query: 237 ENARKAVIKSQAFRLSPSTYKSWRNI 262
+ + + ++ F + ++
Sbjct: 232 DAVIRIIRLAEPFPPFTEEMRKESDL 257
>gi|110832972|ref|YP_691831.1| TonB [Alcanivorax borkumensis SK2]
gi|110646083|emb|CAL15559.1| TonB [Alcanivorax borkumensis SK2]
Length = 292
Score = 70.3 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 31/259 (11%), Positives = 68/259 (26%), Gaps = 19/259 (7%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPV 61
RL +++ H + + F + + + L V + +
Sbjct: 13 RLTFTAFLALAFHGILI----FGVSFAPELQRAAPHTLEVTLAQHHSDSEPEEADFIAQS 68
Query: 62 VQFKGSSQENLVR----DFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLR 117
Q Q + + + + Q K T+ R S ++S
Sbjct: 69 NQHGSGDQADKRELTTTEQADFADSQLEKVQLKEKTTQERRDRVSQELVITTAQDSEDKV 128
Query: 118 ---MPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIP 174
K QDL + + +D K+ + ++ S K
Sbjct: 129 SADQKKKTDPKPLKVAKQENLQDLSQQIASLQARLDEQKQAYAKRPRVRRLTSVSTKAHF 188
Query: 175 SQDAIAIVRNRVIANWNIPSDFKRFKK---LRVKMHFQLNQKGFVLGKINVDVVGGTELV 231
I R +V + ++ + + G + + G
Sbjct: 189 EAVYIDGFRRKVETMGTRNFPARALSSNTYGAARLMVAIQKDGTLKEVRLLKSSG----- 243
Query: 232 RRMLRENARKAVIKSQAFR 250
+ L + A ++V + F
Sbjct: 244 HKFLDQAAIQSVRLAAPFD 262
>gi|319407738|emb|CBI81385.1| TolA protein [Bartonella sp. 1-1C]
Length = 381
Score = 70.3 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 34/231 (14%), Positives = 64/231 (27%), Gaps = 4/231 (1%)
Query: 42 DNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRD-FSVQENGDRFSDQTKTHATENETKR 100
+ NE + + + V Q + E S T
Sbjct: 145 ELTKNEMKTPPQKPESTDQTVPPTALEQTKPEDPLQKILEELTEESPHESTPTMTLPDTI 204
Query: 101 SSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKE 160
S + V + + + K+ R +K E
Sbjct: 205 PIPSFKPKEKPVDPSHLQKVQKSPPKGEQTIEDILAMEKTQLINRTKTQGGGAKRSNKPE 264
Query: 161 LLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPS-DFKRFKKLRVKMHFQLNQKGFVLGK 219
L + +Q + IV + + + + + V++ F LN G V+G+
Sbjct: 265 ALGAQKNIGDSEKKAQTLVNIVGTCIQQKLKLVAIGGRLNNRPVVRLQFYLNNNGNVIGE 324
Query: 220 INVDVVGGTELVRRMLRENARKAVIKSQAF-RLSPSTYKSW-RNITLFFVP 268
+D + G E ++ + AV Q + L Y W + P
Sbjct: 325 PKIDPLKGEESQLAIMTQQVYAAVFSCQPYENLPRDQYNLWGQGFDFNVDP 375
Score = 42.2 bits (97), Expect = 0.068, Method: Composition-based stats.
Identities = 14/177 (7%), Positives = 40/177 (22%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
++ L +S LH + +F E+ + + S + P +
Sbjct: 9 MKKSLTLSFALHFILFSWGIIHFTPSSPFMQHPLEIAPITLSSLDQELSVQEGSSNAPPL 68
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
+ ++ + + + E +S + ++ A S
Sbjct: 69 EDSARKPTKQPQEKEDAHHFGEGTMDLQAPFQPKEKVQSMDATPSSFGQQDASDIPETSL 128
Query: 123 YDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAI 179
+ + T + K + + +
Sbjct: 129 KTQNLTTTETLLHPGPELTKNEMKTPPQKPESTDQTVPPTALEQTKPEDPLQKILEE 185
>gi|330961161|gb|EGH61421.1| TonB [Pseudomonas syringae pv. maculicola str. ES4326]
Length = 300
Score = 70.3 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 30/261 (11%), Positives = 81/261 (31%), Gaps = 26/261 (9%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP- 60
RL L I+ ++H++ +L + F + + P + L + + K
Sbjct: 23 RLGFTLLIAALIHLVIILGVGFTY----VKPEQISQTLEITLATFKSDEKPKQADYLAQD 78
Query: 61 ---------VVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALK 111
+ +++ +D V + + + +T S+S++ Q
Sbjct: 79 DQQGSGTLDKAETLKTTELAPYQDTKVNKVTPPPASKPVVKQEAPKTAVSTSAQSPQKTV 138
Query: 112 ESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRK 171
P ++ ++ + RP L + +
Sbjct: 139 AKREEVKPDPATKAAPTFDSSELSNEIASLEAELSNEQQAYAKRPKIHRLNAASTMRDKG 198
Query: 172 RIPSQDAIAIVRNRVIANWNIPSDFKRFKK---LRVKMHFQLNQKGFVLGKINVDVVGGT 228
R +V N+ + ++ +++ +N+ G + + ++ G
Sbjct: 199 AW----YKDDWRKKVERVGNLNYPEEARRQQIYGNLRLLVSINRDGSLYEVLVLESSG-- 252
Query: 229 ELVRRMLRENARKAVIKSQAF 249
+ +L + A++ V + F
Sbjct: 253 ---QPLLDQAAQRIVRLAAPF 270
>gi|37522975|ref|NP_926352.1| hypothetical protein gll3406 [Gloeobacter violaceus PCC 7421]
gi|35213978|dbj|BAC91347.1| gll3406 [Gloeobacter violaceus PCC 7421]
Length = 519
Score = 70.3 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 36/331 (10%), Positives = 72/331 (21%), Gaps = 74/331 (22%)
Query: 2 RLENGLAISMILHV--------------MFLLLLYFNFNVQLLVPISRREMLSVDNIYNE 47
L + S+ +H+ + L F +L P +
Sbjct: 185 NLYPAIVSSLFIHLLVAVAAAVLAIIIPLLFEALNIKFP-ELTPPEPPAPSMEFTLTDPT 243
Query: 48 DYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGE 107
D + L D V+ R+
Sbjct: 244 DKVKPPPNAPKSNANSVAKKRNRQLPTDAGVKGAPQARPTPQPRPRPTPPPPRAEQPTPR 303
Query: 108 QALKES--------------ALLRMPVSPYDKQKISKATNKEQ----------------- 136
+ + + K+ + Q
Sbjct: 304 PEQPKPTPAPKPKAAPPPSPEAVLPKIEEPPKETSPELAPLPQETTPEPAPPAPAPKRRA 363
Query: 137 -------------------DLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQD 177
L + + + + +
Sbjct: 364 SRSSATSGSSLAPASALGGPLSASRGSGGNGGLGESGTLNPGRDGDGSGIDAAQDVDFGP 423
Query: 178 AIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRE 237
+A ++ +V NW P + R + F +++ G ++ G R E
Sbjct: 424 YMAALQRKVKRNWIAP---EAGNSRRTVLLFTISRNGQIMNLRV-----GRSSGSRSSDE 475
Query: 238 NARKAVIKSQAFRLSPSTYKSWR-NITLFFV 267
+A +AV ++ F P+ YK R I F
Sbjct: 476 SAMEAVQRAAPFGPLPAAYKGDRIEIQFTFD 506
>gi|323698026|ref|ZP_08109938.1| protein TolA [Desulfovibrio sp. ND132]
gi|323457958|gb|EGB13823.1| protein TolA [Desulfovibrio desulfuricans ND132]
Length = 298
Score = 70.3 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 42/304 (13%), Positives = 80/304 (26%), Gaps = 41/304 (13%)
Query: 1 MRLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP 60
MR G +S++ H F N R + +VD I + K++
Sbjct: 1 MRQGLGFTLSLLFHAGIFAFALFGVNYSAPSVNLDRPVYNVDLISLAPPPAGPPVKVQAE 60
Query: 61 VVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSS----------------S 104
+ +V Q E E + S
Sbjct: 61 AQAPAETPAVPVVEAKPEQAEAKPVPVVEAKPEPEPEAQEISPKKVEKKTVVKKKEEPKP 120
Query: 105 KGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSK 164
K + K + +Q +++ Q A K+ + KK+ S
Sbjct: 121 KPKPEPKPEPKPKPKPKKTAQQLLAEGMAAAQAQAKREDAAKQKNLASELAALKKQEGSD 180
Query: 165 -----------------VEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMH 207
S+ IV + + +W F L V +
Sbjct: 181 VYAHGGQPGGQEGGREGGVAGGAGSGLSEVYALIVGSAIKKHWRY-PAFAGEANLMVTIE 239
Query: 208 FQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPSTYKSWRNITLFFV 267
L G +L ++ E +A +A+ +++ + R I + F
Sbjct: 240 ITLADDGKILSSKILEPSNNPE-----FDSSALRAIKETEYVEKPRTPRD--RLIRINFN 292
Query: 268 PSKM 271
++
Sbjct: 293 SQEL 296
>gi|78224722|ref|YP_386469.1| TonB-like [Geobacter metallireducens GS-15]
gi|78195977|gb|ABB33744.1| Cell division and transport-associated protein TolA [Geobacter
metallireducens GS-15]
Length = 251
Score = 69.9 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 33/267 (12%), Positives = 76/267 (28%), Gaps = 38/267 (14%)
Query: 6 GLAISMILHV---MFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
G+A S ++H F+LL +F+ L P + VD + +
Sbjct: 15 GVAASCVVHASVAAFVLLHHFSSPAPLEAP-----VYYVDVVNLPVAAPQAGSPVTGGSP 69
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
S + ++ + T +++ + + KES +
Sbjct: 70 PPAAPSPPPKPAEMALP---------------QKRTPTKAATPKKSSSKESDAGKAFEER 114
Query: 123 YDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIV 182
DK + + +++ + R K S
Sbjct: 115 MDKLQRAIDERRQEAALDSLRRKTAGSGRQPERVGTPGGTGKEAGSDYASYIQSRLTDAF 174
Query: 183 RNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKA 242
++ + + K V + ++ G + K G ++ E+ KA
Sbjct: 175 QSTI---------AHQSKAPEVVVKLTIDAGGHIARKRIERSSGD-----KIFEESVYKA 220
Query: 243 VIKSQAFRLSPSTYKSWRNITLFFVPS 269
+ +++ + P + + F P
Sbjct: 221 IARAEKTFVPPPGGGEF-DYGFIFRPQ 246
>gi|304313294|ref|YP_003812892.1| TonB-like protein [gamma proteobacterium HdN1]
gi|301799027|emb|CBL47270.1| TonB-like protein [gamma proteobacterium HdN1]
Length = 285
Score = 69.9 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 29/260 (11%), Positives = 79/260 (30%), Gaps = 18/260 (6%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPV 61
++ L ++++ H+ L + P L + + + +
Sbjct: 9 QMVVALTLALVAHIALLAA-----HFNFHPPQPATTSLEITLAAFKSEKAPEQADFLAQQ 63
Query: 62 VQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESA-----LL 116
Q ++ + + + + T TE S+K ++A
Sbjct: 64 NQEGSGTEAEALAPATQEIAPFATNKITPVQPTEQPASAPPSTKARILTTQAASTEHTPT 123
Query: 117 RMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQ 176
+ +P + + + + K+ + ++ +S + +
Sbjct: 124 QAQPTPLQPEPTPDFQPSLLRRSLEIASLEAQLREQQQTHAKRPIKRQLTAASTREVRDA 183
Query: 177 DAIAIVRNRVIANWNIPSDFKRFKK---LRVKMHFQLNQKGFVLGKINVDVVGGTELVRR 233
+ R +V N+ + K+ +++M +N+ G + + G +
Sbjct: 184 YYLDGWRRKVERIGNLNYPAQARKQQIYGQLRMMVSINKDGTLNDVRILQSSG-----QP 238
Query: 234 MLRENARKAVIKSQAFRLSP 253
+L E A V + F+ P
Sbjct: 239 ILDEAALDIVRLAAPFQAFP 258
>gi|300723543|ref|YP_003712848.1| TonB-like protein [Xenorhabdus nematophila ATCC 19061]
gi|297630065|emb|CBJ90702.1| TonB-like protein [Xenorhabdus nematophila ATCC 19061]
Length = 267
Score = 69.9 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 33/255 (12%), Positives = 71/255 (27%), Gaps = 21/255 (8%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPV 61
+ ++ LH + + L + + + + V+ + +
Sbjct: 14 HVTKSFLAAITLHALVVGWLVYKPAEVDIEELLPPPAVMVELSTQTEA--------IHKI 65
Query: 62 VQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVS 121
++ L QE+ + +N K ++ +++ PV
Sbjct: 66 QNQPVGVEQQLSTASKQQESKVDEVNMPTLDVNKNALLLVDKQKKKKKEQDAPKKTQPVK 125
Query: 122 PYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAI 181
Q+ ++ + + + S S+ A
Sbjct: 126 RVKAQEQESEKSRSSAAP-------TTSNAAAKNVTARTAASYESDSNAIADAKAVWQAE 178
Query: 182 VRNRVIANWNIPSDFKRFKK-LRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENAR 240
V + P D +R K+ R + F +NQ G V+ G L AR
Sbjct: 179 VTGHLNRYKKYPDDAQRRKRTGRPMVKFTVNQSGVVIDSELTRRSGTNS-----LDREAR 233
Query: 241 KAVIKSQAFRLSPST 255
+ ++Q P T
Sbjct: 234 MVLERAQPLPAPPDT 248
>gi|298529980|ref|ZP_07017382.1| TonB family protein [Desulfonatronospira thiodismutans ASO3-1]
gi|298509354|gb|EFI33258.1| TonB family protein [Desulfonatronospira thiodismutans ASO3-1]
Length = 263
Score = 69.9 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 35/268 (13%), Positives = 79/268 (29%), Gaps = 12/268 (4%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLV-PISRRE-MLSVDNIYNEDYHSSKYKKIEEPVVQ 63
+S ++HV +L+ F+ + P + V+ + + + + EP +
Sbjct: 5 SFLVSFLMHVALILVTLITFSKRPQEFPEDLTRHVYEVEL-SHFARQAPEPEPEPEPEPE 63
Query: 64 FKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPY 123
+ + D + E + E + P
Sbjct: 64 PDPEPDPEPEPEPEPEPEPDPEPEPEPEPDPEPVPRPDPEPDPEPEPEPEPEPEPEPEPE 123
Query: 124 DKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVR 183
+ + + E + E+ + ++ E + + AI
Sbjct: 124 PEPEPEPEPDPEPEPDPEPTPEEIRQQALAELQEEAEQRRSERPAREPSGALEVYQAIAA 183
Query: 184 NRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAV 243
+ NW R + L V++ +++ G +L V+ G +E +A +AV
Sbjct: 184 EHIKRNWRF-PRIGREEDLVVRVQVEIDSGGRILDYSVVEGSGRSE-----FDSSALRAV 237
Query: 244 IKSQAFRLSPSTYKSWRNITLFFVPSKM 271
+ P R + + F M
Sbjct: 238 EDTSRLPEPPG---DIRTLVIDFNLQDM 262
>gi|298488204|ref|ZP_07006240.1| TolA protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335]
gi|298157262|gb|EFH98346.1| TolA protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335]
Length = 332
Score = 69.9 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 32/319 (10%), Positives = 89/319 (27%), Gaps = 65/319 (20%)
Query: 10 SMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQ 69
++ LH++ +L+ +F + +P ++ ++ + + + ++ + K ++
Sbjct: 20 AVALHILIFGMLFVSFAMTPDLPEAKP-IVQATLYQLKSKSQATTQTNQKIAGEAKKTAA 78
Query: 70 ENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPY------ 123
+ Q+ ++ + A + + + + ++ ++A E+
Sbjct: 79 RQTEVEQLEQKKIEQLKQEAVKAAEQKKEEAAQKAEEQKAADEAKKAEQKAEEAKKADDA 138
Query: 124 ----------DKQKISKATNKE-------------------------------------Q 136
D +K+ + +
Sbjct: 139 KKADEAKKVADAKKLEEKQQADIAKKKAEEEAKKKAEEDAKKAAAEDAKKKAAADSAKKA 198
Query: 137 DLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDF 196
AE K + K + R + ++R R W+ P
Sbjct: 199 QEAARKSAEDKKAQALADLLSDKPERQQALADERGDETAGSFDDLIRVRASEGWSRPPSA 258
Query: 197 KRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFR----LS 252
+ + V + + G + G +A AV L
Sbjct: 259 R--NNMSVTLQIGMLPDGTIASVSIAKSSGDG-----PFDSSAVAAVKNIGRLTEMQGLK 311
Query: 253 PSTYKSWRNITLFFVPSKM 271
P+ + +R+ + F P +
Sbjct: 312 PADFAPYRSFKMTFTPGDL 330
>gi|268589709|ref|ZP_06123930.1| putative TonB protein [Providencia rettgeri DSM 1131]
gi|291314939|gb|EFE55392.1| putative TonB protein [Providencia rettgeri DSM 1131]
Length = 257
Score = 69.9 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 31/268 (11%), Positives = 86/268 (32%), Gaps = 16/268 (5%)
Query: 1 MRLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP 60
+R + +S++ H ++++ +++ + + + K++ +
Sbjct: 4 LRFNFAVMVSLLFH---FGIVFYCLSIEKTRSAQIYTPIQAAIVSVSLMQNVIEKQVNDT 60
Query: 61 VVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPV 120
++ K S + + + + + S ++ +K+ +
Sbjct: 61 ILNNKLSGGLLAESQQ-----NENAVIKVANKKSSHSDENKISDVQKKIIKQKEEKQTNK 115
Query: 121 SPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIA 180
+++ + + K D++ K + + + Q I
Sbjct: 116 KVTQQKEAQQKSEKNDDVKQEQHVGKNGNQSNAAGQKGAQRT--TSVGNAIDSTYQSYID 173
Query: 181 IVRNRVIANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENA 239
+R+ + + P + + VK+ FQL+ G + V+ L + A
Sbjct: 174 KLRSEIERHKRYPRKARNTNIQGVVKVSFQLSSLGEITMVRIVNSSTHN-----TLDQAA 228
Query: 240 RKAVIKSQAFRLSPSTYKSWRNITLFFV 267
AV KS++ P K + + F
Sbjct: 229 LAAVQKSRSVGTPPKGLKKLITMEIKFE 256
>gi|331005496|ref|ZP_08328874.1| hypothetical protein IMCC1989_2048 [gamma proteobacterium IMCC1989]
gi|330420688|gb|EGG94976.1| hypothetical protein IMCC1989_2048 [gamma proteobacterium IMCC1989]
Length = 317
Score = 69.5 bits (168), Expect = 4e-10, Method: Composition-based stats.
Identities = 24/264 (9%), Positives = 69/264 (26%), Gaps = 21/264 (7%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPV 61
RL + +++ +H + + F + P ++V +
Sbjct: 39 RLSFTIFLALAIHGLLI----FGLGFESSKPTESAPSVTVTLATRISSEKPEQADFMAQS 94
Query: 62 VQ--------FKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKES 113
Q K + + + F + D ++ A S +
Sbjct: 95 NQLGSGTESDIKEITTDVIPPPFESERINDTLINEQHKKAITEPDNTSIVTTQFSDTTAK 154
Query: 114 ALLRMPVSPYDKQKISKA--TNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRK 171
+ I + + T+ +P ++ L S +S +
Sbjct: 155 SEQLRDEELQPASGIDTLDIEALSTQIASLKAKLALQRQTLANKPRERVLTSVSTLASAE 214
Query: 172 RIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELV 231
+ + + K ++++ + G + G
Sbjct: 215 AGYLNEWTQRIEA-IGNQNFPQEALKNKLTGQLRLEVVIKHDGTIYEINLKQSSG----- 268
Query: 232 RRMLRENARKAVIKSQAF-RLSPS 254
+++ ++A++ V ++ F
Sbjct: 269 QKIFDDSAQQIVRQASPFAPFPAD 292
>gi|261342283|ref|ZP_05970141.1| putative periplasmic colicin Js sensitivity protein CjrB
[Enterobacter cancerogenus ATCC 35316]
gi|288315623|gb|EFC54561.1| putative periplasmic colicin Js sensitivity protein CjrB
[Enterobacter cancerogenus ATCC 35316]
Length = 258
Score = 69.5 bits (168), Expect = 4e-10, Method: Composition-based stats.
Identities = 41/253 (16%), Positives = 80/253 (31%), Gaps = 31/253 (12%)
Query: 5 NGLAISMILHVMFLL--LLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
G A S+I H L +L+F + P + S + + + + ++ V
Sbjct: 13 RGAATSVIAHAAIALPFILHFASPPPVASPAAVMVAWSPELEVSLLHPTLPPGISQQRKV 72
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
+ + ++ V D QT + + + K ++
Sbjct: 73 EAMSAEDAPQRKEMPVLPVVDEAEFQTVARKPVQKAVKKTEVKKTFHQQQREEK------ 126
Query: 123 YDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIV 182
G + ++ V + S+ + + A+V
Sbjct: 127 -----------------GNATLTSRAAPPVQAIVSTRNAAPLDTDSAVQSRQTIGWEALV 169
Query: 183 RNRVIANWNIPSDFKRFKK-LRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARK 241
+ ++ N P D +R K+ V + F +N +G VL VD G L A
Sbjct: 170 KGKINRMRNYPEDARRRKRTGTVVIAFSVNGRGEVLASRLVDSSGT-----LSLDRAALD 224
Query: 242 AVIKSQAFRLSPS 254
A+ K+Q P+
Sbjct: 225 ALQKAQPLPQPPA 237
>gi|115373707|ref|ZP_01461001.1| conserved hypothetical protein [Stigmatella aurantiaca DW4/3-1]
gi|310823647|ref|YP_003956005.1| TonB-like protein [Stigmatella aurantiaca DW4/3-1]
gi|115369254|gb|EAU68195.1| conserved hypothetical protein [Stigmatella aurantiaca DW4/3-1]
gi|309396719|gb|ADO74178.1| TonB-like protein [Stigmatella aurantiaca DW4/3-1]
Length = 258
Score = 69.5 bits (168), Expect = 4e-10, Method: Composition-based stats.
Identities = 27/256 (10%), Positives = 66/256 (25%), Gaps = 35/256 (13%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISR-REMLSVDNIYNEDYHSSKYKKIEEP 60
R+ + +S+ HV+ L + + + ++ +
Sbjct: 18 RMGLFIGLSIAGHVLLLAIAMVYTQLTSRPKVDPNPPVIRATLV---------------- 61
Query: 61 VVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPV 120
+ L+ + + S L+ +
Sbjct: 62 --RQGKPRDPKLLPRKEQLPPPPKEVKAPPAPPPQTPPPVEKVSVPVPGLQPAPPPPPQK 119
Query: 121 SPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIA 180
+ E + + A K+ + + + A
Sbjct: 120 GET---------SSEDRRKRLFGAFDKTSQKPTEPEELEGAEDGDPDGDSATAEGERYYA 170
Query: 181 IVRNRVIANWNIPSDFKRFKK--LRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLREN 238
++ +V N+N+ ++ L+ ++ +L + G VL V G + +
Sbjct: 171 LLSTQVRRNYNVADTIPETERLHLKAQVQMRLGRTGEVLETRLVAPSGND-----LFDSS 225
Query: 239 ARKAVIKSQAFRLSPS 254
AV K+ F P
Sbjct: 226 VLAAVKKASPFSPPPD 241
>gi|218533102|ref|YP_002423918.1| protein TolA [Methylobacterium chloromethanicum CM4]
gi|218525405|gb|ACK85990.1| protein TolA [Methylobacterium chloromethanicum CM4]
Length = 471
Score = 69.5 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 18/139 (12%), Positives = 48/139 (34%), Gaps = 7/139 (5%)
Query: 135 EQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPS 194
++ Q + ++ V+ + + +++ ++ ++ P
Sbjct: 334 SRETQTRAASQSTGSTGREVQRTASLGTASGTAQRLSPSLRGALVGMLQQQIERCYSAPP 393
Query: 195 DFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPS 254
+ + + +LN G + + V + G V + + + A +AV + F++
Sbjct: 394 GATQ-GVVLPMLDIRLNPDGSLTTEPRV-MRAGNNSVDQSIAQAALRAVRRCAPFKIPAQ 451
Query: 255 ---TYKSWRNI--TLFFVP 268
Y W+ I F P
Sbjct: 452 YAPYYNDWKAINAEFEFSP 470
>gi|254564125|ref|YP_003071220.1| TolA-TolQ-TolR complex membrane anchored protein [Methylobacterium
extorquens DM4]
gi|254271403|emb|CAX27416.1| membrane anchored protein in TolA-TolQ-TolR complex, tolerance
protein to group A colicins, required for OM integrity
[Methylobacterium extorquens DM4]
Length = 471
Score = 69.5 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 18/139 (12%), Positives = 48/139 (34%), Gaps = 7/139 (5%)
Query: 135 EQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPS 194
++ Q + ++ V+ + + +++ ++ ++ P
Sbjct: 334 SRETQTRAASQSTGSTGREVQRTASLGTASGTAQRLSPSLRGALVGMLQQQIERCYSAPP 393
Query: 195 DFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPS 254
+ + + +LN G + + V + G V + + + A +AV + F++
Sbjct: 394 GATQ-GVVLPMLDIRLNPDGSLTTEPRV-MRAGNNSVDQSIAQAALRAVRRCAPFKIPAQ 451
Query: 255 ---TYKSWRNI--TLFFVP 268
Y W+ I F P
Sbjct: 452 YAPYYNDWKAINAEFEFSP 470
>gi|320107207|ref|YP_004182797.1| TonB family protein [Terriglobus saanensis SP1PR4]
gi|319925728|gb|ADV82803.1| TonB family protein [Terriglobus saanensis SP1PR4]
Length = 262
Score = 69.5 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 31/270 (11%), Positives = 70/270 (25%), Gaps = 21/270 (7%)
Query: 2 RLENGLAISMILH-VMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP 60
+ L +++LH V F +++ I + +
Sbjct: 12 KTGASLVTALVLHGVAFGVIVGAGAFFHKKGDSWGDRSEQATAIQATMVSALPLPPKQPV 71
Query: 61 VVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPV 120
+S+ + +E + + + E+ +
Sbjct: 72 KDDSVLASETPSPAPITAKEKVEPPPSPKDVPIVVKKPVKIPPKVAEKPTPVVQRPQPTK 131
Query: 121 SPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIA 180
D+ + + + + + K S S +
Sbjct: 132 PVPDRAQTGETGGVKVAMSAV--------------DTKVGTASTNVTDSAFGQRYAYYVK 177
Query: 181 IVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENAR 240
+ +V W + K RV + F++ + G G L ++A
Sbjct: 178 QLTQKVAQQWYTATLDKSAPGHRVYITFRVERDGTPSQIQIAKPSGDAS-----LDQSAI 232
Query: 241 KAVIKSQAFRLSPSTYK-SWRNITLFFVPS 269
+A+ F P Y S+ N+ +F P
Sbjct: 233 RALQHIDTFGPLPDGYSGSYINVQYYFDPK 262
>gi|240141616|ref|YP_002966096.1| tolerance protein to group A colicins, single-stranded filamentous
DNA phage, required for OM integrity [Methylobacterium
extorquens AM1]
gi|240011593|gb|ACS42819.1| tolerance protein to group A colicins, single-stranded filamentous
DNA phage, required for OM integrity [Methylobacterium
extorquens AM1]
Length = 466
Score = 69.2 bits (167), Expect = 5e-10, Method: Composition-based stats.
Identities = 18/139 (12%), Positives = 48/139 (34%), Gaps = 7/139 (5%)
Query: 135 EQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPS 194
++ Q + ++ V+ + + +++ ++ ++ P
Sbjct: 329 SRETQTRAASQSTGSTGREVQRTASLGTASGTAQRLSPSLRGALVGMLQQQIERCYSAPP 388
Query: 195 DFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPS 254
+ + + +LN G + + V + G V + + + A +AV + F++
Sbjct: 389 GATQ-GVVLPMLDIRLNPDGSLTTEPRV-MRAGNNSVDQSIAQAALRAVRRCAPFKIPAQ 446
Query: 255 ---TYKSWRNI--TLFFVP 268
Y W+ I F P
Sbjct: 447 YAPYYNDWKAINAEFEFSP 465
>gi|163854157|ref|YP_001642200.1| protein TolA [Methylobacterium extorquens PA1]
gi|163665762|gb|ABY33129.1| protein TolA [Methylobacterium extorquens PA1]
Length = 471
Score = 69.2 bits (167), Expect = 5e-10, Method: Composition-based stats.
Identities = 18/139 (12%), Positives = 48/139 (34%), Gaps = 7/139 (5%)
Query: 135 EQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPS 194
++ Q + ++ V+ + + +++ ++ ++ P
Sbjct: 334 SRETQTRAASQSTGSTGREVQRTASLGTASGTAQRLSPSLRGALVGMLQQQIERCYSAPP 393
Query: 195 DFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPS 254
+ + + +LN G + + V + G V + + + A +AV + F++
Sbjct: 394 GATQ-GVVLPMLDIRLNPDGSLTTEPRV-MRAGNNSVDQSIAQAALRAVRRCAPFKIPAQ 451
Query: 255 ---TYKSWRNI--TLFFVP 268
Y W+ I F P
Sbjct: 452 YAPYYNDWKAINAEFEFSP 470
>gi|56476373|ref|YP_157962.1| putative TonB protein [Aromatoleum aromaticum EbN1]
gi|56312416|emb|CAI07061.1| putative TonB protein [Aromatoleum aromaticum EbN1]
Length = 309
Score = 69.2 bits (167), Expect = 6e-10, Method: Composition-based stats.
Identities = 33/259 (12%), Positives = 72/259 (27%), Gaps = 16/259 (6%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPV 61
RL+ LA+S++LH + L + F V P +R L V + + +
Sbjct: 33 RLQLALAVSVLLHALVLSI-SFTLPV---RPPNRDPGLEVVLVNARHARAPDKAEALAQA 88
Query: 62 VQFKGSSQENLVRDFSVQENGD-----RFSDQTKTHATENETKRSSSSKGEQALKESALL 116
G + + R S + + + + S + +
Sbjct: 89 NVDGGGNSDRQARPKSPLPPQEVHRDGNAPVEARKRVAPPAPLQRSVLTQPKVASTISRP 148
Query: 117 RMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQ 176
S + + + A ++ + K K + +
Sbjct: 149 PPRTSDAPPALAPTPSGLDLLNSAATVARLEAEIGRQLDDYAKRPRKKFIGARTREYRFA 208
Query: 177 DAIAIVRNRVIA--NWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRM 234
+ R+++ N P + + + + G + G +
Sbjct: 209 QYVEDWRHKIERVGTLNYPEAARGRLYGSLLLVVAIRADGSIERVEIRRSSGE-----PV 263
Query: 235 LRENARKAVIKSQAFRLSP 253
L E A++ V + F P
Sbjct: 264 LDEAAKRIVRLAAPFAPFP 282
>gi|254486526|ref|ZP_05099731.1| possible TolA protein [Roseobacter sp. GAI101]
gi|214043395|gb|EEB84033.1| possible TolA protein [Roseobacter sp. GAI101]
Length = 400
Score = 69.2 bits (167), Expect = 6e-10, Method: Composition-based stats.
Identities = 37/253 (14%), Positives = 74/253 (29%), Gaps = 7/253 (2%)
Query: 26 NVQLLVPISRREMLSV---DNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENG 82
V + P+ R +V D D + + P SQ+ + + E
Sbjct: 145 PVAVPRPVDRVAPEAVAKPDPEARPDVVEQQAATPDAPAETVVEESQQATAPEEATTEIV 204
Query: 83 DRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGIS 142
++ K ++ + +P + + +
Sbjct: 205 TEAAEAPKAAPNQSARPPARRPTPPAPQVAEKPETPVETPAKPEPKPTPKPAAETPAKPA 264
Query: 143 FAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKL 202
+ + + + S +R V + WN+ S
Sbjct: 265 VDTDAVAAALAEALGSQNTPAATAAAPSGPPLSAGEKESLRVAVSSCWNVGSLSSEALST 324
Query: 203 RVKMHFQLNQKGFVLGKIN--VDVVGGTELVRRMLRENARKAVIKSQA--FRLSPSTYKS 258
V + +NQ G GG++ E AR+A+I+ A ++L +
Sbjct: 325 TVVVSVAMNQDGTPQNGSITMTGSSGGSQAAANQAFEAARRAIIRCGARGYQLPVDKFGQ 384
Query: 259 WRNITLFFVPSKM 271
W+NI + F P +M
Sbjct: 385 WQNIEMTFNPERM 397
Score = 44.9 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 21/176 (11%), Positives = 53/176 (30%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
+ G IS H+ + L F + +SV + D + ++ ++
Sbjct: 1 MHTGHYISGAGHLGLIAFLLFGSIFTADPEPFEMQEVSVISGAEFDALVAASQQSDQATD 60
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
Q + + + + T + + + A+ E A P +
Sbjct: 61 QTPDQAPDISQPEAPAAPVEEPQVAATPDEEIQQPPPVQTETPPPDAVPEVAEQVPPPAA 120
Query: 123 YDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDA 178
+ ++ ++ ++ V E ++K + +R + Q A
Sbjct: 121 EVSDQAPESPEPPAEVAVLAPEVAPVAVPRPVDRVAPEAVAKPDPEARPDVVEQQA 176
Score = 36.8 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 8/131 (6%), Positives = 28/131 (21%)
Query: 34 SRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHA 93
V+ + ++ + V + + ++
Sbjct: 72 PEAPAAPVEEPQVAATPDEEIQQPPPVQTETPPPDAVPEVAEQVPPPAAEVSDQAPESPE 131
Query: 94 TENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVV 153
E + A+ P + ++ EQ + ++
Sbjct: 132 PPAEVAVLAPEVAPVAVPRPVDRVAPEAVAKPDPEARPDVVEQQAATPDAPAETVVEESQ 191
Query: 154 VRPDKKELLSK 164
+E ++
Sbjct: 192 QATAPEEATTE 202
>gi|188990623|ref|YP_001902633.1| TonB-like protein [Xanthomonas campestris pv. campestris str. B100]
gi|167732383|emb|CAP50575.1| TonB-like protein [Xanthomonas campestris pv. campestris]
Length = 291
Score = 69.2 bits (167), Expect = 6e-10, Method: Composition-based stats.
Identities = 40/259 (15%), Positives = 78/259 (30%), Gaps = 17/259 (6%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP- 60
RL L IS++LH + +L + F + + + + S + + + +
Sbjct: 16 RLTATLVISLLLHGLLILCVGFAVSEDAPLVPTLDVIFSQTSTPLTPKQADFLAQANQQG 75
Query: 61 -----VVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESAL 115
Q SQ +V T +T+ SS +GEQA+
Sbjct: 76 GGNHDTAQRPRDSQPGVVPQDRNGLAPQAQRATTVQAPLPTQTRVVSSRRGEQAVPTPQP 135
Query: 116 LRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPS 175
+ AE + ++ +S +
Sbjct: 136 NPQTDPLSPAD---AQRVQRDAEMARLAAEVHLRSEQYAKRPNRKFVSASTREYAYANYL 192
Query: 176 QDAIAIVRNRVIANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRM 234
+ + R + N N P + +R + +V + + + G V + G +
Sbjct: 193 RAWVD--RAERVGNLNYPDEARRRRLGGKVVITVGVRRDGSVESSRVLVSSGA-----PV 245
Query: 235 LRENARKAVIKSQAFRLSP 253
L A + V +Q F P
Sbjct: 246 LDAAALRVVQLAQPFPPLP 264
>gi|95930363|ref|ZP_01313100.1| TonB-like [Desulfuromonas acetoxidans DSM 684]
gi|95133615|gb|EAT15277.1| TonB-like [Desulfuromonas acetoxidans DSM 684]
Length = 287
Score = 69.2 bits (167), Expect = 6e-10, Method: Composition-based stats.
Identities = 32/252 (12%), Positives = 73/252 (28%), Gaps = 14/252 (5%)
Query: 13 LHVMFLLLLYFNFNVQLLVPISRREM-LSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQEN 71
+H LL FN P +++ + + V + K G+
Sbjct: 20 VHAALLL---FNVQWPEEKPSAKKPILVEVQPTKPVQETAIPEKTAPPQQAPRTGAVDHQ 76
Query: 72 LVRDFSVQ----ENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQK 127
++++ + E+ Q + + + + P + +K+
Sbjct: 77 VIKEQAPPGQEMEDSSPKMAQPAPAKPKTAPPPKPDKVEKPRPTVTVDPQQPDTIPEKKP 136
Query: 128 ISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVI 187
+ +Q LQ + A + + + + + ++
Sbjct: 137 TEPLPSLDQLLQTANNAAANITQRAQTKARPNVESGDDLLLNMREDKLFSFFSRFKKQIY 196
Query: 188 ANWNIPSDF-KRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKS 246
WN P + K+ ++ + +N+ G V V G L A A+ K
Sbjct: 197 GVWNYPEEAMKKRQQGVALLKVVINRDGSVEDVDLVSASG-----FERLDREAIAAIFKG 251
Query: 247 QAFRLSPSTYKS 258
+ P +Y
Sbjct: 252 GPYGALPDSYPE 263
>gi|301385809|ref|ZP_07234227.1| tonB domain protein [Pseudomonas syringae pv. tomato Max13]
gi|302133699|ref|ZP_07259689.1| tonB domain protein [Pseudomonas syringae pv. tomato NCPPB 1108]
gi|331018476|gb|EGH98532.1| tonB domain protein [Pseudomonas syringae pv. lachrymans str.
M302278PT]
Length = 300
Score = 68.8 bits (166), Expect = 7e-10, Method: Composition-based stats.
Identities = 29/261 (11%), Positives = 80/261 (30%), Gaps = 26/261 (9%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP- 60
RL + I+ ++H+ +L + F + + P + L + + K
Sbjct: 23 RLGFTIMIAALIHLAVILGVGFTY----VKPEQISQTLEITLATFKSEEKPKQADFLAQD 78
Query: 61 ---------VVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALK 111
+ +++ +D V + S + +T ++++ Q
Sbjct: 79 DQQGSGTLDKAETLKTTELAPYQDTKVNKVTPPPSSKPVVKQEAPKTAVATTAASPQKTV 138
Query: 112 ESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRK 171
P +++ ++ + RP L + +
Sbjct: 139 AKRDEVKPEPTTKAAPTFDSSDLSNEIASLEAELSTEQQLYAKRPKIHRLNAASTMRDKG 198
Query: 172 RIPSQDAIAIVRNRVIANWNIPSDFKRFKK---LRVKMHFQLNQKGFVLGKINVDVVGGT 228
R +V N+ + +K +++ +N+ G + + ++ G
Sbjct: 199 AW----YKDDWRKKVERVGNLNYPEEARRKQIYGNLRLLVSINRDGSLYEVLVLESSG-- 252
Query: 229 ELVRRMLRENARKAVIKSQAF 249
+ +L + A++ V + F
Sbjct: 253 ---QPLLDQAAQRIVRLAAPF 270
>gi|152982653|ref|YP_001354156.1| TolA-related transport transmembrane protein [Janthinobacterium sp.
Marseille]
gi|151282730|gb|ABR91140.1| TolA-related transport transmembrane protein [Janthinobacterium sp.
Marseille]
Length = 292
Score = 68.8 bits (166), Expect = 7e-10, Method: Composition-based stats.
Identities = 29/204 (14%), Positives = 57/204 (27%), Gaps = 8/204 (3%)
Query: 52 SKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALK 111
K EPV L R+ +E D+ E + K+ + +Q L
Sbjct: 80 IKETPKAEPVEPPAPKVDIALEREKKRKEQ--ERKDKLAEEEKEKKLKQQAEQDKQQKLD 137
Query: 112 ESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRK 171
+ A + K + K +E + + + + KS
Sbjct: 138 KQAADKKAAEQQQKADLEKKRKQEAADAAVRDKIRAEEMRRLTGAVGSGGTGEAAKSQGS 197
Query: 172 RIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELV 231
+R ++ N + +L G + G+ + G
Sbjct: 198 GRADSGYADKIRAKIRQNTTFIVPDGLSGNPAAEFDVELLPDGSLRGEPRLRKSSGVTGF 257
Query: 232 RRMLRENARKAVIKSQAFRLSPST 255
+ ++A+ +SQ F P
Sbjct: 258 ----DDAVKRAIERSQPF--PPDK 275
>gi|254515813|ref|ZP_05127873.1| TonB family protein [gamma proteobacterium NOR5-3]
gi|219675535|gb|EED31901.1| TonB family protein [gamma proteobacterium NOR5-3]
Length = 283
Score = 68.8 bits (166), Expect = 7e-10, Method: Composition-based stats.
Identities = 32/259 (12%), Positives = 72/259 (27%), Gaps = 17/259 (6%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPV 61
RL + I+ LHV+ + F + + R + V +
Sbjct: 11 RLMLAVLIASTLHVLVI----FGVSFDVWRGQKARYQVEVTLVQ-TPGRRPVTADHIAQA 65
Query: 62 VQFKGSSQ---ENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKES---AL 115
Q S+ + S S Q +T A + ++ + +
Sbjct: 66 DQTGSGSEALRDRASGSQSALPQPVAESAQRQTTANTGRERLAAPAVTSTNAQRKIVDRT 125
Query: 116 LRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPS 175
+ + + Q L + +P + L + +++
Sbjct: 126 GQQQNLEDLPEAERELARLSQKLAQLQADLNAQRQQYSNQPRVRRLTAVSARAAVDAAYL 185
Query: 176 QDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRML 235
D + V + V + + + ++M + G + G + G +L
Sbjct: 186 ADWRSRVES-VGNQYYPEASLRYGIYGSLEMLVTVRSDGSLEGIQILQSSG-----YAVL 239
Query: 236 RENARKAVIKSQAFRLSPS 254
E A + V + + P
Sbjct: 240 DEAAMRIVRLAAPYSPFPD 258
>gi|301167925|emb|CBW27510.1| putative membrane protein [Bacteriovorax marinus SJ]
Length = 266
Score = 68.8 bits (166), Expect = 7e-10, Method: Composition-based stats.
Identities = 35/249 (14%), Positives = 75/249 (30%), Gaps = 20/249 (8%)
Query: 10 SMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQ 69
S H+ + +L+F F + I ++ + ++ +V +
Sbjct: 18 SFFFHIT-IAVLFFLFGKLVHDKIQSTRDYNMKLVQAS---------VKVDMVAMPKFTL 67
Query: 70 ENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRM---PVSPYDKQ 126
+ L + + A + K +++ K
Sbjct: 68 KELKAMQPPAKGEVVREKPSAKPAEVINKDDTVFEKKVAKPNFLDMMKDLSNKKVEVKKA 127
Query: 127 KISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRV 186
K + D GI K + + K LS +S ++ Q + + +V
Sbjct: 128 KPTPKKKGADDGIGIDSNTLKKLVAEGNKISKGVALSGTGRSDQELTEFQLYASTLSAKV 187
Query: 187 IANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKS 246
W +P K L+ ++ L G +L + G E + A A+ ++
Sbjct: 188 KQFWKLPGYLID-KNLKCRIRIYLKSDGSLLRSEIFESSGEEE-----FDKRAMAAIKQA 241
Query: 247 QAFR-LSPS 254
F + P+
Sbjct: 242 SPFSAVPPA 250
>gi|119944497|ref|YP_942177.1| TolA family protein [Psychromonas ingrahamii 37]
gi|119863101|gb|ABM02578.1| TolA family protein [Psychromonas ingrahamii 37]
Length = 304
Score = 68.8 bits (166), Expect = 8e-10, Method: Composition-based stats.
Identities = 38/305 (12%), Positives = 98/305 (32%), Gaps = 51/305 (16%)
Query: 6 GLAISMILHVMFLLLLYFNFNV--QLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQ 63
++++H++ LL N N + P + +++ + + + ++ E+ +
Sbjct: 9 AFIGALLMHIIVGTLLLLNVNFSNPKIKPKNEVPIINATVVDQKLLDNLAQRQSEKKQAE 68
Query: 64 FKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPY 123
K QE + ++ +R + + K A + + K+ + + A +++A ++
Sbjct: 69 RKKVEQEKQRIEQEKKKAAERVAAEKKQAAEKLKAKQDAEKAKKVAAEKAAAEKVAAEKV 128
Query: 124 DKQKISKATNKEQDLQG-------------------------------------ISFAEK 146
+K++ +
Sbjct: 129 AAEKVAAEKVAAEKAAAEKAAAEKAAAEKAAAEKAAAEKAAAEKAAAAAKVKAEQEKERL 188
Query: 147 KSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKM 206
+ + + E +SSR+ A++++++ NW I K +
Sbjct: 189 RRAELDKQMDAQFEDTFSNAQSSRQLSEIARYTALIQDKIGRNWQIEPSMKGK---SCTL 245
Query: 207 HFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLS--PSTYKSWRNITL 264
+L G V+ L E+A++A +K+ + P +R+ L
Sbjct: 246 SIRLAADGLVISAKR-------SSGDIQLCESAKRAALKANTLPIPKDPDISAKFRDFDL 298
Query: 265 FFVPS 269
P
Sbjct: 299 NLKPE 303
>gi|77919983|ref|YP_357798.1| TonB-dependent receptor [Pelobacter carbinolicus DSM 2380]
gi|77546066|gb|ABA89628.1| outer membrane transport energization protein TonB [Pelobacter
carbinolicus DSM 2380]
Length = 245
Score = 68.8 bits (166), Expect = 8e-10, Method: Composition-based stats.
Identities = 38/271 (14%), Positives = 70/271 (25%), Gaps = 43/271 (15%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPV 61
R S+ +H+ +L L + P + VD
Sbjct: 5 RTWLAFGASLAIHLAVVLALGMGL----MQPHRLVNRVEVDL------------------ 42
Query: 62 VQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVS 121
S VR S + + A + + +S+ A S+
Sbjct: 43 EGAAAPSVPAGVRAPSPVAGPEMPQSSSVPSAAAVPAQLAVASQSFNAPTPSSFDPDGEL 102
Query: 122 PYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAI 181
++ + S + + + S +
Sbjct: 103 QVPVSGGL----PGPTSVALTASGGGSGGMGAGSGPGTQGAGQGRRGSGSASALAGYLNA 158
Query: 182 VRNRVIANWNIPSDFK-RFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENAR 240
+R RV A P + R ++ + F+L G + G V G R L + A
Sbjct: 159 IRARVDAAKRYPQMAQQRRQEGVATVTFRLTPDGRLAGTPTVTRSSG----YRQLDKAAL 214
Query: 241 KAVIKSQAFRLSPSTYKSWRNITLFFVPSKM 271
+AV + + P P +M
Sbjct: 215 RAVNRGAPYPAFP------------LDPRQM 233
>gi|254450211|ref|ZP_05063648.1| possible TolA protein [Octadecabacter antarcticus 238]
gi|198264617|gb|EDY88887.1| possible TolA protein [Octadecabacter antarcticus 238]
Length = 355
Score = 68.8 bits (166), Expect = 8e-10, Method: Composition-based stats.
Identities = 23/229 (10%), Positives = 54/229 (23%), Gaps = 5/229 (2%)
Query: 48 DYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGE 107
+ + + + + + + Q + T + E
Sbjct: 124 PRATPRVAPEIVAPPEPDATVAPEVTQAATEQVDAPVEDVVEPAEETTAPEAAADQIVTE 183
Query: 108 QALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEK 167
A Q+ + + + V
Sbjct: 184 AEEPSFAPEISSRPQTRPQRAAAPVLETPTEDAVDPVAAALAAAGAVETPTPTSTPTPTP 243
Query: 168 SSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVL--GKINVDVV 225
S+ ++ WN + + + M F + G + +
Sbjct: 244 GLSGGQLSEGDKTGFLRQIGNCWNTGTLSTGAQNTIIDMVFDMTPDGRPVAASVRLDNFS 303
Query: 226 GGTELVRRMLRENARKAVIKSQ---AFRLSPSTYKSWRNITLFFVPSKM 271
GG + AR+A+++ + L Y W+ + L P+ M
Sbjct: 304 GGNAADADAALQTARRALLRCSGDTGYDLPRDQYAQWQRVILTVDPTAM 352
>gi|148262287|ref|YP_001228993.1| TonB family protein [Geobacter uraniireducens Rf4]
gi|146395787|gb|ABQ24420.1| Cell division and transport-associated protein TolA [Geobacter
uraniireducens Rf4]
Length = 245
Score = 68.8 bits (166), Expect = 8e-10, Method: Composition-based stats.
Identities = 28/264 (10%), Positives = 62/264 (23%), Gaps = 26/264 (9%)
Query: 7 LAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKG 66
S +LH L+ N+ V + VD + G
Sbjct: 2 FICSFLLHAALFFLVM-QLNILSGVQADNPPVYYVDVVNLPVASPRSGSP--------AG 52
Query: 67 SSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQ 126
++ + T +S+++ K
Sbjct: 53 NATGATAPVAPPTPKPQAEEMKLPAKPTPTSRPKSTTATPASGAKPDHQESARDFEERLA 112
Query: 127 KISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRV 186
++ + + KK + + K S + +
Sbjct: 113 RLERENESRHAAAALDALRKKKTGSDKGQAGMPGATGKEAGSDYSSYIQSRLKDAFKTTI 172
Query: 187 IANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKS 246
+ K V++ +N+ G + + G R+ + +A+ K+
Sbjct: 173 ---------AFQSKTPEVRVRLTINRTGRIARQRIEYSSGD-----RLFEDAVLQAIAKA 218
Query: 247 Q-AFRLSPSTYKSWRNITLFFVPS 269
+ +F P F P
Sbjct: 219 EKSFTPPPGGQDF--EYGFVFKPQ 240
>gi|213971483|ref|ZP_03399595.1| tonB domain protein [Pseudomonas syringae pv. tomato T1]
gi|302062230|ref|ZP_07253771.1| tonB domain protein [Pseudomonas syringae pv. tomato K40]
gi|213923765|gb|EEB57348.1| tonB domain protein [Pseudomonas syringae pv. tomato T1]
Length = 297
Score = 68.8 bits (166), Expect = 8e-10, Method: Composition-based stats.
Identities = 30/261 (11%), Positives = 78/261 (29%), Gaps = 26/261 (9%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPV 61
RL + I+ ++H+ +L + F + + P + L + + K
Sbjct: 20 RLGFTIMIAALIHLAVILGVGFTY----VKPEQISQTLEITLATFKSEEKPKQADFLAQD 75
Query: 62 VQFKGSSQENLVR----------DFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALK 111
Q + + D V + S + +T ++++ Q
Sbjct: 76 DQQGSGTLDKAETLKTTELAPYQDTKVNKVTPPPSSKPVVKQEAPKTAVATTAASPQKTV 135
Query: 112 ESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRK 171
P +++ ++ + RP L + +
Sbjct: 136 AKRDEVKPEPTTKAAPTFDSSDLSNEIASLEAELSTEQQLYAKRPKIHRLNAASTMRDKG 195
Query: 172 RIPSQDAIAIVRNRVIANWNIPSDFKRFKK---LRVKMHFQLNQKGFVLGKINVDVVGGT 228
R +V N+ + +K +++ +N+ G + + ++ G
Sbjct: 196 AW----YKDDWRKKVERVGNLNYPEEARRKQIYGNLRLLVSINRDGSLYEVLVLESSG-- 249
Query: 229 ELVRRMLRENARKAVIKSQAF 249
+ +L + A++ V + F
Sbjct: 250 ---QPLLDQAAQRIVRLAAPF 267
>gi|49474672|ref|YP_032714.1| tolA protein [Bartonella quintana str. Toulouse]
gi|49240176|emb|CAF26642.1| tolA protein [Bartonella quintana str. Toulouse]
Length = 392
Score = 68.8 bits (166), Expect = 9e-10, Method: Composition-based stats.
Identities = 31/254 (12%), Positives = 73/254 (28%), Gaps = 10/254 (3%)
Query: 25 FNVQLLVPISRREMLSVDNIYNEDYHSSK--YKKIEEPVVQFKGSSQENLVRDFSVQENG 82
+ R ++ + +K+ Q ++E + + +
Sbjct: 133 LETKAEKVAEVRPEVAQKIVPATPEEVHPEVTQKVVPEAPQEMRKNEEVTLPQTAPEAQK 192
Query: 83 DRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQD----- 137
S + K + + K++ + T + +
Sbjct: 193 APVEQVQIHQQAPQRALPKRSPFPQLKPKPAQKSVTQNAQAAKKQNQQMTRQTIEDILAM 252
Query: 138 LQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWN-IPSDF 196
+ + R + E L + + +Q I IV + +
Sbjct: 253 EEKNLLNRTHTQGGGAKRSSEPEALGGRKNINDITKMAQTLINIVGGCIQKKLKLVALGG 312
Query: 197 KRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFR-LSPST 255
+ V++ F L+++G +LG +D + G E + ++ AV Q ++ L
Sbjct: 313 DFKNRPVVRLRFYLDREGMILGNPIIDPLSGEENQQAIMIRQVYAAVFSCQPYKDLPRDQ 372
Query: 256 YKSW-RNITLFFVP 268
Y W + P
Sbjct: 373 YDLWGQGFDFNVDP 386
Score = 49.5 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 23/200 (11%), Positives = 64/200 (32%), Gaps = 15/200 (7%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
++ GLA+S+ +H++FL L +F + +P + E + + + SS+ + PV
Sbjct: 9 MKRGLALSLAVHIIFLSLGVIHFTSPVSLP-QQLETIPITLAPLTEELSSQQGALNAPVR 67
Query: 63 QFKGSSQENLVRDF--------------SVQENGDRFSDQTKTHATENETKRSSSSKGEQ 108
++ + + ++ + E K S
Sbjct: 68 AIPAVKSTTKPQEKQEAHHFGEGQVDSLAPFKPKEKPRRVETMSSPSGEEKVSEKPSPPF 127
Query: 109 ALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKS 168
+E + + ++++ + +K + K E ++ + +
Sbjct: 128 KAQELLETKAEKVAEVRPEVAQKIVPATPEEVHPEVTQKVVPEAPQEMRKNEEVTLPQTA 187
Query: 169 SRKRIPSQDAIAIVRNRVIA 188
+ + + I +
Sbjct: 188 PEAQKAPVEQVQIHQQAPQR 207
>gi|326388396|ref|ZP_08209992.1| hypothetical protein Y88_3279 [Novosphingobium nitrogenifigens DSM
19370]
gi|326207128|gb|EGD57949.1| hypothetical protein Y88_3279 [Novosphingobium nitrogenifigens DSM
19370]
Length = 358
Score = 68.4 bits (165), Expect = 9e-10, Method: Composition-based stats.
Identities = 23/105 (21%), Positives = 42/105 (40%), Gaps = 6/105 (5%)
Query: 168 SSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGG 227
+ + ++ V ++ +W+ P KL + + LN G + G+ V G
Sbjct: 250 DKLGAVSTASLVSAVSRQIKPHWSAPDGV-DTDKLVTVLAWTLNPDGTLAGRPTVVSQSG 308
Query: 228 TELVRRM----LRENARKAVIKSQAFRLSPSTYKSWRNIT-LFFV 267
R E A +AV + F+L P Y +WR+++ F
Sbjct: 309 ITDANRAQAQRHAELAIRAVQLAAPFKLPPQAYATWRHVSAFRFD 353
Score = 37.2 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 14/67 (20%), Positives = 28/67 (41%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
GL I+++ HV + L + + + P R +S+ + ++ S K P V +
Sbjct: 16 GLGIAIVAHVALIAGLTLSPPGRTVQPPPERVTVSLADTIADESVSPKPNAQPAPDVAPQ 75
Query: 66 GSSQENL 72
E+
Sbjct: 76 LGEPEHA 82
>gi|319406261|emb|CBI79898.1| TolA protein [Bartonella sp. AR 15-3]
Length = 377
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 35/259 (13%), Positives = 69/259 (26%), Gaps = 15/259 (5%)
Query: 25 FNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDR 84
F+ E + + K K E K S + V ++++
Sbjct: 113 FSFGQQEASDIPESSPKTETESLLHREPKLTKNEMKTSPPKSESTDQTVSPTALEQIKPE 172
Query: 85 FSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKE--QDLQGIS 142
Q E + P K + T K + Q I
Sbjct: 173 DPLQKTLEELTQEKPNELTPTVMLPDNIPFPSFKPKEKPIKPSNFEKTQKSPSKGKQTIE 232
Query: 143 FAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNR----------VIANWNI 192
++ R + +K ++ + + +
Sbjct: 233 DILAMEETHLINRARTQGGGAKRSHKPEALGARKNIGDSAKKAQTLVNIVGTCIQQKLKL 292
Query: 193 PS-DFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAF-R 250
+ + V++ F+LN G V+G+ +D + G E ++ + AV Q +
Sbjct: 293 VAIGGNLSNRPVVRLQFRLNNNGNVIGEPKIDPLKGEESQLTIMTQQVYAAVFSCQPYEN 352
Query: 251 LSPSTYKSW-RNITLFFVP 268
L Y W + P
Sbjct: 353 LPRDQYNLWGQGFDFNVDP 371
Score = 45.7 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 18/176 (10%), Positives = 51/176 (28%), Gaps = 2/176 (1%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPV 61
R++ LA+S LH + +F E+ + + + + + P
Sbjct: 8 RMKKSLALSFALHFILFSWGIIHFTPSSSFMQQPLEIAPITLSSLDKELAFQEGSLNAPP 67
Query: 62 VQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVS 121
++ + ++ + + +T E + + ++ A S
Sbjct: 68 LEDSAPKRTTQPQEKEDARHFGEGTMDLQTPFQPKEKLQHMDATPFSFGQQEASDIPESS 127
Query: 122 PYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQD 177
P K + ++E L + L +++ + ++
Sbjct: 128 P--KTETESLLHREPKLTKNEMKTSPPKSESTDQTVSPTALEQIKPEDPLQKTLEE 181
>gi|119356689|ref|YP_911333.1| Fis family transcriptional regulator [Chlorobium phaeobacteroides
DSM 266]
gi|119354038|gb|ABL64909.1| Cell division and transport-associated protein TolA [Chlorobium
phaeobacteroides DSM 266]
Length = 298
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 34/283 (12%), Positives = 78/283 (27%), Gaps = 26/283 (9%)
Query: 7 LAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYN--EDYHSSKYKKIEEPVVQF 64
L+ + +H++ L L+F +V ++++V + ++ + V
Sbjct: 18 LSAAAAMHILLLSGLFF-LDVFNQAKQRVPKIINVSLVSLPGTGASAAPRAEGAGRAVTV 76
Query: 65 KGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYD 124
+ + E ++ + K S + + A +
Sbjct: 77 EKKTVETPQAASRPEQQVKPKESAAIPAPVKKPEKEISEAPAKPKALPVANRKPAQLDKT 136
Query: 125 KQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPS--------- 175
++ N++ Q + S T + + + + R+ S
Sbjct: 137 LDRLKLEVNRKAATQPSRADQLGSALTKLQDKVRSQGAKGAGSNDREVASSAGGAGGVGK 196
Query: 176 --------QDAIAIVRNRVIANWNIPSDF-KRFKKLRVKMHFQLNQKGFVLGKINVDVVG 226
+ + + NW S K + V + + G +
Sbjct: 197 GASGGGVSDPYKVSIASIIQNNWEFSSQLTKNGYGMEVYVSINILPDGTINEIRF----- 251
Query: 227 GTELVRRMLRENARKAVIKSQAFRLSPSTYKSWRNITLFFVPS 269
L + +KA+ KS P Y + I F P
Sbjct: 252 DKRAASEYLNNSVKKALEKSSPLPDLPKKYGASLRIGFVFTPE 294
>gi|330963799|gb|EGH64059.1| tonB domain-containing protein [Pseudomonas syringae pv. actinidiae
str. M302091]
Length = 297
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 29/261 (11%), Positives = 80/261 (30%), Gaps = 26/261 (9%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP- 60
RL + I+ ++H+ +L + F + + P + L + + K
Sbjct: 20 RLGFTMMIAALIHLAVILGVGFTY----VKPEQISQTLEITLATFKSEEKPKQADFLAQD 75
Query: 61 ---------VVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALK 111
+ +++ +D V + S + +T ++++ Q
Sbjct: 76 DQQGSGTLDKAETLKTTELAPYQDTKVNKVTPPPSSKPVVKQEAPKTAVATTAASPQKTV 135
Query: 112 ESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRK 171
P +++ ++ + RP L + +
Sbjct: 136 AKRDEVKPEPTTKAAPTFDSSDLSNEIASLEAELSTEQQLYAKRPKIHRLNAASTMRDKG 195
Query: 172 RIPSQDAIAIVRNRVIANWNIPSDFKRFKK---LRVKMHFQLNQKGFVLGKINVDVVGGT 228
R +V N+ + +K +++ +N+ G + + ++ G
Sbjct: 196 AW----YKDDWRKKVERVGNLNYPEEARRKQIYGNLRLLVSINRDGSLYEVLVLESSG-- 249
Query: 229 ELVRRMLRENARKAVIKSQAF 249
+ +L + A++ V + F
Sbjct: 250 ---QPLLDQAAQRIVRLAAPF 267
>gi|330873934|gb|EGH08083.1| tonB domain-containing protein [Pseudomonas syringae pv.
morsprunorum str. M302280PT]
Length = 300
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 29/261 (11%), Positives = 80/261 (30%), Gaps = 26/261 (9%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP- 60
RL + I+ ++H+ +L + F + + P + L + + K
Sbjct: 23 RLGFTMMIAALIHLAVILGVGFTY----VKPEQISQTLEITLATFKSEEKPKQADFLAQD 78
Query: 61 ---------VVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALK 111
+ +++ +D V + S + +T ++++ Q
Sbjct: 79 DQQGSGTLDKAETLKTTELAPYQDTKVNKVTPPPSSKPVVKQEAPKTAVATTAASPQKTV 138
Query: 112 ESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRK 171
P +++ ++ + RP L + +
Sbjct: 139 AKRDEVKPEPTTKAAPTFDSSDLSNEIASLEAELSTEQQLYAKRPKIHRLNAASTMRDKG 198
Query: 172 RIPSQDAIAIVRNRVIANWNIPSDFKRFKK---LRVKMHFQLNQKGFVLGKINVDVVGGT 228
R +V N+ + +K +++ +N+ G + + ++ G
Sbjct: 199 AW----YKDDWRKKVERVGNLNYPEEARRKQIYGNLRLLVSINRDGSLYEVLVLESSG-- 252
Query: 229 ELVRRMLRENARKAVIKSQAF 249
+ +L + A++ V + F
Sbjct: 253 ---QPLLDQAAQRIVRLAAPF 270
>gi|118581724|ref|YP_902974.1| TonB family protein [Pelobacter propionicus DSM 2379]
gi|118504434|gb|ABL00917.1| Cell division and transport-associated protein TolA [Pelobacter
propionicus DSM 2379]
Length = 258
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 26/265 (9%), Positives = 70/265 (26%), Gaps = 29/265 (10%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
L +S+I H + + L + + + P+ +E VD + ++ +
Sbjct: 15 SLCLSVIFHALCGVSLVW-WQSLVPPPLVLQETYYVDVVNLPVASPRSGSPTQQGDMAEA 73
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
+ + +D K R+ +
Sbjct: 74 APPLPQAEEKAMPLPSPPKPADSGKQSKAPKTAPRNLPDVDSDS---------------- 117
Query: 126 QKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNR 185
+ + + S + +++++ + + + D +A +++R
Sbjct: 118 ---FAKKMAKLEGRVASGQHESAVESLRRKVASGGSGRSGMPGGKGQEAGSDYVAYIQSR 174
Query: 186 VIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIK 245
+ + + V + L+ G + K G + A+ +
Sbjct: 175 LKDAFRETIS-YTSRAPEVVVRISLDSSGRLARKKIERSSGD-----LAFERSVIAAIDR 228
Query: 246 SQ-AFRLSPSTYKSWRNITLFFVPS 269
+ F P F P
Sbjct: 229 ASEKFPAPPDR--RGFEGVFVFKPQ 251
>gi|300309741|ref|YP_003773833.1| periplasmic protein TonB, links inner and outer membranes
[Herbaspirillum seropedicae SmR1]
gi|300072526|gb|ADJ61925.1| periplasmic protein TonB, links inner and outer membranes, protein
[Herbaspirillum seropedicae SmR1]
Length = 307
Score = 68.0 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 34/258 (13%), Positives = 77/258 (29%), Gaps = 12/258 (4%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
L L +S+++H + L + + + L P L V + + +
Sbjct: 24 LSVALGVSLLVHGLMLAVHFAAPDAFRLKPSD--PDLEVILVNAKHDKKPVNAQALAQAN 81
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
G + E+ + + S + A + + A + + + +
Sbjct: 82 LDGGGNAEDGRAKSPLPDMQRVDSGDSVKAAQRKVVELEQQQRRMMAQLKQSQQHVASAE 141
Query: 123 YDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIP-SQDAIAI 181
KQ + N ++ + + + K + + R
Sbjct: 142 QQKQTEAPQLNARDMIETARAMARMEAEVARDIEQYNKRPKKTQITPSTREVGYAQYYKT 201
Query: 182 VRNRVIANWNIPSDFKRFKKL--RVKMHFQLNQKGFV---LGKINVDVVGGTELVRRMLR 236
+++++ + K KKL + + + Q G + G + V G L
Sbjct: 202 LQDKIEKVGTLNFPTKDGKKLYGELLIVIPVFQDGSIYERDGGVVVKSSSGNA----ALD 257
Query: 237 ENARKAVIKSQAFRLSPS 254
+ A V +S F P
Sbjct: 258 QAAVAIVRRSAPFGRFPD 275
>gi|302189827|ref|ZP_07266500.1| TonB, C-terminal [Pseudomonas syringae pv. syringae 642]
Length = 297
Score = 68.0 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 29/261 (11%), Positives = 78/261 (29%), Gaps = 26/261 (9%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPV 61
RL + I+ ++H+ +L + F + + P + L + + K
Sbjct: 20 RLGFTMMIAALIHLAVILGVGFTY----VKPEHISQTLEITLATFKSEEKPKQADFLAQD 75
Query: 62 VQFKGSSQENLVR----------DFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALK 111
Q + + D V + + + +T ++++ +Q
Sbjct: 76 DQQGSGTLDKAETLKTTELAPYQDTKVNKVTPPPASKPVVKQEAPKTAVATTAPSQQKTV 135
Query: 112 ESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRK 171
P ++ ++ + RP L + +
Sbjct: 136 AKRDEVKPEPTTKAAPTFDSSELSNEIASLEAELSTEQQLYAKRPKIHRLNAASTMRDKG 195
Query: 172 RIPSQDAIAIVRNRVIANWNIPSDFKRFKK---LRVKMHFQLNQKGFVLGKINVDVVGGT 228
R +V N+ + +K +++ +N+ G + + ++ G
Sbjct: 196 AW----YKDDWRKKVERVGNLNYPEEARRKQIYGNLRLLVSINRDGSLYEVLVLESSG-- 249
Query: 229 ELVRRMLRENARKAVIKSQAF 249
+ +L + A++ V + F
Sbjct: 250 ---QPLLDQAAQRIVRLAAPF 267
>gi|71734799|ref|YP_272780.1| TonB domain-containing protein [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|71555352|gb|AAZ34563.1| tonB domain protein [Pseudomonas syringae pv. phaseolicola 1448A]
Length = 297
Score = 68.0 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 29/261 (11%), Positives = 77/261 (29%), Gaps = 26/261 (9%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPV 61
RL + I+ ++H+ +L + F + + P + L + + K
Sbjct: 20 RLGFTMMIAALIHLAVILGVGFTY----VKPEQISQTLEITLATFKSEEKPKQADFLAQD 75
Query: 62 VQFKGSSQENLVR----------DFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALK 111
Q + + D V + + + +T ++++ +Q
Sbjct: 76 DQQGSGTLDKAETLKTTELAPYQDTKVNKVTPPPASKPVVKQEAPKTAVATTAPSQQKTV 135
Query: 112 ESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRK 171
P + ++ + RP L + +
Sbjct: 136 AKRDEVKPEPTTKAAPTFDSLELSNEIASLEAELSTEQQLYAKRPKIHRLNAASTMRDKG 195
Query: 172 RIPSQDAIAIVRNRVIANWNIPSDFKRFKK---LRVKMHFQLNQKGFVLGKINVDVVGGT 228
R +V N+ + +K +++ +N+ G + + ++ G
Sbjct: 196 AW----YKDDWRKKVERVGNLNYPEEARRKQIYGNLRLLVSINRDGSLYEVLVLESSG-- 249
Query: 229 ELVRRMLRENARKAVIKSQAF 249
+ +L + A++ V + F
Sbjct: 250 ---QPLLDQAAQRIVRLAAPF 267
>gi|66043753|ref|YP_233594.1| TonB, C-terminal [Pseudomonas syringae pv. syringae B728a]
gi|63254460|gb|AAY35556.1| TonB, C-terminal [Pseudomonas syringae pv. syringae B728a]
Length = 300
Score = 68.0 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 29/261 (11%), Positives = 78/261 (29%), Gaps = 26/261 (9%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPV 61
RL + I+ ++H+ +L + F + + P + L + + K
Sbjct: 23 RLGFTMMIAALIHLAVILGVGFTY----VKPEQISQTLEITLATFKSEEKPKQADFLAQD 78
Query: 62 VQFKGSSQENLVR----------DFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALK 111
Q + + D V + + + +T ++++ +Q
Sbjct: 79 DQQGSGTLDKAETLKTTELAPYQDTKVNKVTPPPASKPVVKQEAPKTAVATTAPSQQKTV 138
Query: 112 ESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRK 171
P ++ ++ + RP L + +
Sbjct: 139 AKRDEVKPEPTTKAAPTFDSSELSNEIASLEAELSTEQQLYAKRPKIHRLNAASTMRDKG 198
Query: 172 RIPSQDAIAIVRNRVIANWNIPSDFKRFKK---LRVKMHFQLNQKGFVLGKINVDVVGGT 228
R +V N+ + +K +++ +N+ G + + ++ G
Sbjct: 199 AW----YKDDWRKKVERVGNLNYPEEARRKQIYGNLRLLVSINRDGSLYEVLVLESSG-- 252
Query: 229 ELVRRMLRENARKAVIKSQAF 249
+ +L + A++ V + F
Sbjct: 253 ---QPLLDQAAQRIVRLAAPF 270
>gi|251772668|gb|EES53232.1| TonB family protein [Leptospirillum ferrodiazotrophum]
Length = 269
Score = 68.0 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 38/257 (14%), Positives = 78/257 (30%), Gaps = 21/257 (8%)
Query: 7 LAISMILHVMFLLLLYFNFNVQLLVPISR--REMLSVDNIYNEDYHSSKYKKIEEPVVQF 64
L +S+ LHV+ + L+ P S + +V I P+V
Sbjct: 18 LVLSLFLHVIVVTLVV-----MHRKPTSLGYQTATTVALIPENQLVRPGAPPPPAPMVPP 72
Query: 65 KGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYD 124
+ S + ++ +R + + + + P
Sbjct: 73 VKKVRPAPPPPPPPHPQRRAPSPRVIRKPPVHKPQRRPVPRRIKRPVPAHKVVHPKPVAQ 132
Query: 125 KQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRN 184
K ++ ++ Q+ K + V ++ +
Sbjct: 133 KARVIPVKSQHQEHHKTPPPSK-------AALAPVANPAPVHMDLAGNQFPTYLQHLLIS 185
Query: 185 RVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVI 244
R+ +NW P L V + F L + G + G + G+ R+ + AR A++
Sbjct: 186 RIKSNWAPPPG---SHGLYVTIRFTLLKDGQISGDPVLMTASGS----RVFDDAARYAIL 238
Query: 245 KSQAFRLSPSTYKSWRN 261
+S F P +Y +
Sbjct: 239 RSVPFPPFPPSYGKEKE 255
>gi|304320243|ref|YP_003853886.1| hypothetical protein PB2503_03342 [Parvularcula bermudensis
HTCC2503]
gi|303299145|gb|ADM08744.1| hypothetical protein PB2503_03342 [Parvularcula bermudensis
HTCC2503]
Length = 294
Score = 68.0 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 40/289 (13%), Positives = 77/289 (26%), Gaps = 28/289 (9%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
L++S++LH + L PI + VD + ++ E +
Sbjct: 5 ALSLSLLLHGAVIGGLVVTVPRLADDPIYIPP-VPVDVLSRAEFDDLVSIPAESATEEPA 63
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGE------------------ 107
+ + + + + D T E E + +
Sbjct: 64 EREEPAPLPEPAPEPAPQPEPDPTPEPEPEPEPAPEPEPEPQPAPEPAPEPEPQPEAEPE 123
Query: 108 ---QALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSK 164
D + + L ++ ++ VV + +
Sbjct: 124 PQLPEPDPEPAPPTSAPEPDPVEDLDFDSLSDGLVDLTPDRPRTAPRVVGDTGEGGERDQ 183
Query: 165 VEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDV 224
+ S A ++ V AN I + + V++ LN + I +
Sbjct: 184 PQI-GPGGQLSITEEAALQACVRANRVIDLSARDADQFVVELRIVLNIDQTLAAPIEITN 242
Query: 225 ----VGGTELVRRMLRENARKAVIKSQAFR-LSPSTYKSWRNITLFFVP 268
+ NA AV L P+ Y+ WR I F P
Sbjct: 243 QAAINRSGNPAYQAAARNAVAAVRACLPLDALDPARYQQWRVINFRFRP 291
>gi|26991671|ref|NP_747096.1| TonB family protein [Pseudomonas putida KT2440]
gi|24986770|gb|AAN70560.1|AE016699_1 conserved hypothetical protein [Pseudomonas putida KT2440]
Length = 301
Score = 68.0 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 31/260 (11%), Positives = 79/260 (30%), Gaps = 21/260 (8%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPV 61
RL L ++ ++H+ +L + F + P R + + + + +
Sbjct: 21 RLGFTLFLAALVHLALILGVGFTV----VKPAEIRHTMDITLATFKSEKPPEKADFQAQD 76
Query: 62 VQFKGSSQENLVRDFSVQ-------ENGDRFSDQTKTHATENETKRSSSSKGEQALKESA 114
Q + + + + + S+ A K
Sbjct: 77 NQQGSGTLDKKAVPKTTELAPFQDSKINKITPPPAARPEVVPPPPPKKSAVVTTAPKPHK 136
Query: 115 LLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRP--DKKELLSKVEKSSRKR 172
+ P + K + T Q S + + K+ + ++ +S R
Sbjct: 137 VEPKPKESKAQPKPAAPTPDFDSSQLSSQIASLEAELSNEQQMYAKRPRIHRLNAASTMR 196
Query: 173 IPSQDAIAIVRNRVIANWNIPSDFKRFKK---LRVKMHFQLNQKGFVLGKINVDVVGGTE 229
R +V N+ + ++ ++M +N+ G + + ++ G
Sbjct: 197 DKGAWYKEEWRKKVERVGNLNYPDEARRQQIYGNLRMMVSINRDGSLYEVLVLESSG--- 253
Query: 230 LVRRMLRENARKAVIKSQAF 249
+ +L + A++ V + F
Sbjct: 254 --QPVLDQAAQRIVRLAAPF 271
>gi|289209565|ref|YP_003461631.1| TonB family protein [Thioalkalivibrio sp. K90mix]
gi|288945196|gb|ADC72895.1| TonB family protein [Thioalkalivibrio sp. K90mix]
Length = 310
Score = 68.0 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 28/284 (9%), Positives = 76/284 (26%), Gaps = 25/284 (8%)
Query: 2 RLENGLAISMILHVMFLLLLYFNF-------------NVQLLVPISRREMLSVDNIYNED 48
+L L ++++ H + +L + F E V+ I ED
Sbjct: 18 QLGPMLFLAVVAHALIILGIGFAVDPLDTPSREPLDVTWVTDPDAQEPEPEEVERIATED 77
Query: 49 YHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQ 108
+S + + + + ++ + E + + E + + +
Sbjct: 78 QAASGEGEEVQEALSPEAEAEGIGEPEPEGVEAPLPDAGPLVMEPAQPEPEPEPEAVEAE 137
Query: 109 ALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKS 168
+ + P + + R + ++
Sbjct: 138 TDEAAPTAPEVAEPEPIESPQAEERPSAAALMNRGLDTARAAPAEERREFSTRATRTRYL 197
Query: 169 SRKRIPSQDAIAIVRNRVIA-----NWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKINV 222
S A ++ + N N P + +R + + +LN G ++
Sbjct: 198 DSLAARSAPEAAYLQAWINKVERVGNLNYPDEARRRGLSGTLVLSVRLNPDGELMDIEIA 257
Query: 223 DVVGGTELVRRMLRENARKAVIKSQAFRLSPSTY-KSWRNITLF 265
G +L + A + V + + + + + +
Sbjct: 258 RSSGE-----PVLDQAAMRIVELAAPYAPFTEQMREEYDELVIT 296
>gi|28872150|ref|NP_794769.1| tonB domain-containing protein [Pseudomonas syringae pv. tomato
str. DC3000]
gi|28855404|gb|AAO58464.1| tonB domain protein [Pseudomonas syringae pv. tomato str. DC3000]
Length = 297
Score = 68.0 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 30/261 (11%), Positives = 78/261 (29%), Gaps = 26/261 (9%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPV 61
RL + I+ ++H+ +L + F + + P + L + + K
Sbjct: 20 RLGFTMMIAALIHLAVILGVGFTY----VKPEQISQTLEITLATFKSEEKPKQADFLAQD 75
Query: 62 VQFKGSSQENLVR----------DFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALK 111
Q + + D V + S + +T ++++ Q
Sbjct: 76 DQQGSGTLDKAETLKTTELAPYQDTKVNKVTPPPSSKPVVKQEAPKTAVATTAASPQKTV 135
Query: 112 ESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRK 171
P +++ ++ + RP L + +
Sbjct: 136 AKRDEVKPEPTTKAAPTFDSSDLSNEIASLEAELSTEQQLYAKRPKIHRLNAASTMRDKG 195
Query: 172 RIPSQDAIAIVRNRVIANWNIPSDFKRFKK---LRVKMHFQLNQKGFVLGKINVDVVGGT 228
R +V N+ + +K +++ +N+ G + + ++ G
Sbjct: 196 AW----YKDDWRKKVERVGNLNYPEEARRKQIYGNLRLLVSINRDGSLYEVLVLESSG-- 249
Query: 229 ELVRRMLRENARKAVIKSQAF 249
+ +L + A++ V + F
Sbjct: 250 ---QPLLDQAAQRIVRLAAPF 267
>gi|300690409|ref|YP_003751404.1| tonB-related transmembrane protein [Ralstonia solanacearum PSI07]
gi|299077469|emb|CBJ50094.1| putative tonB-related transmembrane protein [Ralstonia solanacearum
PSI07]
Length = 304
Score = 68.0 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 34/276 (12%), Positives = 74/276 (26%), Gaps = 22/276 (7%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
L L S+ILH++ L + + L V + + + V
Sbjct: 16 LTKALVASLILHILLLFVRVVAPEAFDIKRDD--PGLDVVLVNAKSSTAPAKPTAVAQVN 73
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
G + + ++ + + S +
Sbjct: 74 LNGGGEYDRQRATTPLPAETEQQTGDVIKLTQRRIEFLEEEQRRLLTQSRSPAPLVNART 133
Query: 123 YDKQKISKATN----KEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDA 178
+ + + ++ Q + ID + K+ + + +S +++
Sbjct: 134 VKPGEQPQPSPTNGTDDRTTQDEIARLQAEIDRNLENYAKRPRRNVLTAASARQVDYARY 193
Query: 179 IAIVRNRVIANW--NIPSDFKRFKKLRVKMHFQLNQKG---------FVLGKINVDVVGG 227
VR ++ + N PS R + + +N+ G + G G
Sbjct: 194 YDAVRRKIETHGTANFPSLNGRPLYGELIIVISVNRDGQLGYNQDGYKIEGIEVAKSSGN 253
Query: 228 TELVRRMLRENARKAVIKSQAFRLSPSTYKSWRNIT 263
L A V S F P+ + +I
Sbjct: 254 -----PALDRQAVAIVRSSAPFGAFPAEMRKRVDIQ 284
>gi|331092895|ref|ZP_04586644.2| TonB [Pseudomonas syringae pv. oryzae str. 1_6]
gi|331125379|ref|ZP_04592792.2| TonB [Pseudomonas syringae pv. oryzae str. 1_6]
gi|331021035|gb|EGI01092.1| TonB [Pseudomonas syringae pv. oryzae str. 1_6]
gi|331027201|gb|EGI07256.1| TonB [Pseudomonas syringae pv. oryzae str. 1_6]
Length = 297
Score = 68.0 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 30/257 (11%), Positives = 76/257 (29%), Gaps = 18/257 (7%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPV 61
RL + I+ ++H+ +L + F + + P + L + + K
Sbjct: 20 RLGFTMMIAALIHLAVILGVGFTY----VKPEHISQTLEITLATFKSEEKPKQADFLAQD 75
Query: 62 VQFKGS---SQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRM 118
Q E L + + T A++ ++ + S +
Sbjct: 76 DQQGSGTLDKAETLKTTELAPYQDTKVNKVTPPPASKPVVRQEAPKTAVATTAPSQQKTV 135
Query: 119 PVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQD- 177
K + + D +S + K+ + +
Sbjct: 136 AKREEVKPEPTAKAAPTFDSAELSNEIASLEAELSTEQQAYAKRPKIHRLNAASTMRDKG 195
Query: 178 --AIAIVRNRVIANWNIPSDFKRFKK---LRVKMHFQLNQKGFVLGKINVDVVGGTELVR 232
R +V N+ + +K +++ +N+ G + + ++ G +
Sbjct: 196 AWYKDDWRKKVERVGNLNYPEEARRKQIYGNLRLLVSINRDGSLYEVLVLESSG-----Q 250
Query: 233 RMLRENARKAVIKSQAF 249
+L + A++ V + F
Sbjct: 251 PLLDQAAQRIVRLAAPF 267
>gi|253988728|ref|YP_003040084.1| energy transducer TonB [Photorhabdus asymbiotica subsp. asymbiotica
ATCC 43949]
gi|211637947|emb|CAR66575.1| similarities with energy transducer tonb. putative secreted protein
[Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949]
gi|253780178|emb|CAQ83339.1| similarities with energy transducer tonb. putative secreted protein
[Photorhabdus asymbiotica]
Length = 270
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 34/269 (12%), Positives = 88/269 (32%), Gaps = 8/269 (2%)
Query: 2 RLENGLAISMILHVMFLLLLYFNF--NVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEE 59
RL GL S++LH + + + ++ + ++S+ ++ ++ E
Sbjct: 5 RLCIGLVASLLLHAVIAVFMAWHLLHDDSANNQSVNSPIISMSIEMVAAAAPAEQEQAVE 64
Query: 60 PVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMP 119
P E +V + ++ + + K + + + + +
Sbjct: 65 PEPIPPPRLPEVVVAESPLEAKIALNKPVDRPRKRQPLEKHTDTKPRNKPQLQKKPVEDR 124
Query: 120 VSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAI 179
+++ A + + Q ++ D V + ++ + Q
Sbjct: 125 QPKLAERESKSAIEQNRTAQTAGHSQAAGKDAVDSQAGARQATTSQPMIGLGSDDLQSYQ 184
Query: 180 AIVRNRVIANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLREN 238
+ +R + + P K+ K + V++ F L G + V G E L
Sbjct: 185 SALRREIEKHKRYPRRAKKMKQQGTVQVRFSLLDSGDLTNPQLVQSSGADE-----LDRA 239
Query: 239 ARKAVIKSQAFRLSPSTYKSWRNITLFFV 267
A A+ ++++ + P + + F
Sbjct: 240 ALAAIQQARSVGVKPPGLPRDLTLAIEFN 268
>gi|294626824|ref|ZP_06705416.1| TonB protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB
11122]
gi|292598838|gb|EFF42983.1| TonB protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB
11122]
Length = 291
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 39/259 (15%), Positives = 79/259 (30%), Gaps = 17/259 (6%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP- 60
RL L IS++LH +L + F + + + + S + + + +
Sbjct: 16 RLMMTLVISLLLHGGLILGVGFAVSEDAPLVPTLDVIFSQTSTPLTPKQADFLAQANQQG 75
Query: 61 -----VVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESAL 115
Q SQ +V + +T+ +S +GEQA+
Sbjct: 76 GGDHDTAQRPRDSQPGVVPQDRTGLAPQAQRATSVNAPEPTQTRLVTSRRGEQAVPTPQP 135
Query: 116 LRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPS 175
+ + AE + ++ +S +
Sbjct: 136 NTQTDPLTPAE---AQRIQRDAEMARLAAEVHLRSEQYAKRPNRKFVSASTREYAYANYL 192
Query: 176 QDAIAIVRNRVIANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRM 234
+ + R + N N P D +R + +V + + + G V + G +
Sbjct: 193 RAWVD--RAERVGNLNYPDDARRRRLGGKVVISVGVRRDGSVESSRVLVSSG-----VPL 245
Query: 235 LRENARKAVIKSQAFRLSP 253
L + A + V +Q F P
Sbjct: 246 LDDAALRVVQLAQPFPPLP 264
>gi|330899359|gb|EGH30778.1| TonB [Pseudomonas syringae pv. japonica str. M301072PT]
Length = 300
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 29/261 (11%), Positives = 78/261 (29%), Gaps = 26/261 (9%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPV 61
RL + I+ ++H+ +L + F + + P + L + + K
Sbjct: 23 RLGFTMMIAALIHLAVILGVGFTY----VKPEQISQTLEITLASFKSEEKPKQADFLAQD 78
Query: 62 VQFKGSSQENLVR----------DFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALK 111
Q + + D V + + + +T ++++ +Q
Sbjct: 79 DQQGSGTLDKAETLKTTELAPYQDTKVNKVTPPPASKPVVKQEAPKTAVATTAPSQQKTV 138
Query: 112 ESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRK 171
P ++ ++ + RP L + +
Sbjct: 139 AKRDEVKPEPTTKAAPTFDSSELSNEIASLEAELSTEQQLYAKRPKIHRLNAASTMRDKG 198
Query: 172 RIPSQDAIAIVRNRVIANWNIPSDFKRFKK---LRVKMHFQLNQKGFVLGKINVDVVGGT 228
R +V N+ + +K +++ +N+ G + + ++ G
Sbjct: 199 AW----YKDDWRKKVERVGNLNYPEEARRKQIYGNLRLLVSINRDGSLYEVLVLESSG-- 252
Query: 229 ELVRRMLRENARKAVIKSQAF 249
+ +L + A++ V + F
Sbjct: 253 ---QPLLDQAAQRIVRLAAPF 270
>gi|257483599|ref|ZP_05637640.1| TonB domain-containing protein [Pseudomonas syringae pv. tabaci
ATCC 11528]
gi|320321974|gb|EFW78070.1| TonB domain-containing protein [Pseudomonas syringae pv. glycinea
str. B076]
gi|320330921|gb|EFW86895.1| TonB domain-containing protein [Pseudomonas syringae pv. glycinea
str. race 4]
gi|330872146|gb|EGH06295.1| TonB domain-containing protein [Pseudomonas syringae pv. glycinea
str. race 4]
gi|330886264|gb|EGH20165.1| TonB domain-containing protein [Pseudomonas syringae pv. mori str.
301020]
gi|330984648|gb|EGH82751.1| TonB domain-containing protein [Pseudomonas syringae pv. lachrymans
str. M301315]
gi|331009674|gb|EGH89730.1| TonB domain-containing protein [Pseudomonas syringae pv. tabaci
ATCC 11528]
Length = 297
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/261 (10%), Positives = 80/261 (30%), Gaps = 26/261 (9%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP- 60
RL + I+ ++H+ +L + F + + P + L + + K
Sbjct: 20 RLGFTMMIAALIHLAVILGVGFTY----VKPEQISQTLEITLATFKSEEKPKQADFLAQD 75
Query: 61 ---------VVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALK 111
+ +++ +D V + + + +T ++++ +Q
Sbjct: 76 DQQGSGTLDKAETLKTTELAPYQDTKVNKVTPPPASKPVVKQEAPKTAVATTAPSQQKTV 135
Query: 112 ESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRK 171
P ++ ++ + RP L + +
Sbjct: 136 AKRDEVKPEPTTKAAPTFDSSELSNEIASLEAELSTEQQLYAKRPKIHRLNAASTMRDKG 195
Query: 172 RIPSQDAIAIVRNRVIANWNIPSDFKRFKK---LRVKMHFQLNQKGFVLGKINVDVVGGT 228
R +V N+ + +K +++ +N+ G + + ++ G
Sbjct: 196 AW----YKDDWRKKVERVGNLNYPEEARRKQIYGNLRLLVSINRDGSLYEVLVLESSG-- 249
Query: 229 ELVRRMLRENARKAVIKSQAF 249
+ +L + A++ V + F
Sbjct: 250 ---QPLLDQAAQRIVRLAAPF 267
>gi|294667029|ref|ZP_06732256.1| TonB protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB
10535]
gi|292603186|gb|EFF46610.1| TonB protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB
10535]
Length = 291
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 39/259 (15%), Positives = 79/259 (30%), Gaps = 17/259 (6%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP- 60
RL L IS++LH +L + F + + + + S + + + +
Sbjct: 16 RLMMTLVISLLLHGGLILGVGFAVSEDAPLVPTLDVIFSQTSTPLTPKQADFLAQANQQG 75
Query: 61 -----VVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESAL 115
Q SQ +V + +T+ +S +GEQA+
Sbjct: 76 GGDHDTAQRPRDSQPGVVPQDRTGLAPQAQRATSVNAPEPTQTRVVTSRRGEQAVPTPQP 135
Query: 116 LRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPS 175
+ + AE + ++ +S +
Sbjct: 136 NTQTDPLTPAE---AQRIQRDAEMARLAAEVHLRSEQYAKRPNRKFVSASTREYAYANYL 192
Query: 176 QDAIAIVRNRVIANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRM 234
+ + R + N N P D +R + +V + + + G V + G +
Sbjct: 193 RAWVD--RAERVGNLNYPDDARRRRLGGKVVISVGVRRDGSVESSRVLVSSG-----VPL 245
Query: 235 LRENARKAVIKSQAFRLSP 253
L + A + V +Q F P
Sbjct: 246 LDDAALRVVQLAQPFPPLP 264
>gi|167036033|ref|YP_001671264.1| TonB family protein [Pseudomonas putida GB-1]
gi|166862521|gb|ABZ00929.1| TonB family protein [Pseudomonas putida GB-1]
Length = 301
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/260 (11%), Positives = 84/260 (32%), Gaps = 21/260 (8%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPV 61
RL L ++ ++H+ +L + F + P R + + + + + +
Sbjct: 21 RLGFTLFLAALVHLALILGVGFTV----VKPAEIRHTMDITLATFKSEKAPEKADFQAQD 76
Query: 62 VQFKGSSQENLVRDFSVQENG--DRFSDQTKTHATENETKRSSSSKGEQALKESALLRMP 119
Q + + + + D ++ + + A+ +A
Sbjct: 77 NQQGSGTLDKKAVPTTTELAPFQDSKINKITPPPAARPEVVPPPTPQKSAVVTTAPKPQK 136
Query: 120 VSPYDKQKISKATNK-------EQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKR 172
V P K+ ++ L + + + K+ + ++ +S R
Sbjct: 137 VEPKPKESKAQPKPAAPAPDFDSSQLSSQIASLEAELSNEQQMYAKRPRIHRLNAASTMR 196
Query: 173 IPSQDAIAIVRNRVIANWNIPSDFKRFKK---LRVKMHFQLNQKGFVLGKINVDVVGGTE 229
R +V N+ + ++ ++M +N+ G + + ++ G
Sbjct: 197 DKGAWYKEEWRKKVERVGNLNYPDEARRQQIYGNLRMMVSINRDGSLYEVLVLESSG--- 253
Query: 230 LVRRMLRENARKAVIKSQAF 249
+ +L + A++ V + F
Sbjct: 254 --QPVLDQAAQRIVRLAAPF 271
>gi|27804812|gb|AAO22856.1| TonB-like protein [Myxococcus xanthus]
Length = 262
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 27/255 (10%), Positives = 65/255 (25%), Gaps = 29/255 (11%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPV 61
R+ + +S++ H++ L+ + K I +
Sbjct: 17 RMSRFVVVSVVGHILVLVAAIAYARFSATPKVDL-----------------DTKPIRATL 59
Query: 62 VQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVS 121
V+ L+ + D K + S + P
Sbjct: 60 VRLGKPRDSKLLPRKEQLPPPPKKVDAPKPAPEAPPPEPSPAKVAVPIPG-----VQPEP 114
Query: 122 PYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAI 181
K K +D + F + + + +
Sbjct: 115 STSKPTPQKGETTGEDRRKRLFGAFDKTAKAAEPEEAEGAEDGDPDGDSATAEGERYFGL 174
Query: 182 VRNRVIANWNIPSDFKRFKK--LRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENA 239
++++V ++++ ++ L+ + +L++ G VL G +
Sbjct: 175 LQSQVRRHYSVADTIPESERLHLKAMVAVRLSRTGEVLDVSLTKASGND-----LFDSAV 229
Query: 240 RKAVIKSQAFRLSPS 254
V K+ F P
Sbjct: 230 VTDVRKAAPFSPPPD 244
>gi|330972640|gb|EGH72706.1| TonB [Pseudomonas syringae pv. aceris str. M302273PT]
Length = 297
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/261 (10%), Positives = 80/261 (30%), Gaps = 26/261 (9%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP- 60
RL + I+ ++H+ +L + F + + P + L + + K
Sbjct: 20 RLGFTMMIAALIHLAVILGVGFTY----VKPEQISQTLEITLATFKSEEKPKQADFLAQD 75
Query: 61 ---------VVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALK 111
+ +++ +D V + + + +T ++++ +Q
Sbjct: 76 DQQGSGTLDKAETLKTTELAPYQDTKVNKVTPPPASKPVVKQEAPKTAVATTAPSQQKTV 135
Query: 112 ESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRK 171
P ++ ++ + RP L + +
Sbjct: 136 AKRDEVKPEPTTKAAPTFDSSELSNEIASLEAELSTEQQLYAKRPKIHRLNAASTMRDKG 195
Query: 172 RIPSQDAIAIVRNRVIANWNIPSDFKRFKK---LRVKMHFQLNQKGFVLGKINVDVVGGT 228
R +V N+ + +K +++ +N+ G + + ++ G
Sbjct: 196 AW----YKDDWRKKVERVGNLNYPEEARRKQIYGNLRLLVSINRDGSLYEVLVLESSG-- 249
Query: 229 ELVRRMLRENARKAVIKSQAF 249
+ +L + A++ V + F
Sbjct: 250 ---QPLLDQAAQRIVRLAAPF 267
>gi|298485000|ref|ZP_07003097.1| TonB protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335]
gi|298160410|gb|EFI01434.1| TonB protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335]
Length = 296
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/261 (10%), Positives = 80/261 (30%), Gaps = 26/261 (9%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP- 60
RL + I+ ++H+ +L + F + + P + L + + K
Sbjct: 19 RLGFTMMIAALIHLAVILGVGFTY----VKPEQISQTLEITLATFKSEEKPKQADFLAQD 74
Query: 61 ---------VVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALK 111
+ +++ +D V + + + +T ++++ +Q
Sbjct: 75 DQQGSGTLDKAETLKTTELAPYQDTKVNKVTPPPASKPVVKQEAPKTAVATTAPSQQKTV 134
Query: 112 ESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRK 171
P ++ ++ + RP L + +
Sbjct: 135 AKRDEVKPEPTTKAAPTFDSSELSNEIASLEAELSTEQQLYAKRPKIHRLNAASTMRDKG 194
Query: 172 RIPSQDAIAIVRNRVIANWNIPSDFKRFKK---LRVKMHFQLNQKGFVLGKINVDVVGGT 228
R +V N+ + +K +++ +N+ G + + ++ G
Sbjct: 195 AW----YKDDWRKKVERVGNLNYPEEARRKQIYGNLRLLVSINRDGSLYEVLVLESSG-- 248
Query: 229 ELVRRMLRENARKAVIKSQAF 249
+ +L + A++ V + F
Sbjct: 249 ---QPLLDQAAQRIVRLAAPF 266
>gi|94967624|ref|YP_589672.1| TonB-like protein [Candidatus Koribacter versatilis Ellin345]
gi|94549674|gb|ABF39598.1| Cell division and transport-associated protein TolA [Candidatus
Koribacter versatilis Ellin345]
Length = 267
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/260 (12%), Positives = 59/260 (22%), Gaps = 31/260 (11%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVP--------ISRREMLSVDNIYNEDYHSSKYKKI 57
L S ++HV ++ F P +S + +
Sbjct: 17 SLVASTVMHVGLTAVIVFTGWANFHHPGENWGGDTSGGGGAMSATLVSAIPLPRPVEETQ 76
Query: 58 EEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLR 117
KG +Q + D+ + K
Sbjct: 77 NVLANDSKGLTQTTPAVKETPPPEAIAIPDKQAKTKPQKAPPAPRDVKKP---------- 126
Query: 118 MPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQD 177
PV +I + ++ T + +
Sbjct: 127 KPVEEAKNNEIPYGEGGPASAMYSNAGTNFAMGTTKGGISVGQGGDFGNHYAY------- 179
Query: 178 AIAIVRNRVIANW-NIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLR 236
+ VR ++ NW D R + F +N+ G G L
Sbjct: 180 YVDAVRRKITENWLRYEIDPHTPPGKRTYITFDINRDGSPSNIRVEQSSG-----IPSLD 234
Query: 237 ENARKAVIKSQAFRLSPSTY 256
+A +A+ + F P Y
Sbjct: 235 ISATRALQRIDTFGPLPGGY 254
>gi|289624694|ref|ZP_06457648.1| TonB, C-terminal [Pseudomonas syringae pv. aesculi str. NCPPB3681]
gi|289647576|ref|ZP_06478919.1| TonB, C-terminal [Pseudomonas syringae pv. aesculi str. 2250]
gi|330865804|gb|EGH00513.1| TonB [Pseudomonas syringae pv. aesculi str. 0893_23]
Length = 285
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/261 (10%), Positives = 80/261 (30%), Gaps = 26/261 (9%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP- 60
RL + I+ ++H+ +L + F + + P + L + + K
Sbjct: 8 RLGFTMMIAALIHLAVILGVGFTY----VKPEQISQTLEITLATFKSEEKPKQADFLAQD 63
Query: 61 ---------VVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALK 111
+ +++ +D V + + + +T ++++ +Q
Sbjct: 64 DQQGSGTLDKAETLKTTELAPYQDTKVNKVTPPPASKPVVKQEAPKTAVATTAPSQQKTV 123
Query: 112 ESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRK 171
P ++ ++ + RP L + +
Sbjct: 124 AKRDEVKPEPTTKAAPTFDSSELSNEIASLEAELSTEQQLYAKRPKIHRLNAASTMRDKG 183
Query: 172 RIPSQDAIAIVRNRVIANWNIPSDFKRFKK---LRVKMHFQLNQKGFVLGKINVDVVGGT 228
R +V N+ + +K +++ +N+ G + + ++ G
Sbjct: 184 AW----YKDDWRKKVERVGNLNYPEEARRKQIYGNLRLLVSINRDGSLYEVLVLESSG-- 237
Query: 229 ELVRRMLRENARKAVIKSQAF 249
+ +L + A++ V + F
Sbjct: 238 ---QPLLDQAAQRIVRLAAPF 255
>gi|289676344|ref|ZP_06497234.1| TonB, C-terminal [Pseudomonas syringae pv. syringae FF5]
gi|330941627|gb|EGH44408.1| TonB [Pseudomonas syringae pv. pisi str. 1704B]
Length = 297
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/261 (10%), Positives = 80/261 (30%), Gaps = 26/261 (9%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP- 60
RL + I+ ++H+ +L + F + + P + L + + K
Sbjct: 20 RLGFTMMIAALIHLAVILGVGFTY----VKPEQISQTLEITLASFKSEEKPKQADFLAQD 75
Query: 61 ---------VVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALK 111
+ +++ +D V + + + +T ++++ +Q
Sbjct: 76 DQQGSGTLDKAETLKTTELAPYQDTKVNKVTPPPASKPVVKQEAPKTAVATTAPSQQKTV 135
Query: 112 ESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRK 171
P ++ ++ + RP L + +
Sbjct: 136 AKRDEVKPEPTTKAAPTFDSSELSNEIASLEAELSTEQQLYAKRPKIHRLNAASTMRDKG 195
Query: 172 RIPSQDAIAIVRNRVIANWNIPSDFKRFKK---LRVKMHFQLNQKGFVLGKINVDVVGGT 228
R +V N+ + +K +++ +N+ G + + ++ G
Sbjct: 196 AW----YKDDWRKKVERVGNLNYPEEARRKQIYGNLRLLVSINRDGSLYEVLVLESSG-- 249
Query: 229 ELVRRMLRENARKAVIKSQAF 249
+ +L + A++ V + F
Sbjct: 250 ---QPLLDQAAQRIVRLAAPF 267
>gi|288940689|ref|YP_003442929.1| protein TolA [Allochromatium vinosum DSM 180]
gi|288896061|gb|ADC61897.1| protein TolA [Allochromatium vinosum DSM 180]
Length = 457
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/218 (13%), Positives = 64/218 (29%), Gaps = 10/218 (4%)
Query: 54 YKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKES 113
+ EE + + E R + R + + + Q L E
Sbjct: 247 QRAEEERLAREARERAEQEARRMEAERERLRQEAERLAAEEAARLEAELERERRQQLAEE 306
Query: 114 ALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRI 173
A + + +EQ + + + + + ++E L+ +
Sbjct: 307 AERLAQEEERRLAEEIEQQRREQLAREQAAEDAQRAAVAEAQRAREEDLASRLAFEQIAR 366
Query: 174 PSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVL--GKINVDVVGGTELV 231
+ + ++R+RV W P L + +L G V+ V G T
Sbjct: 367 EADRYVPVIRDRVRQFWVRPPSA--GLDLVAVVSVRLIPGGEVVPNSVRVVRSSGHT--- 421
Query: 232 RRMLRENARKAVIKSQAFRLSP-STYKSWRNITLFFVP 268
++ AV + + ++ +R F P
Sbjct: 422 --AFDQSVVAAVYNASPLPVPSGPPFERFREFDFTFSP 457
>gi|71909519|ref|YP_287106.1| TonB, C-terminal [Dechloromonas aromatica RCB]
gi|71849140|gb|AAZ48636.1| TonB, C-terminal [Dechloromonas aromatica RCB]
Length = 296
Score = 67.2 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 36/265 (13%), Positives = 77/265 (29%), Gaps = 24/265 (9%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPV 61
RL L +S+ +H + L L F R + + + + +
Sbjct: 18 RLWIALGVSLFIHAVLLAL---EFKFPDASKAFRERAMDIILVNAKSARKPSDAQALAQA 74
Query: 62 VQFKGSSQENLVRDFSVQE------NGDRFSDQTKTHATENETKRSSSSKGEQALKESAL 115
G + + R + GD + ++ ++ + SA
Sbjct: 75 NLDGGGNTDENRRAKTPLPPTHQQTEGDAVQQMQRRVQELESAQQRLLTQAKSLRNVSAA 134
Query: 116 LRMPVSPYDKQKIS--KATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRI 173
P +S + + + KS D RP KK + ++ E+
Sbjct: 135 KTASEQPSPVPSVSGLDLAESARAMARLEGEISKSADEYSKRPRKKFVGARTEEYGLAA- 193
Query: 174 PSQDAIAIVRNRVIAN--WNIPSDFKRFKKLRVKMHFQLN-QKGFVLGKINVDVVGGTEL 230
+ + ++ N P + + V + +L + G + G
Sbjct: 194 ----YLDGWKQKIERIGTLNYPPEARGKLYGAVVIFVELRAEDGSLFNAEISRSSG---- 245
Query: 231 VRRMLRENARKAVIKSQAFRLSPST 255
++L + A + + S F P
Sbjct: 246 -HKVLDQAALRILRMSAPFGAIPQQ 269
>gi|330951385|gb|EGH51645.1| TonB [Pseudomonas syringae Cit 7]
Length = 297
Score = 67.2 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/257 (12%), Positives = 76/257 (29%), Gaps = 18/257 (7%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPV 61
RL + I+ ++H+ +L + F + + P + L + + K
Sbjct: 20 RLGFTMMIAALIHLAVILGVGFTY----VKPEQISQTLEITLATFKSEEKPKQADFLAQD 75
Query: 62 VQFKGS---SQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRM 118
Q E L + + T A++ K+ + S +
Sbjct: 76 DQQGSGTLDKAETLKTTELAPYQDTKVNKVTPPPASKPVVKQEAPKTAVATTAPSQQKTV 135
Query: 119 PVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQD- 177
K + + D +S + K+ + +
Sbjct: 136 AKRDEVKPEPATKAAPTFDSSELSNEIASLEAELSTEQQLYAKRPKIHRLNAASTMRDKG 195
Query: 178 --AIAIVRNRVIANWNIPSDFKRFKK---LRVKMHFQLNQKGFVLGKINVDVVGGTELVR 232
R +V N+ + +K +++ +N+ G + + ++ G +
Sbjct: 196 AWYKDDWRKKVERVGNLNYPEEARRKQIYGNLRLLVSINRDGSLYEVLVLESSG-----Q 250
Query: 233 RMLRENARKAVIKSQAF 249
+L + A++ V + F
Sbjct: 251 PLLDQAAQRIVRLAAPF 267
>gi|327481492|gb|AEA84802.1| biopolymer transport protein TolA [Pseudomonas stutzeri DSM 4166]
Length = 332
Score = 67.2 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/322 (10%), Positives = 91/322 (28%), Gaps = 66/322 (20%)
Query: 8 AISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGS 67
+++ LHV+ +L+ +F++ +P S+ ++ + + + ++ + K +
Sbjct: 17 VLAVGLHVIIFGMLFVSFSMTPELPPSKP-IVQATLYQLKSQSQATTQTNQKIAGEAKKT 75
Query: 68 SQENLVR---DFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYD 124
+ + + E + + + E +++ ++K +A +
Sbjct: 76 AAKQYEAEQMEQRKIEQQKQAAAKAAEQKKAEEARKAEAAKAAADKAAAAKKAEEAKKVE 135
Query: 125 KQKISK---------------------------------------------------ATN 133
+QK ++ A
Sbjct: 136 QQKQAEIAKKKAAEELAKKKAAEEAKKKAAEEAKKKAAEEAKKKAAAEAAKKKAAEEAKK 195
Query: 134 KEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIP 193
K AE K + + + + + ++R R W P
Sbjct: 196 KAAAEAARKAAEDKKAQALAELLSDTTERQQAMADTHGDQVAGNFDDLIRLRAAEGWTRP 255
Query: 194 SDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFR--- 250
+ + V++ + G + G +A AV
Sbjct: 256 PSAR--NNMTVQLQVNMLPDGTITNVSVSRSSGDV-----PFDNSAVAAVKNIGRLTEMQ 308
Query: 251 -LSPSTYKSWRNITLFFVPSKM 271
LSP ++ +R+ + F P +
Sbjct: 309 GLSPQEFQPYRSFKMTFTPEDL 330
>gi|146283139|ref|YP_001173292.1| biopolymer transport protein TolA [Pseudomonas stutzeri A1501]
gi|145571344|gb|ABP80450.1| biopolymer transport protein TolA [Pseudomonas stutzeri A1501]
Length = 332
Score = 67.2 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/322 (10%), Positives = 91/322 (28%), Gaps = 66/322 (20%)
Query: 8 AISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGS 67
+++ LHV+ +L+ +F++ +P S+ ++ + + + ++ + K +
Sbjct: 17 VLAVGLHVIIFGMLFVSFSMTPELPPSKP-IVQATLYQLKSQSQATTQTNQKIAGEAKKT 75
Query: 68 SQENLVR---DFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYD 124
+ + + E + + + E +++ ++K +A +
Sbjct: 76 AAKQYEAEQMEQRKIEQQKQAAAKAAEQKKAEEARKAEAAKAAADKTAAAKKADEAKKVE 135
Query: 125 KQKISK---------------------------------------------------ATN 133
+QK ++ A
Sbjct: 136 QQKQAEIAKKKAAEELAKKKAAEEAKKKAAEEAKKKAAEEAKKKAAAEAAKKKAAEEAKK 195
Query: 134 KEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIP 193
K AE K + + + + + ++R R W P
Sbjct: 196 KAAAEAARKAAEDKKAQALAELLSDTTERQQAMADTHGDQVAGNFDDLIRLRAAEGWTRP 255
Query: 194 SDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFR--- 250
+ + V++ + G + G +A AV
Sbjct: 256 PSAR--NNMTVQLQVNMLPDGTITNVSVSRSSGDV-----PFDNSAVAAVKNIGRLTEMQ 308
Query: 251 -LSPSTYKSWRNITLFFVPSKM 271
LSP ++ +R+ + F P +
Sbjct: 309 GLSPQEFQPYRSFKMTFTPEDL 330
>gi|296283272|ref|ZP_06861270.1| TonB protein [Citromicrobium bathyomarinum JL354]
Length = 273
Score = 67.2 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/211 (14%), Positives = 61/211 (28%), Gaps = 6/211 (2%)
Query: 62 VQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVS 121
+Q ++ + Q + + A S P
Sbjct: 59 PDPVREAQASVAPELGEQVSPPIEYVPPPPLPQPTTAPAPAPRPQPTARATSRPQPRPSP 118
Query: 122 PYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSR-KRIPSQDAIA 180
Q + + S + D + +S+ A
Sbjct: 119 RATAQPRPRPQPRPSATPTRSGGSRVGDDFLAGSGSSSTSTDTRIPASQIGNSAKASIAA 178
Query: 181 IVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLREN-- 238
+ ++ +W PS +++ + FQLN+ G + G+ + G R E
Sbjct: 179 AISRQIKPHWQPPSG-PDVEQIVSYISFQLNEDGSLKGRPRLVRQTGVNETNRAQAERHA 237
Query: 239 --ARKAVIKSQAFRLSPSTYKSWRNITLFFV 267
A +AV + F L P Y +W+++T
Sbjct: 238 EQAIRAVQLAAPFDLPPEYYNAWKSVTANLD 268
>gi|237654335|ref|YP_002890649.1| TonB family protein [Thauera sp. MZ1T]
gi|237625582|gb|ACR02272.1| TonB family protein [Thauera sp. MZ1T]
Length = 307
Score = 67.2 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/273 (12%), Positives = 78/273 (28%), Gaps = 19/273 (6%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
L IS+ LH + LL+ +F +R + L V + + ++
Sbjct: 30 LVAAFVISISLHALLLLI-HFRLP---EAKPARDKGLEVVLVNARHARAPDKAEVLAQAN 85
Query: 63 QFKGSSQENLVRDFSVQENGDRFSD------QTKTHATENETKRSSSSKGEQALKESALL 116
G + E VR + D + ++ ++ + K +A
Sbjct: 86 VDAGGNTEQEVRASTPLPPQPNRQDGDALVEAKRRAPEPVREQKQVITRDKAPAKVAAAP 145
Query: 117 RMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPS- 175
+ P + + + L + + + + K +R +
Sbjct: 146 KKVEQPTPTPEPQREISGLDLLDSAAAVARIEAQIDRDLKELAKRPRKKFIGARAQEYRF 205
Query: 176 QDAIAIVRNRVIAN--WNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRR 233
+ R +V N P + + + + G V G +
Sbjct: 206 AQYVEDWRQKVERIGTLNYPDAARGRLYGSLLLSVTIRSDGTVERMGVHRSSG-----HK 260
Query: 234 MLRENARKAVIKSQAF-RLSPSTYKSWRNITLF 265
+L + A + V + + P K + I +
Sbjct: 261 VLDDAALRIVKMAAPYAPFPPDIRKDYDVIEIT 293
>gi|319899381|ref|YP_004159478.1| TolA protein [Bartonella clarridgeiae 73]
gi|319403349|emb|CBI76908.1| TolA protein [Bartonella clarridgeiae 73]
Length = 400
Score = 67.2 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 27/237 (11%), Positives = 66/237 (27%), Gaps = 5/237 (2%)
Query: 34 SRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHA 93
+ E + + K + + ++ S + + S T T
Sbjct: 161 TVPEFMKNETKTPPQESELKEQTVPPTALEQIKSEDPIKKMLEELAQENPNESISTITPL 220
Query: 94 TENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVV 153
+ S ++ +E L + +
Sbjct: 221 DNIPLPSFKPKTKTVDPSHFQKEKKSPSKREQTIEDILAMEETHLINRARTQGGGAKRSS 280
Query: 154 VRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQK 213
R + + + + + + ++ ++ + + V++ F LN
Sbjct: 281 EREALGTQKNIGDSAKKAQTLVNLVGSCIQKKLK---LVAIGGNLNNRPVVRLQFYLNNH 337
Query: 214 GFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAF-RLSPSTYKSW-RNITLFFVP 268
G+V+G+ +D + G E ++ + AV Q + L Y W + P
Sbjct: 338 GYVIGEPKIDPLRGEESQLTIMTQQVYAAVFSCQPYENLPRDQYNLWGQGFDFNVDP 394
>gi|330721793|gb|EGG99776.1| TonB family protein [gamma proteobacterium IMCC2047]
Length = 304
Score = 67.2 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/254 (11%), Positives = 72/254 (28%), Gaps = 20/254 (7%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPV 61
RL L +++ LHVM ++ + F+F + V + +
Sbjct: 21 RLCFTLFLAVALHVMLIVGISFSF----DESPPASPSIEVTLSQTPSTTAPEKADFAADN 76
Query: 62 VQFKG-------SSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESA 114
Q G + + + Q + + +++
Sbjct: 77 NQEGGGILAESATPSVTQLSEHVSQHTTNTTPEAPAPSQKSQPAQQTQVVTTTANTNRKT 136
Query: 115 LLRMPVSPYDKQKISKATNKEQDLQG---ISFAEKKSIDTVVVRPDKKELLSKVEKSSRK 171
+P +K + + Q+ A+ D + + ++ S +R
Sbjct: 137 PTTRTTTPKNKLQQLREEISLQEQSMGLVSRDAKLDIYDQFLTKERTLKVNSVATLKARD 196
Query: 172 RIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELV 231
+ + I V + N+ +R + + + L G + G
Sbjct: 197 ALYVRQWIDKVERTGMRNY-PNEALRRNIEGSLVLKVVLLSDGTIRELRVTQSSG----- 250
Query: 232 RRMLRENARKAVIK 245
++L + A V +
Sbjct: 251 YKILDDAAINIVRR 264
>gi|227355892|ref|ZP_03840284.1| TonB family protein [Proteus mirabilis ATCC 29906]
gi|227163880|gb|EEI48782.1| TonB family protein [Proteus mirabilis ATCC 29906]
Length = 276
Score = 67.2 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/252 (12%), Positives = 87/252 (34%), Gaps = 22/252 (8%)
Query: 4 ENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQ 63
+G +S++ H + + YF Q V I + + ++ +K K+I Q
Sbjct: 25 YSGFILSIVFHFTLV-ISYFYITQQRPVIIHQPAPAVMLSLSENVQAVNKEKQIVGVDQQ 83
Query: 64 FKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPY 123
+SQ+ ++ + ++ ++ + + + + + A + P+
Sbjct: 84 MAVASQKKQQQEIAEKQPNLIINENADILLEKPKKVLQNQTSVKVAPSIAPTKPSPIVSE 143
Query: 124 DKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVR 183
+ +S + +V + + ++++ A +
Sbjct: 144 NVSSLSAP---------------STSHSVAKQQANDVSANYDSDANKEADALALWQAKAK 188
Query: 184 NRVIANWNIPSDFKRFKK-LRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKA 242
+ P + KR + K+ F ++ +G+V+ ++ G R L + A+
Sbjct: 189 GHLNRYKAYPEEAKRKGRTGAPKVRFIVDGQGYVIACELINSSG-----VRSLDKEAQSV 243
Query: 243 VIKSQAFRLSPS 254
+ ++Q P
Sbjct: 244 IKRAQPLPKPPE 255
>gi|258591275|emb|CBE67572.1| protein of unknown function [NC10 bacterium 'Dutch sediment']
Length = 278
Score = 67.2 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 29/243 (11%), Positives = 70/243 (28%), Gaps = 12/243 (4%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
+ + +S +LH + + + + P V I + + + P
Sbjct: 15 VSSSCGLSFLLHGLLAVAVVYGPQWLHGKPFIAPLNYEVTLISPAEENRELRRGAALPAQ 74
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
++ ++ S T A +E S+ + L + L P P
Sbjct: 75 PKVATAAISVPAGSRELLTLPSLSRTTSPKAQTDELTLSAKRRAPTRLPVAPPLTTPGPP 134
Query: 123 YDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQD--AIA 180
KI + +D + +
Sbjct: 135 ----KIVAPLVASVPVGAQPGIMSPVVDPAKAGAGRDPGTVAETGVTVGNTDPALAYYFV 190
Query: 181 IVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENAR 240
++++++ +NW P V + ++ + G + G+ R+L ++A
Sbjct: 191 LIQDKITSNWMPPKMSPGA-MAGVSVSLRILRSGQIRNLAV-----GSSSGDRLLDDSAV 244
Query: 241 KAV 243
+A+
Sbjct: 245 RAI 247
>gi|148550070|ref|YP_001270172.1| TonB family protein [Pseudomonas putida F1]
gi|148514128|gb|ABQ80988.1| TonB family protein [Pseudomonas putida F1]
Length = 301
Score = 67.2 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/260 (10%), Positives = 73/260 (28%), Gaps = 21/260 (8%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPV 61
RL L ++ ++H+ +L + F + P R + + + + +
Sbjct: 21 RLGFTLFLAALVHLALILGVGFTV----VKPAEIRHTMDITLATFKSEKPPEKADFQAQD 76
Query: 62 ---------VQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKE 112
+ + E S K+S+ +
Sbjct: 77 NQQGSGTLDKKAVPKTTELAPFQDSKINKITPPPAARPEVVPPPPPKKSAVVTTAPKPHK 136
Query: 113 SALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKR 172
K L + + + K+ + ++ +S R
Sbjct: 137 VEPKPKESKAQPKPATPTPDFDSSQLSSQIASLEAELSNEQQMYAKRPRIHRLNAASTMR 196
Query: 173 IPSQDAIAIVRNRVIANWNIPSDFKRFKK---LRVKMHFQLNQKGFVLGKINVDVVGGTE 229
R +V N+ + ++ ++M +N+ G + + ++ G
Sbjct: 197 DKGAWYKEEWRKKVERVGNLNYPDEARRQQIYGNLRMMVSINRDGSLYEVLVLESSG--- 253
Query: 230 LVRRMLRENARKAVIKSQAF 249
+ +L + A++ V + F
Sbjct: 254 --QPVLDQAAQRIVRLAAPF 271
>gi|309783087|ref|ZP_07677806.1| TonB protein [Ralstonia sp. 5_7_47FAA]
gi|308918195|gb|EFP63873.1| TonB protein [Ralstonia sp. 5_7_47FAA]
Length = 304
Score = 67.2 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 37/276 (13%), Positives = 79/276 (28%), Gaps = 22/276 (7%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
L L +S+ +HV+ L + + L V + + + V
Sbjct: 16 LTKALVVSLAVHVVLLFVRVVAPEAFDIKRED--PGLDVVLVNAKSSTAPSKATAVAQVN 73
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKG---EQALKESALLRMP 119
G + + + + + + + + +
Sbjct: 74 LNGGGEYDQQRATTPLPADTNEQTGDAIKLTQRRVEYLEQEQRRLLTQSTERAPLVNDRQ 133
Query: 120 VSPYDKQKISKATNKEQ-DLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDA 178
V P ++ + S + Q + ID + K+ + + +S +++
Sbjct: 134 VKPGERPQPSPTNGTDDRTTQDEIARLQAEIDRNLENYAKRPRRNVLTAASARQVDYARY 193
Query: 179 IAIVRNRVI----ANWNIPSDFKRFKKLRVKMHFQ------LNQKG-FVLGKINVDVVGG 227
VR ++ AN+ + + +L V + NQ G + G G
Sbjct: 194 YDAVRRKIEARGTANFPSQNGRPLYGELIVVISINREGQLGYNQDGYKIEGIEIAKSSGN 253
Query: 228 TELVRRMLRENARKAVIKSQAFRLSPSTYKSWRNIT 263
T L A V S F P+ + +I
Sbjct: 254 T-----ALDRQAVAIVRSSSPFGAFPAEMRKRVDIQ 284
>gi|319404774|emb|CBI78375.1| TolA protein [Bartonella rochalimae ATCC BAA-1498]
Length = 383
Score = 67.2 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/231 (12%), Positives = 63/231 (27%), Gaps = 4/231 (1%)
Query: 42 DNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRS 101
+ NE + + + V Q ++ T
Sbjct: 147 ELTKNEVKTLPQEPESTDQTVPPTALEQTKPEDPLEKILEELTEESPHESTPTMTLPDTI 206
Query: 102 SSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKEL 161
+ K + + K + ++ + + K
Sbjct: 207 PVPSFKPKEKPVDSSHLQKAQKSPPKGEQTIEDILAMEKTQLINRAKTQGGGAKRSNKPE 266
Query: 162 LSKVEKS-SRKRIPSQDAIAIVRNRVIANWNIPS-DFKRFKKLRVKMHFQLNQKGFVLGK 219
+K+ +Q + IV + + + K + V++ F LN G V+G+
Sbjct: 267 ALGAQKNIGDSEKKAQTLVNIVGTCIQQKLKLVAIGGKLNNRPVVRLQFYLNNNGNVIGE 326
Query: 220 INVDVVGGTELVRRMLRENARKAVIKSQAF-RLSPSTYKSW-RNITLFFVP 268
+D + G E ++ + AV Q + L Y W + P
Sbjct: 327 PKIDPLKGEESQLAIMTQQVYAAVFSCQPYENLPRDQYNLWGQGFDFNVDP 377
Score = 42.6 bits (98), Expect = 0.054, Method: Composition-based stats.
Identities = 14/179 (7%), Positives = 44/179 (24%), Gaps = 4/179 (2%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
++ L +S LH + +F EM + + + + P +
Sbjct: 9 MKKSLTLSFALHFILFSWGIIHFTPSSPFMQHPLEMAPITLSSLDQELAVQEGSSNAPPL 68
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
+ ++ + + + E +S + ++ A S
Sbjct: 69 EDSAPKPTTQPQEKEDARHFGEGTMDLQAPFQPKEKVQSMDATPSSFGQQDASDIPKTSL 128
Query: 123 YDK----QKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQD 177
+ ++ + +L + L + + ++
Sbjct: 129 KTQNLTTKETEALFHPVPELTKNEVKTLPQEPESTDQTVPPTALEQTKPEDPLEKILEE 187
>gi|73538253|ref|YP_298620.1| TonB, C-terminal [Ralstonia eutropha JMP134]
gi|72121590|gb|AAZ63776.1| TonB, C-terminal [Ralstonia eutropha JMP134]
Length = 253
Score = 67.2 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/273 (11%), Positives = 73/273 (26%), Gaps = 36/273 (13%)
Query: 1 MRLENGLAI---SMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKI 57
+R L ++ +H++ LLY+ + P E +S +
Sbjct: 11 VRERRTLICFLAALFMHMLLGALLYYGVRWRSAAP----EGVSAELWE------------ 54
Query: 58 EEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLR 117
E + + +V + + + +R + + + + +
Sbjct: 55 ---------PIAEAVPNEPAVAPTPSVKPAEEEPADISLQEQRRKAERAARDEARAQREK 105
Query: 118 MPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQD 177
+ +++ + +E + + + + + + PS
Sbjct: 106 QARAEAERKAAQREAQREAMEAQRQASNAEHQSQLARLRAQAGGANANAGTGTSGKPSSG 165
Query: 178 AIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRE 237
VR RV N + + Q+ G VL G +
Sbjct: 166 YAERVRRRVKPNIVFNEEVNG--NPAAVVAVQMAPDGSVLSTRLAKSSGNADW-----DN 218
Query: 238 NARKAVIKSQAFRLSPSTYKSWRNITLFFVPSK 270
+AV +S + I + F P
Sbjct: 219 AVLRAVSRSDPLPRDENGVAP-SEIRITFWPKD 250
>gi|325273061|ref|ZP_08139369.1| TonB family protein [Pseudomonas sp. TJI-51]
gi|324101795|gb|EGB99333.1| TonB family protein [Pseudomonas sp. TJI-51]
Length = 301
Score = 67.2 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/260 (11%), Positives = 83/260 (31%), Gaps = 21/260 (8%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPV 61
RL L ++ ++H+ +L + F + P R + + + + +
Sbjct: 21 RLGFTLFLAALVHLALILGVGFTV----VKPAEIRHTMDITLATFKSEKPPEKADFQAQD 76
Query: 62 VQFKGS--SQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMP 119
Q ++ + + V D ++ + + A+ +A
Sbjct: 77 NQQGSGTLVKKAVPKTTEVAPFQDSKINKITPPPAAKPEVVPPPTPQKSAVVTTAPKAHK 136
Query: 120 VSPYDKQKISKATNK-------EQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKR 172
V P K ++ L + + + K+ + ++ +S R
Sbjct: 137 VEPKPKPSKAQPKPAAPAPDFDSSQLSSQIASLEAELSNEQQLYAKRPRIHRLNAASTMR 196
Query: 173 IPSQDAIAIVRNRVIANWNIPSDFKRFKK---LRVKMHFQLNQKGFVLGKINVDVVGGTE 229
R +V N+ + ++ ++M +N+ G + + ++ G
Sbjct: 197 DKGAWYKEEWRKKVERVGNLNYPDEARRQQIYGNLRMMVSINRDGSLYEVLVLESSG--- 253
Query: 230 LVRRMLRENARKAVIKSQAF 249
+ +L + A++ V + F
Sbjct: 254 --QPVLDQAAQRIVRLAAPF 271
>gi|207721551|ref|YP_002251990.1| tonb-related protein [Ralstonia solanacearum MolK2]
gi|300703028|ref|YP_003744630.1| tonb-related transmembrane protein [Ralstonia solanacearum
CFBP2957]
gi|206586712|emb|CAQ17297.1| tonb-related protein [Ralstonia solanacearum MolK2]
gi|299070691|emb|CBJ41986.1| putative tonB-related transmembrane protein [Ralstonia solanacearum
CFBP2957]
Length = 304
Score = 67.2 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/276 (12%), Positives = 74/276 (26%), Gaps = 22/276 (7%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
L L S+ILH++ L + + L V + + + V
Sbjct: 16 LTKALVASLILHILLLFVRVVAPEAFDIKRDD--PGLDVVLVNAKSSTAPAKPTAVAQVN 73
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
G + + ++ + + SA +
Sbjct: 74 LNGGGEYDRQRATTPLPAETEQQTGDVIKLTQRRIEFLEEEQRRLLTQSRSAAPLVNART 133
Query: 123 YDKQKISKATN----KEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDA 178
+ + + ++ Q + ID + K+ + + +S +++
Sbjct: 134 VKPGEQPQPSPTNGTDDRTTQDEIARLQAEIDRNLENYAKRPRRNVLTAASARQVDYARY 193
Query: 179 IAIVRNRVIANW--NIPSDFKRFKKLRVKMHFQLNQKG---------FVLGKINVDVVGG 227
VR ++ N PS R + + +N+ G + G G
Sbjct: 194 YDAVRRKIETRGTANFPSLNGRPLYGELIVVISVNRDGQLGYNQDGYKIEGIEVAKSSGN 253
Query: 228 TELVRRMLRENARKAVIKSQAFRLSPSTYKSWRNIT 263
L A V S F P+ + +I
Sbjct: 254 -----PALDRQAVAIVRSSAPFGAFPAEMRKRVDIQ 284
>gi|170741557|ref|YP_001770212.1| protein TolA [Methylobacterium sp. 4-46]
gi|168195831|gb|ACA17778.1| protein TolA [Methylobacterium sp. 4-46]
Length = 464
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 21/135 (15%), Positives = 48/135 (35%), Gaps = 5/135 (3%)
Query: 136 QDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSD 195
L + A+ V+ + + + +++ ++ ++ P
Sbjct: 328 DMLATRAPAQASGATGREVQRTAALGTASGSAARLSPSQRDALVGLLQQQIERCYSAPPG 387
Query: 196 FKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLS--- 252
+ + ++ +LN G + + + GG+ V R + E A +AV + +R+
Sbjct: 388 AAQ-GVVLPQLDIRLNPDGSLGAEPRILRAGGS-AVDRSIAEAAVRAVRRCAPYRIPSQF 445
Query: 253 PSTYKSWRNITLFFV 267
Y WR I F
Sbjct: 446 APFYSDWRVINAEFE 460
>gi|90415255|ref|ZP_01223189.1| hypothetical protein GB2207_08066 [marine gamma proteobacterium
HTCC2207]
gi|90332578|gb|EAS47748.1| hypothetical protein GB2207_08066 [marine gamma proteobacterium
HTCC2207]
Length = 265
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 27/256 (10%), Positives = 71/256 (27%), Gaps = 33/256 (12%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPV 61
RL ++++++H + L+ L F L V +
Sbjct: 15 RLRKTFSLALVIHGLLLIGLSFAMPAGSPP----SPSLDVTLAQQPAEKAPDQADFIAQT 70
Query: 62 VQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVS 121
Q Q+ +++ + + + + T S + + A P
Sbjct: 71 NQLGADDQQTVLQPQNPWQQPSVEQLRIDSAEQALLTHNSDTQVSDSKETPKADQEQPDR 130
Query: 122 PYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAI 181
+ ++++ ++ + S K + +
Sbjct: 131 DAMQAELARLKQAYNNIPRVLRM---------------------TSVSAKSADAAAYMVY 169
Query: 182 VRNRVIANWNIPSDFKRFKK---LRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLREN 238
+V N+ + + +V++ + G + G R+L +
Sbjct: 170 FEEKVEQIGNLNYPREARSQGIFGQVQLIVVILADGRIRRIEVSKGSGS-----RLLDQA 224
Query: 239 ARKAVIKSQAFRLSPS 254
A ++V + F+ P
Sbjct: 225 AVRSVQLASPFKPFPK 240
>gi|330977059|gb|EGH77019.1| TonB [Pseudomonas syringae pv. aptata str. DSM 50252]
Length = 297
Score = 66.8 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 29/261 (11%), Positives = 79/261 (30%), Gaps = 26/261 (9%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPV 61
RL + I+ ++H+ +L + F + + P + L + + K
Sbjct: 20 RLGFTMMIAALIHLAVILGVGFTY----VKPEQISQTLEITLASFKSEEKPKQADFLAQD 75
Query: 62 VQFKGSSQENLV----------RDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALK 111
Q + + +D V + + + +T ++++ +Q
Sbjct: 76 DQQGSGTLDKAETLKTTELAPYQDTKVNKVTPPPASKPVVKQEAPKTAVATTAPSQQKTV 135
Query: 112 ESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRK 171
P ++ ++ + RP L + +
Sbjct: 136 AKRDEVKPEPTTKAAPTFDSSELSNEIASLEAELSTEQQLYAKRPKIHRLNAASTMRDKG 195
Query: 172 RIPSQDAIAIVRNRVIANWNIPSDFKRFKK---LRVKMHFQLNQKGFVLGKINVDVVGGT 228
R +V N+ + +K +++ +N+ G + + ++ G
Sbjct: 196 AW----YKDDWRKKVERVGNLNYPEEARRKQIYGNLRLLVSINRDGSLYEVLVLESSG-- 249
Query: 229 ELVRRMLRENARKAVIKSQAF 249
+ +L + A++ V + F
Sbjct: 250 ---QPLLDQAAQRIVRLAAPF 267
>gi|325983053|ref|YP_004295455.1| TonB family protein [Nitrosomonas sp. AL212]
gi|325532572|gb|ADZ27293.1| TonB family protein [Nitrosomonas sp. AL212]
Length = 295
Score = 66.8 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 26/263 (9%), Positives = 67/263 (25%), Gaps = 21/263 (7%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPV 61
R+ + +S +LH ++L F L V + N+ K K+
Sbjct: 13 RILVAIVVSFLLH--IVILFGVTFQFPHPQTDKIASSLEVVLVNNKTLSQPKESKLLAQD 70
Query: 62 VQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVS 121
G + ++ + + + + + K+ + S + ++
Sbjct: 71 NLDGGGNTDDDRKAKTPLPVLPKSKPILNEKVAQQKVKQLEQEAKKLMAAVSDIPQIQAL 130
Query: 122 PYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPS------ 175
+ I + + D+ + +
Sbjct: 131 ETQDNENEDENKPADVDANELLLRSLDIARLRAQVDQDHDSYQKRPKRKFVGARTREYRF 190
Query: 176 QDAIAIVRNRVIANWNIPSDFKRFKK---LRVKMHFQLNQKGFVLGKINVDVVGGTELVR 232
+ R +V N+ K+ +++ + G + G
Sbjct: 191 ARYVEDWRLKVERIGNLNYPEAARKEKLYGNLQLTVGIRADGSLESIEVNRSSGK----- 245
Query: 233 RMLRENARKAVIKS-----QAFR 250
++L + A V + F
Sbjct: 246 KILDDAAINIVKLAGQNGFAPFP 268
>gi|258405706|ref|YP_003198448.1| TonB family protein [Desulfohalobium retbaense DSM 5692]
gi|257797933|gb|ACV68870.1| TonB family protein [Desulfohalobium retbaense DSM 5692]
Length = 276
Score = 66.8 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 33/275 (12%), Positives = 79/275 (28%), Gaps = 21/275 (7%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRR-EMLSVDNIYNEDYHSSKYKKIEEPVVQF 64
+ S++LH +LL I ++ V+ + K E
Sbjct: 5 SILASLVLHATIVLLGVTQVFFPSSKRIDLDKQIYEVNLVQAPAPSKPAKKMPEPKAESP 64
Query: 65 KGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYD 124
+ + + + A + + + + + A K++ + P
Sbjct: 65 SAPEPKKTPAPQPKKTKSAPAPAKKEPAAAKKISAKKAPQPKKSAPKKAEKAQPKPKPKA 124
Query: 125 KQKISKATNKEQDLQGISFAEKKSIDTVVVRPD------------KKELLSKVEKSSRKR 172
Q + +D + +++ + +
Sbjct: 125 AQSQPTPDSVLKDALSDVAQRAEDESGEETMQALRSEVESLRASLQQQAGDAAAREGARA 184
Query: 173 IPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVR 232
+ A+V RV A W + ++LR ++ ++ +G + G D G
Sbjct: 185 GAVEVYAALVEQRVKAQWRY-AALGSSRQLRARVVVTISAQGTITGVQLQDASGNEG--- 240
Query: 233 RMLRENARKAVIKSQAFRLSPSTYKSWRNITLFFV 267
+ +AV +++ P R I++ F
Sbjct: 241 --FDRSVLRAVEDTESLPPPPGK--KLRQISITFN 271
>gi|238789618|ref|ZP_04633402.1| TonB domain protein [Yersinia frederiksenii ATCC 33641]
gi|238722371|gb|EEQ14027.1| TonB domain protein [Yersinia frederiksenii ATCC 33641]
Length = 275
Score = 66.8 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 32/250 (12%), Positives = 72/250 (28%), Gaps = 14/250 (5%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
++ H+ + LL F V + + V+ ++ + +
Sbjct: 16 SALLTSGFHIYLIWLLSNTF-VPINNTDGSPVAIMVELSAEPEFTPILEQ------IPAI 68
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
G Q E + T K A KE A ++ S +
Sbjct: 69 GILQTFNESMAEQFETQPEEVNDLITLPELPNASLIVEKKVVAAKKEPAKVKPLQSKVRE 128
Query: 126 QKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNR 185
+ + + + + + SS + + ++
Sbjct: 129 PRQPVIEPMPNSHSQPAPPAAATSALLS-GDSHQVAAAANSNSSHIQNIRMNWRGRLQGH 187
Query: 186 VIANWNIPSDFKRF-KKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVI 244
+ P D ++ ++ + F +NQ G+VL ++ G +L A A+
Sbjct: 188 LTNFKRYPFDARKKRQEGTATIRFVVNQDGYVLSAKLINSSGIG-----VLDTEALAAIK 242
Query: 245 KSQAFRLSPS 254
++Q P+
Sbjct: 243 RAQPLPKPPA 252
>gi|94496182|ref|ZP_01302760.1| hypothetical protein SKA58_03690 [Sphingomonas sp. SKA58]
gi|94424361|gb|EAT09384.1| hypothetical protein SKA58_03690 [Sphingomonas sp. SKA58]
Length = 321
Score = 66.8 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 40/312 (12%), Positives = 82/312 (26%), Gaps = 49/312 (15%)
Query: 6 GLAISMILHVMFLLLL---YFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
GL ++ HV+ LL + + L + ++ VD + + + P V
Sbjct: 8 GLGVATAGHVLLFGLLSAGFLSTPNPLKLNSPPMDVSLVDEVALKSMAPQISTQPPPPSV 67
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
E + + + + +P
Sbjct: 68 APDQGPTEEAAPAPEPAPAPEPTPAPPEPAPAPPRPAPKEAPVKPREKPAPPKKATAKAP 127
Query: 123 YDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRI--------- 173
+ ++ + + A K + T K ++ S +
Sbjct: 128 AKPKPAAEKPAAKAKPKPEKPASKPAAATPAKSSSKAKMTSDAPAKASGAGKADKPRGSL 187
Query: 174 ------------------------------PSQDAIAIVRNRVIANWNIPSDFKRFKKLR 203
A +R ++ +W PS +L
Sbjct: 188 LGKDFLKGIDTSADAPRKAAPPPAAAMGPAQKSALDAEIRRQLKPHWRPPSGA-DADQLV 246
Query: 204 VKMHFQLNQKGFVLGKINVD----VVGGTELVRRMLRENARKAVIKSQAF-RLSPSTYKS 258
+ +L++ G ++G V V ++ E A +AV + F L P Y
Sbjct: 247 TLLEVRLDKSGALVGTPQVIDQLGVTASNRPQAKLHAERAIQAVKLAAPFRNLPPEFYDQ 306
Query: 259 WRNIT-LFFVPS 269
W+ + L F
Sbjct: 307 WKWLRPLRFDAR 318
>gi|332704879|ref|ZP_08424967.1| protein TolA [Desulfovibrio africanus str. Walvis Bay]
gi|332555028|gb|EGJ52072.1| protein TolA [Desulfovibrio africanus str. Walvis Bay]
Length = 285
Score = 66.8 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 30/286 (10%), Positives = 75/286 (26%), Gaps = 30/286 (10%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPV---- 61
L +S+ LHV + + + + +VD + +
Sbjct: 8 ALTLSIFLHVALFGMALYMSRGTHVRVDLDVPVYNVDLVSLGRPGPAPKAPPVPVEQPKA 67
Query: 62 ----------------VQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSK 105
++ + + Q + + + + ATE K++ +
Sbjct: 68 PEAPKAPPAPEAKAVDIKEQPAPQPKPEAKPAPEAKPEAKPKPKQPEATEISPKKTDKAP 127
Query: 106 GEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKV 165
+ K + + K +K ++ K+ + + +
Sbjct: 128 LKPKAKPKEPTAQEIMA-EALKAAKTDASKKPQPSPQEVLKRELAELQKEVGSSPAAATA 186
Query: 166 EKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVV 225
+ Q R+ NW + L + + G + +
Sbjct: 187 AGNVGASTGQQVYAQDAVARIKPNWRY-PLAGTNQNLSAAVEMSVTPDGTITAFKLLKPS 245
Query: 226 GGTELVRRMLRENARKAVIKSQAFRLSPSTYKSWRNITLFFVPSKM 271
G + + KAV +++ P+ R I + F +
Sbjct: 246 GRAD-----FDASVLKAVDETKKLSPPPAGM---RTIQITFHLQDL 283
>gi|307824754|ref|ZP_07654977.1| TonB family protein [Methylobacter tundripaludum SV96]
gi|307734112|gb|EFO04966.1| TonB family protein [Methylobacter tundripaludum SV96]
Length = 292
Score = 66.5 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 31/252 (12%), Positives = 77/252 (30%), Gaps = 9/252 (3%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
L +++ L + +++ N P + + + + + ++ Q
Sbjct: 19 SLLVALFLAAVIHVVIGLGINFTAPQPEQVSRSIDITLVNMPTQKAPEKAQLLAQENQLG 78
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
Q Q + + +E E ++K K++ + S D
Sbjct: 79 AGEQSKKPEPPPQQLPSQGNNPAKQVKKSEPEHSEPKAAKKLITQKKAEKKIVTASKPDT 138
Query: 126 QKISKATNK-EQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRN 184
+ ++ + ++ A+ + + + ++ + V+ S + + + +
Sbjct: 139 GQHTEKHPQLTAEMLQQQIAQLGTEIRLNQQTAEQTKIKFVDSVSAHKYVAAQYMKDWED 198
Query: 185 RVIANWNIPSDFKRFKK---LRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARK 241
+V N+ KK + M + G + G L E A+K
Sbjct: 199 KVERTGNLNYPEVAAKKNFSGTLTMDVGIKADGSIYSIRINQSSGN-----PALDEAAKK 253
Query: 242 AVIKSQAFRLSP 253
V S F P
Sbjct: 254 IVRMSAPFAPLP 265
>gi|121611699|ref|YP_999506.1| TonB domain-containing protein [Verminephrobacter eiseniae EF01-2]
gi|121556339|gb|ABM60488.1| TonB, C-terminal domain [Verminephrobacter eiseniae EF01-2]
Length = 302
Score = 66.5 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 31/300 (10%), Positives = 82/300 (27%), Gaps = 51/300 (17%)
Query: 5 NGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQF 64
+ +S+++H + + L + + + + ++ + ++ V
Sbjct: 20 RAIVLSVLVHALLIGALTWGVHWKSS---TNPPAVTAELWAAAPRQAAVEPAAPPAVPPV 76
Query: 65 KGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYD 124
T+ E ++ + Q + L+
Sbjct: 77 VPPVAPAAAPTARPDTAPAAQPPDTRVADIAIEREKKRQERERQEAQRRERLQKKKEAEQ 136
Query: 125 KQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVE------------------ 166
+ K K++ L +++ + + + + +
Sbjct: 137 RAKQLAEQEKQKKLAQDKLRAEQAAKSKAQAQAQAQAQEQEQRLARQREDNLRRLQGLAG 196
Query: 167 ----------KSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFV 216
+S+ PS A V RV N P R ++ +L+ G +
Sbjct: 197 ASGGDNGAALRSAGPPGPSGSYSAKVSARVRPNIVYPDAI--AGNPRAEVEVRLSPDGTI 254
Query: 217 LGKINVDVVGGTELVRRMLRENARKAVIKSQAFR------LSPSTYKSWRNITLFFVPSK 270
+GK + + + +A+ K++ + PS + + F P
Sbjct: 255 VGKRLLQPSTS-----KAWDDAVLRALDKTETLPRDVDGRVPPS-------LVIGFRPQD 302
>gi|119383437|ref|YP_914493.1| TolA family protein [Paracoccus denitrificans PD1222]
gi|119373204|gb|ABL68797.1| Cell division and transport-associated protein TolA [Paracoccus
denitrificans PD1222]
Length = 514
Score = 66.5 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 23/122 (18%), Positives = 44/122 (36%), Gaps = 4/122 (3%)
Query: 152 VVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLN 211
++ ++ SQ R V WN S + V + F +
Sbjct: 387 EAMQDQGSAGSGGGGAAASGPPLSQGEKDGFRVAVEQCWNRGSLSTEASRTTVSVQFSMA 446
Query: 212 QKGFVL--GKINVDVVGGTELVRRMLRENARKAVIKSQA--FRLSPSTYKSWRNITLFFV 267
G V + GG++ + E AR+A++ + ++L P Y W+++ + F
Sbjct: 447 PDGTVEKGSLRMIGHDGGSDAAAKQAYEAARRAILMCEKGGYKLPPEKYNRWKDVIIDFN 506
Query: 268 PS 269
S
Sbjct: 507 AS 508
>gi|241664195|ref|YP_002982555.1| TonB family protein [Ralstonia pickettii 12D]
gi|240866222|gb|ACS63883.1| TonB family protein [Ralstonia pickettii 12D]
Length = 304
Score = 66.5 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 36/276 (13%), Positives = 78/276 (28%), Gaps = 22/276 (7%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
L L +S+ +HV+ L + + L V + + + V
Sbjct: 16 LTKALVVSLAVHVVLLFVRVVAPEAFDIKRED--PGLDVVLVNAKSSTAPSKATAVAQVN 73
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKG---EQALKESALLRMP 119
G + + + + + + + + +
Sbjct: 74 LNGGGEYDQQRATTPLPADTNEQTGDAIKLTQRRVEYLEQEQRRLLTQSTERAPLVNDRQ 133
Query: 120 VSPYDKQKISKATNKEQ-DLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDA 178
V P ++ + S + Q + ID + K+ + + +S +++
Sbjct: 134 VKPGERPQPSPTNGTDDRTTQDEIARLQAEIDRNLENYAKRPRRNVLTAASARQVDYARY 193
Query: 179 IAIVRNRVI----ANWNIPSDFKRFKKLRVKMHFQ------LNQKG-FVLGKINVDVVGG 227
VR ++ AN+ + + +L V + NQ G + G G
Sbjct: 194 YDAVRRKIEARGTANFPSQNGRPLYGELIVVISINREGQLGYNQDGYKIEGIEIAKSSGN 253
Query: 228 TELVRRMLRENARKAVIKSQAFRLSPSTYKSWRNIT 263
L A V S F P+ + +I
Sbjct: 254 -----PALDRQAVAIVRSSSPFGAFPAEMRKRVDIQ 284
>gi|71275797|ref|ZP_00652081.1| TolA protein [Xylella fastidiosa Dixon]
gi|71900396|ref|ZP_00682529.1| TolA protein [Xylella fastidiosa Ann-1]
gi|170730223|ref|YP_001775656.1| TolA protein [Xylella fastidiosa M12]
gi|71163375|gb|EAO13093.1| TolA protein [Xylella fastidiosa Dixon]
gi|71729828|gb|EAO31926.1| TolA protein [Xylella fastidiosa Ann-1]
gi|167965016|gb|ACA12026.1| TolA protein [Xylella fastidiosa M12]
Length = 346
Score = 66.5 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 27/246 (10%), Positives = 73/246 (29%), Gaps = 12/246 (4%)
Query: 29 LLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQEN--LVRDFSVQENGDRFS 86
++ ++ D + + + + Q QE L + Q+ ++
Sbjct: 108 SPQTEAQERIIQPDKVDQKQVSALAESQEMAKREQEAKHRQEQIDLTEERKRQQQAEQKL 167
Query: 87 DQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEK 146
+ + ++ ++ K + L + + + + + A +
Sbjct: 168 RLARQQQEIMRKQVEEHAQIDRLKKLTELRKRREQLETQIQSDAKQADLAEQKLRQLAAE 227
Query: 147 KSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKM 206
+S + + + K+ + A ++ V W+ P + +
Sbjct: 228 RSQQSSTSPVNNTNGVQGSGKNVDNKGLRDKYKAAIQQAVSGQWSRPPSVPLGQ--ECMI 285
Query: 207 HFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPSTYK--SWRNITL 264
H G VL + RR + AV+++Q ++ R++
Sbjct: 286 HITQLPGGRVLSAEVAPDCPYDDAGRR----SIESAVMRAQPL--PYRGFEPVFERDVYF 339
Query: 265 FFVPSK 270
F+P
Sbjct: 340 KFIPED 345
>gi|222054199|ref|YP_002536561.1| TonB family protein [Geobacter sp. FRC-32]
gi|221563488|gb|ACM19460.1| TonB family protein [Geobacter sp. FRC-32]
Length = 255
Score = 66.5 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 31/266 (11%), Positives = 73/266 (27%), Gaps = 34/266 (12%)
Query: 7 LAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKG 66
L S + H + + L+ FN + + VD +
Sbjct: 16 LVCSFLFH-LVIFLIITRFNFLPGLYTDNTPVYYVDVVSL-----------------PVA 57
Query: 67 SSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQ 126
S Q S T + + + + + E + + + +
Sbjct: 58 SPQAGTPAGGSPASVPVTEPSPPTTESQQMKLPSTKPAPKEAGKPQPKTAAGVETAREFE 117
Query: 127 KISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRV 186
+ +E + + + A + + + + D +R+R+
Sbjct: 118 ERLAKLERENEARHQAAALEAARKRAAGIGKGPTGMPAATGTEAGS----DYSNYIRSRL 173
Query: 187 IANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKS 246
+ FK + V++ + + G ++ K M +A+ ++
Sbjct: 174 EDAFRQEDTFKPDRNKVVEVKLTIGRNGKIISKRFERSSND-----IMFNNAVERAISRA 228
Query: 247 QA-FRLSPST--YKSWRNITLFFVPS 269
+ FR P Y+ F P
Sbjct: 229 ERDFRPPPGGGSYEH----GFVFKPQ 250
>gi|329908801|ref|ZP_08274959.1| TonB protein [Oxalobacteraceae bacterium IMCC9480]
gi|327546594|gb|EGF31565.1| TonB protein [Oxalobacteraceae bacterium IMCC9480]
Length = 297
Score = 66.1 bits (159), Expect = 4e-09, Method: Composition-based stats.
Identities = 36/278 (12%), Positives = 82/278 (29%), Gaps = 21/278 (7%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
L +A+S+++H L + + + + P L V + + ++
Sbjct: 10 LTIAIAVSVLVHGALLAVRFTSPELFRQKPDD--PGLEVILVNAKHKAPPLKAEVLAQAN 67
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKG--EQALKESALLRMPV 120
G + E + + + + + K Q K + L+
Sbjct: 68 LDGGGNAEAGRTKSPLPDLRRTQDGDSVQATRRRVSDLEQAQKKLLSQINKPTPLVIPSF 127
Query: 121 SPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPS-QDAI 179
S + K + D ++ + + + K + + R
Sbjct: 128 SDLARLKQPPLPDGNDDQDSTKSIARREAEIARNIEEYNKRPKKTQITPNTREVGYAMYY 187
Query: 180 AIVRNRVIANWNIPSDFKRFKKL--RVKMHFQLNQKGFV---LGKINVDVVGGTELVRRM 234
+++R+ + + KKL + ++ + Q G + G V+ G
Sbjct: 188 KSLQDRIEKRGTVNFPQQDGKKLYGELVLYIPVYQDGTIYERDGGPRVERSSGN----PA 243
Query: 235 LRENARKAVIKSQAF-RLSP-----STYKSWRNITLFF 266
L A + V ++ F + P W I F
Sbjct: 244 LDNAALRIVRRAAPFGKFPPNMRSSDKDDVW-EIITRF 280
>gi|313500970|gb|ADR62336.1| TonB family protein [Pseudomonas putida BIRD-1]
Length = 301
Score = 66.1 bits (159), Expect = 5e-09, Method: Composition-based stats.
Identities = 30/260 (11%), Positives = 82/260 (31%), Gaps = 21/260 (8%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPV 61
RL L ++ ++H+ +L + F + P R + + + + +
Sbjct: 21 RLGFTLFLAALVHLALILGVGFTV----VKPAEIRHTMDITLATFKSEKPPEKADFQAQD 76
Query: 62 VQFKGSSQENLVRDFSVQENG--DRFSDQTKTHATENETKRSSSSKGEQALKESALLRMP 119
Q + + + + D ++ + A+ +A
Sbjct: 77 NQQGSGTLDKKAVPKTTELAPFQDSKINKITPPPAARPEVVPPPPPKKSAVVTTAPKPHK 136
Query: 120 VSPYDKQKISKATNK-------EQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKR 172
V P K+ ++ L + + + K+ + ++ +S R
Sbjct: 137 VEPKPKESKAQPKPAAPAPDFDSSQLSSQIASLEAELSNEQQMYAKRPRIHRLNAASTMR 196
Query: 173 IPSQDAIAIVRNRVIANWNIPSDFKRFKK---LRVKMHFQLNQKGFVLGKINVDVVGGTE 229
R +V N+ + ++ ++M +N+ G + + ++ G
Sbjct: 197 DKGAWYKEEWRKKVERVGNLNYPDEARRQQIYGNLRMMVSINRDGSLYEVLVLESSG--- 253
Query: 230 LVRRMLRENARKAVIKSQAF 249
+ +L + A++ V + F
Sbjct: 254 --QPVLDQAAQRIVRLAAPF 271
>gi|71065190|ref|YP_263917.1| hypothetical protein Psyc_0624 [Psychrobacter arcticus 273-4]
gi|71038175|gb|AAZ18483.1| conserved hypothetical protein [Psychrobacter arcticus 273-4]
Length = 323
Score = 66.1 bits (159), Expect = 5e-09, Method: Composition-based stats.
Identities = 35/271 (12%), Positives = 81/271 (29%), Gaps = 15/271 (5%)
Query: 1 MRLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP 60
+ L + I++ +H + + + F+ P + + + + + + I
Sbjct: 49 ISLPMAIVIAITVHALIIFGVSFSMG---QDPAGLMQDV-AKALTDNMQPNEDAQFIANA 104
Query: 61 VVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPV 120
Q G+ QE L ++ + + E L+ + R
Sbjct: 105 SQQGGGTVQEQLRQETDQSSPLSAEQMSETQDVIRLQRQVRQQRYQESYLRTTLSWRHAS 164
Query: 121 SPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKV---EKSSRKRIPSQD 177
D + + + + R SKV + +S + D
Sbjct: 165 VESDNDSKQAQDDMRVQEERLRKQIATLEAQLSQRQQTYATKSKVVTMDSNSTTHGAAAD 224
Query: 178 AIAIVRNRVIANWNIPSDFKRFKK---LRVKMHFQLNQKGFVLGKINVDVVGGTELVRRM 234
I R V N+ + + V++ + G + ++ T +
Sbjct: 225 YINTFREHVERVGNLQYPAQARAQSITGEVRLMVIIANDGNIKAIRLLESSNST-----I 279
Query: 235 LRENARKAVIKSQAFRLSPSTYKSWRNITLF 265
L E A+++V ++ F + K + L
Sbjct: 280 LDEAAKQSVRQAAPFGKFTADMKDIVELRLI 310
>gi|83746787|ref|ZP_00943835.1| Transporter [Ralstonia solanacearum UW551]
gi|207744335|ref|YP_002260727.1| tonb-related protein [Ralstonia solanacearum IPO1609]
gi|83726556|gb|EAP73686.1| Transporter [Ralstonia solanacearum UW551]
gi|206595740|emb|CAQ62667.1| tonb-related protein [Ralstonia solanacearum IPO1609]
Length = 304
Score = 66.1 bits (159), Expect = 5e-09, Method: Composition-based stats.
Identities = 35/276 (12%), Positives = 74/276 (26%), Gaps = 22/276 (7%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
L L S+ILH++ L + + L V + + + V
Sbjct: 16 LTKALVASLILHILLLFVRVVAPEAFDIKRDD--PGLDVVLVNAKSSTAPAKPTAVAQVN 73
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
G + + ++ + + SA +
Sbjct: 74 LNGGGEYDRQRATTPLPAETEQQTGDVIKLTQRRIEFLEEEQRRLLTQSRSAAPLVNART 133
Query: 123 YDKQKISKATN----KEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDA 178
+ + + ++ Q + ID + K+ + + +S +++
Sbjct: 134 VKPGEQPQPSPTNGTDDRTTQDEIARLQAEIDRNLENYAKRPRRNVLTAASARQVDYARY 193
Query: 179 IAIVRNRVIANW--NIPSDFKRFKKLRVKMHFQLNQKG---------FVLGKINVDVVGG 227
VR ++ N PS R + + +N+ G + G G
Sbjct: 194 YDAVRRKIETRGTANFPSLNGRPLYGELIVVISVNRDGQLGYNQDGYKIEGIDVAKSSGN 253
Query: 228 TELVRRMLRENARKAVIKSQAFRLSPSTYKSWRNIT 263
L A V S F P+ + +I
Sbjct: 254 -----PALDRQAVAIVRSSAPFGAFPAEMRKRVDIQ 284
>gi|116619650|ref|YP_821806.1| TonB family protein [Candidatus Solibacter usitatus Ellin6076]
gi|116222812|gb|ABJ81521.1| TonB family protein [Candidatus Solibacter usitatus Ellin6076]
Length = 263
Score = 66.1 bits (159), Expect = 5e-09, Method: Composition-based stats.
Identities = 34/246 (13%), Positives = 68/246 (27%), Gaps = 18/246 (7%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPV 61
R+ L S+ H + + + VQ I+ + + + I P
Sbjct: 12 RIGRPLLGSIAFHGLLVAAMLATGWVQNRDRITLGDP---NGGRFGSVTVNPVASIPLPN 68
Query: 62 VQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVS 121
+ S + LK S P
Sbjct: 69 RDTAKNPVAVDTESNVPTPVSKPKPTPKVKLPDPKAIALPSRDAKNKPLKPSEASSQPN- 127
Query: 122 PYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAI 181
K ++++L ++ + + + + +S I
Sbjct: 128 --------KWRAQQKELPNQVYSTAGTRASTPDFALQGGGGVGIGNNSPFGNQFGAYADI 179
Query: 182 VRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARK 241
+RNRV W +D + V + F L++ G G G + L +A++
Sbjct: 180 LRNRVAQYWK-TADIRAANNTIVGVTFVLHRDGSATGVRITQKSGNSS-----LDISAQR 233
Query: 242 AVIKSQ 247
AV+ +
Sbjct: 234 AVMDAS 239
>gi|187930090|ref|YP_001900577.1| TonB family protein [Ralstonia pickettii 12J]
gi|187726980|gb|ACD28145.1| TonB family protein [Ralstonia pickettii 12J]
Length = 304
Score = 66.1 bits (159), Expect = 5e-09, Method: Composition-based stats.
Identities = 36/276 (13%), Positives = 78/276 (28%), Gaps = 22/276 (7%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
L L +S+ +HV+ L + + L V + + + V
Sbjct: 16 LTKALVVSLAVHVVLLFVRVVAPEAFDIKRDD--PGLDVVLVNAKSSTAPSKATAVAQVN 73
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKG---EQALKESALLRMP 119
G + + + + + + + + +
Sbjct: 74 LNGGGEYDQQRATTPLPADTNEQTGDAIKLTQRRVEYLEQEQRRLLTQSTERAPLVNDRQ 133
Query: 120 VSPYDKQKISKATNKEQ-DLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDA 178
V P ++ + S + Q + ID + K+ + + +S +++
Sbjct: 134 VKPGERPQPSPTNGTDDRTTQDEIARLQAEIDRNLENYAKRPRRNVLTAASARQVDYARY 193
Query: 179 IAIVRNRVI----ANWNIPSDFKRFKKLRVKMHFQ------LNQKG-FVLGKINVDVVGG 227
VR ++ AN+ + + +L V + NQ G + G G
Sbjct: 194 YDAVRRKIEARGTANFPSQNGRPLYGELIVVISINREGQLGYNQDGYKIEGIEIAKSSGN 253
Query: 228 TELVRRMLRENARKAVIKSQAFRLSPSTYKSWRNIT 263
L A V S F P+ + +I
Sbjct: 254 -----PALDRQAVAIVRSSSPFGAFPAEMRKRVDIQ 284
>gi|197285409|ref|YP_002151281.1| TonB-like protein [Proteus mirabilis HI4320]
gi|194682896|emb|CAR43250.1| TonB-like protein [Proteus mirabilis HI4320]
Length = 269
Score = 66.1 bits (159), Expect = 5e-09, Method: Composition-based stats.
Identities = 32/252 (12%), Positives = 87/252 (34%), Gaps = 22/252 (8%)
Query: 4 ENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQ 63
+G +S++ H + + YF Q V I + + ++ +K K+I Q
Sbjct: 18 YSGFILSIVFHFTLV-ISYFYITQQRPVIIHQPAPAVMLSLSENVQAVNKEKQIVGVDQQ 76
Query: 64 FKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPY 123
+SQ+ ++ + ++ ++ + + + + + A + P+
Sbjct: 77 MAVASQKKQQQEIAEKQPNLIINENADILLEKPKKVLQNQTSVKVAPSIAPTKPSPIVSE 136
Query: 124 DKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVR 183
+ +S + +V + + ++++ A +
Sbjct: 137 NVSSLSAP---------------STSHSVAKQQANDVSANYDSDANKEADALALWQAKAK 181
Query: 184 NRVIANWNIPSDFKRFKK-LRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKA 242
+ P + KR + K+ F ++ +G+V+ ++ G R L + A+
Sbjct: 182 GHLNRYKAYPEEAKRKGRTGAPKVRFIVDGQGYVIACELINSSG-----VRSLDKEAQSV 236
Query: 243 VIKSQAFRLSPS 254
+ ++Q P
Sbjct: 237 IKRAQPLPKPPE 248
>gi|110679375|ref|YP_682382.1| hypothetical protein RD1_2096 [Roseobacter denitrificans OCh 114]
gi|109455491|gb|ABG31696.1| conserved hypothetical protein [Roseobacter denitrificans OCh 114]
Length = 346
Score = 66.1 bits (159), Expect = 5e-09, Method: Composition-based stats.
Identities = 35/236 (14%), Positives = 60/236 (25%), Gaps = 4/236 (1%)
Query: 40 SVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETK 99
D S V + + E D T E
Sbjct: 108 EADIAVLAPDVSDTPVPQAADRVAPEAFAPPAPEALPDPVERDAVAPDATGDDTQEPADA 167
Query: 100 RSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKK 159
+ + + + E+ + + + +
Sbjct: 168 TAPEAAATEIVTEADRPARAPEQSQRPPARRPEAPVRTAVAAPQTPPTEDAVNAALQEAL 227
Query: 160 ELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVL-- 217
+ + S +R V WN+ S V + + Q G +
Sbjct: 228 SNETPAPAVPQGPPLSAGEKDALRVAVSNCWNVGSLSTDALGTTVVVEVSMTQDGKPITG 287
Query: 218 GKINVDVVGGTELVRRMLRENARKAVIKSQA--FRLSPSTYKSWRNITLFFVPSKM 271
GG+E R E AR+A+I+ A F L Y W+ I + F P +M
Sbjct: 288 SIRMTSSSGGSEAAARQAFEAARRAIIRCGARGFNLPVEKYSQWQEIEMTFNPERM 343
>gi|254784481|ref|YP_003071909.1| TonB domain-containing protein [Teredinibacter turnerae T7901]
gi|237686122|gb|ACR13386.1| TonB domain protein [Teredinibacter turnerae T7901]
Length = 291
Score = 66.1 bits (159), Expect = 5e-09, Method: Composition-based stats.
Identities = 35/265 (13%), Positives = 81/265 (30%), Gaps = 23/265 (8%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPV 61
RL G+ ++ LH M +L + L++ ++ +S
Sbjct: 12 RLIFGMFLASALHAMLIL----GVDTGAHNGTKLAPTLNITLATHKSNNSPDKADFLAQF 67
Query: 62 VQFKGSSQE--NLVRDFSVQENGDRFSDQTKTHATENETKRSSS---------SKGEQAL 110
Q + + V + E D + + S +
Sbjct: 68 NQQASGTADSVKEVTTDKLAEIEDTQVRDVNPLPQRKASTDTPSTAQLLATTRPRDRAIT 127
Query: 111 KESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSR 170
++ VS + A + ++ + + + +P + L S K+S
Sbjct: 128 RQDDTAIKSVSDISDGALVDAPLESTEIASLRAKLDRERQALANKPRTRRLTSASTKASY 187
Query: 171 KRIPSQDAIAIVRNRVIANWNIPSDF-KRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTE 229
D + + N N P++ ++ +++ +++ G V ++ G
Sbjct: 188 DAAYLNDW--AFKVESVGNANFPAEALQQAIFGSLRVAVLIDRYGKVKRVEILESSG--- 242
Query: 230 LVRRMLRENARKAVIKSQAFRLSPS 254
R+L + R+ V + F P
Sbjct: 243 --HRLLDDATRQIVRLASPFPPLPE 265
>gi|21232358|ref|NP_638275.1| TonB protein [Xanthomonas campestris pv. campestris str. ATCC
33913]
gi|66767509|ref|YP_242271.1| TonB protein [Xanthomonas campestris pv. campestris str. 8004]
gi|21114132|gb|AAM42199.1| TonB protein [Xanthomonas campestris pv. campestris str. ATCC
33913]
gi|66572841|gb|AAY48251.1| TonB protein [Xanthomonas campestris pv. campestris str. 8004]
Length = 291
Score = 66.1 bits (159), Expect = 5e-09, Method: Composition-based stats.
Identities = 40/259 (15%), Positives = 78/259 (30%), Gaps = 17/259 (6%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP- 60
RL L IS++LH + +L + F + + + + S + + + +
Sbjct: 16 RLTATLVISLLLHGLLILGVGFAVSEDAPLVPTLDVIFSQTSTPLTPKQADFLAQANQQG 75
Query: 61 -----VVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESAL 115
Q SQ +V T +T+ SS +GEQA+
Sbjct: 76 GGNHDTAQRPRDSQPGVVPQDRNGLAPQAQRATTVQAPLPTQTRVVSSRRGEQAVPTPQP 135
Query: 116 LRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPS 175
+ AE + ++ +S +
Sbjct: 136 NPQTDPLSPAD---AQRVQRDAEMARLAAEVHLRSEQYAKRPNRKFVSASTREYAYANYL 192
Query: 176 QDAIAIVRNRVIANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRM 234
+ + R + N N P + +R + +V + + + G V + G +
Sbjct: 193 RAWVD--RAERVGNLNYPDEARRRRLGGKVVITVGVRRDGSVESSRVLVSSGT-----PV 245
Query: 235 LRENARKAVIKSQAFRLSP 253
L A + V +Q F P
Sbjct: 246 LDAAALRVVQLAQPFPPLP 264
>gi|88705485|ref|ZP_01103196.1| tonB domain protein [Congregibacter litoralis KT71]
gi|88700575|gb|EAQ97683.1| tonB domain protein [Congregibacter litoralis KT71]
Length = 283
Score = 66.1 bits (159), Expect = 5e-09, Method: Composition-based stats.
Identities = 32/257 (12%), Positives = 78/257 (30%), Gaps = 13/257 (5%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPV 61
RL + I+ LHV+ + F + + R + V + I +
Sbjct: 11 RLMLAVLIASTLHVLLI----FGVSFDVWRGQKARHQVEVTLVQTPGRRPVTADHIAQAD 66
Query: 62 VQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALK-ESALLRMPV 120
GS + + + T N + ++ + E ++
Sbjct: 67 QTGSGSEALRDRASGAKSALPQPIAQSAQRQTTANAGRERLAAPAVTSTNGERKVVDRRG 126
Query: 121 SPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIA 180
+ + + +A + LQ + ++ + + + ++ S +A
Sbjct: 127 EQQNLEDLPEAERELARLQQKLAQLQADLNVQRQQYSNQPRVRRLTAVSASAAVDAAYLA 186
Query: 181 IVRNRVIANWN---IPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRE 237
R+RV + N + + ++M + + G + + G +L E
Sbjct: 187 DWRSRVESVGNQYYPEASLRYGIYGSLEMLVTVRKDGSLEDIDILRSSG-----YAVLDE 241
Query: 238 NARKAVIKSQAFRLSPS 254
A + V + + P
Sbjct: 242 AAMRIVRLAAPYSPFPD 258
>gi|188584486|ref|YP_001927931.1| protein TolA [Methylobacterium populi BJ001]
gi|179347984|gb|ACB83396.1| protein TolA [Methylobacterium populi BJ001]
Length = 458
Score = 66.1 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 18/153 (11%), Positives = 49/153 (32%), Gaps = 7/153 (4%)
Query: 121 SPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIA 180
+ + Q L + ++ V+ + +
Sbjct: 307 QQAELANKFSPGDIRQTLASKAASQSTGSTGREVQRTASLGAATGNAQRLSPSLRDALVG 366
Query: 181 IVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENAR 240
+++ ++ ++ P + + + +LN G + + V + G V + + + A
Sbjct: 367 MLQQQIERCYSAPPGATQ-GVVLPMLDIRLNPDGSLTAEPRV-MRAGNNSVDQSIAQAAL 424
Query: 241 KAVIKSQAFRLSPS---TYKSWRNI--TLFFVP 268
+AV + +++ Y W+ I F P
Sbjct: 425 RAVRRCAPYKIPAQYAPYYNDWKAINAEFEFSP 457
>gi|15838496|ref|NP_299184.1| TolA protein [Xylella fastidiosa 9a5c]
gi|9106993|gb|AAF84704.1|AE004010_1 TolA protein [Xylella fastidiosa 9a5c]
Length = 346
Score = 65.7 bits (158), Expect = 6e-09, Method: Composition-based stats.
Identities = 27/246 (10%), Positives = 71/246 (28%), Gaps = 12/246 (4%)
Query: 29 LLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQEN--LVRDFSVQENGDRFS 86
++ ++ D + + + + Q QE L + Q+ ++
Sbjct: 108 SPQTEAQERIIQPDKVDQKQVSALAESQEMAKREQEAKHRQEQIDLTEERKRQQQAEQKL 167
Query: 87 DQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEK 146
+ + ++ ++ K + L + + + + + A +
Sbjct: 168 RLARQQEEIMRKQVEEHAQIDRLKKLTELRKRREQLETQIQSDAKQADLAEQKLRQLAAE 227
Query: 147 KSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKM 206
+S + K+ + A ++ V W+ P + +
Sbjct: 228 RSQQSSPSPVSNTNGGQGSGKNVDNKGLLDKYKAAIQQAVSGQWSRPPSVPLGQ--ECMI 285
Query: 207 HFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPSTYK--SWRNITL 264
H G VL + RR + AV+++Q ++ R++
Sbjct: 286 HITQLPGGRVLSAEVAPDCPYDDAGRR----SIESAVMRAQPL--PYRGFEPVFERDVYF 339
Query: 265 FFVPSK 270
F+P
Sbjct: 340 KFIPED 345
>gi|189500641|ref|YP_001960111.1| hypothetical protein Cphamn1_1712 [Chlorobium phaeobacteroides BS1]
gi|189496082|gb|ACE04630.1| conserved hypothetical protein [Chlorobium phaeobacteroides BS1]
Length = 280
Score = 65.7 bits (158), Expect = 6e-09, Method: Composition-based stats.
Identities = 24/239 (10%), Positives = 60/239 (25%), Gaps = 17/239 (7%)
Query: 33 ISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTH 92
++ SV+ + D S + + + + +
Sbjct: 54 VTLPGPGSVERVDMSDGLPSPPEPEPVEEPEISQPEVTQPPPLPAEPKKRKAVKKVPEKI 113
Query: 93 ATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTV 152
+ ++ +S + E + + S ++++ K +
Sbjct: 114 VRKPVQEKKTSVEESLEKLEQKVEKAQPSDFERKLALLQQK----------VSKGPPSDL 163
Query: 153 VVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDF-KRFKKLRVKMHFQLN 211
R + P + +R + NW+ ++ ++ + +
Sbjct: 164 YTRTGPGRSGPGDGEYGAPLSPLERYAVAIRAIITRNWSFTPQLIQQKGEVIAYVAMTIQ 223
Query: 212 QKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAF-RLSPSTYKSWRNITLFFVPS 269
G V G + + KA+ KS + P I F P
Sbjct: 224 TGGAVSGITFDRKSSS-----QYFDDTVLKAIEKSSPLPPVPPEVSGKALRIGFVFTPQ 277
>gi|313497573|gb|ADR58939.1| Protein TolA [Pseudomonas putida BIRD-1]
Length = 115
Score = 65.7 bits (158), Expect = 6e-09, Method: Composition-based stats.
Identities = 17/119 (14%), Positives = 34/119 (28%), Gaps = 11/119 (9%)
Query: 157 DKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFV 216
+ + + D ++R R W P + K + V + + G +
Sbjct: 2 SDTTERQQALADEQGDQVAGDFDDLIRMRAAEGWARPPSAR--KGMTVVLQINMLPDGTI 59
Query: 217 LGKINVDVVGGTELVRRMLRENARKAVIKSQAFR----LSPSTYKSWRNITLFFVPSKM 271
G +A AV + PS + +R+ + F P +
Sbjct: 60 TSVSVARSSGDG-----PYDSSAVAAVKNIGRLTEMQGMKPSDFNQYRSFKMTFTPEDL 113
>gi|149927731|ref|ZP_01915983.1| hypothetical membrane associated protein [Limnobacter sp. MED105]
gi|149823557|gb|EDM82787.1| hypothetical membrane associated protein [Limnobacter sp. MED105]
Length = 301
Score = 65.7 bits (158), Expect = 6e-09, Method: Composition-based stats.
Identities = 24/267 (8%), Positives = 58/267 (21%), Gaps = 11/267 (4%)
Query: 4 ENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQ 63
+ GL +S++ H+ + N P + +L + + +
Sbjct: 45 KAGLTVSVLAHLTLVAFFVVGLNWNTEEPAAFEAVLWSEM-----PANEPIAVQQPKPDP 99
Query: 64 FKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPY 123
V + K+ + + + P
Sbjct: 100 VPEPEPPKPVVETPPPPKPVEPPKADIELPKPEPKKKPEPKPEPKKPEPKPEPKKPEPKP 159
Query: 124 DKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVR 183
+ +K ++ I K + + + S+ +R
Sbjct: 160 EPKKPEPKPEPKKPEPKIDPELAKKLRQEELARIMGGAPNTGSTSAGTSRNKAQYSDRIR 219
Query: 184 NRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAV 243
V + P + G ++ G +A+
Sbjct: 220 QYVRSKLVFPGADSVDGNPEAVFEVKQLPNGEIVSITQKKSSG-----LPAWDSAVERAL 274
Query: 244 IKSQAFRLSPSTYKSWRNITLFFVPSK 270
+S + + L F P
Sbjct: 275 QRSSPLPRAEDGSVEP-VLVLSFRPKD 300
>gi|189425857|ref|YP_001953034.1| TonB family protein [Geobacter lovleyi SZ]
gi|189422116|gb|ACD96514.1| TonB family protein [Geobacter lovleyi SZ]
Length = 282
Score = 65.7 bits (158), Expect = 6e-09, Method: Composition-based stats.
Identities = 40/266 (15%), Positives = 73/266 (27%), Gaps = 25/266 (9%)
Query: 7 LAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKG 66
L IS++LHV LYF + + IS I +D K ++PV + +
Sbjct: 9 LLISIVLHVAGFAALYF-WPKEQHQQISEP-----TFIDLQDVPELKTPPPQQPVPKARP 62
Query: 67 SSQENLVRDFSVQENGDRFSDQTKTHATENETKRSS------------SSKGEQALKESA 114
S Q V + + KT + S +K +A
Sbjct: 63 SDQRRRVARETAPRLATPVTPPAKTPPPRQSARAQSAGSPGRPGQTGAPAKPSEAGSSVN 122
Query: 115 LLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIP 174
L K Q S + ++ R ++ +
Sbjct: 123 ELLRRKPQQQAGTGGGGGTKPQPNLAPSASRMARLEENYRRRFADDIDDGTTRFLNTDDI 182
Query: 175 S-QDAIAIVRNRVIANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKINVDVVGGTELVR 232
+ V W P + + + N+ G ++ ++ G
Sbjct: 183 QFGSFLRRFETAVYGVWRYPQEAALKGIEGVTPVKITFNRNGEIVKVQLLESSGS----- 237
Query: 233 RMLRENARKAVIKSQAFRLSPSTYKS 258
R+L + + + P TY
Sbjct: 238 RILDDEVFRTLRLIGPMGSFPKTYGK 263
>gi|313673008|ref|YP_004051119.1| tonb family protein [Calditerrivibrio nitroreducens DSM 19672]
gi|312939764|gb|ADR18956.1| TonB family protein [Calditerrivibrio nitroreducens DSM 19672]
Length = 287
Score = 65.7 bits (158), Expect = 7e-09, Method: Composition-based stats.
Identities = 36/272 (13%), Positives = 83/272 (30%), Gaps = 28/272 (10%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPV 61
RL L IS ++H++FL Y + + VD I + ++ K+ ++ +
Sbjct: 3 RLNFFLVISFVVHLVFLY--YIKLPSKDDKQKKEP--IYVDVIKKVPKNQNQLKQPDKFL 58
Query: 62 VQFKGSSQENL----------------VRDFSVQENGDRFSDQTKTHATENETKRSSSSK 105
+ + E + + + K E + ++ +
Sbjct: 59 PKQQPKILEKPTYKKPSNRIIPDSFSKKETPIIPPIKEPEKNDNKNIVEEKKDEQHKITP 118
Query: 106 GEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEK--KSIDTVVVRPDKKELLS 163
+ + ++ K ++ +E+ K D + K++
Sbjct: 119 KDTPPTTNEEVKEIKPQEQSIKTAEKPPEEKRSLSKEQLSKILNPKDIINEIAKKEQKKE 178
Query: 164 KVEKSSRKRIPSQDAIAIVRNRVIANWNIPS-DFKRFKKLRVKMHFQLNQKGFVLGKINV 222
+R I + R+ W P+ R ++ V++ F + + G + V
Sbjct: 179 DEVDFNRFEIKYTSYFYKFKQRLYNVWRYPTDSAMRGEQGTVRIKFSILKDGTITNINIV 238
Query: 223 DVVGGTELVRRMLRENARKAVIKSQAFRLSPS 254
G L A +A+ L +
Sbjct: 239 SSSG-----YSQLDRAAVEALKNMGKVPLPEA 265
>gi|310816578|ref|YP_003964542.1| Possible TolA protein [Ketogulonicigenium vulgare Y25]
gi|308755313|gb|ADO43242.1| Possible TolA protein [Ketogulonicigenium vulgare Y25]
Length = 406
Score = 65.7 bits (158), Expect = 7e-09, Method: Composition-based stats.
Identities = 36/233 (15%), Positives = 69/233 (29%), Gaps = 9/233 (3%)
Query: 47 EDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKG 106
D + + Q ++Q + D + D +QT +T +
Sbjct: 172 ADRIAPEAAPAPPLQAQEAPTAQAAVSPDADTPDVADEAQEQTAPPEATTQTVTEADRPA 231
Query: 107 EQALKESALLRMPVSPYDKQ-KISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKV 165
P + + S + D ++ +
Sbjct: 232 AAPTNVPRPQSRPQRQAAAPTQSATPQTPPASEAAASTPAANNNDDILAALAAAQDTPSA 291
Query: 166 EKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKIN-VDV 224
S+ + S R V W + + V F+L+ G V+G +
Sbjct: 292 STSAPQVQMSGAEQDAFRIAVQGCWAVDPGAAAAQVTVVV-GFELDTSGRVIGNNVRMVS 350
Query: 225 VGGTELVRRMLRENARKAVIKSQ----AF--RLSPSTYKSWRNITLFFVPSKM 271
G+ + E AR+AV++ Q LS + S ++ + F PS+M
Sbjct: 351 SNGSGAAEQTAFEAARRAVLRCQGDGYPLSHPLSQAVLASGQSFEIEFDPSQM 403
>gi|289164846|ref|YP_003454984.1| TolA colicin import membrane protein [Legionella longbeachae
NSW150]
gi|288858019|emb|CBJ11879.1| TolA colicin import membrane protein [Legionella longbeachae
NSW150]
Length = 324
Score = 65.3 bits (157), Expect = 8e-09, Method: Composition-based stats.
Identities = 36/232 (15%), Positives = 86/232 (37%), Gaps = 13/232 (5%)
Query: 45 YNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSS 104
E + K+ ++ + +++ + R +E R + A E +
Sbjct: 97 QAEAARQQRIKEQQQLARLKEEANKIAIARKKQAEEEKKRLKQMAEQKALEAKRIEELKK 156
Query: 105 KGEQALKESALLRMPVSPYDKQKISKATN----KEQDLQGISFAEKKSIDTVVVRPDKKE 160
+ ++ +K+ L ++ +K+K+++ + + + + E K + +
Sbjct: 157 QKDELVKQQKLEAQKLAELNKKKLAEKEKAEKIQAEMEKKKAATEAKKQAEAEAAARQAQ 216
Query: 161 LLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKI 220
E+ +R A++ N + NW +P + L + +L G VL
Sbjct: 217 AAQNAERQARIAGEVDKYKALIVNAIGRNWILPENV--DSTLSSQFRIRLAPDGMVLEVS 274
Query: 221 NVDVVGGTELVRRMLRENARKAVIKSQAFRLS--PSTYKSWRNITLFFVPSK 270
G +L +A+ A+ K+ + P T+ +R+I+L P +
Sbjct: 275 LTRSSGD-----PLLDRSAQTAIYKASPLPVPTDPDTFNLFRDISLTVRPEQ 321
>gi|194337188|ref|YP_002018982.1| transcriptional regulator, Fis family [Pelodictyon
phaeoclathratiforme BU-1]
gi|194309665|gb|ACF44365.1| transcriptional regulator, Fis family [Pelodictyon
phaeoclathratiforme BU-1]
Length = 298
Score = 65.3 bits (157), Expect = 8e-09, Method: Composition-based stats.
Identities = 35/285 (12%), Positives = 79/285 (27%), Gaps = 29/285 (10%)
Query: 7 LAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKY----------KK 56
L + ++H M L + + + +++SV + S
Sbjct: 18 LVAAAVMHAMVFFLAVY-LQLWDAGRHVKLKIVSVSLVSLPGSGGSPQRSEGKGGSTEAP 76
Query: 57 IEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQAL------ 110
EP + +V++ ++ Q + + K +
Sbjct: 77 SAEPQINTPPPVVNKVVKEALPEKPQPPALKQVVVEPPKKISVEPLKPKVVEKPSDMSTA 136
Query: 111 --KESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKS 168
+ + + + S LQ ++K+ +
Sbjct: 137 LQRLKQNIEKKTAQLPQPSASALNKALATLQQKVSSDKQPLQGSGGGKPGSSGGRSGAGK 196
Query: 169 SRKRIPSQ-DAIAIVRNRVIANWNIP-SDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVG 226
+ A + + + NW K + V + + G + +I D
Sbjct: 197 GSGGGGTADPYKAEIASIIQRNWVFSGQMLKNSYGMSVYVRINIIADGTI-RQIIFDKRA 255
Query: 227 GTELVRRMLRENARKAVIKSQAFRLSPSTYKSWRN--ITLFFVPS 269
+E L + +KA+ KS + P + +R+ I F P
Sbjct: 256 PSE----YLNSSVKKALEKSSPLPVLP-KEEGFRDVWIGFVFTPE 295
>gi|326405386|ref|YP_004285468.1| hypothetical protein ACMV_32390 [Acidiphilium multivorum AIU301]
gi|325052248|dbj|BAJ82586.1| hypothetical protein ACMV_32390 [Acidiphilium multivorum AIU301]
Length = 320
Score = 65.3 bits (157), Expect = 8e-09, Method: Composition-based stats.
Identities = 35/317 (11%), Positives = 63/317 (19%), Gaps = 52/317 (16%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNI-YNEDYHSSKYKKIEEPV 61
L G +S I H+ +LLL + E + V + + K+ P
Sbjct: 5 LRRGAIVSGIAHLAIILLLVAVLPT-EKLNAPPSEAVDVTLVGNAAPQQALHKGKVAAPA 63
Query: 62 VQF---------------------------------------KGSSQENLVRDFSVQENG 82
+
Sbjct: 64 DTKVVHKAHLAVQKPKPQPKVAPPPPPPPPPPAPHAAPKLPQPPAPPPPPPPPTPAPTPI 123
Query: 83 DRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQ------ 136
+ + + K K ++ Q
Sbjct: 124 PTPPPPPPHPPQKQTPPKPAKKLPLPPKKTPPAPAEKSPTSQKHEVKTPVPMSQSVLNTL 183
Query: 137 -DLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSD 195
L+ + +K + S+ S + N V W I +
Sbjct: 184 AKLRALQKQKKPPTARYNPERGGAPNGGGTKMSTANSGLSASQRDAIGNEVRPCWGIDAG 243
Query: 196 FKRFKKLRVKMHFQLNQKGFVLGKIN--VDVVGGTELVRRMLRENARKAV--IKSQAFRL 251
+K V + + G V D ++ + A AV + L
Sbjct: 244 APGVQKFSVLLQVVTDAGGVVREARVAPADQGKMSDPLFAAFANRAVDAVKNYQCAKLPL 303
Query: 252 SPSTYKSWRNITLFFVP 268
S F P
Sbjct: 304 PSYMLGSVHTFIFRFTP 320
>gi|148261882|ref|YP_001236009.1| hypothetical protein Acry_2900 [Acidiphilium cryptum JF-5]
gi|146403563|gb|ABQ32090.1| Cell division and transport-associated protein TolA [Acidiphilium
cryptum JF-5]
Length = 320
Score = 65.3 bits (157), Expect = 8e-09, Method: Composition-based stats.
Identities = 35/317 (11%), Positives = 62/317 (19%), Gaps = 52/317 (16%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNI-YNEDYHSSKYKKIEEPV 61
L G +S I H+ +LLL + E + V + + K+ P
Sbjct: 5 LRRGAIVSGIAHLAIILLLVAVLPT-EKLNAPPSEAVDVTLVGNAAPQQALHKGKVAAPA 63
Query: 62 VQF---------------------------------------KGSSQENLVRDFSVQENG 82
Sbjct: 64 DTKVVHKAHLAVQKPKPQPKVAPPPPPPPPPPAPHAAPKLPQPPVPPPPPPPPTPAPTPI 123
Query: 83 DRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQ------ 136
+ + + K K ++ Q
Sbjct: 124 PTPPPPPPHPPQKQTPPKPAKKLPLPPKKTPPAPAEKSPTSQKHEVKTPVPMSQSVLNTL 183
Query: 137 -DLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSD 195
L+ + +K + S+ S + N V W I +
Sbjct: 184 AKLRALQKQKKPPTARYNPERGGAPNGGGTKMSTANSGLSASQRDAIGNEVRPCWGIDAG 243
Query: 196 FKRFKKLRVKMHFQLNQKGFVLGKIN--VDVVGGTELVRRMLRENARKAV--IKSQAFRL 251
+K V + + G V D ++ + A AV + L
Sbjct: 244 APGVQKFSVLLQVVTDAGGVVREARVAPADQGKMSDPLFAAFANRAVDAVKNYQCAKLPL 303
Query: 252 SPSTYKSWRNITLFFVP 268
S F P
Sbjct: 304 PSYMLGSVHTFIFRFTP 320
>gi|94501185|ref|ZP_01307707.1| formyltetrahydrofolate deformylase [Oceanobacter sp. RED65]
gi|94426612|gb|EAT11598.1| formyltetrahydrofolate deformylase [Oceanobacter sp. RED65]
Length = 260
Score = 65.3 bits (157), Expect = 8e-09, Method: Composition-based stats.
Identities = 26/263 (9%), Positives = 77/263 (29%), Gaps = 21/263 (7%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
+A+S +HV+ L + +V P + ++ ++ +VQ K
Sbjct: 8 TIAVSFAIHVLLYWLFMADLSVFFNTPAQTEQDRRIEI------------ALQPRMVQEK 55
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
+ + + ++ + S+ ++ E K + + ++ +
Sbjct: 56 DQPPPPQHLEDDLNKANNQDGTLETATKAASSAASSNLTQEEPEPKSTRSIEQVIAAAKR 115
Query: 126 QKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNR 185
+ ++ + Q+ + +S + + V R
Sbjct: 116 GQKIESLDSSQEQSRSEQVDLQSQGLESLSDQDLADNRVDSPLNSNEEEKARWFNEVLKR 175
Query: 186 VIANWNIPSDFKRFKKLRV--KMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAV 243
+ N + +N +G++ G L ++A +A+
Sbjct: 176 ITEQVNYVWVKPNNIDPSAWGIIRMDINSEGYLRSAWVHLPSGDAH-----LDQSALRAI 230
Query: 244 IKSQAFRLS--PSTYKSWRNITL 264
+ + P + +R++
Sbjct: 231 RSVMRYHIPQNPRLSRYYRHLEF 253
>gi|93005418|ref|YP_579855.1| TonB-like [Psychrobacter cryohalolentis K5]
gi|92393096|gb|ABE74371.1| TonB-like [Psychrobacter cryohalolentis K5]
Length = 323
Score = 65.3 bits (157), Expect = 8e-09, Method: Composition-based stats.
Identities = 26/271 (9%), Positives = 80/271 (29%), Gaps = 15/271 (5%)
Query: 1 MRLENGLAISMILHVMFLLLLYFNF---NVQLLVPISRREMLSVDNIYNEDYHSSKYKKI 57
+ L + I++ +H + + + F+ L+ +++ ++ + + ++ ++
Sbjct: 49 ISLPMAIVIAISVHALIIFGISFSMGQDPAGLMQDVAKALTDNMQPNEDAQFIANASQQG 108
Query: 58 EEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLR 117
V + + + Q + + + + + + S S
Sbjct: 109 GGTVKEQLRQETDQSSPLSAEQMSETQDVIRLQRQVRQQHYQESYLRTTLSWRHASVESD 168
Query: 118 MPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQD 177
+ + + + + T + + S D
Sbjct: 169 NDSKQAQDDMRVQEERLRKQIATLEAQLSQRQQTYATKSKVVTMDSNSTTHGAAA----D 224
Query: 178 AIAIVRNRVIANWNIPSDFKRFKK---LRVKMHFQLNQKGFVLGKINVDVVGGTELVRRM 234
I R V N+ + + V++ + G + ++ T +
Sbjct: 225 YINTFREHVERVGNLQYPAQARAQSITGEVRLMVIIANDGNIKAIRLLESSNST-----I 279
Query: 235 LRENARKAVIKSQAFRLSPSTYKSWRNITLF 265
L E A+++V ++ F + K + L
Sbjct: 280 LDEAAKQSVRQAAPFGKFTADMKDIVELRLI 310
>gi|88705610|ref|ZP_01103320.1| protein TolA [Congregibacter litoralis KT71]
gi|88700123|gb|EAQ97232.1| protein TolA [Congregibacter litoralis KT71]
Length = 256
Score = 65.3 bits (157), Expect = 9e-09, Method: Composition-based stats.
Identities = 27/198 (13%), Positives = 56/198 (28%), Gaps = 12/198 (6%)
Query: 79 QENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDL 138
+ K A + +A P + K +
Sbjct: 64 KPKKQVRKPAPKPVAKPAAKTAPKPANKTPTKTAAASSPPPKAASKPAVSKKPAPAPKVE 123
Query: 139 QGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKR 198
+ AE+ + + + + S A++R+ V+ W+ P +
Sbjct: 124 EKRISAEELAAISRRELAAAMAAEDSSQVAVTAEEMSTSYAALIRDTVVNYWSRPPSAR- 182
Query: 199 FKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFR----LSPS 254
+ + QL G ++ + G +A AV K+ +F L
Sbjct: 183 -NGMEALLAIQLVPTGEIVSVNVLRSSGSV-----AFDRSAINAVEKAGSFPELKNLPGR 236
Query: 255 TYKS-WRNITLFFVPSKM 271
++ +R L F P +
Sbjct: 237 EFEKTFRRFQLLFRPEDL 254
>gi|197106552|ref|YP_002131929.1| hypothetical protein PHZ_c3091 [Phenylobacterium zucineum HLK1]
gi|196479972|gb|ACG79500.1| conserved hypothetical protein [Phenylobacterium zucineum HLK1]
Length = 264
Score = 65.3 bits (157), Expect = 9e-09, Method: Composition-based stats.
Identities = 36/272 (13%), Positives = 81/272 (29%), Gaps = 18/272 (6%)
Query: 1 MRLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP 60
+ + S+ LH L ++ + L + + V + + D +
Sbjct: 4 IEVSPAAFGSLALHAGVAAALMISWGARDLKVGAVVPVTIVSSAPDLDTRPALQAP---- 59
Query: 61 VVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPV 120
+ + + E V D + + + + + +A A P
Sbjct: 60 --ETQEAMAETPVPDAAPTPEPPQPQPPPAPPQPQPAPTPKTPAPAAKAPAPKAARPTPK 117
Query: 121 SPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIA 180
+ + + S A K + + + +
Sbjct: 118 TKESSEDFFASLESSLAKSRPSPAAKGPSRAETAPDARNTAGRGLAAGADMQGLV----- 172
Query: 181 IVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGT-ELVRRMLRENA 239
+ WN + + + V++ F + G ++G++ + GG + V + E A
Sbjct: 173 ---QELQRRWNPNCTVEGGRDVIVRVVFNIGSGGQLVGQVTSQITGGPRDAVGQAAAERA 229
Query: 240 RKAVIKSQAFR-LSPSTYKSWRNITLFFVPSK 270
+AV + FR LS Y I + F +
Sbjct: 230 ERAVYAASPFRGLSRDYYGQ--RIAVNFNARE 259
>gi|110633788|ref|YP_673996.1| TonB family protein [Mesorhizobium sp. BNC1]
gi|110284772|gb|ABG62831.1| outer membrane transport energization protein TonB [Chelativorans
sp. BNC1]
Length = 292
Score = 64.9 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 23/240 (9%), Positives = 54/240 (22%), Gaps = 6/240 (2%)
Query: 16 MFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRD 75
++L F + + I EP
Sbjct: 41 GVIVLGNNVFADMSAMGEESEIVEPETEIPAAIVPPEPTVTAPEPAEPSPADIAVPAETT 100
Query: 76 FSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKE 135
+ + + A + K+ +
Sbjct: 101 EPLGPEEEVAMLPIPRPTPRPHYTPPKVEPRQGQPPRQAPSPRQQTEERKESPKRQATSR 160
Query: 136 QDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSD 195
+ ++ E + + + ++ + P +
Sbjct: 161 GSRGQNTQNARRGSSEGSRTASGTESQGPGRSRQTGNAATSNYPGKIVAKLRRSLRYPRE 220
Query: 196 FKRFK-KLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPS 254
+R + V++ F + Q G V G V G +L + A + V ++ F P+
Sbjct: 221 ARRQRLGGEVRVAFTVTQDGRVSGIRIVRSSGS-----PVLDQAALETVQRAAPFPKIPA 275
>gi|194333583|ref|YP_002015443.1| Fis family transcriptional regulator [Prosthecochloris aestuarii
DSM 271]
gi|194311401|gb|ACF45796.1| transcriptional regulator, Fis family [Prosthecochloris aestuarii
DSM 271]
Length = 285
Score = 64.9 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/275 (11%), Positives = 75/275 (27%), Gaps = 12/275 (4%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHS-----SKYKK 56
RL L I++ +H+ ++ + ++ P L D +
Sbjct: 13 RLIIALFIALCVHIAVFVVSIYVQRMKPPEPRVVTVSLVSLPGPGSDAAQELPGGAPVVD 72
Query: 57 IEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALL 116
V + E+ + V + + E +R + E+ +
Sbjct: 73 EALVVDNPEPEVSESAEPELVVMPEKPVIPIEPVKQEKKVEPERKAEKLPEKPENQLNDA 132
Query: 117 RMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQ 176
+ +K + + ++ R + P +
Sbjct: 133 LRALKDAVNEKQPTDLERTLARLKQKVDTQGPPSSLYNRQGGIGSGAGSGSYGAPLSPYE 192
Query: 177 DAIAIVRNRVIANWNIPSDFKRFKKL-RVKMHFQLNQKGFVLGKINVDVVGGTELVRRML 235
++ V + +W+ + R + + + + G V + +
Sbjct: 193 LYLSRVVTIITKSWSFSGELIREQGVVESYVALTIMPDGSVADLVFDRHSISS-----YF 247
Query: 236 RENARKAVIKSQAF-RLSPSTYKSWRNITLFFVPS 269
E +KA+ K+ + S I L F PS
Sbjct: 248 DETVKKAIEKASPLPPVPADVSLSALRIGLIFTPS 282
>gi|332286759|ref|YP_004418670.1| hypothetical protein PT7_3506 [Pusillimonas sp. T7-7]
gi|330430712|gb|AEC22046.1| hypothetical protein PT7_3506 [Pusillimonas sp. T7-7]
Length = 292
Score = 64.9 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/258 (12%), Positives = 76/258 (29%), Gaps = 16/258 (6%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
L L +S+ +H + L L + P +ML V + + KI
Sbjct: 18 LRIALVLSLAIHALLLTLRFVA----PQAPPPALDMLEVTLVNAHTETAPLQPKILAQNQ 73
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGE----QALKESALLRM 118
G + + +Q A + + + ++ A
Sbjct: 74 LHGGGEAQAGQAASPLPRTAAESPNQIVLAALRKRQQELEAEQQRLYTLLVSRQQAPPER 133
Query: 119 PVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDA 178
S ++ + + ++ + I A+ +I + + + + S++ +
Sbjct: 134 QQSELNEPALEQGEDELEQDSLILNAKISAIKERIEQYNAQPRRQFSGPSAQAVDY-AEY 192
Query: 179 IAIVRNRVIANWNIPSDFKRFKKL--RVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLR 236
+ R ++ + KL ++M + Q G + +L
Sbjct: 193 VEAWRKKIELLGTEHYPAEARGKLYGSLQMTVYIQQDGSLANVEITKPSSHA-----VLN 247
Query: 237 ENARKAVIKSQAFRLSPS 254
A + V + F P+
Sbjct: 248 LAAARIVQLAAPFAPLPA 265
>gi|256823066|ref|YP_003147029.1| protein TolA [Kangiella koreensis DSM 16069]
gi|256796605|gb|ACV27261.1| protein TolA [Kangiella koreensis DSM 16069]
Length = 304
Score = 64.5 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 37/304 (12%), Positives = 87/304 (28%), Gaps = 53/304 (17%)
Query: 7 LAISMILHVMFLLLLYFNFNVQLLVPIS---RREMLSVDNIYNEDYHSSKYKKIEEPVVQ 63
+ +S+ +HV+ + LL FNF V + ++ + ++ I++
Sbjct: 10 IVLSIAVHVIVIGLLVFNFAWDDEVDVKHEYVDAPINAKIVTAKELPKPDANAIKKQQEA 69
Query: 64 FKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPY 123
K +E + + ++ R + + E + ++ K+ A +
Sbjct: 70 EKKRLEEERKKQLAKEQEQKRLEAEKQRQLQEKVEQEKQEKLEQEKQKQLAAEKQKKLEE 129
Query: 124 DKQKISKATNKEQDLQGISF------------------------------------AEKK 147
+K+K + ++ + K
Sbjct: 130 EKKKEELEEQQRKEAEEKQRLEEEKRKKAEAERKRKEEEERKRKEAEAEQKRKEEELRKL 189
Query: 148 SIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMH 207
+ + + E + + + A++ ++ NW +
Sbjct: 190 EEEMAAMDDEFFEAQRDTVRRGQIMSEVEKLTALITAKIKRNWY-----PPKTSGACSIK 244
Query: 208 FQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLS--PSTYKSWRNITLF 265
+ G VL + E + A+ +S S P K R +T+
Sbjct: 245 ISMGPGGVVLQTEALGGDYD-------YCETGKTAITRSSPLPASDDPEVMKELREMTIV 297
Query: 266 FVPS 269
F PS
Sbjct: 298 FDPS 301
>gi|124268140|ref|YP_001022144.1| putative tolA-related transport transmembrane protein [Methylibium
petroleiphilum PM1]
gi|124260915|gb|ABM95909.1| putative tolA-related transport transmembrane protein [Methylibium
petroleiphilum PM1]
Length = 282
Score = 64.5 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 34/273 (12%), Positives = 78/273 (28%), Gaps = 13/273 (4%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
L +++I H + +L L + N + P L + + P
Sbjct: 17 LPRAAVLALIAHGLLVLALSLSVNWRRSEPAGVEAELWAAVPQIAAPRAVPPEPTPTPTP 76
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
K Q + + + + E +R + E AL++ R
Sbjct: 77 PPKPEPQAKAEPPPPPPNRDADIAREKREQKEKLEKQRLEEQRKEDALRKKKEQREQEEK 136
Query: 123 YDKQK-----ISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQD 177
+ K + + ++ +D V+ +++ PS
Sbjct: 137 AQAEADKREAEKKKKAEAERQAKQEAIRRQQLDRVMAEAAGTGAPGSTGTAAQSAGPSAS 196
Query: 178 AIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRE 237
++ R+ N + + + ++ G ++G+ V G E
Sbjct: 197 YAGRIKARIKPN--VVFGDEVDGNPLASVEVKVAPDGTIVGRRLVKSSG-----VPAWDE 249
Query: 238 NARKAVIKSQAFRLSPSTYKSWRNITLFFVPSK 270
+A+ K++ + + L F P
Sbjct: 250 AVLRAIDKTEVLPRDTDG-RVPSAMLLDFRPRD 281
>gi|71901736|ref|ZP_00683808.1| TolA protein [Xylella fastidiosa Ann-1]
gi|71728508|gb|EAO30667.1| TolA protein [Xylella fastidiosa Ann-1]
Length = 350
Score = 64.5 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/246 (10%), Positives = 74/246 (30%), Gaps = 12/246 (4%)
Query: 29 LLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQEN--LVRDFSVQENGDRFS 86
++ ++ D + + + + Q QE L + Q+ ++
Sbjct: 108 SPQTEAQERIIQPDKVDQKQVSALAESQEMAKREQEAKHRQEQIDLTEERKRQQQAEQKL 167
Query: 87 DQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEK 146
+ + ++ ++ K + L + + + + + A +
Sbjct: 168 RLARQQQEIMRKQVEEHAQIDRLKKLTELRKRREQLETQIQSDAKQADLAEQKLRQLAAE 227
Query: 147 KSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKM 206
+S + + + K+ + A ++ V W+ P + + +
Sbjct: 228 RSQQSSPSPVNNTNGVQGSGKNVDNKGLRDKYKAAIQQAVSGQWSRPPSVPLGQ--KCMI 285
Query: 207 HFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPSTYK--SWRNITL 264
H G VL + RR + AV+++Q ++ R++
Sbjct: 286 HITQLPGGRVLSAEVAPDCPYDDAGRR----SIESAVMRAQPL--PYRGFEPVFERDVYF 339
Query: 265 FFVPSK 270
F+P
Sbjct: 340 KFIPED 345
>gi|282600250|ref|ZP_05973585.2| putative periplasmic colicin Js sensitivity protein CjrB
[Providencia rustigianii DSM 4541]
gi|282566027|gb|EFB71562.1| putative periplasmic colicin Js sensitivity protein CjrB
[Providencia rustigianii DSM 4541]
Length = 268
Score = 64.5 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/249 (11%), Positives = 71/249 (28%), Gaps = 23/249 (9%)
Query: 7 LAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKG 66
L +++ LH+ + L +N + + ++ I +
Sbjct: 21 LILAIALHIAIVGLFIWNTHNARWDESLPAPSVVMELSIEAQAEKLTEVNIGQVQELSVA 80
Query: 67 SSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQ 126
S + + K K ++ ++ ++ +
Sbjct: 81 SESHQAQAEEVDLPALPKNDQAEVLVTQAVNKKPKPEVKKQKREQQPTEEKVQTTDSKAH 140
Query: 127 KISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRV 186
++ LQ A + + + +K+ A V ++
Sbjct: 141 DAPVTSDAAAPLQSHQIAAEFNSQSQSEDDARKQ-----------------WEAQVLGKL 183
Query: 187 IANWNIPSDFKRFKKL-RVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIK 245
P D R ++ + + F ++ +G +L + G R L A++ + +
Sbjct: 184 NKYKRYPEDAGRRSRVGKPVVIFTVDPQGILLDSELMTSSGT-----RSLDREAQQVLSR 238
Query: 246 SQAFRLSPS 254
+ L PS
Sbjct: 239 AAPLPLPPS 247
>gi|28198795|ref|NP_779109.1| TolA protein [Xylella fastidiosa Temecula1]
gi|182681494|ref|YP_001829654.1| protein TolA [Xylella fastidiosa M23]
gi|28056886|gb|AAO28758.1| TolA protein [Xylella fastidiosa Temecula1]
gi|182631604|gb|ACB92380.1| protein TolA [Xylella fastidiosa M23]
gi|307579948|gb|ADN63917.1| protein TolA [Xylella fastidiosa subsp. fastidiosa GB514]
Length = 346
Score = 64.5 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/246 (10%), Positives = 74/246 (30%), Gaps = 12/246 (4%)
Query: 29 LLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQEN--LVRDFSVQENGDRFS 86
++ ++ D + + + + Q QE L + Q+ ++
Sbjct: 108 SPQTEAQERIIQPDKVDQKQVSALAESQEMAKREQEAKHRQEQIDLTEERKRQQQAEQKL 167
Query: 87 DQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEK 146
+ + ++ ++ K + L + + + + + A +
Sbjct: 168 RLARQQQEIMRKQVEEHAQIDRLKKLTELRKRREQLETQIQSDAKQADLAEQKLRQLAAE 227
Query: 147 KSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKM 206
+S + + + K+ + A ++ V W+ P + + +
Sbjct: 228 RSQQSSPSPVNNTNGVQGSGKNVDNKGLRDKYKAAIQQAVSGQWSRPPSVPLGQ--KCMI 285
Query: 207 HFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPSTYK--SWRNITL 264
H G VL + RR + AV+++Q ++ R++
Sbjct: 286 HITQLPGGRVLSAEVAPDCPYDDAGRR----SIESAVMRAQPL--PYRGFEPVFERDVYF 339
Query: 265 FFVPSK 270
F+P
Sbjct: 340 KFIPED 345
>gi|89053464|ref|YP_508915.1| hypothetical protein Jann_0973 [Jannaschia sp. CCS1]
gi|88863013|gb|ABD53890.1| hypothetical protein Jann_0973 [Jannaschia sp. CCS1]
Length = 171
Score = 64.5 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 20/93 (21%), Positives = 39/93 (41%), Gaps = 4/93 (4%)
Query: 180 AIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDV--VGGTELVRRMLRE 237
A + + A W + + ++ + + + + F +G V+ + GGT++
Sbjct: 73 AQIAEAIEACWTVSNLSEQARGVSIVVAFDTIPEGEVVRESIEMTGFSGGTQVAADEAMA 132
Query: 238 NARKAVIKSQ--AFRLSPSTYKSWRNITLFFVP 268
A +A+ + L P TY W+ I L F P
Sbjct: 133 AAVRAITRCANDGLDLPPETYPVWQRIELTFDP 165
>gi|294649231|ref|ZP_06726669.1| TonB family protein [Acinetobacter haemolyticus ATCC 19194]
gi|292824898|gb|EFF83663.1| TonB family protein [Acinetobacter haemolyticus ATCC 19194]
Length = 303
Score = 64.5 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 33/272 (12%), Positives = 89/272 (32%), Gaps = 14/272 (5%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
+ I++++H + L F+ ++ +SV ++ H+ + ++
Sbjct: 33 AVVIAIMVHGLVLT-TQFSMPSPTDT-STKEIAVSVRPSQDKVEHADFLAQTDQQGSGEF 90
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
+ + ++ + + KR + + + + + K
Sbjct: 91 HQAHRMSSDMPTPMQSDATTGEHELESLETIQQKRELLFEEKVLMTVLSWQKQAEQNERK 150
Query: 126 QKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNR 185
+ + + ++ Q + + + +K+ + V+ K+ S + R +
Sbjct: 151 KALEELQSQFQAKAAMVASLEAQYLQRQQNFSRKQRIKTVDGIQAKQDASAAYLDKFRQK 210
Query: 186 VIANWNIPSDFKRFKK---LRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKA 242
V N ++ V++ LN +G + ++ G +L E AR +
Sbjct: 211 VELYGNRYYPDAAKQQRLAGEVRLMVILNAQGGIRAIRLIESSG-----HPILDEAARAS 265
Query: 243 VIKSQAFRLSPSTYKSWRNITLF----FVPSK 270
V + F S+ K + + F P
Sbjct: 266 VRRGAPFGAFDSSMKDISELRIIRTWRFDPVD 297
>gi|260549790|ref|ZP_05824006.1| TonB family protein [Acinetobacter sp. RUH2624]
gi|260407040|gb|EEX00517.1| TonB family protein [Acinetobacter sp. RUH2624]
Length = 305
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 31/272 (11%), Positives = 91/272 (33%), Gaps = 14/272 (5%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
+ ++++LH F+LL++F ++ +SV H+ + ++
Sbjct: 35 AIILAILLHT-FVLLIHFAMPAPSEQ-STKEIAISVRPTEEIVKHADFLAQADQQGSGTF 92
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
++ + + + +R + + + + + K
Sbjct: 93 RAAHRMSSNSPTPMPTDASTGEVQLDTLEKVRQQRELKFEEKVLMTVLSWQKQAEESQRK 152
Query: 126 QKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNR 185
+ + + ++ Q + + + +++ + V+ K+ S + R +
Sbjct: 153 KALEQLQSQFQAKAAMVASLEAQYLQRQQDFSRQQKIKTVDGIQAKKDASAAYLDKFREK 212
Query: 186 VIANWNIPSDFKRFKK---LRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKA 242
V N + ++ V++ LN +G + ++ G +L E A+ +
Sbjct: 213 VELYGNRYYPEEAKQQQLKGEVRLMVILNAQGGIRAIRLLESSG-----HPVLDEAAKAS 267
Query: 243 VIKSQAFRLSPSTYKSWRNITLF----FVPSK 270
V + F + K + + F P++
Sbjct: 268 VRRGAPFGRFDANMKDISELRIVRTWRFDPAE 299
>gi|325921970|ref|ZP_08183776.1| outer membrane transport energization protein TonB (TC 2.C.1.1.1)
[Xanthomonas gardneri ATCC 19865]
gi|325547548|gb|EGD18596.1| outer membrane transport energization protein TonB (TC 2.C.1.1.1)
[Xanthomonas gardneri ATCC 19865]
Length = 247
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 31/230 (13%), Positives = 62/230 (26%), Gaps = 17/230 (7%)
Query: 33 ISRREMLSVDNIYNEDYHSSKYKKIEEP------VVQFKGSSQENLVRDFSVQENGDRFS 86
+ + S + + + + Q SQ +V
Sbjct: 3 PTLDVIFSQTSTPLTPKQADFLAQANQQGGGNHATAQRPRDSQPGVVPQDRSGLAAQAQR 62
Query: 87 DQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEK 146
T +T+ +S +GEQ + + AE
Sbjct: 63 ATTVQAPEPTQTRVVASRRGEQTVPTPQPNPQTDPLTPAD---AQRVQRDAEMARLAAEV 119
Query: 147 KSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFK-KLRVK 205
+ ++ +S + + + R + N N P + +R + +V
Sbjct: 120 HLRSEQYAKRPNRKFVSASTREYAYANYLRAWVD--RAERVGNLNYPDEARRRRLGGKVV 177
Query: 206 MHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPST 255
+ + + G V + G L A + V +Q F PST
Sbjct: 178 ISVGVRRDGSVESSRVLISSGT-----PALDAAALRVVQLAQPFPPLPST 222
>gi|259418211|ref|ZP_05742129.1| TonB family protein [Silicibacter sp. TrichCH4B]
gi|259345606|gb|EEW57450.1| TonB family protein [Silicibacter sp. TrichCH4B]
Length = 274
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 23/256 (8%), Positives = 66/256 (25%), Gaps = 21/256 (8%)
Query: 9 ISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSS 68
+++ +HV +F V ++ E+P +
Sbjct: 13 LALAVHVAIFA----SFPQDGSEAGGAGGEYVVSIAGAAPTVREMVQQWEKPPETPQVQQ 68
Query: 69 QENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKI 128
+ + + + + A + P + +
Sbjct: 69 EVLDAPEMDTPPPPELAQLDNTPAPRAEVRLAMAEPQKVDAPEIDTETAPPPPEPEPEPE 128
Query: 129 SKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSS----------RKRIPSQDA 178
+ + ++ + + + S +S ++
Sbjct: 129 PEPEPEPEEAPETGQKAQNNSAGRTEQRAAGSGGSSQAGTSTSANTTLNKGQQAKLVAVW 188
Query: 179 IAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLREN 238
A +R+R+ PS + V + +++ G +L G + +
Sbjct: 189 GAKIRSRIERRKRYPSGGRG--DGSVVVRLTVSRDGQLLNYGIARSSG-----QAAFDQA 241
Query: 239 ARKAVIKSQAFRLSPS 254
A A+ ++ F +P+
Sbjct: 242 ALSAIKSARRFPKAPN 257
>gi|193212306|ref|YP_001998259.1| hypothetical protein Cpar_0639 [Chlorobaculum parvum NCIB 8327]
gi|193085783|gb|ACF11059.1| conserved hypothetical protein [Chlorobaculum parvum NCIB 8327]
Length = 299
Score = 64.2 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 27/236 (11%), Positives = 55/236 (23%), Gaps = 12/236 (5%)
Query: 38 MLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENE 97
+ + +S+ + V + ++
Sbjct: 68 SIPASPAEAPEAKASEAEPPAVKKVPEPSQPKPEPKVAKPATVKKIPEKTLVAKPPEQSP 127
Query: 98 TKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPD 157
K S + + L+ + S +N L + + S
Sbjct: 128 KKPEVSDERKNLQATLDKLKKSEAKQQGAASSGPSNLSSTLAKL-QKQVASEGGGTASSG 186
Query: 158 KKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDF-KRFKKLRVKMHFQLNQKGFV 216
S A + + NW+ + + + V + + G V
Sbjct: 187 SGSGAGGGRYGSGGGGAFDPYKAEIAGIIQDNWSFSNQMVRSTSGMEVYVFIYIMPDGSV 246
Query: 217 LGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPSTYKS---WRNITLFFVPS 269
L + R+A+ KS F P Y + W + F P
Sbjct: 247 SQTRYDRKSTS-----EYLNSSVRRALEKSAPFPPLPKEYGTKGLW--VGFVFTPQ 295
>gi|88800184|ref|ZP_01115752.1| TolA family protein [Reinekea sp. MED297]
gi|88777030|gb|EAR08237.1| TolA family protein [Reinekea sp. MED297]
Length = 289
Score = 64.2 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 21/259 (8%), Positives = 79/259 (30%), Gaps = 16/259 (6%)
Query: 24 NFNVQLLVPIS--RREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQEN 81
++++ + + + + + ++ +E+P + + +
Sbjct: 33 SWSLSFQRTVDFEIPDHIRAEIVRVDEVQPEPQPVVEQPAPKPTPKPEPKPEPAPKPEPK 92
Query: 82 GDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQG- 140
+ E + + + + + + + + Q
Sbjct: 93 PEPAPQPKPEPVPEPKPEPAPVEDTVDLSEATEPETPQEPVQEPPAETAPEQPAEPSQED 152
Query: 141 --ISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFK- 197
S E + + + E+ ++ + R + A + ++ W+ P + +
Sbjct: 153 LFESLLEGLAEEDEQINQQIAEIEQAQQRQAEVRQQVNNYQAAITEQIAQRWSRPVELRL 212
Query: 198 -RFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLS--PS 254
+L + +L G +L G + ++ +A+ + + F + +
Sbjct: 213 MDVSQLEASVLVELLPTGELLNVTLTRSSGNSN-----YDQSVLRAIERVRRFSVPDDAA 267
Query: 255 TYK--SWRNITLFFVPSKM 271
++ +R + + F P +
Sbjct: 268 VFEAGEFRRLNVTFRPEDL 286
>gi|299768715|ref|YP_003730741.1| hypothetical protein AOLE_02335 [Acinetobacter sp. DR1]
gi|298698803|gb|ADI89368.1| hypothetical protein AOLE_02335 [Acinetobacter sp. DR1]
Length = 294
Score = 64.2 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 31/273 (11%), Positives = 95/273 (34%), Gaps = 14/273 (5%)
Query: 5 NGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQF 64
++++LHV F+LL++F ++ +S+ + + + ++
Sbjct: 23 AATILAILLHV-FVLLIHFAMPSPSEQ-STKEIAISIRSSNEPVQQADFLAQADQQGSGT 80
Query: 65 KGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYD 124
+ + N + + + +R + + + + + +
Sbjct: 81 FREAHRTSSDTPNPMPNDASTGNAELESLQKVQQQRELKFEEKVLMTVLSWQKQADASQR 140
Query: 125 KQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRN 184
K+++ + ++ Q + + + +++ + V+ K+ S + R
Sbjct: 141 KKELEQLQSQFQAKAAMVASLEAQYLQRRQDFSRQQKIKTVDGIQAKKDASAAYLDKFRE 200
Query: 185 RVIANWNIPSDFKRFKK---LRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARK 241
+V N + ++ V++ LN +G + ++ G + +L E A+
Sbjct: 201 KVELYGNRYYPEEAKQQQLRGEVRLMVILNAQGGIRAIRLLESSGHS-----ILDEAAKS 255
Query: 242 AVIKSQAFRLSPSTYKSWRNITLF----FVPSK 270
+V + F + K + + F P++
Sbjct: 256 SVRRGAPFGHFDANMKDISELRIVRTWRFDPAQ 288
>gi|254499316|ref|ZP_05111988.1| TolA colicin import membrane protein [Legionella drancourtii
LLAP12]
gi|254351471|gb|EET10334.1| TolA colicin import membrane protein [Legionella drancourtii
LLAP12]
Length = 309
Score = 64.2 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/230 (13%), Positives = 76/230 (33%), Gaps = 9/230 (3%)
Query: 43 NIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSS 102
+ K + + + K + +E ++ + + E +
Sbjct: 84 LKEQQQLARLKEEANRIAIARKKQAEEEKKHLKQLAEQKAQEAKRIEELKKQKEELVKQQ 143
Query: 103 SSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELL 162
+ ++ + + + DK K +A ++ A+ ++ R +
Sbjct: 144 QLETKRLEDLNKKKIVEKAKADKLKAEQAAQAAKEHADKEKADLAKVEMERKRQAQAAAA 203
Query: 163 SKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINV 222
E+ +R A++ N + NW +P + L + +L G VL
Sbjct: 204 QNAEQQARIAGVVDKYKALIVNAIGRNWILPENV--DSTLSSQFRIRLAPDGAVLEVTLT 261
Query: 223 DVVGGTELVRRMLRENARKAVIKSQAFRLS--PSTYKSWRNITLFFVPSK 270
G +L +A+ A+ K+ + T+ +R+I+L P +
Sbjct: 262 RSSGD-----PLLDRSAQTAIYKASPLPVPTDADTFNMFRDISLTVRPEQ 306
>gi|302879291|ref|YP_003847855.1| TonB family protein [Gallionella capsiferriformans ES-2]
gi|302582080|gb|ADL56091.1| TonB family protein [Gallionella capsiferriformans ES-2]
Length = 282
Score = 64.2 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/257 (12%), Positives = 70/257 (27%), Gaps = 13/257 (5%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
+ + S+ +H L + + + L V + ++
Sbjct: 9 ISLAMMFSIAVHAFALFGVALVLP-EPNKASDIMQPLHVVLVNSKSQSKPLQADALAQAN 67
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQAL-KESALLRMPVS 121
G + + S+ N S +++ S+ K S +
Sbjct: 68 LDGGGNTTEDRQAKSMLPNIGEDSQIAPEQTSKSVAHLEEESRRMLTQMKSSYKMAPQQK 127
Query: 122 PYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAI 181
P D S A + Q I+ E + ++ R I
Sbjct: 128 PSDTAPGSSADDMVQRSMEIARLEAQINKNNDYYQKLPRRKFIGARTQEYRF--AQYIED 185
Query: 182 VRNRVIANWNIPSDFKRFKK---LRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLREN 238
R +V N+ + ++ ++++ + G + G R+L
Sbjct: 186 WRVKVERIGNLNYPEQARREQVYGKLQLSVSIRADGSIENIEVSRTSG-----HRILDAA 240
Query: 239 ARKAVIKSQAF-RLSPS 254
A + V + + L P
Sbjct: 241 AMRIVKLAGPYAPLPPD 257
>gi|114776329|ref|ZP_01451374.1| hypothetical protein SPV1_01377 [Mariprofundus ferrooxydans PV-1]
gi|114553159|gb|EAU55557.1| hypothetical protein SPV1_01377 [Mariprofundus ferrooxydans PV-1]
Length = 264
Score = 64.2 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/223 (13%), Positives = 67/223 (30%), Gaps = 7/223 (3%)
Query: 46 NEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSK 105
E + I + N + E + + + K K
Sbjct: 47 IEPLKRIEVMMISAKELAKLEQQAHNRPKHTKAAEVKPKPVIKKPKPKPVKKAKPVVKPK 106
Query: 106 GEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKV 165
K A + V P K +++ + + + + L+ +
Sbjct: 107 PVVKPKPVAKPKAVVKPAAKPHTKTIPKADKNFDPFAPVSSSTDRSATHAQTTRPELADL 166
Query: 166 EKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVV 225
+ IA+++ V +W +P+ F V+M L G + ++
Sbjct: 167 AGKQLSTSEKERYIALMQAAVQEHWKVPASSGTFTDPLVEMK--LLPNGDIASVKILESS 224
Query: 226 GGTELVRRMLRENARKAVIKSQAFRLSPSTYKSWRNITLFFVP 268
G +L + +A+ + F++ ++ +R L F P
Sbjct: 225 GSA-----LLDASLVRAIQAAAPFQVPAQQFEFFRVNNLRFHP 262
>gi|294678713|ref|YP_003579328.1| TolA protein [Rhodobacter capsulatus SB 1003]
gi|294477533|gb|ADE86921.1| TolA protein [Rhodobacter capsulatus SB 1003]
Length = 439
Score = 63.8 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 31/237 (13%), Positives = 69/237 (29%), Gaps = 12/237 (5%)
Query: 47 EDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKG 106
++ + E + K +E S + + + ET + +
Sbjct: 200 KEQAAPPEAATEIVPEEAKPVEEETTSAPKSSPRPPKKPAKPAVKPPEKIETAEAEDTPA 259
Query: 107 EQALKESALLRMPVSPYDKQKISKATNKEQDL--------QGISFAEKKSIDTVVVRPDK 158
E+ +++A K +
Sbjct: 260 EKPAEKAAEKPADKPAEKPAKPKSDKPAKPAKPAASKPAGADAVADALAEAMGAESDSGA 319
Query: 159 KELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGF--V 216
+ + + + V A WN+ + + V + + + G V
Sbjct: 320 DTGTGGLGIAKNGPPVTAGEKEALIVDVKACWNVGALSSEAMRTTVTVRVDMQENGKPVV 379
Query: 217 LGKINVDVVGGTELVRRMLRENARKAVIKSQA--FRLSPSTYKSWRNITLFFVPSKM 271
++ GG++ R E AR+A+++ + F L + W+ I + F P+KM
Sbjct: 380 SSIKMIEATGGSDAAARQAFEAARRAIVRCGSDGFPLPAEKFGWWQQIEIVFNPTKM 436
>gi|27380359|ref|NP_771888.1| hypothetical protein bll5248 [Bradyrhizobium japonicum USDA 110]
gi|27353523|dbj|BAC50513.1| bll5248 [Bradyrhizobium japonicum USDA 110]
Length = 326
Score = 63.8 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 25/214 (11%), Positives = 57/214 (26%), Gaps = 2/214 (0%)
Query: 58 EEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLR 117
EP + + Q Q + + + + +
Sbjct: 110 PEPEQPTQQKQPQPQPSQTPKQREATAQPQQPQQPQPQPSQLPPQQPLPQSQPQPAPQPS 169
Query: 118 MPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQD 177
V + + + V D K S +
Sbjct: 170 QAVPQPQAAPPAYQAPEPDVTVKYGVMLGLPPELPVEPKDAPRDDGGDAKDSIGAKLPPE 229
Query: 178 AIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRE 237
IA +R R+ + +P+ +R+K+ G + + + + +
Sbjct: 230 VIAELRRRLRSCAKLPAGVAPTDPVRIKLRAVFATDGTLARPPILIEAPPSAKGV-AIVK 288
Query: 238 NARKAVIKSQAFRL-SPSTYKSWRNITLFFVPSK 270
+A A+ Q +++ Y+ W+ + L F P
Sbjct: 289 SATSALQACQPYKMLPADKYEEWKVLDLPFTPQD 322
>gi|229846338|ref|ZP_04466446.1| TonB [Haemophilus influenzae 7P49H1]
gi|229810431|gb|EEP46149.1| TonB [Haemophilus influenzae 7P49H1]
Length = 264
Score = 63.8 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 34/257 (13%), Positives = 81/257 (31%), Gaps = 11/257 (4%)
Query: 12 ILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQEN 71
I+H + + + +N+N S + +S +I E ++ + +
Sbjct: 16 IVHGIVIGFILWNWNEPSDSANSAQGDIS-TSISMELLQGMVLEEPAPEPEDVQKEPEPE 74
Query: 72 LVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKA 131
E + + T E + + + + ++ K+ I+K
Sbjct: 75 PENVQKEPEPEKQEIVEDPTIKPEPKKIKEPEKEKPKPKEKPKNKPKKEVKPQKKPINKE 134
Query: 132 TNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWN 191
K + S T ++ +S + +R + ++
Sbjct: 135 LPKGDENIDSSANVNDKASTTSAANSNAQVAGSGTDTSEIAA----YRSAIRREIESHKR 190
Query: 192 IPSDFKR-FKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFR 250
P+ K K+ +V + F + G + G G L + A A+ S++
Sbjct: 191 YPTRAKIMRKQGKVSVSFNVGADGSLSGAKVTKSSGD-----ESLDKAALDAINVSRSVG 245
Query: 251 LSPSTYKSWRNITLFFV 267
P+ + S ++ + F
Sbjct: 246 TRPAGFPSSLSVQISFT 262
>gi|303328320|ref|ZP_07358758.1| protein TolA [Desulfovibrio sp. 3_1_syn3]
gi|302861650|gb|EFL84586.1| protein TolA [Desulfovibrio sp. 3_1_syn3]
Length = 320
Score = 63.8 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 42/326 (12%), Positives = 90/326 (27%), Gaps = 64/326 (19%)
Query: 1 MRLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREML--SVDNIYNEDYHSSK----- 53
MRL +S LH+ LL++F + V + ++ V+ + S
Sbjct: 1 MRL-ASYVLSFCLHLAAFLLIWF-WPSHPPVRLDTPPVMISLVEGAPGGNRTPSPILGHM 58
Query: 54 -------YKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKG 106
+ V++ + + + K E + +K
Sbjct: 59 GEPGDGPQAPTPPAPKNEIAAPAREEVKEPAPVPAPPKEAAPVKRPEPVKEPPKPIPAKE 118
Query: 107 EQALKESALLRMPVSPYDKQKISKATNK-----------------------EQDLQGISF 143
E +P ++ K K E +
Sbjct: 119 EATPVAKKKKDLPKKEEAPREEPKKQEKREEPKKADKPKKDEKPKKDGKTKEDPIAAALQ 178
Query: 144 AEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQD-----------------AIAIVRNRV 186
+K+ + + ++ RK ++ + V V
Sbjct: 179 KARKASSRADSGDRGNAIEQALAQAQRKAGGNRGGGGGEGDGPGGGGLGDVYMGQVMLAV 238
Query: 187 IANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKS 246
NW S + L + +++ +G VL G ++ +A AV+++
Sbjct: 239 RPNWGFASAGRV--NLSCVVRVKVDMQGKVLQAEISQSSGNSQ-----YDASAVNAVVRT 291
Query: 247 -QAFRLSPSTYKSWRNITLFFVPSKM 271
QA P + ++ L F ++
Sbjct: 292 GQAGEFPPPPSAEYSDLDLVFTFDEL 317
>gi|206889867|ref|YP_002249452.1| protein TonB, putative [Thermodesulfovibrio yellowstonii DSM 11347]
gi|206889958|ref|YP_002249402.1| protein TonB, putative [Thermodesulfovibrio yellowstonii DSM 11347]
gi|206741805|gb|ACI20862.1| protein TonB, putative [Thermodesulfovibrio yellowstonii DSM 11347]
gi|206741896|gb|ACI20953.1| protein TonB, putative [Thermodesulfovibrio yellowstonii DSM 11347]
Length = 249
Score = 63.8 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/258 (12%), Positives = 83/258 (32%), Gaps = 30/258 (11%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
++ L S I H++ L+ + S++ V I +
Sbjct: 1 MKKALIYSCIFHIL----LFIFMLLLQDYFKSQQPSEPVSIIIVPIAPQMPKMPPSVKAL 56
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
K + +R+ + + + + + +S+ + + L
Sbjct: 57 PPKTLEKLPPIRESKQPKYLSAIPKGNQGQKEDKQKETASTGNLKTEKHFTELTPKQSPN 116
Query: 123 -YDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAI 181
+DK I++ + K ++ ++ S+ S K +
Sbjct: 117 IFDKDVIARLSRKSKE-------------------KQELETSRGLSFSAKEFNDWGYLER 157
Query: 182 VRNRVIANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENAR 240
++ ++ W P + + + F +++KG ++ + G RML + A
Sbjct: 158 LKEKIERVWQYPPQAAQRGIYGDLYLRFTIDKKGKLVSVELLRTSG-----YRMLDDAAI 212
Query: 241 KAVIKSQAFRLSPSTYKS 258
KA+ ++ F P ++
Sbjct: 213 KALKDAEPFWPLPDDWQK 230
>gi|148244813|ref|YP_001219507.1| hypothetical protein COSY_0671 [Candidatus Vesicomyosocius okutanii
HA]
gi|146326640|dbj|BAF61783.1| conserved hypothetical protein [Candidatus Vesicomyosocius okutanii
HA]
Length = 279
Score = 63.8 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/258 (10%), Positives = 85/258 (32%), Gaps = 5/258 (1%)
Query: 9 ISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSS 68
+++ LHV+ + L ++ +L +P ++ + D + +K ++ +
Sbjct: 24 VAIALHVVLAIGLLYSNAQRLGIPKQTVKLDEIPKAMMIDLTEIEKEKQRLINIKQRREK 83
Query: 69 QENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKI 128
+ ++ + +R+ +Q + + + K+ +K +K R + +K++
Sbjct: 84 RLEELQRTEKKVENERYKEQQRLKQLKIKIKQEKKAKIIAEIKRKQAEREALKAENKKQE 143
Query: 129 SKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIA 188
+ + + E+ +++ + + + I + +RV
Sbjct: 144 IEKLRQVE--AKKFKKEQNKRFLKKEVQAEEDQDRLIAQEDILNELKFNYINQIASRVKE 201
Query: 189 NWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQA 248
W+ + + G V + + +++ +AV K+
Sbjct: 202 KWHYQGA---KDSWSCDVQILQDLDGQVKSVNLKSCNIDNIIKVQSFKDSIERAVYKASP 258
Query: 249 FRLSPSTYKSWRNITLFF 266
+P I F
Sbjct: 259 LPYAPDRSVFDAQILFHF 276
>gi|37526607|ref|NP_929951.1| hypothetical protein plu2717 [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|36786039|emb|CAE15091.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
TTO1]
Length = 266
Score = 63.8 bits (153), Expect = 3e-08, Method: Composition-based stats.
Identities = 27/253 (10%), Positives = 72/253 (28%), Gaps = 21/253 (8%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPV 61
+ GL ++ +H++ + + + + + ++ + K+ +
Sbjct: 13 HFKKGLVSAIAVHLILVGWIISQPEEIAVGELMPPPAVMMELSLLTEATHQVQKQPIG-L 71
Query: 62 VQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVS 121
Q + + + + + D+ K+ + + ++
Sbjct: 72 EQQLSVASRQQESEVNEIKTPELMKDEQAQILVHKPKKQKKHHEEIKKTPPVKRQQVEEQ 131
Query: 122 PYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAI 181
+K S A S + + S A
Sbjct: 132 ESEK--------------SQSSAAMASSTATSTNLTSRVAAAYDSDSKAVADADALWRAE 177
Query: 182 VRNRVIANWNIPSDFKRFKK-LRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENAR 240
V + P D +R + R + F ++++G+V V G L A+
Sbjct: 178 VVGHLNRYKRYPEDAQRRNRTGRPTVRFTIDKQGYVTNSDLVRRSGT-----HSLDREAK 232
Query: 241 KAVIKSQAFRLSP 253
+ + ++Q + P
Sbjct: 233 QILARAQPLPVPP 245
>gi|30248241|ref|NP_840311.1| hypothetical protein NE0217 [Nitrosomonas europaea ATCC 19718]
gi|30180126|emb|CAD84128.1| Proline-rich region [Nitrosomonas europaea ATCC 19718]
Length = 286
Score = 63.4 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 39/257 (15%), Positives = 75/257 (29%), Gaps = 26/257 (10%)
Query: 5 NGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQF 64
++++H FL LL F N + EM+SVD H + V+
Sbjct: 15 RAALFALLVHAAFLALLVFGLNWK----NEVSEMMSVDLWAELPRHPVEPPSSAAKVIPE 70
Query: 65 KGSSQENLVRDF--------SVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALL 116
+ + R D TE + K E KE
Sbjct: 71 PVKVKPQPQQKTQPQPQPVIKAAPPPVRKPDIALKDKTEKPQLKEEVKKPEPVKKEVPKK 130
Query: 117 RMPVSPYDKQKISKATNKEQDLQGISFAEKKSID-------TVVVRPDKKELLSKVEKSS 169
P +K + K + ++ + +K D + ++E + + +
Sbjct: 131 EPTKKPVEKLVPKEEVKKPEPVKKVEQKTEKKEDVRQQAEAQKQAQQREREAAAAKAERA 190
Query: 170 RKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTE 229
R + +++ ++ + +P D V+ L G VL G
Sbjct: 191 RADGEIEKYREMIKAKIRSRIIMPPDLPG--NPAVEFTVTLLPGGDVLTVTLRKSSG--- 245
Query: 230 LVRRMLRENARKAVIKS 246
E +A+ +
Sbjct: 246 --YTAFDEAVERAIYLA 260
>gi|332526640|ref|ZP_08402746.1| TonB family protein [Rubrivivax benzoatilyticus JA2]
gi|332110902|gb|EGJ11079.1| TonB family protein [Rubrivivax benzoatilyticus JA2]
Length = 286
Score = 63.4 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 31/249 (12%), Positives = 70/249 (28%), Gaps = 10/249 (4%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
L+ L +S+ LH + L + + + V L V + + + V
Sbjct: 11 LQAALLVSVGLHAVLLTVRFVDPEAFNRVFRDTP--LEVILVNARSNEAPTEAQAIAQVR 68
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
G + + A + A L +P
Sbjct: 69 LAGGGDADKGRATSPLPRTPQAQPGDAADDARRRIEDLQQQQQQLLAQLRRELAALPPPD 128
Query: 123 YDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIV 182
+ S + ++ + I+ + + + + ++R+ ++
Sbjct: 129 PQRDTGSPQEREREEHRRQLLQMLAEIEKRINEENARPRKRYISPATREE-VYALYYDLL 187
Query: 183 RNRVIANWNIPSDFKRFKKL--RVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENAR 240
R R+ + KL + M+ ++ G V+ V R+L + A
Sbjct: 188 RRRIEDRGTRNFPERNGVKLYGELVMNVTVDAAGRVVDTEIVRPSSS-----RVLDQQAM 242
Query: 241 KAVIKSQAF 249
V + F
Sbjct: 243 AIVRAAAPF 251
>gi|218510436|ref|ZP_03508314.1| putative membrane protein, transduces energy to outer membrane
receptors [Rhizobium etli Brasil 5]
Length = 427
Score = 63.4 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 27/219 (12%), Positives = 55/219 (25%), Gaps = 10/219 (4%)
Query: 35 RREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHAT 94
+ V + E + + + + + + + A
Sbjct: 204 VEPEILVSEVPAETAVAQPMSTVVPEEQKPFDKIPPAVQPSETPPVAVEPEEVKPVETAE 263
Query: 95 ENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVV 154
K A+ P +K++ K T + +
Sbjct: 264 VQPEPDVPEEVVTPKPKPKAVTEEKPKPVEKKRPPKKTAGSKGEAQQDSTRGVAEGNTSP 323
Query: 155 RPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKG 214
D + S + VR+R+ P + V + F +N G
Sbjct: 324 LSDHNSRTAGN-NSGIGTAAFANYDGKVRSRIRRAMRTPRSVEG----TVVVSFSVNGSG 378
Query: 215 FVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSP 253
+ V+ G E + A AV ++ F +P
Sbjct: 379 GLTSVRVVNGSGVPE-----IDRLAVDAVRRAAPFGPTP 412
>gi|291326926|ref|ZP_06126376.2| putative ferric siderophore transporter, periplasmic energy
transduction protein TonB [Providencia rettgeri DSM
1131]
gi|291312555|gb|EFE53008.1| putative ferric siderophore transporter, periplasmic energy
transduction protein TonB [Providencia rettgeri DSM
1131]
Length = 257
Score = 63.4 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 32/251 (12%), Positives = 69/251 (27%), Gaps = 29/251 (11%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
GL +S + H ++ F + +S+ + + + E K
Sbjct: 15 GLVLSCLFHGTLAIIFIGWFTSSIPKTGVLPPAISLQL----GVYQLEQQAEPEINHAPK 70
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
V E D+ + + L ++
Sbjct: 71 QHMTTREESLPEVVEKVDKLPETA-------------------IVDNGTLTKVSEKKRPP 111
Query: 126 QKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNR 185
+K K D ++ E + + +S Q + V R
Sbjct: 112 KKTIPQEKKVIDEAPVTTQESMVTSAPASGSESSSSANFSSNASAAVSGHQGWQSEVHQR 171
Query: 186 VIANWNIPSDFKRFKKLRVK-MHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVI 244
+ P R++ V + L+ +G V+ ++ G ++L + A +
Sbjct: 172 IAKTKRYPRAALRYRSTGVSHIKVVLDSRGEVIAASLLNSSGT-----KILDKEALATIS 226
Query: 245 KSQAFRLSPST 255
++ F P T
Sbjct: 227 RAAPFPTPPET 237
>gi|257453982|ref|ZP_05619258.1| periplasmic protein TonB [Enhydrobacter aerosaccus SK60]
gi|257448647|gb|EEV23614.1| periplasmic protein TonB [Enhydrobacter aerosaccus SK60]
Length = 304
Score = 63.4 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 31/270 (11%), Positives = 79/270 (29%), Gaps = 17/270 (6%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
+ + ++ +H + + F + V + E+ ++
Sbjct: 27 MLFAIITAVTIHAAVIFGIQF-----EDKSSPTAAVQEVTTVLTENLQKNEKADFIANAG 81
Query: 63 QFKGSSQENLV--RDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPV 120
Q G + + ++ D ++T ++ R + + + ++
Sbjct: 82 QQGGGESNEKLRLENNTISPLQDEAINETDDIVSQERQTRQQAFQESYLRTTLSFEKIRR 141
Query: 121 SPYDKQKISKATNKEQDL--QGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDA 178
+K++ Q+ Q + I + KK + + +S +
Sbjct: 142 ENNNKKQDDSENLAAQEQRVQAQIATLETKISSNRQLLAKKSAVKTISSNSTTTGEAARY 201
Query: 179 IAIVRNRVIANWNIPSDFKRFKKLR---VKMHFQLNQKGFVLGKINVDVVGGTELVRRML 235
I R + N + K V + + G V + G T +L
Sbjct: 202 IENFRQQAYHIGNQQYPQEARAKGIKGDVMLMVIIEPNGQVKSIKVLQSSGAT-----IL 256
Query: 236 RENARKAVIKSQAFRLSPSTYKSWRNITLF 265
E A+ +V K+ F + + + +
Sbjct: 257 DEAAKNSVRKAAPFGKFSKQMQDYLELRII 286
>gi|212710858|ref|ZP_03318986.1| hypothetical protein PROVALCAL_01926 [Providencia alcalifaciens DSM
30120]
gi|212686555|gb|EEB46083.1| hypothetical protein PROVALCAL_01926 [Providencia alcalifaciens DSM
30120]
Length = 269
Score = 63.4 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 28/255 (10%), Positives = 84/255 (32%), Gaps = 24/255 (9%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPV 61
++ LA++++LHV + + + + + + ++ E +
Sbjct: 18 KMGGWLALAVVLHVAIVGIFIWTTHNERWEDSLPPPSVVMEL-SIEAQAKQLTEVNIGKT 76
Query: 62 VQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVS 121
+ +S+ + + ++Q + + E K++ +Q ++ + ++ +
Sbjct: 77 QELAVASESHKAPSEDIAIPALPVNEQAEVQLIKAEAKKTKPEPKKQKQEQKQVKKVQTT 136
Query: 122 PYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAI 181
++ + A + +S + AI
Sbjct: 137 DSKASDAPATSDAAAPILSQKIAAE-----------------LNSQSDANDSLQKQWEAI 179
Query: 182 VRNRVIANWNIPSDFKRFKKL-RVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENAR 240
V ++ P D + ++ + + F ++ +GF+L V G R L + A
Sbjct: 180 VLGKLNKYKRYPEDASKRNRIGKPVVMFTVDSQGFLLDSSLVGSSGT-----RSLDKEAL 234
Query: 241 KAVIKSQAFRLSPST 255
+ + ++ P+
Sbjct: 235 QVLSRAAPLPEPPTK 249
>gi|322435208|ref|YP_004217420.1| TonB family protein [Acidobacterium sp. MP5ACTX9]
gi|321162935|gb|ADW68640.1| TonB family protein [Acidobacterium sp. MP5ACTX9]
Length = 287
Score = 63.0 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 26/267 (9%), Positives = 69/267 (25%), Gaps = 11/267 (4%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
G A+++ +H + L+ ++ E +I + +P+ +
Sbjct: 23 GFALALGVHAGIIALVIGYAYLRPSTKRWGDESPIAGSIQASMVTALPLPPRPKPIEESV 82
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
++++ + + + + E V+ +
Sbjct: 83 LATEKPSIAPTPPPPTPIPPKAKAEPVKPKAEPPPKPKEVLIPTKATPPKPTPKVAERET 142
Query: 126 QKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVR-- 183
+ + ++ T + + + + +R +R
Sbjct: 143 PEPPRRAPATPPPPTPKATTGETSATAIPQSTTQLKNGTSAITVEERSFGNRYAYYIRLI 202
Query: 184 -NRVIANW---NIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENA 239
+V W D + R + F +N+ G G + L A
Sbjct: 203 SQKVNEQWLQQQQQVDARSSNGKRATITFTINRDGTPTEARVNTRSGSSS-----LDAAA 257
Query: 240 RKAVIKSQAFRLSPSTYKSWRNITLFF 266
+A+ F P + + F
Sbjct: 258 LRAIQSVDGFGPLPQGDHISVDFSFDF 284
>gi|293603261|ref|ZP_06685692.1| siderophore-mediated iron transport protein TonB [Achromobacter
piechaudii ATCC 43553]
gi|292818350|gb|EFF77400.1| siderophore-mediated iron transport protein TonB [Achromobacter
piechaudii ATCC 43553]
Length = 285
Score = 63.0 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 27/249 (10%), Positives = 78/249 (31%), Gaps = 17/249 (6%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
L G+AIS+++H L F P++ E++ + + + +
Sbjct: 12 LRIGIAISLLVHAGALAW-RFGVPALTRPPVTSLEVV---LLNARSETPPEAPRAQAQNQ 67
Query: 63 QFKGSSQENLVRDFSVQENGDRFS----DQTKTHATENETKRSSSSKGEQALKESALLRM 118
G + + + + + G + + + E +++ ++ +++ R
Sbjct: 68 MTGGGNADRGMTTTPLPQTGAAAETIVLEAMRRRQVQLEAEQTRLMTQLRSAQKAGTERQ 127
Query: 119 PVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDA 178
V+P+ + +D + + + V+ E + S +
Sbjct: 128 AVNPWP--DGADLGQDAEDQASVIQNSQVAALAARVQQYSNEPRKQFVAPSAEASRYAAY 185
Query: 179 IAIVRNRVIANWNIPSDFKRFKKL--RVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLR 236
+ R R+ + ++ +++ + G + +L
Sbjct: 186 LDAWRARIETVGTQHYPEEARGRIYGSLRITVSVRADGSIANVEIDQPSPHA-----VLN 240
Query: 237 ENARKAVIK 245
+ AR+ V
Sbjct: 241 QAARRIVQL 249
>gi|262370523|ref|ZP_06063848.1| TonB family protein [Acinetobacter johnsonii SH046]
gi|262314323|gb|EEY95365.1| TonB family protein [Acinetobacter johnsonii SH046]
Length = 303
Score = 63.0 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 33/275 (12%), Positives = 91/275 (33%), Gaps = 17/275 (6%)
Query: 4 ENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYH-SSKYKKIEEPVV 62
+ +++ LH++ L L + + + ++V ++ ++ + +
Sbjct: 32 TATVVLAVFLHLVILTLQF----AMPQENDAAVKEIAVTLRPSDKKIENADFLAQADQQG 87
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
+ D +Q + + + KR + + + + + +
Sbjct: 88 SGTFRESHRMSSDMPAPMLEQSTGEQQRETLEQIQQKRELNFEEKLLMTTLSWQKQAEDN 147
Query: 123 YDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIV 182
K+ + + ++ Q + + + +++ + V+ K+ S +
Sbjct: 148 QRKKAMEEMNSQFQAKAAMVASLEAQYLQRQQNFSRQQKIKTVDGIQAKQDISAAYLEKF 207
Query: 183 RNRVIANWNIPSDFKRFKK---LRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENA 239
R +V N ++ V++ LN G + +D G ML E A
Sbjct: 208 RQKVEFYGNRYYPEAAKQQRLAGEVRLMVILNGSGGIRAIRLIDSSG-----HEMLDEAA 262
Query: 240 RKAVIKSQAFRLSPSTYKSWRNITLF----FVPSK 270
+ +V K+ F + K + + F P++
Sbjct: 263 KASVRKAAPFGGFDAKMKDISELRIVRTWRFDPAE 297
>gi|152980914|ref|YP_001354653.1| hypothetical protein mma_2963 [Janthinobacterium sp. Marseille]
gi|151280991|gb|ABR89401.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille]
Length = 304
Score = 63.0 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 40/287 (13%), Positives = 77/287 (26%), Gaps = 34/287 (11%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
L + IS++ H L + + P L V + +
Sbjct: 18 LSAAVTISVLAHAALLAVHFTPPEAFKFKPTD--PGLEVILVNAKHDKQPLKADALAQAN 75
Query: 63 Q----------FKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKE 112
K + + R + + + K
Sbjct: 76 LDGGGNADAGRAKSPLPDLRKSEDGDSAKAARRKIEELERHQQKLLAQMEKKTAVHTPKV 135
Query: 113 SALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKR 172
S + + P + + + + L +SI+ RP K ++ +
Sbjct: 136 SDVEPVKDLPPQRNAV-DMLDSAKALLRREAEISRSIEEYNKRPKKTQVTPSTREVGYAA 194
Query: 173 IPSQDAIAIVRNRVIANWNIPSDFKRFKKL--RVKMHFQLNQKGFV---LGKINVDVVGG 227
+++R+ N + K KKL ++ ++ + Q G + G V+ G
Sbjct: 195 -----YYKALQDRIEKNGTLNFPQKDGKKLYGQLVVYIPIFQDGTIYMKEGGPRVERTSG 249
Query: 228 TELVRRMLRENARKAVIKSQAFRLSPS------TYKSWRNIT-LFFV 267
L + A V +S F P W IT F
Sbjct: 250 N----PALDQAALNIVRRSAPFGKFPENMRSVGKDDVWEIITRFNFT 292
>gi|330812355|ref|YP_004356817.1| hypothetical protein PSEBR_a5312 [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327380463|gb|AEA71813.1| Conserved hypothetical protein [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
Length = 283
Score = 63.0 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 28/235 (11%), Positives = 70/235 (29%), Gaps = 14/235 (5%)
Query: 24 NFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENG- 82
+ P + L + + K Q + E + +
Sbjct: 24 GVGFATVEPKQISQTLEITLATFKSETKPKKADFLAQENQQGSGTLEKKAIPKTTEIAPF 83
Query: 83 -----DRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQD 137
+ + ET ++ + A ++ V P K K + T
Sbjct: 84 QDNTVQKVTPPPAAKPEVQETAPKAAVTTVAPKPKKAPVKEEVKPDPKPKAPEPTFDSSQ 143
Query: 138 LQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFK 197
L + + + K+ + ++ +S R R +V N+ +
Sbjct: 144 LSSDIASLEAELAQEQQLYAKRPRIHRLSAASTMRDKGAWYKDEWRKKVERIGNLNYPDE 203
Query: 198 RFKK---LRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAF 249
+K +++ +N+ G + + ++ G + +L + A++ V + F
Sbjct: 204 ARRKQIYGNLRLMVSINRDGSLYEVLVLESSG-----QPLLDQAAQRIVRLAAPF 253
>gi|253989302|ref|YP_003040658.1| hypothetical protein PAU_01822 [Photorhabdus asymbiotica subsp.
asymbiotica ATCC 43949]
gi|253780752|emb|CAQ83914.1| conserved hypothetical protein [Photorhabdus asymbiotica]
Length = 266
Score = 63.0 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 33/256 (12%), Positives = 72/256 (28%), Gaps = 25/256 (9%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPV 61
+ GL ++ H+++ + + + + + ++ + K+
Sbjct: 13 HFKKGLVFAIAAHLIWAGWIIYQPKEISVNELMSPPAVMMELSLLTEAIHQVQKQPIGIE 72
Query: 62 VQ--FKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMP 119
Q QE+ + + E Q H + + K K +K +
Sbjct: 73 QQLSVASRQQESAINEIKAPELIKDEQAQILVHKPKKQKKNHEEFKKTPPVKRQQVEEQE 132
Query: 120 VSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAI 179
+ S A S + S S+
Sbjct: 133 SE-----------------KSQSSAASVSSTATSANLTSRVAASYDSDSNAVVDADAAWR 175
Query: 180 AIVRNRVIANWNIPSDFKRFKK-LRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLREN 238
A V + P D +R + R + F ++++G+V V G L
Sbjct: 176 AEVIGHLNRYKRYPEDAQRRNRTGRPTVRFTIDKQGYVTDSDLVRRSGT-----HSLDRE 230
Query: 239 ARKAVIKSQAFRLSPS 254
A++ + ++Q P
Sbjct: 231 AKQVLTRAQPLPAPPD 246
>gi|254516704|ref|ZP_05128763.1| LytB protein [gamma proteobacterium NOR5-3]
gi|219675127|gb|EED31494.1| LytB protein [gamma proteobacterium NOR5-3]
Length = 255
Score = 63.0 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 24/226 (10%), Positives = 63/226 (27%), Gaps = 15/226 (6%)
Query: 51 SSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQAL 110
S + ++ ++ + + + +++ A
Sbjct: 38 SDPRTIEARVLPPTAINATLIDAASLKPKKEVRKQAPKPAAKKAAKPVRKAPVKTAATAS 97
Query: 111 KESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSR 170
++ + K K ++ S + ++ +
Sbjct: 98 TKAPPKPVAQPSKAPAVTPKVEPKVEERISAEELAAISRRELAAAMAAEDSTQ---VAVT 154
Query: 171 KRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTEL 230
+ A++R+ V+ W+ P + + + QL G ++ + G
Sbjct: 155 AEEMATSYAALIRDTVVNYWSRPPSAR--NGMEALLAIQLVPTGEIVSVSVLRSSGSV-- 210
Query: 231 VRRMLRENARKAVIKSQAFR----LSPSTYKS-WRNITLFFVPSKM 271
+A AV K+ +F L ++ +R L F P +
Sbjct: 211 ---AFDRSAINAVEKAGSFPELKNLPGREFEKTFRRFQLLFRPEDL 253
>gi|68248858|ref|YP_247970.1| TonB [Haemophilus influenzae 86-028NP]
gi|68057057|gb|AAX87310.1| TonB [Haemophilus influenzae 86-028NP]
Length = 264
Score = 63.0 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 34/257 (13%), Positives = 80/257 (31%), Gaps = 11/257 (4%)
Query: 12 ILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQEN 71
I H + + + +N+N S + +S +I E ++ + +
Sbjct: 16 IAHGIIIGFILWNWNEPSDSANSAQGDIS-TSISMELLQGMVLEEPAPEPEDVQKEPEPE 74
Query: 72 LVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKA 131
E + + T E + + + + ++ K+ I+K
Sbjct: 75 PENVQKEPEPEKQEIVEDPTIKPEPKKIKEPEKEKPKPKEKPKNKPKKEVKPQKKPINKE 134
Query: 132 TNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWN 191
K + S T ++ +S + +R + ++
Sbjct: 135 LPKGDENIDSSANVNDKASTTSAANSNAQVAGSGTDTSEIAA----YRSAIRREIESHKR 190
Query: 192 IPSDFKR-FKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFR 250
P+ K K+ +V + F + G + G G L + A A+ S++
Sbjct: 191 YPTRAKIMRKQGKVSVSFNVGADGSLSGAKVTKSSGD-----ESLDKAALDAINVSRSVG 245
Query: 251 LSPSTYKSWRNITLFFV 267
P+ + S ++ + F
Sbjct: 246 TRPAGFPSSLSVQISFT 262
>gi|262280177|ref|ZP_06057961.1| conserved hypothetical protein [Acinetobacter calcoaceticus
RUH2202]
gi|262257955|gb|EEY76689.1| conserved hypothetical protein [Acinetobacter calcoaceticus
RUH2202]
Length = 305
Score = 63.0 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 31/273 (11%), Positives = 94/273 (34%), Gaps = 14/273 (5%)
Query: 5 NGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQF 64
++++LH +F+LL++F ++ +S+ + + + ++
Sbjct: 34 AATILAILLH-IFVLLIHFAMPSPSEQ-STKEIAISIRSSNEPVQQADFLAQADQQGSGA 91
Query: 65 KGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYD 124
+ + N D + + +R + + + + + +
Sbjct: 92 FREAHRTSSDTPNPMSNDASTGDAQLETLQKVQQQRELKFEEKVLMTVLSWQKQADASQR 151
Query: 125 KQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRN 184
K+++ + ++ Q + + + +++ + V+ K+ S + R
Sbjct: 152 KKELEQLQSQFQAKAAMVASLEAQYLQRRQDFSRQQKIKTVDGIQAKKDASAAYLDKFRE 211
Query: 185 RVIANWNIPSDFKRFKK---LRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARK 241
+V N + + V++ LN +G + ++ G + +L E A+
Sbjct: 212 KVELYGNRYYPEEAKLQQLKGEVRLMVILNAQGGIRAIRLLESSGHS-----VLDEAAKS 266
Query: 242 AVIKSQAFRLSPSTYKSWRNITLF----FVPSK 270
+V + F + K + + F P++
Sbjct: 267 SVRRGAPFGHFDTNMKDISELRIVRTWRFDPAQ 299
>gi|323497267|ref|ZP_08102286.1| protein TonB [Vibrio sinaloensis DSM 21326]
gi|323317624|gb|EGA70616.1| protein TonB [Vibrio sinaloensis DSM 21326]
Length = 280
Score = 63.0 bits (151), Expect = 5e-08, Method: Composition-based stats.
Identities = 32/251 (12%), Positives = 75/251 (29%), Gaps = 9/251 (3%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
+A S LH++ +++ + + P + + +
Sbjct: 22 AIAASFSLHLLAVVVYMWTPSYDFAPPPQAAPIAVSIVAPLATSKNKLDAENVGQEQHEV 81
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
+ V E + + + K+ A+ P
Sbjct: 82 IQKAAHKPIIEPVIETPAKPVVPVVESPKPAPIVLPAKPNKKLIDKKPAVKPQPKPKTVT 141
Query: 126 QKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNR 185
+ + + ++Q +Q K + + L + + S + + + +
Sbjct: 142 KDVEPSAEQKQIIQQAQAQPKLKTSNIANQQ---SALRQGQLSEQGKAANVSWKQALHAH 198
Query: 186 VIANWNIPSDFKR-FKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVI 244
+ P KR K+ + F +N++G VL + V G + L + A V
Sbjct: 199 LEREKRYPRKAKRLKKQGMPVIRFTMNRQGKVLNVVLVKSSGTSS-----LDKEAVDLVY 253
Query: 245 KSQAFRLSPST 255
++Q P+T
Sbjct: 254 RAQPLIKPPNT 264
>gi|119504263|ref|ZP_01626343.1| LytB protein [marine gamma proteobacterium HTCC2080]
gi|119459771|gb|EAW40866.1| LytB protein [marine gamma proteobacterium HTCC2080]
Length = 249
Score = 63.0 bits (151), Expect = 5e-08, Method: Composition-based stats.
Identities = 33/272 (12%), Positives = 79/272 (29%), Gaps = 46/272 (16%)
Query: 7 LAISMILHVMFLLLLYFNF--NVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQF 64
+ +++ LH++ LL + V + ++ + + K +
Sbjct: 15 VVLTLALHLVVAGLLMVRWANPVTIEARAPAPVAINATLVSADTLKPKPKPKPKP----- 69
Query: 65 KGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYD 124
+ K + + + + V+P
Sbjct: 70 -----------------------KPKPKPKPKPKPKPKPKPKPKPQATTEPIPAAVTPEQ 106
Query: 125 KQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRN 184
K + + + +++++ + ++L K S A+++
Sbjct: 107 KVEPEVPFETAKPERTPEQLSQETLNDIESVLASEQLSQKGSVG----TVSDQVAAVIKQ 162
Query: 185 RVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVI 244
VI W P + + + L G V+G ++ G T +A A+
Sbjct: 163 AVIGRWTRPPSAR--NNMVAILEIALVPTGDVVGVTVLESSGNT-----AFDSSAVNAIE 215
Query: 245 KSQAFR----LSPSTYKS-WRNITLFFVPSKM 271
K F L + ++ +R L F P +
Sbjct: 216 KVARFSEVKSLDRAVFERDFRRFQLIFRPEDL 247
>gi|299138487|ref|ZP_07031666.1| TonB family protein [Acidobacterium sp. MP5ACTX8]
gi|298599733|gb|EFI55892.1| TonB family protein [Acidobacterium sp. MP5ACTX8]
Length = 264
Score = 62.6 bits (150), Expect = 5e-08, Method: Composition-based stats.
Identities = 34/258 (13%), Positives = 67/258 (25%), Gaps = 23/258 (8%)
Query: 2 RLENGLAISMILHVMFL-LLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP 60
R +GLA +++LH+ + L + P SV I + P
Sbjct: 14 RFGSGLAGAIVLHLALIGGLAAVAVFEHVHAPNWGENTASVGAIQASMVSAIPLPPKAAP 73
Query: 61 VVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPV 120
V +S++ + + + + +T K
Sbjct: 74 VKDSVLASEDVTPTPKPPPKEATQPPPKPTDVLIKAKTPAKVIPKVAPIETPVPPKHPQP 133
Query: 121 SPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIA 180
+P + + + + V K + ++ +
Sbjct: 134 APVTPK--------------AASGDAATQLPQSVSQLKNGTAALTVQNRVFGNRYAYYLR 179
Query: 181 IVRNRVIANWNIPSDFKRFK---KLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRE 237
IV N V ++ S V + F + + G V G + L
Sbjct: 180 IVANAVNQSYATYSGQADPNASMNKSVTVLFDIQRDGSVANLHVETRSGSS-----TLDT 234
Query: 238 NARKAVIKSQAFRLSPST 255
A +A+ F P
Sbjct: 235 AALRAIQHLDNFPQLPEG 252
>gi|317153132|ref|YP_004121180.1| protein TolA [Desulfovibrio aespoeensis Aspo-2]
gi|316943383|gb|ADU62434.1| protein TolA [Desulfovibrio aespoeensis Aspo-2]
Length = 317
Score = 62.6 bits (150), Expect = 5e-08, Method: Composition-based stats.
Identities = 35/323 (10%), Positives = 79/323 (24%), Gaps = 60/323 (18%)
Query: 1 MRLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP 60
MR +S +LH FL F Q + R + SVD +
Sbjct: 1 MRQSFWFTLSFVLHASFLAFALFWAGGQSVRVNMDRPVYSVDLVTLAPPPGLAPVVEASG 60
Query: 61 VVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATEN------------------ETKRSS 102
+ + V + + + E +
Sbjct: 61 KPEAATAEAPVPVVEAASGPVAEIKPVPVVEAKPEPKPEPKPEPKPEPKPEPEVKDISPK 120
Query: 103 SSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELL 162
+ + KE P + + K K+ Q ++ + + +E
Sbjct: 121 KVEKQPIKKEEPPKPKPAPKPEPKPEPKPEPKKTTEQMLAEGLAAAKAETKAKAGAQEKQ 180
Query: 163 SKVEKSSRKRIPSQDAIAIVRNR----------------------------------VIA 188
+S + V +
Sbjct: 181 KSAAIASELAALKKREGDQVYAHGGQRGGQEGGIEGGVVGGTGSGLSEVYALIVGTAIKK 240
Query: 189 NWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQA 248
+W F + + L+Q+G +L + E +A +A+ ++++
Sbjct: 241 HWRY-PSFAGESNMVATIEILLDQEGRILSSQVIQSSNNPE-----FDSSALRAIKETES 294
Query: 249 FRLSPSTYKSWRNITLFFVPSKM 271
+ + R + + F ++
Sbjct: 295 VERPRT--ERDRTLRINFNSQEL 315
>gi|237800225|ref|ZP_04588686.1| TonB [Pseudomonas syringae pv. oryzae str. 1_6]
gi|237806413|ref|ZP_04593117.1| TonB [Pseudomonas syringae pv. oryzae str. 1_6]
gi|331023082|gb|EGI03139.1| TonB [Pseudomonas syringae pv. oryzae str. 1_6]
gi|331027526|gb|EGI07581.1| TonB [Pseudomonas syringae pv. oryzae str. 1_6]
Length = 169
Score = 62.6 bits (150), Expect = 5e-08, Method: Composition-based stats.
Identities = 20/139 (14%), Positives = 38/139 (27%), Gaps = 11/139 (7%)
Query: 137 DLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDF 196
AE K + K + R + ++R R W+ P
Sbjct: 36 QEAARKSAEDKKAQALADLLSDKPERQQALADERGDETAGSFDDLIRVRASEGWSRPPSA 95
Query: 197 KRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFR----LS 252
+ + V + + G + G +A AV L
Sbjct: 96 R--NNMSVTLQIGMLPDGTIASVSIAKSSGDG-----PFDSSAVAAVKNIGRLTEMQGLK 148
Query: 253 PSTYKSWRNITLFFVPSKM 271
P+ + +R+ + F P +
Sbjct: 149 PADFAPYRSFKMTFTPGDL 167
>gi|114330315|ref|YP_746537.1| proline-rich region [Nitrosomonas eutropha C91]
gi|114307329|gb|ABI58572.1| Cell division and transport-associated protein TolA [Nitrosomonas
eutropha C91]
Length = 298
Score = 62.6 bits (150), Expect = 6e-08, Method: Composition-based stats.
Identities = 37/265 (13%), Positives = 75/265 (28%), Gaps = 30/265 (11%)
Query: 5 NGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQF 64
++++H FL LL F N + P + L D S ++
Sbjct: 15 RAALFALLVHAAFLALLVFGLNWKNEAPEAMSVDLWADLPQRPIKPVSPVAQVTSQPEPA 74
Query: 65 KG----------------SSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQ 108
K + VR + Q K + E + SK E
Sbjct: 75 KPQSRPQQKTQPQPQPVIKATPPPVRKPEIALKDKTEKPQPKEEVKKLEPVKKEVSKEEP 134
Query: 109 ALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKS 168
A K + + K K + ++ + +K D +K+ + ++
Sbjct: 135 AKKPVEKPASKEEVKKPELVKKEAPKTESIKKVEQKTEKKDDARQQAEAQKQDQQREQQM 194
Query: 169 SRKR-------IPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKIN 221
+ + + A+++ ++ + +P D V+ L G VL
Sbjct: 195 AAAKAAQARALGEIEKYKAMIQAKIRSRIIMPPDLPG--NPAVEFMVTLLPGGDVLTVTL 252
Query: 222 VDVVGGTELVRRMLRENARKAVIKS 246
E +A+ +
Sbjct: 253 RKSSS-----YTAFDEAVERAIYLA 272
>gi|145631075|ref|ZP_01786850.1| TonB [Haemophilus influenzae R3021]
gi|229844953|ref|ZP_04465090.1| TonB [Haemophilus influenzae 6P18H1]
gi|144983360|gb|EDJ90842.1| TonB [Haemophilus influenzae R3021]
gi|229812087|gb|EEP47779.1| TonB [Haemophilus influenzae 6P18H1]
gi|309750333|gb|ADO80317.1| TonB protein [Haemophilus influenzae R2866]
Length = 264
Score = 62.6 bits (150), Expect = 6e-08, Method: Composition-based stats.
Identities = 34/257 (13%), Positives = 81/257 (31%), Gaps = 11/257 (4%)
Query: 12 ILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQEN 71
I+H + + + +N+N S + +S +I E ++ + +
Sbjct: 16 IVHGIVIGFILWNWNEPSDSANSAQGDIS-TSISMELLQGMVLEEPAPEPEDVQKEPEPE 74
Query: 72 LVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKA 131
E + + T E + + + + ++ K+ I+K
Sbjct: 75 PENVQKEPEPEKQEIVEDPTIKPEPKKIKEPEKEKPKPKEKPKKKPKKEVKPQKKPINKE 134
Query: 132 TNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWN 191
K + S T ++ +S + +R + ++
Sbjct: 135 LPKGDENIDSSANVNDKASTTSAANSNAQVAGSGTDTSEIAA----YRSAIRREIESHKR 190
Query: 192 IPSDFKR-FKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFR 250
P+ K K+ +V + F + G + G G L + A A+ S++
Sbjct: 191 YPTRAKIMRKQGKVSVSFNVGADGSLSGAKVTKSSGD-----ESLDKAALDAINVSRSVG 245
Query: 251 LSPSTYKSWRNITLFFV 267
P+ + S ++ + F
Sbjct: 246 TRPAGFPSSLSVQISFT 262
>gi|296117354|ref|ZP_06835944.1| hypothetical protein GXY_16097 [Gluconacetobacter hansenii ATCC
23769]
gi|295976120|gb|EFG82908.1| hypothetical protein GXY_16097 [Gluconacetobacter hansenii ATCC
23769]
Length = 349
Score = 62.6 bits (150), Expect = 6e-08, Method: Composition-based stats.
Identities = 25/203 (12%), Positives = 56/203 (27%), Gaps = 9/203 (4%)
Query: 75 DFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNK 134
+ + A + S + A + P + +K T+
Sbjct: 147 EEPSPDALKLPPQPQSVPAPASAPVPPSPQPEDNAPPKVQEFSHITQPNETKKAVPDTHS 206
Query: 135 EQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAI----VRNRVIANW 190
A++K R + + + + +Q A + N V +
Sbjct: 207 LLATLDSFRADQKQTHPPKARANPAQGGAPDGGGAPDGDITQSMSAADQKGIGNAVRRCY 266
Query: 191 NIPSDFKRFKKLRVKMHFQLNQKGF---VLGKINVDVVGGTELVRRMLRENARKAVIK-- 245
+ + + + + + ++ G V ++ R L E AR AV+
Sbjct: 267 SEDTAARNYAQFVAHLVVTVDATGTARIVEFAPQTQARMDSDPSYRALAERARDAVLSPT 326
Query: 246 SQAFRLSPSTYKSWRNITLFFVP 268
+ + R + F P
Sbjct: 327 CAKLPIPKNLLGQTRQLKFVFRP 349
>gi|330824832|ref|YP_004388135.1| protein TolA [Alicycliphilus denitrificans K601]
gi|329310204|gb|AEB84619.1| protein TolA [Alicycliphilus denitrificans K601]
Length = 320
Score = 62.6 bits (150), Expect = 6e-08, Method: Composition-based stats.
Identities = 25/221 (11%), Positives = 69/221 (31%), Gaps = 10/221 (4%)
Query: 52 SKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTH--ATENETKRSSSSKGEQA 109
+K ++ + K ++ L ++ +E +R + K A + + + A
Sbjct: 108 IALQKQKKREEELKKKREQQLEQEKKDKERRERLEQEKKERQLAQQKAEHEKAERAKKLA 167
Query: 110 LKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSS 169
++ + K+ + E + + K + + + +
Sbjct: 168 EQKRLEQQKAEQEKQKKLAEEKRKAELEAKRAEEFRKDQMRRIAGLAGATGGETATGTAQ 227
Query: 170 RKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTE 229
R PS V +V N P + R ++ + G ++G + G
Sbjct: 228 RSAGPSGGYAGKVAAKVKPNIVYPDLVEG--NPRAEVEVRAAPDGTIVGTRILHSSGN-- 283
Query: 230 LVRRMLRENARKAVIKSQAFRLSPSTYKSWRNITLFFVPSK 270
+ + +A+ +++ + ++ + F P
Sbjct: 284 ---KAWDDAVIRALQRTETLPRDVDG-RVPSSLVIGFRPKD 320
>gi|319775878|ref|YP_004138366.1| TonB [Haemophilus influenzae F3047]
gi|319896586|ref|YP_004134779.1| tonb [Haemophilus influenzae F3031]
gi|329123723|ref|ZP_08252283.1| outer membrane receptor-mediated transport energizer protein TonB
[Haemophilus aegyptius ATCC 11116]
gi|317432088|emb|CBY80439.1| TonB [Haemophilus influenzae F3031]
gi|317450469|emb|CBY86685.1| TonB [Haemophilus influenzae F3047]
gi|327469922|gb|EGF15387.1| outer membrane receptor-mediated transport energizer protein TonB
[Haemophilus aegyptius ATCC 11116]
Length = 260
Score = 62.6 bits (150), Expect = 6e-08, Method: Composition-based stats.
Identities = 33/257 (12%), Positives = 83/257 (32%), Gaps = 15/257 (5%)
Query: 12 ILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQEN 71
I H + + + +N+N S ++ + S + ++ V++ E+
Sbjct: 16 IAHGIVIGFILWNWN---------EPSDSANSAQGDISTSISMELLQGMVLEEPAPEPED 66
Query: 72 LVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKA 131
+ ++ + Q + + + E+ + + + K
Sbjct: 67 VQKEPENVQKEPEPEKQEIVEDPTIKPEPKKIKEPEKEKPKPKEKPKNKPKKEVKPQKKP 126
Query: 132 TNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWN 191
NKE + +++ ++V S + +R + ++
Sbjct: 127 INKELPKGDENIDSSANVNDKASTTSAANSNAQVAGSGTDTSEIAAYRSAIRREIESHKR 186
Query: 192 IPSDFKR-FKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFR 250
P+ K K+ +V + F + G + G G L + A A+ S++
Sbjct: 187 YPTRAKIMRKQGKVSVSFNVGADGSLSGAKVTKSSGD-----ESLDKAALDAINVSRSVG 241
Query: 251 LSPSTYKSWRNITLFFV 267
P+ + S N+ + F
Sbjct: 242 TRPAGFPSSLNVQISFT 258
>gi|293610872|ref|ZP_06693172.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292827216|gb|EFF85581.1| conserved hypothetical protein [Acinetobacter sp. SH024]
Length = 294
Score = 62.6 bits (150), Expect = 6e-08, Method: Composition-based stats.
Identities = 31/273 (11%), Positives = 94/273 (34%), Gaps = 14/273 (5%)
Query: 5 NGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQF 64
++++LH +F+LL++F ++ +S+ + + + ++
Sbjct: 23 AATILAILLH-IFVLLIHFAMPSPSEQ-STKEIAISIRPSNEPVHQADFLAQADQQGSGA 80
Query: 65 KGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYD 124
+ + N D + +R + + + + + +
Sbjct: 81 FREAHRTSSDTPNPMLNDASTGDTELESLQKIHQQRELKFEEKVLMTVLSWQKQADASQR 140
Query: 125 KQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRN 184
K+++ + ++ Q + + + +++ + V+ K+ S + R
Sbjct: 141 KKELEQLQSQFQAKAAMVASLEAQYLQRQQDFSRQQKIKTVDGIQAKKDASAIYLDKFRE 200
Query: 185 RVIANWNIPSDFKRFKK---LRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARK 241
+V N + ++ V++ LN +G + ++ G + +L E A+
Sbjct: 201 KVELYGNRYYPEEAKQQQLRGEVRLMVILNAQGGIRAIRLLESSGHS-----ILDEAAKS 255
Query: 242 AVIKSQAFRLSPSTYKSWRNITLF----FVPSK 270
+V + F + K + + F P++
Sbjct: 256 SVRRGAPFGHFDANMKDISELRIVRTWRFDPAE 288
>gi|226951967|ref|ZP_03822431.1| periplasmic protein TonB [Acinetobacter sp. ATCC 27244]
gi|226837305|gb|EEH69688.1| periplasmic protein TonB [Acinetobacter sp. ATCC 27244]
Length = 294
Score = 62.2 bits (149), Expect = 6e-08, Method: Composition-based stats.
Identities = 33/272 (12%), Positives = 89/272 (32%), Gaps = 14/272 (5%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
+ I++++H + L F+ ++ +SV ++ H+ + ++
Sbjct: 24 AVVIAVMVHGLVLT-TQFSMPSPTDT-STKEIAVSVRPSQDKVEHADFLAQTDQQGSGEF 81
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
+ + ++ + + KR + + + + + K
Sbjct: 82 HQAHRMSSDMPTPMQSDATTGEHELESLETIQQKRELLFEEKVLMTVLSWQKQAEQNERK 141
Query: 126 QKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNR 185
+ + + ++ Q + + + +K+ + V+ K+ S + R +
Sbjct: 142 KALEELQSQFQAKAAMVASLEAQYLQRQQNFSRKQRIKTVDGIQAKQDASAAYLDKFRQK 201
Query: 186 VIANWNIPSDFKRFKK---LRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKA 242
V N ++ V++ LN +G + ++ G +L E AR +
Sbjct: 202 VELYGNRYYPDAAKQQRLAGEVRLMVILNAQGGIRAIRLIESSG-----HPILDEAARAS 256
Query: 243 VIKSQAFRLSPSTYKSWRNITLF----FVPSK 270
V + F S+ K + + F P
Sbjct: 257 VRRGAPFGAFDSSMKDISELRIIRTWRFDPVD 288
>gi|170747179|ref|YP_001753439.1| protein TolA [Methylobacterium radiotolerans JCM 2831]
gi|170653701|gb|ACB22756.1| protein TolA [Methylobacterium radiotolerans JCM 2831]
Length = 450
Score = 62.2 bits (149), Expect = 6e-08, Method: Composition-based stats.
Identities = 16/133 (12%), Positives = 46/133 (34%), Gaps = 5/133 (3%)
Query: 138 LQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFK 197
L + ++ V+ + + +++ ++ ++ P
Sbjct: 316 LASKAPSQSTGATGHAVQKVAALGAATGNAQRLSPSLRDALVGLLQQQIERCYSAPPGAA 375
Query: 198 RFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPS--- 254
+ + + +LN G + + + + GG V + + + A +AV + + + +
Sbjct: 376 Q-GVVLPVLDIRLNPNGSLSTEPRI-MRGGASAVDQSIAQAALRAVRRCAPYNIPATYAP 433
Query: 255 TYKSWRNITLFFV 267
Y W+ I F
Sbjct: 434 YYNDWKAINAEFE 446
>gi|74318225|ref|YP_315965.1| putative TonB protein [Thiobacillus denitrificans ATCC 25259]
gi|74057720|gb|AAZ98160.1| putative TonB protein [Thiobacillus denitrificans ATCC 25259]
Length = 290
Score = 62.2 bits (149), Expect = 6e-08, Method: Composition-based stats.
Identities = 24/242 (9%), Positives = 66/242 (27%), Gaps = 17/242 (7%)
Query: 24 NFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGD 83
++ + P++ S+ E P + + + + + D
Sbjct: 38 SWQTRHPAPVTVDLWESIPQPPAPRPPVPAPPPPEPPQPAPRPVPEPEVKNEPPPPKAPD 97
Query: 84 ----------RFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATN 133
+ + A E + ++ + K + ++K
Sbjct: 98 IALEKKKAAAAKAAALEKAALEKAAQEKAAQEKAAQEKAAQQKAEQEKAAAQRKRDLLRQ 157
Query: 134 KEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIP 193
E++ A++++ + + + + + S ++ +V N +P
Sbjct: 158 MEEEDAIRRMADEEAANQARLLKQAEAKAAAGARQSEIARLVGQHRDLISAKVRGNTRLP 217
Query: 194 SDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSP 253
+ V+ +L G V G + ++A+ KS L
Sbjct: 218 DNLAG--NPEVRCLVRLLPTGEVQSVRVTRSSGN-----PAYDDAVKRAIEKSSPLPLPA 270
Query: 254 ST 255
Sbjct: 271 DR 272
>gi|241205956|ref|YP_002977052.1| TonB family protein [Rhizobium leguminosarum bv. trifolii WSM1325]
gi|240859846|gb|ACS57513.1| TonB family protein [Rhizobium leguminosarum bv. trifolii WSM1325]
Length = 451
Score = 62.2 bits (149), Expect = 7e-08, Method: Composition-based stats.
Identities = 26/227 (11%), Positives = 62/227 (27%), Gaps = 13/227 (5%)
Query: 35 RREMLSVDNIYNEDYHSSKYKKIEEP--------VVQFKGSSQENLVRDFSVQENGDRFS 86
+ V + E+ + + V + + E +
Sbjct: 215 VEPEILVSEVPAEESVAQPMSTVVPEQQQVPLDAVPPSEVQPTAVQPSEVQPAETPAEVA 274
Query: 87 DQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEK 146
++T ET + + + V+ + + K ++ ++
Sbjct: 275 EETPQGVKPIETAEIQPKPEQPPEVVTPTPKPKVAQEKPKPVEKKRPPQKAAGDKGEGQQ 334
Query: 147 KSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKM 206
S V + + + ++ A A + +V + R + V +
Sbjct: 335 TSTRGVAEGNSSAQSDNSSQAANGNNGVGTAATANYKGKVRSRIRRAIRKPRGVEGSVVV 394
Query: 207 HFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSP 253
F +N G + G E + + A AV ++ F P
Sbjct: 395 TFSVNGGGGLTSARVSRGSGVPE-----IDQLALDAVRRAAPFSPPP 436
Score = 35.6 bits (80), Expect = 6.9, Method: Composition-based stats.
Identities = 19/180 (10%), Positives = 46/180 (25%), Gaps = 1/180 (0%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRR-EMLSVDNIYNEDYHSSKYKKIEEP 60
R+ S+I H +L F I + +SV + D + + E
Sbjct: 95 RVALTYICSLIFHATLAAVLLIAFPKAPEEAIEEAGQAMSVVMYGDSDIDQAAAGETETT 154
Query: 61 VVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPV 120
+ Q + Q + T + E + + +
Sbjct: 155 IQQEIIPEEVQPDTIQPTQTAEVQPETVQPTEVSPFEAQDPIQQAPAPEVTRVSPETAAA 214
Query: 121 SPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIA 180
+ + + ++ + P + + V+ S + + +A
Sbjct: 215 VEPEILVSEVPAEESVAQPMSTVVPEQQQVPLDAVPPSEVQPTAVQPSEVQPAETPAEVA 274
>gi|126668394|ref|ZP_01739351.1| TolA family protein [Marinobacter sp. ELB17]
gi|126627103|gb|EAZ97743.1| TolA family protein [Marinobacter sp. ELB17]
Length = 333
Score = 62.2 bits (149), Expect = 7e-08, Method: Composition-based stats.
Identities = 26/233 (11%), Positives = 79/233 (33%), Gaps = 10/233 (4%)
Query: 42 DNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRS 101
+ + ++ + + + Q + Q + + E ++
Sbjct: 107 EKARAQAEKKTQAAEAAKLKADAEAKEQARQKTEQQAQRQLQEAKRKAEEQKQLEEQRKE 166
Query: 102 SSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKEL 161
+ ++ ++ KE+ ++K +A + ++ + A++ + ++
Sbjct: 167 AEAERQKREKEAQEQAEQKRVEAERKRQEAERRLREQNLKALAQQATDAEADQARKSQQA 226
Query: 162 LSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKIN 221
+ + ++ ++ A++R+ + W PS ++ ++ L G ++
Sbjct: 227 AAARAREAQMLTDAEKYQALIRDSLSRAWYPPSSA--TEETTARLQISLLPTGELVNVTL 284
Query: 222 VDVVGGTELVRRMLRENARKAVIKSQAFRLSPSTYKS---WRNITLFFVPSKM 271
V G T +A AV + + +R T+ F PS++
Sbjct: 285 VRGSGNT-----AFDNSALSAVRSLNRYPVPKDRDTFDSYFRQFTIEFNPSRL 332
Score = 54.1 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 16/171 (9%), Positives = 56/171 (32%)
Query: 7 LAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKG 66
+A S+ LH++ L++ ++ +S I E + ++++P +
Sbjct: 1 MAFSVGLHLLILVIAISGWSWSSSNYEPPPRSISARLISPEPRPTPDVTEVDQPDEAEQR 60
Query: 67 SSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQ 126
++ + + + R +++ K + + + + + +
Sbjct: 61 LVEDRKLLEQQRETEQQRKAEEQKKKQEADARVQQQAEQKREEQAQEKARAQAEKKTQAA 120
Query: 127 KISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQD 177
+ +K + + ++ + +K K + RK ++
Sbjct: 121 EAAKLKADAEAKEQARQKTEQQAQRQLQEAKRKAEEQKQLEEQRKEAEAER 171
>gi|197287512|ref|YP_002153384.1| TonB-like protein [Proteus mirabilis HI4320]
gi|227358225|ref|ZP_03842566.1| TonB family protein [Proteus mirabilis ATCC 29906]
gi|194684999|emb|CAR47229.1| TonB-like protein [Proteus mirabilis HI4320]
gi|227161561|gb|EEI46598.1| TonB family protein [Proteus mirabilis ATCC 29906]
Length = 263
Score = 62.2 bits (149), Expect = 7e-08, Method: Composition-based stats.
Identities = 37/250 (14%), Positives = 67/250 (26%), Gaps = 27/250 (10%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
GL S++ HV +++ + +++ EP
Sbjct: 18 GLTASIVFHVTLVVVAIGWITTKDEQYAVLPPAMTM-------QVGLYQLAKAEPKEVPV 70
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
G Q V + + E D K E T + K + + P D
Sbjct: 71 GPEQVMSVPEAAEPEPMKEQLDVPKMPVVEQGTYERVAEKPKVKPVVKPKPVVVKVPDDL 130
Query: 126 QKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNR 185
+ + + + +S R ++V +
Sbjct: 131 PVSEAPAD--------------TTTAPLSGENATSSADFTSTASSSRSGQMGWESLVHSH 176
Query: 186 VIANWNIPSDFKRFKKLRVK-MHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVI 244
+ P RFK V + LN KG +L G R+L + A +
Sbjct: 177 IDMYKRYPRAALRFKATGVTQVEISLNAKGELLDVSIQTSSGN-----RILDKEAINTIK 231
Query: 245 KSQAFRLSPS 254
++ F S
Sbjct: 232 RASPFPAPES 241
>gi|257455249|ref|ZP_05620484.1| conserved hypothetical protein [Enhydrobacter aerosaccus SK60]
gi|257447211|gb|EEV22219.1| conserved hypothetical protein [Enhydrobacter aerosaccus SK60]
Length = 321
Score = 62.2 bits (149), Expect = 7e-08, Method: Composition-based stats.
Identities = 36/313 (11%), Positives = 90/313 (28%), Gaps = 61/313 (19%)
Query: 6 GLAISMILHVMFLLLLYF----NFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPV 61
+ +S I H + + LL+F + + E LSV + ++ + +
Sbjct: 21 AIVLSAIAHALVVGLLFFFYHNTPPAPMETSLITPEQLSVMEGQIKANQQNELAQNQATA 80
Query: 62 VQFKGSSQENLVRDF-----------SVQENGDRFSDQTKTHATENETKRSSSSKGEQAL 110
+ G+ +L + + + + E +++ ++
Sbjct: 81 GEMAGAPTPSLNSQTLSTVPMNTPHSTSTNQIETVKNTLAAKQAQWEKEQALFAEKLDRE 140
Query: 111 KESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSR 170
+ + + + + ++ + + E K+ K L + E+ S
Sbjct: 141 VAAERQSVIDELNQRNETQQRNLQDYKIAESNIDEVKNEIRANNAAYNKNLNANSERQSD 200
Query: 171 KRIPS----------------------------------QDAIAIVRNRVIANWNIPSDF 196
I S ++ V + ANWN+P+
Sbjct: 201 NSIKSLDLGKDGQSTGAAQSQSSSGQGSSRRGGASGGSSAGYVSQVMAMIDANWNVPT-- 258
Query: 197 KRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPSTY 256
+ F + G + G ++ + + ++A+ +S P+
Sbjct: 259 -NSNGNSLTASFSIAADGTISNITI---RGSSDAAFKA---SLQQAINQSSPLPPPPNGA 311
Query: 257 KSWRNITLFFVPS 269
R +T F
Sbjct: 312 ---RTMTGNFKAK 321
>gi|194290722|ref|YP_002006629.1| tonb-related transmembrane protein [Cupriavidus taiwanensis LMG
19424]
gi|193224557|emb|CAQ70568.1| putative tonB-related transmembrane protein [Cupriavidus
taiwanensis LMG 19424]
Length = 310
Score = 62.2 bits (149), Expect = 7e-08, Method: Composition-based stats.
Identities = 34/275 (12%), Positives = 75/275 (27%), Gaps = 22/275 (8%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
L LAIS+ +H + L++ V + L V + + +
Sbjct: 22 LARALAISVAVHALLLMVRVAAPEVFEIKRSD--AALDVVLVNAKSAQKPRNPTALAQAN 79
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
G + + + + A + P
Sbjct: 80 LDGGGDHDLQRATTPLPAQTVTQEGDLVRQVQRRVEQLEQEQQRLLTQAREASPAVRNQP 139
Query: 123 YDKQKISKATNKEQDLQGISFAEKKSIDTVVVRP----DKKELLSKVEKSSRKRIPSQDA 178
+ + T + + S E ++ + R K+ ++ +S + +
Sbjct: 140 LKPGEKRQDTPQRGQDERTSSDEMARLEAEIGRNLEHYAKRPKRFQLTATSAQAVDYAQY 199
Query: 179 IAIVRNRVIANWNIPSDFKRFKKL--RVKMHFQLNQKG---------FVLGKINVDVVGG 227
+R ++ A + K L ++ + +N++G V V G
Sbjct: 200 YDRLRRKIEARGTTDFPQRNGKPLYGQLILVINVNRQGKLGYNRDGYNVDAIDVVKSSGD 259
Query: 228 TELVRRMLRENARKAVIKSQAFRLSPSTYKSWRNI 262
L A V + F + S ++I
Sbjct: 260 -----PALDRQAVAIVRAAAPFGAFTAEMASRQDI 289
>gi|331000273|ref|ZP_08323957.1| protein TolA [Parasutterella excrementihominis YIT 11859]
gi|329572439|gb|EGG54092.1| protein TolA [Parasutterella excrementihominis YIT 11859]
Length = 399
Score = 62.2 bits (149), Expect = 7e-08, Method: Composition-based stats.
Identities = 25/230 (10%), Positives = 69/230 (30%), Gaps = 8/230 (3%)
Query: 41 VDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKR 100
+ + + ++ E + + ++ + + ++ + + A + E K+
Sbjct: 173 AEEARQAELRRQEEERRIEEQKRQEELKKQEEQKRLAEEKRKAEEKAEAERKAKQEELKK 232
Query: 101 SSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKE 160
+ + + +E A ++ K + + Q+ + ++
Sbjct: 233 QAQERERKIAEEKAQREKALAEKRKAQEELNRQRAQEQANAARRKEMLSRLTGQSGSAMG 292
Query: 161 LLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKI 220
S + ++ + +A +R + N + K +L + G
Sbjct: 293 SGSGAMTNFQQAQYNNRIVACIRPHITFN---TPAGAKRGMYVAKFDVRLLKNGQKAVPP 349
Query: 221 NVDVVGGTELVRRMLRENARKAVIKSQAFRLSPSTYKSWRNITLFFVPSK 270
+ G + KA++ F P +ITL F P
Sbjct: 350 KMISSSG----LKAFDTAVEKAILMCNPFPKPPVG-DIPSSITLTFDPVD 394
>gi|319762691|ref|YP_004126628.1| protein tola [Alicycliphilus denitrificans BC]
gi|317117252|gb|ADU99740.1| protein TolA [Alicycliphilus denitrificans BC]
Length = 320
Score = 62.2 bits (149), Expect = 8e-08, Method: Composition-based stats.
Identities = 25/221 (11%), Positives = 69/221 (31%), Gaps = 10/221 (4%)
Query: 52 SKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTH--ATENETKRSSSSKGEQA 109
+K ++ + K ++ L ++ +E +R + K A + + + A
Sbjct: 108 IALQKQKKREEELKKKREQQLEQEKKDKERRERLEQEKKERQLAQQKAEHEKAERAKKLA 167
Query: 110 LKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSS 169
++ + K+ + E + + K + + + +
Sbjct: 168 EQKRLEQQKAEQEKQKKLAEEKRKAELEAKRAEEFRKDQMRRIAGLAGATGGETATGTAQ 227
Query: 170 RKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTE 229
R PS V +V N P + R ++ + G ++G + G
Sbjct: 228 RSAGPSGSYAGKVAAKVKPNIVYPDLVEG--NPRAEVEVRAAPDGTIVGTRILHSSGN-- 283
Query: 230 LVRRMLRENARKAVIKSQAFRLSPSTYKSWRNITLFFVPSK 270
+ + +A+ +++ + ++ + F P
Sbjct: 284 ---KAWDDAVIRALQRTETLPRDVDG-RVPSSLVIGFRPKD 320
>gi|218461046|ref|ZP_03501137.1| TonB family protein [Rhizobium etli Kim 5]
Length = 416
Score = 62.2 bits (149), Expect = 8e-08, Method: Composition-based stats.
Identities = 28/224 (12%), Positives = 68/224 (30%), Gaps = 11/224 (4%)
Query: 36 REMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATE 95
E + + + +P+ + + E T+ E
Sbjct: 194 PETVVAAEPEILVSQNPADTFVAQPMGAAVPEQPVPDIMPTTAPEQVAPAVQPTEVLPEE 253
Query: 96 NETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVR 155
+ ++ + K ++ V + ++ KE+ G + +++K V
Sbjct: 254 VKPVEAAEVSSKPEEKPELKPKLKVEKPKPDEKRQSRKKEEPTGGKNGSDRKDTTRGVAT 313
Query: 156 PDKKELLSKVEK-----SSRKRIPSQDAIAIVRNRVIANWNIPSDFKR-FKKLRVKMHFQ 209
S + + V+ R+ +PS++KR + + V++
Sbjct: 314 GQDAPESSGMSTGAGRGDGAGSAAVANYPGKVQKRIRRAIRVPSEYKRMGEAISVRLRLT 373
Query: 210 LNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSP 253
++ G + D G + L + A V ++ F P
Sbjct: 374 IDGTGRLSSVSVADSSGIPD-----LDKAALDGVRRAAPFPPLP 412
>gi|153002738|ref|YP_001368419.1| TonB family protein [Shewanella baltica OS185]
gi|151367356|gb|ABS10356.1| TonB family protein [Shewanella baltica OS185]
Length = 268
Score = 61.8 bits (148), Expect = 9e-08, Method: Composition-based stats.
Identities = 28/252 (11%), Positives = 76/252 (30%), Gaps = 16/252 (6%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
L ++ LH+ ++ ++ ++ P + + + I +
Sbjct: 16 ALLLAAFLHIALTAAVF--WSPAVITPSGQAKAVGNGGIEISLGPAGSAASTLPQTTAPV 73
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
+ + + + + T + K + + ++ +S + SP +
Sbjct: 74 AKQKSEPIAEQLDKPARLPPITKKVTPTLSTKPKPIAPTPQDELTTQSEVNEQHSSPTET 133
Query: 126 QKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNR 185
+ + ++ A+ + +QD A +
Sbjct: 134 PSPTASAASANEVGQNGEADSAEQNKAASGDKMTGGG--------LLGDTQDYTATLLAW 185
Query: 186 VIANWNIPSDFK-RFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVI 244
+ + P + R ++ V ++F L+++G V G + L A K +
Sbjct: 186 LEQHKEYPRTARNRRQQGTVMLYFVLDRQGRVSASRIEQSSG-----YQTLDAEALKMLE 240
Query: 245 KSQAFRLSPSTY 256
++Q P T
Sbjct: 241 RAQPLPAIPDTM 252
>gi|301168905|emb|CBW28499.1| membrane spanning protein in TonB-ExbB-ExbD complex [Haemophilus
influenzae 10810]
Length = 266
Score = 61.8 bits (148), Expect = 9e-08, Method: Composition-based stats.
Identities = 37/257 (14%), Positives = 81/257 (31%), Gaps = 9/257 (3%)
Query: 12 ILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQEN 71
I H + + + +N+N S + +S +I E ++ + +
Sbjct: 16 IAHGIVIGFILWNWNEPSDSANSAQGDIS-TSISMELLQGMVLEEPAPEPEDAQKEPEPE 74
Query: 72 LVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKA 131
V+ E + D T + + + + P QK K
Sbjct: 75 NVQKEPEPEKQEIVEDPTIKPEPKKIKEPEKEKPKPKEKPKEKPKNKPKKEVKPQK--KP 132
Query: 132 TNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWN 191
NKE + +++ ++V S + +R + ++
Sbjct: 133 INKELPKGDENIDSSANVNDKASTTSAANSNAQVAGSGTDTSEIAAYRSAIRREIESHKR 192
Query: 192 IPSDFKR-FKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFR 250
P+ K K+ +V + F + G + G G L + A A+ S++
Sbjct: 193 YPTRAKIMRKQGKVSVSFNVGADGSLSGAKVTKSSGD-----ESLDKAALDAINVSRSVG 247
Query: 251 LSPSTYKSWRNITLFFV 267
P+ + S ++ + F
Sbjct: 248 TRPAGFPSSLSVQISFT 264
>gi|209884039|ref|YP_002287895.1| TonB family protein [Oligotropha carboxidovorans OM5]
gi|209872235|gb|ACI92031.1| TonB family protein [Oligotropha carboxidovorans OM5]
Length = 277
Score = 61.8 bits (148), Expect = 9e-08, Method: Composition-based stats.
Identities = 28/246 (11%), Positives = 67/246 (27%), Gaps = 8/246 (3%)
Query: 9 ISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSS 68
+S +L L+ + + P L I S + +
Sbjct: 20 MSALLVTALHGLVVIGWTLWPEPPQPLGAHLPPAIIELSLVSVSPQETELDLAPGPVMQE 79
Query: 69 QENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKI 128
++ + F+ ++ + K E+A + + +
Sbjct: 80 SDSATTAAKPAAAEEAFAPVLPPMDSDLVLPAAQ-PKAEKAPVTEKEPVKSEAEKEAPQT 138
Query: 129 SKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIA 188
K K++ + A K + + + S+V + + +
Sbjct: 139 RKPVEKKKTHTDRTPAPKTTASRRAEQRAHQAASSRVGAQAMANALP-SYRERLAAHLQR 197
Query: 189 NWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQ 247
P + + + ++ F +N+ G VL G + L L + ++Q
Sbjct: 198 YKRYPPELRAAGVRGVARLTFTVNRSGHVLSSRLTGSSGNSSLDAETLAM-----IRRAQ 252
Query: 248 AFRLSP 253
P
Sbjct: 253 PLPSFP 258
>gi|183599373|ref|ZP_02960866.1| hypothetical protein PROSTU_02842 [Providencia stuartii ATCC 25827]
gi|188021611|gb|EDU59651.1| hypothetical protein PROSTU_02842 [Providencia stuartii ATCC 25827]
Length = 267
Score = 61.8 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 31/258 (12%), Positives = 73/258 (28%), Gaps = 28/258 (10%)
Query: 1 MRLENGLAISMILHVMFLLLLYFNF---NVQLLVPISRREMLSVDNIYNEDYHSSKYKKI 57
M++ + + +++ LH + + L + VP + + ++
Sbjct: 14 MKMGSAVIVAIALHFLVIGLFLRSSDDQQWDNPVPPPSVVVEVSMEAEAKQVTEVNIGQV 73
Query: 58 EEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLR 117
+E V K E + + + K E K L
Sbjct: 74 QEVSVASKAQEAEPEQSELPTAPVNENAELLVTKTEKKKPQPTPKKEKKEPPKKPIKKLE 133
Query: 118 MPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQD 177
S + ++ + I+ + +
Sbjct: 134 SDNSKSNSAPVTSDAAALKQSNKIAADFNSQSQSQLDAEK-------------------A 174
Query: 178 AIAIVRNRVIANWNIPSDFKRFKK-LRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLR 236
A+V ++ P D +R + + F ++ +G+V+ + G R L
Sbjct: 175 WQALVLGQLNKFKRYPDDARRRNRTGIPVVEFDVDAQGYVIKSSLIKGSGT-----RSLD 229
Query: 237 ENARKAVIKSQAFRLSPS 254
A K + ++Q + P+
Sbjct: 230 REAEKVLSRAQPLPIPPA 247
>gi|163869132|ref|YP_001610371.1| TolA protein [Bartonella tribocorum CIP 105476]
gi|161018818|emb|CAK02376.1| TolA protein [Bartonella tribocorum CIP 105476]
Length = 498
Score = 61.8 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/255 (12%), Positives = 70/255 (27%), Gaps = 13/255 (5%)
Query: 27 VQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFS 86
+ P + L + + + E ++ + +
Sbjct: 239 APKVAPEMPLQALEDALKVAPEMPLQALEDAPPKLSLKPAHKSEEMISPKELAPTVQKVP 298
Query: 87 DQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEK 146
+ + K M QK+SK K Q+ Q I
Sbjct: 299 AEQTVPQAPKIALPEKPLLPQFKPKFDQEFPMKKEGALNQKMSKLNKKNQEKQTIEDILA 358
Query: 147 KSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNR----------VIANWNIPSDF 196
+ ++ R + +K + ++ + + + +
Sbjct: 359 MEENNLLNRARSQGGGAKRSHTPEALGARKNIHDTTKMAQTLVNIAGGCIQQKLKLVALG 418
Query: 197 KRFKK-LRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAF-RLSPS 254
K V++ F L+++G V+G ++ V G E + ++ AV Q + L
Sbjct: 419 GDLKNRPVVRLRFYLDREGMVMGDPIIEPVSGLESQQAIMIRQVYAAVFSCQPYADLPRD 478
Query: 255 TYKSW-RNITLFFVP 268
Y W + P
Sbjct: 479 QYGLWGQGFDFNVDP 493
Score = 47.6 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 24/165 (14%), Positives = 56/165 (33%), Gaps = 1/165 (0%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
++ GLA+S+++HV+FL F + +P E + + + SS+ ++ P+
Sbjct: 9 MKRGLALSLVVHVIFLGWGAVQFMNSVSLPQPL-EAIPITLAPLMEEFSSQQGSVKAPIH 67
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
++ + + E +S + S ++ S
Sbjct: 68 AVPAVKPTTKPQEKEDARHIGEGQRDSLAPFQPKEKPQSVETTPPPISNPSETSKLTESV 127
Query: 123 YDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEK 167
K + E LQ + A K + + + + ++
Sbjct: 128 EAKTEDVPKVAPEMPLQALEDAPKVAPEMPLQALEDAPKVAPETP 172
>gi|308271862|emb|CBX28470.1| hypothetical protein N47_G37940 [uncultured Desulfobacterium sp.]
Length = 185
Score = 61.8 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 22/180 (12%), Positives = 52/180 (28%), Gaps = 7/180 (3%)
Query: 89 TKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKS 148
K E +++ + E+ + ES + + + ++ +K +
Sbjct: 3 PKKKVESAELIKNAVKEMEKRVGESRPSSVSDAIGKIRSQVESGSKAGKFDTADQVKGFG 62
Query: 149 IDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKL-RVKMH 207
+ ++ + + A + ++ NW +
Sbjct: 63 LQGAGIKGAAPGVPGGSGGGNMPIGLLDIYKAEIFYKIQQNWAYSEQLGGSGSGAMAVLV 122
Query: 208 FQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPSTYKSWR-NITLFF 266
++ + G + G R L E+A +A+ K+ P Y I L F
Sbjct: 123 IKIMRTGQISGIRFESRSQN-----RYLDESAYRAIQKANPLPPLPEGYDRPNYEIGLRF 177
>gi|303258202|ref|ZP_07344209.1| protein TolA [Burkholderiales bacterium 1_1_47]
gi|302858955|gb|EFL82039.1| protein TolA [Burkholderiales bacterium 1_1_47]
Length = 399
Score = 61.8 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/230 (10%), Positives = 68/230 (29%), Gaps = 8/230 (3%)
Query: 41 VDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKR 100
+ + + ++ E + + ++ + + ++ + + A + E K+
Sbjct: 173 AEEARQAELRRQEEERRIEEQKRQEELKKQEEQKRLAEEKRKAEEKAEAERKAKQEELKK 232
Query: 101 SSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKE 160
+ + + +E A ++ K + + Q+ ++
Sbjct: 233 QAQERERKIAEEKAQREKALAEKRKAQEELNRQRAQEQANAVRRKEMLSRLTGQSGSAMG 292
Query: 161 LLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKI 220
S + ++ + +A +R + N + K +L + G
Sbjct: 293 SGSGAMTNFQQAQYNNRIVACIRPHITFN---TPAGAKRGMYVAKFDVRLLKNGQKAVPP 349
Query: 221 NVDVVGGTELVRRMLRENARKAVIKSQAFRLSPSTYKSWRNITLFFVPSK 270
+ G + KA++ F P +ITL F P
Sbjct: 350 KMISSSG----LKAFDTAVEKAILMCNPFPKPPVG-DIPSSITLTFDPVD 394
>gi|317052275|ref|YP_004113391.1| TonB family protein [Desulfurispirillum indicum S5]
gi|316947359|gb|ADU66835.1| TonB family protein [Desulfurispirillum indicum S5]
Length = 264
Score = 61.8 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 31/231 (13%), Positives = 67/231 (29%), Gaps = 10/231 (4%)
Query: 29 LLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQ 88
+ + VD + + EPV S + + E
Sbjct: 24 DTEEADQPVPIEVDYFRHTPESPVVEPHVLEPVAPPALVSPPVESVESADPEPLPERDQP 83
Query: 89 TKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKS 148
++ A E + + S +++ L+ S + E DL+ +
Sbjct: 84 EESAAEEPPAEAPTVSLPRRSITMDDLMAEQSSADESLPFDPYRLSEADLRQLDDLFGHE 143
Query: 149 IDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDF-KRFKKLRVKMH 207
D D R+ + ++ ++ W P + ++ V +
Sbjct: 144 QDPATESEDVITFED-----GFYRLEYASFLWQLKRKIENVWIYPRAAIQEGEQGIVLLR 198
Query: 208 FQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPSTYKS 258
F + + G + G V ++ V L A +AV + + P +
Sbjct: 199 FHIRKNGELDGVELVR--NPSQSVY--LANAALRAVRDAAPYAPLPDPLER 245
>gi|260582865|ref|ZP_05850650.1| TolA protein [Haemophilus influenzae NT127]
gi|260094078|gb|EEW77981.1| TolA protein [Haemophilus influenzae NT127]
Length = 264
Score = 61.8 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 34/257 (13%), Positives = 80/257 (31%), Gaps = 11/257 (4%)
Query: 12 ILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQEN 71
I H + + + +N+N S + +S +I E ++ + +
Sbjct: 16 IAHGIVIGFILWNWNEPSDSANSAQGDIS-TSISMELLQGMVLEEPAPEPEDVQKEPEPE 74
Query: 72 LVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKA 131
E + + T E + + + + ++ K+ I+K
Sbjct: 75 PENVQKEPEPEKQEIVEDPTIKPEPKKIKEPEKEKPKPKEKPKKKPKKEVKPQKKPINKE 134
Query: 132 TNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWN 191
K + S T ++ +S + +R + ++
Sbjct: 135 LPKGDENIDSSANVNDKASTTSAANSNAQVAGSGTDTSEIAA----YRSAIRREIESHKR 190
Query: 192 IPSDFKR-FKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFR 250
P+ K K+ +V + F + G + G G L + A A+ S++
Sbjct: 191 YPTRAKIMRKQGKVSVSFNVGADGSLSGAKVTKSSGD-----ESLDKAALDAINVSRSVG 245
Query: 251 LSPSTYKSWRNITLFFV 267
P+ + S ++ + F
Sbjct: 246 TRPAGFPSSLSVQISFT 262
>gi|237746666|ref|ZP_04577146.1| predicted protein [Oxalobacter formigenes HOxBLS]
gi|229378017|gb|EEO28108.1| predicted protein [Oxalobacter formigenes HOxBLS]
Length = 294
Score = 61.5 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 24/272 (8%), Positives = 70/272 (25%), Gaps = 32/272 (11%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPV 61
+L+ +++ +H++ + L+ + Q +M+ + + ++ +
Sbjct: 13 KLKPAFVLALAVHLVLVAFLWIGVSWQA----DTGDMVEAEVWDIKVREAAPLAAGQRSA 68
Query: 62 VQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVS 121
+ +++ + + + + ++ + + +
Sbjct: 69 MAAAEQTEQRVAAEPPAASPEPEMREPVARTRPDIALEQEKKKAEAKKRADERKRQQEEQ 128
Query: 122 PYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKR--------- 172
K++ A K+Q + K +D R K +
Sbjct: 129 ARLKKEAEDARKKQQADAAAAKRAKVLLDQEAKRIAGGGSGGGTGKGTGGGGTATSGPTG 188
Query: 173 --------------IPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLG 218
I V ++ +N + V +L G +
Sbjct: 189 SGGTGTSPYSTGPGKADAGYIQKVAAKIKSNTSFSVPASLAGNPPVVYDVELLPDGTLRN 248
Query: 219 KINVDVVGGTELVRRMLRENARKAVIKSQAFR 250
G E +A+ KS +
Sbjct: 249 IRKRKSSGVAG-----FDEAVLRAIEKSAPYP 275
>gi|311103833|ref|YP_003976686.1| TonB family C-terminal domain-containing protein 1 [Achromobacter
xylosoxidans A8]
gi|310758522|gb|ADP13971.1| TonB family C-terminal domain protein 1 [Achromobacter xylosoxidans
A8]
Length = 299
Score = 61.5 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 30/249 (12%), Positives = 78/249 (31%), Gaps = 17/249 (6%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
L G+AIS+++H L F P++ E++ + + +
Sbjct: 26 LRIGIAISLLVHAGALAW-RFGAPALSRPPVTSLEVV---LLNARSETPPDTPRAQAQNQ 81
Query: 63 QFKGSSQENLVRDFSVQENGDRFS----DQTKTHATENETKRSSSSKGEQALKESALLRM 118
G + E + + G+ + + + E +++ +A ++ R
Sbjct: 82 MSGGGNAERGMSTTPLPRTGESAETIVLEAMRRRQVQLEAEQTRLMTQLRAADKAGAERQ 141
Query: 119 PVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDA 178
V+P+ + +D + + + + V+ E + S +
Sbjct: 142 AVNPWPD--GADLGRDAEDQASLIQSAQVAALAARVQQYSAEPRKQFVAPSAEASRYAAY 199
Query: 179 IAIVRNRVIANWNIPSDFKRFKKL--RVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLR 236
+ R R+ A + ++ +++ + G + +L
Sbjct: 200 LDAWRTRIEAVGTQHYPDEARGRIYGSLRITVSVRADGSIADVEIDQPSPHA-----VLN 254
Query: 237 ENARKAVIK 245
+ AR+ V
Sbjct: 255 QAARRIVQL 263
>gi|256160386|ref|ZP_05458076.1| TonB family protein [Brucella ceti M490/95/1]
gi|256255594|ref|ZP_05461130.1| TonB family protein [Brucella ceti B1/94]
gi|261222799|ref|ZP_05937080.1| TonB [Brucella ceti B1/94]
gi|265998757|ref|ZP_06111314.1| TonB [Brucella ceti M490/95/1]
gi|260921383|gb|EEX88036.1| TonB [Brucella ceti B1/94]
gi|262553446|gb|EEZ09215.1| TonB [Brucella ceti M490/95/1]
Length = 308
Score = 61.5 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 24/236 (10%), Positives = 59/236 (25%), Gaps = 6/236 (2%)
Query: 18 LLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFS 77
+ + L+ P R V + + E + + +
Sbjct: 62 VAAMVVELVPDLVAPAEERVSEEVQPETTTEQPEEVQPEPEPEPQPEAKAEPQQVQEPEE 121
Query: 78 VQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQD 137
V + E + + +A + ++ K K K K+ +
Sbjct: 122 VIPDVVEAQKPEVAVPLPVEKPQEKPEEKPKAEPKPEPKKVEKLKPQKPKPEKVKPKKAE 181
Query: 138 LQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFK 197
+ + E S+ + + +++ + N
Sbjct: 182 KAAETREASAPRVDADNGAKVAA-SKRGETSASAGVIWAKWTSRLQSHMARNARFLQGKS 240
Query: 198 RFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSP 253
R + + F ++ G VL G + + A +A ++ P
Sbjct: 241 RNTRGEAHVAFVIDPSGNVLSARIAVSSGD-----PAVDQLALEAARRASPVPAPP 291
>gi|90023042|ref|YP_528869.1| hypothetical protein Sde_3402 [Saccharophagus degradans 2-40]
gi|89952642|gb|ABD82657.1| TonB-like protein [Saccharophagus degradans 2-40]
Length = 431
Score = 61.5 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 35/253 (13%), Positives = 81/253 (32%), Gaps = 8/253 (3%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
+ + L S++ + L FN R E+++ + + + + E V
Sbjct: 167 ISSNLKASLLSPAVIDKTLLARFNAVTPSADRREEIVAWTKVPAKPEPVEQVQPKAEVVK 226
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
+ A + + + ++ K+ ++
Sbjct: 227 AALVKAPVQTPVVPKKAPAPVERPKPVAKVADKPVASQMVEAVKQEEKKQLEPKQVEPKA 286
Query: 123 YDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIV 182
+ K K+ A + +TVV E + ++ + + Q +
Sbjct: 287 VEPPKQVAEPPKQVVAASKVVAPVTTAETVVELESDDETMEGLD--AGGLLVRQKYYDQL 344
Query: 183 RNRVIANWNIPSDF-KRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARK 241
+I +IP +R + V+++ +N+ G V+ TE +M + A +
Sbjct: 345 SKHLIQQQSIPRQAFQRRLEDEVRVYLTINRNGTVMAAELE-----TESKYKMFNQQALE 399
Query: 242 AVIKSQAFRLSPS 254
A+ K+ F P
Sbjct: 400 AIEKAGVFPAMPE 412
>gi|77920134|ref|YP_357949.1| periplasmic protein TonB [Pelobacter carbinolicus DSM 2380]
gi|77546217|gb|ABA89779.1| periplasmic protein TonB [Pelobacter carbinolicus DSM 2380]
Length = 272
Score = 61.5 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 31/244 (12%), Positives = 69/244 (28%), Gaps = 8/244 (3%)
Query: 18 LLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFS 77
+LL F LL + + + D + ++ P + +
Sbjct: 9 ILLAAFAVLSLLLHALLLYLLPADDLLVAPSVKKPVVVEVRPPQQRPREVDMPAQPVTQP 68
Query: 78 VQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQD 137
++ R + + + E + + + +A K+
Sbjct: 69 RRKPAKRLAPRDQVVPRETAPRGDAPEDRQPLPTVAAPPPAAAPVERKRPGDTGAVSPAP 128
Query: 138 LQGISFAEKKSIDTVVVRPDKKELLSKVEKS--SRKRIPSQDAIAIVRNRVIANWNIP-S 194
L + +E + + E ++ R+ + WN P +
Sbjct: 129 LDLGLPQTTQQRLREGWARKYREDVEEGEAVWLDTEKDLLSSFFKRFRDNIYQVWNYPRA 188
Query: 195 DFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPS 254
+R + + +NQ G V ++ G L A AV + ++ PS
Sbjct: 189 AAERGQSGVCLLRIVINQDGSVDAVEPLESSG-----YPTLDREAIAAVYRGASYGNLPS 243
Query: 255 TYKS 258
+Y
Sbjct: 244 SYAK 247
>gi|113869116|ref|YP_727605.1| periplasmic protein TonB, links inner and outer membranes
[Ralstonia eutropha H16]
gi|113527892|emb|CAJ94237.1| Periplasmic protein TonB, links inner and outer membranes
[Ralstonia eutropha H16]
Length = 310
Score = 61.5 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 35/275 (12%), Positives = 74/275 (26%), Gaps = 22/275 (8%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
L LAIS+ +HV+ L++ V + L V + + +
Sbjct: 22 LAKALAISVAVHVLLLMVRVAAPEVFEIKRSD--AALDVVLVNAKSAQKPRNPTALAQAN 79
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
G + + + + A + P
Sbjct: 80 LDGGGDHDLQRATTPLPAQTQTQEGDLVRQVQRRVEQLEQEQQRLLTQSREAAPSVRNQP 139
Query: 123 YDKQKISKATNKEQDLQGISFAEKKSIDTVVVRP----DKKELLSKVEKSSRKRIPSQDA 178
+ + T + + S E ++ + R K+ ++ +S + +
Sbjct: 140 LKPGEKRQDTPQRGQDERTSTDEMARLEAEIGRNLDHYAKRPKRFQLTATSAQAVDYAQY 199
Query: 179 IAIVRNRVIANWNIPSDFKRFKKLRVKM----------HFQLNQKG-FVLGKINVDVVGG 227
+R+++ A + K L ++ N+ G V V G
Sbjct: 200 YDRLRHKIEARGTTDFPQRNGKPLYGQLILVINVNRLGKLGYNRDGYNVDAIDVVKSSGD 259
Query: 228 TELVRRMLRENARKAVIKSQAFRLSPSTYKSWRNI 262
L A V + F + S ++I
Sbjct: 260 -----PALDRQAVAIVRAAAPFGPFTAEMASRQDI 289
>gi|330991877|ref|ZP_08315826.1| Agglutinin receptor [Gluconacetobacter sp. SXCC-1]
gi|329760898|gb|EGG77393.1| Agglutinin receptor [Gluconacetobacter sp. SXCC-1]
Length = 330
Score = 61.5 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 17/212 (8%), Positives = 43/212 (20%), Gaps = 6/212 (2%)
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
+E +V+ ++E + P
Sbjct: 119 DAPTPPREQQPSPDAVRLPPTPAKAAPAQAHAPVPPSAQPDPTAAPKVQEQSRTTQPNEA 178
Query: 123 YD-KQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAI 181
+ +
Sbjct: 179 KKHVPDTHSLLATLDSFRADQKQTHPPKARANPLQGGAPDGGGTPDGDITSALTSTEQKA 238
Query: 182 VRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGF---VLGKINVDVVGGTELVRRMLREN 238
+ + V ++ + + + + + +++ G V ++ R L E
Sbjct: 239 IGSAVRRCYSEDTAARNYAQFVAHLVVTVDETGTARLVEFAPQTQAQMASDPSYRALAER 298
Query: 239 ARKAVIK--SQAFRLSPSTYKSWRNITLFFVP 268
AR AV+ + + R + F P
Sbjct: 299 ARDAVLSPTCAKLPIPQNLLGQTRQLKFVFRP 330
>gi|307823676|ref|ZP_07653904.1| putative CheA signal transduction histidine kinase [Methylobacter
tundripaludum SV96]
gi|307734970|gb|EFO05819.1| putative CheA signal transduction histidine kinase [Methylobacter
tundripaludum SV96]
Length = 281
Score = 61.1 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 20/131 (15%), Positives = 46/131 (35%), Gaps = 10/131 (7%)
Query: 141 ISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFK 200
+ A + + + + + + ++ + A A +R +V +W P +
Sbjct: 154 RAEAARVKAEAERAEAARMDAEQARMDAEQDQLAIKTAAAAIRQKVAQSWIRPVSA--TE 211
Query: 201 KLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPSTY---K 257
L+ + +L G V+ + V G + +A AV K+ + K
Sbjct: 212 GLKCTIQVRLMSDGTVIDAVVVTSSGDA-----VFDRSAENAVHKASPLPVPKDKELSAK 266
Query: 258 SWRNITLFFVP 268
+++ F P
Sbjct: 267 EFKSFKFLFDP 277
>gi|113460834|ref|YP_718901.1| TonB protein [Haemophilus somnus 129PT]
gi|112822877|gb|ABI24966.1| outer membrane transport energization protein TonB [Haemophilus
somnus 129PT]
Length = 250
Score = 61.1 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 31/244 (12%), Positives = 58/244 (23%), Gaps = 24/244 (9%)
Query: 4 ENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQ 63
G S++ H + P S D I E V
Sbjct: 7 WFGFFFSLVFHSALIGGF-----FWFTKPDDSANGYSADLIGTEISMEMLMG---MVVDD 58
Query: 64 FKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPY 123
K D V E + + + E ++ E+ K+ P
Sbjct: 59 SKPEPVAEPEPDPVVTEVVADPTIKPEPEKKLKEPEKPKDKPKEKPKKKPKERTKQKQPK 118
Query: 124 DKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVR 183
D K + + + + + + + +R
Sbjct: 119 DLPKGDRDIDSNDKVNSQAMGLGGVTTSNPNLIGTGNSTDE----------VAAYKSALR 168
Query: 184 NRVIANWNIPSDFK-RFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKA 242
+ + P K K+ V + F + G + G + L + A A
Sbjct: 169 REIERHKRYPQRAKMMRKQGIVTVSFAIGTDGSLSQISIAKSSGSED-----LDKAALSA 223
Query: 243 VIKS 246
V +
Sbjct: 224 VQSA 227
>gi|291279841|ref|YP_003496676.1| hypothetical protein DEFDS_1460 [Deferribacter desulfuricans SSM1]
gi|290754543|dbj|BAI80920.1| hypothetical protein [Deferribacter desulfuricans SSM1]
Length = 290
Score = 61.1 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 35/275 (12%), Positives = 74/275 (26%), Gaps = 32/275 (11%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPV 61
+L + IS+++H+ ++ + N VP+ +++ L VD I + + K K + +
Sbjct: 4 KLTIFIIISLLIHLAVIVFVKIN-----KVPMKKQKPLYVDIIKKKKPVTKKEIKKKPDI 58
Query: 62 -------------------VQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSS 102
L + K +
Sbjct: 59 LSEKEKIFKKKGKIEKKQGEIVSKKESIPLKPQKKKESKKIIPKQSEKKKTVQKGITTKE 118
Query: 103 SSKGEQALKESALLRMPVSPYDKQKISKATN--KEQDLQGISFAEKKSIDTVVVRPDKKE 160
K +K + +K + + I + +
Sbjct: 119 IKKENNKKTVIKKKIKEKKVEEKSEQTKKNEVISDDKVARILNPQDIISKYAYPSDKGSK 178
Query: 161 LLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIP-SDFKRFKKLRVKMHFQLNQKGFVLGK 219
S + R+ W+ P S ++ VK+ F + + G +
Sbjct: 179 EGEDDVDVSMMKFKYASYFKKFERRLYQVWHYPKSSAMNGEEGTVKVKFTILKDGTITNI 238
Query: 220 INVDVVGGTELVRRMLRENARKAVIKSQAFRLSPS 254
+ G L + A KA+ + L S
Sbjct: 239 RVIRSSG-----YPALDKEAVKALKTMKGVPLPES 268
>gi|145628572|ref|ZP_01784372.1| TonB [Haemophilus influenzae 22.1-21]
gi|144979042|gb|EDJ88728.1| TonB [Haemophilus influenzae 22.1-21]
Length = 262
Score = 61.1 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 35/257 (13%), Positives = 82/257 (31%), Gaps = 13/257 (5%)
Query: 12 ILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQEN 71
I+H + + + +N+N S + +S +I E ++ + +
Sbjct: 16 IVHGIVIGFILWNWNEPSDSANSAQGDIS-TSISMELLQGMVLEEPAPEPEDVQKEPEPE 74
Query: 72 LVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKA 131
V+ E + D T + + + ++ + K+ I+K
Sbjct: 75 NVQKEPEPEKQEIVEDPTIKPEPKKIKEPEKEKPKPKEKPKNKPKKEVKP--QKKPINKE 132
Query: 132 TNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWN 191
K + S T ++ +S + +R + ++
Sbjct: 133 LPKGDENIDSSANVNDKASTTSAANSNAQVAGSGTDTSEIAA----YRSAIRREIESHKR 188
Query: 192 IPSDFKR-FKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFR 250
P+ K K+ +V + F + G + G G L + A A+ S++
Sbjct: 189 YPTRAKIMRKQGKVSVSFNVGADGSLSGAKVTKSSGD-----ESLDKAALDAINVSRSVG 243
Query: 251 LSPSTYKSWRNITLFFV 267
P+ + S ++ + F
Sbjct: 244 TRPAGFPSSLSVQISFT 260
>gi|87198417|ref|YP_495674.1| hypothetical protein Saro_0392 [Novosphingobium aromaticivorans DSM
12444]
gi|87134098|gb|ABD24840.1| Cell division and transport-associated protein TolA
[Novosphingobium aromaticivorans DSM 12444]
Length = 368
Score = 61.1 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 19/118 (16%), Positives = 40/118 (33%), Gaps = 6/118 (5%)
Query: 155 RPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKG 214
++ + ++ +W +P + + L + + LN+ G
Sbjct: 247 GAQTSGTARTPPAAAIGPAVQSALAGSISRQLKPHWVVPQGVE-TEALVTVLSWSLNRDG 305
Query: 215 FVLGKI-NVDVVGGTELVRRMLR---ENARKAVIKSQAFRLSPSTYKSWRNI-TLFFV 267
+ G V G T+ R E A +AV + F L + +W+ + + F
Sbjct: 306 SLAGSPQVVRQEGITDANRAQAARHAEQAIRAVQLAAPFNLPAEYHDAWKRVASFRFD 363
>gi|325123554|gb|ADY83077.1| periplasmic protein TonB [Acinetobacter calcoaceticus PHEA-2]
Length = 294
Score = 61.1 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/273 (10%), Positives = 93/273 (34%), Gaps = 14/273 (5%)
Query: 5 NGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQF 64
++++LH +F+LL++F ++ +S+ + + + ++
Sbjct: 23 AATILAILLH-IFVLLIHFAMPSPSEQ-STKEIAISIRPSNEPVHQADFLAQADQQGSGA 80
Query: 65 KGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYD 124
+ + N D + +R + + + + + +
Sbjct: 81 FREAHRTSSDTPNPMLNDASTGDTELESLQKIHQQRELKFEEKVLMTVLSWQKQADASQR 140
Query: 125 KQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRN 184
+++ + ++ Q + + + +++ + V+ K+ S + R
Sbjct: 141 NKELEQLQSQFQAKAAMVASLEAQYLQRQQDFSRQQKIKTVDGIQAKKDASAIYLDKFRE 200
Query: 185 RVIANWNIPSDFKRFKK---LRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARK 241
+V N + ++ V++ LN +G + ++ G + +L E A+
Sbjct: 201 KVELYGNRYYPEEAKQQQLRGEVRLMVILNAQGGIRAIRLLESSGHS-----ILDEAAKS 255
Query: 242 AVIKSQAFRLSPSTYKSWRNITLF----FVPSK 270
+V + F + K + + F P++
Sbjct: 256 SVRRGAPFGHFDANMKDISELRIVRTWRFDPAE 288
>gi|311694927|gb|ADP97800.1| Tol-Pal system, TolA [marine bacterium HP15]
Length = 326
Score = 61.1 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 39/332 (11%), Positives = 102/332 (30%), Gaps = 74/332 (22%)
Query: 7 LAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP------ 60
+A+S+ LH++ L + ++ +S I ++ S + +
Sbjct: 1 MALSVTLHLLILGIALAGWSWTSTDHEPPPRSISARLITQQEPEPSPVVEPVDQQKRDEE 60
Query: 61 ------------------------VVQFKGSSQENL----------------------VR 74
Q + Q+ L
Sbjct: 61 RRAEEQRRKEEAERQRQEEEARRIAEQKRQEEQKRLQQQKEQERQEAEAKEREARKAREA 120
Query: 75 DFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNK 134
+ + Q+ ++ + A E + ++ + + + K + ++++ + +
Sbjct: 121 EAARQKAEAEAKERARQKAEEEKRRQEEAKRKAEEEKRRQEEQRKREEAERKRQEELARQ 180
Query: 135 EQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKR------------IPSQDAIAIV 182
E + + + K + + + + + E ++ S+ A++
Sbjct: 181 EAERKRLEAERKLREQQLEAQAEAAQRAREEESRRQREAAAAKAREAQMLSESEKYQALI 240
Query: 183 RNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKA 242
R R+ W PS +++ ++ L G + G V G T +A A
Sbjct: 241 RERLSQAWYPPSSA--TEEMTARLQITLLPTGELAGVRLVSSSGNT-----AFDNSALGA 293
Query: 243 VIKSQAFRLS--PSTYKS-WRNITLFFVPSKM 271
V + + T++ +R T+ F P ++
Sbjct: 294 VRSLSRYPIPNDRDTFERYFRQFTIEFNPRRL 325
>gi|307545155|ref|YP_003897634.1| TonB-like protein [Halomonas elongata DSM 2581]
gi|307217179|emb|CBV42449.1| TonB-like protein [Halomonas elongata DSM 2581]
Length = 382
Score = 61.1 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 21/124 (16%), Positives = 35/124 (28%), Gaps = 11/124 (8%)
Query: 151 TVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQL 210
+ + + + + I +VR V W IP + + +L
Sbjct: 264 QNSLDRAIAGEAEAAANAEQAQQAANGFINLVRQAVEQAWVIPPNV--GNNANALVAIRL 321
Query: 211 NQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAF----RLSPSTYKSWRNITLFF 266
G V G + A +AV + F L S + +R L F
Sbjct: 322 GPSGEVFSASIARSSGNS-----AFDRAAIQAVESAAPFSELRELPASVQRDYREFNLNF 376
Query: 267 VPSK 270
P
Sbjct: 377 RPGD 380
>gi|254420827|ref|ZP_05034551.1| TonB family C-terminal domain protein [Brevundimonas sp. BAL3]
gi|196187004|gb|EDX81980.1| TonB family C-terminal domain protein [Brevundimonas sp. BAL3]
Length = 211
Score = 61.1 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 20/129 (15%), Positives = 40/129 (31%), Gaps = 8/129 (6%)
Query: 142 SFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFK-RFK 200
P + +S + ++ + V P + + +
Sbjct: 86 PDPAPHDATPSAASPSESPGDGNDIAASAVTGGAAPYRDLLLSHVRRYREYPLEARLQRA 145
Query: 201 KLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPSTYKSWR 260
+ ++ F L+++G V D G L E A A+ ++ F P T +
Sbjct: 146 EGTARVRFILDREGRVQRVWLDDSSGHDS-----LDEAALAAIRRADPFPPPPRTASPYI 200
Query: 261 NITL--FFV 267
+I L F
Sbjct: 201 DIILPISFD 209
>gi|189426711|ref|YP_001953887.1| TonB family protein [Geobacter lovleyi SZ]
gi|189422970|gb|ACD97367.1| TonB family protein [Geobacter lovleyi SZ]
Length = 244
Score = 60.7 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 39/246 (15%), Positives = 75/246 (30%), Gaps = 26/246 (10%)
Query: 9 ISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSS 68
IS+ LHV L ++ L + +S+D P Q
Sbjct: 10 ISLGLHVGLLCVVLLFAGSAL----TSVPPISIDFT---------LATTTMPERQQGAQQ 56
Query: 69 QENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKI 128
+ ++ + S Q K + Q + +A V P D Q +
Sbjct: 57 RADIQPQQPQKPANQPVSAQPKPVQQK------QLQTTPQTVAAAAPHTAAVMPPDTQAV 110
Query: 129 SKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIA 188
+ + A +V + +++R +Q +R+ +++
Sbjct: 111 NAVSESSSGTPTARGAANIVTHSVSQPAVISSGGTVSSGQAQQRYRAQHFTY-IRDLIMS 169
Query: 189 NWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQ 247
+ P +R RV + F + + G V + G T +L +A + V
Sbjct: 170 HLTYPQLARRRGWSGRVVLAFVVAEDGSVRSIHVKEGSGHT-----LLDNSAVETVKGVA 224
Query: 248 AFRLSP 253
F P
Sbjct: 225 PFPKPP 230
>gi|88810553|ref|ZP_01125810.1| TolA protein, putative [Nitrococcus mobilis Nb-231]
gi|88792183|gb|EAR23293.1| TolA protein, putative [Nitrococcus mobilis Nb-231]
Length = 308
Score = 60.7 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 40/304 (13%), Positives = 88/304 (28%), Gaps = 48/304 (15%)
Query: 7 LAISMILHVMF----LLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
+ S+ +H + +L F+ S + + +V + + +
Sbjct: 11 VGCSLAVHAIVLLLLILSFSFSPTPPPTPIPSSQAIQAVAIDEQAVQTEIQRMQAQNQKQ 70
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENE-----------TKRSSSSKGEQALK 111
Q + + + + + Q R Q E + + + + A
Sbjct: 71 QSSKTQKMAQLEEQTRQLEQQRTQKQRALTELEKQREQLQQRQQSLAAQHEAEQQRLAKL 130
Query: 112 ESALLRMPVSPYDKQKISKATNKEQDLQ------------------------GISFAEKK 147
++ R +++K T + + + +
Sbjct: 131 KAQRARTEQQLAEQRKQQAKTEAQAEERRRQEQKKAQEAAAEAERKAEQQRLAREKQRET 190
Query: 148 SIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMH 207
+ E + + + D I ++ V NW P R L +H
Sbjct: 191 QRREAALERKLAEEAAARAHARKVAAAKNDYIPAIQRNVTQNWLRPVGIPR--GLSCVIH 248
Query: 208 FQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLS--PSTYKSWRNITLF 265
++ G VL V G T +A AV K+ + P+ ++R+++
Sbjct: 249 VRMGAGGIVLDARVVQSSGNT-----AFDHSAETAVRKASPLPVPNDPAIAAAFRDLSFE 303
Query: 266 FVPS 269
F PS
Sbjct: 304 FQPS 307
>gi|170717319|ref|YP_001784430.1| TonB family protein [Haemophilus somnus 2336]
gi|168825448|gb|ACA30819.1| TonB family protein [Haemophilus somnus 2336]
Length = 250
Score = 60.7 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/244 (12%), Positives = 59/244 (24%), Gaps = 24/244 (9%)
Query: 4 ENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQ 63
G S++ H + P S D I E V
Sbjct: 7 WFGFFFSLVFHSALIGGF-----FWFTKPDDSANGYSADLIGTEISMEMLMG---MVVDD 58
Query: 64 FKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPY 123
K D V E + + + E ++ E+ K+ P
Sbjct: 59 SKPEPVAEPEPDLVVTEVVADPTIKPEPEKKLKEPEKPKDKPKEKPKKKPKERTKQKQPK 118
Query: 124 DKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVR 183
D K + + + + + + + + +R
Sbjct: 119 DLPKGDRDIDSDDKVNSQAMGLGGVTTSNPNLIGTGNSTDE----------VAAYKSALR 168
Query: 184 NRVIANWNIPSDFK-RFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKA 242
+ + P K K+ V + F + G + G + L + A A
Sbjct: 169 REIERHKRYPQRAKMMRKQGIVTVSFAIGADGSLSQISIAKSSGSED-----LDKAALSA 223
Query: 243 VIKS 246
V +
Sbjct: 224 VQSA 227
>gi|15603053|ref|NP_246125.1| TonB [Pasteurella multocida subsp. multocida str. Pm70]
gi|18203678|sp|Q9ZH79|TONB_PASMU RecName: Full=Protein tonB
gi|33318341|gb|AAQ05039.1|AF468825_3 TonB [Pasteurella multocida]
gi|3978235|gb|AAC83227.1| TonB [Pasteurella multocida]
gi|12721539|gb|AAK03272.1| TonB [Pasteurella multocida subsp. multocida str. Pm70]
Length = 256
Score = 60.7 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 33/263 (12%), Positives = 69/263 (26%), Gaps = 20/263 (7%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
G AIS++ H F+ LY + + D I + E
Sbjct: 10 GFAISLLFHASFVSFLY----WIVQKDDDSANGFAADIISTHISMEMLAATVLEEPEPEP 65
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
+ + + +E D E + + + + + D
Sbjct: 66 EPAPPVVEPELPKEEVADPTVKPEPPKEPEKPKEPEKPKEKPKEKPKEKPKKPKKEQRDL 125
Query: 126 QKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNR 185
K + + + + K + + +R
Sbjct: 126 PKSDRQIDSNSSINQQATTTGNITTNNPNLVGKGNSTDE----------VNAYRSALRRE 175
Query: 186 VIANWNIPSDFK-RFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVI 244
+ + P+ + K+ V + F LN G + G E L A AV
Sbjct: 176 IEKHKRYPNRARMMRKQGVVTITFHLNNAGVISNARISKSSGSEE-----LDNAALVAVN 230
Query: 245 KSQAFRLSPSTYKSWRNITLFFV 267
++ P+ + ++ + F
Sbjct: 231 NARPIGPLPAGMPNEVSVPVSFR 253
>gi|78222374|ref|YP_384121.1| TonB-like [Geobacter metallireducens GS-15]
gi|78193629|gb|ABB31396.1| TonB-like protein [Geobacter metallireducens GS-15]
Length = 297
Score = 60.7 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/263 (11%), Positives = 61/263 (23%), Gaps = 26/263 (9%)
Query: 14 HVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLV 73
HV L+ P+ R+E + +D D + V+ + +
Sbjct: 21 HVGLFALIIL---YPQAKPVLRQEPIMIDLEDIPDLRQAPMPTDSRREVRRQAEQPRRVP 77
Query: 74 RDFSV------------QENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVS 121
R+ + + R G A
Sbjct: 78 REMAPRGDRERDRIASLPPVAKPIPSRPAVPYQAAPQPRRGEGVGPSATNGRTGEIPVRE 137
Query: 122 PYD-----KQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQ 176
K + S + L + K ++ + + I
Sbjct: 138 APRGGGILKPRASAEAPELAQLMPSAQRLAKIEESYRKKYRDDVADGDTKFLDTDDIQFG 197
Query: 177 DAIAIVRNRVIANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRML 235
+ N + W P + R + + N+ G ++ + G R+L
Sbjct: 198 SFLRRFENAIYGVWRYPQEAARLGIEGVTPVKITFNRSGVIVKYEILQSSGS-----RIL 252
Query: 236 RENARKAVIKSQAFRLSPSTYKS 258
+ + + P Y
Sbjct: 253 DDEVLRTLRMVGPVGPFPRGYDR 275
>gi|262377256|ref|ZP_06070480.1| TonB family protein [Acinetobacter lwoffii SH145]
gi|262307709|gb|EEY88848.1| TonB family protein [Acinetobacter lwoffii SH145]
Length = 295
Score = 60.7 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 34/273 (12%), Positives = 88/273 (32%), Gaps = 14/273 (5%)
Query: 7 LAISMILHVMFLLLLYFNFNVQLLVPIS-RREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
+ S +L L L+ + + + ++V ++ +
Sbjct: 22 VFSSAVLAAGILHLIVLTLEFGMPQDLDTSTKEIAVSLRQTDEKIEHADFLAQTDQQGSG 81
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
+ + + ++ + + + + ++ S E+ L + + +
Sbjct: 82 QFREAHRMSSDMPSPLMEQQAGEELEKSLDMLQQQQQLSFEEKVLMTTLSWQKQAEENQR 141
Query: 126 QKISKATNKE-QDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRN 184
+K+ + + Q + + + +++ + V+ K+ S + R
Sbjct: 142 KKMQEQLQSQFQAKAAMVASLEAQYLQRQQNFSRQQKIKTVDGIQAKQDVSAAYLEKFRE 201
Query: 185 RVIANWNIPSDFKRFKK---LRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARK 241
+V N ++ V++ LNQ G + +D G ML E A+
Sbjct: 202 KVEFYGNRYYPEAAKQQNLAGEVRLMVILNQNGGIRAIRLIDSSGHA-----MLDEAAKA 256
Query: 242 AVIKSQAFRLSPSTYKSWRNITLF----FVPSK 270
+V K+ F S K + + F P++
Sbjct: 257 SVRKAAPFGAFDSKMKEISELRVIRTWRFDPAE 289
>gi|160877476|ref|YP_001556792.1| TonB family protein [Shewanella baltica OS195]
gi|160862998|gb|ABX51532.1| TonB family protein [Shewanella baltica OS195]
gi|315269680|gb|ADT96533.1| TonB family protein [Shewanella baltica OS678]
Length = 268
Score = 60.7 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 26/250 (10%), Positives = 74/250 (29%), Gaps = 16/250 (6%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
L ++ LH+ ++ ++ ++ P + + + I + +
Sbjct: 16 ALLLAAFLHIALTAAVF--WSPAVITPTGQAKAVGNGGIEISLGPAGSAASALQQTTAPV 73
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
+ + + + + T + K + + ++ +S + SP +
Sbjct: 74 AEQKSEPITEQLDKPEPLPPVAKKVTPTPRPKPKPITPTPQDELTTQSEVNEQHSSPTET 133
Query: 126 QKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNR 185
+ ++ + + +QD A +
Sbjct: 134 PSPTALAASANEVGQSGEGHSAEQNKAASGDNMTGGG--------LLGDTQDYTATLLAW 185
Query: 186 VIANWNIPSDFK-RFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVI 244
+ + P + R ++ V ++F L+++G V G + L A K +
Sbjct: 186 LEQHKEYPRTARNRRQQGTVMLYFVLDRQGRVSASRIEQSSG-----YQTLDAEALKMLE 240
Query: 245 KSQAFRLSPS 254
++Q P
Sbjct: 241 RAQPLPAIPD 250
>gi|238754710|ref|ZP_04616062.1| TonB domain protein [Yersinia ruckeri ATCC 29473]
gi|238707018|gb|EEP99383.1| TonB domain protein [Yersinia ruckeri ATCC 29473]
Length = 282
Score = 60.7 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 33/258 (12%), Positives = 76/258 (29%), Gaps = 24/258 (9%)
Query: 1 MRLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP 60
M L +S+ LH L + I S+ ++ + E
Sbjct: 20 MFLSFSWLLSLALHFCALW-------FLAMRTIPPLPTDSLTSVVISLSTEIAFTPSLEQ 72
Query: 61 VVQFKGSSQENLVRDFSVQ---ENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLR 117
+ + E + + ++T A K K ++ +K ++
Sbjct: 73 YQLGVEQELAVAASESPPELFNEVIESLPEVSQTDALLLVVKEKPKQKPKEVIKPQKNVK 132
Query: 118 MPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQD 177
K + ++ T + S + V + L + +
Sbjct: 133 ASWREAAKPQENQETEIQTASMSNSSPLSGTQQRVAAPINSHSLNNSQTR--------AT 184
Query: 178 AIAIVRNRVIANWNIPSDFKRFKK-LRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLR 236
IAI+++ + P + ++ + F ++ +G VL + G +L
Sbjct: 185 WIAILQSHLANFKRYPPGVRNKQRKGTAIIKFSIDSEGRVLSAMLAGSSGS-----PLLD 239
Query: 237 ENARKAVIKSQAFRLSPS 254
A + ++Q P+
Sbjct: 240 SEALAMLKRAQPLPKPPA 257
>gi|330861655|emb|CBX71833.1| hypothetical protein YEW_AP03130 [Yersinia enterocolitica W22703]
Length = 275
Score = 60.7 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/256 (10%), Positives = 68/256 (26%), Gaps = 6/256 (2%)
Query: 1 MRLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP 60
+R G I + + ++ L + V + S++ + +
Sbjct: 3 IRQSKGSVIFFWVSALLTSGVHIYLIWLLSNTTTPPAYTEVSPVAIMIAVSTEPEFTQHM 62
Query: 61 VVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPV 120
+N+ + A E+ + ++
Sbjct: 63 EQDSVVGITQNINEPVTELSEHQPEVVSHILAAPEHSNAALIVEREVNEPQKELNKAKRP 122
Query: 121 SPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIA 180
+ + Q A T + + + S + + +
Sbjct: 123 QQKVMTPRQPINERTPENQSNPSAPAVVTSTPLSGESHRVAAAANSHSLHNQQSKMNWKS 182
Query: 181 IVRNRVIANWNIPSDFK-RFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENA 239
++ + P + + ++ V + F +N++G VL V G L + A
Sbjct: 183 RLQGHLAGFKRYPPRARKQRQQGTVIIRFVVNKEGDVLSTKLVKSSG-----VIALDQEA 237
Query: 240 RKAVIKSQAFRLSPST 255
V ++Q P+
Sbjct: 238 LAVVKRAQPLPQPPAG 253
>gi|83950277|ref|ZP_00959010.1| hypothetical protein ISM_04245 [Roseovarius nubinhibens ISM]
gi|83838176|gb|EAP77472.1| hypothetical protein ISM_04245 [Roseovarius nubinhibens ISM]
Length = 312
Score = 60.7 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/232 (11%), Positives = 58/232 (25%), Gaps = 8/232 (3%)
Query: 27 VQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFS 86
+ + + + + P + Q V + Q
Sbjct: 74 ALVPPTPVETPVEQPQEVQERSEEQPEMAQPVTPALTPSHDPQRATVLTPAPQMAAPVLP 133
Query: 87 DQTKTHATENETK---RSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISF 143
+T E + R E+ K + P ++ K K +
Sbjct: 134 QETVEAQDEVAPQSSVRPKQRTREEPPKPQKTAKTPAPKTPVKQAPKPQKKAASAPQGNA 193
Query: 144 AEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLR 203
+ + R K V + + R + +V+ + S + ++
Sbjct: 194 KQNARAGSATGREGAKAAQQGVAQGQKNREAGNARASNYPGQVMKKLSRVSRPRVGRRGT 253
Query: 204 VKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPST 255
+ F + G + G E L A + V ++ F P
Sbjct: 254 AVVAFTIAPNGRLAAVSIAKSSGHAE-----LDRAALRVVQRAAPFPPPPQG 300
>gi|300115246|ref|YP_003761821.1| TonB family protein [Nitrosococcus watsonii C-113]
gi|299541183|gb|ADJ29500.1| TonB family protein [Nitrosococcus watsonii C-113]
Length = 296
Score = 60.7 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/259 (9%), Positives = 66/259 (25%), Gaps = 24/259 (9%)
Query: 13 LHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENL 72
H +LLL + L + + + + K + +E
Sbjct: 19 FHG--ILLLGLDELKFFPPSTPTPLPLEIILVPFKQEEAPKKPTPLTQTNRIDKDEKEEK 76
Query: 73 VRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESA--------------LLRM 118
+ Q + T + + + K++A
Sbjct: 77 HPPAPEAPSPLATPPQVHSTPTIQPAPTAPAKQRRPPPKQAAGPPLLTQKQVTLATSKPQ 136
Query: 119 PVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDA 178
+ ++ + + + A + ++ + + SS +
Sbjct: 137 QLPALTSPEVPETISPPRPSARELIAALEGQLAREIQRYANQPRKRHLDSSTTEYAATAY 196
Query: 179 IAIVRNRVIANWNIPSDFKRFKKL---RVKMHFQLNQKGFVLGKINVDVVGGTELVRRML 235
+ R ++ + + ++ + + LN G V + G + L
Sbjct: 197 LDAWRKKIERVGRMNYPEEAKRRGLSGSLILVVDLNPNGTVANIVMRHSSG-----HQAL 251
Query: 236 RENARKAVIKSQAFRLSPS 254
+ A + V + F P
Sbjct: 252 DKAAIRIVRLAAPFANVPD 270
>gi|113867679|ref|YP_726168.1| hypothetical protein H16_A1671 [Ralstonia eutropha H16]
gi|113526455|emb|CAJ92800.1| hypothetical membrane associated protein [Ralstonia eutropha H16]
Length = 250
Score = 60.7 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 20/182 (10%), Positives = 40/182 (21%), Gaps = 8/182 (4%)
Query: 70 ENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKIS 129
E + + + + + + + + +
Sbjct: 54 EAIPEAATPAPAITPAPSPKPVEEEDADISLQEKQRKAEQAARDQAQARQRENQARAEAA 113
Query: 130 KATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVE-KSSRKRIPSQDAIAIVRNRVIA 188
+ + + + A+ + R + S S PS VR RV
Sbjct: 114 RKEAQRKATEAQRQADNAQRQGELARLRSQAGNSGTRVGSGSGTKPSSGYAERVRQRVKP 173
Query: 189 NWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQA 248
N D + + G VL G +AV +S
Sbjct: 174 NIIFNEDVSG--NPAAVVAVGMAPDGSVLSTRLAKSSGNA-----AWDNAVLRAVQRSDP 226
Query: 249 FR 250
Sbjct: 227 LP 228
>gi|332290366|ref|YP_004421218.1| transport protein TonB [Gallibacterium anatis UMN179]
gi|330433262|gb|AEC18321.1| transport protein TonB [Gallibacterium anatis UMN179]
Length = 243
Score = 60.7 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 20/181 (11%), Positives = 55/181 (30%), Gaps = 6/181 (3%)
Query: 87 DQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEK 146
+ K + + + +K+ + + + K K +D +
Sbjct: 65 TEIKPEPEKIVETQKQEVVPDPTIKKESKQPKKEIKKEVVERKKEHKKHRDHKKNHRPVS 124
Query: 147 KSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFK-KLRVK 205
+++ + ++ + + +R + + K + V
Sbjct: 125 QAVQSKAQGAPVTTQQQNLQGTGASSDELAAYRSALRREIEKHKRYSQRAKMLHRQGTVI 184
Query: 206 MHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPSTYKSWRNITLF 265
+ F L G + G + L ++A AV K+ + + P+ + + I +
Sbjct: 185 VQFTLMDDGTIQNVRLHRSSGYED-----LDKSAMDAVAKANSVGIRPAGLATEQKIPIK 239
Query: 266 F 266
F
Sbjct: 240 F 240
>gi|146284267|ref|YP_001174420.1| TonB domain-containing protein [Pseudomonas stutzeri A1501]
gi|145572472|gb|ABP81578.1| TonB protein, C-terminal domain [Pseudomonas stutzeri A1501]
Length = 317
Score = 60.7 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/245 (11%), Positives = 69/245 (28%), Gaps = 17/245 (6%)
Query: 26 NVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQE----NLVRDFSV-QE 80
L P + L + + K Q + E + + Q+
Sbjct: 60 GFTLSEPKQISKTLEITLSTFKSEEKPKDADFLAQDNQQGSGTLEHKASPKTTEQAPFQD 119
Query: 81 NGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQG 140
R + + + ++ ++ + + S L
Sbjct: 120 TEVRKVTPPAAPPPSTRPEPAKTVVTTRSPQQQKAEVKQQTQPQPEPQSAPAFDSSQLSA 179
Query: 141 ISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFK 200
+ + + V R K+ +S+ ++ R S R +V N+ + +
Sbjct: 180 EIASLEAELAKDVERYAKRPRVSRQNSAATMRDISAWYRDEWRKKVERIGNLNYPDEARR 239
Query: 201 K---LRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRL----SP 253
+ ++M +N+ G V ++ G + +L + A + V + F
Sbjct: 240 QQIYGSLRMLVTINRDGTVQELRVIESSG-----QPVLDDAALRIVRLAAPFAPFTGELA 294
Query: 254 STYKS 258
Y
Sbjct: 295 QKYDQ 299
>gi|171060651|ref|YP_001793000.1| TonB family protein [Leptothrix cholodnii SP-6]
gi|170778096|gb|ACB36235.1| TonB family protein [Leptothrix cholodnii SP-6]
Length = 296
Score = 60.3 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/249 (11%), Positives = 69/249 (27%), Gaps = 10/249 (4%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
L+ L +S+ +H L + + + + L V + + + ++
Sbjct: 16 LQVALLVSLAVHAALLTVRFVDPEGLRRILEDTP--LEVVLVNSSSATAPPNAQVIAQRN 73
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
G + + + + + + A + L +
Sbjct: 74 LAGGGDAAQGRATSPLPPMPTTQAGDSFEDTRQQIAQLQAQQMLLLAQVKRELASLSTPE 133
Query: 123 YDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIV 182
+ E+ + A I+ + + + + V ++R +
Sbjct: 134 QRQSGNPTLRPAEEQRRRQLLALLAQIEKRIQQENARPRRRFVSPAAR-EGVHALYYDSL 192
Query: 183 RNRVIANWNIPSDFKRFKKL--RVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENAR 240
R RV +KL + M + G V+ V G ++L + A
Sbjct: 193 RQRVEDVGTRNFPEVNGRKLYGELTMLVAVGGSGEVVEADIVQSSGN-----KVLDKRAL 247
Query: 241 KAVIKSQAF 249
V + +
Sbjct: 248 TIVRGAAPY 256
>gi|153873568|ref|ZP_02002109.1| TolA protein [Beggiatoa sp. PS]
gi|152069969|gb|EDN67894.1| TolA protein [Beggiatoa sp. PS]
Length = 60
Score = 60.3 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 13/64 (20%), Positives = 25/64 (39%), Gaps = 5/64 (7%)
Query: 206 MHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPSTYKSWRNITLF 265
+ +L + G + I G +AR+AV +S + + ++R+ T
Sbjct: 2 VEIRLKRGGKIKSAIIQKSSGNG-----AFDNSARQAVYRSSPLPIPNKVFDTFRHFTFT 56
Query: 266 FVPS 269
F P
Sbjct: 57 FYPK 60
>gi|327482650|gb|AEA85960.1| TonB domain-containing protein [Pseudomonas stutzeri DSM 4166]
Length = 297
Score = 60.3 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 29/245 (11%), Positives = 69/245 (28%), Gaps = 17/245 (6%)
Query: 26 NVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQE----NLVRDFSV-QE 80
L P + L + + K Q + E + + Q+
Sbjct: 40 GFTLSEPKQISKTLEITLSTFKSEEKPKDADFLAQHNQQGSGTLEHKASPKTTEQAPFQD 99
Query: 81 NGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQG 140
R + + + ++ ++ + + S L
Sbjct: 100 TEVRKVTPPAAPPPSTRPEPAKTVVTTRSPQQQKAEVKQQTQPQPEPQSAPAFDSSQLSA 159
Query: 141 ISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFK 200
+ + + V R K+ +S+ ++ R S R +V N+ + +
Sbjct: 160 EIASLEAELAKDVERYAKRPRVSRQNSAATMRDISAWYRDEWRKKVERIGNLNYPDEARR 219
Query: 201 K---LRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRL----SP 253
+ ++M +N+ G V ++ G + +L + A + V + F
Sbjct: 220 QQIYGSLRMLVTINRDGTVQELRVIESSG-----QPVLDDAALRIVRLAAPFAPFTGELA 274
Query: 254 STYKS 258
Y
Sbjct: 275 QKYDQ 279
>gi|187927779|ref|YP_001898266.1| protein TolA [Ralstonia pickettii 12J]
gi|187724669|gb|ACD25834.1| protein TolA [Ralstonia pickettii 12J]
Length = 342
Score = 60.3 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 37/331 (11%), Positives = 81/331 (24%), Gaps = 72/331 (21%)
Query: 5 NGLAISMILHVMFLLLLYFNFNVQLLVP-------------------------ISRREML 39
++++ HV+ ++ LYF Q P + ++
Sbjct: 19 RAFGLAVLTHVLLIIFLYFGVQWQSSTPRGEEAELWDEAAVQQAVQQAAPVPEVKPEPVI 78
Query: 40 SVDNIYNEDYHSSKYKKIEEPVVQFKGS-----------------------SQENLVRDF 76
E+ ++ + Q + +E VR
Sbjct: 79 KAPPAKVEEEADIALEQQKRKREQEAAAAREAELVRRAAEERAEAQRQARLKEEQQVRQA 138
Query: 77 SVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQ 136
+Q + A + + + K Q ++ + ++++ E
Sbjct: 139 ELQRKALAEHQAKEKAAEKAAADAAQARKNAQLQAQAEAKAKAEADAKQKELKAKVAAEA 198
Query: 137 DLQGISFAEKKSIDTVVVRPDKKELLSK-----------------VEKSSRKRIPSQDAI 179
+ + + R + + L S
Sbjct: 199 KAKADAEHKANESRANAQRQAQLDRLRAMAGAGATGTVAGSGGGVGNAQGTGGTASAGYA 258
Query: 180 AIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENA 239
VR +V N + Q+ G +L K G E
Sbjct: 259 ERVRAKVKPNILFDPSAVN-GNPSAVVSVQMAPDGSILSKRLTKSSGNG-----AYDEAV 312
Query: 240 RKAVIKSQAFRLSPSTYKSWRNITLFFVPSK 270
+AV +S + K+ ++ L F P +
Sbjct: 313 MRAVERSDPLPRDTNG-KAPSSVILTFRPKE 342
>gi|291326843|ref|ZP_06126064.2| outer membrane receptor-mediated transport energizer protein TonB
[Providencia rettgeri DSM 1131]
gi|291312812|gb|EFE53265.1| outer membrane receptor-mediated transport energizer protein TonB
[Providencia rettgeri DSM 1131]
Length = 248
Score = 60.3 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 33/263 (12%), Positives = 67/263 (25%), Gaps = 23/263 (8%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
+S+ LHV+ + L + L + ++ + +I +
Sbjct: 8 TFMLSITLHVLVIGYLTYVTAQSLSLKNQAQQDAPIISIALTQAVNVA------------ 55
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
E + HA K+ +
Sbjct: 56 --EPEEIPLPIDTPNEVKIAPSPIVEHAVIVAPKKQKKVIKTPKEPVKPKELTKRTENAH 113
Query: 126 QKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNR 185
+ + + + A K + + +S+ +R
Sbjct: 114 KPANTEIKNDLPIAQQQKAGALVSSQSAGIKGPKNQHATSDTNSQ---LINAYREKLRQE 170
Query: 186 VIANWNIPSDFKRFKK-LRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVI 244
V N P K+ K + F L+Q G + G L + A AV
Sbjct: 171 VERNKQYPRRAKKMKNRGIATIQFHLSQNGEISLIRLASSSGNDS-----LDQAALLAVQ 225
Query: 245 KSQAFRLSPSTYKSWRNITLFFV 267
KS++ P+ + + + F
Sbjct: 226 KSRSVGKPPAGFAQSITLNIEFN 248
>gi|220904133|ref|YP_002479445.1| protein TolA [Desulfovibrio desulfuricans subsp. desulfuricans str.
ATCC 27774]
gi|219868432|gb|ACL48767.1| protein TolA [Desulfovibrio desulfuricans subsp. desulfuricans str.
ATCC 27774]
Length = 323
Score = 60.3 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 27/251 (10%), Positives = 75/251 (29%), Gaps = 19/251 (7%)
Query: 27 VQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFS 86
V++ P +D K + + + + ++ +
Sbjct: 83 VEIKEPSPVPP------TPRQDAAPIKKPEPKPEPKPEPKPEPKPEATPVAAKKEEKQQK 136
Query: 87 DQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEK 146
+ + + ++ +QA K+ + + ++ + S
Sbjct: 137 QEKPKEPEKPKDQKKPEPPKQQARKDDKKTTQKPAEDPVAAALQQAKRKATSRADSGDRG 196
Query: 147 KSIDTVVVRPDKKELLSKVEKSSRKRIPSQD-----AIAIVRNRVIANWNIPSDFKRFKK 201
+++ + + K+ ++ + V V NW S
Sbjct: 197 NAVEQALAQAQKRAGGNRGGGGGEGDGAGGGGLGDVYMGQVMLAVRPNWGFAS--AGRLN 254
Query: 202 LRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIK-SQAFRLSPSTYKSWR 260
L + +++ +G V + G ++ +A AVI+ SQ+ P +
Sbjct: 255 LSCIVRVRVDMQGKVQQAVVSQGSGNSQ-----FDASAVNAVIRTSQSGDFPPPPSAEYC 309
Query: 261 NITLFFVPSKM 271
++ L F +++
Sbjct: 310 DLDLVFTLNEL 320
>gi|54297485|ref|YP_123854.1| hypothetical protein lpp1530 [Legionella pneumophila str. Paris]
gi|53751270|emb|CAH12681.1| hypothetical protein lpp1530 [Legionella pneumophila str. Paris]
Length = 332
Score = 60.3 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 30/231 (12%), Positives = 76/231 (32%), Gaps = 12/231 (5%)
Query: 42 DNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRS 101
+ ++ + ++ V + K +E + + + Q + A + E +
Sbjct: 109 EIARLKEEANKIAIARKKQVEEEKKRLKELAEQKALEAKRIEELKKQNEKLAKQRELEAK 168
Query: 102 SSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKEL 161
++ + +E + + K + + + ++
Sbjct: 169 KLAELNKKKQEEKEKAEKLKAEQAK---AEKLKAEQARAEQEKAEMERKRQAEAAAAQQA 225
Query: 162 LSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKIN 221
E+ +R A++ N + NW +P + L + +L G VL
Sbjct: 226 AQNAERQARIAGEVDKYKALIVNAIGRNWILPENV--DSSLSSQFRIRLAPDGTVLEVSL 283
Query: 222 VDVVGGTELVRRMLRENARKAVIKSQAFRLSPS--TYKSWRNITLFFVPSK 270
+ G +L +A+ A+ K+ + T+ +R+I+L P +
Sbjct: 284 IRSSGD-----PLLDRSAQTAIYKASPLPVPQDVETFNLFRDISLTVRPEQ 329
>gi|240851220|ref|YP_002972623.1| TolA protein [Bartonella grahamii as4aup]
gi|240268343|gb|ACS51931.1| TolA protein [Bartonella grahamii as4aup]
Length = 498
Score = 60.3 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 33/262 (12%), Positives = 72/262 (27%), Gaps = 16/262 (6%)
Query: 23 FNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQ---ENLVRDFSVQ 79
+ L P ++ S + + ++ + E ++ +
Sbjct: 232 VAPEMPLRAPEDTPKVASEMPLRAPEDTPKVAPEMPLKAPEDALKPAHKNEEMISPKELA 291
Query: 80 ENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQ 139
+ + H T + K + QK K K Q+ Q
Sbjct: 292 PTVQKVPAEQIVHQAPKITLPEKFFLPQFKPKFDEEFPRKNAAALNQKTPKLNKKNQEKQ 351
Query: 140 GISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRV-----------IA 188
I + ++ R + +K + ++ +
Sbjct: 352 TIEDILALEENNLLNRARSQGGGAKRSHTPEALGARKNIDDTTKMAQTLVNIAGGCIQQK 411
Query: 189 NWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQA 248
+ + V++ F L+++G V+G +D V G E + ++ AV Q
Sbjct: 412 LKLVALGGDLKNRPVVRLRFYLDREGMVMGDPIIDPVSGLESQQAIMIRQVYAAVFSCQP 471
Query: 249 F-RLSPSTYKSW-RNITLFFVP 268
+ L Y W + P
Sbjct: 472 YADLPRDQYDLWGQGFDFNVDP 493
Score = 44.5 bits (103), Expect = 0.014, Method: Composition-based stats.
Identities = 22/184 (11%), Positives = 54/184 (29%), Gaps = 10/184 (5%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
++ GLA+S+++HV+FL F + +P E + + D SS+ ++ P+
Sbjct: 9 MKRGLALSLVVHVIFLSWGAVQFTSSVSLPQPL-EAIPITLAPLVDELSSQQGSVKAPIR 67
Query: 63 QFKGSSQENLVRDFSVQEN---------GDRFSDQTKTHATENETKRSSSSKGEQALKES 113
++ + + +S ++ A + +
Sbjct: 68 AIPAVKPTMQPQEKEDARHIGEGQIDSLAPFQPKEKLRPVETASLPQSENTSETFAPELT 127
Query: 114 ALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRI 173
+ D K++ A K + P + ++
Sbjct: 128 KPELLEAKTEDTPKVAPEMPLSAPEDTPKVAPKIPLSAPEDTPKVAPEIPLSAPEDTPKV 187
Query: 174 PSQD 177
+
Sbjct: 188 APKM 191
>gi|146306308|ref|YP_001186773.1| TonB family protein [Pseudomonas mendocina ymp]
gi|145574509|gb|ABP84041.1| Cell division and transport-associated protein TolA [Pseudomonas
mendocina ymp]
Length = 326
Score = 60.3 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 30/316 (9%), Positives = 84/316 (26%), Gaps = 63/316 (19%)
Query: 10 SMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQ 69
++ LHV+ +L+ +F +P +R ++ + + + ++ + + +S
Sbjct: 19 AVGLHVLMFAMLFVSFAFTPELPPARP-VVQATLYQLQSQSQATTQTTQKVAGEAQKTSA 77
Query: 70 ENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKIS 129
+ Q+ + K++ K + +++ + + + + +
Sbjct: 78 PQFETERLEQKKAEEQKQAQAEAQKVAAAKKAEEQKKAEEARKAEQAKAEAAKKAEAEKA 137
Query: 130 KATNKEQ--------------------------------------------------DLQ 139
++ +
Sbjct: 138 AEQKRQADIAKKRAEEEAKKKAAEEAKKKAAAEDAKKKAAAAEAAKKKAAEDAKRKAEEA 197
Query: 140 GISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRF 199
AE + + + + + + ++ + NW P +R
Sbjct: 198 RRKAAEDQKAAALAELLSDNVQNQQALAETHGDKVAGNLDDLIIKLITENWQRPMSARR- 256
Query: 200 KKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFR----LSPST 255
+ V++ Q+ G V G +A AV L +T
Sbjct: 257 -GMSVELLIQMLPDGTVTNASVSRSSGDA-----PFDSSAVAAVRNVGRIPEMQQLDRAT 310
Query: 256 YKS-WRNITLFFVPSK 270
+ +R + F P
Sbjct: 311 FDRMYRQRRVIFKPED 326
>gi|77163900|ref|YP_342425.1| TonB-like protein [Nitrosococcus oceani ATCC 19707]
gi|254435251|ref|ZP_05048758.1| TonB family C-terminal domain protein [Nitrosococcus oceani AFC27]
gi|76882214|gb|ABA56895.1| TonB-like protein [Nitrosococcus oceani ATCC 19707]
gi|207088362|gb|EDZ65634.1| TonB family C-terminal domain protein [Nitrosococcus oceani AFC27]
Length = 300
Score = 60.3 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 29/255 (11%), Positives = 64/255 (25%), Gaps = 18/255 (7%)
Query: 13 LHVMFLLLL-YFNFNVQLLVPISRREMLSVDNIYNE-DYHSSKYKKIEEPVVQFKGSSQE 70
H + LL + F E++ V + + + + K
Sbjct: 25 FHGILLLGMDQLKFFPPPTPIPLPLEIILVPFKQEKIPKKPNVLAQAGKISKSEKEERHP 84
Query: 71 NLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISK 130
S R +K+ + AL + K +
Sbjct: 85 LAPSAPSPLAAPPRVPTSPAIQPAPAVSKQKLPPPKQTALSPLLTQKRATPSPSKPQQIP 144
Query: 131 ATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQD--------AIAIV 182
A+ + + S + + + RKR + +
Sbjct: 145 ASTSPEIPETTSPRPSARELIAALEGQLAREIQRYANQPRKRYLDSNTTEYAATAYLDAW 204
Query: 183 RNRVIANWNIPSDFKRFKKL---RVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENA 239
R ++ + + ++ + + LN G V + G + L + A
Sbjct: 205 RKKIERVGKMNYPEEAKRRGLSGSLILVVDLNPDGTVANIVVRHSSG-----HQALDKAA 259
Query: 240 RKAVIKSQAFRLSPS 254
+ V + F P+
Sbjct: 260 IRIVRLAAPFANIPA 274
>gi|91206273|ref|YP_538627.1| putative periplasmic colicin Js sensitivity protein CjrB
[Escherichia coli UTI89]
gi|191174362|ref|ZP_03035868.1| TonB family protein [Escherichia coli F11]
gi|218692811|ref|YP_002405923.1| periplasmic colicin Js sensitivity protein [Escherichia coli
UMN026]
gi|218711113|ref|YP_002418733.1| colicin Js sensitivity [Escherichia coli ED1a]
gi|237702597|ref|ZP_04533078.1| CjrB [Escherichia sp. 3_2_53FAA]
gi|256855276|ref|YP_003162520.1| TonB-dependent colicin J protein CjrB [Escherichia coli]
gi|293404677|ref|ZP_06648670.1| predicted protein [Escherichia coli FVEC1412]
gi|300895856|ref|ZP_07114435.1| protein, TonB family [Escherichia coli MS 198-1]
gi|301050096|ref|ZP_07197004.1| protein, TonB family [Escherichia coli MS 185-1]
gi|91075724|gb|ABE10604.1| putative periplasmic colicin Js sensitivity protein CjrB
[Escherichia coli UTI89]
gi|190905385|gb|EDV65018.1| TonB family protein [Escherichia coli F11]
gi|218349896|emb|CAQ87303.1| colicin Js sensitivity [Escherichia coli ED1a]
gi|218349974|emb|CAQ87388.1| periplasmic colicin Js sensitivity protein [Escherichia coli
UMN026]
gi|226903183|gb|EEH89442.1| CjrB [Escherichia sp. 3_2_53FAA]
gi|256275488|gb|ACU68761.1| TonB-dependent colicin J protein CjrB [Escherichia coli]
gi|281181638|dbj|BAI57967.1| conserved hypothetical protein [Escherichia coli SE15]
gi|291428389|gb|EFF01415.1| predicted protein [Escherichia coli FVEC1412]
gi|300298157|gb|EFJ54542.1| protein, TonB family [Escherichia coli MS 185-1]
gi|300360212|gb|EFJ76082.1| protein, TonB family [Escherichia coli MS 198-1]
gi|307629885|gb|ADN74188.1| TonB-dependent colicin J protein CjrB [Escherichia coli UM146]
gi|315293016|gb|EFU52368.1| protein, TonB family [Escherichia coli MS 153-1]
gi|323954132|gb|EGB49925.1| TonB family protein domain-containing protein [Escherichia coli
H263]
gi|324005289|gb|EGB74508.1| protein, TonB family [Escherichia coli MS 57-2]
gi|324015463|gb|EGB84682.1| protein, TonB family [Escherichia coli MS 60-1]
Length = 258
Score = 60.3 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 31/248 (12%), Positives = 67/248 (27%), Gaps = 28/248 (11%)
Query: 7 LAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKG 66
S++LH + L + F+ ++ + +
Sbjct: 17 FICSLLLHGLIFLAFIWRFSEVQPAMSPAPAIML-------QWAEIIEAPSSPLSLPVGI 69
Query: 67 SSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQ 126
+ QE+ V + Q + T+ E R S + K ++ D
Sbjct: 70 AQQESAVTEEKQQTEDRQQRPVTEDSDATIEITRKKKSSDGEKKKTRPPRKIKAQTSDSN 129
Query: 127 KISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRV 186
+ ++N S ++ + D E + V+ +
Sbjct: 130 PTAVSSNAAPQALVESSRIAAPFNSDSTKRDNSE---------------ASWESRVKGHL 174
Query: 187 IANWNIPSDFK-RFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIK 245
P D + R + + F +N +G ++ G L A + +
Sbjct: 175 NRYKRYPGDARKRARTGTAVVTFTVNTEGTIVSSFLEISSGT-----FSLDREAIAVLER 229
Query: 246 SQAFRLSP 253
+Q P
Sbjct: 230 AQPLPKPP 237
>gi|309972588|gb|ADO95789.1| TonB protein [Haemophilus influenzae R2846]
Length = 264
Score = 60.3 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 34/257 (13%), Positives = 80/257 (31%), Gaps = 11/257 (4%)
Query: 12 ILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQEN 71
I H + + + +N+N S + +S +I E ++ + +
Sbjct: 16 IAHGIIIGFILWNWNEPSDSANSAQGDIS-TSISMELLQGMVLEEPAPEPEDVQKELEPE 74
Query: 72 LVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKA 131
E + + T E + + + + ++ K+ I+K
Sbjct: 75 PENVQKEPEPEKQEIVEDPTIKPEPKKIKEPEKEKPKPKEKPKKKPKKEVKPQKKPINKE 134
Query: 132 TNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWN 191
K + S T ++ +S + +R + ++
Sbjct: 135 LPKGDENIDSSANVNDKASTTSAANSNAQVAGSGRDTSEIAA----YRSAIRREIESHKR 190
Query: 192 IPSDFKR-FKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFR 250
P+ K K+ +V + F + G + G G L + A A+ S++
Sbjct: 191 YPTRAKIMRKQGKVSVSFNVGADGSLSGAKVTKSSGD-----ESLDKAALDAINVSRSVG 245
Query: 251 LSPSTYKSWRNITLFFV 267
P+ + S ++ + F
Sbjct: 246 TRPAGFPSSLSVQISFT 262
>gi|317493084|ref|ZP_07951508.1| TonB family domain-containing protein [Enterobacteriaceae bacterium
9_2_54FAA]
gi|316919206|gb|EFV40541.1| TonB family domain-containing protein [Enterobacteriaceae bacterium
9_2_54FAA]
Length = 261
Score = 59.9 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 31/272 (11%), Positives = 77/272 (28%), Gaps = 35/272 (12%)
Query: 7 LAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKG 66
++ LH + LL L + N P + + + + + P+ +
Sbjct: 15 FVFTLTLHGLILLALVWR-NADAYQPYQPPPAV---MLQWSEAIEAPASPLPLPIGIAQQ 70
Query: 67 SSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQ 126
++ K E ++ S+ ++ + ++ S +
Sbjct: 71 QQSAAAEEKQQAEDKAQPKLALAKDAKIEVAKQKKSTEGEKKKPRPVRKIKDQTSDASQA 130
Query: 127 KISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRV 186
++ + + A +SR ++V+ +
Sbjct: 131 AVASNAAPQANTLSSRIA-----------------APFNSDASRHNSEKVTWESLVKGHL 173
Query: 187 IANWNIPSDF-KRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIK 245
P+D +R + + + F +N G V G G L A + +
Sbjct: 174 NRYKKYPTDARRRARTGQAIVTFTVNASGRVQGNQLHTSSGT-----ISLDREALAVLER 228
Query: 246 SQAFRLSPS------TYKSWRNITLFFVPSKM 271
+Q P+ Y + + F +++
Sbjct: 229 AQPLPKPPAEILSDGRYSV--TMPINFDLNEL 258
>gi|148359108|ref|YP_001250315.1| TolA colicin import membrane protein [Legionella pneumophila str.
Corby]
gi|148280881|gb|ABQ54969.1| TolA colicin import membrane protein [Legionella pneumophila str.
Corby]
Length = 332
Score = 59.9 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 32/231 (13%), Positives = 76/231 (32%), Gaps = 12/231 (5%)
Query: 42 DNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRS 101
+ ++ + ++ V + K +E + + + Q + A + E +
Sbjct: 109 EIARLKEEANKIAIARKKQVEEEKKRLKELAEQKALEAKRIEELKKQNEKLAKQRELEAK 168
Query: 102 SSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKEL 161
++ + +E + + K + Q + E+K +
Sbjct: 169 KLAELNKKKQEEKEKAEKLKAEQAKAEKLKAEKARAEQEKAEMERKRQAEAAAAQQAAQN 228
Query: 162 LSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKIN 221
+ R A++ N + NW +P + L + +L G VL
Sbjct: 229 AERQA---RIAGEVDKYKALIVNAIGRNWILPENV--DSSLSSQFRIRLAPDGTVLEVSL 283
Query: 222 VDVVGGTELVRRMLRENARKAVIKSQAFRLSPS--TYKSWRNITLFFVPSK 270
+ G +L +A+ A+ K+ + T+ +R+I+L P +
Sbjct: 284 IRSSGD-----PLLDRSAQTAIYKASPLPVPKDVETFNLFRDISLTVRPEQ 329
>gi|71909663|ref|YP_287250.1| TonB, C-terminal [Dechloromonas aromatica RCB]
gi|71849284|gb|AAZ48780.1| Cell division and transport-associated protein TolA [Dechloromonas
aromatica RCB]
Length = 278
Score = 59.9 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 34/271 (12%), Positives = 69/271 (25%), Gaps = 13/271 (4%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISR------REMLSVDNIYNEDYHSSKYKKIEE 59
LA ++++HV L L+F + P + + K E
Sbjct: 14 ALAFTILVHVALLAFLFFGVQWKRSAPEVMEVELWSPRPMPAQVVPPPPPPPEPEVKPEP 73
Query: 60 PVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMP 119
+ E + ++ K + E K+ K E E
Sbjct: 74 KPIPKVEPKAEPKPEPVLKKPEIVVKEEKKKPEPPKPEPKKPEPPKPEPKKPEPPKAEPK 133
Query: 120 VSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAI 179
K ++ + + + + +++S + D
Sbjct: 134 KPEPPKPEVKAQPKFDFSKELSRETSELKPRPNAQQMANAAAAEAEQRASSNKRGLADYA 193
Query: 180 AIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENA 239
+R +V N +P + G VL G + L
Sbjct: 194 TKIRVKVRGNIMLPPAIQG--NPEAVFDVSQLPTGEVLDVKLKRSSGNS-----ALDSAI 246
Query: 240 RKAVIKSQAFRLSPSTYKSWRNITLFFVPSK 270
+A+ KS R + + + P +
Sbjct: 247 ERAIRKSSPLPKPDDPSLFKRELEIKYRPYE 277
>gi|57237186|ref|YP_178198.1| TonB-dependent colicin receptor protein, putative [Campylobacter
jejuni RM1221]
gi|57165990|gb|AAW34769.1| TonB-dependent colicin receptor protein, putative [Campylobacter
jejuni RM1221]
gi|315057618|gb|ADT71947.1| Ferric siderophore transport system, periplasmic binding protein
TonB [Campylobacter jejuni subsp. jejuni S3]
Length = 248
Score = 59.9 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 28/250 (11%), Positives = 69/250 (27%), Gaps = 36/250 (14%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
G +S+ILH + L+ F+F ++ + VD ++ S +
Sbjct: 8 GFVLSLILHTLVLMFFLFSF-------YTQEKSSGVDFKQGAEFTSIMMVSELPIGELKE 60
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
S + + D + K +
Sbjct: 61 VSIDQKKSNSQDKNKKQDERISLNSQDKNAVLKVQKKIEKQD------------------ 102
Query: 126 QKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNR 185
++++ S K +++ E ++ S + + A++
Sbjct: 103 -----ENQAQKEIANASENSKFKNESLSAPLQSNEDKTQTIVSGNAKEQVKSYQALLMAH 157
Query: 186 VIANWNIPSDF-KRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVI 244
+ P + + ++ V++ +++ G VL K L + A
Sbjct: 158 LTKFKKYPQEAIMQKQEGVVRIRVSIDESGNVLSKELKKSCP-----YAALNDEALSLFK 212
Query: 245 KSQAFRLSPS 254
++ P
Sbjct: 213 RASPLPKPPK 222
>gi|49476142|ref|YP_034183.1| tolA protein [Bartonella henselae str. Houston-1]
gi|49238950|emb|CAF28248.1| tolA protein [Bartonella henselae str. Houston-1]
Length = 385
Score = 59.9 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 33/265 (12%), Positives = 68/265 (25%), Gaps = 20/265 (7%)
Query: 24 NFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVR--------- 74
+ V + + V E EE + V+
Sbjct: 115 SLPVIREQELRETKAEKVSEKPLEVAEKIAPASPEEVHPEVAEKVASETVQQTHKNQGGI 174
Query: 75 -DFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATN 133
+ + T + K + V K
Sbjct: 175 LPQDLASTEKKVPGDQATRYQQLPKIALPEKFPFPQFKPKPVKESAVQNAQAVKKQNQRM 234
Query: 134 KEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRV------- 186
KE+ ++ + E+ ++ S +S R D + + V
Sbjct: 235 KEKTIEDVLAMEENNLLNHARSQGGGAKRSSELESLGARKNINDTTKMAQTLVSIAGGCI 294
Query: 187 -IANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIK 245
+ + V++ F LN++G ++G +D + G + + ++ AV
Sbjct: 295 QKKLKLVALGGDLKNRPVVRLRFYLNREGMIMGDPIIDPLSGEQSQQAIMIRQVYAAVFS 354
Query: 246 SQAF-RLSPSTYKSW-RNITLFFVP 268
Q + L Y W + P
Sbjct: 355 CQPYTDLPRDQYDLWGQGFDFNVDP 379
Score = 51.8 bits (122), Expect = 9e-05, Method: Composition-based stats.
Identities = 26/179 (14%), Positives = 58/179 (32%), Gaps = 5/179 (2%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
++ GLA+S+++HV+FL F + +P + E + + + +S+ + PV
Sbjct: 1 MKRGLALSLVVHVIFLSWGSIYFTNPVSLP-QQLEAVPIILAPVTEEFASQQGALNAPVR 59
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLR----M 118
++ + + E RS + + +E A + +
Sbjct: 60 AIPAVKPTTKPQEKEDARHFGEGQIDSLAPFKPKEKPRSVETTPSSSGEEKASEKSLPVI 119
Query: 119 PVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQD 177
+ K K + K ++ V + ++ I QD
Sbjct: 120 REQELRETKAEKVSEKPLEVAEKIAPASPEEVHPEVAEKVASETVQQTHKNQGGILPQD 178
>gi|322418109|ref|YP_004197332.1| TonB family protein [Geobacter sp. M18]
gi|320124496|gb|ADW12056.1| TonB family protein [Geobacter sp. M18]
Length = 251
Score = 59.9 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 24/263 (9%), Positives = 66/263 (25%), Gaps = 30/263 (11%)
Query: 7 LAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKG 66
LA+S + H + + L+ N++ + VD +
Sbjct: 16 LALSFVCH-LVVFLVIANWHFFPESHQDETPVTYVDMVTLPVASPQSGTPAPAQSQSKAP 74
Query: 67 SSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQ 126
++ + + K + E + L ++ D++
Sbjct: 75 ATAPAPAPPPPAAPAMALPTKPAVKTPAPPQAKTEQQTATEAKAYDERLAKLQQQAEDRR 134
Query: 127 KISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRV 186
+ K + D + +++R+
Sbjct: 135 QADALERL---------------------KRKGAGTQTGMPGGKGTQAGSDYSSYLQSRL 173
Query: 187 IANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKS 246
+ K +V ++ G + G + + ++AV +
Sbjct: 174 KDALR-EVMVTQTKAPQVIATITVSPDGRIE-CRVEKGSGD-----PLFDDAVQRAVALA 226
Query: 247 QAFRLSPSTYKSWRNITLFFVPS 269
+ P ++++ F+P
Sbjct: 227 GKTLVPPPNRSQFKHV-FRFMPE 248
>gi|226227349|ref|YP_002761455.1| hypothetical protein GAU_1943 [Gemmatimonas aurantiaca T-27]
gi|226090540|dbj|BAH38985.1| hypothetical protein [Gemmatimonas aurantiaca T-27]
Length = 249
Score = 59.9 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 34/269 (12%), Positives = 80/269 (29%), Gaps = 43/269 (15%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
L G+ S+++H L+ + R + V+ + + +E P
Sbjct: 14 LTRGMLASVVVHGAMAALVAW---WSTRPAPQRPPVYRVELVG---QAGPRQAGVETPTA 67
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
+ + + +E + K + S + + K +A +
Sbjct: 68 APAAKAPDVAGAERVKEEKVVPTPSKAKKVLPSPKATPSPTRSKQAGSKTAAPTATKSTS 127
Query: 123 YDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIV 182
+ K D+ + ++ P ++ +
Sbjct: 128 APRAGAGATGTKGADVANV-------------------------RTDGIAFPFPGYLSNI 162
Query: 183 RNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKA 242
++ NW+ + L ++ F + + G V G V G + + + A +A
Sbjct: 163 VRQITLNWSPR---RVSAALITEVKFMIRRDGSVAGIEVVRASG--DRLYDLDGMGAVEA 217
Query: 243 VIKSQAFRLSPSTYKSWRN----ITLFFV 267
V +++F PS W + + F
Sbjct: 218 VGSTRSFGPLPSG---WSDDVLVVYFTFD 243
>gi|77920566|ref|YP_358381.1| putative TonB transport protein [Pelobacter carbinolicus DSM 2380]
gi|77546649|gb|ABA90211.1| Cell division and transport-associated protein TolA [Pelobacter
carbinolicus DSM 2380]
Length = 289
Score = 59.9 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 32/273 (11%), Positives = 70/273 (25%), Gaps = 25/273 (9%)
Query: 14 HVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLV 73
H + +L F+ I R + VD + + P + K +S+
Sbjct: 25 HAVVFVL--FSGVFFASRRIEPRPVYYVDLSKMPVLNPQAGRPDGGPAPKVKKTSRPKAT 82
Query: 74 RDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATN 133
+ + T +K + + + S
Sbjct: 83 KPKPAAAAPKAKAKPAPPKKTAVASKPAPTKPVASKTSTPSAKARTSPAPKATAPSHNYQ 142
Query: 134 KEQDLQGISFAEKKSIDTVVVRPDKKELLSKVE---------------KSSRKRIPSQDA 178
+ +++ + +K LS D
Sbjct: 143 SVRQKLAAMREKQQREQELAALKNKIAALSGDNAGTSGGTGSGAPLGMPDGSGDEIGVDL 202
Query: 179 IAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLREN 238
++ + NW + + L +H N +G + V G ++
Sbjct: 203 QTWMQAYLKQNWTLSKYQVTRRDLTATVHLAFNAEGSLTSYRIVKPSGDA-----TFDDS 257
Query: 239 ARKAVIKSQAFRLSPSTYKSWRNITLFFVPSKM 271
+KAV+K++A P + + F +
Sbjct: 258 VKKAVLKARALPRKPGRTLQ---LDVVFNLKDL 287
>gi|92117313|ref|YP_577042.1| hypothetical protein Nham_1768 [Nitrobacter hamburgensis X14]
gi|91800207|gb|ABE62582.1| conserved hypothetical protein [Nitrobacter hamburgensis X14]
Length = 142
Score = 59.9 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 13/88 (14%), Positives = 33/88 (37%), Gaps = 2/88 (2%)
Query: 165 VEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINV-- 222
+ + +A + R+ W P+ + + + + F + G +LG+ +
Sbjct: 16 GSGYATAQDGGVANLAAMSARLKRCWQPPALPRGNPGMEITVQFTFRRDGSLLGRPRITY 75
Query: 223 DVVGGTELVRRMLRENARKAVIKSQAFR 250
+ G T+ R + R +A+ +
Sbjct: 76 ETSGATDEERIIYRTAVMQALQRCAPMP 103
>gi|323169537|gb|EFZ55210.1| tonB family C-terminal domain protein [Shigella sonnei 53G]
Length = 258
Score = 59.9 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 27/248 (10%), Positives = 64/248 (25%), Gaps = 28/248 (11%)
Query: 7 LAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKG 66
S++LH + L + F+ ++ +S + + + SS Q
Sbjct: 17 FICSLLLHGLIFLAFIWRFS-EVQPAMSPAPAIMLQWAEIIEAPSSPLSLPVGIAQQESA 75
Query: 67 SSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQ 126
++E + Q+ T + K + ++ +P
Sbjct: 76 VTEEKQQTED-RQQRPVTEDSDATIEITRKKKSSDGEKKKTRPPRKITAQTSDSNPTAVS 134
Query: 127 KISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRV 186
+ + + + S + V+ +
Sbjct: 135 SNAAPQALVESSRIAAPFNSDSTKRDNSE--------------------ASWESRVKGHL 174
Query: 187 IANWNIPSDFK-RFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIK 245
P D + R + + F +N +G ++ G L A + +
Sbjct: 175 NRYKRYPGDARKRARTGTAVVTFTVNTEGTIVSSFLEISSGT-----LSLDREAIAVLER 229
Query: 246 SQAFRLSP 253
+Q P
Sbjct: 230 AQPLPKPP 237
>gi|217975311|ref|YP_002360062.1| TonB family protein [Shewanella baltica OS223]
gi|217500446|gb|ACK48639.1| TonB family protein [Shewanella baltica OS223]
Length = 268
Score = 59.9 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 25/250 (10%), Positives = 74/250 (29%), Gaps = 16/250 (6%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
L ++ LH+ ++ ++ ++ P + + + I +
Sbjct: 16 ALLLAAFLHIALTAAVF--WSPAVITPSGQAKAVGNGGIEISLGPAGSAASTLPQTTAPV 73
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
+ +++ + + T + K + + ++ +S + +P +
Sbjct: 74 AEQKSEPIKEQLDKPARLPPITKKATPTLSTKPKLIAPTPQDELTTQSEVNEQHSNPTET 133
Query: 126 QKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNR 185
+ ++ + + +QD A +
Sbjct: 134 PSPTALAAPANEVGQNGEGHSAEQNKAANGDNMTGGG--------LLGDTQDYTATLLAW 185
Query: 186 VIANWNIPSDFK-RFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVI 244
+ + P + R ++ V ++F L+++G V G + L A K +
Sbjct: 186 LEQHKEYPRTARNRRQQGTVMLYFVLDRQGRVSASRIEQSSG-----YQTLDAEALKMLE 240
Query: 245 KSQAFRLSPS 254
++Q P
Sbjct: 241 RAQPLPAIPD 250
>gi|86153763|ref|ZP_01071966.1| putative tonB transport protein [Campylobacter jejuni subsp. jejuni
HB93-13]
gi|85842724|gb|EAQ59936.1| putative tonB transport protein [Campylobacter jejuni subsp. jejuni
HB93-13]
Length = 248
Score = 59.9 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 34/250 (13%), Positives = 82/250 (32%), Gaps = 36/250 (14%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
G +S+ILH + L+ F+F ++ + VD ++ S
Sbjct: 8 GFVLSLILHTLVLMFFLFSF-------YTQEKSSGVDFKQGAEFTSIM------------ 48
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
+V +F + E + DQ K+++ + + E+ S + K
Sbjct: 49 ------MVSEFPIGELKEVSIDQKKSNSQDKNK-----KQDERISFNSQDKNAVLKVQKK 97
Query: 126 QKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNR 185
+ ++++ S K +++ E ++ S + + A++
Sbjct: 98 IEKQDENQAQKEIANASENSKFKNESLSAPLQSNEDKTQTIVSGNAKEQVKSYQALLMAH 157
Query: 186 VIANWNIPSDF-KRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVI 244
+ P + + ++ V++ +++ G VL K L + A
Sbjct: 158 LTKFKKYPQEAIMQKQEGVVRIRVSIDESGNVLSKELKKSCP-----YAALNDEALSLFK 212
Query: 245 KSQAFRLSPS 254
++ P
Sbjct: 213 RASPLPKPPK 222
>gi|325579236|ref|ZP_08149192.1| outer membrane receptor-mediated transport energizer protein TonB
[Haemophilus parainfluenzae ATCC 33392]
gi|325159471|gb|EGC71605.1| outer membrane receptor-mediated transport energizer protein TonB
[Haemophilus parainfluenzae ATCC 33392]
Length = 266
Score = 59.9 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 32/259 (12%), Positives = 75/259 (28%), Gaps = 19/259 (7%)
Query: 14 HVMFLLLLYFNFNVQLLVPISRR----EMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQ 69
H L L++N++ +S++ I + EP +
Sbjct: 20 HGSILGALFWNWHTPHEAASDAPGEISTTISMEMIQGMRVEEPTPEPEPEPQQAEPEQEK 79
Query: 70 ENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKIS 129
+ V D + Q ++ + K E + + + ++ + K
Sbjct: 80 QETVADPTKQPEPEKKKEPEKKPEKPIEKPKPKPKEKPKEKPKNEVKTEKPVEMPKN--- 136
Query: 130 KATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIAN 189
+ + + ++ + S A +R + +
Sbjct: 137 ------LPIGDKNINSTATANSKATTTGQPGTNGVQGGSGTNTDELNAYRAAIRREIERH 190
Query: 190 WNIPSDFK-RFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQA 248
P+ K K+ V + F + G + G+ G L A +AV ++
Sbjct: 191 KRYPARAKMMRKQGVVSVSFSVGADGSLSGERVTTSSGD-----ESLDNAALEAVRSARP 245
Query: 249 FRLSPSTYKSWRNITLFFV 267
P+ + S ++ + F
Sbjct: 246 VGPKPAGFASSVSVPISFT 264
>gi|317402628|gb|EFV83187.1| hypothetical protein HMPREF0005_02214 [Achromobacter xylosoxidans
C54]
Length = 299
Score = 59.9 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 26/247 (10%), Positives = 67/247 (27%), Gaps = 13/247 (5%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
L G+AIS+++H L F P + E++ + + +
Sbjct: 26 LRIGIAISLLVHAGALAW-RFGAPALSRPPATSLEIV---LLNARSETPPDTPRAQAQNQ 81
Query: 63 QFKGSSQENLVRDFSVQENGDRFSD--QTKTHATENETKRSSSSKGEQALKESALLRMPV 120
G + E + + + G + + + + Q
Sbjct: 82 MSGGGNAERGLATTPLPQTGASAETIVLEAMRKRQVQLEAEQTRLMTQLRAADKAGAERQ 141
Query: 121 SPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIA 180
+ ++ +D + + + V+ E + S + +
Sbjct: 142 AVNPWPDGNERGKDAEDQASVIQNAQVAALAAKVQQYNAEPRKQFVAPSAQASRYAAYLD 201
Query: 181 IVRNRVIANWNIPSDFKRFKKL--RVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLREN 238
R R+ A + ++ +++ + G + +L +
Sbjct: 202 AWRARIEAVGTRHYPDEARGRIYGSLRITVSVRADGSIANVEIDQPSPHA-----VLNQA 256
Query: 239 ARKAVIK 245
AR+ V
Sbjct: 257 ARRIVQL 263
>gi|154248195|ref|YP_001419153.1| TonB family protein [Xanthobacter autotrophicus Py2]
gi|154162280|gb|ABS69496.1| TonB family protein [Xanthobacter autotrophicus Py2]
Length = 277
Score = 59.5 bits (142), Expect = 4e-07, Method: Composition-based stats.
Identities = 24/269 (8%), Positives = 66/269 (24%), Gaps = 15/269 (5%)
Query: 1 MRLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYN--EDYHSSKYKKIE 58
+RL G + + +H + + F + + + ++ + +
Sbjct: 20 LRLAAGALVIVTVHAVAVYAALF-WRKVEAGESAPPAAIMIELAPLAVSEQQQVEDAAPG 78
Query: 59 EPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRM 118
+VQ S + + ++ E E + + + +
Sbjct: 79 PQMVQAPESVPDAPDIPAEAAPPPEPVVNEVVEKLPEVEPSKEQAEVVLPKPEPKKEVVK 138
Query: 119 PVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDA 178
+K K + + S + + ++ + D
Sbjct: 139 QPPKEKVEKPKKD---AKPTRRASAPATTAAPRSDAPAAQATAAPSPGAAAVRSAALADW 195
Query: 179 IAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLREN 238
+ + R + L+ G V ++ G +L
Sbjct: 196 RSRASAHLNRYKRPQGSLLG----RPSVSISLSASGSVTSVRLLNKSGN-----EVLDRE 246
Query: 239 ARKAVIKSQAFRLSPSTYKSWRNITLFFV 267
A ++ F P ++ + F
Sbjct: 247 AVAMAQRASPFPAPPDGKPLTFSVPINFT 275
>gi|87121176|ref|ZP_01077067.1| hypothetical protein MED121_11279 [Marinomonas sp. MED121]
gi|86163668|gb|EAQ64942.1| hypothetical protein MED121_11279 [Marinomonas sp. MED121]
Length = 265
Score = 59.5 bits (142), Expect = 4e-07, Method: Composition-based stats.
Identities = 28/242 (11%), Positives = 71/242 (29%), Gaps = 18/242 (7%)
Query: 25 FNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQE---- 80
+P + + L + + ++ S+ Q ++ + + ++
Sbjct: 3 VGFDFELPSPKAKTLEITLVQHKTK-KSEEADFIAQANQLGSGTEIRKQKLTTTEDARFI 61
Query: 81 -----NGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKE 135
+ R+ S+K + A + + ++ T
Sbjct: 62 ADDIYEITPPVQPQLASSQPKVDNRTISTKNKDAAFQVIEESSNEAKTLAEQFLGETQIP 121
Query: 136 QDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSD 195
L + +D K+ + ++ S K + R R+ NI
Sbjct: 122 SHLTTDIATLEALLDKQRQAYAKRPRIRRLTSVSAKAAVDAQYLDDWRRRIERIGNIHYP 181
Query: 196 FKRFKK---LRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLS 252
K + ++++ + G+V + G +L + A + V ++ F
Sbjct: 182 SKAKRDKLYGQLRLAVMIQPNGYVENIEILQSSG-----ILILDDAAMRIVRLAEPFTSF 236
Query: 253 PS 254
PS
Sbjct: 237 PS 238
>gi|118602710|ref|YP_903925.1| hypothetical protein Rmag_0723 [Candidatus Ruthia magnifica str. Cm
(Calyptogena magnifica)]
gi|118567649|gb|ABL02454.1| Cell division and transport-associated protein TolA [Candidatus
Ruthia magnifica str. Cm (Calyptogena magnifica)]
Length = 293
Score = 59.5 bits (142), Expect = 4e-07, Method: Composition-based stats.
Identities = 25/259 (9%), Positives = 76/259 (29%), Gaps = 15/259 (5%)
Query: 9 ISMILHVMFLLLLYFN------FNVQLLVPISRREMLSVDNIYNED------YHSSKYKK 56
I+++ H+ ++ L F+ Q+ + ++++ + K +K
Sbjct: 24 ITIVFHIGLVIGLLFSNVQRWEIPKQIAKSNVTFKAVTINLTEIKKEKQRLIKIKQKREK 83
Query: 57 IEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALL 116
+ + + + + ++ + Q + T E KR + + + L
Sbjct: 84 RFKALQRAEKKVENERYKEQQRLKKLKVKVKQERKAKTIAERKRKEAESKSKQALKKKKL 143
Query: 117 RMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQ 176
+ ++K Q E+ + +++ ++ + +
Sbjct: 144 AEKEALEAEKKKQAIEKLRQVEAKKFKKEQDNRSLKKEIQAEEDQDRQLAQENILNELKF 203
Query: 177 DAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLR 236
+ I + R+ W + + G V + +
Sbjct: 204 NYINQIALRIKEKWRYQGA---KDSWSCDVEILQDLNGQVKSVNLRFCNVDDSAKAQSFK 260
Query: 237 ENARKAVIKSQAFRLSPST 255
++ +AV K+ +P
Sbjct: 261 DSIERAVYKASPLPYAPDK 279
>gi|148827394|ref|YP_001292147.1| TonB [Haemophilus influenzae PittGG]
gi|148718636|gb|ABQ99763.1| TonB [Haemophilus influenzae PittGG]
Length = 264
Score = 59.5 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 33/257 (12%), Positives = 78/257 (30%), Gaps = 11/257 (4%)
Query: 12 ILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQEN 71
I H + + + +N+N S + +S +I E ++ + +
Sbjct: 16 IAHGIVIGFILWNWNEPSDSANSAQGDIS-TSISMELLQGMVLEEPAPEPEDVQKEPENV 74
Query: 72 LVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKA 131
++ E ++ E+ ++ K+ I+K
Sbjct: 75 QKEPEPEKQEIVEDPTIKPEPKKIKEPEKEKPKPKEKPKEKPKNKPKKEVKPQKKPINKE 134
Query: 132 TNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWN 191
K + S T ++ +S + +R + ++
Sbjct: 135 LPKGDENIDSSANVNDKASTTSAANSNAQVAGSGTDTSEIAA----YRSAIRREIESHKR 190
Query: 192 IPSDFKR-FKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFR 250
P+ K K+ +V + F + G + G G L + A A+ S++
Sbjct: 191 YPTRAKIMRKQGKVSVSFNVGADGSLSGAKVTKSSGD-----ESLDKAALDAINVSRSVG 245
Query: 251 LSPSTYKSWRNITLFFV 267
P+ + S ++ + F
Sbjct: 246 TRPAGFPSSLSVQISFT 262
>gi|260580866|ref|ZP_05848691.1| TolA protein [Haemophilus influenzae RdAW]
gi|260092489|gb|EEW76427.1| TolA protein [Haemophilus influenzae RdAW]
Length = 270
Score = 59.5 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 33/261 (12%), Positives = 82/261 (31%), Gaps = 13/261 (4%)
Query: 12 ILHVMFLLLLYFNFNVQLLVPI----SRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGS 67
I H + + + +N+N +S++ + + +
Sbjct: 16 IAHGIVIGFILWNWNEPSDSANSAQGDISTSISMELLQGMVLEEPAPEPEDVQKEPEPEP 75
Query: 68 SQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQK 127
EN+ ++ ++ K + + K ++ KE + ++K
Sbjct: 76 EPENVQKEPEPEKQEIVEDPTIKPEPKKIKEPEKEKPKPKEKPKEKPKNKPKKEVKPQKK 135
Query: 128 ISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVI 187
NKE + +++ ++V S + +R +
Sbjct: 136 ---PINKELPKGDENIDSSANVNDKASTTSAANSNAQVAGSGTDTSEIAAYRSAIRREIE 192
Query: 188 ANWNIPSDFKR-FKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKS 246
++ P+ K K+ +V + F + G + G G L + A A+ S
Sbjct: 193 SHKRYPTRAKIMRKQGKVSVSFNVGADGSLSGAKVTKSSGD-----ESLDKAALDAINVS 247
Query: 247 QAFRLSPSTYKSWRNITLFFV 267
++ P+ + S ++ + F
Sbjct: 248 RSVGTRPAGFPSSLSVQISFT 268
>gi|319786284|ref|YP_004145759.1| protein TolA [Pseudoxanthomonas suwonensis 11-1]
gi|317464796|gb|ADV26528.1| protein TolA [Pseudoxanthomonas suwonensis 11-1]
Length = 327
Score = 59.5 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 28/255 (10%), Positives = 75/255 (29%), Gaps = 16/255 (6%)
Query: 26 NVQLLVPISRREMLSVDNIYN---------EDYHSSKYKKIEEPVVQFKGSSQENLVRDF 76
+P E + + +D + +K ++ + Q Q+ RD
Sbjct: 78 PKPEPLPEPVAETAPEETVPPPQPLPEPRPQDAAVAPQQKAQDFIPQPDTVDQDEARRDA 137
Query: 77 SVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQ 136
+E ++ ++ + + T++ + E + +A ++ + +
Sbjct: 138 IAREKAEKEQEERRRQQQVDLTEQQRQKEAENQRRLAAQAEEAERQKKLAELRRQREQAA 197
Query: 137 DLQGISFAEKKSIDTVVVRPD-KKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSD 195
++ + + + RP + + A ++ V+ W P
Sbjct: 198 RQAELAEQKLRQLQQAQQRPATPAPSQGSPGQGGTSEDLTAKYAAAIQQAVVNQWLRPET 257
Query: 196 FKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPST 255
+ R ++ + G V+ + + AV+++Q
Sbjct: 258 VPLGQ--RCRVQIRQLPGGEVIEVKV----QPGCPYDEAGQRSLEAAVLRAQPLPYRGFE 311
Query: 256 YKSWRNITLFFVPSK 270
R +TL F
Sbjct: 312 SVFQRTLTLNFEARD 326
>gi|193222402|emb|CAL62871.2| Conserved hypothetical protein; putative TonB protein
[Herminiimonas arsenicoxydans]
Length = 304
Score = 59.5 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 33/267 (12%), Positives = 73/267 (27%), Gaps = 27/267 (10%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
L +A+S++ H L + + P L V + + +
Sbjct: 18 LTIAVAVSVLAHAALLAVHFTAPEAFKFQPTD--PGLEVILVNAKHDKAPLKADALAQAN 75
Query: 63 Q----------FKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKE 112
K + + R + + + + +A +
Sbjct: 76 LDGGGNADAGRAKSPLPDFRKSEDGDSAKAARRKVEELERHQQKLLSQLARKTPFRAPQV 135
Query: 113 SALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKR 172
+ + + P + + + L +S++ RP K ++ +
Sbjct: 136 TDVEPVKDLPPQRNAT-DMLDSAKALLRREAEIARSVEDYNKRPKKTQVTPSTREVGYAA 194
Query: 173 IPSQDAIAIVRNRVIANWNIPSDFKRFKKLR--VKMHFQLNQKGFV---LGKINVDVVGG 227
++R+ + K KKL + + + Q G + G V+ G
Sbjct: 195 -----YYKAFQDRIEKYGTLNFPQKDGKKLYGDLILFIPIFQDGTIYMKDGGPRVERSSG 249
Query: 228 TELVRRMLRENARKAVIKSQAFRLSPS 254
L + A V +S F P
Sbjct: 250 N----PALDQAALNIVRRSVPFGKFPE 272
>gi|148926347|ref|ZP_01810031.1| possible tonB transport protein [Campylobacter jejuni subsp. jejuni
CG8486]
gi|145844739|gb|EDK21844.1| possible tonB transport protein [Campylobacter jejuni subsp. jejuni
CG8486]
Length = 248
Score = 59.5 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 34/250 (13%), Positives = 82/250 (32%), Gaps = 36/250 (14%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
G +S+ILH + L+ F+F ++ + VD ++ S
Sbjct: 8 GFVLSLILHTLVLMFFLFSF-------YTQEKSSGVDFKQGAEFTSIM------------ 48
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
+V +F + E + DQ K+++ + + E+ S + K
Sbjct: 49 ------MVSEFPIGELKEVSIDQKKSNSQDKNK-----KQDERISFNSQDKNAVLKVQKK 97
Query: 126 QKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNR 185
+ ++++ S K +++ E ++ S + + A++
Sbjct: 98 IEKQDKNQAQKEIADASENSKFKNESLSAPLQSNEDKTQTIVSGNAKEQVKSYQALLMAH 157
Query: 186 VIANWNIPSDF-KRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVI 244
+ P + + ++ V++ +++ G VL K L + A
Sbjct: 158 LTKFKKYPQEAIMQKQEGVVRIRVSIDESGNVLSKELKKSCP-----YAALNDEALSLFK 212
Query: 245 KSQAFRLSPS 254
++ P
Sbjct: 213 RASPLPKPPK 222
>gi|77163682|ref|YP_342207.1| TonB-like [Nitrosococcus oceani ATCC 19707]
gi|254436105|ref|ZP_05049612.1| protein TolA [Nitrosococcus oceani AFC27]
gi|76881996|gb|ABA56677.1| Cell division and transport-associated protein TolA [Nitrosococcus
oceani ATCC 19707]
gi|207089216|gb|EDZ66488.1| protein TolA [Nitrosococcus oceani AFC27]
Length = 318
Score = 59.5 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 35/295 (11%), Positives = 81/295 (27%), Gaps = 51/295 (17%)
Query: 4 ENGLAISMILHVMFLLLLYFNFNV-QLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
A+++++H + +L + P++ V +
Sbjct: 8 WFAFALALLVHGILFAVLVISLGWTPKPEPVNIAPAQIVQATVVDKEKLLAEAAQRRQAE 67
Query: 63 QFKGSSQENLVRDFS-----------------------VQENGDRFSDQTKTHATENETK 99
Q + Q+ LV+ QE Q + A +
Sbjct: 68 QDALARQQALVQKREAAERQRAEAQRQQQARAEQARRETQEQQALEQKQQEEQARLKRLE 127
Query: 100 RSSSSKGEQALKESALLRMPVSPYDKQKISKATNKE--------------------QDLQ 139
+K E A +++ + +Q ++ E + +
Sbjct: 128 AERQAKEEAARRQAEAEKKRAEEKKRQAEAEKRRLEEERRRAEAAKRKAEEERKKIEAAK 187
Query: 140 GISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRF 199
+ E+K + + + ++ + E +++ + V+ RV W P +
Sbjct: 188 RKAEEERKKAEAARRQQELQDRIEAEENAAQVEAARNRFLTQVKMRVQRYWIRPPSARD- 246
Query: 200 KKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPS 254
L V + ++ G V G R + AV K+ +
Sbjct: 247 -DLVVLLQVEMLPSGEVRNVKVAKSSGD-----RAFDRSGEAAVYKAAPLPIPAE 295
>gi|54294384|ref|YP_126799.1| hypothetical protein lpl1453 [Legionella pneumophila str. Lens]
gi|53754216|emb|CAH15693.1| hypothetical protein lpl1453 [Legionella pneumophila str. Lens]
gi|307610270|emb|CBW99834.1| hypothetical protein LPW_15951 [Legionella pneumophila 130b]
Length = 332
Score = 59.5 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 32/231 (13%), Positives = 75/231 (32%), Gaps = 12/231 (5%)
Query: 42 DNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRS 101
+ ++ + ++ V + K +E + + + Q + A + E +
Sbjct: 109 EIARLKEEANKIAIARKKQVEEEKKRLKELAEQKALEAKRIEELKKQNEKLAKQRELEAK 168
Query: 102 SSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKEL 161
++ + +E + + K + Q + E+K +
Sbjct: 169 KLAELNKKKQEEKEKAEKLKAEQAKAEKLKAEKARAEQEKAEMERKRQAEAAAAQQAAQN 228
Query: 162 LSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKIN 221
+ R A++ N + NW +P + L + +L G VL
Sbjct: 229 AERQA---RIAGEVDKYKALIVNAIGRNWILPENV--DSSLSSQFRIRLAPDGTVLEVSL 283
Query: 222 VDVVGGTELVRRMLRENARKAVIKSQAFRLSPS--TYKSWRNITLFFVPSK 270
G +L +A+ A+ K+ + T+ +R+I+L P +
Sbjct: 284 TRSSGD-----PLLDRSAQTAIYKASPLPVPKDVETFNLFRDISLTVRPEQ 329
>gi|330502224|ref|YP_004379093.1| TonB family protein [Pseudomonas mendocina NK-01]
gi|328916510|gb|AEB57341.1| TonB family protein [Pseudomonas mendocina NK-01]
Length = 327
Score = 59.5 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 30/320 (9%), Positives = 85/320 (26%), Gaps = 64/320 (20%)
Query: 7 LAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKG 66
+ ++ LHV+ +L+ +F +P +R ++ + + + ++ + +
Sbjct: 16 IVWAVGLHVLMFAMLFVSFAFTPELPPARP-VVQATLYQLQSQSQATTQTTQKIAGEAQK 74
Query: 67 SSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQ 126
+S + Q+ + K++ K + +++ + + +
Sbjct: 75 TSAPQFETERLEQKKAEEQKQAQAEAQKVAAAKKAEEQKQAEEARKAEAAKKAEAEKAAE 134
Query: 127 KISK---------------------------------------------------ATNKE 135
+ + ++
Sbjct: 135 QKRQADIAKKRAEEEAKKKAAEDAKKKAAEDAKKKAAEEAKKKAAAEAAKKKAAEDAKRK 194
Query: 136 QDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSD 195
+ AE + + + + + + ++ + NW P
Sbjct: 195 AEEARRKAAEDQKAAALADLLSDNVQNQQALAETHGDQVAGNLDDLIIKLITENWQRPMS 254
Query: 196 FKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFR----L 251
+R + V++ Q+ G V G +A AV L
Sbjct: 255 ARR--GMSVELLIQMLPDGTVTNASVSRSSGDA-----PFDNSAVAAVRNVGRIPEMQQL 307
Query: 252 SPSTYK-SWRNITLFFVPSK 270
+T+ +R + F P
Sbjct: 308 DRATFDSRYRQRRVIFKPED 327
>gi|120554620|ref|YP_958971.1| TonB family protein [Marinobacter aquaeolei VT8]
gi|120324469|gb|ABM18784.1| Cell division and transport-associated protein TolA [Marinobacter
aquaeolei VT8]
Length = 342
Score = 59.5 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 39/334 (11%), Positives = 98/334 (29%), Gaps = 73/334 (21%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDY-HSSKYKKIEEPV 61
L++ +A+S+ LH++ + ++ P +S I E ++ E
Sbjct: 16 LKSPVAVSVGLHLLVFGIALAGWSWNT-PPEPEPRSISARLISPEPRPTPVVEEQDEADK 74
Query: 62 VQFKGSSQENLVRDFSVQENGDRFSDQTKTHATEN----------------ETKRSSSSK 105
Q + +Q + Q + + Q + + ++
Sbjct: 75 EQERKQAQAREQEEAERQRQAEEKARQEAERKAQEEARRREEERRQQEAQAKELAEKQAR 134
Query: 106 GEQALKESALLRMPVSPYDKQKIS------------------------------------ 129
+A ++ A K +
Sbjct: 135 EREAARQKAEAEAKERERQKAEQERKRQEEAKRRAEEEKRRQEEQRKKEEAERQRREEEA 194
Query: 130 ---------KATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIA 180
+A + ++ Q + A++ + +++ + + ++ + S A
Sbjct: 195 RKEAERKRLEAERRLREQQLEALADQARQEREAEARRQQKAAAARAREAQMQSESDKYQA 254
Query: 181 IVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENAR 240
++R R+ W PS + + ++ L G + V G T +A
Sbjct: 255 LIRERLKQAWYPPSSA--NENMTARLQITLLPTGELASVKLVGSSGNT-----AFDNSAL 307
Query: 241 KAVIKSQAFRLS--PSTYKS-WRNITLFFVPSKM 271
AV + + T++ +R + F P ++
Sbjct: 308 SAVRSLNRYPIPDNRDTFERYFRQFMIEFNPQRL 341
>gi|46581504|ref|YP_012312.1| tonB protein [Desulfovibrio vulgaris str. Hildenborough]
gi|120601330|ref|YP_965730.1| TonB domain-containing protein [Desulfovibrio vulgaris DP4]
gi|46450926|gb|AAS97572.1| tonB protein, putative [Desulfovibrio vulgaris str. Hildenborough]
gi|120561559|gb|ABM27303.1| Cell division and transport-associated protein TolA [Desulfovibrio
vulgaris DP4]
gi|311235153|gb|ADP88007.1| protein TolA [Desulfovibrio vulgaris RCH1]
Length = 341
Score = 59.5 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 34/222 (15%), Positives = 71/222 (31%), Gaps = 13/222 (5%)
Query: 55 KKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESA 114
+ + S ++ E D K A +++ K + ++G+ A +
Sbjct: 124 AQPKPEPDAKAISEKKKDEPKKPEPETSKDAKDTKKAVAGKDDAKDKAKTEGKPAPSKDD 183
Query: 115 LLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIP 174
+L+ ++ + S T ++ G A + +
Sbjct: 184 ILKQALADAQGKAGSTGTAQKSSGTGGKTAGGSVNNALAEMQKMAAAGGGGGGGGEGHGS 243
Query: 175 SQD-----AIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTE 229
I V V NW P R + L+V++ ++ G + G +
Sbjct: 244 GGGGVGDVYIGQVMAIVRQNWEFPQLASR-QDLQVRVRVTVDASGRIADAKLEGSSGRPD 302
Query: 230 LVRRMLRENARKAVIKSQAFRLSPSTYKSWRNITLFFVPSKM 271
+A KA+ K+Q P + +R++ L F + M
Sbjct: 303 -----FDASALKALHKTQMLPPPPK--EEFRDLLLVFNLNDM 337
>gi|305432725|ref|ZP_07401885.1| TonB system transport protein [Campylobacter coli JV20]
gi|304444234|gb|EFM36887.1| TonB system transport protein [Campylobacter coli JV20]
Length = 248
Score = 59.1 bits (141), Expect = 5e-07, Method: Composition-based stats.
Identities = 27/250 (10%), Positives = 69/250 (27%), Gaps = 36/250 (14%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
G +S+ILH + L+ F+F ++ + VD ++ S +
Sbjct: 8 GFVLSLILHALVLMFFLFSF-------YTQEKSSGVDFKQGLEFTSIMMVSELPIGELKE 60
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
S + + D + + K +
Sbjct: 61 VSIDQKKSNSQDKNKKQDERINLNSQDKNAVLKVQKKIKKQD------------------ 102
Query: 126 QKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNR 185
++++ S K +++ E ++ S + + A++
Sbjct: 103 -----KNQAQKEIANASENSKFKNESLSAPLQSNEDKTQTIVSGNAKEQVKSYQALLMAH 157
Query: 186 VIANWNIPSDF-KRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVI 244
+ P + + ++ V++ +++ G VL K L +
Sbjct: 158 LTKFKKYPQEAIMQKQEGVVRIRVSIDESGNVLSKELKKSCP-----YAALNDEVLSLFK 212
Query: 245 KSQAFRLSPS 254
++ P
Sbjct: 213 RASPLPKPPK 222
>gi|296107156|ref|YP_003618856.1| hypothetical protein lpa_02285 [Legionella pneumophila 2300/99
Alcoy]
gi|295649057|gb|ADG24904.1| hypothetical protein lpa_02285 [Legionella pneumophila 2300/99
Alcoy]
Length = 332
Score = 59.1 bits (141), Expect = 6e-07, Method: Composition-based stats.
Identities = 32/231 (13%), Positives = 76/231 (32%), Gaps = 12/231 (5%)
Query: 42 DNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRS 101
+ ++ + ++ V + K +E + + + Q + A + E +
Sbjct: 109 EIARLKEEANKIAIARKKQVEEEKKRLKELAEQKALEAKRIEELKKQNEKLAKQRELEAK 168
Query: 102 SSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKEL 161
++ + +E + + K + Q + E+K +
Sbjct: 169 KLAELNKKKQEEKEKAEKLKAEQAKAEKLKAEKARAEQEKAEMERKRQAEAAAAQQAAQN 228
Query: 162 LSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKIN 221
+ R A++ N + NW +P + L + +L G VL
Sbjct: 229 AERQA---RIAGEVDKYKALIVNAIGRNWILPENV--DSSLSSQFRIRLAPDGTVLEVSL 283
Query: 222 VDVVGGTELVRRMLRENARKAVIKSQAFRLSPS--TYKSWRNITLFFVPSK 270
+ G +L +A+ A+ K+ + T+ +R+I+L P +
Sbjct: 284 IRSSGD-----PLLDRSAQTAIYKASPLPVPQDVETFNLFRDISLTVRPEQ 329
>gi|86149722|ref|ZP_01067952.1| TonB-dependent colicin receptor protein, putative [Campylobacter
jejuni subsp. jejuni CF93-6]
gi|88597419|ref|ZP_01100654.1| TonB-dependent colicin receptor protein, putative [Campylobacter
jejuni subsp. jejuni 84-25]
gi|218561860|ref|YP_002343639.1| TonB transport protein [Campylobacter jejuni subsp. jejuni NCTC
11168]
gi|85839990|gb|EAQ57249.1| TonB-dependent colicin receptor protein, putative [Campylobacter
jejuni subsp. jejuni CF93-6]
gi|88190480|gb|EAQ94454.1| TonB-dependent colicin receptor protein, putative [Campylobacter
jejuni subsp. jejuni 84-25]
gi|112359566|emb|CAL34350.1| TonB transport protein [Campylobacter jejuni subsp. jejuni NCTC
11168]
Length = 248
Score = 59.1 bits (141), Expect = 6e-07, Method: Composition-based stats.
Identities = 33/250 (13%), Positives = 82/250 (32%), Gaps = 36/250 (14%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
G +S+ILH + L+ F+F ++ + VD ++ S
Sbjct: 8 GFVLSLILHTLVLMFFLFSF-------YTQEKSSGVDFKQGAEFTSIM------------ 48
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
+V +F + E + DQ K+++ + + E+ S + K
Sbjct: 49 ------MVSEFPIGELKEVSIDQKKSNSQDKNK-----KQDERISFNSQDKNAVLKVQKK 97
Query: 126 QKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNR 185
+ ++++ S K +++ + ++ S + + A++
Sbjct: 98 IEKQDENQAQKEIANASENSKFKNESLSAPLQSNKDKTQTIVSGNAKEQVKSYQALLMAH 157
Query: 186 VIANWNIPSDF-KRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVI 244
+ P + + ++ V++ +++ G VL K L + A
Sbjct: 158 LTKFKKYPQEAIMQKQEGVVRIRVSIDESGNVLSKELKKSCP-----YAALNDEALSLFK 212
Query: 245 KSQAFRLSPS 254
++ P
Sbjct: 213 RASPLPKPPK 222
>gi|291326203|ref|ZP_06123559.2| putative periplasmic colicin Js sensitivity protein CjrB
[Providencia rettgeri DSM 1131]
gi|291315364|gb|EFE55817.1| putative periplasmic colicin Js sensitivity protein CjrB
[Providencia rettgeri DSM 1131]
Length = 267
Score = 59.1 bits (141), Expect = 6e-07, Method: Composition-based stats.
Identities = 30/254 (11%), Positives = 80/254 (31%), Gaps = 24/254 (9%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPV 61
++ A+++ LHV + + Q + + ++ I E + +
Sbjct: 16 KMSGWFALAIALHVAVVGGYIWVTYNQQWEELLPPPSVVME-ISIESQAEQLTEVNIGQL 74
Query: 62 VQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVS 121
+ +SQ ++Q + + + + + +Q ++ + + +
Sbjct: 75 QELAVASQAYEAPSEEKIIPPLAINEQAEVQVAKTVSTKRIAEVKKQKREKQVVEQKQAT 134
Query: 122 PYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAI 181
++ LQ A + + + + K + A
Sbjct: 135 DSKANDAPVTSDAAAPLQTQKIAAEFNSQSQSIENAK-----------------RLWEAQ 177
Query: 182 VRNRVIANWNIPSDFKRFKKL-RVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENAR 240
V ++ P D R ++ + + F ++ +GF+L V G R L A
Sbjct: 178 VLGKLNKYKRFPEDAVRRGRVGQSAVTFTVDPQGFLLDSELVSSSGT-----RSLDREAL 232
Query: 241 KAVIKSQAFRLSPS 254
+ + ++ P+
Sbjct: 233 QVLSRAAPLPEPPT 246
>gi|52841802|ref|YP_095601.1| TolA colicin import membrane protein [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|52628913|gb|AAU27654.1| TolA colicin import membrane protein [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
Length = 332
Score = 59.1 bits (141), Expect = 6e-07, Method: Composition-based stats.
Identities = 32/231 (13%), Positives = 76/231 (32%), Gaps = 12/231 (5%)
Query: 42 DNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRS 101
+ ++ + ++ V + K +E + + + Q + A + E +
Sbjct: 109 EIARLKEEANKIAIARKKQVEEEKKRLKELAEQKALEAKRIEELKKQNEKLAKQRELEAK 168
Query: 102 SSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKEL 161
++ + +E + + K + Q + E+K +
Sbjct: 169 KLAELNKKKQEEKEKAEKLKAEQAKAEKLKAEKARAEQEKAEMERKRQAEAAAAQQAAQN 228
Query: 162 LSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKIN 221
+ R A++ N + NW +P + L + +L G VL
Sbjct: 229 AERQA---RIAGEVDKYKALIVNAIGRNWILPENV--DSSLSSQFRIRLAPDGTVLEVSL 283
Query: 222 VDVVGGTELVRRMLRENARKAVIKSQAFRLSPS--TYKSWRNITLFFVPSK 270
+ G +L +A+ A+ K+ + T+ +R+I+L P +
Sbjct: 284 IRSSGD-----PLLDRSAQTAIYKASPLPVPQDVETFNLFRDISLTVRPEQ 329
>gi|16272209|ref|NP_438420.1| TonB [Haemophilus influenzae Rd KW20]
gi|1174733|sp|P42872|TONB_HAEIN RecName: Full=Protein tonB
gi|1573217|gb|AAC21917.1| tonB protein [Haemophilus influenzae Rd KW20]
Length = 270
Score = 59.1 bits (141), Expect = 6e-07, Method: Composition-based stats.
Identities = 31/261 (11%), Positives = 79/261 (30%), Gaps = 13/261 (4%)
Query: 12 ILHVMFLLLLYFNFNVQLLVPI----SRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGS 67
I H + + + +N+N +S++ + + +
Sbjct: 16 IAHGIVIGFILWNWNEPSDSANSAQGDISTSISMELLQGMVLEEPAPEPEDVQKEPEPEP 75
Query: 68 SQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQK 127
N+ ++ ++ K + + K + K + ++K
Sbjct: 76 EPGNVQKEPEPEKQEIVEDPTIKPEPKKIKEPEKEKPKPKGKPKGKPKNKPKKEVKPQKK 135
Query: 128 ISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVI 187
NKE + +++ ++V S + +R +
Sbjct: 136 ---PINKELPKGDENIDSSANVNDKASTTSAANSNAQVAGSGTDTSEIAAYRSAIRREIE 192
Query: 188 ANWNIPSDFKR-FKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKS 246
++ P+ K K+ +V + F + G + G G L + A A+ S
Sbjct: 193 SHKRYPTRAKIMRKQGKVSVSFNVGADGSLSGAKVTKSSGD-----ESLDKAALDAINVS 247
Query: 247 QAFRLSPSTYKSWRNITLFFV 267
++ P+ + S ++ + F
Sbjct: 248 RSVGTRPAGFPSSLSVQISFT 268
>gi|187479473|ref|YP_787498.1| membrane protein [Bordetella avium 197N]
gi|115424060|emb|CAJ50613.1| putative membrane protein [Bordetella avium 197N]
Length = 290
Score = 59.1 bits (141), Expect = 6e-07, Method: Composition-based stats.
Identities = 26/256 (10%), Positives = 71/256 (27%), Gaps = 18/256 (7%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
+ IS+++H L + P L + + + + ++
Sbjct: 20 AIVISLLIHGGLLAWRF----QLPAAPPPPLSSLDITLVNAHTDDAPIHAQVLAQASVDG 75
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
G + + V S+ GD + T + + + L +
Sbjct: 76 GGNAQAGVASTSLPRTGD--APDTIVLEAMRKRQTQLEQEQTLLLSQLRPADPSPVSRAP 133
Query: 126 QKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKS----SRKRIPSQDAIAI 181
+ S+ ++ + ++ + + + K+ + + +
Sbjct: 134 AQFSEDRDRPGEHAEDQPGVVQNAQVATLANRVQSYSALPRKTFVAPAAQASRYAAYLDN 193
Query: 182 VRNRVIANWNIPSDFKRFKKL--RVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENA 239
R + A + ++ +++ L G + G +L + A
Sbjct: 194 WRAHIEAIGTEHFPAEARGRIYGSLRITMTLRSDGSLAGFEIDKPS-----AHAVLNQAA 248
Query: 240 RKAVIKSQAF-RLSPS 254
R+ V + F P
Sbjct: 249 RRIVQMAAPFAPFPPD 264
>gi|227354821|ref|ZP_03839238.1| TonB family protein [Proteus mirabilis ATCC 29906]
gi|227165139|gb|EEI49970.1| TonB family protein [Proteus mirabilis ATCC 29906]
Length = 267
Score = 59.1 bits (141), Expect = 6e-07, Method: Composition-based stats.
Identities = 24/210 (11%), Positives = 55/210 (26%), Gaps = 6/210 (2%)
Query: 58 EEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLR 117
+ + + + + KR + +
Sbjct: 60 PPKQSTTMIEPRIKIESQQPPIALPRSENGELIEAPKQPAKKRQQQPTPITPKAIKQVKK 119
Query: 118 MPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQD 177
PV + +Q S +++ + E +
Sbjct: 120 QPVVDKTVPIKPRDLTNHNIVQSTSQPSAENLTQHTASSLAGSSRALSEHGIGQGESENH 179
Query: 178 AIAIVRNRVIANWNIPSDFKRFKK-LRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLR 236
I+++R + + P+ +R + V + F L +G++ + G L
Sbjct: 180 YISLLRREIERHKRYPAQARRMQDEGLVVVRFSLTNEGYISSVVLEQTSG-----VASLD 234
Query: 237 ENARKAVIKSQAFRLSPSTYKSWRNITLFF 266
A AV + + P+ I+L F
Sbjct: 235 NAALAAVKRVKPIGPKPNNLSDPLTISLKF 264
>gi|145637151|ref|ZP_01792813.1| TonB [Haemophilus influenzae PittHH]
gi|145269596|gb|EDK09537.1| TonB [Haemophilus influenzae PittHH]
Length = 267
Score = 59.1 bits (141), Expect = 7e-07, Method: Composition-based stats.
Identities = 32/257 (12%), Positives = 81/257 (31%), Gaps = 8/257 (3%)
Query: 12 ILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQEN 71
I+H + + + +N+N S + +S + + + P + E
Sbjct: 16 IVHGIVIGFILWNWNKPSDSANSAQGDISTSI--SMELLQGMVLEEPAPEPENVQKEPEP 73
Query: 72 LVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKA 131
E + + T E + + + + ++ + + K
Sbjct: 74 EPEPEPEPEPEKQEIVEDPTIKPEPKKIKEPEKEKPKPKEKPKEKPKNKPKKEVKPQQKP 133
Query: 132 TNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWN 191
NK+ + +++ ++V S + +R + ++
Sbjct: 134 INKDLPKGDKNIDSSANVNDKASTTSAANSNAQVAGSGTDTSEIAAYRSAIRREIESHKR 193
Query: 192 IPSDFKR-FKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFR 250
P+ K K+ +V + F + G + G G L + A A+ S++
Sbjct: 194 YPTRAKIMRKQGKVSVSFNVGADGSLSGARVTKSSGD-----ESLDKAALDAINVSRSVG 248
Query: 251 LSPSTYKSWRNITLFFV 267
P+ + S ++ + F
Sbjct: 249 ARPAGFPSSLSVQISFT 265
>gi|32351473|gb|AAP76317.1| TonB [Pasteurella multocida]
Length = 256
Score = 59.1 bits (141), Expect = 7e-07, Method: Composition-based stats.
Identities = 33/263 (12%), Positives = 68/263 (25%), Gaps = 20/263 (7%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
G AIS++ H F+ LY + + D I + E
Sbjct: 10 GFAISLLFHASFVSFLY----WIVQKDDDSANGFAADIISTHISMEMLAATVLEEPEPEP 65
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
+ + + +E D E + + + + + D
Sbjct: 66 EPAPPVVEPELPKEEVADPTVKPEPPKEPEKPKEPEKPKEKPKEKPKEKPKKPKKEQRDL 125
Query: 126 QKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNR 185
K + + + + K + + +R
Sbjct: 126 PKSDRQIDSNSSINQQATTTGNITTNNPNLVGKGNSTDE----------VNAYRSALRRE 175
Query: 186 VIANWNIPSDFK-RFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVI 244
+ + P+ + K+ V + F LN G + G E L A AV
Sbjct: 176 IEKHKRYPNRARMMRKQGVVTITFHLNNAGVISNARISKSSGSEE-----LDNAALVAVN 230
Query: 245 KSQAFRLSPSTYKSWRNITLFFV 267
++ P + ++ + F
Sbjct: 231 NARPIGPLPVGMPNEVSVPVSFR 253
>gi|282600392|ref|ZP_05974120.2| putative ferric siderophore transporter, periplasmic energy
transduction protein TonB [Providencia rustigianii DSM
4541]
gi|282565466|gb|EFB71001.1| putative ferric siderophore transporter, periplasmic energy
transduction protein TonB [Providencia rustigianii DSM
4541]
Length = 256
Score = 59.1 bits (141), Expect = 7e-07, Method: Composition-based stats.
Identities = 32/253 (12%), Positives = 72/253 (28%), Gaps = 33/253 (13%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVD--NIYNEDYHSSKYKKIEEPVVQ 63
GL +S++ H ++ F L +S+ E + + + +
Sbjct: 14 GLFVSLVFHGTLAMIFIGWFTSNLPRTGVLPPAISLQLGLYQLEQQNEPEVNNAPKQQMA 73
Query: 64 FKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPY 123
+ Q +V + T T TE +
Sbjct: 74 TREEIQPEVVEKVEKLPQTPLVDNGTLTRVTEKKR------------------------- 108
Query: 124 DKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVR 183
+K K + +S E + ++ Q + V
Sbjct: 109 PPKKQQIQEKKVLEDAPVSPQESMVTSVPTSGSASNNSANFSSNAAAAVSGHQGWQSEVH 168
Query: 184 NRVIANWNIPSDFKRFKKLRV-KMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKA 242
R+ + P RF+ V ++ ++ G ++ ++ G ++L + A
Sbjct: 169 QRLAKSKRYPRAALRFRSTGVSQVKIIVDNHGGLVSASLINSSGT-----KILDKEAMAT 223
Query: 243 VIKSQAFRLSPST 255
+ ++ F + P T
Sbjct: 224 IQRAAPFPVPPET 236
>gi|261856739|ref|YP_003264022.1| TonB family protein [Halothiobacillus neapolitanus c2]
gi|261837208|gb|ACX96975.1| TonB family protein [Halothiobacillus neapolitanus c2]
Length = 277
Score = 59.1 bits (141), Expect = 7e-07, Method: Composition-based stats.
Identities = 30/259 (11%), Positives = 72/259 (27%), Gaps = 14/259 (5%)
Query: 4 ENGLAISMILHVMFLLL-LYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
G IS +LH + + LYF S+ ++ V + + EP
Sbjct: 5 RTGFVISALLHAALVGVGLYFWLKPTPQTDGSKEVVVPVSLASFAPATAKPRPQPTEPAQ 64
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
+ + + ++Q + + E K K + +
Sbjct: 65 KPIDKPEPEEDEPLNPSPGAKPEAEQIQKPELKPEPKPKPEQKNVAKSVSTPKPKQTHQS 124
Query: 123 YDKQ-------KISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPS 175
+ K A + + + ++ + +
Sbjct: 125 APPKPPAPKVHKTPAAPHPTASAPRMQPSTEQQPERQAESAPPQNPAPDGTTPDELDQIR 184
Query: 176 QDAIAIVRNRVIANWNIPSDFKR-FKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRM 234
+ + + PS +R ++ +++ F + G + V+ T
Sbjct: 185 LQYQSALAEAIEREKFYPSLARRLNQQGLIRVGFTVLADGRITNIHLVEPSAAT-----A 239
Query: 235 LRENARKAVIKSQAFRLSP 253
L + A +A+ + F+ P
Sbjct: 240 LNQGAIEAIKRVGQFKPIP 258
>gi|121998995|ref|YP_001003782.1| TonB domain-containing protein [Halorhodospira halophila SL1]
gi|121590400|gb|ABM62980.1| Cell division and transport-associated protein TolA [Halorhodospira
halophila SL1]
Length = 316
Score = 59.1 bits (141), Expect = 7e-07, Method: Composition-based stats.
Identities = 19/150 (12%), Positives = 46/150 (30%), Gaps = 9/150 (6%)
Query: 121 SPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIA 180
+ ++ + + + ++ + R ++ + E+ R + Q A
Sbjct: 171 AEQRAEEQDRLREEIRQRMEEEREAQRQQELEAERQRQEAAQQEAEEQRRLQGQQQRYTA 230
Query: 181 IVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENAR 240
+ V NW P+ + L + + G V V G + +
Sbjct: 231 AIAEAVERNWRRPTGTP--EGLEAVVRVSFSSSGDVRRVEVVSGSGDSG-----FDRSVE 283
Query: 241 KAVIKSQAFRLS--PSTYKSWRNITLFFVP 268
+AV + + + + +T F P
Sbjct: 284 RAVQAASPVPFPDEAALQERMQTLTFRFAP 313
>gi|304412052|ref|ZP_07393662.1| TonB family protein [Shewanella baltica OS183]
gi|307305947|ref|ZP_07585693.1| TonB family protein [Shewanella baltica BA175]
gi|304349602|gb|EFM14010.1| TonB family protein [Shewanella baltica OS183]
gi|306911440|gb|EFN41866.1| TonB family protein [Shewanella baltica BA175]
Length = 268
Score = 58.8 bits (140), Expect = 7e-07, Method: Composition-based stats.
Identities = 27/250 (10%), Positives = 76/250 (30%), Gaps = 16/250 (6%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
L ++ LH+ ++ ++ ++ P + + + I +
Sbjct: 16 ALLLAAFLHIALTAAVF--WSPAVITPSGQAKAVGNGGIEISLGPAGSAASTLPQTTAPV 73
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
+ +++ + + T + K + + + +S + SP +
Sbjct: 74 AKQKSEPIKEQLDKPARLPPITKKVTPTLSTKPKPIAPTPQHERTTQSEVNEQHSSPTET 133
Query: 126 QKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNR 185
+ + ++ A+ + + +QD A +
Sbjct: 134 PSPTASAASANEVGQSGEADSAEQNKAASGDNMTGGG--------LLGDTQDFTATLLAW 185
Query: 186 VIANWNIPSDFK-RFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVI 244
+ + P + R ++ V ++F L+++G V G + L A K +
Sbjct: 186 LEQHKEYPRTARNRRQQGTVMLYFVLDRQGRVSASRIEQSSG-----YQTLDAEALKMLE 240
Query: 245 KSQAFRLSPS 254
++Q P
Sbjct: 241 RAQPLPAIPD 250
>gi|94311986|ref|YP_585196.1| TonB-like protein [Cupriavidus metallidurans CH34]
gi|93355838|gb|ABF09927.1| putative TonB-like protein [Cupriavidus metallidurans CH34]
Length = 328
Score = 58.8 bits (140), Expect = 7e-07, Method: Composition-based stats.
Identities = 27/258 (10%), Positives = 76/258 (29%), Gaps = 14/258 (5%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
L LAIS+ +H + L++ V + L V + ++ + +
Sbjct: 40 LTKALAISVAVHALLLMVRVAAPEVFEIKRSD--PQLDVVLVNSKSAVKPRNPTVLAQAN 97
Query: 63 -----QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLR 117
+ + + + GD + E +R ++ +A
Sbjct: 98 LDGGGEHDAQRATTPLPAQTESKEGDLIKMTQRRVEQLEEEQRRLMTQSREAAPAVRSQP 157
Query: 118 MPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQD 177
+ + ++ + ++ E + + + + + S++ +Q
Sbjct: 158 VKPGEQRSDQPTRGQDDRTSNDEMARLEAEIGRNLEHYAKRPKRMQLTATSAQGVDYAQ- 216
Query: 178 AIAIVRNRVIANWNIPSDFKRFKKL--RVKMHFQLNQKGFV----LGKINVDVVGGTELV 231
+R ++ + K + ++ + +N++G + G +
Sbjct: 217 YYDRLRRKIETRGTSDFPQRNGKPIYGQLILVINVNRQGKLGYNRDGYNVEAIDVAKSSG 276
Query: 232 RRMLRENARKAVIKSQAF 249
L A V + F
Sbjct: 277 DPALDRQAVAIVRAAAPF 294
>gi|148546493|ref|YP_001266595.1| Tol-Pal system, TolA [Pseudomonas putida F1]
gi|148510551|gb|ABQ77411.1| Tol-Pal system, TolA [Pseudomonas putida F1]
Length = 372
Score = 58.8 bits (140), Expect = 7e-07, Method: Composition-based stats.
Identities = 20/139 (14%), Positives = 38/139 (27%), Gaps = 11/139 (7%)
Query: 137 DLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDF 196
AE K + + + + D ++R R W P
Sbjct: 239 QEAARKAAEDKKAQALAELLSDTTERQQALADEQGDQVAGDFDDLIRMRAAEGWARPPSA 298
Query: 197 KRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFR----LS 252
+ K + V + + G + G +A AV +
Sbjct: 299 R--KGMTVVLQINMLPDGTITSVSVARSSGDG-----PYDSSAVAAVKNIGRLTEMQGMK 351
Query: 253 PSTYKSWRNITLFFVPSKM 271
PS + +R+ + F P +
Sbjct: 352 PSDFNQYRSFKMTFTPEDL 370
>gi|309780839|ref|ZP_07675580.1| protein TolA [Ralstonia sp. 5_7_47FAA]
gi|308920521|gb|EFP66177.1| protein TolA [Ralstonia sp. 5_7_47FAA]
Length = 342
Score = 58.8 bits (140), Expect = 7e-07, Method: Composition-based stats.
Identities = 38/331 (11%), Positives = 73/331 (22%), Gaps = 72/331 (21%)
Query: 5 NGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVD--------------NIYNEDYH 50
++++ HV+ ++ LYF Q P L + + E
Sbjct: 19 RAFGLAVLTHVLLIIFLYFGVQWQSSTPRGEEAELWDEAAVQQAVQQAAPVPEVKPEPVI 78
Query: 51 SSKYKKIEEPV----VQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKG 106
+ K+EE Q K ++ + ++ + + + +
Sbjct: 79 KAPPAKVEEEADIALEQQKRKREQEAAAAREAELARRAAEERAEAQRQARLKEEQQARQA 138
Query: 107 EQALKESALLRMPVSPYDKQK--------------------------------------- 127
E K A R +K
Sbjct: 139 ELQRKALAEQRAKEKAAEKAAADAAQARKNAQLQAQAEAKAKAEAEAKQKELKAKAAAEA 198
Query: 128 --------ISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAI 179
+ + Q + S
Sbjct: 199 KAKADAERKASESRANAQRQAQLERLRAMAGAGATGTVAGSGGGVGNAQGTGGTASAGYA 258
Query: 180 AIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENA 239
VR +V N + Q+ G +L K G E
Sbjct: 259 ERVRAKVKPNILFDPSAVN-GNPSAVVSVQMAPDGSILSKRLTKSSGNG-----AYDEAV 312
Query: 240 RKAVIKSQAFRLSPSTYKSWRNITLFFVPSK 270
+AV +S + K+ ++ L F P +
Sbjct: 313 MRAVERSDPLPRDTNG-KAPSSVILTFRPKE 342
>gi|217976335|ref|YP_002360482.1| TonB family protein [Methylocella silvestris BL2]
gi|217501711|gb|ACK49120.1| TonB family protein [Methylocella silvestris BL2]
Length = 354
Score = 58.8 bits (140), Expect = 7e-07, Method: Composition-based stats.
Identities = 29/286 (10%), Positives = 81/286 (28%), Gaps = 46/286 (16%)
Query: 7 LAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHS--------------- 51
LA + H + L + + + PI+ E + V+ +
Sbjct: 62 LAACLFAHALILAAILY--ENNVQPPIAPVEEIPVELVQEIPQPKVEPPPPPQPPKKEEK 119
Query: 52 ---------------SKYKKIEEPVVQFKGSSQEN-----LVRDFSVQENGDRFSDQTKT 91
+ + +E + + + + + + +
Sbjct: 120 RPKQKIEDDDRVAYDAPRAENKEKIEREAPDPETKAQRQAPPSEQTAETPSPPQKAEAPP 179
Query: 92 HATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATN---KEQDLQGISFAEKKS 148
AT + +K ++ L K+ + K + +
Sbjct: 180 IATVIAPPEEAPAKIADDKPDAEPLDKATPSPKKKPTEAKSPVVSKAPPTKSKKQSVADQ 239
Query: 149 IDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRF-KKLRVKMH 207
+ ++ PD K + ++I+ ++ ++P+D + ++ +
Sbjct: 240 LASLAPTPDYKVGSAAKPSPVAGGAAKTTYLSILYGLIMRQMHVPADLQNGHQQADGIVA 299
Query: 208 FQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSP 253
F ++++G + + G + A AV ++ F P
Sbjct: 300 FYVDERGNLTHQAIYRASGRPD-----FDAAALNAVRRAAPFPAPP 340
>gi|154174020|ref|YP_001407647.1| putative TonB-dependent colicin receptor protein [Campylobacter
curvus 525.92]
gi|112802299|gb|EAT99643.1| putative TonB-dependent colicin receptor protein [Campylobacter
curvus 525.92]
Length = 279
Score = 58.8 bits (140), Expect = 7e-07, Method: Composition-based stats.
Identities = 28/255 (10%), Positives = 69/255 (27%), Gaps = 18/255 (7%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLV--PISRREMLSVDNIYNEDYHSSKYKKIEEP 60
L +S+ +H+ + L + Q E SV + S ++ +
Sbjct: 8 LPFAFLLSLSVHIFIVFLFMQSAPSQNNGGYIGESGEFQSVRIVS-----SLPIGELMDT 62
Query: 61 VVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPV 120
+ + +Q + E +D + S ++ +
Sbjct: 63 AINSQKQTQLQTPPEQETSEGSLSDTDVKSQITVKKSKVFSKKQTVKRLP-----EKEKK 117
Query: 121 SPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIA 180
S ++ T K++D + +
Sbjct: 118 SNEKRETTEDQTQKDKDTGDSQVDSVSANSVASAPVQGSGDKLSSPNDGNSQSTGASWQG 177
Query: 181 IVRNRVIANWNIPSDF-KRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENA 239
V + + + P++ + ++ +V + ++ + G VL G +L E A
Sbjct: 178 AVMSHLNKHKKYPNEALAKKQEGKVLLLVKIAEDGAVLECKIKKGSG-----VALLDEEA 232
Query: 240 RKAVIKSQAFRLSPS 254
++ P
Sbjct: 233 LNLFKRASPLPKPPQ 247
>gi|301155536|emb|CBW15004.1| membrane spanning protein in TonB-ExbB-ExbD complex [Haemophilus
parainfluenzae T3T1]
Length = 266
Score = 58.8 bits (140), Expect = 8e-07, Method: Composition-based stats.
Identities = 32/261 (12%), Positives = 79/261 (30%), Gaps = 19/261 (7%)
Query: 12 ILHVMFLLLLYFNFNVQ----LLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGS 67
++H L L++N++ P +S++ I + EP
Sbjct: 18 LVHGSILGALFWNWHTPHEAASNAPGEISTTISMEMIQGMRVEEPAPEPEPEPQQAEPEP 77
Query: 68 SQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQK 127
++ +V D + + ++ + K E + + + ++ + K
Sbjct: 78 EKQEVVSDPTKKPEPEKKKEPEKKPEKPIEKPKPKPKEKPKEKPKNEVKAEKAVEMPKN- 136
Query: 128 ISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVI 187
+ + + ++ + S A +R +
Sbjct: 137 --------LPIGDKNINSTATANSKATTTGQPGTNGIQGGSGANTDEHNAYRAAIRREIE 188
Query: 188 ANWNIPSDFK-RFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKS 246
+ P+ K K+ V + F + G + G+ G L A +AV +
Sbjct: 189 RHKRYPARAKMMRKQGIVNVSFSVGADGSLSGERVTKSSGD-----ESLDNAALEAVRSA 243
Query: 247 QAFRLSPSTYKSWRNITLFFV 267
+ P+ + S ++ + F
Sbjct: 244 RPVGPKPAGFASSVSVPISFT 264
>gi|169794644|ref|YP_001712437.1| hypothetical protein ABAYE0459 [Acinetobacter baumannii AYE]
gi|260557077|ref|ZP_05829294.1| TonB family protein [Acinetobacter baumannii ATCC 19606]
gi|332855633|ref|ZP_08435976.1| TonB family domain protein [Acinetobacter baumannii 6013150]
gi|332868554|ref|ZP_08438220.1| TonB family domain protein [Acinetobacter baumannii 6013113]
gi|169147571|emb|CAM85432.1| conserved hypothetical protein; putative tonB-domain [Acinetobacter
baumannii AYE]
gi|260409683|gb|EEX02984.1| TonB family protein [Acinetobacter baumannii ATCC 19606]
gi|332727348|gb|EGJ58784.1| TonB family domain protein [Acinetobacter baumannii 6013150]
gi|332733324|gb|EGJ64517.1| TonB family domain protein [Acinetobacter baumannii 6013113]
Length = 305
Score = 58.8 bits (140), Expect = 8e-07, Method: Composition-based stats.
Identities = 28/262 (10%), Positives = 87/262 (33%), Gaps = 13/262 (4%)
Query: 16 MFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRD 75
+F+LL++F ++ +S+ + H+ + ++ +
Sbjct: 44 IFVLLIHFAMPAPSEQ-STKEIAISIRPTEDVIKHADFLAQADQQGSGAFREAHRMSSNS 102
Query: 76 FSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKE 135
+ + + + + +R + + + + + K+ + + ++
Sbjct: 103 PAPMPSDASTGEAQLETLEKVQQQRELKFEEKVLMTVLSWQKQAEESQRKKALEQLQSQF 162
Query: 136 QDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSD 195
Q + + + +++ + V+ K+ S + R +V N
Sbjct: 163 QAKAAMVASLEAQYLQRQQDFSRQQKIKTVDGIQAKKDASAAYLDKFREKVELYGNRYYP 222
Query: 196 FKRFKK---LRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLS 252
+ ++ V++ LN +G + ++ G +L E A+ +V + F
Sbjct: 223 EEAKQQQLKGEVRLMVILNAQGGIRAIRLLESSG-----HPVLDEAAKASVRRGAPFGRF 277
Query: 253 PSTYKSWRNITLF----FVPSK 270
+ K + + F P++
Sbjct: 278 DANMKDISELRIIRTWRFDPAE 299
>gi|152979662|ref|YP_001345291.1| TonB family protein [Actinobacillus succinogenes 130Z]
gi|150841385|gb|ABR75356.1| TonB family protein [Actinobacillus succinogenes 130Z]
Length = 265
Score = 58.8 bits (140), Expect = 8e-07, Method: Composition-based stats.
Identities = 33/256 (12%), Positives = 77/256 (30%), Gaps = 16/256 (6%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRRE----MLSVDNIYNEDYHSSKYKKIEEPV 61
G S I H + L+ F + V E +S++ + S + EPV
Sbjct: 8 GFIGSAIFHAGLAVALFTAFKDEESVNGQSAEEISTNISMEMLMATTVESIPSQPEPEPV 67
Query: 62 VQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVS 121
Q + ++ + + + + + K K ++ +K++ +
Sbjct: 68 KQAEPEPEKKEMVADPTLKPKPEKPKEKPKEKAKEKPKEKPPEKKQKPVKKTVNETARAA 127
Query: 122 PYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAI 181
P + N + + + + + S + +
Sbjct: 128 PNPQP------NAVVADRVRMGNANVNSKATATSANANSNNANLTGSGASSSEVAEYKSR 181
Query: 182 VRNRVIANWNIPSDFK-RFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENAR 240
+R + + + K+ V + F + G + G V G + L +A
Sbjct: 182 IRREIERHKKYSQRARMMRKQGVVVVAFSIGNNGVISGAHIVKSSGTED-----LDNSAL 236
Query: 241 KAVIKSQAFRLSPSTY 256
AV +++ P+
Sbjct: 237 AAVNAAKSVGPKPAGM 252
>gi|70733114|ref|YP_262887.1| TonB domain-containing protein [Pseudomonas fluorescens Pf-5]
gi|68347413|gb|AAY95019.1| tonB domain protein [Pseudomonas fluorescens Pf-5]
Length = 310
Score = 58.8 bits (140), Expect = 8e-07, Method: Composition-based stats.
Identities = 23/234 (9%), Positives = 60/234 (25%), Gaps = 15/234 (6%)
Query: 26 NVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK----GSSQENLVRDFSVQEN 81
P + + L + + K Q + + ++
Sbjct: 52 GFSFAEPKAISKTLEITLATFKSETKPKKADFLAQDNQQGSGTLDKKAIPKTTEVAPFQD 111
Query: 82 GDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGI 141
+ + + K KA D +
Sbjct: 112 NSVKKVTPPPSVKPEVKDTAPKAAVATTAPKPKKTVTQREEVKKDPTPKAPTPTFDSSQL 171
Query: 142 SFAEKKSIDTVVVRPD---KKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKR 198
S + K+ + ++ +S R R +V N+ +
Sbjct: 172 SSEISSLEAELANEQQLYAKRPRIHRLSAASTMRDKGAWYKDEWRKKVERIGNLNYPEEA 231
Query: 199 FKK---LRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAF 249
+K +++ +N+ G + + ++ G + +L + A++ V + F
Sbjct: 232 RRKQIYGNLRLMVSINRDGSLYEVLVLESSG-----QPLLDQAAQRIVRLAAPF 280
>gi|82524746|ref|YP_406307.1| TonB-like colicin Js sensitive putative membrane protein [Shigella
boydii Sb227]
gi|187734332|ref|YP_001883155.1| TonB family C-terminal domain protein [Shigella boydii CDC 3083-94]
gi|188574168|ref|YP_001919320.1| TonB family C- domain protein [Escherichia coli 53638]
gi|14571874|gb|AAK67302.1|AF283288_2 CjrB [Escherichia coli]
gi|14571883|gb|AAK67306.1| CjrB [Escherichia coli]
gi|14571888|gb|AAK67308.1| CjrB [Shigella flexneri]
gi|81248248|gb|ABB68955.1| TonB-like colicin Js sensitive putative membrane protein [Shigella
boydii Sb227]
gi|187426828|gb|ACD06103.1| TonB family C-terminal domain protein [Shigella boydii CDC 3083-94]
gi|188501343|gb|ACD54478.1| TonB family C- domain protein [Escherichia coli 53638]
gi|320183647|gb|EFW58489.1| Putative tonB protein [Shigella flexneri CDC 796-83]
gi|323171475|gb|EFZ57122.1| tonB family C-terminal domain protein [Escherichia coli LT-68]
Length = 258
Score = 58.8 bits (140), Expect = 8e-07, Method: Composition-based stats.
Identities = 27/248 (10%), Positives = 64/248 (25%), Gaps = 28/248 (11%)
Query: 7 LAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKG 66
S++LH + L + F+ ++ +S + + + SS Q
Sbjct: 17 FICSLLLHGLIFLTFIWRFS-EVQPAMSPAPAIMLQWAEIIEAPSSPLSLPVGIAQQESA 75
Query: 67 SSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQ 126
++E + Q+ T + K + ++ +P
Sbjct: 76 VTEEKQQTED-RQQRPVTEDSDATIEITRKKKSSDGEKKKTRPPRKIKAQTSDSNPTAVS 134
Query: 127 KISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRV 186
+ + + + S + V+ +
Sbjct: 135 SNAAPQALVESSRIAAPFNSDSTKRDNSE--------------------ASWESRVKGHL 174
Query: 187 IANWNIPSDFK-RFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIK 245
P D + R + + F +N +G ++ G L A + +
Sbjct: 175 NRYKRYPGDARKRARTGTAVVTFTVNTEGTIVSSFLEISSGT-----LSLDREAIAVLER 229
Query: 246 SQAFRLSP 253
+Q P
Sbjct: 230 AQPLPKPP 237
>gi|56476927|ref|YP_158516.1| hypothetical protein ebA2648 [Aromatoleum aromaticum EbN1]
gi|56312970|emb|CAI07615.1| hypothetical protein ebA2648 [Aromatoleum aromaticum EbN1]
Length = 304
Score = 58.8 bits (140), Expect = 8e-07, Method: Composition-based stats.
Identities = 37/298 (12%), Positives = 61/298 (20%), Gaps = 42/298 (14%)
Query: 4 ENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQ 63
LA+++ +H+ + L Q P L VD + + K E
Sbjct: 16 WASLALTIAVHLGLIAFLVLGVRWQSTPP----AALEVDLVAAVPARPAPLPKPEPEAKP 71
Query: 64 FKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPY 123
E + + E P P
Sbjct: 72 KPEPKPEPKPEPKPIPRPEPPKPAPPPEPPKAQAKPDIAMKAPEAKKPVKPEPPKPEPPK 131
Query: 124 DKQKISKATNKEQDLQGISFAEK-------------------------------KSIDTV 152
+ K + + + + K
Sbjct: 132 PEPKKPEPKPEPKPPEPKKPEPKPEPKKPEPAKPEPKKPQPVVPPKDDYMAQRLAQETER 191
Query: 153 VVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQ 212
+ ++R R VR +V N P
Sbjct: 192 TQLERMMRADAARASAARNRAAGDAYENAVRTKVRGNLLRPPGLSG--NPEAVFEVDQLP 249
Query: 213 KGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPSTYKSWRNITLFFVPSK 270
G VL G L E +A+ +S L + R + L F P
Sbjct: 250 SGEVLAIRLKRSSG-----IPALDEAIERAIRRSSPLPLPQAKELFERTLELKFKPLD 302
>gi|320175018|gb|EFW50132.1| putative tonB protein [Shigella dysenteriae CDC 74-1112]
Length = 258
Score = 58.8 bits (140), Expect = 8e-07, Method: Composition-based stats.
Identities = 27/248 (10%), Positives = 64/248 (25%), Gaps = 28/248 (11%)
Query: 7 LAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKG 66
S++LH + L + F+ ++ +S + + + SS Q
Sbjct: 17 FICSLLLHGLIFLTFIWRFS-EVQPAMSPAPAIMLQWAEIIEAPSSPLSLPVGIAQQESA 75
Query: 67 SSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQ 126
++E + Q+ T + K + ++ +P
Sbjct: 76 VTEEKQQTED-RQQRPVTEDSDATIEITRKKKSSDGEKKKTRPPRKIKAQTSDSNPTAVS 134
Query: 127 KISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRV 186
+ + + + S + V+ +
Sbjct: 135 SNAAPQALVESSRIAAPFNSDSTKRDNSE--------------------ASWESRVKGHL 174
Query: 187 IANWNIPSDFK-RFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIK 245
P D + R + + F +N +G ++ G L A + +
Sbjct: 175 NRYKRYPGDARKRARTGTAVVTFTVNTEGTIVSSFLEISSGT-----FSLDREAIAVLER 229
Query: 246 SQAFRLSP 253
+Q P
Sbjct: 230 AQPLPKPP 237
>gi|83647597|ref|YP_436032.1| TolA family protein [Hahella chejuensis KCTC 2396]
gi|83635640|gb|ABC31607.1| TolA family protein [Hahella chejuensis KCTC 2396]
Length = 326
Score = 58.8 bits (140), Expect = 8e-07, Method: Composition-based stats.
Identities = 45/318 (14%), Positives = 97/318 (30%), Gaps = 65/318 (20%)
Query: 8 AISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGS 67
S+ILHV L + ++ M +V + + D K P V+ +
Sbjct: 18 LFSVILHVGIAGLAFLGWSAHTPPTPVIPHMQAV--VIDADALKQMTKPEPRPAVKKEEP 75
Query: 68 SQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESA------------- 114
+E + ++ R + + + E +R ++++ ++ + A
Sbjct: 76 KREEEQQKKRQEQEKQRQEELKRQEQAKQEAERKAAAEKKREQEAIALKKKQEEERKKKE 135
Query: 115 -------------------------------------LLRMPVSPYDKQKISKATNKEQD 137
L ++Q K Q+
Sbjct: 136 EEKRQVEEKRKAEEKKQAEEERKKKEAERKKKEEEKRLAEQKQKELERQMKEAREKKRQE 195
Query: 138 LQGISFAEKKSIDTVVVR---PDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPS 194
+ K + + ++ E S ++ R+ + A++ + V W P
Sbjct: 196 ELKKAEELKMAQEAAEYERRLQEQLEAESAAQRQQRELTEVEKYRALIYSAVTQAWLQPP 255
Query: 195 DFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLS-- 252
K L+ ++ QL G +L V G + ++A A + + +
Sbjct: 256 G--EIKGLKAELQLQLLPTGELLSVKVVKSSGNS-----AFDQSAISAANAVRKYSVPSD 308
Query: 253 PSTYKS-WRNITLFFVPS 269
P + +RN+T F P
Sbjct: 309 PGLFNREFRNVTFIFNPK 326
>gi|57505751|ref|ZP_00371677.1| probable tonB transport protein Cj0181 [Campylobacter upsaliensis
RM3195]
gi|57016024|gb|EAL52812.1| probable tonB transport protein Cj0181 [Campylobacter upsaliensis
RM3195]
Length = 248
Score = 58.8 bits (140), Expect = 8e-07, Method: Composition-based stats.
Identities = 27/250 (10%), Positives = 70/250 (28%), Gaps = 36/250 (14%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
G +S+ILH + L+ F+F ++ + VD ++ S +
Sbjct: 8 GFVLSLILHALVLMFFLFSF-------YTQEKSSGVDFKQGLEFTSIMMVSELPIGELKE 60
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
S + + D + + K +
Sbjct: 61 VSIDQKKSNSQDKNKKQDERINLDSQDKNAVLKVQKKIKKQD------------------ 102
Query: 126 QKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNR 185
++++ S K +++ E ++ S + + A++
Sbjct: 103 -----KNQAQKEIANASENSKFKNESLSAPLQSNEDKTQTIISGNAKEQVKSYQALLMAH 157
Query: 186 VIANWNIPSDF-KRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVI 244
+ P + + ++ V++ +++ G VL K +L +
Sbjct: 158 LTKFKKYPQEAIMQKQEGVVRIRVSIDESGNVLSKELKKSCP-----YAVLNDEVLSLFK 212
Query: 245 KSQAFRLSPS 254
++ P
Sbjct: 213 RASPLPKPPK 222
>gi|86151395|ref|ZP_01069610.1| TonB-dependent colicin receptor protein, putative [Campylobacter
jejuni subsp. jejuni 260.94]
gi|315123782|ref|YP_004065786.1| TonB-dependent colicin receptor protein, putative [Campylobacter
jejuni subsp. jejuni ICDCCJ07001]
gi|85841742|gb|EAQ58989.1| TonB-dependent colicin receptor protein, putative [Campylobacter
jejuni subsp. jejuni 260.94]
gi|315017504|gb|ADT65597.1| TonB-dependent colicin receptor protein, putative [Campylobacter
jejuni subsp. jejuni ICDCCJ07001]
Length = 248
Score = 58.8 bits (140), Expect = 8e-07, Method: Composition-based stats.
Identities = 34/250 (13%), Positives = 82/250 (32%), Gaps = 36/250 (14%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
G +S+ILH + L+ F+F ++ + VD ++ S
Sbjct: 8 GFVLSLILHTLVLMFSLFSF-------YTQEKSSGVDFKQGAEFTSIM------------ 48
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
+V +F + E + DQ K+++ + + E+ S + K
Sbjct: 49 ------MVSEFPIGELKEVSIDQKKSNSQDKNK-----KQDERISFNSQDKNAVLKVQKK 97
Query: 126 QKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNR 185
+ ++++ S K +++ E ++ S + + A++
Sbjct: 98 IEKQDENQAQKEIANASENSKFKNESLSAPLQSNEDKTQTIVSGNAKEQVKSYQALLMAH 157
Query: 186 VIANWNIPSDF-KRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVI 244
+ P + + ++ V++ +++ G VL K L + A
Sbjct: 158 LTKFKKYPQEAIMQKQEGVVRIRVSIDESGNVLSKELKKSCP-----YAALNDEALSLFK 212
Query: 245 KSQAFRLSPS 254
++ P
Sbjct: 213 RASPLPKPPK 222
>gi|312963613|ref|ZP_07778094.1| TonB-like protein [Pseudomonas fluorescens WH6]
gi|311282122|gb|EFQ60722.1| TonB-like protein [Pseudomonas fluorescens WH6]
Length = 301
Score = 58.8 bits (140), Expect = 8e-07, Method: Composition-based stats.
Identities = 15/238 (6%), Positives = 58/238 (24%), Gaps = 17/238 (7%)
Query: 24 NFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK----GSSQENLVRDFSVQ 79
L+ P + L + + + Q + +
Sbjct: 39 GVGFTLVEPKQITKTLEITLATFKSEKKPEKADFLAQDNQQGSGTLDKKAVPKTTEVAPF 98
Query: 80 ENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQ 139
++ + + + + +
Sbjct: 99 QDNKVNKVTPPPAPKPEVKQATPKPAVATVAPKPQKAPTQREKTKTEPTPEPVKPAPTFD 158
Query: 140 GISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQD-----AIAIVRNRVIANWNIPS 194
+ +++ S + +++ + + R +V N+
Sbjct: 159 SSTLSDEISSLEAELAHEQQLYAKRPRIYRLNAASTMRDKGAWYKDEWRKKVERIGNLNY 218
Query: 195 DFKRFKK---LRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAF 249
+ ++ +++ +N+ G + ++ G + +L + A++ V + F
Sbjct: 219 PEEARRQQIYGNLRLLVSINRDGTLYEVQVLESSG-----QPLLDQAAQRIVRLAAPF 271
>gi|26987956|ref|NP_743381.1| biopolymer transport protein TolA [Pseudomonas putida KT2440]
gi|24982669|gb|AAN66845.1|AE016313_4 biopolymer transport protein TolA [Pseudomonas putida KT2440]
gi|5514778|emb|CAB50780.1| TolA protein [Pseudomonas putida]
Length = 372
Score = 58.8 bits (140), Expect = 8e-07, Method: Composition-based stats.
Identities = 20/139 (14%), Positives = 38/139 (27%), Gaps = 11/139 (7%)
Query: 137 DLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDF 196
AE K + + + + D ++R R W P
Sbjct: 239 QEAARKAAEDKKAQALAELLSDTTERQQALADEQGDQVAGDFDDLIRMRAAEGWARPPSA 298
Query: 197 KRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFR----LS 252
+ K + V + + G + G +A AV +
Sbjct: 299 R--KGMTVVLQINMLPDGTITNVSVARSSGDG-----PYDSSAVAAVKNIGRLTEMQGMK 351
Query: 253 PSTYKSWRNITLFFVPSKM 271
PS + +R+ + F P +
Sbjct: 352 PSDFNQYRSFKMTFTPEDL 370
>gi|183598751|ref|ZP_02960244.1| hypothetical protein PROSTU_02177 [Providencia stuartii ATCC 25827]
gi|188020953|gb|EDU58993.1| hypothetical protein PROSTU_02177 [Providencia stuartii ATCC 25827]
Length = 251
Score = 58.8 bits (140), Expect = 9e-07, Method: Composition-based stats.
Identities = 36/264 (13%), Positives = 76/264 (28%), Gaps = 24/264 (9%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
+ +S++LH + ++ + N+ + + + +
Sbjct: 8 TVTLSVLLHAVIIMGF----------------IHLAQEEKNQQHQAVMDAPVMSIALTHA 51
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
D + + T K E+ K+ +S +
Sbjct: 52 IEETAPTDSDMTPMVEPEAEIVPPVVVETAQVVLPKKEKKIERPKKKVKEPNKRLSEKKE 111
Query: 126 QKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQ--DAIAIVR 183
+ K + + I+ + + +T P ++ S Q +R
Sbjct: 112 VEQQKVSTNKITKSAITPQQSQQGETAASSPSMGKVGQPKNGMSNLADTQQINAYREKLR 171
Query: 184 NRVIANWNIPSDFKR-FKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKA 242
V + P K K+ ++ F+L + G + V G +L A A
Sbjct: 172 QEVERHKRYPRRAKSMKKQGVAQVQFRLTETGEITSARIVSSSGS-----ELLDNAALAA 226
Query: 243 VIKSQAFRLSPSTYKSWRNITLFF 266
V KSQ+ PS + + F
Sbjct: 227 VEKSQSVGKPPSGFAHIVTFKIEF 250
>gi|292490340|ref|YP_003525779.1| protein TolA [Nitrosococcus halophilus Nc4]
gi|291578935|gb|ADE13392.1| protein TolA [Nitrosococcus halophilus Nc4]
Length = 296
Score = 58.8 bits (140), Expect = 9e-07, Method: Composition-based stats.
Identities = 22/215 (10%), Positives = 67/215 (31%), Gaps = 11/215 (5%)
Query: 45 YNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFS----DQTKTHATENETKR 100
+ + K + Q + +++ + ++ R ++
Sbjct: 71 QQAEAQKREAAKQQAMAEQARQEAKKQQELEQKRRQEQARLKRLEAERKAKKEEARRKAE 130
Query: 101 SSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKE 160
+ + E+ + + + + ++ E++ + + A ++ + + + +
Sbjct: 131 AERKRAEEEKRRAEAEKRRLEEERRRAEEARRKAEEERKKAAAAARRKAEEKRRQQELQA 190
Query: 161 LLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKI 220
+ + +++ ++ RV W P + L V + ++ G V
Sbjct: 191 RIEAEQNAAQVEAALNRFETQIQQRVGRYWTRPPSARD--NLEVVLQVEMLPDGEVRNVK 248
Query: 221 NVDVVGGTELVRRMLRENARKAVIKSQAFRLSPST 255
V G R +A AV K+ + P
Sbjct: 249 VVKTSGD-----RAFDRSAEAAVYKAAPLPVPPDR 278
>gi|120609536|ref|YP_969214.1| TonB family protein [Acidovorax citrulli AAC00-1]
gi|120588000|gb|ABM31440.1| TonB family protein [Acidovorax citrulli AAC00-1]
Length = 286
Score = 58.4 bits (139), Expect = 9e-07, Method: Composition-based stats.
Identities = 34/249 (13%), Positives = 72/249 (28%), Gaps = 10/249 (4%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
L+ LA S+ +H + L + + V L V + + + +
Sbjct: 13 LQIALAFSVAVHAVLLSARFIDPEGFNRVFQDTP--LEVILVNAKSNERPEKAQAIAQSS 70
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
G + + + + A A L MP
Sbjct: 71 LAGGGDADKGRATSPLPYSAITQVGEDFEEAQRKLDAMQEQQAQLLAQLRKQLATMPPPD 130
Query: 123 YDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIV 182
Q + ++++ + I+ + + + + ++R+ +
Sbjct: 131 PRDQSPNTDRVQQEERRRQLLKLLAEIEKRINEENSRPKKRYISPATREE-VYAVYYDAL 189
Query: 183 RNRVIANWNIPSDFKRFKKL--RVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENAR 240
R ++ + +KL + M +N G VL V G R+L + A+
Sbjct: 190 RRKIEDKGTESFPEQAGRKLYGELTMIVTVNHDGRVLDTEIVQGSGN-----RLLDQRAQ 244
Query: 241 KAVIKSQAF 249
V S F
Sbjct: 245 AIVRASGPF 253
>gi|167035190|ref|YP_001670421.1| protein TolA [Pseudomonas putida GB-1]
gi|166861678|gb|ABZ00086.1| protein TolA [Pseudomonas putida GB-1]
Length = 372
Score = 58.4 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 20/138 (14%), Positives = 38/138 (27%), Gaps = 11/138 (7%)
Query: 138 LQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFK 197
AE K + + + + D ++R R W P +
Sbjct: 240 EAARKAAEDKKAQALAELLSDTTERQQALADEQGDQVAGDFDDLIRMRAAEGWARPPSAR 299
Query: 198 RFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFR----LSP 253
K + V + + G + G +A AV + P
Sbjct: 300 --KGMTVVLQINMLPDGTITSVSVARSSGDG-----PYDSSAVAAVKNIGRLTEMQGMKP 352
Query: 254 STYKSWRNITLFFVPSKM 271
S + +R+ + F P +
Sbjct: 353 SDFNQYRSFKMTFTPEDL 370
>gi|322418855|ref|YP_004198078.1| TonB family protein [Geobacter sp. M18]
gi|320125242|gb|ADW12802.1| TonB family protein [Geobacter sp. M18]
Length = 286
Score = 58.4 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 25/264 (9%), Positives = 70/264 (26%), Gaps = 20/264 (7%)
Query: 13 LHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGS----S 68
H+ L+ Q P + D + K P Q +
Sbjct: 20 FHIAVYLVFTTFPPGQPKTPPEPTMVDLTDLPELTPQPLPREKPEPLPQAQAEVKRYAER 79
Query: 69 QENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP-----Y 123
++ + ++ + + + K ++ + + + + R PV+P
Sbjct: 80 RQRVAKEMAPKGRDEVDRMLPKRSIVPQMSRPVPTPRQVSPPQAAQPAREPVAPGAGIFR 139
Query: 124 DKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVR 183
K K ++S ++ + + +
Sbjct: 140 PKSAQVPDRAKLFPSATRMARLEESYREKYRSEVEEGDTRFLNTDDI---LFGSFLRRLE 196
Query: 184 NRVIANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKA 242
+ W+ P + + N++G ++ ++ G ++L + +
Sbjct: 197 TGIYGVWHYPQAALLRGIEGTTPVRITFNRRGEIIRVDMLESSGS-----KILDDEVLRT 251
Query: 243 VIKSQAFRLSPSTY--KSWRNITL 264
+ P Y +++ I
Sbjct: 252 LNALGPVGSFPKGYTGDTFKLIAF 275
>gi|104783068|ref|YP_609566.1| biopolymer transport protein TolA [Pseudomonas entomophila L48]
gi|95112055|emb|CAK16782.1| biopolymer transport protein TolA [Pseudomonas entomophila L48]
Length = 358
Score = 58.4 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 22/138 (15%), Positives = 38/138 (27%), Gaps = 11/138 (7%)
Query: 138 LQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFK 197
AE K + + + + D ++R R W P +
Sbjct: 226 EAARKAAEDKKAQALAELLSDTTERQQALADEQGDQVAGDFDDLIRMRAAEGWARPPSAR 285
Query: 198 RFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFR----LSP 253
K + V + + G V G +A AV L P
Sbjct: 286 --KGMTVVLQINMLPDGTVTNVSVAKSSGDG-----PFDSSAVAAVKNIGRLTEMQGLKP 338
Query: 254 STYKSWRNITLFFVPSKM 271
S + +R+ + F P +
Sbjct: 339 SDFNPYRSFKMTFTPEDL 356
>gi|317051745|ref|YP_004112861.1| hypothetical protein Selin_1575 [Desulfurispirillum indicum S5]
gi|316946829|gb|ADU66305.1| hypothetical protein Selin_1575 [Desulfurispirillum indicum S5]
Length = 270
Score = 58.4 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/255 (10%), Positives = 66/255 (25%), Gaps = 15/255 (5%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNED---YHSSKYKKIEE 59
L N A S+ LH +F+L+ Y ++ V + V I + +
Sbjct: 11 LRNSTAASVALHGVFILI-YALLSLSSSVSPPVTPNIRVHLIPEVADRTTTTQATPQEAP 69
Query: 60 PVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMP 119
+ + R D + + + + L R
Sbjct: 70 VIATSSKQASTAPPRVQPPVPATDVRQQTQAAVDRLRREQENQRLQQQTQQAIDRLARQQ 129
Query: 120 VSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAI 179
+ AT +E + + E ++ + +
Sbjct: 130 AQTAPAPQTPPATRQEVPVA--------PPQATITGNSGAETEAQTVWDMSGDREAISYL 181
Query: 180 AIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENA 239
+ + ++ D + F L++ G ++ + +++
Sbjct: 182 EAITAIITEHFKNRIDLSVEATRDPVVRFSLSRDGHIIPESVSIRTSSGS---QIIDRAL 238
Query: 240 RKAVIKSQAFRLSPS 254
AV + + P+
Sbjct: 239 ILAVQRGNPYMPFPA 253
>gi|220924306|ref|YP_002499608.1| protein TolA [Methylobacterium nodulans ORS 2060]
gi|219948913|gb|ACL59305.1| protein TolA [Methylobacterium nodulans ORS 2060]
Length = 472
Score = 58.4 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 21/133 (15%), Positives = 48/133 (36%), Gaps = 5/133 (3%)
Query: 138 LQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFK 197
L + A+ V+ + + + +++ ++ ++ P +
Sbjct: 338 LASRAPAQSTGSTGREVQRTAALGTTTGTAARLNPSQRDALVGLLQQQIERCYSAPPGAQ 397
Query: 198 RFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPS--- 254
+ + ++ +LN G + + GG+ V R + E A +AV + +R+
Sbjct: 398 Q-GVVLPQLDIRLNPDGSLGADPRILRAGGS-AVDRSIAEAAVRAVRRCAPYRIPAQFAP 455
Query: 255 TYKSWRNITLFFV 267
Y WR I F
Sbjct: 456 FYNDWRVINAEFE 468
>gi|145632494|ref|ZP_01788228.1| TonB [Haemophilus influenzae 3655]
gi|144986689|gb|EDJ93241.1| TonB [Haemophilus influenzae 3655]
Length = 259
Score = 58.4 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 34/257 (13%), Positives = 83/257 (32%), Gaps = 16/257 (6%)
Query: 12 ILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQEN 71
I+H + + + +N+N S ++ + S + ++ V++ EN
Sbjct: 16 IVHGIVIGFILWNWNK---------PSDSANSAQGDISTSISMELLQGMVLEEPAPEPEN 66
Query: 72 LVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKA 131
+ ++ + + + K K + K K + K
Sbjct: 67 VQKEPEPEPEKQEIVEDPTIKPEPKKIKEPEKEKPKPKEKPKEKPENKPKKEVKPQQ-KP 125
Query: 132 TNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWN 191
NK+ + +++ ++V S + +R + ++
Sbjct: 126 INKDLPKGDKNIDSSANVNDKASTTSAANSNAQVAGSGTDTSEIAAYRSAIRREIESHKR 185
Query: 192 IPSDFKR-FKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFR 250
P+ K K+ +V + F + G + G G L + A A+ S++
Sbjct: 186 YPTRAKIMRKQGKVSVSFNVGADGSLSGARVTKSSGD-----ESLDKAALDAINVSRSVG 240
Query: 251 LSPSTYKSWRNITLFFV 267
P+ + S ++ + F
Sbjct: 241 ARPAGFPSSLSVQISFT 257
>gi|260774729|ref|ZP_05883632.1| ferric siderophore transport system binding protein TonB [Vibrio
coralliilyticus ATCC BAA-450]
gi|260609291|gb|EEX35443.1| ferric siderophore transport system binding protein TonB [Vibrio
coralliilyticus ATCC BAA-450]
Length = 298
Score = 58.4 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/267 (11%), Positives = 72/267 (26%), Gaps = 26/267 (9%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIE------- 58
G+A+S+ LH+ + F I + V + +K
Sbjct: 22 GIAVSVGLHLAV---AAYYFYQPKAEFIQPPAAIPVSVALVAPVAAPHVEKPALNTGPEQ 78
Query: 59 ----------EPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQ 108
+ + + + + + + + + K +
Sbjct: 79 NESMDSMASMARPEPLELQKEIQQEVESAPEPTPIVVKETQRPSEIATTVPKPAKPKETK 138
Query: 109 ALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKS 168
K++ + + T ++ +K + V + K+ S
Sbjct: 139 PKKKAESTPVAQVQKQMETPKVETPSVSQQASVAQIKKSAPKLEVEKERKQVQGVSGAFS 198
Query: 169 SRKRIPSQDAIAIVRNRVIANWNIPSDFKR-FKKLRVKMHFQLNQKGFVLGKINVDVVGG 227
+ + + + P KR K+ + F +++ G VLG V G
Sbjct: 199 QHLKQVKVSWKQQLVLHLEQHKQYPRRAKRMRKQGVPLITFTMDRAGQVLGVKLVRSSGT 258
Query: 228 TELVRRMLRENARKAVIKSQAFRLSPS 254
L + A V ++ L P
Sbjct: 259 -----ESLDKEAVDLVYRAMPLPLPPD 280
>gi|284925473|gb|ADC27825.1| TonB transport protein [Campylobacter jejuni subsp. jejuni IA3902]
Length = 248
Score = 58.4 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/250 (10%), Positives = 69/250 (27%), Gaps = 36/250 (14%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
G +S+ILH + L+ F+F ++ + VD ++ S +
Sbjct: 8 GFVLSLILHTLVLMFSLFSF-------YTQEKSSGVDFKQGAEFTSIMMVSELPIGELKE 60
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
S + + D + K +
Sbjct: 61 VSIDQKKSNSQDKNKKQDERISLNSQDKNAVLKVQKKIEKQD------------------ 102
Query: 126 QKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNR 185
++++ S K +++ + ++ S + + A++
Sbjct: 103 -----ENQAQKEIANASENSKFKNESLSAPLQSNKDKTQTIVSGNAKEQVKSYQALLMAH 157
Query: 186 VIANWNIPSDF-KRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVI 244
+ P + + ++ V++ +++ G VL K L + A
Sbjct: 158 LTKFKKYPQEAIIQKQEGVVRIRVSIDESGNVLSKELKKSCP-----YAALNDEALSLFK 212
Query: 245 KSQAFRLSPS 254
++ P
Sbjct: 213 RASPLPKPPK 222
>gi|22124234|ref|NP_667657.1| TonB-like protein [Yersinia pestis KIM 10]
gi|45442884|ref|NP_994423.1| hypothetical protein YP_3130 [Yersinia pestis biovar Microtus str.
91001]
gi|108806102|ref|YP_650018.1| hypothetical protein YPA_0104 [Yersinia pestis Antiqua]
gi|108810215|ref|YP_645982.1| membrane protein [Yersinia pestis Nepal516]
gi|145600777|ref|YP_001164853.1| membrane protein [Yersinia pestis Pestoides F]
gi|150261119|ref|ZP_01917847.1| putative membrane protein [Yersinia pestis CA88-4125]
gi|162419416|ref|YP_001608191.1| TonB domain-containing protein [Yersinia pestis Angola]
gi|165928386|ref|ZP_02224218.1| tonB domain protein [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165936838|ref|ZP_02225404.1| tonB domain protein [Yersinia pestis biovar Orientalis str. IP275]
gi|166009655|ref|ZP_02230553.1| tonB domain protein [Yersinia pestis biovar Antiqua str. E1979001]
gi|166213650|ref|ZP_02239685.1| tonB domain protein [Yersinia pestis biovar Antiqua str. B42003004]
gi|167401334|ref|ZP_02306834.1| tonB domain protein [Yersinia pestis biovar Antiqua str. UG05-0454]
gi|167420833|ref|ZP_02312586.1| tonB domain protein [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167425902|ref|ZP_02317655.1| tonB domain protein [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|167467888|ref|ZP_02332592.1| tonB domain protein [Yersinia pestis FV-1]
gi|170026289|ref|YP_001722794.1| TonB family protein [Yersinia pseudotuberculosis YPIII]
gi|218930918|ref|YP_002348793.1| hypothetical protein YPO3918 [Yersinia pestis CO92]
gi|229839614|ref|ZP_04459773.1| putative membrane protein [Yersinia pestis biovar Orientalis str.
PEXU2]
gi|229841699|ref|ZP_04461855.1| putative membrane protein [Yersinia pestis biovar Orientalis str.
India 195]
gi|229896703|ref|ZP_04511868.1| putative membrane protein [Yersinia pestis Pestoides A]
gi|229904747|ref|ZP_04519858.1| putative membrane protein [Yersinia pestis Nepal516]
gi|270488730|ref|ZP_06205804.1| TonB family C-terminal domain protein [Yersinia pestis KIM D27]
gi|294505568|ref|YP_003569630.1| hypothetical protein YPZ3_3459 [Yersinia pestis Z176003]
gi|21956998|gb|AAM83908.1|AE013631_4 TonB-like protein [Yersinia pestis KIM 10]
gi|45437751|gb|AAS63300.1| putative membrane protein [Yersinia pestis biovar Microtus str.
91001]
gi|108773863|gb|ABG16382.1| membrane protein [Yersinia pestis Nepal516]
gi|108778015|gb|ABG12073.1| putative membrane protein [Yersinia pestis Antiqua]
gi|115349529|emb|CAL22503.1| putative membrane protein [Yersinia pestis CO92]
gi|145212473|gb|ABP41880.1| membrane protein [Yersinia pestis Pestoides F]
gi|149290527|gb|EDM40604.1| putative membrane protein [Yersinia pestis CA88-4125]
gi|162352231|gb|ABX86179.1| tonB domain protein [Yersinia pestis Angola]
gi|165915080|gb|EDR33691.1| tonB domain protein [Yersinia pestis biovar Orientalis str. IP275]
gi|165919616|gb|EDR36949.1| tonB domain protein [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165991577|gb|EDR43878.1| tonB domain protein [Yersinia pestis biovar Antiqua str. E1979001]
gi|166205052|gb|EDR49532.1| tonB domain protein [Yersinia pestis biovar Antiqua str. B42003004]
gi|166960962|gb|EDR56983.1| tonB domain protein [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167049359|gb|EDR60767.1| tonB domain protein [Yersinia pestis biovar Antiqua str. UG05-0454]
gi|167055050|gb|EDR64849.1| tonB domain protein [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|169752823|gb|ACA70341.1| TonB family protein [Yersinia pseudotuberculosis YPIII]
gi|229678865|gb|EEO74970.1| putative membrane protein [Yersinia pestis Nepal516]
gi|229691038|gb|EEO83091.1| putative membrane protein [Yersinia pestis biovar Orientalis str.
India 195]
gi|229695980|gb|EEO86027.1| putative membrane protein [Yersinia pestis biovar Orientalis str.
PEXU2]
gi|229700310|gb|EEO88344.1| putative membrane protein [Yersinia pestis Pestoides A]
gi|262363635|gb|ACY60356.1| hypothetical protein YPD4_3452 [Yersinia pestis D106004]
gi|262367565|gb|ACY64122.1| hypothetical protein YPD8_3454 [Yersinia pestis D182038]
gi|270337234|gb|EFA48011.1| TonB family C-terminal domain protein [Yersinia pestis KIM D27]
gi|294356027|gb|ADE66368.1| hypothetical protein YPZ3_3459 [Yersinia pestis Z176003]
gi|320013484|gb|ADV97055.1| putative membrane protein [Yersinia pestis biovar Medievalis str.
Harbin 35]
Length = 267
Score = 58.4 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 25/250 (10%), Positives = 73/250 (29%), Gaps = 21/250 (8%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
G ++ +H+ L L + +P S + ++ ++ + + + Q
Sbjct: 17 GALLACGIHIYALWWL--STASIPAIPTSYPAAIMMELSAEPEFMQNLPQNSVVGITQNI 74
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
+ D D + + + + + + P +K
Sbjct: 75 IEPAVEQRVNQ-----PDDIVDLPTLPEQPEGQREITRKEPIKVKRPAENRATSRKPVNK 129
Query: 126 QKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNR 185
+ + + S + V + SS ++ + ++
Sbjct: 130 ETQESDSKQSSPAAAASAMLSGTSQQVAA--------AVNSDSSHRQQAQVSWKSRLQGH 181
Query: 186 VIANWNIPSDFK-RFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVI 244
++ PS + + ++ + F +++ G+V G + L A +
Sbjct: 182 LMGFKRYPSSARKQQQQGTAMIRFVVDKNGYVSSVQLSHSSGTS-----ALDREALAIIK 236
Query: 245 KSQAFRLSPS 254
++Q P+
Sbjct: 237 RAQPLPKPPA 246
>gi|296327924|ref|ZP_06870459.1| TonB protein [Fusobacterium nucleatum subsp. nucleatum ATCC 23726]
gi|296154880|gb|EFG95662.1| TonB protein [Fusobacterium nucleatum subsp. nucleatum ATCC 23726]
Length = 263
Score = 58.0 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 34/274 (12%), Positives = 74/274 (27%), Gaps = 18/274 (6%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
++ + IS++LH++ L QL + +++ + + S
Sbjct: 1 MKKYILISLVLHLIILFGFGVMQTAQLGKDEPKNQVVPIAFV--AKQTSENPGGKVLDTE 58
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
+ + S E + + ++ E + S+ + E
Sbjct: 59 EREKQSPEPPKPKVEKKPEEKKPEEKKVEKKPEKKEIESNIPSKDAKPVEKQPETTTSEN 118
Query: 123 YDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIV 182
+ + S + T S + S+ +
Sbjct: 119 TQSTESADKVESTPSDNNSSSGGGNTSSTGSGDEGFGSNFISDGDGSYIALSSKGINYQI 178
Query: 183 RNRVIANW-NIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARK 241
N V ++ + K+++V + F + KG V K
Sbjct: 179 INEVEPDYPSQAESIGYSKQVKVTVKFLVGLKGNVEKAEITQSHKDLG-----FDAEVMK 233
Query: 242 AVIKSQAFRLSPSTYKSWRNI------TLFFVPS 269
A+ K + Y + +NI T F P
Sbjct: 234 AIKKWK----FKPIYHNGKNIKVYFVKTFVFDPQ 263
>gi|260912745|ref|ZP_05919231.1| outer membrane receptor-mediated transport energizer protein TonB
[Pasteurella dagmatis ATCC 43325]
gi|260633123|gb|EEX51288.1| outer membrane receptor-mediated transport energizer protein TonB
[Pasteurella dagmatis ATCC 43325]
Length = 260
Score = 58.0 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 34/262 (12%), Positives = 71/262 (27%), Gaps = 16/262 (6%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
G AIS++ H F+ LY + + D I +
Sbjct: 10 GFAISLLFHASFVSFLY----WIVQKDDDSANGFAADVISTHISMEMLAATVIAEPEPEP 65
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
Q + + +E D E + + + + P P +
Sbjct: 66 EPVQPEIEPEKPKEEVADPTVKPEPPKEIEKPKEPEKPKEKPKEKPKEKPKDKPKKPKKE 125
Query: 126 QKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNR 185
QK ++++ D + + + +R
Sbjct: 126 QKDLPKSDRQIDSNA------SINQQATTTGNLTSNNPNLVGKGNSTNEINAYRSALRRE 179
Query: 186 VIANWNIPSDFK-RFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVI 244
+ + P+ + K+ V + F +N G + G E L A AV
Sbjct: 180 IEKHKRYPNRARMMRKQGVVTLIFHINSAGAISNIRITKSSGSEE-----LDNAALAAVN 234
Query: 245 KSQAFRLSPSTYKSWRNITLFF 266
++ P+ + ++ + F
Sbjct: 235 SARPIGPLPAGMANEISVPVSF 256
>gi|182679968|ref|YP_001834114.1| TonB family protein [Beijerinckia indica subsp. indica ATCC 9039]
gi|182635851|gb|ACB96625.1| TonB family protein [Beijerinckia indica subsp. indica ATCC 9039]
Length = 264
Score = 58.0 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/253 (12%), Positives = 69/253 (27%), Gaps = 18/253 (7%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
L +G A+S+ LH + F + P V + + +K+ +
Sbjct: 15 LYHGFALSLGLHAAL--AIPFGLHALEHPPEEEDIPPLVVELQGLVSTNQSNEKLLQETK 72
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
+ + D T+ + ++ + KE S
Sbjct: 73 GEAKQADAASAAQPEAKPMQDDGPQPETDQPTQLKASEQDKTEKKDPEKEKVPEVAETSA 132
Query: 123 YDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIV 182
+ ++ E++ T+ + + ++ I +
Sbjct: 133 PSPAHTASNSSSAGTNNTKGTEEQQKAQTIRNERE------------AELNRLKEYIKSL 180
Query: 183 RNRVIANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARK 241
+V N P ++ + + F + G + + V + L + A K
Sbjct: 181 TKKVQTNLAYPDQARQSGLQGTPTVSFTVLPSGQIRMESLRIVASSGKPE---LDQAAVK 237
Query: 242 AVIKSQAFRLSPS 254
V S F P
Sbjct: 238 TVRASVPFNPPPK 250
>gi|218780984|ref|YP_002432302.1| TonB family protein [Desulfatibacillum alkenivorans AK-01]
gi|218762368|gb|ACL04834.1| TonB family protein [Desulfatibacillum alkenivorans AK-01]
Length = 328
Score = 58.0 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/292 (10%), Positives = 75/292 (25%), Gaps = 38/292 (13%)
Query: 10 SMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSS- 68
S+ LH++ L L+ F + L + P + +
Sbjct: 43 SVALHIIVLALMIF-LPQMVSSKKPSLPYLDIALTSLPTVAPGAPGPKAAPQPKQEEPKV 101
Query: 69 -----------------------------QENLVRDFSVQENGDRFSDQTKTHATENETK 99
+ ++ + A + E
Sbjct: 102 EPLPKEEPKPEPEPVKEPEPVKEPEPVKLKPAEPKEVKQPVVVKPVEAAEISTAPKKEPD 161
Query: 100 RSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKK 159
+ + + + ++ ++ I+ K + +
Sbjct: 162 EIPVLTSLKKRTYKVEVAKEKALREIKERVESGRPSSVEDAIAKMRKNPGERPKQEAQQG 221
Query: 160 ELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGK 219
E ++ +I I V + NW +P F L+ + ++ G V
Sbjct: 222 EGDGGRAYLTKMQILRNRYIGEVGELMQKNWAMPQQFTGT-GLKAVVWLTVHPDGNVTDI 280
Query: 220 INVDVVGGTELVRRMLRENARKAVIKSQAF-RLSPSTYKSWRNITLFFVPSK 270
+ G + ++A +AV KS P K+ ++++ F
Sbjct: 281 YVNERSGD-----KFFDDSAERAVRKSIPTKPFPPELEKAPLDMSVNFSAPD 327
>gi|241662340|ref|YP_002980700.1| protein TolA [Ralstonia pickettii 12D]
gi|240864367|gb|ACS62028.1| protein TolA [Ralstonia pickettii 12D]
Length = 342
Score = 58.0 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 38/331 (11%), Positives = 73/331 (22%), Gaps = 72/331 (21%)
Query: 5 NGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVD--------------NIYNEDYH 50
++++ HV+ ++ LYF Q P L + + E
Sbjct: 19 RAFGLAVLTHVLLVIFLYFGVQWQSSTPRGEEAELWDEAAVQQAVQQAAPVPEVKPEPVI 78
Query: 51 SSKYKKIEEPV----VQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKG 106
+ K+EE Q K ++ + ++ + + + +
Sbjct: 79 KAPPAKVEEEADIALEQQKRKREQEAAAAREAELARRAAEERAEAQRQARLKEEQQARQA 138
Query: 107 EQALKESALLRMPVSPYDKQK--------------------------------------- 127
E K A R +K
Sbjct: 139 ELQRKALAEQRAKEKAAEKAAADAAQARKNAQLQAQAEAKAKAEAEAKQKELKAKAAAEA 198
Query: 128 --------ISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAI 179
+ + Q + S
Sbjct: 199 KAKADAERKASESRANAQRQAQLERLRAMAGAGATGTVAGSGGGVGNAQGTGGTASAGYA 258
Query: 180 AIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENA 239
VR +V N + Q+ G +L K G E
Sbjct: 259 ERVRAKVKPNILFDPSAVN-GNPSAVVSVQMAPDGSILSKRLTKSSGNG-----AYDEAV 312
Query: 240 RKAVIKSQAFRLSPSTYKSWRNITLFFVPSK 270
+AV +S + K+ ++ L F P +
Sbjct: 313 MRAVERSDPLPRDING-KAPSSVILTFRPKE 342
>gi|30249591|ref|NP_841661.1| putative TonB protein [Nitrosomonas europaea ATCC 19718]
gi|30138954|emb|CAD85537.1| putative TonB protein [Nitrosomonas europaea ATCC 19718]
Length = 304
Score = 58.0 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/269 (9%), Positives = 71/269 (26%), Gaps = 27/269 (10%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPV 61
R+ L IS++LH + + + + + V + ++ K+
Sbjct: 16 RIFPALLISLLLHTAIIA--GVSLSPPEQKTTKVAKSMDVILVNSKSQTRPVDAKVLAQA 73
Query: 62 VQFKGSSQENLVRDFSVQENGDRFSDQ--------TKTHATENETKRSSSSKGEQALKES 113
G + R + + K ++++ + + +
Sbjct: 74 NLDGGGNVAEDRRAKTPLPVLPGVKPVTSLSEVTRKTRQLEKEVKKLLTAAESKAKVVQP 133
Query: 114 ALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRI 173
P Q A N + + + + + + D + + ++
Sbjct: 134 LPHTKPGQDKPVQNQPAALNPDNHDNLLQRSLEIARLEAQIAKDHEAYQKRPKRKFIGAR 193
Query: 174 PS----QDAIAIVRNRVIANWNIPSDFKRFKK---LRVKMHFQLNQKGFVLGKINVDVVG 226
+ R +V N+ K+ +++ + G + G
Sbjct: 194 TRDYRFARYLEDWRLKVERIGNLNYPDVARKQKLYGSLQLTVGIRSDGSLESIGIDRSSG 253
Query: 227 GTELVRRMLRENARKAVIKS-----QAFR 250
++L + A V + F
Sbjct: 254 -----VQVLDDAAIHIVRLAARNGFSPFP 277
>gi|87199038|ref|YP_496295.1| hypothetical protein Saro_1016 [Novosphingobium aromaticivorans DSM
12444]
gi|87134719|gb|ABD25461.1| Cell division and transport-associated protein TolA
[Novosphingobium aromaticivorans DSM 12444]
Length = 293
Score = 58.0 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 29/257 (11%), Positives = 62/257 (24%), Gaps = 13/257 (5%)
Query: 23 FNFNVQLLVPISR-REMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQEN 81
+ + + P E+ + I N+ + V G Q V
Sbjct: 33 LSPPGKTVKPPPERMEVTFSEEIANQSTSPDPMAEAAPDVAPELGEPQPEPVVQPQPLPE 92
Query: 82 GDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPY------DKQKISKATNKE 135
+ + + + P + + ++ +
Sbjct: 93 PPKPVPAPPQPKPVPAPPKPAPQPQPRPAPAKPAPPKPQAKPAPAKSAPAKPADESPRRR 152
Query: 136 QDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSD 195
D + + ++ + ++ +W P
Sbjct: 153 PDAPAGGSRIGSDFLKGIPGATRPGTAKTPPAAAIGPEVKSSLAGAISRQIKPHWAAPQG 212
Query: 196 FKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRM----LRENARKAVIKSQAFRL 251
KL + + LN+ G + G+ V G E A +AV + F L
Sbjct: 213 V-DADKLVTILAWDLNEDGSLAGRPRVVRQEGITPANEAQAKRHAEQAIRAVQLAAPFEL 271
Query: 252 SPSTYKSWRNI-TLFFV 267
Y W+ + F
Sbjct: 272 PAMYYSGWKRVAAFRFD 288
>gi|238794896|ref|ZP_04638495.1| TonB domain protein [Yersinia intermedia ATCC 29909]
gi|238725771|gb|EEQ17326.1| TonB domain protein [Yersinia intermedia ATCC 29909]
Length = 258
Score = 58.0 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 25/238 (10%), Positives = 70/238 (29%), Gaps = 13/238 (5%)
Query: 18 LLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFS 77
LL L +V + P + + + + + + Q ++ + + +
Sbjct: 10 LLWLLSTESVLVKHPDDAPAAVMLTLSAETQFTQNVEQNPVVGIQQTF--NEPEVEQQEA 67
Query: 78 VQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQD 137
E+ + ++ E+ +K + + P N+ +
Sbjct: 68 QPEDVSNLLTAPEQPNAVLLVEKELEITEEEPVKIKRPQQQVMKPRKPVIEETPENRNKP 127
Query: 138 LQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFK 197
+ A + S K+ + + ++ ++ P +
Sbjct: 128 SPPAAVASTTLSGESHQIA-----AAANSDSLHKQKVKMNWRSRLQGHLVEFKRYPPRAR 182
Query: 198 -RFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPS 254
+ ++ + F +N+ G VL + G +L A + ++Q P+
Sbjct: 183 KQRQQGIATIRFVVNKDGHVLSAQLIKSSGAA-----ILDHEALALIKRAQPLPKPPT 235
>gi|92113975|ref|YP_573903.1| TonB-like protein [Chromohalobacter salexigens DSM 3043]
gi|91797065|gb|ABE59204.1| Cell division and transport-associated protein TolA
[Chromohalobacter salexigens DSM 3043]
Length = 366
Score = 58.0 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/207 (14%), Positives = 65/207 (31%), Gaps = 11/207 (5%)
Query: 68 SQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQK 127
++ + + R ++ + A ++ ++ + + + ++
Sbjct: 165 KRQQEEAERQAEAERKRQQEEAERQAEAERKRQQEEAERQAEAERKRQQEEAERQAEAER 224
Query: 128 ISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVI 187
+ E Q + + E + + + R + +VR V
Sbjct: 225 KRQQEEAEAARQRELAERAAQANASSLESMISEEQQSIANAEQAREAANGFKNLVRRYVE 284
Query: 188 ANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQ 247
+WN+P R +LR + QL G ++G G + AV ++
Sbjct: 285 QSWNLPPSASR--QLRAIVRIQLLPTGELVGATITQSSGDA-----AFDRSVINAVERAA 337
Query: 248 AFR----LSPSTYKSWRNITLFFVPSK 270
FR L S + +R L F P
Sbjct: 338 PFREMSELDASVQRQFREFNLDFNPED 364
>gi|222054900|ref|YP_002537262.1| TonB family protein [Geobacter sp. FRC-32]
gi|221564189|gb|ACM20161.1| TonB family protein [Geobacter sp. FRC-32]
Length = 284
Score = 58.0 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/258 (10%), Positives = 74/258 (28%), Gaps = 14/258 (5%)
Query: 13 LHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENL 72
LHV ++E V+ + + ++ ++ + +
Sbjct: 20 LHVAVFAFFIL---FPQEKNPPKQEPYMVELRDLPEVKAPPPQEQKKTSRLAEKQRRVPK 76
Query: 73 VRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKAT 132
+ +R + + + + + +E ++ +P +
Sbjct: 77 EIAPKGEREVERLAPPLQPPVAKPGQQATREEIRIPQRQERGIIPREEAPRGESVFKPNR 136
Query: 133 NKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRN---RVIAN 189
++ L + + K K + ++S + +R V
Sbjct: 137 QEQPSLAKLFPSSGKMAKIEENYRKKYGPEVEDGEASFLNTDDILFGSFLRRFETAVYGV 196
Query: 190 WNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQA 248
W P + R + + N+KG V+ ++ G R+L E + + +
Sbjct: 197 WRYPQEAARHGIQGVTPVRITFNRKGEVVDVKLLESSGS-----RILDEEVLRTLREIGR 251
Query: 249 FRLSPSTY--KSWRNITL 264
P Y +++ I
Sbjct: 252 IGSFPRGYTKDTFKLIAF 269
>gi|260220032|emb|CBA27163.1| hypothetical protein Csp_A00910 [Curvibacter putative symbiont of
Hydra magnipapillata]
Length = 288
Score = 58.0 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 33/246 (13%), Positives = 75/246 (30%), Gaps = 16/246 (6%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
L+ L +S+ +H + L + + + V + L V + + +
Sbjct: 9 LQWALGVSIAIHGVLLTVRFVDPEAFNRVFEDKP--LEVILVNAKSNEKPDKAQAIAQTN 66
Query: 63 QFKGSSQENLVRDFSVQENG-----DRFSDQTKTHATENETKRSSSSKGEQALKESALLR 117
G E + + D +++ + +++ + +
Sbjct: 67 MAGGGDVEKGRATSPLPPSALTDIGDSLEEESARKLQSLQEQQNLLLAQVKNQLAALPPP 126
Query: 118 MPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQD 177
P DK + ++ K + L + ++ I+ RP K+ + V +
Sbjct: 127 DPSKLADKAEAAEREEKRKQLIKLLAEIERRINMENSRPKKRYVSPAVREEVYA-----V 181
Query: 178 AIAIVRNRVIANWNIPSDFKRFKKL--RVKMHFQLNQKGFVLGKINVDVVGGT--ELVRR 233
+R + KKL + M +N G VL V G + +
Sbjct: 182 YYDQLRQSIEEKGTENFPQSGGKKLYGELTMIVTINFDGRVLDTEVVQSSGNPVLDKRAQ 241
Query: 234 MLRENA 239
+ +A
Sbjct: 242 AIARSA 247
>gi|39934316|ref|NP_946592.1| tonB transport protein [Rhodopseudomonas palustris CGA009]
gi|39648164|emb|CAE26684.1| possible tonB transport protein [Rhodopseudomonas palustris CGA009]
Length = 290
Score = 58.0 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/254 (11%), Positives = 64/254 (25%), Gaps = 16/254 (6%)
Query: 11 MILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEE-PVVQFKGSSQ 69
++ H + + Q P + VD + + + + P +Q Q
Sbjct: 25 VVAHFGLIAAA-VAWYQQAPSPGVVMPAILVDMAPPSAAPALQPQDLAPGPEMQEAPKPQ 83
Query: 70 ENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKIS 129
+ + + S Q LR + +++I
Sbjct: 84 DEAKQSPPSPALEPPQQLAAQPPEPLAPVVPESEVVLPQPPAAVEPLRRDDAKPKREEIR 143
Query: 130 KATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQ--------DAIAI 181
+ K D++ K R + + Q
Sbjct: 144 RERAKRDDIKRDEAKAKPHAHPPAPRTTAAPKAERQAALAAAPSAGQAAATAALPSYRDR 203
Query: 182 VRNRVIANWNIPSDFKRF-KKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENAR 240
+ + PS+ + ++ + F + + G VLG G L
Sbjct: 204 LAAHLARYKQYPSESRAAREQGTAMLSFTVGRGGQVLGSRLARTSG-----YSALDAETM 258
Query: 241 KAVIKSQAFRLSPS 254
+ ++Q PS
Sbjct: 259 AMIRRAQPLPPFPS 272
>gi|123440528|ref|YP_001004522.1| hypothetical protein YE0129 [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|122087489|emb|CAL10270.1| putative membrane protein [Yersinia enterocolitica subsp.
enterocolitica 8081]
Length = 266
Score = 58.0 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/249 (10%), Positives = 67/249 (26%), Gaps = 14/249 (5%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
++ +H+ + LL N + + + ++ + + Q
Sbjct: 7 SALLTSGVHIYLIWLLS-NTPIPPAYTEVSPVAIMLAVSTEPEFTQHMEQDSVVGITQNI 65
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
L + + + + A E + + K K M
Sbjct: 66 NEPVTELSEHQPEEVSHILTAPEHSNAALIVEREVNEPPKELNKAKRPQQKVMTPRQP-- 123
Query: 126 QKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNR 185
+ + T + + + S + + + ++
Sbjct: 124 -----INERTPENHSNPSTPAVVTSTPLSGESHRVAAAANSHSLHNQQSKMNWKSRLQGH 178
Query: 186 VIANWNIPSDFK-RFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVI 244
+ P + + ++ V + F +N++G VL V G L + A V
Sbjct: 179 LAGFKRYPPHARKQRQQGTVIIRFVVNKEGDVLSTKLVKSSG-----VIALDQEALAVVK 233
Query: 245 KSQAFRLSP 253
++Q P
Sbjct: 234 RAQPLPQPP 242
>gi|118594247|ref|ZP_01551594.1| TonB-like protein [Methylophilales bacterium HTCC2181]
gi|118440025|gb|EAV46652.1| TonB-like protein [Methylophilales bacterium HTCC2181]
Length = 273
Score = 58.0 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/260 (11%), Positives = 70/260 (26%), Gaps = 23/260 (8%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
L S+I+H+ + +Y F + + + I + +
Sbjct: 18 ALLTSLIIHLSLV--MYGGFQYTDIANFEIPSDIELTIIQ---------QPKMNTSSKKS 66
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
+ + + +++ T E K S + L
Sbjct: 67 PQKSPQEPIQATPIKEPIKITNKIITPKVAIEKKALSPKIEHNLVLNEELNPKNKVELID 126
Query: 126 QKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNR 185
+K+ ++ D ++ P K + ++ + R +
Sbjct: 127 EKVRQSKAINTDQLISDLSKLDLTPRNKNGPRVKTVSARTTDYEY-----RLYFEAWRQK 181
Query: 186 VIA--NWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAV 243
V + N P + + +++ L +G + I G L + A K V
Sbjct: 182 VERLGSLNYPEEARAGNLGTLRLTVSLASEGQIKQIIINKSSG-----FDALDKAAIKIV 236
Query: 244 IKSQAFRLSPSTYKSWRNIT 263
+ + + +I
Sbjct: 237 ELGEPYAAFSDKMRKEIDII 256
>gi|51594475|ref|YP_068666.1| tonB protein [Yersinia pseudotuberculosis IP 32953]
gi|186893467|ref|YP_001870579.1| TonB family protein [Yersinia pseudotuberculosis PB1/+]
gi|51587757|emb|CAH19357.1| putative tonB protein [Yersinia pseudotuberculosis IP 32953]
gi|186696493|gb|ACC87122.1| TonB family protein [Yersinia pseudotuberculosis PB1/+]
Length = 267
Score = 58.0 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 25/250 (10%), Positives = 74/250 (29%), Gaps = 21/250 (8%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
G ++ +H+ L L + +P S + ++ ++ + + + Q
Sbjct: 17 GALLACGIHIYALWWL--STASIPAIPTSYPAAIMMELSAEPEFMQNLPQNSVVGITQNI 74
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
+ D D + + + + + + P +K
Sbjct: 75 IEPAVEQRINQ-----PDDIVDLPTLPEQPEGQREITRKEPIKVKRPAENRATSRKPVNK 129
Query: 126 QKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNR 185
+ + + S + V + SS ++ + ++
Sbjct: 130 ETQESDSKQSSPAAAASAMLSGTSQQVAA--------AVNSDSSHRQQAQVSWKSRLQGH 181
Query: 186 VIANWNIPSDFK-RFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVI 244
++ PS + + ++ + F +++ G+V + G + L A +
Sbjct: 182 LMGFKRYPSSARKQQQQGTAMIRFVVDKNGYVSSVQLSNSSGTS-----ALDREALAIIK 236
Query: 245 KSQAFRLSPS 254
++Q P+
Sbjct: 237 RAQPLPKPPA 246
>gi|52424568|ref|YP_087705.1| TonB protein [Mannheimia succiniciproducens MBEL55E]
gi|52306620|gb|AAU37120.1| TonB protein [Mannheimia succiniciproducens MBEL55E]
Length = 249
Score = 57.6 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 25/265 (9%), Positives = 69/265 (26%), Gaps = 26/265 (9%)
Query: 5 NGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQF 64
G S++ H L+F+F D + +I + +
Sbjct: 7 AGFLGSLLFHGGIAATLFFSF-------------------KENDNANGMAAQIIDTNISM 47
Query: 65 KGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYD 124
+ + E + ++ + E+ ++
Sbjct: 48 EMMMATMVEETQPTAEPEPQTKEEIVQKEAVEDPTLKKEKPKEKPKEKPKEKPREKPKEK 107
Query: 125 KQKISKATNK-EQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVR 183
+K+ + + + + + + + +R
Sbjct: 108 AKKVPPPVQQGIKADKIVLSNANANSKATGLSNTINSDNPNLAGQGTGSSEVDAYKIALR 167
Query: 184 NRVIANWNIPSDFK-RFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKA 242
+ + K K+ V + F + G + V G + L +A +A
Sbjct: 168 REIERHKRYSQRAKMMRKQGTVIVAFNIGNDGSLSNARVVKSSGTED-----LDNSALEA 222
Query: 243 VIKSQAFRLSPSTYKSWRNITLFFV 267
V +++ P+ + ++ + F
Sbjct: 223 VKNAKSIGQKPAGMANAISVPIAFT 247
>gi|213158785|ref|YP_002320783.1| TonB family protein [Acinetobacter baumannii AB0057]
gi|215482233|ref|YP_002324415.1| hypothetical protein ABBFA_000486 [Acinetobacter baumannii
AB307-0294]
gi|239504224|ref|ZP_04663534.1| hypothetical protein AbauAB_18058 [Acinetobacter baumannii AB900]
gi|301511252|ref|ZP_07236489.1| hypothetical protein AbauAB05_06728 [Acinetobacter baumannii AB058]
gi|301595634|ref|ZP_07240642.1| hypothetical protein AbauAB059_07477 [Acinetobacter baumannii
AB059]
gi|213057945|gb|ACJ42847.1| TonB family protein [Acinetobacter baumannii AB0057]
gi|213986275|gb|ACJ56574.1| hypothetical protein ABBFA_000486 [Acinetobacter baumannii
AB307-0294]
Length = 294
Score = 57.6 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/262 (10%), Positives = 87/262 (33%), Gaps = 13/262 (4%)
Query: 16 MFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRD 75
+F+LL++F ++ +S+ + H+ + ++ +
Sbjct: 33 IFVLLIHFAMPAPSEQ-STKEIAISIRPTEDVIKHADFLAQADQQGSGAFREAHRMSSNS 91
Query: 76 FSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKE 135
+ + + + + +R + + + + + K+ + + ++
Sbjct: 92 PAPMPSDASTGEAQLETLEKVQQQRELKFEEKVLMTVLSWQKQAEESQRKKALEQLQSQF 151
Query: 136 QDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSD 195
Q + + + +++ + V+ K+ S + R +V N
Sbjct: 152 QAKAAMVASLEAQYLQRQQDFSRQQKIKTVDGIQAKKDASAAYLDKFREKVELYGNRYYP 211
Query: 196 FKRFKK---LRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLS 252
+ ++ V++ LN +G + ++ G +L E A+ +V + F
Sbjct: 212 EEAKQQQLKGEVRLMVILNAQGGIRAIRLLESSG-----HPVLDEAAKASVRRGAPFGRF 266
Query: 253 PSTYKSWRNITLF----FVPSK 270
+ K + + F P++
Sbjct: 267 DANMKDISELRIIRTWRFDPAE 288
>gi|188584275|ref|YP_001927720.1| hypothetical protein Mpop_5089 [Methylobacterium populi BJ001]
gi|179347773|gb|ACB83185.1| conserved hypothetical protein [Methylobacterium populi BJ001]
Length = 158
Score = 57.6 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 18/89 (20%), Positives = 33/89 (37%), Gaps = 2/89 (2%)
Query: 167 KSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVD--V 224
++ D + + + A W +P RF++ + L + G V+G V
Sbjct: 45 RAGETGQAPADTLKALYPALAACWRVPEGLSRFERAEITARLSLRRDGSVIGTPQVTFAK 104
Query: 225 VGGTELVRRMLRENARKAVIKSQAFRLSP 253
G R +L A+ + RL+P
Sbjct: 105 TPGDAKTRDILIRATLDAIARCTPVRLTP 133
>gi|88797450|ref|ZP_01113039.1| hypothetical protein MED297_09871 [Reinekea sp. MED297]
gi|88779622|gb|EAR10808.1| hypothetical protein MED297_09871 [Reinekea sp. MED297]
Length = 290
Score = 57.6 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/276 (10%), Positives = 67/276 (24%), Gaps = 24/276 (8%)
Query: 8 AISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDY-HSSKYKKIEEPVVQFKG 66
++++ H L + ++ E ++ + S + E +
Sbjct: 12 FLALVFHFFVAGLWLLLTEPKTEQRVTLPEPMTTIAVSIAPASTSLPVEDSEPSTIVSAE 71
Query: 67 SSQENLVRDFSVQENGDRFS----------------DQTKTHATENETKRSSSSKGEQAL 110
+Q + + + D + + E +
Sbjct: 72 PAQLPQPTPENSETSVDEPIAVSQAVSEPEPEPEPEPEPEPEPEPEPEPEPEPEPVENVV 131
Query: 111 KESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSR 170
E S ++ K + + + ++
Sbjct: 132 PERVPALPSSVQTALASTSVSSEKAIEETVDEPKNNAVVTQNEDVKTDEGSNENQQEPLA 191
Query: 171 KRIPSQDAIAIVRNRVIANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKINVDVVGGTE 229
Q + V R+ P K+ + F + G + ++ G
Sbjct: 192 TSPVKQHYLDEVSARLSRYKRYPYRLKKQGITGITTIQFVILSNGRIAQLKVLESSGNER 251
Query: 230 LVRRMLRENARKAVIKSQAFRLSPSTYKSWRNITLF 265
L + A V ++ F PS R++TL
Sbjct: 252 -----LDQAAINMVQRASPFPRLPSDLAE-RSLTLT 281
>gi|205356570|ref|ZP_03223333.1| possible TonB transport protein [Campylobacter jejuni subsp. jejuni
CG8421]
gi|205345575|gb|EDZ32215.1| possible TonB transport protein [Campylobacter jejuni subsp. jejuni
CG8421]
Length = 248
Score = 57.6 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/250 (10%), Positives = 68/250 (27%), Gaps = 36/250 (14%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
G +S+ILH + L+ F+F ++ + VD ++ S +
Sbjct: 8 GFVLSLILHALVLIFFLFSF-------YTQEKSSGVDFKQGLEFTSIMMVSELPIGELKE 60
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
S + + D + + K +
Sbjct: 61 VSIDQKKSNSQDKNKKQDERINLDSQDKNAVLKVQKKIKKQD------------------ 102
Query: 126 QKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNR 185
++++ S K +++ E ++ S + + A++
Sbjct: 103 -----KNQAQKEIANASENSKFKNESLSAPLQSNEDKTQTIVSGNAKEQVKSYQALLMAH 157
Query: 186 VIANWNIPSDF-KRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVI 244
+ P + + ++ V++ +++ G VL K L
Sbjct: 158 LTKFKKYPQEAIMQKQEGVVRIRVSIDESGNVLSKELKKSCP-----YAALNNEVLSLFK 212
Query: 245 KSQAFRLSPS 254
++ P
Sbjct: 213 RASPLPKPPK 222
>gi|153948772|ref|YP_001399134.1| TonB domain-containing protein [Yersinia pseudotuberculosis IP
31758]
gi|152960267|gb|ABS47728.1| tonB domain protein [Yersinia pseudotuberculosis IP 31758]
Length = 267
Score = 57.6 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 24/250 (9%), Positives = 72/250 (28%), Gaps = 21/250 (8%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
G ++ +H+ L + +P S + ++ ++ + + + Q
Sbjct: 17 GALLACGIHIYALWW--LSTASIPAIPTSYPAAIMMELSAEPEFMQNLPQNSVVGITQNI 74
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
+ D D + + + + + + P +K
Sbjct: 75 IEPAVEQRINQ-----PDDIVDLPTLPEQPEGQREITRKEPIKVKRPAENRATSRKPVNK 129
Query: 126 QKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNR 185
+ + + S + V + SS ++ + ++
Sbjct: 130 ETQESDSKQSSPAAAASAMLSGTSQQVAA--------AVNSDSSHRQQAQVSWKSRLQGH 181
Query: 186 VIANWNIPSDFK-RFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVI 244
++ PS + + ++ + F +++ G+V G + L A +
Sbjct: 182 LMGFKRYPSSARKQQQQGTAMIRFVVDKNGYVSSVQLSHSSGTS-----ALDREALAIIK 236
Query: 245 KSQAFRLSPS 254
++Q P+
Sbjct: 237 RAQPLPKPPA 246
>gi|192289844|ref|YP_001990449.1| TonB family protein [Rhodopseudomonas palustris TIE-1]
gi|192283593|gb|ACE99973.1| TonB family protein [Rhodopseudomonas palustris TIE-1]
Length = 290
Score = 57.6 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/254 (11%), Positives = 64/254 (25%), Gaps = 16/254 (6%)
Query: 11 MILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEE-PVVQFKGSSQ 69
++ H + + Q P + VD + + + + P +Q Q
Sbjct: 25 VVAHFGLIAAA-VAWYQQAPSPGVVMPAILVDMAPASAAPALQPQDLAPGPEMQEAPKPQ 83
Query: 70 ENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKIS 129
+ + + S Q LR + +++I
Sbjct: 84 DEAKQPPPSPALEPPQQLAAQPPEPLAPVVPESEVVLPQPPAAVEPLRRDDAKPKREEIR 143
Query: 130 KATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQ--------DAIAI 181
+ K D++ K R + + Q
Sbjct: 144 RERAKRDDIKRDEAKAKPHAHPPAPRTTAAPKAERQAALAAAPSAGQAAATAALPSYRDR 203
Query: 182 VRNRVIANWNIPSDFKRF-KKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENAR 240
+ + PS+ + ++ + F + + G VLG G L
Sbjct: 204 LAAHLARYKQYPSESRAAREQGTAMLSFTVGRGGQVLGSRLARTSG-----YSALDAETM 258
Query: 241 KAVIKSQAFRLSPS 254
+ ++Q PS
Sbjct: 259 AMIRRAQPLPPFPS 272
>gi|212704940|ref|ZP_03313068.1| hypothetical protein DESPIG_03007 [Desulfovibrio piger ATCC 29098]
gi|212671604|gb|EEB32087.1| hypothetical protein DESPIG_03007 [Desulfovibrio piger ATCC 29098]
Length = 331
Score = 57.6 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 33/337 (9%), Positives = 84/337 (24%), Gaps = 80/337 (23%)
Query: 4 ENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQ 63
+S+ LH+ LL+ F + V + ++ + + + I + +
Sbjct: 3 WASYLLSLCLHLAVFLLIMF-WPSSPPVNLETPPVM-ISLVGGAPGGNRTPSSILGKMGK 60
Query: 64 FKGSSQE-------------NLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQAL 110
++ + + K +
Sbjct: 61 PTDGPKDVSPPAKKADAAAPERPEVKADPTADKARPVEAKPEPKVERKPEPKHEVKPKPE 120
Query: 111 KESALLRMPVSPYDKQKISK------------------------------------ATNK 134
+ A K++ K +
Sbjct: 121 PKDATPVADKKDKKKKEDKKKDDDKKPEKPKKDDKKKDDKKSTPKDDKKTDKKADKPSKG 180
Query: 135 EQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRI-----------------PSQD 177
+ ++ A +++ V + + ++ R +
Sbjct: 181 DPVAAAMNQARREATSRVESGDKGSSVEQALAQARRNAGGDGGGGGGEGDGPGGGGLNDV 240
Query: 178 AIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRE 237
+ V V NW+ S + L + ++N +G V G +
Sbjct: 241 YMGQVMLAVRPNWSFTSATRL--NLVCVVRVKVNLQGEVEKVDVTQSSGNAQ-----YDS 293
Query: 238 NARKAVI---KSQAFRLSPSTYKSWRNITLFFVPSKM 271
+A A+ ++ AF PS + + + L F +++
Sbjct: 294 SAANAIWRTSRAGAFPPPPS--EQYTELDLVFTLNEL 328
>gi|163854873|ref|YP_001629171.1| hypothetical protein Bpet0568 [Bordetella petrii DSM 12804]
gi|163258601|emb|CAP40900.1| conserved hypothetical protein with tonB-like C-terminal domain
[Bordetella petrii]
Length = 299
Score = 57.2 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/246 (11%), Positives = 68/246 (27%), Gaps = 13/246 (5%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
L GLAIS++LH L F + E++ + + ++
Sbjct: 26 LRIGLAISLLLHAGALAW-RFAAPAPARPTQAPLEIV---LVNAHTQSAPVQAQVVAQSQ 81
Query: 63 QFKGSSQENLVRDFSVQENGDRFSD--QTKTHATENETKRSSSSKGEQALKESALLRMPV 120
G + E V + G+ + + + Q ++
Sbjct: 82 VDGGGNAERGVAATPLPRTGESAETIVLQAMRKRQAQLEAEQMRLLTQLQAQAKAGTERQ 141
Query: 121 SPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIA 180
Y + D G+ + + ++ + + S + +
Sbjct: 142 PVYPWPDATAPGEDVHDQPGVVQNAQVATLASRIQSYNAQPRKEFVAPSAQASRYAAYLD 201
Query: 181 IVRNRVIANWNIPSDFKRFKKL--RVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLREN 238
R+R+ A + ++ +++ + G V +L +
Sbjct: 202 AWRSRIEAIGTQHYPEEARGRIYGSLQITVSVRADGSVADVEIDRPS-----EHAVLNQA 256
Query: 239 ARKAVI 244
AR+ V
Sbjct: 257 ARRIVQ 262
>gi|316935511|ref|YP_004110493.1| TonB family protein [Rhodopseudomonas palustris DX-1]
gi|315603225|gb|ADU45760.1| TonB family protein [Rhodopseudomonas palustris DX-1]
Length = 276
Score = 57.2 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 24/245 (9%), Positives = 57/245 (23%), Gaps = 12/245 (4%)
Query: 11 MILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQE 70
++ H + + Q P ++ VD + + + + QE
Sbjct: 25 VVAHFGLIAAA-VAWYQQAPAPGVSMPVIMVDMAPAPAAPAPQPQDLA-----PGPEMQE 78
Query: 71 NLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISK 130
Q E+ + + + PV +
Sbjct: 79 APAPHEEATPQRPEAPQQLAEQLPESPAPVLPTPEVVLPQQRQPAEPEPVKREPAKPKRD 138
Query: 131 ATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANW 190
+E+ +S + + + ++
Sbjct: 139 HAKREETKPKSQAPAPRSTAPPKAERQAALAAAARAGQAAAAAALPSYRDRLAAHLVRYR 198
Query: 191 NIPSDFKRF-KKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAF 249
P+ + ++ + F + + G VLG G L + ++Q
Sbjct: 199 QYPAGSRAAREQGTAMLSFTVGRGGQVLGSRLARSSGHA-----ALDAETLAMIRRAQPL 253
Query: 250 RLSPS 254
PS
Sbjct: 254 PPFPS 258
>gi|332873007|ref|ZP_08440966.1| TonB family domain protein [Acinetobacter baumannii 6014059]
gi|332738789|gb|EGJ69657.1| TonB family domain protein [Acinetobacter baumannii 6014059]
Length = 305
Score = 57.2 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/262 (10%), Positives = 86/262 (32%), Gaps = 13/262 (4%)
Query: 16 MFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRD 75
+F+LL++F ++ +S+ + H+ + ++ +
Sbjct: 44 IFVLLIHFAMPAPSEQ-STKEIAISIRPTEDVIKHADFLAQADQQGSGAFREAHRMSSNS 102
Query: 76 FSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKE 135
+ + + + + +R + + + + + K+ + + ++
Sbjct: 103 PAPMPSDASTGEAQLETLEKVQQQRELKFEEKVLMTVLSWQKQAEESQRKKALEQLQSQF 162
Query: 136 QDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSD 195
Q + + + +++ + V+ K+ S + R +V N
Sbjct: 163 QAKAAMVASLEAQYLQRQQDFSRQQKIKTVDGIQAKKDASAAYLDKFREKVELYGNRYYP 222
Query: 196 FKRFKK---LRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLS 252
+ ++ V++ LN +G + ++ G +L E A+ +V + F
Sbjct: 223 EEAKQQQLKGEVRLMVILNAQGGIRAIRLLESSG-----HPVLDEAAKASVRRGAPFGRF 277
Query: 253 PSTYKSWRNITLF----FVPSK 270
K + + F P++
Sbjct: 278 DVNMKDISELRIIRTWRFDPAE 299
>gi|170723155|ref|YP_001750843.1| protein TolA [Pseudomonas putida W619]
gi|169761158|gb|ACA74474.1| protein TolA [Pseudomonas putida W619]
Length = 358
Score = 57.2 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 20/138 (14%), Positives = 38/138 (27%), Gaps = 11/138 (7%)
Query: 138 LQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFK 197
AE K + + + + D ++R R W P +
Sbjct: 226 EAARKAAEDKKAQALAELLSDTTERQQALADEQGDQVAGDFDDLIRMRAAEGWARPPSAR 285
Query: 198 RFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFR----LSP 253
K + V + + G + G +A AV L P
Sbjct: 286 --KGMTVVLQINMLPDGTITSVSVSRSSGDG-----PFDSSAVAAVKNIGRLTEMQGLKP 338
Query: 254 STYKSWRNITLFFVPSKM 271
+ + +R+ + F P +
Sbjct: 339 NEFNPYRSFKMTFTPEDL 356
>gi|507345|gb|AAA60460.1| TonB [Haemophilus influenzae]
Length = 261
Score = 57.2 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 34/257 (13%), Positives = 79/257 (30%), Gaps = 14/257 (5%)
Query: 12 ILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQEN 71
I+H + + + +N+N P D + + +EEP + + +E
Sbjct: 16 IVHGIVIGFILWNWN----KPSDSANSAQGDISTSISMELLQGMVLEEPAPEPENVQKEP 71
Query: 72 LVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKA 131
++ E ++ E+ ++ ++ I+K
Sbjct: 72 EPEPEPEKQEIVEDPTIKPEPKKIKEPEKEKPKPKEKPKEKPKNKPKKEVKPQQKPINKD 131
Query: 132 TNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWN 191
K S T ++ +S + +R + ++
Sbjct: 132 LPKGDKNIDSSANVNDKASTTSAANSNAQVAGSGTDTSEIAA----YRSAIRREIESHKR 187
Query: 192 IPSDFKR-FKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFR 250
P+ K K+ +V + F + G + G G L + A A+ S++
Sbjct: 188 YPTRAKIMRKQGKVSVSFNVGADGSLSGARVTKSSGD-----ESLDKAALDAINVSRSVG 242
Query: 251 LSPSTYKSWRNITLFFV 267
P+ + S ++ + F
Sbjct: 243 TRPAGFPSSLSVQISFT 259
>gi|325274581|ref|ZP_08140638.1| Tol-Pal system, TolA [Pseudomonas sp. TJI-51]
gi|324100283|gb|EGB98072.1| Tol-Pal system, TolA [Pseudomonas sp. TJI-51]
Length = 236
Score = 57.2 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/138 (15%), Positives = 39/138 (28%), Gaps = 11/138 (7%)
Query: 138 LQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFK 197
AE K + + + + D ++R R W P +
Sbjct: 104 EAARKAAEDKKAQALAELLSDTTERQQALADEQGDQVAGDFDDLIRMRAAEGWARPPSAR 163
Query: 198 RFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFR----LSP 253
K + V + + G V V G +A AV + P
Sbjct: 164 --KGMTVTLQVSMLPDGTVTSVSVVRSSGDG-----PFDSSAVAAVKNIGRLTEMQGMKP 216
Query: 254 STYKSWRNITLFFVPSKM 271
S + +R+ + F P +
Sbjct: 217 SDFNRYRSFKMTFTPEDL 234
>gi|95928836|ref|ZP_01311582.1| TonB-like [Desulfuromonas acetoxidans DSM 684]
gi|95135181|gb|EAT16834.1| TonB-like [Desulfuromonas acetoxidans DSM 684]
Length = 298
Score = 57.2 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/250 (10%), Positives = 63/250 (25%), Gaps = 14/250 (5%)
Query: 7 LAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKG 66
L +S ++HV LL P + + I + S
Sbjct: 49 LTLSAVVHVGLYSLLAV--------PAQTPQSVEAQPITLVSFAPSAVAAAPVAAQPVVR 100
Query: 67 SSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQ 126
++ + +T + E +
Sbjct: 101 VTEPVTPPPVVAPPKPVERPKVVEPTVPVIKTTIEKQREPEPPPAPRKEEVAVKPEVLPE 160
Query: 127 KISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRV 186
A ++ + D ++ + + + +V+ +V
Sbjct: 161 PPVAAAAAVANVAEQVQGPSMVSASAEQVVDPVPGMAMQGERM--ATELERYVMLVQQQV 218
Query: 187 IANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIK 245
A+ + P +++ + + K F++ G + + RRML A +
Sbjct: 219 QAHLHYPLKARKWHIEGKGKFQFEIAADGSLTDNNVTVLTSCG---RRMLDRAAIHTIRH 275
Query: 246 SQAFRLSPST 255
+ F P
Sbjct: 276 AAPFAAPPQG 285
>gi|330811388|ref|YP_004355850.1| Colicin import membrane protein [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327379496|gb|AEA70846.1| Colicin import membrane protein [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
Length = 359
Score = 57.2 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 20/132 (15%), Positives = 37/132 (28%), Gaps = 11/132 (8%)
Query: 144 AEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLR 203
AE K + + + + ++R R W P + K +
Sbjct: 233 AEDKKAQALADLLSDTPERQQALADEQGDEVAGSYDDLIRARAAEGWARPPSAR--KGMT 290
Query: 204 VKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFR----LSPSTYKSW 259
V + + G V G +A AV + PS + +
Sbjct: 291 VVLQIGMLPDGTVTSVSVAKSSGDG-----PFDASAVAAVKNIGRLTEMQGMKPSDFAPY 345
Query: 260 RNITLFFVPSKM 271
R+ + F P +
Sbjct: 346 RSFKMTFTPEDL 357
>gi|220935398|ref|YP_002514297.1| TonB family protein [Thioalkalivibrio sp. HL-EbGR7]
gi|219996708|gb|ACL73310.1| TonB family protein [Thioalkalivibrio sp. HL-EbGR7]
Length = 308
Score = 57.2 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/129 (17%), Positives = 46/129 (35%), Gaps = 7/129 (5%)
Query: 141 ISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFK 200
++ E++ + R ++E + + ++ Q +A +R+ V W P+D + +
Sbjct: 187 LAAEERRLQEAAAQRAREEEARRQAARQAQLDSQRQQYMAAIRSAVERAWLRPADHQSGQ 246
Query: 201 KLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPSTYKSWR 260
R + + GF+ G + AV +++ P R
Sbjct: 247 --RAVVFVRQAPGGFIQEVRIESCTGN-----PAFCRSVEAAVRRAEPLPSPPDPELFAR 299
Query: 261 NITLFFVPS 269
I F PS
Sbjct: 300 EIRFTFEPS 308
>gi|109898592|ref|YP_661847.1| TonB family protein [Pseudoalteromonas atlantica T6c]
gi|109700873|gb|ABG40793.1| outer membrane transport energization protein TonB
[Pseudoalteromonas atlantica T6c]
Length = 336
Score = 57.2 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/190 (15%), Positives = 65/190 (34%), Gaps = 9/190 (4%)
Query: 69 QENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKI 128
+ + + V+ ++ + K + S++ +P SP +K ++
Sbjct: 127 KPQSIIEPKVEPVIEKTDPEPKLDRIDVPVIEQVSAENALQKIVEPKDEVPESPVNKTQV 186
Query: 129 SKATNKEQDLQGISFAEKKSIDTVVVRPDKKE---LLSKVEKSSRKRIPSQDAIAIVRNR 185
+K +QD+ + + + +S + + D A ++
Sbjct: 187 TKTETNQQDVTKSTTEVAQQNAPAPTAQKATNRGTGSASSTRSGGRAGNANDFFAQLQAH 246
Query: 186 VIANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVI 244
+ P D K+ K + V++ F ++ G+VL G E L + A +
Sbjct: 247 LRKYKTYPRDLKKQKIEGVVQLQFTIDHDGYVLASSIKKSSGSAE-----LDKAALDMLQ 301
Query: 245 KSQAFRLSPS 254
K+ L P
Sbjct: 302 KANPLPLVPD 311
>gi|194289652|ref|YP_002005559.1| hypothetical protein RALTA_A1545 [Cupriavidus taiwanensis LMG
19424]
gi|193223487|emb|CAQ69492.1| conserved hypothetical protein; putative exported protein
[Cupriavidus taiwanensis LMG 19424]
Length = 254
Score = 57.2 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 25/200 (12%), Positives = 47/200 (23%), Gaps = 10/200 (5%)
Query: 51 SSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQAL 110
+ E ++ V + D + R + + EQA
Sbjct: 43 AVPTGVAAELWEPVPEATVPEPVVKPAPTPQPVEEEDADIALQEKQRKARQAEREAEQAR 102
Query: 111 KESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSR 170
+ + R + D Q+ ++ ++ + + S
Sbjct: 103 QRESQARAEAARKDTQRKAQEAQRQASNAERQAELARLRAQAGGAGAAANTGAGSGSS-- 160
Query: 171 KRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTEL 230
PS VR RV N D + + G +L G
Sbjct: 161 -AKPSSGYAERVRQRVKPNIIFNEDVAG--NPAAVVAVHMAPDGSLLSTRLAKSSGNAGW 217
Query: 231 VRRMLRENARKAVIKSQAFR 250
+AV +S
Sbjct: 218 -----DNAVLRAVQRSDPLP 232
>gi|261493322|ref|ZP_05989848.1| TonB2 [Mannheimia haemolytica serotype A2 str. BOVINE]
gi|261496587|ref|ZP_05992967.1| TonB2 [Mannheimia haemolytica serotype A2 str. OVINE]
gi|261307790|gb|EEY09113.1| TonB2 [Mannheimia haemolytica serotype A2 str. OVINE]
gi|261310966|gb|EEY12143.1| TonB2 [Mannheimia haemolytica serotype A2 str. BOVINE]
Length = 299
Score = 57.2 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 22/270 (8%), Positives = 61/270 (22%), Gaps = 34/270 (12%)
Query: 4 ENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQ 63
GL S+ +H + + + + I+ + LS++ + + +
Sbjct: 7 RIGLLASLAIHTALIGGTFAWLHNHKVEKIAEQNSLSMEMVAALLEQPQVAVAPDPITEE 66
Query: 64 FKGSSQENLVRDFSVQENGDRFSDQTKTHAT----------------------------- 94
K E + + +
Sbjct: 67 VKEIEPEKAEVPPEPKLTPEPTPEPEAIPDPTLNPKKEKPKEEKRKERHHHKHKHRHKEK 126
Query: 95 -ENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVV 153
E E + + + + + ++KA + + +
Sbjct: 127 REEEKPKDKPKERPKHHHKHIKALERGPEIKQGIVAKAIPNAAEGEKVVAGVVGGQKNGS 186
Query: 154 VRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRF---KKLRVKMHFQL 210
+ SS ++ + N + K V + F +
Sbjct: 187 PNSTSTTGSANTGASSGNASELAAYKVALQRALQRKANNSYPQREKMMRKTGTVTIKFTV 246
Query: 211 NQKGFVLGKINVDVVGGTELVRRMLRENAR 240
G + ++ G + + +A
Sbjct: 247 TSSGSITNVSVLNSSGNSN-LDNAAVRSAE 275
>gi|301631774|ref|XP_002944970.1| PREDICTED: hypothetical protein LOC100488088 [Xenopus (Silurana)
tropicalis]
Length = 291
Score = 57.2 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 38/255 (14%), Positives = 74/255 (29%), Gaps = 19/255 (7%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
L+ L +S+ +H + L + + N V L V + + +
Sbjct: 13 LQLALGVSVAVHAVLLTVRFVNPESFSRVFQDTP--LEVILVNAKSAEVPDKAQAIAQAS 70
Query: 63 QFKGSSQEN-----LVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLR 117
G + ++ GD F + + E + ++ Q + +
Sbjct: 71 LAGGGDAAQGRATSPLPYAALTTMGDDFEEAQRQLDAMQEQQTLLLAQLRQQVAQMPRTE 130
Query: 118 MPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQD 177
+ + K + L + +K ID RP K+ + V + +
Sbjct: 131 AQTPNSSDSEQATEELKRRQLVKLLAEIEKRIDEENARPKKRYISPAVREEAYAI----- 185
Query: 178 AIAIVRNRVIANW--NIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRML 235
+R ++ N P R + M +N G VL V G +L
Sbjct: 186 YYDALRRKIEDKGTANFPEQAGRKLYGELVMIITVNHNGRVLATEIVQGSGNA-----LL 240
Query: 236 RENARKAVIKSQAFR 250
A + F
Sbjct: 241 DRRAEAIAHAAGPFD 255
>gi|148253730|ref|YP_001238315.1| energy transducer [Bradyrhizobium sp. BTAi1]
gi|146405903|gb|ABQ34409.1| outer membrane transport energization protein TonB [Bradyrhizobium
sp. BTAi1]
Length = 315
Score = 57.2 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 22/191 (11%), Positives = 48/191 (25%), Gaps = 6/191 (3%)
Query: 68 SQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQK 127
+Q + V + + ++ K PV ++K
Sbjct: 117 AQPDPVPEVAPAPEPAPQVALAPEPPRVDDIVLPPPLPKPVEAKPPEQKPAPVPERVERK 176
Query: 128 ISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVI 187
+ ++ + K + + E S R A V +
Sbjct: 177 PVEKKETQEKAEKKPAPPKPAAAQASRPSRVASAPNPGEDSVGAREGQASWNAEVVAHIR 236
Query: 188 ANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQ 247
PSD ++ +++ G ++ + G L A + ++
Sbjct: 237 RYVAYPSDGNGASG-TAIVNVVIDRNGRLVSRRLAGSSGS-----PALDRAALSIIERAA 290
Query: 248 AFRLSPSTYKS 258
F P K
Sbjct: 291 PFPRFPPVMKQ 301
>gi|254360662|ref|ZP_04976811.1| TonB protein [Mannheimia haemolytica PHL213]
gi|110735201|gb|ABG89171.1| TonB [Mannheimia haemolytica]
gi|153091202|gb|EDN73207.1| TonB protein [Mannheimia haemolytica PHL213]
Length = 303
Score = 57.2 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 22/274 (8%), Positives = 61/274 (22%), Gaps = 38/274 (13%)
Query: 4 ENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQ 63
GL S+ +H + + + + I+ + LS++ + + +
Sbjct: 7 RIGLLASLAIHTALIGGTFAWLHNHKVEKIAEQNSLSMEMVAALLEQPQVAVAPDPITEE 66
Query: 64 FKGSSQENLVRDFSVQENGDRFSDQTKTHAT----------------------------- 94
K E + + +
Sbjct: 67 VKEIEPEKAEVPPEPKLTPEPTPEPEAIPDPTLNPKKEKPKEEKRKERHHHKHKHRHKEK 126
Query: 95 -----ENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSI 149
E E + + + + + ++KA + + +
Sbjct: 127 REELQEQEKPKDKPKERPKHHHKHIKALERGPEIKQGIVAKAIPNAAEGEKVVAGVVGGQ 186
Query: 150 DTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRF---KKLRVKM 206
+ SS ++ + N + K V +
Sbjct: 187 KNGSPNSTSTTGSANTGASSGNASELAAYKVALQRALQRKANNSYPQREKMMRKTGTVTI 246
Query: 207 HFQLNQKGFVLGKINVDVVGGTELVRRMLRENAR 240
F + G + ++ G + + +A
Sbjct: 247 KFTITSSGSITNVSVLNSSGNSN-LDNAAVRSAE 279
>gi|221134415|ref|ZP_03560720.1| hypothetical protein GHTCC_05754 [Glaciecola sp. HTCC2999]
Length = 287
Score = 56.8 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 40/286 (13%), Positives = 95/286 (33%), Gaps = 39/286 (13%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
L++ A+S+ H++ LL+L N + I + L++D D +P V
Sbjct: 15 LQSSFALSISAHLLLLLVLIVNVS------IVPPQQLNMDMTPLTDKMPVLNATFIDPAV 68
Query: 63 QFKG--------------------SSQENLVRDFSVQENGDRFSDQTKTHATENETKRSS 102
+E R+ + ++ + + + ++
Sbjct: 69 TQAKFDEAKKQAQAAKAAQQEKARQIRERKRREAAEKKAAEVKAQRLAAEKQAKAKAKAE 128
Query: 103 SSKGEQALKESALLRMPVSPYDKQKISKAT-NKEQDLQGISFAEKKSIDTVVVRPDKKEL 161
+ ++ L+ A + +++ K + + + + + ++
Sbjct: 129 KIRKQRELERKAQEALAEKEAQAKRVEAQRIAKAEQEAKEKARKAQQQRELEEQIAAEQA 188
Query: 162 LSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKIN 221
+ +++ R Q ++++ + N + FK K +++ +L G VL
Sbjct: 189 QIQAQETQRVMTEKQRYSVLIKSTIQRNLITNAAFKGKK---CQLNIRLGIGGVVLKVDI 245
Query: 222 VDVVGGTELVRRMLRENARKAVIKSQAFRLS--PSTYKSWRNITLF 265
V L A AV K +S P+ + R+I L
Sbjct: 246 VAGD-------DALCRAAINAVYKPSNLPVSNDPAVFAQLRDINLT 284
>gi|254490147|ref|ZP_05103338.1| protein TolA [Methylophaga thiooxidans DMS010]
gi|224464633|gb|EEF80891.1| protein TolA [Methylophaga thiooxydans DMS010]
Length = 363
Score = 56.8 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 33/222 (14%), Positives = 71/222 (31%), Gaps = 9/222 (4%)
Query: 50 HSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQA 109
+ K ++ EE ++ + E R + K A + + +
Sbjct: 149 AAEKKRQAEEEARLQAEQKRKAEEAAKAKAEAERREQEAAKAKAEAERKAEEARKRQAEE 208
Query: 110 LKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSS 169
+ A + +++ +A K ++ + + AE + + E + +
Sbjct: 209 EAKRAEEAKRKAEEQRKQAEEAQRKAEEDRKRAEAEARRKAAEADLQRQLEQEQQERDAR 268
Query: 170 RKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTE 229
R + I++ RV W PS+ + L+ + L G V V G +
Sbjct: 269 RVQGVVDQYSLIIQQRVKRFWTRPSNSEA--GLQCTVRVTLLPGGDVKNVTIVKSSGNS- 325
Query: 230 LVRRMLRENARKAVIKSQAFRLSPS--TYKSWRNITLFFVPS 269
+ +A AV K+ ++ R+ F P
Sbjct: 326 ----VFDRSAENAVYKAAPLPQPSDAKAAEALRDFQFIFKPE 363
Score = 42.6 bits (98), Expect = 0.052, Method: Composition-based stats.
Identities = 14/154 (9%), Positives = 39/154 (25%), Gaps = 1/154 (0%)
Query: 9 ISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSS 68
S +LH++ L L + P V+ + S ++ + F+
Sbjct: 14 YSFLLHILILALFVIGMDF-SSTPRKLANSDDVEIVQATVLDQSLVEEEVAKLEAFEKKE 72
Query: 69 QENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKI 128
+E + + + + +K EQ + + + +K
Sbjct: 73 REAEAERQRQVDEKLEEARKALEQKEQEAQDMEQRAKLEQERRRQEAEKEQQQIAELEKQ 132
Query: 129 SKATNKEQDLQGISFAEKKSIDTVVVRPDKKELL 162
+ + + + +
Sbjct: 133 REKEEQRKQKAEQERIAAEKKRQAEEEARLQAEQ 166
>gi|153007828|ref|YP_001369043.1| hypothetical protein Oant_0483 [Ochrobactrum anthropi ATCC 49188]
gi|151559716|gb|ABS13214.1| hypothetical protein Oant_0483 [Ochrobactrum anthropi ATCC 49188]
Length = 122
Score = 56.8 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 18/91 (19%), Positives = 34/91 (37%), Gaps = 5/91 (5%)
Query: 166 EKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKI--NVD 223
+ + + VR+ + A W+ K V + F + G + G +
Sbjct: 17 ASAGGVQAKELTTMNEVRDALNACWSP---LSDSKNSSVTLRFSFKRDGNLKGPPCASAI 73
Query: 224 VVGGTELVRRMLRENARKAVIKSQAFRLSPS 254
V G + R+ A +AV + +L+PS
Sbjct: 74 NVQGDDKTRKAFVIAAIEAVERCTPLKLAPS 104
>gi|197286939|ref|YP_002152811.1| TonB-like protein [Proteus mirabilis HI4320]
gi|194684426|emb|CAR46131.1| TonB-like protein [Proteus mirabilis HI4320]
Length = 267
Score = 56.8 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 24/210 (11%), Positives = 54/210 (25%), Gaps = 6/210 (2%)
Query: 58 EEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLR 117
+ + + + + KR + +
Sbjct: 60 PPKQSTTMIEPRIKIESQQPPIALPRSENGEFIEAPKQPAKKRQQQPTPITPKVIKQVKK 119
Query: 118 MPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQD 177
PV + +Q S +++ + E +
Sbjct: 120 QPVVDKTVPIKPRDLTNHNIVQSTSQPSAENLTQHTASSLAGSSRALSENGIGQGESENH 179
Query: 178 AIAIVRNRVIANWNIPSDFKRFKK-LRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLR 236
I+++R + + P+ +R + V + F L +G++ G L
Sbjct: 180 YISLLRREIERHKRYPAQARRMQDEGLVVVRFSLTNEGYISSVALEQTSG-----VASLD 234
Query: 237 ENARKAVIKSQAFRLSPSTYKSWRNITLFF 266
A AV + + P+ I+L F
Sbjct: 235 NAALAAVKRVKPIGPKPNNLSDPLTISLKF 264
>gi|91776857|ref|YP_546613.1| TonB-like protein [Methylobacillus flagellatus KT]
gi|91710844|gb|ABE50772.1| TonB-like protein [Methylobacillus flagellatus KT]
Length = 316
Score = 56.8 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 28/282 (9%), Positives = 69/282 (24%), Gaps = 39/282 (13%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
L +S + HV+ +L + F + L V + + K +
Sbjct: 15 ALLLSAVFHVILILSVNFEVPDLKYLQDKIPP-LEVVLVNAKTESKPKKADALAQANLDR 73
Query: 66 GSSQ--ENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPY 123
G + + ++ + A R + EQA ++ +
Sbjct: 74 GGNTDLDRQMKTALPPPRKKKTEVAQAEAAEAAAASRPGQERQEQAQQDKVAELERQAQE 133
Query: 124 DKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQD------ 177
+++ E + A P + S
Sbjct: 134 LMTQLNAQKKLESAPAQSAAASMPDNGQQQEAPKNLNARDLIASSLDIARLEAQIAKQQE 193
Query: 178 ----------------------AIAIVRNRVIANWNIPSDFKRFKK---LRVKMHFQLNQ 212
+ R +V N+ ++ ++++ +
Sbjct: 194 EYQKRPKRKELGGRTQEYRFATYVEAWRQKVEKIGNLNYPEAAKEQKLYGKLQLSVDIRA 253
Query: 213 KGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPS 254
G + G ++L + A++ V + + P
Sbjct: 254 DGSIDKIQVTRSSG-----HKILDDAAKRIVELAAPYAAFPE 290
>gi|212709093|ref|ZP_03317221.1| hypothetical protein PROVALCAL_00126 [Providencia alcalifaciens DSM
30120]
gi|212688005|gb|EEB47533.1| hypothetical protein PROVALCAL_00126 [Providencia alcalifaciens DSM
30120]
Length = 260
Score = 56.8 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 30/250 (12%), Positives = 70/250 (28%), Gaps = 29/250 (11%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
GL +S++ H + ++ F L +S+ + ++ + P Q
Sbjct: 18 GLFVSLVFHGILAMIFIGWFTSNLPKTGVLPPAISLQLGLYQLEQQNEPEVNNAPKQQMA 77
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
+ +++ T E KR K Q K +
Sbjct: 78 TREEVEPEVVEKIEKLPQTPLVDNGTLTRVTEKKRPPKKKPVQEKKMVEEAPASTQESEV 137
Query: 126 QKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNR 185
+ + + S + + + V R
Sbjct: 138 TSVPTSGSASNSSANFSSSAAAPV-----------------------SGHHGWESEVHQR 174
Query: 186 VIANWNIPSDFKRFKKLRV-KMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVI 244
+ P RF+ V ++ ++ +G ++ V+ G ++L + A +
Sbjct: 175 LAKAKRYPRAALRFRSTGVSQVKIIVDNQGQLVSASLVNSSGT-----KILDKEALATIQ 229
Query: 245 KSQAFRLSPS 254
++ F + P
Sbjct: 230 RAAPFPMPPE 239
>gi|326315592|ref|YP_004233264.1| TonB family protein [Acidovorax avenae subsp. avenae ATCC 19860]
gi|323372428|gb|ADX44697.1| TonB family protein [Acidovorax avenae subsp. avenae ATCC 19860]
Length = 286
Score = 56.8 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 34/249 (13%), Positives = 72/249 (28%), Gaps = 10/249 (4%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
L+ LA S+ +H + L + + V L V + + + +
Sbjct: 13 LQIALAFSVAVHAVLLSARFIDPEGFNRVFQDTP--LEVILVNAKSNERPEKAQAIAQSS 70
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
G + + + + A A L MP
Sbjct: 71 LAGGGDADKGRATSPLPYSAITQVGEDFEEAQRKLDAMQEQQAQMLAQLRKQLATMPPPD 130
Query: 123 YDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIV 182
Q + ++++ + I+ + + + + ++R+ +
Sbjct: 131 PRDQSPNTDRVQQEERRRQLLKLLAEIEKRINEENSRPKKRYISPATREE-VYAVYYDGL 189
Query: 183 RNRVIANWNIPSDFKRFKKL--RVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENAR 240
R ++ + +KL + M +N G VL V G R+L + A+
Sbjct: 190 RRKIEDKGTESFPEQAGRKLYGELTMIVTVNHDGQVLDTEIVQGSGN-----RLLDQRAQ 244
Query: 241 KAVIKSQAF 249
V S F
Sbjct: 245 AIVRASGPF 253
>gi|323138232|ref|ZP_08073304.1| TolA protein [Methylocystis sp. ATCC 49242]
gi|322396484|gb|EFX99013.1| TolA protein [Methylocystis sp. ATCC 49242]
Length = 411
Score = 56.8 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 16/238 (6%), Positives = 56/238 (23%), Gaps = 5/238 (2%)
Query: 27 VQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFS 86
+ + + K+ P K ++ + +
Sbjct: 163 APEEKDEPKEAEVVKPKPPTRPKPEKEAKETPAPRPPEKPKTEPRTEPKTEAKTEPRLKT 222
Query: 87 DQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEK 146
D+ + + + + S P + + + + + +
Sbjct: 223 DEVAKLLESKKHEEKPAKAENPDGEASDKKAKGAKPKSGDEAAPKSKFDASSIANLLSRE 282
Query: 147 KSIDTVVVRPDKKE---LLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLR 203
T + + + + + + W +
Sbjct: 283 APQRTASTGKEVRTASLGAPEGAAQKLSASMEARIASYIHDHYHPCWASALSL-GGETYA 341
Query: 204 VKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPSTYKSWRN 261
+ F L++ G + G+ + + + + E A +AV + ++ +
Sbjct: 342 PVVEFHLSRDGALEGRPRL-MNASSSPTEKARGEQALQAVRRCSPMKIPAEFMPYYEE 398
>gi|254708686|ref|ZP_05170497.1| TonB family protein [Brucella pinnipedialis B2/94]
gi|261316178|ref|ZP_05955375.1| TonB-dependent receptor protein [Brucella pinnipedialis B2/94]
gi|261295401|gb|EEX98897.1| TonB-dependent receptor protein [Brucella pinnipedialis B2/94]
Length = 308
Score = 56.8 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 25/224 (11%), Positives = 58/224 (25%), Gaps = 2/224 (0%)
Query: 18 LLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFS 77
+ + L+ P R V + + E + + +
Sbjct: 62 VAAMVVELVPDLVAPAEERVSEEVQPETTTEQPEEVQPEPEPEPQPEAKAEPQQVQEPEE 121
Query: 78 VQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQD 137
V + E + + +A + ++ K K K K+ +
Sbjct: 122 VIPDVVEAQKPEVAVPLPVEKPQEKPEEKPKAEPKPEPKKVEKLKPQKPKPEKVKPKKAE 181
Query: 138 LQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFK 197
+ + E S+ + + +++ + N
Sbjct: 182 KAAETREASAPRVDADNGAKVAA-SKRGETSASAGVIWAKWTSRLQSHMARNARFLQGKS 240
Query: 198 RFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARK 241
R + + F ++ G VL G + + L E AR+
Sbjct: 241 RNTRGEAHVAFVIDPSGNVLSARIAVSSGDPAVDQLAL-EAARR 283
>gi|254700333|ref|ZP_05162161.1| TonB family protein [Brucella suis bv. 5 str. 513]
gi|261750829|ref|ZP_05994538.1| TonB [Brucella suis bv. 5 str. 513]
gi|261740582|gb|EEY28508.1| TonB [Brucella suis bv. 5 str. 513]
Length = 308
Score = 56.8 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 25/224 (11%), Positives = 58/224 (25%), Gaps = 2/224 (0%)
Query: 18 LLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFS 77
+ + L+ P R V + + E + + +
Sbjct: 62 VAAMVVELVPDLVAPAEERVSEEVQPETTTEQPEEVQPEPEPEPQPEAKAEPQQVQEPEE 121
Query: 78 VQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQD 137
V + E + + +A + ++ K K K K+ +
Sbjct: 122 VIPDVVEAQKPEVAVPLPVEKPQEKPEEKPKAEPKPEPKKVEKLKPQKPKPEKVKPKKAE 181
Query: 138 LQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFK 197
+ + E S+ + + +++ + N
Sbjct: 182 KAAETREASAPRVDADNGAKVAA-SKRGETSASAGVIWAKWTSRLQSHMARNARFLQGKS 240
Query: 198 RFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARK 241
R + + F ++ G VL G + + L E AR+
Sbjct: 241 RNTRGEAHVAFVIDPSGNVLSARIAVSSGDPAVDQLAL-EAARR 283
>gi|313202238|ref|YP_004040896.1| tonb family protein [Methylovorus sp. MP688]
gi|312441554|gb|ADQ85660.1| TonB family protein [Methylovorus sp. MP688]
Length = 318
Score = 56.8 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 32/287 (11%), Positives = 78/287 (27%), Gaps = 41/287 (14%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
L L +S +LH+ + L F ++ + + V + + +
Sbjct: 12 LGVTLLVSAVLHIAIIASLDFKAPDLQVLK-DKMSSMDVVLVNTKTESKPEKADALAQAN 70
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
+G + + R S D+ QT + + + + E ++
Sbjct: 71 LNRGGNTDADRRMKSALPPPDQPPKQTTPKPEAQSRQSAMQASSTTSEAERRQQKVAELE 130
Query: 123 YDKQKI--------SKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIP 174
Q++ T+ Q+ + + + L S ++ + +
Sbjct: 131 KQVQELMHQLQSTNKVETHPAQEAAAVKPETGEQSASSKSLKAADLLASSLDMARLEAQI 190
Query: 175 SQD------------------------AIAIVRNRVIANWNIPSDFKRFKK---LRVKMH 207
++ + R +V ++ K ++ M
Sbjct: 191 AKQQDEYQKRPKRKFIGARAQEYRFAAYVDNWRQKVEKVGSLNYPEAAKDKKLYGKLTMT 250
Query: 208 FQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPS 254
+ G + G + L + AR+ V + F P
Sbjct: 251 VSIRADGSLDKIEINQSSG-----YKELDDGARRIVELAAPFAPFPE 292
>gi|192292065|ref|YP_001992670.1| TonB family protein [Rhodopseudomonas palustris TIE-1]
gi|192285814|gb|ACF02195.1| TonB family protein [Rhodopseudomonas palustris TIE-1]
Length = 282
Score = 56.8 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 23/238 (9%), Positives = 54/238 (22%), Gaps = 8/238 (3%)
Query: 13 LHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKG-SSQEN 71
H + + V S + VD + + I Q
Sbjct: 30 AHAGAVAWMLLPDPVVPAED-SAPAAIMVDMAAVPEAIVTARTDISPDQKSADDSRPQAE 88
Query: 72 LVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKA 131
++ Q + +T+ + + K +
Sbjct: 89 QRQEPPPQLAEPPVEPNETAPVEQTKTEDRPPVVETAEVPLPRPEPPRAVTPPEPKPTPK 148
Query: 132 TNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWN 191
+ Q + + + + + D + + + +
Sbjct: 149 KKQRSRPQRAAANSQAMRQAQLEARQSDRIAAAQTAFGGASQSPADWRSRLMAHLQRSKR 208
Query: 192 IPSDFKRFKKLRVK-MHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQA 248
S + R+ +HF ++Q G V V G + A V ++
Sbjct: 209 SVSAAADQGRRRIAHVHFAIDQSGNVRSVRLVRSSG-----FAEIDREALALVQRASP 261
>gi|163845251|ref|YP_001622906.1| TonB family protein [Brucella suis ATCC 23445]
gi|163675974|gb|ABY40084.1| TonB family C-terminal domain [Brucella suis ATCC 23445]
Length = 308
Score = 56.8 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 25/224 (11%), Positives = 58/224 (25%), Gaps = 2/224 (0%)
Query: 18 LLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFS 77
+ + L+ P R V + + E + + +
Sbjct: 62 VAAMVVELVPDLVAPAEERVSEEVQPETTTEQPEEVQPEPEPEPQPEAKAEPQQVQEPEE 121
Query: 78 VQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQD 137
V + E + + +A + ++ K K K K+ +
Sbjct: 122 VIPDVVEAQKPEVAVPLPVEKPQEKPEEKPKAEPKPEPKKVEKLKPQKPKPEKVKPKKAE 181
Query: 138 LQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFK 197
+ + E S+ + + +++ + N
Sbjct: 182 KAAETHEASAPRVDADNGAKVAA-SKRGETSASAGVIWAKWTSRLQSHMARNARFLQGKS 240
Query: 198 RFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARK 241
R + + F ++ G VL G + + L E AR+
Sbjct: 241 RNTRGEAHVAFVIDPSGNVLSARIAVSSGDPAVDQLAL-EAARR 283
>gi|256370081|ref|YP_003107592.1| TonB-dependent receptor [Brucella microti CCM 4915]
gi|256000244|gb|ACU48643.1| TonB-dependent receptor [Brucella microti CCM 4915]
Length = 308
Score = 56.8 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 25/224 (11%), Positives = 58/224 (25%), Gaps = 2/224 (0%)
Query: 18 LLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFS 77
+ + L+ P R V + + E + + +
Sbjct: 62 VAAMVVELVPDLVAPAEERVSEEVQPETTTEQPEEVQPEPEPEPQPEAKAEPQQVQEPEE 121
Query: 78 VQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQD 137
V + E + + +A + ++ K K K K+ +
Sbjct: 122 VIPDVVEAQKPEVAVPLPVEKPQEKPEEKPKAEPKPEPKKVEKLKPQKPKPEKVKPKKAE 181
Query: 138 LQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFK 197
+ + E S+ + + +++ + N
Sbjct: 182 KAAETREAGAPRVDADNGAKVAA-SKRGETSASAGVIWAKWTSRLQSHMARNARFLQGKS 240
Query: 198 RFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARK 241
R + + F ++ G VL G + + L E AR+
Sbjct: 241 RNTRGEAHVAFVIDPSGNVLSARIAVSSGDPAVDQLAL-EAARR 283
>gi|222112134|ref|YP_002554398.1| tonb family protein [Acidovorax ebreus TPSY]
gi|221731578|gb|ACM34398.1| TonB family protein [Acidovorax ebreus TPSY]
Length = 286
Score = 56.8 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 29/227 (12%), Positives = 60/227 (26%), Gaps = 5/227 (2%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
L+ L +S+ +H L + + + V L V + + +
Sbjct: 13 LQIALGVSIAVHAALLTVRFVDPESFNRVFQDTP--LEVILVNAQSNERPDKAQAIAQAS 70
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
G + + A + A L +P
Sbjct: 71 LAGGGEAAKGRATSPLPYSALTTIGDDLEEAQRKMDQMLEQQTQMLAQLRKQLAVLPEPD 130
Query: 123 YDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIV 182
K S + + + + I+ + + + + ++R+ +
Sbjct: 131 PRKPSQSTDSQAQDEKRRQLVKLLAEIEKRINEENARPRKRYISPATREE-VYAVYYDAL 189
Query: 183 RNRVIANWNIPSDFKRFKKL--RVKMHFQLNQKGFVLGKINVDVVGG 227
R +V + KKL + M +N G VL V G
Sbjct: 190 RRKVEDKGTQNFPEQGGKKLYGELIMILTVNHDGRVLATEVVQGSGN 236
>gi|289523655|ref|ZP_06440509.1| putative protein TonB [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
gi|289503347|gb|EFD24511.1| putative protein TonB [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
Length = 259
Score = 56.8 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 27/239 (11%), Positives = 77/239 (32%), Gaps = 12/239 (5%)
Query: 7 LAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKG 66
L +S ++H+ +++++ P + + + K + G
Sbjct: 12 LTLSFLIHLALF------WHLEIPKPQALPQRTDSVIAIRLANTNEAEKTSRIAEDKDPG 65
Query: 67 SSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQ 126
++ + + ++ D+ T T+ + S ++ E+ +
Sbjct: 66 PTKPSSPDKPAETKDYKAKEDKGTTKLTKEPASKKSLAEKEKKAPAKERAPEDIDVKATD 125
Query: 127 KISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRV 186
+ + L S + + + + + ++ + + + V
Sbjct: 126 STASPAEVAKPLPRESDGSNTQLPPLQEGLKGQPEIPSTFSDNPQQPIAVASELDILRSV 185
Query: 187 IANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIK 245
+ + S +R ++ V ++ +L+ G V G +L E+A KAV +
Sbjct: 186 KPIYPLISR-RRGEEGTVIVYVRLSSDGKVEEARIHRSSG-----FDLLDESALKAVKQ 238
>gi|23502527|ref|NP_698654.1| TonB-dependent receptor [Brucella suis 1330]
gi|23348525|gb|AAN30569.1| TonB-dependent receptor [Brucella suis 1330]
Length = 308
Score = 56.8 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 25/224 (11%), Positives = 58/224 (25%), Gaps = 2/224 (0%)
Query: 18 LLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFS 77
+ + L+ P R V + + E + + +
Sbjct: 62 VAAMVVELVPDLVAPAEERVSEEVQPETTTEQPEEVQPEPEPEPQPEAKAEPQQVQEPEE 121
Query: 78 VQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQD 137
V + E + + +A + ++ K K K K+ +
Sbjct: 122 VIPDVVEAQKPEVAVPLPVEKPQEKPEEKPKAEPKPEPKKVEKLKPQKPKPEKVKPKKAE 181
Query: 138 LQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFK 197
+ + E S+ + + +++ + N
Sbjct: 182 KAAETREASAPRVDADNGAKVAA-SKRGETSASAGVIWAKWTSRLQSHMARNARFLQGKS 240
Query: 198 RFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARK 241
R + + F ++ G VL G + + L E AR+
Sbjct: 241 RNTRGEAHVAFVIDPSGNVLSARIAVSSGDPAVDQLAL-EAARR 283
>gi|197117886|ref|YP_002138313.1| TonB-like protein [Geobacter bemidjiensis Bem]
gi|197087246|gb|ACH38517.1| TonB-related protein [Geobacter bemidjiensis Bem]
Length = 281
Score = 56.8 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 29/258 (11%), Positives = 72/258 (27%), Gaps = 15/258 (5%)
Query: 14 HVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGS--SQEN 71
HV L++ + P + E VD D +
Sbjct: 21 HVGAFLIIT---TLPQEQPKTAPEPTFVDLTDLPDLQPQPKLPKKAAPKTEIKRYAETPQ 77
Query: 72 LVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYD--KQKIS 129
V + F T + + + A + + PVS + + +
Sbjct: 78 RVAKEMAPKAKGAFDRLTPSLPRLPNLRPAPPGSALPAPQPEETAKAPVSRGEGILKPRA 137
Query: 130 KATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIAN 189
+ L + + ++ + + + + + I + + V
Sbjct: 138 QQLPDRSRLFPSANRLARLEESYREKYRSEVEEGETRFLNTEDIQFGSFLRRLETAVYGV 197
Query: 190 WNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQA 248
W+ P + + N+KG ++ ++ G ++L + +A+
Sbjct: 198 WHYPQAALLRGIEGTTPVKITFNRKGEIVNIDLLESSGS-----KILDDEVFRALNALGP 252
Query: 249 FRLSPSTY--KSWRNITL 264
P Y ++++ I
Sbjct: 253 IGSFPKGYRGETFKLIAF 270
>gi|77461531|ref|YP_351038.1| TonB-like [Pseudomonas fluorescens Pf0-1]
gi|77385534|gb|ABA77047.1| conserved hypothetical protein [Pseudomonas fluorescens Pf0-1]
Length = 299
Score = 56.8 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 22/236 (9%), Positives = 67/236 (28%), Gaps = 15/236 (6%)
Query: 24 NFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQ---- 79
++ P + L + + Q + + + +
Sbjct: 39 GVGFTMVEPKQISKTLEITLATFKSEKKPAKADFLAQENQEGSGTLDKKAIPKTTEVAPF 98
Query: 80 ---ENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQ 136
E + +++ + K++ + K + T
Sbjct: 99 QANEVKKVTPPPAAKPEVQEAAPKAAVTTVAPKPKKAPTKKEEAKTETKPTVDAPTFDSS 158
Query: 137 DLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDF 196
L + + + K+ + ++ +S R R +V N+
Sbjct: 159 QLSSDIASLEAELANEQQLYAKRPRIHRLSAASTMRDKGAWYKDEWRKKVERIGNLNYPD 218
Query: 197 KRFKK---LRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAF 249
+ +K +++ +N+ G + + ++ G + +L + A++ V + F
Sbjct: 219 EARRKQIYGNLRLMVSINRDGSLYEVLVLESSG-----QPLLDQAAQRIVRLAAPF 269
>gi|296445023|ref|ZP_06886984.1| TonB family protein [Methylosinus trichosporium OB3b]
gi|296257444|gb|EFH04510.1| TonB family protein [Methylosinus trichosporium OB3b]
Length = 281
Score = 56.4 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 28/251 (11%), Positives = 58/251 (23%), Gaps = 20/251 (7%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
+S+ H + L + + +L P L V + +
Sbjct: 35 STVLSLAGHGVVLAIFTLTASQRLAAPKGGERALEVQIV--------------AGAQESV 80
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
+ + S E D+T + + + + L
Sbjct: 81 AARTAANFGEASATEPIAEAPDETPLASAPLVETAPDAIVAPRRAPAAQKLERRERRPRA 140
Query: 126 QKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNR 185
Q + A+ + + + S A
Sbjct: 141 HARVLPKGAPQARRREPSADDGDGRERLRSRAETRGGEAGGSTFAGTASSASYRATALAH 200
Query: 186 VIANWNIPSDFKRFKKLRV-KMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVI 244
+ P++ + + V + F L+ G VL G +L E V
Sbjct: 201 LARFKRYPNEARDRNIVGVAVVRFILSPGGAVLAVALARSSGA-----PLLDEATLAMVR 255
Query: 245 KSQAFRLSPST 255
++ F
Sbjct: 256 RAAPFPPMSDG 266
>gi|254482571|ref|ZP_05095810.1| protein TolA [marine gamma proteobacterium HTCC2148]
gi|214037262|gb|EEB77930.1| protein TolA [marine gamma proteobacterium HTCC2148]
Length = 250
Score = 56.4 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 31/275 (11%), Positives = 72/275 (26%), Gaps = 52/275 (18%)
Query: 5 NGLAISMILHVMFLLLLYFNFNVQLLVPI---SRREMLSVDNIYNEDYHSSKYKKIEEPV 61
+S+ LH + L+ L FN+ I ++++ + ++ K
Sbjct: 18 RPALVSLTLHALLLVALTFNWANSESEVIKVKPAPKVINARLVDVSEFQPKPKPKPRAKP 77
Query: 62 VQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVS 121
+ + + + E K E+ +
Sbjct: 78 KSTPKVAVSKPKPVAKPKPKPVAKTPVKPAPKPKVEPKPDPRITEEELAAITRADMARAM 137
Query: 122 PYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAI 181
+ + ++ + ++
Sbjct: 138 AAEDDVLEA-------------------------------------TATADEMAASYASL 160
Query: 182 VRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARK 241
++ VI W+ P + + + QL G V+ + G + +A
Sbjct: 161 IQQTVINYWSRPPSAR--NGMETLLQIQLIPTGDVVSVSVLKSSGNS-----AFDRSAIN 213
Query: 242 AVIKSQAFR----LSPSTYKS-WRNITLFFVPSKM 271
AV K+ +F L ++ +R L F P +
Sbjct: 214 AVEKAGSFPELQKLPNREFEKTFRRFRLLFRPEDL 248
>gi|121595946|ref|YP_987842.1| TonB family protein [Acidovorax sp. JS42]
gi|120608026|gb|ABM43766.1| TonB family protein [Acidovorax sp. JS42]
Length = 304
Score = 56.4 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 29/227 (12%), Positives = 61/227 (26%), Gaps = 5/227 (2%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
L+ L +S+ +H L + + + V L V + + +
Sbjct: 31 LQIALGVSIAVHAALLTVRFVDPESFNRVFQDTP--LEVILVNAQSNERPDKAQAIAQAS 88
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
G + + A + A L +P
Sbjct: 89 LAGGGEAAKGRATSPLPYSALTTIGDDLEEAQRKMDQMLEQQTQMLAQLRKQLAVLPEPD 148
Query: 123 YDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIV 182
K S + +++ + I+ + + + + ++R+ +
Sbjct: 149 PRKPSQSTDSQAQEEKRRQLVKLLAEIEKRINEENARPRKRYISPATREE-VYAVYYDAL 207
Query: 183 RNRVIANWNIPSDFKRFKKL--RVKMHFQLNQKGFVLGKINVDVVGG 227
R +V + KKL + M +N G VL V G
Sbjct: 208 RRKVEDKGTQNFPEQGGKKLYGELIMILTVNHDGRVLATEVVQGSGN 254
>gi|297539795|ref|YP_003675564.1| TonB family protein [Methylotenera sp. 301]
gi|297259142|gb|ADI30987.1| TonB family protein [Methylotenera sp. 301]
Length = 318
Score = 56.4 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 26/289 (8%), Positives = 77/289 (26%), Gaps = 42/289 (14%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
+ + IS+++H + L + F +L + L V + + +
Sbjct: 15 MAMAIWISILVHAVILSIH---FEPELKKFKDKLPTLEVMLVNAKTLTKPDKADVLAQAD 71
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
+G + + + S + + ++K + +
Sbjct: 72 LDRGGNTDQNRKMKSALPAIKQQKSEFTLKPMAEVKSGKKAAKMTAEETKEQKHVADLEK 131
Query: 123 YDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRK----------- 171
++ +++ + + + + + + L+ + ++
Sbjct: 132 QAQELMTQLQSTNKIESAPVQKAAAKEADMGNQENPNKKLNMSDLTAAALEMDRLEALIA 191
Query: 172 --------------------RIPSQDAIAIVRNRVIA--NWNIPSDFKRFKKL-RVKMHF 208
+ + R +V N N P K K ++++
Sbjct: 192 KQQDDYQKRPKRKFIGARAQKYRDALYVESWRQKVEKVGNLNYPEAAKNLKMYGQLQLTV 251
Query: 209 QLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPSTYK 257
+ G + G ++L E A+ V + + P
Sbjct: 252 SIKADGSIESIEINRSSG-----HKVLDEAAKHIVELAAPYSRFPDDMH 295
>gi|161619602|ref|YP_001593489.1| TonB family protein [Brucella canis ATCC 23365]
gi|254703452|ref|ZP_05165280.1| TonB family protein [Brucella suis bv. 3 str. 686]
gi|260568760|ref|ZP_05839228.1| TonB-dependent receptor [Brucella suis bv. 4 str. 40]
gi|261754082|ref|ZP_05997791.1| TonB-dependent receptor [Brucella suis bv. 3 str. 686]
gi|161336413|gb|ABX62718.1| TonB family C-terminal domain [Brucella canis ATCC 23365]
gi|260154144|gb|EEW89226.1| TonB-dependent receptor [Brucella suis bv. 4 str. 40]
gi|261743835|gb|EEY31761.1| TonB-dependent receptor [Brucella suis bv. 3 str. 686]
Length = 308
Score = 56.4 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 25/224 (11%), Positives = 58/224 (25%), Gaps = 2/224 (0%)
Query: 18 LLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFS 77
+ + L+ P R V + + E + + +
Sbjct: 62 VAAMVVELVPDLVAPAEERVSEEVQPETTTEQPEEVQPEPEPEPQPEAKAEPQQVQEPEE 121
Query: 78 VQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQD 137
V + E + + +A + ++ K K K K+ +
Sbjct: 122 VIPDVVEAQKPEVAVPLPVEKPQEKPEEKPKAEPKPEPKKVEKLKPQKPKPEKVKPKKAE 181
Query: 138 LQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFK 197
+ + E S+ + + +++ + N
Sbjct: 182 KAAETREASAPRVDADNGAKVAA-SKRGETSASAGVIWAKWTSRLQSHMARNARFLQGKS 240
Query: 198 RFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARK 241
R + + F ++ G VL G + + L E AR+
Sbjct: 241 RNTRGEAHVAFVIDPSGNVLSARIAVSSGDPAVDQLAL-EAARR 283
>gi|39936339|ref|NP_948615.1| tonB protein [Rhodopseudomonas palustris CGA009]
gi|39650194|emb|CAE28717.1| possible tonB protein [Rhodopseudomonas palustris CGA009]
Length = 282
Score = 56.4 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 23/238 (9%), Positives = 53/238 (22%), Gaps = 8/238 (3%)
Query: 13 LHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKG-SSQEN 71
H + + V S + VD + + I Q
Sbjct: 30 AHAGAVAWMLLPDPVVPAED-SAPAAIMVDMAAVPEAIVTARTDISPDQKSADDSRPQAE 88
Query: 72 LVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKA 131
++ Q + +T+ + + K
Sbjct: 89 QRQEPPPQLAEPPVEPNETAPVEQTKTEDRPPVVETAEVPLPRPEPPRAVTPPEPKPPPK 148
Query: 132 TNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWN 191
+ Q + + + + + D + + + +
Sbjct: 149 KKQRSRPQRAAANSQAMRQAQLEARQSDRIAAAQTAFGGASQSPADWRSRLMAHLQRSKR 208
Query: 192 IPSDFKRFKKLRVK-MHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQA 248
S + R+ +HF ++Q G V V G + A V ++
Sbjct: 209 SVSAAADQGRRRIAYVHFAIDQSGNVRSVRLVRSSG-----FAEIDREALALVQRASP 261
>gi|302038651|ref|YP_003798973.1| putative protein TolA [Candidatus Nitrospira defluvii]
gi|300606715|emb|CBK43048.1| putative Protein TolA [Candidatus Nitrospira defluvii]
Length = 411
Score = 56.4 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 33/227 (14%), Positives = 66/227 (29%), Gaps = 10/227 (4%)
Query: 45 YNEDYHSSKYKKIEEPVVQFKGSSQ----ENLVRDFSVQENGDRFSDQTKTHATENETKR 100
D K ++++ G + + +++ +V E + T
Sbjct: 183 QYGDLAPMKPAEVKKSAQPKVGGPERSDLDAMLKKLNVPEMAAAQPAPPQEPPKPAVTPT 242
Query: 101 SSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKE 160
+S E+ + + KAT ++++ + + V
Sbjct: 243 KRASLSEEMNNDLDRELQDLKKLPSLPPVKATEPVREVKPMFREPQPVASAPPVTASVPR 302
Query: 161 LLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKI 220
+ S +A V+ R+ W P K L V + F+L + G V I
Sbjct: 303 SKPETRLRVAGMPGSNQYLARVQARISGFWAAPPVDISGKALTVTVRFRLERDGRVGSVI 362
Query: 221 NVDVVGGTELVRRMLRENARKAVIKSQAFRL-SPSTYKSWRNITLFF 266
G A++AV + P S+ + F
Sbjct: 363 IEQSSGND-----YYDMAAQRAVQSAIPLPPFPPDLTDSYFDAHFTF 404
Score = 38.3 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 19/177 (10%), Positives = 53/177 (29%), Gaps = 2/177 (1%)
Query: 2 RLENGLAISMILHV-MFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP 60
RL + +S++LH+ + +++ F + P+S E+ V E K +K+E+
Sbjct: 25 RLRKTVVVSLVLHLCLLSVIMGAKFFKKTERPLSAVEVSLVTLPPVEAKPEPKVEKVEKA 84
Query: 61 VVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPV 120
V ++ + + + A +
Sbjct: 85 VPHSTPKPVQSAPIPVPPKPVQAPTPPPIPPPVQAAPVAKPAPPAPAPAPAPRLQAPVLA 144
Query: 121 SPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQD 177
+P + + + + + + + + + P+ + + S
Sbjct: 145 APQPIPQ-AAKSPSSAPVTNRADVLRDVMKDIELPPNAPQYGDLAPMKPAEVKKSAQ 200
>gi|148825470|ref|YP_001290223.1| TonB [Haemophilus influenzae PittEE]
gi|148715630|gb|ABQ97840.1| thioredoxin-dependent thiol peroxidase [Haemophilus influenzae
PittEE]
Length = 263
Score = 56.4 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 32/260 (12%), Positives = 87/260 (33%), Gaps = 18/260 (6%)
Query: 12 ILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQEN 71
I+H + + + +N+N S ++ + S + ++ V++ EN
Sbjct: 16 IVHGIVIGFILWNWNK---------PSDSANSAQGDISTSISMELLQGMVLEEPAPEPEN 66
Query: 72 LVRDFSVQENGDRFSDQTKTHAT---ENETKRSSSSKGEQALKESALLRMPVSPYDKQKI 128
+ ++ + + + T E + + + + ++ + +
Sbjct: 67 VQKEPEPEPEPEPEKQEIVEDPTIKPEPKKIKEPEKEKPKPKEKPKEKPKNKPKKEVKPQ 126
Query: 129 SKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIA 188
K NK+ + +++ ++V S + +R + +
Sbjct: 127 QKPINKDLPKGDKNIDSSANVNDKASTTSAANSNAQVAGSGTDTSEIAAYRSAIRREIES 186
Query: 189 NWNIPSDFKR-FKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQ 247
+ P+ K K+ +V + F + G + G G L + A A+ S+
Sbjct: 187 HKRYPTRAKIMRKQGKVSVSFNVGADGSLSGARVTKSSGD-----ESLDKAALDAINVSR 241
Query: 248 AFRLSPSTYKSWRNITLFFV 267
+ P+ + S ++ + F
Sbjct: 242 SVGARPAGFPSSLSVQISFT 261
>gi|218256897|ref|ZP_03474386.1| hypothetical protein PRABACTJOHN_00038 [Parabacteroides johnsonii
DSM 18315]
gi|218225895|gb|EEC98545.1| hypothetical protein PRABACTJOHN_00038 [Parabacteroides johnsonii
DSM 18315]
Length = 284
Score = 56.4 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 30/262 (11%), Positives = 80/262 (30%), Gaps = 20/262 (7%)
Query: 1 MRLEN----GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKY-- 54
M+L G+A S+ H+ LL+L F ++ +++ N+
Sbjct: 1 MKLNKDDIYGIAGSVAFHLFILLILGFTVLRTVVPDEDGGILVNFGNVNAAAGTFEPKYT 60
Query: 55 ------------KKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSS 102
+ +P V+ + SV + + + + E K+
Sbjct: 61 GQEPPEETTTPPPPVPQPKVETPKEELITQDMEESVAIEEAKKKKEKEELRKKEEEKKRK 120
Query: 103 SSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELL 162
++ +++ + ++ ++K +NK G+ E S +
Sbjct: 121 EEAEKERIRKEEAEKKRLAEERRKKEQAISNKVAGAFGMGSQEGNSQGDAESGTGNQGSP 180
Query: 163 SKVEKSSRKRIPSQ-DAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKIN 221
+ + + + ++ R+ ++ ++ KG V+
Sbjct: 181 FGNSDHGANEGVGGYGSFNLNGRSIGRGGLPRPAYTIQEEGRIVINITVDPKGNVIFAEI 240
Query: 222 VDVVG-GTELVRRMLRENARKA 242
+R+ + A++A
Sbjct: 241 GKGTNIDNGSMRKSALDAAKRA 262
>gi|256828399|ref|YP_003157127.1| TonB family protein [Desulfomicrobium baculatum DSM 4028]
gi|256577575|gb|ACU88711.1| TonB family protein [Desulfomicrobium baculatum DSM 4028]
Length = 324
Score = 56.4 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 41/320 (12%), Positives = 85/320 (26%), Gaps = 68/320 (21%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
S++LH++ LL + + + M VD + + K + +
Sbjct: 9 SWVFSIVLHLVVLLGGAYVSTDTHIKLNLNKRMYEVDLVGPPNKGKPGAKSARKKAPEVA 68
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSK-------------------- 105
+ Q+ +D + D K A K S
Sbjct: 69 EAPQKPEAKDAKTVKAPDEPKKPEKKAAPSETAKAIPSDTVNATKVAEAKPEEPKKPEPK 128
Query: 106 ---------GEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRP 156
++ K++A P ++K +K Q L + K S +
Sbjct: 129 KEEPKKEEPKKEEPKKTAKEEPKSEPKAEKKPTKEEILAQALGEATKVAKSSTKSGADGA 188
Query: 157 DKKELLSKVEKSSRKR------------------------------IPSQDAIAIVRNRV 186
K S + + Q V +
Sbjct: 189 AKGTATSGSKDALADALADLGREVSGRGTRGDGTAEDGDGEGVSSGSLDQYYATQVIRAI 248
Query: 187 IANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKS 246
NW P L + ++N+ G +L ++ G ++ + +A+ +
Sbjct: 249 RQNWRFPRLSNVV--LATTVELKVNKAGDILSSRMLNGSGRSD-----FDASVMRAIEDT 301
Query: 247 QAFRLSPSTYKSWRNITLFF 266
+ P T + + + F
Sbjct: 302 KKLPPLPETLDA--TLAITF 319
>gi|160883177|ref|ZP_02064180.1| hypothetical protein BACOVA_01146 [Bacteroides ovatus ATCC 8483]
gi|156111402|gb|EDO13147.1| hypothetical protein BACOVA_01146 [Bacteroides ovatus ATCC 8483]
Length = 291
Score = 56.4 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 25/250 (10%), Positives = 62/250 (24%), Gaps = 23/250 (9%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVP-------------------ISRREMLSVDNIYN 46
G ++++HV + LL + + P ++ VD +
Sbjct: 11 GALGALLVHVAVIALLIL-VSFTVPQPDEDAGGVPVMLGNVDTASGFDDPSLVDVDIMDE 69
Query: 47 EDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKG 106
+ + + P Q + E + + + + K
Sbjct: 70 DAAAPPAETEPQLPSEQDLLTQTEEETVTLKPKTEEPKKETVKPKEVVKPKEPVKKPEKT 129
Query: 107 EQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVE 166
E A ++K ++ +++ + + + SK
Sbjct: 130 EAEKAAEAKRLAEEKAERERKAAEEAARKRVSGAFGKGAQMTGNKGTAASGTGTEGSKEG 189
Query: 167 KSSRKRIPSQD---AIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVD 223
SS + + + ++ RV ++ +N G V+
Sbjct: 190 NSSTGAKTGTGGYGTFDLGGRSLGTGSLPKPAYNVQEEGRVVVNITVNPAGQVVSTSISP 249
Query: 224 VVGGTELVRR 233
R
Sbjct: 250 QTNTVNSALR 259
>gi|77460624|ref|YP_350131.1| TonB-like [Pseudomonas fluorescens Pf0-1]
gi|77384627|gb|ABA76140.1| Cell division and transport-associated protein TolA [Pseudomonas
fluorescens Pf0-1]
Length = 359
Score = 56.4 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 20/132 (15%), Positives = 37/132 (28%), Gaps = 11/132 (8%)
Query: 144 AEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLR 203
AE K + + + + ++R R W P + K +
Sbjct: 233 AEDKKAQALADLLSDTPQRQQALADEQGDEVAGSFDDLIRARAAEGWARPPSAR--KGMT 290
Query: 204 VKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFR----LSPSTYKSW 259
V + + G V G +A AV + PS + +
Sbjct: 291 VVLQIGMLPDGTVTSVSVAKSSGDG-----PFDASAVAAVKNIGRLTEMQGMKPSDFAPY 345
Query: 260 RNITLFFVPSKM 271
R+ + F P +
Sbjct: 346 RSFKMTFTPEDL 357
>gi|254000282|ref|YP_003052345.1| TonB family protein [Methylovorus sp. SIP3-4]
gi|253986961|gb|ACT51818.1| TonB family protein [Methylovorus sp. SIP3-4]
Length = 314
Score = 56.4 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 32/287 (11%), Positives = 78/287 (27%), Gaps = 41/287 (14%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
L L +S +LH+ + L F ++ + + V + + +
Sbjct: 8 LGVTLLVSAVLHIAIIASLDFKAPDLQVLK-DKMSSMDVVLVNTKTESKPEKADALAQAN 66
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
+G + + R S D+ QT + + + + E ++
Sbjct: 67 LNRGGNTDADRRMKSALPPPDQPPKQTTPKPEAQSRQSAMQASSTTSEAERRQQKVAELE 126
Query: 123 YDKQKI--------SKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIP 174
Q++ T+ Q+ + + + L S ++ + +
Sbjct: 127 KQVQELMHQLQSTNKVETHPAQEAAAVKPETGEQSASSKSLKAADLLASSLDMARLEAQI 186
Query: 175 SQD------------------------AIAIVRNRVIANWNIPSDFKRFKK---LRVKMH 207
++ + R +V ++ K ++ M
Sbjct: 187 AKQQDEYQKRPKRKFIGARAQEYRFAAYVDNWRQKVEKVGSLNYPEAAKDKKLYGKLTMT 246
Query: 208 FQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPS 254
+ G + G + L + AR+ V + F P
Sbjct: 247 VSIRADGSLDKIEINQSSG-----YKELDDGARRIVELAAPFAPFPE 288
>gi|332306757|ref|YP_004434608.1| TonB family protein [Glaciecola agarilytica 4H-3-7+YE-5]
gi|332174086|gb|AEE23340.1| TonB family protein [Glaciecola agarilytica 4H-3-7+YE-5]
Length = 331
Score = 56.4 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 23/193 (11%), Positives = 58/193 (30%), Gaps = 6/193 (3%)
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
Q + + V + + + +N ++ K + ++ P
Sbjct: 119 QPEPEPKVEPVVEEVAPVAESIAVPVVEQASAQNAIQKVEELKEPKEQLPEPEVKEPTPT 178
Query: 123 YDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIV 182
+ + + + + +S + ++D A +
Sbjct: 179 QPPPEQQDVAVSNDAAEKAQSDDSAPAPAAQKATTRGTGSASSNRSGGRAGNAKDFFAEL 238
Query: 183 RNRVIANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARK 241
+ + P + K+ K + V++ F ++ G+VL + G E L + A
Sbjct: 239 QAHLRKYKTYPRELKKQKIEGVVQLQFTIDHDGYVLASSIKESSGSAE-----LDKAALD 293
Query: 242 AVIKSQAFRLSPS 254
+ K+ L P
Sbjct: 294 MLQKANPLPLVPD 306
>gi|220915812|ref|YP_002491116.1| TonB family protein [Anaeromyxobacter dehalogenans 2CP-1]
gi|219953666|gb|ACL64050.1| TonB family protein [Anaeromyxobacter dehalogenans 2CP-1]
Length = 256
Score = 56.4 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 17/255 (6%), Positives = 54/255 (21%), Gaps = 32/255 (12%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPV 61
R+ + S+++H + + K I +
Sbjct: 14 RMWPAVLASLMVHAGLITWALVR--------------------QQGPAIDLEQKPIVAKL 53
Query: 62 VQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVS 121
V+ E + + + P
Sbjct: 54 VRLGEKRPEQWLPRKETPPEPAAAEPMPAVATAPAAPTPAPPAPAAPVPGSKPSPVPPAP 113
Query: 122 PYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAI 181
+ + + K+ ++ + + + +A+
Sbjct: 114 RPPARTGPTTAGSSTSVASMLSRVKQQVERERWGDPEG----DPAGDASEAGEGDRYLAL 169
Query: 182 VRNRVIANWNIPSDFKRFKKL--RVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENA 239
V+ + N+ +P+ ++ + + + G + G +
Sbjct: 170 VKRALQENYRVPATISERDRMYLKGTVVLWIEPDGNIARWRIEKSSGNG-----AFDDAL 224
Query: 240 RKAVIKSQAFRLSPS 254
+ V + P
Sbjct: 225 ERTVRQ-TRLPPPPD 238
>gi|169632396|ref|YP_001706132.1| hypothetical protein ABSDF0474 [Acinetobacter baumannii SDF]
gi|169151188|emb|CAO99863.1| conserved hypothetical protein; putative tonB-domain [Acinetobacter
baumannii]
Length = 290
Score = 56.1 bits (133), Expect = 5e-06, Method: Composition-based stats.
Identities = 25/237 (10%), Positives = 81/237 (34%), Gaps = 9/237 (3%)
Query: 16 MFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRD 75
+F+LL++F ++ +S+ + H+ + ++ ++
Sbjct: 44 IFVLLIHFAMPAPSEQ-STKEIAISIRPTEDVIKHADFLAQADQQGSGAFRAAHRMSSNS 102
Query: 76 FSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKE 135
+ + + + + + +R + + + + + K+ + + ++
Sbjct: 103 PAPRPSDASTGEAQLETLEKVQQQRELKFEEKVLMTVLSWQKQAEESQRKKALEQLQSQF 162
Query: 136 QDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSD 195
Q + + + +++ + V+ K+ S + R +V N
Sbjct: 163 QAKAAMVASLEAQYLQRQQDFSRQQKIKTVDGIQAKKDASAAYLDKFREKVELYGNRYYP 222
Query: 196 FKRFKK---LRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAF 249
+ ++ V++ LN +G + ++ G +L E A+ +V + F
Sbjct: 223 EEAKQQQLKGEVRLMVILNAQGGIRAIRLLESSG-----HPVLDEAAKASVRRGAPF 274
>gi|184159548|ref|YP_001847887.1| periplasmic protein TonB [Acinetobacter baumannii ACICU]
gi|183211142|gb|ACC58540.1| Periplasmic protein TonB [Acinetobacter baumannii ACICU]
gi|322509458|gb|ADX04912.1| TonB-like protein [Acinetobacter baumannii 1656-2]
gi|323519479|gb|ADX93860.1| periplasmic protein TonB [Acinetobacter baumannii TCDC-AB0715]
Length = 294
Score = 56.1 bits (133), Expect = 5e-06, Method: Composition-based stats.
Identities = 28/262 (10%), Positives = 86/262 (32%), Gaps = 13/262 (4%)
Query: 16 MFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRD 75
+F+LL++F ++ +S+ + H+ + ++ +
Sbjct: 33 IFVLLIHFAMPAPSEQ-STKEIAISIRPTEDVIKHADFLAQADQQGSGAFREAHRMSSNS 91
Query: 76 FSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKE 135
+ + + + + +R + + + + + K+ + + ++
Sbjct: 92 PAPMPSDASTGEAQLETLEKVQQQRELKFEEKVLMTVLSWQKQAEESQRKKALEQLQSQF 151
Query: 136 QDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSD 195
Q + + + +++ + V+ K+ S + R +V N
Sbjct: 152 QAKAAMVASLEAQYLQRQQDFSRQQKIKTVDGIQAKKDASAAYLDKFREKVELYGNRYYP 211
Query: 196 FKRFKK---LRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLS 252
+ ++ V++ LN +G + ++ G +L E A+ +V + F
Sbjct: 212 EEAKQQQLKGEVRLMVILNAQGGIRAIRLLESSG-----HPVLDEAAKASVRRGAPFGRF 266
Query: 253 PSTYKSWRNITLF----FVPSK 270
K + + F P++
Sbjct: 267 DVNMKDISELRIIRTWRFDPAE 288
>gi|285019184|ref|YP_003376895.1| biopolymer transport protein [Xanthomonas albilineans GPE PC73]
gi|283474402|emb|CBA16903.1| probable biopolymer transport protein [Xanthomonas albilineans]
Length = 333
Score = 56.1 bits (133), Expect = 5e-06, Method: Composition-based stats.
Identities = 24/218 (11%), Positives = 58/218 (26%), Gaps = 19/218 (8%)
Query: 61 VVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATE---NETKRSSSSKGEQALKESALLR 117
+ QE R QE + + + + ++ + + ++ + R
Sbjct: 126 IPVPDKVDQERATRAAISQEKEKQEQEAKRRQEQIDLTEQKRQQEAEQKQRLAAQQEEQR 185
Query: 118 MPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQD 177
+++ K + Q Q ++
Sbjct: 186 QQKIAEIRKQREKLDREAQLTQQKLRQIADLSAKQAAAAATNTPQEAPGQNGNNTDLQAK 245
Query: 178 AIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRE 237
A ++ V++ W P + + K+ + G V+ R
Sbjct: 246 YAAAIQQAVLSQWVRPDSVPLGQ--KCKIAIRQIVGGQVIEAKV----SPDCPYDEAGRR 299
Query: 238 NARKAVIKSQAFRLSPSTYKSW-----RNITLFFVPSK 270
+ AV+++Q Y + R++T F
Sbjct: 300 SIEAAVLRAQPLP-----YHGFESVFTRDLTFNFTAQD 332
>gi|221065151|ref|ZP_03541256.1| TonB family protein [Comamonas testosteroni KF-1]
gi|220710174|gb|EED65542.1| TonB family protein [Comamonas testosteroni KF-1]
Length = 286
Score = 56.1 bits (133), Expect = 5e-06, Method: Composition-based stats.
Identities = 40/254 (15%), Positives = 78/254 (30%), Gaps = 20/254 (7%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
L+ L +S+ +H + L + + + V L V + +
Sbjct: 13 LQLALGVSIAVHAVLLTIRFVDPESFERVFQDTP--LEVILVNARANEVPDKAQAIAQTS 70
Query: 63 QFKGSSQEN-----LVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLR 117
G + + ++ GD F ++ + E + ++ Q + +
Sbjct: 71 LAGGGDADQGRATSPMPYSALTAVGDDFEEKQRQLDAMQEQQHQLLTQLRQQVAALPPID 130
Query: 118 MPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQD 177
+S +K + K L + +K I+ RP K+ + + K
Sbjct: 131 PRLSADNKA-LEAQEEKRLQLIKLLAEIEKRINEENARPKKRYIS-----PATKEAVYAV 184
Query: 178 AIAIVRNRVIANWNIPSDFKRFKKL--RVKMHFQLNQKGFVLGKINVDVVGGTELVRRML 235
+R +V + KKL + M +N G VL V G RML
Sbjct: 185 YYDALRRKVEDKGTENFPENKGKKLYGELVMILTVNHDGRVLSTEVVQGSGN-----RML 239
Query: 236 RENARKAVIKSQAF 249
A + +
Sbjct: 240 DTRAEAIARAAGPY 253
>gi|145635158|ref|ZP_01790863.1| TonB [Haemophilus influenzae PittAA]
gi|145267579|gb|EDK07578.1| TonB [Haemophilus influenzae PittAA]
Length = 261
Score = 56.1 bits (133), Expect = 5e-06, Method: Composition-based stats.
Identities = 34/257 (13%), Positives = 79/257 (30%), Gaps = 14/257 (5%)
Query: 12 ILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQEN 71
I+H + + + +N+N P D + + +EEP + + +E
Sbjct: 16 IVHGIVIGFILWNWN----KPSDSANSAQGDISTSISMELLQGMVLEEPAPEPENVQKEP 71
Query: 72 LVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKA 131
++ E ++ E+ ++ ++ I+K
Sbjct: 72 EPEPEPEKQEIVEDPTIKPEPKKIKEPEKEKPKPKEKPKEKPKNKPKKEVKPQQKPINKD 131
Query: 132 TNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWN 191
K S T ++ +S + +R + ++
Sbjct: 132 LPKGDKNIDSSANVNDKASTTSAANSNAQVAGSGTDTSEIAA----YRSAIRREIESHKR 187
Query: 192 IPSDFKR-FKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFR 250
P+ K K+ +V + F + G + G G L + A A+ S++
Sbjct: 188 YPTRAKIMRKQGKVSVSFNVGADGSLSGAKVTKSSGD-----ESLDKAALDAINVSRSVG 242
Query: 251 LSPSTYKSWRNITLFFV 267
P+ + S ++ + F
Sbjct: 243 TRPAGFPSSLSVQISFT 259
>gi|254714533|ref|ZP_05176344.1| TonB family protein [Brucella ceti M644/93/1]
gi|254717431|ref|ZP_05179242.1| TonB family protein [Brucella ceti M13/05/1]
gi|261219263|ref|ZP_05933544.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|261322324|ref|ZP_05961521.1| TonB-dependent receptor [Brucella ceti M644/93/1]
gi|260924352|gb|EEX90920.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|261295014|gb|EEX98510.1| TonB-dependent receptor [Brucella ceti M644/93/1]
Length = 308
Score = 56.1 bits (133), Expect = 5e-06, Method: Composition-based stats.
Identities = 25/224 (11%), Positives = 58/224 (25%), Gaps = 2/224 (0%)
Query: 18 LLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFS 77
+ + L+ P R V + + E + + +
Sbjct: 62 VAAMVVELVPDLVAPAEERVSEEVQPETTTEQPEEVQPEPEPEPQPEAKAEPQQVQEPEE 121
Query: 78 VQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQD 137
V + E + + +A + ++ K K K K+ +
Sbjct: 122 VIPDVVEAQKPEVAVPLPVEKPQEKPEEKPKAEPKPEPKKVEKLKPQKPKPEKVKPKKAE 181
Query: 138 LQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFK 197
+ + E S+ + + +++ + N
Sbjct: 182 KAAETREASAPRVDADNGAKVAA-SKRGETSASAGVIWAKWTSRLQSHMAQNARFLQGKS 240
Query: 198 RFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARK 241
R + + F ++ G VL G + + L E AR+
Sbjct: 241 RNTRGEAHVAFVIDPSGNVLSARIAVSSGDPAVDQLAL-EAARR 283
>gi|193078438|gb|ABO13429.2| TonB-like protein [Acinetobacter baumannii ATCC 17978]
Length = 294
Score = 56.1 bits (133), Expect = 5e-06, Method: Composition-based stats.
Identities = 28/262 (10%), Positives = 87/262 (33%), Gaps = 13/262 (4%)
Query: 16 MFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRD 75
+F+LL++F ++ +S+ + H+ + ++ ++
Sbjct: 33 IFVLLIHFAMPAPSEQ-STKEIAISIHPTEDVIKHADFLAQADQQGSGAFRAAHRMSSNS 91
Query: 76 FSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKE 135
+ + + + + +R + + + + + K+ + + ++
Sbjct: 92 PAPMPSDASTGEAQLETLEKVQQQRELKFEEKVLMTVLSWQKQAEESQRKKALEQLQSQF 151
Query: 136 QDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSD 195
Q + + + +++ + V+ K+ S + R +V N
Sbjct: 152 QAKAAMVASLEAQYLQRQQDFSRQQKIKTVDGIQAKKDASAAYLDKFREKVELYGNRYYP 211
Query: 196 FKRFKK---LRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLS 252
+ ++ V++ LN +G + ++ G +L E A+ +V + F
Sbjct: 212 EEAKQQQLKGEVRLMVILNAQGGIRAIRLLESSG-----HPVLDEAAKASVRRGAPFGRF 266
Query: 253 PSTYKSWRNITLF----FVPSK 270
K + + F P++
Sbjct: 267 DVNMKDISELRIIRTWRFDPAE 288
>gi|299148210|ref|ZP_07041272.1| putative TonB exported protein [Bacteroides sp. 3_1_23]
gi|298512971|gb|EFI36858.1| putative TonB exported protein [Bacteroides sp. 3_1_23]
Length = 291
Score = 56.1 bits (133), Expect = 6e-06, Method: Composition-based stats.
Identities = 25/250 (10%), Positives = 62/250 (24%), Gaps = 23/250 (9%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVP-------------------ISRREMLSVDNIYN 46
G ++++HV + LL + + P ++ VD +
Sbjct: 11 GALGALLVHVAVIALLIL-VSFTVPQPDEDADGVPVMMGNVDTASGFDDPSLVDVDIMDE 69
Query: 47 EDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKG 106
+ + + P Q + E + + + + K
Sbjct: 70 DAAAPPAETEPQLPSEQDLLTQTEEETVTLKPKTEEPKKETVKPKEVVKPKEPVKKPEKT 129
Query: 107 EQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVE 166
E A ++K ++ +++ + + + SK
Sbjct: 130 EAEKAAEAKRLAEEKAERERKAAEEAARKRVSGAFGKGAQMTGNKGTAASGTGTEGSKEG 189
Query: 167 KSSRKRIPSQD---AIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVD 223
SS + + + ++ RV ++ +N G V+
Sbjct: 190 NSSTGAKTGTGGYGTFDLGGRSLGTGSLPKPAYNVQEEGRVVVNITVNPAGQVVSTSISP 249
Query: 224 VVGGTELVRR 233
R
Sbjct: 250 QTNTVNSALR 259
>gi|197121111|ref|YP_002133062.1| TonB family protein [Anaeromyxobacter sp. K]
gi|196170960|gb|ACG71933.1| TonB family protein [Anaeromyxobacter sp. K]
Length = 256
Score = 56.1 bits (133), Expect = 6e-06, Method: Composition-based stats.
Identities = 17/255 (6%), Positives = 54/255 (21%), Gaps = 32/255 (12%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPV 61
R+ + S+++H + + K I +
Sbjct: 14 RMWPAVLASLMVHAGLITWALVR--------------------QQGPAIDLEQKPIVAKL 53
Query: 62 VQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVS 121
V+ E + + + P
Sbjct: 54 VRLGEKRPEQWLPRKETPPEPAAAEPMPAVATAPAAPTPAPPAPAAPVPGAKPSPVPPAP 113
Query: 122 PYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAI 181
+ + + K+ ++ + + + +A+
Sbjct: 114 RPPARTGPTTAGSSTSVASMLSRVKQQVERERWGDPEG----DPAGDASEAGEGDRYLAL 169
Query: 182 VRNRVIANWNIPSDFKRFKKL--RVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENA 239
V+ + N+ +P+ ++ + + + G + G +
Sbjct: 170 VKRALQENYRVPATISERDRMYLKGTVVLWIEPDGNIARWRIEKSSGNG-----AFDDAL 224
Query: 240 RKAVIKSQAFRLSPS 254
+ V + P
Sbjct: 225 ERTVRQ-TRLPPPPD 238
>gi|109899247|ref|YP_662502.1| hypothetical protein Patl_2940 [Pseudoalteromonas atlantica T6c]
gi|109701528|gb|ABG41448.1| Cell division and transport-associated protein TolA
[Pseudoalteromonas atlantica T6c]
Length = 298
Score = 56.1 bits (133), Expect = 6e-06, Method: Composition-based stats.
Identities = 43/304 (14%), Positives = 101/304 (33%), Gaps = 46/304 (15%)
Query: 1 MRLENGLAISMILHVMFLLLLYFNFNVQLLVPI-------SRREMLSVDNIYNEDYHSSK 53
++L L S+ LH++F +LL+ +V+L E ++VD +D
Sbjct: 3 LKLSLPLIKSLSLHLVFGVLLFAGMDVKLPQETLEMASSQPVIEAVAVDANAVDDQIKRI 62
Query: 54 YKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQA---- 109
+ + + E R + + + + +R + EQA
Sbjct: 63 EDQKKRKQKVEEDRIAELERRANEAERKRKQQEQEAVEIEQRTKRQREERKQAEQAAIAA 122
Query: 110 -----------------------LKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEK 146
++ A R + ++K KA + Q + + +
Sbjct: 123 RKKQEREKAKAKAAEAERKRKELERKKAEERARKAKEAREKEEKALKEAQRKKAEAAEKA 182
Query: 147 KSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKM 206
+ + + + ++ + + +S + Q A++ + + + + ++
Sbjct: 183 RQERALQDQLEAEQAVRQQRRSKQVLTEVQKYQALIHQAIQRQLIVDNSMRGK---SCQL 239
Query: 207 HFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLS--PSTYKSWRNITL 264
+ +L G V+ + +L A+ AV K+ +S Y+ R+I L
Sbjct: 240 NIRLASSGLVIQVKEL-------GGDPILCRAAKSAVFKAGTLPVSKEADVYEKLRDINL 292
Query: 265 FFVP 268
P
Sbjct: 293 TVEP 296
>gi|13473206|ref|NP_104773.1| hypothetical protein mll3729 [Mesorhizobium loti MAFF303099]
gi|14023954|dbj|BAB50559.1| mll3729 [Mesorhizobium loti MAFF303099]
Length = 123
Score = 56.1 bits (133), Expect = 6e-06, Method: Composition-based stats.
Identities = 16/87 (18%), Positives = 30/87 (34%), Gaps = 5/87 (5%)
Query: 170 RKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVG--G 227
+ + + V + + A W P+ V + F + G ++G G
Sbjct: 21 PSQAAVLNTMDDVGDAIQACWTPPA---DAGNSTVTLSFSFKRDGSLIGPPRPTAAKVAG 77
Query: 228 TELVRRMLRENARKAVIKSQAFRLSPS 254
+ R+ + A AV LSP+
Sbjct: 78 DDKARKAYIDAAIAAVKNCTPLSLSPA 104
>gi|260171934|ref|ZP_05758346.1| hypothetical protein BacD2_08715 [Bacteroides sp. D2]
gi|315920246|ref|ZP_07916486.1| conserved hypothetical protein [Bacteroides sp. D2]
gi|313694121|gb|EFS30956.1| conserved hypothetical protein [Bacteroides sp. D2]
Length = 291
Score = 56.1 bits (133), Expect = 6e-06, Method: Composition-based stats.
Identities = 25/250 (10%), Positives = 62/250 (24%), Gaps = 23/250 (9%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVP-------------------ISRREMLSVDNIYN 46
G ++++HV + LL + + P ++ VD +
Sbjct: 11 GALGALLVHVAVIALLIL-VSFTVPQPDEDAGGVPVMLGNVDTASGFDDPSLVDVDIMDE 69
Query: 47 EDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKG 106
+ + + P Q + E + + + + K
Sbjct: 70 DAAAPPAETEPQLPSEQDLLTQTEEETVTLKPKTEEPKKETVKPKEVVKPKEPVKKPEKT 129
Query: 107 EQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVE 166
E A ++K ++ +++ + + + SK
Sbjct: 130 EAEKAAEAKRLAEEKAERERKAAEEAARKRVSGAFGKGAQMTGNKGTAASGTGTEGSKEG 189
Query: 167 KSSRKRIPSQD---AIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVD 223
SS + + + ++ RV ++ +N G V+
Sbjct: 190 NSSTGAKTGTGGYGTFDLGGRSLGTGSLPKPVYNVQEEGRVVVNITVNPAGQVISTSISP 249
Query: 224 VVGGTELVRR 233
R
Sbjct: 250 QTNTVNSALR 259
>gi|225628240|ref|ZP_03786274.1| TonB family C-terminal domain-containing protein [Brucella ceti
str. Cudo]
gi|260167888|ref|ZP_05754699.1| TonB family protein [Brucella sp. F5/99]
gi|261757327|ref|ZP_06001036.1| TonB-dependent receptor [Brucella sp. F5/99]
gi|225616086|gb|EEH13134.1| TonB family C-terminal domain-containing protein [Brucella ceti
str. Cudo]
gi|261737311|gb|EEY25307.1| TonB-dependent receptor [Brucella sp. F5/99]
Length = 308
Score = 55.7 bits (132), Expect = 6e-06, Method: Composition-based stats.
Identities = 25/224 (11%), Positives = 58/224 (25%), Gaps = 2/224 (0%)
Query: 18 LLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFS 77
+ + L+ P R V + + E + + +
Sbjct: 62 VAAMVVELVPDLVAPAEERVSEEVQPETTTEQPEEVQPEPEPEPQPEAKAEPQQVQEPEE 121
Query: 78 VQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQD 137
V + E + + +A + ++ K K K K+ +
Sbjct: 122 VIPDVVEAQKPEVAVPLPVEKPQEKPEEKPKAEPKPEPKKVEKLKPQKPKPEKVKPKKAE 181
Query: 138 LQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFK 197
+ + E S+ + + +++ + N
Sbjct: 182 KAAETREASAPRVDADNGAKVAA-SKRGETSASAGVIWAKWTSRLQSHMARNARFLQSKS 240
Query: 198 RFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARK 241
R + + F ++ G VL G + + L E AR+
Sbjct: 241 RNTRGETHVAFVIDPSGNVLSARIAVSSGDPAVDQLAL-EAARR 283
>gi|89091934|ref|ZP_01164889.1| TonB-like [Oceanospirillum sp. MED92]
gi|89083669|gb|EAR62886.1| TonB-like [Oceanospirillum sp. MED92]
Length = 317
Score = 55.7 bits (132), Expect = 6e-06, Method: Composition-based stats.
Identities = 29/288 (10%), Positives = 72/288 (25%), Gaps = 45/288 (15%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPV 61
R L + +H + + + + + + + K
Sbjct: 14 RFGFTLFFATAIHAV----AIIGISFTSEAVKPPLKTIEITLAQFQQEKAPKKADFIAQA 69
Query: 62 VQFKGSSQENLVRDFSVQE------NGDRFSDQTKTHATENETKRSSSSKGEQALKESAL 115
Q + + + Q+ + Q T + + A
Sbjct: 70 NQEGSGESQKKLLPATPQKSSLRDDKVNPQLPQPVVAQTPPSPTPAELPSKPEKTATPAK 129
Query: 116 LRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRP------------------- 156
S + ++ K Q IS K +
Sbjct: 130 QAQAASSKSPKTVATIKPKAQKTADISKKPPKEKTKPQNQDRPTTSLLARSLEIASLQAE 189
Query: 157 --------DKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKK---LRVK 205
K+ + ++ +S ++ + R ++ NI + +K ++
Sbjct: 190 IDSHREMMAKQPRVKRLTSASTQKREDALYLDNWRKKIENVGNINYPEEARRKKMYGSLR 249
Query: 206 MHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSP 253
+ + G V + G +L + A++ V + F+ P
Sbjct: 250 LLVSIYPDGSVKSIEILQSSGK-----PVLDDAAKRIVQLAAPFQPFP 292
>gi|260494266|ref|ZP_05814397.1| ligand gated channel protein TonB [Fusobacterium sp. 3_1_33]
gi|260198412|gb|EEW95928.1| ligand gated channel protein TonB [Fusobacterium sp. 3_1_33]
Length = 262
Score = 55.7 bits (132), Expect = 6e-06, Method: Composition-based stats.
Identities = 34/274 (12%), Positives = 75/274 (27%), Gaps = 19/274 (6%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
++ + IS++LH++ L QL + +++ + + S
Sbjct: 1 MKKYILISLVLHLIILFGFGVMQTTQLEKDEPKNQVVPIAFV--AKQTSENPGSKVLDTE 58
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
+ + S E ++ + ++ E + S+ + E
Sbjct: 59 EREKQSPEPPKPKVEKKQEEKKSEEKKVEKKPEKKEIESNIPSKDAKPVEKQSETTTSEN 118
Query: 123 YDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIV 182
+ + S +S + S S+ +
Sbjct: 119 TQSTESTDKGESTSSDNSSSKGGSTKGTGNGDEGFGSNFISDGDGSYIALS-SKGINYQI 177
Query: 183 RNRVIANW-NIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARK 241
N V ++ + K+++V + F + KG V K
Sbjct: 178 INEVEPDYPSQAESIGYSKQVKVTVKFLVGLKGNVEKADITQSHKDLG-----FDAEVMK 232
Query: 242 AVIKSQAFRLSPSTYKSWRNI------TLFFVPS 269
A+ K + Y + +NI T F P
Sbjct: 233 AIKKWK----FKPIYHNGKNIKVYFVKTFVFDPQ 262
>gi|291286833|ref|YP_003503649.1| TonB family protein [Denitrovibrio acetiphilus DSM 12809]
gi|290883993|gb|ADD67693.1| TonB family protein [Denitrovibrio acetiphilus DSM 12809]
Length = 247
Score = 55.7 bits (132), Expect = 7e-06, Method: Composition-based stats.
Identities = 32/249 (12%), Positives = 68/249 (27%), Gaps = 20/249 (8%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
+ LA S I+H++ L + + + + + + KK + V
Sbjct: 1 MFRSLAESAIIHLLMFATLLWFLPLMGNKEVPAKNEI-ITLSTFIVQKPKPAKKEQTTVK 59
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
+ S V++ Q K + + + K + + +
Sbjct: 60 TIEKSKTLPDKAPAYVKKKPKPLPLQKKAKTVKPQPIPTPVPKPKVPARREMQPTVSAPA 119
Query: 123 YDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIV 182
S+ + + + +K + + +K
Sbjct: 120 TAPMPTSRNEDVITPMHKNVPVKTSPSQQEYEEQARKAYIMQNQKQIFLS---------- 169
Query: 183 RNRVIANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARK 241
+ P +R RV + F + ++G V G +L E A K
Sbjct: 170 ---IKKVLQYPLYARRKGWTGRVIVSFLIEREGSVRNVNVQQSSG-----YDLLDEKAVK 221
Query: 242 AVIKSQAFR 250
AV + F
Sbjct: 222 AVRDAAPFP 230
>gi|89902181|ref|YP_524652.1| TonB-like protein [Rhodoferax ferrireducens T118]
gi|89346918|gb|ABD71121.1| TonB-like [Rhodoferax ferrireducens T118]
Length = 285
Score = 55.7 bits (132), Expect = 7e-06, Method: Composition-based stats.
Identities = 27/249 (10%), Positives = 61/249 (24%), Gaps = 9/249 (3%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
L+ L S+ +H L + + + V L V + +
Sbjct: 9 LQLALGASIAVHAALLTVRFVDPQAFNRVFEDTP--LEVILVNARTQERPDKARAIAQAN 66
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
G E + + T+ + + + + ++L
Sbjct: 67 MAGGGDAERGRATSPLPPALISETGDDTEDQTQRQLQNMQEQQTLLLAQVKSMLAALPPA 126
Query: 123 YDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIV 182
+Q + E++ + + + + + + + +
Sbjct: 127 DPRQASASPERAEREQKRRQLIRLLAEIERRINQENARPKKRYISPATREAVYAIYYDHL 186
Query: 183 RNRVIANWNIPSDFKRFKKL--RVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENAR 240
R + KKL + M +N G +L G R L A
Sbjct: 187 RRAIEDKGTQNFPELAGKKLYGELVMSVTVNFDGQILTTRIEQSSGN-----RTLDRRAE 241
Query: 241 KAVIKSQAF 249
+ F
Sbjct: 242 AITRSAAPF 250
>gi|94987135|ref|YP_595068.1| colicin uptake membrane protein [Lawsonia intracellularis
PHE/MN1-00]
gi|94731384|emb|CAJ54747.1| membrane protein involved in colicin uptake [Lawsonia
intracellularis PHE/MN1-00]
Length = 317
Score = 55.7 bits (132), Expect = 7e-06, Method: Composition-based stats.
Identities = 31/261 (11%), Positives = 76/261 (29%), Gaps = 31/261 (11%)
Query: 29 LLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGS--SQENLVRDFSVQENGDRFS 86
+ + ++NI S + P+ Q +N ++ +V +
Sbjct: 61 PTKTSTVTPSIPIENIPVLKNPSVQTSSDFVPLRQETIGGHESQNQLQPIAVPVREEIAV 120
Query: 87 DQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEK 146
++ E + ++ K+ ++ P K + +
Sbjct: 121 NERIEQKIPTEKILDTPKAKQELAKKVEKMQPKGEPAKKIVKKTEPIGGSASLKDALLDA 180
Query: 147 KSIDTVVVRPDKKELLSKVEKSSRKRIPSQD--------------------AIAIVRNRV 186
K + S + + + +V V
Sbjct: 181 KKKTNIQKSQKVSPNTSVTNALAGFKKQTSTVGGGGGVSDGNGGGGGLHDIYAGLVMMSV 240
Query: 187 IANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKS 246
NW+IP+ + L +H +++ G VL + G ++ +A AVI++
Sbjct: 241 RPNWSIPTYSRD--NLVALVHVRIDADGNVLSCVIERSSGRSD-----FDASAVNAVIRT 293
Query: 247 QAFRLSPSTYKSWRNITLFFV 267
+ P+ + ++ + F
Sbjct: 294 KILPPPPTPAQQ--DMIIVFN 312
>gi|255020129|ref|ZP_05292199.1| TolA family protein [Acidithiobacillus caldus ATCC 51756]
gi|254970422|gb|EET27914.1| TolA family protein [Acidithiobacillus caldus ATCC 51756]
Length = 255
Score = 55.7 bits (132), Expect = 7e-06, Method: Composition-based stats.
Identities = 24/215 (11%), Positives = 69/215 (32%), Gaps = 9/215 (4%)
Query: 58 EEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLR 117
K ++Q + Q+ + K A + +++++ K +
Sbjct: 46 AAQKRAAKLAAQRRAQEKAAAQKAAAEKAAAEKAAAEKAAAEKAAAEKAAAEKAAAEKAA 105
Query: 118 MPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQD 177
+ K+++++ K + ++ ++ + ++ +++ + S
Sbjct: 106 AERAAQLKKELAEQAAKAAEAARAKALRERMEAQAKLQAEANIAAARAAQAAEDQKLSAL 165
Query: 178 AIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRE 237
V+ RV W+ L + L+ G ++G + G
Sbjct: 166 FSQEVQRRVYRQWDTNFAAA----LSCVVQIHLSPTGAIIGAPKILRSSGN----PQFDR 217
Query: 238 NARKAVIKSQAFRLSPST-YKSWRNITLFFVPSKM 271
AV ++ F Y ++R + + F ++
Sbjct: 218 AVIAAVEQAAPFVPPLGLSYNAYREVNIQFNAEEL 252
>gi|256061710|ref|ZP_05451847.1| TonB family protein [Brucella neotomae 5K33]
gi|261325714|ref|ZP_05964911.1| TonB [Brucella neotomae 5K33]
gi|261301694|gb|EEY05191.1| TonB [Brucella neotomae 5K33]
Length = 308
Score = 55.7 bits (132), Expect = 7e-06, Method: Composition-based stats.
Identities = 25/224 (11%), Positives = 58/224 (25%), Gaps = 2/224 (0%)
Query: 18 LLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFS 77
+ + L+ P R V + + E + + +
Sbjct: 62 VAAMVVELVPDLVAPAEERVSEEVQPETTTEQPEEVQPEPEPEPQPEAKAEPQQVQEPEE 121
Query: 78 VQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQD 137
V + E + + +A + ++ K K K K+ +
Sbjct: 122 VIPDVVEAQKPEVAVPLPVEKPQEKPEEKPKAEPKPEPKKVEKLKPQKPKPEKVKPKKAE 181
Query: 138 LQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFK 197
+ + E S+ + + +++ + N
Sbjct: 182 KAAKTREASAPRVDADNGAKVAA-SKRGETSASAGVIWAKWTSRLQSHMARNARFLQGKS 240
Query: 198 RFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARK 241
R + + F ++ G VL G + + L E AR+
Sbjct: 241 RNTRGEAHVAFVIDPSGNVLSARIAVSSGDPAVDQLAL-EAARR 283
>gi|294850924|ref|ZP_06791600.1| periplasmic protein TonB [Brucella sp. NVSL 07-0026]
gi|294821567|gb|EFG38563.1| periplasmic protein TonB [Brucella sp. NVSL 07-0026]
Length = 284
Score = 55.7 bits (132), Expect = 7e-06, Method: Composition-based stats.
Identities = 25/224 (11%), Positives = 58/224 (25%), Gaps = 2/224 (0%)
Query: 18 LLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFS 77
+ + L+ P R V + + E + + +
Sbjct: 38 VAAMVVELVPDLVAPAEERVSEEVQPETTTEQPEEVQPEPEPEPQPEAKAEPQQVQEPEE 97
Query: 78 VQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQD 137
V + E + + +A + ++ K K K K+ +
Sbjct: 98 VIPDVVEAQKPEVAVPLPVEKPQEKPEEKPKAEPKPEPKKVEKLKPQKPKPEKVKPKKAE 157
Query: 138 LQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFK 197
+ + E S+ + + +++ + N
Sbjct: 158 KAAETREASAPRVDADNGAKVAA-SKRGETSASAGVIWAKWTSRLQSHMARNARFLQGKS 216
Query: 198 RFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARK 241
R + + F ++ G VL G + + L E AR+
Sbjct: 217 RNTRGEAHVAFVIDPSGNVLSARIAVSSGDPAVDQLAL-EAARR 259
>gi|238760135|ref|ZP_04621283.1| TonB domain protein [Yersinia aldovae ATCC 35236]
gi|238701633|gb|EEP94202.1| TonB domain protein [Yersinia aldovae ATCC 35236]
Length = 220
Score = 55.7 bits (132), Expect = 7e-06, Method: Composition-based stats.
Identities = 25/198 (12%), Positives = 60/198 (30%), Gaps = 12/198 (6%)
Query: 64 FKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPY 123
N + +V + D + + ++ E S + EQ + +
Sbjct: 6 SDPEFTPNSQQTPAVGLSQDFSEPEIEQQESQPEEVNDSLTAPEQPDALLIVAKKEPIKA 65
Query: 124 DKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLS------KVEKSSRKRIPSQD 177
D+ + ++ ++ K V S S+ R +
Sbjct: 66 DRPQQEAVKARKPVVEKKQQNPSKPSPPAVASSATLSGESHHVAAAVNSDSTHNRQAKIN 125
Query: 178 AIAIVRNRVIANWNIPSDFK-RFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLR 236
++ ++ P + + ++ + F +N+ G VL ++ G +L
Sbjct: 126 WRNRLQGHLLDFKRYPPGARKQRRQGSATVRFVVNKDGHVLSVQLINSSGTA-----ILD 180
Query: 237 ENARKAVIKSQAFRLSPS 254
A V ++Q P+
Sbjct: 181 REALATVQRAQPLPKPPA 198
>gi|218887450|ref|YP_002436771.1| protein TolA [Desulfovibrio vulgaris str. 'Miyazaki F']
gi|218758404|gb|ACL09303.1| protein TolA [Desulfovibrio vulgaris str. 'Miyazaki F']
Length = 342
Score = 55.7 bits (132), Expect = 7e-06, Method: Composition-based stats.
Identities = 24/220 (10%), Positives = 63/220 (28%), Gaps = 14/220 (6%)
Query: 58 EEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLR 117
+ + + K Q V +N + +++ + + LK++
Sbjct: 127 AKAISEKKDEKQTKPEPPKDVSKNATAAAPAKPAAPAKDDKPAPKAPDPKDVLKQALADV 186
Query: 118 MPVSPYDKQKISKAT------NKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRK 171
+ ++ +D+ A + ++ + S
Sbjct: 187 QTKTGGAPEQGKTRAGVTSGAAGAKDVANALSALQATVKGGGGGGAAGGGDGSGGEGSGG 246
Query: 172 RIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELV 231
+ V V ++W + L V++ ++ G + G +
Sbjct: 247 VGIAGVYTMQVMQIVRSHWEF-PALANRENLMVRVRVKVAPNGQIQDFSVEQSSGRAD-- 303
Query: 232 RRMLRENARKAVIKSQAFRLSPSTYKSWRNITLFFVPSKM 271
+ KA+ K+ PS ++++ L F +M
Sbjct: 304 ---FDSSTLKALGKTGILPPPPS--AEFQDLVLVFNLQEM 338
>gi|70732084|ref|YP_261840.1| biopolymer transport protein TolA [Pseudomonas fluorescens Pf-5]
gi|68346383|gb|AAY93989.1| biopolymer transport protein TolA [Pseudomonas fluorescens Pf-5]
Length = 353
Score = 55.7 bits (132), Expect = 7e-06, Method: Composition-based stats.
Identities = 22/132 (16%), Positives = 40/132 (30%), Gaps = 11/132 (8%)
Query: 144 AEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLR 203
AE+K + K + + ++R R W P + K +
Sbjct: 227 AEEKKAQALADLLSDKPEREATKSDEVGDSVAGSFDDLIRIRAAEGWARPPSAR--KGMT 284
Query: 204 VKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFR----LSPSTYKSW 259
V++ + G V + G +A AV LSP + +
Sbjct: 285 VELRIGMLPDGTVTTVSVIKSSGDG-----PFDASAVAAVKNIGRLTEMQGLSPKDFAPY 339
Query: 260 RNITLFFVPSKM 271
R+ + F P +
Sbjct: 340 RSFKMTFTPEDL 351
>gi|256027738|ref|ZP_05441572.1| TonB protein [Fusobacterium sp. D11]
gi|289765695|ref|ZP_06525073.1| ligand gated channel protein TonB [Fusobacterium sp. D11]
gi|289717250|gb|EFD81262.1| ligand gated channel protein TonB [Fusobacterium sp. D11]
Length = 262
Score = 55.7 bits (132), Expect = 8e-06, Method: Composition-based stats.
Identities = 34/274 (12%), Positives = 75/274 (27%), Gaps = 19/274 (6%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
++ + IS++LH++ L QL + +++ + + S
Sbjct: 1 MKKYILISLVLHLIILFGFGVMQTTQLEKNEPKNQVVPIAFV--AKQTSENPGSKVLDTE 58
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
+ + S E ++ + ++ E + S+ + E
Sbjct: 59 EREKQSPEPPKPKVEKKQEEKKSEEKKVEKKPEKKEIESNIPSKDAKPVEKQPETTTSEN 118
Query: 123 YDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIV 182
+ + S +S + S S+ +
Sbjct: 119 TQSTESTDKGESTSSDNSSSKGGSTKGTGNGDEGFGSNFISDGDGSYIALS-SKGINYQI 177
Query: 183 RNRVIANW-NIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARK 241
N V ++ + K+++V + F + KG V K
Sbjct: 178 INEVEPDYPSQAESIGYSKQVKVTVKFLVGLKGNVEKADITQSHKDLG-----FDAEVMK 232
Query: 242 AVIKSQAFRLSPSTYKSWRNI------TLFFVPS 269
A+ K + Y + +NI T F P
Sbjct: 233 AIKKWR----FKPIYHNGKNIKVYFVKTFVFDPQ 262
>gi|237714384|ref|ZP_04544865.1| conserved hypothetical protein [Bacteroides sp. D1]
gi|262408216|ref|ZP_06084763.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|294646285|ref|ZP_06723937.1| TonB family C-terminal domain protein [Bacteroides ovatus SD CC 2a]
gi|294806772|ref|ZP_06765599.1| TonB family C-terminal domain protein [Bacteroides xylanisolvens SD
CC 1b]
gi|229445548|gb|EEO51339.1| conserved hypothetical protein [Bacteroides sp. D1]
gi|262353768|gb|EEZ02861.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|292638366|gb|EFF56732.1| TonB family C-terminal domain protein [Bacteroides ovatus SD CC 2a]
gi|294446054|gb|EFG14694.1| TonB family C-terminal domain protein [Bacteroides xylanisolvens SD
CC 1b]
Length = 291
Score = 55.3 bits (131), Expect = 8e-06, Method: Composition-based stats.
Identities = 27/250 (10%), Positives = 67/250 (26%), Gaps = 23/250 (9%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVP-------------------ISRREMLSVDNIYN 46
G ++++HV + LL + + P ++ VD +
Sbjct: 11 GALGALLVHVAVIALLIL-VSFTVPQPDEDAGGVPVMMGNVDAASGFDDPSLVDVDIMDE 69
Query: 47 EDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQ-ENGDRFSDQTKTHATENETKRSSSSK 105
+ + + P Q + E + E + + + K E +
Sbjct: 70 DAAAPPAETEPQLPSEQDLLTQTEEETVTLKPKTEEPKKETVKPKEMVKPKEPVKKPEKT 129
Query: 106 GEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKV 165
+ E+ L + +++ +A K A+ E +
Sbjct: 130 EAEKAAEAKRLAEEKAERERKAAEEAARKRVSGAFGKGAQMTGNKGTAASGTGTEGSKEG 189
Query: 166 EKSSRKRIPSQDA--IAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVD 223
S+ + + + + + ++ RV ++ +N G V+
Sbjct: 190 NSSTGAKTGTGGYGTFDLGGRSLGTGSLPKPVYNVQEEGRVVVNITVNPAGQVISTSISP 249
Query: 224 VVGGTELVRR 233
R
Sbjct: 250 QTNTVNSALR 259
>gi|291391832|ref|XP_002712264.1| PREDICTED: titin [Oryctolagus cuniculus]
Length = 33406
Score = 55.3 bits (131), Expect = 9e-06, Method: Composition-based stats.
Identities = 14/118 (11%), Positives = 29/118 (24%), Gaps = 2/118 (1%)
Query: 32 PISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKT 91
P E + V E +K ++ + V + + + +
Sbjct: 9965 PKKPEEKIPVPIPKKEKAPPAKVPEVPKKPVPEEKVPAPVPKKVEAPPAKVPEVPKKPVP 10024
Query: 92 HATENETKRSSSSKG--EQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKK 147
E K + E + L V P +K+ E + +
Sbjct: 10025 EKKVPEKKVPVPAPKEVEAPPAKVPELPKKVIPEEKKPTPVLKKMEAPPTKVPKKREA 10082
>gi|115526570|ref|YP_783481.1| TonB family protein [Rhodopseudomonas palustris BisA53]
gi|115520517|gb|ABJ08501.1| TonB family protein [Rhodopseudomonas palustris BisA53]
Length = 265
Score = 55.3 bits (131), Expect = 9e-06, Method: Composition-based stats.
Identities = 21/194 (10%), Positives = 53/194 (27%), Gaps = 7/194 (3%)
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
+ +Q + Q+ D + + E K + + E + +
Sbjct: 59 ESFKDAQARDIAPGEEQQQTDAAPPPMEKAELKAEAKTEPVDEPQPVPDEPTPVPPLPTV 118
Query: 123 YDKQ-KISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAI 181
+ + A +Q + + + + S+ +
Sbjct: 119 AEPDVTLQTAAPPKQKKKEEKKDDAEKTPNAAPPVVAASATTAPTMSAARTAQLVSWKRK 178
Query: 182 VRNRVIANWNIPSDF-KRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENAR 240
+ + N P + R + K+ F +++ G V+ V G L
Sbjct: 179 LALHLQRNKRYPPEAQARREAGTTKIAFVVDRSGHVVSSSIVQGSGSA-----ALDRETL 233
Query: 241 KAVIKSQAFRLSPS 254
+ ++Q P+
Sbjct: 234 DLLQRAQPLPTPPA 247
>gi|33151562|ref|NP_872915.1| TobB energy transducing protein [Haemophilus ducreyi 35000HP]
gi|3915148|sp|O51810|TONB_HAEDU RecName: Full=Protein tonB
gi|2843114|gb|AAC01947.1| TonB [Haemophilus ducreyi]
gi|33147782|gb|AAP95304.1| TobB energy transducing protein [Haemophilus ducreyi 35000HP]
Length = 279
Score = 55.3 bits (131), Expect = 9e-06, Method: Composition-based stats.
Identities = 26/239 (10%), Positives = 62/239 (25%), Gaps = 13/239 (5%)
Query: 4 ENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQ 63
GL S+ +H++ V LS++ + EE
Sbjct: 7 RIGLISSVFIHIVLFASFISLVEVSHSDLSDGDSPLSIELVAALLEQPQVAVAPEEVTST 66
Query: 64 FKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPY 123
+ E + + + + K+ K + ++ +
Sbjct: 67 EPETFDEEPEPEPDAIPEPITKPIEKPKEKPKEKPKKPEKPKEKLKKEKPKEKAKQIEAL 126
Query: 124 DKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVE----------KSSRKRI 173
+K +K Q + G +K+ + P+ S +
Sbjct: 127 EKGPEAKQGIVAQAVPGALQGKKEQVGISNGNPNGNSASSSDTGLVNGVLGGNGNGASSN 186
Query: 174 PSQDAIAIVRNRVIANWNIPSDFKRF---KKLRVKMHFQLNQKGFVLGKINVDVVGGTE 229
A ++ + N + K V + F ++ G ++ ++ G
Sbjct: 187 EINAYKAALQRALQHRANNAYPAREKMMRKTGVVTLGFTISPSGKLIDVTVLNSSGNQN 245
>gi|50119021|ref|YP_048188.1| TonB-like protein [Pectobacterium atrosepticum SCRI1043]
gi|49609547|emb|CAG72980.1| TonB-like protein [Pectobacterium atrosepticum SCRI1043]
Length = 273
Score = 55.3 bits (131), Expect = 9e-06, Method: Composition-based stats.
Identities = 28/256 (10%), Positives = 71/256 (27%), Gaps = 25/256 (9%)
Query: 1 MRLENGLAISMILHVMFLLLLYF-NFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEE 59
+R +G +++ LH ++ + + + + P ++ D++ +
Sbjct: 17 VRWGSGSLLALALHAGVIVWMSYHALDSSIEAPPPAMMLMVADSVQSTSSPQDA------ 70
Query: 60 PVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMP 119
+ ++ + Q A + + K + K + P
Sbjct: 71 ---PVGPQQTLSTPQESAAQPEKIMQDVPPLAPAPKPVITTAQKEKPQSQKKVQKKMEKP 127
Query: 120 VSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAI 179
V Q+ + K + S + K D
Sbjct: 128 VQETTPQEAIAPSEKPPAPVTSAPLPGNSQHVAAPYNSDAAQMRKG---------VADWS 178
Query: 180 AIVRNRVIANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLREN 238
+ + + + P+ R + + ++ L++ G VL V G L
Sbjct: 179 SKLLAHLSRHKRYPAQAARQRLQGVAQIRVTLDRTGNVLAVSLVSSSG-----VAPLDTE 233
Query: 239 ARKAVIKSQAFRLSPS 254
+ ++Q P+
Sbjct: 234 SVALPKRAQPLPAPPA 249
>gi|85703629|ref|ZP_01034733.1| hypothetical protein ROS217_22847 [Roseovarius sp. 217]
gi|85672557|gb|EAQ27414.1| hypothetical protein ROS217_22847 [Roseovarius sp. 217]
Length = 313
Score = 55.3 bits (131), Expect = 9e-06, Method: Composition-based stats.
Identities = 23/224 (10%), Positives = 57/224 (25%), Gaps = 13/224 (5%)
Query: 32 PISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKT 91
P R S D + + + + + + S + + + +T
Sbjct: 88 PAPERPSSSPDVSQATEAALPDLRVKPSEITEPALPADTSQALAQSAPQEVLKAEPEPET 147
Query: 92 HATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDT 151
+ + + E+ E A + P + ++ N + T
Sbjct: 148 GLQISRRPEARPREVEEEAAEMAARQAPEPEKKNETRKRSGNTATQDASRGSITGRETAT 207
Query: 152 VVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLN 211
S + ++ +V+ + + + + + F +
Sbjct: 208 AARAGRDTTSQSSAQGNAAASNYP--------GQVMRHLARVPRPRADTRGQALVQFSIA 259
Query: 212 QKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPST 255
+ G + G T L A V ++ F P
Sbjct: 260 EGGRLASVSLARSSGSTR-----LDRAALTVVQRAAPFPAPPQG 298
>gi|85716505|ref|ZP_01047476.1| hypothetical protein NB311A_06171 [Nitrobacter sp. Nb-311A]
gi|85696694|gb|EAQ34581.1| hypothetical protein NB311A_06171 [Nitrobacter sp. Nb-311A]
Length = 139
Score = 55.3 bits (131), Expect = 9e-06, Method: Composition-based stats.
Identities = 13/88 (14%), Positives = 34/88 (38%), Gaps = 2/88 (2%)
Query: 165 VEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDV 224
+ + + +A++ R+ W P+ + + + + F + G +LG+ +
Sbjct: 18 ASEYAMAQDGDVANLAMMSARLKRCWQPPALPRGSPGMEITVLFTFKRDGSLLGRPRITS 77
Query: 225 --VGGTELVRRMLRENARKAVIKSQAFR 250
G T+ R + R +A+ +
Sbjct: 78 ETRGITDEERLIYRTAVMEALQRCSPMP 105
>gi|153809135|ref|ZP_01961803.1| hypothetical protein BACCAC_03445 [Bacteroides caccae ATCC 43185]
gi|149128468|gb|EDM19687.1| hypothetical protein BACCAC_03445 [Bacteroides caccae ATCC 43185]
Length = 290
Score = 55.3 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 30/259 (11%), Positives = 73/259 (28%), Gaps = 23/259 (8%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNE-----DYHSSKYKKIEEP 60
G ++++HV + LL + + P + V + D S + +
Sbjct: 11 GALGALLVHVAVIALLIL-VSFTVPQPDEDAGGIPVMMGNVDAARGFDDPSLVDVDVLDE 69
Query: 61 VVQFKGSSQENLVRDFS----VQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALL 116
+Q L + +E +T+ E + + K
Sbjct: 70 EAPAPAQTQPELPSEQDLLTQTEEETVTLKPKTEEPKKETVKPKEVVKPKKPVKKPEKTE 129
Query: 117 RMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQ 176
+ + +KA + + + + + + + S +
Sbjct: 130 AEKAAEAKRLAEAKAERERKAAEEAARKKVAGAFGKGSQMTGNKGTSAGGTGTEGSKEGN 189
Query: 177 DAIAI-----------VRNRVIANWNIPSDFKRF-KKLRVKMHFQLNQKGFVLGKIN-VD 223
+ + R + ++P ++ RV ++ +N G V+
Sbjct: 190 SSTGAKTGTGGYGTFDLGGRSLGTGSLPKPAYNVQEEGRVVVNITVNPAGQVVATSINPQ 249
Query: 224 VVGGTELVRRMLRENARKA 242
+R+ + ARKA
Sbjct: 250 TNTVNSALRKAAEDAARKA 268
>gi|23009186|ref|ZP_00050329.1| hypothetical protein Magn03004129 [Magnetospirillum magnetotacticum
MS-1]
Length = 117
Score = 55.3 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 17/90 (18%), Positives = 36/90 (40%), Gaps = 2/90 (2%)
Query: 167 KSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVD--V 224
++S P D + + + A W +P RF++ + L + G V+G +
Sbjct: 4 RASEADQPPADTLKALYPALAACWKVPEGLGRFERAEITARLSLRRDGSVIGTPQITFAK 63
Query: 225 VGGTELVRRMLRENARKAVIKSQAFRLSPS 254
G R +L A+ + +++P+
Sbjct: 64 TPGDTRARDILVRATLDAIARCTPIKVTPA 93
>gi|328543879|ref|YP_004303988.1| TonB family protein [polymorphum gilvum SL003B-26A1]
gi|326413623|gb|ADZ70686.1| TonB family protein [Polymorphum gilvum SL003B-26A1]
Length = 352
Score = 55.3 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 23/213 (10%), Positives = 52/213 (24%), Gaps = 6/213 (2%)
Query: 47 EDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKG 106
D + + P VR + S Q
Sbjct: 133 ADAGKVEAVEAARPEQVAVAEPVPTAVRPVEATLVPAQVSAQVSAAEAVPVPTARPERPR 192
Query: 107 EQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVE 166
+ ++ + P + ++ + S + + ++
Sbjct: 193 QTVAAKAPERPVESRPEKPARPTRKAETAAHERKPSRPAPGAGGQAQQTVQQGGATARGA 252
Query: 167 KSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKINVDVV 225
++ + V ++ P+ KR + + F + + G V
Sbjct: 253 SNAEGNAEISNYPGKVAGKLRRALRYPASAKRKRITGEALVGFVVTRSGAAQQVRIVRSS 312
Query: 226 GGTELVRRMLRENARKAVIKSQAFRLSPSTYKS 258
G E L E A + V ++ F P+
Sbjct: 313 GSAE-----LDEAALQTVHRAAPFPPIPAGSNR 340
>gi|119503500|ref|ZP_01625583.1| TonB, C-terminal [marine gamma proteobacterium HTCC2080]
gi|119460562|gb|EAW41654.1| TonB, C-terminal [marine gamma proteobacterium HTCC2080]
Length = 251
Score = 54.9 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 32/249 (12%), Positives = 71/249 (28%), Gaps = 44/249 (17%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
+ L + +H M +L + F F P + ++V + S IE V
Sbjct: 17 IAPALVAASAIHAMLILAIGFGFTW----PGFETQSIAVTVL----LTPSNQAPIEAQHV 68
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
++Q+ L + + +F QT +
Sbjct: 69 ----AAQDQLGTTDAPEPAAAQFQMQTTMTISR--------------------------E 98
Query: 123 YDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIV 182
D A + + + + +++ + +R + ++
Sbjct: 99 LDGADGELAPEEVTPDAIDRQLKDLKQALSSISDQNVQTNNRIGSVAARRSLDAEYLSRW 158
Query: 183 RNRVIANWNIPSDFKR-FKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARK 241
R RV N+ + V++ + G + ++ G T L A+
Sbjct: 159 RARVEQIGNVLYRGRPLSANGDVRLMVTVAANGNLERIRVLESSGDTR-----LDRAAQD 213
Query: 242 AVIKSQAFR 250
V+ + F
Sbjct: 214 TVVLAAPFP 222
>gi|300112857|ref|YP_003759432.1| protein TolA [Nitrosococcus watsonii C-113]
gi|299538794|gb|ADJ27111.1| protein TolA [Nitrosococcus watsonii C-113]
Length = 321
Score = 54.9 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 33/317 (10%), Positives = 90/317 (28%), Gaps = 61/317 (19%)
Query: 6 GLAISMILHVMFLLLLYFNFNV-QLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQF 64
LA+++++HV+F ++L + P++ V + Q
Sbjct: 10 ALALALLVHVIFFIVLLISLGWAPKPEPVNIDPARIVQATVVDKEKVLAEAAQRRQAEQD 69
Query: 65 KGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYD 124
+ Q L + E + + + E + + + + ++ R+ +
Sbjct: 70 ALARQRALAQKREAAERQRAEAQRQQQAKVEQARQETREQRALERKQQEEQARLKRLEAE 129
Query: 125 KQKISKATNKEQDLQGISFA---------------------------------------- 144
++ + ++ + +
Sbjct: 130 RKAKEETARRQAEAEKKRAEEEKRQAEAEKRRLEEERRQAEAAKRKAEEERKKAEAAKRK 189
Query: 145 -----------EKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIP 193
+++ + + + + +++ + + Q V+ RV W P
Sbjct: 190 AEEEARKKAEADRRKAEKARREEELQAGIKAEQQAEQIELAKQRFTDQVKMRVERYWIRP 249
Query: 194 SDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSP 253
+ L+V + ++ G V + G R +A+ AV K+ +
Sbjct: 250 PASQDS--LKVSLQVEMLPSGEVRNVKVTESSGD-----RAFDSSAQAAVYKAAPLPVPS 302
Query: 254 ST--YKSWRNITLFFVP 268
+ + R F P
Sbjct: 303 ESAAAEELRVFNFDFKP 319
>gi|86749213|ref|YP_485709.1| TonB-like protein [Rhodopseudomonas palustris HaA2]
gi|86572241|gb|ABD06798.1| TonB-like protein [Rhodopseudomonas palustris HaA2]
Length = 264
Score = 54.9 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/246 (10%), Positives = 68/246 (27%), Gaps = 23/246 (9%)
Query: 8 AISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGS 67
++ LHV + L N +V++ + V H +
Sbjct: 20 VAAVALHVGGVALAMANRDVEVDDDALGAPAIEVGLEMMSPKHEATDLPPGPDT------ 73
Query: 68 SQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQK 127
+ + + + T+ ++ + + ++ P ++
Sbjct: 74 --------DASAASPALNEQKAEVQETDLPKDVPQETEEADRVVTTQEVKKPDEEVKEKA 125
Query: 128 ISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVI 187
+ + + + + A + + + R R Q + ++
Sbjct: 126 VVQQQASTESVAAEATAMPSNETAKEGPRSVAPAQGVGQAAQRIRATWQKELVAYLDKHK 185
Query: 188 ANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQ 247
K +R+ + F+L++ G VL V+ G + A + +S
Sbjct: 186 RY----PKDGSQKNVRIVVSFELDRVGHVLSTRIVEGSGDA-----AFDQAALDMIKRSD 236
Query: 248 AFRLSP 253
P
Sbjct: 237 PVPAPP 242
>gi|126740080|ref|ZP_01755770.1| Putative TonB protein [Roseobacter sp. SK209-2-6]
gi|126718899|gb|EBA15611.1| Putative TonB protein [Roseobacter sp. SK209-2-6]
Length = 284
Score = 54.9 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 30/239 (12%), Positives = 65/239 (27%), Gaps = 18/239 (7%)
Query: 32 PISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKT 91
P R +M++ + E + LV +E DQ+
Sbjct: 60 PPPRPQMVNPEL---EQPLAPTEAPQMPEFELADAPRAAVLVALKEPEEADVVEIDQSTP 116
Query: 92 HATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDT 151
+ PV + + T+ + Q + + +
Sbjct: 117 PPPPPPEPEPEPEPKPEPKPRPKPAPKPVETPPTAQTANQTSAGRAAQRAAGSGGGAQAG 176
Query: 152 VVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLN 211
+ + A +R+R+ P+ + RV + +
Sbjct: 177 AAGGASTATISAGQR-----AKLQSIWGAKIRSRIERRKRYPAGARGSG--RVVLRITVA 229
Query: 212 QKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPSTYKSWR---NITLFFV 267
G ++ + G + A KAV ++ F +P Y + + N+ + F
Sbjct: 230 ASGALVNYRVANSSG-----VAAFDQAALKAVARAGKFPKAPKGYDAAQLTFNLPMNFS 283
>gi|226942478|ref|YP_002797551.1| TonB protein [Azotobacter vinelandii DJ]
gi|226717405|gb|ACO76576.1| TonB protein [Azotobacter vinelandii DJ]
Length = 297
Score = 54.9 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/235 (11%), Positives = 65/235 (27%), Gaps = 14/235 (5%)
Query: 24 NFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENG- 82
+ +L P + L + + K Q + E+ + +
Sbjct: 38 GISFELPKPAEVSKTLEITLATFKSEEKPKEADFLAQDDQQGSGTLEHQAEPKTSETAPF 97
Query: 83 -DRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNK----EQD 137
D +Q K A ++ + PV +
Sbjct: 98 QDTEIEQVAPPPAAPPAAPKQEPKAALATRKPRPEKTPVKHEPAKPAPPLPATPTFDSAQ 157
Query: 138 LQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFK 197
L + + + R K+ + ++ +S R R +V N+
Sbjct: 158 LSSEIASLEAELAEETQRYAKRPRIHRLNAASTMRDKGAWYKEEWRRKVERIGNLNYPED 217
Query: 198 RFKK---LRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAF 249
++ +++ +N+ G + ++ G L + A++ V + +
Sbjct: 218 ARRQHLYGHLRLLVSINRDGTLYEVQVLESSGE-----PQLDQAAQRIVRLAAPY 267
>gi|238785149|ref|ZP_04629143.1| hypothetical protein yberc0001_7480 [Yersinia bercovieri ATCC
43970]
gi|238713964|gb|EEQ05982.1| hypothetical protein yberc0001_7480 [Yersinia bercovieri ATCC
43970]
Length = 278
Score = 54.9 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 22/249 (8%), Positives = 62/249 (24%), Gaps = 31/249 (12%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
L + + LH M + ++ + ++ + S
Sbjct: 39 SLLLGIGLH-MLAAAFMLGWITKMAPQGVLPPAVMIELTLYQQAKSLPLDVPLGQ----- 92
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
+ E K A + ++ +
Sbjct: 93 -------------------QQNMAAPDEAAPEKLPEELPKLTAAPNGTHAIKPEKVVPKR 133
Query: 126 QKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNR 185
+ + L ++ + + +K + ++S + V
Sbjct: 134 KITPVKPRTDTPLPVVAEKAAPTTSAPLSGESQKNAATFSSEASAAISGKASWQSDVLAH 193
Query: 186 VIANWNIPSDF-KRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVI 244
+ P + + + ++ F ++ +G VL G ++L A +
Sbjct: 194 LARYKRYPREALRYRLEGISQIRFVVDHQGKVLTAELFSSSGA-----KILDREAMVLIS 248
Query: 245 KSQAFRLSP 253
++Q + P
Sbjct: 249 RAQPLPIPP 257
>gi|306841380|ref|ZP_07474083.1| TonB family protein [Brucella sp. BO2]
gi|306288565|gb|EFM59914.1| TonB family protein [Brucella sp. BO2]
Length = 296
Score = 54.9 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/224 (11%), Positives = 58/224 (25%), Gaps = 2/224 (0%)
Query: 18 LLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFS 77
+ + L+ P R V + + E + + +
Sbjct: 50 VAAMVVELVPDLVAPAEERVSEEVQPETTTEQPEEVQPEPEPEPQPEAKAEPQQVQEPEE 109
Query: 78 VQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQD 137
V + E + + +A + ++ K K K K+ +
Sbjct: 110 VIPDVVEAQKPEVAVPLPVEKPQEKPEEKPKAEPKPEPKKVEKPKPQKPKPEKVKPKKAE 169
Query: 138 LQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFK 197
+ + E S+ + + +++ + N
Sbjct: 170 KAAETREASAPRVDADNGTKVAA-SKRGETSASAGVIWAKWTSRLQSHMARNARFLQGKS 228
Query: 198 RFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARK 241
R + + F ++ G VL G + + L E AR+
Sbjct: 229 RNTRGEAHVAFVIDPSGNVLSARIAVSSGDPAVDQLAL-EAARR 271
>gi|254522040|ref|ZP_05134095.1| protein TolA [Stenotrophomonas sp. SKA14]
gi|219719631|gb|EED38156.1| protein TolA [Stenotrophomonas sp. SKA14]
Length = 351
Score = 54.9 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 22/226 (9%), Positives = 62/226 (27%), Gaps = 6/226 (2%)
Query: 45 YNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSS 104
+ ++ + + K ++ + + QE ++ K + + K + +
Sbjct: 131 QEAANALAISQEKAKQEQEAKRRQEQIDLTERKRQEEAEQKLRLAKQQEEDAKKKLADQA 190
Query: 105 KGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSK 164
+ E+ + K++ ++ K + + A ++
Sbjct: 191 RQAADKAEAEKQKKIAEIRAKREQAEKEAKLAEQKLRQVAAARNAAGSAAAGASGASQPA 250
Query: 165 VEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDV 224
S A ++ +V++ W P + R ++ G V+
Sbjct: 251 AGGGGNSDDLSAKYAAAIQAKVLSQWVRPDTVPLGQ--RCQITITQIPGGTVMQAKV--- 305
Query: 225 VGGTELVRRMLRENARKAVIKSQAFRLSPSTYKSWRNITLFFVPSK 270
+ + AV+ +Q R + F
Sbjct: 306 -SPNCPYDEAGKRSIEAAVLNAQPLPYRGFESVFARTLNFTFTAQD 350
>gi|226329253|ref|ZP_03804771.1| hypothetical protein PROPEN_03156 [Proteus penneri ATCC 35198]
gi|225202439|gb|EEG84793.1| hypothetical protein PROPEN_03156 [Proteus penneri ATCC 35198]
Length = 265
Score = 54.9 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 34/250 (13%), Positives = 64/250 (25%), Gaps = 25/250 (10%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
GL S++ HV +++ + +++D + Q
Sbjct: 18 GLTASILFHVTLVVVAIGWITSKEERYGVLPPAMTMDL----------------GIYQLA 61
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
+ +++ E + +T + L
Sbjct: 62 QTETKDVP---VGPEKVMSVPEPAETEPEPIKEVLDLPKMPVVEQGTYERLPEKPKVKPV 118
Query: 126 QKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNR 185
K K D +S A + SS ++V +
Sbjct: 119 VKPKPVAVKVPDDLPVSEAPSDITSAPASGSNTSSSAQFNSLSSSSVSGQIGWESLVHSH 178
Query: 186 VIANWNIPSDFKRFKKLRVK-MHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVI 244
+ P RFK V + LN KG +L G R+L + A +
Sbjct: 179 INTYKRYPRTALRFKATGVTQVSIMLNAKGELLDAKVETSSGN-----RILDKEALNTIK 233
Query: 245 KSQAFRLSPS 254
++ F S
Sbjct: 234 RASPFPAPES 243
>gi|254467480|ref|ZP_05080890.1| putative TonB protein [Rhodobacterales bacterium Y4I]
gi|206684481|gb|EDZ44964.1| putative TonB protein [Rhodobacterales bacterium Y4I]
Length = 276
Score = 54.9 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 23/217 (10%), Positives = 55/217 (25%), Gaps = 9/217 (4%)
Query: 41 VDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKR 100
+ + ++E + Q V F + + T
Sbjct: 51 AEMVEAWQRPPQNMPQLEPDLSQPPTVPAAPAVPQFELARAPRAAAQIALARPAPAGTLE 110
Query: 101 SSSSKGEQALKESALLRMPVSPYDK--QKISKATNKEQDLQGISFAEKKSIDTVVVRPDK 158
++ K+ +P K + +A EQ +
Sbjct: 111 VETATAPPPPKKQPETAAKPAPRPKAVPEPRQARKAEQTAASRAGQRAAGSGGGAQAGQA 170
Query: 159 KELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLG 218
+ ++ ++ A +R R+ P+ + +++ G +L
Sbjct: 171 GNAAAATAQAGQEAKLQAVWGAKIRARIERRKRFPAGASGSG--VAVVRITVSRSGQLLD 228
Query: 219 KINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPST 255
G + A +AV ++ F +P
Sbjct: 229 YRIAKSSGSA-----AFDQAALQAVARAGTFPSAPQK 260
>gi|291287610|ref|YP_003504426.1| TonB family protein [Denitrovibrio acetiphilus DSM 12809]
gi|290884770|gb|ADD68470.1| TonB family protein [Denitrovibrio acetiphilus DSM 12809]
Length = 282
Score = 54.9 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/245 (10%), Positives = 72/245 (29%), Gaps = 13/245 (5%)
Query: 20 LLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQ 79
LL + + ++ + + E+L D
Sbjct: 23 LLDLSTPEKEKERPISVSVIPKEKPKPAPKEEPAPEAKTPKKTIDDVPLDEDLKTDLDQM 82
Query: 80 ENGDRFSDQTKTHATENETKRSSSSKGEQALKESALL---RMPVSPYDKQKISKATNKEQ 136
++ K ++E + + + ++ + + + + +
Sbjct: 83 APVPDMGEEQKQMKQKSERQGDEPPEKPEETQQRKQKESSKQEIIDDNAPVQLPSVTPKD 142
Query: 137 DLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPS---QDAIAIVRNRVIANWNIP 193
+L + + + ++ + K + + E S + Q R+ W P
Sbjct: 143 ELSQGQIDDILNPEDIIDKYAKGGGMPEGEDSVSMQYVKLKYQSYFYKFARRLYQVWAYP 202
Query: 194 SDFK-RFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLS 252
R ++ V++ F +++ G + + G + L A A+ K+ L
Sbjct: 203 RSAAMRGEQGTVRISFVISKDGMISSIKVLQSSGYPD-----LDREAVSALKKTAGVPLP 257
Query: 253 PSTYK 257
+Y+
Sbjct: 258 -ESYE 261
>gi|190575563|ref|YP_001973408.1| putative TolA transmembrane protein [Stenotrophomonas maltophilia
K279a]
gi|190013485|emb|CAQ47120.1| putative TolA transmembrane protein [Stenotrophomonas maltophilia
K279a]
Length = 351
Score = 54.9 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 21/216 (9%), Positives = 61/216 (28%), Gaps = 6/216 (2%)
Query: 55 KKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESA 114
++ + + K ++ + + QE ++ K + + K++ + E+
Sbjct: 141 QEKAKQEQEAKRRQEQIDLTERKRQEEAEQKLRLAKQQEADEKKKQAEQERVAADKAEAE 200
Query: 115 LLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIP 174
+ +++ ++ K + + A ++
Sbjct: 201 KQKKIAEIRARREQAEKEAKLAEQKLRQVAAARNAAGSAAAGSSGASQPAAGGGGNSDDL 260
Query: 175 SQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRM 234
S A ++ +V++ W P + R ++ G V+
Sbjct: 261 SAKYAAAIQAKVLSQWVRPDTVPLGQ--RCQITITQIPGGTVMQAKV----SPNCPYDEA 314
Query: 235 LRENARKAVIKSQAFRLSPSTYKSWRNITLFFVPSK 270
+ + AV+ +Q R + F
Sbjct: 315 GKRSIEAAVLNAQPLPYRGFESVFARTLNFTFTAQD 350
>gi|82701671|ref|YP_411237.1| TonB-like [Nitrosospira multiformis ATCC 25196]
gi|82409736|gb|ABB73845.1| TonB-like protein [Nitrosospira multiformis ATCC 25196]
Length = 333
Score = 54.9 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 35/282 (12%), Positives = 81/282 (28%), Gaps = 40/282 (14%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPV 61
RL+ + +S+ILHV+ L + F F + + +S L V + E + +E +
Sbjct: 32 RLKTAILVSVILHVVVLSGVTFKFPLPQIRAVSAP--LEVMLVNREPALPPAAEDRKEAL 89
Query: 62 VQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVS 121
+ +S + + A + S+ Q L P+
Sbjct: 90 PRVARASPAVKGNASRHPAQPSLPLPKQEDTANIPGETIADSAAAVQEAGPRELRTPPLM 149
Query: 122 PYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPS------ 175
+ ++ ++ L + + K+ D +L+ + +R
Sbjct: 150 AAPENDSHQSADEPDPLLAPAQPQIKTGQDQNAIFDTADLVQRGLAIARVAARGDASLET 209
Query: 176 -------------------QDAIAIVRNRVIANWNIPSDFKRFKK---LRVKMHFQLNQK 213
R +V N+ ++ +++ +
Sbjct: 210 YQKPLKRKFIGSRTRDYRFARYAEDWRLKVERIGNLNYPEAAKREQLYGSLQLTVGIRSD 269
Query: 214 GFVLGKINVDVVGGTELVRRMLRENARKAVIKS-----QAFR 250
G + G ++L + A + V + F
Sbjct: 270 GSLESVEINRSSGK-----KILDQAAVRIVKLAGQNGFAPFP 306
>gi|254719669|ref|ZP_05181480.1| TonB family protein [Brucella sp. 83/13]
gi|265984683|ref|ZP_06097418.1| TonB-dependent receptor protein [Brucella sp. 83/13]
gi|306840055|ref|ZP_07472842.1| TonB family protein [Brucella sp. NF 2653]
gi|264663275|gb|EEZ33536.1| TonB-dependent receptor protein [Brucella sp. 83/13]
gi|306404869|gb|EFM61161.1| TonB family protein [Brucella sp. NF 2653]
Length = 308
Score = 54.9 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 22/224 (9%), Positives = 54/224 (24%), Gaps = 3/224 (1%)
Query: 18 LLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFS 77
+ + L+ P R V + + E + + +
Sbjct: 62 VAAMVVELVPDLVAPAEERVSEEVQPETTTEQPEEVQPEPEPEPQPEAKAEPQQVQEPEE 121
Query: 78 VQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQD 137
V + E + + +A + ++ K K K K+ +
Sbjct: 122 VIPDVVEAQKPEVAVPLPVEKPQEKPEEKPKAEPKPEPKKVEKLKPQKPKPEKVKPKKAE 181
Query: 138 LQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFK 197
+ + E S+ + + +++ + N
Sbjct: 182 KAAETREASAPRVDADNGAKLAA-SKRGETSASAGVIWAKWTSRLQSHMARNARFLQGKS 240
Query: 198 RFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARK 241
R + + F ++ G VL G + A +
Sbjct: 241 RNTRGEAHVAFVIDPSGNVLSARIAVSSG--DPAVDQFALEAAR 282
>gi|160896930|ref|YP_001562512.1| TonB family protein [Delftia acidovorans SPH-1]
gi|160362514|gb|ABX34127.1| TonB family protein [Delftia acidovorans SPH-1]
Length = 287
Score = 54.9 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 38/254 (14%), Positives = 73/254 (28%), Gaps = 19/254 (7%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
L+ L +S+ LH + + V L V + +
Sbjct: 13 LQLALGVSIALHAGLFSFRFIDPERFDRVFQDTP--LEVILVNARANEQPDKAQAIAQTS 70
Query: 63 QFKGSSQEN-----LVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLR 117
G + + ++ GD F ++ + + E + ++ + + L
Sbjct: 71 LAGGGEADKGRASSPMPYSALTAVGDDFEERQRQIDSMQEQQTVLLTQLRKQVAALPPLD 130
Query: 118 MPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQD 177
+ ++ K Q L + +K I+ RP K+ +
Sbjct: 131 PREAAKQTKEQQAQQEKRQQLVKLLAEIEKRINEENARPKKRYISPSTR-----EAVYAI 185
Query: 178 AIAIVRNRVIANWNIPSDFKRFKKL--RVKMHFQLNQKGFVLGKINVDVVGGTELVRRML 235
+R +V + KKL + M +N G VL V G R+L
Sbjct: 186 YYDGLRRKVEDKGTENFPEQAGKKLYGELVMILTVNHDGRVLSTEIVQGSGN-----RLL 240
Query: 236 RENARKAVIKSQAF 249
A + F
Sbjct: 241 DTRAEAIARAAGPF 254
>gi|86605928|ref|YP_474691.1| TonB family protein [Synechococcus sp. JA-3-3Ab]
gi|86554470|gb|ABC99428.1| TonB family protein [Synechococcus sp. JA-3-3Ab]
Length = 363
Score = 54.9 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 22/181 (12%), Positives = 52/181 (28%), Gaps = 12/181 (6%)
Query: 87 DQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEK 146
+ E ++ S A + + P D ++ + G +
Sbjct: 179 EPLPVQPRERDSDPSQLQPVAPAPQPPTEVLPAERPSDASQLGPPLSASAPSDGAGIQGR 238
Query: 147 KSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKM 206
+ ++R + +A ++ +V NW R +
Sbjct: 239 GASGLANPTQSAPN---PPSVAARANVDWGPWLAALQRKVEQNWIPGQTGTSR---RTVV 292
Query: 207 HFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPSTYKSWRNITLFF 266
F + + G + G + + A A+ ++ F P Y+ ++T+ F
Sbjct: 293 IFTVGRGGELQSIRLARTSGSQQT-----DDAALTAIQRAAPFLPLPEAYEG-NSVTINF 346
Query: 267 V 267
Sbjct: 347 T 347
>gi|194366892|ref|YP_002029502.1| protein TolA [Stenotrophomonas maltophilia R551-3]
gi|194349696|gb|ACF52819.1| protein TolA [Stenotrophomonas maltophilia R551-3]
Length = 351
Score = 54.9 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 22/216 (10%), Positives = 60/216 (27%), Gaps = 6/216 (2%)
Query: 55 KKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESA 114
++ + + K ++ + + QE ++ K + + K++ + E+
Sbjct: 141 QEKAKQEQEAKRRQEQIDLTERKRQEEAEQKLRLAKQQEADEKKKQAEQERVAADKAEAE 200
Query: 115 LLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIP 174
+ +++ ++ K + + A ++
Sbjct: 201 KQKKIAEIRARREQAEKEAKLAEQKLRQVAAARNAAGSAAAGASGAAQPAGGGGGTSDDL 260
Query: 175 SQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRM 234
S A ++ +V++ W P + R + G V+
Sbjct: 261 SAKYAAAIQAKVLSQWVRPDTVPLGQ--RCTITITQIPGGTVMQAKV----SPNCPYDEA 314
Query: 235 LRENARKAVIKSQAFRLSPSTYKSWRNITLFFVPSK 270
R + AV+ +Q R + F
Sbjct: 315 GRRSIEAAVLNAQPLPYRGFESVFARTLNFTFTAQD 350
>gi|295086527|emb|CBK68050.1| TonB family C-terminal domain [Bacteroides xylanisolvens XB1A]
Length = 290
Score = 54.5 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/249 (10%), Positives = 66/249 (26%), Gaps = 22/249 (8%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVP-------------------ISRREMLSVDNIYN 46
G ++++HV + LL + + P ++ VD +
Sbjct: 11 GALGALLVHVAVIALLIL-VSFTVPQPDEDAGGVPVMMGNVDAASGFDDPSLVDVDIMDE 69
Query: 47 EDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKG 106
+ ++ ++E V E + + + K E +
Sbjct: 70 DAAAPAETAPELPSEQDLLTQTEEETVTLKPKTEEPKKETVKPKEVVKPKEPVKKPEKTE 129
Query: 107 EQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVE 166
+ E+ L + +++ +A K A+ E +
Sbjct: 130 AEKAAEAKRLAEEKAERERKAAEEAARKRVSGAFGKGAQMTGNKGTAASGTGTEGSKEGN 189
Query: 167 KSSRKRIPSQDA--IAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDV 224
S+ + + + + + ++ RV ++ +N G V+
Sbjct: 190 SSTGAKTGTGGYGTFDLGGRSLGTGSLPKPVYNVQEEGRVVVNITVNPAGQVISTSISPQ 249
Query: 225 VGGTELVRR 233
R
Sbjct: 250 TNTVNSALR 258
>gi|237719138|ref|ZP_04549619.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
gi|298480235|ref|ZP_06998433.1| TonB exported protein [Bacteroides sp. D22]
gi|229451517|gb|EEO57308.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
gi|298273516|gb|EFI15079.1| TonB exported protein [Bacteroides sp. D22]
Length = 290
Score = 54.5 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/249 (10%), Positives = 66/249 (26%), Gaps = 22/249 (8%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVP-------------------ISRREMLSVDNIYN 46
G ++++HV + LL + + P ++ VD +
Sbjct: 11 GALGALLVHVAVIALLIL-VSFTVPQPDEDAGGVPVMMGNVDAASGFDDPSLVDVDIMDE 69
Query: 47 EDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKG 106
+ ++ ++E V E + + + K E +
Sbjct: 70 DAAAPAETAPELPSEQDLLTQTEEETVTLKPKTEEPKKETVKPKEVVKPKEPVKKPEKTE 129
Query: 107 EQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVE 166
+ E+ L + +++ +A K A+ E +
Sbjct: 130 AEKAAEAKRLAEEKAERERKAAEEAARKRVSGAFGKGAQMTGNKGTAASGTGTEGSKEGN 189
Query: 167 KSSRKRIPSQDA--IAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDV 224
S+ + + + + + ++ RV ++ +N G V+
Sbjct: 190 SSTGAKTGTGGYGTFDLGGRSLGTGSLPKPVYNVQEEGRVVVNITVNPAGQVISTSISPQ 249
Query: 225 VGGTELVRR 233
R
Sbjct: 250 TNTVNSTLR 258
>gi|294341043|emb|CAZ89438.1| putative Tol-Pal system, TolA [Thiomonas sp. 3As]
Length = 332
Score = 54.5 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 28/292 (9%), Positives = 74/292 (25%), Gaps = 60/292 (20%)
Query: 5 NGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIE------ 58
++ + H++ + L+ F + + P E + + ++
Sbjct: 24 RAFGLAALFHLLLIALIAFGVHWKSHPP----EAVEAELWSPTVQRAAPRPTAPMERKQP 79
Query: 59 -------------------EPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETK 99
+ L ++ + Q E +
Sbjct: 80 QPQPQPAPPPPPPPKPVAAPKPEPQVQQADIVLKQEREAALKKQQAEQQALIEKRLKEEQ 139
Query: 100 RSSSSKGEQA--------------------------LKESALLRMPVSPYDKQKISKATN 133
+ + + ++ +E + ++ + K
Sbjct: 140 KKLAEEKQRLAEQKQQQELKQQQLAEQRKQQQEQKLRQEKLAEQKKLAEQKRLAELKQKK 199
Query: 134 KEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIP 193
EQ ++ + + +++ + ++R PS A + + V N P
Sbjct: 200 LEQQQTQLAASSRDDYMKQLMQQAGTGAANSTGTAARTSGPSGTYAARIASLVRENVTYP 259
Query: 194 SDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIK 245
+ RV + L G VL G T + +A+ +
Sbjct: 260 EINQITGDPRVTVLVNLAPDGAVLTAKIERSSGVTSW-----DQAVLRAIER 306
>gi|13277329|emb|CAC34389.1| TonB protein [Rhizobium leguminosarum]
Length = 454
Score = 54.5 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 32/247 (12%), Positives = 67/247 (27%), Gaps = 21/247 (8%)
Query: 24 NFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGD 83
+ P+ M +V ++ S + EP V S E+ V +
Sbjct: 196 TVPPEQAQPVETETMETVQSVQEVTRVSPEAVVAAEPEVLVSESPAESFVAQPMATAVPE 255
Query: 84 RFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISF 143
+ E ++ +E + + P DK K K + +
Sbjct: 256 QPMPDIAQATVPEEVVPTAVQPTAVPPEEVKTVEVSPEPEDKPKPKAEKPKPVEKKQSQK 315
Query: 144 AEKKSIDTVVVRPDKKELLSKVEKSSRKR---------------IPSQDAIAIVRNRVIA 188
K + + + + + + ++ R+
Sbjct: 316 RAKPAGGKEGSDREDSTRGTVNGQHGPQTDGTSTTTGGTDGMGSAAVANYPGKIQKRIRR 375
Query: 189 NWNIPSDFKR-FKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQ 247
+P ++K + V++ +N G V G E L + V ++
Sbjct: 376 AVRVPDEYKNKSDGMTVRIQLTINGTGRVASVSVARSSGIAE-----LDKAVLDGVRRAA 430
Query: 248 AFRLSPS 254
F PS
Sbjct: 431 PFPPLPS 437
>gi|124268384|ref|YP_001022388.1| periplasmic protein/ biopolymer transport [Methylibium
petroleiphilum PM1]
gi|124261159|gb|ABM96153.1| Periplasmic protein/ biopolymer transport [Methylibium
petroleiphilum PM1]
Length = 296
Score = 54.5 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 33/258 (12%), Positives = 66/258 (25%), Gaps = 10/258 (3%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
L L IS +H + L + + + V L V + N K
Sbjct: 18 LHVALLISFGVHAVLLTVRFVDPEGFNRVFKDTP--LEVILV-NARSTEPPLKAQAIAQA 74
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
G + R S + + + + + L P
Sbjct: 75 ALAGGGEAQAGRATSPLPPSALTEVGDSLEDARQQIQSLQEQQMQLLAQIRRELARLPPP 134
Query: 123 YDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIV 182
++ + Q Q + + + + S ++
Sbjct: 135 DPQRDEGSPDARAQAEQRQQMLQMLAEIEKRINDANARPKKRYVSPSTSEAVYAVYYDVL 194
Query: 183 RNRVIANWNIPSDFKRFKKL--RVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENAR 240
R ++ + + +KL + M ++ G VL V G +R L A+
Sbjct: 195 RRKIEERGTLNFPEDKGRKLYGELTMIVTVDALGQVLDTEIVQSSG-----QRTLDRRAQ 249
Query: 241 KAVIKSQAFRLSPSTYKS 258
V + F +
Sbjct: 250 AIVRAASPFGPFTDAMRK 267
>gi|86157088|ref|YP_463873.1| TonB-like protein [Anaeromyxobacter dehalogenans 2CP-C]
gi|85773599|gb|ABC80436.1| Cell division and transport-associated protein TolA
[Anaeromyxobacter dehalogenans 2CP-C]
Length = 255
Score = 54.5 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 19/255 (7%), Positives = 56/255 (21%), Gaps = 33/255 (12%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPV 61
R+ + S+++H + + K I +
Sbjct: 14 RMWPAVLASVMVHAGLITWALVR--------------------QQGPEIDLEQKPIVAKL 53
Query: 62 VQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVS 121
V+ E + + A
Sbjct: 54 VRLGEKRPEQWLPRKEQPPEPAAAEPMPAVATAPAPAPAPPAPAAPVPGARPAPTPPAPR 113
Query: 122 PYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAI 181
+ + A + +S +++ P+ + +A+
Sbjct: 114 APARTGPTTAGSSTSVSSLLSRVKQEVERERWGDPEGDPAGDAS-----EAGEGDRYLAL 168
Query: 182 VRNRVIANWNIPSDFKRFKKL--RVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENA 239
V+ + N+ +P+ ++ + + ++ G + G +
Sbjct: 169 VKRALQENYRVPATISERDRMYLKGTVVLWIDPDGNIARWRIEKSSGNG-----AFDDAL 223
Query: 240 RKAVIKSQAFRLSPS 254
+ V + P
Sbjct: 224 ERTVRQ-TRLPPPPD 237
>gi|113868786|ref|YP_727275.1| hypothetical protein H16_A2830 [Ralstonia eutropha H16]
gi|113527562|emb|CAJ93907.1| hypothetical membrane associated protein [Ralstonia eutropha H16]
Length = 345
Score = 54.5 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 29/224 (12%), Positives = 58/224 (25%), Gaps = 8/224 (3%)
Query: 47 EDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKG 106
E +K E + +Q + + +Q + E + + +
Sbjct: 130 EAERKEAARKEAEQREAERKEAQRKDDAKKKAAQQEQQRKEQAERKEAERKEADARAKAQ 189
Query: 107 EQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVE 166
A ++ + D +K + A +++ +
Sbjct: 190 ADAKAKADAENKAKAKADADAKAKREAAANAQRKSELARLQALAGGSGAGGGGVGSTAGA 249
Query: 167 KSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVG 226
+ S VR RV N D + QL G +L G
Sbjct: 250 GAGGGGKASPGYADRVRRRVKPNIVFGEDVPG--NPTAVVSVQLAPDGSLLSARLSKSSG 307
Query: 227 GTELVRRMLRENARKAVIKSQAFRLSPSTYKSWRNITLFFVPSK 270
+ +AV +S + K+ + T+ F P
Sbjct: 308 NSGW-----DNAVLRAVERSDPLPRDENG-KAPASFTITFRPKD 345
>gi|300721154|ref|YP_003710422.1| putative Protein tonB [Xenorhabdus nematophila ATCC 19061]
gi|297627639|emb|CBJ88160.1| putative Protein tonB [Xenorhabdus nematophila ATCC 19061]
Length = 267
Score = 54.5 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 30/196 (15%), Positives = 63/196 (32%), Gaps = 15/196 (7%)
Query: 72 LVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKA 131
L S + A + + + Q + + P ++ +K
Sbjct: 83 LTAPESPTK---------PEIALDKAVHPENRVEKPQGSHKPKKRQKPQKEKPQEIAAKK 133
Query: 132 TNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWN 191
+ +Q AE D V + + + + + A +R + +
Sbjct: 134 PIQSTPVQKEINAETHGSDQVNSQSSMSRASTSQPLVGQGKSEWDNYHARLRQEIEHHKE 193
Query: 192 IPSDFKRFK-KLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFR 250
P KR K + V ++F L G + V+ G + L A A+ ++++
Sbjct: 194 YPRKAKRMKQQGIVIINFTLLNDGTLTAAKVVNSSGNS-----TLDNAALNAIHRARSVG 248
Query: 251 LSPSTYKSWRNITLFF 266
+ P+ S + L F
Sbjct: 249 VKPADIPSDVTLRLDF 264
>gi|293368687|ref|ZP_06615293.1| TonB family C-terminal domain protein [Bacteroides ovatus SD CMC
3f]
gi|292636228|gb|EFF54714.1| TonB family C-terminal domain protein [Bacteroides ovatus SD CMC
3f]
Length = 290
Score = 54.5 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/249 (10%), Positives = 66/249 (26%), Gaps = 22/249 (8%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVP-------------------ISRREMLSVDNIYN 46
G ++++HV + LL + + P ++ VD +
Sbjct: 11 GALGALLVHVAVIALLIL-VSFTVPQPDEDAGGVPVMMGNVDAASGFDDPSLVDVDIMDE 69
Query: 47 EDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKG 106
+ ++ ++E V E + + + K E +
Sbjct: 70 DAAAPAETAPELPSEQDLLTQTEEETVTLKPKTEEPKKETVKPKEVVKPKEAVKKPEKTE 129
Query: 107 EQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVE 166
+ E+ L + +++ +A K A+ E +
Sbjct: 130 AEKAAEAKRLAEEKAERERKAAEEAARKRVSGAFGKGAQMTGNKGTAASGTGTEGSKEGN 189
Query: 167 KSSRKRIPSQDA--IAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDV 224
S+ + + + + + ++ RV ++ +N G V+
Sbjct: 190 SSTGAKTGTGGYGTFDLGGRSLGTGSLPKPVYNVQEEGRVVVNITVNPAGQVISTSISPQ 249
Query: 225 VGGTELVRR 233
R
Sbjct: 250 TNTVNSALR 258
>gi|312962754|ref|ZP_07777242.1| hypothetical protein PFWH6_4676 [Pseudomonas fluorescens WH6]
gi|311282971|gb|EFQ61564.1| hypothetical protein PFWH6_4676 [Pseudomonas fluorescens WH6]
Length = 357
Score = 54.5 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/139 (15%), Positives = 38/139 (27%), Gaps = 11/139 (7%)
Query: 137 DLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDF 196
AE+K + + R + ++R R W P
Sbjct: 224 QEAARKSAEEKKAQALADLLSDTPQRQQALADERGDEVAGSFDDLIRARAAEGWTRPPSA 283
Query: 197 KRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFR----LS 252
+ K + V + + G V G +A AV +
Sbjct: 284 R--KGMTVVLQIGMLPDGTVTSVSVAKGSGD-----PSFDSSAVAAVKNIGRLTEMQGMK 336
Query: 253 PSTYKSWRNITLFFVPSKM 271
PS + +R+ + F P +
Sbjct: 337 PSDFAPYRSFKMTFTPEDL 355
>gi|194333402|ref|YP_002015262.1| TonB family protein [Prosthecochloris aestuarii DSM 271]
gi|194311220|gb|ACF45615.1| TonB family protein [Prosthecochloris aestuarii DSM 271]
Length = 220
Score = 54.5 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/197 (13%), Positives = 52/197 (26%), Gaps = 11/197 (5%)
Query: 70 ENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKIS 129
+ SV + + + + + + +P K+
Sbjct: 26 PDKEVKQSVPTVPLSVTLARISQTDCQPARSRQADQTTHQQENRESKAVPEKVRQKKAAP 85
Query: 130 KATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIAN 189
Q + D + K + SS ++ +R+R+
Sbjct: 86 PEKTIRTPRQEPRQEQHDDHDAHASVEQSAKTSQKEQASSHAHDL---FLSKIRSRIEHQ 142
Query: 190 WNIPSDFKR-FKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQA 248
P KR + V + + G + + G L A +AV K+
Sbjct: 143 KYYPRMAKRLSHEGVVHLKLVIAANGSIAELKLLMSSG-----YSSLDNAALEAVKKAAP 197
Query: 249 FRLSPSTYKSWRNITLF 265
F Y ++I L
Sbjct: 198 FPDP-QGYDR-KDIALT 212
>gi|198429473|ref|XP_002123658.1| PREDICTED: similar to transmembrane agrin [Ciona intestinalis]
Length = 2114
Score = 54.5 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 12/139 (8%), Positives = 25/139 (17%), Gaps = 25/139 (17%)
Query: 24 NFNVQLLVPISRREMLSVDN-----IYNEDYHSSKYKKIEEPVVQFK------------- 65
N + PI R ++ V + EP K
Sbjct: 1088 NLEPLVEGPIVRPPLVPVTIETTRMVQITTTTHPVPVVEPEPTPNAKPEPEPTSKPEPEP 1147
Query: 66 -------GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRM 118
+ + + T E + +
Sbjct: 1148 EPTPNAKPEPTPKSEPEPEPTSKPEPEPEPTSNPEPEPTPNAKPEPTSNPEPEPERTTKT 1207
Query: 119 PVSPYDKQKISKATNKEQD 137
P+ P + + +
Sbjct: 1208 PLVPKSEPETLATSKATPA 1226
>gi|257091929|ref|YP_003165570.1| TonB family protein [Candidatus Accumulibacter phosphatis clade IIA
str. UW-1]
gi|257044453|gb|ACV33641.1| TonB family protein [Candidatus Accumulibacter phosphatis clade IIA
str. UW-1]
Length = 294
Score = 54.1 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/229 (11%), Positives = 63/229 (27%), Gaps = 20/229 (8%)
Query: 25 FNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDR 84
F + L + + + + G + E R + R
Sbjct: 37 FTFPDAARAFQDRALDIILVNSRSARKPSEAQALAQANLDGGGNSEEKRRAKTPLPPAPR 96
Query: 85 FSD--------QTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQ 136
D + ++ + ++ ++ + +A ++ P +
Sbjct: 97 HQDGDDLDHSQKRIQELEAHQQRLAAQTRSRTTVAPAADKQVQPEPTPSVSGRDLAHSAL 156
Query: 137 DLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIA--NWNIPS 194
+ + K +D RP KK + ++ ++ R +V N P
Sbjct: 157 AMARLEGEIAKEVDDYNQRPRKKFIGTRADEYRFA-----QYNEEWRLKVERVGTLNYPE 211
Query: 195 DFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAV 243
+ + + + G V G ++L + AR+ V
Sbjct: 212 AARGKLYGSLILTVSIRSDGTVASVEINRSSG-----HKVLDDAARRIV 255
>gi|251793269|ref|YP_003007997.1| protein TonB [Aggregatibacter aphrophilus NJ8700]
gi|247534664|gb|ACS97910.1| protein TonB [Aggregatibacter aphrophilus NJ8700]
Length = 252
Score = 54.1 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/252 (9%), Positives = 62/252 (24%), Gaps = 23/252 (9%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
+S+++H + LL+++ + +S +I +
Sbjct: 10 SFLLSVVIHATIIFLLFWS-----------------HLSKTDTSANSATGEISTSISMEM 52
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
+ ++ + +T T E + P +
Sbjct: 53 IMAMVEAEPPPVEEKAPEPEKQETVEDPTVKPEPPKVEKPKEPEKPKEKPKEKPKQKPKE 112
Query: 126 QKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNR 185
+ K + + + + +R
Sbjct: 113 KPKVKPNPDVPIGDRTVESNSSVNSKATTTGPATTTNPNLAGNGVGGSELDAYRSALRRE 172
Query: 186 VIANWNIPSDFK-RFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVI 244
+ + P+ K K+ V + F + G + G G + L A AV
Sbjct: 173 IEKHKRYPARAKMMRKQGIVTVSFSIGADGSISGASIAKSSGAED-----LDNAALSAVN 227
Query: 245 KSQAFRLSPSTY 256
+++ P+
Sbjct: 228 SARSIGPRPAGM 239
>gi|254293839|ref|YP_003059862.1| TonB family protein [Hirschia baltica ATCC 49814]
gi|254042370|gb|ACT59165.1| TonB family protein [Hirschia baltica ATCC 49814]
Length = 293
Score = 54.1 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 20/240 (8%), Positives = 51/240 (21%), Gaps = 13/240 (5%)
Query: 24 NFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGD 83
N + + + D+ S + + + + E
Sbjct: 47 NSSFNIPHSVEATPSTKADDTEEPTQKSPPPPRKQIKDTKTSIKPPAAKSKPPKPVELKP 106
Query: 84 RFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQ---- 139
T + + E+ S D K + N + +
Sbjct: 107 EIPQDKIAIPKLPATPLPKTKAAVKESVETPPTSKQTSQTDTTKTNDPENAKDAGKTSSS 166
Query: 140 ----GISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSD 195
++ + + + A + + V+ +
Sbjct: 167 AATHKKHPNDETKLAASKAQNFSSAATQSAHRKHNNTAVGNAAESNYKGLVLQHLTRRKK 226
Query: 196 FKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPST 255
+ + F + G + G A K + ++ F L P+
Sbjct: 227 PRATSPGSAFVAFTITHDGQIDAISISKSSGSNR-----FDREALKLIRRASPFPLPPNK 281
>gi|306844655|ref|ZP_07477240.1| TonB family protein [Brucella sp. BO1]
gi|306274827|gb|EFM56597.1| TonB family protein [Brucella sp. BO1]
Length = 308
Score = 54.1 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/224 (10%), Positives = 56/224 (25%), Gaps = 2/224 (0%)
Query: 18 LLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFS 77
+ + L+ P R V + + E + + +
Sbjct: 62 VAAMVVELVPDLVAPAEERVSEEVQPETTTEQPEEVQPEPEPETQPEAKAEPQQVQEPEE 121
Query: 78 VQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQD 137
V + E + + + + + K K K K+ +
Sbjct: 122 VIPDVVEAQKPEVAVPLPVEKPQEKPEEKPKIEPKPEPKKAEKPKPQKPKPEKVKPKKAE 181
Query: 138 LQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFK 197
+ + E S+ + + +++ + N
Sbjct: 182 KAAETREASAPRVDAENGAKLAA-SKRGETSASAGVIWAKWTSRLQSHMARNARFLQGKS 240
Query: 198 RFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARK 241
R + + F ++ G VL G + + L E AR+
Sbjct: 241 RNTRGEAHVAFVIDPSGNVLSARIAVSSGDPAVDQLAL-EAARR 283
>gi|225872182|ref|YP_002753637.1| TonB family protein [Acidobacterium capsulatum ATCC 51196]
gi|225793373|gb|ACO33463.1| TonB family protein [Acidobacterium capsulatum ATCC 51196]
Length = 251
Score = 54.1 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 31/255 (12%), Positives = 71/255 (27%), Gaps = 25/255 (9%)
Query: 7 LAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKG 66
+A+S++LHV L + M + N ++ I+ +V
Sbjct: 1 MALSLLLHVGVLGGITLLIYFMG--------MFHGEEWGN----NAPSGAIQAQLVSSA- 47
Query: 67 SSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALK-ESALLRMPVSPYDK 125
L +D + N ++ A ++ + + + + +
Sbjct: 48 -PTIPLPQDHTPNNNVLATQTPSEAPAIPSKKTETIPPPNAIPIPVKRKIKHPKKKKPHQ 106
Query: 126 QKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNR 185
+ K + + ++ + V + + + ++ +
Sbjct: 107 NAPQRVQEKPRQHRANYGEQRATQIPHSVTGNPTPNNTVSVNGGNFSSRFPYYVNLITAK 166
Query: 186 VIANW---NIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKA 242
V W I K+ V + G V L +A +A
Sbjct: 167 VSGAWYRQEIDPSTPYGSKVSVTFVI--ARDGSVSDIRIDQPSNS-----PTLNSSAVRA 219
Query: 243 VIKSQAFRLSPSTYK 257
V + ++F P YK
Sbjct: 220 VERVESFGPLPYAYK 234
>gi|256030212|ref|ZP_05443826.1| TonB family protein [Brucella pinnipedialis M292/94/1]
Length = 308
Score = 54.1 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/211 (9%), Positives = 51/211 (24%), Gaps = 1/211 (0%)
Query: 18 LLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFS 77
+ + L+ P R V + + E + + +
Sbjct: 62 VAAMVVELVPDLVAPAEERVSEEVQPETTTEQPEEVQPEPEPEPQPEAKAEPQQVQEPEE 121
Query: 78 VQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQD 137
V + E + + +A + ++ K K K K+ +
Sbjct: 122 VIPDVVEAQKPEVAVPLPVEKPQEKPEEKPKAEPKPEPKKVEKLKPQKPKPEKVKPKKAE 181
Query: 138 LQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFK 197
+ + E S+ + + +++ + N
Sbjct: 182 KAAETREASAPRVDADNGAKVAA-SKRGETSASAGVIWAKWTSRLQSHMARNARFLQGKS 240
Query: 198 RFKKLRVKMHFQLNQKGFVLGKINVDVVGGT 228
R + + F ++ G VL G
Sbjct: 241 RNTRGEAHVAFVIDPSGNVLSARIAVSSGDP 271
>gi|146343116|ref|YP_001208164.1| putative energy transducer TonB [Bradyrhizobium sp. ORS278]
gi|146195922|emb|CAL79949.1| putative energy transducer TonB [Bradyrhizobium sp. ORS278]
Length = 262
Score = 54.1 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/197 (10%), Positives = 58/197 (29%), Gaps = 7/197 (3%)
Query: 61 VVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPV 120
++ E+ + + + E + + K + +E+ +
Sbjct: 53 ALEMASPQVEDNDLPPGPDSDAAEAAPEQMQQTAEVKESDAVKDKPTETEEEADRVVTQN 112
Query: 121 SPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIA 180
P +K + ++Q ++ A ++ + + + Q
Sbjct: 113 EPKKPEKEEQQQAQQQAEASVASAAQQESARKALDEAAPPAETAKAPNVGLGKDRQKLTD 172
Query: 181 IVRNRVIANWNIPSDFKRFK--KLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLREN 238
++ A + + + K VK+ L++ G V+ + G M +
Sbjct: 173 NWGRKISAYFELHKRYPEGKKHNGTVKVALVLSRAGKVMSASVMQSCGD-----PMFDDA 227
Query: 239 ARKAVIKSQAFRLSPST 255
A + +S P+
Sbjct: 228 ALAMIRRSDPVPAPPAG 244
>gi|326317714|ref|YP_004235386.1| protein TolA [Acidovorax avenae subsp. avenae ATCC 19860]
gi|323374550|gb|ADX46819.1| protein TolA [Acidovorax avenae subsp. avenae ATCC 19860]
Length = 341
Score = 54.1 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/214 (11%), Positives = 67/214 (31%), Gaps = 8/214 (3%)
Query: 57 IEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALL 116
E Q + +E ++ + +E + + + + ++ K + + L
Sbjct: 136 ERERKEQAEQEKKERQQKEKAQREKDQQQQREKEQREKDRREQQEKLEKQQAEKERQEQL 195
Query: 117 RMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQ 176
+ + ++ K D + + ++++ + + + R PS
Sbjct: 196 QKKQAEDKRKADEKRKADAADAKRLEALRQENLRRMQGLAGATGGETATGNAQRSSGPSG 255
Query: 177 DAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLR 236
V +V N P LR ++ + + G ++G G +
Sbjct: 256 SYGGKVAAKVRPNIVYPDAISD--NLRTEVEVRASPDGTIVGIRVTKSSGN-----KSWD 308
Query: 237 ENARKAVIKSQAFRLSPSTYKSWRNITLFFVPSK 270
+ +A+ K+ + ++ + F P
Sbjct: 309 DAVVRALEKTDTLPRDVDG-RVPSSLVIGFRPKD 341
>gi|149375116|ref|ZP_01892888.1| TolA family protein [Marinobacter algicola DG893]
gi|149360480|gb|EDM48932.1| TolA family protein [Marinobacter algicola DG893]
Length = 324
Score = 54.1 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 42/330 (12%), Positives = 94/330 (28%), Gaps = 72/330 (21%)
Query: 7 LAISMILHVMFLLLLYFNFNVQ-----------------LLVPISRREMLSVDNIYNEDY 49
+A+S++LH + L + + P VD ++
Sbjct: 1 MALSILLHGLILGVALAGWTWTDPSEDPPPPSISARLITPNEPEPSPVTEPVDEPDRDEE 60
Query: 50 HSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQA 109
+ +K + + + + +E + + + + E +R K E+A
Sbjct: 61 RRQEEEKERKEEAERRKAEEEREREEARRIQQEKEQKLEQQRQEEAAEREREQQRKAEEA 120
Query: 110 LKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDK----------- 158
++ A K + K +E + + ++
Sbjct: 121 ARQKAAAEAKERERQKAEEEKRRQEEAARKAAEEKRRAEEQRKKEEAEQKAREERERQEA 180
Query: 159 ----------------------------------KELLSKVEKSSRKRIPSQDAIAIVRN 184
+E + + S+ SQ A++R
Sbjct: 181 ERKRKERERRLKEQQLEALAEEAQQEREAEERRKREAAAAKARESQMLSESQKYQALIRE 240
Query: 185 RVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVI 244
R+ W PS +++ ++ L G + V G T +A AV
Sbjct: 241 RLSQAWYPPSSA--TEEMTARLQITLLPTGELASVKLVSTSGNT-----AFDNSALGAVK 293
Query: 245 KSQAFRLS--PSTYKS-WRNITLFFVPSKM 271
+ + T++ +R T+ F P ++
Sbjct: 294 SLNRYPIPDDRDTFEKYFRQFTIEFNPRRL 323
>gi|149377077|ref|ZP_01894827.1| hypothetical protein MDG893_11869 [Marinobacter algicola DG893]
gi|149358613|gb|EDM47085.1| hypothetical protein MDG893_11869 [Marinobacter algicola DG893]
Length = 248
Score = 54.1 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/275 (7%), Positives = 69/275 (25%), Gaps = 46/275 (16%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPV 61
R+ ++++++LH + S R+ + V+ + +
Sbjct: 15 RITLAISVALLLHTLV----MATLPFTAPKMESHRQTVEVELVRPGSVPLPESAASATSP 70
Query: 62 VQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVS 121
+ + + + ++ + + + + +
Sbjct: 71 NNDQRDESITVKSSQVDTNHPRNKAPTVRSTPSSHTPVVEPQPPTRKTPSRDSASTTAGT 130
Query: 122 PYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAI 181
P + + + + + +A
Sbjct: 131 PEKPVEKTPER--------------------------------ITRIASSPGDVDPYMAS 158
Query: 182 VRNRVIANWN---IPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLREN 238
+ + +PS ++ ++ +L Q G + G G + +
Sbjct: 159 LAVHIGKELGKRPVPSSHSVTTQVTSQVELRLLQSGALTGAKVTKSTGFND-----IDRA 213
Query: 239 ARKAVIKSQAFRLSPSTYKSWRNI--TLFFVPSKM 271
+A + + + P Y + L F P ++
Sbjct: 214 IYQAALLASPYPEPPEEYSGRKRFRVELIFSPERL 248
>gi|124515832|gb|EAY57341.1| putative TonB protein [Leptospirillum rubarum]
Length = 367
Score = 54.1 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 31/223 (13%), Positives = 70/223 (31%), Gaps = 15/223 (6%)
Query: 52 SKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALK 111
K K E + E D + + T +++ + Q
Sbjct: 137 PKVAKAPETAPKPVSKPHEARSSDLPGFRQVKKNVSSHRRETTAQRSEQVHPKQKTQKTA 196
Query: 112 ESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRK 171
E + K+ ++ Q Q +S A + T + + + ++S+
Sbjct: 197 EVKPVPKTTPSPKKKPAMTTISRSQMQQILSQAALGTPFTHHLNLAQDMAPAYSDRSNDL 256
Query: 172 RIPSQD--------AIAIVRNRVIANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKINV 222
+ + I ++ R P + ++ R + F +N+ G +
Sbjct: 257 NRIAANLEDETYSSYIKRIQERFETIGEYPVEAQQRGITGRALVTFVINEDGTLAAARLT 316
Query: 223 DVVGGTELVRRMLRENARKAVIKSQAFRLSPSTYKSWRNITLF 265
+ G R+L E A + V + + P ++ + +TL
Sbjct: 317 ESSGS-----RILDEEALRIVRVAAPYIPLPKSFHK-KELTLT 353
>gi|332305763|ref|YP_004433614.1| protein TolA [Glaciecola agarilytica 4H-3-7+YE-5]
gi|332173092|gb|AEE22346.1| protein TolA [Glaciecola agarilytica 4H-3-7+YE-5]
Length = 298
Score = 54.1 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 43/304 (14%), Positives = 100/304 (32%), Gaps = 46/304 (15%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRR-------EMLSVDNIYNEDYHSSKY 54
++ L SM LH+ F +L++ + +L + E ++VD E+
Sbjct: 4 QMPIPLIKSMSLHLAFGVLIFAGMDFKLPQESTEMTISQPVIEAVAVDTNAVEEQVKRIE 63
Query: 55 KKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQA----- 109
+ + + E R + + + N+ +R K EQA
Sbjct: 64 DQKKRKQKAEEDRIAELERRANEAERKRKQQEQEAVEIEQRNKRQREERKKAEQAAIAAR 123
Query: 110 ----------------------LKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKK 147
++ A + + ++K KA + Q + + + +
Sbjct: 124 KKQEQEKAKAKAAEAERKRKELERKKAEEQAKKAKEAREKEEKALKEAQRKKAEAAEKAR 183
Query: 148 SIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMH 207
+ + + ++ + + +S + Q A++ + + + K +++
Sbjct: 184 QERALQDQLEAEQAVRQQRRSKQVLTEVQKYQALIHQAIQRQLIVDNSMKGK---SCQLN 240
Query: 208 FQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLS--PSTYKSWRNITLF 265
+L G V+ + +L A+ AV K+ +S Y+ R+I L
Sbjct: 241 VRLASSGLVIQVKEL-------GGDPILCRAAKSAVFKAGTLPVSKEADVYEKLRDINLT 293
Query: 266 FVPS 269
P
Sbjct: 294 VEPE 297
>gi|190893092|ref|YP_001979634.1| membrane protein, transduces energy to outer membrane receptors
[Rhizobium etli CIAT 652]
gi|190698371|gb|ACE92456.1| putative membrane protein, transduces energy to outer membrane
receptors [Rhizobium etli CIAT 652]
Length = 440
Score = 53.8 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 17/196 (8%), Positives = 44/196 (22%), Gaps = 7/196 (3%)
Query: 34 SRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHA 93
+ + V E + + + +E +
Sbjct: 216 TAEPEVLVSETSAETSVAQPMSTVVPEQLVISSEPPTAAAIQSESEEIKPVEAAPVSPEP 275
Query: 94 TENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVV 153
K + + P K + S+ K++ +G + +
Sbjct: 276 EPPTEVVIPQKKPKLEKPVEKKVVDRKQPPKKTQGSEGDAKQESRRGAADGQ-------A 328
Query: 154 VRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQK 213
+ K + V +R+ + R + +++ +N
Sbjct: 329 DANSDNNSRTSGGKEGAGGASQANYTGKVFSRLSRCIDRLKSQYRDTAVSLRVRVMVNSD 388
Query: 214 GFVLGKINVDVVGGTE 229
G V G +
Sbjct: 389 GNVTLSRITSGSGMAD 404
>gi|310816634|ref|YP_003964598.1| C-terminal TonB protein [Ketogulonicigenium vulgare Y25]
gi|308755369|gb|ADO43298.1| C-terminal TonB protein [Ketogulonicigenium vulgare Y25]
Length = 349
Score = 53.8 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 20/228 (8%), Positives = 55/228 (24%), Gaps = 6/228 (2%)
Query: 28 QLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSD 87
+ +D ++ + +++ ++ L V
Sbjct: 111 LAPETPDQAPQQEIDAPVPDEPIPDEIREVPPEILPEAPPEDLPLEPPPEVPPEPLDEEP 170
Query: 88 QTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKK 147
+ E E+ L + + + + ++ +
Sbjct: 171 PEELPPAAPPPDPDPIEVEELPEVETPALALSPPSRPQNLRTAPPPPPPQQRAMASTQSA 230
Query: 148 SIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRF-KKLRVKM 206
+ R + V I Q V V P++ + ++ +
Sbjct: 231 PREVEAPRANTATATQNVTSQQVPNISPQQWQDRVNTHVNRFITYPAEARAARQQGTPLI 290
Query: 207 HFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPS 254
L+ G V+ G +L + A ++ + P+
Sbjct: 291 RITLDDAGNVISASLARSSG-----YTLLDQAAVAMAYRASPLPVPPA 333
>gi|78358670|ref|YP_390119.1| TonB-like [Desulfovibrio desulfuricans subsp. desulfuricans str.
G20]
gi|78221075|gb|ABB40424.1| Cell division and transport-associated protein TolA [Desulfovibrio
desulfuricans subsp. desulfuricans str. G20]
Length = 332
Score = 53.8 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 27/184 (14%), Positives = 54/184 (29%), Gaps = 8/184 (4%)
Query: 88 QTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKK 147
Q K + + S + + A V D ++ ++ L+ +
Sbjct: 156 QEKPKPQPPKKAPAQPSADDILKQALAETSATVKKQDTRQRDVLLDELASLRAEVSSRSD 215
Query: 148 SIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMH 207
T + + + + A+V+ RV NW P +R L +
Sbjct: 216 GQGTGNEAGGTADDGQGGRQDGQGLGLADIYSALVKERVQQNWRFPQLAERV-NLITVLR 274
Query: 208 FQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPSTYKSWRNITLFFV 267
+L G +L G + +A AV + P +++ + F
Sbjct: 275 IRLAPDGSLLDVSVETPSGRPD-----YDSSAVNAVHATDDLPPPPV--PELQDLRITFN 327
Query: 268 PSKM 271
M
Sbjct: 328 LQDM 331
Score = 36.0 bits (81), Expect = 5.2, Method: Composition-based stats.
Identities = 19/211 (9%), Positives = 49/211 (23%), Gaps = 5/211 (2%)
Query: 8 AISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNED----YHSSKYKKIEEPVVQ 63
IS++LH ++ + + L + V+ + P
Sbjct: 7 LISLLLHCAVVVAALY-WPASALKVRLDVPVYKVNLVSLSATVKHGQPKPGTPKPAPSSS 65
Query: 64 FKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPY 123
+ + + Q + + + + + Q
Sbjct: 66 VAKAPSSGVAQPVPPQPKAVPKTQKLPEPVKKPQPAPPKPAPAPQDAAALPKAPEKPKKP 125
Query: 124 DKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVR 183
+++ + K + +K + V K + K + A+A
Sbjct: 126 EEKPKPEPEKKPEKKTAPEPEKKPEPEKKVQEKPKPQPPKKAPAQPSADDILKQALAETS 185
Query: 184 NRVIANWNIPSDFKRFKKLRVKMHFQLNQKG 214
V D + ++ G
Sbjct: 186 ATVKKQDTRQRDVLLDELASLRAEVSSRSDG 216
>gi|91977797|ref|YP_570456.1| TonB-like [Rhodopseudomonas palustris BisB5]
gi|91684253|gb|ABE40555.1| TonB-like [Rhodopseudomonas palustris BisB5]
Length = 264
Score = 53.8 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 18/190 (9%), Positives = 52/190 (27%), Gaps = 6/190 (3%)
Query: 64 FKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPY 123
+L + + + + + + + P P
Sbjct: 59 SPKHEASDLPPGPETDASAASPALNEQKAEVKQSDLPKDTPQQTEEADRIVTTEQPKKPD 118
Query: 124 DKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVR 183
++QK ++ + ++ + + + + +
Sbjct: 119 EEQKEKAVVRQQASTESVAAEATAMPSNETAKEGPRSVAPAQGVGQAAQRIRATWQKELV 178
Query: 184 NRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAV 243
+ + P + + K +++ + F+L++ G VL V+ G + A V
Sbjct: 179 AYLDKHKRYPKEGAQ-KNVKIVVSFELDRLGHVLSTRIVEGSGDA-----AFDQAALDMV 232
Query: 244 IKSQAFRLSP 253
+S P
Sbjct: 233 RRSDPVPAPP 242
>gi|171463098|ref|YP_001797211.1| protein TolA [Polynucleobacter necessarius subsp. necessarius
STIR1]
gi|171192636|gb|ACB43597.1| protein TolA [Polynucleobacter necessarius subsp. necessarius
STIR1]
Length = 275
Score = 53.8 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 31/267 (11%), Positives = 70/267 (26%), Gaps = 17/267 (6%)
Query: 4 ENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQ 63
+ S+I H+ L L + S + V+ + + K
Sbjct: 26 KRAFTFSLIAHLGLLAFLMIGISWN----NSTSSGVEVEPWDSAPQVETPPKP------- 74
Query: 64 FKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPY 123
+ + + V D ++++ K + + K + KE + +P
Sbjct: 75 ERKTEMKEEVADIAIKKKKVEKEPPKKEVKETPKAAKPLPPKEKAKEKEPEKPKKAEAPK 134
Query: 124 DKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVR 183
+ S A K + A++ + + + V
Sbjct: 135 KAEAKSPAETKANAAAEKARADQLARLRAAAGAEGGSGGTAGSGVGGGGNTPPGWTDKVI 194
Query: 184 NRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAV 243
+V + L + L G +L + G A+
Sbjct: 195 KKVKPLIVFNPESV-SGNLAAVVLVNLAPDGAILSTKMLSSSGNAG-----YDRAVLLAL 248
Query: 244 IKSQAFRLSPSTYKSWRNITLFFVPSK 270
++++ + R + L F P
Sbjct: 249 TRAESLPKDDNGKIPQREVKLTFKPKD 275
>gi|46201442|ref|ZP_00208103.1| hypothetical protein Magn03009721 [Magnetospirillum magnetotacticum
MS-1]
Length = 250
Score = 53.8 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 27/219 (12%), Positives = 60/219 (27%), Gaps = 17/219 (7%)
Query: 65 KGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYD 124
E + + E + E + ++ +
Sbjct: 37 IPERTERSMEVEVIPEPLKPEPPKPVAPPPPQEPPLPETPPEAPKVQTAPPPPPLPIQRP 96
Query: 125 KQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRN 184
+ + + K + + + + SQ+ V
Sbjct: 97 QLQPAPLAEKSKAPKSEPAKPALQSPGLSTDTGTFTRSAPAAGE-----LSQNIQDKVLA 151
Query: 185 RVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRR----------- 233
+V+ W+ S R + + +N+ G + G ++ D + R
Sbjct: 152 QVVRMWHFNSAALRGSDIILSASLLVNRDGTLSGPMHKDAPWNPDAAIRGYSRLPEGTTK 211
Query: 234 MLRENARKAVIKSQAFRLSPSTYKSW-RNITLFFVPSKM 271
+ E A+ +Q +L P K W R++ L F P +
Sbjct: 212 QMMETFLVALRMAQPLQLPPDDGKPWPRHMMLRFKPGDL 250
>gi|90426013|ref|YP_534383.1| TonB-like [Rhodopseudomonas palustris BisB18]
gi|90108027|gb|ABD90064.1| TonB-like [Rhodopseudomonas palustris BisB18]
Length = 265
Score = 53.8 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 21/222 (9%), Positives = 60/222 (27%), Gaps = 20/222 (9%)
Query: 34 SRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHA 93
++ + ++D + + + P + + + + + D+
Sbjct: 45 TQDSVTAIDVDFTTESFKDSQARDVAPGEEQMQTDAAPPPMEKAELKAEDKTEPVKDPQP 104
Query: 94 TENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVV 153
T +E + + + A E+ + + +
Sbjct: 105 TPDEPIATPPLPAVAEPDVA--------------LDTAAPPEKKKEEEKKDDAEKTPNAA 150
Query: 154 VRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDF-KRFKKLRVKMHFQLNQ 212
+ S+ + + + N P D R + K+ F +++
Sbjct: 151 PPVVAASATTAPTASAARTAMLVSWKRQLALHLQRNKRYPPDAQARRESGVAKVSFVVDR 210
Query: 213 KGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPS 254
+G V+ V G L + ++Q + P+
Sbjct: 211 QGRVMSSSIVKGSGS-----EALDRETLALLQRAQPLPVPPA 247
>gi|332188265|ref|ZP_08389993.1| hypothetical protein SUS17_3371 [Sphingomonas sp. S17]
gi|332011764|gb|EGI53841.1| hypothetical protein SUS17_3371 [Sphingomonas sp. S17]
Length = 343
Score = 53.8 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 25/161 (15%), Positives = 45/161 (27%), Gaps = 12/161 (7%)
Query: 113 SALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKR 172
P +P Q S + + + P K E +
Sbjct: 180 KPSASRPTTPARGQGNSATATAAKPRGSRLGNDFLKGLSPDPSPSKSEAAPATKI---GA 236
Query: 173 IPSQDAIAIVRNRVIANWNIP-SDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGG---- 227
+ + + +V N + +++RV M+ +LN+ G + V G
Sbjct: 237 QQLANIASAILRQVQPCANRQVTPGPGAERIRVTMNLKLNRDGSLAAAPRVVGHSGVDGE 296
Query: 228 TELVRRMLRENARKAVIKSQAFR-LSPSTYK---SWRNITL 264
+ + + A R L Y W N TL
Sbjct: 297 NDRYVDRVDDLAIATFKGCSPLRGLPAELYDVPGGWSNFTL 337
Score = 36.0 bits (81), Expect = 6.0, Method: Composition-based stats.
Identities = 11/70 (15%), Positives = 31/70 (44%), Gaps = 3/70 (4%)
Query: 4 ENGLAISMILHVMFLLLLYFNF---NVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP 60
GLAI++ H++ LL F + ++ ++ V ++ E + ++ +
Sbjct: 6 RTGLAIAVAGHIVLFGLLSVGFLATPNPEKLKVTPIDISLVKDVGLEAESPTPNQQPAQS 65
Query: 61 VVQFKGSSQE 70
+ +G+ ++
Sbjct: 66 IAPEEGAPED 75
>gi|330959270|gb|EGH59530.1| TonB [Pseudomonas syringae pv. maculicola str. ES4326]
Length = 356
Score = 53.8 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 27/213 (12%), Positives = 59/213 (27%), Gaps = 11/213 (5%)
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
K ++ L + + + + + E K + + +
Sbjct: 149 DAKKVEEKQLADIAKKKAEDEAKKKAEEDAKKAAAEEAKKQAADEAKKKAAEDAKKKAAE 208
Query: 123 YDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIV 182
K+K + + K+ AE K + K + R + ++
Sbjct: 209 DAKKKAAADSAKKAQEAARKSAEDKKAQALADLLSDKPERQQALADERGDETAGSFDDLI 268
Query: 183 RNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKA 242
R R W+ P + + V + + G + G +A A
Sbjct: 269 RVRASEGWSRPPSAR--NNMSVTLQIGMLPDGTIASVSIAKSSGDG-----PFDSSAVAA 321
Query: 243 VIKSQAFR----LSPSTYKSWRNITLFFVPSKM 271
V L P+ + +R+ + F P +
Sbjct: 322 VKNIGRLTEMQGLKPADFAPYRSFKMTFTPGDL 354
>gi|148264129|ref|YP_001230835.1| hypothetical protein Gura_2072 [Geobacter uraniireducens Rf4]
gi|146397629|gb|ABQ26262.1| hypothetical protein Gura_2072 [Geobacter uraniireducens Rf4]
Length = 246
Score = 53.8 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 22/170 (12%), Positives = 50/170 (29%), Gaps = 9/170 (5%)
Query: 87 DQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEK 146
T T + EQ S +DK + + +Q+L+ + ++
Sbjct: 66 TAPVTSDTPKTETDVPAPATEQPNPPPPTDLPTTSEFDKLQ----NDLQQNLESVGAKQE 121
Query: 147 KSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKM 206
+ + + + R + + + W I + R V M
Sbjct: 122 TVQQASLGLGITRGFFRSLAEGETLRDDIRMYYFSMLQNINEKWWIDKNIDRKGIREVVM 181
Query: 207 HFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPSTY 256
+ + + G ++ K + G + KA+ + P +Y
Sbjct: 182 NIIVARNGEIVAKQLIRGSGNA-----AYDKEVLKALEAAGPLPPLPESY 226
>gi|254447651|ref|ZP_05061117.1| TonB family protein [gamma proteobacterium HTCC5015]
gi|198262994|gb|EDY87273.1| TonB family protein [gamma proteobacterium HTCC5015]
Length = 294
Score = 53.8 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 26/245 (10%), Positives = 73/245 (29%), Gaps = 22/245 (8%)
Query: 23 FNFNVQLLVPISRREMLSVDNIYNEDY-HSSKYKKIEEPVVQFKGSSQENLVRDFSV--- 78
F+ + I+ L V + + + + Q G + E R
Sbjct: 36 VVFDQEDQAAIAPPPSLEVILVQDNNKDDNPDQADYLAQTNQDGGGTSEQSDRPSKAFTA 95
Query: 79 -----QENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATN 133
++ + + + ++ Q +
Sbjct: 96 VAPNQEKGVAPIPLEAAKPEPQEQNNPIVLTRLHSNHSVDDQPNQETPDTQTQDRRDISE 155
Query: 134 KEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIA--NWN 191
+ + +S + + RP K ++ ++ + +A ++ N N
Sbjct: 156 LDMQIAQMSAELSAAKEAYAKRPKKLQITARTH-----AYIAAPYMARWVEKIERIGNMN 210
Query: 192 IPSDFKRFK-KLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFR 250
+P + +R + + + +L G ++ + G ++L + A++ V + F
Sbjct: 211 LPDEARRNELSGELLLEVELRHTGQLVEVKLISSSG-----HQVLDDAAKRIVALATPFE 265
Query: 251 LSPST 255
+ P+
Sbjct: 266 VFPAK 270
>gi|302337653|ref|YP_003802859.1| TonB family protein [Spirochaeta smaragdinae DSM 11293]
gi|301634838|gb|ADK80265.1| TonB family protein [Spirochaeta smaragdinae DSM 11293]
Length = 260
Score = 53.8 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 32/244 (13%), Positives = 70/244 (28%), Gaps = 25/244 (10%)
Query: 11 MILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQE 70
+ +H + L F+F P ++V E ++ P+
Sbjct: 23 IFVHGLIWGSLDFSFEAAQKEPEP----MTVRFTSLEGLDATPAGNELVPLEGDPVVV-- 76
Query: 71 NLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISK 130
+ R + + +E + S ++ + + +S +
Sbjct: 77 -------PKPQETRIEEPSMPDVAASEIEESPMTEVLETEVKPVESPQRISAKAPETARH 129
Query: 131 ATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANW 190
+ + S A + L + S+ S D AI+ ++
Sbjct: 130 VREEASPAEAASVATVSKSEVGA-----SSALGRDGGSAYGESLSLDYRAIILRQLEGRK 184
Query: 191 NIPSDFKRFKKLR-VKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAF 249
P+ ++ + V + F + G V R LR+ A ++V K+ F
Sbjct: 185 VYPAAARKRGIIGPVTLCFSVAPDGTVSELSVEVAS------HRFLRQAALESVRKAAPF 238
Query: 250 RLSP 253
Sbjct: 239 SFPE 242
>gi|158422884|ref|YP_001524176.1| C-terminal TonB protein [Azorhizobium caulinodans ORS 571]
gi|158329773|dbj|BAF87258.1| C-terminal TonB protein [Azorhizobium caulinodans ORS 571]
Length = 284
Score = 53.4 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 23/245 (9%), Positives = 76/245 (31%), Gaps = 8/245 (3%)
Query: 11 MILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQE 70
+ +H + ++ + + +D S+ + + P Q + +
Sbjct: 29 LAIHGGAVYAG-LKWHKVEGISEPPPAAVMIDLAPLPVAPPSETEDVA-PGPQMVQAPEP 86
Query: 71 NLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISK 130
+++++ + + E + +A+ + P ++K +
Sbjct: 87 VPDAPDTMEDSTPPPTPEVVEEPIEKMPDLPTPPVMAEAVLPPPRPIVQEPPPPQKKPEE 146
Query: 131 ATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANW 190
+++ + + + + SS +++ +
Sbjct: 147 KKPEKKASRRPAAPVTSAAPKLDAPTSNAIAAPSAGASSSASTAPATWRSMIVGHLNRYK 206
Query: 191 NIPSDFKRF-KKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAF 249
PS+ + ++ ++ F +++ G V+G G +L E + V ++ F
Sbjct: 207 RYPSEARAKREEGTARLRFTIDRAGRVIGASLAGTSGHA-----LLDEETLEMVRRASPF 261
Query: 250 RLSPS 254
P+
Sbjct: 262 PAPPA 266
>gi|292490366|ref|YP_003525805.1| TonB family protein [Nitrosococcus halophilus Nc4]
gi|291578961|gb|ADE13418.1| TonB family protein [Nitrosococcus halophilus Nc4]
Length = 303
Score = 53.4 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 27/254 (10%), Positives = 64/254 (25%), Gaps = 23/254 (9%)
Query: 19 LLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSV 78
+L N+ L + + + + + GS +E +
Sbjct: 30 ILSIGQLNILPPPTPVHSPPLEIVLVPIKQEQAPEKPDFLAQANHIGGSLKEKQPPRPTP 89
Query: 79 QENGDRFSD-QTKTHATENETKRSSSSKGEQALKE------------SALLRMPVSPYDK 125
QT ++ T + + + K + S + S +
Sbjct: 90 PSPPPASKPLQTASNGTTQPSGATLTEKKLPPPEPVTTPSVLTQKHASRPVTQQASEPEP 149
Query: 126 QKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEK--SSRKRIPSQDAIAIVR 183
+ + + + + SS K + + R
Sbjct: 150 LDTVEVEDSPKPRPSARELIAALEGQLAKEIQGYANQPRKRHIDSSTKEYAATAYLDAWR 209
Query: 184 NRVIANWNIPSDFKRFKK---LRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENAR 240
++ + + ++ + + LN G V + G ++L E A
Sbjct: 210 KKIERVGKMNYPEEAKRQGLSGSLILVVDLNVDGSVANIVVRRSSG-----YQILDEAAI 264
Query: 241 KAVIKSQAFRLSPS 254
+ V + F P
Sbjct: 265 RIVRLAAPFAKVPE 278
>gi|77360810|ref|YP_340385.1| TolA protein [Pseudoalteromonas haloplanktis TAC125]
gi|76875721|emb|CAI86942.1| putative TolA protein [Pseudoalteromonas haloplanktis TAC125]
Length = 301
Score = 53.4 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 41/310 (13%), Positives = 93/310 (30%), Gaps = 53/310 (17%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISR--------------REMLSVDNIYNED 48
++ L S++LHV LY N+ P ++VD E
Sbjct: 1 MQTPLIKSVLLHVALGGFLYATANIHPPAPKVMEVTLNSAIPDVDKAVSAVTVDQKQVEQ 60
Query: 49 YHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQ 108
+ KK ++ ++ R + ++ + + Q K + + K +++ +
Sbjct: 61 KIAQLRKKEDDQKRAEDKRIRDLERRASNARKERESEARQIKKLEQQRKAKEKETAEAQA 120
Query: 109 ALKESALLRMPVSPYDK---------------------------QKISKATNKEQDLQGI 141
K++ + K +K K +
Sbjct: 121 QAKKARAIEQQERAKAKQAEKQKQESENAAKAAADKRKAEEDALKKAQAERKKREAEAER 180
Query: 142 SFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKK 201
+ + + K++ + + A++ R+ N I K
Sbjct: 181 KREQAMQEQMLQEQLAKEQAARSKIRQQQVVSEVDKYRALIMARIQQNLLIDEKM---KN 237
Query: 202 LRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPST--YKSW 259
+ +++ +L G V ++ R++ E A +AV + +S +
Sbjct: 238 QQCRVNIRLGFNGLVTQVTSL-------GGDRLVCEAALRAVRMADTLPVSKDKDVFDQL 290
Query: 260 RNITLFFVPS 269
+NI L P
Sbjct: 291 KNINLTIKPE 300
>gi|207744077|ref|YP_002260469.1| hypothetical protein (partial sequence c terminus) [Ralstonia
solanacearum IPO1609]
gi|206595481|emb|CAQ62408.1| hypothetical protein (partial sequence c terminus) [Ralstonia
solanacearum IPO1609]
Length = 127
Score = 53.4 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 17/93 (18%), Positives = 29/93 (31%), Gaps = 7/93 (7%)
Query: 178 AIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRE 237
VR +V N + + Q+ G +L + G E
Sbjct: 42 YADRVRAKVKPNIVFDPEAV-SGNPSAVVSVQMAPDGSILSRRLTKSSGNG-----AYDE 95
Query: 238 NARKAVIKSQAFRLSPSTYKSWRNITLFFVPSK 270
+AV +S S K+ ++ L F P +
Sbjct: 96 AVLRAVDRSDPLPRDTSG-KAPSSVILTFRPKE 127
>gi|319941770|ref|ZP_08016092.1| hypothetical protein HMPREF9464_01311 [Sutterella wadsworthensis
3_1_45B]
gi|319804703|gb|EFW01570.1| hypothetical protein HMPREF9464_01311 [Sutterella wadsworthensis
3_1_45B]
Length = 420
Score = 53.4 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 22/226 (9%), Positives = 57/226 (25%), Gaps = 5/226 (2%)
Query: 46 NEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSK 105
+ ++ + + + +++ + + + + + +
Sbjct: 194 LAEQAKRAEEERQAEEARRQEAARLAEEARKAEEAKKAEEERRAAEAEAKRIAEELKREE 253
Query: 106 GEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKV 165
E+ +E+A + + +K +Q + ID R +
Sbjct: 254 AERQAQEAAQKAAAERQAREAEQAKRRIAQQARERELARLAAKIDPNAQRSGTTRGDQRN 313
Query: 166 EKSSRKRIPSQDAIAIVRNRVIANWNIPSDFK-RFKKLRVKMHFQLNQKGFVLGKINVDV 224
+ S VR + N + + +L G +G +
Sbjct: 314 FRRSLTGSALATWSNRVRACIRPNILFDVPVNTPRGRYVAEYQVRLQSDGKQIGSPELKK 373
Query: 225 VGGTELVRRMLRENARKAVIKSQAFRLSPSTYKSWRNITLFFVPSK 270
G N +A+ F +T+ F P
Sbjct: 374 SSGLS----AYDTNVLRAIRLCNPFPQPTGGEAIPSVLTITFDPVD 415
Score = 48.0 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 20/179 (11%), Positives = 47/179 (26%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
+ +S+ +H + L+ F E+ + + I + S +K+ E
Sbjct: 21 MFPAALLSVAVHGALFVGLFTAFQWNTSEEAVYAELWAPEEISGGNDPSGVAEKLPEVKS 80
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
+ QE + A + E E +
Sbjct: 81 KDTEEQQEQKAAAPEPNPPAEPPPTAQPEPAQPTPEDIAREKAQEAQRIEEEQIARAAQE 140
Query: 123 YDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAI 181
+ + +A Q+ E+ + + + ++ E+ R A
Sbjct: 141 ELEARRQEAERIAQERARAEEIERMRQEAIEAEQRRLAEEARREEEERIAQERLAEQAK 199
>gi|163746895|ref|ZP_02154252.1| TonB family protein [Oceanibulbus indolifex HEL-45]
gi|161380009|gb|EDQ04421.1| TonB family protein [Oceanibulbus indolifex HEL-45]
Length = 281
Score = 53.4 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 29/266 (10%), Positives = 67/266 (25%), Gaps = 14/266 (5%)
Query: 5 NGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQF 64
+ +S LH L + + + E + D
Sbjct: 17 AAIVLSGALHA---GLPVLLLDHDAVDKRAEPEADGITGAMMFDLSDIIAAPSALQEDSV 73
Query: 65 KGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYD 124
+ E + + ++ + S +
Sbjct: 74 AQVEAQEAPTVTESPEVLEAAKAAEQPILSQIPYEVEDESLKFGVAAPKPDAETEEVAEE 133
Query: 125 KQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRN 184
+ + Q + + S +V + + +S + I +
Sbjct: 134 VATEQDPEQIDAESQVGAEDLQASEQSVAGVEAETVAETAKAESEGLTAEQTEEIREWQK 193
Query: 185 ----RVIANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENA 239
+ P+ + K + V++ F L++ G +L G +L A
Sbjct: 194 SIVLLISGAKTYPAKARSDKIEGEVQVRFTLDRYGAILSAEVAQSSGSD-----VLDRAA 248
Query: 240 RKAVIKSQAFRLSPSTYKSWRNITLF 265
+ V K + P+ Y + + TL
Sbjct: 249 VQTVEKLEKMPTPPN-YLTGKEFTLI 273
>gi|28871118|ref|NP_793737.1| tolA protein [Pseudomonas syringae pv. tomato str. DC3000]
gi|301384815|ref|ZP_07233233.1| TonB, C-terminal [Pseudomonas syringae pv. tomato Max13]
gi|302063531|ref|ZP_07255072.1| TonB, C-terminal [Pseudomonas syringae pv. tomato K40]
gi|302130605|ref|ZP_07256595.1| TonB, C-terminal [Pseudomonas syringae pv. tomato NCPPB 1108]
gi|28854368|gb|AAO57432.1| tolA protein [Pseudomonas syringae pv. tomato str. DC3000]
gi|330872648|gb|EGH06797.1| TonB [Pseudomonas syringae pv. morsprunorum str. M302280PT]
gi|331016444|gb|EGH96500.1| TonB [Pseudomonas syringae pv. lachrymans str. M302278PT]
Length = 356
Score = 53.4 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 27/213 (12%), Positives = 59/213 (27%), Gaps = 11/213 (5%)
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
K ++ L + + + + + E K + + +
Sbjct: 149 DAKKVEEKQLADIAKKKAEDEAKKKAEEDAKKAAAEEAKKQAADEAKKKAAEDAKKKAAE 208
Query: 123 YDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIV 182
K+K + + K+ AE K + K + R + ++
Sbjct: 209 DAKKKAAADSAKKAQEAARKSAEDKKAQALADLLSDKPERQQALADERGDETAGSFDDLI 268
Query: 183 RNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKA 242
R R W+ P + + V + + G + G +A A
Sbjct: 269 RVRASEGWSRPPSAR--NNMSVTLQIGMLPDGTIASVSIAKSSGDG-----PFDSSAVAA 321
Query: 243 VIKSQAFR----LSPSTYKSWRNITLFFVPSKM 271
V L P+ + +R+ + F P +
Sbjct: 322 VKNIGRLTEMQGLKPADFAPYRSFKMTFTPGDL 354
>gi|71734372|ref|YP_275908.1| tolA protein [Pseudomonas syringae pv. phaseolicola 1448A]
gi|71554925|gb|AAZ34136.1| tolA protein [Pseudomonas syringae pv. phaseolicola 1448A]
Length = 356
Score = 53.4 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 33/343 (9%), Positives = 87/343 (25%), Gaps = 89/343 (25%)
Query: 10 SMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKG--- 66
++ LH++ +L+ +F + +P ++ ++ + + + ++ + K
Sbjct: 20 AVALHILIFGMLFVSFAMTPDLPEAKP-IVQATLYQLKSKSQATTQTNQKIAGEAKKTAA 78
Query: 67 ---------------------SSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSK 105
+ E + + + + +D+ K + E + +
Sbjct: 79 RQTEVEQLEQKKIEQLKQEAVKAAEQKKEEAAQKAEEQKAADEAKKAEQKAEEAKKADDA 138
Query: 106 GEQALKESALLRMPVSPYDKQKISKATNKEQ----------------------------- 136
+ + + + I+K +E+
Sbjct: 139 KKADEAKKVADAKKLEEKQQADIAKKKAEEEAKKKTEEDAKKAAAEEAKKQAADEAKKKA 198
Query: 137 ------------------------DLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKR 172
AE K + K + R
Sbjct: 199 AEDAKKKAAEDAKKKAAADSAKKAQEAARKSAEDKKAQALADLLSDKPERQQALADERGD 258
Query: 173 IPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVR 232
+ ++R R W+ P + + V + + G + G
Sbjct: 259 ETAGSFDDLIRVRASEGWSRPPSAR--NNMSVTLQIGMLPDGTIASVSIAKSSGDG---- 312
Query: 233 RMLRENARKAVIKSQAFR----LSPSTYKSWRNITLFFVPSKM 271
+A AV L P+ + +R+ + F P +
Sbjct: 313 -PFDSSAVAAVKNIGRLTEMQGLKPADFAPYRSFKMTFTPGDL 354
>gi|163853967|ref|YP_001642010.1| hypothetical protein Mext_4571 [Methylobacterium extorquens PA1]
gi|163665572|gb|ABY32939.1| hypothetical protein Mext_4571 [Methylobacterium extorquens PA1]
Length = 147
Score = 53.4 bits (126), Expect = 4e-05, Method: Composition-based stats.
Identities = 19/106 (17%), Positives = 36/106 (33%), Gaps = 7/106 (6%)
Query: 156 PDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGF 215
P V + D + + + A W P RF+++ + L + G
Sbjct: 18 PQTLRGTQHVPLPAGDTAAPADTLKALYPALAACWKAPEGLSRFERVEITARLSLRRDGS 77
Query: 216 VLGKINVD-------VVGGTELVRRMLRENARKAVIKSQAFRLSPS 254
V+G + G R +L R A+ + R++P+
Sbjct: 78 VIGMPQITFAKTPFANTPGDTRARDILIRATRDAIARCTPVRVTPA 123
>gi|91786986|ref|YP_547938.1| TonB-like protein [Polaromonas sp. JS666]
gi|91696211|gb|ABE43040.1| TonB-like protein [Polaromonas sp. JS666]
Length = 282
Score = 53.4 bits (126), Expect = 4e-05, Method: Composition-based stats.
Identities = 34/253 (13%), Positives = 65/253 (25%), Gaps = 18/253 (7%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
L+ L S+ H + L + + + V L V + + + K
Sbjct: 7 LQIALGASIAFHAVLLTVRFVDPERFNRVFQDTP--LEVILVNAKSREKPDFAKAIAQAS 64
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
G E + + + L MP
Sbjct: 65 LAGGGQLEKGRATSPLPPSALTEMGDASDETQRQIESLHEQQTQLLTQIKKQLATMPPPD 124
Query: 123 YDK----QKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDA 178
+ + K + L I ++ I+ RP K+ + +
Sbjct: 125 MTQAATNPAHADREEKRRQLVKILAEIERRINEENARPKKRYISPATREEVYA-----VY 179
Query: 179 IAIVRNRVIANWNIPSDFKRFKKL--RVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLR 236
+R ++ + KKL + M +N G +L + G L
Sbjct: 180 YDELRRKIEDKGTVNFPELAGKKLYGELTMVMTVNFDGRILDTEVAETSGN-----LTLD 234
Query: 237 ENARKAVIKSQAF 249
A+ V + F
Sbjct: 235 RRAQSIVRGTGPF 247
>gi|288957627|ref|YP_003447968.1| protein [Azospirillum sp. B510]
gi|288909935|dbj|BAI71424.1| protein [Azospirillum sp. B510]
Length = 327
Score = 53.4 bits (126), Expect = 4e-05, Method: Composition-based stats.
Identities = 28/285 (9%), Positives = 61/285 (21%), Gaps = 41/285 (14%)
Query: 6 GLAISMILHVMFLLLLY--------------FNFNVQLLVPISRREMLSVDNIYN----- 46
L +S LH + L+ + V
Sbjct: 30 SLPLSFALHAGMIGLVTGFHAPPDPPPAVVSVELSFVAAAAEPASPAEPVAESTVGADTG 89
Query: 47 ------------EDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHAT 94
S E + S E +
Sbjct: 90 AHSEPAPEPAVAPAQPSDTRNTEPEMPPDVARPPVAEPQAEKSPAEEPPIDESPVAEVSM 149
Query: 95 ENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQG----ISFAEKKSID 150
+ ++ R P SP + + +
Sbjct: 150 PVLAEPANVETRPPVQPPVPARRPPHSPLRRDPSPTRPTPAAVPPAGRAGATEEQTAPTP 209
Query: 151 TVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFK-RFKKLRVKMHFQ 209
V + + + D ++ R+ + P + R ++ V + F
Sbjct: 210 AVPAVQTTAPAAPSPDAPLKSDRQAADYFGAIQARLARHKVYPPAARQRRQEGVVLVRFT 269
Query: 210 LNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPS 254
+ G + G V+ G +L + A + + ++ P+
Sbjct: 270 IVADGTITGWAVVEGSGHA-----ILDQAAEEMIRRASPLPPIPA 309
>gi|206602076|gb|EDZ38558.1| Putative TonB protein [Leptospirillum sp. Group II '5-way CG']
Length = 367
Score = 53.4 bits (126), Expect = 4e-05, Method: Composition-based stats.
Identities = 31/223 (13%), Positives = 70/223 (31%), Gaps = 15/223 (6%)
Query: 52 SKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALK 111
K K E + E D + + T +++ + Q
Sbjct: 137 PKVAKAPETAPKPVSRPHEARSSDLPGFRQVKKNVSSHRRETTAQRSEQVHPKQKTQKTA 196
Query: 112 ESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRK 171
E + K+ ++ Q Q +S A + T + + + ++S+
Sbjct: 197 EVKPVPKTTPSPKKKPAMTTISRSQMQQILSQAALGTPFTHHLNLAQDMAPAYSDRSNDL 256
Query: 172 RIPSQD--------AIAIVRNRVIANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKINV 222
+ + I ++ R P + ++ R + F +N+ G +
Sbjct: 257 NRIAANLEDETYSSYIKRIQERFETIGEYPVEAQQRGITGRALVTFVINEDGTLAAARLT 316
Query: 223 DVVGGTELVRRMLRENARKAVIKSQAFRLSPSTYKSWRNITLF 265
+ G R+L E A + V + + P ++ + +TL
Sbjct: 317 ESSGS-----RILDEEALRIVRVAAPYIPLPKSFHK-KELTLT 353
>gi|254302839|ref|ZP_04970197.1| ligand gated channel protein TonB [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
gi|148323031|gb|EDK88281.1| ligand gated channel protein TonB [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
Length = 262
Score = 53.4 bits (126), Expect = 4e-05, Method: Composition-based stats.
Identities = 32/273 (11%), Positives = 73/273 (26%), Gaps = 17/273 (6%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
++ + IS++LH+M L Q++ + +++ + + S
Sbjct: 1 MKKYILISLVLHLMILFGFGIIQTTQMVKDEPKNQIVPIAFV--AKQTSDNPGGKVLDTQ 58
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
+ + S E+ + + ++ E + S+ + E +
Sbjct: 59 EREKQSPESPKPKVEKKPEEKKLEEKKVEKKPEKKEIESNIPSKDAKPVEKKPEPVTSEN 118
Query: 123 YDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIV 182
+ + S + +S + S I+
Sbjct: 119 TQSTETTSKGESTSSDNSSSSGGSTNGTGSGSEGFGSNFISDGDGSYIALSAKGINYEII 178
Query: 183 RNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKA 242
+ K+++V + F + KG V KA
Sbjct: 179 NEVEPDYPSQAESIGYSKQVKVTVKFLVGLKGNVEKAEITQSHKDLG-----FDAEVMKA 233
Query: 243 VIKSQAFRLSPSTYKSWRNI------TLFFVPS 269
+ K + Y + +NI T F P
Sbjct: 234 IKKWR----FKPIYHNGKNIKVYFVKTFVFDPQ 262
>gi|148252867|ref|YP_001237452.1| putative energy transducer TonB [Bradyrhizobium sp. BTAi1]
gi|146405040|gb|ABQ33546.1| outer membrane transport energization protein TonB [Bradyrhizobium
sp. BTAi1]
Length = 263
Score = 53.4 bits (126), Expect = 4e-05, Method: Composition-based stats.
Identities = 23/212 (10%), Positives = 63/212 (29%), Gaps = 10/212 (4%)
Query: 61 VVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPV 120
++ E+ + + + E + + K + +E+ +
Sbjct: 53 ALEMASPQVEDNDLPAGPDSDAAEAAPEQMQQTAEVKESDAVKDKPTETEEEADRVVTMN 112
Query: 121 SPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIA 180
P +K + +Q ++ A ++ + + + Q
Sbjct: 113 DPKKPEKEEQQQAVQQAEASVASAAQEESARKALDEAAPPAETAKAPNPGMGKDKQKLTN 172
Query: 181 IVRNRVIANWNIPSDFKRFK--KLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLREN 238
++ A + + + K VK+ L++ G V+ + G + + +
Sbjct: 173 DWGRKISAYFELHKRYPEGKKRNGTVKVALVLSRAGKVMSASVMQSSGDS-----VFDQA 227
Query: 239 ARKAVIKSQAFRLSPSTY--KSWR-NITLFFV 267
A + +S PS + +I + F
Sbjct: 228 ALSMIHRSDPVPAPPSGLTDDQFSFSIDVNFN 259
>gi|118579960|ref|YP_901210.1| TonB family protein [Pelobacter propionicus DSM 2379]
gi|118502670|gb|ABK99152.1| outer membrane transport energization protein TonB [Pelobacter
propionicus DSM 2379]
Length = 261
Score = 53.0 bits (125), Expect = 4e-05, Method: Composition-based stats.
Identities = 19/92 (20%), Positives = 33/92 (35%), Gaps = 6/92 (6%)
Query: 163 SKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKIN 221
S ++ + A +R + P +R RV++ F + + G V
Sbjct: 160 SGNSVQLQRSGYLAEHFAYIREIIHRRLTYPRRAQREGWSGRVRVSFVIQEDGSVSDIRV 219
Query: 222 VDVVGGTELVRRMLRENARKAVIKSQAFRLSP 253
V G +L + A +A+ KS F P
Sbjct: 220 VGSSG-----YDILDQGAVEAIRKSAPFPRPP 246
>gi|150397535|ref|YP_001328002.1| TonB family protein [Sinorhizobium medicae WSM419]
gi|150029050|gb|ABR61167.1| TonB family protein [Sinorhizobium medicae WSM419]
Length = 308
Score = 53.0 bits (125), Expect = 4e-05, Method: Composition-based stats.
Identities = 31/222 (13%), Positives = 58/222 (26%), Gaps = 9/222 (4%)
Query: 50 HSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQA 109
+ +P + L + D + E +
Sbjct: 91 PAPTEAVSAQPSEMTPTEADVILPAEEVPVTKADDAAVIASVAPVETVIPEEKPELPKVV 150
Query: 110 LKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSS 169
E P K+K+++ + Q + + KS R +
Sbjct: 151 QPEVEKPEPKKEPVKKKKVARKKAGDGGKQAKTQNKGKSDGVENARAAAASGEKRGGSQE 210
Query: 170 RKRIPSQDAIAIVRNRVIANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKINVDVVGGT 228
+ VR ++ PS KR + + F + G V G
Sbjct: 211 IGNAAVSNYPGKVRRKLTRAIRYPSAAKRQGLRGVAHVSFTVTSGGGVASVGITKSAGS- 269
Query: 229 ELVRRMLRENARKAVIKSQAFRLSPSTY--KSWR-NITLFFV 267
+L + A + V ++ F P+ W NI + F
Sbjct: 270 ----PVLDQAALETVRRAAPFPAIPAGAGRDRWEFNIPVAFT 307
>gi|257487005|ref|ZP_05641046.1| TonB, C-terminal [Pseudomonas syringae pv. tabaci ATCC 11528]
gi|330988974|gb|EGH87077.1| TonB [Pseudomonas syringae pv. lachrymans str. M301315]
gi|331009353|gb|EGH89409.1| TonB [Pseudomonas syringae pv. tabaci ATCC 11528]
Length = 356
Score = 53.0 bits (125), Expect = 4e-05, Method: Composition-based stats.
Identities = 33/343 (9%), Positives = 87/343 (25%), Gaps = 89/343 (25%)
Query: 10 SMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKG--- 66
++ LH++ +L+ +F + +P ++ ++ + + + ++ + K
Sbjct: 20 AVALHILIFGMLFVSFAMTPDLPEAKP-IVQATLYQLKSKSQATTQTNQKIAGEAKKTAA 78
Query: 67 ---------------------SSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSK 105
+ E + + + + +D+ K + E + +
Sbjct: 79 RQTEVEQLEQKKIEQLKQEAVKAAEQKKEEAAQKAEEQKAADEAKKAEQKAEEAKKADDA 138
Query: 106 GEQALKESALLRMPVSPYDKQKISKATNKEQ----------------------------- 136
+ + + + I+K +E+
Sbjct: 139 KKADEAKKVADAKKLEEKQQADIAKKKAEEEAKKKAEEDAKKAAAEEAKKQAADEAKKKA 198
Query: 137 ------------------------DLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKR 172
AE K + K + R
Sbjct: 199 AEDVKKKAAEDAKKKAAADSAKKAQEAARKSAEDKKAQALADLLSDKPERQQALADERGD 258
Query: 173 IPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVR 232
+ ++R R W+ P + + V + + G + G
Sbjct: 259 ETAGSFDDLIRVRASEGWSRPPSAR--NNMSVTLQIGMLPDGTIASVSIAKSSGDG---- 312
Query: 233 RMLRENARKAVIKSQAFR----LSPSTYKSWRNITLFFVPSKM 271
+A AV L P+ + +R+ + F P +
Sbjct: 313 -PFDSSAVAAVKNIGRLTEMQGLKPADFAPYRSFKMTFTPGDL 354
>gi|192292331|ref|YP_001992936.1| TonB family protein [Rhodopseudomonas palustris TIE-1]
gi|192286080|gb|ACF02461.1| TonB family protein [Rhodopseudomonas palustris TIE-1]
Length = 264
Score = 53.0 bits (125), Expect = 4e-05, Method: Composition-based stats.
Identities = 27/244 (11%), Positives = 61/244 (25%), Gaps = 23/244 (9%)
Query: 10 SMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQ 69
++ LHV L + + V E G
Sbjct: 22 AVALHVGGAALALVSMPEDADDDALGAPAIEV--------GVEMMSPKIEASDLPPGPDT 73
Query: 70 ENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKIS 129
E + ++ E D T ET+ + K+ +
Sbjct: 74 EASMASPALNEQKAEVKDSDLPKDTPQETEEPDRVVTTETPKKVDEEQK---------EK 124
Query: 130 KATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIAN 189
++ + ++ + + + + + +
Sbjct: 125 AQQQQQASTESVAAEATAMPSNESAKEGPRSVAPAQGVGKAAARIRATWQKELVAYLDKH 184
Query: 190 WNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAF 249
P + + K +R+ + F+L++ G VL V+ G + A + +S
Sbjct: 185 KRYPKEAAQ-KNVRIVVGFELDRLGHVLSMRIVEGSGDA-----AFDQAALDMIKRSDPV 238
Query: 250 RLSP 253
P
Sbjct: 239 PAPP 242
>gi|315633595|ref|ZP_07888885.1| outer membrane receptor-mediated transport energizer protein TonB
[Aggregatibacter segnis ATCC 33393]
gi|315477637|gb|EFU68379.1| outer membrane receptor-mediated transport energizer protein TonB
[Aggregatibacter segnis ATCC 33393]
Length = 254
Score = 53.0 bits (125), Expect = 4e-05, Method: Composition-based stats.
Identities = 29/251 (11%), Positives = 76/251 (30%), Gaps = 21/251 (8%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
+S+++H + + +L+++ + + +I E + V +
Sbjct: 10 SFLLSVVIHAIIIFVLFWSHLTKTDTTANSATGEISTSISMEMLMAMVEADTPPVVEKAP 69
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
++ +V D +V+ + + + + K K ++ K+ + D+
Sbjct: 70 EPEKQEMVEDPTVKPEPPKVEKPKEPEKPKEKPKEKPKEKPKEKPKDKPKPKTDAVVGDR 129
Query: 126 QKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNR 185
+ + + ++ VR
Sbjct: 130 ---------------TVESNASVNSKATTTGPANTTNPNLVGNGVGGSERDAYLSAVRRE 174
Query: 186 VIANWNIPSDFK-RFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVI 244
+ + P+ + K+ V + F + G + G V G + L A KAV
Sbjct: 175 IEKHKRYPARAQMMRKQGVVTVSFSIAADGSISGASVVKSSGVED-----LDGAALKAVA 229
Query: 245 KSQAFRLSPST 255
+++ P+
Sbjct: 230 SARSIGPRPAG 240
>gi|218532908|ref|YP_002423724.1| hypothetical protein Mchl_5031 [Methylobacterium chloromethanicum
CM4]
gi|240141421|ref|YP_002965901.1| hypothetical protein MexAM1_META1p5020 [Methylobacterium extorquens
AM1]
gi|254563936|ref|YP_003071031.1| hypothetical protein METDI5621 [Methylobacterium extorquens DM4]
gi|218525211|gb|ACK85796.1| conserved hypothetical protein [Methylobacterium chloromethanicum
CM4]
gi|240011398|gb|ACS42624.1| hypothetical protein MexAM1_META1p5020 [Methylobacterium extorquens
AM1]
gi|254271214|emb|CAX27226.1| hypothetical protein METDI5621 [Methylobacterium extorquens DM4]
Length = 148
Score = 53.0 bits (125), Expect = 4e-05, Method: Composition-based stats.
Identities = 17/95 (17%), Positives = 34/95 (35%), Gaps = 7/95 (7%)
Query: 167 KSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVD--- 223
+ D + + + A W P RF+++ + L + G V+G +
Sbjct: 30 PAGDTAAAPADTLKALYPALAACWKAPEGLSRFERVEITARLSLRRDGSVIGMPQITFAK 89
Query: 224 ----VVGGTELVRRMLRENARKAVIKSQAFRLSPS 254
G R +L R A+ + R++P+
Sbjct: 90 TPFANTPGDTRARDILIRATRDAIARCTPVRVTPA 124
>gi|126662330|ref|ZP_01733329.1| hypothetical protein FBBAL38_03225 [Flavobacteria bacterium BAL38]
gi|126625709|gb|EAZ96398.1| hypothetical protein FBBAL38_03225 [Flavobacteria bacterium BAL38]
Length = 268
Score = 53.0 bits (125), Expect = 4e-05, Method: Composition-based stats.
Identities = 19/229 (8%), Positives = 51/229 (22%), Gaps = 18/229 (7%)
Query: 8 AISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGS 67
S+I ++FLL F P + ++V+ + + +
Sbjct: 15 VTSVIFVILFLLFTIFGLTYMDPPPEN---GIAVNFGTTDTGSGEIQPTEPVQMSPDQVK 71
Query: 68 SQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQK 127
++ V + V + + + S K ++ ++ S +
Sbjct: 72 AEPTPVEEDDVLTQDEEAPVTLPKKEVKKPVVKPSEPKPVTKPTDTKPVKPNNSALNSII 131
Query: 128 ISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRN--- 184
+ + R
Sbjct: 132 KGPKQDGTSQSGHGDDDQGGDKGNPNGSLYATSFYGNGSGDGNGAGNGTGWGLAGRKLSG 191
Query: 185 ---RVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTEL 230
++ + +V + +N++G V+ T
Sbjct: 192 NSKKIQDC---------NESGKVVVKIWVNKQGNVIRAERAQGTTNTNP 231
>gi|85716750|ref|ZP_01047718.1| TonB like protein [Nitrobacter sp. Nb-311A]
gi|85696468|gb|EAQ34358.1| TonB like protein [Nitrobacter sp. Nb-311A]
Length = 260
Score = 53.0 bits (125), Expect = 4e-05, Method: Composition-based stats.
Identities = 26/210 (12%), Positives = 61/210 (29%), Gaps = 7/210 (3%)
Query: 47 EDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKG 106
+ + P + + E + S + + S
Sbjct: 40 DPTARLVISEQPGPTLVEIVAVSPQGSTAVEGGEAAEPTSTAMMDLPPQTLAEEPSREIS 99
Query: 107 EQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVE 166
EQ + +P + +++A+ L ++ T V EL +
Sbjct: 100 EQGETIEKPVTLPTPRPKRAAVARASALPVLLAPSFAPPRERGATGVPDQPTSELTGTSD 159
Query: 167 KSSRKRIPSQDAIAIVRNRVIANWNIPSDFK-RFKKLRVKMHFQLNQKGFVLGKINVDVV 225
+ A + + + PS+ + + + + F +++ G VL V
Sbjct: 160 TAQAPADVPAAWKARLLSHLERYKRYPSEARMKGTEGTALLSFGMDRDGQVLRYHLVRSS 219
Query: 226 GGTELVRRMLRENARKAVIKSQAF-RLSPS 254
G E L + A ++++ + P
Sbjct: 220 GSPE-----LDDEAVAMIVRASPLPPVPPE 244
>gi|152996215|ref|YP_001341050.1| Tol-Pal system TolA [Marinomonas sp. MWYL1]
gi|150837139|gb|ABR71115.1| Tol-Pal system TolA [Marinomonas sp. MWYL1]
Length = 318
Score = 53.0 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 28/224 (12%), Positives = 73/224 (32%), Gaps = 12/224 (5%)
Query: 53 KYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKE 112
K K++ + + + E + E + ++Q + + + ++ L E
Sbjct: 100 KQKQLAQAKQAKEKAEAEKQEAEKQEAERKKKAAEQKRIAQEAESKRLAQEQADKKRLAE 159
Query: 113 SALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKR 172
++ + +E+ + A+ K +++++ +
Sbjct: 160 KEASEKKKQELARKAEADRLAEEERKRQEEAAKLAEKKKAEEAAAKAAAEEAMQRAADEA 219
Query: 173 IPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVR 232
Q ++ +RV A W P + ++ ++ G V+ G
Sbjct: 220 QMVQSISGLINDRVTAAWIRPPSAR--NNMKAQLRIYFLPNGEVMNAQITKSSGDA---- 273
Query: 233 RMLRENARKAVIKSQAFRLSP--STY---KSWRNITLFFVPSKM 271
+ + A AV K + +Y +++R + L F P +
Sbjct: 274 -LFDQRAVDAVYKVRKIEELSKVDSYVFERNFRQVDLIFNPQDL 316
>gi|239831246|ref|ZP_04679575.1| Hypothetical protein OINT_1000427 [Ochrobactrum intermedium LMG
3301]
gi|239823513|gb|EEQ95081.1| Hypothetical protein OINT_1000427 [Ochrobactrum intermedium LMG
3301]
Length = 120
Score = 53.0 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 20/105 (19%), Positives = 37/105 (35%), Gaps = 7/105 (6%)
Query: 166 EKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKIN--VD 223
+ + + V + + A W P+ K V + F + G ++G
Sbjct: 15 ATAGSVQAQELRTMDDVGSALNACWTAPAGSKNSA---VTLSFSFKRNGSLMGPPRPSAI 71
Query: 224 VVGGTELVRRMLRENARKAVIKSQAFRLSPSTYK--SWRNITLFF 266
V G + ++ A AV K +L+PS + T+ F
Sbjct: 72 NVQGDDKAKKAFVNAAIDAVEKCTPLKLAPSLAEGIGGNVFTMQF 116
>gi|320329681|gb|EFW85670.1| TonB [Pseudomonas syringae pv. glycinea str. race 4]
gi|330877974|gb|EGH12123.1| TonB [Pseudomonas syringae pv. glycinea str. race 4]
Length = 356
Score = 53.0 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 33/343 (9%), Positives = 87/343 (25%), Gaps = 89/343 (25%)
Query: 10 SMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKG--- 66
++ LH++ +L+ +F + +P ++ ++ + + + ++ + K
Sbjct: 20 AVALHILIFGMLFVSFAMTPDLPEAKP-IVQATLYQLKSKSQATTQTNQKIAGEAKKTAA 78
Query: 67 ---------------------SSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSK 105
+ E + + + + +D+ K + E + +
Sbjct: 79 RQTEVEQLEQKKIEQLKQEAVKAAEQKKEEAAQKAEEQKAADEAKKAEQKAEEAKKAHDA 138
Query: 106 GEQALKESALLRMPVSPYDKQKISKATNKEQ----------------------------- 136
+ + + + I+K +E+
Sbjct: 139 KKADEAKKVADAKKLEEKQQADIAKKKAEEEAKKKAEEDAKKAAAEEAKKQAADEAKKKA 198
Query: 137 ------------------------DLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKR 172
AE K + K + R
Sbjct: 199 AEDAKKKAAEDAKKKAAADSAKKAQEAARKSAEDKKAQALADLLSDKPERQQALADERGD 258
Query: 173 IPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVR 232
+ ++R R W+ P + + V + + G + G
Sbjct: 259 ETAGSFDDLIRVRASEGWSRPPSAR--NNMSVTLQIGMLPDGTIASVSIAKSSGDG---- 312
Query: 233 RMLRENARKAVIKSQAFR----LSPSTYKSWRNITLFFVPSKM 271
+A AV L P+ + +R+ + F P +
Sbjct: 313 -PFDSSAVAAVKNIGRLTEMQGLKPADFAPYRSFKMTFTPGDL 354
>gi|330964829|gb|EGH65089.1| TonB [Pseudomonas syringae pv. actinidiae str. M302091]
Length = 356
Score = 53.0 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 27/213 (12%), Positives = 59/213 (27%), Gaps = 11/213 (5%)
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
K ++ L + + + + + E K + + +
Sbjct: 149 DAKKLEEKQLADIAKKKAEDEAKKKAEEDAKKAAAEEAKKQAADEAKKKAAEDAKKKAAE 208
Query: 123 YDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIV 182
K+K + + K+ AE K + K + R + ++
Sbjct: 209 DAKKKAAADSAKKAQEAARKSAEDKKAQALADLLSDKPERQQALADERGDETAGSFDDLI 268
Query: 183 RNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKA 242
R R W+ P + + V + + G + G +A A
Sbjct: 269 RVRASEGWSRPPSAR--NNMSVTLQIGMLPDGTIASVSIAKSSGDG-----PFDSSAVAA 321
Query: 243 VIKSQAFR----LSPSTYKSWRNITLFFVPSKM 271
V L P+ + +R+ + F P +
Sbjct: 322 VKNIGRLTEMQGLKPADFAPYRSFKMTFTPGDL 354
>gi|330892245|gb|EGH24906.1| TonB [Pseudomonas syringae pv. mori str. 301020]
Length = 356
Score = 53.0 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 33/343 (9%), Positives = 87/343 (25%), Gaps = 89/343 (25%)
Query: 10 SMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKG--- 66
++ LH++ +L+ +F + +P ++ ++ + + + ++ + K
Sbjct: 20 AVALHILIFGMLFVSFAMTPDLPEAKP-IVQATLYQLKSKSQATTQTNQKIAGEAKKTAA 78
Query: 67 ---------------------SSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSK 105
+ E + + + + +D+ K + E + +
Sbjct: 79 RQTEVEQLEQKKIEQLKQEAVKAAEQKKEEAAQKAEEQKAADEAKKAEQKAEEAKKADDA 138
Query: 106 GEQALKESALLRMPVSPYDKQKISKATNKEQ----------------------------- 136
+ + + + I+K +E+
Sbjct: 139 KKADEAKKVADAKKLEEKQQADIAKKKAEEEAKKKAEEDAKKAAAEEAKKQAADEAKKKA 198
Query: 137 ------------------------DLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKR 172
AE K + K + R
Sbjct: 199 AEDAKKKAAEDAKKKAAADSAKKAQEAARKSAEDKKAQALADLLSDKPERQQALADERGD 258
Query: 173 IPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVR 232
+ ++R R W+ P + + V + + G + G
Sbjct: 259 ETAGSFDDLIRVRASEGWSRPPSAR--NNMSVTLQIGMLPDGTIASVSIAKSSGDG---- 312
Query: 233 RMLRENARKAVIKSQAFR----LSPSTYKSWRNITLFFVPSKM 271
+A AV L P+ + +R+ + F P +
Sbjct: 313 -PFDSSAVAAVKNIGRLTEMQGLKPADFAPYRSFKMTFTPGDL 354
>gi|296447815|ref|ZP_06889728.1| TolA protein [Methylosinus trichosporium OB3b]
gi|296254674|gb|EFH01788.1| TolA protein [Methylosinus trichosporium OB3b]
Length = 407
Score = 53.0 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 19/237 (8%), Positives = 56/237 (23%), Gaps = 11/237 (4%)
Query: 36 REMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATE 95
++ + + + + + ++ R E
Sbjct: 170 PPEREPEDAEVVRPKPPPRPPEKVEKPEPAKPAAPQKPAERPMAKDEPRLKTDEVAKLLE 229
Query: 96 NETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVR 155
+ + +S R P + + + + + +
Sbjct: 230 RKKSTEKAPA--DGPADSKSDRPATKPKSGDETAPKSKFDAANIANLLSREAPQRRAATG 287
Query: 156 PDKKELLSKVEKSSRKRIPS----QDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLN 211
+ + S ++ S + W + + + + F L
Sbjct: 288 REMTKTASLGAPTANAARMSPTMEARINDYLIENYRRCWQ-AALVQNARSYVPLVEFHLT 346
Query: 212 QKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLS---PSTYKSWRNITLF 265
+ G + G + + ++ + R E A A+ + + Y W T
Sbjct: 347 RAGALEGPPRL-LNPSSDPIERSRGEQALAAIRRCSPMSVPEFFAPYYDHWHVTTFN 402
>gi|154246220|ref|YP_001417178.1| TonB family protein [Xanthobacter autotrophicus Py2]
gi|154160305|gb|ABS67521.1| TonB family protein [Xanthobacter autotrophicus Py2]
Length = 247
Score = 53.0 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 33/253 (13%), Positives = 67/253 (26%), Gaps = 26/253 (10%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
L +GLA S+ LH +L P ++L V+
Sbjct: 5 LGHGLAASLALHGALILPFVVVL---DPPPPQDSQLLVVELQGLVSDT---------QSE 52
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
Q +E + Q A+ + + + G A
Sbjct: 53 QQVLQQTRGAPDQKQQEEAQEEQKTQVAQAASPDRPEEDPAPDGTLAPAPPPSPEQQAQD 112
Query: 123 YDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIV 182
Q+ +K + G++ +++ V + + + +
Sbjct: 113 APPQERAKPAEAQSGTPGLADV---------QGAQEQKQAQTVAPEVDEAQILRAYVRSL 163
Query: 183 RNRVIANWNIPSDFKRF--KKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENAR 240
++ N P D +R +K + F + G + + A
Sbjct: 164 TKKLKDNIVYPPDAQRSIRRKGTAYVSFAVEADGALRPGTLKIERSSGTPAYDVA---AL 220
Query: 241 KAVIKSQAFRLSP 253
+ V K+ F P
Sbjct: 221 RTVEKNAPFDPPP 233
>gi|149196303|ref|ZP_01873358.1| hypothetical protein LNTAR_14137 [Lentisphaera araneosa HTCC2155]
gi|149140564|gb|EDM28962.1| hypothetical protein LNTAR_14137 [Lentisphaera araneosa HTCC2155]
Length = 290
Score = 52.6 bits (124), Expect = 5e-05, Method: Composition-based stats.
Identities = 27/247 (10%), Positives = 69/247 (27%), Gaps = 20/247 (8%)
Query: 7 LAISMILHVMFLLLLYFNFNVQLLVPISRRE---MLSVDNIYNEDYHSSKYKKIEEPVVQ 63
L S+I+H LL F + E +SVD S
Sbjct: 13 LIFSVIIHG-LALLSLFILPFFKKEKKEQVENSLSVSVDLSQLSPTTSKPKAITTPISTP 71
Query: 64 FKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVS-- 121
+ E + + + N Q K A + + + K+ +
Sbjct: 72 EPETKPETPPKKATPESNKADLDKQAKEKAEQIKKDALKKATKALEEKKIRDQKARAKRD 131
Query: 122 -------------PYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKS 168
++++ ++A + ++ + R + + +
Sbjct: 132 AEKKAAAQKEAAAKKERERKAQAKRDADRKAELKRQKEAADRRARERAAAAKKAAAKANA 191
Query: 169 SRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKL-RVKMHFQLNQKGFVLGKINVDVVGG 227
+++ + +++ + W+ RV + +++ G ++ K +
Sbjct: 192 AKQSKLNNQYKSLLGAGLGQQWDRVYLDSGISTTDRVTVQVTIDRSGRIISKKIIKAAKS 251
Query: 228 TELVRRM 234
L R
Sbjct: 252 AALNRAA 258
>gi|320323047|gb|EFW79136.1| TonB [Pseudomonas syringae pv. glycinea str. B076]
Length = 356
Score = 52.6 bits (124), Expect = 5e-05, Method: Composition-based stats.
Identities = 27/219 (12%), Positives = 60/219 (27%), Gaps = 11/219 (5%)
Query: 57 IEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALL 116
+ V K ++ + + + + + E K +
Sbjct: 143 EAKKVADAKKLEEKQQADIAKKKAEEEAKKKAEEDAKKAAAEEAKKQAADEAKKKAAEDA 202
Query: 117 RMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQ 176
+ + K+K + + K+ AE K + K + R +
Sbjct: 203 KKKAAEDAKKKAAADSAKKAQEAARKSAEDKKAQALADLLSDKPERQQALADERGDETAG 262
Query: 177 DAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLR 236
++R R W+ P + + V + + G + G
Sbjct: 263 SFDDLIRVRASEGWSRPPSAR--NNMSVTLQIGMLPDGTIASVSIAKSSGDG-----PFD 315
Query: 237 ENARKAVIKSQAFR----LSPSTYKSWRNITLFFVPSKM 271
+A AV L P+ + +R+ + F P +
Sbjct: 316 SSAVAAVKNIGRLTEMQGLKPADFAPYRSFKMTFTPGDL 354
>gi|58581290|ref|YP_200306.1| hypothetical protein XOO1667 [Xanthomonas oryzae pv. oryzae
KACC10331]
gi|84623208|ref|YP_450580.1| TolA protein [Xanthomonas oryzae pv. oryzae MAFF 311018]
gi|58425884|gb|AAW74921.1| TolA protein [Xanthomonas oryzae pv. oryzae KACC10331]
gi|84367148|dbj|BAE68306.1| TolA protein [Xanthomonas oryzae pv. oryzae MAFF 311018]
Length = 346
Score = 52.6 bits (124), Expect = 5e-05, Method: Composition-based stats.
Identities = 25/242 (10%), Positives = 64/242 (26%), Gaps = 11/242 (4%)
Query: 33 ISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDF----SVQENGDRFSDQ 88
+ ++ + + + D + QE R + ++ + +
Sbjct: 111 PTPQQAQAQERVAQPDKVDQDRVDALAISAEKAKQEQEAKRRQEQIDLTERKRQEEAEQK 170
Query: 89 TKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKS 148
+ + E Q E A + ++ +Q+ + Q +
Sbjct: 171 LRLAKQQEEADAKKKQAAAQQAAEDAERQKKIADIRRQRAQADKDMALAEQKLRQVAAAR 230
Query: 149 IDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHF 208
+ + S +A ++ +V+A W P + + ++
Sbjct: 231 AQQSSAATATSAQPTAGQG-GTSTDLSAKYVAAIQQKVLAQWVRPPSVPPGQ--KCTINI 287
Query: 209 QLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPSTYKSWRNITLFFVP 268
+ G V+ + + AV+ +Q RN+T F
Sbjct: 288 RQLPGGSVMEAKVA----PGCPYDEAGQRSIEAAVLSAQPLPYRGFESVFQRNLTFVFTA 343
Query: 269 SK 270
Sbjct: 344 QD 345
>gi|66767468|ref|YP_242230.1| TolA protein [Xanthomonas campestris pv. campestris str. 8004]
gi|66572800|gb|AAY48210.1| TolA protein [Xanthomonas campestris pv. campestris str. 8004]
Length = 345
Score = 52.6 bits (124), Expect = 5e-05, Method: Composition-based stats.
Identities = 29/256 (11%), Positives = 75/256 (29%), Gaps = 15/256 (5%)
Query: 24 NFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGD 83
+ +P R + ++ K+++ V S+E ++ + +
Sbjct: 95 SVPPPQPIPELRPQDAPTQQQAQAQERVAQPDKVDQDKVDALAISEEKAKQEQEAKRRQE 154
Query: 84 RFS--DQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGI 141
+ ++ + E + + + + E A K+ A + ++KI+ + +
Sbjct: 155 QIDLTERKRQEEAEQKLRLAKQQEEEDAKKKQAAAQQAAQAEREKKIADIRRQREQADKE 214
Query: 142 SFAEKKS-------IDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPS 194
+ ++ + S A ++ +V+A W P
Sbjct: 215 AKLAEQKLRQVAAARAQQASSAAAATAQPTAGQGGTNTDLSAKYAAAIQQKVLAQWVRPP 274
Query: 195 DFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPS 254
L+ ++ + G V+ + + AV+ +Q
Sbjct: 275 SVPP--GLKCTINIRQLPGGQVMEAKVA----PGCPYDEAGQRSIEAAVLSAQPLPYRGF 328
Query: 255 TYKSWRNITLFFVPSK 270
RN+T F
Sbjct: 329 ESVFQRNLTFVFTAQD 344
>gi|146338973|ref|YP_001204021.1| energy transducer TonB, C-terminal region [Bradyrhizobium sp.
ORS278]
gi|146191779|emb|CAL75784.1| Energy transducer TonB, C-terminal region [Bradyrhizobium sp.
ORS278]
Length = 307
Score = 52.6 bits (124), Expect = 5e-05, Method: Composition-based stats.
Identities = 22/240 (9%), Positives = 55/240 (22%), Gaps = 13/240 (5%)
Query: 26 NVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSV-----QE 80
+ P + ++ + + K E + + + E
Sbjct: 60 PAVVNEPAPIAQETPAESAPPTEPPKEEPAKDEPVAREAIAEPVPQVQPEPEPQVTAQPE 119
Query: 81 NGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQG 140
+ Q + ++ P ++ + KE +
Sbjct: 120 AVPQAEPQVALAPEPPRADDVVPPPSPKPIEAKPPEPKPAPSPERVEHKPVEKKETKEKA 179
Query: 141 ISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIP--SQDAIAIVRNRVIANWNIPSDFKR 198
+ L+ + + + VR + + PSD
Sbjct: 180 ERKPPPPKPVAAPASRPSRVALAPNAGEDSEGSREGQANWNSQVRASIARAASYPSDGNG 239
Query: 199 FKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPSTYKS 258
+ +++ G +L + G L A V ++ F P +
Sbjct: 240 ASG-TATVTVVIDRNGRLLSRRLAGSSGS-----PALDRAALSIVERAAPFPRFPPVMRQ 293
>gi|39995964|ref|NP_951915.1| TonB-dependent receptor [Geobacter sulfurreducens PCA]
gi|39982729|gb|AAR34188.1| TonB-dependent receptor, putative [Geobacter sulfurreducens PCA]
gi|307634757|gb|ADI83702.2| TonB-related protein [Geobacter sulfurreducens KN400]
Length = 293
Score = 52.6 bits (124), Expect = 5e-05, Method: Composition-based stats.
Identities = 34/249 (13%), Positives = 64/249 (25%), Gaps = 33/249 (13%)
Query: 13 LHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEE------------- 59
LH L + R+E + +D D +
Sbjct: 20 LHAGVFALFLV---FPQQRQVVRQEPIMIDLEDIPDLSPQPPATDRKEARRFAEDRHRVP 76
Query: 60 ----PVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESAL 115
P +L + Q + A E E + +
Sbjct: 77 REMAPRGDMDRDRIASLPSRQQPRMVPRPAPAQREPTAREPAPSPGDIPVREPSQGGGGV 136
Query: 116 LRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPS 175
LR + ++++ + L I +K V D K L + +
Sbjct: 137 LRPRTRGENLPEMAQLMPSAERLAKIEDNYRKRFSEDVAEGDTKFLDTDDIQF------- 189
Query: 176 QDAIAIVRNRVIANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRM 234
+ N V W P+D R + V + N+ G + + G R+
Sbjct: 190 GSFLRRFENAVYGVWRYPADAARLGIEGVVPVKITFNRSGEIEKYEILQGSGS-----RI 244
Query: 235 LRENARKAV 243
L + + +
Sbjct: 245 LDDEVGRTL 253
>gi|66044662|ref|YP_234503.1| TonB, C-terminal [Pseudomonas syringae pv. syringae B728a]
gi|302187152|ref|ZP_07263825.1| tolA protein [Pseudomonas syringae pv. syringae 642]
gi|63255369|gb|AAY36465.1| TonB, C-terminal [Pseudomonas syringae pv. syringae B728a]
gi|330968886|gb|EGH68952.1| tolA protein [Pseudomonas syringae pv. aceris str. M302273PT]
Length = 356
Score = 52.6 bits (124), Expect = 5e-05, Method: Composition-based stats.
Identities = 27/213 (12%), Positives = 59/213 (27%), Gaps = 11/213 (5%)
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
K ++ L + + + + + E K + + +
Sbjct: 149 DAKKLEEKQLADIAKKKAEDEAKKKAEEDAKKAAAEEAKKQAADEAKKKAAEDAKKKAAE 208
Query: 123 YDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIV 182
K+K + + K+ AE K + K + R + ++
Sbjct: 209 DAKKKAAADSAKKAQEAARKSAEDKKAQALADLLSDKPERQQALADERGDETAGSFDDLI 268
Query: 183 RNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKA 242
R R W+ P + + V + + G + G +A A
Sbjct: 269 RVRASEGWSRPPSAR--NNMSVTLQIGMLPDGTIASVSIAKSSGDG-----PFDSSAVAA 321
Query: 243 VIKSQAFR----LSPSTYKSWRNITLFFVPSKM 271
V L P+ + +R+ + F P +
Sbjct: 322 VKNIGRLTEMQGLKPADFAPYRSFKMTFTPGDL 354
>gi|326795238|ref|YP_004313058.1| protein TolA [Marinomonas mediterranea MMB-1]
gi|326546002|gb|ADZ91222.1| protein TolA [Marinomonas mediterranea MMB-1]
Length = 339
Score = 52.6 bits (124), Expect = 5e-05, Method: Composition-based stats.
Identities = 30/231 (12%), Positives = 77/231 (33%), Gaps = 12/231 (5%)
Query: 46 NEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSK 105
E + + ++ + + ++ +E D+ + + + + +K
Sbjct: 114 AEQARNKELQRQKLEAQRKADEKKKAQAAKQKAKEEADKKARDKAKADADAKAREQEKAK 173
Query: 106 GEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKV 165
E+ ++ R + K+K + Q + A + + ++E+ ++
Sbjct: 174 EEKRKRQEVERRKQLEAEQKKKAEQELLARQREETAKKAAEARKKRDDQKRQQQEVQAQK 233
Query: 166 EKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVV 225
++ + Q ++ R+ A+W P + + VK+ G V +D
Sbjct: 234 DRDVAEAQAVQSLSGLINERITASWIRPPSAR--NNMNVKLRIFFVPTGEVRDVQIMDRS 291
Query: 226 GGTELVRRMLRENARKAVIKSQAFRLSPST-----YKSWRNITLFFVPSKM 271
G +A AV K + +++R + L F P +
Sbjct: 292 GND-----AFDRSAIAAVKKVERIEELSELDSYIFERNFRQVDLIFNPQDL 337
>gi|39936538|ref|NP_948814.1| energy transducer TonB [Rhodopseudomonas palustris CGA009]
gi|39650394|emb|CAE28917.1| possible energy transducer TonB [Rhodopseudomonas palustris CGA009]
Length = 264
Score = 52.6 bits (124), Expect = 6e-05, Method: Composition-based stats.
Identities = 27/244 (11%), Positives = 62/244 (25%), Gaps = 23/244 (9%)
Query: 10 SMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQ 69
++ LHV L + + + V E G
Sbjct: 22 AVALHVGGAALALVSMPEEADDDALGAPAIEV--------GVEMMSPKIEASDLPPGPDT 73
Query: 70 ENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKIS 129
E + ++ E D T ET+ + K+ +
Sbjct: 74 EASMASPALNEQKAEVKDSDLPKDTPQETEEPDRVVTTETPKKVDEEQK---------EK 124
Query: 130 KATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIAN 189
++ + ++ + + + + + +
Sbjct: 125 AQQQQQASTESVAAEATAMPSNESAKEGPRSVAPAQGVGKAAARIRATWQKELVAYLDKH 184
Query: 190 WNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAF 249
P + + K +R+ + F+L++ G VL V+ G + A + +S
Sbjct: 185 KRYPKEAAQ-KNVRIVVGFELDRLGHVLSMRIVEGSGDA-----AFDQAALDMIKRSDPV 238
Query: 250 RLSP 253
P
Sbjct: 239 PAPP 242
>gi|121602816|ref|YP_988483.1| TolA domain-containing protein [Bartonella bacilliformis KC583]
gi|120614993|gb|ABM45594.1| TolA domain protein [Bartonella bacilliformis KC583]
Length = 497
Score = 52.6 bits (124), Expect = 6e-05, Method: Composition-based stats.
Identities = 32/253 (12%), Positives = 65/253 (25%), Gaps = 10/253 (3%)
Query: 26 NVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRF 85
++ E + E K + + +
Sbjct: 239 PKPAKPKPAQPEPTQPEPTQPESAQPKPAKPKPAQPEPTQPEPTQPESAQPKPAKPKPAQ 298
Query: 86 SDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAE 145
+ + E A + P + + EQ ++ I E
Sbjct: 299 PEPIQPKPAPAIIPPPLKPLPETAPLPRVKAKAPSKRPQQTAQALPPKGEQTIEDILALE 358
Query: 146 KK-------SIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPS-DFK 197
K + R K E + + +Q + + + + +
Sbjct: 359 KNDLINRARTQGGGAKRSQKPEATGAKKDVNASERMAQTLVNLAGACIQNKLRLVAIGGN 418
Query: 198 RFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAF-RLSPSTY 256
+ V++ FQL+ G V G +D + G E + ++ AV Q + L Y
Sbjct: 419 LQNRPIVRLQFQLDNNGMVRGTPIIDPLQGDESQKTIMTRQVYAAVFACQPYADLPRDQY 478
Query: 257 KSW-RNITLFFVP 268
W + P
Sbjct: 479 NLWGQGFDFNVDP 491
Score = 40.3 bits (92), Expect = 0.31, Method: Composition-based stats.
Identities = 20/173 (11%), Positives = 55/173 (31%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
++ LA S H++FL+L +F +P + E +S+ S + + P
Sbjct: 1 MKWSLAFSFAAHILFLILGMMHFIHLPSLPSHQMEAVSITLAPLSQELSLQQGSLSAPPD 60
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
+ ++ + + E R + ++ A +
Sbjct: 61 ESPAPKPTTKPQEKEQARHVGDGKMDLAAPLKKREKPRQIDAASPTFGEKDAAELPVLPQ 120
Query: 123 YDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPS 175
+++ ++ + + A+ + +P+ + S K ++
Sbjct: 121 KTQEERAQPELTQPESVQPKPAKPEPAQPEPTQPEPTQPESAQPKPAKPEPAQ 173
>gi|77464501|ref|YP_354005.1| putative TonB protein [Rhodobacter sphaeroides 2.4.1]
gi|77388919|gb|ABA80104.1| Putative TonB protein [Rhodobacter sphaeroides 2.4.1]
Length = 294
Score = 52.6 bits (124), Expect = 6e-05, Method: Composition-based stats.
Identities = 23/207 (11%), Positives = 52/207 (25%), Gaps = 10/207 (4%)
Query: 48 DYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGE 107
+ E + + + E D D + E
Sbjct: 81 PQVEAPVAPEPEEIAEQEPELAPPPPDVRPSAETVD-LPDIPVPTSETFAYDPPPPPPPE 139
Query: 108 QALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEK 167
+ P ++ + + + A + V
Sbjct: 140 EEEVAEIPPDARPMPRPERTPPPEKKPDPPKREVKKAAAPPPQQAAAPTRSTGSAAAVAS 199
Query: 168 SSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGG 227
+ + + A +R R+ + R + V + ++Q G + G V G
Sbjct: 200 RGQVQNLTAKWGAEIRKRIQR----HTRGARGQAGEVTVRLTVSQGGALGGASVVRSSGN 255
Query: 228 TELVRRMLRENARKAVIKSQAFRLSPS 254
+ + A +AV + F +P+
Sbjct: 256 PR-----IDQLALRAVQSAGRFPAAPA 277
>gi|90418653|ref|ZP_01226564.1| possible energy transducer for iron transport, TonB [Aurantimonas
manganoxydans SI85-9A1]
gi|90336733|gb|EAS50438.1| possible energy transducer for iron transport, TonB [Aurantimonas
manganoxydans SI85-9A1]
Length = 156
Score = 52.6 bits (124), Expect = 6e-05, Method: Composition-based stats.
Identities = 18/150 (12%), Positives = 43/150 (28%), Gaps = 9/150 (6%)
Query: 104 SKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLS 163
+R V ++ + ++ + + KK+ ++
Sbjct: 2 PVPTFRPTPPPKVRQAVREKKQEIKPRKPRQKVERKTPRRQVKKAAPPPSTATKGRKQQQ 61
Query: 164 KVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVD 223
+ + R V+ R+ P + V + F+++ G V
Sbjct: 62 VSQGARVSRSALTSWRNAVQARLNRYKRSP---RGGGSGTVTVSFRMDGNGRVTSVRVAG 118
Query: 224 VVGGTELVRRMLRENARKAVIKSQAFRLSP 253
G R+L + A + ++ F P
Sbjct: 119 SAG------RILDDAAVSLLRRASPFPAPP 142
>gi|75676242|ref|YP_318663.1| TonB like protein [Nitrobacter winogradskyi Nb-255]
gi|74421112|gb|ABA05311.1| TonB like protein [Nitrobacter winogradskyi Nb-255]
Length = 256
Score = 52.6 bits (124), Expect = 6e-05, Method: Composition-based stats.
Identities = 27/251 (10%), Positives = 73/251 (29%), Gaps = 25/251 (9%)
Query: 9 ISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSS 68
I++ H + L ++ LV + V+ + + S ++ + ++
Sbjct: 18 IALAAHTAVVFTLVYD-PAIKLVIDEQPGPTFVEIVTVPPHGS--TAAKQDEAAEPASTA 74
Query: 69 QENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKI 128
L +E+ SD+ + + + + + +R+ +
Sbjct: 75 PAELPLPALAEESPPEISDRGEETEKPVTLPVPNPKRAAVPKRSAPRVRLAARSAPPRTS 134
Query: 129 SKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIA 188
+ T+ + + S A + + +
Sbjct: 135 EQLTDAA----------------GTPEQLEGGATGTTDISQVPVDVLSAWKARLLSHLER 178
Query: 189 NWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQ 247
PS ++ + + F ++ +G VLG G +E L E ++++
Sbjct: 179 YKRYPSAARKKGTEGTAYLSFGMDSEGRVLGYHLARSSGSSE-----LDEEVLAMIVRAS 233
Query: 248 AFRLSPSTYKS 258
+P +
Sbjct: 234 PLPPAPPEMNT 244
>gi|319764348|ref|YP_004128285.1| tonb family protein [Alicycliphilus denitrificans BC]
gi|330826354|ref|YP_004389657.1| TonB family protein [Alicycliphilus denitrificans K601]
gi|317118909|gb|ADV01398.1| TonB family protein [Alicycliphilus denitrificans BC]
gi|329311726|gb|AEB86141.1| TonB family protein [Alicycliphilus denitrificans K601]
Length = 286
Score = 52.6 bits (124), Expect = 6e-05, Method: Composition-based stats.
Identities = 27/229 (11%), Positives = 63/229 (27%), Gaps = 5/229 (2%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
L+ L +S+ +H + L + + + V L V + + +
Sbjct: 13 LQIALGLSIAIHALLLTVRFVDPERFDRVFQDTP--LEVILVNAKSGERPDKAQAIAQAS 70
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
G + + A + + + + L + P
Sbjct: 71 LAGGGDAAKGRATSPLPYSALTSIGDDLEEAQRRMDQM-LEQQTQLLAQVRQQLAILPKP 129
Query: 123 YDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIV 182
++ A N+ Q+ + + + + + + + + +
Sbjct: 130 DPRKASEHAENQAQEEKRRQLVKLLAEIEKRINEENARPRKRYISPATREEVYAVYYDQL 189
Query: 183 RNRVIANWNIPSDFKRFKKL--RVKMHFQLNQKGFVLGKINVDVVGGTE 229
R +V + KKL + M +N G VL V G +
Sbjct: 190 RRKVEDKGTQNFPEQGGKKLYGELIMIVTVNHDGRVLETEVVQGSGNRQ 238
>gi|237748800|ref|ZP_04579280.1| predicted protein [Oxalobacter formigenes OXCC13]
gi|229380162|gb|EEO30253.1| predicted protein [Oxalobacter formigenes OXCC13]
Length = 310
Score = 52.6 bits (124), Expect = 6e-05, Method: Composition-based stats.
Identities = 18/205 (8%), Positives = 44/205 (21%), Gaps = 5/205 (2%)
Query: 46 NEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSK 105
++ + + + ++ + E + + ++
Sbjct: 92 VKEATPEPKVTARPDIALEQEKKKAEKKAAEDRKKAEAKQRADEARAQREEQVRLKKEAE 151
Query: 106 GEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKV 165
+++ G T P
Sbjct: 152 QASRKQKAEAAASQKRAKALLDQEARRIAGGGSGGGKGKGSGGGGTRTTGPTGTGGSGTA 211
Query: 166 EKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVV 225
+S+ IA VR ++ N + + V +L G +
Sbjct: 212 ARSTGPGTADAAYIAKVRTKIKNNTSFNASSAIMGNPPVIYDVELLPDGTLRNIRKRKSS 271
Query: 226 GGTELVRRMLRENARKAVIKSQAFR 250
G E +A+ KS +
Sbjct: 272 G-----IPGFDEAVLRAIEKSAPYP 291
>gi|27379019|ref|NP_770548.1| hypothetical protein blr3908 [Bradyrhizobium japonicum USDA 110]
gi|27352169|dbj|BAC49173.1| blr3908 [Bradyrhizobium japonicum USDA 110]
Length = 275
Score = 52.6 bits (124), Expect = 6e-05, Method: Composition-based stats.
Identities = 32/211 (15%), Positives = 62/211 (29%), Gaps = 9/211 (4%)
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
S S ++ + K E + + + E + +
Sbjct: 60 PPVQESDRAPGPTDSEEQEERPALPEQKAEVKETDLPQDRPQQAEDPDRLVTENKPKKEQ 119
Query: 123 YDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIV 182
D K++ + S A ++ R +K + + + D +
Sbjct: 120 DDDPKVAAVETPAMEASQKSVAMERQTFEDATREAEKAMAPVLGIGKDILKLTADWNRKI 179
Query: 183 RNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKA 242
+ A+ + + K VK+ F LN++G V+ V+ G A
Sbjct: 180 SAHLSAH-KVNPEGKEPNNQTVKVSFALNRRGNVISVDVVESSGDA-----AYDAAAISM 233
Query: 243 VIKSQAFRLSPSTYKS---WRNITLFFVPSK 270
V KS F P+ R + + F P
Sbjct: 234 VHKSDPFPTPPAALTEDRIERTVPIIFKPPD 264
>gi|146341551|ref|YP_001206599.1| putative TonB-like protein [Bradyrhizobium sp. ORS278]
gi|146194357|emb|CAL78381.1| putative TonB-related protein [Bradyrhizobium sp. ORS278]
Length = 263
Score = 52.6 bits (124), Expect = 6e-05, Method: Composition-based stats.
Identities = 24/220 (10%), Positives = 62/220 (28%), Gaps = 10/220 (4%)
Query: 54 YKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKES 113
++ + + Q + + + + E + + +
Sbjct: 49 AAEVIDVEIAAPKVEQSDEPSSTESAADTAAVATPEQKAEIEQTDLQKGVPTTTEEADQR 108
Query: 114 ALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRI 173
P +++K++ + + + V V + +
Sbjct: 109 VSPTAEKKPTEEEKVAAVETNASEAHTAAEDLTRKTLDVKVPEADRVKATDRGTGKTPDA 168
Query: 174 PSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRR 233
++D + + P K K V++ F +N+ G VL + G +
Sbjct: 169 QTKDWHRRISLEIREKQKYPPGNK-TKGGSVRVTFTINRVGTVLSADVTESSGDED---- 223
Query: 234 MLRENARKAVIKSQAFRLSPSTY---KSWRNITLFFVPSK 270
A + + F P+ + +I + F P+K
Sbjct: 224 -YDRAAVDMIRR-TKFPKPPAKLTDDEFLLSIVVNFPPAK 261
>gi|291289220|ref|YP_003517552.1| putative TonB protein [Klebsiella pneumoniae]
gi|290792182|gb|ADD63507.1| putative TonB protein [Klebsiella pneumoniae]
Length = 226
Score = 52.6 bits (124), Expect = 7e-05, Method: Composition-based stats.
Identities = 23/222 (10%), Positives = 57/222 (25%), Gaps = 23/222 (10%)
Query: 7 LAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKG 66
S++LH + L + F+ ++ +S + + + SS Q
Sbjct: 17 FICSLLLHGLIFLAFIWRFS-EVQPAMSPAPAIMLQWAEIIEAPSSPLSLPVGIAQQESA 75
Query: 67 SSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQ 126
++E + Q+ T + K + ++ +P
Sbjct: 76 VTEEKQQTED-RQQRPVTEDSDATIEITRKKKSSDGEKKKTRPPRKIKAQTSDSNPTAVS 134
Query: 127 KISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRV 186
+ + + + S + V+ +
Sbjct: 135 SNAAPQALVESSRIAAPFNSDSTKRDNSE--------------------ASWESRVKGHL 174
Query: 187 IANWNIPSDFK-RFKKLRVKMHFQLNQKGFVLGKINVDVVGG 227
P D + R + + F +N +G ++ G
Sbjct: 175 NRYKRYPGDARKRARTGTAVVTFTVNTEGTIVSSFLEISSGP 216
>gi|94311608|ref|YP_584818.1| TonB-like protein [Cupriavidus metallidurans CH34]
gi|93355460|gb|ABF09549.1| tolA-related transport transmembrane protein [Cupriavidus
metallidurans CH34]
Length = 360
Score = 52.6 bits (124), Expect = 7e-05, Method: Composition-based stats.
Identities = 30/229 (13%), Positives = 63/229 (27%), Gaps = 8/229 (3%)
Query: 42 DNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRS 101
D E + KK + + E ++ + ++ + A +++
Sbjct: 140 DQAKKEQEKKDQEKKEAQRKEDLRQQQIEAQRKEDAKKKADQERKEAADAKAKAEADQKA 199
Query: 102 SSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKEL 161
+ A ++ + + D +K + A +++ V
Sbjct: 200 KAKADADAKAKADAEQKAKAKADADAKAKRDAAANAQRKSELARLQAMAGGGVSSGGGVG 259
Query: 162 LSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKIN 221
+ + S VR RV N D + + L G +L
Sbjct: 260 SAAGSGAGSGGKASPGYADRVRRRVKPNIIFGGDVEG--NPAAVVSVSLAPDGSLLSARL 317
Query: 222 VDVVGGTELVRRMLRENARKAVIKSQAFRLSPSTYKSWRNITLFFVPSK 270
G ++ +AV +S K+ N T+ F P
Sbjct: 318 TRSSGNSDW-----DNAVLRAVQRSDPLPRDEDG-KAPANFTITFKPKD 360
>gi|86608704|ref|YP_477466.1| TonB family protein [Synechococcus sp. JA-2-3B'a(2-13)]
gi|86557246|gb|ABD02203.1| TonB family protein [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 464
Score = 52.2 bits (123), Expect = 7e-05, Method: Composition-based stats.
Identities = 22/183 (12%), Positives = 47/183 (25%), Gaps = 8/183 (4%)
Query: 74 RDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATN 133
+ E ++ + E SS Q + P P + +
Sbjct: 264 SSAAAVETKSAQISPAQSLKPQPERAASSPEVLPQPYLSAPADPHPTLPSPEPIAAPLEE 323
Query: 134 KEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIP 193
L S + ++ D +A + RV +W +
Sbjct: 324 PSPTLPPTFPTRSHSSSLGRTSGIESSRAGPPSLNATADPDWGDYLAQFQERVRQHWMVR 383
Query: 194 SDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSP 253
+ + +L+++G + +L A+ +S F P
Sbjct: 384 ---RASGSYVTVVQVRLDRQGSLRELRLQTPSED-----PLLDAAVLSAIQRSAPFAPLP 435
Query: 254 STY 256
+Y
Sbjct: 436 ESY 438
>gi|145588464|ref|YP_001155061.1| TonB domain-containing protein [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
gi|145046870|gb|ABP33497.1| Cell division and transport-associated protein TolA
[Polynucleobacter necessarius subsp. asymbioticus
QLW-P1DMWA-1]
Length = 283
Score = 52.2 bits (123), Expect = 7e-05, Method: Composition-based stats.
Identities = 27/268 (10%), Positives = 67/268 (25%), Gaps = 11/268 (4%)
Query: 4 ENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQ 63
+ S+I H+ L L + P + V+ + + + + ++
Sbjct: 26 KRAFTFSLIAHLGLLAFLMIGISWNNSTPAG----VEVELWDSAPQVETPPEPELKTAIK 81
Query: 64 FKGSSQE-NLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
+ + + +T K K + +K + +P
Sbjct: 82 EEAADIALKKKPVEKEPPKKVEAAKETPKPVKPVPPKEKEKPKPVEKVKPVETPKKAEAP 141
Query: 123 YDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIV 182
+ +S A K A++ + + + + V
Sbjct: 142 KKVEAVSPAETKANAAAEKVRADQLARLRAAAGAEGGKGGTVGSGVGGGGNAPPGWTDKV 201
Query: 183 RNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKA 242
+V + + L G +L + G A
Sbjct: 202 IKKVKPLIVFNPESV-SGNPAAVIQVSLAPDGAILSTSILSSSGNASW-----DRAVLLA 255
Query: 243 VIKSQAFRLSPSTYKSWRNITLFFVPSK 270
+ ++++ + R + L F P
Sbjct: 256 LSRAESLPKDDNGKIPQREVKLTFKPKD 283
>gi|327190010|gb|EGE57129.1| TonB family protein [Rhizobium etli CNPAF512]
Length = 436
Score = 52.2 bits (123), Expect = 7e-05, Method: Composition-based stats.
Identities = 19/230 (8%), Positives = 62/230 (26%), Gaps = 7/230 (3%)
Query: 26 NVQLLVPISRREMLSVD-NIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDR 84
Q + +S +++V+ + + + V + + + Q
Sbjct: 193 PAQEVTRVSPETVVAVEPEVLVSQNPAETFVAQPMTTVIPEQPVPDIVPTTAPEQAVTAA 252
Query: 85 FSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFA 144
+ + + S + E + + ++ + ++ + A
Sbjct: 253 VHPEEVQPEEVKPVETAEISPKPEEKPEPKVEKPKPEKKEQSRKKVEPTGGKNGRDRREA 312
Query: 145 EKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKK-LR 203
+ + + V+ R+ + +++R +
Sbjct: 313 TRGVTTGQDAPEFDGMSTAAGRGDGIGSAAVANYPGKVQKRIRRAIRVSDEYRRMGGAIS 372
Query: 204 VKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSP 253
V++ ++ G + G + L + A V ++ F P
Sbjct: 373 VRLSLTIDGTGRLSAVSVAGSSGIPD-----LDKAALDGVRRAAPFPPLP 417
>gi|148254958|ref|YP_001239543.1| putative energy transducer TonB [Bradyrhizobium sp. BTAi1]
gi|146407131|gb|ABQ35637.1| outer membrane transport energization protein TonB [Bradyrhizobium
sp. BTAi1]
Length = 269
Score = 52.2 bits (123), Expect = 7e-05, Method: Composition-based stats.
Identities = 27/248 (10%), Positives = 65/248 (26%), Gaps = 23/248 (9%)
Query: 8 AISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGS 67
++ LH+ L +F V +I +
Sbjct: 27 VAAVALHLGGAALALTSFKNDEDAGGLGAAGAEVIDIDMGS---------PKVDNDEVPV 77
Query: 68 SQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQK 127
Q+ +++ + + + + + T + + + +
Sbjct: 78 GQDAPLQNAAPEMQEQKAEVEQTDLPKDVPTTTEEADREVTTSDVKKPTEEQKVATVQTQ 137
Query: 128 ISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVI 187
S+A Q+ S +K P+ + + + +
Sbjct: 138 ASEAQESSQESARKSLDDKAPESEKTKAPNVGIGKDRD-------KLTANWGRKISAYFE 190
Query: 188 ANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQ 247
+ P+ K +L+ + LN+ G V+ + G E + A V +S
Sbjct: 191 LHKKYPAGRKSAAQLK--LSVLLNRLGRVVTVDVKESSGDAE-----FDQAAIAMVRRSD 243
Query: 248 AFRLSPST 255
P+
Sbjct: 244 PVPRPPAG 251
>gi|121609155|ref|YP_996962.1| TonB family protein [Verminephrobacter eiseniae EF01-2]
gi|121553795|gb|ABM57944.1| TonB family protein [Verminephrobacter eiseniae EF01-2]
Length = 287
Score = 52.2 bits (123), Expect = 7e-05, Method: Composition-based stats.
Identities = 24/228 (10%), Positives = 56/228 (24%), Gaps = 4/228 (1%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
L+ L IS+ +H L + + + + L V + + +
Sbjct: 13 LQLALGISVTVHAALLSVRFIDPEGVSRMFQDLP--LEVILVNAKSNERPDKAQAIAQTA 70
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
G + + + + A L +P +
Sbjct: 71 LAGGGAADQGRASSPLPYSALTAVGDDFEQTQRKVDALQQQQAQLLAQLRQQLASLPATD 130
Query: 123 YDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIV 182
+ ++ + F + + + + + + + +
Sbjct: 131 PRQSDEQAGAPVDEPAKRQQFVKLLAEIEKRINEENARPKKRYISPATREEVYAVYYDAL 190
Query: 183 RNRVIANWNIPSDFKRFKKL--RVKMHFQLNQKGFVLGKINVDVVGGT 228
R +V + KL + M +N G VL V G
Sbjct: 191 RRKVEDKGTENFPEQGGHKLYGELTMIVTVNYDGQVLATEVVQGSGNA 238
>gi|83954606|ref|ZP_00963317.1| TonB like protein [Sulfitobacter sp. NAS-14.1]
gi|83840890|gb|EAP80061.1| TonB like protein [Sulfitobacter sp. NAS-14.1]
Length = 271
Score = 52.2 bits (123), Expect = 7e-05, Method: Composition-based stats.
Identities = 25/249 (10%), Positives = 60/249 (24%), Gaps = 11/249 (4%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
G +S+ +H + L P + + I + +
Sbjct: 16 GAGLSIGVHGALVALWLT--QAAAYEPPEEAGIQGRELIDLAEVEMIMAAPETDLPDGPP 73
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
+ + + +E +D K +E + +
Sbjct: 74 AEDSQATLESPAEREEAKASNDPLLAQIPHTPDDPELQFKIANPDQEVDTDKEATETPTE 133
Query: 126 QKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNR 185
+ + D K++ L+ E++ +A+ +
Sbjct: 134 LQEETENENAAQSTAAAPKASAGQDEQDQSAAKEQGLTDAERAEITDWQKSLVLALNAAK 193
Query: 186 VIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIK 245
+ + + F L+Q G + + G +L + A +
Sbjct: 194 DYPRRAREARAEG----TTTVAFTLDQYGQIKAREVSKSSG-----WPVLDQAALDIFDR 244
Query: 246 SQAFRLSPS 254
Q PS
Sbjct: 245 LQTLPRPPS 253
>gi|292491866|ref|YP_003527305.1| TonB family protein [Nitrosococcus halophilus Nc4]
gi|291580461|gb|ADE14918.1| TonB family protein [Nitrosococcus halophilus Nc4]
Length = 260
Score = 52.2 bits (123), Expect = 7e-05, Method: Composition-based stats.
Identities = 28/254 (11%), Positives = 65/254 (25%), Gaps = 23/254 (9%)
Query: 1 MRLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP 60
+R G+ +++ LHV +N P+S + ++ +
Sbjct: 10 VRWGLGVFLAVGLHVG-AAFGVIVWNATRTPPLSPPPAMMIELAAVPVAPPPQPNNAPPE 68
Query: 61 VVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPV 120
Q K + E + E + K +
Sbjct: 69 PKQEKVEPPPPEPEPEPLPEKVEPPPPPKPKVKPEVALPKPPPPKPRPKQPQQPQPIEEK 128
Query: 121 SPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIA 180
+P + EQ + Q
Sbjct: 129 TPPPEPVSKPPAPAEQSPPAPKAKAPAPSASSAQVRKT----------------VQTWQQ 172
Query: 181 IVRNRVIANWNIPSDFKRFKKLRVK-MHFQLNQKGFVLGKINVDVVGGTELVRRMLRENA 239
++ + + PS +R ++ V + F ++++G VL G +L +
Sbjct: 173 LLLAHIERHKRYPSSARRRRQEGVTYLRFVMDREGQVLSARIERSSG-----YTLLDKET 227
Query: 240 RKAVIKSQAFRLSP 253
+ + ++ + P
Sbjct: 228 QALIERAAPLPVPP 241
>gi|78189864|ref|YP_380202.1| hypothetical protein Cag_1909 [Chlorobium chlorochromatii CaD3]
gi|78172063|gb|ABB29159.1| Cell division and transport-associated protein TolA [Chlorobium
chlorochromatii CaD3]
Length = 314
Score = 52.2 bits (123), Expect = 8e-05, Method: Composition-based stats.
Identities = 26/237 (10%), Positives = 60/237 (25%), Gaps = 10/237 (4%)
Query: 23 FNFNVQLLVPISRREMLSVDNIYNEDYHS-SKYKKIEEPVVQFKGSSQENLVRDFSVQEN 81
+ + + + S + V +S V + +
Sbjct: 63 VGSAAVPAPTLEAPQQVPAEQAKEASVVKGSPSAVPTKVPVATPPASTTKKVPEAQPVVD 122
Query: 82 GDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGI 141
+ +Q + K +S S + L S ++K K +
Sbjct: 123 RQQQMNQALERLKQKVGKSASPSVTASPSAAPSPLAPSSSNSLTNALAKLQAKVKASGQA 182
Query: 142 SFAEKKSIDTVVVRPDKKEL----LSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFK 197
+ + + K S+ S A V + + NW +
Sbjct: 183 TTSAPSTTSPTTSPTAKSGGNIAAASRTTGSGSGSGSPASYKAEVASIIQNNWAFSNPML 242
Query: 198 RFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPS 254
R + + + + G + + L + ++A+ KS + P
Sbjct: 243 RGEGMEAYVRIHVLPNGTISQIVFDRR-----AASEYLNNSIKRALEKSSPLPVIPQ 294
>gi|194290408|ref|YP_002006315.1| membrane spanning protein in tola-tolq-tolr complex; inner membrane
associated component [Cupriavidus taiwanensis LMG 19424]
gi|193224243|emb|CAQ70252.1| membrane spanning protein in TolA-TolQ-TolR complex; inner membrane
associated component [Cupriavidus taiwanensis LMG 19424]
Length = 371
Score = 52.2 bits (123), Expect = 8e-05, Method: Composition-based stats.
Identities = 27/224 (12%), Positives = 61/224 (27%), Gaps = 8/224 (3%)
Query: 47 EDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKG 106
++ + ++ E + + Q+ ++ + K A ++ +
Sbjct: 156 KEADRKEAERREAERKEAQRKEDAKKKAAQQEQDRKEQAERERKEAAEAKAKAQADAKAK 215
Query: 107 EQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVE 166
QA ++ + D + + + A +++ +
Sbjct: 216 AQADAKAKAQADAKAKADAEAKANREAAANAQRKSELARLQALAGGSGAGGGGVGNAAGA 275
Query: 167 KSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVG 226
+ S VR RV N D + QL G +L G
Sbjct: 276 GAGGGGKASPGYADRVRRRVKPNIVFTEDVPG--NPTAVVSVQLAPDGSLLSARLSKSSG 333
Query: 227 GTELVRRMLRENARKAVIKSQAFRLSPSTYKSWRNITLFFVPSK 270
+ +AV +S + K+ + T+ F P
Sbjct: 334 NSGW-----DNAVLRAVERSDPLPRDENG-KAPASFTITFRPKD 371
>gi|188994538|ref|YP_001928790.1| hypothetical protein PGN_0674 [Porphyromonas gingivalis ATCC 33277]
gi|188594218|dbj|BAG33193.1| conserved hypothetical protein [Porphyromonas gingivalis ATCC
33277]
Length = 275
Score = 52.2 bits (123), Expect = 8e-05, Method: Composition-based stats.
Identities = 23/220 (10%), Positives = 61/220 (27%), Gaps = 5/220 (2%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDN-IYNEDYHSSKYKKIEEPVVQF 64
+A+S+ HV + LL F +++ E++ V+ I + + E
Sbjct: 12 AIAVSVGAHVALIALL-FVLHLRAAPREEPEELILVNFGITELSSGAFEPAPQETASNPD 70
Query: 65 KGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYD 124
+ Q + V++ + + ++A +
Sbjct: 71 VQTEQTPTQKQPVVKKQQAPAESDLRQDVEPAPHLAKAEKARQEAEMKRKREAEEARKRA 130
Query: 125 KQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRN 184
+ ++ + + ++ + +
Sbjct: 131 EAAAEAERKRKAEAGKAINNNVAGAFGRGAEQGNTQGSGTQANGNQGNPGGSGSSYSLTG 190
Query: 185 R-VIANWNIPSDFKRFKKLR--VKMHFQLNQKGFVLGKIN 221
R ++ N P + K +R V+++ +N G V
Sbjct: 191 RTIVGNGGYPEKPRYSKPIRGTVRVNIVVNNAGRVTDASI 230
>gi|62290543|ref|YP_222336.1| TonB-dependent receptor [Brucella abortus bv. 1 str. 9-941]
gi|82700458|ref|YP_415032.1| ATP/GTP-binding domain-containing protein [Brucella melitensis
biovar Abortus 2308]
gi|148560330|ref|YP_001259524.1| TonB protein [Brucella ovis ATCC 25840]
gi|189024763|ref|YP_001935531.1| TonB-dependent receptor [Brucella abortus S19]
gi|237816047|ref|ZP_04595043.1| TonB family C-terminal domain-containing protein [Brucella abortus
str. 2308 A]
gi|254689840|ref|ZP_05153094.1| TonB-dependent receptor [Brucella abortus bv. 6 str. 870]
gi|254694332|ref|ZP_05156160.1| TonB-dependent receptor [Brucella abortus bv. 3 str. Tulya]
gi|254697988|ref|ZP_05159816.1| TonB-dependent receptor [Brucella abortus bv. 2 str. 86/8/59]
gi|254730874|ref|ZP_05189452.1| TonB-dependent receptor [Brucella abortus bv. 4 str. 292]
gi|256258093|ref|ZP_05463629.1| TonB-dependent receptor [Brucella abortus bv. 9 str. C68]
gi|260547210|ref|ZP_05822948.1| TonB-dependent receptor [Brucella abortus NCTC 8038]
gi|260755373|ref|ZP_05867721.1| TonB-dependent receptor [Brucella abortus bv. 6 str. 870]
gi|260758594|ref|ZP_05870942.1| TonB-dependent receptor [Brucella abortus bv. 4 str. 292]
gi|260762426|ref|ZP_05874763.1| TonB-dependent receptor [Brucella abortus bv. 2 str. 86/8/59]
gi|260884389|ref|ZP_05896003.1| TonB [Brucella abortus bv. 9 str. C68]
gi|261214640|ref|ZP_05928921.1| TonB-dependent receptor [Brucella abortus bv. 3 str. Tulya]
gi|62196675|gb|AAX74975.1| TonB-dependent receptor [Brucella abortus bv. 1 str. 9-941]
gi|82616559|emb|CAJ11637.1| ATP/GTP-binding site motif A (P-loop):Proline-rich
extensin:Gram-negative bacterial tonB protein:TonB,
C-terminal [Brucella melitensis biovar Abortus 2308]
gi|148371587|gb|ABQ61566.1| TonB protein [Brucella ovis ATCC 25840]
gi|189020335|gb|ACD73057.1| TonB-dependent receptor [Brucella abortus S19]
gi|237788710|gb|EEP62922.1| TonB family C-terminal domain-containing protein [Brucella abortus
str. 2308 A]
gi|260095575|gb|EEW79453.1| TonB-dependent receptor [Brucella abortus NCTC 8038]
gi|260668912|gb|EEX55852.1| TonB-dependent receptor [Brucella abortus bv. 4 str. 292]
gi|260672852|gb|EEX59673.1| TonB-dependent receptor [Brucella abortus bv. 2 str. 86/8/59]
gi|260675481|gb|EEX62302.1| TonB-dependent receptor [Brucella abortus bv. 6 str. 870]
gi|260873917|gb|EEX80986.1| TonB [Brucella abortus bv. 9 str. C68]
gi|260916247|gb|EEX83108.1| TonB-dependent receptor [Brucella abortus bv. 3 str. Tulya]
Length = 283
Score = 52.2 bits (123), Expect = 8e-05, Method: Composition-based stats.
Identities = 27/232 (11%), Positives = 64/232 (27%), Gaps = 12/232 (5%)
Query: 11 MILHVMFLLLLYFNFNVQLLVPI-SRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQ 69
+++H + + P + + V+ + + + + E +
Sbjct: 38 LLVHAA--GAYVIHMAQEDNQPEGTEVAAMVVELVPDLVAPAEERVSEEVQPETTTEQPE 95
Query: 70 ENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKIS 129
E + + Q E + K E E + P K K +
Sbjct: 96 EVQPEPEPEPQPEAKAEPQQVQEPEEVIPDVVEAQKPEPKKVEKLKPQKPKPEKVKPKKA 155
Query: 130 KATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIAN 189
+ + ++ K + E S+ + + +++ + N
Sbjct: 156 EKAAETREASAPRVD--------ADNGAKVAASKRGETSASAGVIWAKWTSRLQSHMARN 207
Query: 190 WNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARK 241
R + + F ++ G VL G + + L E AR+
Sbjct: 208 ARFLQGKSRNTRGEAHVAFVIDPSGNVLSARIAVSSGDPAVDQLAL-EAARR 258
>gi|330950603|gb|EGH50863.1| tolA protein [Pseudomonas syringae Cit 7]
Length = 356
Score = 52.2 bits (123), Expect = 8e-05, Method: Composition-based stats.
Identities = 33/343 (9%), Positives = 87/343 (25%), Gaps = 89/343 (25%)
Query: 10 SMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKG--- 66
++ LH++ +L+ +F + +P ++ ++ + + + ++ + K
Sbjct: 20 AVALHILIFGMLFVSFAMTPDLPEAKP-IVQATLYQLKSKSQATTQTNQKIAGEAKKTAA 78
Query: 67 ---------------------SSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSK 105
+ E + + + + +D+ K + E + +
Sbjct: 79 RQTEVEQLEQKKIEQQKQEAVKAAEQKKEEAAQKAEEQKAADEAKKAEQKAEEAKKADDA 138
Query: 106 GEQALKESALLRMPVSPYDKQKISKATNKEQ----------------------------- 136
+ + + + I+K +E+
Sbjct: 139 KKADEAKKVADAKKLEEKQQADIAKKKAEEEAKKKAEEDAKKAAAEEAKKQAADEAKKKA 198
Query: 137 ------------------------DLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKR 172
AE K + K + R
Sbjct: 199 AEDAKKKAAEDAKKKAAADSAKKAQEAARKSAEDKKAQALADLLSDKPERQQALADERGD 258
Query: 173 IPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVR 232
+ ++R R W+ P + + V + + G + G
Sbjct: 259 ETAGSFDDLIRVRASEGWSRPPSAR--NNMSVTLQIGMLPDGTIASVSIAKSSGDG---- 312
Query: 233 RMLRENARKAVIKSQAFR----LSPSTYKSWRNITLFFVPSKM 271
+A AV L P+ + +R+ + F P +
Sbjct: 313 -PFDSSAVAAVKNIGRLTEMQGLKPADFAPYRSFKMTFTPGDL 354
>gi|227328242|ref|ZP_03832266.1| TonB-like protein [Pectobacterium carotovorum subsp. carotovorum
WPP14]
Length = 324
Score = 52.2 bits (123), Expect = 8e-05, Method: Composition-based stats.
Identities = 22/248 (8%), Positives = 59/248 (23%), Gaps = 16/248 (6%)
Query: 7 LAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKG 66
+S + H L+F + I + ++ ++ ++ + + +
Sbjct: 49 FVLSCVAHAAL--ALFFLLHSSPKESIEDMAGNAGGSMQVTMMAAAMAQQADSSLPTEES 106
Query: 67 SSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQ 126
S + E + + A K + +
Sbjct: 107 SDPPVVATQTVSLEQPISPPLPEHPNPVIKQPVIERKPVTPVAEKRPPVREKKQPEKKPE 166
Query: 127 KISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVR--- 183
K ++ Q + + T + + +
Sbjct: 167 SKPKEQQQQATQQQTEKKSESPVATNQTGDAPSLMQASAGMPGSAATAKAGESDSGQAAR 226
Query: 184 ----------NRVIANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKINVDVVGGTELVR 232
+ N PS K + +V++ F + G V +
Sbjct: 227 GAGKSNSQNFRALHRRVNYPSRAKALGVEGKVRVKFDITGSGTVTNVQILSETPDGVFGD 286
Query: 233 RMLRENAR 240
++++ AR
Sbjct: 287 DVMKDMAR 294
>gi|17545453|ref|NP_518855.1| TOLA-like transport transmembrane protein [Ralstonia solanacearum
GMI1000]
gi|17427745|emb|CAD14264.1| probable tola-related transport transmembrane protein [Ralstonia
solanacearum GMI1000]
Length = 345
Score = 52.2 bits (123), Expect = 8e-05, Method: Composition-based stats.
Identities = 25/205 (12%), Positives = 59/205 (28%), Gaps = 7/205 (3%)
Query: 46 NEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSK 105
++ + + ++ E + + ++ + K + + + + ++
Sbjct: 128 LKEQKAQQARQAELQKRALAEQLAQQAKERQAHEKAVAAEAQARKDAQLKAQAEAKAKAE 187
Query: 106 GEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKV 165
E K A+ +Q+ ++A + Q + + +
Sbjct: 188 AEARQKAKAVAEAKAKADAEQRAAQARSNAQRQARLRDLQALAGTAGATGAAAGSGGGVG 247
Query: 166 EKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVV 225
+ S VR +V N N D V + Q+ G VL +
Sbjct: 248 SGTGAGGTASAGYADRVRAKVQPNINFYDDTSG--NPIVTVLVQMAPDGTVLSRRVTKPS 305
Query: 226 GGTELVRRMLRENARKAVIKSQAFR 250
G +L E +A+ S
Sbjct: 306 G-----YPVLDEAVLRAIDLSSPLP 325
>gi|289674676|ref|ZP_06495566.1| tolA protein [Pseudomonas syringae pv. syringae FF5]
gi|330896133|gb|EGH28354.1| tolA protein [Pseudomonas syringae pv. japonica str. M301072PT]
gi|330975322|gb|EGH75388.1| tolA protein [Pseudomonas syringae pv. aptata str. DSM 50252]
Length = 356
Score = 52.2 bits (123), Expect = 8e-05, Method: Composition-based stats.
Identities = 33/343 (9%), Positives = 87/343 (25%), Gaps = 89/343 (25%)
Query: 10 SMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKG--- 66
++ LH++ +L+ +F + +P ++ ++ + + + ++ + K
Sbjct: 20 AVALHILIFGMLFVSFAMTPDLPEAKP-IVQATLYQLKSKSQATTQTNQKIAGEAKKTAA 78
Query: 67 ---------------------SSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSK 105
+ E + + + + +D+ K + E + +
Sbjct: 79 RQTEVEQLEQKKIEQQKQEAVKAAEQKKEESAQKAEEQKAADEAKKAEQKAEEAKKADDA 138
Query: 106 GEQALKESALLRMPVSPYDKQKISKATNKEQ----------------------------- 136
+ + + + I+K +E+
Sbjct: 139 KKADEAKKVADAKKLEDKQQADIAKKKAEEEAKKKAEEDAKKAAAEEAKKQAADEAKKKA 198
Query: 137 ------------------------DLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKR 172
AE K + K + R
Sbjct: 199 AEDAKKKAAEDAKKKAAADSAKKAQEAARKSAEDKKAQALADLLSDKPERQQALADERGD 258
Query: 173 IPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVR 232
+ ++R R W+ P + + V + + G + G
Sbjct: 259 ETAGSFDDLIRVRASEGWSRPPSAR--NNMSVTLQIGMLPDGTIASVSIAKSSGDG---- 312
Query: 233 RMLRENARKAVIKSQAFR----LSPSTYKSWRNITLFFVPSKM 271
+A AV L P+ + +R+ + F P +
Sbjct: 313 -PFDSSAVAAVKNIGRLTEMQGLKPADFAPYRSFKMTFTPGDL 354
>gi|86138573|ref|ZP_01057146.1| Putative TonB protein [Roseobacter sp. MED193]
gi|85824633|gb|EAQ44835.1| Putative TonB protein [Roseobacter sp. MED193]
Length = 286
Score = 52.2 bits (123), Expect = 9e-05, Method: Composition-based stats.
Identities = 27/235 (11%), Positives = 57/235 (24%), Gaps = 13/235 (5%)
Query: 35 RREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHAT 94
++N E + LV +E DQ+
Sbjct: 60 PPPRRQMENPELEQPLTPPDAPQMPEFELADAPRAAVLVALKEPEEADVVEIDQSTPPPP 119
Query: 95 ENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVV 154
+ + P + Q G +
Sbjct: 120 PPPEPEPEPEPEPKPEPKPRPKPAPKPVESPPTAQTSN---QTSPGRAAQRAAGSGGGAQ 176
Query: 155 RPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKG 214
+ + ++ A +R+R+ P+ + RV + + G
Sbjct: 177 AGAAGGASTATISAGQRAKLQSIWGAKIRSRIERRKRYPAGARGSG--RVVLRITVAASG 234
Query: 215 FVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPSTYKSWR---NITLFF 266
++ G + A KAV ++ F +P Y + + N+ + F
Sbjct: 235 ALVNYRVARSSG-----VAAFDQAALKAVARAGKFPKAPKGYDAAQLTFNLPMNF 284
>gi|87308192|ref|ZP_01090334.1| hypothetical protein DSM3645_21382 [Blastopirellula marina DSM
3645]
gi|87289274|gb|EAQ81166.1| hypothetical protein DSM3645_21382 [Blastopirellula marina DSM
3645]
Length = 1096
Score = 51.8 bits (122), Expect = 9e-05, Method: Composition-based stats.
Identities = 22/193 (11%), Positives = 54/193 (27%), Gaps = 14/193 (7%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYN--------------ED 48
+ G+ +S+IL ++ L L+ LV + + E ++ D
Sbjct: 81 IRRGIQLSIILSLIMHLSLFVGMVALDLVSVPQGEDVAATRRQARRDPVILPDYHPSQWD 140
Query: 49 YHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQ 108
+ + E+PV + + V + +Q ++
Sbjct: 141 STNETQQDYEKPVEADEAQPDQKEVERRQIDPKQPSRENQPTVDPEMEREATPNTPTKVA 200
Query: 109 ALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKS 168
+++ + P + S + E+ S +S+ + S
Sbjct: 201 RQEQAPAETLQQMPSKLSRNSAEMETPKQQPEQIEVERSSDPQQPQTSAAVAEMSRQQNS 260
Query: 169 SRKRIPSQDAIAI 181
+ + A
Sbjct: 261 ATQSRQESQIEAA 273
>gi|302381976|ref|YP_003817799.1| hypothetical protein Bresu_0862 [Brevundimonas subvibrioides ATCC
15264]
gi|302192604|gb|ADL00176.1| hypothetical protein Bresu_0862 [Brevundimonas subvibrioides ATCC
15264]
Length = 67
Score = 51.8 bits (122), Expect = 9e-05, Method: Composition-based stats.
Identities = 8/47 (17%), Positives = 20/47 (42%), Gaps = 1/47 (2%)
Query: 206 MHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLS 252
M L+ G ++ + ++ V R + A +A+ ++ F +
Sbjct: 1 MDVTLSADGRIVSGPTLRNSR-SDSVYRAAADGALRAIRQTAPFDVP 46
>gi|86748780|ref|YP_485276.1| TonB-like protein [Rhodopseudomonas palustris HaA2]
gi|86571808|gb|ABD06365.1| TonB-like protein [Rhodopseudomonas palustris HaA2]
Length = 279
Score = 51.8 bits (122), Expect = 9e-05, Method: Composition-based stats.
Identities = 23/208 (11%), Positives = 48/208 (23%), Gaps = 6/208 (2%)
Query: 48 DYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGE 107
+ G + + + ET
Sbjct: 60 ELAPLAVAPDVPQQDLPPGPLLAEAQPEAEPEPETPVEEKVQEIEPKPEETSIEPPPAPV 119
Query: 108 QALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEK 167
P K + K ++ K + + +
Sbjct: 120 MPSAAVLPPPPKPKPEKKPQPKKKRAADRTKPINPDQPKMTQTSAPPSAQLERSDQMAAP 179
Query: 168 SSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKL-RVKMHFQLNQKGFVLGKINVDVVG 226
+ +PS ++A R ++A+ N F + + F +++ G V V G
Sbjct: 180 RAGAAMPSAASVASWRGSLMAHLNRHKRFPPGGGMGTASVAFSIDRSGQVRSARLVGSSG 239
Query: 227 GTELVRRMLRENARKAVIKSQAFRLSPS 254
L A V ++ P+
Sbjct: 240 DA-----ALDAEAVSLVRRASPVPPPPA 262
>gi|34540439|ref|NP_904918.1| hypothetical protein PG0633 [Porphyromonas gingivalis W83]
gi|34396752|gb|AAQ65817.1| hypothetical protein PG_0633 [Porphyromonas gingivalis W83]
Length = 275
Score = 51.8 bits (122), Expect = 9e-05, Method: Composition-based stats.
Identities = 23/220 (10%), Positives = 61/220 (27%), Gaps = 5/220 (2%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDN-IYNEDYHSSKYKKIEEPVVQF 64
+A+S+ HV + LL F +++ E++ V+ I + + E
Sbjct: 12 AIAVSVGAHVALITLL-FVLHLRAAPREEPEELILVNFGITELSSGAFEPAPQETASNPD 70
Query: 65 KGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYD 124
+ Q + V++ + + ++A +
Sbjct: 71 VQTEQTPTQKQPVVKKQQAPAESDLRQDVEPAPHLAKAEKARQEAEMKRKREAEEARKRA 130
Query: 125 KQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRN 184
+ ++ + + ++ + +
Sbjct: 131 EAAAEAERKRKAEAGKAINNNVAGAFGRGAEQGNTQGSGTQANGNQGNPGGSGSSYSLTG 190
Query: 185 R-VIANWNIPSDFKRFKKLR--VKMHFQLNQKGFVLGKIN 221
R ++ N P + K +R V+++ +N G V
Sbjct: 191 RTIVGNGGYPEKPRYSKPIRGTVRVNIVVNNAGRVTDASI 230
>gi|238764058|ref|ZP_04625013.1| hypothetical protein ykris0001_15580 [Yersinia kristensenii ATCC
33638]
gi|238697729|gb|EEP90491.1| hypothetical protein ykris0001_15580 [Yersinia kristensenii ATCC
33638]
Length = 272
Score = 51.8 bits (122), Expect = 9e-05, Method: Composition-based stats.
Identities = 25/250 (10%), Positives = 63/250 (25%), Gaps = 31/250 (12%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
L + LH M +L + ++ + ++ + S+ +
Sbjct: 33 SLLFGLGLH-MLAAVLMLGWINKMAPQGVLPPAVMIELTLYQQAKSAPRDIPQG------ 85
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
E + K + K + +R K
Sbjct: 86 ------------------LQQSMAAPDDAPPEKRPEELPKLTGSPKGTHAIRPEKVVQKK 127
Query: 126 QKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNR 185
+ + L ++ + + K + +S + V
Sbjct: 128 KIAPTKPRTDTPLPVVAEKAAPTTSAPLPGDSHKNAATFSSVASAAISGKASWQSEVLAH 187
Query: 186 VIANWNIPSDF-KRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVI 244
+ P + + + + F ++ +G VL G ++L A +
Sbjct: 188 LSRYKRYPREALRYRLEGISHVRFVVDHQGKVLTAELFTSSGA-----KILDHEAMALIS 242
Query: 245 KSQAFRLSPS 254
++Q P+
Sbjct: 243 RAQPLPTPPA 252
>gi|218516343|ref|ZP_03513183.1| putative signal peptide protein [Rhizobium etli 8C-3]
Length = 129
Score = 51.8 bits (122), Expect = 9e-05, Method: Composition-based stats.
Identities = 15/82 (18%), Positives = 36/82 (43%)
Query: 156 PDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGF 215
E + + S + +R+ + + + + K +R+ +H +L + G
Sbjct: 30 DANAEAADRRNSDANSPRISVAEVQALRDAIERQYFVDNRLKDIDSVRLTIHIKLARDGQ 89
Query: 216 VLGKINVDVVGGTELVRRMLRE 237
++G +V V GG+E ++ L +
Sbjct: 90 IVGNPDVQVTGGSERAQKSLTD 111
>gi|86358864|ref|YP_470756.1| putative membrane protein, transduces energy to outer membrane
receptors [Rhizobium etli CFN 42]
gi|86282966|gb|ABC92029.1| putative membrane protein, transduces energy to outer membrane
receptors [Rhizobium etli CFN 42]
Length = 441
Score = 51.8 bits (122), Expect = 9e-05, Method: Composition-based stats.
Identities = 14/198 (7%), Positives = 47/198 (23%), Gaps = 3/198 (1%)
Query: 42 DNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRS 101
+ + +E + + VV + ++Q + + +
Sbjct: 220 EVLVSESPAETSVAQPMSTVVPEQPVMSSESPTAAAMQPEPEEIKPVEVAPVSPEPEPPT 279
Query: 102 SSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKEL 161
+ K + V + + + A + + D
Sbjct: 280 EVVTPQPKPKLEKPVEKKVVERKQPPKKA---QGSEGDAKQEARRGAADGQADANSNDNS 336
Query: 162 LSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKIN 221
+ ++ + + R+ + R + + +++ G +
Sbjct: 337 RTSGGRNGAGGASEANYKGKLVARLFRCVDRMESRYRAAPATLTVRITVSRSGDITASSV 396
Query: 222 VDVVGGTELVRRMLRENA 239
+ E+ L A
Sbjct: 397 IRGSRLPEVDSAALARVA 414
Score = 38.3 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 16/180 (8%), Positives = 44/180 (24%), Gaps = 3/180 (1%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRR-EMLSVDNIYNEDYHSSKYKKIEEP 60
R+ S+I H L + E +SV + + D S E
Sbjct: 97 RVALSCVCSLIFHATLAATLLIVMPAPSDETLMEAGEAISVVMLGSSDADQSAAGDTEVT 156
Query: 61 VVQFKGSS--QENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRM 118
+ + + + V+ E + E + + + + +
Sbjct: 157 IQEEVVPEAVEPDTVKPVETAEVQPEVVQPETVQPADAEPVETVQPVKDVTRQSAETVAT 216
Query: 119 PVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDA 178
+ T+ Q + + + + +++ + +
Sbjct: 217 AEPEVLVSESPAETSVAQPMSTVVPEQPVMSSESPTAAAMQPEPEEIKPVEVAPVSPEPE 276
>gi|258592820|emb|CBE69129.1| protein of unknown function [NC10 bacterium 'Dutch sediment']
Length = 312
Score = 51.8 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 31/293 (10%), Positives = 74/293 (25%), Gaps = 41/293 (13%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSV-------------DNIYNED 48
++ N + +S++ H++F+ L+ +P R + + D
Sbjct: 8 QIRNFIVVSLLAHLVFIGLIS-AMQRSAGLPTDRPLQVRIVDRSIRTRAVPVPDRRTLRT 66
Query: 49 YHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQ 108
+ +++ ++ +Q +S R S + +
Sbjct: 67 TTARAHRRTKQAGLQKAQASSRRFRRLASASSRRTVTPPAVSAATVRPHAPSAYQTALTP 126
Query: 109 ALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAE-------------KKSIDTVVVR 155
K + E + G+ + K
Sbjct: 127 WTPPPLRTLQGADAAPGPKAAHVEPLEGEGVGVGGSTRPSNLRGQMAMLWKSLDAGQYPG 186
Query: 156 PDKKELLSKVEKSSRKRIPS--------QDAIAIVRNRVIANWNIPSDFKRFKKLRVKMH 207
S+ S + +V+ R+ W+ P D + + +
Sbjct: 187 QATDTGDEGDTGSATGPTVSLDSQDSRFASYLMVVKRRIERVWSYPPDARGLTGNLI-IT 245
Query: 208 FQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPSTYKSWR 260
F + + G + G L A +A+ + F + R
Sbjct: 246 FGITRDGRLSDLQLTQTSG-----LAPLDNEAIRAIRLANPFGPFSEQMRFER 293
>gi|325981319|ref|YP_004293721.1| protein TolA [Nitrosomonas sp. AL212]
gi|325530838|gb|ADZ25559.1| protein TolA [Nitrosomonas sp. AL212]
Length = 314
Score = 51.8 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/296 (9%), Positives = 81/296 (27%), Gaps = 45/296 (15%)
Query: 13 LHVMFLLLLYFNFNVQLLVPISRREMLSVDN---IYNEDYHSSKYKKIEEPVVQFKGSSQ 69
+H++F+ LL F N + P + + + ++I+ K +
Sbjct: 26 VHLIFIALLIFGLNWKDQPPEGMMVEIWTELPTPVQEPVKTQLPPQQIKPAPEPVKPKPE 85
Query: 70 ENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESAL-------------- 115
+ V+ + + Q + + + + +KE
Sbjct: 86 PEPPKPEPVKPEPAKPAPQQAAVTPPVKKPDITIQQKPEPIKEIKPDLEQQKKQEQEKLK 145
Query: 116 -------------------LRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRP 156
L ++++ K + + + +++
Sbjct: 146 ELEKQKELEKKKELEKQKELEKQKELAKQKELEKQKELLKQKELAAQQQREQAAKAQREA 205
Query: 157 DKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFV 216
+ + + ++ A++ ++ + +P D + L G +
Sbjct: 206 EAQRAAQQAAARNQITNEISKYKALILAKIRSRIVMPPDLPG--NPIAEFSVTLLPGGDI 263
Query: 217 LGKINVDVVGGTELVRRMLRENARKAVIKSQ--AFRLSPSTYKSWRNITLFFVPSK 270
L G + +A+ S+ P+ + +RN+ + +
Sbjct: 264 LDVRLSKSSG-----YAVFDNAVERAIYLSKPLPLPPDPALFNEFRNLNITVHYRE 314
>gi|83944055|ref|ZP_00956512.1| TonB like protein [Sulfitobacter sp. EE-36]
gi|83845302|gb|EAP83182.1| TonB like protein [Sulfitobacter sp. EE-36]
Length = 271
Score = 51.8 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/249 (10%), Positives = 60/249 (24%), Gaps = 11/249 (4%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
G +S+ +H + L P + + I + +
Sbjct: 16 GAGLSIGVHGALVALWLT--QAAAYEPPEEAGIQGRELIDLAEVEMIMAAPETDLPDGPP 73
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
+ + + +E +D K +E + +
Sbjct: 74 AEDSQATLESPAEREEAKASNDPLLAQIPHTPDDPELQFKIANPDQEVDTDKEATETPTE 133
Query: 126 QKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNR 185
+ + D K++ L+ E++ +A+ +
Sbjct: 134 LQEETENENAAQSTAAAPKASAGQDEQDQSAAKEQGLTDAERAEITDWQKSLVLALNAAK 193
Query: 186 VIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIK 245
+ + + F L+Q G + + G +L + A +
Sbjct: 194 DYPRRAREARAEG----TTTVAFTLDQYGQIKAREVSKSSG-----WPVLDQAALDIFDR 244
Query: 246 SQAFRLSPS 254
Q PS
Sbjct: 245 LQTLPRPPS 253
>gi|188990574|ref|YP_001902584.1| TolA protein [Xanthomonas campestris pv. campestris str. B100]
gi|167732334|emb|CAP50526.1| TolA protein [Xanthomonas campestris pv. campestris]
Length = 345
Score = 51.8 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/256 (10%), Positives = 73/256 (28%), Gaps = 15/256 (5%)
Query: 24 NFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQ---E 80
+ +P R + ++ K+++ V S+E ++ + E
Sbjct: 95 SVPPPQPIPELRPQDAPTQQQAQAQERVAQPDKVDQDKVDALAISEEKAKQEQEAKRRQE 154
Query: 81 NGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQ------KISKATNK 134
D + + A + + + K++A + + +K+ + +A +
Sbjct: 155 QIDLTERKRQEEAEQKLRLAKQQEEEDAKKKQAAAQQAAQAEREKKIADIRRQREQADKE 214
Query: 135 EQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPS 194
+ + + + S A ++ +V+A W P
Sbjct: 215 AKLAEQKLRQVAAARAQQASSAAAATAQPTAGQGGTNTDLSAKYAAAIQQKVLAQWVRPP 274
Query: 195 DFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPS 254
+ + ++ + G V+ + + AV+ +Q
Sbjct: 275 SVPPGQ--KCTINIRQLPGGQVMEAKVA----PGCPYDEAGQRSIEAAVLSAQPLPYRGF 328
Query: 255 TYKSWRNITLFFVPSK 270
RN+T F
Sbjct: 329 ESVFQRNLTFVFTAQD 344
>gi|226945714|ref|YP_002800787.1| TolA protein [Azotobacter vinelandii DJ]
gi|226720641|gb|ACO79812.1| TolA protein [Azotobacter vinelandii DJ]
Length = 452
Score = 51.8 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 13/162 (8%), Positives = 53/162 (32%), Gaps = 1/162 (0%)
Query: 8 AISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGS 67
+++ LH++ +L+ +F+ R ++ + + + ++ + K +
Sbjct: 17 VLAVGLHLLVFAMLFVSFS-MAPEMPPARPIIQATLYQMKSQSQATTQTNQKIAGEAKKT 75
Query: 68 SQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQK 127
+ + Q+ ++ K + + ++A +E++ + +
Sbjct: 76 AARQYEVEQMEQKKNEQQVAMAKAAEQRKAEEARRAEADKRAAEEASRQKASEEAKKAAE 135
Query: 128 ISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSS 169
+ ++ + A K + +E+ +
Sbjct: 136 ETARQKAAEEAKKAVEAAAKQKTAEDAKKAAEEVAKQKAAED 177
Score = 41.8 bits (96), Expect = 0.090, Method: Composition-based stats.
Identities = 18/131 (13%), Positives = 36/131 (27%), Gaps = 12/131 (9%)
Query: 146 KKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVK 205
K + + SR + ++ + V W P + + V+
Sbjct: 327 DKKAQALAELLSDNTERQQALAESRGNQVAGSFDDLIVSLVSQQWRRPPSAR--NGMSVE 384
Query: 206 MHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFR----LSPSTYKS-WR 260
+ Q+ G + G +A AV L +T+ +R
Sbjct: 385 VLIQMLPDGTITSARVTRSSGDA-----PFDNSAVAAVRNVGRIPELQQLDRATFDRNYR 439
Query: 261 NITLFFVPSKM 271
+ F P +
Sbjct: 440 QRRMIFKPEDL 450
>gi|163736800|ref|ZP_02144218.1| Putative TonB protein [Phaeobacter gallaeciensis BS107]
gi|161389404|gb|EDQ13755.1| Putative TonB protein [Phaeobacter gallaeciensis BS107]
Length = 287
Score = 51.4 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 30/207 (14%), Positives = 59/207 (28%), Gaps = 8/207 (3%)
Query: 50 HSSKYKKIEEPVVQFKGSSQENLVRDFS-VQENGDRFSDQTKTHATENETKRSSSSKGEQ 108
+ + V QF+ + + R + Q D T + +
Sbjct: 72 TPPQTAQTAPVVPQFELAQAPSAARQIALAQPTPDDRLQLDTTPPPPPPPVAKPQPEPDP 131
Query: 109 ALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKS 168
L+ A R P + A Q G S + ++
Sbjct: 132 TLRPRAKPRAKPRPKQEPPPQDAPKAAQTSAGRSEQRAAGSGGGAQAGQAGRAAAATAQA 191
Query: 169 SRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGT 228
++ A +R RV PS + +V + + + G ++ G
Sbjct: 192 GQQAKLKSIWGAKIRARVERRKRYPSGARGSG--KVIVRITVARNGQLISHRIAKSSGNA 249
Query: 229 ELVRRMLRENARKAVIKSQAFRLSPST 255
L + A KA+ +++ F +P
Sbjct: 250 -----ALDQAALKAMARARKFPAAPKQ 271
>gi|307129663|ref|YP_003881679.1| Ferric siderophore transport system, periplasmic binding protein
TonB [Dickeya dadantii 3937]
gi|306527192|gb|ADM97122.1| Ferric siderophore transport system, periplasmic binding protein
TonB [Dickeya dadantii 3937]
Length = 292
Score = 51.4 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/267 (8%), Positives = 65/267 (24%), Gaps = 30/267 (11%)
Query: 1 MRLENGLAISMILHVMFLLLLYFNFNVQLLVPIS-------------------RREMLSV 41
M+ + L +S+ +H+ + L + + + +LS
Sbjct: 1 MKSTHSLLLSVGVHLSLVWALLWGYASHDQPVLQAGRAGESMTGMHVTSFSAHAVRLLSA 60
Query: 42 DN--------IYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHA 93
+ P + + + S + +
Sbjct: 61 TIATSPADEPVTTSRATPVAVAPTVMPALPVNDRAVVTVASSHSTATTRPQKPTEKTRET 120
Query: 94 TENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVV 153
E+A + D + + A + +
Sbjct: 121 PRPPKDPVPVRAKEKADVRTIPAEPRSETRDAPAPVAGATNPAEPGNHTTASANASASAG 180
Query: 154 VRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQK 213
+ + + A+ ++ RV N+ + + + L V++ F +
Sbjct: 181 GQAAPAGESTLGQARQGAGTSQTGALKALQRRV--NYPVRARSMGVEGL-VRLRFDVTAS 237
Query: 214 GFVLGKINVDVVGGTELVRRMLRENAR 240
G V + ++++ AR
Sbjct: 238 GTVTNIRVLSENPDGMFSSDVIKDMAR 264
>gi|222086778|ref|YP_002545312.1| membrane protein [Agrobacterium radiobacter K84]
gi|221724226|gb|ACM27382.1| membrane protein [Agrobacterium radiobacter K84]
Length = 413
Score = 51.4 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/220 (11%), Positives = 60/220 (27%), Gaps = 15/220 (6%)
Query: 31 VPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTK 90
P+ E + V S + EP + + E+ V + E + +
Sbjct: 184 QPVEAPEAV-VPTPETVQQLSPETVVTSEPEILATQAPAESTVVQPANAEPVEVQPTEIT 242
Query: 91 THATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSID 150
A + K + + P + + + + + + S +
Sbjct: 243 QAAEPPAEVVTPVDKP--VQQRPKPVDKPKEIKKQPQKVVKLKSGSNGDALENSTRGSSE 300
Query: 151 TVVVRPDKKELLSKVEKSSRKRIPSQDAIAI----VRNRVIANWNIPSDFKRFKKLRVKM 206
S ++ + ++ + + L V M
Sbjct: 301 GTENAQSDNNSQSNARRTGSGSAAMESYKGKVRSCIQRAIRRI------SPSERNLTVTM 354
Query: 207 HFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKS 246
F+++ G VL G +++ + +L A + V
Sbjct: 355 RFRVDASGQVLSPAIAGGSGNSQVDQAVLA--ALRGVGSC 392
>gi|264680233|ref|YP_003280143.1| TonB family protein [Comamonas testosteroni CNB-2]
gi|262210749|gb|ACY34847.1| TonB family protein [Comamonas testosteroni CNB-2]
Length = 286
Score = 51.4 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 36/232 (15%), Positives = 73/232 (31%), Gaps = 15/232 (6%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
L+ L +S+ +H + L + + + V L V + + +
Sbjct: 13 LQLALGVSIAVHAVLLTVRFVDPERFERVFQDTP--LEVILVNARANETPDKAQAIAQTS 70
Query: 63 QFKGSSQEN-----LVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLR 117
G + + ++ GD F ++ + E + ++ Q + +
Sbjct: 71 LAGGGDADQGRATSPMPYSALTTVGDDFEEKQRQLDAMQEQQNQLLTQLRQQVAALPPID 130
Query: 118 MPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQD 177
+S +K + K L + +K I+ RP K+ + + K
Sbjct: 131 PRLSADNKA-LEAQEEKRLQLIKLLAEIEKRINAENARPKKRYIS-----PATKEAVYAV 184
Query: 178 AIAIVRNRVIANWNIPSDFKRFKKL--RVKMHFQLNQKGFVLGKINVDVVGG 227
+R +V + KKL + M +N G VL V G
Sbjct: 185 YYDALRRKVEDKGTENFPENKGKKLYGELVMILTVNHDGRVLSTEIVQGSGN 236
>gi|328953808|ref|YP_004371142.1| hypothetical protein Desac_2132 [Desulfobacca acetoxidans DSM
11109]
gi|328454132|gb|AEB09961.1| hypothetical protein Desac_2132 [Desulfobacca acetoxidans DSM
11109]
Length = 423
Score = 51.4 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/234 (10%), Positives = 60/234 (25%), Gaps = 7/234 (2%)
Query: 37 EMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATEN 96
E++ + K + + + E + S + +
Sbjct: 191 EIVPPTPPVARSKPTPKGRGEAKATTESVKPVAEPAKKSGSPNSASGAADAKARDREIAQ 250
Query: 97 ETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRP 156
E R S + ++ + S+ ++ ++ + + V
Sbjct: 251 EISRVQSKANRSSRDQTIQDSIRGLEKGLAAKSREQEYQEAVRQAAAKVSAGKVSAKVSG 310
Query: 157 DKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKR-FKKLRVKMHFQLNQKGF 215
+ + + V V +W + L+ + ++ G
Sbjct: 311 AGSGKGGSAGGGALGSAQAAAYGSKVSQMVKRHWQPNCLQRSTMHHLKAVIVIRIQSDGT 370
Query: 216 VLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPSTYKSWRNITLFFVPS 269
+ G R+ ++A AV +S P + I + F P
Sbjct: 371 ITASWFEKESGD-----RLFDQSAMSAVTRSNPLPALPPGREQL-EIGITFTPE 418
Score = 43.4 bits (100), Expect = 0.034, Method: Composition-based stats.
Identities = 21/179 (11%), Positives = 47/179 (26%), Gaps = 6/179 (3%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPV 61
RL L +SM H++ +L++ FN + R +VD + V
Sbjct: 14 RLGRMLLLSMAFHLVLFGVLWY-FNAKSPKVKPLRPTYTVDLVNM-----PLPAPAPTIV 67
Query: 62 VQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVS 121
+ E + + V+E + + + +
Sbjct: 68 KPESSPAGETVRPNREVREKPGPAIGLAPEPKKTQPDRMPPKVEKKPLTPLKPARPVEAE 127
Query: 122 PYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIA 180
P + A + + K V ++ + + + +A
Sbjct: 128 PAARAAAKPAQPAVKPIAPAKPVAKVETPPKTVAKPLAPPKPPIKTAEPVKEVPKPTLA 186
>gi|118475021|ref|YP_892024.1| TonB, putative [Campylobacter fetus subsp. fetus 82-40]
gi|118414247|gb|ABK82667.1| TonB, putative [Campylobacter fetus subsp. fetus 82-40]
Length = 249
Score = 51.4 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/245 (11%), Positives = 62/245 (25%), Gaps = 19/245 (7%)
Query: 1 MRLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP 60
M G IS++LH + S D I NE + +
Sbjct: 1 MNSFIGFFISLLLHAGLIFGFIL-----------LNAKDSADQIQNEQLLKLTFSNLNSL 49
Query: 61 VVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPV 120
K + V + ++E + K + + + + + + P
Sbjct: 50 EDIPKPYEE---VSEPIIEEKKEVDQAPQKKIIEKKIEQIYTKKIIKHTKPDKKQEQTPK 106
Query: 121 SPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIA 180
+ +K ++ ++ + + + + + I
Sbjct: 107 KQIVQNIETKQMPGIDPNLKSITQNSIEQKIFDQNTNQNKIEQQPKNTVNENMIIGTKIR 166
Query: 181 IVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENAR 240
+ S ++ + VK+ F G V +L E
Sbjct: 167 NIIANYARKNYPNSARRKRQTGIVKVSFMYKASGEVTNVKIDHSS-----TYMVLDEAVL 221
Query: 241 KAVIK 245
A+ K
Sbjct: 222 TAIQK 226
>gi|253701322|ref|YP_003022511.1| TonB family protein [Geobacter sp. M21]
gi|251776172|gb|ACT18753.1| TonB family protein [Geobacter sp. M21]
Length = 281
Score = 51.4 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/255 (9%), Positives = 64/255 (25%), Gaps = 9/255 (3%)
Query: 14 HVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLV 73
HV L++ Q + D + K +P ++ + + +
Sbjct: 21 HVGAFLIITTLPQEQPKTAPEPTFVDLTDLPQLQPQPKVPKKAAPKPEIKRYAETPQRVA 80
Query: 74 RDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATN 133
++ + + G E+ K
Sbjct: 81 KEMAPKARGAFERLTPSLPRLPKLRPAPPGPAVPAPQPEAKAKAPVTRGEGILKPRAQQL 140
Query: 134 KEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPS-QDAIAIVRNRVIANWNI 192
++ S ++ + E+ + + + V W+
Sbjct: 141 PDRSRLFPSANRLARLEESYREKYRSEVEEGDTRFLNTEDIQFGSFLRRLETAVYGVWHY 200
Query: 193 PSDFKRFK-KLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRL 251
P + + N+KG ++ ++ G ++L + + +
Sbjct: 201 PQAALLRGIEGTTPVKITFNRKGEIVNIDLLESSGS-----KILDDEVFRTLNALGPIGS 255
Query: 252 SPSTY--KSWRNITL 264
P Y ++++ I
Sbjct: 256 FPKGYRGETFKLIAF 270
>gi|166712984|ref|ZP_02244191.1| TolA [Xanthomonas oryzae pv. oryzicola BLS256]
Length = 346
Score = 51.4 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/242 (10%), Positives = 63/242 (26%), Gaps = 11/242 (4%)
Query: 33 ISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDF----SVQENGDRFSDQ 88
+ ++ + + + D + QE R + ++ + +
Sbjct: 111 PTPQQAQAQERVAQPDKVDQDRVDALAISAEKAKQEQEAKRRQEQIDLTERKRQEEAEQK 170
Query: 89 TKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKS 148
+ + E Q E A + ++ +Q+ + Q +
Sbjct: 171 LRLAKQQEEADAKKKQAAAQQAAEDAERQKKIADIRRQRAQADKDMALAEQKLRQVAAAR 230
Query: 149 IDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHF 208
+ + S A ++ +V+A W P + + ++
Sbjct: 231 AQQSSAATATSAQPTAGQG-GTSTDLSAKYAAAIQQKVLAQWVRPPSVPPGQ--KCTINI 287
Query: 209 QLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPSTYKSWRNITLFFVP 268
+ G V+ + + AV+ +Q RN+T F
Sbjct: 288 RQLPGGSVMEAKVA----PGCPYDEAGQRSIEAAVLSAQPLPYRGFESVFQRNLTFVFTA 343
Query: 269 SK 270
Sbjct: 344 QD 345
>gi|163743690|ref|ZP_02151065.1| Putative TonB protein [Phaeobacter gallaeciensis 2.10]
gi|161383057|gb|EDQ07451.1| Putative TonB protein [Phaeobacter gallaeciensis 2.10]
Length = 287
Score = 51.4 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/231 (10%), Positives = 56/231 (24%), Gaps = 13/231 (5%)
Query: 25 FNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDR 84
P ++ ++ ++ + + S + +
Sbjct: 54 VETWERPPQTQPQID----TTLTPPQTAPTAPVVPQFELAQAPSAARQIALAKPTPDDRL 109
Query: 85 FSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFA 144
D T K + + + + Q G S
Sbjct: 110 QLDTTPPPPPPPVAKPQPEPDPALRPRAKPRAKPRSKQEPPPQDAP--KAAQTSAGRSEQ 167
Query: 145 EKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRV 204
+ ++ ++ A +R RV N S + RV
Sbjct: 168 RAAGSGGGAQAGQAGRAAAATAQAGQQAKLKSIWGAKIRARVERNKRRTSGTRATG--RV 225
Query: 205 KMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPST 255
+ + + G ++ G L + A KAV +++ F +P
Sbjct: 226 LLRLTVARNGQLISHRIAKSSGNA-----ALDQAALKAVARARKFPAAPKQ 271
>gi|21232449|ref|NP_638366.1| TolA protein [Xanthomonas campestris pv. campestris str. ATCC
33913]
gi|21114231|gb|AAM42290.1| TolA protein [Xanthomonas campestris pv. campestris str. ATCC
33913]
Length = 345
Score = 51.4 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/256 (10%), Positives = 73/256 (28%), Gaps = 15/256 (5%)
Query: 24 NFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQ---E 80
+ +P R + ++ K+++ V S+E ++ + E
Sbjct: 95 SVPPPQPIPELRPQDAPTQQQAQAQERVAQPDKVDQDKVDALAISEEKAKQEQEAKRRQE 154
Query: 81 NGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQ------KISKATNK 134
D + + A + + + K++A + + +K+ + +A +
Sbjct: 155 QIDLTERKRQEEAEQKLRLAKQQEEEDAKKKQAAAQQAAQAEREKKIADIRRQREQADKE 214
Query: 135 EQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPS 194
+ + + + S A ++ +V+A W P
Sbjct: 215 AKLAEQKLRQVAAARAQQASSAAAATAQPTAGQGGTNTDLSAKYAAAIQQKVLAQWVRPP 274
Query: 195 DFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPS 254
+ + ++ + G V+ + + AV+ +Q
Sbjct: 275 SVPPGQ--KCTINIRQLPGGQVMEAKVA----PGCPYDEAGQRSIEAAVLSAQPLPYRGF 328
Query: 255 TYKSWRNITLFFVPSK 270
RN+T F
Sbjct: 329 ESVFQRNLTFVFTAQD 344
>gi|328952087|ref|YP_004369421.1| TonB family protein [Desulfobacca acetoxidans DSM 11109]
gi|328452411|gb|AEB08240.1| TonB family protein [Desulfobacca acetoxidans DSM 11109]
Length = 279
Score = 51.4 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/249 (10%), Positives = 52/249 (20%), Gaps = 12/249 (4%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
+ S+++H + + + +F + ++ +
Sbjct: 21 AILGSLLVHGLLVAGMLTSFMSHPAKKCVVVPVEAIALVPGPKGGGGGRPAAAT------ 74
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
+ +T + S
Sbjct: 75 RPEAVPPKPSPVCPPARPQVKPKTVLKTRLAPPPPEPTMAPVIPTPASPPAITRGKSSPA 134
Query: 126 QKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNR 185
+ G S + + T S Q + +R
Sbjct: 135 TVAACQAGSSGAAVGSSVSGQGGRGTGAGGGVGPGRGRGSGPGSGPGSALQGYLREIRRL 194
Query: 186 VIANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVI 244
+ P +R + V + F + G V G +L E AR V
Sbjct: 195 LEKQKEYPLMARRRNIQGMVVVMFTIASGGQVDASQVSRSSGHD-----LLDEAARNTVR 249
Query: 245 KSQAFRLSP 253
+ F P
Sbjct: 250 RVGRFPPIP 258
>gi|182677232|ref|YP_001831378.1| TonB family protein [Beijerinckia indica subsp. indica ATCC 9039]
gi|182633115|gb|ACB93889.1| TonB family protein [Beijerinckia indica subsp. indica ATCC 9039]
Length = 269
Score = 51.4 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/246 (10%), Positives = 60/246 (24%), Gaps = 26/246 (10%)
Query: 11 MILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIE-EPVVQFKGSSQ 69
++ H + L +R + E P V
Sbjct: 30 LLAHAGLVFWL------------TRPHEDDLAAGQLEPAVMIDLGPEAMAPPVDTPAEVA 77
Query: 70 ENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKIS 129
+ + +EN ++ + + + +
Sbjct: 78 PQQMTEADPEENKEKPDPDPVPDQPVPPPELPPLPETPVVP-------KAEVVMPAKPVV 130
Query: 130 KATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIAN 189
K ++ A K + S + + D + V +++ N
Sbjct: 131 KKPPPKKKDVKKEHAPKTTAPVQTNARASNAAASAATGAGGSSAAANDWKSRVFSQLARN 190
Query: 190 WNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQA 248
P ++ + V + F +++ G VL G + L A + V ++
Sbjct: 191 KRYPDSERQNGVQGVVGLAFTIDRSGNVLSAHVSRSSGSS-----ALDNAAVEMVHRASP 245
Query: 249 FRLSPS 254
P
Sbjct: 246 LPAPPD 251
>gi|154493586|ref|ZP_02032906.1| hypothetical protein PARMER_02926 [Parabacteroides merdae ATCC
43184]
gi|154086796|gb|EDN85841.1| hypothetical protein PARMER_02926 [Parabacteroides merdae ATCC
43184]
Length = 284
Score = 51.4 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 33/262 (12%), Positives = 81/262 (30%), Gaps = 20/262 (7%)
Query: 1 MRLEN----GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKY-- 54
M+L G+A S+ H+ LL+L F ++ +++ N+
Sbjct: 1 MKLNKDDIYGIAGSVAFHLFILLILGFTVLKTVVPDEDGGILVNFGNVNAAAGTFEPKYT 60
Query: 55 ------------KKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSS 102
+ EP V+ + SV + + + + E K+
Sbjct: 61 GQEPPQETTPPPPPVPEPKVETPKEDLVTQEIEESVAIEEAKKKKEKEEQRKKEEEKKRK 120
Query: 103 SSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELL 162
++ +++ + ++ ++K +NK GI E S +
Sbjct: 121 EEAEKERIRKEEAEKKRLAEERRKKEQAISNKVAGAFGIGSQEGNSQGDAGSGTGNQGSP 180
Query: 163 SKVEKSSRKRIPSQ-DAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKIN 221
+ + + A + ++ R+ ++ ++ KG V+
Sbjct: 181 FGNSDHGANEGVGGYGSFNLNGRSIGAGGLPRPAYTIQEEGRIVINITVDPKGNVIFAEI 240
Query: 222 VDVVG-GTELVRRMLRENARKA 242
+R+ + A++A
Sbjct: 241 GKGTNIDNGSMRKSALDAAKRA 262
>gi|253702171|ref|YP_003023360.1| TonB family protein [Geobacter sp. M21]
gi|251777021|gb|ACT19602.1| TonB family protein [Geobacter sp. M21]
Length = 253
Score = 51.4 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/263 (10%), Positives = 64/263 (24%), Gaps = 30/263 (11%)
Query: 7 LAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKG 66
A+S H++ L++ + + VD + +
Sbjct: 16 FALSFACHLVVFLIIA-KWQFYPEFHPDDTPVTYVDMVTLPVASPQAGTPAPPAEEEGAP 74
Query: 67 SSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQ 126
VQ A ++ + L ++ +K+
Sbjct: 75 PPPAAPAAPAMVQPAKPAKPAAKVPAAEPKAKTAPANPAAQAREFNERLAKLERVAQEKR 134
Query: 127 KISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRV 186
+ V+ R KK +R D + +++R+
Sbjct: 135 Q----------------------AEVMERLRKKGSQQTGMPGARGTEAGSDYPSYLQSRL 172
Query: 187 IANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKS 246
+ K +V ++ G + G + + +AV +
Sbjct: 173 KDALK-EVMVSQTKSPQVIATITVSGDGRIAQYHVEKGSGD-----PLFDDAVHRAVTLA 226
Query: 247 QAFRLSPSTYKSWRNITLFFVPS 269
+ P ++ + F P
Sbjct: 227 GKSLVPPPGGAPFKRM-FRFRPE 248
>gi|94501945|ref|ZP_01308454.1| TonB like protein [Oceanobacter sp. RED65]
gi|94425939|gb|EAT10938.1| TonB like protein [Oceanobacter sp. RED65]
Length = 248
Score = 51.4 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/175 (13%), Positives = 60/175 (34%), Gaps = 6/175 (3%)
Query: 88 QTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKK 147
T+ + + +K + ++ +++ S K+ E+
Sbjct: 66 ANDQMITQRLRAKETKTKTPKPDTKTPPVKLDDSVQSSSTNKIVIPKKNQEDRKPLNEEV 125
Query: 148 SIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFK-KLRVKM 206
+ + +P L+ ++ + + + N + + P KR K + V +
Sbjct: 126 TKHSNAKQPLISTGLASDTENGGQVGALDHYMKELLNWLHQHKRYPKKAKRKKIEGVVHL 185
Query: 207 HFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPSTYKSWRN 261
F +N+KG VL G + +L A + ++++ P + + +
Sbjct: 186 AFTMNRKGEVLEHRVEQSSGSS-----ILDNAALRVLVQASPLPPVPQDFNTGKT 235
>gi|315126275|ref|YP_004068278.1| TolA protein [Pseudoalteromonas sp. SM9913]
gi|315014789|gb|ADT68127.1| TolA protein [Pseudoalteromonas sp. SM9913]
Length = 301
Score = 51.4 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 39/310 (12%), Positives = 92/310 (29%), Gaps = 53/310 (17%)
Query: 3 LENGLAISMILHVMFLLLLY--------------FNFNVQLLVPISRREMLSVDNIYNED 48
+ L S+ILH+ LY N + P + ++VD E
Sbjct: 1 MNTSLIKSVILHLALGGFLYASANIHPPKPKVMEVTLNAAIPEPENAVSAVTVDQQQVEQ 60
Query: 49 YHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQ 108
+ KK E+ ++ R ++ + + + K + + K ++ E
Sbjct: 61 KIAELRKKEEDKRRAEDKRIRDLERRAADARKQSESEARRIKKLEQQRKAKEKERAEAEA 120
Query: 109 ALKESALLRMPV---------------------------SPYDKQKISKATNKEQDLQGI 141
K++ + +K + K +
Sbjct: 121 QAKKAREIEQRERAKAKQAQKQKQEAEDAAKAAADKRKAEEAALKKAEEERKKRAEEAER 180
Query: 142 SFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKK 201
+ + + K++ + + A++ R+ N I K
Sbjct: 181 KRQQALQEQILQEQLAKEQAARNKIRQQQVVSEVDKYRALIMARIQQNLLIDEKM---KN 237
Query: 202 LRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPST--YKSW 259
+ +++ +L G V ++ +++ E A +AV + +S ++
Sbjct: 238 QQCRINLRLGFNGLVTQVKSL-------GGDKLVCEAALRAVRMADTLPVSKDKDVFEQL 290
Query: 260 RNITLFFVPS 269
+NI + P
Sbjct: 291 KNINITIAPE 300
>gi|306829806|ref|ZP_07462993.1| endo-beta-N-acetylglucosaminidase [Streptococcus mitis ATCC 6249]
gi|304427817|gb|EFM30910.1| endo-beta-N-acetylglucosaminidase [Streptococcus mitis ATCC 6249]
Length = 825
Score = 51.4 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 11/136 (8%), Positives = 34/136 (25%), Gaps = 2/136 (1%)
Query: 61 VVQFKGSSQENLVRD-FSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMP 119
K + + + + K + + + ++
Sbjct: 356 TPAQKPAEKPKTPAPKPAEKPKTPAQKPAEKPKTPAPKPAEKPKTPAQNPAEKPKTPAPK 415
Query: 120 VSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAI 179
+ K K T K ++ + + + V + K K+ + +
Sbjct: 416 PAEKPKTPAQKPTEKAKETTPKQDKSQSKVQSGWVGNYYLKSDGKRAKNEWVDG-GRYYV 474
Query: 180 AIVRNRVIANWNIPSD 195
+V ++W +
Sbjct: 475 DSDGKKVKSDWIYDKN 490
>gi|163796011|ref|ZP_02189974.1| TonB-like protein [alpha proteobacterium BAL199]
gi|159178766|gb|EDP63304.1| TonB-like protein [alpha proteobacterium BAL199]
Length = 323
Score = 51.4 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/232 (10%), Positives = 64/232 (27%), Gaps = 7/232 (3%)
Query: 29 LLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQ 88
V + L S + E + + +V+ + + +
Sbjct: 83 EPVTPPVPQALEPPKPETVAETVSAAEPPELIKPEAIEPVKPTVVKAPAPEVQPVPMPEA 142
Query: 89 TKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKS 148
A + + + A P S ++ + S + +
Sbjct: 143 EMVEARDAVVPPTPQPRPTPPKSTIAKPAPPRSVTEQPSQVAEAPPAAAVSAASDTQSRD 202
Query: 149 IDTVVVRPDKKELLSKV-EKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFK-KLRVKM 206
V S + + D ++ +R + + P ++ + + +
Sbjct: 203 SGAVAGGQPAHGADSGTPSPAVATAGGAADYMSQLRAWLERHKEYPHRARQRRIEGTALL 262
Query: 207 HFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPSTYKS 258
F +++ G VL G R L + + ++Q P++++
Sbjct: 263 VFVMDRSGRVLSHHIERSAGD-----RSLDHAVERMIERAQPLPGVPASFQQ 309
>gi|212634656|ref|YP_002311181.1| TolA [Shewanella piezotolerans WP3]
gi|212556140|gb|ACJ28594.1| TolA [Shewanella piezotolerans WP3]
Length = 311
Score = 51.4 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/219 (10%), Positives = 69/219 (31%), Gaps = 12/219 (5%)
Query: 53 KYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKE 112
K ++ + ++ + Q+ + + + + E +R +S + + +
Sbjct: 101 KLEQERKQKEIETRNANDAAKAAQLKQKQEKEKAAKAEADRKQKEKERKASEEAAKKAAD 160
Query: 113 SALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKR 172
+ + + + E+ + A ++ + ++ ++
Sbjct: 161 KRKAEEAAALKAENERKRKAEAERKRKAEEQARREQEKMMQEALAAEQAALSQTRNKAVM 220
Query: 173 IPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVR 232
Q +++R + N + + ++ +L GFV +D
Sbjct: 221 SEVQRYTSMIRATIQRNLVVDESMRGK---SCRVFIRLANDGFVTASKILDGDS------ 271
Query: 233 RMLRENARKAVIKSQAFRLS--PSTYKSWRNITLFFVPS 269
++ + A+ K+ +S P Y + I L P
Sbjct: 272 -VVCRATKAAINKAGRLPVSNEPDVYNKLKEINLTVQPE 309
>gi|157370291|ref|YP_001478280.1| colicin uptake-like protein [Serratia proteamaculans 568]
gi|157322055|gb|ABV41152.1| Membrane protein involved in colicin uptake-like protein [Serratia
proteamaculans 568]
Length = 146
Score = 51.4 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 17/107 (15%), Positives = 34/107 (31%), Gaps = 13/107 (12%)
Query: 164 KVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVD 223
+ + VR + +++ D + + + + G +L
Sbjct: 51 DGKATPAAGDEVSHYAGQVRAAIQSHF---YDANAYAGKQCTIRMKFAPDGMLLAVR--- 104
Query: 224 VVGGTELVRRMLRENARKAVIKSQAFRLSPST--YKSWRNITLFFVP 268
+E L A KA+ F PS Y ++++ L F P
Sbjct: 105 ----SESGDPALCRAAIKAITN-TRFPKPPSQAVYGAFKDSVLEFRP 146
>gi|289626501|ref|ZP_06459455.1| TonB, C-terminal [Pseudomonas syringae pv. aesculi str. NCPPB3681]
gi|289650947|ref|ZP_06482290.1| TonB, C-terminal [Pseudomonas syringae pv. aesculi str. 2250]
gi|330868617|gb|EGH03326.1| TonB [Pseudomonas syringae pv. aesculi str. 0893_23]
Length = 356
Score = 51.4 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 33/343 (9%), Positives = 87/343 (25%), Gaps = 89/343 (25%)
Query: 10 SMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKG--- 66
++ LH++ +L+ +F + +P ++ ++ + + + ++ + K
Sbjct: 20 AVALHILIFGMLFVSFAMTPDLPEAKP-IVQATLYQLKSKSQATTQTNQKIAGEAKKTAA 78
Query: 67 ---------------------SSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSK 105
+ E + + + + +D+ K + E + +
Sbjct: 79 RQTEVEQLEQKKIEQLKQEAVKAAEQKKEEAAQKAEEQKAADEAKKAEQKAEEAKKADDA 138
Query: 106 GEQALKESALLRMPVSPYDKQKISKATNKEQ----------------------------- 136
+ + + + I+K +E+
Sbjct: 139 KKADEAKKVADAKKLEEKQQADIAKKKAEEEAKKKAEEDAKKAAAEEAKKQAADEAKKKA 198
Query: 137 ------------------------DLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKR 172
AE K + K + R
Sbjct: 199 AEDAKKKAAEDAKKKAAADSAKKAQEAARKSAEDKKAQALADLLSDKPERQQALADERGD 258
Query: 173 IPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVR 232
+ ++R R W+ P + + V + + G + G
Sbjct: 259 ETAGSFDDLIRVRASEGWSRPPSAR--NNMSVTLQIGMLPDGTIASVSIAKSSGDA---- 312
Query: 233 RMLRENARKAVIKSQAFR----LSPSTYKSWRNITLFFVPSKM 271
+A AV L P+ + +R+ + F P +
Sbjct: 313 -PFDSSAVAAVKNIGRLTEMQGLKPADFAPYRSFKMTFTPGDL 354
>gi|289666998|ref|ZP_06488073.1| hypothetical protein XcampmN_00305 [Xanthomonas campestris pv.
musacearum NCPPB4381]
Length = 346
Score = 51.4 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/241 (9%), Positives = 62/241 (25%), Gaps = 9/241 (3%)
Query: 33 ISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSV---QENGDRFSDQT 89
+ ++ + + + D + QE R + + ++Q
Sbjct: 111 PTPQQAQAQERVAQPDKVDQDRVDALAISAEKAKQEQEAKRRQEQIDLTERKRQEEAEQK 170
Query: 90 KTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSI 149
A + E + + R +++ +AT + + +
Sbjct: 171 LRLAKQQEEADAKKKQAAPQQAADDAERQKKIADIRRQREQATKEAALAEQKLRQVAAAR 230
Query: 150 DTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQ 209
+ + A ++ +V+A W P + + ++ +
Sbjct: 231 AQQASAAAATSAQPTAGQGGTSTDLAAKYAAAIQQKVLAQWVRPPSVPPGQ--KCTINIR 288
Query: 210 LNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPSTYKSWRNITLFFVPS 269
G V+ + + AV+ +Q RN+T F
Sbjct: 289 QLPGGSVMEAKVA----PGCPYDEAGQRSIEAAVLSAQPLPYRGFESVFQRNLTFVFTAQ 344
Query: 270 K 270
Sbjct: 345 D 345
>gi|262374157|ref|ZP_06067434.1| TonB family protein [Acinetobacter junii SH205]
gi|262311168|gb|EEY92255.1| TonB family protein [Acinetobacter junii SH205]
Length = 295
Score = 51.4 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/228 (10%), Positives = 70/228 (30%), Gaps = 10/228 (4%)
Query: 27 VQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFS 86
+ + ++V + D + + + + + +
Sbjct: 41 AMPTPSDTSTKEIAVSIRPSTDKVENADFLAQADQKGSGEFREAHRMSSDMPSPMQADAT 100
Query: 87 DQTKTHATENETKRSSSSKGEQALKESAL--LRMPVSPYDKQKISKATNKEQDLQGISFA 144
+ + ++ K E+ + + L + K+ + ++ Q + +
Sbjct: 101 TGETEFESLEKIQQKRELKFEEKVLMTVLSWQKQAEQSERKKALEDLQSQFQAKAAMVAS 160
Query: 145 EKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKK--- 201
+ +K+ + V+ K+ S + R +V N ++
Sbjct: 161 LEAQYLQRQQNFSRKQRIKTVDSIQAKQDASAAYLDKFRQKVELYGNRYYPDAAKQQRLS 220
Query: 202 LRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAF 249
V++ LN +G + ++ G + +L E A+ +V + F
Sbjct: 221 GEVRLMVILNSQGGIRAIRLIESSGHS-----ILDEAAKASVRRGAPF 263
>gi|315497901|ref|YP_004086705.1| tonb family protein [Asticcacaulis excentricus CB 48]
gi|315415913|gb|ADU12554.1| TonB family protein [Asticcacaulis excentricus CB 48]
Length = 240
Score = 51.4 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/205 (11%), Positives = 51/205 (24%), Gaps = 6/205 (2%)
Query: 52 SKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALK 111
+ V + T T + S +
Sbjct: 23 LAVAGLTPQPSPPPVEIPAFEVSLERPVRSSVEADPPTAVVQTSSSADVKPSEQPVYKAV 82
Query: 112 ESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRK 171
+ +P ++ + + + + S+ +
Sbjct: 83 STPTPSSSSAPVAAIPTAQVAPASGRSEPAAVTPSARAPATAAPSAPPQAVGASRPSAVQ 142
Query: 172 RIPSQDAIAIVRNRVIANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKINVDVVGGTEL 230
P+ A +R + P KR + + V + FQ++++G VL G +
Sbjct: 143 GQPTATYAARLRQHIEQFKIYPPQAKRRRVEGEVVLSFQMDRQGRVLMSRIERGSGSAD- 201
Query: 231 VRRMLRENARKAVIKSQAFRLSPST 255
+ A + +Q P T
Sbjct: 202 ----IDRAALTMLADAQPLPRPPDT 222
>gi|269468524|gb|EEZ80178.1| hypothetical protein Sup05_0460 [uncultured SUP05 cluster
bacterium]
Length = 316
Score = 51.1 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 30/292 (10%), Positives = 75/292 (25%), Gaps = 38/292 (13%)
Query: 11 MILHVMFLLLLYFNFNVQLLVP--------ISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
+ LH + L+ L F + +P + ++VD + ++
Sbjct: 26 VALHFVLLIALMFANPQRWEIPQKVAKSSSKVVPKAVTVDLTEIKKEKQRLVDLKKKREK 85
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
K + + + R E + K+ + K ++A K+
Sbjct: 86 HLKDLQRAEKKVENERYKEQQRLKKLKAKVKKEKKAKKIAEQKRQEAEKKIKQALKKKKS 145
Query: 123 YDKQKI---------------------------SKATNKEQDLQGISFAEKKSIDTVVVR 155
+K+ + + ++
Sbjct: 146 AEKKAKDAEKKKKLAEKKAKDAEKKAEVAEKKKQEIEKLRKVESKKFKKDQSKRALTKEI 205
Query: 156 PDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGF 215
+++ ++ + + I + +RV W + +H + G
Sbjct: 206 QAEEDQERELVQEEILNELKVNYINQIASRVKEKWRYNGAKDDWG---CDVHILQDANGK 262
Query: 216 VLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPSTYKSWRNITLFFV 267
V+ + + ++AV K+ +P R I F
Sbjct: 263 VMSVNLQSCNIDNSTKAQSFKNAIKRAVYKASPLPHAPDQSVFDREILFHFR 314
>gi|289661907|ref|ZP_06483488.1| hypothetical protein XcampvN_02104 [Xanthomonas campestris pv.
vasculorum NCPPB702]
Length = 346
Score = 51.1 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/241 (9%), Positives = 62/241 (25%), Gaps = 9/241 (3%)
Query: 33 ISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSV---QENGDRFSDQT 89
+ ++ + + + D + QE R + + ++Q
Sbjct: 111 PTPQQAQAQERVAQPDKVDQDRVDALAISAEKAKQEQEAKRRQEQIDLTERKRQEEAEQK 170
Query: 90 KTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSI 149
A + E + + R +++ +AT + + +
Sbjct: 171 LRLAKQQEEADAKKKQAAAQQAADDAERQKKIADIRRQREQATKEAALAEQKLRQVAAAR 230
Query: 150 DTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQ 209
+ + A ++ +V+A W P + + ++ +
Sbjct: 231 AQQASAAAATSAQPTAGQGGTSTDLAAKYAAAIQQKVLAQWVRPPSVPPGQ--KCTINIR 288
Query: 210 LNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPSTYKSWRNITLFFVPS 269
G V+ + + AV+ +Q RN+T F
Sbjct: 289 QLPGGSVMEAKVA----PGCPYDEAGQRSIEAAVLSAQPLPYRGFESVFQRNLTFVFTAQ 344
Query: 270 K 270
Sbjct: 345 D 345
>gi|224826139|ref|ZP_03699242.1| protein TolA [Lutiella nitroferrum 2002]
gi|224601776|gb|EEG07956.1| protein TolA [Lutiella nitroferrum 2002]
Length = 320
Score = 51.1 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 29/247 (11%), Positives = 64/247 (25%), Gaps = 11/247 (4%)
Query: 26 NVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRF 85
+ P + + + + + + + E +
Sbjct: 80 PAPVEPPRAEVNLGEKRKPLPPVKKPEPKPEPKPEPKPEPKPEPKPEPKREAKPEVVKQA 139
Query: 86 SDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAE 145
Q E ++ K + + P K + N E D
Sbjct: 140 KPQPAPKPVEKAPPVKTAKADSVPDKHAEKKAAALPPGKGSKAAPRYNPEADDLLADLGS 199
Query: 146 KKSIDTVVVRPDKKELLSKVEKSSRKRIPSQ--DAIAIVRNRVIANWNIPSDFKRFKKLR 203
+ R D+ + V S + V+ +V +P + +
Sbjct: 200 SNTTKKGNARSDQAGQKTGVVGGSANGTSLNLDGYASKVQAKVKPLVQVPPELSG--NPK 257
Query: 204 VKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPST--YKSWRN 261
+ L V + G T E ++A+ +++ F P+ + +R
Sbjct: 258 AVVQVTLLPSLEVRAVRLLASSGNT-----AYDEAVQRAIWEAKVFPSLPAGASFTDFRQ 312
Query: 262 ITLFFVP 268
+ L F P
Sbjct: 313 LKLEFRP 319
>gi|297465038|ref|XP_002703630.1| PREDICTED: titin [Bos taurus]
Length = 33452
Score = 51.1 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 15/127 (11%), Positives = 38/127 (29%), Gaps = 3/127 (2%)
Query: 52 SKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALK 111
+K ++ + V + ++ + K E + + K E
Sbjct: 9298 AKVPEVPKKPVPEEKKPVPVPKKEPAAPPKVPEVP---KKPVPEEKVPVPIAKKKEAPPA 9354
Query: 112 ESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRK 171
+ ++ V +K I + +KK + P K+E + + +
Sbjct: 9355 KVPEVQKRVVTEEKITIVTEREESPPPAVPEIPKKKLPEEKRPVPRKEEEVPPPKVPAVP 9414
Query: 172 RIPSQDA 178
+ P +
Sbjct: 9415 KKPVPEE 9421
Score = 39.1 bits (89), Expect = 0.72, Method: Composition-based stats.
Identities = 11/99 (11%), Positives = 29/99 (29%), Gaps = 5/99 (5%)
Query: 52 SKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHAT-----ENETKRSSSSKG 106
+K ++ + V K + + S + + + +
Sbjct: 10561 AKVPEVPKAAVPEKKVPEAIPPKPESPPPAVPEAPKEVVPEKKVPVMPPKKPEVPPAKVP 10620
Query: 107 EQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAE 145
E + ++PV+P K ++ A E + +
Sbjct: 10621 EAPKEVVPEKKVPVTPPKKPEVPPAKVPEVPKAAVPEKK 10659
>gi|297471578|ref|XP_002685306.1| PREDICTED: titin [Bos taurus]
gi|296490722|gb|DAA32835.1| titin [Bos taurus]
Length = 33452
Score = 51.1 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 15/127 (11%), Positives = 38/127 (29%), Gaps = 3/127 (2%)
Query: 52 SKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALK 111
+K ++ + V + ++ + K E + + K E
Sbjct: 9298 AKVPEVPKKPVPEEKKPVPVPKKEPAAPPKVPEVP---KKPVPEEKVPVPIAKKKEAPPA 9354
Query: 112 ESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRK 171
+ ++ V +K I + +KK + P K+E + + +
Sbjct: 9355 KVPEVQKRVVTEEKITIVTEREESPPPAVPEIPKKKLPEEKRPVPRKEEEVPPPKVPAVP 9414
Query: 172 RIPSQDA 178
+ P +
Sbjct: 9415 KKPVPEE 9421
Score = 39.1 bits (89), Expect = 0.72, Method: Composition-based stats.
Identities = 11/99 (11%), Positives = 29/99 (29%), Gaps = 5/99 (5%)
Query: 52 SKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHAT-----ENETKRSSSSKG 106
+K ++ + V K + + S + + + +
Sbjct: 10561 AKVPEVPKAAVPEKKVPEAIPPKPESPPPAVPEAPKEVVPEKKVPVMPPKKPEVPPAKVP 10620
Query: 107 EQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAE 145
E + ++PV+P K ++ A E + +
Sbjct: 10621 EAPKEVVPEKKVPVTPPKKPEVPPAKVPEVPKAAVPEKK 10659
>gi|78048829|ref|YP_365004.1| biopolymer transport TolA protein [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|325929358|ref|ZP_08190488.1| Cell division and transport-associated protein TolA (TC 2.C.1.2.1)
[Xanthomonas perforans 91-118]
gi|78037259|emb|CAJ25004.1| biopolymer transport TolA protein [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|325540270|gb|EGD11882.1| Cell division and transport-associated protein TolA (TC 2.C.1.2.1)
[Xanthomonas perforans 91-118]
Length = 346
Score = 51.1 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/242 (10%), Positives = 63/242 (26%), Gaps = 11/242 (4%)
Query: 33 ISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDF----SVQENGDRFSDQ 88
+ ++ + + I D + + QE R + ++ + +
Sbjct: 111 PTPQQAQAQERIAQPDKVDQERVDALAISAEKAKQEQEAKRRQEQIDLTERKRQEEAEQK 170
Query: 89 TKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKS 148
+ + E Q E A + ++ +Q+ Q +
Sbjct: 171 LRLAKQQEEADAKKKQAAAQQAAEEAERQKKIADIRRQRAQADKEMALAEQKLRQVAAAR 230
Query: 149 IDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHF 208
+ + S A ++ +V+A W P + + ++
Sbjct: 231 AQQASAAAATSAQPTAGQG-GTSTDLSAKYAAAIQQKVLAQWVRPPSVPPGQ--KCTINI 287
Query: 209 QLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPSTYKSWRNITLFFVP 268
+ G V+ + + AV+ +Q RN+T F
Sbjct: 288 RQLPGGSVMEAKVA----PGCPYDEAGQRSIEAAVLSAQPLPYRGFESVFQRNLTFVFTA 343
Query: 269 SK 270
Sbjct: 344 QD 345
>gi|257095750|ref|YP_003169391.1| protein TolA [Candidatus Accumulibacter phosphatis clade IIA str.
UW-1]
gi|257048274|gb|ACV37462.1| protein TolA [Candidatus Accumulibacter phosphatis clade IIA str.
UW-1]
Length = 352
Score = 51.1 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 29/240 (12%), Positives = 69/240 (28%), Gaps = 7/240 (2%)
Query: 31 VPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTK 90
+P + I + K E P + + + +E + + K
Sbjct: 119 LPKPEPRVEPKPPIKPDIPLKEDRKPKEPPKKEEPKPKELPKKEEPKAKELPKKEEPKAK 178
Query: 91 THATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSID 150
+ E K + E+ K R +++ + + D + ++
Sbjct: 179 EPPRKEEPKPKEPPRKEEPRKPEPERRPDARDEAARELKEVQKLKADQKAAEDQRARAEA 238
Query: 151 TVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQL 210
R + + E++ + + + +R ++ N ++P + + +
Sbjct: 239 EARQRKQLQAEQAATERARAQSLDDEAYKQSIRLKIRGNVSLPPGIQG--NPKSEFEVTQ 296
Query: 211 NQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPSTYKSWRNITLFFVPSK 270
G VL + G L +A+ KS R + L + P
Sbjct: 297 LPTGDVLDVRLLRSSGN-----PALDAAVERAIRKSSPLPKPAQPELFKRVLRLSYKPQD 351
>gi|255599137|ref|XP_002537160.1| conserved hypothetical protein [Ricinus communis]
gi|223517280|gb|EEF25224.1| conserved hypothetical protein [Ricinus communis]
Length = 253
Score = 51.1 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/230 (10%), Positives = 56/230 (24%), Gaps = 18/230 (7%)
Query: 39 LSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENG-------DRFSDQTKT 91
L + + Q + + + + D
Sbjct: 10 LEITLAQYRSDKAPARADFLAQQNQEGSGTLDKKALLTTRKTADFHDNAIRDIAPPPQTA 69
Query: 92 HATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDT 151
A + +A ++A P + + + A+
Sbjct: 70 AAEQTPRALDLVKTRSRADDKAAAKPAPEAQTQQTPSDMTILQRDQEIASLEAKLDIQRQ 129
Query: 152 VVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLR---VKMHF 208
+ ++ + KR + R R+ A N + +K +++
Sbjct: 130 AYAAR---PRIRRLTSVATKRSEDAVYLNSWRERIEAIGNRNYPAQARQKQIFGDLRLMV 186
Query: 209 QLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPSTYKS 258
L G V + G ++L E A + V + + PS
Sbjct: 187 ALYPNGEVKEVRVLKSSG-----HKVLDEGAIRIVHLAAPYEPFPSDMSR 231
>gi|299533106|ref|ZP_07046491.1| TonB family protein [Comamonas testosteroni S44]
gi|298718883|gb|EFI59855.1| TonB family protein [Comamonas testosteroni S44]
Length = 286
Score = 51.1 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 36/232 (15%), Positives = 73/232 (31%), Gaps = 15/232 (6%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
L+ L +S+ +H + L + + + V L V + + +
Sbjct: 13 LQLALGVSIAVHAVLLTVRFVDPERFERVFQDTP--LEVILVNARANETPDKAQAIAQTS 70
Query: 63 QFKGSSQEN-----LVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLR 117
G + + ++ GD F ++ + E + ++ Q + +
Sbjct: 71 LAGGGDADQGRATSPMPYSALTTVGDDFEEKQRQLDAMQEQQNQLLTQLRQQVAALPPID 130
Query: 118 MPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQD 177
+S +K + K L + +K I+ RP K+ + + K
Sbjct: 131 PRLSADNKA-LEAQEEKRLQLIKLLAEIEKRINAENARPKKRYIS-----PATKEAVYAV 184
Query: 178 AIAIVRNRVIANWNIPSDFKRFKKL--RVKMHFQLNQKGFVLGKINVDVVGG 227
+R +V + KKL + M +N G VL V G
Sbjct: 185 YYDALRRKVEDKGTENFPENKGKKLYGELVMILTVNHDGRVLSTEVVQGSGN 236
>gi|194367080|ref|YP_002029690.1| TonB family protein [Stenotrophomonas maltophilia R551-3]
gi|194349884|gb|ACF53007.1| TonB family protein [Stenotrophomonas maltophilia R551-3]
Length = 239
Score = 51.1 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 15/188 (7%), Positives = 48/188 (25%), Gaps = 9/188 (4%)
Query: 68 SQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQK 127
L+ + + + + ++ + K + A ++ +
Sbjct: 40 PPAALMLELAPMAQAPPVPPREVATGPLQQQQQRQAPKPALREQPKAPMQPQGELPPPRT 99
Query: 128 ISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVI 187
+ + ++ V + + + + +
Sbjct: 100 PEPTPSPDTADANVAQTSAPPQ---VAADAATRYTAPQTTAGERSRAEATWEGRLLGHLQ 156
Query: 188 ANWNIPSDFKR-FKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKS 246
+ P +R ++ V + F + + G V G G +L + V ++
Sbjct: 157 KHRRYPRQAERLRQQGVVYVRFAVARDGAVSGLKLGRSSG-----FALLDQETLDTVQRA 211
Query: 247 QAFRLSPS 254
P+
Sbjct: 212 SPVPAPPA 219
>gi|94501019|ref|ZP_01307543.1| hypothetical protein RED65_05169 [Oceanobacter sp. RED65]
gi|94426766|gb|EAT11750.1| hypothetical protein RED65_05169 [Oceanobacter sp. RED65]
Length = 244
Score = 51.1 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 30/206 (14%), Positives = 60/206 (29%), Gaps = 13/206 (6%)
Query: 68 SQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQK 127
V VQ + + K + + + + + + P +K +
Sbjct: 46 KTPKHVSATLVQLDKPKPKKVVKKPKPKPKPVQKPKVESKPKTNQEKAKPAKPKPAEKPE 105
Query: 128 ISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVI 187
+D A+++S + ++E + E+ D + + +
Sbjct: 106 AKINPQPIEDNFAEQLAQEESQRELERLMKEEEAAKQAEQEQEA---VNDYTSQIVGLIQ 162
Query: 188 ANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQ 247
+ W P K V + L G V ++ G L +A +AV K
Sbjct: 163 SVWRFPPSAK--HDQVVMLKVFLVPTGEVTEVQLLESSGN-----PALDRSAEQAVWKVG 215
Query: 248 AFRLSPS---TYKSWRNITLFFVPSK 270
+ K +R I L P
Sbjct: 216 KLPVPDDVVLFEKQFRQIILKLQPEN 241
>gi|288941962|ref|YP_003444202.1| TonB family protein [Allochromatium vinosum DSM 180]
gi|288897334|gb|ADC63170.1| TonB family protein [Allochromatium vinosum DSM 180]
Length = 274
Score = 51.1 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/258 (10%), Positives = 76/258 (29%), Gaps = 19/258 (7%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
++ + ++H+ + V+ S+ + + ++ +
Sbjct: 11 AVSAAALVHLAVVA------GVRHEPRPSQPAPVIIRFGAPGAQEAAAGGGEPTQSIGPA 64
Query: 66 GSSQENLVRDFSVQE-------NGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRM 118
G+S + ++ E R + + + + +K + + +
Sbjct: 65 GASTAPIAATPALGEQVAAKVVEPTRTEVAPPKPKPKPKPQTKAIAKPKPQAAKPSRPTA 124
Query: 119 PVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDA 178
S + N + G V K + S + +
Sbjct: 125 VASTRTQTSTGPQANNSNSIAGRRPEGAGQGGGVSGGGSGKGGNRHGQGSGAGALGMANY 184
Query: 179 IAIVRNRVIANWNIPSDFKR-FKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRE 237
+ + + PS +R ++ V++ F +++ G +L V G +L +
Sbjct: 185 HGTLVAWLNRHKRYPSRAQRLRQEGTVRVSFTIDRNGRILSHRIVTSSGHA-----LLDQ 239
Query: 238 NARKAVIKSQAFRLSPST 255
+ + ++ + PS
Sbjct: 240 EVQAMLKRASPVPVLPSG 257
>gi|300692238|ref|YP_003753233.1| protein tolA, inner membrane/periplasmic component of the tol-pal
system [Ralstonia solanacearum PSI07]
gi|299079298|emb|CBJ51970.1| protein tolA, inner membrane/periplasmic component of the tol-pal
system [Ralstonia solanacearum PSI07]
Length = 343
Score = 51.1 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/202 (12%), Positives = 58/202 (28%), Gaps = 7/202 (3%)
Query: 49 YHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQ 108
+ + + + + + Q+ ++ +E + K + + + + ++ +
Sbjct: 129 KEQKEQQARQAELQRRALAEQQAQAKERQAREKAAAEAQARKEAQLQAQAEAKAKAEADA 188
Query: 109 ALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKS 168
K A +Q+ ++A Q + + + +
Sbjct: 189 KQKAKAAAEAKAKADTEQRAAQAKASAQRQARLRDLQALAGAAGTTGAVAGSGGGVGSGT 248
Query: 169 SRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGT 228
S VR +V N N D V + Q+ G VL + G
Sbjct: 249 GAGGTASAGYADRVRAKVQPNINFYDDTSG--NPVVMVLVQMAPDGTVLSRRVTKSSG-- 304
Query: 229 ELVRRMLRENARKAVIKSQAFR 250
+L E +A+ S
Sbjct: 305 ---YPVLDEAVLRAIDMSSPLP 323
>gi|294626857|ref|ZP_06705449.1| TolA protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB
11122]
gi|292598871|gb|EFF43016.1| TolA protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB
11122]
Length = 346
Score = 51.1 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/242 (10%), Positives = 63/242 (26%), Gaps = 11/242 (4%)
Query: 33 ISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDF----SVQENGDRFSDQ 88
+ ++ + + + D + + QE R + ++ + +
Sbjct: 111 PTPQQAQAQERVAQPDKVDQERVDALAISAEKAKQEQEAKRRQEQIDLTERKRQEEAEQK 170
Query: 89 TKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKS 148
+ + E Q E A + ++ +Q+ Q +
Sbjct: 171 LRLAKQQEEADTKKKQAAAQQAAEEAERQKKIADIRRQRAQADKEMALAEQKLRQVAAAR 230
Query: 149 IDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHF 208
+ + S A ++ +V+A W P + + ++
Sbjct: 231 AQQASAAAATSAQPTAGQG-GTSTDLSAKYAAAIQQKVLAQWVRPPSVPPGQ--KCTINI 287
Query: 209 QLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPSTYKSWRNITLFFVP 268
+ G V+ + + AV+ +Q RN+T F
Sbjct: 288 RQLPGGSVMEAKVA----PGCPYDEAGQRSIEAAVLSAQPLPYRGFESVFQRNLTFVFTA 343
Query: 269 SK 270
Sbjct: 344 QD 345
>gi|21673467|ref|NP_661532.1| hypothetical protein CT0635 [Chlorobium tepidum TLS]
gi|21646571|gb|AAM71874.1| hypothetical protein CT0635 [Chlorobium tepidum TLS]
Length = 342
Score = 51.1 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/227 (10%), Positives = 52/227 (22%), Gaps = 7/227 (3%)
Query: 31 VPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTK 90
P++ + + + + + + E + + E +
Sbjct: 104 KPVAAVKKIPEKPPVKAPVKAPEPASKTQSAADERKKIAEPVAAVKKIPEKPPLKAPVKA 163
Query: 91 THATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSID 150
+ K Q E + + K + +N L +
Sbjct: 164 PEPAPKTQSAADERKNLQEALERLKSKSASQKAETGKSAAPSNLSSTLANLQKKVASGGG 223
Query: 151 TVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDF-KRFKKLRVKMHFQ 209
+ A + + + NW+ S + + V +
Sbjct: 224 GPARSGSGSGAGGGRYGTGGGGAF-DSYKARIADIIQNNWSFSSQMVRSTSGMEVYVSLL 282
Query: 210 LNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPSTY 256
+ G V L + + A+ KS F P Y
Sbjct: 283 ILPDGSVNEIRYDRKSSS-----EYLNNSVKNALAKSMPFPSLPREY 324
>gi|114778924|ref|ZP_01453718.1| hypothetical protein SPV1_12275 [Mariprofundus ferrooxydans PV-1]
gi|114550840|gb|EAU53407.1| hypothetical protein SPV1_12275 [Mariprofundus ferrooxydans PV-1]
Length = 303
Score = 51.1 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/288 (9%), Positives = 82/288 (28%), Gaps = 29/288 (10%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPV 61
R+ LA S+ +H++ +L L + L +++ V + + + + K + +
Sbjct: 12 RIAVALAASIAVHLLLVLFLGMTHHETPLAKKKAPQIMDVVLLDKDKKVNKQTPKDAKTI 71
Query: 62 VQF-----KGSSQENLVRDFSVQ-------------ENGDRFSDQTKTHATENETKRSSS 103
+++ + R + T +R +
Sbjct: 72 SNRNATGGSKQAEDRVTRHARAPVSGQQQRPRPAPPPQPKTPPPPAQEQRTRLLARRGPT 131
Query: 104 SKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLS 163
+ + + P K +N +S + ++
Sbjct: 132 PDMKPKPVKKSPPVKQKKPVVPAKQVPLSNLMPSAMALSQLSRDFQRERRMKQKLSREAD 191
Query: 164 KVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKR---FKKLRVKMHFQLNQKGFVLGKI 220
+ + + + + W R + + + G + G
Sbjct: 192 IPINTRQAKY--APYAQALVRALEEQWRPGQASYDKYPDDARRSLIKLTIERNGDLAGVE 249
Query: 221 NVDVVGGTELVRRMLRENARKAVIKSQAFRLSPSTYKSWR-NITLFFV 267
+ + + ++A +A+ + F++ P+++ R + L F
Sbjct: 250 ILHPSPIAQ-----INDSAVEAIHAAAPFKVLPTSWGLDRVSFYLTFE 292
>gi|46201351|ref|ZP_00055215.2| hypothetical protein Magn03009877 [Magnetospirillum magnetotacticum
MS-1]
Length = 369
Score = 51.1 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 18/89 (20%), Positives = 34/89 (38%), Gaps = 3/89 (3%)
Query: 182 VRNRVIANWNIPSDFKRFKKLR-VKMHFQLNQKGFVLGKINVDVVG--GTELVRRMLREN 238
+++R+ N+ P+ R +L + M LN G+V+ + R L N
Sbjct: 277 LKDRIGKNFRWPAVIDRRPRLVSLAMLVTLNNDGYVVDLKEDAHTSELDQDPDYRALAAN 336
Query: 239 ARKAVIKSQAFRLSPSTYKSWRNITLFFV 267
AR+A+ + + + R F
Sbjct: 337 ARQAIQAASPIPVPKGEFTGTRTFRYEFN 365
>gi|117923783|ref|YP_864400.1| TonB family protein [Magnetococcus sp. MC-1]
gi|117607539|gb|ABK42994.1| Cell division and transport-associated protein TolA [Magnetococcus
sp. MC-1]
Length = 335
Score = 51.1 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/223 (9%), Positives = 69/223 (30%), Gaps = 12/223 (5%)
Query: 48 DYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGE 107
D + K + + + + + +E L + + ++ R ++ E ++ ++ +
Sbjct: 123 DITPMRRKPDPKKIAEEQRAKEEALKKKQAEEK---RLQEEAAKKKQAEEQRKKEEARKQ 179
Query: 108 QALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEK 167
+ + +++ A + + K ++ + + +
Sbjct: 180 AEEQRKKEEARKQAEIKRKQELAAQQMREAIAKQQAEIKAQQQREEAIRQQQLREAALAQ 239
Query: 168 SSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGG 227
+ + +R W P ++ ++ G + G
Sbjct: 240 QQAEE--IRKWQGALREATYKAWRPPFGV-DISSMKCLATVKITVDGRLSLISISQTSG- 295
Query: 228 TELVRRMLRENARKAVIKSQAFRLSPSTYKSWR-NITLFFVPS 269
++ ++A+ ++ PS + R IT+ F PS
Sbjct: 296 ----FAPYDDSVQRAIAATRNLPKPPSHCSACRGEITISFTPS 334
>gi|21243869|ref|NP_643451.1| TolA protein [Xanthomonas axonopodis pv. citri str. 306]
gi|21109470|gb|AAM37987.1| TolA protein [Xanthomonas axonopodis pv. citri str. 306]
Length = 346
Score = 51.1 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/242 (10%), Positives = 63/242 (26%), Gaps = 11/242 (4%)
Query: 33 ISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDF----SVQENGDRFSDQ 88
+ ++ + + + D + + QE R + ++ + +
Sbjct: 111 PTPQQAQAQERVAQPDKVDQERVDALAISAEKAKQEQEAKRRQEQIDLTERKRQEEAEQK 170
Query: 89 TKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKS 148
+ + E Q E A + ++ +Q+ Q +
Sbjct: 171 LRLAKQQEEADAKKKQAAAQQAAEEAERQKKIADIRRQRAQADKEMALAEQKLRQVAAAR 230
Query: 149 IDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHF 208
+ + S A ++ +V+A W P + + ++
Sbjct: 231 AQQASAAAATSAQPTAGQG-GTSTDLSAKYAAAIQQKVLAQWVRPPSVPPGQ--KCTINI 287
Query: 209 QLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPSTYKSWRNITLFFVP 268
+ G V+ + + AV+ +Q RN+T F
Sbjct: 288 RQLPGGSVMEAKVA----PGCPYDEAGQRSIEAAVLSAQPLPYRGFESVFQRNLTFVFTA 343
Query: 269 SK 270
Sbjct: 344 QD 345
>gi|291287503|ref|YP_003504319.1| TonB family protein [Denitrovibrio acetiphilus DSM 12809]
gi|290884663|gb|ADD68363.1| TonB family protein [Denitrovibrio acetiphilus DSM 12809]
Length = 254
Score = 51.1 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/186 (12%), Positives = 62/186 (33%), Gaps = 7/186 (3%)
Query: 67 SSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQ 126
+ + + +E + + K + E+ A + ++ + Q
Sbjct: 54 KKRPVPITAKAPEETKPLMKVKPVIKKEITKAKVAKKKPVEKVKALEAPVFKEIAEPEPQ 113
Query: 127 KISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRV 186
A + + L ++ + + + + + S + + +R+++
Sbjct: 114 VELTAYEQVKSLPEVTPESETFTQEAPLVEEVVPD-AVPAPIDTSNLVSYEKLDKIRHKI 172
Query: 187 IANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIK 245
N + PS +R VK+ L+ G + +D G + L + K++ K
Sbjct: 173 KNNLSYPSAARRMGWTGVVKVEICLSPVGQLKNITILDSSG-----YKALDKIVLKSINK 227
Query: 246 SQAFRL 251
S F +
Sbjct: 228 SAPFNV 233
>gi|94500065|ref|ZP_01306600.1| hypothetical protein RED65_12534 [Oceanobacter sp. RED65]
gi|94427923|gb|EAT12898.1| hypothetical protein RED65_12534 [Oceanobacter sp. RED65]
Length = 367
Score = 51.1 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/182 (13%), Positives = 63/182 (34%), Gaps = 8/182 (4%)
Query: 72 LVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKA 131
+R S++ R Q E T + + + +S L ++K++
Sbjct: 173 PIRSQSLEAEQLRLEKQQFEKEQEALTLARIAVEKLEKKAKSQALDKVE---KQRKLAMQ 229
Query: 132 TNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWN 191
+E+ L+ ++ + +K+ + + + ++R + A
Sbjct: 230 KERERQLEKKREENERKRRQRLAALKEKQEEERQRLKEIQLAENIYYKQVLRKAMDAVVY 289
Query: 192 IPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRL 251
++R ++ VK+ +++ G V + + +L A + K+Q +
Sbjct: 290 PRRAYERGQEGLVKVRINIDKDGNVKNAVMIQSSKIN-----ILDAAAVMSAKKAQPYPK 344
Query: 252 SP 253
P
Sbjct: 345 VP 346
>gi|74318286|ref|YP_316026.1| TonB domain-containing protein [Thiobacillus denitrificans ATCC
25259]
gi|74057781|gb|AAZ98221.1| TonB domain protein [Thiobacillus denitrificans ATCC 25259]
Length = 283
Score = 50.7 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 30/249 (12%), Positives = 61/249 (24%), Gaps = 11/249 (4%)
Query: 2 RLENGLA---ISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNI-YNEDYHSSKYKKI 57
RL LA IS+ +H + L+ V + E +D + S+
Sbjct: 14 RLRRPLAAVWISIGVHAALVALIQVAPPTSRGVDPAVIEARLIDAWTQQREPAQSEAAPA 73
Query: 58 EEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLR 117
+ + E + ++ E +S
Sbjct: 74 PPTTRVAEARQSNERPAEPPRAEQPRSEPASPEVAPVRRPAAPDLEARAEARQGKSPDPA 133
Query: 118 MPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQD 177
+ + + +E E+ S V+ +
Sbjct: 134 PAPAQPAPGAAAAPVPAPAANEASEASEASEASEARRSVAPLEVTSAVDLTYYSARELDV 193
Query: 178 AIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRE 237
+R V P + V++ +L G V V + +
Sbjct: 194 QPRALREIVPDY--PPLADRSRISGTVRLQVELEADGRVRDVSVVSADPPG-----VFDD 246
Query: 238 NARKAVIKS 246
+AR A ++
Sbjct: 247 SARAAFREA 255
>gi|157962386|ref|YP_001502420.1| Tol-Pal system TolA [Shewanella pealeana ATCC 700345]
gi|157847386|gb|ABV87885.1| Tol-Pal system TolA [Shewanella pealeana ATCC 700345]
Length = 311
Score = 50.7 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 34/313 (10%), Positives = 87/313 (27%), Gaps = 56/313 (17%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
L + IS +H+ +++L + + D +
Sbjct: 7 LTLPVVISAGIHIGVIVILALGVDFSDKPKPQPQASAPAVQAVVVDQKRVAEHVEKLKAE 66
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHAT----ENETKRSSSSKGEQALKESALLRM 118
+ + +E +D + ++ + ++ + A E E K+ A A
Sbjct: 67 KREAERKEKARQDDADRKVREARKEREREQAQIKRLEQERKQKEIETKNAADAAKAAQLK 126
Query: 119 PVSPYDKQKISKATNKEQDL---------------------------------------- 138
+K ++A K+++
Sbjct: 127 QKQENEKAAKAEAERKQKEAERKASEEAAKKAADKRKAEEAAAKKAEDERKRKAEAERKR 186
Query: 139 QGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKR 198
+ A ++ + ++ ++ + Q +++R + N + +
Sbjct: 187 KAEEQARREQEQMMQDALAAEQAALSQTRNKQVMTEVQRYTSMIRATIQRNLVVDESMRG 246
Query: 199 FKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLS--PSTY 256
++ +L GFV +D ++ + A+ K+ +S P Y
Sbjct: 247 K---SCRVFIRLANDGFVTASQTLDGDS-------VVCRATKAAINKAGRLPVSSEPDVY 296
Query: 257 KSWRNITLFFVPS 269
+ I L P
Sbjct: 297 NKLKEINLTVQPE 309
>gi|294665410|ref|ZP_06730698.1| TolA protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB
10535]
gi|292604821|gb|EFF48184.1| TolA protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB
10535]
Length = 346
Score = 50.7 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/242 (9%), Positives = 62/242 (25%), Gaps = 11/242 (4%)
Query: 33 ISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDF----SVQENGDRFSDQ 88
+ ++ + + + D + + QE R + ++ + +
Sbjct: 111 PTPQQAQAQERVAQPDKVDQERVDALAISAEKAKQEQEAKRRQEQIDLTERKRQEEAEQK 170
Query: 89 TKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKS 148
+ + E Q E + ++ +Q+ Q +
Sbjct: 171 LRLAKQQEEADAKKKQAAAQQAAEEGERQKKIADIRRQRAQADKEMALAEQKLRQVAAAR 230
Query: 149 IDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHF 208
+ + S A ++ +V+A W P + + ++
Sbjct: 231 AQQASAAAATSAQPTAGQG-GTSTDLSAKYAAAIQQKVLAQWVRPPSVPPGQ--KCTINI 287
Query: 209 QLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPSTYKSWRNITLFFVP 268
+ G V+ + + AV+ +Q RN+T F
Sbjct: 288 RQLPGGSVMEAKVA----PGCPYDEAGQRSIEAAVLSAQPLPYRGFESVFQRNLTFVFTA 343
Query: 269 SK 270
Sbjct: 344 QD 345
>gi|317486272|ref|ZP_07945104.1| TolA protein [Bilophila wadsworthia 3_1_6]
gi|316922442|gb|EFV43696.1| TolA protein [Bilophila wadsworthia 3_1_6]
Length = 328
Score = 50.7 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 29/224 (12%), Positives = 71/224 (31%), Gaps = 9/224 (4%)
Query: 48 DYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGE 107
D + KK + + + ++ + + ++ ++ + + +
Sbjct: 110 DEVALAQKKQPKKPKDEEEEEPKEKPKEKPKDDGKKDKKEASENAKKTDDKAKPAKESDK 169
Query: 108 QALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEK 167
+ + + D +K + + ++ G S D
Sbjct: 170 KKDGVDPSKALADALNDAKKKAGTSRGTKEKGGKSSVAGALADFQKSAGGAGGGGGGEGD 229
Query: 168 SSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGG 227
+ V V NW++P+ + L V+++ +L+ G VL G
Sbjct: 230 GPGGGGIYDVYMGQVILAVRPNWSMPTYSRA--NLSVQVNVKLDPNGKVLSCTVARSSGR 287
Query: 228 TELVRRMLRENARKAVIKSQAFRLSPSTYKSWRNITLFFVPSKM 271
E + +A AVI+++ P+ + + L F +M
Sbjct: 288 AE-----VDASAVNAVIRTKVLPAPPTPDQQ--ELLLTFNTQEM 324
>gi|188577429|ref|YP_001914358.1| protein TolA [Xanthomonas oryzae pv. oryzae PXO99A]
gi|188521881|gb|ACD59826.1| protein TolA [Xanthomonas oryzae pv. oryzae PXO99A]
Length = 322
Score = 50.7 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/242 (10%), Positives = 63/242 (26%), Gaps = 11/242 (4%)
Query: 33 ISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDF----SVQENGDRFSDQ 88
+ ++ + + + D + QE R + ++ + +
Sbjct: 87 PTPQQAQAQERVAQPDKVDQDRVDALAISAEKARQEQEAKRRQEQIDLTERKRQEEAEQK 146
Query: 89 TKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKS 148
+ + E Q E A + ++ +Q+ + Q +
Sbjct: 147 LRLAKQQEEADAKKKQAAAQQAAEDAERQKKIADIRRQRAQADKDMALAEQKLRQVAAAR 206
Query: 149 IDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHF 208
+ + S A ++ +V+A W P + + ++
Sbjct: 207 AQQSSAATATSAQPTAGQG-GTSTDLSAKYAAAIQQKVLAQWVRPPSVPPGQ--KCTINI 263
Query: 209 QLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPSTYKSWRNITLFFVP 268
+ G V+ + + AV+ +Q RN+T F
Sbjct: 264 RQLPGGSVMEAKVA----PGCPYDEAGQRSIEAAVLSAQPLPYRGFESVFQRNLTFVFTA 319
Query: 269 SK 270
Sbjct: 320 QD 321
>gi|304393124|ref|ZP_07375052.1| putative proline rich protein [Ahrensia sp. R2A130]
gi|303294131|gb|EFL88503.1| putative proline rich protein [Ahrensia sp. R2A130]
Length = 297
Score = 50.7 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/182 (12%), Positives = 55/182 (30%), Gaps = 6/182 (3%)
Query: 1 MRLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP 60
+++ +G IS I+H + L++L + E + V+ + K + +P
Sbjct: 11 LKVTSGSVISAIIHGLVLIVLTVD-PSNSRPEPQEPEAIQVELVPPVKKIDPKPSEKPKP 69
Query: 61 VVQFKGSSQENLVRDFSVQENGDRFSD-----QTKTHATENETKRSSSSKGEQALKESAL 115
VV+ S++ + + + +R + E + + S
Sbjct: 70 VVEQVPESKKTKLVEKPKVKPPERLRPVYKFGEEDAGTEEPVKNETPIEEKIAKALPSEA 129
Query: 116 LRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPS 175
+ + ++ + +Q + V R S R S
Sbjct: 130 AATRDTEPEPAASKPPVSEAEPVQAAILRPATPVSRPVRRAKAVRKNKPTRSSQGNRSRS 189
Query: 176 QD 177
+
Sbjct: 190 KT 191
>gi|294140560|ref|YP_003556538.1| tolA protein [Shewanella violacea DSS12]
gi|293327029|dbj|BAJ01760.1| tolA protein [Shewanella violacea DSS12]
Length = 319
Score = 50.7 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/247 (10%), Positives = 68/247 (27%), Gaps = 12/247 (4%)
Query: 25 FNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDR 84
Q+ +RE E K + + V K + + Q+
Sbjct: 81 LERQVTQARQKRESEQAQIKKLEIERKLKEIETKNAVAAAKAAQLKQKQEKEKAQQAEKV 140
Query: 85 FSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFA 144
+ K + + + K +Q + + + E+ +
Sbjct: 141 RKQKEKEREASEKAAKKAEVKRKQEEAAAKKAADDRKRKADAERKRKEEAERKRKAEERE 200
Query: 145 EKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRV 204
+ + ++ ++ + Q +++R + + +
Sbjct: 201 RQLQEQMMQDALAEEHTALSQTRNKQVMSEVQRYTSMIRATIQRQLVVNESMRGK---SC 257
Query: 205 KMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLS--PSTYKSWRNI 262
++ +L GFV G + ++ + A+ K+ +S P Y + I
Sbjct: 258 RIFIRLANDGFVTGTKILSGDS-------VVCRATKVAINKAGRLPVSSEPDVYDKLKEI 310
Query: 263 TLFFVPS 269
L P
Sbjct: 311 NLTVQPE 317
>gi|83311992|ref|YP_422256.1| periplasmic protein TonB, links inner and outer membranes
[Magnetospirillum magneticum AMB-1]
gi|82946833|dbj|BAE51697.1| Periplasmic protein TonB, links inner and outer membranes
[Magnetospirillum magneticum AMB-1]
Length = 255
Score = 50.7 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/161 (14%), Positives = 51/161 (31%), Gaps = 13/161 (8%)
Query: 124 DKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRI-PSQDAIAIV 182
+ ++ A + E + + P +++ +Q +
Sbjct: 95 QRPQLQAAPHAETSKAPQASTRPEPAKPAGQSPTLSSDSGNFSRAAPAAGDLAQSTQDKI 154
Query: 183 RNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLR------ 236
+V+ W+ + R + +N+ G + G +N D + V R
Sbjct: 155 LAQVLRMWHFNAGALRGTDTILSATLIVNRDGTLSGPMNKDAPWNPDSVIRGYSSLPDGT 214
Query: 237 -----ENARKAVIKSQAFRLSPSTYKSW-RNITLFFVPSKM 271
E A+ +Q ++ P K W R + L F P +
Sbjct: 215 NKRMLETFLLALRMAQPLQMPPDDGKPWPRRMLLRFKPGDL 255
>gi|114319405|ref|YP_741088.1| TonB family protein [Alkalilimnicola ehrlichii MLHE-1]
gi|114225799|gb|ABI55598.1| Cell division and transport-associated protein TolA
[Alkalilimnicola ehrlichii MLHE-1]
Length = 333
Score = 50.7 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 10/102 (9%), Positives = 27/102 (26%), Gaps = 7/102 (6%)
Query: 153 VVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQ 212
++E + ++ + + + W PS L + +L++
Sbjct: 221 AEERARQEAIEAERRAREVQQTVGSYAGRISAELRRAWVRPSGTPA--GLEALVRIRLSR 278
Query: 213 KGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPS 254
G V G + +A ++ +
Sbjct: 279 HGDVQEVTITRGSGND-----AFDASVVRAAYRAAPLPMPDD 315
>gi|319899975|ref|YP_004159703.1| TonB family protein [Bacteroides helcogenes P 36-108]
gi|319415006|gb|ADV42117.1| TonB family protein [Bacteroides helcogenes P 36-108]
Length = 271
Score = 50.7 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/219 (10%), Positives = 64/219 (29%), Gaps = 2/219 (0%)
Query: 4 ENGLAISMILHVMFL-LLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
G+ ++++HV F+ +L+ F V ++ + +++
Sbjct: 9 YAGIIGALLIHVAFITILMLVGFAVPRPPEEDGMPVMLGEVPDALGMADPSLVEVDVAPE 68
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
+ +E ++ QE+ + + K+ + E K + E+A +
Sbjct: 69 EKVPQMEEAGEQNIITQEDEETVVLKPKSDPKKKEVKNPEKTTAEKAAEARKQAEAKAEK 128
Query: 123 YDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIV 182
++ A + G ++ + ++
Sbjct: 129 ERREAEEAARRRVSGAFGKGAQMGSKGNSEGKGIQGAPTGNAATGATSGIGGYGTFNLGG 188
Query: 183 RNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKIN 221
R+ + + + RV + +N G V+
Sbjct: 189 RS-IGEGGLPRPVYNVQDEGRVVVTITVNPAGQVIATDI 226
>gi|90408531|ref|ZP_01216688.1| TolA-like protein [Psychromonas sp. CNPT3]
gi|90310350|gb|EAS38478.1| TolA-like protein [Psychromonas sp. CNPT3]
Length = 323
Score = 50.7 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 32/238 (13%), Positives = 79/238 (33%), Gaps = 24/238 (10%)
Query: 46 NEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSK 105
++ + K E+ V K +QE R V+ D E +
Sbjct: 95 AQEKRKVEEAKREKKRVLDKKMAQEKAKRVAEVKRVADAKRVAEVKRVAEVKRVAEVKRV 154
Query: 106 GEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKEL---- 161
E E K K K K ++ Q ++ +K + ++ ++
Sbjct: 155 AEVKRVEDEKRVAQEKRSAKLKEQKRIAKLKETQRLAKIKKIQKEARDIKERLRQAELDK 214
Query: 162 --------LSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQK 213
++++K ++ +++++++ NW I K R +++ L
Sbjct: 215 AMEAEFVDAFSEAQNTQKLTETEKYKSLIKDKISRNWQIEPSMKGK---RCRLNISLAPD 271
Query: 214 GFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPSTY--KSWRNITLFFVPS 269
G V+ + + ++A++A +K++ + +R ++ P
Sbjct: 272 GLVINVKVLSGDAK-------VCQSAQRATLKARTLPIPKDASIASQFRKFSITLAPE 322
>gi|237749087|ref|ZP_04579567.1| conserved hypothetical protein [Oxalobacter formigenes OXCC13]
gi|229380449|gb|EEO30540.1| conserved hypothetical protein [Oxalobacter formigenes OXCC13]
Length = 290
Score = 50.7 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/253 (10%), Positives = 63/253 (24%), Gaps = 16/253 (6%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
L +A+S+++H +L + F + + V + +
Sbjct: 17 LGIAIAVSVLIHA-IVLSVKFVTPATSGFRHTSPVIEVV--LSGGGGNGLGTGSAGANNN 73
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
+ +++ + T + + S K + + + S
Sbjct: 74 ISATVVNAQAAVEKMPEKHVLKNKPAESRPITSLSKQGNQKSIPVPETKTNPVQKNAHSS 133
Query: 123 YDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIV 182
++ + S + + V
Sbjct: 134 NKG--GTQNGYGGTGGGRGEGDSVVFNRNARGGYAYGNGSGQAITSQTRDVGDAMYFKSV 191
Query: 183 RNRVIANWNIPSDFKRFKKL--RVKMHFQLNQKGFV----LGKINVDVVGGTELVRRMLR 236
+ +V + I K +L ++ + + G + G V G L
Sbjct: 192 QKKVESIGVINFPQKNGTRLYGQLTVRINVYHDGSLYEKAGGVSVVKSSGN-----PALD 246
Query: 237 ENARKAVIKSQAF 249
A K V ++ F
Sbjct: 247 AAALKIVRRAAPF 259
>gi|254525247|ref|ZP_05137302.1| ferric siderophore transporter, periplasmic energy transduction
protein TonB [Stenotrophomonas sp. SKA14]
gi|219722838|gb|EED41363.1| ferric siderophore transporter, periplasmic energy transduction
protein TonB [Stenotrophomonas sp. SKA14]
Length = 239
Score = 50.7 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 15/181 (8%), Positives = 44/181 (24%), Gaps = 9/181 (4%)
Query: 75 DFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNK 134
+ + + + ++ + + A ++ D
Sbjct: 47 ELAPMAQAPPVPPREVATGPLQQQQQRQAPTPAVREQPKAPVQPQG---DLPPPKAPEPT 103
Query: 135 EQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPS 194
+ + S V + + + + + + P
Sbjct: 104 PSPDGADANVAQTSAPPQVAADAATRYTAPQTTAGERSRAEATWEGRLLGHLQKHRRYPR 163
Query: 195 DFKR-FKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSP 253
+R ++ V + F + + G V G G +L + V ++ P
Sbjct: 164 QAERLRQQGVVYVRFAVARDGAVSGLKLGRSSG-----FELLDQETLDTVQRASPVPAPP 218
Query: 254 S 254
+
Sbjct: 219 A 219
>gi|325294843|ref|YP_004281357.1| TonB family protein [Desulfurobacterium thermolithotrophum DSM
11699]
gi|325065291|gb|ADY73298.1| TonB family protein [Desulfurobacterium thermolithotrophum DSM
11699]
Length = 291
Score = 50.7 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 36/269 (13%), Positives = 82/269 (30%), Gaps = 25/269 (9%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNI-YNEDYHSSKYKKIEEPVVQF 64
+S++LH+ FL + + ++ S+ + ++ +K KK + +
Sbjct: 11 SFFVSLLLHIPFLYFDFHVPSQKVKKENIVTLDFSISSTESMKNKSENKQKKERKQARKN 70
Query: 65 KGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPY- 123
+++ + + + E + + K + K + V
Sbjct: 71 YPKKVKSVKKKIRKKVEKKIVKKIKQPTRKEKKISKEIIEKKNEIAKVKKTEKTQVPKTL 130
Query: 124 --------DKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPS 175
K + S+ + F K + + SS + S
Sbjct: 131 ESMKQNHIQKTEKSQKKEQVDSFSRKDFFVSKKTENKQTFYKEHVFTKSFTLSSVNKSLS 190
Query: 176 Q---------DAIAIVRNRVIANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKINVDVV 225
I ++ + P KRF + +V + +++KG + V
Sbjct: 191 LSRKKEFDKCKYIGLIIEEIEKKKFYPRLAKRFGIEGKVILKIVIDRKGNLESVSIVKTS 250
Query: 226 GGTELVRRMLRENARKAVIKSQAFRLSPS 254
G ++L + A K + K + L P
Sbjct: 251 GS-----KVLDKAALKLIKKCKFPPLPPE 274
>gi|120601329|ref|YP_965729.1| TonB family protein [Desulfovibrio vulgaris DP4]
gi|120561558|gb|ABM27302.1| TonB family protein [Desulfovibrio vulgaris DP4]
gi|311235154|gb|ADP88008.1| TonB family protein [Desulfovibrio vulgaris RCH1]
Length = 221
Score = 50.7 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/103 (20%), Positives = 37/103 (35%), Gaps = 10/103 (9%)
Query: 165 VEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDV 224
+ A V V +W+ P + + L V++ ++ G VL
Sbjct: 124 DAGQPAPQQGGDPYAAQVMAAVRKHWSPPP--VQGEHL-VRVRVRVGDDGKVLDYAIDTA 180
Query: 225 VGGTELVRRMLRENARKAVIKSQAFRLSPSTYKSWRNITLFFV 267
G E + A +AV ++ A + P+ R+I L F
Sbjct: 181 SGVAE-----VDAAALRAVSQAGAMPVPPAGAA--RDIVLSFT 216
>gi|46581505|ref|YP_012313.1| hypothetical protein DVU3102 [Desulfovibrio vulgaris str.
Hildenborough]
gi|46450927|gb|AAS97573.1| hypothetical protein DVU_3102 [Desulfovibrio vulgaris str.
Hildenborough]
Length = 195
Score = 50.7 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/103 (20%), Positives = 37/103 (35%), Gaps = 10/103 (9%)
Query: 165 VEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDV 224
+ A V V +W+ P + + L V++ ++ G VL
Sbjct: 98 DAGQPAPQQGGDPYAAQVMAAVRKHWSPPP--VQGEHL-VRVRVRVGDDGKVLDYAIDTA 154
Query: 225 VGGTELVRRMLRENARKAVIKSQAFRLSPSTYKSWRNITLFFV 267
G E + A +AV ++ A + P+ R+I L F
Sbjct: 155 SGVAE-----VDAAALRAVSQAGAMPVPPAGAA--RDIVLSFT 190
>gi|170742581|ref|YP_001771236.1| hypothetical protein M446_4461 [Methylobacterium sp. 4-46]
gi|168196855|gb|ACA18802.1| hypothetical protein M446_4461 [Methylobacterium sp. 4-46]
Length = 161
Score = 50.3 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 16/66 (24%), Positives = 25/66 (37%), Gaps = 3/66 (4%)
Query: 186 VIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIK 245
+ A W+ P + +V + L + G + G V RR L E A++AV
Sbjct: 71 LAACWDPPPGL---GRGQVTLRLSLTRDGRLAGVPRVTFASLPPERRRPLVEAAQRAVRA 127
Query: 246 SQAFRL 251
L
Sbjct: 128 CTPVAL 133
>gi|33593934|ref|NP_881578.1| hypothetical protein BP3003 [Bordetella pertussis Tohama I]
gi|33564008|emb|CAE43274.1| putative membrane protein [Bordetella pertussis Tohama I]
gi|332383353|gb|AEE68200.1| hypothetical protein BPTD_2971 [Bordetella pertussis CS]
Length = 299
Score = 50.3 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/243 (9%), Positives = 61/243 (25%), Gaps = 13/243 (5%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
G AIS+++H L F S E++ + + ++
Sbjct: 29 GTAISLLVHAGALAW-RFAGPAPARPQASTLEIV---LVNARTDSAPVTAQVLAQSQVDG 84
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
G + + + + G + + + + +S
Sbjct: 85 GGNAARGLAATPLPQTGRNAETIVLEAMRKRQAQLEAEQDRLLTQLQSQARTGQERQPVH 144
Query: 126 QKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQD--AIAIVR 183
+ + + I T+ R + E + S+ + R
Sbjct: 145 PWPDASEPGLDPREQPGVIQNAQIATLANRVQAYNAQPRKEFVAPAAQASRHAAYLDAWR 204
Query: 184 NRVIANWNIPSDFKRFKKL--RVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARK 241
R+ ++ +++ + G + +L + AR+
Sbjct: 205 TRIETIGTRHYPEDARGRIYGSLRITVTVRADGSLADFEIDQPSPHA-----VLNQAARR 259
Query: 242 AVI 244
V
Sbjct: 260 IVQ 262
>gi|220933629|ref|YP_002512528.1| TonB family protein [Thioalkalivibrio sp. HL-EbGR7]
gi|219994939|gb|ACL71541.1| TonB family protein [Thioalkalivibrio sp. HL-EbGR7]
Length = 284
Score = 50.3 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 33/282 (11%), Positives = 79/282 (28%), Gaps = 28/282 (9%)
Query: 6 GLAISMILHVMFLLLLY--------FNFN---------VQLLVPISRREMLSVDNIYNED 48
L IS+++H++ L + + + E LS E
Sbjct: 7 ALLISVLVHLVLLWGDWAMPVLQRDVSLPGSRPLDVALMPARPTQPEPEPLSSAEPEPEP 66
Query: 49 YHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQ 108
+ + EP + + + + + + + E E + + E
Sbjct: 67 EPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEP 126
Query: 109 ALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKS 168
+ + P + + ++ ++ V+ P +
Sbjct: 127 EPEPEPAVEQVPEPREDPAPATPRESV-PVERSEPDAERQRPEAVMPPAEPVTPQDAPSE 185
Query: 169 SRKRIPSQDAIAIVRNRVIANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKINVDVVGG 227
+ D +R + P R + + + F++ G + ++ G
Sbjct: 186 TLDADLMADYQDRLRAAIEREKRYPRLAVRQQLQGIALVGFRVLGDGRIEAIRLMESSGH 245
Query: 228 TELVRRMLRENARKAVI---KSQAFRLSPSTYKSWRNITLFF 266
+L E A AV ++Q ++ + I L F
Sbjct: 246 N-----LLDEAALAAVRQVGRAQPLPAGAGPFRDF-EIALEF 281
>gi|238018774|ref|ZP_04599200.1| hypothetical protein VEIDISOL_00632 [Veillonella dispar ATCC 17748]
gi|237864540|gb|EEP65830.1| hypothetical protein VEIDISOL_00632 [Veillonella dispar ATCC 17748]
Length = 264
Score = 50.3 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 30/250 (12%), Positives = 68/250 (27%), Gaps = 18/250 (7%)
Query: 4 ENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQ 63
+ IS ++H++ L + F ++ I E +D + +
Sbjct: 8 KKAAIISAVVHLIALFIAVIFF--VVVPAIQDMETYEIDLTQSVLDDGGSGHAGGGGGNR 65
Query: 64 FKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPY 123
+ + + + + T + GE S
Sbjct: 66 SDLFPKPLSADEVAARTKAVVANVDPSTARDIPDAVDVPPKGGEHKGNTSG--------- 116
Query: 124 DKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVR 183
D G + + + + + + + + R
Sbjct: 117 DNSTGGSGPGHGGGSGGGNGTGDGTGNGDGQGQGNGKGDGTGKGDGHGTVKAAFDVEGFR 176
Query: 184 NRVIANWNIPSDF-KRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKA 242
RV N +PS KR + V + L+ G ++G+ V + + A A
Sbjct: 177 ARVQDNAQMPSMALKRKLQGDVTVQVTLDTNGSLIGQSIVYSTN------EIFNDAAMSA 230
Query: 243 VIKSQAFRLS 252
V+ + ++
Sbjct: 231 VVAATPYKNP 240
>gi|114327769|ref|YP_744926.1| hypothetical protein GbCGDNIH1_1105 [Granulibacter bethesdensis
CGDNIH1]
gi|114315943|gb|ABI62003.1| hypothetical secreted protein [Granulibacter bethesdensis CGDNIH1]
Length = 324
Score = 50.3 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 36/317 (11%), Positives = 70/317 (22%), Gaps = 51/317 (16%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDN------IYNEDYHSSKYKK 56
L G AIS +HV+ L ++ + + V+ +
Sbjct: 8 LSRGAAISFAVHVLVLAIIMIGIPFTPPPSPPEDKSVEVEFEGPAQTARKAEQSGQVAAP 67
Query: 57 IEEPVVQFKGSSQEN------------------------------LVRDFSVQENGDRFS 86
+ K ++ + +E S
Sbjct: 68 ADREDNDEKETATQPPKPQPTEPPPPPPPPPPPPPTSAPAAPSPVQPEPQPPREESPEPS 127
Query: 87 DQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEK 146
+ + + P + ++ N D +
Sbjct: 128 PVAPPPPPAPPRPVQQAQPAPPSPIPPPPKPVEAPPSKTHQPNETKNPAADSPANENTLE 187
Query: 147 KSIDTVVVRPDKKE-----------LLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSD 195
K++ + + S S V +RV W I +
Sbjct: 188 KALAKLQKQTKPPTAHPNPASGARRNGGGSPTSDDTASLSAVQRGAVGDRVRECWTIDAG 247
Query: 196 FKRFKKLRVKMHFQLNQKGFVLGKIN--VDVVGGTELVRRMLRENARKAVI--KSQAFRL 251
+ K V + G + + V R E AR+AV+ + L
Sbjct: 248 AENVKDFSVILDVDTRPGGIAYRATIDPAEAGKMSNPVFRAFAERARRAVLDSRCATLPL 307
Query: 252 SPSTYKSWRNITLFFVP 268
+ F P
Sbjct: 308 PSELAGKPSSFKFRFRP 324
>gi|251773183|gb|EES53736.1| TonB family protein [Leptospirillum ferrodiazotrophum]
Length = 353
Score = 50.3 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 32/225 (14%), Positives = 71/225 (31%), Gaps = 13/225 (5%)
Query: 43 NIYNEDYHSSKYKKIEEPVVQFKGSSQENLVR-DFSVQENGDRFSDQTKTHATENETKRS 101
+ + + E P K + + SV+ + + + T ++S
Sbjct: 126 MVPHRPVPPELMARTEAPREAPKADNSPGFRQVKKSVRHEKENHAKALRGRVTPKPDQKS 185
Query: 102 SSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKEL 161
+ K E ++ P++ +KI + L EK + + + +
Sbjct: 186 AQPKKTVQKPEKPVVSHPLTKEQIRKILAQESLGNPLTQHLDLEKTAPAYSDRQSELDRI 245
Query: 162 LSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFK-RFKKLRVKMHFQLNQKGFVLGKI 220
+ +E + I ++ R P D R R + F +N G +
Sbjct: 246 AANLEDETYSS-----YIRRIQERFETIGEYPPDAAARGTTGRALVTFTINADGTLAAAD 300
Query: 221 NVDVVGGTELVRRMLRENARKAVIKSQAFRLSPSTYKSWRNITLF 265
G L E + + V + + P ++ +++TL
Sbjct: 301 LTQSSGSA-----ALDEESLRIVRVAAPYIPLPDSFHK-KSLTLT 339
>gi|167538573|ref|XP_001750949.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163770537|gb|EDQ84225.1| predicted protein [Monosiga brevicollis MX1]
Length = 1536
Score = 50.3 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 8/155 (5%), Positives = 23/155 (14%), Gaps = 1/155 (0%)
Query: 26 NVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRF 85
+ P ++ ++ K
Sbjct: 1245 PPVVEPPAAKPPVVEP-PAAKPPVVEPPAAKPPVVEPPAAKPPVVEPPAAKPPLVEPPAA 1303
Query: 86 SDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAE 145
+ ++ A V P + + A
Sbjct: 1304 KPPVVEPPAAKPPVVEPPAAKPPVVEPPAAKPPLVEPPAAKPPVVEPPAAKPPVVEPPAA 1363
Query: 146 KKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIA 180
K + + + S++
Sbjct: 1364 KPPVVEPTATQGAELEAIPAPAKNMDDTLSEETSD 1398
Score = 49.5 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 15/155 (9%), Positives = 37/155 (23%)
Query: 26 NVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRF 85
+ P ++ ++ K K E V E
Sbjct: 1255 PPVVEPPAAKPPVVEPPAAKPPVVEPPAAKPPVVEPPAAKPPLVEPPAAKPPVVEPPAAK 1314
Query: 86 SDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAE 145
+ A + ++K +A + P K + + + + + +
Sbjct: 1315 PPVVEPPAAKPPVVEPPAAKPPLVEPPAAKPPVVEPPAAKPPVVEPPAAKPPVVEPTATQ 1374
Query: 146 KKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIA 180
++ + + E S A+A
Sbjct: 1375 GAELEAIPAPAKNMDDTLSEETSDNGVTAEDAALA 1409
Score = 45.3 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 18/155 (11%), Positives = 41/155 (26%), Gaps = 11/155 (7%)
Query: 26 NVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRF 85
+ P ++ ++ K K E V E
Sbjct: 1275 PPVVEPPAAKPPVVE----------PPAAKPPLVEPPAAKPPVVEPPAAKPPVVEPPAAK 1324
Query: 86 SDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATN-KEQDLQGISFA 144
+ A + ++K +A + P K + + T + +L+ I
Sbjct: 1325 PPVVEPPAAKPPLVEPPAAKPPVVEPPAAKPPVVEPPAAKPPVVEPTATQGAELEAIPAP 1384
Query: 145 EKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAI 179
K DT+ + ++ + P+ +
Sbjct: 1385 AKNMDDTLSEETSDNGVTAEDAALAEDEEPAAADV 1419
>gi|78485242|ref|YP_391167.1| hypothetical protein Tcr_0897 [Thiomicrospira crunogena XCL-2]
gi|78363528|gb|ABB41493.1| TolA protein [Thiomicrospira crunogena XCL-2]
Length = 341
Score = 50.3 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 27/223 (12%), Positives = 64/223 (28%), Gaps = 5/223 (2%)
Query: 46 NEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSK 105
E + + K++ E Q + Q+ E + + + E + + + +
Sbjct: 124 AEQRKADEAKRLAEIERQKVLAEQKRAQEAKRSAEKAKKEALLAEKKREEAKQLVAEAQQ 183
Query: 106 GEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKV 165
Q + + + + + ++ +++ +
Sbjct: 184 KRQQEEAKKKALEEQIQKHNAEKKRLEAEALQAKLRREQLQQEAALQRQLEEEEAKKRQA 243
Query: 166 EKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVV 225
K + I+ + V NW + K +K + KG +
Sbjct: 244 AKQKEMLSLRETYISSIAASVKDNWR--TAAKVSEKAECVVSITQTPKGMISSVKVEKCN 301
Query: 226 GGTELVRRMLRENARKAVIKSQAFRLSPSTYKSWRNITLFFVP 268
+ ++A KAV +++ P RNI F P
Sbjct: 302 KFANEQFK---KDAEKAVYRAEPLPQPPIKELFERNIKFIFNP 341
>gi|253997649|ref|YP_003049713.1| TonB family protein [Methylotenera mobilis JLW8]
gi|253984328|gb|ACT49186.1| TonB family protein [Methylotenera mobilis JLW8]
Length = 327
Score = 50.3 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 28/286 (9%), Positives = 81/286 (28%), Gaps = 42/286 (14%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
+ L+IS+++H++ L + F +L + +L V + + + ++
Sbjct: 24 MSIALSISLLIHLVVLSIH---FEPELKKFRDQLPVLEVMLVNTKTKSKPQNTEVYAQAN 80
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESAL------- 115
+G + + + + + N + + +++ K+S
Sbjct: 81 LDRGGNTDLDRQMKTALPALKQQQADVTLKPVVNAKQAAKAAEQPTEEKQSKKNVAVLEK 140
Query: 116 --------------------LRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVR 155
++ + D + K + A + ++
Sbjct: 141 QAQALMTQLEATHRVESQPVQKVSATEVDTAPQENLSKKINLQDVTAAALEMDRLEALIS 200
Query: 156 PDKKELLSKVEKS----SRKRIPSQDAIAIVRNRVIANWNIPSDFKRFK---KLRVKMHF 208
+ E + ++ + + R +V N+ +++M
Sbjct: 201 KQQDEYQKRPKRKFVGGRAQEYRYALYVEAWRQKVEKIGNLNYPEAAKNLKLYGQLQMTV 260
Query: 209 QLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPS 254
+ G + G ++L AR V + + P
Sbjct: 261 SIKADGSIESIEINRSSG-----HKVLDAAARHIVELAAPYAKFPD 301
>gi|300022276|ref|YP_003754887.1| TonB family protein [Hyphomicrobium denitrificans ATCC 51888]
gi|299524097|gb|ADJ22566.1| TonB family protein [Hyphomicrobium denitrificans ATCC 51888]
Length = 321
Score = 50.3 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 34/267 (12%), Positives = 70/267 (26%), Gaps = 32/267 (11%)
Query: 12 ILHVMFLLLLYFNFNVQLLVPISRREMLSV-----DNIYNEDYHSSKYKKIEEPVVQFKG 66
+ H L + + E +SV D + S V + G
Sbjct: 52 LFHGSVLATFLYLAKQKPGAIEQPTEAISVASLQSDVLEAVSAAQSAAAVSASSVDETVG 111
Query: 67 SSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALK--------------- 111
+E+ S + + Q T A + + +G ++
Sbjct: 112 EIKESAAAQPSQAQEFEADEPQHTTPAATEISNSAVLPEGLDLVRGAFESERGAGDETGA 171
Query: 112 ---ESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKS 168
+ + ++ K Q + ++ K + +
Sbjct: 172 ADVTAEAGAPERNVREQSASRKPRTSAQARLNHDRSSQRKQKGAASIRAKSGAQASAGRV 231
Query: 169 SRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGT 228
S + + A+VR RV + V + F +++ G + G
Sbjct: 232 SASSGSALNYAALVRARVAG----RRPGGNGGRGTVVVAFSVSRAGALNSARIARSSGN- 286
Query: 229 ELVRRMLRENARKAVIKSQAFRLSPST 255
L + AV + F P+T
Sbjct: 287 ----LSLDSSVLAAVRGASPFPPPPAT 309
>gi|33598430|ref|NP_886073.1| hypothetical protein BPP3923 [Bordetella parapertussis 12822]
gi|33603370|ref|NP_890930.1| hypothetical protein BB4396 [Bordetella bronchiseptica RB50]
gi|33574559|emb|CAE39206.1| putative membrane protein [Bordetella parapertussis]
gi|33577494|emb|CAE34759.1| putative membrane protein [Bordetella bronchiseptica RB50]
Length = 299
Score = 50.3 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 28/245 (11%), Positives = 66/245 (26%), Gaps = 17/245 (6%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDN-IYNEDYHSSKYKKIEEPVVQF 64
G AIS+++H L F S E++ V+ + + + +
Sbjct: 29 GTAISLLVHAGALAW-RFAGPAPARPQASTLEIVLVNARTDSAPVTAQVLAQSQVDGGGN 87
Query: 65 KGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYD 124
+ + + + + E ++ Q+ + R PV P+
Sbjct: 88 AARGLAATPLPQTGRNAETIVLEAMRKRQAQLEAEQDRLLTQLQSQARTGQERQPVHPWP 147
Query: 125 KQKISKATNKEQD---LQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAI 181
+EQ + +P K+ + + S +
Sbjct: 148 DASEPGLDPREQPGVIQNAQIATLASRVQAYNAQPRKEFVAPAAQASRHAA-----YLDA 202
Query: 182 VRNRVIANWNIPSDFKRFKKL--RVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENA 239
R R+ ++ +++ + G + +L + A
Sbjct: 203 WRTRIETIGTRHYPEDARGRIYGSLRITVTVRADGSLADFEIDQPSPHA-----VLNQAA 257
Query: 240 RKAVI 244
R+ V
Sbjct: 258 RRIVQ 262
>gi|127512455|ref|YP_001093652.1| TolA family protein [Shewanella loihica PV-4]
gi|126637750|gb|ABO23393.1| TolA family protein [Shewanella loihica PV-4]
Length = 311
Score = 50.3 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 33/310 (10%), Positives = 83/310 (26%), Gaps = 58/310 (18%)
Query: 7 LAISMILHVMFLLLLYFNFNVQLLVPI------SRREMLSVDNIYNEDYHSSKYKKIEEP 60
L IS +HV +++L + + + + VD + +
Sbjct: 11 LIISASIHVGVIVVLAMGVDFSEKPKVVPQASAPAVQAVVVDQKRVNEQVEKLKAEKLA- 69
Query: 61 VVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPV 120
+ + + QE L R + + ++ ++ ++A L+
Sbjct: 70 AERKEKARQEELDRKAKEARQAREREQERIKKLEQERKQKELETQNAAKAAKAAKLKEQQ 129
Query: 121 SPYDKQKISKATNK---------------------------------------EQDLQGI 141
K + E +
Sbjct: 130 EKEKAAKAEAQRKQKEAERKAAEEAAAKAEAKRKAEEAAAKKAAEERKRKEEAEAKRKAE 189
Query: 142 SFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKK 201
A ++ + ++ ++ + Q +++R + + + +
Sbjct: 190 EAARREQERMMQEALAAEQAALSQTRNKQVMSEVQRYTSMIRATIQRHLVVDESMRGK-- 247
Query: 202 LRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSP--STYKSW 259
++ +L + GFV G V ++ + A+ K+ +SP Y
Sbjct: 248 -SCRVFIRLAKDGFVTGNEIV-------SGDPVVCRATKAAINKAGRLPVSPEADVYNKL 299
Query: 260 RNITLFFVPS 269
+ I L P
Sbjct: 300 KEINLTVQPE 309
>gi|115525149|ref|YP_782060.1| TonB family protein [Rhodopseudomonas palustris BisA53]
gi|115519096|gb|ABJ07080.1| TonB family protein [Rhodopseudomonas palustris BisA53]
Length = 284
Score = 50.3 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/244 (10%), Positives = 59/244 (24%), Gaps = 13/244 (5%)
Query: 11 MILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQE 70
+ LHV + + ++ + +S P +Q +
Sbjct: 34 VGLHVGAIAAALALQTPTEPAGVVLPAIMVDMAPASAAPQASPLDLAPGPEMQQADDAAP 93
Query: 71 NLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISK 130
D + + + + + ++ R P ++++K
Sbjct: 94 PPEPDQAALAPQQIEATPPQPEPVVVAPPEHKARPENKKSEQIRTDRQRRKPVKPKQVAK 153
Query: 131 ATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANW 190
EQ S +R A++ +
Sbjct: 154 LHQSEQ-------LPAPRTSAAPQAERVAPNQSAASAGARAAAVLPSYRALLTAHLQRFK 206
Query: 191 NIPSDFKRF-KKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAF 249
P+ + ++ + F +++ G VL G L V ++Q
Sbjct: 207 QYPATSRAAGEQGTAALSFTVSRSGQVLNSRLASSSG-----HHALDAETLAMVRRAQPL 261
Query: 250 RLSP 253
P
Sbjct: 262 PSFP 265
>gi|198282215|ref|YP_002218536.1| protein TolA [Acidithiobacillus ferrooxidans ATCC 53993]
gi|218665424|ref|YP_002424580.1| TolA protein [Acidithiobacillus ferrooxidans ATCC 23270]
gi|198246736|gb|ACH82329.1| protein TolA [Acidithiobacillus ferrooxidans ATCC 53993]
gi|218517637|gb|ACK78223.1| TolA protein [Acidithiobacillus ferrooxidans ATCC 23270]
Length = 317
Score = 50.3 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 21/150 (14%), Positives = 51/150 (34%), Gaps = 12/150 (8%)
Query: 125 KQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRN 184
K+++++ K + +++ +R + ++ ++++ + I ++
Sbjct: 174 KRQLARQQAKAAEAARAKALQQQMEAGAKLRAEANMAAARAQQAAENQRMLGMLINTIKT 233
Query: 185 RVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVI 244
RV W+ L + L +G +LG V G + AV
Sbjct: 234 RVSEKWSTNFSPA----LSCVLQIHLGPQGQLLGAPVVVRSSGNPGF----DRSVIAAVE 285
Query: 245 KSQAFRLSPST--YKSWRN-ITLFFVPSKM 271
+ F + P Y ++ I L +
Sbjct: 286 AAAPF-VPPIGLAYSTFNQPINLKMNAEDL 314
>gi|258543292|ref|YP_003188725.1| TonB periplasmic protein [Acetobacter pasteurianus IFO 3283-01]
gi|256634370|dbj|BAI00346.1| TonB periplasmic protein [Acetobacter pasteurianus IFO 3283-01]
gi|256637428|dbj|BAI03397.1| TonB periplasmic protein [Acetobacter pasteurianus IFO 3283-03]
gi|256640480|dbj|BAI06442.1| TonB periplasmic protein [Acetobacter pasteurianus IFO 3283-07]
gi|256643537|dbj|BAI09492.1| TonB periplasmic protein [Acetobacter pasteurianus IFO 3283-22]
gi|256646592|dbj|BAI12540.1| TonB periplasmic protein [Acetobacter pasteurianus IFO 3283-26]
gi|256649645|dbj|BAI15586.1| TonB periplasmic protein [Acetobacter pasteurianus IFO 3283-32]
gi|256652633|dbj|BAI18567.1| TonB periplasmic protein [Acetobacter pasteurianus IFO 3283-01-42C]
gi|256655689|dbj|BAI21616.1| TonB periplasmic protein [Acetobacter pasteurianus IFO 3283-12]
Length = 286
Score = 50.3 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 17/192 (8%), Positives = 45/192 (23%), Gaps = 6/192 (3%)
Query: 64 FKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPY 123
+ S+ + + + + + ++
Sbjct: 78 APEPVATPSPPTDAPPGPQQTISESDPSPVDPAKLEAPPAPVPHPPIPVPKPEKLHKIVK 137
Query: 124 DKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVR 183
+ D + + + + SS +
Sbjct: 138 KNKPTVNLKKPVPDKTPPAEKTTAPPTSKAPPAQTQAAPIEGSSSSHASQSPTTWQGALL 197
Query: 184 NRVIANWNIPSDFKRFKK-LRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKA 242
R+ P++ + +HF +++KG VL G + +L A
Sbjct: 198 ARLEQYKRYPAEAMSAHQEGTPNLHFTMDRKGRVLSAHIEKSSGHS-----LLDSEALAL 252
Query: 243 VIKSQAFRLSPS 254
V +++ P
Sbjct: 253 VRRAEPLPSPPD 264
>gi|325293022|ref|YP_004278886.1| hypothetical protein AGROH133_06478 [Agrobacterium sp. H13-3]
gi|325060875|gb|ADY64566.1| hypothetical protein AGROH133_06478 [Agrobacterium sp. H13-3]
Length = 165
Score = 49.9 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 15/92 (16%), Positives = 33/92 (35%), Gaps = 5/92 (5%)
Query: 161 LLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKI 220
+ + + + + + A W P + + L V + F L++ G + GK+
Sbjct: 48 TQALGQSRVCNDPAPVSNLKEMFDAIYACWMPP---EDTEGLVVTLQFILHKDGQIRGKV 104
Query: 221 NVDVVGG--TELVRRMLRENARKAVIKSQAFR 250
V R+ ++A AV ++
Sbjct: 105 VVTAARPQEDSPRRQAFIDSAIDAVRRATPVP 136
>gi|90022157|ref|YP_527984.1| periplasmic protein TonB links inner and outer membranes-like
protein [Saccharophagus degradans 2-40]
gi|89951757|gb|ABD81772.1| TonB-like protein [Saccharophagus degradans 2-40]
Length = 411
Score = 49.9 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 28/250 (11%), Positives = 75/250 (30%), Gaps = 16/250 (6%)
Query: 16 MFLLLLYFNFNVQLLVPISRREMLSVD------NIYNEDYHSSKYKKIEEPVVQFKGSSQ 69
F LL + + + ++ + V I + ++I K ++
Sbjct: 149 AFFDLLLRTWIGPVPLSSDFKQNMLVAGNVNSGLITRFESTRPSDERIAAVEDAVKARAK 208
Query: 70 ENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQA----LKESALLRMPVSPYDK 125
+ ++ K + ++ P K
Sbjct: 209 QAEAQEDDSTPKVAVAKTDIKPKIEAPVAIAPPPKIAAPSGALGESKTVSTPKPEPAKPK 268
Query: 126 QKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNR 185
+ + K ++ I+ +T++ ++ ++ ++ + Q IA ++
Sbjct: 269 PQEPEPAPKVEEKPKIAAITPPPPETLLDEESLEDEEDDLDFTAESLLSQQLYIAKLKRW 328
Query: 186 VIANWNIPSDF-KRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVI 244
+ PS R + V++ +++ G V ++ L + A+ AV
Sbjct: 329 SSSKLKYPSRAASRGHEGNVRLSIVIDRSGKVKKVEVIEA-----AEYSSLTKEAQNAVE 383
Query: 245 KSQAFRLSPS 254
++ F P
Sbjct: 384 RANPFPPMPE 393
>gi|316933261|ref|YP_004108243.1| TonB family protein [Rhodopseudomonas palustris DX-1]
gi|315600975|gb|ADU43510.1| TonB family protein [Rhodopseudomonas palustris DX-1]
Length = 264
Score = 49.9 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 27/244 (11%), Positives = 61/244 (25%), Gaps = 23/244 (9%)
Query: 10 SMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQ 69
++ LHV L + + V E G
Sbjct: 22 AVALHVGGAALALVSAPEDFDDDALGAPAIEV--------GVEMMSPKIEASDLPPGPDT 73
Query: 70 ENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKIS 129
E + ++ E + T ET+ + K+ +
Sbjct: 74 EASMASPALNEQKAEVHESDLPKDTPQETEEPDRVVTTETPKKVDEEQK---------EK 124
Query: 130 KATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIAN 189
++ + ++ + + + + + +
Sbjct: 125 AKQQQQASTESVAAEATAMPSNEAAKEGPRSVAPAQGVGKAAARIRATWQKELVAYLDKH 184
Query: 190 WNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAF 249
P D + K +R+ + F+L++ G VL V+ G + A + +S
Sbjct: 185 KRYPKDAAQ-KNVRIVVGFELDRVGHVLSMKIVEGSGD-----PAFDQAALDMIKRSDPV 238
Query: 250 RLSP 253
P
Sbjct: 239 PAPP 242
>gi|94971581|ref|YP_593629.1| TonB-like protein [Candidatus Koribacter versatilis Ellin345]
gi|94553631|gb|ABF43555.1| TonB-like protein [Candidatus Koribacter versatilis Ellin345]
Length = 369
Score = 49.9 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 38/303 (12%), Positives = 77/303 (25%), Gaps = 53/303 (17%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPV 61
RL IS+I H++ ++ L + + +++ D + ++D + +
Sbjct: 52 RLREAAWISIIAHLVAIIFLSLSPKWMPNLWGHPVKVVE-DRLRDKDTTFLALPPDAQKL 110
Query: 62 VQFK-----GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALL 116
VQ + + DQ + + + S Q ++
Sbjct: 111 VQKPHTNVLSDKDRVATSHNPDPKELKKLLDQRQPGPPAHPAAQPSVPAPPQMAQQQQQS 170
Query: 117 RMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQ 176
+P +Q A N + + K ++ + + R S
Sbjct: 171 PQQQNPATQQGQQTAMNNPPQFESPNMQPKMTLPKAQPSFGAVAMSAGSAIQQAARASSG 230
Query: 177 --------------------------------------DAIAIVRNRVIANWNIPSDF-- 196
+A ++ + ANW
Sbjct: 231 SAGKLAVGGGMGLGRGPTGGQVRDAMEITTDTQGVDFGPYLARIKQTIEANWYTAMPESV 290
Query: 197 --KRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPS 254
K +V + F + G V G G L A + S F P
Sbjct: 291 YPPLRKSGKVAVEFVILPDGKVQGMRIFFPSGDV-----ALDRAAWGGISASNPFPPLPK 345
Query: 255 TYK 257
+
Sbjct: 346 EFH 348
>gi|318603885|emb|CBY25383.1| putative TonB protein [Yersinia enterocolitica subsp. palearctica
Y11]
Length = 227
Score = 49.9 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 23/186 (12%), Positives = 52/186 (27%), Gaps = 9/186 (4%)
Query: 71 NLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISK 130
V + S + + Q A +Q I++
Sbjct: 28 EPVTELSEHQPEVVSHILAAPEHSNAALIVEREVNEPQKELNKAKRPQQKVMTPRQPINE 87
Query: 131 ATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANW 190
T + Q + + + + S + + + ++ +
Sbjct: 88 RTPENQSNPSAPAVVTST---PLSGESHRVAAAANSHSLHNQQSKMNWKSRLQGHLAGFK 144
Query: 191 NIPSDFK-RFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAF 249
P + + ++ V + F +N++G VL V G L + A V ++Q
Sbjct: 145 RYPPRARKQRQQGTVIIRFVVNKEGDVLSTKLVKSSG-----VIALDQEALAVVKRAQPL 199
Query: 250 RLSPST 255
P+
Sbjct: 200 PQPPAG 205
>gi|300309634|ref|YP_003773726.1| TonB domain-containing protein [Herbaspirillum seropedicae SmR1]
gi|300072419|gb|ADJ61818.1| TonB domain protein [Herbaspirillum seropedicae SmR1]
Length = 236
Score = 49.9 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 25/214 (11%), Positives = 56/214 (26%), Gaps = 8/214 (3%)
Query: 47 EDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKG 106
E + + ++ L R Q + + + + K
Sbjct: 12 EPLATLPSLVVLAVLIIAGVQKATELKRKEDPQPVQIALMELPPPPPPQPKPQVEPPPKP 71
Query: 107 EQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVE 166
+ K+ R P ++ + +
Sbjct: 72 VEPPKKQEAPRPVAKPAPVKQTPAPVDPAPPSANAPVVPAPPSTPAAPPVQAAPVAPPAP 131
Query: 167 KSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFK---KLRVKMHFQLNQKGFVLGKINVD 223
Q + +R + + P+ + + +V++ F L + G V VD
Sbjct: 132 PPVNTANIEQTYVGQLRAHLNSIKRYPTGREASTLRPQGKVRVWFVLRRDGSV-----VD 186
Query: 224 VVGGTELVRRMLRENARKAVIKSQAFRLSPSTYK 257
+ +L + ARK + ++ TYK
Sbjct: 187 SGIESSSNSMLLDDAARKTINRAAFAPFPDDTYK 220
>gi|114047933|ref|YP_738483.1| TolA family protein [Shewanella sp. MR-7]
gi|113889375|gb|ABI43426.1| TolA family protein [Shewanella sp. MR-7]
Length = 340
Score = 49.9 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 24/223 (10%), Positives = 71/223 (31%), Gaps = 12/223 (5%)
Query: 49 YHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQ 108
+ +K ++ K QE + + + Q+ ++ + A ++ ++ +
Sbjct: 126 KQQQEKEKAQKAEADRKQKEQERKLAEDAAQKAAEKRKVEEAAAAKAEADRKQKEAEAKA 185
Query: 109 ALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKS 168
+ A + + + + A + + ++ +
Sbjct: 186 KAEADAKAKAEAKAKADAEAKAKAAAKAKADAEAKARAQQEQEMADALAAEQAALSQTMN 245
Query: 169 SRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGT 228
+ + A++++ + N + + + +L GFV+ T
Sbjct: 246 KQMQTEVGKYTAMIKSTIQRNLVVDESMRGK---TCTVSVRLANDGFVI-------SSQT 295
Query: 229 ELVRRMLRENARKAVIKSQAFRLSPST--YKSWRNITLFFVPS 269
+ + A+ A++K+ +SP Y + I L P+
Sbjct: 296 QGGDPNVCRAAKAAILKAGKLPVSPDPAVYNLMKEINLIVEPT 338
>gi|117920973|ref|YP_870165.1| TolA family protein [Shewanella sp. ANA-3]
gi|117613305|gb|ABK48759.1| TolA family protein [Shewanella sp. ANA-3]
Length = 340
Score = 49.9 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 24/223 (10%), Positives = 71/223 (31%), Gaps = 12/223 (5%)
Query: 49 YHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQ 108
+ +K ++ K QE + + + Q+ ++ + A ++ ++ +
Sbjct: 126 KQQQEKEKAQKAEADRKQKEQERKLAEDAAQKAAEKRKVEEAAAAKAEADRKQKEAEAKA 185
Query: 109 ALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKS 168
+ A + + + + A + + ++ +
Sbjct: 186 KAEADAKAKAEAKAKADAEAKAKAEAKAKADAEAKARAQQEQEMADALAAEQAALSQTMN 245
Query: 169 SRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGT 228
+ + A++++ + N + + + +L GFV+ T
Sbjct: 246 KQMQTEVGKYTAMIKSTIQRNLVVDESMRGK---TCTVSVRLANDGFVI-------SSQT 295
Query: 229 ELVRRMLRENARKAVIKSQAFRLSPST--YKSWRNITLFFVPS 269
+ + A+ A++K+ +SP Y + I L P+
Sbjct: 296 QGGDPNVCRAAKAAILKAGKLPVSPDPAVYNLMKEINLIVEPT 338
>gi|320539140|ref|ZP_08038811.1| membrane anchored protein in TolA-TolQ-TolR complex [Serratia
symbiotica str. Tucson]
gi|320030778|gb|EFW12786.1| membrane anchored protein in TolA-TolQ-TolR complex [Serratia
symbiotica str. Tucson]
Length = 355
Score = 49.9 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 27/185 (14%), Positives = 60/185 (32%), Gaps = 12/185 (6%)
Query: 87 DQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEK 146
D+ E + K + + E+A + + ++ + G+S +
Sbjct: 181 DKLALAQAEAQKKAEARKRAEEAKNAAEQKAAAQAKKKAAAAKQSAEVDDLFDGLSDGKN 240
Query: 147 KSIDTVVVRPDKKELLSKVEKSSRKRIPS-QDAIAIVRNRVIANWNIPSDFKRFKKLRVK 205
+ + D K K++ + ++ + + + P F
Sbjct: 241 APEEGGKQKGDGKPAGQGNAKAAGASGADINGYMGQIQGAIQSKFYDPGSFTGK---TCD 297
Query: 206 MHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQ-AFRLSPSTYKSWRNITL 264
+ +L G ++ V G + L + A A +Q S + Y+ ++N TL
Sbjct: 298 LRIKLAPDGLLISVQEV----GGDP---ALCQAAVSAAKLAQMPKPPSDAVYQHFKNFTL 350
Query: 265 FFVPS 269
F P
Sbjct: 351 GFKPQ 355
>gi|302338256|ref|YP_003803462.1| TonB family protein [Spirochaeta smaragdinae DSM 11293]
gi|301635441|gb|ADK80868.1| TonB family protein [Spirochaeta smaragdinae DSM 11293]
Length = 256
Score = 49.9 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 22/213 (10%), Positives = 60/213 (28%), Gaps = 8/213 (3%)
Query: 42 DNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRS 101
D + ++ + V + + + + +
Sbjct: 32 DIVPTRVEKAADVFSLSFDAVDEVEEPSIPAPAASQPELQPTVPAAAIISEEEPLPSMKR 91
Query: 102 SSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKEL 161
S + P Q + T ++ A + + +
Sbjct: 92 EESASLSPAPQKTGTTQEAEPGLLQAAAAPTGVSTPIETGERAVETATERPDRVA--SGS 149
Query: 162 LSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKI 220
S+ +++ +R + + +V NR+ A P ++ + + V ++F + G +
Sbjct: 150 QSEDDENRSERPSTVEYRRLVLNRLEACKIYPLAARKRELEGDVTLYFTIQPDGSI--GE 207
Query: 221 NVDVVGGTELVRRMLRENARKAVIKSQAFRLSP 253
+ A K+V +++ F P
Sbjct: 208 LLLKDSTAHKFLIAA---AMKSVHQAEPFPAPP 237
>gi|116750168|ref|YP_846855.1| TonB family protein [Syntrophobacter fumaroxidans MPOB]
gi|116699232|gb|ABK18420.1| TonB family protein [Syntrophobacter fumaroxidans MPOB]
Length = 301
Score = 49.9 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 28/281 (9%), Positives = 64/281 (22%), Gaps = 45/281 (16%)
Query: 1 MRLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHS--------- 51
MR+ L S++ H L L F+ L VD + + +
Sbjct: 1 MRIWPNLLFSILFHAALLGWLAFSPPFLRPE---TERCLIVDLVALDADPARGGTPGGGK 57
Query: 52 --------------------SKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKT 91
+ G + + + S T
Sbjct: 58 DVILAAHEPKADMMAEHSLDMSAASAAKDSGTEHGPNPGGTEPPARIGPSQAASSVSTPK 117
Query: 92 HATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDT 151
+ + +R+ K + P + + T + + ++
Sbjct: 118 PTKKADARRNDREKHRWSHARRHAATRSTEPEGTGERAPGTERGASASRETGHGERPRGN 177
Query: 152 VVVRPDKKELLS------KVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVK 205
S + +V+ + + + V
Sbjct: 178 AGGGHGDDAGSSGVGAGNSSSEGPIDAPLGSANGPRFVTKVMPKYPHRARELGMEG-TVV 236
Query: 206 MHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKS 246
+ ++ +G + +V G E A +A+ S
Sbjct: 237 LRVTIDTRGMPVRVESVRKAGFG------FEEEAIRAIRSS 271
>gi|21466140|pdb|1LR0|A Chain A, Pseudomonas Aeruginosa Tola Domain Iii, Seleno-Methionine
Derivative
Length = 129
Score = 49.9 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 16/127 (12%), Positives = 33/127 (25%), Gaps = 12/127 (9%)
Query: 150 DTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQ 209
+ + + ++ N V W P + V++ +
Sbjct: 2 RALAELLSDTTERQQALADEVGSEVTGSLDDLIVNLVSQQWRRPPSAR--NGXSVEVLIE 59
Query: 210 LNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFR----LSPSTYKS-WRNITL 264
G + G + +A AV L +T+ S +R +
Sbjct: 60 XLPDGTITNASVSRSSGD-----KPFDSSAVAAVRNVGRIPEXQQLPRATFDSLYRQRRI 114
Query: 265 FFVPSKM 271
F P +
Sbjct: 115 IFKPEDL 121
>gi|254283725|ref|ZP_04958693.1| TonB protein, C-terminal domain [gamma proteobacterium NOR51-B]
gi|219679928|gb|EED36277.1| TonB protein, C-terminal domain [gamma proteobacterium NOR51-B]
Length = 245
Score = 49.9 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 16/113 (14%), Positives = 40/113 (35%), Gaps = 6/113 (5%)
Query: 134 KEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIP 193
+ ++ + + + +++ + + +R D +A R RV N
Sbjct: 103 PTSADALRAQIDELEREVMALSDANTPSKARIGQVAARRALDADYLARWRARVERVGNTL 162
Query: 194 SDFKRFK-KLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIK 245
+R++ V++ + G +LG + G + L A + V +
Sbjct: 163 YGGERYRTNGDVRLLVTVAANGTLLGIRILASSGNGD-----LDRAAIQTVQQ 210
>gi|323140573|ref|ZP_08075498.1| TonB-dependent receptor [Phascolarctobacterium sp. YIT 12067]
gi|322414926|gb|EFY05720.1| TonB-dependent receptor [Phascolarctobacterium sp. YIT 12067]
Length = 251
Score = 49.9 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 28/248 (11%), Positives = 62/248 (25%), Gaps = 33/248 (13%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEE-P 60
R G S++ H+ LL + F L P +++ V IE+
Sbjct: 6 RSRIGFIGSIVTHIFILLFVSFVGLFNLSHP-PANDIVEVSLFGGGGGGGGNDADIEDSN 64
Query: 61 VVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPV 120
+ S++E++ + + +D+ K ++ ++ + +
Sbjct: 65 ANDEENSTEEDVQEEPTPDPEAIWKNDENKPQPVHKKSAVKKVARKGSGTGQGSGH---- 120
Query: 121 SPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIA 180
G + + S S +A
Sbjct: 121 -------------------GSGVGPGTGSGSGGGNGSGHGTGNGSGTGSGSGGGSGNASV 161
Query: 181 IVRNRVIANWNIPSDFKRFKKLRV---KMHFQLNQKGFVLGKINVDVVGGTELVRRMLRE 237
+ R++ + + +N G V V G + +
Sbjct: 162 AIMPRIVRKIDPVYPAAERNAGITGSGVVRLLVNTNGTVDEVTLVSSSGNAN-----IDQ 216
Query: 238 NARKAVIK 245
A K
Sbjct: 217 AGINAAYK 224
>gi|118589609|ref|ZP_01547014.1| hypothetical protein SIAM614_04195 [Stappia aggregata IAM 12614]
gi|118437695|gb|EAV44331.1| hypothetical protein SIAM614_04195 [Stappia aggregata IAM 12614]
Length = 359
Score = 49.9 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 24/247 (9%), Positives = 61/247 (24%), Gaps = 24/247 (9%)
Query: 8 AISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGS 67
+S+ V ++ + V+ + + P+ K
Sbjct: 118 VLSVPATAGITSTELVTAPVTTQSRVTPEPVKPVEPAPQQKPVELARVEPAAPMETVKPV 177
Query: 68 SQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQK 127
E V+ + T+ + + K+ + + + +K
Sbjct: 178 ELEAEVQQPIADPLAEVIQTPTRKPEPPVRKAEAPRVDERETPKKVEKTQTRGAETNARK 237
Query: 128 ISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVI 187
+ + + + + + V ++
Sbjct: 238 GGERITSKSA------------------KSNVNGRANARTNDGGTKATSNYQGKVVAKLR 279
Query: 188 ANWNIPSDFKRFKKL-RVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKS 246
P + KR + + V + F ++ G V G G +L + A V ++
Sbjct: 280 RAKRYPREAKRQRLVGTVNVGFTISSNGAVSGIRITRSSG-----HPVLDQAALDMVRRA 334
Query: 247 QAFRLSP 253
P
Sbjct: 335 APMPKFP 341
>gi|126668448|ref|ZP_01739404.1| possible energy transducer TonB, C-terminal region [Marinobacter
sp. ELB17]
gi|126627065|gb|EAZ97706.1| possible energy transducer TonB, C-terminal region [Marinobacter
sp. ELB17]
Length = 236
Score = 49.9 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 20/220 (9%), Positives = 57/220 (25%), Gaps = 20/220 (9%)
Query: 38 MLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENE 97
+L + + + K + + + + + E
Sbjct: 20 ILLIALSTVQPQVTIPEGKDPANQTRSIRITLADQAPEPESAAQPAGVPAPRPEPKKQPE 79
Query: 98 TKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPD 157
+ + E P K + K++ +
Sbjct: 80 PSPKEPAPKFDPMPEPEPAESASKPVAK--------------TNTKPAGKTVARQSEKTA 125
Query: 158 KKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFK-KLRVKMHFQLNQKGFV 216
K +K + + + + ++ + + A + P +R + + F+ ++ G +
Sbjct: 126 KSAEPTKKQLRAGASQKTDNYLSKLVRHLSAYRDYPRRARRLGLQGTPLVVFEFDRAGRL 185
Query: 217 LGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPSTY 256
L + R+L + A + + F P
Sbjct: 186 LNYRLLQGSS-----HRILDDAALNMLKLASPFPPVPDDM 220
>gi|299067720|emb|CBJ38929.1| protein tolA, inner membrane/periplasmic component of the tol-pal
system [Ralstonia solanacearum CMR15]
Length = 346
Score = 49.5 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 23/206 (11%), Positives = 55/206 (26%), Gaps = 8/206 (3%)
Query: 46 NEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSK 105
++ + + +++E + + ++ Q + A + ++
Sbjct: 128 LKEQKAQQARQVELQKRALAEQLAQQAKERQAREKAAAEAQAQARKDAQLKAQAEAKAAA 187
Query: 106 GEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKK-SIDTVVVRPDKKELLSK 164
QA +++ + D ++ + Q + +
Sbjct: 188 EAQAKQKAKAAAEAKAKADAEQRAAQAKSNAQRQARLRDLQALAGTAGATGAAAGSGGGV 247
Query: 165 VEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDV 224
+ S VR +V N N D V + Q+ G VL +
Sbjct: 248 GSGTGAGGTASAGYADRVRAKVQPNINFYDDTSG--NPIVTVLVQMAPDGTVLSRRVTKQ 305
Query: 225 VGGTELVRRMLRENARKAVIKSQAFR 250
G L + +A+ S
Sbjct: 306 SG-----YPALDDAVLRAIDLSSPLP 326
>gi|325923402|ref|ZP_08185067.1| Cell division and transport-associated protein TolA (TC 2.C.1.2.1)
[Xanthomonas gardneri ATCC 19865]
gi|325546117|gb|EGD17306.1| Cell division and transport-associated protein TolA (TC 2.C.1.2.1)
[Xanthomonas gardneri ATCC 19865]
Length = 346
Score = 49.5 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 25/240 (10%), Positives = 64/240 (26%), Gaps = 8/240 (3%)
Query: 33 ISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSV--QENGDRFSDQTK 90
+ ++ + + + D + + QE R + E + + K
Sbjct: 112 PTPQQAQAQERVAQPDKVDQERVDALALSAEKAKQEQEAKRRQEQIDLTERKRQEEAEQK 171
Query: 91 THATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSID 150
+ + + + K A + R +++ +AT + + +
Sbjct: 172 LRLAKQQEEADAKKKQAAAQQAEDAERQKKIADIRRQREQATKEAALAEQKLRQVAAARA 231
Query: 151 TVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQL 210
+ S A ++ +V+ W P + + ++ +
Sbjct: 232 QQASSAAAATAQPTAGQGGTNTDLSAKYAAAIQQKVLGQWVRPPSVPPGQ--KCTINIRQ 289
Query: 211 NQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPSTYKSWRNITLFFVPSK 270
G V+ + + AV+ +Q RN+T F
Sbjct: 290 LPGGQVMEAKVA----PGCPYDEAGQRSIEAAVLSAQPLPYRGYESVFQRNLTFVFTAQD 345
>gi|89901450|ref|YP_523921.1| TonB-like protein [Rhodoferax ferrireducens T118]
gi|89346187|gb|ABD70390.1| TonB-like [Rhodoferax ferrireducens T118]
Length = 317
Score = 49.5 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 17/199 (8%), Positives = 55/199 (27%), Gaps = 7/199 (3%)
Query: 52 SKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALK 111
E + + K + + R + + + + ++
Sbjct: 107 PNIALEREKLREKKELELKKQQALDKQRLEKQRLDQLKREELKQEKLQLEKKRLQDKRES 166
Query: 112 ESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRK 171
+ + + + ++D + ++ K +I+ + + +
Sbjct: 167 DKKAAEDKKKAAQEAQRKETIQAQEDARKLAAQRKANIERMTGLAGASGGPTARGTQLQS 226
Query: 172 RIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELV 231
PS +R R+ N D ++ + + G ++ + G
Sbjct: 227 SGPSASYAGRIRARIKPNIVFADDIGG--NPAAEVEVRTSPDGTIISRKLTKSSG----- 279
Query: 232 RRMLRENARKAVIKSQAFR 250
+ E +A+ K++
Sbjct: 280 VKSWDEAVLRAIDKTEVLP 298
>gi|290477348|ref|YP_003470269.1| TonB protein [Xenorhabdus bovienii SS-2004]
gi|289176702|emb|CBJ83511.1| TonB protein [Xenorhabdus bovienii SS-2004]
Length = 207
Score = 49.5 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 20/192 (10%), Positives = 55/192 (28%), Gaps = 9/192 (4%)
Query: 77 SVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQ 136
+ E+ + + ++ P +K+ ++
Sbjct: 22 TAPESPTKPEIALDKAVQPENRLEKPLESVKPQKRQKQQKEKPQEKVEKKSAPSPQVQKD 81
Query: 137 DLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDF 196
+ + E D + + + + + + ++ V ++ P
Sbjct: 82 NNEEF---ETSGTDQINAQSSMSRAATTQPLVGQGNSALDNYQSRLKQEVESHKRYPRKA 138
Query: 197 KRFKK-LRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPST 255
KR K+ V + F L G ++ G + +L + A A+ ++ + P
Sbjct: 139 KRMKQQGTVTIGFTLLNDGSFTAARVINSSGNS-----VLDDAALDAIARASSVGPKPVD 193
Query: 256 YKSWRNITLFFV 267
+ + F
Sbjct: 194 MAPDVTLKIDFE 205
>gi|332159753|ref|YP_004296330.1| hypothetical protein YE105_C0129 [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|325663983|gb|ADZ40627.1| hypothetical protein YE105_C0129 [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
Length = 214
Score = 49.5 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 23/186 (12%), Positives = 52/186 (27%), Gaps = 9/186 (4%)
Query: 71 NLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISK 130
V + S + + Q A +Q I++
Sbjct: 15 EPVTELSEHQPEVVSHILAAPEHSNAALIVEREVNEPQKELNKAKRPQQKVMTPRQPINE 74
Query: 131 ATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANW 190
T + Q + + + + S + + + ++ +
Sbjct: 75 RTPENQSNPSAPAVVTST---PLSGESHRVAAAANSHSLHNQQSKMNWKSRLQGHLAGFK 131
Query: 191 NIPSDFK-RFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAF 249
P + + ++ V + F +N++G VL V G L + A V ++Q
Sbjct: 132 RYPPRARKQRQQGTVIIRFVVNKEGDVLSTKLVKSSG-----VIALDQEALAVVKRAQPL 186
Query: 250 RLSPST 255
P+
Sbjct: 187 PQPPAG 192
>gi|262198297|ref|YP_003269506.1| TonB family protein [Haliangium ochraceum DSM 14365]
gi|262081644|gb|ACY17613.1| TonB family protein [Haliangium ochraceum DSM 14365]
Length = 263
Score = 49.5 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 14/199 (7%), Positives = 42/199 (21%), Gaps = 5/199 (2%)
Query: 56 KIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESAL 115
+ E + + R+ + + +A+
Sbjct: 46 ATPPAQPALVAGASEPAAPQQTTTTEASSTEVPPPPAPARSAAARAVPAHPSASAAAAAV 105
Query: 116 LRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPS 175
+ ++ + + + R
Sbjct: 106 ASNSDTRPPALEMPLEAEAPPGAATNATRRVPNSAPLAAALLAGTQAPPPAPPPRASFDR 165
Query: 176 QDAIAIVRNRVIANWNIPSDFKRF-KKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRM 234
+R R+ A+ P +R + + ++ G +L + G+
Sbjct: 166 GAYADALRARIAAHKRYPPRARRRGDQGEAVVALRIASDGHLLAAPRLLRSSGSA----A 221
Query: 235 LRENARKAVIKSQAFRLSP 253
L A + + +
Sbjct: 222 LDREALRMAQAAAPYPRPA 240
>gi|265987242|ref|ZP_06099799.1| TonB [Brucella pinnipedialis M292/94/1]
gi|264659439|gb|EEZ29700.1| TonB [Brucella pinnipedialis M292/94/1]
Length = 270
Score = 49.5 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 21/211 (9%), Positives = 51/211 (24%), Gaps = 1/211 (0%)
Query: 18 LLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFS 77
+ + L+ P R V + + E + + +
Sbjct: 24 VAAMVVELVPDLVAPAEERVSEEVQPETTTEQPEEVQPEPEPEPQPEAKAEPQQVQEPEE 83
Query: 78 VQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQD 137
V + E + + +A + ++ K K K K+ +
Sbjct: 84 VIPDVVEAQKPEVAVPLPVEKPQEKPEEKPKAEPKPEPKKVEKLKPQKPKPEKVKPKKAE 143
Query: 138 LQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFK 197
+ + E S+ + + +++ + N
Sbjct: 144 KAAETREASAPRVDADNGAKVAA-SKRGETSASAGVIWAKWTSRLQSHMARNARFLQGKS 202
Query: 198 RFKKLRVKMHFQLNQKGFVLGKINVDVVGGT 228
R + + F ++ G VL G
Sbjct: 203 RNTRGEAHVAFVIDPSGNVLSARIAVSSGDP 233
>gi|325299881|ref|YP_004259798.1| TonB family protein [Bacteroides salanitronis DSM 18170]
gi|324319434|gb|ADY37325.1| TonB family protein [Bacteroides salanitronis DSM 18170]
Length = 275
Score = 49.5 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 23/234 (9%), Positives = 57/234 (24%), Gaps = 8/234 (3%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
G+ +++LHV L+ L+ V + + + + Y E ++
Sbjct: 8 GIIGTVVLHVAVLVFLFLYVLVLPAKQEEGGVPVMLGDNATGQGDADPYTLTEVDLLPQP 67
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
+S+ ++ +E + + E R + E +E +
Sbjct: 68 EASEPDVPAPDGGEEQPLITQADEPSLQVKKEEPRKEQKREEAVKEEKTAEHPKPREKTE 127
Query: 126 QKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDA------- 178
+ + S + K + S A
Sbjct: 128 AEKRAEAERAAAQTASSKIAGAFGKGAKMGSTGKSEGEGNQGSPTGNGSEGKASGVGASG 187
Query: 179 -IAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELV 231
+ + + + RV + ++ G V+
Sbjct: 188 VFDLNGRSLGPGGLPLPVYNVQDEGRVVVTIVVDPSGRVISTQINKRTNTVNPA 241
>gi|13774063|gb|AAG23396.1| TonB [Plesiomonas shigelloides]
Length = 288
Score = 49.5 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 31/256 (12%), Positives = 67/256 (26%), Gaps = 16/256 (6%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
L +GL +S ++ L L +S L ++ V
Sbjct: 20 LASGLCMSAHAALLLFGLQPTQTRAVTLDSLSAGPALVLNLTATGAQSGVNTNAAAAADV 79
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
Q E V+ + + + K++ ++ + ++P
Sbjct: 80 QPAPQKTE---PKKVVEPSAVPAKAAETAKTQQAKPKQAKPVLKKEPAPKKVAPKIPEEK 136
Query: 123 YDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIV 182
K+ + K K D + + ++
Sbjct: 137 APKKTVKKTERKSTDNTEQHNPVTANTGKTAAHSSATTQSASGASNTASHAAPASTAQAS 196
Query: 183 RNRVIANWNIPSDFK--------RFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRM 234
+ + +P R ++ V + +L +G L + + G +
Sbjct: 197 GSSSEPRFRVPPSAPEYPKASRMRRQEGTVLLEVKLGTQGEQLQVVLLKSSG-----FPL 251
Query: 235 LRENARKAVIKSQAFR 250
L +A KAV Q
Sbjct: 252 LDRSALKAVKGWQFLP 267
>gi|297170923|gb|ADI21940.1| uncharacterized low-complexity proteins [uncultured nuHF2 cluster
bacterium HF0130_29D04]
Length = 695
Score = 49.5 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 20/146 (13%), Positives = 47/146 (32%), Gaps = 6/146 (4%)
Query: 129 SKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIA 188
+ + I+ + D + K K + A+ +++ +
Sbjct: 199 PEDIKIAKASGAINVPKLVVTDKTLESILKNLSSPIPGKKRGSPQERRAAVNVIKMAITP 258
Query: 189 NWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKA-VI--K 245
W P+ + + + +L+ G V + ++ V+
Sbjct: 259 CWYQPAFVENVEVVVRV---KLSPDGRVKKAWVANNSALLNNSYKIAAAATALRAVLNPA 315
Query: 246 SQAFRLSPSTYKSWRNITLFFVPSKM 271
Q F+L P Y W +++L F +K+
Sbjct: 316 CQPFKLDPKKYYIWEDVSLSFNSNKL 341
>gi|262196483|ref|YP_003267692.1| TonB family protein [Haliangium ochraceum DSM 14365]
gi|262079830|gb|ACY15799.1| TonB family protein [Haliangium ochraceum DSM 14365]
Length = 470
Score = 49.1 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 31/248 (12%), Positives = 57/248 (22%), Gaps = 20/248 (8%)
Query: 34 SRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHA 93
+ D I + + + +R V + + A
Sbjct: 216 PQPSPEQPDEIP-QPKREAPLDDKAGANADAPEGPGQLAMRALGVPTPSREAREAVEAGA 274
Query: 94 TENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVV 153
+ S E D ++ ++ ++ VV
Sbjct: 275 LDGSDAPVSERGLETRRGAGERYEAARERLDPRRGEGGGGGGGRNLPNLRPSEELLERVV 334
Query: 154 VRPDKKELLSKVEKSSRKRIPSQ----DAIAIVRNRVIANWNIPS---------DFKRFK 200
L + E S Q + +V NWN + K
Sbjct: 335 GGGSVDHLDNVAEGDSTALNARQWKFASFFNRSKRQVAQNWNPNRVIAATDPKGNVLGVK 394
Query: 201 KLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPSTY-KSW 259
+ L+ G + I + G L A +A +Q F P +
Sbjct: 395 DRVTVLRITLDPSGALKDAIVLRSSGA-----EFLDAEAVRAFRAAQPFPNPPPGLVDAS 449
Query: 260 RNITLFFV 267
I+ F
Sbjct: 450 GEISFTFN 457
>gi|152985158|ref|YP_001349886.1| TolA protein [Pseudomonas aeruginosa PA7]
gi|150960316|gb|ABR82341.1| protein TolA [Pseudomonas aeruginosa PA7]
Length = 345
Score = 49.1 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 16/127 (12%), Positives = 35/127 (27%), Gaps = 12/127 (9%)
Query: 150 DTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQ 209
+ + + ++ N V W P + + V++ +
Sbjct: 224 QALAELLSDTTERQQALADEVGSEVTGSLDDLIVNLVSQQWRRPPSAR--NGMSVEVLIE 281
Query: 210 LNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFR----LSPSTYKS-WRNITL 264
+ G + G + +A AV L +T+ S +R +
Sbjct: 282 MLPDGTITNASVSRSSGD-----KPFDSSAVAAVRNVGRIPEMQQLPRATFDSLYRQRRI 336
Query: 265 FFVPSKM 271
F P +
Sbjct: 337 IFKPEDL 343
>gi|300022073|ref|YP_003754684.1| TonB family protein [Hyphomicrobium denitrificans ATCC 51888]
gi|299523894|gb|ADJ22363.1| TonB family protein [Hyphomicrobium denitrificans ATCC 51888]
Length = 374
Score = 49.1 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 24/255 (9%), Positives = 62/255 (24%), Gaps = 31/255 (12%)
Query: 5 NGLAISMILHVMFLLLLYFNFN----------------VQLLVPISRREMLSVDNIYNED 48
+ + IS+ LH + F+++ E + +++
Sbjct: 85 SAIVISICLHTA-IASTMFDWSGSDDTFGTLSDKTDAISLATEQTVVLESIETEHVQTAS 143
Query: 49 YHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSS------ 102
S++ + + + E D + +
Sbjct: 144 AASAESQAGSVQAAESAPQPLTEVKEAVEATEPPPESVDVAEVAPSAALPTDDPLHVIRG 203
Query: 103 -SSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKEL 161
+ E ++ + +I E+D + K+ T
Sbjct: 204 QAPPDEVHETKAIQTSETIEEVKPAEIESKEVAEEDSKKEDAERKERQVTAQSASRASTA 263
Query: 162 LSKVEKSSRKRIPSQDAIAIVR-------NRVIANWNIPSDFKRFKKLRVKMHFQLNQKG 214
S ++S + + ++ R R+ A + ++ F L G
Sbjct: 264 GSTTSRASMAQSEASGKVSASRGSILNYAARIRAILSRNKPSGDGYTGTTRISFGLTPSG 323
Query: 215 FVLGKINVDVVGGTE 229
+ G +
Sbjct: 324 EIRYAEIATSSGKGK 338
>gi|332559390|ref|ZP_08413712.1| putative TonB protein [Rhodobacter sphaeroides WS8N]
gi|332277102|gb|EGJ22417.1| putative TonB protein [Rhodobacter sphaeroides WS8N]
Length = 294
Score = 49.1 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 23/207 (11%), Positives = 52/207 (25%), Gaps = 10/207 (4%)
Query: 48 DYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGE 107
+ E + + + E D D + E
Sbjct: 81 PQVEAPVAPEPEQIAEPEPELAPPPPDVRPPAETVD-LPDIPVPTSETFAYDPPPPPPPE 139
Query: 108 QALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEK 167
+ P ++ + + + A + V
Sbjct: 140 EEEVAEIPPDARPMPRPERTPPPEKKPDPPKREVKKAAAPPPQQAAAPTRSTGSAAAVAS 199
Query: 168 SSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGG 227
+ + + A +R R+ + R + V + ++Q G + G V G
Sbjct: 200 RGQVQNLTAKWGAEIRKRIQR----HTRGARGQAGEVTVRLTVSQGGALGGATVVRSSGN 255
Query: 228 TELVRRMLRENARKAVIKSQAFRLSPS 254
+ + A +AV + F +P+
Sbjct: 256 PR-----IDQLALRAVQSAGRFPAAPA 277
>gi|313683594|ref|YP_004061332.1| tonb family protein [Sulfuricurvum kujiense DSM 16994]
gi|313156454|gb|ADR35132.1| TonB family protein [Sulfuricurvum kujiense DSM 16994]
Length = 233
Score = 49.1 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 30/252 (11%), Positives = 64/252 (25%), Gaps = 43/252 (17%)
Query: 4 ENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQ 63
+S++ H + L +F P M+ + + S I +
Sbjct: 5 RKSFLLSLVFHTLMGSLAFFVLIQMRTPP----PMVKIPLQHITLVSLSDSAPIPK---- 56
Query: 64 FKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPY 123
E +V T + + S + + A ++ VS
Sbjct: 57 -----TEKIVSPKPDITPPMPIKPLTSQPTPSAKAQNSKPTPIQTAPSQTLSPVQTVSAP 111
Query: 124 DKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVR 183
+ S + K I + A +R
Sbjct: 112 PSSQPSVQNAPAAEAVQSPAKPKIDI----------------------AAEKRAFFASLR 149
Query: 184 NRVIANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKA 242
+ + + PS +R + V + F L+ G + + +A+ A
Sbjct: 150 STIQNHLRYPSAARRRGMEGEVGVRFSLSNNGTINAISIRHGA-------EIFHNSAKTA 202
Query: 243 VIKSQAFRLSPS 254
V + + +
Sbjct: 203 VASASGINVPKN 214
>gi|15888947|ref|NP_354628.1| hypothetical protein Atu1636 [Agrobacterium tumefaciens str. C58]
gi|15156726|gb|AAK87413.1| conserved hypothetical protein [Agrobacterium tumefaciens str. C58]
Length = 145
Score = 49.1 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 17/87 (19%), Positives = 34/87 (39%), Gaps = 5/87 (5%)
Query: 164 KVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVD 223
+ + + + + + A W P + + L V + F L++ G + GK+ V
Sbjct: 31 SAQSRICRDPTPARNLNEMFDAIYACWVPP---EDTEGLVVTLRFILHKDGQIRGKVVVI 87
Query: 224 VVGGTE--LVRRMLRENARKAVIKSQA 248
E R+ E+A AV ++
Sbjct: 88 AARPQEESPRRQAFIESAINAVKQAAP 114
>gi|218128539|ref|ZP_03457343.1| hypothetical protein BACEGG_00109 [Bacteroides eggerthii DSM 20697]
gi|317475645|ref|ZP_07934906.1| TonB family domain-containing protein [Bacteroides eggerthii
1_2_48FAA]
gi|217989263|gb|EEC55577.1| hypothetical protein BACEGG_00109 [Bacteroides eggerthii DSM 20697]
gi|316908215|gb|EFV29908.1| TonB family domain-containing protein [Bacteroides eggerthii
1_2_48FAA]
Length = 270
Score = 49.1 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 28/229 (12%), Positives = 64/229 (27%), Gaps = 2/229 (0%)
Query: 6 GLAISMILHVMFLLLLYF-NFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQF 64
GLA ++++HV+ + LL F + ++ + +++ +
Sbjct: 11 GLAGALLVHVVVIALLILVGFTLPEQSEEGGVPVMMGEVPDAWGAADPSLVEVDVMPEET 70
Query: 65 KGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYD 124
E + +D QE + + + K + E K+ + E+A + L
Sbjct: 71 APEMPEEVEQDMLTQEEEETVAIKPKAEEKKKEAKKPEKTAAEKAEEARKLAAEKAERER 130
Query: 125 KQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRN 184
K A + G T + ++ R+
Sbjct: 131 KAAEEAARKRVAGAFGKGAQMGSKGTTEGEGVQGSPTGNSSSGATAGTGGYGTFNLGGRS 190
Query: 185 RVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRR 233
+ + + +V + +N G V+ R
Sbjct: 191 -IGEGGLPRPVYNVQDEGKVVVTITVNPAGQVIATSINRQTNTVNPALR 238
>gi|50119819|ref|YP_048986.1| TonB-like protein [Pectobacterium atrosepticum SCRI1043]
gi|49610345|emb|CAG73789.1| TonB-like protein [Pectobacterium atrosepticum SCRI1043]
Length = 283
Score = 49.1 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 22/248 (8%), Positives = 61/248 (24%), Gaps = 16/248 (6%)
Query: 7 LAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKG 66
+S + H ++F + I + ++ ++ + +
Sbjct: 10 FVLSCVAHAAL--AVFFLLHYSPKESIEEMAGNAGGSMQVTMMAAAMSQAADTSPPVADP 67
Query: 67 SSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQ 126
+ + + + ++ + ++E L K+
Sbjct: 68 PVAQPTPVVMPILTPLPEHPNPVIKQPVIERKPVTPVTEKKPPVRERKPLEKKPEDKPKE 127
Query: 127 KISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRN-- 184
+ + + Q Q + + T + S V +
Sbjct: 128 QQQARSQQTQQTQQAEKKSESPVATAQTGDAPSPMPSSVGMPGSASTAKAGESDSGQAVR 187
Query: 185 -----------RVIANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKINVDVVGGTELVR 232
+ N PS K + V++ F + G V +
Sbjct: 188 GAGKSNSQNFKALHRRVNYPSRAKALGVEGNVRVKFDITGSGTVTNVQILSETPDGVFGD 247
Query: 233 RMLRENAR 240
++++ AR
Sbjct: 248 DVMKDMAR 255
>gi|78777741|ref|YP_394056.1| TonB-like [Sulfurimonas denitrificans DSM 1251]
gi|78498281|gb|ABB44821.1| TonB-like protein [Sulfurimonas denitrificans DSM 1251]
Length = 248
Score = 49.1 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 19/214 (8%), Positives = 56/214 (26%), Gaps = 7/214 (3%)
Query: 42 DNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRS 101
E + + +E ++ ++ V + + + + E
Sbjct: 26 TLNEIEPNITPSQRVVEIASIESLKKEKKIAVAEQKPEPLPKTVQEPKPVRKLKLEPVVK 85
Query: 102 SSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKEL 161
+ + P + + ++ + + + + ++
Sbjct: 86 AEPVAKPKHIVEQSPIPLKEPLLVAQNEVKNMEVKEDTKNNADIEPTTPIKTTQKSQE-- 143
Query: 162 LSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKI 220
++ S +K + + +R ++ N P +R K + + F + G V
Sbjct: 144 -AQKASSIKKANEIEQYLFKIRAKIQENLRYPPLARRLKIEGESVVSFDIANNGSVNISS 202
Query: 221 NVDVVGGTELVRRMLRENARKAVIKSQAFRLSPS 254
L A + + F P
Sbjct: 203 IGIKKSSG---HESLDRQAMQTIEDVSPFDAPPK 233
>gi|258545748|ref|ZP_05705982.1| biopolymer transport protein TolA [Cardiobacterium hominis ATCC
15826]
gi|258518993|gb|EEV87852.1| biopolymer transport protein TolA [Cardiobacterium hominis ATCC
15826]
Length = 533
Score = 49.1 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 18/142 (12%), Positives = 43/142 (30%), Gaps = 7/142 (4%)
Query: 112 ESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRK 171
S +KA + + + + + E + E +
Sbjct: 380 RSEKEAAEAKAKADAAAAKAKAEADKKRADADRKAFAAQMAAELDSDAEKAAGKESAEAV 439
Query: 172 RIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELV 231
+ + R+ W +P + + L VK+ +L++ G V+ G
Sbjct: 440 AALKDFGVNTLGARMKKFWRLPPNIP--ENLSVKIFVKLDRSGNVVKASIKQGSG----- 492
Query: 232 RRMLRENARKAVIKSQAFRLSP 253
++ + A +AV + +
Sbjct: 493 YKLFDDAALRAVHDASPLPMPK 514
>gi|240948075|ref|ZP_04752485.1| TonB2 energy transducing protein [Actinobacillus minor NM305]
gi|240297555|gb|EER48047.1| TonB2 energy transducing protein [Actinobacillus minor NM305]
Length = 309
Score = 49.1 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 27/269 (10%), Positives = 66/269 (24%), Gaps = 43/269 (15%)
Query: 4 ENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVD---NIYNEDYHSSKYKKIEEP 60
GL S+ +H + ++ PI +E+ S+ E + P
Sbjct: 7 RIGLVGSIAIHGAIVGSVWAAMTQLPQEPIIEQEVTSISMEMLAGVEQQAQVAVAPEDTP 66
Query: 61 V-VQFKGSSQENLVRDFSVQENGDRFSDQTKTH--------------------------- 92
V + + V + + +
Sbjct: 67 VQPEVEEKETPTPVEELKEEPKVEPQKPLKVEPIAEKPKEKKEKPKEKKPEPPKEKPKKI 126
Query: 93 -----ATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKK 147
+ E + K + ++ + ++ A Q I
Sbjct: 127 EKNIEKPKVEKPKLIEKPKPVLEKPAKPIKALEKGIEAKEGIVAKAAPNLPQAIKAQSGV 186
Query: 148 SIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAI----VRNRVIANWNIPSDFKRF---K 200
+ + + + ++ K S + I ++ + N + K
Sbjct: 187 AQGSPAGKGNIGSSAGSDNGNAPKSTASGNEINAYKVTLQRALQRRANNTYPAREKMMRK 246
Query: 201 KLRVKMHFQLNQKGFVLGKINVDVVGGTE 229
V + F ++ G V ++ G +
Sbjct: 247 TGTVTLSFSVSPSGQVTNVQVINSSGNSN 275
>gi|209550591|ref|YP_002282508.1| TonB family protein [Rhizobium leguminosarum bv. trifolii WSM2304]
gi|209536347|gb|ACI56282.1| TonB family protein [Rhizobium leguminosarum bv. trifolii WSM2304]
Length = 443
Score = 49.1 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 27/233 (11%), Positives = 56/233 (24%), Gaps = 10/233 (4%)
Query: 26 NVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRF 85
V P + + + ++ VV Q V+ +
Sbjct: 198 TVVAAEPEILVSQNPAETFVAQPMATVVPEQPAPDVVPTIVPQQAMTAAVQPVEVQPEEV 257
Query: 86 SDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAE 145
+ + + S + E P K E
Sbjct: 258 QPEEVQPEEVKPVETAEVSPKPEEKPEPKPASKVEKPKPDTKEQPRKKVEPTGGKNGADR 317
Query: 146 KKSIDTVVVRPDKKE----LLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKK 201
+ V D E + + V+ R+ +P ++KR
Sbjct: 318 RDMKRGVTTGQDAPEFNGIATTGGRGDGIGSAAVANYPGKVQKRIRRAIRVPDEYKRMGG 377
Query: 202 -LRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSP 253
+ V++ ++ G + G + L + A V ++ F P
Sbjct: 378 AISVRLKLTIDGTGRLSSVSVAGSSGIPD-----LDKVALDGVRRAAPFPPLP 425
>gi|148653366|ref|YP_001280459.1| TonB family protein [Psychrobacter sp. PRwf-1]
gi|148572450|gb|ABQ94509.1| TonB family protein [Psychrobacter sp. PRwf-1]
Length = 296
Score = 49.1 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 31/265 (11%), Positives = 65/265 (24%), Gaps = 36/265 (13%)
Query: 8 AISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIE-EPVVQFKG 66
+S+I+H L L+ F + + + + E+ + + + + G
Sbjct: 27 ILSLIVHGSILALIIFL---HRIPQLETTPSIETSIVTPEELAAMQAEVRANRDNMMASG 83
Query: 67 SSQENLVRDFSVQE----------------------NGDRFSDQTKTHATENETKRSSSS 104
SV E + ++E E +
Sbjct: 84 VPVTPEFSPQSVPESTHTAELSHESTFSKMSSFFRNEPLPEPMPQSSVSSEPELSEPLEA 143
Query: 105 KGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSK 164
+ +P Q S + + Q K S
Sbjct: 144 PDITQPDDLTDFAGEQNPLSSQPTSPPPKVKANSQDSGQVAATFASGAEGSSTKSTAASG 203
Query: 165 VEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDV 224
S ++ S D + + WN P RV + ++ G V
Sbjct: 204 SATGSSNKVSSGDISGALVGMIKPLWNPPVGRVGT---RVSVSVTVDANGSVQSV----- 255
Query: 225 VGGTELVRRMLRENARKAVIKSQAF 249
L+++ A+ ++
Sbjct: 256 --NANTSDEALKQSLESAIRQASPL 278
>gi|317061619|ref|ZP_07926104.1| TonB protein [Fusobacterium sp. D12]
gi|313687295|gb|EFS24130.1| TonB protein [Fusobacterium sp. D12]
Length = 247
Score = 48.7 bits (114), Expect = 7e-04, Method: Composition-based stats.
Identities = 27/247 (10%), Positives = 69/247 (27%), Gaps = 28/247 (11%)
Query: 1 MRLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVD-NIYNEDYHSSKYKKIEE 59
M ++ L +S +H++ L Y + + + +++SV + N +
Sbjct: 1 MAMKKYLVLSFCIHILCFLGFYHHEMHKGEEKLPLNQVISVSFVVENPPPSDNPGSPNVA 60
Query: 60 PVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMP 119
V K + K + K + ++ +S +
Sbjct: 61 DRVLEKKENS-----------------TNEKPKEQPKKEKPKKEEQVKEKTFDSKMATKD 103
Query: 120 VSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAI 179
+++ S + + + D + + + +
Sbjct: 104 AKEVKQEESSAVEADSDNKESSETGKSSGNDNPFYGSNFQANGDGSYTALSSEGIN---- 159
Query: 180 AIVRNRVIANW-NIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLREN 238
+ V ++ + +++ VK+ F + KG V V +
Sbjct: 160 YQILQEVEPDYPSQAEAIGYDQRVSVKVKFLVGLKGNVENIQIVKSHKKLG-----FDDE 214
Query: 239 ARKAVIK 245
KA+ K
Sbjct: 215 VMKAIKK 221
>gi|260461543|ref|ZP_05809790.1| conserved hypothetical protein [Mesorhizobium opportunistum
WSM2075]
gi|259032613|gb|EEW33877.1| conserved hypothetical protein [Mesorhizobium opportunistum
WSM2075]
Length = 130
Score = 48.7 bits (114), Expect = 7e-04, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 29/85 (34%), Gaps = 5/85 (5%)
Query: 172 RIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVG--GTE 229
+ + + +A V + A W P+ V + F + G ++G V G
Sbjct: 23 QAATLNTMADVGAAIQACWTPPA---DAGNSTVTLSFSFKRDGTLIGPPRATAVKVAGDY 79
Query: 230 LVRRMLRENARKAVIKSQAFRLSPS 254
R+ + A AV S +
Sbjct: 80 KARQAFIDAATAAVKNCTPLTFSAT 104
>gi|329113723|ref|ZP_08242498.1| NB Family Protein [Acetobacter pomorum DM001]
gi|326696986|gb|EGE48652.1| NB Family Protein [Acetobacter pomorum DM001]
Length = 285
Score = 48.7 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 21/192 (10%), Positives = 46/192 (23%), Gaps = 7/192 (3%)
Query: 64 FKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPY 123
+ S D + + T S + +
Sbjct: 78 PEPVSTPTPPTDAPIGPQQTQSIPDPAPVEPPKVTAPPSPAPNPPVPVPKPEKPRKIVKK 137
Query: 124 DKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVR 183
K + D + + + + SS+ +
Sbjct: 138 HKP-VPHLKKPIPDKTPPAETTTAPPSSEAPPAPAQAAPAPGASSSKASHDPVTWQGALL 196
Query: 184 NRVIANWNIPSDF-KRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKA 242
++ PSD ++ + F +++KG VL G +L + A
Sbjct: 197 AQLEKFKRYPSDAMADHQEGVPTVTFSMDRKGHVLSVTLASSSGHA-----LLDQEAVAL 251
Query: 243 VIKSQAFRLSPS 254
++Q + P
Sbjct: 252 PKRAQPLPIPPD 263
>gi|294785128|ref|ZP_06750416.1| TonB protein [Fusobacterium sp. 3_1_27]
gi|294486842|gb|EFG34204.1| TonB protein [Fusobacterium sp. 3_1_27]
Length = 259
Score = 48.7 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 35/274 (12%), Positives = 78/274 (28%), Gaps = 22/274 (8%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
++ + IS++LH++ L QL + E++ + ++ S
Sbjct: 1 MKKYILISLVLHLIILFGFGVMQTTQLGKDKPKNEVVPI--VFVAKKTSENPGSKVLDTQ 58
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
+ + S E + + ++ E + S+ + + + P +
Sbjct: 59 EREKQSPEPPKPKVEKKPEEKKPEEKKVEKKPEKKEIESNIPSKDAKP----VEKQPETT 114
Query: 123 YDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIV 182
+ S + S + T + S+ +
Sbjct: 115 TSENTNSTDKGESTSSDNSSSGGGSTNGTGSGDDGFGSNFISDGDGGYIALSSKGINYQI 174
Query: 183 RNRVIANW-NIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARK 241
N V ++ + K+++V + F + KG V K
Sbjct: 175 INEVEPDYPSQAESIGYSKQVKVTVKFLVGLKGNVEKAEITQSHKDLG-----FDAEVMK 229
Query: 242 AVIKSQAFRLSPSTYKSWRNI------TLFFVPS 269
A+ K + Y + +NI T F P
Sbjct: 230 AIKKWR----FKPIYHNGKNIKVYFVKTFVFDPQ 259
>gi|261855153|ref|YP_003262436.1| protein TolA [Halothiobacillus neapolitanus c2]
gi|261835622|gb|ACX95389.1| protein TolA [Halothiobacillus neapolitanus c2]
Length = 345
Score = 48.7 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 15/107 (14%), Positives = 33/107 (30%), Gaps = 7/107 (6%)
Query: 163 SKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINV 222
+S+ + A ++ +V A W P + + G VL +
Sbjct: 244 QDELSASQAQGILAAYAAAIQQKVTAQWFKPPG--WQPDWTCDVRISQAKDGTVLNVKIL 301
Query: 223 DVVGGTELVRRMLRENARKAVIKSQAFRLSPSTYKSWRNITLFFVPS 269
G ++ + + ++AV ++ L I F +
Sbjct: 302 QCDGD-----QLFQRSVQQAVERASPLPLPSDMSLFQSTINFKFRAN 343
>gi|282599682|ref|ZP_05971476.2| putative outer membrane receptor-mediated transport energizer
protein TonB [Providencia rustigianii DSM 4541]
gi|282568214|gb|EFB73749.1| putative outer membrane receptor-mediated transport energizer
protein TonB [Providencia rustigianii DSM 4541]
Length = 225
Score = 48.7 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 23/228 (10%), Positives = 63/228 (27%), Gaps = 16/228 (7%)
Query: 50 HSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQA 109
+ + + Q+ + +V GD F+ + + + S + +
Sbjct: 2 TAPLISPVVTVALSQFLIEQQVSIPKETVSVVGDEFNAIEEFEYANIKVSKQHSHQNNAS 61
Query: 110 LKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKV---- 165
+ V + E+ + S + K L+
Sbjct: 62 NTIAEKTPKEVKSEKCNPLKNKEKPEEKAKKESPWDDLQTQRAKEGESKVNSLAAGLQGD 121
Query: 166 ----EKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKI 220
Q + ++ + ++ P ++ + + V++ FQL +G ++
Sbjct: 122 LSHFSDGENNTNTKQRYLDKIKREIDSHKQYPRRARKMRIQGGVQIRFQLTSQGEIVNAS 181
Query: 221 NVDVVGGTELVRRMLRENAR-KAVIKSQAFRLSPSTYKSWRNITLFFV 267
V E+ A+ + + P ++ + F
Sbjct: 182 VVSSEKS------QFFESTILDAIRRCKPLGPPPKGLGRNMDLQINFS 223
>gi|163802042|ref|ZP_02195938.1| TolA protein [Vibrio sp. AND4]
gi|159174183|gb|EDP58991.1| TolA protein [Vibrio sp. AND4]
Length = 342
Score = 48.7 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 19/181 (10%), Positives = 65/181 (35%), Gaps = 2/181 (1%)
Query: 4 ENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNI--YNEDYHSSKYKKIEEPV 61
+AIS+ LH++ ++ L + + + P +M+ I + + ++ E
Sbjct: 12 TKPIAISVGLHMLLVVALLWGTDFNMTKPEPTGQMVQAVVIDPKLVQQQAKEIRQQREKA 71
Query: 62 VQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVS 121
+ + + + L R+ E + + E + K + +++ +A+++
Sbjct: 72 AKKEQNRLDKLRREAEQLEKNRKAEEAQIRKLKEQQAKDAKAAREAEAVRKKKEQERKAE 131
Query: 122 PYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAI 181
+K + K + + + + + +K ++ + + ++
Sbjct: 132 EERTRKAKQQAAKAEQERKAKEEAVRKAEQQRLAREKAAKDAEEKAKREREAAAKAEQER 191
Query: 182 V 182
+
Sbjct: 192 I 192
>gi|332881155|ref|ZP_08448815.1| TonB family domain protein [Capnocytophaga sp. oral taxon 329 str.
F0087]
gi|332680904|gb|EGJ53841.1| TonB family domain protein [Capnocytophaga sp. oral taxon 329 str.
F0087]
Length = 271
Score = 48.7 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 29/245 (11%), Positives = 66/245 (26%), Gaps = 11/245 (4%)
Query: 4 ENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSS--KYKKIEEPV 61
L ++ + + +LLL+F + + V+ IY D +
Sbjct: 10 RKSLVLTTAVMSIVVLLLFFA----GMTYLDPPPESGVEVIYGVDVTGMGERTTPPSAAQ 65
Query: 62 VQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVS 121
+ E++ + + E + Q K ++ K P
Sbjct: 66 QVETQTPPESVPEETTSTEVKENLLAQDNDETVAIAEAPKKQEKKKETPKTETPKPDPKP 125
Query: 122 PYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAI 181
+ + + + G A + + S
Sbjct: 126 SRETSEALSSILGAANAGGSGTAGQGDGQRPGYQGQIDGSQYADSYYGAGGGGSSGKGWG 185
Query: 182 VRNR-VIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENAR 240
++ R + + D ++ RV + ++++ G V+ L + AR
Sbjct: 186 LKGRSIATQGKVVQDC--NEEGRVVVQIEVDRSGKVVKATAGVKGTTNSAQC--LLDAAR 241
Query: 241 KAVIK 245
K K
Sbjct: 242 KTAYK 246
>gi|315611788|ref|ZP_07886710.1| alpha-L-fucosidase FucA [Streptococcus sanguinis ATCC 49296]
gi|315316203|gb|EFU64233.1| alpha-L-fucosidase FucA [Streptococcus sanguinis ATCC 49296]
Length = 2041
Score = 48.7 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 14/127 (11%), Positives = 35/127 (27%), Gaps = 5/127 (3%)
Query: 42 DNIYNEDYH--SSKYKKIEEPVVQFKGSSQENLVR-DFSVQENG--DRFSDQTKTHATEN 96
+ D + + K +E V Q ++ E + + + + E Q + A
Sbjct: 1635 KLVEIADQAIAAIQEAKTQEAVNQALETALEQISKLEAAQPEKPARPETPAQPEKPAQPE 1694
Query: 97 ETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRP 156
+ + + + + P P + ++ Q Q + +
Sbjct: 1695 KPAQPETPAQPETPAQPEQPAQPEKPAQPETPAQPETPAQPEQPAQPEQPAQPEKPAQPE 1754
Query: 157 DKKELLS 163
S
Sbjct: 1755 KPITSSS 1761
>gi|190893276|ref|YP_001979818.1| hypothetical protein RHECIAT_CH0003702 [Rhizobium etli CIAT 652]
gi|190698555|gb|ACE92640.1| hypothetical protein RHECIAT_CH0003702 [Rhizobium etli CIAT 652]
Length = 102
Score = 48.7 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 4/58 (6%)
Query: 216 VLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRL-SPSTYKSWRNITLFF---VPS 269
++G V GG+ R+ L A +AV++S F + Y+SWR + L F P+
Sbjct: 44 IVGSPEVTAAGGSAAARKALSAAALRAVLRSSPFTMLPKENYESWREVVLRFESGDPT 101
>gi|312115237|ref|YP_004012833.1| TonB family protein [Rhodomicrobium vannielii ATCC 17100]
gi|311220366|gb|ADP71734.1| TonB family protein [Rhodomicrobium vannielii ATCC 17100]
Length = 271
Score = 48.7 bits (114), Expect = 9e-04, Method: Composition-based stats.
Identities = 23/221 (10%), Positives = 63/221 (28%), Gaps = 10/221 (4%)
Query: 43 NIYNEDYHSSKYKKIEEPVVQ--FKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKR 100
+ ED + +V+ ++ + +RD + + +Q + E +
Sbjct: 43 LLQPEDAAPALIDPAGAVMVELSPIVAAPDTPMRDVATGAESEASPEQEVSEPKPKENQL 102
Query: 101 SSSSKGEQALKESALLRMPVSPYDKQKISKATNK--EQDLQGISFAEKKSIDTVVVRPDK 158
++ + P + + ++ + +K +
Sbjct: 103 QEEETKLPEFDKAEAIIEQARPEPQPEKPVEKKPVEKKPEEQKPQRQKSTARAAAAPRPN 162
Query: 159 KELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKR-FKKLRVKMHFQLNQKGFVL 217
K + + + S + A R+ V+ + N + F ++++G VL
Sbjct: 163 KARHAAFNAAPSAGVSSSASAASWRSAVVGHLNRHKRHPGGASNGTASVAFAIDRQGRVL 222
Query: 218 GKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPSTYKS 258
G ++ L A ++ P+
Sbjct: 223 WARLTRSSGSSQ-----LDAEAVSLARRASPVPAPPAEMAR 258
>gi|330936712|gb|EGH40900.1| tolA protein [Pseudomonas syringae pv. pisi str. 1704B]
Length = 329
Score = 48.7 bits (114), Expect = 9e-04, Method: Composition-based stats.
Identities = 26/213 (12%), Positives = 57/213 (26%), Gaps = 11/213 (5%)
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
K + + + + + + E K + + +
Sbjct: 122 DAKKLEDKQQADIAKKKAEEEAKKKAEEDAKKAAAEEAKKQAADEAKKKAAEDAKKKAAE 181
Query: 123 YDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIV 182
K+K + + K+ AE K + K + R + ++
Sbjct: 182 DAKKKAAADSAKKAQEAARKSAEDKKAQALADLLSDKPERQQALADERGDETAGSFDDLI 241
Query: 183 RNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKA 242
R R W+ P + + V + + G + G +A A
Sbjct: 242 RVRASEGWSRPPSAR--NNMSVTLQIGMLPDGTIASVSIAKSSGDG-----PFDSSAVAA 294
Query: 243 VIKSQAFR----LSPSTYKSWRNITLFFVPSKM 271
V L P+ + +R+ + F P +
Sbjct: 295 VKNIGRLTEMQGLKPADFAPYRSFKMTFTPGDL 327
>gi|86749989|ref|YP_486485.1| hypothetical protein RPB_2872 [Rhodopseudomonas palustris HaA2]
gi|86573017|gb|ABD07574.1| conserved hypothetical protein [Rhodopseudomonas palustris HaA2]
Length = 147
Score = 48.7 bits (114), Expect = 9e-04, Method: Composition-based stats.
Identities = 9/86 (10%), Positives = 25/86 (29%), Gaps = 2/86 (2%)
Query: 167 KSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVG 226
+++ + D + + + W P ++ + + G +LGK +
Sbjct: 23 RAAVAQEARIDNLDGLFAALKQCWRPPQLAPGDPGKQITVLVSFKRDGQILGKPRITFES 82
Query: 227 GTELVRRMLR--ENARKAVIKSQAFR 250
T L + + +
Sbjct: 83 ATTPGFDSLAYRIAVMETLQRCTPLP 108
>gi|325108782|ref|YP_004269850.1| prenyltransferase/squalene oxidase [Planctomyces brasiliensis DSM
5305]
gi|324969050|gb|ADY59828.1| Prenyltransferase/squalene oxidase [Planctomyces brasiliensis DSM
5305]
Length = 742
Score = 48.7 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 22/269 (8%), Positives = 67/269 (24%), Gaps = 37/269 (13%)
Query: 4 ENGLAISMILHVMFL-LLLYFNFNVQLLVPISRREMLSVDNI-------YNEDYHSSKYK 55
L S+++H+M ++ F + + E + + +I +D +
Sbjct: 57 SKSLLFSVLIHLMSGAGVIVFAPGLPVEKKERDPEPIQIQDIMLSGTRQTRDDQPGNTPA 116
Query: 56 KIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTK--------THATENETKRSSSSKGE 107
P Q + + E + +R +Q + +
Sbjct: 117 WEAAPTQQKEITRAEREIPTPEPSAIPEREQEQPEELLGNDIGALDMTLPRVPEQPQLAQ 176
Query: 108 QALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVR----PDKKELLS 163
++ + + ++ + + + V + +
Sbjct: 177 NDAEQMRSEAADIPEFAPAEVPDPAVEMTASPEETRVIRSPRPDAVTDTEMVQRPESGGA 236
Query: 164 KVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQ-----KGFVLG 218
+ + + R ++ + + G V G
Sbjct: 237 DRLADVPIETRTLRSPDLERG-------PVPAMPDRGEIADAIERRQAPEQTTDDGMVTG 289
Query: 219 KINVDVVGGTELVRRMLRENARKAVIKSQ 247
+ ++ G + + +AV +S
Sbjct: 290 QDMINPEGPS-----AASDADNRAVTRSS 313
>gi|256845583|ref|ZP_05551041.1| TonB protein [Fusobacterium sp. 3_1_36A2]
gi|256719142|gb|EEU32697.1| TonB protein [Fusobacterium sp. 3_1_36A2]
Length = 259
Score = 48.7 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 35/274 (12%), Positives = 78/274 (28%), Gaps = 22/274 (8%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
++ + IS++LH++ L QL + E++ + ++ S
Sbjct: 1 MKKYILISLVLHLIILFGFGVMQTTQLGKDKPKNEVVPI--VFVAKKTSENPGSKVLDTQ 58
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
+ + S E + + ++ E + S+ + + + P +
Sbjct: 59 EREKQSPEPPKPKVEKKPEEKKPEEKKVEKKPEKKEIESNIPSKDAKP----VEKQPETT 114
Query: 123 YDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIV 182
+ S + S + T + S+ +
Sbjct: 115 TSENTNSTDKGESTLSDNSSSGGGSANGTGSGDDGFGSNFISDGDGGYIALSSKGINYQI 174
Query: 183 RNRVIANW-NIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARK 241
N V ++ + K+++V + F + KG V K
Sbjct: 175 INEVEPDYPSQAESIGYSKQVKVTVKFLVGLKGNVEKAEITQSHKDLG-----FDAEVMK 229
Query: 242 AVIKSQAFRLSPSTYKSWRNI------TLFFVPS 269
A+ K + Y + +NI T F P
Sbjct: 230 AIKKWR----FKPIYHNGKNIKVYFVKTFVFDPQ 259
>gi|319778219|ref|YP_004129132.1| ferric siderophore transporter, periplasmic energy transduction
protein TonB [Taylorella equigenitalis MCE9]
gi|317108243|gb|ADU90989.1| ferric siderophore transporter, periplasmic energy transduction
protein TonB [Taylorella equigenitalis MCE9]
Length = 298
Score = 48.7 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 28/289 (9%), Positives = 72/289 (24%), Gaps = 36/289 (12%)
Query: 8 AISMILHVMFLL-----------LLYFNFN---VQLLVPISRREMLSVDNIYNEDYHSSK 53
+S+ LHV ++ L F + + ++ + + + + SSK
Sbjct: 1 MLSIALHVFVIIYLNYKHSDSFELGGFGGEIGDFESITILTELPVGELKDFSIKSSQSSK 60
Query: 54 YKKIEEPVVQF----------------KGSSQENLVRDFSVQENGDRFSDQTKTHATENE 97
+ + Q + E + E+ Q
Sbjct: 61 AEPETQIEKQEMLEEKIEEQEELPSEDIDVNSEAPKSEVIAVESNKDADIQKDIKKEVIA 120
Query: 98 TKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPD 157
+++ + + Q + ++ S A T
Sbjct: 121 KEKTKPKPVPKTKPKPVPKSSKKPKPSTQTNNSNNTNDKPSAVDSIAGASVNSTASAPVS 180
Query: 158 KKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDF-KRFKKLRVKMHFQLNQKGFV 216
+ S+ + + + + P ++ V + ++ G V
Sbjct: 181 GSGNKVSSPSTGVGSSNSKSYQSSLFAHLNRHKTYPQSALINKEEGVVAVRIVIDASGNV 240
Query: 217 LGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPSTYKSWRNITLF 265
L L + AR +K+ P++ + ++
Sbjct: 241 LSAEVKRASK-----YVALNQAARDLFMKASPLPKPPNSMMNGETLSFT 284
>gi|271499351|ref|YP_003332376.1| TonB family protein [Dickeya dadantii Ech586]
gi|270342906|gb|ACZ75671.1| TonB family protein [Dickeya dadantii Ech586]
Length = 288
Score = 48.7 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 22/260 (8%), Positives = 71/260 (27%), Gaps = 20/260 (7%)
Query: 1 MRLENGLAISMILHVMFLLLLYFNFNVQLLVP--------------ISRREMLSVDNIYN 46
M++ + +S+ +H+ L L + + V ++ SV +
Sbjct: 1 MKVTHSFLLSVAVHLSVLWALLWGVVSREQVVLQAGRAGESAASMHVTSFSPHSVRLFSS 60
Query: 47 EDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKG 106
S + + EP + + A + ++ +
Sbjct: 61 HPEPSPSVEPVTEPETPTVPGTTAVADASVVPVNERAVVRTVSAETAVKTRPQKPPETPH 120
Query: 107 EQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELL---- 162
+++ N++ + + ++ T+ +
Sbjct: 121 TPVDATPVRASEKNDVRKTPPPARSDNRDMPVAVETPLAERGNRTMASVSASASVGGQAA 180
Query: 163 -SKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKI 220
+ + ++ + V + + P + + +V++ F + G V
Sbjct: 181 PQGESTQGQASRGAGNSQSDVLKALQRRVSYPVRARSMGVEGQVRLRFDVTSSGTVTNIR 240
Query: 221 NVDVVGGTELVRRMLRENAR 240
+ ++++ AR
Sbjct: 241 VLSENPDGMFSSDVIKDMAR 260
>gi|188997278|ref|YP_001931529.1| TonB family protein [Sulfurihydrogenibium sp. YO3AOP1]
gi|188932345|gb|ACD66975.1| TonB family protein [Sulfurihydrogenibium sp. YO3AOP1]
Length = 277
Score = 48.7 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 24/255 (9%), Positives = 68/255 (26%), Gaps = 8/255 (3%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
LA+S+++H + + + ++ E + KK+ +
Sbjct: 12 SLALSLLIHALLFSSFFLLKPKPKEEKEKIITVSLDEDFKKEFKPPVEEKKMIQKNEALP 71
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
+ V + + + + + E + + K+ A +
Sbjct: 72 QTKSLPKVEEKKIVQQKETLPPPQPAPKPQPEKPKPIVKPESETPKQEAQKPQEKQNTQQ 131
Query: 126 QKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIV--- 182
+ Q + K + ++ +K + +
Sbjct: 132 PIKQNPPQTQPTQQTQPTTAQTQKTEPTPIDLSKGRPDQFKQPEKKEEDIDGYLKELIRY 191
Query: 183 --RNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENAR 240
+ + P + + +V + +N+ G + V +L A
Sbjct: 192 LNQQARERDLYPPIAKRLKIEGQVIVRVTINEDGTIDENSIKIVESSG---YNVLDRGAI 248
Query: 241 KAVIKSQAFRLSPST 255
+ + K Q ++ P
Sbjct: 249 EILKKLQPYKKPPKR 263
>gi|91792751|ref|YP_562402.1| hypothetical protein Sden_1393 [Shewanella denitrificans OS217]
gi|91714753|gb|ABE54679.1| TolA [Shewanella denitrificans OS217]
Length = 328
Score = 48.4 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 31/233 (13%), Positives = 61/233 (26%), Gaps = 16/233 (6%)
Query: 43 NIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSS 102
+ E K E E + E + + +
Sbjct: 104 EVEREQKVLETQKANEAAKAAKLKLQLEQEKAQKAETERKQIEQKRKASEEAAKQAAEKR 163
Query: 103 SSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELL 162
+ A K++ L R K+K ++++ + A+ +
Sbjct: 164 KQEEAAAAKKAELERKQREDERKRKEEAERKQKEEAERKRKADADARARQEQEMADAMAA 223
Query: 163 SKVEKSSRKRIPSQDAIAIVR----NRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLG 218
S + + R + N + + K+ +L GFV
Sbjct: 224 EHSALSQTRNKQVMSEVDKYRSMIAATIQRNLVVDESMRGK---SCKVFIRLANDGFVTA 280
Query: 219 KINVDVVGGTELVRRMLRENARKAVIKSQAFRLSP--STYKSWRNITLFFVPS 269
+D ++ A+ A+ K+ +SP Y R I L P
Sbjct: 281 VQTLDGD-------PVICRAAKNAINKAGRLPVSPEADVYNQMREINLTVSPE 326
>gi|189462956|ref|ZP_03011741.1| hypothetical protein BACCOP_03658 [Bacteroides coprocola DSM 17136]
gi|189430238|gb|EDU99222.1| hypothetical protein BACCOP_03658 [Bacteroides coprocola DSM 17136]
Length = 280
Score = 48.4 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 28/242 (11%), Positives = 55/242 (22%), Gaps = 19/242 (7%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDN--IYNEDYHSSKYKKIEEPVVQ 63
G+ +++LH+ +LLL F I + V + Y E V+
Sbjct: 8 GIIGTVVLHIFVVLLLLFC--SLTRPEIQEEGGVPVMLGNTQMAQGDADPYTMTEVDVLP 65
Query: 64 FKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPY 123
+S + + + + K ++ + PV
Sbjct: 66 QPETSVPEPEVTPEPEVKQPMITQDDEPSIQVKKEKPKEEKPKKEVTPKKKQETKPVVTK 125
Query: 124 DKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSS-RKRIPSQDAIAIV 182
K+K E++ A K S +
Sbjct: 126 PKEKTEAEKRAEEERAAAQAAANKIAGAFGKGSKMGSKGSATSGQGIEGSPDGNGNTGKI 185
Query: 183 RNRVIANWNIPSDFKRF-------------KKLRVKMHFQLNQKGFVLGKINVDVVGGTE 229
V + + + RV + +N G V+
Sbjct: 186 SG-VGGYGTFDLNGRSLGPGGLPVPVYNVQDEGRVVVTIVVNPAGRVISTSINKRTNTVN 244
Query: 230 LV 231
Sbjct: 245 PA 246
>gi|227113316|ref|ZP_03826972.1| TonB-like protein [Pectobacterium carotovorum subsp. brasiliensis
PBR1692]
Length = 273
Score = 48.4 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 20/208 (9%), Positives = 56/208 (26%), Gaps = 6/208 (2%)
Query: 48 DYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGE 107
+ + VQ S Q+ V + Q + E +
Sbjct: 47 EAPPPAMMLMVADSVQSTPSPQDAPVGPQQTLSTPQEAATQPEKMTQEVPLLAPAPKPVI 106
Query: 108 QALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEK 167
A ++ +K + T ++++ + ++
Sbjct: 107 AAAQKEKPQPQKKVQKKMEKPVQETTPQEEIAPSEKPPAPVTSAPLPGSSQQVAAPYNSD 166
Query: 168 SSRKRIPSQDAIAIVRNRVIANWNIPSDF-KRFKKLRVKMHFQLNQKGFVLGKINVDVVG 226
+++ D + + + P+ ++ + ++ L++ G VL G
Sbjct: 167 AAQMHKGVADWSSQLLAHLSRYKRYPAQAVRQRLQGVAQIRVTLDRTGNVLAVSLASSSG 226
Query: 227 GTELVRRMLRENARKAVIKSQAFRLSPS 254
L + + ++Q P+
Sbjct: 227 -----VMPLDKESVALPQRAQPLPAPPA 249
>gi|190575738|ref|YP_001973583.1| putative TonB dependent receptor protein [Stenotrophomonas
maltophilia K279a]
gi|190013660|emb|CAQ47295.1| putative TonB dependent receptor protein [Stenotrophomonas
maltophilia K279a]
Length = 239
Score = 48.4 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 16/181 (8%), Positives = 45/181 (24%), Gaps = 9/181 (4%)
Query: 75 DFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNK 134
+ + + + ++ + K + A ++ D
Sbjct: 47 ELAPMAQAPPVPPREVATGPLQQQQQRQAPKPALREQPEAPVQPQG---DLPPPRTPEPT 103
Query: 135 EQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPS 194
+ + S V + + + + + + P
Sbjct: 104 PSPDVADANVAQTSAPPQVAADAAARYTAPQTTAGERSRAEASWEGRLLGHLQKHRRYPR 163
Query: 195 DFKR-FKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSP 253
+R ++ V + F + + G V G G +L + V ++ P
Sbjct: 164 QAERLRQQGVVYVRFAVARDGAVSGLKLGRSSG-----FALLDQETLDTVQRASPVPAPP 218
Query: 254 S 254
+
Sbjct: 219 A 219
>gi|319426010|gb|ADV54084.1| TonB system biopolymer transport inner membrane component, TolA
[Shewanella putrefaciens 200]
Length = 329
Score = 48.4 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 25/231 (10%), Positives = 77/231 (33%), Gaps = 13/231 (5%)
Query: 42 DNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRS 101
E +++ K+ + Q + + D ++E + +++ A E
Sbjct: 107 KLQEIETQKANEAAKVAQVKQQQEKEKAQKAEADRKLKEQERKVAEEAAQKAAEKRKAEE 166
Query: 102 SSSKGEQALKESALLRMPVSPYDKQ-KISKATNKEQDLQGISFAEKKSIDTVVVRPDKKE 160
+++ + ++ + K+ + +++ + A + + ++
Sbjct: 167 AAAAKAETERKQKEEAERKKKEEADRKLKEEAERKRKADAEAKARAQQEQEMADALAAEQ 226
Query: 161 LLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKI 220
+ + + A++++ + N + + K+ +L GFV+
Sbjct: 227 AALSQTMNKQMQSEVGKYTAMIKSTIQRNLVVDESMRGK---SCKVSVRLANDGFVI--- 280
Query: 221 NVDVVGGTELVRRMLRENARKAVIKSQAFRLSPST--YKSWRNITLFFVPS 269
T+ + + A++K+ +SP Y + I L P+
Sbjct: 281 ----SSQTDGGDANVCRATKAAILKAGKLPVSPDPAVYNLMKEINLIVEPT 327
>gi|297568867|ref|YP_003690211.1| hypothetical protein DaAHT2_0888 [Desulfurivibrio alkaliphilus
AHT2]
gi|296924782|gb|ADH85592.1| hypothetical protein DaAHT2_0888 [Desulfurivibrio alkaliphilus
AHT2]
Length = 319
Score = 48.4 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 10/196 (5%), Positives = 46/196 (23%), Gaps = 4/196 (2%)
Query: 45 YNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSS 104
+ ++ + Q + + + +
Sbjct: 97 STPEPAAAPRGEPRTIAPQTPTKVAVRSDPPPAPLSTRPIRTRADDDELRQLREYYQLEA 156
Query: 105 KGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSK 164
+ +A +++ + R ++ I ++ ++
Sbjct: 157 QAREARRDAEIARQRAVDAVRENILAQATPAASPDQRETP--TPPAAANTTEQAGQVTAR 214
Query: 165 VEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDV 224
+ +++ + ++ + A W +P+ + + + + G +
Sbjct: 215 RGAPTSLDAATREYLVRLQQHIQAYWTLPNLPSWDENTVATIVITIRRDGTLDNVAFEKQ 274
Query: 225 VGGTELVRRMLRENAR 240
+ L A
Sbjct: 275 S--ENMYFNQLARKAI 288
>gi|157371705|ref|YP_001479694.1| TonB family protein [Serratia proteamaculans 568]
gi|157323469|gb|ABV42566.1| TonB family protein [Serratia proteamaculans 568]
Length = 266
Score = 48.4 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 36/253 (14%), Positives = 76/253 (30%), Gaps = 30/253 (11%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPV 61
R G ++ HV +LL F + Q L P+ + + + K + V
Sbjct: 17 RWARGFLCAIAAHVALVLL--FYWPPQPLPPMQLAPPAVMMSWAAQIEAPETPKPLPLGV 74
Query: 62 VQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVS 121
Q + ++ + +++TK E + + Q E + + +
Sbjct: 75 QQAESAAAQPAEPQDQPDLPKLARAEKTKISVAEKKRTEHQPPQKAQPKPEQQVKEIRHA 134
Query: 122 PYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAI 181
KA N + ++ S + V + +
Sbjct: 135 AASSAAAPKALNIARQTAAPLNSDSASSEQVRLS----------------------WESR 172
Query: 182 VRNRVIANWNIPSDFKRFKK-LRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENAR 240
V+ + P D +R ++ ++ F ++ +G V G L A
Sbjct: 173 VKGMLNRIKRYPPDAQRRRRTGMPQVSFSVDAQGRVFDLTLHAPSGTAS-----LDREAL 227
Query: 241 KAVIKSQAFRLSP 253
V+++Q P
Sbjct: 228 AVVMRAQPLPPPP 240
>gi|254489185|ref|ZP_05102389.1| TonB family C-terminal domain protein [Roseobacter sp. GAI101]
gi|214042193|gb|EEB82832.1| TonB family C-terminal domain protein [Roseobacter sp. GAI101]
Length = 271
Score = 48.4 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 26/254 (10%), Positives = 62/254 (24%), Gaps = 11/254 (4%)
Query: 1 MRLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP 60
M L G +S+ +H + L L P + + I +
Sbjct: 11 MGLYLGAGLSIGVHGALVALWLT--QAAALEPPKETGIQGRELIDLAEVEMIIAAPETNL 68
Query: 61 VVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPV 120
+ + + +E +D K +E +
Sbjct: 69 PDGAPAEDSKATLDSPAEREEAKASNDPILAQVPRAPDDPELQFKIANPDQEVETEKDAT 128
Query: 121 SPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIA 180
+ + T + D KK+ L+ E++ +A
Sbjct: 129 EVPSEIQEETQTENAPQSTAAAPEASAGQDEKSQTAAKKQGLTDAERAEITDWQKSLVLA 188
Query: 181 IVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENAR 240
+ + + + + F ++ G + + G +L + A
Sbjct: 189 LNAGKDYPRRAREARAEG----TTTVAFTVDHYGQIKAREVSKSSG-----WPVLDKAAL 239
Query: 241 KAVIKSQAFRLSPS 254
+ + P+
Sbjct: 240 DIFDRQKTLPAPPA 253
>gi|332534223|ref|ZP_08410068.1| protein TolA [Pseudoalteromonas haloplanktis ANT/505]
gi|332036303|gb|EGI72774.1| protein TolA [Pseudoalteromonas haloplanktis ANT/505]
Length = 308
Score = 48.4 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 37/317 (11%), Positives = 97/317 (30%), Gaps = 60/317 (18%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLS---------VDNIYNEDYHSSK 53
+ + + S++LH+ LY + N+ P L+ V + + +
Sbjct: 1 MNSSVVKSIVLHLGIGGFLYASANIHPPTPKVMEVTLNSAIPTPDKAVSAVTVDQKQVEQ 60
Query: 54 YKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKES 113
+ + K S+++ +RD + R +++ + + + + E+A E+
Sbjct: 61 KIAELQKKEKDKKSAEDKRIRDLERRAANARKQRESEARNIKKLEQERKAKEKEKAQAEA 120
Query: 114 ALLRMPVSPYDKQKISKATNKEQD------------------------------------ 137
+ ++ +K K++
Sbjct: 121 EAKKARAIEQKERAKAKQAEKQKQEAENAAKAAADKRKAEEEALKKAEAERKKREEEAKE 180
Query: 138 ---LQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPS 194
+ + + K++ + + A++ R+ N I
Sbjct: 181 RAAEAERKRQQAMQEQMLQEQLAKEQAARSKIRQQQVVSEVDKYRALIMARIQQNLLIDE 240
Query: 195 DFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPS 254
K + +++ +L G V ++ +++ E A +AV + +S
Sbjct: 241 KM---KNQQCRVNIRLGFNGLVTQVKSL-------GGDKLVCEAALRAVRMADTLPVSKD 290
Query: 255 T--YKSWRNITLFFVPS 269
++ +NI L P
Sbjct: 291 KDVFEKLKNINLTIKPE 307
>gi|300704851|ref|YP_003746454.1| protein tola, inner membrane/periplasmic component of the tol-pal
system [Ralstonia solanacearum CFBP2957]
gi|299072515|emb|CBJ43865.1| protein tolA, inner membrane/periplasmic component of the tol-pal
system [Ralstonia solanacearum CFBP2957]
Length = 333
Score = 48.4 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 26/225 (11%), Positives = 64/225 (28%), Gaps = 7/225 (3%)
Query: 46 NEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSK 105
++ ++ + + + Q + + +E + K + + + + ++
Sbjct: 116 VQERAEAQRQARLKEEQARQTELQRKALAEQQAKEKAAAEAQARKAAQLQAQAEAKAKAE 175
Query: 106 GEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKV 165
E LK A + ++K ++A + ++ +
Sbjct: 176 AEAKLKAKAAADARLRAEAERKATEARSNAARQAQLAHLRAMAGAAGATGSVAGSGGGVG 235
Query: 166 EKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVV 225
S VR +V N + + Q+ G +L +
Sbjct: 236 SGIGTGGTASPGYADRVRAKVKPNIVFDPEAV-SGNPSAVVSVQMAPDGSILSRRLTKSS 294
Query: 226 GGTELVRRMLRENARKAVIKSQAFRLSPSTYKSWRNITLFFVPSK 270
G E +AV +S K+ ++ L F P +
Sbjct: 295 GNG-----AYDEAVLRAVDRSDPLPRDTGG-KAPSSVILTFRPKE 333
>gi|217977009|ref|YP_002361156.1| TonB family protein [Methylocella silvestris BL2]
gi|217502385|gb|ACK49794.1| TonB family protein [Methylocella silvestris BL2]
Length = 291
Score = 48.4 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 17/210 (8%), Positives = 41/210 (19%), Gaps = 6/210 (2%)
Query: 45 YNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSS 104
++ + + A +
Sbjct: 71 QVAPEPEVAAEQPQIEPEPVPQPEPQPESDPEPAPPPEPVPDIAPAPKAEAVLVPPEPAK 130
Query: 105 KGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSK 164
+ E+ P K K + + +
Sbjct: 131 PLIKPKLEAKPKPKPAPKKVAPPPEKPLPKRAEPTHVPRGVTPGRTGASPGQGGQGGGGG 190
Query: 165 VEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDV 224
+ + + +V + N P + + F +++ G + V
Sbjct: 191 GGGGGGSAMSASNWRGLVSAALNRNKRYPPGAQGASG-AATIAFTVDRSGRLASARLVRS 249
Query: 225 VGGTELVRRMLRENARKAVIKSQAFRLSPS 254
G L + A +S F P+
Sbjct: 250 SGSA-----ALDQEAVAIAHRSSPFPPPPA 274
>gi|241766410|ref|ZP_04764287.1| TonB family protein [Acidovorax delafieldii 2AN]
gi|241363407|gb|EER58904.1| TonB family protein [Acidovorax delafieldii 2AN]
Length = 291
Score = 48.4 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 30/231 (12%), Positives = 61/231 (26%), Gaps = 13/231 (5%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
L+ L++S+ LH L + + + V L V + + + +
Sbjct: 13 LQLALSVSIALHAALLSVRFIDPEGFNRVFQDTP--LEVILVNAKSNERPEKAQAIAQAN 70
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
G + + A + +P
Sbjct: 71 MAGGGEASKGRATSPLPYSALTAVGDDFEEAQRRMDALQEQQAQMLTQLRKQIAALPAPD 130
Query: 123 YDKQ----KISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDA 178
K + K + L + + I+ RP K+ + + +
Sbjct: 131 PRKPSQSGSQAAEEEKRRQLVKLLAEIETRINEENARPKKRYISPATREEAYA-----VY 185
Query: 179 IAIVRNRVIANWNIPSDFKRFKKL--RVKMHFQLNQKGFVLGKINVDVVGG 227
+ +R++V + KKL + M +N G VL G
Sbjct: 186 YSALRSKVEDKGTENFPEQGGKKLYGELIMVVTVNHDGRVLATEVAQSSGN 236
>gi|15602833|ref|NP_245905.1| cell envelope integrity inner membrane protein TolA [Pasteurella
multocida subsp. multocida str. Pm70]
gi|12721293|gb|AAK03052.1| TolA [Pasteurella multocida subsp. multocida str. Pm70]
Length = 389
Score = 48.4 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 20/162 (12%), Positives = 53/162 (32%), Gaps = 1/162 (0%)
Query: 5 NGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQF 64
+ + +S+ILH + LL + + E S + + + + + Q
Sbjct: 11 SAVILSVILHAILFGLLILGSLYHRVEIMGGGEGDS-EVMGAVMVDTGAAAQEWGRLQQQ 69
Query: 65 KGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYD 124
K + + V E D+ + + K+ + K ++ ++ + R
Sbjct: 70 KKGQTDKAKKTEPVIEEKPVQPDEQEIIRQQEIEKQKALEKQKEIEQQKEIERQKQLAEQ 129
Query: 125 KQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVE 166
K++ +A + Q + K + + ++
Sbjct: 130 KKQEEQARLAALEKQKQAEEAKAKQLAEAAKLKAEAEAKRLA 171
>gi|57504645|ref|ZP_00370723.1| periplasmic protein Cj0111 [Campylobacter coli RM2228]
gi|57019414|gb|EAL56109.1| periplasmic protein Cj0111 [Campylobacter coli RM2228]
Length = 220
Score = 48.4 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 22/227 (9%), Positives = 69/227 (30%), Gaps = 26/227 (11%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
+++ ++V ++L++F + + + +I + +
Sbjct: 11 SFLLAVAVYVFIIILIFF------RLVTHIQPAIQYTDIQDS------------FIDIEL 52
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLR-----MPV 120
+ +V + S ++ + + + +T + + K S +
Sbjct: 53 MEPSKKVVNEQSAPKDIQKPAQELDIEKLFAQTTNKAVKTEDVDQKASNFNELFGSIKEI 112
Query: 121 SPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIA 180
KI + E + A + +++ + ++K + +
Sbjct: 113 QEEKTTKIQSSAKSETTSSSKTQASELVKQLNDSLLEEESINQGESIKNQKTGIYDEFLG 172
Query: 181 IVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGG 227
V + W + + VK+ +++ G G +V+ G
Sbjct: 173 KVVRTITQRWR--QYHPNSENISVKVKIFIDENGNF-GYTSVEKSGN 216
>gi|212711901|ref|ZP_03320029.1| hypothetical protein PROVALCAL_02976 [Providencia alcalifaciens DSM
30120]
gi|212685423|gb|EEB44951.1| hypothetical protein PROVALCAL_02976 [Providencia alcalifaciens DSM
30120]
Length = 225
Score = 48.4 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 17/179 (9%), Positives = 57/179 (31%), Gaps = 6/179 (3%)
Query: 89 TKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKS 148
+ ++ S++ + + + R PV K + + +D A++
Sbjct: 49 KVSKQRNHQDNASNNVADKTPNEVKSKKRNPVKNKAKPEEKAKKDSSRDDLQTQRAKEGE 108
Query: 149 IDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFK-KLRVKMH 207
+ ++ L+ Q + ++ + ++ P ++ + + +++
Sbjct: 109 SKANSLAAGQQGDLAHFSDGENNINAKQRYLDQIKREIDSHKQYPRRARKMRMQGDIQVQ 168
Query: 208 FQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPSTYKSWRNITLFF 266
F + +KG ++ +D A+ + + P + + F
Sbjct: 169 FDVTEKGELVNTKVLDSEM--SPFFEQAI---LDAIKRCKPLGKPPEDMNRQLKLEINF 222
>gi|167856280|ref|ZP_02479012.1| TobB energy transducing protein [Haemophilus parasuis 29755]
gi|167852604|gb|EDS23886.1| TobB energy transducing protein [Haemophilus parasuis 29755]
Length = 257
Score = 48.4 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 38/268 (14%), Positives = 81/268 (30%), Gaps = 23/268 (8%)
Query: 4 ENGLAISMILHVMFLLLLYFNFNVQLLVPIS-RREMLSVDNIYNEDYHSSKYKKIEEPVV 62
GL S+ LH ++ + Q +P + +S++ +
Sbjct: 7 RIGLIGSLTLHGTLFATVFGIIHTQKPLPATEEVSSISMEML-----------AARLEQE 55
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
Q +++E + + E + ++ K K + K + PV
Sbjct: 56 QVAVAAEEPVEEEVKKPEPVIEPEPIPEPVPEPSKPKEKPKEKPKPKEKPKPKEKPPVKA 115
Query: 123 YDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIV 182
+K +K + + K V P ++ S A +
Sbjct: 116 IEKGAEAKQGVVAKAIPSAVQGAKNQEGIVTGSPKGSGTVNSGSASG---GEINAYKAQL 172
Query: 183 RNRVIANWNIPSDFKRF---KKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENA 239
+ + N + K V + FQL+ G V+ ++ G + L A
Sbjct: 173 QRTLQQRANNAYPQREKMMRKTGTVTLSFQLSSSGQVINVQVINSSGNSN-----LDAAA 227
Query: 240 RKAVIKSQAFRLSPSTYKSWRNITLFFV 267
KA ++ P+ + + + + F
Sbjct: 228 MKAAQSTKMHSPPPAGFPTSLTVPVKFS 255
>gi|83746172|ref|ZP_00943226.1| TolA protein [Ralstonia solanacearum UW551]
gi|83727138|gb|EAP74262.1| TolA protein [Ralstonia solanacearum UW551]
Length = 338
Score = 48.4 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 28/225 (12%), Positives = 65/225 (28%), Gaps = 7/225 (3%)
Query: 46 NEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSK 105
++ ++ + + + Q + + +E + K + + + + ++
Sbjct: 121 VQERAEAQRQARLKEEQARQAELQRKAIAEQQAKEKAAAEAQARKAAQLQAQAEAKAKAE 180
Query: 106 GEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKV 165
E LK A + ++K S+A + ++ +
Sbjct: 181 AEAKLKAKAAADARLKTEAERKASEARSNAARQTQLAHLRAMAGAAGATGSVAGSGGGVG 240
Query: 166 EKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVV 225
S VR +V N + + Q+ G +L +
Sbjct: 241 SGIGTGGTASPGYADRVRAKVKPNIVFDPEAV-SGNPSAVVSVQMAPDGSILSRRLTKSS 299
Query: 226 GGTELVRRMLRENARKAVIKSQAFRLSPSTYKSWRNITLFFVPSK 270
G E +AV +S S K+ ++ L F P +
Sbjct: 300 GNG-----AYDEAVLRAVDRSDPLPRDTSG-KAPSSVILTFRPKE 338
>gi|254477912|ref|ZP_05091297.1| TonB family C-terminal domain protein [Ruegeria sp. R11]
gi|214028497|gb|EEB69333.1| TonB family C-terminal domain protein [Ruegeria sp. R11]
Length = 280
Score = 48.4 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 22/225 (9%), Positives = 50/225 (22%), Gaps = 20/225 (8%)
Query: 42 DNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVR--DFSVQENGDRFSDQ---------TK 90
D + S + Q K Q + + S + DR T
Sbjct: 53 DMVAGTASASPPQLDAKIVTAQEKPLIQPHRPTIANPSARPTVDRTHAVQRLTSRSAGTA 112
Query: 91 THATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSID 150
+ V+P Q + + S +
Sbjct: 113 QTVAARRPSPQQDTAKPAEKVAPQSAVTRVAPKAAQPAPTKPQQSRRGGAQSATAGDTSG 172
Query: 151 TVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQL 210
+ ++ ++ + + V ++ + + F +
Sbjct: 173 RAEAKATRRGQPDATAAQTQGNAAASNYPGQVMRKLARAGKPRVKSRG----VALISFTI 228
Query: 211 NQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPST 255
G + G L + A + V ++ F P+
Sbjct: 229 GANGGLTSVSLSRASGSA-----ALDKAAVQLVRRAGPFPKPPAG 268
>gi|296446769|ref|ZP_06888708.1| TonB family protein [Methylosinus trichosporium OB3b]
gi|296255772|gb|EFH02860.1| TonB family protein [Methylosinus trichosporium OB3b]
Length = 263
Score = 48.4 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 18/233 (7%), Positives = 53/233 (22%), Gaps = 25/233 (10%)
Query: 8 AISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGS 67
+++ LHV + F + + + + + P +
Sbjct: 22 VVALALHVTAIGAALFVAGAEPEDEDTGAPAIEISLAPAAPHVEDAPDAPPGPQADEAAA 81
Query: 68 SQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQK 127
+ + + +++ + ++ + P +
Sbjct: 82 AAPAVASSQT--------------KDSDDPKIARTEAEEADYTHAEKHEKPVEEPTKHEA 127
Query: 128 ISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVI 187
+ + + + + K R ++ +
Sbjct: 128 TPVVSAESAASVAAAPPKSDVAQEAPHAVAPAPGVDKA-----ARAAKLTWQKMLIAHLN 182
Query: 188 ANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENAR 240
+ PS + V + F L++ G V+ G E A
Sbjct: 183 RHKRYPSGA-GRRSAEVAVAFTLDRLGHVVASGVRRSSGD-----HAFDEAAL 229
>gi|70733352|ref|YP_263127.1| ferric siderophore transporter, periplasmic energy transduction
protein TonB [Pseudomonas fluorescens Pf-5]
gi|68347651|gb|AAY95257.1| ferric siderophore transporter, periplasmic energy transduction
protein TonB [Pseudomonas fluorescens Pf-5]
Length = 250
Score = 48.4 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 27/252 (10%), Positives = 60/252 (23%), Gaps = 39/252 (15%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
LA+ + +H + +LL N P+ V + Q
Sbjct: 14 SLAVVLGVHGLAILLA---LNWSKPQPMPIPPQAMVVELAPAPVPPPPAPPKVVTPPQPP 70
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
+E + + + + + + K S
Sbjct: 71 APVEELPLPKLAEAPKPTISVPKPVKQKPKPQPPKPVVKPEPPKEKPSEEKPSDAPVTPA 130
Query: 126 QKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNR 185
K+ + S + + ++
Sbjct: 131 P------------------------------SKQPAPATPGPSPAQAAAKANWQGELQAH 160
Query: 186 VIANWNIPSDF-KRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVI 244
+ PS+ +R K+ + F ++ +G VL V G + L +
Sbjct: 161 LAKYKRYPSEAQRRGKEGTNSLRFVVDAEGKVLSYELVGRSGNAD-----LDRATLDMIR 215
Query: 245 KSQAFRLSPSTY 256
++Q P+
Sbjct: 216 RAQPLPKPPADM 227
>gi|213969190|ref|ZP_03397329.1| tolA protein [Pseudomonas syringae pv. tomato T1]
gi|213926188|gb|EEB59744.1| tolA protein [Pseudomonas syringae pv. tomato T1]
Length = 320
Score = 48.4 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 27/213 (12%), Positives = 59/213 (27%), Gaps = 11/213 (5%)
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
K ++ L + + + + + E K + + +
Sbjct: 113 DAKKVEEKQLADIAKKKAEDEAKKKAEEDAKKAAAEEAKKQAADEAKKKAAEDAKKKAAE 172
Query: 123 YDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIV 182
K+K + + K+ AE K + K + R + ++
Sbjct: 173 DAKKKAAADSAKKAQEAARKSAEDKKAQALADLLSDKPERQQALADERGDETAGSFDDLI 232
Query: 183 RNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKA 242
R R W+ P + + V + + G + G +A A
Sbjct: 233 RVRASEGWSRPPSAR--NNMSVTLQIGMLPDGTIASVSIAKSSGDG-----PFDSSAVAA 285
Query: 243 VIKSQAFR----LSPSTYKSWRNITLFFVPSKM 271
V L P+ + +R+ + F P +
Sbjct: 286 VKNIGRLTEMQGLKPADFAPYRSFKMTFTPGDL 318
>gi|13473122|ref|NP_104689.1| hypothetical protein mll3619 [Mesorhizobium loti MAFF303099]
gi|14023870|dbj|BAB50475.1| mll3619 [Mesorhizobium loti MAFF303099]
Length = 354
Score = 48.4 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 18/172 (10%), Positives = 40/172 (23%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
G+ S+ILHV+ LL + V P + + + +P
Sbjct: 16 GIPASLILHVLVATLLVYGLPVAPQQPREEQPVNVAIVPPPDQPKPKPVPPAPKPPEPKV 75
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
E V E + + + + + + D
Sbjct: 76 EKPPEQKVEKQPPSEKQPKAPPVEVLKPVFQYGDKDTGPRKSLDGASAQDSSPSPAKDDD 135
Query: 126 QKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQD 177
K ++ + ++ + +K + Q
Sbjct: 136 SKPPAVPKPADSQPVTPPDSEQQAASSTEMDKQQAAKQEPDKQAALDDAKQQ 187
>gi|219871517|ref|YP_002475892.1| TobB energy transducing protein [Haemophilus parasuis SH0165]
gi|219691721|gb|ACL32944.1| TobB energy transducing protein [Haemophilus parasuis SH0165]
Length = 257
Score = 48.4 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 38/268 (14%), Positives = 79/268 (29%), Gaps = 23/268 (8%)
Query: 4 ENGLAISMILHVMFLLLLYFNFNVQLLVPIS-RREMLSVDNIYNEDYHSSKYKKIEEPVV 62
GL S+ LH ++ + Q +P + +S++ +
Sbjct: 7 RIGLIGSLTLHGTLFATVFGIIHTQKPLPTTEEVSSISMEML-----------AARLEQE 55
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
Q +++E + + E + + K K + K + PV
Sbjct: 56 QVAVAAEEPVEEEVKKPEPVIEPEPIPEPVPEPPKPKEKPKEKPKPKEKPKPKEKPPVKA 115
Query: 123 YDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIV 182
+K +K + K V P ++ S A +
Sbjct: 116 IEKGAEAKQGVVAKATPSAVQGAKNQEGIVTGSPKGSGTVNSGSASG---GEINAYKAQL 172
Query: 183 RNRVIANWNIPSDFKRF---KKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENA 239
+ + N + K V + FQL+ G V+ ++ G + L A
Sbjct: 173 QRTLQQRANNAYPQREKMMRKTGTVTLSFQLSSSGQVINVQVINSSGNSN-----LDAAA 227
Query: 240 RKAVIKSQAFRLSPSTYKSWRNITLFFV 267
KA ++ P+ + + + + F
Sbjct: 228 MKAAQSTKMHSPPPAGFPTSLTVPVKFS 255
>gi|94268876|ref|ZP_01291309.1| hypothetical protein MldDRAFT_2113 [delta proteobacterium MLMS-1]
gi|93451427|gb|EAT02273.1| hypothetical protein MldDRAFT_2113 [delta proteobacterium MLMS-1]
Length = 253
Score = 48.4 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 20/221 (9%), Positives = 59/221 (26%), Gaps = 6/221 (2%)
Query: 51 SSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQAL 110
++ E + + S + + E + + +
Sbjct: 36 PDPPAEVREIAPRQEVKVAPEPPPPISTRPSRTDADLAELDRIREAARLERDAREAARRA 95
Query: 111 KESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSR 170
+ + + + + + + + S + S
Sbjct: 96 ETARREALEAARENILAQAASRPSPTPRETPSVPPVPAPTPAATDQTAPAAGGPAGGSQT 155
Query: 171 KRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTEL 230
+++ ++ + N + A+W IP LR M + + G V + +
Sbjct: 156 VDAATREYLSRLHNHIQAHWAIPDMPTWDDDLRATMVITIRRDGTVSNTMFEK--RAESM 213
Query: 231 VRRMLRENARKAVIKSQAFR-LSPSTYKSWRNITLFFVPSK 270
L R+ + ++ + + + L F+P +
Sbjct: 214 YFNQL---VRRTIQDAEPMPAFPAALRQRELEVGLNFIPGE 251
>gi|238750868|ref|ZP_04612366.1| TonB domain protein [Yersinia rohdei ATCC 43380]
gi|238711012|gb|EEQ03232.1| TonB domain protein [Yersinia rohdei ATCC 43380]
Length = 228
Score = 48.4 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 25/213 (11%), Positives = 60/213 (28%), Gaps = 10/213 (4%)
Query: 43 NIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSS 102
+ + PVV + E +V Q + +
Sbjct: 4 MVALSAETEFTQISEQRPVVGLAQNLNEPVVEQSESQPEEVDNLLTAPEQSHASLIVDQK 63
Query: 103 SSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELL 162
+ ++ + L + V + + + + + R
Sbjct: 64 TEPPKKKPSKVKLAQSKVIKPRLPVTESMPDNHSEPTPPAVSVSAPLSGDSHRIA----A 119
Query: 163 SKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRF-KKLRVKMHFQLNQKGFVLGKIN 221
+ SS R ++ ++ P ++ ++ + F +NQ G+VL
Sbjct: 120 AANSDSSHLRDIKMSWRGRLQGHLMNFKRYPPGARKKHQQGTPAIRFVVNQDGYVLSAQL 179
Query: 222 VDVVGGTELVRRMLRENARKAVIKSQAFRLSPS 254
V+ R+L A + + ++Q P+
Sbjct: 180 VNSSK-----FRLLDSEALELIKRAQPLPKPPA 207
>gi|301345376|ref|ZP_07226117.1| hypothetical protein AbauAB0_04009 [Acinetobacter baumannii AB056]
Length = 253
Score = 48.0 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 22/203 (10%), Positives = 67/203 (33%), Gaps = 12/203 (5%)
Query: 75 DFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNK 134
+ + + + + +R + + + + + K+ + + ++
Sbjct: 50 SPAPMPSDASTGEAQLETLEKVQQQRELKFEEKVLMTVLSWQKQAEESQRKKALEQLQSQ 109
Query: 135 EQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPS 194
Q + + + +++ + V+ K+ S + R +V N
Sbjct: 110 FQAKAAMVASLEAQYLQRQQDFSRQQKIKTVDGIQAKKDASAAYLDKFREKVELYGNRYY 169
Query: 195 DFKRFKK---LRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRL 251
+ ++ V++ LN +G + ++ G +L E A+ +V + F
Sbjct: 170 PEEAKQQQLKGEVRLMVILNAQGGIRAIRLLESSG-----HPVLDEAAKASVRRGAPFGR 224
Query: 252 SPSTYKSWRNITLF----FVPSK 270
+ K + + F P++
Sbjct: 225 FDANMKDISELRIIRTWRFDPAE 247
>gi|86358550|ref|YP_470442.1| hypothetical protein RHE_CH02948 [Rhizobium etli CFN 42]
gi|86282652|gb|ABC91715.1| hypothetical conserved protein [Rhizobium etli CFN 42]
Length = 373
Score = 48.0 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 23/181 (12%), Positives = 57/181 (31%), Gaps = 3/181 (1%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYK--KIEEP 60
+ G+ +S++LHV + LL F P E ++V+ + + + K + + P
Sbjct: 46 IRWGIGVSVLLHVPVVALLIFGLPKIEPKP-PEDESVNVELVPPPEEKKPEEKKLQEKPP 104
Query: 61 VVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPV 120
+ +++ + + E K + + EQAL A P
Sbjct: 105 APKPPEQAKKQPPPPEAAKPQPSTPIQSISRSVLEFADKDTVPGQKEQALPRQAEAPKPS 164
Query: 121 SPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIA 180
K ++ ++ + + + + ++ + + A
Sbjct: 165 IADLKPAMAPVEPQKPEKPDVPETMPAANPVPQDVELPQVETAETNPEKKGPGAAGIDEA 224
Query: 181 I 181
Sbjct: 225 K 225
>gi|189347062|ref|YP_001943591.1| TonB family protein [Chlorobium limicola DSM 245]
gi|189341209|gb|ACD90612.1| TonB family protein [Chlorobium limicola DSM 245]
Length = 219
Score = 48.0 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 21/169 (12%), Positives = 49/169 (28%), Gaps = 13/169 (7%)
Query: 85 FSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFA 144
+ + + ++ + + +KQ + T
Sbjct: 44 IKTAVASQQEQPCPPEKPLPVKPERPEKVPIKQKTAKSTEKQIPAPLTPAPSSSGDSPPL 103
Query: 145 EKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFK-KLR 203
++ VV P + S ++IVR R+ + P + + +
Sbjct: 104 TRQEFPAVVSSPAIPPQETP-------APQSGKYLSIVRTRIETKKHYPPFSRNLQHEGT 156
Query: 204 VKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLS 252
V ++ + G ++ + G L + A +AV K+ F
Sbjct: 157 VTVNVTIGTSGAIISAAIIRSSG-----YASLDKAALEAVRKAGPFPSP 200
>gi|53715248|ref|YP_101240.1| TonB-like protein [Bacteroides fragilis YCH46]
gi|52218113|dbj|BAD50706.1| TonB-like protein [Bacteroides fragilis YCH46]
Length = 280
Score = 48.0 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 26/251 (10%), Positives = 61/251 (24%), Gaps = 21/251 (8%)
Query: 1 MRLEN-----GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYK 55
M ++ G ++++HV + LL + + P + V + N D Y
Sbjct: 1 MNIKRKSEYIGALGALLVHVAIIALLIL-VSFAIPHPDEEAGGVPV-MMGNVDAAYGNYD 58
Query: 56 KIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESAL 115
V+ + V+ + + + K + A K
Sbjct: 59 PSTMVDVEVLPEEVPAPQPEPEVETEQEMITQTEEETVVVKPKAEPKKEKPKVAKKPEKT 118
Query: 116 LRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPS 175
+ K KA + + + + + + +
Sbjct: 119 PEEKAAEAKKLAEEKAERERKAAAEAASKRVAGAFGKGSQMGGSKGTATSGEGVEGSKDG 178
Query: 176 QDAIAIVRNRVIANWNIPSDFKRF-------------KKLRVKMHFQLNQKGFVLGKINV 222
++ V + ++ RV + +N G V+
Sbjct: 179 NSLTGA-KSGVGGYGTFNLGGRSIGEGGLPRPVYNVQEEGRVVVSITVNPAGHVIATSIN 237
Query: 223 DVVGGTELVRR 233
+ R
Sbjct: 238 RLTNTVNSTLR 248
>gi|83943102|ref|ZP_00955562.1| hypothetical protein EE36_13013 [Sulfitobacter sp. EE-36]
gi|83846110|gb|EAP83987.1| hypothetical protein EE36_13013 [Sulfitobacter sp. EE-36]
Length = 328
Score = 48.0 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 19/231 (8%), Positives = 54/231 (23%), Gaps = 12/231 (5%)
Query: 28 QLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDR--- 84
+ P + + D + + + S + + D
Sbjct: 95 PVTPPEQAQPVTPPDVAAVTPAAPAASAALVPAPLAVPPSESAQVAPPPETLQAQDPDSD 154
Query: 85 FSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFA 144
++ +N + ++ +++ R +K + + +
Sbjct: 155 APVLSRRPMRKNPETAAKIAQARAKQEQAERERRQAEQQAAKKKATQQAAARGNAQRNAT 214
Query: 145 EKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRV 204
+ S + S++ + + V R+ +
Sbjct: 215 KGSSSGQSTSAKSTTTGKRQAAASAQGNAAASNYPGQVMRRISRAGKP----RVRTTGTA 270
Query: 205 KMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPST 255
+ F + G + G L A + K+ F P+
Sbjct: 271 TISFAIASNGGLASVSVARGSGSA-----ALDRAAVSVIRKAAPFPRPPAG 316
>gi|33594233|ref|NP_881877.1| proline-rich inner membrane protein [Bordetella pertussis Tohama I]
gi|33564308|emb|CAE43609.1| Proline-rich inner membrane protein [Bordetella pertussis Tohama I]
gi|332383647|gb|AEE68494.1| proline-rich inner membrane protein [Bordetella pertussis CS]
Length = 324
Score = 48.0 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 24/203 (11%), Positives = 45/203 (22%), Gaps = 11/203 (5%)
Query: 51 SSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQAL 110
+ K QE R + ++ + A E +R +
Sbjct: 115 KEQPDPEIALEEARKKREQEEKARQAAEAAKEKARLEEERRQAELKEKQRLEQERRAAEK 174
Query: 111 KESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSR 170
+ +K+ +A K + + A + P +++
Sbjct: 175 AAAEKAAAEKQAAEKKAKEEAAKKAAADKALRDAFRNDALGAAGIP-----GGTADRNQA 229
Query: 171 KRIPSQDAIAIVRNRVIANWNIPSDFK-RFKKLRVKMHFQLNQKGFVLGKINVDVVGGTE 229
A VR V P + + QL G V G G
Sbjct: 230 GGGRDSGYGAKVRACVQPGVAYPPPPRAGSANPTAQYRVQLGSDGKVNGVTLTSSSGNPG 289
Query: 230 LVRRMLRENARKAVIKSQAFRLS 252
+ + F
Sbjct: 290 -----FDRAVETGIRRCNPFPKP 307
>gi|241766391|ref|ZP_04764271.1| protein TolA [Acidovorax delafieldii 2AN]
gi|241363439|gb|EER58920.1| protein TolA [Acidovorax delafieldii 2AN]
Length = 248
Score = 48.0 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 28/232 (12%), Positives = 67/232 (28%), Gaps = 10/232 (4%)
Query: 39 LSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENET 98
++V+ K ++ + + + +E RD QE +R + +
Sbjct: 27 IAVEREKKRLEQEKKLRQQQLEREKRERERKEEERRDRLEQEKKERLQKEKAEQLKAEQQ 86
Query: 99 KRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDK 158
K + + K+ A + + +++K E +
Sbjct: 87 KAEREKERLEKQKQLAEEKKRQAQEEQRKQEALEKASAKAAEARRQENIRRMQGLAGATG 146
Query: 159 KELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLG 218
E + PS V +V N P R + + G ++G
Sbjct: 147 GEHATGTALRD--SGPSGSYGGRVAAKVRPNIVYPDAVAG--NPRAVVQVRAAPDGTIVG 202
Query: 219 KINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPSTYKSWRNITLFFVPSK 270
+ G + + +A+ K+++ + ++ + F P
Sbjct: 203 TKLIQSSGN-----KAWDDAVLRALDKTESLPRDVDG-RVPSSLEIGFRPQD 248
>gi|162452050|ref|YP_001614417.1| hypothetical protein sce3777 [Sorangium cellulosum 'So ce 56']
gi|161162632|emb|CAN93937.1| hypothetical secreted protein [Sorangium cellulosum 'So ce 56']
Length = 462
Score = 48.0 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 17/98 (17%), Positives = 31/98 (31%), Gaps = 9/98 (9%)
Query: 167 KSSRKRIPSQDAIAIVRNRVIANWN--IPSDFKRFK-KLRVKMHFQLNQKGFVLGKINVD 223
+ + V ++ W P + V + F + G V
Sbjct: 349 DNDPLDRRRSHYMRQVMAKLHPLWADAFPKWAAGEGLQGTVIVTFVIRADGTVGSASVTR 408
Query: 224 VVGGTELVRRMLRENARKAVIKSQAF-RLSPSTYKSWR 260
G E EN R+AV++ + + P +S+R
Sbjct: 409 PSGIPE-----FDENCRRAVLRGSPYPPVPPELGESFR 441
>gi|154250640|ref|YP_001411464.1| TonB family protein [Parvibaculum lavamentivorans DS-1]
gi|154154590|gb|ABS61807.1| TonB family protein [Parvibaculum lavamentivorans DS-1]
Length = 267
Score = 48.0 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 24/243 (9%), Positives = 58/243 (23%), Gaps = 31/243 (12%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQ-LLVPISRREMLSVDNIYNEDYHSSKYKKIEEPV 61
L +A+S++LH + + P + SV + + +
Sbjct: 28 LRRPVAVSLLLHAAIFTGALAWWQGEGAPAPKGHPDGFSVTLVNFSE-----PAPKAPQI 82
Query: 62 VQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVS 121
+ + E E + + E + + L+ +
Sbjct: 83 QAKPVVAPAQPEVKPQPKP---VVKPAVVERKVEPEPQITPDVTPEISAAAAEPLQAAEA 139
Query: 122 PYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAI 181
+ + D +G A+ + R + + A +
Sbjct: 140 AAQPVQTASLAPSVSDGRGQGAAKGFEDTQGRESDKVFLTEPRFRSPPRPPVYPRRARDL 199
Query: 182 VRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARK 241
++ + +L+ G + G +L + A
Sbjct: 200 -----------------EQEGEALIRVRLDPSGNAAEVLVWKSSG-----FALLDKAALT 237
Query: 242 AVI 244
AV
Sbjct: 238 AVR 240
>gi|187922765|ref|YP_001894407.1| protein TolA [Burkholderia phytofirmans PsJN]
gi|187713959|gb|ACD15183.1| protein TolA [Burkholderia phytofirmans PsJN]
Length = 344
Score = 48.0 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 14/74 (18%), Positives = 22/74 (29%), Gaps = 8/74 (10%)
Query: 178 AIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRE 237
VR V N S L + + + G +LG G +
Sbjct: 261 YADKVRRAVRPN---ISWGGETSGLETVVSVRCSPTGTLLGATISRSSGNA-----AWDD 312
Query: 238 NARKAVIKSQAFRL 251
A +AV ++ L
Sbjct: 313 AALRAVQRTDPMPL 326
>gi|113970704|ref|YP_734497.1| TolA family protein [Shewanella sp. MR-4]
gi|113885388|gb|ABI39440.1| TolA family protein [Shewanella sp. MR-4]
Length = 340
Score = 48.0 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 23/223 (10%), Positives = 70/223 (31%), Gaps = 12/223 (5%)
Query: 49 YHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQ 108
+ +K ++ K QE + + + Q+ ++ + A ++ ++ +
Sbjct: 126 KQQQEKEKAQKAEADRKQKEQERKLAEDAAQKAAEKRKVEEAAAAKAEADRKQKEAEAKA 185
Query: 109 ALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKS 168
+ A + + + + A + + ++ +
Sbjct: 186 KAEAEAKAKAEAKAKADAEAKAKAEAKAKADAEAKARAQQEQEMADALAAEQAALSQTMN 245
Query: 169 SRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGT 228
+ + A++++ + N + + + +L GFV+ T
Sbjct: 246 KQMQTEVGKYTAMIKSTIQRNLVVDESMRGK---TCTVSVRLANDGFVI-------SSQT 295
Query: 229 ELVRRMLRENARKAVIKSQAFRLSPST--YKSWRNITLFFVPS 269
+ + + A++K+ +SP Y + I L P+
Sbjct: 296 QGGDPNVCRATKAAILKAGKLPVSPDPAVYNLMKEINLIVEPT 338
>gi|302036396|ref|YP_003796718.1| putative protein TonB [Candidatus Nitrospira defluvii]
gi|300604460|emb|CBK40792.1| putative Protein TonB [Candidatus Nitrospira defluvii]
Length = 320
Score = 48.0 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 29/290 (10%), Positives = 71/290 (24%), Gaps = 51/290 (17%)
Query: 5 NGLAISMILHVMFLLLLYF------------NFNVQLLVPISRREMLSVDNIYNEDYHSS 52
+G IS+ LH +LL +F + V +S+
Sbjct: 18 SGWIISLGLHGSAILLAGLFVARIGLAPPSSSFQWDVTVVVSQPPATPA---QVAPGSPP 74
Query: 53 KYKKIEEPVVQFKGSSQENLVR------------------------DFSVQENGDRFSDQ 88
I P + ++ + ++ +
Sbjct: 75 PVAAIIRPAQRNTSATALRPTPSQSTLSTMPATTSSFPATAERDTIEPALTPPQQAPAQP 134
Query: 89 TKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKS 148
+ + +K + A + +P D + + + N ++ +
Sbjct: 135 LERTPAVSSPPEPQETKDDLQPSLHATSAVIEAPPDPRSLPQMANPTLADAPLAPDMSGT 194
Query: 149 IDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAI------VRNRVIANWNIPSDFK-RFKK 201
+ P + S + R+ A P + +
Sbjct: 195 TSQSLSEPATSPAQTAALSPSTSTTQVARKPDYGWLAGPLLQRIEALKQYPVTARLHRLE 254
Query: 202 LRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRL 251
RV + + + G + G +L + A + + ++ L
Sbjct: 255 GRVIVRIVIQENGHITSATIAKTSG-----HEVLDQAALETIRQASPLTL 299
>gi|239813943|ref|YP_002942853.1| TonB family protein [Variovorax paradoxus S110]
gi|239800520|gb|ACS17587.1| TonB family protein [Variovorax paradoxus S110]
Length = 283
Score = 48.0 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 37/239 (15%), Positives = 76/239 (31%), Gaps = 14/239 (5%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRR-EMLSVDNIYNEDYHSSKYKKIEEPV 61
L+ L +S+I H L + + + V E++ V++ N+ ++
Sbjct: 9 LQIALGVSVIAHAALLAVRFVDPESFNRVFSETPLEVILVNSKTNDK--PDARARVMAQT 66
Query: 62 VQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVS 121
G E + + + A + A + L MP
Sbjct: 67 SLAGGGDLERGRATSPLPPSSFTAVGDSIEEARRQVEAMQAQQMQLLAQLKRELAAMPAP 126
Query: 122 PY----DKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQD 177
D ++ K + + + ++ ++ RP K+ L +++
Sbjct: 127 DPRASGDPKEAVAREEKRRQMVELLAEIERRVNEENARPKKRYLSPSTREAAYAI----- 181
Query: 178 AIAIVRNRVIANWNIPSDFKRFKKL--RVKMHFQLNQKGFVLGKINVDVVGGTELVRRM 234
+ +R R+ KKL +KM +N G +L + + G L RR
Sbjct: 182 YVDTLRRRIEVRGTENFPTAAGKKLYGELKMTITINHDGKILDTVVDESSGDVVLDRRA 240
>gi|114330516|ref|YP_746738.1| TonB family protein [Nitrosomonas eutropha C91]
gi|114307530|gb|ABI58773.1| TonB family protein [Nitrosomonas eutropha C91]
Length = 276
Score = 48.0 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 21/246 (8%), Positives = 64/246 (26%), Gaps = 20/246 (8%)
Query: 17 FLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDF 76
++ + N + + V + ++ K+ G + +
Sbjct: 1 MAIVAGISLNPSAQKHTKITKSIDVVLVNSKSQTKPVDTKVFAQTNLDGGGNVAEDRQAK 60
Query: 77 SVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQ 136
+ T +TK+ S + + + + + Q
Sbjct: 61 TPLPVLPGVKPMTDLTVAAQKTKQLESKIKKLLTVAESKAHVTQPLPQAKPEQDKPKQNQ 120
Query: 137 DLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPS------------QDAIAIVRN 184
+ + + + ++K ++ +KR + R
Sbjct: 121 PAAINPDSYSDLLQRSLEIARLEAQIAKDHEAYQKRPKRRFIGARTREYRFARYLEDWRL 180
Query: 185 RVIANWNIPSDFKRFKK---LRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARK 241
+V N+ + +K +++ + G + G ++L + A +
Sbjct: 181 KVERIGNLNYPEEARRKKLYGSLQLTVGVRSDGSLESIGIDRSSGT-----QILDDAAIR 235
Query: 242 AVIKSQ 247
V +
Sbjct: 236 IVRLAA 241
>gi|288962269|ref|YP_003452564.1| tonB protein [Azospirillum sp. B510]
gi|288914535|dbj|BAI76020.1| tonB protein [Azospirillum sp. B510]
Length = 299
Score = 48.0 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 24/252 (9%), Positives = 58/252 (23%), Gaps = 9/252 (3%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIE--EPVVQ 63
LA+++ +H + ++V ++ + + +D I+ P
Sbjct: 36 SLALALGVHAA-AGVAMVAWHVPVMPADADPPAVLLDLAPLPTPQPEPAPAIDIPVPQPV 94
Query: 64 FKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPY 123
+ + + +Q +
Sbjct: 95 PEPMPEPVTEPPPPEPPPPEPVVEQPPPPPEPPPVVEPEVVLPKPPPDPPKPKPEVKKEA 154
Query: 124 DKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVR 183
K K ++ + V + V
Sbjct: 155 PPPKPEKPKPEKPKPPRPVAQPVQQAQPAPVAAPPAPAAPAPAAPAAASRAMPSWQGRVL 214
Query: 184 NRVIANWNIPSDF-KRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKA 242
+ N P R ++ ++ F ++++G VL G L E +
Sbjct: 215 GHLERNKRYPRSAQARRQEGVAQVRFTVDREGRVLSVQLDRSSG-----VAALDEETVEM 269
Query: 243 VIKSQAFRLSPS 254
V ++ P
Sbjct: 270 VRRASPLPAPPE 281
>gi|39935669|ref|NP_947945.1| hypothetical protein RPA2603 [Rhodopseudomonas palustris CGA009]
gi|192291251|ref|YP_001991856.1| hypothetical protein Rpal_2873 [Rhodopseudomonas palustris TIE-1]
gi|39649522|emb|CAE28044.1| conserved hypothetical protein [Rhodopseudomonas palustris CGA009]
gi|192285000|gb|ACF01381.1| conserved hypothetical protein [Rhodopseudomonas palustris TIE-1]
Length = 147
Score = 48.0 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 15/107 (14%), Positives = 34/107 (31%), Gaps = 4/107 (3%)
Query: 165 VEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDV 224
+ + + D + + + + W P +++ + + G +LGK +
Sbjct: 21 TVRPASAQNAPIDNLNALFSAMKQCWRSPRLPAGNPGMQITVLVSFTRSGEILGKPRITF 80
Query: 225 VGGTELVRRMLR--ENARKAVIKSQAFRLSPS--TYKSWRNITLFFV 267
L +A+ + +PS + R TL F
Sbjct: 81 ESPEAGRDDSLAYRVAVMEALQRCTPLPFTPSMGGAVAGRPFTLRFD 127
>gi|15966178|ref|NP_386531.1| hypothetical protein SMc01515 [Sinorhizobium meliloti 1021]
gi|307308529|ref|ZP_07588231.1| TonB family protein [Sinorhizobium meliloti BL225C]
gi|307317307|ref|ZP_07596747.1| TonB family protein [Sinorhizobium meliloti AK83]
gi|15075448|emb|CAC47004.1| Hypothetical protein signal peptide [Sinorhizobium meliloti 1021]
gi|306896896|gb|EFN27642.1| TonB family protein [Sinorhizobium meliloti AK83]
gi|306900929|gb|EFN31538.1| TonB family protein [Sinorhizobium meliloti BL225C]
Length = 308
Score = 48.0 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 32/236 (13%), Positives = 63/236 (26%), Gaps = 11/236 (4%)
Query: 26 NVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQEN-----LVRDFSVQE 80
V + E+ ++ E+ + EPV Q L +
Sbjct: 62 EVVEPAEETPEELKPTESEPTEEVVEAVEPVPTEPVSQEPSEMTPTEADVILPAEEMPAS 121
Query: 81 NGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQG 140
+ E + E E + P K+K+ + E Q
Sbjct: 122 QVEESDVIASIAPVETVIPQERPDPEEVLKPEVEKVEPKKEPAKKKKVVRKKAGEGGTQA 181
Query: 141 ISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFK 200
S + K+ S+ + VR ++ P++ +R
Sbjct: 182 KSQKKGKADGAETATAAAATGESRGASREIGNAAVSNYPGKVRRKLTRAIRYPAEARRQG 241
Query: 201 -KLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPST 255
+ + F + G V G +L + A + V ++ F P+
Sbjct: 242 LRGVAHVSFTVTSGGGVARVGITKSAGS-----PVLDQAALETVRRAAPFPAIPAG 292
>gi|120599220|ref|YP_963794.1| TolA family protein [Shewanella sp. W3-18-1]
gi|146292706|ref|YP_001183130.1| TolA family protein [Shewanella putrefaciens CN-32]
gi|120559313|gb|ABM25240.1| TolA family protein [Shewanella sp. W3-18-1]
gi|145564396|gb|ABP75331.1| TolA family protein [Shewanella putrefaciens CN-32]
Length = 329
Score = 48.0 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 25/231 (10%), Positives = 77/231 (33%), Gaps = 13/231 (5%)
Query: 42 DNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRS 101
E +++ K+ + Q + + D ++E + +++ A E
Sbjct: 107 KLQEIETQKANEAAKVAQVKQQQEKEKAQKAEADRKLKEQERKVAEEAAQKAAEKRKAEE 166
Query: 102 SSSKGEQALKESALLRMPVSPYDKQ-KISKATNKEQDLQGISFAEKKSIDTVVVRPDKKE 160
+++ + ++ + K+ + +++ + A + + ++
Sbjct: 167 AAAAKAETERKQKEEAERKKKEEADRKLKEEAERKRKADAEAKARAQQEQEMADALAAEQ 226
Query: 161 LLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKI 220
+ + + A++++ + N + + K+ +L GFV+
Sbjct: 227 AALSQTMNKQMQSEVGKYTAMIKSTIQRNLVVDESMRGK---SCKVSVRLANDGFVI--- 280
Query: 221 NVDVVGGTELVRRMLRENARKAVIKSQAFRLSPST--YKSWRNITLFFVPS 269
T+ + + A++K+ +SP Y + I L P+
Sbjct: 281 ----SSQTDGGDANVCRATKAAILKAGKLPVSPDPAVYNLMKEINLIVEPT 327
>gi|332530157|ref|ZP_08406106.1| TonB-like protein [Hylemonella gracilis ATCC 19624]
gi|332040427|gb|EGI76804.1| TonB-like protein [Hylemonella gracilis ATCC 19624]
Length = 303
Score = 48.0 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 21/180 (11%), Positives = 56/180 (31%), Gaps = 19/180 (10%)
Query: 97 ETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRP 156
E K + ++ +E ++ ++K + + + +++I +
Sbjct: 137 ERKARLEREQKEKQREQKERERKLAEEKRRKEEAERREREATELREQMRQENIRRMAGLA 196
Query: 157 DKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFV 216
+ + +++R PS +R R+ N P + + ++ G +
Sbjct: 197 EATPQPNAAGQATRTAGPSATYAGRIRARIKPNIVFPDNL-GNTSISAEVKVTTAPDGAI 255
Query: 217 LGKINVDVVGGTELVRRMLRENARKAVIKSQAFR------LSPSTYKSWRNITLFFVPSK 270
+ G R+ E +A+ K+ + P + + F P
Sbjct: 256 TDRTLTKSSGN-----RLWDEAVLRAIDKTAILPKDTDGKVPP-------VLIISFTPKD 303
>gi|312963868|ref|ZP_07778339.1| hypothetical protein PFWH6_5787 [Pseudomonas fluorescens WH6]
gi|311281903|gb|EFQ60513.1| hypothetical protein PFWH6_5787 [Pseudomonas fluorescens WH6]
Length = 250
Score = 48.0 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 23/254 (9%), Positives = 54/254 (21%), Gaps = 37/254 (14%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPV 61
R LA+ + +H + + + + + V ++
Sbjct: 10 RYGTSLAVVLGVHAVAIAIA---LHWSAPRTVQLPPAAMVIDLAPMPAPPPPAPPXXXXX 66
Query: 62 VQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVS 121
+ E L + K + KE P
Sbjct: 67 XXXPPAPVEELPLPKLAEAPKPTIQVPKPVKPKPKPQPPKPVEKKIEPPKEKPSEEPPSD 126
Query: 122 PYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAI 181
++ + + K+
Sbjct: 127 APPTPAPAEKSAQPVPGPSPQQIAAKAS----------------------------WEGA 158
Query: 182 VRNRVIANWNIPSDFKRF-KKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENAR 240
+ + P + K+ ++ F ++ G VL V G + L
Sbjct: 159 LLAHLQKYKKYPPGAQASGKEGLNRLKFIVDADGNVLSYELVGRSGNAD-----LDRATL 213
Query: 241 KAVIKSQAFRLSPS 254
+ ++Q P+
Sbjct: 214 DMIRRAQPLPKPPA 227
>gi|158301823|ref|XP_321463.4| AGAP001633-PA [Anopheles gambiae str. PEST]
gi|157012658|gb|EAA00967.4| AGAP001633-PA [Anopheles gambiae str. PEST]
Length = 8655
Score = 48.0 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 17/160 (10%), Positives = 50/160 (31%), Gaps = 3/160 (1%)
Query: 64 FKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPY 123
K +E + + D+ + + + K+ + E ++E + V
Sbjct: 891 AKKVDEEKAEEEKVQLKKVDKQDLDKQAEEEKVKLKKVERKETELKVEEQKVQLKKVERK 950
Query: 124 DKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVR 183
+ + + E AE K V + S+ + +K +
Sbjct: 951 EGELKVEEKKAELKKVERKEAELKIEGEKVELKKVERRASEAKVEEKKVELKKVEQP--- 1007
Query: 184 NRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVD 223
++ + K+ ++++ + +++G + V
Sbjct: 1008 EKIEIKVEEAKKVETKKEEKIQIKVEEDRRGSIPKIKEVT 1047
>gi|29349329|ref|NP_812832.1| hypothetical protein BT_3921 [Bacteroides thetaiotaomicron
VPI-5482]
gi|253570324|ref|ZP_04847733.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
gi|298384862|ref|ZP_06994421.1| TonB exported protein [Bacteroides sp. 1_1_14]
gi|29341237|gb|AAO79026.1| putative TonB exported protein [Bacteroides thetaiotaomicron
VPI-5482]
gi|251840705|gb|EES68787.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
gi|298262006|gb|EFI04871.1| TonB exported protein [Bacteroides sp. 1_1_14]
Length = 292
Score = 48.0 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 29/250 (11%), Positives = 68/250 (27%), Gaps = 23/250 (9%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVP-------------------ISRREMLSVDNIYN 46
G ++++HV + LL + + P ++ VD +
Sbjct: 12 GALGALLVHVAVIALLIL-VSFTVPQPDEDAGGVPVMLGNVESARGFDDPSLVDVDILPE 70
Query: 47 EDYHSSKYKKIEE-PVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSK 105
E + + E P Q + E + + + + K E +
Sbjct: 71 EPEAPAPAETQPELPSEQDLLTQTEEETVVLKPKTEPKKETVKPKEVVKPKEPVKKPEKT 130
Query: 106 GEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKV 165
+ E+ L + +++ +A K+ A+ E
Sbjct: 131 EAEKAAEAKRLAEEKAERERKAAEEAAKKKVANAFGKGAQMGGSKGTSASGTGTEGSKDG 190
Query: 166 EKSSRKRIPSQDA--IAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVD 223
S+ + + + + + ++ RV ++ +N G V+G
Sbjct: 191 NSSTGAKTGTGGYGTFDLGGRSLGTGSLPKPAYNVPEEGRVVVNITVNPAGVVIGTSINP 250
Query: 224 VVGGTELVRR 233
R
Sbjct: 251 QTNTVNSTLR 260
>gi|296447899|ref|ZP_06889809.1| TonB family protein [Methylosinus trichosporium OB3b]
gi|296254585|gb|EFH01702.1| TonB family protein [Methylosinus trichosporium OB3b]
Length = 236
Score = 48.0 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 18/178 (10%), Positives = 47/178 (26%), Gaps = 3/178 (1%)
Query: 76 FSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKE 135
+ TE T + + + + ++ +I++A +
Sbjct: 48 EAALPLVFDLEGALSDSETEEATAQDTKADAQPPKDVASPKEPTPEQNADGEIAQAAKQA 107
Query: 136 QDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSD 195
D + + V + ++ + + + P + R+
Sbjct: 108 TDTPPQTKKAETGERDVKGEEEDRKAQTSAKHEKQDDDPVNLYAKQLAKRIRRLAYAAKA 167
Query: 196 FKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSP 253
+ + F + G ++ + G L +A K V + F P
Sbjct: 168 HAAGLRGSATVAFTIAASGQIVPSSLRIIAGSGHP---QLDADAMKTVRAASPFPPPP 222
>gi|56681399|gb|AAW21310.1| TonB2 [Actinobacillus suis]
gi|56681403|gb|AAW21313.1| TonB2 [Actinobacillus suis]
Length = 281
Score = 48.0 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 28/279 (10%), Positives = 69/279 (24%), Gaps = 21/279 (7%)
Query: 4 ENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQ 63
GL S+++H ++S++ + E+P
Sbjct: 7 RIGLISSIVIHTFVFAGFISIVKSSHSDGQPEDNVMSMELVAALLEQPQVAVAEEQPTQA 66
Query: 64 FKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPY 123
Q + + + + + K K ++ K
Sbjct: 67 EPEKQQAEPEPEPEAEPIPEPKPQPKPKEKPKEKPKPKEQPKPKEKEKPKKEKAKDKPIK 126
Query: 124 DKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPS-------- 175
+K +A + + + + + + +
Sbjct: 127 ALEKGPEAKQGIVAKAIPNAVQGTQARAGIPNGKPNGNPNGTSANGSQNGAAGGSGSGSN 186
Query: 176 ----QDAIAIVRNRVIANWNIPSDFKRF---KKLRVKMHFQLNQKGFVLGKINVDVVGGT 228
A ++ + N + K V + F ++ G + ++ G +
Sbjct: 187 GSEIGAYKAALQRALQRRANNAYPAREKMMRKTGVVTIGFTVSSSGDLTNVKVLNSSGNS 246
Query: 229 ELVRRMLRENARKAVIKSQAFRLSPSTYKSWRNITLFFV 267
L A KA +S P+ + S + + F
Sbjct: 247 N-----LDNAAVKA-AQSTKVSPPPAGFPSSVTVPVKFS 279
>gi|84499347|ref|ZP_00997635.1| hypothetical protein OB2597_05450 [Oceanicola batsensis HTCC2597]
gi|84392491|gb|EAQ04702.1| hypothetical protein OB2597_05450 [Oceanicola batsensis HTCC2597]
Length = 368
Score = 48.0 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 25/218 (11%), Positives = 58/218 (26%), Gaps = 9/218 (4%)
Query: 38 MLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENE 97
L+ D + + E V + Q + + R + + T +
Sbjct: 148 PLAASQAEATDRAEATPEAPAESVQPAQAPVQSAALAPRPEPLSATRAAPAERITGTTRD 207
Query: 98 TKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPD 157
T SK ES P + ++ T + + + + +
Sbjct: 208 TTAPPVSKRPARRPESLETAEPRPAPKPARPARQTAQPSAPGNAAQNARAGQASGQEQAQ 267
Query: 158 KKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVL 217
+ S + + +V ++ + + F + G +
Sbjct: 268 ARSSGSGGRAQEAGNAAASNYPGLVMRKLSRARKPNIRTRG----TATVAFSIAANGRLS 323
Query: 218 GKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPST 255
G + G + + + A + V + F PS
Sbjct: 324 GARILSSSGSSR-----VDQAALQVVRSAAPFPRPPSG 356
>gi|306824570|ref|ZP_07457916.1| endo-beta-N-acetylglucosaminidase D [Streptococcus sp. oral taxon
071 str. 73H25AP]
gi|304433357|gb|EFM36327.1| endo-beta-N-acetylglucosaminidase D [Streptococcus sp. oral taxon
071 str. 73H25AP]
Length = 1576
Score = 48.0 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 17/177 (9%), Positives = 34/177 (19%), Gaps = 10/177 (5%)
Query: 29 LLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQ 88
PIS D + ++ E Q + V E
Sbjct: 79 AEQPISENPPAITDLVNEKEEAKPAPADKAEKPAQPTDKEEVKSEEAPQVAEKKANKPTL 138
Query: 89 TKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKS 148
E ++ R K + N+ +
Sbjct: 139 ADVPKNEEKSLRPKEIKFDTWEDLLKWEPGAREDDP-------INRSSVELAKRHRGQLV 191
Query: 149 IDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVK 205
+ R + L + K+ + + W ++ L
Sbjct: 192 NEKASRRAKVQALANTNSKAKDHASVGGEE---FKAYAFDYWQYLDSMVFWEGLVPT 245
>gi|99080659|ref|YP_612813.1| hypothetical protein TM1040_0818 [Ruegeria sp. TM1040]
gi|99036939|gb|ABF63551.1| hypothetical protein TM1040_0818 [Ruegeria sp. TM1040]
Length = 147
Score = 48.0 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 14/80 (17%), Positives = 27/80 (33%), Gaps = 2/80 (2%)
Query: 169 SRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVL--GKINVDVVG 226
+ + + + V WN + + + F + Q G V V
Sbjct: 31 APSNALGAPKLDELGSDVSLCWNDEALSDDAARATTTVEFHVGQDGLVDLNTIKIVSSTA 90
Query: 227 GTELVRRMLRENARKAVIKS 246
T+ + E AR+A+I+
Sbjct: 91 ITQTASKQAFEAARRAIIRC 110
>gi|171059624|ref|YP_001791973.1| protein TolA [Leptothrix cholodnii SP-6]
gi|170777069|gb|ACB35208.1| protein TolA [Leptothrix cholodnii SP-6]
Length = 338
Score = 47.6 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 17/165 (10%), Positives = 47/165 (28%), Gaps = 21/165 (12%)
Query: 112 ESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDK-KELLSKVEKSSR 170
+ + K + + + + ++ + P +++
Sbjct: 186 KKEAEAKDRAEAAKDARAAKAQADALAKQRADNLRRLNQQLGNNPAVGNATTPSAGTAAQ 245
Query: 171 KRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTEL 230
PS +R R++ N ++ ++ G +LG + G E
Sbjct: 246 SAAPSAGYEGRIRARILPNIVFTGRISGPT--VAEVEVRVAPDGTILGSRLLKSSGLAEW 303
Query: 231 VRRMLRENARKAVIKSQAFR------LSPSTYKSWRNITLFFVPS 269
+ +A+ +++ + P + L F P+
Sbjct: 304 -----DQAVLRAIERTEILPRDIDGRVPP-------LMVLSFDPN 336
>gi|316934202|ref|YP_004109184.1| hypothetical protein Rpdx1_2868 [Rhodopseudomonas palustris DX-1]
gi|315601916|gb|ADU44451.1| hypothetical protein Rpdx1_2868 [Rhodopseudomonas palustris DX-1]
Length = 147
Score = 47.6 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 15/107 (14%), Positives = 34/107 (31%), Gaps = 4/107 (3%)
Query: 165 VEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDV 224
+ + + D + + + W+ P +++ + + G +LGK +
Sbjct: 21 TVRPALAQDAPIDNLDALFFAMKQCWHPPRLPPGHPGMQITVLVSFKRNGEILGKPRITF 80
Query: 225 VGGTELVRRMLR--ENARKAVIKSQAFRLSPS--TYKSWRNITLFFV 267
L +A+ + +PS + R TL F
Sbjct: 81 ESPEAGRDDSLAYRVAVMEALQRCTPLPFTPSMGGAVAGRPFTLRFD 127
>gi|33413750|gb|AAN11323.1| cardiac titin [Canis lupus familiaris]
Length = 3950
Score = 47.6 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 6/156 (3%), Positives = 34/156 (21%), Gaps = 2/156 (1%)
Query: 25 FNVQLLVPISRREMLSVDNIYNEDYHSS--KYKKIEEPVVQFKGSSQENLVRDFSVQENG 82
+ + + E K + V + + +
Sbjct: 3625 VPTPVPKKVEAPPAKVPKKVPEEKVPVPVQKKEPPPAKVPEAPKEVVPEKKVPAAPPKKP 3684
Query: 83 DRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGIS 142
+ + ++ + ++ + + + ++ +
Sbjct: 3685 EVPPAKVPEVPKAAVPEKKVPEVIPPKPESPPPPVPGAEKKVRKLLPEPKPQPKEEVVLK 3744
Query: 143 FAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDA 178
+K + + + K+L + + +
Sbjct: 3745 SVLRKRPEEGEPKVEPKKLEKIKKPVPEPPPKAVEE 3780
Score = 41.4 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 5/88 (5%), Positives = 16/88 (18%), Gaps = 1/88 (1%)
Query: 57 IEEPVVQFKGSSQENLVRDFSVQEN-GDRFSDQTKTHATENETKRSSSSKGEQALKESAL 115
+ ++ V + + K + K K+
Sbjct: 3619 KKAVPEVPTPVPKKVEAPPAKVPKKVPEEKVPVPVQKKEPPPAKVPEAPKEVVPEKKVPA 3678
Query: 116 LRMPVSPYDKQKISKATNKEQDLQGISF 143
K+ + + +
Sbjct: 3679 APPKKPEVPPAKVPEVPKAAVPEKKVPE 3706
>gi|58584527|ref|YP_198100.1| hypothetical protein Wbm0269 [Wolbachia endosymbiont strain TRS of
Brugia malayi]
gi|58418843|gb|AAW70858.1| Predicted protein [Wolbachia endosymbiont strain TRS of Brugia
malayi]
Length = 82
Score = 47.6 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 15/87 (17%), Positives = 31/87 (35%), Gaps = 14/87 (16%)
Query: 179 IAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVG-GTELVRRMLRE 237
+ ++RN++ WN P + +K++ L+ +G ++ D + R +
Sbjct: 1 MTLLRNKLTKYWNFPESIAYKENFSIKINLLLSNQGEIIMADVADSSSYKNNPLFRSI-- 58
Query: 238 NARKAV------IKSQAF-RLSPSTYK 257
A+ IK L Y
Sbjct: 59 ----AITQCVQHIKCSPITDLPIEYYH 81
>gi|293391037|ref|ZP_06635371.1| protein TonB [Aggregatibacter actinomycetemcomitans D7S-1]
gi|290951571|gb|EFE01690.1| protein TonB [Aggregatibacter actinomycetemcomitans D7S-1]
Length = 252
Score = 47.6 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 28/244 (11%), Positives = 71/244 (29%), Gaps = 23/244 (9%)
Query: 13 LHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENL 72
+H + + LL+ + V + ++E +
Sbjct: 17 IHAVIVYLLF----WSHVKKSDFSANSVVGELSTSISMEMLMAQVEA---------EPPP 63
Query: 73 VRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKAT 132
V + + + D + ++ + + + P ++ +
Sbjct: 64 VEEKAPEPEKQETVDDPTVKPEPPKVEKPKEPEKPKEKPKEKPKEKPKEKPKQKPRTDVP 123
Query: 133 NKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNI 192
++ + + K+ T V + L S + ++ +R + +
Sbjct: 124 VGDKTVDSNASVNSKATSTGPVTTNNPNLAGSGASSDERNA----YLSAIRREIEKHKRY 179
Query: 193 PSDFK-RFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRL 251
P+ K K+ V + F + G + G V G + L A AV +++
Sbjct: 180 PTRAKMMRKQGIVTVSFAIGADGSISGASIVKSSGAED-----LDNAALSAVNSARSIGP 234
Query: 252 SPST 255
P+
Sbjct: 235 RPAG 238
>gi|229593366|ref|YP_002875485.1| hypothetical protein PFLU6001 [Pseudomonas fluorescens SBW25]
gi|229365232|emb|CAY53536.1| putative exported protein [Pseudomonas fluorescens SBW25]
Length = 249
Score = 47.6 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 26/265 (9%), Positives = 64/265 (24%), Gaps = 38/265 (14%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPV 61
R LA+ + +H + + + + + V ++
Sbjct: 10 RYGTSLAVVLGVHAIAIAIA---LHWSAPRTVQLPPAAMVIDLAPMPAPPPPAPPKVVTP 66
Query: 62 VQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVS 121
Q +E + + + + + + K E ++ + +
Sbjct: 67 PQPPAPVEELPLPKLAEAPKPTIQVPKPVKPKPKPQPPKPVEKKIEPPKEKPSEDPPSDA 126
Query: 122 PYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAI 181
P P +K S ++
Sbjct: 127 PP-----------------------------TQAPAEKSAQPVPGPSPQQIAAKASWEGT 157
Query: 182 VRNRVIANWNIPSDF-KRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENAR 240
+ + P R K+ ++ F ++ G VL V G + L
Sbjct: 158 LLAHLQKYKKYPPGAQARGKEGLNRLKFVVDADGNVLSYELVGRSGNAD-----LDRATL 212
Query: 241 KAVIKSQAFRLSPSTYKSWRNITLF 265
+ ++Q P+ +I +
Sbjct: 213 DMIRRAQPLPKPPADMLKGGSIEIV 237
>gi|107100427|ref|ZP_01364345.1| hypothetical protein PaerPA_01001452 [Pseudomonas aeruginosa PACS2]
gi|218893058|ref|YP_002441927.1| TolA protein [Pseudomonas aeruginosa LESB58]
gi|254239319|ref|ZP_04932642.1| TolA protein [Pseudomonas aeruginosa C3719]
gi|254245254|ref|ZP_04938576.1| TolA protein [Pseudomonas aeruginosa 2192]
gi|126171250|gb|EAZ56761.1| TolA protein [Pseudomonas aeruginosa C3719]
gi|126198632|gb|EAZ62695.1| TolA protein [Pseudomonas aeruginosa 2192]
gi|218773286|emb|CAW29098.1| TolA protein [Pseudomonas aeruginosa LESB58]
Length = 347
Score = 47.6 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 22/199 (11%), Positives = 49/199 (24%), Gaps = 12/199 (6%)
Query: 78 VQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQD 137
+ + + K + + K + + +K
Sbjct: 154 IAKKRAEDEAKKKAAEDAKKKAAEDAKKKAAEEAKKKAAAEAAKKKAAVEAAKKKAAAAA 213
Query: 138 LQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFK 197
AE K + + + ++ N V W P +
Sbjct: 214 AAARKAAEDKKAQALAELLSDTTERQQALADEVGSEVTGSLDDLIVNLVSQQWRRPPSAR 273
Query: 198 RFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFR----LSP 253
+ V++ ++ G + G + +A AV L
Sbjct: 274 --NGMSVEVLIEMLPDGTITNASVSRSSGD-----KPFDSSAVAAVRNVGRIPEMQQLPR 326
Query: 254 STYKS-WRNITLFFVPSKM 271
+T+ S +R + F P +
Sbjct: 327 ATFDSLYRQRRIIFKPEDL 345
>gi|116048896|ref|YP_792303.1| TolA protein [Pseudomonas aeruginosa UCBPP-PA14]
gi|296390670|ref|ZP_06880145.1| TolA protein [Pseudomonas aeruginosa PAb1]
gi|313105858|ref|ZP_07792121.1| TolA protein [Pseudomonas aeruginosa 39016]
gi|115584117|gb|ABJ10132.1| TolA protein [Pseudomonas aeruginosa UCBPP-PA14]
gi|310878623|gb|EFQ37217.1| TolA protein [Pseudomonas aeruginosa 39016]
Length = 347
Score = 47.6 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 22/199 (11%), Positives = 49/199 (24%), Gaps = 12/199 (6%)
Query: 78 VQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQD 137
+ + + K + + K + + +K
Sbjct: 154 IAKKRAEDEAKKKAADDAKKKAAEDAKKKAAEEAKKKAAAEAAKKKAAVEAAKKKAAAAA 213
Query: 138 LQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFK 197
AE K + + + ++ N V W P +
Sbjct: 214 AAARKAAEDKKAQALAELLSDTTERQQALADEVGSEVTGSLDDLIVNLVSQQWRRPPSAR 273
Query: 198 RFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFR----LSP 253
+ V++ ++ G + G + +A AV L
Sbjct: 274 --NGMSVEVLIEMLPDGTITNASVSRSSGD-----KPFDSSAVAAVRNVGRIPEMQQLPR 326
Query: 254 STYKS-WRNITLFFVPSKM 271
+T+ S +R + F P +
Sbjct: 327 ATFDSLYRQRRIIFKPEDL 345
>gi|83954260|ref|ZP_00962980.1| hypothetical protein NAS141_18179 [Sulfitobacter sp. NAS-14.1]
gi|83841297|gb|EAP80467.1| hypothetical protein NAS141_18179 [Sulfitobacter sp. NAS-14.1]
Length = 305
Score = 47.6 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 20/228 (8%), Positives = 47/228 (20%), Gaps = 9/228 (3%)
Query: 28 QLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSD 87
+ D + P V +
Sbjct: 75 PPEQAEPVTPPEQAQPVTPPDVAAVTPAAPAAPAALAPTPLAVPPSESAQVAPPPETLQA 134
Query: 88 QTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKK 147
Q ++R E A K + +++ ++ + + +
Sbjct: 135 QDPDSDAPVLSRRPMRKNPETAAKIAEARAKQEQAERERRQAEQQAAARGNAQRNATKGS 194
Query: 148 SIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMH 207
S + S++ + + V R+ + +
Sbjct: 195 SSGQSTSAKSTSTGKRQAAASAQGNAAASNYPGQVMRRISRAGKP----RVRTTGTATIA 250
Query: 208 FQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPST 255
F + G + G L A + K+ F P+
Sbjct: 251 FAIASNGGLASVSVARGSGSA-----ALDRAAVSVIRKAAPFPRPPAG 293
>gi|237746933|ref|ZP_04577413.1| TonB family protein [Oxalobacter formigenes HOxBLS]
gi|229378284|gb|EEO28375.1| TonB family protein [Oxalobacter formigenes HOxBLS]
Length = 287
Score = 47.6 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 31/257 (12%), Positives = 68/257 (26%), Gaps = 21/257 (8%)
Query: 6 GLAISMILHVMFLLL-LYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQF 64
+A+S+++H + L + L S E++ V +
Sbjct: 13 AVAVSVLIHAVVLSARFAVPTSFDLKKGASAIEVVLVS----------PPSRKTIHAGLL 62
Query: 65 KGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYD 124
KG+ V + + +T S ++A + +S
Sbjct: 63 KGTDSIKAVSSGGNAAGTPGSGKEKGEAPNQKKTVAGSEKFTKRAQASGTAEKKIMSKRQ 122
Query: 125 KQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRN 184
+ + + + S+R +R
Sbjct: 123 MPGAFQLPDDPDSRSVVFRRNGNRNGGDTANGYGAANRPVITASTRDVGY-AMYYKALRK 181
Query: 185 RVIANWNIPSDFKRFKKL--RVKMHFQLNQKGFV---LGKINVDVVGGTELVRRMLRENA 239
RV I K +L + + + Q G + G +++ G L + A
Sbjct: 182 RVENLGLINFPQKNGSRLYGELMVRIPVFQDGTLFEKEGGPSIERSSGN----PALDKAA 237
Query: 240 RKAVIKSQAFRLSPSTY 256
+ ++ F P +
Sbjct: 238 LGIIRRAAPFGPFPKSM 254
>gi|120555227|ref|YP_959578.1| hypothetical protein Maqu_2315 [Marinobacter aquaeolei VT8]
gi|120325076|gb|ABM19391.1| hypothetical protein Maqu_2315 [Marinobacter aquaeolei VT8]
Length = 254
Score = 47.6 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 22/254 (8%), Positives = 68/254 (26%), Gaps = 29/254 (11%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPV 61
RL ++++++ H + L L L + P
Sbjct: 16 RLLLAVSLAILAHTLVLA----GLPSPLKEARDLTHRLVFTLTT--------PAAVPTPE 63
Query: 62 VQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVS 121
+ +F + + T + E++ ++++ + + + + +
Sbjct: 64 NVASPEPPKPRHSEFEIPPAEPVVTSTESTSSAPPESQTVTATQPDSPKRTTESTQTGAT 123
Query: 122 PYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAI 181
++ + ++ ++K+ +
Sbjct: 124 SFESPASVATPALTARASEAVETPEPVKQKTETPDERDPFVAKLSSHLS--------EYL 175
Query: 182 VRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARK 241
R + +P D + K ++ +L G V G V + + +
Sbjct: 176 FRETIR----VPVDSEGSKTWIAEIELRLMGNGAVTGAKIVKSTDLKD-----VDAAIYR 226
Query: 242 AVIKSQAFRLSPST 255
A +++ + S
Sbjct: 227 AALEASPYPAPESG 240
>gi|238796154|ref|ZP_04639665.1| hypothetical protein ymoll0001_4960 [Yersinia mollaretii ATCC
43969]
gi|238720099|gb|EEQ11904.1| hypothetical protein ymoll0001_4960 [Yersinia mollaretii ATCC
43969]
Length = 278
Score = 47.6 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 17/171 (9%), Positives = 44/171 (25%), Gaps = 6/171 (3%)
Query: 84 RFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISF 143
+ E K + ++ K+ E L ++
Sbjct: 92 PQQNMAAPDDAPPEKLPEELPKLTASPNGRHAIKPEKGVQKKKITLVKPQVETPLPIVAA 151
Query: 144 AEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDF-KRFKKL 202
+ + K + +++ + V + P + + +
Sbjct: 152 KAAPTTSAPLSGESHKNAATFSSEAAAAISGKASWQSDVLAHLARYKRYPREALRYRLEG 211
Query: 203 RVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSP 253
+ F ++ +G VL G ++L A + ++Q P
Sbjct: 212 VSHIRFVVDHQGKVLTAELFSSSGA-----KILDREAMVLISRAQPLPTPP 257
>gi|15596168|ref|NP_249662.1| TolA protein [Pseudomonas aeruginosa PAO1]
gi|12644680|sp|P50600|TOLA_PSEAE RecName: Full=Protein tolA
gi|9946878|gb|AAG04360.1|AE004530_13 TolA protein [Pseudomonas aeruginosa PAO1]
gi|5733836|gb|AAC44660.2| TolA [Pseudomonas aeruginosa]
Length = 347
Score = 47.6 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 22/199 (11%), Positives = 49/199 (24%), Gaps = 12/199 (6%)
Query: 78 VQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQD 137
+ + + K + + K + + +K
Sbjct: 154 IAKKRAEDEAKKKAAEDAKKKAAEDAKKKAAEEAKKKAAAEAAKKKAAVEAAKKKAAAAA 213
Query: 138 LQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFK 197
AE K + + + ++ N V W P +
Sbjct: 214 AAARKAAEDKKARALAELLSDTTERQQALADEVGSEVTGSLDDLIVNLVSQQWRRPPSAR 273
Query: 198 RFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFR----LSP 253
+ V++ ++ G + G + +A AV L
Sbjct: 274 --NGMSVEVLIEMLPDGTITNASVSRSSGD-----KPFDSSAVAAVRNVGRIPEMQQLPR 326
Query: 254 STYKS-WRNITLFFVPSKM 271
+T+ S +R + F P +
Sbjct: 327 ATFDSLYRQRRIIFKPEDL 345
>gi|148262848|ref|YP_001229554.1| TonB family protein [Geobacter uraniireducens Rf4]
gi|146396348|gb|ABQ24981.1| outer membrane transport energization protein TonB [Geobacter
uraniireducens Rf4]
Length = 251
Score = 47.6 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 28/244 (11%), Positives = 71/244 (29%), Gaps = 28/244 (11%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPV 61
+ S+ +H+ L L+ +V+ + + S + P
Sbjct: 12 HMAKWCMASLAVHLGMLALML---------------EFTVNRVKHTPPVSIDFTLGSSPR 56
Query: 62 VQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVS 121
+ V + + + S+ + ++A
Sbjct: 57 PEQLRGKSTPPVAAPKQPIAPQKLPAVAAQPTPRKQAQTQPESQPTPVVSQNAA------ 110
Query: 122 PYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAI 181
P ++ T E + +S + + R + + +++R ++
Sbjct: 111 PTPSAPLASRTVTENVSRQVSTNQGIPVVAAAPRTAQTSGGGMTPEKAQQRYLNEHFTY- 169
Query: 182 VRNRVIANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENAR 240
+R+ ++ + P +R RV + F + + G V + G L +A
Sbjct: 170 IRDLIVKRLSYPLVARRMGWSGRVVLVFIVAEDGSVRSIQVKESSG-----YPALDNSAM 224
Query: 241 KAVI 244
+ V
Sbjct: 225 ETVK 228
>gi|319779143|ref|YP_004130056.1| hypothetical protein TEQUI_0983 [Taylorella equigenitalis MCE9]
gi|317109167|gb|ADU91913.1| hypothetical protein TEQUI_0983 [Taylorella equigenitalis MCE9]
Length = 360
Score = 47.6 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 17/116 (14%), Positives = 31/116 (26%), Gaps = 9/116 (7%)
Query: 140 GISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRF 199
A++ +I ++ + + + I RV A F
Sbjct: 242 AKEKAKRDAIRGDIMSRAGIKGGQNNTNQIGGGGGNSEYI----RRVQACVQPHLKFNGP 297
Query: 200 KKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPST 255
KKL++ L V V G + +A+ + F P
Sbjct: 298 KKLKLNYKVVLGPNNKVQSSTVVVTSGN-----KAFDTAVLRAIYQCNPFPKPPKG 348
Score = 41.8 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 13/109 (11%), Positives = 31/109 (28%), Gaps = 4/109 (3%)
Query: 8 AISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGS 67
+S +LHV+ ++L NF S + ++ + + V Q
Sbjct: 20 LLSFVLHVILFVVLGLNF---FNNIESASGPVQLELWAEGEE-QVPLPPKDVAVDQKVTP 75
Query: 68 SQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALL 116
+ + + + +Q + + E + E
Sbjct: 76 EDTVVEPEPAPEPVLVPPIEQAQPEVPQPEPAVIPPLPKPDVVPEPEPQ 124
>gi|217969214|ref|YP_002354448.1| protein TolA [Thauera sp. MZ1T]
gi|217506541|gb|ACK53552.1| protein TolA [Thauera sp. MZ1T]
Length = 320
Score = 47.6 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 22/227 (9%), Positives = 57/227 (25%), Gaps = 25/227 (11%)
Query: 42 DNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRS 101
+ + + K E P + K + + + + + + +
Sbjct: 115 EIVAKAPEKKPEPPKPEPPKPEPKPQPKPEPKPEPKPEPKPQPKPEPKPEPKPQAKPEPK 174
Query: 102 SSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKEL 161
K + + + + + + ++ + +++ + +
Sbjct: 175 PQPKPDTKPIDDYMAQRLAQETQRAEQARLS------------------SLMAQEGARAA 216
Query: 162 LSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKIN 221
+ + A + +V N P G VL
Sbjct: 217 AAGPSRQGPPGGDIDKYRAAIAAKVRGNLLRPPGLSG--NPEAVFEVDQLPSGEVLNVRL 274
Query: 222 VDVVGGTELVRRMLRENARKAVIKSQAFRLSPSTYKSWRNITLFFVP 268
G L E +A+ +S L + + R + L F P
Sbjct: 275 KRSSG-----VPALDEAIERAIRRSSPLPLPDNKNQFERTLELKFRP 316
>gi|167837693|ref|ZP_02464576.1| TolA protein [Burkholderia thailandensis MSMB43]
Length = 336
Score = 47.6 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 27/208 (12%), Positives = 55/208 (26%), Gaps = 9/208 (4%)
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
+ + Q +R + E + Q + K+ ++ + +
Sbjct: 138 EREKQKQAEKLRQQQLAEQQRKIEQQKLEQQKLEQQKKQEQLAAQKKADAEKAEKAAKAA 197
Query: 123 YDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIV 182
+ + A K + A+ + I + S S S V
Sbjct: 198 AAAKANAAAKAKLDKERQARLAQLQGIAGGGSGGGEGLAKSGTGTGSGGNAASPGYADKV 257
Query: 183 RNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKA 242
R RV N L + + G VL G + + A
Sbjct: 258 RRRVKPN---IVWAGERDSLVTVVAIRCTPSGDVLSTSIRRSSGNSGW-----DQAVINA 309
Query: 243 VIKSQAFRLSPSTYKSWRNITLFFVPSK 270
+ S + ++ IT+ F ++
Sbjct: 310 IQASVPLP-PDTNGRTPSEITITFKAAE 336
>gi|323251391|gb|EGA35263.1| cell envelope integrity inner membrane protein TolA [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008282]
Length = 302
Score = 47.6 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 37/299 (12%), Positives = 88/299 (29%), Gaps = 42/299 (14%)
Query: 2 RLENGLAISMILHVMFLLLLYFN-FNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP 60
+L+ + IS +LH++ +L ++ F+ + ++D + + + ++
Sbjct: 10 KLKRAIIISAVLHIILFAVLIWSSFDEHIEASAGGGGGSAIDAVMVDPGAVVQQYNRQQD 69
Query: 61 VVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPV 120
++E + Q + + + K +++ +Q E A
Sbjct: 70 QQASARRAEEERKKLQQQQAEELQQKQAAEQERLKQLEKERLAAQEQQKQAEEAAKLAQQ 129
Query: 121 SPYDKQKISKATNKE------------------------------QDLQGISFAEKKSID 150
++ +KA DL G + K +
Sbjct: 130 QQQQAEEAAKAAADAKKKADAAAAKAAADAKKKAAAEKAAAAEGVDDLLGDLSSGKNAPK 189
Query: 151 TVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVI-ANWNIPSDFKRFKKLRVKMHFQ 209
T + S + I+ ++ A + D ++ + +H
Sbjct: 190 TGGGAKGNGQPSKDSGTSGANGGATGADISAYAKQIQVAIQSRLYDASLYQGKQCVLHIS 249
Query: 210 LNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPST--YKSWRNITLFF 266
L G + + GG + + A+ A PS Y+ ++ L F
Sbjct: 250 LAPDGSLKS---ITSEGGDPALCQAALMAAKTA-----KIPKPPSQAVYEKIKDAKLDF 300
>gi|123440703|ref|YP_001004695.1| hypothetical protein YE0315 [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|122087664|emb|CAL10447.1| putative membrane protein [Yersinia enterocolitica subsp.
enterocolitica 8081]
Length = 265
Score = 47.6 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 21/185 (11%), Positives = 48/185 (25%), Gaps = 6/185 (3%)
Query: 71 NLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISK 130
+ + E + K + K + +R K+
Sbjct: 66 QQAKSAPREIPQGLQQSMAAPDDAPPEKRLEELPKLTHSAKGTHAIRPEKVVQKKKIEPT 125
Query: 131 ATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANW 190
L ++ + + K + +S + V +
Sbjct: 126 KPRTATPLPVVAEKAAPTTSAPLPGESHKNTATFASDASAAISGKASWQSDVLAHLSRYK 185
Query: 191 NIPSDF-KRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAF 249
P + + + + F ++ KG VL G +ML A + ++Q
Sbjct: 186 RYPREALRYRLEGISHVRFVVDHKGKVLTAELFTSSGA-----KMLDREAMILISRAQPL 240
Query: 250 RLSPS 254
+ P+
Sbjct: 241 PIPPA 245
>gi|312882596|ref|ZP_07742336.1| outer membrane integrity protein TolA [Vibrio caribbenthicus ATCC
BAA-2122]
gi|309369756|gb|EFP97268.1| outer membrane integrity protein TolA [Vibrio caribbenthicus ATCC
BAA-2122]
Length = 351
Score = 47.6 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 18/187 (9%), Positives = 59/187 (31%), Gaps = 2/187 (1%)
Query: 4 ENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQ 63
+ + IS LH + +++L + + + P ++ I + +
Sbjct: 12 KKPIIISASLHALLIVVLLWGSDFSMSTPQPSGNLVQAVVIDPAVVRQQAQQIRSQRQEA 71
Query: 64 FKGSSQ--ENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVS 121
K + + L R+ E + ++ E + K + +++ + + + +
Sbjct: 72 AKREQERLDKLRRESERLEKNRKAEEERIRQLKEKQAKEAKAARDAEKERLAKEKQRKAE 131
Query: 122 PYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAI 181
K+ ++ + E+K+ + ++ L + + + A
Sbjct: 132 EQRVAKLEAERKAKEQAIKKAEQERKAKQAAAEKAEQARLAREKAAKEAEEKALRQKEAA 191
Query: 182 VRNRVIA 188
+
Sbjct: 192 KKAEQER 198
Score = 39.9 bits (91), Expect = 0.39, Method: Composition-based stats.
Identities = 25/262 (9%), Positives = 79/262 (30%), Gaps = 30/262 (11%)
Query: 34 SRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHA 93
+ + ++ +++ + E + + ++E V + + +
Sbjct: 96 EEERIRQLKEKQAKEAKAARDAEKERLAKEKQRKAEEQRVAKLEAERKAKEQAIKKAEQE 155
Query: 94 TENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKE------------------ 135
+ + + ++ + +E A +++ +K +E
Sbjct: 156 RKAKQAAAEKAEQARLAREKAAKEAEEKALRQKEAAKKAEQERIAKEKAAKAAAEKARKE 215
Query: 136 ----QDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWN 191
+ L+ ++ ++D + + + + +S A+ RN +
Sbjct: 216 KERLERLKRERKEQEAALDDIFSGLESESQANSSAQSRFLDDERSRYTALYRNTIQQYLL 275
Query: 192 IPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRL 251
F + +++ +L G G + L A+ A+ +++ F
Sbjct: 276 TNQSFNGKE---CRVNIRLVPTG---GTKAIVSSAKVLSGDASLCRAAKAAIAQAKEFDF 329
Query: 252 S--PSTYKSWRNITLFFVPSKM 271
P +R+ F P +
Sbjct: 330 PQDPQLQSEFRDFNFTFTPRDL 351
>gi|170727077|ref|YP_001761103.1| protein TolA [Shewanella woodyi ATCC 51908]
gi|169812424|gb|ACA87008.1| protein TolA [Shewanella woodyi ATCC 51908]
Length = 309
Score = 47.6 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 26/313 (8%), Positives = 82/313 (26%), Gaps = 56/313 (17%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKY-------- 54
+ L IS +H+ ++++ + + D
Sbjct: 5 ITIPLIISAGIHIGVIVIVAMGVDFSEKPKPQVQASAPAVQAVVVDQSKVAQHVERLKAE 64
Query: 55 ------------------------------------KKIEEPVVQFKGSSQENLVRDFSV 78
++ + ++ +
Sbjct: 65 KKEAERKEKARQDEANRQVREARKEREREQARIKQLEQERKQKEVETKNAADAAKAAQLK 124
Query: 79 QENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDL 138
Q+ + + + + E +R +S + + E + +++ + E+
Sbjct: 125 QKQEKEKAAKAEADRKQKEKERKASEEAARKAAEKRKAEEAAAKKAEEERKRKAEAERKR 184
Query: 139 QGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKR 198
+ A ++ + ++ ++ + +++ + N +
Sbjct: 185 KAEEEARRQQEQMMQDALAAEQASLSQTRNKQVTSEVSRYTSMIVATISRNVQQEESMRG 244
Query: 199 FKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLS--PSTY 256
+ +L + GFV V+ +L + A+ K Q +S P Y
Sbjct: 245 K---SCTVWVRLAKDGFVTSSRIVEGD-------PVLCRATQSAIQKVQRLPVSSEPDVY 294
Query: 257 KSWRNITLFFVPS 269
+ + + + P
Sbjct: 295 DKLKELNIIYRPK 307
>gi|261252509|ref|ZP_05945082.1| TolA protein [Vibrio orientalis CIP 102891]
gi|260935900|gb|EEX91889.1| TolA protein [Vibrio orientalis CIP 102891]
Length = 356
Score = 47.6 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 20/167 (11%), Positives = 58/167 (34%), Gaps = 4/167 (2%)
Query: 4 ENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQ 63
+ +AIS LHV+ ++ L + + + P ++ + + + ++I Q
Sbjct: 12 KKPIAISAGLHVLLIVALIWGTDFTMSKPEPVGRVVQA-VVIDPAMVREQAQQIRSQREQ 70
Query: 64 FKGSSQE---NLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPV 120
QE L R+ E + ++ E + K + +++ + + +
Sbjct: 71 AAKKEQERLDKLRRESEQLEKNRKAEEERIRKLKEQQVKEAKAAREAEKRRVAKEKERKA 130
Query: 121 SPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEK 167
+K + K + + K + + + ++ ++
Sbjct: 131 EELRAKKEKERAAKLEVERKAKEQAVKKAEQERLAKEAAIAKAEQQR 177
>gi|78777202|ref|YP_393517.1| TonB-like [Sulfurimonas denitrificans DSM 1251]
gi|78497742|gb|ABB44282.1| TonB-like protein [Sulfurimonas denitrificans DSM 1251]
Length = 239
Score = 47.2 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 28/236 (11%), Positives = 69/236 (29%), Gaps = 33/236 (13%)
Query: 5 NGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQF 64
+G IS+ LHV+ + L + + + +P M +
Sbjct: 10 SGFYISLALHVVAIFTLVYALDTKSKLPTPLEPMF----------------------ISL 47
Query: 65 KGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYD 124
K V + + K+ + E K +
Sbjct: 48 KNFELPKEVSSKVAKPEPIKKEIVQKSKVAKVEKKVEVLEPKKIE---------QEVQTP 98
Query: 125 KQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRN 184
+ +K K+ + + D + + + + + +R+
Sbjct: 99 AKIAKPLKDKSAQTSSAPQESTKAQENHEAKEDVIQESIAQSEEAEQEEYEKTNFHSIRD 158
Query: 185 RVIANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENA 239
V+AN P++ +R V++ ++ G ++ + G L+ + ++A
Sbjct: 159 MVLANLKYPNNARRMGLHGTVEIVLVIDTNGKLIDV-ILHKSSGHSLLDKSALKSA 213
>gi|85714505|ref|ZP_01045493.1| translocase [Nitrobacter sp. Nb-311A]
gi|85698952|gb|EAQ36821.1| translocase [Nitrobacter sp. Nb-311A]
Length = 251
Score = 47.2 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 20/177 (11%), Positives = 54/177 (30%), Gaps = 8/177 (4%)
Query: 79 QENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDL 138
E D + + E + + + E V+ D + +++
Sbjct: 64 AEAKDVAPGEEQMQTDEAPPPQEKAEVKTEKEPEPEPPLPQVADPDVA--LETPPEQKKQ 121
Query: 139 QGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDF-K 197
+ EK+ I + + ++ ++ P + + + N P D
Sbjct: 122 EEEKKDEKEKIPNATPPVVASSVTTAPTAAAARKAPLVNWKRKLALHLQRNKRYPRDAQA 181
Query: 198 RFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPS 254
R + ++ F +++ G ++ G L + + ++Q P+
Sbjct: 182 RHETGTARVFFVVSRDGHIISSKIAKGSGSA-----ALDRETLELLQRAQPLPQPPN 233
>gi|291276525|ref|YP_003516297.1| putative tonB transport protein [Helicobacter mustelae 12198]
gi|290963719|emb|CBG39553.1| putative tonB transport protein [Helicobacter mustelae 12198]
Length = 246
Score = 47.2 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 22/112 (19%), Positives = 42/112 (37%), Gaps = 7/112 (6%)
Query: 146 KKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFK-RFKKLRV 204
K+ D + + E + S + ++ +R + N P + R + +V
Sbjct: 126 KQETDEKQKSSNLDQEGQTAEALAYNEGISDEFLSKIRTAIAQNNPYPRIARVRGLEGQV 185
Query: 205 KMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQA-FRLSPST 255
+ F LN G + G +D G +L ++A +AV + F L
Sbjct: 186 TVEFILNVDGSIDGLKILDSNAGN-----VLNKSALQAVNDAAKEFPLPKQR 232
>gi|223939297|ref|ZP_03631177.1| hypothetical protein Cflav_PD1218 [bacterium Ellin514]
gi|223892010|gb|EEF58491.1| hypothetical protein Cflav_PD1218 [bacterium Ellin514]
Length = 339
Score = 47.2 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 41/322 (12%), Positives = 81/322 (25%), Gaps = 65/322 (20%)
Query: 6 GLAISMILHVMFLLLLYF-----------NFNV---------------------QLLVPI 33
IS+ H++F+ + Y + + QL
Sbjct: 21 AFIISLTAHLVFVGIYYTGQRLGWWEHLRSLSWLKKAQQALSAAQPNVQLHPAEQLPQQE 80
Query: 34 SRREMLSVDNIYNEDYHS------------SKYKKIEEPVVQFKGSSQENLVRDFSVQEN 81
+ + + VD + K + + K Q+ V E+
Sbjct: 81 IQLQFIDVDPSQVTQEKPKDATYYSAANALAANKDTDIQSNKPKIEGQQKDVPKTQTSED 140
Query: 82 GDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATN-------- 133
F Q + + + K + K L + + +N
Sbjct: 141 RKPFPLQPAAQKGPEQKEETQEPKPKGGPKVGDLAMAKPAEKPGDGKVENSNGQSDGTTH 200
Query: 134 KEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIP 193
K + + + + K P + A V W
Sbjct: 201 KRPRTLADAGKVAPLPGMAMKQEGGVKRKMVDPSFDVKGTPFGEYDAAFVRAVSLRWYTL 260
Query: 194 SDFKR---FKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFR 250
D + +V + F+L G + + GT + ++A+ S +
Sbjct: 261 MDEQTVTMESAGKVTLEFRLYYDGRISEIKVLRNTAGTLMGYL-----CQRAITDSAPYE 315
Query: 251 LSPSTYKS-----WRNITLFFV 267
PS + +R IT F
Sbjct: 316 RWPSDMRKVIGADYREITFTFN 337
>gi|126643047|ref|YP_001086031.1| TonB-like protein [Acinetobacter baumannii ATCC 17978]
Length = 253
Score = 47.2 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 22/203 (10%), Positives = 66/203 (32%), Gaps = 12/203 (5%)
Query: 75 DFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNK 134
+ + + + + +R + + + + + K+ + + ++
Sbjct: 50 SPAPMPSDASTGEAQLETLEKVQQQRELKFEEKVLMTVLSWQKQAEESQRKKALEQLQSQ 109
Query: 135 EQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPS 194
Q + + + +++ + V+ K+ S + R +V N
Sbjct: 110 FQAKAAMVASLEAQYLQRQQDFSRQQKIKTVDGIQAKKDASAAYLDKFREKVELYGNRYY 169
Query: 195 DFKRFKK---LRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRL 251
+ ++ V++ LN +G + ++ G +L E A+ +V + F
Sbjct: 170 PEEAKQQQLKGEVRLMVILNAQGGIRAIRLLESSG-----HPVLDEAAKASVRRGAPFGR 224
Query: 252 SPSTYKSWRNITLF----FVPSK 270
K + + F P++
Sbjct: 225 FDVNMKDISELRIIRTWRFDPAE 247
>gi|172037965|ref|YP_001804466.1| hypothetical protein cce_3052 [Cyanothece sp. ATCC 51142]
gi|171699419|gb|ACB52400.1| hypothetical protein cce_3052 [Cyanothece sp. ATCC 51142]
Length = 280
Score = 47.2 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 32/240 (13%), Positives = 66/240 (27%), Gaps = 13/240 (5%)
Query: 5 NGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQF 64
+G +S +LHV ++ + N L S+ ++ + + K+E V
Sbjct: 27 SGFIVSGLLHVAGVMAFVW-LNQNNLDNASQPPPNPIEF-QVIEPPEPEVAKVEPEPVVE 84
Query: 65 KGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYD 124
E +VQE S K + +
Sbjct: 85 PEPQPEPETPSETVQEARISAKQLL---PDPIPESASPQPKAIAPSPSQSTPQTIPLGSL 141
Query: 125 KQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRN 184
+ + T + ++ S + + I++
Sbjct: 142 GGQSLEGTLTGTQGSSLGMGDQGSSQGQQAGSPLGTGTGSSQGTGNGNGEGASWISL--K 199
Query: 185 RVIANW-NIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAV 243
+ PS + +V + F++ G V ++ G +E L + A AV
Sbjct: 200 CISNCQPQYPSTIAKKVPGKVIVQFRVETDGSVSSPQVLETSGNSE-----LDKAAVSAV 254
>gi|120610899|ref|YP_970577.1| TonB family protein [Acidovorax citrulli AAC00-1]
gi|120589363|gb|ABM32803.1| Cell division and transport-associated protein TolA [Acidovorax
citrulli AAC00-1]
Length = 351
Score = 47.2 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 24/223 (10%), Positives = 72/223 (32%), Gaps = 8/223 (3%)
Query: 48 DYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGE 107
+ + KK + + + ++ R+ + +E + + + E ++ K +
Sbjct: 137 KEQAEQEKKERQQKEKAQREKEQQQQREKAQREKEQQQQREKEQREKERREQQEKLEKQQ 196
Query: 108 QALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEK 167
+ L+ + ++ K + + + + ++++ + +
Sbjct: 197 AEKERQEQLQKKQAEDKRKAEEKRKAEAAEAKRLEALRQENLRRMQGLAGATGGETATGN 256
Query: 168 SSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGG 227
+ R PS V +V N P LR ++ + + G ++G G
Sbjct: 257 AQRSSGPSGSYGGKVAAKVRPNIVYPDAISD--NLRTEVEVRASPDGTIVGIRVTKSSGN 314
Query: 228 TELVRRMLRENARKAVIKSQAFRLSPSTYKSWRNITLFFVPSK 270
+ + +A+ K+ + ++ + F P
Sbjct: 315 -----KSWDDAVVRALEKTDTLPRDVDG-RVPSSLVIGFRPKD 351
>gi|260641974|ref|ZP_05414185.2| putative TonB exported protein [Bacteroides finegoldii DSM 17565]
gi|260623962|gb|EEX46833.1| putative TonB exported protein [Bacteroides finegoldii DSM 17565]
Length = 293
Score = 47.2 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 23/249 (9%), Positives = 62/249 (24%), Gaps = 23/249 (9%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVP-------------------ISRREMLSVDNIYN 46
G ++++HV + LL + + P ++ VD +
Sbjct: 12 GALGALLVHVAVIALLIL-VSFTVPQPDEDAGGIPVMMGNVESARGFDDPSLVDVDVLDE 70
Query: 47 EDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKG 106
+ ++ + ++E V E + + + K E +
Sbjct: 71 DAAAPAETQPELPSEQDLLTQTEEETVAVKPKTEEVKKETVKPKETVKPKEPVKKPEKTE 130
Query: 107 EQALKESA--LLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSK 164
+ E+ + + + +
Sbjct: 131 AEKAAEAKRLAEEKAERERKAAEEAARKKVAGAFGKGAQMTGNKGTATGGTGTEGGKEGN 190
Query: 165 VEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRF-KKLRVKMHFQLNQKGFVLGKINVD 223
++ I + + + A ++P ++ RV ++ +N G V+
Sbjct: 191 SSTGAKIGIGGEGTFDLGGRSLGAGTSLPKPVYNVQEEGRVVVNITVNPAGQVIATSINL 250
Query: 224 VVGGTELVR 232
T
Sbjct: 251 SHTNTPNRF 259
>gi|298527877|ref|ZP_07015281.1| TonB family protein [Desulfonatronospira thiodismutans ASO3-1]
gi|298511529|gb|EFI35431.1| TonB family protein [Desulfonatronospira thiodismutans ASO3-1]
Length = 281
Score = 47.2 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 29/257 (11%), Positives = 80/257 (31%), Gaps = 19/257 (7%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPV 61
RL + +++ H + LL F + + +SV + + + +++ +
Sbjct: 3 RLAVAVLLALFAHGLLLLTGDFQMKQRAGRDADEPKRISVSLEHYTPHEQGQTEEVSDHE 62
Query: 62 VQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALL----- 116
+ E+ + S E + + E ++ + + + AL
Sbjct: 63 FELPEEPDESEDPEESETEKKPPQEPVEEELPRQPEPEKKQPEEETRVKQAQALQEAEAA 122
Query: 117 ------RMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSR 170
+ + K ++ L ++ + ++ E +++
Sbjct: 123 HEAESGPEQEEKTREADVQKPEDRTSALNASPVPQEPAGAPRMISQAALEAHEALDEYIS 182
Query: 171 KRIPSQDAIAIVRNRVIANWNIPSDFK---RFKKLRVKMHFQLNQKGFVLGKINVDVVGG 227
+ + + + R N + R ++ +V + +N +G V + G
Sbjct: 183 EAGREDEELQMARPLYRENTPPEYPRRARQRNQQGKVILEVLVNSRGRVEEMEVAESSG- 241
Query: 228 TELVRRMLRENARKAVI 244
+L A+ AV
Sbjct: 242 ----YSILDRAAKDAVR 254
>gi|258542442|ref|YP_003187875.1| ferric iron siderophore receptor [Acetobacter pasteurianus IFO
3283-01]
gi|256633520|dbj|BAH99495.1| ferric iron siderophore receptor [Acetobacter pasteurianus IFO
3283-01]
gi|256636579|dbj|BAI02548.1| ferric iron siderophore receptor [Acetobacter pasteurianus IFO
3283-03]
gi|256639632|dbj|BAI05594.1| ferric iron siderophore receptor [Acetobacter pasteurianus IFO
3283-07]
gi|256642688|dbj|BAI08643.1| ferric iron siderophore receptor [Acetobacter pasteurianus IFO
3283-22]
gi|256645743|dbj|BAI11691.1| ferric iron siderophore receptor [Acetobacter pasteurianus IFO
3283-26]
gi|256648796|dbj|BAI14737.1| ferric iron siderophore receptor [Acetobacter pasteurianus IFO
3283-32]
gi|256651849|dbj|BAI17783.1| ferric iron siderophore receptor [Acetobacter pasteurianus IFO
3283-01-42C]
gi|256654840|dbj|BAI20767.1| ferric iron siderophore receptor [Acetobacter pasteurianus IFO
3283-12]
Length = 285
Score = 47.2 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 17/192 (8%), Positives = 45/192 (23%), Gaps = 6/192 (3%)
Query: 64 FKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPY 123
+ S ++ S + +
Sbjct: 77 APEPVSTPTPPTDAPIGPQQTQSVPDPAPVEPSKVTAPPSPAPNPPVPVPKPEKPHKIVK 136
Query: 124 DKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVR 183
+ + D + A + + + SS+ +
Sbjct: 137 KHKPVPHLKKPIPDKTPPAEATTAPPSSEAPPAPAQAAPAPGASSSKASHDPVTWQGALL 196
Query: 184 NRVIANWNIPSDF-KRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKA 242
++ P+D ++ + F +++KG V+ G +L + A
Sbjct: 197 AQLEKFKRYPADAMADHQEGVPTVTFSMDRKGHVVAVTLASSSGHA-----LLDQEAVAL 251
Query: 243 VIKSQAFRLSPS 254
++Q + P
Sbjct: 252 PKRAQPLPIPPD 263
>gi|253997404|ref|YP_003049468.1| TonB family protein [Methylotenera mobilis JLW8]
gi|253984083|gb|ACT48941.1| TonB family protein [Methylotenera mobilis JLW8]
Length = 246
Score = 47.2 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 22/250 (8%), Positives = 62/250 (24%), Gaps = 41/250 (16%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
+ S++LH + +L++ + E+L + + +
Sbjct: 19 AIVCSILLHGLLVLII----PNIHFDAVKMPEVLEIQLV--KQAAPPAPPPQPVQPPAEV 72
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
Q + + + ++ E + A R +
Sbjct: 73 VEPQTKAIPKPLPKPVVKQTPSPIVQETRPIPETPIITAAPEVIAVKPAPERTAPTHTPP 132
Query: 126 QKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNR 185
+++ + + + + + + N
Sbjct: 133 --VAEPVKEAPPMPSQADIDN---------------------------ATGRYGNSLWNA 163
Query: 186 VIANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVI 244
+ + P + + + +L+ G + K G +L + A + V
Sbjct: 164 ISKHKKYPKIAQMRGWQGEAIVELELDGSGKLKSKKITQSSG-----YEVLDKQALEMVE 218
Query: 245 KSQAFRLSPS 254
K+ F P
Sbjct: 219 KAVPFPTPPE 228
>gi|257464100|ref|ZP_05628484.1| TonB protein [Fusobacterium sp. D12]
Length = 245
Score = 47.2 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 26/245 (10%), Positives = 68/245 (27%), Gaps = 28/245 (11%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVD-NIYNEDYHSSKYKKIEEPV 61
++ L +S +H++ L Y + + + +++SV + N +
Sbjct: 1 MKKYLVLSFCIHILCFLGFYHHEMHKGEEKLPLNQVISVSFVVENPPPSDNPGSPNVADR 60
Query: 62 VQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVS 121
V K + K + K + ++ +S +
Sbjct: 61 VLEKKENS-----------------TNEKPKEQPKKEKPKKEEQVKEKTFDSKMATKDAK 103
Query: 122 PYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAI 181
+++ S + + + D + + + +
Sbjct: 104 EVKQEESSAVEADSDNKESSETGKSSGNDNPFYGSNFQANGDGSYTALSSEGIN----YQ 159
Query: 182 VRNRVIANW-NIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENAR 240
+ V ++ + +++ VK+ F + KG V V +
Sbjct: 160 ILQEVEPDYPSQAEAIGYDQRVSVKVKFLVGLKGNVENIQIVKSHKKLG-----FDDEVM 214
Query: 241 KAVIK 245
KA+ K
Sbjct: 215 KAIKK 219
>gi|326570296|gb|EGE20341.1| hypothetical protein E9U_05355 [Moraxella catarrhalis BC8]
Length = 266
Score = 47.2 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 31/243 (12%), Positives = 62/243 (25%), Gaps = 29/243 (11%)
Query: 7 LAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKG 66
+ S++LH + ++ + P + + V +
Sbjct: 21 ILASVLLHTVIIIAVAAPLITPPTKPNTTIQTALV-------------------GQEAFN 61
Query: 67 SSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQ 126
+ L + Q + + A +N+ + + + + Y
Sbjct: 62 RVKTALSNHHADQNKPTATNTSSTITANDNDNAFMQAQNQHRYHPQVSTSATTTQAYHPP 121
Query: 127 KISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRV 186
S + S +S+ R AI V++R+
Sbjct: 122 PNSAPFESNSPNIQNQPTNAHAKLAEYSNHVSDLEQSSHTESTPSRAQINAAITSVKHRI 181
Query: 187 IANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKS 246
A W + +NQ+G V GG R E+ AV +
Sbjct: 182 EAIWQRYPKQP---NQTITFQVNMNQQGDVTSIQF----GGGHPDLR---ESVEAAVYAA 231
Query: 247 QAF 249
F
Sbjct: 232 APF 234
>gi|294783982|ref|ZP_06749304.1| TonB protein [Fusobacterium sp. 1_1_41FAA]
gi|294479794|gb|EFG27573.1| TonB protein [Fusobacterium sp. 1_1_41FAA]
Length = 267
Score = 47.2 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 28/267 (10%), Positives = 80/267 (29%), Gaps = 11/267 (4%)
Query: 3 LENGLAISMILHVMFLLLLY-FNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPV 61
++ + IS+I+H+ L L + + + E++ + + + ++ K ++
Sbjct: 1 MKKYVLISLIVHLAILFLFATIKTDEVEKEKLVKNEVVPIAFVAKQTSNNPGAKTLDTQE 60
Query: 62 VQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVS 121
+ + + + ++ + + K ++ S
Sbjct: 61 REKPKEEKPKSEPKIEKKIEEKKVEEKKPVEKPIEKKAEKTEEKKIESNIPSKNEPSHSD 120
Query: 122 PYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAI 181
K ++ D ++ S + D + + S+
Sbjct: 121 TSSKSSSESSSTSSSDKSSNHSSDGGSPNGNSSGEDLGSNFIADGDGTYIALTSEGINYQ 180
Query: 182 VRNRVIANW-NIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENAR 240
+ N V ++ + +++V + F + KG V +
Sbjct: 181 IINEVEPDYPSQAESIGYSNQVKVTVKFLVGLKGNVEKAEIIKSHKDLG-----FDAEVM 235
Query: 241 KAVIKSQAFRLSPSTYKSWRNITLFFV 267
KA+ K + + +NI ++F
Sbjct: 236 KAIKKWR----FKPIFHKGKNIKVYFT 258
>gi|90423488|ref|YP_531858.1| TonB-like [Rhodopseudomonas palustris BisB18]
gi|90105502|gb|ABD87539.1| TonB-like [Rhodopseudomonas palustris BisB18]
Length = 266
Score = 47.2 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 28/250 (11%), Positives = 59/250 (23%), Gaps = 26/250 (10%)
Query: 7 LAISMILHVMFLLLLYFNFNVQLLVPI-SRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
L ++ + + + + N + L ++ S + P +
Sbjct: 24 LLAAVTVAGLHVAAVMAGLNWKPAEAAGDPPAALMMELAPLAVAPESTEQVAPGPQLTEA 83
Query: 66 GSSQENLVRDFSVQENGD-RFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYD 124
E + D + D K A K K+ R D
Sbjct: 84 QPEAEPEPEVPVEDKPPDIKLPDTAKLEAAAVLPPPPKPEKKPPPKKKREAERTKPINPD 143
Query: 125 KQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRN 184
+ K A + S + + +S + +
Sbjct: 144 RSK----------------ATQTSAPPAAQAQSADRMAAPAAGASTSSASAASWRGALMA 187
Query: 185 RVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVI 244
+ + P ++ F +++ G V V G L A V
Sbjct: 188 HLNRHKRFPPG---GGAGMAQVAFTIDRSGEVRAARLVGSSGDA-----ALDAEAVGLVR 239
Query: 245 KSQAFRLSPS 254
++ P+
Sbjct: 240 RASPVPPPPA 249
>gi|332994719|gb|AEF04774.1| hypothetical protein ambt_16335 [Alteromonas sp. SN2]
Length = 300
Score = 47.2 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 28/180 (15%), Positives = 60/180 (33%), Gaps = 3/180 (1%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQL-LVPISRREMLSVDNIYNEDYHSSKYKKIEEP 60
+L GL IS +LH++ L+++ F + + P + +S Y + EP
Sbjct: 40 KLAKGLLISTLLHLIGLVIVIFFTTFESGVKPAHKPAPISATLYYPHVSVEKTITEAPEP 99
Query: 61 VVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPV 120
V + N+ S + ++Q K T+ + + +K +A ++
Sbjct: 100 VEVIPPVVEPNVPE--SPKAKVTDTAEQIKAVETKPVEAKPAEAKPTEAKQDKTAPNTES 157
Query: 121 SPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIA 180
+ + + + + T + L + S Q+ IA
Sbjct: 158 TITENNSTETPLPEAPAPTISNTQATINASTRNQKAGSLNLSPRTSASQFFNRREQEEIA 217
>gi|332974348|gb|EGK11278.1| TonB family domain protein [Psychrobacter sp. 1501(2011)]
Length = 300
Score = 47.2 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 29/272 (10%), Positives = 72/272 (26%), Gaps = 43/272 (15%)
Query: 8 AISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKG- 66
A+S+I+H L + F+ + + + + I E+ S + G
Sbjct: 24 ALSLIVHGSILAFIIFS---HQVPKLDDSQSIETTIITPEELASLQADIKANRETLAAGG 80
Query: 67 -SSQENLVRDFSVQENGDR--------------FSDQTKTHATENETKRSSSSKGEQALK 111
+ + + D T++ SSS +
Sbjct: 81 VPNTPEMNSTSVPATSNDNSFIGGDSAFSRGISSIFNKVAEPTQDPVSASSSDPVFTEMT 140
Query: 112 ESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELL--------- 162
E + D + + + ++ + + + + V
Sbjct: 141 ELDEMPSTEQTSDATESTASADESKPVNSAPKVKANTEGQGQVAATFPSGTEGNKNKSSS 200
Query: 163 -----SKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVL 217
++ + + D + N + W P V + +++ G VL
Sbjct: 201 GGGTAAQSTGNGNSKSSGGDITGALVNLIEPQWTPPVGRVGS---TVSVSVTVDENGNVL 257
Query: 218 GKINVDVVGGTELVRRMLRENARKAVIKSQAF 249
++ + E+ AV ++
Sbjct: 258 SV----NANTSDAELKQSLES---AVNRASPL 282
>gi|318607479|emb|CBY28977.1| ferric siderophore transport system, periplasmic binding protein
TonB [Yersinia enterocolitica subsp. palearctica Y11]
Length = 265
Score = 47.2 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 21/171 (12%), Positives = 47/171 (27%), Gaps = 6/171 (3%)
Query: 85 FSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFA 144
E +R K + K + +R K+ + ++
Sbjct: 80 QQSMAAPDDAPPEKRREELPKLTHSAKGTHAIRPEKVVQKKKIEPTKPRTDTPQPVVAEK 139
Query: 145 EKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDF-KRFKKLR 203
+ + K + +S + V + P + + +
Sbjct: 140 AAPTTSAPLPGERHKNTATFSSDASAAISGKAAWQSDVLAHLSRYKRYPREALRYRLEGI 199
Query: 204 VKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPS 254
+ F ++ KG VL G +ML A + ++Q + P+
Sbjct: 200 SHVRFVVDHKGKVLTAELFASSGA-----KMLDREAMILISRAQPLPIPPA 245
>gi|298290784|ref|YP_003692723.1| TonB family protein [Starkeya novella DSM 506]
gi|296927295|gb|ADH88104.1| TonB family protein [Starkeya novella DSM 506]
Length = 290
Score = 47.2 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 26/245 (10%), Positives = 63/245 (25%), Gaps = 13/245 (5%)
Query: 11 MILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQE 70
+++H L + + + + + +++ +E
Sbjct: 28 LVVHGGALAYMLREPPIVAAEEPAAIMIELAEM-PVAPEAEPTEAPPGPEMMEAPEKIEE 86
Query: 71 NLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISK 130
+ D + + S + + ++K
Sbjct: 87 EVPPDPLAEAEDVPPPEPMPEQEDPLPEVAESPAPDIEVPLPPPPPLAAELTPPEKKPDP 146
Query: 131 ATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSK-----VEKSSRKRIPSQDAIAIVRNR 185
+ + EK L + S+ S + A R+R
Sbjct: 147 PKERPKPKPKPKQREKSDKPPAPRTAAAPALDAARSDRIAAPSAGATSSSSRSPANWRSR 206
Query: 186 VIANWNIPSDFKRFKKL--RVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAV 243
++ + N F + + ++ F +N+ G VLG V G + A V
Sbjct: 207 LMGHLNRFKRFPAGENGTGKARVAFAINRSGQVLGVRLVGSSGNAS-----FDQEAVAMV 261
Query: 244 IKSQA 248
++
Sbjct: 262 RRASP 266
>gi|227820266|ref|YP_002824237.1| hypothetical protein NGR_b20370 [Sinorhizobium fredii NGR234]
gi|227339265|gb|ACP23484.1| hypothetical protein NGR_b20370 [Sinorhizobium fredii NGR234]
Length = 312
Score = 47.2 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 17/171 (9%), Positives = 51/171 (29%), Gaps = 3/171 (1%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
G+ S+ LH+ +L P ++ E ++V + K + +
Sbjct: 15 GMPTSVALHLALAFILLVRLP--EHAPPAKDESINVALVS-PPKPEPKPQDKPKEAKPEP 71
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
S + S + + ++ A + T + S + +
Sbjct: 72 SRSPPQVFESASAEVDREKPPQPQLPPAGPSRTDKPKSPDAQAKPAPAKTESADKPAEAS 131
Query: 126 QKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQ 176
+ +++ + +D + + + V +K +++ +
Sbjct: 132 KALAELRVEGEDAVSKAGDAEPTPQNAPVPKEKPVAEEAKADVAQEPAEAA 182
>gi|60683182|ref|YP_213326.1| putative TonB exported protein [Bacteroides fragilis NCTC 9343]
gi|265767078|ref|ZP_06094907.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
gi|60494616|emb|CAH09417.1| putative TonB exported protein [Bacteroides fragilis NCTC 9343]
gi|263253455|gb|EEZ24931.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
Length = 280
Score = 47.2 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 25/251 (9%), Positives = 61/251 (24%), Gaps = 21/251 (8%)
Query: 1 MRLEN-----GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYK 55
M ++ G ++++HV + LL + + P + V + + D Y
Sbjct: 1 MNIKRKSEYIGALGALLVHVAIIALLIL-VSFAIPHPDEEAGGVPV-MMGDVDAAYGNYD 58
Query: 56 KIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESAL 115
V+ + V+ + + + K + A K
Sbjct: 59 PSTMVDVEVLPEEVPAPQPEPEVETEQEMITQTEEETVVVKPKAEPKKEKPKVAKKPEKT 118
Query: 116 LRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPS 175
+ K KA + + + + + + +
Sbjct: 119 PEEKAAEAKKLAEEKAERERKAAAEAASKRVAGAFGKGSQMGGSKGTATSGEGVEGSKDG 178
Query: 176 QDAIAIVRNRVIANWNIPSDFKRF-------------KKLRVKMHFQLNQKGFVLGKINV 222
++ V + ++ RV + +N G V+
Sbjct: 179 NSLTGA-KSGVGGYGTFNLGGRSIGEGGLPRPVYNVQEEGRVVVSITVNPAGHVIATSIN 237
Query: 223 DVVGGTELVRR 233
+ R
Sbjct: 238 RLTNTVNSTLR 248
>gi|89054618|ref|YP_510069.1| TonB-like [Jannaschia sp. CCS1]
gi|88864167|gb|ABD55044.1| outer membrane transport energization protein TonB [Jannaschia sp.
CCS1]
Length = 330
Score = 47.2 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 22/223 (9%), Positives = 50/223 (22%), Gaps = 9/223 (4%)
Query: 33 ISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTH 92
+++ V+ I + + S+ + S T +
Sbjct: 105 PDITDVVEVE-ITAAPTDAQPSDAEADVAAAITPSTIAVVPVQPSRPVPVQPTVTPTPSV 163
Query: 93 ATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTV 152
A + + + L P + ++ + I T
Sbjct: 164 AQPTAAESPTDVMVAEDEVALTPLSSPRPRTRPEGLAPPPPAASGNAANNATRGSDIGTE 223
Query: 153 VVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQ 212
++ + V R+ V + F++
Sbjct: 224 AASATATTPTAQPAPQPGNAADIANYPGQVLRRISRAGRPRVRHTGAD---VVISFRIGS 280
Query: 213 KGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPST 255
G + G G E L + V ++ F P+
Sbjct: 281 GGHLAGLSVARSSGNPE-----LDQAGLSIVQRAAPFPPPPTG 318
>gi|330862407|emb|CBX72566.1| hypothetical protein YEW_HJ33260 [Yersinia enterocolitica W22703]
Length = 239
Score = 47.2 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 27/249 (10%), Positives = 66/249 (26%), Gaps = 31/249 (12%)
Query: 7 LAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKG 66
+ + + LH + + ++ + ++ + P +G
Sbjct: 1 MLLGVGLH-LLAAAFMLGWINKMAPQGVLPPAVMIELT-------LYQQAKSVPREIPQG 52
Query: 67 SSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQ 126
Q D + E E S+ E + + + P +
Sbjct: 53 LLQSMAAPDDAPPEK----------WLEELPKLTHSAKGTHAIRPEKVVQKKKIEPTKPR 102
Query: 127 KISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRV 186
+ L ++ + + K + +S + V +
Sbjct: 103 T-------DTPLPVVAEKAAPTTSAPLPGERHKNTATFSSDASAAISGKAAWQSDVLAHL 155
Query: 187 IANWNIPSDF-KRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIK 245
P + + + + F ++ KG VL G +ML A + +
Sbjct: 156 SRYKRYPREALRYRLEGISHVRFVVDHKGKVLTAELFASSGA-----KMLDREAMILISR 210
Query: 246 SQAFRLSPS 254
+Q + P+
Sbjct: 211 AQPLPIPPA 219
>gi|315634714|ref|ZP_07889998.1| TolA colicin import membrane protein [Aggregatibacter segnis ATCC
33393]
gi|315476662|gb|EFU67410.1| TolA colicin import membrane protein [Aggregatibacter segnis ATCC
33393]
Length = 371
Score = 47.2 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 18/126 (14%), Positives = 39/126 (30%), Gaps = 12/126 (9%)
Query: 147 KSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKM 206
+I + + +V + + + RF +
Sbjct: 254 SAIKGGNANKQGSQGAGASMGAGDGGKTGSAYAGVVYSSIKPYFR---GDTRFIGKVCDI 310
Query: 207 HFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFR--LSPSTYKSWRNITL 264
++ G +L G + L A A+ +++ R +P Y+ +++ TL
Sbjct: 311 KMEIASDGTILSYE--KKSGPND-----LCAAALNAIEQAKKMRRAPTPEEYEMFKSFTL 363
Query: 265 FFVPSK 270
F P K
Sbjct: 364 GFDPRK 369
>gi|313673839|ref|YP_004051950.1| tonb family protein [Calditerrivibrio nitroreducens DSM 19672]
gi|312940595|gb|ADR19787.1| TonB family protein [Calditerrivibrio nitroreducens DSM 19672]
Length = 252
Score = 47.2 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 23/228 (10%), Positives = 63/228 (27%), Gaps = 19/228 (8%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPV 61
RL + S I H+ + L + + + V + E+ + I++ +
Sbjct: 8 RLPAFIIFSTIFHIFIIAYLKISLP--EADDVKTNRTIFVTLVNKENSPPDFREGIKKKI 65
Query: 62 VQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVS 121
+NE ++ A K +
Sbjct: 66 DST----------------KNKEILKDMPPIYAKNERYPANQDTLINANKNEPVQLDKTD 109
Query: 122 PYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAI 181
K+ + ++ ++ + KKE + ++ K ++
Sbjct: 110 QEKKEIPTAHEEPKKIENNEVETNSTHQKSMNIMTSKKEHIETYTENKPKSFNIEEYEKY 169
Query: 182 VRNRVIANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKINVDVVGGT 228
+ ++ P ++ + + ++ +N G + V G +
Sbjct: 170 ILQKIKDMIEYPLLARKRGIEGDMLVNVTINTSGELKKVNIVKSSGYS 217
>gi|312601398|gb|ADQ90653.1| hypothetical protein MHP168_451 [Mycoplasma hyopneumoniae 168]
Length = 736
Score = 47.2 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 20/177 (11%), Positives = 50/177 (28%), Gaps = 2/177 (1%)
Query: 33 ISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTH 92
++ + + N N D S K + S E + + T
Sbjct: 45 LTISPSIILKNNPNTDNFSPVANTDYIQPPPKKEVPEAPKPTPPSETEKKPVYIPEIPTV 104
Query: 93 ATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTV 152
+ + + +A K + +K Q + + +
Sbjct: 105 KKTDIKPEINLEEKSKAKKNETAAIIIAPTILPNPPKSDLSKNQPAPAGAQTVVPKEEPI 164
Query: 153 VVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQ 209
+ RP + + K ++ R S + ++ + + +K R++ H +
Sbjct: 165 ITRPRQNAPIPKKDEYQRVD-LSGKYGSAIQTLIQRT-RYNISARTTEKNRIEQHIE 219
>gi|296438923|gb|ADH21076.1| histone H1-I [Chlamydia trachomatis E/11023]
Length = 235
Score = 47.2 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 19/147 (12%), Positives = 46/147 (31%)
Query: 7 LAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKG 66
L S+I+H+ +L+F+ + +S + V ++ +P+ +
Sbjct: 10 LCASIIIHIALGGMLFFSAPQKKKPRLSPFKERIVALPPEPKITTTLQTPSPQPIRKPVK 69
Query: 67 SSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQ 126
++ + + K + + + K + LK+ A L ++ +
Sbjct: 70 NAPAPEKKAAKPPAISNPQKSPQKPNKASPTPRNETPEKKQATLKKLAQLANQLAEEGET 129
Query: 127 KISKATNKEQDLQGISFAEKKSIDTVV 153
+ S Q E S
Sbjct: 130 QESHIAQFSWPAQAQVLTENTSYQQDA 156
>gi|163760178|ref|ZP_02167261.1| hypothetical protein HPDFL43_07949 [Hoeflea phototrophica DFL-43]
gi|162282577|gb|EDQ32865.1| hypothetical protein HPDFL43_07949 [Hoeflea phototrophica DFL-43]
Length = 335
Score = 47.2 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 16/189 (8%), Positives = 46/189 (24%), Gaps = 4/189 (2%)
Query: 42 DNIYNEDYHSSKYKKIEEPVVQFKGSS-QENLVRDFSVQENGDRFSDQTKTHATENETKR 100
+ + +S + + + + V + E A + +
Sbjct: 111 EETPDLMTTASALQPLMPVTEEPALVALPPEPVASEAPAEIAAVSPVNEIKPAEPDIPQP 170
Query: 101 SSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKE 160
++ + V+P + T
Sbjct: 171 ANVPVPVARPEPPETRVAQVTPPRPAPKKTEEKRATAKPKARGDGGAQRTTASRSA--SG 228
Query: 161 LLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGK 219
+ ++ + V +++ + P + KR + + V + F ++ G V
Sbjct: 229 SATAKRNTAAGNAAVSNYPGKVASKLRRSLRYPREAKRERIRGEVVVSFSVSANGGVSRV 288
Query: 220 INVDVVGGT 228
G +
Sbjct: 289 RIARSSGHS 297
>gi|88861315|ref|ZP_01135946.1| putative TolA protein [Pseudoalteromonas tunicata D2]
gi|88816694|gb|EAR26518.1| putative TolA protein [Pseudoalteromonas tunicata D2]
Length = 312
Score = 46.8 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 24/228 (10%), Positives = 77/228 (33%), Gaps = 14/228 (6%)
Query: 46 NEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSK 105
E+ + ++ + Q+ L + + Q + +
Sbjct: 94 AENAKKQREEEARRIKKLEQQRKQKELEKKEADVAAAQAQKKQQDEQKKAKQAEDEKLKS 153
Query: 106 GEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKV 165
+ A A + K + + + + +++ + +++ + +
Sbjct: 154 QKAAQDALAERKKQEEALKKAEQERLKKEAEAKAEAERKRRQAQEEQMLQEQLAQEQAAR 213
Query: 166 EKSSRKRIPSQ--DAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVD 223
++ R+++ ++ A+++ R+ N K + K++ +L G V ++
Sbjct: 214 NRAKRQQVLTEVEKYQAMIQARIQQNLLQDEKMKGKQ---CKVNIKLAFNGLVTQVESL- 269
Query: 224 VVGGTELVRRMLRENARKAVIKSQAFRLSPST--YKSWRNITLFFVPS 269
+++ E +A+ ++ +S ++ +NI L F P
Sbjct: 270 ------GGDKLVCEAVIRAIRMAETLPVSKDKDVFEQLKNINLTFKPE 311
>gi|254522570|ref|ZP_05134625.1| TonB family protein [Stenotrophomonas sp. SKA14]
gi|219720161|gb|EED38686.1| TonB family protein [Stenotrophomonas sp. SKA14]
Length = 237
Score = 46.8 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 21/210 (10%), Positives = 58/210 (27%), Gaps = 12/210 (5%)
Query: 56 KIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESAL 115
P + L+ + + + T + A + + + S +
Sbjct: 32 PPSLPPPEQDVRISLRLLAPATPPQPVEERQADTPSQAQQARASQPTKSPPPPTPTAARE 91
Query: 116 LRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPS 175
+ S ++ A + + S
Sbjct: 92 GELAASET------GGRGRQPLPIAPPAAATDASPAPASITAAPPAPDAPPADFQAGAAS 145
Query: 176 QDAIAIVRNRVIANWNIPSDFK-RFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRM 234
A + R+ P+ + R ++ + ++++G +L G + M
Sbjct: 146 DQWEARLMARLERYRYYPAAARSRRQQGTAWVRASIDREGRLLALRLEQSSG-----QPM 200
Query: 235 LRENARKAVIKSQAFRLSPSTYKSWRNITL 264
L + A + ++Q P+ K+ + + +
Sbjct: 201 LDDAALQTFRRAQPLPPIPAELKAPQELVV 230
>gi|154174575|ref|YP_001408724.1| TonB family protein [Campylobacter curvus 525.92]
gi|153793113|gb|ABS50403.1| TonB family C- domain protein [Campylobacter curvus 525.92]
Length = 290
Score = 46.8 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 19/176 (10%), Positives = 45/176 (25%), Gaps = 4/176 (2%)
Query: 6 GLAISMILHVMFLLLLYFNFNV--QLLVPISRREMLSVDNIYNE--DYHSSKYKKIEEPV 61
IS LH + + L++ F L + ++++ D ++ + +
Sbjct: 13 SFFISAALHGLAVYLIFATFKSDIFLAEKNEAPKAMAINLNQISPNDTSNNDMQASQVQT 72
Query: 62 VQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVS 121
+ + V+ + + + E + K K
Sbjct: 73 PESNAAEAMQEVKQEEPPKEQVKEPEPVAQIQKPKEPEPIKEQKPAPKPKPKPKKERVKE 132
Query: 122 PYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQD 177
P + Q L + T P + L + + S +
Sbjct: 133 PLPEPAPRPPERIAQPLPTPTKEPSPMPPTPASAPSSQNLANNEAVNQGGSRQSGE 188
>gi|114326705|ref|YP_743862.1| tonB protein [Granulibacter bethesdensis CGDNIH1]
gi|114314879|gb|ABI60939.1| tonB protein [Granulibacter bethesdensis CGDNIH1]
Length = 296
Score = 46.8 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 32/255 (12%), Positives = 68/255 (26%), Gaps = 25/255 (9%)
Query: 11 MILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQE 70
+ LH + V + + +D +
Sbjct: 55 LGLHAALFAYVSQLHPVPIGDSNDSPPAVMIDL-------------------PPAAPTPS 95
Query: 71 NLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISK 130
D + + T+ + S + P P +
Sbjct: 96 APPPDDMTRPQLPPQPEVQPLQETQKLPEIPPSPAPSPEAVLPPPPKAPPVPQHPKLKPV 155
Query: 131 ATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANW 190
K + +Q + +++ P + +S R V ++
Sbjct: 156 QPPKPKPVQKPAEHVEENPRDAPPAPAAPPSPDAAQAASAARQAQASWYGRVAGHLLRFK 215
Query: 191 NIPSDFK-RFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAF 249
P + R ++ VK+ F +++ G V G + G +L E AR+ + ++Q
Sbjct: 216 RYPRMAELRHEEGVVKVRFSVDEAGHVTGFTILTSSG-----HELLDEGAREWIDRAQPL 270
Query: 250 RLSPSTYKSWRNITL 264
P R + L
Sbjct: 271 PPPPQEISHGRPMVL 285
>gi|77461778|ref|YP_351285.1| TonB-like [Pseudomonas fluorescens Pf0-1]
gi|77385781|gb|ABA77294.1| outer membrane transport energization protein TonB [Pseudomonas
fluorescens Pf0-1]
Length = 248
Score = 46.8 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 24/200 (12%), Positives = 50/200 (25%), Gaps = 6/200 (3%)
Query: 58 EEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLR 117
P ++ + + T + E E A+ +
Sbjct: 34 ARPPIELPPQAMMVELAPVPAPPPPAPPKVVTPPQPPAPVEELPIPKLAEAPKAEIAVQK 93
Query: 118 MPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQD 177
P K + EK + P +K S +
Sbjct: 94 PKPKPKPKPPKPIEKKLPDPPKEKPSEEKPADTQPTQAPTEKSAQPAPGPSPAQMAAKAS 153
Query: 178 AIAIVRNRVIANWNIPSDF-KRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLR 236
+ + P+ R K+ ++ F ++ +G VL V G + L
Sbjct: 154 WQGTLLAHLAKYKKYPASAQARGKEGLNRLRFVVDGEGNVLSFELVGRSGNAD-----LD 208
Query: 237 ENARKAVIKSQAFRLSPSTY 256
+ + ++Q P+
Sbjct: 209 RATLEMIRRAQPLPKPPADM 228
>gi|301164702|emb|CBW24261.1| putative TonB exported protein [Bacteroides fragilis 638R]
Length = 280
Score = 46.8 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 25/251 (9%), Positives = 62/251 (24%), Gaps = 21/251 (8%)
Query: 1 MRLEN-----GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYK 55
M ++ G ++++HV + LL + + P + V + + D Y
Sbjct: 1 MNIKRKSEYIGALGALLVHVAIIALLIL-VSFAIPHPDEEAGGVPV-MMGDVDAAYGNYD 58
Query: 56 KIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESAL 115
V+ + V+ + + + K + A K
Sbjct: 59 PSTMVDVEVLPEEVPAPQPEPEVETEQEMITQTEEETVVVKPKAEPKKEKPKVAKKPEKT 118
Query: 116 LRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPS 175
+ K KA + + + + + + +
Sbjct: 119 PEEKAAEAKKLAEEKAERERKAAAEAASKRVAGAFGKGSQMGGSKGTATSGEGVEGSKDG 178
Query: 176 QDAIAIVRNRVIANWNIPSDFKRF-------------KKLRVKMHFQLNQKGFVLGKINV 222
+ ++ V + ++ RV + +N G V+
Sbjct: 179 NSSTGA-KSGVGGYGTFNLGGRSIGEGGLPRPVYNVQEEGRVVVSITVNPAGHVIATSIN 237
Query: 223 DVVGGTELVRR 233
+ R
Sbjct: 238 RLTNTVNSTLR 248
>gi|255348979|ref|ZP_05380986.1| histone H1-I [Chlamydia trachomatis 70]
gi|255503518|ref|ZP_05381908.1| histone H1-I [Chlamydia trachomatis 70s]
gi|255507196|ref|ZP_05382835.1| histone H1-I [Chlamydia trachomatis D(s)2923]
gi|296435204|gb|ADH17382.1| histone H1-I [Chlamydia trachomatis E/150]
Length = 235
Score = 46.8 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 19/147 (12%), Positives = 46/147 (31%)
Query: 7 LAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKG 66
L S+I+H+ +L+F+ + +S + V ++ +P+ +
Sbjct: 10 LCASIIIHIALGGMLFFSAPQKKKPRLSPFKERIVALPPEPKITTTLQTPSPQPIRKPVK 69
Query: 67 SSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQ 126
++ + + K + + + K + LK+ A L ++ +
Sbjct: 70 NAPAPEKKAAKPPAISNPQKSPQKPNKASPTPRNETPEKKQATLKKLAQLANQLAEEGET 129
Query: 127 KISKATNKEQDLQGISFAEKKSIDTVV 153
+ S Q E S
Sbjct: 130 QESHIAQFSWPAQAQVLTENTSYQQDA 156
>gi|166154812|ref|YP_001654930.1| histone H1-I [Chlamydia trachomatis 434/Bu]
gi|301336090|ref|ZP_07224334.1| histone H1-I [Chlamydia trachomatis L2tet1]
gi|165930800|emb|CAP04298.1| histone H1-I [Chlamydia trachomatis 434/Bu]
Length = 235
Score = 46.8 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 19/147 (12%), Positives = 46/147 (31%)
Query: 7 LAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKG 66
L S+I+H+ +L+F+ + +S + V ++ +P+ +
Sbjct: 10 LCASIIIHIALGGMLFFSAPQKKKPRLSPFKERIVALPPEPKITTTLQTPSPQPIRKPVK 69
Query: 67 SSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQ 126
++ + + K + + + K + LK+ A L ++ +
Sbjct: 70 NAPAPEKKAAKPPAISNPQKSPQKPNKASPTPRNETLEKKQATLKKLAQLANQLAEEAET 129
Query: 127 KISKATNKEQDLQGISFAEKKSIDTVV 153
+ S Q E S
Sbjct: 130 QESHIAQFSWPAQAQVLTENTSYQQDA 156
>gi|163846361|ref|YP_001634405.1| helicase [Chloroflexus aurantiacus J-10-fl]
gi|222524126|ref|YP_002568597.1| helicase [Chloroflexus sp. Y-400-fl]
gi|163667650|gb|ABY34016.1| helicase [Chloroflexus aurantiacus J-10-fl]
gi|222448005|gb|ACM52271.1| helicase [Chloroflexus sp. Y-400-fl]
Length = 1007
Score = 46.8 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 12/161 (7%), Positives = 39/161 (24%), Gaps = 2/161 (1%)
Query: 29 LLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQ 88
P + + S + S++ + + + +
Sbjct: 716 SEPPAREPPVREP-PVREPPVRSEPPVREPPAREPPARSAEPPVREPPAREPSVRSEPPV 774
Query: 89 TKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKE-QDLQGISFAEKK 147
+ E + ++ E PV ++ + ++ +
Sbjct: 775 REPPVREPPARSEPPAREPSIRSEPPAREPPVREPPVREPPVRSEPSVREPPAREPPARS 834
Query: 148 SIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIA 188
+ V P ++ + + + S+ + R R
Sbjct: 835 AEPPVREPPAREPSVRSEPPAREPPVRSERSADAQRGRYNR 875
Score = 44.1 bits (102), Expect = 0.020, Method: Composition-based stats.
Identities = 21/200 (10%), Positives = 57/200 (28%), Gaps = 13/200 (6%)
Query: 26 NVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRF 85
+V+ P+ + + + EP ++ + ++E VR+ V+E R
Sbjct: 767 SVRSEPPVREPPV--------REPPARSEPPAREPSIRSEPPAREPPVREPPVREPPVRS 818
Query: 86 SDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAE 145
+ RS+ + +R + S+ + Q +
Sbjct: 819 EPSVREPPAREPPARSAEPPVREPPAREPSVRSEPPAREPPVRSERSADAQRGRYNRPGG 878
Query: 146 KK-----SIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFK 200
+ + + ++ +A +R R N P+ +R
Sbjct: 879 RHSGRRVPDQPEPPEAPAVPEPPTDDSPAASVPDAEAILARLRQRRERNGPAPTSRERRP 938
Query: 201 KLRVKMHFQLNQKGFVLGKI 220
+ + + + ++
Sbjct: 939 EGQQPLEPRFQPGDRIICMP 958
>gi|166155687|ref|YP_001653942.1| histone H1-I [Chlamydia trachomatis L2b/UCH-1/proctitis]
gi|165931675|emb|CAP07252.1| histone H1-I [Chlamydia trachomatis L2b/UCH-1/proctitis]
Length = 235
Score = 46.8 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 19/147 (12%), Positives = 46/147 (31%)
Query: 7 LAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKG 66
L S+I+H+ +L+F+ + +S + V ++ +P+ +
Sbjct: 10 LCASIIIHIALGGMLFFSAPQKKKPRLSPFKERIVALPPEPKITTTLQTPSPQPIRKPVK 69
Query: 67 SSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQ 126
++ + + K + + + K + LK+ A L ++ +
Sbjct: 70 NAPAPEKKAAKPPAISNPQKSPQKPNKASPTPRNETLEKKQATLKKLAQLANQLAEEAET 129
Query: 127 KISKATNKEQDLQGISFAEKKSIDTVV 153
+ S Q E S
Sbjct: 130 QESHIAQFSWPAQAQVLTENTSYQQDA 156
>gi|74318594|ref|YP_316334.1| TonB-like protein [Thiobacillus denitrificans ATCC 25259]
gi|74058089|gb|AAZ98529.1| TonB-like protein [Thiobacillus denitrificans ATCC 25259]
Length = 294
Score = 46.8 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 29/261 (11%), Positives = 71/261 (27%), Gaps = 11/261 (4%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPV 61
R+ L S +H M L + N +L + + V + + V
Sbjct: 18 RMALALLASAAVHGMALSTQFVQINPKLFEDPNLP--MEVVLVNARSTDAPLKPDALAQV 75
Query: 62 VQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVS 121
G + + R S + + A + + + +
Sbjct: 76 NLAGGGNTDEDRRLKSPLPASPKTQRGGEEAALQARVRELEQQARNLLTQLQPDAAPQDA 135
Query: 122 PYDKQKISKATNKEQ-DLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIA 180
+ + Q +LQ A+ ++ + +K ++ K +
Sbjct: 136 QTQPAPPAPTVDASQLNLQAREMAQLQARISQQWDEYQKRPKRAFVGANVKEYAFARYVE 195
Query: 181 IVRNRVIANWNIPSDFKRFKK---LRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRE 237
+V N+ ++ +K+ + G + G ++L
Sbjct: 196 DWVAKVERVGNLNYPEAARRQGIYGSLKLTVSIYANGKIEKIEVDRSSGS-----KVLDA 250
Query: 238 NARKAVIKSQAFRLSPSTYKS 258
A + V + + P+ +
Sbjct: 251 AAVRIVELAAPYAPFPADMQK 271
>gi|320538136|ref|ZP_08038031.1| gram-negative bacterial TonB protein [Treponema phagedenis F0421]
gi|320144953|gb|EFW36674.1| gram-negative bacterial TonB protein [Treponema phagedenis F0421]
Length = 225
Score = 46.8 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 22/161 (13%), Positives = 43/161 (26%), Gaps = 6/161 (3%)
Query: 92 HATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDT 151
++K E K + + + D + E
Sbjct: 50 PQISERPSAPRAAKPEPVKKPIKKKTVVQPKTPALVPAPPIEQLADTVDNAPVESTEAAP 109
Query: 152 VVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFK-RFKKLRVKMHFQL 210
V D + + + D A++ R+ P + R ++ V + +
Sbjct: 110 FDVDGDTFDTELADGSGTGTGTGAIDFKALILQRIEQKKIYPKAARKRGQEGAVTVSITV 169
Query: 211 NQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRL 251
+ G V+ V L E A +V + F L
Sbjct: 170 LKSGEVVQADIVSPCR-----YAFLNEAALASVRAASPFPL 205
>gi|197119874|ref|YP_002140301.1| TonB-like periplasmic protein [Geobacter bemidjiensis Bem]
gi|197089234|gb|ACH40505.1| TonB-like periplasmic protein, putative [Geobacter bemidjiensis
Bem]
Length = 258
Score = 46.8 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 21/263 (7%), Positives = 63/263 (23%), Gaps = 25/263 (9%)
Query: 7 LAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKG 66
A+S + H++ L++ + + + + VD + + P
Sbjct: 16 FALSFVCHLVVFLIIA-KWQLSPELHPDDTPVTYVDMVTL---------PVASPQAGTPA 65
Query: 67 SSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQ 126
+ E + K ++ + + +SA +
Sbjct: 66 PAAEAEKEAAPPPPAAPAAPAMVQPAKPAKPAKPAAKAPAAEPKGKSAPANPAAQAQEFN 125
Query: 127 KISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRV 186
+ + + + ++ + S ++
Sbjct: 126 ERLAKLERVAQDKRQAEVMERLRKKGSQQTGMPGAKGTEAGSDYPSYLQSRLKDALK--- 182
Query: 187 IANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKS 246
+ K +V ++ G + G + + +AV +
Sbjct: 183 ------EVMVSQTKSPQVIATITVSGDGRIAEYHVEKGSGD-----PLFDDAVHRAVTLA 231
Query: 247 QAFRLSPSTYKSWRNITLFFVPS 269
+ P ++ + F P
Sbjct: 232 GKSLVPPPGGAPFKRM-FRFRPE 253
>gi|326560193|gb|EGE10581.1| hypothetical protein E9G_06384 [Moraxella catarrhalis 7169]
gi|326564932|gb|EGE15134.1| hypothetical protein E9M_00251 [Moraxella catarrhalis 46P47B1]
gi|326567862|gb|EGE17963.1| hypothetical protein E9O_00030 [Moraxella catarrhalis 12P80B1]
Length = 266
Score = 46.8 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 31/243 (12%), Positives = 62/243 (25%), Gaps = 29/243 (11%)
Query: 7 LAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKG 66
+ S++LH + ++ + P + + V +
Sbjct: 21 ILASVLLHTVIIIAVAAPLITPPTKPNTTIQTALV-------------------GQEAFN 61
Query: 67 SSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQ 126
+ L + Q + + A +N+ + + + + Y
Sbjct: 62 RVKTALSNHHADQNKPTATNTSSTITANDNDNAFIQAQNQHRYHPQVSTSATTTQAYHPP 121
Query: 127 KISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRV 186
S + S +S+ R AI V++R+
Sbjct: 122 PNSAPFESNSPNIQNQPTNAHAKLAEYSNHVSDLEQSNHTESTPSRAQINAAITSVKHRI 181
Query: 187 IANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKS 246
A W + +NQ+G V GG R E+ AV +
Sbjct: 182 EAIWQRYPKQP---NQTITFQVNMNQQGDVTSIQF----GGGHPDLR---ESVEAAVYAA 231
Query: 247 QAF 249
F
Sbjct: 232 APF 234
>gi|325293527|ref|YP_004279391.1| hypothetical protein AGROH133_07593 [Agrobacterium sp. H13-3]
gi|325061380|gb|ADY65071.1| hypothetical protein AGROH133_07593 [Agrobacterium sp. H13-3]
Length = 321
Score = 46.8 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 16/146 (10%), Positives = 42/146 (28%), Gaps = 1/146 (0%)
Query: 9 ISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSS 68
+S++LH+ + + F ++ P E +SVD + + + K +
Sbjct: 18 VSVLLHLAVVAIFLFELPERIAEP-QEPESISVDLVPPPEEKKPEEAKPPAAEQAKQEKP 76
Query: 69 QENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKI 128
Q E T + + E ++ + +
Sbjct: 77 QPPPPPPAPPAEEPKPSPPLQATLPAIAMRPEETQADPEDKPGKAEEADKTEPSKEPESQ 136
Query: 129 SKATNKEQDLQGISFAEKKSIDTVVV 154
+ T +++ + + K+
Sbjct: 137 PEKTAEDKPAPSAANGDLKASAEQGE 162
>gi|315499396|ref|YP_004088199.1| tonb family protein [Asticcacaulis excentricus CB 48]
gi|315417408|gb|ADU14048.1| TonB family protein [Asticcacaulis excentricus CB 48]
Length = 224
Score = 46.8 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 18/193 (9%), Positives = 46/193 (23%), Gaps = 8/193 (4%)
Query: 74 RDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATN 133
D + + A + V +
Sbjct: 33 SAPEAPPEPDALTIEMVRLAPPQPPSERPPGPVQTEATARKAPPRQVLERVPDASVEPLR 92
Query: 134 KEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIP 193
+ +K D + + S D A + + + P
Sbjct: 93 VPPPEEAAPL--EKPSDARPAPATTAPASKPAPPAPKAVSASPDWRARLLAHIEQHKRYP 150
Query: 194 SDFK-RFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLS 252
++ + R ++ + F ++ +G VL + + G L A + + + +
Sbjct: 151 AEARIRRQQGAAVVCFTVDAQGKVLSRRLLRSSG-----VPSLDAEALRVLRAASPLPVP 205
Query: 253 PSTYKSWRNITLF 265
+ I +
Sbjct: 206 AEAGLQGQEIVVV 218
>gi|183233370|ref|XP_650099.2| auxin efflux carrier family protein [Entamoeba histolytica
HM-1:IMSS]
gi|169801615|gb|EAL44713.2| auxin efflux carrier family protein, putative [Entamoeba
histolytica HM-1:IMSS]
Length = 523
Score = 46.8 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 22/174 (12%), Positives = 48/174 (27%), Gaps = 10/174 (5%)
Query: 9 ISMILHVMFLLLLYFNFNVQLLV-------PISRREMLSVDNIYNEDYHSSKYKKIEEPV 61
IS ++ + YF+ + I ++++ E+ + K
Sbjct: 150 ISFMVTFFIIGYDYFSLTTREPENKGKNDSQIKEPGEVAIEM---EETQPVEKKDEVSKE 206
Query: 62 VQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVS 121
+ K S++ + + D+ E TK + E +P
Sbjct: 207 FEVKQSTKSEEISKDIETPKPSKEEDKNIPKEDETLTKEDENIPKEDETLTKEDENIPKE 266
Query: 122 PYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPS 175
K + +++ I K D+ V +SS+
Sbjct: 267 DKTLNKEGSTNIQTEEMIKIDKTSSKEEDSKVDETISNNKKDMSGESSKINKMK 320
>gi|257466496|ref|ZP_05630807.1| TonB protein [Fusobacterium gonidiaformans ATCC 25563]
gi|315917653|ref|ZP_07913893.1| TonB protein [Fusobacterium gonidiaformans ATCC 25563]
gi|313691528|gb|EFS28363.1| TonB protein [Fusobacterium gonidiaformans ATCC 25563]
Length = 245
Score = 46.8 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 24/245 (9%), Positives = 70/245 (28%), Gaps = 28/245 (11%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVD-NIYNEDYHSSKYKKIEEPV 61
++ L +S +H++ + Y + + + +++SV + N +
Sbjct: 1 MKKYLVLSFCIHILCFIGFYHHEMHKGEEKLPLNQVISVSFVVENPPPSDNPGSPNVADK 60
Query: 62 VQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVS 121
+ K + K + K + ++ +S +
Sbjct: 61 ILEKKENS-----------------TNEKPKEQPKKEKPKKEEQVKEKTFDSKMATKDAK 103
Query: 122 PYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAI 181
K++ + + + + + D + + + +
Sbjct: 104 EVKKEESAAVASDSHEKESSDSGKASGSDNPFYGSNFQANGDGSYTALSSEGIN----YQ 159
Query: 182 VRNRVIANW-NIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENAR 240
+ N V ++ + +++ VK+ F + KG V + +
Sbjct: 160 ILNEVEPDYPSQAESIGYDQRVSVKVKFLVGLKGNVENIQIIKSHKKLG-----FDDEVM 214
Query: 241 KAVIK 245
KA+ K
Sbjct: 215 KAIKK 219
>gi|253566380|ref|ZP_04843834.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
gi|251945484|gb|EES85922.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
Length = 280
Score = 46.8 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 25/251 (9%), Positives = 62/251 (24%), Gaps = 21/251 (8%)
Query: 1 MRLEN-----GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYK 55
M ++ G ++++HV + LL + + P + V + + D Y
Sbjct: 1 MNIKRKSEYIGALGALLVHVAIIALLIL-VSFAIPHPDEEAGGVPV-MMGDVDAAYGNYD 58
Query: 56 KIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESAL 115
V+ + V+ + + + K + A K
Sbjct: 59 PSTMVDVEVLPEEVPAPQPEPEVETEQEMITQTEEETVVVKPKAEPKKEKPKVAKKLEKT 118
Query: 116 LRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPS 175
+ K KA + + + + + + +
Sbjct: 119 PEEKAAEAKKLAEEKAERERKAAAEAASKRVAGAFGKGSQMGGSKGTATSGEGVEGSKDG 178
Query: 176 QDAIAIVRNRVIANWNIPSDFKRF-------------KKLRVKMHFQLNQKGFVLGKINV 222
+ ++ V + ++ RV + +N G V+
Sbjct: 179 NSSTGA-KSGVGGYGTFNLGGRSIGEGGLPRPVYNVQEEGRVVVSITVNPAGHVIATSIN 237
Query: 223 DVVGGTELVRR 233
+ R
Sbjct: 238 RLTNTVNSTLR 248
>gi|182415136|ref|YP_001820202.1| protein TolA [Opitutus terrae PB90-1]
gi|177842350|gb|ACB76602.1| protein TolA [Opitutus terrae PB90-1]
Length = 306
Score = 46.8 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 23/199 (11%), Positives = 48/199 (24%), Gaps = 10/199 (5%)
Query: 44 IYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSS 103
I + P + + + R K E K
Sbjct: 93 IQRAPERKAPVVAKATPAPEEVKIRDFSKDVTRISNKRQARLEAAEKKRREAAERKAKEE 152
Query: 104 SKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLS 163
+ Q + ++ R S K S + I +K
Sbjct: 153 ALKSQRMTKADFDRQNKS---KPSPSAKGGSSVKVARIDAQGIAKGVIGGSTANKVGGAG 209
Query: 164 KVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVD 223
+ + A++ ++ + L V++ ++ G + G +D
Sbjct: 210 GTALTRAEGDAIDAYTALLARKIKTELDEKPGV--GAGLIVEVEVRILADGTLTGFRIID 267
Query: 224 VVGGTELVRRMLRENARKA 242
G E + R+A
Sbjct: 268 SSGSQE-----FDQAVREA 281
>gi|72084351|ref|XP_783196.1| PREDICTED: similar to TPR repeat-containing protein
[Strongylocentrotus purpuratus]
gi|115945974|ref|XP_001189823.1| PREDICTED: similar to TPR repeat-containing protein
[Strongylocentrotus purpuratus]
Length = 2000
Score = 46.8 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 22/148 (14%), Positives = 44/148 (29%), Gaps = 10/148 (6%)
Query: 24 NFNVQLLVPISRREMLSVDNIYNEDYHSSKY-------KKIEEPVVQFKGSSQENLVRDF 76
+ P V++ N+ + + P V S + V
Sbjct: 94 SSPAPENPPTDSPP---VESSPNDGLAPAPESYRSQESPDADTPTVDTSPSENKLQVNTA 150
Query: 77 SVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQ 136
+ + D + E+K SS E + +ES+ +P ++ ++K++
Sbjct: 151 AESSHPDSSPLEIPQENVPKESKPVESSGKESSPQESSPPELPRENVPQESKPVKSSKKE 210
Query: 137 DLQGISFAEKKSIDTVVVRPDKKELLSK 164
Q S + V E K
Sbjct: 211 SSQPESSPPGLPQENVPQETKPLEGSGK 238
>gi|85714771|ref|ZP_01045757.1| TonB like protein [Nitrobacter sp. Nb-311A]
gi|85715431|ref|ZP_01046413.1| TonB like protein [Nitrobacter sp. Nb-311A]
gi|85717556|ref|ZP_01048500.1| TonB like protein [Nitrobacter sp. Nb-311A]
gi|85695637|gb|EAQ33551.1| TonB like protein [Nitrobacter sp. Nb-311A]
gi|85697852|gb|EAQ35727.1| TonB like protein [Nitrobacter sp. Nb-311A]
gi|85698257|gb|EAQ36128.1| TonB like protein [Nitrobacter sp. Nb-311A]
Length = 264
Score = 46.8 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 25/241 (10%), Positives = 66/241 (27%), Gaps = 23/241 (9%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
A ++ +H+ + L + I + + P
Sbjct: 18 SAAAALAIHLGCVALAVAQMQTDESAEDLGAPAIE---IGLDLSSPRREATDLPPGPDTD 74
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
S+ + + E T T + + + + + ++ S +
Sbjct: 75 ASTASPALAEQKAVEKETDLPKDTPTETDDPDRIVTENESKKPVEEDPEKAEKQTSASQE 134
Query: 126 QKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNR 185
S+AT + ++ + + + R +
Sbjct: 135 SAASEATAMPSVENA--------------QESERSVAPQQGTGASARRIRATWQKELVAH 180
Query: 186 VIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIK 245
+ + P + + K ++ ++F L++ G V+ V G + + A V +
Sbjct: 181 LDKHKRYPPEHTQ-KNAKILINFVLDRLGHVVSVNIVKGSGD-----PVFDQAALAMVHR 234
Query: 246 S 246
S
Sbjct: 235 S 235
>gi|126463341|ref|YP_001044455.1| TonB family protein [Rhodobacter sphaeroides ATCC 17029]
gi|126105005|gb|ABN77683.1| TonB family protein [Rhodobacter sphaeroides ATCC 17029]
Length = 294
Score = 46.8 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 17/116 (14%), Positives = 37/116 (31%), Gaps = 9/116 (7%)
Query: 139 QGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKR 198
+ + A + V + + + A +R R+ + R
Sbjct: 171 REVKKAAAPPPQQAAAPTRSTGSAAAVASRGQVQNLTAKWGAEIRKRIQR----HTRGAR 226
Query: 199 FKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPS 254
+ V + ++Q G + G V G + + A +AV + F +P+
Sbjct: 227 GQAGEVTVRLTVSQGGALGGASVVRSSGNPR-----IDQLALRAVQSAGRFPAAPA 277
>gi|329963083|ref|ZP_08300863.1| TonB family domain protein [Bacteroides fluxus YIT 12057]
gi|328529124|gb|EGF56054.1| TonB family domain protein [Bacteroides fluxus YIT 12057]
Length = 276
Score = 46.8 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 29/229 (12%), Positives = 63/229 (27%), Gaps = 2/229 (0%)
Query: 6 GLAISMILHVMFL-LLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQF 64
G ++++HV F+ L+ F V ++ + K++ +
Sbjct: 17 GAIGAVLVHVAFIAFLILVGFTVPKPSEEDGMPVMLGEIPDASGMADPSLVKVDVIPEEV 76
Query: 65 KGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYD 124
+E +D QE + + K + E K+ + E+A + L
Sbjct: 77 APQVEEAAEQDIITQETEETVVLKPKAEPKKKEVKKPEKTAAEKAEEARKLAEAKAEKER 136
Query: 125 KQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRN 184
++ A + G +T + ++ R+
Sbjct: 137 REAEEAARKRVSGAFGKGAQMGSKGNTEGQGIQGSPKGNAPAGATSGTGGYGSFNLGGRS 196
Query: 185 RVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRR 233
P + + RV + +N G V+ R
Sbjct: 197 LGEGGLPRPIYNVQDEG-RVVVTITVNPAGHVIATSINRQTNTVNPALR 244
>gi|319790629|ref|YP_004152262.1| TonB family protein [Thermovibrio ammonificans HB-1]
gi|317115131|gb|ADU97621.1| TonB family protein [Thermovibrio ammonificans HB-1]
Length = 242
Score = 46.4 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 29/250 (11%), Positives = 60/250 (24%), Gaps = 31/250 (12%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
LA S+ +H L + ++ + + K E +
Sbjct: 11 SLAASLAIHAALLSVPAVR-EAFTAKVYQIVSVVPLTFDTAVESDLLGVKPSEGNSEKAP 69
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
+ + R S + + +T RS+S G QA+ S ++ +
Sbjct: 70 RKDENTVTRGRSSKARKNLLHAKTSNSKELKGPFRSNSKAGVQAVSGSRWIKTQAT---- 125
Query: 126 QKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNR 185
+ + + +RNR
Sbjct: 126 ---------------------GKGGRRLSLSAQVNTEEGRGTPKVASNRLVPYLIALRNR 164
Query: 186 VIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIK 245
++ W P V + + G + + +A AV
Sbjct: 165 IMERWKAPFYRSEKGSQSVIIALTIGASGKLRELEVERLSPD-----IAFNRSALSAVYS 219
Query: 246 SQAFRLSPST 255
++ F P
Sbjct: 220 AEPFPPLPKG 229
>gi|297587175|ref|ZP_06945820.1| conserved hypothetical protein [Finegoldia magna ATCC 53516]
gi|297575156|gb|EFH93875.1| conserved hypothetical protein [Finegoldia magna ATCC 53516]
Length = 4587
Score = 46.4 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 21/183 (11%), Positives = 47/183 (25%), Gaps = 19/183 (10%)
Query: 53 KYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKE 112
+ + EEP+++ K + QE + +E + + K + E + S K + KE
Sbjct: 432 EENQEEEPIIKKKETKQEVKSEPATPEERKQKAEEFDKALKDKKEEIKKSEDKKDANNKE 491
Query: 113 SALLRMPVSPYDKQKISKAT-----------NKEQDLQGISFAEKKSIDTVVVRPDKKEL 161
K+ K + K + V
Sbjct: 492 DNNKTTDKKEVSKETKGLLEGIKEFFGLTNLQKADRELKAILSVKANGLKEVQALLTSFE 551
Query: 162 LSKVEKSSRKRIPSQDAIAIVRNRVIA----NWNIPSDFKRF----KKLRVKMHFQLNQK 213
+ D ++ + N+N + + + + +
Sbjct: 552 AKYHLTQQEQAKLMDDNADAIKALIERDADKNFNPQMLLANSDQGLENKKFTIRTRFDTS 611
Query: 214 GFV 216
V
Sbjct: 612 TRV 614
>gi|192361603|ref|YP_001981409.1| TonB family C-terminal domain-containing protein [Cellvibrio
japonicus Ueda107]
gi|190687768|gb|ACE85446.1| TonB family C-terminal domain protein [Cellvibrio japonicus
Ueda107]
Length = 397
Score = 46.4 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 25/202 (12%), Positives = 64/202 (31%), Gaps = 16/202 (7%)
Query: 78 VQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQD 137
+ A+ + ++ K E +A++ P + T
Sbjct: 203 ATPVVAEVKSSSSKAASSAPREVAAIEKPEVPALAAAVIEKPTIELPAVPPAPVTQVTTA 262
Query: 138 LQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQD--AIAIVRNRVIANWNIPSD 195
+ A + E + + ++ + +V + PS
Sbjct: 263 AASSAPAVAAAKPAPAPIASDDEDDEDEGPALTAQSLLARQFYVSDILKKVFSKTRYPSR 322
Query: 196 F-KRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFR---- 250
+R ++ V++ ++++G +L + E +L AR+A+ +S F
Sbjct: 323 ALERGQEGSVRIAVVIDRQGNILS-----MNSLDESRHELLNREAREAIKRSAPFPEIPA 377
Query: 251 -LSPSTYKSWRNITLFFV-PSK 270
L + ++ + + F P +
Sbjct: 378 ALPGARFEF--TVPIRFTLPKQ 397
>gi|85713850|ref|ZP_01044839.1| TonB-like protein [Nitrobacter sp. Nb-311A]
gi|85698976|gb|EAQ36844.1| TonB-like protein [Nitrobacter sp. Nb-311A]
Length = 248
Score = 46.4 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 25/241 (10%), Positives = 66/241 (27%), Gaps = 23/241 (9%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
A ++ +H+ + L + I + + P
Sbjct: 2 SAAAALAIHLGCVALAVAQMQTDESAEDLGAPAIE---IGLDLSSPRREATDLPPGPDTD 58
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
S+ + + E T T + + + + + ++ S +
Sbjct: 59 ASTASPALAEQKAVEKETDLPKDTPTETDDPDRIVTENESKKPVEEDPEKAEKQTSASQE 118
Query: 126 QKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNR 185
S+AT + ++ + + + R +
Sbjct: 119 SAASEATAMPSVENA--------------QESERSVAPQQGTGASARRIRATWQKELVAH 164
Query: 186 VIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIK 245
+ + P + + K ++ ++F L++ G V+ V G + + A V +
Sbjct: 165 LDKHKRYPPEHTQ-KNAKILINFVLDRLGHVVSVNIVKGSGD-----PVFDQAALAMVHR 218
Query: 246 S 246
S
Sbjct: 219 S 219
>gi|160358754|sp|A2ASS6|TITIN_MOUSE RecName: Full=Titin; AltName: Full=Connectin
gi|123232571|emb|CAM24262.1| titin [Mus musculus]
gi|123232627|emb|CAM27059.1| titin [Mus musculus]
gi|123232651|emb|CAM23449.1| titin [Mus musculus]
Length = 35213
Score = 46.4 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 12/136 (8%), Positives = 29/136 (21%), Gaps = 5/136 (3%)
Query: 32 PISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDF---SVQENGDR--FS 86
P + E +V + K + P + E + + + +
Sbjct: 11944 PPKKPEATTVPVPKVQKTIPEKTRPEAPPKRPEARTVPETVPEKTRPMAPPKKPEATTLP 12003
Query: 87 DQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEK 146
+T+ K +A P + K + +
Sbjct: 12004 VPEVQETVPEKTRPVGPPKKPEATTVPVPEVQETIPEKTRPPKKPEATPVPVPEVQETVP 12063
Query: 147 KSIDTVVVRPDKKELL 162
+ V +
Sbjct: 12064 EKTRPVGPPKKPEATT 12079
Score = 42.6 bits (98), Expect = 0.065, Method: Composition-based stats.
Identities = 14/124 (11%), Positives = 33/124 (26%), Gaps = 6/124 (4%)
Query: 28 QLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDR--- 84
P+ E+ K + V + R + + +
Sbjct: 12048 PEATPVPVPEVQETVPEKTRPVGPPKKPEATTVSVPEVQETIPEKTRPAAPPKKPEATAV 12107
Query: 85 ---FSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGI 141
++T+ A + ++ E ++P P K + T E+ + I
Sbjct: 12108 PETIPEKTRPEAPPKRPEATTVPVPEADQAVVPEKKVPRVPPKKVEAPPITVPEEPKEVI 12167
Query: 142 SFAE 145
+
Sbjct: 12168 PEKK 12171
Score = 37.6 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 11/150 (7%), Positives = 32/150 (21%)
Query: 29 LLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQ 88
+ + +SV + +K + + K + + +
Sbjct: 11762 APKEVVPEKKVSVVPPKKPEAPPAKVPEAPKEAAPEKKVPVAPKKKPEAPPVKVPEAPKK 11821
Query: 89 TKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKS 148
+ E +P + K + ++ + E
Sbjct: 11822 VVPEKKLPVAAPKKPEAPAAEVPEVPKTAVPQKKIPEAIPPKPESPPLEVPEVPPKEVTP 11881
Query: 149 IDTVVVRPDKKELLSKVEKSSRKRIPSQDA 178
V P K + + + +
Sbjct: 11882 EKKVPAAPPTKPEIPPPKVPEAPQAAVVEE 11911
>gi|91977071|ref|YP_569730.1| hypothetical protein RPD_2600 [Rhodopseudomonas palustris BisB5]
gi|91683527|gb|ABE39829.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB5]
Length = 147
Score = 46.4 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 8/88 (9%), Positives = 24/88 (27%), Gaps = 2/88 (2%)
Query: 165 VEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDV 224
+ + + D + + + W P +++ + + G +LGK +
Sbjct: 21 SSRVALAQATPIDNLNELFAALKQCWRPPQLTPGDPGMQITVLVSFKRDGEILGKPRITF 80
Query: 225 VGGTELVRRMLR--ENARKAVIKSQAFR 250
L + + +
Sbjct: 81 ESANTPGADSLVYRIAVMETLQRCTPLP 108
>gi|153011476|ref|YP_001372690.1| hypothetical protein Oant_4161 [Ochrobactrum anthropi ATCC 49188]
gi|151563364|gb|ABS16861.1| protein of unknown function DUF930 [Ochrobactrum anthropi ATCC
49188]
Length = 294
Score = 46.4 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 19/155 (12%), Positives = 48/155 (30%), Gaps = 2/155 (1%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
GL S++LH++ L + + ++V+ + ++ + Q
Sbjct: 15 GLPASVVLHLVLATLFLVRLPALPSP--ASEQSVNVELVQPPPPEKKPQQQTPKTPEQAA 72
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
Q S +++ +Q E ++ A ++ S +
Sbjct: 73 PPPQPQAFESASAKQDVKSPPEQDLPPVAPEEIQKPDEPSETAATTDADKAEEKPSVTEG 132
Query: 126 QKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKE 160
Q + E+ + A +K+ + D +
Sbjct: 133 QPSEQLLQAEKPSESGQAAAEKTQTAPKQKADAPK 167
>gi|313892876|ref|ZP_07826453.1| TonB family C-terminal domain protein [Veillonella sp. oral taxon
158 str. F0412]
gi|313442229|gb|EFR60644.1| TonB family C-terminal domain protein [Veillonella sp. oral taxon
158 str. F0412]
Length = 264
Score = 46.4 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 30/250 (12%), Positives = 63/250 (25%), Gaps = 18/250 (7%)
Query: 4 ENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQ 63
+ IS I+H + L ++ I E +D + +
Sbjct: 8 KKAAIISAIVH--LIALFVAVIFFVVVPAIQDMETYEIDLTQSVLDDGGSGHAGGGGGNR 65
Query: 64 FKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPY 123
+ + + + + T + GE S
Sbjct: 66 SDLFPKPLSADEVAARTKAVVANIDPSTVTDIPDAVDVPPKGGEHKGNTSG--------- 116
Query: 124 DKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVR 183
D + G + + + S + + R
Sbjct: 117 DNSAGGSGPSTGGGSGGGNGTGVGTGNGDGQGQGNGNGNGNGNGDSHGTVKAAFDTEGFR 176
Query: 184 NRVIANWNIPSDF-KRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKA 242
RV N +PS KR + V + L+ G ++G+ + + A A
Sbjct: 177 VRVQNNAQMPSMALKRKLQGDVTVQVTLDTNGNLIGQSI------RSSTNEIFNDAAMSA 230
Query: 243 VIKSQAFRLS 252
V+ + ++
Sbjct: 231 VVAATPYQNP 240
>gi|189218932|ref|YP_001939573.1| hypothetical protein Minf_0920 [Methylacidiphilum infernorum V4]
gi|189185790|gb|ACD82975.1| Hypothetical protein Minf_0920 [Methylacidiphilum infernorum V4]
Length = 425
Score = 46.4 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 26/227 (11%), Positives = 57/227 (25%), Gaps = 12/227 (5%)
Query: 47 EDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKG 106
+ K E P + +E + D D ++ S
Sbjct: 201 SKTTRDENSKEENPAKALEKLLKEINNPTEEYLKKEDPNGDPLMPFQNKSPKAPSQKEGK 260
Query: 107 EQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVE 166
E S+ + + ++ + + + +
Sbjct: 261 EATNNSSSQSPTQNNAATASDRLEPVSQPSPPPAPPPSPESFERHRMQIAGGRTAELGPV 320
Query: 167 KSSRKRIPSQDAIAIVRNRVIANW--NIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDV 224
S + A + + + W + V++ F + G V ++
Sbjct: 321 SPSARETELGRYKARLYRAIGSRWYLEVEQSMGLLAIGSVRIRFYVQSDGTVSSIQVINE 380
Query: 225 VGGTELVRRMLRENARKAVIKSQAFRLSPSTYK------SWRNITLF 265
G TE++R + ++ + S F K W IT
Sbjct: 381 EGITEVLRSISLDS----IRLSAPFGPFSEEMKGQIGNGFWEEITFT 423
Score = 37.2 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 20/198 (10%), Positives = 60/198 (30%), Gaps = 15/198 (7%)
Query: 2 RLENGLAISMILHVMFLLLLYFN-----FNVQLLVPISRREMLSVDNIYNEDYHSSKYKK 56
L L IS ++H+ F L L F + ++ + E + ++ +
Sbjct: 27 NLRGFLFISFVIHLAFTLFLGSGVLHRFFPAATPHDPPPPTLTMLEMVQPESFIPTEEWQ 86
Query: 57 I---EEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTH-------ATENETKRSSSSKG 106
+P + L + Q+ + + G
Sbjct: 87 KTDHPDPNALLQSDRSTTLRSQETPQKENSPLPQLSGDPRSSMSYIDVPSSRPSPPRPSG 146
Query: 107 EQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVE 166
+ + + +++ + + +Q S E+ + K+ + +
Sbjct: 147 KSTPAQRQSALRKMENENQKPPTPTLTPKTAVQKQSKTEETKENPQPKETVKEPSKTTRD 206
Query: 167 KSSRKRIPSQDAIAIVRN 184
++S++ P++ +++
Sbjct: 207 ENSKEENPAKALEKLLKE 224
>gi|144575442|gb|AAZ53807.2| conserved hypothetical protein [Mycoplasma hyopneumoniae 7448]
Length = 736
Score = 46.4 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 19/176 (10%), Positives = 49/176 (27%), Gaps = 2/176 (1%)
Query: 33 ISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTH 92
++ + + N N D S K + S E + + T
Sbjct: 45 LTISPSIILKNNPNTDNFSPVANTDYIQPPPKKEVPEAPKPTPPSETEKKPVYIPEIPTV 104
Query: 93 ATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTV 152
+ + + ++ K + +K Q + + +
Sbjct: 105 KKTDLKPEINLEEKSKSKKNETAAIIIAPTILPNPPKSDLSKNQPAPAGAQTVLPKEEPI 164
Query: 153 VVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHF 208
+ RP + + K ++ R S + ++ + + +K R++ H
Sbjct: 165 ITRPRQNAPIPKKDEYQRVD-LSGKYGSAIQTLIQRT-RYNISARTTEKNRIEQHI 218
>gi|295135756|ref|YP_003586432.1| hypothetical protein ZPR_3932 [Zunongwangia profunda SM-A87]
gi|294983771|gb|ADF54236.1| conserved hypothetical protein [Zunongwangia profunda SM-A87]
Length = 277
Score = 46.4 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 32/246 (13%), Positives = 66/246 (26%), Gaps = 7/246 (2%)
Query: 4 ENGLAISMILHVMFL-LLLYFNFNVQLLVPIS-RREMLSVDNIYNEDYHSSKYKKIEEPV 61
+ I+++LHV+ L +L +F F P + + + + +K +
Sbjct: 10 KKSFTITVVLHVLLLAILFFFGFTYLDPPPENGIAVNFGTSEVGSGNQQPTKPIESAPKN 69
Query: 62 VQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVS 121
+ + E + E + + + K+ + P
Sbjct: 70 TSPEVTPPEPEPVVEEKVVTQEIEEAPVVEEKKEVKKPVETEKPKKVEPKKEEPAKKPDP 129
Query: 122 PYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAI 181
DK ++ + + KS D
Sbjct: 130 KPDKSTTDAMSSILNGPERSGEESGGEGNDNAAGDKGSPDGDPNAKSYYGNGAGLDGDGN 189
Query: 182 VRNRVIANWNIPSDFKR-FKKLRVKMHFQLNQKGFVLGK-INVDVVGGTELVRRMLRENA 239
R N + + V + ++N++G V+ V L E A
Sbjct: 190 YRLGGRRALNKEKFVQDCNESGIVVVRIEVNRQGQVIAATPGVKGTTNNASC---LTEPA 246
Query: 240 RKAVIK 245
RKA +
Sbjct: 247 RKAALA 252
>gi|319943003|ref|ZP_08017286.1| TolA-TolQ-TolR complex; inner membrane protein TolA [Lautropia
mirabilis ATCC 51599]
gi|319743545|gb|EFV95949.1| TolA-TolQ-TolR complex; inner membrane protein TolA [Lautropia
mirabilis ATCC 51599]
Length = 379
Score = 46.4 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 21/207 (10%), Positives = 57/207 (27%), Gaps = 7/207 (3%)
Query: 49 YHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQ 108
+K +E + E + ++ ++ ++ K + K + ++
Sbjct: 166 QREEAQRKEQERKAEEARKEAERKAAEEKKRQEEEKKREEQKKQEEARQRKLAQEKAEKE 225
Query: 109 ALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKS 168
++ + +K KA ++ Q + ++ + + S
Sbjct: 226 KAEKEKAEKEKAEKAEKAAAQKAAAEKAAAQRQAAEARRKAAVSALLSQAGDADSTAIHG 285
Query: 169 SRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGT 228
S A V + + N + +L++ G + G
Sbjct: 286 STSGARDAGYAARVSSAIRNNTTFFQQISG--NPKAVFDVRLDRDGRIQDVRLKQSSGNA 343
Query: 229 ELVRRMLRENARKAVIKSQAFRLSPST 255
A +A+ ++ F S
Sbjct: 344 -----AWDSAAERAIRRTDPFPCPRSG 365
>gi|149920381|ref|ZP_01908851.1| TonB-like protein [Plesiocystis pacifica SIR-1]
gi|149818823|gb|EDM78265.1| TonB-like protein [Plesiocystis pacifica SIR-1]
Length = 404
Score = 46.4 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 16/100 (16%), Positives = 27/100 (27%), Gaps = 14/100 (14%)
Query: 176 QDAIAIVRNRVIANWNIPSDFKRFKKLRVK---------MHFQLNQKGFVLGKINVDVVG 226
+R V W R K + L+ +G ++ D G
Sbjct: 282 ASFFNRLRAAVSEQWRPEKVHDEVDPKRTKFGDATRTTIVRVVLDARGGLVSAKVEDSCG 341
Query: 227 GTELVRRMLRENARKAVIKSQAFRLSPSTYKSWRNITLFF 266
L A +A+ + F P ++I F
Sbjct: 342 AAH-----LDAEAVRALEAAAPFPNPPRGLAVGKHIVFHF 376
>gi|144227629|gb|AAZ44523.2| conserved hypothetical protein [Mycoplasma hyopneumoniae J]
Length = 736
Score = 46.4 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 19/177 (10%), Positives = 50/177 (28%), Gaps = 2/177 (1%)
Query: 33 ISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTH 92
++ + + N N D S K + S E + + T
Sbjct: 45 LTISPSIILKNNPNTDNFSPVANTDYIQPPPKKEVPEAPKPTPPSETEKKPVYIPEIPTV 104
Query: 93 ATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTV 152
+ + + ++ K + +K Q + + +
Sbjct: 105 KKTDLKPEINLEEKSKSKKNETAAIIIAPTILPNPPKSDLSKNQPAPAGAQTVLPKEEPI 164
Query: 153 VVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQ 209
+ RP + + K ++ R S + ++ + + +K R++ H +
Sbjct: 165 ITRPRQNAPIPKKDEYQRVD-LSGKYGSAIQTLIQRT-RYNISARTTEKNRIEQHIE 219
>gi|115524774|ref|YP_781685.1| hypothetical protein RPE_2768 [Rhodopseudomonas palustris BisA53]
gi|115518721|gb|ABJ06705.1| conserved hypothetical protein [Rhodopseudomonas palustris BisA53]
Length = 146
Score = 46.4 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 10/88 (11%), Positives = 29/88 (32%), Gaps = 2/88 (2%)
Query: 165 VEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINV-- 222
+ + D + + + W P+ + +++ + + G +LGK V
Sbjct: 20 TAAPAIGQEARIDTLKELFATLGRCWRAPALAQGSAGMQITVLVSFRRDGSILGKPKVTF 79
Query: 223 DVVGGTELVRRMLRENARKAVIKSQAFR 250
+ ++ R R + + +
Sbjct: 80 ESADASDSDRLAYRVAVMETLQRCTPLP 107
>gi|296163682|ref|ZP_06846403.1| TonB family protein [Burkholderia sp. Ch1-1]
gi|295886078|gb|EFG65975.1| TonB family protein [Burkholderia sp. Ch1-1]
Length = 255
Score = 46.4 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 18/161 (11%), Positives = 44/161 (27%), Gaps = 20/161 (12%)
Query: 93 ATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTV 152
+ + R+ + + + SP + ++ + E K
Sbjct: 96 PQQVKKDRAEPTTESPVIPHPQIQLAGNSPPPVPAAKPLVDPGPPVKDTTAPESKPEPPA 155
Query: 153 VVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQ 212
+ + + + ++ A +R + + + F +N+
Sbjct: 156 PQPSNARPTWEGLVLGALNKVKRYPRDAALRRQ---------------QGVPYIRFVMNR 200
Query: 213 KGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSP 253
+G VL G R L + A ++Q P
Sbjct: 201 EGNVLSSRIERSSG-----FRPLDDEAISLPKRAQPLPKPP 236
>gi|326566622|gb|EGE16764.1| hypothetical protein E9Q_07799 [Moraxella catarrhalis BC1]
Length = 266
Score = 46.4 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 31/243 (12%), Positives = 63/243 (25%), Gaps = 29/243 (11%)
Query: 7 LAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKG 66
+ S++LH + ++ + P + + V +
Sbjct: 21 ILASVLLHTVIIIAVAAPLITPPTKPNTTIQTALV-------------------GQEAFN 61
Query: 67 SSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQ 126
++ L + Q + + A +N+ + + + + Y
Sbjct: 62 RAKTALSNHHANQNKPTATNTSSTITANDNDNAFMQAQNQHRYHPQVSTSATTTQAYHPP 121
Query: 127 KISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRV 186
S + S +S+ R AI V++R+
Sbjct: 122 PNSAPFESNSPNIQNQPTNAHAKLAEYSNHVSDLEQSNHTESTPSRAQINAAITSVKHRI 181
Query: 187 IANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKS 246
A W + +NQ+G V GG R E+ AV +
Sbjct: 182 EAIWQRYPKQP---NQTITFQVNMNQQGDVTSIQF----GGGHPDLR---ESVEAAVYAA 231
Query: 247 QAF 249
F
Sbjct: 232 APF 234
>gi|52424777|ref|YP_087914.1| cell envelope integrity inner membrane protein TolA [Mannheimia
succiniciproducens MBEL55E]
gi|52306829|gb|AAU37329.1| TolA protein [Mannheimia succiniciproducens MBEL55E]
Length = 392
Score = 46.4 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 15/123 (12%), Positives = 36/123 (29%), Gaps = 12/123 (9%)
Query: 147 KSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKM 206
++ + + A+++ + + F +
Sbjct: 278 SAMKGGNANKAGSQGSGAGLGAGDGGKVGDQYGAVIKREIKRRFLKDPSFAGK---VCSI 334
Query: 207 HFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSP--STYKSWRNITL 264
QL + G + G V G + + A AV +++ +P Y ++N +
Sbjct: 335 RIQLARDGTITGYQKV--SGPDD-----ICTAALSAVARTKKVPAAPSDDVYNKYKNPII 387
Query: 265 FFV 267
F
Sbjct: 388 DFD 390
>gi|307702441|ref|ZP_07639397.1| beta-N-acetylhexosaminidase [Streptococcus oralis ATCC 35037]
gi|307624023|gb|EFO03004.1| beta-N-acetylhexosaminidase [Streptococcus oralis ATCC 35037]
Length = 1574
Score = 46.4 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 17/177 (9%), Positives = 34/177 (19%), Gaps = 10/177 (5%)
Query: 29 LLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQ 88
PIS D + ++ E Q + V E
Sbjct: 79 AEQPISENTPAITDLVNEKEEAKPAPADKAEKPAQPTEKEEVKPEEAPQVAEKKADKPTL 138
Query: 89 TKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKS 148
E ++ R K + N+ +
Sbjct: 139 ADVPKNEEKSLRPKEIKFDTWEDLLKWEPGAREDDP-------INRSSVELAKRHRGQLV 191
Query: 149 IDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVK 205
+ R + L + K+ + + W ++ L
Sbjct: 192 NEKASRRAKVQALANTNSKAKDHASVGGEE---FKAYAFDYWQYLDSMVFWEGLVPT 245
>gi|305432652|ref|ZP_07401813.1| TonB domain protein [Campylobacter coli JV20]
gi|304444363|gb|EFM37015.1| TonB domain protein [Campylobacter coli JV20]
Length = 258
Score = 46.4 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 22/228 (9%), Positives = 70/228 (30%), Gaps = 26/228 (11%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
+++ ++V ++L++F + + + +I + +
Sbjct: 11 SFLLAVAVYVFIIILIFF------RLVTHIQPAIQYTDIQDS------------FIDIEL 52
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLR-----MPV 120
+ +V + S ++ + + + +T + + K S +
Sbjct: 53 MEPSKKVVNEQSAPKDIQKPAQELDIEKLFAQTTNKAVKTEDVDQKASNFNELFGSIKEI 112
Query: 121 SPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIA 180
KI + E + A + +++ + ++K + +
Sbjct: 113 QEEKTTKIQSSAKSETTSSSKTQASELVKQLNDSLLEEESINQGESIKNQKTGIYDEFLG 172
Query: 181 IVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGT 228
V + W + + VK+ +++ G G +V+ G +
Sbjct: 173 KVVRTITQRWR--QYHPNSENISVKVKIFIDENGNF-GYTSVEKSGNS 217
>gi|293364204|ref|ZP_06610930.1| endo-beta-N-acetylglucosaminidase D [Streptococcus oralis ATCC
35037]
gi|291317050|gb|EFE57477.1| endo-beta-N-acetylglucosaminidase D [Streptococcus oralis ATCC
35037]
Length = 1550
Score = 46.0 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 17/177 (9%), Positives = 34/177 (19%), Gaps = 10/177 (5%)
Query: 29 LLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQ 88
PIS D + ++ E Q + V E
Sbjct: 55 AEQPISENTPAITDLVNEKEEAKPAPADKAEKPAQPTEKEEVKPEEAPQVAEKKADKPTL 114
Query: 89 TKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKS 148
E ++ R K + N+ +
Sbjct: 115 ADVPKNEEKSLRPKEIKFDTWEDLLKWEPGAREDDP-------INRSSVELAKRHRGQLV 167
Query: 149 IDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVK 205
+ R + L + K+ + + W ++ L
Sbjct: 168 NEKASRRAKVQALANTNSKAKDHASVGGEE---FKAYAFDYWQYLDSMVFWEGLVPT 221
>gi|261414611|ref|YP_003248294.1| hypothetical protein Fisuc_0199 [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|261371067|gb|ACX73812.1| hypothetical protein Fisuc_0199 [Fibrobacter succinogenes subsp.
succinogenes S85]
Length = 310
Score = 46.0 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 27/295 (9%), Positives = 77/295 (26%), Gaps = 39/295 (13%)
Query: 7 LAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKG 66
+ +++ H+ + L N+ L P + + + ++ + K P + +
Sbjct: 23 IVCAVVFHLAVVGTLIALNNIDLSKPAEEIPVF--EMVQVDEPVKAPAAKTALPEPEPQQ 80
Query: 67 -------------------------------SSQENLVRDFSVQENGDRFSDQTKTHATE 95
+ E + + D +
Sbjct: 81 APKVEPPPPQPPEPVPETTPEPEPAPEPTPVKTLEPEAPQVPEEPAPEVKPDTPEPVPVP 140
Query: 96 NETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVR 155
+ + + + K + K + + +
Sbjct: 141 EPKAEEKKPEEKVEKPKPVEKPVEKPVEKVAKKTVEKKKVEKKPAKKPKDDDFDIDDLNL 200
Query: 156 PDKKELLSKVEKSS-RKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKG 214
E+ S + Q + + ++++N+N P+ + + + F + + G
Sbjct: 201 QKSFEMPSLKAVNPIDMDPLMQVFLERAKAKIMSNFNPPNGLTIDRDAKTMVQFTVERSG 260
Query: 215 FVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPSTYKSWRNITLFFVPS 269
+ + + +AV S+ L P+ S + F P+
Sbjct: 261 AITSVFLKRSSSNS-----AWDHLSMRAVKISKLPELPPTYKGSSLVLQFNFTPN 310
>gi|54020510|ref|YP_115953.1| hypothetical protein mhp443 [Mycoplasma hyopneumoniae 232]
gi|53987683|gb|AAV27884.1| conserved hypothetical protein [Mycoplasma hyopneumoniae 232]
Length = 736
Score = 46.0 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 19/176 (10%), Positives = 49/176 (27%), Gaps = 2/176 (1%)
Query: 33 ISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTH 92
++ + + N N D S K + S E + + T
Sbjct: 45 LTISPSIILKNNPNTDNFSPVANTDYIQPPPKKEVPEAPKPTPPSETEKKPVYIPEIPTV 104
Query: 93 ATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTV 152
+ + + +A K + +K Q + + +
Sbjct: 105 KKTDIKPEINLEEKSKAKKNETAAIIIAPTILPNPPKSDLSKNQPAPAGAQTVLPKEEPI 164
Query: 153 VVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHF 208
+ RP + + K ++ R S + ++ + + +K +++ H
Sbjct: 165 ITRPRQNAPVPKKDEYQRVD-LSGKYGSAIQTLIQRT-RYNISARTTEKNQIQQHI 218
>gi|126730592|ref|ZP_01746402.1| TonB-like protein [Sagittula stellata E-37]
gi|126708758|gb|EBA07814.1| TonB-like protein [Sagittula stellata E-37]
Length = 284
Score = 46.0 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 30/255 (11%), Positives = 65/255 (25%), Gaps = 12/255 (4%)
Query: 5 NGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQF 64
G+A+S+ +HV L P RRE V D +
Sbjct: 17 AGVAVSLAVHVALPASLLA--RAPEPEPEVRREDTGVQGAIMFDLSDIIAAPSDAGEDSV 74
Query: 65 KGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYD 124
E + + + +
Sbjct: 75 AVEEAVEAPTVTESPEAVHAARAADEPILNQTPYEVQDEDLKFGIAAPKPEQDTEEIAEE 134
Query: 125 KQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRN 184
+ + +Q Q + + S +V + + + +S + +
Sbjct: 135 VAQEFEEEQIDQASQTGAVEAEASESSVSGVDAEAQAETAQAESEGLTAEQLAEVTEWQK 194
Query: 185 ----RVIANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENA 239
R+ + P ++ + V++ F +++ G V + G +L E A
Sbjct: 195 AVVLRIAKAKSYPQAARKKGLEGEVRVKFTIDRYGAVTAREVDVSSGSV-----LLDEAA 249
Query: 240 RKAVIKSQAFRLSPS 254
+ K P+
Sbjct: 250 LEVFDKLDRLPTPPN 264
>gi|289525640|emb|CBJ15121.1| histone H1-I [Chlamydia trachomatis Sweden2]
Length = 235
Score = 46.0 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 19/147 (12%), Positives = 45/147 (30%)
Query: 7 LAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKG 66
L S+I+H +L+F+ + +S + V ++ +P+ +
Sbjct: 10 LCASIIIHTALGGMLFFSAPQKKKPRLSPFKERIVALPPEPKITTTLQTPSPQPIRKPVK 69
Query: 67 SSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQ 126
++ + + K + + + K + LK+ A L ++ +
Sbjct: 70 NAPAPEKKAAKPPAISNPQKSPQKPNKASPTPRNETPEKKQATLKKLAQLANQLAEEGET 129
Query: 127 KISKATNKEQDLQGISFAEKKSIDTVV 153
+ S Q E S
Sbjct: 130 QESHIAQFSWPAQAQVLTENTSYQQDA 156
>gi|237739015|ref|ZP_04569496.1| predicted protein [Fusobacterium sp. 2_1_31]
gi|229423615|gb|EEO38662.1| predicted protein [Fusobacterium sp. 2_1_31]
Length = 266
Score = 46.0 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 28/267 (10%), Positives = 79/267 (29%), Gaps = 11/267 (4%)
Query: 3 LENGLAISMILHVMFLLLLY-FNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPV 61
++ + IS+I+H+ L L + + + E++ + + + + K ++
Sbjct: 1 MKKYVLISLIVHLAILFLFATIKTDEVEKEKLVKNEVVPIAFVTKQTSDNPGAKTLDTQE 60
Query: 62 VQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVS 121
+ + + + ++ + + K ++ S
Sbjct: 61 REKTKEEKPKSEPKIEKKVEEKKVEEKKPVEKPIEKKAEKTEEKKIESNIPSKNEPSHSD 120
Query: 122 PYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAI 181
K ++ D ++ S + D + + S+
Sbjct: 121 TSSKSSSESSSTSSSDKSSNHSSDGGSPNGNSSGKDLGPNFIVDGDGTNIALTSEGINYQ 180
Query: 182 VRNRVIANW-NIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENAR 240
+ N V ++ + +++V + F + KG V +
Sbjct: 181 IINEVEPDYPSQAESIGYSNQVKVTVKFLVGLKGNVEKAEIIKSHKDLG-----FDAEVM 235
Query: 241 KAVIKSQAFRLSPSTYKSWRNITLFFV 267
KA+ K + + +NI ++F
Sbjct: 236 KAIKKWR----FKPIFHKGKNIKVYFT 258
>gi|317486271|ref|ZP_07945103.1| TonB family domain-containing protein [Bilophila wadsworthia 3_1_6]
gi|316922441|gb|EFV43695.1| TonB family domain-containing protein [Bilophila wadsworthia 3_1_6]
Length = 227
Score = 46.0 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 18/101 (17%), Positives = 32/101 (31%), Gaps = 13/101 (12%)
Query: 170 RKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTE 229
+ V +V+ W P+ V + ++ G L G
Sbjct: 33 AGADTAGGYAGDVLVKVLPAWQPPAGASG----IVTISLRIGSDGRPLYCEASRKSGNA- 87
Query: 230 LVRRMLRENARKAVIKSQAFRLSPSTYKSWRNITLFF--VP 268
L E+A +AV+++ P Y + + L F P
Sbjct: 88 ----ALDESACQAVVRAGTLPTPP--YGAITEVYLTFMTDP 122
>gi|76789336|ref|YP_328422.1| histone H1-I [Chlamydia trachomatis A/HAR-13]
gi|76167866|gb|AAX50874.1| histone H1-I [Chlamydia trachomatis A/HAR-13]
Length = 235
Score = 46.0 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 19/147 (12%), Positives = 46/147 (31%)
Query: 7 LAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKG 66
L S+I+H+ +L+F+ + +S + V ++ +P+ +
Sbjct: 10 LCTSIIIHIALGGMLFFSAPQKKKPRLSPFKERIVALPPEPKITTTLQTPSPQPIRKPVK 69
Query: 67 SSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQ 126
++ + + K + + + K + LK+ A L ++ +
Sbjct: 70 NAPAPEKKAAKPPVISNPQKSPQKPNKASPTPRNETPEKKQATLKKLAQLANQLAEEAET 129
Query: 127 KISKATNKEQDLQGISFAEKKSIDTVV 153
+ S Q E S
Sbjct: 130 QESYIAQFSWPAQAQVLTENTSYQQDA 156
>gi|260565825|ref|ZP_05836308.1| TonB-dependent receptor protein [Brucella melitensis bv. 1 str.
16M]
gi|260151198|gb|EEW86293.1| TonB-dependent receptor protein [Brucella melitensis bv. 1 str.
16M]
Length = 271
Score = 46.0 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 20/210 (9%), Positives = 55/210 (26%), Gaps = 13/210 (6%)
Query: 34 SRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHA 93
+ + V+ + + + + E +E + + Q
Sbjct: 48 TEVAAMVVELVPDLVAPAEERVSEEVQPETTTEQPEEVQPEPEPEPQPEAKAEPQQVQEP 107
Query: 94 TENETK--RSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDT 151
E + + + ++ + ++ + E +
Sbjct: 108 EEVIPDVVEAQKPEP----------KKVEKLKPQKPKPEKVKPKKAEKAAETREASAPRV 157
Query: 152 VVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLN 211
K + E S+ + + +++ + N R + + F ++
Sbjct: 158 DADNGAKVAASKRGETSASAGVIWAKWTSRLQSHMARNARFLQGKSRNTRGEAHVAFVID 217
Query: 212 QKGFVLGKINVDVVGGTELVRRMLRENARK 241
G VL G + + L E AR+
Sbjct: 218 PSGNVLSARIAVSSGDPAVDQLAL-EAARR 246
>gi|157737251|ref|YP_001489934.1| hypothetical protein Abu_1005 [Arcobacter butzleri RM4018]
gi|157699105|gb|ABV67265.1| conserved hypothetical membrane protein [Arcobacter butzleri
RM4018]
Length = 259
Score = 46.0 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 23/223 (10%), Positives = 67/223 (30%), Gaps = 11/223 (4%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
IS+ILH++ L+ + N + V+ K+ KI++ ++ +
Sbjct: 13 AFIISVILHLLLLISYNKSLNETKQENKQEQNEKIVE-----KKSDVKFVKIQQEIISQE 67
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
+ S + + + S+ +QA + + + +
Sbjct: 68 KKIEPKPEPKVSEKIIEKQIKVPKNESENKISQNTKKSADIKQAKEMQKNILKETNALQE 127
Query: 126 QKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNR 185
+ + ++++ + E + + + K + +EK+ +
Sbjct: 128 KTLENFLSQKEPINKNILNELEKLYGEEYKNFTKVQKAYLEKNLNNFQVIT------QRV 181
Query: 186 VIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGT 228
+ K+ + F G + ++ G +
Sbjct: 182 LDRMGYPELAAKQKIGGINTVEFIFYPNGDISDLRIINSSGYS 224
>gi|253690552|ref|YP_003019742.1| TonB family protein [Pectobacterium carotovorum subsp. carotovorum
PC1]
gi|251757130|gb|ACT15206.1| TonB family protein [Pectobacterium carotovorum subsp. carotovorum
PC1]
Length = 273
Score = 46.0 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 21/213 (9%), Positives = 57/213 (26%), Gaps = 6/213 (2%)
Query: 43 NIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSS 102
+ + + VQ S Q+ V Q + + + +
Sbjct: 42 LDSSIEAPPPAMMLMVADSVQSTPSPQDAPVGPQQTLSTPQEAMTQPEKMTQDAPSLAPA 101
Query: 103 SSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELL 162
A ++ +K + T ++ + + ++
Sbjct: 102 PKPVITAAQKEKPQPQKKVQKKMEKPVQETTPQEPIAPSEKPPAPVTSAPLPGSSQQVAA 161
Query: 163 SKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKIN 221
+++ R D + + + P+ R + + ++ L++ G VL
Sbjct: 162 PYNSDAAQMRKGVADWSSQLLAHLSRYKRYPAQAVRQQLQGIAQIRVTLDRTGKVLAVSL 221
Query: 222 VDVVGGTELVRRMLRENARKAVIKSQAFRLSPS 254
G L + + ++Q P+
Sbjct: 222 ASSSG-----VMPLDKESVALPQRAQPLPAPPA 249
>gi|269302572|gb|ACZ32672.1| tolA protein-like protein [Chlamydophila pneumoniae LPCoLN]
Length = 262
Score = 46.0 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 29/258 (11%), Positives = 62/258 (24%), Gaps = 12/258 (4%)
Query: 7 LAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKG 66
+AI+ +H LLL+ F L + + + + + +
Sbjct: 8 IAITACIHGGILLLV---FASPLPKKRLQPKAFQEKLVTIQPKPPVPTPSVVVDPAKTIR 64
Query: 67 SSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQ 126
S + + + + K + A
Sbjct: 65 PSVATQPQQQA--KCSPPQENVQKALKKPIPKVVKTEPPKPSPAPTVAKKTTATEKPPPS 122
Query: 127 KISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRV 186
K T + +++ V + +K E K + +
Sbjct: 123 TTKKNTQLSKTQLQTLSEVAQALFLHVDKIEKSETSLKNISWPSTAQLTMHSELKATQED 182
Query: 187 IANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKS 246
+ K V++ L+ G + + V + R A
Sbjct: 183 ELCELFRTHIALPSKGYVRIKLVLSPNGEIQECSFLSEVSAADKQLLTQRIQAL------ 236
Query: 247 QAFRLSPSTYKSWRNITL 264
F+ YK +NI+
Sbjct: 237 -PFQKFLEKYKVSKNISF 253
>gi|253996585|ref|YP_003048649.1| hypothetical protein Mmol_1216 [Methylotenera mobilis JLW8]
gi|253983264|gb|ACT48122.1| conserved hypothetical protein [Methylotenera mobilis JLW8]
Length = 314
Score = 46.0 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 12/189 (6%), Positives = 50/189 (26%), Gaps = 3/189 (1%)
Query: 1 MRLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP 60
+ + +++I+ ++ L ++F V + +I K +P
Sbjct: 40 VNVSRNTLLAIIISILVHLGIFF---FAPKVEFDQPPASPASSIEVSLAPPQKPAVAPQP 96
Query: 61 VVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPV 120
++ + + ++ T+ ++ ++
Sbjct: 97 KIEPPKNETIAKPVKKTPPIKPEKHKPIINVPTTKADSSLKVPDTPTLPPPPVQENKLDP 156
Query: 121 SPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIA 180
S + + A +++ + + + E+ + I
Sbjct: 157 SKFPDMASYMKAVQASRQGTEYDAARQNAEAIAKERGPSAEQMRDERIKNNFKSGTNGIF 216
Query: 181 IVRNRVIAN 189
+ ++ +
Sbjct: 217 EITSKSSRH 225
>gi|269862173|ref|XP_002650733.1| hypothetical protein EBI_23446 [Enterocytozoon bieneusi H348]
gi|220065698|gb|EED43322.1| hypothetical protein EBI_23446 [Enterocytozoon bieneusi H348]
Length = 261
Score = 46.0 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 19/191 (9%), Positives = 57/191 (29%), Gaps = 8/191 (4%)
Query: 62 VQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVS 121
+ + + E + Q ++ + + K ++ + +
Sbjct: 64 ITAEKHAAEKQAEKLAAQRAAEKAAAEKAAAQKAAAQKAAAEKAAAEKQAAQKAAAAQRA 123
Query: 122 PYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAI 181
K+++++ K + +++ +R + ++ ++++ + I
Sbjct: 124 AELKRQLARQQAKAAEAARAKALQQQMEAGAKLRAEANMAAARAQQAAENQRMLGMLINT 183
Query: 182 VRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARK 241
++ RV W+ L + L +G +LG V G +
Sbjct: 184 IKTRVSEKWSTNFSPA----LSCVLQIHLGPQGQLLGAPVVVRSSGNPGF----DRSVIA 235
Query: 242 AVIKSQAFRLS 252
V + F
Sbjct: 236 TVEAAAPFEPP 246
>gi|37520276|ref|NP_923653.1| hypothetical protein glr0707 [Gloeobacter violaceus PCC 7421]
gi|35211269|dbj|BAC88648.1| glr0707 [Gloeobacter violaceus PCC 7421]
Length = 282
Score = 46.0 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 16/103 (15%), Positives = 36/103 (34%), Gaps = 6/103 (5%)
Query: 164 KVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVD 223
E + + VR+RV+ W P R+++ ++++ G V +
Sbjct: 40 AQEPKAASNPELKAYQVKVRDRVLEYWQPP---DIDSDTRLQVLVRVDRDGKVSKREV-- 94
Query: 224 VVGGTELVRRMLRENARKAVIKSQAFR-LSPSTYKSWRNITLF 265
G + E A+ ++Q F + P+ + +
Sbjct: 95 KTLGDAPPSKAAEEAVLDAIGRAQPFPTVPPNVAPFYVEVRFN 137
>gi|221640394|ref|YP_002526656.1| TonB family protein [Rhodobacter sphaeroides KD131]
gi|221161175|gb|ACM02155.1| TonB family protein precursor [Rhodobacter sphaeroides KD131]
Length = 294
Score = 46.0 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 16/116 (13%), Positives = 37/116 (31%), Gaps = 9/116 (7%)
Query: 139 QGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKR 198
+ + A + V + + + A +R R+ + R
Sbjct: 171 REVKKAAAPPPQQAAAPTRSTGSAAAVASRGQVQNLTAKWGAEIRKRIQR----HTRGAR 226
Query: 199 FKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPS 254
+ V + ++Q G + G + G + + A +AV + F +P+
Sbjct: 227 GQAGEVTVRLTVSQGGALGGASVIRSSGNPR-----IDQLALRAVQSAGRFPAAPA 277
>gi|39935198|ref|NP_947474.1| energy transducer TonB C-terminal region [Rhodopseudomonas
palustris CGA009]
gi|39649049|emb|CAE27570.1| possible energy transducer TonB, C-terminal region
[Rhodopseudomonas palustris CGA009]
Length = 285
Score = 46.0 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 19/230 (8%), Positives = 49/230 (21%), Gaps = 9/230 (3%)
Query: 28 QLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSD 87
Q+ P + +D + + + + +
Sbjct: 42 QVPPPGEPLAAIMIDLAPMTASPQPSPLDLPPGPEMQEAEAPQPEPEPVQHTAAAPEIAP 101
Query: 88 QTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNK---EQDLQGISFA 144
A E + E L K + K + +
Sbjct: 102 TPIQQAAEVPLPPDAKPSPTPDKPEPVKLEQAEPVKPKPERPKPIKRERVAKQNPSDRPP 161
Query: 145 EKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFK-KLR 203
++ + ++ + + + + P++ + +
Sbjct: 162 APRTSAPQRAERRAADAMAALAGAQAAAAMLPSYRQRLAAHLQRFKRYPTEARASGVQGT 221
Query: 204 VKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSP 253
+ F + + G VL G L V ++Q P
Sbjct: 222 ATLSFTVGRGGQVLSARLARSSG-----HPALDAETLAMVSRAQPLPPFP 266
>gi|15605328|ref|NP_220114.1| histone H1-I [Chlamydia trachomatis D/UW-3/CX]
gi|237803026|ref|YP_002888220.1| histone H1-I [Chlamydia trachomatis B/Jali20/OT]
gi|237804947|ref|YP_002889101.1| histone H1-I [Chlamydia trachomatis B/TZ1A828/OT]
gi|255311419|ref|ZP_05353989.1| histone H1-I [Chlamydia trachomatis 6276]
gi|255317720|ref|ZP_05358966.1| histone H1-I [Chlamydia trachomatis 6276s]
gi|3329042|gb|AAC68200.1| hypothetical protein CT_598 [Chlamydia trachomatis D/UW-3/CX]
gi|231273247|emb|CAX10162.1| histone H1-I [Chlamydia trachomatis B/TZ1A828/OT]
gi|231274260|emb|CAX11055.1| histone H1-I [Chlamydia trachomatis B/Jali20/OT]
gi|296436133|gb|ADH18307.1| histone H1-I [Chlamydia trachomatis G/9768]
gi|296437061|gb|ADH19231.1| histone H1-I [Chlamydia trachomatis G/11222]
gi|296437993|gb|ADH20154.1| histone H1-I [Chlamydia trachomatis G/11074]
gi|297140495|gb|ADH97253.1| histone H1-I [Chlamydia trachomatis G/9301]
gi|297748728|gb|ADI51274.1| Tola [Chlamydia trachomatis D-EC]
gi|297749608|gb|ADI52286.1| Tola [Chlamydia trachomatis D-LC]
Length = 235
Score = 46.0 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 19/147 (12%), Positives = 46/147 (31%)
Query: 7 LAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKG 66
L S+I+H+ +L+F+ + +S + V ++ +P+ +
Sbjct: 10 LCTSIIIHIALGGMLFFSAPQKKKPRLSPFKERIVALPPEPKITTTLQTPSPQPIRKPVK 69
Query: 67 SSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQ 126
++ + + K + + + K + LK+ A L ++ +
Sbjct: 70 NAPAPEKKAAKPPAISNPQKSPQKPNKASPTPRNETLEKKQATLKKLAQLANQLAEEAET 129
Query: 127 KISKATNKEQDLQGISFAEKKSIDTVV 153
+ S Q E S
Sbjct: 130 QESYIAQFSWPAQAQVLTENTSYQQDA 156
>gi|297248945|ref|ZP_06932653.1| TonB-dependent receptor [Brucella abortus bv. 5 str. B3196]
gi|297174078|gb|EFH33435.1| TonB-dependent receptor [Brucella abortus bv. 5 str. B3196]
Length = 234
Score = 46.0 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 23/186 (12%), Positives = 51/186 (27%), Gaps = 2/186 (1%)
Query: 57 IEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALL 116
+ + Q + + + + E + + ++
Sbjct: 25 VAPAEERVSEEVQPETTTEQPEEVQPEPEPEPQPEAKAEPQQVQEPEEVIPDVVEAQKPE 84
Query: 117 RMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPS- 175
V QK K + + + + S V K SK ++S
Sbjct: 85 PKKVEKLKPQKPKPEKVKPKKAEKAAETREASAPRVDADNGAKVAASKRGETSASAGVIW 144
Query: 176 QDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRML 235
+ +++ + N R + + F ++ G VL G + + L
Sbjct: 145 AKWTSRLQSHMARNARFLQGKSRNTRGEAHVAFVIDPSGNVLSARIAVSSGDPAVDQLAL 204
Query: 236 RENARK 241
E AR+
Sbjct: 205 -EAARR 209
>gi|319944582|ref|ZP_08018850.1| hypothetical protein HMPREF0551_1698 [Lautropia mirabilis ATCC
51599]
gi|319742119|gb|EFV94538.1| hypothetical protein HMPREF0551_1698 [Lautropia mirabilis ATCC
51599]
Length = 289
Score = 46.0 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 22/250 (8%), Positives = 80/250 (32%), Gaps = 12/250 (4%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
L G+ +S++ H + L + + + +P + L V + ++ V
Sbjct: 17 LTVGIVVSLVAHAVMLAIRFSAADPNRFLPAESQ--LEVVLLNASTRAKPVNAEVLAQVN 74
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
G ++ S ++ D + ++ + + + P +
Sbjct: 75 MEAGGDRDQGRA-RSPLPASEQARDGETMEQQQARIRQLEAEQQRLLALNNQNEPTPQAE 133
Query: 123 YDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIV 182
+ + + +E+ + I+ + + + + + L+ ++ ++
Sbjct: 134 PQQSQDANGGEQEELQRQIARMQAQIDRQLEDYARRPKRLTYGVNATGVNY--ARYVSAW 191
Query: 183 RNRVIANWNIPSDFKRFKKL--RVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENAR 240
+R+ + K+ + + ++++ G V+ + +L +
Sbjct: 192 ADRIEKIGTERFPEEARGKMYDSLTVTVEVDKYGNVVDVLINKKSR-----YDVLNRKVK 246
Query: 241 KAVIKSQAFR 250
+ V+ +
Sbjct: 247 EIVLAGAPYD 256
>gi|332159968|ref|YP_004296545.1| hypothetical protein YE105_C0344 [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|325664198|gb|ADZ40842.1| hypothetical protein YE105_C0344 [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
Length = 265
Score = 46.0 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 21/168 (12%), Positives = 46/168 (27%), Gaps = 6/168 (3%)
Query: 88 QTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKK 147
E K + K + +R K+ + L ++
Sbjct: 83 MAAPDDAPPEKWLEELPKLTHSAKGTHAIRPEKVVQKKKIEPTKPRTDTPLPVVAEKAAP 142
Query: 148 SIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDF-KRFKKLRVKM 206
+ + K + +S + V + P + + + +
Sbjct: 143 TTSAPLPGERHKNTATFSSDASAAISGKAAWQSDVLAHLSRYKRYPREALRYRLEGISHV 202
Query: 207 HFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPS 254
F ++ KG VL G +ML A + ++Q + P+
Sbjct: 203 RFVVDHKGKVLTAELFASSGA-----KMLDREAMILISRAQPLPIPPA 245
>gi|317059178|ref|ZP_07923663.1| predicted protein [Fusobacterium sp. 3_1_5R]
gi|313684854|gb|EFS21689.1| predicted protein [Fusobacterium sp. 3_1_5R]
Length = 247
Score = 46.0 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 25/247 (10%), Positives = 71/247 (28%), Gaps = 28/247 (11%)
Query: 1 MRLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVD-NIYNEDYHSSKYKKIEE 59
M ++ L +S +H++ + Y + + + +++SV + N +
Sbjct: 1 MTMKKYLVLSFCIHMLCFIGFYHHEMHKGEEKLPLNQVISVSFVVENPPPSDNPGSPNVA 60
Query: 60 PVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMP 119
+ K + K + K + ++ +S +
Sbjct: 61 DKILEKKENS-----------------TNEKPKEQPKKEKPKKEEQVKEKTFDSKMATKD 103
Query: 120 VSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAI 179
K++ + + + + + D + + + +
Sbjct: 104 AKEVKKEESAAVASDSHEKESSDSGKGSGSDNPFYGSNFQANGDGSYTALSSEGIN---- 159
Query: 180 AIVRNRVIANW-NIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLREN 238
+ N V ++ + +++ VK+ F + KG V + +
Sbjct: 160 YQILNEVEPDYPSQAESIGYDQRVSVKVKFLVGLKGNVENIQIIKSHKKLG-----FDDE 214
Query: 239 ARKAVIK 245
KA+ K
Sbjct: 215 VMKAIKK 221
>gi|261855129|ref|YP_003262412.1| TonB family protein [Halothiobacillus neapolitanus c2]
gi|261835598|gb|ACX95365.1| TonB family protein [Halothiobacillus neapolitanus c2]
Length = 250
Score = 46.0 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 20/186 (10%), Positives = 51/186 (27%), Gaps = 12/186 (6%)
Query: 87 DQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEK 146
+ T + ++ + K K K +
Sbjct: 56 PLAAKTNDASPTPSDKINDKVTTQALASAAGEQTNTLQKPKSGKGITTTGNNGITDTPTT 115
Query: 147 KSIDTVVVRPDKKELLSKVE---KSSRKRIPSQDAIAIVRNRVIANWNIPSD---FKRFK 200
+ R ++ S S P+ D ++ + +V A N +
Sbjct: 116 NAAPDAFNRLNEAVSRSLKTGFLTSKTVNGPAGDYLSRWKRQVEAYGNDHYPEDLISQKI 175
Query: 201 KLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRL-SPSTYKSW 259
++ + ++++G V+ G + + AR+ V + + P+ +
Sbjct: 176 SGQLILAVTIDKEGHVMDIAIQHSSGNPK-----IDTAARRLVQLASPYPPFPPALAARF 230
Query: 260 RNITLF 265
I +
Sbjct: 231 DQIVIT 236
>gi|312114307|ref|YP_004011903.1| TonB family protein [Rhodomicrobium vannielii ATCC 17100]
gi|311219436|gb|ADP70804.1| TonB family protein [Rhodomicrobium vannielii ATCC 17100]
Length = 242
Score = 46.0 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 24/149 (16%), Positives = 50/149 (33%), Gaps = 9/149 (6%)
Query: 122 PYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAI 181
++ K+++ Q E+ S+ + S +R
Sbjct: 100 EVPPEEAEVTLPKKEEEQPEKPQEQPSMPAPSSVAQDEARASTRAYQARVAQLLAAYNHK 159
Query: 182 VRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARK 241
V ++ + + P K +K RV + + G +L + V G + L E A
Sbjct: 160 VHQALMRSASRP---KNREKGRVMLELTIAPTGELLSQRVVKSSGAND-----LDETAMA 211
Query: 242 AVIKSQAF-RLSPSTYKSWRNITLFFVPS 269
++ ++ F + K R + + F S
Sbjct: 212 SLKRAAPFPPMPNDIAKGPRTLLVPFDYS 240
>gi|24374290|ref|NP_718333.1| tolA protein [Shewanella oneidensis MR-1]
gi|24348828|gb|AAN55777.1|AE015714_4 tolA protein [Shewanella oneidensis MR-1]
Length = 345
Score = 46.0 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 19/229 (8%), Positives = 71/229 (31%), Gaps = 12/229 (5%)
Query: 43 NIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSS 102
++ ++ + + + + + E+ + + + + + + + +
Sbjct: 125 LKQQQEKEKAQKAEADRKLKEQERKLAEDAAQKAAEKRKVEEAAVAKAEADRKQKEAEAK 184
Query: 103 SSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELL 162
+ A ++ + K + + + + A + + ++
Sbjct: 185 AKAEADAKAKADKAKADAEAKAKAEAKAKADAKAKADAEAKALAQQEQEMADALAAEQAA 244
Query: 163 SKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINV 222
+ + + A++++ + N + + + +L GFV+
Sbjct: 245 LSQTMNKQMQTEVGKYTAMIKSTIQRNLVVDESMRGK---TCTVSVRLANDGFVI----- 296
Query: 223 DVVGGTELVRRMLRENARKAVIKSQAFRLSPST--YKSWRNITLFFVPS 269
T+ + + A++K+ +SP Y + I L P+
Sbjct: 297 --SSQTQGGDPNVCRATKAAILKAGKLPVSPDPAVYNLMKEINLIVEPT 343
>gi|311103962|ref|YP_003976815.1| protein TolA [Achromobacter xylosoxidans A8]
gi|310758651|gb|ADP14100.1| protein TolA [Achromobacter xylosoxidans A8]
Length = 369
Score = 46.0 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 36/336 (10%), Positives = 79/336 (23%), Gaps = 92/336 (27%)
Query: 4 ENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVD--------------------- 42
L +++ +HV+ L++L F N + P + L D
Sbjct: 22 RKALILAVAVHVLLLIVLIFGVNWRSESPGPVQVQLWADGNSPDSPPPTPQPEPPKPQPK 81
Query: 43 -----------------------NIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQ 79
+ +I + K +E +
Sbjct: 82 PEPKPEPEKAPEPPPPPPPPPKPEPEAQPKTEEVDPEIALQEAKKKREQEEKARQAAEAA 141
Query: 80 ENGDRFSDQTKTHATENET--KRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQD 137
+ R ++ K + + ++ + + A +++A + +K +K ++
Sbjct: 142 KEKARLEEERKQAELKEKKRLEQERQAADKAAAEKAAAEKAAADKAAAEKKAKDDAAKKA 201
Query: 138 LQGISFAEKKSIDTVVVRPDKKELLSK--------------------------------- 164
+ AEK + + +K K
Sbjct: 202 AAEKAAAEKAAEEKAEKAAAEKAAAEKKAAAEKKAKEEAAKKAAADKALKDAFRNDALGA 261
Query: 165 -------VEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFK-RFKKLRVKMHFQLNQKGFV 216
+++ A VR V P + + + QL G V
Sbjct: 262 AGIPGGTADRNQAGGGRDSGYGAKVRACVQPGVAYPPPARSGSENPTAQYRVQLGSDGKV 321
Query: 217 LGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLS 252
G G + + F
Sbjct: 322 NGVTLTSSSGNAG-----FDRAVETGIRRCNPFPKP 352
>gi|85857920|ref|YP_460122.1| hypothetical protein SYN_00165 [Syntrophus aciditrophicus SB]
gi|85721011|gb|ABC75954.1| hypothetical membrane protein [Syntrophus aciditrophicus SB]
Length = 194
Score = 46.0 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 19/113 (16%), Positives = 40/113 (35%), Gaps = 10/113 (8%)
Query: 160 ELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFK-RFKKLRVKMHFQLNQKGFVLG 218
++ + + + VR ++ ++W P R ++ + F L + G +L
Sbjct: 86 KIREATVDLNSSESRYRPYLKAVREKIESSWIYPEKASARKEQGITVIRFSLAKTGELLD 145
Query: 219 KINVDVVGGTELVRRMLRENARKAVIKSQA-FRLSPSTYKSWR-NITLFFVPS 269
+ G +L E +AV K + P ++ R N+ F
Sbjct: 146 TAIIRSSG-----FPLLDEATLRAVRK--PRYAPLPDVFQLSRLNVVATFEYR 191
>gi|301624183|ref|XP_002941407.1| PREDICTED: LOW QUALITY PROTEIN: hypothetical protein LOC100216012,
partial [Xenopus (Silurana) tropicalis]
Length = 4418
Score = 46.0 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 14/151 (9%), Positives = 35/151 (23%)
Query: 32 PISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKT 91
P + E+L + E +E + + + D +
Sbjct: 1058 PEPQPEILLIKIKEEEPDPEDHQNPMESSAAPLTDGGSPEMEPRRLEGKWENEEPDTEEP 1117
Query: 92 HATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDT 151
T G + L P + ++ + L E +
Sbjct: 1118 LPTIKREMDPVPGAGSPEPQPEILQIKEEEPDSEDHQNQMESSAAPLTDGGSPEPQPEML 1177
Query: 152 VVVRPDKKELLSKVEKSSRKRIPSQDAIAIV 182
+ + + + + S + A +
Sbjct: 1178 QIKKEEPDPEDHQTQMESSAAPLTDGDSAEL 1208
>gi|53803466|ref|YP_114753.1| TonB-dependent receptor [Methylococcus capsulatus str. Bath]
gi|53757227|gb|AAU91518.1| putative TonB-dependent receptor [Methylococcus capsulatus str.
Bath]
Length = 279
Score = 46.0 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 29/221 (13%), Positives = 51/221 (23%), Gaps = 9/221 (4%)
Query: 34 SRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHA 93
+ V + + K + Q E + Q
Sbjct: 39 DMPRVFDVAVLRLPAPEAPKRAEHRAAENQRGDDRPETVEPVPGRGAKKMTEPAQNGASR 98
Query: 94 TENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVV 153
E S + ++A + P A + + + A +
Sbjct: 99 PVTERPPRLRSNRAEHAVKAAPVVEPELEVSPAVPISAESLSRQIAEFGAAYVRQQQEA- 157
Query: 154 VRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFK-KLRVKMHFQLNQ 212
P + S + + V I N N P + +R + + L
Sbjct: 158 PHPRMVYINSVNAHKYKAAAYERAWQDKVER--IGNLNYPEEARRKDLTGSLLLSVALRP 215
Query: 213 KGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSP 253
G V G L E A + V + F P
Sbjct: 216 DGSVYKVQVRRSSGE-----PALDEAAVRIVHLAAPFAPFP 251
>gi|153003576|ref|YP_001377901.1| TonB family protein [Anaeromyxobacter sp. Fw109-5]
gi|152027149|gb|ABS24917.1| TonB family protein [Anaeromyxobacter sp. Fw109-5]
Length = 253
Score = 45.7 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 29/272 (10%), Positives = 62/272 (22%), Gaps = 41/272 (15%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPV 61
RL + S H ++ + +D K I +
Sbjct: 15 RLWPAVTFSAAAHAALIVWVVVRVPAPA-----------IDLNQ---------KPIVAKL 54
Query: 62 VQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVS 121
V+ + A ++ + S
Sbjct: 55 VRLGPKKPPEYLPRKEAPPPPAPAEAAPAPVAAPAPAAPAAPIAAIAKVDPKPATPTAKS 114
Query: 122 PYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAI 181
P K S K P + S + +A+
Sbjct: 115 PNP--------GKATSNSLASVLSKVRATAAAADPQYGDPDGDPLGDSEEGSEGDRYLAL 166
Query: 182 VRNRVIANWNIPSDFKRFKKL--RVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENA 239
V + AN+++P+ +++ + + + G + G +
Sbjct: 167 VNREIQANYDVPATISDRERMYLKATVVVYIEPDGRITRWQFETPSGNS-----AFDAAL 221
Query: 240 RKAVIKSQAFRLSPST----YKSWRNITLFFV 267
+ + K P Y+ R +T+ F
Sbjct: 222 ERTLRK-TRVPPPPDGAREDYRR-RGLTVNFT 251
>gi|15618692|ref|NP_224978.1| hypothetical protein CPn0783 [Chlamydophila pneumoniae CWL029]
gi|33242142|ref|NP_877083.1| hypothetical protein CpB0811 [Chlamydophila pneumoniae TW-183]
gi|4377092|gb|AAD18921.1| CT598 hypothetical protein [Chlamydophila pneumoniae CWL029]
gi|33236652|gb|AAP98740.1| hypothetical protein CpB0811 [Chlamydophila pneumoniae TW-183]
Length = 262
Score = 45.7 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 29/258 (11%), Positives = 62/258 (24%), Gaps = 12/258 (4%)
Query: 7 LAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKG 66
+AI+ +H LLL+ F L + + + + + +
Sbjct: 8 IAITACIHGGILLLV---FASPLPKKRLQPKAFQEKLVTIQPKPPVPTPSVVVDPAKTIR 64
Query: 67 SSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQ 126
S + + + + K + A
Sbjct: 65 PSVATQPQKQA--KCSPPQENVQKALQKPIPKVIKTEPPKPSPAPTVAKKTTATEKPPPS 122
Query: 127 KISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRV 186
K T + +++ V + +K E K + +
Sbjct: 123 TTKKNTQLSKTQLQTLSEVAQALSLHVDKIEKSETSLKNISWPSTAQLTMHSELKATQED 182
Query: 187 IANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKS 246
+ K V++ L+ G + + V + R A
Sbjct: 183 ELCELFRTHIALPSKGYVRIKLVLSPNGEIQECSFLSEVSAADKQLLTQRIQAL------ 236
Query: 247 QAFRLSPSTYKSWRNITL 264
F+ YK +NI+
Sbjct: 237 -PFQKFLEKYKVSKNISF 253
>gi|296113199|ref|YP_003627137.1| hypothetical protein MCR_0979 [Moraxella catarrhalis RH4]
gi|295920893|gb|ADG61244.1| hypothetical protein MCR_0979 [Moraxella catarrhalis RH4]
gi|326576854|gb|EGE26760.1| hypothetical protein EA1_04722 [Moraxella catarrhalis O35E]
Length = 264
Score = 45.7 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 29/243 (11%), Positives = 68/243 (27%), Gaps = 31/243 (12%)
Query: 7 LAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKG 66
+ S++LH + ++ + P + + + ++ V
Sbjct: 21 ILASVLLHTVIIIAVAAPLITPPTKPNTTIQ------------TALVGQEAFNRVKTALS 68
Query: 67 SSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQ 126
+ N + + + ++ +N+ + ++ +P++
Sbjct: 69 NHHANQNKPTATNTSSTITANDNAFMQAQNQHRYHPQVSTSATTTQAYHPPPNSAPFESN 128
Query: 127 KISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRV 186
+ ++ D S +S+ R AI V++R+
Sbjct: 129 SPNIQNQPTNAHAKLAEYSNHVSDL---------EQSSHTESTPSRAQINAAITSVKHRI 179
Query: 187 IANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKS 246
A W + +NQ+G V GG R E+ AV +
Sbjct: 180 EAIWQRYPKQP---NQTITFQVNMNQQGDVTSIQF----GGGHPDLR---ESVEAAVYAA 229
Query: 247 QAF 249
F
Sbjct: 230 APF 232
>gi|254491116|ref|ZP_05104297.1| TonB family C-terminal domain protein [Methylophaga thiooxidans
DMS010]
gi|224463629|gb|EEF79897.1| TonB family C-terminal domain protein [Methylophaga thiooxydans
DMS010]
Length = 319
Score = 45.7 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 27/243 (11%), Positives = 55/243 (22%), Gaps = 19/243 (7%)
Query: 26 NVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP-------------VVQFKGSSQENL 72
P + D +EP + +
Sbjct: 56 PSPEPTPNMPVPIAEEDPASEPVSPLPTAPTEQEPLSVIEPEPTPEPPTPEPVVAETPQE 115
Query: 73 VRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKAT 132
+ E +++ T+ E R + + + P +
Sbjct: 116 EPKPAPPEPEPPQPEKSVEMLTQQEADRHIQKVEKPETEVTPEAETVPEPEPRPSARDMM 175
Query: 133 NKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNI 192
+ + + + KK +S K + V I N N
Sbjct: 176 LQAKSEIHELQEKLNRTTKALSERPKKRRISASTKEFAAAAYMRAWEMKVER--IGNMNY 233
Query: 193 PSDFKRFK-KLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRL 251
P + ++ + + +N G V V +L E A + V +
Sbjct: 234 PQEARQKGLNGSLMLSVDINPDGSVPSGGIVISRSSG---HDVLDEAAVRIVRLGAPYAA 290
Query: 252 SPS 254
P
Sbjct: 291 IPD 293
>gi|15836316|ref|NP_300840.1| hypothetical protein CPj0783 [Chlamydophila pneumoniae J138]
gi|16752258|ref|NP_445626.1| hypothetical protein CP1089 [Chlamydophila pneumoniae AR39]
gi|7190003|gb|AAF38860.1| conserved hypothetical protein [Chlamydophila pneumoniae AR39]
gi|8979156|dbj|BAA98991.1| CT598 hypothetical protein [Chlamydophila pneumoniae J138]
Length = 262
Score = 45.7 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 29/258 (11%), Positives = 63/258 (24%), Gaps = 12/258 (4%)
Query: 7 LAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKG 66
+AI+ +H LLL+ F L + + + + + +
Sbjct: 8 IAITACIHGGILLLV---FASPLPKKRLQPKAFQEKLVTIQPKPPVPTPSVVVDPAKTIR 64
Query: 67 SSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQ 126
S + + + + K + A
Sbjct: 65 PSVATQPQKQA--KCSPPQENVQKALQKPIPKVIKTEPPKPSPAPTVAKKTTATEKPPPS 122
Query: 127 KISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRV 186
K T + +++ V + +K E K + +
Sbjct: 123 TTKKNTQLSKTQLQTLSEVAQALSLHVDKIEKSETSLKNISWPSTAQLTMHSELKATQED 182
Query: 187 IANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKS 246
+ K V++ L+ G + + V + R +A
Sbjct: 183 ELCELFRTHIALPSKGYVRIKLVLSPNGEIQECSFLSEVSAADKQLLTQRIHAL------ 236
Query: 247 QAFRLSPSTYKSWRNITL 264
F+ YK +NI+
Sbjct: 237 -PFQKFLEKYKVSKNISF 253
>gi|332664300|ref|YP_004447088.1| hypothetical protein Halhy_2338 [Haliscomenobacter hydrossis DSM
1100]
gi|332333114|gb|AEE50215.1| hypothetical protein Halhy_2338 [Haliscomenobacter hydrossis DSM
1100]
Length = 577
Score = 45.7 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 17/201 (8%), Positives = 56/201 (27%), Gaps = 7/201 (3%)
Query: 27 VQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGS----SQENLVRDFSVQENG 82
+PI++ +SV N+ + + + G E +
Sbjct: 53 SPEYIPITQPVSVSVSNVALSEALDKLFDPLPIAYKPIGGQIVLRPVEKNPPPRITNKTI 112
Query: 83 DRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGIS 142
+ DQ + + + + ++ S + +P + + + E
Sbjct: 113 PKEIDQQSPLYADPRMEEIIAERKKRWAGSSPTISGRPTPQQLNQSATSKKTEDLQATRF 172
Query: 143 FAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKL 202
+ + + + + ++ + ++ + ++F ++
Sbjct: 173 EPIIIESTASIEEEVAAPVFVSSTADTLSVVEKKKPVSRL-AQISLLPFLGTNFTESARM 231
Query: 203 RVKMHFQLN--QKGFVLGKIN 221
++ L + G V G
Sbjct: 232 TNRVSVNLLWGRNGGVEGLEI 252
>gi|121606295|ref|YP_983624.1| TonB family protein [Polaromonas naphthalenivorans CJ2]
gi|120595264|gb|ABM38703.1| TonB family protein [Polaromonas naphthalenivorans CJ2]
Length = 304
Score = 45.7 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 26/217 (11%), Positives = 60/217 (27%), Gaps = 11/217 (5%)
Query: 40 SVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETK 99
++ I + + + + Q + L + + +T + +
Sbjct: 59 PLEVILVNTKSTETPDEHAKAIAQASLAGGGELEKGRATSPLPPALVMKTGDAQEDENER 118
Query: 100 RSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKK 159
R S EQ + + ++ +S ++ + ++ +
Sbjct: 119 RQIESIKEQQTQLLLQTKKELAAMPPPDLSVPSHLRAQTEQEERRKQLIKLLAEIERRIN 178
Query: 160 ELLSKVEKS----SRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKL--RVKMHFQLNQK 213
E + + S + +R ++ + KKL + M +N
Sbjct: 179 EDGEQPARRYISPSTREEVYAVYYDAMRRKIEKKGTLNFPQMAGKKLYGELTMTMTVNAD 238
Query: 214 GFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFR 250
G VL V G L A+ V + F
Sbjct: 239 GNVLATEVVQSSGN-----PTLDRWAQSLVQGAGPFE 270
>gi|329896500|ref|ZP_08271558.1| putative TonB protein [gamma proteobacterium IMCC3088]
gi|328921717|gb|EGG29090.1| putative TonB protein [gamma proteobacterium IMCC3088]
Length = 272
Score = 45.7 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 27/239 (11%), Positives = 68/239 (28%), Gaps = 11/239 (4%)
Query: 8 AISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGS 67
++++H +L N Q + + L+V + Q
Sbjct: 13 FFAVVIHAALVL----GLNFQAATKDNSTKQLAVTLSTVNQVRHEQAFTHLAQTNQKASG 68
Query: 68 S-QENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQ 126
E VR S+ F + ++ + SS + + +
Sbjct: 69 DWDEKDVRGASLPPAEQAFEAKKGRAVDDSASNLSSQVNSRNGQFQMSPQNSAGTADGAN 128
Query: 127 KISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRV 186
+ ++ + L + ++ + P + S+ K+S + + + +
Sbjct: 129 QDPLTQSQRERLSALQLEYAQTKLALNRAPRVLRIHSQAAKASIEAEYMRLWRQRI-ETI 187
Query: 187 IANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIK 245
+ S + V++ + G +L + G +L + K V
Sbjct: 188 GNQYYPESSRRYGIYGDVRVLVAIGFDGRLLDTEVIQSSGHA-----VLDQAVLKIVRL 241
>gi|58040118|ref|YP_192082.1| hypothetical protein GOX1686 [Gluconobacter oxydans 621H]
gi|58002532|gb|AAW61426.1| Hypothetical protein GOX1686 [Gluconobacter oxydans 621H]
Length = 331
Score = 45.7 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 20/224 (8%), Positives = 45/224 (20%), Gaps = 13/224 (5%)
Query: 50 HSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQA 109
K+ + S + + + K
Sbjct: 116 QKLPDIKLPPKMTDESPEPVPASPPKPSPPSKSTMVAPPSPQT--------QKADKLPDM 167
Query: 110 LKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSS 169
K S + + + + + + V
Sbjct: 168 PKFSHMTQPNAAKKTEADSHSLLATLDNFRADQKQTHAPTAKANPPQGGAPNGGGVPNGD 227
Query: 170 RKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGF---VLGKINVDVVG 226
+ S + V + ++ + + M ++ G V
Sbjct: 228 ITKSLSMADQKAIGGSVRRCYTEDTEARNYASFVAHMVVTVDATGEARIVKFAPETAAKM 287
Query: 227 GTELVRRMLRENARKAVIK--SQAFRLSPSTYKSWRNITLFFVP 268
+ R+L E AR AV+ + + F P
Sbjct: 288 AADPSYRVLAERARDAVLSPTCAHLPIPSKMLGQTHELRFVFRP 331
>gi|117923782|ref|YP_864399.1| TonB family protein [Magnetococcus sp. MC-1]
gi|117607538|gb|ABK42993.1| Cell division and transport-associated protein TolA [Magnetococcus
sp. MC-1]
Length = 420
Score = 45.7 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 22/103 (21%), Positives = 37/103 (35%), Gaps = 7/103 (6%)
Query: 167 KSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVG 226
++ R Q A + +V ANW + L V++ Q G ++ G
Sbjct: 19 HAAPSRQAIQQWGAELVAQVEANW-LAPAGIDSHGLTVQLSIQWQSTGALIMHGIRRASG 77
Query: 227 GTELVRRMLRENARKAVIKSQAFRLSPSTYKS-WRNITLFFVP 268
+R E+ A+ +SQ P + + IT F P
Sbjct: 78 -----QRAFDESVVHAIEQSQNLPAPPVGCQICLKPITFNFAP 115
Score = 37.6 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 22/155 (14%), Positives = 38/155 (24%), Gaps = 9/155 (5%)
Query: 104 SKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRP---DKKE 160
+ E LR +++ + E D + P E
Sbjct: 255 QQPMVMTFERGSLRKAAEQTAASELAAPSPPETPALPHWLGPSWHEDAKPMEPTLHKPYE 314
Query: 161 LLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKI 220
+ + K+ VR+ + W PS + + + Q + G +
Sbjct: 315 PPPQPSSAVEKQREVAQWFQHVRHAISNQWQRPSGDIHVGR-SMMLRVQWLENGTLEWVS 373
Query: 221 NVDVVGGTELVRRMLRENARKAVIKSQAFRLSPST 255
V G E KAV P
Sbjct: 374 TVRPSGHEG-----YDETVLKAVEAVAQLPPPPEG 403
>gi|227822993|ref|YP_002826965.1| hypothetical protein NGR_c24550 [Sinorhizobium fredii NGR234]
gi|227341994|gb|ACP26212.1| hypothetical protein NGR_c24550 [Sinorhizobium fredii NGR234]
Length = 306
Score = 45.7 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 21/237 (8%), Positives = 56/237 (23%), Gaps = 19/237 (8%)
Query: 32 PISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKT 91
P E + ++ + + D + E
Sbjct: 58 PSDIVEPTEDTPEEVKPSEVPPTEEAAKEIPPTTPERVSEQPSDIAPMEADVILPADEMP 117
Query: 92 HATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDT 151
E ++S + + +K + + + +
Sbjct: 118 VTEVAEAPVTASVAPVETVVPEEKPEPEKIEKKVEKPEPKKEPIKKKKITRKKAGERGEQ 177
Query: 152 VVVRPDKKELLSKVEKSSR-------------KRIPSQDAIAIVRNRVIANWNIPSDFKR 198
+ + ++ +S + + V ++ P++ KR
Sbjct: 178 ANTQTKGQADGAENATASAATGARLSSVAREAGNAAADNYKGKVYRKLSRATRYPAEAKR 237
Query: 199 FK-KLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPS 254
+ + F + G + G G +L + A V ++ F P+
Sbjct: 238 QGLRGVAHVSFTVTSNGGLAGVSLAKSSGS-----PILDQAALDTVRRAAPFPAIPA 289
>gi|301766892|ref|XP_002918867.1| PREDICTED: LOW QUALITY PROTEIN: titin-like [Ailuropoda melanoleuca]
Length = 33410
Score = 45.7 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 12/122 (9%), Positives = 33/122 (27%), Gaps = 5/122 (4%)
Query: 29 LLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQ 88
+ + + V + +K ++ + V K + + S +
Sbjct: 10515 APKEVVPEKKVPVMPPKKPEVPPAKVPEVPKAAVPEKKVPEAVPPKPESPPPAVPEAPKE 10574
Query: 89 TKTHAT-----ENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISF 143
+ + + E + ++PV P K ++ A E +
Sbjct: 10575 VVPEKKVPVMPPKKPEVPPAKVPEAPKEVVPEKKVPVMPPKKPEVPPAKVPEVPKAAVPE 10634
Query: 144 AE 145
+
Sbjct: 10635 KK 10636
Score = 39.9 bits (91), Expect = 0.40, Method: Composition-based stats.
Identities = 10/107 (9%), Positives = 33/107 (30%), Gaps = 4/107 (3%)
Query: 50 HSSKYKKIEEPVVQFKGSSQENLV--RDFSVQENGDRFSDQTKTHATENETKRSSSSKGE 107
+ ++ + V + V V + + E + + +
Sbjct: 10252 APPRVPEVVKKAVPEAPTPVPKKVEAPPAKVPKKVPEEKVPV--PVQKKEPPPAKVPEKK 10309
Query: 108 QALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVV 154
K+ A ++PV + +K ++ ++F +++ +
Sbjct: 10310 VPEKKIAEKKVPVPKKEAVPPAKGRTVLEEKISVAFHKEEVVRERTE 10356
Score = 39.1 bits (89), Expect = 0.67, Method: Composition-based stats.
Identities = 6/73 (8%), Positives = 20/73 (27%)
Query: 49 YHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQ 108
+K ++ + V K + + + + + +
Sbjct: 10029 APPAKVPEVPKKPVPEKKVLVPVPKKVEAPPAKVPEVPKKIIPEEKPTPVPKKVEAPPPK 10088
Query: 109 ALKESALLRMPVS 121
K+ + +PV+
Sbjct: 10089 VPKKREPVPVPVA 10101
>gi|72080772|ref|YP_287830.1| hypothetical protein MHP7448_0439 [Mycoplasma hyopneumoniae 7448]
Length = 695
Score = 45.7 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 19/176 (10%), Positives = 49/176 (27%), Gaps = 2/176 (1%)
Query: 33 ISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTH 92
++ + + N N D S K + S E + + T
Sbjct: 4 LTISPSIILKNNPNTDNFSPVANTDYIQPPPKKEVPEAPKPTPPSETEKKPVYIPEIPTV 63
Query: 93 ATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTV 152
+ + + ++ K + +K Q + + +
Sbjct: 64 KKTDLKPEINLEEKSKSKKNETAAIIIAPTILPNPPKSDLSKNQPAPAGAQTVLPKEEPI 123
Query: 153 VVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHF 208
+ RP + + K ++ R S + ++ + + +K R++ H
Sbjct: 124 ITRPRQNAPIPKKDEYQRVD-LSGKYGSAIQTLIQRT-RYNISARTTEKNRIEQHI 177
>gi|134095917|ref|YP_001100992.1| hypothetical protein HEAR2754 [Herminiimonas arsenicoxydans]
Length = 249
Score = 45.7 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 25/201 (12%), Positives = 57/201 (28%), Gaps = 15/201 (7%)
Query: 59 EPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRM 118
+ K + + R + + + + +A + + + +
Sbjct: 27 ADAGRAKSPLPDFRKSEDGDSAKAARRKVEELERHQQKLLSQLARKTPFRAPQVTDVEPV 86
Query: 119 PVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDA 178
P + + + L +S++ RP K ++ +
Sbjct: 87 KDLPPQRNAT-DMLDSAKALLRREAEIARSVEDYNKRPKKTQVTPSTREVGYAA-----Y 140
Query: 179 IAIVRNRVIANWNIPSDFKRFKKLR--VKMHFQLNQKGFV---LGKINVDVVGGTELVRR 233
++R+ + K KKL + + + Q G + G V+ G
Sbjct: 141 YKAFQDRIEKYGTLNFPQKDGKKLYGDLILFIPIFQDGTIYMKDGGPRVERSSGN----P 196
Query: 234 MLRENARKAVIKSQAFRLSPS 254
L + A V +S F P
Sbjct: 197 ALDQAALNIVRRSVPFGKFPE 217
>gi|91788753|ref|YP_549705.1| TonB-like protein [Polaromonas sp. JS666]
gi|91697978|gb|ABE44807.1| Cell division and transport-associated protein TolA [Polaromonas
sp. JS666]
Length = 296
Score = 45.7 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 29/246 (11%), Positives = 61/246 (24%), Gaps = 26/246 (10%)
Query: 24 NFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFS----VQ 79
+ + + E ++ E P + + +
Sbjct: 39 GVHWKRSDRAASFEAELWSSVPQEAAPKLVETPPPPPPPPEPKAPEVRVTPPTPNVDIAL 98
Query: 80 ENGDRFSDQTKTHATENETKRSSSSKGEQA---------------LKESALLRMPVSPYD 124
E + + E + K + K A +
Sbjct: 99 EQEKKRKLLQQQKEAETLKAQKLQEKLKAELQAKKEKEQKAKEELAKRKAAEEAQKTEAK 158
Query: 125 KQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRN 184
KQ K+Q + +++ ++ + + PS VR
Sbjct: 159 KQDAKDLEKKKQAEALAQKQRQDALNRMMGLAGATGDANAKGSGQKSSGPSAGYAGKVRA 218
Query: 185 RVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVI 244
RV+ N D ++ + G +LG+ V G + E KA+I
Sbjct: 219 RVLPNVVFTEDI--AGNPTAEVEVRSTPDGVILGQRLVKSSGN-----KAWDEAVIKAII 271
Query: 245 KSQAFR 250
++
Sbjct: 272 RTGTLP 277
>gi|148827588|ref|YP_001292341.1| cell envelope integrity inner membrane protein TolA [Haemophilus
influenzae PittGG]
gi|148718830|gb|ABQ99957.1| hypothetical protein CGSHiGG_05075 [Haemophilus influenzae PittGG]
Length = 410
Score = 45.7 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 22/176 (12%), Positives = 54/176 (30%), Gaps = 1/176 (0%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
AIS++LH + LL + + + E D I + + + Q K
Sbjct: 12 AFAISILLHFILFGLLILSSLYHTVEIMGGGEGEG-DVIGAVIVDTGTAAQEWGRIQQQK 70
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
+ R V E +Q + + ++ + ++ K+ R K
Sbjct: 71 KGQSDKQKRPEPVVEEKPPEPNQEEIKHQQEVQRQEELKRQQEIKKQQEQARQEALEKQK 130
Query: 126 QKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAI 181
Q + + + + + ++E +K + + ++ +
Sbjct: 131 QAEEARAKQAAEAAKLKADAEAKRLAAAAKQAEEEAKAKAAEIAAQKAKQEAEAKA 186
Score = 42.2 bits (97), Expect = 0.083, Method: Composition-based stats.
Identities = 13/123 (10%), Positives = 36/123 (29%), Gaps = 12/123 (9%)
Query: 147 KSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKM 206
+ + S +++ + + +F ++
Sbjct: 296 SASKGGNTNKGGTQGSGAALGSGDGGKVGDQYAGVIKKEIQRRFLKDPNFAGK---VCRI 352
Query: 207 HFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSP--STYKSWRNITL 264
QL + G +LG + + A AV +++ +P Y+ +++ +
Sbjct: 353 KIQLGRDGTILGYQKISGSDD-------ICSAALSAVARTKKVPAAPSDEIYEKYKSPII 405
Query: 265 FFV 267
F
Sbjct: 406 DFD 408
>gi|189463786|ref|ZP_03012571.1| hypothetical protein BACINT_00119 [Bacteroides intestinalis DSM
17393]
gi|189438736|gb|EDV07721.1| hypothetical protein BACINT_00119 [Bacteroides intestinalis DSM
17393]
Length = 277
Score = 45.7 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 25/232 (10%), Positives = 66/232 (28%), Gaps = 4/232 (1%)
Query: 6 GLAISMILHVMFLLLLYF-NFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQF 64
G+ ++++HV F+LLL F + ++ + K++
Sbjct: 14 GIVGALLVHVAFILLLILVGFALPEQQDEDGMPVMLGEVPNAFGSADPSLVKVDVMPETV 73
Query: 65 KGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYD 124
QE + ++ QE+ + + K + E K+ + +++ R
Sbjct: 74 APKVQETVEQEMLTQEDEETVVIKPKAEPKKEEVKKKPEKPEKTEAEKAEEARKLAEAKA 133
Query: 125 KQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQ---DAIAI 181
+++ +A + +F + + + S + +
Sbjct: 134 ERERREAEEAARKRVAGAFGKGAQMGSKGTTEGTGIQGSPTGNAPEGASSGTGGYGTFDL 193
Query: 182 VRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRR 233
+ + + V + +N G V+ R
Sbjct: 194 GGRSIGQGGLPRPAYNVQDEGIVVVSITVNPAGHVIATRIDRKTNTINSALR 245
>gi|56460189|ref|YP_155470.1| TolA-like protein [Idiomarina loihiensis L2TR]
gi|56179199|gb|AAV81921.1| TolA-like protein [Idiomarina loihiensis L2TR]
Length = 267
Score = 45.7 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 30/228 (13%), Positives = 78/228 (34%), Gaps = 12/228 (5%)
Query: 44 IYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSS 103
I + + + +K E Q K + + + +++ + A +R+ +
Sbjct: 49 IERLERRAEEARKAREREEQRKKEIERQQELEKQEAAEARKQAERERKEAERLAQERAKA 108
Query: 104 SKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLS 163
+ + +++ K +++ + + + +++
Sbjct: 109 EAAAKEAERRKREAEEAERRAEEERRKRLEEQRKREQEQREAAEREAQLQKEMEEERARR 168
Query: 164 KVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVD 223
+ + + + A+++ + NWN+ + ++ ++ GFV VD
Sbjct: 169 QAARRQQVLSEVEKYQALIQQTIQRNWNVDDSMQGK---SCELTIRVAPSGFVKS---VD 222
Query: 224 VVGGTELVRRMLRENARKAVIKSQAFRLS--PSTYKSWRNITLFFVPS 269
G V R +A+ AV+K+ +S P Y+ I L P
Sbjct: 223 TGSGDANVCR----SAQNAVLKATTLPVSEDPEIYEQMSTIKLTVKPQ 266
>gi|170691330|ref|ZP_02882495.1| protein TolA [Burkholderia graminis C4D1M]
gi|170143535|gb|EDT11698.1| protein TolA [Burkholderia graminis C4D1M]
Length = 337
Score = 45.3 bits (105), Expect = 0.008, Method: Composition-based stats.
Identities = 17/115 (14%), Positives = 29/115 (25%), Gaps = 8/115 (6%)
Query: 136 QDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSD 195
+ A+ + + S S S VR V N S
Sbjct: 212 DAERRARLAQMQGMAGPPGSTGNGLGKSGTGSGSGGNAASPGYADKVRRVVRPN---ISW 268
Query: 196 FKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFR 250
+ L + + + G +L G + A +AV +S
Sbjct: 269 GGETEGLETVIAVRCSPTGTLLSATIAHSSGNA-----AWDDAALRAVQRSDPMP 318
>gi|167571053|ref|ZP_02363927.1| TolA protein [Burkholderia oklahomensis C6786]
Length = 337
Score = 45.3 bits (105), Expect = 0.008, Method: Composition-based stats.
Identities = 26/208 (12%), Positives = 55/208 (26%), Gaps = 9/208 (4%)
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
+ + Q ++ + E + Q + K+ ++ + +
Sbjct: 139 EREKQKQAEKLKQQQLAEQQRKLEQQKLEQQKLEQQKKQEQLAAQKKANAEKAEKAAKAA 198
Query: 123 YDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIV 182
+ + A K + A+ + I + S S S V
Sbjct: 199 AAAKANAAANAKLDKERQARLAQLQGIAGGGSGGGEGLAKSGTGTGSGGNAASPGYADKV 258
Query: 183 RNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKA 242
R RV N L + + G VL G + + A
Sbjct: 259 RRRVKPN---IVWAGERDSLVTVVAIRCTPSGDVLSTSIRRSSGNSGW-----DQAVISA 310
Query: 243 VIKSQAFRLSPSTYKSWRNITLFFVPSK 270
+ S + ++ IT+ F ++
Sbjct: 311 IQASVPLP-PDTNGRTPAEITITFKAAE 337
>gi|145634621|ref|ZP_01790330.1| cell envelope integrity inner membrane protein TolA [Haemophilus
influenzae PittAA]
gi|145268166|gb|EDK08161.1| cell envelope integrity inner membrane protein TolA [Haemophilus
influenzae PittAA]
Length = 392
Score = 45.3 bits (105), Expect = 0.008, Method: Composition-based stats.
Identities = 14/123 (11%), Positives = 37/123 (30%), Gaps = 12/123 (9%)
Query: 147 KSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKM 206
+ + S +++ + + F ++
Sbjct: 278 SASKGGNTNKGGTQGSGAALGSGDGGKVGDQYAGVIKKEIQRRFLKDPSFAGK---VCRI 334
Query: 207 HFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSP--STYKSWRNITL 264
QL + G +LG + G + + A AV +++ +P Y+ +++ +
Sbjct: 335 KIQLGRDGTILGYQKI--SGPDD-----ICSAALSAVARTKKVPAAPSDEIYEKYKSPII 387
Query: 265 FFV 267
F
Sbjct: 388 DFD 390
Score = 41.4 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 16/100 (16%), Positives = 33/100 (33%)
Query: 4 ENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQ 63
N AIS++LH + LL + + + E + ++ Q
Sbjct: 10 TNAFAISILLHFILFGLLILSSLYHTVEIMGGGEGEGDAIGAVIVDTGTAAQEWGRIQQQ 69
Query: 64 FKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSS 103
KG + + + V+E + + H E + +
Sbjct: 70 KKGQADKQKRPEPVVEEKPPEPNQEEIKHQQEVQRQEELK 109
>gi|91782414|ref|YP_557620.1| TonB protein [Burkholderia xenovorans LB400]
gi|91686368|gb|ABE29568.1| TonB protein [Burkholderia xenovorans LB400]
Length = 178
Score = 45.3 bits (105), Expect = 0.008, Method: Composition-based stats.
Identities = 14/109 (12%), Positives = 28/109 (25%), Gaps = 18/109 (16%)
Query: 164 KVEKSSRKRIPSQDAIAIV-RNRVIANWNIPSDFKRFKKLR--VKMHFQLNQKGFVLGKI 220
++ V R + N + LR V + F +++ G V+
Sbjct: 53 STPAAALNSATLDQYRDAVARRIIERNPSYVLRGTPQAMLRSLVVVSFTVDRNGRVVESS 112
Query: 221 NVDVVGGTELVRRMLRENARKAVIKSQAFRLSP----------STYKSW 259
G E A + ++ P ++ W
Sbjct: 113 VYRTNGDDE-----AESTALATLRRAAPLPQPPGRLLNGRGQLELFEDW 156
>gi|53804449|ref|YP_113692.1| TolA protein [Methylococcus capsulatus str. Bath]
gi|53758210|gb|AAU92501.1| putative TolA protein [Methylococcus capsulatus str. Bath]
Length = 467
Score = 45.3 bits (105), Expect = 0.008, Method: Composition-based stats.
Identities = 23/121 (19%), Positives = 42/121 (34%), Gaps = 9/121 (7%)
Query: 150 DTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQ 209
+ + + +E L+ + +R ++ A ++ RV W PS + L + +
Sbjct: 352 EDARRKAELEEQLNNERRELAEREANKWANRYIKPRVEGLWLKPSAARG--GLFCIIQVR 409
Query: 210 LNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLS--PSTYKSWRNITLFFV 267
G V+ V G +A AV K+ + P R+ T F
Sbjct: 410 TLGDGTVVEARVVKSSGDA-----AFDRSAESAVKKASPLPMPSDPRVAAELRSFTFKFE 464
Query: 268 P 268
P
Sbjct: 465 P 465
>gi|256114240|ref|ZP_05454985.1| TonB-dependent receptor [Brucella melitensis bv. 3 str. Ether]
gi|265995546|ref|ZP_06108103.1| TonB [Brucella melitensis bv. 3 str. Ether]
gi|262766830|gb|EEZ12448.1| TonB [Brucella melitensis bv. 3 str. Ether]
Length = 283
Score = 45.3 bits (105), Expect = 0.008, Method: Composition-based stats.
Identities = 23/241 (9%), Positives = 66/241 (27%), Gaps = 15/241 (6%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
L G+ + +++H +++ + + V+ + + + + E
Sbjct: 31 LGAGILV-LLVHAAGAYVIHMA-QEDNQPEGTEVAAMVVELVPDLVAPAEERVSEEVQPE 88
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETK--RSSSSKGEQALKESALLRMPV 120
+E + + Q E + + +
Sbjct: 89 TTTEQPEEVQPEPEPEPQPEAKAEPQQVQEPEEVIPDVVEAQKPEP----------KKVE 138
Query: 121 SPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIA 180
++ + ++ + E + K + E S+ + +
Sbjct: 139 KLKPQKPKPEKVKPKKAEKAAETREASAPRVDADNGAKVAASKRGETSASAGVIWAKWTS 198
Query: 181 IVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENAR 240
+++ + N R + + F ++ G VL G + + L E AR
Sbjct: 199 RLQSHMARNARFLQGKSRNTRGEAHVAFVIDPSGNVLSARIAVSSGDPAVDQLAL-EAAR 257
Query: 241 K 241
+
Sbjct: 258 R 258
>gi|118579891|ref|YP_901141.1| TonB family protein [Pelobacter propionicus DSM 2379]
gi|118502601|gb|ABK99083.1| outer membrane transport energization protein TonB [Pelobacter
propionicus DSM 2379]
Length = 265
Score = 45.3 bits (105), Expect = 0.008, Method: Composition-based stats.
Identities = 28/254 (11%), Positives = 64/254 (25%), Gaps = 7/254 (2%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNE-DYHSSKYKKIEEP 60
R L +S+++H L LY + V + P
Sbjct: 3 RQRKSLCLSLLIHGALLSSLYAVSSSSAWQSAPVVIDFDVSSGAAPVGAPGPLPAGPAAP 62
Query: 61 VVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPV 120
+ + + +T +N + + +A+ +
Sbjct: 63 RPAARSNPAPRPRAVAPLPPAPVAPRSAPRTALEQNGPAAIVAPQKREAVATAQGEGQTR 122
Query: 121 SPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIA 180
+ G + + ++ A
Sbjct: 123 AIVPDGPPGSPGGVGSVPPGGGSGGGGNGGGGSGSETGGGSGGGATAEQLRNRYLREHFA 182
Query: 181 IVRNRVIANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENA 239
+R+ + N + P+ ++F +V + F +++ G V + V G +L N
Sbjct: 183 YIRDLIQKNISYPARARKFGWAGKVVVTFIIHESGKVSNERVVASSGHN-----LLDNNV 237
Query: 240 RKAVIKSQAFRLSP 253
+ F P
Sbjct: 238 IDTIRDVSPFPRPP 251
>gi|71893788|ref|YP_279234.1| hypothetical protein MHJ_0437 [Mycoplasma hyopneumoniae J]
Length = 695
Score = 45.3 bits (105), Expect = 0.008, Method: Composition-based stats.
Identities = 19/177 (10%), Positives = 50/177 (28%), Gaps = 2/177 (1%)
Query: 33 ISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTH 92
++ + + N N D S K + S E + + T
Sbjct: 4 LTISPSIILKNNPNTDNFSPVANTDYIQPPPKKEVPEAPKPTPPSETEKKPVYIPEIPTV 63
Query: 93 ATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTV 152
+ + + ++ K + +K Q + + +
Sbjct: 64 KKTDLKPEINLEEKSKSKKNETAAIIIAPTILPNPPKSDLSKNQPAPAGAQTVLPKEEPI 123
Query: 153 VVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQ 209
+ RP + + K ++ R S + ++ + + +K R++ H +
Sbjct: 124 ITRPRQNAPIPKKDEYQRVD-LSGKYGSAIQTLIQRT-RYNISARTTEKNRIEQHIE 178
>gi|90416201|ref|ZP_01224133.1| hypothetical protein GB2207_11003 [marine gamma proteobacterium
HTCC2207]
gi|90331926|gb|EAS47140.1| hypothetical protein GB2207_11003 [marine gamma proteobacterium
HTCC2207]
Length = 441
Score = 45.3 bits (105), Expect = 0.008, Method: Composition-based stats.
Identities = 25/218 (11%), Positives = 62/218 (28%), Gaps = 17/218 (7%)
Query: 49 YHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQ 108
S+ V E T+ T +
Sbjct: 211 KQSNPEAVALLKTVTTDPQRVSLAASWILPPEPAAVAERLTERATTVKSVISVNPKAKLA 270
Query: 109 ALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEK- 167
A+ +A + Q + + ++ I+ ++ + + E ++ +
Sbjct: 271 AVATTANIGTKPIATQGQSEEQNKEQSAAVKLIADSDNAGSKSGSLAKASVETVAADSEI 330
Query: 168 ----------SSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFK-KLRVKMHFQLNQKGFV 216
S + + +D +V ++ + PS + V+M +++ G +
Sbjct: 331 NADIEDEVDFSITEALAMRDYTPLVVQKIYKKISYPSRAIDRGLEGTVRMSIVVSKSGAL 390
Query: 217 LGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPS 254
I + +L + A KA ++ F P+
Sbjct: 391 KKVIVAQKSRHS-----ILNKAAIKATERAAPFPELPA 423
>gi|326559274|gb|EGE09702.1| hypothetical protein E9K_10148 [Moraxella catarrhalis 103P14B1]
gi|326573330|gb|EGE23298.1| hypothetical protein E9Y_08756 [Moraxella catarrhalis 101P30B1]
Length = 260
Score = 45.3 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 36/243 (14%), Positives = 72/243 (29%), Gaps = 33/243 (13%)
Query: 7 LAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKG 66
+ S++LH + ++ + L+ P + + E +HS+K I Q K
Sbjct: 21 ILASVLLHAVIIIAVA----APLMTPPKPNTAIQTTLVGQEAFHSAKTALINHHTNQNK- 75
Query: 67 SSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQ 126
+ + Q + + +++++ L SA P++
Sbjct: 76 -PTADNASSTITANDNAFMHAQNQHRYRPQVSTSATTTQAYHPLPNSA-------PFESN 127
Query: 127 KISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRV 186
S + + L + + R AI+ V++R+
Sbjct: 128 SPSIQNQPTNAHAKL----------AEYSNNDSGLEQNHTEPTPSRAQINAAISSVKHRI 177
Query: 187 IANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKS 246
W + +NQ+G V GG L E+ AV +
Sbjct: 178 ETIWQRYPKQP---NQTITFQVNMNQQGDVTSIQF----GGGHPD---LHESVEAAVYAA 227
Query: 247 QAF 249
F
Sbjct: 228 APF 230
>gi|254511018|ref|ZP_05123085.1| TonB family C-terminal domain protein [Rhodobacteraceae bacterium
KLH11]
gi|221534729|gb|EEE37717.1| TonB family C-terminal domain protein [Rhodobacteraceae bacterium
KLH11]
Length = 365
Score = 45.3 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 28/220 (12%), Positives = 52/220 (23%), Gaps = 6/220 (2%)
Query: 24 NFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGD 83
E VD++ S + P V S V
Sbjct: 130 TVTSAEPAATQPVEAEPVDDVAQAPVTSEPEQLAALPPVDTPTSDPVTPPEQAEVSPEST 189
Query: 84 RFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK-QKISKATNKEQDLQGIS 142
++ + + S + R P N Q +
Sbjct: 190 EVVEEPVQEEADIDAGASEQAVLASKRPRLPDRRPAAEPEPTLDGFRSFDNLRNPQQVVE 249
Query: 143 FAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKL 202
+ S+ R + + V + + + F
Sbjct: 250 SPLTRYQKEGADPFRVSSGQSQQGGRGRGNSSTTNYAGEVLVHLNRAPVVFVTVRGF--- 306
Query: 203 RVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKA 242
++ F++N G + VD G + + R RE R+A
Sbjct: 307 -AQVFFEINPDGSLAWVNIVDSSG-SRELERAAREQIRRA 344
>gi|163751258|ref|ZP_02158486.1| tolA protein [Shewanella benthica KT99]
gi|161328972|gb|EDQ00046.1| tolA protein [Shewanella benthica KT99]
Length = 309
Score = 45.3 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 38/317 (11%), Positives = 95/317 (29%), Gaps = 64/317 (20%)
Query: 7 LAISMILHVMFLLLLYFNFNVQLLVPISRR------EMLSVDNIYNEDYHSSKYKKIEEP 60
+ IS +H+ L+++ + + + + VD + + E
Sbjct: 1 MIISAGIHIGMLIIIALGMDFSDKPKPQPQVRALAMKAVVVDQKLVAQHVERLKAEKREV 60
Query: 61 VVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSS---------------K 105
+ K + R ++ +R Q K E + K + +
Sbjct: 61 ARKEKARQDDLERRATEARQQREREQAQIKKLEIERKQKEIETKNALAAAKAAQLKLKQE 120
Query: 106 GEQALKESALLRMPVSPYD-------------KQKISKATNKEQDLQGISFAEKKSIDTV 152
E+AL+ + KQ+ + A + + + A++K +
Sbjct: 121 KEKALQAEEFRKQKEKERQASEEAAKKAEAKLKQEEAAAKKAADERKRKAEADRKRKEDA 180
Query: 153 VVRPDKKELLSKVEKSSRKRIPS------------------QDAIAIVRNRVIANWNIPS 194
+ +E ++++ + + Q +++R + + +
Sbjct: 181 ERKRKAEERERQLQEQMMQDALAEEQAALSQTRNRQVMSEVQRYTSMIRATIQRHLLVDE 240
Query: 195 DFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLS-- 252
+ ++ +L GFV G + + + A+ K+ +S
Sbjct: 241 SMRGK---TCRVFIRLANDGFVTGTKILSGDS-------AVCHATQAAINKAGRLPVSSE 290
Query: 253 PSTYKSWRNITLFFVPS 269
P+ Y + I L P
Sbjct: 291 PNVYNELKEINLTVQPE 307
>gi|189220213|ref|YP_001940853.1| Periplasmic protein TonB [Methylacidiphilum infernorum V4]
gi|189187071|gb|ACD84256.1| Periplasmic protein TonB [Methylacidiphilum infernorum V4]
Length = 232
Score = 45.3 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 10/117 (8%), Positives = 29/117 (24%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
G +S + H + L + + + + ++ + + + + K +P
Sbjct: 50 GWILSFLFHALLLFGIGLSLFPKSSPQMPALPPSMIELVPSPEPQQPQSKTEPQPPPLRP 109
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
+ +V+ + Q + A R
Sbjct: 110 DDMVKAVVQKPKALQKKPAPRPQQPSLAQRVTAMALPDYLRNPPPIYPEEARRKGEQ 166
>gi|220925038|ref|YP_002500340.1| hypothetical protein Mnod_5191 [Methylobacterium nodulans ORS 2060]
gi|219949645|gb|ACL60037.1| conserved hypothetical protein [Methylobacterium nodulans ORS 2060]
Length = 162
Score = 45.3 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 11/66 (16%), Positives = 21/66 (31%), Gaps = 3/66 (4%)
Query: 186 VIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIK 245
+ A W R + + + L + G + G +V RR L A+
Sbjct: 72 LAACWTPLPGLGRAQ---ITLRLSLTRDGRLQGPPHVTYSSLPLERRRPLASATLDALHA 128
Query: 246 SQAFRL 251
++
Sbjct: 129 CTPVQV 134
>gi|153824219|ref|ZP_01976886.1| tolA protein [Vibrio cholerae B33]
gi|126518259|gb|EAZ75484.1| tolA protein [Vibrio cholerae B33]
Length = 328
Score = 45.3 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 20/183 (10%), Positives = 63/183 (34%), Gaps = 2/183 (1%)
Query: 5 NGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNI--YNEDYHSSKYKKIEEPVV 62
+ IS+ +H + +L + + + P +M+ I + + + E
Sbjct: 13 KSITISLAMHGALVAILLWGADFTMSDPEPTGQMIEAVVIDPQLVRQQAQQIRSQREEAA 72
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
+ + + L R+ E + ++ E + K + +++ + L+E +
Sbjct: 73 KKEQERLDKLRRESEQLEKNRQAEEERIRQLKEQQAKEAKAAREAEKLREQKEQERLAAE 132
Query: 123 YDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIV 182
++ + K + + + K + V + ++ ++ R++
Sbjct: 133 QKAREEKERAAKAEAERKVKEEAAKKAEQERVAKEAAAAKAEQQRIEREKEAKLAEEKAK 192
Query: 183 RNR 185
R +
Sbjct: 193 REK 195
>gi|170748497|ref|YP_001754757.1| TonB family protein [Methylobacterium radiotolerans JCM 2831]
gi|170655019|gb|ACB24074.1| TonB family protein [Methylobacterium radiotolerans JCM 2831]
Length = 126
Score = 45.3 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 13/60 (21%), Positives = 20/60 (33%), Gaps = 5/60 (8%)
Query: 195 DFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPS 254
+ V +H Q+ G V G + G L E A +AV + P+
Sbjct: 53 PGPDRGRGTVIVHVQIAADGAVQGAEIEESSGSPR-----LDERALRAVQGISPAPVPPA 107
>gi|145493278|ref|XP_001432635.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124399748|emb|CAK65238.1| unnamed protein product [Paramecium tetraurelia]
Length = 1146
Score = 45.3 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 10/127 (7%), Positives = 24/127 (18%)
Query: 47 EDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKG 106
+ + I + + GD + T + K +
Sbjct: 210 KPKDPTPTIVIPPKPRDPTPTIVIPPKPRDPTPKPGDPTKPEDPTKPRDPTPKPGDPTPK 269
Query: 107 EQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVE 166
+ P P SK + + + D + +
Sbjct: 270 PGDPTKPGDPTKPGDPTKPGDPSKPEDPTKPGDPTKPGDPTKPGDPTKPGDPTKPGDPTK 329
Query: 167 KSSRKRI 173
+
Sbjct: 330 PGDPTKP 336
Score = 40.3 bits (92), Expect = 0.31, Method: Composition-based stats.
Identities = 5/128 (3%), Positives = 19/128 (14%), Gaps = 1/128 (0%)
Query: 47 EDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSS-SSK 105
K + + + + +
Sbjct: 215 TPTIVIPPKPRDPTPTIVIPPKPRDPTPKPGDPTKPEDPTKPRDPTPKPGDPTPKPGDPT 274
Query: 106 GEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKV 165
+ P P + +K + + + D +
Sbjct: 275 KPGDPTKPGDPTKPGDPSKPEDPTKPGDPTKPGDPTKPGDPTKPGDPTKPGDPTKPGDPT 334
Query: 166 EKSSRKRI 173
+ +
Sbjct: 335 KPEDPTKP 342
Score = 37.6 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 15/144 (10%), Positives = 30/144 (20%)
Query: 30 LVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQT 89
PI+ + I H E+P V + D T
Sbjct: 169 QKPITINIEGEIRKIQIIRGHCDNTPTPEQPPVIPVDPIPIKPKDPTPTIVIPPKPRDPT 228
Query: 90 KTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSI 149
T + + + G+ E +P K + + +
Sbjct: 229 PTIVIPPKPRDPTPKPGDPTKPEDPTKPRDPTPKPGDPTPKPGDPTKPGDPTKPGDPTKP 288
Query: 150 DTVVVRPDKKELLSKVEKSSRKRI 173
D + + +
Sbjct: 289 GDPSKPEDPTKPGDPTKPGDPTKP 312
>gi|87118953|ref|ZP_01074851.1| TolA protein [Marinomonas sp. MED121]
gi|86165344|gb|EAQ66611.1| TolA protein [Marinomonas sp. MED121]
Length = 343
Score = 45.3 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 27/193 (13%), Positives = 61/193 (31%), Gaps = 12/193 (6%)
Query: 84 RFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISF 143
+ E K + + K EQ + ++++ K Q+ +
Sbjct: 156 KKRLAQDAKKAEAAKKLAEAKKKEQEKLNQQRAEAERKRVETARLAEEQKKRQEEAKRAL 215
Query: 144 AEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLR 203
AE+ + + + +K ++ + Q A++ R+ + W P + ++
Sbjct: 216 AEETARQEALAVELALQEEAKKQQEIAEASARQSMSALIDQRIRSRWIRPPNA--INGMK 273
Query: 204 VKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAF----RLSPSTYKS- 258
++ G V G + + AV K L P ++
Sbjct: 274 TQLRIFFLPTGEVDLVNVTKSSGDA-----LFDQRTVDAVYKMGRIEELAELDPFVFERN 328
Query: 259 WRNITLFFVPSKM 271
+R + L F P +
Sbjct: 329 FRQVDLIFNPQDL 341
>gi|84388528|ref|ZP_00991075.1| tolA protein [Vibrio splendidus 12B01]
gi|84377077|gb|EAP93948.1| tolA protein [Vibrio splendidus 12B01]
Length = 355
Score = 45.3 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 21/168 (12%), Positives = 59/168 (35%), Gaps = 2/168 (1%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNI--YNEDYHSSKYKKIEE 59
+ L IS+ LHV+ + L + + + P +M+ I + + ++ E
Sbjct: 10 NFRSPLLISLGLHVILFVALIWGADFTMSEPKPTGQMVQAVVIDPQLVRQQAQQIRQQRE 69
Query: 60 PVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMP 119
+ + + L R+ E + ++ E + K + +++ + + +
Sbjct: 70 AASKKEQERLDKLRRESERLEKNRKAEEENIRKLKEKQAKEAKAAREAEKRRVENEKQRK 129
Query: 120 VSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEK 167
V ++ K K + + + A + + ++ E+
Sbjct: 130 VEETRLKQEQKKAAKAEADRKLKEAAVVKAEKERKAKEVAIAKAEQER 177
Score = 43.0 bits (99), Expect = 0.051, Method: Composition-based stats.
Identities = 26/229 (11%), Positives = 75/229 (32%), Gaps = 10/229 (4%)
Query: 43 NIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSS 102
+ + + + +E ++ ++ + + K + R
Sbjct: 135 LKQEQKKAAKAEADRKLKEAAVVKAEKERKAKEVAIAKAEQERVAKEKAAKEAADKARKE 194
Query: 103 SSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELL 162
E+A K+ + + + +K KA + ++ +++ + + +
Sbjct: 195 KEAAERAEKQ-RIAKEKEAAAAAEKARKAKEAAAKAEKERKQQEAALNDIFAGLETESTQ 253
Query: 163 SKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINV 222
+ + +Q AI + N + ++ +++ +L G +
Sbjct: 254 NSSARQQFISDEAQRYGAIYTQLIQQNLLLEDSYRGR---SCRVNLKLIPTG---SNAIL 307
Query: 223 DVVGGTELVRRMLRENARKAVIKSQAFRLS--PSTYKSWRNITLFFVPS 269
+ + R+ ++AV + Q++ L P KS ++I L P
Sbjct: 308 GSLSILDGDSRLCA-ATKRAVAQVQSYPLPKDPDIVKSLKDINLTVSPE 355
>gi|229529140|ref|ZP_04418530.1| TolA protein [Vibrio cholerae 12129(1)]
gi|229332914|gb|EEN98400.1| TolA protein [Vibrio cholerae 12129(1)]
Length = 356
Score = 45.3 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 20/183 (10%), Positives = 63/183 (34%), Gaps = 2/183 (1%)
Query: 5 NGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNI--YNEDYHSSKYKKIEEPVV 62
+ IS+ +H + +L + + + P +M+ I + + + E
Sbjct: 13 KSITISLAMHGALVAILLWGADFTMSDPEPTGQMIEAVVIDPQLVRQQAQQIRSQREEAA 72
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
+ + + L R+ E + ++ E + K + +++ + L+E +
Sbjct: 73 KKEQERLDKLRRESEQLEKNRQAEEERIRQLKEQQAKEAKAAREAEKLREQKEQERLAAE 132
Query: 123 YDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIV 182
++ + K + + + K + V + ++ ++ R++
Sbjct: 133 QKAREEKERAAKAEAERKVKEEAAKKAEQERVAKEVAAAKAEQQRIEREKEAKLAEEKAK 192
Query: 183 RNR 185
R +
Sbjct: 193 REK 195
Score = 41.0 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 28/226 (12%), Positives = 74/226 (32%), Gaps = 10/226 (4%)
Query: 47 EDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKG 106
E ++K + + + +++ V ++ + + A E K +
Sbjct: 138 EKERAAKAEAERKVKEEAAKKAEQERVAKEVAAAKAEQQRIEREKEAKLAEEKAKREKEV 197
Query: 107 EQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVE 166
++ L + + K K + + A++ +++ + ++ +
Sbjct: 198 AAKAEQERLAKEKAAKEAADKAKKEKERAAKAEAERKAQEAALNDIFGSLSEESQQNNAA 257
Query: 167 KSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVG 226
+ AI + N + F+ + +++ +L G ++ V+
Sbjct: 258 RQQFVTSEVGRYGAIYTQLIRQNLLVEDSFRGKQ---CRVNLKLIPTGTGALLGSLTVLD 314
Query: 227 GTELVRRMLRENARKAVIKSQAFRLS---PSTYKSWRNITLFFVPS 269
G L ++AV + +F L P + +NI L P
Sbjct: 315 GDSR----LCAATKRAVAQVNSFPLPKDQPDVVEKLKNINLTVAPE 356
>gi|1685079|gb|AAC44596.1| TolA [Haemophilus influenzae]
Length = 382
Score = 45.3 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 20/178 (11%), Positives = 54/178 (30%), Gaps = 5/178 (2%)
Query: 6 GLAISMILHVMFLLLLYFN-----FNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP 60
AIS++LH + LL + + + +V + ++
Sbjct: 12 AFAISILLHFILFGLLILSSLYHTVEIMGGGEGEGDAIGAVIVDTGTAAQEWGRIQQQKK 71
Query: 61 VVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPV 120
K E +V + + N + Q + E ++ + ++ K+ R
Sbjct: 72 GQADKQKRPEPVVEEKPPEPNQEEIKHQQEVQRQEELKRQQEQQRQQEIKKQQEQARQEA 131
Query: 121 SPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDA 178
KQ + + + + + ++E +K + + ++ +
Sbjct: 132 LEKQKQAEEARAKQAAEAAKLKADAEAKRLAAAPKQAEEEAKAKAAEIAAQKAKQEAE 189
Score = 41.0 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 14/123 (11%), Positives = 37/123 (30%), Gaps = 12/123 (9%)
Query: 147 KSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKM 206
+ + S +++ + + F ++
Sbjct: 268 SASKGGNTNKGGTQGSGAALGSGDGGKVGDQYAGVIKKEIQRRFLKDPSFAGK---VCRI 324
Query: 207 HFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSP--STYKSWRNITL 264
QL + G +LG + G + + A AV +++ +P Y+ +++ +
Sbjct: 325 KIQLGRDGAILGYQKI--SGPDD-----ICSAALSAVARTKKVPAAPSDEIYEKYKSPII 377
Query: 265 FFV 267
F
Sbjct: 378 DFD 380
>gi|223042125|ref|ZP_03612296.1| TonB2 energy transducing protein [Actinobacillus minor 202]
gi|223017064|gb|EEF15505.1| TonB2 energy transducing protein [Actinobacillus minor 202]
Length = 309
Score = 45.3 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 23/269 (8%), Positives = 68/269 (25%), Gaps = 43/269 (15%)
Query: 4 ENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDN-----IYNEDYHSSKYKKIE 58
GL S+ +H + ++ PI +E+ S+ + + + +
Sbjct: 7 RIGLVGSIAIHGAIVGSVWAAMTQLPQEPIIEQEVTSISMEMLAGVEQQAQVAVTPEDTP 66
Query: 59 EPVVQFKGSSQENLVRDFSVQENGDRFSDQTKT--------------------------- 91
+ + + + + + +
Sbjct: 67 VQPEVEEKETPSAVEEPKEEPKVEPQKPLKVEPIAEKPKEKKEKPKEKKPEPPKEKPKKI 126
Query: 92 ----HATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKK 147
+ E + K + ++ + ++ A Q I
Sbjct: 127 EKNIEKPKVEKPKLIEKPKPVLEKPAKPIKALEKGIEAKEGIVAKAAPNLPQAIKAQPGI 186
Query: 148 SIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAI----VRNRVIANWNIPSDFKRF---K 200
+ + + + + ++ K S + I ++ + N + K
Sbjct: 187 AQGSPAGKGNVGSSVGSDNGNAPKSTASGNEINAYKVTLQRALQRRANNTYPAREKMMRK 246
Query: 201 KLRVKMHFQLNQKGFVLGKINVDVVGGTE 229
V + F ++ G V ++ G +
Sbjct: 247 TGTVTLSFSVSPSGQVTNVQVINSSGNSN 275
>gi|197121312|ref|YP_002133263.1| TonB family protein [Anaeromyxobacter sp. K]
gi|196171161|gb|ACG72134.1| TonB family protein [Anaeromyxobacter sp. K]
Length = 202
Score = 45.3 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 11/73 (15%), Positives = 24/73 (32%), Gaps = 5/73 (6%)
Query: 181 IVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENAR 240
++ ++ + P+ V++ F + G V V G +L A
Sbjct: 120 QLQRQIERDPYPPAAELMGWSGTVRVGFTVLTDGSVADLRVVVSSGHG-----VLDRAAL 174
Query: 241 KAVIKSQAFRLSP 253
+ K+ + P
Sbjct: 175 AVIRKAAPYPRPP 187
>gi|311279122|ref|YP_003941353.1| Tol-Pal system TolA [Enterobacter cloacae SCF1]
gi|308748317|gb|ADO48069.1| Tol-Pal system TolA [Enterobacter cloacae SCF1]
Length = 167
Score = 45.3 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 28/125 (22%), Positives = 45/125 (36%), Gaps = 14/125 (11%)
Query: 147 KSIDTVVVRPDKKELLSKVEKSSRK-RIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVK 205
D P++ K ++ A VR+ + ++ D KR++
Sbjct: 54 SRDDVKAAAPERGPYAGKTSHTAPVITPAVSSYAAAVRDEITKHFF---DVKRYRGKVCS 110
Query: 206 MHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPS--TYKSWRNIT 263
+ + + G V V+ GG V E A AV S P TYK ++N+
Sbjct: 111 LRLSMERNGTVNS---VNTTGGDPKV----CEAAVNAVKLST-LPPVPDEQTYKVFKNVA 162
Query: 264 LFFVP 268
L F P
Sbjct: 163 LDFTP 167
>gi|85715807|ref|ZP_01046786.1| TonB like protein [Nitrobacter sp. Nb-311A]
gi|85697460|gb|EAQ35339.1| TonB like protein [Nitrobacter sp. Nb-311A]
Length = 264
Score = 45.3 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 24/231 (10%), Positives = 62/231 (26%), Gaps = 23/231 (9%)
Query: 10 SMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQ 69
++ +H+ + L + + + + + +
Sbjct: 22 ALAIHLGCVALAVAQMQTDESDDDLGAPAIEIGLDLSSPHREATDLPPGPDT--DASVAS 79
Query: 70 ENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKIS 129
L +V++ D D + + SK D +K +
Sbjct: 80 PALAEQKAVEKETDLPKDTPTETDEPDRIVTENESKKPV-------------DDDPEKAA 126
Query: 130 KATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIAN 189
K T Q+ S+++ + + + R + + +
Sbjct: 127 KPTTASQESAASEATAMPSVESAQESER--SVAPQQGTGASARRILATWQKELVAHLDKH 184
Query: 190 WNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENAR 240
P + + K + + ++F L++ G V+ V G + A
Sbjct: 185 KRYPPEHIQ-KNVEILVNFVLDRLGHVVSATIVKGSGD-----PVFDNAAL 229
>gi|316934719|ref|YP_004109701.1| TonB family protein [Rhodopseudomonas palustris DX-1]
gi|315602433|gb|ADU44968.1| TonB family protein [Rhodopseudomonas palustris DX-1]
Length = 283
Score = 45.3 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 25/228 (10%), Positives = 48/228 (21%), Gaps = 7/228 (3%)
Query: 28 QLLVPISRREMLSVDNIYNEDYHSSKYKKIEE-PVVQFKGSSQENLVRDFSVQENGDRFS 86
Q P + VD + P +Q + Q +
Sbjct: 42 QTPPPGEPLAAIMVDMAPVTASPQQSQLDVAPGPEMQEAEAPQPEPEPEPEQHATAAPEI 101
Query: 87 DQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEK 146
T+ + + A K + P + + L
Sbjct: 102 APTRLQPAPDVPLPPEAKPAPPAEKPEPVKVEQQQPVKPKPDRPKRERVAKLHSSERPPA 161
Query: 147 KSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFK-KLRVK 205
+ +R + + PS+ + +
Sbjct: 162 PRTSAPQRADRRANDAMAALAGARAASVLPTYRQRLAAHLQRFKRYPSEARATGVQGTAT 221
Query: 206 MHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSP 253
+ F + + G VLG G L V ++Q P
Sbjct: 222 LSFTVGRGGQVLGARLAHSSG-----HPALDAETLSMVQRAQPLPPFP 264
>gi|149918147|ref|ZP_01906640.1| putative periplasmic protein TonB [Plesiocystis pacifica SIR-1]
gi|149821152|gb|EDM80558.1| putative periplasmic protein TonB [Plesiocystis pacifica SIR-1]
Length = 807
Score = 45.3 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 16/237 (6%), Positives = 51/237 (21%), Gaps = 22/237 (9%)
Query: 35 RREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHAT 94
+ + + + + + + + +
Sbjct: 212 EAPKVRPEEVDARPEQNDPNPESLLATRELEPREHAEAMVEQEELAIEAEDGVVATAQER 271
Query: 95 ENETKRSSSSKGEQALKESALLRMPVSPYDK----QKISKATNKEQDLQGIS---FAEKK 147
+ + ++ D + + +L + +
Sbjct: 272 SSTVLEQDQQARITSRDPRYRFKLSHEEMDAVFGHDHNAPRNTESLELSKRKGVWDSARD 331
Query: 148 SIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFK---------- 197
+ + + + + ++ P IA + + W
Sbjct: 332 AYQSPLENMVPEVQAGNQTALNSRKHPFARYIAAMHRGIHEAWAFGYLDSLDSHPASHPL 391
Query: 198 RFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPS 254
L K+ LN G + + G + AR+ V+ + + P
Sbjct: 392 NDMNLWTKVEIVLNGDGTIHKVRTIHHSGNSS-----FDAAAREVVLATGPYPNPPK 443
>gi|322375945|ref|ZP_08050456.1| putative endo-beta-N-acetylglucosaminidase [Streptococcus sp. C300]
gi|321279213|gb|EFX56255.1| putative endo-beta-N-acetylglucosaminidase [Streptococcus sp. C300]
Length = 1574
Score = 45.3 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 17/177 (9%), Positives = 34/177 (19%), Gaps = 10/177 (5%)
Query: 29 LLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQ 88
PIS D + ++ E Q + V E
Sbjct: 79 AEQPISENTPAIADLVNEKEEAKPAPADKAEKHAQPTEKGEVKPEEAPQVAEKKADKPTL 138
Query: 89 TKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKS 148
E ++ R K + N+ +
Sbjct: 139 ADVPKNEEKSLRPKEIKFDTWEDLLKWEPGAREDDP-------INRSSVELAKRHRGQLV 191
Query: 149 IDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVK 205
+ R + L + K+ + + W ++ L
Sbjct: 192 NEKASRRAKVQALANTNSKAKDHASVGGEE---FKAYAFDYWQYLDSMVFWEGLVPT 245
>gi|300310550|ref|YP_003774642.1| TolA-related transport transmembrane protein [Herbaspirillum
seropedicae SmR1]
gi|300073335|gb|ADJ62734.1| TolA-related transport transmembrane protein [Herbaspirillum
seropedicae SmR1]
Length = 318
Score = 45.3 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 16/109 (14%), Positives = 34/109 (31%), Gaps = 6/109 (5%)
Query: 142 SFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKK 201
++ + ++ + + + S+ S + +R ++ +N +
Sbjct: 196 EARRQEDLKRMMGQATSATGGTGTAEKSQGPKGSPNYANKLRAKIRSNTVFDNSGV-SGN 254
Query: 202 LRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFR 250
+ +L G V G E R AV+KSQ F
Sbjct: 255 PAGEYTVELFPDGTVRSVRVNKPSG-----VPGFDEAVRTAVMKSQPFP 298
>gi|326575772|gb|EGE25695.1| hypothetical protein E9W_02350 [Moraxella catarrhalis CO72]
Length = 264
Score = 45.3 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 30/243 (12%), Positives = 61/243 (25%), Gaps = 31/243 (12%)
Query: 7 LAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKG 66
+ S++LH + ++ + P + + V +
Sbjct: 21 ILASVLLHTVIIIAVAAPLITPPTKPNTTIQTALV-------------------GQEAFN 61
Query: 67 SSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQ 126
+ L + Q + + A +N ++ + ++
Sbjct: 62 RVKTALSNHHADQNKPTATNTSSTITANDNAFIQAQNQHRYHPQVSTSATTTQAYHPPPN 121
Query: 127 KISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRV 186
S + S +S+ R AI V++R+
Sbjct: 122 --SAPFESNSPNIQNQPTNAHAKLAEYSNHVSDLEQSNHTESTPSRAQINAAITSVKHRI 179
Query: 187 IANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKS 246
A W + +NQ+G V GG R E+ AV +
Sbjct: 180 EAIWQRYPKQP---NQTITFQVNMNQQGDVTSIQF----GGGHPDLR---ESVEAAVYAA 229
Query: 247 QAF 249
F
Sbjct: 230 APF 232
>gi|146338153|ref|YP_001203201.1| hypothetical protein BRADO1050 [Bradyrhizobium sp. ORS278]
gi|146190959|emb|CAL74964.1| hypothetical protein; putative signal peptide [Bradyrhizobium sp.
ORS278]
Length = 143
Score = 45.3 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 17/107 (15%), Positives = 39/107 (36%), Gaps = 9/107 (8%)
Query: 166 EKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVV 225
S+ P I + ++ A+ + P + ++ F +++ G ++ ++
Sbjct: 16 AGSALAESPKDSWIKSLAVQLKAHRHYPLESSGTGG-TARVIFHIDRSGQLISAALLEST 74
Query: 226 GGTELVRRMLRENARKAVIKSQAFRLSPSTYKSWR---NITLFFVPS 269
G R L + A + ++Q F P ++ L F P
Sbjct: 75 GD-----RALDKEALTMIERAQPFPAPPPDMSDDHLTLSVPLVFAPR 116
>gi|152991164|ref|YP_001356886.1| periplasmic protein TonB [Nitratiruptor sp. SB155-2]
gi|151423025|dbj|BAF70529.1| periplasmic protein TonB [Nitratiruptor sp. SB155-2]
Length = 267
Score = 45.3 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 29/237 (12%), Positives = 69/237 (29%), Gaps = 14/237 (5%)
Query: 27 VQLLVPISRREMLSVDNIYNEDYHSSKYK-------KIEEPVVQFKGSSQENLVRDFSVQ 79
+ + + +++SV + K + ++ K ++ + + +
Sbjct: 23 FDTFLEVPKNKIVSVTKLQIIHPPKPAPKCQCAMMKAKLQKQIEKKKQPKKRVEKKEQPK 82
Query: 80 ENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQ 139
+ + + K + ++A P K N E Q
Sbjct: 83 KRIIKKKRKKKPIRRIVKKPVKKRKVKKRASVTKKRRVKKKQPTKTVLERKQPNSEVVQQ 142
Query: 140 GISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKR- 198
+ + + K K S + ++ +R ++ P +R
Sbjct: 143 KSLKEKVVEKPKITRQVKKGTEKETPTKPSYHQRYIDQYLSKIRQIILEYRYYPRIARRT 202
Query: 199 FKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQA-FRLSPS 254
K+ VK+ +L G V + G + +L A + V K+ + F
Sbjct: 203 RKEGLVKVSLKLLPDGSVKELHIIQSSGHS-----ILDRAALQTVQKASSHFPKPAQ 254
>gi|229520297|ref|ZP_04409723.1| TolA protein [Vibrio cholerae TM 11079-80]
gi|229342663|gb|EEO07655.1| TolA protein [Vibrio cholerae TM 11079-80]
Length = 356
Score = 44.9 bits (104), Expect = 0.011, Method: Composition-based stats.
Identities = 20/183 (10%), Positives = 63/183 (34%), Gaps = 2/183 (1%)
Query: 5 NGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNI--YNEDYHSSKYKKIEEPVV 62
+ IS+ +H + +L + + + P +M+ I + + + E
Sbjct: 13 KSITISLAMHGALVAILLWGADFTMSDPEPTGQMIEAVVIDPQLVRQQAQQIRSQREEAA 72
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
+ + + L R+ E + ++ E + K + +++ + L+E +
Sbjct: 73 KKEQERLDKLRRESEQLEKNRQAEEERIRQLKEQQAKEAKAAREAEKLREQKEQERLAAE 132
Query: 123 YDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIV 182
++ + K + + + K + V + ++ ++ R++
Sbjct: 133 QKAREEKERAAKAEAERKVKEEAAKKAEQERVAKEAAAAKAEQQRIEREKEAKLAEEKAK 192
Query: 183 RNR 185
R +
Sbjct: 193 REK 195
Score = 41.4 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 29/226 (12%), Positives = 75/226 (33%), Gaps = 10/226 (4%)
Query: 47 EDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKG 106
E ++K + + + +++ V + ++ + + A E K +
Sbjct: 138 EKERAAKAEAERKVKEEAAKKAEQERVAKEAAAAKAEQQRIEREKEAKLAEEKAKREKEV 197
Query: 107 EQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVE 166
++ L + + K K + + A++ +++ + ++ +
Sbjct: 198 AAKAEQERLAKEKAAKEAADKAKKEKERAAKAEAERKAQEAALNDIFGSLSEESQQNNAA 257
Query: 167 KSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVG 226
+ AI + N + F+ + +++ +L G ++ V+
Sbjct: 258 RQQFVTSEVGRYGAIYTQLIRQNLLVEDSFRGKQ---CRVNLKLIPTGTGALLGSLTVLD 314
Query: 227 GTELVRRMLRENARKAVIKSQAFRLS---PSTYKSWRNITLFFVPS 269
G L ++AV + +F L P + RNI L P
Sbjct: 315 GDSR----LCAATKRAVAQVNSFPLPKDQPDVVEKLRNINLTVAPE 356
>gi|222086538|ref|YP_002545072.1| outer membrane protein [Agrobacterium radiobacter K84]
gi|221723986|gb|ACM27142.1| outer membrane protein [Agrobacterium radiobacter K84]
Length = 481
Score = 44.9 bits (104), Expect = 0.011, Method: Composition-based stats.
Identities = 16/175 (9%), Positives = 59/175 (33%), Gaps = 4/175 (2%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNI---YNEDYHSSKYKKIE 58
++ G +S++LHV + + + + E ++V+ + + +++K K+
Sbjct: 11 KIGRGFVLSILLHVALAAIFLLR-PLMMPPQAAPEENVNVELVPQPQEQQENATKPKEAS 69
Query: 59 EPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRM 118
V E + + ++ + D +++ + ++ +
Sbjct: 70 GQVPTPTPKPNEKSQQADAQKQPEQKSGDPKTQSDQQDKAEAEKAAPPASNPSSNTPTPK 129
Query: 119 PVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRI 173
P ++ K ++ + + + P + ++ + +S +
Sbjct: 130 PEQQASTEETPLPDMKGEEKDPSTTQQADASAQSDEAPAANDGQAEEQAASPAKD 184
>gi|325294660|ref|YP_004281174.1| TonB family protein [Desulfurobacterium thermolithotrophum DSM
11699]
gi|325065108|gb|ADY73115.1| TonB family protein [Desulfurobacterium thermolithotrophum DSM
11699]
Length = 498
Score = 44.9 bits (104), Expect = 0.011, Method: Composition-based stats.
Identities = 22/157 (14%), Positives = 45/157 (28%), Gaps = 6/157 (3%)
Query: 99 KRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDK 158
+ + + + M + D + +++D E S +
Sbjct: 326 EIQQKVQPYTLQDTTEEIVMEENFADNYEKEAGNEEDKDKIINPLNETVSDNYNSGNNGS 385
Query: 159 KELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFK-KLRVKMHFQLNQKGFVL 217
+ + +EK IV + + N P KR + + V + + + G +
Sbjct: 386 NDSHNGIEKEVGIDSVIDKYRLIVISEIKRNRYYPIIAKRMEIEGTVTLGLTIEKNGKLK 445
Query: 218 GKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPS 254
V G ++L A K K P
Sbjct: 446 KVSIVSSSGS-----KILDRAAIKTAKKCNFPPFPPE 477
>gi|229592296|ref|YP_002874415.1| TolA colicin import membrane protein [Pseudomonas fluorescens
SBW25]
gi|229364162|emb|CAY51811.1| TolA colicin import membrane protein [Pseudomonas fluorescens
SBW25]
Length = 357
Score = 44.9 bits (104), Expect = 0.011, Method: Composition-based stats.
Identities = 20/139 (14%), Positives = 37/139 (26%), Gaps = 11/139 (7%)
Query: 137 DLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDF 196
AE+K + + + + ++R R W P
Sbjct: 224 QEAARKSAEEKKAQALADLLSDTPQRQQALADEQGDDVAGSFDDLIRARAAEGWTRPPSA 283
Query: 197 KRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFR----LS 252
+ K + V + + G V G A AV +
Sbjct: 284 R--KGMTVVLQIGMLPDGTVTSVSVAKSSGDGSFDSS-----AVAAVKNIGRLTEMQGMK 336
Query: 253 PSTYKSWRNITLFFVPSKM 271
PS + +R+ + F P +
Sbjct: 337 PSDFAPYRSFKMTFTPEDL 355
>gi|46201416|ref|ZP_00208093.1| COG0810: Periplasmic protein TonB, links inner and outer membranes
[Magnetospirillum magnetotacticum MS-1]
Length = 244
Score = 44.9 bits (104), Expect = 0.011, Method: Composition-based stats.
Identities = 18/186 (9%), Positives = 49/186 (26%), Gaps = 7/186 (3%)
Query: 70 ENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKIS 129
+ + ++ + + ++ E K
Sbjct: 46 KAVPAPPEEFPASMVVEIASEAPRPQESPHAAPRAEPEAQPPAPTPKPAAARVRTKPATP 105
Query: 130 KATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIAN 189
+ + + + + I + + + +
Sbjct: 106 PPAAPGGPAVSAAPFPQGETAPAMEAAAPPISAPPPKTAEASSISYGVYAGRLHDLIARH 165
Query: 190 WNIPS-DFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQA 248
P +R ++ V++ + Q G +L +N+ V L + AR+AV ++
Sbjct: 166 RVYPPQSLRRREEGDVRLRILMGQDGRLLDIVNLAVAS------VHLTQAARQAVEQAAP 219
Query: 249 FRLSPS 254
F P+
Sbjct: 220 FDPPPT 225
>gi|192290804|ref|YP_001991409.1| TonB family protein [Rhodopseudomonas palustris TIE-1]
gi|192284553|gb|ACF00934.1| TonB family protein [Rhodopseudomonas palustris TIE-1]
Length = 285
Score = 44.9 bits (104), Expect = 0.011, Method: Composition-based stats.
Identities = 19/230 (8%), Positives = 50/230 (21%), Gaps = 9/230 (3%)
Query: 28 QLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSD 87
Q+ P + +D + + + + +
Sbjct: 42 QVPPPGEPLAAIMIDLAPMTASPQPSPLDLPPGPEMQEAEAPQAEPEPVQHTAAAPEIAP 101
Query: 88 QTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNK---EQDLQGISFA 144
A E + + E L K + K + +
Sbjct: 102 TPIQQAAEVPLPPDAKPSPTPDMPEPVKLEQAEPVKPKPERPKPIKRERVAKQNPSDRPP 161
Query: 145 EKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFK-KLR 203
++ + ++ + + + + P++ + +
Sbjct: 162 APRTSAPQRAERRAADAMAALAGAQAAAAMLPSYRQRLAAHLQRFKRYPTEARASGVQGT 221
Query: 204 VKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSP 253
+ F + + G VL G L V ++Q P
Sbjct: 222 ATLSFTVGRGGQVLSARLARSSG-----HPALDAETLAMVSRAQPLPPFP 266
>gi|330994514|ref|ZP_08318438.1| Filamentous hemagglutinin [Gluconacetobacter sp. SXCC-1]
gi|329758368|gb|EGG74888.1| Filamentous hemagglutinin [Gluconacetobacter sp. SXCC-1]
Length = 242
Score = 44.9 bits (104), Expect = 0.011, Method: Composition-based stats.
Identities = 14/141 (9%), Positives = 37/141 (26%), Gaps = 6/141 (4%)
Query: 115 LLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIP 174
+ + + + D + A + + S+R
Sbjct: 87 EEKRRLPARKPRPVPHLKKPVPDRTPPADATTAPPSVQAPPAPVQAAPAPGASSARAAHD 146
Query: 175 SQDAIAIVRNRVIANWNIPSDFKRF-KKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRR 233
+ ++ P ++ + F ++++G V+ G +
Sbjct: 147 PLTWQGALLAQLEKFKRYPPAAMGARQEGVPTVRFSMDRRGHVISVELASSSGHS----- 201
Query: 234 MLRENARKAVIKSQAFRLSPS 254
ML + A ++Q P
Sbjct: 202 MLDQEAVALPRRAQPLPAPPD 222
>gi|146162847|ref|XP_001470738.1| ku P70 DNA helicase [Tetrahymena thermophila]
gi|146146270|gb|EDK31925.1| ku P70 DNA helicase [Tetrahymena thermophila SB210]
Length = 711
Score = 44.9 bits (104), Expect = 0.011, Method: Composition-based stats.
Identities = 10/175 (5%), Positives = 43/175 (24%), Gaps = 5/175 (2%)
Query: 40 SVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETK 99
D I ++ + + I + + ++ + + Q+ + + + +
Sbjct: 507 PADLIQPDEEGMKRCEDIIKLFEEALKLDVQDDDQPQAAQKKPRQKKVAVEKQPAAQKKQ 566
Query: 100 RSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKK 159
+ ++ + I +++ + K V +
Sbjct: 567 PAPKK-----PAQNKKQVKKEEESEASSIGDYDSEDSFIDNEEDEIKPKKRGVQNKKVTN 621
Query: 160 ELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKG 214
+ + + + + + K + + + N G
Sbjct: 622 QRKVNKKVEYSDEDDEISYEEKPKRKAAGKKQMSEEEKLISHVEANLKEEFNPDG 676
>gi|329115464|ref|ZP_08244213.1| NB Family Protein [Acetobacter pomorum DM001]
gi|326695242|gb|EGE46934.1| NB Family Protein [Acetobacter pomorum DM001]
Length = 275
Score = 44.9 bits (104), Expect = 0.011, Method: Composition-based stats.
Identities = 22/204 (10%), Positives = 51/204 (25%), Gaps = 17/204 (8%)
Query: 52 SKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALK 111
+ + P + SV D + + + +
Sbjct: 66 MAPEPVAIPSPPTYTPPTPHQTISESVPSPVDPAKLEAPPAPAPQLPLPVPKPEKLRKII 125
Query: 112 ESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRK 171
+ + + + K A L + ++ SS
Sbjct: 126 KKHKSTVSLKKPNPDKTLPAEKTTAPLSSKVSPNQTQAASI-----------DGSSSSHV 174
Query: 172 RIPSQDAIAIVRNRVIANWNIPSDFKRFKK-LRVKMHFQLNQKGFVLGKINVDVVGGTEL 230
+ R+ P++ + ++HF +++KG VL G +
Sbjct: 175 SQSPATWQGSLLARLEKYKRYPAEAMSAHQEGAPRLHFTMDRKGHVLSAHIEKSSGHS-- 232
Query: 231 VRRMLRENARKAVIKSQAFRLSPS 254
+L A V +++ P
Sbjct: 233 ---LLDSEALALVHRAEPLPSPPE 253
>gi|218674805|ref|ZP_03524474.1| hypothetical protein RetlG_26850 [Rhizobium etli GR56]
Length = 367
Score = 44.9 bits (104), Expect = 0.011, Method: Composition-based stats.
Identities = 19/154 (12%), Positives = 41/154 (26%), Gaps = 4/154 (2%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
G+ S++LHV + LL F P E + V+ + + + KK EE + K
Sbjct: 40 GVGASVLLHVPLIALLIFGLPKIEPKP-PEDESVKVELVPPPEEKKPEEKKPEEKPPEPK 98
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSK---GEQALKESALLRMPVSP 122
Q ++ + ++ ++
Sbjct: 99 PPEQAKKQPPPPPPPPPPPAKKASEQAKPRPMPTLNPVTEFGGKNSGPEKFLAGNSSEGE 158
Query: 123 YDKQKISKATNKEQDLQGISFAEKKSIDTVVVRP 156
S ++ + A ++
Sbjct: 159 RKPATTSAQRDRPLEQVPAKAAAEEPKTEAPASK 192
>gi|153827558|ref|ZP_01980225.1| tolA protein [Vibrio cholerae MZO-2]
gi|149738471|gb|EDM52867.1| tolA protein [Vibrio cholerae MZO-2]
Length = 356
Score = 44.9 bits (104), Expect = 0.011, Method: Composition-based stats.
Identities = 20/183 (10%), Positives = 64/183 (34%), Gaps = 2/183 (1%)
Query: 5 NGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNI--YNEDYHSSKYKKIEEPVV 62
+ IS+++H + +L + + + P +M+ I + + + E
Sbjct: 13 KSITISLVMHGALVAILLWGADFTMSDPEPTGQMIEAVVIDPQLVRQQAQQIRSQREEAA 72
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
+ + + L R+ E + ++ E + K + +++ + L+E +
Sbjct: 73 KKEQERLDKLRRESEQLEKNRQAEEERIRQLKEQQAKEAKAAREAEKLREQKEQERLAAE 132
Query: 123 YDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIV 182
++ + K + + + K + V + ++ ++ R++
Sbjct: 133 QKAREEKERAAKAEAERKVKEEAAKKAEQERVAKEAAAAKAEQQRIEREKEAKLAEEKAK 192
Query: 183 RNR 185
R +
Sbjct: 193 REK 195
Score = 41.4 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 28/226 (12%), Positives = 75/226 (33%), Gaps = 10/226 (4%)
Query: 47 EDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKG 106
E ++K + + + +++ V + ++ + + A E K +
Sbjct: 138 EKERAAKAEAERKVKEEAAKKAEQERVAKEAAAAKAEQQRIEREKEAKLAEEKAKREKEV 197
Query: 107 EQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVE 166
++ L + + K K + + A++ +++ + ++ +
Sbjct: 198 AAKAEQERLAKEKAAKEAADKAKKEKERAAKAEAERKAQEAALNDIFGSLSEESQQNNAA 257
Query: 167 KSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVG 226
+ AI + N + F+ + +++ +L G ++ V+
Sbjct: 258 RQQFVTSEVGRYGAIYTQLIRQNLLVEDSFRGKQ---CRVNLKLIPTGTGALLGSLTVLD 314
Query: 227 GTELVRRMLRENARKAVIKSQAFRLS---PSTYKSWRNITLFFVPS 269
G L ++AV + +F L P + +NI L P
Sbjct: 315 GDSR----LCAATKRAVAQVNSFPLPKDQPDVVEKLKNINLTVAPE 356
>gi|256045281|ref|ZP_05448175.1| TonB-dependent receptor [Brucella melitensis bv. 1 str. Rev.1]
gi|265991709|ref|ZP_06104266.1| TonB [Brucella melitensis bv. 1 str. Rev.1]
gi|263002665|gb|EEZ15068.1| TonB [Brucella melitensis bv. 1 str. Rev.1]
Length = 283
Score = 44.9 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 20/210 (9%), Positives = 55/210 (26%), Gaps = 13/210 (6%)
Query: 34 SRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHA 93
+ + V+ + + + + E +E + + Q
Sbjct: 60 TEVAAMVVELVPDLVAPAEERVSEEVQPETTTEQPEEVQPEPEPEPQPEAKAEPQQVQEP 119
Query: 94 TENETK--RSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDT 151
E + + + ++ + ++ + E +
Sbjct: 120 EEVIPDVVEAQKPEP----------KKVEKLKPQKPKPEKVKPKKAEKAAETREASAPRV 169
Query: 152 VVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLN 211
K + E S+ + + +++ + N R + + F ++
Sbjct: 170 DADNGAKVAASKRGETSASAGVIWAKWTSRLQSHMARNARFLQGKSRNTRGEAHVAFVID 229
Query: 212 QKGFVLGKINVDVVGGTELVRRMLRENARK 241
G VL G + + L E AR+
Sbjct: 230 PSGNVLSARIAVSSGDPAVDQLAL-EAARR 258
>gi|189425822|ref|YP_001952999.1| TonB family protein [Geobacter lovleyi SZ]
gi|189422081|gb|ACD96479.1| TonB family protein [Geobacter lovleyi SZ]
Length = 249
Score = 44.9 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 26/241 (10%), Positives = 65/241 (26%), Gaps = 32/241 (13%)
Query: 7 LAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKG 66
L++S++LH +F + + P ++ + P
Sbjct: 17 LSVSLLLHGLFFVAAIVLLPPLVQAPPKEPALVMTHLVSL-------------PTPNAGK 63
Query: 67 SSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQ 126
+ + + Q + ++ + SS E A P + Q
Sbjct: 64 ETTSPAPALPVINRPTPKSQPQPQPPPPKSVAPTTFSSNPPLKPSEPAPQAPPAPTFSAQ 123
Query: 127 KISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRV 186
+ + + + + ++ + +R A+ + R
Sbjct: 124 QTKAGVASKPETGSQPAVQTSTTTGGNRIAPQEMAFGSASGPAFRRQAVPVYPALAKRR- 182
Query: 187 IANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKS 246
K+ V + +++ G + ++ G E A++AV S
Sbjct: 183 ------------NKEGVVLLRLSISETGQLTQLEVLEDPGYG------FGEAAQEAVRNS 224
Query: 247 Q 247
Sbjct: 225 S 225
>gi|319760469|ref|YP_004124407.1| tolA domain protein [Candidatus Blochmannia vafer str. BVAF]
gi|318039183|gb|ADV33733.1| tolA domain protein [Candidatus Blochmannia vafer str. BVAF]
Length = 390
Score = 44.9 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 25/203 (12%), Positives = 64/203 (31%), Gaps = 13/203 (6%)
Query: 68 SQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQK 127
L + S Q + + ++ + A+ + + ++ +A + P
Sbjct: 199 PTPALKKQRSEQSDRFKITNTSSNIASSEKQSLHPTPALKKQRSTTAKKLLAHPPLHNTN 258
Query: 128 ISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVI 187
I + + + ++ + + + + K + ++ +
Sbjct: 259 IHSSDSNKLEILLNNILISNDKYIQNNKNFQSLFIKKNNAVEIRNNEINLYKNLIIQSIQ 318
Query: 188 ANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQ 247
+ + + + + QL+ G V+ + ML + A AV +
Sbjct: 319 QKF---YNVTDYSGKKCDLKIQLDPNGKVISVT-------SISGDWMLSKAATIAVQLAN 368
Query: 248 AFRLSPS--TYKSWRNITLFFVP 268
F P+ Y ++NI L F P
Sbjct: 369 -FPKPPNVYVYNVFKNIILSFTP 390
>gi|326571033|gb|EGE21057.1| hypothetical protein E9S_04862 [Moraxella catarrhalis BC7]
Length = 264
Score = 44.9 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 29/243 (11%), Positives = 68/243 (27%), Gaps = 31/243 (12%)
Query: 7 LAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKG 66
+ S++LH + ++ + P + + + ++ V
Sbjct: 21 ILASVLLHTVIIIAVAAPLITPPTKPNTTIQ------------TALVGQEAFNRVKTALS 68
Query: 67 SSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQ 126
+ N + + + ++ +N+ + ++ +P++
Sbjct: 69 NHHANQNKPTATNTSSTITANDNAFMQAQNQHRYHPQVSTSATTTQAYHPPPNSAPFESN 128
Query: 127 KISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRV 186
+ ++ D S +S+ R AI V++R+
Sbjct: 129 SPNIQNQPTNAHAKLAEYSNHVSDL---------EQSNHTESTPSRAQINAAITSVKHRI 179
Query: 187 IANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKS 246
A W + +NQ+G V GG R E+ AV +
Sbjct: 180 EAIWQHYPKQP---NQTITFQVNMNQQGDVTSIQF----GGGHPDLR---ESVEAAVYAA 229
Query: 247 QAF 249
F
Sbjct: 230 APF 232
>gi|153007096|ref|YP_001381421.1| TonB family protein [Anaeromyxobacter sp. Fw109-5]
gi|152030669|gb|ABS28437.1| TonB family protein [Anaeromyxobacter sp. Fw109-5]
Length = 241
Score = 44.9 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 29/245 (11%), Positives = 59/245 (24%), Gaps = 34/245 (13%)
Query: 10 SMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQ 69
++ +H + + + P S R + VD + + + + V
Sbjct: 18 AVAVHALVVWVTL--------RPASPRPPVPVDVLLVRPAATRELLQPPAAVSSRAQRPA 69
Query: 70 ENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKIS 129
+ + R + + P+ D +
Sbjct: 70 GPVPSALRSPADPRRLIPPSAP---------------------VSATAPPLEAADPADLP 108
Query: 130 KATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIAN 189
T + G + + V+ S + ++ + ++ R
Sbjct: 109 PLTAGDVAFSGAGGDPYSRFPRGGGGREGGIAPAGVQASEWLVLHQREIVRRIQERASRR 168
Query: 190 WNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAF 249
V++ F L G V V G R+ L E A V S F
Sbjct: 169 PYPALAAAMGWTGVVRVAFTLRTDGTVADLRVVKTSG-----RKALDECALDDVRASVPF 223
Query: 250 RLSPS 254
Sbjct: 224 PRPSE 228
>gi|296162181|ref|ZP_06844977.1| protein TolA [Burkholderia sp. Ch1-1]
gi|295887567|gb|EFG67389.1| protein TolA [Burkholderia sp. Ch1-1]
Length = 344
Score = 44.9 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 12/73 (16%), Positives = 21/73 (28%), Gaps = 8/73 (10%)
Query: 178 AIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRE 237
VR V N + L + + + G +LG G +
Sbjct: 261 YSDKVRRAVRPN---ITWGGETSGLETVVSVRCSPTGTLLGATISRSSGN-----PAWDD 312
Query: 238 NARKAVIKSQAFR 250
A +AV ++
Sbjct: 313 AALRAVQRTDPMP 325
>gi|258626843|ref|ZP_05721650.1| tolA protein [Vibrio mimicus VM603]
gi|258580890|gb|EEW05832.1| tolA protein [Vibrio mimicus VM603]
Length = 356
Score = 44.9 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 19/183 (10%), Positives = 63/183 (34%), Gaps = 2/183 (1%)
Query: 5 NGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNI--YNEDYHSSKYKKIEEPVV 62
+ +S+ +H + +L + + + P +M+ I + + + E
Sbjct: 13 KSITVSLAMHGALVAILLWGADFTMSDPEPTGQMIEAVVIDPQLVRQQAQQIRSQREEAA 72
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
+ + + L R+ E + ++ E + K + +++ + L+E +
Sbjct: 73 KKEQERLDKLRRESEQLEKNRQAEEERIRELKEQQAKEAKAAREAEKLREQKEQERLAAE 132
Query: 123 YDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIV 182
++ + K + + + K + V + ++ ++ R++
Sbjct: 133 QKAREEKERAAKAEAERKVKEEAAKKAEQERVAKEVAAAKAEQQRIEREKEAKLAEEKAK 192
Query: 183 RNR 185
R +
Sbjct: 193 REK 195
Score = 42.2 bits (97), Expect = 0.087, Method: Composition-based stats.
Identities = 29/226 (12%), Positives = 75/226 (33%), Gaps = 10/226 (4%)
Query: 47 EDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKG 106
E ++K + + + +++ V ++ + + A E K +
Sbjct: 138 EKERAAKAEAERKVKEEAAKKAEQERVAKEVAAAKAEQQRIEREKEAKLAEEKAKREKEI 197
Query: 107 EQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVE 166
++ L + + +K K K + A++ +++ + ++ +
Sbjct: 198 AAKAEQDRLAKEKAAKEAAEKAKKEKEKAAKAEADRKAQEAALNDIFGSLSEESQQNNSA 257
Query: 167 KSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVG 226
+ AI + N + F+ + +++ +L G ++ V+
Sbjct: 258 RQQFVTSEVGRYGAIYTQLIRQNLLVEDSFRGKQ---CRVNLKLIPTGTGALLGSLTVLD 314
Query: 227 GTELVRRMLRENARKAVIKSQAFRLS---PSTYKSWRNITLFFVPS 269
G L ++AV + +F L P + +NI L P
Sbjct: 315 GDSR----LCAATKRAVAQVNSFPLPKDQPDVVEKLKNINLTVAPE 356
>gi|229497073|ref|ZP_04390777.1| TonB family domain protein [Porphyromonas endodontalis ATCC 35406]
gi|229315998|gb|EEN81927.1| TonB family domain protein [Porphyromonas endodontalis ATCC 35406]
Length = 270
Score = 44.9 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 31/271 (11%), Positives = 71/271 (26%), Gaps = 19/271 (7%)
Query: 6 GLAISMILHVMFLLLLYFN-FNVQLLVPISRREMLSV-----DNIYNEDYHSSKYKKIE- 58
L I++ H + + LL+ + ++ V + +
Sbjct: 8 ALGITIAFHGLIVALLFLLQLSTMARSHPKEITLVPVGVLGEELARGGAGSEAAPAPSSY 67
Query: 59 EPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRM 118
P + + + ++ + + ++ E+ +E A
Sbjct: 68 TPSMPTAPPTAPSPHKESLLTQKTPDQPAVAPPKTKPTPKTNEAALAAERRAQEEARRAQ 127
Query: 119 PVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDA 178
++ IS + + K + E + +
Sbjct: 128 EAERERQRAISNKVSNAFGKSASQGTQGKESTGTGGAQGQGEGSATGSSVGGGASLAG-- 185
Query: 179 IAIVRNRVIANWNIPSDFKRFK--KLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLR 236
V+ N P+ F + V + +N G V+ + GT +
Sbjct: 186 -----RNVVGNGGRPARPTGFSPTRGTVVVRIVVNADGKVIEAT--QRLRGTNVTDSRTV 238
Query: 237 ENARKAVIKSQAFRLSPSTYKSWRNITLFFV 267
+ A +A + + F P IT F
Sbjct: 239 QAAIRAAL-ATRFNAQPGAADQEGTITYHFD 268
>gi|89075796|ref|ZP_01162184.1| hypothetical tolA protein [Photobacterium sp. SKA34]
gi|89048528|gb|EAR54103.1| hypothetical tolA protein [Photobacterium sp. SKA34]
Length = 356
Score = 44.9 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 17/167 (10%), Positives = 49/167 (29%), Gaps = 5/167 (2%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPI---SRREMLSVDNIYNEDYHSS--KYKKIEEP 60
IS+ +H + + LL + + + + + VD + ++ +
Sbjct: 9 STVISLFIHALLIGLLLWGADFTKKKADVGGNTIQAVVVDPAMIHQQATQIRDQREAAKR 68
Query: 61 VVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPV 120
Q E+ Q + + K + ++ ++ L +
Sbjct: 69 AEQESKKKLEDQAEAAEKQRKDEAERARQLKADQLKAEKEAREAEKQRKLVAEQQKQAAE 128
Query: 121 SPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEK 167
+ +K + + Q + ++ + K E S+ +
Sbjct: 129 EKRKADEAAKVEAERKAKQEAAEKAEQVRQQKLEEQRKAEEASRQAE 175
Score = 41.8 bits (96), Expect = 0.10, Method: Composition-based stats.
Identities = 40/228 (17%), Positives = 75/228 (32%), Gaps = 12/228 (5%)
Query: 44 IYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSS 103
+ E + + E V Q K Q E + K A E ++ +
Sbjct: 139 VEAERKAKQEAAEKAEQVRQQKLEEQRKAEEASRQAELERQKQVAAKKKAQEEAAAKAEA 198
Query: 104 SKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLS 163
+ E K+ A + + K+ ++A K + + + ++ +++ + + +
Sbjct: 199 KRKEAEAKKKAEAKRKAAEAKKKAEAEAKRKAAEAKKLDQQKEAALNDMFAGLEAENEQR 258
Query: 164 KVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVD 223
K AI + + N + FK + + +L+ G VL
Sbjct: 259 GGAKGQHIADEVARYGAIYKQMIQQNLLVDQSFKGQE---CNLTMRLSADGLVLDVTQSR 315
Query: 224 VVGGTELVRRMLRENARKAVIKSQAFRLS--PSTYKSWRNITLFFVPS 269
G L A+ AV+K F + P K RNI L P
Sbjct: 316 GDG-------ALCRAAKSAVVKVSQFPMPDDPEIAKKLRNIKLSVTPQ 356
>gi|196046803|ref|ZP_03114025.1| putative internalin [Bacillus cereus 03BB108]
gi|196022338|gb|EDX61023.1| putative internalin [Bacillus cereus 03BB108]
Length = 1098
Score = 44.9 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 9/133 (6%), Positives = 33/133 (24%), Gaps = 1/133 (0%)
Query: 47 EDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKG 106
+ K E + + + + + + +K E + S +
Sbjct: 863 SKEEPKEPAKEVEGSKEEPKEPAKEVEGSKEEPKEPAKEVEGSKEEPKEPAKEVEGSKEE 922
Query: 107 EQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVR-PDKKELLSKV 165
+ + +++ + ++ K+ + + KE + +
Sbjct: 923 VKEPAKEVEGPKEEVKEPTKEVEGPKEEVKEPTKEVEGPKEEVKEPMKEVEGSKEEVKEP 982
Query: 166 EKSSRKRIPSQDA 178
K +
Sbjct: 983 TKEAEGSKEEVKE 995
>gi|145632630|ref|ZP_01788364.1| cell envelope integrity inner membrane protein TolA [Haemophilus
influenzae 3655]
gi|148825335|ref|YP_001290088.1| cell envelope integrity inner membrane protein TolA [Haemophilus
influenzae PittEE]
gi|144986825|gb|EDJ93377.1| cell envelope integrity inner membrane protein TolA [Haemophilus
influenzae 3655]
gi|148715495|gb|ABQ97705.1| cell envelope integrity inner membrane protein TolA [Haemophilus
influenzae PittEE]
gi|309972458|gb|ADO95659.1| Outer membrane integrity protein TolA [Haemophilus influenzae
R2846]
Length = 392
Score = 44.9 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 13/123 (10%), Positives = 36/123 (29%), Gaps = 12/123 (9%)
Query: 147 KSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKM 206
+ + S +++ + + +F ++
Sbjct: 278 SASKGGNTNKGGTQGSGAALGSGDGGKVGDQYAGVIKKEIQRRFLKDPNFAGK---VCRI 334
Query: 207 HFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSP--STYKSWRNITL 264
QL + G +LG + + A AV +++ +P Y+ +++ +
Sbjct: 335 KIQLGRDGTILGYQKISGSDD-------ICSAALSAVARTKKVPAAPSDEIYEKYKSPII 387
Query: 265 FFV 267
F
Sbjct: 388 DFD 390
Score = 40.7 bits (93), Expect = 0.22, Method: Composition-based stats.
Identities = 16/99 (16%), Positives = 31/99 (31%), Gaps = 1/99 (1%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
AIS++LH + LL + + + E D I + + + Q K
Sbjct: 12 AFAISILLHFILFGLLILSSLYHTVEIMGGGEGEG-DVIGAVIVDTGTAAQEWGRIQQQK 70
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSS 104
+ R V E +Q + + ++
Sbjct: 71 KGQADKQKRPEPVVEEKPPEPNQEEIKHQQEVQRQEELK 109
>gi|15641839|ref|NP_231471.1| tolA protein [Vibrio cholerae O1 biovar El Tor str. N16961]
gi|121591678|ref|ZP_01678912.1| tolA protein [Vibrio cholerae 2740-80]
gi|121727652|ref|ZP_01680755.1| tolA protein [Vibrio cholerae V52]
gi|147673834|ref|YP_001217373.1| tolA protein [Vibrio cholerae O395]
gi|153214285|ref|ZP_01949302.1| tolA protein [Vibrio cholerae 1587]
gi|153800430|ref|ZP_01955016.1| tolA protein [Vibrio cholerae MZO-3]
gi|153828544|ref|ZP_01981211.1| tolA protein [Vibrio cholerae 623-39]
gi|227081966|ref|YP_002810517.1| tolA protein [Vibrio cholerae M66-2]
gi|229508066|ref|ZP_04397571.1| TolA protein [Vibrio cholerae BX 330286]
gi|229511695|ref|ZP_04401174.1| TolA protein [Vibrio cholerae B33]
gi|229515217|ref|ZP_04404677.1| TolA protein [Vibrio cholerae TMA 21]
gi|229518834|ref|ZP_04408277.1| TolA protein [Vibrio cholerae RC9]
gi|229523855|ref|ZP_04413260.1| TolA protein [Vibrio cholerae bv. albensis VL426]
gi|229607627|ref|YP_002878275.1| TolA protein [Vibrio cholerae MJ-1236]
gi|254292154|ref|ZP_04962925.1| tolA protein [Vibrio cholerae AM-19226]
gi|254848923|ref|ZP_05238273.1| tolA protein [Vibrio cholerae MO10]
gi|255745401|ref|ZP_05419350.1| TolA protein [Vibrio cholera CIRS 101]
gi|297579356|ref|ZP_06941284.1| tolA protein [Vibrio cholerae RC385]
gi|298498124|ref|ZP_07007931.1| TolA [Vibrio cholerae MAK 757]
gi|10441439|gb|AAG17041.1|AF187269_3 TolA [Vibrio cholerae O395]
gi|9656364|gb|AAF94985.1| tolA protein [Vibrio cholerae O1 biovar El Tor str. N16961]
gi|121546463|gb|EAX56687.1| tolA protein [Vibrio cholerae 2740-80]
gi|121630039|gb|EAX62446.1| tolA protein [Vibrio cholerae V52]
gi|124115433|gb|EAY34253.1| tolA protein [Vibrio cholerae 1587]
gi|124124056|gb|EAY42799.1| tolA protein [Vibrio cholerae MZO-3]
gi|146315717|gb|ABQ20256.1| tolA protein [Vibrio cholerae O395]
gi|148875939|gb|EDL74074.1| tolA protein [Vibrio cholerae 623-39]
gi|150421917|gb|EDN13893.1| tolA protein [Vibrio cholerae AM-19226]
gi|227009854|gb|ACP06066.1| tolA protein [Vibrio cholerae M66-2]
gi|227013736|gb|ACP09946.1| tolA protein [Vibrio cholerae O395]
gi|229337436|gb|EEO02453.1| TolA protein [Vibrio cholerae bv. albensis VL426]
gi|229343523|gb|EEO08498.1| TolA protein [Vibrio cholerae RC9]
gi|229347922|gb|EEO12881.1| TolA protein [Vibrio cholerae TMA 21]
gi|229351660|gb|EEO16601.1| TolA protein [Vibrio cholerae B33]
gi|229355571|gb|EEO20492.1| TolA protein [Vibrio cholerae BX 330286]
gi|229370282|gb|ACQ60705.1| TolA protein [Vibrio cholerae MJ-1236]
gi|254844628|gb|EET23042.1| tolA protein [Vibrio cholerae MO10]
gi|255737231|gb|EET92627.1| TolA protein [Vibrio cholera CIRS 101]
gi|297536950|gb|EFH75783.1| tolA protein [Vibrio cholerae RC385]
gi|297542457|gb|EFH78507.1| TolA [Vibrio cholerae MAK 757]
Length = 356
Score = 44.9 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 20/183 (10%), Positives = 63/183 (34%), Gaps = 2/183 (1%)
Query: 5 NGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNI--YNEDYHSSKYKKIEEPVV 62
+ IS+ +H + +L + + + P +M+ I + + + E
Sbjct: 13 KSITISLAMHGALVAILLWGADFTMSDPEPTGQMIEAVVIDPQLVRQQAQQIRSQREEAA 72
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
+ + + L R+ E + ++ E + K + +++ + L+E +
Sbjct: 73 KKEQERLDKLRRESEQLEKNRQAEEERIRQLKEQQAKEAKAAREAEKLREQKEQERLAAE 132
Query: 123 YDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIV 182
++ + K + + + K + V + ++ ++ R++
Sbjct: 133 QKAREEKERAAKAEAERKVKEEAAKKAEQERVAKEAAAAKAEQQRIEREKEAKLAEEKAK 192
Query: 183 RNR 185
R +
Sbjct: 193 REK 195
Score = 41.4 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 28/226 (12%), Positives = 75/226 (33%), Gaps = 10/226 (4%)
Query: 47 EDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKG 106
E ++K + + + +++ V + ++ + + A E K +
Sbjct: 138 EKERAAKAEAERKVKEEAAKKAEQERVAKEAAAAKAEQQRIEREKEAKLAEEKAKREKEV 197
Query: 107 EQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVE 166
++ L + + K K + + A++ +++ + ++ +
Sbjct: 198 AAKAEQERLAKEKAAKEAADKAKKEKERAAKAEAERKAQEAALNDIFGSLSEESQQNNAA 257
Query: 167 KSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVG 226
+ AI + N + F+ + +++ +L G ++ V+
Sbjct: 258 RQQFVTSEVGRYGAIYTQLIRQNLLVEDSFRGKQ---CRVNLKLIPTGTGALLGSLTVLD 314
Query: 227 GTELVRRMLRENARKAVIKSQAFRLS---PSTYKSWRNITLFFVPS 269
G L ++AV + +F L P + +NI L P
Sbjct: 315 GDSR----LCAATKRAVAQVNSFPLPKDQPDVVEKLKNINLTVAPE 356
>gi|298529940|ref|ZP_07017342.1| CheA signal transduction histidine kinase [Desulfonatronospira
thiodismutans ASO3-1]
gi|298509314|gb|EFI33218.1| CheA signal transduction histidine kinase [Desulfonatronospira
thiodismutans ASO3-1]
Length = 1094
Score = 44.9 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 22/207 (10%), Positives = 66/207 (31%), Gaps = 8/207 (3%)
Query: 47 EDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKG 106
+ +++++ + + + + + + D ++ E + K + +
Sbjct: 274 QPEKEPEHEQVYQEDEEEDKAREPEVEPETKAPPPPDPQEEKPAPPQAEQKEKSQARPQK 333
Query: 107 EQALKESALLRMPVSPYDKQKISK-------ATNKEQDLQGISFAEKKSIDTVVVRPDKK 159
Q K+ + + +L G + + + D +
Sbjct: 334 TQPDKDKKPQDKQAAQAQTSSMPDSLRVNVGLLENLMNLAGELVLSRNQLMQAISTQDDQ 393
Query: 160 ELLSKVEKSSRKRIPSQDAIAIVRNR-VIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLG 218
+ ++ Q+AI + R + V +N R + +L +G +
Sbjct: 394 TINLAGQRIDLVTSELQEAIMLTRMQPVSNVFNKFPRVVRDMSQSLGKDIELYLEGKEVE 453
Query: 219 KINVDVVGGTELVRRMLRENARKAVIK 245
+ G ++ + ++R +A A+ K
Sbjct: 454 LDKTIIEGLSDPLTHLVRNSADHAIEK 480
Score = 38.0 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 11/136 (8%), Positives = 37/136 (27%), Gaps = 2/136 (1%)
Query: 33 ISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTH 92
+ LS++ + + + + S ++ E +
Sbjct: 229 VDEDSELSIEVLEHPGDAGEENLQTIWEKTFTPSDSSTLDAQNSPQPEKEPEHEQVYQED 288
Query: 93 ATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTV 152
E++ + +A +P ++ K ++ + + +KK D
Sbjct: 289 EEEDKAREPEVEPETKAPPPPDPQEEKPAPPQAEQ--KEKSQARPQKTQPDKDKKPQDKQ 346
Query: 153 VVRPDKKELLSKVEKS 168
+ + + +
Sbjct: 347 AAQAQTSSMPDSLRVN 362
>gi|209517621|ref|ZP_03266459.1| protein TolA [Burkholderia sp. H160]
gi|209501917|gb|EEA01935.1| protein TolA [Burkholderia sp. H160]
Length = 336
Score = 44.9 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 17/115 (14%), Positives = 33/115 (28%), Gaps = 8/115 (6%)
Query: 136 QDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSD 195
+ + A+ + + + S S I VR V N + P+
Sbjct: 211 DNERRARLAQMQGMAGGTSSSSDGLGKNGTGSGSGGTATSPGYIDKVRRAVQPNISWPNA 270
Query: 196 FKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFR 250
L + + + G VL G + + A +AV ++
Sbjct: 271 A---DGLETTIAVRCSPTGTVLSATVSRSSGN-----QAWDDAALRAVQRTDPMP 317
>gi|114706007|ref|ZP_01438910.1| hypothetical protein FP2506_16114 [Fulvimarina pelagi HTCC2506]
gi|114538853|gb|EAU41974.1| hypothetical protein FP2506_16114 [Fulvimarina pelagi HTCC2506]
Length = 360
Score = 44.9 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 22/225 (9%), Positives = 57/225 (25%), Gaps = 8/225 (3%)
Query: 30 LVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQT 89
++ +V E SS+ ++ + ++ + + +
Sbjct: 124 SEIMTEAPTEAVTESEVETVPSSEQAEVAAIEPEAPSAATVTETVEAMDPQPDNVPRPTR 183
Query: 90 KTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSI 149
+ + + + +E R Q ++ + Q G + +
Sbjct: 184 RPNPPPRRVAEDPPERAQPRREEPRRERAQQQRR--QAQAERAERTQAASGSRGRNQANA 241
Query: 150 DTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKR-FKKLRVKMHF 208
+ + V R+ P+ +R + + F
Sbjct: 242 QRGSRESGRAARSGGGRSGVSASQAQSNYSGQVLARIRGAQRYPTAARRQRAQGTASVSF 301
Query: 209 QLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSP 253
+ +G G V G ++ A V ++ F P
Sbjct: 302 TVTARGGASGIRLVRSSGNA-----LIDRAAVDTVRRASPFPPIP 341
>gi|217978805|ref|YP_002362952.1| TonB family protein [Methylocella silvestris BL2]
gi|217504181|gb|ACK51590.1| TonB family protein [Methylocella silvestris BL2]
Length = 252
Score = 44.9 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 31/249 (12%), Positives = 64/249 (25%), Gaps = 29/249 (11%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
GLA S LH L F P E+L V+ + E+ +Q
Sbjct: 17 GLAASFALHCAL--ALPFVLEELAAGP-DEPEILVVELQGVVAET-----QTEQKTLQET 68
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
+ E D + + + + + +
Sbjct: 69 KGAAEQDAADAGRPAQAAAAPPEPPPPEDPPKDVPPPEETFPEPPAPAPTPPPTEAAPPQ 128
Query: 126 QKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNR 185
N + S A++ + K + ++ +
Sbjct: 129 PSPGAGANTSAGAEERSAAQRIRTERDAELDRLKA-----------------YVKLLTKK 171
Query: 186 VIANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVI 244
V A+ P + ++ + + F + G + + + + L +A K +
Sbjct: 172 VQAHLAYPDEERQAGLQGAATVSFTILPGGAIRPESLKIISTSGQPK---LDASALKTIR 228
Query: 245 KSQAFRLSP 253
S F P
Sbjct: 229 LSAPFDPPP 237
>gi|95929658|ref|ZP_01312400.1| TonB-like [Desulfuromonas acetoxidans DSM 684]
gi|95134355|gb|EAT16012.1| TonB-like [Desulfuromonas acetoxidans DSM 684]
Length = 283
Score = 44.9 bits (104), Expect = 0.014, Method: Composition-based stats.
Identities = 31/263 (11%), Positives = 74/263 (28%), Gaps = 29/263 (11%)
Query: 5 NGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVD------NIYNEDYHSSKYKKIE 58
L +S +H+ + P ++S++ + + +S+ Y
Sbjct: 6 QTLILSTAIHLSL-GAAVVGLSQLQPAPAQEL-LISLEGVGFSRAVTTQPKNSAGYAATP 63
Query: 59 EPVVQFKGSSQE---------NLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQA 109
P + Q + E + + +
Sbjct: 64 SPTPPETKRQPKLQPEPQPEPQPEPQPEPQPEPQPEPQPEPQPEPQPEPQPEPQPEPQPE 123
Query: 110 LKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDK------KELLS 163
+ Q+ S + + ++ ++T + P + E
Sbjct: 124 PQPEPQPEPQNENNLDQRQSDPVDHHLEQSAMNTDTLHRVETAPLSPQQGTPGSGGESHD 183
Query: 164 KVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKINV 222
K +++ A + ++ P +R +VK+ F++ G V V
Sbjct: 184 KTQRAEALNNYLAAHFAYISKQIQRALRYPRQAQRKGLGGQVKVRFKICSDGSVRDIEVV 243
Query: 223 DVVGGTELVRRMLRENARKAVIK 245
+ G + +L +NA K V +
Sbjct: 244 ESCGHS-----ILDKNAVKTVRR 261
>gi|39996799|ref|NP_952750.1| TonB-dependent receptor [Geobacter sulfurreducens PCA]
gi|39983687|gb|AAR35077.1| TonB-dependent receptor, putative [Geobacter sulfurreducens PCA]
gi|307634904|gb|ADI84535.2| conserved hypothetical protein [Geobacter sulfurreducens KN400]
Length = 237
Score = 44.5 bits (103), Expect = 0.014, Method: Composition-based stats.
Identities = 12/167 (7%), Positives = 42/167 (25%), Gaps = 8/167 (4%)
Query: 91 THATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSID 150
+ + E A+ L + +++ + + S
Sbjct: 58 RPVAPSPPDSKPAPVPEPAVASDMSLPVENEQPPAEEVLPPPQAVEPPPPPVVSAPPSPL 117
Query: 151 TVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNI-PSDFKRFKKLRVKMHFQ 209
++ + +++ S + + ++ W + + +
Sbjct: 118 SLGMSRGFFRGIAEG--ESLRSDVREYYFTLLETINERWWTVANASGMDLGRSEAMFTIV 175
Query: 210 LNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPSTY 256
+ + G ++ V G +A+ + P +Y
Sbjct: 176 MKKSGEMVDVQLVKSTGS-----PAYDRLILQAIQAANPLPPLPDSY 217
>gi|301030000|ref|ZP_07192974.1| protein, TonB family [Escherichia coli MS 196-1]
gi|299877220|gb|EFI85431.1| protein, TonB family [Escherichia coli MS 196-1]
Length = 183
Score = 44.5 bits (103), Expect = 0.014, Method: Composition-based stats.
Identities = 20/167 (11%), Positives = 47/167 (28%), Gaps = 6/167 (3%)
Query: 88 QTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKK 147
T+ + ++ ++ A E + K+ K Q A
Sbjct: 1 MTEEKQQTEDRQQRPVTEDSDATIEITRKKKSSDGEKKKTRPPRKIKAQTSDSNPTAVSS 60
Query: 148 SIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFK-RFKKLRVKM 206
+ + + S+++ + V+ + P D + R + +
Sbjct: 61 NAAPQALVESSRIAAPFNSDSTKRDNSEASWESRVKGHLNRYKRYPGDARKRARTGTAVV 120
Query: 207 HFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSP 253
F +N +G ++ G L A + ++Q P
Sbjct: 121 TFTVNTEGTIVSSFLEISSGT-----FSLDREAIAVLERAQPLPKPP 162
>gi|74313102|ref|YP_311521.1| colicin Js-sensitive putative membrane protein [Shigella sonnei
Ss046]
gi|73856579|gb|AAZ89286.1| colicin Js-sensitive putative membrane protein [Shigella sonnei
Ss046]
Length = 183
Score = 44.5 bits (103), Expect = 0.014, Method: Composition-based stats.
Identities = 20/167 (11%), Positives = 47/167 (28%), Gaps = 6/167 (3%)
Query: 88 QTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKK 147
T+ + ++ ++ A E + K+ K Q A
Sbjct: 1 MTEEKQQTEDRQQRPVTEDSDATIEITRKKKSSDGEKKKTRPPRKIKAQTSDSNPTAVSS 60
Query: 148 SIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFK-RFKKLRVKM 206
+ + + S+++ + V+ + P D + R + +
Sbjct: 61 NAAPQALVESSRIAAPFNSDSTKRDNSEASWESRVKGHLNRYKRYPGDARKRARTGTAVV 120
Query: 207 HFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSP 253
F +N +G ++ G L A + ++Q P
Sbjct: 121 TFTVNTEGTIVSSFLEISSGT-----LSLDREAIAVLERAQPLPKPP 162
>gi|39934420|ref|NP_946696.1| TonB protein colicin J receptor [Rhodopseudomonas palustris CGA009]
gi|39648269|emb|CAE26789.1| possible TonB protein, possible colicin J receptor
[Rhodopseudomonas palustris CGA009]
Length = 237
Score = 44.5 bits (103), Expect = 0.014, Method: Composition-based stats.
Identities = 17/171 (9%), Positives = 42/171 (24%), Gaps = 6/171 (3%)
Query: 85 FSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFA 144
R +G + + ++ + +
Sbjct: 54 PPGPNIRGDDNLVEVRLIGPQGPASNNQEQPQTKSAEQTSTERPPEIAPQPVMQTAAIHD 113
Query: 145 EKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKR-FKKLR 203
+ V + + S + + + P++ KR +
Sbjct: 114 PEIIEAPVPAPTQRARASAPPVSRLSLDQKSAAFQRTLLSHIARFRQYPNEAKRLRTQGV 173
Query: 204 VKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPS 254
V++ F + + G V G +L E A V +++ P+
Sbjct: 174 VRLIFAMRRDGSVNQMTVATSSGSV-----ILDEAAIATVRRAEPLPRIPA 219
>gi|238798319|ref|ZP_04641803.1| TonB domain protein [Yersinia mollaretii ATCC 43969]
gi|238717866|gb|EEQ09698.1| TonB domain protein [Yersinia mollaretii ATCC 43969]
Length = 245
Score = 44.5 bits (103), Expect = 0.014, Method: Composition-based stats.
Identities = 24/215 (11%), Positives = 63/215 (29%), Gaps = 29/215 (13%)
Query: 53 KYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKE 112
+ V Q V + V+ + ++ + + E+ +
Sbjct: 24 AEPEFTPNVEQNPVVGITQAVSEPEVEPAESQPEQVSELLTAPEQPNAVLIVEKERERVK 83
Query: 113 SALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKR 172
+ +P + K K ++ + A + + + +++ + S
Sbjct: 84 KEPTKAKRTPKEVIKPRKPIMEDTPVNRSKPAPSAVTSSSTLSGENQQIAAATNSDSLH- 142
Query: 173 IPSQDAIAIVRNRVIANWN-------------IPSDFKRFKKLRVKMHFQLNQKGFVLGK 219
++ NW P K+ ++ + F +N++G VL
Sbjct: 143 ----------MQQIKLNWRSRLQGHLMGYKRYPPIAKKQRQQGTATIRFVVNKQGDVLSA 192
Query: 220 INVDVVGGTELVRRMLRENARKAVIKSQAFRLSPS 254
++ G +L A + ++Q P+
Sbjct: 193 QLINSSG-----VAILDHEALALLKRAQPLPKPPT 222
>gi|312796779|ref|YP_004029701.1| TolA protein [Burkholderia rhizoxinica HKI 454]
gi|312168554|emb|CBW75557.1| TolA protein [Burkholderia rhizoxinica HKI 454]
Length = 320
Score = 44.5 bits (103), Expect = 0.014, Method: Composition-based stats.
Identities = 23/215 (10%), Positives = 60/215 (27%), Gaps = 16/215 (7%)
Query: 45 YNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSS 104
E ++ + E Q + + + + + + ++ Q + K+ +
Sbjct: 95 QQEAQRQAQLAEQEHVRRQAEQQADAHRQQLAAQKAAAEKLKQQLAEQQRQEALKKQQAL 154
Query: 105 KGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSK 164
K +Q ++ L + + +++ + + + ++ +
Sbjct: 155 KAQQLKEQQEKLALAQAKKQQEQQAAKAKQAAEQAARQKLDQARRARLAQLQGLAGDAPG 214
Query: 165 VE--------KSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFV 216
S S V+ RV N + L + + G +
Sbjct: 215 GNGLAKSGTGTGSGGTATSAGYADKVQRRVRPN---VIWSGPTEGLDTLIAVRCAPDGAL 271
Query: 217 LGKINVDVVGGTELVRRMLRENARKAVIKSQAFRL 251
L G + + A +AV +S L
Sbjct: 272 LDARIARSSGNAQW-----DDAALRAVQRSDPMPL 301
>gi|229846470|ref|ZP_04466578.1| cell envelope integrity inner membrane protein TolA [Haemophilus
influenzae 7P49H1]
gi|229810563|gb|EEP46281.1| cell envelope integrity inner membrane protein TolA [Haemophilus
influenzae 7P49H1]
Length = 418
Score = 44.5 bits (103), Expect = 0.014, Method: Composition-based stats.
Identities = 13/123 (10%), Positives = 36/123 (29%), Gaps = 12/123 (9%)
Query: 147 KSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKM 206
+ + S +++ + + +F ++
Sbjct: 304 SASKGGNTNKGGTQGSGAALGSGDGGKVGDQYAGVIKKEIQRRFLKDPNFAGK---VCRI 360
Query: 207 HFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSP--STYKSWRNITL 264
QL + G +LG + + A AV +++ +P Y+ +++ +
Sbjct: 361 KIQLGRDGTILGYQKISGSDD-------ICSAALSAVARTKKVPAAPSDEIYEKYKSPII 413
Query: 265 FFV 267
F
Sbjct: 414 DFD 416
Score = 41.0 bits (94), Expect = 0.15, Method: Composition-based stats.
Identities = 17/120 (14%), Positives = 40/120 (33%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
AIS++LH + LL + + + E + ++ Q K
Sbjct: 12 AFAISILLHFILFGLLILSSLYHTVEIMGGGEGEGDAIGAVIVDTGTAAQEWGRIQQQKK 71
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
G + + + V+E + + H E + + + EQ ++ + + +
Sbjct: 72 GQADKQKRPEPVVEEKPPEPNQEEIKHQQEVQRQEELKRQQEQQRQQEIKKQQEQARQEA 131
>gi|167563918|ref|ZP_02356834.1| TolA protein [Burkholderia oklahomensis EO147]
Length = 337
Score = 44.5 bits (103), Expect = 0.015, Method: Composition-based stats.
Identities = 26/208 (12%), Positives = 55/208 (26%), Gaps = 9/208 (4%)
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
+ + Q ++ + E + Q + K+ ++ + +
Sbjct: 139 EREKQKQAEKLKQQQLAEQQRKLEQQKLEQQKLEQQKKQEQLAAQKKANAEKAEKAAKAA 198
Query: 123 YDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIV 182
+ + A K + A+ + I + S S S V
Sbjct: 199 AAAKANAAANAKLDKERQARLAQLQGIAGGGSGGGEGLAKSGTGTGSGGNAASPGYADKV 258
Query: 183 RNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKA 242
R RV N L + + G VL G + + A
Sbjct: 259 RRRVKPN---IVWAGERDSLVTVVAIRCTPSGDVLSTSIRRSSGNSGW-----DQAVISA 310
Query: 243 VIKSQAFRLSPSTYKSWRNITLFFVPSK 270
+ S + ++ IT+ F ++
Sbjct: 311 IQASVPLP-PDTNGRTPPEITITFKAAE 337
>gi|145588404|ref|YP_001155001.1| TonB family protein [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
gi|145046810|gb|ABP33437.1| TonB family protein [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
Length = 295
Score = 44.5 bits (103), Expect = 0.015, Method: Composition-based stats.
Identities = 31/256 (12%), Positives = 71/256 (27%), Gaps = 37/256 (14%)
Query: 13 LHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENL 72
+H++FL F + V + LSV + + K G E
Sbjct: 42 IHILFLS---FRWGVGEVQNRRLNTPLSVVLVNASNKLPPKQANKLAQADLQGGGKTE-- 96
Query: 73 VRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKAT 132
T+ + + + ++ E K+ + + Q + +
Sbjct: 97 ----------------TQDATALHRARMGAEARLEILEKQQRQMLAKLDEQRTQSRGRKS 140
Query: 133 NKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWN- 191
Q + + + + + ++ + ++ K + +R ++ A +
Sbjct: 141 GDAQKMVSQLNSLEAELAKRLQVEGREPRRKVMTGANTKAVTFAHYYDAMRQKIEAYGSA 200
Query: 192 ---IPSDFKRFKKLRVKMH------FQLNQKGFVLGKINVDVVGGTELVRRMLRENARKA 242
+ + L + + N +G G G E L A
Sbjct: 201 FFPRANGRPLYGSLVIVVSVDSQGGITTNPQGK-EGLSIGRSSGNPE-----LDRQALAI 254
Query: 243 VIKSQAFRLSPSTYKS 258
V S F P+ +
Sbjct: 255 VRSSAPFGPFPAEMRQ 270
>gi|268680186|ref|YP_003304617.1| TonB family protein [Sulfurospirillum deleyianum DSM 6946]
gi|268618217|gb|ACZ12582.1| TonB family protein [Sulfurospirillum deleyianum DSM 6946]
Length = 251
Score = 44.5 bits (103), Expect = 0.015, Method: Composition-based stats.
Identities = 32/253 (12%), Positives = 69/253 (27%), Gaps = 33/253 (13%)
Query: 5 NGLAISMILHVMFLLL-LYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQ 63
L +S +LH + L F + + S+ +L + NI
Sbjct: 16 KALLLSFVLHASVIGFYLLFMYQKPSYIMPSKAIVLEISNI------------------- 56
Query: 64 FKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPY 123
V + + + + K + + P
Sbjct: 57 -------ERVAPKPPLPTPLQPEPVAQPEVVKPMETVKPIEPMKPIEKVKPKPKPMLKPK 109
Query: 124 DKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVR 183
+ K + + + V P ++ + ++R
Sbjct: 110 PIAEPKAFQEKAVEETTPPPIPSLASEPVATAPSLATTPMTPSSTNSAEPYERTDFEVIR 169
Query: 184 NRVIANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKA 242
++V++ PS +R V++ ++ G +L + R +L E A A
Sbjct: 170 DKVLSRLVYPSVARRMGWNGIVQVELVIDTSGKLLSALIHKSS-----NRTVLDEAALSA 224
Query: 243 VIKSQAFRLSPST 255
+K Q +L
Sbjct: 225 ALKLQGQQLPKPK 237
>gi|163854964|ref|YP_001629262.1| colicin exporter [Bordetella petrii DSM 12804]
gi|163258692|emb|CAP40991.1| colicin exporter [Bordetella petrii]
Length = 395
Score = 44.5 bits (103), Expect = 0.015, Method: Composition-based stats.
Identities = 15/96 (15%), Positives = 26/96 (27%), Gaps = 7/96 (7%)
Query: 165 VEKSSRKRIPSQDAIAIVRNRVIANWNIP-SDFKRFKKLRVKMHFQLNQKGFVLGKINVD 223
+++ + A VR V P + + QL+ G V G
Sbjct: 295 ADRNQQGGGRDDGYGAKVRACVRPGVAYPTPPRSGSENPTAQYRVQLSSDGKVTGVSLTR 354
Query: 224 VVGGTELVRRMLRENARKAVIKSQAFRLSPS-TYKS 258
G T + + F + Y+S
Sbjct: 355 SSGNTG-----FDRAVETGIRRCNPFPKPSTGRYES 385
Score = 43.0 bits (99), Expect = 0.041, Method: Composition-based stats.
Identities = 18/153 (11%), Positives = 45/153 (29%), Gaps = 4/153 (2%)
Query: 4 ENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQ 63
L +++++H++ + L F N + P + V+ D S ++ +
Sbjct: 22 RKALGLAILVHILLFIALVFGVNWRSENPGP----VQVELWAEGDTPDSPPPDVQPDEPK 77
Query: 64 FKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPY 123
+ + + + + + K + E A +
Sbjct: 78 PEPEPPKPQPQPEPAPQPEPQPQPEPPPPPPPPVEKPQPPQPDPEIALEEARKKREEEEK 137
Query: 124 DKQKISKATNKEQDLQGISFAEKKSIDTVVVRP 156
+Q+ A K + + AE K +
Sbjct: 138 ARQEAEAAKEKARLEEERKQAELKEKQRLEQER 170
>gi|12802723|gb|AAK08071.1| TonB [Brucella melitensis]
Length = 271
Score = 44.5 bits (103), Expect = 0.015, Method: Composition-based stats.
Identities = 23/242 (9%), Positives = 64/242 (26%), Gaps = 17/242 (7%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPI-SRREMLSVDNIYNEDYHSSKYKKIEEPV 61
L G+ + ++ H + + P + + V+ + + + + E
Sbjct: 19 LGAGILV-LLAHAA--GAYVIHMAQEDNQPEGTEVAAMVVELVPDLVAPAEERVSEEVQP 75
Query: 62 VQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETK--RSSSSKGEQALKESALLRMP 119
+E + + Q E + + +
Sbjct: 76 ETTTEQPEEVQPEPEPEPQPEAKAEPQQVQEPEEVIPDVVEAQKPEP----------KKV 125
Query: 120 VSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAI 179
++ + ++ + + K + E S+ +
Sbjct: 126 EKLKPQKPKPEKVKPKKRKRRRKPVRASAPRVDADNGAKVAASKRGETSASAGVIWAKWT 185
Query: 180 AIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENA 239
+ +++ + N R + + F ++ G VL G + + L E A
Sbjct: 186 SRLQSHMARNARFLQGKSRNTRGEAHVAFVIDPSGNVLSARIAVSSGDPAVDQLAL-EAA 244
Query: 240 RK 241
R+
Sbjct: 245 RR 246
>gi|302326769|gb|ADL25970.1| TonB family protein [Fibrobacter succinogenes subsp. succinogenes
S85]
Length = 292
Score = 44.5 bits (103), Expect = 0.016, Method: Composition-based stats.
Identities = 32/299 (10%), Positives = 83/299 (27%), Gaps = 39/299 (13%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
+ + +++ H+ + L N+ L P + + + ++ + K P
Sbjct: 1 MFKIIVCAVVFHLAVVGTLIALNNIDLSKPAEEIPVF--EMVQVDEPVKAPAAKTALPEP 58
Query: 63 QFKG------------------------------SSQENLVRDFSVQENGDRFSDQTKTH 92
+ + +E T
Sbjct: 59 EPQQAPKVEPPPPQPPEPVPETTPEPEPAPEPTPVKTLEPEAPQVPEEPAPEVKPDTPEP 118
Query: 93 ATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTV 152
E K E+ K + + P +K K+ + + + D
Sbjct: 119 VPVPEPKAEEKKPEEKVEKPKPVEKPVEKPVEKVAKKTVEKKKVEKKPAKKPKDDDFDID 178
Query: 153 VVRPDKKELLSKVEKSSR--KRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQL 210
+ K + ++ + Q + + ++++N+N P+ + + + F +
Sbjct: 179 DLNLQKSFEMPSLKAVNPIDMDPLMQVFLERAKAKIMSNFNPPNGLTIDRDAKTMVQFTV 238
Query: 211 NQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPSTYKSWRNITLFFVPS 269
+ G + + + +AV S+ L P+ S + F P+
Sbjct: 239 ERSGAITSVFLKRSSSNS-----AWDHLSMRAVKISKLPELPPTYKGSSLVLQFNFTPN 292
>gi|289547946|ref|YP_003472934.1| TonB family protein [Thermocrinis albus DSM 14484]
gi|289181563|gb|ADC88807.1| TonB family protein [Thermocrinis albus DSM 14484]
Length = 219
Score = 44.5 bits (103), Expect = 0.016, Method: Composition-based stats.
Identities = 33/254 (12%), Positives = 82/254 (32%), Gaps = 51/254 (20%)
Query: 1 MRLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP 60
M L +S + H + L+ L+ + P R ++++ ++ + + K
Sbjct: 1 MISRGALLLSAVAHALVLVHLHLTPPLPQTAPEGRVLLVNLTDLQQVSAPAKAFPKSAHK 60
Query: 61 VVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPV 120
E S+ + + QT + E + + + + ++ A V
Sbjct: 61 ---------ERRSSVRSLTPSSVKSDHQTPSAQKEFQVSQGNQTPAAAVTEKEASKSESV 111
Query: 121 SPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIA 180
+ +++ ++ ++
Sbjct: 112 AEEPPKRVFSPEEAGEE------------------------------------YLKNYGQ 135
Query: 181 IVRNRVIANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENA 239
+VR+ V + P KR + +V + L+++G +L G ++L + A
Sbjct: 136 LVRDAVARYLSYPPLAKRMGWEGKVILRIVLDKEGKLLDLTIQKSSG-----YQLLDQAA 190
Query: 240 RKAVIKSQAFRLSP 253
+AV ++ +F P
Sbjct: 191 LEAVERAHSFFPKP 204
>gi|294056292|ref|YP_003549950.1| TonB family protein [Coraliomargarita akajimensis DSM 45221]
gi|293615625|gb|ADE55780.1| TonB family protein [Coraliomargarita akajimensis DSM 45221]
Length = 251
Score = 44.5 bits (103), Expect = 0.016, Method: Composition-based stats.
Identities = 30/256 (11%), Positives = 62/256 (24%), Gaps = 21/256 (8%)
Query: 10 SMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQ 69
S+ILH + L+ L+ +Q P + + + P
Sbjct: 14 SVILHTVVLVALFLATIIQAFKPKKEEHVFEM---------------VSMPEDLPVAELN 58
Query: 70 ENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKIS 129
D + + K + M + KQ
Sbjct: 59 TAPDVPPPPDLPDIPDIDIPEPTPQPPVPPAPKPTPQPPKPKPEPVQEMSYEDFLKQHGK 118
Query: 130 KATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIAN 189
++ Q ++ K V L + + + Q IA + +
Sbjct: 119 PKPRQQPRPQPVTRDLKVDKVDVGQVHVPTHLPKSQQPTRAEMDALQRYIAALGANLDRA 178
Query: 190 WNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAF 249
W P +L V + F ++ G + + A +AV
Sbjct: 179 WRRPQSL-GGSRLAVTVFFDVSSSGVITNIRF--RPSSGDATFDQSVRAAFRAVR--SPG 233
Query: 250 RLSPSTYKSW-RNITL 264
++ + +
Sbjct: 234 PTPTGRSHTFEKTFRM 249
>gi|123232573|emb|CAM24264.1| titin [Mus musculus]
gi|123232655|emb|CAM23453.1| titin [Mus musculus]
Length = 8268
Score = 44.5 bits (103), Expect = 0.016, Method: Composition-based stats.
Identities = 12/135 (8%), Positives = 28/135 (20%), Gaps = 2/135 (1%)
Query: 29 LLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDR--FS 86
P + + +P + R + + +
Sbjct: 7333 PKKPEAPAAEVPEVPKTAVPQKKIPEAIPPKPESPPLEETVPEKTRPMAPPKKPEATTLP 7392
Query: 87 DQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEK 146
+T+ K +A P + + E + EK
Sbjct: 7393 VPEVQETVPEKTRPVGPPKKPEATTVPVPEVQETIPEKTRPAAPPKKPEATAVPETIPEK 7452
Query: 147 KSIDTVVVRPDKKEL 161
+ RP+ +
Sbjct: 7453 TRPEAPPKRPEATTV 7467
Score = 39.1 bits (89), Expect = 0.64, Method: Composition-based stats.
Identities = 14/128 (10%), Positives = 35/128 (27%), Gaps = 8/128 (6%)
Query: 26 NVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQ--ENLVRDFSVQENGD 83
+ + + + + KK E V + R + + +
Sbjct: 7382 PPKKPEATTLPVPEVQETVPEKTRPVGPPKKPEATTVPVPEVQETIPEKTRPAAPPKKPE 7441
Query: 84 R------FSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQD 137
++T+ A + ++ E ++P P K + T E+
Sbjct: 7442 ATAVPETIPEKTRPEAPPKRPEATTVPVPEADQAVVPEKKVPRVPPKKVEAPPITVPEEP 7501
Query: 138 LQGISFAE 145
+ I +
Sbjct: 7502 KEVIPEKK 7509
>gi|238764502|ref|ZP_04625450.1| TonB domain protein [Yersinia kristensenii ATCC 33638]
gi|238697314|gb|EEP90083.1| TonB domain protein [Yersinia kristensenii ATCC 33638]
Length = 228
Score = 44.5 bits (103), Expect = 0.016, Method: Composition-based stats.
Identities = 21/208 (10%), Positives = 59/208 (28%), Gaps = 8/208 (3%)
Query: 49 YHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQ 108
++ + E + N ++ + SD N +
Sbjct: 6 STEPEFTQNLEQDPVVGITQNINEPIVEQLENQPEDISDMLTAPEHSNASLIVERKVETA 65
Query: 109 ALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKS 168
+ + + R+ ++ E + + A S +
Sbjct: 66 KKEPTKVKRLQQKVMTPRQPISEPISESPSKPSAPAAATSTPLSGESHQVAAAANSDSAH 125
Query: 169 SRKRIPSQDAIAIVRNRVIANWNIPSDFK-RFKKLRVKMHFQLNQKGFVLGKINVDVVGG 227
++K + + ++ + P K + ++ + F +N +G+VL + G
Sbjct: 126 NQKSKM--NWKSRLQGHLAGFKRYPLSAKKQRQQGTASIRFVVNTEGYVLSAKLIKSSG- 182
Query: 228 TELVRRMLRENARKAVIKSQAFRLSPST 255
L + + + ++Q P+
Sbjct: 183 ----IAALDQESLAMIKRAQPLPQPPAG 206
>gi|258621414|ref|ZP_05716448.1| tolA protein [Vibrio mimicus VM573]
gi|262171198|ref|ZP_06038876.1| TolA protein [Vibrio mimicus MB-451]
gi|258586802|gb|EEW11517.1| tolA protein [Vibrio mimicus VM573]
gi|261892274|gb|EEY38260.1| TolA protein [Vibrio mimicus MB-451]
Length = 356
Score = 44.5 bits (103), Expect = 0.017, Method: Composition-based stats.
Identities = 19/183 (10%), Positives = 63/183 (34%), Gaps = 2/183 (1%)
Query: 5 NGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNI--YNEDYHSSKYKKIEEPVV 62
+ +S+ +H + +L + + + P +M+ I + + + E
Sbjct: 13 KSITVSLAMHGALVAILLWGADFTMSDPEPTGQMIEAVVIDPQLVRQQAQQIRSQREEAA 72
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
+ + + L R+ E + ++ E + K + +++ + L+E +
Sbjct: 73 KKEQERLDKLRRESEQLEKNRQAEEERIRELKEQQAKEAKAAREAEKLREQKEQERLAAE 132
Query: 123 YDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIV 182
++ + K + + + K + V + ++ ++ R++
Sbjct: 133 QKAREEKERAAKAEAERKVKEEAAKKAEQERVAKEAAAAKAEQQRIEREKEAKLAEEKAK 192
Query: 183 RNR 185
R +
Sbjct: 193 REK 195
Score = 42.6 bits (98), Expect = 0.067, Method: Composition-based stats.
Identities = 29/226 (12%), Positives = 76/226 (33%), Gaps = 10/226 (4%)
Query: 47 EDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKG 106
E ++K + + + +++ V + ++ + + A E K +
Sbjct: 138 EKERAAKAEAERKVKEEAAKKAEQERVAKEAAAAKAEQQRIEREKEAKLAEEKAKREKEI 197
Query: 107 EQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVE 166
++ L + + +K K K + A++ +++ + ++ +
Sbjct: 198 AAKAEQDRLAKEKAAKEAAEKAKKEKEKAAKAEADRKAQEAALNDIFGSLSEESQQNNSA 257
Query: 167 KSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVG 226
+ AI + N + F+ + +++ +L G ++ V+
Sbjct: 258 RQQFVTSEVGRYGAIYTQLIRQNLLVEDSFRGKQ---CRVNLKLIPTGTGALLGSLTVLD 314
Query: 227 GTELVRRMLRENARKAVIKSQAFRLS---PSTYKSWRNITLFFVPS 269
G L ++AV + +F L P + +NI L P
Sbjct: 315 GDSR----LCAATKRAVAQVNSFPLPKDQPDVVEKLKNINLTVAPE 356
>gi|40063407|gb|AAR38218.1| tonB protein, putative [uncultured marine bacterium 580]
Length = 233
Score = 44.5 bits (103), Expect = 0.017, Method: Composition-based stats.
Identities = 29/256 (11%), Positives = 74/256 (28%), Gaps = 51/256 (19%)
Query: 1 MRLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP 60
+ L + + +S+I+H +F++ L + P+ VD I+N + +++
Sbjct: 11 LNLTHAIILSLIIHALFVMKLQISNFNLKPKPV-------VDIIFNTEI-------VKQV 56
Query: 61 VVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPV 120
+ + E ++ ++
Sbjct: 57 APKVIPQQIPKPIIKPKPVIKPKPIEKPKPIPKPIPEPIVEPIAEPIVEPIIEPVIEPLS 116
Query: 121 SPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIA 180
+ ++ +S+ +S +
Sbjct: 117 ESIETNEV-------------------------------TQISEQTPTSPNPQVVNNYSN 145
Query: 181 IVRNRVIANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENA 239
++R + + P +R K + V + Q+ G ++ K G ++L +
Sbjct: 146 LLRAHIAKHKKYPRIAQRRKMQGEVVIAIQIGGDGSLISKNIQKSSG-----HKVLDKEG 200
Query: 240 RKAVIKSQAFRLSPST 255
+ KS+ F + P T
Sbjct: 201 MNMMEKSKPFPVPPDT 216
>gi|42522010|ref|NP_967390.1| putative periplasmic protein TonB [Bdellovibrio bacteriovorus
HD100]
gi|39574541|emb|CAE78383.1| putative periplasmic protein TonB [Bdellovibrio bacteriovorus
HD100]
Length = 316
Score = 44.5 bits (103), Expect = 0.017, Method: Composition-based stats.
Identities = 31/298 (10%), Positives = 77/298 (25%), Gaps = 53/298 (17%)
Query: 4 ENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQ 63
+ +S++LH + + Y L +E +S+D + E +
Sbjct: 8 RKYIVLSLLLHFVVVGGFYIT--SLLKEEAPPKETVSIDFLTPEQLQQFAQAEQALQKKA 65
Query: 64 ------------FKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALK 111
+++E + F +N + + + +
Sbjct: 66 LQVPANQIVEQSETSANEEEVDTRFLSAKNQKVNKQTIAVERGQFQNTKKEQAVKSGPKG 125
Query: 112 ESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRK 171
+ + S +++I+K K D +K + + + +
Sbjct: 126 DGRQKNVAKSEESQKQIAKDLFKGFDANEAIERQKLADQKTGLGEGRGTGEQNTGTGAEA 185
Query: 172 RIPSQ---------------------DAIAIVRNRVIANWNIP-------------SDFK 197
+ +R ++ +W +
Sbjct: 186 SQSNDYIKDVEVGLETLLNTREFKYYSYYNRIRKQLSQHWEGRVRDKLSKMFKEGRAPAA 245
Query: 198 RFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPST 255
+ K+ LN KG ++ + G + L + A +A + F P
Sbjct: 246 ANQDRITKLMIVLNDKGTLVRVQVLSDSGVQD-----LDDAAIEAFRAAAPFPNPPKG 298
>gi|294649530|ref|ZP_06726951.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC
19194]
gi|292824591|gb|EFF83373.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC
19194]
Length = 235
Score = 44.5 bits (103), Expect = 0.017, Method: Composition-based stats.
Identities = 31/264 (11%), Positives = 62/264 (23%), Gaps = 50/264 (18%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
GL + + LH++ +L + ++ P+ + L + I + + E
Sbjct: 18 GLGVVLFLHLVIAYILVTSLTTEMTKPVEKPVELLI--IQDIEPPPPPPPPKPEEKPPEP 75
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
E + + + ++ + K T ++ A+ + +
Sbjct: 76 PKMVEKVAKMPDPPKQVEKVTPVAKPTPTPPVQNTVATPTAAPAVTAPSPSPVAAPVAAP 135
Query: 126 QKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNR 185
K + + S KK +E
Sbjct: 136 APAPKPAGISRGVSEGSAGCKKPDYPREQEMAGEEGT----------------------- 172
Query: 186 VIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIK 245
V+M ++ G V+ G R L A KA
Sbjct: 173 ------------------VRMRLLVDSSGKVIDAKVNKSSG-----VRALDRAATKAYSL 209
Query: 246 SQAFRLSPSTYKS--WRNITLFFV 267
W I F
Sbjct: 210 CSFTPAMKDGVPQQDWYEIEYTFT 233
>gi|238025237|ref|YP_002909469.1| hypothetical protein bglu_2g19090 [Burkholderia glumae BGR1]
gi|237879902|gb|ACR32234.1| Hypothetical protein bglu_2g19090 [Burkholderia glumae BGR1]
Length = 379
Score = 44.5 bits (103), Expect = 0.017, Method: Composition-based stats.
Identities = 10/67 (14%), Positives = 19/67 (28%), Gaps = 5/67 (7%)
Query: 184 NRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAV 243
RV + RV + + G +L + V G + + +AV
Sbjct: 299 ERVRQRIAPLVTRRGTADRRVTLEIRSAPDGTLLSAVIVQPSGDADW-----DDAVLRAV 353
Query: 244 IKSQAFR 250
+
Sbjct: 354 RAASPLP 360
>gi|218510317|ref|ZP_03508195.1| outer membrane protein [Rhizobium etli Brasil 5]
Length = 31
Score = 44.5 bits (103), Expect = 0.017, Method: Composition-based stats.
Identities = 11/29 (37%), Positives = 13/29 (44%), Gaps = 1/29 (3%)
Query: 244 IKSQAFR-LSPSTYKSWRNITLFFVPSKM 271
+KS F L Y +W L F PS M
Sbjct: 1 MKSAPFTTLPKDKYDAWNEFDLNFDPSSM 29
>gi|196230279|ref|ZP_03129142.1| TonB family protein [Chthoniobacter flavus Ellin428]
gi|196225876|gb|EDY20383.1| TonB family protein [Chthoniobacter flavus Ellin428]
Length = 238
Score = 44.5 bits (103), Expect = 0.017, Method: Composition-based stats.
Identities = 12/118 (10%), Positives = 28/118 (23%)
Query: 4 ENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQ 63
+ L +S +H L L+ ++ R +SV ++ S+ +P
Sbjct: 3 RSALILSCAIHGSVLALVGWSSLFWAPRLDPGRTEISVSLSPGDNALVSEEFPAPQPAQD 62
Query: 64 FKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVS 121
E + + + + R +
Sbjct: 63 TAAEPVETSFAPPAPALEPTPVPMPMAESMPPLIATTAEAPPPLPVFPHAKKERASKT 120
>gi|167765300|ref|ZP_02437413.1| hypothetical protein BACSTE_03688 [Bacteroides stercoris ATCC
43183]
gi|167696928|gb|EDS13507.1| hypothetical protein BACSTE_03688 [Bacteroides stercoris ATCC
43183]
Length = 270
Score = 44.5 bits (103), Expect = 0.017, Method: Composition-based stats.
Identities = 31/229 (13%), Positives = 66/229 (28%), Gaps = 2/229 (0%)
Query: 6 GLAISMILHVMFLLLLYF-NFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQF 64
GLA ++++HV+ + LL F + ++ + ++E +
Sbjct: 11 GLAGALLVHVVVIALLILVGFTLPEQSEEGGVPVMMGETPDAWGAADPSLVEVETMPEEA 70
Query: 65 KGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYD 124
E ++ QE+ + + + K + E K+ S E+A + L
Sbjct: 71 APEMPEEAEQEMLTQEDEETVAIKPKVEEKKKEVKKPEKSAAEKAEEARKLAAEKAERER 130
Query: 125 KQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRN 184
K A + G T + E ++ R+
Sbjct: 131 KAAEEAARKRVAGAFGKGAQMGSKGATEGTGVQGSPTGNSSEGATAGTGGYGTFNLGGRS 190
Query: 185 RVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRR 233
+ + + +V + +N G V+G R
Sbjct: 191 -IGEGGLPRPVYNVQDEGKVVVTITVNPAGQVIGTSINRQTNTVNPALR 238
>gi|227114528|ref|ZP_03828184.1| TonB-like protein [Pectobacterium carotovorum subsp. brasiliensis
PBR1692]
Length = 316
Score = 44.5 bits (103), Expect = 0.018, Method: Composition-based stats.
Identities = 26/244 (10%), Positives = 62/244 (25%), Gaps = 14/244 (5%)
Query: 7 LAISMILHVMFLLLLYFNFNVQLLVP---------ISRREMLSVDNIYNEDYHSSKYKKI 57
+S + H + + +++ + + + M + + + +
Sbjct: 49 FVLSCVAHALLAVFFLLHYSPKENIEDMAGNAGGSMQVTMMAAAMSQAADTSPPVADPPV 108
Query: 58 EEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLR 117
+P V + K+ K E+ KE R
Sbjct: 109 AQPTPVVMPILTPLPEHPNPVIKQPVIERKPVAEKKPPVREKKQPEKKPEEKPKEQLQAR 168
Query: 118 MPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQD 177
+ ++K Q S K + + +
Sbjct: 169 TQRTQQTEKKSESPVATAQTGDAPSPMPSSVGMPGSAATAKAGESDSGQAARGAGKSNSQ 228
Query: 178 AIAIVRNRVIANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLR 236
+ RV N P+ K + +V++ F + G V + +++
Sbjct: 229 NFKALHRRV----NYPARAKALGVEGKVRVKFDITGSGTVTNVQILSETPDGVFGDDVMK 284
Query: 237 ENAR 240
+ AR
Sbjct: 285 DMAR 288
>gi|222106932|ref|YP_002547723.1| tonB protein [Agrobacterium vitis S4]
gi|221738111|gb|ACM39007.1| tonB protein [Agrobacterium vitis S4]
Length = 317
Score = 44.5 bits (103), Expect = 0.018, Method: Composition-based stats.
Identities = 26/173 (15%), Positives = 48/173 (27%), Gaps = 7/173 (4%)
Query: 96 NETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVR 155
E E L + ++ PV D + K K A++++ V
Sbjct: 149 EEQVTKELENVEVPLPVTRPVQKPVETADTTPVKKKQPKATPQPQAQKAQREAQAEVTQS 208
Query: 156 PDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFK-RFKKLRVKMHFQLNQKG 214
+ S + Q A + + PS+ + ++ FQ++ G
Sbjct: 209 DRTAASTTSSGLFSS-SVSPQKWQARLAAYLERRKRYPSEARANKEEGTAYARFQIDDSG 267
Query: 215 FVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPSTYKSWRNITLFFV 267
VL G L + A+ +S P + F
Sbjct: 268 NVLSVSISRSSG-----FPNLDQATVDAIKRSSPVPAPPPGVSKTITVPFRFN 315
>gi|90424403|ref|YP_532773.1| TonB-like [Rhodopseudomonas palustris BisB18]
gi|90106417|gb|ABD88454.1| TonB-like [Rhodopseudomonas palustris BisB18]
Length = 235
Score = 44.5 bits (103), Expect = 0.018, Method: Composition-based stats.
Identities = 15/167 (8%), Positives = 43/167 (25%), Gaps = 8/167 (4%)
Query: 105 KGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSK 164
+ + + + + V S
Sbjct: 73 PRPDPIPIPVTPATQSAAISVPSPTSGQTEAPAAVANQTLAALPTEPPTVSEPAVPSTSP 132
Query: 165 VEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKINVD 223
+ + + + + P + + + V+ F +++ G +LG
Sbjct: 133 PSTTHAPSPATLEFRNALLRHIAQFQRYPRAAEPKRLQGTVRAVFSVSRDGRLLGAWVKT 192
Query: 224 VVGGTELVRRMLRENARKAVIKSQAFRL-SPSTYKSWR-NITLFFVP 268
G +L + A + + ++Q + + + + L F P
Sbjct: 193 SSGEV-----VLDQAAIETLRRAQPLPVIPSALPDPIKIELALGFDP 234
>gi|145638706|ref|ZP_01794315.1| cell envelope integrity inner membrane protein TolA [Haemophilus
influenzae PittII]
gi|145272301|gb|EDK12209.1| cell envelope integrity inner membrane protein TolA [Haemophilus
influenzae PittII]
gi|309750198|gb|ADO80182.1| Outer membrane integrity protein TolA [Haemophilus influenzae
R2866]
Length = 404
Score = 44.5 bits (103), Expect = 0.018, Method: Composition-based stats.
Identities = 13/123 (10%), Positives = 36/123 (29%), Gaps = 12/123 (9%)
Query: 147 KSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKM 206
+ + S +++ + + +F ++
Sbjct: 290 SASKGGNTNKGGTQGSGAALGSGDGGKVGDQYAGVIKKEIQRRFLKDPNFAGK---VCRI 346
Query: 207 HFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSP--STYKSWRNITL 264
QL + G +LG + + A AV +++ +P Y+ +++ +
Sbjct: 347 KIQLGRDGTILGYQKISGSDD-------ICSAALSAVARTKKVPAAPSDEIYEKYKSPII 399
Query: 265 FFV 267
F
Sbjct: 400 DFD 402
Score = 40.7 bits (93), Expect = 0.25, Method: Composition-based stats.
Identities = 16/121 (13%), Positives = 39/121 (32%), Gaps = 1/121 (0%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
AIS++LH + LL + + + E D I + + + Q K
Sbjct: 12 AFAISILLHFILFGLLILSSLYHTVEIMGGGEGEG-DVIGAVIVDTGTAAQEWGRIQQQK 70
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
+ R V E +Q + + ++ + ++ ++ + + +
Sbjct: 71 KGQADKQKRPEPVVEEKPPEPNQEEIKHQQEVQRQEELKRQQEQQRQQEIKKQQEQARQE 130
Query: 126 Q 126
Sbjct: 131 A 131
>gi|264679476|ref|YP_003279383.1| TonB family protein [Comamonas testosteroni CNB-2]
gi|262209989|gb|ACY34087.1| TonB family protein [Comamonas testosteroni CNB-2]
Length = 287
Score = 44.5 bits (103), Expect = 0.018, Method: Composition-based stats.
Identities = 19/118 (16%), Positives = 31/118 (26%), Gaps = 8/118 (6%)
Query: 153 VVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQ 212
+ + SS PS A V RV N P R ++ +
Sbjct: 178 SDQAGSGGSRTGGAGSSASGGPSAGYAAKVAARVKPNIVYPDAVSG--NPRAEVRVRTAP 235
Query: 213 KGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPSTYKSWRNITLFFVPSK 270
G + G E +A+ K+ K ++ + F P
Sbjct: 236 DGTITSATISKSSGNA-----AWDEAVVRALHKTDKLPRDIDG-KVPSDLVIGFRPQD 287
>gi|226943194|ref|YP_002798267.1| TonB protein [Azotobacter vinelandii DJ]
gi|226718121|gb|ACO77292.1| TonB protein [Azotobacter vinelandii DJ]
Length = 280
Score = 44.5 bits (103), Expect = 0.018, Method: Composition-based stats.
Identities = 24/229 (10%), Positives = 58/229 (25%), Gaps = 6/229 (2%)
Query: 18 LLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFS 77
L LY+ + + + VD ++ P + + D
Sbjct: 27 LWSLYWRPESKPIQLAPPPPAMMVDLAPAAAPAAAAAAAAAPPPPTAEPEPEPEAQPDML 86
Query: 78 VQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQD 137
Q ++ + + + KQ+ + +Q
Sbjct: 87 AQAKPIEAPKPKLALPPPKPKQKEKPKPKPKTEAKREQKKPDPKQEQKQEQKQDAEPQQQ 146
Query: 138 LQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFK 197
+ + D + + I+R + P + +
Sbjct: 147 VAQSQAQGNAAAAGASNAADSNAKPAGQMGTPGSSNAMPTWQGILRAHLSRYKRYPPESR 206
Query: 198 RFKK-LRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIK 245
R V + F+++ +G +L V G R L + + + +
Sbjct: 207 RRGDEGTVTLRFKIDGQGRLLSYELVARSG-----RIALDQATLQMIRR 250
>gi|77918068|ref|YP_355883.1| TonB-like protein [Pelobacter carbinolicus DSM 2380]
gi|77544151|gb|ABA87713.1| outer membrane transport energization protein TonB [Pelobacter
carbinolicus DSM 2380]
Length = 289
Score = 44.1 bits (102), Expect = 0.018, Method: Composition-based stats.
Identities = 27/258 (10%), Positives = 60/258 (23%), Gaps = 30/258 (11%)
Query: 7 LAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDN-------IYNEDYHSSKYKKIEE 59
+ +S+ +H+ L L + + +R ++VD N+ +
Sbjct: 11 IILSLGIHITALTL----WPLPPSWEATRPGPIAVDLRYSTQPGGNNQPNKTPGPGTHGP 66
Query: 60 PVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMP 119
+ + + + A + T R S S+ SA + P
Sbjct: 67 KAIMPPKVLHPHPKPAPPHKSSRPITPPAPIKKAAPHRTPRKSQSQKSAPAAISAPEQQP 126
Query: 120 VSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAI 179
+ ++ + D S + +++
Sbjct: 127 EKSLEPPSDQPESDLADTSMENLNGAASATDDTNASHASLSPASGTGTDNTGYGSGENSG 186
Query: 180 AIVRNRVIANWNIPSDFKRFK--------------KLRVKMHFQLNQKGFVLGKINVDVV 225
+ V + ++ G VL
Sbjct: 187 TNGGGGGDGIIRATPLGYGENPPMPYPRSARRRGWEGEVLLKVDVSAHGRVLAVHIEQSS 246
Query: 226 GGTELVRRMLRENARKAV 243
G +L + A AV
Sbjct: 247 G-----YGILDDTALGAV 259
>gi|145630446|ref|ZP_01786227.1| cell envelope integrity inner membrane protein TolA [Haemophilus
influenzae R3021]
gi|144984181|gb|EDJ91618.1| cell envelope integrity inner membrane protein TolA [Haemophilus
influenzae R3021]
Length = 410
Score = 44.1 bits (102), Expect = 0.018, Method: Composition-based stats.
Identities = 13/123 (10%), Positives = 36/123 (29%), Gaps = 12/123 (9%)
Query: 147 KSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKM 206
+ + S +++ + + +F ++
Sbjct: 296 SASKGGNTNKGGTQGSGAALGSGDGGKVGDQYAGVIKKEIQRRFLKDPNFAGK---VCRI 352
Query: 207 HFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSP--STYKSWRNITL 264
QL + G +LG + + A AV +++ +P Y+ +++ +
Sbjct: 353 KIQLGRDGTILGYQKISGSDD-------ICSAALSAVARTKKVPAAPSDEIYEKYKSPII 405
Query: 265 FFV 267
F
Sbjct: 406 DFD 408
Score = 39.5 bits (90), Expect = 0.54, Method: Composition-based stats.
Identities = 15/98 (15%), Positives = 32/98 (32%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
AIS++LH + LL + + + E + ++ Q K
Sbjct: 12 AFAISILLHFILFGLLILSSLYHTVEIMGGGEGEGNAMGAVIVDTGTAAQEWGRIQQQKK 71
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSS 103
G + + + V+E + + H E + +
Sbjct: 72 GQADKQKRPEPVVEEKPPEPNQEEIKHQQEVQRQEELK 109
>gi|225853132|ref|YP_002733365.1| TonB family C-terminal domain-containing protein [Brucella
melitensis ATCC 23457]
gi|256263381|ref|ZP_05465913.1| TonB-dependent receptor [Brucella melitensis bv. 2 str. 63/9]
gi|225641497|gb|ACO01411.1| TonB family C-terminal domain-containing protein [Brucella
melitensis ATCC 23457]
gi|263093378|gb|EEZ17447.1| TonB-dependent receptor [Brucella melitensis bv. 2 str. 63/9]
gi|326409681|gb|ADZ66746.1| TonB family C-terminal domain-containing protein [Brucella
melitensis M28]
gi|326539388|gb|ADZ87603.1| TonB family C-terminal domain-containing protein [Brucella
melitensis M5-90]
Length = 283
Score = 44.1 bits (102), Expect = 0.019, Method: Composition-based stats.
Identities = 23/241 (9%), Positives = 66/241 (27%), Gaps = 15/241 (6%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
L G+ + +++H +++ + + V+ + + + + E
Sbjct: 31 LGAGILV-LLVHAAGAYVIHMA-QEDNQPEGTEVAAMVVELVPDLVAPAEERVSEEVQPE 88
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETK--RSSSSKGEQALKESALLRMPV 120
+E + + Q E + + +
Sbjct: 89 TTTEQPEEVQPEPEPEPQPEAKAEPQQVQEPEEVIPDVVEAQKPEP----------KKVE 138
Query: 121 SPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIA 180
++ + ++ + E + K + E S+ + +
Sbjct: 139 KLKPQKPKPEKVKPKKAEKAAETREASAPRVDADNGAKVAASKRGETSASAGVIWAKWTS 198
Query: 181 IVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENAR 240
+++ + N R + + F ++ G VL G + + L E AR
Sbjct: 199 RLQSHMARNARFLQGKSRNIRGEAHVAFVIDPSGNVLSARIAVSSGDPAVDQLAL-EAAR 257
Query: 241 K 241
+
Sbjct: 258 R 258
>gi|149927206|ref|ZP_01915463.1| hypothetical protein LMED105_07188 [Limnobacter sp. MED105]
gi|149824145|gb|EDM83366.1| hypothetical protein LMED105_07188 [Limnobacter sp. MED105]
Length = 277
Score = 44.1 bits (102), Expect = 0.019, Method: Composition-based stats.
Identities = 27/227 (11%), Positives = 63/227 (27%), Gaps = 21/227 (9%)
Query: 38 MLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENE 97
L V + + + K+ V G + + D+ + + + E
Sbjct: 44 PLEVILVNAQSQKTPTDAKVLAQVALDGGGQADKGRATTLPGQADDKVNQRELIASQERL 103
Query: 98 TKRSSSSKGEQALKESALLRMPVSPY----DKQKISKATNKEQDLQGISFAEKKSIDTVV 153
+ + + + + V D + +++ + +I +
Sbjct: 104 KELEALQRNLAGAELRTTPQNEVLDTRPGNDPKSQRAL-----EIKRLQAQIADNIKSYN 158
Query: 154 VRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIA--NWNIPSDFKRFKKLRVKMHFQLN 211
RP K + + R +V N N P + K ++++ +
Sbjct: 159 ERPRKHFFSPRTSPYAFAI-----YEEAWRAKVEQVGNANYPDELKGRIYGKLRLTAYVR 213
Query: 212 QKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPSTYKS 258
G + G +L A + + S F PS +
Sbjct: 214 ADGTLEDVEVDRSSGSA-----VLDRAALRILRMSTPFPPFPSEMRQ 255
>gi|255262100|ref|ZP_05341442.1| TonB family C- domain protein [Thalassiobium sp. R2A62]
gi|255104435|gb|EET47109.1| TonB family C- domain protein [Thalassiobium sp. R2A62]
Length = 341
Score = 44.1 bits (102), Expect = 0.019, Method: Composition-based stats.
Identities = 17/216 (7%), Positives = 41/216 (18%), Gaps = 11/216 (5%)
Query: 42 DNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFS--DQTKTHATENETK 99
+ + D + + T
Sbjct: 123 SLAPTAAQPLAPADATPVATPSAVSETTPTRPSDQVAPMQPETLEALPDVTVNNVTANTV 182
Query: 100 RSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKK 159
R P + + + Q + T +
Sbjct: 183 RPPDRPANLGQTPPPPPPTPQRTTQRATPAAPSGNAQQDTTRGAQAPAAAPTAQQTTQGQ 242
Query: 160 ELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGK 219
+ + R + V R+ + + + F++ G ++
Sbjct: 243 GQQADQAAIAAARQAVANYPNQVVRRISNVRREGTRARG----VAVVSFRIGGSGQLVAV 298
Query: 220 INVDVVGGTELVRRMLRENARKAVIKSQAFRLSPST 255
G + L A + ++ F PS
Sbjct: 299 SIARSSGNAD-----LDRIAINHIRRAAPFPAPPSG 329
>gi|218780985|ref|YP_002432303.1| TonB family protein [Desulfatibacillum alkenivorans AK-01]
gi|218762369|gb|ACL04835.1| TonB family protein [Desulfatibacillum alkenivorans AK-01]
Length = 142
Score = 44.1 bits (102), Expect = 0.019, Method: Composition-based stats.
Identities = 20/119 (16%), Positives = 42/119 (35%), Gaps = 7/119 (5%)
Query: 151 TVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQL 210
+ K +V ++ + ++ I + + NW +P F + L + F++
Sbjct: 27 EKQQQAAKAFPCKQVYNATLQEDLLREYITEIGTKCKNNWAMPVRFVG-QDLEAIIFFKV 85
Query: 211 NQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAF-RLSPSTYKSWRNITLFFVP 268
+ G + G T+ + KAV KS + K+ + + F P
Sbjct: 86 HPDGSLTDIYFDKRSGSTD-----YDGSVEKAVKKSNPVCPFPENLEKTPIEMAIRFQP 139
>gi|220904780|ref|YP_002480092.1| TonB family protein [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
gi|219869079|gb|ACL49414.1| TonB family protein [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
Length = 316
Score = 44.1 bits (102), Expect = 0.020, Method: Composition-based stats.
Identities = 21/201 (10%), Positives = 49/201 (24%), Gaps = 9/201 (4%)
Query: 45 YNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSS 104
+ V + + + + E + K +
Sbjct: 101 TADRAVEPSAAPPATDTVHAADIDPKRPAAAPAEPVPPVPAAIPVRKIKDEQKAKAKNRK 160
Query: 105 KGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSK 164
++++A + D+++ + + S
Sbjct: 161 AERTVVEKAAPEHARRTLDDREQ---KSGRASAAGREQAGTAGGRGGQGGEKGGAGGKSS 217
Query: 165 VEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKINVD 223
+ + ++ RV KR + V + F + Q G V
Sbjct: 218 AAAAGSSAGYLKGNYEYIKKRVRQYLVYNPQAKRMGIQGMVTVAFTIQQDGRVRDVAVSK 277
Query: 224 VVGGTELVRRMLRENARKAVI 244
G + +L E+A +AV
Sbjct: 278 SSGHS-----LLDESALEAVR 293
>gi|225593169|gb|ACN96086.1| TonB-like protein [Fischerella sp. MV11]
Length = 518
Score = 44.1 bits (102), Expect = 0.020, Method: Composition-based stats.
Identities = 22/171 (12%), Positives = 40/171 (23%), Gaps = 4/171 (2%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
L L S+ LH+ L N ++ E V+ E + E
Sbjct: 27 LTFSLIGSLALHIGVLASGIGNLLSRVPSEEEPIEFTIVEPTTLE----TPEPPEETKKE 82
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
K + V N + QT E + + + V
Sbjct: 83 TPKPEPIDTKTLSAKVSTNSNNTEVQTVPKPVEKQQIPQPAPVQTFKPEPVKEPPKQVIQ 142
Query: 123 YDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRI 173
+ N + + ++LL + S+
Sbjct: 143 QPATTPNSRPNPTIATNTSPAPAPVQNNANQSSENLRQLLRESRNSNSGGG 193
>gi|148264651|ref|YP_001231357.1| hypothetical protein Gura_2607 [Geobacter uraniireducens Rf4]
gi|146398151|gb|ABQ26784.1| hypothetical protein Gura_2607 [Geobacter uraniireducens Rf4]
Length = 244
Score = 44.1 bits (102), Expect = 0.020, Method: Composition-based stats.
Identities = 27/202 (13%), Positives = 61/202 (30%), Gaps = 9/202 (4%)
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
G QE + ++ D + + + Q +S + P D
Sbjct: 45 GRKQEKIASITLIKPPPDVKEKPPEPPPQVQKEIPKETITTPQESPQSPQNQAQDQPQDN 104
Query: 126 QKISKATNKEQDLQGISFA---EKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIV 182
+ + S K ++ +++ +R +Q +
Sbjct: 105 TPAGSDLGVDGEGGAGSDGFGLVGKKGGRGLIGGGNSGGANRLSLLARYGWYTQKVQDEI 164
Query: 183 RNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKA 242
RN+V + + K + + L+Q+G V+ G + + +L A +
Sbjct: 165 RNQVKKRLEREGGYPKGKN-QALVKIFLDQRGTVVKFSITGTSGNERMDKAVL--EAIRL 221
Query: 243 VIKSQAFRLSPSTYKSWRNITL 264
+ S+ P S N+ +
Sbjct: 222 IHISEP---PPEGMPSGMNLKI 240
>gi|260459722|ref|ZP_05807976.1| TonB family protein [Mesorhizobium opportunistum WSM2075]
gi|259034524|gb|EEW35781.1| TonB family protein [Mesorhizobium opportunistum WSM2075]
Length = 340
Score = 44.1 bits (102), Expect = 0.020, Method: Composition-based stats.
Identities = 34/294 (11%), Positives = 76/294 (25%), Gaps = 49/294 (16%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRRE--------------------MLSVDNIY 45
+ IS +LH + + S + ++V +
Sbjct: 37 AIVISGLLHAAVAAAFLISSSGSFDSRDSVQPEGSDRVGDKIAGSALDKDPAAVNVKLVP 96
Query: 46 NEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETK------ 99
+ + + PV K S E + + D ++ +
Sbjct: 97 SPPPAKPEPARAVRPVPPTKPSQPEQETVTHAPEPVRDAAKQASEPSPEPAKQSVATPDI 156
Query: 100 ------------------RSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGI 141
+ + Q ++ + MPV+ D+ I A
Sbjct: 157 LMAATPRPDNQSVAAENMTAKTETPVQPGVQAETVEMPVAVPDQPPIPSARPTPAAAPST 216
Query: 142 SFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKK 201
+ EK+ + K +K + + ++R N ++P + +
Sbjct: 217 TADEKRGTADGRDELAQAASKGKKQKEAGRDAEFSYRSDVIRKLSRVNRSVPPSVQLTAR 276
Query: 202 LRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPST 255
+ F + +G + + G + A V K+ F P
Sbjct: 277 NNAVVTFVIGSRGGIDELRILQSSGSPN-----FDQTALGIVRKAAPFPPIPPQ 325
>gi|226953478|ref|ZP_03823942.1| TonB protein [Acinetobacter sp. ATCC 27244]
gi|226835763|gb|EEH68146.1| TonB protein [Acinetobacter sp. ATCC 27244]
Length = 235
Score = 44.1 bits (102), Expect = 0.021, Method: Composition-based stats.
Identities = 31/264 (11%), Positives = 62/264 (23%), Gaps = 50/264 (18%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
GL + + LH++ +L + ++ P+ + L + I + + E
Sbjct: 18 GLGVVLFLHLVIAYILVTSLTTEMTKPVEKPVELLI--IQDIEPPPPPPPPKPEEKPPEP 75
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
E + + + ++ + K T ++ A+ + +
Sbjct: 76 PKMVEKVAKMPDPPKQVEKVTPVAKPTPTPPVQNTVATPTAAPAVAAPSPSPVAAPVAAP 135
Query: 126 QKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNR 185
K + + S KK +E
Sbjct: 136 APAPKPAGISRGVSEGSAGCKKPDYPREQEMAGEEGT----------------------- 172
Query: 186 VIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIK 245
V+M ++ G V+ G R L A KA
Sbjct: 173 ------------------VRMRLLVDSSGKVIDAKVNKSSG-----VRALDRAATKAYSL 209
Query: 246 SQAFRLSPSTYKS--WRNITLFFV 267
W I F
Sbjct: 210 CSFTPAMKDGVPQQDWYEIEYTFT 233
>gi|86749336|ref|YP_485832.1| TonB-like protein [Rhodopseudomonas palustris HaA2]
gi|86572364|gb|ABD06921.1| TonB-like protein [Rhodopseudomonas palustris HaA2]
Length = 235
Score = 44.1 bits (102), Expect = 0.021, Method: Composition-based stats.
Identities = 15/171 (8%), Positives = 40/171 (23%), Gaps = 6/171 (3%)
Query: 85 FSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFA 144
R + L + P + + + +
Sbjct: 52 PPGPNLRGDENLIEVRLIGPQNAGPLNQERPQAAPAERAQAESPADSPARPLPEVASIPD 111
Query: 145 EKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFK-KLR 203
+ + + + + + + + + P KR + +
Sbjct: 112 PAPAEQVDPAQAPRTRATAPPVSRIAREQKAATFQRTLLSHIARFREYPDAAKRSQTQGV 171
Query: 204 VKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPS 254
V++ F + + G V G +L A + ++Q P
Sbjct: 172 VRLLFAMRRDGSVGRITIRASSGSA-----ILDGAAMATLRRAQPLPRIPD 217
>gi|227113237|ref|ZP_03826893.1| TonB protein [Pectobacterium carotovorum subsp. brasiliensis
PBR1692]
Length = 292
Score = 44.1 bits (102), Expect = 0.021, Method: Composition-based stats.
Identities = 33/224 (14%), Positives = 69/224 (30%), Gaps = 27/224 (12%)
Query: 25 FNVQLLVPISRR---EMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQEN 81
FN P++ + +SV+ + + + +E ++ + + V +
Sbjct: 66 FNSASTPPVTVPARPQPVSVELVAAVAEPVPQPQPVEPEPIEPDVVTPPPELVPPPVDKP 125
Query: 82 GDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGI 141
D + + +++ K E A K+ A+ + P +P K + T
Sbjct: 126 VDDNALLPPVPEKKEPERKAPEKKPEPAPKKVAVKKNPPAPTPKSQ--AETASATAPITP 183
Query: 142 SFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKK 201
+ +K++ V P L + + AI R +
Sbjct: 184 APVAQKAVAQPVDAPLTPPLANADYLHNPAPSYPDVAI-----------------SRGYE 226
Query: 202 LRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIK 245
V ++ Q+ G V G L + AR V +
Sbjct: 227 GTVLLNVQVRADGKVQTIRIHQSSG-----YPSLDDAARDTVRR 265
>gi|307635118|gb|ADI85735.2| TonB-related periplasmic protein, putative [Geobacter
sulfurreducens KN400]
Length = 289
Score = 44.1 bits (102), Expect = 0.021, Method: Composition-based stats.
Identities = 26/254 (10%), Positives = 60/254 (23%), Gaps = 15/254 (5%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
L +S + + + ++ V+ S + P +
Sbjct: 30 LARAFLLSGV--AHVAAAVCVMMPAGGGTRLPPANIIVVEL-----GGSVLSAEKPVPAL 82
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
+ D + A + R+ + A + V+P
Sbjct: 83 LPLPQPSPVRRPPLPLPVKPSPVRDSSPPVALSPPSGRTQPTAPAIAPLAADPAG-AVAP 141
Query: 123 YDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIV 182
+ + + A V E + ++ +++
Sbjct: 142 SPSAMMVPVAPPQPVQAAVPQARGDGPQVTVPTVRSPEPPAASTGAADAGRIRVGYQSVL 201
Query: 183 RNRVIANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARK 241
R + P +R + + + L + G V +L A +
Sbjct: 202 RGLIERCKEYPPLARRGRMEGTAVVRVVLARSGAVRRDEVARSSSHA-----LLDNAALR 256
Query: 242 AVIKSQAFR-LSPS 254
AV F + P
Sbjct: 257 AVRTVGRFPAVPPE 270
>gi|254419527|ref|ZP_05033251.1| TonB family C-terminal domain protein [Brevundimonas sp. BAL3]
gi|196185704|gb|EDX80680.1| TonB family C-terminal domain protein [Brevundimonas sp. BAL3]
Length = 245
Score = 44.1 bits (102), Expect = 0.021, Method: Composition-based stats.
Identities = 22/184 (11%), Positives = 49/184 (26%), Gaps = 6/184 (3%)
Query: 71 NLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISK 130
+ V + + + S ++A R P ++
Sbjct: 47 HFVVPAPMPLEEPPVIVVALVRSNAAPPRPPSEQVDGPKQIQAASSRPLPRPPVPLRVHA 106
Query: 131 ATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANW 190
+ + + + + S QD A + + +
Sbjct: 107 EAPEAVAIPVAPPVPRAAERQTPAPATTAPVSRPAPPSPSASTAPQDWKARLLAHLDSKK 166
Query: 191 NIPSDFKR-FKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAF 249
P +R ++ V + F +++ G VL G R +L A + ++Q
Sbjct: 167 RYPPGAQRLRQEGVVHVRFTMDRAGRVLASRIERSSG-----RALLDREALAMLARAQPL 221
Query: 250 RLSP 253
P
Sbjct: 222 PAPP 225
>gi|167516690|ref|XP_001742686.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163779310|gb|EDQ92924.1| predicted protein [Monosiga brevicollis MX1]
Length = 1268
Score = 44.1 bits (102), Expect = 0.022, Method: Composition-based stats.
Identities = 12/143 (8%), Positives = 28/143 (19%), Gaps = 9/143 (6%)
Query: 24 NFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEE-----PVVQFKGSSQENLVRDFSV 78
+ L E + V N ++ + P + +
Sbjct: 1060 SLPPTLPSSKPVPEAVPVANGAVAARIAAFSAPEPQPLARNPAPVAAARPRPAERPSVPI 1119
Query: 79 QENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQ----KISKATNK 134
+ + A + + S+ + L P P K +
Sbjct: 1120 KPINTGKPTPPQRPALPAKPQGQFQSQKPALPNKPNLTSKPALPTKPNLASSKPALPAKP 1179
Query: 135 EQDLQGISFAEKKSIDTVVVRPD 157
+ A+
Sbjct: 1180 ALPAKPTLAAKPSVRLMQTTLRK 1202
>gi|209967075|ref|YP_002299990.1| protein TonB [Rhodospirillum centenum SW]
gi|209960541|gb|ACJ01178.1| protein TonB [Rhodospirillum centenum SW]
Length = 268
Score = 44.1 bits (102), Expect = 0.022, Method: Composition-based stats.
Identities = 24/248 (9%), Positives = 67/248 (27%), Gaps = 21/248 (8%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPV 61
R A+++ H++ +L P + ++ +
Sbjct: 15 RWGRAFALALGAHLLPGAVLVGWLGPVAAPPAPPPAGIMLELAPLPSAPAVTPSDAAPAP 74
Query: 62 VQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVS 121
+ + + E + + +K +
Sbjct: 75 PAVEAPP---------------PPPEPVEEPTPEPDPVPVPKPRERPVVKPLPVRPKAEV 119
Query: 122 PYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAI 181
+ + + + +EQ + + D+ + S++ Q +
Sbjct: 120 ALPRAEAAPSRPREQAEARTPASASSAPPAAAQVSDRTAAPAVGASSAQTSSSVQTWQSR 179
Query: 182 VRNRVIANWNIPSDFKR-FKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENAR 240
+ + + PS +R ++ + F ++++G +L G L E A
Sbjct: 180 LFAHLERHKRYPSRARRLRQEGVPMVRFAMDREGRLLSVRLEHPCG-----VDSLDEEAL 234
Query: 241 KAVIKSQA 248
V ++Q
Sbjct: 235 ALVDRAQP 242
>gi|115471661|ref|NP_001059429.1| Os07g0405100 [Oryza sativa Japonica Group]
gi|113610965|dbj|BAF21343.1| Os07g0405100 [Oryza sativa Japonica Group]
gi|215767231|dbj|BAG99459.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 555
Score = 44.1 bits (102), Expect = 0.022, Method: Composition-based stats.
Identities = 21/220 (9%), Positives = 54/220 (24%), Gaps = 15/220 (6%)
Query: 10 SMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIY--------------NEDYHSSKYK 55
S +H F L + + + + N++ + +
Sbjct: 20 SGFIHAAFTLGYEAGIHKGGIDGNLVPPGALITIVQKGLQYIELEANTDENDEDLAKDFA 79
Query: 56 KIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESAL 115
+E + K + + +E D+ K E + GE+ +
Sbjct: 80 LLEPLEIITKNVEELQQIVKKRKREKTQSDRDKDKGKEKERMEEHERRPGGERERERHDQ 139
Query: 116 LRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPS 175
+ D+ + + +KE++ +K + + + +
Sbjct: 140 EKELEKEKDRAERDRDQDKEKEKLHTERIDKVKAEEDSLAGGGPTPMDVSTTAHEISSAD 199
Query: 176 QDAIAIVRNRVIAN-WNIPSDFKRFKKLRVKMHFQLNQKG 214
+ + V A W+ G
Sbjct: 200 VTVLEGHSSEVFACAWSPAGSLLASGSGDSTARIWTIPDG 239
>gi|145628742|ref|ZP_01784542.1| cell envelope integrity inner membrane protein TolA [Haemophilus
influenzae 22.1-21]
gi|144979212|gb|EDJ88898.1| cell envelope integrity inner membrane protein TolA [Haemophilus
influenzae 22.1-21]
Length = 315
Score = 44.1 bits (102), Expect = 0.022, Method: Composition-based stats.
Identities = 13/123 (10%), Positives = 36/123 (29%), Gaps = 12/123 (9%)
Query: 147 KSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKM 206
+ + S +++ + + +F ++
Sbjct: 201 SASKGGNTNKGGTQGSGAALGSGDGGKVGDQYAGVIKKEIQRRFLKDPNFAGK---VCRI 257
Query: 207 HFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSP--STYKSWRNITL 264
QL + G +LG + + A AV +++ +P Y+ +++ +
Sbjct: 258 KIQLGRDGTILGYQKISGSDD-------ICSAALSAVARTKKVPAAPSDEIYEKYKSPII 310
Query: 265 FFV 267
F
Sbjct: 311 DFD 313
>gi|167042798|gb|ABZ07516.1| putative gram-negative bacterial tonB protein [uncultured marine
microorganism HF4000_ANIW137I15]
Length = 159
Score = 44.1 bits (102), Expect = 0.023, Method: Composition-based stats.
Identities = 16/136 (11%), Positives = 46/136 (33%), Gaps = 6/136 (4%)
Query: 119 PVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDA 178
++P K + SK + L + + + + + +++ + + +
Sbjct: 11 RLAPKAKNRRSKPKTATELLSLLRTDPDGAAASPRKKNPRSRKKARLAPLLTQDVRYRGY 70
Query: 179 IAIVRNRV-IANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRE 237
+ ++ + + + +V + F++ + G + + G + E
Sbjct: 71 RYAIWKKIDERLYFPEAAATGKVRGKVVVRFEVTRDGRLATLKLLQSSG-----FSLFDE 125
Query: 238 NARKAVIKSQAFRLSP 253
A A+ KS F P
Sbjct: 126 EALMAIRKSAPFPKFP 141
>gi|239832738|ref|ZP_04681067.1| TonB family C-terminal domain-containing protein [Ochrobactrum
intermedium LMG 3301]
gi|239825005|gb|EEQ96573.1| TonB family C-terminal domain-containing protein [Ochrobactrum
intermedium LMG 3301]
Length = 323
Score = 44.1 bits (102), Expect = 0.023, Method: Composition-based stats.
Identities = 27/232 (11%), Positives = 59/232 (25%), Gaps = 18/232 (7%)
Query: 28 QLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP-----------VVQFKGSSQENLVRDF 76
P + E + E + + + + E
Sbjct: 69 LAPEPEAPMEEQVAEEAQPETAEAPQELAEPAQQPEPVQEEPTPPEPEEATPPEPAPEPQ 128
Query: 77 SVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQ 136
+VQE + D + E + + P + K +
Sbjct: 129 AVQEPEEVVPDVVEAEKPEVAVPMPVEKPEVKPEPKPEPKPEPKKVEKPKPEKPKPPKAE 188
Query: 137 DLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRI------PSQDAIAIVRNRVIANW 190
+ + + ++ + R S + +++ + N
Sbjct: 189 KPKPKKAEKAPETRQAAAPQMDADNGARAAANRRGENSASAGVSSAKWTSKLQSHMARNV 248
Query: 191 NIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKA 242
R K V++ F ++ G VL G ++ + L E AR+A
Sbjct: 249 RFLQRKSRNAKGLVQVTFVIDPSGNVLSARLAGSSGNPDVDQLAL-EAARRA 299
>gi|226942086|ref|YP_002797160.1| hypothetical protein LHK_03173 [Laribacter hongkongensis HLHK9]
gi|226717013|gb|ACO76151.1| hypothetical protein LHK_03173 [Laribacter hongkongensis HLHK9]
Length = 345
Score = 44.1 bits (102), Expect = 0.023, Method: Composition-based stats.
Identities = 26/240 (10%), Positives = 59/240 (24%), Gaps = 12/240 (5%)
Query: 25 FNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDR 84
VP + + + + ++ E + +
Sbjct: 51 MTRMRAVPEPVAPSRP-EPVPEAESVPLPEVAKPDIALKKPEPKPEKKPEPKPEPKPEPK 109
Query: 85 FSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGI--- 141
+ + ++ + K A +P P K + + L +
Sbjct: 110 PEKKPEKKPEPEPRAEPKKTEKKADSKPVAKNDVPAKPASKNARPGDFDVDDALADLGST 169
Query: 142 -SFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFK 200
+ S T D + + ++V +RV +PSD
Sbjct: 170 NTRIPPNSTRTQAGSKDGVPNGVAGGVGAGSGNGGKGYESLVISRVRPLVQVPSDLAG-- 227
Query: 201 KLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPSTYKSWR 260
+ L V + G + E ++AV+ Q ++ +R
Sbjct: 228 NPTAVVRVTLLPSLEVREVKLLQSSGNAQ-----YDEAVQRAVLAGQDVSCPAVGHEVFR 282
>gi|303248656|ref|ZP_07334910.1| protein TolA [Desulfovibrio fructosovorans JJ]
gi|302489912|gb|EFL49838.1| protein TolA [Desulfovibrio fructosovorans JJ]
Length = 415
Score = 43.7 bits (101), Expect = 0.024, Method: Composition-based stats.
Identities = 15/139 (10%), Positives = 40/139 (28%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
G S+ LH+ +L N++ + + VD + + P +
Sbjct: 5 GWIFSIFLHLTVVLASLVFINIEPVKFQLNVPVYEVDLVSLGAPGLPPGEPGLPPGPKGP 64
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
G + + + + E + ++ + A+ ++ P +
Sbjct: 65 GDRPQPGPPEPEGGPGDAAEAQVPEPAKAPAEPAKPTAPEPVAAVPQAPEPETKSEPKTE 124
Query: 126 QKISKATNKEQDLQGISFA 144
K + D + +
Sbjct: 125 PKPEPKIEPKPDFKKLEEE 143
>gi|94501658|ref|ZP_01308174.1| hypothetical protein RED65_07354 [Oceanobacter sp. RED65]
gi|94426234|gb|EAT11226.1| hypothetical protein RED65_07354 [Oceanobacter sp. RED65]
Length = 498
Score = 43.7 bits (101), Expect = 0.024, Method: Composition-based stats.
Identities = 26/166 (15%), Positives = 48/166 (28%), Gaps = 8/166 (4%)
Query: 91 THATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSID 150
A + + + E V P+ + + F
Sbjct: 321 RQAEIKKLDAQDQGASDLLVNELKRATTEVVPFLLPPDALEGKQWDISISYRFDPNSDDQ 380
Query: 151 TVVVRPDKKELLSKVEK--SSRKRIPSQDAIAIVRNRVIANWNIPSDFKR-FKKLRVKMH 207
V +P E L +K SS+ + + VR + P KR +K +V
Sbjct: 381 PYVAKPSLPESLQSDKKLSSSQYKKVLGSYLGTVRAIIEEGIEYPEWSKRLNQKGKVVFE 440
Query: 208 FQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSP 253
+NQ G + ++ L + A+ +Q + P
Sbjct: 441 ITINQDGIITETKAIESSR-----HEALNQAVLDAINIAQPLPIIP 481
>gi|311696777|gb|ADP99650.1| energy transducer TonB, C-terminal region [marine bacterium HP15]
Length = 246
Score = 43.7 bits (101), Expect = 0.024, Method: Composition-based stats.
Identities = 18/215 (8%), Positives = 65/215 (30%), Gaps = 9/215 (4%)
Query: 41 VDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKR 100
V ++ + + + E V + + L + + + + + K
Sbjct: 22 VALVFATPEKTVELNTLGESAVNTAPAIRIKLAGEPAPTLEPVTAPEPKPQPKPKPKPKP 81
Query: 101 SSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKE 160
+ E + P + + + + ++T + +
Sbjct: 82 EPEPEPEPDPEPEPEPEPEPEPEPVTQPTPEPEVTEQVTEAETPVGDPVETETLEQSQAT 141
Query: 161 LLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKR-FKKLRVKMHFQLNQKGFVLGK 219
+ +++ R + ++ + + + P +R ++ + F+ + G ++
Sbjct: 142 V---PLQNAGVRSEVDNYLSRLSRHLAGYYEYPRRARRLGQEGTPVIVFEFRRDGSLVAH 198
Query: 220 INVDVVGGTELVRRMLRENARKAVIKSQAFRLSPS 254
G ++L E+A + +++ P
Sbjct: 199 SLRTSSG-----YQLLDESALAMLEQAEPLPAVPD 228
>gi|257452639|ref|ZP_05617938.1| TonB protein [Fusobacterium sp. 3_1_5R]
Length = 245
Score = 43.7 bits (101), Expect = 0.024, Method: Composition-based stats.
Identities = 24/245 (9%), Positives = 70/245 (28%), Gaps = 28/245 (11%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVD-NIYNEDYHSSKYKKIEEPV 61
++ L +S +H++ + Y + + + +++SV + N +
Sbjct: 1 MKKYLVLSFCIHMLCFIGFYHHEMHKGEEKLPLNQVISVSFVVENPPPSDNPGSPNVADK 60
Query: 62 VQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVS 121
+ K + K + K + ++ +S +
Sbjct: 61 ILEKKENS-----------------TNEKPKEQPKKEKPKKEEQVKEKTFDSKMATKDAK 103
Query: 122 PYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAI 181
K++ + + + + + D + + + +
Sbjct: 104 EVKKEESAAVASDSHEKESSDSGKGSGSDNPFYGSNFQANGDGSYTALSSEGIN----YQ 159
Query: 182 VRNRVIANW-NIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENAR 240
+ N V ++ + +++ VK+ F + KG V + +
Sbjct: 160 ILNEVEPDYPSQAESIGYDQRVSVKVKFLVGLKGNVENIQIIKSHKKLG-----FDDEVM 214
Query: 241 KAVIK 245
KA+ K
Sbjct: 215 KAIKK 219
>gi|257092804|ref|YP_003166445.1| hypothetical protein CAP2UW1_1187 [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
gi|257045328|gb|ACV34516.1| conserved hypothetical protein [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
Length = 297
Score = 43.7 bits (101), Expect = 0.024, Method: Composition-based stats.
Identities = 20/251 (7%), Positives = 59/251 (23%), Gaps = 16/251 (6%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
+A S+++H + L + + + + P +
Sbjct: 28 AVAASLVVHAVVLF---------APQKEPPPLLSASSRFEASLSARPQAEAPPAPARPPE 78
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
++ R + + + + + E + +
Sbjct: 79 KAAPTPKAPTRPTVAPPARQPPRARVLTAPKSAAPAVAETPRWSAAEKQEMNRFLDELAA 138
Query: 126 QKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNR 185
+ + + L + + + V R
Sbjct: 139 EAKAAPKPSLAQRSLAMARDISRQQARQDEEGSALLERRPNTPPPEPFSLDLYVDGVVKR 198
Query: 186 VIANWNIPSDFKRFKKLR-VKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVI 244
+ + + R + L+ + F++N G + + G + + V
Sbjct: 199 LNRSAAFVRNDPRSRGLKTASVQFRINPDGSLKSFKVI--NAGDQEEEIAFIRSV---VE 253
Query: 245 KSQAF-RLSPS 254
++ F R P
Sbjct: 254 RAIPFARFPPD 264
>gi|75908455|ref|YP_322751.1| hypothetical protein Ava_2238 [Anabaena variabilis ATCC 29413]
gi|75702180|gb|ABA21856.1| conserved hypothetical protein [Anabaena variabilis ATCC 29413]
Length = 406
Score = 43.7 bits (101), Expect = 0.024, Method: Composition-based stats.
Identities = 20/172 (11%), Positives = 52/172 (30%)
Query: 10 SMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQ 69
S LH++ L+ + V L P + ++ ++ I +S K P Q ++
Sbjct: 33 SASLHLLAFWLIRSSSTVGLWFPQQDQSVVPIELIEVTPQTNSTDKPASSPPEQSVSNTT 92
Query: 70 ENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKIS 129
S ++ + + ++ N S + QA + ++ + +
Sbjct: 93 TAQAPPTSTNQDAEIITSGEQSQPDRNNLAPSKTEVFSQAESTTTPIQTTEPEPTPTQTT 152
Query: 130 KATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAI 181
+ K + + + + K + + S+
Sbjct: 153 QPEPKPTPTVPVGELPWNRREEIELGQGKPLPSDIPPVTPEQVQQSETVEDK 204
>gi|89899955|ref|YP_522426.1| TonB-like protein [Rhodoferax ferrireducens T118]
gi|89344692|gb|ABD68895.1| TonB-like [Rhodoferax ferrireducens T118]
Length = 337
Score = 43.7 bits (101), Expect = 0.024, Method: Composition-based stats.
Identities = 23/203 (11%), Positives = 65/203 (32%), Gaps = 7/203 (3%)
Query: 48 DYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGE 107
+ + + Q + ++ +Q R D+ ++ E K+++ K +
Sbjct: 123 ELKKQQALDKQRLEKQRLDQLKREELKQEKLQLEKKRLQDKRESDKKAAEDKKAAEDKKK 182
Query: 108 QALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEK 167
A + + + +A ++D + ++ K +I+ + +
Sbjct: 183 AAEDKKKAAEDKKKAAQEAQRKEAIQAQEDAKKLAAQRKANIERMTGLAGASGAPTARGT 242
Query: 168 SSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGG 227
+ PS +R R+ N D ++ + + G ++ + G
Sbjct: 243 QLQSSGPSGSYAGRIRTRIKPNIVFADDISG--NPAAEVEVRTSPDGTIISRKLTKPSG- 299
Query: 228 TELVRRMLRENARKAVIKSQAFR 250
+ E +A+ K++
Sbjct: 300 ----VKSWDEAVLRAIDKTEVLP 318
>gi|283457358|ref|YP_003361934.1| hypothetical protein RMDY18_02820 [Rothia mucilaginosa DY-18]
gi|283133349|dbj|BAI64114.1| protein containing Glucan-binding domain [Rothia mucilaginosa
DY-18]
Length = 351
Score = 43.7 bits (101), Expect = 0.025, Method: Composition-based stats.
Identities = 11/149 (7%), Positives = 36/149 (24%)
Query: 13 LHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENL 72
+H Q + S + + + +D + K ++ +
Sbjct: 96 IHADAAGNFSVTIPWQAELHGSVSVDIYLLSGSLKDGDVPRGGKAATVTIKVAEQPAPSE 155
Query: 73 VRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKAT 132
+ E+ + T ++ + + + A + D ++ A
Sbjct: 156 APTPAPTEDPTPAPSENPTPTPSEDSTPAPTQDPTTEAPKPADETSAPAVEDAKETKPAE 215
Query: 133 NKEQDLQGISFAEKKSIDTVVVRPDKKEL 161
+ + + K +
Sbjct: 216 ETSAPAEEQKSDQASDSSAKDEKAYKYQN 244
>gi|319781143|ref|YP_004140619.1| hypothetical protein Mesci_1409 [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317167031|gb|ADV10569.1| hypothetical protein Mesci_1409 [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 122
Score = 43.7 bits (101), Expect = 0.025, Method: Composition-based stats.
Identities = 12/87 (13%), Positives = 25/87 (28%), Gaps = 5/87 (5%)
Query: 170 RKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVG--G 227
+ + V + A W P+ V + F + G ++G + G
Sbjct: 21 ASSAAELNTMDDVGAAIQACWTPPAGAGTA---SVTLSFSFKRDGTLIGPPRPTAIKVEG 77
Query: 228 TELVRRMLRENARKAVIKSQAFRLSPS 254
++ + A A+ S
Sbjct: 78 DAKAKKSFVDAATTALQNCLPLTFSAK 104
>gi|218507980|ref|ZP_03505858.1| outer membrane protein [Rhizobium etli Brasil 5]
Length = 306
Score = 43.7 bits (101), Expect = 0.025, Method: Composition-based stats.
Identities = 25/180 (13%), Positives = 56/180 (31%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
++ + S +LH + L + + + E + VD + E + + P
Sbjct: 1 MKTSVVTSAVLHCLVLTWAMVSLSAPESFKVEDFEAMPVDLVPVESITQLQQGDKKAPKK 60
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
+ EN + KT N +S + + ++ P
Sbjct: 61 ETSAPVPTTRPPIAQPAENAGDNNVDLKTPPVPNAKPSNSEAAAANSSEKPLPQVDPKPN 120
Query: 123 YDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIV 182
K+ + T EQ + S K ++ +P +K + + + ++ V
Sbjct: 121 DVKEVNKEETEVEQPKEVASIPPPKPVEVTPPKPQEKPPEEQAKPEEPPKPDAEALPDKV 180
>gi|187923065|ref|YP_001894707.1| TonB family protein [Burkholderia phytofirmans PsJN]
gi|187714259|gb|ACD15483.1| TonB family protein [Burkholderia phytofirmans PsJN]
Length = 180
Score = 43.7 bits (101), Expect = 0.025, Method: Composition-based stats.
Identities = 16/106 (15%), Positives = 30/106 (28%), Gaps = 20/106 (18%)
Query: 168 SSRKRIPSQDAIAIVRNRV-IANWNIPSDFKRFKKLR--VKMHFQLNQKGFVLGKINVDV 224
++ V R+ N + LR V + F ++ G VL
Sbjct: 59 AAINSATLDQYRDAVARRILERNPSYVLRGTPQAMLRSLVVVSFTVDSNGRVLESSVYRT 118
Query: 225 VGGTELVRRMLREN-ARKAVIKSQAFRLSPST----------YKSW 259
G E E+ A ++ ++ P ++ W
Sbjct: 119 NGDDE------AESTALASLRRAAPLPQPPGKLLNGRGQLELFEDW 158
>gi|167635648|ref|ZP_02393959.1| putative internalin [Bacillus anthracis str. A0442]
gi|170688531|ref|ZP_02879738.1| putative internalin [Bacillus anthracis str. A0465]
gi|254684370|ref|ZP_05148230.1| internalin protein [Bacillus anthracis str. CNEVA-9066]
gi|254743781|ref|ZP_05201465.1| internalin protein [Bacillus anthracis str. Kruger B]
gi|167528907|gb|EDR91663.1| putative internalin [Bacillus anthracis str. A0442]
gi|170667556|gb|EDT18312.1| putative internalin [Bacillus anthracis str. A0465]
Length = 1067
Score = 43.7 bits (101), Expect = 0.025, Method: Composition-based stats.
Identities = 18/135 (13%), Positives = 32/135 (23%), Gaps = 1/135 (0%)
Query: 47 EDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKG 106
K + + + E + + T+ K
Sbjct: 863 SKEEPIKEAEGSKEEPKEPAKEVEGSKEEPKEPAKEVEGPKEEVKEPTKEVEGPKEEVKE 922
Query: 107 EQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVE 166
E + P + + SK K + E+ T V K+ E
Sbjct: 923 PTKEVEGPKEEVK-EPMKEVEGSKEEVKGPTKEAEGSKEEVKEPTTEVEGSKEVKEPGKE 981
Query: 167 KSSRKRIPSQDAIAI 181
K +Q A+A
Sbjct: 982 VEGSKDAINQSAVAQ 996
>gi|157374995|ref|YP_001473595.1| TolA family protein [Shewanella sediminis HAW-EB3]
gi|157317369|gb|ABV36467.1| TolA family protein [Shewanella sediminis HAW-EB3]
Length = 319
Score = 43.7 bits (101), Expect = 0.026, Method: Composition-based stats.
Identities = 36/322 (11%), Positives = 85/322 (26%), Gaps = 64/322 (19%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPV 61
L IS +H+ L++L + + D
Sbjct: 6 NFTLPLVISAGIHIGVLVILALGVDFSEPPKPQPQASAPAVQAVVVDQKKVAQHVERLKA 65
Query: 62 VQFKGSSQENLVRD----FSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLR 117
+ + +E +D + + +R +Q + E + K+ A A
Sbjct: 66 EKRETERKEKARQDDLELKAKEARQEREREQAQIKKLEKQRKQKEIETKNAAAAAKAAQL 125
Query: 118 MPVSPYDKQKISKATNKEQDLQGIS----------------------FAEKKSIDTVVVR 155
DK + ++A K+++ + + E+K + +
Sbjct: 126 KEKQAKDKAQKAEADRKQKEKERKASEVAAKKAAEKRKQEEAAAKKAADERKRKEEAERK 185
Query: 156 PDKKELLS--------------------------KVEKSSRKRIPSQDAIAIVRNRVIAN 189
+ ++ + Q +++R + N
Sbjct: 186 RKAEAERKRKAEEQARQQQEQMMQDALAAEQAALSQTRNKQVMTEVQRYTSMIRATIQRN 245
Query: 190 WNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAF 249
+ + ++ +L GFV + ++ + A+ K+
Sbjct: 246 LVVDESMRGK---SCRIFIRLANDGFVTANKIL-------SGDPVVCRATKTAINKAGRL 295
Query: 250 RLS--PSTYKSWRNITLFFVPS 269
+S P Y + I L P
Sbjct: 296 PVSSEPDVYNKLKEINLTVQPE 317
>gi|68248986|ref|YP_248098.1| cell envelope integrity inner membrane protein TolA [Haemophilus
influenzae 86-028NP]
gi|68057185|gb|AAX87438.1| TolA [Haemophilus influenzae 86-028NP]
Length = 408
Score = 43.7 bits (101), Expect = 0.026, Method: Composition-based stats.
Identities = 19/138 (13%), Positives = 45/138 (32%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
AIS++LH + LL + + + E + ++ Q K
Sbjct: 12 AFAISILLHFILFGLLILSSLYHTVEIMGGGEGEGDVIGAVIVDTGTAAQEWGRIQQQKK 71
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
G + + + V+E + + H E + + + E +E + +
Sbjct: 72 GQADKQKRPEPVVEEKPPEPNQEEIKHQQEVQRQEEIKHQQEVQRQEELKRQQEQQRQQE 131
Query: 126 QKISKATNKEQDLQGISF 143
K + +++ L+
Sbjct: 132 IKKQQEQARQEALEKQKQ 149
Score = 42.2 bits (97), Expect = 0.077, Method: Composition-based stats.
Identities = 13/123 (10%), Positives = 36/123 (29%), Gaps = 12/123 (9%)
Query: 147 KSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKM 206
+ + S +++ + + +F ++
Sbjct: 294 SASKGGNTNKGGTQGSGAALGSGDGGKVGDQYAGVIKKEIQRRFLKDPNFAGK---VCRI 350
Query: 207 HFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSP--STYKSWRNITL 264
QL + G +LG + + A AV +++ +P Y+ +++ +
Sbjct: 351 KIQLGRDGTILGYQKISGSDD-------ICSAALSAVARTKKVPAAPSDEIYEKYKSPII 403
Query: 265 FFV 267
F
Sbjct: 404 DFD 406
>gi|229844454|ref|ZP_04464594.1| cell envelope integrity inner membrane protein TolA [Haemophilus
influenzae 6P18H1]
gi|229812703|gb|EEP48392.1| cell envelope integrity inner membrane protein TolA [Haemophilus
influenzae 6P18H1]
Length = 398
Score = 43.7 bits (101), Expect = 0.027, Method: Composition-based stats.
Identities = 13/123 (10%), Positives = 36/123 (29%), Gaps = 12/123 (9%)
Query: 147 KSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKM 206
+ + S +++ + + +F ++
Sbjct: 284 SASKGGNTNKGGTQGSGAALGSGDGGKVGDQYAGVIKKEIQRRFLKDPNFAGK---VCRI 340
Query: 207 HFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSP--STYKSWRNITL 264
QL + G +LG + + A AV +++ +P Y+ +++ +
Sbjct: 341 KIQLGRDGTILGYQKISGSDD-------ICSAALSAVARTKKVPAAPSDEIYEKYKSPII 393
Query: 265 FFV 267
F
Sbjct: 394 DFD 396
Score = 43.4 bits (100), Expect = 0.033, Method: Composition-based stats.
Identities = 18/126 (14%), Positives = 39/126 (30%), Gaps = 5/126 (3%)
Query: 6 GLAISMILHVMFLLLLYFN-----FNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP 60
AIS++LH + LL + + + +V + ++
Sbjct: 12 AFAISILLHFILFGLLILSSLYHTVEIMGGGEGEGDVIGAVIVDTGTAAQEWGRIQQQKK 71
Query: 61 VVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPV 120
K E +V + + N + Q + E ++ + ++ K+ R
Sbjct: 72 GQSDKQKRPEPVVEEKPPEPNQEEIKHQQEVQRQEELKRQQEQQRQQEIKKQQEQARQEA 131
Query: 121 SPYDKQ 126
KQ
Sbjct: 132 LEKQKQ 137
>gi|145636349|ref|ZP_01792018.1| cell envelope integrity inner membrane protein TolA [Haemophilus
influenzae PittHH]
gi|145270514|gb|EDK10448.1| cell envelope integrity inner membrane protein TolA [Haemophilus
influenzae PittHH]
Length = 404
Score = 43.7 bits (101), Expect = 0.027, Method: Composition-based stats.
Identities = 13/123 (10%), Positives = 36/123 (29%), Gaps = 12/123 (9%)
Query: 147 KSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKM 206
+ + S +++ + + +F ++
Sbjct: 290 SASKGGNTNKGGTQGSGAALGSGDGGKVGDQYAGVIKKEIQRRFLKDPNFAGK---VCRI 346
Query: 207 HFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSP--STYKSWRNITL 264
QL + G +LG + + A AV +++ +P Y+ +++ +
Sbjct: 347 KIQLGRDGTILGYQKISGSDD-------ICSAALSAVARTKKVPAAPSDEIYEKYKSPII 399
Query: 265 FFV 267
F
Sbjct: 400 DFD 402
Score = 43.0 bits (99), Expect = 0.049, Method: Composition-based stats.
Identities = 21/132 (15%), Positives = 46/132 (34%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
AIS++LH + LL + + + E + ++ Q K
Sbjct: 12 AFAISILLHFILFGLLILSSLYHTVEIMGGGEGEGDVIGAVIVDTGTAAQEWGRIQQQKK 71
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
G S + + V+E + + H E + + + EQ ++ + + +
Sbjct: 72 GQSDKQKRPEPVVEEKPPEPNQEEIKHQQEVQRQEELKRQQEQQRQQEQQRQQEIKKQQE 131
Query: 126 QKISKATNKEQD 137
Q +A K++
Sbjct: 132 QARQEALEKQKQ 143
>gi|332286927|ref|YP_004418838.1| hypothetical protein PT7_3674 [Pusillimonas sp. T7-7]
gi|330430880|gb|AEC22214.1| hypothetical protein PT7_3674 [Pusillimonas sp. T7-7]
Length = 417
Score = 43.7 bits (101), Expect = 0.027, Method: Composition-based stats.
Identities = 16/97 (16%), Positives = 22/97 (22%), Gaps = 6/97 (6%)
Query: 160 ELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIP-SDFKRFKKLRVKMHFQLNQKGFVLG 218
+ + A VR V + V+ QLN G V G
Sbjct: 312 PGGTSDRNQAGGGGGDGGYAAKVRACVRPRVIYNVPPRQGSANPTVQYRAQLNSDGTVKG 371
Query: 219 KINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPST 255
G +K + F PS
Sbjct: 372 VSVRRSSGNPR-----FDAAVQKGIQACSPFPKPPSG 403
>gi|330809802|ref|YP_004354264.1| TonB protein [Pseudomonas brassicacearum subsp. brassicacearum
NFM421]
gi|327377910|gb|AEA69260.1| putative TonB protein [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
Length = 269
Score = 43.7 bits (101), Expect = 0.028, Method: Composition-based stats.
Identities = 18/216 (8%), Positives = 59/216 (27%), Gaps = 17/216 (7%)
Query: 9 ISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSS 68
+++ LH + LL ++V+ + R + + V +
Sbjct: 29 LAVALHAGVVALLVLGWSVEKPAAETPR-------VLHTQLVMLPPAPEALVPVPVAPVA 81
Query: 69 QENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKI 128
++ + E Q K ++ + ++E + ++Q+
Sbjct: 82 PPSVEPTSAPVEAPRPAPTQPVVDPRVQAQKLEQAALARKRVEEQKREQQAQQQRERQES 141
Query: 129 SKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIA 188
+ + + + + + ++ V S + S+ A + +
Sbjct: 142 ERRRQDAEQQAAEQQRQVRQAQALAEQRQAEQARQAVADSRSYQPLSKQAPDYPQRAL-- 199
Query: 189 NWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDV 224
+ + + + G + +D
Sbjct: 200 ----DKGLEGD----CTVEYSVTPDGRIDNPKVLDG 227
>gi|116206224|ref|XP_001228921.1| hypothetical protein CHGG_02405 [Chaetomium globosum CBS 148.51]
gi|88183002|gb|EAQ90470.1| hypothetical protein CHGG_02405 [Chaetomium globosum CBS 148.51]
Length = 1283
Score = 43.7 bits (101), Expect = 0.028, Method: Composition-based stats.
Identities = 17/162 (10%), Positives = 35/162 (21%), Gaps = 1/162 (0%)
Query: 32 PISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKT 91
P + E SVD D S+ I S E + S E +
Sbjct: 570 PPPKPEEASVD-TKTGDTSESEQAAIPADTSTSAVSPAEKPKPEISTAEVEAKAPTLMSP 628
Query: 92 HATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDT 151
H + S + K+ + T + +
Sbjct: 629 HPEDTPAPLFSRESATEPSKKPSPPAEEAGDSPMTDAPTLTAAPPQETAEAETPTQPPAQ 688
Query: 152 VVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIP 193
+ + ++ + + + +P
Sbjct: 689 SPGDASIVTSEAPKPTADAPAQSKPVVGDYLKMQFVEHRVVP 730
>gi|301168500|emb|CBW28090.1| putative membrane protein [Bacteriovorax marinus SJ]
Length = 317
Score = 43.7 bits (101), Expect = 0.029, Method: Composition-based stats.
Identities = 32/285 (11%), Positives = 78/285 (27%), Gaps = 41/285 (14%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNI--YNEDYHSSKYKKIEEPVVQ 63
+ S +H+ F+ +++ + + +++ V + N + Q
Sbjct: 22 SILFSAFIHLGFI-FSKVDWSSSKKIVVEQKKEKRVKLVFRSNSKKPKQIVNTELKKTTQ 80
Query: 64 FKGSSQENLVRDFSVQENGDRFSDQTKTHA---TENETKRSSSSKGEQALKESALLRMPV 120
++ + V+ + + A N +K++ +S +L ++
Sbjct: 81 TPRDAKYLGKQSQMVERQTKAAINGSFKAAGIGVRNGSKQAQTSSKSSSLGKAKKATKSP 140
Query: 121 SPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKR-------- 172
S + +K K +DL + A + + K K ++
Sbjct: 141 SKKIVKNKNKKKIKFEDLSLGNLALAQPVTKSAPALGLKNGHKKSRGLAQNNDFMDEIPL 200
Query: 173 ----------------------IPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQL 210
Q +R + W + +
Sbjct: 201 ADMTRLNTVEYKYYGFYFRIRQKLEQYWGDSLRKQAEKMWKSGRRLASDVNKVTALKITI 260
Query: 211 NQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPST 255
+Q G +L G E L A ++ ++ F P+
Sbjct: 261 DQNGNILEVKVKSTSGINE-----LDSAAIESFNRAGPFPNPPAG 300
>gi|186477203|ref|YP_001858673.1| protein TolA [Burkholderia phymatum STM815]
gi|184193662|gb|ACC71627.1| protein TolA [Burkholderia phymatum STM815]
Length = 351
Score = 43.7 bits (101), Expect = 0.029, Method: Composition-based stats.
Identities = 16/115 (13%), Positives = 28/115 (24%), Gaps = 8/115 (6%)
Query: 136 QDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSD 195
+ A + + S S S V+ RV N
Sbjct: 226 DAERRQRLASLQGMAGGEGSTGNGLAKSGTGTGSGGNAASPGYADKVKRRVQPN---IIW 282
Query: 196 FKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFR 250
L + + + G +L G + + A +AV +S
Sbjct: 283 SGDTSGLETVVSVRCSPTGTLLSATITRSSGN-----QAWDDAALRAVQRSDPMP 332
>gi|123446312|ref|XP_001311908.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121893735|gb|EAX98978.1| hypothetical protein TVAG_431870 [Trichomonas vaginalis G3]
Length = 574
Score = 43.4 bits (100), Expect = 0.031, Method: Composition-based stats.
Identities = 8/107 (7%), Positives = 28/107 (26%)
Query: 26 NVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRF 85
+ P +SV+ ++ K+ ++ + ++ E + + +
Sbjct: 410 PQLVQPPPQIPVQVSVEPPSSKPAPKPVPKQPQQQKEKTTKATFEPPPKQQAPIPSPTDI 469
Query: 86 SDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKAT 132
+ + + A S D+ + +
Sbjct: 470 MVSSPKTMIKLVPTKEDVLAKPPPPSVPANTPQSNSQSDQDQEPEPE 516
>gi|91776658|ref|YP_546414.1| TonB-like protein [Methylobacillus flagellatus KT]
gi|91710645|gb|ABE50573.1| outer membrane transport energization protein TonB [Methylobacillus
flagellatus KT]
Length = 246
Score = 43.4 bits (100), Expect = 0.031, Method: Composition-based stats.
Identities = 18/231 (7%), Positives = 49/231 (21%), Gaps = 7/231 (3%)
Query: 34 SRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHA 93
+ E + + E + + + V+ +
Sbjct: 12 TAPEPIEQTTLQVELVTQQPTLAPSVALPEPDTINPPAPVKQPDPEPVPVVHKPAPAPVP 71
Query: 94 TENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVV 153
+ A + + + + +
Sbjct: 72 SPPRPVTKPPEPALAEPSPEAHETTEATSPTTVQEVMTAPPGDEPTPSAQPAPAAPPVHE 131
Query: 154 VRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQK 213
+ + R ++ + I + V + ++
Sbjct: 132 PALPPQPAGPSQQDIEAARNLYGSLLSQAIAKHKQYPRIAQMRGW--EGEVLLEVHCDET 189
Query: 214 GFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPSTYKSWRNITL 264
G VL G ++L E A V K+ P ++ +N+ +
Sbjct: 190 GHVLSTHVKKSSG-----HQVLDEQAITMVRKASPLPQPPEILRNTKNLVI 235
>gi|157144336|ref|YP_001451655.1| hypothetical protein CKO_00040 [Citrobacter koseri ATCC BAA-895]
gi|157081541|gb|ABV11219.1| hypothetical protein CKO_00040 [Citrobacter koseri ATCC BAA-895]
Length = 262
Score = 43.4 bits (100), Expect = 0.031, Method: Composition-based stats.
Identities = 25/237 (10%), Positives = 61/237 (25%), Gaps = 34/237 (14%)
Query: 23 FNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPV----VQFKGSSQENLVRDFSV 78
F + + P + + D + + PV + + ++
Sbjct: 31 FVWRFSDVQPATPPA--PAIMLQWADNIEAPSSPLPLPVGIAQQESAAAEEKQ------- 81
Query: 79 QENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDL 138
+ ++ ++ A E + K+ K+Q
Sbjct: 82 ---------------QAEDRQQRPVTEDRDATIEITRKKKASDGEKKKPRPPRKIKDQTS 126
Query: 139 QGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFK- 197
A + + S+++ + V+ + P D +
Sbjct: 127 DSSHAAVSSNAAPQAPVESSRIAAPFNSDSAKRDNSGASWESRVKGHLNRYKRYPGDARK 186
Query: 198 RFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPS 254
R + + F +N +G V+ G L A + ++Q P+
Sbjct: 187 RARTGTAIVTFTVNAQGTVVSNSLATSSGT-----LSLDREAVAVLERAQPLPRPPA 238
>gi|15828816|ref|NP_326176.1| xylose ABC transporter permease protein [Mycoplasma pulmonis UAB
CTIP]
gi|14089759|emb|CAC13518.1| XYLOSE ABC TRANSPORTER PERMEASE PROTEIN [Mycoplasma pulmonis]
Length = 638
Score = 43.4 bits (100), Expect = 0.031, Method: Composition-based stats.
Identities = 16/176 (9%), Positives = 50/176 (28%), Gaps = 7/176 (3%)
Query: 42 DNIYNEDYHSSKYKK-IEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKR 100
+ + +K + +N + Q+ F K+
Sbjct: 22 EIQKINELRKINLEKRKVRDQKEKAKLDSKNKKNEAKFQKLKTNFDSFAKSKNQRLNKVV 81
Query: 101 SSSSKGEQAL----KESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRP 156
S K+S K + K++ + + + ++ +
Sbjct: 82 KSIETKFDQKISTLKQSLSTTKTNEQELKDSKALYNKKKKYYESRIAKNEAKYENLIKKL 141
Query: 157 DKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQ 212
K ++K ++ Q + + ++ W++ + ++K+ Q+ +
Sbjct: 142 QYKIDTYALDKQEGQQKIDQLYLDL--GQINKRWSLKIASLNIEDTKIKLEKQIKK 195
>gi|194333416|ref|YP_002015276.1| TonB family protein [Prosthecochloris aestuarii DSM 271]
gi|194311234|gb|ACF45629.1| TonB family protein [Prosthecochloris aestuarii DSM 271]
Length = 275
Score = 43.4 bits (100), Expect = 0.031, Method: Composition-based stats.
Identities = 18/159 (11%), Positives = 46/159 (28%), Gaps = 4/159 (2%)
Query: 88 QTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKK 147
Q ++ + + L + P + +++ K Q ++
Sbjct: 96 QLPPPPLIDKPLPPKAPEVPAQLVMPPKVETPPNVGKVKQVKKEEAPPQQTLATQEEIRE 155
Query: 148 SIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMH 207
+ + + + R +V + + + RV +
Sbjct: 156 VVQKQPGVGEAGSGGGAGGIGDGPVFVPVEKMPTFRRQVKPRYPEYARRAGIEG-RVFVS 214
Query: 208 FQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKS 246
++++G + + G R + E A AV+KS
Sbjct: 215 VLISERGKPIKAQIMKREPGD---RTVFDEAAIDAVMKS 250
>gi|39998072|ref|NP_954023.1| TonB-dependent receptor [Geobacter sulfurreducens PCA]
gi|39985017|gb|AAR36373.1| TonB-dependent receptor, putative [Geobacter sulfurreducens PCA]
Length = 289
Score = 43.4 bits (100), Expect = 0.032, Method: Composition-based stats.
Identities = 25/254 (9%), Positives = 60/254 (23%), Gaps = 15/254 (5%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
L +S + + + ++ V+ S + P +
Sbjct: 30 LARAFLLSGV--AHVAAAVCVMMPAGGGTRLPPANIIVVEL-----GGSVLSAEKPVPAL 82
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
+ D + A + R+ + A + ++P
Sbjct: 83 LPLPQPSPVRRPPLPLPVKPSPVRDSSPPVALSPPSGRTQPTAPAIAPLAADPAG-AMAP 141
Query: 123 YDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIV 182
+ + + A V E + ++ +++
Sbjct: 142 SPSAMMVPVAPPQPVQAAVPQARGDGPQVTVPTVRSPEPPAASTGAADAGRIRVGYQSVL 201
Query: 183 RNRVIANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARK 241
R + P +R + + + L + G V +L A +
Sbjct: 202 RGLIERCKEYPPLARRGRMEGTAVVRVVLARSGAVRRDEVARSSSHA-----LLDNAALR 256
Query: 242 AVIKSQAFR-LSPS 254
AV F + P
Sbjct: 257 AVRTVGRFPAVPPE 270
>gi|330752061|emb|CBL80572.1| conserved hypothetical protein [uncultured Flavobacteria bacterium]
gi|330752182|emb|CBL87141.1| conserved hypothetical protein [uncultured Flavobacteria bacterium]
Length = 284
Score = 43.4 bits (100), Expect = 0.032, Method: Composition-based stats.
Identities = 18/228 (7%), Positives = 54/228 (23%), Gaps = 13/228 (5%)
Query: 11 MILHVMFLLLLYFNFNVQLLVPISRREMLSVDN--------IYNEDYHSSKYKKIEEPVV 62
+++HV+ LL F F E ++++ ++ +
Sbjct: 17 IVIHVLLLLW--FAFTGLKYQDPPPEEGIAINFGYEETGKGDNSQAAAVTPPPPTPVETP 74
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
+QE ++ + + T E + + +
Sbjct: 75 VAAPVAQEEVITQDTEDAPVIEKPKEKTVEETPKEPVEETPEEKPIVEPDPDPQPTAEQI 134
Query: 123 YDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIV 182
+ + K + + + + D L+ ++ I +
Sbjct: 135 EQQAQQDKLDRMFNTNNKGTGTGEGETTSGGDQGDPNGDLNSQRRTGNGGIGGNGKYYMS 194
Query: 183 RNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTEL 230
+ + + V + ++ G V +
Sbjct: 195 GKPID---LPEPETGCNYEGVVVVKIAVDPTGRVFEAELAPNNQIPDG 239
>gi|86157665|ref|YP_464450.1| TonB-like protein [Anaeromyxobacter dehalogenans 2CP-C]
gi|85774176|gb|ABC81013.1| TonB-like protein [Anaeromyxobacter dehalogenans 2CP-C]
Length = 431
Score = 43.4 bits (100), Expect = 0.032, Method: Composition-based stats.
Identities = 22/213 (10%), Positives = 52/213 (24%), Gaps = 11/213 (5%)
Query: 49 YHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHA-TENETKRSSSSKGE 107
+ E P +++ +V + QE + A R+ +
Sbjct: 185 QAARSTPGKEGPAAPRGTGAEKLVVPEQRAQERLAVAPRPDEPGAGDVPVAPRADQQRLN 244
Query: 108 QALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEK 167
+ + +K D Q ++ + D+ + + +
Sbjct: 245 GGGPALQVPGGAGAQGGGRKSGIDRRLLPDPQNLARIAGGPSPDRLEGVDEGDATALNTR 304
Query: 168 SSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFK-----KLRVKMHFQLNQKGFVLGKINV 222
S + + N + K + L+ G + +
Sbjct: 305 SFKYATFINRVGMAIYREWDPNRAYQARDPDGKVYPARDRTTSIELVLDGDGTIRFVKLL 364
Query: 223 DVVGGTELVRRMLRENARKAVIKSQAFRLSPST 255
D G L + +A + F P+
Sbjct: 365 DSSG-----LDFLDQEVVRAARAAGPFPNPPAG 392
>gi|239816092|ref|YP_002945002.1| protein TolA [Variovorax paradoxus S110]
gi|239802669|gb|ACS19736.1| protein TolA [Variovorax paradoxus S110]
Length = 309
Score = 43.4 bits (100), Expect = 0.033, Method: Composition-based stats.
Identities = 18/167 (10%), Positives = 42/167 (25%), Gaps = 5/167 (2%)
Query: 84 RFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISF 143
+ + K + + + K Q K + + + ++ +E + +
Sbjct: 129 QQQQRKKELEAKQRAEDEAERKKAQQQKLAEQQKKQQQEAEAKQAEAKKQQEAAAKQAAA 188
Query: 144 AEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLR 203
++ + + R PS + V N P
Sbjct: 189 DRAATLKRMQGLAGASGSDDSKGTAMRSSGPSSGYAGRIAAAVRPNITFPDAETVNGNPA 248
Query: 204 VKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFR 250
+ L G ++G G E A + + K+
Sbjct: 249 AEFEVNLAPDGTIVGVKLTKSSG-----LPSWDEAAERGLHKTDKLP 290
>gi|319790610|ref|YP_004152243.1| TonB family protein [Thermovibrio ammonificans HB-1]
gi|317115112|gb|ADU97602.1| TonB family protein [Thermovibrio ammonificans HB-1]
Length = 280
Score = 43.4 bits (100), Expect = 0.033, Method: Composition-based stats.
Identities = 32/284 (11%), Positives = 84/284 (29%), Gaps = 28/284 (9%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
+ +S+ + V+ L + +++L P + + N Y S K + P
Sbjct: 1 MSRLSLLSLFISVLINGALLYLLSIELKPPRLSEKP-EAPIVLNFGYPSPKRENGPRPKA 59
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
+ K ++ + +V++ + + T + S+ + L++ +
Sbjct: 60 ESKTVNKTPPLPKKNVKQKRHYKKKRNHSLKTSPKKTVKPSTPKRKTQLLQKNLKITKNE 119
Query: 123 YD-------------------KQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLS 163
+ + L+ S +
Sbjct: 120 MKHSHFGPTHSKRTSANSLTTPSTQNGTSPTASPLKTPSERNSTTSGLATSGACPGRKPL 179
Query: 164 KVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKINV 222
+ +++K ++ + V V + P +R + RVK+ ++ +G + +
Sbjct: 180 SSKTNTKKEPSLENYLKQVLKEVERHKFYPPIARRLGIEGRVKVEIVISPEGQLSSLRIL 239
Query: 223 DVVGGTELVRRMLRENARKAVIKSQAFRLSPSTYKSWRNITLFF 266
R+L K + F P+ + + F
Sbjct: 240 SSPS------RILTSAVVKILNNCS-FPKPPTNKRVKLEFVINF 276
>gi|224535820|ref|ZP_03676359.1| hypothetical protein BACCELL_00684 [Bacteroides cellulosilyticus
DSM 14838]
gi|224522543|gb|EEF91648.1| hypothetical protein BACCELL_00684 [Bacteroides cellulosilyticus
DSM 14838]
Length = 277
Score = 43.4 bits (100), Expect = 0.033, Method: Composition-based stats.
Identities = 25/232 (10%), Positives = 66/232 (28%), Gaps = 4/232 (1%)
Query: 6 GLAISMILHVMFLLLLYF-NFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQF 64
G+ ++++HV F+LLL F + ++ + K++
Sbjct: 14 GMVGALLVHVAFILLLILVGFALPEQQDEDGMPVMLGEVPNAFGSADPSLVKVDVMPETV 73
Query: 65 KGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYD 124
QE + ++ QE+ + + K + E K+ + +++ R
Sbjct: 74 APKVQETVEQEMLTQEDEETVVIKPKAEPKKEEVKKKPEKPEKTEAEKAEEARKLAEAKA 133
Query: 125 KQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQ---DAIAI 181
+++ +A + +F + + + S + +
Sbjct: 134 ERERREAEEAARKRVAGAFGKGAQMGSKGTTEGTGIQGSPTGNAPEGASSGTGGYGTFDL 193
Query: 182 VRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRR 233
+ + + V + +N G V+ R
Sbjct: 194 GGRSIGQGGLPRPAYNVQDEGIVVVSITVNPAGHVIATSIDRKTNTINSALR 245
>gi|289672857|ref|ZP_06493747.1| TonB, C-terminal [Pseudomonas syringae pv. syringae FF5]
gi|330895685|gb|EGH27977.1| TonB [Pseudomonas syringae pv. japonica str. M301072PT]
Length = 248
Score = 43.4 bits (100), Expect = 0.034, Method: Composition-based stats.
Identities = 22/251 (8%), Positives = 58/251 (23%), Gaps = 39/251 (15%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREM-LSVDNIYNEDYHSSKYKKIEEPVVQF 64
L + + +H + + P+ + V+ + K+ +P
Sbjct: 14 SLLLVLAVHAIAI---IVAVRWPAPQPVELPPAAMMVELAPVPEPAPPPPPKVVQPPPPP 70
Query: 65 KGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYD 124
+ + + + + + + K + + P
Sbjct: 71 APEEPTPVPEVVQAPKPEIVVPKKVEKPKPKPQPPKPQKKPEPPKEKPADEKPVDTPPT- 129
Query: 125 KQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRN 184
+P K S + +
Sbjct: 130 ----------------------------TAQPAKPVAPKPAPAPSPPSNALPNWQGDLLG 161
Query: 185 RVIANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAV 243
+ P D +R + ++ F ++ G VL + G + L + +
Sbjct: 162 HLSKYKKYPEDARRRGMQGVARLRFVVDADGNVLSYSIANSSGSS-----ALDRATMEMI 216
Query: 244 IKSQAFRLSPS 254
++Q P
Sbjct: 217 RRAQPLPKPPK 227
>gi|240136849|ref|YP_002961316.1| hypothetical protein MexAM1_META1p0071 [Methylobacterium extorquens
AM1]
gi|240006813|gb|ACS38039.1| hypothetical protein; putative exported protein; one putative TM
helix; putative F0F1-type ATP synthase subunit b COG
domain; putative Chromosome segregation ATPases COG
domain [Methylobacterium extorquens AM1]
Length = 530
Score = 43.4 bits (100), Expect = 0.035, Method: Composition-based stats.
Identities = 13/73 (17%), Positives = 24/73 (32%), Gaps = 3/73 (4%)
Query: 181 IVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINV---DVVGGTELVRRMLRE 237
+ +R+ W IP + L + LN + + T + E
Sbjct: 440 AMAHRLRQVWAIPEALRDDPSLWLTFAVTLNFDAEMTEAPKLLRSTSQRATPEQLQAAVE 499
Query: 238 NARKAVIKSQAFR 250
A +A+ +S F
Sbjct: 500 AAHRAIRESAPFP 512
>gi|251790230|ref|YP_003004951.1| TonB family protein [Dickeya zeae Ech1591]
gi|247538851|gb|ACT07472.1| TonB family protein [Dickeya zeae Ech1591]
Length = 285
Score = 43.4 bits (100), Expect = 0.035, Method: Composition-based stats.
Identities = 26/238 (10%), Positives = 60/238 (25%), Gaps = 30/238 (12%)
Query: 7 LAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKG 66
L +++ LH + L L + VP + E + E +
Sbjct: 50 LTLALALHAVVLAPLVLRPSAPTRVPPRPLP------VTIEFAAAPAEATPAEAIPSQAI 103
Query: 67 SSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQ 126
SQ L + + + T + + ++ Q + + P +
Sbjct: 104 LSQAILSQTMPPEPPPAVEPPVDEQALTPPVPQPTRVNETTQVKTPKPVKPIAKKPATPR 163
Query: 127 KISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRV 186
+ + + + + + + + +
Sbjct: 164 QPAAPAPQSASVNTAATTPAATPTAAAPVTPPSASAAYLRNPPPAYPDVA---------I 214
Query: 187 IANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVI 244
W + V ++ Q+ G V G L + AR+AV+
Sbjct: 215 NRGW----------EGMVLLNVQVRPDGKVQTIRLQRSSG-----YPALDDAAREAVL 257
>gi|86140666|ref|ZP_01059225.1| hypothetical protein MED217_15980 [Leeuwenhoekiella blandensis
MED217]
gi|85832608|gb|EAQ51057.1| hypothetical protein MED217_15980 [Leeuwenhoekiella blandensis
MED217]
Length = 277
Score = 43.4 bits (100), Expect = 0.035, Method: Composition-based stats.
Identities = 29/247 (11%), Positives = 67/247 (27%), Gaps = 22/247 (8%)
Query: 10 SMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQ 69
S+I + +LL + P S I S +P + + +
Sbjct: 17 SIIYALFLILLFFAGLTYLDPPPESG--------IAINFGTSDVGSGNIQPQAAVESAPR 68
Query: 70 ENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKIS 129
V++ + + E + K E+ E + P + +K
Sbjct: 69 NTTPEPPQVEKAPEVKEEVVTQETEEAPVIKEEPKKEEKKPVEEQPKKTETKPVEAKKPD 128
Query: 130 KATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIAN 189
+K S + + + + + + + +
Sbjct: 129 PKPDKSTTDALSSILNGPKSSGTERGGEGNDNQAGDKGDPNGDPNASSYYGNGKG-LDGD 187
Query: 190 WNIPSDFKRF-----------KKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLREN 238
N ++ + V + ++++ G V+ V GT R L +
Sbjct: 188 GNYQLGGRKALSKPKRVQDCNEAGIVVVSIEVDRNGNVIKAT--PGVRGTTNNSRCLLDP 245
Query: 239 ARKAVIK 245
A+ A +
Sbjct: 246 AKAAALA 252
>gi|240140618|ref|YP_002965098.1| hypothetical protein MexAM1_META1p4179 [Methylobacterium extorquens
AM1]
gi|240010595|gb|ACS41821.1| hypothetical protein MexAM1_META1p4179 [Methylobacterium extorquens
AM1]
Length = 148
Score = 43.4 bits (100), Expect = 0.036, Method: Composition-based stats.
Identities = 19/98 (19%), Positives = 41/98 (41%), Gaps = 5/98 (5%)
Query: 159 KELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLG 218
S + + P+ + A +R + + W +P+D + + + F LN+ G + G
Sbjct: 19 SAASSTLAWAQTASSPAVNNWAELRAALASCWTVPADTEGSQ---IAFRFGLNKTGGMRG 75
Query: 219 KINVDVV--GGTELVRRMLRENARKAVIKSQAFRLSPS 254
V G + R+ + A A+ + R++P+
Sbjct: 76 PPLVTSRQLKGDQEARKRFEDAAFAALSRCFPMRITPA 113
>gi|92119100|ref|YP_578829.1| TonB-like [Nitrobacter hamburgensis X14]
gi|91801994|gb|ABE64369.1| outer membrane transport energization protein TonB [Nitrobacter
hamburgensis X14]
Length = 251
Score = 43.4 bits (100), Expect = 0.037, Method: Composition-based stats.
Identities = 17/177 (9%), Positives = 50/177 (28%), Gaps = 8/177 (4%)
Query: 79 QENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDL 138
E D + + E + + + E V+ D + +++
Sbjct: 64 AEARDVAPGEEQMQTDEAPPPQEKAEVKTEKEPEPEPPLPQVAEPDVA--LETPPEQKKE 121
Query: 139 QGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFK- 197
+ +K+ + ++ ++ + + + P + +
Sbjct: 122 EEEKKEDKEKTPNAAPPLVAASATTAPTAAAARKAQLVSWKRKLALHLQRSKRYPREAQI 181
Query: 198 RFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPS 254
+ K+ F +++ G V+ V G L + + ++Q P
Sbjct: 182 HRETGTSKVSFVIDRHGHVVSSKIVKGSGS-----EALDRETLELLQRAQPLPEPPK 233
>gi|160874899|ref|YP_001554215.1| protein TolA [Shewanella baltica OS195]
gi|160860421|gb|ABX48955.1| protein TolA [Shewanella baltica OS195]
gi|315267136|gb|ADT93989.1| protein TolA [Shewanella baltica OS678]
Length = 341
Score = 43.4 bits (100), Expect = 0.037, Method: Composition-based stats.
Identities = 26/224 (11%), Positives = 75/224 (33%), Gaps = 13/224 (5%)
Query: 49 YHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQ 108
+ +K + K QE V + + Q+ ++ + A ++ ++ +
Sbjct: 126 KQQQEKEKAVKAEADRKLKEQERKVAEDAAQKAAEKRKVEEAAAAKAESDRKLKEAEAKA 185
Query: 109 ALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLS-KVEK 167
+++ + + +KA + + + + E +
Sbjct: 186 KAEKAKADADAKAEAKAKADAKAKADAKAKADAEAKARAQQEQEMADALAAEQAALSQTM 245
Query: 168 SSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGG 227
+ + + +++ + + N + + ++ +L GFV+
Sbjct: 246 NKQMQSEVNKYKSMIMSTIQRNLIVDESMRGK---TCQVSVRLANDGFVI-------SSQ 295
Query: 228 TELVRRMLRENARKAVIKSQAFRLSPST--YKSWRNITLFFVPS 269
T+ + A+ A++K+ +SP YK ++I L P+
Sbjct: 296 TQGGDPNVCRAAKAAILKAGKLPVSPDPAVYKELKDINLTVSPT 339
>gi|319898095|ref|YP_004136292.1| outer membrane integrity protein (tola) [Haemophilus influenzae
F3031]
gi|317433601|emb|CBY81985.1| outer membrane integrity protein (tolA) [Haemophilus influenzae
F3031]
Length = 372
Score = 43.4 bits (100), Expect = 0.038, Method: Composition-based stats.
Identities = 20/181 (11%), Positives = 54/181 (29%), Gaps = 5/181 (2%)
Query: 6 GLAISMILHVMFLLLLYFN-----FNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP 60
AIS++LH + LL + + + +V + ++
Sbjct: 12 AFAISILLHFILFGLLILSSLYHTVEIMGGGEGEGDVIGAVIVDTGTAAQEWGRIQQQKK 71
Query: 61 VVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPV 120
K E +V + + N + Q + E ++ + ++ K+ R
Sbjct: 72 GQADKQKRPEPVVEEKPPEPNQEEIKHQQEVQRQEELKRQQEQQRQQEIKKQQEQARQEA 131
Query: 121 SPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIA 180
KQ + + + + + ++E +K + + ++ +
Sbjct: 132 LEKQKQAEEARAKQAAEAAKLKADAEAKRLAAAAKQAEEEAKAKAAEIAAQKAKQEAEAK 191
Query: 181 I 181
Sbjct: 192 A 192
Score = 40.3 bits (92), Expect = 0.27, Method: Composition-based stats.
Identities = 19/195 (9%), Positives = 58/195 (29%), Gaps = 12/195 (6%)
Query: 75 DFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNK 134
+ + + K A ++ + +A ++A + + ++ + +
Sbjct: 186 QEAEAKAKLEAEAKAKAVAEAKAKAKAKAKADAEAKAKAAAEAKAEAATEAKRKADQASL 245
Query: 135 EQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPS 194
+ L G + + + S +++ + +
Sbjct: 246 DDFLNGGDIGGGSASKGGNINKGGTQGSGAALGSGDGGKVGDQYAGVIKKEIQRRFLKDP 305
Query: 195 DFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSP- 253
F ++ QL + G +LG + + A AV +++ +P
Sbjct: 306 SFAGK---VCRIKIQLGRDGAILGYQKISGSDD-------ICSAALSAVARTKKVPAAPS 355
Query: 254 -STYKSWRNITLFFV 267
Y+ +++ + F
Sbjct: 356 DEIYEKYKSPIIDFD 370
>gi|311107071|ref|YP_003979924.1| TonB family C-terminal domain-containing protein 3 [Achromobacter
xylosoxidans A8]
gi|310761760|gb|ADP17209.1| TonB family C-terminal domain protein 3 [Achromobacter xylosoxidans
A8]
Length = 299
Score = 43.4 bits (100), Expect = 0.038, Method: Composition-based stats.
Identities = 6/104 (5%), Positives = 32/104 (30%), Gaps = 6/104 (5%)
Query: 163 SKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKK-LRVKMHFQLNQKGFVLGKIN 221
+ + + + V ++ + ++P + + L +++ + + G +
Sbjct: 17 ASTTVLAAAPADRAEWTSGVMRKLHRDLSMPKEAQGLDGSLSLRLRLTVMRDGRIAAVEL 76
Query: 222 VDVVGGTELVRRMLRENARKAVIKSQAFRLSPSTYKSWRNITLF 265
G + + + ++ + + + I +
Sbjct: 77 ARSSGHV-----AVDIAVTRMIQRASPLPAFSADMPADKEILMV 115
>gi|219130271|ref|XP_002185292.1| probable cell surface glycoprotein [Phaeodactylum tricornutum CCAP
1055/1]
gi|217403207|gb|EEC43161.1| probable cell surface glycoprotein [Phaeodactylum tricornutum CCAP
1055/1]
Length = 623
Score = 43.4 bits (100), Expect = 0.038, Method: Composition-based stats.
Identities = 9/123 (7%), Positives = 26/123 (21%), Gaps = 1/123 (0%)
Query: 21 LYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQE 80
F + P+ + + + + + E + + E
Sbjct: 300 TVIVFPSPVDAPVDAPTDAP-TPLEPTPAEPTPAEPTPAEPTPAEPTPAEPTPAEPTPAE 358
Query: 81 NGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQG 140
+ E + ++ A A + ++ T E
Sbjct: 359 PTPAEPTPAEPTPAEPTPAEPTPAEPTPAEPTPAEPTPAEPTPAEPTPAEPTPAEPTPAE 418
Query: 141 ISF 143
+
Sbjct: 419 PTP 421
>gi|307728552|ref|YP_003905776.1| protein TolA [Burkholderia sp. CCGE1003]
gi|307583087|gb|ADN56485.1| protein TolA [Burkholderia sp. CCGE1003]
Length = 337
Score = 43.4 bits (100), Expect = 0.038, Method: Composition-based stats.
Identities = 33/308 (10%), Positives = 76/308 (24%), Gaps = 69/308 (22%)
Query: 4 ENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNE------------DYHS 51
++++H + LY Q P L + +
Sbjct: 19 GRAFVFALVMHALLGFFLYHGIQWQNSTPEGAEAELWTEVPDSAIPRPVTPPPVPVAPAP 78
Query: 52 SKYKKIEEPVVQFKGSSQENLVRDF--SVQENGDRFSDQTKTHATENETKRSSSSKGEQA 109
+ + +Q K Q+ R+ + Q+ ++ Q + A + + + A
Sbjct: 79 PVRDEQADIALQEKKRKQQEAAREAQLAEQQRQEKLRAQQEAEARRQQELAAEQAAKAAA 138
Query: 110 LKESALLRMPVSPYDKQKISKATNKE---------------------------------- 135
K+ L + +Q++++ ++
Sbjct: 139 AKQKQLQQQQAEKLRQQQLAEQKKQQLKEQQEEQQKQAEAQKQAEAEAQKKAEAQKAAKA 198
Query: 136 -------------QDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIV 182
+ A+ + + S S S V
Sbjct: 199 KAQAEAAAQAKKLDAERRARLAQMQGMAGPPGSAGNGLGKSGTGSGSGGTAASPGYADKV 258
Query: 183 RNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKA 242
R V N + + L + + + G +L G + + A +A
Sbjct: 259 RRVVRPN---ITWGGETEGLETVIAVRCSPTGTLLSATIAHSSGNS-----AWDDAALRA 310
Query: 243 VIKSQAFR 250
V +S
Sbjct: 311 VQRSDPMP 318
>gi|16272331|ref|NP_438544.1| cell envelope integrity inner membrane protein TolA [Haemophilus
influenzae Rd KW20]
gi|260580554|ref|ZP_05848382.1| TolA protein [Haemophilus influenzae RdAW]
gi|1174728|sp|P44678|TOLA_HAEIN RecName: Full=Protein tolA
gi|1573353|gb|AAC22041.1| outer membrane integrity protein (tolA) [Haemophilus influenzae Rd
KW20]
gi|260092896|gb|EEW76831.1| TolA protein [Haemophilus influenzae RdAW]
Length = 372
Score = 43.4 bits (100), Expect = 0.039, Method: Composition-based stats.
Identities = 18/195 (9%), Positives = 55/195 (28%), Gaps = 12/195 (6%)
Query: 75 DFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNK 134
+ + + K A + + A ++ + + ++ + +
Sbjct: 186 QEAEAKAKLEAEAKAKAVAEAKAKAEAEAKAKAAAEAKAKADAEAKAATEAKRKADQASL 245
Query: 135 EQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPS 194
+ L G + + S +++ + +
Sbjct: 246 DDFLNGGDIGGGSASKGGNTNKGGTQGSGAALGSGDGGKVGDQYAGVIKKEIQRRFLKDP 305
Query: 195 DFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSP- 253
+F ++ QL + G +LG + + A AV +++ +P
Sbjct: 306 NFAGK---VCRIKIQLGRDGTILGYQKISGSDD-------ICSAALSAVARTKKVPAAPS 355
Query: 254 -STYKSWRNITLFFV 267
Y+ +++ + F
Sbjct: 356 DEIYEKYKSPIIDFD 370
Score = 39.9 bits (91), Expect = 0.41, Method: Composition-based stats.
Identities = 20/181 (11%), Positives = 54/181 (29%), Gaps = 5/181 (2%)
Query: 6 GLAISMILHVMFLLLLYFN-----FNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP 60
AIS++LH + LL + + + +V + ++
Sbjct: 12 AFAISILLHFILFGLLILSSLYHTVEIMGGGEGEGDVIGAVIVDTGTAAQEWGRIQQQKK 71
Query: 61 VVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPV 120
K E +V + + N + Q + E ++ + ++ K+ R
Sbjct: 72 GQADKQKRPEPVVEEKPPEPNQEEIKHQQEVQRQEELKRQQEQQRQQEIKKQQEQARQEA 131
Query: 121 SPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIA 180
KQ + + + + + ++E +K + + ++ +
Sbjct: 132 LEKQKQAEEAKAKQAAEAAKLKADAEAKRLAAAAKQAEEEAKAKAAEIAAQKAKQEAEAK 191
Query: 181 I 181
Sbjct: 192 A 192
>gi|91781924|ref|YP_557130.1| TonB protein [Burkholderia xenovorans LB400]
gi|91685878|gb|ABE29078.1| Cell division and transport-associated protein TolA [Burkholderia
xenovorans LB400]
Length = 347
Score = 43.4 bits (100), Expect = 0.039, Method: Composition-based stats.
Identities = 12/73 (16%), Positives = 21/73 (28%), Gaps = 8/73 (10%)
Query: 178 AIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRE 237
VR V N + L + + + G +LG G +
Sbjct: 264 YSDKVRRAVRPN---ITWGGETSGLETVVSVRCSPTGTLLGATISRSSGN-----PAWDD 315
Query: 238 NARKAVIKSQAFR 250
A +AV ++
Sbjct: 316 AALRAVQRTDPMP 328
>gi|260582353|ref|ZP_05850146.1| TolA protein [Haemophilus influenzae NT127]
gi|260094721|gb|EEW78616.1| TolA protein [Haemophilus influenzae NT127]
Length = 404
Score = 43.4 bits (100), Expect = 0.040, Method: Composition-based stats.
Identities = 13/123 (10%), Positives = 36/123 (29%), Gaps = 12/123 (9%)
Query: 147 KSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKM 206
+ + S +++ + + +F ++
Sbjct: 290 SASKGGNTNKGGTQGSGAALGSGDGGKVGDQYAGVIKKEIQRRFLKDPNFAGK---VCRI 346
Query: 207 HFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSP--STYKSWRNITL 264
QL + G +LG + + A AV +++ +P Y+ +++ +
Sbjct: 347 KIQLGRDGTILGYQKISGSDD-------ICSAALSAVARTKKVPAAPSDEIYEKYKSPII 399
Query: 265 FFV 267
F
Sbjct: 400 DFD 402
Score = 42.6 bits (98), Expect = 0.064, Method: Composition-based stats.
Identities = 20/132 (15%), Positives = 47/132 (35%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
AIS++LH + LL + + + + E + ++ Q K
Sbjct: 12 AFAISILLHFILFGLLILSSLYRTVEIMGGGEGEGDVIGAVIVDTGTAAQEWGRIQQQKK 71
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
G + + + V+E + + H E + + + EQ ++ + + +
Sbjct: 72 GQADKQKRPEPVVEEKPPEPNQEEIKHQQEVQRQEELKRQQEQQRQQEQQRQQEIKKQQE 131
Query: 126 QKISKATNKEQD 137
Q +A K++
Sbjct: 132 QARQEALEKQKQ 143
>gi|315611759|ref|ZP_07886681.1| endo-beta-N-acetylglucosaminidase D [Streptococcus sanguinis ATCC
49296]
gi|315316174|gb|EFU64204.1| endo-beta-N-acetylglucosaminidase D [Streptococcus sanguinis ATCC
49296]
Length = 1574
Score = 43.0 bits (99), Expect = 0.040, Method: Composition-based stats.
Identities = 17/177 (9%), Positives = 34/177 (19%), Gaps = 10/177 (5%)
Query: 29 LLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQ 88
PIS D + ++ E Q + V E
Sbjct: 79 AEQPISENTPAITDLVNEKEEAKPALTDKTEKPAQPTEKEEVKPAEAPQVIEKKADKPTL 138
Query: 89 TKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKS 148
E ++ R K + N+ +
Sbjct: 139 ADVPKNEEKSLRPKEIKFDTWEDLLKWEPGAREDDP-------INRSSVELAKRHRGQLV 191
Query: 149 IDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVK 205
+ R + L + K+ + + W ++ L
Sbjct: 192 NEKASRRAKVQALANTNSKAKDHASVGGEE---FKAYAFDYWQYLDSMVFWEGLVPT 245
>gi|253687159|ref|YP_003016349.1| TonB family protein [Pectobacterium carotovorum subsp. carotovorum
PC1]
gi|251753737|gb|ACT11813.1| TonB family protein [Pectobacterium carotovorum subsp. carotovorum
PC1]
Length = 314
Score = 43.0 bits (99), Expect = 0.040, Method: Composition-based stats.
Identities = 26/244 (10%), Positives = 62/244 (25%), Gaps = 14/244 (5%)
Query: 7 LAISMILHVMFLLLLYFNFNVQLLVP---------ISRREMLSVDNIYNEDYHSSKYKKI 57
+S + H + + +++ + + + M + + + +
Sbjct: 47 FVLSCVAHALLAVFFLLHYSPKENIEDMAGNAGGSMQVTMMAAAMSQAADTSPPVADPPV 106
Query: 58 EEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLR 117
+P V + K+ K E+ KE R
Sbjct: 107 TQPTPVVMPILTPLPEHPNPVIKQPVIERKPVAEKKPPVREKKQPEKKPEEKPKEQLQAR 166
Query: 118 MPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQD 177
+ ++K Q S K + + +
Sbjct: 167 TQQAQQTEKKSESPVATAQTGDAPSPMPSSVGMPGSATTAKAGESDSGQAARGAGKSNSQ 226
Query: 178 AIAIVRNRVIANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLR 236
+ RV N P+ K + +V++ F + G V + +++
Sbjct: 227 NFKALHRRV----NYPARAKALGVEGKVRVKFDITGSGTVTNVQILSETPDGVFGDDVMK 282
Query: 237 ENAR 240
+ AR
Sbjct: 283 DMAR 286
>gi|154174006|ref|YP_001407679.1| protein TonB [Campylobacter curvus 525.92]
gi|112803642|gb|EAU00986.1| protein TonB [Campylobacter curvus 525.92]
Length = 283
Score = 43.0 bits (99), Expect = 0.041, Method: Composition-based stats.
Identities = 30/256 (11%), Positives = 68/256 (26%), Gaps = 18/256 (7%)
Query: 4 ENGLAISMILHVMFLLLLYFNFNVQLLVPIS-----------RREMLSVDNIYNEDYHSS 52
+GL S++LHV L+ + + + P + + +
Sbjct: 13 YSGLFASILLHVA-ALIFILHHPFEEIKPAENKSIKMALESFDMPQAKAEVSTAPEIAET 71
Query: 53 KYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKE 112
P E + + + K + + +
Sbjct: 72 LMIPEPTPPAPPPPPPPEVKPPEPKPIPPEPKPEPKPKPEPKKEPKPEPKPKPKPKPEPK 131
Query: 113 SALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKR 172
P + + T Q S + +SK+ + +
Sbjct: 132 KQEEVAQPQPTPPVQAPQPTQPATTTQTSSASSSMHNLPPNGANRAAAPVSKIGELNLAN 191
Query: 173 IPSQDAIAIVRNRVIANWNIPSDFKR-FKKLRVKMHFQLNQKGFVLGKINVDVVGGTELV 231
+ A + N + + P + ++ + V++ F L Q G V + G
Sbjct: 192 SAGDENFAKIVNAIKKHQKYPKNAQKMRHQGVVEVRFLLKQNGSVEDIKVIKSSG----- 246
Query: 232 RRMLRENARKAVIKSQ 247
L + A + V ++
Sbjct: 247 YSSLDDGAIENVERAS 262
>gi|62185543|ref|YP_220328.1| putative exported TonB protein [Chlamydophila abortus S26/3]
gi|62148610|emb|CAH64382.1| putative exported TonB protein [Chlamydophila abortus S26/3]
Length = 252
Score = 43.0 bits (99), Expect = 0.042, Method: Composition-based stats.
Identities = 32/265 (12%), Positives = 74/265 (27%), Gaps = 25/265 (9%)
Query: 3 LENGLAISM---ILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEE 59
++ L S+ I+H + LL ++ + P +R + S
Sbjct: 1 MKKALPYSLFALIVHGAGIALLSYS---PVNKPSTRPVPFKEKIVALSGPCPSIATLTTP 57
Query: 60 PVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMP 119
+ + Q+ + + K + +T+ + + +
Sbjct: 58 LPQPTLKGHTNKRDIEQAPQKPNPQPPVEKKKTEDKAKTRVPEQPREKPKPQPKGE---- 113
Query: 120 VSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAI 179
P ++ I K + K D+ D +K +QD
Sbjct: 114 NPPTARKSIGKDAKLKAIADLTKTLSKHLDDSNARLADITLPTNKHLSVQTSLATTQDE- 172
Query: 180 AIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENA 239
+ V++ L +G++ + + + +E ++R +A
Sbjct: 173 -------ELCQLLREYMLLPFSGEVRLKLVLTPQGWIQECLVLSEISESEKELILMRIHA 225
Query: 240 RKAVIKSQAFRLSPSTYKSWRNITL 264
F+ YK +NI
Sbjct: 226 I-------PFKKFLDKYKISKNIVF 243
>gi|148977420|ref|ZP_01814020.1| tolA protein [Vibrionales bacterium SWAT-3]
gi|145963372|gb|EDK28637.1| tolA protein [Vibrionales bacterium SWAT-3]
Length = 355
Score = 43.0 bits (99), Expect = 0.042, Method: Composition-based stats.
Identities = 20/166 (12%), Positives = 59/166 (35%), Gaps = 2/166 (1%)
Query: 4 ENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNI--YNEDYHSSKYKKIEEPV 61
+ L IS+ LHV+ + L + + + P +M+ I + + ++ E
Sbjct: 12 KKPLLISLGLHVVLFVALIWGADFTMSEPKPTGQMVQAVVIDPQLVRQQAQQIRQQREAA 71
Query: 62 VQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVS 121
+ + + L R+ E + ++ E + K + +++ + + +
Sbjct: 72 SKKEQERLDKLRRESERLEKNRKAEEENIRKLKEQQAKDAKAAREAEKRRVENEKKRKAE 131
Query: 122 PYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEK 167
++ K K + + + A + + + ++ E+
Sbjct: 132 QARLEQEKKKAAKAEADRKLKEAALVKAENELKAKEAAIAKAEQER 177
Score = 37.2 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 26/241 (10%), Positives = 86/241 (35%), Gaps = 22/241 (9%)
Query: 44 IYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSS 103
+ NE ++ ++E+ + + + +++ ++ + + + A + + +
Sbjct: 122 VENEKKRKAEQARLEQEKKKAAKAEADRKLKEAALVKAENELKAKEAAIAKAEQERVAKE 181
Query: 104 SKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISF-------------AEKKSID 150
++A +++ + +KQ+I+K + ++ +++
Sbjct: 182 KAAQEAAEKARKEKEAAERAEKQRIAKEKEAAAAAEKARKAKEAAARAEKERKQQEAALN 241
Query: 151 TVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQL 210
+ + + + + +Q AI + N + ++ +++ +L
Sbjct: 242 DIFAGLETEATQNSSARQQFISDEAQRYGAIYTQLIQQNLLLEDSYRGR---SCRVNLKL 298
Query: 211 NQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLS--PSTYKSWRNITLFFVP 268
G + + + R+ ++AV + Q++ L P KS ++I L P
Sbjct: 299 IPTG---SNAILGSLSILDGDSRLCA-ATKRAVAQVQSYPLPKDPDIVKSLKDINLTVSP 354
Query: 269 S 269
Sbjct: 355 E 355
>gi|319775688|ref|YP_004138176.1| outer membrane integrity protein (tolA) [Haemophilus influenzae
F3047]
gi|317450279|emb|CBY86495.1| outer membrane integrity protein (tolA) [Haemophilus influenzae
F3047]
Length = 398
Score = 43.0 bits (99), Expect = 0.042, Method: Composition-based stats.
Identities = 20/181 (11%), Positives = 54/181 (29%), Gaps = 5/181 (2%)
Query: 6 GLAISMILHVMFLLLLYFN-----FNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP 60
AIS++LH + LL + + + +V + ++
Sbjct: 12 AFAISILLHFILFGLLILSSLYHTVEIMGGGEGEGDVIGAVIVDTGTAAQEWGRIQQQKK 71
Query: 61 VVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPV 120
K E +V + + N + Q + E ++ + ++ K+ R
Sbjct: 72 GQADKQKRPEPVVEEKPPEPNQEEIKHQQEVQRQEELKRQQEQQRQQEIKKQQEQTRQEA 131
Query: 121 SPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIA 180
KQ + + + + + ++E +K + + ++ +
Sbjct: 132 LEKQKQAEEARAKQAAEAAKLKADAEAKRLAAAAKQAEEEAKAKAAEIAAQKAKQEAEAK 191
Query: 181 I 181
Sbjct: 192 A 192
Score = 40.3 bits (92), Expect = 0.31, Method: Composition-based stats.
Identities = 13/123 (10%), Positives = 36/123 (29%), Gaps = 12/123 (9%)
Query: 147 KSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKM 206
+ + + S +++ + + F ++
Sbjct: 284 SASKGGNINKGGTQGSGAALGSGDGGKVGDQYAGVIKKEIQRRFLKDPSFAGK---VCRI 340
Query: 207 HFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSP--STYKSWRNITL 264
QL + G +LG + + A AV +++ +P Y+ +++ +
Sbjct: 341 KIQLGRDGAILGYQKISGSDD-------ICSAALSAVARTKKVPAAPSDEIYEKYKSPII 393
Query: 265 FFV 267
F
Sbjct: 394 DFD 396
>gi|319791682|ref|YP_004153322.1| tonb family protein [Variovorax paradoxus EPS]
gi|315594145|gb|ADU35211.1| TonB family protein [Variovorax paradoxus EPS]
Length = 283
Score = 43.0 bits (99), Expect = 0.043, Method: Composition-based stats.
Identities = 35/252 (13%), Positives = 78/252 (30%), Gaps = 22/252 (8%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRR-EMLSVDNIYNEDYHSSKYKKIEEPV 61
L+ L +S+I H L + + + E++ V+ K+
Sbjct: 9 LQIALGVSVIAHAALLAVRFVDPESFNRAFTDTPLEVILVN--SKTKERPDANAKLMAQT 66
Query: 62 VQFKGSSQENLVRDFSVQEN-----GDRFSDQTKTHATENETKRSSSSKGEQALKESALL 116
G + + + GD F D K + ++ ++ + +
Sbjct: 67 SLAGGGDLDKGRATSPLPPSSFTAVGDSFEDARKQVDALQAEQMQMITQLKRDIAAMPVR 126
Query: 117 RMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQ 176
+ + ++ + Q ++ ++ E++ + + S +
Sbjct: 127 DPRNAGDPTEAAAQEEKRRQMVELLAQIERRVNEENSRPKKRYV------SPSTREAAFA 180
Query: 177 DAIAIVRNRVIANWNIPSDFKRFKKL--RVKMHFQLNQKGFVLGKINVDVVGGTELVRRM 234
+ + RV A KKL +KM +N G VL + G
Sbjct: 181 VYVDTMLRRVEARAAENFPELAGKKLYGELKMTLTVNFDGNVLATVVDQSSGN-----IA 235
Query: 235 LRENARKAVIKS 246
L A +A+++S
Sbjct: 236 LDRRA-QAIVRS 246
>gi|301169085|emb|CBW28682.1| membrane anchored protein in TolA-TolQ-TolR complex [Haemophilus
influenzae 10810]
Length = 347
Score = 43.0 bits (99), Expect = 0.043, Method: Composition-based stats.
Identities = 22/144 (15%), Positives = 48/144 (33%), Gaps = 1/144 (0%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
AIS++LH + LL + + + E D I + + + Q K
Sbjct: 12 AFAISILLHFILFGLLILSSLYHTVEIMGGGEGEG-DVIGAVIVDTGTAAQEWGRIQQQK 70
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
+ R V E +Q + + ++ + E ++ + + +
Sbjct: 71 KGQADKQKRPEPVVEEKPPEPNQEEIKHRQEVQRQEVQRQEEIKHQQEVQRQEELRRQQE 130
Query: 126 QKISKATNKEQDLQGISFAEKKSI 149
Q+ + K+Q+ EK+
Sbjct: 131 QQRQQEIKKQQEQARQEALEKQKQ 154
Score = 42.6 bits (98), Expect = 0.053, Method: Composition-based stats.
Identities = 13/123 (10%), Positives = 36/123 (29%), Gaps = 12/123 (9%)
Query: 147 KSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKM 206
+ + S +++ + + +F ++
Sbjct: 233 SASKGGNTNKGGTQGSGAALGSGDGGKVGDQYAGVIKKEIQRRFLKDPNFAGK---VCRI 289
Query: 207 HFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSP--STYKSWRNITL 264
QL + G +LG + + A AV +++ +P Y+ +++ +
Sbjct: 290 KIQLGRDGTILGYQKISGSDD-------ICSAALSAVARTKKVPAAPSDEIYEKYKSPII 342
Query: 265 FFV 267
F
Sbjct: 343 DFD 345
>gi|319794186|ref|YP_004155826.1| protein tola [Variovorax paradoxus EPS]
gi|315596649|gb|ADU37715.1| protein TolA [Variovorax paradoxus EPS]
Length = 306
Score = 43.0 bits (99), Expect = 0.043, Method: Composition-based stats.
Identities = 24/273 (8%), Positives = 61/273 (22%), Gaps = 32/273 (11%)
Query: 5 NGLAISMILHVMFLLLLYFNFNVQLLVPISRR--EMLSVDNIYNEDYHSSKYKKIEEPVV 62
+ +++I H + + L + + E+ S S+ P
Sbjct: 20 RAVVLALIAHALLIAALTWGVRWRSDADEGAVDAELWSSTVQQAAPRLSAPEAPTPAPAP 79
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
+ + + + + ++ + E ++ + +
Sbjct: 80 PPPAPTPPPPPAAKAPEPAPAPKAPDIALEREKKLKEQKEQKERELEQQQQQQKKKELEA 139
Query: 123 YDKQKISKATNKEQDLQ-------------------------GISFAEKKSIDTVVVRPD 157
+ + KEQ + + ++ +
Sbjct: 140 KQRAEDEAERKKEQQQKLAEQKKQQEAEAKQAEAKKAEAAAKQAAADRAATLKRMQGLAG 199
Query: 158 KKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVL 217
+ R PS + V N P + L G ++
Sbjct: 200 ASGADDSKGTALRSSGPSSGYAGRIAAAVRPNITFPDADTVNGNPAAEFEVNLAPDGTIV 259
Query: 218 GKINVDVVGGTELVRRMLRENARKAVIKSQAFR 250
G G E A + + K+
Sbjct: 260 GVKLTRSSG-----LPAWDEAAERGLHKTDRLP 287
>gi|259416598|ref|ZP_05740518.1| TonB family C- domain protein [Silicibacter sp. TrichCH4B]
gi|259348037|gb|EEW59814.1| TonB family C- domain protein [Silicibacter sp. TrichCH4B]
Length = 291
Score = 43.0 bits (99), Expect = 0.043, Method: Composition-based stats.
Identities = 19/205 (9%), Positives = 44/205 (21%), Gaps = 12/205 (5%)
Query: 31 VPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTK 90
P+ E + + QE + DQ +
Sbjct: 72 EPVVPTEPDRATSPQVQPVTPEVTVPKTAQSASAVIPVTSAAAAVPVEQEVTEVQPDQVE 131
Query: 91 THATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSID 150
++ + S + E P + ++
Sbjct: 132 PVDEPSDLAPAQSPRPETRPDPKPDQPDKAKPRQAAP--------RGNSTVNARAGTESG 183
Query: 151 TVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQL 210
R + + S + + +V ++ + K + F +
Sbjct: 184 AENQRAAEAASTRPAQGSGAGNAAASNYQGLVMRKISRVRKPRTSVKG----VAHVSFVI 239
Query: 211 NQKGFVLGKINVDVVGGTELVRRML 235
G + G +EL + L
Sbjct: 240 GGGGQLASLRIRKSSGSSELDQLAL 264
>gi|217973705|ref|YP_002358456.1| protein TolA [Shewanella baltica OS223]
gi|217498840|gb|ACK47033.1| protein TolA [Shewanella baltica OS223]
Length = 340
Score = 43.0 bits (99), Expect = 0.043, Method: Composition-based stats.
Identities = 26/224 (11%), Positives = 72/224 (32%), Gaps = 13/224 (5%)
Query: 49 YHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQ 108
+ +K + K QE V + + Q+ ++ + A ++ ++ +
Sbjct: 126 KQQQEKEKAVKAEADRKLKEQERKVAEDAAQKAAEKRKVEEAAAAKAESDRKLKEAEAKA 185
Query: 109 ALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLS-KVEK 167
+++ + + +KA + + + + E +
Sbjct: 186 KAEKAKADADAKAEAKAKADAKAKADAKAKADAEAKARAQQEQEMADALAAEQAALSQTM 245
Query: 168 SSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGG 227
+ + + A++++ + N + + + +L GFV+ G
Sbjct: 246 NKQMQSEVGKYQAMIKSTIQRNLVVDESMRGK---TCTVSVRLANDGFVISSQ----TKG 298
Query: 228 TELVRRMLRENARKAVIKSQAFRLSPST--YKSWRNITLFFVPS 269
+ A+ A++K+ +SP Y + I L P+
Sbjct: 299 GDPNV---CRAAKAAILKAGKLPVSPDPAVYNLMKEINLIVEPT 339
>gi|153000266|ref|YP_001365947.1| Tol-Pal system TolA [Shewanella baltica OS185]
gi|151364884|gb|ABS07884.1| Tol-Pal system TolA [Shewanella baltica OS185]
Length = 340
Score = 43.0 bits (99), Expect = 0.043, Method: Composition-based stats.
Identities = 26/224 (11%), Positives = 72/224 (32%), Gaps = 13/224 (5%)
Query: 49 YHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQ 108
+ +K + K QE V + + Q+ ++ + A ++ ++ +
Sbjct: 126 KQQQEKEKAVKAEADRKLKEQERKVAEDAAQKAAEKRKVEEAAAAKAESDRKLKEAEAKA 185
Query: 109 ALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLS-KVEK 167
+++ + + +KA + + + + E +
Sbjct: 186 KAEKAKADADAKAEAKAKADAKAEADAKAKADAEAKARAQQEQEMADALAAEQAALSQTM 245
Query: 168 SSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGG 227
+ + + A++++ + N + + + +L GFV+ G
Sbjct: 246 NKQMQSEVGKYQAMIKSTIQRNLVVDESMRGK---TCTVSVRLANDGFVISSQ----TKG 298
Query: 228 TELVRRMLRENARKAVIKSQAFRLSPST--YKSWRNITLFFVPS 269
+ A+ A++K+ +SP Y + I L P+
Sbjct: 299 GDPNV---CRAAKAAILKAGKLPVSPDPAVYNLMKEINLIVEPT 339
>gi|242816458|ref|XP_002486782.1| conserved hypothetical protein [Talaromyces stipitatus ATCC 10500]
gi|218715121|gb|EED14544.1| conserved hypothetical protein [Talaromyces stipitatus ATCC 10500]
Length = 455
Score = 43.0 bits (99), Expect = 0.044, Method: Composition-based stats.
Identities = 15/140 (10%), Positives = 33/140 (23%)
Query: 26 NVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRF 85
+ + PI E + VD D + + S + +
Sbjct: 101 PIPVDEPIPVDEPVPVDEPIPADEPVPADEPVPADEPVPVDESIPADEPVPADEPVPADE 160
Query: 86 SDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAE 145
+E + E+ E + S + Q +K +
Sbjct: 161 PVPVDESIPADEPVPAEEPVPEEGPIEQPVESPDRSCFRIQVSAKHLKLASPVFRKMLIG 220
Query: 146 KKSIDTVVVRPDKKELLSKV 165
+ P E+ ++
Sbjct: 221 GWKESVACLAPSSVEITAES 240
Score = 43.0 bits (99), Expect = 0.046, Method: Composition-based stats.
Identities = 10/101 (9%), Positives = 19/101 (18%)
Query: 26 NVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRF 85
V + P+ E + VD D + I +
Sbjct: 89 PVLVDEPVPVDEPIPVDEPIPVDEPVPVDEPIPADEPVPADEPVPADEPVPVDESIPADE 148
Query: 86 SDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQ 126
+E S + P ++
Sbjct: 149 PVPADEPVPADEPVPVDESIPADEPVPAEEPVPEEGPIEQP 189
Score = 41.8 bits (96), Expect = 0.096, Method: Composition-based stats.
Identities = 11/122 (9%), Positives = 26/122 (21%)
Query: 26 NVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRF 85
V + PI E + VD D + + + +
Sbjct: 95 PVPVDEPIPVDEPIPVDEPVPVDEPIPADEPVPADEPVPADEPVPVDESIPADEPVPADE 154
Query: 86 SDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAE 145
+E+ + + + + + L+ S
Sbjct: 155 PVPADEPVPVDESIPADEPVPAEEPVPEEGPIEQPVESPDRSCFRIQVSAKHLKLASPVF 214
Query: 146 KK 147
+K
Sbjct: 215 RK 216
>gi|220916016|ref|YP_002491320.1| TonB family protein [Anaeromyxobacter dehalogenans 2CP-1]
gi|219953870|gb|ACL64254.1| TonB family protein [Anaeromyxobacter dehalogenans 2CP-1]
Length = 164
Score = 43.0 bits (99), Expect = 0.044, Method: Composition-based stats.
Identities = 11/73 (15%), Positives = 24/73 (32%), Gaps = 5/73 (6%)
Query: 181 IVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENAR 240
++ ++ + P+ V++ F + G V V G +L A
Sbjct: 82 QLQRQIERDPYPPAAELMGWSGTVRVGFTVLTDGSVADLRVVVSSGHG-----VLDRAAL 136
Query: 241 KAVIKSQAFRLSP 253
+ K+ + P
Sbjct: 137 AVIRKAAPYPRPP 149
>gi|218887449|ref|YP_002436770.1| TonB family protein [Desulfovibrio vulgaris str. 'Miyazaki F']
gi|218758403|gb|ACL09302.1| TonB family protein [Desulfovibrio vulgaris str. 'Miyazaki F']
Length = 163
Score = 43.0 bits (99), Expect = 0.046, Method: Composition-based stats.
Identities = 17/103 (16%), Positives = 33/103 (32%), Gaps = 8/103 (7%)
Query: 169 SRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGT 228
+ P V V +W + L V++ ++ G + G
Sbjct: 65 ASASAPGPAYAQQVMMMVRDHWEF-PALTSPQPLTVRVRARVTPNGQIWDFNVEQSSGQA 123
Query: 229 ELVRRMLRENARKAVIKSQAFRLSPSTYKSWRNITLFFVPSKM 271
+ +A KA+ K PS ++++ L F +M
Sbjct: 124 D-----FDASALKALGKVGMLPPPPS--PEYQDLLLTFNLQEM 159
>gi|218510316|ref|ZP_03508194.1| hypothetical protein RetlB5_24319 [Rhizobium etli Brasil 5]
Length = 102
Score = 43.0 bits (99), Expect = 0.046, Method: Composition-based stats.
Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
Query: 216 VLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRL-SPSTYKSWRNITLFF---VPS 269
++G V GG+ + L A +AV++S F + Y+SWR + L F P+
Sbjct: 44 IVGSSEVTAAGGSAAAGKALSAAALRAVLRSSPFTMIPKENYESWREVVLRFESGDPT 101
>gi|73540498|ref|YP_295018.1| TonB, C-terminal [Ralstonia eutropha JMP134]
gi|72117911|gb|AAZ60174.1| TonB, C-terminal [Ralstonia eutropha JMP134]
Length = 378
Score = 43.0 bits (99), Expect = 0.046, Method: Composition-based stats.
Identities = 25/218 (11%), Positives = 60/218 (27%), Gaps = 9/218 (4%)
Query: 54 YKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKES 113
+ ++ Q +E R+ + + + A ++ + +A +S
Sbjct: 169 KEDAKKKAAQQDQQRREQAERERKEADAKAKAKAEADAKAKAEAQAQAKAKADAEAKAKS 228
Query: 114 ALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRI 173
+ + + +A Q ++ + + + + +
Sbjct: 229 EAQAKAKADAEAKAKREAAANAQRKGELARLQALAGGAGAGGQGGGGVGNTAGAGAGGGG 288
Query: 174 PSQD-AIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVR 232
+ VR RV N D + QL G ++ G +
Sbjct: 289 KASPGYPDRVRRRVKPNIVFTEDVPG--NPTAVVSVQLAPDGSLMSARLSKSSGNS---- 342
Query: 233 RMLRENARKAVIKSQAFRLSPSTYKSWRNITLFFVPSK 270
+AV +S + K+ + T+ F P
Sbjct: 343 -AWDNAVLRAVERSDPLPRDENG-KAPASFTITFRPKD 378
>gi|262065977|ref|ZP_06025589.1| TonB protein [Fusobacterium periodonticum ATCC 33693]
gi|291380334|gb|EFE87852.1| TonB protein [Fusobacterium periodonticum ATCC 33693]
Length = 265
Score = 43.0 bits (99), Expect = 0.046, Method: Composition-based stats.
Identities = 28/267 (10%), Positives = 78/267 (29%), Gaps = 12/267 (4%)
Query: 3 LENGLAISMILHVMFLLLLY-FNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPV 61
++ + IS+I+H+ L L + + E++ + + + + K ++
Sbjct: 1 MKKYILISLIVHLAILFLFATIKTEEVEKEKLVKNEVVPIAFVAKQTSDNPGGKTLDTHE 60
Query: 62 VQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVS 121
+ + + + E + +++ K E + +
Sbjct: 61 REKPKQESPKTEPKIEKKVEKKIEEKKPEEKPVEKKVEKTEEKKIESNIPSKEDTSHSDN 120
Query: 122 PYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAI 181
S +T+ S + ++ + + S+
Sbjct: 121 SSKSSSESSSTSSSDKSSNHSSEGGSPNGSSSGEDLGSNFIADGDGTYIALT-SEGINYQ 179
Query: 182 VRNRVIANW-NIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENAR 240
+ N V ++ + +++V + F + KG V +
Sbjct: 180 IINEVEPDYPSQAESIGYSNQVKVTVKFLVGLKGNVEKAEIIKSHKDLG-----FDAEVM 234
Query: 241 KAVIKSQAFRLSPSTYKSWRNITLFFV 267
KA+ K + + +NI ++F
Sbjct: 235 KAIKKWK----FKPIFHKGKNIKVYFT 257
>gi|167646064|ref|YP_001683727.1| TonB family protein [Caulobacter sp. K31]
gi|167348494|gb|ABZ71229.1| TonB family protein [Caulobacter sp. K31]
Length = 171
Score = 43.0 bits (99), Expect = 0.047, Method: Composition-based stats.
Identities = 24/161 (14%), Positives = 52/161 (32%), Gaps = 8/161 (4%)
Query: 112 ESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRK 171
+ + L P K A + S + + + PD + + + +
Sbjct: 16 KGSPLARERQPATPSKPVAAESLASAQTPSSPSPAGAGEGRRASPDDGKASTSTQPGAID 75
Query: 172 RIPSQDAIAIVRNRVIANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKINVDVVGGTEL 230
D + + P+ + + V++ F ++Q+G V+G +
Sbjct: 76 PAVGADYRQRLLAHIQPFRRFPTQAQDADARGIVQLIFMVDQRGSVVGVWV-----KSSS 130
Query: 231 VRRMLRENARKAVIKSQAFRLSPSTYKSWRNITL--FFVPS 269
+L A V+++Q P + + L F PS
Sbjct: 131 GFEVLDAEAVATVLRAQPMPRVPPGLPAPLTVQLPVSFNPS 171
>gi|329122258|ref|ZP_08250846.1| TolA colicin import membrane protein [Haemophilus aegyptius ATCC
11116]
gi|327473819|gb|EGF19236.1| TolA colicin import membrane protein [Haemophilus aegyptius ATCC
11116]
Length = 372
Score = 43.0 bits (99), Expect = 0.047, Method: Composition-based stats.
Identities = 18/126 (14%), Positives = 39/126 (30%), Gaps = 5/126 (3%)
Query: 6 GLAISMILHVMFLLLLYFN-----FNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP 60
AIS++LH + LL + + + +V + ++
Sbjct: 12 AFAISILLHFILFGLLILSSLYHTVEIMGGGEGEGDVIGAVIVDTGTAAQEWGRIQQQKK 71
Query: 61 VVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPV 120
K E +V + + N + Q + E ++ + ++ K+ R
Sbjct: 72 GQSDKQKRPEPVVEEKPPEPNQEEIKHQQEVQRQEELKRQQEQQRQQEIKKQQEQARQEA 131
Query: 121 SPYDKQ 126
KQ
Sbjct: 132 LEKQKQ 137
Score = 41.4 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 13/123 (10%), Positives = 36/123 (29%), Gaps = 12/123 (9%)
Query: 147 KSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKM 206
+ + + S +++ + + F ++
Sbjct: 258 SASKGGNINKGGTQGSGAALGSGDGGKVGDQYAGVIKKEIQRRFLKDPSFAGK---VCRI 314
Query: 207 HFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSP--STYKSWRNITL 264
QL + G +LG + + A AV +++ +P Y+ +++ +
Sbjct: 315 KIQLGRDGAILGYQKISGSDD-------ICSAALSAVARTKKVPAAPSDEIYEKYKSPII 367
Query: 265 FFV 267
F
Sbjct: 368 DFD 370
>gi|307297207|ref|ZP_07577017.1| TonB family protein [Sphingobium chlorophenolicum L-1]
gi|306877354|gb|EFN08587.1| TonB family protein [Sphingobium chlorophenolicum L-1]
Length = 253
Score = 43.0 bits (99), Expect = 0.048, Method: Composition-based stats.
Identities = 15/171 (8%), Positives = 38/171 (22%), Gaps = 7/171 (4%)
Query: 86 SDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK-QKISKATNKEQDLQGISFA 144
+ +E P+ P + ++ ++
Sbjct: 68 PMRHAAQPALTVVDLRLPVAPVPPPEEDETETPPIPPAETIRQPEPVEPPPPVVRNPVAM 127
Query: 145 EKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDF-KRFKKLR 203
V + + + V + P + R ++
Sbjct: 128 VAPPPAPVERAAEPVLVPDPPPPAPPASDGQDSWEGRVLAALNRYLRYPRNALARREQGA 187
Query: 204 VKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPS 254
+ F +++ G V+ G + L A ++Q P
Sbjct: 188 PLIRFVMDRDGRVMSVGLRRTSGSAD-----LDREALSLPTRAQPLPKPPD 233
>gi|284007875|emb|CBA73793.1| TolA protein [Arsenophonus nasoniae]
Length = 334
Score = 43.0 bits (99), Expect = 0.048, Method: Composition-based stats.
Identities = 23/224 (10%), Positives = 68/224 (30%), Gaps = 8/224 (3%)
Query: 47 EDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKG 106
+ + ++ + + + ++E + + QE + + K A K + +K
Sbjct: 117 AEQQRKQAEEAAKNAKEQQKIAEEAAAKAKAEQERLLKEQAEAKAKAEAQAKKEAEIAKV 176
Query: 107 EQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVE 166
+ + +K + A + ++ + T
Sbjct: 177 KAQAEAKEKAEKAAKALAAKKKADAAKQAAAVEDLLGGLTAQQPTQQTGGAAAAGEGGNR 236
Query: 167 KSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVG 226
KS + + ++ + + + + ++ ++ +L G ++
Sbjct: 237 KSGASSSDVANYQSKIQAAIQSKF---YNADIYRGKTCELSIKLAPDGMLISIAAKSSAA 293
Query: 227 GTELVRRMLRENARKAVIKSQAFRLSPSTYKSWRN--ITLFFVP 268
+ + A+ A++ S S Y ++ TL F P
Sbjct: 294 NDQSLCDAAIRAAKTAIM---PKPPSRSIYDAFNEQGSTLVFKP 334
Score = 35.6 bits (80), Expect = 7.3, Method: Composition-based stats.
Identities = 16/143 (11%), Positives = 45/143 (31%), Gaps = 1/143 (0%)
Query: 2 RLENGLAISMILHVMFLLLLYF-NFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP 60
+L + +S+ILHV+ + + N + + + VD I + + +
Sbjct: 10 KLSRSVVLSIILHVLLFSFIILGSLNEIIKLGGGGQGGEVVDAIMVDPGAVIEQYNQLQR 69
Query: 61 VVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPV 120
+ + QE + + + + + + E +
Sbjct: 70 QQTSAKQADAERKKRLQQQEEELQKQQEEQQKRLKMVEEERIKIEREAEQQRKQAEEAAK 129
Query: 121 SPYDKQKISKATNKEQDLQGISF 143
+ ++QKI++ + +
Sbjct: 130 NAKEQQKIAEEAAAKAKAEQERL 152
>gi|320354282|ref|YP_004195621.1| hypothetical protein Despr_2186 [Desulfobulbus propionicus DSM
2032]
gi|320122784|gb|ADW18330.1| hypothetical protein Despr_2186 [Desulfobulbus propionicus DSM
2032]
Length = 266
Score = 43.0 bits (99), Expect = 0.048, Method: Composition-based stats.
Identities = 19/215 (8%), Positives = 62/215 (28%), Gaps = 8/215 (3%)
Query: 58 EEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLR 117
++ + + K +++ + +Q+ + + + + + + L +
Sbjct: 55 QKKIEERKREAEQRKQEEQELQKKIEERKREAERKEVQRREDERKKALAQARLDQIRAEN 114
Query: 118 MPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQD 177
+ + A + + + ++ + +S +
Sbjct: 115 EAREAAAEARELAAQANAANAALAAARADAARKAASMQGAATGTTTGRAAASGIVAQTYG 174
Query: 178 AIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRE 237
A +R+ W +P L + +N+KG V+ G +
Sbjct: 175 KTAA--SRINEFWQLPDTRSWDNSLASNVVITINKKGEVVRIQFERRSGD-----PQFDQ 227
Query: 238 NARKAVIKSQAFRLSPSTY-KSWRNITLFFVPSKM 271
KA+ ++ P+ + + F ++
Sbjct: 228 LVEKAINRAVPMPPFPALMTEETTEVPCNFNVREL 262
>gi|319940524|ref|ZP_08014868.1| hypothetical protein HMPREF9464_00087 [Sutterella wadsworthensis
3_1_45B]
gi|319806052|gb|EFW02806.1| hypothetical protein HMPREF9464_00087 [Sutterella wadsworthensis
3_1_45B]
Length = 351
Score = 43.0 bits (99), Expect = 0.049, Method: Composition-based stats.
Identities = 25/259 (9%), Positives = 61/259 (23%), Gaps = 29/259 (11%)
Query: 26 NVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRF 85
+ + D + S E + + + +
Sbjct: 96 PKTEGETLDEPPKAAAAETSL-DSKPTPKAPELTSTQPTADSGDEQVKSAQA--KPILKR 152
Query: 86 SDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAE 145
+ + + + + + P +K S+ K+ + +S
Sbjct: 153 QNPQPQVSKNIKPVSKPKRENSEGKAYKGETQKPAPLKEKASASETDGKDGKTKHVSAGS 212
Query: 146 KKSIDTVVVRPDKKELLSKVEKSSRKRIP-----------------SQDAIAIVRNRVIA 188
++ K + + S + +
Sbjct: 213 GGAVGASGTADGKAQTEGSGVGDGQGTAFGSGNFIANGDGSYTALGSGGISYKILSEAAP 272
Query: 189 NWNIPSDFKRFKKL-RVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQ 247
+ + F K+ RV++ F + G V + + E +K +K
Sbjct: 273 RYPRAARSIGFNKVVRVRVKFLVGLDGQVETTEIITRNIPDLGFKEAAVEAVKK--MKFA 330
Query: 248 AFRLSPSTYKSWRNITLFF 266
Y RNI ++F
Sbjct: 331 PI------YHQGRNINVYF 343
Score = 42.6 bits (98), Expect = 0.068, Method: Composition-based stats.
Identities = 22/192 (11%), Positives = 45/192 (23%), Gaps = 20/192 (10%)
Query: 4 ENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDN------------------IY 45
++ L+ S+++H + + P+ ML+VD +
Sbjct: 9 QSALSASVVIHALLVG--GIGLIFFQSAPVGGSGMLTVDLGGPAGNAGGLGDMHRDGRLG 66
Query: 46 NEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSK 105
N K + E + + E D + + + +
Sbjct: 67 NGGAGGDGAKSHSKDRRLEPTDEPEKPLAPKTEGETLDEPPKAAAAETSLDSKPTPKAPE 126
Query: 106 GEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKV 165
+ V + I K N + + K K K
Sbjct: 127 LTSTQPTADSGDEQVKSAQAKPILKRQNPQPQVSKNIKPVSKPKRENSEGKAYKGETQKP 186
Query: 166 EKSSRKRIPSQD 177
K S+
Sbjct: 187 APLKEKASASET 198
>gi|262169176|ref|ZP_06036869.1| ferric siderophore transport system binding protein TonB [Vibrio
cholerae RC27]
gi|262022457|gb|EEY41165.1| ferric siderophore transport system binding protein TonB [Vibrio
cholerae RC27]
Length = 242
Score = 43.0 bits (99), Expect = 0.049, Method: Composition-based stats.
Identities = 19/197 (9%), Positives = 59/197 (29%), Gaps = 5/197 (2%)
Query: 9 ISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSS 68
+S+ H + L+ + P + V + + + + K +
Sbjct: 12 LSLAFHALLLITTDEAHAMPAGNPTQSVSINMVSMPKVAPAQPEQTQTEQSKLESVKPTP 71
Query: 69 QENLVRDFSVQENGDRFSDQT----KTHATENETKRSSSSKGEQALKESALLRMPVSPYD 124
+ +V+ + + + K E +S + + ++ +A + +P
Sbjct: 72 VQEVVKTPPAKPKVEPHKPKPQTVKKPVPAEQVPSKSVAKPQPEKVERTAEMAQKPAPTP 131
Query: 125 KQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRN 184
Q+ S+ T Q + K + +++ + + + + N
Sbjct: 132 NQQPSQPTAASQGITSQPILVDKPALVSAQVQPRYPRIARK-RGIEGTVMYEIWLDAQGN 190
Query: 185 RVIANWNIPSDFKRFKK 201
++ S + +
Sbjct: 191 QIKQQLLSSSGTEALDQ 207
>gi|154251600|ref|YP_001412424.1| TonB family protein [Parvibaculum lavamentivorans DS-1]
gi|154155550|gb|ABS62767.1| TonB family protein [Parvibaculum lavamentivorans DS-1]
Length = 279
Score = 43.0 bits (99), Expect = 0.049, Method: Composition-based stats.
Identities = 28/224 (12%), Positives = 61/224 (27%), Gaps = 26/224 (11%)
Query: 31 VPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTK 90
P E +SV+ + + + EP + + D
Sbjct: 61 PPFEEPEAISVELVQEPRQEEPQPEPQPEPQPEPAPEVPSAQRTFTRSGGDSDEPPGDPV 120
Query: 91 THATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSID 150
+ + + +EQ + I +
Sbjct: 121 EEEPADPAATEP-------------------DLQPDETTVEPREEQAAEDIPGWARTIEP 161
Query: 151 TVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQL 210
VR + + ++++R + + R++AN P + + V +
Sbjct: 162 GYDVRAGNPQATAAAKQATRGGGGGDAYLNAMGKRIVANVVYPREAAGRTGVIV-FDLVV 220
Query: 211 NQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAF-RLSP 253
++ G + + V G L A +A+ +SQ F P
Sbjct: 221 HRSGVIRQAVVVSSTG-----VPSLDRAATEALQRSQPFAPFPP 259
>gi|296162261|ref|ZP_06845056.1| TonB family protein [Burkholderia sp. Ch1-1]
gi|295887528|gb|EFG67351.1| TonB family protein [Burkholderia sp. Ch1-1]
Length = 153
Score = 43.0 bits (99), Expect = 0.049, Method: Composition-based stats.
Identities = 15/109 (13%), Positives = 29/109 (26%), Gaps = 18/109 (16%)
Query: 164 KVEKSSRKRIPSQDAIAIV-RNRVIANWNIPSDFKRFKKLR--VKMHFQLNQKGFVLGKI 220
++ R V R + N + LR V + F +++ G V+
Sbjct: 28 STPAAAINRAALDQYRDAVARRIIERNPSYVLRGTPQAMLRSLVVVSFTVDRNGRVVESS 87
Query: 221 NVDVVGGTELVRRMLRENARKAVIKSQAFRLSP----------STYKSW 259
G E A + ++ P ++ W
Sbjct: 88 VYRTNGDDE-----AESTALATLRRAAPLPQPPGRLLNGRGQLELFEDW 131
>gi|227328310|ref|ZP_03832334.1| TonB-like protein [Pectobacterium carotovorum subsp. carotovorum
WPP14]
Length = 293
Score = 43.0 bits (99), Expect = 0.049, Method: Composition-based stats.
Identities = 25/241 (10%), Positives = 58/241 (24%), Gaps = 25/241 (10%)
Query: 12 ILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQEN 71
++H LL PI+ + +I + + + I EP + + E
Sbjct: 56 LIHAGVAALLIT--RTTEYTPINLLNPAASISIQATMVEAPEPEPIPEPSPEPPVLTSEQ 113
Query: 72 LVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKA 131
R+ + +Q + K + + + +
Sbjct: 114 GEREIAPVPEKPVVEEQQTPPPPVKKEVHQPPVKPVVKPQPVRPKTIAERQPAARSTPEP 173
Query: 132 TNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWN 191
+ + + +S + Q R+ N
Sbjct: 174 SPAALEATPGPLTTASK----GNLMQNSPGAQPKQVASVGCVVPQPDYPRRAKRLQQEGN 229
Query: 192 IPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAV--IKSQAF 249
V + ++ +G ++ G L + A AV + +
Sbjct: 230 ------------VLVRLVISPEGRLIRHDIARSSG-----YDALDQAAIDAVAQARCTPY 272
Query: 250 R 250
R
Sbjct: 273 R 273
>gi|262198415|ref|YP_003269624.1| hypothetical protein Hoch_5246 [Haliangium ochraceum DSM 14365]
gi|262081762|gb|ACY17731.1| hypothetical protein Hoch_5246 [Haliangium ochraceum DSM 14365]
Length = 708
Score = 43.0 bits (99), Expect = 0.051, Method: Composition-based stats.
Identities = 17/143 (11%), Positives = 37/143 (25%), Gaps = 15/143 (10%)
Query: 121 SPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIA 180
+++ + +G ++++I + + + + P IA
Sbjct: 373 EDKAAEEVELGRRRMSGKRGRFARKQEAIRSALENFTPEVRTGNQTALKTRAAPFAVFIA 432
Query: 181 IVRNRVIANW--------NIPSDFKRFK--KLRVKMHFQLNQKGFVLGKINVDVVGGTEL 230
+ + W N L + +N G V V G
Sbjct: 433 RMHREIHPLWGFGFIEDLNDRPGNDPLNDWNLMTTLEIVVNSDGTVHKVNIVRNSG---- 488
Query: 231 VRRMLRENARKAVIKSQAFRLSP 253
R A V+ + + P
Sbjct: 489 -RLEFDVAAIDTVLTAGPYEPPP 510
>gi|270292169|ref|ZP_06198384.1| putative endo-beta-N-acetylglucosaminidase [Streptococcus sp. M143]
gi|270279697|gb|EFA25539.1| putative endo-beta-N-acetylglucosaminidase [Streptococcus sp. M143]
Length = 1593
Score = 43.0 bits (99), Expect = 0.051, Method: Composition-based stats.
Identities = 17/177 (9%), Positives = 34/177 (19%), Gaps = 10/177 (5%)
Query: 29 LLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQ 88
PIS D + ++ E Q + V E
Sbjct: 79 AEQPISENTPAITDLVNEKEEAKPALTDKTEKPAQPTEKEEVKPAEAPQVTEKKADKPTL 138
Query: 89 TKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKS 148
E ++ R K + N+ +
Sbjct: 139 ADVPKNEEKSLRPKEIKFDTWEDLLKWEPGAREDDP-------INRSSVELAKRHRGQLV 191
Query: 149 IDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVK 205
+ R + L + K+ + + W ++ L
Sbjct: 192 NEKASRRAKVQALANTNSKAKDHASVGGEE---FKAYAFDYWQYLDSMVFWEGLVPT 245
>gi|257465022|ref|ZP_05629393.1| colicin import membrane protein [Actinobacillus minor 202]
gi|257450682|gb|EEV24725.1| colicin import membrane protein [Actinobacillus minor 202]
Length = 172
Score = 43.0 bits (99), Expect = 0.051, Method: Composition-based stats.
Identities = 13/131 (9%), Positives = 42/131 (32%), Gaps = 12/131 (9%)
Query: 138 LQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFK 197
L G S + + K + + +++ ++ + + F
Sbjct: 47 LAGGDIGGGSSGGGNKNSAGSQGNGNSKGIGDGKGVADRGYEQLIKKKLARTYQVDPSFS 106
Query: 198 RFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSP--ST 255
+ ++ + + G + + G + + A A+ +++ +P T
Sbjct: 107 GRE---CRVKINIERDGRISSHQVI--SGPDD-----ICRAAVAAITRARDVPRAPNDET 156
Query: 256 YKSWRNITLFF 266
Y +++ + F
Sbjct: 157 YSKYQSPVIKF 167
>gi|260912912|ref|ZP_05919397.1| TolA colicin import membrane protein [Pasteurella dagmatis ATCC
43325]
gi|260632902|gb|EEX51068.1| TolA colicin import membrane protein [Pasteurella dagmatis ATCC
43325]
Length = 357
Score = 43.0 bits (99), Expect = 0.052, Method: Composition-based stats.
Identities = 23/156 (14%), Positives = 51/156 (32%), Gaps = 3/156 (1%)
Query: 5 NGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQF 64
+ + IS++LHV+ LL + + E + ++ Q
Sbjct: 11 SAVIISIVLHVILFGLLILGSLYHRVEIMGGGEGEGDVMGAVMVDTGAAAQEWGRLQQQK 70
Query: 65 KGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYD 124
KG + + + V+E D Q E E +++ + + ++ A + +
Sbjct: 71 KGQTDKPKKPEPVVEEKPD---QQEILRQQEIEKQKALEKQKDLERQKEAERQKQLLEQK 127
Query: 125 KQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKE 160
KQ+ + + A+ K + E
Sbjct: 128 KQEEKARLEALEKQKQAEEAKAKQAAEAARLKAEAE 163
>gi|304409843|ref|ZP_07391463.1| protein TolA [Shewanella baltica OS183]
gi|307304199|ref|ZP_07583952.1| protein TolA [Shewanella baltica BA175]
gi|304352361|gb|EFM16759.1| protein TolA [Shewanella baltica OS183]
gi|306913097|gb|EFN43520.1| protein TolA [Shewanella baltica BA175]
Length = 336
Score = 42.6 bits (98), Expect = 0.053, Method: Composition-based stats.
Identities = 26/236 (11%), Positives = 69/236 (29%), Gaps = 16/236 (6%)
Query: 40 SVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETK 99
++ + K ++ + + + +++ + D + E
Sbjct: 110 EIETQKANEAAKLAQVKQQQEKEKAVKAEADRKLKEQERKVAEDAAQKAAEKRKVEEAAA 169
Query: 100 RSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKK 159
+ + +Q E+ + K + D + + AE K+
Sbjct: 170 AKAETDRKQKEAEAKAKADKAKADAEAKAKAEAKAKADAKAKADAEAKARAQQEQEMADA 229
Query: 160 ELLS----KVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGF 215
+ + + A++++ + N + + + +L GF
Sbjct: 230 LAAEQAALSQTMNKQMQSEVGKYQAMIKSTIQRNLVVDESMRGK---TCTVSVRLANDGF 286
Query: 216 VLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPST--YKSWRNITLFFVPS 269
V+ G + A+ A++K+ +SP Y + I L P+
Sbjct: 287 VISSQ----TKGGDPNV---CRAAKAAILKAGKLPVSPDPAVYNLMKEINLIVEPT 335
>gi|288574441|ref|ZP_06392798.1| TonB family protein [Dethiosulfovibrio peptidovorans DSM 11002]
gi|288570182|gb|EFC91739.1| TonB family protein [Dethiosulfovibrio peptidovorans DSM 11002]
Length = 276
Score = 42.6 bits (98), Expect = 0.053, Method: Composition-based stats.
Identities = 29/259 (11%), Positives = 59/259 (22%), Gaps = 31/259 (11%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSS------------- 52
+A S+ILH L L+ +SV + S
Sbjct: 7 TIAASLILHAGLLFLI-----PWAPKESDSIGTISVKLVRTRSKTESAVGEDGGSAMAEI 61
Query: 53 ----KYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQ 108
+ P+ + + +T K + +
Sbjct: 62 PTERPKAEKAAPLKPTTSKEVDPPHTKEDSKIKTPEKPQKTVEKTKPVVKKTPVAKPRRE 121
Query: 109 ALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKS 168
++ + P K + E+ + A + E
Sbjct: 122 KTEKPKIEEKKDGPEKKVSLPPQKEDEKTTKSAGQAPPGKGQKEGTSQKEGPHKGDGEAK 181
Query: 169 SRKRIPSQDAIAIVRNRVIANWNIPSDF---KRFKKLRVKMHFQLNQKGFVLGKINVDVV 225
+ ++ V KR ++ V + + + G V+
Sbjct: 182 KPAASSRGEILSEHDVTVKHREIPEYPLISRKRKEQGTVTVLLSVKK-GRVIDTRIEKSS 240
Query: 226 GGTELVRRMLRENARKAVI 244
G L + A KA+
Sbjct: 241 GAPR-----LDKAALKALR 254
>gi|296444783|ref|ZP_06886746.1| TonB family protein [Methylosinus trichosporium OB3b]
gi|296257731|gb|EFH04795.1| TonB family protein [Methylosinus trichosporium OB3b]
Length = 240
Score = 42.6 bits (98), Expect = 0.054, Method: Composition-based stats.
Identities = 24/198 (12%), Positives = 57/198 (28%), Gaps = 13/198 (6%)
Query: 60 PVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMP 119
P + + E ++ + A E++ +R + + EQ E
Sbjct: 36 PPIDETLVVEFQGADSDVQAEEQNQQQNNGGDGADEDQNRRRAEAVEEQETAEPQHETAD 95
Query: 120 VSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAI 179
P ++ G + + E ++ + + +
Sbjct: 96 ALPAPSKQKEAGGASSSAPAGAPGSARIQGGEQQQSAQTIERSAERQMD-----ELRSYV 150
Query: 180 AIVRNRVIANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGK--INVDVVGGTELVRRMLR 236
+ ++ + P + +R + + F++ G + + V+ G E L
Sbjct: 151 RGLSKKIQSKLVYPKEGRRAGMQGVATVSFRIMADGAMQAQTLKIVESSGKAE-----LD 205
Query: 237 ENARKAVIKSQAFRLSPS 254
+A K V F P
Sbjct: 206 ASALKTVQLCSPFAPPPK 223
>gi|238919581|ref|YP_002933096.1| protein TonB [Edwardsiella ictaluri 93-146]
gi|238869150|gb|ACR68861.1| protein TonB [Edwardsiella ictaluri 93-146]
Length = 283
Score = 42.6 bits (98), Expect = 0.054, Method: Composition-based stats.
Identities = 25/246 (10%), Positives = 69/246 (28%), Gaps = 7/246 (2%)
Query: 2 RLENGLAISMILHVMFL-LLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP 60
RL + +S+ LH + LLY +++ P + + + + P
Sbjct: 16 RLSWPMTLSVSLHASLIAGLLYASYHEIRPQPAGDAGQIQAIMVNPAMFSVAGGAASVAP 75
Query: 61 VVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPV 120
++Q + ++ + K + + + + +E
Sbjct: 76 PAAAPPATQGTGLAQAALPSVPVPQEYKEKDAPSPERQQPRPNERTPPRKREVKPAPPKA 135
Query: 121 SPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIA 180
P + + + E + + K + + + + + A+
Sbjct: 136 QPPVQTRQATVAKVESPMPHAAMMPDKVQGAASKVTAESATGTLLNAAPQAAAGRSVAVG 195
Query: 181 IVRNRVIANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENA 239
+ P + RVK+ F ++ +G V + +
Sbjct: 196 APQAVSRPEPAYPQRALALHIEGRVKLRFDVDSEGRVGNVSILSAEPPG-----VFEREV 250
Query: 240 RKAVIK 245
++A +
Sbjct: 251 KRAARR 256
>gi|293603405|ref|ZP_06685832.1| proline-rich inner membrane protein [Achromobacter piechaudii ATCC
43553]
gi|292818178|gb|EFF77232.1| proline-rich inner membrane protein [Achromobacter piechaudii ATCC
43553]
Length = 381
Score = 42.6 bits (98), Expect = 0.055, Method: Composition-based stats.
Identities = 11/101 (10%), Positives = 25/101 (24%), Gaps = 7/101 (6%)
Query: 165 VEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFK-RFKKLRVKMHFQLNQKGFVLGKINVD 223
+++ A VR ++ + + QL G V G +
Sbjct: 281 ADRNQAGGGRDNGYAAKVRACILPGVAYQPPPRNGSANPTAQYRVQLGTDGKVNGVNLTE 340
Query: 224 VVGGTELVRRMLRENARKAVIKSQAFRLSPS-TYKSWRNIT 263
G + + F + Y + ++
Sbjct: 341 SSGN-----PAFDRAVETGIRRCNPFPKPSTGGYDKFIDVV 376
>gi|198283754|ref|YP_002220075.1| TonB family protein [Acidithiobacillus ferrooxidans ATCC 53993]
gi|218665882|ref|YP_002426385.1| TonB family protein [Acidithiobacillus ferrooxidans ATCC 23270]
gi|198248275|gb|ACH83868.1| TonB family protein [Acidithiobacillus ferrooxidans ATCC 53993]
gi|218518095|gb|ACK78681.1| TonB family protein [Acidithiobacillus ferrooxidans ATCC 23270]
Length = 275
Score = 42.6 bits (98), Expect = 0.055, Method: Composition-based stats.
Identities = 16/191 (8%), Positives = 43/191 (22%), Gaps = 7/191 (3%)
Query: 59 EPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRM 118
+ + + + Q + A
Sbjct: 60 KTFEIMPKPIRPQAPSPTMPRVLPPSRPLAAPHRIVPAARPQPKPRVVPQPRRAPAPAHP 119
Query: 119 PVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDA 178
+ + + ++ + V + + K +
Sbjct: 120 LSRQMTPETTQASPSTQRQPLPHISIGRLEEQMDQVARAATASPPLPKFENPKGPVADFY 179
Query: 179 IAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLREN 238
IA ++ ++ + +L+V LN +G + I G + L
Sbjct: 180 IAGWIQKLERIGDLNYPGEMVGQLKV--KVVLNPQGNLQRIIMEQSSGN-----KALDAA 232
Query: 239 ARKAVIKSQAF 249
A + + S +
Sbjct: 233 AEQIIRLSFPY 243
>gi|258592656|emb|CBE68965.1| putative Protein tonB2 [NC10 bacterium 'Dutch sediment']
Length = 290
Score = 42.6 bits (98), Expect = 0.056, Method: Composition-based stats.
Identities = 30/263 (11%), Positives = 63/263 (23%), Gaps = 32/263 (12%)
Query: 7 LAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSS----KYKKIEEPVV 62
L S++LHV L+ L ++ ++ + + + K
Sbjct: 10 LFASLLLHVAGLVTARLT---ALSSDTPVPTLIPIEVVTVQSTPPAPLLRPKSKPPAVRE 66
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
E ++Q + + + + + + + A P P
Sbjct: 67 ITPSRPIEQPPSPPAIQSSAELPPLPQELPPSLPPPSPTQVEEPQPAPVIPLPATEPTDP 126
Query: 123 Y-------------------DKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLS 163
+ + + P K L
Sbjct: 127 PGNVMGPVAVTGSQAVPSSAPAEGGEAGAGQLFAKGDTAVLPGAGAGGGSGGPGKSGLGL 186
Query: 164 KVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKINV 222
+ + K Q +A +R P +R + + + G V +
Sbjct: 187 GMTDTGAKVTGLQLGVARLRGGYQIKPRYPESARRQGIQGTSLLRLHVLADGAVGEVLVE 246
Query: 223 DVVGGTELVRRMLRENARKAVIK 245
G + L A +AV K
Sbjct: 247 RSAGHPD-----LDRAAVRAVKK 264
>gi|300775928|ref|ZP_07085788.1| TonB family protein [Chryseobacterium gleum ATCC 35910]
gi|300505478|gb|EFK36616.1| TonB family protein [Chryseobacterium gleum ATCC 35910]
Length = 280
Score = 42.6 bits (98), Expect = 0.056, Method: Composition-based stats.
Identities = 17/202 (8%), Positives = 54/202 (26%), Gaps = 8/202 (3%)
Query: 44 IYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSS 103
+ ++ + ++++ +V +E+ + + +E K +
Sbjct: 60 LTIKNLTAPPKQEVKADLVDII---EEDPIIEQPKEEEPPPPPPPPKEEEKIEVIQNVVP 116
Query: 104 SKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLS 163
+ E+ + + + + K +
Sbjct: 117 EPVKAPKIETPPPPISKQLETTTGLQNQEGVKAPAYTPPPPPPSTGTKASTVEVKANNPN 176
Query: 164 KVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVD 223
++ K + + +R + N++ L+ K+ F + + G V +
Sbjct: 177 EIYKDVDQSAEYPGGMGALRKFLGDNFDTSLMEGGEGTLKAKLKFVVEKDGTVSNVTIEE 236
Query: 224 VVGGTELVRRMLRENARKAVIK 245
+ A + V K
Sbjct: 237 KSPNGD-----FNSEAVRVVKK 253
>gi|220932016|ref|YP_002508924.1| TonB family protein [Halothermothrix orenii H 168]
gi|219993326|gb|ACL69929.1| TonB family protein [Halothermothrix orenii H 168]
Length = 314
Score = 42.6 bits (98), Expect = 0.057, Method: Composition-based stats.
Identities = 20/168 (11%), Positives = 60/168 (35%), Gaps = 4/168 (2%)
Query: 7 LAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKY--KKIEEPVVQF 64
+ IS ++H+ + ++F ++ + + ++ + K +
Sbjct: 14 IIISSLIHLGII--MFFTMGNYSVLGGKGETRHDFEFVQVVEFKNEVRHVKPETTIKPER 71
Query: 65 KGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYD 124
K + QE +D +++ N +T+ N+T S S + ++++ +
Sbjct: 72 KDNRQEKPAKDENIENNEKIAETETEEQPVNNKTSESKSREENSITDKNSVKDNHNKNPE 131
Query: 125 KQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKR 172
K I ++ +++ + + D E++S + +
Sbjct: 132 KTDIDDNVKQQNEVKDSIDSPETRNDKSSKGNKNNEIISSEKSDMEVK 179
>gi|299530558|ref|ZP_07043978.1| TonB family protein [Comamonas testosteroni S44]
gi|298721534|gb|EFI62471.1| TonB family protein [Comamonas testosteroni S44]
Length = 384
Score = 42.6 bits (98), Expect = 0.057, Method: Composition-based stats.
Identities = 19/118 (16%), Positives = 31/118 (26%), Gaps = 8/118 (6%)
Query: 153 VVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQ 212
+ + SS PS A V RV N P R ++ +
Sbjct: 275 SDQAGSGGSRTGGAGSSASGGPSAGYAAKVAARVKPNIVYPDAVSG--NPRAEVRVRTAP 332
Query: 213 KGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPSTYKSWRNITLFFVPSK 270
G + G E +A+ K+ K ++ + F P
Sbjct: 333 DGTITSATISKSSGNA-----AWDEAVVRALHKTDKLPRDIDG-KVPSDLVIGFRPQD 384
>gi|299134913|ref|ZP_07028105.1| TonB family protein [Afipia sp. 1NLS2]
gi|298590723|gb|EFI50926.1| TonB family protein [Afipia sp. 1NLS2]
Length = 265
Score = 42.6 bits (98), Expect = 0.057, Method: Composition-based stats.
Identities = 19/233 (8%), Positives = 61/233 (26%), Gaps = 23/233 (9%)
Query: 14 HVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLV 73
H + + + V + +G + +
Sbjct: 26 HGAVAAIAVTSLTDTADDDELGAAGIEVGL----------------EFLAPRGEATDLPP 69
Query: 74 RDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATN 133
+ + K + + + + E + + + D ++
Sbjct: 70 GPDTEASAASPQVVEQKAEVKKTDLPQDKPIESENPDRVVSPDKSTDPKEDDPNVAARQQ 129
Query: 134 KEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIP 193
+ A + D+ L++ +S K+ + + + P
Sbjct: 130 APSQESVAAEATAMPTSESAQQSDRSVTLAQGTGAS-KQRIKTTWQKELVAHLDHHKRYP 188
Query: 194 SDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKS 246
+D +++ + F++++ G ++ V G + A + +S
Sbjct: 189 ADRSDV-SVKIMVSFEIDRTGHIISSTIVQGSG-----YPEFDQAALAMLKRS 235
>gi|92117070|ref|YP_576799.1| TonB-like [Nitrobacter hamburgensis X14]
gi|91799964|gb|ABE62339.1| outer membrane transport energization protein TonB [Nitrobacter
hamburgensis X14]
Length = 264
Score = 42.6 bits (98), Expect = 0.057, Method: Composition-based stats.
Identities = 23/233 (9%), Positives = 55/233 (23%), Gaps = 23/233 (9%)
Query: 14 HVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLV 73
H+ + L + + V + + + + L
Sbjct: 26 HLGCVALAMAHMQSDESDEDLGAPAIEVGLDLSSPHREATDLPPGPDT--DASVASPALA 83
Query: 74 RDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATN 133
+V + D D + + SK D + +
Sbjct: 84 EQKAVVKETDLPKDTPTETEDPDRIVTENESKKPV--------------DDDPEKAAVQT 129
Query: 134 KEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIP 193
+ A ++ + +S R + + +
Sbjct: 130 SASQESVAAEATAMPSVEHAPESERSVAPQQGTGAS-ARRIRATWQKELVAHLDKHKRY- 187
Query: 194 SDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKS 246
+ K + ++F L++ G V+ V G + + A V +S
Sbjct: 188 PSERSLKSAEILVNFVLDRLGHVVSATVVKGSGD-----PIFDKAALAMVHRS 235
>gi|288940101|ref|YP_003442341.1| TonB family protein [Allochromatium vinosum DSM 180]
gi|288895473|gb|ADC61309.1| TonB family protein [Allochromatium vinosum DSM 180]
Length = 299
Score = 42.6 bits (98), Expect = 0.058, Method: Composition-based stats.
Identities = 22/238 (9%), Positives = 62/238 (26%), Gaps = 26/238 (10%)
Query: 29 LLVPISRREMLSV----------DNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSV 78
P +R + + D ++ SS + +
Sbjct: 40 STEPEARPLVFELVRPGADEAATDEPPHDHRPSSPETASVPSASANDDAMPVPPAPVQTP 99
Query: 79 QENG----------DRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKI 128
+ + +T T + + + + P +++
Sbjct: 100 ARSPVDPVAFASRATKPVPKTSQRPTRPVRSDPTPKQADPPPASAPRSTQASEPRNQRPR 159
Query: 129 SKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIA 188
+T + A V P + + E ++ +R + + ++ +
Sbjct: 160 PPSTRHSAATGSATEAASARNSASPVSPGRTQTTQPGESAAGQRAAERAYLTALQRAIAR 219
Query: 189 NWNIPSDFKR-FKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIK 245
+ P+ +R + + F + G + G L + A +A+ +
Sbjct: 220 HQRYPAGARRHGQTGVTTLAFVIEADGRIGQIRLAQSSGHAS-----LDQAALQALTR 272
>gi|322515158|ref|ZP_08068161.1| siderophore-mediated iron transport protein TonB [Actinobacillus
ureae ATCC 25976]
gi|322118872|gb|EFX91062.1| siderophore-mediated iron transport protein TonB [Actinobacillus
ureae ATCC 25976]
Length = 289
Score = 42.6 bits (98), Expect = 0.058, Method: Composition-based stats.
Identities = 33/288 (11%), Positives = 74/288 (25%), Gaps = 31/288 (10%)
Query: 4 ENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQ 63
GL S+++H ++S++ + EE Q
Sbjct: 7 RIGLVSSIVIHTFIFAGFISIVKSSHSDGQPEDNVMSMELF-AALLEQPQVAVAEEQPTQ 65
Query: 64 FKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPY 123
+ Q+ E + ++ E+ ++
Sbjct: 66 AEPEKQQAEPEPEPEAEPIPEAEPIPEPKPQPKPKEKPKEKPKEKLKEQPKPKEKEKPKK 125
Query: 124 DKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQD------ 177
+K K E+ + K+I V + + + + S +
Sbjct: 126 EKAKDKPIKALEKGPEAKQGIVAKAIPNTVQGTQARAGIPNGKPNGNPNGISANGFSNGA 185
Query: 178 ---------------AIAIVRNRVIANWNIPSDFKRF---KKLRVKMHFQLNQKGFVLGK 219
A ++ + N + K V + F ++ G +
Sbjct: 186 AGGSGSGSSGSEIGAYKAALQRALQRRANNAYPAREKMMRKTGVVTIGFTISPSGDLTNV 245
Query: 220 INVDVVGGTELVRRMLRENARKAVIKSQAFRLSPSTYKSWRNITLFFV 267
++ G + L A KA +S P+ + S + + F
Sbjct: 246 KVLNSSGNS-----TLDNAAVKA-AQSTKVSPPPAGFPSSVTVPVKFS 287
>gi|262394685|ref|YP_003286539.1| TolA protein [Vibrio sp. Ex25]
gi|262338279|gb|ACY52074.1| TolA protein [Vibrio sp. Ex25]
Length = 354
Score = 42.6 bits (98), Expect = 0.059, Method: Composition-based stats.
Identities = 20/166 (12%), Positives = 64/166 (38%), Gaps = 1/166 (0%)
Query: 5 NGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQF 64
+AIS+ LH + ++ L + + + P +M+ + + + K+I + +
Sbjct: 13 KPIAISVGLHAILVVALLWGTDFNMSKPEPTGQMVQA-VVIDPKLVQQQAKEIRQQREKA 71
Query: 65 KGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYD 124
QE L + E ++ + + + +++ ++ + + + + +
Sbjct: 72 AKKEQERLDKLRREAEQLEKNRKAEEEQIRKLKEQQAKDAQAAREAEAARKKKEQERKQE 131
Query: 125 KQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSR 170
++++ K + L+ A+++++ KE + R
Sbjct: 132 EERVRKEKERAAKLEKERKAKEEAVRKAEQERLVKEAAIAKAEQER 177
>gi|322420659|ref|YP_004199882.1| hypothetical protein GM18_3167 [Geobacter sp. M18]
gi|320127046|gb|ADW14606.1| hypothetical protein GM18_3167 [Geobacter sp. M18]
Length = 231
Score = 42.6 bits (98), Expect = 0.060, Method: Composition-based stats.
Identities = 12/114 (10%), Positives = 36/114 (31%), Gaps = 3/114 (2%)
Query: 5 NGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQF 64
+ +S ILH++ + ++ P+ R + V+ + + +
Sbjct: 4 SPFILSAILHLVIGSAI---WHYSGTKPVPRPPIFYVELAGIDASLAQPVPPAPQAEPPR 60
Query: 65 KGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRM 118
+ E + +V E S+ + + S+ +++ +
Sbjct: 61 ELVGHEPAQPEPAVSEQEVAQSEPPASKQEVAQAAAGVPSEVPAEPQQAQVAPE 114
>gi|92116344|ref|YP_576073.1| TonB-like [Nitrobacter hamburgensis X14]
gi|91799238|gb|ABE61613.1| outer membrane transport energization protein TonB [Nitrobacter
hamburgensis X14]
Length = 225
Score = 42.6 bits (98), Expect = 0.060, Method: Composition-based stats.
Identities = 22/184 (11%), Positives = 50/184 (27%), Gaps = 7/184 (3%)
Query: 72 LVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKA 131
D + + + T A E ++ + + P P +
Sbjct: 34 PPPDDAEVLVVELQGMVSDTQAEEKVAQQPDQPQQQPQPAPPPQEAPPPEPQEDDGARPP 93
Query: 132 TNKEQDLQGISFAEKKSIDTVVVRPDKKELLS-KVEKSSRKRIPSQDAIAIVRNRVIANW 190
+ Q V PD+++ + + + + + +V A+
Sbjct: 94 EPQPQVSSPPQQPVPPPQARQVQDPDEQQKAQVLKAEQDLEADHLRKYVKRLTKKVQAHL 153
Query: 191 NIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFR 250
P++ ++ + F L G V V + L +A + + F
Sbjct: 154 VYPNEGRKGN---ATVSFTLTPDGQVKPGTLAIAVSSGQPK---LDASALQTIRACAPFH 207
Query: 251 LSPS 254
P
Sbjct: 208 PPPE 211
>gi|291534052|emb|CBL07165.1| Gram-negative bacterial tonB protein [Megamonas hypermegale
ART12/1]
Length = 248
Score = 42.6 bits (98), Expect = 0.061, Method: Composition-based stats.
Identities = 30/234 (12%), Positives = 69/234 (29%), Gaps = 16/234 (6%)
Query: 26 NVQLLVPISRREMLSVDNIYNEDYHSSKYKKI-------EEPVVQFKGSSQENLVRDFSV 78
+ + E+++V+ + + +K + + S +N +
Sbjct: 4 GFHQEIQRPKEELITVNLADTPEQIAKAQEKSSFNSFSRDIENIFKHNSDNDNQNIENKN 63
Query: 79 QENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDL 138
E + + + ++ S + L S + +S D Q IS +
Sbjct: 64 NEVNQNKDIKQINNVENKQIEKDEISAEDGILPASNNMTNTISEDDTQAISGGIGQGDGE 123
Query: 139 QGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVR--NRVIANWNIPS-D 195
K S + + + R + R V + + P
Sbjct: 124 NFSGSENKNSGSGSGGTIEGMAGGDNEKANGRANVTEDRYSVASRFAQAVENHKSYPYAS 183
Query: 196 FKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAF 249
+ ++ V ++ ++ G ++ V V G L + A AV + F
Sbjct: 184 VRLNQQGTVIINVTIDASGNLISAGVVSSVNGN------LDKAALNAVYSACPF 231
>gi|327301363|ref|XP_003235374.1| hypothetical protein TERG_04429 [Trichophyton rubrum CBS 118892]
gi|326462726|gb|EGD88179.1| hypothetical protein TERG_04429 [Trichophyton rubrum CBS 118892]
Length = 1451
Score = 42.6 bits (98), Expect = 0.062, Method: Composition-based stats.
Identities = 20/162 (12%), Positives = 51/162 (31%), Gaps = 3/162 (1%)
Query: 22 YFNFNVQLLVPISRREMLSVDNIYNEDYHS---SKYKKIEEPVVQFKGSSQENLVRDFSV 78
YF+ + P E +++ ++ + +Q ++ + D S
Sbjct: 936 YFSIPEFVTPPPVPNETDMKEDLPAPPSQPLVENEEQPQPAQEIQPSSQDEDVEMNDASP 995
Query: 79 QENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDL 138
+E + + +E S+ E + ++A + + + + +A EQ
Sbjct: 996 EEAPTQPNQNRDEPEHPSEHIPSAPELPEHEMSDNAPEQPGTNGIEPTSVPEAQTDEQAA 1055
Query: 139 QGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIA 180
A + D ++ ++ S + P I
Sbjct: 1056 NEAIIASIIAQDLALLDQSQEMDTSGSFTEANGISPPPPMID 1097
>gi|15605996|ref|NP_213373.1| hypothetical protein aq_531 [Aquifex aeolicus VF5]
gi|2983175|gb|AAC06776.1| putative protein [Aquifex aeolicus VF5]
Length = 262
Score = 42.6 bits (98), Expect = 0.063, Method: Composition-based stats.
Identities = 32/253 (12%), Positives = 73/253 (28%), Gaps = 14/253 (5%)
Query: 6 GLAISMILHVMFLL-LLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQF 64
G +S +LH L L + V+ LS+ + + I++ +
Sbjct: 9 GYLLSGLLHGALLFSLTHAGLEVREQK-SKEPVGLSLKTLQIKKEEPKTVSTIKKSEKKT 67
Query: 65 KGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYD 124
Q+ + + + + + K + + + + + +
Sbjct: 68 IKKEQKVVKKPKKTFKKKYKKRHRRKIVKPKKYAVKKIHKTEKVKNVIAQKPKKVTKLTE 127
Query: 125 KQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRN 184
K+ I + + + ++K + S K+ + +RN
Sbjct: 128 KKVIHENNLGLHGKTNVLEGSPVKRINTYEQI----TVAKKTEFSYKKEFLKINFEKIRN 183
Query: 185 RVIANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAV 243
V P +R + +V + L++KG G ++L NA + V
Sbjct: 184 YVQERIKYPYIARRMGWEGKVILEIILSEKG-CESVRVAHSSG-----HKVLDRNAVETV 237
Query: 244 I-KSQAFRLSPST 255
F
Sbjct: 238 KALCGKFPKPREK 250
>gi|183600944|ref|ZP_02962437.1| hypothetical protein PROSTU_04555 [Providencia stuartii ATCC 25827]
gi|188019272|gb|EDU57312.1| hypothetical protein PROSTU_04555 [Providencia stuartii ATCC 25827]
Length = 260
Score = 42.6 bits (98), Expect = 0.063, Method: Composition-based stats.
Identities = 29/245 (11%), Positives = 63/245 (25%), Gaps = 33/245 (13%)
Query: 14 HVMFLLLLYFNFNVQLLVPISRREMLSVDN--IYNEDYHSSKYKKIEEPVVQFKGSSQEN 71
H ++ F + +S+ E + + + +
Sbjct: 26 HGTLAVIFIGWFTASIPTTGVLPPAISLQLGVYQLEQHSEPEVNHAAKQQMATHEEVLPE 85
Query: 72 LVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKA 131
LV ++ T T +E + + + E A L S
Sbjct: 86 LVEKTEKLPETPLVNNGTLTKVSEKKHPPKKKPTQVKKVVEEAPLSTQESAV-------- 137
Query: 132 TNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWN 191
+ + +S Q + V R+
Sbjct: 138 -----------------TSAPAAGSEASSSANFSSNASVAVSGHQGWHSEVHQRLAKAKR 180
Query: 192 IPSDFKRFKKLRV-KMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFR 250
P RF+ V ++ ++ G V+ ++ G ++L + A + ++ F
Sbjct: 181 YPRAALRFRSTGVSQVKVMVDSHGEVISASLINSSGT-----KLLDKEAIATINRAAPFP 235
Query: 251 LSPST 255
P T
Sbjct: 236 APPET 240
>gi|323495162|ref|ZP_08100247.1| TolA protein [Vibrio brasiliensis LMG 20546]
gi|323310602|gb|EGA63781.1| TolA protein [Vibrio brasiliensis LMG 20546]
Length = 355
Score = 42.6 bits (98), Expect = 0.064, Method: Composition-based stats.
Identities = 17/164 (10%), Positives = 57/164 (34%), Gaps = 4/164 (2%)
Query: 7 LAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKG 66
+ IS LH + ++ L + + + P +M+ + + + + ++I +
Sbjct: 15 IVISAALHALLIVALIWGTDFTMSKPEPAGKMVQA-VVIDPNLVRQQAQQIRSQREEAAK 73
Query: 67 SSQ---ENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPY 123
Q + L R+ E + ++ E + K + +++ + + +
Sbjct: 74 KEQDRLDKLRRESEQLEKNRKAEEERIRKLKEQQAKEAKAAREAEKRRIAKEKERKAEEQ 133
Query: 124 DKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEK 167
++ + K + + K + + + ++ E+
Sbjct: 134 RAKREKERVAKLEQERKAKEQAIKKAEQERLAKEAAIAKAEQER 177
>gi|239906029|ref|YP_002952768.1| hypothetical protein DMR_13910 [Desulfovibrio magneticus RS-1]
gi|239795893|dbj|BAH74882.1| hypothetical protein [Desulfovibrio magneticus RS-1]
Length = 406
Score = 42.6 bits (98), Expect = 0.064, Method: Composition-based stats.
Identities = 18/181 (9%), Positives = 46/181 (25%), Gaps = 1/181 (0%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
G S+ LH+ +L +++ + + VD + ++ P+
Sbjct: 5 GWIFSIFLHLTVVLASLLFVSIEPVKFQLNVPVYEVDLVSLAP-PGLPPGEVGLPLGPKG 63
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
+ L G + A T A P +
Sbjct: 64 PGERPELGPAEPEGGPGAAAKETLPEPAEAPATPAKPIPPEPVAAVPEPPQPKRHEPEPE 123
Query: 126 QKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNR 185
K + + + + +++ P + + R + A + +
Sbjct: 124 PKKPEPKPEPKKPEAKPIPTEQAKPEPKPEPKLEPKPDFKKIEEATRKAEELKKAEEQKK 183
Query: 186 V 186
+
Sbjct: 184 I 184
>gi|220905347|ref|YP_002480659.1| TonB family protein [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
gi|219869646|gb|ACL49981.1| TonB family protein [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
Length = 319
Score = 42.6 bits (98), Expect = 0.064, Method: Composition-based stats.
Identities = 25/238 (10%), Positives = 52/238 (21%), Gaps = 18/238 (7%)
Query: 6 GLAISMILHVMFL-LLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQF 64
GLA S+ LH +FL LL +F P + ++V + P
Sbjct: 72 GLAASLFLHAIFLSALLGLSFQAVQNAPGN---AIAVSLMRLGAAPVPATGTTGLPADAP 128
Query: 65 KGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYD 124
+ + + T ++++ + + +
Sbjct: 129 PPLAAPVQPEPAAAERQPAAPPPTADTRPKTVSPQKTALASAGTNKRTTPPSAPEKHQSA 188
Query: 125 KQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRN 184
+ + + D K + S
Sbjct: 189 TPPAATPVQASTGGAAADASASSATDAATAAGADKVYSPRQLDQSPAVTKGVRPE----- 243
Query: 185 RVIANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARK 241
P + K + RV + + G + AR+
Sbjct: 244 -------YPPSARSRKVEGRVIVRMVVETSGQPGQCSI-HSATPQGYFEEAALDAARR 293
>gi|330977357|gb|EGH77307.1| TonB [Pseudomonas syringae pv. aptata str. DSM 50252]
Length = 149
Score = 42.6 bits (98), Expect = 0.065, Method: Composition-based stats.
Identities = 14/114 (12%), Positives = 32/114 (28%), Gaps = 6/114 (5%)
Query: 142 SFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFK- 200
+ + +P K S + + + P D +R
Sbjct: 20 ADEKPVDTPPTTAQPAKPVAPKPAPAPSPPSNALPNWQGDLLGHLSKYKKYPEDARRRGM 79
Query: 201 KLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPS 254
+ ++ F ++ G VL + G + L + + ++Q P
Sbjct: 80 QGVARLRFVVDADGNVLSYSIANSSGSS-----ALDRATMEMIRRAQPLPKPPK 128
>gi|90423235|ref|YP_531605.1| hypothetical protein RPC_1727 [Rhodopseudomonas palustris BisB18]
gi|90105249|gb|ABD87286.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB18]
Length = 862
Score = 42.6 bits (98), Expect = 0.065, Method: Composition-based stats.
Identities = 23/244 (9%), Positives = 56/244 (22%), Gaps = 7/244 (2%)
Query: 4 ENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQ 63
G+ IL + L L F PI+ R D V
Sbjct: 451 RVGIVGGTIL-IAVLGLPLLYFLHFDFNPINLRNPKVESIATFLDLRKDPNAGANAVNVM 509
Query: 64 FKGSSQENLVRDFSVQENGDRFSDQTKT---HATENETKRSSSSKGEQALKESALLRMPV 120
V + +Q+ + + + + +
Sbjct: 510 APSVEAAKQV-EAKLQKLPQVLRTMSLDSFVPDDQPAKLKLIHDGAKILNPALNPDSVDP 568
Query: 121 SPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIA 180
+P D + ++ + +L+ + + R + + +A
Sbjct: 569 APSDAENVAALQSTADNLRKTAGEQTGPGAQASRRLADALGKLVAADQATRDKVQTVFVA 628
Query: 181 IVRNRVIANWNIPSDFK-RFKKLRVK-MHFQLNQKGFVLGKINVDVVGGTELVRRMLREN 238
++ + ++ + L + + G V ++ R
Sbjct: 629 PLQLALEQLRSLLQAAPVTVQNLPASLVSAWTTKDGQVRVQVLPQGDPNDNDTLRAFAGA 688
Query: 239 ARKA 242
A
Sbjct: 689 VLSA 692
>gi|67479649|ref|XP_655206.1| calponin homology domain protein [Entamoeba histolytica HM-1:IMSS]
gi|56472327|gb|EAL49820.1| calponin homology domain protein, putative [Entamoeba histolytica
HM-1:IMSS]
Length = 457
Score = 42.6 bits (98), Expect = 0.065, Method: Composition-based stats.
Identities = 13/151 (8%), Positives = 44/151 (29%), Gaps = 1/151 (0%)
Query: 11 MILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQE 70
++ H + + F F + ++ ++ +D + + + + + + +E
Sbjct: 215 VLAHTVDFRVFCFYFEFLMNAFKNKSSVIQIDLVQLV-QQAFEQLSKQTNQEKKQSKEEE 273
Query: 71 NLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISK 130
L ++ + + + S + + K +
Sbjct: 274 VLTNQINLPPKQPKKKCASVSSQKVVPISSPSIQTKSEVNQHPQEQNSFKPIVLKDVMQH 333
Query: 131 ATNKEQDLQGISFAEKKSIDTVVVRPDKKEL 161
KE + IS K + ++ ++
Sbjct: 334 GRVKECIDEPISKTFNKKNEENSLKITSEKT 364
>gi|227114382|ref|ZP_03828038.1| TonB-like protein [Pectobacterium carotovorum subsp. brasiliensis
PBR1692]
Length = 293
Score = 42.6 bits (98), Expect = 0.066, Method: Composition-based stats.
Identities = 28/241 (11%), Positives = 62/241 (25%), Gaps = 25/241 (10%)
Query: 12 ILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQEN 71
++H LL PI+ + +I + + + I EP + + E
Sbjct: 56 LIHAGVAALLIT--RTTEYTPINLLNPAASISIQATMVEAPEPESIPEPSPEPPVLTSEQ 113
Query: 72 LVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKA 131
R+ + Q T + K + + +S+
Sbjct: 114 GEREIAPVPEKPVVEKQQTPPPTVKKEVHQPPVKPVVKPQPVRPKTTAERQPAARPVSEP 173
Query: 132 TNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWN 191
++ + + + +S I Q R+ N
Sbjct: 174 SSTTPEATPVPQTTASK----GNLMQNSPGAQPKQVASVGCIVPQPDYPRRAKRLQQEGN 229
Query: 192 IPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAV--IKSQAF 249
V + ++ +G ++ G L + A +AV + +
Sbjct: 230 ------------VLVRLVISPEGRLIRHDIARSSG-----YDALDQAAIEAVAQARCTPY 272
Query: 250 R 250
R
Sbjct: 273 R 273
>gi|172059919|ref|YP_001807571.1| TonB family protein [Burkholderia ambifaria MC40-6]
gi|171992436|gb|ACB63355.1| TonB family protein [Burkholderia ambifaria MC40-6]
Length = 142
Score = 42.6 bits (98), Expect = 0.067, Method: Composition-based stats.
Identities = 12/83 (14%), Positives = 26/83 (31%), Gaps = 11/83 (13%)
Query: 179 IAIVRNRVIANWNIPSDFKRFKKLR------VKMHFQLNQKGFVLGKINVDVVGGTELVR 232
+A R V + + + V + F +++ G ++ G +E
Sbjct: 29 LAQYRVEVARCVAEHNPSAVSRGPQAMLRSLVVVSFTVDRGGRLVNASVYRSNGDSEAEA 88
Query: 233 RMLRENARKAVIKSQAFRLSPST 255
L + +S + PS
Sbjct: 89 LALAS-----LRRSAPLPVPPSK 106
>gi|118579673|ref|YP_900923.1| TonB family protein [Pelobacter propionicus DSM 2379]
gi|118502383|gb|ABK98865.1| outer membrane transport energization protein TonB [Pelobacter
propionicus DSM 2379]
Length = 267
Score = 42.6 bits (98), Expect = 0.067, Method: Composition-based stats.
Identities = 24/244 (9%), Positives = 65/244 (26%), Gaps = 29/244 (11%)
Query: 7 LAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKG 66
S+I H++ + + + R ++ V+ + +E +
Sbjct: 29 FGASLIAHLLLFS-GFVALQMNVNAAPHRSPLIEVEL-----------RDMEMKKMDAPP 76
Query: 67 SSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQ 126
+ V + +R + + ++ PV+
Sbjct: 77 LAGPRTVSRPASAPTMERPAPSRPITERSTPKPETVPVPLATQPASASADATPVAASSAP 136
Query: 127 KISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRV 186
+S + + ++ + RV
Sbjct: 137 AVSVPAGATAGGSTGGVGPVAAGNGGGGGSGGIRDVAFGGANGPS----------FLARV 186
Query: 187 IANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKS 246
+ N+ + + + +V + L+++G +L ++ G + A AV KS
Sbjct: 187 LPNYPLAARRMGREG-KVLLRLTLDERGKLLHVDVLENPGYG------FADAALDAVRKS 239
Query: 247 QAFR 250
+
Sbjct: 240 RFLP 243
>gi|333029289|ref|ZP_08457350.1| TonB family protein [Bacteroides coprosuis DSM 18011]
gi|332739886|gb|EGJ70368.1| TonB family protein [Bacteroides coprosuis DSM 18011]
Length = 289
Score = 42.2 bits (97), Expect = 0.068, Method: Composition-based stats.
Identities = 29/247 (11%), Positives = 66/247 (26%), Gaps = 19/247 (7%)
Query: 6 GLAISMILHVMFLLLLY-FNFNVQLLVPISRREM-----------------LSVDNIYNE 47
G ++++H++ + L F + S + + VD + E
Sbjct: 11 GAIGAILVHLLLIGFLVWFTIVIPEPDEESGVPILMGQVDYAIGGERVDHYVDVDVLPEE 70
Query: 48 DYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGE 107
+ EE + E V +E + A E + K + E
Sbjct: 71 PKVEPIPVETEEIKQELITQDVEETVALEPKKEKEKPKEKTPEELAVEAKKKEQERLERE 130
Query: 108 QALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEK 167
+ E A R +QK ++ + + + K
Sbjct: 131 RKEAEEAKKREEQRIAKEQKAAEEAARRRVAGAFGKGAQMDGTNTASEKVKNAFDGIPST 190
Query: 168 SSRKRIPSQ-DAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVG 226
++ S + + + ++ +V + +N +G V+ +
Sbjct: 191 ATSSSGQSGYGTFDLGGRSIGKGGLPRPVYDVPEEGKVVVTITVNPEGKVISTSINKLTN 250
Query: 227 GTELVRR 233
R
Sbjct: 251 TVSPQLR 257
>gi|293346079|ref|XP_001065955.2| PREDICTED: titin [Rattus norvegicus]
Length = 33365
Score = 42.2 bits (97), Expect = 0.069, Method: Composition-based stats.
Identities = 14/128 (10%), Positives = 34/128 (26%), Gaps = 2/128 (1%)
Query: 28 QLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRD--FSVQENGDRF 85
VP + +E++ + + ++ P V Q+ + +
Sbjct: 10577 PAKVPEAPKEVVPEKKVSVAPKKKPEAPAVKVPEVPKAAVPQKKIPEAVPPKPESPPPEV 10636
Query: 86 SDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAE 145
+ K E + + E + V P K ++ E +
Sbjct: 10637 PEPPKEVVPEKKVSMVPPKRPEAPPAKVPEASKEVVPEKKVSVAPKKKPEAPAVKVPEVP 10696
Query: 146 KKSIDTVV 153
K ++
Sbjct: 10697 KAAVPQKK 10704
Score = 35.6 bits (80), Expect = 7.2, Method: Composition-based stats.
Identities = 7/74 (9%), Positives = 19/74 (25%)
Query: 48 DYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGE 107
+ K + K +E + + +V + + K ++ K
Sbjct: 10932 EKPKLKPRPPIRAPSPPKEDVKEKIFQLKAVSKKKVPEKPEVVEKVEPTPLKVPTAEKKV 10991
Query: 108 QALKESALLRMPVS 121
+ L +
Sbjct: 10992 RKLLPEPKPQPKEE 11005
>gi|323524839|ref|YP_004226992.1| protein TolA [Burkholderia sp. CCGE1001]
gi|323381841|gb|ADX53932.1| protein TolA [Burkholderia sp. CCGE1001]
Length = 342
Score = 42.2 bits (97), Expect = 0.069, Method: Composition-based stats.
Identities = 13/73 (17%), Positives = 21/73 (28%), Gaps = 8/73 (10%)
Query: 178 AIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRE 237
VR V N S + L + + + G +L G +
Sbjct: 259 YADKVRRVVRPN---ISWGGETEGLETVIAVRCSPTGTLLSATIAHSSGN-----PAWDD 310
Query: 238 NARKAVIKSQAFR 250
A +AV +S
Sbjct: 311 AALRAVQRSDPMP 323
>gi|261867196|ref|YP_003255118.1| protein TonB [Aggregatibacter actinomycetemcomitans D11S-1]
gi|261412528|gb|ACX81899.1| protein TonB [Aggregatibacter actinomycetemcomitans D11S-1]
Length = 234
Score = 42.2 bits (97), Expect = 0.069, Method: Composition-based stats.
Identities = 24/244 (9%), Positives = 60/244 (24%), Gaps = 41/244 (16%)
Query: 13 LHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENL 72
+H + + LL+ + V + ++E +
Sbjct: 17 IHAVIVYLLF----WSHVKKSDFSANSVVGELSTSISMEMLMAQVEA---------EPPP 63
Query: 73 VRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKAT 132
V + + + D + ++ ++ + + V
Sbjct: 64 VEEKAPEPEKQETVDDPTVKPEPPKVEKPKEKPKQKPRTDVPVGDKTV------------ 111
Query: 133 NKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNI 192
+ + S ++ +R + +
Sbjct: 112 ----------DSNASVNSKATSTGPVTTNNPNLAGSGASSDERNAYLSAIRREIEKHKRY 161
Query: 193 PSDFK-RFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRL 251
P+ K K+ V + F + G + G V G + L A AV +++
Sbjct: 162 PTRAKMMRKQGIVTVSFSIGADGSISGASIVKSSGAED-----LDNAALSAVNSARSIGP 216
Query: 252 SPST 255
P+
Sbjct: 217 RPAG 220
>gi|153005387|ref|YP_001379712.1| TonB family protein [Anaeromyxobacter sp. Fw109-5]
gi|152028960|gb|ABS26728.1| TonB family protein [Anaeromyxobacter sp. Fw109-5]
Length = 390
Score = 42.2 bits (97), Expect = 0.069, Method: Composition-based stats.
Identities = 9/82 (10%), Positives = 19/82 (23%), Gaps = 14/82 (17%)
Query: 181 IVRNRVIANWNIPSDFK---------RFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELV 231
V+ + W+ + + L+ G + V G
Sbjct: 278 RVKGAIAREWDPNRAMDARDPAAQRYGRRTRGTLVDIVLDPGGGLRDVRVVRGSG----- 332
Query: 232 RRMLRENARKAVIKSQAFRLSP 253
+A+ + F P
Sbjct: 333 LDFYDREVVRAIRAAAPFPNPP 354
>gi|145640337|ref|ZP_01795921.1| cell envelope integrity inner membrane protein TolA [Haemophilus
influenzae R3021]
gi|145274923|gb|EDK14785.1| cell envelope integrity inner membrane protein TolA [Haemophilus
influenzae 22.4-21]
Length = 313
Score = 42.2 bits (97), Expect = 0.070, Method: Composition-based stats.
Identities = 13/123 (10%), Positives = 37/123 (30%), Gaps = 12/123 (9%)
Query: 147 KSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKM 206
+ + S +++ + + F ++
Sbjct: 199 SASKGGNTNKGGTQGSGAALGSGDGGKVGDQYAGVIKKEIQRRFLKDPSFAGK---VCRI 255
Query: 207 HFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSP--STYKSWRNITL 264
QL + G +LG + G + + A A+ +++ +P Y+ +++ +
Sbjct: 256 KIQLGRDGTILGYQKI--SGPDD-----ICSAALSAMARTKKVPAAPSDEIYEKYKSPII 308
Query: 265 FFV 267
F
Sbjct: 309 DFD 311
>gi|66043473|ref|YP_233314.1| TonB, C-terminal [Pseudomonas syringae pv. syringae B728a]
gi|63254180|gb|AAY35276.1| TonB, C-terminal [Pseudomonas syringae pv. syringae B728a]
gi|330972217|gb|EGH72283.1| TonB [Pseudomonas syringae pv. aceris str. M302273PT]
Length = 248
Score = 42.2 bits (97), Expect = 0.071, Method: Composition-based stats.
Identities = 21/200 (10%), Positives = 44/200 (22%), Gaps = 6/200 (3%)
Query: 56 KIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESAL 115
+PV + L Q E +
Sbjct: 33 PAPQPVELPPAAMMVELAPVPEPAPPPPPKVVQPPPPPAPEEPTPVPEVVQAPKPEIVVP 92
Query: 116 LRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPS 175
++ Q E + + + +P K S
Sbjct: 93 KKVEKPKPKPQPPKPQKKPEPPKEKPADEKPVDTPPTTAQPAKPVAPKPAPAPSPPSNAL 152
Query: 176 QDAIAIVRNRVIANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRM 234
+ + + P D +R + ++ F ++ G VL + G
Sbjct: 153 PNWQGDLLGHLSKYKKYPEDARRRGMQGVARLRFVVDADGNVLSYSIANSSGS-----PA 207
Query: 235 LRENARKAVIKSQAFRLSPS 254
L + + ++Q P
Sbjct: 208 LDRATMEMIRRAQPLPKPPK 227
>gi|237755737|ref|ZP_04584343.1| putative TonB protein [Sulfurihydrogenibium yellowstonense SS-5]
gi|237692101|gb|EEP61103.1| putative TonB protein [Sulfurihydrogenibium yellowstonense SS-5]
Length = 258
Score = 42.2 bits (97), Expect = 0.074, Method: Composition-based stats.
Identities = 27/224 (12%), Positives = 71/224 (31%), Gaps = 15/224 (6%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
G+ +S+I H++ + L L V + + ++ I ++
Sbjct: 15 GIQVSLITHIILYIFLKIVPFPTLSVDTQKPIEIKIEEI--------------RKEIEKV 60
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
+ + + + ++ K +++ + K E K + ++ P +
Sbjct: 61 EVKKIPVQTKKEEVKVKNPIVNEEKKDLPVRKSQANQIEKKETTSKTTPAEKIQDKPQES 120
Query: 126 QKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNR 185
+ E + + K+ + V+ +E + S + A+ R+
Sbjct: 121 PIKKETLKIEDENLKLLSQIGKNPEGSGVQKSNQEESLSFGQKLSDIDKSAEGTALSRSL 180
Query: 186 VIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTE 229
+ P + VK ++ G V +++ G E
Sbjct: 181 LYKP-PPPKLTSSISQPSVKAKIWISPSGNVEKVELINITGDAE 223
>gi|218260411|ref|ZP_03475740.1| hypothetical protein PRABACTJOHN_01403 [Parabacteroides johnsonii
DSM 18315]
gi|218224539|gb|EEC97189.1| hypothetical protein PRABACTJOHN_01403 [Parabacteroides johnsonii
DSM 18315]
Length = 610
Score = 42.2 bits (97), Expect = 0.074, Method: Composition-based stats.
Identities = 15/171 (8%), Positives = 46/171 (26%), Gaps = 8/171 (4%)
Query: 4 ENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQ 63
G+ IS+++ + + F VQ ++ + S ++ + +
Sbjct: 357 RKGVLISVVITIFACVGSAVAFLVQGNKVSTKP--------SVTELISPVGEEKDSVSIP 408
Query: 64 FKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPY 123
+ E + + + E + + + + K+ + ++
Sbjct: 409 QDTTVSEMKIEESMLGEEDKKTETAIPRLPEKVTPVVVDEPRKQPETKQVPAEKNKITIQ 468
Query: 124 DKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIP 174
Q ++ + E S EK + + +
Sbjct: 469 PVQPTAEEIDAEYAALIASGKEKMRKADFTNAKKDFTKAKETKLTEEVVRL 519
>gi|145357099|ref|XP_001422760.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144583003|gb|ABP01077.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 1462
Score = 42.2 bits (97), Expect = 0.075, Method: Composition-based stats.
Identities = 13/170 (7%), Positives = 45/170 (26%), Gaps = 2/170 (1%)
Query: 16 MFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRD 75
+ L QL P ++ +D + + +
Sbjct: 1063 LIALSEIGALPFQLTKPPVLSPAITDAIKAADDGINVGLDEFPLQIHMPA--EAPAAPEM 1120
Query: 76 FSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKE 135
+ +E ++Q E+E + + E ++ + P ++++ +E
Sbjct: 1121 EANEEESIEVTEQQIVPVEEDEDQIEPVEEDEDQIEPVEEDEDQIEPVEEEEQITVGEEE 1180
Query: 136 QDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNR 185
+ E+ ++ + ++ + + +
Sbjct: 1181 EQTTVGEEEEQITVGEEEQTTVIDDREESIQGTLVPDADPDVDTDEIEVQ 1230
>gi|260597138|ref|YP_003209709.1| cell envelope integrity inner membrane protein TolA [Cronobacter
turicensis z3032]
gi|260216315|emb|CBA29299.1| Protein tolA [Cronobacter turicensis z3032]
Length = 424
Score = 42.2 bits (97), Expect = 0.075, Method: Composition-based stats.
Identities = 20/126 (15%), Positives = 39/126 (30%), Gaps = 11/126 (8%)
Query: 147 KSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANW-NIPSDFKRFKKLRVK 205
K+ +S+ S I +++ + + D +
Sbjct: 307 KNAPKTGGGAKGSNAAPAGSGNSKNNGASGAEINGYASQIKSAIESKFYDASSYSGKTCT 366
Query: 206 MHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPST--YKSWRNIT 263
+ +L G +L + GG + + AR+A PS Y+ ++N
Sbjct: 367 LRIKLAPDGLLLD---IQSEGGDPALCQAAISAARQA-----KIPKPPSQAVYEVFKNAP 418
Query: 264 LFFVPS 269
L F P
Sbjct: 419 LLFKPQ 424
>gi|126173974|ref|YP_001050123.1| TolA family protein [Shewanella baltica OS155]
gi|125997179|gb|ABN61254.1| TolA family protein [Shewanella baltica OS155]
Length = 342
Score = 42.2 bits (97), Expect = 0.075, Method: Composition-based stats.
Identities = 28/226 (12%), Positives = 70/226 (30%), Gaps = 15/226 (6%)
Query: 49 YHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATEN---ETKRSSSSK 105
+ +K + K QE V + + Q+ ++ + A + K + +
Sbjct: 126 KQQQEKEKAVKAEADRKLKEQERKVAEDAAQKAAEKRKVEEAAAAKAESDRKLKEAEAKA 185
Query: 106 GEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKV 165
+ K A + K + + + A + + ++
Sbjct: 186 KAEKAKADADAKAEAKAKAKADAKAKADAKAKADAEAKARAQQEQEMADALAAEQAALSQ 245
Query: 166 EKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVV 225
+ + + A++++ + N + + + +L GFV+
Sbjct: 246 TMNKQMQSEVGKYQAMIKSTIQRNLVVDESMRGK---TCTVSVRLANDGFVISSQ----T 298
Query: 226 GGTELVRRMLRENARKAVIKSQAFRLSPST--YKSWRNITLFFVPS 269
G + A+ A++K+ +SP Y + I L P+
Sbjct: 299 KGGDPNV---CRAAKAAILKAGKLPVSPDPAVYNLMKEINLIVEPT 341
>gi|84999488|ref|XP_954465.1| dihydrolipoamide succinyltransferase component of 2-oxoglutarate
dehydrogenase complex, mitochondrial precursor
[Theileria annulata]
gi|65305463|emb|CAI73788.1| dihydrolipoamide succinyltransferase component of 2-oxoglutarate
dehydrogenase complex, mitochondrial precursor, putative
[Theileria annulata]
Length = 457
Score = 42.2 bits (97), Expect = 0.076, Method: Composition-based stats.
Identities = 17/141 (12%), Positives = 42/141 (29%)
Query: 9 ISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSS 68
+S+ ++ F +L F+ + + ++ +D + + K +P
Sbjct: 114 VSVDVNSPFSGVLTKTFSNTGDTILVGKPLVEIDLAGKPSEKAPEKKPDAKPPASTPTKP 173
Query: 69 QENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKI 128
+ ++ S + KT T E+K + L +P S + +
Sbjct: 174 ETKSPEPPKPADSKPVSSFEVKTPPTPVESKPLPQFEKGSPLSMVPPTPVPSSDLEPETR 233
Query: 129 SKATNKEQDLQGISFAEKKSI 149
T + +
Sbjct: 234 VPLTRMRMRIAERLKLAQTEN 254
>gi|229528186|ref|ZP_04417577.1| ferric siderophore transport system binding protein TonB [Vibrio
cholerae 12129(1)]
gi|229334548|gb|EEO00034.1| ferric siderophore transport system binding protein TonB [Vibrio
cholerae 12129(1)]
gi|327485890|gb|AEA80296.1| Ferric siderophore transport system, periplasmic binding protein
TonB [Vibrio cholerae LMA3894-4]
Length = 244
Score = 42.2 bits (97), Expect = 0.078, Method: Composition-based stats.
Identities = 15/182 (8%), Positives = 43/182 (23%), Gaps = 2/182 (1%)
Query: 9 ISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNED-YHSSKYKKIEEPVVQFKGS 67
+S+ H + L + V + + + +S++ + + + E
Sbjct: 12 LSLAFHALLL-ITTDEAQVFAMPAGNPTQSVSINMVSMPKVAPAQPEQTQTEQSKPESVK 70
Query: 68 SQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQK 127
+ + K + + A + + K
Sbjct: 71 PTPVQEVVKTPPAKPKVEPHKPKPQTVKKPVPAEQAPSKSVAKPQPEKVERTAETPQKPA 130
Query: 128 ISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVI 187
+ Q + I ++ + + +RKR + +
Sbjct: 131 PTPNQQPSQPTAASQGITSQPILVDKPALVSAQVQPRYPRIARKRGIEGTVMYEIWLDAQ 190
Query: 188 AN 189
N
Sbjct: 191 GN 192
>gi|190149345|ref|YP_001967870.1| protein TonB2 [Actinobacillus pleuropneumoniae serovar 7 str. AP76]
gi|303250210|ref|ZP_07336411.1| protein TonB2 [Actinobacillus pleuropneumoniae serovar 6 str. Femo]
gi|303251899|ref|ZP_07338070.1| protein TonB2 [Actinobacillus pleuropneumoniae serovar 2 str. 4226]
gi|307244878|ref|ZP_07526976.1| hypothetical protein appser1_910 [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|307251598|ref|ZP_07533504.1| hypothetical protein appser6_1210 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|307253832|ref|ZP_07535685.1| hypothetical protein appser9_910 [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|307256097|ref|ZP_07537884.1| hypothetical protein appser10_1020 [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
gi|307258288|ref|ZP_07540030.1| hypothetical protein appser11_920 [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
gi|307260530|ref|ZP_07542223.1| hypothetical protein appser12_1040 [Actinobacillus pleuropneumoniae
serovar 12 str. 1096]
gi|307262659|ref|ZP_07544288.1| hypothetical protein appser13_870 [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
gi|40849962|gb|AAR95695.1| TonB2 [Actinobacillus pleuropneumoniae]
gi|189914476|gb|ACE60728.1| protein TonB2 [Actinobacillus pleuropneumoniae serovar 7 str. AP76]
gi|302649329|gb|EFL79514.1| protein TonB2 [Actinobacillus pleuropneumoniae serovar 2 str. 4226]
gi|302650921|gb|EFL81076.1| protein TonB2 [Actinobacillus pleuropneumoniae serovar 6 str. Femo]
gi|306854200|gb|EFM86407.1| hypothetical protein appser1_910 [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|306860909|gb|EFM92916.1| hypothetical protein appser6_1210 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|306863192|gb|EFM95133.1| hypothetical protein appser9_910 [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|306865278|gb|EFM97174.1| hypothetical protein appser10_1020 [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
gi|306867627|gb|EFM99473.1| hypothetical protein appser11_920 [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
gi|306869759|gb|EFN01543.1| hypothetical protein appser12_1040 [Actinobacillus pleuropneumoniae
serovar 12 str. 1096]
gi|306871987|gb|EFN03702.1| hypothetical protein appser13_870 [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
Length = 285
Score = 42.2 bits (97), Expect = 0.078, Method: Composition-based stats.
Identities = 30/283 (10%), Positives = 78/283 (27%), Gaps = 25/283 (8%)
Query: 4 ENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNI-YNEDYHSSKYKKIEEPVV 62
GL S+++H L + + E +S++ + + + E
Sbjct: 7 RIGLTGSILIHTAIFGGLASMVTHSHSDDLPQEETMSMELVAALLEQPQVAVAQEEPAPP 66
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
+ + E + + + K E ++ + + ++ + V
Sbjct: 67 EPEKVEVEPEPEPEAEAIPELKPQPKPKEKPKEKPKEKPKPKEPPKPKEKEKPKKEKVKD 126
Query: 123 YDKQKISKATNKEQDLQGISFA---------------EKKSIDTVVVRPDKKELLSKVEK 167
+ + K +Q + + + + + +
Sbjct: 127 KPIKALEKGPEAKQGIVAKAIPNAVQGTQLRAGIPNGKPEGNPNGLSANGSQNGAVGGSG 186
Query: 168 SSRKRIPSQDAIAIVRNRVIANWNIPSDFKRF---KKLRVKMHFQLNQKGFVLGKINVDV 224
S A ++ + N + K V + F ++ G ++ ++
Sbjct: 187 SGASGSEIGAYKAALQRALQRRANNAYPTREKMMRKTGVVTIGFTVSSSGELINVKVLNS 246
Query: 225 VGGTELVRRMLRENARKAVIKSQAFRLSPSTYKSWRNITLFFV 267
G L A KA +S P+ + S + + F
Sbjct: 247 SGNGN-----LDNAAVKA-AQSTKVSPPPAGFPSNVTVPVKFS 283
>gi|320353613|ref|YP_004194952.1| TonB family protein [Desulfobulbus propionicus DSM 2032]
gi|320122115|gb|ADW17661.1| TonB family protein [Desulfobulbus propionicus DSM 2032]
Length = 246
Score = 42.2 bits (97), Expect = 0.079, Method: Composition-based stats.
Identities = 29/235 (12%), Positives = 68/235 (28%), Gaps = 27/235 (11%)
Query: 9 ISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSS 68
+S+++H +F + Q VP+ + + + +KI P + K +
Sbjct: 10 VSLLVHAVFFFVAVGL--GQHAVPLRPPVAIDFSILSTGGSMEVQQEKISSPPAKKKDVA 67
Query: 69 QENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKI 128
+ + +V Q + + K + S A + V P Q
Sbjct: 68 EPKKISPKAVARKVRPKPVQREKTSVPPREKDARSEALPVAAQPRPSTGKEVLPDAGQTA 127
Query: 129 SKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIA 188
+ AT A+ V L + ++ R +
Sbjct: 128 ATATVASGPAAASPPAKGGRGGLYAVGQLDAPLAVVSKTPPAYPPAAK------RRNIEG 181
Query: 189 NWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAV 243
+K+ F ++++G V +D + ++ +++
Sbjct: 182 --------------WIKVKFVVDEQGRVDHVSVLDAEPEG-----VFEQSVLRSI 217
>gi|297580033|ref|ZP_06941960.1| tonB1 protein [Vibrio cholerae RC385]
gi|297535679|gb|EFH74513.1| tonB1 protein [Vibrio cholerae RC385]
Length = 249
Score = 42.2 bits (97), Expect = 0.079, Method: Composition-based stats.
Identities = 16/182 (8%), Positives = 43/182 (23%), Gaps = 2/182 (1%)
Query: 9 ISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNED-YHSSKYKKIEEPVVQFKGS 67
+S+ H + L + V + + + +S++ + + + EP
Sbjct: 17 LSLAFHALLL-ITTDEAQVFAMPAGNPTQSVSINMVSMPKVAPAQPEQTQTEPSKPESVK 75
Query: 68 SQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQK 127
+ + K + A + + K
Sbjct: 76 PTPVQEVVKTPPAKPKVEPHKPKPQTVKKPVPAEQVPSKSVAKPQPEKVERTAETAQKPA 135
Query: 128 ISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVI 187
+ Q + I ++ + + +RKR + +
Sbjct: 136 PTPNQQPSQPTAASQGITSQPILVDKPALVSAQVQPRYPRIARKRGIEGTVMYEIWLDAQ 195
Query: 188 AN 189
N
Sbjct: 196 GN 197
>gi|209522521|ref|ZP_03271109.1| TonB family protein [Burkholderia sp. H160]
gi|209497046|gb|EDZ97313.1| TonB family protein [Burkholderia sp. H160]
Length = 181
Score = 42.2 bits (97), Expect = 0.079, Method: Composition-based stats.
Identities = 14/95 (14%), Positives = 27/95 (28%), Gaps = 8/95 (8%)
Query: 164 KVEKSSRKRIPSQDAIAIVRNRV-IANWNIPSDFKRFKKLR--VKMHFQLNQKGFVLGKI 220
++ + V R+ N + K LR V + F +++ G ++
Sbjct: 56 STPVAAINSLTLDQYRDAVARRIVERNPSYVLQGKPQAMLRSLVVVSFTVDRDGHIVSSK 115
Query: 221 NVDVVGGTELVRRMLRENARKAVIKSQAFRLSPST 255
G E A + +S P
Sbjct: 116 VYRTNGDDE-----AESTALATLRRSAPLPEPPGK 145
>gi|148556649|ref|YP_001264231.1| TonB family protein [Sphingomonas wittichii RW1]
gi|148501839|gb|ABQ70093.1| TonB family protein [Sphingomonas wittichii RW1]
Length = 88
Score = 42.2 bits (97), Expect = 0.079, Method: Composition-based stats.
Identities = 11/82 (13%), Positives = 22/82 (26%), Gaps = 9/82 (10%)
Query: 174 PSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRR 233
+ R+ A + + F + + G ++ G
Sbjct: 1 MLASYQGQLWARISARKPRGLNLSG----VAMVRFAVGRAGELISVELAASSGNA----- 51
Query: 234 MLRENARKAVIKSQAFRLSPST 255
L A + V + F P+T
Sbjct: 52 ALDRLALRTVRNAGPFPPPPAT 73
>gi|253584052|ref|ZP_04861250.1| ligand gated channel protein TonB [Fusobacterium varium ATCC 27725]
gi|251834624|gb|EES63187.1| ligand gated channel protein TonB [Fusobacterium varium ATCC 27725]
Length = 241
Score = 42.2 bits (97), Expect = 0.079, Method: Composition-based stats.
Identities = 15/130 (11%), Positives = 31/130 (23%), Gaps = 2/130 (1%)
Query: 3 LENGLAISMILHVMFLLLLYF--NFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP 60
++ I+++LH M L L ++ + V +
Sbjct: 1 MKRYFIIALLLHGMLFLRLGLPTVTKDLDSKDNFLKQSVPVTFTQISRAVPAAAPAPLPV 60
Query: 61 VVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPV 120
V K + K + E + + ++ K +
Sbjct: 61 VEVPKPQEKPKKEIVKPETPKPVSKKTIPKKTEPKKEINKEPEVETKETSKVPETITTAA 120
Query: 121 SPYDKQKISK 130
S D I
Sbjct: 121 SSNDSTSIPS 130
>gi|221065981|ref|ZP_03542086.1| protein TolA [Comamonas testosteroni KF-1]
gi|220711004|gb|EED66372.1| protein TolA [Comamonas testosteroni KF-1]
Length = 381
Score = 42.2 bits (97), Expect = 0.079, Method: Composition-based stats.
Identities = 19/118 (16%), Positives = 31/118 (26%), Gaps = 8/118 (6%)
Query: 153 VVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQ 212
+ + SS PS A V RV N P R ++ +
Sbjct: 272 SDQAGSGGSRTGGAGSSASGGPSAGYAAKVAARVKPNIVYPDAVSG--NPRAEVRVRTAP 329
Query: 213 KGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPSTYKSWRNITLFFVPSK 270
G + G E +A+ K+ K ++ + F P
Sbjct: 330 DGTITSATISKSSGNA-----AWDEAVVRALHKTDKLPRDIDG-KVPSDLVIGFRPQD 381
>gi|50123220|ref|YP_052387.1| TonB protein [Pectobacterium atrosepticum SCRI1043]
gi|49613746|emb|CAG77197.1| TonB protein [Pectobacterium atrosepticum SCRI1043]
Length = 287
Score = 42.2 bits (97), Expect = 0.081, Method: Composition-based stats.
Identities = 28/222 (12%), Positives = 60/222 (27%), Gaps = 29/222 (13%)
Query: 24 NFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGD 83
+ + + +R + +SV+ + + + + E + +
Sbjct: 68 STSTPPVTVPARPQPVSVELVS-------MVAEPVQQAQPAEPLEPEVVTPPPELAPPPV 120
Query: 84 RFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISF 143
K+ K E K++ + + +P + K T +
Sbjct: 121 DKPVDDNALLPPEPEKKVPEKKPEPVPKKTPVKKSTTAPKPTPQPQKETASASAPITPAP 180
Query: 144 AEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLR 203
+K++ V P L + + AI R +
Sbjct: 181 VAQKAVALPVDAPLTPPLANADYLHNPAPSYPDVAI-----------------SRGYEGT 223
Query: 204 VKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIK 245
V ++ Q+ G V G L E AR V++
Sbjct: 224 VLLNVQVRADGKVQTIRIHQSSG-----YPSLDEAARDTVLR 260
>gi|32471263|ref|NP_864256.1| squalene-hopene cyclase [Rhodopirellula baltica SH 1]
gi|32396965|emb|CAD71935.1| similar to squalene-hopene cyclase [Rhodopirellula baltica SH 1]
Length = 636
Score = 42.2 bits (97), Expect = 0.081, Method: Composition-based stats.
Identities = 22/255 (8%), Positives = 59/255 (23%), Gaps = 25/255 (9%)
Query: 7 LAISMILHVMFLLLL-YFNFNVQLLVPISR----------------REMLSVDNIYNEDY 49
L +S+ LH + ++ + + P+S EML + + +
Sbjct: 70 LILSVALHGVLIVYVPKLSVFWSGGGPVSDSAADAGAADIAVSMFDPEML--ETLQDSSE 127
Query: 50 HSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDR---FSDQTKTHATENETKRSSSSKG 106
+ + + + + + S D D S +
Sbjct: 128 APVEASPLAALKLPEPLIPEREVDVESSEPLATDDSNHEPDSDIAPPAVEIPLPSMPATL 187
Query: 107 EQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVE 166
A + + + D + A+ ++
Sbjct: 188 ASAAIPTQPAPTESVDTEAAATDALDSSIDDWLQTALADPVEEPAKETMEQSSPEMTSPS 247
Query: 167 KSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVG 226
S + + ++ + + + ++ G + + G
Sbjct: 248 SRSGESQTVRSTHDDAIAKIAS-VRPAASLPKEHSAGTIDEDFASRAGAAKARALIQNGG 306
Query: 227 GTELVRRMLRENARK 241
+ E A K
Sbjct: 307 NADT--EAAVEAALK 319
>gi|229522440|ref|ZP_04411856.1| ferric siderophore transport system binding protein TonB [Vibrio
cholerae TM 11079-80]
gi|229340425|gb|EEO05431.1| ferric siderophore transport system binding protein TonB [Vibrio
cholerae TM 11079-80]
Length = 244
Score = 42.2 bits (97), Expect = 0.083, Method: Composition-based stats.
Identities = 16/182 (8%), Positives = 43/182 (23%), Gaps = 2/182 (1%)
Query: 9 ISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNED-YHSSKYKKIEEPVVQFKGS 67
+S+ H + L + V + + + +S++ + + + EP
Sbjct: 12 LSLAFHALLL-ITTDEAQVFAMPAGNPTQSVSINMVSMPKVAPAQPEQTQTEPSKPESVK 70
Query: 68 SQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQK 127
+ + K + A + + K
Sbjct: 71 PTPVQEVVKTPPAKPKVEPHKPKPQTVKKPVPAEQVPSKLVAKPQPEKVERTAETAQKPA 130
Query: 128 ISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVI 187
+ Q + I ++ + + +RKR + +
Sbjct: 131 PTPNQQPSQPTAASQGITSQPILVDKPALVSAQVQPRYPRIARKRGIEGTVMYEIWLDAQ 190
Query: 188 AN 189
N
Sbjct: 191 GN 192
>gi|163852773|ref|YP_001640816.1| hypothetical protein Mext_3359 [Methylobacterium extorquens PA1]
gi|163664378|gb|ABY31745.1| conserved hypothetical protein [Methylobacterium extorquens PA1]
Length = 148
Score = 42.2 bits (97), Expect = 0.083, Method: Composition-based stats.
Identities = 19/91 (20%), Positives = 41/91 (45%), Gaps = 5/91 (5%)
Query: 166 EKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVV 225
++ P+ + A +R + + W +P+D + + + F LN+ G + G V
Sbjct: 26 ARAQTASSPAINNWAGLRAALTSCWTVPADTEGSQ---IAFRFGLNKTGGMRGPPLVTSR 82
Query: 226 --GGTELVRRMLRENARKAVIKSQAFRLSPS 254
G + R+ E A +A+ + R++P+
Sbjct: 83 QLKGDQEARKRFEEAAFEALSRCFPMRITPA 113
>gi|194468206|ref|ZP_03074192.1| acyltransferase 3 [Lactobacillus reuteri 100-23]
gi|194453059|gb|EDX41957.1| acyltransferase 3 [Lactobacillus reuteri 100-23]
Length = 621
Score = 42.2 bits (97), Expect = 0.083, Method: Composition-based stats.
Identities = 17/144 (11%), Positives = 49/144 (34%), Gaps = 8/144 (5%)
Query: 99 KRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDK 158
+ + + K + ++K+ K ++ S K + P +
Sbjct: 405 QPNRAPKKTAVQQRIEQNHQAAEEHNKK-----IAKGDNVAEASGNTSKLQKQYDLTPAQ 459
Query: 159 KELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLG 218
+ K++ ++ DA ++ +++ N + + R + QL G +
Sbjct: 460 IKAAQKLKVTAIGDSVMADAADSIQ-KLMPNAYVDAQVGRQGSAAPDVIKQLKADGHLNK 518
Query: 219 KINVDVVGGTELVRRMLRE--NAR 240
I +++ + + L + +A
Sbjct: 519 IIILNLGTNGPMTQDTLDDILSAI 542
>gi|315927779|gb|EFV07105.1| tonB family C-terminal domain protein [Campylobacter jejuni subsp.
jejuni DFVF1099]
Length = 185
Score = 42.2 bits (97), Expect = 0.083, Method: Composition-based stats.
Identities = 16/162 (9%), Positives = 49/162 (30%), Gaps = 6/162 (3%)
Query: 94 TENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVV 153
+ + + E+ S + K + ++++ S K +++
Sbjct: 3 KKRVILKIKQKQDERISFNSQDKNAVLKVQKKIEKQDENQAQKEIANASENSKFKNESLS 62
Query: 154 VRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDF-KRFKKLRVKMHFQLNQ 212
+ ++ S + + A++ + P + + ++ V++ +++
Sbjct: 63 APLQSNKDKTQTIVSGNAKEQVKSYQALLMAHLTKFKKYPQEAIMQKQEGVVRIRVSIDE 122
Query: 213 KGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPS 254
G VL K L + A ++ P
Sbjct: 123 SGNVLSKELKKSCP-----YAALNDEALSLFKRASPLPKPPK 159
>gi|328725467|ref|XP_001944283.2| PREDICTED: titin-like [Acyrthosiphon pisum]
Length = 3009
Score = 42.2 bits (97), Expect = 0.084, Method: Composition-based stats.
Identities = 18/147 (12%), Positives = 43/147 (29%)
Query: 22 YFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQEN 81
F F + P + + ++ + KK E + + + E+
Sbjct: 974 VFTFKKTIEKPEDVQPISETVDVKIKPKRKPSVKKEEAADEITIEQIETIVKEEEQPTED 1033
Query: 82 GDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGI 141
+ + + + ETK S + LK P ++Q+ K +
Sbjct: 1034 VEVELKPKRKTSLKKETKEKSPEQSSVLLKRPKKKEKIPQPLEEQEEVFTFKKTIEKPED 1093
Query: 142 SFAEKKSIDTVVVRPDKKELLSKVEKS 168
+++D + K + +
Sbjct: 1094 VQPISETVDVKIKPKRKPSVKKEEAAD 1120
Score = 41.4 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 18/147 (12%), Positives = 42/147 (28%)
Query: 22 YFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQEN 81
F F + P + + ++ + KK E + + E+
Sbjct: 867 VFTFKKTIEKPEDVQPISETVDVKIKPKRKPSVKKEEAADEITIEQIETIVKEKDQPTED 926
Query: 82 GDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGI 141
+ + + + ETK S + LK P ++Q+ K +
Sbjct: 927 DEVELKPKRKTSLKKETKEKSPEQSSVLLKRPKKKEKIPQPLEEQEEVFTFKKTIEKPED 986
Query: 142 SFAEKKSIDTVVVRPDKKELLSKVEKS 168
+++D + K + +
Sbjct: 987 VQPISETVDVKIKPKRKPSVKKEEAAD 1013
Score = 39.5 bits (90), Expect = 0.51, Method: Composition-based stats.
Identities = 18/147 (12%), Positives = 42/147 (28%)
Query: 22 YFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQEN 81
F F + P + + ++ + KK E + + E+
Sbjct: 546 VFTFKKTIEKPEDVQPISETIDVKIKPKRKPSVKKEEAADEITIEQIETIVKEKDQPTED 605
Query: 82 GDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGI 141
+ + + + ETK S + LK P + Q+ K +
Sbjct: 606 VEVELKPKRKTSLKKETKEKSPEQSSVLLKRPKKKDEIPQPLEVQEEVFTFKKTIEKPED 665
Query: 142 SFAEKKSIDTVVVRPDKKELLSKVEKS 168
+++D + K + ++
Sbjct: 666 VQPISETVDVKIEPKRKPSIKNEEAAD 692
Score = 38.7 bits (88), Expect = 0.77, Method: Composition-based stats.
Identities = 17/152 (11%), Positives = 37/152 (24%), Gaps = 6/152 (3%)
Query: 22 YFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQEN 81
F F + P + I K K+ + + V+E
Sbjct: 760 VFTFKKTIEKPEDVQP------ISETVDVKIKPKRKPSVKKEEAADEITIEQIETIVKEE 813
Query: 82 GDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGI 141
D + +T +K + + S LL+ P + + + + +
Sbjct: 814 EQPTEDVEVELKPKRKTSLKKETKEKSPEQSSVLLKRPNKKEEIPQTLEEQEEVFTFKKT 873
Query: 142 SFAEKKSIDTVVVRPDKKELLSKVEKSSRKRI 173
+ K + K +
Sbjct: 874 IEKPEDVQPISETVDVKIKPKRKPSVKKEEAA 905
Score = 38.7 bits (88), Expect = 0.81, Method: Composition-based stats.
Identities = 18/147 (12%), Positives = 41/147 (27%)
Query: 22 YFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQEN 81
F F + P + + ++ E K E + + E+
Sbjct: 332 VFTFKKTIEKPEDVQPISETVDVEIEPKRKPSVKNEEAADEITIEQIETIVKEKDRPTED 391
Query: 82 GDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGI 141
+ + + + ETK S + LK P ++Q+ K +
Sbjct: 392 VEVELKPKRKTSLKKETKEKSPEQSSVLLKRPKKKEEIPQPLEEQEEVFMFKKTIEKPED 451
Query: 142 SFAEKKSIDTVVVRPDKKELLSKVEKS 168
+++D + K + +
Sbjct: 452 VQPISETVDVKIKPKRKPSVKKEEAAD 478
Score = 38.7 bits (88), Expect = 0.82, Method: Composition-based stats.
Identities = 16/152 (10%), Positives = 37/152 (24%), Gaps = 6/152 (3%)
Query: 22 YFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQEN 81
F F + P + I + K+ + + V+E
Sbjct: 653 VFTFKKTIEKPEDVQP------ISETVDVKIEPKRKPSIKNEEAADEITIEQIETIVKEK 706
Query: 82 GDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGI 141
D + +T +K + + S LL+ P + + + + +
Sbjct: 707 DQPTEDVEVELKPKRKTSLKKETKEKSPEQSSVLLKRPKKKEEIPQTLEEQEEVFTFKKT 766
Query: 142 SFAEKKSIDTVVVRPDKKELLSKVEKSSRKRI 173
+ K + K +
Sbjct: 767 IEKPEDVQPISETVDVKIKPKRKPSVKKEEAA 798
Score = 38.0 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 17/139 (12%), Positives = 40/139 (28%)
Query: 22 YFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQEN 81
F F + P + + ++ + KK E + + + E+
Sbjct: 1081 VFTFKKTIEKPEDVQPISETVDVKIKPKRKPSVKKEEAADEITIEQIETIVKEEEQPTED 1140
Query: 82 GDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGI 141
+ + + + ETK S + LK + D+ + K + +
Sbjct: 1141 VEVELKPKRKTSLKKETKEKSPEQSSVLLKRPVKKVDKSNEIDQHEEVFTIKKTPEQSML 1200
Query: 142 SFAEKKSIDTVVVRPDKKE 160
E ++P +
Sbjct: 1201 LNEEFSETVEFKMKPKRNS 1219
>gi|170738784|ref|YP_001767439.1| hypothetical protein M446_0439 [Methylobacterium sp. 4-46]
gi|168193058|gb|ACA15005.1| conserved hypothetical protein [Methylobacterium sp. 4-46]
Length = 151
Score = 42.2 bits (97), Expect = 0.085, Method: Composition-based stats.
Identities = 19/77 (24%), Positives = 32/77 (41%), Gaps = 5/77 (6%)
Query: 180 AIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVG--GTELVRRMLRE 237
A +R + A W IPS + + F L++ G + G+ V G +
Sbjct: 32 AEMRAALAACWTIPSGTEGS---LIAFRFGLDKTGAMRGQPLVTARRFKGDRGAAEHFED 88
Query: 238 NARKAVIKSQAFRLSPS 254
AR A+ + R++PS
Sbjct: 89 AARAALARCFPMRVTPS 105
>gi|322817374|gb|EFZ25179.1| mucin-associated surface protein (MASP), putative [Trypanosoma
cruzi]
Length = 429
Score = 42.2 bits (97), Expect = 0.085, Method: Composition-based stats.
Identities = 16/139 (11%), Positives = 46/139 (33%), Gaps = 6/139 (4%)
Query: 36 REMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATE 95
++SVD + K ++ V K ++E V++ + G+ + +
Sbjct: 253 PPVVSVDV------ENPKSVELIRDDVGGKRQTREKTVQEPPTVKLGENVPAELISTEDA 306
Query: 96 NETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVR 155
E ++ + + + + + +++ + K ++ Q +
Sbjct: 307 AEGEKQKTEEKAEKAETKEEQKTTAEKSNEETQTAPEKKTKEEQKDKEVQHVRSKNEEKE 366
Query: 156 PDKKELLSKVEKSSRKRIP 174
D+ + +K E K
Sbjct: 367 TDEAQPAAKKEADVEKTAA 385
>gi|253687642|ref|YP_003016832.1| protein TolA [Pectobacterium carotovorum subsp. carotovorum PC1]
gi|251754220|gb|ACT12296.1| protein TolA [Pectobacterium carotovorum subsp. carotovorum PC1]
Length = 395
Score = 42.2 bits (97), Expect = 0.085, Method: Composition-based stats.
Identities = 15/118 (12%), Positives = 40/118 (33%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPV 61
+L+ + IS +LHV+ + LL ++ + Q + S+D + + + ++
Sbjct: 10 KLKRAVIISAVLHVILIALLLWSSSTQTMDASGGGGGSSIDAVMVDPSAVVEQYNRQQQQ 69
Query: 62 VQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMP 119
S++ + Q + + + K ++ E +
Sbjct: 70 QTDAKRSEQQRQKQAERQAEELQQKQAAEQQRLKELEKERLQAQEEAKKQAQEQADQR 127
>gi|307295482|ref|ZP_07575318.1| TonB family protein [Sphingobium chlorophenolicum L-1]
gi|306878521|gb|EFN09741.1| TonB family protein [Sphingobium chlorophenolicum L-1]
Length = 255
Score = 42.2 bits (97), Expect = 0.086, Method: Composition-based stats.
Identities = 19/148 (12%), Positives = 50/148 (33%), Gaps = 6/148 (4%)
Query: 108 QALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEK 167
+ R+ + + + + + + + +
Sbjct: 94 APPVVAVPSRLSLPMSAQPAAASVADPAPAASQATRPAMATAASSAAASPARRGAVDRLD 153
Query: 168 SSRKRIPSQDAIAIVRNRVIANWNIPSDFK-RFKKLRVKMHFQLNQKGFVLGKINVDVVG 226
S+ A VR+ + A+ P + R ++ +V++ F L++ G +L + G
Sbjct: 154 LKAPAGTSRSYAAKVRSWLYAHKIYPRRARMRREEGQVQVRFVLDRAGMLLEGAVIQGSG 213
Query: 227 GTELVRRMLRENARKAVIKSQAFRLSPS 254
T +L E A + ++ + +P+
Sbjct: 214 NT-----ILDEEAEAMLRRASPYPPAPA 236
>gi|302189230|ref|ZP_07265903.1| tonB protein [Pseudomonas syringae pv. syringae 642]
Length = 248
Score = 42.2 bits (97), Expect = 0.086, Method: Composition-based stats.
Identities = 19/200 (9%), Positives = 45/200 (22%), Gaps = 6/200 (3%)
Query: 56 KIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESAL 115
+ + + L Q E +
Sbjct: 33 PASQAIELPPAAMMVELAPLPEPAPPPPPKVVQPPPPPAPEEPTPVPEVVQAPKPEIVVP 92
Query: 116 LRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPS 175
++ Q E + + + +P+K S
Sbjct: 93 KKVEKPKPKPQPPKPQKKLEPPKEKPADEKPVDTPPTTAQPEKPAAPKPAPAPSPPSNAL 152
Query: 176 QDAIAIVRNRVIANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRM 234
+ + + P D +R + ++ F ++ G VL + G +
Sbjct: 153 PSWQGDLLSHLGKYKKYPEDARRRGMQGVARLRFVVDADGNVLSYSIANSSGSS-----A 207
Query: 235 LRENARKAVIKSQAFRLSPS 254
L + + ++Q P
Sbjct: 208 LDRATMEMIRRAQPLPKPPK 227
>gi|330964241|gb|EGH64501.1| tonB protein [Pseudomonas syringae pv. actinidiae str. M302091]
Length = 252
Score = 42.2 bits (97), Expect = 0.087, Method: Composition-based stats.
Identities = 21/250 (8%), Positives = 55/250 (22%), Gaps = 33/250 (13%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
L + + +H + + I + + + Q
Sbjct: 14 SLLLVLAVHAIAI---IVAVRWPASQAIELPPAAMMVELAPLPEPAPPPPPKVVQPPQPP 70
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
++ + + + + + K E ++ A + +P
Sbjct: 71 APEEQVPMPEVAQAPKPEIVVPKKVEKPKPKPQPPKPQKKPEPPQEKPADEKPVDTPPST 130
Query: 126 QKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNR 185
K K+ + +
Sbjct: 131 AKPEKSAAPAPAPTPSPSPS------------------------PPSTALPSWQGDLLSH 166
Query: 186 VIANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVI 244
+ P D +R + ++ F ++ G VL + G L + +
Sbjct: 167 LGKYKKYPEDARRRGMQGVARLRFVVDADGNVLSYSIANSSGS-----PALDRATMEMIR 221
Query: 245 KSQAFRLSPS 254
++Q P
Sbjct: 222 RAQPLPKPPK 231
>gi|260807192|ref|XP_002598393.1| hypothetical protein BRAFLDRAFT_128123 [Branchiostoma floridae]
gi|229283665|gb|EEN54405.1| hypothetical protein BRAFLDRAFT_128123 [Branchiostoma floridae]
Length = 1869
Score = 42.2 bits (97), Expect = 0.087, Method: Composition-based stats.
Identities = 19/199 (9%), Positives = 59/199 (29%), Gaps = 7/199 (3%)
Query: 74 RDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATN 133
+ ++++ R D+ + + + E KE+ + + +K K
Sbjct: 864 EEQAIKKEHQRAQDELVARHKDEREELEAKMDQEMRKKEAEERKKFEAEREKALREKKNK 923
Query: 134 KEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIV----RNRVIAN 189
+ +L ++ + ++ +++ + + + RNR+
Sbjct: 924 QAAELAARKDLTEEEMAALLAAHEQELEDLNDRLDAERSRQQLSLRDKLLARKRNRLQNK 983
Query: 190 WNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAV---IKS 246
+ L K + + V ++ G + + +AV +
Sbjct: 984 QRKQEAEMTKELLEQKKELKEARTKQVKEAEKQAMIEGIQQNGTEAGDRVIRAVLERRHA 1043
Query: 247 QAFRLSPSTYKSWRNITLF 265
Q + Y + + +
Sbjct: 1044 QELQDLEEEYGLEKKVMID 1062
>gi|192360206|ref|YP_001983143.1| putative energy transducer TonB, C-terminal region [Cellvibrio
japonicus Ueda107]
gi|190686371|gb|ACE84049.1| possible energy transducer TonB, C-terminal region [Cellvibrio
japonicus Ueda107]
Length = 268
Score = 42.2 bits (97), Expect = 0.088, Method: Composition-based stats.
Identities = 23/256 (8%), Positives = 64/256 (25%), Gaps = 54/256 (21%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
L +++H + + + ++ P + +L + +P
Sbjct: 23 SLISVVLIHALLIGMAFW-------HPAYLQPVLPDSPPRIMEAALITAAPPHQPTELPP 75
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
G Q V ++ + E + + K+ + +
Sbjct: 76 GPQQVEAVATPEPMVKPEQAPELLTHKEAETVIRSAPEVPKPPREKKVEEIVKEAPVVNP 135
Query: 126 QKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNR 185
+++ + + ++ + ++ +
Sbjct: 136 VDATQSAPETTAPAAVEAQPAETATAIATG--------------------------IQQQ 169
Query: 186 VIA---NWNIPSDFK-------------RFKKLRVKMHFQLNQKGFVLGKINVDVVGGTE 229
+ A NW R ++ + F +++ G VL + G E
Sbjct: 170 IRAATLNWQSLLQMHLEQRKRYPRRAQMRHQEGVPLVRFTMDRSGQVLSAELIKTSGHGE 229
Query: 230 LVRRMLRENARKAVIK 245
L + A V +
Sbjct: 230 -----LDKEAIALVKR 240
>gi|187479384|ref|YP_787409.1| TolA protein [Bordetella avium 197N]
gi|115423971|emb|CAJ50524.1| TolA protein [Bordetella avium 197N]
Length = 377
Score = 42.2 bits (97), Expect = 0.088, Method: Composition-based stats.
Identities = 12/89 (13%), Positives = 18/89 (20%), Gaps = 6/89 (6%)
Query: 165 VEKSSRKRIPSQDAIAIVRNRVIANWNIP-SDFKRFKKLRVKMHFQLNQKGFVLGKINVD 223
+++ A VR V P V+ QL G V
Sbjct: 277 ADRNQAGGGRDNGYGAKVRACVQPGVAYPTPPRAGSANPTVEYRVQLGSDGRVNNLTLTR 336
Query: 224 VVGGTELVRRMLRENARKAVIKSQAFRLS 252
G + + F
Sbjct: 337 SSGNAG-----FDRAVENGIRRCNPFPKP 360
>gi|325579034|ref|ZP_08148990.1| TolA colicin import membrane protein [Haemophilus parainfluenzae
ATCC 33392]
gi|325159269|gb|EGC71403.1| TolA colicin import membrane protein [Haemophilus parainfluenzae
ATCC 33392]
Length = 415
Score = 42.2 bits (97), Expect = 0.088, Method: Composition-based stats.
Identities = 15/123 (12%), Positives = 35/123 (28%), Gaps = 12/123 (9%)
Query: 147 KSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKM 206
+ + + +++ + + F +
Sbjct: 299 SASKGGNANKGGTQGSGAGLGAGDGGKVGDQYAGVIKREIQRRFLKDPSFAGK---VCSI 355
Query: 207 HFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPST--YKSWRNITL 264
QL + G +LG V + A AV +++ +PS Y+ ++ T+
Sbjct: 356 KIQLGRDGTILGYQRVSGSDD-------ICTAALSAVARTKKVPAAPSDAIYEKYKAPTI 408
Query: 265 FFV 267
F
Sbjct: 409 DFD 411
>gi|197334288|ref|YP_002155722.1| protein TolA [Vibrio fischeri MJ11]
gi|197315778|gb|ACH65225.1| protein TolA [Vibrio fischeri MJ11]
Length = 346
Score = 41.8 bits (96), Expect = 0.090, Method: Composition-based stats.
Identities = 17/176 (9%), Positives = 60/176 (34%), Gaps = 2/176 (1%)
Query: 4 ENGLAISMILHVMFLLLLYFN--FNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPV 61
+ +S++LH++ ++ L F F++ + + + +D + ++ E
Sbjct: 8 TFAIGVSIVLHLLLVIALIFGSDFSLDDKAKPNTIQAVVIDPGTIAKQANQIRQERERAE 67
Query: 62 VQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVS 121
+ ++ + +++N ++ + + ++ ++ + E+ K++
Sbjct: 68 RAEQDRLKKLKQQAERLEKNRKAEEERIRRLKEKQVQEKKAARQAEEERKKAVAEAKKEK 127
Query: 122 PYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQD 177
++ K A++ I + K+ + R D
Sbjct: 128 ERAVAAEAERKRKADAAAKAEAAKQAKIKADKEKAAKEAAKKAQLEKERAAKAEAD 183
>gi|156934766|ref|YP_001438682.1| cell envelope integrity inner membrane protein TolA [Cronobacter
sakazakii ATCC BAA-894]
gi|156533020|gb|ABU77846.1| hypothetical protein ESA_02606 [Cronobacter sakazakii ATCC BAA-894]
Length = 412
Score = 41.8 bits (96), Expect = 0.091, Method: Composition-based stats.
Identities = 20/126 (15%), Positives = 39/126 (30%), Gaps = 11/126 (8%)
Query: 147 KSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANW-NIPSDFKRFKKLRVK 205
K+ +S+ S I +++ + + D +
Sbjct: 295 KNAPKTGGGAKGSNAAPAGSGNSKNNGASGAEINGYASQIKSAIESKFYDASSYSGKTCT 354
Query: 206 MHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPST--YKSWRNIT 263
+ +L G +L + GG + + AR+A PS Y+ ++N
Sbjct: 355 LRIKLAPDGLLLD---IQSEGGDPALCQAAISAARQA-----KIPKPPSQAVYEVFKNAP 406
Query: 264 LFFVPS 269
L F P
Sbjct: 407 LLFKPQ 412
>gi|153212402|ref|ZP_01948184.1| tonB1 protein [Vibrio cholerae 1587]
gi|254224774|ref|ZP_04918390.1| tonB1 protein [Vibrio cholerae V51]
gi|254284540|ref|ZP_04959507.1| tonB1 protein [Vibrio cholerae AM-19226]
gi|124116610|gb|EAY35430.1| tonB1 protein [Vibrio cholerae 1587]
gi|125622837|gb|EAZ51155.1| tonB1 protein [Vibrio cholerae V51]
gi|150425325|gb|EDN17101.1| tonB1 protein [Vibrio cholerae AM-19226]
Length = 249
Score = 41.8 bits (96), Expect = 0.091, Method: Composition-based stats.
Identities = 15/182 (8%), Positives = 43/182 (23%), Gaps = 2/182 (1%)
Query: 9 ISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNED-YHSSKYKKIEEPVVQFKGS 67
+S+ H + L + V + + + +S++ + + + E
Sbjct: 17 LSLAFHALLL-ITTDEAQVFAMPAGNPTQSVSINMVSMPKVAPAQPEQTQTEQSKPESVK 75
Query: 68 SQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQK 127
+ + K + + A + + K
Sbjct: 76 PTPVQEVVKTPPAKPKVEPHKPKPQTVKKPVPAEQAPSKSVAKPQPEKVERTAETPQKPA 135
Query: 128 ISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVI 187
+ Q + I ++ + + +RKR + +
Sbjct: 136 PTPNQQPSQPTAASQGITSQPILVDKPALVSAQVQPRYPRIARKRGIEGTVMYEIWLDAQ 195
Query: 188 AN 189
N
Sbjct: 196 GN 197
>gi|52144762|ref|YP_082066.1| internalin protein [Bacillus cereus E33L]
gi|51978231|gb|AAU19781.1| possible internalin protein [Bacillus cereus E33L]
Length = 1112
Score = 41.8 bits (96), Expect = 0.091, Method: Composition-based stats.
Identities = 15/159 (9%), Positives = 33/159 (20%)
Query: 19 LLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSV 78
L L F+ V + V+ + K + + + E +
Sbjct: 824 LSLLFSGTVMQNIVAKEEPKEPVEEVEGSKEEPIKEAEGSKEEPKGPAKEVEGPKEEVKE 883
Query: 79 QENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDL 138
+ + K E + + + + +
Sbjct: 884 PAKEVEGPKEEVKEPAKEVEGLKEEVKEPAKEVEGPKEEVKEPAKEVEGPKEEVKEPAKE 943
Query: 139 QGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQD 177
E K V P ++ E K +
Sbjct: 944 VEGPKEEVKEPAKEVEGPKEEVREPTKEVEGPKEEVKEP 982
>gi|167618867|ref|ZP_02387498.1| TolA protein [Burkholderia thailandensis Bt4]
Length = 333
Score = 41.8 bits (96), Expect = 0.091, Method: Composition-based stats.
Identities = 25/204 (12%), Positives = 54/204 (26%), Gaps = 9/204 (4%)
Query: 67 SSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQ 126
++ + Q+ + + E + + + A ++ A +
Sbjct: 139 EREKQKQAEKLKQQQLAEQQRKLEQQKLEQQKLEQQKKQEQLAAQKKADAEKAAKAAAAK 198
Query: 127 KISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRV 186
+ A K + A+ + + + S S S VR RV
Sbjct: 199 ANAAAKAKLDKERQARLAQLQGMAGGGSGGGEGLAKSGTGTGSGGNAASPGYADKVRRRV 258
Query: 187 IANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKS 246
N L + + G VL G + + A+ S
Sbjct: 259 KPN---IVWAGERDSLVTVVAIRCTPSGDVLSTSIRRSSGNSGW-----DQAVISAIQAS 310
Query: 247 QAFRLSPSTYKSWRNITLFFVPSK 270
+ ++ IT+ F ++
Sbjct: 311 VPLP-PDTNGRTPSEITITFKAAE 333
>gi|116208704|ref|XP_001230161.1| hypothetical protein CHGG_03645 [Chaetomium globosum CBS 148.51]
gi|88184242|gb|EAQ91710.1| hypothetical protein CHGG_03645 [Chaetomium globosum CBS 148.51]
Length = 805
Score = 41.8 bits (96), Expect = 0.092, Method: Composition-based stats.
Identities = 11/123 (8%), Positives = 35/123 (28%), Gaps = 1/123 (0%)
Query: 28 QLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSD 87
+ ++ E + + D + K + + + + E + S + + +D
Sbjct: 682 KEKPAETKPEDKKAEE-KDTDKTKEEPKVEAKAEDKSEDKTTEEQPKVDSEPKKEESQAD 740
Query: 88 QTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKK 147
+ T T + + + A + K+ +K ++ +
Sbjct: 741 EESPDVTPIATPLETPTPENGSQLSEAPKEAETPQDVTAEEGKSDDKAEEQSKSERQTRD 800
Query: 148 SID 150
Sbjct: 801 KAR 803
>gi|167751917|ref|ZP_02424044.1| hypothetical protein ALIPUT_00159 [Alistipes putredinis DSM 17216]
gi|167660158|gb|EDS04288.1| hypothetical protein ALIPUT_00159 [Alistipes putredinis DSM 17216]
Length = 268
Score = 41.8 bits (96), Expect = 0.094, Method: Composition-based stats.
Identities = 17/156 (10%), Positives = 39/156 (25%), Gaps = 6/156 (3%)
Query: 92 HATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDT 151
E + K + + + + N+ G + + +
Sbjct: 93 EREEIAVQTPQPEKKPRERETPGQTPQRSDAQQPAEQPRTVNRRALFPGRTAGSTSTSEG 152
Query: 152 VVVRPDKKELLS---KVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHF 208
LS + + S A + V+ + + +V +
Sbjct: 153 PAAGEGNAGDLSGAPEGSHDGTGQSDSGIAYDLSGRSVVGKL-PKPSYPGNESGKVVVDV 211
Query: 209 QLNQKGFVL--GKINVDVVGGTELVRRMLRENARKA 242
++ G V ++ + E ARKA
Sbjct: 212 TVDASGRVTYASYRAQGSTTNSKRLVDAAVEAARKA 247
>gi|315223954|ref|ZP_07865798.1| TonB family domain protein [Capnocytophaga ochracea F0287]
gi|314946058|gb|EFS98063.1| TonB family domain protein [Capnocytophaga ochracea F0287]
Length = 275
Score = 41.8 bits (96), Expect = 0.094, Method: Composition-based stats.
Identities = 29/237 (12%), Positives = 64/237 (27%), Gaps = 7/237 (2%)
Query: 10 SMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSS---KYKKIEEPVVQFKG 66
S+ L + + L+ F + + V+ IY D + K
Sbjct: 12 SLALTTVVMCLVIFILFFAGMKYLDPPPEKGVEVIYGVDLVGMGEHTSPPSAAKQEETKT 71
Query: 67 SSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQ 126
Q + S + + + + E + K E K++ +P +
Sbjct: 72 PPQIQPEQSTSQEVKENLLAQDNNEEVSVPEVPKKKEKKKETPKKDTPKESPKPAPKPSR 131
Query: 127 KISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRV 186
+ S A + + + ++ +S +
Sbjct: 132 ETSDALSNILGAANAGGSGTSGQGDGNQLGYQGQIDGSQYPNSYYGSGGGNGTGKGWGLK 191
Query: 187 IANWNIPSDFKR--FKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARK 241
+ ++ RV + ++++ G V+ I L E ARK
Sbjct: 192 GRTIASQGKVPQNCNEEGRVVVQIEVDRSGKVVKAIAGVKGTTNSAQC--LLEAARK 246
>gi|90412128|ref|ZP_01220134.1| hypothetical tolA protein [Photobacterium profundum 3TCK]
gi|90326852|gb|EAS43237.1| hypothetical tolA protein [Photobacterium profundum 3TCK]
Length = 347
Score = 41.8 bits (96), Expect = 0.094, Method: Composition-based stats.
Identities = 27/243 (11%), Positives = 73/243 (30%), Gaps = 12/243 (4%)
Query: 29 LLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQ 88
++ ++ + D + K+ + QE + ++ +
Sbjct: 115 ERKRVNAEKLKVAEEKRKADEATKVAKQQAAKAEADRKQKQEATKKAELARQQKVEQQRK 174
Query: 89 TKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKS 148
+ + E R ++ + +A + + + +A K + + + ++ +
Sbjct: 175 AEEATRKAEADRKAAEEERKAQVAAKEKAEAAARKAEVARKEAVRKAAEAKELQRQQEAA 234
Query: 149 IDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHF 208
++ + + + + AI + N + F + +
Sbjct: 235 LNDMFSGLETESEQRGGARGQFVADEVSRYGAIYTQMIQQNLLVDQSFVGKE---CILTM 291
Query: 209 QLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLS--PSTYKSWRNITLFF 266
+L+ G +L L A+ AV+K F + P + R+I L
Sbjct: 292 RLSANGLLLNA-------SEAGGDNRLCRAAKAAVVKVSQFPMPDDPQVVEKLRSIRLTV 344
Query: 267 VPS 269
P
Sbjct: 345 SPQ 347
>gi|149174837|ref|ZP_01853461.1| hypothetical protein PM8797T_10694 [Planctomyces maris DSM 8797]
gi|148846174|gb|EDL60513.1| hypothetical protein PM8797T_10694 [Planctomyces maris DSM 8797]
Length = 749
Score = 41.8 bits (96), Expect = 0.095, Method: Composition-based stats.
Identities = 18/180 (10%), Positives = 54/180 (30%), Gaps = 14/180 (7%)
Query: 4 ENGLAISMILHVMFLLLLYFNFNVQLLVPISRREML------------SVDNIYNEDYHS 51
L S+I+H+ L + + Q +++ E + S + I N++ +
Sbjct: 54 SKALLFSIIVHLSLSLGVVTFWPEQAPTSLAKSEPVQEKDDITLNLTESTETIKNKESGN 113
Query: 52 SKYKKIEEPVVQFKGSSQENLVRDFSV--QENGDRFSDQTKTHATENETKRSSSSKGEQA 109
S + P + + S + +F+ + + +S
Sbjct: 114 SPVWEKLPPPKKTELSRIDLSRPEFTPLSAPPEKERPQEISDMPMPDVVSKSDLPVTPSK 173
Query: 110 LKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSS 169
+ + + + +I+ T + + + + ++L + +
Sbjct: 174 VNIENVSQKRIQSQAPLEITDITAESRSEVSVPSTSHSRSKMIRSGQFDQQLERQSTPGA 233
>gi|329904216|ref|ZP_08273699.1| putative tolA (transport transmembrane-like protein)
[Oxalobacteraceae bacterium IMCC9480]
gi|327548112|gb|EGF32833.1| putative tolA (transport transmembrane-like protein)
[Oxalobacteraceae bacterium IMCC9480]
Length = 74
Score = 41.8 bits (96), Expect = 0.097, Method: Composition-based stats.
Identities = 13/51 (25%), Positives = 18/51 (35%), Gaps = 5/51 (9%)
Query: 200 KKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFR 250
V+ +L G V G + G E R+A+ KSQ F
Sbjct: 10 GNPSVEYAVELLPDGTVRGIRKLKTSG-----IPGFDEAVRRAIEKSQPFP 55
>gi|229526533|ref|ZP_04415937.1| ferric siderophore transport system binding protein TonB [Vibrio
cholerae bv. albensis VL426]
gi|229336691|gb|EEO01709.1| ferric siderophore transport system binding protein TonB [Vibrio
cholerae bv. albensis VL426]
Length = 244
Score = 41.8 bits (96), Expect = 0.098, Method: Composition-based stats.
Identities = 15/182 (8%), Positives = 42/182 (23%), Gaps = 2/182 (1%)
Query: 9 ISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNED-YHSSKYKKIEEPVVQFKGS 67
+S+ H + L + V + + + +S++ + + + E
Sbjct: 12 LSLAFHALLL-ITTDEAQVFAMPAGNPTQSVSINMVSMPKVAPAQPEQTQTEQSKPESVK 70
Query: 68 SQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQK 127
+ + K + A + + K
Sbjct: 71 PTPVQEVVKTPPAKPKVEPHKPKPQTVKKPVPAEQVPSKSVAKPQPEKVERTAETAQKPA 130
Query: 128 ISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVI 187
+ Q + I ++ + + +RKR + +
Sbjct: 131 PTPNQQPSQPTAASQGITSQPILVDKPALVSAQVQPRYPRIARKRGIEGTVMYEIWLDAQ 190
Query: 188 AN 189
N
Sbjct: 191 GN 192
>gi|330876518|gb|EGH10667.1| tonB protein [Pseudomonas syringae pv. morsprunorum str. M302280PT]
Length = 248
Score = 41.8 bits (96), Expect = 0.10, Method: Composition-based stats.
Identities = 21/250 (8%), Positives = 56/250 (22%), Gaps = 37/250 (14%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
L + + +H + + I + + + Q
Sbjct: 14 SLLLVLAVHAIAI---IVAVRWPASQAIELPPAAMMVELAPLPEPAPPPPPKVVQPPQPP 70
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
++ + + + + + K E ++ A + +P
Sbjct: 71 APEEQVPMPELAQAPKPEIVVPKKVEKPKPKPQPPKPQRKPEPPQEKPADEKPVDTPPST 130
Query: 126 QKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNR 185
K K+ + + +
Sbjct: 131 AKPEKSAAPAPAPTPSPPSTALPS----------------------------WQGDLLSH 162
Query: 186 VIANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVI 244
+ P D +R + ++ F ++ G VL + G L + +
Sbjct: 163 LGKYKKYPEDARRRGMQGVARLRFVVDADGNVLSYSIGNSSGS-----PALDRATMEMIR 217
Query: 245 KSQAFRLSPS 254
++Q P
Sbjct: 218 RAQPLPKPPK 227
>gi|145492624|ref|XP_001432309.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124399420|emb|CAK64912.1| unnamed protein product [Paramecium tetraurelia]
Length = 481
Score = 41.8 bits (96), Expect = 0.10, Method: Composition-based stats.
Identities = 17/158 (10%), Positives = 45/158 (28%), Gaps = 3/158 (1%)
Query: 37 EMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATEN 96
+ + D K ++ Q + Q E + ++
Sbjct: 90 PDILKEFTQIIDKVKHPEKYPQQDQQQSQVQQQLPQQPSMVQSETA---KQKNSIQQQQD 146
Query: 97 ETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRP 156
++ + K Q + + +Q+ +++ S + K +
Sbjct: 147 TNEKENQQKEIQQKEAQQADKQKSEEQQRQEELHIQQQKEQEIHQSELKSKMEKEQQLEE 206
Query: 157 DKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPS 194
+ K L + ++ + +V+NR+ WN
Sbjct: 207 ENKILQEQQKQEQTVLNKEESKKNMVKNRIKTAWNYNY 244
>gi|332186735|ref|ZP_08388478.1| tonB family C-terminal domain protein [Sphingomonas sp. S17]
gi|332013387|gb|EGI55449.1| tonB family C-terminal domain protein [Sphingomonas sp. S17]
Length = 88
Score = 41.8 bits (96), Expect = 0.10, Method: Composition-based stats.
Identities = 10/68 (14%), Positives = 22/68 (32%), Gaps = 6/68 (8%)
Query: 184 NRVIANWNIPSDFKRF-KKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKA 242
+ P + ++ ++ L++ G V+ V G +L AR
Sbjct: 3 GHLQRYRRYPRQAEAARQQGVARVAITLHRSGEVIAVELVHGSG-----YPLLDMEARTT 57
Query: 243 VIKSQAFR 250
V ++
Sbjct: 58 VRRASPLP 65
>gi|29840729|ref|NP_829835.1| hypothetical protein CCA00974 [Chlamydophila caviae GPIC]
gi|29835079|gb|AAP05713.1| conserved hypothetical protein [Chlamydophila caviae GPIC]
Length = 253
Score = 41.8 bits (96), Expect = 0.10, Method: Composition-based stats.
Identities = 27/232 (11%), Positives = 66/232 (28%), Gaps = 17/232 (7%)
Query: 3 LENGLAIS---MILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEE 59
++ L S ++LH + ++LL ++ + + V S K
Sbjct: 1 MKKTLPYSLFAIVLHGVCIILLAYSPTQKKQPKLLPFTEKLVTL----SEPISVVKTHTT 56
Query: 60 PVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMP 119
P Q + E + Q+ + + K + +T S ++ +
Sbjct: 57 PSQQALKAKIEKPHVEKPPQQPSPKTPAEKKKTDSVKKTPSPSKPVKKEQSVAKSQGEQK 116
Query: 120 VSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAI 179
++ DL + D + SS ++
Sbjct: 117 IAAKTNPAKEAKLKAIADLAKTLSQHLEDSDARLADISLPTCRELAINSSLAATQEEELC 176
Query: 180 AIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELV 231
++R ++ ++ V++ L +G + I + + E
Sbjct: 177 QLLREYIVLPFS----------GEVRVKLVLTPQGNIQECILLSEISEAEKQ 218
>gi|261211901|ref|ZP_05926188.1| TolA protein [Vibrio sp. RC341]
gi|260839251|gb|EEX65883.1| TolA protein [Vibrio sp. RC341]
Length = 331
Score = 41.8 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 26/222 (11%), Positives = 73/222 (32%), Gaps = 10/222 (4%)
Query: 51 SSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQAL 110
++K + + + +++ V + ++ + + A + E K +
Sbjct: 117 AAKAEAERKVKEEAAKKAEQERVAKEAAAAKAEQQRIEREKEAKQAEEKAKREKEIAAKA 176
Query: 111 KESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSR 170
++ L + + +K K K + A++ +++ + + + K
Sbjct: 177 EQDRLAKEKAAKDAAEKAKKEKEKAAKAEADRKAQEAALNDIFGSLSDENQQNNAAKQQF 236
Query: 171 KRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTEL 230
AI + N + F+ + +++ +L G + + +
Sbjct: 237 VTSEVGRYGAIYTQLIKQNLLVEDSFRGKQ---CRVNLRLIPTGT---GALLGSLSILDG 290
Query: 231 VRRMLRENARKAVIKSQAFRLS---PSTYKSWRNITLFFVPS 269
R+ ++A+ + F L P + +NI L P
Sbjct: 291 DSRLCA-ATKRAIAQVGTFPLPKDQPDVVEKLKNINLTVAPE 331
>gi|182679107|ref|YP_001833253.1| TonB family protein [Beijerinckia indica subsp. indica ATCC 9039]
gi|182634990|gb|ACB95764.1| TonB family protein [Beijerinckia indica subsp. indica ATCC 9039]
Length = 296
Score = 41.8 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 22/234 (9%), Positives = 54/234 (23%), Gaps = 15/234 (6%)
Query: 5 NGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQF 64
+ +++ H L L P + + + V + +
Sbjct: 29 AAITFAVLAHASLFLALVM---PHDDPPPTPLDAVEVSLVQQGSVETEAAAAPVSDPTLN 85
Query: 65 KGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYD 124
E + Q + + E+ + + + P
Sbjct: 86 DQELAEVQTPTATAQPQVAALAAEAAIKEVEDAIAIPVAQPDPLPMTTPTFMPPPEPVPQ 145
Query: 125 KQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPS--------- 175
+QK KE+ + +K ++ ++ +++
Sbjct: 146 QQKAETVPVKEKPPEVKPEKKKVEKRRAPQSAERAPVVKTGAARAQRAGVEDGAEAVTGQ 205
Query: 176 --QDAIAIVRNRVIANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKINVDVVG 226
A+V + P + V + F + G V G
Sbjct: 206 ARATYGALVLAELHRRQFYPPAARAEGLNGNVGVVFTIGASGRVTSHSITRSSG 259
>gi|17986646|ref|NP_539280.1| TonB protein [Brucella melitensis bv. 1 str. 16M]
gi|17982262|gb|AAL51544.1| tonb protein [Brucella melitensis bv. 1 str. 16M]
Length = 115
Score = 41.8 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 14/89 (15%), Positives = 29/89 (32%), Gaps = 1/89 (1%)
Query: 153 VVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQ 212
K + E S+ + + +++ + N R + + F ++
Sbjct: 3 ADNGAKVAASKRGETSASAGVIWAKWTSRLQSHMARNARFLQGKSRNTRGEAHVAFVIDP 62
Query: 213 KGFVLGKINVDVVGGTELVRRMLRENARK 241
G VL G + + L E AR+
Sbjct: 63 SGNVLSARIAVSSGDPAVDQLAL-EAARR 90
>gi|167580764|ref|ZP_02373638.1| TolA protein [Burkholderia thailandensis TXDOH]
Length = 334
Score = 41.8 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 27/210 (12%), Positives = 56/210 (26%), Gaps = 13/210 (6%)
Query: 61 VVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPV 120
V + K E L + ++ + + E + K+ + ++A E A
Sbjct: 138 VEREKQKQAEKLKQQQLAEQQRKLEQQKLEQQKLEQQKKQEQLAAQKKADAEKAAKAAAA 197
Query: 121 SPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIA 180
+ + +K + Q K + ++
Sbjct: 198 AKANAAAKAKLDKERQARLAQLQGMAGGGSGGGEGLAKSGTGTGSGGNAASPG----YAD 253
Query: 181 IVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENAR 240
VR RV N L + + G VL G + +
Sbjct: 254 KVRRRVKPN---IVWAGERDSLVTVVAIRCTPSGDVLSTSIRRSSGNSGW-----DQAVI 305
Query: 241 KAVIKSQAFRLSPSTYKSWRNITLFFVPSK 270
A+ S + ++ IT+ F ++
Sbjct: 306 SAIQASVPLP-PDTNGRTPSEITITFKAAE 334
>gi|118093534|ref|XP_001234116.1| PREDICTED: similar to titin isoform N2-A [Gallus gallus]
Length = 13256
Score = 41.8 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 11/107 (10%), Positives = 28/107 (26%), Gaps = 7/107 (6%)
Query: 37 EMLSV-------DNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQT 89
+ V + E + KK+ P + + V V E +
Sbjct: 6241 VHIPVPKAEPPPVKVPEEPKRAPPEKKVAVPKREAAPPPKAPEVPKKPVPEEKLPQIPKV 6300
Query: 90 KTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQ 136
+ ++ + + ++ P ++ K E+
Sbjct: 6301 EEAPPAKVPAVPKKPVPKEKVPPAVPKKVEAPPAKVPEVQKRATFEE 6347
>gi|332869634|ref|ZP_08438845.1| putative protein TolA [Acinetobacter baumannii 6013113]
gi|332732681|gb|EGJ63913.1| putative protein TolA [Acinetobacter baumannii 6013113]
Length = 192
Score = 41.8 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 23/181 (12%), Positives = 55/181 (30%), Gaps = 8/181 (4%)
Query: 74 RDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATN 133
Q+ + + + A + K + +K + A + ++ + A
Sbjct: 3 AKAKQQKAAEDAKRKAEADAKAKQQKAAEDAKRKAEADAKAKQQKAAEDAKRKAEADAKA 62
Query: 134 KEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIP 193
K+Q + + + KK +K + + A ++ W++P
Sbjct: 63 KQQKAAEDARRKAEIEAEEKAASAKKAQEEAAQKKGEAKKIASSAKRDFEQKIRRAWDVP 122
Query: 194 SDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSP 253
+ V + F L+ G V + G L + + A+ S + +
Sbjct: 123 TGSSGK---TVSVRFTLSDSGSVSSIVITRSSGDD-----ALDASIKAAIQASAPYPMPS 174
Query: 254 S 254
Sbjct: 175 D 175
>gi|126660067|ref|ZP_01731188.1| hypothetical protein CY0110_12282 [Cyanothece sp. CCY0110]
gi|126618664|gb|EAZ89412.1| hypothetical protein CY0110_12282 [Cyanothece sp. CCY0110]
Length = 315
Score = 41.8 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 15/162 (9%), Positives = 39/162 (24%), Gaps = 1/162 (0%)
Query: 4 ENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQ 63
+S+I H+ FL L + +E + + + + E
Sbjct: 19 RPMFFLSLIFHIGFLSLPLPSSPKLEEKKTEEQEEIQ-EKVEITRLIPPSPQPSPETPKT 77
Query: 64 FKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPY 123
+ + T + T + + + S +P
Sbjct: 78 PPKVKSTPTPQPIQRPPTVRQIPRITTPSPSTQITATPEKTPLQINPEPSPSPTPKQTPT 137
Query: 124 DKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKV 165
K+S++ + I+ + + +
Sbjct: 138 PTPKVSESPTPTPTPTINPELIENDINNLENQNEVASEAGSS 179
>gi|209517116|ref|ZP_03265963.1| TonB family protein [Burkholderia sp. H160]
gi|209502509|gb|EEA02518.1| TonB family protein [Burkholderia sp. H160]
Length = 465
Score = 41.8 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 20/144 (13%), Positives = 42/144 (29%), Gaps = 9/144 (6%)
Query: 125 KQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRN 184
+Q K ++ ++ + ++ K + + D +VR
Sbjct: 329 RQAFDKTPQPAREWITLAELDSSRRSAALLINAVKNFAAAAARQPTSAPKVFDYAELVRQ 388
Query: 185 RVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVI 244
RV N + + G + V G R + A +AV
Sbjct: 389 RVQPN---IVWNGKADHRETVVEVHCTSSGSLESVKIVRSSGD-----RTWDKAAVEAVK 440
Query: 245 KSQAFRLSPSTYKSWRNITLFFVP 268
+S + ++ R+ T+ P
Sbjct: 441 RSDPMPRDENG-ETPRSFTITLRP 463
>gi|48374170|gb|AAT41882.1| hypothetical protein [Fremyella diplosiphon Fd33]
gi|281485543|tpg|DAA06631.1| TPA_inf: TonB-related protein [Fremyella diplosiphon Fd33]
Length = 571
Score = 41.4 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 19/169 (11%), Positives = 43/169 (25%), Gaps = 6/169 (3%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
L S+ HV L N+ +S E ++ + K + P
Sbjct: 25 SLIGSLGFHVAVLASGIGNY----FSRVSPVEEEPIEVTVID--TPEDKKPEQSPQKLEV 78
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
E L + + + K + + + +
Sbjct: 79 NEKAEVLTSSTNNSKTETIVKPENPVKPVPLPAKVELPPPQPKQPVVAEPPIQKLVENLR 138
Query: 126 QKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIP 174
+ I + Q ++ + +K +D V + + S+
Sbjct: 139 KPIEPIKPQVQPVKPETNVAQKPVDPVPAKSVAVNNANPTNSSNSGSNL 187
>gi|170768954|ref|ZP_02903407.1| protein TolA [Escherichia albertii TW07627]
gi|170122026|gb|EDS90957.1| protein TolA [Escherichia albertii TW07627]
Length = 439
Score = 41.4 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 24/130 (18%), Positives = 41/130 (31%), Gaps = 13/130 (10%)
Query: 141 ISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFK 200
S + S KSS D + + + N S +
Sbjct: 321 SSGKNAPKTGGGAKGSNVSSTGSGNTKSSASGAEINDYKNQIATAIASRLNDKSLYVGK- 379
Query: 201 KLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPST--YKS 258
++H +L G VL +E L A AV +++ PS Y+
Sbjct: 380 --TCRLHIKLTTDGTVLSVE-------SEGGDEALCRAALVAVNQAK-LPKPPSQAVYEV 429
Query: 259 WRNITLFFVP 268
+++ +L F P
Sbjct: 430 FKDASLNFKP 439
Score = 39.9 bits (91), Expect = 0.42, Method: Composition-based stats.
Identities = 16/119 (13%), Positives = 47/119 (39%), Gaps = 3/119 (2%)
Query: 2 RLENGLAISMILHVMFLLLLYF-NFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP 60
+L+ + IS +LH++ L + +F+ + S+D + + + K +
Sbjct: 10 KLKRAIIISAVLHIILFAALIWSSFDENMEASAGGGGGSSIDAVMVDSGAVVEQYKRMQN 69
Query: 61 VVQFKGSSQENLVRD--FSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLR 117
S+E L + +E ++ + + + + + ++ + +QA + +
Sbjct: 70 QESSAKRSEEQLKIKERQAAEELREKQAAEQERLKQLEKERLAAQEQKKQAEEAAKQAE 128
>gi|2738770|gb|AAB94544.1| TonB [Vibrio cholerae]
Length = 244
Score = 41.4 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 15/182 (8%), Positives = 42/182 (23%), Gaps = 2/182 (1%)
Query: 9 ISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNED-YHSSKYKKIEEPVVQFKGS 67
+S+ H + L + V + + + +S++ + + + E
Sbjct: 12 LSLAFHALLL-ITTDEAQVFAMPAGNPTQSVSINMVSMPKVAPAQPEQTQTEQSKLESVK 70
Query: 68 SQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQK 127
+ + K + A + + K
Sbjct: 71 PTPVQEVVKTPPAKPKVEPHKPKPQTVKKPVPAEQVPSKSVAKPQPEKVERTAEMAQKPA 130
Query: 128 ISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVI 187
+ Q + I ++ + + +RKR + +
Sbjct: 131 PTPNQQPSQPTAASQGITSQPILVDKPALVSAQVQPRYPRIARKRGIEGTVMYEIWLDAQ 190
Query: 188 AN 189
N
Sbjct: 191 GN 192
>gi|256820804|ref|YP_003142083.1| outer membrane transport energization protein TonB [Capnocytophaga
ochracea DSM 7271]
gi|256582387|gb|ACU93522.1| outer membrane transport energization protein TonB [Capnocytophaga
ochracea DSM 7271]
Length = 275
Score = 41.4 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 21/239 (8%), Positives = 63/239 (26%), Gaps = 11/239 (4%)
Query: 10 SMILHVMFLLLLYFNFNVQLLVPISRREMLSVD------NIYNEDYHSSKYKKIEEPVVQ 63
S+ L + + L+ F + + V+ + + +E
Sbjct: 12 SLALTTVVMCLVIFILFFAGMKYLDPPPEKGVEVIYGVDLVGMGERTPPPSAAKQEETKT 71
Query: 64 FKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPY 123
+ E + + +++ + + K ++ + + P
Sbjct: 72 PPQTQPEQSTSQEVKENLLAQDNNEEVSVPEVPKKKEKKKETPKKDTPKESPKPAPKPSR 131
Query: 124 DKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVR 183
+ + G + + + + ++
Sbjct: 132 ETSDALSNILGAANAGGSGISGQGDGNQPGYQGQIDGSQYANSYYGSGGGNGTGKGWGLK 191
Query: 184 NR-VIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARK 241
R + + +P + ++ RV + ++++ G V+ L E ARK
Sbjct: 192 GRTIASQGKVPQNC--NEEGRVVVQIEVDRSGKVVKATAGVKGTTNSAQC--LLEAARK 246
>gi|39748624|dbj|BAD04987.1| tonB1 protein [Photobacterium damselae subsp. piscicida]
Length = 252
Score = 41.4 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 27/240 (11%), Positives = 80/240 (33%), Gaps = 26/240 (10%)
Query: 8 AISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKG- 66
A+S+I+H + L + + N + ++ +S++ + + + + V+ +
Sbjct: 11 AVSVIIHGLILSAVP-SQNAIAMPIGNQIAPVSLNLVTAPIAPPPPAQDVAKAEVKPQKS 69
Query: 67 -SSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
+ + + +V++ + + K + ++ + ++ S
Sbjct: 70 VKKTQQIEQKTAVKKLVKKTTPIKKAAKKVANKTTKTKKAEQKPIVKNRDREPVKSATKP 129
Query: 126 QKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNR 185
Q SK N+ + + +K + + P+ + + P ++ +
Sbjct: 130 QPQSKPKNQTSQVVNTTNNKKALLSSGTQSPELVSRPTFATRPGPVSYPRLAKRRGIQGQ 189
Query: 186 VIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIK 245
V + ++ KG + + + G +L + A KA+ K
Sbjct: 190 ------------------VMVEIWIDPKGKQIKQKVISSSGT-----EILDQAALKAIKK 226
>gi|254000462|ref|YP_003052525.1| hypothetical protein Msip34_2761 [Methylovorus sp. SIP3-4]
gi|253987141|gb|ACT51998.1| conserved hypothetical protein [Methylovorus sp. SIP3-4]
Length = 279
Score = 41.4 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 21/229 (9%), Positives = 56/229 (24%), Gaps = 17/229 (7%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
+ IS+++H + L + + P + S + + K + +P Q +
Sbjct: 13 AIVISLLIHAILLFTVII--HPLDSGPEAEPAESSQIVMQLGPKAAPKAAETPQPSTQAE 70
Query: 66 GSSQE----------NLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESAL 115
V S + + Q + +
Sbjct: 71 PEPAPAPKAPPKAVSKPVSKPSKPTSPPVMAAQPPARDQAPTPLDRRVPPQPAPEPDMSP 130
Query: 116 LRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPS 175
+ Y KQ+ + + A K + + ++++
Sbjct: 131 PPTDMMSYVKQQQDRRRAQGDPSILNEDAAAKDRGPTADEIREANIQRNLKEAGGGVFQI 190
Query: 176 QDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDV 224
+ V W S+ + + + G + + +
Sbjct: 191 TQMSSRGAKFVFRGWRYFSNPRTE-----YIEVEAPPDGDIRRAVVKRM 234
>gi|256822839|ref|YP_003146802.1| TonB family protein [Kangiella koreensis DSM 16069]
gi|256796378|gb|ACV27034.1| TonB family protein [Kangiella koreensis DSM 16069]
Length = 410
Score = 41.4 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 14/119 (11%), Positives = 33/119 (27%), Gaps = 19/119 (15%)
Query: 150 DTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDF------------- 196
V+ E + A +R+ + + P
Sbjct: 277 PKQEVKQPIVEEVPAGPTEEELAAMRSSYNAAIRSHYVPFFQYPVQEIMRRHGKSALLNP 336
Query: 197 -KRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPS 254
K V + ++++ G ++G V G ++L + A+ + + P
Sbjct: 337 RKGRTHGEVTIQLEVDRDGELVGGSLVSSSGE-----KILDDAVMSALFDAVPYPAMPE 390
>gi|119631418|gb|EAX11013.1| titin, isoform CRA_a [Homo sapiens]
gi|119631419|gb|EAX11014.1| titin, isoform CRA_a [Homo sapiens]
Length = 34942
Score = 41.4 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 16/136 (11%), Positives = 37/136 (27%), Gaps = 5/136 (3%)
Query: 23 FNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDF--SVQE 80
+ P ++ + + + + + KK E P V QE ++ + +
Sbjct: 11868 VAVPKKPEAPRAKVPEAAQEVVPEKKIPKAPIKKPEAPAVTVPEVPQEAAEKEIPVAPPK 11927
Query: 81 NGDRFSDQTKTHATENETKRSS---SSKGEQALKESALLRMPVSPYDKQKISKATNKEQD 137
+ E ++ + K E V K ++ E
Sbjct: 11928 KPEAPIVPVPEVPQEIVPEKKTLVLPKKPEVPPVTVPEAPKEVVLEKKVPLAPPKKPEVP 11987
Query: 138 LQGISFAEKKSIDTVV 153
+ A K+ +
Sbjct: 11988 PVKVPEAPKEVVPEKK 12003
Score = 39.9 bits (91), Expect = 0.39, Method: Composition-based stats.
Identities = 3/77 (3%), Positives = 14/77 (18%)
Query: 49 YHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQ 108
+K ++ + V K + + + +
Sbjct: 10954 APPAKVPEVPKKPVPEKKVPVPAPKKVEAPPAKVPEVPKKLIPEEKKPTPVPKKVEAPPP 11013
Query: 109 ALKESALLRMPVSPYDK 125
+ + +
Sbjct: 11014 KVPKKREPVPVPVALPQ 11030
Score = 38.7 bits (88), Expect = 0.98, Method: Composition-based stats.
Identities = 10/116 (8%), Positives = 22/116 (18%)
Query: 29 LLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQ 88
VP E + V E +K ++ + V + + + +
Sbjct: 10906 PEVPKKPEEKVPVLIPKKEKPPPAKVPEVPKKPVPEEKVPVPVPKKVEAPPAKVPEVPKK 10965
Query: 89 TKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFA 144
+ E +P K +
Sbjct: 10966 PVPEKKVPVPAPKKVEAPPAKVPEVPKKLIPEEKKPTPVPKKVEAPPPKVPKKREP 11021
Score = 35.6 bits (80), Expect = 7.9, Method: Composition-based stats.
Identities = 13/160 (8%), Positives = 36/160 (22%), Gaps = 3/160 (1%)
Query: 23 FNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQ---ENLVRDFSVQ 79
+ PI + + + + K PV + + E V +
Sbjct: 11923 VAPPKKPEAPIVPVPEVPQEIVPEKKTLVLPKKPEVPPVTVPEAPKEVVLEKKVPLAPPK 11982
Query: 80 ENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQ 139
+ + K+ + ++ + +K ++
Sbjct: 11983 KPEVPPVKVPEAPKEVVPEKKVPVTPPKKPEVPPVKVPEAPIEVVPEKKMPLAPPKKPEV 12042
Query: 140 GISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAI 179
+ + V + K E K + +
Sbjct: 12043 PPVKVPEAPKEVVPEKKVPSAPPKKPEVPPVKVPEAPKEV 12082
>gi|134058137|emb|CAK38331.1| unnamed protein product [Aspergillus niger]
Length = 645
Score = 41.4 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 16/159 (10%), Positives = 41/159 (25%), Gaps = 3/159 (1%)
Query: 27 VQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFS 86
+ P + V+ D S K + + + V+ Q D
Sbjct: 119 MSAKEPPPEDTLSPVEQPP-TDITSPKEQ--RTDNNESVEEPIPDDVQSHGKQPADDIQP 175
Query: 87 DQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEK 146
+ + + + E ++ V + Q L+ +
Sbjct: 176 PREQPLNQNESLGKQPTDNKEPVEEQRPNDITSVEELPPDDMESLREPHQKLKEKKYRNS 235
Query: 147 KSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNR 185
+ + R +K + + S + ++ + R
Sbjct: 236 EKQCQKLNRRYRKISKQQQKMSKQHLKTNKQYLREKRQH 274
>gi|197119742|ref|YP_002140169.1| hypothetical protein Gbem_3378 [Geobacter bemidjiensis Bem]
gi|197089102|gb|ACH40373.1| conserved hypothetical protein [Geobacter bemidjiensis Bem]
Length = 387
Score = 41.4 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 15/145 (10%), Positives = 41/145 (28%), Gaps = 4/145 (2%)
Query: 7 LAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNE----DYHSSKYKKIEEPVV 62
+A S+++H+ FL ++ + + + VD K ++ +P+
Sbjct: 15 IAFSVLVHLAFLFPVWKYGRYDFGNAVLPLQAVMVDLAQATPPAVPVTKPKLPEVAKPMP 74
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
+ + + + + + + A E + ++ A
Sbjct: 75 VRLKARRNVVAAEPTTPPLPPQIGNNAIEPARPAEPATPLVPETVTKKEKEAPKASASPL 134
Query: 123 YDKQKISKATNKEQDLQGISFAEKK 147
K I + K+
Sbjct: 135 PKKGTIPLVHPPLRQAGEFLATAKE 159
>gi|109482524|ref|XP_001076610.1| PREDICTED: E1A binding protein p300 [Rattus norvegicus]
Length = 2413
Score = 41.4 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 24/167 (14%), Positives = 43/167 (25%), Gaps = 3/167 (1%)
Query: 28 QLLVPISRREM-LSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFS 86
P +M + +D E + E K E R ++
Sbjct: 966 PEKQPSQEVKMEVKMDVDQPEPADAQPDDTKEAKAEDGKVEPTETEERGPELKTEVKEEE 1025
Query: 87 DQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEK 146
DQ T A ++ S K +E MP ++ ++ Q +
Sbjct: 1026 DQPSTSAAQSSPAPGQSKKKIFKPEELRQALMPTLEALYRQDPESLPFRQPVDPQLLGIP 1085
Query: 147 KSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIP 193
D V D + K++ + I + W
Sbjct: 1086 DYFDIVKSPMDLSTIKRKLDTGQYQEPW--QYIDDIWLMFNNAWLYN 1130
>gi|224436757|ref|ZP_03657757.1| cag island protein,DNA transfer protein (virD4-like) [Helicobacter
cinaedi CCUG 18818]
Length = 681
Score = 41.4 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 20/154 (12%), Positives = 50/154 (32%), Gaps = 1/154 (0%)
Query: 35 RREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHAT 94
+ +++ + E + + + + + +QE+ S QE D Q +
Sbjct: 522 QTQIIDMKETPQEAQPTPPNPQAIQNTQEPQQQAQESQEPQISEQEQQDIKQAQEEQALY 581
Query: 95 ENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVV 154
E E + +E M ++K +++D+ + A K D+ +
Sbjct: 582 EYEKALQEQEALKDKSQEDLQKEMQSLLEKQRKEYVYKIEDKDINAVLQAPLKK-DSYIP 640
Query: 155 RPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIA 188
+ + + Q ++R R+
Sbjct: 641 KETFINIQKETYTLRENGYKLQITDELIRERIQR 674
>gi|293360733|ref|XP_576312.3| PREDICTED: E1A binding protein p300 [Rattus norvegicus]
Length = 2448
Score = 41.4 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 24/167 (14%), Positives = 43/167 (25%), Gaps = 3/167 (1%)
Query: 28 QLLVPISRREM-LSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFS 86
P +M + +D E + E K E R ++
Sbjct: 1001 PEKQPSQEVKMEVKMDVDQPEPADAQPDDTKEAKAEDGKVEPTETEERGPELKTEVKEEE 1060
Query: 87 DQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEK 146
DQ T A ++ S K +E MP ++ ++ Q +
Sbjct: 1061 DQPSTSAAQSSPAPGQSKKKIFKPEELRQALMPTLEALYRQDPESLPFRQPVDPQLLGIP 1120
Query: 147 KSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIP 193
D V D + K++ + I + W
Sbjct: 1121 DYFDIVKSPMDLSTIKRKLDTGQYQEPW--QYIDDIWLMFNNAWLYN 1165
>gi|254708461|ref|ZP_05170289.1| TonB family protein [Brucella pinnipedialis M163/99/10]
Length = 153
Score = 41.4 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 21/129 (16%), Positives = 39/129 (30%), Gaps = 2/129 (1%)
Query: 114 ALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRI 173
V QK K + + + + S V K SK ++S
Sbjct: 1 KPEPKKVEKLKPQKPKPEKVKPKKAEKAAETREASAPRVDADNGAKVAASKRGETSASAG 60
Query: 174 PS-QDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVR 232
+ +++ + N R + + F ++ G VL G + +
Sbjct: 61 VIWAKWTSRLQSHMARNARFLQGKSRNTRGEAHVAFVIDPSGNVLSARIAVSSGDPAVDQ 120
Query: 233 RMLRENARK 241
L E AR+
Sbjct: 121 LAL-EAARR 128
>gi|34787216|emb|CAE46937.1| hasB [Serratia marcescens]
Length = 263
Score = 41.4 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 25/228 (10%), Positives = 57/228 (25%), Gaps = 29/228 (12%)
Query: 28 QLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSD 87
+ P + V + +
Sbjct: 41 KAEPPWVPPPAVMV------------LMAAAPQAPAEAKQPPGQRTPPPQAEPSAPPEPL 88
Query: 88 QTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKK 147
+ + K ++ K +P +P ++ I+ +EQ +
Sbjct: 89 PLVKAPDATQPNIAVPPKQKKPPKPVKKNNLPRTPPQERIIAPPKVQEQSVGAPPPGRAD 148
Query: 148 SIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRV-KM 206
+ + + + + + R+ P D R K+ V ++
Sbjct: 149 KTAAP-----------QTRLTPYAQAGEDNWRSRISGRLNRFKRYPKDALRLKRQGVGQV 197
Query: 207 HFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPS 254
F L+++G VL V G L + V ++ P+
Sbjct: 198 RFTLDRQGHVLAVTLVSSAG-----LPSLDREIQALVKRASPLPTPPA 240
>gi|121586426|ref|ZP_01676214.1| tonB1 protein [Vibrio cholerae 2740-80]
gi|121730189|ref|ZP_01682580.1| tonB1 protein [Vibrio cholerae V52]
gi|147671825|ref|YP_001215168.1| tonB1 protein [Vibrio cholerae O395]
gi|153819216|ref|ZP_01971883.1| tonB1 protein [Vibrio cholerae NCTC 8457]
gi|227812476|ref|YP_002812486.1| tonB1 protein [Vibrio cholerae M66-2]
gi|298499689|ref|ZP_07009495.1| tonB1 protein [Vibrio cholerae MAK 757]
gi|121549404|gb|EAX59433.1| tonB1 protein [Vibrio cholerae 2740-80]
gi|121628064|gb|EAX60608.1| tonB1 protein [Vibrio cholerae V52]
gi|126510250|gb|EAZ72844.1| tonB1 protein [Vibrio cholerae NCTC 8457]
gi|146314208|gb|ABQ18748.1| tonB1 protein [Vibrio cholerae O395]
gi|227011618|gb|ACP07829.1| tonB1 protein [Vibrio cholerae M66-2]
gi|227015557|gb|ACP11766.1| tonB1 protein [Vibrio cholerae O395]
gi|297541670|gb|EFH77721.1| tonB1 protein [Vibrio cholerae MAK 757]
Length = 249
Score = 41.4 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 15/182 (8%), Positives = 42/182 (23%), Gaps = 2/182 (1%)
Query: 9 ISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNED-YHSSKYKKIEEPVVQFKGS 67
+S+ H + L + V + + + +S++ + + + E
Sbjct: 17 LSLAFHALLL-ITTDEAQVFAMPAGNPTQSVSINMVSMPKVAPAQPEQTQTEQSKLESVK 75
Query: 68 SQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQK 127
+ + K + A + + K
Sbjct: 76 PTPVQEVVKTPPAKPKVEPHKPKPQTVKKPVPAEQVPSKSVAKPQPEKVERTAEMAQKPA 135
Query: 128 ISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVI 187
+ Q + I ++ + + +RKR + +
Sbjct: 136 PTPNQQPSQPTAASQGITSQPILVDKPALVSAQVQPRYPRIARKRGIEGTVMYEIWLDAQ 195
Query: 188 AN 189
N
Sbjct: 196 GN 197
>gi|289207750|ref|YP_003459816.1| protein TolA [Thioalkalivibrio sp. K90mix]
gi|288943381|gb|ADC71080.1| protein TolA [Thioalkalivibrio sp. K90mix]
Length = 337
Score = 41.4 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 17/120 (14%), Positives = 39/120 (32%), Gaps = 7/120 (5%)
Query: 149 IDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHF 208
+ +E E+ ++ + A V++ V W PSD + V +
Sbjct: 224 EREQERLAEARERREAAERQAQMDREVDEWRAQVQSVVQRRWRQPSDIDSSDRAIVLVRV 283
Query: 209 QLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPSTYKSWRNITLFFVP 268
N+ G ++ G + ++ R+ + + + P + + F P
Sbjct: 284 --NETGRIIDFDIESCSGDSR-----FCDSVRQTMDRLSSLPRPPDASAVRGGVRIRFEP 336
>gi|218677849|ref|ZP_03525746.1| TonB family protein [Rhizobium etli CIAT 894]
Length = 125
Score = 41.4 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 15/107 (14%), Positives = 32/107 (29%), Gaps = 9/107 (8%)
Query: 162 LSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKK-LRVKMHFQLNQKGFVLGKI 220
+ + V+ R+ +P ++KR + V++ ++ G +
Sbjct: 19 TASGRGDGIGSAAVANYPGKVQKRIRRAIRVPDEYKRMGGAISVRLRLTIDGTGRLSSVS 78
Query: 221 NVDVVGGTELVRRMLRENARKAVIKSQAFRLSPSTYKSWRNITLFFV 267
G + L + A V ++ F P W F
Sbjct: 79 VAGSSGIPD-----LDKAALDGVRRAAPFPPLP---PEWGKANWSFT 117
>gi|238026338|ref|YP_002910569.1| hypothetical protein bglu_1g06720 [Burkholderia glumae BGR1]
gi|237875532|gb|ACR27865.1| Hypothetical protein bglu_1g06720 [Burkholderia glumae BGR1]
Length = 347
Score = 41.4 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 34/214 (15%), Positives = 62/214 (28%), Gaps = 11/214 (5%)
Query: 59 EPVVQFKGSSQENLVRDFSVQENGD--RFSDQTKTHATENETKRSSSSKGEQALKESALL 116
E Q + Q+ L E + Q + A + K+ + K A E+A
Sbjct: 143 EKQRQAEKLRQQQLAEQQKKLEQQKLEQQRKQEQAQAQADAEKKEQAEKAAAAKAEAAAK 202
Query: 117 RMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQ 176
+ + + A + + A+ ++ + S S S
Sbjct: 203 AKAEAAAKAKADAAAKARLDKERQARLAQLQNQAGGGQGGGEGLARSGTGTGSGGNAASP 262
Query: 177 DAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLR 236
V+ RV N L ++ + + G VLG G
Sbjct: 263 GYADKVKRRVKPN---IIWNGERSGLETRVQVRCSPNGDVLGVTVTRSSGNPGW-----D 314
Query: 237 ENARKAVIKSQAFRLSPSTYKSWRNITLFFVPSK 270
+ AV S + + NIT+ F ++
Sbjct: 315 DAVVNAVRASTPLPPDVNG-STPSNITITFRAAE 347
>gi|253699504|ref|YP_003020693.1| hypothetical protein GM21_0868 [Geobacter sp. M21]
gi|251774354|gb|ACT16935.1| conserved hypothetical protein [Geobacter sp. M21]
Length = 388
Score = 41.4 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 16/151 (10%), Positives = 40/151 (26%), Gaps = 3/151 (1%)
Query: 7 LAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYK---KIEEPVVQ 63
+A+S++ H++FL + + + + VD K +
Sbjct: 15 IALSVLAHLVFLFPFWKYGRFHFGNTVLPLQAVMVDLAQASPQAEPVKKAHRPEAKSTPI 74
Query: 64 FKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPY 123
+ + R ++ A + + + E++ M +P
Sbjct: 75 MAAPAAIHSPRPQQSEQVHAAEPAGPAKLAAPLVPAIRTDMESDAEPPENSAAVMTPTPP 134
Query: 124 DKQKISKATNKEQDLQGISFAEKKSIDTVVV 154
+K + + Q F
Sbjct: 135 APKKAASYLVQPPLRQAGEFLASAKERLTYQ 165
>gi|242279571|ref|YP_002991700.1| hypothetical protein Desal_2101 [Desulfovibrio salexigens DSM 2638]
gi|242122465|gb|ACS80161.1| hypothetical protein Desal_2101 [Desulfovibrio salexigens DSM 2638]
Length = 471
Score = 41.4 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 18/162 (11%), Positives = 56/162 (34%), Gaps = 6/162 (3%)
Query: 8 AISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSS---KYKKIEEPVVQF 64
+S+++H +L++ F F+ L ++ + + + + K+ +P+ +
Sbjct: 7 LLSILMH---ILIVIFVFDFVELTHDQESNGFGIELVSLVEKKAVAVHEPKQRVKPLRRE 63
Query: 65 KGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYD 124
+ + + + R + + K E +T R+ + + A +P +
Sbjct: 64 RVKIKPEQFNESIRTDRPQRRASEIKVERAERKTVRTDHKSAPKPASKPAAESVPSTHKS 123
Query: 125 KQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVE 166
I T+ D + + ++ + + +
Sbjct: 124 YPHIETGTSDNPDAVILRQGKGITVGNSTMVLKRGSEARSLS 165
>gi|325281802|ref|YP_004254344.1| hypothetical protein Odosp_3205 [Odoribacter splanchnicus DSM
20712]
gi|324313611|gb|ADY34164.1| hypothetical protein Odosp_3205 [Odoribacter splanchnicus DSM
20712]
Length = 251
Score = 41.4 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 31/239 (12%), Positives = 72/239 (30%), Gaps = 29/239 (12%)
Query: 4 ENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQ 63
G+ ++I H + L + + + + + E++ E + ++ +E + Q
Sbjct: 17 RRGIMGTVIFH-LVLAIFLLSMEISRIQVHTEMEIVMDTPTPEERQKKEEEQQRKEEIRQ 75
Query: 64 FKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPY 123
KT E E S + E A++ V Y
Sbjct: 76 --------------------------KTSQEEVERMLRSIAVNENAVQPEKRADASVQQY 109
Query: 124 DKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVR 183
+ + + + + + +K + K S ++
Sbjct: 110 VDEILKELEEEGNSGRYKAQRDKNYQKDSLQNDRDKREQELDSLKSTFYAGESSVSYNLK 169
Query: 184 NRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINV-DVVGGTELVRRMLRENARK 241
+R IP + +V + +N KG V + D + + R+ + A++
Sbjct: 170 DRYARFLPIPVFKCEYGG-KVVVEILVNPKGVVQKAKILEDQSQSDDCLWRVAADAAKR 227
>gi|115437950|ref|XP_001217941.1| predicted protein [Aspergillus terreus NIH2624]
gi|114188756|gb|EAU30456.1| predicted protein [Aspergillus terreus NIH2624]
Length = 565
Score = 41.4 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 16/185 (8%), Positives = 49/185 (26%)
Query: 1 MRLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP 60
+ L A+S+ LH+ LLL+ + +P S + + +
Sbjct: 43 LVLTCNTALSLYLHLSVRLLLHHSGQHATSLPYSGLLTVPCSYFQLSNMARKRPAPEAIE 102
Query: 61 VVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPV 120
+ ++ + + + +T + + + P+
Sbjct: 103 PTTASKRGRTSMTKKTPAARTQETARKRVVAQKKPRQTVHAPTQEEIAEYNAEEQATAPI 162
Query: 121 SPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIA 180
+ ++ + + + ++ + + S+ A A
Sbjct: 163 GQAKTTSTEREIAAPKNQETTTATRPNNRRKQTAPNKNQKATASTKPKRAAAPKSRKATA 222
Query: 181 IVRNR 185
R +
Sbjct: 223 STRQK 227
>gi|89093287|ref|ZP_01166237.1| ferric siderophore transporter, periplasmic energy transduction
protein TonB [Oceanospirillum sp. MED92]
gi|89082583|gb|EAR61805.1| ferric siderophore transporter, periplasmic energy transduction
protein TonB [Oceanospirillum sp. MED92]
Length = 259
Score = 41.4 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 29/251 (11%), Positives = 71/251 (28%), Gaps = 25/251 (9%)
Query: 5 NGLAISMILHVMFLLLLYFNFNVQLLVPI-SRREMLSVDNIYNEDYHSSKYKKIEEPVVQ 63
G AIS++LH + Y N N + + S+ + + + P+
Sbjct: 16 AGGAISLMLHAGGVW--YLNQNNPPNLISGHLPQAGSIKLVMHAAEPKAVSAPPILPIPI 73
Query: 64 FKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPY 123
+ + + + T + + K K + K P+
Sbjct: 74 KPPAPVKQPPVEEKAK------PSSTPKPKPKPKPKPKPKPKPKPKPKPKPEQAKPIIDS 127
Query: 124 DKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVR 183
+ A + ++ + + E + + A +
Sbjct: 128 QPVEKHAAIAEHKESRNPLATHSPATLHEASAQRPAEKS--------AAVLKDEHFAELV 179
Query: 184 NRVIANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKA 242
R+ + P ++ + +V L+ +G + ++ R+ ++ +A
Sbjct: 180 KRIDKHKQYPRRAQKRNIEGQVSFILHLDSQGNLQSFEWINGN-------RLFYKSTLEA 232
Query: 243 VIKSQAFRLSP 253
V S L
Sbjct: 233 VRNSLPLPLPK 243
>gi|257470001|ref|ZP_05634093.1| TonB protein [Fusobacterium ulcerans ATCC 49185]
Length = 245
Score = 41.4 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 27/244 (11%), Positives = 59/244 (24%), Gaps = 31/244 (12%)
Query: 3 LENGLAISMILHVMFLLLLYF--NFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP 60
++ I+++LH M L S ++ + V +
Sbjct: 1 MKRYFIIALLLHGMLFFKLSLPTVTKDLDTKENSLKQSVPVTFTQVSKAAPVAAAPPQPV 60
Query: 61 VVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPV 120
K + + + K +
Sbjct: 61 AEPPKPKEIPKKEVKPETPKPVPKKTIPKKDIP-----------------------KKET 97
Query: 121 SPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIA 180
+ K K K + S + + D P LL+ + + +
Sbjct: 98 VKEPEAKEVKKVKKASETSESSASNTSTGDHNSSIPSMNSLLTANADGTYNAVSNHGIKY 157
Query: 181 IVRNRVIANW-NIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENA 239
+ + + + + KK+ VK F ++Q G V +D +
Sbjct: 158 KITREITPTYPKQAENIRYRKKVIVKAKFLVDQSGNVKNISIIDSHSKLG-----FDQAV 212
Query: 240 RKAV 243
A+
Sbjct: 213 IDAL 216
>gi|291227505|ref|XP_002733725.1| PREDICTED: futsch protein-like [Saccoglossus kowalevskii]
Length = 1994
Score = 41.4 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 15/141 (10%), Positives = 41/141 (29%), Gaps = 1/141 (0%)
Query: 26 NVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRF 85
P S + + V+ ++ S+ +E + S + F Q +
Sbjct: 1293 TFDEPPPPSEVKEIPVE-ATFDEQPPSEEIPVEATFDEQPPSEEIPAEATFDEQPPSEEI 1351
Query: 86 SDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAE 145
+ + ++ + + + +D+ S+ E +E
Sbjct: 1352 PAEATFDEQQQPPSEEIPAEATFDEQPPSEEISAEATFDQSPSSEEIPAEATFDEQPPSE 1411
Query: 146 KKSIDTVVVRPDKKELLSKVE 166
+ T P +E+ ++
Sbjct: 1412 ISAEATFDEPPPSEEIPAEAT 1432
>gi|163853213|ref|YP_001641256.1| hypothetical protein Mext_3811 [Methylobacterium extorquens PA1]
gi|163664818|gb|ABY32185.1| conserved hypothetical protein [Methylobacterium extorquens PA1]
Length = 157
Score = 41.0 bits (94), Expect = 0.15, Method: Composition-based stats.
Identities = 20/98 (20%), Positives = 43/98 (43%), Gaps = 5/98 (5%)
Query: 159 KELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLG 218
S + + +P+ + A +R + + W +P+D + + + F LN+ G + G
Sbjct: 28 SAAPSTLASAQTVSLPAVNNWAELRAALASCWTVPADTEGSQ---IAFRFGLNKTGGMRG 84
Query: 219 KINVDVV--GGTELVRRMLRENARKAVIKSQAFRLSPS 254
V G + R+ E A +A+ + R++P+
Sbjct: 85 PPLVTSRQLKGDQEARKRFEEAAFEALSRCFPMRITPA 122
>gi|118114669|ref|XP_423552.2| PREDICTED: similar to ALR, partial [Gallus gallus]
Length = 1172
Score = 41.0 bits (94), Expect = 0.15, Method: Composition-based stats.
Identities = 8/99 (8%), Positives = 23/99 (23%)
Query: 52 SKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALK 111
+ + + K E + + ++ + + + +
Sbjct: 271 PPDEPPVDEMPPEKPPLDEQHLEEQPPEKPPLDEQPPIELPSEKELLDEQPPKELHPEKP 330
Query: 112 ESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSID 150
L + P D+ S+ E E +
Sbjct: 331 LLDELPLAEQPPDEPPPSEQHLDELPTNEAPLDELLPKE 369
>gi|99080193|ref|YP_612347.1| TonB-like [Ruegeria sp. TM1040]
gi|99036473|gb|ABF63085.1| TonB-like protein [Ruegeria sp. TM1040]
Length = 304
Score = 41.0 bits (94), Expect = 0.15, Method: Composition-based stats.
Identities = 16/218 (7%), Positives = 52/218 (23%), Gaps = 6/218 (2%)
Query: 32 PISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENL-VRDFSVQENGDRFSDQTK 90
P+ V + V + + S +
Sbjct: 73 PVPPAPTTQVSATPIAPVSTPASAPRSAAVSAPVMPAVPPVTEASPSPIAAAVAPVEAPA 132
Query: 91 THATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSID 150
++ + ++ + LR P + + ++ +
Sbjct: 133 REVQPDQAEALDTASELAPQESPRPLRRPEAAPQARDKAETQAPAAPAPRGNSTVNARAG 192
Query: 151 TVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQL 210
+ ++ + + + A + +V+ + + + + F +
Sbjct: 193 SETGAEQQRASQAASTRPAAGSGAGNAAASNYPGQVMRKISRVRKPRTSVRGVAHVSFVI 252
Query: 211 NQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQA 248
G + G TE L + A + + ++
Sbjct: 253 GSGGQLASVRIRKSSGSTE-----LDQLALQQIRRAAP 285
>gi|209885839|ref|YP_002289696.1| TonB like protein [Oligotropha carboxidovorans OM5]
gi|209874035|gb|ACI93831.1| TonB like protein [Oligotropha carboxidovorans OM5]
Length = 265
Score = 41.0 bits (94), Expect = 0.15, Method: Composition-based stats.
Identities = 20/239 (8%), Positives = 56/239 (23%), Gaps = 23/239 (9%)
Query: 8 AISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGS 67
+++LH + +F+ + V + S
Sbjct: 20 IAALVLHGAVAAVAVASFSGTEDDEELGAAGIEVGLEFLAPRGEITDLPPGPDTEASAAS 79
Query: 68 SQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQK 127
+ +Q + + + S D K
Sbjct: 80 PE---------------VVEQKAEVKESDLPQEKPVESEDPDRVVSPDKATDPKENDPNK 124
Query: 128 ISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVI 187
++ + + + L S K+ + +
Sbjct: 125 AARQQTASTESVAAEATAMPTSEAAQQSDRSMTLAQGTGAS--KQRIRATWQKELVAHLD 182
Query: 188 ANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKS 246
+ P+D +++ + F++++ G ++ G E + A + +S
Sbjct: 183 RHKRYPADRSDV-SVKIMVSFEIDRTGRLIATTIAQGSGDPE-----FDQAALAMLKRS 235
>gi|110681316|ref|YP_684323.1| hypothetical protein RD1_4199 [Roseobacter denitrificans OCh 114]
gi|109457432|gb|ABG33637.1| conserved domain protein [Roseobacter denitrificans OCh 114]
Length = 311
Score = 41.0 bits (94), Expect = 0.15, Method: Composition-based stats.
Identities = 19/208 (9%), Positives = 48/208 (23%), Gaps = 9/208 (4%)
Query: 45 YNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSS 104
+ E + T A +E + +
Sbjct: 90 TITATMPPAAVTAPVASTVAVTGPLATTAPSVAQAEPNVASAPVTPQGALLSEPVTAEAF 149
Query: 105 KGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSK 164
A + + +I + EQ + + + + R +
Sbjct: 150 TSPVAKETDSPTLSMRPKTRPPEIMERAKAEQTARAQATPQPRGNAQADTRRGAATGVRT 209
Query: 165 VEKSSRKRIPSQDAIAI----VRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKI 220
+++ +Q A RV A + + ++ F++ G +
Sbjct: 210 GTSTTQGSAIAQTAGNADVSNYPGRVSAAVARQPLPRARTRGVARVSFKIAGNGGLASVG 269
Query: 221 NVDVVGGTELVRRMLRENARKAVIKSQA 248
G + L A + ++
Sbjct: 270 LAKSSGNQD-----LDRAALNLIRRAAP 292
>gi|313143252|ref|ZP_07805445.1| VirD [Helicobacter cinaedi CCUG 18818]
gi|313128283|gb|EFR45900.1| VirD [Helicobacter cinaedi CCUG 18818]
Length = 671
Score = 41.0 bits (94), Expect = 0.16, Method: Composition-based stats.
Identities = 20/154 (12%), Positives = 50/154 (32%), Gaps = 1/154 (0%)
Query: 35 RREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHAT 94
+ +++ + E + + + + + +QE+ S QE D Q +
Sbjct: 512 QTQIIDMKETPQEAQPTPPNPQAIQNTQEPQQQAQESQEPQISEQEQQDIKQAQEEQALY 571
Query: 95 ENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVV 154
E E + +E M ++K +++D+ + A K D+ +
Sbjct: 572 EYEKALQEQEALKDKSQEDLQKEMQSLLEKQRKEYVYKIEDKDINAVLQAPLKK-DSYIP 630
Query: 155 RPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIA 188
+ + + Q ++R R+
Sbjct: 631 KETFINIQKETYTLRENGYKLQITDELIRERIQR 664
>gi|291443428|ref|ZP_06582818.1| cob(II)yrinic acid a,c-diamide reductase [Streptomyces roseosporus
NRRL 15998]
gi|291346375|gb|EFE73279.1| cob(II)yrinic acid a,c-diamide reductase [Streptomyces roseosporus
NRRL 15998]
Length = 901
Score = 41.0 bits (94), Expect = 0.16, Method: Composition-based stats.
Identities = 14/149 (9%), Positives = 38/149 (25%)
Query: 31 VPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTK 90
P + V+ +E E + + Q +
Sbjct: 112 TPEPEAQAAPVEAAPEHRAPVQASPVVEPVAQPEPVVQPEQVAQPEQEQPVEPAQAVAVA 171
Query: 91 THATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSID 150
+ + ++ EQ E + P ++ + A ++ G + E++
Sbjct: 172 EGQEAVVAREPAVAQPEQVAAELTPEPVQPEPVAEEPVEPAEPVAEETAGEAAPEQEPAP 231
Query: 151 TVVVRPDKKELLSKVEKSSRKRIPSQDAI 179
T + E + + + +
Sbjct: 232 TPEPAVAETEPEAAPAIAPDAEDGTGPEV 260
>gi|46143304|ref|ZP_00135502.2| COG0810: Periplasmic protein TonB, links inner and outer membranes
[Actinobacillus pleuropneumoniae serovar 1 str. 4074]
gi|126207564|ref|YP_001052789.1| protein TonB2 [Actinobacillus pleuropneumoniae L20]
gi|126096356|gb|ABN73184.1| protein TonB2 [Actinobacillus pleuropneumoniae serovar 5b str. L20]
Length = 288
Score = 41.0 bits (94), Expect = 0.16, Method: Composition-based stats.
Identities = 33/288 (11%), Positives = 74/288 (25%), Gaps = 32/288 (11%)
Query: 4 ENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQ 63
GL S+++H L + + E +S++ + + +
Sbjct: 7 RIGLTGSILIHTAIFGGLASMVTHSHSDDLPQEETMSMELV--AALLEQPQVAVAQEEPA 64
Query: 64 FKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPY 123
+ V E + K E + + + +
Sbjct: 65 PPEPPEPEKVEVEPEPEPEAEAIPELKPQPKPKEKPKEKPKEKPKPKEPPKPKEKEKPKK 124
Query: 124 DKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQD------ 177
+K K E+ + K+I V + + + S +
Sbjct: 125 EKVKDKPIKALEKGPEAKQGIVAKAIPNAVQGTQLRAGIPNGKPEGNPNGLSANGSQNGA 184
Query: 178 ---------------AIAIVRNRVIANWNIPSDFKRF---KKLRVKMHFQLNQKGFVLGK 219
A ++ + N + K V + F ++ G ++
Sbjct: 185 VGGSGSGASGSEIGAYKAALQRALQRRANNAYPTREKMMRKTGVVTIGFTVSSSGELINV 244
Query: 220 INVDVVGGTELVRRMLRENARKAVIKSQAFRLSPSTYKSWRNITLFFV 267
++ G L A KA +S P+ + S + + F
Sbjct: 245 KVLNSSGNGN-----LDNAAVKA-AQSTKVSPPPAGFPSNVTVPVKFS 286
>gi|330880023|gb|EGH14172.1| TonB domain-containing protein [Pseudomonas syringae pv. glycinea
str. race 4]
Length = 299
Score = 41.0 bits (94), Expect = 0.16, Method: Composition-based stats.
Identities = 13/112 (11%), Positives = 37/112 (33%)
Query: 8 AISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGS 67
I++ +H L + Q L PI+R +++ + + P V+ +
Sbjct: 76 VIALAVHAAGFLWFRNSAPAQPLPPITRPMPIAMQMVARPTPPAPATPAAAAPAVEQPTA 135
Query: 68 SQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMP 119
+ + + + + + + K ++ + A K++
Sbjct: 136 PPPVIPAEPAKPLAAAPKPETPRPQPAKPQAKPQQKAQQQVAEKQAPAAAPQ 187
>gi|229514326|ref|ZP_04403787.1| ferric siderophore transport system binding protein TonB [Vibrio
cholerae TMA 21]
gi|229348306|gb|EEO13264.1| ferric siderophore transport system binding protein TonB [Vibrio
cholerae TMA 21]
Length = 244
Score = 41.0 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 23/237 (9%), Positives = 66/237 (27%), Gaps = 31/237 (13%)
Query: 9 ISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSS 68
+S+ H + L + V + + + +S++ + + + +
Sbjct: 12 LSLAFHALLL-ITTDEAQVFAMPAGNPTQSVSINMVS---------------MPKVAPAQ 55
Query: 69 QENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKI 128
E + S E+ Q + K Q +K++ S +
Sbjct: 56 PEQTQTEQSKPESVKPTPVQEVVKTPPVKPKVEPHKPKPQTVKKTVPAEQVSSKSVAKPQ 115
Query: 129 SKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIA 188
+ + + + + + A+V +V
Sbjct: 116 PEKVERTAETAQKPAPTPNQQPSQPTAASQGITSQPILVDKP---------ALVSAQVQP 166
Query: 189 NWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIK 245
+ + + + V L+ +G + + + G L ++A +A+ +
Sbjct: 167 RYPRIARKRGIEG-TVMYEIWLDAQGNQIKQQLLSSSGT-----EALDQSALEAIKQ 217
>gi|144897878|emb|CAM74742.1| hypothetical protein MGR_0039 [Magnetospirillum gryphiswaldense
MSR-1]
Length = 242
Score = 41.0 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 21/187 (11%), Positives = 52/187 (27%), Gaps = 23/187 (12%)
Query: 80 ENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQ 139
+++ G + P+ + +++ + + Q
Sbjct: 48 PESAPEPQAVTVDLVPPPPPPAAAKDGGAPAAKPGTEGKPIPQLAEGDLAEKSTPVSESQ 107
Query: 140 GISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRF 199
A+ + V KK +Q+ V +RV+ +W P+ +
Sbjct: 108 SPKPAQPDPVAAVPAPKQKKP-----------APVNQNERDWVLSRVLRHWRPPAGLSAY 156
Query: 200 KKLRVKMHFQLNQKGFVLG----------KINVDVVG--GTELVRRMLRENARKAVIKSQ 247
K + + ++ G D ++R + + A+ K+Q
Sbjct: 157 DKADISLRVKVLADGHFSDIYDSRRRWNPVEVFDGYQTLPANAIQRRIIDAIYTAIRKAQ 216
Query: 248 AFRLSPS 254
L +
Sbjct: 217 PLPLPEA 223
>gi|10048483|ref|NP_064483.1| protein piccolo isoform 1 [Rattus norvegicus]
gi|24212076|sp|Q9JKS6|PCLO_RAT RecName: Full=Protein piccolo; AltName: Full=Aczonin; AltName:
Full=Multidomain presynaptic cytomatrix protein
gi|7528227|gb|AAF63196.1| multidomain presynaptic cytomatrix protein Piccolo [Rattus
norvegicus]
Length = 5085
Score = 41.0 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 12/150 (8%), Positives = 34/150 (22%), Gaps = 6/150 (4%)
Query: 29 LLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQ 88
P+ +E S++ ++ S+ + + + E S
Sbjct: 1118 AEKPVPEKETASIE------KTPPMVTTDQKLEESEGKKSKVSALPEKKPSEEEKAISAD 1171
Query: 89 TKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKS 148
K E K K + + + ++ + + K +
Sbjct: 1172 KKERKPPAEEKPPLEEKKPIPVDKKLPPEAKPLSSEGEEKHEILKAHVQIPEEEPTGKVA 1231
Query: 149 IDTVVVRPDKKELLSKVEKSSRKRIPSQDA 178
+ ++ +P
Sbjct: 1232 AKAGEEEQQPDSRPEALPGATPLTLPKAGE 1261
>gi|310819956|ref|YP_003952314.1| hypothetical protein STAUR_2684 [Stigmatella aurantiaca DW4/3-1]
gi|309393028|gb|ADO70487.1| conserved uncharacterized protein [Stigmatella aurantiaca DW4/3-1]
Length = 450
Score = 41.0 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 31/285 (10%), Positives = 68/285 (23%), Gaps = 42/285 (14%)
Query: 7 LAISMILHVMFLLLLYFNFNVQLLV---PISRREMLSVDNIYNEDYHSSKYKKIEEPVVQ 63
LA S++LH+ + L + + + I + + +P +
Sbjct: 156 LATSLLLHLAWGLFIVSAAPPPEPELSLDELEDRFVRAEIIPQKLLREEPVAEKPQPSSE 215
Query: 64 FKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP- 122
K + + R ++Q + A + S +
Sbjct: 216 DKPEKPTDKKDPEEAKPTTPRPTNQAEQRAELVKKVSSKGLLKILGASGDGSGGGAFADI 275
Query: 123 ----------------------YDKQKISKATNKEQDLQGISFAEK-----------KSI 149
+ ++ + ++ + +
Sbjct: 276 LGSGTGGNEIAEALAGAGGVGVATTESVAAGGPRGGGTGSVASIGEVGTRGGGNVDLGAK 335
Query: 150 DTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQ 209
V V KE +V+ R I + + K +V + F
Sbjct: 336 KEVAVVGRVKEAAPEVDSGDVDREALSRYIRARLKAIQGCYEKELKRNPSLKGKVVVRFT 395
Query: 210 LNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPS 254
+ G + G E + + VI+S F P
Sbjct: 396 IKPSGRTSDIDIEENTLGNE-----AVGSCIRTVIRSWVFPFKPE 435
>gi|331018572|gb|EGH98628.1| tonB protein [Pseudomonas syringae pv. lachrymans str. M302278PT]
Length = 248
Score = 41.0 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 16/154 (10%), Positives = 39/154 (25%), Gaps = 6/154 (3%)
Query: 102 SSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKEL 161
+ ++ Q E + + + +P+K
Sbjct: 79 PEVAQAPKPEIVVPKKVEKPKPKPQPPKPQKKPEPPQEKPADEKPVDTPPSTAKPEKTAA 138
Query: 162 LSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKI 220
+ S + + + P D +R + ++ F ++ G VL
Sbjct: 139 PAPAPTPSPPSTALPSWQGDLLSHLGKYKKYPEDARRRGMQGVARLRFVVDADGNVLSYS 198
Query: 221 NVDVVGGTELVRRMLRENARKAVIKSQAFRLSPS 254
+ G L + + ++Q P
Sbjct: 199 IANSSGS-----PALDRATMEMIRRAQPLPKPPK 227
>gi|28867307|ref|NP_789926.1| tonB protein [Pseudomonas syringae pv. tomato str. DC3000]
gi|301382591|ref|ZP_07231009.1| tonB protein [Pseudomonas syringae pv. tomato Max13]
gi|302059233|ref|ZP_07250774.1| tonB protein [Pseudomonas syringae pv. tomato K40]
gi|302133610|ref|ZP_07259600.1| tonB protein [Pseudomonas syringae pv. tomato NCPPB 1108]
gi|28850541|gb|AAO53621.1| tonB protein [Pseudomonas syringae pv. tomato str. DC3000]
Length = 248
Score = 41.0 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 16/154 (10%), Positives = 39/154 (25%), Gaps = 6/154 (3%)
Query: 102 SSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKEL 161
+ ++ Q E + + + +P+K
Sbjct: 79 PEVAQAPKPEIVVPKKVEKPKPKPQPPKPQKKPEPPQEKPADEKPVDTPPSTAKPEKSAA 138
Query: 162 LSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKI 220
+ S + + + P D +R + ++ F ++ G VL
Sbjct: 139 PAPAPTPSPPSTALPSWQGDLLSHLGKYKKYPEDARRRGMQGVARLRFVVDADGNVLSYS 198
Query: 221 NVDVVGGTELVRRMLRENARKAVIKSQAFRLSPS 254
+ G L + + ++Q P
Sbjct: 199 IANSSGS-----PALDRATMEMIRRAQPLPKPPK 227
>gi|332525520|ref|ZP_08401677.1| TonB-like protein [Rubrivivax benzoatilyticus JA2]
gi|332109087|gb|EGJ10010.1| TonB-like protein [Rubrivivax benzoatilyticus JA2]
Length = 286
Score = 41.0 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 24/241 (9%), Positives = 60/241 (24%), Gaps = 20/241 (8%)
Query: 23 FNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENG 82
+ P + L + EP + + + ++
Sbjct: 34 VAVDWHSAEPETVSAELWAAVPEFAAPPPAPEPPPPEPEPKPAPEPKPTPPQAAPDRDAE 93
Query: 83 DRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGIS 142
+ E KR + K K + D++ ++A K++ Q
Sbjct: 94 IATERAERRKKEEEREKREFAEKQAAEKKAAEKKAREKEEADRKAKAEADEKKKAEQQKL 153
Query: 143 FAEKKSIDTVVVRPDK-------------KELLSKVEKSSRKRIPSQDAIAIVRNRVIAN 189
A+K + + + ++R PS +R +
Sbjct: 154 AAQKAEAQRLAKLREDQLKRMQNSLGGTGSGSPTSTGTAARDAGPSASYGGKLRRLIKDA 213
Query: 190 WNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAF 249
+V++ + G ++ + + G E +A+ +
Sbjct: 214 TVFTESVSG--NPQVEIEVRAGPTGTIIARRILKTSG-----VPSWDEAVIRAIDRIGTL 266
Query: 250 R 250
Sbjct: 267 P 267
>gi|289827214|ref|ZP_06545934.1| cell envelope integrity inner membrane protein TolA [Salmonella
enterica subsp. enterica serovar Typhi str. E98-3139]
Length = 177
Score = 41.0 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 19/132 (14%), Positives = 36/132 (27%), Gaps = 13/132 (9%)
Query: 137 DLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDF 196
DL A K K+ + ++ + + D
Sbjct: 55 DLSSGKNAPKTGGGAKGNGQPSKDSGTSGANGGTTGADISAYAKQIQVAIQ---SRLYDA 111
Query: 197 KRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPST- 255
++ + +H L G + +E L + A A K+ PS
Sbjct: 112 SLYQGKQCVLHISLAPDGSLKSIT-------SEGGDPALCQAALMA-TKTAKIPKPPSQA 163
Query: 256 -YKSWRNITLFF 266
Y+ ++ L F
Sbjct: 164 VYEKIKDAKLDF 175
>gi|213427710|ref|ZP_03360460.1| cell envelope integrity inner membrane protein TolA [Salmonella
enterica subsp. enterica serovar Typhi str. E02-1180]
Length = 154
Score = 41.0 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 19/132 (14%), Positives = 36/132 (27%), Gaps = 13/132 (9%)
Query: 137 DLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDF 196
DL A K K+ + ++ + + D
Sbjct: 32 DLSSGKNAPKTGGGAKGNGQPSKDSGTSGANGGTTGADISAYAKQIQVAIQ---SRLYDA 88
Query: 197 KRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPST- 255
++ + +H L G + +E L + A A K+ PS
Sbjct: 89 SLYQGKQCVLHISLAPDGSLKSIT-------SEGGDPALCQAALMA-TKTAKIPKPPSQA 140
Query: 256 -YKSWRNITLFF 266
Y+ ++ L F
Sbjct: 141 VYEKIKDAKLDF 152
>gi|167379495|ref|XP_001735160.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165902953|gb|EDR28640.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
Length = 495
Score = 41.0 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 19/155 (12%), Positives = 46/155 (29%), Gaps = 10/155 (6%)
Query: 9 ISMILHVMFLLLLYFNFNVQLLV-------PISRREMLSVDNIYNEDYHSSKYKKIEEPV 61
IS ++ + YFN + I E L+++ E+ + K+
Sbjct: 150 ISFMVTFFIIGYDYFNLTTRERENKGKTDSQIKEPEELAIEM---EETQPVEKKEEACKE 206
Query: 62 VQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVS 121
++FK ++ + + D E TK +++ ++ +
Sbjct: 207 IEFKQPTKSEEIIKDIETPKTSKGEDTNIHKEDETLTKEENTNIPKEESIKIDKTLSKEE 266
Query: 122 PYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRP 156
K K+ + + + K +
Sbjct: 267 DIKTDKTVSNNKKDISGESLKINKMKIEIDKFKKK 301
>gi|116331754|ref|YP_801472.1| hypothetical protein LBJ_2233 [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
gi|116125443|gb|ABJ76714.1| Hypothetical protein LBJ_2233 [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
Length = 560
Score = 41.0 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 15/163 (9%), Positives = 42/163 (25%), Gaps = 6/163 (3%)
Query: 92 HATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDT 151
T + S+ ++ L + + N + +K+
Sbjct: 361 PVTLQRKNKQKESERQRTHFTPENLEFYFIDPNLPSEVEGLNGGVVSGTETPTQKEGEKI 420
Query: 152 VVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVI-ANWNIPSDFKRFKKLRVKMHFQL 210
+P ++ + K R + + ++ + + + + + +
Sbjct: 421 PEDKPAEEGRVKGEVKQVRGKKLPSTYSNYISAKMRGPESFMEYWRRAPRNYSSVVAYTV 480
Query: 211 NQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSP 253
G V+ V+ G E + L + P
Sbjct: 481 TPDGEVVDVDLVEASGYPEQDQMTLE-----LIESLSPLMPPP 518
>gi|149065844|gb|EDM15717.1| E1A binding protein p300, isoform CRA_a [Rattus norvegicus]
Length = 2337
Score = 41.0 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 24/167 (14%), Positives = 43/167 (25%), Gaps = 3/167 (1%)
Query: 28 QLLVPISRREM-LSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFS 86
P +M + +D E + E K E R ++
Sbjct: 928 PEKQPSQEVKMEVKMDVDQPEPADAQPDDTKEAKAEDGKVEPTETEERGPELKTEVKEEE 987
Query: 87 DQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEK 146
DQ T A ++ S K +E MP ++ ++ Q +
Sbjct: 988 DQPSTSAAQSSPAPGQSKKKIFKPEELRQALMPTLEALYRQDPESLPFRQPVDPQLLGIP 1047
Query: 147 KSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIP 193
D V D + K++ + I + W
Sbjct: 1048 DYFDIVKSPMDLSTIKRKLDTGQYQEPW--QYIDDIWLMFNNAWLYN 1092
>gi|75675461|ref|YP_317882.1| TonB protein [Nitrobacter winogradskyi Nb-255]
gi|75676492|ref|YP_318913.1| TonB like protein [Nitrobacter winogradskyi Nb-255]
gi|74420331|gb|ABA04530.1| outer membrane transport energization protein TonB [Nitrobacter
winogradskyi Nb-255]
gi|74421362|gb|ABA05561.1| outer membrane transport energization protein TonB [Nitrobacter
winogradskyi Nb-255]
Length = 263
Score = 41.0 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 24/234 (10%), Positives = 65/234 (27%), Gaps = 23/234 (9%)
Query: 13 LHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENL 72
+H+ + L + + + + + + + L
Sbjct: 24 IHLGCVALALAHLDTDEAAEDLGAPAIEIGLDLSSPHREVTDLPPGPDT--DASMASPAL 81
Query: 73 VRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKAT 132
+V+E D D A + + S+ P+D A
Sbjct: 82 AEQKAVEEETDLPKDTPTESADPDRIVTENESRK---------------PFDDATEKAAK 126
Query: 133 NKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNI 192
+ + + + ++ + + + R + + +
Sbjct: 127 QTQASQESAAAEATAMPSVEQAQESERSVAPQQGTGASARRIRATWQKELVAHLDKHKRY 186
Query: 193 PSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKS 246
P D + K + ++F+L++ G V+ V+ G + + A + +S
Sbjct: 187 PPD-RSQKNAEILVNFELDRMGHVVSATIVNGSGD-----PIFDQAALAMLRRS 234
>gi|295110777|emb|CBL24730.1| Cell wall-associated hydrolases (invasion-associated proteins)
[Ruminococcus obeum A2-162]
Length = 803
Score = 41.0 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 18/198 (9%), Positives = 52/198 (26%), Gaps = 15/198 (7%)
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
+ G ++ R +E+ +Q +E + K + +A +
Sbjct: 104 KAGGEKSPSVSRSRLRKESIRGHPEQKFERDSEITESDKQNQKKKMVTAYAAKEQKRYHE 163
Query: 123 YDKQKISKATN-KEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAI 181
+ + K + Q +K K + S+
Sbjct: 164 KSMEDFREEIKGKTKREQIRKEQKKSKSRLSFEDESKGVIPGSGMAKRGASAVSETVSDY 223
Query: 182 VRNRVIANWNIPSDFKRFKKLR----------VKMHFQLNQKG----FVLGKINVDVVGG 227
+ +V + + + ++ + + +L + + + +
Sbjct: 224 GQKKVREDTDDNAALDAADQMEFAGESLARKSIYVRERLKENRQRNNRLKESVLEETEKS 283
Query: 228 TELVRRMLRENARKAVIK 245
+ A++AV K
Sbjct: 284 RLQFGTSASDEAKRAVQK 301
>gi|260556543|ref|ZP_05828761.1| TolA [Acinetobacter baumannii ATCC 19606]
gi|260409802|gb|EEX03102.1| TolA [Acinetobacter baumannii ATCC 19606]
Length = 467
Score = 41.0 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 25/209 (11%), Positives = 61/209 (29%), Gaps = 8/209 (3%)
Query: 46 NEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSK 105
N + K ++ + Q+ + + + A + K + +K
Sbjct: 250 NAKRKAEADAKAKQQKAAEDAKRKAEADAKAKQQKAAEDAKRKAEADAKAKQQKAAEDAK 309
Query: 106 GEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKV 165
+ A + ++ + A K+Q + + + KK
Sbjct: 310 RKAEADAKAKQQKAAEDAKRKAEADAKAKQQKAAEDARRKAEIEAEEKAASAKKAQEEAA 369
Query: 166 EKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVV 225
+K + + A ++ W++P+ V + F L+ G V +
Sbjct: 370 QKKGEAKKIASSAKRDFEQKIRRAWDVPTGSSGK---TVSVRFTLSDSGSVSSIVITRSS 426
Query: 226 GGTELVRRMLRENARKAVIKSQAFRLSPS 254
G L + + A+ S + +
Sbjct: 427 GDD-----ALDASIKAAIQASAPYPMPSD 450
>gi|239501027|ref|ZP_04660337.1| tolerance to group A colicins single-stranded filamentous DNA phage
[Acinetobacter baumannii AB900]
Length = 467
Score = 41.0 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 25/209 (11%), Positives = 61/209 (29%), Gaps = 8/209 (3%)
Query: 46 NEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSK 105
N + K ++ + Q+ + + + A + K + +K
Sbjct: 250 NAKRKAEADAKAKQQKAAEDAKRKAEADAKAKQQKAAEDAKRKAEADAKAKQQKAAEDAK 309
Query: 106 GEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKV 165
+ A + ++ + A K+Q + + + KK
Sbjct: 310 RKAEADAKAKQQKAAEDAKRKAEADAKAKQQKAAEDARRKAEIEAEEKAASAKKAQEEAA 369
Query: 166 EKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVV 225
+K + + A ++ W++P+ V + F L+ G V +
Sbjct: 370 QKKGEAKKIASSAKRDFEQKIRRAWDVPTGSSGK---TVSVRFTLSDSGSVSSIVITRSS 426
Query: 226 GGTELVRRMLRENARKAVIKSQAFRLSPS 254
G L + + A+ S + +
Sbjct: 427 GDD-----ALDASIKAAIQASAPYPMPSD 450
>gi|323496599|ref|ZP_08101652.1| TolA protein [Vibrio sinaloensis DSM 21326]
gi|323318345|gb|EGA71303.1| TolA protein [Vibrio sinaloensis DSM 21326]
Length = 357
Score = 41.0 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 19/166 (11%), Positives = 54/166 (32%), Gaps = 2/166 (1%)
Query: 4 ENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQ 63
+AIS LHV+ ++ L + + + P + + I + + +
Sbjct: 13 TKPIAISASLHVLLIVALIWGADFTMSDPKPAGQTVQAVVIDPAAVRAQAQQIRNQRQEA 72
Query: 64 FKGSSQ--ENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVS 121
K + L R+ E + ++ E + K + +++ + + +
Sbjct: 73 AKKEQDRLDKLRRESEQLEKSRKAEEERIRKLKEQQAKEAKAAREAEKRRIAKEKERKAE 132
Query: 122 PYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEK 167
Q+ + K + + K + + + ++ E+
Sbjct: 133 EQRAQQEKQRAAKLEAERKAKEQAVKKAEQERLAKEAAIAKAEQER 178
Score = 38.0 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 30/228 (13%), Positives = 78/228 (34%), Gaps = 9/228 (3%)
Query: 45 YNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSS 104
E ++K + + Q +++ + + ++ + A E E K
Sbjct: 137 QQEKQRAAKLEAERKAKEQAVKKAEQERLAKEAAIAKAEQERVAREKAAKEAEEKARKQR 196
Query: 105 KGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSK 164
+ + ++ + + + +K K + + L+ ++ +++ + + + +
Sbjct: 197 EAAEKAEKERIAKEKAAAEAAEKARKEKERLEKLERERKEQEAALNDIFAGLETESEQNS 256
Query: 165 VEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDV 224
+S + AI + N I F+ +++ +L G V
Sbjct: 257 SARSQFLNSEADRYGAIYVQLIQQNLLIEDSFRGK---SCRVNLRLIPTG---AGAIVGN 310
Query: 225 VGGTELVRRMLRENARKAVIKSQAFRLSPSTY--KSWRNITLFFVPSK 270
+ + R+ A++AV + F L ++I L VP K
Sbjct: 311 LSILDGDSRLCA-AAKRAVAQVGTFPLPKDQDLVSKLKDINLTVVPQK 357
>gi|323143606|ref|ZP_08078283.1| protein TolA [Succinatimonas hippei YIT 12066]
gi|322416669|gb|EFY07326.1| protein TolA [Succinatimonas hippei YIT 12066]
Length = 324
Score = 41.0 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 23/166 (13%), Positives = 52/166 (31%), Gaps = 11/166 (6%)
Query: 104 SKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLS 163
K E+A K++ + + K + E + + + A+K + + +
Sbjct: 169 QKAEEARKKAEAEKKALEEKQKAEEEAKKKAEAEARRKAEAQKAADALENELFGTSDGIE 228
Query: 164 KVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVD 223
+ + + V+ + W I + V + Q+ G + G +
Sbjct: 229 GGQGLGGGSGIASQYGSKVQTLIEQQWRIDPSMQGK---TVVVTIQVGSDGVISG----E 281
Query: 224 VVGGTELVRRMLRENARKAVIKSQAFRLSPSTYKSWRNITLFFVPS 269
G + V ++A + + P K NI + P
Sbjct: 282 KCRGDKRV----CDSALNTLRLIGMLPMPPRECKDCNNIVITMTPK 323
>gi|297264432|ref|XP_002808058.1| PREDICTED: LOW QUALITY PROTEIN: titin-like [Macaca mulatta]
Length = 33365
Score = 41.0 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 15/123 (12%), Positives = 29/123 (23%), Gaps = 16/123 (13%)
Query: 27 VQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFS 86
V P ++ + + V + +E V V E
Sbjct: 10459 VPRKEPPAKVPEV----------------PKKIVVEEKVRVPEEPKVPPTKVPEAPKEVV 10502
Query: 87 DQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEK 146
+ K + K +A KE + K+ T + + +K
Sbjct: 10503 PEKKVPVAPPKKPEVPPVKVPEAPKEVVPEKKVPVAPPKKPEVPPTKVPEVPKAAVPEKK 10562
Query: 147 KSI 149
Sbjct: 10563 VPE 10565
Score = 39.1 bits (89), Expect = 0.74, Method: Composition-based stats.
Identities = 7/104 (6%), Positives = 29/104 (27%), Gaps = 2/104 (1%)
Query: 50 HSSKYKKIEEPVVQFKGSSQENLV--RDFSVQENGDRFSDQTKTHATENETKRSSSSKGE 107
+ ++ + + + V V + E + +
Sbjct: 10259 APPRVPEVIKKALPEAPTPVPKKVEAPPAKVPKKIPEEKVPVPVQKKEAPPAKVPEVPKK 10318
Query: 108 QALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDT 151
K+ ++ V + +K ++ ++F +++ +
Sbjct: 10319 VPEKKVPEKKVLVHKKEAIPPAKGRTVLEEKVSVAFHQEEVVKE 10362
Score = 36.0 bits (81), Expect = 6.3, Method: Composition-based stats.
Identities = 14/162 (8%), Positives = 41/162 (25%), Gaps = 10/162 (6%)
Query: 29 LLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQEN---GDRF 85
P + E+ + + K + + L + +E
Sbjct: 9393 ESPPPAVPEI-------PKKKVPEERKPVPRKEEEVPPPKVPALPKKPVPEEKVAVPVPV 9445
Query: 86 SDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAE 145
+ + E K K A ++ + + ++S + +
Sbjct: 9446 AKKAPPPRAEVSKKTVVEEKRFVAEEKLSFAVPQRVEVTRHEVSAEEEWSYSEEEEGVSI 9505
Query: 146 KKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVI 187
+ ++ E+ + ++ + I+ RV
Sbjct: 9506 SVYREEEREEEEEAEVTEYEVMEEPEEYVVEEKLHIISKRVE 9547
>gi|116328845|ref|YP_798565.1| hypothetical protein LBL_2226 [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
gi|116121589|gb|ABJ79632.1| Hypothetical protein LBL_2226 [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
Length = 560
Score = 41.0 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 15/163 (9%), Positives = 42/163 (25%), Gaps = 6/163 (3%)
Query: 92 HATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDT 151
T + S+ ++ L + + N + +K+
Sbjct: 361 PVTLQRKNKQKESERQRTHFTPENLEFYFIDPNLPSEVEGLNGGVVSGTETPTQKEGEKI 420
Query: 152 VVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVI-ANWNIPSDFKRFKKLRVKMHFQL 210
+P ++ + K R + + ++ + + + + + +
Sbjct: 421 PEDKPAEEGRVKGEVKQVRGKKLPSTYSNYISAKMRGPESFMEYWRRAPRNYSSVVAYTV 480
Query: 211 NQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSP 253
G V+ V+ G E + L + P
Sbjct: 481 TPDGEVVDVDLVEASGYPEQDQMTLE-----LIESLSPLMPPP 518
>gi|57168647|ref|ZP_00367779.1| probable tonB transport protein Cj0181 [Campylobacter coli RM2228]
gi|57019928|gb|EAL56608.1| probable tonB transport protein Cj0181 [Campylobacter coli RM2228]
Length = 200
Score = 41.0 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 17/169 (10%), Positives = 53/169 (31%), Gaps = 6/169 (3%)
Query: 87 DQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEK 146
+ ++ ++ + + E+ S + K + ++++ S K
Sbjct: 11 KEVSIDQKKSNSQDKNKKQDEKMSLNSQDKNAVLKAQKKIEKQDENQAQKEIANASENSK 70
Query: 147 KSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDF-KRFKKLRVK 205
+T+ E ++ S + + A++ + P + + ++ V+
Sbjct: 71 FKNETLSAPLQSNEDKTQTIVSGNAKEQIKSYQALLMAHLAKFKKYPQEAIMQKQEGVVR 130
Query: 206 MHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPS 254
+ +++ G VL K +L + ++ P
Sbjct: 131 IRVSIDESGNVLSKELKKSCP-----YAVLNDEVLSLFKRASPLPKPPK 174
>gi|171915198|ref|ZP_02930668.1| 3-hydroxyisobutyrate dehydrogenase [Verrucomicrobium spinosum DSM
4136]
Length = 1014
Score = 41.0 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 12/150 (8%), Positives = 28/150 (18%)
Query: 26 NVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRF 85
+ P + E V+ E + P
Sbjct: 298 EAAAVPPPTPVEAAPVEPTPVEPTPAEPTPAEPTPAEPTPAEPTPAEPTPAEPTPAEPTP 357
Query: 86 SDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAE 145
++ T T E + + + + + K + + D E
Sbjct: 358 AEPTPAEPTPAEPTPAEPTPAAETPPLETEKKKAEADAVKTEEAGKVTPPADAAAEKPKE 417
Query: 146 KKSIDTVVVRPDKKELLSKVEKSSRKRIPS 175
+ + K +
Sbjct: 418 SPLKPLAPTSASADAPSLAKKDEAAKDKAA 447
>gi|317011540|gb|ADU85287.1| siderophore-mediated iron transport protein [Helicobacter pylori
SouthAfrica7]
Length = 278
Score = 41.0 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 27/252 (10%), Positives = 69/252 (27%), Gaps = 10/252 (3%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
IS L+ + YF + P+++ V +SK K E +
Sbjct: 18 SFLISFTLYAL--GFGYFLLHEDAPAPLAQAGTTKVTMSLASINTNSKTKTNAESAKPKE 75
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
+E + + + + K + + + ++ +
Sbjct: 76 EPKEEPKKEEPKKEVTKPKPKPKPKPKPKPKPKPKPEPKPEPKPEPKIEEVKKEEPKEEP 135
Query: 126 QKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRK--RIPSQDAIAIVR 183
+K ++ K + + + + ++ S + + ++
Sbjct: 136 KKEEAKEEAKEKSAPKQITTKDIVKEKDKQEESNKTSDGATSEAQAYNPGVSNEFLMKIQ 195
Query: 184 NRVIANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKA 242
+ + P + + V + F +N G V V +L A +A
Sbjct: 196 TAISSKNRYPKMAQIRGIEGEVLVSFVINPDGSVTDIKVVKSNTTD-----ILNHAALEA 250
Query: 243 VIKSQAFRLSPS 254
+ + P
Sbjct: 251 IKSAAHLFPKPE 262
>gi|258543664|ref|YP_003189097.1| TonB periplasmic protein [Acetobacter pasteurianus IFO 3283-01]
gi|256634742|dbj|BAI00718.1| TonB periplasmic protein [Acetobacter pasteurianus IFO 3283-01]
gi|256637798|dbj|BAI03767.1| TonB periplasmic protein [Acetobacter pasteurianus IFO 3283-03]
gi|256640852|dbj|BAI06814.1| TonB periplasmic protein [Acetobacter pasteurianus IFO 3283-07]
gi|256643907|dbj|BAI09862.1| TonB periplasmic protein [Acetobacter pasteurianus IFO 3283-22]
gi|256646962|dbj|BAI12910.1| TonB periplasmic protein [Acetobacter pasteurianus IFO 3283-26]
gi|256650015|dbj|BAI15956.1| TonB periplasmic protein [Acetobacter pasteurianus IFO 3283-32]
gi|256653005|dbj|BAI18939.1| TonB periplasmic protein [Acetobacter pasteurianus IFO 3283-01-42C]
gi|256656059|dbj|BAI21986.1| TonB periplasmic protein [Acetobacter pasteurianus IFO 3283-12]
Length = 335
Score = 41.0 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 24/233 (10%), Positives = 52/233 (22%), Gaps = 22/233 (9%)
Query: 42 DNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRS 101
+ + + + E V + + T A
Sbjct: 119 EKLPDVPLPPKAEEPSPEVVKTPPSPPSPVQPTNSVAPPSPITQPTDTLPDAAVPSHITQ 178
Query: 102 SSSKGEQALKE-SALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKE 160
+ + + S L + D+++ + + G +
Sbjct: 179 PNKAKKSQAESHSLLETLDTFRADQKQTHAPKARANPVAGGAPK---------------- 222
Query: 161 LLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGF---VL 217
S+ S + V + + K + + ++ G V
Sbjct: 223 GGGSPVGSNITGSLSAGQQKAIGAAVRRCYTEDTAAKDYASFVAHLVVTVDGTGEARIVQ 282
Query: 218 GKINVDVVGGTELVRRMLRENARKAVIK--SQAFRLSPSTYKSWRNITLFFVP 268
+ R L E AR AV+ + R + F P
Sbjct: 283 FAPETQARMNADSSYRALAERARAAVLSPTCAKLPIPKELLGQPRQLKFVFRP 335
>gi|152993757|ref|YP_001359478.1| periplasmic protein TonB [Sulfurovum sp. NBC37-1]
gi|151425618|dbj|BAF73121.1| periplasmic protein TonB [Sulfurovum sp. NBC37-1]
Length = 242
Score = 41.0 bits (94), Expect = 0.20, Method: Composition-based stats.
Identities = 37/194 (19%), Positives = 65/194 (33%), Gaps = 14/194 (7%)
Query: 78 VQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQD 137
V E + + E E + + E +KE ++ + K K+ ++
Sbjct: 51 VPEVVPETQEVEEESVVEEEPEPEPEPEPEPIVKEEPVVEKVIPEPVKPKVLPVPEVKKP 110
Query: 138 LQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRI-----PSQDAIAIVRNRVIANWNI 192
+KK + S+V R +A VR R+ N +
Sbjct: 111 KPKKKEIKKKKKVKKKKIRTRTAQSSRVGVKRRGSGHASASEKNRFLATVRQRINRNKSY 170
Query: 193 PSDFKRFK-KLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRL 251
P KR + VK+HF + G V + V G ++ +ARKAV K+
Sbjct: 171 PRIAKRRGMQGSVKVHFTILPNGHVGN---ILVSGP-----KVFHSSARKAVKKAFPIST 222
Query: 252 SPSTYKSWRNITLF 265
+ + + L
Sbjct: 223 KNVPFSLPKTVNLT 236
>gi|307251835|ref|ZP_07533736.1| Cell envelope integrity inner membrane protein TolA [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|306860527|gb|EFM92539.1| Cell envelope integrity inner membrane protein TolA [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
Length = 190
Score = 40.7 bits (93), Expect = 0.20, Method: Composition-based stats.
Identities = 11/117 (9%), Positives = 40/117 (34%), Gaps = 17/117 (14%)
Query: 157 DKKELLSKVEKSSRKRI-----PSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLN 211
+K S+ +++ +++ ++ + + F + ++ ++
Sbjct: 79 NKNTAGSQGSGNAKGIGDGRGTADTGYAQLIKKKLARTYRVDPSFSGRE---CQVKIFID 135
Query: 212 QKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSP--STYKSWRNITLFF 266
G + + G + + A A+ ++ +P TY +++ + F
Sbjct: 136 PAGNITNHQVL--SGPDD-----ICRAAVTAITSARNVPRAPNEETYNKYKSPIIKF 185
>gi|288800381|ref|ZP_06405839.1| membrane protein [Prevotella sp. oral taxon 299 str. F0039]
gi|288332594|gb|EFC71074.1| membrane protein [Prevotella sp. oral taxon 299 str. F0039]
Length = 488
Score = 40.7 bits (93), Expect = 0.20, Method: Composition-based stats.
Identities = 8/105 (7%), Positives = 34/105 (32%), Gaps = 4/105 (3%)
Query: 14 HVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLV 73
H++ ++L + + + V+ D + + + +++
Sbjct: 227 HLLLAIILPSAVMWSVSKWEYKVMVWPVEMQRKTDKQKKDKALKAKQIQKKLQEARKQKE 286
Query: 74 RDFSVQEN----GDRFSDQTKTHATENETKRSSSSKGEQALKESA 114
++ + + ++ + A + K + K +Q + +
Sbjct: 287 KEEVSTKELLSFNSQVQNKQDSVAKPVQNKTNGVKKKKQPKQGAP 331
>gi|330445540|ref|ZP_08309192.1| protein TolA [Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
gi|328489731|dbj|GAA03689.1| protein TolA [Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
Length = 362
Score = 40.7 bits (93), Expect = 0.20, Method: Composition-based stats.
Identities = 31/218 (14%), Positives = 70/218 (32%), Gaps = 12/218 (5%)
Query: 54 YKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKES 113
+ E+ + E + + ++ Q E + +K ++A +
Sbjct: 155 QEAAEKAEQVRQQKLAEQRKAEEASRKAEQERQKQIAAKKKAEEEAAKAEAKRKEAEAKR 214
Query: 114 ALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRI 173
+ K+ ++A K + + + ++ +++ + + + +
Sbjct: 215 LEAERKAAEAKKKAEAEAKRKAAEAKKLEQQKEAALNDMFAGLEAENEQRGGARGQHIAD 274
Query: 174 PSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRR 233
AI + + N + FK + + +L+ G VL G
Sbjct: 275 EVARYGAIYKQMIQQNLLVDQSFKGQE---CNLTMRLSADGLVLDVTQNGGDG------- 324
Query: 234 MLRENARKAVIKSQAFRLS--PSTYKSWRNITLFFVPS 269
L A+ AV+K F + P K R+I L P
Sbjct: 325 ALCRAAKSAVVKVSQFPMPDDPDVVKKLRDIKLAVTPQ 362
>gi|222875364|gb|EEF12495.1| predicted protein [Populus trichocarpa]
Length = 113
Score = 40.7 bits (93), Expect = 0.20, Method: Composition-based stats.
Identities = 12/80 (15%), Positives = 24/80 (30%), Gaps = 6/80 (7%)
Query: 168 SSRKRIPSQDAIAIVRNRVIANWNIPSDFK-RFKKLRVKMHFQLNQKGFVLGKINVDVVG 226
+ + +R + + P K K+ V + F + G + G
Sbjct: 16 TGNSTDEVAAYKSALRREIERHKRYPQRAKMMRKQGIVTVSFAIGTDGSLSQISIAKSSG 75
Query: 227 GTELVRRMLRENARKAVIKS 246
+ L + A AV +
Sbjct: 76 SED-----LDKAALSAVQSA 90
>gi|170698507|ref|ZP_02889578.1| TonB family protein [Burkholderia ambifaria IOP40-10]
gi|170136591|gb|EDT04848.1| TonB family protein [Burkholderia ambifaria IOP40-10]
Length = 141
Score = 40.7 bits (93), Expect = 0.20, Method: Composition-based stats.
Identities = 12/83 (14%), Positives = 25/83 (30%), Gaps = 11/83 (13%)
Query: 179 IAIVRNRVIANWNIPSDFKRFKKLR------VKMHFQLNQKGFVLGKINVDVVGGTELVR 232
+A R V + + + V + F +++ G ++ G +E
Sbjct: 28 LAQYRVEVARCVAEHNPSAVSRGPQAMLRSLVVVAFTVDRGGRLVNASVYRSNGDSEAEA 87
Query: 233 RMLRENARKAVIKSQAFRLSPST 255
L + +S PS
Sbjct: 88 LALAS-----LRRSAPLPAPPSK 105
>gi|258406046|ref|YP_003198788.1| hypothetical protein Dret_1926 [Desulfohalobium retbaense DSM 5692]
gi|257798273|gb|ACV69210.1| hypothetical protein Dret_1926 [Desulfohalobium retbaense DSM 5692]
Length = 469
Score = 40.7 bits (93), Expect = 0.20, Method: Composition-based stats.
Identities = 28/186 (15%), Positives = 62/186 (33%), Gaps = 9/186 (4%)
Query: 7 LAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKG 66
+ +S+ LH L +L F L S R +L +D + + + + + E+P
Sbjct: 6 IVLSLGLHAGLLTVLLFGVE--LTPQPSVRPLLEMDLV--DPVAAPQAARTEQPQPPEPS 61
Query: 67 SSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQ 126
++++ + + ++ +T S+ A K+ A S +
Sbjct: 62 AAEKAPPKPPPEPPDKPPPPEKPDLAPESPKTSPRSTPPPPPASKDIAAAEPAQSEPEPA 121
Query: 127 KISKATNKEQDLQGISFA-----EKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAI 181
A+ A + + D + + + L + K R + + I
Sbjct: 122 PPVSASPPADTAPLPKSATGVVVKNEHGDRLKHGAEARGLQALAAKEYRPKDYAGHYSTI 181
Query: 182 VRNRVI 187
+ RV
Sbjct: 182 GKRRVS 187
>gi|254581676|ref|XP_002496823.1| ZYRO0D08954p [Zygosaccharomyces rouxii]
gi|186703884|emb|CAQ43569.1| Uncharacterised protein KLLA0F06116g [Zygosaccharomyces rouxii]
gi|238939715|emb|CAR27890.1| ZYRO0D08954p [Zygosaccharomyces rouxii]
Length = 867
Score = 40.7 bits (93), Expect = 0.20, Method: Composition-based stats.
Identities = 17/174 (9%), Positives = 51/174 (29%), Gaps = 9/174 (5%)
Query: 24 NFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGD 83
+ + L VD E + ++ K +P+ S + + + + + +
Sbjct: 650 SLPSVKESVPTDFSHLPVDLPIPESFVEAEPKPESKPLPNPAEESLKGPISETVREPSTE 709
Query: 84 RFSDQTKTHATENETKRSSSSKGEQALKESALLRM---------PVSPYDKQKISKATNK 134
+D + + S A P+ ++ + T +
Sbjct: 710 SNADASVEPTKVSNASSVVESTKVSNASSVAEPTKESNASLAEEPIKEHNANASVEPTEE 769
Query: 135 EQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIA 188
+ EK + +V+ + + + E + + S + + ++
Sbjct: 770 SNASSVVEPTEKSNASSVMEPTKESNVDAAEEPTKQPVKSSVPSNDALIAKLNN 823
>gi|160707980|ref|NP_001104267.1| protein piccolo isoform 2 [Rattus norvegicus]
gi|7493836|gb|AAF07822.2|AF138789_1 multidomain presynaptic cytomatrix protein Piccolo [Rattus
norvegicus]
Length = 4880
Score = 40.7 bits (93), Expect = 0.21, Method: Composition-based stats.
Identities = 12/150 (8%), Positives = 34/150 (22%), Gaps = 6/150 (4%)
Query: 29 LLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQ 88
P+ +E S++ ++ S+ + + + E S
Sbjct: 1118 AEKPVPEKETASIE------KTPPMVTTDQKLEESEGKKSKVSALPEKKPSEEEKAISAD 1171
Query: 89 TKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKS 148
K E K K + + + ++ + + K +
Sbjct: 1172 KKERKPPAEEKPPLEEKKPIPVDKKLPPEAKPLSSEGEEKHEILKAHVQIPEEEPTGKVA 1231
Query: 149 IDTVVVRPDKKELLSKVEKSSRKRIPSQDA 178
+ ++ +P
Sbjct: 1232 AKAGEEEQQPDSRPEALPGATPLTLPKAGE 1261
>gi|29346223|ref|NP_809726.1| TonB [Bacteroides thetaiotaomicron VPI-5482]
gi|29338118|gb|AAO75920.1| TonB [Bacteroides thetaiotaomicron VPI-5482]
Length = 443
Score = 40.7 bits (93), Expect = 0.21, Method: Composition-based stats.
Identities = 21/139 (15%), Positives = 44/139 (31%), Gaps = 18/139 (12%)
Query: 123 YDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIV 182
K+ T K ++ + EK + V + + + S ++
Sbjct: 298 KKADKVQSDTEKADTIELTAEPEKTAEPQVDITITETKGDSIYSVVETMPDFPGGQKELL 357
Query: 183 RNRVIANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARK 241
+ + N P+ K + RV + F +N+ G + G V V L + A +
Sbjct: 358 -SFLSRNIKYPTKAIENKIQGRVIVQFVVNKDGSIFGAKVVRSVDPD------LDKEALR 410
Query: 242 AVIKSQAFRLSPSTYKSWR 260
+ + W+
Sbjct: 411 VIN-----SMP-----KWK 419
>gi|119775222|ref|YP_927962.1| hypothetical protein Sama_2087 [Shewanella amazonensis SB2B]
gi|119767722|gb|ABM00293.1| TolA [Shewanella amazonensis SB2B]
Length = 327
Score = 40.7 bits (93), Expect = 0.21, Method: Composition-based stats.
Identities = 17/153 (11%), Positives = 43/153 (28%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
L +AIS+ +H+ +L+L + E + + K E +
Sbjct: 10 LTLPVAISLAIHLGIILVLALGALDFFTKKLETPEPAAAAPVQAVLIDQQKVAAAAEKIK 69
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
Q K ++ E + + + + K ++ + A+
Sbjct: 70 QEKRDAERREQLRQEELERKADEARKAREQEQAKLKQLEIERKQKEIETQKAIDEAKRKE 129
Query: 123 YDKQKISKATNKEQDLQGISFAEKKSIDTVVVR 155
++ + KE+ + +
Sbjct: 130 EQAKQAADKAEKERVRKESERKAAEEAAKKAED 162
>gi|312172546|emb|CBX80802.1| Protein tonB [Erwinia amylovora ATCC BAA-2158]
Length = 241
Score = 40.7 bits (93), Expect = 0.21, Method: Composition-based stats.
Identities = 26/225 (11%), Positives = 59/225 (26%), Gaps = 19/225 (8%)
Query: 7 LAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKG 66
L S+ LH + + + Q + + +SV + E + +
Sbjct: 22 LLGSIALHGAVIGAMLYASFHQAVEMPKASQPISVSMVAPETQPKPQAAPRDVAPEPEAK 81
Query: 67 SSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQ 126
+ V+ + + K + E + +A L + K
Sbjct: 82 AE----PVSEPVKTEPVAIPQPEPKPKPKPKKKEVVKPEPEVKPRPAAPLETRPTEQAKP 137
Query: 127 KISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVR--- 183
+ + S S+ L + + + S + +R
Sbjct: 138 STAPKKSPTPSSALSSGPRALSVGKPSYPARAFALRIEGRVRVQFDVDSSGQVDNIRILS 197
Query: 184 -----------NRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVL 217
+ + W + K K L + + F+LN +
Sbjct: 198 AEPRNLFEREVKQAMRRWRYEAG-KPAKDLSMNIQFKLNGGSSIS 241
>gi|170739439|ref|YP_001768094.1| TonB family protein [Methylobacterium sp. 4-46]
gi|168193713|gb|ACA15660.1| TonB family protein [Methylobacterium sp. 4-46]
Length = 270
Score = 40.7 bits (93), Expect = 0.21, Method: Composition-based stats.
Identities = 17/163 (10%), Positives = 35/163 (21%), Gaps = 5/163 (3%)
Query: 68 SQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQK 127
+ D + + + + K E + K +
Sbjct: 65 APRREPSDLPPGPEAEEAAAAQAMVQQQATETPTELPKAVPTEAEDPDRIVSPDATRKPQ 124
Query: 128 ISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEK----SSRKRIPSQDAIAIVR 183
K K + + V +E R +
Sbjct: 125 EDKPEVKRTETSASQDSVASEAAAVPTSETMREAPRSTAPVLGTGESARRARVTWQKQLL 184
Query: 184 NRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVG 226
+ + PS + +V + F L++ G V G
Sbjct: 185 AHLDRHKRYPSGAAQATG-QVTVTFVLDRLGRVASASVSAGSG 226
>gi|153828015|ref|ZP_01980682.1| tonB1 protein [Vibrio cholerae 623-39]
gi|148876424|gb|EDL74559.1| tonB1 protein [Vibrio cholerae 623-39]
Length = 249
Score = 40.7 bits (93), Expect = 0.21, Method: Composition-based stats.
Identities = 23/237 (9%), Positives = 66/237 (27%), Gaps = 31/237 (13%)
Query: 9 ISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSS 68
+S+ H + L + V + + + +S++ + + + +
Sbjct: 17 LSLAFHALLL-ITTDEAQVFAMPAGNPTQSVSINMVS---------------MPKVAPAQ 60
Query: 69 QENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKI 128
E + S E+ Q + K Q +K++ S +
Sbjct: 61 PEQTQTEQSKPESVKPTPVQEVVKTPPVKPKVEPHKPKPQTVKKTVPAEQVSSKSVAKPQ 120
Query: 129 SKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIA 188
+ + + + + + A+V +V
Sbjct: 121 PEKVERTAETAQKPAPTPNQQPSQPTAASQGITSQPILVDKP---------ALVSAQVQP 171
Query: 189 NWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIK 245
+ + + + V L+ +G + + + G L ++A +A+ +
Sbjct: 172 RYPRIARKRGIEG-TVMYEIWLDAQGNQIKQQLLSSSGT-----EALDQSALEAIKQ 222
>gi|270295771|ref|ZP_06201971.1| conserved hypothetical protein [Bacteroides sp. D20]
gi|270273175|gb|EFA19037.1| conserved hypothetical protein [Bacteroides sp. D20]
Length = 606
Score = 40.7 bits (93), Expect = 0.21, Method: Composition-based stats.
Identities = 16/146 (10%), Positives = 39/146 (26%), Gaps = 7/146 (4%)
Query: 99 KRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDK 158
S+ + K+ A + ++ + Q K V
Sbjct: 283 IISNIEAVARTTKKIAAEVIEAVDPKTEQPAPEVQDPQAAPQPEQDTKAVTYKGKVVDKD 342
Query: 159 KELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDF-KRFKKLRVKMHFQLNQKGFVL 217
E + ++ + + N P K+ + RV + F + + G +
Sbjct: 343 TLDNPIFEVVEHMPEFTGGGMSALMEYLSKNIKYPEAAMKKGTQGRVTVQFVVEKDGSIT 402
Query: 218 GKINVDVVGGTELVRRMLRENARKAV 243
+ + L + A + +
Sbjct: 403 NVKILRGIDPE------LDKEAIRVI 422
>gi|254506109|ref|ZP_05118253.1| protein TolA [Vibrio parahaemolyticus 16]
gi|219550927|gb|EED27908.1| protein TolA [Vibrio parahaemolyticus 16]
Length = 355
Score = 40.7 bits (93), Expect = 0.21, Method: Composition-based stats.
Identities = 18/163 (11%), Positives = 53/163 (32%), Gaps = 2/163 (1%)
Query: 7 LAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKG 66
LAIS LH + ++ L + + + P +++ I + + K
Sbjct: 16 LAISASLHALLVVALIWGADFTMSKPEPTGQLVQAVVIDPARVREQAQQIRNQRQEAAKK 75
Query: 67 SSQ--ENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYD 124
+ L R+ E + ++ E + K + +++ + + +
Sbjct: 76 EQDRLDKLRRESEQLEKNRKAEEERIRKLKEQQAKEAKAAREAEKRRIAKEKERKEEELR 135
Query: 125 KQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEK 167
++ + K + + K + + + ++ E+
Sbjct: 136 AKQEKERVAKLEAERKAKEQAIKKAEQERLAKEAAIAKAEQER 178
>gi|91203873|emb|CAJ71526.1| unknown protein [Candidatus Kuenenia stuttgartiensis]
Length = 482
Score = 40.7 bits (93), Expect = 0.21, Method: Composition-based stats.
Identities = 23/203 (11%), Positives = 45/203 (22%), Gaps = 11/203 (5%)
Query: 58 EEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLR 117
EE S E QE + + ++ R
Sbjct: 269 EETRNIKNASKVEKGELLPEPQELQGIRKSEITKETGKERKDHVTTPPAGTYGVTQQNKR 328
Query: 118 MPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQD 177
K K K + + + + K+
Sbjct: 329 ETTGESQKVVAEKEQPKASFNVAAKDEGSGNDPVLFEDTLSNAEIPGAPSFNVKQHKYAA 388
Query: 178 AIAIVRNRVIANWNIPSDFKRFKKLR------VKMHFQLNQKGFVLGKINVDVVGGTELV 231
+R R+ W + + L + + F++ G + G V+ G
Sbjct: 389 YFKHIRQRISLYWFLGYGTRAEINLVTNKDKPIIIEFKVLPNGAIEGVKIVEDAGN---- 444
Query: 232 RRMLRENARKAVIKSQAFRLSPS 254
L ++ + PS
Sbjct: 445 -FQLASRIVSSIKSASPLDPFPS 466
Score = 36.8 bits (83), Expect = 3.5, Method: Composition-based stats.
Identities = 16/189 (8%), Positives = 54/189 (28%), Gaps = 7/189 (3%)
Query: 7 LAISMILHVMFLLLL-----YFNFNVQLLVPISRREMLSV--DNIYNEDYHSSKYKKIEE 59
+ +S+ +H +F + + + ++ D +D ++ +
Sbjct: 19 IIVSVAIHGLFFFFSPQGNQLLSIRSLRDSFVREPDEFTITFDLESKDDKKELTASEVSK 78
Query: 60 PVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMP 119
+ ++ D S + + S +T + + + + L
Sbjct: 79 EKSLLEKEKKDKTFTDTSQNKEEEEPSAETDRIGEKGASAKGKNPDDTSVLNNEPYAGGQ 138
Query: 120 VSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAI 179
K + + E Q + + + R + + ++ + P ++ I
Sbjct: 139 SKVPLLGKGEQGISIEDQRQNQAQKTVEKPGSKEERVAENNAARESRQTEKNPAPQKEQI 198
Query: 180 AIVRNRVIA 188
+ +
Sbjct: 199 DSIGMQQER 207
>gi|90580126|ref|ZP_01235934.1| hypothetical tolA protein [Vibrio angustum S14]
gi|90439011|gb|EAS64194.1| hypothetical tolA protein [Vibrio angustum S14]
Length = 387
Score = 40.7 bits (93), Expect = 0.21, Method: Composition-based stats.
Identities = 13/175 (7%), Positives = 55/175 (31%), Gaps = 3/175 (1%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPI---SRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
IS+ +H + + LL + + + + + VD + ++ E
Sbjct: 9 STVISLFIHALLIGLLLWGADFTKKKSDVGGNTIQAVVVDPAMIHQQATQIKEQREAAKR 68
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
+ ++ + ++++ +++ + + + + E+ K A + +
Sbjct: 69 AEQERQKKQEEQAEALEKQRKDEAERARQLKADQLKAEKEAREAEKQRKLVAEQQKQAAE 128
Query: 123 YDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQD 177
++ A + K + ++ + ++ + + +
Sbjct: 129 EKRKADEAAKEAKAQAAKAEAERKAKQEAAEKAEQVRQQKLEEQRKAEEASRQAE 183
Score = 36.0 bits (81), Expect = 5.4, Method: Composition-based stats.
Identities = 33/218 (15%), Positives = 68/218 (31%), Gaps = 12/218 (5%)
Query: 54 YKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKES 113
+ E Q + V+ + + A E + ++ E KE+
Sbjct: 180 RQAELERQKQEAAKKKAQEEAAAEVKRKEAEAKKKAEAEAKRKEAEAKKKAEAEAKRKEA 239
Query: 114 ALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRI 173
+ + ++ E + + + ++ +++ + + + K
Sbjct: 240 EAKKKVEAEAKRKAAEAKKKAEAEAKKLQQQKEAALNDMFAGLEAESEQRGGAKGKHIAD 299
Query: 174 PSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRR 233
AI + + N + FK + + +L+ G VL + G
Sbjct: 300 EVARYGAIYKQMIQQNLLVDQSFKGQE---CNLSMRLSADGLVLDVTQSNGDG------- 349
Query: 234 MLRENARKAVIKSQAFRLS--PSTYKSWRNITLFFVPS 269
L A+ AV+K F + P K RNI L P
Sbjct: 350 ALCRAAKSAVVKVSQFPMPDDPEIAKKLRNIKLTVTPQ 387
>gi|313202422|ref|YP_004041080.1| hypothetical protein MPQ_2704 [Methylovorus sp. MP688]
gi|312441738|gb|ADQ85844.1| conserved hypothetical protein [Methylovorus sp. MP688]
Length = 308
Score = 40.7 bits (93), Expect = 0.21, Method: Composition-based stats.
Identities = 21/229 (9%), Positives = 56/229 (24%), Gaps = 17/229 (7%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
+ IS+++H + L + + P + S + + K + +P Q +
Sbjct: 42 AIVISLLIHAILLFTVII--HPLDSGPEAEPAESSQIVMQLGPKAAPKAAETPQPSTQAE 99
Query: 66 GSSQE----------NLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESAL 115
V S + + Q + +
Sbjct: 100 PEPAPAPKAPPKAVSKPVSKPSKPTSPPVMAAQPPARNQAPTPLDRRVPPQPAPEPDMSP 159
Query: 116 LRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPS 175
+ Y KQ+ + + A K + + ++++
Sbjct: 160 PPTDMMSYVKQQQDRRRAQGDPSILNEDAAAKDRGPTADEIREANIQRNLKEAGGGVFQI 219
Query: 176 QDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDV 224
+ V W S+ + + + G + + +
Sbjct: 220 TQMSSRGAKFVFRGWRYFSNPRTE-----YIEVEAPPDGDIRRAVVKRM 263
>gi|323226786|gb|EGA10977.1| cell envelope integrity inner membrane protein TolA [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB110209-0055]
Length = 246
Score = 40.7 bits (93), Expect = 0.22, Method: Composition-based stats.
Identities = 18/132 (13%), Positives = 36/132 (27%), Gaps = 13/132 (9%)
Query: 137 DLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDF 196
DL A K K+ + ++ + + D
Sbjct: 124 DLSSGKNAPKTGGGAKGNGQPSKDSGTSGANGGATGADISAYAKQIQVAIQ---SRLYDA 180
Query: 197 KRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPST- 255
++ + +H L G + + GG + + A+ A PS
Sbjct: 181 SLYQGKQCVLHISLAPDGSLKS---ITSEGGDPALCQAALMAAKTA-----KIPKPPSQA 232
Query: 256 -YKSWRNITLFF 266
Y+ ++ L F
Sbjct: 233 VYEKIKDAKLDF 244
>gi|323191721|gb|EFZ76974.1| cell envelope integrity inner membrane protein TolA [Salmonella
enterica subsp. enterica serovar Montevideo str.
609458-1]
Length = 197
Score = 40.7 bits (93), Expect = 0.22, Method: Composition-based stats.
Identities = 18/132 (13%), Positives = 36/132 (27%), Gaps = 13/132 (9%)
Query: 137 DLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDF 196
DL A K K+ + ++ + + D
Sbjct: 75 DLSSGKNAPKTGGGAKGNGQPSKDSGTSGANGGATGADISAYAKQIQVAIQ---SRLYDA 131
Query: 197 KRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPST- 255
++ + +H L G + + GG + + A+ A PS
Sbjct: 132 SLYQGKQCVLHISLAPDGSLKS---ITSEGGDPALCQAALMAAKTA-----KIPKPPSQA 183
Query: 256 -YKSWRNITLFF 266
Y+ ++ L F
Sbjct: 184 VYEKIKDAKLDF 195
>gi|322651358|gb|EFY47740.1| cell envelope integrity inner membrane protein TolA [Salmonella
enterica subsp. enterica serovar Montevideo str.
OH_2009072675]
Length = 148
Score = 40.7 bits (93), Expect = 0.22, Method: Composition-based stats.
Identities = 18/132 (13%), Positives = 36/132 (27%), Gaps = 13/132 (9%)
Query: 137 DLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDF 196
DL A K K+ + ++ + + D
Sbjct: 26 DLSSGKNAPKTGGGAKGNGQPSKDSGTSGANGGATGADISAYAKQIQVAIQ---SRLYDA 82
Query: 197 KRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPST- 255
++ + +H L G + + GG + + A+ A PS
Sbjct: 83 SLYQGKQCVLHISLAPDGSLKS---ITSEGGDPALCQAALMAAKTA-----KIPKPPSQA 134
Query: 256 -YKSWRNITLFF 266
Y+ ++ L F
Sbjct: 135 VYEKIKDAKLDF 146
>gi|153824734|ref|ZP_01977401.1| protein TonB [Vibrio cholerae MZO-2]
gi|149741690|gb|EDM55719.1| protein TonB [Vibrio cholerae MZO-2]
Length = 244
Score = 40.7 bits (93), Expect = 0.22, Method: Composition-based stats.
Identities = 15/182 (8%), Positives = 42/182 (23%), Gaps = 2/182 (1%)
Query: 9 ISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNED-YHSSKYKKIEEPVVQFKGS 67
+S+ H + L + V + + + +S++ + + + E
Sbjct: 12 LSLAFHALLL-ITTDEAQVFAMPAGNPTQSVSINMVSMPKVAPAQPEQTQTEQSKPESVK 70
Query: 68 SQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQK 127
+ + K + A + + K
Sbjct: 71 PTPVQEVVKTPPVKPKVEPYKPKPQTVKKTVPAEQVPSKSVAKPQPEKVERTAETAQKPA 130
Query: 128 ISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVI 187
+ Q + I ++ + + +RKR + +
Sbjct: 131 PTPNQQPSQPTAASQGITSQPILVDKPALVSAQVQPRYPRIARKRGIEGTVMYEIWLDAQ 190
Query: 188 AN 189
N
Sbjct: 191 GN 192
>gi|308274276|emb|CBX30875.1| hypothetical protein N47_E43870 [uncultured Desulfobacterium sp.]
Length = 95
Score = 40.7 bits (93), Expect = 0.22, Method: Composition-based stats.
Identities = 17/86 (19%), Positives = 33/86 (38%), Gaps = 6/86 (6%)
Query: 169 SRKRIPSQDAIAIVRNRVIANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKINVDVVGG 227
+ A +R+ ++ N P K+F K +V + F + + G V + G
Sbjct: 1 MLSEKYLAENYAYIRDLIMKNLKYPQMAKKFGWKGKVVVSFLIKENGSVENSKIIAGSG- 59
Query: 228 TELVRRMLRENARKAVIKSQAFRLSP 253
+L +N + ++Q F P
Sbjct: 60 ----YEVLDKNVLSVIKEAQPFPKPP 81
>gi|271500666|ref|YP_003333691.1| TonB family protein [Dickeya dadantii Ech586]
gi|270344221|gb|ACZ76986.1| TonB family protein [Dickeya dadantii Ech586]
Length = 248
Score = 40.7 bits (93), Expect = 0.23, Method: Composition-based stats.
Identities = 26/229 (11%), Positives = 59/229 (25%), Gaps = 26/229 (11%)
Query: 7 LAISMILHVMFLLLLYF-NFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPV---- 61
+ +S++ H + L F +FN + +P + + + + + EP
Sbjct: 16 VLVSVVFHGSLIAGLLFASFNTSVTLPTAPQPIQVMMVNTAPQEAAPAPTAEPEPTQVPE 75
Query: 62 -------------------VQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSS 102
+ + + + + + Q ++
Sbjct: 76 PEPQVQPEPPPLPKPVPIPLPEPKPQPKPKPKPETKPKPVKKLEPQKDKPQERVPEPNAA 135
Query: 103 SSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELL 162
+ + A + + K N+ Q V V+ D E
Sbjct: 136 PASSQTVSHNPAPVSQAPVASAQPAGPKPVNRAQPEYPARALALHIEGRVKVQFDVDESG 195
Query: 163 SKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLN 211
P +R + W + K L V + F++N
Sbjct: 196 RVGNVRVLSAEPQNLFERDIRQA-MRKWRYEENRPG-KDLVVTIIFKVN 242
>gi|220921398|ref|YP_002496699.1| TonB family protein [Methylobacterium nodulans ORS 2060]
gi|219946004|gb|ACL56396.1| TonB family protein [Methylobacterium nodulans ORS 2060]
Length = 335
Score = 40.7 bits (93), Expect = 0.23, Method: Composition-based stats.
Identities = 14/192 (7%), Positives = 40/192 (20%)
Query: 28 QLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSD 87
+P + + V+ +P + + + +
Sbjct: 98 PPDLPEVKPQESPVETPQPMTEAVPPEAVEPKPAEAVQAVELPPEDQVITSTNEAAPLAP 157
Query: 88 QTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKK 147
+ K E + ++ AE+
Sbjct: 158 PPPAVVARPVEEPKPEPKPVLKPVEKPKPKPVEQVRKPPPPKPVREATREAVKPRAAERS 217
Query: 148 SIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMH 207
+ R + S+ + +A+ ++ V +
Sbjct: 218 TEPARQRRAAATASRANAGGSAAAPSANPNALRAWGQQISGAIRARVRSPGAGGGTVTIR 277
Query: 208 FQLNQKGFVLGK 219
F + + G V+
Sbjct: 278 FTVARSGRVMSA 289
>gi|163761134|ref|ZP_02168211.1| putative proline rich protein [Hoeflea phototrophica DFL-43]
gi|162281685|gb|EDQ31979.1| putative proline rich protein [Hoeflea phototrophica DFL-43]
Length = 381
Score = 40.7 bits (93), Expect = 0.23, Method: Composition-based stats.
Identities = 17/176 (9%), Positives = 46/176 (26%)
Query: 5 NGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQF 64
GL+IS+ LH + L L+ + ++ P + V + + + E
Sbjct: 18 RGLSISLGLHGLILAWLFLDPSLPERPPEPEDTAIEVTLVPPPEPEPEPEPEPEPAGEPE 77
Query: 65 KGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYD 124
+E + + + + + + + + E P SP +
Sbjct: 78 ADPVEEAVPEEPAPEPEPEVVEEPAPEPEAPEPEAPEPEAPEPEPEPEPEPEPEPQSPPE 137
Query: 125 KQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIA 180
+ + + + + + + + A
Sbjct: 138 AAALPTPPDAIAADRIPIPTLRPVFEFGEEERGSEPAPDGGRVDAPEPPAQDAATD 193
>gi|162452530|ref|YP_001614897.1| putative TonB protein [Sorangium cellulosum 'So ce 56']
gi|161163112|emb|CAN94417.1| putative TonB protein [Sorangium cellulosum 'So ce 56']
Length = 263
Score = 40.7 bits (93), Expect = 0.23, Method: Composition-based stats.
Identities = 16/117 (13%), Positives = 32/117 (27%), Gaps = 7/117 (5%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPV 61
RL G A+S++ HV + + + + V P
Sbjct: 15 RLGTGTALSIVAHVAVAGAILW---QATRPRAETPKDVEVTFF----APPPPPPPPPPPP 67
Query: 62 VQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRM 118
G ++ + Q + D + + K + +KE A +
Sbjct: 68 PPPGGGAKRPPKVERIEQPKPVKTPDTIYDMPEKPKAKAREPEPKPEPVKEDAPEQP 124
>gi|323216146|gb|EGA00875.1| cell envelope integrity inner membrane protein TolA [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB101509-0077]
Length = 146
Score = 40.7 bits (93), Expect = 0.23, Method: Composition-based stats.
Identities = 18/132 (13%), Positives = 36/132 (27%), Gaps = 13/132 (9%)
Query: 137 DLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDF 196
DL A K K+ + ++ + + D
Sbjct: 24 DLSSGKNAPKTGGGAKGNGQPSKDSGTSGANGGATGADISAYAKQIQVAIQ---SRLYDA 80
Query: 197 KRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPST- 255
++ + +H L G + + GG + + A+ A PS
Sbjct: 81 SLYQGKQCVLHISLAPDGSLKS---ITSEGGDPALCQAALMAAKTA-----KIPKPPSQA 132
Query: 256 -YKSWRNITLFF 266
Y+ ++ L F
Sbjct: 133 VYEKIKDAKLDF 144
>gi|195952779|ref|YP_002121069.1| TonB family protein [Hydrogenobaculum sp. Y04AAS1]
gi|195932391|gb|ACG57091.1| TonB family protein [Hydrogenobaculum sp. Y04AAS1]
Length = 274
Score = 40.7 bits (93), Expect = 0.23, Method: Composition-based stats.
Identities = 31/234 (13%), Positives = 62/234 (26%), Gaps = 14/234 (5%)
Query: 28 QLLVPISRREMLSVDNIYNE-DYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDR-- 84
+ + + + + + I P + S+ + V S++ +
Sbjct: 34 MKTKKPKKNKPIEITLVQKGVPNKAIVPPAIPMPPFPTRKPSKPHRVSKPSIKPSTRNHV 93
Query: 85 -FSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISF 143
K A + S + ES SP K K
Sbjct: 94 NRPSTQKYEALPSRILNSLPKSSYKPYIESESKSTASSPVPSSK---PNTKTSLPSTPIA 150
Query: 144 AEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLR 203
E + + ++ S + S + + + K K
Sbjct: 151 KEGQKHYNAKANLNLNIKQFVKKEESVYQYLSWLIRYLNKQARERDLYPKEAKKLGIKGE 210
Query: 204 VKMHFQLNQKGFV--LGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPST 255
V + +N+ G + V G ++L E+A K + + FR P
Sbjct: 211 VVVRVTINKNGTIDMSSLRVVQSSG-----YKILDESAPKIIYELSPFRKPPKK 259
>gi|262404183|ref|ZP_06080738.1| TolA protein [Vibrio sp. RC586]
gi|262349215|gb|EEY98353.1| TolA protein [Vibrio sp. RC586]
Length = 331
Score = 40.7 bits (93), Expect = 0.23, Method: Composition-based stats.
Identities = 30/226 (13%), Positives = 73/226 (32%), Gaps = 10/226 (4%)
Query: 47 EDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKG 106
E ++K + + +++ V + ++ + + A E K +
Sbjct: 113 EKERAAKAEAERKVKEDAAKKAEQERVAKEAAAAKAEQQRIEREKEAKLAEEKAKREKEI 172
Query: 107 EQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVE 166
++ L + + K K K + A++ +++ + + +
Sbjct: 173 AAKAEQDRLAKEKAAKEAADKTKKEKEKAAKAEADRKAQEAALNDIFGSLSDENQQNNAA 232
Query: 167 KSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVG 226
+ AI + N + F+ + K++ +L G ++ V+
Sbjct: 233 RQQFVTSEVGRYGAIYTQLIRQNLLVEDSFRGKQ---CKVNLKLIPTGTGALLGSLTVLD 289
Query: 227 GTELVRRMLRENARKAVIKSQAFRLS---PSTYKSWRNITLFFVPS 269
G L ++AV + +F L P + +NI L P
Sbjct: 290 GESR----LCAATKRAVAQVNSFPLPKDQPDVVEKLKNINLTVAPE 331
>gi|302652428|ref|XP_003018064.1| MATH and UCH domain protein, putative [Trichophyton verrucosum HKI
0517]
gi|291181669|gb|EFE37419.1| MATH and UCH domain protein, putative [Trichophyton verrucosum HKI
0517]
Length = 1467
Score = 40.7 bits (93), Expect = 0.24, Method: Composition-based stats.
Identities = 29/231 (12%), Positives = 69/231 (29%), Gaps = 22/231 (9%)
Query: 22 YFNFNVQLLVPISRREMLSVDNIYNEDYHS---SKYKKIEEPVVQFKGSSQENLVRDFSV 78
YF+ + P E +++ ++ + VQ ++ + D S
Sbjct: 952 YFSIPEFVPPPPVPNETDMKEDLPAPPSPPLVENEEQPQPAQEVQPSSQDEDVEMNDASP 1011
Query: 79 QENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDL 138
+E + + +E S+ E + ++A + ++ + + +A EQ
Sbjct: 1012 EEAPTQPNQNQDEPEQHSEHIPSAPEPPEHEMSDNAPEQPEINGVEPTSVPEAQTDEQAA 1071
Query: 139 QGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIA-----IVRNRVIANWNIP 193
A + D ++ ++ S + P I RN V + +
Sbjct: 1072 NEAIIASIIAQDLALLDQSQEMDTSGSFTEANGIPPPPPMIDEEAAGSPRNEVEESREVQ 1131
Query: 194 SDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVG--GTELVRRMLRENARKA 242
+ + G V+ E + +E ++A
Sbjct: 1132 EHHPGSE------------DSQMEGSPIVESQNDAPEETNAQTSQEEVQRA 1170
>gi|225163850|ref|ZP_03726145.1| protein TolA [Opitutaceae bacterium TAV2]
gi|224801531|gb|EEG19832.1| protein TolA [Opitutaceae bacterium TAV2]
Length = 351
Score = 40.7 bits (93), Expect = 0.24, Method: Composition-based stats.
Identities = 43/321 (13%), Positives = 84/321 (26%), Gaps = 66/321 (20%)
Query: 2 RLENGLAISMILHVMFLL-LLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP 60
R + A+S +LHV +L +LYF+ E V +DY S+ K+ P
Sbjct: 35 RSPSAFALSTLLHVALVLAVLYFSSISAREKAPVVTETFEVVAGPGDDYTSTAAPKLGNP 94
Query: 61 ------------------------------------------------VVQFKGSSQENL 72
V+
Sbjct: 95 TGIEFDAPAPLPALPAPPEPEPPAPPAPPAPATPPVPVPVTPVEVAPAAVEPIKLPPIKP 154
Query: 73 VRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKAT 132
+ +E T + A + + S++ + + + +
Sbjct: 155 PKPKKTKEPAKPKQPATDSPAADATPAKPSNTSASRTTSYTDFQKQNPGVGKSHTSQTSP 214
Query: 133 NKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQ-------DAIAIVRNR 185
N + IDT R ++ S + + ++ A V+ +
Sbjct: 215 NARSGASAGPPVTARKIDTKGFRDGLRDGTSTTSRGAGGTALTRAEQSILDSYFAYVKQQ 274
Query: 186 VIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIK 245
+ P L + F L+ G V V G E ++ AV +
Sbjct: 275 IRNAHEKPPGLSDS--LSTDVAFMLSASGNVSQVRIVRTSGSNE-----FDDSVVAAVKR 327
Query: 246 SQAFRLSPSTYKSWRNITLFF 266
+ + + ++L F
Sbjct: 328 VRLRPRPDNKSEL---LSLTF 345
>gi|207728188|ref|YP_002256582.1| hypothetical tona-related protein (partial sequece c terminus)
[Ralstonia solanacearum MolK2]
gi|206591433|emb|CAQ57045.1| hypothetical tona-related protein (partial sequece c terminus)
[Ralstonia solanacearum MolK2]
Length = 73
Score = 40.7 bits (93), Expect = 0.24, Method: Composition-based stats.
Identities = 13/62 (20%), Positives = 22/62 (35%), Gaps = 6/62 (9%)
Query: 209 QLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPSTYKSWRNITLFFVP 268
Q+ G +L + G E +AV +S S K+ ++ L F P
Sbjct: 18 QMAPDGSILSRRLTKSSGNG-----AYDEAVLRAVDRSDPLPRDTSG-KAPSSVILTFRP 71
Query: 269 SK 270
+
Sbjct: 72 KE 73
>gi|71736885|ref|YP_275036.1| TonB domain-containing protein [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|71557438|gb|AAZ36649.1| tonB domain protein [Pseudomonas syringae pv. phaseolicola 1448A]
gi|320324429|gb|EFW80507.1| TonB domain-containing protein [Pseudomonas syringae pv. glycinea
str. B076]
gi|320328163|gb|EFW84167.1| TonB domain-containing protein [Pseudomonas syringae pv. glycinea
str. race 4]
Length = 275
Score = 40.7 bits (93), Expect = 0.24, Method: Composition-based stats.
Identities = 13/112 (11%), Positives = 37/112 (33%)
Query: 8 AISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGS 67
I++ +H L + Q L PI+R +++ + + P V+ +
Sbjct: 52 VIALAVHAAGFLWFRNSAPAQPLPPITRPMPIAMQMVARPTPPAPATPAAAAPAVEQPTA 111
Query: 68 SQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMP 119
+ + + + + + + K ++ + A K++
Sbjct: 112 PPPVIPAEPAKPLAAAPKPETPRPQPAKPQAKPQQKAQQQVAEKQAPAAAPQ 163
>gi|167912314|ref|ZP_02499405.1| TolA protein [Burkholderia pseudomallei 112]
Length = 336
Score = 40.7 bits (93), Expect = 0.24, Method: Composition-based stats.
Identities = 26/208 (12%), Positives = 56/208 (26%), Gaps = 10/208 (4%)
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
+ + Q ++ + E R +Q K + + + ++ K + E A +
Sbjct: 139 EREKQKQAEKLKQQQLAEQQQRKLEQQKLEQQKKQEQLAAQKKADAEKAEKAEKAAKAAA 198
Query: 123 YDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIV 182
K + +++ Q + + S V
Sbjct: 199 AAKANAAAKAKLDKERQARLAQLQGIAGGGSGGGEGLAKSGTGTGSGGNAASPG-YADKV 257
Query: 183 RNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKA 242
R RV N L + + G VL G + + A
Sbjct: 258 RRRVKPN---IVWAGERDSLVTVVAIRCTPSGDVLSTSIRRSSGNSGW-----DQAVISA 309
Query: 243 VIKSQAFRLSPSTYKSWRNITLFFVPSK 270
+ S + ++ IT+ F ++
Sbjct: 310 IQASVPLP-PDTNGRTPSEITITFKAAE 336
>gi|73542541|ref|YP_297061.1| TonB, C-terminal [Ralstonia eutropha JMP134]
gi|72119954|gb|AAZ62217.1| TonB, C-terminal [Ralstonia eutropha JMP134]
Length = 306
Score = 40.7 bits (93), Expect = 0.24, Method: Composition-based stats.
Identities = 28/275 (10%), Positives = 74/275 (26%), Gaps = 22/275 (8%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
L LAIS+++H++ L++ V + L V + ++ + +
Sbjct: 18 LAKALAISVVVHLVLLMVRIAAPEVFEIKRSD--AALDVVLVNSKSAQKPRNANVLAQAN 75
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
G + + + + A + P
Sbjct: 76 LDGGGDHDQQRATTPLPAQTVSQDGDLVRQVQRRVEQLEQEQQRLMTQSREAAPAVRSQP 135
Query: 123 YDKQK--------ISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIP 174
+ ++ + ++++ RP + +L + +
Sbjct: 136 LKPGERRQDDPLRGQDDRTSTDEMAKLEAEIGRNLEQYAKRPKRYQLTATSAREVDYAQY 195
Query: 175 SQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQ------LNQKG-FVLGKINVDVVGG 227
+ R +++ + + +L + ++ N+ G V V G
Sbjct: 196 YDRLRRKIEARGTSDFPQHNGKPLYGQLILVINVNRLGKLGYNRDGYNVDAIDVVKSSGD 255
Query: 228 TELVRRMLRENARKAVIKSQAFRLSPSTYKSWRNI 262
L A V + F + + ++I
Sbjct: 256 -----PALDRQAVAIVRAAAPFGPFTAEMAARQDI 285
>gi|58039000|ref|YP_190964.1| TonB protein [Gluconobacter oxydans 621H]
gi|58001414|gb|AAW60308.1| TonB protein [Gluconobacter oxydans 621H]
Length = 277
Score = 40.7 bits (93), Expect = 0.25, Method: Composition-based stats.
Identities = 27/216 (12%), Positives = 49/216 (22%), Gaps = 7/216 (3%)
Query: 41 VDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKR 100
V H E P + Q++ D Q
Sbjct: 48 VLLWAVTSAHPQPILAAEPPPAAISIDLAPVPAPVPAPQQDVDPGPQQAVASTEPQPEDP 107
Query: 101 SSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDT-VVVRPDKK 159
+ K S AEK + V +P
Sbjct: 108 PKVEAPPSPAPSPPVPVPKPEKIRPHKPSVHKPLPPVPVKAPPAEKTTAPRTVEAQPTTS 167
Query: 160 ELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKK-LRVKMHFQLNQKGFVLG 218
+ SS + R+ P + + + +HF +++KG VL
Sbjct: 168 PSAASASTSSHASHDPVTWQGELLARLERFKRYPQEAQSTHQEGTSLLHFVMDRKGHVLS 227
Query: 219 KINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPS 254
G +L + +++ + P
Sbjct: 228 ASLKRSAGHD-----LLDAETLALIHRAEPLPIPPD 258
>gi|32879577|emb|CAD27897.2| TonB protein [Photobacterium damselae subsp. piscicida]
gi|34494599|emb|CAE46550.1| TonB protein [Photobacterium damselae subsp. piscicida]
Length = 252
Score = 40.7 bits (93), Expect = 0.25, Method: Composition-based stats.
Identities = 29/240 (12%), Positives = 82/240 (34%), Gaps = 26/240 (10%)
Query: 8 AISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKG- 66
A+S+I+H + L + + N + ++ +S++ + + + + V+ +
Sbjct: 11 AVSVIIHGLILSAVP-SQNAIAMPIGNQIAPVSLNLVTAPIAPPPPAQDVAKAEVKPQKS 69
Query: 67 -SSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
+ + + +V++ + + + K + +Q L ++ + S
Sbjct: 70 VKKTQQIEQKTAVKKLVKKTTPKKKAAKKVANKTTKTKKAEQQPLVKNRDGKPVKSATKP 129
Query: 126 QKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNR 185
Q SK N+ + + +K + + P+ + + P ++ +
Sbjct: 130 QPQSKPKNQTSQVVNTTNNKKALLSSGTQSPELVSRPTFATRPGPVSYPRLAKRRGIQGQ 189
Query: 186 VIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIK 245
V + ++ KG + + + G +L + A KA+ K
Sbjct: 190 ------------------VMVEIWIDPKGKQIKQKVISSSGT-----EILDQAALKAIKK 226
>gi|71908779|ref|YP_286366.1| hypothetical protein Daro_3166 [Dechloromonas aromatica RCB]
gi|71848400|gb|AAZ47896.1| hypothetical protein Daro_3166 [Dechloromonas aromatica RCB]
Length = 274
Score = 40.7 bits (93), Expect = 0.25, Method: Composition-based stats.
Identities = 31/250 (12%), Positives = 71/250 (28%), Gaps = 31/250 (12%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
A+S+++H + L++ P S K
Sbjct: 19 AFAVSLLIHALVLMI-----------PRHDP--------------SGTASPPRLEARLAK 53
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
++ E + S + ++ + T K + ++ + + E A + + D
Sbjct: 54 TAAPEAVSAPASSAKAAKTKPERARILTTNKPGKTTVAATPKWSAAEKADMNRFLDELDT 113
Query: 126 QKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNR 185
Q + ++ D L + + + + + R
Sbjct: 114 QAKAAPKPTLAQRSLAMARDQAREQARQEAADGASLELRPNAAPPDPFSLEMYVDGLVKR 173
Query: 186 VIANWNIPSDFKRFKKLR-VKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVI 244
+ + + R K +R + F+LN G + V G + ++ V
Sbjct: 174 LNRSAAFVKNDPRNKGIRAAAVEFKLNPDGTMKFFKVV--NEGDQAEEIAFVKSV---VE 228
Query: 245 KSQAFRLSPS 254
+S F P
Sbjct: 229 RSIPFSPFPE 238
>gi|195491456|ref|XP_002093569.1| GE20682 [Drosophila yakuba]
gi|194179670|gb|EDW93281.1| GE20682 [Drosophila yakuba]
Length = 469
Score = 40.7 bits (93), Expect = 0.25, Method: Composition-based stats.
Identities = 19/153 (12%), Positives = 55/153 (35%)
Query: 15 VMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVR 74
V +LL ++L + V + +++ + EE K + +V+
Sbjct: 4 VALILLFLAISQARVLNLPQEAIDIPVAIVEDKEQPVALPLVKEELKEAAKPEEVKPIVQ 63
Query: 75 DFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNK 134
+ + + + K + + + + K +KE L ++K + K
Sbjct: 64 EEKAKYLDEEVKPEIKEIKEQIKEQLNDLEKKPLEIKEKPLEIEEKPLEIEEKPLEIEQK 123
Query: 135 EQDLQGISFAEKKSIDTVVVRPDKKELLSKVEK 167
++++ + + +T ++P+ E+ +
Sbjct: 124 PREIKEEAQLPEIKQETAEIKPETAEIKKETAD 156
>gi|114776927|ref|ZP_01451970.1| TonB, C-terminal [Mariprofundus ferrooxydans PV-1]
gi|114553013|gb|EAU55444.1| TonB, C-terminal [Mariprofundus ferrooxydans PV-1]
Length = 147
Score = 40.7 bits (93), Expect = 0.25, Method: Composition-based stats.
Identities = 19/121 (15%), Positives = 41/121 (33%), Gaps = 10/121 (8%)
Query: 148 SIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFK-KLRVKM 206
+ V P K + ++ + ++R + + P+ +R + V +
Sbjct: 34 KTEPVTALPATKPRQIQTASATTAVVDEDKLRLLLRKHLESFKFYPASARRRNIEGDVDV 93
Query: 207 HFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPSTYKSWRNITLFF 266
F L + G + G +L A + V ++Q F ++ Y+ L F
Sbjct: 94 GFTLTRDGSADQVTVLHGSG-----YAVLDHAALETVYRAQPFPVADGRYQ----FRLRF 144
Query: 267 V 267
Sbjct: 145 R 145
>gi|33519797|ref|NP_878629.1| tolA protein [Candidatus Blochmannia floridanus]
gi|33504142|emb|CAD83404.1| tolA protein [Candidatus Blochmannia floridanus]
Length = 434
Score = 40.7 bits (93), Expect = 0.25, Method: Composition-based stats.
Identities = 19/115 (16%), Positives = 35/115 (30%), Gaps = 13/115 (11%)
Query: 156 PDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGF 215
+ ++ K ++ + + + + K+ QL G
Sbjct: 331 AKIINNNQYIANNNIKTEEINFYKNMISESIQKKF---YNASDYAGKECKLKIQLAPDGK 387
Query: 216 VLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSP--STYKSWRNITLFFVP 268
++ VD + G L A AV + P YK ++N L F P
Sbjct: 388 LVS---VDTLSGDLS----LSHAATVAVKLAN-IPAPPNIDIYKIFKNTILKFSP 434
>gi|328542887|ref|YP_004302996.1| hypothetical protein SL003B_1267 [polymorphum gilvum SL003B-26A1]
gi|326412633|gb|ADZ69696.1| Conserved domain protein [Polymorphum gilvum SL003B-26A1]
Length = 361
Score = 40.7 bits (93), Expect = 0.25, Method: Composition-based stats.
Identities = 19/179 (10%), Positives = 46/179 (25%), Gaps = 5/179 (2%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
GLA+S++LH + + L V+ P S + + V + + P
Sbjct: 15 GLAVSLLLHALAGVALLV--EVEPFAPASEQAPIEVVLVPETSDAETPELPDPAPQEPET 72
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALL---RMPVSP 122
+ + S D + + + ++ R+
Sbjct: 73 PEPETPEPEEPSPTAAPMPAPDVMAQTQEPPGDQPTPLPVLQPVVEFGDADGGSRIAPDG 132
Query: 123 YDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAI 181
+ + + + E ++V + + S + A
Sbjct: 133 DAADQAEAPERLDLEAEDGETTEADPAESVEDEAADTSQTPEADLSEAVEPEILEPEAA 191
>gi|308511369|ref|XP_003117867.1| CRE-SPR-3 protein [Caenorhabditis remanei]
gi|308238513|gb|EFO82465.1| CRE-SPR-3 protein [Caenorhabditis remanei]
Length = 1301
Score = 40.7 bits (93), Expect = 0.25, Method: Composition-based stats.
Identities = 30/224 (13%), Positives = 56/224 (25%), Gaps = 14/224 (6%)
Query: 45 YNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSS 104
+ + K K E V+ +E K + S
Sbjct: 779 QSATVATQKTVKPPEKAVRHLEQLAAQPEVQQQAEEVQKSAKTSQPRKKGVKPLKSTEQS 838
Query: 105 KGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSK 164
+ + S + S+ K + + + E + V E+ S+
Sbjct: 839 VKTDQKPARQVQQPAKSASKSENGSQQPAKPAEQKSVLKKEAPKLAQVDNLEKAAEVNSQ 898
Query: 165 VEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDV 224
SS S+ A VR + + P+D K FK + V
Sbjct: 899 QAASSNSTQKSKRASQSVRFQESPSSTSPADVKGFKPEEYLSQIKTVPSTVVQSVAVSQP 958
Query: 225 VGGTELVRRMLRENARKAVIKSQAFRLSPSTYKSWRNITLFFVP 268
+ ++Q ++ + R F P
Sbjct: 959 KSIVKS--------------QAQPLEKPNISFTARREPIFKFTP 988
>gi|330957278|gb|EGH57538.1| tonB protein [Pseudomonas syringae pv. maculicola str. ES4326]
Length = 249
Score = 40.7 bits (93), Expect = 0.26, Method: Composition-based stats.
Identities = 14/156 (8%), Positives = 37/156 (23%), Gaps = 6/156 (3%)
Query: 100 RSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKK 159
+ + P + + + + + + T
Sbjct: 78 MPEVVEAPKPEIVVPEKVEKPKPKPQPPKPQKKPEPPQEKPAAEKPVDTPPTTAKPEKST 137
Query: 160 ELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLG 218
S + + + + P D +R + ++ F ++ G VL
Sbjct: 138 APTPPAPAPSPPSNALPNWQGDLLSHLGKYKKYPEDARRRGMQGVARLRFVVDADGNVLS 197
Query: 219 KINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPS 254
+ G L + + ++Q P
Sbjct: 198 YSIANTSGS-----PALDRATMEMIRRAQPLPKPPK 228
>gi|292493730|ref|YP_003529169.1| MscS Mechanosensitive ion channel [Nitrosococcus halophilus Nc4]
gi|291582325|gb|ADE16782.1| MscS Mechanosensitive ion channel [Nitrosococcus halophilus Nc4]
Length = 563
Score = 40.7 bits (93), Expect = 0.26, Method: Composition-based stats.
Identities = 22/162 (13%), Positives = 53/162 (32%), Gaps = 11/162 (6%)
Query: 25 FNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDR 84
F+ ++ P + + + + + + + V + ++E + V+E +
Sbjct: 117 FSFEVKPPAAIGQ----------EKQALEEQGRKAEVEALEKKAEETTEKIEQVKETVEE 166
Query: 85 FSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFA 144
+ ATE + K EQ +A ++ + Q ++ + + A
Sbjct: 167 AKLEATQAATEKAALQKEVEKREQ-EALAAKQQLEAAKAKAQATGGLADQREVEKLAEEA 225
Query: 145 EKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRV 186
EK L K + + K ++ I +R
Sbjct: 226 EKLEKAATTEEKRLATLEVKEQAAQEKATTTETEIEKLRQEF 267
>gi|322375546|ref|ZP_08050058.1| putative surface protein [Streptococcus sp. C300]
gi|321279254|gb|EFX56295.1| putative surface protein [Streptococcus sp. C300]
Length = 639
Score = 40.3 bits (92), Expect = 0.26, Method: Composition-based stats.
Identities = 5/123 (4%), Positives = 23/123 (18%)
Query: 73 VRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKAT 132
+ + T Q + + ++
Sbjct: 335 PAQKPADKPKTPAQKPAEKPKTPAPKPADKPKTPAQKPADKPKTPAQKPADKPKTPAQKP 394
Query: 133 NKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNI 192
++ + +S + + + + +V ++W
Sbjct: 395 TEKAKETTSKQDKSQSKAQSGWVGNYYLKSDGKRAKNEWVDGGRYYVDSDGKKVKSDWIY 454
Query: 193 PSD 195
+
Sbjct: 455 DKN 457
>gi|299116982|emb|CBN75086.1| dynein heavy chain [Ectocarpus siliculosus]
Length = 4791
Score = 40.3 bits (92), Expect = 0.26, Method: Composition-based stats.
Identities = 19/198 (9%), Positives = 53/198 (26%), Gaps = 10/198 (5%)
Query: 70 ENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKIS 129
E++ + + +E R D+ + + ++ + E + +
Sbjct: 3310 EDMQKGLAEKERRLREKDELANAKLQQMVSGQNEAERRKGEAEILSKDLQQQNDRIAQRR 3369
Query: 130 KATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIAN 189
E + +S + +P E+ + + + A+AI+
Sbjct: 3370 HQAETELSEAEPALLSAQSSVRSIKKPQLDEIRT-LTRPPPAVQTVLTAVAIMLGHQEPT 3428
Query: 190 WNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAF 249
W+ + + + + V + + ++ +A
Sbjct: 3429 WSEVRRVISKADFIATV-VNFDTD-SLTNPVIKTVEDVFKAAGDLTADSVTRASKACGPL 3486
Query: 250 RLSPSTYKSWRNITLFFV 267
Y W N + F
Sbjct: 3487 ------YN-WVNSQINFS 3497
>gi|195585390|ref|XP_002082472.1| GD25204 [Drosophila simulans]
gi|194194481|gb|EDX08057.1| GD25204 [Drosophila simulans]
Length = 713
Score = 40.3 bits (92), Expect = 0.26, Method: Composition-based stats.
Identities = 21/182 (11%), Positives = 46/182 (25%), Gaps = 22/182 (12%)
Query: 26 NVQLLVPISRREMLSVDNI-YNEDYHSSKYKKIEEPVVQFKG--------SSQENLVRDF 76
+PI ++ +D+ D + + +E + K +EN
Sbjct: 477 PPLPPLPIDEVHVVPIDSKNSETDLKNLPVEAVEANPPEAKPLDVNLTVDKPKENPPAAV 536
Query: 77 SVQENGDRF-------SDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKIS 129
+ + S+ A + E ++ + E LL+ + +K+
Sbjct: 537 ASLPDKPEIGSSLLSASNTIDGAAIKKEEDVAAEEQKESKANADELLKTQKELKETKKLL 596
Query: 130 KA------TNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVR 183
+ + D + K K + K R
Sbjct: 597 AKTVGELNEELAKKNSFNQPPLELQKDEPLDAVAKVAEEPKKAEIKLKESQPVAEEKKER 656
Query: 184 NR 185
R
Sbjct: 657 RR 658
>gi|164424534|ref|XP_958010.2| hypothetical protein NCU09968 [Neurospora crassa OR74A]
gi|157070555|gb|EAA28774.2| predicted protein [Neurospora crassa OR74A]
Length = 1281
Score = 40.3 bits (92), Expect = 0.27, Method: Composition-based stats.
Identities = 19/182 (10%), Positives = 44/182 (24%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
L IS H + L + P + ++ + + + + + Q
Sbjct: 515 SLVISKDQHSAIMAWLNEQMMDPEMRPQKTMLLKHIEVLRDTARNFDDFFMGLKRHAQHL 574
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
++ E + A ++ + +P
Sbjct: 575 KNTPFKPPPPGKTMELPPTKPMTITPIPAPTFPMPKPKTAPAPAPSIESIKAVKETPIPP 634
Query: 126 QKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNR 185
I K + A+K D + + L ++ S K + V
Sbjct: 635 PSIGPYKPKATPATELPIADKPIADKPIADKPIADKLPRIFVPSAKTPEDRAIFNKVVAD 694
Query: 186 VI 187
+
Sbjct: 695 IN 696
>gi|330938081|ref|XP_003305675.1| hypothetical protein PTT_18586 [Pyrenophora teres f. teres 0-1]
gi|311317181|gb|EFQ86215.1| hypothetical protein PTT_18586 [Pyrenophora teres f. teres 0-1]
Length = 880
Score = 40.3 bits (92), Expect = 0.27, Method: Composition-based stats.
Identities = 7/152 (4%), Positives = 31/152 (20%)
Query: 24 NFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGD 83
+ + + + V + + +P + +
Sbjct: 77 SLPMSRTNSSNITPAIPVVPVTPIQASTPNTASKVKPKSDAVEPATPKATSTPTSAIKPQ 136
Query: 84 RFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISF 143
+ ++ + A +P + ++ ++
Sbjct: 137 PTTPSKTVTKETVVVPQTPKEPTPREASRKAKGETEQTPKSTPETRRSISEIAAKDASKA 196
Query: 144 AEKKSIDTVVVRPDKKELLSKVEKSSRKRIPS 175
E + + K+ K + +
Sbjct: 197 KENSKKIQPLTQTTPKKDTQKEPARTPAANAT 228
>gi|237809443|ref|YP_002893883.1| protein TolA [Tolumonas auensis DSM 9187]
gi|237501704|gb|ACQ94297.1| protein TolA [Tolumonas auensis DSM 9187]
Length = 353
Score = 40.3 bits (92), Expect = 0.27, Method: Composition-based stats.
Identities = 16/157 (10%), Positives = 49/157 (31%), Gaps = 1/157 (0%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKK-IEEPV 61
+ + IS+ILH + +L+ +N+ + + K+ + +
Sbjct: 5 MSGPVVISIILHALLILMFILKWNLDKPKRPAGGGGGGGGVVNAVVIDQLKFDQHKQFIK 64
Query: 62 VQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVS 121
Q +E + + + A + ++ + ++ ++ + R +
Sbjct: 65 QQKAKKVEEAKEQAAEKAAAAEAVRQEKVEKAIRLKQEKQQQKEAKEKERKLEVERQKLD 124
Query: 122 PYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDK 158
K + K +E + + + +K
Sbjct: 125 AEKKITLEKKKKEELKKKLEEEKKLADQKEAEEKAEK 161
>gi|50547155|ref|XP_501047.1| YALI0B18216p [Yarrowia lipolytica]
gi|49646913|emb|CAG83300.1| YALI0B18216p [Yarrowia lipolytica]
Length = 633
Score = 40.3 bits (92), Expect = 0.27, Method: Composition-based stats.
Identities = 14/158 (8%), Positives = 42/158 (26%), Gaps = 1/158 (0%)
Query: 15 VMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVR 74
+ ++ + V+ + P + ++ + +K P + ++ +
Sbjct: 157 LGLAQIIVDSLPVKPVNPEDPTNPDE-KPVNPDEKPVNPDEKPVNPDEKPVNPDEKPVNP 215
Query: 75 DFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNK 134
D D+ ++ + + K + +++ S+ K
Sbjct: 216 DEKPVNPNDKPANPDDKPTNLDPSVIEDLEKELKYIEDVQKEIEDKLKEAATTDSELKGK 275
Query: 135 EQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKR 172
DL KK I+ + +
Sbjct: 276 IDDLNKQIEDLKKLINDLSSPSKTVIDSNSSIADQTYA 313
>gi|118581296|ref|YP_902546.1| TonB family protein [Pelobacter propionicus DSM 2379]
gi|118504006|gb|ABL00489.1| TonB family protein [Pelobacter propionicus DSM 2379]
Length = 283
Score = 40.3 bits (92), Expect = 0.27, Method: Composition-based stats.
Identities = 26/225 (11%), Positives = 57/225 (25%), Gaps = 12/225 (5%)
Query: 41 VDNIYNEDYH---SSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHAT--E 95
+D + ++ Q + +E R ++G R
Sbjct: 45 IDLQQMPEAMLPREPAQAEVRRRSDQRRRVEREAAPRGRDSVDSGVRPQPPVSRPLPGRA 104
Query: 96 NETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVR 155
E S + V+ K + + Q ++ R
Sbjct: 105 GEPGSPSLPGARPQRESRVTEGSSVAGLLKPRSPAGRPQGQPRLFPGAGGMARLEENYRR 164
Query: 156 PDKKELLSKVEKSSRKRIPS-QDAIAIVRNRVIANWNIPSDFKRFK-KLRVKMHFQLNQK 213
+K++ K + N V W P + R + + N++
Sbjct: 165 KFEKDVAEGDTKFLNTDDIQFGSFLRRFENSVYGVWRYPEEASRNGIQGVTPVRITFNRR 224
Query: 214 GFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPSTYKS 258
G V+ ++ G ++L + + + P Y
Sbjct: 225 GEVVHVELLESSGA-----KVLDDEVFRTLKLIGPVGGFPRGYDK 264
>gi|329943314|ref|ZP_08292088.1| energy transducer [Chlamydophila psittaci Cal10]
gi|332287890|ref|YP_004422791.1| putative exported TonB protein [Chlamydophila psittaci 6BC]
gi|313848462|emb|CBY17466.1| putative exported TonB protein [Chlamydophila psittaci RD1]
gi|325507186|gb|ADZ18824.1| putative exported TonB protein [Chlamydophila psittaci 6BC]
gi|328814861|gb|EGF84851.1| energy transducer [Chlamydophila psittaci Cal10]
gi|328915154|gb|AEB55987.1| conserved hypothetical protein [Chlamydophila psittaci 6BC]
Length = 250
Score = 40.3 bits (92), Expect = 0.27, Method: Composition-based stats.
Identities = 26/267 (9%), Positives = 72/267 (26%), Gaps = 31/267 (11%)
Query: 3 LENGLAIS---MILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEE 59
++ L S +I H + LL ++ P ++ + +
Sbjct: 1 MKKALPYSLFAIIFHGACIALLSYS---PANKPPTKPVPFKEKIVALRE--PLPSVATVT 55
Query: 60 PVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMP 119
+ + S Q+ + + K + + K + +
Sbjct: 56 TPQPTLKEHTDKRDIEPSPQKPSVKPPVEKKKTEDIQKPCVPNKPKEKPKPQPKGENHPT 115
Query: 120 VSPY--DKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQD 177
+ + K+ + + L + + V +K+ + +++
Sbjct: 116 ANKSIGKEAKLKAIADLTKTLSKHLDDSNARLADITVPTNKQLAVQTTLATTQDEEL--- 172
Query: 178 AIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRE 237
+ V++ L +G + + + + +E ++R
Sbjct: 173 -----------CQLLREHMTLPFSGEVRLKLVLTPQGRIQDCVLLSEISESEKELILMRI 221
Query: 238 NARKAVIKSQAFRLSPSTYKSWRNITL 264
+A F+ YK +NI
Sbjct: 222 HAI-------PFKKFLDKYKISKNIVF 241
>gi|193671578|ref|XP_001952448.1| PREDICTED: nucleosome-remodeling factor subunit NURF301-like isoform
1 [Acyrthosiphon pisum]
Length = 2475
Score = 40.3 bits (92), Expect = 0.27, Method: Composition-based stats.
Identities = 19/197 (9%), Positives = 57/197 (28%), Gaps = 18/197 (9%)
Query: 28 QLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSD 87
+ PI + V ++ + S+ + + +++E +
Sbjct: 1942 PTVKPIEPTPSVPV----------PNNIPESLTQIKTEPPSKSPVNKIPAIKEEPIDSPN 1991
Query: 88 QTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKK 147
+ K E E+ + + Y +Q++ + +
Sbjct: 1992 SFVVTPNYISQSIKNVLKNEDLNPETQEKLLQLQKYQEQQLRDPVPQTSVPSSPARKRPY 2051
Query: 148 SIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMH 207
D + K+ + S ++++ D ++ ++L+ K+
Sbjct: 2052 EADNLAEFEPPKKSTERDNSGSLVSPE--------QSKLYQTLKQGDDHRKMQQLQSKLQ 2103
Query: 208 FQLNQKGFVLGKINVDV 224
L ++ +L K +
Sbjct: 2104 VSLFKQKELLKKDILKK 2120
>gi|268679355|ref|YP_003303786.1| TonB family protein [Sulfurospirillum deleyianum DSM 6946]
gi|268617386|gb|ACZ11751.1| TonB family protein [Sulfurospirillum deleyianum DSM 6946]
Length = 212
Score = 40.3 bits (92), Expect = 0.27, Method: Composition-based stats.
Identities = 15/114 (13%), Positives = 31/114 (27%), Gaps = 1/114 (0%)
Query: 1 MRLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP 60
MR + A+S+ LHV LL ++ ++ L++D P
Sbjct: 1 MRFCSFFALSLFLHVSLFALLN-QLHLPDKTVQNKASSLTLDIQTIHIAPPPPLPHEASP 59
Query: 61 VVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESA 114
Q + +E + + T + + +
Sbjct: 60 KPQPLRTPKEPKITPKLPTKPQKISKPMATTLPAPITQPQEEAPQEALQNDTQE 113
>gi|323221363|gb|EGA05782.1| cell envelope integrity inner membrane protein TolA [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB102109-0047]
Length = 151
Score = 40.3 bits (92), Expect = 0.28, Method: Composition-based stats.
Identities = 18/132 (13%), Positives = 36/132 (27%), Gaps = 13/132 (9%)
Query: 137 DLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDF 196
DL A K K+ + ++ + + D
Sbjct: 29 DLSSGKNAPKTGGGAKGNGQPSKDSGTSGANGGATGADISAYAKQIQVAIQ---SRLYDA 85
Query: 197 KRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPST- 255
++ + +H L G + + GG + + A+ A PS
Sbjct: 86 SLYQGKQCVLHISLAPDGSLKS---ITSEGGDPALCQAALMAAKTA-----KIPKPPSQA 137
Query: 256 -YKSWRNITLFF 266
Y+ ++ L F
Sbjct: 138 VYEKIKDAKLDF 149
>gi|322628903|gb|EFY25684.1| cell envelope integrity inner membrane protein TolA [Salmonella
enterica subsp. enterica serovar Montevideo str.
495297-4]
gi|322658640|gb|EFY54901.1| cell envelope integrity inner membrane protein TolA [Salmonella
enterica subsp. enterica serovar Montevideo str. 19N]
Length = 153
Score = 40.3 bits (92), Expect = 0.28, Method: Composition-based stats.
Identities = 18/132 (13%), Positives = 36/132 (27%), Gaps = 13/132 (9%)
Query: 137 DLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDF 196
DL A K K+ + ++ + + D
Sbjct: 31 DLSSGKNAPKTGGGAKGNGQPSKDSGTSGANGGATGADISAYAKQIQVAIQ---SRLYDA 87
Query: 197 KRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPST- 255
++ + +H L G + + GG + + A+ A PS
Sbjct: 88 SLYQGKQCVLHISLAPDGSLKS---ITSEGGDPALCQAALMAAKTA-----KIPKPPSQA 139
Query: 256 -YKSWRNITLFF 266
Y+ ++ L F
Sbjct: 140 VYEKIKDAKLDF 151
>gi|301346654|ref|ZP_07227395.1| group A colicins tolerance protein [Acinetobacter baumannii AB056]
gi|301511541|ref|ZP_07236778.1| group A colicins tolerance protein [Acinetobacter baumannii AB058]
gi|301596451|ref|ZP_07241459.1| group A colicins tolerance protein [Acinetobacter baumannii AB059]
Length = 136
Score = 40.3 bits (92), Expect = 0.28, Method: Composition-based stats.
Identities = 18/126 (14%), Positives = 39/126 (30%), Gaps = 8/126 (6%)
Query: 129 SKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIA 188
+ A K+Q + + + KK +K + + A ++
Sbjct: 2 ADAKAKQQKAAEDARRKAEIEAEEKAASAKKAQEEAAQKKGEAKKIASSAKRDFEQKIRR 61
Query: 189 NWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQA 248
W++P+ V + F L+ G V + G L + + A+ S
Sbjct: 62 AWDVPTGSSGK---TVSVRFTLSDSGSVSSIVITRSSGDD-----ALDASIKAAIQASAP 113
Query: 249 FRLSPS 254
+ +
Sbjct: 114 YPMPSD 119
>gi|292488403|ref|YP_003531285.1| protein TonB [Erwinia amylovora CFBP1430]
gi|291553832|emb|CBA20877.1| Protein tonB [Erwinia amylovora CFBP1430]
Length = 241
Score = 40.3 bits (92), Expect = 0.28, Method: Composition-based stats.
Identities = 28/221 (12%), Positives = 60/221 (27%), Gaps = 11/221 (4%)
Query: 7 LAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKK---IEEPVVQ 63
L S+ LH + + + Q + + +SV + E + EPV +
Sbjct: 22 LLGSIALHGAVIGAMLYASFHQAVEMPKASQPISVSMVAPETQPEPQAAPHDVAPEPVAK 81
Query: 64 FKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPY 123
+ + ++ + + + K A P +
Sbjct: 82 AEPVPEPVKTEPVAIPQPEPKPKPKPKKKEVVKPEPEVKPRPAAPLETRPAEQAKPSTAP 141
Query: 124 DKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVR 183
K + +R + + + SS + + A R
Sbjct: 142 KKSPTPSSALSSGPRALSVGKPSYPARAFALRIEGRVRVQFDVDSSGQVDNIRILSAEPR 201
Query: 184 N-------RVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVL 217
N + + W + K K L + + F+LN +
Sbjct: 202 NLFEREVKQAMRRWRYEAG-KPAKDLSMNIQFKLNGGSSIS 241
>gi|257460671|ref|ZP_05625772.1| protein TonB [Campylobacter gracilis RM3268]
gi|257442002|gb|EEV17144.1| protein TonB [Campylobacter gracilis RM3268]
Length = 279
Score = 40.3 bits (92), Expect = 0.28, Method: Composition-based stats.
Identities = 40/277 (14%), Positives = 77/277 (27%), Gaps = 28/277 (10%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREML--SVDNI-------YNEDYHSSKYKK 56
G +S++LH + + F P S +M+ S+D+I D +
Sbjct: 8 GFIVSLVLHC-IIAVGVFALLSSAPKPPSMPDMIAFSIDSIMDDAKQGDISDEPNIPPPS 66
Query: 57 IEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALL 116
+ E + + E E+ +
Sbjct: 67 DQSEPEPIPEPEPEPEPEPTPPEPEPIPEPEPIPEPEPIPEPVVEKPKPVEKPKPKPVEK 126
Query: 117 RMPVSPYDKQKISKATNKEQDLQGISFAEKKSI-DTVVVRPDKKELLSKVEKSSRKRIPS 175
PV +K K + +++L K + +SR +
Sbjct: 127 PKPVEKPKPKKEHKVQSSDRNLTAKFDPTKPISLGSGGGGGSSAAGGGSDAITSRGDPSN 186
Query: 176 QDAIAIVRNRVIANWNIPSDFKRFKKLR----VKMHFQLNQKGFVLGKINVDVVGGTELV 231
D + + K +++R V +HF G V G +
Sbjct: 187 SDVGKKIFAIISRYAQSHYP-KNAQRMRKIGVVGVHFTYTASGDVKGLRV-----TSSSN 240
Query: 232 RRMLRENARKAVIKSQ-AFRLSPSTYKSWRNITLFFV 267
L E A AV +++ +F K +++ F
Sbjct: 241 VDSLDEGALSAVERTKGSFP------KVEKDMEFNFS 271
>gi|30260710|ref|NP_843087.1| internalin, putative [Bacillus anthracis str. Ames]
gi|47525825|ref|YP_017174.1| internalin [Bacillus anthracis str. 'Ames Ancestor']
gi|49183546|ref|YP_026798.1| internalin [Bacillus anthracis str. Sterne]
gi|227816577|ref|YP_002816586.1| putative internalin [Bacillus anthracis str. CDC 684]
gi|229602566|ref|YP_002865155.1| putative internalin [Bacillus anthracis str. A0248]
gi|254738834|ref|ZP_05196537.1| putative internalin [Bacillus anthracis str. Western North America
USA6153]
gi|254755058|ref|ZP_05207092.1| putative internalin [Bacillus anthracis str. Vollum]
gi|30254078|gb|AAP24573.1| putative internalin [Bacillus anthracis str. Ames]
gi|47500973|gb|AAT29649.1| putative internalin [Bacillus anthracis str. 'Ames Ancestor']
gi|49177473|gb|AAT52849.1| internalin, putative [Bacillus anthracis str. Sterne]
gi|227006633|gb|ACP16376.1| putative internalin [Bacillus anthracis str. CDC 684]
gi|229266974|gb|ACQ48611.1| putative internalin [Bacillus anthracis str. A0248]
Length = 1070
Score = 40.3 bits (92), Expect = 0.28, Method: Composition-based stats.
Identities = 12/143 (8%), Positives = 39/143 (27%), Gaps = 4/143 (2%)
Query: 50 HSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRS--SSSKGE 107
+ K E + + + + + + +K E + E
Sbjct: 852 SKEEPIKEAEGSKEEPKEPAKEVEGSKEEPKEPAKEVEGSKEEVKEPAKEVEGPKEEVKE 911
Query: 108 QALKESALLRMPVSPYDKQKISKATNKE--QDLQGISFAEKKSIDTVVVRPDKKELLSKV 165
+ P + + K KE ++++G K ++ + +
Sbjct: 912 PTKEVEGPKEEVKEPTKEVEGPKEEVKEPMKEVEGSKEEVKGPTKEAEGSKEEVKEPTTE 971
Query: 166 EKSSRKRIPSQDAIAIVRNRVIA 188
+ S++ + ++ +
Sbjct: 972 VEGSKEVKEPGKEVEGSKDAINQ 994
>gi|87124485|ref|ZP_01080334.1| hypothetical protein RS9917_12765 [Synechococcus sp. RS9917]
gi|86168057|gb|EAQ69315.1| hypothetical protein RS9917_12765 [Synechococcus sp. RS9917]
Length = 527
Score = 40.3 bits (92), Expect = 0.28, Method: Composition-based stats.
Identities = 13/151 (8%), Positives = 40/151 (26%)
Query: 35 RREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHAT 94
+ + V +Y D + +E +++ + + T A
Sbjct: 367 QVNPVRVSLVYPADATPGHLLSVVPVQQLAMLRKREEMLQAARRAQQEAKKRQVTPAQAP 426
Query: 95 ENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVV 154
N + + A ++ PV+ + ++ K + + +
Sbjct: 427 PNLNAAPKPATDKPATTKAKPTAKPVAQPAVKPAAQPVAKPKRQPPTAPVPPPPVLVAPS 486
Query: 155 RPDKKELLSKVEKSSRKRIPSQDAIAIVRNR 185
+ + + + Q +R +
Sbjct: 487 GGLNPMPPAMIMPNRLNQSLEQRYRDAIRAQ 517
>gi|330812609|ref|YP_004357071.1| hypothetical protein PSEBR_a5539 [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327380717|gb|AEA72067.1| Conserved hypothetical protein [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
Length = 251
Score = 40.3 bits (92), Expect = 0.29, Method: Composition-based stats.
Identities = 30/251 (11%), Positives = 68/251 (27%), Gaps = 38/251 (15%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRRE-MLSVDNIYNEDYHSSKYKKIEEPVVQF 64
LA+ + +H + + L N PI + V+ K+ P
Sbjct: 14 SLAVVLGVHALAIALA---LNWTSRAPIELPPQAMMVELAPVPAPPPPAPPKVVTPPQPP 70
Query: 65 KGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYD 124
+ + L + + K K K + KE + P
Sbjct: 71 EPVEELPLPKLAEAPKPEISVPKPVKPKPKPQPPKPKPVEKKPEPPKEQPSEQKPSDTPP 130
Query: 125 KQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRN 184
Q +++ + + S + + +
Sbjct: 131 TQSVAEKSAQPAP----------------------------GPSPAQSAAKANWQGTLLA 162
Query: 185 RVIANWNIPSDFKR-FKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAV 243
+ P ++ K+ ++ F ++ +G VL V G +L + + +
Sbjct: 163 HLGKYKKYPPRAQQMNKEGTNRLRFVVDAEGNVLSFELVGSSGTD-----LLDKATLEMI 217
Query: 244 IKSQAFRLSPS 254
++Q P+
Sbjct: 218 RRAQPLPKPPA 228
>gi|328470247|gb|EGF41158.1| TonB-like protein [Vibrio parahaemolyticus 10329]
Length = 247
Score = 40.3 bits (92), Expect = 0.29, Method: Composition-based stats.
Identities = 21/203 (10%), Positives = 54/203 (26%), Gaps = 5/203 (2%)
Query: 43 NIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSS 102
+ V S+ + + + Q +
Sbjct: 23 ISQENKVFAMPAGNPASSVSLNLVSAPPPTLEKPTPENVEPPKEPQPQKQPEPERKIVKK 82
Query: 103 SSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELL 162
++A+K+ + + P +K+ + KK I+ V ++
Sbjct: 83 QVVKKEAVKKKVVEKRPEPIKQPKKVEPTKTVAKQETQPKAEPKKKIEPVKKDTVTQQTA 142
Query: 163 SKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINV 222
S + P ++ S +R + L++ G + + +
Sbjct: 143 SASQSKGATSQPILVDKPTFVSQPTQPRYPRSAQRRGIEGAALYEVWLDENGNQIKHVLL 202
Query: 223 DVVGGTELVRRMLRENARKAVIK 245
+ G L +A +A+ +
Sbjct: 203 ESSGA-----ESLDASALRAIKQ 220
>gi|298529521|ref|ZP_07016924.1| methyl-accepting chemotaxis sensory transducer [Desulfonatronospira
thiodismutans ASO3-1]
gi|298510957|gb|EFI34860.1| methyl-accepting chemotaxis sensory transducer [Desulfonatronospira
thiodismutans ASO3-1]
Length = 722
Score = 40.3 bits (92), Expect = 0.29, Method: Composition-based stats.
Identities = 30/221 (13%), Positives = 65/221 (29%)
Query: 20 LLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQ 79
+ F V + ++ S D + + + K + + +E ++
Sbjct: 357 ITGFASQVSAGNLEQKLQVDSRDEMQDLGHSLQKMVDNLKEKISEAEEKKEQARQETEKA 416
Query: 80 ENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQ 139
E +++ A + + + + G+ + + + S ++Q +
Sbjct: 417 EQFRSEAEEALEQARKAKREGMLQAAGQIEEVVERMTSASDELSAQVEQSSRGAEQQKQR 476
Query: 140 GISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRF 199
A V K S E S + R + + +V+ V A +
Sbjct: 477 TGETATAMEEMNATVLEVAKNASSAAESSDQARTKALEGADVVKQSVQAINRVQQQAGEM 536
Query: 200 KKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENAR 240
K + Q Q G ++ I L E AR
Sbjct: 537 KDSLAGLGKQSEQIGQIMNVIEDIADQTNLLALNAAIEAAR 577
>gi|54309712|ref|YP_130732.1| hypothetical protein PBPRA2551 [Photobacterium profundum SS9]
gi|46914150|emb|CAG20930.1| hypothetical tolA protein [Photobacterium profundum SS9]
Length = 347
Score = 40.3 bits (92), Expect = 0.29, Method: Composition-based stats.
Identities = 28/243 (11%), Positives = 72/243 (29%), Gaps = 12/243 (4%)
Query: 29 LLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQ 88
I+ + + + D + K+ + QE + ++ +
Sbjct: 115 ERKRINVEKRKAAEEKRKADEATKVAKQQAAKAEADRKQKQEAAQKAELTRQKKVEQQRK 174
Query: 89 TKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKS 148
+ + E R ++ +A + + + +A K + + + ++ +
Sbjct: 175 AEEATRKAEADRKAAEAERKAQVAAKEKAEAAARKAEVARKEAVRKAAEAKELQRQQEAA 234
Query: 149 IDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHF 208
++ + + + + AI + N + F + +
Sbjct: 235 LNDMFAGLETESEQRGGARGQFVADEVSRYGAIYTQMIQQNLLVDQSFFGKE---CILTM 291
Query: 209 QLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLS--PSTYKSWRNITLFF 266
+L+ G +L L A+ AV+K F + P + R+I L
Sbjct: 292 RLSANGLLLNA-------SEAGGDNRLCRAAKAAVVKVSQFPMPDDPQVVEKLRSIRLTV 344
Query: 267 VPS 269
P
Sbjct: 345 SPQ 347
>gi|113475252|ref|YP_721313.1| TonB family protein [Trichodesmium erythraeum IMS101]
gi|110166300|gb|ABG50840.1| TonB family protein [Trichodesmium erythraeum IMS101]
Length = 537
Score = 40.3 bits (92), Expect = 0.29, Method: Composition-based stats.
Identities = 16/200 (8%), Positives = 52/200 (26%), Gaps = 7/200 (3%)
Query: 49 YHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQ 108
+ E ++ + + + + S+ + T + +
Sbjct: 317 EAPIVTQLREGKTIKEIVQETQKEKVVATPKLSKAPKSEPVALTPKPSPTPEKAEEPKKD 376
Query: 109 ALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKS 168
+ D + + + + +KK + V + S
Sbjct: 377 LPSNNFEQLQQQKVTDASPLLQPQPEFKGSLLQKLRQKKLTNATVNEESQSRETSVDAAL 436
Query: 169 SRKRIPSQDAIAI---VRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVV 225
+ + + + I + + ++ + + + ++ G + + +
Sbjct: 437 AYANWAIELGVGKEISTHAKAIPDIYPEAACEQKLEGKALVGVLVDPDGSISKGPKLLIE 496
Query: 226 GGTELVRRMLRENARKAVIK 245
G +L A AV K
Sbjct: 497 SG----FPILDNAALDAVSK 512
>gi|292899598|ref|YP_003538967.1| TonB protein [Erwinia amylovora ATCC 49946]
gi|291199446|emb|CBJ46563.1| TonB protein [Erwinia amylovora ATCC 49946]
Length = 235
Score = 40.3 bits (92), Expect = 0.30, Method: Composition-based stats.
Identities = 28/221 (12%), Positives = 60/221 (27%), Gaps = 11/221 (4%)
Query: 7 LAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKK---IEEPVVQ 63
L S+ LH + + + Q + + +SV + E + EPV +
Sbjct: 16 LLGSIALHGAVIGAMLYASFHQAVEMPKASQPISVSMVAPETQPEPQAAPHDVAPEPVAK 75
Query: 64 FKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPY 123
+ + ++ + + + K A P +
Sbjct: 76 AEPVPEPVKTEPVAIPQPEPKPKPKPKKKEVVKPEPEVKPRPAAPLETRPAEQAKPSTAP 135
Query: 124 DKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVR 183
K + +R + + + SS + + A R
Sbjct: 136 KKSPTPSSALSSGPRALSVGKPSYPARAFALRIEGRVRVQFDVDSSGQVDNIRILSAEPR 195
Query: 184 N-------RVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVL 217
N + + W + K K L + + F+LN +
Sbjct: 196 NLFEREVKQAMRRWRYEAG-KPAKDLSMNIQFKLNGGSSIS 235
>gi|123351713|ref|XP_001295358.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121874116|gb|EAX82428.1| conserved hypothetical protein [Trichomonas vaginalis G3]
Length = 589
Score = 40.3 bits (92), Expect = 0.30, Method: Composition-based stats.
Identities = 13/151 (8%), Positives = 50/151 (33%)
Query: 31 VPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTK 90
+P+ + + Y +P + K + +E + S ++ ++ +
Sbjct: 282 LPMPVSQEPPKQLVQQLPKQYIPYVAPIKPPEKPKPAKKETKPKQKSEKKQTEKEENTKS 341
Query: 91 THATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSID 150
T+ + ++++ +K EQ+ + + +K + + + + K +
Sbjct: 342 KDQTKEKEQKTNETKPEQSNESTKENVEKTEEENKAMKDENLDVSKVNENKDLNGKTEEE 401
Query: 151 TVVVRPDKKELLSKVEKSSRKRIPSQDAIAI 181
+ + ++ + E ++
Sbjct: 402 NKAKKGENLDVSKENETKDLNGKTEEENKDK 432
>gi|117926782|ref|YP_867399.1| hypothetical protein Mmc1_3508 [Magnetococcus sp. MC-1]
gi|117610538|gb|ABK45993.1| protein of unknown function DUF610, YibQ [Magnetococcus sp. MC-1]
Length = 482
Score = 40.3 bits (92), Expect = 0.30, Method: Composition-based stats.
Identities = 20/162 (12%), Positives = 47/162 (29%), Gaps = 4/162 (2%)
Query: 14 HVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLV 73
H + L N P+ E ++ + + + EE + +
Sbjct: 52 HGIVTAALQLNARADSKSPVRGGEAEPIERVP----SNPDTGQAEERLGKAVKGEPTITP 107
Query: 74 RDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATN 133
+ + + + Q ++ E + + K + S + ++ K + A
Sbjct: 108 TEVPERAQPSQANTQGVAADSQVEEEADTVLKATPSEASSEPATKAATDLEQAKPTPAEL 167
Query: 134 KEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPS 175
+EQ I +K P + L+ + S
Sbjct: 168 EEQPSVEIEADGEKGGLGPSATPATQPLVPSETAKAHGDDKS 209
>gi|270004992|gb|EFA01440.1| hypothetical protein TcasGA2_TC030701 [Tribolium castaneum]
Length = 18024
Score = 40.3 bits (92), Expect = 0.30, Method: Composition-based stats.
Identities = 17/152 (11%), Positives = 42/152 (27%)
Query: 30 LVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQT 89
PI + E+ +VD + + + Q + + + V + + D+
Sbjct: 5339 SKPIPKEELETVDLKPVSLQKAKPTETDQLDSAQVEETKEIIKVEEKPDKLKVIEKKDEP 5398
Query: 90 KTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSI 149
+ T + + + ++ KE K E +K
Sbjct: 5399 VPWTQQPITLKKAPREPKEVPKEKVEEIQLKPTRRGSKPIPKEELETVDLKPVSLQKAKP 5458
Query: 150 DTVVVRPDKKELLSKVEKSSRKRIPSQDAIAI 181
V + +K + ++ I +
Sbjct: 5459 TETVQLDRAEVGETKEIITVDEKQEKLKEITL 5490
Score = 38.3 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 20/148 (13%), Positives = 42/148 (28%), Gaps = 2/148 (1%)
Query: 25 FNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENG-- 82
L PIS +++ V+ E K++ + + ++ Q+
Sbjct: 5253 LETVDLKPISLQKVKPVETDQLERAQVETTKELVKEKQEKPKVIEKKEEPVPWTQQPITL 5312
Query: 83 DRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGIS 142
+ + K E + + V + L
Sbjct: 5313 KKAPREPKEVPKEKVEEIQLKPTRRGSKPIPKEELETVDLKPVSLQKAKPTETDQLDSAQ 5372
Query: 143 FAEKKSIDTVVVRPDKKELLSKVEKSSR 170
E K I V +PDK +++ K ++
Sbjct: 5373 VEETKEIIKVEEKPDKLKVIEKKDEPVP 5400
Score = 38.3 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 11/142 (7%), Positives = 37/142 (26%), Gaps = 4/142 (2%)
Query: 40 SVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETK 99
SVD + + ++ Q + +E + + ++ K
Sbjct: 5195 SVDLVQD----QVPKEEPIPWNKQEIKLKPAPKEKKDIPKEKPEEVQLKPTRRDSKTIPK 5250
Query: 100 RSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKK 159
+ + + + + ++ ++ ++ Q +K + V
Sbjct: 5251 EELETVDLKPISLQKVKPVETDQLERAQVETTKELVKEKQEKPKVIEKKEEPVPWTQQPI 5310
Query: 160 ELLSKVEKSSRKRIPSQDAIAI 181
L + + I +
Sbjct: 5311 TLKKAPREPKEVPKEKVEEIQL 5332
>gi|269967691|ref|ZP_06181741.1| tolA protein [Vibrio alginolyticus 40B]
gi|269827778|gb|EEZ82062.1| tolA protein [Vibrio alginolyticus 40B]
Length = 354
Score = 40.3 bits (92), Expect = 0.30, Method: Composition-based stats.
Identities = 16/152 (10%), Positives = 58/152 (38%), Gaps = 1/152 (0%)
Query: 5 NGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQF 64
+AIS+ LH + + L + + + P +M+ + + + K+I + +
Sbjct: 13 KPIAISIGLHAILVAALLWGTDFNMSKPEPTGQMVQA-VVIDPKLVQQQAKEIRQQREKA 71
Query: 65 KGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYD 124
QE L + E ++ + + + +++ ++ + + + + +
Sbjct: 72 AKKEQERLDKLRREAEQLEKNRKAEEEQIRKLKEQQAKDAQAAREAEAARKKKEQERKQE 131
Query: 125 KQKISKATNKEQDLQGISFAEKKSIDTVVVRP 156
++++ K + L+ +++++
Sbjct: 132 EERVRKEKERAAKLEKERKEKEEAVRKAEQER 163
>gi|86135947|ref|ZP_01054526.1| hypothetical protein MED193_17529 [Roseobacter sp. MED193]
gi|85826821|gb|EAQ47017.1| hypothetical protein MED193_17529 [Roseobacter sp. MED193]
Length = 351
Score = 40.3 bits (92), Expect = 0.30, Method: Composition-based stats.
Identities = 23/213 (10%), Positives = 52/213 (24%), Gaps = 11/213 (5%)
Query: 25 FNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDR 84
+ P V+ + + + + S E V E
Sbjct: 125 LVAVVSEPDKVTPADPVETLAPAEQVEQTSSVEPVHITEAPPDSLEQRVEPQKATE---- 180
Query: 85 FSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFA 144
Q + T+ + L P +K + A + G A
Sbjct: 181 --PQPVEPQSPAITQSLRPPERPVDPPVQPLPEPPRRRVEKPTVRSAPTAQPRGNGQVNA 238
Query: 145 EKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRV 204
+ + P + + + + + + V R+ + +
Sbjct: 239 TRGEVQATRSAPGGQAVTNGGTDQVQGNAAASNYPGQVMRRIQRAKR-----RANVRGVA 293
Query: 205 KMHFQLNQKGFVLGKINVDVVGGTELVRRMLRE 237
+ F++ G + G G +L L +
Sbjct: 294 VVRFKVTASGGLAGLSIARSSGSGKLDGIALAQ 326
>gi|126736877|ref|ZP_01752612.1| TonB-like protein [Roseobacter sp. SK209-2-6]
gi|126721462|gb|EBA18165.1| TonB-like protein [Roseobacter sp. SK209-2-6]
Length = 366
Score = 40.3 bits (92), Expect = 0.31, Method: Composition-based stats.
Identities = 21/213 (9%), Positives = 51/213 (23%), Gaps = 11/213 (5%)
Query: 31 VPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTK 90
+P+S E + S+ + E + + + E+ V + + +
Sbjct: 134 LPVSAEESVVEGAGEVAILPVSQKVQQEPVLERSATIAAEDRVSEQVSVQQELQQPVPDP 193
Query: 91 THATEN------ETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFA 144
R E AL P K ++ + +
Sbjct: 194 AAQAPKVEQSLRPPTRPEPQPTRPQQAEQALAVQQPRPNPKPELLPKPVTKPRGNSVVNT 253
Query: 145 EKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRV 204
+ ++ + + + + V ++ K
Sbjct: 254 NRGVTESNRQAQGGQSQRQNGQARVQGNAAVSNYPGKVMRKIQRAKR-----PASVKGVA 308
Query: 205 KMHFQLNQKGFVLGKINVDVVGGTELVRRMLRE 237
+ F + G + G G +L L +
Sbjct: 309 VVSFSIGPGGSLAGVGIARSSGSGKLDSIALAQ 341
>gi|212710717|ref|ZP_03318845.1| hypothetical protein PROVALCAL_01784 [Providencia alcalifaciens DSM
30120]
gi|212686414|gb|EEB45942.1| hypothetical protein PROVALCAL_01784 [Providencia alcalifaciens DSM
30120]
Length = 245
Score = 40.3 bits (92), Expect = 0.31, Method: Composition-based stats.
Identities = 28/256 (10%), Positives = 73/256 (28%), Gaps = 29/256 (11%)
Query: 1 MRLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP 60
+RL +AIS+++H + FN P + + + +E
Sbjct: 4 IRLLVIVAISLLIHAGLAMAWIFN------QPKFPQPEEPISIAMLSFAEPASTPPVETQ 57
Query: 61 VVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPV 120
E ++ V E + + E K+ + ++ + + +
Sbjct: 58 SEPEPVVEPEPIIEPEPVVEPAIVLPQKKPVVKKKPEPKKEPKKEPKKIQEPVKPVEKQL 117
Query: 121 SPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIA 180
+ + + + + + + S+ S + S+ A
Sbjct: 118 AMNKTPATNTDILSKDTVN--------TRGAETTAKNNAPVSSQSSGSRGPKALSKQAPD 169
Query: 181 IVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENAR 240
+ K VK+ + ++ G V V+ + + +
Sbjct: 170 ----------YPDRARRLGKNGYVKVRYDIDDDGRVQNIEFVEASPKG-----LFERDVK 214
Query: 241 KAVIKSQAFRLSPSTY 256
+A+ + + +L Y
Sbjct: 215 RAMNRWKYEKLPAKGY 230
>gi|91227605|ref|ZP_01261909.1| TolA protein [Vibrio alginolyticus 12G01]
gi|91188498|gb|EAS74791.1| TolA protein [Vibrio alginolyticus 12G01]
Length = 354
Score = 40.3 bits (92), Expect = 0.31, Method: Composition-based stats.
Identities = 16/152 (10%), Positives = 58/152 (38%), Gaps = 1/152 (0%)
Query: 5 NGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQF 64
+AIS+ LH + + L + + + P +M+ + + + K+I + +
Sbjct: 13 KPIAISVGLHAILVAALLWGTDFNMSKPEPTGQMVQA-VVIDPKLVQQQAKEIRQQREKA 71
Query: 65 KGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYD 124
QE L + E ++ + + + +++ ++ + + + + +
Sbjct: 72 AKKEQERLDKLRREAEQLEKNRKAEEEQIRKLKEQQAKDAQAAREAEAARKKKEQERKQE 131
Query: 125 KQKISKATNKEQDLQGISFAEKKSIDTVVVRP 156
++++ K + L+ +++++
Sbjct: 132 EERVRKEKERAAKLEKERKEKEEAVRKAEQER 163
>gi|115350906|ref|YP_772745.1| TonB family protein [Burkholderia ambifaria AMMD]
gi|115280894|gb|ABI86411.1| TonB family protein [Burkholderia ambifaria AMMD]
Length = 167
Score = 40.3 bits (92), Expect = 0.31, Method: Composition-based stats.
Identities = 12/83 (14%), Positives = 26/83 (31%), Gaps = 11/83 (13%)
Query: 179 IAIVRNRVIANWNIPSDFKRFKKLR------VKMHFQLNQKGFVLGKINVDVVGGTELVR 232
+A R V + + + V + F +++ G ++ G +E
Sbjct: 54 LAQYRVEVARCVAEHNPSAVSRGPQAMLRSLVVVSFTVDRGGRLVNASVYRSNGDSEAEA 113
Query: 233 RMLRENARKAVIKSQAFRLSPST 255
L + +S + PS
Sbjct: 114 LALAS-----LRRSAPLPVPPSK 131
>gi|53720373|ref|YP_109359.1| TolA-related transport transmembrane protein [Burkholderia
pseudomallei K96243]
gi|53725624|ref|YP_103659.1| hypothetical protein BMA2080 [Burkholderia mallei ATCC 23344]
gi|67643925|ref|ZP_00442668.1| protein TolA [Burkholderia mallei GB8 horse 4]
gi|76808547|ref|YP_334627.1| TolA-related transport transmembrane protein [Burkholderia
pseudomallei 1710b]
gi|121599629|ref|YP_992168.1| TolA protein [Burkholderia mallei SAVP1]
gi|124385840|ref|YP_001028614.1| TolA protein [Burkholderia mallei NCTC 10229]
gi|126449592|ref|YP_001081485.1| TolA protein [Burkholderia mallei NCTC 10247]
gi|126452064|ref|YP_001067478.1| TolA protein [Burkholderia pseudomallei 1106a]
gi|134280541|ref|ZP_01767252.1| TolA protein [Burkholderia pseudomallei 305]
gi|166998275|ref|ZP_02264135.1| protein TolA [Burkholderia mallei PRL-20]
gi|167720989|ref|ZP_02404225.1| TolA protein [Burkholderia pseudomallei DM98]
gi|167739946|ref|ZP_02412720.1| TolA protein [Burkholderia pseudomallei 14]
gi|167817183|ref|ZP_02448863.1| TolA protein [Burkholderia pseudomallei 91]
gi|167825596|ref|ZP_02457067.1| TolA protein [Burkholderia pseudomallei 9]
gi|167847080|ref|ZP_02472588.1| TolA protein [Burkholderia pseudomallei B7210]
gi|167895664|ref|ZP_02483066.1| TolA protein [Burkholderia pseudomallei 7894]
gi|167904057|ref|ZP_02491262.1| TolA protein [Burkholderia pseudomallei NCTC 13177]
gi|167920271|ref|ZP_02507362.1| TolA protein [Burkholderia pseudomallei BCC215]
gi|226194295|ref|ZP_03789894.1| TolA protein [Burkholderia pseudomallei Pakistan 9]
gi|237813604|ref|YP_002898055.1| protein TolA [Burkholderia pseudomallei MSHR346]
gi|242316749|ref|ZP_04815765.1| TolA protein [Burkholderia pseudomallei 1106b]
gi|254175755|ref|ZP_04882415.1| TolA protein [Burkholderia mallei ATCC 10399]
gi|254180825|ref|ZP_04887423.1| TolA protein [Burkholderia pseudomallei 1655]
gi|254191663|ref|ZP_04898166.1| TolA protein [Burkholderia pseudomallei Pasteur 52237]
gi|254194977|ref|ZP_04901407.1| TolA protein [Burkholderia pseudomallei S13]
gi|254202356|ref|ZP_04908719.1| TolA protein [Burkholderia mallei FMH]
gi|254207690|ref|ZP_04914040.1| TolA protein [Burkholderia mallei JHU]
gi|254259302|ref|ZP_04950356.1| TolA protein [Burkholderia pseudomallei 1710a]
gi|254299064|ref|ZP_04966514.1| TolA protein [Burkholderia pseudomallei 406e]
gi|254356408|ref|ZP_04972684.1| TolA protein [Burkholderia mallei 2002721280]
gi|52210787|emb|CAH36771.1| possible TolA-related transport transmembrane protein [Burkholderia
pseudomallei K96243]
gi|52429047|gb|AAU49640.1| conserved hypothetical protein [Burkholderia mallei ATCC 23344]
gi|76578000|gb|ABA47475.1| possible TolA-related transport transmembrane protein [Burkholderia
pseudomallei 1710b]
gi|121228439|gb|ABM50957.1| TolA protein [Burkholderia mallei SAVP1]
gi|124293860|gb|ABN03129.1| protein TolA [Burkholderia mallei NCTC 10229]
gi|126225706|gb|ABN89246.1| TolA protein [Burkholderia pseudomallei 1106a]
gi|126242462|gb|ABO05555.1| protein TolA [Burkholderia mallei NCTC 10247]
gi|134248548|gb|EBA48631.1| TolA protein [Burkholderia pseudomallei 305]
gi|147746603|gb|EDK53680.1| TolA protein [Burkholderia mallei FMH]
gi|147751584|gb|EDK58651.1| TolA protein [Burkholderia mallei JHU]
gi|148025405|gb|EDK83559.1| TolA protein [Burkholderia mallei 2002721280]
gi|157808905|gb|EDO86075.1| TolA protein [Burkholderia pseudomallei 406e]
gi|157939334|gb|EDO95004.1| TolA protein [Burkholderia pseudomallei Pasteur 52237]
gi|160696799|gb|EDP86769.1| TolA protein [Burkholderia mallei ATCC 10399]
gi|169651726|gb|EDS84419.1| TolA protein [Burkholderia pseudomallei S13]
gi|184211364|gb|EDU08407.1| TolA protein [Burkholderia pseudomallei 1655]
gi|225933760|gb|EEH29748.1| TolA protein [Burkholderia pseudomallei Pakistan 9]
gi|237506692|gb|ACQ99010.1| protein TolA [Burkholderia pseudomallei MSHR346]
gi|238525394|gb|EEP88822.1| protein TolA [Burkholderia mallei GB8 horse 4]
gi|242139988|gb|EES26390.1| TolA protein [Burkholderia pseudomallei 1106b]
gi|243065355|gb|EES47541.1| protein TolA [Burkholderia mallei PRL-20]
gi|254217991|gb|EET07375.1| TolA protein [Burkholderia pseudomallei 1710a]
Length = 341
Score = 40.3 bits (92), Expect = 0.31, Method: Composition-based stats.
Identities = 28/212 (13%), Positives = 59/212 (27%), Gaps = 9/212 (4%)
Query: 59 EPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRM 118
E Q + + Q ++ + + + + ++ ++ K A K +
Sbjct: 139 EREKQKQAEKLKQQQLAEQQQRKLEQQKLEQQKLEQQKKQEQLAAQKKADAEKAEKAEKA 198
Query: 119 PVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDA 178
+ + + A K + A+ + I + S S S
Sbjct: 199 AKAAAAAKANAAAKAKLDKERQARLAQLQGIAGGGSGGGEGLAKSGTGTGSGGNAASPGY 258
Query: 179 IAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLREN 238
VR RV N L + + G VL G + +
Sbjct: 259 ADKVRRRVKPN---IVWAGERDSLVTVVAIRCTPSGDVLSTSIRRSSGNSGW-----DQA 310
Query: 239 ARKAVIKSQAFRLSPSTYKSWRNITLFFVPSK 270
A+ S + ++ IT+ F ++
Sbjct: 311 VISAIQASVPLP-PDTNGRTPSEITITFKAAE 341
>gi|291045225|ref|NP_596869.4| titin isoform N2-A [Homo sapiens]
Length = 33423
Score = 40.3 bits (92), Expect = 0.31, Method: Composition-based stats.
Identities = 3/77 (3%), Positives = 14/77 (18%)
Query: 49 YHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQ 108
+K ++ + V K + + + +
Sbjct: 10027 APPAKVPEVPKKPVPEKKVPVPAPKKVEAPPAKVPEVPKKLIPEEKKPTPVPKKVEAPPP 10086
Query: 109 ALKESALLRMPVSPYDK 125
+ + +
Sbjct: 10087 KVPKKREPVPVPVALPQ 10103
Score = 38.7 bits (88), Expect = 0.86, Method: Composition-based stats.
Identities = 10/116 (8%), Positives = 22/116 (18%)
Query: 29 LLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQ 88
VP E + V E +K ++ + V + + + +
Sbjct: 9979 PEVPKKPEEKVPVLIPKKEKPPPAKVPEVPKKPVPEEKVPVPVPKKVEAPPAKVPEVPKK 10038
Query: 89 TKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFA 144
+ E +P K +
Sbjct: 10039 PVPEKKVPVPAPKKVEAPPAKVPEVPKKLIPEEKKPTPVPKKVEAPPPKVPKKREP 10094
>gi|225131084|gb|ACN81321.1| titin [Homo sapiens]
Length = 33423
Score = 40.3 bits (92), Expect = 0.31, Method: Composition-based stats.
Identities = 3/77 (3%), Positives = 14/77 (18%)
Query: 49 YHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQ 108
+K ++ + V K + + + +
Sbjct: 10027 APPAKVPEVPKKPVPEKKVPVPAPKKVEAPPAKVPEVPKKLIPEEKKPTPVPKKVEAPPP 10086
Query: 109 ALKESALLRMPVSPYDK 125
+ + +
Sbjct: 10087 KVPKKREPVPVPVALPQ 10103
Score = 38.7 bits (88), Expect = 0.86, Method: Composition-based stats.
Identities = 10/116 (8%), Positives = 22/116 (18%)
Query: 29 LLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQ 88
VP E + V E +K ++ + V + + + +
Sbjct: 9979 PEVPKKPEEKVPVLIPKKEKPPPAKVPEVPKKPVPEEKVPVPVPKKVEAPPAKVPEVPKK 10038
Query: 89 TKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFA 144
+ E +P K +
Sbjct: 10039 PVPEKKVPVPAPKKVEAPPAKVPEVPKKLIPEEKKPTPVPKKVEAPPPKVPKKREP 10094
>gi|217420847|ref|ZP_03452352.1| TolA protein [Burkholderia pseudomallei 576]
gi|217396259|gb|EEC36276.1| TolA protein [Burkholderia pseudomallei 576]
Length = 341
Score = 40.3 bits (92), Expect = 0.32, Method: Composition-based stats.
Identities = 28/212 (13%), Positives = 59/212 (27%), Gaps = 9/212 (4%)
Query: 59 EPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRM 118
E Q + + Q ++ + + + + ++ ++ K A K +
Sbjct: 139 EREKQKQAEKLKQQQLAEQQQRKLEQQKLEQQKLEQQKKQEQLAAQKKADAEKAEKAEKA 198
Query: 119 PVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDA 178
+ + + A K + A+ + I + S S S
Sbjct: 199 AKAAAAAKANAAAKAKLDKERQARLAQLQGIAGGGSGGGEGLAKSGTGTGSGGNAASPGY 258
Query: 179 IAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLREN 238
VR RV N L + + G VL G + +
Sbjct: 259 ADKVRRRVKPN---IVWAGERDSLVTVVAIRCTPSGDVLSTSIRRSSGNSGW-----DQA 310
Query: 239 ARKAVIKSQAFRLSPSTYKSWRNITLFFVPSK 270
A+ S + ++ IT+ F ++
Sbjct: 311 VISAIQASVPLP-PDTNGRTPSEITITFKAAE 341
>gi|108861911|sp|Q8WZ42|TITIN_HUMAN RecName: Full=Titin; AltName: Full=Connectin; AltName:
Full=Rhabdomyosarcoma antigen MU-RMS-40.14
Length = 34350
Score = 40.3 bits (92), Expect = 0.32, Method: Composition-based stats.
Identities = 3/77 (3%), Positives = 14/77 (18%)
Query: 49 YHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQ 108
+K ++ + V K + + + +
Sbjct: 10954 APPAKVPEVPKKPVPEKKVPVPAPKKVEAPPAKVPEVPKKLIPEEKKPTPVPKKVEAPPP 11013
Query: 109 ALKESALLRMPVSPYDK 125
+ + +
Sbjct: 11014 KVPKKREPVPVPVALPQ 11030
Score = 38.7 bits (88), Expect = 0.88, Method: Composition-based stats.
Identities = 10/116 (8%), Positives = 22/116 (18%)
Query: 29 LLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQ 88
VP E + V E +K ++ + V + + + +
Sbjct: 10906 PEVPKKPEEKVPVLIPKKEKPPPAKVPEVPKKPVPEEKVPVPVPKKVEAPPAKVPEVPKK 10965
Query: 89 TKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFA 144
+ E +P K +
Sbjct: 10966 PVPEKKVPVPAPKKVEAPPAKVPEVPKKLIPEEKKPTPVPKKVEAPPPKVPKKREP 11021
>gi|17066105|emb|CAD12456.1| Titin [Homo sapiens]
Length = 34350
Score = 40.3 bits (92), Expect = 0.32, Method: Composition-based stats.
Identities = 3/77 (3%), Positives = 14/77 (18%)
Query: 49 YHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQ 108
+K ++ + V K + + + +
Sbjct: 10954 APPAKVPEVPKKPVPEKKVPVPAPKKVEAPPAKVPEVPKKLIPEEKKPTPVPKKVEAPPP 11013
Query: 109 ALKESALLRMPVSPYDK 125
+ + +
Sbjct: 11014 KVPKKREPVPVPVALPQ 11030
Score = 38.7 bits (88), Expect = 0.88, Method: Composition-based stats.
Identities = 10/116 (8%), Positives = 22/116 (18%)
Query: 29 LLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQ 88
VP E + V E +K ++ + V + + + +
Sbjct: 10906 PEVPKKPEEKVPVLIPKKEKPPPAKVPEVPKKPVPEEKVPVPVPKKVEAPPAKVPEVPKK 10965
Query: 89 TKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFA 144
+ E +P K +
Sbjct: 10966 PVPEKKVPVPAPKKVEAPPAKVPEVPKKLIPEEKKPTPVPKKVEAPPPKVPKKREP 11021
>gi|223038885|ref|ZP_03609177.1| putative TonB family C- domain protein [Campylobacter rectus
RM3267]
gi|222879858|gb|EEF14947.1| putative TonB family C- domain protein [Campylobacter rectus
RM3267]
Length = 285
Score = 40.3 bits (92), Expect = 0.32, Method: Composition-based stats.
Identities = 33/282 (11%), Positives = 80/282 (28%), Gaps = 21/282 (7%)
Query: 1 MRLENGLAISMILHVMFLLLLYFNF-----NVQLLVPISRREMLSVDNIYNED-YHSSKY 54
+ L IS +H + + + + N + R + D S+
Sbjct: 6 LNLVFAFLISSCIHALAIGFVVYTIFGNDDNTNISKDKGERLAFGISFAQISDINTDSEA 65
Query: 55 KKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESA 114
+ + + + + D+ + + E + K+ K ++ +K+
Sbjct: 66 AAKSQEISNTTEDLRPPVEEVYEEVVFEDKLEEIIEQKVDEEQFKQDIKPKPKEKIKKPE 125
Query: 115 LLRMPVSPYDKQKI------SKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKS 168
+ +K +K + SFA+ + + D +
Sbjct: 126 KKKPVKPEKIVEKKHICENCAKPEKTADETTEKSFAKSSAGSNMQADNDVNAIGGSKSSG 185
Query: 169 SRKRIPSQ--DAIAIVRNRVIANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKINVDVV 225
S + + + + P K + RV + F+ + +
Sbjct: 186 SAINEQVGGSNLSGEIYAALKKHMTYPKRALERKIEGRVVLEFRQIDEKKFEYIKVTESS 245
Query: 226 GGTELVRRMLRENARKAVIKSQAFRLSPSTYKSWRNITLFFV 267
G R+L +A K V + L ++ + + F
Sbjct: 246 G-----YRILDMHAIKIVNSAAR-SLPKESHNLVITVPISFD 281
>gi|115525470|ref|YP_782381.1| TonB family protein [Rhodopseudomonas palustris BisA53]
gi|115519417|gb|ABJ07401.1| TonB family protein [Rhodopseudomonas palustris BisA53]
Length = 247
Score = 40.3 bits (92), Expect = 0.32, Method: Composition-based stats.
Identities = 17/149 (11%), Positives = 46/149 (30%), Gaps = 6/149 (4%)
Query: 101 SSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKE 160
S + + ++ + +N+ + A ++ + + P
Sbjct: 81 PSPAPPTVPVLATSQSLTENVVSSADEPLAESNRPNSDVRRTAALARAFEPAELPPTSVA 140
Query: 161 LLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGK 219
+ + + + + V PS + + +V F + + G VLG
Sbjct: 141 AMPAQVVNGPPNVAAIKFQQALLQHVARYQRYPSTGVGRRLEGKVDAQFSMARDGTVLGA 200
Query: 220 INVDVVGGTELVRRMLRENARKAVIKSQA 248
G +++L + A + ++Q
Sbjct: 201 WVKTSSG-----QQLLDKEALDTIRRAQP 224
>gi|260886999|ref|ZP_05898262.1| TonB protein [Selenomonas sputigena ATCC 35185]
gi|330839217|ref|YP_004413797.1| TonB family protein [Selenomonas sputigena ATCC 35185]
gi|260863061|gb|EEX77561.1| TonB protein [Selenomonas sputigena ATCC 35185]
gi|329746981|gb|AEC00338.1| TonB family protein [Selenomonas sputigena ATCC 35185]
Length = 241
Score = 40.3 bits (92), Expect = 0.32, Method: Composition-based stats.
Identities = 24/239 (10%), Positives = 66/239 (27%), Gaps = 31/239 (12%)
Query: 4 ENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQ 63
L S+ +H++ + + + + + V IY+E P V+
Sbjct: 8 YKALLASLGVHLIIFFIAAAVGVFSMATMKEKSDNVEV-VIYDEAQDEGSEGGGSPPQVE 66
Query: 64 FKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPY 123
+ E ++ D ++ + +++ + + E + +
Sbjct: 67 AAPAVDEVVIPDKTLPPIDQKPPEESDKPSQKREARAGNP-------------------- 106
Query: 124 DKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVR 183
+ + + GI + + E + P + A +R
Sbjct: 107 ----LGQGGEGKGVGTGIGDGKGPGTGGTGTGVSQSEPPPEPPPPPPPPPPKERIEASLR 162
Query: 184 NRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKA 242
+ ++ + + V + + G + + G E + A A
Sbjct: 163 SEARPDYPPDLIEEDVEG-SVTIKIFVASDGSIEDVAVISSSGYAE-----MDSAAVAA 215
>gi|254447447|ref|ZP_05060913.1| TonB protein [gamma proteobacterium HTCC5015]
gi|198262790|gb|EDY87069.1| TonB protein [gamma proteobacterium HTCC5015]
Length = 222
Score = 40.3 bits (92), Expect = 0.32, Method: Composition-based stats.
Identities = 19/178 (10%), Positives = 48/178 (26%), Gaps = 8/178 (4%)
Query: 80 ENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQ--KISKATNKEQD 137
E+ + A E + ++ E + P + + +
Sbjct: 32 ESSQKTPQVAPPQAAVIEINMAPPAQPEPKPEPKPEPLPTAPPEHDAVLPEPEPQPEPEP 91
Query: 138 LQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFK 197
+ + P + E + V + + D + + + P +
Sbjct: 92 EEKEPEPQPVEEPPPPSEPVQSETIEGVSQPQHQVDAIVDWQGRLLIHLENHKRYPRLAR 151
Query: 198 RFK-KLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPS 254
R + + F ++++G V G R L + + ++Q P
Sbjct: 152 RRHYEGTAIVSFTIDRQGRVSNAALKTSSG-----HRSLDRETLELLERAQPLPKPPE 204
>gi|260551456|ref|ZP_05825640.1| LOW QUALITY PROTEIN: tonB [Acinetobacter sp. RUH2624]
gi|260405450|gb|EEW98943.1| LOW QUALITY PROTEIN: tonB [Acinetobacter sp. RUH2624]
Length = 74
Score = 40.3 bits (92), Expect = 0.33, Method: Composition-based stats.
Identities = 15/82 (18%), Positives = 29/82 (35%), Gaps = 10/82 (12%)
Query: 190 WNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAF 249
W++P+ V + F L+ G V + G L + + A+ S +
Sbjct: 1 WDVPTGSSGK---TVSVRFTLSDSGSVSSIVITRSSGDD-----ALDASIKAAIQASAPY 52
Query: 250 RLS--PSTYKSWRNITLFFVPS 269
+ P + R++T F
Sbjct: 53 PMPSDPDARREARSVTSTFRAQ 74
>gi|213970704|ref|ZP_03398829.1| tonB protein [Pseudomonas syringae pv. tomato T1]
gi|213924538|gb|EEB58108.1| tonB protein [Pseudomonas syringae pv. tomato T1]
Length = 171
Score = 40.3 bits (92), Expect = 0.33, Method: Composition-based stats.
Identities = 16/154 (10%), Positives = 39/154 (25%), Gaps = 6/154 (3%)
Query: 102 SSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKEL 161
+ ++ Q E + + + +P+K
Sbjct: 2 PEVAQAPKPEIVVPKKVEKPKPKPQPPKPQKKPEPPQEKPADEKPVDTPPSTAKPEKSAA 61
Query: 162 LSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKI 220
+ S + + + P D +R + ++ F ++ G VL
Sbjct: 62 PAPAPTPSPPSTALPSWQGDLLSHLGKYKKYPEDARRRGMQGVARLRFVVDADGNVLSYS 121
Query: 221 NVDVVGGTELVRRMLRENARKAVIKSQAFRLSPS 254
+ G L + + ++Q P
Sbjct: 122 IANSSGS-----PALDRATMEMIRRAQPLPKPPK 150
>gi|322494609|emb|CBZ29911.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 963
Score = 40.3 bits (92), Expect = 0.33, Method: Composition-based stats.
Identities = 21/204 (10%), Positives = 47/204 (23%), Gaps = 7/204 (3%)
Query: 44 IYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSS 103
+ D S++ + P + V + + + A+ ++
Sbjct: 686 VEEGDTPSTEPAERLPPRSTRTRTRASPAVPETAPAPAVVKKGPMKVQAASASDIATPQP 745
Query: 104 SKGEQALKESALLRMPVSPYDKQKIS------KATNKEQDLQGISFAEKKSIDTVVVRPD 157
+ + +P + Q + P
Sbjct: 746 VEESTPARTRKKPPHEAAPRASEHQQGLAYEAAQQQPPQPALVAPRKRGRPPQQGPEEPS 805
Query: 158 KKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVL 217
+ + + A +R R N+P ++ K +L G V
Sbjct: 806 RPVAPGSQATTEAAGGVTGVDTASLRRRRQRCENVPVKEEKTVKSSAATATKLEAVGEVA 865
Query: 218 GKINVDVVGGTELVRRMLRENARK 241
G R +AR+
Sbjct: 866 SSPAS-PPRGRPHGRPSGSGSARR 888
>gi|50120211|ref|YP_049378.1| TonB-like protein [Pectobacterium atrosepticum SCRI1043]
gi|49610737|emb|CAG74182.1| TonB-like protein [Pectobacterium atrosepticum SCRI1043]
Length = 292
Score = 40.3 bits (92), Expect = 0.33, Method: Composition-based stats.
Identities = 22/166 (13%), Positives = 46/166 (27%), Gaps = 7/166 (4%)
Query: 87 DQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEK 146
+Q + K + + + + PV P K + + + A +
Sbjct: 112 EQGEREIAPVPEKPVVEEQQTPPPVKKEVHQPPVKPVVKPQPIRPKTTAERQPAARPAPE 171
Query: 147 KSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKM 206
S P SK +A V V + ++ V +
Sbjct: 172 PSHTAPEATPGTLTTASKGNLMQNSPGAQPKQVASVGCVVPQPDYPRRAKRLQQEGNVLV 231
Query: 207 HFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAV--IKSQAFR 250
++ +G ++ G L + A +AV + +R
Sbjct: 232 RLVISPEGRLIRHDIARSSG-----YDALDQAAIEAVAQARCTPYR 272
>gi|169778835|ref|XP_001823882.1| ubiquitin carboxyl-terminal hydrolase 6 [Aspergillus oryzae RIB40]
gi|83772621|dbj|BAE62749.1| unnamed protein product [Aspergillus oryzae]
Length = 572
Score = 40.3 bits (92), Expect = 0.34, Method: Composition-based stats.
Identities = 28/208 (13%), Positives = 57/208 (27%), Gaps = 11/208 (5%)
Query: 23 FNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENG 82
F +L + L + I D K+ + K + + E
Sbjct: 359 VTFPAELDAVDFCTDELKKELIPIRDKVREIRKEELDVERARKRQKLDRQRDEEKKTEAE 418
Query: 83 DRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGIS 142
+ + E K +S + + + + Y+ +K + +++L +
Sbjct: 419 PEPLEPMQKKKAAEERKDASKATEKDGDSAMTDVFKSDAEYEAEKAASILAAKKELSELI 478
Query: 143 FAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKL 202
K D + EL + S A V+ + N + F
Sbjct: 479 DP-KLRSDEGTNKSGLYELRGVITHQGASAD-SGHYTAYVKKQAQGNKEEDGKWWWFNDE 536
Query: 203 RVKMHFQLNQKGFVLGKINVDVVGGTEL 230
+V V + + GG E
Sbjct: 537 KVT---------EVEAEKIETLSGGGES 555
>gi|238895242|ref|YP_002919977.1| transport protein TonB [Klebsiella pneumoniae NTUH-K2044]
gi|155968623|dbj|BAF75782.1| TonB protein [Klebsiella pneumoniae NTUH-K2044]
gi|238547559|dbj|BAH63910.1| energy transducer [Klebsiella pneumoniae subsp. pneumoniae
NTUH-K2044]
Length = 262
Score = 39.9 bits (91), Expect = 0.34, Method: Composition-based stats.
Identities = 27/234 (11%), Positives = 62/234 (26%), Gaps = 29/234 (12%)
Query: 8 AISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGS 67
+S+ +H + L + Q++ S + + + + D + V
Sbjct: 31 LLSVAIHGAVVAGLLYTSVHQVIEQPSPTQPIEITMVAPADLEPPPAAQPVVEPVVEPEP 90
Query: 68 SQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQK 127
E V +E + + K K EQ +E P +
Sbjct: 91 EPEPEVAPEPPKEAPVVIHKPEPKPKPKPKPKPKPEKKVEQPKREVKPAAEPRPASPFEN 150
Query: 128 ISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVI 187
+ A + + A+ R + S ++ RI
Sbjct: 151 NNTAPARTAPSTSTAAAKPTVTAPSGPRAISRVQPSYPARAQALRI-------------- 196
Query: 188 ANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARK 241
+ V++ F ++ G + + R + ++A +
Sbjct: 197 -------------EGTVRVKFDVSPDGRIDNLQILSAQPANMFEREV--KSAMR 235
>gi|88597662|ref|ZP_01100895.1| TonB domain protein [Campylobacter jejuni subsp. jejuni 84-25]
gi|88189966|gb|EAQ93942.1| TonB domain protein [Campylobacter jejuni subsp. jejuni 84-25]
Length = 251
Score = 39.9 bits (91), Expect = 0.34, Method: Composition-based stats.
Identities = 21/223 (9%), Positives = 68/223 (30%), Gaps = 16/223 (7%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
+++ +++ ++L++F + + +I + + ++ + Q
Sbjct: 11 SFLLALAIYISIVILVFF------RLVSEVEPAIQYTDIKDSFVDIELAEPSKQVITQSN 64
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
+ + E + + + K S+ ++ +KE +
Sbjct: 65 TPKEIQKPTEQIDIEKLFAQTTNKTVKTEDIDQKASNFNELFGNIKEIQEEKTTKIQSSA 124
Query: 126 QKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNR 185
+ + K Q + + + + ++K + + V
Sbjct: 125 KSGISSAPKPQASELVKQLNDSLLQE-------ESSTQGESTKAQKIGIYDEFLGKVVRI 177
Query: 186 VIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGT 228
+ W +K+ VK+ +++ G G +V+ G
Sbjct: 178 ITQRWTQYY--PNSEKISVKVKIFIDENGKF-GYTSVEKSGNP 217
>gi|218549688|ref|YP_002383479.1| TolA protein [Escherichia fergusonii ATCC 35469]
gi|218357229|emb|CAQ89864.1| TolA protein [Escherichia fergusonii ATCC 35469]
Length = 403
Score = 39.9 bits (91), Expect = 0.34, Method: Composition-based stats.
Identities = 12/158 (7%), Positives = 38/158 (24%), Gaps = 4/158 (2%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPV 61
+L+ + IS +LHV+ L + +
Sbjct: 10 KLKRAIIISAVLHVILFAALI----WSSFDENIEASAGGGGGSSIDAVMVDTGAVVANSE 65
Query: 62 VQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVS 121
+ + + ++ + + A E E + + + A ++
Sbjct: 66 RIKEQEASARRSEEQRKKKEQQAAEELRERQAAEQERLKQAEKERIAAQQQKKQAEEDAK 125
Query: 122 PYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKK 159
+ ++ ++ + + K
Sbjct: 126 QAELKRQQAEEAMKKAEAQKKAEAEAAKLAEAEAQKKA 163
>gi|297569527|ref|YP_003690871.1| TonB family protein [Desulfurivibrio alkaliphilus AHT2]
gi|296925442|gb|ADH86252.1| TonB family protein [Desulfurivibrio alkaliphilus AHT2]
Length = 253
Score = 39.9 bits (91), Expect = 0.34, Method: Composition-based stats.
Identities = 24/238 (10%), Positives = 56/238 (23%), Gaps = 22/238 (9%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
L ++++ H + +++ + P +++ + E +
Sbjct: 10 ALFLALLGHALLFWWGS-DWSWRASPPPEGKQL----ALQLALSTGPPAALPPETPAAPE 64
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
++ + T E + + + E + P P DK
Sbjct: 65 PATPSRPEPPPEPEAIPVPQPPPAPTPEPEPVPEPKPAPEPEAKTAPEDSKKPPEPPLDK 124
Query: 126 QKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNR 185
K + E R
Sbjct: 125 AKPVAKETAAASPAPAPLTSAAEAAGATAKQQSTAAGPITEARPLYRENPPPP------- 177
Query: 186 VIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAV 243
+ +R + V + +N++G V + G +L + A AV
Sbjct: 178 -----YPRAAQRRHHQGTVILEVLVNRQGRVEELQVAESSG-----YPLLDQAALAAV 225
>gi|32265932|ref|NP_859964.1| hypothetical protein HH0433 [Helicobacter hepaticus ATCC 51449]
gi|32261981|gb|AAP77030.1| conserved hypothetical protein [Helicobacter hepaticus ATCC 51449]
Length = 230
Score = 39.9 bits (91), Expect = 0.34, Method: Composition-based stats.
Identities = 21/198 (10%), Positives = 59/198 (29%), Gaps = 14/198 (7%)
Query: 74 RDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATN 133
++ ++ N T + TK SS+ A + + + + + +
Sbjct: 40 KESAISLNAISIEAIIDDKPTPSITKNPSSTNNPLAGSGIKDIFDKIDSNELSQNTPIGD 99
Query: 134 KEQDLQGISFAEKKSIDTVVVRPDKKELLSKV-----EKSSRKRIPSQDAIAIVRNRVIA 188
++ + +K + + +L + S++ + A + +
Sbjct: 100 NRDKVEQNAKEQKIKDLQSTAQELQNKLNTLSNLTISTNSTQSDGEYDEWYAQIEKIIHQ 159
Query: 189 NWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQA 248
W + K++ +H ++ G V V ++ + + +
Sbjct: 160 KWQQTFYIED--KMQALVHIRIADNG-VFSYKIVKYSSNV-----AFDDSLKTMLEECTQ 211
Query: 249 FRLSPSTYKSWRNITLFF 266
P + R I + F
Sbjct: 212 MHFPPHPKGT-REIAITF 228
>gi|115523834|ref|YP_780745.1| hypothetical protein RPE_1817 [Rhodopseudomonas palustris BisA53]
gi|115517781|gb|ABJ05765.1| conserved hypothetical protein [Rhodopseudomonas palustris BisA53]
Length = 862
Score = 39.9 bits (91), Expect = 0.34, Method: Composition-based stats.
Identities = 26/228 (11%), Positives = 64/228 (28%), Gaps = 5/228 (2%)
Query: 17 FLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDF 76
L L+F+FN L + + ++ + + + P V+ + L +
Sbjct: 468 LLYFLHFDFNPINLRNPKVESIATFLDLRKDPNTGANAINVMAPSVEAAREVEAKLAKLP 527
Query: 77 SVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQ 136
VQ + + + R + E AL + +P D++ I+ + E
Sbjct: 528 QVQRTMSLETFVPTDQEAKLKLIRDGAKVLEPALN---PESVDPAPTDEENIAALQSTEA 584
Query: 137 DLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDF 196
+L+ ++ + R + + + ++ + +
Sbjct: 585 NLRRVAGDAQGPGAQTSRRLADAIGKLIKADQATREKVQAVFVTPLQIALSQLRSTLQAA 644
Query: 197 KRFKKLRVKMHFQL--NQKGFVLGKINVDVVGGTELVRRMLRENARKA 242
+ + G V + R + KA
Sbjct: 645 PVTLDNLPDGLVSMWKTKDGQVRVEALPRGDPNDNDTLRAFADAVLKA 692
>gi|316935647|ref|YP_004110629.1| PAS/PAC sensor signal transduction histidine kinase
[Rhodopseudomonas palustris DX-1]
gi|315603361|gb|ADU45896.1| PAS/PAC sensor signal transduction histidine kinase
[Rhodopseudomonas palustris DX-1]
Length = 1195
Score = 39.9 bits (91), Expect = 0.35, Method: Composition-based stats.
Identities = 15/202 (7%), Positives = 41/202 (20%), Gaps = 3/202 (1%)
Query: 40 SVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETK 99
+ D + + P Q +
Sbjct: 330 PAEFTLLGDVAPAVEVRPAPPEPQVDEVDTNAPQSQPADPVEEPAAEVVPTDEPVAPGPI 389
Query: 100 RSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKK 159
S E E A + + + A + + + ++DT+ P +
Sbjct: 390 GEPSPYIEAVADEPASPQAAENEHRPATEQSAAPEPAAAEPSATEAPSAVDTMPEPPAPR 449
Query: 160 ELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGK 219
+ + A + + + + + L+ V
Sbjct: 450 RHPLRFVWQIDRDGRLAIASDEFLRLIGPHTAANLGERWSE---AAVRLGLDPDHRVTAA 506
Query: 220 INVDVVGGTELVRRMLRENARK 241
+ ++ A +
Sbjct: 507 LATRHTWSGITLQWPADGTALR 528
>gi|198450134|ref|XP_002137035.1| GA26805 [Drosophila pseudoobscura pseudoobscura]
gi|198130906|gb|EDY67593.1| GA26805 [Drosophila pseudoobscura pseudoobscura]
Length = 1069
Score = 39.9 bits (91), Expect = 0.35, Method: Composition-based stats.
Identities = 10/118 (8%), Positives = 40/118 (33%)
Query: 31 VPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTK 90
P ++ E+ + + +E+ + + ++ + + + N TK
Sbjct: 193 PPPTKPEINDAEEVSDEELPAPQRAELPADAEVISEDELPSNNNNNNNNNNAGEPKTSTK 252
Query: 91 THATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKS 148
A + + + + + +++ + ++ V Y+ + +N + +
Sbjct: 253 RKAEKEQAEEAKDNAEQKSSEAASTREKSVEQYNPGSPTTESNDAPPSEKRPKVDDAE 310
>gi|189426517|ref|YP_001953694.1| TonB family protein [Geobacter lovleyi SZ]
gi|189422776|gb|ACD97174.1| TonB family protein [Geobacter lovleyi SZ]
Length = 245
Score = 39.9 bits (91), Expect = 0.35, Method: Composition-based stats.
Identities = 24/267 (8%), Positives = 60/267 (22%), Gaps = 38/267 (14%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
L A+S+ + + + VD + +
Sbjct: 12 LGVTTALSVAF-HAAAFAFLVWWQQMIPGQGPVQTTYYVDIVNLPVADPRAGSPTQTGNE 70
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
+ S SP
Sbjct: 71 EKSAPPPPAPPVMTSPAAPTKPVPG------------------------------KRPSP 100
Query: 123 YDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIV 182
+ + + L+G A++++ +R D A +
Sbjct: 101 APVAESAAFQERMAKLEGKVDAQRQAAAFETLRKKVAARGRVGMPRGTGTEAGSDYTAYL 160
Query: 183 RNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKA 242
+R+ + F + K V + ++ G ++ G ++ + +A
Sbjct: 161 HSRLKDAFRETISF-QSKNPFVMVRLTIDGDGRIIRTRFEKSSGD-----KVFELSVTRA 214
Query: 243 VIKSQAFRLSPSTYKSWRNITLFFVPS 269
+ ++ + P + F P
Sbjct: 215 ITLAEQTIVPPPGRTVF-EGAFVFKPQ 240
>gi|200391024|ref|ZP_03217635.1| protein TonB [Salmonella enterica subsp. enterica serovar Virchow
str. SL491]
gi|199603469|gb|EDZ02015.1| protein TonB [Salmonella enterica subsp. enterica serovar Virchow
str. SL491]
gi|267993682|gb|ACY88567.1| transport protein TonB [Salmonella enterica subsp. enterica serovar
Typhimurium str. 14028S]
Length = 283
Score = 39.9 bits (91), Expect = 0.36, Method: Composition-based stats.
Identities = 25/230 (10%), Positives = 60/230 (26%), Gaps = 21/230 (9%)
Query: 8 AISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGS 67
+S+ +H + L + Q++ + + ++V + D + + V
Sbjct: 55 LLSVGIHGAVVAGLLYTSVHQVIELPAPAQPITVTMVSPADLEPPQAVQPPPEPVVEPEP 114
Query: 68 SQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQK 127
E +E + + K + + + P SP++
Sbjct: 115 EPEPEPIPEPPKEAPVVIEKPKPKPKPKPKPKPVKKVEEQPKREVKPAAPRPASPFENSA 174
Query: 128 ISKATNKEQDLQGISF-----------------AEKKSIDTVVVRPDKKELLSKVEKSSR 170
+ T+ + + R K ++ +
Sbjct: 175 PVRPTSSTASATSKPAVSVPTGPRALSRNQPQYPARAQALRIEGRVKVKFDVTSAGRVEN 234
Query: 171 KRIPSQDAIAIVRNRVI---ANWNIPSDFKRFKKLRVKMHFQLNQKGFVL 217
+I S + V W + L V + F+LN +
Sbjct: 235 VQILSAQPANMFEREVKNAMRKWRYEAGKPGS-GLVVNIIFRLNGTAQIE 283
>gi|238499409|ref|XP_002380939.1| ubiquitin C-terminal hydrolase, putative [Aspergillus flavus
NRRL3357]
gi|220692692|gb|EED49038.1| ubiquitin C-terminal hydrolase, putative [Aspergillus flavus
NRRL3357]
Length = 572
Score = 39.9 bits (91), Expect = 0.36, Method: Composition-based stats.
Identities = 28/208 (13%), Positives = 58/208 (27%), Gaps = 11/208 (5%)
Query: 23 FNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENG 82
F +L + L + I D K+ + K ++ + E
Sbjct: 359 VTFPAELDAVDFCTDELKKELIPIRDKVREIRKEELDVERARKRQKLDHQRDEEKKTEAE 418
Query: 83 DRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGIS 142
+ + E K +S + + + + Y+ +K + +++L +
Sbjct: 419 PEPLEPMQKKKAAEERKDASKATEKDGDSAMTDVFKSDAEYEAEKAASILAAKKELSELI 478
Query: 143 FAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKL 202
K D + EL + S A V+ + N + F
Sbjct: 479 DP-KLRSDEGTNKSGLYELRGVITHQGASAD-SGHYTAYVKKQAQGNKEEDGKWWWFNDE 536
Query: 203 RVKMHFQLNQKGFVLGKINVDVVGGTEL 230
+V V + + GG E
Sbjct: 537 KVT---------EVEAEKIETLSGGGES 555
>gi|134096412|ref|YP_001101487.1| hypothetical protein HEAR3259 [Herminiimonas arsenicoxydans]
gi|133740315|emb|CAL63366.1| Hypothetical protein HEAR3259 [Herminiimonas arsenicoxydans]
Length = 258
Score = 39.9 bits (91), Expect = 0.36, Method: Composition-based stats.
Identities = 25/224 (11%), Positives = 61/224 (27%), Gaps = 18/224 (8%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVP-ISRREMLSVDNIYNEDYHSSKYKKIEEP 60
R G+ +S+++H + L V++ S L+V+ I + P
Sbjct: 4 RTAIGIGLSLLIHALILFFAMDRAEVRVAETGESPTAPLTVNLIAQAPSPKVAAATLAPP 63
Query: 61 VVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPV 120
Q+ + ++ G ++ +S++ + +L
Sbjct: 64 -------PQKTDSTKPAHKKAGSAKTEPATRAKPPPPPSPTSTATALLPPDMTDMLNAAR 116
Query: 121 SPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIA 180
+ I + N + + +I + + + S +
Sbjct: 117 ARRRAAGIQEPDNSVSQPADDNAIARANIAELTQQQSRGRNESGGVFQVTYKGVRSAEF- 175
Query: 181 IVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDV 224
+ W D +R R + G + I +
Sbjct: 176 -----IFRGW----DLRRRTNSRQLILVDAGPNGDIETAIVRRM 210
>gi|195155670|ref|XP_002018724.1| GL25951 [Drosophila persimilis]
gi|194114877|gb|EDW36920.1| GL25951 [Drosophila persimilis]
Length = 1238
Score = 39.9 bits (91), Expect = 0.37, Method: Composition-based stats.
Identities = 16/188 (8%), Positives = 38/188 (20%), Gaps = 7/188 (3%)
Query: 33 ISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTH 92
I E + I + + + SQE + + + S
Sbjct: 549 IEVPESEELKIIEDSQEKPITDETSPGTEIIEVKESQEEMPSEQEENKETADTSQDKIKP 608
Query: 93 ATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTV 152
++ + A+ K +S + Q K +
Sbjct: 609 DLDSILNDLKKETEAVKEIKLAVDEPEAETKPKPVLSSILDDLQKEMSAVKNIKLEQVKL 668
Query: 153 VVRPDKKELLSKVEKSSRKRIPSQDAI-------AIVRNRVIANWNIPSDFKRFKKLRVK 205
+ S K + + + + R+ N +
Sbjct: 669 NNSTIIEVSSDDEAVSKVKGNANTEEVIELCDSDDNQKQRISPNKTPSKNKSIKDFFDTS 728
Query: 206 MHFQLNQK 213
+
Sbjct: 729 YVVKRTPD 736
>gi|184157198|ref|YP_001845537.1| putative TonB-related protein [Acinetobacter baumannii ACICU]
gi|183208792|gb|ACC56190.1| putative TonB-related protein [Acinetobacter baumannii ACICU]
Length = 306
Score = 39.9 bits (91), Expect = 0.37, Method: Composition-based stats.
Identities = 26/251 (10%), Positives = 63/251 (25%), Gaps = 22/251 (8%)
Query: 11 MILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQE 70
+ LHV + +L + + L V + + E + + Q
Sbjct: 35 IGLHVFVVWMLSHLIEPYTFKATPKVDALKVSFVSLAP-AKKPSAEKTESQPKNSVTPQS 93
Query: 71 NLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISK 130
L S + + S + + ++ + + ++
Sbjct: 94 TLNSSVSHAPDQPKNSPTNVQTLASKTASKEAVQNNLNDKQQVQSKTTLNNSTSL-QPAQ 152
Query: 131 ATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVI--- 187
T + + T + + + Q+ +V
Sbjct: 153 RTERLVTHTDKKLSSTDFEQTQTEQLPQNTNSETKSGGVKTPAMQQEYSKAPSTQVEHDD 212
Query: 188 ------------ANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRML 235
+ + + V++ ++N+KG + G + L
Sbjct: 213 VVQVSSVDVLSFGGLDYDDRELKQQNRLVELRIRINEKGQPINIQLRQSSG-----IQSL 267
Query: 236 RENARKAVIKS 246
E +AV KS
Sbjct: 268 DERVIQAVRKS 278
>gi|169795059|ref|YP_001712852.1| tolerance to group A colicins, single-stranded filamentous DNA
phage, required for OM integrity [Acinetobacter
baumannii AYE]
gi|215482608|ref|YP_002324800.1| protein TolA [Acinetobacter baumannii AB307-0294]
gi|332851093|ref|ZP_08433202.1| protein TolA [Acinetobacter baumannii 6013150]
gi|169147986|emb|CAM85849.1| tolerance to group A colicins, single-stranded filamentous DNA
phage, required for OM integrity [Acinetobacter
baumannii AYE]
gi|213986646|gb|ACJ56945.1| protein TolA [Acinetobacter baumannii AB307-0294]
gi|332730257|gb|EGJ61582.1| protein TolA [Acinetobacter baumannii 6013150]
Length = 448
Score = 39.9 bits (91), Expect = 0.37, Method: Composition-based stats.
Identities = 23/208 (11%), Positives = 60/208 (28%), Gaps = 8/208 (3%)
Query: 47 EDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKG 106
+ ++ + + Q+ + + + A + K + +K
Sbjct: 232 DAKRKAESDAKAKQQAADNAKRKAEADAKAKQQKAAEDAKRKAEADAKAKQQKAAEDAKR 291
Query: 107 EQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVE 166
+ A + ++ + A K+Q + + + KK +
Sbjct: 292 KAEADAKAKQQKAAEDAKRKAEADAKAKQQKAAEDARRKAEIEAEEKAASAKKAQEEAAQ 351
Query: 167 KSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVG 226
K + + A ++ W++P+ V + F L+ G V + G
Sbjct: 352 KKGEAKKIASSAKRDFEQKIRRAWDVPTGSSGK---TVSVRFTLSDSGSVSSIVITRSSG 408
Query: 227 GTELVRRMLRENARKAVIKSQAFRLSPS 254
L + + A+ S + +
Sbjct: 409 DD-----ALDASIKAAIQASAPYPMPSD 431
>gi|149201982|ref|ZP_01878956.1| TonB-like protein [Roseovarius sp. TM1035]
gi|149145030|gb|EDM33059.1| TonB-like protein [Roseovarius sp. TM1035]
Length = 305
Score = 39.9 bits (91), Expect = 0.37, Method: Composition-based stats.
Identities = 17/218 (7%), Positives = 42/218 (19%), Gaps = 12/218 (5%)
Query: 28 QLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSD 87
+ + + ++ S + P ++
Sbjct: 78 PTKPDGTEAQAVRPQKVHAVAKASEALQMPVVPSAPAVTAATPATPATKDPAPAPASQPS 137
Query: 88 QTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKK 147
+ A L +A R P K + D
Sbjct: 138 VARPKAETGLEISKRPKARPTQLTATATPRAAPKPDRKTAARATSGSNADQTATRG---S 194
Query: 148 SIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMH 207
+ + + + + V + + + +
Sbjct: 195 MTGHETATAATEGRPKDHQSKTPGTAATSNYPGQVMRHLAR----VPRPRADTRGVALVQ 250
Query: 208 FQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIK 245
F +++ G + G T L A V +
Sbjct: 251 FSISEGGRLASVRVARSSGSTR-----LDRAALTVVER 283
>gi|118579665|ref|YP_900915.1| TonB family protein [Pelobacter propionicus DSM 2379]
gi|118502375|gb|ABK98857.1| outer membrane transport energization protein TonB [Pelobacter
propionicus DSM 2379]
Length = 269
Score = 39.9 bits (91), Expect = 0.37, Method: Composition-based stats.
Identities = 29/244 (11%), Positives = 61/244 (25%), Gaps = 29/244 (11%)
Query: 10 SMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQ 69
S++LH F F L + + VD + P
Sbjct: 22 SLVLHGA-----LFAFCCTLPYTPKVHDCIMVDLRMPSFATLAPMGGRPAPG-------- 68
Query: 70 ENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKIS 129
+ + ++ + + + K++A SP ++ +
Sbjct: 69 ---PKSAATRKAAAPGPAAHQEPSPLATPLPRPQAIATPIQKQAAAQPPLPSPVNQGTAT 125
Query: 130 KATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNR---- 185
+ T + Q + + S + +
Sbjct: 126 EGTARGQQTGAATSHGGGDAGGTAQGGGGSSSGNSGSGSGGSGGSGKPFEGEFGAQGGPT 185
Query: 186 -VIANWNIPSDFKRF--KKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKA 242
+ + F R K+ V + L++ G + G ++ G E A A
Sbjct: 186 YLSRVLPVYPRFARRLGKEGTVLLRLTLDESGALKGVELLEKAGHG------FDEAALTA 239
Query: 243 VIKS 246
V S
Sbjct: 240 VKAS 243
>gi|307720593|ref|YP_003891733.1| TonB family protein [Sulfurimonas autotrophica DSM 16294]
gi|306978686|gb|ADN08721.1| TonB family protein [Sulfurimonas autotrophica DSM 16294]
Length = 242
Score = 39.9 bits (91), Expect = 0.38, Method: Composition-based stats.
Identities = 31/246 (12%), Positives = 68/246 (27%), Gaps = 34/246 (13%)
Query: 13 LHVMFLLLL--YFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQE 70
+HV+ LL L + + + PI + + + V+ + K+ + +
Sbjct: 14 IHVLILLSLFGIYKYAFSSVKPIEKEKRICVNLTRIKQKAVVAQKQKVQKSKPLHKKIVK 73
Query: 71 NLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISK 130
V + + E + + + +S +K+
Sbjct: 74 KPVIHKKAPAKKPKRVKKKVPLKKEIKKEEPKVIEKPIEPIKSVEPAEQPPQIEKK---- 129
Query: 131 ATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANW 190
T VV +K S + ++ +A + + N
Sbjct: 130 --------------------TEVVANKIVANEIPQKKMSDEEQYLENNLAKISQLIKENL 169
Query: 191 NIPSDFKRFK-KLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAV-IKSQA 248
P ++ + V + F L + V + G +L A K + S
Sbjct: 170 YYPRMARKRGIQGSVTVRFMLLKDATVTQITTISSNSG------ILTRAAIKTIAELSGK 223
Query: 249 FRLSPS 254
F +
Sbjct: 224 FPKPKT 229
>gi|289616245|emb|CBI57041.1| unnamed protein product [Sordaria macrospora]
Length = 2605
Score = 39.9 bits (91), Expect = 0.38, Method: Composition-based stats.
Identities = 17/151 (11%), Positives = 49/151 (32%), Gaps = 1/151 (0%)
Query: 28 QLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSD 87
+ P+ + SV+ + K +E+PVV+ + E V+E+ + +
Sbjct: 863 PVEKPVEKPTEKSVEKPVVKPVDKPVEKPVEKPVVKPTEKAVEKA-AQKVVEESAQKQDE 921
Query: 88 QTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKK 147
++ E E +++ L P +Q + + Q + +
Sbjct: 922 PEPPRVSQPEPAPEPKPVPESKKEKALELLPEKLPEPEQSLQLQPQLQPQPQPQPQPQPQ 981
Query: 148 SIDTVVVRPDKKELLSKVEKSSRKRIPSQDA 178
+ + + ++ ++ ++
Sbjct: 982 AQTQAQTQAQAQAQAQAQAQAQPPQLLTEPE 1012
>gi|167945450|ref|ZP_02532524.1| hypothetical protein Epers_02550 [Endoriftia persephone
'Hot96_1+Hot96_2']
Length = 133
Score = 39.9 bits (91), Expect = 0.38, Method: Composition-based stats.
Identities = 8/64 (12%), Positives = 23/64 (35%), Gaps = 2/64 (3%)
Query: 154 VRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQK 213
+ +++ L + + +R ++ +W P + + L + +L
Sbjct: 1 AQVAREQELQAQLAAEQNSRQLDRYTIAIRQQIERSWLRPPN--TGEGLACVVRVRLLPG 58
Query: 214 GFVL 217
G V+
Sbjct: 59 GEVM 62
>gi|294637422|ref|ZP_06715713.1| protein TolA [Edwardsiella tarda ATCC 23685]
gi|291089415|gb|EFE21976.1| protein TolA [Edwardsiella tarda ATCC 23685]
Length = 416
Score = 39.9 bits (91), Expect = 0.38, Method: Composition-based stats.
Identities = 15/113 (13%), Positives = 37/113 (32%), Gaps = 2/113 (1%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPV 61
+L + IS+ILH++ + LL + L D + +
Sbjct: 28 KLNRSVIISVILHIVLIGLLV--WGSMLQDNPMSEGGDGGGGGSAIDAVMVDPNAVVQQY 85
Query: 62 VQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESA 114
+ + + Q+ ++ + + + E + + + K +E A
Sbjct: 86 NRQQEQQNAAQRAEQQRQKQAEKQAQEMQRKQAEEQQRLKALEKERLQAQEDA 138
>gi|329957264|ref|ZP_08297784.1| TonB family domain protein [Bacteroides clarus YIT 12056]
gi|328522977|gb|EGF50080.1| TonB family domain protein [Bacteroides clarus YIT 12056]
Length = 270
Score = 39.9 bits (91), Expect = 0.39, Method: Composition-based stats.
Identities = 28/229 (12%), Positives = 65/229 (28%), Gaps = 2/229 (0%)
Query: 6 GLAISMILHVMFLLLLYF-NFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQF 64
GLA ++++HV+ + LL F + ++ + ++E +
Sbjct: 11 GLAGALLVHVVVIALLILVGFTLPEQSEEGGVPVMMGETSDAWGVADPSLVEVETMPEEA 70
Query: 65 KGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYD 124
E ++ QE+ + + + K + E K+ ++ E+A + L
Sbjct: 71 APEVPEEAEQEMLTQEDEETVAIKPKAEEKKKEIKKPEKTEAEKAEEARKLAAEKAERER 130
Query: 125 KQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRN 184
K + G T + ++ R+
Sbjct: 131 KAAEEATRKRVAGAFGKGAQMGSKGSTEGTGVQGSPTGNSSRGATAGTGGYGTFNLGGRS 190
Query: 185 RVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRR 233
+ + + +V + +N G V+G R
Sbjct: 191 -IGEGGLPRPVYNVQDEGKVVVTITVNPAGQVIGTSINRQTNTVNPALR 238
>gi|169632715|ref|YP_001706451.1| tolerance to group A colicins, single-stranded filamentous DNA
phage, required for OM integrity [Acinetobacter
baumannii SDF]
gi|169151507|emb|CAP00270.1| tolerance to group A colicins, single-stranded filamentous DNA
phage, required for OM integrity [Acinetobacter
baumannii]
Length = 430
Score = 39.9 bits (91), Expect = 0.39, Method: Composition-based stats.
Identities = 24/210 (11%), Positives = 62/210 (29%), Gaps = 8/210 (3%)
Query: 45 YNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSS 104
++ K ++ + Q+ + + + A + K + +
Sbjct: 212 QEAKRKAAADAKAKQQKAAEDAKRKAEADAKAKQQKAAEDAKRKAEADAKAKQQKAAEDA 271
Query: 105 KGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSK 164
K + A + ++ + A K+Q + + + + KK
Sbjct: 272 KRKAEADAKAKQQKAAEDAKRKAEADAKAKQQKVAEDARRKAEIEAEEKAASAKKAQEEA 331
Query: 165 VEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDV 224
+K + + A ++ W++P+ V + F L+ G V +
Sbjct: 332 AQKKGEAKKIASSAKRDFEQKIRRAWDVPTGSSGK---TVSVRFTLSDSGSVSSIVITRS 388
Query: 225 VGGTELVRRMLRENARKAVIKSQAFRLSPS 254
G L + + A+ S + +
Sbjct: 389 SGDD-----ALDASIKAAIQASAPYPMPSD 413
>gi|328953797|ref|YP_004371131.1| TonB family protein [Desulfobacca acetoxidans DSM 11109]
gi|328454121|gb|AEB09950.1| TonB family protein [Desulfobacca acetoxidans DSM 11109]
Length = 217
Score = 39.9 bits (91), Expect = 0.39, Method: Composition-based stats.
Identities = 19/157 (12%), Positives = 38/157 (24%), Gaps = 7/157 (4%)
Query: 91 THATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSID 150
T A + E E + + P + K E
Sbjct: 43 TMAEKPMASEPPPRTVEPPKPEPVRPKPKIRPQPRPKPVVTEPVETKTFIPQPITAAQPS 102
Query: 151 TVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQL 210
+ + RV+ + + + RV + +
Sbjct: 103 PPISPRRTVTRGTGAPTGPLVTDFGSATGPAFLRRVMPVYPEMARRLGKEG-RVVLRLSI 161
Query: 211 NQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQ 247
+ +G + G + G E+A +AV +S
Sbjct: 162 DARGNLRGVEVIQGAGFG------FEESAMRAVKQSS 192
Score = 39.1 bits (89), Expect = 0.59, Method: Composition-based stats.
Identities = 17/205 (8%), Positives = 46/205 (22%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
G+ IS + H + LL+ ++++ + + +P
Sbjct: 9 GIFISALCHCLILLIPISLATKVSKTFPPVEFIMTMAEKPMASEPPPRTVEPPKPEPVRP 68
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
R V T + S + A V+ +
Sbjct: 69 KPKIRPQPRPKPVVTEPVETKTFIPQPITAAQPSPPISPRRTVTRGTGAPTGPLVTDFGS 128
Query: 126 QKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNR 185
+ + VV+R + + + +R
Sbjct: 129 ATGPAFLRRVMPVYPEMARRLGKEGRVVLRLSIDARGNLRGVEVIQGAGFGFEESAMRAV 188
Query: 186 VIANWNIPSDFKRFKKLRVKMHFQL 210
+++ + ++ +
Sbjct: 189 KQSSFRPAMVQGEPRDSIARLPIKF 213
>gi|330815831|ref|YP_004359536.1| Putative lipoprotein [Burkholderia gladioli BSR3]
gi|327368224|gb|AEA59580.1| Putative lipoprotein [Burkholderia gladioli BSR3]
Length = 168
Score = 39.9 bits (91), Expect = 0.40, Method: Composition-based stats.
Identities = 9/92 (9%), Positives = 26/92 (28%), Gaps = 10/92 (10%)
Query: 168 SSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLR---VKMHFQLNQKGFVLGKINVDV 224
+ V R++ + + V + F +++ G +
Sbjct: 47 PAAGAATQAQYRDAVAQRILDANAARVLHGTPQAMLRSLVVVSFTVDRDGRLAQSSVYRS 106
Query: 225 VGGTELVRRMLREN-ARKAVIKSQAFRLSPST 255
G + E A +++ ++ P+
Sbjct: 107 NGDDD------AEAIALQSLRRAAPLPRPPAG 132
>gi|126733169|ref|ZP_01748916.1| helicase, putative [Roseobacter sp. CCS2]
gi|126716035|gb|EBA12899.1| helicase, putative [Roseobacter sp. CCS2]
Length = 944
Score = 39.9 bits (91), Expect = 0.40, Method: Composition-based stats.
Identities = 16/150 (10%), Positives = 32/150 (21%)
Query: 27 VQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFS 86
V+ P + V+ + + PV + QE V S
Sbjct: 791 VKAAKPPQTPDTPPVEVPDTPQPDAPQEIPGLPPVETPPDAPQETPVDPPSETPTDVPQE 850
Query: 87 DQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEK 146
T A ++ ++ P Q ++ K +
Sbjct: 851 LPADTPADTPPVPDPNAESEQEVFYTFTWGGRAARPARPQGDARPRGKGKPKGKGKPQGG 910
Query: 147 KSIDTVVVRPDKKELLSKVEKSSRKRIPSQ 176
S + K + +
Sbjct: 911 GSNKPQTYQAKPKREKQIDPDNPFAAALAG 940
>gi|189235987|ref|XP_971849.2| PREDICTED: similar to BMKETTIN [Tribolium castaneum]
Length = 20466
Score = 39.9 bits (91), Expect = 0.40, Method: Composition-based stats.
Identities = 19/155 (12%), Positives = 53/155 (34%), Gaps = 1/155 (0%)
Query: 30 LVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQT 89
PI + E+ +VD + + ++ + + + V + + D+
Sbjct: 5475 SKPIPKEELETVDLKPVSLQKAKPTETVQLDRAEVGETKEIITVDEKQEKLKVIEKKDEP 5534
Query: 90 KT-HATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKS 148
K++ E ++ +++ + + I K + DL+ +S + K
Sbjct: 5535 VPWTQQPITLKKAPREPKEVPKEKIEEIQLKPTRRGSKPIPKEELETVDLKPLSLQKAKP 5594
Query: 149 IDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVR 183
+T + + E + ++ + + I R
Sbjct: 5595 TETNKLPQAQVEDTTILKIDEKVDETEKTQIKQWR 5629
Score = 39.5 bits (90), Expect = 0.46, Method: Composition-based stats.
Identities = 18/136 (13%), Positives = 47/136 (34%), Gaps = 1/136 (0%)
Query: 30 LVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQT 89
PI + E+ +VD + + + Q + + + V + + D+
Sbjct: 5379 SKPIPKEELETVDLKPVSLQKAKPTETDQLDSAQVEETKEIIKVEEKPDKLKVIEKKDEP 5438
Query: 90 KT-HATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKS 148
K++ E ++ +++ + + I K + DL+ +S + K
Sbjct: 5439 VPWTQQPITLKKAPREPKEVPKEKVEEIQLKPTRRGSKPIPKEELETVDLKPVSLQKAKP 5498
Query: 149 IDTVVVRPDKKELLSK 164
+TV + + +
Sbjct: 5499 TETVQLDRAEVGETKE 5514
Score = 38.3 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 20/148 (13%), Positives = 42/148 (28%), Gaps = 2/148 (1%)
Query: 25 FNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENG-- 82
L PIS +++ V+ E K++ + + ++ Q+
Sbjct: 5293 LETVDLKPISLQKVKPVETDQLERAQVETTKELVKEKQEKPKVIEKKEEPVPWTQQPITL 5352
Query: 83 DRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGIS 142
+ + K E + + V + L
Sbjct: 5353 KKAPREPKEVPKEKVEEIQLKPTRRGSKPIPKEELETVDLKPVSLQKAKPTETDQLDSAQ 5412
Query: 143 FAEKKSIDTVVVRPDKKELLSKVEKSSR 170
E K I V +PDK +++ K ++
Sbjct: 5413 VEETKEIIKVEEKPDKLKVIEKKDEPVP 5440
Score = 38.0 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 11/142 (7%), Positives = 37/142 (26%), Gaps = 4/142 (2%)
Query: 40 SVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETK 99
SVD + + ++ Q + +E + + ++ K
Sbjct: 5235 SVDLVQD----QVPKEEPIPWNKQEIKLKPAPKEKKDIPKEKPEEVQLKPTRRDSKTIPK 5290
Query: 100 RSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKK 159
+ + + + + ++ ++ ++ Q +K + V
Sbjct: 5291 EELETVDLKPISLQKVKPVETDQLERAQVETTKELVKEKQEKPKVIEKKEEPVPWTQQPI 5350
Query: 160 ELLSKVEKSSRKRIPSQDAIAI 181
L + + I +
Sbjct: 5351 TLKKAPREPKEVPKEKVEEIQL 5372
>gi|320323662|gb|EFW79746.1| tonB protein, putative [Pseudomonas syringae pv. glycinea str.
B076]
Length = 280
Score = 39.9 bits (91), Expect = 0.41, Method: Composition-based stats.
Identities = 13/111 (11%), Positives = 31/111 (27%), Gaps = 2/111 (1%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLS--VDNIYNEDYHSSKYKKIEEPVVQ 63
+A+++ LH + L L F ++ P R + + V + + EPV
Sbjct: 27 AVAVALALHGVLLGGLMFGWSPHEAPPAQNRTLTTQLVILPPAPEPVPVTAASVVEPVQL 86
Query: 64 FKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESA 114
+ + + A + + + +
Sbjct: 87 PPPAPASLPITQPVEAAKPQAEPQRQVEQAALARKRVDEQKREREQQQSVQ 137
>gi|182679848|ref|YP_001833994.1| TonB family protein [Beijerinckia indica subsp. indica ATCC 9039]
gi|182635731|gb|ACB96505.1| TonB family protein [Beijerinckia indica subsp. indica ATCC 9039]
Length = 411
Score = 39.9 bits (91), Expect = 0.42, Method: Composition-based stats.
Identities = 28/183 (15%), Positives = 55/183 (30%), Gaps = 1/183 (0%)
Query: 7 LAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNI-YNEDYHSSKYKKIEEPVVQFK 65
LA S ++H+ +L L + P E + V+ + + E
Sbjct: 55 LAASAVIHLCLILALIALWPDVTSDPQKAHEEIPVEVVLEQKPETPLSTPTGEGTSAALA 114
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
+ Q+ + + T++ET ++ S K EQ E + + K
Sbjct: 115 AAKQKEEQASDADAAKNATGGGEEGKDPTKSETAKADSLKSEQDKPEQSKSNLAKMEPPK 174
Query: 126 QKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNR 185
Q+ SK + + A + K +K + + + A R
Sbjct: 175 QEASKPETTKAETAKSELARPATQSHAAKSQTAKSQAAKPQPKASDANKTAAATQREHAR 234
Query: 186 VIA 188
Sbjct: 235 AER 237
>gi|160897902|ref|YP_001563484.1| protein TolA [Delftia acidovorans SPH-1]
gi|160363486|gb|ABX35099.1| protein TolA [Delftia acidovorans SPH-1]
Length = 380
Score = 39.9 bits (91), Expect = 0.42, Method: Composition-based stats.
Identities = 28/224 (12%), Positives = 61/224 (27%), Gaps = 8/224 (3%)
Query: 47 EDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKG 106
+D ++ ++ Q + E +D + +E D+ E K
Sbjct: 165 KDRRDKLEQQKKDKAEQDRKDRLEQQKKDKAEKEKADKEKAARDKAEREKAEKADKEKAA 224
Query: 107 EQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVE 166
+ ++ A ++ +A E + + +
Sbjct: 225 KAEAEKKAAEDKRKKEQAAKEAREAKEAEARRLENIRRMQGLAGSGGSAGEGAGGSKSGG 284
Query: 167 KSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVG 226
S PS A V RV N P R ++ + G + G G
Sbjct: 285 SGSSAAGPSAGYGAKVAARVKPNIVYPDAISG--NPRAEVRVRTAPDGTITGATIAKSSG 342
Query: 227 GTELVRRMLRENARKAVIKSQAFRLSPSTYKSWRNITLFFVPSK 270
+ + +A+ K++ + ++ + F P
Sbjct: 343 N-----KAWDDAVIRALQKTETLPRDIDG-RVPSDLVIGFRPQD 380
>gi|160874208|ref|YP_001553524.1| hypothetical protein Sbal195_1088 [Shewanella baltica OS195]
gi|160859730|gb|ABX48264.1| conserved hypothetical protein [Shewanella baltica OS195]
gi|315266441|gb|ADT93294.1| Tol-Pal system TolA [Shewanella baltica OS678]
Length = 122
Score = 39.9 bits (91), Expect = 0.42, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 37/92 (40%), Gaps = 12/92 (13%)
Query: 181 IVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENAR 240
+V N++ +N + FK VK++F L+++ V+ + E L E +
Sbjct: 36 LVMNKIQSNLVVDES---FKDQMVKVNFHLDEQANVVNYSVIQPSQLAE-----LNEAVK 87
Query: 241 KAVIKSQAFR----LSPSTYKSWRNITLFFVP 268
AV S F +P + + I L P
Sbjct: 88 AAVYASSPFSEVLFAAPVVFTEIKEINLTVTP 119
>gi|307204650|gb|EFN83272.1| Titin [Harpegnathos saltator]
Length = 14447
Score = 39.9 bits (91), Expect = 0.42, Method: Composition-based stats.
Identities = 17/160 (10%), Positives = 46/160 (28%), Gaps = 4/160 (2%)
Query: 28 QLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVR----DFSVQENGD 83
VPI E++ V+ + D + K +E + Q + + + +
Sbjct: 9379 LKPVPIEGPEIIPVEEVSRVDVTTVKETTMESKEIDKIIIDQTDKTKPWTEEKITLKKSK 9438
Query: 84 RFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISF 143
+ + E + S + K S ++K + T + I
Sbjct: 9439 PVRREVEREIIETVELKPSKPTKLEIRKPSLERVDLKPFTKEKKDTSVTETTEKADYIEQ 9498
Query: 144 AEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVR 183
+ + + + E ++ ++++
Sbjct: 9499 EDTTLLQVSRTEKEVTLPKATREIKDTAPYAEEEDTSLLK 9538
Score = 37.6 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 19/162 (11%), Positives = 52/162 (32%), Gaps = 1/162 (0%)
Query: 24 NFNVQLLVPISRRE-MLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENG 82
++ + PI E +V E + KK E V +
Sbjct: 10433 SWRKKKPKPIKLEEKKETVVLKPVEKVQKLEPKKQPEEHVPTVIKEEIVTEVVEKDVIQL 10492
Query: 83 DRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGIS 142
+ + E K K E + ++ + P ++ +++ + ++
Sbjct: 10493 KPVPKEVEEKEVIEEVKLKPVIKEEITKERPKEEKIELKPVKLEEQITKVKEDEIVTKVT 10552
Query: 143 FAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRN 184
+KK + V + +K+++++++E+ +
Sbjct: 10553 EIKKKREEIVPIIEEKQKIVTEIEEIKEIEDIELQVKKDIAQ 10594
>gi|303328321|ref|ZP_07358759.1| basic proline-rich protein [Desulfovibrio sp. 3_1_syn3]
gi|302861651|gb|EFL84587.1| basic proline-rich protein [Desulfovibrio sp. 3_1_syn3]
Length = 393
Score = 39.9 bits (91), Expect = 0.42, Method: Composition-based stats.
Identities = 22/94 (23%), Positives = 35/94 (37%), Gaps = 9/94 (9%)
Query: 173 IPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVR 232
+ V ++VIA W P K + V++ L+ +G VL G
Sbjct: 32 DQNGGYSGKVLDKVIAVWAPPPALKG--EFEVRLKVSLDGQGKVLNCAPTKASG-----M 84
Query: 233 RMLRENARKAVIKSQAFRLSPSTYKSWRNITLFF 266
L +A AV ++ F P Y ++ L F
Sbjct: 85 EALDSSACGAVRQAAPFGTPP--YGMPLDVHLAF 116
>gi|193078075|gb|ABO13010.2| tolerance to group A colicins single-stranded filamentous DNA phage
[Acinetobacter baumannii ATCC 17978]
Length = 448
Score = 39.9 bits (91), Expect = 0.42, Method: Composition-based stats.
Identities = 23/208 (11%), Positives = 60/208 (28%), Gaps = 8/208 (3%)
Query: 47 EDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKG 106
+ ++ + + Q+ + + + A + K + +K
Sbjct: 232 DAKRKAEADAKAKQQAADNAKRKAEADAKAKQQKAAEDAKRKAEADAKAKQQKAAEDAKR 291
Query: 107 EQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVE 166
+ A + ++ + A K+Q + + + KK +
Sbjct: 292 KAEADAKAKQQKAAEDAKRKAEADAKAKQQKAAEDARRKAEIEAEEKAASAKKAQEEAAQ 351
Query: 167 KSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVG 226
K + + A ++ W++P+ V + F L+ G V + G
Sbjct: 352 KKGEAKKIASSAKRDFEQKIRRAWDVPTGSSGK---TVSVRFTLSDSGSVSSIVITRSSG 408
Query: 227 GTELVRRMLRENARKAVIKSQAFRLSPS 254
L + + A+ S + +
Sbjct: 409 DD-----ALDASIKAAIQASAPYPMPSD 431
>gi|169601214|ref|XP_001794029.1| hypothetical protein SNOG_03466 [Phaeosphaeria nodorum SN15]
gi|160705884|gb|EAT88671.2| hypothetical protein SNOG_03466 [Phaeosphaeria nodorum SN15]
Length = 763
Score = 39.9 bits (91), Expect = 0.43, Method: Composition-based stats.
Identities = 13/140 (9%), Positives = 43/140 (30%), Gaps = 2/140 (1%)
Query: 53 KYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKE 112
+++K +E +Q G ++ + + K+ + + S+ + +
Sbjct: 381 EFEKKQEVKLQQPGLTRSASLNQPEPKAKKPVLPPVRKSDPLIDPFQPSAEKQKYLSRTR 440
Query: 113 SALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKR 172
+ L +K+ + + ++ E + + + +K + S+
Sbjct: 441 PSWLPPKNPKEEKKHLKEYQKMLARIEEAERLEAQRVQEEALAREKATRVKAEYWSTLLL 500
Query: 173 IPSQDAIA--IVRNRVIANW 190
+ +R W
Sbjct: 501 PNWATEMDNPALRATHRKMW 520
>gi|307193151|gb|EFN76057.1| Atrial natriuretic peptide-converting enzyme [Harpegnathos
saltator]
Length = 2585
Score = 39.9 bits (91), Expect = 0.43, Method: Composition-based stats.
Identities = 20/184 (10%), Positives = 39/184 (21%), Gaps = 3/184 (1%)
Query: 58 EEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLR 117
EP + ++ + A E E + +
Sbjct: 624 AEPESSAEPEPSTEPEPAAEPEQAAEPEPTAQSVPAAEPEPSIEPEAAAQPEPTAEPKPE 683
Query: 118 MPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLS---KVEKSSRKRIP 174
+ + A+ E + S A K + K S +
Sbjct: 684 LTTESEPTSEPEPASEPETTMISESDATTKPEIGSTAEVESAIDGQPIVKPLTESAESAT 743
Query: 175 SQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRM 234
+ D I V N + +P L + D + +
Sbjct: 744 TSDEIDAVNNNIETTTELPHMTTMQSHLDTDAEISNLPDSTMKSMSRDDTYIEPQTQASI 803
Query: 235 LREN 238
L +
Sbjct: 804 LDDA 807
>gi|71733371|ref|YP_275167.1| tonB protein [Pseudomonas syringae pv. phaseolicola 1448A]
gi|71553924|gb|AAZ33135.1| tonB protein, putative [Pseudomonas syringae pv. phaseolicola
1448A]
gi|320328300|gb|EFW84304.1| tonB protein, putative [Pseudomonas syringae pv. glycinea str. race
4]
Length = 280
Score = 39.9 bits (91), Expect = 0.44, Method: Composition-based stats.
Identities = 13/111 (11%), Positives = 30/111 (27%), Gaps = 2/111 (1%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREML--SVDNIYNEDYHSSKYKKIEEPVVQ 63
+A+++ LH + L L F ++ P R + V + + EPV
Sbjct: 27 AVAVALALHGVLLGGLMFGWSPHEAPPAQNRTLTTQLVILPPAPEPVPVTAASVVEPVQL 86
Query: 64 FKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESA 114
+ + + A + + + +
Sbjct: 87 PPPAPASLPITQPVEAAKPQAEPQRQVEQAALARKRVDEQKREREQQQSVQ 137
>gi|293365783|ref|ZP_06612489.1| conserved hypothetical protein [Streptococcus oralis ATCC 35037]
gi|291315716|gb|EFE56163.1| conserved hypothetical protein [Streptococcus oralis ATCC 35037]
Length = 797
Score = 39.5 bits (90), Expect = 0.44, Method: Composition-based stats.
Identities = 5/112 (4%), Positives = 21/112 (18%)
Query: 84 RFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISF 143
+ T + E + + ++
Sbjct: 351 PAPKPAEKPKTPAQKPAEKPKTPAPKPAEKPKTPAQKPADKPKTPAPKPAEKTKETTPKQ 410
Query: 144 AEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSD 195
+ +S + + + + +V ++W +
Sbjct: 411 DKSQSKVQSGWVGNYYLKSDGKRAKNEWVDGGRYYVDSDGKKVKSDWIYDKN 462
>gi|307204648|gb|EFN83270.1| Myosin light chain kinase, smooth muscle [Harpegnathos saltator]
Length = 9315
Score = 39.5 bits (90), Expect = 0.45, Method: Composition-based stats.
Identities = 16/174 (9%), Positives = 56/174 (32%), Gaps = 7/174 (4%)
Query: 28 QLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSD 87
I +++ + I D +K ++ + +++ + +++ +
Sbjct: 6224 LKPTAIEEAKVIPDEQIKVTDTQENKKAPMQRRSKRESKKAEK--ADEEPIEKRKEEIRK 6281
Query: 88 QTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKK 147
+ A + + K +A K+ R +++ + + K+++ +E +
Sbjct: 6282 MDEKTAQTQSVHVNDAMKENEASKDDRQYRKSNEDWERDERLRMRQKQEEKFSGKISELQ 6341
Query: 148 SIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKK 201
+ + + +++ K + +R+ W D R
Sbjct: 6342 ERENKSLYLKINKEINETGKEEE-----RRWPQDIRSDESRIWKERKDRSRRND 6390
>gi|167537733|ref|XP_001750534.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163770955|gb|EDQ84630.1| predicted protein [Monosiga brevicollis MX1]
Length = 3678
Score = 39.5 bits (90), Expect = 0.45, Method: Composition-based stats.
Identities = 14/146 (9%), Positives = 29/146 (19%), Gaps = 3/146 (2%)
Query: 44 IYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSV---QENGDRFSDQTKTHATENETKR 100
+ S P KG + + + + +
Sbjct: 2756 VPAVSPKPSAKGPAVSPKPSAKGPAVAPKPSAKGPAVAPKPSAKGPAVALKPSAKGPAVA 2815
Query: 101 SSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKE 160
S A+ + P A + +G + A K S V P
Sbjct: 2816 LKPSAKGPAVAPKPSAKGPAVAPKPSAKGPAVAPKPSAKGPAVALKPSTKGPAVAPKPSA 2875
Query: 161 LLSKVEKSSRKRIPSQDAIAIVRNRV 186
+ + ++
Sbjct: 2876 KGPAAAARGVNLDRAAGSANTKHAQI 2901
>gi|284925404|gb|ADC27756.1| TonB domain-containing protein [Campylobacter jejuni subsp. jejuni
IA3902]
Length = 259
Score = 39.5 bits (90), Expect = 0.45, Method: Composition-based stats.
Identities = 22/223 (9%), Positives = 68/223 (30%), Gaps = 16/223 (7%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
+++ ++V ++L++F + + +I + + ++ + Q
Sbjct: 11 SFLLALAIYVGIVILVFF------RLVSEVEPAIQYTDIKDSFVDIELAEPSKQVITQSN 64
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
+ + E + + + K S+ ++ +KE +
Sbjct: 65 TPKEIQKSTEQIDIEKLFAQTTNKTVKTEDIDQKASNFNELFGNIKEIQEEKTTKIQSSA 124
Query: 126 QKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNR 185
+ + K Q + + + + ++K + + V
Sbjct: 125 KSGISSAPKPQASELVKQLNDSLLQE-------ESSTQGESTKAQKIGIYDEFLGKVVRI 177
Query: 186 VIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGT 228
+ W +K+ VK+ +++ G G +V+ G
Sbjct: 178 ITQRWTQYY--PNSEKISVKVKIFIDENGKF-GYTSVEKSGNP 217
>gi|227545067|ref|ZP_03975116.1| acyltransferase [Lactobacillus reuteri CF48-3A]
gi|300909264|ref|ZP_07126725.1| acyltransferase [Lactobacillus reuteri SD2112]
gi|227184946|gb|EEI65017.1| acyltransferase [Lactobacillus reuteri CF48-3A]
gi|300893129|gb|EFK86488.1| acyltransferase [Lactobacillus reuteri SD2112]
Length = 621
Score = 39.5 bits (90), Expect = 0.45, Method: Composition-based stats.
Identities = 15/139 (10%), Positives = 47/139 (33%), Gaps = 6/139 (4%)
Query: 99 KRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDK 158
+ + + K + ++K+ K ++ S K + P +
Sbjct: 405 QPNRAPKKTAVQQRIEQNHQAAEEHNKK-----IAKGDNVAEASGNTSKLQKQYDLTPAQ 459
Query: 159 KELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLG 218
+ K++ ++ DA ++ +++ N + + R + QL G +
Sbjct: 460 IKAAQKLKVTAIGDSVMADAADSIQ-KLMPNTYVDAQVGRQGSATPDVIKQLKTDGHLNK 518
Query: 219 KINVDVVGGTELVRRMLRE 237
+ +++ + + L +
Sbjct: 519 IVVLNLGTNGPMTQDTLDD 537
>gi|254442607|ref|ZP_05056083.1| TonB family C-terminal domain protein [Verrucomicrobiae bacterium
DG1235]
gi|198256915|gb|EDY81223.1| TonB family C-terminal domain protein [Verrucomicrobiae bacterium
DG1235]
Length = 260
Score = 39.5 bits (90), Expect = 0.45, Method: Composition-based stats.
Identities = 24/245 (9%), Positives = 61/245 (24%), Gaps = 26/245 (10%)
Query: 7 LAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIY-----------NEDYHSSKYK 55
+ S +H++ L++ L+ P E + + + ++ Y+
Sbjct: 1 MVFSASVHLVLLVVAAI---WVLVSPEKEPEEFNFELVPPPASGFAQTPVDQPLSEITYE 57
Query: 56 KIEEPVVQFK----GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALK 111
+ + +V + + S +
Sbjct: 58 SEPMELPTEEDFVVPDRPPIVVEVQMPAPEPVVKEQPVVEIESAPPKPKPMSLEEFMRQN 117
Query: 112 ESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRK 171
A V + +D+ + + + + + + S
Sbjct: 118 PDANEIKNVRKTPAPAKQPRIDLSKDVAAMQRSLSQITIGNLPSATIESY--SLADQSAL 175
Query: 172 RIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELV 231
+ ++ V +R KL + ++ G V + G E
Sbjct: 176 NEFISSFHSALKAAVGNY------ERRSVKLSALVSCDISASGRVSNARLIRGSGDPEFD 229
Query: 232 RRMLR 236
RR+L
Sbjct: 230 RRVLA 234
>gi|149691947|ref|XP_001501976.1| PREDICTED: similar to Ubiquitin carboxyl-terminal hydrolase 8
(Ubiquitin thioesterase 8)
(Ubiquitin-specific-processing protease 8)
(Deubiquitinating enzyme 8) (hUBPy) isoform 2 [Equus
caballus]
gi|149691949|ref|XP_001501973.1| PREDICTED: similar to Ubiquitin carboxyl-terminal hydrolase 8
(Ubiquitin thioesterase 8)
(Ubiquitin-specific-processing protease 8)
(Deubiquitinating enzyme 8) (hUBPy) isoform 1 [Equus
caballus]
Length = 1117
Score = 39.5 bits (90), Expect = 0.45, Method: Composition-based stats.
Identities = 15/160 (9%), Positives = 46/160 (28%)
Query: 26 NVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRF 85
+ P +++ I +D S + +
Sbjct: 347 PTAQMPPPPVEVDENIELINEQDERMGPLNVSTPVEPLAASKSDVSSIIQPVPIVKNVPQ 406
Query: 86 SDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAE 145
D+TK A + + S+ ++S V + + + +
Sbjct: 407 IDRTKKPAIKLPEEHRIKSESTDHEQQSPQDGKIVPDRSTKPVFPPPTAMLTDEEKARIH 466
Query: 146 KKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNR 185
++ + +KEL + ++ ++++ ++ R +
Sbjct: 467 AETALLMEKNKQEKELRERQQEEQKEKLRKEEQEQKARKK 506
>gi|115380719|ref|ZP_01467626.1| TonB protein [Stigmatella aurantiaca DW4/3-1]
gi|310822157|ref|YP_003954515.1| TonB domain-containing protein [Stigmatella aurantiaca DW4/3-1]
gi|115362272|gb|EAU61600.1| TonB protein [Stigmatella aurantiaca DW4/3-1]
gi|309395229|gb|ADO72688.1| TonB domain protein [Stigmatella aurantiaca DW4/3-1]
Length = 247
Score = 39.5 bits (90), Expect = 0.46, Method: Composition-based stats.
Identities = 12/80 (15%), Positives = 23/80 (28%), Gaps = 4/80 (5%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSV-DNIYNEDYHSSKYKKIEEP 60
R G A+S++LH F + P V + + + +
Sbjct: 15 RFSAGTAVSVLLHAGVFAAAVF---ITSREPSQEPRKEPVLEFVRHVPPQPPRGNPTPPS 71
Query: 61 VVQFKGSSQENLVRDFSVQE 80
+ + R+ VQ
Sbjct: 72 TPEAAPRPKPKPKRNVLVQP 91
>gi|78776472|ref|YP_392787.1| TonB-like protein [Sulfurimonas denitrificans DSM 1251]
gi|78497012|gb|ABB43552.1| TonB-like protein [Sulfurimonas denitrificans DSM 1251]
Length = 233
Score = 39.5 bits (90), Expect = 0.46, Method: Composition-based stats.
Identities = 22/183 (12%), Positives = 58/183 (31%), Gaps = 9/183 (4%)
Query: 84 RFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISF 143
+ + + + + ++ K E L+ P+ + T +
Sbjct: 51 QPKEIQEETPQKQKIEKPQEPKPLPKPIEKKPLQKPIKREAVVQKEPITEPLKTESIPEV 110
Query: 144 AEKKSIDTVVVRPDKKE-LLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFK-K 201
++ V K + KV ++ K + I + R+ N + P +R +
Sbjct: 111 TNEQPQPQVEKENKKATSNIEKVVENDTKERDREIFINNLIKRINDNKSYPIAARRRAIQ 170
Query: 202 LRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPSTYKSWRN 261
V++ F + G V + + ++A +A+ S + + + +
Sbjct: 171 DSVEVEFMILIDGNVDYIKVI-------SGHNIFEKSATQAIENSFPMEIDKTLFDFPKK 223
Query: 262 ITL 264
+
Sbjct: 224 FKI 226
>gi|308270221|emb|CBX26833.1| hypothetical protein N47_A08620 [uncultured Desulfobacterium sp.]
Length = 217
Score = 39.5 bits (90), Expect = 0.46, Method: Composition-based stats.
Identities = 16/187 (8%), Positives = 45/187 (24%), Gaps = 6/187 (3%)
Query: 58 EEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLR 117
+E + + + V++ + + + +
Sbjct: 10 KEEIQKPIEKPVVKKLSHAPVKKAPLLAPVSKPECPKDEKPAPLPKVNPLHIAESAGGNE 69
Query: 118 MPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQD 177
+ + K S+ +++
Sbjct: 70 PEPILVPASQGKSLISGAPAAAVDQSMGSDVAAGTGSWSGKALSPGGWNDSTASTAVTRE 129
Query: 178 AIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRE 237
A + + + + + F+ + V + +++ G V G R L +
Sbjct: 130 AFPLYKVNPPPAYPQDARKRGFEGI-VILSIFVDESGRVKNLSVFTSSG-----YRTLDD 183
Query: 238 NARKAVI 244
+A KAV
Sbjct: 184 SALKAVK 190
>gi|320353835|ref|YP_004195174.1| putative chromosome segregation ATPase [Desulfobulbus propionicus
DSM 2032]
gi|320122337|gb|ADW17883.1| putative chromosome segregation ATPase [Desulfobulbus propionicus
DSM 2032]
Length = 850
Score = 39.5 bits (90), Expect = 0.46, Method: Composition-based stats.
Identities = 17/170 (10%), Positives = 42/170 (24%), Gaps = 3/170 (1%)
Query: 32 PISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKT 91
P ML+ + + + K + L + + R ++ +
Sbjct: 487 PAVAAPMLTPKLVEADKVRAPLDKTSLPRKEIKAKERERRLAPETNRPGFVPRERERGER 546
Query: 92 HATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDT 151
E K R + + ++ S E + +
Sbjct: 547 PRLPGENGEQREQKTIIPPVRDESNRDLRDQGPPDRDRDRLPRGENQTLRSPRETEQQER 606
Query: 152 VVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKK 201
V +P E ++ + R + +W + +R +
Sbjct: 607 VNRQPKVPERQQHPKELQPRPEQDASER---RQQFQRDWQLQQPQERQGQ 653
>gi|83720837|ref|YP_441920.1| TolA protein superfamily [Burkholderia thailandensis E264]
gi|257138091|ref|ZP_05586353.1| TolA protein superfamily [Burkholderia thailandensis E264]
gi|83654662|gb|ABC38725.1| TolA protein superfamily [Burkholderia thailandensis E264]
Length = 334
Score = 39.5 bits (90), Expect = 0.46, Method: Composition-based stats.
Identities = 28/209 (13%), Positives = 56/209 (26%), Gaps = 12/209 (5%)
Query: 62 VQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVS 121
V+ + Q ++ R +Q K + E ++ Q ++ +
Sbjct: 138 VEREKQKQAEKLKQQQQLAEQQRKLEQQKLEQQKLEQQKKQEQLAAQKKADAEKAAKAAA 197
Query: 122 PYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAI 181
+KE+ A+ + + + S S S
Sbjct: 198 AKANAAAKAKLDKERQ---ARLAQLQGMAGGGSGGGEGLAKSGTGTGSGGNAASPGYADK 254
Query: 182 VRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARK 241
VR RV N L + + G VL G + +
Sbjct: 255 VRRRVKPN---IVWAGERDSLVTVVAIRCTPSGDVLSTSIRRSSGNSGW-----DQAVIS 306
Query: 242 AVIKSQAFRLSPSTYKSWRNITLFFVPSK 270
A+ S + ++ IT+ F ++
Sbjct: 307 AIQASVPLP-PDTNGRTPSEITITFKAAE 334
>gi|27382905|ref|NP_774434.1| hypothetical protein blr7794 [Bradyrhizobium japonicum USDA 110]
gi|27356078|dbj|BAC53059.1| blr7794 [Bradyrhizobium japonicum USDA 110]
Length = 263
Score = 39.5 bits (90), Expect = 0.46, Method: Composition-based stats.
Identities = 13/89 (14%), Positives = 33/89 (37%), Gaps = 6/89 (6%)
Query: 166 EKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVV 225
++ + + A + + P++ + ++ F +++ G ++ +
Sbjct: 22 AQTDLQTERATAWKARLSAHIAGYRQFPAEALG-QTGEARVTFVIDRSGRLISQALAVST 80
Query: 226 GGTELVRRMLRENARKAVIKSQAFRLSPS 254
G R L A + V ++Q F PS
Sbjct: 81 GS-----RPLDVAALQIVARAQPFPAPPS 104
>gi|304436937|ref|ZP_07396901.1| TonB family domain protein [Selenomonas sp. oral taxon 149 str.
67H29BP]
gi|304370136|gb|EFM23797.1| TonB family domain protein [Selenomonas sp. oral taxon 149 str.
67H29BP]
Length = 268
Score = 39.5 bits (90), Expect = 0.47, Method: Composition-based stats.
Identities = 21/193 (10%), Positives = 50/193 (25%)
Query: 4 ENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQ 63
+S +HV+ LLL + + + + + E +
Sbjct: 8 RKAYIVSAAIHVVIFLLLAVGLAAVVAKQEQQVYEIDLQASDFSQGSGHEGGGSAESLFP 67
Query: 64 FKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPY 123
++E R +VQ+ + T + + ++ + +S+
Sbjct: 68 EPLKAEEVAKRVETVQQMPVPITPSTAAVPSPDAVTIPDAASPAASATDSSAAPSSSPSG 127
Query: 124 DKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVR 183
S + + + D + ++ + +A R
Sbjct: 128 SVSGTSGGGESGTGSGLGNGSGDSTGDGKGAGAGAGASQGSGDSTAPGTGTAPFDVAGFR 187
Query: 184 NRVIANWNIPSDF 196
V AN P
Sbjct: 188 AAVDANKEYPYMA 200
>gi|156555382|ref|XP_001605299.1| PREDICTED: similar to WOC protein, putative [Nasonia vitripennis]
Length = 1497
Score = 39.5 bits (90), Expect = 0.47, Method: Composition-based stats.
Identities = 22/170 (12%), Positives = 50/170 (29%), Gaps = 4/170 (2%)
Query: 38 MLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENE 97
+ ++ +D S + Q K ++ + V + D K+ E
Sbjct: 270 VEPMEVDSGKDKTSKSGSPKHDDNTQEKEKDTQSSDKTEEVIKKPDESEKSAKSPRDEAS 329
Query: 98 TKRSSSSKGE---QALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVV 154
SS + + ++ + P ++ + E D + +KK +
Sbjct: 330 KSSKESSDKKDGSTEVLPGQDDKLCIIPDSTKENKASDKDEVDESKSADMKKKDTEKEEA 389
Query: 155 RPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRV 204
K K K S+ ++ N N + + ++V
Sbjct: 390 TDGKANQDDKNSKESKNDKDVTGSVDSSENS-KENLKVAALTTGSNDIQV 438
>gi|331265755|ref|YP_004325385.1| endo-beta-N-acetylglucosaminidase [Streptococcus oralis Uo5]
gi|326682427|emb|CBZ00044.1| endo-beta-N-acetylglucosaminidase [Streptococcus oralis Uo5]
Length = 1563
Score = 39.5 bits (90), Expect = 0.47, Method: Composition-based stats.
Identities = 17/177 (9%), Positives = 35/177 (19%), Gaps = 10/177 (5%)
Query: 29 LLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQ 88
PIS D + ++ E Q + V +N
Sbjct: 79 AEQPISENTPAITDLVNEKEEAKPTPTDKAEKPAQPTEKEEVKPEEAPQVVDNKADKPSL 138
Query: 89 TKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKS 148
E ++ R K + N+ +
Sbjct: 139 ADVPKNEEKSLRPKEIKFDTWGDLLKWEPGAREDDP-------INRSSVELAKRHRGQLV 191
Query: 149 IDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVK 205
+ R + L + K+ + + W ++ L
Sbjct: 192 NEKASRRAKVQALANTNSKAKDHASVGGEE---FKAYAFDYWQYLDSMVFWEGLVPT 245
>gi|283955555|ref|ZP_06373050.1| putative periplasmic protein [Campylobacter jejuni subsp. jejuni
1336]
gi|283793016|gb|EFC31790.1| putative periplasmic protein [Campylobacter jejuni subsp. jejuni
1336]
Length = 259
Score = 39.5 bits (90), Expect = 0.47, Method: Composition-based stats.
Identities = 21/223 (9%), Positives = 68/223 (30%), Gaps = 16/223 (7%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
+++++++ ++L++F + + +I + + ++ + Q
Sbjct: 11 SFLLALVIYISIVILVFF------RLVSEVEPAIQYTDIKDSFVDIELAEPSKQVITQSN 64
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
+ + E + + + K S+ ++ +KE +
Sbjct: 65 TPKEIQKPTEQIDIEKLFAQTTNKTVKTEDIDQKASNFNELFGNIKEIQEEKTTKIQSSA 124
Query: 126 QKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNR 185
+ + K Q + + + + K+ + + V
Sbjct: 125 KSGISSAPKPQASELVKQLNDSLLQEESSTQGENTKAQKI-------GIYDEFLGKVVRI 177
Query: 186 VIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGT 228
+ W +K+ VK+ +++ G G +V+ G
Sbjct: 178 ITQRWTQYY--PNSEKISVKVKIFIDENGKF-GYTSVEKSGNP 217
>gi|195953153|ref|YP_002121443.1| hypothetical protein HY04AAS1_0778 [Hydrogenobaculum sp. Y04AAS1]
gi|195932765|gb|ACG57465.1| hypothetical protein HY04AAS1_0778 [Hydrogenobaculum sp. Y04AAS1]
Length = 249
Score = 39.5 bits (90), Expect = 0.47, Method: Composition-based stats.
Identities = 19/185 (10%), Positives = 59/185 (31%), Gaps = 6/185 (3%)
Query: 6 GLAISMILHVMFLLLLY-FNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQF 64
G +S+ +H+ F L N + + + +N S K E+ +
Sbjct: 10 GFLLSIFIHLSFFLFFIKINIPFKKPNKLIYISTIKQENNEKTPKKISNTHKNEKKHTKN 69
Query: 65 KGSSQENLVRDFSVQENGDRFSD-----QTKTHATENETKRSSSSKGEQALKESALLRMP 119
+ + ++ + + ++++ + T AT + +S++K + +
Sbjct: 70 QKTIKKPIPKAKNIKKTSLYTPNYNFTIPTTKEATLTPKQETSTTKTHSIVNTKTSSKEG 129
Query: 120 VSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAI 179
S + + + ++ S + + K + +S + ++
Sbjct: 130 SSKKSENQKKDQSKTKKPSNTPSNIKPSKEKAKSLPQMKPKNISTLGSYFDFLSYLENVF 189
Query: 180 AIVRN 184
+
Sbjct: 190 HYIHQ 194
>gi|115375535|ref|ZP_01462794.1| hypothetical protein STIAU_0558 [Stigmatella aurantiaca DW4/3-1]
gi|310818125|ref|YP_003950483.1| hypothetical protein STAUR_0852 [Stigmatella aurantiaca DW4/3-1]
gi|115367490|gb|EAU66466.1| hypothetical protein STIAU_0558 [Stigmatella aurantiaca DW4/3-1]
gi|309391197|gb|ADO68656.1| conserved uncharacterized protein [Stigmatella aurantiaca DW4/3-1]
Length = 407
Score = 39.5 bits (90), Expect = 0.47, Method: Composition-based stats.
Identities = 37/331 (11%), Positives = 82/331 (24%), Gaps = 81/331 (24%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREM-LSVDNI---------------- 44
RL S+++H + L LL + + ++VD +
Sbjct: 5 RLGRAALASLLIHGVLLALLSGSEQAPVRPRSPLASSPVAVDLVFVPPAPPAPQAPPSSS 64
Query: 45 ----------------------------YNEDYHSSKYKKIEEPVVQFKGSSQENLVRDF 76
+ + P V +S+ ++
Sbjct: 65 RPEGPPRPPRPSRPKPSPPAPPPSAPLPEVSPATPPEASPSDAPPVDAPVASKPLMLSPP 124
Query: 77 SVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKIS------- 129
++Q G + + S S A +E A + V + + K++
Sbjct: 125 ALQPGGPQPPSSEPSRGHTLRPGDPSLSPETLAAEELARVSARVQTFAESKLATVRVENG 184
Query: 130 ----------KATNKEQDLQGISFAEKKSIDTVVVRPDKK------ELLSKVEKSSRKRI 173
A K+ + + +K D+ + +
Sbjct: 185 LVDPYFGRVDTALEKQMENAPLFGGKKTLERMARAYQDQAARYGAGQETNTPRHERAAPT 244
Query: 174 PSQDAIAI---------VRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDV 224
S+ A+ +R V + + L V + Q G + V+
Sbjct: 245 ASERLEALSRGNPADNPMRAFVQGGEALQRFAESKSGLVVILEIQQAPDGQLQSVRVVES 304
Query: 225 VGGTELVRRMLRENARKAVIKSQAFRLSPST 255
G + + ++ A+ P
Sbjct: 305 SG-NKAFDAYVVDSVPPALAGLAP---PPEK 331
>gi|300023714|ref|YP_003756325.1| TonB family protein [Hyphomicrobium denitrificans ATCC 51888]
gi|299525535|gb|ADJ24004.1| TonB family protein [Hyphomicrobium denitrificans ATCC 51888]
Length = 325
Score = 39.5 bits (90), Expect = 0.49, Method: Composition-based stats.
Identities = 30/297 (10%), Positives = 67/297 (22%), Gaps = 49/297 (16%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIE--- 58
LA + +LH + + +L +SV + D S E
Sbjct: 24 NFWIALACAAVLHASLFIGAVNSKTKRLGAENGADNAISVSLVTEADLESRATVAEEPQP 83
Query: 59 --------------------EPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENET 98
Q + + + + E
Sbjct: 84 PPGPPPQPAQQPQPQQPPPQPEAKQEPQPPEPEPPKPEQQETKAEPAPQPEDVKPAEKPE 143
Query: 99 KRSSSSKGEQAL---------KESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSI 149
+ S + + + + + K K T + + + +
Sbjct: 144 LKESKQEDPDPIDDASDLLSLQNENPANVKSAEKPKPKPKAETETPKAAPKPAPKKPQKK 203
Query: 150 DTVVVRPDKKELLSKVEKSSRKRIPSQD-------AIAIVRNRVIANWNIPSDFKRFKKL 202
+ K L+ R + VI
Sbjct: 204 VASLDLSTPKNLMQPSFGGGRSAGLQRPPGITRSGLNDAFARGVIRALQQTMPQLVDING 263
Query: 203 RVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQ--AFRLSPSTYK 257
RV + L++ G V+ + + L + + V +Q ++ + P+
Sbjct: 264 RVTIRILLSETGNVVEVRLLSGAKNSTLNQDV--------VFAAQQTSYPIPPTGSN 312
>gi|190574843|ref|YP_001972688.1| putative TonB-like protein [Stenotrophomonas maltophilia K279a]
gi|190012765|emb|CAQ46394.1| putative TonB-like protein [Stenotrophomonas maltophilia K279a]
Length = 249
Score = 39.5 bits (90), Expect = 0.49, Method: Composition-based stats.
Identities = 22/239 (9%), Positives = 60/239 (25%), Gaps = 37/239 (15%)
Query: 27 VQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFS 86
+ P+ + L+ + + +
Sbjct: 40 WVAVPPMLPPP-------------------------EQDVRISLRLLAPATPPQPVEERQ 74
Query: 87 DQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEK 146
T + A + + + S + + S T ++ A
Sbjct: 75 ADTPSQAQQARASQPTKSPPPPKPTAAREGELAASET------GGTGRKPLPVAPPAAAT 128
Query: 147 KSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFK-RFKKLRVK 205
+ + S A + R+ P+ + R ++
Sbjct: 129 DASPAPASITAAPPAPDAPPADFQAGAASDQWEARLMARLERYRYYPAAARSRRQQGTAW 188
Query: 206 MHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPSTYKSWRNITL 264
+ ++++G +L G + ML + A + ++Q P K+ + + +
Sbjct: 189 VRASIDREGRLLALRLEQSSG-----QPMLDDAALQTFRRAQPLPPIPGELKAPQELVV 242
>gi|71734978|ref|YP_272496.1| ferric siderophore transporter, periplasmic energy transduction
protein TonB [Pseudomonas syringae pv. phaseolicola
1448A]
gi|71555531|gb|AAZ34742.1| ferric siderophore transporter, periplasmic energy transduction
protein TonB [Pseudomonas syringae pv. phaseolicola
1448A]
gi|320322266|gb|EFW78362.1| ferric siderophore transporter, periplasmic energy transduction
protein TonB [Pseudomonas syringae pv. glycinea str.
B076]
gi|320331914|gb|EFW87852.1| ferric siderophore transporter, periplasmic energy transduction
protein TonB [Pseudomonas syringae pv. glycinea str.
race 4]
gi|330873190|gb|EGH07339.1| ferric siderophore transporter, periplasmic energy transduction
protein TonB [Pseudomonas syringae pv. glycinea str.
race 4]
Length = 248
Score = 39.5 bits (90), Expect = 0.49, Method: Composition-based stats.
Identities = 15/148 (10%), Positives = 38/148 (25%), Gaps = 6/148 (4%)
Query: 108 QALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEK 167
+ ++ Q E + + + +P+K
Sbjct: 85 PKPEIVVPKKVEKPKPKPQPPKPQKKPEPPQEKPADEKPVDTPPTTAKPEKAAAPKPAPA 144
Query: 168 SSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKINVDVVG 226
+ + + + P D +R + ++ F ++ G VL + G
Sbjct: 145 PAPPSNALPSWQGDLLSHLSKYKKYPEDARRRGMQGVARLRFVVDADGNVLSYSIANSSG 204
Query: 227 GTELVRRMLRENARKAVIKSQAFRLSPS 254
L + + ++Q P
Sbjct: 205 S-----PALDRATMEMIRRAQPLPKPPK 227
>gi|148926910|ref|ZP_01810588.1| periplasmic protein [Campylobacter jejuni subsp. jejuni CG8486]
gi|218561792|ref|YP_002343571.1| putative periplasmic protein [Campylobacter jejuni subsp. jejuni
NCTC 11168]
gi|112359498|emb|CAL34282.1| putative periplasmic protein [Campylobacter jejuni subsp. jejuni
NCTC 11168]
gi|145844487|gb|EDK21595.1| periplasmic protein [Campylobacter jejuni subsp. jejuni CG8486]
gi|315926951|gb|EFV06313.1| periplasmic protein [Campylobacter jejuni subsp. jejuni DFVF1099]
gi|315930355|gb|EFV09436.1| periplasmic protein [Campylobacter jejuni subsp. jejuni 305]
Length = 259
Score = 39.5 bits (90), Expect = 0.49, Method: Composition-based stats.
Identities = 21/223 (9%), Positives = 68/223 (30%), Gaps = 16/223 (7%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
+++ +++ ++L++F + + +I + + ++ + Q
Sbjct: 11 SFLLALAIYISIVILVFF------RLVSEVEPAIQYTDIKDSFVDIELAEPSKQVITQSN 64
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
+ + E + + + K S+ ++ +KE +
Sbjct: 65 TPKEIQKPTEQIDIEKLFAQTTNKTVKTEDIDQKASNFNELFGNIKEIQEEKTTKIQSSA 124
Query: 126 QKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNR 185
+ + K Q + + + + ++K + + V
Sbjct: 125 KSGISSAPKPQASELVKQLNDSLLQE-------ESSTQGESTKAQKIGIYDEFLGKVVRI 177
Query: 186 VIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGT 228
+ W +K+ VK+ +++ G G +V+ G
Sbjct: 178 ITQRWTQYY--PNSEKISVKVKIFIDENGKF-GYTSVEKSGNP 217
>gi|57237118|ref|YP_178130.1| TonB domain-containing protein [Campylobacter jejuni RM1221]
gi|57165922|gb|AAW34701.1| TonB domain protein [Campylobacter jejuni RM1221]
gi|315057551|gb|ADT71880.1| TonB-like; putative TolA function [Campylobacter jejuni subsp.
jejuni S3]
Length = 259
Score = 39.5 bits (90), Expect = 0.50, Method: Composition-based stats.
Identities = 22/223 (9%), Positives = 68/223 (30%), Gaps = 16/223 (7%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
+++ ++V ++L++F + + +I + + ++ + Q
Sbjct: 11 SFLLALAIYVGIVILVFF------RLVSEVEPAIQYTDIKDSFVDIELAEPSKQVITQSN 64
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
+ + E + + + K S+ ++ +KE +
Sbjct: 65 TPKEIQKSTEQIDIEKLFAQTTNKTVKTEDIDQKASNFNELFGNIKEIQEEKTTKIQSSA 124
Query: 126 QKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNR 185
+ + K Q + + + + ++K + + V
Sbjct: 125 KSGISSAPKPQASELVKQLNDSLLQE-------ESSTQGESTKAQKIGIYDEFLGKVVRI 177
Query: 186 VIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGT 228
+ W +K+ VK+ +++ G G +V+ G
Sbjct: 178 ITQRWTQYY--PNSEKISVKVKIFIDENGKF-GYTSVEKSGNP 217
>gi|86149507|ref|ZP_01067737.1| TonB domain protein [Campylobacter jejuni subsp. jejuni CF93-6]
gi|85839775|gb|EAQ57034.1| TonB domain protein [Campylobacter jejuni subsp. jejuni CF93-6]
Length = 259
Score = 39.5 bits (90), Expect = 0.50, Method: Composition-based stats.
Identities = 21/223 (9%), Positives = 68/223 (30%), Gaps = 16/223 (7%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
+++ +++ ++L++F + +I + + ++ + Q
Sbjct: 11 SFLLALAIYISIVILVFFRLVS------EVEPAIQYTDIKDSFVDIELAEPSKQVITQSN 64
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
+ + E + + + K S+ ++ +KE +
Sbjct: 65 TPKEIQKPTEQVDIEKLFAQTTNKTVKTEDIDQKASNFNELFGNIKEIQEEKTTKIQSSA 124
Query: 126 QKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNR 185
+ + + K Q + + + + ++K + + V
Sbjct: 125 KLGASSAPKPQASELVKQLNDSLLQE-------ESSTQGESTKAQKIGIYDEFLGKVVRI 177
Query: 186 VIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGT 228
+ W +K+ VK+ +++ G G +V+ G
Sbjct: 178 ITQRWTQYY--PNSEKISVKVKIFIDENGKF-GYTSVEKSGNP 217
>gi|145297813|ref|YP_001140654.1| tolA protein [Aeromonas salmonicida subsp. salmonicida A449]
gi|142850585|gb|ABO88906.1| tolA protein [Aeromonas salmonicida subsp. salmonicida A449]
Length = 388
Score = 39.5 bits (90), Expect = 0.50, Method: Composition-based stats.
Identities = 16/149 (10%), Positives = 50/149 (33%), Gaps = 4/149 (2%)
Query: 7 LAISMILHVMFLLLLYFNFNVQLLVPIS----RREMLSVDNIYNEDYHSSKYKKIEEPVV 62
L S++LH++ ++L + + +D + + ++ +P
Sbjct: 11 LIASLLLHLIVGIILLVGVDFSKPKRPESKGQIVNAVMLDENFLNEQAKQIQQQKSQPKP 70
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
Q Q+ D + +E + + E + ++ + K+ A +
Sbjct: 71 QKVEKEQDKEDTDLAKRELAQQQERLRIAESKRKEAEEATRKAEAEKQKKVAEQKQAEEK 130
Query: 123 YDKQKISKATNKEQDLQGISFAEKKSIDT 151
K + ++ +++ S + ++
Sbjct: 131 AQKAEEARKLEEQKTKTAESERKAAEAES 159
Score = 37.6 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 16/140 (11%), Positives = 45/140 (32%), Gaps = 12/140 (8%)
Query: 132 TNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWN 191
+++ + +K+ D + + + S+ + A+++ V
Sbjct: 258 AERKRKAAEQAKLQKEMEDMMQQQLAAEANARSQAASAAAQGEVDKYAALIKATVERYMI 317
Query: 192 IPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRL 251
+ + + +L GFV+ + + + AV+K+ +
Sbjct: 318 LDPTMRGK---TCTIGVRLASTGFVISV-------DNGQGDPAVCRSGKAAVLKANQLPV 367
Query: 252 S--PSTYKSWRNITLFFVPS 269
P+ ++ + L PS
Sbjct: 368 PKDPAAFEMLKEFNLKLEPS 387
>gi|313202021|ref|YP_004040679.1| tonb family protein [Methylovorus sp. MP688]
gi|312441337|gb|ADQ85443.1| TonB family protein [Methylovorus sp. MP688]
Length = 257
Score = 39.5 bits (90), Expect = 0.51, Method: Composition-based stats.
Identities = 16/154 (10%), Positives = 38/154 (24%), Gaps = 4/154 (2%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPV 61
RL+ L IS+ +H + + ++L ++ + P
Sbjct: 14 RLQWALIISIAVHAILIW----QLPNLKFDSPPEPQVLQIELAPPVKKQQETPAEAPAPA 69
Query: 62 VQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVS 121
+ + + S + E + S E+ +
Sbjct: 70 PEPPKPEPVVKPEVKPQPKPVIKPSPEVAPPPVERKPDPSPPVMTATPQPEAPKAETAPA 129
Query: 122 PYDKQKISKATNKEQDLQGISFAEKKSIDTVVVR 155
P A + +S ++ +D
Sbjct: 130 PAPVAATQPAPAAPAEPPKVSATSQQDLDAAKNE 163
>gi|194754058|ref|XP_001959322.1| GF12103 [Drosophila ananassae]
gi|190620620|gb|EDV36144.1| GF12103 [Drosophila ananassae]
Length = 843
Score = 39.5 bits (90), Expect = 0.51, Method: Composition-based stats.
Identities = 17/160 (10%), Positives = 46/160 (28%), Gaps = 1/160 (0%)
Query: 26 NVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRF 85
+PI +++ ++ +EP K + NL
Sbjct: 477 PPLPPLPIDEVHPAPIESDNAPSEPKKPVEEPQEPAPDAKPNDV-NLPAGKPKAIPPPVL 535
Query: 86 SDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAE 145
T+ E+ +S++ A+K+ + K + +++L+
Sbjct: 536 PAPTEAAKKESNLLVASNTIDGAAIKKEEEVAAEEQKESKASADELLKTQKELKETKKLL 595
Query: 146 KKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNR 185
K++ + K + ++ ++ N
Sbjct: 596 AKTVGELNEELAKNNVPLGQVLEKKEDPKKNPTNELLENE 635
>gi|297668953|ref|XP_002812681.1| PREDICTED: LOW QUALITY PROTEIN: titin-like [Pongo abelii]
Length = 33447
Score = 39.5 bits (90), Expect = 0.52, Method: Composition-based stats.
Identities = 4/77 (5%), Positives = 15/77 (19%)
Query: 49 YHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQ 108
+K ++ + V K S + + + +
Sbjct: 10029 APPAKVPEVPKKPVPEKKVSVPAPKKVEAPPAKVPEVPKKLIPEEKKPTPVPKKVEAPPP 10088
Query: 109 ALKESALLRMPVSPYDK 125
+ + +
Sbjct: 10089 KVPKKREPVPVPVALPQ 10105
Score = 38.0 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 10/116 (8%), Positives = 23/116 (19%)
Query: 29 LLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQ 88
VP E + V E +K ++ + V + + + +
Sbjct: 9981 PEVPKKPEEKVPVLIPKKEKPPPAKVPEVPKKPVPEEKVPVPVPKKVEAPPAKVPEVPKK 10040
Query: 89 TKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFA 144
+ + E +P K +
Sbjct: 10041 PVPEKKVSVPAPKKVEAPPAKVPEVPKKLIPEEKKPTPVPKKVEAPPPKVPKKREP 10096
Score = 38.0 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 5/81 (6%), Positives = 15/81 (18%)
Query: 53 KYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKE 112
+ ++ V + E + + K+
Sbjct: 10279 PEVIKKAVPEAPTPVPKKVEAPPAKVPKKIPEEKVPVPVQKKEAPPAKVPEVPKKVPEKK 10338
Query: 113 SALLRMPVSPYDKQKISKATN 133
+ + P K +
Sbjct: 10339 VLVPKKEAVPPAKGRTVLEEK 10359
Score = 35.6 bits (80), Expect = 8.2, Method: Composition-based stats.
Identities = 10/119 (8%), Positives = 31/119 (26%), Gaps = 10/119 (8%)
Query: 37 EMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDR----------FS 86
E++ + + + P V ++ + +
Sbjct: 10540 EVVPEKKVPVAPPKKPEVPPTKVPEVPKAAVPEKKVPEAIPPKPESPPPEVPEAPKEVVP 10599
Query: 87 DQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAE 145
++ A + + E + ++PV+P K ++ E + +
Sbjct: 10600 EKKVPAAPPKKPEVPPVKVPEAPKEVVPEKKVPVAPPKKPEVPPTKVPEVPKAAVPEKK 10658
>gi|330952138|gb|EGH52398.1| TonB [Pseudomonas syringae Cit 7]
Length = 183
Score = 39.5 bits (90), Expect = 0.53, Method: Composition-based stats.
Identities = 16/148 (10%), Positives = 38/148 (25%), Gaps = 6/148 (4%)
Query: 108 QALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEK 167
+ ++ Q E + + + +P+K
Sbjct: 20 PKPEIVVPKKVEKPKPKPQPPKPQKKPEPPKEKPADEKPVDTPPTTAQPEKPVAPKPAPA 79
Query: 168 SSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKINVDVVG 226
S + + + P D +R + ++ F ++ G VL + G
Sbjct: 80 PSPPSNALPNWQGDLLGHLSKYKKYPEDARRRGMQGVARLRFVVDADGNVLSYSIANSSG 139
Query: 227 GTELVRRMLRENARKAVIKSQAFRLSPS 254
L + + ++Q P
Sbjct: 140 S-----PSLDRATMEMIRRAQPLPKPPK 162
>gi|149639731|ref|XP_001515433.1| PREDICTED: similar to titin [Ornithorhynchus anatinus]
Length = 17260
Score = 39.5 bits (90), Expect = 0.53, Method: Composition-based stats.
Identities = 12/115 (10%), Positives = 26/115 (22%), Gaps = 1/115 (0%)
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRM-PVSPYD 124
++ + + + E + P +
Sbjct: 6490 RKPAPVPKKEAAPPAKVPEVPKKPVPEEKIPVPVVKREEPPPVKVPEVPRKKKVQEVPEE 6549
Query: 125 KQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAI 179
+ I + + + A+K + V P K SR S+ I
Sbjct: 6550 TRPIPPKREEAPPAKVPAVAKKTVPEEEVQVPVPVSKKEKAAPPSRVAEKSKKTI 6604
>gi|78222845|ref|YP_384592.1| TonB-like [Geobacter metallireducens GS-15]
gi|78194100|gb|ABB31867.1| TonB-like protein [Geobacter metallireducens GS-15]
Length = 235
Score = 39.5 bits (90), Expect = 0.53, Method: Composition-based stats.
Identities = 23/254 (9%), Positives = 53/254 (20%), Gaps = 59/254 (23%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIY-NEDYHSSKYKKIEEPVVQF 64
L +S+ LH+ F L F +L ++ ++ VD
Sbjct: 18 TLVLSLALHLSFAALASL-FPGRLTG-LASESIVMVDLTDAAAPLTKPPVGATAVQRPVS 75
Query: 65 KGSSQENLVR-DFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPY 123
Q L + + +T S
Sbjct: 76 PAQKQMVLPTHEEKALPEPSPTPMEELPPPVPPQTSVS---------------------- 113
Query: 124 DKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVR 183
++ + S + + + + +V
Sbjct: 114 ---------------------------SLSDGLTRGFFRSLADGETLRGDVREYYFELVE 146
Query: 184 NRVIANWNIPSD-FKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKA 242
W+ S + + + + G +L + G +
Sbjct: 147 RVNEQWWDAASGTGMEPGRQEALVTITVRKNGELLDVRLIRSSGNDQ-----YDRLIMDT 201
Query: 243 VIKSQAFRLSPSTY 256
+ + P +Y
Sbjct: 202 LQAASNLPPLPDSY 215
>gi|289625457|ref|ZP_06458411.1| ferric siderophore transporter, periplasmic energy transduction
protein TonB [Pseudomonas syringae pv. aesculi str.
NCPPB3681]
gi|330866516|gb|EGH01225.1| ferric siderophore transporter, periplasmic energy transduction
protein TonB [Pseudomonas syringae pv. aesculi str.
0893_23]
gi|330890914|gb|EGH23575.1| ferric siderophore transporter, periplasmic energy transduction
protein TonB [Pseudomonas syringae pv. mori str. 301020]
gi|330986879|gb|EGH84982.1| ferric siderophore transporter, periplasmic energy transduction
protein TonB [Pseudomonas syringae pv. lachrymans str.
M301315]
Length = 248
Score = 39.5 bits (90), Expect = 0.53, Method: Composition-based stats.
Identities = 15/148 (10%), Positives = 38/148 (25%), Gaps = 6/148 (4%)
Query: 108 QALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEK 167
+ ++ Q E + + + +P+K
Sbjct: 85 PKPEIVVPKKVEKPKPKPQPPKPQKKPEPPQEKPADEKPVDTPPTTAKPEKAAAPKPAPA 144
Query: 168 SSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKINVDVVG 226
+ + + + P D +R + ++ F ++ G VL + G
Sbjct: 145 PAPPSNALPSWQGDLLSHLGKYKKYPEDARRRGMQGVARLRFVVDADGNVLSYSIANSSG 204
Query: 227 GTELVRRMLRENARKAVIKSQAFRLSPS 254
L + + ++Q P
Sbjct: 205 S-----PALDRATMEMIRRAQPLPKPPK 227
>gi|257455819|ref|ZP_05621045.1| TonB family protein [Enhydrobacter aerosaccus SK60]
gi|257446833|gb|EEV21850.1| TonB family protein [Enhydrobacter aerosaccus SK60]
Length = 371
Score = 39.5 bits (90), Expect = 0.53, Method: Composition-based stats.
Identities = 17/170 (10%), Positives = 42/170 (24%), Gaps = 5/170 (2%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYK----KIEEPV 61
L + LH + + N + P L + I + + ++P+
Sbjct: 30 ALIGVLSLHGIV-AISLANMATPDIKPPKVTPPLEISFIAPPPAPAKPEEMTVTAEQQPI 88
Query: 62 VQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVS 121
Q ++ + + +K E + + L P
Sbjct: 89 KQLPKPVEKPKEKLAEKPKEKPIEKPISKPIEKTVEKPIPQPIAKKHVEQPIKPLPEPSK 148
Query: 122 PYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRK 171
P +K + + + A + + + + K
Sbjct: 149 PAEKPIVKPPQVDQDIVMARQLALANERAEQAQKQQLEHQQALARQQDLK 198
>gi|78776843|ref|YP_393158.1| TonB-like [Sulfurimonas denitrificans DSM 1251]
gi|78497383|gb|ABB43923.1| TonB-like protein [Sulfurimonas denitrificans DSM 1251]
Length = 233
Score = 39.5 bits (90), Expect = 0.53, Method: Composition-based stats.
Identities = 18/158 (11%), Positives = 51/158 (32%), Gaps = 2/158 (1%)
Query: 1 MRLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREM-LSVDNIYNEDYHSSKYKKIEE 59
+R N IS+ +H + ++ ++F + V +++ L++ I ++ EE
Sbjct: 2 IRHSNSFFISLFIHALLIIFIFFMSKSYIEVKEEEQKIALNISMIEFQEKTQEIETPKEE 61
Query: 60 P-VVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRM 118
+ + + + ++ V E + + + + + L
Sbjct: 62 VCLPKESPKKIKEIKKERKVVEKKAKEEIVQEKKVENIVEVKKEQITQNRDIVPVKQLDE 121
Query: 119 PVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRP 156
K S+ + + S + I ++
Sbjct: 122 TPKQIQKTAPSEPLKQPSPQEEYSEINSQKILELLREN 159
>gi|260828396|ref|XP_002609149.1| hypothetical protein BRAFLDRAFT_131371 [Branchiostoma floridae]
gi|229294504|gb|EEN65159.1| hypothetical protein BRAFLDRAFT_131371 [Branchiostoma floridae]
Length = 689
Score = 39.5 bits (90), Expect = 0.54, Method: Composition-based stats.
Identities = 14/153 (9%), Positives = 37/153 (24%), Gaps = 3/153 (1%)
Query: 12 ILHVMFLLLLYFNFNVQLLVPISRREML---SVDNIYNEDYHSSKYKKIEEPVVQFKGSS 68
+HV L N +P + + N+ + + ++PV +
Sbjct: 295 TIHVTELRKNGVNMLWPEWLPPPPSKSADKKPTKPLQNQPVPAKQPVPAKQPVPAKQPVK 354
Query: 69 QENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKI 128
+ V + + + + + + + +
Sbjct: 355 TKQPVPAKQPVKTKQPVPAKQPVKTKQPVPAKQPVPAKQPVPAKQPVPAKQPVKTKQPVP 414
Query: 129 SKATNKEQDLQGISFAEKKSIDTVVVRPDKKEL 161
+K K + K +P K +
Sbjct: 415 AKQPVKTKQPVPAKQPVKTKQPVPAKQPVKTKQ 447
>gi|261840055|gb|ACX99820.1| TonB-like protein [Helicobacter pylori 52]
Length = 279
Score = 39.5 bits (90), Expect = 0.54, Method: Composition-based stats.
Identities = 31/253 (12%), Positives = 70/253 (27%), Gaps = 11/253 (4%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
IS L+ + YF + P+++ V +S K E +
Sbjct: 18 SFLISFALYA--IGFGYFLLREEAPTPLAQAGTTKVTMSLASINTNSNTKTNAESAKPKE 75
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
++ + +E S + + K + + + P ++
Sbjct: 76 EPKEKPKKEEPKKEEPKKEVSKPKPKPKPKPKPKPKPKPEPKPKPEPKVEEVKKEEPKEE 135
Query: 126 QKISKATNKEQDLQGISFAEKK---SIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIV 182
K +A + ++ K +K + E + S + + +
Sbjct: 136 PKKEEAKEEAKEKSAPKQVTTKDIVKEKDKQEESNKTSEGATSEAQAYNPGVSNEFLMKI 195
Query: 183 RNRVIANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARK 241
+ + + P + + V + F +N G V V +L A
Sbjct: 196 QTAISSKNRYPKMAQIRGIEGEVLVSFVINPDGSVTDIKVVKSNTTD-----ILNHAALD 250
Query: 242 AVIKSQAFRLSPS 254
A+ + P
Sbjct: 251 AIKNAAHLFPKPE 263
>gi|195489517|ref|XP_002092772.1| GE14379 [Drosophila yakuba]
gi|194178873|gb|EDW92484.1| GE14379 [Drosophila yakuba]
Length = 2290
Score = 39.5 bits (90), Expect = 0.55, Method: Composition-based stats.
Identities = 13/165 (7%), Positives = 41/165 (24%), Gaps = 2/165 (1%)
Query: 35 RREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHAT 94
+ SV + + E + + S +
Sbjct: 1389 EPPVASVQ--KEKPKEPLPAQPSEVSQKPPEIERVKKTETPVSNPPSNRTDVSSHVEQPA 1446
Query: 95 ENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVV 154
+ K + KE+ ++ ++ + + K +
Sbjct: 1447 QPPVKAAPEKVEHPMAKEAVDIKDKAIKKAVPEVPVVKPEASSCEKKIDPSKTKVVLEKE 1506
Query: 155 RPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRF 199
+ L +V++ + + A +R+++ N + +
Sbjct: 1507 CIKSDQQLVQVKEEEKLNARAPSAPIPIRDKIQLKGNEHAQLQNS 1551
>gi|184159155|ref|YP_001847494.1| Type V secretory pathway, adhesin AidA [Acinetobacter baumannii
ACICU]
gi|332875983|ref|ZP_08443769.1| protein TolA [Acinetobacter baumannii 6014059]
gi|183210749|gb|ACC58147.1| Type V secretory pathway, adhesin AidA [Acinetobacter baumannii
ACICU]
gi|323519049|gb|ADX93430.1| Type V secretory pathway, adhesin AidA [Acinetobacter baumannii
TCDC-AB0715]
gi|332735849|gb|EGJ66890.1| protein TolA [Acinetobacter baumannii 6014059]
Length = 448
Score = 39.5 bits (90), Expect = 0.55, Method: Composition-based stats.
Identities = 23/208 (11%), Positives = 60/208 (28%), Gaps = 8/208 (3%)
Query: 47 EDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKG 106
+ ++ + + Q+ + + + A + K + +K
Sbjct: 232 DAKRKAEADAKAKQQAADNAKRKAEADAKAKQQKAAEDAKRKAEADAKAKQQKAAEDAKR 291
Query: 107 EQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVE 166
+ A + ++ + A K+Q + + + KK +
Sbjct: 292 KAEADAKAKQQKAAEDAKRKAEADAKAKQQKAAEDARRKAEIEAEEKAASAKKAQEEAAQ 351
Query: 167 KSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVG 226
K + + A ++ W++P+ V + F L+ G V + G
Sbjct: 352 KKGEAKKIASSAKRDFEQKIRRAWDVPTGSSGK---TVSVRFTLSDSGSVSSIVITRSSG 408
Query: 227 GTELVRRMLRENARKAVIKSQAFRLSPS 254
L + + A+ S + +
Sbjct: 409 DD-----ALDASIKAAIQASAPYPMPSD 431
>gi|307320287|ref|ZP_07599705.1| protein of unknown function DUF930 [Sinorhizobium meliloti AK83]
gi|306894009|gb|EFN24777.1| protein of unknown function DUF930 [Sinorhizobium meliloti AK83]
Length = 313
Score = 39.5 bits (90), Expect = 0.55, Method: Composition-based stats.
Identities = 12/149 (8%), Positives = 37/149 (24%)
Query: 33 ISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTH 92
++ + +SV+ + +K + E + E +
Sbjct: 40 PAKEQSVSVELVPQPKSAEKPEQKPNAAKSEQARPQPEAFESAAAPAEKEKPPQPELPPA 99
Query: 93 ATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTV 152
A + S + + + P + + + A+ +
Sbjct: 100 APKKTETPSETPEASRPAPAKTENTASEKPAESRTALAELRVDARSAANEAADAATAPPA 159
Query: 153 VVRPDKKELLSKVEKSSRKRIPSQDAIAI 181
P +K +L + + ++
Sbjct: 160 AAVPQEKPVLEEARAEPTQPPEAKAEREA 188
>gi|10945152|emb|CAC14221.1| YapB protein [Yersinia pestis]
Length = 1052
Score = 39.5 bits (90), Expect = 0.55, Method: Composition-based stats.
Identities = 27/243 (11%), Positives = 75/243 (30%), Gaps = 14/243 (5%)
Query: 4 ENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIY----NEDYHSSKYKKIEE 59
L +S+++ + + P + + V + + K
Sbjct: 9 TRLLPLSILI-SALIPAAVLAAPSVAIPPPVQDLINQVQSYANAHVISPEQAETLIKRLT 67
Query: 60 PVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMP 119
+ + + ++ + E + ++ + + + + + +Q K +A
Sbjct: 68 VTPEKLKEEEARVKQELAAVEKKQKEANTEIITTSIEKDQFNKALNNKQKAKLAAETVFI 127
Query: 120 VSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAI 179
+ + + KA NK L + + K S+ + L K++ + I Q+ +
Sbjct: 128 NANSKQNEAIKAVNKNWSLADENISTKLSVIVNGESKTQAILAEKIKLTETANINQQEQV 187
Query: 180 AIVRN---RVIANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRML 235
+ + N + D K + + +L Q + ++ + L
Sbjct: 188 IKAQQLDTEIQKNQSELDDAINNKTTGTIVLQEKLTQ-----AETKLETAKNNPKSKLSL 242
Query: 236 REN 238
E
Sbjct: 243 AEA 245
>gi|317181063|dbj|BAJ58849.1| siderophore-mediated iron transport protein [Helicobacter pylori
F32]
Length = 283
Score = 39.5 bits (90), Expect = 0.56, Method: Composition-based stats.
Identities = 30/257 (11%), Positives = 72/257 (28%), Gaps = 15/257 (5%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
IS L+ + YF + + P+++ V +S K E +
Sbjct: 18 SFLISFALYA--IGFGYFLLHEEAPTPLAQAGTTKVTMSLASINTNSNTKTNAESAKPKE 75
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
++ + +E S + + K + + + ++ ++
Sbjct: 76 EPKEKPKKEEPKKEEPKKEVSKPKPKPKPKPKPKPKPKPEPKPKPEPKPEPKVEEVKKEE 135
Query: 126 QKISKATNKEQDLQGISFAEKK-------SIDTVVVRPDKKELLSKVEKSSRKRIPSQDA 178
K + ++ A K+ +K + E + S +
Sbjct: 136 PKEEPKKEEAKEEAKEKSAPKQVTTKDIVKEKDKQEESNKTSEGATSEAQAYNPGVSNEF 195
Query: 179 IAIVRNRVIANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRE 237
+ ++ + + P + + V + F +N G V V +L
Sbjct: 196 LMKIQTAISSKNRYPKMAQIRGIEGEVLVSFVINPDGSVTDIKVVKSNTTD-----ILNH 250
Query: 238 NARKAVIKSQAFRLSPS 254
A A+ + P
Sbjct: 251 AALDAIKNAAHLFPKPE 267
>gi|209550275|ref|YP_002282192.1| hypothetical protein Rleg2_2695 [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209536031|gb|ACI55966.1| protein of unknown function DUF930 [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 356
Score = 39.5 bits (90), Expect = 0.56, Method: Composition-based stats.
Identities = 17/158 (10%), Positives = 40/158 (25%), Gaps = 1/158 (0%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
+ G+ +S++LHV + LL F P E + V+ + + + K E+P
Sbjct: 22 IRWGVVVSVLLHVPLVALLIFGLPKIEPKPA-EDESVKVELVPPPEEKKPEPKPEEKPPE 80
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
+ + K S + +
Sbjct: 81 PKPPEQAKKAPPPPPPPPPPPPRPAENKPSEQAKSAAPMPSLNPVFEFGDRDSGPKKSTS 140
Query: 123 YDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKE 160
+ + + G + + + +
Sbjct: 141 GNSSQGEVKSATTAPQHGAKPEQAPAEASGEKPQTETP 178
>gi|198474676|ref|XP_001356778.2| GA13348 [Drosophila pseudoobscura pseudoobscura]
gi|198138496|gb|EAL33844.2| GA13348 [Drosophila pseudoobscura pseudoobscura]
Length = 640
Score = 39.5 bits (90), Expect = 0.57, Method: Composition-based stats.
Identities = 14/96 (14%), Positives = 28/96 (29%), Gaps = 1/96 (1%)
Query: 31 VPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTK 90
PI ++ E + K IE + + E V + E D +
Sbjct: 266 KPIETNPKEPIETTPEEPIETIPEKPIETNPKEPIETIPEEPV-ETIPGEPIDTNPKEPI 324
Query: 91 THATENETKRSSSSKGEQALKESALLRMPVSPYDKQ 126
E T+ ++ + V+P+ +
Sbjct: 325 ETIPEEPTEITTEADTADGTSNKTTELKTVTPHPPE 360
>gi|149376648|ref|ZP_01894407.1| TPR repeat protein [Marinobacter algicola DG893]
gi|149359021|gb|EDM47486.1| TPR repeat protein [Marinobacter algicola DG893]
Length = 356
Score = 39.5 bits (90), Expect = 0.57, Method: Composition-based stats.
Identities = 12/153 (7%), Positives = 48/153 (31%), Gaps = 1/153 (0%)
Query: 31 VPISRREMLSVDNIYNEDYHSSKYK-KIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQT 89
P+ M+ + + + + + P +++ +++ + ++ + S +
Sbjct: 74 KPVPSPAMVEPEPVQIQSTTPQTLASQNQAPEPLPPETTEPDIMEPDTAKQVPAQTSPVS 133
Query: 90 KTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSI 149
E E + + E +++A+ + P ++T +E +
Sbjct: 134 VAKREELEPSSTETETQEAEPEQTAITDVKQVPETPAATDRSTARELQKLVAQGRITDAE 193
Query: 150 DTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIV 182
+ +++ +R + +
Sbjct: 194 RRLAALTREQDAPRSRYVVARALLVDGKQDQAL 226
>gi|307130418|ref|YP_003882434.1| Ferric siderophore transport system, periplasmic binding protein
TonB [Dickeya dadantii 3937]
gi|306527947|gb|ADM97877.1| Ferric siderophore transport system, periplasmic binding protein
TonB [Dickeya dadantii 3937]
Length = 333
Score = 39.5 bits (90), Expect = 0.57, Method: Composition-based stats.
Identities = 17/203 (8%), Positives = 44/203 (21%), Gaps = 18/203 (8%)
Query: 42 DNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRS 101
+ + + + ++ +E +
Sbjct: 121 TLVPPRPLPVTIEFAAAPAEATPAEAIPPESILSQTMPSQTMPPEPPPAVEPPVDEQALT 180
Query: 102 SSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKEL 161
+ + + +A+ +K + + S +
Sbjct: 181 PPPQPTRINETAAVKTPKPVKPIAKKPATPRQPSAPAPQSAPVNTASTAPAATPAATAPV 240
Query: 162 LSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKIN 221
++ R P + + W + V ++ Q+ G V
Sbjct: 241 TPPSASAAYLRNPPPAYPDV---AINRGW----------EGTVLLNVQVRPDGKVQTIRL 287
Query: 222 VDVVGGTELVRRMLRENARKAVI 244
G L + AR+AV
Sbjct: 288 QRSSG-----YPTLDDAAREAVQ 305
>gi|322700572|gb|EFY92326.1| MYB DNA-binding domain protein [Metarhizium acridum CQMa 102]
Length = 496
Score = 39.1 bits (89), Expect = 0.58, Method: Composition-based stats.
Identities = 9/174 (5%), Positives = 42/174 (24%), Gaps = 6/174 (3%)
Query: 26 NVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQ------ 79
+ P++ + + + + ++ + ++ +
Sbjct: 294 PTPVQPPMNVPQPPNASASQQQAATPTPTQQSRQRKRPAPNTAPSPATGAPAAPVAGSQA 353
Query: 80 ENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQ 139
+ + + + + + ++ + + + + +D
Sbjct: 354 QPPALTPPTPQAAPSTLQPQAPTEDAKTTPVQPPPAKKSRTNTPWTPQEELRLKQMRDSG 413
Query: 140 GISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIP 193
K+ T KK + + SQ + ++ W +
Sbjct: 414 NSWAEIAKTFPTRTEGSVKKHWYKDMHYAEFAEDESQALLNAIKEYENNKWKVI 467
>gi|153005388|ref|YP_001379713.1| TonB family protein [Anaeromyxobacter sp. Fw109-5]
gi|152028961|gb|ABS26729.1| TonB family protein [Anaeromyxobacter sp. Fw109-5]
Length = 393
Score = 39.1 bits (89), Expect = 0.58, Method: Composition-based stats.
Identities = 20/216 (9%), Positives = 55/216 (25%), Gaps = 20/216 (9%)
Query: 49 YHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQ 108
+ + + E G+S + + ++ +
Sbjct: 153 EAAGEGGRAERRTEAKDGTSGQRGTGAERARAARQEQQEKLALAPGPGGEIPPQQGRERV 212
Query: 109 ALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKS 168
A+ P ++ + + + ++ ++ ++ + +
Sbjct: 213 DGVAPAIPGAPGDGAERLQGPTRPDLSVGREALARLAGGPNMDGYGEAEEGDVTALNTRE 272
Query: 169 SRKRIPSQDAIAIVRNRVIANWNIPSDFK-----------RFKKLRVKMHFQLNQKGFVL 217
+ VR + A+W +K+ V + L++ G V
Sbjct: 273 FKYAT----FFNQVRREIGADWYPRVRAAVRERDPEFKHFFYKERTVVVGVTLDRAGHVT 328
Query: 218 GKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSP 253
G + A +V ++Q F P
Sbjct: 329 GLSVLQSS-----NVDFFDRVAMTSVRQAQPFPNPP 359
>gi|119908535|ref|XP_591419.3| PREDICTED: spen homolog, transcriptional regulator [Bos taurus]
Length = 3652
Score = 39.1 bits (89), Expect = 0.58, Method: Composition-based stats.
Identities = 13/148 (8%), Positives = 34/148 (22%)
Query: 29 LLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQ 88
P + SVD + D V + + + +
Sbjct: 1714 AEPPSTVERGSSVDQLPYLDAKPPTPGASFSQVEISVDPEPNSTQTLPKPTQKPEEADEP 1773
Query: 89 TKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKS 148
++S+ + + E V D +K + + + + +
Sbjct: 1774 QVEKPDLAANVEPNTSQKTEDVPEVPPPATEVVEVDPPVAAKDKKPNKSKRSKTPIQAAA 1833
Query: 149 IDTVVVRPDKKELLSKVEKSSRKRIPSQ 176
K E + + + +
Sbjct: 1834 ASVEKPVTRKSERIDREKLKRSNSPRGE 1861
Score = 36.0 bits (81), Expect = 5.9, Method: Composition-based stats.
Identities = 15/174 (8%), Positives = 35/174 (20%), Gaps = 13/174 (7%)
Query: 25 FNVQLLVPISRREMLSVDNIYNEDYHSSKYK-KIEEPVVQFKGSSQENLV---------- 73
P + S I + +S + Q
Sbjct: 1729 LPYLDAKPPTPGASFSQVEISVDPEPNSTQTLPKPTQKPEEADEPQVEKPDLAANVEPNT 1788
Query: 74 --RDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKA 131
+ V E ++ + + + A P ++
Sbjct: 1789 SQKTEDVPEVPPPATEVVEVDPPVAAKDKKPNKSKRSKTPIQAAAASVEKPVTRKSERID 1848
Query: 132 TNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNR 185
K + +K ++ + SK + + + R R
Sbjct: 1849 REKLKRSNSPRGEAQKLLELKMEAEKITRTASKNSATDPEHPEPSLPLGRTRRR 1902
>gi|297484241|ref|XP_002694185.1| PREDICTED: spen homolog, transcriptional regulator (Drosophila) [Bos
taurus]
gi|296479096|gb|DAA21211.1| spen homolog, transcriptional regulator [Bos taurus]
Length = 3652
Score = 39.1 bits (89), Expect = 0.58, Method: Composition-based stats.
Identities = 13/148 (8%), Positives = 34/148 (22%)
Query: 29 LLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQ 88
P + SVD + D V + + + +
Sbjct: 1714 AEPPSTVERGSSVDQLPYLDAKPPTPGASFSQVEISVDPEPNSTQTLPKPTQKPEEADEP 1773
Query: 89 TKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKS 148
++S+ + + E V D +K + + + + +
Sbjct: 1774 QVEKPDLAANVEPNTSQKTEDVPEVPPPATEVVEVDPPVAAKDKKPNKSKRSKTPIQAAA 1833
Query: 149 IDTVVVRPDKKELLSKVEKSSRKRIPSQ 176
K E + + + +
Sbjct: 1834 ASVEKPVTRKSERIDREKLKRSNSPRGE 1861
Score = 36.0 bits (81), Expect = 6.0, Method: Composition-based stats.
Identities = 15/174 (8%), Positives = 35/174 (20%), Gaps = 13/174 (7%)
Query: 25 FNVQLLVPISRREMLSVDNIYNEDYHSSKYK-KIEEPVVQFKGSSQENLV---------- 73
P + S I + +S + Q
Sbjct: 1729 LPYLDAKPPTPGASFSQVEISVDPEPNSTQTLPKPTQKPEEADEPQVEKPDLAANVEPNT 1788
Query: 74 --RDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKA 131
+ V E ++ + + + A P ++
Sbjct: 1789 SQKTEDVPEVPPPATEVVEVDPPVAAKDKKPNKSKRSKTPIQAAAASVEKPVTRKSERID 1848
Query: 132 TNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNR 185
K + +K ++ + SK + + + R R
Sbjct: 1849 REKLKRSNSPRGEAQKLLELKMEAEKITRTASKNSATDPEHPEPSLPLGRTRRR 1902
>gi|238797731|ref|ZP_04641225.1| hypothetical protein ymoll0001_12390 [Yersinia mollaretii ATCC
43969]
gi|238718372|gb|EEQ10194.1| hypothetical protein ymoll0001_12390 [Yersinia mollaretii ATCC
43969]
Length = 382
Score = 39.1 bits (89), Expect = 0.59, Method: Composition-based stats.
Identities = 16/110 (14%), Positives = 36/110 (32%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPV 61
+L + +S++LH++ + LL + Q V + D + + +
Sbjct: 10 KLNRAIIVSVVLHIVLIALLIWGSLTQTTEMGGGGAGGEVIDAVMVDPGAVTEQYNRQQQ 69
Query: 62 VQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALK 111
Q E + + Q+ + Q E ++ E A +
Sbjct: 70 QQTDAKRAEQQRQKKAEQQAEELQQKQATEQQRLKELEKERLQAQEDAKQ 119
>gi|108808321|ref|YP_652237.1| hypothetical protein YPA_2327 [Yersinia pestis Antiqua]
gi|145599503|ref|YP_001163579.1| hypothetical protein YPDSF_2231 [Yersinia pestis Pestoides F]
gi|167468088|ref|ZP_02332792.1| hypothetical protein YpesF_09354 [Yersinia pestis FV-1]
gi|229838468|ref|ZP_04458627.1| extracellular functions; secreted protein [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|294504552|ref|YP_003568614.1| hypothetical protein YPZ3_2442 [Yersinia pestis Z176003]
gi|108780234|gb|ABG14292.1| hypothetical protein YPA_2327 [Yersinia pestis Antiqua]
gi|145211199|gb|ABP40606.1| hypothetical protein YPDSF_2231 [Yersinia pestis Pestoides F]
gi|229694834|gb|EEO84881.1| extracellular functions; secreted protein [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|262362453|gb|ACY59174.1| hypothetical protein YPD4_2267 [Yersinia pestis D106004]
gi|262366540|gb|ACY63097.1| hypothetical protein YPD8_2422 [Yersinia pestis D182038]
gi|294355011|gb|ADE65352.1| hypothetical protein YPZ3_2442 [Yersinia pestis Z176003]
Length = 1052
Score = 39.1 bits (89), Expect = 0.59, Method: Composition-based stats.
Identities = 27/243 (11%), Positives = 75/243 (30%), Gaps = 14/243 (5%)
Query: 4 ENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIY----NEDYHSSKYKKIEE 59
L +S+++ + + P + + V + + K
Sbjct: 9 TRLLPLSILI-SALIPAAVLAAPSVAIPPPVQDLINQVQSYANAHVISPEQAETLIKRLT 67
Query: 60 PVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMP 119
+ + + ++ + E + ++ + + + + + +Q K +A
Sbjct: 68 VTPEKLKEEEARVKQELAAVEKKQKEANTEIITTSIEKDQFNKALNNKQKAKLAAETVFI 127
Query: 120 VSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAI 179
+ + + KA NK L + + K S+ + L K++ + I Q+ +
Sbjct: 128 NANSKQNEAIKAVNKNWSLADENISTKLSVIVNGESKTQAILAEKIKLTETANINQQEQV 187
Query: 180 AIVRN---RVIANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRML 235
+ + N + D K + + +L Q + ++ + L
Sbjct: 188 IKAQQLDTEIQKNQSELDDAINNKTTGTIVLQEKLTQ-----AETKLETAKNNPKSKLSL 242
Query: 236 REN 238
E
Sbjct: 243 AEA 245
>gi|307308883|ref|ZP_07588571.1| protein of unknown function DUF930 [Sinorhizobium meliloti BL225C]
gi|306900688|gb|EFN31300.1| protein of unknown function DUF930 [Sinorhizobium meliloti BL225C]
Length = 306
Score = 39.1 bits (89), Expect = 0.59, Method: Composition-based stats.
Identities = 12/149 (8%), Positives = 37/149 (24%)
Query: 33 ISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTH 92
++ + +SV+ + +K + E + E +
Sbjct: 33 PAKEQSVSVELVPQPKSAEKPEQKPNAAKSEQARPQPEAFESAAAPAEKEKPPQPELPPA 92
Query: 93 ATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTV 152
A + S + + + P + + + A+ +
Sbjct: 93 APKKTETPSETPEASRPAPAKTENTASEKPAESRTALAELRVDARSAANEAADAAAAPPA 152
Query: 153 VVRPDKKELLSKVEKSSRKRIPSQDAIAI 181
P +K +L + + ++
Sbjct: 153 AAVPQEKPVLEEARAEPTQPPEAKAEREA 181
>gi|269960028|ref|ZP_06174405.1| hypothetical protein VME_07890 [Vibrio harveyi 1DA3]
gi|269835327|gb|EEZ89409.1| hypothetical protein VME_07890 [Vibrio harveyi 1DA3]
Length = 741
Score = 39.1 bits (89), Expect = 0.59, Method: Composition-based stats.
Identities = 16/153 (10%), Positives = 40/153 (26%), Gaps = 6/153 (3%)
Query: 28 QLLVPISRREML--SVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGD-- 83
PI E V + K + +PV + ++ D + + D
Sbjct: 46 PTPDPIQPPESEKPPVPPVDTPPVLPPKAEPKPDPVPEKHPDQNQDKQPDQNQNKQTDEN 105
Query: 84 -RFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGIS 142
+ +E + + + + + P DK ++ + T ++ D
Sbjct: 106 AKQQPDQNQDKQPDEVTKPQPDQNQNKQTDEDTKQQPEQNQDK-QLDENTKQQPDQNQDK 164
Query: 143 FAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPS 175
E + + + +
Sbjct: 165 QPEPPVVAPDPTPVPVPPRAFTLTAPTSVSGKT 197
>gi|268680681|ref|YP_003305112.1| TonB family protein [Sulfurospirillum deleyianum DSM 6946]
gi|268618712|gb|ACZ13077.1| TonB family protein [Sulfurospirillum deleyianum DSM 6946]
Length = 201
Score = 39.1 bits (89), Expect = 0.59, Method: Composition-based stats.
Identities = 28/186 (15%), Positives = 60/186 (32%), Gaps = 4/186 (2%)
Query: 69 QENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKI 128
+ +R+ + E + + E + K K + + +
Sbjct: 3 PKPPIRELIITEVSFLEELKPEMIHQEILQELPRKIKPIVEQKLEKKVPKVSAKTFPIQK 62
Query: 129 SKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIA 188
+ + K+ + + V P +E + S RK +A VR+++
Sbjct: 63 PIQELVVEKTIHSNVPIKEQAEVLPVTPKAQEAPMRTTLSKRKDDLLLVYLAKVRDKIQE 122
Query: 189 NWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQ 247
+ PS K+ + + F ++ G V + +L NA AV+++
Sbjct: 123 SLRYPSAAKKMGIEGETVVQFLIHTNGMVDATSIKIAKSSGK---VLLDRNAIDAVLEAV 179
Query: 248 AFRLSP 253
F P
Sbjct: 180 PFEFPP 185
>gi|194751660|ref|XP_001958143.1| GF10772 [Drosophila ananassae]
gi|190625425|gb|EDV40949.1| GF10772 [Drosophila ananassae]
Length = 647
Score = 39.1 bits (89), Expect = 0.59, Method: Composition-based stats.
Identities = 16/170 (9%), Positives = 45/170 (26%), Gaps = 6/170 (3%)
Query: 26 NVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRF 85
N L + ++ + + + + + Q + +E + + QE +
Sbjct: 248 NGHLEDEVHELVVVEAEAKSQTEVANIE--ENAPVRTQEEKPIKETNSVEEAPQEITESI 305
Query: 86 SDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAE 145
D+ T + T+ +S + + ++
Sbjct: 306 QDRIPTDEEKTPTEDVASPTDTVETVIPEDTTKDIELSPDSGV----DETDKSASNLTVN 361
Query: 146 KKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSD 195
+ + D E + K S + D R+ ++ +
Sbjct: 362 VELAHIEQAKQDAAEAVEKRGGHSHGIDTTDDEDDCRPQRIRRCSSLKTG 411
>gi|315049111|ref|XP_003173930.1| MATH and UCH domain-containing protein [Arthroderma gypseum CBS
118893]
gi|311341897|gb|EFR01100.1| MATH and UCH domain-containing protein [Arthroderma gypseum CBS
118893]
Length = 1471
Score = 39.1 bits (89), Expect = 0.60, Method: Composition-based stats.
Identities = 25/224 (11%), Positives = 59/224 (26%), Gaps = 8/224 (3%)
Query: 22 YFNFNVQLLVPISRREM--LSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQ 79
YF+ + P E D + ++ +P + + SQ+ V
Sbjct: 954 YFSIPEFVPPPPVPNEANETKDDVPAPPPPPPVQNEEQPQPTQEAQPPSQDEDVEMNDAS 1013
Query: 80 ENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQ 139
E ++ S+ + S + + +
Sbjct: 1014 PEEIPIQPPQNQDGQEQQSDNLPSAPEPPEHEMSDNAPDQPETNGVEPTPAPEGQTDEQA 1073
Query: 140 GISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRF 199
I + D+ + + E + A+V V N + +
Sbjct: 1074 ANEAIIASIIAQDLALLDESQEMDTSEGYTDANAIPPPPPAVV-EEVSTN---SAGNEAE 1129
Query: 200 KKLRVKMHFQLNQKGFVLGKINVDVVG--GTELVRRMLRENARK 241
+ + H ++ + G V+ E + +E A++
Sbjct: 1130 EGREAQEHHSGSEDSQMEGSPIVESRNNVPEETNAQTSQEEAQR 1173
>gi|210613643|ref|ZP_03289802.1| hypothetical protein CLONEX_02009 [Clostridium nexile DSM 1787]
gi|210151073|gb|EEA82081.1| hypothetical protein CLONEX_02009 [Clostridium nexile DSM 1787]
Length = 795
Score = 39.1 bits (89), Expect = 0.61, Method: Composition-based stats.
Identities = 15/165 (9%), Positives = 47/165 (28%), Gaps = 8/165 (4%)
Query: 21 LYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQE 80
+YFNF P V+ + E+ ++ + + + E + +
Sbjct: 533 IYFNFIGNYYPP--------VETVSEEERIAAIEAEQLRKKQEKAKRAAEVQKQKKAALM 584
Query: 81 NGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQG 140
D E + + K + + + + +E+ L+
Sbjct: 585 KAVEAGDPEAIAEYERKLALQRERNHRRQQKIKEAREADPAYIAQMEEKERLQREKLLEA 644
Query: 141 ISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNR 185
+++ + + + +K + + + + V +
Sbjct: 645 ERKRTERANRQKKLSRKELKEAAKTDPKAAEEWQALKEKEAVARQ 689
>gi|45184645|ref|NP_982363.1| AAL179Wp [Ashbya gossypii ATCC 10895]
gi|44979991|gb|AAS50187.1| AAL179Wp [Ashbya gossypii ATCC 10895]
Length = 360
Score = 39.1 bits (89), Expect = 0.61, Method: Composition-based stats.
Identities = 15/160 (9%), Positives = 38/160 (23%), Gaps = 4/160 (2%)
Query: 21 LYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVR--DFSV 78
++ + E S + + SS ++ + + + +
Sbjct: 69 TATSWTSDSVSTEPSAEPTSTEPTNLPEVTSSPATPVQPTSAPEETFEEPTESTSAEPTS 128
Query: 79 QENGDR--FSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQ 136
+ + E S +SA P + K+ +
Sbjct: 129 SPEPVKSAEPTSSPEPVKSVEPTSSPEPVKSVEPVKSAEPVKSPEPVKSPEPVKSPEPVK 188
Query: 137 DLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQ 176
+ + AE S P + +S + +
Sbjct: 189 SPEPVKSAEPTSSPEPTGSPQRSRPAGGQNGASFEEEILR 228
>gi|257481745|ref|ZP_05635786.1| ferric siderophore transporter, periplasmic energy transduction
protein TonB [Pseudomonas syringae pv. tabaci ATCC
11528]
gi|331009378|gb|EGH89434.1| ferric siderophore transporter, periplasmic energy transduction
protein TonB [Pseudomonas syringae pv. tabaci ATCC
11528]
Length = 250
Score = 39.1 bits (89), Expect = 0.62, Method: Composition-based stats.
Identities = 16/152 (10%), Positives = 39/152 (25%), Gaps = 6/152 (3%)
Query: 104 SKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLS 163
+ + + P Q E + + + +P+K
Sbjct: 83 QAPKPEIVVPKKVEKPKPKPKPQPPKPQKKPEPPQEKPADEKPVDTPPTTAKPEKAAAPK 142
Query: 164 KVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKINV 222
+ + + + P D +R + ++ F ++ G VL
Sbjct: 143 PAPAPAPPSNALPSWQGDLLSHLGKYKKYPEDARRRGMQGVARLRFVVDADGNVLSYSIA 202
Query: 223 DVVGGTELVRRMLRENARKAVIKSQAFRLSPS 254
+ G L + + ++Q P
Sbjct: 203 NSSGS-----PALDRATMEMIRRAQPLPKPPK 229
>gi|222097937|ref|YP_002531994.1| hypothetical protein BCQ_4278 [Bacillus cereus Q1]
gi|221241995|gb|ACM14705.1| conserved hypothetical protein [Bacillus cereus Q1]
Length = 283
Score = 39.1 bits (89), Expect = 0.62, Method: Composition-based stats.
Identities = 16/138 (11%), Positives = 31/138 (22%), Gaps = 4/138 (2%)
Query: 83 DRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGIS 142
+D E+ + K + P Q++ ++T + ++
Sbjct: 24 KEKADYEPYKKHESVETAQGEEETSNPPKVEGIEDEPTKDEKPQQVEESTKGDSEINDRR 83
Query: 143 FAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKL 202
K + + L IA V + +
Sbjct: 84 PYYKDANNNAPTV----SLEQYDGIEVGMSANKVKEIAGVPRFIEKYKSFSIYGYLGHGG 139
Query: 203 RVKMHFQLNQKGFVLGKI 220
M N G V K
Sbjct: 140 EGTMTITFNPDGSVTKKE 157
>gi|293390509|ref|ZP_06634843.1| cell envelope integrity inner membrane protein TolA
[Aggregatibacter actinomycetemcomitans D7S-1]
gi|290951043|gb|EFE01162.1| cell envelope integrity inner membrane protein TolA
[Aggregatibacter actinomycetemcomitans D7S-1]
Length = 382
Score = 39.1 bits (89), Expect = 0.62, Method: Composition-based stats.
Identities = 17/126 (13%), Positives = 36/126 (28%), Gaps = 12/126 (9%)
Query: 147 KSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKM 206
+ + + + I+ V + RF +
Sbjct: 265 SASQGSNINKQGSQGSGASAGAGDGGKAGSRYAGIIYKSVKPYFR---GDSRFFGKVCDI 321
Query: 207 HFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSP--STYKSWRNITL 264
+L+ G +L V G + L A A+ +++ P Y+ ++ +
Sbjct: 322 RIELSSDGTILSYQKV--SGPND-----LCGAALNAIGQTRKMNEPPTPEEYEIFKRSIV 374
Query: 265 FFVPSK 270
F P K
Sbjct: 375 TFDPRK 380
>gi|121612657|ref|YP_999835.1| TonB domain-containing protein [Campylobacter jejuni subsp. jejuni
81-176]
gi|167004806|ref|ZP_02270564.1| TonB domain protein [Campylobacter jejuni subsp. jejuni 81-176]
gi|121504190|gb|EAQ71987.2| TonB domain protein [Campylobacter jejuni subsp. jejuni 81-176]
Length = 259
Score = 39.1 bits (89), Expect = 0.62, Method: Composition-based stats.
Identities = 21/223 (9%), Positives = 69/223 (30%), Gaps = 16/223 (7%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
+++ +++ ++L++F + + +I + + ++ + Q
Sbjct: 11 SFLLALAIYISIVILVFF------RLVSEVEPAIQYTDIKDSFVDIELAEPSKQVITQSN 64
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
+ + E + + + K S+ ++ +KE +
Sbjct: 65 TPKEIQKPTEQVDIEKLFAQTTNKTVKTEDIDQKASNFNELFGNIKEIQEEKTTKIQSSA 124
Query: 126 QKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNR 185
+ + + K Q + + + + ++K + + V
Sbjct: 125 KSGASSAPKPQASELVKQLNDSLLQE-------ESSTQGQSTKAQKIGIYDEFLGKVVRI 177
Query: 186 VIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGT 228
+ W +K+ VK+ +++ G G +V+ G
Sbjct: 178 ITQRWTQYY--PNSEKISVKVKIFIDENGKF-GYTSVEKSGNP 217
>gi|51597165|ref|YP_071356.1| pertactin family virulence factor/autotransporter [Yersinia
pseudotuberculosis IP 32953]
gi|51590447|emb|CAH22087.1| putative pertactin family virulence factor/autotransporter
[Yersinia pseudotuberculosis IP 32953]
Length = 1121
Score = 39.1 bits (89), Expect = 0.62, Method: Composition-based stats.
Identities = 19/195 (9%), Positives = 61/195 (31%), Gaps = 11/195 (5%)
Query: 4 ENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIY----NEDYHSSKYKKIEE 59
L +S+++ + + P + + V + + K
Sbjct: 9 TRLLPLSILI-SSLIPGAVLAAPSVAIPPPVQDLINQVQSYANAHVISPEQAETLIKRLT 67
Query: 60 PVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMP 119
+ + + ++ + E + ++ + + + + + Q K +A
Sbjct: 68 VTPEKLKEEEARVKQELAAVEKKQKEANTEIITTSLEKDQFNKALNNTQKAKLAAETVFI 127
Query: 120 VSPYDKQKISKATNK------EQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRI 173
+ + + KA NK E + +S T + +K +L + + +++I
Sbjct: 128 NANSKQNEAIKAVNKNWSLADENISKKLSVIVNGESKTQAILAEKIKLTETADINQQEQI 187
Query: 174 PSQDAIAIVRNRVIA 188
+ ++ +
Sbjct: 188 IKAQQLDAEIQQIKS 202
>gi|227820944|ref|YP_002824914.1| hypothetical protein NGR_c03640 [Sinorhizobium fredii NGR234]
gi|227339943|gb|ACP24161.1| conserved hypothetical protein [Sinorhizobium fredii NGR234]
Length = 130
Score = 39.1 bits (89), Expect = 0.63, Method: Composition-based stats.
Identities = 13/74 (17%), Positives = 22/74 (29%), Gaps = 5/74 (6%)
Query: 179 IAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVG--GTELVRRMLR 236
+ V + W P+ K V + F G ++G + G R
Sbjct: 38 VDEVSEALGKCWTPPAGIKGS---FVTLKFGFRGNGTLMGPPQPTAIRVTGDADQREAFV 94
Query: 237 ENARKAVIKSQAFR 250
A +A+ K
Sbjct: 95 AAATEALEKCMPLE 108
>gi|115744087|ref|XP_790495.2| PREDICTED: similar to Microtubule Associated Protein 215 kDa
(XMAP215) [Strongylocentrotus purpuratus]
gi|115938951|ref|XP_001188266.1| PREDICTED: similar to Microtubule Associated Protein 215 kDa
(XMAP215) [Strongylocentrotus purpuratus]
Length = 1787
Score = 39.1 bits (89), Expect = 0.63, Method: Composition-based stats.
Identities = 13/143 (9%), Positives = 39/143 (27%)
Query: 47 EDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKG 106
+ + KK + + ++ + + + + T + + SSS+
Sbjct: 1044 PEKATKASKKETSRPSTAAPTEEPESKKESAPTKRPKTAPAKPVQNDTGSTSSLSSSASA 1103
Query: 107 EQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVE 166
+ S+ + K K K ++ I K+
Sbjct: 1104 PPSEGASSKGKAGKGASAKGKAGKPAPSKKKKDEDEETGPALIQNNGKDRRLKDESDLKV 1163
Query: 167 KSSRKRIPSQDAIAIVRNRVIAN 189
P + + +++++
Sbjct: 1164 LKWNFTTPRAEYVDQLKDQIQPC 1186
>gi|262165949|ref|ZP_06033686.1| TolA protein [Vibrio mimicus VM223]
gi|262025665|gb|EEY44333.1| TolA protein [Vibrio mimicus VM223]
Length = 320
Score = 39.1 bits (89), Expect = 0.64, Method: Composition-based stats.
Identities = 29/226 (12%), Positives = 76/226 (33%), Gaps = 10/226 (4%)
Query: 47 EDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKG 106
E ++K + + + +++ V + ++ + + A E K +
Sbjct: 102 EKERAAKAEAERKVKEEAAKKAEQERVAKEAAAAKAEQQRIEREKEAKLAEEKAKREKEI 161
Query: 107 EQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVE 166
++ L + + +K K K + A++ +++ + ++ +
Sbjct: 162 AAKAEQDRLAKEKAAKEAAEKAKKEKEKAAKAEADRKAQEAALNDIFGSLSEESQQNNSA 221
Query: 167 KSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVG 226
+ AI + N + F+ + +++ +L G ++ V+
Sbjct: 222 RQQFVTSEVGRYGAIYTQLIRQNLLVEDSFRGKQ---CRVNLKLIPTGTGALLGSLTVLD 278
Query: 227 GTELVRRMLRENARKAVIKSQAFRLS---PSTYKSWRNITLFFVPS 269
G L ++AV + +F L P + +NI L P
Sbjct: 279 GDSR----LCAATKRAVAQVNSFPLPKDQPDVVEKLKNINLTVAPE 320
>gi|77553530|gb|ABA96326.1| transposon protein, putative, CACTA, En/Spm sub-class [Oryza sativa
Japonica Group]
Length = 892
Score = 39.1 bits (89), Expect = 0.65, Method: Composition-based stats.
Identities = 12/135 (8%), Positives = 30/135 (22%), Gaps = 6/135 (4%)
Query: 29 LLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQ 88
P++ + S + + K ++E + +
Sbjct: 470 PEPPVASPP------VPEPPVASPPVPEPPVASPRTKKDAEEPSESVQAEPTKLAAGEIE 523
Query: 89 TKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKS 148
+ S + Q + + + K K + K + +K
Sbjct: 524 AVPDQPMPDQPEQSQPEPSQPEEPKGADVLVMVRTHKHKAKSESKKHYMVTAFRGRDKDI 583
Query: 149 IDTVVVRPDKKELLS 163
I+ K
Sbjct: 584 INAEFDNRKLKGFKQ 598
>gi|254490977|ref|ZP_05104159.1| TonB family C-terminal domain [Methylophaga thiooxidans DMS010]
gi|224463886|gb|EEF80153.1| TonB family C-terminal domain [Methylophaga thiooxydans DMS010]
Length = 90
Score = 39.1 bits (89), Expect = 0.65, Method: Composition-based stats.
Identities = 12/74 (16%), Positives = 29/74 (39%), Gaps = 6/74 (8%)
Query: 192 IPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRL 251
+ +R ++ VK+ F +++ G VL G + L + + + K+
Sbjct: 13 PSASRRRGEEGIVKLFFVVDRTGAVLDYKITQSSGSSR-----LDDAVIRMLKKASPLPA 67
Query: 252 SPSTYKSWRNITLF 265
PS + + + +
Sbjct: 68 FPSGMQQ-QQLEVN 80
>gi|298207910|ref|YP_003716089.1| hypothetical protein CA2559_06650 [Croceibacter atlanticus
HTCC2559]
gi|83850551|gb|EAP88419.1| hypothetical protein CA2559_06650 [Croceibacter atlanticus
HTCC2559]
Length = 288
Score = 39.1 bits (89), Expect = 0.66, Method: Composition-based stats.
Identities = 34/256 (13%), Positives = 74/256 (28%), Gaps = 16/256 (6%)
Query: 4 ENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSV---DNIYNEDYHSSKYKKIEEP 60
+ LAI++I+HV +LLL F L P ++ + + K +
Sbjct: 10 KKSLAITVIIHVALILLLLFFGFTYLDPPPENGIAVNFGTSSVGQGDVQPTEPVKSAPKN 69
Query: 61 VVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPV 120
Q + + + SD TE++ + K + K+ + PV
Sbjct: 70 TSQPTPPEPQQKTPEIKEEVVTQDNSDAPVIDKTEDKKEVKKVEKPVEKPKKQTPVEKPV 129
Query: 121 SPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIA 180
+ K + +S + +K P+ +
Sbjct: 130 EKVEPVKKPDPKPDKSTTDALSSILNGPKKDGTQNGGEGNDNQAGDKGDPNGDPNAKSYY 189
Query: 181 IVRNRVIANWNIPSDFKRF-----------KKLRVKMHFQLNQKGFVLGKINVDVVGGTE 229
+ + N ++ + V + ++++ G V+
Sbjct: 190 GNGKGLDGDGNYRLGGRKALNKKKFVQDCNESGIVVVKIEVDRNGNVIKATPGVKGTTNS 249
Query: 230 LVRRMLRENARKAVIK 245
L E A++A +
Sbjct: 250 ASC--LTEPAKRAALA 263
>gi|294677899|ref|YP_003578514.1| protein TonB [Rhodobacter capsulatus SB 1003]
gi|294476719|gb|ADE86107.1| protein TonB [Rhodobacter capsulatus SB 1003]
Length = 272
Score = 39.1 bits (89), Expect = 0.67, Method: Composition-based stats.
Identities = 25/221 (11%), Positives = 62/221 (28%), Gaps = 7/221 (3%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
GLA+S+ LH + + +L + +++ + ++ + + + +
Sbjct: 19 GLALSLALHAVAVSVLS---QTEAAPAALVAAGAGGEDLDGLEAIAATFVDLAPQIQLPE 75
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
L R D + ++ + P +K
Sbjct: 76 PEMALPLTAPVIDIPQV-RLPDPVLLPPEPPKITPPKRAEEKPKPPPPKPKPEPRPRAEK 134
Query: 126 QKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNR 185
K +K + + + S A + + A +R R
Sbjct: 135 PKQAKPAPVQSESRAASRAAGSGAGAQAGTGGTD--AQATVSAGTTKSLLAKWGATIRTR 192
Query: 186 VIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVG 226
+ + P+ R V + ++++ G +L G
Sbjct: 193 IERRKSYPAAAGRAAG-SVGLALKVSRDGALLSAAVNRSSG 232
>gi|195028744|ref|XP_001987236.1| GH20079 [Drosophila grimshawi]
gi|193903236|gb|EDW02103.1| GH20079 [Drosophila grimshawi]
Length = 1115
Score = 39.1 bits (89), Expect = 0.67, Method: Composition-based stats.
Identities = 20/215 (9%), Positives = 56/215 (26%), Gaps = 7/215 (3%)
Query: 34 SRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHA 93
++ ++ + + N++ S ++ K Q + +Q + +++
Sbjct: 906 PKQTIVDQEQLSNDENESVIEEQKPVEEDADKDLPQNKTESEEKLQAETEEGAEKNVQKI 965
Query: 94 TENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVV 153
++ + K+ + + + I ++ + +K
Sbjct: 966 GVENKEQQPVDETFDEHKDEQPIDAEMKEQQPKPIETEAREQPEQDEKEDIPEKDQQPQE 1025
Query: 154 VRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQK 213
+ + ++ Q + + + QLN
Sbjct: 1026 TKEYAAGIDQQLLDERVSATKDQP-------LIETDSKPDQAAGSEQPQTDNFTTQLNPT 1078
Query: 214 GFVLGKINVDVVGGTELVRRMLRENARKAVIKSQA 248
+VD V E + A V SQ
Sbjct: 1079 ETTGVVRSVDGVSTVEGCINSVSSEAEANVDASQP 1113
>gi|309366252|emb|CAR98351.1| hypothetical protein CBG_25815 [Caenorhabditis briggsae AF16]
Length = 894
Score = 39.1 bits (89), Expect = 0.67, Method: Composition-based stats.
Identities = 11/122 (9%), Positives = 27/122 (22%), Gaps = 2/122 (1%)
Query: 42 DNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRS 101
+ + D ++ K + +T
Sbjct: 770 EAKPVSKETDPLNSPRALKKELPPIKELKVQKTDETLPTPPATAKATIKKQPSRTKTTVE 829
Query: 102 SSSKGEQALKESALLRMPVSPYDKQ--KISKATNKEQDLQGISFAEKKSIDTVVVRPDKK 159
S + K+ + P KI+ T + + + S + V +
Sbjct: 830 PSKTTKTITKDESAADKKTPPPQAPLTKIAPPTKQPSKKKDTLADDVDSTEKVKKTKSES 889
Query: 160 EL 161
+
Sbjct: 890 KN 891
>gi|301770085|ref|XP_002920464.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8-like [Ailuropoda
melanoleuca]
gi|281341524|gb|EFB17108.1| hypothetical protein PANDA_009195 [Ailuropoda melanoleuca]
Length = 1116
Score = 39.1 bits (89), Expect = 0.67, Method: Composition-based stats.
Identities = 18/160 (11%), Positives = 42/160 (26%)
Query: 26 NVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRF 85
+ P S S++ I ++D +S +
Sbjct: 347 PTAQMPPPSVEVNESIELINDQDERMVPQNISAPVEPIAASNSDVLPIIQPVPITKNVPQ 406
Query: 86 SDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAE 145
D+TK + R S + + ++ K T D +
Sbjct: 407 IDRTKKPVKLPDDHRIKSENKDHEQQSLQDGKVVPDRSTKPVFPPPTAMLTDEEKARIHA 466
Query: 146 KKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNR 185
+ ++ R +K+ + E+ K + + +
Sbjct: 467 ETALLMEKNRQEKELRERQQEEQKEKLRREEQEQKARKKQ 506
>gi|261838659|gb|ACX98425.1| siderophore-mediated iron transport protein [Helicobacter pylori
51]
Length = 283
Score = 39.1 bits (89), Expect = 0.67, Method: Composition-based stats.
Identities = 30/257 (11%), Positives = 73/257 (28%), Gaps = 15/257 (5%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
IS L+ + YF + + P+++ V +S K E +
Sbjct: 18 SFLISFALYA--IGFGYFLLHEEAPTPLAQAGTTKVTMSLASINTNSNTKTNAESAKPKE 75
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
++ + +E S + + K + + + ++ ++
Sbjct: 76 EPKEKPKKEEPKKEEPKKEVSKPKPKPKPKPKPKPKPKPEPKPKPEPKPEPKVEEVKKEE 135
Query: 126 QKISKATNKEQDLQGISFAEKK-------SIDTVVVRPDKKELLSKVEKSSRKRIPSQDA 178
K + ++ A K+ +K + E + S +
Sbjct: 136 PKEEPKKEEAKEEAKEKSAPKQVTTKDIVKEKDKQEESNKTSEGATSEAQAYNPGVSNEF 195
Query: 179 IAIVRNRVIANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRE 237
+ ++ + + P + + V + F +N G V V +L
Sbjct: 196 LMKIQTAISSKNRYPKMAQIRGIEGEVLVSFVINPDGSVTDIKVVKSNTTD-----ILNH 250
Query: 238 NARKAVIKSQAFRLSPS 254
A +A+ + P
Sbjct: 251 AALEAIKNAAYLFPKPE 267
>gi|300772911|ref|ZP_07082780.1| translation initiation factor IF-2 [Sphingobacterium spiritivorum
ATCC 33861]
gi|300759082|gb|EFK55909.1| translation initiation factor IF-2 [Sphingobacterium spiritivorum
ATCC 33861]
Length = 1024
Score = 39.1 bits (89), Expect = 0.67, Method: Composition-based stats.
Identities = 16/143 (11%), Positives = 35/143 (24%), Gaps = 2/143 (1%)
Query: 41 VDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENG--DRFSDQTKTHATENET 98
+D K +K E + E V + E + ET
Sbjct: 140 IDLDSIGKGKPKKEEKSEVAPKIEEPVKVEVKVETPKIVEKPVEPVQPVVAEKTEAPKET 199
Query: 99 KRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDK 158
+ K + K P K++ K + + +++
Sbjct: 200 VVPQAQKPAEPAKPKVEEVKPEVQAVKKEEVKPAEPAKPATPQDDVIRARAESLSGPKVI 259
Query: 159 KELLSKVEKSSRKRIPSQDAIAI 181
++ + S + P +
Sbjct: 260 GKIELPTARPSHRDRPVASSSNA 282
>gi|91218297|ref|ZP_01255243.1| hypothetical protein P700755_06441 [Psychroflexus torquis ATCC
700755]
gi|91183572|gb|EAS69969.1| hypothetical protein P700755_06441 [Psychroflexus torquis ATCC
700755]
Length = 268
Score = 39.1 bits (89), Expect = 0.67, Method: Composition-based stats.
Identities = 20/229 (8%), Positives = 57/229 (24%), Gaps = 6/229 (2%)
Query: 21 LYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSV-Q 79
+ NF + + + + E + + +
Sbjct: 17 IAVNFGTTDFGSGEVQPTEPIKTSPQKTATPPPQEVEELSTTEDIKEEVVTQETEEAPVI 76
Query: 80 ENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQ 139
E ++ +T+ + + K + Q PV +K +
Sbjct: 77 EKSEKVVKETEEQPEKPKEKVQQKVEKTQPEPTPEPEPEPVPEQKPEKSVTDAMESLMNG 136
Query: 140 GISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSD---F 196
+ + + + + K ++ + R+ +
Sbjct: 137 PKNDGKAEGGEGDDNQTGDKGDPDGDPNANNYYGTGKGLDGDGYYRLGGRKALSKQKFVQ 196
Query: 197 KRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIK 245
K + V + ++N+ G V+ L + A++A +
Sbjct: 197 KCDESGEVVVRIEVNRNGDVVKATAGVKGTTNSTSC--LLDPAKRAALA 243
>gi|154148771|ref|YP_001406440.1| TonB family protein [Campylobacter hominis ATCC BAA-381]
gi|153804780|gb|ABS51787.1| putative TonB family C- domain protein [Campylobacter hominis ATCC
BAA-381]
Length = 248
Score = 39.1 bits (89), Expect = 0.68, Method: Composition-based stats.
Identities = 38/264 (14%), Positives = 71/264 (26%), Gaps = 27/264 (10%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
G IS+ LH + + N DNI D +
Sbjct: 8 GFIISLSLHFGVVYAAVYKIN---------------DNINISDEIYTLPISAFSKAPNIA 52
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
S+ E L + + E K+ + + + +E ++ P + +
Sbjct: 53 QSANEALSENNEISEEEISTKKIEKSEYIAKKELTETKTTTAIKRQEKDTVKKPETVKN- 111
Query: 126 QKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNR 185
I K Q + + +K + S P ++
Sbjct: 112 --IKSKPKKTQKKENFTGNKKADDKQNNNSNNNINSNFISNDISVSNTPDNALFKEIKKA 169
Query: 186 VIANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVI 244
+ N P K+ +VK+ F ++ + +L +NA V
Sbjct: 170 IQTNLIYPEIAKQNGYNGKVKLDFDIDSTRIPKNIKIIKSSS-----YSILDKNAIYTVK 224
Query: 245 KSQA-FRLSPSTYKSWRNITLFFV 267
K+ F Y I + F
Sbjct: 225 KAAKDFPEIDKKYNI--TININFN 246
>gi|116253141|ref|YP_768979.1| proline rich protein [Rhizobium leguminosarum bv. viciae 3841]
gi|115257789|emb|CAK08887.1| putative proline rich protein [Rhizobium leguminosarum bv. viciae
3841]
Length = 352
Score = 39.1 bits (89), Expect = 0.68, Method: Composition-based stats.
Identities = 19/158 (12%), Positives = 39/158 (24%), Gaps = 5/158 (3%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
+ G+ +S+ H+ + LL F P E + V+ + + + K E+P
Sbjct: 22 IRWGVVVSVAAHIPIIALLIFGLPKIEPKP-PEDESVKVELVPPPEEKKPEPKPEEKPPE 80
Query: 63 QFKGSSQENLVRDFSVQENGD----RFSDQTKTHATENETKRSSSSKGEQALKESALLRM 118
+ + +Q K + ++S
Sbjct: 81 PKPPEEAKKEPPPPPPPPPPPPPASKTPEQAKPRPMPTLSPVIEFGDRNSGPEKSLAGNS 140
Query: 119 PVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRP 156
P + E A +K
Sbjct: 141 PQGETKPATTPPQHDAEPAQMPTKTAAEKPKIEEPPSK 178
>gi|254000045|ref|YP_003052108.1| TonB family protein [Methylovorus sp. SIP3-4]
gi|253986724|gb|ACT51581.1| TonB family protein [Methylovorus sp. SIP3-4]
Length = 257
Score = 39.1 bits (89), Expect = 0.68, Method: Composition-based stats.
Identities = 15/154 (9%), Positives = 38/154 (24%), Gaps = 4/154 (2%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPV 61
RL+ L IS+ +H + + ++L ++ + P
Sbjct: 14 RLQWALIISIAVHAILIW----QLPNLKFDSPPEPQVLQIELATPVKKQEETPAEAPAPA 69
Query: 62 VQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVS 121
+ + + S + E + S E+ +
Sbjct: 70 PEPPKPEPVVKPEVKPQPKPVIKPSPEVAPPPVERKPDPSPPVMTTTPQPEAPKAETAPA 129
Query: 122 PYDKQKISKATNKEQDLQGISFAEKKSIDTVVVR 155
P A + ++ ++ +D
Sbjct: 130 PAPVAAAQPAPAAPAEPPKVAATSQQDLDAAKNE 163
>gi|171463035|ref|YP_001797148.1| TonB family protein [Polynucleobacter necessarius subsp.
necessarius STIR1]
gi|171192573|gb|ACB43534.1| TonB family protein [Polynucleobacter necessarius subsp.
necessarius STIR1]
Length = 256
Score = 39.1 bits (89), Expect = 0.68, Method: Composition-based stats.
Identities = 32/242 (13%), Positives = 68/242 (28%), Gaps = 29/242 (11%)
Query: 4 ENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQ 63
L +S+++H++FL F + + LSV + + +
Sbjct: 33 RFALCVSILIHILFLS---FRWGAGEIQNRRLNTPLSVVLVNASNKTPPQKANKLAQADL 89
Query: 64 FKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPY 123
G EN + + + + + ++ + +SP
Sbjct: 90 QGGGKTENQDATVVHRARLGAEARLEVLEKQQKQMLAKLDERRNRSGGRKSGDEQKISP- 148
Query: 124 DKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVR 183
L + K + + P +K L K+ R DA+ +R
Sbjct: 149 -------------QLNSLEAELAKRLQSDGREPRRKVLTGANTKAVRFAHYY-DAMHAMR 194
Query: 184 NRVIANWN----IPSDFKRFKKLRVKM------HFQLNQKGFVLGKINVDVVGGTELVRR 233
++ A + + + L + + N +G G G + R
Sbjct: 195 QKIEAYGSAFFPRANGRPLYGSLVIVVSVDNQERITTNAQGK-DGLSIDRSSGNRSWIAR 253
Query: 234 ML 235
L
Sbjct: 254 PL 255
>gi|194753952|ref|XP_001959269.1| GF12790 [Drosophila ananassae]
gi|190620567|gb|EDV36091.1| GF12790 [Drosophila ananassae]
Length = 3908
Score = 39.1 bits (89), Expect = 0.69, Method: Composition-based stats.
Identities = 16/157 (10%), Positives = 44/157 (28%), Gaps = 2/157 (1%)
Query: 27 VQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFS 86
++ P + + V+ +D ++P V QE L D + +
Sbjct: 170 AEVPQPEPKVLEVKVEL--GKDQVDKAEVPQDQPKVVEIKVEQEVLKEDAKSVDATIQEV 227
Query: 87 DQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEK 146
+++ NE + K ++ + + + +
Sbjct: 228 IESEKSEKLNEELKELVEKAQELQQIAQPEESKPIQEITKAPEEPEKLPVCSIPQEQKHP 287
Query: 147 KSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVR 183
+ + ++ S ++ S+ I +R
Sbjct: 288 PQLPEQSPTSIPEVQAHPIQPSPPQQRTSKVIIHKIR 324
>gi|121595094|ref|YP_986990.1| TonB family protein [Acidovorax sp. JS42]
gi|222111437|ref|YP_002553701.1| protein tola [Acidovorax ebreus TPSY]
gi|120607174|gb|ABM42914.1| Cell division and transport-associated protein TolA [Acidovorax sp.
JS42]
gi|221730881|gb|ACM33701.1| protein TolA [Acidovorax ebreus TPSY]
Length = 323
Score = 39.1 bits (89), Expect = 0.69, Method: Composition-based stats.
Identities = 21/183 (11%), Positives = 55/183 (30%), Gaps = 13/183 (7%)
Query: 93 ATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTV 152
E + + + + +++ + + DKQK + + + E ++
Sbjct: 149 KKERLLAQQKAEREKAEREKAEKEKAAKAEQDKQKKLAEDKRRKAEEAREAKEAEARRQE 208
Query: 153 VVR-----PDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMH 207
+R + + R PS V +V N P R ++
Sbjct: 209 NLRRMQGLAGATGGETATGTAQRSSGPSGSYGGKVAAKVRPNIVYPDTISG--NPRAEVE 266
Query: 208 FQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPSTYKSWRNITLFFV 267
+ G ++G G + + +A+ +++ + ++ + F
Sbjct: 267 VRAAPDGTIVGARITQSSGN-----KAWDDAVIRALHRTETLPRDVDG-RVPSSLVIGFR 320
Query: 268 PSK 270
P
Sbjct: 321 PRD 323
>gi|260428082|ref|ZP_05782061.1| TonB family protein [Citreicella sp. SE45]
gi|260422574|gb|EEX15825.1| TonB family protein [Citreicella sp. SE45]
Length = 342
Score = 39.1 bits (89), Expect = 0.69, Method: Composition-based stats.
Identities = 20/249 (8%), Positives = 53/249 (21%), Gaps = 44/249 (17%)
Query: 31 VPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTK 90
P+ V+ + E + EPV + +++ L + E+ +
Sbjct: 82 EPVDPTPAEPVETVQPEPAR-PVTAQQAEPVPETPLTAEAPLPVPDAPAEDAIVALAPPE 140
Query: 91 THAT----------------------------------ENETKRSSSSKGEQALKESALL 116
A +R + + E
Sbjct: 141 ETAEVEPPEELTPPPPEETLEAEEEETPEPPTNALASSPRPVERPENLARTRPEPEPRPE 200
Query: 117 RMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQ 176
+ + K + + + + +
Sbjct: 201 PQRQTRTTQTKPERRQPQAAPQGNAERNANAGQEAGSETATATRSGAGGRSQQAGNAAAS 260
Query: 177 DAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLR 236
+ V ++ + + + F++ G + G G + L
Sbjct: 261 NYPGQVMRKLSRVPRPSLNVRGA----TVVAFRIGTNGGLAGASVARSSGSS-----ALD 311
Query: 237 ENARKAVIK 245
A + V +
Sbjct: 312 SAALRVVQR 320
>gi|194228772|ref|XP_001490995.2| PREDICTED: similar to WD repeat-containing protein 60 [Equus
caballus]
Length = 1110
Score = 39.1 bits (89), Expect = 0.69, Method: Composition-based stats.
Identities = 16/145 (11%), Positives = 39/145 (26%), Gaps = 2/145 (1%)
Query: 67 SSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQ 126
++ R+ + + + K H + + D++
Sbjct: 97 PKEDKKHREKLPPKESEMDVPEYKEHRHREPDGDTKYRERMAERDGHPSREPARGERDRE 156
Query: 127 KISKATNKEQDLQGISFAEKKSIDTVVV--RPDKKELLSKVEKSSRKRIPSQDAIAIVRN 184
K + +D EK R K + ++ R+ + A +
Sbjct: 157 KPRERRKDARDQDRGKLKEKHREQDAEKAHRRGKDREKDQDRRARREELRQAAAYHNLLG 216
Query: 185 RVIANWNIPSDFKRFKKLRVKMHFQ 209
R + W + +R K+ +
Sbjct: 217 RDVRGWQVLERAERKVPAVSKVRIE 241
>gi|51870118|ref|YP_073671.1| major outer envelope glycoprotein-like protein [Lymphocystis
disease virus - isolate China]
gi|51858326|gb|AAU11010.1| major outer envelope glycoprotein-like protein [Lymphocystis
disease virus - isolate China]
Length = 801
Score = 39.1 bits (89), Expect = 0.69, Method: Composition-based stats.
Identities = 16/175 (9%), Positives = 43/175 (24%), Gaps = 7/175 (4%)
Query: 10 SMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQ 69
S+ H+ + P+ + + + V Q ++Q
Sbjct: 259 SISKHITIQKPVVTQAPTATQKPVVTQAP---TATQKPVVTQAPTATQKPVVTQAPTATQ 315
Query: 70 ENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKIS 129
+ +V + T+ ++++ + + PV +
Sbjct: 316 KPVVTQAPTATQKPVVTQAPTATQKPVVTQAPTATQKPVVTQAPTATQKPVV----TQAP 371
Query: 130 KATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRN 184
AT K Q + +K + K + ++ +
Sbjct: 372 TATQKPVVTQAPTATQKPVVTQAPTATQKPVVTQTSTSIIPDYSIVKNFEDVYTR 426
>gi|171315529|ref|ZP_02904765.1| TonB family protein [Burkholderia ambifaria MEX-5]
gi|171099366|gb|EDT44104.1| TonB family protein [Burkholderia ambifaria MEX-5]
Length = 142
Score = 39.1 bits (89), Expect = 0.70, Method: Composition-based stats.
Identities = 9/52 (17%), Positives = 18/52 (34%), Gaps = 5/52 (9%)
Query: 204 VKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPST 255
V + F +++ G ++ G +E L + +S PS
Sbjct: 60 VVVAFTVDRSGRLVNASVYRSNGDSEAEALALAS-----LRRSAPLPAPPSK 106
>gi|298484812|ref|ZP_07002912.1| Ferric siderophore transport system, periplasmic binding protein
TonB [Pseudomonas savastanoi pv. savastanoi NCPPB 3335]
gi|298160666|gb|EFI01687.1| Ferric siderophore transport system, periplasmic binding protein
TonB [Pseudomonas savastanoi pv. savastanoi NCPPB 3335]
Length = 248
Score = 39.1 bits (89), Expect = 0.71, Method: Composition-based stats.
Identities = 15/148 (10%), Positives = 38/148 (25%), Gaps = 6/148 (4%)
Query: 108 QALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEK 167
+ ++ Q E + + + +P+K
Sbjct: 85 PKPEIVVTKKVEKPKPKPQPPKPQKKPEPPQEKPADEKPVDTPPTTAKPEKAAAPKPAPA 144
Query: 168 SSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKINVDVVG 226
+ + + + P D +R + ++ F ++ G VL + G
Sbjct: 145 PAPPSNALPSWQGDLLSHLGKYKKYPEDARRRGMQGVARLRFVVDADGNVLSYSIANSSG 204
Query: 227 GTELVRRMLRENARKAVIKSQAFRLSPS 254
L + + ++Q P
Sbjct: 205 S-----PALDRATMEMIRRAQPLPKPPK 227
>gi|241951100|ref|XP_002418272.1| e3 ubiquitin protein ligase tom1, putative; suppressor of snRNA
protein, putative; temperature-dependent organization in
mitotic nucleus protein 1, putative [Candida dubliniensis
CD36]
gi|223641611|emb|CAX43572.1| e3 ubiquitin protein ligase tom1, putative [Candida dubliniensis
CD36]
Length = 3293
Score = 39.1 bits (89), Expect = 0.71, Method: Composition-based stats.
Identities = 18/196 (9%), Positives = 55/196 (28%), Gaps = 1/196 (0%)
Query: 61 VVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPV 120
+ ++ ++ + +E ++ Q + + + + + E + + +
Sbjct: 2272 EESKAIADRKKEEQEKAQKEREEKRRKQLEEEEKRRQEEARQRQESAANIPEREPVMVRI 2331
Query: 121 SPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIA 180
D +++ ++ + V + +
Sbjct: 2332 GDRDVDISGTEIDRDYIEALPEDMREEVFASYVRERRANASSTDADVREIDPDFLDALPD 2391
Query: 181 IVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENAR 240
+R ++ + F F+ + F+L+ G + D R A
Sbjct: 2392 NIRAEILQQETMARRFANFESSSAQDEFELDDAGEDDAFEDADSNVRASGSRHSSTITAA 2451
Query: 241 KAVIKSQAFRLSPSTY 256
AV ++Q + Y
Sbjct: 2452 AAVTRAQK-KSPGKVY 2466
>gi|306830107|ref|ZP_07463291.1| endo-beta-N-acetylglucosaminidase D [Streptococcus mitis ATCC 6249]
gi|304427633|gb|EFM30729.1| endo-beta-N-acetylglucosaminidase D [Streptococcus mitis ATCC 6249]
Length = 1663
Score = 39.1 bits (89), Expect = 0.72, Method: Composition-based stats.
Identities = 17/177 (9%), Positives = 34/177 (19%), Gaps = 10/177 (5%)
Query: 29 LLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQ 88
PIS D + ++ E Q V +N
Sbjct: 79 AEQPISENTPAIADLVNEKEEAKPAPTDKTEKPAQPTDKEGVKPEETPQVADNKADKPSL 138
Query: 89 TKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKS 148
E ++ R K + N+ +
Sbjct: 139 ADVPKNEEKSLRPKEIKFDTWDDLLKWEPGAREDDP-------INRSSVELAKRHRGQLV 191
Query: 149 IDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVK 205
+ R + L + K+ + + W ++ L
Sbjct: 192 NEKASRRAKVQALANTNSKAKDHASVGGEE---FKAYAFDYWQYLDSMVFWEGLVPT 245
>gi|218439350|ref|YP_002377679.1| TonB family protein [Cyanothece sp. PCC 7424]
gi|218172078|gb|ACK70811.1| TonB family protein [Cyanothece sp. PCC 7424]
Length = 474
Score = 39.1 bits (89), Expect = 0.72, Method: Composition-based stats.
Identities = 16/171 (9%), Positives = 39/171 (22%), Gaps = 3/171 (1%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
L GL S+ +H L + + + ++ D N +P
Sbjct: 22 LAIGLVGSVAVHAAIALAIVGLYEEPTIADNPIELIIVED---NSSVPEIPEPPENKPQP 78
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
+ +E+ Q + ++ S R + P
Sbjct: 79 VTPPKPTKVTTSTPKTEESNSGGGQQQPLASAPTPPQQQLRSSPIPQTPSPPQPRPSLQP 138
Query: 123 YDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRI 173
Q + + + + + + + S +
Sbjct: 139 QPAQTPTTPDIPTETPPPTATSTPLPLTSPQQSQSILDDPSPSSPNIAAAD 189
>gi|187250857|ref|YP_001875339.1| putative periplasmic protein TonB [Elusimicrobium minutum Pei191]
gi|186971017|gb|ACC98002.1| Putative periplasmic protein TonB [Elusimicrobium minutum Pei191]
Length = 244
Score = 39.1 bits (89), Expect = 0.72, Method: Composition-based stats.
Identities = 26/222 (11%), Positives = 59/222 (26%), Gaps = 23/222 (10%)
Query: 7 LAISMILHVMFLLLLYFN-FNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
IS +LH + L+F + P++ ++D + +
Sbjct: 6 FFISGVLHALMAGFLFFVIMPASVKKPLAT---YTIDFLGASFQAPADGSD--------- 53
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
S + + + + E + + + + +S + P K
Sbjct: 54 --------SKKSDEPTPTPAAPKEEAKKEEIKKPETPVADKKAYAAKSQITTKPQPAPKK 105
Query: 126 QKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNR 185
+ + + D + AE + K+ P I VRN
Sbjct: 106 KIVLGTPSILADNEKEKKAEAAKTSAKAGSSQGEGDGVGGIKTDFPNFPFPWYITQVRNA 165
Query: 186 VIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGG 227
+ W + + + F + + G + G
Sbjct: 166 LWTEW--EKRKPKQANVAALVTFAIQRDGSIKNLKVSKASGN 205
>gi|296204397|ref|XP_002806949.1| PREDICTED: LOW QUALITY PROTEIN: titin-like [Callithrix jacchus]
Length = 34170
Score = 39.1 bits (89), Expect = 0.74, Method: Composition-based stats.
Identities = 5/97 (5%), Positives = 19/97 (19%)
Query: 29 LLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQ 88
+ E + V + +K ++ + V K + + +
Sbjct: 10762 VPKKPVPEEKVPVPAPKKVEAPPAKVPEVPKKPVPEKKVPVPAPKKVEAPPAKVPEVPKK 10821
Query: 89 TKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
+ + + +
Sbjct: 10822 LIPEEKKPTPVPKKVEAPPPKVPKKPEPVPVPVALPQ 10858
Score = 37.2 bits (84), Expect = 2.2, Method: Composition-based stats.
Identities = 14/162 (8%), Positives = 41/162 (25%), Gaps = 10/162 (6%)
Query: 29 LLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQ 88
P + E+ + + K + + L + ++
Sbjct: 10151 ESPPPAVPEI-------PKKKVPEERKPVPRKEEEVPPPKVPALPKKPVPEKKVAVPVPV 10203
Query: 89 TKTHATENETKRSS---SSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAE 145
TK K A ++ ++ + ++S + S +
Sbjct: 10204 TKKAPPPRAEVSKKTVVEEKRFVAEEKLSVAVPQTVEVMQHEVSAEEEWGYSEEEESVSI 10263
Query: 146 KKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVI 187
+ ++ E+ + ++ + I+ RV
Sbjct: 10264 SVYREEEREEEEEAEVTEYEVMEEPEEYVVEEKLHIISKRVE 10305
>gi|160899208|ref|YP_001564790.1| TonB family protein [Delftia acidovorans SPH-1]
gi|160364792|gb|ABX36405.1| TonB family protein [Delftia acidovorans SPH-1]
Length = 475
Score = 39.1 bits (89), Expect = 0.74, Method: Composition-based stats.
Identities = 16/134 (11%), Positives = 31/134 (23%), Gaps = 11/134 (8%)
Query: 114 ALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRI 173
+ P Q + K + P L K
Sbjct: 327 PSVPRHSPPLTTQSFAPPAAATDGTASSFTRIVKDLPASSAAPVPLPLDDDSLKLPPAAE 386
Query: 174 PSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRR 233
+ A + ++ RV + +++ G +
Sbjct: 387 LPRHLQAP------RLAYPEQAKRLRQEGRVVIKARIDPDGKIRRAEIDQSSSHA----- 435
Query: 234 MLRENARKAVIKSQ 247
+L E A AV+K+
Sbjct: 436 ILDEAAMAAVLKAS 449
>gi|157414424|ref|YP_001481680.1| TonB domain protein [Campylobacter jejuni subsp. jejuni 81116]
gi|157385388|gb|ABV51703.1| periplasmic protein [Campylobacter jejuni subsp. jejuni 81116]
Length = 259
Score = 39.1 bits (89), Expect = 0.74, Method: Composition-based stats.
Identities = 21/223 (9%), Positives = 69/223 (30%), Gaps = 16/223 (7%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
+++ +++ ++L++F + + +I + + ++ + Q
Sbjct: 11 SFLLALAIYISIVILVFF------RLVSEVEPAIQYTDIKDSFVDIELAEPSKQVITQSN 64
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
+ + E + + + K S+ ++ +KE +
Sbjct: 65 APKEIQKPTEQIDIEKLFAQTTNKTVKTEDIDQKASNFNELFGNIKEIQEEKTTKIQSSA 124
Query: 126 QKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNR 185
+ + + K Q + + + + ++K + + V
Sbjct: 125 KSGASSAPKPQASELVKQLNDSLLQE-------ESSTQGESTKAQKIGIYDEFLGKVVRI 177
Query: 186 VIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGT 228
+ W +K+ VK+ +++ G G +V+ G
Sbjct: 178 ITQRWTQYY--PNSEKISVKVKIFIDENGKF-GYTSVEKSGNP 217
>gi|115374635|ref|ZP_01461914.1| conserved hypothetical protein [Stigmatella aurantiaca DW4/3-1]
gi|115368401|gb|EAU67357.1| conserved hypothetical protein [Stigmatella aurantiaca DW4/3-1]
Length = 367
Score = 39.1 bits (89), Expect = 0.74, Method: Composition-based stats.
Identities = 31/285 (10%), Positives = 68/285 (23%), Gaps = 42/285 (14%)
Query: 7 LAISMILHVMFLLLLYFNFNVQLLV---PISRREMLSVDNIYNEDYHSSKYKKIEEPVVQ 63
LA S++LH+ + L + + + I + + +P +
Sbjct: 73 LATSLLLHLAWGLFIVSAAPPPEPELSLDELEDRFVRAEIIPQKLLREEPVAEKPQPSSE 132
Query: 64 FKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP- 122
K + + R ++Q + A + S +
Sbjct: 133 DKPEKPTDKKDPEEAKPTTPRPTNQAEQRAELVKKVSSKGLLKILGASGDGSGGGAFADI 192
Query: 123 ----------------------YDKQKISKATNKEQDLQGISFAEK-----------KSI 149
+ ++ + ++ + +
Sbjct: 193 LGSGTGGNEIAEALAGAGGVGVATTESVAAGGPRGGGTGSVASIGEVGTRGGGNVDLGAK 252
Query: 150 DTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQ 209
V V KE +V+ R I + + K +V + F
Sbjct: 253 KEVAVVGRVKEAAPEVDSGDVDREALSRYIRARLKAIQGCYEKELKRNPSLKGKVVVRFT 312
Query: 210 LNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPS 254
+ G + G E + + VI+S F P
Sbjct: 313 IKPSGRTSDIDIEENTLGNE-----AVGSCIRTVIRSWVFPFKPE 352
>gi|16265131|ref|NP_437923.1| hypothetical protein SM_b20676 [Sinorhizobium meliloti 1021]
gi|15141270|emb|CAC49783.1| HYPOTHETICAL PROTEIN SM_b20676 [Sinorhizobium meliloti 1021]
Length = 306
Score = 39.1 bits (89), Expect = 0.74, Method: Composition-based stats.
Identities = 12/149 (8%), Positives = 36/149 (24%)
Query: 33 ISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTH 92
++ + +SV+ + +K + E + E +
Sbjct: 33 PAKEQSVSVELVPQPKSAEKPEQKPNAAKSEQARPQPEAFESAAAPAEKEKPPQPELPPA 92
Query: 93 ATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTV 152
A + S + + + P + + + A+ +
Sbjct: 93 APKKTETPSETPEASRPAPAKTENTASEKPAESRTALAELRVDARSAANEAADAATAPPA 152
Query: 153 VVRPDKKELLSKVEKSSRKRIPSQDAIAI 181
P K +L + + ++
Sbjct: 153 AAVPQGKPVLEEARAEPTQPPEAKAEREA 181
>gi|261855193|ref|YP_003262476.1| TonB family protein [Halothiobacillus neapolitanus c2]
gi|261835662|gb|ACX95429.1| TonB family protein [Halothiobacillus neapolitanus c2]
Length = 270
Score = 39.1 bits (89), Expect = 0.75, Method: Composition-based stats.
Identities = 25/232 (10%), Positives = 60/232 (25%), Gaps = 21/232 (9%)
Query: 14 HVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLV 73
H + L L + ++ +S E V S + P + + +
Sbjct: 33 HGVVLYALLRSESISQPAQVSAPEA--VMLGTLLTQPSPVIEPEPTPEPTPEPTPEPTPE 90
Query: 74 RDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATN 133
+ + + K + + + ++ +
Sbjct: 91 PAPAPAPEPEPKPAPKPAITEPKAKPEAKPLPRPTVKKSPPQTKARPTNKAVESLATVQH 150
Query: 134 KEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIP 193
D A + + V V+ + +++ + P A
Sbjct: 151 SLSDSSQAEKAPTIATNPVPVQTPPPVVQPRLDARAGNNPPPDYPRAA------------ 198
Query: 194 SDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIK 245
KR ++ V + + G V G +L ++A KA+ +
Sbjct: 199 --RKRGQEGTVVLSLVIGADGSVQDVSVKRSSG-----YPLLDQSAVKAIRR 243
>gi|33598301|ref|NP_885944.1| proline-rich inner membrane protein [Bordetella parapertussis
12822]
gi|33566859|emb|CAE39074.1| Proline-rich inner membrane protein [Bordetella parapertussis]
Length = 373
Score = 39.1 bits (89), Expect = 0.75, Method: Composition-based stats.
Identities = 12/89 (13%), Positives = 19/89 (21%), Gaps = 6/89 (6%)
Query: 165 VEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFK-RFKKLRVKMHFQLNQKGFVLGKINVD 223
+++ A VR V P + + QL G V G
Sbjct: 273 ADRNQAGGGRDSGYGAKVRACVQPGVAYPPPPRAGSANPTAQYRVQLGSDGKVNGVTLTS 332
Query: 224 VVGGTELVRRMLRENARKAVIKSQAFRLS 252
G + + F
Sbjct: 333 SSGNPG-----FDRAVETGIRRCNPFPKP 356
>gi|308187024|ref|YP_003931155.1| TonB protein [Pantoea vagans C9-1]
gi|308057534|gb|ADO09706.1| TonB protein [Pantoea vagans C9-1]
Length = 273
Score = 38.7 bits (88), Expect = 0.75, Method: Composition-based stats.
Identities = 26/244 (10%), Positives = 65/244 (26%), Gaps = 32/244 (13%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPV 61
R + +S+ LH + + + + Q++ + +SV + +P
Sbjct: 35 RTPVSMLLSVALHGVVIAGILYASFQQVIEVPKASQPISVTMV----------APEVQPE 84
Query: 62 VQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVS 121
+ + + + A + + E +
Sbjct: 85 PAPAIAEPPAPQPEPQPEPEPEPQPVPEPPKAEPVPIPKPEPKPKPKPKPEHKREQPKRE 144
Query: 122 PYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAI 181
+Q+ + + + ++ + P S K Q A A+
Sbjct: 145 VKPRQESKPEADPFKQQAPATQSKPATAPKATPAPTASASNGPKALSVSKPGYPQRAFAL 204
Query: 182 VRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARK 241
+ RV++ F ++ G V + + R M ++
Sbjct: 205 -----------------RVEGRVRVKFDVDSDGRVDNIQIL-----SAEPRNMFEREVKQ 242
Query: 242 AVIK 245
A+ K
Sbjct: 243 AMKK 246
>gi|301155737|emb|CBW15205.1| membrane anchored protein in TolA-TolQ-TolR complex [Haemophilus
parainfluenzae T3T1]
Length = 425
Score = 38.7 bits (88), Expect = 0.75, Method: Composition-based stats.
Identities = 14/123 (11%), Positives = 36/123 (29%), Gaps = 12/123 (9%)
Query: 147 KSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKM 206
+ + + +++ + + F ++
Sbjct: 309 SASKGGNANKGGTQGSGAGLGAGDGGKVGDQYAGVIKREIQRRFLKDPSFAGK---VCRI 365
Query: 207 HFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPST--YKSWRNITL 264
QL + G +L V G + + A AV +++ +PS Y+ ++ +
Sbjct: 366 KIQLGRDGTILAYQRV--SGPDD-----ICTAAMSAVARTKKVPAAPSDAVYEKYKAPAI 418
Query: 265 FFV 267
F
Sbjct: 419 DFD 421
>gi|157826564|ref|YP_001495628.1| VirB6 [Rickettsia bellii OSU 85-389]
gi|157801868|gb|ABV78591.1| VirB6 [Rickettsia bellii OSU 85-389]
Length = 1039
Score = 38.7 bits (88), Expect = 0.75, Method: Composition-based stats.
Identities = 22/177 (12%), Positives = 44/177 (24%), Gaps = 7/177 (3%)
Query: 61 VVQFKGSSQENLVRDFS----VQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALL 116
SQ V E + + + E++ + SS + A+
Sbjct: 863 KPIEAPVSQPTTVSTQIDTAIKTEPPKVSAAEVVRNTAEDKLEDLSSKLNVTKEIKEAVP 922
Query: 117 RMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQ 176
+ ++ T E +L + + K E + +
Sbjct: 923 ESQKEEPKEPRVKHTTEVEPELNLDENLGVTRTIRGLDKDRKFTEQESHELKIGEAGYVK 982
Query: 177 DAI--AIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLG-KINVDVVGGTEL 230
+ A +R+R A + R R K G + +D
Sbjct: 983 QEMRNAQIRDRRAAFEKETEELYRSGGGRAKDKATERNDGTIENRSKKIDSGSDENP 1039
>gi|86151429|ref|ZP_01069644.1| TonB domain protein [Campylobacter jejuni subsp. jejuni 260.94]
gi|85841776|gb|EAQ59023.1| TonB domain protein [Campylobacter jejuni subsp. jejuni 260.94]
gi|315931505|gb|EFV10472.1| tonB domain protein [Campylobacter jejuni subsp. jejuni 327]
Length = 259
Score = 38.7 bits (88), Expect = 0.76, Method: Composition-based stats.
Identities = 21/223 (9%), Positives = 70/223 (31%), Gaps = 16/223 (7%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
+++ +++ ++L++F + + +I + + ++ + Q
Sbjct: 11 SFLLALAIYISIVILVFF------RLVSEVEPAIQYTDIKDSFVDIELAEPSKQVITQSN 64
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
+ + E + + + K S+ ++ + +KE +
Sbjct: 65 TPKEIQKPTEQIDIEKLFAQTTNKTVKTEDIDQKASNFNELFENIKEIQEEKTTKIQSSA 124
Query: 126 QKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNR 185
+ + + K Q + + + + ++K + + V
Sbjct: 125 KSGASSAPKPQASELVKQLNDSLLQE-------ESSTQGESTKAQKIGIYDEFLGKVVRI 177
Query: 186 VIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGT 228
+ W +K+ VK+ +++ G G +V+ G
Sbjct: 178 ITQRWTQYY--PNSEKISVKVKIFIDENGKF-GYTSVEKSGNP 217
>gi|330446167|ref|ZP_08309819.1| tonB family C-terminal domain protein [Photobacterium leiognathi
subsp. mandapamensis svers.1.1.]
gi|328490358|dbj|GAA04316.1| tonB family C-terminal domain protein [Photobacterium leiognathi
subsp. mandapamensis svers.1.1.]
Length = 269
Score = 38.7 bits (88), Expect = 0.78, Method: Composition-based stats.
Identities = 33/241 (13%), Positives = 73/241 (30%), Gaps = 15/241 (6%)
Query: 10 SMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYN-----EDYHSSKYKKIEEPVVQF 64
S++ H + + + + VPIS +SV+ + E + EP+
Sbjct: 13 SILFHSLLVSAM--PDKKIITVPISEPASVSVNLVSLPIAKPEPVIQPIVETPVEPIKPV 70
Query: 65 KGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYD 124
+ + + + K + + ++ K K +
Sbjct: 71 AKTMTPAPKTEMKKLVQKTKPVTKPKAEPKKKAVPKKTAPKKTVTKKAEVKKPVQNKTVK 130
Query: 125 KQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRN 184
K + +K + K + +VV K + SS ++ S+ A
Sbjct: 131 KAQPTKPITTSKKFTLDKPNNKPATKSVVEVNKKTKNQQATLGSSEPQLVSKPTFA---T 187
Query: 185 RVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVI 244
+ +R + V + + + G L + G + +L + A KA+
Sbjct: 188 KPSPVSYPRLAKRRGIEGTVLVEVLIGKDGKQLKQKLAKSSGAS-----VLDKAALKAIK 242
Query: 245 K 245
Sbjct: 243 L 243
>gi|253686554|ref|YP_003015744.1| TonB family protein [Pectobacterium carotovorum subsp. carotovorum
PC1]
gi|251753132|gb|ACT11208.1| TonB family protein [Pectobacterium carotovorum subsp. carotovorum
PC1]
Length = 287
Score = 38.7 bits (88), Expect = 0.78, Method: Composition-based stats.
Identities = 27/224 (12%), Positives = 57/224 (25%), Gaps = 32/224 (14%)
Query: 25 FNVQLLVPISRR---EMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQEN 81
F+ P++ + +S++ + + + E VV +V
Sbjct: 66 FSSASTPPVTVPARPQPISIELVAAVAEPVLQAEPAEPEVVAPPPELTPPVVDKPV---- 121
Query: 82 GDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGI 141
+ E + + + + + P K T
Sbjct: 122 ---DDNALLPPEPEKKEPERKAPEKKPEPAPKKVAVKKNPPAPTPKPQAETVSASAPVTP 178
Query: 142 SFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKK 201
+ ++++ V P L + + AI R +
Sbjct: 179 APVAQQAVAPPVDAPLTPPLANADYLHNPAPSYPDVAI-----------------SRGYE 221
Query: 202 LRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIK 245
V ++ Q+ G V G L E AR V++
Sbjct: 222 GTVLLNVQVRADGKVQTIRIHQSSG-----YPSLDEAARDTVLR 260
>gi|282859025|ref|ZP_06268161.1| translation initiation factor IF-2 [Prevotella bivia JCVIHMP010]
gi|282588193|gb|EFB93362.1| translation initiation factor IF-2 [Prevotella bivia JCVIHMP010]
Length = 964
Score = 38.7 bits (88), Expect = 0.79, Method: Composition-based stats.
Identities = 20/146 (13%), Positives = 44/146 (30%), Gaps = 5/146 (3%)
Query: 29 LLVPISRREMLSVD-NIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSD 87
PI++ E SV+ + E+ V + QE V + E
Sbjct: 106 TNKPIAKAETKSVETEKPIVKAPVKEIGAKEQKVEKAVAPKQETPVVKEAKVEKQPAKPV 165
Query: 88 QTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKK 147
+ K+ + + + + + K +S+ K K
Sbjct: 166 EQKSEVSTEKKQDKQAEIKNETPKVLVNTEKKAEAV----VSQGETKAATEVKDDGIFKT 221
Query: 148 SIDTVVVRPDKKELLSKVEKSSRKRI 173
+ ++ K +L K++ S+ +
Sbjct: 222 KNEEKMLNTPKVNVLGKIDLSTLNQS 247
>gi|289646383|ref|ZP_06477726.1| ferric siderophore transporter, periplasmic energy transduction
protein TonB [Pseudomonas syringae pv. aesculi str.
2250]
Length = 248
Score = 38.7 bits (88), Expect = 0.79, Method: Composition-based stats.
Identities = 15/148 (10%), Positives = 38/148 (25%), Gaps = 6/148 (4%)
Query: 108 QALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEK 167
+ ++ Q E + + + +P+K
Sbjct: 85 PKPEIVVPKKVEKPKPKPQPPKPQKKPEPPQEKPADEKPVDTPPTTAKPEKAAAPKPAPA 144
Query: 168 SSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKINVDVVG 226
+ + + + P D +R + ++ F ++ G VL + G
Sbjct: 145 PATPSNALPSWQGDLLSHLGKYKKYPEDARRRGMQGVARLRFVVDADGNVLSYSIANSSG 204
Query: 227 GTELVRRMLRENARKAVIKSQAFRLSPS 254
L + + ++Q P
Sbjct: 205 S-----PALDRATMEMIRRAQPLPKPPK 227
>gi|327539544|gb|EGF26154.1| conserved hypothetical protein, membrane [Rhodopirellula baltica
WH47]
Length = 634
Score = 38.7 bits (88), Expect = 0.80, Method: Composition-based stats.
Identities = 18/200 (9%), Positives = 47/200 (23%), Gaps = 22/200 (11%)
Query: 7 LAISMILHVMFLLLL-YFNFNVQLLVPISR----------------REMLSVDNIYNEDY 49
L +S+ LH + ++ + + P+S EML + + +
Sbjct: 70 LILSVALHGVLIVYVPKLSVFWSGGGPVSDSAADAGAADIAVSMFDPEML--ETLQDSSE 127
Query: 50 H---SSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKG 106
SS ++ P E + ++ + + S +
Sbjct: 128 AHIESSPLAALKLPEPLIPEREVEMDSSEPLATDDSNHEPESDIAPPAVEIPLPSMPATL 187
Query: 107 EQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVE 166
A + + + D + A+ +
Sbjct: 188 ASAAIPTQPAPTESVDTEAAATDALDSSIDDWLQTALADPVEEPAKETLEQSSPEMISPS 247
Query: 167 KSSRKRIPSQDAIAIVRNRV 186
S + + ++
Sbjct: 248 SRSGESQTVRSTDDDADAKI 267
>gi|237756445|ref|ZP_04584983.1| siderophore-mediated iron transport protein [Sulfurihydrogenibium
yellowstonense SS-5]
gi|237691393|gb|EEP60463.1| siderophore-mediated iron transport protein [Sulfurihydrogenibium
yellowstonense SS-5]
Length = 275
Score = 38.7 bits (88), Expect = 0.80, Method: Composition-based stats.
Identities = 29/253 (11%), Positives = 73/253 (28%), Gaps = 6/253 (2%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
LA+S+++H + + ++ E + KKI +
Sbjct: 12 SLALSLLIHALLFSSFLLLKPKPKEEKEKIITVSLDEDFKKEFKPPVEEKKIIQKNEALP 71
Query: 66 GSSQENLVRDFSV--QENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPY 123
+ V + + Q+ E + S +Q ++ + P
Sbjct: 72 KTKPSPKVEEKKIVQQKETLPPPQPAPKPQLEKPIVKPESETPKQEAQKPEEKQNTQQPT 131
Query: 124 DKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVR 183
+ ++ + + + + + +K ++ I +
Sbjct: 132 QQNPPQTQPTQQTQPAVTQTPKTEPTPIDLSKGRPDQFKQPEKKEEDIDGYLKELIRYLN 191
Query: 184 NRVIANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKA 242
+ P KR K + +V + +N+ G + V +L + A +
Sbjct: 192 QQARERDLYPPIAKRLKIEGQVIVRVTINEDGTIDENSIKIVDSSG---YNVLDKGAIEI 248
Query: 243 VIKSQAFRLSPST 255
+ K Q ++ P
Sbjct: 249 LKKLQPYKKPPKR 261
>gi|317010022|gb|ADU80602.1| siderophore-mediated iron transport protein [Helicobacter pylori
India7]
Length = 281
Score = 38.7 bits (88), Expect = 0.81, Method: Composition-based stats.
Identities = 32/255 (12%), Positives = 78/255 (30%), Gaps = 13/255 (5%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
IS L+ + YF P+++ V +SK K E +
Sbjct: 18 SFLISFALYA--IGFGYFLLREDAPAPLAQAGTTKVTMSLASINTNSKVKTNAESAKPKE 75
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
++ ++ + + + + + + K + P K
Sbjct: 76 EPKEKPKKEKPKKEKPKKEVTKPKPKPKPKPKPEPKPKPEPKPEPKPEPKVEEPKKEEPK 135
Query: 126 QKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKR-----IPSQDAIA 180
++ K KE+ + + + + D V + ++E + ++ + S + +
Sbjct: 136 EEPKKEEAKEEAKEKSAPKQVTTKDIVKEKDKQEESNKTSDGATSEAQAYNPGVSNEFLM 195
Query: 181 IVRNRVIANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENA 239
++ + + P + + V + F +N G V V +L A
Sbjct: 196 KIQTAISSKNRYPKMAQIRGIEGEVLVSFVINPDGSVTDIKVVKSNTTD-----ILNHAA 250
Query: 240 RKAVIKSQAFRLSPS 254
+A+ + P
Sbjct: 251 LEAIKSAAHLFPKPE 265
>gi|292670666|ref|ZP_06604092.1| conserved hypothetical protein [Selenomonas noxia ATCC 43541]
gi|292647693|gb|EFF65665.1| conserved hypothetical protein [Selenomonas noxia ATCC 43541]
Length = 267
Score = 38.7 bits (88), Expect = 0.81, Method: Composition-based stats.
Identities = 23/252 (9%), Positives = 54/252 (21%), Gaps = 11/252 (4%)
Query: 4 ENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQ 63
+S ++H++ LLL V + ++ +D D+ +
Sbjct: 8 SKAYIVSAVIHLVIFLLLAIGLAVVVAE--KEQQTYEIDL-QASDFSQGSGHAGGGGGSE 64
Query: 64 FKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPY 123
E + + + + S Q+ +
Sbjct: 65 SLFPEPLKAEEVAKRVETVQQTMPTVHPVSETVAPVQDAVSPPTQSSASTPSAASSTGTS 124
Query: 124 DKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAI-- 181
+ + S + + +
Sbjct: 125 TGGEPGSGSGSGGGNGSGSGTGSGDGTGDGQGVGEGSGAGQGSGNGNVSGTGNVPFDKEG 184
Query: 182 VRNRVIANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENAR 240
V AN P + + + + ++ G + G + +L E A
Sbjct: 185 FWAAVNANKEYPYMAMKRQIEGTTTIITTISASGVITNVSVASSSGNS-----LLDEAAV 239
Query: 241 KAVIKSQAFRLS 252
A F
Sbjct: 240 NAAYAVGTFPNP 251
>gi|255690362|ref|ZP_05414037.1| putative TonB protein [Bacteroides finegoldii DSM 17565]
gi|260624167|gb|EEX47038.1| putative TonB protein [Bacteroides finegoldii DSM 17565]
Length = 474
Score = 38.7 bits (88), Expect = 0.81, Method: Composition-based stats.
Identities = 13/64 (20%), Positives = 22/64 (34%), Gaps = 1/64 (1%)
Query: 181 IVRNRVIANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENA 239
+ + N P KR K + + M +++ G V + V L E A
Sbjct: 382 KLMEFIRQNIQYPETAKRSKLEGTIVMQVVIDKDGTVTQPRILRSVNPVLSADAALCEEA 441
Query: 240 RKAV 243
+ V
Sbjct: 442 LRIV 445
>gi|261315959|ref|ZP_05955156.1| TonB-dependent receptor [Brucella pinnipedialis M163/99/10]
gi|261304985|gb|EEY08482.1| TonB-dependent receptor [Brucella pinnipedialis M163/99/10]
Length = 147
Score = 38.7 bits (88), Expect = 0.83, Method: Composition-based stats.
Identities = 13/106 (12%), Positives = 30/106 (28%), Gaps = 2/106 (1%)
Query: 136 QDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSD 195
+ + + E S+ + + +++ + N
Sbjct: 19 AEKAAETREASAPRVDADNGAKVAA-SKRGETSASAGVIWAKWTSRLQSHMARNARFLQG 77
Query: 196 FKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARK 241
R + + F ++ G VL G + + L E AR+
Sbjct: 78 KSRNTRGEAHVAFVIDPSGNVLSARIAVSSGDPAVDQLAL-EAARR 122
>gi|225011428|ref|ZP_03701866.1| conserved hypothetical protein [Flavobacteria bacterium MS024-2A]
gi|225003931|gb|EEG41903.1| conserved hypothetical protein [Flavobacteria bacterium MS024-2A]
Length = 283
Score = 38.7 bits (88), Expect = 0.83, Method: Composition-based stats.
Identities = 18/190 (9%), Positives = 42/190 (22%), Gaps = 14/190 (7%)
Query: 42 DNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRS 101
K +P + +E ++ D +
Sbjct: 49 TLAQGSGSVQPKKPVAAQPAEVQENQIEEKQEVTPPPINTPEKTPDVLTEKES-IVAVPK 107
Query: 102 SSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKEL 161
GE+ E P+ ++ + K + + + K V +
Sbjct: 108 IQETGEKVQPEKKAKEEPIETPPEKVVPKVSEATKSVVSNLLKNKTQEGDQVAGEGDDSV 167
Query: 162 LSKVEKSSRKRIPSQDAIAIVR-----------NRVIANWNIPSDFKRFKKLRVKMHFQL 210
K S + N + + ++ V + +
Sbjct: 168 QGDKGKIDGNPYASSYYNTAGLGGRGKGFGLNGRNLQTNGKVIQ--ECNQEGTVVVRITV 225
Query: 211 NQKGFVLGKI 220
N +G V+
Sbjct: 226 NNQGNVIAAE 235
>gi|329769564|ref|ZP_08260972.1| hypothetical protein HMPREF0433_00736 [Gemella sanguinis M325]
gi|328838610|gb|EGF88212.1| hypothetical protein HMPREF0433_00736 [Gemella sanguinis M325]
Length = 1019
Score = 38.7 bits (88), Expect = 0.83, Method: Composition-based stats.
Identities = 9/150 (6%), Positives = 26/150 (17%)
Query: 28 QLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSD 87
V+ + + + + S E
Sbjct: 839 PAEPEKPTEPEKPVEPEKPTEPEKPAEPEKPAEPEKPAEPEKPAEPEKPSEPEKPTEPEK 898
Query: 88 QTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKK 147
+ K + K + K + + ++ +K
Sbjct: 899 PAEPEKPVEPEKPAEPEKPAEPEKPVDPEKPAEPEKPAEPEKPTEPEKPAEPEKPTEPEK 958
Query: 148 SIDTVVVRPDKKELLSKVEKSSRKRIPSQD 177
+ +K + K +
Sbjct: 959 PAEPEKPSKPEKPSEPEKPSEPEKPSEPEK 988
Score = 38.3 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 8/150 (5%), Positives = 26/150 (17%)
Query: 28 QLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSD 87
V+ + + + + + E
Sbjct: 821 PSEPEKPSEPEKPVEPEKPAEPEKPTEPEKPVEPEKPTEPEKPAEPEKPAEPEKPAEPEK 880
Query: 88 QTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKK 147
+ K + K + K + + ++ +K
Sbjct: 881 PAEPEKPSEPEKPTEPEKPAEPEKPVEPEKPAEPEKPAEPEKPVDPEKPAEPEKPAEPEK 940
Query: 148 SIDTVVVRPDKKELLSKVEKSSRKRIPSQD 177
+ +K + K +
Sbjct: 941 PTEPEKPAEPEKPTEPEKPAEPEKPSKPEK 970
Score = 37.2 bits (84), Expect = 2.7, Method: Composition-based stats.
Identities = 9/123 (7%), Positives = 24/123 (19%)
Query: 28 QLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSD 87
V+ + + + + + E
Sbjct: 893 PTEPEKPAEPEKPVEPEKPAEPEKPAEPEKPVDPEKPAEPEKPAEPEKPTEPEKPAEPEK 952
Query: 88 QTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKK 147
T+ K S K + K S + + ++ +K
Sbjct: 953 PTEPEKPAEPEKPSKPEKPSEPEKPSEPEKPSEPEKPAEPEKPVEPEKPVEPEKPAEPEK 1012
Query: 148 SID 150
++
Sbjct: 1013 PVE 1015
>gi|315127967|ref|YP_004069970.1| hypothetical protein PSM_A2906 [Pseudoalteromonas sp. SM9913]
gi|315016481|gb|ADT69819.1| hypothetical protein PSM_A2906 [Pseudoalteromonas sp. SM9913]
Length = 221
Score = 38.7 bits (88), Expect = 0.84, Method: Composition-based stats.
Identities = 19/171 (11%), Positives = 45/171 (26%), Gaps = 2/171 (1%)
Query: 4 ENGLAISMILHVM-FLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
+ +S+ LH + L ++ + V+ ++ V
Sbjct: 5 RTAIILSVCLHGLVLFFLTTLKAPKIKQPQLTPIKAYMVNVPAKTKVTQQATQQSANKNV 64
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
+ + + + S N + T T ++ + K+ L + S
Sbjct: 65 NTEITPTKPVNATQSKPLNATNKKTKETTEPVST-TSINTHPVTATSYKKIDLKKGLNSI 123
Query: 123 YDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRI 173
+Q T K + K+ V ++ + R
Sbjct: 124 LQQQTGYSDTAKNDPQKKRITVPKEHAGKVKPLLKIEQQNMQFTTYRRGDS 174
>gi|283955277|ref|ZP_06372777.1| putative periplasmic protein [Campylobacter jejuni subsp. jejuni
414]
gi|283793191|gb|EFC31960.1| putative periplasmic protein [Campylobacter jejuni subsp. jejuni
414]
Length = 259
Score = 38.7 bits (88), Expect = 0.86, Method: Composition-based stats.
Identities = 21/223 (9%), Positives = 67/223 (30%), Gaps = 16/223 (7%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
+++ +++ ++L++F + + +I + + ++ + Q
Sbjct: 11 SFLLALAIYISIIILVFF------RLISEVEPAIQYTDIKDSFVDIELAEPSKQLITQNN 64
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
+ + E + + + K S+ ++ +KE +
Sbjct: 65 TLKEIQKPTEQVDIEKLFAQTTNKTVKTEDIDQKASNFNELFGNIKEIQEEKTTKIQSSA 124
Query: 126 QKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNR 185
+ + K Q + + + + K+ + + V
Sbjct: 125 KSGVSSAPKPQASELVKQLNDSLLQEESSMQGESTKAQKI-------GIYDEFLGKVVRI 177
Query: 186 VIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGT 228
+ W +K+ VK+ +++ G G +V+ G
Sbjct: 178 ITQRWTQYY--PNSEKISVKVKIFIDENGKF-GYTSVEKSGNP 217
>gi|42524267|ref|NP_969647.1| siderophore-mediated iron transport protein [Bdellovibrio
bacteriovorus HD100]
gi|39576475|emb|CAE80640.1| siderophore-mediated iron transport protein [Bdellovibrio
bacteriovorus HD100]
Length = 244
Score = 38.7 bits (88), Expect = 0.88, Method: Composition-based stats.
Identities = 19/189 (10%), Positives = 53/189 (28%), Gaps = 12/189 (6%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDN-------IYNEDYHSSKYK 55
+ + +S++LH L + P + V+ + S
Sbjct: 34 INRSVTLSVLLHGGLFALAV-----GMAAPEVVPLPVGVELQYGDGGSVQAPQPESQIKA 88
Query: 56 KIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESAL 115
+ V S + + + + + + + + E +
Sbjct: 89 AKMKAPVVADNSEGPAIKTEKVSEAAPEPVPMGKAAGSLAGTSAQGALEGREGVANGIEV 148
Query: 116 LRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPS 175
Y+ +K+ + + L K + D L +++ + + +
Sbjct: 149 SPEQRYLYEIKKLLERRKRYPMLAKKMGQTGKVTMRFTLAQDGSLLTTEIVEKTPYDSLN 208
Query: 176 QDAIAIVRN 184
Q A+ +V+
Sbjct: 209 QAALDLVKG 217
>gi|195346397|ref|XP_002039752.1| GM15727 [Drosophila sechellia]
gi|194135101|gb|EDW56617.1| GM15727 [Drosophila sechellia]
Length = 831
Score = 38.7 bits (88), Expect = 0.88, Method: Composition-based stats.
Identities = 19/169 (11%), Positives = 48/169 (28%), Gaps = 16/169 (9%)
Query: 26 NVQLLVPISRREMLSVDN---------IYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDF 76
+PI ++ +D+ + E ++ + V +EN
Sbjct: 477 PPLPPLPIDEVHVVPIDSKNSETDLKNLPVEAVEANPPEDKPLDVNLTVDKPKENPPAAV 536
Query: 77 SVQENGDRF-------SDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKIS 129
+ + S+ A + E ++ + E LL+ + +K+
Sbjct: 537 ASLPDKPEIGSSLLSASNTIDGAAIKKEEDVAAEEQKESKANADELLKTQKELKETKKLL 596
Query: 130 KATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDA 178
T E + + + + + ++KV +K
Sbjct: 597 AKTVGELNEELAKKNSFNQPPLELQKDKPLDAVAKVAGEPKKAEIKLKE 645
>gi|28210293|ref|NP_781237.1| hypothetical protein CTC00555 [Clostridium tetani E88]
gi|28202729|gb|AAO35174.1| hypothetical protein CTC_00555 [Clostridium tetani E88]
Length = 324
Score = 38.7 bits (88), Expect = 0.88, Method: Composition-based stats.
Identities = 20/132 (15%), Positives = 37/132 (28%)
Query: 18 LLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFS 77
+L+++F F+ ++DN N K+ EE + K E +
Sbjct: 68 ILIMFFTFSFLKYNRFMNDNSPTIDNDNNGKNVVLDNKEKEEKLDNPKEKIDEKKEVKDT 127
Query: 78 VQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQD 137
EN + K + KE + K+ + KE+
Sbjct: 128 KNENIKEKDPNEGQPKKPKDNKIVNGGDNTPTNKEKTQPNKHIKNPKKENPKPSQGKEKP 187
Query: 138 LQGISFAEKKSI 149
K+
Sbjct: 188 KLSEEQMLAKAE 199
>gi|126336417|ref|XP_001375664.1| PREDICTED: similar to TatD DNase domain-containing
deoxyribonuclease 2 [Monodelphis domestica]
Length = 894
Score = 38.7 bits (88), Expect = 0.89, Method: Composition-based stats.
Identities = 18/177 (10%), Positives = 48/177 (27%), Gaps = 7/177 (3%)
Query: 11 MILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQE 70
+ H L F+F L + S + ++ S E V Q +
Sbjct: 170 VGFHFEILYGFVFSFPPMPLK----LMVASQEVDSKDEAESQSNSMEEAVVTQKMKRRVK 225
Query: 71 NLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVS---PYDKQK 127
+ + ++ + E ++ + K + V+ P +++
Sbjct: 226 DQGSTMIYLKALQGILGKSIPRKKDKEAVKAEQVQDSSPRKREESGKRSVTVPFPVKEKQ 285
Query: 128 ISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRN 184
+ ++ + D +K + + S+ ++N
Sbjct: 286 QQLPESSKEVDKAEKGNLSSVRDAQGDSSEKPPSNQRTVIEKSEEPHSEGQRENIQN 342
>gi|153952317|ref|YP_001397365.1| TonB domain-containing protein [Campylobacter jejuni subsp. doylei
269.97]
gi|152939763|gb|ABS44504.1| TonB domain protein [Campylobacter jejuni subsp. doylei 269.97]
Length = 259
Score = 38.7 bits (88), Expect = 0.89, Method: Composition-based stats.
Identities = 21/223 (9%), Positives = 67/223 (30%), Gaps = 16/223 (7%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
+++++++ ++L++F + + +I + + ++ + Q
Sbjct: 11 SFLLALVIYISIVILVFF------RLVSEVEPAIQYTDIKDSFVDIELAEPSKQVITQSN 64
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
+ + E + + + K S+ + +KE +
Sbjct: 65 TPKEIQKPTEQIDIERLFAQTTNKTVKTEDIDQKASNFNDLFGNIKEIQEEKTTKIQSSA 124
Query: 126 QKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNR 185
+ + K Q + + + ++K + + V
Sbjct: 125 KSGISSAPKPQASELVKQLNDSL-------LQGESSTQGESTKAQKIGIYDEFLGKVARI 177
Query: 186 VIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGT 228
+ W +K+ VK+ +++ G G +V+ G
Sbjct: 178 ITQRWTQYY--PNSEKISVKVKIFIDENGKF-GYTSVEKSGNP 217
>gi|148258206|ref|YP_001242791.1| hypothetical protein BBta_7000 [Bradyrhizobium sp. BTAi1]
gi|146410379|gb|ABQ38885.1| putative exported protein of unknown function [Bradyrhizobium sp.
BTAi1]
Length = 154
Score = 38.7 bits (88), Expect = 0.90, Method: Composition-based stats.
Identities = 14/89 (15%), Positives = 29/89 (32%), Gaps = 6/89 (6%)
Query: 165 VEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDV 224
+ K + + R+ A P + ++ F L+ G ++ ++
Sbjct: 24 AAAENSKELLKGTWAQEIVARLRAERRYPLQASG-QGGHARVMFHLDGAGHLISVALMES 82
Query: 225 VGGTELVRRMLRENARKAVIKSQAFRLSP 253
G +L A V ++Q F P
Sbjct: 83 TGDA-----LLDREALAMVERAQPFPSPP 106
>gi|307747068|gb|ADN90338.1| TonB domain protein [Campylobacter jejuni subsp. jejuni M1]
Length = 259
Score = 38.7 bits (88), Expect = 0.91, Method: Composition-based stats.
Identities = 21/223 (9%), Positives = 69/223 (30%), Gaps = 16/223 (7%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
+++ +++ ++L++F + + +I + + ++ + Q
Sbjct: 11 SFLLALAIYISIVILVFF------RLVSEVEPAIQYTDIKDSFVDIELAEPSKQVITQSN 64
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
+ + E + + + K S+ ++ +KE +
Sbjct: 65 TPKEIQKPTEQIDIEKLFAQTTNKTVKTEDIDQKASNFNELFGNIKEIQEEKTTKIQSSA 124
Query: 126 QKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNR 185
+ + + K Q + + + + ++K + + V
Sbjct: 125 KSGASSAPKPQASELVKQLNDSLLQE-------ESSTQGESTKAQKIGIYDEFLGKVVRI 177
Query: 186 VIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGT 228
+ W +K+ VK+ +++ G G +V+ G
Sbjct: 178 ITQRWTQYY--PNSEKISVKVKIFIDENGKF-GYTSVEKSGNP 217
>gi|32265854|ref|NP_859886.1| TonB-like protein [Helicobacter hepaticus ATCC 51449]
gi|32261903|gb|AAP76952.1| TonB-like protein [Helicobacter hepaticus ATCC 51449]
Length = 242
Score = 38.7 bits (88), Expect = 0.91, Method: Composition-based stats.
Identities = 31/244 (12%), Positives = 70/244 (28%), Gaps = 67/244 (27%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDY-HSSKYKKIEEPVVQF 64
G +S +LH F + LY +F+ +VD N D + + P +
Sbjct: 41 GFVLSFVLHFAFAISLYEHFH-------------NVDFQQNGDNITTLTLATFQTPSQEE 87
Query: 65 KGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYD 124
+ + + + ++ + +Q K E E+ + + K + K +
Sbjct: 88 IENPKPKPLVHKTKHQHKEIIKEQGKLAKKEEESPINKAPKAKPNEKTEEGEIIQTL--- 144
Query: 125 KQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRN 184
S K D + +++
Sbjct: 145 --------------------------------------------SYKNGSEDDLFSKIKS 160
Query: 185 RVIANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAV 243
+ P+ ++ + V + F +++ G V + + A A+
Sbjct: 161 AIDRKSKYPTMARKRGLEGEVIVEFIIHKDGKVSNIRVIKAN-----QYELFNTAAVNAI 215
Query: 244 IKSQ 247
K+Q
Sbjct: 216 KKAQ 219
>gi|187736347|ref|YP_001878459.1| hypothetical protein Amuc_1864 [Akkermansia muciniphila ATCC
BAA-835]
gi|187426399|gb|ACD05678.1| hypothetical protein Amuc_1864 [Akkermansia muciniphila ATCC
BAA-835]
Length = 405
Score = 38.7 bits (88), Expect = 0.92, Method: Composition-based stats.
Identities = 21/198 (10%), Positives = 44/198 (22%), Gaps = 2/198 (1%)
Query: 34 SRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHA 93
+ HS K + K + Q + + +
Sbjct: 169 PLEPSMPPAGHPGSLAHSPVKKGEPGKSEEEKTARQNIRHAQEKAMQLPHAVVLPSPGDS 228
Query: 94 TENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVV 153
+ + + + L + K + +
Sbjct: 229 EKPDPLEELAKSIAKGADNPPLNLPNLDLVPNTKPVQKQPLYDPMFNAESQPGFKTHERK 288
Query: 154 VRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFK--KLRVKMHFQLN 211
+ K + + P AIV + W D R V++ +N
Sbjct: 289 TKQVGKFSFGRRPTLDVEATPMGTYQAIVYRAIGEQWYRQCDLNRDLIVTGTVRIRILIN 348
Query: 212 QKGFVLGKINVDVVGGTE 229
+ G + VG +E
Sbjct: 349 KNGKISSMRQTSRVGASE 366
>gi|323136893|ref|ZP_08071973.1| TonB family protein [Methylocystis sp. ATCC 49242]
gi|322397654|gb|EFY00176.1| TonB family protein [Methylocystis sp. ATCC 49242]
Length = 338
Score = 38.7 bits (88), Expect = 0.93, Method: Composition-based stats.
Identities = 21/167 (12%), Positives = 51/167 (30%), Gaps = 1/167 (0%)
Query: 7 LAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKG 66
+ + ++LH L L + L+P + E + V+ I + EP +
Sbjct: 41 ILLCLLLHAAILAFLLWEDQRNALLPPAIEE-IPVEVITEPPPQPKEEPPPPEPPQPEQK 99
Query: 67 SSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQ 126
+ ++ E + D K + E + + E K + ++ Q
Sbjct: 100 AEEQKQKPPPPPTEIEEPAFDAPKLESKEKSEQNAPEEAKEAKTKRNEPEKLAPKDEKPQ 159
Query: 127 KISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRI 173
+ A + + A +K ++ + + +
Sbjct: 160 GLKDAQDDADGDKPPEPAPEKQVEDKPDAEIIERAEKTPTPTEKPDT 206
>gi|322516522|ref|ZP_08069440.1| cell wall-associated serine proteinase PrtA [Streptococcus
vestibularis ATCC 49124]
gi|322124991|gb|EFX96405.1| cell wall-associated serine proteinase PrtA [Streptococcus
vestibularis ATCC 49124]
Length = 2163
Score = 38.7 bits (88), Expect = 0.93, Method: Composition-based stats.
Identities = 16/181 (8%), Positives = 53/181 (29%), Gaps = 1/181 (0%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
++ +S+ +L Y V L S + L + + + ++ K+ E +
Sbjct: 1 MKKSTVLSLTT-AAVILAAYVPNEVILADTPSSEDSLKISDKETVIGNQNENKEKLEDIH 59
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
+S++ + ++ E + S + + + +
Sbjct: 60 NVIETSKDTEEKKTTIIEEKEVVSKNPVIDNNTSNEEAKIKEENSNQSQGDKADLSASKD 119
Query: 123 YDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIV 182
+ + + + EK + ++ K + ++D + +
Sbjct: 120 PESPQKEDKLVYIAEFKDKESGEKAIKELSNLKNTKVLYTYDRIFNGSAIETTKDTLDKI 179
Query: 183 R 183
+
Sbjct: 180 K 180
>gi|126642628|ref|YP_001085612.1| tolerance to group A colicins single-stranded filamentous DNA phage
[Acinetobacter baumannii ATCC 17978]
Length = 368
Score = 38.7 bits (88), Expect = 0.93, Method: Composition-based stats.
Identities = 23/208 (11%), Positives = 60/208 (28%), Gaps = 8/208 (3%)
Query: 47 EDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKG 106
+ ++ + + Q+ + + + A + K + +K
Sbjct: 152 DAKRKAEADAKAKQQAADNAKRKAEADAKAKQQKAAEDAKRKAEADAKAKQQKAAEDAKR 211
Query: 107 EQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVE 166
+ A + ++ + A K+Q + + + KK +
Sbjct: 212 KAEADAKAKQQKAAEDAKRKAEADAKAKQQKAAEDARRKAEIEAEEKAASAKKAQEEAAQ 271
Query: 167 KSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVG 226
K + + A ++ W++P+ V + F L+ G V + G
Sbjct: 272 KKGEAKKIASSAKRDFEQKIRRAWDVPTGSSGK---TVSVRFTLSDSGSVSSIVITRSSG 328
Query: 227 GTELVRRMLRENARKAVIKSQAFRLSPS 254
L + + A+ S + +
Sbjct: 329 DD-----ALDASIKAAIQASAPYPMPSD 351
>gi|118594610|ref|ZP_01551957.1| TonB, C-terminal [Methylophilales bacterium HTCC2181]
gi|118440388|gb|EAV47015.1| TonB, C-terminal [Methylophilales bacterium HTCC2181]
Length = 254
Score = 38.7 bits (88), Expect = 0.94, Method: Composition-based stats.
Identities = 24/252 (9%), Positives = 67/252 (26%), Gaps = 29/252 (11%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
++N + S+++H+ + +Y + +E++ + I +P
Sbjct: 14 IKNAIIASLLVHLTLITDIYI---INFDKVEKEQELVEFEAILLSKNIPEPPPPSPDPEP 70
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
+ + + E E + +
Sbjct: 71 IPEPEPIPEPEPIPEPEPIPEPEPIPEPEPIPEPEPIPELPVEDTVPI-----------E 119
Query: 123 YDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIV 182
+K + ++Q + +T L++ + S +
Sbjct: 120 EEKPIAPEPIKQKQTPVPPAPEPVLVPETGEDDSRNAGLIALDDFSRELALHIAKYKEYP 179
Query: 183 RNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKA 242
R W + V + +L +G ++ K G ++L +
Sbjct: 180 RIAARRGW----------QGEVVLEVKLTGRGKLIKKRVRRSSG-----FKVLDNEGMEM 224
Query: 243 VIKSQAFRLSPS 254
+ ++ F P+
Sbjct: 225 IDRAAPFPQPPN 236
>gi|195442109|ref|XP_002068802.1| GK17973 [Drosophila willistoni]
gi|194164887|gb|EDW79788.1| GK17973 [Drosophila willistoni]
Length = 866
Score = 38.7 bits (88), Expect = 0.94, Method: Composition-based stats.
Identities = 12/140 (8%), Positives = 40/140 (28%)
Query: 36 REMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATE 95
+ V+ + K V + + + + + K
Sbjct: 679 PLLTEVELDLKKKKLEQSKSKYVAKVFEKPVKKAKKQQQAEKNDKKPQQAEKNDKKPQQA 738
Query: 96 NETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVR 155
+ + ++A K+ + N ++ +Q + ++ ++
Sbjct: 739 EKNNKKPPQADKKAKKQLTEQEKKPINGETTSQKTQLNGQKKVQKKAQETTQTNGIEKLQ 798
Query: 156 PDKKELLSKVEKSSRKRIPS 175
+++ +KV K+ K+
Sbjct: 799 KQQQKPPAKVNKNEGKQSQK 818
>gi|167820468|ref|ZP_02452148.1| hypothetical protein Bpse9_35417 [Burkholderia pseudomallei 91]
Length = 456
Score = 38.7 bits (88), Expect = 0.94, Method: Composition-based stats.
Identities = 21/171 (12%), Positives = 54/171 (31%), Gaps = 5/171 (2%)
Query: 83 DRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGIS 142
+R + E R+ S+ ++ A L + D+ ++ ++
Sbjct: 113 EREPSLRWRGDEQTEENRAERSEHVPDVRADAFLDRCLKIRDRAVAAEPAGRDDARDRGQ 172
Query: 143 FAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRV---IANWNIPSDFKRF 199
+ + R E+ ++ + +++ + + W + + R
Sbjct: 173 HPGGEDRERFEERAAGPEIRAREAARVTTEPVAGSEQQRMQDGIGDHVRAWAVRAGRMRE 232
Query: 200 KKLRVKMHFQLNQKGFVLGKINVDVVGGTEL-VRRMLRENARKAVIK-SQA 248
+ + L G ++ D G R++ ENAR+ V +
Sbjct: 233 ARRAAAVDGALTMDGSRSTAVHGDAGGPPRSRTHRIIAENARRRVRAGCRP 283
>gi|310767029|gb|ADP11979.1| Protein tolA [Erwinia sp. Ejp617]
Length = 401
Score = 38.7 bits (88), Expect = 0.95, Method: Composition-based stats.
Identities = 17/125 (13%), Positives = 35/125 (28%), Gaps = 15/125 (12%)
Query: 147 KSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKM 206
K+ + +K+ + V+ + + + D F +
Sbjct: 289 KNAPKSGKAGGAAAGQGQQKKAGASGAAIDSYLGQVKGAIQSKF---YDADTFAGKTCDV 345
Query: 207 HFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPSTYKSW---RNIT 263
+L G ++ G + + AR A PS + W + T
Sbjct: 346 RIKLGPDGLLISA---TAASGDAALCQAAINAARMA-----KIPKPPSQ-EVWQVIKEAT 396
Query: 264 LFFVP 268
+ F P
Sbjct: 397 IEFKP 401
>gi|262041780|ref|ZP_06014966.1| siderophore-mediated iron transport protein TonB [Klebsiella
pneumoniae subsp. rhinoscleromatis ATCC 13884]
gi|259040851|gb|EEW41936.1| siderophore-mediated iron transport protein TonB [Klebsiella
pneumoniae subsp. rhinoscleromatis ATCC 13884]
Length = 248
Score = 38.7 bits (88), Expect = 0.97, Method: Composition-based stats.
Identities = 27/234 (11%), Positives = 62/234 (26%), Gaps = 29/234 (12%)
Query: 8 AISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGS 67
+S+ +H + L + Q++ S + + + + D + V
Sbjct: 17 LLSVAIHGAVVAGLLYTSVHQVIEQPSPTQPIEITMVAPADLEPPPAAQPVVEPVVEPEP 76
Query: 68 SQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQK 127
E V +E + + K K EQ +E P +
Sbjct: 77 EPEPEVVPEPPKEAPVVIHKPEPKPKPKPKPKPKPEKKVEQPKREVKPAAEPRPASPFEN 136
Query: 128 ISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVI 187
+ A + + A+ R + S ++ RI
Sbjct: 137 NNTAPARTAPSTSTAAAKPTVTAPSGPRAISRVQPSYPARAQALRI-------------- 182
Query: 188 ANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARK 241
+ V++ F ++ G + + R + ++A +
Sbjct: 183 -------------EGTVRVKFDVSPDGRIDNLQILSAQPANMFEREV--KSAMR 221
>gi|213026504|ref|ZP_03340951.1| cell envelope integrity inner membrane protein TolA [Salmonella
enterica subsp. enterica serovar Typhi str. 404ty]
Length = 121
Score = 38.7 bits (88), Expect = 0.97, Method: Composition-based stats.
Identities = 18/114 (15%), Positives = 35/114 (30%), Gaps = 14/114 (12%)
Query: 155 RPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKG 214
+P K S + S ++ + + D ++ + +H L G
Sbjct: 18 QPSKDSGTSGANGGTTGADISA-YAKQIQVAIQ---SRLYDASLYQGKQCVLHISLAPDG 73
Query: 215 FVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPST--YKSWRNITLFF 266
+ +E L + A A K+ PS Y+ ++ L F
Sbjct: 74 SLKSIT-------SEGGDPALCQAALMA-TKTAKIPKPPSQAVYEKIKDAKLDF 119
>gi|224069651|ref|XP_002192036.1| PREDICTED: hypothetical protein [Taeniopygia guttata]
Length = 1434
Score = 38.7 bits (88), Expect = 0.98, Method: Composition-based stats.
Identities = 17/190 (8%), Positives = 38/190 (20%), Gaps = 21/190 (11%)
Query: 14 HVMFLLLLYFNFNVQLLVPISRREMLSVDNIY-------NEDYHSSKYKKIEEPVVQFKG 66
HV+ + F ++ P+ + + + + V
Sbjct: 604 HVISVGDAIFLWDFLAPPPVKSSPARACSPVSTLVLRSDSSSETPKDVSETPRQTVPLPL 663
Query: 67 SSQEN--------------LVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKE 112
S + + +E D K + E
Sbjct: 664 LSSPPCLDISSVHPAGFQSISSESDREEEADVPDSSRKVANEHKDASVIVVESEENEEPV 723
Query: 113 SALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKR 172
S +K + K + + K +L + S
Sbjct: 724 VRPKVRQESSRSPEKPANEPRKASKTPKSQCSIRPDSYRHFTPRFKASVLPQSFSSPPAG 783
Query: 173 IPSQDAIAIV 182
A++
Sbjct: 784 SEVLKLKAVI 793
>gi|126273449|ref|XP_001378624.1| PREDICTED: similar to KIAA0185 [Monodelphis domestica]
Length = 1773
Score = 38.7 bits (88), Expect = 0.98, Method: Composition-based stats.
Identities = 24/226 (10%), Positives = 61/226 (26%), Gaps = 30/226 (13%)
Query: 42 DNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKT---------- 91
+ + + S ++ + V +E + V++ +
Sbjct: 1384 EIVSKKKKQSHPLEEDDSGVEVNYKEEKEKRFKQSKVRKKKQTKPTEVPRLQLSSGFAWD 1443
Query: 92 ------HATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAE 145
+ SS S+ E+A + + +KQ+ K ++ + +
Sbjct: 1444 VSLDTLAPAMPPREDSSDSEDEEASQATLKKSKKGKELEKQEAEKELSRIEAALMDPNWK 1503
Query: 146 KKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVK 205
++ D S + I R S + +KL V
Sbjct: 1504 PETADDFDRLVLSSPNSSILWLQYMAFHLHATEIEKARAVAERALKSISFREEQEKLNVW 1563
Query: 206 MHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRL 251
+ ++ G E + ++ +AV + ++
Sbjct: 1564 VAL----------MNLENMYGSKETLTKVF----ERAVQYCEPLKV 1595
>gi|22125244|ref|NP_668667.1| autotransporter [Yersinia pestis KIM 10]
gi|108811414|ref|YP_647181.1| hypothetical protein YPN_1251 [Yersinia pestis Nepal516]
gi|229901670|ref|ZP_04516792.1| extracellular functions; secreted protein [Yersinia pestis
Nepal516]
gi|21958113|gb|AAM84918.1|AE013736_14 putative autotransporter [Yersinia pestis KIM 10]
gi|108775062|gb|ABG17581.1| hypothetical protein YPN_1251 [Yersinia pestis Nepal516]
gi|229681599|gb|EEO77693.1| extracellular functions; secreted protein [Yersinia pestis
Nepal516]
gi|320016027|gb|ADV99598.1| putative autotransporter protein [Yersinia pestis biovar Medievalis
str. Harbin 35]
Length = 998
Score = 38.7 bits (88), Expect = 0.98, Method: Composition-based stats.
Identities = 27/243 (11%), Positives = 75/243 (30%), Gaps = 14/243 (5%)
Query: 4 ENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIY----NEDYHSSKYKKIEE 59
L +S+++ + + P + + V + + K
Sbjct: 9 TRLLPLSILI-SALIPAAVLAAPSVAIPPPVQDLINQVQSYANAHVISPEQAETLIKRLT 67
Query: 60 PVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMP 119
+ + + ++ + E + ++ + + + + + +Q K +A
Sbjct: 68 VTPEKLKEEEARVKQELAAVEKKQKEANTEIITTSIEKDQFNKALNNKQKAKLAAETVFI 127
Query: 120 VSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAI 179
+ + + KA NK L + + K S+ + L K++ + I Q+ +
Sbjct: 128 NANSKQNEAIKAVNKNWSLADENISTKLSVIVNGESKTQAILAEKIKLTETANINQQEQV 187
Query: 180 AIVRN---RVIANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRML 235
+ + N + D K + + +L Q + ++ + L
Sbjct: 188 IKAQQLDTEIQKNQSELDDAINNKTTGTIVLQEKLTQ-----AETKLETAKNNPKSKLSL 242
Query: 236 REN 238
E
Sbjct: 243 AEA 245
>gi|300870665|ref|YP_003785536.1| hypothetical protein BP951000_1044 [Brachyspira pilosicoli 95/1000]
gi|300688364|gb|ADK31035.1| hypothetical protein BP951000_1044 [Brachyspira pilosicoli 95/1000]
Length = 305
Score = 38.3 bits (87), Expect = 0.99, Method: Composition-based stats.
Identities = 31/267 (11%), Positives = 78/267 (29%), Gaps = 24/267 (8%)
Query: 6 GLAISMILHVMFLLLL-------YFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIE 58
+ +S ILH+ L L+ F +N +L + + D ++ + + ++
Sbjct: 21 AVIVSFILHIFVLSLVNTYIMESLFAYNDKLEKLLEEEKNKKDDYMFLVETPDVEEEENN 80
Query: 59 EPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRM 118
E S + R + FSD + + + + +
Sbjct: 81 EDTPFASDKS--LVSRGQIDVKPSKVFSDASVFSFLGDGANSPIVERRDNINPNNNNNLQ 138
Query: 119 PVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQD- 177
+ + + K + D+ +LS S + +Q+
Sbjct: 139 KQKDLGNDISREDVVPYKPKNPGLKGDTKIPASFEDGADRAVVLSSETGSIQLGTKAQEY 198
Query: 178 --AIAIVRNRVIANWNIP-------SDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGT 228
+ + +W + R ++ V + L G ++ + +
Sbjct: 199 FWYFYTLVGSIRDSWYLTIPNQAHFLGLLRSDEVEVLISIDL--DGNIIFEKFLSNSKLG 256
Query: 229 ELVRRMLRENARKAVIKSQAFRLSPST 255
+ L + KA+ ++ + P
Sbjct: 257 QS---SLDNSCSKAIEYAKKLKPPPQG 280
>gi|242243089|ref|ZP_04797534.1| conserved hypothetical protein [Staphylococcus epidermidis W23144]
gi|242233437|gb|EES35749.1| conserved hypothetical protein [Staphylococcus epidermidis W23144]
Length = 1393
Score = 38.3 bits (87), Expect = 0.99, Method: Composition-based stats.
Identities = 18/193 (9%), Positives = 50/193 (25%), Gaps = 4/193 (2%)
Query: 53 KYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKE 112
K K + + L V + + + K + + +K E + K
Sbjct: 1040 KKVKSSLKEIDDLKVEIKKLKAKDEVSKATKKAENAMKKYKEVKADIKKLKAKDEASEKA 1099
Query: 113 SALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKR 172
+ + + K + ++ ++ K +++ + + + L +S K
Sbjct: 1100 FKAKIKVLEYNNAKAEKKILKGKDEITALTKKVKSALNQINDLKMEVKELKARGNASTKA 1159
Query: 173 IPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVR 232
++ + + + G
Sbjct: 1160 DEAKGKLDNF----NNTKTPTKNLLATGNASPFTDTAQGKLNLFNGTGIPTKNLSANGNA 1215
Query: 233 RMLRENARKAVIK 245
++AR AV +
Sbjct: 1216 SSFTDSARNAVQR 1228
>gi|253701558|ref|YP_003022747.1| hypothetical protein GM21_2960 [Geobacter sp. M21]
gi|251776408|gb|ACT18989.1| conserved hypothetical protein [Geobacter sp. M21]
Length = 245
Score = 38.3 bits (87), Expect = 0.99, Method: Composition-based stats.
Identities = 30/252 (11%), Positives = 62/252 (24%), Gaps = 49/252 (19%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
GLA+S+ LH+ ++L + R + VD
Sbjct: 24 GLAVSLALHLFCAVILI---GLPGGGEPPRPPVTYVDL---------------------- 58
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
D A K + P
Sbjct: 59 -----------------DSIPTPQPAAAAIQPAASEPELPEPDPAKAEPIPVPETPPAPP 101
Query: 126 QKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNR 185
+++++ Q L ++ T K + R + V
Sbjct: 102 KQVAEQQPAAQPLPPQPAPAEERSATTFGMGLTKGYFKSLSDGDSLRPDVKAYYLEVLQG 161
Query: 186 VIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIK 245
V W + K K + ++ + + G ++G + G + +K +
Sbjct: 162 VNNKWWLEQ--KDQKVRTIVVNISVARNGEIVGSFILQSSGN-----IVYDRMVQKTLES 214
Query: 246 SQAFRLSPSTYK 257
S P+++
Sbjct: 215 SGPLPPLPASFH 226
>gi|238785868|ref|ZP_04629836.1| hypothetical protein yberc0001_38240 [Yersinia bercovieri ATCC
43970]
gi|238713238|gb|EEQ05282.1| hypothetical protein yberc0001_38240 [Yersinia bercovieri ATCC
43970]
Length = 366
Score = 38.3 bits (87), Expect = 0.99, Method: Composition-based stats.
Identities = 15/107 (14%), Positives = 34/107 (31%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPV 61
+L + +S++LH++ + LL + Q V + D + + +
Sbjct: 10 KLNRAIIVSVVLHIVLIALLIWGSLTQTTEMGGGGAGGEVIDAVMVDPGAVTEQYNRQQQ 69
Query: 62 VQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQ 108
Q E + + Q+ + Q E ++ E
Sbjct: 70 QQTDAKRAEQQRQKKAEQQAEELQQKQATEQQRLKELEKERLQAQED 116
>gi|198476637|ref|XP_002132415.1| GA25201 [Drosophila pseudoobscura pseudoobscura]
gi|198137788|gb|EDY69817.1| GA25201 [Drosophila pseudoobscura pseudoobscura]
Length = 1236
Score = 38.3 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 18/186 (9%), Positives = 49/186 (26%), Gaps = 5/186 (2%)
Query: 33 ISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQEN-----GDRFSD 87
I E + I + + + SQE + + + ++
Sbjct: 549 IEVPESEELKIIEDSQEKPITDETSPGTEIIEVKESQEEIPTEQEENKETADTSQEKTKP 608
Query: 88 QTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKK 147
+ + + + + + + + E PV + K ++++
Sbjct: 609 DLDSILNDLKKETEAVKEIKLVVDEPETKPKPVLSSILDDLQKEIAAVKNIKLEQVKLNN 668
Query: 148 SIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMH 207
S V D+ K ++ + I D+ + R+ N +
Sbjct: 669 STIIEVSSDDEAVSKVKGNANTEEVIELCDSDDNQKQRISPNKTPSKNKSIKDFFDTSYV 728
Query: 208 FQLNQK 213
+
Sbjct: 729 VKRTPD 734
>gi|15835501|ref|NP_297260.1| hypothetical protein TC0887 [Chlamydia muridarum Nigg]
gi|270285684|ref|ZP_06195078.1| hypothetical protein CmurN_04578 [Chlamydia muridarum Nigg]
gi|270289692|ref|ZP_06195994.1| hypothetical protein CmurW_04633 [Chlamydia muridarum Weiss]
gi|301337079|ref|ZP_07225281.1| hypothetical protein CmurM_04575 [Chlamydia muridarum MopnTet14]
gi|7190915|gb|AAF39682.1| conserved hypothetical protein [Chlamydia muridarum Nigg]
Length = 240
Score = 38.3 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 15/220 (6%), Positives = 49/220 (22%), Gaps = 29/220 (13%)
Query: 10 SMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQ 69
S+ +H++ +L+F+ + + + V
Sbjct: 13 SVAVHIVLGGILFFSSAQKPKPKLHPFKERIVHLPPEPKMTCPTQTPSA----------- 61
Query: 70 ENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKIS 129
+ T N+ ++ + + P + +
Sbjct: 62 --PSSHQTSTPLPPPKKVNNIPPPTSNKPSKTPLTHFQSRSPHPPTKPTPSREKQQATLK 119
Query: 130 KATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIAN 189
K L + +++ I + +
Sbjct: 120 KLAQLAHQLAEEAASQETHIAQLSWPTQVQVSTDTESCQQEAF----------------C 163
Query: 190 WNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTE 229
V++ + +++G +L + + T+
Sbjct: 164 ALFQQYVCLPFPGEVRIKLEFSKEGRLLICSILSAISPTD 203
>gi|224438538|ref|ZP_03659458.1| hypothetical protein HcinC1_11111 [Helicobacter cinaedi CCUG 18818]
gi|313144964|ref|ZP_07807157.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818]
gi|313129995|gb|EFR47612.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818]
Length = 230
Score = 38.3 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 15/169 (8%), Positives = 52/169 (30%), Gaps = 8/169 (4%)
Query: 85 FSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFA 144
D+ + ++ ++ G + + + + EQ+ +
Sbjct: 56 IDDKPTPAPNKQDSSTNNPLTGSGIKDMFSKIDSDIPSQNSPIGDDREKLEQNTKDKLKE 115
Query: 145 EKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRV 204
+ S + + + L+ +S+ + A + ++ W + +K++
Sbjct: 116 LQSSAQELQNKLNSLSNLTISTDTSQNDGEYDEWYAQIEKIMLRQWQKTFSIE--EKMQA 173
Query: 205 KMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSP 253
++ ++ G V G ++ + + + + R P
Sbjct: 174 LVYIRIANNGDF-SYNIVKYSGNV-----AFDDSLKVMLEECKQMRFPP 216
>gi|298246475|ref|ZP_06970281.1| FHA domain containing protein [Ktedonobacter racemifer DSM 44963]
gi|297553956|gb|EFH87821.1| FHA domain containing protein [Ktedonobacter racemifer DSM 44963]
Length = 695
Score = 38.3 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 11/78 (14%), Positives = 18/78 (23%)
Query: 15 VMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVR 74
L L FN N L +L + + P Q + +V
Sbjct: 405 AFCLFLPDFNLNDWLDNQDVPPPLLGAKLAEKARADAPEKDTNPVPQPQPGAPPRPAIVS 464
Query: 75 DFSVQENGDRFSDQTKTH 92
+ + K
Sbjct: 465 PLPTTDKKPALKPEDKPQ 482
>gi|327265228|ref|XP_003217410.1| PREDICTED: SH3 and PX domain-containing protein 2B-like [Anolis
carolinensis]
Length = 906
Score = 38.3 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 18/165 (10%), Positives = 43/165 (26%), Gaps = 3/165 (1%)
Query: 28 QLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK---GSSQENLVRDFSVQENGDR 84
P + ++ + I + + KK E + K ++ L V +
Sbjct: 537 LEQRPPPKPPVMGLPVIPPKQSIPPRDKKPELKTEKGKLFQLKNEMGLECGHKVSPKEVK 596
Query: 85 FSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFA 144
+ + ++ L+ K + T+ Q +
Sbjct: 597 KPNLRPIVKPTKPKVEPPEDNKSEPATQNVFLKSKPQIRPKPLPAPRTDSPQADDKVDIC 656
Query: 145 EKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIAN 189
+S +K + S + VR++ +N
Sbjct: 657 NLRSKLRPAKTQEKPYDQESISSESAFNNNVLPIESSVRSQERSN 701
>gi|195591499|ref|XP_002085478.1| GD14800 [Drosophila simulans]
gi|194197487|gb|EDX11063.1| GD14800 [Drosophila simulans]
Length = 752
Score = 38.3 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 17/183 (9%), Positives = 38/183 (20%), Gaps = 21/183 (11%)
Query: 42 DNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRS 101
D I + K+ + Q + D ++ + +
Sbjct: 337 DLIPQDKAAWKKFPPKVLQLAQKPDLVEPEPSLDNIPEKETPFIENNPEKPVILEVKDIK 396
Query: 102 SSSKGEQALKE---------------------SALLRMPVSPYDKQKISKATNKEQDLQG 140
+ + P S + ++ +Q LQ
Sbjct: 397 PLVPKPEDEADIQGWLQQCSETISQQLQLVINEDSSSKPASAEPEGIDFESEISKQQLQP 456
Query: 141 ISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFK 200
E + + + + R+ + WN K +
Sbjct: 457 RILGESNKKLSPESGWQNSFTVRLDDFEYIVDHNMTEFRDPQAKRIRSKWNQRFGLKSAE 516
Query: 201 KLR 203
LR
Sbjct: 517 NLR 519
>gi|239814796|ref|YP_002943706.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Variovorax paradoxus
S110]
gi|239801373|gb|ACS18440.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Variovorax paradoxus
S110]
Length = 636
Score = 38.3 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 19/190 (10%), Positives = 53/190 (27%), Gaps = 5/190 (2%)
Query: 55 KKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESA 114
K P + ++ EN VR + + ++ + +++ + ++A
Sbjct: 369 KPAVVPPFEQVRATIENEVRSQQATQEFAKAAETFTDAVYQQPDSLKPAAEKLRLTIQTA 428
Query: 115 LLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIP 174
P + N L ++K + + +V + +
Sbjct: 429 SNVSRTPPPGAAGVLANRNFLNALFAADSLDRKQNTEAIEVGSNQLAAGRVTQYTPAHPM 488
Query: 175 SQDAI-AIVRNR-VIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVR 232
+ +R + + + + + KL + G G +
Sbjct: 489 PLAEVKDKIRAQLITERAAVMAKAEGEAKLAA---WTAKADGATFGAPVTVSRREAQAQP 545
Query: 233 RMLRENARKA 242
+ + A +A
Sbjct: 546 LAVIDAALRA 555
>gi|160890804|ref|ZP_02071807.1| hypothetical protein BACUNI_03249 [Bacteroides uniformis ATCC 8492]
gi|270295802|ref|ZP_06202002.1| conserved hypothetical protein [Bacteroides sp. D20]
gi|317479759|ref|ZP_07938881.1| TonB family domain-containing protein [Bacteroides sp. 4_1_36]
gi|156859803|gb|EDO53234.1| hypothetical protein BACUNI_03249 [Bacteroides uniformis ATCC 8492]
gi|270273206|gb|EFA19068.1| conserved hypothetical protein [Bacteroides sp. D20]
gi|316904129|gb|EFV25961.1| TonB family domain-containing protein [Bacteroides sp. 4_1_36]
Length = 272
Score = 38.3 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 28/233 (12%), Positives = 62/233 (26%), Gaps = 9/233 (3%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
G+A ++++HV + LL S + V D + V
Sbjct: 12 GMAGALVVHVAIIALLILV--GFTPPEPSEEGGVPVMLGEVPD--ALGAADPSLVKVDVM 67
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
V++ Q+ + +++T + E K+ K + + K
Sbjct: 68 PEETAPQVQETVEQDIITQETEETVAIKPKAEPKKKEEVKKPEKTEAEKAEEARKLAAAK 127
Query: 126 QKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNR 185
+ + +E + ++ A K + E + + +
Sbjct: 128 AERERKEAEEAARKRVAGAFGKGAQMGSKGDTEGEGIQGSPTGNAPSGATSGTGGYGSFN 187
Query: 186 VIANWNIPSDFKRF-----KKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRR 233
+ R + RV + +N G V+ R
Sbjct: 188 LGGRSLGEGGLPRPVYNVQDEGRVVVTITVNPAGHVIATSINRQTNTVNPALR 240
>gi|194745195|ref|XP_001955074.1| GF18589 [Drosophila ananassae]
gi|190628111|gb|EDV43635.1| GF18589 [Drosophila ananassae]
Length = 1019
Score = 38.3 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 15/159 (9%), Positives = 51/159 (32%), Gaps = 8/159 (5%)
Query: 31 VPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTK 90
P S+ E+ + + +E+ + + ++ + N + SD
Sbjct: 175 PPPSKPEINDAEEVSDEELPAPQRAELPADAEVIS-------EDELPTHNNNNNSSDPKA 227
Query: 91 THATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSID 150
+ + + + S ++ + E+ + Y+ + +N Q L+ + +
Sbjct: 228 PLKRKADKEAENESDDKKVVSEANSKDKSLEQYNPSSPTSESNDAQPLEKRAKVDDSEAK 287
Query: 151 TVVVRPDKKELLSKVEKSSRKRIPSQ-DAIAIVRNRVIA 188
++ + +K +++ + + V
Sbjct: 288 EKKNEKERDKEKAKDTDKDKEKERKKLPDLDKYWRAVKE 326
>gi|308506477|ref|XP_003115421.1| hypothetical protein CRE_18481 [Caenorhabditis remanei]
gi|308255956|gb|EFO99908.1| hypothetical protein CRE_18481 [Caenorhabditis remanei]
Length = 2264
Score = 38.3 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 12/138 (8%), Positives = 35/138 (25%), Gaps = 4/138 (2%)
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
+ + + + + +DQ A R + + +
Sbjct: 1976 KLAKEKADKEAKAAQEKAQQEAKADQLIRLAQAQRNARIDEQVKKAKELAERQIMEKAAR 2035
Query: 123 YDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIV 182
+ KE+ + + + KE + + SS + +A
Sbjct: 2036 DAQTAKQAKLAKEKAENALLEKAARDAHAAQLAKKAKEQVDQAAWSSTIAQMTPSQMA-- 2093
Query: 183 RNRVIANWNIPSDFKRFK 200
++ W+ + +
Sbjct: 2094 --QIAQVWSAMAGGLGSQ 2109
>gi|332304943|ref|YP_004432794.1| hypothetical protein Glaag_0563 [Glaciecola agarilytica
4H-3-7+YE-5]
gi|332172272|gb|AEE21526.1| hypothetical protein Glaag_0563 [Glaciecola agarilytica
4H-3-7+YE-5]
Length = 320
Score = 38.3 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 16/181 (8%), Positives = 42/181 (23%), Gaps = 1/181 (0%)
Query: 7 LAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKG 66
+ S++LH+ L L+ + S+ + + I E
Sbjct: 37 ILASVLLHLGILFLVAQTPHEIPNFDTSKDGEVKIKPITARLIFPPIEAPAEVESTPVDS 96
Query: 67 SSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQ 126
+ + E D T + + + +
Sbjct: 97 LEPMDSPEPINSPEPIDSLEPINSPAITAPAPVSEPKATAQLEEPPAVEQTPDPVVAPEP 156
Query: 127 KISKATNK-EQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNR 185
+ + + K + ++ D +K + Q V+ +
Sbjct: 157 EPEAVAETVPEPPKTEVAQPKTESEASFMQQDPLAPPESSKKPTLAEGQEQTVADKVKGQ 216
Query: 186 V 186
+
Sbjct: 217 L 217
>gi|209886215|ref|YP_002290072.1| TonB protein [Oligotropha carboxidovorans OM5]
gi|209874411|gb|ACI94207.1| TonB protein [Oligotropha carboxidovorans OM5]
Length = 71
Score = 38.3 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 11/70 (15%), Positives = 27/70 (38%), Gaps = 6/70 (8%)
Query: 202 LRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPSTYKSWRN 261
+ + F++++ + + G + + A V ++Q F P +
Sbjct: 1 MTTIVKFKIDRDA-LSYAKVLKSSG-----FDIADKAAIINVQRAQPFPPPPRNFDDSFR 54
Query: 262 ITLFFVPSKM 271
+ + F PS+M
Sbjct: 55 VPIVFRPSRM 64
>gi|167743289|ref|ZP_02416063.1| hypothetical protein Bpse14_34762 [Burkholderia pseudomallei 14]
gi|167850300|ref|ZP_02475808.1| hypothetical protein BpseB_33985 [Burkholderia pseudomallei B7210]
Length = 456
Score = 38.3 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 21/171 (12%), Positives = 54/171 (31%), Gaps = 5/171 (2%)
Query: 83 DRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGIS 142
+R + E R+ S+ ++ A L + D+ ++ ++
Sbjct: 113 EREPSLRWRGDEQTEENRAERSEHVPDVRADAFLDRCLKIRDRAVAAEPAGRDDARDRGQ 172
Query: 143 FAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRV---IANWNIPSDFKRF 199
+ + R E+ ++ + +++ + + W + + R
Sbjct: 173 HPGGEDRERFEERAAGPEIRAREAARVTTEPVAGSEQQRMQDGIGDHVRAWAVRAGRMRE 232
Query: 200 KKLRVKMHFQLNQKGFVLGKINVDVVGGTEL-VRRMLRENARKAVIK-SQA 248
+ + L G ++ D G R++ ENAR+ V +
Sbjct: 233 ARRAAAVDGALTMDGSRSTAVHGDAGGPPRSRTHRIIAENARRRVRAGCRP 283
>gi|149209363|ref|XP_001522056.1| hypothetical protein MGCH7_ch7g173 [Magnaporthe oryzae 70-15]
gi|86196128|gb|EAQ70766.1| hypothetical protein MGCH7_ch7g173 [Magnaporthe oryzae 70-15]
Length = 556
Score = 38.3 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 16/166 (9%), Positives = 44/166 (26%), Gaps = 3/166 (1%)
Query: 23 FNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQE-- 80
F+ N L + V+ + ++ P + S + ++
Sbjct: 38 FSLNPSDLASPPGSQEDPVELDALKTESAALRAVESTPTPEETSSPAAASEKKTKKRKSW 97
Query: 81 -NGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQ 139
+T+ + + + + +Q++ + L+
Sbjct: 98 GQVLPEPKTNLPPRKRAKTEDEKEQRRVERVLRNRRAAQSSRERKRQEVEALEQRNAALE 157
Query: 140 GISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNR 185
+K T+ + + V SS K + R++
Sbjct: 158 QQLLHFQKLTQTMYQELQLRRREAGVVTSSEKPDGLTLTPELFRSQ 203
>gi|190892697|ref|YP_001979239.1| hypothetical protein RHECIAT_CH0003113 [Rhizobium etli CIAT 652]
gi|190697976|gb|ACE92061.1| hypothetical conserved protein [Rhizobium etli CIAT 652]
Length = 352
Score = 38.3 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 18/158 (11%), Positives = 43/158 (27%), Gaps = 1/158 (0%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
+ G+ S++LHV + LL F P E + V+ + + + KK EE
Sbjct: 21 IRWGVGASVLLHVPLIALLIFGLPKIEPKP-PEDESVKVELVPPPEEKKPEEKKPEEKKP 79
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
+ + K + + + + + +++ ++
Sbjct: 80 EKPPEPKPPEQAKKQPPPPPPPPPPPAKKASEQAKPPMPTLNPVTAFGDKNSGPDKFLAG 139
Query: 123 YDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKE 160
+ K K + +
Sbjct: 140 NSSEGERKPAKTSPQHTSGQVPPKSVAEEPKPEAPPSK 177
>gi|315587230|gb|ADU41611.1| siderophore-mediated iron transport protein TonB [Helicobacter
pylori 35A]
Length = 283
Score = 38.3 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 30/257 (11%), Positives = 71/257 (27%), Gaps = 15/257 (5%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
IS L+ + YF + P+++ V +S K E +
Sbjct: 18 SFLISFALYA--IGFGYFLLREEAPTPLAQAGTTKVTMSLASINTNSNTKTNAESAKPKE 75
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
++ + +E S + + K + + + ++ ++
Sbjct: 76 EPKEKPKKEEPKKEEPKKEVSKPNPKPKPKPKPKPKPKPEPKPKPEPKPEPKVEEVKKEE 135
Query: 126 QKISKATNKEQDLQGISFAEKK-------SIDTVVVRPDKKELLSKVEKSSRKRIPSQDA 178
K + ++ A K+ +K + E + S +
Sbjct: 136 PKEEPKKEEAKEEAKEKSAPKQVTTKDIVKEKDKQEESNKTSEGATSEAQAYNPGVSNEF 195
Query: 179 IAIVRNRVIANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRE 237
+ ++ + + P + + V + F +N G V V +L
Sbjct: 196 LMKIQTAISSKNRYPKMAQIRGIEGEVLVSFVINPDGSVTDIKVVKSNTTD-----ILNH 250
Query: 238 NARKAVIKSQAFRLSPS 254
A A+ + P
Sbjct: 251 AALDAIKNAAHLFPKPE 267
>gi|294506153|ref|YP_003570211.1| protein TonB [Salinibacter ruber M8]
gi|294342481|emb|CBH23259.1| Protein TonB [Salinibacter ruber M8]
Length = 247
Score = 38.3 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 20/93 (21%), Positives = 33/93 (35%), Gaps = 10/93 (10%)
Query: 183 RNRVIANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARK 241
R + P R + RV++ F + + G + D G +L A +
Sbjct: 158 RRALRGKTYYPPSALRAGLEGRVRVKFVVGKDGDIESPTIADGAGA------LLNRAALR 211
Query: 242 AVIK--SQAFRLSPSTYKSWRNITLFFV-PSKM 271
AV + R ++ R T+ F P KM
Sbjct: 212 AVRRLECTPGREQSRPVEAERTKTVVFALPEKM 244
>gi|260061804|ref|YP_003194884.1| hypothetical protein RB2501_09390 [Robiginitalea biformata
HTCC2501]
gi|88785937|gb|EAR17106.1| hypothetical protein RB2501_09390 [Robiginitalea biformata
HTCC2501]
Length = 301
Score = 38.3 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 13/206 (6%), Positives = 51/206 (24%), Gaps = 15/206 (7%)
Query: 40 SVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETK 99
++ + + + + E + S+ + + + + + + +
Sbjct: 59 PLEPVRRQQPEPEEGVEEEVVEEPAEPVSEPEVPEESTQTDAPTEEVLTHENEESVRIRQ 118
Query: 100 RSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKK 159
+ + K + A +KQ +++ +E++ + +
Sbjct: 119 QEEARKKAEEAARKAQEEAERIEREKQAVAERQRREEEAKKRELDAMMGGLNNSDGTAEG 178
Query: 160 ELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKL--------------RVK 205
+ + + + L RV
Sbjct: 179 SEGDDDRAGDKGQPGGDPYATTYYGAPGSGTGTGGYGLSGRSLASRGQVQQECNQSGRVV 238
Query: 206 MHFQLNQKGFVLGK-INVDVVGGTEL 230
+ +++ G V+ V ++
Sbjct: 239 VKITVDRSGKVVDAQPGVRGTTNSDP 264
>gi|254779882|ref|YP_003057988.1| Siderophore-mediated iron transport protein [Helicobacter pylori
B38]
gi|254001794|emb|CAX30025.1| Siderophore-mediated iron transport protein [Helicobacter pylori
B38]
Length = 283
Score = 38.3 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 31/257 (12%), Positives = 72/257 (28%), Gaps = 15/257 (5%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
IS L+ + YF P+++ V +SK K E +
Sbjct: 18 SFLISFALYA--IGFGYFLLREDAPEPLAQAGTTKVTMSLASINTNSKVKTNAESAKPKE 75
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
+E + +E + + + K + + + ++ ++
Sbjct: 76 EPKEEPKKEEPKKEEPKKEVTKPKPKPKPKPKPKPKPKPEPKPKPEPKPEPKVEEVKKEE 135
Query: 126 QKISKATNKEQDLQGISFAEKK-------SIDTVVVRPDKKELLSKVEKSSRKRIPSQDA 178
K + ++ A K+ +K + E + S +
Sbjct: 136 PKEEPKKEEAKEEAKEKSAPKQVTTKDIVKEKDKQEESNKTSDGATSEAQAYNPGVSNEF 195
Query: 179 IAIVRNRVIANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRE 237
+ ++ + + P + + V + F +N G V V +L
Sbjct: 196 LMKIQTAISSKNRYPKMAQIRGIEGEVLVSFVINPDGSVTDIKVVKSNTTD-----ILNH 250
Query: 238 NARKAVIKSQAFRLSPS 254
A +A+ + P
Sbjct: 251 AALEAIKSAAHLFPKPE 267
>gi|290509020|ref|ZP_06548391.1| TonB [Klebsiella sp. 1_1_55]
gi|289778414|gb|EFD86411.1| TonB [Klebsiella sp. 1_1_55]
Length = 257
Score = 38.3 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 24/234 (10%), Positives = 60/234 (25%), Gaps = 29/234 (12%)
Query: 8 AISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGS 67
+S+ +H + L + Q++ S + + + + D + V
Sbjct: 26 LLSVAIHGAVVAGLLYTSVHQVIEQPSPTQPIEITMVAPADLEPPPAAQPVVEPVVEPDP 85
Query: 68 SQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQK 127
E V +E + + K K EQ ++ P +
Sbjct: 86 EPEPEVVPEPPKEAPVVIHKPEPKPKPKPKPKPKPEKKVEQPRRDVKPAAEPRPASPFEN 145
Query: 128 ISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVI 187
+ + + A+ R + + ++ RI
Sbjct: 146 NNTTPARTAPSTSTAAAKPTVTAPSGPRAISRVQPTYPARAQALRI-------------- 191
Query: 188 ANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARK 241
+ V++ F + G + + R + ++A +
Sbjct: 192 -------------EGTVRVKFDVTPDGRIDNLQILSAQPANMFEREV--KSAMR 230
>gi|242220128|ref|XP_002475834.1| predicted protein [Postia placenta Mad-698-R]
gi|220724937|gb|EED78949.1| predicted protein [Postia placenta Mad-698-R]
Length = 1481
Score = 38.3 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 12/123 (9%), Positives = 28/123 (22%), Gaps = 5/123 (4%)
Query: 27 VQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFS 86
VP + V+ K + + + Q + R+ S Q +
Sbjct: 1009 ALPDVPPDAPMDVQVEL-----QPEVKSEVQPDVQPEAPTEVQPQVEREVSPQARPEVPP 1063
Query: 87 DQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEK 146
E + + + L A M + + + + +
Sbjct: 1064 PPQLEVQPEAQPEAQPQLAAQPQLDAPAQPEMQPDVTLQVESQAPVERPEPQPTVVDVPD 1123
Query: 147 KSI 149
Sbjct: 1124 TPA 1126
>gi|153952101|ref|YP_001397546.1| hypothetical protein JJD26997_0332 [Campylobacter jejuni subsp.
doylei 269.97]
gi|152939547|gb|ABS44288.1| conserved hypothetical protein [Campylobacter jejuni subsp. doylei
269.97]
Length = 1221
Score = 38.3 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 12/174 (6%), Positives = 41/174 (23%), Gaps = 12/174 (6%)
Query: 42 DNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQE------------NGDRFSDQT 89
+ N + K + ++ L + E +
Sbjct: 935 TIVSNAPKKQNNIKNKMKNAEVVYNNNARALPTSRASSETKQVSFSNLNSTQAKPKKNLM 994
Query: 90 KTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSI 149
+ + K + + + + + N ++ + +
Sbjct: 995 EELKENIKAKEVEQKNKKSVKQRLDEKIQNDKKASEDILKRYDNFLKESKNNKLDFLDRM 1054
Query: 150 DTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLR 203
+ + + K S + +D + +R ++ NI + +
Sbjct: 1055 SLNTIEYNLSRQMIINAKESTNKGIKKDIPSALRGKIEQELNINPLKEFGENYT 1108
>gi|329113625|ref|ZP_08242404.1| NB Family Protein [Acetobacter pomorum DM001]
gi|326697071|gb|EGE48733.1| NB Family Protein [Acetobacter pomorum DM001]
Length = 163
Score = 38.3 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 17/125 (13%), Positives = 36/125 (28%), Gaps = 6/125 (4%)
Query: 131 ATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANW 190
D + A + + + SS+ + ++
Sbjct: 22 LKKPIPDKTPPAEATTAPPSSEAPPAPAQAAPAPGASSSKASHDPVTWQGALLAQLEKFK 81
Query: 191 NIPSDF-KRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAF 249
PSD ++ + F +++KG VL G +L + A ++Q
Sbjct: 82 RYPSDAMADHQEGVPTVTFSMDRKGHVLTVTLASSSG-----HPLLDQEAIALPKRAQPL 136
Query: 250 RLSPS 254
+ P
Sbjct: 137 PIPPD 141
>gi|183598187|ref|ZP_02959680.1| hypothetical protein PROSTU_01565 [Providencia stuartii ATCC 25827]
gi|188020353|gb|EDU58393.1| hypothetical protein PROSTU_01565 [Providencia stuartii ATCC 25827]
Length = 372
Score = 38.3 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 11/118 (9%), Positives = 35/118 (29%), Gaps = 9/118 (7%)
Query: 154 VRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQK 213
++S ++ + ++ + + + ++ ++ Q+
Sbjct: 262 EGGAASAGQGGGKRSGASNADVENYASKIKAAIQSKFYDSDTYRGR---TCELKLQIAPD 318
Query: 214 GFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPSTYKSWRN--ITLFFVPS 269
G ++ L A +A + R Y++++ T+ F P
Sbjct: 319 GLLVS----ITPKNNASNDPALCSAAIRAANLATLPRPPADVYEAFKKQGSTVVFSPK 372
Score = 36.0 bits (81), Expect = 5.5, Method: Composition-based stats.
Identities = 16/134 (11%), Positives = 42/134 (31%), Gaps = 1/134 (0%)
Query: 2 RLENGLAISMILHVMFLLLLYF-NFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP 60
L L S+ LHV+ + L+ + + + E +D + + + +
Sbjct: 10 NLRLSLLTSLALHVLLIGLIIIGSLVSVVKLGGGGEEGTVIDAVMVDPGAVVQQYNQMQQ 69
Query: 61 VVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPV 120
+ + QE R + + + + S+ E ++ + +
Sbjct: 70 QENSAKQAAKERKEKERKQEAELREKQEQEQKRLQQLEQERIQSEREAQERQKQVEQQQK 129
Query: 121 SPYDKQKISKATNK 134
+ + +K K
Sbjct: 130 QAAEAARKAKEEQK 143
>gi|225174997|ref|ZP_03728994.1| hypothetical protein DealDRAFT_0849 [Dethiobacter alkaliphilus AHT
1]
gi|225169637|gb|EEG78434.1| hypothetical protein DealDRAFT_0849 [Dethiobacter alkaliphilus AHT
1]
Length = 379
Score = 38.3 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 26/175 (14%), Positives = 58/175 (33%), Gaps = 1/175 (0%)
Query: 9 ISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSS 68
IS+I V+ +LL + N Q V+ + + Y ++ +
Sbjct: 6 ISLIA-VILILLHHPVANAQTKQVNPDHNSSVVEIVQQSVDTAVDYLFSQQANIITLTEL 64
Query: 69 QENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKI 128
+EN+V + N + +T + T ++S+ + E + P +
Sbjct: 65 KENVVESENEDINQTKEKQETDSKETSESESQASADEQEDPEEIVDEQSTEAPPEMVEPA 124
Query: 129 SKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVR 183
T + + + +S E +E ++ ++ IA V+
Sbjct: 125 PAPTPADNTAKEETPDNTESTCIHTRNYSYNENGVNIEIRHVEKSHNRIWIATVK 179
>gi|332299079|ref|YP_004441001.1| TonB family protein [Treponema brennaborense DSM 12168]
gi|332182182|gb|AEE17870.1| TonB family protein [Treponema brennaborense DSM 12168]
Length = 286
Score = 38.3 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 18/179 (10%), Positives = 46/179 (25%), Gaps = 9/179 (5%)
Query: 58 EEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLR 117
+ S E V+ + + + + A S
Sbjct: 62 AAELRAEPASKPELSVKPAASKPEPASKPELSAKSAASKPEAASKPELSAVRNFSLQSAA 121
Query: 118 MPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRP-------DKKELLSKVEKSSR 170
D +I + + + +S V + + ++
Sbjct: 122 SGGISDDAPEIVSGSISDDAPEIVSGGGGHEPAAAAVTELLEPGRLEPAHVNGDTPGNAP 181
Query: 171 KRIPSQDAI-AIVRNRVIANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKINVDVVGG 227
++ A+ A++ +++ N P +R + RV + + G + G
Sbjct: 182 GAAATEPAVLALLDRKILDNLTYPERARRRAVEGRVTVRISIGPYGTLDSYRIEAGSGS 240
>gi|33603211|ref|NP_890771.1| proline-rich inner membrane protein [Bordetella bronchiseptica
RB50]
gi|33568842|emb|CAE34600.1| Proline-rich inner membrane protein [Bordetella bronchiseptica
RB50]
Length = 379
Score = 38.3 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 12/89 (13%), Positives = 19/89 (21%), Gaps = 6/89 (6%)
Query: 165 VEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFK-RFKKLRVKMHFQLNQKGFVLGKINVD 223
+++ A VR V P + + QL G V G
Sbjct: 279 ADRNQAGGGRDSGYGAKVRACVQPGVAYPPPPRAGSANPTAQYRVQLGSDGKVNGVTLTS 338
Query: 224 VVGGTELVRRMLRENARKAVIKSQAFRLS 252
G + + F
Sbjct: 339 SSGNPG-----FDRAVETGIRRCNPFPKP 362
>gi|307705275|ref|ZP_07642140.1| prtP [Streptococcus mitis SK597]
gi|307621171|gb|EFO00243.1| prtP [Streptococcus mitis SK597]
Length = 2161
Score = 38.3 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 16/165 (9%), Positives = 39/165 (23%), Gaps = 12/165 (7%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
++ +S+ +L Y E++ D +ED + K+
Sbjct: 1 MKKSTVLSLTT-AAVILAAYV-----------PNEVILADTPSSEDALNISDKETVVGKQ 48
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
E++ ++ + + +K K
Sbjct: 49 NENKEKLEDIHNVIETSKDTEEKKTTVIEEKEVVSKESVIDNKISNEEKIKEDSNQSQED 108
Query: 123 YDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEK 167
SK + + + + + K+ K K
Sbjct: 109 KADSSASKDPESPKKEDKLVYIAEFKDKESGEKAIKELSNLKDTK 153
>gi|152982475|ref|YP_001355165.1| hypothetical protein mma_3475 [Janthinobacterium sp. Marseille]
gi|151282552|gb|ABR90962.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille]
Length = 274
Score = 38.3 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 26/225 (11%), Positives = 54/225 (24%), Gaps = 14/225 (6%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVP-ISRREMLSVDNI-YNEDYHSSKYKKIEE 59
R G+ +S+++H + L V++ S L V I +
Sbjct: 13 RTAIGIGLSLLIHALILFFALDQAKVRVAESGESPTAPLEVSLITQAPAPKPAPKAATPP 72
Query: 60 PVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMP 119
Q K R + T ++SK S +L
Sbjct: 73 APEQKKVEKSNPAPRQQKSASQKKTEPIRQADKGTPPPVAPKTTSKEALPPDMSDMLAAA 132
Query: 120 VSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAI 179
I + + + + + E + + + ++
Sbjct: 133 RERRRAAGIIEPDARPVEDDNAIARANIAEMVQRQSRGRNESGGVFQITFKGVRTAEF-- 190
Query: 180 AIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDV 224
+ W D +R R + G + I +
Sbjct: 191 ------LFRGW----DLRRKTNSRQLIQVDAGPGGDIDTAIVRRM 225
>gi|241205655|ref|YP_002976751.1| hypothetical protein Rleg_2953 [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240859545|gb|ACS57212.1| protein of unknown function DUF930 [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 355
Score = 38.3 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 17/175 (9%), Positives = 44/175 (25%), Gaps = 2/175 (1%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
+ G+ S++ H+ + LL F P+ E + V+ + + + K+
Sbjct: 22 IRWGVVASVVAHIPIIALLIFGLPKIEPKPV-EDETVKVELVPPPEEKKPEPKEKPPEPK 80
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
+ +E + + + + +
Sbjct: 81 PPEEVKKEPPPPPPPPPPPPPPPPPPASKTPEQAKPRPMPTLSPVIEFGDRNSGPEKSLA 140
Query: 123 YDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQD 177
+ + + Q + + T +P +E SK
Sbjct: 141 GNSPQG-ETKPATTPPQHDAEPAQMPTKTAAEKPKTEEPPSKPVPDDVMLPEVAT 194
>gi|330009708|ref|ZP_08306566.1| TonB-dependent receptor [Klebsiella sp. MS 92-3]
gi|328534757|gb|EGF61314.1| TonB-dependent receptor [Klebsiella sp. MS 92-3]
Length = 248
Score = 38.3 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 27/234 (11%), Positives = 62/234 (26%), Gaps = 29/234 (12%)
Query: 8 AISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGS 67
+S+ +H + L + Q++ S + + + + D + V
Sbjct: 17 LLSVAIHGAVVAGLLYTSVHQVIEQPSPTQPIEITMVAPADLEPPPAAQPVVEPVVEPEP 76
Query: 68 SQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQK 127
E V +E + + K K EQ +E P +
Sbjct: 77 EPEPEVAPEPPKEAPVVIHKPEPKPKPKPKPKPKPEKKVEQPKREVKPAAEPRPASPFEN 136
Query: 128 ISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVI 187
+ A + + A+ R + S ++ RI
Sbjct: 137 NNTAPARTAPSTSTAAAKPTVTAPSGPRAISRVQPSYPARAQALRI-------------- 182
Query: 188 ANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARK 241
+ V++ F ++ G + + R + ++A +
Sbjct: 183 -------------EGTVRVKFDVSPDGRIDNLQILSAQPANMFEREV--KSAMR 221
>gi|270014679|gb|EFA11127.1| hypothetical protein TcasGA2_TC004728 [Tribolium castaneum]
Length = 1323
Score = 38.3 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 11/159 (6%), Positives = 37/159 (23%)
Query: 42 DNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRS 101
+ + + + K+ + +E + + + + +
Sbjct: 919 ELVPPQRLNVKAEKEKSPKIETSPPPPPPPPPLPKVEKEKPVKLEKEKVPKLEKEKPPKV 978
Query: 102 SSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKEL 161
+ K + + S +K + + + +
Sbjct: 979 AKEKPKAVKPRRPGRPVDKSNRPPKKCQTPFGLYYASELKNMEPGTDKQAFREKCKAQYK 1038
Query: 162 LSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFK 200
+K ++ + + V A D+K K
Sbjct: 1039 QMSDKKKVVWINLAEQDMTRYQEEVNAYKLKNPDYKPNK 1077
>gi|300867575|ref|ZP_07112225.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506]
gi|300334463|emb|CBN57395.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506]
Length = 262
Score = 38.3 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 22/180 (12%), Positives = 49/180 (27%), Gaps = 9/180 (5%)
Query: 5 NGLAISMILHVM--FLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIE-EPV 61
GL + +IL + +L + N + PI ++ V + + IE E
Sbjct: 71 RGLLLGIILASLVGLVLGTVYYLNRRDEAPIPAPLIVPVPRANQPSTPPAPTRTIEREKT 130
Query: 62 VQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMP-- 119
+ K + N T +S + A + + P
Sbjct: 131 IIEKIVPAPQPSPVQRATPAPQPSPASQQPAPNINITVPNSQRQDPPAPQAAPAPSSPSN 190
Query: 120 ----VSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPS 175
P +++ + A+ + + ++ V S+ +
Sbjct: 191 NINITVPSPQREPASASPIPAPQSSTAPSSNQNDSGSGVGTGSGSNTESGTDSNPSNTAT 250
>gi|291403018|ref|XP_002717847.1| PREDICTED: ubiquitin specific peptidase 8 [Oryctolagus cuniculus]
Length = 1088
Score = 38.3 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 15/155 (9%), Positives = 46/155 (29%)
Query: 31 VPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTK 90
P S++ I ++D + + + D+TK
Sbjct: 351 PPPPVEVDESIELINDQDGRMGPLHISTPGEPVAASKADVSPIIQPVPITKNIPQVDRTK 410
Query: 91 THATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSID 150
A + ++ ++S V + + + + + ++
Sbjct: 411 KPAVKLPEDHRIKNEKTDHEQQSPQSGKVVPDRSTKPVFPPASAMLTDEEKARIHAEAAF 470
Query: 151 TVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNR 185
+ +KEL K ++ ++++ ++ R +
Sbjct: 471 LMEKSKQEKELREKQQEEQKEKLKREEQEQKARKK 505
>gi|238763144|ref|ZP_04624110.1| hypothetical protein ykris0001_40850 [Yersinia kristensenii ATCC
33638]
gi|238698643|gb|EEP91394.1| hypothetical protein ykris0001_40850 [Yersinia kristensenii ATCC
33638]
Length = 252
Score = 38.3 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 26/225 (11%), Positives = 58/225 (25%), Gaps = 24/225 (10%)
Query: 2 RLENGLAISMILHVMFL-LLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP 60
R+ L S+ LH + LLY + + P L+V + + + + + E
Sbjct: 11 RVTWPLVFSVGLHGSVIAALLYVSVEQMNIQPEIEDAPLAVTMVNIDTFAAPQPAAAEPQ 70
Query: 61 VVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPV 120
+ + + K + +K+ + +
Sbjct: 71 AEPEPEPEAIEEAPPEPEVLPEPVPVPLPEPVKPKPKPKPVKKEVKKPDVKKPDVKKTVA 130
Query: 121 SPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIA 180
P DK S + A K ++ V + L + +
Sbjct: 131 PPDDKPFKSDEPALVSTNAPVKSAPKAAVPGVSTSDGPRALSKAKPNYPARALALGIE-- 188
Query: 181 IVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVV 225
+VK+ + ++ G V ++
Sbjct: 189 ---------------------GQVKVQYDIDDDGRVTNVQVLEAT 212
>gi|262278153|ref|ZP_06055938.1| tolerance protein to group A colicins single-stranded filamentous
DNA phage [Acinetobacter calcoaceticus RUH2202]
gi|262258504|gb|EEY77237.1| tolerance protein to group A colicins single-stranded filamentous
DNA phage [Acinetobacter calcoaceticus RUH2202]
Length = 462
Score = 38.3 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 23/208 (11%), Positives = 65/208 (31%), Gaps = 8/208 (3%)
Query: 47 EDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKG 106
+ K ++ + + + + Q+ + + A + K + +K
Sbjct: 246 AKRKAETNAKAKQQKLNEEAKRKADADAKAKQQKANEDAKRKADADAKAKQQKANDDAKR 305
Query: 107 EQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVE 166
+ A + ++ + A K+Q + + ++ +K +
Sbjct: 306 KADADAKAKQQKANEDAKRKADADAKAKQQKAADDAKRKAEAEAEAKAASAQKAQEEAAQ 365
Query: 167 KSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVG 226
K + + + A ++ +W++P+ V + F L+ G V + G
Sbjct: 366 KKAEAKKVASSARRDFEQKIRRSWDVPTGSSGK---TVGVRFTLSDSGSVNSIVITRSSG 422
Query: 227 GTELVRRMLRENARKAVIKSQAFRLSPS 254
L + + A+ S + +
Sbjct: 423 DD-----ALDASIKAAIQASAPYPMPSD 445
>gi|87118914|ref|ZP_01074813.1| TonB-dependent receptor, putative [Marinomonas sp. MED121]
gi|86166548|gb|EAQ67814.1| TonB-dependent receptor, putative [Marinomonas sp. MED121]
Length = 340
Score = 38.3 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 17/127 (13%), Positives = 39/127 (30%), Gaps = 9/127 (7%)
Query: 130 KATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVE---KSSRKRIPSQDAIAIVRNRV 186
K+ Q + + + +S R ++V+ ++
Sbjct: 199 KSEVSTSQTQNPLLDTSPDGNASLTQSKMTTGISSNSFAAGGGRGAKGDVSYGSLVKAKI 258
Query: 187 IANWNIP-SDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIK 245
+ P + KR + V + ++ KG ++ + G + L KAV +
Sbjct: 259 ASKKVYPRASKKRNETGLVLVQVTISHKGDLVEVKILKSSG-----LKRLDRATLKAVKR 313
Query: 246 SQAFRLS 252
+ F
Sbjct: 314 AAPFPAP 320
>gi|257464147|ref|ZP_05628528.1| TonB family protein [Fusobacterium sp. D12]
gi|317061661|ref|ZP_07926146.1| predicted protein [Fusobacterium sp. D12]
gi|313687337|gb|EFS24172.1| predicted protein [Fusobacterium sp. D12]
Length = 250
Score = 38.3 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 27/244 (11%), Positives = 61/244 (25%), Gaps = 29/244 (11%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPV 61
R G +++I H + +LL+F ++L + + S + +
Sbjct: 7 RFFQGFIVAIIFHFLIAILLHF---FDSPSNQYSPKILEITLEQSGGGKKSGSGEKGANL 63
Query: 62 VQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVS 121
++ S + K K E+ K+ +
Sbjct: 64 SGSANIEKKQSFPSQS---------------DDIIKEKIVEKKKEEKDFKKQKKQLIEQK 108
Query: 122 PYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAI 181
+ + K + Q + ++E + +
Sbjct: 109 NSNSAEEGKEDDMGQGKGEGQDFGNGKNNGSGQGNGEREGEGNNRGKGSGGAVTPPYLVS 168
Query: 182 VRNRVIANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENAR 240
+ P + + + V + + G V + G + L E A
Sbjct: 169 YSSP-----KYPPSVRNLEIEGSVYVKILVATDGGVKNVTLHESSGN-----KTLDEVAV 218
Query: 241 KAVI 244
K V
Sbjct: 219 KEVY 222
>gi|255574576|ref|XP_002528199.1| Heat shock 70 kDa protein, putative [Ricinus communis]
gi|223532411|gb|EEF34206.1| Heat shock 70 kDa protein, putative [Ricinus communis]
Length = 849
Score = 38.3 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 16/170 (9%), Positives = 49/170 (28%), Gaps = 2/170 (1%)
Query: 38 MLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENE 97
++SVD+ + + +EP + + D + + + + E
Sbjct: 491 IVSVDSATLLEEEEVEVPVSKEPSKEAAKMETDETSTDAAPPNSSEADVNMQDAKTAEAS 550
Query: 98 TKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPD 157
+ + + K+K+ K +L + + +
Sbjct: 551 GAENGVPESGDKPAQMETDTK--VEAPKKKVKKTNIPVAELVYGGMSPADVQKALEKEFE 608
Query: 158 KKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMH 207
+E++ K+ + + +RN++ + + K+
Sbjct: 609 MALQDRVMEETKDKKNAVEAYVYDMRNKLSDKFQEFVTDSEREDFTAKLQ 658
>gi|195384605|ref|XP_002051005.1| GJ22457 [Drosophila virilis]
gi|194145802|gb|EDW62198.1| GJ22457 [Drosophila virilis]
Length = 427
Score = 38.3 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 16/153 (10%), Positives = 44/153 (28%)
Query: 29 LLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQ 88
L + ++ +D I + + Q + + +
Sbjct: 68 LQPAAAVAQVDKLDGIQAATKTRRTIAYTPNDTKEAERRRQPVNKPETVPEAVAAAKPVE 127
Query: 89 TKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKS 148
R S+ + ++R P + ++ + K N E L S +S
Sbjct: 128 AVATKAAPIQSRRISNSERREQIPERVIRKPETIAEEPTVPKKRNNENTLMVNSLIILES 187
Query: 149 IDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAI 181
+ + + ++ + + K+ Q ++
Sbjct: 188 DEEEDEQLAQAARNAEDQYTHNKQAAQQLKLSA 220
>gi|170054216|ref|XP_001863024.1| mannosyl-oligosaccharide 1,2-alpha-mannosidase IB [Culex
quinquefasciatus]
gi|167874544|gb|EDS37927.1| mannosyl-oligosaccharide 1,2-alpha-mannosidase IB [Culex
quinquefasciatus]
Length = 776
Score = 38.3 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 22/174 (12%), Positives = 42/174 (24%), Gaps = 3/174 (1%)
Query: 28 QLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSD 87
L P E +SV ED + + + + + + Q +
Sbjct: 522 PELKPPQEMENISVVEAQIEDSIPAAVLEELGAKLAEARQALAKKRLEEAFQRAQESLKA 581
Query: 88 QTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKK 147
Q T T S + S + P ++ K T +D S
Sbjct: 582 QQNESPTNLSTSDDSL---IVPIAPSPTTKPPTDDPERMTTVKLTPSARDPDDKSATAAL 638
Query: 148 SIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKK 201
++ E ++ QD + N + +
Sbjct: 639 KLNESTPPDVTTGEREVPEATTVDEDDEQDEGNPAKKFFSENSSRAGAVADGES 692
>gi|240851050|ref|YP_002972450.1| autotransporter [Bartonella grahamii as4aup]
gi|240268173|gb|ACS51761.1| autotransporter [Bartonella grahamii as4aup]
Length = 1212
Score = 38.0 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 17/151 (11%), Positives = 30/151 (19%)
Query: 27 VQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFS 86
++PI VD + + P ++ S
Sbjct: 605 SSTILPIPPSPSAPVDPTPSSSVPITPTPAPSAPSDPSDPVPTDSSSSSSVPITPTPALS 664
Query: 87 DQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEK 146
+ + SSSS + P P S ++ S
Sbjct: 665 EPSDPSDPVPADSSSSSSVPITPTPAPSAPSDPSDPVPADSSSSSSVPITPTPAPSAPSD 724
Query: 147 KSIDTVVVRPDKKELLSKVEKSSRKRIPSQD 177
S T + + D
Sbjct: 725 PSDPTPADSSSSSSVPITPTPAPSAPSDPSD 755
>gi|242763971|ref|XP_002340680.1| protein kinase, putative [Talaromyces stipitatus ATCC 10500]
gi|218723876|gb|EED23293.1| protein kinase, putative [Talaromyces stipitatus ATCC 10500]
Length = 886
Score = 38.0 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 17/167 (10%), Positives = 40/167 (23%)
Query: 46 NEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSK 105
P + S +L + G SD + H +
Sbjct: 667 VSPPTPGTPVPDSHPRRTERPKSTADLPSMAADANAGTSQSDHHRHHHRHGSQHTQFAKS 726
Query: 106 GEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKV 165
+ + + S+ + + ++ V+ +P +E SK
Sbjct: 727 EPVTRDDPPATSSAKTSPTHTQQSQPRASQDASSTQPPSNSQATSDVIEKPKSRETTSKE 786
Query: 166 EKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQ 212
S + + W + R + + ++N
Sbjct: 787 APPLPASSSSNSNTGQRQEVIKGPWRLLRILPRESRYIIGRMLKVNP 833
>gi|114569201|ref|YP_755881.1| ATPase [Maricaulis maris MCS10]
gi|114339663|gb|ABI64943.1| ATPase AAA-2 domain protein [Maricaulis maris MCS10]
Length = 868
Score = 38.0 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 20/230 (8%), Positives = 62/230 (26%), Gaps = 15/230 (6%)
Query: 16 MFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRD 75
+ + + + + +D K E + + Q + +
Sbjct: 370 AIVSAANLSNRYITDRFLPDKAIDLMDEASARLRMQIDSKPEELDEIDR-RAIQLKIEAE 428
Query: 76 FSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKE 135
+E D ++ T + E S S++ + + + ++
Sbjct: 429 ALKKEKDDASKERLATISKEIAELESRSAELTATWRAEKDKLASATTLKEAIDRARSDLA 488
Query: 136 QDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWN---I 192
+ I + + +L + + ++++ W +
Sbjct: 489 DAERRGDLGRASEIKYGQLPDLETKLAAAEADGDDGAAKQEVVDDEQIAQIVSRWTGVPV 548
Query: 193 PSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKA 242
+ + ++M L G V+G+ + + + R+A
Sbjct: 549 DKMLEGERDKLLRMEDALR--GRVIGQ---------DPALEAVSDAVRRA 587
>gi|330959843|gb|EGH60103.1| putative transmembrane protein [Pseudomonas syringae pv. maculicola
str. ES4326]
Length = 246
Score = 38.0 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 17/144 (11%), Positives = 52/144 (36%), Gaps = 7/144 (4%)
Query: 99 KRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDK 158
+ SS + + + + L + S + + ++ + Q + A + V + +
Sbjct: 77 QASSDAAEVKISQAAILQKQLASEKNIASLQQSIEQSQSYRTAKAALDAEQEAAVAKVEA 136
Query: 159 KELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLG 218
+ ++ + ++ ++ ++ R+ + W P + V++ Q G +
Sbjct: 137 AKADAQKQVEEAEKKGVENFDKMLVARLQSRWMRPESA--TSPVSVEVLVQFAPDGTITN 194
Query: 219 KINVDVVGGTELVRRMLRENARKA 242
+ G + L ++ KA
Sbjct: 195 ALVPSSSGSKD-----LDDSVIKA 213
>gi|262382954|ref|ZP_06076091.1| TPR domain-containing protein [Bacteroides sp. 2_1_33B]
gi|262295832|gb|EEY83763.1| TPR domain-containing protein [Bacteroides sp. 2_1_33B]
Length = 1181
Score = 38.0 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 20/162 (12%), Positives = 45/162 (27%), Gaps = 16/162 (9%)
Query: 34 SRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQE--------------NLVRDFSVQ 79
+ E+ VD + E QE + F Q
Sbjct: 1009 DKPEIQPVD--TLRKDTVPVVQPAVEDQGMTLKEIQEIRKREAAEEEARKEEARKAFEAQ 1066
Query: 80 ENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQ 139
+ D+ + K E K+ + + ++ + + + +++ L+
Sbjct: 1067 QKADKELREQKAKEQEELLKKQAEEERALLKAKADREKQLEADRKAKLKQAEADRKAKLK 1126
Query: 140 GISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAI 181
K+ R +KE K ++ K+ + A
Sbjct: 1127 AREDLRKEKERAYKQRLKQKEKERKEKERLYKQKLKEKEKAR 1168
>gi|217032095|ref|ZP_03437595.1| hypothetical protein HPB128_16g55 [Helicobacter pylori B128]
gi|216946243|gb|EEC24851.1| hypothetical protein HPB128_16g55 [Helicobacter pylori B128]
Length = 283
Score = 38.0 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 31/257 (12%), Positives = 71/257 (27%), Gaps = 15/257 (5%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
IS L+ + YF P+++ V +SK K E +
Sbjct: 18 SFLISFALYA--IGFGYFLLREDAPEPLAQAGTTKVTMSLASINTNSKVKTNAESAKPKE 75
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
++ +E + + + K K + + ++ ++
Sbjct: 76 EPKEKPKKEKPKKEEPKKEVTKPKPKPKPKPKPKPKPEPKPKPKPEPKPEPKVEEPKKEE 135
Query: 126 QKISKATNKEQDLQGISFAEKK-------SIDTVVVRPDKKELLSKVEKSSRKRIPSQDA 178
K + ++ A K+ +K + E + S +
Sbjct: 136 PKEEPKKEEAKEEAKEKSAPKQVTTKDIVKEKDKQEESNKTSEGATSEAQAYNPGVSNEF 195
Query: 179 IAIVRNRVIANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRE 237
+ ++ + + P + + V + F +N G V V +L
Sbjct: 196 LMKIQTAISSKNRYPKMAQIRGIEGEVLVSFTINADGSVTDIKVVKSNTTD-----ILNH 250
Query: 238 NARKAVIKSQAFRLSPS 254
A +A+ + P
Sbjct: 251 AALEAIKSAAYLFPKPD 267
>gi|237752067|ref|ZP_04582547.1| conserved hypothetical protein [Helicobacter winghamensis ATCC
BAA-430]
gi|229376634|gb|EEO26725.1| conserved hypothetical protein [Helicobacter winghamensis ATCC
BAA-430]
Length = 221
Score = 38.0 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 18/150 (12%), Positives = 52/150 (34%), Gaps = 6/150 (4%)
Query: 99 KRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDK 158
++ ++ + + + K SK +++QD + +K I +
Sbjct: 55 TQAPQNQTPNPKNSTQEISKEIPKESKNIPSKKHSQKQDPKPTPQHKKSPITPSNSSTQE 114
Query: 159 KELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFK-KLRVKMHFQLNQKGFVL 217
+ ++ + + V+ + +N N P ++ + + V + F + F+
Sbjct: 115 NIIPKNTIETLTFGKDNHPFLRAVKKAIDSNVNYPRQARKMRIQGEVIVEFLWTKHKFLK 174
Query: 218 GKINVDVVGGTELVRRMLRENARKAVIKSQ 247
G + +L +A A+ ++
Sbjct: 175 NLKVYKSSG-----QPILDRSALNAIQQAA 199
>gi|118444840|ref|YP_878715.1| S-layer protein (peptidoglycan anchored) [Clostridium novyi NT]
gi|118135296|gb|ABK62340.1| putative S-layer protein (peptidoglycan anchored) [Clostridium
novyi NT]
Length = 892
Score = 38.0 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 13/139 (9%), Positives = 41/139 (29%)
Query: 41 VDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKR 100
V+ E ++ + + + + E E + + K K
Sbjct: 612 VELEKPEVKEPEIKEEPKVKLEKSEVKEPEVKEHPVVETEKPEIKDPEIKEEPVVKPEKL 671
Query: 101 SSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKE 160
+ + L + V + ++ ++ +++ E+ ++ + E
Sbjct: 672 EIKKLEIKEEPKVELEKPEVKELEVKEDPVVKPEKLEIKKPEIKEEPKVELEKPEVKEPE 731
Query: 161 LLSKVEKSSRKRIPSQDAI 179
+ + + S K + I
Sbjct: 732 IKEEPKVESEKPEVKEPEI 750
Score = 36.8 bits (83), Expect = 3.5, Method: Composition-based stats.
Identities = 14/165 (8%), Positives = 44/165 (26%), Gaps = 11/165 (6%)
Query: 26 NVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKG-----------SSQENLVR 74
P+ + E L + + ++ + +K E ++ K E
Sbjct: 550 PEIKEEPVVKPEKLEIKKLEIKEEPKVELEKPEVKELEVKEDPVVKPEKLEIKKPEIKEE 609
Query: 75 DFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNK 134
E + + K K + + + + ++ +
Sbjct: 610 PKVELEKPEVKEPEIKEEPKVKLEKSEVKEPEVKEHPVVETEKPEIKDPEIKEEPVVKPE 669
Query: 135 EQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAI 179
+ +++ + E+ ++ + E+ K + I
Sbjct: 670 KLEIKKLEIKEEPKVELEKPEVKELEVKEDPVVKPEKLEIKKPEI 714
>gi|86154013|ref|ZP_01072214.1| periplasmic protein [Campylobacter jejuni subsp. jejuni HB93-13]
gi|85842427|gb|EAQ59641.1| periplasmic protein [Campylobacter jejuni subsp. jejuni HB93-13]
Length = 206
Score = 38.0 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 18/210 (8%), Positives = 65/210 (30%), Gaps = 15/210 (7%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
+++ +++ ++L++F + + +I + + ++ + Q
Sbjct: 11 SFLLALAIYISIVILVFF------RLVSEVEPAIQYTDIKDSFVDIELAEPSKQVITQSN 64
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
+ + E + + + K S+ ++ + +KE +
Sbjct: 65 TPKEIQKPTEQIDIEKLFAQTTNKTVKTEDIDQKASNFNELFENIKEIQEEKTTKIQSSA 124
Query: 126 QKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNR 185
+ + + K Q + + + + ++K + + V
Sbjct: 125 KSGASSAPKPQASELVKQLNDSLLQE-------ESSTQGESTKAQKIGIYDEFLGKVVRI 177
Query: 186 VIANWNIPSDFKRFKKLRVKMHFQLNQKGF 215
+ W +K+ VK+ +++ G
Sbjct: 178 ITQRWTQYY--PNSEKISVKVKIFIDENGK 205
>gi|206561546|ref|YP_002232311.1| possible TolA-related transport transmembrane protein [Burkholderia
cenocepacia J2315]
gi|198037588|emb|CAR53526.1| possible TolA-related transport transmembrane protein [Burkholderia
cenocepacia J2315]
Length = 346
Score = 38.0 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 19/135 (14%), Positives = 36/135 (26%), Gaps = 9/135 (6%)
Query: 136 QDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSD 195
+ A+ + + + S S + VR RV N
Sbjct: 221 DRERSARLAQLQGLSGAGEGGGEGLAKSGTGTGSGGNAATPGYADKVRRRVKPN---IVW 277
Query: 196 FKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPST 255
L + + G VL G + + A+ S S
Sbjct: 278 GGERAGLTTVVKIRCTPSGDVLSASVSRSSGNSGW-----DQAVVNAIHASVPLP-PDSN 331
Query: 256 YKSWRNITLFFVPSK 270
++ +IT+ F ++
Sbjct: 332 GRTPSDITITFKAAE 346
>gi|195338745|ref|XP_002035984.1| GM13847 [Drosophila sechellia]
gi|194129864|gb|EDW51907.1| GM13847 [Drosophila sechellia]
Length = 2538
Score = 38.0 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 17/173 (9%), Positives = 41/173 (23%), Gaps = 5/173 (2%)
Query: 31 VPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDR-FSDQT 89
S E V+ E+ + V + + + +T
Sbjct: 1858 EIPSEVEPTPVEVDPVEEPTAMPITPAPPIVDSESRPVEPPVETVLEEPKKVTPSMKGKT 1917
Query: 90 KTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNK----EQDLQGISFAE 145
T ++ +SS S + + P +K + K +
Sbjct: 1918 ANSGTASKGPSTSSKTKTNKTTVSKIPKPTNEPTNKSNSTPLNKKVPLRSKSFSAPMGIS 1977
Query: 146 KKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKR 198
V + ++ + ++ +I +R +N
Sbjct: 1978 SVKRIQEVYLQKQSSSIAASRVPLKSSPVTKKSINDAISRFNSNQADGPSTSG 2030
>gi|50311361|ref|XP_455705.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49644841|emb|CAG98413.1| KLLA0F13882p [Kluyveromyces lactis]
Length = 498
Score = 38.0 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 18/194 (9%), Positives = 54/194 (27%), Gaps = 7/194 (3%)
Query: 41 VDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKR 100
+ I ++ E +EN + + ++ ++ + +
Sbjct: 211 AELIPAKEREQILELLRLEREQIELQKVEENKPK----PKQTKKYKIKSGAGTNLWQEQE 266
Query: 101 SSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKE 160
+ E+ ++ ++ + K + + + + DT R +
Sbjct: 267 KMLQRVEKDREQEREIKRQQILNGESKEEEEDEQLIEARNRLDKLLHFQDTSAERTKIID 326
Query: 161 LLSKVEKSSRKRIPSQDAIAIVRNRVIAN---WNIPSDFKRFKKLRVKMHFQLNQKGFVL 217
S + S A+ + N W + + ++ +V + + + G V+
Sbjct: 327 NASDFAMNEDVMWGSAYERALQLKKQQRNLRKWEKIENERNGRREKVVLDLTIGKDGKVV 386
Query: 218 GKINVDVVGGTELV 231
V
Sbjct: 387 MTEAVRKSSKKTNA 400
>gi|74311263|ref|YP_309682.1| cell envelope integrity inner membrane protein TolA [Shigella
sonnei Ss046]
gi|73854740|gb|AAZ87447.1| membrane spanning protein [Shigella sonnei Ss046]
gi|323163898|gb|EFZ49708.1| protein TolA [Shigella sonnei 53G]
Length = 410
Score = 38.0 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 15/124 (12%), Positives = 46/124 (37%), Gaps = 3/124 (2%)
Query: 2 RLENGLAISMILHVMFLLLLYF-NFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP 60
+L+ + IS +LHV+ L + +F+ + S+D + + + K +
Sbjct: 10 KLKRAIIISAVLHVILFAALLWSSFDENIEASAGGGGGSSIDAVMVDSGAVVEQYKRMQS 69
Query: 61 VVQFKGS--SQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRM 118
Q + + +E ++ + + + + + ++ + +QA + + +
Sbjct: 70 QESSAKRSDEQRKIKEQQAAEELREKQAAEQERLKQLEKERLAAQEQKKQAEEAAKQAEL 129
Query: 119 PVSP 122
Sbjct: 130 KQKQ 133
>gi|317013128|gb|ADU83736.1| siderophore-mediated iron transport protein [Helicobacter pylori
Lithuania75]
Length = 283
Score = 38.0 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 27/257 (10%), Positives = 71/257 (27%), Gaps = 15/257 (5%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
IS L+ + YF P+++ V +S K E +
Sbjct: 18 SFLISFALYA--IGFGYFLLREDAPEPLAQAGTTKVTMSLASINTNSNTKTNAESAKPKE 75
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
++ + + + + + + + + + ++ ++
Sbjct: 76 EPKEKPKEKPKKEEPKKETKPKPKPKPKPKPKPEPKPKPEPKPKPEPKPEPKVEEVKKEE 135
Query: 126 QKISKATNKEQDLQGISFAEKK-------SIDTVVVRPDKKELLSKVEKSSRKRIPSQDA 178
K ++++ A K+ +K + E + S +
Sbjct: 136 PKEEPKKEEDKEEAKEKSAPKQVTTKDIVKEKDKQEESNKTSEGATSEAQAYNPGVSNEF 195
Query: 179 IAIVRNRVIANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRE 237
+ ++ + + P + + V + F +N G V V +L
Sbjct: 196 LMKIQTAISSKNRYPKMAQIRGIEGEVLVSFVINPDGSVTDIKVVKSNTTD-----ILNH 250
Query: 238 NARKAVIKSQAFRLSPS 254
A +A+ + P
Sbjct: 251 AALEAIKSAAHLFPKPE 267
>gi|304437151|ref|ZP_07397112.1| transposase [Selenomonas sp. oral taxon 149 str. 67H29BP]
gi|304369813|gb|EFM23477.1| transposase [Selenomonas sp. oral taxon 149 str. 67H29BP]
Length = 240
Score = 38.0 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 15/139 (10%), Positives = 31/139 (22%), Gaps = 6/139 (4%)
Query: 104 SKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLS 163
+ L + SK ++ Q S +
Sbjct: 82 KTLPPETPQETLKQTSNPQTSAAAPSKPSDGTQTGTAGSGGGDTAGTGTKGGTSGTSGGG 141
Query: 164 KVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVD 223
++ P++ A +R + + + V + + G V V
Sbjct: 142 DAAPAAPPAPPAERVAASLRAEATPEY-PQELIEDDVEGSVTVKILVAADGSVESVKLVT 200
Query: 224 VVGGTELVRRMLRENARKA 242
G + A A
Sbjct: 201 SSG-----YSAMDRAAIAA 214
>gi|172036077|ref|YP_001802578.1| hypothetical protein cce_1162 [Cyanothece sp. ATCC 51142]
gi|171697531|gb|ACB50512.1| conserved hypothetical protein [Cyanothece sp. ATCC 51142]
Length = 312
Score = 38.0 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 16/166 (9%), Positives = 35/166 (21%), Gaps = 1/166 (0%)
Query: 4 ENGLAISMILHVMFLLLLYFNFN-VQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
+S+I H+ FL L + ++ E + + + S P V
Sbjct: 19 RPMFFLSLIFHIGFLRLPLPSSPELKENKTEEIEEKVEITRLIPPSPQPSPATPKTSPKV 78
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
+ + Q + + + + K P
Sbjct: 79 KSTPTPTPIQSPPKVRQPPRQPPRQIPRITTPSPIPQSTPTPKKTPLEINPEPTPSPTPK 138
Query: 123 YDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKS 168
T + + LL ++
Sbjct: 139 QTSTPTPTPTPTPNQELIENDVNNTDNQNEIASEAGSSLLEELRPR 184
>gi|326345731|gb|EGD69470.1| TolA protein [Escherichia coli O157:H7 str. 1125]
Length = 424
Score = 38.0 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 15/124 (12%), Positives = 46/124 (37%), Gaps = 3/124 (2%)
Query: 2 RLENGLAISMILHVMFLLLLYF-NFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP 60
+L+ + IS +LHV+ L + +F+ + S+D + + + K +
Sbjct: 10 KLKRAIIISAVLHVILFAALIWSSFDENIEASAGGGGGSSIDAVMVDSGAVVEQYKRMQS 69
Query: 61 VVQFKGS--SQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRM 118
Q + + +E ++ + + + + + ++ + +QA + + +
Sbjct: 70 QESSAKRSDEQRKMKEQQAAEELREKQAAEQERLKQLEKERLAAQEQKKQAEEAAKQAEL 129
Query: 119 PVSP 122
Sbjct: 130 KQKQ 133
>gi|42784018|ref|NP_981265.1| S-layer-like domain-containing protein [Bacillus cereus ATCC 10987]
gi|42739948|gb|AAS43873.1| S-layer homology domain protein [Bacillus cereus ATCC 10987]
Length = 939
Score = 38.0 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 21/183 (11%), Positives = 59/183 (32%), Gaps = 6/183 (3%)
Query: 9 ISMILHVMFLLLLYFNFNVQLLVPI---SRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
S+I L F L I +R + +V ++ + + + + + K
Sbjct: 4 YSVIAVASLLATNLLTFPSSSLAEIENKTRNSIEAVSHMQSNEKSELQKQLEAAKEREMK 63
Query: 66 GSSQENLVRDFSVQ-ENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYD 124
+E +++ D + + + + Q L E + + +
Sbjct: 64 LEKREEILKQQEELFIKIDDLKQKKEELLEQAGEHNVQIEEVYQELNELKKQQEELEEKN 123
Query: 125 KQKISK--ATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIV 182
++ K +L+ ++K V ++E + + + +K+ + +
Sbjct: 124 PLQVKSNDQEKKTNELKSQEELKEKDGVEVKENNGQEEKVHEEFEEQKKKEELKKQQDEL 183
Query: 183 RNR 185
R +
Sbjct: 184 RKQ 186
>gi|150009734|ref|YP_001304477.1| TPR domain-containing protein [Parabacteroides distasonis ATCC 8503]
gi|255012976|ref|ZP_05285102.1| TPR domain-containing protein [Bacteroides sp. 2_1_7]
gi|149938158|gb|ABR44855.1| TPR domain protein [Parabacteroides distasonis ATCC 8503]
Length = 1186
Score = 38.0 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 20/162 (12%), Positives = 45/162 (27%), Gaps = 16/162 (9%)
Query: 34 SRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQE--------------NLVRDFSVQ 79
+ E+ VD + E QE + F Q
Sbjct: 1009 DKPEIQPVD--TLRKDTVPVVQPAVEDQGMTLKEIQEIRKREAAEEEARKEEARKAFEAQ 1066
Query: 80 ENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQ 139
+ D+ + K E K+ + + ++ + + + +++ L+
Sbjct: 1067 QKADKELREQKAKEQEELLKKQAEEERALLKAKADREKQLEADRKAKLKQAEADRKAKLK 1126
Query: 140 GISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAI 181
K+ R +KE K ++ K+ + A
Sbjct: 1127 AREDLRKEKERAYKQRLKQKEKERKEKERLYKQKLKEKEKAR 1168
>gi|46110288|ref|XP_382202.1| hypothetical protein FG02026.1 [Gibberella zeae PH-1]
gi|84029313|sp|Q4IL82|INO80_GIBZE RecName: Full=Putative DNA helicase INO80
Length = 1904
Score = 38.0 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 23/202 (11%), Positives = 57/202 (28%), Gaps = 13/202 (6%)
Query: 22 YFNFNVQLLVPISRREMLSVDN---IYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSV 78
+ + P +++ + E + K+ Q K S + L D V
Sbjct: 364 ILSSSEPAPKPKEPSPIIAREPEIKEEREPRRDRESKRDSREPKQTKRSLEPELDHDTEV 423
Query: 79 QENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYD------KQKISKAT 132
+++ + + + E E + ++ +R +P + K++
Sbjct: 424 EKDVETEPEPLPSREKEKEPAPKKRGARKSTKGRASDIRDAATPKNGRRLSVKKESPTPR 483
Query: 133 NKEQDLQGISFAEK----KSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIA 188
+ K + + E + + A R RV++
Sbjct: 484 LPAKRQANGQPKPKTWSAEMEKKIQNAESDIENRAANLDADEFDEQQYKERAQKRRRVMS 543
Query: 189 NWNIPSDFKRFKKLRVKMHFQL 210
++ R L + +L
Sbjct: 544 ELDVEYGLSRRDALANTISKKL 565
>gi|298531045|ref|ZP_07018446.1| methyl-accepting chemotaxis sensory transducer [Desulfonatronospira
thiodismutans ASO3-1]
gi|298509068|gb|EFI32973.1| methyl-accepting chemotaxis sensory transducer [Desulfonatronospira
thiodismutans ASO3-1]
Length = 712
Score = 38.0 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 30/250 (12%), Positives = 62/250 (24%), Gaps = 16/250 (6%)
Query: 5 NGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSV-------------DNIYNEDYHS 51
GLAI +IL + L L L + E ++ +
Sbjct: 321 AGLAIGVILALGLGLFLTAVITRPLRKTVDFAEKVAQGSLDEELEVTGKNELGILAGSLR 380
Query: 52 SKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALK 111
+ ++ + + + S E + + + E +
Sbjct: 381 NMVSNLKTKIREAETKSAE--AEEQAQKARQAMQEANQAKEQAEQAKSQGMLQAASSIEG 438
Query: 112 ESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRK 171
+ Q + ++ A + + + SK + S +
Sbjct: 439 VVERMTSASEELSAQVEQASRGADEQSSRAGEAATSMEEMNATVLEVAQNASKAAEGSDQ 498
Query: 172 RIPSQDA-IAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTEL 230
+V V A + + K ++ Q Q G ++ I L
Sbjct: 499 ARSKAQEGSDVVSRSVTAINRVQEQSSQLKSNMSQLGQQAEQIGKIMNVIEDIADQTNLL 558
Query: 231 VRRMLRENAR 240
E AR
Sbjct: 559 ALNAAIEAAR 568
>gi|317144705|ref|XP_001820310.2| hypothetical protein AOR_1_2182154 [Aspergillus oryzae RIB40]
Length = 654
Score = 38.0 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 12/95 (12%), Positives = 28/95 (29%)
Query: 28 QLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSD 87
+ P+ E++ +D E+ + + E + + +
Sbjct: 102 KTAPPVHTPEVVPIDLKNEEEPTEESPADSVPKPRKKYETMVEVRICSKTAAPKPQDIQE 161
Query: 88 QTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
+ + H + E + S + E R V P
Sbjct: 162 EQEQHVDQKEPQEDKRSAESERQGERRARRNKVPP 196
>gi|317182586|dbj|BAJ60370.1| siderophore-mediated iron transport protein [Helicobacter pylori
F57]
Length = 283
Score = 38.0 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 32/257 (12%), Positives = 71/257 (27%), Gaps = 15/257 (5%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
IS L+ + YF + P+++ V +S K E +
Sbjct: 18 SFLISFALYA--IGFGYFLLREEAPAPLAQAGTTKVTMSLASINTNSNTKTNAESAKPKE 75
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
++ + +E S + + K K E + ++ ++
Sbjct: 76 EPKEKPKKEEPKKEEPKKEVSKPKPKPKPKPKPKPEPKPKPEPKPEPKPEPKVEEVKKEE 135
Query: 126 QKISKATNKEQDLQGISFAEKK-------SIDTVVVRPDKKELLSKVEKSSRKRIPSQDA 178
K + ++ A K+ +K + E + S +
Sbjct: 136 PKEEPKKEEAKEEAKEKSAPKQVTTKDIVKEKDKQEESNKTSEGATSEAQAYNPGVSNEF 195
Query: 179 IAIVRNRVIANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRE 237
+ ++ + + P + + V + F +N G V V +L
Sbjct: 196 LMKIQTAISSKNRYPKMAQIRGIEGEVLVSFVINPDGSVTDIKVVKSNTTD-----ILNH 250
Query: 238 NARKAVIKSQAFRLSPS 254
A A+ + P
Sbjct: 251 AALDAIKNAAHLFPKPE 267
>gi|323185100|gb|EFZ70466.1| protein TolA [Escherichia coli 1357]
Length = 394
Score = 38.0 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 15/124 (12%), Positives = 46/124 (37%), Gaps = 3/124 (2%)
Query: 2 RLENGLAISMILHVMFLLLLYF-NFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP 60
+L+ + IS +LHV+ L + +F+ + S+D + + + K +
Sbjct: 10 KLKRAIIISAVLHVILFAALIWSSFDENIEASAGGGGGSSIDAVMVDSGAVVEQYKRMQS 69
Query: 61 VVQFKGS--SQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRM 118
Q + + +E ++ + + + + + ++ + +QA + + +
Sbjct: 70 QESSAKRSDEQRKMKEQQAAEELREKQAAEQERLKQLEKERLAAQEQKKQAEEAAKQAEL 129
Query: 119 PVSP 122
Sbjct: 130 KQKQ 133
>gi|320637997|gb|EFX07766.1| cell envelope integrity inner membrane protein TolA [Escherichia
coli O157:H7 str. G5101]
Length = 420
Score = 38.0 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 15/124 (12%), Positives = 46/124 (37%), Gaps = 3/124 (2%)
Query: 2 RLENGLAISMILHVMFLLLLYF-NFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP 60
+L+ + IS +LHV+ L + +F+ + S+D + + + K +
Sbjct: 10 KLKRAIIISAVLHVILFAALIWSSFDENIEASAGGGGGSSIDAVMVDSGAVVEQYKRMQS 69
Query: 61 VVQFKGS--SQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRM 118
Q + + +E ++ + + + + + ++ + +QA + + +
Sbjct: 70 QESSAKRSDEQRKMKEQQAAEELREKQAAEQERLKQLEKERLAAQEQKKQAEEAAKQAEL 129
Query: 119 PVSP 122
Sbjct: 130 KQKQ 133
>gi|304395718|ref|ZP_07377601.1| protein TolA [Pantoea sp. aB]
gi|304357012|gb|EFM21376.1| protein TolA [Pantoea sp. aB]
Length = 444
Score = 38.0 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 18/130 (13%), Positives = 54/130 (41%), Gaps = 4/130 (3%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISR----REMLSVDNIYNEDYHSSKYKKI 57
+L+ + IS+ILH++ + LL ++ + + P S ++ +V ++
Sbjct: 10 KLKRAIIISVILHIVLIALLIWSSFNEHVDPSSAGGGGSDIDAVMVDPGAVVSQYNRQQN 69
Query: 58 EEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLR 117
++ Q ++ + + + + ++Q + A E E + + E+A +++ +
Sbjct: 70 QQSDSQRAEQQRKKQAQQQAEELQQKQAAEQQRLKALEKERLAAQETAKEEAKQQAEQQK 129
Query: 118 MPVSPYDKQK 127
+ +
Sbjct: 130 AAEDAAKQAQ 139
>gi|212549605|ref|NP_001131088.1| protein tyrosine phosphatase, receptor type, B [Xenopus (Silurana)
tropicalis]
gi|197245776|gb|AAI68627.1| Unknown (protein for MGC:186274) [Xenopus (Silurana) tropicalis]
Length = 2282
Score = 38.0 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 9/154 (5%), Positives = 27/154 (17%), Gaps = 16/154 (10%)
Query: 24 NFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGD 83
N+++ P + + K
Sbjct: 97 NWSLCTEPPTNSPSTI----------------KPPTNRPSTTKPPTNRPSTTKPPTNRPS 140
Query: 84 RFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISF 143
T +T S+ + S + + + + S
Sbjct: 141 TTKPPTNRPSTTKPPTNRPSTTKPSTNRPSTAKSPTNRSSTTKSPTNRPSTTKPPTNRSS 200
Query: 144 AEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQD 177
+ + S ++ ++
Sbjct: 201 TAESPTNRSSTTKSPTNSTSTTMPLTKNPSITKP 234
>gi|168786905|ref|ZP_02811912.1| protein TolA [Escherichia coli O157:H7 str. EC869]
gi|261224450|ref|ZP_05938731.1| membrane anchored protein in TolA-TolQ-TolR complex [Escherichia
coli O157:H7 str. FRIK2000]
gi|189373118|gb|EDU91534.1| protein TolA [Escherichia coli O157:H7 str. EC869]
gi|320193144|gb|EFW67784.1| TolA protein [Escherichia coli O157:H7 str. EC1212]
Length = 404
Score = 38.0 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 15/124 (12%), Positives = 46/124 (37%), Gaps = 3/124 (2%)
Query: 2 RLENGLAISMILHVMFLLLLYF-NFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP 60
+L+ + IS +LHV+ L + +F+ + S+D + + + K +
Sbjct: 10 KLKRAIIISAVLHVILFAALIWSSFDENIEASAGGGGGSSIDAVMVDSGAVVEQYKRMQS 69
Query: 61 VVQFKGS--SQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRM 118
Q + + +E ++ + + + + + ++ + +QA + + +
Sbjct: 70 QESSAKRSDEQRKMKEQQAAEELREKQAAEQERLKQLEKERLAAQEQKKQAEEAAKQAEL 129
Query: 119 PVSP 122
Sbjct: 130 KQKQ 133
>gi|168767191|ref|ZP_02792198.1| protein TolA [Escherichia coli O157:H7 str. EC4486]
gi|168779234|ref|ZP_02804241.1| protein TolA [Escherichia coli O157:H7 str. EC4076]
gi|195939091|ref|ZP_03084473.1| cell envelope integrity inner membrane protein TolA [Escherichia
coli O157:H7 str. EC4024]
gi|208808266|ref|ZP_03250603.1| protein TolA [Escherichia coli O157:H7 str. EC4206]
gi|209400066|ref|YP_002269373.1| protein TolA [Escherichia coli O157:H7 str. EC4115]
gi|254791896|ref|YP_003076733.1| cell envelope integrity inner membrane protein TolA [Escherichia
coli O157:H7 str. TW14359]
gi|189003121|gb|EDU72107.1| protein TolA [Escherichia coli O157:H7 str. EC4076]
gi|189363498|gb|EDU81917.1| protein TolA [Escherichia coli O157:H7 str. EC4486]
gi|208728067|gb|EDZ77668.1| protein TolA [Escherichia coli O157:H7 str. EC4206]
gi|209161466|gb|ACI38899.1| protein TolA [Escherichia coli O157:H7 str. EC4115]
gi|254591296|gb|ACT70657.1| membrane anchored protein in TolA-TolQ-TolR complex [Escherichia
coli O157:H7 str. TW14359]
Length = 424
Score = 38.0 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 15/124 (12%), Positives = 46/124 (37%), Gaps = 3/124 (2%)
Query: 2 RLENGLAISMILHVMFLLLLYF-NFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP 60
+L+ + IS +LHV+ L + +F+ + S+D + + + K +
Sbjct: 10 KLKRAIIISAVLHVILFAALIWSSFDENIEASAGGGGGSSIDAVMVDSGAVVEQYKRMQS 69
Query: 61 VVQFKGS--SQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRM 118
Q + + +E ++ + + + + + ++ + +QA + + +
Sbjct: 70 QESSAKRSDEQRKMKEQQAAEELREKQAAEQERLKQLEKERLAAQEQKKQAEEAAKQAEL 129
Query: 119 PVSP 122
Sbjct: 130 KQKQ 133
>gi|15800455|ref|NP_286467.1| cell envelope integrity inner membrane protein TolA [Escherichia
coli O157:H7 EDL933]
gi|15830028|ref|NP_308801.1| cell envelope integrity inner membrane protein TolA [Escherichia
coli O157:H7 str. Sakai]
gi|217324935|ref|ZP_03441019.1| protein TolA [Escherichia coli O157:H7 str. TW14588]
gi|12513672|gb|AAG55075.1|AE005252_11 membrane spanning protein, required for outer membrane integrity
[Escherichia coli O157:H7 str. EDL933]
gi|13360233|dbj|BAB34197.1| membrane spanning protein TolA [Escherichia coli O157:H7 str.
Sakai]
gi|217321156|gb|EEC29580.1| protein TolA [Escherichia coli O157:H7 str. TW14588]
gi|326341512|gb|EGD65302.1| TolA protein [Escherichia coli O157:H7 str. 1044]
Length = 394
Score = 38.0 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 15/124 (12%), Positives = 46/124 (37%), Gaps = 3/124 (2%)
Query: 2 RLENGLAISMILHVMFLLLLYF-NFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP 60
+L+ + IS +LHV+ L + +F+ + S+D + + + K +
Sbjct: 10 KLKRAIIISAVLHVILFAALIWSSFDENIEASAGGGGGSSIDAVMVDSGAVVEQYKRMQS 69
Query: 61 VVQFKGS--SQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRM 118
Q + + +E ++ + + + + + ++ + +QA + + +
Sbjct: 70 QESSAKRSDEQRKMKEQQAAEELREKQAAEQERLKQLEKERLAAQEQKKQAEEAAKQAEL 129
Query: 119 PVSP 122
Sbjct: 130 KQKQ 133
>gi|333010142|gb|EGK29577.1| protein TolA [Shigella flexneri K-272]
gi|333021094|gb|EGK40351.1| protein TolA [Shigella flexneri K-227]
Length = 413
Score = 38.0 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 15/122 (12%), Positives = 46/122 (37%), Gaps = 3/122 (2%)
Query: 2 RLENGLAISMILHVMFLLLLYF-NFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP 60
+L+ + IS +LHV+ L + +F+ + S+D + + + K +
Sbjct: 10 KLKRAIIISAVLHVILFAALIWSSFDENIEASAGGGGGSSIDAVMVDSGAVVEQYKRMQS 69
Query: 61 VVQFKGS--SQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRM 118
Q + + +E ++ + + + + + ++ + +QA + + +
Sbjct: 70 QESSAKRSDEQRKMKEQQAAEELREKQAAEQERLKQLEKERLAAQEQKKQAEEAAKQAEL 129
Query: 119 PV 120
Sbjct: 130 KQ 131
>gi|326665346|ref|XP_003198016.1| PREDICTED: protein unc-13 homolog A-like, partial [Danio rerio]
Length = 865
Score = 38.0 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 19/163 (11%), Positives = 43/163 (26%), Gaps = 10/163 (6%)
Query: 26 NVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRF 85
+ P M + I +D+ +EEP+V+ L +E
Sbjct: 338 PAEEKPPTVEPPMEEENPIQEDDF------PMEEPLVEEIKMESPPL-SPPYEEEQLMPE 390
Query: 86 SDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAE 145
+ E + E L+ +R + + T K Q +
Sbjct: 391 PESEPVIEEPKEPVDPALRAKENWLRIFEKVRRQLQEVRTSQ---QTQKPQKIHNKELKL 447
Query: 146 KKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIA 188
+ + +L + + + S ++ +
Sbjct: 448 ELMGGALYSIDSMPDLRKRKTIPLVRDLKSHVYKKTLQALIYP 490
Score = 36.4 bits (82), Expect = 4.1, Method: Composition-based stats.
Identities = 13/169 (7%), Positives = 36/169 (21%), Gaps = 8/169 (4%)
Query: 21 LYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQE 80
F P + + + PV S + + +
Sbjct: 266 AVFGLGGSTPTPPPPAP-------TTQSQPQPMTTQSQTPVAPPPAPSTQQMPPVTNKSF 318
Query: 81 NGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKI-SKATNKEQDLQ 139
+ + + + ++ + E
Sbjct: 319 EIPVEDPIITSAPEPKPPTPAEEKPPTVEPPMEEENPIQEDDFPMEEPLVEEIKMESPPL 378
Query: 140 GISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIA 188
+ E++ + P +E V+ + R + VR ++
Sbjct: 379 SPPYEEEQLMPEPESEPVIEEPKEPVDPALRAKENWLRIFEKVRRQLQE 427
>gi|221473056|ref|NP_609020.3| slow as molasses [Drosophila melanogaster]
gi|220901960|gb|AAF52374.3| slow as molasses [Drosophila melanogaster]
Length = 1173
Score = 38.0 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 18/246 (7%), Positives = 64/246 (26%), Gaps = 16/246 (6%)
Query: 14 HVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLV 73
H+ L + + + I+ + + + + EP +
Sbjct: 432 HLETLFYSWLSSENGVQFDITSVSDGQQTIEIATEEGNLLEQPLLEPSTATLEDVSQKSA 491
Query: 74 RDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATN 133
+ ++E + ++ ++ + + + R+ + +
Sbjct: 492 VERLLEEAIAKLELDNESKKETQVEEKKEMDTAQDPIVQVTPRRIKRQAPPVPAPRPSLS 551
Query: 134 KEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIP 193
+ + + K + + + K + P
Sbjct: 552 QVTSSASSCKQSEAEESESGLSTLPKITSDESQPETPKDDLQTGEFD---------FAKP 602
Query: 194 SDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARK---AVIKSQAFR 250
R KK+R + ++ ++ ++ + + L A+K A+
Sbjct: 603 QRPPRKKKMRRTLTWK--KENSIVEATAITSTDSDSDYKPPLSGAAKKKSGAI--CNPLP 658
Query: 251 LSPSTY 256
+ ++
Sbjct: 659 MPEPSF 664
>gi|310822286|ref|YP_003954644.1| TonB domain-containing protein [Stigmatella aurantiaca DW4/3-1]
gi|309395358|gb|ADO72817.1| TonB domain protein [Stigmatella aurantiaca DW4/3-1]
Length = 387
Score = 38.0 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 30/207 (14%), Positives = 50/207 (24%), Gaps = 15/207 (7%)
Query: 58 EEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLR 117
++P+ Q + + QE + + + S G
Sbjct: 156 DQPMSQGQSRPSFEVPNARRKQEIALKTDPEQGPGMSVPNRSESDEVVGNAKRLRVQPGT 215
Query: 118 MPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQD 177
P S D L K I + + +
Sbjct: 216 GP-SDIDGSSGRAGLPGVSSLMPSQAVMDKLIGAAPNDHLRDVDEGDGTFLNTREWKYSS 274
Query: 178 AIAIVRNRVIANWNIPSDFKRF---------KKLRVKMHFQLNQKGFVLGKINVDVVGGT 228
V+ V +WN S R K ++ L+QKG V G
Sbjct: 275 FFNRVKQNVGMHWNPGSQLHRRDPTGAIYSGKDRYTLLNITLDQKGMVRDIQIEKSSG-- 332
Query: 229 ELVRRMLRENARKAVIKSQAFRLSPST 255
L A + ++Q F P+
Sbjct: 333 ---LDFLDLEAISSFQRAQPFPNPPAG 356
>gi|298374133|ref|ZP_06984091.1| TPR domain protein [Bacteroides sp. 3_1_19]
gi|298268501|gb|EFI10156.1| TPR domain protein [Bacteroides sp. 3_1_19]
Length = 1186
Score = 38.0 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 20/162 (12%), Positives = 45/162 (27%), Gaps = 16/162 (9%)
Query: 34 SRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQE--------------NLVRDFSVQ 79
+ E+ VD + E QE + F Q
Sbjct: 1009 DKPEIQPVD--TLRKDTVPVVQPAVEDQGMTLKEIQEIRKREAAEEEARKEEARKAFEAQ 1066
Query: 80 ENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQ 139
+ D+ + K E K+ + + ++ + + + +++ L+
Sbjct: 1067 QKADKELREQKAKEQEELLKKQAEEERALLKAKADREKQLEADRKAKLKQAEADRKAKLK 1126
Query: 140 GISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAI 181
K+ R +KE K ++ K+ + A
Sbjct: 1127 AREDLRKEKERAYKERLKQKEKERKEKERLYKQKLKEKEKAR 1168
>gi|296121424|ref|YP_003629202.1| flagellar P-ring protein [Planctomyces limnophilus DSM 3776]
gi|296013764|gb|ADG67003.1| flagellar P-ring protein [Planctomyces limnophilus DSM 3776]
Length = 715
Score = 38.0 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 13/140 (9%), Positives = 40/140 (28%)
Query: 51 SSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQAL 110
S + + + + + ++ E D + +T + + +++ +S+ A
Sbjct: 566 SLPASRKARVGRENLSPNMFPISPEKAIGEESDPLALKTDAESLKAVSQKPDASEKSLAD 625
Query: 111 KESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSR 170
K + V +K + + + + K +
Sbjct: 626 KNAEPSMASVKTDGSEKKPASRKTPEKSSEKNEPNSGLPSQSEPDDSPRAEKKSSSKPTA 685
Query: 171 KRIPSQDAIAIVRNRVIANW 190
R + D ++ + W
Sbjct: 686 DRSAADDEPDSSSEKIQSRW 705
>gi|118591037|ref|ZP_01548437.1| hypothetical protein SIAM614_20291 [Stappia aggregata IAM 12614]
gi|118436559|gb|EAV43200.1| hypothetical protein SIAM614_20291 [Stappia aggregata IAM 12614]
Length = 432
Score = 38.0 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 16/176 (9%), Positives = 47/176 (26%), Gaps = 2/176 (1%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
GL +S +LH + L+L + P ++++ V+ + +
Sbjct: 25 GLGVSAVLHALVALMLLEGVSGYTTQP--LQDVVEVELLPPPPQEEQTPPVELPQPEPEQ 82
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
+E + Q ++ + ++ +A E ++L+ ++
Sbjct: 83 PEQEEVETPEQPEQPQQEQAEEAPPPPPPPPPADSEDLAETPEAPPEPSVLQEVTEFGEE 142
Query: 126 QKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAI 181
+ + S A + + + +
Sbjct: 143 DTGLQGEEETPPASAESTATEGEEQAAADAQTEDAQAGETDAGEGDGEGEGQQADA 198
>gi|50292945|ref|XP_448905.1| hypothetical protein [Candida glabrata CBS 138]
gi|49528218|emb|CAG61875.1| unnamed protein product [Candida glabrata]
Length = 532
Score = 38.0 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 22/193 (11%), Positives = 53/193 (27%), Gaps = 10/193 (5%)
Query: 42 DNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRS 101
+ I + +E E V EN + S + E K
Sbjct: 223 ELIPINERLEIMDYLNKEKDEIINRKIVEAPVSRKKKPENSYKISTGMGKNMFEEHDKLM 282
Query: 102 SSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSID-------TVVV 154
+ + +Q ++ + + + + ATN++ + + A+ + +
Sbjct: 283 NFIEKQQEREKKRREVLNSNEAENDTPTHATNRDDVDEELQAAQDRLQKLLHYQDTSAER 342
Query: 155 RPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIAN---WNIPSDFKRFKKLRVKMHFQLN 211
+ S A++ + N W + K+ + + +N
Sbjct: 343 TKIIDNASDFSMSNETSIWGSAKERALLLKKQQRNMKKWEQLEKERNGKRDKYVVSMNIN 402
Query: 212 QKGFVLGKINVDV 224
G V +
Sbjct: 403 SDGKVTMSEVLKS 415
>gi|256838586|ref|ZP_05544096.1| TPR domain-containing protein [Parabacteroides sp. D13]
gi|256739505|gb|EEU52829.1| TPR domain-containing protein [Parabacteroides sp. D13]
Length = 1186
Score = 38.0 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 20/162 (12%), Positives = 45/162 (27%), Gaps = 16/162 (9%)
Query: 34 SRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQE--------------NLVRDFSVQ 79
+ E+ VD + E QE + F Q
Sbjct: 1009 DKPEIQPVD--TLRKDTVPVVQPAVEDQGMTLKEIQEIRKREAAEEEARKEEARKAFEAQ 1066
Query: 80 ENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQ 139
+ D+ + K E K+ + + ++ + + + +++ L+
Sbjct: 1067 QKADKELREQKAKEQEELLKKQAEEERALLKAKADREKQLEADRKAKLKQAEADRKAKLK 1126
Query: 140 GISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAI 181
K+ R +KE K ++ K+ + A
Sbjct: 1127 AREDLRKEKERAYKQRLKQKEKERKEKERLYKQKLKEKEKAR 1168
>gi|294507998|ref|YP_003572056.1| conserved hypothetical protein containing TonB, C-terminal domain
[Salinibacter ruber M8]
gi|294344326|emb|CBH25104.1| conserved hypothetical protein containing TonB, C-terminal domain
[Salinibacter ruber M8]
Length = 237
Score = 38.0 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 24/222 (10%), Positives = 61/222 (27%), Gaps = 30/222 (13%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
G A ++ILH LL F F ++ + V+ + + E +
Sbjct: 8 GFATTVILHGGLALL--FAFLTASRPRPAQLGYVEVEFGEFSPGQPVEATEQVEKTTTPE 65
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
+ S + + S+ E + ++ E + E+ +
Sbjct: 66 PQEEAPEPEAESDETAEEPESEPVNLPEEEQSEESVPPTEEETTVPEAEAQP------ET 119
Query: 126 QKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNR 185
++ + ++ S P E L + + + ++ A +R
Sbjct: 120 EQQADQQEPSEEPGEESGDPGSGSQEEAAAPYDIEGLDRDPERAPLPQYAEKVNARIR-- 177
Query: 186 VIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGG 227
+ +N G ++ ++ +
Sbjct: 178 --------------------VRITVNPDGRIVRRVPLLKGNP 199
>gi|159884163|gb|ABX00760.1| LD36405p [Drosophila melanogaster]
Length = 1196
Score = 38.0 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 18/246 (7%), Positives = 64/246 (26%), Gaps = 16/246 (6%)
Query: 14 HVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLV 73
H+ L + + + I+ + + + + EP +
Sbjct: 455 HLETLFYSWLSSENGVQFDITSVSDGQQTIEIATEEGNLLEQPLLEPSTATLEDVSQKSA 514
Query: 74 RDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATN 133
+ ++E + ++ ++ + + + R+ + +
Sbjct: 515 VERLLEEAIAKLELDNESKKETQVEEKKEMDTAQDPIVQVTPRRIKRQAPPVPAPRPSLS 574
Query: 134 KEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIP 193
+ + + K + + + K + P
Sbjct: 575 QVTSSASSCKQSEAEESESGLSTLPKITSDESQPETPKDDLQTGEFD---------FAKP 625
Query: 194 SDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARK---AVIKSQAFR 250
R KK+R + ++ ++ ++ + + L A+K A+
Sbjct: 626 QRPPRKKKMRRTLTWK--KENSIVEATAITSTDSDSDYKPPLSGAAKKKSGAI--CNPLP 681
Query: 251 LSPSTY 256
+ ++
Sbjct: 682 MPEPSF 687
>gi|218515738|ref|ZP_03512578.1| hypothetical protein Retl8_19639 [Rhizobium etli 8C-3]
Length = 320
Score = 38.0 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 18/158 (11%), Positives = 43/158 (27%), Gaps = 1/158 (0%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
+ G+ S++LHV + LL F P E + V+ + + + KK EE
Sbjct: 52 IRWGVGASVLLHVPLIALLIFGLPKIEPKP-PEDESVKVELVPPPEEKKPEEKKPEEKKP 110
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
+ + K + + + + + +++ ++
Sbjct: 111 EKPPEPKPPEQAKKQPPPPPPPPPPPAKKASEQAKPPMPTLNPVTAFGDKNSGPDKFLAG 170
Query: 123 YDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKE 160
+ K K + +
Sbjct: 171 NSSEGERKPAKTSPQHTSGQVPPKSVAEEPKPEAPPSK 208
>gi|320583716|gb|EFW97929.1| hypothetical protein HPODL_0559 [Pichia angusta DL-1]
Length = 599
Score = 38.0 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 16/150 (10%), Positives = 43/150 (28%), Gaps = 9/150 (6%)
Query: 40 SVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETK 99
+ + +ED S+K + + + K + E + + ++ + +
Sbjct: 150 PFEFMISEDKKSTKKAEQKGSEDEAKARALERYINQRIEKAKAEKSKQPDGKTVDQAKK- 208
Query: 100 RSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKK 159
+S SK ++ + P K K ++ + + K
Sbjct: 209 LTSISKPNLKTTQADKMPKTPKPTSLPKPKKQGKNNGKKASLATTLTSVLPEPIKTAKVK 268
Query: 160 ELLSKVEKSSRKRIPSQDAIAIVRNRVIAN 189
V Q +R+++ +
Sbjct: 269 AGNVDVSD--------QGIFDKIRDKIEKH 290
>gi|313681981|ref|YP_004059719.1| tonb family protein [Sulfuricurvum kujiense DSM 16994]
gi|313154841|gb|ADR33519.1| TonB family protein [Sulfuricurvum kujiense DSM 16994]
Length = 224
Score = 38.0 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 13/160 (8%), Positives = 44/160 (27%)
Query: 1 MRLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP 60
M+ + +S ILH F+ + LS+ + + + ++
Sbjct: 1 MKTKRSFLLSAILHAGFITGAIAFTTIPKEKDEEIVLELSLTEPTPSQPQNVEKQIVKPI 60
Query: 61 VVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPV 120
+ + + + + + +T+ E++ +S + +
Sbjct: 61 PKETVQPTSQLPIVEQVKIVEEIKPQPETRELIVESKPIETSQLAQMEPKIIPPVSTHQP 120
Query: 121 SPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKE 160
+ + + + + VR ++
Sbjct: 121 ITPPVNAEEQYLDDHLSTIRDLLVKYRKYPSQAVRLKQEG 160
>gi|152970735|ref|YP_001335844.1| transport protein TonB [Klebsiella pneumoniae subsp. pneumoniae MGH
78578]
gi|150955584|gb|ABR77614.1| energy transducer [Klebsiella pneumoniae subsp. pneumoniae MGH
78578]
Length = 248
Score = 38.0 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 27/234 (11%), Positives = 63/234 (26%), Gaps = 29/234 (12%)
Query: 8 AISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGS 67
+S+ +H + L + Q++ S + + + + D + V
Sbjct: 17 LLSVAIHGAVVAGLLYTSVHQVIEQPSPTQPIEITMVAPADLEPPPAAQPVVEPVVEPEP 76
Query: 68 SQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQK 127
E V +E + + K K EQ +E P +
Sbjct: 77 EPEPEVVPEPPKEAPVVIHKPEPKPKPKPKPKPKPEKKVEQPKREVKPAAEPRPASPFEN 136
Query: 128 ISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVI 187
+ A + + A+ R +RV
Sbjct: 137 NNTAPARTAPSTSTAAAKPTVTAPSGPRA--------------------------ISRVQ 170
Query: 188 ANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARK 241
++ + R + V++ F ++ G + + R + ++A +
Sbjct: 171 PSYPPRAQALRIEG-TVRVKFDVSPDGRIDNLQILSAQPANMFEREV--KSAMR 221
>gi|238485732|ref|XP_002374104.1| conserved hypothetical protein [Aspergillus flavus NRRL3357]
gi|220698983|gb|EED55322.1| conserved hypothetical protein [Aspergillus flavus NRRL3357]
Length = 633
Score = 38.0 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 12/95 (12%), Positives = 28/95 (29%)
Query: 28 QLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSD 87
+ P+ E++ +D E+ + + E + + +
Sbjct: 102 KTAPPVHTPEVVPIDLKNEEEPTEESPADSVPKPRKKYETMVEVRICSKTAAPKPQDIQE 161
Query: 88 QTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
+ + H + E + S + E R V P
Sbjct: 162 EQEQHVDQKEPQEDKRSAESERQGERRARRNKVPP 196
>gi|195343002|ref|XP_002038087.1| GM18624 [Drosophila sechellia]
gi|194132937|gb|EDW54505.1| GM18624 [Drosophila sechellia]
Length = 1196
Score = 38.0 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 19/242 (7%), Positives = 66/242 (27%), Gaps = 21/242 (8%)
Query: 23 FNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSV---- 78
++ + ++ SV + +++ + E + ++ V S
Sbjct: 459 LFYSWLSSENGVQFDITSVSDGQQTIEIATEAGDLLEQPLLEPSTATLEDVSQKSAVERL 518
Query: 79 -QENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQD 137
+E + ++ ++ + E + + R+ + ++
Sbjct: 519 LEEAIAKLELDNESKKERQVKEKKEVNTAEDPIVQVTPRRIKRQAPPVPAPRPSLSQVTS 578
Query: 138 LQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFK 197
+ + K + + + K + P
Sbjct: 579 SASSCKQSEAEESESGLSTLPKITSDESQPETPKDDLQAGEFD---------FAKPQRPP 629
Query: 198 RFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARK---AVIKSQAFRLSPS 254
R KK+R + ++ ++ ++ + + L A+K A+ +
Sbjct: 630 RKKKMRRTLTWK--KENSIVEATAITSTDSDSDYKPPLLGAAKKKSGAI--CNPLPMPEP 685
Query: 255 TY 256
++
Sbjct: 686 SF 687
>gi|156839260|ref|XP_001643323.1| hypothetical protein Kpol_463p15 [Vanderwaltozyma polyspora DSM
70294]
gi|156113928|gb|EDO15465.1| hypothetical protein Kpol_463p15 [Vanderwaltozyma polyspora DSM
70294]
Length = 520
Score = 38.0 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 17/198 (8%), Positives = 52/198 (26%), Gaps = 9/198 (4%)
Query: 42 DNIYNEDYHSS-KYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTK------THAT 94
D I E+ + K E V+ ++ + + +
Sbjct: 223 DLIPVEERIKIIELLKQEREVLINGDKNKPQGSSKDETKSKKKTYKVSSNMGTNLFDEQD 282
Query: 95 ENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVV 154
+ S++ + + + + S + L + + S + +
Sbjct: 283 KLFEFIEKSTEKNRKETQEKEEQQKSQEMKQVVDSDLVQAQDRLNKLLHFQDTSAERTRI 342
Query: 155 RPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKG 214
+ + E + + + R + W + ++ +V ++ + + G
Sbjct: 343 IDNASDFSISEETGLWGNARERALMLKKQQRNLRKWEKLEKERNGRREKVVVNMNIGKDG 402
Query: 215 FV--LGKINVDVVGGTEL 230
V L +
Sbjct: 403 KVTLLETPITENSVPANS 420
>gi|1017427|emb|CAA62189.1| elastic titin [Homo sapiens]
Length = 7962
Score = 38.0 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 3/77 (3%), Positives = 14/77 (18%)
Query: 49 YHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQ 108
+K ++ + V K + + + +
Sbjct: 6692 APPAKVPEVPKKPVPEKKVPVPAPKKVEAPPAKVPEVPKKLIPEEKKPTPVPKKVEAPPP 6751
Query: 109 ALKESALLRMPVSPYDK 125
+ + +
Sbjct: 6752 KVPKKREPVPVPVALPQ 6768
Score = 37.2 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 10/116 (8%), Positives = 22/116 (18%)
Query: 29 LLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQ 88
VP E + V E +K ++ + V + + + +
Sbjct: 6644 PEVPKKPEEKVPVLIPKKEKPPPAKVPEVPKKPVPEEKVPVPVPKKVEAPPAKVPEVPKK 6703
Query: 89 TKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFA 144
+ E +P K +
Sbjct: 6704 PVPEKKVPVPAPKKVEAPPAKVPEVPKKLIPEEKKPTPVPKKVEAPPPKVPKKREP 6759
>gi|308186082|ref|YP_003930213.1| TolA protein [Pantoea vagans C9-1]
gi|308056592|gb|ADO08764.1| TolA protein [Pantoea vagans C9-1]
Length = 441
Score = 38.0 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 18/130 (13%), Positives = 55/130 (42%), Gaps = 4/130 (3%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISR----REMLSVDNIYNEDYHSSKYKKI 57
+L+ + IS+ILH++ + LL ++ + + P S ++ +V ++
Sbjct: 10 KLKRAIIISVILHIVLIALLIWSSFNEHVDPSSAGGGGSDIDAVMVDPGAVVSQYNRQQN 69
Query: 58 EEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLR 117
++ Q ++ + + + + ++Q + A E E + + E+A +++ +
Sbjct: 70 QQSDSQRAEQQRKKQAQQQAEELQQKQAAEQQRLKALEKERLAAQETAKEEAKQQAEQQK 129
Query: 118 MPVSPYDKQK 127
+ + +
Sbjct: 130 AAIDAAKQAQ 139
>gi|283768856|ref|ZP_06341767.1| chaperone protein ClpB [Bulleidia extructa W1219]
gi|283104642|gb|EFC06015.1| chaperone protein ClpB [Bulleidia extructa W1219]
Length = 848
Score = 38.0 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 18/176 (10%), Positives = 52/176 (29%), Gaps = 2/176 (1%)
Query: 16 MFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRD 75
+ + + + + +D E + + +
Sbjct: 367 AIIAAATLSNRYITDRFLPDKAIDLIDEACATIRVEMDSMPAELD--ELSRKIMTLQIEE 424
Query: 76 FSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKE 135
S++E D + + S + + + K+++ K
Sbjct: 425 TSLKEESDPKAKLRLEEIQKEVANLSEQQASLMSQWKEEKAKADEVKSAKEQLEKEKLAL 484
Query: 136 QDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWN 191
Q + EK + P+ ++ + E++S+ + QD + ++++NW
Sbjct: 485 NQAQNEADYEKAAKLKYETIPNLEKKIQDAEENSQNTLIQQDVDEDMVAKIVSNWT 540
>gi|327298515|ref|XP_003233951.1| hypothetical protein TERG_05820 [Trichophyton rubrum CBS 118892]
gi|326464129|gb|EGD89582.1| hypothetical protein TERG_05820 [Trichophyton rubrum CBS 118892]
Length = 671
Score = 38.0 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 23/154 (14%), Positives = 49/154 (31%), Gaps = 1/154 (0%)
Query: 29 LLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQE-NGDRFSD 87
P+ +E V+ + E+ + +E VQ +E V E
Sbjct: 511 TAEPVPVKEEKPVEPVKAEEASPAPASAEDEVEVQSLPVVEETEPEAVKVAEAEEKPVEV 570
Query: 88 QTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKK 147
QT+ E + K +A +E + ++ A K + + ++
Sbjct: 571 QTEAKQEEAKPKEPQLEPKPEAQEEVKTESTTPTEPQSKENEAAEAKPEQPKPEETKPQE 630
Query: 148 SIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAI 181
+ + K + S+ E+ K + +A
Sbjct: 631 PKSKESKKDEPKPVESEPEQIPTKNVEPANAQPA 664
>gi|205356486|ref|ZP_03223250.1| periplasmic protein [Campylobacter jejuni subsp. jejuni CG8421]
gi|205345673|gb|EDZ32312.1| periplasmic protein [Campylobacter jejuni subsp. jejuni CG8421]
Length = 259
Score = 38.0 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 21/223 (9%), Positives = 69/223 (30%), Gaps = 16/223 (7%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
+++ +++ ++L++F + + +I + + ++ + Q
Sbjct: 11 SFLLALAIYISIVILVFF------RLVSEVEPAIQYTDIKDSFVDIELAEPSKQVITQSN 64
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
+ + E + + + K S+ ++ +KE +
Sbjct: 65 TPKEIQKPTEQIDIEKLFAQTTNKTVKTEDIDQKASNFNELFGNIKEIQEEKTTKIQSSA 124
Query: 126 QKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNR 185
+ + + K Q + + + + ++K + + V
Sbjct: 125 KSGASSAAKPQASELVKQLNDSLLQE-------ESSTQGESTKAQKIGIYDEFLGKVVRI 177
Query: 186 VIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGT 228
+ W +K+ VK+ +++ G G +V+ G
Sbjct: 178 ITQRWTQYY--PNSEKISVKVKIFIDENGKF-GYTSVEKSGNP 217
>gi|171688610|ref|XP_001909245.1| hypothetical protein [Podospora anserina S mat+]
gi|170944267|emb|CAP70377.1| unnamed protein product [Podospora anserina S mat+]
Length = 639
Score = 38.0 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 17/168 (10%), Positives = 45/168 (26%), Gaps = 19/168 (11%)
Query: 24 NFNVQLLVPISRREMLSVDNIYNEDYHS----SKYKKIEEPVVQFKGSSQENLVRDFSVQ 79
+ E V+ + + K +E + + + V + V
Sbjct: 5 ALPAPPEPATPKAESGGVEETELDKLTPEGKRALKGKDKEVDPEAEVDPKAETVPEAEVA 64
Query: 80 ENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQ 139
+ + E K + E + + + V P ++ +K + +
Sbjct: 65 PKAEVIPEAETVPEAEVAPKAEVIPEAEVIPEAEVVPKAEVVPK-----AEVVSKAEVVA 119
Query: 140 GISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVI 187
K + + +R + ++ R +R R+
Sbjct: 120 KAEVVPKADVRRIRLR----------DPNTEIRGIRARDPKALRKRIR 157
>gi|241888770|ref|ZP_04776076.1| S-layer protein [Gemella haemolysans ATCC 10379]
gi|241864446|gb|EER68822.1| S-layer protein [Gemella haemolysans ATCC 10379]
Length = 373
Score = 38.0 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 20/159 (12%), Positives = 41/159 (25%), Gaps = 5/159 (3%)
Query: 30 LVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDR-FSDQ 88
PI + + S + + K K + +P + E +++ S +
Sbjct: 61 EEPIRKPPIKSEE----KPLTKPKEKPLVKPAPKPTEKPVEKPLKESSEKPIEKPSVKPA 116
Query: 89 TKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKS 148
K E SS+ P I K+T + +
Sbjct: 117 PKPTEKPVEKPLKESSEKPIEKLSVKPTEKPTEQPPGNPIEKSTTNTSETISKVEIKNDV 176
Query: 149 IDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVI 187
+ + + K K S+ K + +
Sbjct: 177 LVGNLSGREIKVSFKKDSVSAEKLYVESLNDNELNQTIK 215
>gi|283784492|ref|YP_003364357.1| colicin import protein [Citrobacter rodentium ICC168]
gi|282947946|emb|CBG87510.1| colicin import protein [Citrobacter rodentium ICC168]
Length = 414
Score = 38.0 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 16/117 (13%), Positives = 44/117 (37%), Gaps = 1/117 (0%)
Query: 2 RLENGLAISMILHVMFLLLLYF-NFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP 60
+L+ + IS +LHV+ +L + +F+ + S+D + + + + ++
Sbjct: 10 KLKRAIIISAVLHVILFAVLIWSSFDEHIEASAGGGGGSSIDAVMVDPGAVVQQYERQQQ 69
Query: 61 VVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLR 117
++E + Q R + + K +++ +Q E+ +
Sbjct: 70 QQSSAQRAKEQREKLAQQQAEELREKQAAEQERLKQIEKERLAAQEQQKQAEAEAKK 126
>gi|331651747|ref|ZP_08352766.1| protein TolA [Escherichia coli M718]
gi|331050025|gb|EGI22083.1| protein TolA [Escherichia coli M718]
Length = 421
Score = 37.6 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 15/119 (12%), Positives = 45/119 (37%), Gaps = 3/119 (2%)
Query: 2 RLENGLAISMILHVMFLLLLYF-NFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP 60
+L+ + IS +LHV+ L + +F+ + S+D + + + K +
Sbjct: 10 KLKRAIIISAVLHVILFAALIWSSFDENIEASAGGGGGSSIDAVMVDSGAVVEQYKRMQS 69
Query: 61 VVQFKGS--SQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLR 117
Q + + +E ++ + + + + + ++ + +QA + +
Sbjct: 70 QESSAKRSDEQRKMKEQQAAEELREKQATEQERLKQLEKERLAAQEQKKQAEEAAKQAE 128
>gi|302839067|ref|XP_002951091.1| hypothetical protein VOLCADRAFT_104948 [Volvox carteri f.
nagariensis]
gi|300263786|gb|EFJ47985.1| hypothetical protein VOLCADRAFT_104948 [Volvox carteri f.
nagariensis]
Length = 1465
Score = 37.6 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 24/230 (10%), Positives = 61/230 (26%), Gaps = 5/230 (2%)
Query: 29 LLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQ 88
P R+ + + E + + V+ + + V + +
Sbjct: 1138 ESKPEPVRDESKPEPVKAESKPEPVKAESKPEPVKAESKPEPVKVEPKPEPVKAESKPEP 1197
Query: 89 TKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKS 148
K + K S + + + +++ P + SK + + +
Sbjct: 1198 VKAESKPEPVKAESKPEPVRDESKPEPVKVEPKPEPVKAESKP-EPVKAESKPEPVKVEP 1256
Query: 149 IDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVK-MH 207
V K E + K + S+ V + + + + +
Sbjct: 1257 KPEPVKAESKPEPVKAESKPEPVKAESKPEPVKVEPKPEPVKAESKPEPVKAESKPEPVK 1316
Query: 208 FQLNQK---GFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPS 254
+L + + V V + + A +AVI + +
Sbjct: 1317 AELKPEPVKAEPVKAEPVKVEIAVDAGAPAAKSAAAEAVIPTAPVTVPAD 1366
>gi|170076560|ref|YP_001733199.1| TonB family protein [Synechococcus sp. PCC 7002]
gi|169887422|gb|ACB01130.1| TonB family C-terminal domain protein [Synechococcus sp. PCC 7002]
Length = 509
Score = 37.6 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 19/171 (11%), Positives = 48/171 (28%), Gaps = 1/171 (0%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRR-EMLSVDNIYNEDYHSSKYKKIEEPVVQF 64
GL S++LH LL L + V+ + E + + E+ ++ E
Sbjct: 23 GLTGSVVLHAGALLGLRWLPPVETVSTEQPPLEFIVTETPPVEEPEVTEETPPEPLDTLP 82
Query: 65 KGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYD 124
++ ++ +V + T T A + + + + S +
Sbjct: 83 TSAATPSVPAPSAVTNSPVPIPQPTVTAAAPTVRPQEAPPEPQVQETTSEPEPQESASEP 142
Query: 125 KQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPS 175
+ ++S+ + + + + R
Sbjct: 143 ESQVSENAPAPLSPENSNPLRGQLQAAASGAERNATTKPGSTATGANRSKP 193
>gi|309786418|ref|ZP_07681044.1| protein TolA [Shigella dysenteriae 1617]
gi|308925812|gb|EFP71293.1| protein TolA [Shigella dysenteriae 1617]
Length = 376
Score = 37.6 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 15/119 (12%), Positives = 45/119 (37%), Gaps = 3/119 (2%)
Query: 2 RLENGLAISMILHVMFLLLLYF-NFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP 60
+L+ + IS +LHV+ L + +F+ + S+D + + + K +
Sbjct: 10 KLKRAIIISAVLHVILFAALIWSSFDENIEASAGGGGGSSIDAVMVDSGAVVEQYKRMQS 69
Query: 61 VVQFKGS--SQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLR 117
Q + + +E ++ + + + + + ++ + +QA + +
Sbjct: 70 QESSAKRSDEQRKMKEQQAAEELREKQAAEQERLKQLEKERLAAQEQKKQAEEAAKQAE 128
>gi|82776017|ref|YP_402364.1| cell envelope integrity inner membrane protein TolA [Shigella
dysenteriae Sd197]
gi|81240165|gb|ABB60875.1| membrane spanning protein [Shigella dysenteriae Sd197]
Length = 421
Score = 37.6 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 15/119 (12%), Positives = 45/119 (37%), Gaps = 3/119 (2%)
Query: 2 RLENGLAISMILHVMFLLLLYF-NFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP 60
+L+ + IS +LHV+ L + +F+ + S+D + + + K +
Sbjct: 10 KLKRAIIISAVLHVILFAALIWSSFDENIEASAGGGGGSSIDAVMVDSGAVVEQYKRMQS 69
Query: 61 VVQFKGS--SQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLR 117
Q + + +E ++ + + + + + ++ + +QA + +
Sbjct: 70 QESSAKRSDEQRKMKEQQAAEELREKQAAEQERLKQLEKERLAAQEQKKQAEEAAKQAE 128
>gi|115379403|ref|ZP_01466506.1| putative periplasmic protein TonB [Stigmatella aurantiaca DW4/3-1]
gi|115363590|gb|EAU62722.1| putative periplasmic protein TonB [Stigmatella aurantiaca DW4/3-1]
Length = 348
Score = 37.6 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 30/207 (14%), Positives = 50/207 (24%), Gaps = 15/207 (7%)
Query: 58 EEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLR 117
++P+ Q + + QE + + + S G
Sbjct: 117 DQPMSQGQSRPSFEVPNARRKQEIALKTDPEQGPGMSVPNRSESDEVVGNAKRLRVQPGT 176
Query: 118 MPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQD 177
P S D L K I + + +
Sbjct: 177 GP-SDIDGSSGRAGLPGVSSLMPSQAVMDKLIGAAPNDHLRDVDEGDGTFLNTREWKYSS 235
Query: 178 AIAIVRNRVIANWNIPSDFKRF---------KKLRVKMHFQLNQKGFVLGKINVDVVGGT 228
V+ V +WN S R K ++ L+QKG V G
Sbjct: 236 FFNRVKQNVGMHWNPGSQLHRRDPTGAIYSGKDRYTLLNITLDQKGMVRDIQIEKSSG-- 293
Query: 229 ELVRRMLRENARKAVIKSQAFRLSPST 255
L A + ++Q F P+
Sbjct: 294 ---LDFLDLEAISSFQRAQPFPNPPAG 317
>gi|229510201|ref|ZP_04399681.1| ferric siderophore transport system binding protein TonB [Vibrio
cholerae B33]
gi|229517670|ref|ZP_04407115.1| ferric siderophore transport system binding protein TonB [Vibrio
cholerae RC9]
gi|229605477|ref|YP_002876181.1| ferric siderophore transport system binding protein TonB [Vibrio
cholerae MJ-1236]
gi|255746343|ref|ZP_05420290.1| ferric siderophore transport system binding protein TonB [Vibrio
cholera CIRS 101]
gi|262158302|ref|ZP_06029419.1| ferric siderophore transport system binding protein TonB [Vibrio
cholerae INDRE 91/1]
gi|13634084|sp|O52042|TONB_VIBCH RecName: Full=Protein tonB
gi|229345706|gb|EEO10679.1| ferric siderophore transport system binding protein TonB [Vibrio
cholerae RC9]
gi|229352646|gb|EEO17586.1| ferric siderophore transport system binding protein TonB [Vibrio
cholerae B33]
gi|229371963|gb|ACQ62385.1| ferric siderophore transport system binding protein TonB [Vibrio
cholerae MJ-1236]
gi|255736097|gb|EET91495.1| ferric siderophore transport system binding protein TonB [Vibrio
cholera CIRS 101]
gi|262029984|gb|EEY48631.1| ferric siderophore transport system binding protein TonB [Vibrio
cholerae INDRE 91/1]
Length = 244
Score = 37.6 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 24/237 (10%), Positives = 69/237 (29%), Gaps = 31/237 (13%)
Query: 9 ISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSS 68
+S+ H + L + V + + + +S++ + + + Q K S
Sbjct: 12 LSLAFHALLL-ITTDEAQVFAMPAGNPTQSVSINMVSMPKVA--PAQPEQTQTEQSKPES 68
Query: 69 QENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKI 128
+ V+ + + + K + + + +
Sbjct: 69 VKPTPVQEVVKTPPAKPKVKPHKPKPQTVKKPVPAEQVPSKSVAKPQPEKVERTAETAQK 128
Query: 129 SKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIA 188
T +Q Q + ++ + ++V A+V +V
Sbjct: 129 PAPTPNQQPSQPTAASQGITSQPILVDKP----------------------ALVSAQVQP 166
Query: 189 NWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIK 245
+ + + + V L+ +G + + + G L ++A +A+ +
Sbjct: 167 RYPRIARKRGIEG-TVMYEIWLDAQGNQIKQQLLSSSGT-----EALDQSALEAIKQ 217
>gi|323963120|gb|EGB58690.1| TolA protein [Escherichia coli H489]
Length = 410
Score = 37.6 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 15/119 (12%), Positives = 45/119 (37%), Gaps = 3/119 (2%)
Query: 2 RLENGLAISMILHVMFLLLLYF-NFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP 60
+L+ + IS +LHV+ L + +F+ + S+D + + + K +
Sbjct: 10 KLKRAIIISAVLHVILFAALIWSSFDENIEASAGGGGGSSIDAVMVDSGAVVEQYKRMQS 69
Query: 61 VVQFKGS--SQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLR 117
Q + + +E ++ + + + + + ++ + +QA + +
Sbjct: 70 QESSAKRSDEQRKMKEQQAAEELREKQAAEQERLKQLEKERLAAQEQKKQAEEAAKQAE 128
>gi|308183450|ref|YP_003927577.1| siderophore-mediated iron transport protein (tonB) [Helicobacter
pylori PeCan4]
gi|308065635|gb|ADO07527.1| siderophore-mediated iron transport protein (tonB) [Helicobacter
pylori PeCan4]
Length = 282
Score = 37.6 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 33/256 (12%), Positives = 76/256 (29%), Gaps = 14/256 (5%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
IS L+ + YF P+++ V +SK K E +
Sbjct: 18 SFLISFALYA--IGFGYFLLREDAPEPLAQAGTTKVTMSLASINTNSKVKTNAESAKPKE 75
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
+E + + + + K + + V +
Sbjct: 76 EPKEEPKKEEPKKEVTKPKPKPKPKPKPKPKPKPEPKPKPEPKPEPKPEPKVEEVKKEEP 135
Query: 126 QKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEK------SSRKRIPSQDAI 179
++ K +++ + S ++ + +V DK+E +K + + S + +
Sbjct: 136 KEEPKKEEAKEEAKEKSTPKQVTTKDIVKEKDKQEESNKTSEGATSEAQAYNPGVSNEFL 195
Query: 180 AIVRNRVIANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLREN 238
++ + + P + + V + F +N G V V +L
Sbjct: 196 MKIQTAISSKNRYPKMAQIRGIEGEVLVSFTINADGSVTDIKVVKSNTTD-----ILNHA 250
Query: 239 ARKAVIKSQAFRLSPS 254
A +A+ + P
Sbjct: 251 ALEAIKNAAHLFPKPE 266
>gi|297380522|gb|ADI35409.1| TonB family C-terminal domain-containing protein [Helicobacter
pylori v225d]
Length = 282
Score = 37.6 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 27/256 (10%), Positives = 72/256 (28%), Gaps = 14/256 (5%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDN------IYNEDYHSSKYKKIEE 59
IS L+ + YF + P+++ V + +++ K +E
Sbjct: 18 SFLISFALYA--IGFGYFLLREEAPAPLAQAGTTKVTMSLASINTNSNTKTNAESAKPKE 75
Query: 60 PVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMP 119
+ + V + + + K + + E P
Sbjct: 76 EPKEKPKEKPKKEEPKKEVSKPKPKPKPKPKPEPKPKPEPKPKPEPKPEPKVEEVKKEEP 135
Query: 120 VSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAI 179
K++ + ++ + ++ + +K + E + S + +
Sbjct: 136 KEEPKKEEAKEEAKEKSAPKQVTTKDIVKEKDKQEESNKTSEGATSEAQAYNPGVSNEFL 195
Query: 180 AIVRNRVIANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLREN 238
++ + + P + + V + F +N G V + +L
Sbjct: 196 MKIQTAISSKNRYPKMAQIRGIEGEVLVSFVINPDGSVTDIKVIKSNTTD-----ILNHA 250
Query: 239 ARKAVIKSQAFRLSPS 254
A +A+ + P
Sbjct: 251 ALEAIKNAAHLFPKPE 266
>gi|302665104|ref|XP_003024165.1| conserved hypothetical protein [Trichophyton verrucosum HKI 0517]
gi|291188210|gb|EFE43554.1| conserved hypothetical protein [Trichophyton verrucosum HKI 0517]
Length = 909
Score = 37.6 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 15/141 (10%), Positives = 35/141 (24%)
Query: 37 EMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATEN 96
E V+ + +E + +E V +E E + + +T A +
Sbjct: 764 EEKPVEPVKDEKDSPAPALAEDEVEVHSLPVVEETEPEAAKAAEVVEEKPAEVQTEAKQE 823
Query: 97 ETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRP 156
E K Q + + + + Q K + + +
Sbjct: 824 EAKPKEPQAEPQPEAQDEVKTENTTSTEPQSKETEAVKTEPEEPKPEETEPQEPKSEESK 883
Query: 157 DKKELLSKVEKSSRKRIPSQD 177
+ + E +
Sbjct: 884 KDQPNPVESEPEQIPAKNVEP 904
>gi|220917819|ref|YP_002493123.1| TonB family protein [Anaeromyxobacter dehalogenans 2CP-1]
gi|219955673|gb|ACL66057.1| TonB family protein [Anaeromyxobacter dehalogenans 2CP-1]
Length = 419
Score = 37.6 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 20/213 (9%), Positives = 51/213 (23%), Gaps = 11/213 (5%)
Query: 49 YHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHA-TENETKRSSSSKGE 107
+ E P ++ ++ + QE A R+ +
Sbjct: 173 QAAKSTPGKEGPAAPHGTGGEKLVIPEQRAQERLAVAPRPDAPGAGDVPVAPRTDQQRLS 232
Query: 108 QALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEK 167
+ + + +K D Q ++ + ++ + + +
Sbjct: 233 GGGQALQVPGGAGAQGGGRKSGIDRRLLPDPQNLARIAGGPSPDRLDGVEEGDSTALNTR 292
Query: 168 SSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFK-----KLRVKMHFQLNQKGFVLGKINV 222
S + + N + K + L+ G + +
Sbjct: 293 SFKYATFINRVGMAIYREWDPNRAYQARDPEGKVYPARDRTTSIELVLDGSGAIRFVKLL 352
Query: 223 DVVGGTELVRRMLRENARKAVIKSQAFRLSPST 255
D G L + +A + F P+
Sbjct: 353 DSSG-----LDFLDQEVVRAARAAGPFPNPPAG 380
>gi|326336139|ref|ZP_08202311.1| hypothetical protein HMPREF9071_1777 [Capnocytophaga sp. oral taxon
338 str. F0234]
gi|325691648|gb|EGD33615.1| hypothetical protein HMPREF9071_1777 [Capnocytophaga sp. oral taxon
338 str. F0234]
Length = 286
Score = 37.6 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 22/249 (8%), Positives = 65/249 (26%), Gaps = 18/249 (7%)
Query: 7 LAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKG 66
+ S+I+ ++ LLLL +P +++ + + V+
Sbjct: 13 VITSIIMGLVILLLLLAKMTTSNTLPPDEEGGIAITFGTD---NKGMGAINPPKSVEPAV 69
Query: 67 SSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQ 126
S + R V+ +R + + K + K +P +
Sbjct: 70 SHSQPTERPQEVENTPERQPSEQVLTQDTDAESVVIPKKENKKPKRETPKPEKTTPKKTE 129
Query: 127 KISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRV 186
+ ++ + ++ + K + ++ + + S
Sbjct: 130 QRPSSSTTDALSSVLNSSVKNPRTGTGNGNQGDDGVAGYKGDPKGDPYSNSFYGGNGEGS 189
Query: 187 IANWNIPSDFKRFKKLR-------------VKMHFQLNQKGFVLGKINVDVVGGTELVR- 232
K + V + ++++ G V+ +
Sbjct: 190 GGGAGKGWGLNGRKYISGKNMKQECNESGFVIVRIEVDRTGKVVRAKAGEKGTTNNAPCL 249
Query: 233 -RMLRENAR 240
+++A
Sbjct: 250 LEAAQKSAL 258
>gi|219916879|emb|CAQ63516.2| putative lipoprotein [Neisseria meningitidis]
Length = 457
Score = 37.6 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 19/180 (10%), Positives = 45/180 (25%), Gaps = 1/180 (0%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
+ + LA+S + + + +V D +
Sbjct: 12 MASILALSACISGGGGTPVVKSSETPSNKVTPPPPADTVSPAPGADTAGTASGGDGRESK 71
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTH-ATENETKRSSSSKGEQALKESALLRMPVS 121
+ + + H T E+ + + E KE+ P
Sbjct: 72 TEIPPKDTQGEGETAQAGADGGVQNDAPQHLETSTESTPEGTVESESTPKEAGEEIKPAP 131
Query: 122 PYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAI 181
D + +A + + + + V D S +++ P+ +A
Sbjct: 132 KEDTSEGKEAKETDPTQPSSTSESQDGTEENAVSEDTGMQASPPSETTEHTEPAMNAEDA 191
>gi|88798135|ref|ZP_01113722.1| hypothetical protein MED297_01825 [Reinekea sp. MED297]
gi|88779332|gb|EAR10520.1| hypothetical protein MED297_01825 [Reinekea sp. MED297]
Length = 533
Score = 37.6 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 20/156 (12%), Positives = 56/156 (35%), Gaps = 10/156 (6%)
Query: 103 SSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELL 162
+ ++ L+ + R ++ + E+ Q + ++ + ++
Sbjct: 241 EQERQRQLELAEQRRREAEQARQKAEESEEDSEEVQQALLAQQEAERRAAELAREQAARQ 300
Query: 163 SKVEKSSRKRIPSQDAIAIVR----NRVIANWNIPSDFKRFKK-LRVKMHFQLNQKGFVL 217
+ + + + Q A+ + R V + P ++F + + + F + +G +L
Sbjct: 301 REQQAAQLRTQAQQYALDLYRWEVLRDVYKRVSYPEWARQFNQEGVISIEFVVGSQGQLL 360
Query: 218 GKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSP 253
G + +L + R AV ++ F+ P
Sbjct: 361 GVTGLQPADAG-----LLGQELRDAVNRAAPFKPFP 391
>gi|323191084|gb|EFZ76349.1| protein TolA [Escherichia coli RN587/1]
Length = 421
Score = 37.6 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 15/119 (12%), Positives = 45/119 (37%), Gaps = 3/119 (2%)
Query: 2 RLENGLAISMILHVMFLLLLYF-NFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP 60
+L+ + IS +LHV+ L + +F+ + S+D + + + K +
Sbjct: 10 KLKRAIIISAVLHVILFAALIWSSFDENIEASAGGGGGSSIDAVMVDSGAVVEQYKRMQS 69
Query: 61 VVQFKGS--SQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLR 117
Q + + +E ++ + + + + + ++ + +QA + +
Sbjct: 70 QESSAKRSDEQRKMKEQQAAKELREKQAAEQERLKQLEKERLAAQEQKKQAEEAAKQAE 128
>gi|194366167|ref|YP_002028777.1| TonB family protein [Stenotrophomonas maltophilia R551-3]
gi|194348971|gb|ACF52094.1| TonB family protein [Stenotrophomonas maltophilia R551-3]
Length = 237
Score = 37.6 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 21/239 (8%), Positives = 63/239 (26%), Gaps = 37/239 (15%)
Query: 27 VQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFS 86
P+ Q+ + +
Sbjct: 28 WVATPPMLPPP------------------------------EQDVRISLRLLAPATPPQP 57
Query: 87 DQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEK 146
+ + T ++ +++ +S+ ++ +I + + + A
Sbjct: 58 VEERQADTPSQAQQARASQATKSPPPPTPTAAREGELAASEIGGRGRQPLPVAPPAAATD 117
Query: 147 KSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFK-RFKKLRVK 205
S + + S A + R+ P+ + R ++
Sbjct: 118 ASPAPASITAAPPAPDAPPADFQAGAA-SDQWEARLMARLERYRYYPAAARSRRQQGTAW 176
Query: 206 MHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPSTYKSWRNITL 264
+ ++++G +L G + ML + A + ++Q P K+ + + +
Sbjct: 177 VRASIDREGRLLALRLEQSSG-----QPMLDDAALQTFRRAQPLPPIPDELKAPQELVV 230
>gi|333007350|gb|EGK26830.1| protein TolA [Shigella flexneri VA-6]
Length = 418
Score = 37.6 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 15/122 (12%), Positives = 46/122 (37%), Gaps = 3/122 (2%)
Query: 2 RLENGLAISMILHVMFLLLLYF-NFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP 60
+L+ + IS +LHV+ L + +F+ + S+D + + + K +
Sbjct: 10 KLKRAIIISAVLHVILFAALIWSSFDENIEASAGGGGGSSIDAVMVDSGAVVEQYKRMQS 69
Query: 61 VVQFKGS--SQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRM 118
Q + + +E ++ + + + + + ++ + +QA + + +
Sbjct: 70 QESSAKRSDEQRKMKEQQAAEELREKQAAEQERLKQLEKERLAAQEQKKQAEEAAKQAEL 129
Query: 119 PV 120
Sbjct: 130 KQ 131
>gi|261868493|ref|YP_003256415.1| cell envelope integrity inner membrane protein TolA
[Aggregatibacter actinomycetemcomitans D11S-1]
gi|261413825|gb|ACX83196.1| cell envelope integrity inner membrane protein TolA
[Aggregatibacter actinomycetemcomitans D11S-1]
Length = 402
Score = 37.6 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 17/118 (14%), Positives = 34/118 (28%), Gaps = 12/118 (10%)
Query: 155 RPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKG 214
+ + I+ V + RF + +L+ G
Sbjct: 293 NKQGSQGSGASAGAGDGGKAGSRYAGIIYKSVKPYFR---GDSRFFGKVCDIRIELSSDG 349
Query: 215 FVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSP--STYKSWRNITLFFVPSK 270
+L V G + L A A+ +++ P Y+ ++ + F P K
Sbjct: 350 TILSYQKV--SGPND-----LCGAALNAIGQTRKMNEPPTPEEYEIFKRSIVTFDPRK 400
Score = 37.2 bits (84), Expect = 2.2, Method: Composition-based stats.
Identities = 24/180 (13%), Positives = 61/180 (33%), Gaps = 1/180 (0%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
+ IS+I+H+ LL + + + E + + I + + + Q K
Sbjct: 12 AVVISIIMHLALFGLLILSSLYHNIDIMGGGEGDNGEVIGAVMVDTGSAAQEWGRIQQQK 71
Query: 66 GSSQENLVRDF-SVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYD 124
+ + Q+ ++ ++ K E +R ++ L++ L +
Sbjct: 72 KGQADRQKKQALEDQKREEQKREEEKQREVLKEQQRQQEIARQKELEQQKELERQRFLAE 131
Query: 125 KQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRN 184
++K + + + L+ AE+ K + + ++A A V+
Sbjct: 132 QKKQQEEKARLEALEKQKQAEEAKAKQAAEAAKLKAEAEAKRLADAAKQAEEEAKAKVQA 191
>gi|24111985|ref|NP_706495.1| cell envelope integrity inner membrane protein TolA [Shigella
flexneri 2a str. 301]
gi|30062098|ref|NP_836269.1| cell envelope integrity inner membrane protein TolA [Shigella
flexneri 2a str. 2457T]
gi|82543166|ref|YP_407113.1| cell envelope integrity inner membrane protein TolA [Shigella
boydii Sb227]
gi|110804635|ref|YP_688155.1| cell envelope integrity inner membrane protein TolA [Shigella
flexneri 5 str. 8401]
gi|24050798|gb|AAN42202.1| membrane spanning protein [Shigella flexneri 2a str. 301]
gi|30040342|gb|AAP16075.1| membrane spanning protein [Shigella flexneri 2a str. 2457T]
gi|81244577|gb|ABB65285.1| TolA [Shigella boydii Sb227]
gi|110614183|gb|ABF02850.1| cell envelope integrity inner membrane protein TolA [Shigella
flexneri 5 str. 8401]
gi|313649618|gb|EFS14042.1| protein TolA [Shigella flexneri 2a str. 2457T]
gi|332761145|gb|EGJ91431.1| protein TolA [Shigella flexneri 2747-71]
gi|332763941|gb|EGJ94179.1| protein TolA [Shigella flexneri K-671]
gi|333007780|gb|EGK27256.1| protein TolA [Shigella flexneri K-218]
gi|333021466|gb|EGK40716.1| protein TolA [Shigella flexneri K-304]
Length = 413
Score = 37.6 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 15/122 (12%), Positives = 46/122 (37%), Gaps = 3/122 (2%)
Query: 2 RLENGLAISMILHVMFLLLLYF-NFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP 60
+L+ + IS +LHV+ L + +F+ + S+D + + + K +
Sbjct: 10 KLKRAIIISAVLHVILFAALIWSSFDENIEASAGGGGGSSIDAVMVDSGAVVEQYKRMQS 69
Query: 61 VVQFKGS--SQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRM 118
Q + + +E ++ + + + + + ++ + +QA + + +
Sbjct: 70 QESSAKRSDEQRKMKEQQAAEELREKQAAEQERLKQLEKERLAAQEQKKQAEEAAKQAEL 129
Query: 119 PV 120
Sbjct: 130 KQ 131
>gi|20270233|ref|NP_611578.1| CG30394, isoform B [Drosophila melanogaster]
gi|24656948|ref|NP_611579.1| CG30394, isoform A [Drosophila melanogaster]
gi|18447388|gb|AAL68258.1| RE05944p [Drosophila melanogaster]
gi|21645210|gb|AAF46715.2| CG30394, isoform A [Drosophila melanogaster]
gi|21645211|gb|AAF46714.2| CG30394, isoform B [Drosophila melanogaster]
Length = 831
Score = 37.6 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 12/139 (8%), Positives = 40/139 (28%), Gaps = 3/139 (2%)
Query: 26 NVQLLVPISRREMLSVDNI-YNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFS--VQENG 82
+PI ++ +D+ D + +E + K V
Sbjct: 477 PPLPPLPIDEVHVVPIDSKNSETDIKKLPVEAVEANPPEAKPLDVNLTVDKPKNNPPAVA 536
Query: 83 DRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGIS 142
D+ K ++ + + ++ A S + ++ K + ++ + +
Sbjct: 537 ASLPDKPKIGSSLLSASNTIDGAAIKKEEDVAAEEQKESKANADELLKTQKELKETKKLL 596
Query: 143 FAEKKSIDTVVVRPDKKEL 161
++ + + +
Sbjct: 597 AKTVGELNEELAKKNSFNQ 615
>gi|17232528|ref|NP_489076.1| hypothetical protein all5036 [Nostoc sp. PCC 7120]
gi|17134174|dbj|BAB76735.1| all5036 [Nostoc sp. PCC 7120]
Length = 470
Score = 37.6 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 37/279 (13%), Positives = 66/279 (23%), Gaps = 49/279 (17%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
L SM LH+ L NF L + + E ++ + K K EE
Sbjct: 22 LTYSFIGSMALHIALLASGLGNF----LTRVPQVEEEPIEIAIVDPVTEEKEKPPEETPE 77
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
K + + K T RS + ++ ++++ P
Sbjct: 78 VKKPEPLPVTRSEPQRSVASSEVAIAPKPQTTVITPVRSQPTVVQKPIEKTVATEKPQPV 137
Query: 123 YDKQKISKATNKEQD----------------LQGISFAEKKSIDTVVVRPDKKELLSKVE 166
+ I+ +N L+ I + S T + S
Sbjct: 138 AQPRVITANSNSPATSTVVTPSQPTGENNSRLREILGGIRDSRGTQANTGETTGSTSGQV 197
Query: 167 KSSRKRIPSQDAIAIV----------------------RNRVIANWNIPSDFKRFKKLRV 204
S + R + R + +
Sbjct: 198 GSPASNSTPAVTTPAIATAPTPPKIRTEPSEGSRSGNGRAACRECNARYPEAARRRGIEG 257
Query: 205 KMHFQLNQK--GFVLGKINVDVVGGTELVRRMLRENARK 241
K+ ++ G V G R L E +
Sbjct: 258 KVEVAVDTDAQGNVTNVRVARSSGN-----RELDEETLR 291
>gi|317406337|gb|EFV86568.1| hypothetical protein HMPREF0005_05164 [Achromobacter xylosoxidans
C54]
Length = 149
Score = 37.6 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 9/77 (11%), Positives = 27/77 (35%), Gaps = 6/77 (7%)
Query: 175 SQDAIAIVRNRVIANWNIPSDFKRFKK-LRVKMHFQLNQKGFVLGKINVDVVGGTELVRR 233
+ V+ R+I+++ P + +R + + + + + G + G
Sbjct: 29 QAEWTQAVQRRMISSFKFPPEAQRLSGPISLSLKIIVRRDGSIADVSVDRSSGDA----- 83
Query: 234 MLRENARKAVIKSQAFR 250
+ A + V ++
Sbjct: 84 AVDRAATRMVQRAGPLP 100
>gi|331667106|ref|ZP_08367971.1| protein TolA [Escherichia coli TA271]
gi|331065462|gb|EGI37355.1| protein TolA [Escherichia coli TA271]
Length = 421
Score = 37.6 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 15/119 (12%), Positives = 45/119 (37%), Gaps = 3/119 (2%)
Query: 2 RLENGLAISMILHVMFLLLLYF-NFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP 60
+L+ + IS +LHV+ L + +F+ + S+D + + + K +
Sbjct: 10 KLKRAIIISAVLHVILFAALIWSSFDESIEASAGGGGGSSIDAVMVDSGAVVEQYKRMQS 69
Query: 61 VVQFKGS--SQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLR 117
Q + + +E ++ + + + + + ++ + +QA + +
Sbjct: 70 QESSAKRSDEQRKMKEQQAAEELREKQAAEQERLKQLEKERLAAQEQKKQAEEAAKQAE 128
>gi|262276104|ref|ZP_06053913.1| TolA protein [Grimontia hollisae CIP 101886]
gi|262219912|gb|EEY71228.1| TolA protein [Grimontia hollisae CIP 101886]
Length = 343
Score = 37.6 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 14/184 (7%), Positives = 59/184 (32%), Gaps = 5/184 (2%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
+ S++LH + + L + + S++ + + ++ +
Sbjct: 12 AIVASVLLHALLIGGLL--WGADFTKVAHQPSGQSIEAVVIDPNVVNEQARKIRQQRDEA 69
Query: 66 GSSQE---NLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
++ + + R ++ + + E + E + +
Sbjct: 70 KRQEDARLRRLEQQAQLLEQQREQEEKRLRELKAEKLAAEKEAREAETERKRIAEAKKKA 129
Query: 123 YDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIV 182
++Q+ ++ + + ++ ++ R ++E K+ + R ++ A
Sbjct: 130 AEEQRQAEEAARLAKEKAVAAEAERQRVLEEQRKAEEERQRKLAEKKRAEEEARKAEEER 189
Query: 183 RNRV 186
+ ++
Sbjct: 190 QRKL 193
Score = 36.8 bits (83), Expect = 3.0, Method: Composition-based stats.
Identities = 19/195 (9%), Positives = 56/195 (28%), Gaps = 12/195 (6%)
Query: 77 SVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQ 136
Q + + E + + + Q + + +A K
Sbjct: 159 EEQRKAEEERQRKLAEKKRAEEEARKAEEERQRKLAEKKKAEEAARKAEAARKEAERKAA 218
Query: 137 DLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDF 196
+ + ++ +++ + + + + + AI + N + ++
Sbjct: 219 EAKRKQAEQEAALNELFSGLESESATRDTARGRFVNDEAARFGAIYTQMIKQNLLVDNNL 278
Query: 197 KRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPSTY 256
+ + + +++ G +L V L + AV+K +F +
Sbjct: 279 RGQE---CIVKMRISGSGLLLDVNEVGGN-------PSLCRATKAAVLKVSSFPMPDDKE 328
Query: 257 --KSWRNITLFFVPS 269
++I L P
Sbjct: 329 IAAQLQDIELTVKPE 343
>gi|328708567|ref|XP_003243731.1| PREDICTED: disheveled-associated activator of morphogenesis 2-like
isoform 2 [Acyrthosiphon pisum]
Length = 1107
Score = 37.6 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 25/167 (14%), Positives = 48/167 (28%), Gaps = 6/167 (3%)
Query: 8 AISMILHVMFLLLLYFNFN--VQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
+S+ H + L L Y + L I ++ L D + D + + K
Sbjct: 392 FLSLFQHFLLLPLEYGSLPQHWLLFDRIVQQITLQTDVGADNDVSPININVKDIIQLLAK 451
Query: 66 GSS--QENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVS-- 121
+ +EN + K + + + L +S
Sbjct: 452 EEELVAAKNKAEELEKENTSISASLAKKEQELDLRNQEKEDMEASISRIKERLEKEISIH 511
Query: 122 PYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKS 168
KQKIS+ + +LQ E+ + L + +
Sbjct: 512 LETKQKISELEDTSSELQHRIAYEQAERRKLEAMLTNGSLPDDAKVN 558
>gi|224583771|ref|YP_002637569.1| transport protein TonB [Salmonella enterica subsp. enterica serovar
Paratyphi C strain RKS4594]
gi|224468298|gb|ACN46128.1| energy transducer [Salmonella enterica subsp. enterica serovar
Paratyphi C strain RKS4594]
Length = 281
Score = 37.6 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 24/228 (10%), Positives = 57/228 (25%), Gaps = 19/228 (8%)
Query: 8 AISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGS 67
+S+ +H + L + Q++ + + ++V + D + + V
Sbjct: 55 LLSVGIHGAVVAGLLYTSVHQVIELPAPAQPITVTMVSPADLEPPQAVQPPPEPVVEPEP 114
Query: 68 SQ--------------ENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKES 113
E + + E + + +
Sbjct: 115 EPEPIPEPPKEAPVVIEKPKPKPKPKPKPKPVKKVEEQPKREVKPAAPRPASPFENSAPV 174
Query: 114 ALLRMPVSPYDKQKISKAT-NKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKR 172
S K +S T + + + + R K ++ + +
Sbjct: 175 RPTSSTASATSKPAVSVPTGPRALSRNQPQYPARAQALRIEGRVKVKFDVTSAGRVENVQ 234
Query: 173 IPSQDAIAIVRNRVI---ANWNIPSDFKRFKKLRVKMHFQLNQKGFVL 217
I S + V W + L V + F+LN +
Sbjct: 235 ILSAQPANMFEREVKNAMRKWRYEAGRPGS-GLVVNIIFRLNGTAQIE 281
>gi|74004919|ref|XP_535982.2| PREDICTED: similar to titin isoform N2-B [Canis familiaris]
Length = 12085
Score = 37.6 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 12/153 (7%), Positives = 37/153 (24%)
Query: 26 NVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRF 85
++ P S+ + + K+ E ++ + +E + + +
Sbjct: 7368 PPEIETPSSKAPEVVKELAPEVQVSEDVPKEPEPLPIEVPEAPKEVVPEKKVLVAPPKKP 7427
Query: 86 SDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAE 145
T E K + + V K+ + + + +
Sbjct: 7428 EVPPVTVPKAPEEVVPEKKVPVAPPKRPEVPPVTVPEAPKEVVPEKKVRVPPPKKPEVPS 7487
Query: 146 KKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDA 178
+ +K++ K +
Sbjct: 7488 VTVPEAPEEVVPEKKVRVPPPKKPEVPPVTVPE 7520
>gi|317047356|ref|YP_004115004.1| protein TolA [Pantoea sp. At-9b]
gi|316948973|gb|ADU68448.1| protein TolA [Pantoea sp. At-9b]
Length = 419
Score = 37.6 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 17/131 (12%), Positives = 39/131 (29%), Gaps = 17/131 (12%)
Query: 141 ISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFK 200
+ + + + + +A +++R D +K
Sbjct: 304 KNAPKSGNASGGGAAAGQGNQKKAGASGAEINSYMGQVVAAIQSRF-------YDADSYK 356
Query: 201 KLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPST--YKS 258
+ +L G ++ V GG + + A++A PS Y+
Sbjct: 357 GKECNLRIKLAPDGLLID---VKAEGGDPALCQAAVSAAKQA-----RIPKPPSQAVYEV 408
Query: 259 WRNITLFFVPS 269
++N + F P
Sbjct: 409 FKNAPMDFKPQ 419
>gi|206575743|ref|YP_002237968.1| protein TonB [Klebsiella pneumoniae 342]
gi|288934878|ref|YP_003438937.1| TonB family protein [Klebsiella variicola At-22]
gi|206564801|gb|ACI06577.1| protein TonB [Klebsiella pneumoniae 342]
gi|288889587|gb|ADC57905.1| TonB family protein [Klebsiella variicola At-22]
Length = 245
Score = 37.6 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 24/234 (10%), Positives = 60/234 (25%), Gaps = 29/234 (12%)
Query: 8 AISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGS 67
+S+ +H + L + Q++ S + + + + D + V
Sbjct: 14 LLSVAIHGAVVAGLLYTSVHQVIEQPSPTQPIEITMVAPADLEPPPAAQPVVEPVVEPDP 73
Query: 68 SQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQK 127
E V +E + + K K EQ ++ P +
Sbjct: 74 EPEPEVVPEPPKEAPVVIHKPEPKPKPKPKPKPKPEKKVEQPKRDVKPAAEPRPASPFEN 133
Query: 128 ISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVI 187
+ + + A+ R + + ++ RI
Sbjct: 134 NNTTPARTAPSTSTAAAKPTVTAPSGPRAISRVQPTYPARAQALRI-------------- 179
Query: 188 ANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARK 241
+ V++ F + G + + R + ++A +
Sbjct: 180 -------------EGTVRVKFDVTPDGRIDNLQILSAQPANMFEREV--KSAMR 218
>gi|269139919|ref|YP_003296620.1| cell envelope integrity inner membrane protein [Edwardsiella tarda
EIB202]
gi|267985580|gb|ACY85409.1| cell envelope integrity inner membrane protein [Edwardsiella tarda
EIB202]
gi|304559754|gb|ADM42418.1| TolA [Edwardsiella tarda FL6-60]
Length = 408
Score = 37.6 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 16/111 (14%), Positives = 42/111 (37%), Gaps = 1/111 (0%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPV 61
+L + IS+ILH++ + LL + ++ P+S + +++
Sbjct: 10 KLNRSVIISVILHIVLIGLLIWG-SLMQDNPMSEGGDGGGGGSAIDAVMVDPNAVVQQYN 68
Query: 62 VQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKE 112
Q + + Q+ + + + A E + ++ + QA ++
Sbjct: 69 RQQEQQNAAQRAEQQRQQKAEKQAQEMQRKQAEEQQRLKALEKERLQAQED 119
>gi|189237424|ref|XP_974277.2| PREDICTED: similar to cgmp-dependent protein kinase [Tribolium
castaneum]
Length = 723
Score = 37.6 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 11/145 (7%), Positives = 28/145 (19%), Gaps = 3/145 (2%)
Query: 47 EDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKG 106
+ K + R +
Sbjct: 8 KSKTYVIQDKFNNVPKPPTQNGTTRKPRAPQPGPQETPPVPPPPPVDQITRAPPPPVPQT 67
Query: 107 EQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSI---DTVVVRPDKKELLS 163
+ R P + IS T + + + ++ + P +
Sbjct: 68 TEDPPSPGPERAATPPPEPDAISTDTQIDSTEESVKVNQESQEGLERRPGLIPLPTNIDE 127
Query: 164 KVEKSSRKRIPSQDAIAIVRNRVIA 188
K +Q+ ++R +
Sbjct: 128 HGSGDVEKHPKTQEDEKLIREAIER 152
>gi|328708571|ref|XP_003243732.1| PREDICTED: disheveled-associated activator of morphogenesis 2-like
isoform 3 [Acyrthosiphon pisum]
Length = 1097
Score = 37.6 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 25/167 (14%), Positives = 48/167 (28%), Gaps = 6/167 (3%)
Query: 8 AISMILHVMFLLLLYFNFN--VQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
+S+ H + L L Y + L I ++ L D + D + + K
Sbjct: 382 FLSLFQHFLLLPLEYGSLPQHWLLFDRIVQQITLQTDVGADNDVSPININVKDIIQLLAK 441
Query: 66 GSS--QENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVS-- 121
+ +EN + K + + + L +S
Sbjct: 442 EEELVAAKNKAEELEKENTSISASLAKKEQELDLRNQEKEDMEASISRIKERLEKEISIH 501
Query: 122 PYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKS 168
KQKIS+ + +LQ E+ + L + +
Sbjct: 502 LETKQKISELEDTSSELQHRIAYEQAERRKLEAMLTNGSLPDDAKVN 548
>gi|310767762|gb|ADP12712.1| transport protein TonB [Erwinia sp. Ejp617]
Length = 271
Score = 37.6 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 26/224 (11%), Positives = 58/224 (25%), Gaps = 17/224 (7%)
Query: 7 LAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKG 66
L S+ LH + + + Q + + +SV + + + + V
Sbjct: 50 LLGSIALHGAVIGAMLYASLHQAVDMPKASQPISVSMV--APEMQPEPQAVPPDVAPEPE 107
Query: 67 SSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQ 126
+ E + K K E + +A L + K
Sbjct: 108 AEAEPEPVKKEPVAIPKPEPKPKPKPKPKPVKKEVVKPKPEVKPRPAAPLETRPAEQAKP 167
Query: 127 KISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVR--- 183
+ + S S+ L + + + + S + +R
Sbjct: 168 STAPKNSPSPSSALSSGPRALSVGKPSYPARAFALHIEGQVRVQFDVDSSGQVDNIRILS 227
Query: 184 -----------NRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFV 216
+ + W + K L + + F+LN +
Sbjct: 228 AEPRNMFEREVKQAMRKWRYEAGKPG-KDLTMNIQFKLNGGSSI 270
>gi|307720701|ref|YP_003891841.1| hypothetical protein Saut_0780 [Sulfurimonas autotrophica DSM
16294]
gi|306978794|gb|ADN08829.1| conserved hypothetical protein [Sulfurimonas autotrophica DSM
16294]
Length = 234
Score = 37.6 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 34/230 (14%), Positives = 74/230 (32%), Gaps = 42/230 (18%)
Query: 8 AISMILHVMFLLL---LYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQF 64
IS+ L +FL + FN + + +SV HS+K K + P+
Sbjct: 13 FISLSLFALFLFSFIYMMFNVSKTKKYGYKKENYISVSIKMTSSKHSAKKKTSKAPL--- 69
Query: 65 KGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYD 124
+ + D + K ++S K + + ++ +S
Sbjct: 70 -------------PNKKAVKNVDINNLFSDVWTKKINNSVKKPENKRRIEQIQKKISTTK 116
Query: 125 KQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRN 184
+ + T K LQ S +K++ + +A +++
Sbjct: 117 QNNVESVTQKLNALQTSH--------------------SSTQKATSAANEVNEYLAKIQD 156
Query: 185 RVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRM 234
V ++N+P + + VK +L+ G ++ + L +
Sbjct: 157 IVYQHFNVPQNSEGN---SVKTVIELDPFGKLIDFRILSYSNNEALNQEA 203
>gi|255730261|ref|XP_002550055.1| predicted protein [Candida tropicalis MYA-3404]
gi|240132012|gb|EER31570.1| predicted protein [Candida tropicalis MYA-3404]
Length = 731
Score = 37.6 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 26/186 (13%), Positives = 61/186 (32%), Gaps = 11/186 (5%)
Query: 24 NFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQF-KGSSQENLVRDFSVQENG 82
+F + + + V + + + + P K S V + S +
Sbjct: 340 SFPISSEQETVKSSSVPVAPVTSSNSINQDNASTSPPATTTRKRKSSVKSVEEPSATKKP 399
Query: 83 DRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKIS------KATNKEQ 136
+ K + + + S ++ ++ DK++ K
Sbjct: 400 RTIKSKKKEPKAKLKAEPESEPVTQEQPEQQPSKDDDDKSEDKEEAKLGKGRGKRKTAND 459
Query: 137 DLQGISFAEKKSIDTVVVRPDKKELLSKVEKS----SRKRIPSQDAIAIVRNRVIANWNI 192
+ + +F E+ + R KK+L+ K+E S +A +R++++ N+
Sbjct: 460 EEKRKNFLERNRVAASKCRQRKKQLIQKMEDELAFYSTGYRELSAQVAQLRSQLMTLKNV 519
Query: 193 PSDFKR 198
S K
Sbjct: 520 ISGHKD 525
>gi|260796867|ref|XP_002593426.1| hypothetical protein BRAFLDRAFT_70794 [Branchiostoma floridae]
gi|229278650|gb|EEN49437.1| hypothetical protein BRAFLDRAFT_70794 [Branchiostoma floridae]
Length = 2545
Score = 37.6 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 8/125 (6%), Positives = 25/125 (20%)
Query: 25 FNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDR 84
V+ P ++ V+ ++ K + +
Sbjct: 710 VEVKRTPPPVQKVSPPVEKASPPMEVQKPSSSVKSVPPPAKVQQPPPVEVQRAPSPVQKV 769
Query: 85 FSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFA 144
K + + A + V ++ + +
Sbjct: 770 SPPVEKASPPVEVQRAPPPVQKASPPVVKAPPPVEVQKPSAPVKKTPPAVKKPVAKTAQP 829
Query: 145 EKKSI 149
+K +
Sbjct: 830 KKTAE 834
>gi|296272943|ref|YP_003655574.1| TonB family protein [Arcobacter nitrofigilis DSM 7299]
gi|296097117|gb|ADG93067.1| TonB family protein [Arcobacter nitrofigilis DSM 7299]
Length = 268
Score = 37.6 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 27/247 (10%), Positives = 71/247 (28%), Gaps = 13/247 (5%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
L +S+ LH++ L +V P S + D Y + K + + + +
Sbjct: 7 ALILSIFLHLLILKTYKIKDDVVKDNPSSTKNPKKSDIKYVILKSAVKKVEPKITKPKEE 66
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
++ ++ + ++ + + K+ K E + +
Sbjct: 67 IPKEKVEKKEPVKKLIKEKPIYKKVKKSDIKVAKKREVKKEEVKKTSPKPIEKSEVNPNY 126
Query: 126 QKISKATNKEQDLQGISFAEKKSIDTVVVRPDK------KELLSKVEKSSRKRIPSQDAI 179
K++ ++ L+ + + + +E S + + I
Sbjct: 127 TKLNPTKLQKDTLEDFLSTPVQDVKMLDELTQSYIKLYGEEYNSFTKVQKVFLQKNLKDI 186
Query: 180 AIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENA 239
+ + + + + + F L G + I G L EN
Sbjct: 187 GRITQKYLRY--PDIAVRTRQSGMNIIEFTLYPNGDITHPIITSSSG-----YETLDENT 239
Query: 240 RKAVIKS 246
+ + +
Sbjct: 240 IQTIEIA 246
>gi|254420014|ref|ZP_05033738.1| TonB family C-terminal domain protein [Brevundimonas sp. BAL3]
gi|196186191|gb|EDX81167.1| TonB family C-terminal domain protein [Brevundimonas sp. BAL3]
Length = 239
Score = 37.6 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 21/204 (10%), Positives = 51/204 (25%), Gaps = 9/204 (4%)
Query: 39 LSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENET 98
+ V + + P G+ L + S + +
Sbjct: 1 MVVAVVQLGLLSMLAVGSVHPPTPDQGGAPVIELTLSPRAAFDSVDGSTEAAASKGGDHP 60
Query: 99 KRSSSSKGEQALKESALLRMPV--SPYDKQKISKATNKEQDLQG-ISFAEKKSIDTVVVR 155
K + + + A A + I+ + + L + ++
Sbjct: 61 KAAHEPEVQTAPVRPAPRPSLTLFPTFQTTPIALTSAVSEPLVSFQAEGGSEAEPGPDGA 120
Query: 156 PDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGF 215
D + L+ ++ + +V+ V + F L+++G
Sbjct: 121 QDLRRGLTGGGAAATSGANGGAQVDDYYAQVLRWVETHKRHPGGVTGLVTVAFTLDRRGR 180
Query: 216 VLGKINVDVVGGTELVRRMLRENA 239
V + G R + A
Sbjct: 181 VSDARILSSSG------RAALDAA 198
>gi|195354152|ref|XP_002043564.1| GM19307 [Drosophila sechellia]
gi|194127732|gb|EDW49775.1| GM19307 [Drosophila sechellia]
Length = 753
Score = 37.6 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 18/183 (9%), Positives = 40/183 (21%), Gaps = 21/183 (11%)
Query: 42 DNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRS 101
D I + K+ + Q + D ++ ++ +
Sbjct: 337 DLIPQDKAAWKKFPPKVLQLAQKPDFVEPEPSLDNIPEKETPFIENKPEKPVIIEVKDIK 396
Query: 102 SSSKGEQALKE---------------------SALLRMPVSPYDKQKISKATNKEQDLQG 140
+ + P S + ++ +Q LQ
Sbjct: 397 PLVPKPEDEADIQGWLQQCSETISQQLQLVINEDSSSKPASAEPEGIDFESEISKQQLQP 456
Query: 141 ISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFK 200
E K + + + + R+ + WN K +
Sbjct: 457 RIMGESKKKLSPESGWQNSFTVRLDDFEDIVDHNMTEFRDPQAKRIRSKWNQRFGLKLAE 516
Query: 201 KLR 203
LR
Sbjct: 517 NLR 519
>gi|221120547|ref|XP_002165606.1| PREDICTED: similar to predicted protein [Hydra magnipapillata]
Length = 7746
Score = 37.6 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 13/148 (8%), Positives = 43/148 (29%), Gaps = 5/148 (3%)
Query: 44 IYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSS 103
I E+ + E+ + ++ + ++ + A + K +
Sbjct: 5680 IAAEEAEKQRIAAKEDEKIHIAKEAENFCIAAEEAEKVRIAEEAEKARIAEKEVEKSQIA 5739
Query: 104 SKG----EQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVV-RPDK 158
++ A +E+ LR+ +K +I++ ++ + + + R
Sbjct: 5740 TEKAEILRIATEEAEKLRIKEEEAEKVRIAEEEAEKSHIATEEAEKLHISEETEKMRIAA 5799
Query: 159 KELLSKVEKSSRKRIPSQDAIAIVRNRV 186
+E + + +
Sbjct: 5800 EEAEKSLIAEEEAEKVHIVEEDAEKAHI 5827
>gi|85058863|ref|YP_454565.1| colicin import protein TolA [Sodalis glossinidius str. 'morsitans']
gi|84779383|dbj|BAE74160.1| colicin import protein TolA [Sodalis glossinidius str. 'morsitans']
Length = 294
Score = 37.6 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 34/305 (11%), Positives = 85/305 (27%), Gaps = 58/305 (19%)
Query: 2 RLENGLAISMILHVMFLLLLYF-NFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP 60
+L+ + +S+ LH + + +L + + + S+D + + + ++
Sbjct: 10 KLKRAIILSIALHCVLIAVLIWSSIHQPQETSAGGGGGSSIDAVMVDPGAVVQQYNRQQQ 69
Query: 61 VVQFKGSSQENLVRDFSVQE--------------------------NGDRFSDQTKTHAT 94
+Q+ ++ Q + + Q + A
Sbjct: 70 QQIDAQRAQQQRLKALEKQRLDAQEAAEAQQRQQAEQQKQAEEAAKQAEAAAAQAEAEAA 129
Query: 95 ENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVV 154
+++ + + A E+ + K + A + ++ + + +
Sbjct: 130 AAAKQQAEAEVKKAAAAEAQKQADAKAKQAAAKKATAAKQSSEVDDLLGGLTDAKNAPKS 189
Query: 155 RPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKG 214
S + S + +A VR + N D + + +L G
Sbjct: 190 GGAPAAGTSNSKLSGATGLEINGYLAQVRQAIS---NKFYDASNYSGKTCILRIKLAPDG 246
Query: 215 FVLGKINVDVVGGTELVRRMLRENARKAVIKSQ-----------AFRLSPSTYKSWRNIT 263
++ G + Q SP Y++ +N T
Sbjct: 247 MLISV----SPDGGDPA-------------LCQAAVSAAKLAAIPRPPSPKVYEAVKNAT 289
Query: 264 LFFVP 268
L F P
Sbjct: 290 LDFKP 294
>gi|83815214|ref|YP_446077.1| TonB family protein [Salinibacter ruber DSM 13855]
gi|83756608|gb|ABC44721.1| TonB family C-terminal domain protein [Salinibacter ruber DSM
13855]
Length = 237
Score = 37.6 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 24/222 (10%), Positives = 62/222 (27%), Gaps = 30/222 (13%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
G+A ++ILH LL F F ++ + V+ + + E +
Sbjct: 8 GVATTVILHGGLALL--FAFLTASRPRPAQLGYVEVEFGEFSPGQPVEATEQVEKTTTPE 65
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
+ S + + S+ E + ++ E + E+ +
Sbjct: 66 PQEEAPEPEAESDETAEEPESEPVNLPEEEQSEESVPPTEEETTVPEAEAQP------ET 119
Query: 126 QKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNR 185
++ + ++ S P E L + + + ++ A +R
Sbjct: 120 EQQADQQEPSEEPGEESGDPGSGSQEEAAAPYDIEGLDRDPERAPLPQYAEKVNARIR-- 177
Query: 186 VIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGG 227
+ +N G ++ ++ +
Sbjct: 178 --------------------VRITVNPDGRIVRRVPLLKGNP 199
>gi|15601664|ref|NP_233295.1| tonB1 protein [Vibrio cholerae O1 biovar eltor str. N16961]
gi|153801408|ref|ZP_01955994.1| tonB1 protein [Vibrio cholerae MZO-3]
gi|153823487|ref|ZP_01976154.1| tonB1 protein [Vibrio cholerae B33]
gi|254850075|ref|ZP_05239425.1| tonB1 protein [Vibrio cholerae MO10]
gi|9658346|gb|AAF96807.1| tonB1 protein [Vibrio cholerae O1 biovar El Tor str. N16961]
gi|124123074|gb|EAY41817.1| tonB1 protein [Vibrio cholerae MZO-3]
gi|126519001|gb|EAZ76224.1| tonB1 protein [Vibrio cholerae B33]
gi|254845780|gb|EET24194.1| tonB1 protein [Vibrio cholerae MO10]
Length = 249
Score = 37.6 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 24/237 (10%), Positives = 69/237 (29%), Gaps = 31/237 (13%)
Query: 9 ISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSS 68
+S+ H + L + V + + + +S++ + + + Q K S
Sbjct: 17 LSLAFHALLL-ITTDEAQVFAMPAGNPTQSVSINMVSMPKVA--PAQPEQTQTEQSKPES 73
Query: 69 QENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKI 128
+ V+ + + + K + + + +
Sbjct: 74 VKPTPVQEVVKTPPAKPKVKPHKPKPQTVKKPVPAEQVPSKSVAKPQPEKVERTAETAQK 133
Query: 129 SKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIA 188
T +Q Q + ++ + ++V A+V +V
Sbjct: 134 PAPTPNQQPSQPTAASQGITSQPILVDKP----------------------ALVSAQVQP 171
Query: 189 NWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIK 245
+ + + + V L+ +G + + + G L ++A +A+ +
Sbjct: 172 RYPRIARKRGIEG-TVMYEIWLDAQGNQIKQQLLSSSGT-----EALDQSALEAIKQ 222
>gi|328708569|ref|XP_001947056.2| PREDICTED: disheveled-associated activator of morphogenesis 2-like
isoform 1 [Acyrthosiphon pisum]
Length = 1108
Score = 37.6 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 25/167 (14%), Positives = 48/167 (28%), Gaps = 6/167 (3%)
Query: 8 AISMILHVMFLLLLYFNFN--VQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
+S+ H + L L Y + L I ++ L D + D + + K
Sbjct: 393 FLSLFQHFLLLPLEYGSLPQHWLLFDRIVQQITLQTDVGADNDVSPININVKDIIQLLAK 452
Query: 66 GSS--QENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVS-- 121
+ +EN + K + + + L +S
Sbjct: 453 EEELVAAKNKAEELEKENTSISASLAKKEQELDLRNQEKEDMEASISRIKERLEKEISIH 512
Query: 122 PYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKS 168
KQKIS+ + +LQ E+ + L + +
Sbjct: 513 LETKQKISELEDTSSELQHRIAYEQAERRKLEAMLTNGSLPDDAKVN 559
>gi|268590778|ref|ZP_06124999.1| TonB protein [Providencia rettgeri DSM 1131]
gi|291313555|gb|EFE54008.1| TonB protein [Providencia rettgeri DSM 1131]
Length = 321
Score = 37.6 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 24/249 (9%), Positives = 77/249 (30%), Gaps = 16/249 (6%)
Query: 1 MRLENGLAISMILHVMFLLLLYFNFNVQLLVPISR-REMLSVDN-------IYNEDYHSS 52
+R + LA+S+++H + +++ +PI E +++ + +
Sbjct: 3 IRYKLALALSLVIH--IIAIMFIALQTGRAIPIVEGMETITLSLGGQMGSSGGTGEQSNK 60
Query: 53 KYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKE 112
K + E + + ++ + + + +KT + +
Sbjct: 61 KQVQSHEVISESPSKAEAASQQKQMSKSQPNESKIPSKTQLKNSLIPVNIPVDNTVESPL 120
Query: 113 SALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKR 172
+ + + + ++ + ++ K + + ++ + + + K
Sbjct: 121 LTQKTKEKTKPEISQSVQGKKPKEQSKLLNNNTKNNTENQLIANKISHETQQGSQEAAKE 180
Query: 173 IPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVR 232
IP + + K +L F N G +G + +
Sbjct: 181 IPLHSTAENQSSTSPSASESSQSGKGNNRLSGNSQFAANGDGS------YTALGSSGISY 234
Query: 233 RMLRENARK 241
+L++ A +
Sbjct: 235 TILQDAAPR 243
>gi|254442490|ref|ZP_05055966.1| hypothetical protein VDG1235_723 [Verrucomicrobiae bacterium
DG1235]
gi|198256798|gb|EDY81106.1| hypothetical protein VDG1235_723 [Verrucomicrobiae bacterium
DG1235]
Length = 397
Score = 37.6 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 36/249 (14%), Positives = 74/249 (29%), Gaps = 14/249 (5%)
Query: 26 NVQLLVPISRREMLSVDNIYNED--YHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGD 83
+ + N+ + ++ + + G E + + + E+
Sbjct: 152 PPPTATQEPQESAQPQEPAQNQPMLQAVAPSEEFQRREIPLAGELDEADLEEEGIAEHNY 211
Query: 84 RFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISF 143
SD+ T+ + + E A + S L VSP +++
Sbjct: 212 EPSDEAPTNILDLIEGEEEEGEEEPAAQASPELMASVSPLNQEANPAEDGVPSPRARPQL 271
Query: 144 AEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWN--IPSDFKRFKK 201
+ R + K + + + V NW+ + +K
Sbjct: 272 PRLPAGPVRDSRLGVSSIGQLSV--DAKASKFGEYMERLIETVKLNWDDLVQRSSSVERK 329
Query: 202 LRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPST----YK 257
VK+ F LN+ G V ++ G T V + R A+ + F P +
Sbjct: 330 SVVKIRFMLNKDGIVTDIEILE--GTTAKVFGIHM--CRLAIERGVPFGPWPEGLVDMFG 385
Query: 258 SWRNITLFF 266
++T F
Sbjct: 386 DEEDVTFNF 394
>gi|261343493|ref|ZP_05971138.1| protein TolA [Providencia rustigianii DSM 4541]
gi|282568639|gb|EFB74174.1| protein TolA [Providencia rustigianii DSM 4541]
Length = 377
Score = 37.6 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 14/120 (11%), Positives = 33/120 (27%), Gaps = 10/120 (8%)
Query: 152 VVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLN 211
+KS ++ + + + + ++ ++ +L
Sbjct: 265 SKQGGQTAAGSGGGKKSGASNADVDSYAGKIKAAIQSKFYDSATYRGR---TCELQLKLA 321
Query: 212 QKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQ-AFRLSPSTYKSWRN--ITLFFVP 268
G ++ L E A +A + S Y+++ TL F P
Sbjct: 322 PDGLLVS----ITPKNGPANDPALCEAAIRAAKLATMPKPPSREVYETFNKSGSTLVFKP 377
>gi|317487217|ref|ZP_07946015.1| TonB family domain-containing protein [Bilophila wadsworthia 3_1_6]
gi|316921507|gb|EFV42795.1| TonB family domain-containing protein [Bilophila wadsworthia 3_1_6]
Length = 170
Score = 37.2 bits (84), Expect = 2.2, Method: Composition-based stats.
Identities = 16/128 (12%), Positives = 36/128 (28%), Gaps = 7/128 (5%)
Query: 120 VSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAI 179
++P + T Q + + + K + + RKR +
Sbjct: 23 IAPRPPEPEPSFTTVVQMDMASPAVATSREKGIGIAAASPRDMDKADAADRKRQAFLRYL 82
Query: 180 AIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENA 239
+ V + + + F + G + G+ L +A
Sbjct: 83 DDIDEAV--HARRLDGGETGLIGVAEYMFTVRPDGTFTD-PVLRASSGS----PQLDASA 135
Query: 240 RKAVIKSQ 247
R+AV+ +
Sbjct: 136 RRAVLAAS 143
>gi|283478253|emb|CAY74169.1| Protein tonB [Erwinia pyrifoliae DSM 12163]
Length = 271
Score = 37.2 bits (84), Expect = 2.2, Method: Composition-based stats.
Identities = 26/224 (11%), Positives = 60/224 (26%), Gaps = 17/224 (7%)
Query: 7 LAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKG 66
L S+ LH + + + Q + + +SV + + + + V
Sbjct: 50 LLGSIALHGAVIGAMLYASLHQAVDMPKASQPISVSMV--APEMQPEPQAVPPDVAPEPE 107
Query: 67 SSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQ 126
+ E + + + K K E + +A L + K
Sbjct: 108 AEAEPEPEPVKKEPVAIPKPEPKPKPKPKPVKKEVVKPKPEVKPRPAAPLETRPAEQAKP 167
Query: 127 KISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVR--- 183
+ + S S+ L + + + + S + +R
Sbjct: 168 STAPKNSPSPSSALSSGPRALSVGKPSYPARAFALHIEGQVRVQFDVDSSGQVDNIRILS 227
Query: 184 -----------NRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFV 216
+ + W + K L + + F+LN +
Sbjct: 228 AEPRNMFEREVKQAMRKWRYEAGKPG-KDLTMNIQFKLNGGSSI 270
>gi|238927098|ref|ZP_04658858.1| TonB-dependent receptor [Selenomonas flueggei ATCC 43531]
gi|238885078|gb|EEQ48716.1| TonB-dependent receptor [Selenomonas flueggei ATCC 43531]
Length = 267
Score = 37.2 bits (84), Expect = 2.2, Method: Composition-based stats.
Identities = 12/107 (11%), Positives = 29/107 (27%), Gaps = 11/107 (10%)
Query: 4 ENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQ 63
S ++H + LLL + +++ +D D+
Sbjct: 8 RRAYITSAVIHFVIFLLLAIGLGAVVAK--QEQQVYEIDL-QASDFSQG--------SGH 56
Query: 64 FKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQAL 110
G S E+L + E + + + ++ +
Sbjct: 57 EGGGSAESLFPEPLKAEEVAKRVETVQQMPVPITPSTAAVPSPDAVT 103
>gi|221231867|ref|YP_002511019.1| IgA-protease [Streptococcus pneumoniae ATCC 700669]
gi|220674327|emb|CAR68873.1| IgA-protease [Streptococcus pneumoniae ATCC 700669]
Length = 2159
Score = 37.2 bits (84), Expect = 2.2, Method: Composition-based stats.
Identities = 26/229 (11%), Positives = 72/229 (31%), Gaps = 18/229 (7%)
Query: 3 LENGLAISMIL---HVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEE 59
+ NG+ +S+ H++ + +PI + Y Y K +
Sbjct: 143 MGNGVLVSVHALENHLLLNYNTDYELTSGEKLPIPKE---------ISGYTYIGYIKEGK 193
Query: 60 PVVQFKGSSQENLVRDFSVQENGD-RFSDQTKTHATENETKRSSSSKGEQALKESALLRM 118
F+ S+QE + Q+ D + H + + + + E ++
Sbjct: 194 TTSDFEVSNQEKSAATPTKQQKVDYNVTPNFVDHPSTVQAIQEQTPVSSTKPTEVQVVEK 253
Query: 119 PVSPY---DKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPS 175
P S +++ ++++ ++ L E K + + + + +
Sbjct: 254 PFSTELINPRKEEKQSSDSQEQLAEHKNLETKKEEKISPKEKTGVNTLNPQDEVLSGQLN 313
Query: 176 QDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFV-LGKINVD 223
+ + + + + + L + ++ Q+G + V
Sbjct: 314 KPELLYRDETIETKIDFQEEIQENPDL-AEGTVRVKQEGALGKKVEIVR 361
>gi|315498309|ref|YP_004087113.1| tonb family protein [Asticcacaulis excentricus CB 48]
gi|315416321|gb|ADU12962.1| TonB family protein [Asticcacaulis excentricus CB 48]
Length = 249
Score = 37.2 bits (84), Expect = 2.2, Method: Composition-based stats.
Identities = 16/197 (8%), Positives = 45/197 (22%), Gaps = 3/197 (1%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
+ +S+ +H + + I L V+ + E + I + +
Sbjct: 37 AIGVSLAVHAALAAYIVSTQFRLTTLEIEDTAPLVVEMVPIESRRAPPKPVIMPDTPKPE 96
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
E +E Q + + A D
Sbjct: 97 TPVVEPKPLLQ-PRETPTPVVAQVAPLEMTPVKAPPVQAPVAPPVVAKAAPAAAQPRNDF 155
Query: 126 QKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNR 185
+ + + + K+ + ++ + S + + R
Sbjct: 156 VGVDVESALNSNPPPAYPPQAKARREEGTVQLRLQVRPDGTVGEVQVQASSGYMRLDRAA 215
Query: 186 V--IANWNIPSDFKRFK 200
+ + W + +
Sbjct: 216 IDSVKRWKFRPATRGGQ 232
>gi|11863542|emb|CAC18800.1| AKAP550 [Drosophila melanogaster]
Length = 3347
Score = 37.2 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 17/173 (9%), Positives = 46/173 (26%), Gaps = 13/173 (7%)
Query: 29 LLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQ 88
L P + SV+ + + K E +E + +Q
Sbjct: 1267 LKKPEDPKGHSSVE-------------PKTPNLEEPKPQETEQQKSQEVAEELPQKPEEQ 1313
Query: 89 TKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKS 148
T+ + A +++ Q ++ + + + +
Sbjct: 1314 VVAIVTQVLDTLVDDTVKAVAAEQTTQTSPAPEEQSPQILAMESPATSVRVKPTEVDSTT 1373
Query: 149 IDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKK 201
T L+ +V++ ++ Q A + + +N + +
Sbjct: 1374 QTTPKNEAGSSLLVEQVQQVLQEDDAQQSAGMTIEDEDYSNQQAAAAVENANS 1426
>gi|11863541|emb|CAC18799.1| AKAP550 [Drosophila melanogaster]
Length = 3554
Score = 37.2 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 17/173 (9%), Positives = 46/173 (26%), Gaps = 13/173 (7%)
Query: 29 LLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQ 88
L P + SV+ + + K E +E + +Q
Sbjct: 1474 LKKPEDPKGHSSVE-------------PKTPNLEEPKPQETEQQKSQEVAEELPQKPEEQ 1520
Query: 89 TKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKS 148
T+ + A +++ Q ++ + + + +
Sbjct: 1521 VVAIVTQVLDTLVDDTVKAVAAEQTTQTSPAPEEQSPQILAMESPATSVRVKPTEVDSTT 1580
Query: 149 IDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKK 201
T L+ +V++ ++ Q A + + +N + +
Sbjct: 1581 QTTPKNEAGSSLLVEQVQQVLQEDDAQQSAGMTIEDEDYSNQQAAAAVENANS 1633
>gi|328699651|ref|XP_003241005.1| PREDICTED: nucleosome-remodeling factor subunit NURF301-like isoform
2 [Acyrthosiphon pisum]
Length = 2445
Score = 37.2 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 17/200 (8%), Positives = 52/200 (26%), Gaps = 18/200 (9%)
Query: 28 QLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSD 87
+ PI + V ++ + S + +++E +
Sbjct: 1942 PTVKPIEPTPSVPV-------PNNIPESLTQIKTEPPSKSPVNKIP---AIKEEPIDSPN 1991
Query: 88 QTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKK 147
+ K E E+ + + Y +Q++ + +
Sbjct: 1992 SFVVTPNYISQSIKNVLKNEDLNPETQEKLLQLQKYQEQQLRDPVPQTSVPSSPARKRPY 2051
Query: 148 SIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMH 207
D + K+ + S ++++ D ++ ++L+ K+
Sbjct: 2052 EADNLAEFEPPKKSTERDNSGSLVSPE--------QSKLYQTLKQGDDHRKMQQLQSKLQ 2103
Query: 208 FQLNQKGFVLGKINVDVVGG 227
++ V +
Sbjct: 2104 NEIAANVTVSSADSTTTSNN 2123
>gi|270007723|gb|EFA04171.1| hypothetical protein TcasGA2_TC014420 [Tribolium castaneum]
Length = 705
Score = 37.2 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 24/190 (12%), Positives = 50/190 (26%), Gaps = 8/190 (4%)
Query: 3 LENGLAISMILHVMFLLLLY---FNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEE 59
++ +S LH L++ N + L V+ NE + ++ E
Sbjct: 421 MKETELLSPNLHTALLMIYLESSLNLPKFSKTSPNPYAELEVE---NETKTTDPEQQTCE 477
Query: 60 PVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMP 119
P+ + + + + + K A K L
Sbjct: 478 PLWETGFTFLLRDPKKAVLNLRIIDAESKNKMGEVLKNDSLEDEKDDSDAPKPQKKLVKQ 537
Query: 120 VSPYD--KQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQD 177
S +K ++ + + K +L + +K I
Sbjct: 538 ESNLSMISKKSVTTESEGLASEDNATINSSFDSEGDTNLGKIKLSLSYSQQRQKLIVEVH 597
Query: 178 AIAIVRNRVI 187
+ +VR R
Sbjct: 598 EVDLVRKRAQ 607
>gi|261343632|ref|ZP_05971277.1| protein TonB [Providencia rustigianii DSM 4541]
gi|282568015|gb|EFB73550.1| protein TonB [Providencia rustigianii DSM 4541]
Length = 244
Score = 37.2 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 30/256 (11%), Positives = 67/256 (26%), Gaps = 30/256 (11%)
Query: 1 MRLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP 60
+RL + IS+ +H + FN E +S+ + + +
Sbjct: 4 IRLVVIIGISLSIHAGLAMAWIFNQP----KFPQPEEPISIAMLS--------FAEPAAE 51
Query: 61 VVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPV 120
S E +V + E K+ K E ++ +
Sbjct: 52 TPVETSSEPEPVVEPEPEPVIEPVVEPVIALPQKKPEVKKKPEPKKEPKKEQKKIKEEQK 111
Query: 121 SPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIA 180
K ++ +++ Q+ K T +
Sbjct: 112 PVEKKLAMNNSSSSNQEPTNKELTNKVGDTTAKNTSPVASQTQGSRGPKALNKQLPEYPD 171
Query: 181 IVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENAR 240
R K VK+ + +++ G V V+ + + +
Sbjct: 172 RARRL-------------GKNGYVKVRYDIDEDGRVQNVEFVETSPKG-----LFERDVK 213
Query: 241 KAVIKSQAFRLSPSTY 256
+A+ + + +L Y
Sbjct: 214 RAMNRWRYEKLPAKGY 229
>gi|332093800|gb|EGI98854.1| protein TolA [Shigella boydii 5216-82]
Length = 400
Score = 37.2 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 15/119 (12%), Positives = 45/119 (37%), Gaps = 3/119 (2%)
Query: 2 RLENGLAISMILHVMFLLLLYF-NFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP 60
+L+ + IS +LHV+ L + +F+ + S+D + + + K +
Sbjct: 10 KLKRAIIISAVLHVILFAALIWSSFDENIEASAGGGGGSSIDAVMVDSGAVVEQYKRMQS 69
Query: 61 VVQFKGS--SQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLR 117
Q + + +E ++ + + + + + ++ + +QA + +
Sbjct: 70 QESSAKRSDEQRKMKEQQAAEELREKQAAEQERLKQLEKERLAAQEQKKQAEEAAKQAE 128
>gi|330910490|gb|EGH39000.1| TolA protein [Escherichia coli AA86]
Length = 410
Score = 37.2 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 15/119 (12%), Positives = 45/119 (37%), Gaps = 3/119 (2%)
Query: 2 RLENGLAISMILHVMFLLLLYF-NFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP 60
+L+ + IS +LHV+ L + +F+ + S+D + + + K +
Sbjct: 10 KLKRAIIISAVLHVILFAALIWSSFDENIEASAGGGGGSSIDAVMVDSGAVVEQYKRMQS 69
Query: 61 VVQFKGS--SQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLR 117
Q + + +E ++ + + + + + ++ + +QA + +
Sbjct: 70 QESSAKRSDEQRKMKEQQAAEELREKQAAEQERLKQLEKERLAAQEQKKQAEEAAKQAE 128
>gi|323967342|gb|EGB62763.1| TolA protein [Escherichia coli M863]
gi|327254428|gb|EGE66050.1| protein TolA [Escherichia coli STEC_7v]
Length = 421
Score = 37.2 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 15/119 (12%), Positives = 45/119 (37%), Gaps = 3/119 (2%)
Query: 2 RLENGLAISMILHVMFLLLLYF-NFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP 60
+L+ + IS +LHV+ L + +F+ + S+D + + + K +
Sbjct: 10 KLKRAIIISAVLHVILFAALIWSSFDENIEASAGGGGGSSIDAVMVDSGAVVEQYKRMQS 69
Query: 61 VVQFKGS--SQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLR 117
Q + + +E ++ + + + + + ++ + +QA + +
Sbjct: 70 QESSAKRSDEQRKMKEQQAAEELREKQAAEQERLKQLEKERLAAQEQKKQAEEAAKQAE 128
>gi|323958483|gb|EGB54189.1| TolA protein [Escherichia coli H263]
Length = 395
Score = 37.2 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 15/119 (12%), Positives = 45/119 (37%), Gaps = 3/119 (2%)
Query: 2 RLENGLAISMILHVMFLLLLYF-NFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP 60
+L+ + IS +LHV+ L + +F+ + S+D + + + K +
Sbjct: 10 KLKRAIIISAVLHVILFAALIWSSFDENIEASAGGGGGSSIDAVMVDSGAVVEQYKRMQS 69
Query: 61 VVQFKGS--SQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLR 117
Q + + +E ++ + + + + + ++ + +QA + +
Sbjct: 70 QESSAKRSDEQRKMKEQQAAEELREKQAAEQERLKQLEKERLAAQEQKKQAEEAAKQAE 128
>gi|320179420|gb|EFW54377.1| TolA protein [Shigella boydii ATCC 9905]
Length = 400
Score = 37.2 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 15/119 (12%), Positives = 45/119 (37%), Gaps = 3/119 (2%)
Query: 2 RLENGLAISMILHVMFLLLLYF-NFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP 60
+L+ + IS +LHV+ L + +F+ + S+D + + + K +
Sbjct: 10 KLKRAIIISAVLHVILFAALIWSSFDENIEASAGGGGGSSIDAVMVDSGAVVEQYKRMQS 69
Query: 61 VVQFKGS--SQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLR 117
Q + + +E ++ + + + + + ++ + +QA + +
Sbjct: 70 QESSAKRSDEQRKMKEQQAAEELREKQAAEQERLKQLEKERLAAQEQKKQAEEAAKQAE 128
>gi|320172958|gb|EFW48186.1| TolA protein [Shigella dysenteriae CDC 74-1112]
gi|320183981|gb|EFW58805.1| TolA protein [Shigella flexneri CDC 796-83]
Length = 393
Score = 37.2 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 15/119 (12%), Positives = 45/119 (37%), Gaps = 3/119 (2%)
Query: 2 RLENGLAISMILHVMFLLLLYF-NFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP 60
+L+ + IS +LHV+ L + +F+ + S+D + + + K +
Sbjct: 10 KLKRAIIISAVLHVILFAALIWSSFDENIEASAGGGGGSSIDAVMVDSGAVVEQYKRMQS 69
Query: 61 VVQFKGS--SQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLR 117
Q + + +E ++ + + + + + ++ + +QA + +
Sbjct: 70 QESSAKRSDEQRKMKEQQAAEELREKQAAEQERLKQLEKERLAAQEQKKQAEEAAKQAE 128
>gi|312965175|ref|ZP_07779412.1| protein TolA [Escherichia coli 2362-75]
gi|312290266|gb|EFR18149.1| protein TolA [Escherichia coli 2362-75]
Length = 416
Score = 37.2 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 15/119 (12%), Positives = 45/119 (37%), Gaps = 3/119 (2%)
Query: 2 RLENGLAISMILHVMFLLLLYF-NFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP 60
+L+ + IS +LHV+ L + +F+ + S+D + + + K +
Sbjct: 10 KLKRAIIISAVLHVILFAALIWSSFDENIEASAGGGGGSSIDAVMVDSGAVVEQYKRMQS 69
Query: 61 VVQFKGS--SQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLR 117
Q + + +E ++ + + + + + ++ + +QA + +
Sbjct: 70 QESSAKRSDEQRKMKEQQAAEELREKQAAEQERLKQLEKERLAAQEQKKQAEEAAKQAE 128
>gi|309700961|emb|CBJ00258.1| protein tola [Escherichia coli ETEC H10407]
Length = 432
Score = 37.2 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 15/119 (12%), Positives = 45/119 (37%), Gaps = 3/119 (2%)
Query: 2 RLENGLAISMILHVMFLLLLYF-NFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP 60
+L+ + IS +LHV+ L + +F+ + S+D + + + K +
Sbjct: 10 KLKRAIIISAVLHVILFAALIWSSFDENIEASAGGGGGSSIDAVMVDSGAVVEQYKRMQS 69
Query: 61 VVQFKGS--SQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLR 117
Q + + +E ++ + + + + + ++ + +QA + +
Sbjct: 70 QESSAKRSDEQRKMKEQQAAEELREKQAAEQERLKQLEKERLAAQEQKKQAEEAAKQAE 128
>gi|331682169|ref|ZP_08382791.1| protein TolA [Escherichia coli H299]
gi|331080593|gb|EGI51769.1| protein TolA [Escherichia coli H299]
Length = 429
Score = 37.2 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 15/119 (12%), Positives = 45/119 (37%), Gaps = 3/119 (2%)
Query: 2 RLENGLAISMILHVMFLLLLYF-NFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP 60
+L+ + IS +LHV+ L + +F+ + S+D + + + K +
Sbjct: 10 KLKRAIIISAVLHVILFAALIWSSFDENIEASAGGGGGSSIDAVMVDSGAVVEQYKRMQS 69
Query: 61 VVQFKGS--SQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLR 117
Q + + +E ++ + + + + + ++ + +QA + +
Sbjct: 70 QESSAKRSDEQRKMKEQQAAEELREKQAAEQERLKQLEKERLAAQEQKKQAEEAAKQAE 128
>gi|331645890|ref|ZP_08346993.1| protein TolA [Escherichia coli M605]
gi|331044642|gb|EGI16769.1| protein TolA [Escherichia coli M605]
Length = 415
Score = 37.2 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 15/119 (12%), Positives = 45/119 (37%), Gaps = 3/119 (2%)
Query: 2 RLENGLAISMILHVMFLLLLYF-NFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP 60
+L+ + IS +LHV+ L + +F+ + S+D + + + K +
Sbjct: 10 KLKRAIIISAVLHVILFAALIWSSFDENIEASAGGGGGSSIDAVMVDSGAVVEQYKRMQS 69
Query: 61 VVQFKGS--SQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLR 117
Q + + +E ++ + + + + + ++ + +QA + +
Sbjct: 70 QESSAKRSDEQRKMKEQQAAEELREKQAAEQERLKQLEKERLAAQEQKKQAEEAAKQAE 128
>gi|306812854|ref|ZP_07447047.1| cell envelope integrity inner membrane protein TolA [Escherichia
coli NC101]
gi|305853617|gb|EFM54056.1| cell envelope integrity inner membrane protein TolA [Escherichia
coli NC101]
Length = 419
Score = 37.2 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 15/119 (12%), Positives = 45/119 (37%), Gaps = 3/119 (2%)
Query: 2 RLENGLAISMILHVMFLLLLYF-NFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP 60
+L+ + IS +LHV+ L + +F+ + S+D + + + K +
Sbjct: 10 KLKRAIIISAVLHVILFAALIWSSFDENIEASAGGGGGSSIDAVMVDSGAVVEQYKRMQS 69
Query: 61 VVQFKGS--SQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLR 117
Q + + +E ++ + + + + + ++ + +QA + +
Sbjct: 70 QESSAKRSDEQRKMKEQQAAEELREKQAAEQERLKQLEKERLAAQEQKKQAEEAAKQAE 128
>gi|301020789|ref|ZP_07184853.1| protein TolA [Escherichia coli MS 69-1]
gi|300398435|gb|EFJ81973.1| protein TolA [Escherichia coli MS 69-1]
Length = 421
Score = 37.2 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 15/119 (12%), Positives = 45/119 (37%), Gaps = 3/119 (2%)
Query: 2 RLENGLAISMILHVMFLLLLYF-NFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP 60
+L+ + IS +LHV+ L + +F+ + S+D + + + K +
Sbjct: 10 KLKRAIIISAVLHVILFAALIWSSFDENIEASAGGGGGSSIDAVMVDSGAVVEQYKRMQS 69
Query: 61 VVQFKGS--SQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLR 117
Q + + +E ++ + + + + + ++ + +QA + +
Sbjct: 70 QESSAKRSDEQRKMKEQQAAEELREKQAAEQERLKQLEKERLAAQEQKKQAEEAAKQAE 128
>gi|291281682|ref|YP_003498500.1| TolA colicin import membrane protein [Escherichia coli O55:H7 str.
CB9615]
gi|290761555|gb|ADD55516.1| TolA colicin import membrane protein [Escherichia coli O55:H7 str.
CB9615]
gi|320654325|gb|EFX22378.1| cell envelope integrity inner membrane protein TolA [Escherichia
coli O55:H7 str. 3256-97 TW 07815]
gi|320659957|gb|EFX27499.1| cell envelope integrity inner membrane protein TolA [Escherichia
coli O55:H7 str. USDA 5905]
Length = 421
Score = 37.2 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 15/119 (12%), Positives = 45/119 (37%), Gaps = 3/119 (2%)
Query: 2 RLENGLAISMILHVMFLLLLYF-NFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP 60
+L+ + IS +LHV+ L + +F+ + S+D + + + K +
Sbjct: 10 KLKRAIIISAVLHVILFAALIWSSFDENIEASAGGGGGSSIDAVMVDSGAVVEQYKRMQS 69
Query: 61 VVQFKGS--SQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLR 117
Q + + +E ++ + + + + + ++ + +QA + +
Sbjct: 70 QESSAKRSDEQRKMKEQQAAEELREKQAAEQERLKQLEKERLAAQEQKKQAEEAAKQAE 128
>gi|281177882|dbj|BAI54212.1| TolA protein [Escherichia coli SE15]
Length = 436
Score = 37.2 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 15/119 (12%), Positives = 45/119 (37%), Gaps = 3/119 (2%)
Query: 2 RLENGLAISMILHVMFLLLLYF-NFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP 60
+L+ + IS +LHV+ L + +F+ + S+D + + + K +
Sbjct: 10 KLKRAIIISAVLHVILFAALIWSSFDENIEASAGGGGGSSIDAVMVDSGAVVEQYKRMQS 69
Query: 61 VVQFKGS--SQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLR 117
Q + + +E ++ + + + + + ++ + +QA + +
Sbjct: 70 QESSAKRSDEQRKMKEQQAAEELREKQAAEQERLKQLEKERLAAQEQKKQAEEAAKQAE 128
>gi|260866870|ref|YP_003233272.1| membrane anchored protein TolA in TolA-TolQ-TolR complex
[Escherichia coli O111:H- str. 11128]
gi|257763226|dbj|BAI34721.1| membrane anchored protein TolA in TolA-TolQ-TolR complex
[Escherichia coli O111:H- str. 11128]
gi|323180021|gb|EFZ65577.1| protein TolA [Escherichia coli 1180]
Length = 406
Score = 37.2 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 15/119 (12%), Positives = 45/119 (37%), Gaps = 3/119 (2%)
Query: 2 RLENGLAISMILHVMFLLLLYF-NFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP 60
+L+ + IS +LHV+ L + +F+ + S+D + + + K +
Sbjct: 10 KLKRAIIISAVLHVILFAALIWSSFDENIEASAGGGGGSSIDAVMVDSGAVVEQYKRMQS 69
Query: 61 VVQFKGS--SQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLR 117
Q + + +E ++ + + + + + ++ + +QA + +
Sbjct: 70 QESSAKRSDEQRKMKEQQAAEELREKQAAEQERLKQLEKERLAAQEQKKQAEEAAKQAE 128
>gi|256021186|ref|ZP_05435051.1| cell envelope integrity inner membrane protein TolA [Shigella sp.
D9]
gi|332282412|ref|ZP_08394825.1| membrane spanning protein TolA [Shigella sp. D9]
gi|332104764|gb|EGJ08110.1| membrane spanning protein TolA [Shigella sp. D9]
Length = 437
Score = 37.2 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 15/119 (12%), Positives = 45/119 (37%), Gaps = 3/119 (2%)
Query: 2 RLENGLAISMILHVMFLLLLYF-NFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP 60
+L+ + IS +LHV+ L + +F+ + S+D + + + K +
Sbjct: 10 KLKRAIIISAVLHVILFAALIWSSFDENIEASAGGGGGSSIDAVMVDSGAVVEQYKRMQS 69
Query: 61 VVQFKGS--SQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLR 117
Q + + +E ++ + + + + + ++ + +QA + +
Sbjct: 70 QESSAKRSDEQRKMKEQQAAEELREKQAAEQERLKQLEKERLAAQEQKKQAEEAAKQAE 128
>gi|256081064|ref|XP_002576794.1| surface protein PspC [Schistosoma mansoni]
gi|238662077|emb|CAZ33031.1| surface protein PspC , putative [Schistosoma mansoni]
Length = 729
Score = 37.2 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 12/169 (7%), Positives = 42/169 (24%), Gaps = 1/169 (0%)
Query: 39 LSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENET 98
+SV + + +S K + + T +
Sbjct: 411 VSVKKVPAQKDANSTSKPTASKPRHQTPPPPSQPTLTQQPPKLEPKVEKSTPQPIEKKVI 470
Query: 99 KRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFA-EKKSIDTVVVRPD 157
+ + + S Q I++ ++ + + + +
Sbjct: 471 RPKKPEMLTEKQPVKENKQPVGSVTQSQPITETQLSTKEAEPQTPKMVAEPQTLETEKQK 530
Query: 158 KKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKM 206
+ ++K + ++ + ++ P +KL ++
Sbjct: 531 TPKEVAKPQTPKTEKPEAPKETVKLQTPETGEPQTPKGATNPQKLEAEI 579
>gi|218704066|ref|YP_002411585.1| cell envelope integrity inner membrane protein TolA [Escherichia
coli UMN026]
gi|293403994|ref|ZP_06647988.1| tolA [Escherichia coli FVEC1412]
gi|298379774|ref|ZP_06989379.1| tolA [Escherichia coli FVEC1302]
gi|300900746|ref|ZP_07118895.1| protein TolA [Escherichia coli MS 198-1]
gi|218431163|emb|CAR12039.1| membrane anchored protein in TolA-TolQ-TolR complex [Escherichia
coli UMN026]
gi|291428580|gb|EFF01605.1| tolA [Escherichia coli FVEC1412]
gi|298279472|gb|EFI20980.1| tolA [Escherichia coli FVEC1302]
gi|300355805|gb|EFJ71675.1| protein TolA [Escherichia coli MS 198-1]
Length = 421
Score = 37.2 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 15/119 (12%), Positives = 45/119 (37%), Gaps = 3/119 (2%)
Query: 2 RLENGLAISMILHVMFLLLLYF-NFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP 60
+L+ + IS +LHV+ L + +F+ + S+D + + + K +
Sbjct: 10 KLKRAIIISAVLHVILFAALIWSSFDENIEASAGGGGGSSIDAVMVDSGAVVEQYKRMQS 69
Query: 61 VVQFKGS--SQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLR 117
Q + + +E ++ + + + + + ++ + +QA + +
Sbjct: 70 QESSAKRSDEQRKMKEQQAAEELREKQAAEQERLKQLEKERLAAQEQKKQAEEAAKQAE 128
>gi|215485761|ref|YP_002328192.1| cell envelope integrity inner membrane protein TolA [Escherichia
coli O127:H6 str. E2348/69]
gi|215263833|emb|CAS08171.1| membrane anchored protein TolA in TolA-TolQ-TolR complex
[Escherichia coli O127:H6 str. E2348/69]
Length = 400
Score = 37.2 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 15/119 (12%), Positives = 45/119 (37%), Gaps = 3/119 (2%)
Query: 2 RLENGLAISMILHVMFLLLLYF-NFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP 60
+L+ + IS +LHV+ L + +F+ + S+D + + + K +
Sbjct: 10 KLKRAIIISAVLHVILFAALIWSSFDENIEASAGGGGGSSIDAVMVDSGAVVEQYKRMQS 69
Query: 61 VVQFKGS--SQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLR 117
Q + + +E ++ + + + + + ++ + +QA + +
Sbjct: 70 QESSAKRSDEQRKMKEQQAAEELREKQAAEQERLKQLEKERLAAQEQKKQAEEAAKQAE 128
>gi|170684137|ref|YP_001742850.1| cell envelope integrity inner membrane protein TolA [Escherichia
coli SMS-3-5]
gi|170521855|gb|ACB20033.1| protein TolA [Escherichia coli SMS-3-5]
Length = 426
Score = 37.2 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 15/119 (12%), Positives = 45/119 (37%), Gaps = 3/119 (2%)
Query: 2 RLENGLAISMILHVMFLLLLYF-NFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP 60
+L+ + IS +LHV+ L + +F+ + S+D + + + K +
Sbjct: 10 KLKRAIIISAVLHVILFAALIWSSFDENIEASAGGGGGSSIDAVMVDSGAVVEQYKRMQS 69
Query: 61 VVQFKGS--SQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLR 117
Q + + +E ++ + + + + + ++ + +QA + +
Sbjct: 70 QESSAKRSDEQRKMKEQQAAEELREKQAAEQERLKQLEKERLAAQEQKKQAEEAAKQAE 128
>gi|157158717|ref|YP_001461900.1| cell envelope integrity inner membrane protein TolA [Escherichia
coli E24377A]
gi|300926143|ref|ZP_07141956.1| protein TolA [Escherichia coli MS 182-1]
gi|301327932|ref|ZP_07221103.1| protein TolA [Escherichia coli MS 78-1]
gi|331672261|ref|ZP_08373052.1| protein TolA [Escherichia coli TA280]
gi|157080747|gb|ABV20455.1| protein TolA [Escherichia coli E24377A]
gi|300417842|gb|EFK01153.1| protein TolA [Escherichia coli MS 182-1]
gi|300845575|gb|EFK73335.1| protein TolA [Escherichia coli MS 78-1]
gi|331070456|gb|EGI41820.1| protein TolA [Escherichia coli TA280]
Length = 432
Score = 37.2 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 15/119 (12%), Positives = 45/119 (37%), Gaps = 3/119 (2%)
Query: 2 RLENGLAISMILHVMFLLLLYF-NFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP 60
+L+ + IS +LHV+ L + +F+ + S+D + + + K +
Sbjct: 10 KLKRAIIISAVLHVILFAALIWSSFDENIEASAGGGGGSSIDAVMVDSGAVVEQYKRMQS 69
Query: 61 VVQFKGS--SQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLR 117
Q + + +E ++ + + + + + ++ + +QA + +
Sbjct: 70 QESSAKRSDEQRKMKEQQAAEELREKQAAEQERLKQLEKERLAAQEQKKQAEEAAKQAE 128
>gi|170020916|ref|YP_001725870.1| cell envelope integrity inner membrane protein TolA [Escherichia
coli ATCC 8739]
gi|169755844|gb|ACA78543.1| protein TolA [Escherichia coli ATCC 8739]
gi|323942962|gb|EGB39126.1| TolA protein [Escherichia coli E482]
Length = 423
Score = 37.2 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 15/119 (12%), Positives = 45/119 (37%), Gaps = 3/119 (2%)
Query: 2 RLENGLAISMILHVMFLLLLYF-NFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP 60
+L+ + IS +LHV+ L + +F+ + S+D + + + K +
Sbjct: 10 KLKRAIIISAVLHVILFAALIWSSFDENIEASAGGGGGSSIDAVMVDSGAVVEQYKRMQS 69
Query: 61 VVQFKGS--SQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLR 117
Q + + +E ++ + + + + + ++ + +QA + +
Sbjct: 70 QESSAKRSDEQRKMKEQQAAEELREKQAAEQERLKQLEKERLAAQEQKKQAEEAAKQAE 128
>gi|91209773|ref|YP_539759.1| cell envelope integrity inner membrane protein TolA [Escherichia
coli UTI89]
gi|117622930|ref|YP_851843.1| cell envelope integrity inner membrane protein TolA [Escherichia
coli APEC O1]
gi|218557652|ref|YP_002390565.1| cell envelope integrity inner membrane protein TolA [Escherichia
coli S88]
gi|237707298|ref|ZP_04537779.1| membrane spanning protein TolA [Escherichia sp. 3_2_53FAA]
gi|91071347|gb|ABE06228.1| membrane spanning protein TolA [Escherichia coli UTI89]
gi|115512054|gb|ABJ00129.1| membrane spanning protein TolA [Escherichia coli APEC O1]
gi|218364421|emb|CAR02101.1| membrane anchored protein in TolA-TolQ-TolR complex [Escherichia
coli S88]
gi|226898508|gb|EEH84767.1| membrane spanning protein TolA [Escherichia sp. 3_2_53FAA]
gi|294491636|gb|ADE90392.1| protein TolA [Escherichia coli IHE3034]
gi|307627847|gb|ADN72151.1| cell envelope integrity inner membrane protein TolA [Escherichia
coli UM146]
gi|315287146|gb|EFU46558.1| protein TolA [Escherichia coli MS 110-3]
gi|323953135|gb|EGB49002.1| TolA protein [Escherichia coli H252]
Length = 416
Score = 37.2 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 15/119 (12%), Positives = 45/119 (37%), Gaps = 3/119 (2%)
Query: 2 RLENGLAISMILHVMFLLLLYF-NFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP 60
+L+ + IS +LHV+ L + +F+ + S+D + + + K +
Sbjct: 10 KLKRAIIISAVLHVILFAALIWSSFDENIEASAGGGGGSSIDAVMVDSGAVVEQYKRMQS 69
Query: 61 VVQFKGS--SQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLR 117
Q + + +E ++ + + + + + ++ + +QA + +
Sbjct: 70 QESSAKRSDEQRKMKEQQAAEELREKQAAEQERLKQLEKERLAAQEQKKQAEEAAKQAE 128
>gi|91206080|ref|YP_538435.1| VirB6 [Rickettsia bellii RML369-C]
gi|119367896|sp|Q1RH18|Y1265_RICBR RecName: Full=Uncharacterized protein RBE_1265; Flags: Precursor
gi|91069624|gb|ABE05346.1| VirB6 [Rickettsia bellii RML369-C]
Length = 1039
Score = 37.2 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 22/177 (12%), Positives = 44/177 (24%), Gaps = 7/177 (3%)
Query: 61 VVQFKGSSQENLVRDFS----VQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALL 116
SQ V E + + + E++ + SS + A+
Sbjct: 863 KPIEAPVSQPTTVSTQIDTAIKTEPPKVSAAEVVRNTAEDKLEDLSSKLNVTKEIKEAVP 922
Query: 117 RMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQ 176
+ ++ T E +L + + K E + +
Sbjct: 923 ESQKEEPKEPRVKHTTEVEPELNLDENLGVTRTIRGLDKDRKFTEQESHELKIGEAGYVK 982
Query: 177 DAI--AIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLG-KINVDVVGGTEL 230
+ A +R+R A + R R K G + +D
Sbjct: 983 QEMRNAQIRDRRAAFEKETEELYRSVGGRAKDKATERNDGTIENRSKKIDSGSDENP 1039
>gi|26246708|ref|NP_752748.1| cell envelope integrity inner membrane protein TolA [Escherichia
coli CFT073]
gi|218688530|ref|YP_002396742.1| cell envelope integrity inner membrane protein TolA [Escherichia
coli ED1a]
gi|227884294|ref|ZP_04002099.1| cell envelope integrity inner membrane protein TolA [Escherichia
coli 83972]
gi|300993165|ref|ZP_07180248.1| protein TolA [Escherichia coli MS 45-1]
gi|301051341|ref|ZP_07198164.1| protein TolA [Escherichia coli MS 185-1]
gi|26107107|gb|AAN79291.1|AE016757_195 TolA protein [Escherichia coli CFT073]
gi|218426094|emb|CAR06912.1| membrane anchored protein in TolA-TolQ-TolR complex [Escherichia
coli ED1a]
gi|222032475|emb|CAP75214.1| Protein tolA [Escherichia coli LF82]
gi|227839046|gb|EEJ49512.1| cell envelope integrity inner membrane protein TolA [Escherichia
coli 83972]
gi|300297003|gb|EFJ53388.1| protein TolA [Escherichia coli MS 185-1]
gi|300406695|gb|EFJ90233.1| protein TolA [Escherichia coli MS 45-1]
gi|307552590|gb|ADN45365.1| membrane spanning protein TolA [Escherichia coli ABU 83972]
gi|312945263|gb|ADR26090.1| cell envelope integrity inner membrane protein TolA [Escherichia
coli O83:H1 str. NRG 857C]
gi|315292653|gb|EFU52005.1| protein TolA [Escherichia coli MS 153-1]
gi|315299258|gb|EFU58510.1| protein TolA [Escherichia coli MS 16-3]
gi|324009567|gb|EGB78786.1| protein TolA [Escherichia coli MS 57-2]
Length = 421
Score = 37.2 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 15/119 (12%), Positives = 45/119 (37%), Gaps = 3/119 (2%)
Query: 2 RLENGLAISMILHVMFLLLLYF-NFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP 60
+L+ + IS +LHV+ L + +F+ + S+D + + + K +
Sbjct: 10 KLKRAIIISAVLHVILFAALIWSSFDENIEASAGGGGGSSIDAVMVDSGAVVEQYKRMQS 69
Query: 61 VVQFKGS--SQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLR 117
Q + + +E ++ + + + + + ++ + +QA + +
Sbjct: 70 QESSAKRSDEQRKMKEQQAAEELREKQAAEQERLKQLEKERLAAQEQKKQAEEAAKQAE 128
>gi|16128714|ref|NP_415267.1| membrane anchored protein in TolA-TolQ-TolR complex [Escherichia
coli str. K-12 substr. MG1655]
gi|89107597|ref|AP_001377.1| membrane anchored protein in TolA-TolQ-TolR complex [Escherichia
coli str. K-12 substr. W3110]
gi|157160222|ref|YP_001457540.1| cell envelope integrity inner membrane protein TolA [Escherichia
coli HS]
gi|170080406|ref|YP_001729726.1| membrane anchored protein in TolA-TolQ-TolR complex [Escherichia
coli str. K-12 substr. DH10B]
gi|188496041|ref|ZP_03003311.1| protein TolA [Escherichia coli 53638]
gi|209917990|ref|YP_002292074.1| cell envelope integrity inner membrane protein TolA [Escherichia
coli SE11]
gi|218553266|ref|YP_002386179.1| cell envelope integrity inner membrane protein TolA [Escherichia
coli IAI1]
gi|218694163|ref|YP_002401830.1| cell envelope integrity inner membrane protein TolA [Escherichia
coli 55989]
gi|238900004|ref|YP_002925800.1| membrane anchored protein in TolA-TolQ-TolR complex [Escherichia
coli BW2952]
gi|253774290|ref|YP_003037121.1| cell envelope integrity inner membrane protein TolA [Escherichia
coli 'BL21-Gold(DE3)pLysS AG']
gi|254160809|ref|YP_003043917.1| cell envelope integrity inner membrane protein TolA [Escherichia
coli B str. REL606]
gi|256023658|ref|ZP_05437523.1| cell envelope integrity inner membrane protein TolA [Escherichia
sp. 4_1_40B]
gi|260842945|ref|YP_003220723.1| membrane anchored protein TolA in TolA-TolQ-TolR complex
[Escherichia coli O103:H2 str. 12009]
gi|260853974|ref|YP_003227865.1| membrane anchored protein TolA in TolA-TolQ-TolR complex
[Escherichia coli O26:H11 str. 11368]
gi|293414024|ref|ZP_06656673.1| TolA protein [Escherichia coli B185]
gi|300822972|ref|ZP_07103107.1| protein TolA [Escherichia coli MS 119-7]
gi|300906998|ref|ZP_07124667.1| protein TolA [Escherichia coli MS 84-1]
gi|300918400|ref|ZP_07135000.1| protein TolA [Escherichia coli MS 115-1]
gi|300929455|ref|ZP_07144923.1| protein TolA [Escherichia coli MS 187-1]
gi|300947180|ref|ZP_07161390.1| protein TolA [Escherichia coli MS 116-1]
gi|300957688|ref|ZP_07169877.1| protein TolA [Escherichia coli MS 175-1]
gi|301027079|ref|ZP_07190451.1| protein TolA [Escherichia coli MS 196-1]
gi|301305227|ref|ZP_07211325.1| protein TolA [Escherichia coli MS 124-1]
gi|301648044|ref|ZP_07247811.1| protein TolA [Escherichia coli MS 146-1]
gi|307137352|ref|ZP_07496708.1| cell envelope integrity inner membrane protein TolA [Escherichia
coli H736]
gi|307314796|ref|ZP_07594390.1| protein TolA [Escherichia coli W]
gi|309797454|ref|ZP_07691846.1| protein TolA [Escherichia coli MS 145-7]
gi|312970818|ref|ZP_07784997.1| protein TolA [Escherichia coli 1827-70]
gi|331641240|ref|ZP_08342375.1| protein TolA [Escherichia coli H736]
gi|331662099|ref|ZP_08363022.1| protein TolA [Escherichia coli TA143]
gi|331676421|ref|ZP_08377118.1| protein TolA [Escherichia coli H591]
gi|135978|sp|P19934|TOLA_ECOLI RecName: Full=Protein tolA
gi|148019|gb|AAA24683.1| tolA [Escherichia coli]
gi|1651331|dbj|BAA35405.1| membrane anchored protein in TolA-TolQ-TolR complex [Escherichia
coli str. K12 substr. W3110]
gi|1786960|gb|AAC73833.1| membrane anchored protein in TolA-TolQ-TolR complex [Escherichia
coli str. K-12 substr. MG1655]
gi|157065902|gb|ABV05157.1| protein TolA [Escherichia coli HS]
gi|169888241|gb|ACB01948.1| membrane anchored protein in TolA-TolQ-TolR complex [Escherichia
coli str. K-12 substr. DH10B]
gi|188491240|gb|EDU66343.1| protein TolA [Escherichia coli 53638]
gi|209911249|dbj|BAG76323.1| TolA protein [Escherichia coli SE11]
gi|218350895|emb|CAU96593.1| membrane anchored protein in TolA-TolQ-TolR complex [Escherichia
coli 55989]
gi|218360034|emb|CAQ97581.1| membrane anchored protein in TolA-TolQ-TolR complex [Escherichia
coli IAI1]
gi|238861733|gb|ACR63731.1| membrane anchored protein in TolA-TolQ-TolR complex [Escherichia
coli BW2952]
gi|242376501|emb|CAQ31205.1| tolA, subunit of The Tol-Pal Cell Envelope Complex, Colicin S4
Transport System and The Colicin A Import System
[Escherichia coli BL21(DE3)]
gi|253325334|gb|ACT29936.1| protein TolA [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
gi|253972710|gb|ACT38381.1| cell envelope integrity inner membrane protein TolA [Escherichia
coli B str. REL606]
gi|253976904|gb|ACT42574.1| cell envelope integrity inner membrane protein TolA [Escherichia
coli BL21(DE3)]
gi|257752623|dbj|BAI24125.1| membrane anchored protein TolA in TolA-TolQ-TolR complex
[Escherichia coli O26:H11 str. 11368]
gi|257758092|dbj|BAI29589.1| membrane anchored protein TolA in TolA-TolQ-TolR complex
[Escherichia coli O103:H2 str. 12009]
gi|260450107|gb|ACX40529.1| protein TolA [Escherichia coli DH1]
gi|284920526|emb|CBG33588.1| colicin import protein [Escherichia coli 042]
gi|291434082|gb|EFF07055.1| TolA protein [Escherichia coli B185]
gi|299879413|gb|EFI87624.1| protein TolA [Escherichia coli MS 196-1]
gi|300315606|gb|EFJ65390.1| protein TolA [Escherichia coli MS 175-1]
gi|300401219|gb|EFJ84757.1| protein TolA [Escherichia coli MS 84-1]
gi|300414463|gb|EFJ97773.1| protein TolA [Escherichia coli MS 115-1]
gi|300453166|gb|EFK16786.1| protein TolA [Escherichia coli MS 116-1]
gi|300462564|gb|EFK26057.1| protein TolA [Escherichia coli MS 187-1]
gi|300524513|gb|EFK45582.1| protein TolA [Escherichia coli MS 119-7]
gi|300839539|gb|EFK67299.1| protein TolA [Escherichia coli MS 124-1]
gi|301073870|gb|EFK88676.1| protein TolA [Escherichia coli MS 146-1]
gi|306905694|gb|EFN36222.1| protein TolA [Escherichia coli W]
gi|308118978|gb|EFO56240.1| protein TolA [Escherichia coli MS 145-7]
gi|310336579|gb|EFQ01746.1| protein TolA [Escherichia coli 1827-70]
gi|315059982|gb|ADT74309.1| membrane anchored protein in TolA-TolQ-TolR complex [Escherichia
coli W]
gi|315135396|dbj|BAJ42555.1| cell envelope integrity inner membrane proteinTolA [Escherichia
coli DH1]
gi|315257658|gb|EFU37626.1| protein TolA [Escherichia coli MS 85-1]
gi|320198141|gb|EFW72745.1| TolA protein [Escherichia coli EC4100B]
gi|323153745|gb|EFZ39992.1| protein TolA [Escherichia coli EPECa14]
gi|323158791|gb|EFZ44804.1| protein TolA [Escherichia coli E128010]
gi|323379458|gb|ADX51726.1| protein TolA [Escherichia coli KO11]
gi|323938278|gb|EGB34536.1| TolA protein [Escherichia coli E1520]
gi|323976280|gb|EGB71370.1| TolA protein [Escherichia coli TW10509]
gi|324020353|gb|EGB89572.1| protein TolA [Escherichia coli MS 117-3]
gi|324116281|gb|EGC10202.1| TolA protein [Escherichia coli E1167]
gi|331038038|gb|EGI10258.1| protein TolA [Escherichia coli H736]
gi|331060521|gb|EGI32485.1| protein TolA [Escherichia coli TA143]
gi|331075914|gb|EGI47211.1| protein TolA [Escherichia coli H591]
gi|332342076|gb|AEE55410.1| colicin import membrane protein TolA [Escherichia coli UMNK88]
Length = 421
Score = 37.2 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 15/119 (12%), Positives = 45/119 (37%), Gaps = 3/119 (2%)
Query: 2 RLENGLAISMILHVMFLLLLYF-NFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP 60
+L+ + IS +LHV+ L + +F+ + S+D + + + K +
Sbjct: 10 KLKRAIIISAVLHVILFAALIWSSFDENIEASAGGGGGSSIDAVMVDSGAVVEQYKRMQS 69
Query: 61 VVQFKGS--SQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLR 117
Q + + +E ++ + + + + + ++ + +QA + +
Sbjct: 70 QESSAKRSDEQRKMKEQQAAEELREKQAAEQERLKQLEKERLAAQEQKKQAEEAAKQAE 128
>gi|187732995|ref|YP_001879396.1| cell envelope integrity inner membrane protein TolA [Shigella
boydii CDC 3083-94]
gi|187429987|gb|ACD09261.1| protein TolA [Shigella boydii CDC 3083-94]
Length = 395
Score = 37.2 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 15/119 (12%), Positives = 45/119 (37%), Gaps = 3/119 (2%)
Query: 2 RLENGLAISMILHVMFLLLLYF-NFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP 60
+L+ + IS +LHV+ L + +F+ + S+D + + + K +
Sbjct: 10 KLKRAIIISAVLHVILFAALIWSSFDENIEASAGGGGGSSIDAVMVDSGAVVEQYKRMQS 69
Query: 61 VVQFKGS--SQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLR 117
Q + + +E ++ + + + + + ++ + +QA + +
Sbjct: 70 QESSAKRSDEQRKMKEQQAAEELREKQAAEQERLKQLEKERLAAQEQKKQAEEAAKQAE 128
>gi|255011372|ref|ZP_05283498.1| putative TonB exported protein [Bacteroides fragilis 3_1_12]
gi|313149187|ref|ZP_07811380.1| predicted protein [Bacteroides fragilis 3_1_12]
gi|313137954|gb|EFR55314.1| predicted protein [Bacteroides fragilis 3_1_12]
Length = 280
Score = 37.2 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 30/253 (11%), Positives = 67/253 (26%), Gaps = 25/253 (9%)
Query: 1 MRLEN-----GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYK 55
M ++ G ++++HV + LL + + P + V + + Y
Sbjct: 1 MNIKRKSEYIGALGALLVHVAIIALLIL-VSFAVPRPDEEAGGVPVMMGDVD----AAYG 55
Query: 56 KIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESAL 115
+ + E + V E T+T K + K E+ E
Sbjct: 56 NYDPSTMVDVEVMPEEVPAPQPVPEVEAEQEMITQTEEETVAIKPKAEPKKEKPKVEKKP 115
Query: 116 LRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRK--RI 173
+ + K E++ + + A K + + + S
Sbjct: 116 EKTAEEKAAEAKKLAEERAERERKAAAEAASKRVAGAFGKGSQMGGSKGSATSGEGVEGS 175
Query: 174 PSQDAIAIVRNRVIANWNIPSDFKRF-------------KKLRVKMHFQLNQKGFVLGKI 220
+ ++ V + ++ RV + +N G V+
Sbjct: 176 KDGNLSTGAKSGVGGYGTFNLGGRSIGEGGLPRPVYNVQEEGRVVVSITVNPAGHVIATS 235
Query: 221 NVDVVGGTELVRR 233
+ R
Sbjct: 236 INRLTNTVNSTLR 248
>gi|241022831|ref|XP_002406030.1| conserved hypothetical protein [Ixodes scapularis]
gi|215491857|gb|EEC01498.1| conserved hypothetical protein [Ixodes scapularis]
Length = 1255
Score = 37.2 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 9/170 (5%), Positives = 33/170 (19%), Gaps = 30/170 (17%)
Query: 13 LHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYH---------------------- 50
+H L + P + +
Sbjct: 222 VHGRPLRTTLLSSLKPRTEPPPVIKPTEPKAEPVAEPTPEPTAEPTPEPAPEPSPEPAAE 281
Query: 51 -------SSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQ-TKTHATENETKRSS 102
+ EPV++ + + + + + + + +
Sbjct: 282 PSPEPSSEPTPEPSAEPVLEPSAKPTPEPSAEPAPEPSAEPVPEPSAEPVPEPSAEPAPQ 341
Query: 103 SSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTV 152
S + ++ + + SK + + ++
Sbjct: 342 PSAEPAPEPSAEPAPKTLAEFQAKPTSKPNPEPSPEPHAPSEHTQKPESE 391
>gi|153008587|ref|YP_001369802.1| TonB family protein [Ochrobactrum anthropi ATCC 49188]
gi|151560475|gb|ABS13973.1| TonB family protein [Ochrobactrum anthropi ATCC 49188]
Length = 325
Score = 37.2 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 25/169 (14%), Positives = 47/169 (27%), Gaps = 12/169 (7%)
Query: 84 RFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISF 143
+ ++ E E + + + + P K+ K + +
Sbjct: 133 QEPEEVIPDVVEAEKPEVAVPLPVEKPEVKPEPKPEPKPEPKKVEKPKPEKPKQPKVEKP 192
Query: 144 AEKKSIDTVVVRPDKKELLSKVEKSSRKRI-----------PSQDAIAIVRNRVIANWNI 192
KK+ R + S A + + N
Sbjct: 193 KPKKAEKAPETRQAAAPRMDADAGEKAAANRRGENSASAGVASNKWQAKMNAHMARNTRF 252
Query: 193 PSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARK 241
R K RV ++F ++ G VL G +E+ + L E AR+
Sbjct: 253 MQRKARNAKGRVVINFVIDPSGNVLSVKLAGSSGNSEVDQLAL-EAARR 300
>gi|146310895|ref|YP_001175969.1| cell envelope integrity inner membrane protein TolA [Enterobacter
sp. 638]
gi|145317771|gb|ABP59918.1| Cell division and transport-associated protein TolA [Enterobacter
sp. 638]
Length = 406
Score = 37.2 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 16/119 (13%), Positives = 38/119 (31%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPV 61
+L+ + IS +LHV+ L ++ + + + S + D + E
Sbjct: 10 KLKRAIIISAVLHVILFAALIWSSFDEHIDAAAGGGGGSSIDAVMVDPGAVVQNYNREQQ 69
Query: 62 VQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPV 120
Q E + Q+ + Q + ++ E A +++ +
Sbjct: 70 QQASAKRAEEQRDKQAQQQAEELREKQAAEQERLKQLEKERLQAQEAAKEQADQQKQAE 128
>gi|110640947|ref|YP_668675.1| cell envelope integrity inner membrane protein TolA [Escherichia
coli 536]
gi|300992346|ref|ZP_07179869.1| protein TolA [Escherichia coli MS 200-1]
gi|110342539|gb|ABG68776.1| TolA colicin import membrane protein [Escherichia coli 536]
gi|300305363|gb|EFJ59883.1| protein TolA [Escherichia coli MS 200-1]
gi|324010462|gb|EGB79681.1| protein TolA [Escherichia coli MS 60-1]
Length = 421
Score = 37.2 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 15/119 (12%), Positives = 44/119 (36%), Gaps = 3/119 (2%)
Query: 2 RLENGLAISMILHVMFLLLLYF-NFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP 60
+L+ + IS +LHV+ L + +F+ + S+D + + + K +
Sbjct: 10 KLKRAIIISAVLHVILFAALIWSSFDENIEASAGGGGGSSIDAVMVDSGAVVEQYKRMQS 69
Query: 61 VVQFKGS--SQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLR 117
Q + + +E ++ + + + + + ++ + QA + +
Sbjct: 70 QESSAKRSDEQRKMKEQQAAEELREKQAAEQERLKQLEKERLAAQEQKNQAEEAAKQAE 128
>gi|197123029|ref|YP_002134980.1| TonB family protein [Anaeromyxobacter sp. K]
gi|196172878|gb|ACG73851.1| TonB family protein [Anaeromyxobacter sp. K]
Length = 419
Score = 37.2 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 19/219 (8%), Positives = 49/219 (22%), Gaps = 16/219 (7%)
Query: 48 DYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGE 107
+ + P + + + E + +
Sbjct: 167 EAGENGQAAKSTPGKEGPSAPHGTGGEKLVIPEQRAQERLAVAPRPDAPGAGDVPVAPRT 226
Query: 108 QALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEK 167
+ S P D + + + + PD+ + + + +
Sbjct: 227 DQQRLSGGGPALQVPGGAGAQGGGRKSGIDRRLLPDPQNLARIAGGPSPDRLDGVEEGDS 286
Query: 168 SSRKRI--PSQDAIAIVRNRVIANW--NIPSDFKR-------FKKLRVKMHFQLNQKGFV 216
++ I V + W N + + + L+ G +
Sbjct: 287 TALNTRSFKYATFINRVGMAIYREWDPNRAYQARDPEGKVYPARDRTTSIELVLDGSGAI 346
Query: 217 LGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPST 255
+D G L + +A + F P+
Sbjct: 347 RFVKLLDSSG-----LDFLDQEVVRAARAAGPFPNPPAG 380
>gi|464309|sp|Q02937|OMLA_ACTPL RecName: Full=Outer membrane lipoprotein A; Flags: Precursor
gi|141838|gb|AAC41456.1| lipoprotein [Actinobacillus pleuropneumoniae serovar 1]
Length = 365
Score = 37.2 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 17/141 (12%), Positives = 41/141 (29%), Gaps = 7/141 (4%)
Query: 1 MRLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP 60
M + L S++ V+ + P S + D + K ++ ++
Sbjct: 1 MNIATKLMASLVASVVLTACSGGGSSGSSSKPNS-------ELTPKVDMSAPKAEQPKKE 53
Query: 61 VVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPV 120
V +S+ ++ + Q + + + K + +
Sbjct: 54 EVPQADNSKAEEPKEMAPQVDSPKAEEPKNMAPQMGNPKLNDPQVMAPKMDNPQKDAPKG 113
Query: 121 SPYDKQKISKATNKEQDLQGI 141
K K + KE ++ I
Sbjct: 114 EELSKDKSNAEILKELGVKDI 134
>gi|227355640|ref|ZP_03840034.1| TonB protein [Proteus mirabilis ATCC 29906]
gi|227164247|gb|EEI49140.1| TonB protein [Proteus mirabilis ATCC 29906]
Length = 239
Score = 37.2 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 25/245 (10%), Positives = 56/245 (22%), Gaps = 31/245 (12%)
Query: 1 MRLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP 60
MR + + IS+ LH + V PI+ + + D + + + E
Sbjct: 1 MRFKLWVFISLCLHASLVAAAILY--VVEDKPIAPEPISIQMLAFAADEPVGEPEPVVEE 58
Query: 61 VVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPV 120
V + + + D K + E K + + P+
Sbjct: 59 VTPPEPEPVVEPEPEPEPEPIPDVKPVIEKPIEKKPEPKPKPKPVEKPKPPVERPQQQPL 118
Query: 121 SPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIA 180
+ ++ + L + +
Sbjct: 119 ALNKGNEMKNLNPNATPSNKGEEKPVATTSQGE-GKVPNVLRQGLPIYPPRAKAVGIE-- 175
Query: 181 IVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENAR 240
+K+ F ++ G V + + R
Sbjct: 176 ---------------------GSIKVRFDIDADGRVDNVEILSANPKN-----VFEREVR 209
Query: 241 KAVIK 245
KA+ +
Sbjct: 210 KAMRQ 214
>gi|62180303|ref|YP_216720.1| transport protein TonB [Salmonella enterica subsp. enterica serovar
Choleraesuis str. SC-B67]
gi|62127936|gb|AAX65639.1| energy transducer; uptake of iron, cyanocobalimin; sensitivity to
phages, colicins [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|322714777|gb|EFZ06348.1| transport protein TonB [Salmonella enterica subsp. enterica serovar
Choleraesuis str. A50]
Length = 281
Score = 37.2 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 23/228 (10%), Positives = 57/228 (25%), Gaps = 19/228 (8%)
Query: 8 AISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKK----------- 56
+S+ +H + L + Q++ + + ++V + D + +
Sbjct: 55 LLSVGIHGAVVAGLLYTSVHQVIELPAPAQPITVTMVSPADLEPPQAVQPPPEPVVEPEP 114
Query: 57 ---IEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKES 113
+ E + + E + + +
Sbjct: 115 EPEPILEPPKEAPVVIEKPKPKPKPKPKPKPVKKVEEQPKREVKPAAPRPASPFENSAPV 174
Query: 114 ALLRMPVSPYDKQKISKAT-NKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKR 172
S K +S T + + + + R K ++ + +
Sbjct: 175 RPTSSTASATSKPAVSVPTGPRALSRNQPQYPARAQALRIEGRVKVKFDVTSAGRVENVQ 234
Query: 173 IPSQDAIAIVRNRVI---ANWNIPSDFKRFKKLRVKMHFQLNQKGFVL 217
I S + V W + L V + F+LN +
Sbjct: 235 ILSAQPANMFEREVKNAMRKWRYEAGKPGS-GLVVNIIFRLNGTAQIE 281
>gi|20092769|ref|NP_618844.1| type IV secretion system protein [Methanosarcina acetivorans C2A]
gi|19918064|gb|AAM07324.1| type IV secretion system protein [Methanosarcina acetivorans C2A]
Length = 864
Score = 37.2 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 21/175 (12%), Positives = 45/175 (25%), Gaps = 7/175 (4%)
Query: 27 VQLLVPISRREMLS---VDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGD 83
P E + V+ I + E KG+ E V + +
Sbjct: 213 ALEPKPSVSPETVPEKKVELIPETEKKGI--FPPEIGTQDQKGADHEGRVEELKSKRETR 270
Query: 84 RFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKIS--KATNKEQDLQGI 141
+ + +++ K L L +S + + K +++
Sbjct: 271 EDKKTRSSGKIKKAPQKAKIKKKSGFLGNMKDLSRDISGIKEGEKLSDKLKEFFNEVKTP 330
Query: 142 SFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDF 196
A+KK + V D++ + + I + W
Sbjct: 331 EGAKKKFAEIVRGLKDEELRVLPPYDPETCGPLLEYEIPAGFTEIERYWVEEPYA 385
>gi|3915151|sp|P72204|TONB_PASHA RecName: Full=Protein tonB
gi|1575391|gb|AAB09530.1| TonB [Mannheimia haemolytica]
Length = 246
Score = 37.2 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 11/168 (6%), Positives = 45/168 (26%)
Query: 4 ENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQ 63
GL S+ +H + + + + + + + + +
Sbjct: 7 RIGLLASLAIHTALIGGTFAWLHNHKVKKLPSKTLFLWKWWQALLDEPQVAVAPDPITEE 66
Query: 64 FKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPY 123
K E + + + + K+ + ++ + +
Sbjct: 67 VKEIEPEKAEVPPEPKLTPEPTPEPDEFQILRLNPKKEKPKEEKRKERHHHKHKHRHKEK 126
Query: 124 DKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRK 171
++ + K++ + K K+ +++K ++ +
Sbjct: 127 REELQEQEKPKDKPKERPKHHHKHIKALDAGPEIKQGIVAKAIPNAAE 174
>gi|330941132|gb|EGH44012.1| TonB [Pseudomonas syringae pv. pisi str. 1704B]
Length = 248
Score = 37.2 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 20/200 (10%), Positives = 42/200 (21%), Gaps = 6/200 (3%)
Query: 56 KIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESAL 115
+PV + L Q E +
Sbjct: 33 PAPQPVELPPAAMMVELAPVPEPAPPPPPKVVQPPPPPAPEEPTPVPEVVQAPKPEIVVP 92
Query: 116 LRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPS 175
++ Q E + + + +P K S
Sbjct: 93 KKVEKPKPKPQPPKPQKKPEPPKEKPADEKPVDTPPTTAQPAKPVAPKPAPAPSPPSNAL 152
Query: 176 QDAIAIVRNRVIANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRM 234
+ + + P D +R + ++ F ++ G VL
Sbjct: 153 PNWQGDLLGHLSKYKKYPEDARRRGMQGVARLRFVVDADGNVLSYSI-----ANSSGSSS 207
Query: 235 LRENARKAVIKSQAFRLSPS 254
L + + ++Q P
Sbjct: 208 LDRATMEMIRRAQPLPKPPK 227
>gi|206976979|ref|ZP_03237880.1| S-layer domain protein [Bacillus cereus H3081.97]
gi|206744784|gb|EDZ56190.1| S-layer domain protein [Bacillus cereus H3081.97]
Length = 875
Score = 37.2 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 16/167 (9%), Positives = 43/167 (25%), Gaps = 15/167 (8%)
Query: 9 ISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSS 68
S+I L F E+ + + K
Sbjct: 5 YSVIAVASLLATNLLTFPSS-------------SLAEIENKTRNSIEAFSYIQSNEKSEL 51
Query: 69 QENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK--Q 126
Q+ L Q ++ + K K ++ LK+ ++ + +
Sbjct: 52 QQQLEAVKERQIELEKREEILKQQKELFVKVDELKRKKDELLKQDGEQKVQLEEVQQELD 111
Query: 127 KISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRI 173
++ K + ++ + + ++E+ K ++
Sbjct: 112 ELKKMQAEIEEQNQLQVRDNSEEKKTTELKKQEEIEEKNALEIKENN 158
>gi|297715088|ref|XP_002833929.1| PREDICTED: hypothetical protein LOC100440588 [Pongo abelii]
Length = 858
Score = 37.2 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 20/192 (10%), Positives = 61/192 (31%), Gaps = 7/192 (3%)
Query: 28 QLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLV--RDFSVQENGDRF 85
Q + EM ++ + ++ + + K QE + ++ ++E ++
Sbjct: 399 QEEKIREQEEMWRQKEKTHQQEEKIREQEEKMWRQEEKIREQEKKMWRQEEKIREQEEKM 458
Query: 86 SDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKIS-----KATNKEQDLQG 140
Q + E K + ++ +Q+ + + +
Sbjct: 459 GRQEDKIREQEEKMHEQEEKMWRQEEKMREQEKIREEEKRQEQEEKIWRQEEKTREQEKM 518
Query: 141 ISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFK 200
EK +R ++++ + EK + Q+ +R + W + +
Sbjct: 519 WRQKEKMHEQEEKIREQEEKMWRQEEKMGEQEEKMQEQEEKIRRQEEKMWEQEVKLRHQE 578
Query: 201 KLRVKMHFQLNQ 212
+ ++ +L +
Sbjct: 579 EKMQELEVRLQE 590
>gi|268317046|ref|YP_003290765.1| TonB family protein [Rhodothermus marinus DSM 4252]
gi|262334580|gb|ACY48377.1| TonB family protein [Rhodothermus marinus DSM 4252]
Length = 248
Score = 37.2 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 18/217 (8%), Positives = 57/217 (26%), Gaps = 27/217 (12%)
Query: 39 LSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENET 98
+ V+ + + + P E + + R + +T + E
Sbjct: 39 IEVELGPWAEGRPVQQSEQPRPNEAAPEPQPETPQEETAALPEKTRPVELPETPPVQEEE 98
Query: 99 KRSSS--SKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRP 156
+ + ++ + + P + + Q A + +
Sbjct: 99 RINEPEETRVAPEPQTNPAEVKKPEPDKAAQPVRPQGGGQAEGTAGAATGNEGEGQEDQR 158
Query: 157 DKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFV 216
L+ ++++ + A + +++ ++ +G V
Sbjct: 159 SAPYLIEGLDRTLVQAPLPVYAEKV-------------------NAIIRVRIVVDPQGRV 199
Query: 217 LGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSP 253
+ I + L +A+ + + L P
Sbjct: 200 VQAIPLIKGNP------ALERAVLEALRRWRFNPLPP 230
>gi|94421034|ref|NP_808489.4| E1A binding protein p300 [Mus musculus]
Length = 2412
Score = 37.2 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 25/167 (14%), Positives = 46/167 (27%), Gaps = 3/167 (1%)
Query: 28 QLLVPISRREMLS-VDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFS 86
P +M S ++ E + E K E R ++ +G
Sbjct: 967 PEKQPSQEVKMESKMEVDKPEPADAQPEDTKEAKGEDVKVEPTEMEERGPELKTDGKEEE 1026
Query: 87 DQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEK 146
+Q T AT++ S K +E MP ++ ++ Q +
Sbjct: 1027 EQPSTSATQSSPAPGQSKKKIFKPEELRQALMPTLEALYRQDPESLPFRQPVDPQLLGIP 1086
Query: 147 KSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIP 193
D V D + K++ + I + W
Sbjct: 1087 DYFDIVKSPMDLSTIKRKLDTGQYQEPW--QYIDDIWLMFNNAWLYN 1131
>gi|15614643|ref|NP_242946.1| cell wall-associated protease precursor [Bacillus halodurans C-125]
gi|10174699|dbj|BAB05799.1| cell wall-associated protease precursor [Bacillus halodurans C-125]
Length = 1052
Score = 37.2 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 23/185 (12%), Positives = 49/185 (26%), Gaps = 4/185 (2%)
Query: 50 HSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQA 109
+ E V+ + + V DR + + K +
Sbjct: 869 TAMDLGNKESKAVK-IKVIDKIPPKAPKVNSISDRTTTVKGETEPNATVTIKKNGKKLAS 927
Query: 110 LKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSS 169
K + + ++ +K + +D G P K + + +S
Sbjct: 928 GKADKNGKFSIKISKQKAGTKLSITAKDKAGNVSKATTKTVKDKTPPKKPTV---NKVTS 984
Query: 170 RKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTE 229
R + A + + + K K + + +KG L D G T
Sbjct: 985 RDTKVTGKTEANATVTIKRDGKTLASGKADKNGKFSIKISKQKKGTKLSVTAKDKAGNTS 1044
Query: 230 LVRRM 234
++
Sbjct: 1045 KATKV 1049
>gi|42491186|emb|CAD43041.1| TonB protein [Listonella anguillarum serovar O1]
Length = 240
Score = 37.2 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 21/168 (12%), Positives = 42/168 (25%), Gaps = 5/168 (2%)
Query: 78 VQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQD 137
Q +Q + ++ K + DK T Q
Sbjct: 51 AQPQAQVVQEQATKTPPPEKRANKPKPAKKEPQKVVQKKSLSKPVKDKPAPKIPTKSAQV 110
Query: 138 LQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFK 197
+ A S++ + + S P R K
Sbjct: 111 QTPVKEAVTSSVENENSAESTPKTAAAPSSSGATNQPKLVDAPSFVTRPAPPVYPRLAQK 170
Query: 198 RFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIK 245
R + L++ G + ++ + G +L E+A A+ +
Sbjct: 171 RGIEGVAMYEVWLDENGRQIKQVLLSSSGAA-----LLDESALNAIKQ 213
>gi|126339425|ref|XP_001370077.1| PREDICTED: similar to proline/serine-rich coiled-coil 2
[Monodelphis domestica]
Length = 1996
Score = 37.2 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 12/165 (7%), Positives = 46/165 (27%)
Query: 23 FNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENG 82
+ + ++L+ ++ + S ++E + K + +
Sbjct: 254 LALSNKEENMQDDAKILNSEDQIIAENVSIVKDPVKEVPPEEKKLVKTFQAFELKPLRQK 313
Query: 83 DRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGIS 142
+ + K E L S K S ++++ +
Sbjct: 314 LTLPGDKNRLKKVKDGTKQLCLKSEPTESSQGLEDKEQSLTRKISTSDLLSEKKLGEDEE 373
Query: 143 FAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVI 187
+ + + ++ K+ K ++ ++ ++ ++
Sbjct: 374 ELSELQLRLLALQSASKKWQQKEQQVMKESKEKLTKTKTIQQKIK 418
>gi|145493232|ref|XP_001432612.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124399725|emb|CAK65215.1| unnamed protein product [Paramecium tetraurelia]
Length = 547
Score = 37.2 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 21/177 (11%), Positives = 53/177 (29%), Gaps = 1/177 (0%)
Query: 25 FNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDR 84
+ PI E I K + ++ + Q+ ++ +
Sbjct: 149 LSFDEEDPILVLEQQLEKEITKYKKQLQVKAKEVQHQLENEKKRQKLQHDMIEREKKIED 208
Query: 85 FSDQTK-THATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISF 143
+ + + + ++ K +KE R DK+K ++ K +
Sbjct: 209 LQQKIAHQKELKKKELKRAAQKKFNEIKEKERERQKKLLEDKKKQAEKFEKIRKKLEADE 268
Query: 144 AEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFK 200
++K R ++ + ++ + +A N++ W S K +
Sbjct: 269 LQQKKELEEQERRYQERRHAIQQRKELQDKEYNLHLASTMNQIEQKWAETSQNKDRQ 325
>gi|307246676|ref|ZP_07528746.1| Outer membrane lipoprotein A [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|307255660|ref|ZP_07537464.1| Outer membrane lipoprotein A [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|307260112|ref|ZP_07541822.1| Outer membrane lipoprotein A [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
gi|4099380|gb|AAD00608.1| outer membrane lipoprotein [Actinobacillus pleuropneumoniae]
gi|4099398|gb|AAD00617.1| outer membrane lipoprotein [Actinobacillus pleuropneumoniae]
gi|4099402|gb|AAD00619.1| outer membrane lipoprotein [Actinobacillus pleuropneumoniae serovar
11 str. 56153]
gi|67009881|dbj|BAD99421.1| outer membrane lipoprotein [Actinobacillus pleuropneumoniae]
gi|67009897|dbj|BAD99429.1| outer membrane lipoprotein [Actinobacillus pleuropneumoniae]
gi|67009901|dbj|BAD99431.1| outer membrane lipoprotein [Actinobacillus pleuropneumoniae]
gi|160558669|gb|ABX45023.1| outer membrane lipoprotein [Actinobacillus pleuropneumoniae]
gi|306852376|gb|EFM84611.1| Outer membrane lipoprotein A [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|306861337|gb|EFM93327.1| Outer membrane lipoprotein A [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|306865758|gb|EFM97636.1| Outer membrane lipoprotein A [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
Length = 365
Score = 37.2 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 17/141 (12%), Positives = 41/141 (29%), Gaps = 7/141 (4%)
Query: 1 MRLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP 60
M + L S++ V+ + P S + D + K ++ ++
Sbjct: 1 MNIATKLMASLVASVVLTACSGGGSSGSSSKPNS-------ELTPKVDMSAPKAEQPKKE 53
Query: 61 VVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPV 120
V +S+ ++ + Q + + + K + +
Sbjct: 54 EVPQADNSKAEEPKEMAPQVDSPKAEEPKNMAPQMGNPKLNDPQVMAPKMDNPQKDAPKG 113
Query: 121 SPYDKQKISKATNKEQDLQGI 141
K K + KE ++ I
Sbjct: 114 EELSKDKSNAEILKELGVKDI 134
>gi|262375658|ref|ZP_06068890.1| cell division protein [Acinetobacter lwoffii SH145]
gi|262309261|gb|EEY90392.1| cell division protein [Acinetobacter lwoffii SH145]
Length = 321
Score = 37.2 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 17/200 (8%), Positives = 52/200 (26%), Gaps = 14/200 (7%)
Query: 21 LYFNFNVQLLVPISRREMLSVDN----------IYNEDYHSSKYKKIEEPVVQFKGSSQE 70
+ F + P+ L + I + +E ++ E
Sbjct: 16 MLFGIRMLFKKPVEAVPSLDANLHIDPDSQTPIIPRHVRSQLAQQDVESDRIEPSLGIDE 75
Query: 71 NLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISK 130
S + + K T + + +++ +A ++ + + +
Sbjct: 76 PAPEKPSAFRKAESTPVEPKAVETPVAAPSTEAEGVAKSVATAADVQQVEAEHKNSQTET 135
Query: 131 ATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANW 190
+ + + + + L + + + S I+ +
Sbjct: 136 KEEMPEFSLNRNIEKAEISEFNDESSILDAHLHEQKIVDEESALSNAET-IISLHIYPQG 194
Query: 191 NIPSDFKRFKKLRVKMHFQL 210
+ K L+V + + L
Sbjct: 195 RV---LSGDKTLKVLLKYGL 211
>gi|218699111|ref|YP_002406740.1| cell envelope integrity inner membrane protein TolA [Escherichia
coli IAI39]
gi|218369097|emb|CAR16851.1| membrane anchored protein in TolA-TolQ-TolR complex [Escherichia
coli IAI39]
Length = 411
Score = 37.2 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 15/119 (12%), Positives = 44/119 (36%), Gaps = 3/119 (2%)
Query: 2 RLENGLAISMILHVMFLLLLYF-NFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP 60
+L+ + IS +LHV+ L + +F+ + S+D + + + K +
Sbjct: 10 KLKRAIIISAVLHVILFAALIWSSFDENIEASAGGGGGSSIDAVMVDSGAVVEQYKRMQS 69
Query: 61 VVQFKGS--SQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLR 117
Q + + +E ++ + + + + ++ + +QA + +
Sbjct: 70 QESSAKRSDEQRKMKEQQAAEELREKQVAEQERLKQLEKERLAAQEQKKQAEEAAKQAE 128
>gi|294648348|ref|ZP_06725856.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC
19194]
gi|292825760|gb|EFF84455.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC
19194]
Length = 130
Score = 37.2 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 15/90 (16%), Positives = 29/90 (32%), Gaps = 12/90 (13%)
Query: 182 VRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARK 241
++ WN+P R L+ G VL + ++ + E A +
Sbjct: 51 FEQKIYRAWNMPLGSSGQ---RASARVTLSDSGAVLSVVV----TASDPDVKASVEAAIR 103
Query: 242 AVIKSQAFRLS--PSTYKSWRNITLFFVPS 269
A + + + P + R+ T F
Sbjct: 104 A---AAPYPMPEDPDARREARSFTSNFTAK 130
>gi|187956375|gb|AAI50682.1| Ep300 protein [Mus musculus]
gi|219841782|gb|AAI44977.1| Ep300 protein [Mus musculus]
Length = 2415
Score = 37.2 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 25/167 (14%), Positives = 46/167 (27%), Gaps = 3/167 (1%)
Query: 28 QLLVPISRREMLS-VDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFS 86
P +M S ++ E + E K E R ++ +G
Sbjct: 967 PEKQPSQEVKMESKMEVDKPEPADAQPEDTKEAKGEDVKVEPTEMEERGPELKTDGKEEE 1026
Query: 87 DQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEK 146
+Q T AT++ S K +E MP ++ ++ Q +
Sbjct: 1027 EQPSTSATQSSPAPGQSKKKIFKPEELRQALMPTLEALYRQDPESLPFRQPVDPQLLGIP 1086
Query: 147 KSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIP 193
D V D + K++ + I + W
Sbjct: 1087 DYFDIVKSPMDLSTIKRKLDTGQYQEPW--QYIDDIWLMFNNAWLYN 1131
>gi|10176701|dbj|BAB09923.1| copia-like retrotransposable element [Arabidopsis thaliana]
Length = 1342
Score = 37.2 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 13/111 (11%), Positives = 28/111 (25%), Gaps = 2/111 (1%)
Query: 106 GEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKV 165
E + + ++ ++ I D + + + +
Sbjct: 712 KELQKNDMSEEDKQLTEVERTLIELKNLSADDENQSEGGDNSNQEQASTTRSASKDKQVE 771
Query: 166 EKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFV 216
E S +A R+R+ P F V + + G V
Sbjct: 772 ETDSDDDCLENYLLA--RDRIRRQIRAPQRFVEEDDSLVGFALTMTEDGEV 820
>gi|15612325|ref|NP_223978.1| siderophore-mediated iron transport protein [Helicobacter pylori
J99]
gi|11135450|sp|Q9ZJP4|TONB_HELPJ RecName: Full=Protein tonB
gi|4155861|gb|AAD06833.1| SIDEROPHORE-MEDIATED IRON TRANSPORT PROTEIN [Helicobacter pylori
J99]
Length = 280
Score = 37.2 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 28/254 (11%), Positives = 66/254 (25%), Gaps = 12/254 (4%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
IS L+ + YF P+++ V +S K E +
Sbjct: 18 SFLISFALYA--IGFGYFLLREDAPEPLAQAGTTKVTMSLASINTNSNTKTNAESAKPKE 75
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
++ + +E + K + + E + +
Sbjct: 76 EPKEKPKKEEPKKEEPKKETKPKPKPKPKPKPKPKPKPKPEPKPKPEPKVEEPKKEEPKE 135
Query: 126 QKISKATNKEQDLQGISFAEKK----SIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAI 181
+ + +E + + +K + E + S + +
Sbjct: 136 EPKKEEAKEEAKEKSVPKQVTTKDIVKEKDKQEESNKTSEGATSEAQAYNPGVSNEFLMK 195
Query: 182 VRNRVIANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENAR 240
++ + + P + + V + F +N G V V +L A
Sbjct: 196 IQTAISSKNRYPKMAQIRGIEGEVLVSFTINADGSVTDIKVVKSNTTD-----ILNHAAL 250
Query: 241 KAVIKSQAFRLSPS 254
+A+ + P
Sbjct: 251 EAIKSAAHLFPKPD 264
>gi|107021876|ref|YP_620203.1| TonB-like [Burkholderia cenocepacia AU 1054]
gi|116688824|ref|YP_834447.1| TonB family protein [Burkholderia cenocepacia HI2424]
gi|105892065|gb|ABF75230.1| Cell division and transport-associated protein TolA [Burkholderia
cenocepacia AU 1054]
gi|116646913|gb|ABK07554.1| Cell division and transport-associated protein TolA [Burkholderia
cenocepacia HI2424]
Length = 351
Score = 37.2 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 19/135 (14%), Positives = 36/135 (26%), Gaps = 9/135 (6%)
Query: 136 QDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSD 195
+ A+ + + + S S + VR RV N
Sbjct: 226 DRERSARLAQMQGLSGAGEGGGEGLAKSGTGTGSGGNAATPGYADKVRRRVKPN---IVW 282
Query: 196 FKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPST 255
L + + G VL G + + A+ S S
Sbjct: 283 GGERAGLTTVVKIRCTPSGDVLSASVSRSSGNSGW-----DQAVVSAIHASVPLP-PDSN 336
Query: 256 YKSWRNITLFFVPSK 270
++ +IT+ F ++
Sbjct: 337 GRTPSDITITFKAAE 351
>gi|328717207|ref|XP_003246148.1| PREDICTED: putative sodium-coupled neutral amino acid transporter
10-like isoform 2 [Acyrthosiphon pisum]
gi|328717209|ref|XP_001945554.2| PREDICTED: putative sodium-coupled neutral amino acid transporter
10-like isoform 1 [Acyrthosiphon pisum]
Length = 630
Score = 37.2 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 14/149 (9%), Positives = 44/149 (29%), Gaps = 7/149 (4%)
Query: 29 LLVPISRREML--SVDN-----IYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQEN 81
+ PI ++ +VD + E+ ++ I + + + + L+ E
Sbjct: 434 VEPPIPVEPIIKSNVDVKQEKSVKVENGNTISKDAINKEDEELEKRPEIELLEKLKSHEK 493
Query: 82 GDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGI 141
++ E + + ++ +KQ++ K + +
Sbjct: 494 EEKKILAESKKILEELKGARQVQFEKNKRRPVNNVKDLNFSMNKQEVKKNDISLDEKKNQ 553
Query: 142 SFAEKKSIDTVVVRPDKKELLSKVEKSSR 170
+K + V+ ++ +
Sbjct: 554 LVKDKLPLPLVLKEANRPNKTKMETIRDK 582
>gi|193214417|ref|YP_001995616.1| hypothetical protein Ctha_0700 [Chloroherpeton thalassium ATCC
35110]
gi|193087894|gb|ACF13169.1| hypothetical protein Ctha_0700 [Chloroherpeton thalassium ATCC
35110]
Length = 187
Score = 37.2 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 21/163 (12%), Positives = 42/163 (25%), Gaps = 7/163 (4%)
Query: 104 SKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLS 163
SK Y KQ EQ + ++ S + ++ +
Sbjct: 29 SKKGDDADLLKPDSAAQVDYLKQYEKTLAEPEQQDKAGLIKKEYSTQEAAPQAEETPTTT 88
Query: 164 KVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVD 223
+ + + N++ + + K ++ Q+ G V V
Sbjct: 89 AKTTVQDPYDLMEPVLDDLENKLSPIIDRAWRQRGLKGY-IEFDLQVGPDGRVAKFNLVH 147
Query: 224 VVGGTELVRRMLRENARKAVIKSQAFRLSPSTYKSWRNITLFF 266
+ KA+ +S F Y + L F
Sbjct: 148 SD------VDAATLSTVKAIARSTRFEPHDEKYGNMNTPPLKF 184
>gi|123442481|ref|YP_001006460.1| transport protein TonB [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|122089442|emb|CAL12290.1| TonB protein [Yersinia enterocolitica subsp. enterocolitica 8081]
Length = 253
Score = 37.2 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 28/225 (12%), Positives = 60/225 (26%), Gaps = 24/225 (10%)
Query: 2 RLENGLAISMILHVMFL-LLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP 60
RL LA S+ +H + LLY + + P ++V + + + + + E
Sbjct: 11 RLTWPLAFSVGIHGSVIAALLYVSVEQMRIQPEIEDAPIAVTMVNIDTFAAPQPAAAEPQ 70
Query: 61 VVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPV 120
+ + + K + +K+ + +
Sbjct: 71 AEPEPEPEPIEEAPPEPEVLPEPVPVSIPEPVKPKPKPKPVKKEVKKPEVKKPDVKKTVA 130
Query: 121 SPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIA 180
P DK S + A K S+ V K L + +
Sbjct: 131 PPDDKPFKSDEPALVATNAPVKSAPKASVPGVSTSTGPKALSKAKPTYPARALALGVE-- 188
Query: 181 IVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVV 225
+VK+ + +++ G V ++
Sbjct: 189 ---------------------GQVKVQYDIDENGRVTNVRILEAT 212
>gi|281359563|ref|NP_001162826.1| bent, isoform G [Drosophila melanogaster]
gi|272482442|gb|ACZ95095.1| bent, isoform G [Drosophila melanogaster]
Length = 8588
Score = 37.2 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 11/159 (6%), Positives = 43/159 (27%), Gaps = 8/159 (5%)
Query: 26 NVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRF 85
++ P+ + + +D + + K+ + + ++ + E +
Sbjct: 771 SIIDKKPLEQVDNKPID----ANKNPQPLKEEIPRLKPAEKRRTSKVIEEPKPDEGLPKL 826
Query: 86 SDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAE 145
+ E + K + K + Y++ ++ K + +
Sbjct: 827 RKASIAQVKEEAKPAAPKLKAKAKAKPKYEELPEIPDYERPQLEKYEKSDFTPSDFARDL 886
Query: 146 KKSIDTVVV----RPDKKELLSKVEKSSRKRIPSQDAIA 180
+ + +L++ +K +
Sbjct: 887 EIPNKMEKPIIDSGKKEPAVLAQKNGIPKKTDIIEQYAD 925
>gi|78065364|ref|YP_368133.1| TonB/TolA-like protein [Burkholderia sp. 383]
gi|77966109|gb|ABB07489.1| Cell division and transport-associated protein TolA [Burkholderia
sp. 383]
Length = 351
Score = 37.2 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 19/135 (14%), Positives = 36/135 (26%), Gaps = 9/135 (6%)
Query: 136 QDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSD 195
+ A+ + + + S S + VR RV N
Sbjct: 226 DRERSARLAQMQGLSGAGEGGGEGLAKSGTGTGSGGNAATPGYADKVRRRVKPN---IVW 282
Query: 196 FKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPST 255
L + + G VL G + + A+ S S
Sbjct: 283 GGERAGLTTVVKIRCTPSGDVLSASVSRSSGNSGW-----DQAVVNAIHASVPLP-PDSN 336
Query: 256 YKSWRNITLFFVPSK 270
++ +IT+ F ++
Sbjct: 337 GRTPSDITITFKAAE 351
>gi|332971557|gb|EGK10507.1| transport protein TonB [Kingella kingae ATCC 23330]
Length = 307
Score = 37.2 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 13/169 (7%), Positives = 34/169 (20%)
Query: 1 MRLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP 60
M+ L S++L V L + P + ++ + + +
Sbjct: 1 MKNNRLLNPSVVLVVSLLHAGIIALAWEARKPPEPVSVDNLTFVDLGSLDGNDQPAADGA 60
Query: 61 VVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPV 120
+ E + + + A + K ++
Sbjct: 61 PASLESKPAEPVSKPTPPPVAPTPPKPEPVVKAEPTVKAVVRNDKPADVVEAKPKPEPIK 120
Query: 121 SPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSS 169
K + K + T ++
Sbjct: 121 PVVTPPKPEIPIKQPAPPTPTEPVNKPATPTTETPLKPSNTAGGAPANA 169
>gi|332096510|gb|EGJ01506.1| protein TolA [Shigella dysenteriae 155-74]
Length = 409
Score = 37.2 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 15/119 (12%), Positives = 45/119 (37%), Gaps = 3/119 (2%)
Query: 2 RLENGLAISMILHVMFLLLLYF-NFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP 60
+L+ + IS +LHV+ L + +F+ + S+D + + + K +
Sbjct: 10 KLKRAIIISAVLHVILFAALIWSSFDENIEASAGGGGGSSIDAVMVDSGAVVEQYKRMQS 69
Query: 61 VVQFKGS--SQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLR 117
Q + + +E ++ + + + + + ++ + +QA + +
Sbjct: 70 QESSAKRSDEQRKMKEQQAAEELREKQAAEQERLKQLEKERLAAQEQKKQAEEAAKQAE 128
>gi|119472450|ref|ZP_01614549.1| putative TolA protein [Alteromonadales bacterium TW-7]
gi|119444887|gb|EAW26186.1| putative TolA protein [Alteromonadales bacterium TW-7]
Length = 308
Score = 37.2 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 39/317 (12%), Positives = 98/317 (30%), Gaps = 60/317 (18%)
Query: 3 LENGLAISMI--------------LHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNED 48
+ + L S++ +H ++ N + P + ++VD E
Sbjct: 1 MSSALVKSVVLHLGLGGLLYASANIHAPTPKVMEVTLNTAIPEPDNAVSAVTVDQKMVEQ 60
Query: 49 YHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQ 108
+ KK ++ ++ R ++ + + K E + K ++ E
Sbjct: 61 KIAELQKKEKDKKRAEDKRIRDLERRAADARKQRESEARNIKKLERERKAKEKEKAQAEA 120
Query: 109 ALKESALLRMPV-------------------SPYDKQKISKATNKEQDLQGISFAEKK-- 147
K++ + + DK+K+ + K+ + + I ++
Sbjct: 121 QAKKAREIEQKERAKAKQAEKQKQEAEKAAKAAADKRKLEEEALKKAEAERIKREQEAKE 180
Query: 148 -------------SIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPS 194
+ + K++ + + A++ R+ N I
Sbjct: 181 RAAEAERKRQQALQEQILQEQLAKEQAARSKIRQQQVASEVDKYRALIMARIQQNLLIDE 240
Query: 195 DFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPS 254
K + +++ +L G V ++ +++ E A +AV + +S
Sbjct: 241 KM---KNQQCRVNIRLGFNGLVTQVKSL-------GGDKLVCEAALRAVRMADTLPVSKD 290
Query: 255 T--YKSWRNITLFFVPS 269
+ +NI L P
Sbjct: 291 RDVFDQLKNINLTIKPE 307
>gi|332290105|ref|YP_004420957.1| cell envelope integrity inner membrane protein TolA [Gallibacterium
anatis UMN179]
gi|330433001|gb|AEC18060.1| cell envelope integrity inner membrane protein TolA [Gallibacterium
anatis UMN179]
Length = 422
Score = 37.2 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 21/143 (14%), Positives = 46/143 (32%), Gaps = 12/143 (8%)
Query: 126 QKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNR 185
Q++++ + L S E S + + AI++
Sbjct: 287 QRLAQQNALDDFLNNGDIGGGSSRQGSNSNRKGSEGSSGGNGAGEGDVVGDQYTAIIKRE 346
Query: 186 VIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIK 245
+ W + F + +L + G +L V G + + +A +AV
Sbjct: 347 IQRRWLKDASFANK---VCTVQIELARDGTILNYHKV--SGPDD-----ICTSALRAVAL 396
Query: 246 SQAFRLSPST--YKSWRNITLFF 266
++ PS Y+ ++ + F
Sbjct: 397 TKKVPAPPSDAVYRKYQKPVIDF 419
>gi|312863102|ref|ZP_07723340.1| LPXTG-motif cell wall anchor domain protein [Streptococcus
vestibularis F0396]
gi|311100638|gb|EFQ58843.1| LPXTG-motif cell wall anchor domain protein [Streptococcus
vestibularis F0396]
Length = 2165
Score = 37.2 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 16/181 (8%), Positives = 52/181 (28%), Gaps = 1/181 (0%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
++ +S+ +L Y V L S + L + + ++ K+ E +
Sbjct: 1 MKKSTVLSLTT-AAVILAAYVPNEVILADTPSSEDSLKISDKETVIDKQNENKENLEDIH 59
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
+S++ + ++ E + S + + + +
Sbjct: 60 NVIETSKDTEEKKTTIVEEKEVVSKNPVIDNNTSNEEAKIKEENSNQSQGEKADSSASKD 119
Query: 123 YDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIV 182
+ + + + EK + ++ K + ++D + +
Sbjct: 120 PESPQKEDKLVYIAEFKDKESGEKAIKELSNLKNTKVLYTYDRIFNGSAIETTKDTLDKI 179
Query: 183 R 183
+
Sbjct: 180 K 180
>gi|299769116|ref|YP_003731142.1| group A colicins tolerance protein [Acinetobacter sp. DR1]
gi|298699204|gb|ADI89769.1| group A colicins tolerance protein [Acinetobacter sp. DR1]
Length = 487
Score = 37.2 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 23/208 (11%), Positives = 63/208 (30%), Gaps = 8/208 (3%)
Query: 47 EDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKG 106
+ K ++ + + Q+ + + A + K + +K
Sbjct: 271 AKRKADADAKAKQQKAADDAKRKADADAKAKQQKANEDAKRKADADAKAKQQKANDDAKR 330
Query: 107 EQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVE 166
+ A + ++ + A K+Q + + ++ +K +
Sbjct: 331 KADADAKAKQQKANDDAKRKADADAKAKQQKAADDAKRKAEAEAEAKAASAQKAQEEAAQ 390
Query: 167 KSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVG 226
K + + + A ++ +W++P+ V + F L+ G V + G
Sbjct: 391 KKAEAKKVASSARRDFEQKIRRSWDVPTGSSGK---TVGVRFTLSDSGSVNSIVITRSSG 447
Query: 227 GTELVRRMLRENARKAVIKSQAFRLSPS 254
L + + A+ S + +
Sbjct: 448 DD-----ALDASIKAAIQASAPYPMPSD 470
>gi|262199188|ref|YP_003270397.1| TonB protein [Haliangium ochraceum DSM 14365]
gi|262082535|gb|ACY18504.1| putative TonB protein [Haliangium ochraceum DSM 14365]
Length = 259
Score = 37.2 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 26/229 (11%), Positives = 51/229 (22%), Gaps = 23/229 (10%)
Query: 7 LAISMILHVM-FLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
++ S+ILH + LL + F V +P+ +RE+ P
Sbjct: 21 ISFSIILHAAGLVALLIYGFWVIEKLPLPKREV--------------TIAVAPPPPPPPP 66
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
+ + R T + + +
Sbjct: 67 PPAPSKKKVETKPDPKIKRVKPMDTTQPVDKKVEDEDVEIEIVEDYGIEGGVEGGVAGGM 126
Query: 126 QKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNR 185
E G+ A VE S V+ +
Sbjct: 127 IGGVVGGVLEGVPGGVIEAPPPPPPPPPPAKPAVVPQVAVEAKRIAGEKSIQPDDTVKIQ 186
Query: 186 VIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRM 234
+ ++ L + G + V G + R++
Sbjct: 187 MQR--------DGKSRVVSTYRMCLTKAGTIASINMVKSSGYPDYDRKI 227
>gi|170732123|ref|YP_001764070.1| protein TolA [Burkholderia cenocepacia MC0-3]
gi|169815365|gb|ACA89948.1| protein TolA [Burkholderia cenocepacia MC0-3]
Length = 351
Score = 37.2 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 19/135 (14%), Positives = 36/135 (26%), Gaps = 9/135 (6%)
Query: 136 QDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSD 195
+ A+ + + + S S + VR RV N
Sbjct: 226 DRERSARLAQMQGLSGAGEGGGEGLAKSGTGTGSGGNAATPGYADKVRRRVKPN---IVW 282
Query: 196 FKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPST 255
L + + G VL G + + A+ S S
Sbjct: 283 GGERAGLTTVVKIRCTPSGDVLSASVSRSSGNSGW-----DQAVVSAIHASVPLP-PDSN 336
Query: 256 YKSWRNITLFFVPSK 270
++ +IT+ F ++
Sbjct: 337 GRTPSDITITFKAAE 351
>gi|312116243|ref|YP_004013839.1| TonB family protein [Rhodomicrobium vannielii ATCC 17100]
gi|312116281|ref|YP_004013877.1| TonB family protein [Rhodomicrobium vannielii ATCC 17100]
gi|311221372|gb|ADP72740.1| TonB family protein [Rhodomicrobium vannielii ATCC 17100]
gi|311221410|gb|ADP72778.1| TonB family protein [Rhodomicrobium vannielii ATCC 17100]
Length = 243
Score = 37.2 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 15/94 (15%), Positives = 29/94 (30%), Gaps = 9/94 (9%)
Query: 164 KVEKSSRKRIPSQDAIAIVRNRVIANWN---IPSDFKRFKKLRVKMHFQLNQKGFVLGKI 220
+ + D V R+ + S R + +R+ + G ++ K
Sbjct: 139 RPATAQTPGAVPSDYANKVYQRINRVASSGFPKSALSRGQSVRISYVIVIGAGGELVSKS 198
Query: 221 NVDVVGGTELVRRMLRENARKAVIKSQAFRLSPS 254
V+ L +A+ +S F PS
Sbjct: 199 VVNSGNA------ALDRAVSEALARSAPFPAPPS 226
>gi|51596443|ref|YP_070634.1| transport protein TonB [Yersinia pseudotuberculosis IP 32953]
gi|186895494|ref|YP_001872606.1| transport protein TonB [Yersinia pseudotuberculosis PB1/+]
gi|51589725|emb|CAH21355.1| TonB protein [Yersinia pseudotuberculosis IP 32953]
gi|186698520|gb|ACC89149.1| TonB family protein [Yersinia pseudotuberculosis PB1/+]
Length = 248
Score = 37.2 bits (84), Expect = 2.7, Method: Composition-based stats.
Identities = 33/239 (13%), Positives = 61/239 (25%), Gaps = 28/239 (11%)
Query: 2 RLENGLAISMILHVMFL-LLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP 60
RL L S+ LH + LLY + + P L+V + ++ + +
Sbjct: 11 RLTWSLIFSIGLHGSVVAALLYVSVEQMKIQPEIEDTPLAVTMVNIAEFAAPQPAAAAPE 70
Query: 61 VVQFKGSSQEN------------------------LVRDFSVQENGDRFSDQTKTHATEN 96
VQ + E +E +T+ +
Sbjct: 71 PVQETPAVPEETPPVLEETPPEPEELPEPVPEPVKPKPKPVKKEVKKPEVKKTQAPPDDK 130
Query: 97 ETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRP 156
K ++ + KA +K + V V+
Sbjct: 131 PFKSDEAALVANNAPVKSAPVASTPGLSTSAGPKALSKAKPSYPARALALGIEGQVKVQY 190
Query: 157 DKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGF 215
D E + P V+ +V+ W K + F+L+ K
Sbjct: 191 DIDESGRVTNVRVLEATPRNTFEREVK-QVMRKWRFE--AVAAKNYVTTIVFKLDGKME 246
>gi|281359561|ref|NP_001162825.1| bent, isoform F [Drosophila melanogaster]
gi|272482441|gb|ACZ95094.1| bent, isoform F [Drosophila melanogaster]
Length = 8933
Score = 37.2 bits (84), Expect = 2.7, Method: Composition-based stats.
Identities = 12/159 (7%), Positives = 45/159 (28%), Gaps = 8/159 (5%)
Query: 26 NVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRF 85
++ P+ + + +D + + K+ + + ++ + E +
Sbjct: 1046 SIIDKKPLEQVDNKPID----ANKNPQPLKEEIPRLKPAEKRRTSKVIEEPKPDEGLPKL 1101
Query: 86 SDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKE----QDLQGI 141
+ E + K + K + Y++ ++ K + + +
Sbjct: 1102 RKASIAQVKEEAKPAAPKLKAKAKAKPKYEELPEIPDYERPQLEKYEKSDFTPSDFARDL 1161
Query: 142 SFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIA 180
K + + +L++ +K +
Sbjct: 1162 EIPNKMEKPIIDSGKKEPAVLAQKNGIPKKTDIIEQYAD 1200
>gi|161077567|ref|NP_001036261.2| rugose, isoform C [Drosophila melanogaster]
gi|158031718|gb|ABI30968.2| rugose, isoform C [Drosophila melanogaster]
Length = 3712
Score = 37.2 bits (84), Expect = 2.7, Method: Composition-based stats.
Identities = 16/173 (9%), Positives = 45/173 (26%), Gaps = 13/173 (7%)
Query: 29 LLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQ 88
L P + SV+ + + K E +E + +Q
Sbjct: 1633 LKKPEDPKGHSSVE-------------PKTPNLEEPKPQETEQQKSQEVAEELPQKPEEQ 1679
Query: 89 TKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKS 148
+ + A +++ Q ++ + + + +
Sbjct: 1680 VVAIVNQVLDTLVDDTVKAVAAEQTTQTSPAPEEQSPQILAMESPATSVRVKPTEVDSTT 1739
Query: 149 IDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKK 201
T L+ +V++ ++ Q A + + +N + +
Sbjct: 1740 QTTPKNEAGSSLLVEQVQQVLQEDDAQQSAGMTIEDEDYSNQQAAAAVENANS 1792
>gi|221329709|ref|NP_001138159.1| rugose, isoform F [Drosophila melanogaster]
gi|220901677|gb|ACL82891.1| rugose, isoform F [Drosophila melanogaster]
Length = 3505
Score = 37.2 bits (84), Expect = 2.7, Method: Composition-based stats.
Identities = 16/173 (9%), Positives = 45/173 (26%), Gaps = 13/173 (7%)
Query: 29 LLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQ 88
L P + SV+ + + K E +E + +Q
Sbjct: 1426 LKKPEDPKGHSSVE-------------PKTPNLEEPKPQETEQQKSQEVAEELPQKPEEQ 1472
Query: 89 TKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKS 148
+ + A +++ Q ++ + + + +
Sbjct: 1473 VVAIVNQVLDTLVDDTVKAVAAEQTTQTSPAPEEQSPQILAMESPATSVRVKPTEVDSTT 1532
Query: 149 IDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKK 201
T L+ +V++ ++ Q A + + +N + +
Sbjct: 1533 QTTPKNEAGSSLLVEQVQQVLQEDDAQQSAGMTIEDEDYSNQQAAAAVENANS 1585
>gi|221329705|ref|NP_001138157.1| rugose, isoform D [Drosophila melanogaster]
gi|220901675|gb|ACL82890.1| rugose, isoform D [Drosophila melanogaster]
Length = 3722
Score = 37.2 bits (84), Expect = 2.7, Method: Composition-based stats.
Identities = 16/173 (9%), Positives = 45/173 (26%), Gaps = 13/173 (7%)
Query: 29 LLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQ 88
L P + SV+ + + K E +E + +Q
Sbjct: 1643 LKKPEDPKGHSSVE-------------PKTPNLEEPKPQETEQQKSQEVAEELPQKPEEQ 1689
Query: 89 TKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKS 148
+ + A +++ Q ++ + + + +
Sbjct: 1690 VVAIVNQVLDTLVDDTVKAVAAEQTTQTSPAPEEQSPQILAMESPATSVRVKPTEVDSTT 1749
Query: 149 IDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKK 201
T L+ +V++ ++ Q A + + +N + +
Sbjct: 1750 QTTPKNEAGSSLLVEQVQQVLQEDDAQQSAGMTIEDEDYSNQQAAAAVENANS 1802
>gi|145481585|ref|XP_001426815.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124393892|emb|CAK59417.1| unnamed protein product [Paramecium tetraurelia]
Length = 545
Score = 37.2 bits (84), Expect = 2.7, Method: Composition-based stats.
Identities = 17/170 (10%), Positives = 53/170 (31%)
Query: 31 VPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTK 90
+ + L + + K K+++ + K + + ++ + +
Sbjct: 147 PILVLEQQLEKEIAKYKKSLQIKAKEVQHQLNNEKRRQKLHQDMIEREKKIEELKFKISI 206
Query: 91 THATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSID 150
A + + + +S K +K+ + D+++ ++ K + K
Sbjct: 207 QKARKKKEMKQASQKKVNEIKQKEREKQIKLLEDRKRQAEKEEKIRKKLEQDEISHKKEL 266
Query: 151 TVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFK 200
R ++ L + + + +A ++ W S K +
Sbjct: 267 DEQERKYQERRLQIQLRKTLQDRQYNQQMAQTMTQIQQKWAETSLNKEKQ 316
>gi|45552151|ref|NP_995598.1| bent, isoform C [Drosophila melanogaster]
gi|45444797|gb|AAS64600.1| bent, isoform C [Drosophila melanogaster]
Length = 8648
Score = 37.2 bits (84), Expect = 2.7, Method: Composition-based stats.
Identities = 12/159 (7%), Positives = 45/159 (28%), Gaps = 8/159 (5%)
Query: 26 NVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRF 85
++ P+ + + +D + + K+ + + ++ + E +
Sbjct: 831 SIIDKKPLEQVDNKPID----ANKNPQPLKEEIPRLKPAEKRRTSKVIEEPKPDEGLPKL 886
Query: 86 SDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKE----QDLQGI 141
+ E + K + K + Y++ ++ K + + +
Sbjct: 887 RKASIAQVKEEAKPAAPKLKAKAKAKPKYEELPEIPDYERPQLEKYEKSDFTPSDFARDL 946
Query: 142 SFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIA 180
K + + +L++ +K +
Sbjct: 947 EIPNKMEKPIIDSGKKEPAVLAQKNGIPKKTDIIEQYAD 985
>gi|169823883|ref|YP_001691494.1| hypothetical protein FMG_0186 [Finegoldia magna ATCC 29328]
gi|167830688|dbj|BAG07604.1| hypothetical protein [Finegoldia magna ATCC 29328]
Length = 4919
Score = 37.2 bits (84), Expect = 2.7, Method: Composition-based stats.
Identities = 13/148 (8%), Positives = 37/148 (25%)
Query: 41 VDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKR 100
V+ E+ K + EE + + + + +R + K+ ++ +
Sbjct: 441 VEEKQEEEPIIKKKEIKEEVKSEPATPQERKQKAEEFDKALKERKEEIKKSEDKKDANNK 500
Query: 101 SSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKE 160
+ K + S + + + K + K + V
Sbjct: 501 EDNKKTTDKKEVSKETKGLLEGIKEFFGFSNLQKADRELKAILSVKANGLKEVQALLSSF 560
Query: 161 LLSKVEKSSRKRIPSQDAIAIVRNRVIA 188
+ D ++ +
Sbjct: 561 EDKYHLTQQEQAKLMDDNKDAIKALIER 588
>gi|161613773|ref|YP_001587738.1| transport protein TonB [Salmonella enterica subsp. enterica serovar
Paratyphi B str. SPB7]
gi|161363137|gb|ABX66905.1| hypothetical protein SPAB_01507 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
Length = 281
Score = 37.2 bits (84), Expect = 2.7, Method: Composition-based stats.
Identities = 24/228 (10%), Positives = 57/228 (25%), Gaps = 19/228 (8%)
Query: 8 AISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGS 67
+S+ +H + L + Q++ + + ++V + D + + V
Sbjct: 55 LLSVGIHGAVVAGLLYTSVHQVIELPAPAQPITVTMVSPADLEPPQAVQPPPEPVVEPEP 114
Query: 68 SQ--------------ENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKES 113
E + + E + + +
Sbjct: 115 EPEPIPEPPKEAPVVIEKPKPKPKPKPKPKPVKKVEEQPKREVKPAAPRPASPFENSAPV 174
Query: 114 ALLRMPVSPYDKQKISKAT-NKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKR 172
S K +S T + + + + R K ++ + +
Sbjct: 175 RPTSSTASATSKPAVSVPTGPRALSRNQPQYPARAQALRIEGRVKVKFDVTSAGRVENVQ 234
Query: 173 IPSQDAIAIVRNRVI---ANWNIPSDFKRFKKLRVKMHFQLNQKGFVL 217
I S + V W + L V + F+LN +
Sbjct: 235 ILSAQPANMFEREVKNAMRKWRYEAGKPGS-GLVVNIIFRLNGTAQIE 281
>gi|296213991|ref|XP_002753524.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 1
[Callithrix jacchus]
gi|296213993|ref|XP_002753525.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 2
[Callithrix jacchus]
Length = 1118
Score = 37.2 bits (84), Expect = 2.7, Method: Composition-based stats.
Identities = 16/166 (9%), Positives = 44/166 (26%), Gaps = 2/166 (1%)
Query: 26 NVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRF 85
+ P +++ I +++ S + +
Sbjct: 347 PTAQMSPPPIEVDENIELISDQNERMGPLNISTPVEPVAPSKSDVSPIIQPVPTIKNVPQ 406
Query: 86 SDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKI--SKATNKEQDLQGISF 143
D+TK A + + S+ + S + + + S + +
Sbjct: 407 IDRTKKPAVKLPEEHRIKSESTNHEQPSPQNGKVIPDRSTKPVVSSPTLLLTDEEKARIH 466
Query: 144 AEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIAN 189
AE + + + + E+ + + Q+ A + N
Sbjct: 467 AETALLMEKSKQEKELRERQQGEQKEKLKREEQEQKAKKKQEAEEN 512
>gi|225867102|ref|YP_002752480.1| hypothetical protein BCA_5268 [Bacillus cereus 03BB102]
gi|225790842|gb|ACO31059.1| putative lipoprotein [Bacillus cereus 03BB102]
Length = 285
Score = 37.2 bits (84), Expect = 2.7, Method: Composition-based stats.
Identities = 14/135 (10%), Positives = 34/135 (25%), Gaps = 4/135 (2%)
Query: 86 SDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAE 145
+Q + + E+ + + ++ P Q++ ++T ++ ++
Sbjct: 24 KEQANYEPYKKHDSVETEKGEEKTSNPTKVEKVDEEPTKPQQVEESTKEDSEVNDRRPYY 83
Query: 146 KKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVK 205
K + + L IA + +
Sbjct: 84 KDANNDAPTV----SLEQYDGIKVGMSANKVKEIAGAPRFIEKYKSFSIYGYLGHGGEGT 139
Query: 206 MHFQLNQKGFVLGKI 220
M N G V K
Sbjct: 140 MTITFNPDGSVTKKE 154
>gi|188528130|ref|YP_001910817.1| siderophore-mediated iron transport protein (tonB) [Helicobacter
pylori Shi470]
gi|188144370|gb|ACD48787.1| siderophore-mediated iron transport protein (tonB) [Helicobacter
pylori Shi470]
Length = 284
Score = 37.2 bits (84), Expect = 2.7, Method: Composition-based stats.
Identities = 25/256 (9%), Positives = 72/256 (28%), Gaps = 12/256 (4%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
IS L+ + + + +++ ++K +
Sbjct: 18 SFLISFALYAIGFGYFLLREEAPAPLAQAGTTKVTMSLASINTNSNTKTNAESAKPKEEP 77
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
+ ++ + + K + + + V +
Sbjct: 78 KEKPKKEEPKEKPKKEVSKPKPKPKPKPKPKPKPKPEPKPKPEPEPKPEPKVEEVKKEEP 137
Query: 126 QKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEK------SSRKRIPSQDAI 179
++ K +++ + S ++ + +V DK+E +K + + S + +
Sbjct: 138 KEEPKKEEAKEEAKEKSAPKQVTTKDIVKEKDKQEESNKTSEGATSEAQAYNPGVSNEFL 197
Query: 180 AIVRNRVIANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLREN 238
++ + + P + + V + F +N G V V +L
Sbjct: 198 MKIQTAISSKNRYPKMAQIRGIEGEVLVSFVINPDGSVTDIKIVKSNTTD-----ILNHA 252
Query: 239 ARKAVIKSQAFRLSPS 254
A +A+ + P
Sbjct: 253 ALEAIKNAAYLFPKPE 268
>gi|320581810|gb|EFW96029.1| Translation initiation factor eIF4G, putative [Pichia angusta DL-1]
Length = 1016
Score = 37.2 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 15/155 (9%), Positives = 39/155 (25%), Gaps = 7/155 (4%)
Query: 29 LLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQ 88
P+ + E+ +++ K + + + + +
Sbjct: 247 APKPVEKPEI-------SKEEPKEPAKPTVPTAFVEQQKEVTKEIEKIGETKEIEETQPE 299
Query: 89 TKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKS 148
+K +E + S E + P K++ KE+ + +S +
Sbjct: 300 SKQAEKPDELQAVPESPIESIQPKPVAASAPSVDEGKEEAQPTPVKEEPINAVSEQTEGP 359
Query: 149 IDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVR 183
+ V + E + R
Sbjct: 360 ESSPVADSQEDTKDETAETLEAASPGIDKTFDMTR 394
>gi|159185083|ref|NP_355126.2| hypothetical protein Atu2166 [Agrobacterium tumefaciens str. C58]
gi|159140356|gb|AAK87911.2| conserved hypothetical protein [Agrobacterium tumefaciens str. C58]
Length = 320
Score = 37.2 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 12/160 (7%), Positives = 39/160 (24%), Gaps = 4/160 (2%)
Query: 21 LYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQE 80
+F ++ P E ++V+ + + + + + +E
Sbjct: 30 FFFELPERIAEP-QEPESVNVELVPPPEEKKEEAAPPPAAAAKAEKPQPPPPPPPAPPKE 88
Query: 81 NGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRM---PVSPYDKQKISKATNKEQD 137
+ T + + + E ++ P + + +
Sbjct: 89 DVKPTPQPQATLPSISMRPEEMQADKEDKPGKAEEAEKSQASEEPASQPEKAAEEKPAPP 148
Query: 138 LQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQD 177
+ V P K+E + + + +
Sbjct: 149 AANSDLQASAEQGEIAVSPVKEETPPEQPPVPQAKPAEEK 188
>gi|324504716|gb|ADY42032.1| Apoptosis-inducing factor 1 [Ascaris suum]
Length = 717
Score = 37.2 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 8/156 (5%), Positives = 30/156 (19%), Gaps = 9/156 (5%)
Query: 27 VQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFS 86
+ P +++ + + + V+ + + E +
Sbjct: 155 SKKSEPEPSPPVVAAE--------QLEQEPEVVKEVEASPPATPE-PSEQIPPEKPAKSG 205
Query: 87 DQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEK 146
+ + ++ KA + E
Sbjct: 206 AMPIVVKKLQHEDEHDKEERISTEAKKRIVAATDHEDKPAAEKKAERWSSERYSHLPEEI 265
Query: 147 KSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIV 182
+ LS + + ++ +
Sbjct: 266 PYLLIGAGTAAYYAALSIRARDADAKVLMIGEENQL 301
>gi|166796781|gb|AAI59253.1| Unknown (protein for IMAGE:8994562) [Danio rerio]
Length = 782
Score = 37.2 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 14/164 (8%), Positives = 33/164 (20%)
Query: 25 FNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDR 84
P + D + + P Q S D S++ +
Sbjct: 261 LPSVSSTPPPVPKRGKAPPPPPPDQSPQEEPVKKSPAPQPIRSQAPPPPPDLSIKTLTPQ 320
Query: 85 FSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFA 144
+ +K S + + P +S + +
Sbjct: 321 PISSQAPPPPTDLSKESPVPQPMGLQPAAEPHPEVEWPLAPPPVSLSPPAGSAQCALPLT 380
Query: 145 EKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIA 188
+ +V R Q + + ++
Sbjct: 381 IGAELTELVRRNTGLSCELSRVAVGVVVGRLQGELPGAQVQLEQ 424
>gi|313681217|ref|YP_004058955.1| tonb family protein [Sulfuricurvum kujiense DSM 16994]
gi|313154077|gb|ADR32755.1| TonB family protein [Sulfuricurvum kujiense DSM 16994]
Length = 229
Score = 37.2 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 23/205 (11%), Positives = 63/205 (30%), Gaps = 1/205 (0%)
Query: 1 MRLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHS-SKYKKIEE 59
MR N IS+ +H+ L+ + + E + ++ + + +
Sbjct: 1 MRSANSFFISVGIHLSLAALMIGTLSAVRKNTPAAEEKMVLNLLTQTPAPKFPEPVAKPQ 60
Query: 60 PVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMP 119
P VQ K + + + + + + ++ + + P
Sbjct: 61 PPVQPKVPLPAVKPPEARPVPQPKKTVTEQSKPFMNTPVQTAPLAPNVSSVPPARVTEQP 120
Query: 120 VSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAI 179
+ P + + A +++ + + +SI + K L K E + +
Sbjct: 121 IQPQAIKAVPPAQKQQERYEEENLGRIRSILMERLTYPKNALRLKQEGEATVTFTFEPDR 180
Query: 180 AIVRNRVIANWNIPSDFKRFKKLRV 204
+ + + + + K L +
Sbjct: 181 EVSQISITKSSGFDLLDEAAKNLII 205
>gi|32171514|sp|Q9W4E2|NBEA_DROME RecName: Full=Neurobeachin; AltName: Full=A-kinase anchor protein
550; Short=AKAP 550; AltName: Full=Protein rugose;
AltName: Full=dAKAP550
Length = 3584
Score = 37.2 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 16/173 (9%), Positives = 45/173 (26%), Gaps = 13/173 (7%)
Query: 29 LLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQ 88
L P + SV+ + + K E +E + +Q
Sbjct: 1505 LKKPEDPKGHSSVE-------------PKTPNLEEPKPQETEQQKSQEVAEELPQKPEEQ 1551
Query: 89 TKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKS 148
+ + A +++ Q ++ + + + +
Sbjct: 1552 VVAIVNQVLDTLVDDTVKAVAAEQTTQTSPAPEEQSPQILAMESPATSVRVKPTEVDSTT 1611
Query: 149 IDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKK 201
T L+ +V++ ++ Q A + + +N + +
Sbjct: 1612 QTTPKNEAGSSLLVEQVQQVLQEDDAQQSAGMTIEDEDYSNQQAAAAVENANS 1664
>gi|167828840|ref|ZP_02460311.1| hypothetical protein Bpseu9_34454 [Burkholderia pseudomallei 9]
gi|167915589|ref|ZP_02502680.1| hypothetical protein Bpse112_34231 [Burkholderia pseudomallei 112]
Length = 456
Score = 36.8 bits (83), Expect = 2.9, Method: Composition-based stats.
Identities = 21/171 (12%), Positives = 51/171 (29%), Gaps = 5/171 (2%)
Query: 83 DRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGIS 142
+R + E R+ S+ ++ A L + D+ ++ ++
Sbjct: 113 EREPSLRWRGDEQTEENRAERSEHVPDVRADAFLDRCLKIRDRAVAAEPAARDDARDRGQ 172
Query: 143 FAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVR---NRVIANWNIPSDFKRF 199
+ + R E+ ++ + ++ + W + + R
Sbjct: 173 HPGGEDRERFEERAAGPEIRAREAARVTTEPVAGSEQQRMQDGSGDHVRAWAVRAGRMRE 232
Query: 200 KKLRVKMHFQLNQKGFVLGKINVDVVGGTEL-VRRMLRENARKAVIK-SQA 248
+ + L G + D G R++ ENAR+ V +
Sbjct: 233 ARRAAAVDGALTMDGSRSTAVRGDAGGPPRSRTHRIIAENARRRVRAGCRP 283
>gi|116747939|ref|YP_844626.1| TonB family protein [Syntrophobacter fumaroxidans MPOB]
gi|116697003|gb|ABK16191.1| TonB family protein [Syntrophobacter fumaroxidans MPOB]
Length = 283
Score = 36.8 bits (83), Expect = 2.9, Method: Composition-based stats.
Identities = 29/263 (11%), Positives = 63/263 (23%), Gaps = 25/263 (9%)
Query: 1 MRLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSK----YKK 56
MRL L IS++ H+ + + + + P E+ +
Sbjct: 1 MRLWQNLTISILGHLGV-ACVLWATPLAIYRPPPWMEVRLISPADFHGRAEIPCDGNGAG 59
Query: 57 IEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALL 116
P + V ++ ++ K + S ++
Sbjct: 60 EGGPAADDNIHAAPKEVCAVKQLPPPEQRPEEPKLEPPVRNRSVKKEKPPAKPKGASRVV 119
Query: 117 RMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKR---- 172
+ D Q+ + + SI S +
Sbjct: 120 PLAAIRADAQRPADPAESSAGEGAAAAGSHASIGPGTFASGTPSGGSVDAGAGAGSLSPG 179
Query: 173 IPSQDAIAI---------VRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVD 223
P + + V + + + V + +++KG + +
Sbjct: 180 GPGEGVVDARFGAANGPRFHRLVKPRYPSVARQLGKEG-TVVLRVTIDEKGRAIHVEVLT 238
Query: 224 VVGGTELVRRMLRENARKAVIKS 246
G E A AV +S
Sbjct: 239 RAGSG------FEEEAILAVRES 255
>gi|311105152|ref|YP_003978005.1| TonB family C-terminal domain-containing protein 2 [Achromobacter
xylosoxidans A8]
gi|310759841|gb|ADP15290.1| TonB family C-terminal domain protein 2 [Achromobacter xylosoxidans
A8]
Length = 269
Score = 36.8 bits (83), Expect = 2.9, Method: Composition-based stats.
Identities = 33/245 (13%), Positives = 66/245 (26%), Gaps = 20/245 (8%)
Query: 1 MRLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP 60
+R GL + + LH + ++ + + M+SV + ++ E
Sbjct: 18 IRAGAGLTV-LALHAAVIGAIFMAPENRPELEEPEAIMVSVVDAPIPQIAKAEPTPEEPQ 76
Query: 61 VVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPV 120
V + + E + + + K + + P
Sbjct: 77 PVTETPPEPQPEIEPEPEPEPELKPEPEPEPEPEPVVEKPPMPAPKPKPKPPPKPKPKPE 136
Query: 121 SPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIA 180
D + K + G + P + +L + R +A
Sbjct: 137 PKQDVKVEPKPDAPKAPPSGAPEGTQAPQGPQQGPPPDQPVLVSSIEFQGARPMPNYPMA 196
Query: 181 IVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENAR 240
R R ++ RV + ++N +G V G L E+A
Sbjct: 197 SRRMR--------------EEGRVVVLVEINTQGLVERATIDASSG-----FPRLDESAL 237
Query: 241 KAVIK 245
A K
Sbjct: 238 AAARK 242
>gi|304413090|ref|ZP_07394563.1| cytoplasmic membrane protein linking inner and outer membranes
[Candidatus Regiella insecticola LSR1]
gi|304283933|gb|EFL92326.1| cytoplasmic membrane protein linking inner and outer membranes
[Candidatus Regiella insecticola LSR1]
Length = 237
Score = 36.8 bits (83), Expect = 2.9, Method: Composition-based stats.
Identities = 33/241 (13%), Positives = 73/241 (30%), Gaps = 43/241 (17%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLL-VPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQF 64
+ S+ LH + LL + F +P + L++ + N + ++
Sbjct: 15 SVIFSIGLHGSLIGLLLYFFTRDNPVLPTTNSAPLAITMVNNSTFITAPQGTTTG----A 70
Query: 65 KGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYD 124
+ S E S +N + K + + +
Sbjct: 71 EKSQHEQAETISSAPKNVSKLQHLVKPVQQALKPTLTQPKVKKSETI------------- 117
Query: 125 KQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRN 184
K + + N+ IS A + + T LLS+ R
Sbjct: 118 --KTNPSMNEPAPNSLISKAGSEQLPTASTTLKTPSLLSEP-----------------RA 158
Query: 185 RVIANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAV 243
+ P+ + + RV++ + +++ G+V+ ++ R + +KAV
Sbjct: 159 LIKTKPVYPARAQALGIEGRVRIQYDIDKNGYVINLRILEATP-----RNIFEREVKKAV 213
Query: 244 I 244
Sbjct: 214 K 214
>gi|226952118|ref|ZP_03822582.1| conserved hypothetical protein [Acinetobacter sp. ATCC 27244]
gi|226837146|gb|EEH69529.1| conserved hypothetical protein [Acinetobacter sp. ATCC 27244]
Length = 113
Score = 36.8 bits (83), Expect = 2.9, Method: Composition-based stats.
Identities = 14/90 (15%), Positives = 28/90 (31%), Gaps = 12/90 (13%)
Query: 182 VRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARK 241
++ W +P R L+ G VL + ++ + E A +
Sbjct: 34 FEQKIYRAWTMPLGSSGQ---RASARVTLSDNGAVLSVVV----TASDPDVKASVEAAIR 86
Query: 242 AVIKSQAFRLS--PSTYKSWRNITLFFVPS 269
A + + + P + R+ T F
Sbjct: 87 A---AAPYPMPEDPDARREARSFTSNFTAK 113
>gi|169610587|ref|XP_001798712.1| hypothetical protein SNOG_08399 [Phaeosphaeria nodorum SN15]
gi|160702104|gb|EAT84675.2| hypothetical protein SNOG_08399 [Phaeosphaeria nodorum SN15]
Length = 1203
Score = 36.8 bits (83), Expect = 2.9, Method: Composition-based stats.
Identities = 20/158 (12%), Positives = 50/158 (31%), Gaps = 11/158 (6%)
Query: 44 IYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSS 103
+ DY + + + ++ +QE L D + + T+
Sbjct: 17 VTTTDYTND--AQHDSATIEDGAEAQEELPSDADEETRLKFLTTGTRAQDDL-------- 66
Query: 104 SKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLS 163
+ + + LL DK++I KA + + + K + + K +L
Sbjct: 67 -ERDIGRQADKLLTEQADARDKKRIEKAEAEAKRAEAAIQKIKNRLSLPALDTQKAKLRG 125
Query: 164 KVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKK 201
++ +K + ++ R+ +P +
Sbjct: 126 EIAMHRQKIDELDAEMDAIQQRINDRHTVPGGDEDDGN 163
>gi|24639818|ref|NP_726978.1| rugose, isoform B [Drosophila melanogaster]
gi|22831721|gb|AAN09135.1| rugose, isoform B [Drosophila melanogaster]
Length = 3522
Score = 36.8 bits (83), Expect = 2.9, Method: Composition-based stats.
Identities = 16/173 (9%), Positives = 45/173 (26%), Gaps = 13/173 (7%)
Query: 29 LLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQ 88
L P + SV+ + + K E +E + +Q
Sbjct: 1443 LKKPEDPKGHSSVE-------------PKTPNLEEPKPQETEQQKSQEVAEELPQKPEEQ 1489
Query: 89 TKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKS 148
+ + A +++ Q ++ + + + +
Sbjct: 1490 VVAIVNQVLDTLVDDTVKAVAAEQTTQTSPAPEEQSPQILAMESPATSVRVKPTEVDSTT 1549
Query: 149 IDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKK 201
T L+ +V++ ++ Q A + + +N + +
Sbjct: 1550 QTTPKNEAGSSLLVEQVQQVLQEDDAQQSAGMTIEDEDYSNQQAAAAVENANS 1602
>gi|326678006|ref|XP_002666143.2| PREDICTED: NCK-interacting protein with SH3 domain-like, partial
[Danio rerio]
Length = 805
Score = 36.8 bits (83), Expect = 2.9, Method: Composition-based stats.
Identities = 11/105 (10%), Positives = 22/105 (20%)
Query: 25 FNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDR 84
P + D + + P Q S D S++ +
Sbjct: 284 LPSVSSTPPPVPKRGKAPPPPPPDQSPQEEPVKKSPAPQPIRSQAPPPPPDLSIKTLTPQ 343
Query: 85 FSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKIS 129
+ +K S + + P +S
Sbjct: 344 PISSQAPPPPTDLSKESPVPQPMGLQPAAEPHPEVEWPLAPPPVS 388
>gi|307191175|gb|EFN74872.1| Gamma-tubulin complex component 6 [Camponotus floridanus]
Length = 1453
Score = 36.8 bits (83), Expect = 2.9, Method: Composition-based stats.
Identities = 19/145 (13%), Positives = 46/145 (31%)
Query: 59 EPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRM 118
+ + +L+ ++ +R + A + R + + E K R
Sbjct: 558 KREGEAALGPIVSLLSATQDEKKAERKRAELVIRAQQETLSRLNKQRQELIAKTVQRKRE 617
Query: 119 PVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDA 178
+ Q A KE+ + A+K ++ ++ + E+ +
Sbjct: 618 LLQELKHQAEESALFKEKKKEIEMLADKLLLEKFDREQEEIREQQQAEREHLINYYEKLN 677
Query: 179 IAIVRNRVIANWNIPSDFKRFKKLR 203
+ NR+ +NW K++
Sbjct: 678 TDLESNRIRSNWRKMRMSHFEKRVE 702
>gi|296213995|ref|XP_002753526.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 3
[Callithrix jacchus]
Length = 1012
Score = 36.8 bits (83), Expect = 2.9, Method: Composition-based stats.
Identities = 16/166 (9%), Positives = 44/166 (26%), Gaps = 2/166 (1%)
Query: 26 NVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRF 85
+ P +++ I +++ S + +
Sbjct: 270 PTAQMSPPPIEVDENIELISDQNERMGPLNISTPVEPVAPSKSDVSPIIQPVPTIKNVPQ 329
Query: 86 SDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKI--SKATNKEQDLQGISF 143
D+TK A + + S+ + S + + + S + +
Sbjct: 330 IDRTKKPAVKLPEEHRIKSESTNHEQPSPQNGKVIPDRSTKPVVSSPTLLLTDEEKARIH 389
Query: 144 AEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIAN 189
AE + + + + E+ + + Q+ A + N
Sbjct: 390 AETALLMEKSKQEKELRERQQGEQKEKLKREEQEQKAKKKQEAEEN 435
>gi|261254559|ref|ZP_05947092.1| cell envelope integrity inner membrane protein TolA [Escherichia
coli O157:H7 str. FRIK966]
Length = 349
Score = 36.8 bits (83), Expect = 2.9, Method: Composition-based stats.
Identities = 15/124 (12%), Positives = 46/124 (37%), Gaps = 3/124 (2%)
Query: 2 RLENGLAISMILHVMFLLLLYF-NFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP 60
+L+ + IS +LHV+ L + +F+ + S+D + + + K +
Sbjct: 10 KLKRAIIISAVLHVILFAALIWSSFDENIEASAGGGGGSSIDAVMVDSGAVVEQYKRMQS 69
Query: 61 VVQFKGS--SQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRM 118
Q + + +E ++ + + + + + ++ + +QA + + +
Sbjct: 70 QESSAKRSDEQRKMKEQQAAEELREKQAAEQERLKQLEKERLAAQEQKKQAEEAAKQAEL 129
Query: 119 PVSP 122
Sbjct: 130 KQKQ 133
>gi|229826186|ref|ZP_04452255.1| hypothetical protein GCWU000182_01558 [Abiotrophia defectiva ATCC
49176]
gi|229789056|gb|EEP25170.1| hypothetical protein GCWU000182_01558 [Abiotrophia defectiva ATCC
49176]
Length = 399
Score = 36.8 bits (83), Expect = 2.9, Method: Composition-based stats.
Identities = 21/167 (12%), Positives = 48/167 (28%), Gaps = 11/167 (6%)
Query: 1 MRLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP 60
M+L +G S+ + FN L+ ++ E + + I + ++
Sbjct: 242 MKLASGGENSLAV--------IFNLPGILVHGLTTDEP-ADEMIEVAVESALAVCGNDKL 292
Query: 61 VVQFKGSSQENLV--RDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRM 118
+++ + Q+ D V++ +K EQ
Sbjct: 293 IIKAEKEEQDETENIADKKVEKLKSGIKRVSKERLARTGKDIKIEKSKEQNPVPVVDENK 352
Query: 119 PVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKV 165
++ +K E D I A ++ K + +
Sbjct: 353 EITRIPPKKAQPKQMVEDDDDEILNALNHFFNSKKEEEGKLKRGKRK 399
>gi|226330929|ref|ZP_03806447.1| hypothetical protein PROPEN_04852 [Proteus penneri ATCC 35198]
gi|225201724|gb|EEG84078.1| hypothetical protein PROPEN_04852 [Proteus penneri ATCC 35198]
Length = 111
Score = 36.8 bits (83), Expect = 2.9, Method: Composition-based stats.
Identities = 14/120 (11%), Positives = 35/120 (29%), Gaps = 10/120 (8%)
Query: 149 IDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHF 208
D ++ I V+ + + P +K ++
Sbjct: 2 ADGNKQSGAAAAGQGGGNRTGANNAGVATYIGQVKTAIEQKFIDPELYKGR---TCELKV 58
Query: 209 QLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPSTYKSWRNITLFFVP 268
+ G ++ V G + L + A +A ++ + Y+ ++ + F P
Sbjct: 59 SIAPDGLLISAKVV----GGDP---SLCQVALRAANTAKLPKPPKDVYEQVKSSVIEFKP 111
>gi|288817562|ref|YP_003431909.1| TonB family protein [Hydrogenobacter thermophilus TK-6]
gi|288786961|dbj|BAI68708.1| TonB family protein [Hydrogenobacter thermophilus TK-6]
gi|308751164|gb|ADO44647.1| TonB family protein [Hydrogenobacter thermophilus TK-6]
Length = 252
Score = 36.8 bits (83), Expect = 3.0, Method: Composition-based stats.
Identities = 35/234 (14%), Positives = 72/234 (30%), Gaps = 20/234 (8%)
Query: 22 YFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQEN 81
F L LS+ + ++Y + +K + K E + S+
Sbjct: 23 ILLFGEALKYKKVVEIDLSLQSQELQNYTEAPHK-------EDKKHRSEEKHSERSIHRE 75
Query: 82 GDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGI 141
+ Q A E++ +S E + + S + + +K L
Sbjct: 76 VKEQAVQKNQKA--KESRVQNSQMQETPKESGQESKGLESKETHNHVGEGLSKTGGLSSE 133
Query: 142 SFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFK- 200
K T R + + + ++ ++++ + V + + P ++
Sbjct: 134 QGTTKGQESTSTNRGKDAKEEREASPEA----YLREKLSVISSIVQKHISYPLIARKMGW 189
Query: 201 KLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQA-FRLSP 253
+ RV + F L G V G +L ++A V K F P
Sbjct: 190 EGRVVVCFLLRSDGRVENVHVEKSSG-----YEILDKSAVSTVQKVSGLFPKPP 238
>gi|254779679|ref|YP_003057785.1| hypothetical protein HELPY_1100 [Helicobacter pylori B38]
gi|254001591|emb|CAX29652.1| Conserved hypothetical protein; putative signal peptide
[Helicobacter pylori B38]
Length = 273
Score = 36.8 bits (83), Expect = 3.0, Method: Composition-based stats.
Identities = 15/176 (8%), Positives = 55/176 (31%)
Query: 40 SVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETK 99
V ++ ED S++ K + + ++ + ++ + +E + + +
Sbjct: 47 QVIDLNLEDLPSNEKKDEKIAEKAEEKKDEKVVEKNATDKEGDFIDPKEQEESLENIFSS 106
Query: 100 RSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKK 159
+ + + + + K + K Q Q + ++++D + +
Sbjct: 107 LNDFQEKTDTNAQKDEQKNEQEEQRRLKEQQRLRKNQKNQEMLKGLQQNLDQFAQKLESV 166
Query: 160 ELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGF 215
+ + + ++ + A ++ + K V + + G
Sbjct: 167 KNKTLDLQIPKQDGVDEKAYQEWYAQIYQILYKGWKGVFYHKASVSALIMITKDGE 222
>gi|225849978|ref|YP_002730212.1| TonB family C- domain protein [Persephonella marina EX-H1]
gi|225644882|gb|ACO03068.1| TonB family C- domain protein [Persephonella marina EX-H1]
Length = 292
Score = 36.8 bits (83), Expect = 3.0, Method: Composition-based stats.
Identities = 30/254 (11%), Positives = 83/254 (32%), Gaps = 14/254 (5%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
GL +S++LH+ +L + + + + KKI + + K
Sbjct: 14 GLVVSVLLHMSVFAVLISIERKKEKEEEKPIYVYLSEFKEEKKKAPQSEKKIPKKSEKPK 73
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
+ + ++ + K + + E+ ++ +P Y +
Sbjct: 74 PKPKVKKKVVKKPVKKPEKKVVKKKIRKEVIKPVKKPEKIVEKEPEKIEKKALPDIVYQE 133
Query: 126 QKISKATNKE--QDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVR 183
++ + ++ ++ +++ + + K+E+ ++ + S + I
Sbjct: 134 DELLEEIDQIVFEEDIPEFSPKEEEVLDLSKLEGKEEIFQPGKEEKVEEEVSDEDILAYI 193
Query: 184 NRVIANWNIPSDFKR-----FKKLRVK----MHFQLNQKGFVLGKINVDVVGGTELVRRM 234
+ N + + K+LR++ + F + G V + +
Sbjct: 194 KELEMYLNNLARKRDLYPPLAKRLRIEGSLIIRFTILSDGSVDNDSIKIISSSG---YNV 250
Query: 235 LRENARKAVIKSQA 248
L + ARK + K
Sbjct: 251 LDKGARKLIEKYVP 264
>gi|291085673|ref|ZP_06353705.2| protein TolA [Citrobacter youngae ATCC 29220]
gi|291070095|gb|EFE08204.1| protein TolA [Citrobacter youngae ATCC 29220]
Length = 400
Score = 36.8 bits (83), Expect = 3.0, Method: Composition-based stats.
Identities = 14/116 (12%), Positives = 39/116 (33%), Gaps = 1/116 (0%)
Query: 2 RLENGLAISMILHVMFLLLLYF-NFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP 60
+L+ + IS +LHV+ L + +F+ + S+D + + + ++
Sbjct: 10 KLKRAIIISAVLHVILFAALIWSSFDEHIDASAGGGGGSSIDAVMVDPGAVVQQYDRQQQ 69
Query: 61 VVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALL 116
++E + Q R + + K +++ + +
Sbjct: 70 QQASAKRAEEQREKQAQQQAEELREKQAAEQERLKQLEKERLAAQEKVREQAEQQK 125
>gi|156093940|ref|XP_001613008.1| serine-repeat antigen 4 (SERA) [Plasmodium vivax SaI-1]
gi|1381089|gb|AAB41486.1| V-SERA 4 [Plasmodium vivax]
gi|148801882|gb|EDL43281.1| serine-repeat antigen 4 (SERA) [Plasmodium vivax]
Length = 1231
Score = 36.8 bits (83), Expect = 3.0, Method: Composition-based stats.
Identities = 20/142 (14%), Positives = 47/142 (33%), Gaps = 4/142 (2%)
Query: 28 QLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSD 87
PI + VD D + EP+ Q + + + Q G+ +
Sbjct: 119 PTDQPIDQPTDQPVD--QTTDQT--TEQPAGEPLTQSTDEPVDQPLTQSTDQPAGEPLTQ 174
Query: 88 QTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKK 147
T A E T+ + + A + + + ++ + ++ Q ++
Sbjct: 175 STDQPAGEPLTQSTDQPADQPADQSADQPVDQTTDQVTEQPTDQPTEQPTDQTTDQPTEQ 234
Query: 148 SIDTVVVRPDKKELLSKVEKSS 169
D + +P + L + ++S
Sbjct: 235 PTDEPLTQPTDEPLPQPIVEAS 256
>gi|283479097|emb|CAY75013.1| Protein tolA [Erwinia pyrifoliae DSM 12163]
Length = 440
Score = 36.8 bits (83), Expect = 3.0, Method: Composition-based stats.
Identities = 17/125 (13%), Positives = 35/125 (28%), Gaps = 15/125 (12%)
Query: 147 KSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKM 206
K+ + +K+ + V+ + + + D F +
Sbjct: 328 KNAPKSGKAGGAAAGQGQQKKAGASGAAIDSYLGQVKGAIQSKF---YDADTFAGKTCDV 384
Query: 207 HFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPSTYKSW---RNIT 263
+L G ++ G + + AR A PS + W + T
Sbjct: 385 RIKLGPDGLLISA---TAASGDAALCQAAINAARMA-----KIPKPPSQ-EVWQVIKEAT 435
Query: 264 LFFVP 268
+ F P
Sbjct: 436 IEFKP 440
>gi|259909071|ref|YP_002649427.1| cell envelope integrity inner membrane protein TolA [Erwinia
pyrifoliae Ep1/96]
gi|224964693|emb|CAX56210.1| uncharacterized protein [Erwinia pyrifoliae Ep1/96]
Length = 440
Score = 36.8 bits (83), Expect = 3.0, Method: Composition-based stats.
Identities = 17/125 (13%), Positives = 35/125 (28%), Gaps = 15/125 (12%)
Query: 147 KSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKM 206
K+ + +K+ + V+ + + + D F +
Sbjct: 328 KNAPKSGKAGGAAAGQGQQKKAGASGAAIDSYLGQVKGAIQSKF---YDADTFAGKTCDV 384
Query: 207 HFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPSTYKSW---RNIT 263
+L G ++ G + + AR A PS + W + T
Sbjct: 385 RIKLGPDGLLISA---TAASGDAALCQAAINAARMA-----KIPKPPSQ-EVWQVIKEAT 435
Query: 264 LFFVP 268
+ F P
Sbjct: 436 IEFKP 440
>gi|163783511|ref|ZP_02178502.1| predicted repair protein [Hydrogenivirga sp. 128-5-R1-1]
gi|159881275|gb|EDP74788.1| predicted repair protein [Hydrogenivirga sp. 128-5-R1-1]
Length = 231
Score = 36.8 bits (83), Expect = 3.0, Method: Composition-based stats.
Identities = 26/125 (20%), Positives = 43/125 (34%), Gaps = 5/125 (4%)
Query: 8 AISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGS 67
IS++++++ L LL F V++ + VD E K + V S
Sbjct: 13 VISILINLIMLSLLATVFIVKVKETPEIYPLRVVDIRELEVK-----KPKRQRSVVKAKS 67
Query: 68 SQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQK 127
+ + V R T T A E + K E +AL + S ++K
Sbjct: 68 TAKKTVSKTRKGTAAKRKVGATVTKAHEKGDVKVPVQKEEDVSILAALEKKIESRLKREK 127
Query: 128 ISKAT 132
K
Sbjct: 128 TQKKE 132
>gi|47575780|ref|NP_001001234.1| peptidylprolyl isomerase G [Xenopus (Silurana) tropicalis]
gi|45708892|gb|AAH67931.1| peptidyl-prolyl isomerase G (cyclophilin G) [Xenopus (Silurana)
tropicalis]
Length = 736
Score = 36.8 bits (83), Expect = 3.0, Method: Composition-based stats.
Identities = 29/201 (14%), Positives = 67/201 (33%), Gaps = 9/201 (4%)
Query: 47 EDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKG 106
+ + K + + + SS + V + Q+ K+ + E + K+ + +
Sbjct: 376 KSEMNDKDNQKSPVRGRERKSSDQRPVSESPSQKGDREKQKDHKSASKERDLKKDAEKEE 435
Query: 107 EQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVE 166
S+ + ++ SK+ + + A KS + + +K K +
Sbjct: 436 RPNKSRSSKRTRSERRSESKENSKSNKDSKHSKHDVKARSKSKERAHEKGKEKNSSDKAK 495
Query: 167 KSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVG 226
+ R + R RV + + K ++ + + ++
Sbjct: 496 EKDRSKS---------RERVKHSSSKNERAKSKEREKTRERQGKSRSRERESARTKHGSN 546
Query: 227 GTELVRRMLRENARKAVIKSQ 247
R REN+R+A +SQ
Sbjct: 547 SRAKERSKSRENSRRARSRSQ 567
>gi|195158443|ref|XP_002020095.1| GL13803 [Drosophila persimilis]
gi|194116864|gb|EDW38907.1| GL13803 [Drosophila persimilis]
Length = 1072
Score = 36.8 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 10/118 (8%), Positives = 41/118 (34%), Gaps = 1/118 (0%)
Query: 31 VPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTK 90
P ++ E+ + + +E+ + + ++ + + + + N TK
Sbjct: 193 PPPTKPEINDAEEVSDEELPAPQRAELPADA-EVISEDELPSNNNNNNNNNAGEPKTSTK 251
Query: 91 THATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKS 148
A + + + + + +++ + ++ V Y+ + +N + +
Sbjct: 252 RKAEKEQAEEAKDNAEQKSSEATSTREKSVEQYNPGSPTTESNDAPPSEKRPKVDDAE 309
>gi|169796047|ref|YP_001713840.1| hypothetical protein ABAYE1973 [Acinetobacter baumannii AYE]
gi|213157220|ref|YP_002319265.1| hypothetical protein AB57_1904 [Acinetobacter baumannii AB0057]
gi|215483504|ref|YP_002325721.1| hypothetical protein ABBFA_001818 [Acinetobacter baumannii
AB307-0294]
gi|260555088|ref|ZP_05827309.1| conserved hypothetical protein [Acinetobacter baumannii ATCC 19606]
gi|332851696|ref|ZP_08433621.1| hypothetical protein HMPREF0021_01193 [Acinetobacter baumannii
6013150]
gi|332865929|ref|ZP_08436709.1| hypothetical protein HMPREF0020_00315 [Acinetobacter baumannii
6013113]
gi|169148974|emb|CAM86851.1| hypothetical protein; putative exported protein [Acinetobacter
baumannii AYE]
gi|213056380|gb|ACJ41282.1| hypothetical protein AB57_1904 [Acinetobacter baumannii AB0057]
gi|213988819|gb|ACJ59118.1| hypothetical protein ABBFA_001818 [Acinetobacter baumannii
AB307-0294]
gi|260411630|gb|EEX04927.1| conserved hypothetical protein [Acinetobacter baumannii ATCC 19606]
gi|332729703|gb|EGJ61038.1| hypothetical protein HMPREF0021_01193 [Acinetobacter baumannii
6013150]
gi|332734979|gb|EGJ66065.1| hypothetical protein HMPREF0020_00315 [Acinetobacter baumannii
6013113]
Length = 124
Score = 36.8 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 16/111 (14%), Positives = 36/111 (32%), Gaps = 11/111 (9%)
Query: 161 LLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKI 220
L + + ++ + ++ WN+P + + L+ G + I
Sbjct: 23 LSPAKSDDDKIIVEAEKYKQQYQKKIFKIWNVPPSSVG---MSASVKVFLSDTGEIEQII 79
Query: 221 NVDVVGGTELVRRMLRENARKAVIKSQAFRLS--PSTYKSWRNITLFFVPS 269
+D + + + KA+ ++ F L P K R + F
Sbjct: 80 FLDKE------DQKFKSSIEKAIWRASPFVLPSNPEVRKQVRKFNIKFTAK 124
>gi|148672623|gb|EDL04570.1| E1A binding protein p300 [Mus musculus]
Length = 2336
Score = 36.8 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 25/167 (14%), Positives = 46/167 (27%), Gaps = 3/167 (1%)
Query: 28 QLLVPISRREMLS-VDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFS 86
P +M S ++ E + E K E R ++ +G
Sbjct: 929 PEKQPSQEVKMESKMEVDKPEPADAQPEDTKEAKGEDVKVEPTEMEERGPELKTDGKEEE 988
Query: 87 DQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEK 146
+Q T AT++ S K +E MP ++ ++ Q +
Sbjct: 989 EQPSTSATQSSPAPGQSKKKIFKPEELRQALMPTLEALYRQDPESLPFRQPVDPQLLGIP 1048
Query: 147 KSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIP 193
D V D + K++ + I + W
Sbjct: 1049 DYFDIVKSPMDLSTIKRKLDTGQYQEPW--QYIDDIWLMFNNAWLYN 1093
>gi|93100137|emb|CAJ90747.1| TonB1 protein [Listonella anguillarum]
Length = 240
Score = 36.8 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 20/168 (11%), Positives = 42/168 (25%), Gaps = 5/168 (2%)
Query: 78 VQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQD 137
Q +Q + ++ K + DK T Q
Sbjct: 51 AQPQAQVLQEQATKTPPPEKRANKPKPAKKEPQKVVQQKSLSKPVVDKPAPKIPTKSAQV 110
Query: 138 LQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFK 197
+ A S++ + + + P R K
Sbjct: 111 QTPVKEAVTSSVENENSAESTPKTAATPSSNGATNQPKLVDAPSFVTRPAPPVYPRLAQK 170
Query: 198 RFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIK 245
R + L++ G + ++ + G +L E+A A+ +
Sbjct: 171 RGIEGVAMYEVWLDENGRQIKQVLLSSSGAA-----LLDESALNAIKQ 213
>gi|161958|gb|AAB97874.1| surface antigen [Trypanosoma cruzi]
Length = 722
Score = 36.8 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 11/157 (7%), Positives = 33/157 (21%), Gaps = 2/157 (1%)
Query: 23 FNFNVQLLVP--ISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQE 80
+ P S SV+++ K + + V +
Sbjct: 230 VSLPFTEKKPAKASTATSPSVEHVTTPVATEPKSAEPKSAVPKSAEPKSAVPKSAEPKSA 289
Query: 81 NGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQG 140
++ + S ++ + + P + S +
Sbjct: 290 EPKSAEPKSAVPKSAEPKSAVPKSAEPKSAEPKSAEPKSAEPKSAEPKSAEPKSAEPKSA 349
Query: 141 ISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQD 177
+ + + K S + ++
Sbjct: 350 VPKSAEPKSAEPKSAVPKSAEPKSAVPKSAEPKSAEP 386
>gi|85858071|ref|YP_460273.1| tonB periplasmic protein [Syntrophus aciditrophicus SB]
gi|85721162|gb|ABC76105.1| tonB periplasmic protein [Syntrophus aciditrophicus SB]
Length = 305
Score = 36.8 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 30/260 (11%), Positives = 72/260 (27%), Gaps = 17/260 (6%)
Query: 10 SMILHVMFLLLLYFNFNVQLLV-PISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSS 68
S++LH + +LL+ + + + SV + S K + +Q SS
Sbjct: 54 SLVLHALAILLVITAVAMHSVSGKAKKAPGFSVSLVNLSSPVSGKPVQQPGNRIQGLDSS 113
Query: 69 QENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKI 128
+ + + + + ++ + + A
Sbjct: 114 ASEVKKIQKSKSKFLGKPPDAPSLLDTEAVRNKTNIIRDAKVIAPAGSNPQSDGSVVALQ 173
Query: 129 SKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIA 188
+ D K S+ S + V
Sbjct: 174 ATTPATAAGTAAKFQEGGSMSPGSAGENDDKREESRGTLRSAASRYGHAPLP-----VYP 228
Query: 189 NWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQA 248
+ ++ V + ++ + G G++ V G +L + A AV K +
Sbjct: 229 HIARQKGYEG----VVLISVEILENGSP-GQLLVKKSSG----YAILDQAALNAVKKWKF 279
Query: 249 FRLSPS--TYKSWRNITLFF 266
+ + ++W ++ + F
Sbjct: 280 YPAIKNNVRIRTWGDVPIRF 299
>gi|330828306|ref|YP_004391258.1| TolA protein [Aeromonas veronii B565]
gi|328803442|gb|AEB48641.1| TolA protein [Aeromonas veronii B565]
Length = 377
Score = 36.8 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 15/140 (10%), Positives = 45/140 (32%), Gaps = 12/140 (8%)
Query: 132 TNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWN 191
+++ + +K+ + + + + S+ + A+++ V
Sbjct: 247 AERKRKAAEQAKLQKEMEEMMQQQLSAEANARSQAASAAAQGEVDKYAALIKATVERYMI 306
Query: 192 IPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRL 251
+ + + +L GFV+ + + + AV+K+ +
Sbjct: 307 LDPTMRGK---TCTIGVRLASSGFVISV-------DNGQGDPAVCRSGKAAVLKANQLPV 356
Query: 252 S--PSTYKSWRNITLFFVPS 269
P+ ++ + L PS
Sbjct: 357 PKDPAAFEMLKEFNLKLEPS 376
>gi|296121961|ref|YP_003629739.1| 60 kDa inner membrane insertion protein [Planctomyces limnophilus
DSM 3776]
gi|296014301|gb|ADG67540.1| 60 kDa inner membrane insertion protein [Planctomyces limnophilus
DSM 3776]
Length = 699
Score = 36.8 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 16/202 (7%), Positives = 49/202 (24%), Gaps = 7/202 (3%)
Query: 15 VMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVR 74
+ L+ F ++ ++ + + + E + N++
Sbjct: 10 IALSALVIFGWSGFVMPMLFPPPPKAEKLAEKAPEDQAADIAKPEELQPADALVPANVIA 69
Query: 75 DFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNK 134
N Q K + + + V + +
Sbjct: 70 KAGADANQPEAPAQEKVVEPPKLQSFPNRQILLGSTNPDEPFFLAVKLNSRGGSIETIEL 129
Query: 135 EQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPS 194
K + V P K + V + R + +++ ++ W +
Sbjct: 130 NDPRYRSLDDSSKPVKVVGDDPLLKLKTTDVTIEAIDRQLAALGLSL--AKID--WEVVP 185
Query: 195 DFKRFKKLRVKMHFQLNQKGFV 216
+ + + + + G +
Sbjct: 186 GSESPEGVTFRFT---SPDGSI 204
>gi|220920570|ref|YP_002495871.1| Sel1 domain-containing protein repeat-containing protein
[Methylobacterium nodulans ORS 2060]
gi|219945176|gb|ACL55568.1| Sel1 domain protein repeat-containing protein [Methylobacterium
nodulans ORS 2060]
Length = 370
Score = 36.8 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 18/219 (8%), Positives = 44/219 (20%), Gaps = 8/219 (3%)
Query: 32 PISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKT 91
P + +E S + + + V+ + + ++ +
Sbjct: 139 PDPIVTSIVAILPRSEKAGSIRTETLSTTVIIPEIKATKSPETVSTQPSAQPDNPPPPAL 198
Query: 92 HATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDT 151
K E P + + + A K+ +
Sbjct: 199 TPQPASQPTPKDDKPETPWLNPKSAEGKPKPDNTGEPTSAQLKQAPSTAEKTRDTAQDQA 258
Query: 152 VVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNR--------VIANWNIPSDFKRFKKLR 203
++R S A ++ + V +
Sbjct: 259 TASSQAPDTAAQAGPTTARDAGESALAKSLTQRAQQALRLGNVSGARLLLQRAASSGDAE 318
Query: 204 VKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKA 242
L + V + R + A +A
Sbjct: 319 ATFMLAQTYDESFLRHLGVRGLKADPEQARTYYDAAARA 357
>gi|90423023|ref|YP_531393.1| hypothetical protein RPC_1512 [Rhodopseudomonas palustris BisB18]
gi|90105037|gb|ABD87074.1| Tetratricopeptide TPR_2 [Rhodopseudomonas palustris BisB18]
Length = 1261
Score = 36.8 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 8/137 (5%), Positives = 31/137 (22%)
Query: 35 RREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHAT 94
+ VD + + + + + + + + +
Sbjct: 272 EEKNYIVDIGFQQSEPAQSLPAAISRLQSELRGVRASPPGEIAPPTSELIAQQMKSDPKP 331
Query: 95 ENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVV 154
+ + K E ++ + K + E ++ + + V
Sbjct: 332 AAKVEAKVEPKVEAKVEPKVEAKAEPKAEPKAEPKAQAKVEAKVEPKVEPKVEPKVEPKV 391
Query: 155 RPDKKELLSKVEKSSRK 171
P + + +
Sbjct: 392 EPKVEPKVEPKVEPKAG 408
>gi|291282274|ref|YP_003499092.1| outer membrane receptor-mediated transport energizer protein TonB
[Escherichia coli O55:H7 str. CB9615]
gi|209772184|gb|ACI84404.1| energy transducer TonB [Escherichia coli]
gi|290762147|gb|ADD56108.1| outer membrane receptor-mediated transport energizer protein TonB
[Escherichia coli O55:H7 str. CB9615]
gi|320659513|gb|EFX27082.1| transport protein TonB [Escherichia coli O55:H7 str. USDA 5905]
Length = 239
Score = 36.8 bits (83), Expect = 3.2, Method: Composition-based stats.
Identities = 19/225 (8%), Positives = 52/225 (23%), Gaps = 20/225 (8%)
Query: 8 AISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGS 67
+S+ +H + L F Q++ + + +SV + D + + V
Sbjct: 14 LLSVCIHGAVVAGLLFTSVHQVIELPAPAQPISVTMVAPADLEPPQAVQPPPEPVVEPEP 73
Query: 68 SQ--------------ENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKES 113
E + + + + + R +S A
Sbjct: 74 EPEPIPEPPKEAPVVIEKPKPKPKPKPKPVKKVQEQQKRDVKPVESRPASPFENTAPARP 133
Query: 114 ALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRI 173
+ + + + + + + K ++ + +I
Sbjct: 134 TSSTATAATSKPVTSVASGPRALSRNQPQYPARAQALRIEGQVKVKFDVTPDGRVDNVQI 193
Query: 174 PSQDAIAIVRNRVI---ANWNIPSDFKRFKKLRVKMHFQLNQKGF 215
S + V W + ++ G
Sbjct: 194 LSAKPANMFEREVKNAMRRWRYEPGKPGSG---IVVNILFKINGT 235
>gi|308804878|ref|XP_003079751.1| unnamed protein product [Ostreococcus tauri]
gi|116058208|emb|CAL53397.1| unnamed protein product [Ostreococcus tauri]
Length = 404
Score = 36.8 bits (83), Expect = 3.2, Method: Composition-based stats.
Identities = 22/174 (12%), Positives = 50/174 (28%), Gaps = 6/174 (3%)
Query: 91 THATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSID 150
++ + ++A S P + ++ K D G + +
Sbjct: 4 APDASAPPRKKPRTCKKKASAASEKKAPPKVEPEPERERCERTKANDAAGKISTRSSTKE 63
Query: 151 TVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQL 210
+ + Q +VR R S + + FQ
Sbjct: 64 APKAEKSNAFSTGSAPATRVAELTCQTTYDVVRARCGFCLKKKSMHINLYESSIVKLFQE 123
Query: 211 NQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPSTYKSWRNITL 264
+ K + + G + + +A +A++K+ F L +++ R T
Sbjct: 124 DPD----PKQALAWMQGNGVAYEV--RSALRALLKTNKFDLFTYLFETTREKTF 171
>gi|77358812|ref|YP_338504.1| hypothetical protein BMAA1601 [Burkholderia mallei ATCC 23344]
gi|66967610|gb|AAY59167.1| hypothetical protein BMAA1601 [Burkholderia mallei ATCC 23344]
Length = 452
Score = 36.8 bits (83), Expect = 3.2, Method: Composition-based stats.
Identities = 21/171 (12%), Positives = 51/171 (29%), Gaps = 5/171 (2%)
Query: 83 DRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGIS 142
+R + E R+ S+ ++ A L + D+ ++ ++
Sbjct: 112 EREPSLRWRGDEQTEENRAERSEHVPDVRADAFLDRCLKIRDRAVAAEPAGRDDARDRGQ 171
Query: 143 FAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVR---NRVIANWNIPSDFKRF 199
+ + R E+ ++ + ++ + W + + R
Sbjct: 172 HPGGEDRERFEERAAGPEIRAREAARVTTEPVAGSEQQRMQDGSGDHVRAWAVRAGRMRE 231
Query: 200 KKLRVKMHFQLNQKGFVLGKINVDVVGGTEL-VRRMLRENARKAVIK-SQA 248
+ + L G + D G R++ ENAR+ V +
Sbjct: 232 ARRAAAVDGALTMDGSRSTAVRGDAGGPPRSRTHRIIAENARRRVRAGCRP 282
>gi|222149279|ref|YP_002550236.1| hypothetical protein Avi_3101 [Agrobacterium vitis S4]
gi|221736263|gb|ACM37226.1| conserved hypothetical protein [Agrobacterium vitis S4]
Length = 365
Score = 36.8 bits (83), Expect = 3.2, Method: Composition-based stats.
Identities = 19/169 (11%), Positives = 45/169 (26%), Gaps = 1/169 (0%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
G+ S++LH + +L ++ Q + E++SV + K E +Q +
Sbjct: 8 GITASVLLHGLLVLAFLAHWPAQA-PDAPKEEVVSVSIEPPPEEKPQPEKPKPEKQLQLE 66
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
+ + + + + A + L +
Sbjct: 67 LKPEAKPKEAPAPAAPKAEEKKPEEKQEAKPPAPAPQQEPPKPADDKPQALESAPKDEEA 126
Query: 126 QKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIP 174
K + + + D PDK + + +
Sbjct: 127 PKEDAPPVPPPAEEPAAQTQSPPPDAPKAGPDKSAVGDPQKTEPPQPPA 175
>gi|291410334|ref|XP_002721441.1| PREDICTED: E1A binding protein p300-like [Oryctolagus cuniculus]
Length = 2418
Score = 36.8 bits (83), Expect = 3.2, Method: Composition-based stats.
Identities = 22/168 (13%), Positives = 43/168 (25%), Gaps = 3/168 (1%)
Query: 27 VQLLVPISRREMLS-VDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRF 85
V P ++ + ++ E E K E R ++
Sbjct: 966 VPEKQPAQEVKVEAKMEVDQPEPAAVPPEDVPESKAEDCKVEPPETEERGTELKTEIKED 1025
Query: 86 SDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAE 145
DQ T A ++ S K +E MP ++ ++ Q +
Sbjct: 1026 DDQPSTSAPQSSPAPGQSKKKIFKPEELRQALMPTLEALYRQDPESLPFRQPVDPQLLGI 1085
Query: 146 KKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIP 193
D V D + K++ + + + W
Sbjct: 1086 PDYFDIVKSPMDLSTIKRKLDTGQYQEPW--QYVDDIWLMFNNAWLYN 1131
>gi|154495349|ref|ZP_02034354.1| hypothetical protein PARMER_04406 [Parabacteroides merdae ATCC
43184]
gi|154085273|gb|EDN84318.1| hypothetical protein PARMER_04406 [Parabacteroides merdae ATCC
43184]
Length = 608
Score = 36.8 bits (83), Expect = 3.2, Method: Composition-based stats.
Identities = 13/160 (8%), Positives = 46/160 (28%), Gaps = 6/160 (3%)
Query: 4 ENGLAISMILHVMFLLLLYFNF----NVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEE 59
G+ IS+++ + F N P + V+ +D
Sbjct: 356 RKGMLISVLIAIFASAGSVVAFLVLGNKTSTKPDVTELISPVE--EEKDSIGIFQDTTVS 413
Query: 60 PVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMP 119
V + S+++ + ++ ++ + + + ++G + +
Sbjct: 414 EVKEASMLSEKDKKTEAAMARQPEKVTPVVVDEPRKQPDTKQVPAEGNKITIQPVQPTAE 473
Query: 120 VSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKK 159
+ + ++ + A+K + ++
Sbjct: 474 EIEAKYVALIASGKEKMGKADFTNAKKDFTKAKETKLTEE 513
>gi|17556955|ref|NP_499022.1| hypothetical protein ZK512.5 [Caenorhabditis elegans]
gi|466133|sp|P34643|YOQ5_CAEEL RecName: Full=Uncharacterized protein ZK512.5
gi|3881686|emb|CAA80146.1| C. elegans protein ZK512.5, partially confirmed by transcript
evidence [Caenorhabditis elegans]
Length = 1232
Score = 36.8 bits (83), Expect = 3.2, Method: Composition-based stats.
Identities = 15/166 (9%), Positives = 40/166 (24%), Gaps = 9/166 (5%)
Query: 30 LVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQT 89
PIS +S + + + + + S +V + +
Sbjct: 926 EKPISTPPPISKNVVPEMTPPAIVKPPMPTLSMPIPPVSTPIMVSPQPIPIPKPVDASIA 985
Query: 90 KTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSI 149
K+ +E + +S Q A + S + T + + +
Sbjct: 986 KSPRSELDDLWDTSPPSNQTSYPPAPRNIQPSYSPAPNFANPTAPSVPTPPPAVSSAPVL 1045
Query: 150 DTVVVRPDKKELLSKVEKSSRKR---------IPSQDAIAIVRNRV 186
+ ++ S+ ++ +V
Sbjct: 1046 QQATLGQASIPNAKTTAPPVPQKQPELALNERKASKGWFGSIKEKV 1091
>gi|302501324|ref|XP_003012654.1| hypothetical protein ARB_00904 [Arthroderma benhamiae CBS 112371]
gi|291176214|gb|EFE32014.1| hypothetical protein ARB_00904 [Arthroderma benhamiae CBS 112371]
Length = 1580
Score = 36.8 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 25/219 (11%), Positives = 58/219 (26%), Gaps = 25/219 (11%)
Query: 45 YNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSS 104
+ I Q QE ++ ++ D Q + A E E ++
Sbjct: 1098 NETKKAEEEALAIRAKEEQEAALRQEQQAQEAETEQLEDETRRQEEELAREKEAAQARLK 1157
Query: 105 KGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKE---- 160
E+ +++ + + +Q +A KE L + + + + E
Sbjct: 1158 ALEEQVRQGKIKKQEQKRRKQQAEQEAREKEAKLAAQRAELEAAQERERELQRQLESLGD 1217
Query: 161 LLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKM-------HFQLNQK 213
S + + +D +++V+ + + +
Sbjct: 1218 EESSSDDEGPGFVTPEDTTTPTQSQVLEEPKATIPSPALPEPVARPPPAPHIPEIITEED 1277
Query: 214 GF--------------VLGKINVDVVGGTELVRRMLREN 238
G V+ K V R L ++
Sbjct: 1278 GTQVFRPQSPEPIIHPVMSKPIVPETESRNPYFRQLSQS 1316
>gi|197123782|ref|YP_002135733.1| MJ0042 family finger-like protein [Anaeromyxobacter sp. K]
gi|196173631|gb|ACG74604.1| MJ0042 family finger-like protein [Anaeromyxobacter sp. K]
Length = 610
Score = 36.8 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 16/160 (10%), Positives = 37/160 (23%), Gaps = 3/160 (1%)
Query: 71 NLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISK 130
V + + + + + +K E A +P + +
Sbjct: 424 RKVAEAPARREPAPARPARREAPERAVREPTRVAKAEPTRVAKADAAPAPAPRKRDSVLD 483
Query: 131 ATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANW 190
+ + L K +V V P S ++ + V + +
Sbjct: 484 FESNDAALDAALGGTKPGARSVYVPPAPGGGALPDRVSD--SQVNETILGRVSS-LQQCV 540
Query: 191 NIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTEL 230
+KM + + G V +
Sbjct: 541 QEQKTRDPAASGVLKMRWAIAPDGSVQNAKCATPEYASGP 580
>gi|198432929|ref|XP_002122255.1| PREDICTED: similar to protein tyrosine phosphatase, receptor type,
J [Ciona intestinalis]
Length = 1010
Score = 36.8 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 11/147 (7%), Positives = 37/147 (25%), Gaps = 2/147 (1%)
Query: 29 LLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQ 88
I V+ + + + V+ + ++
Sbjct: 791 PEPVIEPPPAEPVETQTPAEPLVETPPAEPVIETPPADPVETQTPAEPVVEIPEEPITEP 850
Query: 89 TKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNK--EQDLQGISFAEK 146
++ + + + P D+ + E+ ++ I E
Sbjct: 851 PNEPEAPSDPIIETPIEPVIEPVIEPPEIIIEPPADEPVVEAPVEPVIEKRIEPIIEPEA 910
Query: 147 KSIDTVVVRPDKKELLSKVEKSSRKRI 173
++ V +P K + + +++
Sbjct: 911 PPVEPVTEQPVSKPVEPEEAENTPSSP 937
>gi|170024290|ref|YP_001720795.1| transport protein TonB [Yersinia pseudotuberculosis YPIII]
gi|169750824|gb|ACA68342.1| TonB family protein [Yersinia pseudotuberculosis YPIII]
Length = 256
Score = 36.8 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 30/225 (13%), Positives = 66/225 (29%), Gaps = 21/225 (9%)
Query: 2 RLENGLAISMILHVMFL-LLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP 60
RL L S+ LH + LLY + + P L+V + ++ + +
Sbjct: 11 RLTWSLIFSIGLHGSVVAALLYVSVEQMKIQPEIEDTPLAVTMVNIAEFAAPQPAAAAPE 70
Query: 61 VVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPV 120
VQ + V + + + + + + +K+ +
Sbjct: 71 PVQ-----ETPAVPEETPPVLEETPPEPEELPEPVPVPVPEPVKPKPKPVKKEVKKEVKK 125
Query: 121 SPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIA 180
K + + + A + + V S K+ K PS A A
Sbjct: 126 PEVKKTQAPPDDKPFKSDEAALVANNAPVKSAPVASTPGLSTSAGPKALSKAKPSYPARA 185
Query: 181 IVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVV 225
+ + +VK+ + +++ G V ++
Sbjct: 186 L--------------ALGIEG-QVKVQYDIDESGRVTNVRVLEAT 215
>gi|153948209|ref|YP_001400921.1| transport protein TonB [Yersinia pseudotuberculosis IP 31758]
gi|152959704|gb|ABS47165.1| TonB protein [Yersinia pseudotuberculosis IP 31758]
Length = 256
Score = 36.8 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 31/225 (13%), Positives = 69/225 (30%), Gaps = 21/225 (9%)
Query: 2 RLENGLAISMILHVMFL-LLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP 60
RL L S+ LH + LLY + + P L+V + ++ + +
Sbjct: 11 RLTWSLIFSIGLHGSVVAALLYVSVEQMKIQPEIEDTPLAVTMVNIAEFAAPQPAAAAPE 70
Query: 61 VVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPV 120
VQ + V + + + + + E + ++ +K+ +
Sbjct: 71 PVQ-----ETPAVPEETPPVLEETPPEPEELPEPVPEPVKPKPKPVKKEVKKEVKKEVKK 125
Query: 121 SPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIA 180
K + + + A + + V S K+ K PS A A
Sbjct: 126 PEVKKTQAPPDDKPFKSDEAALVANNAPVKSAPVASTPGLSTSAGPKALSKAKPSYPARA 185
Query: 181 IVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVV 225
+ + +VK+ + +++ G V ++
Sbjct: 186 L--------------ALGIEG-QVKVQYDIDESGRVTNVRVLEAT 215
>gi|260779149|ref|ZP_05888041.1| TolA protein [Vibrio coralliilyticus ATCC BAA-450]
gi|260605313|gb|EEX31608.1| TolA protein [Vibrio coralliilyticus ATCC BAA-450]
Length = 357
Score = 36.8 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 26/230 (11%), Positives = 74/230 (32%), Gaps = 9/230 (3%)
Query: 42 DNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRS 101
+ + E ++K + + + +++ + + ++ + A E E K
Sbjct: 134 ERVKKERERAAKLEAERKAKEEAIKKAEQERLAKEAAIAKAEKERVAREKAAKEAEEKAR 193
Query: 102 SSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKEL 161
+ + ++ + + + +K K + + L+ ++ ++D + + +
Sbjct: 194 RQREAAEKAEKERIAKEKAAKEAAEKARKEKERLERLERERKEQEAALDNIFSGLETEAE 253
Query: 162 LSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKIN 221
+ + + AI + N + F+ +++ +L G
Sbjct: 254 QNSSARQQHVNSEADRYGAIYTQLIQQNLLLEDSFRGK---SCRVNLRLIPTG----AGA 306
Query: 222 VDVVGGTELVRRMLRENARKAVIKSQAFRLSPSTY--KSWRNITLFFVPS 269
+ L R+AV + +F L +NI L P
Sbjct: 307 IVGNLSVLDGDNRLCSATRRAVAQVGSFPLPKEQDVINQLKNINLTVEPK 356
>gi|221329707|ref|NP_001138158.1| rugose, isoform E [Drosophila melanogaster]
gi|220901676|gb|AAF46011.3| rugose, isoform E [Drosophila melanogaster]
Length = 3578
Score = 36.8 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 16/173 (9%), Positives = 45/173 (26%), Gaps = 13/173 (7%)
Query: 29 LLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQ 88
L P + SV+ + + K E +E + +Q
Sbjct: 1443 LKKPEDPKGHSSVE-------------PKTPNLEEPKPQETEQQKSQEVAEELPQKPEEQ 1489
Query: 89 TKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKS 148
+ + A +++ Q ++ + + + +
Sbjct: 1490 VVAIVNQVLDTLVDDTVKAVAAEQTTQTSPAPEEQSPQILAMESPATSVRVKPTEVDSTT 1549
Query: 149 IDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKK 201
T L+ +V++ ++ Q A + + +N + +
Sbjct: 1550 QTTPKNEAGSSLLVEQVQQVLQEDDAQQSAGMTIEDEDYSNQQAAAAVENANS 1602
>gi|163754137|ref|ZP_02161260.1| hypothetical protein KAOT1_20982 [Kordia algicida OT-1]
gi|161326351|gb|EDP97677.1| hypothetical protein KAOT1_20982 [Kordia algicida OT-1]
Length = 304
Score = 36.8 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 32/268 (11%), Positives = 75/268 (27%), Gaps = 30/268 (11%)
Query: 4 ENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQ 63
I+ I+ + L L+ F L P ++ + ++
Sbjct: 16 RASAIITTIIMLSLLFLMIFFGMTYLDPPEESGIAVNFGTTNTGSGNVQPKAALKPKTAP 75
Query: 64 FKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSS--------KGEQALKESAL 115
K E + +E + +T + + S + + + ++A
Sbjct: 76 EKQEEVETQETEAVPEEQPETTPTETASEEVVTQDNTESIAIKKAEEAKRKAEEEAKAAK 135
Query: 116 LRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPS 175
+K++ + +E+ + + ++ S + +
Sbjct: 136 AEADRIAKEKREAEEKLEREKAEKRAKLDAMMNGVNNSDGTEEGGEGSGDGEGDKGDPNG 195
Query: 176 QDAIAIV------------------RNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVL 217
A R+++ N+ + RV + +N+ G V+
Sbjct: 196 DPYEASYYGSPGSGNGGAGGFGLNGRSKISG-GNVDKQECN-EAGRVVVKITVNRAGKVI 253
Query: 218 GKINVDVVGGTELVRRMLRENARKAVIK 245
V V GT L + A +A K
Sbjct: 254 DA--VAGVKGTTNNASCLLQPAERAAYK 279
>gi|71892115|ref|YP_277847.1| hypothetical protein BPEN_347 [Candidatus Blochmannia
pennsylvanicus str. BPEN]
gi|71796221|gb|AAZ40972.1| TolA [Candidatus Blochmannia pennsylvanicus str. BPEN]
Length = 394
Score = 36.8 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 22/223 (9%), Positives = 62/223 (27%), Gaps = 9/223 (4%)
Query: 47 EDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKG 106
+ S KI E G + N + S ++ + + + K
Sbjct: 181 KSQDQSNRFKITEAQPPLAGPTAPNTPKKKSQDQSNRFKITEAQPPLAGPTAPNTPKKKS 240
Query: 107 EQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVE 166
+ ++++ L+ ++ + E + + K + + +
Sbjct: 241 QNTIEKNILIHDKLNYQSHDSNELNNLLNTLINKKKSIENNKKSKLDLTTKKNDNENNIS 300
Query: 167 KSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVG 226
K ++ + + +F + + + +L G +L +
Sbjct: 301 NEMIKSNEINIYKRMISESIQQKF---YNFSYYVGKQCNLRIKLAPDGTLLSVTAI---- 353
Query: 227 GTELVRRMLRENARKAVIKSQAFRLSPSTYKSWRNITLFFVPS 269
+ + A + + Y+ ++N L F P
Sbjct: 354 --SGDYDLCQAAIIAAKLAKIPKPPNSDIYEIFKNTILNFSPQ 394
Score = 36.0 bits (81), Expect = 6.0, Method: Composition-based stats.
Identities = 23/177 (12%), Positives = 54/177 (30%), Gaps = 10/177 (5%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSS---KYKKIE 58
+ + + IS+I+HV+ LLLY I +++ + N++ ++ +
Sbjct: 8 KFRSAVMISIIVHVIVSLLLY-------KHIIKKQQQYTAKIANNKNSINTFIHNSNPKK 60
Query: 59 EPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRM 118
E K S + + G + K + + + + +A
Sbjct: 61 EKNNNIKDQSNRFKITEAQPPLAGPTAPNTPKKKSQDQSNRFKITEAQPPLAGPTAPNTP 120
Query: 119 PVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPS 175
D+ K T + L G + + K ++ + +
Sbjct: 121 KKKSQDQSNRFKITEAQPPLAGPTAPNTPKKKSQDQSNRFKITEAQPPLAGPTAPNT 177
>gi|304396098|ref|ZP_07377980.1| TonB family protein [Pantoea sp. aB]
gi|304356467|gb|EFM20832.1| TonB family protein [Pantoea sp. aB]
Length = 247
Score = 36.8 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 20/237 (8%), Positives = 58/237 (24%), Gaps = 30/237 (12%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPV 61
R + +S+ LH + + + Q+ + +SV + E ++ P
Sbjct: 11 RTPVSMLLSVALHGAVIAGILYMSFQQVSEVPKASQPISVTMVAPEVQPEPAPAIVQPPA 70
Query: 62 VQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVS 121
Q + + + + + + ++ +K +
Sbjct: 71 PQPEPQPEPEPQPVPEPPKAEPVPIPKPEPKPKPKPKPEHKREQPKREVKPRRETKPQAD 130
Query: 122 PYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAI 181
P+ + + + + K + R
Sbjct: 131 PFKQDVPATQNKPAAAPKATPSPTASASTGPKALAVTKPGYPPRALALRIEG-------- 182
Query: 182 VRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLREN 238
RV++ F ++ G V + + + R +++
Sbjct: 183 ---------------------RVRVKFDVDSDGRVDNIQIL-SAQPSNMFERTVKQA 217
>gi|162849478|emb|CAN10445.1| pCP312R [African swine fever virus OURT 88/3]
Length = 312
Score = 36.8 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 13/162 (8%), Positives = 49/162 (30%), Gaps = 1/162 (0%)
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
+ L+ +F +++ T + ++
Sbjct: 59 KGKKAPLMFNFQNEKHVGTIPPSTDEEVIRMNAENPKFLVKKRDRDPCLQFNKYKISPPL 118
Query: 126 QKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNR 185
+ K + + I +++ + +E + + + ++ I +++ +
Sbjct: 119 EDDGLTVKKNEQGEEIYPGDEEKSKLFQIIELLEEAFEDAVQKGPEAMKTKHVIKLIQRK 178
Query: 186 VIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGG 227
+ +N + + K ++ ++N +L I +D
Sbjct: 179 I-SNSAVKNADKHLPNPIARIRIKINPATSILTPILLDKNKP 219
>gi|34499709|ref|NP_903924.1| TonB protein [Chromobacterium violaceum ATCC 12472]
gi|34105560|gb|AAQ61914.1| probable TonB protein [Chromobacterium violaceum ATCC 12472]
Length = 278
Score = 36.8 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 24/219 (10%), Positives = 58/219 (26%), Gaps = 24/219 (10%)
Query: 30 LVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQT 89
+S+ + + +++ E G+S E + + + +T
Sbjct: 45 RPDPPAARQISIRLARQAAPAAPRTERLAEADRAGSGNSAEPEQLLSRREPPRPKPAAET 104
Query: 90 KTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSI 149
T + + ++ L A +
Sbjct: 105 AETPTPATPIARPTPAPAKVQPPPPSGQV---------------STGSLLAQVGALSRGG 149
Query: 150 DTVVVRPDKKELLSKVEKSSRKRIPS-QDAIAIVRNRVIANWNIPSDFKRFKKLR---VK 205
D+ + DK+ + R A R +V N+ + ++ V
Sbjct: 150 DSAMADSDKESGQAGNALGEAARGYPWARYQADWRLKVERIGNLNYPEEARRQGLHGAVT 209
Query: 206 MHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVI 244
+ + G + G+ G +L + A++ V
Sbjct: 210 LEVTIAADGSLQGQRVTRSSGS-----PVLDDAAQRIVE 243
>gi|42524604|ref|NP_969984.1| hypothetical protein Bd3226 [Bdellovibrio bacteriovorus HD100]
gi|39576814|emb|CAE78043.1| conserved hypothetical protein [Bdellovibrio bacteriovorus HD100]
Length = 305
Score = 36.8 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 11/117 (9%), Positives = 33/117 (28%), Gaps = 4/117 (3%)
Query: 14 HVMFLLLLYFNFNVQLLVP----ISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQ 69
H +F + F+ +V P ++ + + + + E +
Sbjct: 5 HFIFTSIFIFSSSVFAQEPTSPEVTSEPVAISEVKEVAPQTTVPAVQAEPIAAPVPVAPT 64
Query: 70 ENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQ 126
+V + Q + + +T + ++ + + P +K
Sbjct: 65 PAQAPAPAVDPKVEAMQKQIEEMQKQLQTLSAPKTESPTPPRPLESSKSPQISGEKA 121
>gi|254428529|ref|ZP_05042236.1| hypothetical protein ADG881_1759 [Alcanivorax sp. DG881]
gi|196194698|gb|EDX89657.1| hypothetical protein ADG881_1759 [Alcanivorax sp. DG881]
Length = 450
Score = 36.8 bits (83), Expect = 3.5, Method: Composition-based stats.
Identities = 15/150 (10%), Positives = 43/150 (28%), Gaps = 2/150 (1%)
Query: 41 VDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKR 100
V + ++ E + + +S + + + ++ E ++
Sbjct: 251 VTVVEARVTQMDPNQRFVERMQLKQKASADRAIAREQRVQEEEQRLLAIARGEREVAERQ 310
Query: 101 SSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKE 160
+ + + A ++ QK+ + E+ I+ + + E
Sbjct: 311 AEAKVDQIQRTTEAETEKQLAITKAQKLKEQAEIEKQTAEINLEKARVEAETRRTLADAE 370
Query: 161 LLSKVEKSSRKRIPSQDAIAIVRNRVIANW 190
K E +Q A + ++ W
Sbjct: 371 AYQKREILRADNALAQKLDAEI--QIQKIW 398
>gi|300691124|ref|YP_003752119.1| TonB protein [Ralstonia solanacearum PSI07]
gi|299078184|emb|CBJ50827.2| TonB protein [Ralstonia solanacearum PSI07]
Length = 210
Score = 36.8 bits (83), Expect = 3.5, Method: Composition-based stats.
Identities = 18/179 (10%), Positives = 39/179 (21%), Gaps = 9/179 (5%)
Query: 72 LVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKA 131
+R E T K+ +++ P + A
Sbjct: 21 PLRQEPPPELQVNIIPDTPPQPVRQPEPPKPEPAKPAPPKQVNIVKPAPQPKPAPTPAPA 80
Query: 132 TNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWN 191
+ A V I ++
Sbjct: 81 LPPSDTAPVVPAAPPTPPAPPVEAAPAPAPAPVQSGPINVG------INDIQCNNPPLVY 134
Query: 192 IPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFR 250
K ++ R + + G V+ V G+ + R ++AR + ++
Sbjct: 135 PTMSQKMGEEGRTLVKITIGPDGDVVNA-AVATSSGSARLDRAALDSARS--LHCSPYK 190
>gi|145485341|ref|XP_001428679.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124395766|emb|CAK61281.1| unnamed protein product [Paramecium tetraurelia]
Length = 601
Score = 36.8 bits (83), Expect = 3.5, Method: Composition-based stats.
Identities = 19/159 (11%), Positives = 46/159 (28%), Gaps = 1/159 (0%)
Query: 37 EMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATEN 96
+ + D K ++ + Q + S Q + + N
Sbjct: 147 PEILKEFTQIIDKVKHPEKYQQQEQSLPRQFQQSLPQQPSSQQSEIIKQKSSIQQQLDTN 206
Query: 97 ETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQ-DLQGISFAEKKSIDTVVVR 155
E + + L+ ++ + KE + S EK+ +
Sbjct: 207 EKENQQREVQQIQLQLEKQRSEQQQKQEELQTQLQKEKEIHQTELRSRIEKEQYLEQENQ 266
Query: 156 PDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPS 194
+K++ + ++ + ++RNR+ WN
Sbjct: 267 ILQKKIEEQTKQEQLLLNKEEQKKNLLRNRIKTAWNYNY 305
>gi|224438003|ref|ZP_03658942.1| TonB-like protein [Helicobacter cinaedi CCUG 18818]
gi|313144449|ref|ZP_07806642.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818]
gi|313129480|gb|EFR47097.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818]
Length = 231
Score = 36.8 bits (83), Expect = 3.5, Method: Composition-based stats.
Identities = 21/142 (14%), Positives = 42/142 (29%), Gaps = 3/142 (2%)
Query: 6 GLAISMILHVMFLLLLYFNF-NVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQF 64
G AIS +LH+ ++ L+ F NV+L +++ + K P Q
Sbjct: 26 GFAISFVLHIGLVVWLFGVFHNVELQQNGDTITTIALATFQAPSNQENVEKPKPTPTRQH 85
Query: 65 KGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYD 124
K Q+ V+ + + + +GE S +
Sbjct: 86 KKQIQKEQVKKQ--GKLAKQEELSPPPTPAPKAKPDEKAEEGEIIQTLSYRNGDEDETFS 143
Query: 125 KQKISKATNKEQDLQGISFAEK 146
+ K + + +
Sbjct: 144 QIKRAIDRKNKYPNMARKRGLE 165
>gi|219122719|ref|XP_002181688.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217406964|gb|EEC46902.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 504
Score = 36.8 bits (83), Expect = 3.6, Method: Composition-based stats.
Identities = 10/136 (7%), Positives = 25/136 (18%), Gaps = 6/136 (4%)
Query: 26 NVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRF 85
+ P+ + ++ IE P V E
Sbjct: 143 SAPTATPVDIPTTVPIEAPTVTPVDVPTAVPIETPTETPVD------VPTTVPIEAPTET 196
Query: 86 SDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAE 145
T + + ++ +P + + + I
Sbjct: 197 PVDLPTTVPIDAPTVTPVDIPTTVPIDAPTQVPVAAPTETPEATPTAVPIDTPTQIPTGV 256
Query: 146 KKSIDTVVVRPDKKEL 161
D + +
Sbjct: 257 VNPTDVCALAQEISAE 272
>gi|195340685|ref|XP_002036943.1| GM12392 [Drosophila sechellia]
gi|194131059|gb|EDW53102.1| GM12392 [Drosophila sechellia]
Length = 1720
Score = 36.8 bits (83), Expect = 3.6, Method: Composition-based stats.
Identities = 16/173 (9%), Positives = 44/173 (25%), Gaps = 13/173 (7%)
Query: 29 LLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQ 88
L P + SV+ + + K E +E + +Q
Sbjct: 1085 LKKPEDPKADSSVE-------------PKTPKLEEPKPQETEQQKSQEVAEELPQKPEEQ 1131
Query: 89 TKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKS 148
+ + A +++ Q ++ + + + +
Sbjct: 1132 VVAIVNQVLDTLVDDTVKAVAAEQTTQTSPAPEEQSPQILAMESPAASVRVKPTEVDSTT 1191
Query: 149 IDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKK 201
T L+ +V++ + Q A + + +N + +
Sbjct: 1192 QTTPKNEAGSSLLVEQVQQVLLEDDAQQSAGMTIEDEEYSNQQAAAAVENANS 1244
>gi|167570851|ref|ZP_02363725.1| TonB domain protein [Burkholderia oklahomensis C6786]
Length = 151
Score = 36.8 bits (83), Expect = 3.6, Method: Composition-based stats.
Identities = 7/53 (13%), Positives = 17/53 (32%), Gaps = 5/53 (9%)
Query: 204 VKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPSTY 256
V + F +++ G ++ G E L + ++ P+
Sbjct: 69 VVVAFTVDRNGQLVKSAVYRSNGDDEAEGIALAS-----LRRAAPLPSPPTKM 116
>gi|146344017|ref|YP_001201873.1| putative transmembrane protein [Pseudomonas fluorescens SBW25]
gi|146187829|emb|CAM96158.1| putative transmembrane protein [Pseudomonas fluorescens SBW25]
Length = 246
Score = 36.8 bits (83), Expect = 3.6, Method: Composition-based stats.
Identities = 15/149 (10%), Positives = 50/149 (33%), Gaps = 7/149 (4%)
Query: 94 TENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVV 153
+ SS + + + + + S + ++ + Q + A + V
Sbjct: 72 EAKSVQASSDAAEVKISQAAIQQKQLASEKSIASLQQSIEQSQSYRTAKAALDAEQEAAV 131
Query: 154 VRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQK 213
+ + + ++ + ++ ++ ++ R+ + W P + V++ Q
Sbjct: 132 AKIEAAKADAQKQVEEAEKKGVENFDKMLVARLQSRWMRPESATAP--VSVEVLVQFAPD 189
Query: 214 GFVLGKINVDVVGGTELVRRMLRENARKA 242
G + + G + + ++ KA
Sbjct: 190 GTITNALVPTSSGSKD-----VDDSVIKA 213
>gi|238920739|ref|YP_002934254.1| protein TolA, [Edwardsiella ictaluri 93-146]
gi|238870308|gb|ACR70019.1| protein TolA, putative [Edwardsiella ictaluri 93-146]
Length = 389
Score = 36.8 bits (83), Expect = 3.6, Method: Composition-based stats.
Identities = 16/111 (14%), Positives = 41/111 (36%), Gaps = 1/111 (0%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPV 61
+L + IS+ILH++ + LL + ++ P+S + +++
Sbjct: 10 KLNRSVIISVILHIVLIGLLIWG-SLMQDNPMSEGGDGGGGGSAIDAVMVDPNAVVQQYN 68
Query: 62 VQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKE 112
Q + + Q+ + + + A E + + + QA ++
Sbjct: 69 RQQEQQNAAQRAEQQRQQKAEKQAQEMQRKRAEEQQRLKVLEKERLQAQED 119
>gi|108562782|ref|YP_627098.1| cell division protein [Helicobacter pylori HPAG1]
gi|107836555|gb|ABF84424.1| cell division protein [Helicobacter pylori HPAG1]
Length = 870
Score = 36.8 bits (83), Expect = 3.6, Method: Composition-based stats.
Identities = 18/168 (10%), Positives = 50/168 (29%), Gaps = 9/168 (5%)
Query: 24 NFNVQLLVPISRREML-------SVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDF 76
P + + ++ S I N++ + + + + + +
Sbjct: 292 TLTPATPKPATLKPIISAPIMPASAPIIENDNKTQNHKAPNPPKKEESPQENVQEEMIEE 351
Query: 77 SVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPY--DKQKISKATNK 134
++QEN + + + + +S+ K + S + + +K
Sbjct: 352 TIQENLKEEEKEIQNAPSFSPLTPTSAKKPVMVKELSENKEILDGLDYGEVEKPKDYELP 411
Query: 135 EQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIV 182
L + S+D + ++LLSK+ + +
Sbjct: 412 TTQLLNAVCLKDTSLDENEIDQKIQDLLSKLRTFKIDGDIIRTYSGPI 459
>gi|298712798|emb|CBJ48763.1| Centrin-1, putative [Ectocarpus siliculosus]
Length = 2926
Score = 36.8 bits (83), Expect = 3.6, Method: Composition-based stats.
Identities = 13/117 (11%), Positives = 34/117 (29%), Gaps = 2/117 (1%)
Query: 93 ATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTV 152
E + + + ++ ++ V D + AT +++ + K V
Sbjct: 1866 PHEQAKQEDPNPQKQEQHQQRGEEEKKVIDEDAVAVEAATARKEPALAVKVTGGKERGRV 1925
Query: 153 VVRPDKKELLSKVEKSSRKRI--PSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMH 207
+ E+ + A + R+ W + K+ R ++
Sbjct: 1926 LATRATGRRRRFEEEERDAERELVVKRAEDVAERRIKRQWRTQAGAAELKRERDRIR 1982
>gi|290510463|ref|ZP_06549833.1| cell envelope integrity inner membrane protein TolA [Klebsiella sp.
1_1_55]
gi|289777179|gb|EFD85177.1| cell envelope integrity inner membrane protein TolA [Klebsiella sp.
1_1_55]
Length = 125
Score = 36.8 bits (83), Expect = 3.7, Method: Composition-based stats.
Identities = 18/131 (13%), Positives = 38/131 (29%), Gaps = 13/131 (9%)
Query: 141 ISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFK 200
S + S K+S + +++ + + + D +
Sbjct: 6 SSGKNAPKTGGGAKGNNASAAGSGNTKNSASGADINNYAGQIKSAIESKF---YDASSYA 62
Query: 201 KLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPST--YKS 258
+ +L G +L + GG + + + F PS Y+
Sbjct: 63 GKTCTLRIKLAPDGLLLN---IQSEGGDPALCQAALAA-----ARQAKFPKPPSQAVYEV 114
Query: 259 WRNITLFFVPS 269
++N L F P
Sbjct: 115 FKNAPLDFKPQ 125
>gi|254583412|ref|XP_002497274.1| ZYRO0F01782p [Zygosaccharomyces rouxii]
gi|238940167|emb|CAR28341.1| ZYRO0F01782p [Zygosaccharomyces rouxii]
Length = 514
Score = 36.8 bits (83), Expect = 3.7, Method: Composition-based stats.
Identities = 19/206 (9%), Positives = 53/206 (25%), Gaps = 19/206 (9%)
Query: 42 DNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSD-------------- 87
D I E+ +E GS++ +
Sbjct: 211 DFISLEERFKILQLLKQEKEELENGSARPPEPTEKQRAGKNKAGKSYKISTGIGTNLFTE 270
Query: 88 -----QTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGIS 142
E E +R + ++ ++ V + + + L +
Sbjct: 271 QDKLFDLLERQKEREKRREKVLRTKEDEQKQEEQNKIVQEREASLDPELAQAQDRLDKLL 330
Query: 143 FAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKL 202
+ + S + + + + + + + + + R + W + + ++
Sbjct: 331 YFQDTSAERTKIIDNVSDFSMANDSNQWGSARERALMLKKQQRNLRKWQKLENERNGRRD 390
Query: 203 RVKMHFQLNQKGFVLGKINVDVVGGT 228
+ + + G V K GG
Sbjct: 391 KYVVSMDIGPNGKVTMKEVHKDRGGA 416
>gi|225557436|gb|EEH05722.1| G1/S regulator [Ajellomyces capsulatus G186AR]
Length = 676
Score = 36.8 bits (83), Expect = 3.7, Method: Composition-based stats.
Identities = 11/149 (7%), Positives = 34/149 (22%)
Query: 56 KIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESAL 115
+ K S + + E T T + S +
Sbjct: 376 PFIDEPPAKKESEKRKGAASQTRDEKPAAKEKSTTTTEMKMMQPPERSVEKRALQDVQGG 435
Query: 116 LRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPS 175
+ ++ + K L + + + + +
Sbjct: 436 VSQTITRQEPTPAPKRIETLLMLPAKPASPRSKGFEAFPGAKAALATYLAREPAASGVQP 495
Query: 176 QDAIAIVRNRVIANWNIPSDFKRFKKLRV 204
+ + +R++++++ K V
Sbjct: 496 SNITSAIRSQIVSSTAAAPGAKAGTSKEV 524
>gi|218660862|ref|ZP_03516792.1| hypothetical protein RetlI_15467 [Rhizobium etli IE4771]
Length = 346
Score = 36.8 bits (83), Expect = 3.7, Method: Composition-based stats.
Identities = 25/159 (15%), Positives = 51/159 (32%), Gaps = 1/159 (0%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
+ G+ S++LHV + LL F P E + V+ + + + KK EE
Sbjct: 21 IRWGVGASVLLHVPIVALLIFGLPKIEPKPA-EDESVKVELVPPPEEKKPEEKKPEEKPP 79
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
+ K Q N + + + + + G+ + + L
Sbjct: 80 EPKPPEQANKQPPPPPPPSPAKKASEQAKPRPMPTLNPVTEFGGKNSGPDKFLAGNSSEG 139
Query: 123 YDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKEL 161
K + + + AE+ + RP ++
Sbjct: 140 ERKPARTSPQRTSGRVLPKAVAEEPKTEAPPSRPVPDDV 178
>gi|254418170|ref|ZP_05031894.1| TonB family C-terminal domain protein [Brevundimonas sp. BAL3]
gi|196184347|gb|EDX79323.1| TonB family C-terminal domain protein [Brevundimonas sp. BAL3]
Length = 217
Score = 36.8 bits (83), Expect = 3.7, Method: Composition-based stats.
Identities = 11/88 (12%), Positives = 24/88 (27%), Gaps = 1/88 (1%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
+ + +S++ HV ++ +N QL P + + K+E
Sbjct: 1 MWAAIGLSVLAHVG-AGVVLYNQRFQLKAPDVAPPAPPPTIVTLDLPRPKPLPKVEAKAP 59
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTK 90
+ F E +
Sbjct: 60 PAPQNPTHKPPVVFPTTEPSPFAAPDVP 87
>gi|254294884|ref|YP_003060907.1| TonB family protein [Hirschia baltica ATCC 49814]
gi|254043415|gb|ACT60210.1| TonB family protein [Hirschia baltica ATCC 49814]
Length = 252
Score = 36.8 bits (83), Expect = 3.7, Method: Composition-based stats.
Identities = 20/152 (13%), Positives = 48/152 (31%), Gaps = 9/152 (5%)
Query: 108 QALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEK 167
+ +A + P P ++ A + + + SK K
Sbjct: 89 KVPTTTAPILPPAEPIVASTLTAAPEPTVTQAISASTKTTAQPVKTGGNTTANKASKPPK 148
Query: 168 ---SSRKRIPSQDAIAIVRNRVIANWNIPSDFK-RFKKLRVKMHFQLNQKGFVLGKINVD 223
+ + +++ + + P + R ++ VK+ F+++Q+G +L K
Sbjct: 149 FGVPNGVKKEQASYAGLLQAWFLKHKRYPHQARARHQEGVVKVWFKIDQQGNILEKRIEK 208
Query: 224 VVGGTELVRRMLRENARKAVIKSQAFRLSPST 255
G +L + + K+ P
Sbjct: 209 SCG-----FSILDKATLSLLQKASPVPAPPQK 235
>gi|86608617|ref|YP_477379.1| TonB family protein [Synechococcus sp. JA-2-3B'a(2-13)]
gi|86557159|gb|ABD02116.1| TonB family protein [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 379
Score = 36.4 bits (82), Expect = 3.8, Method: Composition-based stats.
Identities = 20/182 (10%), Positives = 43/182 (23%), Gaps = 30/182 (16%)
Query: 98 TKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPD 157
S Q + Q+ S ++ + + + I
Sbjct: 200 QPSERVSDPSQLAPVPPAPQPVTEVLPAQRPSDSSQLGPPVSASAPSNGAGIQGSGASGL 259
Query: 158 KKELLSKVEKSSRKRIPS---QDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKG 214
S S +A ++ +V NW + V +
Sbjct: 260 ANPTQSAPNPPSVAARADVDWGPWLAALQRKVEQNW--IPGQTGTSRRTVVI-------- 309
Query: 215 FVLGKINVDVVGGTE---------LVRRMLRENARKAVIKSQAFRLSPSTYKSWRNITLF 265
V + + + A A+ ++ F P Y+ ++T+
Sbjct: 310 -------FTVGRAGDLQSIRLGRTSGSQQTDDAALTAIQRAAPFLPLPEAYEG-NSVTIN 361
Query: 266 FV 267
F
Sbjct: 362 FT 363
>gi|195499228|ref|XP_002096860.1| GE24823 [Drosophila yakuba]
gi|194182961|gb|EDW96572.1| GE24823 [Drosophila yakuba]
Length = 477
Score = 36.4 bits (82), Expect = 3.8, Method: Composition-based stats.
Identities = 10/76 (13%), Positives = 25/76 (32%)
Query: 17 FLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDF 76
+ + Y + PI E L ++ E + + + P + + + E+ D
Sbjct: 248 VISICYLSVPEIEPEPIFIPEPLPIEESVAELEPPAPQEHLVIPAPEPEPPTSESEESDE 307
Query: 77 SVQENGDRFSDQTKTH 92
+ + Q +
Sbjct: 308 LLSSEEEVLEPQPEEE 323
>gi|146311933|ref|YP_001177007.1| transport protein TonB [Enterobacter sp. 638]
gi|145318809|gb|ABP60956.1| outer membrane transport energization protein TonB [Enterobacter
sp. 638]
Length = 264
Score = 36.4 bits (82), Expect = 3.8, Method: Composition-based stats.
Identities = 25/220 (11%), Positives = 59/220 (26%), Gaps = 18/220 (8%)
Query: 8 AISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGS 67
+S+++H + L + Q++ + + +SV + + EPVV+ +
Sbjct: 41 LLSVVIHGAVVAGLLYTSVHQVIEMPAPAQPISVTMVTPAELEPQVVSPPPEPVVEPEPE 100
Query: 68 ----------------SQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALK 111
E + + + E T ++ +
Sbjct: 101 PEPIPEPPKEAPVVIHKPEPKPKPKPKPVKKVEERPKREERPVEPRTTQTVQNTAPAKPV 160
Query: 112 ESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRK 171
+ +A ++ Q + + V+ D
Sbjct: 161 MNNSPATAKPVVSAPSGPRALSRNQPQYPARAQALRIEGRLRVKFDVTADGRVDNVEILS 220
Query: 172 RIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLN 211
P+ V+ + W + L V + F+LN
Sbjct: 221 AQPANMFEREVKAA-MRKWRYEAGKPG-NGLIVNIVFRLN 258
>gi|326932463|ref|XP_003212337.1| PREDICTED: probable cation-transporting ATPase 13A2-like [Meleagris
gallopavo]
Length = 1308
Score = 36.4 bits (82), Expect = 3.8, Method: Composition-based stats.
Identities = 23/210 (10%), Positives = 52/210 (24%), Gaps = 12/210 (5%)
Query: 29 LLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQ 88
P VD + + S++ VQ + E + + D + Q
Sbjct: 104 TKPPTPGASFSQVDIGVDPEPESAQLIPPPPKQVQKSDEAAEPKEENPLPPASADAGASQ 163
Query: 89 TKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKS 148
A E S + + + S K + A + +E+
Sbjct: 164 KAEAAAEVLPPVSDNDMEVEPPVVVKDKKSYKSKRSKTPVQSAAASVTEKPVTRKSERID 223
Query: 149 IDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIAN-WNIPSDFKRFKKLRVKMH 207
+ + + + K+ + + +V N PS + + +
Sbjct: 224 REKLKRSSSPRGEVQKLSELKVEA-----------EKVSRNAAKSPSSAAEPENVEPSLP 272
Query: 208 FQLNQKGFVLGKINVDVVGGTELVRRMLRE 237
++ V + E
Sbjct: 273 ISRTRRRNVRSVYATTGDNEGPSPVKDFVE 302
>gi|184158032|ref|YP_001846371.1| hypothetical protein ACICU_01712 [Acinetobacter baumannii ACICU]
gi|332874492|ref|ZP_08442395.1| hypothetical protein HMPREF0022_02014 [Acinetobacter baumannii
6014059]
gi|183209626|gb|ACC57024.1| hypothetical protein ACICU_01712 [Acinetobacter baumannii ACICU]
gi|322508351|gb|ADX03805.1| Putative uncharacterized protein [Acinetobacter baumannii 1656-2]
gi|323517974|gb|ADX92355.1| hypothetical protein ABTW07_1926 [Acinetobacter baumannii
TCDC-AB0715]
gi|332737336|gb|EGJ68260.1| hypothetical protein HMPREF0022_02014 [Acinetobacter baumannii
6014059]
Length = 124
Score = 36.4 bits (82), Expect = 3.8, Method: Composition-based stats.
Identities = 16/111 (14%), Positives = 36/111 (32%), Gaps = 11/111 (9%)
Query: 161 LLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKI 220
L + + ++ + ++ WN+P + + L+ G + I
Sbjct: 23 LSPAKSDDEKIIVEAEKYKQQYQKKIFKIWNVPPSSVG---MSASVKVFLSDTGEIEQII 79
Query: 221 NVDVVGGTELVRRMLRENARKAVIKSQAFRLS--PSTYKSWRNITLFFVPS 269
+D + + + KA+ ++ F L P K R + F
Sbjct: 80 FLDKE------DQKFKSSIEKAIWRASPFVLPFNPEVRKQVRKFNIKFTAK 124
>gi|51597166|ref|YP_071357.1| pertactin family virulence factor/autotransporter [Yersinia
pseudotuberculosis IP 32953]
gi|51590448|emb|CAH22088.1| putative pertactin family virulence factor/autotransporter
[Yersinia pseudotuberculosis IP 32953]
Length = 1171
Score = 36.4 bits (82), Expect = 3.9, Method: Composition-based stats.
Identities = 18/193 (9%), Positives = 58/193 (30%), Gaps = 12/193 (6%)
Query: 4 ENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIY----NEDYHSSKYKKIEE 59
L +S+++ + + P + + V + + K
Sbjct: 9 TRLLPLSILI-SALIPAAVLAAPSVAIPPPVQDLINQVQSYANAHVISPEQAETLIKRLT 67
Query: 60 PVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMP 119
+ + + ++ + E + ++ + + + + + +Q K A +
Sbjct: 68 VTPEKLKEEEARVKQELAAVEKKQKEANTEIITTSIEKDQFNKALNNKQKAKLVAEAVLI 127
Query: 120 VSPYDKQKISKATNKEQDLQGISFAEK-------KSIDTVVVRPDKKELLSKVEKSSRKR 172
+ + + KA N+ L + + K +S + K L + + +
Sbjct: 128 NTNNRQNEAIKAVNENWSLSTDNLSTKLITMVNRESEIQTALDERTKRLETANAQQQEQE 187
Query: 173 IPSQDAIAIVRNR 185
Q ++ +
Sbjct: 188 KKLQQLGDDIQEK 200
>gi|9628203|ref|NP_042789.1| pCP312R [African swine fever virus]
gi|82051566|sp|Q65180|VF312_ASFB7 RecName: Full=Uncharacterized protein CP312R; Short=pCP312R
gi|780465|gb|AAA65325.1| pCP312R [African swine fever virus]
gi|291289539|emb|CBH29196.1| BA71V-CP312R [African swine fever virus E75]
gi|1097487|prf||2113434DB CP312R gene
Length = 312
Score = 36.4 bits (82), Expect = 3.9, Method: Composition-based stats.
Identities = 13/162 (8%), Positives = 49/162 (30%), Gaps = 1/162 (0%)
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
+ L+ +F +++ T + ++
Sbjct: 59 KGKKAPLMFNFQNEKHVGTIPPSTDEEVIRMNAENPKFLVKKRDRDPCLQFNKYKISPPL 118
Query: 126 QKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNR 185
+ K + + I +++ + +E + + + ++ I +++ +
Sbjct: 119 EDDGLTVKKNEQGEEIYPGDEEKSKLFQIIELLEEAFEDAVQKGPEAMKTKHVIKLIQRK 178
Query: 186 VIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGG 227
+ +N + + K ++ ++N +L I +D
Sbjct: 179 I-SNSAVKNADKPLPNPIARIRIKINPATSILTPILLDKNKP 219
>gi|255319442|ref|ZP_05360657.1| hypothetical protein ACIRA0001_0261 [Acinetobacter radioresistens
SK82]
gi|255303510|gb|EET82712.1| hypothetical protein ACIRA0001_0261 [Acinetobacter radioresistens
SK82]
Length = 188
Score = 36.4 bits (82), Expect = 4.0, Method: Composition-based stats.
Identities = 13/73 (17%), Positives = 25/73 (34%), Gaps = 10/73 (13%)
Query: 182 VRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARK 241
N++ W+IPS K L+ G VL + ++ + E A +
Sbjct: 109 FENKIKRAWDIPSGSSGNK---ATARVTLSDSGAVLSVVV----NSSDPDMKASVEAAVR 161
Query: 242 AVIKSQAFRLSPS 254
A + + +
Sbjct: 162 A---AAPYPMPSD 171
>gi|171681379|ref|XP_001905633.1| hypothetical protein [Podospora anserina S mat+]
gi|170940648|emb|CAP65876.1| unnamed protein product [Podospora anserina S mat+]
Length = 462
Score = 36.4 bits (82), Expect = 4.0, Method: Composition-based stats.
Identities = 18/161 (11%), Positives = 39/161 (24%), Gaps = 9/161 (5%)
Query: 71 NLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISK 130
+ + + E+ K L K +S+
Sbjct: 4 QSPPMQPPAQRPSPLPFDDQPGLEVVPHDYLPEVRPEEEPK--FYLVPAQHQAQKAHLSE 61
Query: 131 ATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANW 190
+ D G + P K + +S + S+ +
Sbjct: 62 DFPQAVDSNGELDVGSPTSTEKGTLPVSKSYQRAGDDNSNAVLNSRPET------IRQGS 115
Query: 191 NIPSDFKRFKKLRV-KMHFQLNQKGFVLGKINVDVVGGTEL 230
+ + R V + F L+ +G V ++ G +
Sbjct: 116 KLSAVGWRKANGDVERFLFYLDPQGRVRRSRSITGPGSSTS 156
>gi|119485071|ref|ZP_01619456.1| translation initiation factor IF-2 [Lyngbya sp. PCC 8106]
gi|119457299|gb|EAW38424.1| translation initiation factor IF-2 [Lyngbya sp. PCC 8106]
Length = 1050
Score = 36.4 bits (82), Expect = 4.0, Method: Composition-based stats.
Identities = 11/166 (6%), Positives = 31/166 (18%), Gaps = 7/166 (4%)
Query: 30 LVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQT 89
PI + +SV D + +V + V+ S++
Sbjct: 169 NPPIQQPTEISVSEPSEPDSAELDSPEEAPQLVSPPVRPSAQSSQPAVVKNKPVLKSNKP 228
Query: 90 K-------THATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGIS 142
T + + + K + +++ +
Sbjct: 229 ASKSAEVQQQPAAKTTTTDKPAPKPTKNPRPGSSESRSADSKETKEREVRKPRKEITSLK 288
Query: 143 FAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIA 188
+ + + V +
Sbjct: 289 PKATVPELQPPPARRGNDPVPDTTDGEEGEEELIPSTDDVDLEIKR 334
>gi|221058743|ref|XP_002260017.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
knowlesi strain H]
gi|193810090|emb|CAQ41284.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
knowlesi strain H]
Length = 1080
Score = 36.4 bits (82), Expect = 4.1, Method: Composition-based stats.
Identities = 18/140 (12%), Positives = 37/140 (26%)
Query: 32 PISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKT 91
P+ + VD + + K +EE K S+ ++ + +
Sbjct: 850 PVDGVKSAPVDGVKSAPVDGVKSAPVEEAKSDVKDSNITTKTIKPFLKIKVEPKKENLNK 909
Query: 92 HATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDT 151
+ K +SK + P A + S K
Sbjct: 910 LVKKLPPKILPASKEPEEKGSDGAKDPPSEKLPPTNPPTAKTDVTPTKEESGLPKMEKRL 969
Query: 152 VVVRPDKKELLSKVEKSSRK 171
K ++LS ++ +
Sbjct: 970 EKKISIKNKMLSLLKMKTGG 989
>gi|162849305|emb|CAN10195.1| pCP312R [African swine fever virus Benin 97/1]
Length = 307
Score = 36.4 bits (82), Expect = 4.1, Method: Composition-based stats.
Identities = 13/162 (8%), Positives = 49/162 (30%), Gaps = 1/162 (0%)
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
+ L+ +F +++ T + ++
Sbjct: 54 KGKKAPLMFNFQNEKHVGTIPPSTDEEVIRMNAENPKFLVKKRDRDPCLQFNKYKISPPL 113
Query: 126 QKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNR 185
+ K + + I +++ + +E + + + ++ I +++ +
Sbjct: 114 EDDGLTVKKNEQGEEIYPGDEEKSKLFQIIELLEEAFEDAVQKGPEAMKTKHVIKLIQRK 173
Query: 186 VIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGG 227
+ +N + + K ++ ++N +L I +D
Sbjct: 174 I-SNSAVKNADKPLPNPIARIRIKINPATSILTPILLDKNKP 214
>gi|160873272|ref|YP_001552588.1| peptidase M14 carboxypeptidase A [Shewanella baltica OS195]
gi|160858794|gb|ABX47328.1| peptidase M14 carboxypeptidase A [Shewanella baltica OS195]
gi|315265499|gb|ADT92352.1| peptidase M14 carboxypeptidase A [Shewanella baltica OS678]
Length = 683
Score = 36.4 bits (82), Expect = 4.1, Method: Composition-based stats.
Identities = 15/99 (15%), Positives = 33/99 (33%)
Query: 22 YFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQEN 81
F+ +V + +S + SVD + NE +K + + + V D + E
Sbjct: 3 LFSLSVIAIACLSAGSLYSVDAVANEAKTLAKTAQASTDLPTSTPVAAAQTVTDKTPAET 62
Query: 82 GDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPV 120
+ A T+ +++ + +P
Sbjct: 63 PATAPEDVNPAANTQATEPAATVATDATTVAPEPAPIPE 101
>gi|303398781|emb|CBW46762.1| CP312R [African swine fever virus Georgia 2007/1]
Length = 307
Score = 36.4 bits (82), Expect = 4.1, Method: Composition-based stats.
Identities = 13/162 (8%), Positives = 49/162 (30%), Gaps = 1/162 (0%)
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
+ L+ +F +++ T + ++
Sbjct: 54 KGKKAPLMFNFQNEKHVGTIPPSTDEEVIRMNAENPKFLVKKRDRDPCLQFNKYKISPPL 113
Query: 126 QKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNR 185
+ K + + I +++ + +E + + + ++ I +++ +
Sbjct: 114 EDDGLTVKKNEQGEEIYPGDEEKSKLFQIIELLEEAFEDAVQKGPEAMKTKHVIKLIQRK 173
Query: 186 VIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGG 227
+ +N + + K ++ ++N +L I +D
Sbjct: 174 I-SNSAVKNADKPLPNPIARIRIKINPATSILTPILLDKNKP 214
>gi|1174734|sp|P45610|TONB_KLEPN RecName: Full=Protein tonB
gi|405758|emb|CAA48498.1| TonB [Klebsiella pneumoniae]
Length = 243
Score = 36.4 bits (82), Expect = 4.1, Method: Composition-based stats.
Identities = 17/137 (12%), Positives = 46/137 (33%)
Query: 8 AISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGS 67
+S+ +H + L + Q++ S + + + + D + + EPVV+ +
Sbjct: 14 LLSVAIHGAVVAGLLYTSVHQVIEQPSPTQPIEITMVAPADLEPPPAQPVVEPVVEPEPE 73
Query: 68 SQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQK 127
+ +V + + + + + K + + + A P SP++
Sbjct: 74 PEPEVVPEPPKEAVVIHKPEPKPKPKPKPKPKPEKKVEQPKREVKPAAEPRPASPFENNN 133
Query: 128 ISKATNKEQDLQGISFA 144
+ A +
Sbjct: 134 TAPARTAPSTSTAAAKP 150
>gi|297539623|ref|YP_003675392.1| TonB family protein [Methylotenera sp. 301]
gi|297258970|gb|ADI30815.1| TonB family protein [Methylotenera sp. 301]
Length = 260
Score = 36.4 bits (82), Expect = 4.1, Method: Composition-based stats.
Identities = 20/241 (8%), Positives = 56/241 (23%), Gaps = 38/241 (15%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
+ S++LH++ ++ + + +L V+ + + + +
Sbjct: 28 AVICSILLHILLAFII----PNVKFEAVKKPVLLIVELSKKPEPPPVVVPEPVKVEPEPI 83
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
E + K T + + + + + + SP
Sbjct: 84 KPKTEPKP-ELKPITKPLPTPSVVKNEPTPAVPPPAVVTHQTEVIAAAPKVDAAPSPMPP 142
Query: 126 QKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNR 185
++ + E +
Sbjct: 143 VPVATPEPPKPAAPSQEDMEDAR---------------------------GRYGNTLWGA 175
Query: 186 VIANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVI 244
+ + P + + + L+ G + K + G L + A + V
Sbjct: 176 IGKHKQYPRIAQMRGWQGEAVVELLLDGNGKLKSKKIIQSSG-----FESLDKQALEMVE 230
Query: 245 K 245
K
Sbjct: 231 K 231
>gi|123233192|emb|CAM16580.1| novel protein similar to vertebrate symplekin (SYMPK) [Danio rerio]
Length = 1223
Score = 36.4 bits (82), Expect = 4.2, Method: Composition-based stats.
Identities = 15/161 (9%), Positives = 42/161 (26%)
Query: 13 LHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENL 72
H+ ++ + P + E+ + + + K+ + PV Q + + + +
Sbjct: 1062 AHIPTSIMTVLEATNRKPEPEPQPEIQHPEVMEEREVPLPKHISVHAPVQQAEPPAPKPI 1121
Query: 73 VRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKAT 132
V + E + E A D + + +
Sbjct: 1122 VFTEPMPPQEKHHHHHQVPSRREVAEVAEPMEQEETAHVPEEDTSEAPPQMDVSEEAPQS 1181
Query: 133 NKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRI 173
+ + S E + +E + ++
Sbjct: 1182 SPVAEKADESMDESTAGPADEAEEPVEEPEEEHAETGESSA 1222
>gi|77812697|ref|NP_035782.3| titin isoform N2-A [Mus musculus]
Length = 33467
Score = 36.4 bits (82), Expect = 4.2, Method: Composition-based stats.
Identities = 17/160 (10%), Positives = 35/160 (21%), Gaps = 3/160 (1%)
Query: 27 VQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFS 86
V + + +SV + +K + + K + +
Sbjct: 10548 VPAPKEVVPEKKVSVVPPKKPEAPPAKVPEAPKEAAPEKKVPVAPKKKPEAPPVKVPEVP 10607
Query: 87 DQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEK 146
E K E E V P K + E + A K
Sbjct: 10608 KTAVPQKKIPEAI---PPKPESPPLEVPEAPKEVVPEKKVSVVPPKKPEAPPAKVPEAPK 10664
Query: 147 KSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRV 186
++ V K+ + + + +
Sbjct: 10665 EAAPEKKVPVAPKKKPEAPPVKVPEVPKAAVPQKKIPEAI 10704
>gi|260777294|ref|ZP_05886188.1| ferric siderophore transport system binding protein TonB [Vibrio
coralliilyticus ATCC BAA-450]
gi|260606960|gb|EEX33234.1| ferric siderophore transport system binding protein TonB [Vibrio
coralliilyticus ATCC BAA-450]
Length = 252
Score = 36.4 bits (82), Expect = 4.2, Method: Composition-based stats.
Identities = 22/189 (11%), Positives = 56/189 (29%), Gaps = 8/189 (4%)
Query: 57 IEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALL 116
P Q + + E + + ++A K+ +
Sbjct: 46 KAVPTQQPPAEPEPVAEQPVEAPEPPKPVEPAKVDPPVKKPVVKEKPVVKKEAPKQQKKV 105
Query: 117 RMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQ 176
+ +K ++ ++Q + + + + VV + + S + ++
Sbjct: 106 VEKKTDKPVKKTTQKKPQDQPVVKKTVEKAEKKKEVVEQTKPQPAEVNQGVSQEPVLVNR 165
Query: 177 DAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLR 236
++ KR + L++ G + +I + G T +L
Sbjct: 166 P---SFLSKPTRPVYPRLAQKRKLEGVAMYEVWLDENGDQVRQILISSSGAT-----ILD 217
Query: 237 ENARKAVIK 245
+A KA+ K
Sbjct: 218 NSALKAIKK 226
>gi|195345863|ref|XP_002039488.1| GM23000 [Drosophila sechellia]
gi|194134714|gb|EDW56230.1| GM23000 [Drosophila sechellia]
Length = 899
Score = 36.4 bits (82), Expect = 4.2, Method: Composition-based stats.
Identities = 12/173 (6%), Positives = 43/173 (24%), Gaps = 17/173 (9%)
Query: 29 LLVPISRREMLSV------------DNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVR-- 74
P++ + +V + +Y K++++P E +
Sbjct: 675 TPPPVTVPQAAAVPRKARIGKSMAREMVYAAQQQLLPEKQLKQPKEAAAKQEAEPEMPFV 734
Query: 75 ---DFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKA 131
+ + D + + ++ L P + +
Sbjct: 735 LKAEIKAETKIKIEHDGEAQASIHISELPDLKPTIKTEPEQELELEAASVPSVAKMEPQP 794
Query: 132 TNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRN 184
E + + + ++ L ++K + ++++
Sbjct: 795 EKVEVEREQQEPPFDAEQQPMPGGSKQRFNLLASSSGNKKTKTNNSYKSLIKQ 847
>gi|217971358|ref|YP_002356109.1| peptidase M14 carboxypeptidase A [Shewanella baltica OS223]
gi|217496493|gb|ACK44686.1| peptidase M14 carboxypeptidase A [Shewanella baltica OS223]
Length = 683
Score = 36.4 bits (82), Expect = 4.2, Method: Composition-based stats.
Identities = 17/161 (10%), Positives = 43/161 (26%), Gaps = 5/161 (3%)
Query: 22 YFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQEN 81
F+ +V + +S + SVD + NE +K + + + V D + E
Sbjct: 3 LFSLSVIAIACLSAGSLYSVDAVANEAKTLAKTAQASTDLPTSTPVAAAQTVTDKTPAET 62
Query: 82 GDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGI 141
A ++ ++ + +P ++ + +
Sbjct: 63 PATAPQDVSPAA-----NTQATEPAATVATDATTVAPEPAPIPERANTVVNDAILPPSIT 117
Query: 142 SFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIV 182
+S+ V S + + +
Sbjct: 118 WHGASESLMLSVDNEWATPFEQSSGIESPSYEATIAWLDKL 158
>gi|167563701|ref|ZP_02356617.1| TonB domain protein [Burkholderia oklahomensis EO147]
Length = 146
Score = 36.4 bits (82), Expect = 4.3, Method: Composition-based stats.
Identities = 7/53 (13%), Positives = 17/53 (32%), Gaps = 5/53 (9%)
Query: 204 VKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPSTY 256
V + F +++ G ++ G E L + ++ P+
Sbjct: 64 VVVAFTVDRNGQLVKSAVYRSNGDDEAEGIALAS-----LRRAAPLPSPPTKM 111
>gi|327189668|gb|EGE56816.1| hypothetical protein RHECNPAF_560006 [Rhizobium etli CNPAF512]
Length = 363
Score = 36.4 bits (82), Expect = 4.3, Method: Composition-based stats.
Identities = 24/193 (12%), Positives = 47/193 (24%), Gaps = 17/193 (8%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
+ G+ S++LHV + L F P E + V+ + + + KK E+P
Sbjct: 35 IRWGVGASVLLHVPLIAPLIFGLPKIEPKP-PEDESVKVELVPPPEEKKPEEKKPEKPPE 93
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSK----------------G 106
+ + + A + +
Sbjct: 94 PKPPEQAKKQPPPPPPPPPPPPPAKKASEQAKPPMPTLNPVTAFGDKNSGPDKFLAGNSS 153
Query: 107 EQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVE 166
E K + S K K + + + V V E
Sbjct: 154 EGERKPAKTSPQHTSGQVPPKSVAEEPKPEAPPSKPVPDDVKLPEVAVMDVSPERNGPPT 213
Query: 167 KSSRKRIPSQDAI 179
+S + +
Sbjct: 214 DASGDAKTTFEET 226
>gi|268590337|ref|ZP_06124558.1| protein TolA [Providencia rettgeri DSM 1131]
gi|291314246|gb|EFE54699.1| protein TolA [Providencia rettgeri DSM 1131]
Length = 372
Score = 36.4 bits (82), Expect = 4.3, Method: Composition-based stats.
Identities = 11/116 (9%), Positives = 34/116 (29%), Gaps = 13/116 (11%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSV----DNIYNEDYHSSKYKKI 57
L L +S++LHV+ + L+ S ++ + + D +
Sbjct: 10 NLNRSLVMSIVLHVLLIGLIVIG---------SLVSVVKLGGGGEEGTVIDAVMVDPGVV 60
Query: 58 EEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKES 113
E + + +E + + + + + + + + +
Sbjct: 61 VEQYEEMQRQQNNVRQAAKERKEQEQKQEAELREQQEKEQKRLQQLEEERIKTERA 116
>gi|115379415|ref|ZP_01466517.1| putative secreted protein [Stigmatella aurantiaca DW4/3-1]
gi|115363579|gb|EAU62712.1| putative secreted protein [Stigmatella aurantiaca DW4/3-1]
Length = 769
Score = 36.4 bits (82), Expect = 4.3, Method: Composition-based stats.
Identities = 28/187 (14%), Positives = 73/187 (39%), Gaps = 3/187 (1%)
Query: 37 EMLSVDNIYNEDYHSSKYKKIEEPVVQFKGS--SQENLVRDFSVQENGDRFSDQTKTHAT 94
E+ +V N+ ++ S+ I + V+ + + E + + ++ + S Q + A
Sbjct: 225 ELTTVQNVSTNEFKQSERMAITKRNVESDEAIFALERQRAEAAAKQKREIESIQAREVAE 284
Query: 95 ENETKRSSSSKGEQALKESALLRMPVSPYDKQKIS-KATNKEQDLQGISFAEKKSIDTVV 153
+ K +K E A ++ ++I N+E+ + + +K
Sbjct: 285 ADRVKAEEHAKAELARIKAEEEISINEENKSRQIQVAQKNRERVVGVETERVEKDRALEA 344
Query: 154 VRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQK 213
+ +++ L ++ K + ++R R++ + + +R K LRV + N+
Sbjct: 345 INRERETELQRIAKEKALEGEKKAIADVIRARIVVEKTVAEEEERIKDLRVTAEAKRNKD 404
Query: 214 GFVLGKI 220
++
Sbjct: 405 ALLINAE 411
>gi|110833921|ref|YP_692780.1| phosphoric diester hydrolase [Alcanivorax borkumensis SK2]
gi|110647032|emb|CAL16508.1| phosphoric diester hydrolase [Alcanivorax borkumensis SK2]
Length = 1074
Score = 36.4 bits (82), Expect = 4.3, Method: Composition-based stats.
Identities = 13/153 (8%), Positives = 37/153 (24%), Gaps = 3/153 (1%)
Query: 29 LLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQ 88
P + VD +E + ++K +EP Q K ++
Sbjct: 782 APKPPRNEQPAPVD---DEGHPATKLVPAQEPSAQAKRDDTPKKAATDKTAPLNEQSPVT 838
Query: 89 TKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKS 148
+ A + + + + + + +P + + ++ A +
Sbjct: 839 NQPQAAAEPKQEQTVAPAKVQQPAAEQPPVTKAPVAQTTAAPKVEDDKPASAQPTASDTT 898
Query: 149 IDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAI 181
S ++ +
Sbjct: 899 TAAPAQEQPTPTADSTPQQPKADTPKAASTDDK 931
>gi|170020383|ref|YP_001725337.1| transport protein TonB [Escherichia coli ATCC 8739]
gi|253773750|ref|YP_003036581.1| transporter TonB [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
gi|300927756|ref|ZP_07143321.1| gram-negative bacterial TonB protein [Escherichia coli MS 187-1]
gi|301647254|ref|ZP_07247073.1| gram-negative bacterial TonB protein [Escherichia coli MS 146-1]
gi|902401|gb|AAB60085.1| membrane protein [Escherichia coli]
gi|169755311|gb|ACA78010.1| TonB family protein [Escherichia coli ATCC 8739]
gi|253324794|gb|ACT29396.1| TonB family protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
gi|300464197|gb|EFK27690.1| gram-negative bacterial TonB protein [Escherichia coli MS 187-1]
gi|301074616|gb|EFK89422.1| gram-negative bacterial TonB protein [Escherichia coli MS 146-1]
gi|323962623|gb|EGB58202.1| TonB family protein domain-containing protein [Escherichia coli
H489]
gi|323973507|gb|EGB68693.1| TonB family protein domain-containing protein [Escherichia coli
TA007]
Length = 244
Score = 36.4 bits (82), Expect = 4.3, Method: Composition-based stats.
Identities = 18/225 (8%), Positives = 51/225 (22%), Gaps = 20/225 (8%)
Query: 8 AISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGS 67
+S+ +H + L + Q++ + + +SV + D + + V
Sbjct: 19 LLSVCIHGAVVAGLLYTSVHQVIELPAPAQPISVTMVTPADLEPPQAVQPPPEPVVEPEP 78
Query: 68 SQ--------------ENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKES 113
E + + + + R +S A
Sbjct: 79 EPEPIPEPPKEAPVVIEKPKPKPKPKPKPVKKVQEQPKRDVKPVESRPASPFENTAPARP 138
Query: 114 ALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRI 173
+ + + + + + + K ++ + +I
Sbjct: 139 TSSTATAATSKPVTSVASGPRALSRNQPQYPARAQALRIEGQVKVKFDVTPDGRVDNVQI 198
Query: 174 PSQDAIAIVRNRVI---ANWNIPSDFKRFKKLRVKMHFQLNQKGF 215
S + V W + ++ G
Sbjct: 199 LSAKPANMFEREVKNAMRRWRYEPGKPGSG---IVVNILFKINGT 240
>gi|332139962|ref|YP_004425700.1| hypothetical protein MADE_1002770 [Alteromonas macleodii str. 'Deep
ecotype']
gi|327549984|gb|AEA96702.1| hypothetical protein MADE_1002770 [Alteromonas macleodii str. 'Deep
ecotype']
Length = 264
Score = 36.4 bits (82), Expect = 4.3, Method: Composition-based stats.
Identities = 23/192 (11%), Positives = 56/192 (29%), Gaps = 1/192 (0%)
Query: 5 NGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQF 64
L +S+ ++ LL L F + + +L + + + I+ V
Sbjct: 32 RALLLSLGINGSLLLALAFTTENESINQQHFPPVLL-KAVLVMPTSAPQKTDIDSEPVNE 90
Query: 65 KGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYD 124
KGS E+ ++ S T+ K Q + ++ +
Sbjct: 91 KGSDLEHSAAIEKTKKGEKVSSANKVVGKTKEPQKLLVKEPSPQFKARTKETKLKIRDAT 150
Query: 125 KQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRN 184
+ I++ + K+ V P + + K I + ++
Sbjct: 151 QDYINRLNAQRLHDIANQSPSNKTHSNVKRNPKLSNSSNTENEDFLKSIEIVLDCSSIKG 210
Query: 185 RVIANWNIPSDF 196
++ + +
Sbjct: 211 KLFSTLSKNKGV 222
>gi|260886612|ref|ZP_05897875.1| putative protein TonB [Selenomonas sputigena ATCC 35185]
gi|330839554|ref|YP_004414134.1| TonB family protein [Selenomonas sputigena ATCC 35185]
gi|260863755|gb|EEX78255.1| putative protein TonB [Selenomonas sputigena ATCC 35185]
gi|329747318|gb|AEC00675.1| TonB family protein [Selenomonas sputigena ATCC 35185]
Length = 272
Score = 36.4 bits (82), Expect = 4.4, Method: Composition-based stats.
Identities = 30/256 (11%), Positives = 61/256 (23%), Gaps = 14/256 (5%)
Query: 4 ENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYN---EDYHSSKYKKIEEP 60
+ S +LHV+ +L + ++ VD + +
Sbjct: 8 KKAYIASALLHVVIAVLFAIGLAEIVAE--KEQQTYVVDLATSNFSQGSGHEGGGGGAAA 65
Query: 61 VVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPV 120
+ + + Q T+ + S + S+
Sbjct: 66 FPEPLKPEEVAKRVETVQQAQTQTQPVVTEPAPVQTPDAVPSPTPSPTTSAPSSGAPSAS 125
Query: 121 SPYDKQKISKATNKEQDLQGISFAEKKSIDTVVV---RPDKKELLSKVEKSSRKRIPSQD 177
S + + + G T + + S
Sbjct: 126 SAGGTGEGTGSGTGTGSGTGSGSGSGSGSGTGDGHGYGEGSGAGQGSGDGNVSGTGTSPF 185
Query: 178 AIAIVRNRVIANWNIPSDF-KRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLR 236
A R + AN P KR + + ++ G V V G+ +L
Sbjct: 186 DAAGFRAAIDANKQYPYMAIKRRLEGSASVVCTIDTSGS-----IVSVSLGSSSGSDILD 240
Query: 237 ENARKAVIKSQAFRLS 252
+ A +A +F
Sbjct: 241 DAALEAARAVGSFPNP 256
>gi|163755861|ref|ZP_02162978.1| transcription termination factor Rho [Kordia algicida OT-1]
gi|161324032|gb|EDP95364.1| transcription termination factor Rho [Kordia algicida OT-1]
Length = 575
Score = 36.4 bits (82), Expect = 4.4, Method: Composition-based stats.
Identities = 16/187 (8%), Positives = 48/187 (25%)
Query: 28 QLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSD 87
+ + + + + + + + S+
Sbjct: 35 LIYKILDLQASNPESVAPITKVEPKPKAEETTTKRKRIKREPNQRSEKTTASSSQQKKSE 94
Query: 88 QTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKK 147
T + + + + S + + K D +K + ++ Q + +K
Sbjct: 95 PTTSEKSNTQASKQSKQPRKTSDKNQKNNPPQAKKEDSKKNTNDSSDNNSKQQHNNNKKD 154
Query: 148 SIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMH 207
+ + K+ S+ ++ N+ N DF+ + +
Sbjct: 155 HSQQNNKQHNNKKDHSQQNNKQHNNNKKDNSNKNNGNKDQRNRYREPDFEFDGIIESEGV 214
Query: 208 FQLNQKG 214
+ Q G
Sbjct: 215 LDIMQDG 221
>gi|188580874|ref|YP_001924319.1| TonB family protein [Methylobacterium populi BJ001]
gi|179344372|gb|ACB79784.1| TonB family protein [Methylobacterium populi BJ001]
Length = 394
Score = 36.4 bits (82), Expect = 4.4, Method: Composition-based stats.
Identities = 24/234 (10%), Positives = 50/234 (21%), Gaps = 25/234 (10%)
Query: 31 VPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSV------------ 78
P EM V + E P +E ++ +
Sbjct: 147 QPPPPTEMTEVTPEEVQPPPPPPEAVTEVPPDTPPPPPEEQIITSQAQEAEPLAPPPPVV 206
Query: 79 ----QENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNK 134
+ + + A + + + + + E K +KA
Sbjct: 207 AKAPEPPKPDPKIEERRKAALEKKREAEREARRKEILEKKREEAQKEARIKAAKAKAERD 266
Query: 135 EQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPS 194
+ A + + + + + N +
Sbjct: 267 AARRAQAAQAGNSQRSSAATSRQSATGSAASASDPNA---MAAWKGSIASTIRGRMNREA 323
Query: 195 DFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQA 248
+ F +++ G V G V G + A AV S
Sbjct: 324 -AAGTSGGVATVRFTVSRSGAVSGAALVGSSGVG-----AIDGAALAAVRGSLP 371
>gi|298372200|ref|ZP_06982190.1| TonB family C- domain protein [Bacteroidetes oral taxon 274 str.
F0058]
gi|298275104|gb|EFI16655.1| TonB family C- domain protein [Bacteroidetes oral taxon 274 str.
F0058]
Length = 301
Score = 36.4 bits (82), Expect = 4.4, Method: Composition-based stats.
Identities = 21/208 (10%), Positives = 55/208 (26%), Gaps = 20/208 (9%)
Query: 54 YKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKES 113
K+I+ P K Q + + + E+ + ++
Sbjct: 73 KKQIDAPSFSEKPVQQARTTSSQTSGGQAKATAGGDDFFTQDEESLNVPTGSNTDKNSQA 132
Query: 114 ALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSK--------- 164
A + + +++ Q+L G + K K
Sbjct: 133 AEQQRLAQEARAAEQKAKSDRAQNLIGGALGYKSGKSGGKGDGGNAMGTGKGPGSGDGKG 192
Query: 165 ----------VEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKG 214
+ + S + R ++ ++ + ++ + +++ G
Sbjct: 193 NGIGDGIGDGTRGNPFGKGTSNGNTWSLEGRTLSGNISKPAYRENVEGKITVRIRVDDNG 252
Query: 215 FVLGKINVDVVG-GTELVRRMLRENARK 241
V+ E +R E+AR+
Sbjct: 253 NVISATIGSPTTIADESLRNSTLESARR 280
>gi|224082095|ref|XP_002195830.1| PREDICTED: hypothetical protein, partial [Taeniopygia guttata]
Length = 949
Score = 36.4 bits (82), Expect = 4.4, Method: Composition-based stats.
Identities = 21/187 (11%), Positives = 47/187 (25%), Gaps = 3/187 (1%)
Query: 20 LLYFNFNVQLLVPISRREMLSVDNIYNEDYHSS-KYKKIEEPVVQFKGSSQENLVRDFSV 78
L F+ + PI+ + + +P++ S + +
Sbjct: 494 LSLFSMSAPPGPPITSSILKPSTSFSYRKAPPPIPPGTKAKPLISVTAQSSTESTHESYL 553
Query: 79 QENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDL 138
R +K A + S S A+ P + + ++
Sbjct: 554 PSEVARSPAWSKDAAARCNSAESLESSNVTAVALDLPPVQPRAAPKPSTLIIKAIPGREE 613
Query: 139 QGISFAEKK--SIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDF 196
++K V V + I Q R R + ++ +
Sbjct: 614 LRSLARQRKWRPSIGVQVEAVSDSDTESRSQREFHSIGVQVEEDKRRARFKRSNSVTAGV 673
Query: 197 KRFKKLR 203
+ +L
Sbjct: 674 QADLELE 680
>gi|309359359|emb|CAP33039.2| hypothetical protein CBG_14553 [Caenorhabditis briggsae AF16]
Length = 5515
Score = 36.4 bits (82), Expect = 4.5, Method: Composition-based stats.
Identities = 20/159 (12%), Positives = 48/159 (30%), Gaps = 2/159 (1%)
Query: 24 NFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGD 83
N PI + +++ ++ + + K P K S + +
Sbjct: 3412 NTPGITGPPIPKPPVVTPTTAEKPEFFRALFGKKRAPPPPPKPSETAPVSIKPTEPLTIK 3471
Query: 84 RFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK--QKISKATNKEQDLQGI 141
+ A K + S +++ PV+P K + + + +
Sbjct: 3472 TNESKVSPPARPKIKKPETGSLMKKSPTSDGQDSSPVTPPGKMVKIVDGKPIFNVPVYAV 3531
Query: 142 SFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIA 180
+E++ +P E + KS+ K+ +
Sbjct: 3532 PMSERRKRKEAQSKPKTDEDSDQPSKSNLKQSSPEPEEG 3570
>gi|195486592|ref|XP_002091570.1| GE12178 [Drosophila yakuba]
gi|194177671|gb|EDW91282.1| GE12178 [Drosophila yakuba]
Length = 2515
Score = 36.4 bits (82), Expect = 4.5, Method: Composition-based stats.
Identities = 11/113 (9%), Positives = 31/113 (27%), Gaps = 3/113 (2%)
Query: 38 MLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENE 97
+ +VD +E+ + + + ++ + + +
Sbjct: 1507 IETVDLTLDEEEDKGRKETGSKSSSANASPKKKQNNDKDREPKKSKPAEPAPTSAPSPVP 1566
Query: 98 TKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSID 150
K S E A K + + D +I+ + + A++
Sbjct: 1567 LKAPSPVPAEPAPKPAIPVP---EAVDVPEINPTVEEAAPESKPAPAKEDPYK 1616
>gi|149910560|ref|ZP_01899199.1| TolA-like protein [Moritella sp. PE36]
gi|149806403|gb|EDM66376.1| TolA-like protein [Moritella sp. PE36]
Length = 366
Score = 36.4 bits (82), Expect = 4.5, Method: Composition-based stats.
Identities = 23/233 (9%), Positives = 72/233 (30%), Gaps = 14/233 (6%)
Query: 41 VDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKR 100
V+ + + K ++ + S++ ++ + + + ++
Sbjct: 143 VEERKKAEAATKKAEQQRAKKELERKKSEQAAAAADKKRKAAEEKERKRQAAVVAENKRK 202
Query: 101 SSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKE 160
+ ++ ++ A + K + + + + + +
Sbjct: 203 KAEEAKQERKRQEAEKKRVAEQKRKTAEKERQRLAKVERDRQERLMQEQIEAEFASELES 262
Query: 161 LLSKVEKSSRKRIPSQ--DAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLG 218
+ +++ ++ + S+ A +++ + N K ++ +L+ G VL
Sbjct: 263 EIQQLDAVRQQEVLSEVDKYQARIQSSIQRNMLTSDAMKGK---SCALNIRLSDSGLVLS 319
Query: 219 KINVDVVGGTELVRRMLRENARKAVIKSQAFRLS--PSTYKSWRNITLFFVPS 269
+ ++ AV K + +S P +NI L F P
Sbjct: 320 VT-------SGKGDSIVCRAGVNAVNKVGSLPMSTDPDVASKLKNINLIFRPE 365
>gi|255690911|ref|ZP_05414586.1| putative outer membrane protein [Bacteroides finegoldii DSM 17565]
gi|260623553|gb|EEX46424.1| putative outer membrane protein [Bacteroides finegoldii DSM 17565]
Length = 378
Score = 36.4 bits (82), Expect = 4.5, Method: Composition-based stats.
Identities = 13/180 (7%), Positives = 48/180 (26%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
+ S+ ++ + F P ++ I + PV +
Sbjct: 66 AIIWSVAACLVIGFGISSYFLFPKETPEPVIPIIPQKEIALVPTKTKTDSTPISPVSMKQ 125
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
++ + + + T E + +++ E + A V
Sbjct: 126 ADKKDIIAKSRTTISKPPSAPITTMPMEEETSDQMVAATDEEVIMTTGASDPESVKKMRI 185
Query: 126 QKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNR 185
K++ + ++ + + + V + + + + + + + +
Sbjct: 186 AKMAVIPTNDIIKGKVTDQKGEPLIGASVMYKGTNIGTVTDVNGEFSLLKKAENKQLTAQ 245
>gi|293433007|ref|ZP_06661435.1| TolA [Escherichia coli B088]
gi|291323826|gb|EFE63248.1| TolA [Escherichia coli B088]
gi|323946995|gb|EGB43009.1| TolA protein [Escherichia coli H120]
Length = 421
Score = 36.4 bits (82), Expect = 4.6, Method: Composition-based stats.
Identities = 15/119 (12%), Positives = 46/119 (38%), Gaps = 3/119 (2%)
Query: 2 RLENGLAISMILHVMFLLLLYF-NFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP 60
+L+ + IS +LHV+ L + +F+ + + S+D + + + K +
Sbjct: 10 KLKRAIIISAVLHVILFAALIWSSFDENIEASAGGGDGSSIDAVMVDSGAVVEQYKRMQS 69
Query: 61 VVQFKGS--SQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLR 117
Q + + +E ++ + + + + + ++ + +QA + +
Sbjct: 70 QESSAKRSDEQRKMKEQQAAEELREKQAAEQERLKQLEKERLAAQEQKKQAEEAAKQAE 128
>gi|308062625|gb|ADO04513.1| siderophore-mediated iron transport protein (tonB) [Helicobacter
pylori Cuz20]
Length = 284
Score = 36.4 bits (82), Expect = 4.7, Method: Composition-based stats.
Identities = 25/256 (9%), Positives = 72/256 (28%), Gaps = 12/256 (4%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
IS L+ + + + +++ ++K +
Sbjct: 18 SFLISFALYAIGFGYFLLREEAPAPLAQAGTTKVTMSLASINTNSNTKTNAESAKPKEEP 77
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
+ + ++ + + K + + + V +
Sbjct: 78 KEKPKEKPKKEEPKKEVSKPKPKPKPKPKPKPEPKPKPEPKPKPEPKPEPKVEEVKKEEP 137
Query: 126 QKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEK------SSRKRIPSQDAI 179
++ K +++ + S ++ + V DK+E +K + + S + +
Sbjct: 138 KEEPKKEETKEEAKEKSAPKQVTTKDTVKEKDKQEESNKTSEGATSEAQAYNPGVSNEFL 197
Query: 180 AIVRNRVIANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLREN 238
++ + + P + + V + F +N G V V +L
Sbjct: 198 MKIQTAISSKNRYPKMAQIRGIEGEVLVSFVINPDGSVTDIKVVKSNTTD-----ILNHA 252
Query: 239 ARKAVIKSQAFRLSPS 254
A +A+ + P
Sbjct: 253 ALEAIKNAAHLFPKPE 268
>gi|296196860|ref|XP_002746014.1| PREDICTED: coiled-coil and C2 domain-containing protein 2A
[Callithrix jacchus]
Length = 1620
Score = 36.4 bits (82), Expect = 4.7, Method: Composition-based stats.
Identities = 22/205 (10%), Positives = 55/205 (26%), Gaps = 6/205 (2%)
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
++ + EN + + + ++ + +E + + ++
Sbjct: 3 PREEKVKIITEEFIENDEDADMERQKKNSKVRRQPRKKQPPTAVPEEMVSEKSHLGNQEE 62
Query: 126 QKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNR 185
+ + R E + + + A + +
Sbjct: 63 PVQEEPKTCLLSMTAQRGPRSLPPIPSTSRTGFAEFSMRGRMREKLQAARSKAESALLQE 122
Query: 186 VIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKI-NVDVVGGTELVRRMLRENARKAVI 244
+ R ++L + F V +D + + R ++ARK
Sbjct: 123 IPTPRPRRLRSPRKEELETE--FGTEPGKEVESTQQEIDSQSHSRVKFR---DSARKIKP 177
Query: 245 KSQAFRLSPSTYKSWRNITLFFVPS 269
K Q PS +++ T F P
Sbjct: 178 KPQVPPGFPSAEEAYNFFTFNFDPE 202
>gi|197117711|ref|YP_002138138.1| hypothetical protein Gbem_1323 [Geobacter bemidjiensis Bem]
gi|197087071|gb|ACH38342.1| conserved hypothetical protein [Geobacter bemidjiensis Bem]
Length = 245
Score = 36.4 bits (82), Expect = 4.7, Method: Composition-based stats.
Identities = 26/252 (10%), Positives = 57/252 (22%), Gaps = 49/252 (19%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
GL +S+ LH+ ++L + R + VD
Sbjct: 24 GLVVSLALHLFCAVILI---GLPGGGEPPRPPVTYVDLNSI------------------- 61
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
K + P
Sbjct: 62 --------------------PTPRPAAPAIQPAASEPELPEPDPAKAEPIPVPETPPAPP 101
Query: 126 QKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNR 185
Q++ Q ++ T K + R + +
Sbjct: 102 QQVEVQQPTAQPAPPQPAPAEERSATTFGMGLTKGYFKSLSDGDTLRPDVKAYYLEILQG 161
Query: 186 VIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIK 245
V W + K K + ++ + + G ++G + G + +K +
Sbjct: 162 VNNKWWLEQ--KDQKVRTIVVNISVARNGEIVGSFILQSSGN-----IVYDRMVQKTLES 214
Query: 246 SQAFRLSPSTYK 257
S P++++
Sbjct: 215 SGPLPPLPASFQ 226
>gi|301614223|ref|XP_002936596.1| PREDICTED: hypothetical protein LOC100485119 [Xenopus (Silurana)
tropicalis]
Length = 1043
Score = 36.4 bits (82), Expect = 4.7, Method: Composition-based stats.
Identities = 15/160 (9%), Positives = 53/160 (33%), Gaps = 5/160 (3%)
Query: 44 IYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSS 103
+ + + S+ K+ +P + + ++++ ++ +++E +
Sbjct: 499 VESSEDKSAIAKETSQPDTKSEVANKDPVLEKSKENSESKTIPQNLTEDQSKSEKSKVEP 558
Query: 104 SKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLS 163
+ ++++ + + +K T K Q + + K + V + K
Sbjct: 559 KQKVESVEPIKEASKDDPVVEPEMETKKTKKPQTSKKAATGAKNLTLKLEVPSESKPKEK 618
Query: 164 KVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLR 203
+ + + R + R+++ N S +
Sbjct: 619 RKRQQVKLRGRKRR-----RSQIQRNSASKSRSRYKHDPV 653
>gi|71655062|ref|XP_816140.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70881246|gb|EAN94289.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 987
Score = 36.4 bits (82), Expect = 4.7, Method: Composition-based stats.
Identities = 8/125 (6%), Positives = 32/125 (25%)
Query: 53 KYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKE 112
+ K + E E + + + +A +E
Sbjct: 137 EEAKRRAEQEEEARRRAEQEEMARRRAEQEEEAKRRAEQEEMARRRAEQEEEAKRRAEQE 196
Query: 113 SALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKR 172
R + ++ ++ + K+ + + + E + ++ + +
Sbjct: 197 EMARRRAEQEEEARRRAEQEEMARRRAEQEEEAKRRAEQEEMARRRAEQEEEAKRRAEQE 256
Query: 173 IPSQD 177
++
Sbjct: 257 EEAKR 261
>gi|198460262|ref|XP_002135994.1| GA23307 [Drosophila pseudoobscura pseudoobscura]
gi|198140131|gb|EDY70921.1| GA23307 [Drosophila pseudoobscura pseudoobscura]
Length = 293
Score = 36.4 bits (82), Expect = 4.8, Method: Composition-based stats.
Identities = 18/182 (9%), Positives = 48/182 (26%)
Query: 29 LLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQ 88
PIS +++ ++ +S+ + + +Q + + +
Sbjct: 31 PQRPISNTPIITASQVHAPGPTNSRPPPPTNSPPRHETRAQGTRNTEPTRHTSPRPTPRN 90
Query: 89 TKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKS 148
K + S + R P+ + + + Q L+ +
Sbjct: 91 PKRSRATKKASLSPEGTDAVTPTKGKEPRTPLQKTARPQQRQPPRSSQALEVSPPTATLA 150
Query: 149 IDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHF 208
+ V D K + R Q+ + + N + + +
Sbjct: 151 HERVDTALDAKTTPTTPTDLLLPRPLRQEPGKAITAARGTHRNPDAPGADAPSIVPDIME 210
Query: 209 QL 210
+L
Sbjct: 211 RL 212
>gi|113970218|ref|YP_734011.1| hypothetical protein Shewmr4_1880 [Shewanella sp. MR-4]
gi|113884902|gb|ABI38954.1| conserved hypothetical protein [Shewanella sp. MR-4]
Length = 372
Score = 36.4 bits (82), Expect = 4.8, Method: Composition-based stats.
Identities = 20/175 (11%), Positives = 46/175 (26%), Gaps = 1/175 (0%)
Query: 57 IEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALL 116
GS+++ V + +V T + + + + L +
Sbjct: 131 APPTQTAPAGSAKDPSVEEPAVSSEPITSPPNTVKPMPKPTEQITKPPEVSAQLSKVKAS 190
Query: 117 RMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQ 176
+ PVS S +Q + +K + + E + + +S
Sbjct: 191 KAPVSSTSAPNASTQGQTQQSAKEAVKPQKVETQSSSAQAVSTEPSAAIGQSGGAAGSVG 250
Query: 177 DAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQ-LNQKGFVLGKINVDVVGGTEL 230
R ++ + + ++ + VL N D G
Sbjct: 251 LFTQRYFERQREQALDDLVLEQANHYSKRSNLSEMSPEMEVLIVPNADDFSGPTS 305
>gi|254468919|ref|ZP_05082325.1| TonB family C-terminal domain protein [beta proteobacterium KB13]
gi|207087729|gb|EDZ65012.1| TonB family C-terminal domain protein [beta proteobacterium KB13]
Length = 246
Score = 36.4 bits (82), Expect = 4.8, Method: Composition-based stats.
Identities = 27/179 (15%), Positives = 57/179 (31%), Gaps = 8/179 (4%)
Query: 83 DRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGIS 142
+ + + + + K +Q + + +S + + + K +
Sbjct: 55 ETIDLKKEVKPEVIKKIKQDQKKFQQQIIQETKESTIISAPESKPEEEVEEKTLKPINLD 114
Query: 143 FAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKL 202
+ +S + +V K + +KV S K Q + +N+V + +
Sbjct: 115 PSFIQSQLSDIVDKKKIDKRTKVISSKTKERDFQSYYQVWKNKVEKIGALNYPAAARNGI 174
Query: 203 R--VKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAF-RLSPSTYKS 258
+ M LN +G VL G L + A+K V + PS +
Sbjct: 175 SESLVMTVILNDQGEVLDIKINKSSG-----VPQLDDAAKKIVNLGSPYAPFPPSIKEQ 228
>gi|123434028|ref|XP_001308733.1| erythrocyte binding protein [Trichomonas vaginalis G3]
gi|121890427|gb|EAX95803.1| erythrocyte binding protein, putative [Trichomonas vaginalis G3]
Length = 1346
Score = 36.4 bits (82), Expect = 4.8, Method: Composition-based stats.
Identities = 10/120 (8%), Positives = 37/120 (30%), Gaps = 1/120 (0%)
Query: 51 SSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQAL 110
+ + + +E QE + + S + + ++ K ++E + + +
Sbjct: 359 NGEEAEKQEESPNEVEQKQEEVKPEESP-KVEEPKKEEPKQEEVKSEEIQKNEEPKSEET 417
Query: 111 KESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSR 170
K+ + +++ + + + + ++ E SS+
Sbjct: 418 KKEEAPKAEEQKKEEEPKKEEAKSDDEKIEEIEVVGEKKKHHRKSKAEEPSEENKEDSSK 477
>gi|268579235|ref|XP_002644600.1| Hypothetical protein CBG14553 [Caenorhabditis briggsae]
Length = 5442
Score = 36.4 bits (82), Expect = 4.8, Method: Composition-based stats.
Identities = 20/159 (12%), Positives = 48/159 (30%), Gaps = 2/159 (1%)
Query: 24 NFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGD 83
N PI + +++ ++ + + K P K S + +
Sbjct: 3319 NTPGITGPPIPKPPVVTPTTAEKPEFFRALFGKKRAPPPPPKPSETAPVSIKPTEPLTIK 3378
Query: 84 RFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK--QKISKATNKEQDLQGI 141
+ A K + S +++ PV+P K + + + +
Sbjct: 3379 TNESKVSPPARPKIKKPETGSLMKKSPTSDGQDSSPVTPPGKMVKIVDGKPIFNVPVYAV 3438
Query: 142 SFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIA 180
+E++ +P E + KS+ K+ +
Sbjct: 3439 PMSERRKRKEAQSKPKTDEDSDQPSKSNLKQSSPEPEEG 3477
>gi|146279026|ref|YP_001169185.1| TonB family protein [Rhodobacter sphaeroides ATCC 17025]
gi|145557267|gb|ABP71880.1| TonB family protein [Rhodobacter sphaeroides ATCC 17025]
Length = 294
Score = 36.4 bits (82), Expect = 4.8, Method: Composition-based stats.
Identities = 30/234 (12%), Positives = 62/234 (26%), Gaps = 17/234 (7%)
Query: 32 PISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKT 91
P + +E + +D ++ P V + + + + E
Sbjct: 50 PDALQEAVYLDLEPAPPAPAALAAPEPAPEVPQIDAPEAAEPEEMAEPEPDLSPPPPDLR 109
Query: 92 HATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDT 151
TE P +I + + AE+K
Sbjct: 110 PPTETV-DLPDIPVPTPETFSYEPPPPPPEEEQVAEIPPDVRPVPRPERETPAERKPDPP 168
Query: 152 VVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIA---NW------NIPSDFKRFKKL 202
S+ + + P + A R ++ W I + + +
Sbjct: 169 TREVKKAAAPPSRQAAAPPAQTPGRAAATASRGQIENLTAKWGAEIRQRIQRRTRGARGM 228
Query: 203 --RVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPS 254
V + + Q G + G + G L + A +AV + F +P+
Sbjct: 229 TGEVTVRLTVAQGGSLGGVAILRSSGDAR-----LDQLALRAVQSAGRFPAAPA 277
>gi|261823524|ref|YP_003261630.1| TonB family protein [Pectobacterium wasabiae WPP163]
gi|261607537|gb|ACX90023.1| TonB family protein [Pectobacterium wasabiae WPP163]
Length = 288
Score = 36.4 bits (82), Expect = 4.8, Method: Composition-based stats.
Identities = 33/224 (14%), Positives = 53/224 (23%), Gaps = 33/224 (14%)
Query: 25 FNVQLLVPISRR---EMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQEN 81
FN P++ + +SV+ + + EPV Q S E E
Sbjct: 68 FNSAAAPPVTVPARPQPVSVELVSM----------VAEPVQQEVVSVAEPETPTPQPLEE 117
Query: 82 GDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGI 141
A + + + +P K T I
Sbjct: 118 PTITEPLVDERALLPPAPEKPAPEKKPEPVLKKTPVKKSAPAPKPTQQPQTETASAAAPI 177
Query: 142 SFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKK 201
+ A V PS +AI R +
Sbjct: 178 TPAPIAQKTAVQPVDAPLTPPLANADYLHNPAPSYPDVAISRGY---------------E 222
Query: 202 LRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIK 245
V ++ Q+ G V G L + AR V++
Sbjct: 223 GTVLLNVQVRADGKVQTIRIHQSSG-----YPSLDDAARDTVVR 261
>gi|57237586|ref|YP_178600.1| hypothetical protein CJE0584 [Campylobacter jejuni RM1221]
gi|57166390|gb|AAW35169.1| hypothetical protein CJE0584 [Campylobacter jejuni RM1221]
Length = 1233
Score = 36.4 bits (82), Expect = 4.8, Method: Composition-based stats.
Identities = 20/173 (11%), Positives = 49/173 (28%), Gaps = 12/173 (6%)
Query: 42 DNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENG-----DRFSDQTKTHATEN 96
I N + K + ++ L + E D+ S QTK
Sbjct: 938 TIISNSPKKQNNIKNKIKNAEAVYYNNARALPTSRASSETNQVSFSDKNSTQTKPKTNLM 997
Query: 97 ETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATN-------KEQDLQGISFAEKKSI 149
E + + E K ++ + + + + ++ + +
Sbjct: 998 EDIKENIEAKEVEKKNKKSVKQRLDKKIQNDKKASEDILKRYDNFLKENKDNKLDFLDKM 1057
Query: 150 DTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKL 202
+ V + + K S + +D + +R ++ NI + +
Sbjct: 1058 NLNTVEYNLTRQMIINAKESTNKGVKKDIPSALRGKIEQELNIQPLKEFGENY 1110
>gi|5107694|pdb|1TOL|A Chain A, Fusion Of N-Terminal Domain Of The Minor Coat Protein From
Gene Iii In Phage M13, And C-Terminal Domain Of E. Coli
Protein-Tola
Length = 222
Score = 36.4 bits (82), Expect = 4.8, Method: Composition-based stats.
Identities = 17/140 (12%), Positives = 35/140 (25%), Gaps = 32/140 (22%)
Query: 141 ISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPS-QDAIAIVRNRVIANWNIPSDFKRF 199
S + S K++ + +++ + + + D +
Sbjct: 94 SSGKNAPKTGGGAKGNNASPAGSGNTKNNGASGADINNYAGQIKSAIESKF---YDASSY 150
Query: 200 KKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQA---------FR 250
+ +L G +L G + QA
Sbjct: 151 AGKTCTLRIKLAPDGMLLD----IKPEGGDPA-------------LCQAALAAAKLAKIP 193
Query: 251 LSPST--YKSWRNITLFFVP 268
PS Y+ ++N L F P
Sbjct: 194 KPPSQAVYEVFKNAPLDFKP 213
>gi|254246219|ref|ZP_04939540.1| TonB [Burkholderia cenocepacia PC184]
gi|124870995|gb|EAY62711.1| TonB [Burkholderia cenocepacia PC184]
Length = 351
Score = 36.4 bits (82), Expect = 4.8, Method: Composition-based stats.
Identities = 19/135 (14%), Positives = 35/135 (25%), Gaps = 9/135 (6%)
Query: 136 QDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSD 195
+ A+ + + S S + VR RV N
Sbjct: 226 DRERSARLAQMQGQSGAGEGGGEGLAKSGTGTGSGGNAATPGYADKVRRRVKPN---IVW 282
Query: 196 FKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPST 255
L + + G VL G + + A+ S S
Sbjct: 283 GGERAGLTTVVKIRCTPSGDVLSASVSRSSGNSGW-----DQAVVSAIHASVPLP-PDSN 336
Query: 256 YKSWRNITLFFVPSK 270
++ +IT+ F ++
Sbjct: 337 GRTPSDITITFKAAE 351
>gi|325970427|ref|YP_004246618.1| TonB family protein [Spirochaeta sp. Buddy]
gi|324025665|gb|ADY12424.1| TonB family protein [Spirochaeta sp. Buddy]
Length = 218
Score = 36.0 bits (81), Expect = 4.9, Method: Composition-based stats.
Identities = 16/115 (13%), Positives = 36/115 (31%), Gaps = 5/115 (4%)
Query: 1 MRLENGLAISMILHVMFLLLLYFNFNVQLLVPISRRE-----MLSVDNIYNEDYHSSKYK 55
M+L + + + + L+ + Q+ PI + VD I E
Sbjct: 1 MKLRYAFLLGIGVTALLTAFLFLPISFQIQEPIPVAAAKAATISLVDRIAVEHSTKETTP 60
Query: 56 KIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQAL 110
EE + + + +QE + + + + E + ++ E
Sbjct: 61 AREEVLKEEPSVPPIPQPENLPIQEQTESHTQTQEPMVQQVEKQAAAEQAEENTP 115
>gi|218190974|gb|EEC73401.1| hypothetical protein OsI_07654 [Oryza sativa Indica Group]
Length = 1101
Score = 36.0 bits (81), Expect = 4.9, Method: Composition-based stats.
Identities = 19/147 (12%), Positives = 39/147 (26%), Gaps = 2/147 (1%)
Query: 47 EDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSS-- 104
K++E +V + L ++ S D K A K
Sbjct: 91 PSQEEDPKKRLEAKLVAAEQKRLSLLAKEQSRLAKLDELRQAAKNDAELRFKKEREELGM 150
Query: 105 KGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSK 164
K E ++++ R + Q+ + + A + R + L +
Sbjct: 151 KVESRVRQAEEKRTQLMHARSQRRAALEERTTKYLVQRVAWENKYRERAKRQRAEYLKQR 210
Query: 165 VEKSSRKRIPSQDAIAIVRNRVIANWN 191
S S + ++ W
Sbjct: 211 GSTHSFTYTASVKNGDFLSRKLARCWR 237
>gi|310794463|gb|EFQ29924.1| myb-like DNA-binding domain-containing protein [Glomerella
graminicola M1.001]
Length = 2384
Score = 36.0 bits (81), Expect = 4.9, Method: Composition-based stats.
Identities = 12/181 (6%), Positives = 49/181 (27%), Gaps = 2/181 (1%)
Query: 23 FNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENG 82
F F + P + + + ++ Q +Q D E
Sbjct: 1653 FGFQEREREPTQPPPPIRISQKPSAAPVIEPAQQRPLAAAQPIQPAQPEPQVDRQQAERQ 1712
Query: 83 DRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGIS 142
+ Q + Q ++ + R + +Q + ++Q +
Sbjct: 1713 QQMERQAIERQQIERQRLEQQQLERQQIERQQIERQQIE--RQQIERQQIERQQIERQQI 1770
Query: 143 FAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKL 202
++ + + +++ + + + ++ + + + + +++
Sbjct: 1771 ERQQIERQQIERQQIERQQMERQQIERQQLERQAIERQQIERQQLERQQMERQQAERQQM 1830
Query: 203 R 203
Sbjct: 1831 E 1831
>gi|195999170|ref|XP_002109453.1| hypothetical protein TRIADDRAFT_53503 [Trichoplax adhaerens]
gi|190587577|gb|EDV27619.1| hypothetical protein TRIADDRAFT_53503 [Trichoplax adhaerens]
Length = 1128
Score = 36.0 bits (81), Expect = 5.0, Method: Composition-based stats.
Identities = 10/144 (6%), Positives = 38/144 (26%), Gaps = 2/144 (1%)
Query: 47 EDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENG--DRFSDQTKTHATENETKRSSSS 104
ED + + E + S + + E + + + ++
Sbjct: 876 EDKTAQTDQPQLEKQDEGLKDSALSQEEVDTPPEEVQGENMEQNQEEKPPKIPESAETNR 935
Query: 105 KGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSK 164
+ E+ +E+ V+ + + + + + I+ + K +
Sbjct: 936 EEEEKSQEAVKEDDTVNEVNNDVTDSIDSTNKIDEKPVEETQDQIEEDDTVKETKPQGEE 995
Query: 165 VEKSSRKRIPSQDAIAIVRNRVIA 188
+ + + + +
Sbjct: 996 IVVVADDENIRTRNLTALEQSIRR 1019
>gi|298249065|ref|ZP_06972869.1| hypothetical protein Krac_1574 [Ktedonobacter racemifer DSM 44963]
gi|297547069|gb|EFH80936.1| hypothetical protein Krac_1574 [Ktedonobacter racemifer DSM 44963]
Length = 678
Score = 36.0 bits (81), Expect = 5.0, Method: Composition-based stats.
Identities = 13/119 (10%), Positives = 28/119 (23%), Gaps = 7/119 (5%)
Query: 37 EMLSVDNIYNEDYHSSKYKKIEEPVVQFK---GSSQENLVRDFSVQENGD----RFSDQT 89
S + E S K S + L R + +
Sbjct: 121 PPASAEKKTTETPLSPPKKPARTSTPAPASADQSPTQPLERPAAPPKKPARTSTPAPASA 180
Query: 90 KTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKS 148
+ + ++ K A SP + A K+ + + +++
Sbjct: 181 DQSPAQPLERPAAPPKKPARTSTPAPASADQSPAQPFERPAAPPKKPASRDKAAQKEEK 239
>gi|291239095|ref|XP_002739460.1| PREDICTED: protein tyrosine phosphatase, receptor type, F-like,
partial [Saccoglossus kowalevskii]
Length = 2268
Score = 36.0 bits (81), Expect = 5.0, Method: Composition-based stats.
Identities = 8/103 (7%), Positives = 19/103 (18%)
Query: 49 YHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQ 108
+ ++ P + + +E + K
Sbjct: 748 KKETPAQESAPPPKEEPKQKKPIEEEPMLAKEVTPAQESAPPPKEEPKQKKPIEEEPMLA 807
Query: 109 ALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDT 151
A P + + KE+ + K
Sbjct: 808 KEVTPAQESAPPAEAKPKGEENEEKKEEPKLKREPPKAKPKLE 850
>gi|16759686|ref|NP_455303.1| cell envelope integrity inner membrane protein TolA [Salmonella
enterica subsp. enterica serovar Typhi str. CT18]
gi|29142541|ref|NP_805883.1| cell envelope integrity inner membrane protein TolA [Salmonella
enterica subsp. enterica serovar Typhi str. Ty2]
gi|213051766|ref|ZP_03344644.1| cell envelope integrity inner membrane protein TolA [Salmonella
enterica subsp. enterica serovar Typhi str. E00-7866]
gi|213649139|ref|ZP_03379192.1| cell envelope integrity inner membrane protein TolA [Salmonella
enterica subsp. enterica serovar Typhi str. J185]
gi|25512909|pir||AG0592 tolA protein [imported] - Salmonella enterica subsp. enterica
serovar Typhi (strain CT18)
gi|16501979|emb|CAD05209.1| tolA protein [Salmonella enterica subsp. enterica serovar Typhi]
gi|29138172|gb|AAO69743.1| tolA protein [Salmonella enterica subsp. enterica serovar Typhi
str. Ty2]
Length = 376
Score = 36.0 bits (81), Expect = 5.0, Method: Composition-based stats.
Identities = 14/116 (12%), Positives = 42/116 (36%), Gaps = 1/116 (0%)
Query: 2 RLENGLAISMILHVMFLLLLYF-NFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP 60
+L+ + IS +LH++ +L + +F+ + ++D + + + ++
Sbjct: 10 KLKRAIIISAVLHIILFAVLIWSSFDEHIEASAGGGGGSAIDAVMVDPGAVVQQYNRQQD 69
Query: 61 VVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALL 116
++E + Q + + + K +++ +Q E A
Sbjct: 70 QQASARGAEEERKKLQQQQAEELQQKQAAEQERLKQLEKERLAAQEQQKQAEEAAK 125
>gi|330815669|ref|YP_004359374.1| hypothetical protein bgla_1g07260 [Burkholderia gladioli BSR3]
gi|327368062|gb|AEA59418.1| hypothetical protein bgla_1g07260 [Burkholderia gladioli BSR3]
Length = 348
Score = 36.0 bits (81), Expect = 5.1, Method: Composition-based stats.
Identities = 18/134 (13%), Positives = 33/134 (24%), Gaps = 9/134 (6%)
Query: 137 DLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDF 196
D + + + S S S V+ RV
Sbjct: 224 DKERQARLAQLQGAAGGQGGSDGLAKSGTGSGSGGNATSPGYADKVKRRVKP---FIVWN 280
Query: 197 KRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPSTY 256
+ L + + + G VL V G E AV + +
Sbjct: 281 GATEGLVTSVDVRCSPSGDVLSVSVVRPSGN-----PAWDETVVGAVRAASPLP-PDTNG 334
Query: 257 KSWRNITLFFVPSK 270
+ + I + F ++
Sbjct: 335 ITPKKIAITFRAAE 348
>gi|83814980|ref|YP_444408.1| TonB, putative [Salinibacter ruber DSM 13855]
gi|83756374|gb|ABC44487.1| TonB, putative [Salinibacter ruber DSM 13855]
Length = 129
Score = 36.0 bits (81), Expect = 5.1, Method: Composition-based stats.
Identities = 20/93 (21%), Positives = 33/93 (35%), Gaps = 10/93 (10%)
Query: 183 RNRVIANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARK 241
R + P R + RV++ F + + G + D G +L A +
Sbjct: 40 RRALRGKTYYPPSALRAGLEGRVRVKFVVGKDGDIESPTIADGAGA------LLNRAALR 93
Query: 242 AVIK--SQAFRLSPSTYKSWRNITLFFV-PSKM 271
AV + R ++ R T+ F P KM
Sbjct: 94 AVRRLECTPGREQSRPVEAERTKTVVFALPEKM 126
>gi|157160757|ref|YP_001458075.1| transport protein TonB [Escherichia coli HS]
gi|188492099|ref|ZP_02999369.1| outer membrane receptor-mediated transport energizer protein TonB
[Escherichia coli 53638]
gi|194436979|ref|ZP_03069078.1| outer membrane receptor-mediated transport energizer protein TonB
[Escherichia coli 101-1]
gi|254161331|ref|YP_003044439.1| transport protein TonB [Escherichia coli B str. REL606]
gi|312971441|ref|ZP_07785616.1| protein tonB [Escherichia coli 1827-70]
gi|157066437|gb|ABV05692.1| outer membrane receptor-mediated transport energizer protein TonB
[Escherichia coli HS]
gi|188487298|gb|EDU62401.1| outer membrane receptor-mediated transport energizer protein TonB
[Escherichia coli 53638]
gi|194423962|gb|EDX39950.1| outer membrane receptor-mediated transport energizer protein TonB
[Escherichia coli 101-1]
gi|242377029|emb|CAQ31753.1| TonB protein; energy transducer; uptake of iron, cyanocobalimin;
sensitivity to phages, colicins, subunit of TonB energy
transducing system, vitamin B12 outer membrane transport
complex, vitamin B12 transport system, Outer Membrane
Ferric Enterobactin Transport System, Ferric
Enterobactin Transport System, Outer Membrane
Ferrichrome Transport System, ferrichrome uptake system,
Outer Membrane Ferric Citrate Transport System and
ferric dicitrate uptake system [Escherichia coli
BL21(DE3)]
gi|253973232|gb|ACT38903.1| membrane spanning protein in TonB-ExbB-ExbD complex [Escherichia
coli B str. REL606]
gi|253977446|gb|ACT43116.1| membrane spanning protein in TonB-ExbB-ExbD complex [Escherichia
coli BL21(DE3)]
gi|310336038|gb|EFQ01238.1| protein tonB [Escherichia coli 1827-70]
Length = 239
Score = 36.0 bits (81), Expect = 5.1, Method: Composition-based stats.
Identities = 18/225 (8%), Positives = 51/225 (22%), Gaps = 20/225 (8%)
Query: 8 AISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGS 67
+S+ +H + L + Q++ + + +SV + D + + V
Sbjct: 14 LLSVCIHGAVVAGLLYTSVHQVIELPAPAQPISVTMVTPADLEPPQAVQPPPEPVVEPEP 73
Query: 68 SQ--------------ENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKES 113
E + + + + R +S A
Sbjct: 74 EPEPIPEPPKEAPVVIEKPKPKPKPKPKPVKKVQEQPKRDVKPVESRPASPFENTAPARP 133
Query: 114 ALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRI 173
+ + + + + + + K ++ + +I
Sbjct: 134 TSSTATAATSKPVTSVASGPRALSRNQPQYPARAQALRIEGQVKVKFDVTPDGRVDNVQI 193
Query: 174 PSQDAIAIVRNRVI---ANWNIPSDFKRFKKLRVKMHFQLNQKGF 215
S + V W + ++ G
Sbjct: 194 LSAKPANMFEREVKNAMRRWRYEPGKPGSG---IVVNILFKINGT 235
>gi|71018309|ref|XP_759385.1| hypothetical protein UM03238.1 [Ustilago maydis 521]
gi|46099110|gb|EAK84343.1| hypothetical protein UM03238.1 [Ustilago maydis 521]
Length = 1121
Score = 36.0 bits (81), Expect = 5.1, Method: Composition-based stats.
Identities = 22/202 (10%), Positives = 53/202 (26%), Gaps = 6/202 (2%)
Query: 49 YHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQ 108
+ + E + K + L + + + + + + + K E+
Sbjct: 756 KAEEEARIKAEEETRLKAEEEARLKAEEEARLKAEEEARLKAEEEARLKAEEEARLKAEE 815
Query: 109 ALKESALLRMPVSPYDKQKISKATN-KEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEK 167
+ R+ ++ K + K + + E ++T K E +KV
Sbjct: 816 EAEAKEAARLKAEEEERLKADEMERLKAEAKSATAKDEAARVETAEEARIKAEEEAKVAA 875
Query: 168 SSRKRIPSQDAI-AIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKIN---VD 223
+ I + + + + + + + D
Sbjct: 876 QEEAKGLKAKVILDEGAGTIAEDETRSKAVQDAQSVEIGPNIPFV-DAETQAAPLKKKDD 934
Query: 224 VVGGTELVRRMLRENARKAVIK 245
G V E A K V +
Sbjct: 935 ENSGNSSVAEAATEAAPKTVEQ 956
>gi|259418148|ref|ZP_05742067.1| hypothetical protein SCH4B_2436 [Silicibacter sp. TrichCH4B]
gi|259347054|gb|EEW58868.1| hypothetical protein SCH4B_2436 [Silicibacter sp. TrichCH4B]
Length = 445
Score = 36.0 bits (81), Expect = 5.1, Method: Composition-based stats.
Identities = 20/167 (11%), Positives = 38/167 (22%), Gaps = 5/167 (2%)
Query: 10 SMILHVMFLLLLYFNFNVQLLVP--ISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGS 67
S++ HV LL + L P + SV + + + E +
Sbjct: 21 SLVTHVAVGALLLGGLHPFLTGPGVAPDQPRYSVTLQPLDSDTLAGLELREGMAGAEAVT 80
Query: 68 S---QENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYD 124
E L E + + A + + + P
Sbjct: 81 ESSTPEQLAALEGEAERLSPEESEMEKLAALTPAPTEALPVEALPPVIADPVSPEAEPSA 140
Query: 125 KQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRK 171
+ + L + DT + P+ L
Sbjct: 141 TDATTLPPEEVPTLPTAPLSPLIPEDTSPLIPETVTALPSSTGDQVA 187
>gi|310821339|ref|YP_003953697.1| hypothetical protein STAUR_4086 [Stigmatella aurantiaca DW4/3-1]
gi|309394411|gb|ADO71870.1| conserved uncharacterized protein [Stigmatella aurantiaca DW4/3-1]
Length = 749
Score = 36.0 bits (81), Expect = 5.2, Method: Composition-based stats.
Identities = 28/187 (14%), Positives = 73/187 (39%), Gaps = 3/187 (1%)
Query: 37 EMLSVDNIYNEDYHSSKYKKIEEPVVQFKGS--SQENLVRDFSVQENGDRFSDQTKTHAT 94
E+ +V N+ ++ S+ I + V+ + + E + + ++ + S Q + A
Sbjct: 205 ELTTVQNVSTNEFKQSERMAITKRNVESDEAIFALERQRAEAAAKQKREIESIQAREVAE 264
Query: 95 ENETKRSSSSKGEQALKESALLRMPVSPYDKQKIS-KATNKEQDLQGISFAEKKSIDTVV 153
+ K +K E A ++ ++I N+E+ + + +K
Sbjct: 265 ADRVKAEEHAKAELARIKAEEEISINEENKSRQIQVAQKNRERVVGVETERVEKDRALEA 324
Query: 154 VRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQK 213
+ +++ L ++ K + ++R R++ + + +R K LRV + N+
Sbjct: 325 INRERETELQRIAKEKALEGEKKAIADVIRARIVVEKTVAEEEERIKDLRVTAEAKRNKD 384
Query: 214 GFVLGKI 220
++
Sbjct: 385 ALLINAE 391
>gi|188996673|ref|YP_001930924.1| TonB family protein [Sulfurihydrogenibium sp. YO3AOP1]
gi|188931740|gb|ACD66370.1| TonB family protein [Sulfurihydrogenibium sp. YO3AOP1]
Length = 251
Score = 36.0 bits (81), Expect = 5.2, Method: Composition-based stats.
Identities = 24/227 (10%), Positives = 60/227 (26%), Gaps = 21/227 (9%)
Query: 4 ENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLS-VDNIYNEDYHSSKYKKIEEPVV 62
S++ + Y FN++L P + V+ + + ++ +
Sbjct: 9 SASFIFSLLFSSLSAYGTYLIFNIKLHEPPKPTTFIEIVELPEEKQEIKKLEQPKKQIIK 68
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
+ K + + +Q ++ ++ P
Sbjct: 69 EVKKE-------------------THKPKQQPKQQIIEHKKPIEKQKIEVKQEVKTEDKP 109
Query: 123 YDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIV 182
+ K N ++ E K ++ + A V
Sbjct: 110 VEPIKEESKHNFKKQEIVEKPPEIKKPQPPPPPKHEESPSPPPLPKEPDKSALNQYYATV 169
Query: 183 RNRVIANWNIPSDF-KRFKKLRVKMHFQLNQKGFVLGKINVDVVGGT 228
R + + P + +R ++ V + F +++ G V V
Sbjct: 170 RKIIESKKRYPEEAKRREEEGAVLVRFTIDEDGNVKDVSLVRSSDSN 216
>gi|299066430|emb|CBJ37615.1| TonB protein [Ralstonia solanacearum CMR15]
Length = 239
Score = 36.0 bits (81), Expect = 5.3, Method: Composition-based stats.
Identities = 25/228 (10%), Positives = 58/228 (25%), Gaps = 23/228 (10%)
Query: 23 FNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENG 82
F+F ++ P + + ++ V ++ + I P+ Q E
Sbjct: 15 FDFPPLMIHPRTLKILVVVLLMHVGVLTLIQLGLIASPLRQEP------------PPELQ 62
Query: 83 DRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGIS 142
T K+ +++ P + A +
Sbjct: 63 VNIIPDTPPQPVRQPEPPKPQPAKPAPPKQVNIVKPVPQPKPAPTPAPALPPSDTAPVVP 122
Query: 143 FAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKL 202
A V + + + +V K ++
Sbjct: 123 AAPPAPPAPPVEAAPAPAPVQSGPINVGINDIQCNNPPLV--------YPTMSQKMGEEG 174
Query: 203 RVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFR 250
R + + +G V+ V G+ + R E+AR + ++
Sbjct: 175 RTLVKITIGPEGDVVNA-VVATPSGSTRLDRAALESARS--LHCSPYK 219
>gi|291617630|ref|YP_003520372.1| TonB [Pantoea ananatis LMG 20103]
gi|291152660|gb|ADD77244.1| TonB [Pantoea ananatis LMG 20103]
gi|327394058|dbj|BAK11480.1| protein TonB [Pantoea ananatis AJ13355]
Length = 252
Score = 36.0 bits (81), Expect = 5.3, Method: Composition-based stats.
Identities = 23/221 (10%), Positives = 51/221 (23%), Gaps = 24/221 (10%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPV 61
R + +S+ LH + + + Q + + +SV + +
Sbjct: 11 RTPVAMILSVALHGAVIAGVLYASFHQTIELPKASQPISVTMVAPAVQPEPAIAQPAPQP 70
Query: 62 VQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVS 121
+ + + + K K EQ +E +
Sbjct: 71 TPQPEPEPVPEPQPAPEPPKAEPVPIPKPEPKPKPKPKPRHEPKREQPKREVKPRQDVKP 130
Query: 122 PYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAI 181
+ A + + + V K +SK R
Sbjct: 131 QANPFSHDTAATQSKPATAPKSTPSAAPTQSVSSGPKALNISKPSYPPRAAALRV----- 185
Query: 182 VRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINV 222
+ RV++ F ++ G V +
Sbjct: 186 -------------------EGRVRVKFDVDSDGRVDNIEIL 207
>gi|325982384|ref|YP_004294786.1| TonB family protein [Nitrosomonas sp. AL212]
gi|325531903|gb|ADZ26624.1| TonB family protein [Nitrosomonas sp. AL212]
Length = 237
Score = 36.0 bits (81), Expect = 5.3, Method: Composition-based stats.
Identities = 15/119 (12%), Positives = 38/119 (31%), Gaps = 3/119 (2%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
GL +++H YF +N +L+ + L + I ++ E V+ +
Sbjct: 23 GLLFVLVVHAALF---YFLWNQRLIPTPDQAVTLFAELIAPSIPRAAPEALPEPVPVKLQ 79
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYD 124
+ + + + + + E ++ +Q K +L +
Sbjct: 80 PAKKPVVKPKQERLVAKAPVIPKQEYIESAPEPSPVTAPVPDQMEKSGSLPDPAPAQMP 138
>gi|289618689|emb|CBI54755.1| unnamed protein product [Sordaria macrospora]
Length = 1070
Score = 36.0 bits (81), Expect = 5.3, Method: Composition-based stats.
Identities = 12/168 (7%), Positives = 43/168 (25%), Gaps = 1/168 (0%)
Query: 47 EDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHAT-ENETKRSSSSK 105
E+ + + ++ + +E+ + + + A + + +
Sbjct: 130 EEKAEKRRRGNKKKSKRVSDHKEESAQASQKPKPSPAPEPKKDAKSAAGQKRKTTEPAPE 189
Query: 106 GEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKV 165
E K + P P K + + + + K
Sbjct: 190 KEPKQKVRKVTETPAPPLPSYKAPDDIAGKISELPELRQGAAKLLSKSLAHSIGVAEKKG 249
Query: 166 EKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQK 213
+ + + ++ + + S + + + ++NQ
Sbjct: 250 VSVPSEGVSATAEKLAIQIERAVHDSHQSTAYSGQMRTLSYNIKINQD 297
>gi|317178368|dbj|BAJ56156.1| siderophore-mediated iron transport protein [Helicobacter pylori
F30]
Length = 285
Score = 36.0 bits (81), Expect = 5.4, Method: Composition-based stats.
Identities = 30/259 (11%), Positives = 73/259 (28%), Gaps = 17/259 (6%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEE------ 59
IS L+ + YF + P+++ V +S K E
Sbjct: 18 SFLISFALYA--IGFGYFLLREEAPTPLAQAGTTKVTMSLASINTNSNTKTNAESAKPKE 75
Query: 60 ---PVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALL 116
+ + +E ++ S + + + K + + E
Sbjct: 76 EPKEKPKKEEPKKEKPKKEVSKPKPKPKPKPKPKPEPKPKPEPKPKPDPKPEPKVEEVKK 135
Query: 117 RMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQ 176
P K++ + ++ + ++ + +K + E + S
Sbjct: 136 EEPKEEPKKEEAKEKAKEKSAPKQVTTKDIVKEKDKQEESNKTSEGATSEAQAYNPGVSN 195
Query: 177 DAIAIVRNRVIANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRML 235
+ + ++ + + P + + V + F +N G V V +L
Sbjct: 196 EFLMKIQTAISSKNRYPKMAQIRGIEGEVLVSFVINPDGSVTDIKVVKSNTTD-----IL 250
Query: 236 RENARKAVIKSQAFRLSPS 254
A +A+ + P
Sbjct: 251 NHAALEAIKNAAYLFPKPE 269
>gi|198462709|ref|XP_002135356.1| GA28377 [Drosophila pseudoobscura pseudoobscura]
gi|198150945|gb|EDY73983.1| GA28377 [Drosophila pseudoobscura pseudoobscura]
Length = 1648
Score = 36.0 bits (81), Expect = 5.4, Method: Composition-based stats.
Identities = 8/72 (11%), Positives = 21/72 (29%), Gaps = 2/72 (2%)
Query: 53 KYKKIEEPVVQFKGSSQENLV--RDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQAL 110
+ ++ PV + + + + + A ET K E+
Sbjct: 248 PTEPVKAPVEELPVEVEPQPEVLPEAIDEPKPEPEIVVRVDEAEPVETPLEPEVKVEEVT 307
Query: 111 KESALLRMPVSP 122
+ + ++ P
Sbjct: 308 EINVVVEPTKDP 319
>gi|194883846|ref|XP_001976008.1| GG20232 [Drosophila erecta]
gi|190659195|gb|EDV56408.1| GG20232 [Drosophila erecta]
Length = 1641
Score = 36.0 bits (81), Expect = 5.4, Method: Composition-based stats.
Identities = 16/155 (10%), Positives = 42/155 (27%), Gaps = 1/155 (0%)
Query: 35 RREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHAT 94
+L V+ + ++ + K +++ N ++ +
Sbjct: 1158 LASLLEVE-VNEGASEPKPVSPGQKKQPRKKTTNKPNPALLQLERQRMEDMKKSDAKLKM 1216
Query: 95 ENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVV 154
+ K + + ++ +K +N Q S + +
Sbjct: 1217 KVMVKLKRAEDEFEVARKWVEECRKREQELATNDAKPSNVTQTPVSESQKISEKGSSPKK 1276
Query: 155 RPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIAN 189
K+ EKS K A ++ ++ N
Sbjct: 1277 ESTKEHGEVDKEKSKNKETIGDILKAAIKAKIGEN 1311
>gi|87311431|ref|ZP_01093551.1| squalene-hopene cyclase-like protein [Blastopirellula marina DSM
3645]
gi|87285843|gb|EAQ77757.1| squalene-hopene cyclase-like protein [Blastopirellula marina DSM
3645]
Length = 713
Score = 36.0 bits (81), Expect = 5.4, Method: Composition-based stats.
Identities = 9/133 (6%), Positives = 35/133 (26%), Gaps = 2/133 (1%)
Query: 3 LENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNE-DYHSSKYKKIEEPV 61
L + +S+ H++ + + + P +S + + + + +
Sbjct: 46 LSKCVVLSIFAHLLLIAYAHMT-QLFAPGPARAPAPVSFKLSNVAFEEKADRPTQQAQQA 104
Query: 62 VQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVS 121
++ S +L + + + + + A ++
Sbjct: 105 KPWEVSPTASLPAPQAAPLARREDPNAAVSDPAHDWPSEDAPLSQTVTPPLDAAEEAELT 164
Query: 122 PYDKQKISKATNK 134
+ I +
Sbjct: 165 EPNAAPIEPSIAP 177
>gi|217033657|ref|ZP_03439085.1| hypothetical protein HP9810_899g93 [Helicobacter pylori 98-10]
gi|216944003|gb|EEC23437.1| hypothetical protein HP9810_899g93 [Helicobacter pylori 98-10]
Length = 285
Score = 36.0 bits (81), Expect = 5.4, Method: Composition-based stats.
Identities = 24/257 (9%), Positives = 65/257 (25%), Gaps = 13/257 (5%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
IS +L+ + V + + +++ ++K +
Sbjct: 18 SFLISFVLYAIGFGYFLLREEVPTPLAQAGTTKVTMSLASINTNSNTKTNAESAKPKEEP 77
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
+ + + + K K E + ++ ++
Sbjct: 78 KEKPKKEEPKKEEPKKEVSKPKPKPKPKPKPKPKPEPKPKPEPKPEPKPEPKVEEVKKEE 137
Query: 126 QKISKATNKEQDLQGISFAEKK-------SIDTVVVRPDKKELLSKVEKSSRKRIPSQDA 178
K + ++ K+ +K + E + S +
Sbjct: 138 PKEEPKKEEAKEEAKEKSTPKQVTTKDIVKEKDKQEESNKTSEGATSEAQAYNPGVSNEF 197
Query: 179 IAIVRNRVIANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRE 237
+ ++ + + P + + V + F +N G V V +L
Sbjct: 198 LMKIQTAISSKNRYPKMAQIRGIEGEVLVSFVINPDGSVTDIKVVKSNTTD-----ILNH 252
Query: 238 NARKAVIKSQAFRLSPS 254
A +A+ + P
Sbjct: 253 AALEAIKNAAHLFPKPE 269
>gi|152998695|ref|YP_001364376.1| peptidase M14 carboxypeptidase A [Shewanella baltica OS185]
gi|151363313|gb|ABS06313.1| peptidase M14 carboxypeptidase A [Shewanella baltica OS185]
Length = 683
Score = 36.0 bits (81), Expect = 5.4, Method: Composition-based stats.
Identities = 15/99 (15%), Positives = 32/99 (32%)
Query: 22 YFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQEN 81
F+ +V + +S + SVD + NE +K + + + V D + E
Sbjct: 3 LFSLSVIAIACLSAGSLYSVDAVANEAKTLAKTAQASTDLPTSTPVAAAQTVTDKTPAET 62
Query: 82 GDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPV 120
A T+ +++ + +P
Sbjct: 63 PATAPQDVSPAANTQATEPAATVATDATTVAPEPAPIPE 101
>gi|284921061|emb|CBG34126.1| TonB protein [Escherichia coli 042]
Length = 239
Score = 36.0 bits (81), Expect = 5.4, Method: Composition-based stats.
Identities = 18/225 (8%), Positives = 50/225 (22%), Gaps = 20/225 (8%)
Query: 8 AISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGS 67
+S+ +H + L + Q++ + + +SV + D + + V
Sbjct: 14 LLSVCIHGAVVAGLLYTSVHQVIELPAPAQPISVTMVAPADLEPPQAVQPPPEPVVEAEP 73
Query: 68 SQ--------------ENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKES 113
E + + + + R +S A
Sbjct: 74 EPEPIPEPPKEAPVVIEKPKPKPKPKPKPVKKVQEQPKRDVKPVESRPASPFENTAPARP 133
Query: 114 ALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRI 173
+ + + + + + + K ++ +I
Sbjct: 134 TSSTATAATSKPVTSVASGPRALSRNQPQYPARAQALRIEGQVKVKFDVTPDGHVDNVQI 193
Query: 174 PSQDAIAIVRNRVI---ANWNIPSDFKRFKKLRVKMHFQLNQKGF 215
S + V W + ++ G
Sbjct: 194 LSAKPANMFEREVKNAMRRWRYEPGKPGSG---IVVNILFKINGT 235
>gi|300928028|ref|ZP_07143580.1| opacity-associated protein A [Escherichia coli MS 187-1]
gi|300463930|gb|EFK27423.1| opacity-associated protein A [Escherichia coli MS 187-1]
Length = 224
Score = 36.0 bits (81), Expect = 5.6, Method: Composition-based stats.
Identities = 17/171 (9%), Positives = 35/171 (20%), Gaps = 7/171 (4%)
Query: 72 LVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKA 131
L D + Q + + PV+P Q+
Sbjct: 60 LPSDDTPNAPVVTREAQLDIQSQSQPPTEEQLRAQLVTPQNDPDQVAPVAPEPIQEGQPE 119
Query: 132 TNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWN 191
+ + + + + +V
Sbjct: 120 EQPQTTQTQPFQPDSGIDNQWRSYRVEPGKTMAQLFRDHGLPATDVYA---MAQVEGAGK 176
Query: 192 IPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKA 242
S+ + + + + N G V G L R L + +A
Sbjct: 177 PLSNLQNGQ----MVKIRQNASGVVTGLTIDTGNNQQVLFTRQLDGSFIRA 223
>gi|260461627|ref|ZP_05809874.1| conserved hypothetical protein [Mesorhizobium opportunistum
WSM2075]
gi|259032697|gb|EEW33961.1| conserved hypothetical protein [Mesorhizobium opportunistum
WSM2075]
Length = 377
Score = 36.0 bits (81), Expect = 5.6, Method: Composition-based stats.
Identities = 17/185 (9%), Positives = 49/185 (26%), Gaps = 15/185 (8%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFK 65
L S+ILH + L+F P + + ++V + + K K
Sbjct: 15 ALVASLILHALIAGFLFFGLPRSEQQPDQQEQPVNVAIVPPPETPKPKPAPKPPEPKPEK 74
Query: 66 GSSQENLVRDFSVQE---------------NGDRFSDQTKTHATENETKRSSSSKGEQAL 110
+ + + D +++ ++ S +
Sbjct: 75 KAEKPPEQKPPPEPPKPPNDEVLKRVFQYGQKDTGPEKSLDGSSAKPNTPSPAKDEAAKP 134
Query: 111 KESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSR 170
+ PV Q+ ++ + ++ ++ E+ + + +
Sbjct: 135 PVAPAPTQPVPAATPQQKAEPSKPDEKPATVAPVERPAQSEEKQAAEDTDKQPPEVAPQP 194
Query: 171 KRIPS 175
+
Sbjct: 195 AEKQA 199
>gi|297715048|ref|XP_002833912.1| PREDICTED: hypothetical protein LOC100457949, partial [Pongo
abelii]
Length = 667
Score = 36.0 bits (81), Expect = 5.6, Method: Composition-based stats.
Identities = 23/184 (12%), Positives = 58/184 (31%)
Query: 29 LLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQ 88
+ +M + E ++ + + K QE +R+ + +
Sbjct: 396 EKIREQEEKMWRQEEKIWEQEKKMWRQEEKIREQEEKMGRQEEKIREQEEKMHEQEEKMW 455
Query: 89 TKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKS 148
+ + K K ++ ++ + +K K +EQ+ + EK
Sbjct: 456 RQEEKMHEQEKIREEEKRQEQEEKIWRQEEKIREQEKMWRQKEKMREQEEKIREQEEKMW 515
Query: 149 IDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHF 208
VR K + + EK + Q+ +R + W + ++ ++
Sbjct: 516 RQEEKVRKQKDMMREQEEKIREQEEMMQEQEEKMRRQEEKMWEQEVRLRHQEEKMQELEV 575
Query: 209 QLNQ 212
+L +
Sbjct: 576 RLQE 579
>gi|293364292|ref|ZP_06611018.1| alkaline amylopullulanase [Streptococcus oralis ATCC 35037]
gi|307702742|ref|ZP_07639694.1| pullulanase [Streptococcus oralis ATCC 35037]
gi|291317138|gb|EFE57565.1| alkaline amylopullulanase [Streptococcus oralis ATCC 35037]
gi|307623858|gb|EFO02843.1| pullulanase [Streptococcus oralis ATCC 35037]
Length = 1238
Score = 36.0 bits (81), Expect = 5.6, Method: Composition-based stats.
Identities = 17/142 (11%), Positives = 44/142 (30%), Gaps = 4/142 (2%)
Query: 10 SMILHVMFLLLLYF--NFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGS 67
S+++ +LL + +P ++ +V E S + E P+ + K +
Sbjct: 25 SVLIGASIILLSAAMPTISANENLPQTQENTSAVTKAPTETETSQT--QKETPISEQKNA 82
Query: 68 SQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQK 127
+ + + + KT S K + + + P + ++
Sbjct: 83 NASLDSKKEAPAGETTTAPETPKTEDATTSQANSKEEKVDNSTATPTSEQKPQADTSSEE 142
Query: 128 ISKATNKEQDLQGISFAEKKSI 149
+ ++ + K S
Sbjct: 143 PIADNHFRIHVKKLPEENKDSQ 164
>gi|253997633|ref|YP_003049697.1| hypothetical protein Mmol_2268 [Methylotenera mobilis JLW8]
gi|253984312|gb|ACT49170.1| hypothetical protein Mmol_2268 [Methylotenera mobilis JLW8]
Length = 362
Score = 36.0 bits (81), Expect = 5.6, Method: Composition-based stats.
Identities = 18/185 (9%), Positives = 42/185 (22%), Gaps = 8/185 (4%)
Query: 5 NGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQF 64
+ +S++LH +FL F + ++ L+V + +
Sbjct: 17 AAVMVSLLLHTLFLSEFSFTLP----EITNNQQQLNVRLTP----TPAPVMVKKILEKSA 68
Query: 65 KGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYD 124
Q+ + T T + + A
Sbjct: 69 SKPKQKKPENSNTESSKPTDSISTTPTEDKVYLPATDDAPVPPVNTEPEAASLDDAVMPS 128
Query: 125 KQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRN 184
+ +S+ Q I + + ++ + I S +
Sbjct: 129 EPSMSETEVAVTPPQYIETEFEVFQGDSKSAVGNARITFNIDMAGSYAIKSTIEAQGLTA 188
Query: 185 RVIAN 189
N
Sbjct: 189 LFFQN 193
>gi|91775083|ref|YP_544839.1| hypothetical protein Mfla_0730 [Methylobacillus flagellatus KT]
gi|91709070|gb|ABE48998.1| hypothetical protein Mfla_0730 [Methylobacillus flagellatus KT]
Length = 351
Score = 36.0 bits (81), Expect = 5.6, Method: Composition-based stats.
Identities = 18/176 (10%), Positives = 45/176 (25%), Gaps = 6/176 (3%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISR----REMLSVDNIYNEDYHSSKYKKIEEPV 61
L S+ILH +L F S ++ L V + +
Sbjct: 53 ALIFSLILH--LILFFGFIMPTMDQGEESEKDGGQKELVVSLAQPDKKPQPEMAPPPAAT 110
Query: 62 VQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVS 121
+S+ + + + E K + + + A +
Sbjct: 111 PPPPPASKPTPQQPRRQSKPAPPVVTGKSKPLPQPEQKPAPRPEPQPAPTPAPPRPQEPD 170
Query: 122 PYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQD 177
P +S ++ + + ++ + S ++ R ++
Sbjct: 171 PSQYSDMSSYMAAMREYRRATDNNYAAMMENQRAQRESGNRSLSDEEKRDETIKKN 226
>gi|332760893|gb|EGJ91181.1| protein TolA [Shigella flexneri 4343-70]
Length = 358
Score = 36.0 bits (81), Expect = 5.7, Method: Composition-based stats.
Identities = 15/122 (12%), Positives = 46/122 (37%), Gaps = 3/122 (2%)
Query: 2 RLENGLAISMILHVMFLLLLYF-NFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP 60
+L+ + IS +LHV+ L + +F+ + S+D + + + K +
Sbjct: 10 KLKRAIIISAVLHVILFAALIWSSFDENIEASAGGGGGSSIDAVMVDSGAVVEQYKRMQS 69
Query: 61 VVQFKGS--SQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRM 118
Q + + +E ++ + + + + + ++ + +QA + + +
Sbjct: 70 QESSAKRSDEQRKMKEQQAAEELREKQAAEQERLKQLEKERLAAQEQKKQAEEAAKQAEL 129
Query: 119 PV 120
Sbjct: 130 KQ 131
>gi|323977179|gb|EGB72266.1| TonB family protein domain-containing protein [Escherichia coli
TW10509]
Length = 244
Score = 36.0 bits (81), Expect = 5.7, Method: Composition-based stats.
Identities = 18/225 (8%), Positives = 51/225 (22%), Gaps = 20/225 (8%)
Query: 8 AISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGS 67
+S+ +H + L + Q++ + + +SV + D + + V
Sbjct: 19 LLSVCIHGAVVAGLLYTSVHQVIELPAPAQPISVTMVAPADLEPPQAVQPPPEPVVEPEP 78
Query: 68 SQ--------------ENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKES 113
E + + + + R +S A
Sbjct: 79 EPEPIPEPPKEAPVVIEKPKPKPKPKPKPVKKVQEQPKRDVKPVESRPASPFENTAPARP 138
Query: 114 ALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRI 173
+ + + + + + + K ++ + +I
Sbjct: 139 TSSTATAATSKPVTSVASGPRALSRNQPQYPARAQALRIEGQVKVKFDVTPDGRVDNVQI 198
Query: 174 PSQDAIAIVRNRVI---ANWNIPSDFKRFKKLRVKMHFQLNQKGF 215
S + V W + ++ G
Sbjct: 199 LSAKPANMFEREVKNAMRRWRYEPGKPGSG---IVVNILFKINGT 240
>gi|270263784|ref|ZP_06192053.1| cell envelope integrity inner membrane protein TolA [Serratia
odorifera 4Rx13]
gi|270042668|gb|EFA15763.1| cell envelope integrity inner membrane protein TolA [Serratia
odorifera 4Rx13]
Length = 445
Score = 36.0 bits (81), Expect = 5.7, Method: Composition-based stats.
Identities = 17/166 (10%), Positives = 56/166 (33%), Gaps = 3/166 (1%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPV 61
+L + +S++LH + + LL + L ++ + E
Sbjct: 10 KLNRAVIVSVVLHFILIALLIWG---SLQENVNMDSAGGGGEGSVVGAVMVDPGAVVEQY 66
Query: 62 VQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVS 121
+ + S + + Q+ ++ +++ + + + K +E A
Sbjct: 67 NRQQQQSNDAQRAEKQRQKKAEQQAEELQQKQAAEQQRLKELEKERLTAQEKAAQDAKEQ 126
Query: 122 PYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEK 167
+++ ++ + + Q + ++K +K +K ++
Sbjct: 127 AEQQKQAAEQQKQAAEQQKQAAEQQKQAAEQQKVTEKAAEKAKEQQ 172
>gi|73968426|ref|XP_849043.1| PREDICTED: similar to Bromodomain adjacent to zinc finger domain 2A
(Transcription termination factor-I interacting protein
5) (TTF-I interacting protein 5) (Tip5) (hWALp3) isoform
2 [Canis familiaris]
Length = 1659
Score = 36.0 bits (81), Expect = 5.7, Method: Composition-based stats.
Identities = 25/182 (13%), Positives = 51/182 (28%), Gaps = 8/182 (4%)
Query: 27 VQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENG-DRF 85
P+++ I S P + S +L V
Sbjct: 154 SDFSPPLTQPTSDQSSTIQLHPATSPAVPPTASPAISLAVSPAASLEISPEVSPAVSPAV 213
Query: 86 SDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAE 145
S + + S + S+ + + SP K+S A + L S A+
Sbjct: 214 SPEISPVISPAAFPTVSPTSSAALPPVSSEVSLTASPVTSPKVSPAASPVAVLPAASPAD 273
Query: 146 KKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVK 205
K D +E+ + +S ++R R+ + + + V+
Sbjct: 274 KDVSTFPETTTDLEEITGEGITTSGSG-------DVLRRRIATPEEVRLPLQHGWRREVR 326
Query: 206 MH 207
+
Sbjct: 327 IK 328
>gi|326792011|ref|YP_004309832.1| hypothetical protein Clole_2937 [Clostridium lentocellum DSM 5427]
gi|326542775|gb|ADZ84634.1| hypothetical protein Clole_2937 [Clostridium lentocellum DSM 5427]
Length = 356
Score = 36.0 bits (81), Expect = 5.8, Method: Composition-based stats.
Identities = 22/181 (12%), Positives = 64/181 (35%), Gaps = 1/181 (0%)
Query: 1 MRLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP 60
M+L G+ +++L + L+ + ++ ++D +Y +
Sbjct: 1 MKLNKGIKKALLLLSVTSLITTSVLAAPVTEKKELDLDYAITMAISKDETLGEYARNTAV 60
Query: 61 VVQFKGSSQENLVRDFSVQENGDRFSDQTKT-HATENETKRSSSSKGEQALKESALLRMP 119
+ K S + ++S ++ +Q K + + + L+ + L
Sbjct: 61 YTEQKKSIENIGSVEYSSKKIAIEELNQKKQFQKDRITKEVTEQYQNIVLLQRNIELLKK 120
Query: 120 VSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAI 179
++ ++ + T K++ ++++ ++ KKE K ++K + I
Sbjct: 121 QINLNENQVKQVTIKKEKGFCDELTYEQAVQSLEESKVKKEQTEKNLGDAKKSFLNLTNI 180
Query: 180 A 180
Sbjct: 181 N 181
>gi|238495903|ref|XP_002379187.1| chitin synthase activator (Chs3), putative [Aspergillus flavus
NRRL3357]
gi|220694067|gb|EED50411.1| chitin synthase activator (Chs3), putative [Aspergillus flavus
NRRL3357]
Length = 963
Score = 36.0 bits (81), Expect = 5.8, Method: Composition-based stats.
Identities = 14/129 (10%), Positives = 27/129 (20%)
Query: 29 LLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQ 88
P +M VD N D Q + + + Q
Sbjct: 453 EAPPPVMNQMDPVDPEQNPDALPHHPAPFRPGHDQGNKPAPVRQYNSATDSAPPPVVAQQ 512
Query: 89 TKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKS 148
+ Q + +S QK+++A+ + + K
Sbjct: 513 GPPVDPPAGPVTQEELQQLQRVAKSNPSDKKTQLLLAQKLAEASVVLVESSRLDPKSKAK 572
Query: 149 IDTVVVRPD 157
Sbjct: 573 AREKYAMDA 581
>gi|331656757|ref|ZP_08357719.1| protein TolA [Escherichia coli TA206]
gi|331055005|gb|EGI27014.1| protein TolA [Escherichia coli TA206]
Length = 366
Score = 36.0 bits (81), Expect = 5.8, Method: Composition-based stats.
Identities = 15/119 (12%), Positives = 45/119 (37%), Gaps = 3/119 (2%)
Query: 2 RLENGLAISMILHVMFLLLLYF-NFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP 60
+L+ + IS +LHV+ L + +F+ + S+D + + + K +
Sbjct: 10 KLKRAIIISAVLHVILFAALIWSSFDENIEASAGGGGGSSIDAVMVDSGAVVEQYKRMQS 69
Query: 61 VVQFKGS--SQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLR 117
Q + + +E ++ + + + + + ++ + +QA + +
Sbjct: 70 QESSAKRSDEQRKMKEQQAAEELREKQAAEQERLKQLEKERLAAQEQKKQAEEAAKQAE 128
>gi|117617662|ref|YP_858095.1| protein TolA [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
gi|117559069|gb|ABK36017.1| protein TolA [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
Length = 387
Score = 36.0 bits (81), Expect = 5.9, Method: Composition-based stats.
Identities = 16/140 (11%), Positives = 45/140 (32%), Gaps = 12/140 (8%)
Query: 132 TNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWN 191
+++ + +K+ D + + + S+ + A+++ V
Sbjct: 257 AERKRKAAEEAKLQKEMEDMMQQQLAAEANARSQAASAAAQGEVDKYAALIKATVERYMI 316
Query: 192 IPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRL 251
+ + + +L GFV+ + + + AV+K+ +
Sbjct: 317 LDPTMRGK---TCTIGVRLASTGFVISV-------DNGQGDPAVCRSGKAAVLKANQLPV 366
Query: 252 S--PSTYKSWRNITLFFVPS 269
P+ ++ + L PS
Sbjct: 367 PKDPAAFEMLKEFNLKLEPS 386
>gi|330443986|ref|YP_004376972.1| hypothetical protein G5S_0257 [Chlamydophila pecorum E58]
gi|328807096|gb|AEB41269.1| conserved hypothetical protein [Chlamydophila pecorum E58]
Length = 242
Score = 36.0 bits (81), Expect = 5.9, Method: Composition-based stats.
Identities = 24/225 (10%), Positives = 58/225 (25%), Gaps = 35/225 (15%)
Query: 7 LAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQF-K 65
L S+ LH LL + + ++ S +E V
Sbjct: 16 LLFSLFLHTAILLGVCIS--------------------PHQPKQSQSKVPFKEKFVAPLP 55
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
S+ + Q A + + K +A + + P P
Sbjct: 56 SSTSPQTISTHISQPILQPQPPSQYKLAPKPKPKTQKIQHKPKAPPKPKVQTSPQKPSSF 115
Query: 126 QKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNR 185
+++ + L + S++T + + +S + +++
Sbjct: 116 EQLHALAQLAETLSQRIEKTESSLETFSLCTPSQLTMSSSLEETQENEL----------- 164
Query: 186 VIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTEL 230
V++ L+ G + I + + +
Sbjct: 165 ---CEVFRKYLTLPSPGEVRIKITLSPSGSIEECIFLSPISPADK 206
>gi|170768253|ref|ZP_02902706.1| protein TonB [Escherichia albertii TW07627]
gi|170123019|gb|EDS91950.1| protein TonB [Escherichia albertii TW07627]
Length = 238
Score = 36.0 bits (81), Expect = 5.9, Method: Composition-based stats.
Identities = 17/220 (7%), Positives = 50/220 (22%), Gaps = 12/220 (5%)
Query: 8 AISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGS 67
+S+ +H + L + Q++ + + +SV + D + + V
Sbjct: 15 LLSVCIHGAVVAGLLYTSVHQVIELPAPAQPISVTMVAPADLEPPQAVQPPPEPVVEPEP 74
Query: 68 SQ------------ENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESAL 115
E + + + + R +S A
Sbjct: 75 EPIPEPPKEAPVVIEKPKPKPKPKPKPVKKVQEQPKRDAKPAESRPASPFESTAPARPTS 134
Query: 116 LRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPS 175
+ + + + + + + K ++ + +I S
Sbjct: 135 STATAATSKPVTSVASGPRALSRNQPLYPPRAQALRIEGQVKVKFDVTPDGRVDNVQILS 194
Query: 176 QDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGF 215
+ V + ++ G
Sbjct: 195 AKPANMFEREVKNAMRRWRYEPGKPGTGIVVNIVFRINGT 234
>gi|332091643|gb|EGI96723.1| protein tonB [Shigella boydii 5216-82]
Length = 235
Score = 36.0 bits (81), Expect = 6.0, Method: Composition-based stats.
Identities = 20/222 (9%), Positives = 50/222 (22%), Gaps = 18/222 (8%)
Query: 8 AISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGS 67
+S+ +H + L + Q++ + + +SV + D + + V
Sbjct: 14 LLSVCIHGAVVAGLLYTSVHQVIELPAPAQPISVTMVAPADLEPPQAVQPPPEPVVEPEP 73
Query: 68 SQ--------------ENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKES 113
E + + ++ + +
Sbjct: 74 EPEPIPEPPKEAPVVIEKPKPKPKPVKKVQEQPKRDVKPVESRPASPFENTAPTRPTSST 133
Query: 114 ALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRI 173
A +A ++ Q + V V+ D
Sbjct: 134 ATAATSKPVTSVASGPRALSRNQPQYPARAQALRIEGQVKVKFDVTPDGRVDNVQILSAK 193
Query: 174 PSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGF 215
P+ V+N + W + ++ G
Sbjct: 194 PANMFEREVKNAMRR-WRYEPGKPGSG---IVVNILFKINGT 231
>gi|149200601|ref|ZP_01877606.1| von Willebrand factor type A like domain [Lentisphaera araneosa
HTCC2155]
gi|149136303|gb|EDM24751.1| von Willebrand factor type A like domain [Lentisphaera araneosa
HTCC2155]
Length = 575
Score = 36.0 bits (81), Expect = 6.0, Method: Composition-based stats.
Identities = 28/180 (15%), Positives = 64/180 (35%), Gaps = 5/180 (2%)
Query: 1 MRLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP 60
M + + IS++ H + L+ F+ QL ++ + ++ + ++ + S ++E+
Sbjct: 8 MYIVISIVISLVFHALLALI----FSSQLTSVLNSFKSTTIKPLP-KEQYKSPAPRVEKW 62
Query: 61 VVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPV 120
+ K + L + + + K S+S + +K SA +
Sbjct: 63 EPKTKRDLDQELKNALRPSITPAKVKLEDLKINADIAPKVDSTSLAKLQMKMSAQIPGQS 122
Query: 121 SPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIA 180
+ + +S A K ID V D + K++ + S +I
Sbjct: 123 LSTQLPPQIYEIKPQLSDEHLSDANKSLIDKRVENTDDVGNQALSFKANDGQGISGSSIG 182
>gi|145610484|ref|XP_364165.2| hypothetical protein MGG_09010 [Magnaporthe oryzae 70-15]
gi|145017761|gb|EDK02124.1| hypothetical protein MGG_09010 [Magnaporthe oryzae 70-15]
Length = 417
Score = 36.0 bits (81), Expect = 6.0, Method: Composition-based stats.
Identities = 16/169 (9%), Positives = 46/169 (27%), Gaps = 6/169 (3%)
Query: 23 FNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQE-- 80
F+ N L + V+ + ++ P + S + ++
Sbjct: 38 FSLNPSDLASPPGSQEDPVELDALKTESAALRAVESTPTPEETSSPAAASEKKTKKRKSW 97
Query: 81 ----NGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQ 136
+ + +T+ + + + + +Q++ +
Sbjct: 98 GQVLPEPKTNLPPSCFRKRAKTEDEKEQRRVERVLRNRRAAQSSRERKRQEVEALEQRNA 157
Query: 137 DLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNR 185
L+ +K T+ + + V SS K + R++
Sbjct: 158 ALEQQLLHFQKLTQTMYQELQLRRREAGVVTSSEKPDGLTLTPELFRSQ 206
>gi|110667774|ref|YP_657585.1| hypothetical protein HQ1819A [Haloquadratum walsbyi DSM 16790]
gi|109625521|emb|CAJ51947.1| conserved hypothetical protein [Haloquadratum walsbyi DSM 16790]
Length = 665
Score = 36.0 bits (81), Expect = 6.0, Method: Composition-based stats.
Identities = 10/103 (9%), Positives = 41/103 (39%)
Query: 85 FSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFA 144
+ + + S S+ ++ + + + + +K+K + + + + +S
Sbjct: 133 EPVDIEEIKRKISSLESQRSEIDEKISDIESKKQRLPELEKRKENIESKISKKREELSKK 192
Query: 145 EKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVI 187
E + ++ D +E +++E + ++ + +R ++
Sbjct: 193 ETEIDESSRNISDSQEKEAELESKLDELRSTRSDLDSIRQQIE 235
>gi|62179321|ref|YP_215738.1| cell envelope integrity inner membrane protein TolA [Salmonella
enterica subsp. enterica serovar Choleraesuis str.
SC-B67]
gi|62126954|gb|AAX64657.1| tol protein, membrane spanning protein [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SC-B67]
Length = 386
Score = 36.0 bits (81), Expect = 6.0, Method: Composition-based stats.
Identities = 14/116 (12%), Positives = 42/116 (36%), Gaps = 1/116 (0%)
Query: 2 RLENGLAISMILHVMFLLLLYF-NFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP 60
+L+ + IS +LH++ +L + +F+ + ++D + + + ++
Sbjct: 10 KLKRAIIISAVLHIILFAVLIWSSFDEHIEASAGGGGGSAIDAVMVDPGAVVQQYNRQQD 69
Query: 61 VVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALL 116
++E + Q + + + K +++ +Q E A
Sbjct: 70 QQASARRAEEERKKLQQQQAEELQQKQAAEQERLKQLEKERLAAQEQQKQAEEAAK 125
>gi|24649701|ref|NP_733008.1| anastral spindle 1, isoform B [Drosophila melanogaster]
gi|15291621|gb|AAK93079.1| LD07765p [Drosophila melanogaster]
gi|23172179|gb|AAN13999.1| anastral spindle 1, isoform B [Drosophila melanogaster]
Length = 1089
Score = 36.0 bits (81), Expect = 6.0, Method: Composition-based stats.
Identities = 18/154 (11%), Positives = 39/154 (25%)
Query: 79 QENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDL 138
Q+ + E T + + + R +Q K +
Sbjct: 417 QQTNKEKEQTREKMPRERPTPQGDRKNAAPPQESGKIRRTQEGDRQQQTNGAVQQKREQK 476
Query: 139 QGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKR 198
+ K L + E S+R R+ + + +
Sbjct: 477 TVKQGSGADKSTNRFAPEKSKALSTSEESSARNMERYAQLTENCTQRIAELTELITKVRE 536
Query: 199 FKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVR 232
K+ V++ N G +++ G + R
Sbjct: 537 EKQRLVEVTLTSNSDGERQSTEYLELPTGQQQTR 570
>gi|212712434|ref|ZP_03320562.1| hypothetical protein PROVALCAL_03528 [Providencia alcalifaciens DSM
30120]
gi|212684891|gb|EEB44419.1| hypothetical protein PROVALCAL_03528 [Providencia alcalifaciens DSM
30120]
Length = 372
Score = 36.0 bits (81), Expect = 6.1, Method: Composition-based stats.
Identities = 14/132 (10%), Positives = 41/132 (31%), Gaps = 1/132 (0%)
Query: 3 LENGLAISMILHVMFLLLLYF-NFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPV 61
L+ L +S+ LH++ + L+ + + + E +D + + + +
Sbjct: 11 LKRSLMMSIGLHILLVALIVIGSLVTVVQLGGGGEEGTVIDAVMVDPGAVVEQYNQAQQQ 70
Query: 62 VQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVS 121
+ + Q+ R + + + + ++ E ++
Sbjct: 71 QKSSQQVAKERKEQQQKQDAELREKQEQEQKRLQKLEEERIQTQRETEQQKKQAEEQQKQ 130
Query: 122 PYDKQKISKATN 133
D K +K
Sbjct: 131 ALDAAKKAKEEQ 142
Score = 35.3 bits (79), Expect = 8.4, Method: Composition-based stats.
Identities = 14/120 (11%), Positives = 31/120 (25%), Gaps = 10/120 (8%)
Query: 152 VVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLN 211
+KS ++ + + + ++ ++ +L
Sbjct: 260 SKQGGQTAAGSGGGKKSGASNADVDSYAGKIKAAIQSKFYDSESYRGR---TCELQLKLA 316
Query: 212 QKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQ-AFRLSPSTYKSWRN--ITLFFVP 268
G ++ L E A +A + S Y ++ TL F P
Sbjct: 317 PDGLLVS----ITPKSGSANDPALCEAAIRAAKLATMPKPPSREVYDTFNKSGSTLVFKP 372
>gi|332674141|gb|AEE70958.1| siderophore-mediated iron transport protein TonB [Helicobacter
pylori 83]
Length = 287
Score = 36.0 bits (81), Expect = 6.2, Method: Composition-based stats.
Identities = 14/120 (11%), Positives = 34/120 (28%), Gaps = 6/120 (5%)
Query: 136 QDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSD 195
+ ++ + +K + E + S + + ++ + + P
Sbjct: 157 SAPKQVTTKDVVKEKDKQEESNKTSEGATSEAQAYNPGVSNEFLMKIQTAISSKNRYPKM 216
Query: 196 FKRFK-KLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPS 254
+ + V + F +N G V V +L A A+ + P
Sbjct: 217 AQIRGIEGEVLVSFVINPDGSVTDIKVVKSNTTD-----ILNHAALDAIKNAAHLFPKPE 271
>gi|293609863|ref|ZP_06692165.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292828315|gb|EFF86678.1| conserved hypothetical protein [Acinetobacter sp. SH024]
Length = 473
Score = 36.0 bits (81), Expect = 6.2, Method: Composition-based stats.
Identities = 23/210 (10%), Positives = 64/210 (30%), Gaps = 8/210 (3%)
Query: 45 YNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSS 104
D K + Q ++ D ++ + K A ++ +
Sbjct: 255 QKADEAKRKAEADARAKQQKAEEAKRKAEADAKAKQQKANDEAKRKAEADAKAKQQKADD 314
Query: 105 KGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSK 164
+A ++ + ++ + A K+Q + + ++ +K
Sbjct: 315 AKRKAEADAKAKQKAADDAKRKAEADAKAKQQKAADDAKRKAEAEAEAKAASAQKAQEEA 374
Query: 165 VEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDV 224
+K + + + A ++ +W++P+ V + F L+ G V +
Sbjct: 375 AQKKAEAKKVASSARRDFEQKIRRSWDVPTGSSGK---TVGVRFTLSDSGSVNSIVITRS 431
Query: 225 VGGTELVRRMLRENARKAVIKSQAFRLSPS 254
G L + + A+ + + +
Sbjct: 432 SGDD-----ALDASIKAAIQAAAPYPMPSD 456
>gi|161504091|ref|YP_001571203.1| cell envelope integrity inner membrane protein TolA [Salmonella
enterica subsp. arizonae serovar 62:z4,z23:-- str.
RSK2980]
gi|160865438|gb|ABX22061.1| hypothetical protein SARI_02189 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 386
Score = 36.0 bits (81), Expect = 6.2, Method: Composition-based stats.
Identities = 18/132 (13%), Positives = 36/132 (27%), Gaps = 13/132 (9%)
Query: 137 DLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDF 196
DL A K K+ + ++ + + D
Sbjct: 264 DLSSGKNAPKTGGGAKGNGQPSKDSGTSGANGGATGADISAYAKQIQVAIQ---SRLYDA 320
Query: 197 KRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPST- 255
++ + +H L G + + GG + + A+ A PS
Sbjct: 321 SLYQGKQCVLHISLAPDGSLKS---ITSEGGDPALCQAALMAAKTA-----KIPKPPSQA 372
Query: 256 -YKSWRNITLFF 266
Y+ ++ L F
Sbjct: 373 VYEKIKDAKLDF 384
>gi|6289105|gb|AAD00616.2| outer membrane lipoprotein [Actinobacillus pleuropneumoniae serovar
8 str. 405]
Length = 368
Score = 36.0 bits (81), Expect = 6.2, Method: Composition-based stats.
Identities = 17/141 (12%), Positives = 41/141 (29%), Gaps = 7/141 (4%)
Query: 1 MRLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP 60
M + L S++ V+ + P S + D + K ++ ++
Sbjct: 1 MNIATKLMASLVASVVLTACSGGGSSGSSSKPNS-------ELTPKVDMSAPKAEQPKKE 53
Query: 61 VVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPV 120
V +S+ ++ + Q + + + K + +
Sbjct: 54 EVPQADNSKAEEPKEMAPQVDSPKAEEPKNMAPQMGNPKLNDPQVMAPKMDNPQKDAPKG 113
Query: 121 SPYDKQKISKATNKEQDLQGI 141
K K + KE ++ I
Sbjct: 114 EELSKDKSNAEILKELGVKDI 134
>gi|116193499|ref|XP_001222562.1| hypothetical protein CHGG_06467 [Chaetomium globosum CBS 148.51]
gi|88182380|gb|EAQ89848.1| hypothetical protein CHGG_06467 [Chaetomium globosum CBS 148.51]
Length = 2317
Score = 36.0 bits (81), Expect = 6.2, Method: Composition-based stats.
Identities = 28/235 (11%), Positives = 58/235 (24%), Gaps = 23/235 (9%)
Query: 25 FNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQEN-GD 83
+ +VD D +S + + +E+L + V E+
Sbjct: 1090 WAAPTEQTTDTVSDKNVD--QITDASASPETDATVNIEPAVAAKEESLTPEEQVAESVEK 1147
Query: 84 RFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISF 143
+Q + T + + S + K+ A+
Sbjct: 1148 PVEEQVLSDPVPPPTAAPQPPAAAENIAASDDAQASPPQPPKRSGLAASRFAAPTSPTEE 1207
Query: 144 AEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLR 203
E ++ V P ++LL+ + + + +D
Sbjct: 1208 DEPAVVERAVSPPISEKLLTPSTVERDEPAVGDLIAEQSMADIDEVMRLMND-------- 1259
Query: 204 VKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPSTYKS 258
+ V + R +A V S RL P +Y+
Sbjct: 1260 -------DPDMGVNRTYDDQSPWHEASPIRP---SAL--VTDSSPTRLPPPSYER 1302
>gi|299472464|emb|CBN79737.1| hypothetical protein Esi_0430_0011 [Ectocarpus siliculosus]
Length = 1403
Score = 36.0 bits (81), Expect = 6.2, Method: Composition-based stats.
Identities = 14/110 (12%), Positives = 30/110 (27%)
Query: 26 NVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRF 85
V+++ P++ + V+ E + + V Q R
Sbjct: 588 PVEVVPPVASATDMPVEQPAAELEVAPAPVAAPVEQPVEVTPPVASPVAKPVEQPVAARS 647
Query: 86 SDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKE 135
+ T T +++ ++A SA P + E
Sbjct: 648 VPEPPTPDVPAPTVEEPAAEEDKAPPVSAPAAGPAPVSPTVPAASPEEPE 697
>gi|237731733|ref|ZP_04562214.1| transporter TonB [Citrobacter sp. 30_2]
gi|226907272|gb|EEH93190.1| transporter TonB [Citrobacter sp. 30_2]
Length = 256
Score = 36.0 bits (81), Expect = 6.3, Method: Composition-based stats.
Identities = 23/222 (10%), Positives = 57/222 (25%), Gaps = 20/222 (9%)
Query: 8 AISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQF--- 64
+S+ +H + L + Q++ + + +SV + D + + V
Sbjct: 31 LLSVGIHGAVVAGLLYTSVHQVIELPAPAQPISVTMVAPADLEPPQAVQPPPEPVVEPEP 90
Query: 65 ---------------KGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQA 109
+ + + + A ++ +
Sbjct: 91 EPEPIPEPPKEAPVVIEKPKPKPKPKPKPVKKVEEQPKRDVKPAEPRPASPVENTAPTRT 150
Query: 110 LKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSS 169
+ +A +A ++ Q + V V+ +
Sbjct: 151 MTNTAPATTSKPVVSAPSGPRALSRNQPQYPARAQALRIEGRVKVKFNVTPDGRVENVEI 210
Query: 170 RKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLN 211
P+ V+N + W + L V + F+LN
Sbjct: 211 LSAQPANMFEREVKNAMRR-WRYEAGKPGS-GLVVNIVFKLN 250
>gi|205352011|ref|YP_002225812.1| cell envelope integrity inner membrane protein TolA [Salmonella
enterica subsp. enterica serovar Gallinarum str. 287/91]
gi|205271792|emb|CAR36626.1| tolA protein [Salmonella enterica subsp. enterica serovar
Gallinarum str. 287/91]
gi|326627052|gb|EGE33395.1| cell envelope integrity inner membrane protein TolA [Salmonella
enterica subsp. enterica serovar Gallinarum str. 9]
Length = 436
Score = 36.0 bits (81), Expect = 6.3, Method: Composition-based stats.
Identities = 14/116 (12%), Positives = 42/116 (36%), Gaps = 1/116 (0%)
Query: 2 RLENGLAISMILHVMFLLLLYF-NFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP 60
+L+ + IS +LH++ +L + +F+ + ++D + + + ++
Sbjct: 10 KLKRAIIISAVLHIILFAVLIWSSFDEHIEASAGGGGGSAIDAVMVDPGAVVQQYNRQQD 69
Query: 61 VVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALL 116
++E + Q + + + K +++ +Q E A
Sbjct: 70 QQASARRAEEERKKLQQQQAEELQQKQAAEQERLKQLEKERLAAQEQQKQAEEAAK 125
>gi|297620363|ref|YP_003708500.1| putative TolA protein of Tol-Pal system [Waddlia chondrophila WSU
86-1044]
gi|297375664|gb|ADI37494.1| putative TolA protein of Tol-Pal system [Waddlia chondrophila WSU
86-1044]
Length = 218
Score = 35.6 bits (80), Expect = 6.4, Method: Composition-based stats.
Identities = 16/158 (10%), Positives = 39/158 (24%), Gaps = 2/158 (1%)
Query: 75 DFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNK 134
S ++ +T E + + Q K + + P+ ++K K
Sbjct: 30 PESRFPLQEKLVVRTIHLTQEKKAETIPKKLPAQIKKNAPKKKQPLLKKTEKKTEPRQEK 89
Query: 135 EQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPS 194
+ + + + K K +++ A
Sbjct: 90 GLRQEERMESLIAQARQQLSQVGKASKAMDQAKRVETLKIDGVEDHGYYSQLAACLKENL 149
Query: 195 DFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVR 232
F V++ L+ +G V+ +
Sbjct: 150 RLPEFG--EVRVSLTLDCRGKVIQVKIIGAQNENNKRY 185
>gi|15600866|ref|NP_232496.1| hypothetical protein VCA0095 [Vibrio cholerae O1 biovar eltor str.
N16961]
gi|121586864|ref|ZP_01676645.1| hypothetical protein VC274080_A0125 [Vibrio cholerae 2740-80]
gi|121726998|ref|ZP_01680194.1| hypothetical protein VCV52_A0113 [Vibrio cholerae V52]
gi|147672338|ref|YP_001214885.1| hypothetical protein VC0395_0044 [Vibrio cholerae O395]
gi|153817692|ref|ZP_01970359.1| hypothetical protein A5C_A0139 [Vibrio cholerae NCTC 8457]
gi|153821663|ref|ZP_01974330.1| hypothetical protein A5E_A0126 [Vibrio cholerae B33]
gi|227811721|ref|YP_002811731.1| hypothetical protein VCM66_A0093 [Vibrio cholerae M66-2]
gi|229506736|ref|ZP_04396245.1| hypothetical protein VCF_001958 [Vibrio cholerae BX 330286]
gi|229510470|ref|ZP_04399950.1| hypothetical protein VCE_001876 [Vibrio cholerae B33]
gi|229517399|ref|ZP_04406844.1| hypothetical protein VCC_001422 [Vibrio cholerae RC9]
gi|229605209|ref|YP_002875913.1| hypothetical protein VCD_000149 [Vibrio cholerae MJ-1236]
gi|254850360|ref|ZP_05239710.1| conserved hypothetical protein [Vibrio cholerae MO10]
gi|298499958|ref|ZP_07009764.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
gi|9657481|gb|AAF96009.1| hypothetical protein VC_A0095 [Vibrio cholerae O1 biovar El Tor
str. N16961]
gi|121548907|gb|EAX58948.1| hypothetical protein VC274080_A0125 [Vibrio cholerae 2740-80]
gi|121630632|gb|EAX63021.1| hypothetical protein VCV52_A0113 [Vibrio cholerae V52]
gi|126511734|gb|EAZ74328.1| hypothetical protein A5C_A0139 [Vibrio cholerae NCTC 8457]
gi|126520860|gb|EAZ78083.1| hypothetical protein A5E_A0126 [Vibrio cholerae B33]
gi|146314721|gb|ABQ19261.1| hypothetical protein VC0395_0044 [Vibrio cholerae O395]
gi|227010863|gb|ACP07074.1| conserved hypothetical protein [Vibrio cholerae M66-2]
gi|227014726|gb|ACP10935.1| conserved hypothetical protein [Vibrio cholerae O395]
gi|229345435|gb|EEO10408.1| hypothetical protein VCC_001422 [Vibrio cholerae RC9]
gi|229352915|gb|EEO17855.1| hypothetical protein VCE_001876 [Vibrio cholerae B33]
gi|229357087|gb|EEO22005.1| hypothetical protein VCF_001958 [Vibrio cholerae BX 330286]
gi|229371695|gb|ACQ62117.1| hypothetical protein VCD_000149 [Vibrio cholerae MJ-1236]
gi|254846065|gb|EET24479.1| conserved hypothetical protein [Vibrio cholerae MO10]
gi|297541939|gb|EFH77990.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
Length = 232
Score = 35.6 bits (80), Expect = 6.4, Method: Composition-based stats.
Identities = 13/164 (7%), Positives = 44/164 (26%), Gaps = 2/164 (1%)
Query: 1 MRLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP 60
M+L L +S ++ + FL + F + + I + + E P
Sbjct: 4 MKLSRMLFLSFVV-LFFLGISLLYFTYSSTPRTNLPDERQEHVIAPKPAPEIELSIHEHP 62
Query: 61 VVQ-FKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMP 119
V+ ++ ++ ++ + + + + K A+ +
Sbjct: 63 AVELESTENRVVNEQEEVQEQGEAPRVIEPQNLEQVWLPINPTPELADLKPKSQAVTDIQ 122
Query: 120 VSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLS 163
++ + + + + + +
Sbjct: 123 AIEFENIDQFRVLMAGDSATLPLPNGESIRVLIDEAQTQAQGIQ 166
>gi|322615819|gb|EFY12737.1| cell envelope integrity inner membrane protein TolA [Salmonella
enterica subsp. enterica serovar Montevideo str.
315996572]
gi|322621378|gb|EFY18234.1| cell envelope integrity inner membrane protein TolA [Salmonella
enterica subsp. enterica serovar Montevideo str.
495297-1]
gi|322623635|gb|EFY20473.1| cell envelope integrity inner membrane protein TolA [Salmonella
enterica subsp. enterica serovar Montevideo str.
495297-3]
gi|322634887|gb|EFY31617.1| cell envelope integrity inner membrane protein TolA [Salmonella
enterica subsp. enterica serovar Montevideo str.
515920-1]
gi|322636585|gb|EFY33289.1| cell envelope integrity inner membrane protein TolA [Salmonella
enterica subsp. enterica serovar Montevideo str.
515920-2]
gi|322647826|gb|EFY44306.1| cell envelope integrity inner membrane protein TolA [Salmonella
enterica subsp. enterica serovar Montevideo str.
NC_MB110209-0054]
gi|322652659|gb|EFY49008.1| cell envelope integrity inner membrane protein TolA [Salmonella
enterica subsp. enterica serovar Montevideo str.
CASC_09SCPH15965]
gi|322664931|gb|EFY61122.1| cell envelope integrity inner membrane protein TolA [Salmonella
enterica subsp. enterica serovar Montevideo str.
81038-01]
gi|322668400|gb|EFY64556.1| cell envelope integrity inner membrane protein TolA [Salmonella
enterica subsp. enterica serovar Montevideo str.
MD_MDA09249507]
gi|322670512|gb|EFY66645.1| cell envelope integrity inner membrane protein TolA [Salmonella
enterica subsp. enterica serovar Montevideo str. 414877]
gi|322675252|gb|EFY71328.1| cell envelope integrity inner membrane protein TolA [Salmonella
enterica subsp. enterica serovar Montevideo str. 366867]
gi|322679678|gb|EFY75719.1| cell envelope integrity inner membrane protein TolA [Salmonella
enterica subsp. enterica serovar Montevideo str. 413180]
gi|322684846|gb|EFY80845.1| cell envelope integrity inner membrane protein TolA [Salmonella
enterica subsp. enterica serovar Montevideo str. 446600]
gi|323200615|gb|EFZ85690.1| cell envelope integrity inner membrane protein TolA [Salmonella
enterica subsp. enterica serovar Montevideo str.
556150-1]
gi|323202286|gb|EFZ87334.1| cell envelope integrity inner membrane protein TolA [Salmonella
enterica subsp. enterica serovar Montevideo str. 609460]
gi|323231000|gb|EGA15116.1| cell envelope integrity inner membrane protein TolA [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB111609-0052]
gi|323234167|gb|EGA18256.1| cell envelope integrity inner membrane protein TolA [Salmonella
enterica subsp. enterica serovar Montevideo str.
2009083312]
gi|323238138|gb|EGA22196.1| cell envelope integrity inner membrane protein TolA [Salmonella
enterica subsp. enterica serovar Montevideo str.
2009085258]
gi|323243573|gb|EGA27591.1| cell envelope integrity inner membrane protein TolA [Salmonella
enterica subsp. enterica serovar Montevideo str.
315731156]
gi|323247402|gb|EGA31361.1| cell envelope integrity inner membrane protein TolA [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2009159199]
gi|323264696|gb|EGA48198.1| cell envelope integrity inner membrane protein TolA [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008285]
gi|323270960|gb|EGA54395.1| cell envelope integrity inner membrane protein TolA [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008287]
Length = 392
Score = 35.6 bits (80), Expect = 6.4, Method: Composition-based stats.
Identities = 14/116 (12%), Positives = 42/116 (36%), Gaps = 1/116 (0%)
Query: 2 RLENGLAISMILHVMFLLLLYF-NFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP 60
+L+ + IS +LH++ +L + +F+ + ++D + + + ++
Sbjct: 10 KLKRAIIISAVLHIILFAVLIWSSFDEHIEASAGGGGGSAIDAVMVDPGAVVQQYNRQQD 69
Query: 61 VVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALL 116
++E + Q + + + K +++ +Q E A
Sbjct: 70 QQASARRAEEERKKLQQQQAEELQQKQAAEQERLKQLEKERLAAQEQQKQAEEAAK 125
>gi|229526273|ref|ZP_04415677.1| hypothetical protein VCA_000390 [Vibrio cholerae bv. albensis
VL426]
gi|229336431|gb|EEO01449.1| hypothetical protein VCA_000390 [Vibrio cholerae bv. albensis
VL426]
Length = 232
Score = 35.6 bits (80), Expect = 6.4, Method: Composition-based stats.
Identities = 13/164 (7%), Positives = 44/164 (26%), Gaps = 2/164 (1%)
Query: 1 MRLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP 60
M+L L +S ++ + FL + F + + I + + E P
Sbjct: 4 MKLSRMLFLSFVV-LFFLGISLLYFTYSSTPRTNLPDERQEHVIAPKPAPEIELSIHEHP 62
Query: 61 VVQ-FKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMP 119
V+ ++ ++ ++ + + + + K A+ +
Sbjct: 63 AVELESTENRVVNEQEEVQEQGEAPRVIEPQNLEQVWLPINPTPELADLKPKSQAVTDIQ 122
Query: 120 VSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLS 163
++ + + + + + +
Sbjct: 123 AIEFENIDQFRVLMAGDSATLPLPNGESIRVLIDEAQTQAQGIQ 166
>gi|224582566|ref|YP_002636364.1| cell envelope integrity inner membrane protein TolA [Salmonella
enterica subsp. enterica serovar Paratyphi C strain
RKS4594]
gi|224467093|gb|ACN44923.1| cell envelope integrity inner membrane protein TolA [Salmonella
enterica subsp. enterica serovar Paratyphi C strain
RKS4594]
gi|322713792|gb|EFZ05363.1| cell envelope integrity inner membrane protein TolA [Salmonella
enterica subsp. enterica serovar Choleraesuis str. A50]
Length = 386
Score = 35.6 bits (80), Expect = 6.4, Method: Composition-based stats.
Identities = 14/116 (12%), Positives = 42/116 (36%), Gaps = 1/116 (0%)
Query: 2 RLENGLAISMILHVMFLLLLYF-NFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP 60
+L+ + IS +LH++ +L + +F+ + ++D + + + ++
Sbjct: 10 KLKRAIIISAVLHIILFAVLIWSSFDEHIEASAGGGGGSAIDAVMVDPGAVVQQYNRQQD 69
Query: 61 VVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALL 116
++E + Q + + + K +++ +Q E A
Sbjct: 70 QQASARRAEEERKKLQQQQAEELQQKQAAEQERLKQLEKERLAAQEQQKQAEEAAK 125
>gi|200390002|ref|ZP_03216613.1| protein TolA [Salmonella enterica subsp. enterica serovar Virchow
str. SL491]
gi|199602447|gb|EDZ00993.1| protein TolA [Salmonella enterica subsp. enterica serovar Virchow
str. SL491]
Length = 392
Score = 35.6 bits (80), Expect = 6.4, Method: Composition-based stats.
Identities = 14/116 (12%), Positives = 42/116 (36%), Gaps = 1/116 (0%)
Query: 2 RLENGLAISMILHVMFLLLLYF-NFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP 60
+L+ + IS +LH++ +L + +F+ + ++D + + + ++
Sbjct: 10 KLKRAIIISAVLHIILFAVLIWSSFDEHIEASAGGGGGSAIDAVMVDPGAVVQQYNRQQD 69
Query: 61 VVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALL 116
++E + Q + + + K +++ +Q E A
Sbjct: 70 QQASARRAEEERKKLQQQQAEELQQKQAAEQERLKQLEKERLAAQEQQKQAEEAAK 125
>gi|168820118|ref|ZP_02832118.1| protein TolA [Salmonella enterica subsp. enterica serovar
Weltevreden str. HI_N05-537]
gi|205343238|gb|EDZ30002.1| protein TolA [Salmonella enterica subsp. enterica serovar
Weltevreden str. HI_N05-537]
gi|320085018|emb|CBY94807.1| Protein tolA [Salmonella enterica subsp. enterica serovar
Weltevreden str. 2007-60-3289-1]
Length = 392
Score = 35.6 bits (80), Expect = 6.4, Method: Composition-based stats.
Identities = 14/116 (12%), Positives = 42/116 (36%), Gaps = 1/116 (0%)
Query: 2 RLENGLAISMILHVMFLLLLYF-NFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP 60
+L+ + IS +LH++ +L + +F+ + ++D + + + ++
Sbjct: 10 KLKRAIIISAVLHIILFAVLIWSSFDEHIEASAGGGGGSAIDAVMVDPGAVVQQYNRQQD 69
Query: 61 VVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALL 116
++E + Q + + + K +++ +Q E A
Sbjct: 70 QQASARRAEEERKKLQQQQAEELQQKQAAEQERLKQLEKERLAAQEQQKQAEEAAK 125
>gi|168240605|ref|ZP_02665537.1| protein TolA [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL486]
gi|194445627|ref|YP_002039988.1| cell envelope integrity inner membrane protein TolA [Salmonella
enterica subsp. enterica serovar Newport str. SL254]
gi|194449657|ref|YP_002044781.1| cell envelope integrity inner membrane protein TolA [Salmonella
enterica subsp. enterica serovar Heidelberg str. SL476]
gi|194404290|gb|ACF64512.1| protein TolA [Salmonella enterica subsp. enterica serovar Newport
str. SL254]
gi|194407961|gb|ACF68180.1| protein TolA [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL476]
gi|205340148|gb|EDZ26912.1| protein TolA [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL486]
Length = 392
Score = 35.6 bits (80), Expect = 6.4, Method: Composition-based stats.
Identities = 14/116 (12%), Positives = 42/116 (36%), Gaps = 1/116 (0%)
Query: 2 RLENGLAISMILHVMFLLLLYF-NFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP 60
+L+ + IS +LH++ +L + +F+ + ++D + + + ++
Sbjct: 10 KLKRAIIISAVLHIILFAVLIWSSFDEHIEASAGGGGGSAIDAVMVDPGAVVQQYNRQQD 69
Query: 61 VVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALL 116
++E + Q + + + K +++ +Q E A
Sbjct: 70 QQASARRAEEERKKLQQQQAEELQQKQAAEQERLKQLEKERLAAQEQQKQAEEAAK 125
>gi|204929958|ref|ZP_03220979.1| protein TolA [Salmonella enterica subsp. enterica serovar Javiana
str. GA_MM04042433]
gi|204320952|gb|EDZ06153.1| protein TolA [Salmonella enterica subsp. enterica serovar Javiana
str. GA_MM04042433]
Length = 392
Score = 35.6 bits (80), Expect = 6.4, Method: Composition-based stats.
Identities = 14/116 (12%), Positives = 42/116 (36%), Gaps = 1/116 (0%)
Query: 2 RLENGLAISMILHVMFLLLLYF-NFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP 60
+L+ + IS +LH++ +L + +F+ + ++D + + + ++
Sbjct: 10 KLKRAIIISAVLHIILFAVLIWSSFDEHIEASAGGGGGSAIDAVMVDPGAVVQQYNRQQD 69
Query: 61 VVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALL 116
++E + Q + + + K +++ +Q E A
Sbjct: 70 QQASARRAEEERKKLQQQQAEELQQKQAAEQERLKQLEKERLAAQEQQKQAEEAAK 125
>gi|197249465|ref|YP_002145708.1| cell envelope integrity inner membrane protein TolA [Salmonella
enterica subsp. enterica serovar Agona str. SL483]
gi|197213168|gb|ACH50565.1| protein TolA [Salmonella enterica subsp. enterica serovar Agona
str. SL483]
Length = 392
Score = 35.6 bits (80), Expect = 6.4, Method: Composition-based stats.
Identities = 14/116 (12%), Positives = 42/116 (36%), Gaps = 1/116 (0%)
Query: 2 RLENGLAISMILHVMFLLLLYF-NFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP 60
+L+ + IS +LH++ +L + +F+ + ++D + + + ++
Sbjct: 10 KLKRAIIISAVLHIILFAVLIWSSFDEHIEASAGGGGGSAIDAVMVDPGAVVQQYNRQQD 69
Query: 61 VVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALL 116
++E + Q + + + K +++ +Q E A
Sbjct: 70 QQASARRAEEERKKLQQQQAEELQQKQAAEQERLKQLEKERLAAQEQQKQAEEAAK 125
>gi|168230632|ref|ZP_02655690.1| protein TolA [Salmonella enterica subsp. enterica serovar Kentucky
str. CDC 191]
gi|194468543|ref|ZP_03074527.1| protein TolA [Salmonella enterica subsp. enterica serovar Kentucky
str. CVM29188]
gi|194454907|gb|EDX43746.1| protein TolA [Salmonella enterica subsp. enterica serovar Kentucky
str. CVM29188]
gi|205334698|gb|EDZ21462.1| protein TolA [Salmonella enterica subsp. enterica serovar Kentucky
str. CDC 191]
Length = 390
Score = 35.6 bits (80), Expect = 6.4, Method: Composition-based stats.
Identities = 14/116 (12%), Positives = 42/116 (36%), Gaps = 1/116 (0%)
Query: 2 RLENGLAISMILHVMFLLLLYF-NFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP 60
+L+ + IS +LH++ +L + +F+ + ++D + + + ++
Sbjct: 10 KLKRAIIISAVLHIILFAVLIWSSFDEHIEASAGGGGGSAIDAVMVDPGAVVQQYNRQQD 69
Query: 61 VVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALL 116
++E + Q + + + K +++ +Q E A
Sbjct: 70 QQASARRAEEERKKLQQQQAEELQQKQAAEQERLKQLEKERLAAQEQQKQAEEAAK 125
>gi|198244347|ref|YP_002214717.1| cell envelope integrity inner membrane protein TolA [Salmonella
enterica subsp. enterica serovar Dublin str.
CT_02021853]
gi|207856191|ref|YP_002242842.1| cell envelope integrity inner membrane protein TolA [Salmonella
enterica subsp. enterica serovar Enteritidis str.
P125109]
gi|197938863|gb|ACH76196.1| protein TolA [Salmonella enterica subsp. enterica serovar Dublin
str. CT_02021853]
gi|206707994|emb|CAR32283.1| tolA protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. P125109]
gi|326622473|gb|EGE28818.1| protein TolA [Salmonella enterica subsp. enterica serovar Dublin
str. 3246]
Length = 392
Score = 35.6 bits (80), Expect = 6.4, Method: Composition-based stats.
Identities = 14/116 (12%), Positives = 42/116 (36%), Gaps = 1/116 (0%)
Query: 2 RLENGLAISMILHVMFLLLLYF-NFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP 60
+L+ + IS +LH++ +L + +F+ + ++D + + + ++
Sbjct: 10 KLKRAIIISAVLHIILFAVLIWSSFDEHIEASAGGGGGSAIDAVMVDPGAVVQQYNRQQD 69
Query: 61 VVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALL 116
++E + Q + + + K +++ +Q E A
Sbjct: 70 QQASARRAEEERKKLQQQQAEELQQKQAAEQERLKQLEKERLAAQEQQKQAEEAAK 125
>gi|161615019|ref|YP_001588984.1| cell envelope integrity inner membrane protein TolA [Salmonella
enterica subsp. enterica serovar Paratyphi B str. SPB7]
gi|168264357|ref|ZP_02686330.1| protein TolA [Salmonella enterica subsp. enterica serovar Hadar
str. RI_05P066]
gi|168467690|ref|ZP_02701527.1| protein TolA [Salmonella enterica subsp. enterica serovar Newport
str. SL317]
gi|161364383|gb|ABX68151.1| hypothetical protein SPAB_02779 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|195629194|gb|EDX48562.1| protein TolA [Salmonella enterica subsp. enterica serovar Newport
str. SL317]
gi|205347190|gb|EDZ33821.1| protein TolA [Salmonella enterica subsp. enterica serovar Hadar
str. RI_05P066]
Length = 392
Score = 35.6 bits (80), Expect = 6.4, Method: Composition-based stats.
Identities = 14/116 (12%), Positives = 42/116 (36%), Gaps = 1/116 (0%)
Query: 2 RLENGLAISMILHVMFLLLLYF-NFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP 60
+L+ + IS +LH++ +L + +F+ + ++D + + + ++
Sbjct: 10 KLKRAIIISAVLHIILFAVLIWSSFDEHIEASAGGGGGSAIDAVMVDPGAVVQQYNRQQD 69
Query: 61 VVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALL 116
++E + Q + + + K +++ +Q E A
Sbjct: 70 QQASARRAEEERKKLQQQQAEELQQKQAAEQERLKQLEKERLAAQEQQKQAEEAAK 125
>gi|56414136|ref|YP_151211.1| cell envelope integrity inner membrane protein TolA [Salmonella
enterica subsp. enterica serovar Paratyphi A str. ATCC
9150]
gi|197363058|ref|YP_002142695.1| cell envelope integrity inner membrane protein TolA [Salmonella
enterica subsp. enterica serovar Paratyphi A str.
AKU_12601]
gi|56128393|gb|AAV77899.1| tolA protein [Salmonella enterica subsp. enterica serovar Paratyphi
A str. ATCC 9150]
gi|197094535|emb|CAR60055.1| tolA protein [Salmonella enterica subsp. enterica serovar Paratyphi
A str. AKU_12601]
Length = 389
Score = 35.6 bits (80), Expect = 6.4, Method: Composition-based stats.
Identities = 14/116 (12%), Positives = 42/116 (36%), Gaps = 1/116 (0%)
Query: 2 RLENGLAISMILHVMFLLLLYF-NFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP 60
+L+ + IS +LH++ +L + +F+ + ++D + + + ++
Sbjct: 10 KLKRAIIISAVLHIILFAVLIWSSFDEHIEASAGGGGGSAIDAVMVDPGAVVQQYNRQQD 69
Query: 61 VVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALL 116
++E + Q + + + K +++ +Q E A
Sbjct: 70 QQASARRAEEERKKLQQQQAEELQQKQAAEQERLKQLEKERLAAQEQQKQAEEAAK 125
>gi|16764117|ref|NP_459732.1| cell envelope integrity inner membrane protein TolA [Salmonella
enterica subsp. enterica serovar Typhimurium str. LT2]
gi|16419257|gb|AAL19691.1| tol protein, membrane spanning protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. LT2]
gi|261246010|emb|CBG23812.1| TolA protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. D23580]
gi|267992488|gb|ACY87373.1| cell envelope integrity inner membrane protein TolA [Salmonella
enterica subsp. enterica serovar Typhimurium str.
14028S]
gi|301157338|emb|CBW16827.1| tolA protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. SL1344]
gi|312911774|dbj|BAJ35748.1| cell envelope integrity inner membrane protein TolA [Salmonella
enterica subsp. enterica serovar Typhimurium str.
T000240]
gi|321226326|gb|EFX51377.1| TolA protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. TN061786]
gi|323129059|gb|ADX16489.1| cell envelope integrity inner membrane protein TolA [Salmonella
enterica subsp. enterica serovar Typhimurium str. 4/74]
gi|332987684|gb|AEF06667.1| cell envelope integrity inner membrane protein TolA [Salmonella
enterica subsp. enterica serovar Typhimurium str. UK-1]
Length = 407
Score = 35.6 bits (80), Expect = 6.4, Method: Composition-based stats.
Identities = 14/116 (12%), Positives = 42/116 (36%), Gaps = 1/116 (0%)
Query: 2 RLENGLAISMILHVMFLLLLYF-NFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP 60
+L+ + IS +LH++ +L + +F+ + ++D + + + ++
Sbjct: 10 KLKRAIIISAVLHIILFAVLIWSSFDEHIEASAGGGGGSAIDAVMVDPGAVVQQYNRQQD 69
Query: 61 VVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALL 116
++E + Q + + + K +++ +Q E A
Sbjct: 70 QQASARRAEEERKKLQQQQAEELQQKQAAEQERLKQLEKERLAAQEQQKQAEEAAK 125
>gi|326434994|gb|EGD80564.1| hypothetical protein PTSG_01156 [Salpingoeca sp. ATCC 50818]
Length = 1105
Score = 35.6 bits (80), Expect = 6.5, Method: Composition-based stats.
Identities = 16/149 (10%), Positives = 49/149 (32%)
Query: 40 SVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETK 99
+D + + S K K K N S + ++ +
Sbjct: 945 PIDALNDLARTSPKKKAKVSSPFSAKAPRALNPPAKQSKPKKPVSGYLLWLKENRKDIIQ 1004
Query: 100 RSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKK 159
+ K ++ +K++ + +SP +K K ++ E+ S +S +++
Sbjct: 1005 QFPELKPKEVVKKAGEIWRTLSPEEKSKYARPATSEKKPAPASAPSSRSDSDDSDDDEEE 1064
Query: 160 ELLSKVEKSSRKRIPSQDAIAIVRNRVIA 188
+ +++ + + + +++
Sbjct: 1065 SEKTSTTANNKNTKENANGVEDEQSQQEP 1093
>gi|157369521|ref|YP_001477510.1| cell envelope integrity inner membrane protein TolA [Serratia
proteamaculans 568]
gi|157321285|gb|ABV40382.1| Tol-Pal system TolA [Serratia proteamaculans 568]
Length = 412
Score = 35.6 bits (80), Expect = 6.5, Method: Composition-based stats.
Identities = 13/115 (11%), Positives = 37/115 (32%), Gaps = 3/115 (2%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPV 61
+L + +S++LH + + LL + L + + E
Sbjct: 10 KLNRAVIVSVVLHFVLIALLIWG---SLQENVDMNSAGGGGEGSVVGAVMVDPGAVVEQY 66
Query: 62 VQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALL 116
+ + S + + Q+ ++ +++ + + + K +E A
Sbjct: 67 NRQQQQSNDAQRAEKQRQKKAEQQAEELQQKQAAEQQRLKELEKERLTAQEKAAQ 121
>gi|24666721|ref|NP_649109.1| CG14087 [Drosophila melanogaster]
gi|7293798|gb|AAF49165.1| CG14087 [Drosophila melanogaster]
Length = 759
Score = 35.6 bits (80), Expect = 6.5, Method: Composition-based stats.
Identities = 23/184 (12%), Positives = 48/184 (26%), Gaps = 5/184 (2%)
Query: 25 FNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDR 84
F +LL + + + + + I E + + EN + E D
Sbjct: 354 FPPKLLELAQKPDFVEPEPWKSVLDEKIPIDNILEKEPEKETPFIENKPEKPVILEVKDI 413
Query: 85 FSDQTKTHATEN-----ETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQ 139
K + + + S+ Q L S + ++ +Q L+
Sbjct: 414 KPLPPKPEDEADIQGWLQQCSETISQQLQLLINEDSSSKTDSAEPEGIDFESEISKQQLK 473
Query: 140 GISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRF 199
E + + + + R+ + WN K
Sbjct: 474 PRVLGESNKKVSPESGWQNSFTVRLEDFEDIVDQNMTEFRDPQAKRIRSKWNKRFGLKSA 533
Query: 200 KKLR 203
+ LR
Sbjct: 534 ENLR 537
>gi|329295947|ref|ZP_08253283.1| cell envelope integrity inner membrane protein TolA [Plautia stali
symbiont]
Length = 378
Score = 35.6 bits (80), Expect = 6.6, Method: Composition-based stats.
Identities = 18/138 (13%), Positives = 44/138 (31%), Gaps = 11/138 (7%)
Query: 135 EQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIA-NWNIP 193
E D+ + + + + + +K S + ++ + +
Sbjct: 249 ESDVDDLLGGLSSGKNVPKSGAASGGGSAAGQGNQKKAGASGAEVNAYLGQITSAIQSRF 308
Query: 194 SDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSP 253
D ++ + +L G ++ V GG + + A++A P
Sbjct: 309 YDADLYRGKSCDLRIKLAPDGLLID---VKAEGGDPALCQAAITAAKQA-----RIPKPP 360
Query: 254 ST--YKSWRNITLFFVPS 269
S Y+ ++N + F P
Sbjct: 361 SQAVYEVFKNAPMRFKPE 378
Score = 35.6 bits (80), Expect = 6.9, Method: Composition-based stats.
Identities = 14/96 (14%), Positives = 38/96 (39%), Gaps = 1/96 (1%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPV 61
+L+ + IS+ILH++ + LL ++ + + +D + + + + +
Sbjct: 10 KLKRAIIISVILHIVLIALLIWSSFNEHIEASGGGGGSDIDAVMVDPG-AVVEQYNRQQN 68
Query: 62 VQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENE 97
Q E + + + + ++Q + E E
Sbjct: 69 QQSDSQRAEQQRQKQAEELQQKQAAEQQRLKELEKE 104
>gi|322374983|ref|ZP_08049497.1| pullulanase, extracellular [Streptococcus sp. C300]
gi|321280483|gb|EFX57522.1| pullulanase, extracellular [Streptococcus sp. C300]
Length = 1239
Score = 35.6 bits (80), Expect = 6.6, Method: Composition-based stats.
Identities = 13/140 (9%), Positives = 42/140 (30%)
Query: 10 SMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQ 69
S+++ +LL + + + + + + + + E P+ + K ++
Sbjct: 26 SVLIGASIILLSAAMPTISANENLPQTQENTSAMTQAPNETETSQTQKEMPISEQKNANA 85
Query: 70 ENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKIS 129
+ + + KT S K + + + P + ++
Sbjct: 86 SLDSKKEAPAVETTTAPETPKTEDATASQPNSKEEKVDTSTSTPNSDQKPQADTSSEEPI 145
Query: 130 KATNKEQDLQGISFAEKKSI 149
+ ++ + K S
Sbjct: 146 EDNYFRIHVKKLPEENKDSQ 165
>gi|301761021|ref|XP_002916039.1| PREDICTED: bromodomain adjacent to zinc finger domain protein
2A-like [Ailuropoda melanoleuca]
Length = 1917
Score = 35.6 bits (80), Expect = 6.6, Method: Composition-based stats.
Identities = 26/182 (14%), Positives = 51/182 (28%), Gaps = 8/182 (4%)
Query: 27 VQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENG-DRF 85
P+++ I S P V S +L V
Sbjct: 400 SDFPPPLTQPASDQSSTIQLHPATSPAVPPTASPAVSLAVSPAASLEISPEVSPVASPAV 459
Query: 86 SDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAE 145
S + + S + S+ + + SP K+S A + L S A+
Sbjct: 460 SPEISPVISPAAFPAVSPTSSAAFPPVSSEVSLTGSPVTSPKVSPAASPVAVLPTASPAD 519
Query: 146 KKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVK 205
K D +E+ + +S ++R R+ + + + V+
Sbjct: 520 KDVSTFPETTTDLEEITGEGVTTSGSG-------DVLRRRIATPEEVRLPLQHGWRREVR 572
Query: 206 MH 207
+
Sbjct: 573 IK 574
>gi|119510184|ref|ZP_01629322.1| hypothetical protein N9414_10378 [Nodularia spumigena CCY9414]
gi|119465134|gb|EAW46033.1| hypothetical protein N9414_10378 [Nodularia spumigena CCY9414]
Length = 420
Score = 35.6 bits (80), Expect = 6.6, Method: Composition-based stats.
Identities = 15/116 (12%), Positives = 30/116 (25%)
Query: 8 AISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGS 67
S+ LH++ L+ + Q P + + ++ I K E S
Sbjct: 50 ISSVSLHLLVFWLMRSSHVFQPWFPEQSQTFVPIEFIEVSPPEELPDKSNLEAETVSPKS 109
Query: 68 SQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPY 123
S + + + + S + E +K S
Sbjct: 110 SISPQQETSAPSPQIPAPTTPSNQDTETINSDASVLRESESQIKASQPNTQLFPKK 165
>gi|326787396|dbj|BAK08448.1| putative papain-like cysteine prorease [Plasmodium hylobati]
Length = 1280
Score = 35.6 bits (80), Expect = 6.7, Method: Composition-based stats.
Identities = 11/123 (8%), Positives = 23/123 (18%), Gaps = 1/123 (0%)
Query: 28 QLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSD 87
PI + ++ + + E P Q E Q
Sbjct: 107 PTDQPIEQPIEQPIEQPIEQPTDQPIEQPTEHPTDQPIEQPIEQPTDQPIEQSTEQPIEQ 166
Query: 88 QTKTH-ATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEK 146
T+ + P + + A +++ K
Sbjct: 167 STEQPIEQPTDLPADHPEDKPADQPTDETFTQPTVEVSNKAAAAAVRNPNEIEAKCSQLK 226
Query: 147 KSI 149
Sbjct: 227 DQD 229
>gi|291287016|ref|YP_003503832.1| hypothetical protein Dacet_1104 [Denitrovibrio acetiphilus DSM
12809]
gi|290884176|gb|ADD67876.1| hypothetical protein Dacet_1104 [Denitrovibrio acetiphilus DSM
12809]
Length = 238
Score = 35.6 bits (80), Expect = 6.7, Method: Composition-based stats.
Identities = 22/176 (12%), Positives = 48/176 (27%), Gaps = 3/176 (1%)
Query: 1 MRLENGLAISMILHVMFLLLL-YFNFNVQLLVPISRREML--SVDNIYNEDYHSSKYKKI 57
+R L ISM++H + L + F+ ++ I E++ S+ + + +
Sbjct: 3 LRFLPALLISMLVHFLILGAVPGFDLILKPRKRIVDVEIITSSIRELPPAPVQKTGSSAV 62
Query: 58 EEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLR 117
+ + ++ V D + + D K ++S L
Sbjct: 63 SKNAETNEATAPALTVPDIDIPDIADTKELDVKIPDLNVTRLENTSRLKPDKELLKELKS 122
Query: 118 MPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRI 173
K + + S + I + K S
Sbjct: 123 TSDEFQKANKPGEGIQSDVTGTDASARDFFVIKNLNRNRKLTNTPDKPTFSLTADT 178
>gi|296103331|ref|YP_003613477.1| cell envelope integrity inner membrane protein TolA [Enterobacter
cloacae subsp. cloacae ATCC 13047]
gi|295057790|gb|ADF62528.1| cell envelope integrity inner membrane protein TolA [Enterobacter
cloacae subsp. cloacae ATCC 13047]
Length = 246
Score = 35.6 bits (80), Expect = 6.8, Method: Composition-based stats.
Identities = 12/99 (12%), Positives = 33/99 (33%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPV 61
+L+ + +S +LHV+ L ++ + + S+D + + + ++
Sbjct: 10 KLKRAIIVSAVLHVILFAGLIWSSFDEHIDASGGGGGSSIDAVMVDPGAVVQNYNRQQQQ 69
Query: 62 VQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKR 100
++E + Q R + + K
Sbjct: 70 QASAKRAEEQREKQAQQQAEELREKQAAEQERLKQLEKE 108
>gi|258575223|ref|XP_002541793.1| predicted protein [Uncinocarpus reesii 1704]
gi|237902059|gb|EEP76460.1| predicted protein [Uncinocarpus reesii 1704]
Length = 621
Score = 35.6 bits (80), Expect = 6.8, Method: Composition-based stats.
Identities = 15/126 (11%), Positives = 35/126 (27%), Gaps = 1/126 (0%)
Query: 26 NVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRF 85
E + D I + + K+ + + S ++ D V + R
Sbjct: 87 PFLDFTLDPDFEAIEEDLIGDIPTMEVREKRKSIDGKEEEESGKKRKESDEKVAKKPGRK 146
Query: 86 SDQTKTHATENETKRSSSSK-GEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFA 144
++ + R++ E+ K L V +K + I
Sbjct: 147 PLTSEPTSKRKAQNRAAQRAFRERKEKHLKDLETKVEDLEKASQAANNENTLLRAQIERL 206
Query: 145 EKKSID 150
+ + +
Sbjct: 207 QVELRE 212
>gi|119485185|ref|ZP_01619570.1| hypothetical protein L8106_07044 [Lyngbya sp. PCC 8106]
gi|119457413|gb|EAW38538.1| hypothetical protein L8106_07044 [Lyngbya sp. PCC 8106]
Length = 1015
Score = 35.6 bits (80), Expect = 6.8, Method: Composition-based stats.
Identities = 14/188 (7%), Positives = 45/188 (23%), Gaps = 1/188 (0%)
Query: 25 FNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDR 84
F P + E E KIE ++ + ++G
Sbjct: 677 FPWPEKPPQTTDEAEDEAEDKPEVETPEPTDKIEPSPEDQPEETETITNVEQPPTKSGLD 736
Query: 85 FSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFA 144
+T E + + +Q + + ++ P + ++ S
Sbjct: 737 VISTEETAVIEPPSTSVKHQEFDQKIPSAETVQTTSQPNISSPKIEQPKSVHKVEIFSIE 796
Query: 145 EKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRV 204
+ ++ +++ ++ + + + + +
Sbjct: 797 SPQLVEEPSKASTSAPETLSEDETQSNIAATKFNLGQ-SETIEQLAVVDEGLPKLPEGYG 855
Query: 205 KMHFQLNQ 212
+ L
Sbjct: 856 ETKIVLLP 863
>gi|22125929|ref|NP_669352.1| transport protein TonB [Yersinia pestis KIM 10]
gi|45441793|ref|NP_993332.1| transport protein TonB [Yersinia pestis biovar Microtus str. 91001]
gi|108807547|ref|YP_651463.1| transport protein TonB [Yersinia pestis Antiqua]
gi|108811823|ref|YP_647590.1| transport protein TonB [Yersinia pestis Nepal516]
gi|145598238|ref|YP_001162314.1| transport protein TonB [Yersinia pestis Pestoides F]
gi|149365886|ref|ZP_01887921.1| TonB protein [Yersinia pestis CA88-4125]
gi|162419591|ref|YP_001606600.1| transport protein TonB [Yersinia pestis Angola]
gi|165927446|ref|ZP_02223278.1| TonB protein [Yersinia pestis biovar Orientalis str. F1991016]
gi|165938153|ref|ZP_02226712.1| TonB protein [Yersinia pestis biovar Orientalis str. IP275]
gi|166009185|ref|ZP_02230083.1| TonB protein [Yersinia pestis biovar Antiqua str. E1979001]
gi|166210978|ref|ZP_02237013.1| TonB protein [Yersinia pestis biovar Antiqua str. B42003004]
gi|167400764|ref|ZP_02306270.1| TonB protein [Yersinia pestis biovar Antiqua str. UG05-0454]
gi|167420427|ref|ZP_02312180.1| TonB protein [Yersinia pestis biovar Orientalis str. MG05-1020]
gi|167424895|ref|ZP_02316648.1| TonB protein [Yersinia pestis biovar Mediaevalis str. K1973002]
gi|218929291|ref|YP_002347166.1| transport protein TonB [Yersinia pestis CO92]
gi|229894872|ref|ZP_04510051.1| TonB protein [Yersinia pestis Pestoides A]
gi|229897618|ref|ZP_04512774.1| TonB protein [Yersinia pestis biovar Orientalis str. PEXU2]
gi|229898263|ref|ZP_04513410.1| TonB protein [Yersinia pestis biovar Orientalis str. India 195]
gi|229902122|ref|ZP_04517243.1| TonB protein [Yersinia pestis Nepal516]
gi|270490599|ref|ZP_06207673.1| TonB-dependent receptor [Yersinia pestis KIM D27]
gi|294503766|ref|YP_003567828.1| TonB protein [Yersinia pestis Z176003]
gi|21958868|gb|AAM85603.1|AE013806_7 energy transducer [Yersinia pestis KIM 10]
gi|45436655|gb|AAS62209.1| TonB protein [Yersinia pestis biovar Microtus str. 91001]
gi|108775471|gb|ABG17990.1| TonB protein [Yersinia pestis Nepal516]
gi|108779460|gb|ABG13518.1| TonB protein [Yersinia pestis Antiqua]
gi|115347902|emb|CAL20823.1| TonB protein [Yersinia pestis CO92]
gi|145209934|gb|ABP39341.1| TonB protein [Yersinia pestis Pestoides F]
gi|149292299|gb|EDM42373.1| TonB protein [Yersinia pestis CA88-4125]
gi|162352406|gb|ABX86354.1| TonB protein [Yersinia pestis Angola]
gi|165913814|gb|EDR32432.1| TonB protein [Yersinia pestis biovar Orientalis str. IP275]
gi|165920712|gb|EDR37960.1| TonB protein [Yersinia pestis biovar Orientalis str. F1991016]
gi|165991740|gb|EDR44041.1| TonB protein [Yersinia pestis biovar Antiqua str. E1979001]
gi|166208158|gb|EDR52638.1| TonB protein [Yersinia pestis biovar Antiqua str. B42003004]
gi|166962122|gb|EDR58143.1| TonB protein [Yersinia pestis biovar Orientalis str. MG05-1020]
gi|167049617|gb|EDR61025.1| TonB protein [Yersinia pestis biovar Antiqua str. UG05-0454]
gi|167056082|gb|EDR65860.1| TonB protein [Yersinia pestis biovar Mediaevalis str. K1973002]
gi|229681018|gb|EEO77113.1| TonB protein [Yersinia pestis Nepal516]
gi|229688553|gb|EEO80622.1| TonB protein [Yersinia pestis biovar Orientalis str. India 195]
gi|229693955|gb|EEO84004.1| TonB protein [Yersinia pestis biovar Orientalis str. PEXU2]
gi|229702165|gb|EEO90185.1| TonB protein [Yersinia pestis Pestoides A]
gi|262362114|gb|ACY58835.1| TonB protein [Yersinia pestis D106004]
gi|262365748|gb|ACY62305.1| TonB protein [Yersinia pestis D182038]
gi|270339103|gb|EFA49880.1| TonB-dependent receptor [Yersinia pestis KIM D27]
gi|294354225|gb|ADE64566.1| TonB protein [Yersinia pestis Z176003]
gi|320014856|gb|ADV98427.1| TonB protein [Yersinia pestis biovar Medievalis str. Harbin 35]
Length = 252
Score = 35.6 bits (80), Expect = 6.8, Method: Composition-based stats.
Identities = 24/193 (12%), Positives = 48/193 (24%), Gaps = 1/193 (0%)
Query: 2 RLENGLAISMILHVMFL-LLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP 60
RL L S+ LH + LLY + + P L+V + ++ + +
Sbjct: 11 RLTWSLIFSIGLHGSVVAALLYVSVEQMKIQPEIEDTPLAVTMVNIAEFAAPQPAAAAPE 70
Query: 61 VVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPV 120
VQ + E + K ++ K
Sbjct: 71 PVQETPAVPEETPPVLEETPPEPEELPEPVPVPVPEPVKPKPKPVKKEVKKPEVKKTQAP 130
Query: 121 SPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIA 180
K +A + S + K +K +R +
Sbjct: 131 PDDKPFKSDEAALVANNAPVKSAPVASTPGLSTSAGPKALSKAKPSYPARALALGIEGQV 190
Query: 181 IVRNRVIANWNIP 193
V+ + + +
Sbjct: 191 KVQYDIDESGRVT 203
>gi|327269318|ref|XP_003219441.1| PREDICTED: arf-GAP with SH3 domain, ANK repeat and PH
domain-containing protein 1-like [Anolis carolinensis]
Length = 1112
Score = 35.6 bits (80), Expect = 6.8, Method: Composition-based stats.
Identities = 9/119 (7%), Positives = 26/119 (21%), Gaps = 5/119 (4%)
Query: 41 VDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQEN-----GDRFSDQTKTHATE 95
+D K + Q + + +
Sbjct: 911 IDLPQKPQSGDLPPKPQALELPQKPQIGDLPPKPGELPPKPQLGDLPPKPQLADLPPKPQ 970
Query: 96 NETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVV 154
+ G+ K + P + + S + + +Q +K++ +
Sbjct: 971 MKDLPPKPQLGDALAKTPGEISPKPQPSEANQKSHSLDLSPKVQSKETVQKQTSEDSND 1029
>gi|325088777|gb|EGC42087.1| DNA-binding protein [Ajellomyces capsulatus H88]
Length = 691
Score = 35.6 bits (80), Expect = 6.9, Method: Composition-based stats.
Identities = 23/152 (15%), Positives = 54/152 (35%), Gaps = 4/152 (2%)
Query: 40 SVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRD----FSVQENGDRFSDQTKTHATE 95
S+D I E P ++ ++ + + F Q + + +T+
Sbjct: 42 SLDEIKASSTTQPGADPDEPPALKPGEEARSLVCNECGKRFRSQAQAEFHASKTEHVDFA 101
Query: 96 NETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVR 155
T+ + + + LR ++ Q+ + ++ + I K + +
Sbjct: 102 ESTEEIAPLTEVEKEAKLEELRQKLAAKKAQRSEQDKIDQKRNEEIRKKSTKEVQDIKEA 161
Query: 156 PDKKELLSKVEKSSRKRIPSQDAIAIVRNRVI 187
KKE L + K R++ +A A +R ++
Sbjct: 162 LQKKEQLKEAAKKRREKQEEIEAKARIRAKIE 193
>gi|188583837|ref|YP_001927282.1| TonB family protein [Methylobacterium populi BJ001]
gi|179347335|gb|ACB82747.1| TonB family protein [Methylobacterium populi BJ001]
Length = 289
Score = 35.6 bits (80), Expect = 6.9, Method: Composition-based stats.
Identities = 28/260 (10%), Positives = 61/260 (23%), Gaps = 11/260 (4%)
Query: 8 AISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGS 67
+++ LHV L L P+ + +D S+ E
Sbjct: 39 LLTLGLHVGLYLALTRETE-PPPAPVELPAAVMIDMSPEPTVVKSEVDNASEGPPAADAQ 97
Query: 68 SQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQK 127
E + + + + +Q +K+ ++
Sbjct: 98 QVEPEPEEAPPPPDPEPVVEAPPPPPEVKPQAVLPPKPPKQEVKKPEPKPPEKKVEKEKP 157
Query: 128 ISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVI 187
K++ + D + ++ + +R R++
Sbjct: 158 KKPVRKKDKPIMASRSGGGPRSDQQTA----NRTAASSAGAAVSQASRATWQNEMRARIV 213
Query: 188 ANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQ 247
P + V + G V + G L A + ++
Sbjct: 214 RAKRFPPGAFGAVGVAVV-SVTFSGTGSVSSARLIASSGNA-----ALDAEAVAVMYRAA 267
Query: 248 AFRLSPSTYKSWRNITLFFV 267
F P + I L F
Sbjct: 268 PFPPPPGGQAVTQTIPLNFN 287
>gi|120437233|ref|YP_862919.1| hypothetical protein GFO_2900 [Gramella forsetii KT0803]
gi|117579383|emb|CAL67852.1| conserved hypothetical protein [Gramella forsetii KT0803]
Length = 274
Score = 35.6 bits (80), Expect = 6.9, Method: Composition-based stats.
Identities = 31/245 (12%), Positives = 66/245 (26%), Gaps = 8/245 (3%)
Query: 4 ENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSV---DNIYNEDYHSSKYKKIEEP 60
+ L I++ +HV+ +LLL F L P ++ + + K +
Sbjct: 10 KKSLTITVAIHVVLILLLIFFGLTYLDPPPESGIAINFGTSEVGSGNEQPKEPVKSAPKQ 69
Query: 61 VVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPV 120
S+ + ++ Q+ + + K + E P
Sbjct: 70 STAQPVKSEPVIEKEVVTQDIEEAPVIEKKKKKPTPVETKQPEPPKEDPKPVKKPEPKPD 129
Query: 121 SPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIA 180
+ S E+ ++ PD S +
Sbjct: 130 KSTNDALSSILNGPERSGTANGGEGNDNVAGDKGSPDGDPNASSYYGQGSGLDGDGNYRL 189
Query: 181 IVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENAR 240
R + + + V + ++Q G V+ + GT L A+
Sbjct: 190 GGRKALNKEKFVQDC---NESGIVVVKIVVDQSGRVVSAQ--PGMKGTTNSASCLTGPAK 244
Query: 241 KAVIK 245
+A +
Sbjct: 245 RAALA 249
>gi|134294845|ref|YP_001118580.1| TonB family protein [Burkholderia vietnamiensis G4]
gi|134138002|gb|ABO53745.1| Cell division and transport-associated protein TolA [Burkholderia
vietnamiensis G4]
Length = 355
Score = 35.6 bits (80), Expect = 6.9, Method: Composition-based stats.
Identities = 18/135 (13%), Positives = 35/135 (25%), Gaps = 9/135 (6%)
Query: 136 QDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSD 195
+ A+ + + + S S S VR RV N
Sbjct: 230 DRERNARLAQLQGLAGAGDGGGQGLAKSGTGTGSGGNAASPGYADKVRRRVKPN---IVW 286
Query: 196 FKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPST 255
L + + G +L G + + A+ S
Sbjct: 287 GGERAGLTTVVKIRCTPSGDLLSVSVARPSGNSGW-----DQAVVSAIQASVPLPPDTDG 341
Query: 256 YKSWRNITLFFVPSK 270
++ +IT+ F ++
Sbjct: 342 -RTPSSITITFKAAE 355
>gi|281600676|gb|ADA73660.1| Energy transducing membrane protein tonb [Shigella flexneri
2002017]
Length = 256
Score = 35.6 bits (80), Expect = 7.0, Method: Composition-based stats.
Identities = 18/225 (8%), Positives = 51/225 (22%), Gaps = 20/225 (8%)
Query: 8 AISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGS 67
+S+ +H + L + Q++ + + +SV + D + + V
Sbjct: 31 LLSVCIHGAVVAGLLYTSVHQVIELPAPAQPISVTMVAPADLEPPQAVQPPPEPVVEPEP 90
Query: 68 SQ--------------ENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKES 113
E + + + + R +S A
Sbjct: 91 EPEPIPEPPKEAPVVIEKPKPKPKPKPKPVKKVQEQPKRDVKPVESRPASPFENTAPARP 150
Query: 114 ALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRI 173
+ + + + + + + K ++ + +I
Sbjct: 151 TSSTATAATSKPVTSVASGPRALSRNQPQYPARAQALRIEGQVKVKFDVTPDGRVDNVQI 210
Query: 174 PSQDAIAIVRNRVI---ANWNIPSDFKRFKKLRVKMHFQLNQKGF 215
S + V W + ++ G
Sbjct: 211 LSAKPANMFEREVKNAMRRWRYEPGKPGSG---IVVNILFKINGT 252
>gi|320181691|gb|EFW56602.1| Ferric siderophore transport system, periplasmic binding protein
TonB [Shigella boydii ATCC 9905]
Length = 246
Score = 35.6 bits (80), Expect = 7.1, Method: Composition-based stats.
Identities = 18/225 (8%), Positives = 51/225 (22%), Gaps = 20/225 (8%)
Query: 8 AISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGS 67
+S+ +H + L + Q++ + + +SV + D + + V
Sbjct: 21 LLSVCIHGAVVAGLLYTSVHQVIELPAPAQPISVTMVAPADLEPPQAVQPPPEPVVEPEP 80
Query: 68 SQ--------------ENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKES 113
E + + + + R +S A
Sbjct: 81 EPEPIPEPPKEAPVVIEKPKPKPKPKPKPVKKVQEQPKRDVKPVESRPASPFENTAPARP 140
Query: 114 ALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRI 173
+ + + + + + + K ++ + +I
Sbjct: 141 TSSTATAATSKPVTSVASGPRALSRNQPQYPARAQALRIEGQVKVKFDVTPDGRVDNVQI 200
Query: 174 PSQDAIAIVRNRVI---ANWNIPSDFKRFKKLRVKMHFQLNQKGF 215
S + V W + ++ G
Sbjct: 201 LSAKPANMFEREVKNAMRRWRYEPGKPGSG---IVVNILFKINGT 242
>gi|315615903|gb|EFU96529.1| protein tonB [Escherichia coli 3431]
Length = 239
Score = 35.6 bits (80), Expect = 7.1, Method: Composition-based stats.
Identities = 18/225 (8%), Positives = 51/225 (22%), Gaps = 20/225 (8%)
Query: 8 AISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGS 67
+S+ +H + L + Q++ + + +SV + D + + V
Sbjct: 14 LLSVCIHGAVVAGLLYTSVHQVIELPAPAQPISVTMVTPADLEPPQAVQPPPAPVVEPEP 73
Query: 68 SQ--------------ENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKES 113
E + + + + R +S A
Sbjct: 74 EPEPIPEPPKEAPVVIEKPKPKPKPKPKPVKKVQEQPKRDVKPVESRPASPFENTAPARP 133
Query: 114 ALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRI 173
+ + + + + + + K ++ + +I
Sbjct: 134 TSSTATAATSKPVTSVASGPRALSRNQPQYPARAQALRIEGQVKVKFDVTPDGRVDNVQI 193
Query: 174 PSQDAIAIVRNRVI---ANWNIPSDFKRFKKLRVKMHFQLNQKGF 215
S + V W + ++ G
Sbjct: 194 LSAKPANMFEREVKNAMRRWRYEPGKPGSG---IVVNILFKINGT 235
>gi|217962306|ref|YP_002340876.1| S-layer domain protein [Bacillus cereus AH187]
gi|217063535|gb|ACJ77785.1| S-layer domain protein [Bacillus cereus AH187]
Length = 914
Score = 35.6 bits (80), Expect = 7.1, Method: Composition-based stats.
Identities = 16/167 (9%), Positives = 43/167 (25%), Gaps = 15/167 (8%)
Query: 9 ISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSS 68
S+I L F E+ + + K
Sbjct: 5 YSVIAVASLLATNLLTFPSS-------------SLAEIENKTRNSIEAFSYIQSNEKSEL 51
Query: 69 QENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK--Q 126
Q+ L Q ++ + K K ++ LK+ ++ + +
Sbjct: 52 QQQLEAVKERQIELEKREEILKQQKELFVKVDELKRKKDELLKQDGEQKVQLEEVQQELD 111
Query: 127 KISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRI 173
++ K + ++ + + ++E+ K ++
Sbjct: 112 ELKKMQAEIEEQNQLQVRDNSEEKKTTELKKQEEIEEKNALEIKENN 158
>gi|149192086|ref|ZP_01870310.1| tolA protein [Vibrio shilonii AK1]
gi|148834072|gb|EDL51085.1| tolA protein [Vibrio shilonii AK1]
Length = 340
Score = 35.6 bits (80), Expect = 7.1, Method: Composition-based stats.
Identities = 20/180 (11%), Positives = 62/180 (34%), Gaps = 3/180 (1%)
Query: 5 NGLAISMILHVMFLLLLYFN--FNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVV 62
+AIS+ H+M ++ L + F + P + + +D K+ E
Sbjct: 13 KPIAISLFAHLMLVVALLWGTDFTMNKAEPTGMVQAVVIDPARVRQQAQEIRKQRETAAK 72
Query: 63 QFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
+ + + L R+ E + ++ + + K + +++ + +E R +
Sbjct: 73 KEQDRL-DKLRRESEQLERNRKAEEERIRKLKQQQAKDAQAAREAEKRREVERQRAAKAE 131
Query: 123 YDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIV 182
+++ +A + + A + + ++ ++ + K + +
Sbjct: 132 AERKAKEEAVRVAEQQRVAKEAAIAKAEKERLEKERAIKEAQQKAQREKEAAERAEKERI 191
>gi|312213729|emb|CBX93731.1| hypothetical protein [Leptosphaeria maculans]
Length = 1480
Score = 35.6 bits (80), Expect = 7.1, Method: Composition-based stats.
Identities = 8/142 (5%), Positives = 32/142 (22%)
Query: 35 RREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHAT 94
V+ + ++++ Q E ++ ++ T
Sbjct: 745 PPPEDPVEVQKRLMADKIERARLKKQQEQEAEKKAEAERKERIAKKLAALGPPADSKSKT 804
Query: 95 ENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVV 154
+ ++ + + Q K + ++ K
Sbjct: 805 KEQSPSRPAEQSPQKEKAVPAAVQSPPKPPVPTADGEVAQYGMMKVHQPHTVKKASPQTE 864
Query: 155 RPDKKELLSKVEKSSRKRIPSQ 176
+ + + S + ++
Sbjct: 865 PAKTVKPAEQAQGSLPVKTQTE 886
>gi|300951941|ref|ZP_07165743.1| gram-negative bacterial TonB protein [Escherichia coli MS 116-1]
gi|300955884|ref|ZP_07168221.1| gram-negative bacterial TonB protein [Escherichia coli MS 175-1]
gi|148023|gb|AAB59066.1| membrane protein (tonB) [Escherichia coli]
gi|902383|gb|AAB60069.1| membrane protein [Escherichia coli]
gi|902392|gb|AAB60077.1| membrane protein [Escherichia coli]
gi|902482|gb|AAB60157.1| membrane protein [Escherichia coli]
gi|260449617|gb|ACX40039.1| TonB family protein [Escherichia coli DH1]
gi|300317234|gb|EFJ67018.1| gram-negative bacterial TonB protein [Escherichia coli MS 175-1]
gi|300448834|gb|EFK12454.1| gram-negative bacterial TonB protein [Escherichia coli MS 116-1]
gi|323937750|gb|EGB34016.1| TonB family protein containing protein [Escherichia coli E1520]
gi|323942367|gb|EGB38537.1| TonB family protein domain-containing protein [Escherichia coli
E482]
Length = 244
Score = 35.6 bits (80), Expect = 7.1, Method: Composition-based stats.
Identities = 18/225 (8%), Positives = 51/225 (22%), Gaps = 20/225 (8%)
Query: 8 AISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGS 67
+S+ +H + L + Q++ + + +SV + D + + V
Sbjct: 19 LLSVCIHGAVVAGLLYTSVHQVIELPAPAQPISVTMVTPADLEPPQAVQPPPEPVVEPEP 78
Query: 68 SQ--------------ENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKES 113
E + + + + R +S A
Sbjct: 79 EPEPIPEPPKEAPVVIEKPKPKPKPKPKPVKKVQEQPKRDVKPVESRPASPFENTAPARL 138
Query: 114 ALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRI 173
+ + + + + + + K ++ + +I
Sbjct: 139 TSSTATAATSKPVTSVASGPRALSRNQPQYPARAQALRIEGQVKVKFDVTPDGRVDNVQI 198
Query: 174 PSQDAIAIVRNRVI---ANWNIPSDFKRFKKLRVKMHFQLNQKGF 215
S + V W + ++ G
Sbjct: 199 LSAKPANMFEREVKNAMRRWRYEPGKPGSG---IVVNILFKINGT 240
>gi|324006066|gb|EGB75285.1| gram-negative bacterial TonB protein [Escherichia coli MS 57-2]
Length = 251
Score = 35.6 bits (80), Expect = 7.2, Method: Composition-based stats.
Identities = 17/225 (7%), Positives = 52/225 (23%), Gaps = 20/225 (8%)
Query: 8 AISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKK----------- 56
+S+ +H + L + Q++ + + +SV + D + +
Sbjct: 26 LLSVCIHGAVVAGLLYTSVHQVIELPAPAQPISVTMVAPADLEPPQAVQPPPEPVVEPEP 85
Query: 57 ---IEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKES 113
+ + E + + + + R +S A
Sbjct: 86 EPELIPEPPKEAPVVIEKPKPKPKPKPKPVKKVQEQPKRDVKPVESRPASPFENTAPARP 145
Query: 114 ALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRI 173
+ + + + + + + K ++ + +I
Sbjct: 146 TSSTATAATSKPVTSVASGPRALSRNQPQYPARAQALRIEGQVKVKFDVTPDGRVDNVQI 205
Query: 174 PSQDAIAIVRNRVI---ANWNIPSDFKRFKKLRVKMHFQLNQKGF 215
S + V W + ++ G
Sbjct: 206 LSAKPANMFEREVKNAMRRWRYEPGKPGSG---IVVNILFKINGT 247
>gi|222872027|gb|EEF09158.1| predicted protein [Populus trichocarpa]
Length = 298
Score = 35.6 bits (80), Expect = 7.2, Method: Composition-based stats.
Identities = 28/224 (12%), Positives = 61/224 (27%), Gaps = 8/224 (3%)
Query: 47 EDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKG 106
+D ++ ++ Q + E +D + +E D+ E K
Sbjct: 83 KDRRDKLEQQKKDKAEQDRKDRLEQQKKDKAEKEKADKEKAARDKAEREKAEKADKEKAA 142
Query: 107 EQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVE 166
+ ++ A ++ +A E + + +
Sbjct: 143 KAEAEKKAAEDKRKKEQAAKEAREAKEAEARRLENIRRMQGLAGSGGSAGEGAGGSKSGG 202
Query: 167 KSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVG 226
S PS A V RV N P R ++ + G + G G
Sbjct: 203 SGSSAGGPSAGYGAKVAARVKPNIVYPDAISG--NPRAEVRVRTAPDGTITGATIAKSSG 260
Query: 227 GTELVRRMLRENARKAVIKSQAFRLSPSTYKSWRNITLFFVPSK 270
+ + +A+ K++ + ++ + F P
Sbjct: 261 N-----KAWDDAVIRALQKTETLPRDIDG-RVPSDLVIGFRPQD 298
>gi|198422406|ref|XP_002130969.1| PREDICTED: similar to RALBP1 associated Eps domain containing 1
[Ciona intestinalis]
Length = 757
Score = 35.6 bits (80), Expect = 7.2, Method: Composition-based stats.
Identities = 21/182 (11%), Positives = 52/182 (28%), Gaps = 1/182 (0%)
Query: 30 LVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQT 89
P R + + V S + + E + S E + ++ +
Sbjct: 568 PTPPPRPQTVPVTEPQESFADFSNFNQPHEEPEPIEKSDDEKKIEKKLEKKVEKKVEKIV 627
Query: 90 KTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSI 149
K K S+ + E K+ + + K ++ D+
Sbjct: 628 KPVPAPRPNKESAKIEEEIENKDIEEEKSTHNKKAPTKPPRSRIMSSDVCKPEPILSTLP 687
Query: 150 DTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQ 209
+ K + ++ ++ S + VRN + N + + ++ +
Sbjct: 688 ISSKDPKHKPQPKQELSRNKSSLQTSIREL-KVRNTQLTRLNADLQQQLKDVMESRITVE 746
Query: 210 LN 211
+N
Sbjct: 747 MN 748
>gi|168333513|ref|ZP_02691782.1| peptidase M23B [Epulopiscium sp. 'N.t. morphotype B']
Length = 465
Score = 35.6 bits (80), Expect = 7.2, Method: Composition-based stats.
Identities = 20/174 (11%), Positives = 49/174 (28%), Gaps = 9/174 (5%)
Query: 14 HVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLV 73
H++F+ L F L S N D + + V ++
Sbjct: 4 HLLFIGLFIFGLESFLFATTSDTPA-----TKNSDSTENTANASDVKVDSSVDNTAPATD 58
Query: 74 RDFSVQENGDRFSDQTKTHATENE----TKRSSSSKGEQALKESALLRMPVSPYDKQKIS 129
S N + T + E+ ++ + V+ K K
Sbjct: 59 NATSSDNNSTDVKVDSSTENAPKQTHSGPTAEQLKAREEEKRKFEEHQKQVAAELKIKKL 118
Query: 130 KATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVR 183
+ + + D++ ++ + + + L + + I D + ++
Sbjct: 119 ELESNQDDIEKTQQVIDINLQQQDLINAEIDQLDLQIITLEEEIKLLDEESRLK 172
>gi|320540540|ref|ZP_08040190.1| putative membrane spanning protein in TonB-ExbB-ExbD complex
[Serratia symbiotica str. Tucson]
gi|320029471|gb|EFW11500.1| putative membrane spanning protein in TonB-ExbB-ExbD complex
[Serratia symbiotica str. Tucson]
Length = 231
Score = 35.6 bits (80), Expect = 7.2, Method: Composition-based stats.
Identities = 30/218 (13%), Positives = 59/218 (27%), Gaps = 11/218 (5%)
Query: 2 RLENGLAISMILH-VMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP 60
RL + +S+ LH + L + + +P S +SV + + EP
Sbjct: 11 RLSVPIVMSVGLHCALVAGLFCASAKEVMELPKSEDASISVMMVNIAPTAEPPAQSEPEP 70
Query: 61 VVQFKGSSQENLVRDFS-------VQENGDRFSDQTKTHATENETKRSSSSKGEQALKES 113
+ + + + E +S E
Sbjct: 71 PQVEPEPELMPEPLPKAMLKPQPIKPRPKPKPKVEKQIKPKPEEAGLHETSLSENHAPAK 130
Query: 114 ALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRI 173
++ +PV + K ++ L + +V V+ D
Sbjct: 131 SISPVPVQGNSRDAEQKPISRVDPLYPPRARALQIEGSVRVQFDIDSNGLVTNVRILSAE 190
Query: 174 PSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLN 211
P V+ + W K K V + F++N
Sbjct: 191 PRNIFEREVKQAL-RKWRYE--AKEAKDRVVNIRFKMN 225
>gi|308049999|ref|YP_003913565.1| Cell division and transport-associated protein TolA [Ferrimonas
balearica DSM 9799]
gi|307632189|gb|ADN76491.1| Cell division and transport-associated protein TolA [Ferrimonas
balearica DSM 9799]
Length = 308
Score = 35.6 bits (80), Expect = 7.2, Method: Composition-based stats.
Identities = 25/284 (8%), Positives = 72/284 (25%), Gaps = 45/284 (15%)
Query: 23 FNFNVQLLVPISRREMLSVDNIYNEDYHSSKY-----KKIEEPVVQFKGSSQENLVRDFS 77
+ + + V D + + + + + Q +L R
Sbjct: 32 VSVDFSSKPKPQPQASAPVVQAVTVDKAQVEQHVKRIQAEQAAAREAERQRQADLERQAK 91
Query: 78 VQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQD 137
E + + +R + K + + A ++ ++ ++ KE+
Sbjct: 92 EAERKRQAEQDRLRKLEQERQQRQAEVKRAEEAAKQAKIKQQEEEKRARQAAEQRAKEEA 151
Query: 138 LQGISFAEKKSIDTV--------------------------------VVRPDKKELLSKV 165
+ + ++K+ + + ++
Sbjct: 152 ARQEAERKRKAEEEAARKAEAERKRKEEERKRKEAEEAARKAREAELAAQMAAEQAELAQ 211
Query: 166 EKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVV 225
+ + + ++R + N + + + ++ L GFV +
Sbjct: 212 ARQQQVLTEVERYSVLIRQVIQRNLRTDTSMRGKQ---CRVRINLAPDGFVFDSRVLSGD 268
Query: 226 GGTELVRRMLRENARKAVIKSQAFRLSPSTYKSWRNITLFFVPS 269
G + + A + P Y + I L P
Sbjct: 269 PGVCRATQAAIQAAGQL-----PVSKEPDVYNQLKQIDLTVEPE 307
>gi|269103009|ref|ZP_06155706.1| TolA protein [Photobacterium damselae subsp. damselae CIP 102761]
gi|268162907|gb|EEZ41403.1| TolA protein [Photobacterium damselae subsp. damselae CIP 102761]
Length = 331
Score = 35.6 bits (80), Expect = 7.2, Method: Composition-based stats.
Identities = 32/203 (15%), Positives = 71/203 (34%), Gaps = 12/203 (5%)
Query: 69 QENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKI 128
QE + +++ + + A + E R + ++ +E+A L +++
Sbjct: 138 QEAAEKAEQLRQQKVAEQRKAEEAAKKAEADRKAKEAAKKKAEEAAKLAEQKRIEAEKQR 197
Query: 129 SKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIA 188
++ K + + ++ ++D + + + K +Q AI + +
Sbjct: 198 KESERKAAEAKAKQQQQEAALDNIFDGLEAETQQRGGAKGQFIADETQRYGAIYKQMIQQ 257
Query: 189 NWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQA 248
N F + + +L+ G +L V L A+ AV+K
Sbjct: 258 NLLTDQSFIGKQ---CVLSMRLSANGLLLNVDQV-------SGDNTLCRAAKAAVVKISQ 307
Query: 249 FRLS--PSTYKSWRNITLFFVPS 269
F + P+ + RNI L P
Sbjct: 308 FPMPEDPAVIEKLRNIKLTVSPQ 330
>gi|172059755|ref|YP_001807407.1| protein TolA [Burkholderia ambifaria MC40-6]
gi|171992272|gb|ACB63191.1| protein TolA [Burkholderia ambifaria MC40-6]
Length = 355
Score = 35.6 bits (80), Expect = 7.2, Method: Composition-based stats.
Identities = 26/217 (11%), Positives = 57/217 (26%), Gaps = 9/217 (4%)
Query: 54 YKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKES 113
+ ++ + K + + + Q + E ++ + +A ES
Sbjct: 148 ERDKQKQADKLKQQQLVEQQKLEQQKAQQQKQQQQKQAQLEAQEAAKAKADAAAKAKAES 207
Query: 114 ALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRI 173
+ + + A K + A+ + + + S S
Sbjct: 208 QAKAKAEAAARAKADAAAKAKLDRERNARLAQMQGLAGAGEGGGQGLAKSGTGTGSGGNA 267
Query: 174 PSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRR 233
S VR RV N L + + G +L G +
Sbjct: 268 ASPGYADKVRRRVKPN---IVWGGERAGLTTIVKIRCTPSGDLLSVSVSRPSGNSGW--- 321
Query: 234 MLRENARKAVIKSQAFRLSPSTYKSWRNITLFFVPSK 270
+ A+ S + +IT+ F ++
Sbjct: 322 --DQAVVNAIQASVPLPPDTDG-HTPSSITITFKAAE 355
>gi|94264749|ref|ZP_01288528.1| TonB-like [delta proteobacterium MLMS-1]
gi|93454795|gb|EAT05048.1| TonB-like [delta proteobacterium MLMS-1]
Length = 281
Score = 35.6 bits (80), Expect = 7.2, Method: Composition-based stats.
Identities = 24/257 (9%), Positives = 60/257 (23%), Gaps = 21/257 (8%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPI-SRREMLSVDN--------IYNEDYHSS 52
R+ L +++I H + +++ + P R L ++ S
Sbjct: 3 RMLPALFLALIGHALLFWWGS-DWSWRSAPPPGGRPLTLQLELGAASPPPAPAETPATSE 61
Query: 53 KYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKE 112
+ V + + +
Sbjct: 62 APAAPATETAAQPEQPPKPEPEPTPVPPAEPEPEPEPEPEPEPEPEPEPEPEPKPETEPV 121
Query: 113 SALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKR 172
+ + E + RP + + ++S
Sbjct: 122 PGKSKKATPAASTPAPPPTVESSPAAGATAANEAPATAPAPTRPQDTDQAATGGEASTPA 181
Query: 173 IPSQDAIAIV---RNRVIANWNIPSDFKRFK---KLRVKMHFQLNQKGFVLGKINVDVVG 226
++ + R N P + + V + +++++G V + G
Sbjct: 182 AAEEELAGEIIEARPLYRENPPPPYPPAARQRHYQGTVMLAVEVDEQGRVSQLQVAESSG 241
Query: 227 GTELVRRMLRENARKAV 243
+L A +AV
Sbjct: 242 -----YPLLDRAAVRAV 253
>gi|281353276|gb|EFB28860.1| hypothetical protein PANDA_004097 [Ailuropoda melanoleuca]
Length = 1921
Score = 35.6 bits (80), Expect = 7.3, Method: Composition-based stats.
Identities = 26/182 (14%), Positives = 51/182 (28%), Gaps = 8/182 (4%)
Query: 27 VQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENG-DRF 85
P+++ I S P V S +L V
Sbjct: 404 SDFPPPLTQPASDQSSTIQLHPATSPAVPPTASPAVSLAVSPAASLEISPEVSPVASPAV 463
Query: 86 SDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAE 145
S + + S + S+ + + SP K+S A + L S A+
Sbjct: 464 SPEISPVISPAAFPAVSPTSSAAFPPVSSEVSLTGSPVTSPKVSPAASPVAVLPTASPAD 523
Query: 146 KKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVK 205
K D +E+ + +S ++R R+ + + + V+
Sbjct: 524 KDVSTFPETTTDLEEITGEGVTTSGSG-------DVLRRRIATPEEVRLPLQHGWRREVR 576
Query: 206 MH 207
+
Sbjct: 577 IK 578
>gi|222098287|ref|YP_002532344.1| s-layer-like domain protein [Bacillus cereus Q1]
gi|221242345|gb|ACM15055.1| S-layer-like domain protein [Bacillus cereus Q1]
Length = 913
Score = 35.6 bits (80), Expect = 7.3, Method: Composition-based stats.
Identities = 16/167 (9%), Positives = 43/167 (25%), Gaps = 15/167 (8%)
Query: 9 ISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSS 68
S+I L F E+ + + K
Sbjct: 4 YSVIAVASLLATNLLTFPSS-------------SLAEIENKTRNSIEAFSYIQSNEKSEL 50
Query: 69 QENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK--Q 126
Q+ L Q ++ + K K ++ LK+ ++ + +
Sbjct: 51 QQQLEAVKERQIELEKREEILKQQKELFVKVDELKRKKDELLKQDGEQKVQLEEVQQELD 110
Query: 127 KISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRI 173
++ K + ++ + + ++E+ K ++
Sbjct: 111 ELKKMQAEIEEQNQLQVRDNSEEKKTTELKKQEEIEEKNALEIKENN 157
>gi|217976800|ref|YP_002360947.1| TonB family protein [Methylocella silvestris BL2]
gi|217502176|gb|ACK49585.1| TonB family protein [Methylocella silvestris BL2]
Length = 495
Score = 35.6 bits (80), Expect = 7.3, Method: Composition-based stats.
Identities = 13/104 (12%), Positives = 27/104 (25%), Gaps = 6/104 (5%)
Query: 168 SSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKINVDVVG 226
+ IV + P + + + F L + G + + G
Sbjct: 395 PTEGGDEQMSYKVIVFGMLERAKQYPPAARERGARGSAVVSFTLEESGELANVSLMRSSG 454
Query: 227 GTELVRRMLRENARKAVIKSQAFRLSPSTYKSWRNITLFFVPSK 270
++L L V ++ F P + + F
Sbjct: 455 DSDLDIESLA-----LVARASPFPKPPEGAQRSFAAEITFDLRD 493
>gi|27819803|gb|AAO24950.1| RE53824p [Drosophila melanogaster]
Length = 1199
Score = 35.6 bits (80), Expect = 7.4, Method: Composition-based stats.
Identities = 14/151 (9%), Positives = 41/151 (27%)
Query: 39 LSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENET 98
+ V+ +E S +K + + L + E+ + + K
Sbjct: 714 VEVNEGASEPKPVSPGQKKQPRKKTTNKPNPALLQLERQRMEDMKKSDAKLKMKVMVKLK 773
Query: 99 KRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDK 158
+ + + E ++ K + + + + + + K
Sbjct: 774 RAEDEFEVARKWVEDMKQGQELATKIKDSKAATPSNKTQKPSENLKISEKGSSAKKESTK 833
Query: 159 KELLSKVEKSSRKRIPSQDAIAIVRNRVIAN 189
+ E + K A ++ ++ N
Sbjct: 834 QHGEGDKENTKNKEKIGDILKAAIKAKIGEN 864
>gi|24652859|ref|NP_725094.1| CG8290, isoform A [Drosophila melanogaster]
gi|21627426|gb|AAF58601.2| CG8290, isoform A [Drosophila melanogaster]
Length = 1199
Score = 35.6 bits (80), Expect = 7.4, Method: Composition-based stats.
Identities = 14/151 (9%), Positives = 41/151 (27%)
Query: 39 LSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENET 98
+ V+ +E S +K + + L + E+ + + K
Sbjct: 714 VEVNEGASEPKPVSPGQKKQPRKKTTNKPNPALLQLERQRMEDMKKSDAKLKMKVMVKLK 773
Query: 99 KRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDK 158
+ + + E ++ K + + + + + + K
Sbjct: 774 RAEDEFEVARKWVEDMKQGQELATKIKDSKAATPSNKTQKPSENLKISEKGSSAKKESTK 833
Query: 159 KELLSKVEKSSRKRIPSQDAIAIVRNRVIAN 189
+ E + K A ++ ++ N
Sbjct: 834 QHGEGDKENTKNKEKIGDILKAAIKAKIGEN 864
>gi|83768169|dbj|BAE58308.1| unnamed protein product [Aspergillus oryzae]
Length = 432
Score = 35.6 bits (80), Expect = 7.4, Method: Composition-based stats.
Identities = 12/95 (12%), Positives = 28/95 (29%)
Query: 28 QLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSD 87
+ P+ E++ +D E+ + + E + + +
Sbjct: 102 KTAPPVHTPEVVPIDLKNEEEPTEESPADSVPKPRKKYETMVEVRICSKTAAPKPQDIQE 161
Query: 88 QTKTHATENETKRSSSSKGEQALKESALLRMPVSP 122
+ + H + E + S + E R V P
Sbjct: 162 EQEQHVDQKEPQEDKRSAESERQGERRARRNKVPP 196
>gi|2393880|gb|AAB83959.1| A-kinase anchor protein DAKAP550 [Drosophila melanogaster]
Length = 2359
Score = 35.6 bits (80), Expect = 7.4, Method: Composition-based stats.
Identities = 17/173 (9%), Positives = 46/173 (26%), Gaps = 13/173 (7%)
Query: 29 LLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQ 88
L P + SV+ + + K E +E + +Q
Sbjct: 1474 LKKPEDPKGHSSVE-------------PKTPNLEEPKPQETEQQKSQEVAEELPQKPEEQ 1520
Query: 89 TKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKS 148
T+ + A +++ Q ++ + + + +
Sbjct: 1521 VVAIVTQVLDTLVDDTVKAVAAEQTTQTSPAPEEQSPQILAMESPATSVRVKPTEVDSTT 1580
Query: 149 IDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKK 201
T L+ +V++ ++ Q A + + +N + +
Sbjct: 1581 QTTPKNEAGSSLLVEQVQQVLQEDDAQQSAGMTIEDEDYSNQQAAAAVENANS 1633
>gi|306830131|ref|ZP_07463315.1| alpha-L-fucosidase FucA [Streptococcus mitis ATCC 6249]
gi|304427657|gb|EFM30753.1| alpha-L-fucosidase FucA [Streptococcus mitis ATCC 6249]
Length = 1996
Score = 35.6 bits (80), Expect = 7.5, Method: Composition-based stats.
Identities = 13/129 (10%), Positives = 43/129 (33%), Gaps = 6/129 (4%)
Query: 42 DNIYNEDYH--SSKYKKIEEPVVQFKGSSQENLVR-DFSVQENGDRFSDQTKTHATENET 98
+ D + + K +E V + ++ E + + + + E R + E
Sbjct: 1638 KLVEIADQAIAAIQEAKTQEAVNKALETALEQISKLEAAQPEKPARPKTPAQP---EKPA 1694
Query: 99 KRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDK 158
+ + ++ EQ + + + + + + + + + K
Sbjct: 1695 QPETPAQPEQPAQPEKPITSSSPEEGVKNLVFTLPSLEIVNKPVPFKTIRRENAQLDKGK 1754
Query: 159 KELLSKVEK 167
+++LS+ +
Sbjct: 1755 EQILSEGKD 1763
>gi|300722396|ref|YP_003711682.1| hypothetical protein XNC1_1419 [Xenorhabdus nematophila ATCC 19061]
gi|297628899|emb|CBJ89482.1| required for outer membrane integrity, uptake of group A colicins,
role in translocation of filamenous phage DNA to
cytoplasm, role in surface expression of O-antigen
[Xenorhabdus nematophila ATCC 19061]
Length = 314
Score = 35.6 bits (80), Expect = 7.5, Method: Composition-based stats.
Identities = 26/213 (12%), Positives = 61/213 (28%), Gaps = 12/213 (5%)
Query: 59 EPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRM 118
+ + + Q+ + E + + A ++ + +A E+
Sbjct: 112 RILQEQAEARQKAEAQAKKEAEEAVKRKAADEAKAEAEAKAKAVAEAKVKAETEAKEKAE 171
Query: 119 PVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDA 178
+ + +KA +Q + + +KS +
Sbjct: 172 VEAKAKTEAKAKAKAAKQAQDVNDLLGGLTSNAPKQGGATAAGKGGGKKSGVSESDINNY 231
Query: 179 IAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLREN 238
++ + N+ PS + + +L G + G + L
Sbjct: 232 KGQIQAAIQKNFRDPSLYIGR---TCDLKIKLASDGLL----IDIKAGAGDP---ALCRA 281
Query: 239 ARKAVIKSQAFRLSPST--YKSWRNITLFFVPS 269
A A ++ PS Y+ +++ TL F P
Sbjct: 282 ALTAANLTKKMPRPPSKEIYEHFKDFTLDFKPQ 314
>gi|255729914|ref|XP_002549882.1| hypothetical protein CTRG_04179 [Candida tropicalis MYA-3404]
gi|240132951|gb|EER32508.1| hypothetical protein CTRG_04179 [Candida tropicalis MYA-3404]
Length = 352
Score = 35.6 bits (80), Expect = 7.5, Method: Composition-based stats.
Identities = 13/136 (9%), Positives = 31/136 (22%)
Query: 26 NVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRF 85
+ LVP E +SV E + + PV + + + + +
Sbjct: 90 PIPELVPEPVEEPISVPEYIEEPEPQYEPEHEAVPVEEPVPAPIQVEESVPAPAPKPQKE 149
Query: 86 SDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAE 145
+ T + + + + E + +
Sbjct: 150 EEAIVIAKQVVITTSIPAETKAPVPEPQPEPQQQHDEPQPESQHDEPEPEHNEPEPQKTK 209
Query: 146 KKSIDTVVVRPDKKEL 161
+ + P E
Sbjct: 210 EVPHEVGSSLPAIAEE 225
>gi|302501969|ref|XP_003012976.1| MATH and UCH domain protein, putative [Arthroderma benhamiae CBS
112371]
gi|291176537|gb|EFE32336.1| MATH and UCH domain protein, putative [Arthroderma benhamiae CBS
112371]
Length = 1467
Score = 35.6 bits (80), Expect = 7.5, Method: Composition-based stats.
Identities = 24/188 (12%), Positives = 57/188 (30%), Gaps = 8/188 (4%)
Query: 22 YFNFNVQLLVPISRREMLSVDNIYNEDYH---SSKYKKIEEPVVQFKGSSQENLVRDFSV 78
YF+ + P E +++ ++ + VQ ++ + D S
Sbjct: 952 YFSIPEFVPPPPVPNETDVKEDLPAPPSPPPVENEEQPQPAQEVQPSSQDEDVEMNDASP 1011
Query: 79 QENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDL 138
+E + + +E S+ E + ++A + + + + +A EQ
Sbjct: 1012 EEAPTQPNQNQDEPEQHSEHVPSAPEPPEHEMSDNAPEQPETNGIEPTSVPEAQTDEQAA 1071
Query: 139 QGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIA-----IVRNRVIANWNIP 193
A + D ++ ++ S + P I RN V + +
Sbjct: 1072 NEAIIASIIAQDLALLDQPQEMDTSGSFTEANGIPPPPPMIDEEAAGSPRNEVEESREVQ 1131
Query: 194 SDFKRFKK 201
+
Sbjct: 1132 ERHPGSED 1139
>gi|149613296|ref|XP_001520264.1| PREDICTED: similar to coiled-coil domain containing 15
[Ornithorhynchus anatinus]
Length = 245
Score = 35.6 bits (80), Expect = 7.5, Method: Composition-based stats.
Identities = 9/171 (5%), Positives = 37/171 (21%)
Query: 22 YFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQEN 81
+ + +R M S +++ QE
Sbjct: 1 MLHLHFTEEEIEARELMRRWALFQTHPEPRRASSPSRHHSGASTNSQLPLVLQPGKEQEE 60
Query: 82 GDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGI 141
+ E+ + + K++ + +
Sbjct: 61 AKNERQKQFLQYRRLFMGLEREQVKERQRLKEHQRKSEKIKKQKEQWRQMEEQRIPGTHR 120
Query: 142 SFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNI 192
++ + + ++ + +K + + +R ++ +
Sbjct: 121 REDQRAGEEACETMAQLRLEETRGTRKQQKDREYRRYVDALRAQMQERIRL 171
>gi|308190369|ref|YP_003923300.1| hypothetical protein MFE_08560 [Mycoplasma fermentans JER]
gi|307625111|gb|ADN69416.1| conserved hypothetical membrane spanning protein [Mycoplasma
fermentans JER]
Length = 891
Score = 35.6 bits (80), Expect = 7.6, Method: Composition-based stats.
Identities = 8/139 (5%), Positives = 36/139 (25%)
Query: 75 DFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNK 134
+ + E +T+ + + + + + + V +A
Sbjct: 748 EEAEIEEKKNQKVETQKIEEDAKETITEIKEEVVPETKVEEQNIKVEEVKNPSAQQAQPN 807
Query: 135 EQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPS 194
+ ++ + + + + + + + P++ + + N
Sbjct: 808 QPKFNLNKPQDQYQQTSRLRQVNPNMYQNVQYPNQYQNFPNKGYVDPRFAQYPPRQNPYY 867
Query: 195 DFKRFKKLRVKMHFQLNQK 213
+ + + V N
Sbjct: 868 PNQNYTNINVAQRQPQNPN 886
>gi|296817403|ref|XP_002849038.1| MATH and UCH domain-containing protein [Arthroderma otae CBS 113480]
gi|238839491|gb|EEQ29153.1| MATH and UCH domain-containing protein [Arthroderma otae CBS 113480]
Length = 1492
Score = 35.6 bits (80), Expect = 7.6, Method: Composition-based stats.
Identities = 18/159 (11%), Positives = 46/159 (28%), Gaps = 1/159 (0%)
Query: 22 YFNFNVQLLVPISRREMLSV-DNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQE 80
+F+ + P E+ + D I + + + ++ + +
Sbjct: 964 FFSIPEFVPPPPISDEVNGMKDTIEAPPSPPPVQNEEQSQSTELVQPPNQDGDVEMNDAT 1023
Query: 81 NGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQG 140
D + T+ + + S A + + L P + S D+
Sbjct: 1024 PDDEPNPPTQPPTQIHNEETQESENLPSAPEPAELEMTDNVPDQAEPNSVEHAPVPDVNN 1083
Query: 141 ISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAI 179
A ++I ++ D L E + +++
Sbjct: 1084 DEQAANEAIIASIIAQDLALLDQSQEMDTSGSYTEANSV 1122
>gi|224069890|ref|XP_002303073.1| predicted protein [Populus trichocarpa]
gi|222844799|gb|EEE82346.1| predicted protein [Populus trichocarpa]
Length = 563
Score = 35.6 bits (80), Expect = 7.6, Method: Composition-based stats.
Identities = 26/204 (12%), Positives = 53/204 (25%), Gaps = 9/204 (4%)
Query: 54 YKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKES 113
K+ + K S+ E D + + E + S E+
Sbjct: 278 RKRKALSKGKAKQSASNPPASATKDAETDDNSNTKRIKPNEGEENENSPVKAEEEPKGSG 337
Query: 114 ALLRMP----VSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSS 169
++ K I + Q S AE+ + + R + L
Sbjct: 338 DDIQNKANSRPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKV 397
Query: 170 RKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTE 229
+ D I + S + + ++ F ++ ++ K
Sbjct: 398 TGKALMLDEIINYVQSLQRQVEFLSM--KLASVNTRLDFNMD---TLISKDIFQSSQPLP 452
Query: 230 LVRRMLRENARKAVIKSQAFRLSP 253
L +A A+ Q + P
Sbjct: 453 HPIFPLDSSAPAAIFSHQQQQNPP 476
>gi|254442983|ref|ZP_05056459.1| hypothetical protein VDG1235_1217 [Verrucomicrobiae bacterium
DG1235]
gi|198257291|gb|EDY81599.1| hypothetical protein VDG1235_1217 [Verrucomicrobiae bacterium
DG1235]
Length = 1131
Score = 35.6 bits (80), Expect = 7.6, Method: Composition-based stats.
Identities = 13/160 (8%), Positives = 40/160 (25%), Gaps = 1/160 (0%)
Query: 27 VQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFS 86
+ P E V+ + + Q + + + V +
Sbjct: 345 SIIQEPEPAIEANPVEIPEI-EKPELDCEPTTVQEKQPDAAETKPVQEAEEVAPAIEDIE 403
Query: 87 DQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEK 146
+ + E K + + + E+ L + + + ++
Sbjct: 404 PANQELESIEEEKPTPTLASDTIEDEANELVETEPTSIEDEHTAEPAEQSATVEEIEEAP 463
Query: 147 KSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRV 186
K+ D+ ++ K+ ++ + V
Sbjct: 464 KNEDSATPSNIEEPASPPNAKTQEEKQKKATPEDVAAQEV 503
>gi|170701072|ref|ZP_02892049.1| protein TolA [Burkholderia ambifaria IOP40-10]
gi|170134012|gb|EDT02363.1| protein TolA [Burkholderia ambifaria IOP40-10]
Length = 355
Score = 35.6 bits (80), Expect = 7.6, Method: Composition-based stats.
Identities = 25/217 (11%), Positives = 58/217 (26%), Gaps = 9/217 (4%)
Query: 54 YKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKES 113
++ ++ + K + + + Q + E ++ + +A E+
Sbjct: 148 EREKQKQADKLKQQQLVEQQKLEQQKAQQQKQQQQKQAQLEAQEAAKAKADAAAKAKAEA 207
Query: 114 ALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRI 173
+ + + A K + A+ + + + S S
Sbjct: 208 QAKAKAEAAAHAKADAAAKAKLDRERNARLAQMQGLAGAGEGGGQGLAKSGTGTGSGGNA 267
Query: 174 PSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRR 233
S VR RV N L + + G +L G +
Sbjct: 268 ASPGYADKVRRRVKPN---IVWGGERAGLTTIVRIRCTPSGDLLSVSVSRPSGNSGW--- 321
Query: 234 MLRENARKAVIKSQAFRLSPSTYKSWRNITLFFVPSK 270
+ A+ S + +IT+ F ++
Sbjct: 322 --DQAVVNAIQASVPLPPDTDG-HTPSSITITFKAAE 355
>gi|16129213|ref|NP_415768.1| membrane spanning protein in TonB-ExbB-ExbD transport complex
[Escherichia coli str. K-12 substr. MG1655]
gi|89108098|ref|AP_001878.1| membrane spanning protein in TonB-ExbB-ExbD complex [Escherichia
coli str. K-12 substr. W3110]
gi|170080929|ref|YP_001730249.1| membrane spanning protein in TonB-ExbB-ExbD complex [Escherichia
coli str. K-12 substr. DH10B]
gi|238900485|ref|YP_002926281.1| membrane spanning protein in TonB-ExbB-ExbD complex [Escherichia
coli BW2952]
gi|256023072|ref|ZP_05436937.1| transport protein TonB [Escherichia sp. 4_1_40B]
gi|401196|sp|P02929|TONB_ECOLI RecName: Full=Protein tonB
gi|1787505|gb|AAC74334.1| membrane spanning protein in TonB-ExbB-ExbD transport complex
[Escherichia coli str. K-12 substr. MG1655]
gi|85674886|dbj|BAA14784.2| membrane spanning protein in TonB-ExbB-ExbD complex [Escherichia
coli str. K12 substr. W3110]
gi|169888764|gb|ACB02471.1| membrane spanning protein in TonB-ExbB-ExbD complex [Escherichia
coli str. K-12 substr. DH10B]
gi|238861748|gb|ACR63746.1| membrane spanning protein in TonB-ExbB-ExbD complex [Escherichia
coli BW2952]
gi|309701550|emb|CBJ00857.1| TonB protein [Escherichia coli ETEC H10407]
gi|315135889|dbj|BAJ43048.1| transport protein TonB [Escherichia coli DH1]
gi|332342845|gb|AEE56179.1| transport protein TonB [Escherichia coli UMNK88]
Length = 239
Score = 35.6 bits (80), Expect = 7.8, Method: Composition-based stats.
Identities = 18/225 (8%), Positives = 51/225 (22%), Gaps = 20/225 (8%)
Query: 8 AISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGS 67
+S+ +H + L + Q++ + + +SV + D + + V
Sbjct: 14 LLSVCIHGAVVAGLLYTSVHQVIELPAPAQPISVTMVTPADLEPPQAVQPPPEPVVEPEP 73
Query: 68 SQ--------------ENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKES 113
E + + + + R +S A
Sbjct: 74 EPEPIPEPPKEAPVVIEKPKPKPKPKPKPVKKVQEQPKRDVKPVESRPASPFENTAPARL 133
Query: 114 ALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRI 173
+ + + + + + + K ++ + +I
Sbjct: 134 TSSTATAATSKPVTSVASGPRALSRNQPQYPARAQALRIEGQVKVKFDVTPDGRVDNVQI 193
Query: 174 PSQDAIAIVRNRVI---ANWNIPSDFKRFKKLRVKMHFQLNQKGF 215
S + V W + ++ G
Sbjct: 194 LSAKPANMFEREVKNAMRRWRYEPGKPGSG---IVVNILFKINGT 235
>gi|220907828|ref|YP_002483139.1| TonB family protein [Cyanothece sp. PCC 7425]
gi|219864439|gb|ACL44778.1| TonB family protein [Cyanothece sp. PCC 7425]
Length = 443
Score = 35.6 bits (80), Expect = 7.9, Method: Composition-based stats.
Identities = 21/169 (12%), Positives = 45/169 (26%)
Query: 7 LAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKG 66
L S++LH FL +L P + + + + + EP +
Sbjct: 26 LIGSLVLHAGFLAYAMTQPLQKLWSPPEEPIEIVLVEPPAPAVDQPEDEPVVEPEPPSEF 85
Query: 67 SSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQ 126
+++ N V + + + + + Q + P
Sbjct: 86 TTEPNQVEESTAALPDNPKPTAILPATPQPRPDLPPEPEQPQPSSIAPQTASPPVAPPPG 145
Query: 127 KISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPS 175
+ +A + + + + S P L S SS
Sbjct: 146 EAQQAPPSQPFVNSSANEPQTSPLPASPTPAATTLPSFGPGSSGPSNVP 194
>gi|115350732|ref|YP_772571.1| TolA family protein [Burkholderia ambifaria AMMD]
gi|115280720|gb|ABI86237.1| Cell division and transport-associated protein TolA [Burkholderia
ambifaria AMMD]
Length = 355
Score = 35.6 bits (80), Expect = 7.9, Method: Composition-based stats.
Identities = 25/217 (11%), Positives = 59/217 (27%), Gaps = 9/217 (4%)
Query: 54 YKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKES 113
++ ++ + K + + + Q + E ++ + +A E+
Sbjct: 148 EREKQKQADKLKQQQLVEQQKLEQQKAQQQKQQQQKQAQLEAQEAAKAKADAAAKAKAEA 207
Query: 114 ALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRI 173
+ + + A K + A+ + + + S S
Sbjct: 208 QAKAKAEAAAHAKADAAAKAKLDRERNARLAQMQGLAGAGEGGGQGLAKSGTGTGSGGNA 267
Query: 174 PSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRR 233
S VR RV N L + + G +L G +
Sbjct: 268 ASPGYADKVRRRVKPN---IVWGGERAGLTTIVKIRCTPSGDLLSVSVSRPSGNSGW--- 321
Query: 234 MLRENARKAVIKSQAFRLSPSTYKSWRNITLFFVPSK 270
+ A+ S + + +IT+ F ++
Sbjct: 322 --DQAVVNAIQASVPLP-PDTDGHTPSSITITFKAAE 355
>gi|195390642|ref|XP_002053977.1| GJ23047 [Drosophila virilis]
gi|194152063|gb|EDW67497.1| GJ23047 [Drosophila virilis]
Length = 1092
Score = 35.6 bits (80), Expect = 8.0, Method: Composition-based stats.
Identities = 15/130 (11%), Positives = 43/130 (33%), Gaps = 2/130 (1%)
Query: 31 VPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTK 90
P ++ E+ + + +E+ + + ++ S E + + N + S + K
Sbjct: 235 PPPTKPEINDAEEVSDEELPAPQRAELPADA--EVISEDELPTHNNNNNNNESKGSGKRK 292
Query: 91 THATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSID 150
NET + +Q+ E+ Y+ + +N + ++ +
Sbjct: 293 AGRDANETHEKIDDEQQQSNSETNTKVKQTEQYNPGSPTSESNDAPPSEKRPRVDEDAEH 352
Query: 151 TVVVRPDKKE 160
+ +
Sbjct: 353 KDKEKEKDSQ 362
>gi|317491196|ref|ZP_07949632.1| TolA protein [Enterobacteriaceae bacterium 9_2_54FAA]
gi|316920743|gb|EFV42066.1| TolA protein [Enterobacteriaceae bacterium 9_2_54FAA]
Length = 411
Score = 35.6 bits (80), Expect = 8.1, Method: Composition-based stats.
Identities = 11/110 (10%), Positives = 37/110 (33%), Gaps = 2/110 (1%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPV 61
+L + +S+ILH++ + LL + + + ++E
Sbjct: 10 KLNRSVIVSIILHIVLIALLV--WGSMMQDSTISAGGGGGGGSAIDAVMVDSGAMVKEYN 67
Query: 62 VQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALK 111
+ + + ++ D+ +++ + E + + + K +
Sbjct: 68 DRQQQLQSDARRAQQERKKQADKQAEELQQKQAEEQQRLKALEKERIQAQ 117
>gi|261416128|ref|YP_003249811.1| TonB family protein [Fibrobacter succinogenes subsp. succinogenes
S85]
gi|261372584|gb|ACX75329.1| TonB family protein [Fibrobacter succinogenes subsp. succinogenes
S85]
gi|302325756|gb|ADL24957.1| TonB family protein [Fibrobacter succinogenes subsp. succinogenes
S85]
Length = 236
Score = 35.6 bits (80), Expect = 8.1, Method: Composition-based stats.
Identities = 18/192 (9%), Positives = 54/192 (28%), Gaps = 11/192 (5%)
Query: 74 RDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATN 133
+ + + + + + ++ V +++ +
Sbjct: 37 KKQEISTQRPDSPVMHAEKVYIAPPPPPEAPPVVKKVVRAKIIPKVVEKPVEEQPPEPEP 96
Query: 134 KEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIP-SQDAIAIVRNRVIANWNI 192
+ + + P + + S+ ++ + ++ ++ +
Sbjct: 97 IPKPVTETAPVAVAEPVVEAPPPAPPVVKEPPKPSADSVKMVTRTYLRSLKKQLEQIKDY 156
Query: 193 PSDFKRFKK-LRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVI---KSQA 248
P+ KR K+ V++ F + G + + L +A +AV K Q
Sbjct: 157 PATAKRLKQEGTVRVRFTILADGKIEQIEVSESSR-----YSSLDNSALEAVANMGKFQP 211
Query: 249 FRLSPSTYKSWR 260
+ WR
Sbjct: 212 IPKLLEK-ERWR 222
>gi|119180538|ref|XP_001241730.1| hypothetical protein CIMG_08893 [Coccidioides immitis RS]
Length = 775
Score = 35.6 bits (80), Expect = 8.1, Method: Composition-based stats.
Identities = 25/213 (11%), Positives = 61/213 (28%), Gaps = 31/213 (14%)
Query: 57 IEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKES--- 113
+E +++ Q+NL + + ++ K A +T R +++ +
Sbjct: 365 KKEQELEYYKDLQKNLASESKREIRRILDAEDMKDEAQLEKTIRELEKSIKRSRNKDLGQ 424
Query: 114 ------------ALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKEL 161
ALL +P D+ + + ++ + ++ + + E
Sbjct: 425 EETEENSEEMSFALLDVPDEELDEAGLKEKKHQRLMKSNVEARQRAKEEKEREKARIAEE 484
Query: 162 LSKVEKSSRKRIPS-----QDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQ----LNQ 212
+ + A + R+ + +D K L ++ + L
Sbjct: 485 ERLDTEKRENNFEVWVEERRQARDAIIQRIKERERMKADLGNRKSLASQIRMKTLANLAA 544
Query: 213 KGFVLGKINVDVVGGTELVRRMLRE--NARKAV 243
G GG + E + V
Sbjct: 545 DG-----PKKRRRGGDDDTFGANDEDWGVYRTV 572
>gi|329767493|ref|ZP_08259016.1| hypothetical protein HMPREF0428_00713 [Gemella haemolysans M341]
gi|328835827|gb|EGF85549.1| hypothetical protein HMPREF0428_00713 [Gemella haemolysans M341]
Length = 388
Score = 35.6 bits (80), Expect = 8.2, Method: Composition-based stats.
Identities = 14/146 (9%), Positives = 39/146 (26%)
Query: 44 IYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSS 103
+ + ++ K E+PVV + + + + + K
Sbjct: 242 VTKAEKPATPSPKAEKPVVPAPKAEEPATSAPKAEKPASPAPKAEEPVAPAPKAEKPVVP 301
Query: 104 SKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLS 163
+ + A + A + +K+ + K +
Sbjct: 302 APKAEEPATPAPKAEKPVVSSPKAEGPAAPAPKAENQWYQHQKQRNQWYQHQKQKSQRHQ 361
Query: 164 KVEKSSRKRIPSQDAIAIVRNRVIAN 189
++ S++R + +R + N
Sbjct: 362 HQKRKSQQRQHRKQRNQRLRRQKQRN 387
>gi|293357883|ref|XP_575155.3| PREDICTED: titin [Rattus norvegicus]
Length = 26093
Score = 35.6 bits (80), Expect = 8.2, Method: Composition-based stats.
Identities = 7/74 (9%), Positives = 19/74 (25%)
Query: 48 DYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGE 107
+ K + K +E + + +V + + K ++ K
Sbjct: 10842 EKPKLKPRPPIRAPSPPKEDVKEKIFQLKAVSKKKVPEKPEVVEKVEPTPLKVPTAEKKV 10901
Query: 108 QALKESALLRMPVS 121
+ L +
Sbjct: 10902 RKLLPEPKPQPKEE 10915
>gi|293404794|ref|ZP_06648786.1| transporter TonB [Escherichia coli FVEC1412]
gi|293409639|ref|ZP_06653215.1| conserved hypothetical protein [Escherichia coli B354]
gi|298380435|ref|ZP_06990034.1| transporter TonB [Escherichia coli FVEC1302]
gi|300896108|ref|ZP_07114663.1| gram-negative bacterial TonB protein [Escherichia coli MS 198-1]
gi|301019459|ref|ZP_07183630.1| gram-negative bacterial TonB protein [Escherichia coli MS 69-1]
gi|331672782|ref|ZP_08373568.1| membrane protein [Escherichia coli TA280]
gi|331682739|ref|ZP_08383358.1| membrane protein [Escherichia coli H299]
gi|902437|gb|AAB60117.1| membrane protein [Escherichia coli]
gi|291427002|gb|EFF00029.1| transporter TonB [Escherichia coli FVEC1412]
gi|291470107|gb|EFF12591.1| conserved hypothetical protein [Escherichia coli B354]
gi|298277877|gb|EFI19391.1| transporter TonB [Escherichia coli FVEC1302]
gi|300359995|gb|EFJ75865.1| gram-negative bacterial TonB protein [Escherichia coli MS 198-1]
gi|300399246|gb|EFJ82784.1| gram-negative bacterial TonB protein [Escherichia coli MS 69-1]
gi|323964653|gb|EGB60125.1| TonB family protein domain-containing protein [Escherichia coli
M863]
gi|331070003|gb|EGI41372.1| membrane protein [Escherichia coli TA280]
gi|331080370|gb|EGI51549.1| membrane protein [Escherichia coli H299]
Length = 244
Score = 35.6 bits (80), Expect = 8.2, Method: Composition-based stats.
Identities = 18/225 (8%), Positives = 51/225 (22%), Gaps = 20/225 (8%)
Query: 8 AISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGS 67
+S+ +H + L + Q++ + + +SV + D + + V
Sbjct: 19 LLSVCIHGAVVAGLLYTSVHQVIELPAPAQPISVTMVAPADLEPPQAVQPPPEPVVEPEP 78
Query: 68 SQ--------------ENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKES 113
E + + + + R +S A
Sbjct: 79 EPEPIPEPPKEAPVVIEKPKPKPKPKPKPVKKVQEQPKRDVKPVESRPASPFENTAPARP 138
Query: 114 ALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRI 173
+ + + + + + + K ++ + +I
Sbjct: 139 TSSTATAATSKPVTSVASGPRALSRNQPQYPARAQALRIEGQVKVKFDVTPDGRVDNVQI 198
Query: 174 PSQDAIAIVRNRVI---ANWNIPSDFKRFKKLRVKMHFQLNQKGF 215
S + V W + ++ G
Sbjct: 199 LSAKPANMFEREVKNAMRRWRYEPGKPGSG---IVVNILFKINGT 240
>gi|331652290|ref|ZP_08353309.1| membrane protein [Escherichia coli M718]
gi|902419|gb|AAB60101.1| membrane protein [Escherichia coli]
gi|331050568|gb|EGI22626.1| membrane protein [Escherichia coli M718]
Length = 244
Score = 35.6 bits (80), Expect = 8.2, Method: Composition-based stats.
Identities = 18/225 (8%), Positives = 51/225 (22%), Gaps = 20/225 (8%)
Query: 8 AISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGS 67
+S+ +H + L + Q++ + + +SV + D + + V
Sbjct: 19 LLSVCIHGAVVAGLLYTSVHQVIELPAPAQPISVTMVAPADLEPPQAVQPPPEPVVKPEP 78
Query: 68 SQ--------------ENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKES 113
E + + + + R +S A
Sbjct: 79 EPEPIPEPPKEAPVVIEKPKPKPKPKPKPVKKVQEQPKRDVKPVESRPASPFENTAPARP 138
Query: 114 ALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRI 173
+ + + + + + + K ++ + +I
Sbjct: 139 TSSTATAATSKPVTSVASGPRALSRNQPQYPARAQALRIEGQVKVKFDVTPDGRVDNVQI 198
Query: 174 PSQDAIAIVRNRVI---ANWNIPSDFKRFKKLRVKMHFQLNQKGF 215
S + V W + ++ G
Sbjct: 199 LSAKPANMFEREVKNAMRRWRYEPGKPGSG---IVVNILFKINGT 240
>gi|237730720|ref|ZP_04561201.1| tolA protein [Citrobacter sp. 30_2]
gi|226906259|gb|EEH92177.1| tolA protein [Citrobacter sp. 30_2]
Length = 418
Score = 35.3 bits (79), Expect = 8.3, Method: Composition-based stats.
Identities = 14/108 (12%), Positives = 38/108 (35%), Gaps = 1/108 (0%)
Query: 2 RLENGLAISMILHVMFLLLLYF-NFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEP 60
+L+ + IS +LHV+ L + +F+ + S+D + + + ++
Sbjct: 10 KLKRAIIISAVLHVILFAALIWSSFDEHIDASAGGGGGSSIDAVMVDPGAVVQQYDRQQQ 69
Query: 61 VVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQ 108
++E + Q R + + K +++ +
Sbjct: 70 QQASAKRAEEQREKQAQQQAEELREKQAAEQERLKQLEKERLAAQEKV 117
>gi|313649443|gb|EFS13874.1| protein tonB [Shigella flexneri 2a str. 2457T]
gi|332757905|gb|EGJ88232.1| protein tonB [Shigella flexneri 4343-70]
gi|332767486|gb|EGJ97680.1| tonB protein [Shigella flexneri 2930-71]
gi|333005552|gb|EGK25070.1| protein tonB [Shigella flexneri K-218]
Length = 244
Score = 35.3 bits (79), Expect = 8.5, Method: Composition-based stats.
Identities = 18/225 (8%), Positives = 51/225 (22%), Gaps = 20/225 (8%)
Query: 8 AISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGS 67
+S+ +H + L + Q++ + + +SV + D + + V
Sbjct: 19 LLSVCIHGAVVAGLLYTSVHQVIELPAPAQPISVTMVAPADLEPPQAVQPPPEPVVEPEP 78
Query: 68 SQ--------------ENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKES 113
E + + + + R +S A
Sbjct: 79 EPEPIPEPPKEAPVVIEKPKPKPKPKPKPVKKVQEQPKRDVKPVESRPASPFENTAPARP 138
Query: 114 ALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRI 173
+ + + + + + + K ++ + +I
Sbjct: 139 TSSTATAATSKPVTSVASGPRALSRNQPQYPARAQALRIEGQVKVKFDVTPDGRVDNVQI 198
Query: 174 PSQDAIAIVRNRVI---ANWNIPSDFKRFKKLRVKMHFQLNQKGF 215
S + V W + ++ G
Sbjct: 199 LSAKPANMFEREVKNAMRRWRYEPGKPGSG---IVVNILFKINGT 240
>gi|148263363|ref|YP_001230069.1| secretion protein HlyD family protein [Geobacter uraniireducens
Rf4]
gi|146396863|gb|ABQ25496.1| secretion protein HlyD family protein [Geobacter uraniireducens
Rf4]
Length = 361
Score = 35.3 bits (79), Expect = 8.5, Method: Composition-based stats.
Identities = 22/184 (11%), Positives = 47/184 (25%)
Query: 42 DNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRS 101
+NI S +I Q L+ + SVQ A +
Sbjct: 60 ENINIYPEVSGIITRILVAEGQSVRQGTPLLMIEDSVQRATVAQQKSQAEAALALLEELK 119
Query: 102 SSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKEL 161
+ + E A + + + ++ K +D +
Sbjct: 120 AMPRKENLEVAKAQVDFASASLKNAQDQLDKQRQSYALNPKSVSKIDLDNAENAVHVAKA 179
Query: 162 LSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKIN 221
+V + + + I +RN+ + + + L K + G +L
Sbjct: 180 NLEVARRQYELTKAGAWIYDIRNQEKQHQALTKAYMASDALLAKYIIRAPSDGVILSINA 239
Query: 222 VDVV 225
Sbjct: 240 AVGS 243
>gi|316975430|gb|EFV58874.1| domain protein, SNF2 family [Trichinella spiralis]
Length = 1023
Score = 35.3 bits (79), Expect = 8.6, Method: Composition-based stats.
Identities = 24/197 (12%), Positives = 53/197 (26%), Gaps = 6/197 (3%)
Query: 57 IEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALL 116
E Q K + L + ++ GD + ++++ S ++ KE+ L
Sbjct: 209 KERKHQQRKQMRRAFLAEELLSEKEGDEEENHINDEDVKSKSDSPVESVAQKPAKEAPLT 268
Query: 117 RMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQ 176
S + + + + K +V K L V +S
Sbjct: 269 VKQFFKRRFVLSSDEEETDDAVACTTSSAVKEEPVLVEEQQAKHLRRVVYRSDEGEDSDA 328
Query: 177 DAIAIVRNRVI-ANWNIPSDFKRFKKLRVKMHFQLNQKGFVL-GKINVDVVGGTEL---- 230
+ N++ S + + ++ + K V E
Sbjct: 329 SKQDSYSSSTKDENYSDDSASGSDNDVDEAVKMDVDTDAKLQFKKPIVLKRRDMEAKCLE 388
Query: 231 VRRMLRENARKAVIKSQ 247
R + A+ +
Sbjct: 389 FFRSADPSQLAALPRCS 405
>gi|313233858|emb|CBY10027.1| unnamed protein product [Oikopleura dioica]
Length = 7320
Score = 35.3 bits (79), Expect = 8.6, Method: Composition-based stats.
Identities = 15/205 (7%), Positives = 55/205 (26%), Gaps = 13/205 (6%)
Query: 55 KKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESA 114
+I+ + Q + +Q+ D ++ + + + + +
Sbjct: 6857 AQIQYELEQNRLKAQQKHQADMDEAARQKAIEEERRLRKQQEDLLNKKNRLKTDK-QLEK 6915
Query: 115 LLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVR---PDKKELLSKVEKSSRK 171
+ +K ++ ++ + ++ + +K L + +++
Sbjct: 6916 ERQKAAEEAEKARLEAMVLANEERARVKLENERIQIESSNKNDSEKEKLLRELDARHAKQ 6975
Query: 172 RIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKM---------HFQLNQKGFVLGKINV 222
R+ + + + + + V K V
Sbjct: 6976 AADRAAQTNKARSELEKRLAARRARAAEAPEEITVDEQSSETPAQILIKSEEVVQQKSTV 7035
Query: 223 DVVGGTELVRRMLRENARKAVIKSQ 247
D + +A +A++K+
Sbjct: 7036 DHSQVLLKSGLIEDLSALEAILKAS 7060
>gi|253989521|ref|YP_003040877.1| transport protein TonB [Photorhabdus asymbiotica subsp. asymbiotica
ATCC 43949]
gi|253780971|emb|CAQ84133.1| iron ion transmembrane transporter-tonb protein [Photorhabdus
asymbiotica]
Length = 229
Score = 35.3 bits (79), Expect = 8.6, Method: Composition-based stats.
Identities = 27/250 (10%), Positives = 65/250 (26%), Gaps = 50/250 (20%)
Query: 7 LAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKG 66
+ +S+ LH+ L F + ++SV I
Sbjct: 16 ILLSVCLHISVAAAL---FCTMIPEKQPDAALMSVAMIQLA------------------- 53
Query: 67 SSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQ 126
++E V + + E + + K + + +++ P +++
Sbjct: 54 -AEETSVSEPAAPEPVLEPEEPPEPEPVPEPVIPKPEVKKRKPEVKKKIVKKQSEPVERK 112
Query: 127 KISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRV 186
+ + DT + + LSK R +
Sbjct: 113 AEQPEKPLFNQNALANRTDNNQSDTAIKPQKGPKALSKSLPVYPSRAVALGTEGY----- 167
Query: 187 IANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKS 246
VK+ + +++ G V + + +KA+ K
Sbjct: 168 -----------------VKVKYDIDEDGRVKNIEVIGANPPN-----VFDREVKKAMRKW 205
Query: 247 QAFRLSPSTY 256
+ ++ Y
Sbjct: 206 RYEKIPAVGY 215
>gi|229003884|ref|ZP_04161692.1| Immune inhibitor A [Bacillus mycoides Rock1-4]
gi|228757392|gb|EEM06629.1| Immune inhibitor A [Bacillus mycoides Rock1-4]
Length = 795
Score = 35.3 bits (79), Expect = 8.6, Method: Composition-based stats.
Identities = 19/152 (12%), Positives = 49/152 (32%), Gaps = 3/152 (1%)
Query: 9 ISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSS 68
+S++ L F F + L +D D ++ K + Q +
Sbjct: 10 LSVLATAAVLSST-FAFGSHAAYAETPSSSLPIDEHLIPDERLAEALKERGVIDQSASQA 68
Query: 69 QENLVRDFSVQENG--DRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQ 126
+ + + V++ + + + E + +KE+ + P +
Sbjct: 69 ETSKAVEKYVEKKKGENPGKEIITEDSLTQEASDFMKKVKDAKMKENEQAQQPTAGPVAG 128
Query: 127 KISKATNKEQDLQGISFAEKKSIDTVVVRPDK 158
+ + ++ + + + K+ VR DK
Sbjct: 129 QDAGLNPRKLNGKVPTTPAKQEEYNGTVRKDK 160
>gi|219110137|ref|XP_002176820.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217411355|gb|EEC51283.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 755
Score = 35.3 bits (79), Expect = 8.8, Method: Composition-based stats.
Identities = 22/162 (13%), Positives = 55/162 (33%), Gaps = 9/162 (5%)
Query: 47 EDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSS--- 103
ED I L + ++ DR + + E + +
Sbjct: 207 EDIAQPGELPIHHDGPVEDPRQSNLLYSEPPSDDSNDRSLGKKRKPKMEKIQELKAKNDL 266
Query: 104 -SKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELL 162
+ + +++ Y K +I+ TN+ + K+ + + D+ +L
Sbjct: 267 YKEEFKRVQKDRKKLKKEVEYKKSEIASLTNEIDSHIEETSVLKRKLSEALQELDRTDLS 326
Query: 163 SKVEKSS-----RKRIPSQDAIAIVRNRVIANWNIPSDFKRF 199
S+ +KS+ ++ + S++ + +R R+ N +
Sbjct: 327 SRKDKSNLVRVNKELVESREELDALRTRIKELNNDIATLHDA 368
>gi|30062775|ref|NP_836946.1| transport protein TonB [Shigella flexneri 2a str. 2457T]
gi|56479866|ref|NP_707161.2| transport protein TonB [Shigella flexneri 2a str. 301]
gi|82544293|ref|YP_408240.1| transport protein TonB [Shigella boydii Sb227]
gi|30041023|gb|AAP16753.1| membrane protein, energy transducer [Shigella flexneri 2a str.
2457T]
gi|56383417|gb|AAN42868.2| membrane protein, energy transducer [Shigella flexneri 2a str. 301]
gi|81245704|gb|ABB66412.1| TonB [Shigella boydii Sb227]
Length = 242
Score = 35.3 bits (79), Expect = 8.8, Method: Composition-based stats.
Identities = 18/225 (8%), Positives = 51/225 (22%), Gaps = 20/225 (8%)
Query: 8 AISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGS 67
+S+ +H + L + Q++ + + +SV + D + + V
Sbjct: 17 LLSVCIHGAVVAGLLYTSVHQVIELPAPAQPISVTMVAPADLEPPQAVQPPPEPVVEPEP 76
Query: 68 SQ--------------ENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKES 113
E + + + + R +S A
Sbjct: 77 EPEPIPEPPKEAPVVIEKPKPKPKPKPKPVKKVQEQPKRDVKPVESRPASPFENTAPARP 136
Query: 114 ALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRI 173
+ + + + + + + K ++ + +I
Sbjct: 137 TSSTATAATSKPVTSVASGPRALSRNQPQYPARAQALRIEGQVKVKFDVTPDGRVDNVQI 196
Query: 174 PSQDAIAIVRNRVI---ANWNIPSDFKRFKKLRVKMHFQLNQKGF 215
S + V W + ++ G
Sbjct: 197 LSAKPANMFEREVKNAMRRWRYEPGKPGSG---IVVNILFKINGT 238
>gi|317477854|ref|ZP_07937040.1| translation initiation factor IF-2 [Bacteroides sp. 4_1_36]
gi|316905990|gb|EFV27758.1| translation initiation factor IF-2 [Bacteroides sp. 4_1_36]
Length = 1015
Score = 35.3 bits (79), Expect = 9.1, Method: Composition-based stats.
Identities = 18/158 (11%), Positives = 41/158 (25%)
Query: 50 HSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQA 109
+ + EP Q Q V + + K E + +
Sbjct: 163 SQPEVQPASEPEPQPVSEPQPQPVVKEEPAPVVEAQQESKKEEMIEAPAPVPVAEEAPVE 222
Query: 110 LKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSS 169
+ + + +SK Q + K+ + +
Sbjct: 223 KEGKEEGEEIFKIHQPEFVSKINVIGQIDLAALNQSTRPKKKSKEEKRKEREEKEKIRQD 282
Query: 170 RKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMH 207
+K+ + I +R + + KK RV+++
Sbjct: 283 QKKQMKEAIIKEIRRDDSKLKDTAAGDANGKKKRVRIN 320
>gi|240280056|gb|EER43560.1| DNA-binding protein [Ajellomyces capsulatus H143]
Length = 674
Score = 35.3 bits (79), Expect = 9.1, Method: Composition-based stats.
Identities = 23/152 (15%), Positives = 54/152 (35%), Gaps = 4/152 (2%)
Query: 40 SVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRD----FSVQENGDRFSDQTKTHATE 95
S+D I E P ++ ++ + + F Q + + +T+
Sbjct: 42 SLDEIKASSTTQPGADPDEPPALKPGEEARSLVCNECGKRFRSQAQAEFHASKTEHVDFA 101
Query: 96 NETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVR 155
T+ + + + LR ++ Q+ + ++ + I K + +
Sbjct: 102 ESTEEIAPLTEVEKEAKLEELRQKLAAKKAQRSEQDKIDQKRNEEIRKKSTKEVQDIKEA 161
Query: 156 PDKKELLSKVEKSSRKRIPSQDAIAIVRNRVI 187
KKE L + K R++ +A A +R ++
Sbjct: 162 LQKKEQLKEAAKKRREKQEEIEAKARIRAKIE 193
>gi|308064117|gb|ADO06004.1| siderophore-mediated iron transport protein (tonB) [Helicobacter
pylori Sat464]
Length = 286
Score = 35.3 bits (79), Expect = 9.1, Method: Composition-based stats.
Identities = 14/120 (11%), Positives = 35/120 (29%), Gaps = 6/120 (5%)
Query: 136 QDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSD 195
+ ++ + +K + E + S + + ++ + + P
Sbjct: 156 SAPKQVTTKDIVKEKDKQEESNKTSEGATSEAQAYNPGVSNEFLMKIQTAISSKNRYPKM 215
Query: 196 FKRFK-KLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPS 254
+ + V + F +N G V V +L A +A+ + P
Sbjct: 216 AQIRGIEGEVLVSFVINPDGSVTDIKVVKSNTTD-----ILNHAALEAIKNAAYLFPKPE 270
>gi|307309993|ref|ZP_07589643.1| TonB family protein [Escherichia coli W]
gi|306909711|gb|EFN40205.1| TonB family protein [Escherichia coli W]
gi|315060503|gb|ADT74830.1| membrane spanning protein in TonB-ExbB-ExbD complex [Escherichia
coli W]
gi|323378933|gb|ADX51201.1| TonB family protein [Escherichia coli KO11]
Length = 244
Score = 35.3 bits (79), Expect = 9.1, Method: Composition-based stats.
Identities = 18/225 (8%), Positives = 51/225 (22%), Gaps = 20/225 (8%)
Query: 8 AISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGS 67
+S+ +H + L + Q++ + + +SV + D + + V
Sbjct: 19 LLSVCIHGAVVAGLLYTSVHQVIELPAPAQPISVTMVAPADLEPPQAVQPPPEPVVEPEP 78
Query: 68 SQ--------------ENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKES 113
E + + + + R +S A
Sbjct: 79 EPEPIPEPPKEAPAVIEKPKPKPKPKPKPVKKVQEQPKRDVKPVESRPASPFENTAPARP 138
Query: 114 ALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRI 173
+ + + + + + + K ++ + +I
Sbjct: 139 TSSTATAATSKPVTSVASGPRALSRNQPQYPARAQALRIEGQVKVKFDVTPDGRVDNVQI 198
Query: 174 PSQDAIAIVRNRVI---ANWNIPSDFKRFKKLRVKMHFQLNQKGF 215
S + V W + ++ G
Sbjct: 199 LSAKPANMFEREVKNAMRRWRYEPGKPGSG---IVVNILFKINGT 240
>gi|293414524|ref|ZP_06657173.1| transporter TonB [Escherichia coli B185]
gi|291434582|gb|EFF07555.1| transporter TonB [Escherichia coli B185]
Length = 239
Score = 35.3 bits (79), Expect = 9.1, Method: Composition-based stats.
Identities = 18/225 (8%), Positives = 51/225 (22%), Gaps = 20/225 (8%)
Query: 8 AISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGS 67
+S+ +H + L + Q++ + + +SV + D + + V
Sbjct: 14 LLSVCIHGAVVAGLLYTSVHQVIELPAPAQPISVTMVAPADLEPPQAVQPPPEPVVEPEP 73
Query: 68 SQ--------------ENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKES 113
E + + + + R +S A
Sbjct: 74 EPEPIPEPPKEAPVVIEKPKPKPKPKPKPVKKVQEQPKRDVKPVESRPASPFENTAPARP 133
Query: 114 ALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRI 173
+ + + + + + + K ++ + +I
Sbjct: 134 TSSTATAATSKPVTSVASGPRALSRNQPQYPARAQALRIEGQVKVKFDVTPDGRVDNVQI 193
Query: 174 PSQDAIAIVRNRVI---ANWNIPSDFKRFKKLRVKMHFQLNQKGF 215
S + V W + ++ G
Sbjct: 194 LSAKPANMFEREVKNAMRRWRYEPGKPGSG---IVVNILFKINGT 235
>gi|209695364|ref|YP_002263293.1| TolA protein, membrane component [Aliivibrio salmonicida LFI1238]
gi|208009316|emb|CAQ79582.1| TolA protein, membrane component [Aliivibrio salmonicida LFI1238]
Length = 335
Score = 35.3 bits (79), Expect = 9.1, Method: Composition-based stats.
Identities = 17/209 (8%), Positives = 53/209 (25%), Gaps = 10/209 (4%)
Query: 46 NEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSK 105
K + + + + + K + ++ + +
Sbjct: 120 VAQAKKEKERATAAEADRKRKVDTAAKAEAARLTKVKADKEKAEKARLDKERATKAEAER 179
Query: 106 GEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKV 165
+ + + K + + ++ +++ + + + + +
Sbjct: 180 VAKEKIAKEKAAKAKAKLAAENAKKEKARAAKAEAARKQKEAALNDIFAGLEDETVQNSS 239
Query: 166 EKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVV 225
K AI R+ N + + K+ +L G +L +
Sbjct: 240 AKQQHIDDEVNRYAAIFTQRIQRNLLVDESYVGK---SCKVKIKLASSGLLLSVTTL--- 293
Query: 226 GGTELVRRMLRENARKAVIKSQAFRLSPS 254
+ A+ AV K F++
Sbjct: 294 ----GGDAQVCRAAKIAVTKVNVFQMPKD 318
>gi|207093036|ref|ZP_03240823.1| siderophore-mediated iron transport protein (tonB) [Helicobacter
pylori HPKX_438_AG0C1]
gi|207108513|ref|ZP_03242675.1| siderophore-mediated iron transport protein (tonB) [Helicobacter
pylori HPKX_438_CA4C1]
Length = 286
Score = 35.3 bits (79), Expect = 9.1, Method: Composition-based stats.
Identities = 30/260 (11%), Positives = 70/260 (26%), Gaps = 18/260 (6%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEE------ 59
IS L+ + YF + P+++ V +SK K E
Sbjct: 18 SFLISFALYA--IGFGYFLLHEDAPEPLAQAGTTKVTMSLASINTNSKVKTNAESAKPKE 75
Query: 60 ----PVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESAL 115
+ + +E + + + K + E
Sbjct: 76 EPKEKPKKEEPKKEEPKKETKPKPKPKPKPKPKPKPKPEPKPKPEPKPEPKPEPKVEEIK 135
Query: 116 LRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPS 175
P K++ + ++ + ++ + +K + E + S
Sbjct: 136 KEEPKEKPKKEEAKEEAKEKSAPKQVTTKDIVKEKDKQEESNKTSEGATSEAQAYNPGVS 195
Query: 176 QDAIAIVRNRVIANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRM 234
+ + ++ + + P + + V + F +N G V V +
Sbjct: 196 NEFLMKIQTAISSKNRYPKMAQIRGIEGEVLVSFTINADGSVTDIKVVKSNTTD-----I 250
Query: 235 LRENARKAVIKSQAFRLSPS 254
L A +A+ + P
Sbjct: 251 LNHAALEAIKNAAHLFPKPE 270
>gi|196231290|ref|ZP_03130149.1| OmpA/MotB domain protein [Chthoniobacter flavus Ellin428]
gi|196224626|gb|EDY19137.1| OmpA/MotB domain protein [Chthoniobacter flavus Ellin428]
Length = 316
Score = 35.3 bits (79), Expect = 9.1, Method: Composition-based stats.
Identities = 18/177 (10%), Positives = 45/177 (25%), Gaps = 5/177 (2%)
Query: 3 LENGLA----ISMILHVMFLLLLYF-NFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKI 57
+ L +S+++H + L+ F + R + + + +
Sbjct: 17 MRKWLFRALILSLLVHAVLLVFFNFKKLENFGYTTVDRPAITPIKMVRVNITEPPAAESK 76
Query: 58 EEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLR 117
E + + E + S + + K S E A L
Sbjct: 77 TETTPKTPVKPIKIEETKPFADEVDLKPSAPDVSPLVPAKPKNLDLSGFETPASSVAALE 136
Query: 118 MPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIP 174
+S + ++ + + A K + V + + +
Sbjct: 137 KQLSAKPGAILDQSLAVGRQPKIKLPAGPKGGEGGVGSDGSIPGRASLNDALGNVGA 193
>gi|226509504|ref|NP_001142201.1| hypothetical protein LOC100274369 [Zea mays]
gi|194707578|gb|ACF87873.1| unknown [Zea mays]
Length = 602
Score = 35.3 bits (79), Expect = 9.2, Method: Composition-based stats.
Identities = 8/127 (6%), Positives = 25/127 (19%)
Query: 41 VDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKR 100
+D D + K + + E + + + +++
Sbjct: 392 IDLESVYDGTAPKEITSDFKAPAAPSAVTEKPATKMEEPKKEEAKPAPALRSPPPSMSEQ 451
Query: 101 SSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKE 160
S + + D + + Q + + P
Sbjct: 452 KGSISAMASRYQDKQEEEEEDDDDASSFEEVSRPAQRQAVPAKFTPPAQPQTAPAPSPAI 511
Query: 161 LLSKVEK 167
+
Sbjct: 512 VAKPSSP 518
>gi|90424413|ref|YP_532783.1| hypothetical protein RPC_2917 [Rhodopseudomonas palustris BisB18]
gi|90106427|gb|ABD88464.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB18]
Length = 247
Score = 35.3 bits (79), Expect = 9.2, Method: Composition-based stats.
Identities = 11/154 (7%), Positives = 36/154 (23%), Gaps = 2/154 (1%)
Query: 76 FSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKE 135
++ D ++ K + K + P +K + + +
Sbjct: 57 PPPRQVRDLTIVNIVPPPPPPPPQKMPEQKMIEQPKMAEPEFKEDKPLEKPQDEPIKDAK 116
Query: 136 QDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIV-RNRVIANWNIPS 194
+ + A + ++++ A S
Sbjct: 117 NSEPPGPLSLDAKAVGPGDLFNLGGKPGGSPYGGGGGGSRWGWYASIVQSQIEAALRGNS 176
Query: 195 DFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGT 228
+ ++V++ + G + + G
Sbjct: 177 RTRNAV-MQVRVRLWADGSGRISRVELMSSTGDA 209
>gi|330845768|ref|XP_003294743.1| hypothetical protein DICPUDRAFT_100046 [Dictyostelium purpureum]
gi|325074740|gb|EGC28734.1| hypothetical protein DICPUDRAFT_100046 [Dictyostelium purpureum]
Length = 1445
Score = 35.3 bits (79), Expect = 9.3, Method: Composition-based stats.
Identities = 24/163 (14%), Positives = 40/163 (24%), Gaps = 10/163 (6%)
Query: 24 NFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGD 83
F L+PIS R V ++ +P K V +
Sbjct: 142 AFPSLPLIPISTRR--RVKIQNVKEEIEQTQSPPLQPEQAVKKKRGRKPGVKEIVIIKEE 199
Query: 84 RFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISF 143
+Q K + E E + D I +
Sbjct: 200 VQIEQDKMIEVKKEQTIKEEKSKELIDEAQQPQIEQDQSIDGALIKDEVK--------AE 251
Query: 144 AEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRV 186
+ T K+L++K + + S V NR+
Sbjct: 252 NTTTTTTTATTATKTKKLITKEDLEILGKTISDYEWDKVLNRI 294
>gi|301028130|ref|ZP_07191403.1| gram-negative bacterial TonB protein [Escherichia coli MS 196-1]
gi|299878772|gb|EFI86983.1| gram-negative bacterial TonB protein [Escherichia coli MS 196-1]
Length = 242
Score = 35.3 bits (79), Expect = 9.3, Method: Composition-based stats.
Identities = 18/225 (8%), Positives = 51/225 (22%), Gaps = 20/225 (8%)
Query: 8 AISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGS 67
+S+ +H + L + Q++ + + +SV + D + + V
Sbjct: 17 LLSVCIHGAVVAGLLYTSVHQVIELPAPAQPISVTMVTPADIEPPQAVQPPPEPVVEPEP 76
Query: 68 SQ--------------ENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKES 113
E + + + + R +S A
Sbjct: 77 EPEPIPEPPKEAPVVIEKPKPKPKPKPKPVKKVQEQPKRDVKPVESRPASPFENTAPARL 136
Query: 114 ALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRI 173
+ + + + + + + K ++ + +I
Sbjct: 137 TSSTATAATSKPVTSVASGPRALSRNQPQYPARAQALRIEGQVKVKFDVTPDGRVDNVQI 196
Query: 174 PSQDAIAIVRNRVI---ANWNIPSDFKRFKKLRVKMHFQLNQKGF 215
S + V W + ++ G
Sbjct: 197 LSAKPANMFEREVKNAMRRWRYEPGKPGSG---IVVNILFKINGT 238
>gi|195161703|ref|XP_002021701.1| GL26649 [Drosophila persimilis]
gi|194103501|gb|EDW25544.1| GL26649 [Drosophila persimilis]
Length = 2957
Score = 35.3 bits (79), Expect = 9.3, Method: Composition-based stats.
Identities = 13/143 (9%), Positives = 38/143 (26%), Gaps = 2/143 (1%)
Query: 26 NVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRF 85
+ + P E + + K V + + + V++ +
Sbjct: 1395 SAKETSPPPANEKIPIIEAPVAPPTMVKAPPTLPAVKERSPTPAD--VKEKISVPAQVKE 1452
Query: 86 SDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAE 145
E + + + + +S ++ P ++ S G E
Sbjct: 1453 KTPVAVQEKEKDPVPAQIKEKTPSPPQSLPVKETTPPLPSKESSSPPEGSARRSGRREQE 1512
Query: 146 KKSIDTVVVRPDKKELLSKVEKS 168
+ P +++ L + +
Sbjct: 1513 PSPKKPLKEEPLREQGLPEPDDP 1535
>gi|313885787|ref|ZP_07819534.1| Gram-positive signal peptide protein, YSIRK family [Eremococcus
coleocola ACS-139-V-Col8]
gi|312619014|gb|EFR30456.1| Gram-positive signal peptide protein, YSIRK family [Eremococcus
coleocola ACS-139-V-Col8]
Length = 1154
Score = 35.3 bits (79), Expect = 9.4, Method: Composition-based stats.
Identities = 17/173 (9%), Positives = 40/173 (23%), Gaps = 4/173 (2%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPV 61
R+ G+A S+ + L P + + +
Sbjct: 25 RMTFGVA-SVAVAAGLLFAGG-TIASAEEAPAGGTPSEEISV--SGPASAEANGSDIGST 80
Query: 62 VQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVS 121
+ S E+ V + + D D E+ + + + E
Sbjct: 81 DEAATVSTESNVEEPKEEPAQDTVEDTQAQDTVEDTQAQDNVEQIEDVKDLQLSEAQKAR 140
Query: 122 PYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIP 174
D + + ++ D K +++ S +
Sbjct: 141 LRDAGYTDQEIASIEAEAKAKKQADENFDVDAFVAQKVAAKRQIQTRSAEPEL 193
>gi|302901454|ref|XP_003048441.1| hypothetical protein NECHADRAFT_105186 [Nectria haematococca mpVI
77-13-4]
gi|256729374|gb|EEU42728.1| hypothetical protein NECHADRAFT_105186 [Nectria haematococca mpVI
77-13-4]
Length = 787
Score = 35.3 bits (79), Expect = 9.4, Method: Composition-based stats.
Identities = 13/147 (8%), Positives = 42/147 (28%), Gaps = 3/147 (2%)
Query: 45 YNEDYHSSKYKKIEEPVVQFKGSSQ---ENLVRDFSVQENGDRFSDQTKTHATENETKRS 101
+ + + + Q E ++ ++ ++ ++ K
Sbjct: 227 PAKPQAPPERPAKTQAAPERSAKHQGSHERPPVRPPAEKPSEKTPEKPAEKPAPDQQKSK 286
Query: 102 SSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKEL 161
S+ + K A S + +K + E + + + V
Sbjct: 287 SNEFLQHLPKALATYIGVKSLNEHADTAKEWADWFMNIQKAPDELRDLSSKVTAAKDTID 346
Query: 162 LSKVEKSSRKRIPSQDAIAIVRNRVIA 188
+ ++R + D+ +R ++ +
Sbjct: 347 QIQTTITARPDLLEGDSADALRQQIES 373
>gi|1174732|sp|P46383|TONB_ENTAE RecName: Full=Protein tonB
gi|414743|emb|CAA48496.1| tonB [Enterobacter aerogenes]
Length = 243
Score = 35.3 bits (79), Expect = 9.4, Method: Composition-based stats.
Identities = 19/173 (10%), Positives = 45/173 (26%)
Query: 8 AISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGS 67
+S+ +H + L + Q++ S + + + + D + + V
Sbjct: 14 LLSVAIHGAVVAGLLYTSVHQVIEKPSPSQPIEITMVAPADLEPPQAAQPVVEPVVEPEP 73
Query: 68 SQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQK 127
E V +E + + K K E + PVSP++
Sbjct: 74 EPEPEVVPEPPKEVPVVIHKPEPKPKPKPKPKPKPEKKVEPKREVKPAEPRPVSPFENNN 133
Query: 128 ISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIA 180
+ A + + + ++ R +
Sbjct: 134 TAPARTAPSTTAATAKPMTTAPSVPKALKRGDPSYPQRAQALRIEGDVRVKFD 186
>gi|167767750|ref|ZP_02439803.1| hypothetical protein CLOSS21_02285 [Clostridium sp. SS2/1]
gi|167710489|gb|EDS21068.1| hypothetical protein CLOSS21_02285 [Clostridium sp. SS2/1]
Length = 1586
Score = 35.3 bits (79), Expect = 9.5, Method: Composition-based stats.
Identities = 22/174 (12%), Positives = 55/174 (31%), Gaps = 1/174 (0%)
Query: 83 DRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGIS 142
+ + K + + G + + P ++ + + K ++
Sbjct: 1391 EEITVNKKEEVIPPKKDPQQENPGSTEQQPTTEEPSKQQPTTQKPENSTSIKTNMTANVN 1450
Query: 143 FAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIAN-WNIPSDFKRFKK 201
K + + +K + IP I ++ +V + K+ KK
Sbjct: 1451 GVSYKVTKVENANNAQVSITKLDKKKTSITIPDYIMIKGIKCKVTSIEKKALYKGKKLKK 1510
Query: 202 LRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPST 255
+ + + Q+ G N+ + V + + +NA KA+ K ++
Sbjct: 1511 ITIGKNVQIIADNAFNGCKNLKSITIKSTVLKKVGKNAIKAIYKKATIKVPKKQ 1564
>gi|308185092|ref|YP_003929225.1| siderophore-mediated iron transport protein [Helicobacter pylori
SJM180]
gi|308061012|gb|ADO02908.1| siderophore-mediated iron transport protein [Helicobacter pylori
SJM180]
Length = 286
Score = 35.3 bits (79), Expect = 9.5, Method: Composition-based stats.
Identities = 28/260 (10%), Positives = 69/260 (26%), Gaps = 18/260 (6%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEE------ 59
IS L+ + YF P+++ V +SK K E
Sbjct: 18 SFLISFALYA--IGFGYFLLREDAPEPLAQAGTTKVTMSLASINTNSKVKTNAESAKPKE 75
Query: 60 ----PVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESAL 115
+ + + + + + + + + E
Sbjct: 76 EPKEKPKKEEPKKEVTKPKPKPKPKPKPKPKPKPEPKPKPKPKPEPKPEPKPEPKVEEPK 135
Query: 116 LRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPS 175
P K++ + ++ + ++ + +K + E + S
Sbjct: 136 KEEPKEEPKKEEAKEEAKEKSAPKQVTTKDIVKEKDKQEESNKTSEGATSEAQAYNPGVS 195
Query: 176 QDAIAIVRNRVIANWNIPSDFKRFK-KLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRM 234
+ + ++ + + P + + V + F +N G V V +
Sbjct: 196 NEFLMKIQTAISSKNRYPKMAQIRGIEGEVLVSFTINADGSVTDIKVVKSNTTD-----I 250
Query: 235 LRENARKAVIKSQAFRLSPS 254
L A +A+ + P
Sbjct: 251 LNHAALEAIKSAAYLFPKPE 270
>gi|298485115|ref|ZP_07003211.1| Glucans biosynthesis protein G precursor [Pseudomonas savastanoi
pv. savastanoi NCPPB 3335]
gi|298160367|gb|EFI01392.1| Glucans biosynthesis protein G precursor [Pseudomonas savastanoi
pv. savastanoi NCPPB 3335]
Length = 632
Score = 35.3 bits (79), Expect = 9.5, Method: Composition-based stats.
Identities = 21/189 (11%), Positives = 55/189 (29%), Gaps = 5/189 (2%)
Query: 10 SMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYK----KIEEPVVQFK 65
S+ V F+ + + +V+ + N ++ K + V
Sbjct: 439 SLAFLVDFVGPVLAALPEDKTIRSQVTTDDNVELVENNLRYNPVTKGYRLTLRVKVKDSG 498
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
++ + + E + + + KESA ++ ++ D
Sbjct: 499 KPTEMRAYLLREIPTEPGKEPALLVADKAEEKKAAAKEAAKPAVAKESANDQVEIAKADA 558
Query: 126 QKI-SKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRN 184
K + + G + A K + K + ++++ + P+ A
Sbjct: 559 PKPEAAKPETAKPEAGKADAAKGKGEVAKTDAAKDKDGKEIQQPETEAAPTHPEPAKTLQ 618
Query: 185 RVIANWNIP 193
+ W+
Sbjct: 619 VMTETWSYQ 627
>gi|227485475|ref|ZP_03915791.1| possible LPXTG anchored adhesin [Anaerococcus lactolyticus ATCC
51172]
gi|227236605|gb|EEI86620.1| possible LPXTG anchored adhesin [Anaerococcus lactolyticus ATCC
51172]
Length = 2025
Score = 35.3 bits (79), Expect = 9.6, Method: Composition-based stats.
Identities = 16/222 (7%), Positives = 57/222 (25%), Gaps = 7/222 (3%)
Query: 33 ISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTH 92
I+ ++ ++ K + + Q + + +
Sbjct: 1163 ITEADITVAEDGTVTVTKDGKTGTLAPEKTVKQKEVQNEFNPPKEPVKVDKIGELKPEEI 1222
Query: 93 ATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTV 152
A + + ++ ++ + ++ + ++ + +
Sbjct: 1223 AEIKKAVKDANPDRNFKDEDITVEADGTVKINQGGKVGTISADKTVVQKDTILDLTAPEK 1282
Query: 153 VVRPDKKELLSKVEKSSRKRIPSQDA-----IAIVRNRVIANWNIPSDFKRFK-KLRVKM 206
D L + + + A V N + K + + +
Sbjct: 1283 TEVRDTTNLTQEERDKVAAAVKKANEGKLSADAKVTVDDKGNVTVKDGTKNGTLEGKDTV 1342
Query: 207 HFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQA 248
+ ++ G + V T+ + ++ R+AV +
Sbjct: 1343 K-KFDRTGKEIKAPAKTKVANTDNLTDAEKQAVREAVKAANP 1383
>gi|186681379|ref|YP_001864575.1| hypothetical protein Npun_R0895 [Nostoc punctiforme PCC 73102]
gi|186463831|gb|ACC79632.1| hypothetical protein Npun_R0895 [Nostoc punctiforme PCC 73102]
Length = 386
Score = 35.3 bits (79), Expect = 9.6, Method: Composition-based stats.
Identities = 16/152 (10%), Positives = 45/152 (29%), Gaps = 1/152 (0%)
Query: 7 LAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKI-EEPVVQFK 65
+ S+ LH++ L+ + L P + + ++ I S K++ ++P +
Sbjct: 30 VIGSVSLHLLAFWLMRSSNAFSLWFPQQSQSAVPIELIDIAPQSKSTVKRVSQKPASITQ 89
Query: 66 GSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDK 125
S R + + ++ S ++ ++ + + +
Sbjct: 90 KSVSARSPRTTPRRNQDFDAINSADNLQQKSRIYASQPNRKQRVPTVTPKPTVTLKATAT 149
Query: 126 QKISKATNKEQDLQGISFAEKKSIDTVVVRPD 157
K + + + V P
Sbjct: 150 PKPTTTLKSTVTPKPTVTPKPTVTPKPTVTPK 181
>gi|254468846|ref|ZP_05082252.1| TonB family protein [beta proteobacterium KB13]
gi|207087656|gb|EDZ64939.1| TonB family protein [beta proteobacterium KB13]
Length = 232
Score = 35.3 bits (79), Expect = 9.7, Method: Composition-based stats.
Identities = 13/168 (7%), Positives = 50/168 (29%), Gaps = 6/168 (3%)
Query: 88 QTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKK 147
Q++ + K+ K E+ + + ++ + + +
Sbjct: 52 QSEPPQINEQPKKIDPPKPEKKPEPLKEIAPIQEEVFEELPEPIVEEISEYIEPEESNPT 111
Query: 148 SIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFK-KLRVKM 206
+ + +E + + + + + P + + + V +
Sbjct: 112 ESEESAPIEEVQEYIPPQPSPEVVKQATDSYTNQLTRAIAKQKKYPKIAQMRQWQGEVLL 171
Query: 207 HFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSPS 254
+ +++ +G ++ ++ ++L A V ++ F P
Sbjct: 172 NIEIDPQGNLVKADILEESR-----HKILNNEAIDMVKRASPFPQPPE 214
>gi|145351295|ref|XP_001420018.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580251|gb|ABO98311.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 870
Score = 35.3 bits (79), Expect = 9.7, Method: Composition-based stats.
Identities = 14/170 (8%), Positives = 45/170 (26%), Gaps = 1/170 (0%)
Query: 14 HVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLV 73
H + L N S+++ K K+ E + ++
Sbjct: 682 HALTALRALNNNPNAFSRARRPIVEFSIEDARAVRKLELKAKQREGQQKRAASKDEDKPR 741
Query: 74 -RDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKAT 132
+ + + + + + +A + +Q +
Sbjct: 742 GAEQAAKRVAKKEKAAGVAPKRPRDDANRAPKPTSRADADGDAKPRDKRGTKQQPSKPSG 801
Query: 133 NKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIV 182
+ LQ + A+++ + + +++ K +K ++
Sbjct: 802 GAPKMLQRAAEAKREDRNDARRKREREPESVKPKKKPHGADKRDRTDDLI 851
>gi|71657429|ref|XP_817230.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70882408|gb|EAN95379.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 937
Score = 35.3 bits (79), Expect = 9.7, Method: Composition-based stats.
Identities = 13/139 (9%), Positives = 42/139 (30%), Gaps = 3/139 (2%)
Query: 53 KYKKIEEPVVQFKGSSQENLV---RDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQA 109
+ + E R +E R ++Q + E + + + EQ
Sbjct: 137 EEAMRRAEQEEEARRRAEQEEMARRRAEQEEEARRRAEQEEEARRRAEQEEEARRRAEQE 196
Query: 110 LKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSS 169
+ + + + + + +G++ + + R +++E + +
Sbjct: 197 EEARRRAEQEGMARRRAEQEEEARRRAEQEGMARRRAEQEEEARRRAEQEEEARRRAEQE 256
Query: 170 RKRIPSQDAIAIVRNRVIA 188
+ + + R+R
Sbjct: 257 EEARRRAEQEEMARSRAEQ 275
>gi|308061913|gb|ADO03801.1| hypothetical protein HPCU_03175 [Helicobacter pylori Cuz20]
Length = 317
Score = 35.3 bits (79), Expect = 9.8, Method: Composition-based stats.
Identities = 29/284 (10%), Positives = 72/284 (25%), Gaps = 43/284 (15%)
Query: 6 GLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYN---------EDYHSSKYKK 56
L +S++LH L+YF F + S+ +++ VD + ++
Sbjct: 29 SLILSVLLH----WLIYFLFEHREDFFPSKPKLVKVDPKNLLILKRGHSQDPSKNTPGAP 84
Query: 57 IEEPVVQFKGSSQENLVRDFSVQENGDRFSDQT-------------KTHATENETKRSSS 103
K + + + ++ + K A + K
Sbjct: 85 KPTLAGPQKPPTPPTPPIPPTPPKPIEKPKPEPKPKPKPEPKKPNHKHKALKKVEKVEEK 144
Query: 104 SKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLS 163
E+ +E ++ V ++ + Q ++ +
Sbjct: 145 KVVEEKKEEKKIVEQKVEQKKIEEKKPVKKEFDPNQLSFLPKEVAPPRQENNKGLDNQTR 204
Query: 164 KVEKSSRKR---IPSQDAIAIVRNRVIANWNIPS--------DFKRFKKLRVKMHFQLNQ 212
+ +RN + I + + F L+
Sbjct: 205 RDIDELYGEEFGDLGTAEKDFIRNNLRDIGRITQKYLEYPQVAAYLGQDGTNAVEFYLHP 264
Query: 213 KGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQA-FRLSPST 255
G + + +ML +N K + + + +
Sbjct: 265 NGDISDLKIIIGS-----EYKMLDDNTLKTIQIAYKDYPRPKTK 303
>gi|303327752|ref|ZP_07358192.1| putative ferric siderophore transporter, periplasmic energy
transduction protein TonB [Desulfovibrio sp. 3_1_syn3]
gi|302862113|gb|EFL85047.1| putative ferric siderophore transporter, periplasmic energy
transduction protein TonB [Desulfovibrio sp. 3_1_syn3]
Length = 316
Score = 35.3 bits (79), Expect = 9.8, Method: Composition-based stats.
Identities = 20/246 (8%), Positives = 52/246 (21%), Gaps = 10/246 (4%)
Query: 2 RLENGLAISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPV 61
R G +S LH L + + V + D +
Sbjct: 49 RAWKGWLLSCCLHFCLLGGI---LAFAAYQVEKEEPVYRVALVALGDMSPAGTGAGLPGG 105
Query: 62 VQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVS 121
+ + + ++ + + A +
Sbjct: 106 TRGGAPDTAPVQDPGPPPAPAAEPAAGKNAVTHKSADTPHPVAPAKTRSPGKAAGKNEKR 165
Query: 122 PYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAI-- 179
P + + S + ++ + + + S +
Sbjct: 166 PTAPPQERMPSPAGPLTPQASGGQAATVPAGSAGTGTRHDTAASSAGTGGSGGSGLYMPG 225
Query: 180 --AIVRNRVIANWNIPSDFKRFKKL--RVKMHFQLNQKGFVLGKINVDVVGGTELVRRML 235
+ + + + K++ RV + ++ G V +
Sbjct: 226 QLDHLPSVLRPAKPDYPPDAKKKRIEGRVVVRLIVDSTGRPTEC-AVHAAEPSGYFEEAA 284
Query: 236 RENARK 241
ARK
Sbjct: 285 LGAARK 290
>gi|298251540|ref|ZP_06975343.1| putative FHA domain containing protein [Ktedonobacter racemifer DSM
44963]
gi|297546132|gb|EFH80000.1| putative FHA domain containing protein [Ktedonobacter racemifer DSM
44963]
Length = 735
Score = 35.3 bits (79), Expect = 9.8, Method: Composition-based stats.
Identities = 18/157 (11%), Positives = 35/157 (22%), Gaps = 13/157 (8%)
Query: 36 REMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVR---DFSVQENGD----RFSDQ 88
+ S + E S K + Q + +
Sbjct: 120 QPPDSAEKKTTETPLSPPKKPARTSTPAPASADQSPAQPFERPAAPPKKPARTSTPAPAS 179
Query: 89 TKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKE------QDLQGIS 142
+ + ++ K A SP + A K+ L
Sbjct: 180 ADQSPAQPFERPAAPPKKPARTSTPAPASADQSPAQPFERPAAPPKKPARTSTPALASAD 239
Query: 143 FAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAI 179
+ + + P K S +S + P+Q
Sbjct: 240 QSPAQPFERPAAPPKKPARTSTPAPASADQSPAQPFE 276
>gi|292669486|ref|ZP_06602912.1| ferric siderophore transporter [Selenomonas noxia ATCC 43541]
gi|292648849|gb|EFF66821.1| ferric siderophore transporter [Selenomonas noxia ATCC 43541]
Length = 244
Score = 35.3 bits (79), Expect = 9.8, Method: Composition-based stats.
Identities = 14/100 (14%), Positives = 23/100 (23%), Gaps = 24/100 (24%)
Query: 171 KRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTEL 230
P + A +R+ + + V + + G V G
Sbjct: 153 SAPPRERVEASLRSEAKPEY-PQELIDDDVEGTVTIKILVAADGSVEAVNVESSSG---- 207
Query: 231 VRRMLRENARKAVIKSQAFRLSPSTYKSWRNITLFFVPSK 270
R + + A A WR F P
Sbjct: 208 -YRAMDQAAIAA---------------GWR---FQFNPGD 228
>gi|306813724|ref|ZP_07447905.1| transport protein TonB [Escherichia coli NC101]
gi|305852998|gb|EFM53443.1| transport protein TonB [Escherichia coli NC101]
gi|312945887|gb|ADR26714.1| transport protein TonB [Escherichia coli O83:H1 str. NRG 857C]
Length = 244
Score = 35.3 bits (79), Expect = 9.9, Method: Composition-based stats.
Identities = 17/225 (7%), Positives = 52/225 (23%), Gaps = 20/225 (8%)
Query: 8 AISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKK----------- 56
+S+ +H + L + Q++ + + +SV + D + +
Sbjct: 19 LLSVCIHGAVVAGLLYTSVHQVIELPAPAQPISVTMVAPADLEPPQAVQPPPEPVVEPEP 78
Query: 57 ---IEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKES 113
+ + E + + + + R +S A
Sbjct: 79 EPELIPEPPKEAPVVIEKPKPKPKPKPKPVKKVQEQPKRDVKPVESRPASPFENTAPARP 138
Query: 114 ALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRI 173
+ + + + + + + K ++ + +I
Sbjct: 139 TSSTATAATSKPVTSVASGPRALSRNQPQYPARAQALRIEGQVKVKFDVTPDGRVDNVQI 198
Query: 174 PSQDAIAIVRNRVI---ANWNIPSDFKRFKKLRVKMHFQLNQKGF 215
S + V W + ++ G
Sbjct: 199 LSAKPANMFEREVKNAMRRWRYEPGKPGSG---IVVNILFKINGT 240
>gi|238810172|dbj|BAH69962.1| hypothetical protein [Mycoplasma fermentans PG18]
Length = 796
Score = 35.3 bits (79), Expect = 9.9, Method: Composition-based stats.
Identities = 8/139 (5%), Positives = 36/139 (25%)
Query: 75 DFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNK 134
+ + E +T+ + + + + + + V +A
Sbjct: 653 EEAEIEEKKNQKVETQKIEEDAKETITEIKEEVVPETKVEEQNIKVEEVKNPSAQQAQPN 712
Query: 135 EQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRNRVIANWNIPS 194
+ ++ + + + + + + + P++ + + N
Sbjct: 713 QPKFNLNKPQDQYQQTSRLRQVNPNMYQNVQYPNQYQNFPNKGYVDPRFAQYPPRQNPYY 772
Query: 195 DFKRFKKLRVKMHFQLNQK 213
+ + + V N
Sbjct: 773 PNQNYTNINVAQRQPQNPN 791
>gi|169342446|ref|ZP_02863507.1| TcpH [Clostridium perfringens C str. JGS1495]
gi|169299445|gb|EDS81510.1| TcpH [Clostridium perfringens C str. JGS1495]
Length = 830
Score = 35.3 bits (79), Expect = 9.9, Method: Composition-based stats.
Identities = 17/140 (12%), Positives = 38/140 (27%), Gaps = 3/140 (2%)
Query: 29 LLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQ 88
VP E SV+ I + K +E + S + + +
Sbjct: 694 TEVPEDLVEEKSVEAIN---KAKNDVKANKEKINNDINSKNTEINPEAKENIEVASSPEV 750
Query: 89 TKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKS 148
T+ + + + G+ K ++ ++ + I EK
Sbjct: 751 TEIKKKSTKKVENIKNNGKPKEKSPDKKQIKEVSTKERVERVKSFMGVSNNDIKSKEKHL 810
Query: 149 IDTVVVRPDKKELLSKVEKS 168
+ + K ++S
Sbjct: 811 ENKLEYIKKGNSKNFKKKES 830
>gi|331662664|ref|ZP_08363587.1| membrane protein [Escherichia coli TA143]
gi|331061086|gb|EGI33050.1| membrane protein [Escherichia coli TA143]
Length = 239
Score = 35.3 bits (79), Expect = 9.9, Method: Composition-based stats.
Identities = 18/225 (8%), Positives = 51/225 (22%), Gaps = 20/225 (8%)
Query: 8 AISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGS 67
+S+ +H + L + Q++ + + +SV + D + + V
Sbjct: 14 LLSVCIHGAVVAGLLYTSVHQVIELPAPAQPISVTMVAPADLEPPQAVQPPPEPVVEAEP 73
Query: 68 SQ--------------ENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKES 113
E + + + + R +S A
Sbjct: 74 EPEPIPEPPKEAPVVIEKPKPKPKPKPKPVKKVQEQPKRDVKPVESRPASPFENTAPARP 133
Query: 114 ALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRI 173
+ + + + + + + K ++ + +I
Sbjct: 134 TSSTATAATSKPVTSVASGPRALSRNQPQYPARAQALRIEGQVKVKFDVTPDGRVDNVQI 193
Query: 174 PSQDAIAIVRNRVI---ANWNIPSDFKRFKKLRVKMHFQLNQKGF 215
S + V W + ++ G
Sbjct: 194 LSAKPANMFEREVKNAMRRWRYEPGKPGSG---IVVNILFKINGT 235
>gi|326668188|ref|XP_699475.5| PREDICTED: symplekin [Danio rerio]
Length = 1248
Score = 35.3 bits (79), Expect = 9.9, Method: Composition-based stats.
Identities = 16/163 (9%), Positives = 39/163 (23%), Gaps = 9/163 (5%)
Query: 13 LHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENL 72
H+ ++ + P + E+ + + + K+ + PV Q + + + +
Sbjct: 1086 AHIPTSIMTVLEATNRKPEPEPQPEIQHPEVMEEREVPLPKHISVHAPVQQAEPPAPKPI 1145
Query: 73 VRDFSVQEN---------GDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPY 123
V + R E E + + +P
Sbjct: 1146 VFTEPMPPQEKHHHHHQVPSRREVAEVAEPMEQEETAHVPEEDTSEAPPQQMDVSEEAPQ 1205
Query: 124 DKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVE 166
KA + E + + S +
Sbjct: 1206 SSPVAEKADESMDESTAGPADEAEEPVEEPEEEHAETGESSAD 1248
>gi|288800699|ref|ZP_06406156.1| putative TPR domain protein [Prevotella sp. oral taxon 299 str.
F0039]
gi|288332160|gb|EFC70641.1| putative TPR domain protein [Prevotella sp. oral taxon 299 str.
F0039]
Length = 1116
Score = 35.3 bits (79), Expect = 9.9, Method: Composition-based stats.
Identities = 12/183 (6%), Positives = 32/183 (17%), Gaps = 19/183 (10%)
Query: 12 ILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQE- 70
+LH Y F + + + + + + S +
Sbjct: 900 LLHSGLGYEAYEKFYNKHFSTAKLPP---ITLLNEPSSITIAKELDNNKTEEAPKESVDN 956
Query: 71 -----NLVRDFSVQENGDRFSDQTKTHATENE----------TKRSSSSKGEQALKESAL 115
L + + + T + + ++
Sbjct: 957 GATVIPLEPELVAPKTETIIPLEEIKEQTPLQGNQQGSTTVIIEDEKPQPKASTSNDTKK 1016
Query: 116 LRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPS 175
+ + K P K+E +
Sbjct: 1017 ETKATPAPTTKGKQHQNTATKQPTATKPTTKAPQQQPKKLPAKEETTTTRTGIYFGDGFG 1076
Query: 176 QDA 178
+ A
Sbjct: 1077 EPA 1079
>gi|158336791|ref|YP_001517965.1| hypothetical protein AM1_3659 [Acaryochloris marina MBIC11017]
gi|158307032|gb|ABW28649.1| hypothetical protein AM1_3659 [Acaryochloris marina MBIC11017]
Length = 521
Score = 35.3 bits (79), Expect = 9.9, Method: Composition-based stats.
Identities = 19/177 (10%), Positives = 44/177 (24%), Gaps = 4/177 (2%)
Query: 47 EDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKG 106
+ + V Q S QE ++ + QT + +T S+
Sbjct: 296 KAQKPPPTSVQNQQVPQQSPSPQEEILSEQKAPAPVASAPAQTSKSVPQAKTLPPSAPHA 355
Query: 107 EQALKESALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVE 166
+ + + P + + N E DL + + +
Sbjct: 356 KTSRPPAVTSPAPAAEPAPASTADTINAESDLLETDNLSRNRRTPEDRTLNSFGRQAPGN 415
Query: 167 KSSRKRIPSQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVD 223
+ + +R W +P + + L G + ++
Sbjct: 416 TEAAFIPSTSVPAQNIRQYFKQRWQVPPGLTQP----LPYQLTLKANGSLKQVTPLN 468
>gi|74312398|ref|YP_310817.1| transport protein TonB [Shigella sonnei Ss046]
gi|218553804|ref|YP_002386717.1| transport protein TonB [Escherichia coli IAI1]
gi|218704775|ref|YP_002412294.1| transport protein TonB [Escherichia coli UMN026]
gi|73855875|gb|AAZ88582.1| TonB [Shigella sonnei Ss046]
gi|218360572|emb|CAQ98131.1| membrane spanning protein in TonB-ExbB-ExbD complex [Escherichia
coli IAI1]
gi|218431872|emb|CAR12758.1| membrane spanning protein in TonB-ExbB-ExbD complex [Escherichia
coli UMN026]
gi|323168426|gb|EFZ54107.1| protein tonB [Shigella sonnei 53G]
gi|327253942|gb|EGE65571.1| protein tonB [Escherichia coli STEC_7v]
Length = 239
Score = 35.3 bits (79), Expect = 9.9, Method: Composition-based stats.
Identities = 18/225 (8%), Positives = 51/225 (22%), Gaps = 20/225 (8%)
Query: 8 AISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGS 67
+S+ +H + L + Q++ + + +SV + D + + V
Sbjct: 14 LLSVCIHGAVVAGLLYTSVHQVIELPAPAQPISVTMVAPADLEPPQAVQPPPEPVVEPEP 73
Query: 68 SQ--------------ENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKES 113
E + + + + R +S A
Sbjct: 74 EPEPIPEPPKEAPVVIEKPKPKPKPKPKPVKKVQEQPKRDVKPVESRPASPFENTAPARP 133
Query: 114 ALLRMPVSPYDKQKISKATNKEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRI 173
+ + + + + + + K ++ + +I
Sbjct: 134 TSSTATAATSKPVTSVASGPRALSRNQPQYPARAQALRIEGQVKVKFDVTPDGRVDNVQI 193
Query: 174 PSQDAIAIVRNRVI---ANWNIPSDFKRFKKLRVKMHFQLNQKGF 215
S + V W + ++ G
Sbjct: 194 LSAKPANMFEREVKNAMRRWRYEPGKPGSG---IVVNILFKINGT 235
>gi|75906319|ref|YP_320615.1| surface antigen variable number [Anabaena variabilis ATCC 29413]
gi|75700044|gb|ABA19720.1| Surface antigen variable number [Anabaena variabilis ATCC 29413]
Length = 838
Score = 35.3 bits (79), Expect = 9.9, Method: Composition-based stats.
Identities = 23/222 (10%), Positives = 51/222 (22%), Gaps = 25/222 (11%)
Query: 24 NFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGSSQENLVRDFSVQENGD 83
N + P+ + + + +P V + + + +
Sbjct: 159 NLPSPVPNPLDTGA------TTAKQLVQAPEQPAPQPEVAPPSTEEPAPAPETTPGTENF 212
Query: 84 RFSDQTKTHATENETKRSSSSKGEQALKESALL--------RMPVSPYDKQKISKATN-- 133
+ T + + L P + ++ + N
Sbjct: 213 NTPNATPETTEPRVLVSEVLVRPQSGQLTPELEAQVYNVIRTQPGRTTTRSQLQEDINAI 272
Query: 134 ---------KEQDLQGISFAEKKSIDTVVVRPDKKELLSKVEKSSRKRIPSQDAIAIVRN 184
+ I K E+ + + +P A I R
Sbjct: 273 FGTGFFSNVQASPEDTPLGVRVSFIVQPNPVLSKVEIQANPGTNVPSVLPQATADEIFRP 332
Query: 185 RVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVG 226
+ N+ + K+L + Q V+G V G
Sbjct: 333 QYGKILNLRDLQEGIKELTKRYQDQGYVLANVVGAPQVSENG 374
>gi|16765081|ref|NP_460696.1| transport protein TonB [Salmonella enterica subsp. enterica serovar
Typhimurium str. LT2]
gi|197263464|ref|ZP_03163538.1| protein TonB [Salmonella enterica subsp. enterica serovar Saintpaul
str. SARA23]
gi|205358093|ref|ZP_02575733.2| protein TonB [Salmonella enterica subsp. enterica serovar
4,[5],12:i:- str. CVM23701]
gi|401197|sp|P25945|TONB_SALTY RecName: Full=Protein tonB
gi|47932|emb|CAA39818.1| tonB protein [Salmonella enterica subsp. enterica serovar
Typhimurium]
gi|16420268|gb|AAL20655.1| TonB [Salmonella enterica subsp. enterica serovar Typhimurium str.
LT2]
gi|197241719|gb|EDY24339.1| protein TonB [Salmonella enterica subsp. enterica serovar Saintpaul
str. SARA23]
gi|205327534|gb|EDZ14298.1| protein TonB [Salmonella enterica subsp. enterica serovar
4,[5],12:i:- str. CVM23701]
gi|261246926|emb|CBG24743.1| TonB protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. D23580]
gi|301158264|emb|CBW17763.1| TonB protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. SL1344]
gi|321224367|gb|EFX49430.1| Ferric siderophore transport system, periplasmic binding protein
TonB [Salmonella enterica subsp. enterica serovar
Typhimurium str. TN061786]
gi|323130009|gb|ADX17439.1| transport protein TonB [Salmonella enterica subsp. enterica serovar
Typhimurium str. 4/74]
gi|332988626|gb|AEF07609.1| transport protein TonB [Salmonella enterica subsp. enterica serovar
Typhimurium str. UK-1]
Length = 242
Score = 35.3 bits (79), Expect = 9.9, Method: Composition-based stats.
Identities = 25/230 (10%), Positives = 60/230 (26%), Gaps = 21/230 (9%)
Query: 8 AISMILHVMFLLLLYFNFNVQLLVPISRREMLSVDNIYNEDYHSSKYKKIEEPVVQFKGS 67
+S+ +H + L + Q++ + + ++V + D + + V
Sbjct: 14 LLSVGIHGAVVAGLLYTSVHQVIELPAPAQPITVTMVSPADLEPPQAVQPPPEPVVEPEP 73
Query: 68 SQENLVRDFSVQENGDRFSDQTKTHATENETKRSSSSKGEQALKESALLRMPVSPYDKQK 127
E +E + + K + + + P SP++
Sbjct: 74 EPEPEPIPEPPKEAPVVIEKPKPKPKPKPKPKPVKKVEEQPKREVKPAAPRPASPFENSA 133
Query: 128 ISKATNKEQDLQGISF-----------------AEKKSIDTVVVRPDKKELLSKVEKSSR 170
+ T+ + + R K ++ +
Sbjct: 134 PVRPTSSTASATSKPAVSVPTGPRALSRNQPQYPARAQALRIEGRVKVKFDVTSAGRVEN 193
Query: 171 KRIPSQDAIAIVRNRVI---ANWNIPSDFKRFKKLRVKMHFQLNQKGFVL 217
+I S + V W + L V + F+LN +
Sbjct: 194 VQILSAQPANMFEREVKNAMRKWRYEAGKPGS-GLVVNIIFRLNGTAQIE 242
Database: nr
Posted date: May 22, 2011 12:22 AM
Number of letters in database: 999,999,966
Number of sequences in database: 2,987,313
Database: /data/usr2/db/fasta/nr.01
Posted date: May 22, 2011 12:30 AM
Number of letters in database: 999,999,796
Number of sequences in database: 2,903,041
Database: /data/usr2/db/fasta/nr.02
Posted date: May 22, 2011 12:36 AM
Number of letters in database: 999,999,281
Number of sequences in database: 2,904,016
Database: /data/usr2/db/fasta/nr.03
Posted date: May 22, 2011 12:41 AM
Number of letters in database: 999,999,960
Number of sequences in database: 2,935,328
Database: /data/usr2/db/fasta/nr.04
Posted date: May 22, 2011 12:46 AM
Number of letters in database: 842,794,627
Number of sequences in database: 2,394,679
Lambda K H
0.303 0.115 0.268
Lambda K H
0.267 0.0348 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,191,620,323
Number of Sequences: 14124377
Number of extensions: 34382754
Number of successful extensions: 285562
Number of sequences better than 10.0: 10000
Number of HSP's better than 10.0 without gapping: 6676
Number of HSP's successfully gapped in prelim test: 5435
Number of HSP's that attempted gapping in prelim test: 250370
Number of HSP's gapped (non-prelim): 26634
length of query: 271
length of database: 4,842,793,630
effective HSP length: 137
effective length of query: 134
effective length of database: 2,907,753,981
effective search space: 389639033454
effective search space used: 389639033454
T: 11
A: 40
X1: 16 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.1 bits)
S2: 79 (35.3 bits)