HHsearch alignment for GI: 254780551 and conserved domain: PRK06926
>PRK06926 flagellar motor protein MotP; Reviewed.
Probab=99.16 E-value=3.2e-08 Score=67.76 Aligned_cols=108 Identities=14% Similarity=0.179 Sum_probs=81.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999998287125678643049999999999999999641135301677777999999999999999
Q gi|254780551|r 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVS 189 (230)
Q Consensus 110 ~e~i~~~le~~~~~e~~~l~~~l~~L~ti~s~AP~lGLlGTV~Gmi~aF~~ia~~g~~~~~~a~GIseALitTa~GL~VA 189 (230)
T Consensus 126 ~~~i~~iLe~ei~~~~~r~~~~~~~~~~~g~~aPafGmiGTviGLI~mL~~l~---d-p~~iG~~mAvALvtTlYGv~lA 201 (272)
T PRK06926 126 EETIRDVMDSEIAAMEERHRKGRRLFEKAGEFAPAWGMIGTLVGLVLMLKNLN---D-PHTLGPNMAVALLTTLYGTLLA 201 (272)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC---C-HHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999998888999999987258879999999999988169---9-9999888899999999999999
Q ss_pred H-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9-9999999999999999999999999999999
Q gi|254780551|r 190 I-PSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221 (230)
Q Consensus 190 I-Pa~~~yn~l~~rv~~~~~~le~~a~~~~~~l 221 (230)
T Consensus 202 n~~f~PiA~KL~~~~~~e~~~~~miieGil~I~ 234 (272)
T PRK06926 202 NLVFIPIAAKLEEKTESEIFIKQVMIEGIIGVQ 234 (272)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999988999999888999999899999999987