HHsearch alignment for GI: 254780551 and conserved domain: TIGR02805
>TIGR02805 exbB2 tonB-system energizer ExbB; InterPro: IPR014172 Members of this protein family appear to be the ExbB protein of an ExbBD proton-transporting membrane complex that, by means of TonB, energizes transport by TonB-dependent receptors. Note that this family represents one of at least two distinct groups TolQ homologues designated ExbB - see also IPR014164 from INTERPRO. Each group associates with a distinct group of ExbD proteins, and a single species may have two ExbB/ExbD/TonB systems..
Probab=99.95 E-value=3.8e-27 Score=180.27 Aligned_cols=122 Identities=21% Similarity=0.425 Sum_probs=101.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 99999999999999999999999999975469999986228997899998202782379999999999774431025689
Q gi|254780551|r 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARS 105 (230)
Q Consensus 26 ~Vm~~L~i~Si~~~~iiier~~~~~~~~~~~~~f~~~~~~~~~l~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 105 (230)
T Consensus 10 ~IfgiLg~Ms~iala~viER~Lf~rki~v----------------------~~Y~~------------------------ 43 (139)
T TIGR02805 10 IIFGILGLMSLIALAYVIERYLFYRKIKV----------------------KRYED------------------------ 43 (139)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCH----------------------HCCCC------------------------
T ss_conf 99999999999999999999898740221----------------------02146------------------------
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC-CHH-HHHHHHHHHHHHHH
Q ss_conf 2338999999999999999999982871256786430499999999999999996411353-016-77777999999999
Q gi|254780551|r 106 PIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYS-NNV-VSIPGIIESLISIL 183 (230)
Q Consensus 106 ~~~~~e~i~~~le~~~~~e~~~l~~~l~~L~ti~s~AP~lGLlGTV~Gmi~aF~~ia~~g~-~~~-~~a~GIseALitTa 183 (230)
T Consensus 44 ----~~----qld-------~dl~~NlT~isiIgsNAPYiGLLGTVIGImvTFY~~G~gggdID~~~i~~gLSLALKATA 108 (139)
T TIGR02805 44 ----VE----QLD-------DDLSRNLTVISIIGSNAPYIGLLGTVIGIMVTFYEMGLGGGDIDVKAILVGLSLALKATA 108 (139)
T ss_pred ----HH----HHH-------HHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf ----67----899-------988532041122500255012557899999988863256676451154556128999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999999999999999999999
Q gi|254780551|r 184 LGLCVSIPSSIAYNKFIEDSKKFAM 208 (230)
Q Consensus 184 ~GL~VAIPa~~~yn~l~~rv~~~~~ 208 (230)
T Consensus 109 LGlLVAIP~l~~YnallRkV~v~~~ 133 (139)
T TIGR02805 109 LGLLVAIPALVVYNALLRKVEVLRA 133 (139)
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHH
T ss_conf 7799998999997201205567666