HHsearch alignment for GI: 254780551 and conserved domain: TIGR02797
>TIGR02797 exbB tonB-system energizer ExbB; InterPro: IPR014164 This entry describes ExbB proteins, part of the MotA/TolQ/ExbB protein family. The paired proteins MotA and MotB, TolQ and TolR, and ExbB and ExbD harness the proton-motive force to drive the flagellar motor, energize the Tol-Pal system, or energize TonB, respectively. Tol-Pal and TonB are both active at the outer membrane. Genomes may have many different TonB-dependent receptors, of which many of those characterised are involved in siderophore transport across the outer membrane..
Probab=100.00 E-value=0 Score=331.62 Aligned_cols=211 Identities=23% Similarity=0.410 Sum_probs=196.6
Q ss_pred CHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHH
Q ss_conf 69999983888799999999999999999999999999999754699999862289978999982027823799999999
Q gi|254780551|r 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSA 91 (230)
Q Consensus 12 sl~~l~~~gg~~v~~Vm~~L~i~Si~~~~iiier~~~~~~~~~~~~~f~~~~~~~~~l~~~~~~l~~~~~~~~~~i~~~~ 91 (230)
T Consensus 1 SPwgMF~~AD~vVK~VMigLa~AS~~TWti~~aK~~El~~~~~R~~~~~~~l~~~~~L~~a~~~~~~~~-~~~~~lv~~A 79 (213)
T TIGR02797 1 SPWGMFLAADIVVKAVMIGLALASLVTWTIFIAKSVELARAKRRLKRALKALEEARTLAEAQEALEDKG-GVAAALVRAA 79 (213)
T ss_pred CCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-CHHHHHHHHH
T ss_conf 942021415502688999999999999999999999999988999999999997761899999875037-7799999999
Q ss_pred HHHHHHHHC-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH-
Q ss_conf 997744310-256892338999999999999999999982871256786430499999999999999996411353016-
Q gi|254780551|r 92 MSEWKKSCD-KGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV- 169 (230)
Q Consensus 92 ~~~~~~~~~-~~~~~~~~~~e~i~~~le~~~~~e~~~l~~~l~~L~ti~s~AP~lGLlGTV~Gmi~aF~~ia~~g~~~~- 169 (230)
T Consensus 80 ~~E~~lS~~~l~~~~~~G~kERv~~~L~r~e~~~gR~~~~GtG~LATIGa~aPFVGLFGTVWGIMnsFigIs~~qTTnLA 159 (213)
T TIGR02797 80 EEELELSAAVLALSDDEGIKERVASRLERIEAAAGRRMSRGTGVLATIGATAPFVGLFGTVWGIMNSFIGISKAQTTNLA 159 (213)
T ss_pred HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCHHCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 99999769986113357614688999999999833000036872031200125322210277588788876665220400
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 777779999999999999999999999999999999999999999999999999
Q gi|254780551|r 170 VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223 (230)
Q Consensus 170 ~~a~GIseALitTa~GL~VAIPa~~~yn~l~~rv~~~~~~le~~a~~~~~~l~r 223 (230)
T Consensus 160 VVAPGIAEALLATA~GLVAAIPAVvIYN~faR~i~~y~~~laDa~a~v~rLvSR 213 (213)
T TIGR02797 160 VVAPGIAEALLATALGLVAAIPAVVIYNVFARSIAGYRALLADASAQVERLVSR 213 (213)
T ss_pred EECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 035237899999998899885489888658756999999999999999974049