BLASTP 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= gi|254780551|ref|YP_003064964.1| tolQ protein [Candidatus
Liberibacter asiaticus str. psy62]
(230 letters)
Database: nr
14,124,377 sequences; 4,842,793,630 total letters
Searching..................................................done
Results from round 1
>gi|254780551|ref|YP_003064964.1| tolQ protein [Candidatus Liberibacter asiaticus str. psy62]
gi|254040228|gb|ACT57024.1| tolQ protein [Candidatus Liberibacter asiaticus str. psy62]
Length = 230
Score = 463 bits (1191), Expect = e-128, Method: Compositional matrix adjust.
Identities = 230/230 (100%), Positives = 230/230 (100%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE
Sbjct: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
Query: 61 QLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVA 120
QLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVA
Sbjct: 61 QLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVA 120
Query: 121 IARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLI 180
IARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLI
Sbjct: 121 IARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLI 180
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS
Sbjct: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
>gi|315122878|ref|YP_004063367.1| tolQ protein [Candidatus Liberibacter solanacearum CLso-ZC1]
gi|313496280|gb|ADR52879.1| tolQ protein [Candidatus Liberibacter solanacearum CLso-ZC1]
Length = 213
Score = 306 bits (785), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 164/212 (77%), Positives = 195/212 (91%)
Query: 18 MQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLK 77
MQMGLAVKC+I LL +FSI SWS+I+QK VNFI +RR FREFEQLFWSGQSLE++CK LK
Sbjct: 1 MQMGLAVKCVIILLLVFSIFSWSIIVQKIVNFIMIRRNFREFEQLFWSGQSLESLCKLLK 60
Query: 78 NHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGS 137
+ HN+GLAAIFMSAM EWKKS ++GARS IG+QDRIDRMMDVAIARELE+ITE+LSFLG+
Sbjct: 61 DKHNVGLAAIFMSAMCEWKKSYEQGARSSIGMQDRIDRMMDVAIARELEDITERLSFLGT 120
Query: 138 MSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYN 197
MSS GLLVG+LGAVLGM+GFFQ+IAG ++N + IP IIESL+SI+LGLCVSIPSSIAYN
Sbjct: 121 MSSVGLLVGLLGAVLGMVGFFQNIAGPHANIIFFIPEIIESLMSIILGLCVSIPSSIAYN 180
Query: 198 KFIEDSKKFAMQMEGFANEFSAILSRQTEGNI 229
KF+ED+KKF++QMEGF++EFSAILSRQTEG++
Sbjct: 181 KFMEDAKKFSVQMEGFSDEFSAILSRQTEGHV 212
>gi|332716446|ref|YP_004443912.1| biopolymer transport protein tolQ [Agrobacterium sp. H13-3]
gi|325063131|gb|ADY66821.1| biopolymer transport protein tolQ [Agrobacterium sp. H13-3]
Length = 239
Score = 243 bits (621), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 120/229 (52%), Positives = 163/229 (71%), Gaps = 3/229 (1%)
Query: 1 MNNYGLA--IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFRE 58
M GLA D+S++ALFMQ GL VK ++ L S+ +W+++ K V+F +RQF +
Sbjct: 1 MEQAGLAAATHDVSLWALFMQAGLIVKFVMIGLIAASVWTWAIVFDKYVSFGKAKRQFDQ 60
Query: 59 FEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMD 118
FEQ+FWSGQSLE + ++L N+GLAAIF+SAM EWKKS ++GARSPIG+Q RIDR MD
Sbjct: 61 FEQVFWSGQSLEELYRTLAERQNVGLAAIFVSAMREWKKSFERGARSPIGLQMRIDRAMD 120
Query: 119 VAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIE 177
V IARE E+ +L L ++ SAG +G+ G V+G+M FQ+IAG S N+ V PGI E
Sbjct: 121 VTIAREGEQYEARLGSLATIGSAGPFIGLFGTVVGIMTSFQAIAGSKSTNLAVVAPGIAE 180
Query: 178 SLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+L++ +GL +IP+ IAYNKF D+ K + +MEGFA+EFSAILSRQ +
Sbjct: 181 ALLATAIGLVAAIPAVIAYNKFTADAHKLSARMEGFADEFSAILSRQID 229
>gi|159185874|ref|NP_356903.2| tolQ protein [Agrobacterium tumefaciens str. C58]
gi|159141008|gb|AAK89688.2| tolQ Protein [Agrobacterium tumefaciens str. C58]
Length = 239
Score = 241 bits (616), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 119/229 (51%), Positives = 162/229 (70%), Gaps = 3/229 (1%)
Query: 1 MNNYGLA--IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFRE 58
M GLA D+S++ALFMQ G VK ++ L S+ +W+++ K V+F +RQF +
Sbjct: 1 MEQAGLAAATHDVSLWALFMQAGFIVKFVMIGLIAASVWTWAIVFDKYVSFGKAKRQFDQ 60
Query: 59 FEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMD 118
FEQ+FWSGQSLE + ++L N+GLAAIF+SAM EWKKS ++GARSPIG+Q RIDR MD
Sbjct: 61 FEQVFWSGQSLEELYRTLAERQNVGLAAIFVSAMREWKKSFERGARSPIGLQMRIDRAMD 120
Query: 119 VAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIE 177
V IARE E+ +L L ++ SAG +G+ G V+G+M FQ+IAG S N+ V PGI E
Sbjct: 121 VTIAREGEQYEARLGSLATIGSAGPFIGLFGTVVGIMTSFQAIAGSKSTNLAVVAPGIAE 180
Query: 178 SLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+L++ +GL +IP+ IAYNKF D+ K + +MEGFA+EFSAILSRQ +
Sbjct: 181 ALLATAIGLVAAIPAVIAYNKFTADAHKLSARMEGFADEFSAILSRQID 229
>gi|222149660|ref|YP_002550617.1| protein TolQ [Agrobacterium vitis S4]
gi|221736642|gb|ACM37605.1| protein TolQ [Agrobacterium vitis S4]
Length = 239
Score = 238 bits (608), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 119/229 (51%), Positives = 162/229 (70%), Gaps = 3/229 (1%)
Query: 1 MNNYGLAIM--DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFRE 58
M GLA D+S++ALFMQ G VK ++ L S+ +W+++I K V+F RRQF +
Sbjct: 1 MEQVGLAAASHDVSLWALFMQAGWVVKIVMIGLLGASVWTWAIVIDKYVSFAKARRQFDQ 60
Query: 59 FEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMD 118
FEQ+FWSGQSLE + ++L +N GLAAIF+SAM EWKKS ++GARSPIG+Q RIDR MD
Sbjct: 61 FEQVFWSGQSLEELYRTLAERNNTGLAAIFVSAMREWKKSFERGARSPIGLQMRIDRSMD 120
Query: 119 VAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIE 177
V +ARE E +L L ++ SAG +G+ G V+G+M FQ+IAG S N+ V PGI E
Sbjct: 121 VTMAREAEHFEARLGSLATIGSAGPFIGLFGTVIGIMTSFQAIAGSKSTNLAVVAPGIAE 180
Query: 178 SLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+L++ +GL +IP+ IAYNKF ++ K + +MEGFA+EFSAILSRQ +
Sbjct: 181 ALLATAIGLVAAIPAVIAYNKFSGEAGKLSSRMEGFADEFSAILSRQID 229
>gi|222086977|ref|YP_002545511.1| protein TolQ [Agrobacterium radiobacter K84]
gi|221724425|gb|ACM27581.1| protein TolQ [Agrobacterium radiobacter K84]
Length = 240
Score = 237 bits (605), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 113/218 (51%), Positives = 158/218 (72%), Gaps = 1/218 (0%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
DI++++LFMQ GL VK ++ L S+ +W+++I K ++F RRQF FEQ+FWSGQSL
Sbjct: 13 DITLWSLFMQAGLVVKLVMLGLLAASVWTWAIVIDKYLSFARARRQFDHFEQVFWSGQSL 72
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
E + ++L N GL+AIF++AM EWKKS ++GARSPIG+Q RIDR MDV +ARE E +
Sbjct: 73 EELYRTLSERTNTGLSAIFVAAMREWKKSFERGARSPIGLQMRIDRAMDVTLARESEHLG 132
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCV 188
+L L ++ SAG +G+ G V+G+M FQ+IAG S N+ V PGI E+L++ +GL
Sbjct: 133 ARLGSLATIGSAGPFIGLFGTVVGIMTSFQAIAGSKSTNLAVVAPGIAEALLATAIGLVA 192
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ IAYNKF D+ K + +MEGFA+EFSAILSRQ +
Sbjct: 193 AIPAVIAYNKFSADAGKLSARMEGFADEFSAILSRQID 230
>gi|86359057|ref|YP_470949.1| protein transporter protein [Rhizobium etli CFN 42]
gi|218672504|ref|ZP_03522173.1| protein transporter protein [Rhizobium etli GR56]
gi|86283159|gb|ABC92222.1| protein transporter protein [Rhizobium etli CFN 42]
gi|327193470|gb|EGE60366.1| protein transporter protein [Rhizobium etli CNPAF512]
Length = 239
Score = 237 bits (604), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 116/229 (50%), Positives = 163/229 (71%), Gaps = 3/229 (1%)
Query: 1 MNNYGLA--IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFRE 58
M GLA D+S+++LFMQ G+ VK ++ L S+ +W+++I K + + RRQF +
Sbjct: 1 MEQVGLAAATTDVSLWSLFMQAGIVVKLVMLGLIAASVWTWAIVIDKYLAYGRARRQFDK 60
Query: 59 FEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMD 118
FEQ+FWSGQSLE + +SL +N GLA+IF++AM EWKKS ++GARSPIG+Q RIDR MD
Sbjct: 61 FEQVFWSGQSLEELYRSLSERNNTGLASIFVAAMREWKKSFERGARSPIGLQMRIDRAMD 120
Query: 119 VAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIE 177
V +ARE E + +L L ++ SAG +G+ G V+G+M FQ+IAG S N+ V PGI E
Sbjct: 121 VTLARETEYLGARLGSLATIGSAGPFIGLFGTVVGIMTSFQAIAGSKSTNLAVVAPGIAE 180
Query: 178 SLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+L++ +GL +IP+ IAYNKF D+ K + +MEGFA+EFSAILSRQ +
Sbjct: 181 ALLATAIGLVAAIPAVIAYNKFSADAGKLSARMEGFADEFSAILSRQID 229
>gi|116253712|ref|YP_769550.1| TolQ protein uptake system component [Rhizobium leguminosarum bv.
viciae 3841]
gi|115258360|emb|CAK09463.1| putative TolQ protein uptake system component [Rhizobium
leguminosarum bv. viciae 3841]
Length = 239
Score = 236 bits (603), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 117/229 (51%), Positives = 163/229 (71%), Gaps = 3/229 (1%)
Query: 1 MNNYGLA--IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFRE 58
M GLA D+S+++LFMQ G+ VK ++ L S+ +W+++I K + + RRQF +
Sbjct: 1 MEQVGLAAATTDVSLWSLFMQAGIVVKLVMLGLIAASVWTWAIVIDKYLAYGRARRQFDK 60
Query: 59 FEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMD 118
FEQ+FWSGQSLE + +SL +N GLAAIF++AM EWKKS ++GARSPIG+Q RIDR MD
Sbjct: 61 FEQVFWSGQSLEELYRSLSERNNTGLAAIFVAAMREWKKSFERGARSPIGLQMRIDRAMD 120
Query: 119 VAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIE 177
V +ARE E + +L L ++ SAG +G+ G V+G+M FQ+IAG S N+ V PGI E
Sbjct: 121 VTLARETEFLGARLGSLATIGSAGPFIGLFGTVVGIMTSFQAIAGSKSTNLAVVAPGIAE 180
Query: 178 SLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+L++ +GL +IP+ IAYNKF D+ K + +MEGFA+EFSAILSRQ +
Sbjct: 181 ALLATAIGLVAAIPAVIAYNKFSADAGKLSGRMEGFADEFSAILSRQID 229
>gi|241206188|ref|YP_002977284.1| protein TolQ [Rhizobium leguminosarum bv. trifolii WSM1325]
gi|240860078|gb|ACS57745.1| protein TolQ [Rhizobium leguminosarum bv. trifolii WSM1325]
Length = 239
Score = 236 bits (602), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 117/229 (51%), Positives = 162/229 (70%), Gaps = 3/229 (1%)
Query: 1 MNNYGLA--IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFRE 58
M GLA D+S+++LFMQ G+ VK ++ L S+ +W+++I K + + RRQF +
Sbjct: 1 MEQVGLAAATTDVSLWSLFMQAGIVVKLVMLGLIAASVWTWAIVIDKYLAYGRARRQFDK 60
Query: 59 FEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMD 118
FEQ+FWSGQSLE + +SL N GLAAIF++AM EWKKS ++GARSPIG+Q RIDR MD
Sbjct: 61 FEQVFWSGQSLEELYRSLSERSNTGLAAIFVAAMREWKKSFERGARSPIGLQMRIDRAMD 120
Query: 119 VAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIE 177
V +ARE E + +L L ++ SAG +G+ G V+G+M FQ+IAG S N+ V PGI E
Sbjct: 121 VTLARETEFLGARLGSLATIGSAGPFIGLFGTVVGIMTSFQAIAGSKSTNLAVVAPGIAE 180
Query: 178 SLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+L++ +GL +IP+ IAYNKF D+ K + +MEGFA+EFSAILSRQ +
Sbjct: 181 ALLATAIGLVAAIPAVIAYNKFSADAGKLSGRMEGFADEFSAILSRQID 229
>gi|190893279|ref|YP_001979821.1| biopolymer transporter protein [Rhizobium etli CIAT 652]
gi|209550780|ref|YP_002282697.1| protein TolQ [Rhizobium leguminosarum bv. trifolii WSM2304]
gi|190698558|gb|ACE92643.1| biopolymer transporter protein [Rhizobium etli CIAT 652]
gi|209536536|gb|ACI56471.1| protein TolQ [Rhizobium leguminosarum bv. trifolii WSM2304]
Length = 239
Score = 234 bits (597), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 116/229 (50%), Positives = 163/229 (71%), Gaps = 3/229 (1%)
Query: 1 MNNYGLA--IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFRE 58
M GLA D+S+++LFMQ G+ VK ++ L S+ +W+++I K + + RRQF +
Sbjct: 1 MEQVGLAAATTDVSLWSLFMQAGIVVKLVMLGLIAASVWTWAIVIDKYLAYGRARRQFDK 60
Query: 59 FEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMD 118
FEQ+FWSGQSLE + +SL +N GLAAIF++AM EWKKS ++GARSPIG+Q RIDR MD
Sbjct: 61 FEQVFWSGQSLEELYRSLSERNNTGLAAIFVAAMREWKKSFERGARSPIGLQMRIDRAMD 120
Query: 119 VAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIE 177
V ++RE E + +L L ++ SAG +G+ G V+G+M FQ+IAG S N+ V PGI E
Sbjct: 121 VTLSRESEFLGARLGSLATIGSAGPFIGLFGTVVGIMTSFQAIAGSKSTNLAVVAPGIAE 180
Query: 178 SLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+L++ +GL +IP+ IAYNKF D+ K + +MEGFA+EFSAILSRQ +
Sbjct: 181 ALLATAIGLVAAIPAVIAYNKFSADAGKLSGRMEGFADEFSAILSRQID 229
>gi|227823311|ref|YP_002827283.1| putative TolQ protein uptake system component [Sinorhizobium fredii
NGR234]
gi|227342312|gb|ACP26530.1| putative TolQ protein uptake system component [Sinorhizobium fredii
NGR234]
Length = 239
Score = 233 bits (593), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 111/228 (48%), Positives = 160/228 (70%), Gaps = 2/228 (0%)
Query: 1 MNNYGLAIM-DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREF 59
M GLA D+++++LFMQ GL VK ++ L S+ +W++++ KS+N+ +RRQ F
Sbjct: 1 MEQVGLAATSDVTLWSLFMQAGLVVKLVMLGLIAASVWTWAIVVDKSLNYGRVRRQLDNF 60
Query: 60 EQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDV 119
EQ+FWSGQSLE + ++L + G+ AIF+SAM EWKKS ++GARSPIG+Q RIDR MDV
Sbjct: 61 EQVFWSGQSLEELYRTLSDRQTTGMGAIFVSAMREWKKSFERGARSPIGLQMRIDRAMDV 120
Query: 120 AIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIES 178
+ARE E + +L L ++ S+ +G+ G V+G+M FQ+IAG S N+ V PGI E+
Sbjct: 121 TLARESESLEARLGSLATIGSSAPFIGLFGTVVGIMTSFQAIAGSKSTNLAVVAPGIAEA 180
Query: 179 LISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
L++ +GL +IP+ IAYNKF D+ K + +ME FA+EFSAILSRQ +
Sbjct: 181 LLATAIGLLAAIPAVIAYNKFTADAGKLSARMEAFADEFSAILSRQID 228
>gi|150397828|ref|YP_001328295.1| Tol-Pal system TolQ [Sinorhizobium medicae WSM419]
gi|150029343|gb|ABR61460.1| Tol-Pal system TolQ [Sinorhizobium medicae WSM419]
Length = 239
Score = 232 bits (592), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 111/228 (48%), Positives = 160/228 (70%), Gaps = 2/228 (0%)
Query: 1 MNNYGLAIM-DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREF 59
M GLA D+++++LFMQ GL VK ++ L S+ +W++++ KS+N+ +RRQ F
Sbjct: 1 MEQVGLAATSDVTLWSLFMQAGLVVKLVMLGLIAASVWTWAIVVDKSLNYGRVRRQLDSF 60
Query: 60 EQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDV 119
EQ+FWSGQSLE + ++L + G+ AIF+SAM EWKKS ++GAR+PIG+Q RIDR MDV
Sbjct: 61 EQVFWSGQSLEELYRTLSDRQTSGMGAIFVSAMREWKKSFERGARAPIGLQMRIDRAMDV 120
Query: 120 AIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIES 178
+ARE E + +L L ++ SA +G+ G V+G+M FQ+IAG S N+ V PGI E+
Sbjct: 121 TLARESEALEARLGSLATIGSAAPFIGLFGTVVGIMTSFQAIAGSKSTNLAVVAPGIAEA 180
Query: 179 LISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
L++ +GL +IP+ IAYNKF D+ K + +ME FA+EFSAILSRQ +
Sbjct: 181 LLATAIGLLAAIPAVIAYNKFTADAGKLSARMEAFADEFSAILSRQID 228
>gi|15966495|ref|NP_386848.1| putative transport transmembrane protein [Sinorhizobium meliloti
1021]
gi|307300468|ref|ZP_07580248.1| protein TolQ [Sinorhizobium meliloti BL225C]
gi|307318333|ref|ZP_07597768.1| protein TolQ [Sinorhizobium meliloti AK83]
gi|15075766|emb|CAC47321.1| Putative transport transmembrane protein [Sinorhizobium meliloti
1021]
gi|306896015|gb|EFN26766.1| protein TolQ [Sinorhizobium meliloti AK83]
gi|306904634|gb|EFN35218.1| protein TolQ [Sinorhizobium meliloti BL225C]
Length = 239
Score = 232 bits (591), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 111/228 (48%), Positives = 159/228 (69%), Gaps = 2/228 (0%)
Query: 1 MNNYGLAIM-DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREF 59
M GLA D+++++LFMQ GL VK ++ L S+ +W++++ KS+N+ +RRQ F
Sbjct: 1 MEQVGLAATSDVTLWSLFMQAGLVVKLVMLGLIAASVWTWAIVVDKSLNYGRVRRQLDNF 60
Query: 60 EQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDV 119
EQ+FWSGQSLE + ++L + G+ AIF+SAM EWKKS ++GAR+PIG+Q RIDR MDV
Sbjct: 61 EQVFWSGQSLEELYRTLSDRQTSGMGAIFVSAMREWKKSFERGARAPIGLQMRIDRAMDV 120
Query: 120 AIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIES 178
+ARE E + +L L ++ SA +G+ G V+G+M FQ+IAG S N+ V PGI E+
Sbjct: 121 TLARESEALEARLGSLATIGSAAPFIGLFGTVVGIMTSFQAIAGSKSTNLAVVAPGIAEA 180
Query: 179 LISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
L++ +GL +IP+ IAYNKF D+ K +ME FA+EFSAILSRQ +
Sbjct: 181 LLATAIGLLAAIPAVIAYNKFTADAGKLTARMEAFADEFSAILSRQID 228
>gi|110635503|ref|YP_675711.1| MotA/TolQ/ExbB proton channel [Mesorhizobium sp. BNC1]
gi|110286487|gb|ABG64546.1| Cell division and transport-associated protein TolQ [Chelativorans
sp. BNC1]
Length = 243
Score = 223 bits (567), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 108/222 (48%), Positives = 154/222 (69%), Gaps = 1/222 (0%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+SI+ALF Q G VK ++ L SI SW++II K ++F +R FEQ+FWSGQSL
Sbjct: 12 DLSIWALFWQAGWVVKLVMIGLLGASIWSWAIIIDKWLSFARMRVALNRFEQVFWSGQSL 71
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
E + +SL + G+ +IF++AM EWKKS +KGARSP+G+Q RID+ MD+A+ RE+E +
Sbjct: 72 EELYRSLSDRKTSGMGSIFVAAMREWKKSFEKGARSPLGLQTRIDKAMDLALTREMERLE 131
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCV 188
KL FL S+ ++ +G+ G V+G+M FQ+IAG S N+ V PGI E+L++ +GL
Sbjct: 132 SKLGFLASVGASAPFIGLFGTVVGIMTSFQAIAGSKSTNLAVVAPGIAEALLATAIGLLA 191
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
+IP+ IAYNK D+ A +MEGFA+EFSAILSRQ + ++
Sbjct: 192 AIPAVIAYNKLTADAGNIASRMEGFADEFSAILSRQIDEKVA 233
>gi|163758793|ref|ZP_02165880.1| putative transport transmembrane protein [Hoeflea phototrophica
DFL-43]
gi|162284083|gb|EDQ34367.1| putative transport transmembrane protein [Hoeflea phototrophica
DFL-43]
Length = 238
Score = 219 bits (559), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 109/232 (46%), Positives = 159/232 (68%), Gaps = 2/232 (0%)
Query: 1 MNNYGLAIM-DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREF 59
M GLA ++++++LFMQ G VK ++ L SI +W+++ K V++ R Q +F
Sbjct: 1 MEQVGLAATSEVTLWSLFMQAGFVVKLVMLGLVGASIWTWAIVADKWVSYRKFRGQLDQF 60
Query: 60 EQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDV 119
EQ+FWSGQSLE + ++L + G++AIF++AM EWKKS ++GA+SPIG+Q RID+ MDV
Sbjct: 61 EQIFWSGQSLEELYRTLSDRKTSGMSAIFVAAMREWKKSFERGAKSPIGLQMRIDKAMDV 120
Query: 120 AIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIES 178
+ARE E + KL L S+ SA +G+ G V+G+M FQ+IAG S N+ V PGI E+
Sbjct: 121 TLAREAEHLESKLGSLASIGSAAPFIGLFGTVVGIMTSFQAIAGSKSTNLAVVAPGIAEA 180
Query: 179 LISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
L++ +GL +IP+ IAYNKF D+ K + +MEGFA+EFS ILSRQ + +S
Sbjct: 181 LLATAIGLLAAIPAVIAYNKFSSDAGKLSGRMEGFADEFSGILSRQIDERMS 232
>gi|153008546|ref|YP_001369761.1| Tol-Pal system TolQ [Ochrobactrum anthropi ATCC 49188]
gi|151560434|gb|ABS13932.1| Tol-Pal system TolQ [Ochrobactrum anthropi ATCC 49188]
Length = 236
Score = 217 bits (553), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 107/233 (45%), Positives = 156/233 (66%), Gaps = 3/233 (1%)
Query: 1 MNNYGLAI--MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFRE 58
M N LA D++++ LFMQ VK ++ L SI +W++I+ K++ + RR
Sbjct: 1 MENVALAAPAADVTLWGLFMQANWVVKLVMLGLLFASIWTWAIIVDKTIAYGRARRAIDR 60
Query: 59 FEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMD 118
FEQ FWSGQSLE + ++L G+A+IFM+AM EWKKS +KGARSPIG+Q RID+ MD
Sbjct: 61 FEQTFWSGQSLEELYRNLGERRTTGMASIFMAAMREWKKSFEKGARSPIGLQMRIDKAMD 120
Query: 119 VAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIE 177
VA+ARE E++ +L FL ++ SA +G+ G V+G+M FQ+IA + ++ V PGI E
Sbjct: 121 VALARESEKLDSRLGFLATIGSAAPFIGLFGTVVGIMTSFQAIAASKNTSLAVVAPGIAE 180
Query: 178 SLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
+L++ +GL +IP+ IAYNK D+ K ++EGFA+EFSAILSRQ + ++
Sbjct: 181 ALLATAIGLLAAIPAVIAYNKLSADAGKIGGRLEGFADEFSAILSRQIDEKLT 233
>gi|239832786|ref|ZP_04681115.1| protein TolQ [Ochrobactrum intermedium LMG 3301]
gi|239825053|gb|EEQ96621.1| protein TolQ [Ochrobactrum intermedium LMG 3301]
Length = 236
Score = 217 bits (552), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 107/233 (45%), Positives = 156/233 (66%), Gaps = 3/233 (1%)
Query: 1 MNNYGLAI--MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFRE 58
M N LA D++++ LFMQ VK ++ L SI +W++I+ K++ + RR
Sbjct: 1 MENVALAAPAADVTLWGLFMQANWVVKLVMLGLLFASIWTWAIIVDKTIAYGRARRAIDR 60
Query: 59 FEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMD 118
FEQ FWSGQSLE + ++L G+A+IFM+AM EWKKS +KGARSPIG+Q RID+ MD
Sbjct: 61 FEQTFWSGQSLEELYRNLGERRTTGMASIFMAAMREWKKSFEKGARSPIGLQMRIDKAMD 120
Query: 119 VAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIE 177
VA+ARE E++ +L FL ++ SA +G+ G V+G+M FQ+IA + ++ V PGI E
Sbjct: 121 VALAREGEKLESRLGFLATIGSAAPFIGLFGTVVGIMTSFQAIAASKNTSLAVVAPGIAE 180
Query: 178 SLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
+L++ +GL +IP+ IAYNK D+ K ++EGFA+EFSAILSRQ + ++
Sbjct: 181 ALLATAIGLLAAIPAVIAYNKLSADAGKIGGRLEGFADEFSAILSRQIDEKLT 233
>gi|13473333|ref|NP_104900.1| TolQ protein, inner membrane protein, tolerance to group A colicins
[Mesorhizobium loti MAFF303099]
gi|14024082|dbj|BAB50686.1| inner membrane protein; TolQ [Mesorhizobium loti MAFF303099]
Length = 236
Score = 214 bits (545), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 105/233 (45%), Positives = 158/233 (67%), Gaps = 3/233 (1%)
Query: 1 MNNYGLAI--MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFRE 58
M N LA +SI+ALFMQ VK ++ L S+ +W++II K V + +R
Sbjct: 1 MENIALADPGAQLSIWALFMQASWVVKLVMIGLLCASVWTWAIIIDKLVAYGRMRLALNR 60
Query: 59 FEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMD 118
FEQ+FWSGQSLE + ++L + G+ AIF++AM EWKKS +KGA++P+G+Q RID+ MD
Sbjct: 61 FEQVFWSGQSLEELYRTLADRKTSGMGAIFVAAMREWKKSFEKGAKTPLGLQTRIDKAMD 120
Query: 119 VAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIE 177
+A+ RE+E++ +L FL + SA +G+ G V+G+M FQ+IAG + ++ V PGI E
Sbjct: 121 LALTREMEKLEGRLGFLATTGSAAPFIGLFGTVIGIMTSFQAIAGSKNTSLAVVAPGIAE 180
Query: 178 SLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
+L++ +GL +IP+ IAYNK D+ K A++MEGF++EFSAILSRQ + ++
Sbjct: 181 ALLATAIGLLAAIPAVIAYNKLSSDASKLAVRMEGFSDEFSAILSRQIDEKVA 233
>gi|90418973|ref|ZP_01226884.1| TolQ biopolymer transport protein, tolerance to group A tolicins
[Aurantimonas manganoxydans SI85-9A1]
gi|90337053|gb|EAS50758.1| TolQ biopolymer transport protein, tolerance to group A tolicins
[Aurantimonas manganoxydans SI85-9A1]
Length = 238
Score = 214 bits (545), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 103/221 (46%), Positives = 150/221 (67%), Gaps = 1/221 (0%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+S++ LF Q G VK ++ L S+ +W++II KS+ + RRQ +FE FWSGQSLE
Sbjct: 16 VSLWDLFWQAGFIVKLVMIGLMAASVWTWAIIIDKSMRYGRFRRQLNKFESNFWSGQSLE 75
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
+ +L G+ A+F++AM EWKKS +KGARSP+G+Q RID+ MDV +ARE++E+
Sbjct: 76 DLYHNLSERKTSGMGALFVAAMREWKKSFEKGARSPLGLQTRIDKAMDVTLAREMDELES 135
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVS 189
+L FL ++ SA VG+ G V+G+M FQ+IAG ++ V PGI E+L++ +GL +
Sbjct: 136 RLGFLATIGSAAPFVGLFGTVIGIMTSFQAIAGSQQTSLAVVAPGIAEALLATAIGLVAA 195
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
IP+ IAYNK D+ K M++E FA+EFSAILSRQ + +S
Sbjct: 196 IPAVIAYNKLSADAGKLGMRLESFADEFSAILSRQIDEKLS 236
>gi|254719703|ref|ZP_05181514.1| protein TolQ [Brucella sp. 83/13]
gi|265984717|ref|ZP_06097452.1| TolQ protein [Brucella sp. 83/13]
gi|306837838|ref|ZP_07470700.1| protein TolQ [Brucella sp. NF 2653]
gi|306841419|ref|ZP_07474121.1| protein TolQ [Brucella sp. BO2]
gi|306844692|ref|ZP_07477277.1| protein TolQ [Brucella sp. BO1]
gi|264663309|gb|EEZ33570.1| TolQ protein [Brucella sp. 83/13]
gi|306274864|gb|EFM56634.1| protein TolQ [Brucella sp. BO1]
gi|306288525|gb|EFM59877.1| protein TolQ [Brucella sp. BO2]
gi|306407077|gb|EFM63294.1| protein TolQ [Brucella sp. NF 2653]
Length = 236
Score = 213 bits (543), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 106/233 (45%), Positives = 155/233 (66%), Gaps = 3/233 (1%)
Query: 1 MNNYGLAI--MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFRE 58
M N LA D++++ LFMQ VK ++ L SI +W++I+ K++ + RR
Sbjct: 1 MENVALAAPAADVTLWGLFMQANWVVKLVMLGLLFASIWTWAIIVDKTIAYGRARRAIDR 60
Query: 59 FEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMD 118
FEQ FWSGQSLE + ++L G+A+IFM+AM EWKKS +KGARSPIG+Q RID+ MD
Sbjct: 61 FEQTFWSGQSLEELYRNLSERRTSGMASIFMAAMREWKKSFEKGARSPIGLQMRIDKAMD 120
Query: 119 VAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIE 177
VA+ARE ++ +L FL ++ SA +G+ G V+G+M FQ+IA + ++ V PGI E
Sbjct: 121 VALARESGKLESRLGFLATIGSAAPFIGLFGTVVGIMTSFQAIAASKNTSLAVVAPGIAE 180
Query: 178 SLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
+L++ +GL +IP+ IAYNK D+ K ++EGFA+EFSAILSRQ + ++
Sbjct: 181 ALLATAIGLLAAIPAVIAYNKLSADAGKIGGRLEGFADEFSAILSRQIDEKLT 233
>gi|114706801|ref|ZP_01439701.1| putative transport transmembrane protein [Fulvimarina pelagi
HTCC2506]
gi|114537749|gb|EAU40873.1| putative transport transmembrane protein [Fulvimarina pelagi
HTCC2506]
Length = 241
Score = 213 bits (543), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 100/217 (46%), Positives = 150/217 (69%), Gaps = 1/217 (0%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+S++ LF Q GL VK ++ L + S+ +W++II K + + +RRQ FE FWSG+SLE
Sbjct: 16 VSMWDLFWQAGLIVKLVMIGLVVASVWTWAIIIDKVMRYAAMRRQLNNFENQFWSGRSLE 75
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
+ ++L + G+ A+F++AM EWKKS +KGARSPIG+Q RI++ MDV +ARE++ +
Sbjct: 76 ELYQTLVDRKPTGMGAVFVAAMREWKKSFEKGARSPIGLQQRIEKAMDVTLAREMDHLES 135
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVS 189
+L FL ++ SA VG+ G V+G+M FQ+IAG ++ V PGI E+L++ +GL +
Sbjct: 136 RLGFLATIGSAAPFVGLFGTVIGIMTSFQAIAGSQQTSLAVVAPGIAEALLATAIGLVAA 195
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
IP+ IAYNK D+ K M+ME FA+EFS+ILSRQ +
Sbjct: 196 IPAVIAYNKLTADAGKIGMRMESFADEFSSILSRQID 232
>gi|17986619|ref|NP_539253.1| TOLQ protein [Brucella melitensis bv. 1 str. 16M]
gi|23502558|ref|NP_698685.1| tolQ protein [Brucella suis 1330]
gi|62290572|ref|YP_222365.1| TolQ protein [Brucella abortus bv. 1 str. 9-941]
gi|82700488|ref|YP_415062.1| MotA/TolQ/ExbB proton channel [Brucella melitensis biovar Abortus
2308]
gi|161619629|ref|YP_001593516.1| protein TolQ [Brucella canis ATCC 23365]
gi|163845279|ref|YP_001622934.1| protein TolQ [Brucella suis ATCC 23445]
gi|189024790|ref|YP_001935558.1| MotA/TolQ/ExbB proton channel [Brucella abortus S19]
gi|225628268|ref|ZP_03786302.1| protein TolQ [Brucella ceti str. Cudo]
gi|225853155|ref|YP_002733388.1| protein TolQ [Brucella melitensis ATCC 23457]
gi|237816077|ref|ZP_04595073.1| protein TolQ [Brucella abortus str. 2308 A]
gi|254689868|ref|ZP_05153122.1| protein TolQ [Brucella abortus bv. 6 str. 870]
gi|254694361|ref|ZP_05156189.1| protein TolQ [Brucella abortus bv. 3 str. Tulya]
gi|254698019|ref|ZP_05159847.1| protein TolQ [Brucella abortus bv. 2 str. 86/8/59]
gi|254700361|ref|ZP_05162189.1| protein TolQ [Brucella suis bv. 5 str. 513]
gi|254703478|ref|ZP_05165306.1| protein TolQ [Brucella suis bv. 3 str. 686]
gi|254708432|ref|ZP_05170260.1| protein TolQ [Brucella pinnipedialis M163/99/10]
gi|254708714|ref|ZP_05170525.1| protein TolQ [Brucella pinnipedialis B2/94]
gi|254714561|ref|ZP_05176372.1| protein TolQ [Brucella ceti M644/93/1]
gi|254717458|ref|ZP_05179269.1| protein TolQ [Brucella ceti M13/05/1]
gi|254730903|ref|ZP_05189481.1| protein TolQ [Brucella abortus bv. 4 str. 292]
gi|256030240|ref|ZP_05443854.1| protein TolQ [Brucella pinnipedialis M292/94/1]
gi|256045310|ref|ZP_05448204.1| protein TolQ [Brucella melitensis bv. 1 str. Rev.1]
gi|256061737|ref|ZP_05451874.1| protein TolQ [Brucella neotomae 5K33]
gi|256114268|ref|ZP_05455013.1| protein TolQ [Brucella melitensis bv. 3 str. Ether]
gi|256160415|ref|ZP_05458104.1| protein TolQ [Brucella ceti M490/95/1]
gi|256255621|ref|ZP_05461157.1| protein TolQ [Brucella ceti B1/94]
gi|256258122|ref|ZP_05463658.1| protein TolQ [Brucella abortus bv. 9 str. C68]
gi|256263353|ref|ZP_05465885.1| TolQ protein [Brucella melitensis bv. 2 str. 63/9]
gi|256370109|ref|YP_003107620.1| biopolymer transport protein TolQ [Brucella microti CCM 4915]
gi|260167915|ref|ZP_05754726.1| biopolymer transport protein TolQ [Brucella sp. F5/99]
gi|260565799|ref|ZP_05836282.1| TolQ protein [Brucella melitensis bv. 1 str. 16M]
gi|260568785|ref|ZP_05839253.1| TolQ protein [Brucella suis bv. 4 str. 40]
gi|260755399|ref|ZP_05867747.1| TolQ protein [Brucella abortus bv. 6 str. 870]
gi|260758621|ref|ZP_05870969.1| TolQ protein [Brucella abortus bv. 4 str. 292]
gi|260762453|ref|ZP_05874790.1| TolQ protein [Brucella abortus bv. 2 str. 86/8/59]
gi|260884415|ref|ZP_05896029.1| TolQ protein [Brucella abortus bv. 9 str. C68]
gi|261214670|ref|ZP_05928951.1| TolQ protein [Brucella abortus bv. 3 str. Tulya]
gi|261219289|ref|ZP_05933570.1| TolQ protein [Brucella ceti M13/05/1]
gi|261222824|ref|ZP_05937105.1| TolQ protein [Brucella ceti B1/94]
gi|261315932|ref|ZP_05955129.1| biopolymer transporter TolQ [Brucella pinnipedialis M163/99/10]
gi|261316205|ref|ZP_05955402.1| TolQ protein [Brucella pinnipedialis B2/94]
gi|261322350|ref|ZP_05961547.1| TolQ protein [Brucella ceti M644/93/1]
gi|261325741|ref|ZP_05964938.1| TolQ protein [Brucella neotomae 5K33]
gi|261750855|ref|ZP_05994564.1| TolQ protein [Brucella suis bv. 5 str. 513]
gi|261754108|ref|ZP_05997817.1| TolQ protein [Brucella suis bv. 3 str. 686]
gi|261757353|ref|ZP_06001062.1| TolQ protein [Brucella sp. F5/99]
gi|265987268|ref|ZP_06099825.1| TolQ protein [Brucella pinnipedialis M292/94/1]
gi|265991735|ref|ZP_06104292.1| TolQ protein [Brucella melitensis bv. 1 str. Rev.1]
gi|265995572|ref|ZP_06108129.1| TolQ protein [Brucella melitensis bv. 3 str. Ether]
gi|265998783|ref|ZP_06111340.1| TolQ protein [Brucella ceti M490/95/1]
gi|294850951|ref|ZP_06791627.1| TolQ [Brucella sp. NVSL 07-0026]
gi|297248971|ref|ZP_06932679.1| TolQ protein [Brucella abortus bv. 5 str. B3196]
gi|13898973|gb|AAK48915.1|AF358662_2 TolQ protein [Brucella melitensis]
gi|17982232|gb|AAL51517.1| tolq protein [Brucella melitensis bv. 1 str. 16M]
gi|23348558|gb|AAN30600.1| tolQ protein [Brucella suis 1330]
gi|62196704|gb|AAX75004.1| TolQ, tolQ protein [Brucella abortus bv. 1 str. 9-941]
gi|82616589|emb|CAJ11668.1| MotA/TolQ/ExbB proton channel [Brucella melitensis biovar Abortus
2308]
gi|161336440|gb|ABX62745.1| protein TolQ [Brucella canis ATCC 23365]
gi|163676002|gb|ABY40112.1| protein TolQ [Brucella suis ATCC 23445]
gi|189020362|gb|ACD73084.1| MotA/TolQ/ExbB proton channel [Brucella abortus S19]
gi|225616114|gb|EEH13162.1| protein TolQ [Brucella ceti str. Cudo]
gi|225641520|gb|ACO01434.1| protein TolQ [Brucella melitensis ATCC 23457]
gi|237788740|gb|EEP62952.1| protein TolQ [Brucella abortus str. 2308 A]
gi|256000272|gb|ACU48671.1| biopolymer transport protein TolQ [Brucella microti CCM 4915]
gi|260151172|gb|EEW86267.1| TolQ protein [Brucella melitensis bv. 1 str. 16M]
gi|260154169|gb|EEW89251.1| TolQ protein [Brucella suis bv. 4 str. 40]
gi|260668939|gb|EEX55879.1| TolQ protein [Brucella abortus bv. 4 str. 292]
gi|260672879|gb|EEX59700.1| TolQ protein [Brucella abortus bv. 2 str. 86/8/59]
gi|260675507|gb|EEX62328.1| TolQ protein [Brucella abortus bv. 6 str. 870]
gi|260873943|gb|EEX81012.1| TolQ protein [Brucella abortus bv. 9 str. C68]
gi|260916277|gb|EEX83138.1| TolQ protein [Brucella abortus bv. 3 str. Tulya]
gi|260921408|gb|EEX88061.1| TolQ protein [Brucella ceti B1/94]
gi|260924378|gb|EEX90946.1| TolQ protein [Brucella ceti M13/05/1]
gi|261295040|gb|EEX98536.1| TolQ protein [Brucella ceti M644/93/1]
gi|261295428|gb|EEX98924.1| TolQ protein [Brucella pinnipedialis B2/94]
gi|261301721|gb|EEY05218.1| TolQ protein [Brucella neotomae 5K33]
gi|261304958|gb|EEY08455.1| biopolymer transporter TolQ [Brucella pinnipedialis M163/99/10]
gi|261737337|gb|EEY25333.1| TolQ protein [Brucella sp. F5/99]
gi|261740608|gb|EEY28534.1| TolQ protein [Brucella suis bv. 5 str. 513]
gi|261743861|gb|EEY31787.1| TolQ protein [Brucella suis bv. 3 str. 686]
gi|262553472|gb|EEZ09241.1| TolQ protein [Brucella ceti M490/95/1]
gi|262766856|gb|EEZ12474.1| TolQ protein [Brucella melitensis bv. 3 str. Ether]
gi|263002691|gb|EEZ15094.1| TolQ protein [Brucella melitensis bv. 1 str. Rev.1]
gi|263093352|gb|EEZ17421.1| TolQ protein [Brucella melitensis bv. 2 str. 63/9]
gi|264659465|gb|EEZ29726.1| TolQ protein [Brucella pinnipedialis M292/94/1]
gi|294821594|gb|EFG38590.1| TolQ [Brucella sp. NVSL 07-0026]
gi|297174104|gb|EFH33461.1| TolQ protein [Brucella abortus bv. 5 str. B3196]
gi|326409713|gb|ADZ66778.1| MotA/TolQ/ExbB proton channel [Brucella melitensis M28]
gi|326539420|gb|ADZ87635.1| protein TolQ [Brucella melitensis M5-90]
Length = 236
Score = 213 bits (542), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 106/233 (45%), Positives = 155/233 (66%), Gaps = 3/233 (1%)
Query: 1 MNNYGLAI--MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFRE 58
M N LA D++++ LFMQ VK ++ L SI +W++I+ K++ + RR
Sbjct: 1 MENVALAAPAADVTLWGLFMQANWVVKLVMLGLLFASIWTWAIIVDKTIAYGRARRAIDR 60
Query: 59 FEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMD 118
FEQ FWSGQSLE + ++L G+A+IFM+AM EWKKS +KGARSPIG+Q RID+ MD
Sbjct: 61 FEQSFWSGQSLEELYRNLSERRTSGMASIFMAAMREWKKSFEKGARSPIGLQMRIDKAMD 120
Query: 119 VAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIE 177
VA+ARE ++ +L FL ++ SA +G+ G V+G+M FQ+IA + ++ V PGI E
Sbjct: 121 VALARESGKLESRLGFLATIGSAAPFIGLFGTVVGIMTSFQAIAASKNTSLAVVAPGIAE 180
Query: 178 SLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
+L++ +GL +IP+ IAYNK D+ K ++EGFA+EFSAILSRQ + ++
Sbjct: 181 ALLATAIGLLAAIPAVIAYNKLSADAGKIGGRLEGFADEFSAILSRQIDEKLT 233
>gi|260547184|ref|ZP_05822922.1| TolQ protein [Brucella abortus NCTC 8038]
gi|260095549|gb|EEW79427.1| TolQ protein [Brucella abortus NCTC 8038]
Length = 228
Score = 212 bits (540), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 106/227 (46%), Positives = 152/227 (66%), Gaps = 3/227 (1%)
Query: 1 MNNYGLAI--MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFRE 58
M N LA D++++ LFMQ VK ++ L SI +W++I+ K++ + RR
Sbjct: 1 MENVALAAPAADVTLWGLFMQANWVVKLVMLGLLFASIWTWAIIVDKTIAYGRARRAIDR 60
Query: 59 FEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMD 118
FEQ FWSGQSLE + ++L G+A+IFM+AM EWKKS +KGARSPIG+Q RID+ MD
Sbjct: 61 FEQSFWSGQSLEELYRNLSERRTSGMASIFMAAMREWKKSFEKGARSPIGLQMRIDKAMD 120
Query: 119 VAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIE 177
VA+ARE ++ +L FL ++ SA +G+ G V+G+M FQ+IA + ++ V PGI E
Sbjct: 121 VALARESGKLESRLGFLATIGSAAPFIGLFGTVVGIMTSFQAIAASKNTSLAVVAPGIAE 180
Query: 178 SLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+L++ +GL +IP+ IAYNK D+ K ++EGFA+EFSAILSRQ
Sbjct: 181 ALLATAIGLLAAIPAVIAYNKLSADAGKIGGRLEGFADEFSAILSRQ 227
>gi|148560345|ref|YP_001259552.1| protein TolQ [Brucella ovis ATCC 25840]
gi|148371602|gb|ABQ61581.1| protein TolQ [Brucella ovis ATCC 25840]
Length = 236
Score = 211 bits (537), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 105/233 (45%), Positives = 154/233 (66%), Gaps = 3/233 (1%)
Query: 1 MNNYGLAI--MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFRE 58
M N LA D++++ LFMQ VK ++ L SI +W++I+ K++ + RR
Sbjct: 1 MENVALAAPAADVTLWGLFMQANWVVKLVMLGLLFASIWTWAIIVDKTIAYGRARRAIDR 60
Query: 59 FEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMD 118
FEQ FWSGQSLE + ++L G+A+IFM+AM EWKKS +KGARSPIG+Q RID+ MD
Sbjct: 61 FEQSFWSGQSLEELYRNLSERRTSGMASIFMAAMREWKKSFEKGARSPIGLQMRIDKAMD 120
Query: 119 VAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIE 177
VA+ARE ++ +L FL ++ SA +G+ G V+G+M FQ+IA + ++ V PGI E
Sbjct: 121 VALARESGKLESRLGFLATIGSAAPFIGLFGTVVGIMTSFQAIAASKNTSLAVVAPGIAE 180
Query: 178 SLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
+L++ +GL +IP+ IAYNK D+ K ++EGFA+EFS ILSRQ + ++
Sbjct: 181 ALLATAIGLLAAIPAVIAYNKLSADAGKIGGRLEGFADEFSTILSRQIDEKLT 233
>gi|319781024|ref|YP_004140500.1| protein TolQ [Mesorhizobium ciceri biovar biserrulae WSM1271]
gi|317166912|gb|ADV10450.1| protein TolQ [Mesorhizobium ciceri biovar biserrulae WSM1271]
Length = 236
Score = 211 bits (537), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 101/233 (43%), Positives = 158/233 (67%), Gaps = 3/233 (1%)
Query: 1 MNNYGLAI--MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFRE 58
M N LA +S+++LF+ VK ++ L S+ +W++I+ K V++ +R
Sbjct: 1 MENIALADPGAQLSVWSLFVSASWVVKLVMIGLLCASVWTWAIIVDKLVSYARMRLALNR 60
Query: 59 FEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMD 118
FEQ+FWSGQSLE + ++L + G+ AIF++AM EWKKS +KGA+SP+G+Q RID+ MD
Sbjct: 61 FEQVFWSGQSLEELYRTLADRKTTGMGAIFVAAMREWKKSFEKGAKSPLGLQTRIDKAMD 120
Query: 119 VAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIE 177
+A+ RE+E++ +L FL + SA +G+ G V+G+M FQ+IAG + ++ V PGI E
Sbjct: 121 LALTREMEKLEGRLGFLATTGSAAPFIGLFGTVIGIMTSFQAIAGSKNTSLAVVAPGIAE 180
Query: 178 SLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
+L++ +GL +IP+ IAYNK D+ K A++MEGF++EFSAILSRQ + ++
Sbjct: 181 ALLATAIGLLAAIPAVIAYNKLSSDASKIAVRMEGFSDEFSAILSRQIDEKVA 233
>gi|260467062|ref|ZP_05813242.1| protein TolQ [Mesorhizobium opportunistum WSM2075]
gi|259029171|gb|EEW30467.1| protein TolQ [Mesorhizobium opportunistum WSM2075]
Length = 236
Score = 211 bits (536), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 104/233 (44%), Positives = 157/233 (67%), Gaps = 3/233 (1%)
Query: 1 MNNYGLAI--MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFRE 58
M N LA +SI+ALFMQ VK ++ L S+ +W++II K V + +R
Sbjct: 1 MENIALAEPGAQLSIWALFMQASWVVKLVMIGLLCASVWTWAIIIDKLVAYGRMRLALNR 60
Query: 59 FEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMD 118
FEQ+FWSGQSLE + ++L + G+ AIF++AM EWKKS +KGA++P+G+Q RID+ MD
Sbjct: 61 FEQVFWSGQSLEELYRTLADRKTSGMGAIFVAAMREWKKSFEKGAKTPLGLQTRIDKAMD 120
Query: 119 VAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIE 177
+A+ RE+E++ +L FL + SA +G+ G V+G+M FQ+IA + ++ V PGI E
Sbjct: 121 LALTREMEKLEGRLGFLATTGSAAPFIGLFGTVIGIMTSFQAIADSKNTSLAVVAPGIAE 180
Query: 178 SLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
+L++ +GL +IP+ IAYNK D+ K A++MEGF++EFSAILSRQ + ++
Sbjct: 181 ALLATAIGLLAAIPAVIAYNKLSSDASKIAVRMEGFSDEFSAILSRQIDEKVA 233
>gi|304393327|ref|ZP_07375255.1| protein TolQ [Ahrensia sp. R2A130]
gi|303294334|gb|EFL88706.1| protein TolQ [Ahrensia sp. R2A130]
Length = 265
Score = 204 bits (518), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 107/229 (46%), Positives = 159/229 (69%), Gaps = 3/229 (1%)
Query: 1 MNNYGLA--IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFRE 58
+ GLA +D S+ LF++ GL VK ++ L + SI W++I+ K + F ++RQ +
Sbjct: 32 VTREGLAAPTVDTSLIGLFLEAGLVVKIVMIGLIVASIWCWAIIVDKMLLFGRVKRQIDQ 91
Query: 59 FEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMD 118
FEQ+FWSGQSLE + ++L G+AA+F++AM EWK+S ++ ARSPIG+Q RID+ +D
Sbjct: 92 FEQVFWSGQSLEQLYQTLSMQQQTGMAALFVAAMGEWKRSFERNARSPIGLQTRIDKQLD 151
Query: 119 VAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIE 177
VA+++E+E + ++L FL ++ SA VG+ G V+G+M FQ+IAG S N+ V PGI E
Sbjct: 152 VAMSKEMETLEKRLLFLATLGSAAPFVGLFGTVVGIMTSFQAIAGSKSTNLAVVAPGIAE 211
Query: 178 SLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+L++ LGL +IP+ IAYNK D+ K +MEGFA+EFSAILSRQ +
Sbjct: 212 ALLATALGLLAAIPAVIAYNKLSADAGKIGNRMEGFADEFSAILSRQVD 260
>gi|298292997|ref|YP_003694936.1| protein TolQ [Starkeya novella DSM 506]
gi|296929508|gb|ADH90317.1| protein TolQ [Starkeya novella DSM 506]
Length = 280
Score = 201 bits (511), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 100/218 (45%), Positives = 147/218 (67%), Gaps = 1/218 (0%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S+ LF+Q L VK ++ L + SI W++II K++ F ++RQ FE FWSGQSL
Sbjct: 60 DLSLIGLFLQAHLVVKIVMLGLVLASIWVWAIIIDKTILFQRMKRQMDRFESTFWSGQSL 119
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
E + +SL + N +AAIF++AM EWK+S + GARS G+ R+D++MDV IARE+E +
Sbjct: 120 EELYRSLSSRPNHAMAAIFVAAMREWKRSYEGGARSLAGLTQRLDKVMDVTIAREVERLE 179
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCV 188
+L L ++ SAG +G+ G V G+M FQSIA + ++ V PGI E+L + +GL
Sbjct: 180 SRLLVLATVGSAGPFIGLFGTVWGIMTSFQSIAASKNTSLAVVAPGIAEALFATAIGLIA 239
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP++I YNKF+ + A ++EGFA+EFSAILSRQ +
Sbjct: 240 AIPATIFYNKFVSQVNRQAARLEGFADEFSAILSRQID 277
>gi|158422145|ref|YP_001523437.1| TolQ protein precursor [Azorhizobium caulinodans ORS 571]
gi|158329034|dbj|BAF86519.1| TolQ protein precursor [Azorhizobium caulinodans ORS 571]
Length = 281
Score = 196 bits (499), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 97/218 (44%), Positives = 146/218 (66%), Gaps = 1/218 (0%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
+IS+ LF+Q VK ++ L SI W++II K++ F R++ FEQ+FWSGQSL
Sbjct: 61 NISLIGLFLQAHFVVKLVMLGLVAASIWVWAIIIDKTLLFTRTRKEMDRFEQVFWSGQSL 120
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
E + +SL N +AAIF++AM EWK++ + GA+S G+ RI+++MDV I+RE+E +
Sbjct: 121 EELYRSLAGRPNQAMAAIFVAAMREWKRTYEGGAKSLTGLNQRIEKVMDVTISREVEALE 180
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCV 188
KL L ++ SAG +G+ G V G+M FQ+IA + N+ V PGI E+L + +GL
Sbjct: 181 SKLLVLATVGSAGPFIGLFGTVWGIMTSFQAIAASKNTNLAVVAPGIAEALFATAMGLIA 240
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP++I YNKF+ + + A ++EGFA+EFSAILSRQ +
Sbjct: 241 AIPATIFYNKFVHQASRQAQRLEGFADEFSAILSRQID 278
>gi|328542541|ref|YP_004302650.1| Protein transporter [polymorphum gilvum SL003B-26A1]
gi|326412287|gb|ADZ69350.1| Protein transporter protein [Polymorphum gilvum SL003B-26A1]
Length = 235
Score = 196 bits (498), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 104/222 (46%), Positives = 143/222 (64%), Gaps = 3/222 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S FALF+Q + VK ++ L S+ W++I K V F +RQ FE +FWSGQSL
Sbjct: 15 DLSFFALFLQAHIVVKLVMIGLIGASVWCWAIIFDKVVLFARTKRQMTRFETVFWSGQSL 74
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIG-IQDRIDRMMDVAIARELEEI 128
E + K+L N N +AA+F++AM EWK+S +GAR + +Q RIDR+MDV I RE+E +
Sbjct: 75 EELYKTLSNRANHSMAALFVAAMREWKRS-HEGARPALASLQQRIDRVMDVTIQREIERL 133
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
+L L ++ SA +G+ G V G+M FQ+IA S N+ V PGI E+L + LGL
Sbjct: 134 EARLLILATVGSAAPFIGLFGTVWGIMTSFQAIAASESTNLAVVAPGIAEALFATALGLL 193
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNI 229
+IP+ IAYNK D K + +MEGFA+EFSAILSRQ + I
Sbjct: 194 AAIPAVIAYNKLSTDVGKLSARMEGFADEFSAILSRQIDERI 235
>gi|154246988|ref|YP_001417946.1| Tol-Pal system TolQ [Xanthobacter autotrophicus Py2]
gi|154161073|gb|ABS68289.1| Tol-Pal system TolQ [Xanthobacter autotrophicus Py2]
Length = 274
Score = 192 bits (489), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 98/218 (44%), Positives = 144/218 (66%), Gaps = 1/218 (0%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
DIS LF+Q VK ++ L SI W++II K + F +R+ FEQ+FWSGQSL
Sbjct: 54 DISFLGLFLQAHFVVKLVMIGLITSSIWVWAIIIDKWMLFSRNKREMDRFEQVFWSGQSL 113
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
E + ++L N G+AAIF++AM EWK++ + ARS G+ R+D++M+V IARE+E +
Sbjct: 114 EDLYRTLAGRSNQGMAAIFVAAMREWKRTYEGSARSFAGLNQRLDKVMNVTIAREVERLE 173
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCV 188
+L L ++ SAG +G+ G V G+M FQSIA + ++ V PGI E+L + +GL
Sbjct: 174 SRLLVLATVGSAGPFIGLFGTVWGIMTSFQSIAASKNTSLAVVAPGIAEALFATAMGLIA 233
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP++I YNKFI + + A ++EGFA+EFSAILSRQ +
Sbjct: 234 AIPATIFYNKFISQTGRQAQRLEGFADEFSAILSRQID 271
>gi|49476144|ref|YP_034185.1| inner membrane tolQ protein [Bartonella henselae str. Houston-1]
gi|49238952|emb|CAF28250.1| inner membrane tolQ protein [Bartonella henselae str. Houston-1]
Length = 237
Score = 192 bits (488), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 92/221 (41%), Positives = 147/221 (66%), Gaps = 1/221 (0%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
I I LFMQ G VK ++ L + SI SW++I K + + +RR+ ++FE++FWSG+ LE
Sbjct: 12 IGIVHLFMQAGFVVKAVMIGLLLASIWSWAIIFDKILTYRRIRREIKQFERIFWSGKPLE 71
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
+ + K+ ++A+FM+AM EWKKS +KG + I +Q RID+ MD+ + RE +I
Sbjct: 72 DLYATCKSQRTSSISAVFMAAMVEWKKSLEKGIHTSISLQSRIDKAMDLILGRESAKIEA 131
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCVS 189
KLSFL ++ SAG +G+ G V+G+MG F SI+ + ++ + PGI E+L++ +GL +
Sbjct: 132 KLSFLATLGSAGPFIGLFGTVIGIMGSFLSISASQNTSLAIVAPGIAEALLATAIGLFAA 191
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
IP+ IAYNKF+ +S + Q+E FA+EFS I+SR+ + ++
Sbjct: 192 IPAVIAYNKFVNESAQIIAQIENFADEFSTIISRRIDETLT 232
>gi|254473148|ref|ZP_05086546.1| protein TolQ [Pseudovibrio sp. JE062]
gi|211957869|gb|EEA93071.1| protein TolQ [Pseudovibrio sp. JE062]
Length = 261
Score = 191 bits (486), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 99/217 (45%), Positives = 142/217 (65%), Gaps = 1/217 (0%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+S +LFM+ + VK ++ L S+ SW++I K V + RRQ FE +FWSGQSLE
Sbjct: 42 LSYISLFMEADIVVKIVMIGLIAASVWSWAIIFDKVVLYGRSRRQMNRFENVFWSGQSLE 101
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
+ KSL + N G++A+F++AM EWK+S + + +Q RIDR+MD+ I+RE+E + +
Sbjct: 102 ELYKSLSSRANNGMSALFVAAMREWKRSHEGDKPAIASLQQRIDRVMDLTISREVERLEK 161
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVS 189
+L FL ++ SA VG+ G V G+M F SIA + N+ V PGI E+L + LGL +
Sbjct: 162 RLLFLATIGSAAPFVGLFGTVWGIMNAFTSIAASKNTNLAVVAPGIAEALFATGLGLIAA 221
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
IP+ IAYNK DS K A +MEGFA+EFSAILSR+ +
Sbjct: 222 IPAVIAYNKLQSDSGKLAARMEGFADEFSAILSRRID 258
>gi|118588329|ref|ZP_01545738.1| tolQ Protein [Stappia aggregata IAM 12614]
gi|118439035|gb|EAV45667.1| tolQ Protein [Stappia aggregata IAM 12614]
Length = 234
Score = 190 bits (482), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 104/218 (47%), Positives = 139/218 (63%), Gaps = 3/218 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
IS FALF Q + VK ++ L S+ W++I+ K + RRQ FE +FWSGQSLE
Sbjct: 15 ISFFALFWQAHIVVKLVMLGLLGASVWCWAIIVDKIMLVGRTRRQMSRFETVFWSGQSLE 74
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIG-IQDRIDRMMDVAIARELEEIT 129
+ +L N N +AA+F++AM EWK+S +GAR IG +Q RIDR+MDV I RE E +
Sbjct: 75 ELYNTLHNRVNHSMAALFVAAMREWKRS-HEGARPAIGSLQQRIDRVMDVTIQREAERLE 133
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCV 188
+L L ++ SA +G+ G V G+M FQ+IA S N+ V PGI E+L + LGL
Sbjct: 134 SRLLILATVGSAAPFIGLFGTVWGIMTAFQAIAASESTNLAVVAPGIAEALFATALGLLA 193
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ IAYNKF D K +MEGFA+EFSAILSRQ +
Sbjct: 194 AIPAVIAYNKFSSDVGKAVARMEGFADEFSAILSRQID 231
>gi|254502321|ref|ZP_05114472.1| protein TolQ [Labrenzia alexandrii DFL-11]
gi|222438392|gb|EEE45071.1| protein TolQ [Labrenzia alexandrii DFL-11]
Length = 235
Score = 189 bits (481), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 100/222 (45%), Positives = 142/222 (63%), Gaps = 3/222 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S +ALF Q + V+ ++ L S+ W++I+ K + F +RQ FE +FWSGQSL
Sbjct: 15 DLSFYALFWQAHIVVQVVMLGLLAASVWCWAIIVDKIMIFGKTKRQMNRFETVFWSGQSL 74
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIG-IQDRIDRMMDVAIARELEEI 128
E + +L N N +AA+F++AM EWK+S +GAR IG +Q RIDR+MDV I RE E +
Sbjct: 75 EELYGTLHNRVNHSMAALFVAAMREWKRS-HEGARPAIGSLQQRIDRVMDVTIQREQERL 133
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
+L L ++ S+ +G+ G V G+M FQ+IA S N+ V PGI E+L + LGL
Sbjct: 134 ENRLLILATVGSSAPFIGLFGTVWGIMTAFQAIAASESTNLAVVAPGIAEALFATALGLL 193
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNI 229
+IP+ IAYNKF D + +MEGFA+EFSAILSRQ + +
Sbjct: 194 AAIPAVIAYNKFSSDVGRAVARMEGFADEFSAILSRQIDERV 235
>gi|240851222|ref|YP_002972625.1| inner membrane TolQ protein [Bartonella grahamii as4aup]
gi|240268345|gb|ACS51933.1| inner membrane TolQ protein [Bartonella grahamii as4aup]
Length = 237
Score = 184 bits (467), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 90/217 (41%), Positives = 141/217 (64%), Gaps = 1/217 (0%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
I + LFMQ VK ++ L + SI SW++I K + +RR+ ++FE+ FWSG++LE
Sbjct: 12 IGMLHLFMQASWIVKGVMIGLLLASIWSWAIIFDKIFTYRRIRREIKQFERTFWSGKALE 71
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
+ S K+ H ++A+FM+AM EWKKS +KG + +Q RID+ MD+ + RE E+I
Sbjct: 72 DLYASCKSQHTNSISAVFMAAMIEWKKSLEKGTHTSKSLQSRIDKAMDLTLGRESEKIES 131
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCVS 189
KLSFL ++ SAG +G+ G V+G+M F SI+ + ++ + PGI E+L++ +GL +
Sbjct: 132 KLSFLATLGSAGPFIGLFGTVIGIMESFLSISASQNTSLAIVAPGIAEALLATAIGLFAA 191
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
IP+ IAYNK +S + Q+E FA+EFS I+SR+ +
Sbjct: 192 IPAVIAYNKLTHESARIIAQIENFADEFSTIVSRRID 228
>gi|27382266|ref|NP_773795.1| tolQ protein [Bradyrhizobium japonicum USDA 110]
gi|27355437|dbj|BAC52420.1| tolQ Protein [Bradyrhizobium japonicum USDA 110]
Length = 238
Score = 183 bits (464), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 95/218 (43%), Positives = 140/218 (64%), Gaps = 1/218 (0%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S+ ALF Q VK ++ L S+ W++ I K F RR FEQ+FWSG+S+
Sbjct: 18 DVSLIALFWQAHWIVKAVMLGLLSCSVWVWAIAIDKIFLFARTRRSMDRFEQVFWSGESI 77
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
E + ++L +AA F++AM EWK+S + ARS G+Q RID++M+V+IARE+E +
Sbjct: 78 EELYRTLSAKPTHSMAACFVAAMREWKRSFESHARSVAGLQMRIDKVMNVSIAREVERLE 137
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCV 188
+L L ++ SAG VG+ G V G+M FQSIA + ++ V PGI E+L + +GL
Sbjct: 138 RRLLVLATVGSAGPFVGLFGTVWGIMSSFQSIAASKNTSLAVVAPGIAEALFATAVGLIA 197
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP++I YNKF + + A ++EGFA+EFSAILSRQ +
Sbjct: 198 AIPATIFYNKFTSEVNRQAQRLEGFADEFSAILSRQID 235
>gi|319409336|emb|CBI82980.1| tolQ protein [Bartonella schoenbuchensis R1]
Length = 237
Score = 183 bits (464), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 91/232 (39%), Positives = 147/232 (63%), Gaps = 2/232 (0%)
Query: 1 MNNYGLAIMD-ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREF 59
M + LA D + +++LFMQ VK ++ L + S+ SW++II K + +R ++F
Sbjct: 1 MAHIELASPDTLGMWSLFMQANWVVKAVMIGLILASVWSWAIIIDKIFTYRKIRYDIKQF 60
Query: 60 EQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDV 119
EQ FWSG+SLE + + +N H + +F++AM+EWKKS KG + + +Q RI++ MD+
Sbjct: 61 EQTFWSGKSLEELYVTYQNQHTNSICVVFIAAMTEWKKSLTKGVQPSLNLQSRIEKAMDL 120
Query: 120 AIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIES 178
A+ RE +I KL FL ++ SA +G+ G V+G+M F SI+ + ++ V PGI E+
Sbjct: 121 ALGRESAKIESKLGFLATLGSAAPFIGLFGTVVGIMNSFLSISASQNTSLAVVAPGIAEA 180
Query: 179 LISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
L++ +GL +IP+ IAYNK + +S + +EGFA+EFS I+SRQ + I+
Sbjct: 181 LLATAIGLLAAIPAVIAYNKLMHESTQIITHIEGFADEFSTIMSRQIDEKIT 232
>gi|299134175|ref|ZP_07027368.1| protein TolQ [Afipia sp. 1NLS2]
gi|298590922|gb|EFI51124.1| protein TolQ [Afipia sp. 1NLS2]
Length = 237
Score = 183 bits (464), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 94/218 (43%), Positives = 141/218 (64%), Gaps = 1/218 (0%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S+ ALF Q + VK ++ L S+ W++ I K + RR FEQ FWSGQS+
Sbjct: 17 DVSLIALFWQAHIVVKFVMLGLLSCSVWVWAIAIDKIFLYARTRRAMDRFEQAFWSGQSI 76
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+ + ++L +AA+F++AM EWK+S + +RS G+Q RID++M V+IARE+E +
Sbjct: 77 DDLYRALSAKPTHSMAALFVAAMREWKRSFESHSRSFAGLQTRIDKVMSVSIAREIERLD 136
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCV 188
+L L ++ SAG VG+ G V G+M FQSIA + ++ V PGI E+L + +GL
Sbjct: 137 RRLLVLATVGSAGPFVGLFGTVWGIMSSFQSIAASKNTSLAVVAPGIAEALFATAMGLIA 196
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP++I YNKFI + + A ++EGFA+EFSAILSRQ +
Sbjct: 197 AIPATIFYNKFISEVGRQAQRLEGFADEFSAILSRQID 234
>gi|49474674|ref|YP_032716.1| inner membrane tolQ protein [Bartonella quintana str. Toulouse]
gi|49240178|emb|CAF26644.1| Inner membrane tolQ protein [Bartonella quintana str. Toulouse]
Length = 237
Score = 182 bits (461), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 88/217 (40%), Positives = 143/217 (65%), Gaps = 1/217 (0%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
I + LF+Q VK I+ L + S+ SW++I +K + +R + ++FE++FWSG+ LE
Sbjct: 12 IGMLRLFIQANWVVKAIMISLLLASVWSWAIIFEKIFTYRKIRCEIKQFERIFWSGKPLE 71
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
+ + K+ ++A+FM+AM EWKKS +KG + I +Q RID+ MD+ + RE +I
Sbjct: 72 DLYSTCKSQRPSSISAVFMAAMVEWKKSLEKGIHTSISLQSRIDKAMDLTLGRESAKIES 131
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCVS 189
KLSFL ++ SAG +G+LG V+G+MG F SI+ + ++ + PGI E+L++ +GL +
Sbjct: 132 KLSFLATLGSAGPFIGLLGTVIGVMGSFLSISASQNTSLAIVAPGIAEALLATAIGLFAA 191
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
IP+ IAYNK + +S + Q+E FA+EFS I+SR+ +
Sbjct: 192 IPAVIAYNKLVNESAQIIAQIENFADEFSTIVSRRID 228
>gi|115526698|ref|YP_783609.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris BisA53]
gi|115520645|gb|ABJ08629.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris BisA53]
Length = 227
Score = 182 bits (461), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 93/218 (42%), Positives = 140/218 (64%), Gaps = 1/218 (0%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S+ ALF Q VK ++ L S+ W++ I K + + +R FEQ FWSG+S+
Sbjct: 7 DVSLIALFWQAHWVVKAVMLGLLACSVWVWAIAIDKILLYSRTKRAMDRFEQAFWSGESI 66
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+ + ++L +AA F++AM EWK+S D ARS G+Q RID++M+V+IARE+E +
Sbjct: 67 DELYRALAAKPTQSMAACFVAAMREWKRSFDSQARSVAGLQMRIDKVMNVSIAREIERLE 126
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCV 188
+L L ++ SAG VG+ G V G+M FQSIA + ++ V PGI E+L + +GL
Sbjct: 127 RRLLVLATVGSAGPFVGLFGTVWGIMSSFQSIAASKNTSLAVVAPGIAEALFATAIGLIA 186
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP++I YNKF + + A ++EGFA+EFSAILSRQ +
Sbjct: 187 AIPATIFYNKFTSEVNRQAQRLEGFADEFSAILSRQID 224
>gi|209886405|ref|YP_002290262.1| protein TolQ [Oligotropha carboxidovorans OM5]
gi|209874601|gb|ACI94397.1| protein TolQ [Oligotropha carboxidovorans OM5]
Length = 237
Score = 181 bits (459), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 91/218 (41%), Positives = 140/218 (64%), Gaps = 1/218 (0%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S+ ALF Q + VK ++ L S+ W++ I K+ + RR FEQ FWSGQS+
Sbjct: 17 DVSLIALFWQAHIVVKIVMLGLLACSVWVWAIAIDKTFLYARTRRAMDRFEQAFWSGQSI 76
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+ + ++L ++A+F++AM EWK+S + +RS G+Q RID++M V+IARE+E +
Sbjct: 77 DELYRALSAKPTHSMSALFVAAMREWKRSFESHSRSFAGLQTRIDKVMSVSIAREIERLD 136
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCV 188
+L L ++ SA VG+ G V G+M FQSIA + ++ V PGI E+L + +GL
Sbjct: 137 RRLLVLATVGSASPFVGLFGTVWGIMSSFQSIAASKNTSLAVVAPGIAEALFATAIGLIA 196
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP++I YNKF + + A ++EGFA+EFSAILSRQ +
Sbjct: 197 AIPATIFYNKFTSEVNRQAQRLEGFADEFSAILSRQID 234
>gi|319407736|emb|CBI81383.1| tolQ protein [Bartonella sp. 1-1C]
Length = 237
Score = 180 bits (457), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 89/221 (40%), Positives = 141/221 (63%), Gaps = 1/221 (0%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
I I +LFMQ VK ++ L SI SW++I K V++ +RR FE+ FWSG+SL+
Sbjct: 12 IGILSLFMQANWIVKAVMIGLIFASIWSWAIIFDKIVSYRRIRRDIHHFERNFWSGKSLD 71
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
+ + K+ N ++ +F++AM+EWKKS KG +P+ +Q RID+ MD+ + RE +I
Sbjct: 72 DLYTTYKSQRNNSMSIVFLAAMTEWKKSLSKGLPTPLSLQSRIDKAMDLTLGRESVKIES 131
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCVS 189
+L FL ++ SAG +G+ G V+G+M F SI+ + ++ + PGI E+L++ +GL +
Sbjct: 132 RLGFLATLGSAGPFIGLFGTVVGIMNSFLSISASQNTSLAIVAPGIAEALLATAIGLFAA 191
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
IP+ IAYNK I +S + ++E FA+EFS ILSR+ + S
Sbjct: 192 IPAVIAYNKLISESGQIIAKIENFADEFSTILSRRIDETTS 232
>gi|319404772|emb|CBI78373.1| tolQ protein [Bartonella rochalimae ATCC BAA-1498]
Length = 237
Score = 180 bits (456), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 89/221 (40%), Positives = 140/221 (63%), Gaps = 1/221 (0%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
I I +LFMQ VK ++ L SI SW++I K V++ +RR FE+ FWSGQSL+
Sbjct: 12 IGILSLFMQANWIVKAVMLGLIFASIWSWAIIFDKIVSYRRIRRDIHHFERNFWSGQSLD 71
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
+ + K+ N ++ +F++AM+EWKKS KG +P+ +Q RID+ MD+ + RE +I
Sbjct: 72 DLYSTYKSQRNNSMSIVFLAAMTEWKKSLSKGLPTPLSLQSRIDKAMDLTLGRESVKIES 131
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCVS 189
+L FL ++ SAG +G+ G V+G+M F SI+ + ++ + PGI E+L++ +GL +
Sbjct: 132 RLGFLATLGSAGPFIGLFGTVVGIMNSFLSISASQNTSLAIVAPGIAEALLATAIGLFAA 191
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
IP+ IAYNK +S + ++E FA+EFS ILSR+ + S
Sbjct: 192 IPAVIAYNKLTSESGQIIAKIENFADEFSTILSRRIDETTS 232
>gi|312115994|ref|YP_004013590.1| protein TolQ [Rhodomicrobium vannielii ATCC 17100]
gi|311221123|gb|ADP72491.1| protein TolQ [Rhodomicrobium vannielii ATCC 17100]
Length = 226
Score = 180 bits (456), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 87/218 (39%), Positives = 138/218 (63%), Gaps = 1/218 (0%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D S LF+Q VK ++ L + S+ WS++I+K++ F ++Q EFE++FWSGQSL
Sbjct: 6 DFSFLGLFLQAHPVVKFVMIGLILASVWCWSIVIEKTIAFRRAKKQTEEFERVFWSGQSL 65
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+ + ++ +AA+F +AM EW++S D A+ G+Q RI+R+M+V I RE+E +
Sbjct: 66 DELYLAMPQKPTSAMAALFQAAMREWRRSIDGTAKPLPGVQMRIERVMEVTITREMERLE 125
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCV 188
+L FL ++ + +G+ G V G+M FQ IA + N+ V PGI E+L + LGL
Sbjct: 126 ARLLFLATVGAVAPFIGLFGTVWGIMTAFQGIAASKNTNLAVVAPGIAEALFATALGLLA 185
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ I YN F + + + A ++EGFA+EFSAI+SRQ +
Sbjct: 186 AIPAVIFYNAFQQSASRLAQRLEGFADEFSAIVSRQLD 223
>gi|319899379|ref|YP_004159476.1| tolQ protein [Bartonella clarridgeiae 73]
gi|319403347|emb|CBI76906.1| tolQ protein [Bartonella clarridgeiae 73]
Length = 238
Score = 179 bits (454), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 87/221 (39%), Positives = 141/221 (63%), Gaps = 1/221 (0%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
I I LFMQ VK ++ L SI SW++I+ K +++ +RR FE+ FWSGQ LE
Sbjct: 13 IGILNLFMQANWIVKVVMIGLVFASIWSWAIILDKLISYRHIRRNIHHFERDFWSGQPLE 72
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
+ + + + ++ +F++AM+EWKKS KG+ +P+ +Q RID+ MD+A+ RE +I
Sbjct: 73 DLYATYNSQRSDSISVVFLAAMTEWKKSLSKGSHTPLSLQTRIDKAMDLALGRESVKIES 132
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCVS 189
+L FL ++ SAG +G+ G V+G+M F SI+ + ++ + PGI E+L++ +GL +
Sbjct: 133 RLGFLATLGSAGPFIGLFGTVVGIMNSFLSISASQNTSLAIVAPGIAEALLATAIGLFAA 192
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
IP+ IAYNK I +S + ++E F++EFS ILSR+ + S
Sbjct: 193 IPAVIAYNKLISESAQIIAKIENFSDEFSTILSRRIDETTS 233
>gi|90426225|ref|YP_534595.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris BisB18]
gi|90108239|gb|ABD90276.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris BisB18]
Length = 237
Score = 178 bits (451), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 93/222 (41%), Positives = 143/222 (64%), Gaps = 1/222 (0%)
Query: 6 LAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS 65
LA D+S+ ALF+Q VK ++ L S+ W++ I K + + +R FEQ FWS
Sbjct: 13 LASSDVSLIALFLQAHWVVKAVMLGLLGCSVWVWAIAIDKMLLYSRTKRAMDRFEQAFWS 72
Query: 66 GQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
G+S++ + ++L +AA F++AM EWK+S + ARS G+Q RI+++M+V+IARE+
Sbjct: 73 GESIDELYRALSAKPTQSMAACFVAAMREWKRSFESQARSFAGLQMRIEKVMNVSIAREV 132
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILL 184
E + +L L ++ SAG VG+ G V G+M FQSIA + ++ V PGI E+L + +
Sbjct: 133 ERLERRLLVLATVGSAGPFVGLFGTVWGIMSSFQSIAASKNTSLAVVAPGIAEALFATAI 192
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
GL +IP++I YNKF + + A ++EGFA+EFSAILSRQ +
Sbjct: 193 GLIAAIPATIFYNKFASEVNRQAQRLEGFADEFSAILSRQID 234
>gi|75676904|ref|YP_319325.1| MotA/TolQ/ExbB proton channel [Nitrobacter winogradskyi Nb-255]
gi|74421774|gb|ABA05973.1| Cell division and transport-associated protein TolQ [Nitrobacter
winogradskyi Nb-255]
Length = 237
Score = 177 bits (450), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 92/222 (41%), Positives = 140/222 (63%), Gaps = 1/222 (0%)
Query: 6 LAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS 65
LA D+S+ LF VK ++ L S+ W++ I K+ + +R FEQ FWS
Sbjct: 13 LASADVSLITLFFHAHWIVKAVMLGLLACSVWVWAIAIDKTFLYARTKRAMDRFEQAFWS 72
Query: 66 GQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
G+S+E + ++L +AA F++AM EWK+S + ARS G+Q RI+++M+V+IARE+
Sbjct: 73 GESIEDLYRALSAKPTQSMAACFVAAMREWKRSFESQARSIAGLQMRIEKVMNVSIAREV 132
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILL 184
E + +L L ++ SAG VG+ G V G+M FQSIA + ++ V PGI E+L + +
Sbjct: 133 ERLERRLLVLATVGSAGPFVGLFGTVWGIMSSFQSIAASKNTSLAVVAPGIAEALFATAI 192
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
GL +IP++I YNKF + + A ++EGFA+EFSAILSRQ +
Sbjct: 193 GLIAAIPATIFYNKFTAEVNRQAQRLEGFADEFSAILSRQID 234
>gi|148258092|ref|YP_001242677.1| TolQ protein [Bradyrhizobium sp. BTAi1]
gi|146410265|gb|ABQ38771.1| Cell division and transport-associated protein TolQ [Bradyrhizobium
sp. BTAi1]
Length = 237
Score = 177 bits (450), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 93/218 (42%), Positives = 139/218 (63%), Gaps = 1/218 (0%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S+ ALF Q VK ++ L S+ W++ I K + RR FEQ FWSG+S+
Sbjct: 17 DVSLIALFWQAHWVVKGVMLGLITCSVWVWAIAIDKLFLYSRTRRSMDRFEQAFWSGESI 76
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
E + ++L +AA F++AM EWK+S + ARS G+Q RI+++M+V+IARE+E +
Sbjct: 77 EELYRALSAKPTQSMAACFVAAMREWKRSFEGHARSFAGLQMRIEKVMNVSIAREVERLE 136
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCV 188
+L L ++ SAG VG+ G V G+M FQSIA + ++ V PGI E+L + +GL
Sbjct: 137 RRLLVLATVGSAGPFVGLFGTVWGIMSSFQSIAASKNTSLAVVAPGIAEALFATAIGLIA 196
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP++I YNKF + + A ++EGFA+EFSAILSRQ +
Sbjct: 197 AIPATIFYNKFTSEVNRQAQRLEGFADEFSAILSRQID 234
>gi|121602265|ref|YP_988485.1| protein TolQ [Bartonella bacilliformis KC583]
gi|120614442|gb|ABM45043.1| protein TolQ [Bartonella bacilliformis KC583]
Length = 235
Score = 177 bits (449), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 87/221 (39%), Positives = 144/221 (65%), Gaps = 1/221 (0%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
I ++ALF+Q VK ++ L + SI SW++I+ K + +RR R FE+ FWSG+SLE
Sbjct: 12 IGMWALFIQANWVVKAVMIGLVLASIWSWTIILHKIFAYRKIRRDIRHFEKFFWSGKSLE 71
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
+ + +N ++A+F++AM+EWKKS KG + +Q RI++ MD+AI RE ++I
Sbjct: 72 ELYTAYQNKPLNNISAVFIAAMTEWKKSLTKGIHTSPSLQIRIEKAMDLAIGRESKKIES 131
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCVS 189
KL +L ++ SA +G+ G V+G+M F SI+ + ++ + PGI E+L++ +GL V+
Sbjct: 132 KLGYLATLGSAAPFIGLFGTVIGIMNSFLSISASQNTSLAIVAPGIAEALLATAIGLMVA 191
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
IP+ + YNKFI +S + Q+E FA+EFS I+SR+ + ++
Sbjct: 192 IPAVVFYNKFIGESAQIIAQIEDFADEFSTIISRRIDEKVT 232
>gi|85714383|ref|ZP_01045371.1| MotA/TolQ/ExbB proton channel [Nitrobacter sp. Nb-311A]
gi|85698830|gb|EAQ36699.1| MotA/TolQ/ExbB proton channel [Nitrobacter sp. Nb-311A]
Length = 237
Score = 177 bits (448), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 92/222 (41%), Positives = 139/222 (62%), Gaps = 1/222 (0%)
Query: 6 LAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS 65
LA D+S+ LF VK ++ L S+ W++ I K + +R FEQ FWS
Sbjct: 13 LASADVSLITLFFHAHWIVKAVMLGLLACSVWVWAIAIDKMFLYTRTKRAMDRFEQAFWS 72
Query: 66 GQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
G+S+E + ++L +AA F++AM EWK+S + ARS G+Q RI+++M+V+IARE+
Sbjct: 73 GESIEDLYRALSAKPTQSMAACFVAAMREWKRSFESQARSIAGLQMRIEKVMNVSIAREI 132
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILL 184
E + +L L ++ SAG VG+ G V G+M FQSIA + ++ V PGI E+L + +
Sbjct: 133 ERLERRLLVLATVGSAGPFVGLFGTVWGIMSSFQSIAASKNTSLAVVAPGIAEALFATAI 192
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
GL +IP++I YNKF + + A ++EGFA+EFSAILSRQ +
Sbjct: 193 GLIAAIPATIFYNKFTAEVNRQAQRLEGFADEFSAILSRQID 234
>gi|319406259|emb|CBI79896.1| tolQ protein [Bartonella sp. AR 15-3]
Length = 237
Score = 176 bits (446), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 87/221 (39%), Positives = 139/221 (62%), Gaps = 1/221 (0%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
I I +LFMQ VK ++ L SI SW++I K +++ +RR FE+ FWSGQSLE
Sbjct: 12 IGILSLFMQANWIVKAVMIGLIFASIWSWAIIFDKFISYRRIRRNIHHFERNFWSGQSLE 71
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
+ + + N ++ +F++AM+EWKKS KG+ + + +Q RID+ MD+ + RE +I
Sbjct: 72 DLYATYNSQRNNSISIVFLAAMAEWKKSLSKGSPTSLNLQSRIDKAMDLTLGRESVKIES 131
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCVS 189
+L FL ++ SAG +G+ G V+G+M F SI+ + ++ + PGI E+L++ +GL +
Sbjct: 132 RLGFLATLGSAGPFIGLFGTVVGIMNSFLSISASQNTSLAIVAPGIAEALLATAIGLFAA 191
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
IP+ IAYNK +S + ++E FA+EFS ILSR+ + S
Sbjct: 192 IPAVIAYNKLTSESAQIIAKIENFADEFSTILSRRIDETTS 232
>gi|323138234|ref|ZP_08073306.1| protein TolQ [Methylocystis sp. ATCC 49242]
gi|322396486|gb|EFX99015.1| protein TolQ [Methylocystis sp. ATCC 49242]
Length = 247
Score = 175 bits (443), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 92/219 (42%), Positives = 142/219 (64%), Gaps = 2/219 (0%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
DI+I+++F + VK ++ L + S+ W++II K++ F +RR FE+ FWSG SL
Sbjct: 17 DITIWSMFWGAHIVVKFVMVGLLLASVWCWAIIIDKTLLFSRMRRAMDRFEESFWSGNSL 76
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSP-IGIQDRIDRMMDVAIARELEEI 128
E + L G+A +F++AM EWK+S GA + +G+Q RI++++DV+IARE+E++
Sbjct: 77 EELYGKLSERPTTGMATLFVAAMREWKRSFQSGASASFMGLQARIEKVLDVSIAREVEKL 136
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
L L +++SAG VG+ G V G+M F+SIA + ++ V PGI E+L++ +GL
Sbjct: 137 ESNLLVLATVASAGPFVGLFGTVWGIMTSFRSIAASKNTSLAVVAPGIAEALLATAIGLF 196
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ IAYNK D K +ME FA+EFSAILSRQ +
Sbjct: 197 AAIPALIAYNKMQGDVAKAQARMESFADEFSAILSRQID 235
>gi|154252566|ref|YP_001413390.1| Tol-Pal system TolQ [Parvibaculum lavamentivorans DS-1]
gi|154156516|gb|ABS63733.1| Tol-Pal system TolQ [Parvibaculum lavamentivorans DS-1]
Length = 241
Score = 175 bits (443), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 86/219 (39%), Positives = 140/219 (63%), Gaps = 1/219 (0%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
+D S++ LF++ L VK ++ L S+ SW++I K F + R+ +FE++FWSG+S
Sbjct: 20 LDFSMWGLFLRADLVVKLVMLGLLFASVWSWAIIFDKWWRFARVERRADQFERIFWSGRS 79
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
L+ + + + + L+A+F++AM EW++S D A S +G+++R+D++M V I+RE+ +
Sbjct: 80 LDELYQEMGHRPQHPLSALFIAAMREWRRSQDVVASSFVGLKERVDKVMQVTISREMMNL 139
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
+L FL ++ S +G+ G V G+M FQSIA N+ V PGI E+L + LGL
Sbjct: 140 ESRLLFLATVGSVAPFIGLFGTVWGIMNSFQSIAISRDTNLAVVAPGIAEALFATALGLV 199
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ +AYN+F S + +ME FA+EFSAILSRQ +
Sbjct: 200 AAIPAVVAYNRFSNQSSRIGQRMESFADEFSAILSRQLD 238
>gi|163854159|ref|YP_001642202.1| protein TolQ [Methylobacterium extorquens PA1]
gi|163665764|gb|ABY33131.1| protein TolQ [Methylobacterium extorquens PA1]
Length = 238
Score = 174 bits (442), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 91/224 (40%), Positives = 136/224 (60%), Gaps = 1/224 (0%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
+ D+S+F LF Q VK ++ L SI WS+I+ K++ F + FE+ FWSG+
Sbjct: 12 VADMSLFGLFWQAHFVVKLVMVGLLGASIWCWSIIVDKTLLFRRTEAEMDAFEEAFWSGR 71
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
SLE + +S + GL A+F++AM EWK+S + R + RID+++DV I RE+E
Sbjct: 72 SLEELYRSFNDRQPTGLGALFVAAMREWKRSFEGSGRQIHSLSQRIDKVLDVTIQREVER 131
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
+ +L FL S+ SAG +G+ G V G+M F SIA + ++ V PGI E+L + +GL
Sbjct: 132 LDSRLLFLASIGSAGPYIGLFGTVWGIMTAFTSIAASKNTSLAVVAPGIAEALFATAIGL 191
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
+IP+ +AYNK K ++EGFA+EFSAILSRQ + +S
Sbjct: 192 FAAIPAVLAYNKLQATVSKSQSRLEGFADEFSAILSRQIDERLS 235
>gi|218533104|ref|YP_002423920.1| protein TolQ [Methylobacterium chloromethanicum CM4]
gi|254564127|ref|YP_003071222.1| TolA-TolQ-TolR complex membrane anchored protein [Methylobacterium
extorquens DM4]
gi|218525407|gb|ACK85992.1| protein TolQ [Methylobacterium chloromethanicum CM4]
gi|254271405|emb|CAX27418.1| membrane spanning protein in TolA-TolQ-TolR complex
[Methylobacterium extorquens DM4]
Length = 238
Score = 174 bits (442), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 91/224 (40%), Positives = 136/224 (60%), Gaps = 1/224 (0%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
+ D+S+F LF Q VK ++ L SI WS+I+ K++ F + FE+ FWSG+
Sbjct: 12 VADMSLFGLFWQAHFVVKLVMVGLLGASIWCWSIIVDKTLLFRRTEAEMDAFEEAFWSGR 71
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
SLE + +S + GL A+F++AM EWK+S + R + RID+++DV I RE+E
Sbjct: 72 SLEELYRSFNDRQPTGLGALFVAAMREWKRSFEGSGRQIHSLSQRIDKVLDVTIQREVER 131
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
+ +L FL S+ SAG +G+ G V G+M F SIA + ++ V PGI E+L + +GL
Sbjct: 132 LDSRLLFLASIGSAGPYIGLFGTVWGIMTAFTSIAASKNTSLAVVAPGIAEALFATAIGL 191
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
+IP+ +AYNK K ++EGFA+EFSAILSRQ + +S
Sbjct: 192 FAAIPAVLAYNKLQATVAKSQSRLEGFADEFSAILSRQIDERLS 235
>gi|240141618|ref|YP_002966098.1| membrane spanning protein in TolA-TolQ-TolR complex
[Methylobacterium extorquens AM1]
gi|240011595|gb|ACS42821.1| membrane spanning protein in TolA-TolQ-TolR complex
[Methylobacterium extorquens AM1]
Length = 232
Score = 174 bits (441), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 91/224 (40%), Positives = 136/224 (60%), Gaps = 1/224 (0%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
+ D+S+F LF Q VK ++ L SI WS+I+ K++ F + FE+ FWSG+
Sbjct: 6 VADMSLFGLFWQAHFVVKLVMVGLLGASIWCWSIIVDKTLLFRRTEAEMDAFEEAFWSGR 65
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
SLE + +S + GL A+F++AM EWK+S + R + RID+++DV I RE+E
Sbjct: 66 SLEELYRSFNDRQPTGLGALFVAAMREWKRSFEGSGRQIHSLSQRIDKVLDVTIQREVER 125
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
+ +L FL S+ SAG +G+ G V G+M F SIA + ++ V PGI E+L + +GL
Sbjct: 126 LDSRLLFLASIGSAGPYIGLFGTVWGIMTAFTSIAASKNTSLAVVAPGIAEALFATAIGL 185
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
+IP+ +AYNK K ++EGFA+EFSAILSRQ + +S
Sbjct: 186 FAAIPAVLAYNKLQATVAKSQSRLEGFADEFSAILSRQIDERLS 229
>gi|170741559|ref|YP_001770214.1| protein TolQ [Methylobacterium sp. 4-46]
gi|168195833|gb|ACA17780.1| protein TolQ [Methylobacterium sp. 4-46]
Length = 238
Score = 174 bits (441), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 90/227 (39%), Positives = 140/227 (61%), Gaps = 1/227 (0%)
Query: 5 GLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFW 64
L + +I++F LF Q + VK ++ L S+ W++I+ K++ F + + FE+ FW
Sbjct: 9 ALPVHEITLFGLFWQAHVVVKVVMLGLLGASVWCWAIIVDKTLLFRRAKAEMDAFEESFW 68
Query: 65 SGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARE 124
SG+SLE + +S + GLAA+F++AM EWK+S + RS + RID+++DV I RE
Sbjct: 69 SGRSLEELYRSFHDKAPTGLAAVFVAAMREWKRSFEGSGRSIQSLSQRIDKVLDVTIQRE 128
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISIL 183
+E +L FL S+ SAG +G+ G V G+M F SIA + ++ V PGI E+L +
Sbjct: 129 VERFESRLLFLASIGSAGPYIGLFGTVWGIMTAFTSIAASKNTSLAVVAPGIAEALFATA 188
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
+GL +IP+ +AYNK K ++EGFA+EFSAILSRQ + ++
Sbjct: 189 IGLFAAIPAVLAYNKLQASVGKLQGRLEGFADEFSAILSRQIDERLA 235
>gi|300023933|ref|YP_003756544.1| protein TolQ [Hyphomicrobium denitrificans ATCC 51888]
gi|299525754|gb|ADJ24223.1| protein TolQ [Hyphomicrobium denitrificans ATCC 51888]
Length = 238
Score = 174 bits (441), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 91/216 (42%), Positives = 139/216 (64%), Gaps = 1/216 (0%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLET 71
S LFMQ L VK ++T L + SI SW++I +K + F R + +FEQ+FWSGQSL+
Sbjct: 20 SFIELFMQASLVVKIVMTGLGLASIWSWAIIFEKLLAFRRARVESDKFEQMFWSGQSLDE 79
Query: 72 VCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEK 131
+ +L I +AA+F++AM EWK+S + R+ GIQ R++++MDV I+RE+E + +
Sbjct: 80 LYANLSRGRTITMAALFVAAMREWKRSVEGNIRALGGIQLRVEKVMDVTISREMERLDRR 139
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSI 190
L FL ++ S VG+ G V G+M FQSIA + ++ V PGI E+L + LGL +I
Sbjct: 140 LLFLATVGSTAPFVGLFGTVWGIMTSFQSIAVSKNTSLAVVAPGIAEALFATALGLMAAI 199
Query: 191 PSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
P+ + YNKF DS + ++ F++EF+AI+SRQ +
Sbjct: 200 PAVVFYNKFSADSSAISQRLYAFSDEFAAIVSRQID 235
>gi|188584488|ref|YP_001927933.1| protein TolQ [Methylobacterium populi BJ001]
gi|179347986|gb|ACB83398.1| protein TolQ [Methylobacterium populi BJ001]
Length = 238
Score = 174 bits (441), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 91/224 (40%), Positives = 136/224 (60%), Gaps = 1/224 (0%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
+ D+S+F LF Q VK ++ L SI WS+I+ K++ F + FE+ FWSG+
Sbjct: 12 VADMSLFGLFWQAHFVVKIVMMGLLGASIWCWSIIVDKTLLFRRTEAEMDAFEEAFWSGR 71
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
SLE + +S + GL A+F++AM EWK+S + R + RID+++DV I RE+E
Sbjct: 72 SLEELYRSFNDRQPTGLGALFVAAMREWKRSFEGSGRQIHSLSQRIDKVLDVTIQREVER 131
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
+ +L FL S+ SAG +G+ G V G+M F SIA + ++ V PGI E+L + +GL
Sbjct: 132 LDSRLLFLASIGSAGPYIGLFGTVWGIMTAFTSIAASKNTSLAVVAPGIAEALFATAIGL 191
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
+IP+ +AYNK K ++EGFA+EFSAILSRQ + +S
Sbjct: 192 FAAIPAVLAYNKLQASVAKSQSRLEGFADEFSAILSRQIDERLS 235
>gi|163869134|ref|YP_001610373.1| tolQ protein [Bartonella tribocorum CIP 105476]
gi|161018820|emb|CAK02378.1| tolQ protein [Bartonella tribocorum CIP 105476]
Length = 237
Score = 174 bits (440), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 89/210 (42%), Positives = 139/210 (66%), Gaps = 1/210 (0%)
Query: 16 LFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKS 75
LFMQ L VK ++ LL + S+ SW++I K + +RR+ ++FE+ FWSG++LE + S
Sbjct: 17 LFMQASLVVKVVMVLLLLASVWSWAIIFDKIFTYRRIRREIKQFERTFWSGKALEDLYAS 76
Query: 76 LKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFL 135
K+ ++A+FM+AM EWKKS +KG + +Q RID+ MD+ + RE E+I KLSFL
Sbjct: 77 CKSQRTNSISAVFMAAMVEWKKSLEKGTHTSTSLQSRIDKAMDLTLGRESEKIESKLSFL 136
Query: 136 GSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCVSIPSSI 194
++ SAG +G+ G V+G+M F SI+ + ++ + PGI E+L++ +GL +IP+ I
Sbjct: 137 ATLGSAGPFIGLFGTVIGIMESFLSISASQNTSLAIVAPGIAEALLATAIGLFAAIPAVI 196
Query: 195 AYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
AYNK +S + Q+E FA+EFS I+SR+
Sbjct: 197 AYNKLTHESARIIAQIENFADEFSTIVSRR 226
>gi|220924304|ref|YP_002499606.1| protein TolQ [Methylobacterium nodulans ORS 2060]
gi|219948911|gb|ACL59303.1| protein TolQ [Methylobacterium nodulans ORS 2060]
Length = 238
Score = 174 bits (440), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 90/227 (39%), Positives = 139/227 (61%), Gaps = 1/227 (0%)
Query: 5 GLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFW 64
L + +I++F LF Q VK ++ L S+ W++I+ K++ F R + FE+ FW
Sbjct: 9 ALPVHEITLFGLFWQAHFVVKVVMLGLLGASVWCWAIIVDKTLLFRRTRAEMDAFEESFW 68
Query: 65 SGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARE 124
SG+SLE + +S + GL A+F++AM EWK+S + RS + RID+++DV I RE
Sbjct: 69 SGRSLEELYRSFNDKAPTGLGAVFVAAMREWKRSFEGSGRSIHSLGQRIDKVLDVTIQRE 128
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISIL 183
+E + +L FL S+ SAG +G+ G V G+M F SIA + ++ V PGI E+L +
Sbjct: 129 VERLESRLLFLASIGSAGPYIGLFGTVWGIMTAFTSIAASKNTSLAVVAPGIAEALFATA 188
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
+GL +IP+ +AYNK K ++EGFA+EFSAILSRQ + ++
Sbjct: 189 IGLFAAIPAVLAYNKLQASVAKAQGRLEGFADEFSAILSRQIDERLA 235
>gi|218513591|ref|ZP_03510431.1| protein transporter protein [Rhizobium etli 8C-3]
Length = 167
Score = 173 bits (439), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 81/163 (49%), Positives = 117/163 (71%)
Query: 7 AIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG 66
A D+S+++LFMQ G+ VK ++ L S+ +W+++I K + + RRQF +FEQ+FWSG
Sbjct: 4 ATTDVSLWSLFMQAGIVVKLVMLGLIAASVWTWAIVIDKYLAYGRARRQFDKFEQVFWSG 63
Query: 67 QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
QSLE + +SL +N GLA+IF++AM EWKKS ++GARSPIG+Q RIDR MDV +ARE E
Sbjct: 64 QSLEELYRSLSERNNTGLASIFVAAMREWKKSFERGARSPIGLQMRIDRAMDVTLARETE 123
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
+ +L L ++ SAG +G+ G V+G+M FQ+IAG S N+
Sbjct: 124 YLGARLGSLATIGSAGPFIGLFGTVVGIMTSFQAIAGSKSTNL 166
>gi|92118975|ref|YP_578704.1| MotA/TolQ/ExbB proton channel [Nitrobacter hamburgensis X14]
gi|91801869|gb|ABE64244.1| Cell division and transport-associated protein TolQ [Nitrobacter
hamburgensis X14]
Length = 237
Score = 173 bits (438), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 91/222 (40%), Positives = 138/222 (62%), Gaps = 1/222 (0%)
Query: 6 LAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS 65
LA D+S+ LF VK ++ L S+ W++ I K + +R FEQ FWS
Sbjct: 13 LASADVSLITLFFHAHWIVKAVMLGLLGCSVWVWAIAIDKMFLYARTKRAMDRFEQAFWS 72
Query: 66 GQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
G+S+E + ++L +AA F++AM EWK+S + RS G+Q RI+++M+V+IARE+
Sbjct: 73 GESIEDLYRALSAKPTQSMAACFVAAMREWKRSFESQTRSFAGLQMRIEKVMNVSIAREI 132
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILL 184
E + +L L ++ SAG VG+ G V G+M FQSIA + ++ V PGI E+L + +
Sbjct: 133 ERLERRLLVLATVGSAGPFVGLFGTVWGIMSSFQSIAASKNTSLAVVAPGIAEALFATAV 192
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
GL +IP++I YNKF + + A ++EGFA+EFSAILSRQ +
Sbjct: 193 GLIAAIPATIFYNKFTSEVNRQAQRLEGFADEFSAILSRQID 234
>gi|316932661|ref|YP_004107643.1| protein TolQ [Rhodopseudomonas palustris DX-1]
gi|315600375|gb|ADU42910.1| protein TolQ [Rhodopseudomonas palustris DX-1]
Length = 236
Score = 172 bits (437), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 90/218 (41%), Positives = 138/218 (63%), Gaps = 1/218 (0%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S+ +LF VK I+ L S+ W++ I K + F RR FEQ FWSG+S+
Sbjct: 16 DVSLLSLFWHAHWVVKSIMLGLLGCSVWVWAIAIDKLLLFSRTRRAMDRFEQAFWSGESI 75
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+ + ++L +AA F++AM EWK+S + +RS G+Q RI+++M+V+IARE+E +
Sbjct: 76 DELYRALSAKPTHSMAACFVAAMREWKRSFESHSRSFAGLQMRIEKVMNVSIAREVERLE 135
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCV 188
+L L ++ SAG VG+ G V G+M FQSIA + ++ V PGI E+L + +GL
Sbjct: 136 RRLLVLATVGSAGPFVGLFGTVWGIMSSFQSIAASKNTSLAVVAPGIAEALFATAIGLIA 195
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP++I YNKF + + ++EGFA+EFSAILSRQ +
Sbjct: 196 AIPATIFYNKFTSEVNRQTQRLEGFADEFSAILSRQID 233
>gi|296447813|ref|ZP_06889726.1| protein TolQ [Methylosinus trichosporium OB3b]
gi|296254672|gb|EFH01786.1| protein TolQ [Methylosinus trichosporium OB3b]
Length = 246
Score = 172 bits (435), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 87/219 (39%), Positives = 141/219 (64%), Gaps = 1/219 (0%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
++ISI+ +F+ + VK ++ L SI W++I+ K + F RR FE++FWSG S
Sbjct: 15 VEISIWGMFLGAHIVVKLVMIGLLAASIWCWAIIVDKVILFTRTRRAMDRFEEVFWSGSS 74
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
LE + L++ +A++F++AM EWK+S S +G+Q RID+++DV+IARE+E++
Sbjct: 75 LEDLYSKLQDRPTGAMASLFVAAMREWKRSFQTAGASFMGLQARIDKVLDVSIAREVEKL 134
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
L L +++SAG VG+ G V G+M F+SIA + ++ V PGI E+L++ +GL
Sbjct: 135 ESNLLVLATVASAGPFVGLFGTVWGIMTSFRSIAASKNTSLAVVAPGIAEALLATAIGLF 194
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ +AYNK D + +++ FA+EFSAILSRQ +
Sbjct: 195 AAIPALVAYNKLQGDVARAQARLDSFADEFSAILSRQID 233
>gi|91978611|ref|YP_571270.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris BisB5]
gi|91685067|gb|ABE41369.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris BisB5]
Length = 227
Score = 171 bits (434), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 89/218 (40%), Positives = 139/218 (63%), Gaps = 1/218 (0%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S+ ALF Q VK ++ L S+ W++ I K + + +R FEQ FWSG+S+
Sbjct: 7 DVSLIALFWQAHWIVKSVMLGLIGCSVWVWAIAIDKLLLYSRTKRAMDRFEQAFWSGESI 66
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+ + ++L +AA F++AM EWK+S + +RS G+Q RI+++M+V+IARE+E +
Sbjct: 67 DDLYRTLSAKPTHSMAACFVAAMREWKRSFESQSRSFAGLQMRIEKVMNVSIAREVERLE 126
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCV 188
+L L ++ SAG VG+ G V G+M FQSIA + ++ V PGI E+L + +GL
Sbjct: 127 RRLLVLATVGSAGPFVGLFGTVWGIMSSFQSIAASKNTSLAVVAPGIAEALFATAVGLIA 186
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP++I YNKF + + ++EGFA+EFSAILSRQ +
Sbjct: 187 AIPATIFYNKFTSEVNRQTQRLEGFADEFSAILSRQID 224
>gi|39934192|ref|NP_946468.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris CGA009]
gi|192289718|ref|YP_001990323.1| protein TolQ [Rhodopseudomonas palustris TIE-1]
gi|39648040|emb|CAE26560.1| TolQ protein, inner membrane protein, tolerance to group A colicins
[Rhodopseudomonas palustris CGA009]
gi|192283467|gb|ACE99847.1| protein TolQ [Rhodopseudomonas palustris TIE-1]
Length = 236
Score = 171 bits (433), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 89/218 (40%), Positives = 138/218 (63%), Gaps = 1/218 (0%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S+ +LF VK I+ L S+ W++ I K + F +R FEQ FWSG+S+
Sbjct: 16 DVSLLSLFWHAHWVVKSIMLGLLGCSVWVWAIAIDKLLLFSRTKRAMDRFEQAFWSGESI 75
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+ + ++L +AA F++AM EWK+S + +RS G+Q RI+++M+V+IARE+E +
Sbjct: 76 DELYRALSAKPTHSMAACFVAAMREWKRSFESHSRSFAGLQMRIEKVMNVSIAREVERLE 135
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCV 188
+L L ++ SAG VG+ G V G+M FQSIA + ++ V PGI E+L + +GL
Sbjct: 136 RRLLVLATVGSAGPFVGLFGTVWGIMSSFQSIAASKNTSLAVVAPGIAEALFATAIGLIA 195
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP++I YNKF + + ++EGFA+EFSAILSRQ +
Sbjct: 196 AIPATIFYNKFTSEVNRQTQRLEGFADEFSAILSRQID 233
>gi|146338266|ref|YP_001203314.1| TolQ protein [Bradyrhizobium sp. ORS278]
gi|146191072|emb|CAL75077.1| TolQ protein [Bradyrhizobium sp. ORS278]
Length = 234
Score = 171 bits (432), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 93/217 (42%), Positives = 136/217 (62%), Gaps = 1/217 (0%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+S+ LF G V+ I+ L SI W++ I K F RR FEQ FWSG+S+E
Sbjct: 15 LSLIELFANAGWVVRIIMLGLISCSIWVWAIAIDKMFLFSRTRRSMDRFEQAFWSGESIE 74
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
+ + L +AA F++AM EWK+S + ARS G+Q RI+++M+V+IARE+E +
Sbjct: 75 ELYRVLSAKPTQSMAACFVAAMREWKRSFEGHARSFAGLQMRIEKVMNVSIAREVERLER 134
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVS 189
+L L ++ SAG VG+ G V G+M FQSIA + ++ V PGI E+L + +GL +
Sbjct: 135 RLLVLATVGSAGPFVGLFGTVWGIMTSFQSIAASKNTSLAVVAPGIAEALFATAIGLIAA 194
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
IP++I YNKF + + A ++EGFA+EFSAILSRQ +
Sbjct: 195 IPATIFYNKFSSEVNRQAQRLEGFADEFSAILSRQID 231
>gi|86748932|ref|YP_485428.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris HaA2]
gi|86571960|gb|ABD06517.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris HaA2]
Length = 237
Score = 169 bits (429), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 88/218 (40%), Positives = 138/218 (63%), Gaps = 1/218 (0%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S+ LF Q VK ++ L S+ W++ I K + + +R FEQ FWSG+S+
Sbjct: 17 DMSLIGLFWQAHWIVKSVMLGLIGCSVWVWAIAIDKLILYSRTKRAMDRFEQAFWSGESI 76
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+ + ++L +AA F++AM EWK+S + +RS G+Q RI+++M+V+IARE+E +
Sbjct: 77 DDLYRTLSAKPTHSMAACFVAAMREWKRSFESHSRSFAGLQMRIEKVMNVSIAREVERLE 136
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCV 188
+L L ++ SAG VG+ G V G+M FQSIA + ++ V PGI E+L + +GL
Sbjct: 137 RRLLVLATVGSAGPFVGLFGTVWGIMSSFQSIAASKNTSLAVVAPGIAEALFATAIGLIA 196
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP++I YNKF + + ++EGFA+EFSAILSRQ +
Sbjct: 197 AIPATIFYNKFTSEVNRQTQRLEGFADEFSAILSRQID 234
>gi|170747181|ref|YP_001753441.1| protein TolQ [Methylobacterium radiotolerans JCM 2831]
gi|170653703|gb|ACB22758.1| protein TolQ [Methylobacterium radiotolerans JCM 2831]
Length = 238
Score = 168 bits (426), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 87/223 (39%), Positives = 135/223 (60%), Gaps = 1/223 (0%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
+ D+++ LF+Q VK ++ L SI WS+I+ K++ F + + FE FWSG+
Sbjct: 12 VADMTLLGLFLQAHFVVKIVMIGLLSASIWCWSIIVDKTLLFRRTKAEMDAFEDAFWSGR 71
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
SLE + +S + GLAA+F++AM EWK+S + R + RI++ +DV I RE+E
Sbjct: 72 SLEELFRSFNDRPATGLAAVFVAAMREWKRSFEGSGRQIQSLSQRIEKQLDVTIHREVER 131
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
+ +L FL S+ SAG +G+ G V G+M F SIA + ++ V PGI E+L + +GL
Sbjct: 132 LESRLLFLASIGSAGPYIGLFGTVWGIMTAFTSIAASKNTSLAVVAPGIAEALFATAIGL 191
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNI 229
+IP+ +AYNK + K ++E FA+EFSAILSRQ + +
Sbjct: 192 FAAIPAVLAYNKLQAEVSKAQSRLESFADEFSAILSRQIDERL 234
>gi|296535989|ref|ZP_06898133.1| TolQ colicin import protein [Roseomonas cervicalis ATCC 49957]
gi|296263675|gb|EFH10156.1| TolQ colicin import protein [Roseomonas cervicalis ATCC 49957]
Length = 238
Score = 167 bits (422), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 88/228 (38%), Positives = 132/228 (57%), Gaps = 3/228 (1%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
+N G D+S++ LF+Q VK ++ L + S+ W+V+ +K + + R FE
Sbjct: 8 SNLGQVAHDLSLWGLFLQADWVVKSVMLGLLLASVWVWAVVFEKVTSLRRVNRAADAFED 67
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSP--IGIQDRIDRMMDV 119
FWSG SLET+ +AA+F +AM EW++S + A G+Q R +R M+V
Sbjct: 68 RFWSGGSLETLYSQEGERPTHPIAAVFGAAMREWERSSARPAEGAALAGMQQRAERAMNV 127
Query: 120 AIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIES 178
AI RE++ + + FL S+ S +G+ G V G+M F +IAG + N+ V PGI E+
Sbjct: 128 AITREMDRLERWMVFLASVGSVAPFIGLFGTVWGIMNSFSAIAGMNNTNLAVVAPGIAEA 187
Query: 179 LISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
L + +GL +IP+ +AYNK D +FA ++EGFA EF AILSRQ E
Sbjct: 188 LFATAIGLVAAIPAVLAYNKINTDLARFAARLEGFAAEFGAILSRQAE 235
>gi|163796371|ref|ZP_02190332.1| Biopolymer transport protein [alpha proteobacterium BAL199]
gi|159178513|gb|EDP63055.1| Biopolymer transport protein [alpha proteobacterium BAL199]
Length = 243
Score = 165 bits (418), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 90/224 (40%), Positives = 137/224 (61%), Gaps = 7/224 (3%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLET 71
+I+ LF+ VK ++ +L I S+ W++I K +LRR+ EFE+ FWSG SLE
Sbjct: 20 NIWDLFLAADPIVKGVMGMLLIASVFCWAIIFDKWFKVRSLRRRAVEFEEAFWSGGSLED 79
Query: 72 VCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSP-----IGIQDRIDRMMDVAIARELE 126
+ + NH +AA+F SAM EW++S +G S ++ RID++M + I+RE+E
Sbjct: 80 LYDRMGNHPEDPMAAVFSSAMREWRRSAARGLTSKGTELRASLRHRIDQVMLLTISREME 139
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLG 185
+ ++++FL S+ S +G+ G V G+M FQSIA + ++ V PGI E+L + LG
Sbjct: 140 ALEKRMTFLASVGSTAPFIGLFGTVWGIMNSFQSIAASKNTSLAVVAPGIAEALFATALG 199
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ-TEGN 228
L +IP+ I YNK D ++A ++EGFA EF +ILSRQ EGN
Sbjct: 200 LVAAIPAVIFYNKISSDLGRYAARLEGFALEFGSILSRQLDEGN 243
>gi|217977107|ref|YP_002361254.1| protein TolQ [Methylocella silvestris BL2]
gi|217502483|gb|ACK49892.1| protein TolQ [Methylocella silvestris BL2]
Length = 248
Score = 163 bits (412), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 84/219 (38%), Positives = 139/219 (63%), Gaps = 2/219 (0%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
++S+ ++F + VK ++ L S+ W++II K + +R +FE++FWSG SL
Sbjct: 21 EVSLLSMFWSAHIVVKLVMLGLLAASVWCWAIIINKVILLRRTQRAIDQFEEVFWSGASL 80
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSP-IGIQDRIDRMMDVAIARELEEI 128
+ + +L G+A++F++AM EW++S A S +G+Q RI++++DV+IARE+E++
Sbjct: 81 DELYTTLSARPTSGMASLFVAAMREWRRSVQGAATSTFMGLQARIEKVLDVSIAREVEKL 140
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
L L +++SA +G+ G V G+M F+SIA + ++ V PGI E+L + +GL
Sbjct: 141 ESNLLVLATVASASPFIGLFGTVWGIMSSFRSIAASRNTSLAVVAPGIAEALFATAIGLF 200
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ IAYNK D K Q+EGFA+EFS+ILSRQ +
Sbjct: 201 AAIPALIAYNKLQGDVAKKQAQLEGFADEFSSILSRQID 239
>gi|182677271|ref|YP_001831417.1| protein TolQ [Beijerinckia indica subsp. indica ATCC 9039]
gi|182633154|gb|ACB93928.1| protein TolQ [Beijerinckia indica subsp. indica ATCC 9039]
Length = 241
Score = 162 bits (411), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 89/232 (38%), Positives = 141/232 (60%), Gaps = 6/232 (2%)
Query: 1 MNNYGLA-----IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQ 55
MN LA + ++S+F++F + VK ++ L SI W++I+ K + F + R
Sbjct: 1 MNPADLASAAAPVTEVSLFSMFWSAHIIVKIVMLGLLGSSIWCWAIIVNKVLLFSKVDRD 60
Query: 56 FREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDR 115
FE +FWSG SL+ + +L G+A++F++ M EWK+S A S +G+Q RI++
Sbjct: 61 MARFEDIFWSGTSLDELYATLSAKPVSGMASLFVAGMREWKRSMQGAAHSFLGLQARIEK 120
Query: 116 MMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPG 174
+DV+IARE+E+ L L +++SAG VG+ G V G+M F+SIA + ++ V PG
Sbjct: 121 ALDVSIAREVEKYESSLLVLATVASAGPFVGLFGTVWGIMTAFRSIAASKNTSLAVVAPG 180
Query: 175 IIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
I E+L + +GL +IP+ IAYNK D + ++E FA+EFS+ILSRQ +
Sbjct: 181 IAEALFATAIGLFAAIPALIAYNKLQNDVARKQAKLESFADEFSSILSRQID 232
>gi|83312313|ref|YP_422577.1| biopolymer transport protein [Magnetospirillum magneticum AMB-1]
gi|82947154|dbj|BAE52018.1| Biopolymer transport protein [Magnetospirillum magneticum AMB-1]
Length = 241
Score = 158 bits (400), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 85/223 (38%), Positives = 133/223 (59%), Gaps = 5/223 (2%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
MD+S++ALF++ + VK ++ L + S W++I K + L + +FE+ FWSG S
Sbjct: 16 MDLSMWALFLRADIIVKFVMIALLMASFWCWAIIFDKLMKVRQLTTRADQFEEAFWSGGS 75
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKG----ARSPIGIQDRIDRMMDVAIARE 124
LE + + + +++IF++AM EW++S KG + + RIDR+M V + RE
Sbjct: 76 LEELYDRIGSRPLDPMSSIFVAAMREWRRSAAKGLADRDSTRASLPQRIDRVMSVTLGRE 135
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISIL 183
+E + +L FL S+ S +G+ G V G+M FQSIA + ++ V PGI E+L +
Sbjct: 136 MELLERRLGFLASVGSTAPFIGLFGTVWGIMNSFQSIAATKNTSLAVVAPGIAEALFATA 195
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
LGL +IP+ IAYNK D +++ ++E FA EF AILSRQ E
Sbjct: 196 LGLVAAIPAVIAYNKISTDLDRYSKRLENFAGEFGAILSRQLE 238
>gi|163738346|ref|ZP_02145761.1| MotA/TolQ/ExbB proton channel [Phaeobacter gallaeciensis BS107]
gi|163742237|ref|ZP_02149625.1| proton transporter TolQ [Phaeobacter gallaeciensis 2.10]
gi|161384567|gb|EDQ08948.1| proton transporter TolQ [Phaeobacter gallaeciensis 2.10]
gi|161388267|gb|EDQ12621.1| MotA/TolQ/ExbB proton channel [Phaeobacter gallaeciensis BS107]
Length = 231
Score = 157 bits (398), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 86/219 (39%), Positives = 127/219 (57%), Gaps = 1/219 (0%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
+D S++ LF + L VK ++ +L + SI SW++I+QK +N+ RR+ EF++ FWSG+
Sbjct: 12 IDFSMWGLFARATLTVKLVMLMLVVASIWSWAIILQKLINYRLARREAAEFDRAFWSGEP 71
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
L+ + + IF + M+EW++S G Q RI+R MDVAIA+E E +
Sbjct: 72 LDGLFDQIGPQPKGQSQRIFAAGMTEWRRSHRTDGALIAGAQARIERSMDVAIAKESEHV 131
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
LS L ++ S VG+ G V G+M F IA + N+ V PGI E+L++ LGL
Sbjct: 132 QSGLSILATVGSTAPFVGLFGTVWGIMTAFIEIAEQQNTNLAVVAPGIAEALMATGLGLL 191
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ I YNK DS + E FA+EFS ILSRQ +
Sbjct: 192 AAIPAVIFYNKLSADSDRIIGSYEAFADEFSTILSRQLD 230
>gi|46201287|ref|ZP_00055338.2| COG0811: Biopolymer transport proteins [Magnetospirillum
magnetotacticum MS-1]
Length = 226
Score = 157 bits (396), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 85/223 (38%), Positives = 131/223 (58%), Gaps = 5/223 (2%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
MD+S++ALF++ + VK ++ L S W++I K + L + +FE+ FWSG S
Sbjct: 1 MDLSMWALFLRADIIVKFVMIALLCASFWCWAIIFDKIMKVRQLTTRADQFEEAFWSGGS 60
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKG----ARSPIGIQDRIDRMMDVAIARE 124
LE + + + +++IF++AM EW++S KG + + RIDR+M V + RE
Sbjct: 61 LEELYDRIGSRPLDPMSSIFVAAMREWRRSAAKGLADRDSTRASLPQRIDRVMSVTLGRE 120
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISIL 183
+E + +L FL S S +G+ G V G+M FQSIA + ++ V PGI E+L +
Sbjct: 121 MELLERRLGFLASTGSTAPFIGLFGTVWGIMNSFQSIAATKNTSLAVVAPGIAEALFATA 180
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
LGL +IP+ IAYNK D +++ ++E FA EF AILSRQ E
Sbjct: 181 LGLVAAIPAVIAYNKISNDLDRYSKRLENFAGEFGAILSRQLE 223
>gi|114327767|ref|YP_744924.1| tolQ protein [Granulibacter bethesdensis CGDNIH1]
gi|114315941|gb|ABI62001.1| tolQ protein [Granulibacter bethesdensis CGDNIH1]
Length = 241
Score = 156 bits (395), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 84/220 (38%), Positives = 125/220 (56%), Gaps = 3/220 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S+ LF+Q VK ++ LL SI W+V I K V+ R FE FWSG SL
Sbjct: 19 DLSLLGLFLQADAIVKIVMLLLLFASIWVWAVAIDKYVSLRRANRAADAFEDRFWSGGSL 78
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGAR--SPIGIQDRIDRMMDVAIARELEE 127
+ + ++ +AA+F +AM EW+++ S G+++R DR M V I RE++
Sbjct: 79 DELYETEGAKPTNPIAAVFGAAMGEWRRTARIAGTDFSRSGVRERTDRAMGVTIGREMDR 138
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
+ + FL S+ S +G+ G V G+M F SIA ++ N+ V PGI E+L + +GL
Sbjct: 139 LERWMVFLASVGSTAPFIGLFGTVWGIMNSFSSIAAMHNTNLSVVAPGIAEALFATAMGL 198
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ + YNK D +FA ++E FA EF AILSRQ+E
Sbjct: 199 VAAIPAVLIYNKLSTDMARFAARLEAFAAEFGAILSRQSE 238
>gi|254463470|ref|ZP_05076886.1| protein TolQ [Rhodobacterales bacterium HTCC2083]
gi|206680059|gb|EDZ44546.1| protein TolQ [Rhodobacteraceae bacterium HTCC2083]
Length = 231
Score = 154 bits (390), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 87/217 (40%), Positives = 131/217 (60%), Gaps = 1/217 (0%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
+D S++ALF++ + VK ++ +L + SI +WS+++QK + + T R + EF+Q FWSG+
Sbjct: 12 IDFSMWALFVRATITVKLVMIMLIVASIWAWSIVVQKYMQYRTARSEQAEFDQAFWSGEP 71
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
L+ + + + N IF + M+EW++S G Q RIDR MDVAI++E EE+
Sbjct: 72 LDQLFEQIGAQPNGASEKIFAAGMTEWRRSHRVDGGLIAGAQSRIDRSMDVAISKEAEEL 131
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
LS L ++ S VG+ G V G+M F IA + N+ V PGI E+L++ LGL
Sbjct: 132 QSGLSVLATVGSTAPFVGLFGTVWGIMNAFIEIAEAQNTNLAVVAPGIAEALLATGLGLL 191
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+IP+ I YNKF DS + E FA+EF+ ILSRQ
Sbjct: 192 AAIPAVIYYNKFSADSDRIVGGYEAFADEFATILSRQ 228
>gi|254475158|ref|ZP_05088544.1| protein TolQ [Ruegeria sp. R11]
gi|214029401|gb|EEB70236.1| protein TolQ [Ruegeria sp. R11]
Length = 231
Score = 154 bits (389), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 84/219 (38%), Positives = 126/219 (57%), Gaps = 1/219 (0%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
+D S++ LF + + VK ++ +L SI SW++I+QK +N+ RR+ EF++ FWSG+
Sbjct: 12 IDFSMWGLFERATVTVKLVMVMLVASSIWSWAIILQKLINYRQARREAAEFDRAFWSGEP 71
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
L+ + + IF + M+EW++S G Q RI+R MDVAIA+E E +
Sbjct: 72 LDGLFDDIGPQPKGQSQRIFAAGMTEWRRSHRTDGALIAGAQARIERSMDVAIAKESESV 131
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
LS L ++ S VG+ G V G+M F IA + N+ V PGI E+L++ LGL
Sbjct: 132 QSGLSILATIGSTAPFVGLFGTVWGIMTAFIEIAEQQNTNLAVVAPGIAEALMATGLGLL 191
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ I YNK DS + E FA+EF+ ILSRQ +
Sbjct: 192 AAIPAVIFYNKLSADSDRIIGSYEAFADEFATILSRQLD 230
>gi|126725526|ref|ZP_01741368.1| Biopolymer transport protein, TolQ [Rhodobacterales bacterium
HTCC2150]
gi|126704730|gb|EBA03821.1| Biopolymer transport protein, TolQ [Rhodobacterales bacterium
HTCC2150]
Length = 231
Score = 154 bits (388), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 89/219 (40%), Positives = 127/219 (57%), Gaps = 1/219 (0%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
+D SI ALF + L VK ++ +L + S SWS+IIQK + + + R Q F++ FWSG+
Sbjct: 12 LDFSILALFWRATLTVKIVMMMLIVASFWSWSIIIQKLIGYRSARSQAARFDESFWSGEP 71
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
L+ + S+ N +F + M EW++S R G Q RIDR MDVAIA+E EE+
Sbjct: 72 LDELFDSIGPTPNSPGEKVFFAGMVEWRRSHRDDGRLIAGAQARIDRSMDVAIAKEAEEM 131
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA-GYYSNNVVSIPGIIESLISILLGLC 187
LSFL S+ S +G+ G V G+ F+ IA +N V PGI E+L++ LGL
Sbjct: 132 NRGLSFLASVGSTAPFIGLFGTVWGIKTAFEQIAIAQNTNLAVVAPGIAEALLATGLGLL 191
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ + YNK DS + E FA+EF+ ILSRQ +
Sbjct: 192 AAIPAVVFYNKLSADSDRILGGYEAFADEFATILSRQLD 230
>gi|258543666|ref|YP_003189099.1| ExbB/TolQ/MotA [Acetobacter pasteurianus IFO 3283-01]
gi|256634744|dbj|BAI00720.1| ExbB/TolQ/MotA [Acetobacter pasteurianus IFO 3283-01]
gi|256637800|dbj|BAI03769.1| ExbB/TolQ/MotA [Acetobacter pasteurianus IFO 3283-03]
gi|256640854|dbj|BAI06816.1| ExbB/TolQ/MotA [Acetobacter pasteurianus IFO 3283-07]
gi|256643909|dbj|BAI09864.1| ExbB/TolQ/MotA [Acetobacter pasteurianus IFO 3283-22]
gi|256646964|dbj|BAI12912.1| ExbB/TolQ/MotA [Acetobacter pasteurianus IFO 3283-26]
gi|256650017|dbj|BAI15958.1| ExbB/TolQ/MotA [Acetobacter pasteurianus IFO 3283-32]
gi|256653007|dbj|BAI18941.1| ExbB/TolQ/MotA [Acetobacter pasteurianus IFO 3283-01-42C]
gi|256656061|dbj|BAI21988.1| ExbB/TolQ/MotA [Acetobacter pasteurianus IFO 3283-12]
Length = 246
Score = 154 bits (388), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 90/235 (38%), Positives = 139/235 (59%), Gaps = 18/235 (7%)
Query: 3 NYGL-AIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFRE--- 58
N G+ A D+S++ALFM L VK ++ L I S++ W++I+ K F+TLRR RE
Sbjct: 16 NLGVSAAGDLSVWALFMHASLVVKIVMLGLLICSVMVWAIILDK---FVTLRRINREATG 72
Query: 59 FEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSP------IGIQDR 112
FE FWSG SL+ + +S ++A+F +AM EW++S AR P G+++R
Sbjct: 73 FEDRFWSGGSLDDLYESDGAKPTNPMSAVFGAAMGEWRRS----ARIPGVDLVRGGVKER 128
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VS 171
+DR + + I RE++ + + FL +++ VG+ G V G+M F SIA ++ N+ V
Sbjct: 129 VDRAIGITITREMDRLRRWVIFLATVAPVAPFVGLFGTVWGIMHSFSSIAAEHNTNLSVV 188
Query: 172 IPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
PGI E+L + +GL +IP+ +AYN F ++EGF EF+AILSRQ+E
Sbjct: 189 APGISEALFATAIGLLTAIPAYVAYNVISNSMDLFQDRLEGFGTEFAAILSRQSE 243
>gi|329113833|ref|ZP_08242604.1| Protein TolQ [Acetobacter pomorum DM001]
gi|326696843|gb|EGE48513.1| Protein TolQ [Acetobacter pomorum DM001]
Length = 246
Score = 153 bits (387), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 90/235 (38%), Positives = 139/235 (59%), Gaps = 18/235 (7%)
Query: 3 NYGL-AIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFRE--- 58
N G+ A D+S++ALFM L VK ++ L I S++ W++I+ K F+TLRR RE
Sbjct: 16 NLGVNAAGDLSVWALFMHASLVVKIVMLGLLICSVMVWAIILDK---FVTLRRINREATG 72
Query: 59 FEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSP------IGIQDR 112
FE FWSG SL+ + +S ++A+F +AM EW++S AR P G+++R
Sbjct: 73 FEDRFWSGGSLDDLYESDGAKPTNPMSAVFGAAMGEWRRS----ARIPGVDLVRGGVKER 128
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VS 171
+DR + + I RE++ + + FL +++ VG+ G V G+M F SIA ++ N+ V
Sbjct: 129 VDRAIGITITREMDRLRRWVIFLATVAPVAPFVGLFGTVWGIMHSFSSIAAEHNTNLSVV 188
Query: 172 IPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
PGI E+L + +GL +IP+ +AYN F ++EGF EF+AILSRQ+E
Sbjct: 189 APGISEALFATAIGLLTAIPAYVAYNVISNSMDLFQDRLEGFGTEFAAILSRQSE 243
>gi|288957822|ref|YP_003448163.1| biopolymer transport protein [Azospirillum sp. B510]
gi|288910130|dbj|BAI71619.1| biopolymer transport protein [Azospirillum sp. B510]
Length = 244
Score = 153 bits (386), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 82/228 (35%), Positives = 129/228 (56%), Gaps = 3/228 (1%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N +I+I LF Q VK ++ +L I SI W++II+K + L Q FE+
Sbjct: 12 NAAATTAHEITILGLFWQADAIVKIVMMMLVIASIWCWAIIIEKLMRLRRLNAQADAFEE 71
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPI--GIQDRIDRMMDV 119
FWSG SL+ + + + +AA F + M EW+ + D+G + +Q R++R+M V
Sbjct: 72 AFWSGGSLDALYDRIGQSPSDPMAATFAAGMREWRHAADRGIGGTMKSSLQQRVERVMAV 131
Query: 120 AIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIES 178
I RE+ ++FL S+ S +G+ G V G+M F SIAG + ++ V PGI E+
Sbjct: 132 TIGREMARAERYMTFLASVGSTAPFIGLFGTVWGIMNSFTSIAGSGNTSLAVVAPGIAEA 191
Query: 179 LISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
L + +GL +IP+ ++YNKF D ++A +++ F+ EFSAILSR E
Sbjct: 192 LFATAMGLLAAIPAVLSYNKFSTDLGRYADRLDTFSGEFSAILSRHLE 239
>gi|254465478|ref|ZP_05078889.1| protein TolQ [Rhodobacterales bacterium Y4I]
gi|206686386|gb|EDZ46868.1| protein TolQ [Rhodobacterales bacterium Y4I]
Length = 231
Score = 152 bits (385), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 85/219 (38%), Positives = 125/219 (57%), Gaps = 1/219 (0%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
+D S++ LF + + VK ++ +L SI SW +IIQK +N+ R++ F++ FWSG
Sbjct: 12 IDFSMWGLFARATVTVKLVMLMLVGASIWSWGIIIQKMINYRKARQEADAFDRAFWSGNP 71
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
L+T+ + A IF + M+EW++S G Q RIDR MDVAIA+E E +
Sbjct: 72 LDTLFDQIGAEPPGQAARIFSAGMTEWRRSHRSDGGLIPGAQARIDRSMDVAIAKETEGL 131
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
LS L ++ S VG+ G V G+M F IA + N+ V PGI E+L++ LGL
Sbjct: 132 QSGLSVLATVGSTAPFVGLFGTVWGIMTAFIEIAEQQNTNLAVVAPGIAEALMATGLGLL 191
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ + YNK DS + E FA+EF+ ILSRQ +
Sbjct: 192 AAIPAVVFYNKLSADSDRIIGGYEAFADEFATILSRQLD 230
>gi|294678715|ref|YP_003579330.1| TolQ protein [Rhodobacter capsulatus SB 1003]
gi|294477535|gb|ADE86923.1| TolQ protein [Rhodobacter capsulatus SB 1003]
Length = 234
Score = 151 bits (382), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 83/220 (37%), Positives = 125/220 (56%), Gaps = 1/220 (0%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
MD S+ ALF++ L VK ++ LL + S SWS++I+K ++F R + F++ FWSG+
Sbjct: 15 MDFSLLALFVRASLTVKLVMILLTLASFWSWSIMIRKYISFRAARAEADAFDRAFWSGEP 74
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
L+ + + + IF + M EW++S G Q RI+R MDVAIA+E E +
Sbjct: 75 LDELFDQIGPAPDGASQRIFAAGMLEWRRSHRHDGELITGAQARIERSMDVAIAKEGEAL 134
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA-GYYSNNVVSIPGIIESLISILLGLC 187
LSFL ++ S VG+ G V G+ F+ IA ++ V PGI E+L++ +GL
Sbjct: 135 NSGLSFLATVGSTAPFVGLFGTVWGIKVAFEEIAISQNTSLAVVAPGISEALVATAIGLV 194
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEG 227
+IP+ IAYNK D+ + E FA+EFS I SRQ +
Sbjct: 195 AAIPAVIAYNKLSSDADEITSGYEAFADEFSTIPSRQLDA 234
>gi|58040116|ref|YP_192080.1| MotA/TolQ/ExbB proton channel family protein [Gluconobacter oxydans
621H]
gi|58002530|gb|AAW61424.1| MotA/TolQ/ExbB proton channel family protein [Gluconobacter oxydans
621H]
Length = 247
Score = 150 bits (380), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 83/219 (37%), Positives = 128/219 (58%), Gaps = 3/219 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+S LF+ + VK ++ L + S W++I +K + + R+ EFE FWSG SL+
Sbjct: 18 LSPLDLFLHASIVVKLVMLGLLLCSAGVWAIIAEKIILIRRVNREATEFEDRFWSGGSLD 77
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGA--RSPIGIQDRIDRMMDVAIARELEEI 128
+ +S +AA+F +AM EW++S G S G+++R+DR +D+ I RE + +
Sbjct: 78 DLYESDGARPTHPMAAVFGAAMGEWRRSARIGGIDLSRGGVRERVDRAIDITIMRENDRL 137
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
T +L FL ++ VG+ G V G+M F SIA ++ N+ V PGI E+L + +GL
Sbjct: 138 TRRLIFLATIGPVAPFVGLFGTVWGIMHSFASIAQMHNTNLSVVAPGISEALFATAIGLV 197
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ IAYN +KFA +ME F EF+AILSRQ+E
Sbjct: 198 TAIPAYIAYNGLSNSFEKFADRMEAFGTEFAAILSRQSE 236
>gi|83943915|ref|ZP_00956372.1| proton transporter TolQ [Sulfitobacter sp. EE-36]
gi|83954488|ref|ZP_00963199.1| proton transporter TolQ [Sulfitobacter sp. NAS-14.1]
gi|83840772|gb|EAP79943.1| proton transporter TolQ [Sulfitobacter sp. NAS-14.1]
gi|83845162|gb|EAP83042.1| proton transporter TolQ [Sulfitobacter sp. EE-36]
Length = 231
Score = 150 bits (380), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 78/219 (35%), Positives = 125/219 (57%), Gaps = 1/219 (0%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
+D S+ LF++ + VK ++ +L + S SWS+IIQK + + + + F+Q FWSG+
Sbjct: 12 IDFSLLGLFLRATITVKLVMIMLIVASFWSWSIIIQKMIQYRHAKAEAERFDQAFWSGEP 71
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
L+ + ++ + IF + M+EW++S + G RIDR MDVAIA+E E +
Sbjct: 72 LDGLYDTIGPDPDGAAEKIFAAGMTEWRRSHREDGGLIPGATARIDRSMDVAIAKEAERL 131
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLC 187
+ L L + S +G+ G V G+M F IA + ++V + PGI E+L++ +GL
Sbjct: 132 QKGLPVLATTGSTAPFIGLFGTVFGIMNSFIEIAAQQNTSLVVVAPGIAEALLATGIGLL 191
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ I YNK DS + E FA+EF+ ILSRQ +
Sbjct: 192 AAIPAVIFYNKLSADSDRILGGYEAFADEFATILSRQLD 230
>gi|163745822|ref|ZP_02153181.1| MotA/TolQ/ExbB proton channel [Oceanibulbus indolifex HEL-45]
gi|161380567|gb|EDQ04977.1| MotA/TolQ/ExbB proton channel [Oceanibulbus indolifex HEL-45]
Length = 231
Score = 150 bits (380), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 81/220 (36%), Positives = 129/220 (58%), Gaps = 3/220 (1%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
+D S++ LF + + VK ++ +L S SWS+I+QK++ + R + +F+Q FWSG+
Sbjct: 12 IDFSLWGLFAKATVTVKLVMIMLIGASFWSWSIIVQKTIQYRKARAEAAQFDQAFWSGEP 71
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSC-DKGARSPIGIQDRIDRMMDVAIARELEE 127
L+ + ++ + IF + MSEW++S + GA P G RIDR MDVAI++E E
Sbjct: 72 LDGLFDNIGADPDGSSEKIFAAGMSEWRRSHREDGALIP-GATARIDRSMDVAISKEAER 130
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
+ + L L ++ S VG+ G V G+M F IA + N+ V PGI E+L++ +GL
Sbjct: 131 LQKGLPVLATVGSTAPFVGLFGTVFGIMNSFIEIAAQQNTNLAVVAPGIAEALLATGIGL 190
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ + YNK DS + E F++EF+ ILSRQ +
Sbjct: 191 LAAIPAVVFYNKLSADSDRILGNYEAFSDEFATILSRQLD 230
>gi|119383435|ref|YP_914491.1| MotA/TolQ/ExbB proton channel [Paracoccus denitrificans PD1222]
gi|119373202|gb|ABL68795.1| Cell division and transport-associated protein TolQ [Paracoccus
denitrificans PD1222]
Length = 231
Score = 150 bits (380), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 79/219 (36%), Positives = 124/219 (56%), Gaps = 1/219 (0%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
+D S+ ALF + L V+ ++ +L + S +W++IIQK ++F RR+ F++ FWSGQ
Sbjct: 11 VDFSLIALFARASLTVQIVMVILILASFWAWAIIIQKFISFNAARREADRFDRAFWSGQP 70
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
L+ + + + IF + M+EW++S G+ RIDR M+V I RE + +
Sbjct: 71 LDDLYDRIGETPSGPAERIFSAGMAEWRRSHRDDGNLIAGVTARIDRAMNVTINRENDRL 130
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA-GYYSNNVVSIPGIIESLISILLGLC 187
T L FL ++ S +G+ G V G+ F+ IA ++ V PGI E+L++ LGL
Sbjct: 131 TRGLPFLATVGSTAPFIGLFGTVWGIKTAFEEIAISQNTSLAVVAPGIAEALVATALGLL 190
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ I YNK D+ + E FA+EFS ILSRQ +
Sbjct: 191 AAIPAVIFYNKLSSDADRITGGYETFADEFSTILSRQLD 229
>gi|260429238|ref|ZP_05783215.1| protein TolQ [Citreicella sp. SE45]
gi|260419861|gb|EEX13114.1| protein TolQ [Citreicella sp. SE45]
Length = 231
Score = 149 bits (377), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 82/230 (35%), Positives = 128/230 (55%), Gaps = 4/230 (1%)
Query: 1 MNNYGLAI---MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFR 57
M+ LA+ +D S++ LF + L VK ++ +L + S+ W++I +K V++ RR+
Sbjct: 1 MDPQTLAVAQEIDFSMWGLFARATLTVKLVMLMLVLSSVWGWAIIFEKIVSYRHARREAA 60
Query: 58 EFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMM 117
F++ FWSG+ L+ + + +F + M+EW++S G RIDR M
Sbjct: 61 RFDRAFWSGEPLDELYDQIGADPKGRAQRVFAAGMTEWRRSHRDDGGLIAGAHARIDRSM 120
Query: 118 DVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGII 176
DVAI +E EE+ L L +++SA VG+ G V G+M F IA ++V + PGI
Sbjct: 121 DVAIQKESEELQRGLPVLATVASAAPFVGLFGTVWGIMHAFIEIANQQDTSLVVVAPGIA 180
Query: 177 ESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
E+L + LGL +IP+ I YNK D+ + E FA+EFS ILSRQ +
Sbjct: 181 EALFATALGLVAAIPAVIFYNKLSADANRVIAGYEAFADEFSTILSRQLD 230
>gi|114765734|ref|ZP_01444832.1| proton transporter TolQ [Pelagibaca bermudensis HTCC2601]
gi|114541951|gb|EAU44986.1| proton transporter TolQ [Roseovarius sp. HTCC2601]
Length = 231
Score = 148 bits (374), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 77/220 (35%), Positives = 123/220 (55%), Gaps = 1/220 (0%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
+D S++ LF + L VK ++ +L + S+ W++I++K V++ RR+ +F++ FWSG+
Sbjct: 12 IDFSMWGLFARATLTVKLVMLMLVLASVWGWAIIVEKIVSYRAARREAAKFDRAFWSGEP 71
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
L+ + + +F + M+EW++S G RIDR MDVAI +E E++
Sbjct: 72 LDELYDQIGPEPKGRAQRVFAAGMTEWRRSHRDDGGLIAGAHARIDRSMDVAIQKESEDL 131
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLC 187
L L ++ S VG+ G V G+M F IA ++V + PGI E+L + LGL
Sbjct: 132 QRGLPVLATVGSTAPFVGLFGTVWGIMHAFIEIAAQQDTSLVVVAPGIAEALFATALGLV 191
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEG 227
+IP+ I YNK D+ + E FA+EFS ILSRQ +
Sbjct: 192 AAIPAVIFYNKLSADADRIISGYEAFADEFSTILSRQLDA 231
>gi|126737224|ref|ZP_01752959.1| proton transporter TolQ [Roseobacter sp. SK209-2-6]
gi|126721809|gb|EBA18512.1| proton transporter TolQ [Roseobacter sp. SK209-2-6]
Length = 231
Score = 148 bits (373), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 87/219 (39%), Positives = 127/219 (57%), Gaps = 1/219 (0%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
+D S++ LF + L VK ++ +L + SI SW +I QK +N+ R + EF+Q FWSG+
Sbjct: 12 IDFSMWGLFARATLTVKLVMLMLIVASIWSWGIIFQKLINYRLARSEAAEFDQAFWSGEP 71
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
L+ + L + A IF + M+EW++S G Q RIDR MDVAIA+E E++
Sbjct: 72 LDGLFDHLGPEPSGRAARIFAAGMAEWRRSHRSDGGLIPGAQARIDRSMDVAIAKETEDL 131
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
LS L ++ S +G+ G V G+M F IA + N+ V PGI E+L++ LGL
Sbjct: 132 QSGLSILATVGSTAPFIGLFGTVWGIMNAFIEIAEQQNTNLAVVAPGIAEALLATGLGLL 191
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ I YNK DS + E FA+EF+ ILSRQ +
Sbjct: 192 AAIPAVIFYNKLSADSDRILGGYEAFADEFATILSRQLD 230
>gi|254487877|ref|ZP_05101082.1| protein TolQ [Roseobacter sp. GAI101]
gi|214044746|gb|EEB85384.1| protein TolQ [Roseobacter sp. GAI101]
Length = 231
Score = 147 bits (371), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 79/219 (36%), Positives = 123/219 (56%), Gaps = 1/219 (0%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
+D S+ LF++ VK ++ L + S SWS+I+QK + + + + F+Q FWSG+
Sbjct: 12 IDFSLLGLFLRATFTVKLVMISLIVASFWSWSIIVQKILQYRRAKAEAERFDQAFWSGEP 71
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
L+ + S+ IF + M+EW++S + G RIDR MDVAIA+E E++
Sbjct: 72 LDGLYDSIGPDPEGAADKIFAAGMTEWRRSHREDGGLIPGATARIDRSMDVAIAKESEKL 131
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLC 187
+ L L + S VG+ G V G+M F IA + ++V + PGI E+L++ +GL
Sbjct: 132 QKGLPVLATTGSTAPFVGLFGTVFGIMHSFIEIAAQQNTSLVVVAPGIAEALLATGIGLL 191
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ I YNK DS + E FA+EF+ ILSRQ +
Sbjct: 192 AAIPAVIFYNKLSADSDRILGGYEAFADEFATILSRQLD 230
>gi|148261884|ref|YP_001236011.1| MotA/TolQ/ExbB proton channel [Acidiphilium cryptum JF-5]
gi|326405388|ref|YP_004285470.1| protein TolQ [Acidiphilium multivorum AIU301]
gi|146403565|gb|ABQ32092.1| Cell division and transport-associated protein TolQ [Acidiphilium
cryptum JF-5]
gi|325052250|dbj|BAJ82588.1| protein TolQ [Acidiphilium multivorum AIU301]
Length = 238
Score = 147 bits (370), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 84/231 (36%), Positives = 131/231 (56%), Gaps = 5/231 (2%)
Query: 1 MNNYGLAI--MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFRE 58
+N GLA ++S+ +F+ G V+ +I LL S+ W++II+KS++ + R+
Sbjct: 5 VNTAGLAAPGTNLSLLGMFLHAGFVVQVVIVLLLAASVWVWAIIIEKSLSIRRVNREANA 64
Query: 59 FEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPI--GIQDRIDRM 116
FE FWSG+SL+ + +AA+F +AM EW++S + + +RIDR
Sbjct: 65 FEDKFWSGRSLDELYDQEGAEPGHPMAAVFGAAMGEWRRSSRIAGADVVRSSVAERIDRA 124
Query: 117 MDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGI 175
M V RE+E + + FL S+ + VG+ G V G+M F +IA ++ N+ V PGI
Sbjct: 125 MGVTTMREMERLERYMVFLASIGAVAPFVGLFGTVWGIMHSFSAIAAMHNTNLAVVAPGI 184
Query: 176 IESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
E+L + +GL +IP+ +AYNK D + A ++E F EFSAILSRQ E
Sbjct: 185 AEALFATAIGLVAAIPAVLAYNKLSTDLARLAARLEAFGAEFSAILSRQAE 235
>gi|86139149|ref|ZP_01057719.1| proton transporter TolQ [Roseobacter sp. MED193]
gi|85823993|gb|EAQ44198.1| proton transporter TolQ [Roseobacter sp. MED193]
Length = 231
Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 87/219 (39%), Positives = 125/219 (57%), Gaps = 1/219 (0%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
+D S++ LF + VK ++ +L SI SW +IIQK +N+ RR+ +F+Q FWSG+
Sbjct: 12 IDFSMWGLFARATFTVKLVMLMLTAASIWSWGIIIQKLINYRQARRRAAQFDQAFWSGEP 71
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
L+ + L IF + M+EW++S G Q RIDR MDVAIA+E E++
Sbjct: 72 LDGLFDQLGPEPTGHSERIFAAGMAEWRRSHRSDGGLIPGAQARIDRSMDVAIAKETEDL 131
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
LS L ++ S VG+ G V G+M F IA S N+ V PGI E+L++ LGL
Sbjct: 132 QRGLSVLATVGSTAPFVGLFGTVWGIMTAFIEIAEQQSTNLAVVAPGIAEALLATGLGLL 191
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ + YNK DS + E FA+EF+ ILSRQ +
Sbjct: 192 AAIPAVVFYNKLSADSDRILGGYEAFADEFATILSRQLD 230
>gi|254441621|ref|ZP_05055114.1| protein TolQ [Octadecabacter antarcticus 307]
gi|198251699|gb|EDY76014.1| protein TolQ [Octadecabacter antarcticus 307]
Length = 224
Score = 146 bits (369), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 79/221 (35%), Positives = 124/221 (56%), Gaps = 1/221 (0%)
Query: 7 AIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG 66
A D +++ +F + V+ ++ LL I S+ W+VI+ K V + R + R F++ FWSG
Sbjct: 3 AATDFTMWGMFAHATIPVQFVMILLIIASVWCWAVIVDKWVQYRKARAEARIFDEAFWSG 62
Query: 67 QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
L+ + + IF + M EW++S + G RIDR MDVAIA+E E
Sbjct: 63 NPLDELFDRIGATPKGSSEKIFAAGMLEWRRSHRQDGGLIAGATARIDRSMDVAIAKETE 122
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLG 185
+ L+ L ++ S+ +G+LG V+G+M F IA + N+ V PGI E+L++ LG
Sbjct: 123 RLQRGLTVLATVGSSAPFIGLLGTVMGIMNAFIEIAEQQNTNLAVVAPGIAEALLATGLG 182
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
L +IP+ I YNK+ D+ + E FA+EF+ ILSRQ +
Sbjct: 183 LMAAIPAVIYYNKYSADADRVVRGYEAFADEFATILSRQLD 223
>gi|260576648|ref|ZP_05844635.1| protein TolQ [Rhodobacter sp. SW2]
gi|259021133|gb|EEW24442.1| protein TolQ [Rhodobacter sp. SW2]
Length = 231
Score = 146 bits (369), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 82/231 (35%), Positives = 130/231 (56%), Gaps = 4/231 (1%)
Query: 1 MNNYGLAI---MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFR 57
M+ LA+ +D S+ ALF++ VK ++ +L S SW++II+K +++ + +
Sbjct: 1 MDTTPLAMAQEIDFSLLALFLKATFTVKIVMIMLLSMSFWSWAIIIRKHIDYRKAKAEAG 60
Query: 58 EFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMM 117
F++ FWSG+ L+ + + + IF S M EW++S + G Q RIDR M
Sbjct: 61 VFDRAFWSGEPLDELFEKIGAQPMGASERIFSSGMLEWRRSHRQDGGLIAGAQARIDRSM 120
Query: 118 DVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA-GYYSNNVVSIPGII 176
DVAIA+E E + + LSFL ++ S +G+ G V G+ F+ IA +N V PGI
Sbjct: 121 DVAIAKESESLNKGLSFLATVGSTAPFIGLFGTVWGIKHAFEQIAISQNTNLAVVAPGIA 180
Query: 177 ESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEG 227
E+L++ +GL +IP+ + YNK DS+ E FA+EF+ ILSRQ +
Sbjct: 181 EALLATAIGLVAAIPAVVFYNKLNSDSEHIIGGYEAFADEFATILSRQLDA 231
>gi|294085863|ref|YP_003552623.1| Biopolymer transport protein [Candidatus Puniceispirillum marinum
IMCC1322]
gi|292665438|gb|ADE40539.1| Biopolymer transport protein [Candidatus Puniceispirillum marinum
IMCC1322]
Length = 241
Score = 144 bits (364), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 85/240 (35%), Positives = 136/240 (56%), Gaps = 12/240 (5%)
Query: 1 MNNYGLAIM----DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQF 56
MN+ L + D+S + LF+ VK ++ LL + SI W++II+K + RR
Sbjct: 1 MNSADLTVTSSASDLSTWGLFLAADPLVKFVMLLLVLASIWCWAIIIEKISSVRRERRFA 60
Query: 57 REFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKG----ARSPI--GIQ 110
++FE FW+G SL+ + ++ +F++AM EW+++ +G RS + +
Sbjct: 61 QQFEDAFWAGGSLDQLYDDTGPDAEGSMSKVFVAAMREWRRASARGLASSTRSDLRASLV 120
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV- 169
RI+R M+ I RE+E + ++FL S+ S VG+ G V G+M FQSIA + ++
Sbjct: 121 SRIERSMNFTITREMERLERGMNFLASIGSVSPFVGLFGTVWGIMSSFQSIAESKNTSLA 180
Query: 170 VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ-TEGN 228
V PGI E+L + LGL +IP+ AYNKF D ++ + ++E FA EFS +L RQ EG+
Sbjct: 181 VVAPGIAEALFATALGLAAAIPAVTAYNKFAGDLERHSARLETFAQEFSTLLGRQLDEGD 240
>gi|146276611|ref|YP_001166770.1| MotA/TolQ/ExbB proton channel [Rhodobacter sphaeroides ATCC 17025]
gi|145554852|gb|ABP69465.1| MotA/TolQ/ExbB proton channel [Rhodobacter sphaeroides ATCC 17025]
Length = 232
Score = 144 bits (364), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 80/220 (36%), Positives = 121/220 (55%), Gaps = 1/220 (0%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
+D S+ ALF + L VK ++ LL + S SW++II+K + + RR+ F++ FWSG+
Sbjct: 12 IDFSMLALFARATLTVKVVMILLIVMSFWSWAIIIRKHLLYRQARREAAIFDRAFWSGEP 71
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
L+ + + L IF + M EW++S G Q RIDR M VAI +E E +
Sbjct: 72 LDELFERLGPQPEGASEKIFAAGMLEWRRSHRTDGGLIAGAQSRIDRSMGVAIDKESETL 131
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA-GYYSNNVVSIPGIIESLISILLGLC 187
LSFL + S +G+ G V G+ F+ IA +N V PGI E+L++ GL
Sbjct: 132 NAGLSFLATTGSTAPFIGLFGTVWGIKHAFEQIAISQNTNLAVVAPGIAEALLATAFGLV 191
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEG 227
+IP+ + YNK DS++ E F++EF+ ILSRQ +
Sbjct: 192 AAIPAVVFYNKLNADSERIIGGYEAFSDEFATILSRQLDA 231
>gi|83592427|ref|YP_426179.1| MotA/TolQ/ExbB proton channel [Rhodospirillum rubrum ATCC 11170]
gi|83575341|gb|ABC21892.1| MotA/TolQ/ExbB proton channel [Rhodospirillum rubrum ATCC 11170]
Length = 308
Score = 144 bits (364), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 77/222 (34%), Positives = 126/222 (56%), Gaps = 8/222 (3%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+S +++F Q + VK ++ L SI SW+++ +K V L ++ +FE+ FWSG SLE
Sbjct: 86 LSAWSMFWQADIIVKMVMLSLVGASIWSWTIVFEKIVRLRDLNKKAEQFEEKFWSGGSLE 145
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDK-----GARSPIGIQDRIDRMMDVAIAREL 125
+ + + A+F++AM EW+ S + GAR+ + R++R+M + REL
Sbjct: 146 DLFDRIGQRPRDPMTAVFVAAMREWRHSAQRRNGAAGARAMLA--QRVERVMGITQNREL 203
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILL 184
E + +L FL S + VG+ G V G+M F +I ++ ++ PGI E+L + L
Sbjct: 204 ETLERRLGFLASTGAVAPFVGLFGTVWGIMNSFHAIGMSNDTSLATVAPGIAEALFATAL 263
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
GL +IP+ IAYNK D ++A ++E F+ EF AIL RQ +
Sbjct: 264 GLVAAIPAVIAYNKLSADIDRYAGRLEAFSGEFGAILGRQLD 305
>gi|296117352|ref|ZP_06835942.1| protein TolQ [Gluconacetobacter hansenii ATCC 23769]
gi|295976118|gb|EFG82906.1| protein TolQ [Gluconacetobacter hansenii ATCC 23769]
Length = 254
Score = 144 bits (363), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 77/218 (35%), Positives = 127/218 (58%), Gaps = 3/218 (1%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLET 71
S+++LF+Q + VK ++ L + S++ W++I K V + RQ +FE+ FW+G SLE
Sbjct: 34 SLWSLFLQAAIVVKLVMMGLVVSSVIVWAIIFDKIVTIRRVNRQASDFEERFWAGGSLED 93
Query: 72 VCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPI--GIQDRIDRMMDVAIARELEEIT 129
+ +S +AA+F +AM EW++S + G+QDR++R M + I RE++ +
Sbjct: 94 LYESDGAKPIHPMAAVFGAAMGEWRRSSRITGIDLVHGGVQDRVNRAMSITITREMDRLN 153
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCV 188
L F+ ++ +G+ G V G+M F SIA ++ N+ V PGI E+L + +GL
Sbjct: 154 RWLIFVATIGPVAPFIGLFGTVWGIMHAFGSIAAMHNTNLSVVAPGISEALFATAIGLVT 213
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ IAYN F +++ F EF+AILSRQ+E
Sbjct: 214 AIPAVIAYNVIGNSLGVFEDRLDAFGTEFAAILSRQSE 251
>gi|254452911|ref|ZP_05066348.1| protein TolQ [Octadecabacter antarcticus 238]
gi|198267317|gb|EDY91587.1| protein TolQ [Octadecabacter antarcticus 238]
Length = 216
Score = 144 bits (362), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 78/215 (36%), Positives = 121/215 (56%), Gaps = 1/215 (0%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
++ +F + V+ ++ LL I S+ W+VI+ K V + R + R F++ FWSG L+ +
Sbjct: 1 MWGMFAHATIPVQFVMILLIIASVWCWAVIVDKWVQYRKARAEARVFDEAFWSGNPLDEL 60
Query: 73 CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKL 132
+ IF + M EW++S + G RIDR MDVAIA+E E + L
Sbjct: 61 FDRIGATPKGPSEKIFAAGMLEWRRSHRQDGGLIAGATARIDRSMDVAIAKETERLQRGL 120
Query: 133 SFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIP 191
+ L ++ S+ +G+LG V+G+M F IA + N+ V PGI E+L++ LGL +IP
Sbjct: 121 TVLATVGSSAPFIGLLGTVMGIMNAFIEIAEQQNTNLAVVAPGIAEALLATGLGLMAAIP 180
Query: 192 SSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+ I YNKF D+ + E FA+EF+ ILSRQ +
Sbjct: 181 AVIYYNKFSADADRVVSGYEAFADEFATILSRQLD 215
>gi|162146625|ref|YP_001601084.1| protein TolQ [Gluconacetobacter diazotrophicus PAl 5]
gi|209543383|ref|YP_002275612.1| protein TolQ [Gluconacetobacter diazotrophicus PAl 5]
gi|161785200|emb|CAP54746.1| putative protein tolQ [Gluconacetobacter diazotrophicus PAl 5]
gi|209531060|gb|ACI50997.1| protein TolQ [Gluconacetobacter diazotrophicus PAl 5]
Length = 238
Score = 143 bits (361), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 82/229 (35%), Positives = 127/229 (55%), Gaps = 7/229 (3%)
Query: 3 NYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQL 62
N G A +S+++LF+ + VK ++ L S++ W +I K V + RQ FE
Sbjct: 9 NLGAAASGLSLWSLFLHAAIVVKLVMIGLVFSSVVVWGIIFDKIVTLRRVNRQAGVFEDK 68
Query: 63 FWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKG----ARSPIGIQDRIDRMMD 118
FWSG SL+ + ++ LAA+F +AM EW++S AR G+Q+R+DR M+
Sbjct: 69 FWSGGSLDDLYETDGAKPVHPLAAVFGAAMGEWRRSSRISGVDLARG--GVQERVDRAMN 126
Query: 119 VAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIE 177
+ I RE+E + + FL ++ +G+ G V G+M F +IA ++ N+ V PGI E
Sbjct: 127 ITITREMERLGRWMIFLATIGPVAPFIGLFGTVWGIMHAFGAIAAMHNTNLAVVAPGISE 186
Query: 178 SLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+L + +GL +IP+ IAYN F +M F EF+AILSRQ+E
Sbjct: 187 ALFATAIGLVTAIPAVIAYNVINNSLSLFEDRMAAFGTEFAAILSRQSE 235
>gi|110679373|ref|YP_682380.1| putative proton transporter TolQ [Roseobacter denitrificans OCh
114]
gi|109455489|gb|ABG31694.1| putative proton transporter TolQ [Roseobacter denitrificans OCh
114]
Length = 231
Score = 143 bits (361), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 79/219 (36%), Positives = 124/219 (56%), Gaps = 1/219 (0%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
+D S F LF + L VK ++ +L + S +WSVI+ K + + R + F++ FWSG+
Sbjct: 12 IDFSFFGLFARATLIVKIVMIMLIVASFWAWSVIVIKLILYRKTRHEAAVFDRAFWSGEP 71
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
L+ + + + + G IF + M EW++S G RIDR MDVAI +E E +
Sbjct: 72 LDGLFEEVGPAPSGGTEKIFAAGMMEWQRSHHDDGGLIAGATQRIDRSMDVAINKEAEHL 131
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
+ L+ L ++ S+ +G+ G V+G+M F IA + N+ V PGI E+L++ LGL
Sbjct: 132 RDGLTVLATIGSSTPFIGLFGTVIGIMNAFIEIAEQQNTNLAVVAPGIAEALLATGLGLF 191
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ I YNK D+ + E FA+EF+ ILSRQ +
Sbjct: 192 AAIPAVIYYNKLSADADRILAGYESFADEFATILSRQLD 230
>gi|84501649|ref|ZP_00999821.1| proton transporter TolQ [Oceanicola batsensis HTCC2597]
gi|84390270|gb|EAQ02829.1| proton transporter TolQ [Oceanicola batsensis HTCC2597]
Length = 231
Score = 143 bits (360), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 88/231 (38%), Positives = 131/231 (56%), Gaps = 4/231 (1%)
Query: 1 MNNYGLAI---MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFR 57
M LAI +D S++ALF + L VK ++ LL S SWS+IIQK + + + R +
Sbjct: 1 METETLAIAQHVDFSMWALFARATLTVKLVMLLLIAASFWSWSIIIQKIITYRSARSEAT 60
Query: 58 EFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMM 117
+F++ FWSG+ L+ + + + +F + M+EW++S + + G Q RIDR M
Sbjct: 61 KFDRSFWSGEPLDEFYEQIGPDPSGRAHRVFAAGMTEWRRSHREDGQMIAGAQARIDRSM 120
Query: 118 DVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGII 176
DVAIA+E E + L L ++ S VG+ G V G+M F IA + N+ V PGI
Sbjct: 121 DVAIAKEAEGLQAGLPVLATVGSTAPFVGLFGTVWGIMHAFIGIAESQNTNLAVVAPGIA 180
Query: 177 ESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEG 227
E+L++ LGL +IP+ I YNK D+ + E FA+EFS ILSRQ +
Sbjct: 181 EALLATGLGLLAAIPAVIFYNKLSTDADRLVGNYEAFADEFSTILSRQLDA 231
>gi|84687708|ref|ZP_01015581.1| proton transporter TolQ [Maritimibacter alkaliphilus HTCC2654]
gi|84664291|gb|EAQ10782.1| proton transporter TolQ [Rhodobacterales bacterium HTCC2654]
Length = 231
Score = 143 bits (360), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 85/219 (38%), Positives = 123/219 (56%), Gaps = 1/219 (0%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
MD S +ALF + L VK ++ LL S SW++I+ K + F + + F+Q FWSG+
Sbjct: 12 MDFSFWALFFRATLIVKLVMVLLVAMSFYSWAIIVTKFMQFRRAKAEAAMFDQAFWSGEP 71
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
L+ + + + +F + M EW++S G Q RIDR MDVAIA+E E +
Sbjct: 72 LDELYEQIGPSPTGSSEKVFAAGMLEWRRSHRADGGLIAGAQSRIDRSMDVAIAKEAEGL 131
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
+L FL + +S+ +G+ G V G+M F IA + N+ V PGI E+L++ LGL
Sbjct: 132 NARLGFLATTASSAPFIGLFGTVWGIMHAFTEIAQQQNTNLAVVAPGIAEALLATGLGLL 191
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ I YNK DS A E FA+EFS ILSRQ +
Sbjct: 192 AAIPALIFYNKLTADSDNVAAGWESFADEFSTILSRQLD 230
>gi|304320245|ref|YP_003853888.1| TolQ protein, inner membrane protein, tolerance to group A colicins
[Parvularcula bermudensis HTCC2503]
gi|303299147|gb|ADM08746.1| TolQ protein, inner membrane protein, tolerance to group A colicins
[Parvularcula bermudensis HTCC2503]
Length = 231
Score = 142 bits (359), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 75/216 (34%), Positives = 128/216 (59%), Gaps = 4/216 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D SI+ L +Q + V+ ++ +L S+ SW+++ KS+ ++ + ++FE FWSG+ L
Sbjct: 14 DFSIWGLILQADIVVQFVMLVLAGMSVWSWTIMFDKSMTLGAIKSKAKKFEDQFWSGRPL 73
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+ + + +K+ + +A IFM+ M E+ + D+G P R++ + V + RELE+I
Sbjct: 74 DELGRKVKDKPDHPMARIFMTLMDEFTQ--DRGHGDP-AAASRLESVARVHVNRELEKIQ 130
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCV 188
+LS L ++ SA +G+ G V G+M F+ I N+ V PGI E+L + LGL
Sbjct: 131 SQLSVLATIGSAAPFIGLFGTVWGIMNAFRGIGATGDANLAVVAPGIAEALFATALGLVA 190
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+IP+ I YN++ +A+++EGFA EF AILSR+
Sbjct: 191 AIPAVIGYNRYAAGVNSYAVRLEGFATEFVAILSRR 226
>gi|114771189|ref|ZP_01448609.1| Biopolymer transport protein, TolQ [alpha proteobacterium HTCC2255]
gi|114548114|gb|EAU51001.1| Biopolymer transport protein, TolQ [alpha proteobacterium HTCC2255]
Length = 230
Score = 142 bits (359), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 87/219 (39%), Positives = 130/219 (59%), Gaps = 2/219 (0%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
+D S+ AL+++ VK ++ +L SI SWS+IIQK +N+ R+ F++ FWSG
Sbjct: 12 IDFSVLALYLRATFTVKIVMLMLIFSSIWSWSIIIQKFINYRKARKNAHLFDKAFWSGAP 71
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
L+ + + + + IF++AMSEW++S +G G Q RIDR MDVAIARE E +
Sbjct: 72 LDQLYERVGSDPTGASEKIFVAAMSEWERS-HRGEDLIGGAQQRIDRSMDVAIARESEIL 130
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
L+FL ++ S +G+ G V G+ F+ IA + N+ V PGI E+L++ LGL
Sbjct: 131 NNGLTFLATVGSTAPFIGLFGTVWGIKNAFEEIAIQQNTNLAVVAPGIAEALVATALGLL 190
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ I YNK D+ + E FA+EFS ILSRQ +
Sbjct: 191 AAIPAVIFYNKLSADADRLVGGYESFADEFSTILSRQLD 229
>gi|77464243|ref|YP_353747.1| biopolymer transport protein, TolQ [Rhodobacter sphaeroides 2.4.1]
gi|126463085|ref|YP_001044199.1| MotA/TolQ/ExbB proton channel [Rhodobacter sphaeroides ATCC 17029]
gi|221640127|ref|YP_002526389.1| MotA/TolQ/ExbB proton channel [Rhodobacter sphaeroides KD131]
gi|332559132|ref|ZP_08413454.1| MotA/TolQ/ExbB proton channel [Rhodobacter sphaeroides WS8N]
gi|77388661|gb|ABA79846.1| Biopolymer transport protein, TolQ [Rhodobacter sphaeroides 2.4.1]
gi|126104749|gb|ABN77427.1| MotA/TolQ/ExbB proton channel [Rhodobacter sphaeroides ATCC 17029]
gi|221160908|gb|ACM01888.1| MotA/TolQ/ExbB proton channel [Rhodobacter sphaeroides KD131]
gi|332276844|gb|EGJ22159.1| MotA/TolQ/ExbB proton channel [Rhodobacter sphaeroides WS8N]
Length = 232
Score = 142 bits (359), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 78/220 (35%), Positives = 121/220 (55%), Gaps = 1/220 (0%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
+D S+ ALF + L VK ++ LL + S SW++I++K + + RR+ F++ FWSG+
Sbjct: 12 IDFSMLALFARATLTVKFVMILLIVMSFWSWAIIVRKHLLYRQARREAAIFDRAFWSGEP 71
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
L+ + + L IF + M EW++S G Q RIDR M VAI +E E +
Sbjct: 72 LDELFERLGPQPEGASEKIFAAGMLEWRRSHRNDGGLIAGAQSRIDRSMGVAIDKESETL 131
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA-GYYSNNVVSIPGIIESLISILLGLC 187
LSFL + S +G+ G V G+ F+ IA +N V PGI E+L++ GL
Sbjct: 132 NSGLSFLATTGSTAPFIGLFGTVWGIKHAFEQIAISQNTNLAVVAPGIAEALLATAFGLV 191
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEG 227
+IP+ + YNK DS++ + F++EF+ ILSRQ +
Sbjct: 192 AAIPAVVFYNKLNADSERIIGGYDAFSDEFATILSRQLDA 231
>gi|163733518|ref|ZP_02140961.1| putative proton transporter TolQ [Roseobacter litoralis Och 149]
gi|161393306|gb|EDQ17632.1| putative proton transporter TolQ [Roseobacter litoralis Och 149]
Length = 231
Score = 142 bits (358), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 78/219 (35%), Positives = 124/219 (56%), Gaps = 1/219 (0%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
+D S F LF + + VK ++ +L + S +WSVI+ K + + R + F++ FWSG+
Sbjct: 12 IDFSFFGLFARATIVVKLVMIMLIVASFWAWSVIVIKLILYRKTRHEAAVFDRAFWSGEP 71
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
L+ + + + + G IF + M EW++S G RIDR MDVAI +E E +
Sbjct: 72 LDGLFEEVGPAPSGGTEKIFAAGMMEWQRSHHDDGGLIAGATQRIDRSMDVAINKESEHL 131
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
+ L+ L ++ S+ +G+ G V+G+M F IA + N+ V PGI E+L++ LGL
Sbjct: 132 RDGLTVLATIGSSTPFIGLFGTVIGIMNAFIEIAEQQNTNLAVVAPGIAEALLATGLGLF 191
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ I YNK D+ + E FA+EF+ ILSRQ +
Sbjct: 192 AAIPAVIYYNKLSADADRILAGYESFADEFATILSRQLD 230
>gi|126728383|ref|ZP_01744199.1| proton transporter TolQ [Sagittula stellata E-37]
gi|126711348|gb|EBA10398.1| proton transporter TolQ [Sagittula stellata E-37]
Length = 231
Score = 142 bits (357), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 82/219 (37%), Positives = 126/219 (57%), Gaps = 1/219 (0%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
+D S +ALF + L VK ++ +L SI SW++II+K V++ RR+ F+++FWSG+
Sbjct: 12 IDFSFWALFARATLTVKLVMIMLIAASIWSWAIIIEKFVSYRKARREASRFDRMFWSGEP 71
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
L+ + L +F + M EW++S + Q RIDR MDVAI +E +E+
Sbjct: 72 LDELFDQLGPEPKGRSERVFAAGMIEWRRSHREDGALIANAQSRIDRSMDVAIQKEADEL 131
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLC 187
L L ++ S +G+ G V G+M F IA + ++V + PGI E+L++ LGL
Sbjct: 132 QRGLPVLATVGSTSPFIGLFGTVFGIMHAFVQIAETQNTSLVVVAPGIAEALLATGLGLL 191
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ I YNKF D+ + E FA+EFS ILSRQ +
Sbjct: 192 AAIPAVIFYNKFSADADRIVGNYEAFADEFSTILSRQLD 230
>gi|330991875|ref|ZP_08315824.1| Protein tolQ [Gluconacetobacter sp. SXCC-1]
gi|329760896|gb|EGG77391.1| Protein tolQ [Gluconacetobacter sp. SXCC-1]
Length = 221
Score = 140 bits (354), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 76/217 (35%), Positives = 124/217 (57%), Gaps = 3/217 (1%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
++ALFM + VK ++ L S++ W++I K + + RQ +FE+ FW+G SLE +
Sbjct: 1 MWALFMHASIVVKLVMIGLVSCSVIVWAIIFDKFMTVRRVNRQANDFEERFWAGGSLEDL 60
Query: 73 CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPI--GIQDRIDRMMDVAIARELEEITE 130
+S +AA+F +AM EW++S + G+QDR++R M + I RE++ +
Sbjct: 61 YESDGAKPVHPMAAVFGAAMGEWRRSSRISGIDLVHGGVQDRVNRAMAITITREMDRLNR 120
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVS 189
+ FL ++ +G+ G V G+M F SIA ++ N+ V PGI E+L + +GL +
Sbjct: 121 WIIFLATIGPVAPFIGLFGTVWGIMHAFGSIAAMHNTNLSVVAPGISEALFATAIGLVTA 180
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
IP+ IAYN F +++ F EF+AILSRQ+E
Sbjct: 181 IPAVIAYNVISNSMSVFEDRLDAFGTEFAAILSRQSE 217
>gi|255263319|ref|ZP_05342661.1| protein TolQ [Thalassiobium sp. R2A62]
gi|255105654|gb|EET48328.1| protein TolQ [Thalassiobium sp. R2A62]
Length = 223
Score = 140 bits (354), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/219 (37%), Positives = 127/219 (57%), Gaps = 1/219 (0%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
+D S++ALF + + VK ++ +L I S+ W VI+ K + + R++ F++ FWSG+
Sbjct: 4 VDFSMWALFARATITVKLVMIMLIIASVWCWGVIVDKLIQYRNARKEAGIFDRAFWSGEP 63
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
L+ + + + + IF + M EW++S + G Q RIDR MDVAIARE E++
Sbjct: 64 LDGLFEKIGAEPDGPSEKIFAAGMMEWRRSHRQDGGLIAGAQARIDRAMDVAIARESEKL 123
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
+ L L ++ S VG+ G V G+M F IA ++ N+ V PGI E+L++ LGL
Sbjct: 124 QKGLPVLATVGSTAPFVGLFGTVWGIMNAFIEIAEQHNTNLAVVAPGIAEALLATGLGLL 183
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ I YNK DS + E FA+EF+ ILSRQ +
Sbjct: 184 AAIPAVIYYNKLSADSDRIVGGYEAFADEFATILSRQLD 222
>gi|85706714|ref|ZP_01037806.1| proton transporter TolQ [Roseovarius sp. 217]
gi|85668772|gb|EAQ23641.1| proton transporter TolQ [Roseovarius sp. 217]
Length = 231
Score = 140 bits (353), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 81/219 (36%), Positives = 120/219 (54%), Gaps = 1/219 (0%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
MD S++ALF + VK ++ +L + S SWS+IIQK + + R + F++ FWSG+
Sbjct: 12 MDFSMWALFARATFIVKLVMFMLIVASFWSWSIIIQKIIVYRKARLEAEIFDRRFWSGEP 71
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
L+ + + IF + M EW++S G RIDR MDVAIA+E E +
Sbjct: 72 LDGLFDEIGPDPAGQSERIFAAGMMEWRRSHRNDGNLIAGATARIDRSMDVAIAKESEGL 131
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
L L ++ S +G+ G V G+M F IA + N+ V PGI E+L++ LGL
Sbjct: 132 QSGLQVLATVGSTAPFIGLFGTVWGIMHAFIEIAEQQNTNLAVVAPGIAEALLATGLGLI 191
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ I YNK D+ + E FA+EF+ ILSRQ +
Sbjct: 192 AAIPAVIFYNKLSADADRIVAGYEAFADEFATILSRQLD 230
>gi|209965098|ref|YP_002298013.1| protein TolQ [Rhodospirillum centenum SW]
gi|209958564|gb|ACI99200.1| protein TolQ [Rhodospirillum centenum SW]
Length = 244
Score = 140 bits (353), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 77/222 (34%), Positives = 121/222 (54%), Gaps = 5/222 (2%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
++SI LF+ VK ++ L S+ W++I K+V ++ EFE+ FWSG SL
Sbjct: 20 ELSILGLFLAADWIVKIVMLALVGASVWCWAIIFDKAVKLRRMKAAATEFEEQFWSGGSL 79
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSP----IGIQDRIDRMMDVAIAREL 125
+ + + + L+A F + M EW+ + ++G + + RI+R+M V I RE+
Sbjct: 80 DQLYDEVAANPGDPLSATFAAGMREWRHAAERGLLTTGAMRANLAQRIERVMSVTIGREM 139
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILL 184
++ L S+ S +G+ G V G+M F SIA + ++ V PGI E+L + L
Sbjct: 140 AGAERYMTVLASVGSTAPFIGLFGTVWGIMNAFTSIAAQQNTSLAVVAPGIAEALFATAL 199
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
GL +IP+ IAYNKF D +FA +++ F EFSAIL R E
Sbjct: 200 GLVAAIPAVIAYNKFSTDLGRFADRLDSFTTEFSAILQRHLE 241
>gi|310816580|ref|YP_003964544.1| MotA/TolQ/ExbB proton channel [Ketogulonicigenium vulgare Y25]
gi|308755315|gb|ADO43244.1| MotA/TolQ/ExbB proton channel [Ketogulonicigenium vulgare Y25]
Length = 216
Score = 140 bits (352), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 76/217 (35%), Positives = 123/217 (56%), Gaps = 3/217 (1%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
++ALF + L VK ++ LL + S+ W++++ K + + + + +F++ FWSG+ L+ +
Sbjct: 1 MWALFARATLIVKIVMILLVLASVWCWAIVVDKYIQYRRAKAEAEQFDRAFWSGEPLDLL 60
Query: 73 CKSLKNHHNIGLAAIFMSAMSEWKKSC-DKGARSPIGIQDRIDRMMDVAIARELEEITEK 131
+ + + + +F + M EW++S GA P G RI+R MDV I +E E + +
Sbjct: 61 YQQIGPNPDGASQRVFAAGMGEWRRSHRTDGALIP-GALSRIERAMDVVIGKESERLQKG 119
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSI 190
L L ++ S VG+ G V G+M F IA + N+ V PGI E+L + LGL +I
Sbjct: 120 LPVLATVGSVAPFVGLFGTVWGIMNAFVEIAAQQNTNLAVVAPGIAEALFATGLGLVAAI 179
Query: 191 PSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEG 227
P+ I YNKF D+ + E FA+EFS ILSRQ +
Sbjct: 180 PAVIFYNKFNTDADRITASHEVFADEFSTILSRQLDA 216
>gi|99082208|ref|YP_614362.1| MotA/TolQ/ExbB proton channel [Ruegeria sp. TM1040]
gi|99038488|gb|ABF65100.1| MotA/TolQ/ExbB proton channel [Ruegeria sp. TM1040]
Length = 231
Score = 140 bits (352), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 87/218 (39%), Positives = 127/218 (58%), Gaps = 3/218 (1%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
+D S++ LF + L VK ++ +L + SI SWS+IIQK + + T RR+ + FE+ FWSG
Sbjct: 12 IDFSMWGLFARATLTVKLVMIMLIVASIWSWSIIIQKVITYRTARREAQVFERAFWSGNP 71
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSC-DKGARSPIGIQDRIDRMMDVAIARELEE 127
L+ + + + + IF + M EW++S GA P G Q RIDR MDVAI++E E
Sbjct: 72 LDELFEEIGAEPSGRSERIFAAGMIEWRRSHRTDGALIP-GAQARIDRSMDVAISKESEG 130
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
+ L L ++ S +G+ G V G+M F IA + N+ V PGI E+L++ LGL
Sbjct: 131 LQSGLQVLATIGSTTPFIGLFGTVWGIMNAFIEIAEQQNTNLAVVAPGIAEALLATGLGL 190
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+IP+ I YNK DS + E FA+EF+ I SRQ
Sbjct: 191 LAAIPAVIFYNKLSADSDRIIGGYEAFADEFATIFSRQ 228
>gi|16127463|ref|NP_422027.1| MotA/TolQ/ExbB proton channel family protein [Caulobacter
crescentus CB15]
gi|221236276|ref|YP_002518713.1| TolQ protein [Caulobacter crescentus NA1000]
gi|13424917|gb|AAK25195.1| MotA/TolQ/ExbB proton channel family protein [Caulobacter
crescentus CB15]
gi|220965449|gb|ACL96805.1| TolQ protein [Caulobacter crescentus NA1000]
Length = 232
Score = 138 bits (348), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 83/224 (37%), Positives = 123/224 (54%), Gaps = 8/224 (3%)
Query: 7 AIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG 66
A + S FALFMQ VK ++ L + S+ SW+VI+ K F L R FE+ G
Sbjct: 6 AAPNFSFFALFMQADWVVKSVMIGLILASLGSWAVILDKLFRFQALNRAANRFEEQVSGG 65
Query: 67 QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIG---IQDRIDRMMDVAIAR 123
+SLE V + L + +A+ EW+ + KGA S + RIDR++D IAR
Sbjct: 66 RSLEDVAGEAGANPRHALPRMLQAALKEWRDAKSKGAMSETQAGFLIARIDRILDTQIAR 125
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV---VSIPGIIESLI 180
E ++ E L L +++A +G+ G V G+M FQ+IA S N V P I E+L
Sbjct: 126 ETTKVEEGLGSLAIVATASPFIGLFGTVWGIMHAFQNIA--LSKNTSLAVVAPSIAEALF 183
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+ +GL +IP+ IAYNKF D+ K+A ++EGFA++ S + R+
Sbjct: 184 ATAIGLIAAIPAYIAYNKFSTDAGKYAGRLEGFADDLSTAIQRR 227
>gi|218461494|ref|ZP_03501585.1| protein transporter protein [Rhizobium etli Kim 5]
Length = 122
Score = 138 bits (348), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 62/118 (52%), Positives = 88/118 (74%)
Query: 7 AIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG 66
A D+S+++LFMQ G+ VK ++ L S+ +W+++I K + + RRQF +FEQ+FWSG
Sbjct: 4 ATTDVSLWSLFMQAGIVVKLVMLGLIAASVWTWAIVIDKYLAYGRARRQFDKFEQVFWSG 63
Query: 67 QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARE 124
QSLE + +SL +N GLA+IF++AM EWKKS ++GARSPIG+Q RIDR MD +ARE
Sbjct: 64 QSLEELYRSLSERNNTGLASIFVAAMREWKKSFERGARSPIGLQMRIDRAMDATLARE 121
>gi|89068043|ref|ZP_01155460.1| proton transporter TolQ [Oceanicola granulosus HTCC2516]
gi|89046282|gb|EAR52339.1| proton transporter TolQ [Oceanicola granulosus HTCC2516]
Length = 224
Score = 138 bits (348), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 85/222 (38%), Positives = 125/222 (56%), Gaps = 1/222 (0%)
Query: 7 AIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG 66
A D S++ALF + LAVK ++ LL SI W+VI+ K + + R + F++ FWSG
Sbjct: 3 AATDFSMWALFARATLAVKFVMILLIGASIWCWAVIVDKWLQYQRARAEAARFDRSFWSG 62
Query: 67 QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
+ L+ + + + IF + M+EW++S + G Q RIDR MDVAIA+E
Sbjct: 63 EPLDGLYEEIGPTPKGQSQKIFAAGMTEWRRSHRQDGGLIAGAQARIDRSMDVAIAKEAG 122
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLG 185
+ L L ++ S +G+LG V G+M F IA + N+ V PGI E+L++ LG
Sbjct: 123 RLQRGLPVLATVGSTAPFIGLLGTVWGIMNAFIEIAEQQNTNLAVVAPGIAEALLATGLG 182
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEG 227
L +IP+ I YNK D+ + E FA+EFS ILSRQ +G
Sbjct: 183 LLAAIPAVIFYNKLSADADRIVSGYEAFADEFSTILSRQLDG 224
>gi|127512453|ref|YP_001093650.1| MotA/TolQ/ExbB proton channel [Shewanella loihica PV-4]
gi|126637748|gb|ABO23391.1| MotA/TolQ/ExbB proton channel [Shewanella loihica PV-4]
Length = 229
Score = 138 bits (348), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 78/219 (35%), Positives = 121/219 (55%), Gaps = 5/219 (2%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
DIS LF+Q L VK ++ L S++SW+VIIQ+ + R++ +FE FWSG L
Sbjct: 4 DISFIGLFLQASLLVKFVMLTLLALSVVSWAVIIQRRRLLTSARQRSLKFEDKFWSGVDL 63
Query: 70 ETVCKSL--KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ K L + N GL A+F + E+ + + + P + D R M V+++RELE+
Sbjct: 64 NKLYKELSARQESNTGLEAMFYAGFKEYARLSNLNGKVPAAVMDGCYRAMRVSLSRELEK 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI--PGIIESLISILLG 185
+ L L ++ S +G+ G V G+M F ++ G N +++ PGI E+LI+ +G
Sbjct: 124 LETHLPLLATIGSTSPYIGLFGTVWGIMNSFIAL-GAVENATLAMVAPGIAEALIATAMG 182
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
L +IP+ IAYN+F +K M F EFS+IL RQ
Sbjct: 183 LFAAIPAVIAYNRFSTQVEKIEMSYANFMEEFSSILHRQ 221
>gi|254511091|ref|ZP_05123158.1| protein TolQ [Rhodobacteraceae bacterium KLH11]
gi|221534802|gb|EEE37790.1| protein TolQ [Rhodobacteraceae bacterium KLH11]
Length = 231
Score = 136 bits (343), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/219 (36%), Positives = 124/219 (56%), Gaps = 1/219 (0%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
+D S++ L+ + VK ++ +L SI SW++IIQK +N+ RR+ + F++ FWSG
Sbjct: 12 IDFSMWGLYARATFIVKLVMLMLIGASIWSWAIIIQKLINYRAARREAQVFDESFWSGNP 71
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
L+ + + + + IF + M EW++S G RIDR MDVAIA+E E +
Sbjct: 72 LDELFERIGTQPDGSSEKIFAAGMIEWRRSHRTDGGLIAGATARIDRSMDVAIAKEAEAL 131
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
+ L L ++ S +G+ G V G+M F IA + N+ V PGI E+L++ LGL
Sbjct: 132 QKGLPILATVGSTAPFIGLFGTVWGIMNAFIEIAEQQNTNLAVVAPGIAEALLATGLGLL 191
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ I YNK DS + E FA+EF+ ILSRQ +
Sbjct: 192 AAIPAVIFYNKLSADSDRIVGGYEAFADEFATILSRQLD 230
>gi|296283274|ref|ZP_06861272.1| TolQ, tolQ protein [Citromicrobium bathyomarinum JL354]
Length = 237
Score = 136 bits (342), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 74/212 (34%), Positives = 119/212 (56%), Gaps = 2/212 (0%)
Query: 16 LFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKS 75
LFM + VK ++ L + SI SW +II ++ +++ R+FEQ FW+ ++ E +
Sbjct: 25 LFMDADIVVKAVMAALLLASIWSWMIIISVAMKIGGAKKRARKFEQDFWASENYEETLDA 84
Query: 76 LKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFL 135
+N ++ A I A++EWKKS G + G Q RI +MD +A E + + +L+FL
Sbjct: 85 YRNQ-DVAPARIAWGAITEWKKSTKGGVKDVRGAQGRIAAVMDSHVAEEADRMANRLTFL 143
Query: 136 GSMSSAGLLVGILGAVLGMMG-FFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSI 194
++ S VG+ G V G+M FFQ A S+ V PGI E+L + +GL +IP+ I
Sbjct: 144 ATLGSVAPFVGLFGTVWGIMNSFFQIGAQNNSSLAVVAPGISEALFATAIGLFAAIPAVI 203
Query: 195 AYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
AYN+F ++ ++ FA+ F+A L R+ E
Sbjct: 204 AYNRFSASVNRYEAILQRFADRFNANLGRELE 235
>gi|83719386|ref|YP_441922.1| tolQ protein [Burkholderia thailandensis E264]
gi|167580766|ref|ZP_02373640.1| tolQ protein [Burkholderia thailandensis TXDOH]
gi|167618869|ref|ZP_02387500.1| tolQ protein [Burkholderia thailandensis Bt4]
gi|167837691|ref|ZP_02464574.1| tolQ protein [Burkholderia thailandensis MSMB43]
gi|257138093|ref|ZP_05586355.1| tolQ protein [Burkholderia thailandensis E264]
gi|83653211|gb|ABC37274.1| tolQ protein [Burkholderia thailandensis E264]
Length = 225
Score = 136 bits (342), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 75/220 (34%), Positives = 121/220 (55%), Gaps = 3/220 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+SI +L + + + ++ LL + S++SW+ I +K R Q FE+ FWSG L
Sbjct: 6 DLSIISLVLNASVLAQAVMGLLLVLSLMSWTFIFRKWFAIRRARAQTERFERDFWSGGDL 65
Query: 70 ETVCKSL-KNHHNIG-LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + +S N H IG L IF S M E+ K+ +K P + D R M + RE++
Sbjct: 66 QALYQSAANNRHTIGALERIFESGMREFLKAKEKRLNDPALLLDGARRAMRASFQREMDV 125
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ LSFL S+ S +G+ G V G+M F+ +A + ++ PGI E+L++ +GL
Sbjct: 126 LESNLSFLASVGSVSPYIGLFGTVWGIMNSFRGLANVQQATLANVAPGIAEALVATAIGL 185
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ +AYN++ D + A++ E F EFS IL RQ +
Sbjct: 186 FAAIPAVVAYNRYAHDIDRLAIRFETFIEEFSNILQRQAQ 225
>gi|167563916|ref|ZP_02356832.1| tolQ protein [Burkholderia oklahomensis EO147]
gi|167571051|ref|ZP_02363925.1| tolQ protein [Burkholderia oklahomensis C6786]
Length = 225
Score = 135 bits (341), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 76/220 (34%), Positives = 121/220 (55%), Gaps = 3/220 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+SI +L + + + ++ LL I S++SW+ I +K R Q FE+ FWSG L
Sbjct: 6 DLSIISLVLNASVLAQAVMGLLLILSLMSWTFIFRKWFAIRRARAQTERFERDFWSGGDL 65
Query: 70 ETVCKSL-KNHHNIG-LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + +S N H IG L IF S M E+ K+ +K P + D R M + RE++
Sbjct: 66 QALYQSAANNRHTIGALERIFESGMREFLKAKEKRLSDPALLLDGARRAMRASFQREMDV 125
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ LSFL S+ S +G+ G V G+M F+ +A + ++ PGI E+L++ +GL
Sbjct: 126 LESNLSFLASVGSVSPYIGLFGTVWGIMNSFRGLANVQQATLANVAPGIAEALVATAIGL 185
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ +AYN++ D + A++ E F EFS IL RQ +
Sbjct: 186 FAAIPAVVAYNRYAHDIDRLAIRFETFIEEFSNILQRQAQ 225
>gi|259417777|ref|ZP_05741696.1| protein TolQ [Silicibacter sp. TrichCH4B]
gi|259346683|gb|EEW58497.1| protein TolQ [Silicibacter sp. TrichCH4B]
Length = 231
Score = 135 bits (341), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 85/220 (38%), Positives = 127/220 (57%), Gaps = 3/220 (1%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
+D S++ LF + L VK ++ +L SI SWS+I QK + + + RR+ + FE+ FWSG
Sbjct: 12 IDFSMWGLFARATLTVKLVMIMLIGASIWSWSIIAQKLITYRSARREAQVFERAFWSGNP 71
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSC-DKGARSPIGIQDRIDRMMDVAIARELEE 127
L+ + + + + IF + M+EW++S GA P G Q RIDR MDVAI++E E
Sbjct: 72 LDELYEDIGADPSGHSERIFAAGMTEWRRSHRTDGALIP-GAQARIDRSMDVAISKESEG 130
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
+ L L ++ S +G+ G V G+M F IA + N+ V PGI E+L++ LGL
Sbjct: 131 LQGGLQILATIGSTAPFIGLFGTVWGIMNAFIEIAEQQNTNLAVVAPGIAEALLATGLGL 190
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ I YNK DS + E FA+EF+ I SRQ +
Sbjct: 191 LAAIPAVIFYNKLSADSDRIIGGYEAFADEFATIFSRQLD 230
>gi|83746174|ref|ZP_00943228.1| TolQ protein [Ralstonia solanacearum UW551]
gi|207728185|ref|YP_002256579.1| tolq-related transport protein [Ralstonia solanacearum MolK2]
gi|83727140|gb|EAP74264.1| TolQ protein [Ralstonia solanacearum UW551]
gi|206591430|emb|CAQ57042.1| tolq-related transport protein [Ralstonia solanacearum MolK2]
Length = 254
Score = 135 bits (341), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 76/229 (33%), Positives = 121/229 (52%), Gaps = 5/229 (2%)
Query: 3 NYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQL 62
N D+SI +L + L V+ ++ LL + S+ SW+ I +K+ R Q FE+
Sbjct: 26 NPAEVTQDLSIVSLVLHASLLVQFVMGLLLVMSLFSWTYIFRKAFALRAARSQTESFERD 85
Query: 63 FWSGQSLETVCKSLKN--HHNIGLAAIFMSAMSEWKKSCD--KGARSPIGIQDRIDRMMD 118
FW+G L+ + +S N HH L IF + M E+ K+ + +G P I D R M
Sbjct: 86 FWAGGDLQAMYQSAANNRHHTGALERIFEAGMREFLKTREQQRGIGDPSAILDASRRAMR 145
Query: 119 VAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIE 177
A RE++ + L FL S+ S +G+ G V G+M F+ ++ + ++ PGI E
Sbjct: 146 AAYQREMDSLESHLPFLASVGSVSPYIGLFGTVWGIMNAFRGLSNVQQATLSAVAPGIAE 205
Query: 178 SLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+L++ +GL +IP+ IAYN++ + + A + E F EFS IL RQT
Sbjct: 206 ALVATAIGLFAAIPAVIAYNRYATEMDRLANRFESFMEEFSNILQRQTR 254
>gi|53725622|ref|YP_103657.1| tolQ protein [Burkholderia mallei ATCC 23344]
gi|67643923|ref|ZP_00442666.1| protein TolQ [Burkholderia mallei GB8 horse 4]
gi|121600116|ref|YP_992170.1| tolQ protein [Burkholderia mallei SAVP1]
gi|124383938|ref|YP_001028616.1| tolQ protein [Burkholderia mallei NCTC 10229]
gi|126441853|ref|YP_001060212.1| MotA/TolQ/ExbB proton channel family protein [Burkholderia
pseudomallei 668]
gi|126448943|ref|YP_001081483.1| tolQ protein [Burkholderia mallei NCTC 10247]
gi|126452711|ref|YP_001067476.1| MotA/TolQ/ExbB proton channel family protein [Burkholderia
pseudomallei 1106a]
gi|166998273|ref|ZP_02264133.1| protein TolQ [Burkholderia mallei PRL-20]
gi|167720987|ref|ZP_02404223.1| tolQ protein [Burkholderia pseudomallei DM98]
gi|167739944|ref|ZP_02412718.1| tolQ protein [Burkholderia pseudomallei 14]
gi|167817181|ref|ZP_02448861.1| tolQ protein [Burkholderia pseudomallei 91]
gi|167825594|ref|ZP_02457065.1| tolQ protein [Burkholderia pseudomallei 9]
gi|167847078|ref|ZP_02472586.1| tolQ protein [Burkholderia pseudomallei B7210]
gi|167895662|ref|ZP_02483064.1| tolQ protein [Burkholderia pseudomallei 7894]
gi|167904055|ref|ZP_02491260.1| tolQ protein [Burkholderia pseudomallei NCTC 13177]
gi|167912312|ref|ZP_02499403.1| tolQ protein [Burkholderia pseudomallei 112]
gi|167920269|ref|ZP_02507360.1| tolQ protein [Burkholderia pseudomallei BCC215]
gi|226194311|ref|ZP_03789910.1| protein TolQ [Burkholderia pseudomallei Pakistan 9]
gi|237813602|ref|YP_002898053.1| protein TolQ [Burkholderia pseudomallei MSHR346]
gi|242314143|ref|ZP_04813159.1| protein TolQ [Burkholderia pseudomallei 1106b]
gi|254175704|ref|ZP_04882364.1| tolQ protein [Burkholderia mallei ATCC 10399]
gi|254180827|ref|ZP_04887425.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei 1655]
gi|254191665|ref|ZP_04898168.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei Pasteur 52237]
gi|254194925|ref|ZP_04901355.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei S13]
gi|254202354|ref|ZP_04908717.1| protein TolQ [Burkholderia mallei FMH]
gi|254207688|ref|ZP_04914038.1| protein TolQ [Burkholderia mallei JHU]
gi|254260751|ref|ZP_04951805.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei 1710a]
gi|254299062|ref|ZP_04966512.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei 406e]
gi|254356410|ref|ZP_04972686.1| protein TolQ [Burkholderia mallei 2002721280]
gi|52429045|gb|AAU49638.1| tolQ protein [Burkholderia mallei ATCC 23344]
gi|121228926|gb|ABM51444.1| tolQ protein [Burkholderia mallei SAVP1]
gi|124291958|gb|ABN01227.1| protein TolQ [Burkholderia mallei NCTC 10229]
gi|126221346|gb|ABN84852.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei 668]
gi|126226353|gb|ABN89893.1| protein TolQ [Burkholderia pseudomallei 1106a]
gi|126241813|gb|ABO04906.1| protein TolQ [Burkholderia mallei NCTC 10247]
gi|147746601|gb|EDK53678.1| protein TolQ [Burkholderia mallei FMH]
gi|147751582|gb|EDK58649.1| protein TolQ [Burkholderia mallei JHU]
gi|148025407|gb|EDK83561.1| protein TolQ [Burkholderia mallei 2002721280]
gi|157808950|gb|EDO86120.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei 406e]
gi|157939336|gb|EDO95006.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei Pasteur 52237]
gi|160696748|gb|EDP86718.1| tolQ protein [Burkholderia mallei ATCC 10399]
gi|169651674|gb|EDS84367.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei S13]
gi|184211366|gb|EDU08409.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei 1655]
gi|225933776|gb|EEH29764.1| protein TolQ [Burkholderia pseudomallei Pakistan 9]
gi|237504440|gb|ACQ96758.1| protein TolQ [Burkholderia pseudomallei MSHR346]
gi|238525392|gb|EEP88820.1| protein TolQ [Burkholderia mallei GB8 horse 4]
gi|242137382|gb|EES23784.1| protein TolQ [Burkholderia pseudomallei 1106b]
gi|243065353|gb|EES47539.1| protein TolQ [Burkholderia mallei PRL-20]
gi|254219440|gb|EET08824.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei 1710a]
Length = 225
Score = 135 bits (340), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 75/220 (34%), Positives = 121/220 (55%), Gaps = 3/220 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+SI +L + + + ++ LL + S++SW+ I +K R Q FE+ FWSG L
Sbjct: 6 DLSIISLVLNASVLAQAVMGLLLVLSLMSWTFIFRKWFAIRRARAQTERFERDFWSGGDL 65
Query: 70 ETVCKSL-KNHHNIG-LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + +S N H IG L IF S M E+ K+ +K P + D R M + RE++
Sbjct: 66 QALYQSAANNRHTIGALERIFESGMREFLKAKEKRLSDPALLLDGARRAMRASFQREMDV 125
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ LSFL S+ S +G+ G V G+M F+ +A + ++ PGI E+L++ +GL
Sbjct: 126 LESNLSFLASVGSVSPYIGLFGTVWGIMNSFRGLANVQQATLANVAPGIAEALVATAIGL 185
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ +AYN++ D + A++ E F EFS IL RQ +
Sbjct: 186 FAAIPAVVAYNRYAHDIDRLAIRFETFIEEFSNILQRQAQ 225
>gi|53720371|ref|YP_109357.1| putative TolQ transport transmembrane protein [Burkholderia
pseudomallei K96243]
gi|76811339|ref|YP_334625.1| tolQ protein [Burkholderia pseudomallei 1710b]
gi|52210785|emb|CAH36769.1| putative TolQ transport transmembrane protein [Burkholderia
pseudomallei K96243]
gi|76580792|gb|ABA50267.1| tolQ protein [Burkholderia pseudomallei 1710b]
Length = 262
Score = 135 bits (339), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 75/220 (34%), Positives = 121/220 (55%), Gaps = 3/220 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+SI +L + + + ++ LL + S++SW+ I +K R Q FE+ FWSG L
Sbjct: 43 DLSIISLVLNASVLAQAVMGLLLVLSLMSWTFIFRKWFAIRRARAQTERFERDFWSGGDL 102
Query: 70 ETVCKSL-KNHHNIG-LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + +S N H IG L IF S M E+ K+ +K P + D R M + RE++
Sbjct: 103 QALYQSAANNRHTIGALERIFESGMREFLKAKEKRLSDPALLLDGARRAMRASFQREMDV 162
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ LSFL S+ S +G+ G V G+M F+ +A + ++ PGI E+L++ +GL
Sbjct: 163 LESNLSFLASVGSVSPYIGLFGTVWGIMNSFRGLANVQQATLANVAPGIAEALVATAIGL 222
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ +AYN++ D + A++ E F EFS IL RQ +
Sbjct: 223 FAAIPAVVAYNRYAHDIDRLAIRFETFIEEFSNILQRQAQ 262
>gi|300692240|ref|YP_003753235.1| protein tolQ, essential components of the Tol-Pal system [Ralstonia
solanacearum PSI07]
gi|299079300|emb|CBJ51972.1| Protein tolQ, essential components of the Tol-Pal system [Ralstonia
solanacearum PSI07]
Length = 230
Score = 134 bits (338), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 76/222 (34%), Positives = 121/222 (54%), Gaps = 5/222 (2%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+SI +L + L V+ ++ LL + S+ SW+ I +K+ R Q FE+ FW+G L
Sbjct: 9 DLSIVSLVLHASLLVQFVMGLLLVMSLFSWTYIFRKAFALRAARSQTESFERDFWAGGDL 68
Query: 70 ETVCKSL-KNHHNIG-LAAIFMSAMSEWKKSCD--KGARSPIGIQDRIDRMMDVAIAREL 125
+ + +S N HN G L IF + M E+ K+ + +G P I D R M A RE+
Sbjct: 69 QAMYQSAANNRHNTGALERIFEAGMREFLKTREQQRGIGDPSAILDASRRAMRAAYQREM 128
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILL 184
+ + L FL S+ S +G+ G V G+M F+ ++ + ++ PGI E+L++ +
Sbjct: 129 DSLESHLPFLASVGSVSPYIGLFGTVWGIMNAFRGLSNVQQATLSAVAPGIAEALVATAI 188
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
GL +IP+ IAYN++ + + A + E F EFS IL RQT
Sbjct: 189 GLFAAIPAVIAYNRYATEMDRLANRFESFMEEFSNILQRQTR 230
>gi|89053461|ref|YP_508912.1| MotA/TolQ/ExbB proton channel [Jannaschia sp. CCS1]
gi|88863010|gb|ABD53887.1| Cell division and transport-associated protein TolQ [Jannaschia sp.
CCS1]
Length = 230
Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 83/218 (38%), Positives = 121/218 (55%), Gaps = 5/218 (2%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D ++ ALF + L V+ ++ L + S+ W++ K F R F+ FWSG+ L
Sbjct: 13 DFTLIALFFRASLIVQLVMIALIVASVWVWAIAFSKFAMFRKARANAATFDATFWSGEPL 72
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSC-DKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ ++ +F++ M+EW++S D GA P G+Q R+DR MDVAIARE +
Sbjct: 73 DEYYDTVAEAPRSASERVFVAGMTEWRRSLRDDGALIP-GVQQRVDRSMDVAIARESGRM 131
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA--GYYSNNVVSIPGIIESLISILLGL 186
T L+FL + + VG+ G V G+M FQ IA G S VV+ PGI E+L++ LGL
Sbjct: 132 TNGLTFLATTGATAPFVGLFGTVWGIMRSFQEIAISGQTSLAVVA-PGIAEALLATGLGL 190
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+IP+ I YNK D+ E FA+EFS +LSRQ
Sbjct: 191 LAAIPAVILYNKLSNDADTIIGTYESFADEFSTLLSRQ 228
>gi|134280048|ref|ZP_01766759.1| protein TolQ [Burkholderia pseudomallei 305]
gi|217421193|ref|ZP_03452698.1| protein TolQ [Burkholderia pseudomallei 576]
gi|134248055|gb|EBA48138.1| protein TolQ [Burkholderia pseudomallei 305]
gi|217396605|gb|EEC36622.1| protein TolQ [Burkholderia pseudomallei 576]
Length = 225
Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 75/220 (34%), Positives = 120/220 (54%), Gaps = 3/220 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+SI +L + + + ++ LL S++SW+ I +K R Q FE+ FWSG L
Sbjct: 6 DLSIISLVLNASVLAQAVMGLLLALSLMSWTFIFRKWFAIRRARAQTERFERDFWSGGDL 65
Query: 70 ETVCKSL-KNHHNIG-LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + +S N H IG L IF S M E+ K+ +K P + D R M + RE++
Sbjct: 66 QALYQSAANNRHTIGALERIFESGMREFLKAKEKRLSDPALLLDGARRAMRASFQREMDV 125
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ LSFL S+ S +G+ G V G+M F+ +A + ++ PGI E+L++ +GL
Sbjct: 126 LESNLSFLASVGSVSPYIGLFGTVWGIMNSFRGLANVQQATLANVAPGIAEALVATAIGL 185
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ +AYN++ D + A++ E F EFS IL RQ +
Sbjct: 186 FAAIPAVVAYNRYAHDIDRLAIRFETFIEEFSNILQRQAQ 225
>gi|187927777|ref|YP_001898264.1| protein TolQ [Ralstonia pickettii 12J]
gi|187724667|gb|ACD25832.1| protein TolQ [Ralstonia pickettii 12J]
Length = 230
Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 75/222 (33%), Positives = 120/222 (54%), Gaps = 5/222 (2%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+SI +L + L V+ ++ LL + S+ SW+ I +K+ R Q FE+ FW+G L
Sbjct: 9 DLSIVSLVLHASLLVQFVMGLLLVMSLFSWTYIFRKAFALRAARSQTESFERDFWAGGDL 68
Query: 70 ETVCKSL-KNHHNIG-LAAIFMSAMSEWKKSCD--KGARSPIGIQDRIDRMMDVAIAREL 125
+ + +S N H G L IF + M E+ K+ + +G P I D R M A RE+
Sbjct: 69 QALYQSAANNRHTTGALERIFEAGMREYLKARELQRGGGDPSAILDASRRAMRAAYQREM 128
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILL 184
+ + L FL S+ S +G+ G V G+M F+ ++ + ++ PGI E+L++ +
Sbjct: 129 DSLESHLPFLASVGSVSPYIGLFGTVWGIMNAFRGLSNVQQATLSAVAPGIAEALVATAI 188
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
GL +IP+ IAYN++ + + A + E F EFS IL RQT
Sbjct: 189 GLFAAIPAVIAYNRYATEMDRLANRFESFMEEFSNILQRQTR 230
>gi|170727079|ref|YP_001761105.1| protein TolQ [Shewanella woodyi ATCC 51908]
gi|169812426|gb|ACA87010.1| protein TolQ [Shewanella woodyi ATCC 51908]
Length = 229
Score = 134 bits (336), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 78/219 (35%), Positives = 117/219 (53%), Gaps = 5/219 (2%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
DIS LF+Q L VK ++ L S++SW+VIIQ+ R+ +FE FWSG L
Sbjct: 4 DISFIGLFLQASLLVKFVMLTLLALSVVSWAVIIQRRRLLTAARQSSLKFEDKFWSGVDL 63
Query: 70 ETVCKSL--KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ K L + N GL A+F S E+ + + P + D R M V+++RE+E+
Sbjct: 64 NKLYKELSARQDSNAGLEALFHSGFKEYARLSKLNNKVPEAVMDGSYRAMRVSLSREMEK 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI--PGIIESLISILLG 185
+ L L ++ S +G+ G V G+M F ++ G N +++ PGI E+LI+ +G
Sbjct: 124 LETHLPLLATIGSTSPYIGLFGTVWGIMNSFIAL-GAVENATLAMVAPGIAEALIATAMG 182
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
L +IP+ IAYN+F K M F EFS+IL RQ
Sbjct: 183 LFAAIPAVIAYNRFSTQVDKIEMSYANFMEEFSSILHRQ 221
>gi|237746668|ref|ZP_04577148.1| TolQ protein [Oxalobacter formigenes HOxBLS]
gi|229378019|gb|EEO28110.1| TolQ protein [Oxalobacter formigenes HOxBLS]
Length = 229
Score = 134 bits (336), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 76/224 (33%), Positives = 122/224 (54%), Gaps = 10/224 (4%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S +L L V+ I+ LL + S++SW+ I QK R + FE FWSG +L
Sbjct: 8 DLSFISLIANASLLVQLIMALLVVVSLMSWTFIFQKMFAIKNARVETENFEHAFWSGGNL 67
Query: 70 ETVCKSLKNHHNIG-LAAIFMSAMSEWKKSCDKGARSPIGIQDRI------DRMMDVAIA 122
+++ + N++ G L IF + M E+ K K A +P QD + R M A
Sbjct: 68 QSLYQRAGNNNRTGALERIFYAGMGEYLKG--KNAMTPHSTQDAVALLDGARRAMRAAYQ 125
Query: 123 RELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLIS 181
RE++ + L+FL S+ S VG+ G V G+M F+ +A + + ++ PGI E+LI+
Sbjct: 126 REMDSLESHLAFLASVGSVSPYVGLFGTVWGIMNAFRGLANVHQATLATVAPGIAEALIA 185
Query: 182 ILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+GL +IP+ +AYN++ D + +++ E F EFS IL RQ+
Sbjct: 186 TAIGLFAAIPAVVAYNRYSHDIDRLSIRFETFIEEFSNILQRQS 229
>gi|309780837|ref|ZP_07675578.1| protein TolQ [Ralstonia sp. 5_7_47FAA]
gi|308920519|gb|EFP66175.1| protein TolQ [Ralstonia sp. 5_7_47FAA]
Length = 230
Score = 134 bits (336), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 75/222 (33%), Positives = 120/222 (54%), Gaps = 5/222 (2%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+SI +L + L V+ ++ LL + S+ SW+ I +K+ R Q FE+ FW+G L
Sbjct: 9 DLSIVSLVLHASLLVQFVMGLLLVMSLFSWTYIFRKAFALRAARSQTESFERDFWAGGDL 68
Query: 70 ETVCKSL-KNHHNIG-LAAIFMSAMSEWKKSCD--KGARSPIGIQDRIDRMMDVAIAREL 125
+ + +S N H G L IF + M E+ K+ + +G P I D R M A RE+
Sbjct: 69 QALYQSAANNRHTTGALERIFEAGMREYLKARELQRGGGDPSAILDASRRAMRAAYQREM 128
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILL 184
+ + L FL S+ S +G+ G V G+M F+ ++ + ++ PGI E+L++ +
Sbjct: 129 DSLEPHLPFLASVGSVSPYIGLFGTVWGIMNAFRGLSNVQQATLSAVAPGIAEALVATAI 188
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
GL +IP+ IAYN++ + + A + E F EFS IL RQT
Sbjct: 189 GLFAAIPAVIAYNRYATEIDRLANRFESFMEEFSNILQRQTR 230
>gi|241662338|ref|YP_002980698.1| protein TolQ [Ralstonia pickettii 12D]
gi|240864365|gb|ACS62026.1| protein TolQ [Ralstonia pickettii 12D]
Length = 230
Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 75/222 (33%), Positives = 120/222 (54%), Gaps = 5/222 (2%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+SI +L + L V+ ++ LL + S+ SW+ I +K+ R Q FE+ FW+G L
Sbjct: 9 DLSIVSLVLHASLLVQFVMGLLLVMSLFSWTYIFRKAFALRAARSQTESFERDFWAGGDL 68
Query: 70 ETVCKSL-KNHHNIG-LAAIFMSAMSEWKKSCD--KGARSPIGIQDRIDRMMDVAIAREL 125
+ + +S N H G L IF + M E+ K+ + +G P I D R M A RE+
Sbjct: 69 QALYQSAANNRHTTGALERIFEAGMREYLKARELQRGGGDPSAILDASRRAMRAAYQREM 128
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILL 184
+ + L FL S+ S +G+ G V G+M F+ ++ + ++ PGI E+L++ +
Sbjct: 129 DSLESHLPFLASVGSVSPYIGLFGTVWGIMNAFRGLSNVQQATLSAVAPGIAEALVATAI 188
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
GL +IP+ IAYN++ + + A + E F EFS IL RQT
Sbjct: 189 GLFAAIPAVIAYNRYATEIDRLANRFESFMEEFSNILQRQTR 230
>gi|289207748|ref|YP_003459814.1| protein TolQ [Thioalkalivibrio sp. K90mix]
gi|288943379|gb|ADC71078.1| protein TolQ [Thioalkalivibrio sp. K90mix]
Length = 230
Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 75/222 (33%), Positives = 124/222 (55%), Gaps = 6/222 (2%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
+D S++ L M+ L V+ ++ +L + S+LSW II K+ + R +FE+ FWSG
Sbjct: 3 VDFSMYQLVMEATLVVQLVMVILVLASVLSWLAIIVKARSLNAAHRACDDFEERFWSGAD 62
Query: 69 LETVCKSLKNHHNI-GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
L + + ++ + G+ +F S E+ ++ G P G + R M VAIARE++E
Sbjct: 63 LSHLYEGVRRKQEMTGMEHVFSSGFKEFLRARQHGI--PAG--EPAQRAMRVAIAREIDE 118
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ L FL ++ S +G+ G V G+M F ++G + + PGI E+LI+ LGL
Sbjct: 119 MERYLQFLATVGSTSPYIGLFGTVWGIMHAFLGLSGVQQATLAMVAPGIAEALIATALGL 178
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
+IP+ IAYN+F D + A+++E F +EF A+L+RQ
Sbjct: 179 FAAIPAVIAYNRFAGDVDRVAVRLENFNDEFVALLNRQVHAK 220
>gi|153000264|ref|YP_001365945.1| Tol-Pal system TolQ [Shewanella baltica OS185]
gi|160874897|ref|YP_001554213.1| protein TolQ [Shewanella baltica OS195]
gi|217973707|ref|YP_002358458.1| protein TolQ [Shewanella baltica OS223]
gi|304409841|ref|ZP_07391461.1| protein TolQ [Shewanella baltica OS183]
gi|307304197|ref|ZP_07583950.1| protein TolQ [Shewanella baltica BA175]
gi|151364882|gb|ABS07882.1| Tol-Pal system TolQ [Shewanella baltica OS185]
gi|160860419|gb|ABX48953.1| protein TolQ [Shewanella baltica OS195]
gi|217498842|gb|ACK47035.1| protein TolQ [Shewanella baltica OS223]
gi|304352359|gb|EFM16757.1| protein TolQ [Shewanella baltica OS183]
gi|306913095|gb|EFN43518.1| protein TolQ [Shewanella baltica BA175]
gi|315267134|gb|ADT93987.1| protein TolQ [Shewanella baltica OS678]
Length = 228
Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 75/218 (34%), Positives = 119/218 (54%), Gaps = 4/218 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+SI LF+Q L VK ++ L S++SW+VI+Q+ + + + +FE FWSG L
Sbjct: 4 DMSIVGLFLQASLLVKFVMFTLLCLSVMSWTVILQRRSLLTSAKSKSAKFEDKFWSGVDL 63
Query: 70 ETVCKSLKNH-HNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ K L N GL ++F++ E+ + ++ P + D R M V ++RE+E++
Sbjct: 64 NRLYKELSTRPDNSGLESLFVTGFKEYSRLNKLNSKVPDAVMDGTSRAMRVTLSREMEKL 123
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI--PGIIESLISILLGL 186
L L ++ S +G+ G V G+M F +I G N +++ PGI E+LI+ +GL
Sbjct: 124 EANLPLLATIGSTSPYIGLFGTVWGIMNSFIAI-GSMENATLAMVAPGIAEALIATAMGL 182
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+IP+ IAYN+F K M F EFS+IL RQ
Sbjct: 183 FAAIPAVIAYNRFSTQVDKLEMAYANFMEEFSSILHRQ 220
>gi|114047935|ref|YP_738485.1| MotA/TolQ/ExbB proton channel [Shewanella sp. MR-7]
gi|117920975|ref|YP_870167.1| MotA/TolQ/ExbB proton channel [Shewanella sp. ANA-3]
gi|113889377|gb|ABI43428.1| MotA/TolQ/ExbB proton channel [Shewanella sp. MR-7]
gi|117613307|gb|ABK48761.1| MotA/TolQ/ExbB proton channel [Shewanella sp. ANA-3]
Length = 228
Score = 133 bits (334), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 75/218 (34%), Positives = 120/218 (55%), Gaps = 4/218 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+SI LF+Q L VK ++ L S++SW+VI+Q+ + + + +FE FWSG L
Sbjct: 4 DMSIVGLFLQASLLVKFVMFTLLCLSVMSWTVILQRRSLLTSAKSKSAKFEDKFWSGVDL 63
Query: 70 ETVCKSLK-NHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ K L N GL ++F++ E+ + ++ P + D R M V ++RELE++
Sbjct: 64 NRLYKELSARPDNTGLESLFVTGFKEYSRLNKLNSKVPDAVMDGTSRAMRVTLSRELEKL 123
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI--PGIIESLISILLGL 186
L L ++ S +G+ G V G+M F +I G N +++ PGI E+LI+ +GL
Sbjct: 124 EANLPLLATIGSTSPYIGLFGTVWGIMNSFIAI-GSMENATLAMVAPGIAEALIATAMGL 182
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+IP+ IAYN+F +K + F EFS+IL RQ
Sbjct: 183 FAAIPAVIAYNRFATQVEKLEIGYANFMEEFSSILHRQ 220
>gi|157962388|ref|YP_001502422.1| Tol-Pal system TolQ [Shewanella pealeana ATCC 700345]
gi|157847388|gb|ABV87887.1| Tol-Pal system TolQ [Shewanella pealeana ATCC 700345]
Length = 229
Score = 133 bits (334), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/219 (35%), Positives = 120/219 (54%), Gaps = 5/219 (2%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
DIS LF+Q L VK ++ L SI SW+VIIQ+ +++ +FE FWSG L
Sbjct: 4 DISFIGLFLQASLLVKLVMLTLLGLSIASWAVIIQRRRLLNAAKKEALKFEDKFWSGVDL 63
Query: 70 ETVCKSL--KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + L + N GL+++F++ E+ + R P + D R M V+++RELE+
Sbjct: 64 NKLYQELSARQDSNSGLSSLFVTGFKEYARLSKLNGRVPEAVMDGSYRAMRVSLSRELEK 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI--PGIIESLISILLG 185
+ L L ++ S +G+ G V G+M F ++ G N +++ PGI E+LI+ +G
Sbjct: 124 LETHLPLLATIGSTSPYIGLFGTVWGIMNSFIAL-GAVENATLAMVAPGIAEALIATAMG 182
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
L +IP+ IAYN+F +K M F EFS+IL RQ
Sbjct: 183 LFAAIPAVIAYNRFSTQVEKVEMSYANFMEEFSSILHRQ 221
>gi|152980246|ref|YP_001354154.1| biopolymer transport protein [Janthinobacterium sp. Marseille]
gi|151280323|gb|ABR88733.1| biopolymer transport protein [Janthinobacterium sp. Marseille]
Length = 230
Score = 132 bits (333), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 79/227 (34%), Positives = 121/227 (53%), Gaps = 12/227 (5%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S L + V+ ++ LL S++SW+ I +K R Q EFE+ FWSG L
Sbjct: 6 DLSFVHLITNASVLVQLVMALLLGVSVMSWTYIFRKMFAIKNARAQTEEFERAFWSGGDL 65
Query: 70 ETV-----CKSLKNHHNIG-LAAIFMSAMSEWKKSCDKGARSPIGIQDRID---RMMDVA 120
T+ KN+ + G L IF + MSE+ K+ KG+ + R+D R M A
Sbjct: 66 NTLYLEASSNRRKNNGSTGALERIFEAGMSEFNKA--KGSNDSFHVSARLDGARRAMRAA 123
Query: 121 IARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESL 179
RE++ + L+FL S+ S VG+ G V G+M F+ +A + ++ PGI E+L
Sbjct: 124 YQREMDALESHLAFLASVGSVSPYVGLFGTVWGIMNAFRGLANVQQATLAAVAPGIAEAL 183
Query: 180 ISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
I+ +GL +IP+ +AYN++ D + A++ E F EFS IL RQT
Sbjct: 184 IATAIGLFAAIPAVVAYNRYSHDIDRLAIRFESFVEEFSNILQRQTR 230
>gi|226938987|ref|YP_002794058.1| TolQ [Laribacter hongkongensis HLHK9]
gi|226713911|gb|ACO73049.1| TolQ [Laribacter hongkongensis HLHK9]
Length = 225
Score = 132 bits (333), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 75/220 (34%), Positives = 117/220 (53%), Gaps = 2/220 (0%)
Query: 7 AIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG 66
A +S+ L + L V+ I+ LL S+LSW+ I+ K+V T RR +FE+ FWSG
Sbjct: 3 ATQSLSVVQLILDASLPVQLIMALLVAMSVLSWTRILTKAVEVRTARRHTEDFERAFWSG 62
Query: 67 QSLETVCKSLKNHHN-IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
L + + + + IG+ IF S +E+ K + I D R M A REL
Sbjct: 63 TDLNHIYQQVSAKPDGIGMEKIFQSGFAEFLKLRRQPGGELSDIMDGTRRAMKAAAQREL 122
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILL 184
+++ SFL ++ S +G+ G V G+M F + + + ++ PGI E+LI+ +
Sbjct: 123 DDLDRHTSFLATVGSVSPYIGLFGTVWGIMHAFIGLGNAGNATLATVAPGIAEALIATAI 182
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
GL +IP+ +AYN+F D +FA + + F EFS IL RQ
Sbjct: 183 GLFAAIPAVVAYNRFAYDIDRFATRFDTFMEEFSNILQRQ 222
>gi|260772524|ref|ZP_05881440.1| MotA/TolQ/ExbB proton channel family protein [Vibrio metschnikovii
CIP 69.14]
gi|260611663|gb|EEX36866.1| MotA/TolQ/ExbB proton channel family protein [Vibrio metschnikovii
CIP 69.14]
Length = 227
Score = 132 bits (333), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 74/218 (33%), Positives = 114/218 (52%), Gaps = 3/218 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
DIS+ LF+Q L VK ++ +L S+ SW+VII++ RQ EFE FWSG L
Sbjct: 4 DISMLDLFLQASLLVKLVMLILLAMSVASWAVIIKRHKALAQAERQAEEFEDKFWSGTDL 63
Query: 70 ETVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + +K + G IF S +E+ + A +P I + R M V +ARE++E
Sbjct: 64 SILYQEVKKRKDTLEGTEEIFYSGFTEFARLHKSNANAPDYIMEGTGRTMRVTVAREVDE 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ L FL ++ S +G+ G V G+M F ++ + + PGI E+L++ +GL
Sbjct: 124 LEAHLPFLATVGSITPYIGLFGTVWGIMHAFIALGAVKQATLAMVAPGIAEALVATAMGL 183
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+IP+ IAYN+F K F+ EF +IL RQ
Sbjct: 184 FAAIPAVIAYNRFSSKVTKLEHIYATFSEEFHSILHRQ 221
>gi|120599222|ref|YP_963796.1| MotA/TolQ/ExbB proton channel [Shewanella sp. W3-18-1]
gi|146292704|ref|YP_001183128.1| MotA/TolQ/ExbB proton channel [Shewanella putrefaciens CN-32]
gi|120559315|gb|ABM25242.1| MotA/TolQ/ExbB proton channel [Shewanella sp. W3-18-1]
gi|145564394|gb|ABP75329.1| MotA/TolQ/ExbB proton channel [Shewanella putrefaciens CN-32]
gi|319426008|gb|ADV54082.1| TonB system biopolymer transport inner membrane component, TolQ
[Shewanella putrefaciens 200]
Length = 228
Score = 132 bits (332), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 75/218 (34%), Positives = 119/218 (54%), Gaps = 4/218 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+SI LF+Q L VK ++ L S++SW+VI+Q+ + + + +FE FWSG L
Sbjct: 4 DMSIVGLFLQASLLVKFVMFTLLALSVMSWTVILQRRSLLSSAKGKSAKFEDKFWSGVDL 63
Query: 70 ETVCKSLK-NHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ K L N GL ++F++ E+ + ++ P + D R M V ++RE+E++
Sbjct: 64 NRLYKELSARPDNTGLESLFVTGFKEYSRLNKLNSKVPDAVMDGTSRAMRVTLSREMEKL 123
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI--PGIIESLISILLGL 186
L L ++ S +G+ G V G+M F +I G N +++ PGI E+LI+ +GL
Sbjct: 124 EANLPLLATIGSTSPYIGLFGTVWGIMNSFIAI-GSMENATLAMVAPGIAEALIATAMGL 182
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+IP+ IAYN+F K M F EFS+IL RQ
Sbjct: 183 FAAIPAVIAYNRFSTQVDKLEMAYANFMEEFSSILHRQ 220
>gi|300704853|ref|YP_003746456.1| protein tolq, essential components of the tol-pal system [Ralstonia
solanacearum CFBP2957]
gi|299072517|emb|CBJ43867.1| Protein tolQ, essential components of the Tol-Pal system [Ralstonia
solanacearum CFBP2957]
Length = 230
Score = 132 bits (332), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 75/229 (32%), Positives = 120/229 (52%), Gaps = 5/229 (2%)
Query: 3 NYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQL 62
N D+SI +L + L V+ ++ LL + S+ SW+ I +K+ R Q FE+
Sbjct: 2 NPAEVTQDLSIVSLVLHASLLVQFVMGLLLVMSLFSWTYIFRKAFALRAARSQTESFERD 61
Query: 63 FWSGQSLETVCKSLKN--HHNIGLAAIFMSAMSEWKKSCD--KGARSPIGIQDRIDRMMD 118
FW+G L+ + +S N H L IF + M E+ K+ + +G P I D R M
Sbjct: 62 FWAGGDLQAMYQSAANNRHRTGALERIFEAGMREFLKTREQQRGIGDPSAILDASRRAMR 121
Query: 119 VAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIE 177
A RE++ + L FL S+ S +G+ G V G+M F+ ++ + ++ PGI E
Sbjct: 122 AAYQREMDSLESHLPFLASVGSVSPYIGLFGTVWGIMNAFRGLSNVQQATLSAVAPGIAE 181
Query: 178 SLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+L++ +GL +IP+ IAYN++ + + A + E F EFS IL RQT
Sbjct: 182 ALVATAIGLFAAIPAVIAYNRYATEMDRLANRFESFMEEFSNILQRQTR 230
>gi|113970706|ref|YP_734499.1| MotA/TolQ/ExbB proton channel [Shewanella sp. MR-4]
gi|113885390|gb|ABI39442.1| MotA/TolQ/ExbB proton channel [Shewanella sp. MR-4]
Length = 228
Score = 132 bits (332), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 75/218 (34%), Positives = 119/218 (54%), Gaps = 4/218 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+SI LF+Q L VK ++ L S++SW+VI+Q+ + + + +FE FWSG L
Sbjct: 4 DMSIVGLFLQASLLVKFVMFTLLCLSVMSWTVILQRRSLLTSAKSKSAKFEDKFWSGVDL 63
Query: 70 ETVCKSLK-NHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ K L N GL ++F++ E+ + + P + D R M V ++RELE++
Sbjct: 64 NRLYKELSARPDNTGLESLFVTGFKEYSRLNKLNNKVPDAVMDGTSRAMRVTLSRELEKL 123
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI--PGIIESLISILLGL 186
L L ++ S +G+ G V G+M F +I G N +++ PGI E+LI+ +GL
Sbjct: 124 EANLPLLATIGSTSPYIGLFGTVWGIMNSFIAI-GSMENATLAMVAPGIAEALIATAMGL 182
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+IP+ IAYN+F +K + F EFS+IL RQ
Sbjct: 183 FAAIPAVIAYNRFATQVEKLEIGYANFMEEFSSILHRQ 220
>gi|126173972|ref|YP_001050121.1| MotA/TolQ/ExbB proton channel [Shewanella baltica OS155]
gi|125997177|gb|ABN61252.1| MotA/TolQ/ExbB proton channel [Shewanella baltica OS155]
Length = 228
Score = 132 bits (331), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 74/218 (33%), Positives = 118/218 (54%), Gaps = 4/218 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+SI LF+Q L VK ++ L S++SW+VI+Q+ + + + +FE FWSG L
Sbjct: 4 DMSIVGLFLQASLLVKFVMFTLLCLSVMSWTVILQRRSLLTSAKSKSAKFEDKFWSGVDL 63
Query: 70 ETVCKSLKNH-HNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ K L N GL ++F++ E+ + ++ P + D R M V ++RE+E++
Sbjct: 64 NRLYKELSTRPDNSGLESLFVTGFKEYSRLNKLNSKVPDAVMDGTSRAMRVTLSREMEKL 123
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI--PGIIESLISILLGL 186
L ++ S +G+ G V G+M F +I G N +++ PGI E+LI+ +GL
Sbjct: 124 EANLPLFATIGSTSPYIGLFGTVWGIMNSFIAI-GSMENATLAMVAPGIAEALIATAMGL 182
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+IP+ IAYN+F K M F EFS+IL RQ
Sbjct: 183 FAAIPAVIAYNRFSTQVDKLEMAYANFMEEFSSILHRQ 220
>gi|167623619|ref|YP_001673913.1| Tol-Pal system TolQ [Shewanella halifaxensis HAW-EB4]
gi|167353641|gb|ABZ76254.1| Tol-Pal system TolQ [Shewanella halifaxensis HAW-EB4]
Length = 229
Score = 132 bits (331), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 78/219 (35%), Positives = 117/219 (53%), Gaps = 5/219 (2%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
DIS LF+Q L VK ++ L SI SW+VIIQ+ + +FE FWSG L
Sbjct: 4 DISFIGLFLQASLLVKFVMLTLLSLSIASWAVIIQRRKLLNAAKNDALKFEDKFWSGVDL 63
Query: 70 ETVCKSL--KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + L + N GL A+F++ E+ + R P + D R M V+++RELE+
Sbjct: 64 NKLYQELSARQDSNTGLEALFVTGFKEYARLNKLNGRVPEAVMDGSYRAMRVSLSRELEK 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI--PGIIESLISILLG 185
+ L L ++ S +G+ G V G+M F ++ G N +++ PGI E+LI+ +G
Sbjct: 124 LETHLPLLATIGSTSPYIGLFGTVWGIMNSFIAL-GAVENATLAMVAPGIAEALIATAMG 182
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
L +IP+ IAYN+F +K M F EFS+IL RQ
Sbjct: 183 LFAAIPAVIAYNRFSTQVEKIEMSYANFMEEFSSILHRQ 221
>gi|295688120|ref|YP_003591813.1| protein TolQ [Caulobacter segnis ATCC 21756]
gi|295430023|gb|ADG09195.1| protein TolQ [Caulobacter segnis ATCC 21756]
Length = 231
Score = 132 bits (331), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 83/226 (36%), Positives = 123/226 (54%), Gaps = 8/226 (3%)
Query: 7 AIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG 66
A + S FALFMQ VK ++ L + S+ SW+VI+ K F L R FE+ G
Sbjct: 6 AAPNFSFFALFMQADWVVKGVMIGLILASLGSWAVILDKLFRFTNLNRAADRFEEQVSGG 65
Query: 67 QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKG--ARSPIGIQDRIDRMMDVAIARE 124
+SLE V + L + +A+ EW+++ + + RIDR++D IARE
Sbjct: 66 RSLEDVAGEAGANPPHALPRMLQAALKEWREAKTRAMTENQTAFLVARIDRILDTMIARE 125
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV---VSIPGIIESLIS 181
++ E L L +++A +G+ G V G+M FQ+IA S N V P I E+L +
Sbjct: 126 TAKVEEGLGSLAIVATASPFIGLFGTVWGIMHAFQNIA--LSKNTSLAVVAPSIAEALFA 183
Query: 182 ILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFS-AILSRQTE 226
+GL +IP+ IAYNKF D+ K+A ++EGFA++ S AI R TE
Sbjct: 184 TAVGLIAAIPAYIAYNKFSTDAGKYAGRLEGFADDLSTAIQRRLTE 229
>gi|254455761|ref|ZP_05069190.1| protein TolQ [Candidatus Pelagibacter sp. HTCC7211]
gi|207082763|gb|EDZ60189.1| protein TolQ [Candidatus Pelagibacter sp. HTCC7211]
Length = 224
Score = 131 bits (330), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 71/213 (33%), Positives = 123/213 (57%), Gaps = 6/213 (2%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D S+ +LF++ + VK +I +L + SI SW+VII+K F + + EFE+ FW+ +S
Sbjct: 17 DFSLLSLFLRADIVVKSVIIILILCSIYSWAVIIEKFRLFKKINKSSEEFEEKFWNSKSA 76
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
E SL +A +F SAM K +S + +R+ M++ + +++ +I
Sbjct: 77 ENFYNSLPTKVEDPMALVFQSAMEGLLKK-----KSKTNLSERMTAMLETGVEKQMTKID 131
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCV 188
+ +FL ++ S +G+ G V G+M FQSIA + ++ + PGI E+L + LGL
Sbjct: 132 KGFTFLATVGSTAPFIGLFGTVWGIMNSFQSIAISRNTSLAIVAPGIAEALFATALGLLA 191
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+IP+ +AYNKF DS+K++ ++E F+ +F I+
Sbjct: 192 AIPAVVAYNKFNTDSQKYSQKLENFSKKFLTII 224
>gi|84516655|ref|ZP_01004014.1| proton transporter TolQ [Loktanella vestfoldensis SKA53]
gi|84509691|gb|EAQ06149.1| proton transporter TolQ [Loktanella vestfoldensis SKA53]
Length = 224
Score = 131 bits (330), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 76/218 (34%), Positives = 124/218 (56%), Gaps = 1/218 (0%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
+ +++ALF + + VK ++ +L + SI W++I+ K++ + R + F++ FWSG+ L
Sbjct: 6 EFTMWALFARATIIVKLVMIMLILASIWCWAIIVDKTIQYRRARTEAEIFDRAFWSGEPL 65
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+ + + + IF + M EW++S + G RIDR MDVAIA+E +
Sbjct: 66 DQLFDQIGPDPDGASEKIFAAGMLEWRRSHRQDGGLIAGATARIDRSMDVAIAKETARLQ 125
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCV 188
+ L+ L ++ S VG+ G V G+M F IA + N+ V PGI E+L++ LGL
Sbjct: 126 KSLAVLATVGSTAPFVGLFGTVWGIMNAFIEIAEAQNTNLAVVAPGIAEALLATGLGLLA 185
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ I YNK DS++ E FA+EF+ ILSRQ +
Sbjct: 186 AIPAVIYYNKLSADSERIVAGYEAFADEFATILSRQLD 223
>gi|157374993|ref|YP_001473593.1| MotA/TolQ/ExbB proton channel [Shewanella sediminis HAW-EB3]
gi|157317367|gb|ABV36465.1| MotA/TolQ/ExbB proton channel [Shewanella sediminis HAW-EB3]
Length = 229
Score = 131 bits (330), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 76/219 (34%), Positives = 117/219 (53%), Gaps = 5/219 (2%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
DIS LF+Q L VK ++ L S++SW+VIIQ+ T ++ +FE FWSG L
Sbjct: 4 DISFIGLFLQASLLVKFVMLTLLSLSVISWAVIIQRRRLLTTAKQSSIKFEDRFWSGVDL 63
Query: 70 ETVCK--SLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ K S + N GL A+F + E+ + + P + D R M V+++RE+E+
Sbjct: 64 NKLYKEISARQDGNEGLEALFHTGFKEYARLSKLNGKVPAAVMDGSYRAMRVSLSREMEK 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI--PGIIESLISILLG 185
+ L L ++ S +G+ G V G+M F ++ G N +++ PGI E+LI+ +G
Sbjct: 124 LETHLPLLATIGSTSPYIGLFGTVWGIMNSFIAL-GAVENATLAMVAPGIAEALIATAMG 182
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
L +IP+ IAYN+F M F EFS+IL RQ
Sbjct: 183 LFAAIPAVIAYNRFTTQVDSIEMSYANFMEEFSSILHRQ 221
>gi|126733596|ref|ZP_01749343.1| proton transporter TolQ [Roseobacter sp. CCS2]
gi|126716462|gb|EBA13326.1| proton transporter TolQ [Roseobacter sp. CCS2]
Length = 224
Score = 131 bits (329), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 79/221 (35%), Positives = 123/221 (55%), Gaps = 1/221 (0%)
Query: 7 AIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG 66
A + +++ALF + + VK ++ +L S+ W+VII K++ + R + F++ FWSG
Sbjct: 3 AAQEFTMWALFARATITVKIVMIMLVAASVWCWAVIIDKTIQYRKARAEADVFDRSFWSG 62
Query: 67 QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
+ L+ + + + IF S M EW++S + G RIDR MDVAIA++
Sbjct: 63 EPLDALFDQIGADPDGQSEKIFASGMLEWRRSHRQDGGLIAGATARIDRSMDVAIAKQAS 122
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLG 185
+ + L L ++ S VG+ G V G+M F IA + N+ V PGI E+L++ LG
Sbjct: 123 SLQKGLPILATVGSTAPFVGLFGTVWGIMNAFIEIAEAQTTNLAVVAPGIAEALLATGLG 182
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
L +IP+ I YNKF DS + E FA+EF+ ILSRQ +
Sbjct: 183 LLAAIPAVIYYNKFSADSDQIVSGYEAFADEFATILSRQLD 223
>gi|24374292|ref|NP_718335.1| MotA/TolQ/ExbB proton channel family protein [Shewanella oneidensis
MR-1]
gi|24348830|gb|AAN55779.1|AE015714_6 MotA/TolQ/ExbB proton channel family protein [Shewanella oneidensis
MR-1]
Length = 228
Score = 131 bits (329), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 75/218 (34%), Positives = 118/218 (54%), Gaps = 4/218 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S LF+Q L VK ++ L SI+SW+VI+Q+ + + +FE FWSG L
Sbjct: 4 DMSFIGLFLQASLLVKFVMFTLLGLSIMSWTVILQRRSLLTGAKNKSAKFEDKFWSGVDL 63
Query: 70 ETVCKSLK-NHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ K L N GL ++F++ E+ + ++ P + D R M V ++RELE++
Sbjct: 64 NRLYKELSARPDNTGLESLFVTGFKEYSRLNKLNSKVPDAVMDGTSRAMRVTLSRELEKL 123
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI--PGIIESLISILLGL 186
L L ++ S +G+ G V G+M F +I G N +++ PGI E+LI+ +GL
Sbjct: 124 EANLPLLATIGSTSPYIGLFGTVWGIMNSFIAI-GSMENATLAMVAPGIAEALIATAMGL 182
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+IP+ IAYN+F +K + F EFS+IL RQ
Sbjct: 183 FAAIPAVIAYNRFATQVEKLEIAYANFMEEFSSILHRQ 220
>gi|149202849|ref|ZP_01879820.1| MotA/TolQ/ExbB proton channel [Roseovarius sp. TM1035]
gi|149143395|gb|EDM31431.1| MotA/TolQ/ExbB proton channel [Roseovarius sp. TM1035]
Length = 231
Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/219 (36%), Positives = 122/219 (55%), Gaps = 1/219 (0%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
+D S++ALF + L VK ++ +L + S +WS+IIQK + + + + F++ FWSG+
Sbjct: 12 IDFSMWALFARATLTVKLVMFMLIVSSFWAWSIIIQKIIIYRKAQLEAEIFDRRFWSGEP 71
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
L+ + + IF + M+EW++S G RIDR MDVAIA+E E +
Sbjct: 72 LDGLFDEIGPEPAGQSERIFAAGMTEWRRSHRNDGNLIAGATARIDRSMDVAIAKESEGL 131
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
L L ++ S +G+ G V G+M F IA + N+ V PGI E+L++ LGL
Sbjct: 132 QSGLQVLATVGSTAPFIGLFGTVWGIMHAFVEIAEQQNTNLAVVAPGIAEALLATGLGLI 191
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ I YNK D+ + E FA+EF+ ILSRQ +
Sbjct: 192 AAIPAVIFYNKLSADADRIVAGYEAFADEFATILSRQLD 230
>gi|294140558|ref|YP_003556536.1| MotA/TolQ/ExbB proton channel family protein [Shewanella violacea
DSS12]
gi|293327027|dbj|BAJ01758.1| MotA/TolQ/ExbB proton channel family protein [Shewanella violacea
DSS12]
Length = 229
Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 75/219 (34%), Positives = 117/219 (53%), Gaps = 5/219 (2%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
DISI LF+Q L VK ++ L S++SW+VI Q+ T ++ +FE FWSG L
Sbjct: 4 DISIIGLFLQASLLVKFVMLTLLSLSVMSWAVIFQRHRLLNTAKKNALKFEDQFWSGVDL 63
Query: 70 ETVCKSL--KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ K L + N GL +F + E+ + ++ P + D R M V+++RE+E+
Sbjct: 64 NKLYKELSARQDSNTGLEILFHTGFKEYTRLSKLNSKVPGAVMDGSYRAMRVSLSREMEK 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI--PGIIESLISILLG 185
+ L L ++ S +G+ G V G+M F ++ G N +++ PGI E+LI+ +G
Sbjct: 124 LETHLPLLATIGSTSPYIGLFGTVWGIMNSFIAL-GAVQNATLAMVAPGIAEALIATAMG 182
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
L +IP+ IAYN+F M F EFS+IL RQ
Sbjct: 183 LFAAIPAVIAYNRFTTQVDSVEMSYANFMEEFSSILHRQ 221
>gi|90022177|ref|YP_528004.1| peptidase A8, signal peptidase II [Saccharophagus degradans 2-40]
gi|89951777|gb|ABD81792.1| MotA/TolQ/ExbB proton channel [Saccharophagus degradans 2-40]
Length = 231
Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 126/219 (57%), Gaps = 5/219 (2%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+SI++L +Q + V+ ++ +LF+ S++SW +I+Q+ + + +++FE+ FWSG L
Sbjct: 6 LSIWSLIVQASVLVQIVMAILFLLSVVSWGLIVQRGLYQYHAKVAYKDFERQFWSGVDLT 65
Query: 71 TVCKSLKNHHNI----GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
+ + + N G+ IF + E+ + +G+ P I + R M VA+ARE E
Sbjct: 66 QLYRQGNSKANRSATDGVENIFRAGFKEFTRLRQQGSTDPDAIMEGTQRTMRVAMAREEE 125
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLG 185
++ L FL S++S +G+ G V G+M F+ +A + + PGI E+L++ +G
Sbjct: 126 KLEVFLPFLASVASVSPYIGLFGTVWGIMNSFRGLATESQATLALVAPGISEALVATAMG 185
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
L +IP+ +AYN+F +++ + E FA EFSAIL RQ
Sbjct: 186 LFAAIPAVLAYNRFSSNAESLISRYETFAEEFSAILHRQ 224
>gi|124268138|ref|YP_001022142.1| transmembrane protein/ biopolymer transport [Methylibium
petroleiphilum PM1]
gi|124260913|gb|ABM95907.1| transmembrane protein/ biopolymer transport [Methylibium
petroleiphilum PM1]
Length = 227
Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 78/217 (35%), Positives = 115/217 (52%), Gaps = 3/217 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+SIF L + L V+ +I L S+ SW+VI K +R FE+ FWSGQ+L
Sbjct: 5 DLSIFQLVLHASLVVQLVIVALLAMSLASWTVIFGKLFGLKRVRALNEGFERDFWSGQNL 64
Query: 70 ETV-CKSLKNHHNIG-LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + + K G + IF S M E+ K ++ P + D R M + REL+
Sbjct: 65 QDLYADAAKKADRSGPMTRIFASGMREFMKLRERRVADPGALLDGSRRAMRASFQRELDT 124
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ LSFL S+ S VG+ G V G+M F +A + ++ PGI E+L++ +GL
Sbjct: 125 VESHLSFLASVGSVSPYVGLFGTVWGIMHAFTGLANLQQVTLATVAPGIAEALVATAIGL 184
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
+IP+ +AYN+F D + A+QME F EFS IL R
Sbjct: 185 FAAIPAVLAYNRFARDIDRIAIQMETFIEEFSNILQR 221
>gi|254436624|ref|ZP_05050118.1| protein TolQ [Octadecabacter antarcticus 307]
gi|198252070|gb|EDY76384.1| protein TolQ [Octadecabacter antarcticus 307]
Length = 248
Score = 130 bits (327), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 77/222 (34%), Positives = 121/222 (54%), Gaps = 3/222 (1%)
Query: 7 AIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG 66
A D +++ALF + + V+ ++ +L SI W+V I K+V + R + F++ FWSG
Sbjct: 27 AAQDFTMWALFTRATILVQLVMIMLVAASIWCWAVFIDKTVQYRKARAEADAFDRSFWSG 86
Query: 67 QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSC-DKGARSPIGIQDRIDRMMDVAIAREL 125
+ L+ + + IF S M EW++S + G P RI+ MDV IA++
Sbjct: 87 EPLDALFGKIGAEPQGSTEKIFASGMLEWRRSHREDGGLIPDSTA-RINTSMDVTIAKQS 145
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILL 184
++ + L L ++ S VG+ G V G+M F I+ + N+ V PGI E+L+S +
Sbjct: 146 SKLQKGLPILATVGSTAPFVGLFGTVWGIMNAFIEISQAQTTNLAVVAPGIAEALMSTGI 205
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
GL +IP+ I YNK DS++ E FA+EF+ ILSRQ E
Sbjct: 206 GLLAAIPAVIIYNKLSTDSEQIVSGYEAFADEFANILSRQVE 247
>gi|17545451|ref|NP_518853.1| TOLQ-like transport transmembrane protein [Ralstonia solanacearum
GMI1000]
gi|17427743|emb|CAD14262.1| probable tolq-related transport transmembrane protein [Ralstonia
solanacearum GMI1000]
gi|299067722|emb|CBJ38931.1| Protein tolQ, essential components of the Tol-Pal system [Ralstonia
solanacearum CMR15]
Length = 230
Score = 130 bits (327), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 75/222 (33%), Positives = 120/222 (54%), Gaps = 5/222 (2%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+SI +L + L V+ ++ LL + S+ SW+ I +K+ R Q FE+ FW+G L
Sbjct: 9 DLSIVSLVLHASLLVQFVMGLLLVMSLFSWTYIFRKAFALRAARAQTESFERDFWAGGDL 68
Query: 70 ETVCKSLKN--HHNIGLAAIFMSAMSEWKKSCD--KGARSPIGIQDRIDRMMDVAIAREL 125
+ + +S N HH L IF + M E+ K+ + +G P I D R M A RE+
Sbjct: 69 QAMYQSAANNRHHTGALERIFEAGMREYLKTREQQRGVGDPSAILDAARRAMRAAYQREM 128
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILL 184
+ + L FL S+ S +G+ G V G+M F+ ++ + ++ PGI E+L++ +
Sbjct: 129 DSLESHLPFLASVGSVSPYIGLFGTVWGIMNAFRGLSNVQQATLSAVAPGIAEALVATAI 188
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
GL +IP+ IAYN++ + + A + E F EFS IL RQT
Sbjct: 189 GLFAAIPAVIAYNRYATEMDRLANRFESFMEEFSNILQRQTR 230
>gi|256823068|ref|YP_003147031.1| protein TolQ [Kangiella koreensis DSM 16069]
gi|256796607|gb|ACV27263.1| protein TolQ [Kangiella koreensis DSM 16069]
Length = 237
Score = 130 bits (326), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 117/220 (53%), Gaps = 3/220 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
+SI LF+ + V+ I+ LL + S++SW++I Q+S + R+ ++FE FWSG L
Sbjct: 17 PMSIANLFLHASIPVQAIMVLLLVISVISWAMIFQRSSVLNSASRESKKFEDRFWSGIDL 76
Query: 70 ETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ L GL ++F + E+ + + SP + D R M VA +RE+E+
Sbjct: 77 GKLSTDLSQRQKPVTGLESLFQAGYREFMRLRQQSGVSPEAVMDGTHRAMRVAHSREVEK 136
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ LSFL ++ S +G+ G V G+M F ++ + + PGI E+LI+ +GL
Sbjct: 137 LERNLSFLATVGSVTPYIGLFGTVWGIMNSFIALGAVKQATLAMVAPGIAEALIATAMGL 196
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ IAYN+F ++ Q E F EFS +L R+
Sbjct: 197 FAAIPAVIAYNRFTNRLQRIETQYENFLEEFSGVLHRKAH 236
>gi|114776331|ref|ZP_01451376.1| MotA/TolQ/ExbB proton channel family protein [Mariprofundus
ferrooxydans PV-1]
gi|114553161|gb|EAU55559.1| MotA/TolQ/ExbB proton channel family protein [Mariprofundus
ferrooxydans PV-1]
Length = 229
Score = 130 bits (326), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 125/225 (55%), Gaps = 8/225 (3%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+SI L + G+ V+ ++ +L + S++SW++I K + RR+ F Q FW G +
Sbjct: 4 DLSILHLILNAGVIVQGVLIMLIMLSLMSWAIIFNKWRLYRKTRREAELFSQSFWGGTDM 63
Query: 70 ETVCKSLKNHH-NIGLAAIFMSAMSEW---KKSCDKGARSPI---GIQDRIDRMMDVAIA 122
+TV + + + L IF + E+ ++ + + I G D + R +D A +
Sbjct: 64 DTVLAGIPQQYPDSSLPNIFQAGYREFLRLRRDASQSHTAKITAGGGIDGVRRSLDAAFS 123
Query: 123 RELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLIS 181
RE+E+++ L+FL ++ S +G+ G V G++ FQSIA + + S+ PGI E+L++
Sbjct: 124 REIEKLSRHLAFLATVGSTSPFIGLFGTVWGIVNAFQSIAMTKNTALTSVAPGIAEALVA 183
Query: 182 ILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
GL +IP+ +AYNKF D K+ ME F++EF I++R +
Sbjct: 184 TAFGLVAAIPAVVAYNKFTADLKRMGANMEQFSSEFLNIIARHVK 228
>gi|212634654|ref|YP_002311179.1| MotA/TolQ/ExbB proton channel [Shewanella piezotolerans WP3]
gi|212556138|gb|ACJ28592.1| MotA/TolQ/ExbB proton channel [Shewanella piezotolerans WP3]
Length = 229
Score = 130 bits (326), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 76/219 (34%), Positives = 117/219 (53%), Gaps = 5/219 (2%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
DIS LF+Q L VK ++ L SI SW+VI+Q+ + + +FE FWSG L
Sbjct: 4 DISFIGLFLQASLLVKFVMLTLLSLSIASWAVILQRRKLLTAAKTEALKFEDKFWSGVDL 63
Query: 70 ETVCKSL--KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + L + GL A+F++ E+ + R P + D R M V+++RELE+
Sbjct: 64 NKLYQELSARQDRTSGLEALFVTGFKEYARLNKLNGRVPEAVMDGSYRAMRVSLSRELEK 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI--PGIIESLISILLG 185
+ L L ++ S +G+ G V G+M F ++ G N +++ PGI E+LI+ +G
Sbjct: 124 LETHLPLLATIGSTSPYIGLFGTVWGIMNSFIAL-GAVENATLAMVAPGIAEALIATAMG 182
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
L +IP+ IAYN+F +K M F EFS+IL RQ
Sbjct: 183 LFAAIPAVIAYNRFSTQVEKIEMSYANFMEEFSSILHRQ 221
>gi|89094840|ref|ZP_01167773.1| TolQ protein [Oceanospirillum sp. MED92]
gi|89080895|gb|EAR60134.1| TolQ protein [Oceanospirillum sp. MED92]
Length = 226
Score = 129 bits (325), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 120/221 (54%), Gaps = 3/221 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+SI++L + V+ ++ +L + S++SW +I Q+ + R+ R FE FWSG L
Sbjct: 5 MSIWSLVANASVVVQLVMLMLLMASVISWVMIFQRQAVLSSARKSLRNFEDRFWSGVDLG 64
Query: 71 TVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ + + + N G IF + + E+ + + P + D I R M VA+ARE +++
Sbjct: 65 QLFREINHEPNSDCGAENIFRAGIKEYTRLTQQPGYDPDSVMDGIQRSMRVALAREEDKL 124
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLC 187
L FL ++ S +G+ G V G+M F+ +A + + S+ PGI E+LI+ +GL
Sbjct: 125 ERHLPFLATVGSTSPYIGLFGTVWGIMNSFRGLANVHQATLASVAPGISEALIATAIGLF 184
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
+IP+ IAYN++ + E FA+EFS+IL R+ +
Sbjct: 185 AAIPAVIAYNRYSAQVEYLLGNYETFADEFSSILHRRMHAS 225
>gi|307944542|ref|ZP_07659882.1| protein TolQ [Roseibium sp. TrichSKD4]
gi|307772291|gb|EFO31512.1| protein TolQ [Roseibium sp. TrichSKD4]
Length = 139
Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 71/140 (50%), Positives = 92/140 (65%), Gaps = 3/140 (2%)
Query: 92 MSEWKKSCDKGARSPIG-IQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGA 150
M EWK+S + GAR I +Q RIDR+MDV I RE E + +L L S+ SAG +G+ G
Sbjct: 1 MREWKRSHE-GARPAIASLQQRIDRVMDVTIQREAERLESRLLILASVGSAGPFIGLFGT 59
Query: 151 VLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQ 209
V G+M FQ+IA S N+ V PGI E+L + LGL +IP+ IAYNKF D K +
Sbjct: 60 VWGIMTAFQAIANAESTNLAVVAPGIAEALFATALGLLAAIPAVIAYNKFSSDVGKVVGR 119
Query: 210 MEGFANEFSAILSRQTEGNI 229
MEGFA+EFSAILSRQ + ++
Sbjct: 120 MEGFADEFSAILSRQIDQSV 139
>gi|157825551|ref|YP_001493271.1| TolQ protein [Rickettsia akari str. Hartford]
gi|157799509|gb|ABV74763.1| TolQ protein [Rickettsia akari str. Hartford]
Length = 241
Score = 129 bits (324), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 79/219 (36%), Positives = 127/219 (57%), Gaps = 3/219 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+S+FAL + K ++ +L I SI SW++I+ K ++R+ ++FE +FWSG LE
Sbjct: 19 LSLFALINSSDIIGKSVMLMLLITSIWSWAIILDKIFKLAQVQRRMKDFENVFWSGGVLE 78
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPI--GIQDRIDRMMDVAIARELEEI 128
+ S+K N LA IF+SAM E K KG + ++RI M +A RE+E++
Sbjct: 79 QLYDSIKRSVNNPLALIFVSAMDECKSLSTKGLSDALKNNHKERITGAMYLAQNREVEKL 138
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
+ LSFL ++ S+ VG+ G V G+M FQSIA + ++ V PGI E+L++ +GL
Sbjct: 139 EKNLSFLATVGSSAPFVGLFGTVWGIMHSFQSIATSKNTSLAVVAPGIAEALLATAIGLF 198
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ I YN I ++E F++E ++ILS+ +
Sbjct: 199 AAIPAVIFYNYLISRITLINNKIEDFSSELNSILSKAID 237
>gi|322514839|ref|ZP_08067858.1| TolQ colicin import protein [Actinobacillus ureae ATCC 25976]
gi|322119221|gb|EFX91362.1| TolQ colicin import protein [Actinobacillus ureae ATCC 25976]
Length = 226
Score = 129 bits (324), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 73/218 (33%), Positives = 116/218 (53%), Gaps = 3/218 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D ++ +LFMQ + VK +I +L FSILSW+VIIQ+S ++ FE FWSG+ L
Sbjct: 4 DFNLVSLFMQASIVVKIVILILITFSILSWAVIIQRSRVLTAAKKDALAFENKFWSGEDL 63
Query: 70 ETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + L+N + G IF + E+ + A +P R M++A+ RE+E
Sbjct: 64 HRLHEGLENRRDGLSGSEQIFYAGFKEYMRLQQVNADAPEATMKGSSRAMNLALNREIEN 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ + FLG++ S +G+ G V G+M F ++ + S+ PGI E+LI+ +GL
Sbjct: 124 LESYIPFLGTVGSISPYIGLFGTVWGIMHSFMGLSAVKQATLQSVAPGIAEALIATAIGL 183
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+IP+ +AYN+ K F +EF+ IL RQ
Sbjct: 184 FAAIPAVMAYNRLSLRVNKLEQDYANFIDEFTTILHRQ 221
>gi|312796777|ref|YP_004029699.1| TolQ protein [Burkholderia rhizoxinica HKI 454]
gi|312168552|emb|CBW75555.1| TolQ protein [Burkholderia rhizoxinica HKI 454]
Length = 225
Score = 129 bits (324), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 82/229 (35%), Positives = 126/229 (55%), Gaps = 7/229 (3%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
MNN D+SI AL + L + ++ LL + S++SW+ I +K + R Q FE
Sbjct: 1 MNN----AQDLSIIALVLNASLLAQAVMALLLLLSLMSWTFIFRKWFSIRRARAQTELFE 56
Query: 61 QLFWSGQSLETVCKSL-KNHHNIG-LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMD 118
+ FWSG L+++ +S N H IG L IF S M E+ K+ +K P I D R M
Sbjct: 57 RDFWSGGELQSLYQSAANNRHTIGALERIFESGMREFLKAKEKRVADPGAILDGARRAMR 116
Query: 119 VAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIE 177
A RE++ + L+FL S+ S +G+ G V G+M F+ +A + S+ PGI E
Sbjct: 117 AAFQREMDALEANLAFLASVGSVSPYIGLFGTVWGIMNAFRGLANVQQATLASVAPGIAE 176
Query: 178 SLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+L++ +GL +IP+ +AYN++ D + +++ E F EFS IL RQT
Sbjct: 177 ALVATAIGLFAAIPAVVAYNRYAHDIDRLSIRFETFIEEFSNILQRQTH 225
>gi|237748802|ref|ZP_04579282.1| TolQ [Oxalobacter formigenes OXCC13]
gi|229380164|gb|EEO30255.1| TolQ [Oxalobacter formigenes OXCC13]
Length = 228
Score = 129 bits (324), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 73/223 (32%), Positives = 120/223 (53%), Gaps = 6/223 (2%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S +L L V+ I+ LL + S++SW+ I QK + R + FE FWSG +L
Sbjct: 6 DLSFISLISNASLLVQLIMALLVVVSLMSWTFIFQKMFAIKSARTETVSFEHAFWSGGNL 65
Query: 70 ETVCKSLKNHHNIG-LAAIFMSAMSEWKKSCD----KGARSPIGIQDRIDRMMDVAIARE 124
+ + + ++ G L IF + M E+ K + A+ + + D R M A RE
Sbjct: 66 QNLYQRAGSNSKTGALERIFHAGMGEYIKGKNAISGHTAQDTVAVLDGARRAMRAAYQRE 125
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISIL 183
++ + L+FL S+ S VG+ G V G+M F+ +A + + ++ PGI E+LI+
Sbjct: 126 MDSLESHLAFLASVGSVSPYVGLFGTVWGIMNAFRGLANVHQATLATVAPGIAEALIATA 185
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+GL +IP+ +AYN+F D + +++ E F EFS IL RQ+
Sbjct: 186 IGLFAAIPAVVAYNRFSHDIDRLSIRFETFIEEFSNILQRQSR 228
>gi|260431111|ref|ZP_05785082.1| protein TolQ [Silicibacter lacuscaerulensis ITI-1157]
gi|260414939|gb|EEX08198.1| protein TolQ [Silicibacter lacuscaerulensis ITI-1157]
Length = 231
Score = 129 bits (324), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 82/219 (37%), Positives = 123/219 (56%), Gaps = 1/219 (0%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
+D S++ LF + VK ++ +L + S SWS+IIQ+ +N+ RR+ F+Q FWSG
Sbjct: 12 IDFSMWGLFARATFIVKVVMLMLVVASFWSWSIIIQRLINYRAARREAEAFDQAFWSGNP 71
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
L+ + + + + IF + M EW++S G RIDR MDVAIA+E E++
Sbjct: 72 LDELFEQIGPQPDGASEKIFAAGMIEWRRSHRNDGGLIAGATARIDRSMDVAIAKEAEKL 131
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
+ L L ++ S +G+ G V G+M F IA + N+ V PGI E+L++ LGL
Sbjct: 132 KKGLPILATVGSTAPFIGLFGTVWGIMNAFIEIAEQQNTNLAVVAPGIAEALLATGLGLL 191
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ I YNK DS E FA+EF+ ILSRQ +
Sbjct: 192 AAIPAVIFYNKLSADSDHIIGGYEAFADEFATILSRQLD 230
>gi|264679474|ref|YP_003279381.1| MotA/TolQ/ExbB proton channel [Comamonas testosteroni CNB-2]
gi|299530556|ref|ZP_07043976.1| MotA/TolQ/ExbB proton channel [Comamonas testosteroni S44]
gi|262209987|gb|ACY34085.1| MotA/TolQ/ExbB proton channel [Comamonas testosteroni CNB-2]
gi|298721532|gb|EFI62469.1| MotA/TolQ/ExbB proton channel [Comamonas testosteroni S44]
Length = 234
Score = 129 bits (323), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 77/217 (35%), Positives = 114/217 (52%), Gaps = 3/217 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+SI +L MQ V+ ++ +L I SI SW+ I +K+ +R FEQ FWSG SL
Sbjct: 5 DMSILSLIMQASWVVQLVMLILVIASIASWATIFRKAQTLKRVRSLNDNFEQDFWSGTSL 64
Query: 70 ETVCKSLKNHHNIG--LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ S + G + IF S M E++K ++ + D R M + REL+E
Sbjct: 65 NDLYASAAQNAKTGGPMERIFASGMREYQKLRERRIGDVATLMDGTRRAMRASFQRELDE 124
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
I LSFLG+++S VG+ G V G+M F A + ++ PGI E+L++ +GL
Sbjct: 125 IESGLSFLGTVASVSPYVGLFGTVWGVMHAFTGFANMEQITLATVAPGIAEALVATAMGL 184
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
+IP+ AYN++ + A Q E F EFS IL R
Sbjct: 185 FAAIPAVTAYNRYAHHIDRIASQEETFIEEFSNILQR 221
>gi|217969216|ref|YP_002354450.1| protein TolQ [Thauera sp. MZ1T]
gi|217506543|gb|ACK53554.1| protein TolQ [Thauera sp. MZ1T]
Length = 222
Score = 129 bits (323), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 72/215 (33%), Positives = 116/215 (53%), Gaps = 2/215 (0%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+SI +L Q + V+ ++ LL S++SW I +K+ R Q EFE+ FWSG L
Sbjct: 6 DLSILSLISQASVLVQLVMALLASLSLVSWYWIFRKAFQIRQARAQTDEFERDFWSGGDL 65
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
T+ +S H + G+ IF + E+ K KG + D R M RE++++
Sbjct: 66 NTLYESAGRHQSEGMERIFEAGYREFTKLRGKGHDHGATL-DGARRAMRATYQREIDDLE 124
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCV 188
L+FL S+ S +G+LG V G+M F+ ++ + + + PGI E+L++ +GL
Sbjct: 125 AHLAFLASVGSVSPYIGLLGTVWGIMNSFRGLSSVGAATLAQVAPGIAEALVATAIGLFA 184
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
+IP+ +AYN+F D + ++ E F EFS IL R
Sbjct: 185 AIPAVVAYNRFAHDIDRLGIRFESFMEEFSNILQR 219
>gi|159043657|ref|YP_001532451.1| Tol-Pal system TolQ [Dinoroseobacter shibae DFL 12]
gi|157911417|gb|ABV92850.1| Tol-Pal system TolQ [Dinoroseobacter shibae DFL 12]
Length = 224
Score = 128 bits (322), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 83/220 (37%), Positives = 124/220 (56%), Gaps = 3/220 (1%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
+D S ALF + L V+ ++ LL S SWS+IIQK + F R + F+ FWSG
Sbjct: 5 IDFSFLALFARATLTVQLVMILLIGMSFWSWSIIIQKWITFRKARAEAEAFDAAFWSGDP 64
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSC-DKGARSPIGIQDRIDRMMDVAIARELEE 127
L+ + + + +F S M+EW++S D G P G Q RIDR MDVAIA++ E
Sbjct: 65 LDDLFDEIGPTPDGAAQRVFASGMTEWRRSHRDTGDLIP-GAQQRIDRSMDVAIAKQSER 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
+ L+FL + + +G+ G V G+ F+ IA + N+ V PGI E+L++ LGL
Sbjct: 124 LQNGLNFLATTGATAPFIGLFGTVWGIKHSFEQIAIQQNTNLAVVAPGIAEALLATGLGL 183
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ +AYNK D+ + E FA+EF+ +LSRQ +
Sbjct: 184 LAAIPAVVAYNKLSADADRIVGGYEAFADEFATLLSRQLD 223
>gi|163751260|ref|ZP_02158488.1| MotA/TolQ/ExbB proton channel family protein [Shewanella benthica
KT99]
gi|161328974|gb|EDQ00048.1| MotA/TolQ/ExbB proton channel family protein [Shewanella benthica
KT99]
Length = 229
Score = 128 bits (322), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 74/219 (33%), Positives = 118/219 (53%), Gaps = 5/219 (2%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
DISI LF+Q + VK ++ L S++SW+VIIQ+S ++ +FE FWSG L
Sbjct: 4 DISIIGLFLQASILVKFVMLTLLGLSVMSWAVIIQRSRLLSAAKKNVLKFEDKFWSGVDL 63
Query: 70 ETVCK--SLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ K S++ N GL +F + E+ + ++ P + + R M V+++RE+E+
Sbjct: 64 NKLYKELSVRQDSNTGLETLFHTGFKEYARLSKLNSKVPDAVMNGSYRAMRVSLSREMEK 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI--PGIIESLISILLG 185
+ L L ++ S +G+ G V G+M F +I G N +++ PGI E+LI+ +G
Sbjct: 124 LETHLPLLATIGSTSPYIGLFGTVWGIMNSFIAI-GAVENATLAMVAPGIAEALIATAMG 182
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
L +IP+ I YN+F M F EFS+IL RQ
Sbjct: 183 LFAAIPAVIGYNRFTTLVDSVEMSYANFMEEFSSILHRQ 221
>gi|120610901|ref|YP_970579.1| MotA/TolQ/ExbB proton channel [Acidovorax citrulli AAC00-1]
gi|326317712|ref|YP_004235384.1| protein TolQ [Acidovorax avenae subsp. avenae ATCC 19860]
gi|120589365|gb|ABM32805.1| Cell division and transport-associated protein TolQ [Acidovorax
citrulli AAC00-1]
gi|323374548|gb|ADX46817.1| protein TolQ [Acidovorax avenae subsp. avenae ATCC 19860]
Length = 233
Score = 128 bits (322), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 78/218 (35%), Positives = 115/218 (52%), Gaps = 3/218 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+SI L + V+ ++ LL SI SW+ I +K +R EFE+ FWSG SL
Sbjct: 5 DMSILHLVLNASWVVQLVMALLIGVSIASWAAIFRKLFALKRVRSLNDEFEREFWSGTSL 64
Query: 70 ETVCKSL-KNHHNIG-LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ S +N N G + IF S M E+ K ++ P + D R M + RE++
Sbjct: 65 NDLYASAAQNAKNAGPMERIFASGMREFHKLRERRITDPGTLLDGARRAMRASFQREMDV 124
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ LSFLGS++S VG+ G V G+M F AG + ++ PGI E+L++ +GL
Sbjct: 125 VESSLSFLGSVASVSPYVGLFGTVWGIMHAFTGFAGMEQVTLATVAPGIAEALVATAIGL 184
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+IP+ +AYN+F D + A+ E F EFS IL R
Sbjct: 185 FAAIPAVVAYNRFARDIDRVAIHQETFIEEFSNILQRN 222
>gi|221065983|ref|ZP_03542088.1| protein TolQ [Comamonas testosteroni KF-1]
gi|220711006|gb|EED66374.1| protein TolQ [Comamonas testosteroni KF-1]
Length = 234
Score = 128 bits (322), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 77/217 (35%), Positives = 114/217 (52%), Gaps = 3/217 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+SI +L MQ V+ ++ +L I SI SW+ I +K+ +R FEQ FWSG SL
Sbjct: 5 DMSILSLIMQASWVVQLVMLILVIASIASWATIFRKAQTLKRVRTLNDNFEQDFWSGTSL 64
Query: 70 ETVCKSLKNHHNIG--LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ S + G + IF S M E++K ++ + D R M + REL+E
Sbjct: 65 NDLYASAAQNAKTGGPMERIFASGMREYQKLRERRIGDVATLLDGTRRAMRASFQRELDE 124
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
I LSFLG+++S VG+ G V G+M F A + ++ PGI E+L++ +GL
Sbjct: 125 IESGLSFLGTVASVSPYVGLFGTVWGVMHAFTGFANMEQITLATVAPGIAEALVATAMGL 184
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
+IP+ AYN++ + A Q E F EFS IL R
Sbjct: 185 FAAIPAVTAYNRYAHHIDRIASQEETFIEEFSNILQR 221
>gi|56697944|ref|YP_168315.1| proton transporter TolQ [Ruegeria pomeroyi DSS-3]
gi|56679681|gb|AAV96347.1| proton transporter TolQ [Ruegeria pomeroyi DSS-3]
Length = 231
Score = 128 bits (321), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 87/228 (38%), Positives = 126/228 (55%), Gaps = 4/228 (1%)
Query: 1 MNNYGLAI---MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFR 57
M LA+ +D S++ LF + L VK ++ LL + S +W++IIQK + + RR+
Sbjct: 1 METEALALAQEIDFSMWGLFARATLTVKLVMLLLVLASFWAWAIIIQKHILYRATRREAD 60
Query: 58 EFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMM 117
F+Q FWSG+ L+ + + + IF + M EW++S G Q RIDR M
Sbjct: 61 RFDQSFWSGEPLDELFEQIGAQPEGSSEKIFAAGMVEWRRSHRNDGGLIAGAQARIDRSM 120
Query: 118 DVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGII 176
DVAIA+E E + L L ++ S VG+ G V G+M F IA + N+ V PGI
Sbjct: 121 DVAIAKEAEGLQRGLPVLATVGSTAPFVGLFGTVWGIMTAFIEIAEQQNTNLAVVAPGIA 180
Query: 177 ESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
E+L++ LGL +IP+ I YNK DS + E FA+EF+ ILSRQ
Sbjct: 181 EALLATGLGLLAAIPAVIFYNKLSADSDRIVAGYEAFADEFATILSRQ 228
>gi|121998993|ref|YP_001003780.1| MotA/TolQ/ExbB proton channel [Halorhodospira halophila SL1]
gi|121590398|gb|ABM62978.1| Cell division and transport-associated protein TolQ [Halorhodospira
halophila SL1]
Length = 232
Score = 128 bits (321), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 118/222 (53%), Gaps = 4/222 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S+ L + L V+ ++ L + S+ SW++I+ K + + FE+ FW+G +L
Sbjct: 4 DVSVLRLILDASLLVQAVMLSLILASVTSWALILSKRLTLKRAEQTAIRFEEEFWAGGNL 63
Query: 70 ETVCKSLKNH---HNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
+ + L + + G+ IF + E+ + + P + + R M V+++REL+
Sbjct: 64 AEIYRRLSDEGPGEHAGMERIFRAGFQEFSRMRKQSGAPPSAVVEAAHRAMRVSVSRELD 123
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLG 185
L FL ++ S VG+ G V G+M F+++AG + ++ PGI E+LI+ LG
Sbjct: 124 NAERHLQFLATVGSVSPYVGLFGTVWGIMNSFRALAGQQQATLATVAPGIAEALIATALG 183
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEG 227
L +IP+ IAYN + +++ A + E F EF++IL R T
Sbjct: 184 LFAAIPAVIAYNHYANRAERLANRYETFVEEFTSILERHTHA 225
>gi|90417113|ref|ZP_01225041.1| tolQ protein [marine gamma proteobacterium HTCC2207]
gi|90331129|gb|EAS46385.1| tolQ protein [marine gamma proteobacterium HTCC2207]
Length = 232
Score = 128 bits (321), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 76/225 (33%), Positives = 122/225 (54%), Gaps = 6/225 (2%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
++SI+ L + V+ ++ LLF+ SI+SW +I+Q+ + +R FR+FE FWSG L
Sbjct: 8 NMSIWHLISNASVLVQLVMGLLFVASIMSWVMIVQRGIFLNAAQRGFRQFEDAFWSGVDL 67
Query: 70 ETVCKSL----KNH-HNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARE 124
+ L K H G+ +F + E+ + G+ I + DR M VA++RE
Sbjct: 68 NKLYGELTQEAKEHGGRDGVENVFRAGFREFNRLAQVGSADSDTIMEGTDRAMRVALSRE 127
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISIL 183
E++ L FL S++S +G+ G V G+M F+ +A + ++ PGI E+LI+
Sbjct: 128 DEKLNISLPFLASVASVSPYIGLFGTVWGIMNSFRGLAMVQQATLATVAPGISEALIATA 187
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
+GL +IP+ IAYN++ + E FA EFS+IL RQ N
Sbjct: 188 MGLFAAIPALIAYNRYAAIVETMNSSYETFAEEFSSILHRQIRAN 232
>gi|238026340|ref|YP_002910571.1| MotA/TolQ/ExbB proton channel [Burkholderia glumae BGR1]
gi|237875534|gb|ACR27867.1| MotA/TolQ/ExbB proton channel [Burkholderia glumae BGR1]
Length = 225
Score = 128 bits (321), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 76/220 (34%), Positives = 121/220 (55%), Gaps = 3/220 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+SI +L + + + ++ LL + S++SW+ I +K RRQ FE+ FWSG L
Sbjct: 6 DLSIVSLVLNASVLAQAVMGLLLLLSLMSWTFIFRKWFALRRARRQTERFERDFWSGGDL 65
Query: 70 ETVCKSL-KNHHNIG-LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + +S N H IG L IF S M E+ K+ +K P I D R M A RE++
Sbjct: 66 QALYQSAANNRHTIGSLERIFESGMREFLKAKEKRISDPSLILDGARRAMRAAFQREMDM 125
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ L+FL S+ S +G+ G V G+M F+ +A + ++ PGI E+L++ +GL
Sbjct: 126 LEANLAFLASVGSVSPYIGLFGTVWGIMNSFRGLANVQQATLANVAPGIAEALVATAIGL 185
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ +AYN++ + + A + E F EFS IL RQ +
Sbjct: 186 FAAIPAVVAYNRYAHEIDRLASRFETFVEEFSNILQRQAQ 225
>gi|134095581|ref|YP_001100656.1| inner membrane protein [Herminiimonas arsenicoxydans]
gi|133739484|emb|CAL62535.1| Protein TolQ [Herminiimonas arsenicoxydans]
Length = 230
Score = 127 bits (320), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 76/227 (33%), Positives = 117/227 (51%), Gaps = 12/227 (5%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S L + V+ ++ LL S++SW+ I +K R Q EFE+ FWSG L
Sbjct: 6 DLSFVHLIANASVLVQLVMALLVGVSVMSWTYIFRKMFAIKNARTQTEEFERAFWSGGDL 65
Query: 70 ETVCKSLKNHHNI------GLAAIFMSAMSEWKKSCDKGARSPIGIQDRID---RMMDVA 120
+ + ++ L IF + MSE+ KS + + P R+D R M A
Sbjct: 66 NALYQDATSNRRKSSGSTGALERIFEAGMSEFNKS--RASHDPSQASVRLDGARRAMRAA 123
Query: 121 IARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESL 179
RE++ + L+FL S+ S VG+ G V G+M F+ +A + ++ PGI E+L
Sbjct: 124 YQREMDGLESHLAFLASVGSVSPYVGLFGTVWGIMNSFRGLANVQQATLAAVAPGIAEAL 183
Query: 180 ISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
I+ +GL +IP+ +AYN++ D + AM+ E F EFS IL RQT
Sbjct: 184 IATAIGLFAAIPAVVAYNRYSHDIDRLAMRFESFVEEFSNILQRQTR 230
>gi|260222862|emb|CBA32854.1| Protein tolQ [Curvibacter putative symbiont of Hydra
magnipapillata]
Length = 242
Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 74/217 (34%), Positives = 117/217 (53%), Gaps = 3/217 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+SI L + + V+ ++ LL + SI SW+ I +K + ++ Q FE+ FWSG SL
Sbjct: 15 DLSILHLVLNASIVVQAVMALLMMVSIASWAAIFRKLFSLKRVKTQNEAFEREFWSGSSL 74
Query: 70 ETVCKSL-KNHHNIG-LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + +N G + IF S M E++K ++ + D R M + RE++E
Sbjct: 75 NDLFNAASRNAQTCGPMERIFASGMREFQKLRERRVSDVGTLMDGARRAMRASFQREMDE 134
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ LSFL S+ S VG+ G V G+M F +A + ++ PGI E+L++ +GL
Sbjct: 135 VESNLSFLASVGSVSPYVGLFGTVWGIMHAFTGLASLQQVTLSTVAPGIAEALVATAIGL 194
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
+IP+ +AYN+F D + A+Q E F EFS IL R
Sbjct: 195 FAAIPAVVAYNRFARDLDRIAIQQETFIEEFSNILQR 231
>gi|71083299|ref|YP_266018.1| inner membrane protein TolQ [Candidatus Pelagibacter ubique
HTCC1062]
gi|71062412|gb|AAZ21415.1| inner membrane protein TolQ [Candidatus Pelagibacter ubique
HTCC1062]
Length = 224
Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/213 (34%), Positives = 121/213 (56%), Gaps = 6/213 (2%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D S+++LF++ VK +I +L SI SW+VII+K F + + EFE+ FW +S
Sbjct: 17 DFSLWSLFLRADFIVKSVILMLIGCSIYSWAVIIEKFRLFKKINLESEEFEEKFWKSKSA 76
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
E+ SL A +F M K A+S + +RI +++V I +++ +I
Sbjct: 77 ESFYNSLPADVENPTALLFKDTMQSLLK-----AKSKTNLNERIASILEVNIEKQISKID 131
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCV 188
+ +FL ++ S +G+ G V G+M FQSIA + ++ + PGI E+L + LGL
Sbjct: 132 KGFTFLATVGSTAPFIGLFGTVWGIMNSFQSIAISRNTSLAIVAPGIAEALFATALGLLA 191
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+IP+ +AYNKF DSKK++ ++E F+ F +I+
Sbjct: 192 AIPAVVAYNKFNNDSKKYSQRLENFSKRFLSII 224
>gi|332525522|ref|ZP_08401679.1| transmembrane protein/ biopolymer transport [Rubrivivax
benzoatilyticus JA2]
gi|332109089|gb|EGJ10012.1| transmembrane protein/ biopolymer transport [Rubrivivax
benzoatilyticus JA2]
Length = 227
Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/221 (35%), Positives = 119/221 (53%), Gaps = 5/221 (2%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+SI +L +Q V+ ++ L + S+ SW+VI K T+R + FE+ FWSG+SL
Sbjct: 4 DLSIVSLVLQASAVVQLVMAGLALVSLASWTVIFGKLFGLRTVRSRNEAFEREFWSGRSL 63
Query: 70 ETVCKSLKNHHNIG-LAAIFMSAMSEWKKSCDKGARSPIGIQ-DRIDRMMDVAIARELEE 127
+ ++ N + + IF S M E+ K ++ R G Q D R M + REL+
Sbjct: 64 TELNQAASNKADAAPIERIFASGMREFLKLRER--RLDAGAQLDGARRAMRASFQRELDA 121
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
I LSFL S+ S VG+ G V G+M F ++ + ++ PGI E+L++ +GL
Sbjct: 122 IESHLSFLASVGSVSPYVGLFGTVWGIMHAFVGLSNLQQVTLATVAPGIAEALVATAIGL 181
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEG 227
+IP+ IAYN+F D + A+Q E F EFS IL R G
Sbjct: 182 FAAIPAVIAYNRFARDIDRIAIQFETFIEEFSNILQRNASG 222
>gi|330815671|ref|YP_004359376.1| tolQ protein [Burkholderia gladioli BSR3]
gi|327368064|gb|AEA59420.1| tolQ protein [Burkholderia gladioli BSR3]
Length = 225
Score = 126 bits (317), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/220 (34%), Positives = 121/220 (55%), Gaps = 3/220 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+SI +L + + + ++ LL + S++SW+ I +K R+Q FE+ FWSG L
Sbjct: 6 DLSIVSLVLNASVLAQAVMGLLLLLSLMSWTFIFRKWFAIRRARKQTERFERDFWSGGDL 65
Query: 70 ETVCKSL-KNHHNIG-LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + +S N H IG L IF S M E+ K+ +K P I D R M + RE++
Sbjct: 66 QALYQSAANNRHTIGSLERIFESGMREFLKAKEKRISDPSLILDGARRAMRASFQREMDM 125
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ L+FL S+ S +G+ G V G+M F+ +A + ++ PGI E+L++ +GL
Sbjct: 126 LEANLAFLASVGSVSPYIGLFGTVWGIMNSFRGLANVQQATLANVAPGIAEALVATAIGL 185
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ +AYN++ D + A + E F EFS IL RQ +
Sbjct: 186 FAAIPAVVAYNRYAHDIDRLASRFETFVEEFSNILQRQAQ 225
>gi|220935400|ref|YP_002514299.1| TolQ protein [Thioalkalivibrio sp. HL-EbGR7]
gi|219996710|gb|ACL73312.1| TolQ protein [Thioalkalivibrio sp. HL-EbGR7]
Length = 228
Score = 126 bits (317), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/226 (31%), Positives = 123/226 (54%), Gaps = 10/226 (4%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
+D+S++ L ++ V+ ++ +L + S+LSW+V+I K R EFE+ FWSG
Sbjct: 3 VDLSLYRLILEASFIVQLVMLILVVMSVLSWTVMIIKWRVLRDTRAATDEFEERFWSGVD 62
Query: 69 LETVCKSLKNHHNI-GLAAIFMSAMSEW----KKSCDKGARSPIGIQDRIDRMMDVAIAR 123
L + + ++ + GL +FM+ E+ K D+GA + + R M VA++R
Sbjct: 63 LAHLYEGIRRKSEVTGLEHVFMAGFKEFLRGRKHRSDRGA----TLGESAQRSMRVAVSR 118
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISI 182
E++ + LSFL ++ S +G+ G V G+M F ++G + + PGI E+LI+
Sbjct: 119 EVDGLESYLSFLATVGSTSPYIGLFGTVWGIMHAFIGLSGAQQATLAMVAPGIAEALIAT 178
Query: 183 LLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
LGL +IP+ IAYN+F +D + + + F EF+++L RQ
Sbjct: 179 ALGLFAAIPAVIAYNRFSDDVDRIVTRYDNFTEEFTSLLQRQAPAT 224
>gi|83647599|ref|YP_436034.1| biopolymer transport protein [Hahella chejuensis KCTC 2396]
gi|83635642|gb|ABC31609.1| Biopolymer transport protein [Hahella chejuensis KCTC 2396]
Length = 227
Score = 126 bits (317), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/223 (32%), Positives = 119/223 (53%), Gaps = 3/223 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+SI+AL V+ ++ +L SI+SW +I Q++ F RR +FE+ FWSG L
Sbjct: 5 LSIWALISNASFLVQIVMLILLAASIVSWMIIFQRARIFGLARRATTKFEERFWSGMDLN 64
Query: 71 TVCK--SLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ + S + N G+ IF S E+ + + P + + R M VA++RE++ +
Sbjct: 65 QLYRESSAAPNPNSGMEQIFRSGFKEFSRLRQQAGVDPDAVMEGTQRSMRVAMSREMDRL 124
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLC 187
L FL ++ S +G+ G V G+M F+ +A + ++ PGI E+LI+ +GL
Sbjct: 125 EAHLPFLATVGSTTPYIGLFGTVWGIMNSFRGLAHLQQATISTVAPGISEALIATAMGLF 184
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
+IP+ IAYN++ S+ A + FA EFS+IL R+ S
Sbjct: 185 AAIPAVIAYNRYSARSESLANSFQTFAEEFSSILHRRVHAKSS 227
>gi|73540496|ref|YP_295016.1| MotA/TolQ/ExbB proton channel [Ralstonia eutropha JMP134]
gi|72117909|gb|AAZ60172.1| MotA/TolQ/ExbB proton channel [Ralstonia eutropha JMP134]
Length = 227
Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 121/220 (55%), Gaps = 4/220 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+SI +L + L + ++ LL + S+ SW+ I +K + + R Q FE+ FW+G L
Sbjct: 9 DLSIISLVLHASLLAQAVMALLLVMSLFSWTYIFRKHLALRSARTQTEGFERDFWAGGDL 68
Query: 70 ETVCKS-LKNHHNIG-LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + S + N HN G L IF S M E+ K+ ++G + + D R M A RE++
Sbjct: 69 QALYNSAVNNRHNTGALERIFESGMGEFLKARERGNEAS-ALLDAARRAMRAAYQREMDV 127
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ L FL S+ S +G+ G V G+M F+ ++ + S+ PGI E+L++ +GL
Sbjct: 128 LESHLPFLASVGSVSPYIGLFGTVWGIMNAFRGLSNVQQATLASVAPGIAEALVATAIGL 187
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ IAYN++ + + A++ E F EF IL RQT
Sbjct: 188 FAAIPAVIAYNRYATEIDRLAIRFESFMEEFLNILQRQTR 227
>gi|307256328|ref|ZP_07538111.1| hypothetical protein appser10_3350 [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
gi|306865154|gb|EFM97054.1| hypothetical protein appser10_3350 [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
Length = 226
Score = 126 bits (316), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 71/218 (32%), Positives = 116/218 (53%), Gaps = 3/218 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
+ ++ +LFMQ + VK +I +L FSILSW+VIIQ+S ++ FE FWSG+ L
Sbjct: 4 EFNLISLFMQASIVVKIVILILISFSILSWAVIIQRSRVLTEAKKNALAFENKFWSGEDL 63
Query: 70 ETVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + L+N + G IF + E+ + +P R M++A+ RE+E
Sbjct: 64 HRLHEGLENRRDALNGSEQIFYAGFKEYMRLQQVNPDAPEATMKGSSRAMNLALNREVEN 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ + FLG++ S +G+ G V G+M F ++ + S+ PGI E+LI+ +GL
Sbjct: 124 LESYIPFLGTVGSISPYIGLFGTVWGIMHSFMGLSAVKQATLQSVAPGIAEALIATAIGL 183
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+IP+ +AYN+ K + F +EF+ IL RQ
Sbjct: 184 FAAIPAVMAYNRLSLRVNKLEQEYANFIDEFTTILHRQ 221
>gi|167648385|ref|YP_001686048.1| protein TolQ [Caulobacter sp. K31]
gi|167350815|gb|ABZ73550.1| protein TolQ [Caulobacter sp. K31]
Length = 232
Score = 125 bits (315), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 79/220 (35%), Positives = 119/220 (54%), Gaps = 10/220 (4%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLET 71
S +LF+Q VK ++ L + S+ SW+VII K F + FE +GQ LE
Sbjct: 11 SFISLFLQADWVVKGVMVGLILASLGSWAVIIDKLFRFSAMNSAANRFEDQVSAGQGLEE 70
Query: 72 VCKSLKNHHNIGLAAIFMSAMSEWKKSCDKG----ARSPIGIQDRIDRMMDVAIARELEE 127
V + L + +A+ EW+++ KG A++ IQ RIDRM+D IARE +
Sbjct: 71 VAAQAGPNPRHPLPRMLQTALKEWREAKAKGVVGEAQAAFLIQ-RIDRMLDTLIARETGK 129
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV---VSIPGIIESLISILL 184
E L L +++A +G+ G V G+M FQ+IA S N V P I E+L + +
Sbjct: 130 AEEGLGSLAIVATASPFIGLFGTVWGIMHAFQNIA--ISKNTSLAVVAPSIAEALFATAI 187
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
GL +IP+ IAYNKF D+ K+A ++E FA++ S + R+
Sbjct: 188 GLIAAIPAYIAYNKFSTDAGKYAGRLENFADDLSTAIQRR 227
>gi|254787338|ref|YP_003074767.1| protein TolQ [Teredinibacter turnerae T7901]
gi|237685839|gb|ACR13103.1| protein TolQ [Teredinibacter turnerae T7901]
Length = 229
Score = 125 bits (315), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 73/219 (33%), Positives = 123/219 (56%), Gaps = 5/219 (2%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+SI L + L V+ ++ LLF+ S +SW +I+Q+ + R+ FREFE FWSG L
Sbjct: 6 LSILNLVLNASLLVQLVMLLLFMASAVSWVMIVQRGMYQGRARQAFREFESQFWSGIDLT 65
Query: 71 TVCKS----LKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
+ + H G+ IF + E+ + +G+ P I + R M VA +RE E
Sbjct: 66 QLYRQGNSGANKHSTDGIENIFRAGFKEFTRLRQQGSTDPDAIMEGTQRAMRVAHSREEE 125
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLG 185
++ L FL S++S +G+ G V G+M F+ +A + + ++ PGI E+L++ +G
Sbjct: 126 KLEANLPFLASVASVSPYIGLFGTVWGIMNSFRGLANVHQATLATVAPGISEALVATAMG 185
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
L +IP+ +AYN+F ++++ + + FA EFS+IL RQ
Sbjct: 186 LFAAIPAVLAYNRFSANAEQLTGKYQTFAEEFSSILHRQ 224
>gi|190149573|ref|YP_001968098.1| colicin transporter TolQ [Actinobacillus pleuropneumoniae serovar 7
str. AP76]
gi|303249540|ref|ZP_07335747.1| colicin transport protein [Actinobacillus pleuropneumoniae serovar
6 str. Femo]
gi|303252542|ref|ZP_07338705.1| colicin transport protein [Actinobacillus pleuropneumoniae serovar
2 str. 4226]
gi|307247292|ref|ZP_07529340.1| hypothetical protein appser2_2890 [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
gi|307251831|ref|ZP_07533733.1| hypothetical protein appser6_3520 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|307260767|ref|ZP_07542454.1| hypothetical protein appser12_3390 [Actinobacillus pleuropneumoniae
serovar 12 str. 1096]
gi|307262893|ref|ZP_07544517.1| hypothetical protein appser13_3180 [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
gi|189914704|gb|ACE60956.1| colicin transport protein TolQ [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
gi|302648510|gb|EFL78703.1| colicin transport protein [Actinobacillus pleuropneumoniae serovar
2 str. 4226]
gi|302651614|gb|EFL81763.1| colicin transport protein [Actinobacillus pleuropneumoniae serovar
6 str. Femo]
gi|306856136|gb|EFM88291.1| hypothetical protein appser2_2890 [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
gi|306860738|gb|EFM92749.1| hypothetical protein appser6_3520 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|306869493|gb|EFN01283.1| hypothetical protein appser12_3390 [Actinobacillus pleuropneumoniae
serovar 12 str. 1096]
gi|306871798|gb|EFN03518.1| hypothetical protein appser13_3180 [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
Length = 226
Score = 125 bits (315), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 71/218 (32%), Positives = 116/218 (53%), Gaps = 3/218 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
+ ++ +LFMQ + VK +I +L FSILSW+VIIQ+S ++ FE FWSG+ L
Sbjct: 4 EFNLVSLFMQASIVVKIVILILISFSILSWAVIIQRSRVLTEAKKNALAFENKFWSGEDL 63
Query: 70 ETVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + L+N + G IF + E+ + +P R M++A+ RE+E
Sbjct: 64 HRLHEGLENRRDALNGSEQIFYAGFKEYMRLQQVNPDAPEATMKGSSRAMNLALNREVEN 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ + FLG++ S +G+ G V G+M F ++ + S+ PGI E+LI+ +GL
Sbjct: 124 LESYIPFLGTVGSISPYIGLFGTVWGIMHSFMGLSAVKQATLQSVAPGIAEALIATAIGL 183
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+IP+ +AYN+ K + F +EF+ IL RQ
Sbjct: 184 FAAIPAVMAYNRLSLRVNKLEQEYANFIDEFTTILHRQ 221
>gi|157803962|ref|YP_001492511.1| hypothetical protein A1E_03995 [Rickettsia canadensis str. McKiel]
gi|157785225|gb|ABV73726.1| hypothetical protein A1E_03995 [Rickettsia canadensis str. McKiel]
Length = 242
Score = 125 bits (315), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 76/205 (37%), Positives = 121/205 (59%), Gaps = 3/205 (1%)
Query: 25 KCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGL 84
K ++ +LFI SI SW++I+ K + ++R+ R FE +FWSG+ LE + S+K N L
Sbjct: 34 KSVMLILFIASIWSWAIILNKIFKLMQVQRRMRAFENVFWSGRVLEQLYDSIKRSVNNPL 93
Query: 85 AAIFMSAMSEWKKSCDKGARSPI--GIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAG 142
A IF+SAM E K KG + + RI +M +A RE+E++ + LSFL ++ S+
Sbjct: 94 ALIFVSAMDECKSLNSKGLSDALKNNHKGRITGVMYLAQNREIEKLEKNLSFLATVGSSS 153
Query: 143 LLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIE 201
+G+ G V G+M FQSIA + ++ V PGI E+L++ +GL +IP+ I YN I
Sbjct: 154 PFIGLFGTVWGIMHSFQSIATSKNTSLAVVAPGIAEALLATAIGLFAAIPAVIFYNYLIS 213
Query: 202 DSKKFAMQMEGFANEFSAILSRQTE 226
++E F +E ++ILS+ +
Sbjct: 214 RIILINNKIEDFISELNSILSKAID 238
>gi|91762271|ref|ZP_01264236.1| inner membrane protein TolQ [Candidatus Pelagibacter ubique
HTCC1002]
gi|91718073|gb|EAS84723.1| inner membrane protein TolQ [Candidatus Pelagibacter ubique
HTCC1002]
Length = 224
Score = 125 bits (315), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 72/213 (33%), Positives = 121/213 (56%), Gaps = 6/213 (2%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D S+++LF++ VK +I +L SI SW+VII+K F + + EFE+ FW +S
Sbjct: 17 DFSLWSLFLRADFIVKSVILMLIGCSIYSWAVIIEKFRLFKKINLESEEFEEKFWKSKSA 76
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
E+ SL A +F M K A+S + +R+ +++V I +++ +I
Sbjct: 77 ESFYNSLPADVENPTALLFKDTMQSLLK-----AKSKTNLNERMASILEVNIEKQISKID 131
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCV 188
+ +FL ++ S +G+ G V G+M FQSIA + ++ + PGI E+L + LGL
Sbjct: 132 KGFTFLATVGSTAPFIGLFGTVWGIMNSFQSIAISRNTSLAIVAPGIAEALFATALGLLA 191
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+IP+ +AYNKF DSKK++ ++E F+ F +I+
Sbjct: 192 AIPAVVAYNKFNNDSKKYSQRLENFSKRFLSII 224
>gi|107021878|ref|YP_620205.1| MotA/TolQ/ExbB proton channel [Burkholderia cenocepacia AU 1054]
gi|116688826|ref|YP_834449.1| MotA/TolQ/ExbB proton channel [Burkholderia cenocepacia HI2424]
gi|170732125|ref|YP_001764072.1| protein TolQ [Burkholderia cenocepacia MC0-3]
gi|254246217|ref|ZP_04939538.1| MotA/TolQ/ExbB proton channel [Burkholderia cenocepacia PC184]
gi|105892067|gb|ABF75232.1| Cell division and transport-associated protein TolQ [Burkholderia
cenocepacia AU 1054]
gi|116646915|gb|ABK07556.1| Cell division and transport-associated protein TolQ [Burkholderia
cenocepacia HI2424]
gi|124870993|gb|EAY62709.1| MotA/TolQ/ExbB proton channel [Burkholderia cenocepacia PC184]
gi|169815367|gb|ACA89950.1| protein TolQ [Burkholderia cenocepacia MC0-3]
Length = 225
Score = 125 bits (315), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 74/222 (33%), Positives = 122/222 (54%), Gaps = 3/222 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
+ D+SI +L + + + ++ LL + S++SW+ I +K R Q FE+ FWSG
Sbjct: 4 VQDLSIISLVLNASVLAQAVMGLLLLLSLMSWTFIFRKWFAIRRARAQTERFEKDFWSGG 63
Query: 68 SLETVCKSL-KNHHNIG-LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
L+ + +S N H IG L IF S M E+ K+ +K P + D R M + RE+
Sbjct: 64 DLQALYQSAANNRHTIGALERIFESGMREFLKAKEKRLSDPGLVLDGARRAMRASFQREM 123
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILL 184
+ + L+FL S+ S +G+ G V G+M F+ +A + ++ PGI E+L++ +
Sbjct: 124 DVLEANLAFLASVGSVSPYIGLFGTVWGIMNSFRGLANVQQATLANVAPGIAEALVATAI 183
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
GL +IP+ +AYN++ D + A++ E F EFS IL RQ +
Sbjct: 184 GLFAAIPAVVAYNRYAHDIDRLAIRFETFIEEFSNILQRQAQ 225
>gi|167855028|ref|ZP_02477802.1| colicin transport protein TolQ [Haemophilus parasuis 29755]
gi|167853876|gb|EDS25116.1| colicin transport protein TolQ [Haemophilus parasuis 29755]
Length = 226
Score = 125 bits (314), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 72/218 (33%), Positives = 116/218 (53%), Gaps = 3/218 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
+ ++ +LFM+ + VK +I +L FS+LSW+VIIQ+S ++ FE FWSG+ L
Sbjct: 4 EFNLVSLFMEASIVVKLVILILISFSVLSWAVIIQRSRVLTRAKKDSLNFEDRFWSGEDL 63
Query: 70 ETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + L++ + G IF E+ + SP I R M++A+ RELEE
Sbjct: 64 HRLHEGLEHRRDGLTGAEHIFYVGFKEFNRLQQANPDSPESIIQGSSRAMNLALNRELEE 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ + FLG++ S +G+ G V G+M F ++ + S+ PGI E+LI+ +GL
Sbjct: 124 LENYIPFLGTVGSISPYIGLFGTVWGIMHSFMGLSAVKQATLQSVAPGIAEALIATAIGL 183
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+IP+ +AYN+ K F +EF+ IL RQ
Sbjct: 184 FAAIPAVMAYNRLNLRVGKLEQNYVNFIDEFTTILHRQ 221
>gi|94311610|ref|YP_584820.1| MotA/TolQ/ExbB proton channel [Cupriavidus metallidurans CH34]
gi|93355462|gb|ABF09551.1| membrane spanning protein in TolA-TolQ-TolR complex [Cupriavidus
metallidurans CH34]
gi|222874295|gb|EEF11426.1| predicted protein [Populus trichocarpa]
Length = 227
Score = 125 bits (314), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 120/220 (54%), Gaps = 4/220 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+SI +L + L + ++ LL + S+ SW+ I +K + R Q FE+ FW+G L
Sbjct: 9 DLSIISLVLHASLLAQAVMALLLVMSLFSWTYIFRKHLALRAARTQTEGFERDFWAGGDL 68
Query: 70 ETVCKS-LKNHHNIG-LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + S + N HN G L IF S M E+ K+ ++G + + D R M A RE++
Sbjct: 69 QALYNSAVNNRHNTGALERIFESGMGEFLKARERGNEAG-ALLDAARRAMRAAYQREMDV 127
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ L FL S+ S +G+ G V G+M F+ ++ + S+ PGI E+L++ +GL
Sbjct: 128 LESHLPFLASVGSVSPYIGLFGTVWGIMNAFRGLSNVQQATLASVAPGIAEALVATAIGL 187
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ IAYN++ + + A++ E F EF IL RQT
Sbjct: 188 FAAIPAVIAYNRYATEIDRLAIRFESFMEEFLNILQRQTR 227
>gi|114562636|ref|YP_750149.1| MotA/TolQ/ExbB proton channel [Shewanella frigidimarina NCIMB 400]
gi|114333929|gb|ABI71311.1| MotA/TolQ/ExbB proton channel [Shewanella frigidimarina NCIMB 400]
Length = 229
Score = 125 bits (314), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 72/219 (32%), Positives = 118/219 (53%), Gaps = 5/219 (2%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
+IS LF++ + VK ++ L SI SW+VIIQ++ + R + FE+ FWSG L
Sbjct: 4 EISFIGLFLEASVLVKLVMLTLLALSIASWAVIIQRNKLLGSARVKSLRFEETFWSGVDL 63
Query: 70 ETVCKSL--KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ K L + GL ++F++ E+ + +++P + D R M V+++RE+E+
Sbjct: 64 NRLYKELIARGSAISGLESMFVAGFKEYTRLSKVNSKAPEAVMDGTSRAMRVSLSREMEK 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI--PGIIESLISILLG 185
+ L L ++ S +G+ G V G+M F ++ G N +++ PGI E+LI+ +G
Sbjct: 124 LENHLPLLATIGSTSPYIGLFGTVWGIMNSFIAL-GAVENATLAMVAPGIAEALIATAMG 182
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
L +IP+ I YN+F K M F EFS IL RQ
Sbjct: 183 LFAAIPAVIGYNRFTTQVDKIEMTYANFMEEFSNILQRQ 221
>gi|134294847|ref|YP_001118582.1| MotA/TolQ/ExbB proton channel [Burkholderia vietnamiensis G4]
gi|134138004|gb|ABO53747.1| Cell division and transport-associated protein TolQ [Burkholderia
vietnamiensis G4]
Length = 225
Score = 125 bits (314), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 121/220 (55%), Gaps = 3/220 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+SI +L + + + ++ LL + S++SW+ I +K R Q FE+ FWSG L
Sbjct: 6 DLSIISLVLNASVLAQAVMGLLLLLSLMSWTFIFRKWFAIRRARAQTERFEKDFWSGGDL 65
Query: 70 ETVCKSL-KNHHNIG-LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + +S N H IG L IF + M E+ K+ +K P + D R M A RE++
Sbjct: 66 QALYQSAANNRHTIGALERIFEAGMREFLKAKEKRLSDPGLVLDGARRAMRAAFQREMDV 125
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ L+FL S+ S +G+ G V G+M F+ +A + ++ PGI E+L++ +GL
Sbjct: 126 LEANLAFLASVGSVSPYIGLFGTVWGIMNSFRGLANVQQATLANVAPGIAEALVATAIGL 185
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ +AYN++ D + A++ E F EFS IL RQ +
Sbjct: 186 FAAIPAVVAYNRYAHDIDRLAIRFETFIEEFSNILQRQAQ 225
>gi|165975757|ref|YP_001651350.1| colicin transport protein [Actinobacillus pleuropneumoniae serovar
3 str. JL03]
gi|165875858|gb|ABY68906.1| colicin transport protein [Actinobacillus pleuropneumoniae serovar
3 str. JL03]
Length = 226
Score = 125 bits (314), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 71/218 (32%), Positives = 116/218 (53%), Gaps = 3/218 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
+ ++ +LFMQ + VK +I +L FSILSW+VIIQ+S ++ FE FWSG+ L
Sbjct: 4 EFNLVSLFMQASIVVKIVILILISFSILSWAVIIQRSRVLTEAKKNALAFENKFWSGEDL 63
Query: 70 ETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + L+N + G IF + E+ + +P R M++A+ RE+E+
Sbjct: 64 HRLHEGLENRRDGLNGSEQIFYAGFKEYMRLQQVNPDAPEATMKGSSRAMNLALNREVED 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ + FLG++ S +G+ G V G+M F ++ + S+ PGI E+LI+ +GL
Sbjct: 124 LESYIPFLGTVGSISPYIGLFGTVWGIMHSFMGLSAVKQATLQSVAPGIAEALIATAIGL 183
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+IP+ +AYN+ K F +EF+ IL RQ
Sbjct: 184 FAAIPAVMAYNRLSLRVNKLEQDYANFIDEFTTILHRQ 221
>gi|170701070|ref|ZP_02892047.1| protein TolQ [Burkholderia ambifaria IOP40-10]
gi|171322374|ref|ZP_02911195.1| protein TolQ [Burkholderia ambifaria MEX-5]
gi|172059757|ref|YP_001807409.1| protein TolQ [Burkholderia ambifaria MC40-6]
gi|170134010|gb|EDT02361.1| protein TolQ [Burkholderia ambifaria IOP40-10]
gi|171092302|gb|EDT37674.1| protein TolQ [Burkholderia ambifaria MEX-5]
gi|171992274|gb|ACB63193.1| protein TolQ [Burkholderia ambifaria MC40-6]
Length = 225
Score = 125 bits (313), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 121/220 (55%), Gaps = 3/220 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+SI +L + + + ++ LL + S++SW+ I +K R Q FE+ FWSG L
Sbjct: 6 DLSIISLVLNASVLAQAVMGLLLLLSLMSWTFIFRKWFAIRRARAQTERFERDFWSGGDL 65
Query: 70 ETVCKSL-KNHHNIG-LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + +S N H IG L IF S M E+ K+ +K P + D R M + RE++
Sbjct: 66 QALYQSAANNRHTIGALERIFESGMREFLKAKEKRLTDPGLVLDGARRAMRASFQREMDV 125
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ L+FL S+ S +G+ G V G+M F+ +A + ++ PGI E+L++ +GL
Sbjct: 126 LEANLAFLASVGSVSPYIGLFGTVWGIMNSFRGLANVQQATLANVAPGIAEALVATAIGL 185
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ +AYN++ D + A++ E F EFS IL RQ +
Sbjct: 186 FAAIPAVVAYNRYAHDIDRLAIRFETFIEEFSNILQRQAQ 225
>gi|161525753|ref|YP_001580765.1| protein TolQ [Burkholderia multivorans ATCC 17616]
gi|189349525|ref|YP_001945153.1| biopolymer transport protein [Burkholderia multivorans ATCC 17616]
gi|221201009|ref|ZP_03574049.1| protein TolQ [Burkholderia multivorans CGD2M]
gi|221206539|ref|ZP_03579552.1| protein TolQ [Burkholderia multivorans CGD2]
gi|221214393|ref|ZP_03587364.1| protein TolQ [Burkholderia multivorans CGD1]
gi|160343182|gb|ABX16268.1| protein TolQ [Burkholderia multivorans ATCC 17616]
gi|189333547|dbj|BAG42617.1| biopolymer transport protein [Burkholderia multivorans ATCC 17616]
gi|221165650|gb|EED98125.1| protein TolQ [Burkholderia multivorans CGD1]
gi|221173848|gb|EEE06282.1| protein TolQ [Burkholderia multivorans CGD2]
gi|221178859|gb|EEE11266.1| protein TolQ [Burkholderia multivorans CGD2M]
Length = 225
Score = 125 bits (313), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 121/220 (55%), Gaps = 3/220 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+SI +L + + + ++ LL + S++SW+ I +K R Q FE+ FWSG L
Sbjct: 6 DLSIISLVLNASVLAQAVMGLLLLLSLMSWTFIFRKWFAIRRARAQTERFERDFWSGGDL 65
Query: 70 ETVCKSL-KNHHNIG-LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + +S N H IG L IF S M E+ K+ +K P + D R M + RE++
Sbjct: 66 QALYQSAANNRHTIGALERIFESGMREFLKAKEKRLSDPGLVLDGARRAMRASFQREMDV 125
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ L+FL S+ S +G+ G V G+M F+ +A + ++ PGI E+L++ +GL
Sbjct: 126 LESNLAFLASVGSVSPYIGLFGTVWGIMNSFRGLANVQQATLANVAPGIAEALVATAIGL 185
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ +AYN++ D + A++ E F EFS IL RQ +
Sbjct: 186 FAAIPAVVAYNRYAHDIDRLAIRFETFIEEFSNILQRQAQ 225
>gi|91792749|ref|YP_562400.1| MotA/TolQ/ExbB proton channel [Shewanella denitrificans OS217]
gi|91714751|gb|ABE54677.1| MotA/TolQ/ExbB proton channel [Shewanella denitrificans OS217]
Length = 229
Score = 125 bits (313), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 73/219 (33%), Positives = 113/219 (51%), Gaps = 5/219 (2%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
+IS LF++ L VK ++ L SI+SW+VIIQ+ T + + FE FWSG L
Sbjct: 4 EISFIGLFLEASLLVKLVMLTLLGLSIMSWAVIIQRRKLLNTAKAKSARFEDTFWSGVDL 63
Query: 70 ETVCKSL--KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ K L + GL +F++ E+ + + P + D R M V+++RE+E+
Sbjct: 64 NRLYKELVARGDSIAGLECLFVAGFKEYSRLSKSSGKQPDAVMDGTSRAMRVSLSREIEK 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI--PGIIESLISILLG 185
+ L L ++ S +G+ G V G+M F +I G N +++ PGI E+LI+ +G
Sbjct: 124 LENNLPLLATIGSTSPYIGLFGTVWGIMNSFIAI-GTVQNATLAMVAPGIAEALIATAMG 182
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
L +IP+ I YN+F K F EFS IL RQ
Sbjct: 183 LFAAIPAVIGYNRFTTQVDKLETAYVNFMEEFSNILHRQ 221
>gi|254253143|ref|ZP_04946461.1| MotA/TolQ/ExbB proton channel [Burkholderia dolosa AUO158]
gi|124895752|gb|EAY69632.1| MotA/TolQ/ExbB proton channel [Burkholderia dolosa AUO158]
Length = 237
Score = 124 bits (312), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 121/220 (55%), Gaps = 3/220 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+SI +L + + + ++ LL + S++SW+ I +K R Q FE+ FWSG L
Sbjct: 18 DLSIISLVLNASVLAQAVMGLLLLLSLMSWTFIFRKWFAIRRARAQTERFERDFWSGGDL 77
Query: 70 ETVCKSL-KNHHNIG-LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + +S N H IG L IF S M E+ K+ +K P + D R M + RE++
Sbjct: 78 QALYQSAANNRHTIGALERIFESGMREFLKAKEKRLSDPGLVLDGARRAMRASFQREMDV 137
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ L+FL S+ S +G+ G V G+M F+ +A + ++ PGI E+L++ +GL
Sbjct: 138 LESNLAFLASVGSVSPYIGLFGTVWGIMNSFRGLANVQQATLANVAPGIAEALVATAIGL 197
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ +AYN++ D + A++ E F EFS IL RQ +
Sbjct: 198 FAAIPAVVAYNRYAHDIDRLAIRFETFIEEFSNILQRQAQ 237
>gi|206561544|ref|YP_002232309.1| putative TolQ transport transmembrane protein [Burkholderia
cenocepacia J2315]
gi|198037586|emb|CAR53524.1| putative TolQ transport transmembrane protein [Burkholderia
cenocepacia J2315]
gi|325522826|gb|EGD01298.1| putative TolQ transport transmembrane protein [Burkholderia sp.
TJI49]
Length = 225
Score = 124 bits (312), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 121/220 (55%), Gaps = 3/220 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+SI +L + + + ++ LL + S++SW+ I +K R Q FE+ FWSG L
Sbjct: 6 DLSIISLVLNASVLAQAVMGLLLLLSLMSWTFIFRKWFAIRRARAQTERFEKDFWSGGDL 65
Query: 70 ETVCKSL-KNHHNIG-LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + +S N H IG L IF S M E+ K+ +K P + D R M + RE++
Sbjct: 66 QALYQSAANNRHTIGALERIFESGMREFLKAKEKRLSDPGLVLDGARRAMRASFQREMDV 125
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ L+FL S+ S +G+ G V G+M F+ +A + ++ PGI E+L++ +GL
Sbjct: 126 LEANLAFLASVGSVSPYIGLFGTVWGIMNSFRGLANVQQATLANVAPGIAEALVATAIGL 185
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ +AYN++ D + A++ E F EFS IL RQ +
Sbjct: 186 FAAIPAVVAYNRYAHDIDRLAIRFETFIEEFSNILQRQAQ 225
>gi|112774536|gb|ABI20705.1| putative MotA/TolQ/ExbB proton channel [Delftia sp. AN3]
Length = 263
Score = 124 bits (312), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 74/217 (34%), Positives = 113/217 (52%), Gaps = 3/217 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+SI +L +Q V+ ++ +L S+ SW+ I +KS +R FEQ FWSG SL
Sbjct: 34 DMSILSLVLQASWVVQLVMLILVGASVASWATIFRKSQTLKRVRSLNDGFEQDFWSGTSL 93
Query: 70 ETVCKSLKNHHNIG--LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ S +H G + IF S M E++K ++ + D R M + RE++E
Sbjct: 94 NDLYASAAHHAKQGGPMERIFASGMREYQKLRERRIADVNQLMDGTRRAMRASFQREMDE 153
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ LSFLG++ S VG+ G V G+M F A + ++ PGI E+L++ +GL
Sbjct: 154 VESGLSFLGTVGSVSPYVGLFGTVWGVMHAFTGFANMEQITLATVAPGIAEALVATAMGL 213
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
+IP+ AYN++ + A Q E F EFS IL R
Sbjct: 214 FAAIPAVTAYNRYAHQIDRVASQQETFIEEFSNILQR 250
>gi|115350734|ref|YP_772573.1| MotA/TolQ/ExbB proton channel [Burkholderia ambifaria AMMD]
gi|115280722|gb|ABI86239.1| Cell division and transport-associated protein TolQ [Burkholderia
ambifaria AMMD]
Length = 242
Score = 124 bits (312), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 121/220 (55%), Gaps = 3/220 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+SI +L + + + ++ LL + S++SW+ I +K R Q FE+ FWSG L
Sbjct: 23 DLSIISLVLNASVLAQAVMGLLLLLSLMSWTFIFRKWFAIRRARAQTERFERDFWSGGDL 82
Query: 70 ETVCKSL-KNHHNIG-LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + +S N H IG L IF S M E+ K+ +K P + D R M + RE++
Sbjct: 83 QALYQSAANNRHTIGALERIFESGMREFLKAKEKRLTDPGLVLDGARRAMRASFQREMDV 142
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ L+FL S+ S +G+ G V G+M F+ +A + ++ PGI E+L++ +GL
Sbjct: 143 LEANLAFLASVGSVSPYIGLFGTVWGIMNSFRGLANVQQATLANVAPGIAEALVATAIGL 202
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ +AYN++ D + A++ E F EFS IL RQ +
Sbjct: 203 FAAIPAVVAYNRYAHDIDRLAIRFETFIEEFSNILQRQAQ 242
>gi|167586276|ref|ZP_02378664.1| MotA/TolQ/ExbB proton channel [Burkholderia ubonensis Bu]
Length = 225
Score = 124 bits (312), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 121/220 (55%), Gaps = 3/220 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+SI +L + + + ++ LL + S++SW+ I +K R Q FE+ FWSG L
Sbjct: 6 DLSIISLVLNASVLAQAVMGLLLLLSLMSWTFIFRKWFAIRRARAQTERFERDFWSGGDL 65
Query: 70 ETVCKSL-KNHHNIG-LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + +S N H IG L IF S M E+ K+ +K P + D R M + RE++
Sbjct: 66 QALYQSAANNRHTIGALERIFESGMREFLKAKEKRISDPGLVLDGARRAMRASFQREMDV 125
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ L+FL S+ S +G+ G V G+M F+ +A + ++ PGI E+L++ +GL
Sbjct: 126 LEANLAFLASVGSVSPYIGLFGTVWGIMNSFRGLANVQQATLANVAPGIAEALVATAIGL 185
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ +AYN++ D + A++ E F EFS IL RQ +
Sbjct: 186 FAAIPAVVAYNRYAHDIDRLAIRFETFIEEFSNILQRQAQ 225
>gi|157828297|ref|YP_001494539.1| tolQ protein [Rickettsia rickettsii str. 'Sheila Smith']
gi|165933001|ref|YP_001649790.1| TolQ [Rickettsia rickettsii str. Iowa]
gi|13235464|emb|CAC33699.1| TolQ protein [Rickettsia rickettsii]
gi|157800778|gb|ABV76031.1| tolQ protein [Rickettsia rickettsii str. 'Sheila Smith']
gi|165908088|gb|ABY72384.1| TolQ [Rickettsia rickettsii str. Iowa]
Length = 241
Score = 124 bits (312), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 75/202 (37%), Positives = 119/202 (58%), Gaps = 3/202 (1%)
Query: 25 KCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGL 84
K ++ +L I SI SW++I+ K + +++ R FE +FWSG LE + +S+K N L
Sbjct: 33 KSVMLMLLIASIWSWAIILDKIFKLVQVQKSMRAFENVFWSGGVLEQLYESIKRSVNNPL 92
Query: 85 AAIFMSAMSEWKKSCDKGARSPI--GIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAG 142
A IF+SAM E K KG + ++RI +M +A RE+E++ + LSFL ++ S+
Sbjct: 93 ALIFVSAMDECKSLSTKGLSESLKNNHKERITGVMYLAQNREVEKLEKNLSFLATVGSSA 152
Query: 143 LLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIE 201
VG+ G V G+M FQSIA + ++ V PGI E+L++ +GL +IP+ I YN I
Sbjct: 153 PFVGLFGTVWGIMHSFQSIATSKNTSLAVVAPGIAEALLATAIGLFAAIPAVIFYNYLIS 212
Query: 202 DSKKFAMQMEGFANEFSAILSR 223
++E F +E ++ILS+
Sbjct: 213 RITLINNKIEDFISELNSILSK 234
>gi|160897904|ref|YP_001563486.1| protein TolQ [Delftia acidovorans SPH-1]
gi|160363488|gb|ABX35101.1| protein TolQ [Delftia acidovorans SPH-1]
Length = 234
Score = 124 bits (311), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 73/217 (33%), Positives = 113/217 (52%), Gaps = 3/217 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+SI +L +Q V+ ++ +L S+ SW+ I +KS +R FEQ FWSG SL
Sbjct: 5 DMSILSLVLQASWVVQLVMLILVGASVASWATIFRKSQTLKRVRSLNDGFEQDFWSGTSL 64
Query: 70 ETVCKSLKNHHNIG--LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ S +H G + IF S M E++K ++ + D R M + RE++E
Sbjct: 65 NDLYASAAHHAKQGGPMERIFASGMREYQKLRERRIADVNQLMDGTRRAMRASFQREMDE 124
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ LSFLG++ S +G+ G V G+M F A + ++ PGI E+L++ +GL
Sbjct: 125 VESGLSFLGTVGSVSPYIGLFGTVWGVMHAFTGFANMEQITLATVAPGIAEALVATAMGL 184
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
+IP+ AYN++ + A Q E F EFS IL R
Sbjct: 185 FAAIPAVTAYNRYAHQIDRVASQQETFIEEFSNILQR 221
>gi|46143832|ref|ZP_00133961.2| COG0811: Biopolymer transport proteins [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|126207784|ref|YP_001053009.1| colicin transport protein TolQ [Actinobacillus pleuropneumoniae
L20]
gi|307245113|ref|ZP_07527206.1| hypothetical protein appser1_3230 [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|307249516|ref|ZP_07531503.1| hypothetical protein appser4_3270 [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|307254069|ref|ZP_07535916.1| hypothetical protein appser9_3240 [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|307258524|ref|ZP_07540261.1| hypothetical protein appser11_3250 [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
gi|126096576|gb|ABN73404.1| colicin transport protein TolQ [Actinobacillus pleuropneumoniae
serovar 5b str. L20]
gi|306854002|gb|EFM86214.1| hypothetical protein appser1_3230 [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|306858371|gb|EFM90440.1| hypothetical protein appser4_3270 [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|306862994|gb|EFM94941.1| hypothetical protein appser9_3240 [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|306867428|gb|EFM99279.1| hypothetical protein appser11_3250 [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
Length = 226
Score = 124 bits (311), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 71/218 (32%), Positives = 115/218 (52%), Gaps = 3/218 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
+ ++ +LFMQ + VK +I +L FSILSW+VIIQ+S ++ FE FWSG+ L
Sbjct: 4 EFNLVSLFMQASIVVKIVILILISFSILSWAVIIQRSRVLTEAKKNALAFENKFWSGEDL 63
Query: 70 ETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + L+N + G IF + E+ + +P R M++A+ RE+E
Sbjct: 64 HRLHEGLENRRDGLNGSEQIFYAGFKEYMRLQQVNPDAPEATMKGSSRAMNLALNREVEN 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ + FLG++ S +G+ G V G+M F ++ + S+ PGI E+LI+ +GL
Sbjct: 124 LESYIPFLGTVGSISPYIGLFGTVWGIMHSFMGLSAVKQATLQSVAPGIAEALIATAIGL 183
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+IP+ +AYN+ K F +EF+ IL RQ
Sbjct: 184 FAAIPAVMAYNRLSLRVNKLEQDYANFIDEFTTILHRQ 221
>gi|260900757|ref|ZP_05909152.1| protein TolQ [Vibrio parahaemolyticus AQ4037]
gi|308110199|gb|EFO47739.1| protein TolQ [Vibrio parahaemolyticus AQ4037]
gi|328473196|gb|EGF44044.1| TolQ protein [Vibrio parahaemolyticus 10329]
Length = 232
Score = 124 bits (311), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 75/219 (34%), Positives = 115/219 (52%), Gaps = 5/219 (2%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
DISI LF+Q L VK ++ L SI SW++II++S + +FE FWSG L
Sbjct: 4 DISILDLFLQASLLVKLVMLTLLGMSIASWAMIIKRSKVLSQASKNAEQFEDKFWSGTDL 63
Query: 70 ETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + +K + G IF + +E+ + A SP I + R M VA+ARE++E
Sbjct: 64 SQLYQKVKGRKDEIAGTEEIFYAGFTEFARLRKSNANSPAYIMEGTGRAMRVAVAREVDE 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI--PGIIESLISILLG 185
+ L FL ++ S +G+ G V G+M F ++ G +S+ PGI E+LI+ +G
Sbjct: 124 LETSLPFLATVGSISPYIGLFGTVWGIMHAFIAL-GEVKQATLSMVAPGIAEALIATAMG 182
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
L +IP+ +AYN+ K F+ EF +IL RQ
Sbjct: 183 LFAAIPAVMAYNRLSNKVSKLEHTYATFSEEFHSILHRQ 221
>gi|28897831|ref|NP_797436.1| TolQ protein [Vibrio parahaemolyticus RIMD 2210633]
gi|260361762|ref|ZP_05774787.1| protein TolQ [Vibrio parahaemolyticus K5030]
gi|260876991|ref|ZP_05889346.1| protein TolQ [Vibrio parahaemolyticus AN-5034]
gi|260899062|ref|ZP_05907503.1| protein TolQ [Vibrio parahaemolyticus Peru-466]
gi|28806044|dbj|BAC59320.1| TolQ protein [Vibrio parahaemolyticus RIMD 2210633]
gi|308089139|gb|EFO38834.1| protein TolQ [Vibrio parahaemolyticus Peru-466]
gi|308093873|gb|EFO43568.1| protein TolQ [Vibrio parahaemolyticus AN-5034]
gi|308113252|gb|EFO50792.1| protein TolQ [Vibrio parahaemolyticus K5030]
Length = 232
Score = 124 bits (311), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 75/219 (34%), Positives = 115/219 (52%), Gaps = 5/219 (2%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
DISI LF+Q L VK ++ L SI SW++II++S + +FE FWSG L
Sbjct: 4 DISILDLFLQASLLVKLVMLTLLGMSIASWAMIIKRSKVLSQASKNAEQFEDKFWSGTDL 63
Query: 70 ETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + +K + G IF + +E+ + A SP I + R M VA+ARE++E
Sbjct: 64 SQLYQKVKGRKDEIAGTEEIFFAGFTEFARLRKSNANSPAYIMEGTGRAMRVAVAREVDE 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI--PGIIESLISILLG 185
+ L FL ++ S +G+ G V G+M F ++ G +S+ PGI E+LI+ +G
Sbjct: 124 LETSLPFLATVGSISPYIGLFGTVWGIMHAFIAL-GEVKQATLSMVAPGIAEALIATAMG 182
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
L +IP+ +AYN+ K F+ EF +IL RQ
Sbjct: 183 LFAAIPAVMAYNRLSNKVSKLEHTYATFSEEFHSILHRQ 221
>gi|67458896|ref|YP_246520.1| TolQ protein [Rickettsia felis URRWXCal2]
gi|67004429|gb|AAY61355.1| TolQ protein [Rickettsia felis URRWXCal2]
Length = 242
Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/202 (37%), Positives = 119/202 (58%), Gaps = 3/202 (1%)
Query: 25 KCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGL 84
K ++ +L I SI SW++I+ K ++R+ + FE +FWSG LE + +S+K N L
Sbjct: 34 KSVMLMLLIASIWSWAIILDKIFKLAQVQRRMKNFENVFWSGGVLEQLYESIKRSVNNPL 93
Query: 85 AAIFMSAMSEWKKSCDKGARSPI--GIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAG 142
A IF+SAM E K KG + ++RI M +A RE+E++ + LSFL ++ S+
Sbjct: 94 ALIFVSAMDECKSLNTKGLSDALKNNHKERITGAMYLAQNREVEKLEKNLSFLATVGSSA 153
Query: 143 LLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIE 201
VG+ G V G+M FQSIA + ++ V PGI E+L++ +GL +IP+ I YN I
Sbjct: 154 PFVGLFGTVWGIMHSFQSIATSKNTSLAVVAPGIAEALLATAIGLFAAIPAVIFYNYLIS 213
Query: 202 DSKKFAMQMEGFANEFSAILSR 223
++E F++E ++ILS+
Sbjct: 214 RITLINNKIEDFSSELNSILSK 235
>gi|307294756|ref|ZP_07574598.1| protein TolQ [Sphingobium chlorophenolicum L-1]
gi|306879230|gb|EFN10448.1| protein TolQ [Sphingobium chlorophenolicum L-1]
Length = 235
Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/235 (31%), Positives = 124/235 (52%), Gaps = 8/235 (3%)
Query: 1 MNNYGLAI------MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRR 54
M + GLA+ IS ALF+Q + VK ++ L + SI +W++II S R
Sbjct: 1 MPDVGLAVGSAAQAATISPLALFLQADIVVKVVMLGLLLASIWTWAMIIGFSFTLRKASR 60
Query: 55 QFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRID 114
Q R FEQ FW + ++ ++ + A + + ++EW++S + G +DR+
Sbjct: 61 QSRAFEQDFWKAEDIDRFYEA-RGKSEFPAARVMAAGVTEWRRSTAQKVIDREGTRDRLS 119
Query: 115 RMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIP 173
M IA E++ ++++L+ L ++ S VG+ G V G+M F SIA ++++ V P
Sbjct: 120 TAMSSTIAAEVDRLSDRLNILATIGSVAPFVGLFGTVWGIMRAFTSIAAEQNSSLAVVAP 179
Query: 174 GIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
GI E+L + +GL +IP+ IAYN+F + + FA+ F + LSR+ E
Sbjct: 180 GIAEALFATAIGLFAAIPAVIAYNRFSHGINRMESGLTRFADNFYSTLSRELEAQ 234
>gi|261252507|ref|ZP_05945080.1| MotA/TolQ/ExbB proton channel family protein [Vibrio orientalis CIP
102891]
gi|260935898|gb|EEX91887.1| MotA/TolQ/ExbB proton channel family protein [Vibrio orientalis CIP
102891]
Length = 232
Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/218 (33%), Positives = 115/218 (52%), Gaps = 3/218 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
DIS+ LF+Q L VK ++ +L SI+SW++II++S + FE FWSG L
Sbjct: 4 DISMLDLFLQASLLVKMVMLILLGMSIVSWAMIIKRSKVLSQASKDAEAFEDKFWSGTDL 63
Query: 70 ETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ ++ K + G IF S +E+ + A SP I + R M VA+ARE++E
Sbjct: 64 SVLYQNAKKRKDDLAGTEEIFYSGFTEFARLRKSNADSPDFIMEGTGRSMRVAVAREVDE 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ L FL ++ S +G+ G V G+M F ++ + + PGI E+L++ +GL
Sbjct: 124 LETNLPFLATVGSISPYIGLFGTVWGIMHAFIALGEVKQATLAMVAPGIAEALVATAMGL 183
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+IP+ +AYN+F K F+ EF +IL RQ
Sbjct: 184 FAAIPAVMAYNRFSSKVGKLEHNYATFSEEFHSILHRQ 221
>gi|197106550|ref|YP_002131927.1| MotA/TolQ/ExbB proton channel family protein [Phenylobacterium
zucineum HLK1]
gi|196479970|gb|ACG79498.1| MotA/TolQ/ExbB proton channel family protein [Phenylobacterium
zucineum HLK1]
Length = 404
Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 74/230 (32%), Positives = 116/230 (50%), Gaps = 8/230 (3%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
M+ + +I LF Q VK ++ L + S+ SW++I+ K F L R+ FE
Sbjct: 172 MDPAAVTPESFNIVNLFFQADWVVKLVMIGLALASLWSWTIILDKLFRFAALNREATRFE 231
Query: 61 QLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQ-----DRIDR 115
SG+SLE V L + A+ EW+ + KG P Q RIDR
Sbjct: 232 DQVASGRSLEDVAAEAGERPAHALPRMLQGALKEWRDARQKG--PPTEAQVAFLIQRIDR 289
Query: 116 MMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPG 174
+D IARE + L L +++A +G+ G V G+M FQ+IA + ++ V P
Sbjct: 290 HLDAVIARESARVENGLGALAIVATASPFIGLFGTVWGIMNSFQAIAIQKNTSLAVVAPA 349
Query: 175 IIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
I E+L + +GL +IP+ IA+N F + K+A ++EGFA++ S + R+
Sbjct: 350 IAEALFATAIGLVAAIPAYIAFNAFSTSAGKYAARLEGFADDLSTAIQRR 399
>gi|171059622|ref|YP_001791971.1| protein TolQ [Leptothrix cholodnii SP-6]
gi|170777067|gb|ACB35206.1| protein TolQ [Leptothrix cholodnii SP-6]
Length = 236
Score = 124 bits (310), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/218 (32%), Positives = 118/218 (54%), Gaps = 3/218 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D++I L Q V+ ++ L + S+ SW+VI K + +R FE+ FWSG+++
Sbjct: 4 DLNILHLITQASFVVQLVMATLMLVSLASWAVIFGKLIGLRRVRGANDGFEREFWSGRNV 63
Query: 70 ETVCKSLKNHHNIG--LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + + + IG L IF S M E+ K ++ + D R M ++ RE++
Sbjct: 64 QELYAHSERNAEIGAPLERIFASGMREFLKLRERRVGDAGSLLDGARRAMRASLQREMDA 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ LSFL ++ S VG+ G V G+M F +A ++ ++ PGI E+L++ +GL
Sbjct: 124 VEHNLSFLATVGSVSPYVGLFGTVWGIMHAFTGLANVQQVSLATVAPGIAEALVATAIGL 183
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+IP+ IAYN+F D + A+Q+E F EFS IL+R
Sbjct: 184 FAAIPAVIAYNRFSRDIDRIAIQLETFVEEFSNILARN 221
>gi|78065366|ref|YP_368135.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. 383]
gi|77966111|gb|ABB07491.1| Cell division and transport-associated protein TolQ [Burkholderia
sp. 383]
Length = 246
Score = 124 bits (310), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 121/220 (55%), Gaps = 3/220 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+SI +L + + + ++ LL + S++SW+ I +K R Q FE+ FWSG L
Sbjct: 27 DLSIISLVLNASVLAQAVMGLLLLLSLMSWTFIFRKWFAIRRARVQTERFEKDFWSGGDL 86
Query: 70 ETVCKSL-KNHHNIG-LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + +S N H IG L IF S M E+ K+ +K P + D R M + RE++
Sbjct: 87 QALYQSAANNRHTIGALERIFESGMREFLKAKEKRISDPGLVLDGARRAMRASFQREMDV 146
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ L+FL S+ S +G+ G V G+M F+ +A + ++ PGI E+L++ +GL
Sbjct: 147 LEANLAFLASVGSVSPYIGLFGTVWGIMNSFRGLANVQQATLANVAPGIAEALVATAIGL 206
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ +AYN++ D + A++ E F EFS IL RQ +
Sbjct: 207 FAAIPAVVAYNRYAHDIDRLAIRFETFIEEFSNILQRQAQ 246
>gi|157964385|ref|YP_001499209.1| hypothetical protein RMA_0432 [Rickettsia massiliae MTU5]
gi|157844161|gb|ABV84662.1| TolQ [Rickettsia massiliae MTU5]
Length = 244
Score = 124 bits (310), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/204 (38%), Positives = 118/204 (57%), Gaps = 7/204 (3%)
Query: 25 KCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGL 84
K ++ +L I SI SW++I+ K + +++ R FE +FWSG LE + +S+K N L
Sbjct: 36 KSVMLMLLIASIWSWAIILDKIFKLVQVQKSMRAFENVFWSGGVLEQLYESIKRSVNNPL 95
Query: 85 AAIFMSAMSEWKKSCDKGARSPI--GIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAG 142
A IF+SAM E K KG + ++RI M +A RE+E++ + LSFL ++ S+
Sbjct: 96 ALIFVSAMDECKSLSTKGLSEGLKNNHKERIMGAMYLAQNREVEKLEKNLSFLATVGSSA 155
Query: 143 LLVGILGAVLGMMGFFQSIAGYYSNNV---VSIPGIIESLISILLGLCVSIPSSIAYNKF 199
VG+ G V G+M FQSIA SNN V PGI E+L++ +GL +IP+ I YN
Sbjct: 156 PFVGLFGTVWGIMHSFQSIAT--SNNTSLAVVAPGIAEALLATAIGLFAAIPAVIFYNYL 213
Query: 200 IEDSKKFAMQMEGFANEFSAILSR 223
I ++E F +E ++ILS+
Sbjct: 214 ISRITLINNKIEDFISELNSILSK 237
>gi|219870348|ref|YP_002474723.1| colicin transport protein/biopolymer transport protein, membrane
spanning protein in TolA-TolQ-TolR complex [Haemophilus
parasuis SH0165]
gi|219690552|gb|ACL31775.1| colicin transport protein/biopolymer transport protein, membrane
spanning protein in TolA-TolQ-TolR complex [Haemophilus
parasuis SH0165]
Length = 226
Score = 124 bits (310), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/218 (32%), Positives = 116/218 (53%), Gaps = 3/218 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
+ ++ +LFM+ + VK +I +L FS+LSW+VIIQ+S ++ FE FWSG+ L
Sbjct: 4 EFNLVSLFMEASIVVKLVILILISFSVLSWAVIIQRSRVLTRAKKDSLNFEDRFWSGEDL 63
Query: 70 ETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + L++ + G IF E+ + SP I R M++A+ RELEE
Sbjct: 64 HRLHEGLEHRRDGLTGAEQIFYVGFKEFNRLQQANPDSPESIIQGSSRAMNLALNRELEE 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ + FLG++ S +G+ G V G+M F ++ + S+ PGI E+LI+ +GL
Sbjct: 124 LENYIPFLGTVGSISPYIGLFGTVWGIMHSFMGLSAVKQATLQSVAPGIAEALIATAIGL 183
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+IP+ +AYN+ K F +EF+ IL R+
Sbjct: 184 FAAIPAVMAYNRLNLRVGKLEQNYVNFIDEFTTILHRK 221
>gi|153832499|ref|ZP_01985166.1| protein TolQ [Vibrio harveyi HY01]
gi|156973897|ref|YP_001444804.1| hypothetical protein VIBHAR_01607 [Vibrio harveyi ATCC BAA-1116]
gi|148871294|gb|EDL70166.1| protein TolQ [Vibrio harveyi HY01]
gi|156525491|gb|ABU70577.1| hypothetical protein VIBHAR_01607 [Vibrio harveyi ATCC BAA-1116]
Length = 232
Score = 124 bits (310), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/219 (34%), Positives = 114/219 (52%), Gaps = 5/219 (2%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
DISI LF+Q L VK ++ L SI SW++II++S + FE FWSG L
Sbjct: 4 DISILDLFLQASLLVKLVMLTLLGMSIASWAMIIKRSKVLSQASKDAESFEDKFWSGTDL 63
Query: 70 ETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + +K + G IF + +E+ + A SP I + R M VA+ARE++E
Sbjct: 64 SQLYQKVKGRKDDITGTEEIFYAGFTEFARLRKSNANSPAYIMEGTGRAMRVAVAREVDE 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI--PGIIESLISILLG 185
+ L FL ++ S +G+ G V G+M F ++ G +S+ PGI E+LI+ +G
Sbjct: 124 LETSLPFLATVGSISPYIGLFGTVWGIMHAFIAL-GEVKQATLSMVAPGIAEALIATAMG 182
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
L +IP+ +AYN+ K F+ EF +IL RQ
Sbjct: 183 LFAAIPAVMAYNRLSNKVSKLEHTYATFSEEFHSILHRQ 221
>gi|221134417|ref|ZP_03560722.1| tolQ protein [Glaciecola sp. HTCC2999]
Length = 222
Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/218 (33%), Positives = 121/218 (55%), Gaps = 3/218 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S LF+Q L VK ++ LL SI+SW+ I+Q+S + + + +FE+ FWSG L
Sbjct: 4 DMSFIGLFLQASLVVKLVMILLMGASIVSWAFIVQRSRALNSAKNELFQFEEQFWSGTDL 63
Query: 70 ETVCKSLKNHHNI-GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ + L + I G+ +IF++ E+ + A+ + ++ R M VA++RE++E+
Sbjct: 64 NKLFQDLSSRSQITGVHSIFVAGFREFVRLRKSEAQGDVVVEGS-SRAMRVALSREVDEL 122
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLC 187
KL FL ++ S +G+ G V G+M F ++ + + PGI E+LI+ +GL
Sbjct: 123 ESKLPFLATVGSISPYIGLFGTVWGIMNAFIALGQVQQATLAMVAPGIAEALIATAIGLF 182
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ IAYN+F +K F EF+AIL RQ
Sbjct: 183 AAIPAVIAYNRFSNQVEKIENGYINFMEEFAAILQRQA 220
>gi|52424775|ref|YP_087912.1| TolQ protein [Mannheimia succiniciproducens MBEL55E]
gi|52306827|gb|AAU37327.1| TolQ protein [Mannheimia succiniciproducens MBEL55E]
Length = 228
Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 118/222 (53%), Gaps = 3/222 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D++ F LF++ + V+ +I +L FS++SW++IIQ+S T + FE FWSG+ L
Sbjct: 4 DLNFFELFIKASIVVQIVILILIAFSVISWTIIIQRSRVLTTALKDSSAFEDRFWSGEDL 63
Query: 70 ETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + L N + G IF E+ + +P I + R M++ + RE+EE
Sbjct: 64 TKLYEGLSNRRDGLTGSEQIFYVGFKEFSRLKQANPEAPESIIEGSSRAMNLTMNREIEE 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ ++ FL +++S +G+ G V G+M F ++G + + PGI E+LI+ +GL
Sbjct: 124 LEGRIPFLATVASISPYIGLFGTVWGIMHAFMGLSGAKQATLQMVAPGIAEALIATAIGL 183
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
+IP+ +AYN+ K F +EF+ IL RQ G+
Sbjct: 184 FAAIPAVMAYNRLSLRLNKLEQNYGNFIDEFTTILHRQVFGS 225
>gi|294013403|ref|YP_003546863.1| biopolymer transport protein TolQ [Sphingobium japonicum UT26S]
gi|292676733|dbj|BAI98251.1| biopolymer transport protein TolQ [Sphingobium japonicum UT26S]
Length = 239
Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/235 (31%), Positives = 124/235 (52%), Gaps = 8/235 (3%)
Query: 1 MNNYGLAI------MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRR 54
M + GLA+ IS ALF+Q + VK ++ L + SI +W++II S R
Sbjct: 5 MPDVGLAVGSAAQAATISPLALFLQADIVVKVVMLGLLLASIWTWAMIIGFSFTLRKASR 64
Query: 55 QFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRID 114
Q R FEQ FW + ++ ++ + A + + ++EW++S + G +DR+
Sbjct: 65 QSRAFEQDFWKAEDIDRFYEA-RGKSEFPAARVMAAGVTEWRRSTAQKVIDREGTRDRLS 123
Query: 115 RMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIP 173
M IA E++ ++++L+ L ++ S VG+ G V G+M F SIA ++++ V P
Sbjct: 124 TAMSSTIAAEVDRLSDRLNILATIGSVAPFVGLFGTVWGIMRAFTSIAAEQNSSLAVVAP 183
Query: 174 GIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
GI E+L + +GL +IP+ IAYN+F + + FA+ F + LSR+ E
Sbjct: 184 GIAEALFATAIGLFAAIPAVIAYNRFSHGINRMESGLTRFADGFYSTLSRELEAQ 238
>gi|194290410|ref|YP_002006317.1| membrane spanning protein in tola-tolq-tolr complex; proton channel
component [Cupriavidus taiwanensis LMG 19424]
gi|193224245|emb|CAQ70254.1| membrane spanning protein in TolA-TolQ-TolR complex; putative
proton channel component [Cupriavidus taiwanensis LMG
19424]
Length = 227
Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/220 (33%), Positives = 120/220 (54%), Gaps = 4/220 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+SI L + + + ++ LL + S+ SW+ I +K + + R Q FE+ FW+G L
Sbjct: 9 DMSIVTLVLHASVLAQAVMALLLVMSLFSWTYIFRKHLAVRSARTQTEGFERDFWAGGDL 68
Query: 70 ETVCKS-LKNHHNIG-LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + S + N HN G L IF S M E+ K+ ++G + + D R M A RE++
Sbjct: 69 QALYNSAVNNRHNTGALERIFESGMGEFLKARERGNEAG-ALLDAARRAMRAAYQREMDV 127
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ L FL S+ S +G+ G V G+M F+ ++ + S+ PGI E+L++ +GL
Sbjct: 128 LESHLPFLASVGSVSPYIGLFGTVWGIMNAFRGLSNVQQATLASVAPGIAEALVATAIGL 187
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ IAYN++ + + A++ E F EF IL RQT
Sbjct: 188 FAAIPAVIAYNRYATEIDRLAIRFESFMEEFLNILQRQTR 227
>gi|15892345|ref|NP_360059.1| tolQ protein [Rickettsia conorii str. Malish 7]
gi|34580648|ref|ZP_00142128.1| tolQ protein [Rickettsia sibirica 246]
gi|229586571|ref|YP_002845072.1| TolQ [Rickettsia africae ESF-5]
gi|15619491|gb|AAL02960.1| tolQ protein [Rickettsia conorii str. Malish 7]
gi|28262033|gb|EAA25537.1| tolQ protein [Rickettsia sibirica 246]
gi|228021621|gb|ACP53329.1| TolQ [Rickettsia africae ESF-5]
Length = 241
Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/202 (37%), Positives = 118/202 (58%), Gaps = 3/202 (1%)
Query: 25 KCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGL 84
K ++ +L I SI SW++I+ K + +++ R FE +FWSG LE + +S+K N L
Sbjct: 33 KSVMLMLLIASIWSWAIILDKIFKLVQVQKSMRAFENVFWSGGVLEQLYESIKRSVNNPL 92
Query: 85 AAIFMSAMSEWKKSCDKGARSPI--GIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAG 142
A IF+SAM E K KG + ++RI M +A RE+E++ + LSFL ++ S+
Sbjct: 93 ALIFVSAMDECKSLSTKGLSEGLKNNHKERITGAMYLAQNREVEKLEKNLSFLATVGSSA 152
Query: 143 LLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIE 201
VG+ G V G+M FQSIA + ++ V PGI E+L++ +GL +IP+ I YN I
Sbjct: 153 PFVGLFGTVWGIMHSFQSIATSKNTSLAVVAPGIAEALLATAIGLFAAIPAVIFYNYLIS 212
Query: 202 DSKKFAMQMEGFANEFSAILSR 223
++E F +E ++ILS+
Sbjct: 213 RITLINNKIEDFISELNSILSK 234
>gi|91781926|ref|YP_557132.1| biopolymer MotA/TolQ/ExbB proton channel family transporter
[Burkholderia xenovorans LB400]
gi|91685880|gb|ABE29080.1| Cell division and transport-associated protein TolQ [Burkholderia
xenovorans LB400]
Length = 225
Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/220 (35%), Positives = 119/220 (54%), Gaps = 3/220 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+SI +L + L + ++ LL + S+LSW+ I +K R Q FE+ FWSG L
Sbjct: 6 DLSIVSLVLNASLLAQAVMALLLLLSLLSWTFIFRKWFAIRRARTQTERFERDFWSGGDL 65
Query: 70 ETVCKSL-KNHHNIG-LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + +S N H IG L IF S M E+ K +K P I D R M A RE++
Sbjct: 66 QALYQSAANNRHTIGALERIFESGMREFLKGKEKRLNDPSAILDGARRAMRAAFQREMDV 125
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ L+FL S+ S +G+ G V G+M F+ +A + ++ PGI E+L + +GL
Sbjct: 126 LEANLAFLASVGSVSPYIGLFGTVWGIMNAFRGLANVQQATLANVAPGIAEALTATAIGL 185
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ +AYN++ D + A++ E F EFS IL RQ +
Sbjct: 186 FAAIPAVVAYNRYAHDIDRLAIRFETFIEEFSNILQRQAQ 225
>gi|186477201|ref|YP_001858671.1| protein TolQ [Burkholderia phymatum STM815]
gi|184193660|gb|ACC71625.1| protein TolQ [Burkholderia phymatum STM815]
Length = 225
Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/220 (35%), Positives = 118/220 (53%), Gaps = 3/220 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+SI +L + L + ++ LL + S++SW+ I +K R Q FE+ FWSG L
Sbjct: 6 DLSIISLVLNASLLAQAVMALLLLLSLMSWTFIFRKWFAIRRARAQTERFERDFWSGGDL 65
Query: 70 ETVCKSL-KNHHNIG-LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + +S N H IG L IF S M E+ K +K P I D R M A RE++
Sbjct: 66 QALYQSAANNRHTIGALERIFESGMREFLKGKEKRINDPGAILDGARRAMRAAFQREMDV 125
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ L+FL S+ S +G+ G V G+M F+ +A + ++ PGI E+L + +GL
Sbjct: 126 LEANLAFLASVGSVSPYIGLFGTVWGIMNAFRGLANVQQATLANVAPGIAEALTATAIGL 185
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ +AYN++ D + A++ E F EFS IL RQ
Sbjct: 186 FAAIPAVVAYNRYAHDIDRLAIRFETFIEEFSNILQRQAH 225
>gi|113868788|ref|YP_727277.1| biopolymer transport protein [Ralstonia eutropha H16]
gi|113527564|emb|CAJ93909.1| biopolymer transport protein [Ralstonia eutropha H16]
Length = 227
Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/220 (33%), Positives = 119/220 (54%), Gaps = 4/220 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+SI L + L + ++ LL + S+ SW+ I +K + + R Q FE+ FW+G L
Sbjct: 9 DMSIVTLVLHASLLAQAVMALLLVMSLFSWTYIFRKHLALRSARTQTEGFERDFWAGGDL 68
Query: 70 ETVCKS-LKNHHNIG-LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + S + N HN G L IF S M E+ K+ ++G + + D R M A RE++
Sbjct: 69 QALYNSAVNNRHNTGALERIFESGMGEFLKARERGNEAG-ALLDAARRAMRAAYQREMDV 127
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ L FL S+ S +G+ G V G+M F+ ++ + S+ PGI E+L++ +GL
Sbjct: 128 LESHLPFLASVGSVSPYIGLFGTVWGIMNAFRGLSNVQQATLASVAPGIAEALVATAIGL 187
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ IAYN++ + + A++ E F EF IL RQ
Sbjct: 188 FAAIPAVIAYNRYATEIDRLAIRFESFMEEFLNILQRQAR 227
>gi|260912910|ref|ZP_05919395.1| TolQ colicin import protein [Pasteurella dagmatis ATCC 43325]
gi|260632900|gb|EEX51066.1| TolQ colicin import protein [Pasteurella dagmatis ATCC 43325]
Length = 229
Score = 122 bits (307), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 119/224 (53%), Gaps = 3/224 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D++ LF++ + V+ +I +L IFSI+SW++IIQ+S + FE FWSG+ L
Sbjct: 4 DLNFLELFLKASIVVQLVIVILLIFSIMSWAIIIQRSRVLTRALKDSAAFEDRFWSGEDL 63
Query: 70 ETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + L+N + G IF E+ + +P I R M++A+ RE+E+
Sbjct: 64 NRLYEGLENRRDGLSGSEQIFYVGFKEFSRLKQANPDAPESIIQGSTRAMNLAMNREVED 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ ++ FL +++S +G+ G V G+M F +++G + + PGI E+LI+ +GL
Sbjct: 124 LETRVPFLATVASISPYIGLFGTVWGIMHAFMALSGAKQATLQMVAPGIAEALIATAIGL 183
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
+IP+ +AYN+ K F +EF+ IL RQ G S
Sbjct: 184 FAAIPAVMAYNRLSLRVNKLEQNYGNFIDEFTTILHRQVFGRNS 227
>gi|269963135|ref|ZP_06177470.1| tolQ protein [Vibrio harveyi 1DA3]
gi|269832099|gb|EEZ86223.1| tolQ protein [Vibrio harveyi 1DA3]
Length = 232
Score = 122 bits (307), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 75/219 (34%), Positives = 113/219 (51%), Gaps = 5/219 (2%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
DISI LF+Q L VK ++ L SI SW++II++S + FE FWSG L
Sbjct: 4 DISILDLFLQASLLVKLVMLTLLGMSIASWAMIIKRSKVLSQASKDAESFEDKFWSGTDL 63
Query: 70 ETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + +K G IF + +E+ + A SP I + R M VA+ARE++E
Sbjct: 64 SQLYQKVKGRKEDITGTEEIFYAGFTEFARLRKSNANSPAYIMEGTGRAMRVAVAREVDE 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI--PGIIESLISILLG 185
+ L FL ++ S +G+ G V G+M F ++ G +S+ PGI E+LI+ +G
Sbjct: 124 LETSLPFLATVGSISPYIGLFGTVWGIMHAFIAL-GEVKQATLSMVAPGIAEALIATAMG 182
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
L +IP+ +AYN+ K F+ EF +IL RQ
Sbjct: 183 LFAAIPAVMAYNRLSNKVSKLEHTYATFSEEFHSILHRQ 221
>gi|91205080|ref|YP_537435.1| hypothetical protein RBE_0265 [Rickettsia bellii RML369-C]
gi|157827583|ref|YP_001496647.1| hypothetical protein A1I_06470 [Rickettsia bellii OSU 85-389]
gi|91068624|gb|ABE04346.1| TolQ [Rickettsia bellii RML369-C]
gi|157802887|gb|ABV79610.1| TolQ [Rickettsia bellii OSU 85-389]
Length = 241
Score = 122 bits (307), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 75/202 (37%), Positives = 117/202 (57%), Gaps = 3/202 (1%)
Query: 25 KCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGL 84
K ++ +L I SI SW++I+ K + ++R+ R FE FWSG LE + S+K N L
Sbjct: 33 KSVMLMLLIASIWSWAIILDKVFKLMQVQRKMRAFENTFWSGGVLEQLYDSIKRSVNNPL 92
Query: 85 AAIFMSAMSEWKKSCDKGARSPI--GIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAG 142
A IF+SAM E K KG + ++RI M +A RE+E++ + LSFL ++ S+
Sbjct: 93 ALIFVSAMDECKSINTKGLPELLKNNHKERITNSMYLAQNREIEKLEKNLSFLATVGSSS 152
Query: 143 LLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIE 201
+G+ G V G+M FQSIA + ++ V PGI E+L++ +GL +IP+ I YN I
Sbjct: 153 PFIGLFGTVWGIMHSFQSIATSKNTSLAVVAPGIAEALLATAIGLFAAIPAVIFYNYLIS 212
Query: 202 DSKKFAMQMEGFANEFSAILSR 223
++E F +E ++ILS+
Sbjct: 213 RITLINNKIEDFISELNSILSK 234
>gi|296162183|ref|ZP_06844979.1| protein TolQ [Burkholderia sp. Ch1-1]
gi|295887569|gb|EFG67391.1| protein TolQ [Burkholderia sp. Ch1-1]
Length = 225
Score = 122 bits (307), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 78/220 (35%), Positives = 119/220 (54%), Gaps = 3/220 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+SI +L + L + ++ LL + S+LSW+ I +K R Q FE+ FWSG L
Sbjct: 6 DLSIVSLVLNASLLAQAVMALLLLLSLLSWTFIFRKWFAIRRARAQTERFERDFWSGGDL 65
Query: 70 ETVCKSL-KNHHNIG-LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + +S N H IG L IF S M E+ K +K P I D R M A RE++
Sbjct: 66 QALYQSAANNRHTIGALERIFESGMREFLKGKEKRLNDPGAILDGARRAMRAAFQREMDV 125
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ L+FL S+ S +G+ G V G+M F+ +A + ++ PGI E+L + +GL
Sbjct: 126 LEANLAFLASVGSVSPYIGLFGTVWGIMNAFRGLANVQQATLANVAPGIAEALTATAIGL 185
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ +AYN++ D + A++ E F EFS IL RQ +
Sbjct: 186 FAAIPAVVAYNRYAHDIDRLAIRFETFIEEFSNILQRQAQ 225
>gi|165918701|ref|ZP_02218787.1| TolQ protein [Coxiella burnetii RSA 334]
gi|165917636|gb|EDR36240.1| TolQ protein [Coxiella burnetii RSA 334]
Length = 237
Score = 122 bits (307), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 71/218 (32%), Positives = 117/218 (53%), Gaps = 3/218 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
+ ++++ L VK +I LLF+ SI SWS+IIQ+ RR+ ++FE LFWSG L
Sbjct: 4 EPTLWSFVAHASLIVKMVIFLLFLASIASWSIIIQRVFFVKRTRREMKKFEHLFWSGVDL 63
Query: 70 ETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
T+ L + IG+++IF + +E+ + + +P I + R M +A +RE +
Sbjct: 64 TTLYNQLSEKKDKLIGMSSIFYAGFNEFTRLRQELGSNPKAILEGTHRAMRIAQSREADL 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ LSFL ++ S VG+ G V G+M F+++ + + PGI E+LI+ +GL
Sbjct: 124 LERNLSFLATVGSTSPYVGLFGTVWGIMTSFRALGAVQQVTIAMVAPGISEALIATAVGL 183
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+IP+ IAYN+F + + F E IL R+
Sbjct: 184 FAAIPAVIAYNRFSNELNAITQNYDTFQEEILNILHRR 221
>gi|56476925|ref|YP_158514.1| TOLQ-related transport transmembrane protein [Aromatoleum
aromaticum EbN1]
gi|56312968|emb|CAI07613.1| TOLQ-related transport transmembrane protein [Aromatoleum
aromaticum EbN1]
Length = 224
Score = 122 bits (307), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 73/218 (33%), Positives = 115/218 (52%), Gaps = 4/218 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
++SI +L Q + V+ ++TLL S++SW I +KS + R + FE+ FWSG L
Sbjct: 6 NLSIISLVSQASVLVQLVMTLLATLSLVSWYWIFRKSFQIRSARNKTNGFERDFWSGGDL 65
Query: 70 ETVCKSLK--NHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ +S H G+ IF S E+ K K I D R M RE+++
Sbjct: 66 NGLFQSAAAARHQTGGMERIFESGYREFTKLRAKSHDHAATI-DGARRAMRATYQREMDD 124
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ L+FL S+ S +G+LG V G+M F+ ++ S + + PGI E+L++ +GL
Sbjct: 125 LEAHLAFLASVGSVSPYIGLLGTVWGIMNAFRGLSNVSSATLAQVAPGIAEALVATAIGL 184
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+IP+ +AYN+F D + ++ E F EFS IL RQ
Sbjct: 185 FAAIPAVVAYNRFAHDIDRVGIRFESFMEEFSNILQRQ 222
>gi|29654865|ref|NP_820557.1| TolQ [Coxiella burnetii RSA 493]
gi|29542134|gb|AAO91071.1| TolQ [Coxiella burnetii RSA 493]
Length = 237
Score = 122 bits (307), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 71/218 (32%), Positives = 117/218 (53%), Gaps = 3/218 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
+ ++++ L VK +I LLF+ SI SWS+IIQ+ RR+ ++FE LFWSG L
Sbjct: 4 EPTLWSFVAHASLIVKMVIFLLFLASIASWSIIIQRVFFVKRTRREMKKFEHLFWSGVDL 63
Query: 70 ETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
T+ L + IG+++IF + +E+ + + +P I + R M +A +RE +
Sbjct: 64 TTLYNRLSKKKDKLIGMSSIFYAGFNEFTRLRQELGSNPKAILEGTHRAMRIAQSREADL 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ LSFL ++ S VG+ G V G+M F+++ + + PGI E+LI+ +GL
Sbjct: 124 LERNLSFLATVGSTSPYVGLFGTVWGIMTSFRALGAVQQVTIAMVAPGISEALIATAVGL 183
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+IP+ IAYN+F + + F E IL R+
Sbjct: 184 FAAIPAVIAYNRFSNELNAITQNYDTFQEEILNILHRR 221
>gi|91227607|ref|ZP_01261911.1| TolQ protein [Vibrio alginolyticus 12G01]
gi|269967689|ref|ZP_06181739.1| tolQ protein [Vibrio alginolyticus 40B]
gi|91188500|gb|EAS74793.1| TolQ protein [Vibrio alginolyticus 12G01]
gi|269827776|gb|EEZ82060.1| tolQ protein [Vibrio alginolyticus 40B]
Length = 232
Score = 122 bits (307), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 74/219 (33%), Positives = 116/219 (52%), Gaps = 5/219 (2%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
DISI LF+Q L VK ++ L SI+SW++II++S + +FE FWSG L
Sbjct: 4 DISILDLFLQASLLVKLVMLTLLGMSIVSWAMIIKRSKVLSQASKNAEQFEDKFWSGTDL 63
Query: 70 ETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + +K + G IF + +E+ + A SP I + R M VA++RE++E
Sbjct: 64 SQLYQKVKARKDEIEGTEEIFYAGFTEFARLRKSNANSPAYIMEGTGRAMRVAVSREVDE 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI--PGIIESLISILLG 185
+ L FL ++ S +G+ G V G+M F ++ G +S+ PGI E+LI+ +G
Sbjct: 124 LETSLPFLATVGSISPYIGLFGTVWGIMHAFIAL-GEVKQATLSMVAPGIAEALIATAMG 182
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
L +IP+ +AYN+ K F+ EF +IL RQ
Sbjct: 183 LFAAIPAVMAYNRLSNKVSKLEHTYATFSEEFHSILHRQ 221
>gi|254448719|ref|ZP_05062177.1| protein TolQ [gamma proteobacterium HTCC5015]
gi|198261727|gb|EDY86014.1| protein TolQ [gamma proteobacterium HTCC5015]
Length = 239
Score = 122 bits (307), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 119/219 (54%), Gaps = 6/219 (2%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+SI L + V+ ++ LLF S+ SW VI K + + FE FWSG L
Sbjct: 7 LSIVGLIWEASFIVQLVMLLLFAASVTSWWVIYLKVKGYKQANEEADRFEDQFWSGGDLR 66
Query: 71 TVCKSLKNHH--NIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ ++L+N G+ IF + E+ + G P + + R+M VA++RE++E+
Sbjct: 67 DIYEALQNRRVPRQGMEHIFEAGYREYARQVRLGV-VPGQVVEAAQRVMRVALSREIDEL 125
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI--PGIIESLISILLGL 186
+LSFL ++ S VG+ G V+G+M F+++ G +S+ PGI E+LI+ +GL
Sbjct: 126 ETRLSFLATVGSTSPYVGLFGTVVGIMNSFRAL-GQVQQATLSMVAPGIAEALIATAIGL 184
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ +AYN+F ++ ++ + F EF+A++ RQ
Sbjct: 185 LAAIPAVVAYNRFANQVERLELRYDNFKEEFAALIHRQA 223
>gi|153208745|ref|ZP_01946983.1| TolQ protein [Coxiella burnetii 'MSU Goat Q177']
gi|154706732|ref|YP_001423834.1| TolQ [Coxiella burnetii Dugway 5J108-111]
gi|161830814|ref|YP_001597409.1| TolQ protein [Coxiella burnetii RSA 331]
gi|212212075|ref|YP_002303011.1| TolQ [Coxiella burnetii CbuG_Q212]
gi|212219286|ref|YP_002306073.1| TolQ [Coxiella burnetii CbuK_Q154]
gi|120575777|gb|EAX32401.1| TolQ protein [Coxiella burnetii 'MSU Goat Q177']
gi|154356018|gb|ABS77480.1| TolQ [Coxiella burnetii Dugway 5J108-111]
gi|161762681|gb|ABX78323.1| TolQ protein [Coxiella burnetii RSA 331]
gi|212010485|gb|ACJ17866.1| TolQ [Coxiella burnetii CbuG_Q212]
gi|212013548|gb|ACJ20928.1| TolQ [Coxiella burnetii CbuK_Q154]
Length = 237
Score = 122 bits (307), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 71/218 (32%), Positives = 117/218 (53%), Gaps = 3/218 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
+ ++++ L VK +I LLF+ SI SWS+IIQ+ RR+ ++FE LFWSG L
Sbjct: 4 EPTLWSFVAHASLIVKMVIFLLFLASIASWSIIIQRVFFVKRTRREMKKFEHLFWSGVDL 63
Query: 70 ETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
T+ L + IG+++IF + +E+ + + +P I + R M +A +RE +
Sbjct: 64 TTLYNRLSEKKDKLIGMSSIFYAGFNEFTRLRQELGSNPKAILEGTHRAMRIAQSREADL 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ LSFL ++ S VG+ G V G+M F+++ + + PGI E+LI+ +GL
Sbjct: 124 LERNLSFLATVGSTSPYVGLFGTVWGIMTSFRALGAVQQVTIAMVAPGISEALIATAVGL 183
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+IP+ IAYN+F + + F E IL R+
Sbjct: 184 FAAIPAVIAYNRFSNELNAITQNYDTFQEEILNILHRR 221
>gi|15602835|ref|NP_245907.1| hypothetical protein PM0970 [Pasteurella multocida subsp. multocida
str. Pm70]
gi|12721295|gb|AAK03054.1| TolQ [Pasteurella multocida subsp. multocida str. Pm70]
Length = 229
Score = 122 bits (306), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 117/221 (52%), Gaps = 3/221 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D++ LF++ + V+ +I +L IFSI+SW++IIQ+S + FE FWSG+ L
Sbjct: 4 DLNFLELFLKASIVVQFVIVILIIFSIMSWAIIIQRSRILTKALKDSAAFEDRFWSGEDL 63
Query: 70 ETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ L+N + G IF E+ + +P I R M++A+ RE+EE
Sbjct: 64 NRLFDGLENKRDGLSGSEQIFYVGFKEFSRLKQANPNAPEAIIQGSSRAMNLAMNREVEE 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ ++ FL +++S +G+ G V G+M F +++G + + PGI E+LI+ +GL
Sbjct: 124 LETRVPFLATVASISPYIGLFGTVWGIMHAFMALSGAKQATLQMVAPGIAEALIATAIGL 183
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEG 227
+IP+ +AYN+ K F +EF+ IL RQ G
Sbjct: 184 FAAIPAVMAYNRLSLRVSKLEQNYGNFIDEFTTILHRQAFG 224
>gi|114570969|ref|YP_757649.1| MotA/TolQ/ExbB proton channel [Maricaulis maris MCS10]
gi|114341431|gb|ABI66711.1| Cell division and transport-associated protein TolQ [Maricaulis
maris MCS10]
Length = 222
Score = 122 bits (306), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 110/214 (51%), Gaps = 10/214 (4%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLET 71
S +ALFM+ VK ++ +L SI SW++ I KS+ L + R+FE+ FWSG+SL+
Sbjct: 16 SFYALFMRADWVVKGVMGILAFMSIWSWAIAIDKSLQLRGLHAKGRQFEREFWSGRSLDA 75
Query: 72 VCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEK 131
+ + + +F + + EWK G R+ + R++ E
Sbjct: 76 LSDQFAKNAREPFSRVFAAGLREWKGDNPGG---------RVAKAAGAEAGRQMTESEGG 126
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSI 190
L L +++SA VG+ G V G+M F+SIA N+ V PGI E+L + LGL +I
Sbjct: 127 LGILATIASAAPFVGLFGTVWGIMNAFRSIAASQDTNLAVVAPGIAEALFATALGLLAAI 186
Query: 191 PSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
P+ I +N + K+ +++GF +E SA+ R
Sbjct: 187 PAVIFFNALSANLAKYGSRLDGFVDELSALADRD 220
>gi|302381974|ref|YP_003817797.1| protein TolQ [Brevundimonas subvibrioides ATCC 15264]
gi|302192602|gb|ADL00174.1| protein TolQ [Brevundimonas subvibrioides ATCC 15264]
Length = 255
Score = 122 bits (306), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 76/213 (35%), Positives = 117/213 (54%), Gaps = 4/213 (1%)
Query: 16 LFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKS 75
LFM VK ++ L + S+ SW++II K+V F L RQ FE SG+SLE V
Sbjct: 18 LFMTADWVVKSVMVGLAVASVWSWTIIIDKAVRFTALNRQADAFEAAISSGRSLEDVAAQ 77
Query: 76 LKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIG---IQDRIDRMMDVAIARELEEITEKL 132
L + + A+ +WK++ KG + + RIDR +D IARE + I E L
Sbjct: 78 AGPQPTHALPRMLVVALGDWKETRQKGPMTDTQGNLLVSRIDRALDSLIAREGQRIEEGL 137
Query: 133 SFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCVSIP 191
L +++A +G+ G V G+M F IA + N+ ++ P I E+L + +GL +IP
Sbjct: 138 GVLSVVATASPFIGLFGTVWGIMNAFGRIAAAGNTNLTTVAPAIAEALFATAVGLAAAIP 197
Query: 192 SSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+ IAYNKF D+ KF ++E FA++ A ++R+
Sbjct: 198 AYIAYNKFSIDAGKFTGRLESFADDLQAAVARR 230
>gi|119896711|ref|YP_931924.1| translocation protein TolQ [Azoarcus sp. BH72]
gi|119669124|emb|CAL93037.1| translocation protein TolQ [Azoarcus sp. BH72]
Length = 224
Score = 122 bits (306), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 72/222 (32%), Positives = 114/222 (51%), Gaps = 12/222 (5%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+SI +L Q + V+ ++ +L S++SW I +K R + EFE+ FWSG L
Sbjct: 6 DLSIISLITQASVLVQLVMAMLAGLSVMSWYWIFRKWFQIRAARSKTTEFERDFWSGGDL 65
Query: 70 ETVCKSLK--NHHNIGLAAIFMSAMSEWKK----SCDKGARSPIGIQDRIDRMMDVAIAR 123
+ +S HH G+ IF S E+ K S D GA D R M R
Sbjct: 66 NALFQSASAARHHTGGMERIFESGYREYNKLRAKSHDHGA-----TIDGARRAMRATFQR 120
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISI 182
E++++ L+FL S+ S +G+ G V G+M F+ ++ + + + PGI E+L++
Sbjct: 121 EVDDLEAHLAFLASVGSVSPYIGLFGTVWGIMNAFRGLSNVGTATLTQVAPGIAEALVAT 180
Query: 183 LLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+GL +IP+ +AYN+F D + ++ E F EFS IL R
Sbjct: 181 AIGLFAAIPAVVAYNRFAHDIDRIGIRFESFMEEFSNILQRN 222
>gi|71909665|ref|YP_287252.1| MotA/TolQ/ExbB proton channel [Dechloromonas aromatica RCB]
gi|71849286|gb|AAZ48782.1| Cell division and transport-associated protein TolQ [Dechloromonas
aromatica RCB]
Length = 225
Score = 122 bits (306), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 73/218 (33%), Positives = 109/218 (50%), Gaps = 3/218 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+SI L +Q V+ ++ LL S +SW I K + R + FE+ FWSG L
Sbjct: 6 DLSILHLILQASAVVQAVMALLAGVSFMSWYYIFMKLFSVKQARSKTETFERDFWSGGDL 65
Query: 70 ETVCKSLKN--HHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ S N HH + IF + E+ K + P I D R M RE++
Sbjct: 66 NNLYNSAVNDRHHAGSMERIFEAGFREFTKLKGQKNLDPKDIVDGSRRAMRATYQREMDA 125
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ LSFL S+ S +G+ G V G+M F+ ++ + S+ PGI E+L++ +GL
Sbjct: 126 LESHLSFLASVGSVSPYIGLFGTVWGIMHAFRGLSNVGQATLASVAPGIAEALVATAIGL 185
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+IP+ +AYN+F D + A + E F EFS IL RQ
Sbjct: 186 FAAIPAVLAYNRFSHDIDRLATRYESFMEEFSNILQRQ 223
>gi|170691328|ref|ZP_02882493.1| protein TolQ [Burkholderia graminis C4D1M]
gi|295675615|ref|YP_003604139.1| protein TolQ [Burkholderia sp. CCGE1002]
gi|307728554|ref|YP_003905778.1| protein TolQ [Burkholderia sp. CCGE1003]
gi|323524841|ref|YP_004226994.1| protein TolQ [Burkholderia sp. CCGE1001]
gi|170143533|gb|EDT11696.1| protein TolQ [Burkholderia graminis C4D1M]
gi|295435458|gb|ADG14628.1| protein TolQ [Burkholderia sp. CCGE1002]
gi|307583089|gb|ADN56487.1| protein TolQ [Burkholderia sp. CCGE1003]
gi|323381843|gb|ADX53934.1| protein TolQ [Burkholderia sp. CCGE1001]
Length = 225
Score = 122 bits (306), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 78/220 (35%), Positives = 118/220 (53%), Gaps = 3/220 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+SI +L + L + ++ LL + S+LSW+ I +K R Q FE+ FWSG L
Sbjct: 6 DLSIVSLVLNASLLAQAVMALLLLLSLLSWTFIFRKWFAIRRARAQTERFERDFWSGGDL 65
Query: 70 ETVCKSL-KNHHNIG-LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + +S N H IG L IF S M E+ K +K P I D R M A RE++
Sbjct: 66 QALYQSAANNRHTIGALERIFESGMREFLKGKEKRLNDPGAILDGARRAMRAAFQREMDV 125
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ L+FL S+ S +G+ G V G+M F+ +A + ++ PGI E+L + +GL
Sbjct: 126 LEANLAFLASVGSVSPYIGLFGTVWGIMNAFRGLANVQQATLANVAPGIAEALTATAIGL 185
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ +AYN++ D + A++ E F EFS IL RQ
Sbjct: 186 FAAIPAVVAYNRYAHDIDRLAIRFETFIEEFSNILQRQAH 225
>gi|94496184|ref|ZP_01302762.1| MotA/TolQ/ExbB proton channel [Sphingomonas sp. SKA58]
gi|94424363|gb|EAT09386.1| MotA/TolQ/ExbB proton channel [Sphingomonas sp. SKA58]
Length = 234
Score = 122 bits (305), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 121/219 (55%), Gaps = 2/219 (0%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
IS ALF+Q + VK ++ L + SI +W++II SV ++ R+FE FW + ++
Sbjct: 16 ISPLALFLQADIVVKGVMIGLLLASIWTWAMIIGFSVTLRKASKESRKFEADFWKAEDID 75
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
++ + + A + + ++EW++S + G +DR+ +M IA E++ +++
Sbjct: 76 RFYEA-RGKGSFPAAKVMAAGVTEWRRSTAQKVIDREGTRDRLSTVMSSTIASEVDRLSD 134
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVS 189
+L+ L ++ S VG+ G V G+M F SIA ++++ V PGI E+L + +GL +
Sbjct: 135 RLNILATIGSVAPFVGLFGTVWGIMRAFTSIAAEQNSSLAVVAPGIAEALFATAIGLFAA 194
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
IP+ IAYN+F + M FA+ F + LSR+ E
Sbjct: 195 IPAVIAYNRFSHGINRLEAAMTRFADGFYSTLSRELEAQ 233
>gi|239947582|ref|ZP_04699335.1| protein TolQ [Rickettsia endosymbiont of Ixodes scapularis]
gi|239921858|gb|EER21882.1| protein TolQ [Rickettsia endosymbiont of Ixodes scapularis]
Length = 241
Score = 122 bits (305), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 75/202 (37%), Positives = 117/202 (57%), Gaps = 3/202 (1%)
Query: 25 KCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGL 84
K ++ +L I SI SW++I K ++R+ + FE +FWSG LE + +S+K N L
Sbjct: 33 KSVMLMLLIASIWSWAIIWDKIFKLAQVQRRMKNFENVFWSGGVLEQLYESIKRSVNNPL 92
Query: 85 AAIFMSAMSEWKKSCDKGARSPI--GIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAG 142
A IF+SAM E K KG + ++RI M +A RE+E++ + LSFL ++ S+
Sbjct: 93 ALIFVSAMDECKSLSIKGLSDALKNNHKERITNSMYLAQNREVEKLEKNLSFLATVGSSA 152
Query: 143 LLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIE 201
VG+ G V G+M FQSIA + ++ V PGI E+L++ +GL +IP+ I YN I
Sbjct: 153 PFVGLFGTVWGIMHSFQSIANSKNTSLAVVAPGIAEALLATAIGLFAAIPAVIFYNYLIS 212
Query: 202 DSKKFAMQMEGFANEFSAILSR 223
++E F +E ++ILS+
Sbjct: 213 RITLINNKIEDFISELNSILSK 234
>gi|332993886|gb|AEF03941.1| tolQ protein [Alteromonas sp. SN2]
Length = 230
Score = 121 bits (304), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 72/217 (33%), Positives = 112/217 (51%), Gaps = 3/217 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D++ LF+Q V+ ++ LL S+ SW+ I Q+S + R + R+FE FWSG L
Sbjct: 4 DLTFIGLFLQASFIVQLVMLLLLGVSVASWTFIFQRSKALSSAREEMRQFEDKFWSGADL 63
Query: 70 ETVCKSLKNHHNI-GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ + L N+ G+ IF + E+ + K I D R M V ++R++EE+
Sbjct: 64 NRLYQELSARPNLSGIGTIFCAGFKEFVR-LRKSNTGTNAIVDGTYRSMRVTMSRQVEEL 122
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLC 187
+L FL + S +G+ G V G+M F ++ + + PGI E+LI+ +GL
Sbjct: 123 ESRLPFLATAGSISPYIGLFGTVWGIMNAFIALGEVQQATLAMVAPGIAEALIATAIGLF 182
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+IP+ IAYN+F +K F EFSAIL RQ
Sbjct: 183 AAIPAVIAYNRFSHQVEKLENSYGNFMEEFSAILHRQ 219
>gi|27365497|ref|NP_761025.1| protein TolQ [Vibrio vulnificus CMCP6]
gi|37680462|ref|NP_935071.1| tol biopolymer transport system, TolQ protein [Vibrio vulnificus
YJ016]
gi|320155879|ref|YP_004188258.1| motA/TolQ/ExbB proton channel family protein [Vibrio vulnificus
MO6-24/O]
gi|27361645|gb|AAO10552.1| protein TolQ [Vibrio vulnificus CMCP6]
gi|37199210|dbj|BAC95042.1| tol biopolymer transport system, TolQ protein [Vibrio vulnificus
YJ016]
gi|319931191|gb|ADV86055.1| motA/TolQ/ExbB proton channel family protein [Vibrio vulnificus
MO6-24/O]
Length = 227
Score = 121 bits (304), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 73/219 (33%), Positives = 116/219 (52%), Gaps = 5/219 (2%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
DISI LF+Q L VK ++ L S++SW++II++S + EFE FWSG L
Sbjct: 4 DISILDLFLQASLLVKLVMLTLLGMSVVSWAMIIKRSKVLSKAAKDAEEFEDKFWSGIDL 63
Query: 70 ETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + +K + G IF + +E+ + SP + + R M VA++RE++E
Sbjct: 64 SQLYQQIKARKDELSGTEEIFYAGFTEFARLRKTNPTSPDFVMEGTGRAMRVAVSREVDE 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI--PGIIESLISILLG 185
+ L FL ++ S +G+ G V G+M F ++ G +S+ PGI E+LI+ +G
Sbjct: 124 LETSLPFLATVGSITPYIGLFGTVWGIMHAFIAL-GEVKQATLSMVAPGIAEALIATAMG 182
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
L +IP+ +AYN+F K F+ EF +IL RQ
Sbjct: 183 LFAAIPAVMAYNRFASKVGKLEHNYSTFSEEFHSILHRQ 221
>gi|323495164|ref|ZP_08100249.1| hypothetical protein VIBR0546_08520 [Vibrio brasiliensis LMG 20546]
gi|323310604|gb|EGA63783.1| hypothetical protein VIBR0546_08520 [Vibrio brasiliensis LMG 20546]
Length = 231
Score = 121 bits (304), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 71/218 (32%), Positives = 115/218 (52%), Gaps = 3/218 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
DIS+ LF+Q L VK ++ +L SI+SW++II++S ++ FE FWSG L
Sbjct: 4 DISMLDLFLQASLLVKMVMLILLGMSIVSWAMIIKRSKVLSQASKEAETFEDKFWSGTDL 63
Query: 70 ETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ ++ K + G IF S +E+ + A SP I + R M VA+ARE+++
Sbjct: 64 SILYQNAKKRKDDLAGTEEIFYSGFTEFARLRKSNADSPDFIMEGTGRAMRVAVAREVDD 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ L FL ++ S +G+ G V G+M F ++ + + PGI E+L++ +GL
Sbjct: 124 LETNLPFLATVGSISPYIGLFGTVWGIMHAFIALGEVKQATLAMVAPGIAEALVATAMGL 183
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+IP+ +AYN+ K F+ EF +IL RQ
Sbjct: 184 FAAIPAVMAYNRLSNKVGKLEHNYATFSEEFHSILHRQ 221
>gi|257465519|ref|ZP_05629890.1| colicin transport protein TolQ [Actinobacillus minor 202]
gi|257451179|gb|EEV25222.1| colicin transport protein TolQ [Actinobacillus minor 202]
Length = 226
Score = 121 bits (304), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 112/216 (51%), Gaps = 3/216 (1%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLET 71
+ +LF Q + VK +I +L FS+LSW++IIQ+S + FE FWSG+ L
Sbjct: 6 DLVSLFAQASIVVKIVILILIAFSVLSWAIIIQRSRTLTKANKDSLAFEDKFWSGEDLNR 65
Query: 72 VCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+ + L+N + G IF E+ + + +P I R M++A+ RE+E +
Sbjct: 66 LHEGLENRRDGLNGSEQIFYVGFKEFSRLQNANPEAPEAIIQGTSRAMNLALNREVEGLE 125
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCV 188
+ FLG++ S +G+ G V G+M F ++ + S+ PGI E+LI+ +GL
Sbjct: 126 SYIPFLGTVGSISPYIGLFGTVWGIMHSFMGLSAVKQATLQSVAPGIAEALIATAIGLFA 185
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+IP+ +AYN+ K F +EF+ IL RQ
Sbjct: 186 AIPAVMAYNRLNLRVNKLEQNYANFIDEFTTILHRQ 221
>gi|240948552|ref|ZP_04752925.1| colicin transport protein TolQ [Actinobacillus minor NM305]
gi|240297060|gb|EER47631.1| colicin transport protein TolQ [Actinobacillus minor NM305]
Length = 226
Score = 121 bits (303), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 112/216 (51%), Gaps = 3/216 (1%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLET 71
+ +LF Q + VK +I +L FS+LSW++IIQ+S + FE FWSG+ L
Sbjct: 6 DLVSLFAQASIVVKIVILILIAFSVLSWAIIIQRSRTLTKANKDSLAFEDKFWSGEDLNR 65
Query: 72 VCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+ + L+N + G IF E+ + + +P I R M++A+ RE+E +
Sbjct: 66 LHEGLENRRDGLNGSEQIFYVGFKEFSRLQNANPEAPEAIIQGTSRAMNLALNREVEGLE 125
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCV 188
+ FLG++ S +G+ G V G+M F ++ + S+ PGI E+LI+ +GL
Sbjct: 126 SYIPFLGTVGSISPYIGLFGTVWGIMHSFMGLSAVKQATLQSVAPGIAEALIATAIGLFA 185
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+IP+ +AYN+ K F +EF+ IL RQ
Sbjct: 186 AIPAVMAYNRLNLRVNKLEQNYANFIDEFTTILHRQ 221
>gi|260768869|ref|ZP_05877803.1| MotA/TolQ/ExbB proton channel family protein [Vibrio furnissii CIP
102972]
gi|260616899|gb|EEX42084.1| MotA/TolQ/ExbB proton channel family protein [Vibrio furnissii CIP
102972]
gi|315180562|gb|ADT87476.1| TolQ protein [Vibrio furnissii NCTC 11218]
Length = 227
Score = 121 bits (303), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 113/218 (51%), Gaps = 3/218 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
DISI LF+Q VK ++ +L SI+SW++II++S R FE FWSG L
Sbjct: 4 DISILDLFLQASFLVKVVMLILLGMSIVSWAMIIKRSKVLSQAARSAEAFEDKFWSGTDL 63
Query: 70 ETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + +K + G IF S +E+ + A SP + + R M V++ARE+++
Sbjct: 64 SVLYQDVKKRKDEIAGTEEIFYSGFTEFARLRKTNAASPDYVMEGTGRAMRVSVAREVDD 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ L FL ++ S +G+ G V G+M F ++ + + PGI E+L++ +GL
Sbjct: 124 LETNLPFLATVGSISPYIGLFGTVWGIMHAFIALGQVKQATLAMVAPGIAEALVATAMGL 183
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+IP+ +AYN+ K F+ EF +IL RQ
Sbjct: 184 FAAIPAVMAYNRLSNKVSKLEHGYATFSEEFHSILHRQ 221
>gi|206580447|ref|YP_002239641.1| protein TolQ [Klebsiella pneumoniae 342]
gi|238893773|ref|YP_002918507.1| colicin uptake protein TolQ [Klebsiella pneumoniae NTUH-K2044]
gi|288936482|ref|YP_003440541.1| protein TolQ [Klebsiella variicola At-22]
gi|290510461|ref|ZP_06549831.1| TolQ [Klebsiella sp. 1_1_55]
gi|206569505|gb|ACI11281.1| protein TolQ [Klebsiella pneumoniae 342]
gi|238546089|dbj|BAH62440.1| inner membrane protein [Klebsiella pneumoniae subsp. pneumoniae
NTUH-K2044]
gi|288891191|gb|ADC59509.1| protein TolQ [Klebsiella variicola At-22]
gi|289777177|gb|EFD85175.1| TolQ [Klebsiella sp. 1_1_55]
Length = 230
Score = 121 bits (303), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 117/220 (53%), Gaps = 3/220 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
+ D++I LF++ L VK I+ +L FSI SW++IIQ++ + R+ FE FWSG
Sbjct: 1 MTDMNILDLFLKASLLVKLIMLILIGFSIASWAIIIQRTRILNSAAREAEAFEDKFWSGI 60
Query: 68 SLETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
L + + + + G IF S E+ + + +P I + R M +++ REL
Sbjct: 61 ELSRLYQESQGRRDNLTGSEQIFYSGFKEFARLHRANSHAPEAIVEGASRAMRISMNREL 120
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILL 184
E + + FLG++ S +G+ G V G+M F ++ + + PGI E+LI+ +
Sbjct: 121 ETLETHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMVAPGIAEALIATAI 180
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
GL +IP+ +AYN+ + K + + F EF+AIL RQ
Sbjct: 181 GLFAAIPAVMAYNRLNQRVNKLELNYDNFMEEFTAILHRQ 220
>gi|301155735|emb|CBW15203.1| membrane spanning protein in TolA-TolQ-TolR complex [Haemophilus
parainfluenzae T3T1]
Length = 228
Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 116/221 (52%), Gaps = 3/221 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
+++ LF++ + V+ +I +L FSI+SW++IIQ+S T ++ FE FWSG+ L
Sbjct: 4 ELNFLDLFLKASIVVQLVIVILISFSIISWAIIIQRSRILTTALKEANTFEDRFWSGEDL 63
Query: 70 ETVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ L N + G IF E+ + A +P I R M++A+ RE+E
Sbjct: 64 NKLYDGLSNRREVLTGSEQIFFVGFKEFSRLKQVNANAPEAIIKGTTRAMNLAMNREVEA 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ ++ FL +++S +G+ G V G+M F +++G + + PGI E+LI+ +GL
Sbjct: 124 LESRVPFLATVASVSPYIGLFGTVWGIMHAFMALSGAKQATLQMVAPGIAEALIATAIGL 183
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEG 227
+IP+ +AYN+ F +EF+ IL RQ G
Sbjct: 184 FAAIPAVMAYNRLSLRVNAIEQNYGNFIDEFTTILHRQAFG 224
>gi|117923785|ref|YP_864402.1| MotA/TolQ/ExbB proton channel [Magnetococcus sp. MC-1]
gi|117607541|gb|ABK42996.1| Cell division and transport-associated protein TolQ [Magnetococcus
sp. MC-1]
Length = 230
Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 120/219 (54%), Gaps = 5/219 (2%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLET 71
S+F L Q G V+ ++ L S++SW++I K + + + FE+ FWSG S+ +
Sbjct: 5 SVFDLITQAGPLVQLVMLALLAASVVSWAIIFDKWRRYRRITQDAEAFEERFWSGGSVAS 64
Query: 72 VCKS-LKNHHNIGLAAIFMSAMSEWKK--SCDKGARSPIG-IQDRIDRMMDVAIARELEE 127
+ +S K + + +F + EWK+ S + + G + + R M VA+ RELE
Sbjct: 65 LFQSATKEWPDSPMVVMFSAGFREWKRWESNEPTSEGDGGDLVTNVRRAMTVALNRELEN 124
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ + L+FL ++ S VG+ G V G+M F + G ++ + + PGI E+LI+ +GL
Sbjct: 125 LEKGLTFLATVGSTSPFVGLFGTVWGIMNAFLGLTGAKASTLTMVAPGIAEALIATAMGL 184
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IPS IAYNK+ + ++ +M+ F EF IL R++
Sbjct: 185 VAAIPSVIAYNKYSSEMRRLHAKMDNFGAEFLNILERRS 223
>gi|238650758|ref|YP_002916612.1| tolQ protein [Rickettsia peacockii str. Rustic]
gi|238624856|gb|ACR47562.1| tolQ protein [Rickettsia peacockii str. Rustic]
Length = 241
Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/202 (36%), Positives = 117/202 (57%), Gaps = 3/202 (1%)
Query: 25 KCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGL 84
K ++ +L I SI SW++I+ K + +++ R FE +FWSG LE + +S+K N L
Sbjct: 33 KSVMLMLLIASIWSWAIILDKIFKLVQVQKSMRAFENVFWSGGVLEQLYESIKRSVNNPL 92
Query: 85 AAIFMSAMSEWKKSCDKGARSPI--GIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAG 142
A IF+SAM E K KG + ++RI M +A R +E++ + LSFL ++ S+
Sbjct: 93 ALIFVSAMDECKSLSTKGLSEGLKNNHKERITGAMYLAQNRAVEKLEKNLSFLATVGSSA 152
Query: 143 LLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIE 201
VG+ G V G+M FQSIA + ++ V PGI E+L++ +GL +IP+ I YN I
Sbjct: 153 PFVGLFGTVWGIMHSFQSIATSKNTSLAVVAPGIAEALLATAIGLFAAIPAVIFYNYLIS 212
Query: 202 DSKKFAMQMEGFANEFSAILSR 223
++E F +E ++ILS+
Sbjct: 213 RITLINNKIEDFISELNSILSK 234
>gi|108755183|emb|CAK32575.1| putative biopolymer transport protein [uncultured organism]
Length = 152
Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 60/148 (40%), Positives = 95/148 (64%), Gaps = 5/148 (3%)
Query: 84 LAAIFMSAMSEWKKSCDKG----ARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMS 139
++A+F++AM EW++S KG + +Q+RI+R+M +A REL+ ++FL S
Sbjct: 2 MSAVFVTAMQEWRRSLAKGLTQNESTRASLQERIERVMQIATVRELDRAERNMTFLASTG 61
Query: 140 SAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCVSIPSSIAYNK 198
+ +G+ G V G+M FQSIA + ++V + PGI E+L + LGL +IP+ +AYNK
Sbjct: 62 ATAPFIGLFGTVWGIMNSFQSIALSKNTSLVVVAPGIAEALFATALGLLAAIPAVVAYNK 121
Query: 199 FIEDSKKFAMQMEGFANEFSAILSRQTE 226
+D ++A +++ FA EFSAILSRQ E
Sbjct: 122 LSKDLTRYADRLDSFAGEFSAILSRQME 149
>gi|22126934|ref|NP_670357.1| colicin uptake protein TolQ [Yersinia pestis KIM 10]
gi|45440869|ref|NP_992408.1| colicin uptake protein TolQ [Yersinia pestis biovar Microtus str.
91001]
gi|51595500|ref|YP_069691.1| colicin uptake protein TolQ [Yersinia pseudotuberculosis IP 32953]
gi|108806596|ref|YP_650512.1| colicin uptake protein TolQ [Yersinia pestis Antiqua]
gi|108813037|ref|YP_648804.1| colicin uptake protein TolQ [Yersinia pestis Nepal516]
gi|145599840|ref|YP_001163916.1| colicin uptake protein TolQ [Yersinia pestis Pestoides F]
gi|149366879|ref|ZP_01888913.1| TolQ colicin import protein [Yersinia pestis CA88-4125]
gi|153950907|ref|YP_001401834.1| colicin uptake protein TolQ [Yersinia pseudotuberculosis IP 31758]
gi|162420513|ref|YP_001605919.1| colicin uptake protein TolQ [Yersinia pestis Angola]
gi|165924350|ref|ZP_02220182.1| protein TolQ [Yersinia pestis biovar Orientalis str. F1991016]
gi|165938371|ref|ZP_02226929.1| protein TolQ [Yersinia pestis biovar Orientalis str. IP275]
gi|166011568|ref|ZP_02232466.1| protein TolQ [Yersinia pestis biovar Antiqua str. E1979001]
gi|166211429|ref|ZP_02237464.1| protein TolQ [Yersinia pestis biovar Antiqua str. B42003004]
gi|167399737|ref|ZP_02305255.1| protein TolQ [Yersinia pestis biovar Antiqua str. UG05-0454]
gi|167419441|ref|ZP_02311194.1| protein TolQ [Yersinia pestis biovar Orientalis str. MG05-1020]
gi|167423896|ref|ZP_02315649.1| protein TolQ [Yersinia pestis biovar Mediaevalis str. K1973002]
gi|218928289|ref|YP_002346164.1| colicin uptake protein TolQ [Yersinia pestis CO92]
gi|229841058|ref|ZP_04461217.1| membrane spanning protein in TolA-TolQ-TolR complex [Yersinia
pestis biovar Orientalis str. PEXU2]
gi|229843162|ref|ZP_04463308.1| membrane spanning protein in TolA-TolQ-TolR complex [Yersinia
pestis biovar Orientalis str. India 195]
gi|229893999|ref|ZP_04509185.1| membrane spanning protein in TolA-TolQ-TolR complex [Yersinia
pestis Pestoides A]
gi|229903477|ref|ZP_04518590.1| membrane spanning protein in TolA-TolQ-TolR complex [Yersinia
pestis Nepal516]
gi|270487258|ref|ZP_06204332.1| protein TolQ [Yersinia pestis KIM D27]
gi|294503126|ref|YP_003567188.1| TolQ colicin import protein [Yersinia pestis Z176003]
gi|21959974|gb|AAM86608.1|AE013907_2 inner membrane protein [Yersinia pestis KIM 10]
gi|45435727|gb|AAS61285.1| TolQ colicin import protein [Yersinia pestis biovar Microtus str.
91001]
gi|51588782|emb|CAH20396.1| TolQ colicin import protein [Yersinia pseudotuberculosis IP 32953]
gi|108776685|gb|ABG19204.1| TolQ colicin import protein [Yersinia pestis Nepal516]
gi|108778509|gb|ABG12567.1| TolQ colicin import protein [Yersinia pestis Antiqua]
gi|115346900|emb|CAL19787.1| TolQ colicin import protein [Yersinia pestis CO92]
gi|145211536|gb|ABP40943.1| TolQ colicin import protein [Yersinia pestis Pestoides F]
gi|149291253|gb|EDM41328.1| TolQ colicin import protein [Yersinia pestis CA88-4125]
gi|152962402|gb|ABS49863.1| protein TolQ [Yersinia pseudotuberculosis IP 31758]
gi|162353328|gb|ABX87276.1| protein TolQ [Yersinia pestis Angola]
gi|165913749|gb|EDR32368.1| protein TolQ [Yersinia pestis biovar Orientalis str. IP275]
gi|165923410|gb|EDR40542.1| protein TolQ [Yersinia pestis biovar Orientalis str. F1991016]
gi|165989516|gb|EDR41817.1| protein TolQ [Yersinia pestis biovar Antiqua str. E1979001]
gi|166207200|gb|EDR51680.1| protein TolQ [Yersinia pestis biovar Antiqua str. B42003004]
gi|166962182|gb|EDR58203.1| protein TolQ [Yersinia pestis biovar Orientalis str. MG05-1020]
gi|167050445|gb|EDR61853.1| protein TolQ [Yersinia pestis biovar Antiqua str. UG05-0454]
gi|167056745|gb|EDR66508.1| protein TolQ [Yersinia pestis biovar Mediaevalis str. K1973002]
gi|229679247|gb|EEO75350.1| membrane spanning protein in TolA-TolQ-TolR complex [Yersinia
pestis Nepal516]
gi|229689509|gb|EEO81570.1| membrane spanning protein in TolA-TolQ-TolR complex [Yersinia
pestis biovar Orientalis str. India 195]
gi|229697424|gb|EEO87471.1| membrane spanning protein in TolA-TolQ-TolR complex [Yersinia
pestis biovar Orientalis str. PEXU2]
gi|229703884|gb|EEO90897.1| membrane spanning protein in TolA-TolQ-TolR complex [Yersinia
pestis Pestoides A]
gi|262361162|gb|ACY57883.1| TolQ colicin import protein [Yersinia pestis D106004]
gi|262365282|gb|ACY61839.1| TolQ colicin import protein [Yersinia pestis D182038]
gi|270335762|gb|EFA46539.1| protein TolQ [Yersinia pestis KIM D27]
gi|294353585|gb|ADE63926.1| TolQ colicin import protein [Yersinia pestis Z176003]
gi|320014261|gb|ADV97832.1| membrane spanning protein in TolA-TolQ-TolR complex [Yersinia
pestis biovar Medievalis str. Harbin 35]
Length = 228
Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/219 (32%), Positives = 112/219 (51%), Gaps = 3/219 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D++I LF+Q L VK I+ +L FSI SW++IIQ++ R FE FWSG L
Sbjct: 3 DMNILDLFLQASLFVKLIMLVLMGFSIASWAIIIQRTRILNAATRDAEAFEDKFWSGIEL 62
Query: 70 ETVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + + + G IF S E+ + + +P + D R M +++ RELE
Sbjct: 63 SRLYQESQARRDTLSGSEQIFHSGFKEFARLHRANSHAPEAVIDGASRAMRISMNRELEA 122
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ + FLG++ S +G+ G V G+M F S+ + + PGI E+LI+ +GL
Sbjct: 123 LETHIPFLGTVGSISPYIGLFGTVWGIMHAFISLGAVKQATLQMVAPGIAEALIATAIGL 182
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ +AYN+ + K + F EF AIL RQ
Sbjct: 183 FAAIPAVMAYNRLNQHVNKLEQNYDNFMEEFIAILHRQA 221
>gi|160872695|ref|ZP_02062827.1| protein TolQ [Rickettsiella grylli]
gi|159121494|gb|EDP46832.1| protein TolQ [Rickettsiella grylli]
Length = 233
Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 117/227 (51%), Gaps = 4/227 (1%)
Query: 6 LAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS 65
++ +D S+++ F VKC++ +L + SILSWS+I Q R++ +FE FWS
Sbjct: 1 MSTIDPSLWSYFSAASGIVKCVMFILLVASILSWSMIFQYGFILRRSRKRLAQFENKFWS 60
Query: 66 GQSLETVCKSL--KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAR 123
G L + L + GLA+IF + E+ + + P I + + R M +A +
Sbjct: 61 GIELSKLYTELNREQEQQNGLASIFHAGFREFVRLDQHVSDVPAVIMEGVQRAMRIAYSE 120
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI--PGIIESLIS 181
+ + + + L FL ++ S +G+ G V G+M F +++ +++ PGI E+L++
Sbjct: 121 QHQLLEKHLDFLATLGSTSPYIGLFGTVWGIMTAFHALSASQQTATIAMVAPGIAEALVA 180
Query: 182 ILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
+GL V+IP+ I YN++ + F EFS IL RQ GN
Sbjct: 181 TAMGLFVAIPAVIFYNRYAHQIQHLLHHYHRFQEEFSTILYRQIHGN 227
>gi|114319407|ref|YP_741090.1| MotA/TolQ/ExbB proton channel [Alkalilimnicola ehrlichii MLHE-1]
gi|114225801|gb|ABI55600.1| Cell division and transport-associated protein TolQ
[Alkalilimnicola ehrlichii MLHE-1]
Length = 235
Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 119/221 (53%), Gaps = 3/221 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
++SI L ++ L V+ ++ +L + S+ SW++I K FE+ FWSG +L
Sbjct: 4 ELSITHLVLEASLLVQLVMLILVLASVSSWALIFLKRATIRKAHDGAVHFEERFWSGGNL 63
Query: 70 ETVCKSLKNHH--NIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + ++ H + GL IF S E+ + + +P + + R M V+++RE+++
Sbjct: 64 AEIYRQIREPHPDHGGLERIFRSGFKEFTRMRKQTGTAPGTMVEASHRAMRVSLSREMDD 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ L FL ++ S VG+ G V G+M F+++ + ++ PGI E+LI+ LGL
Sbjct: 124 LERHLPFLATVGSVSPYVGLFGTVWGIMNSFRALGEMQQATLATVAPGIAEALIATALGL 183
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEG 227
+IP+ IAYN++ ++ + E F EF++IL R T G
Sbjct: 184 FAAIPAVIAYNQYANQVERLINRYETFVEEFTSILQRNTHG 224
>gi|296103333|ref|YP_003613479.1| colicin uptake protein TolQ [Enterobacter cloacae subsp. cloacae
ATCC 13047]
gi|295057792|gb|ADF62530.1| colicin uptake protein TolQ [Enterobacter cloacae subsp. cloacae
ATCC 13047]
Length = 230
Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 119/228 (52%), Gaps = 7/228 (3%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
+ D++I LF++ L VK I+ +L FSI SW++IIQ++ R+ FE FWSG
Sbjct: 1 MTDMNILDLFLKASLLVKLIMLILIGFSIASWAIIIQRTRILNAAGREAEAFEDKFWSGI 60
Query: 68 SLETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
L + + + + G IF S E+ + + +P + + R M +++ REL
Sbjct: 61 ELSRLYQESQGRRDSLAGSEQIFYSGFKEFARLHRANSHAPEAVVEGASRAMRISMNREL 120
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILL 184
E + + FLG++ S +G+ G V G+M F ++ + + PGI E+LI+ +
Sbjct: 121 ENLETHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMVAPGIAEALIATAI 180
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ----TEGN 228
GL +IP+ +AYN+ + K + + F EF+AIL RQ TE N
Sbjct: 181 GLFAAIPAVMAYNRLNQRVNKLELNYDNFMEEFTAILHRQAFTSTESN 228
>gi|332530155|ref|ZP_08406104.1| transmembrane protein/ biopolymer transport [Hylemonella gracilis
ATCC 19624]
gi|332040425|gb|EGI76802.1| transmembrane protein/ biopolymer transport [Hylemonella gracilis
ATCC 19624]
Length = 231
Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 112/221 (50%), Gaps = 2/221 (0%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D SI L + V+ ++ +L SI SW+ I K +R +FEQ FWSG +L
Sbjct: 4 DFSIIQLVLHASWVVQAVMLILLCGSIASWAAIFSKHFGLKKVRASNEKFEQDFWSGANL 63
Query: 70 ETVCKSLKNHHNIG-LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
T+ + G + IF++ + E++K ++ + D R M ++ RE++ +
Sbjct: 64 NTLYAQAAQKSDSGPMERIFVAGLREYQKLRERRVTDNSALLDGARRAMRASMQREMDSV 123
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLC 187
LSFL ++ S +G+ G V G+M F +A + ++ PGI E+L++ +GL
Sbjct: 124 ESNLSFLATVGSVSPYIGLFGTVWGIMHAFTGLASMQQVTLATVAPGIAEALVATAIGLF 183
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
+IP+ +AYN+F D + A +E F EFS IL R G
Sbjct: 184 AAIPAVVAYNRFARDIDRVANAVETFIEEFSNILQRNISGQ 224
>gi|123443149|ref|YP_001007123.1| colicin uptake protein TolQ [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|238757965|ref|ZP_04619146.1| hypothetical protein yaldo0001_8410 [Yersinia aldovae ATCC 35236]
gi|238765248|ref|ZP_04626177.1| hypothetical protein ykris0001_32630 [Yersinia kristensenii ATCC
33638]
gi|238790495|ref|ZP_04634264.1| hypothetical protein yfred0001_12250 [Yersinia frederiksenii ATCC
33641]
gi|332160926|ref|YP_004297503.1| colicin uptake protein TolQ [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|122090110|emb|CAL12973.1| TolQ colicin import protein [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|238696520|gb|EEP89308.1| hypothetical protein ykris0001_32630 [Yersinia kristensenii ATCC
33638]
gi|238703719|gb|EEP96255.1| hypothetical protein yaldo0001_8410 [Yersinia aldovae ATCC 35236]
gi|238721439|gb|EEQ13110.1| hypothetical protein yfred0001_12250 [Yersinia frederiksenii ATCC
33641]
gi|318604833|emb|CBY26331.1| mota/TolQ/ExbB proton channel family protein [Yersinia
enterocolitica subsp. palearctica Y11]
gi|325665156|gb|ADZ41800.1| colicin uptake protein TolQ [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|330864062|emb|CBX74139.1| protein tolQ [Yersinia enterocolitica W22703]
Length = 228
Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/219 (32%), Positives = 112/219 (51%), Gaps = 3/219 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D++I LF+Q L VK I+ +L FSI SW++IIQ++ R FE FWSG L
Sbjct: 3 DMNILDLFLQASLFVKLIMLVLMGFSIASWAIIIQRTRILNAATRDAEAFEDKFWSGIEL 62
Query: 70 ETVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + + + G IF S E+ + + +P + D R M +++ RELE
Sbjct: 63 SRLYQESQARRDTLGGSEQIFHSGFKEFARLHRANSHAPEAVIDGASRAMRISMNRELEA 122
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ + FLG++ S +G+ G V G+M F S+ + + PGI E+LI+ +GL
Sbjct: 123 LETHIPFLGTVGSISPYIGLFGTVWGIMHAFISLGAVKQATLQMVAPGIAEALIATAIGL 182
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ +AYN+ + K + F EF AIL RQ
Sbjct: 183 FAAIPAVMAYNRLNQRVNKLEQNYDNFMEEFIAILHRQA 221
>gi|238752124|ref|ZP_04613607.1| hypothetical protein yrohd0001_520 [Yersinia rohdei ATCC 43380]
gi|238785866|ref|ZP_04629834.1| hypothetical protein yberc0001_38220 [Yersinia bercovieri ATCC
43970]
gi|238797733|ref|ZP_04641227.1| hypothetical protein ymoll0001_12410 [Yersinia mollaretii ATCC
43969]
gi|238709701|gb|EEQ01936.1| hypothetical protein yrohd0001_520 [Yersinia rohdei ATCC 43380]
gi|238713236|gb|EEQ05280.1| hypothetical protein yberc0001_38220 [Yersinia bercovieri ATCC
43970]
gi|238718374|gb|EEQ10196.1| hypothetical protein ymoll0001_12410 [Yersinia mollaretii ATCC
43969]
Length = 228
Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/219 (32%), Positives = 112/219 (51%), Gaps = 3/219 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D++I LF+Q L VK I+ +L FSI SW++IIQ++ R FE FWSG L
Sbjct: 3 DMNILDLFLQASLFVKLIMLVLMGFSIASWAIIIQRTRILNAATRDAEAFEDKFWSGIEL 62
Query: 70 ETVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + + + G IF S E+ + + +P + D R M +++ RELE
Sbjct: 63 SRLYQESQARRDTLGGSEQIFHSGFKEFARLHRANSHAPEAVIDGASRAMRISMNRELEA 122
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ + FLG++ S +G+ G V G+M F S+ + + PGI E+LI+ +GL
Sbjct: 123 LETHIPFLGTVGSISPYIGLFGTVWGIMHAFISLGAVKQATLQMVAPGIAEALIATAIGL 182
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ +AYN+ + K + F EF AIL RQ
Sbjct: 183 FAAIPAVMAYNRLNQRVNKLEQNYDNFMEEFIAILHRQA 221
>gi|260779151|ref|ZP_05888043.1| MotA/TolQ/ExbB proton channel family protein [Vibrio
coralliilyticus ATCC BAA-450]
gi|260605315|gb|EEX31610.1| MotA/TolQ/ExbB proton channel family protein [Vibrio
coralliilyticus ATCC BAA-450]
Length = 232
Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/218 (33%), Positives = 113/218 (51%), Gaps = 3/218 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
DIS+ LF+Q L VK ++ L SI+SW++II++S + FE FWSG L
Sbjct: 4 DISMLDLFLQASLLVKMVMLTLLGMSIVSWAMIIKRSKVLSQAAKGAETFEDKFWSGTDL 63
Query: 70 ETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ ++ K + G IF S +E+ + A SP I + R M VA+ARE++E
Sbjct: 64 SVLYQNAKKRKDELEGTEEIFYSGFTEFARLRKSNADSPDFIMEGTGRAMRVAVAREVDE 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ L FL ++ S +G+ G V G+M F ++ + + PGI E+L++ +GL
Sbjct: 124 LETNLPFLATVGSISPYIGLFGTVWGIMHAFIALGEVKQATLAMVAPGIAEALVATAMGL 183
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+IP+ +AYN+ K F+ EF +IL RQ
Sbjct: 184 FAAIPAVMAYNRLSNKVGKLEHNYATFSEEFHSILHRQ 221
>gi|237730718|ref|ZP_04561199.1| colicin uptake protein TolQ [Citrobacter sp. 30_2]
gi|226906257|gb|EEH92175.1| colicin uptake protein TolQ [Citrobacter sp. 30_2]
Length = 230
Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 115/218 (52%), Gaps = 3/218 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D++I LF++ L VK I+ +L FSI SW++IIQ++ R+ FE FWSG L
Sbjct: 3 DMNILDLFLKASLLVKLIMLILIGFSIASWAIIIQRTRILNAASREAEAFEDKFWSGIEL 62
Query: 70 ETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + + + G IF S E+ + + +P + + R M +++ RELE
Sbjct: 63 SRLYQESQGRRDNLAGSEQIFYSGFKEFARLHRANSHAPEAVVEGASRAMRISMNRELET 122
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ + FLG++ S +G+ G V G+M F ++ + + PGI E+LI+ +GL
Sbjct: 123 LETHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMVAPGIAEALIATAIGL 182
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+IP+ +AYN+ + K + + F EF+AIL RQ
Sbjct: 183 FAAIPAVMAYNRLNQRVNKLELNYDNFMEEFTAILHRQ 220
>gi|254362581|ref|ZP_04978678.1| TonB family auxiliary protein TolQ [Mannheimia haemolytica PHL213]
gi|261493431|ref|ZP_05989956.1| colicin transport protein, TolQ [Mannheimia haemolytica serotype A2
str. BOVINE]
gi|261496880|ref|ZP_05993248.1| colicin transport protein, TolQ [Mannheimia haemolytica serotype A2
str. OVINE]
gi|110735353|gb|ABG89247.1| TolQ [Mannheimia haemolytica]
gi|153094187|gb|EDN75074.1| TonB family auxiliary protein TolQ [Mannheimia haemolytica PHL213]
gi|261307404|gb|EEY08739.1| colicin transport protein, TolQ [Mannheimia haemolytica serotype A2
str. OVINE]
gi|261310925|gb|EEY12103.1| colicin transport protein, TolQ [Mannheimia haemolytica serotype A2
str. BOVINE]
Length = 226
Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 116/218 (53%), Gaps = 3/218 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
+ S+ +LF++ + VK ++ +L +FSILSW+VIIQ+S ++ FE FWSG+ L
Sbjct: 4 EFSLLSLFLEASIVVKIVMLILIVFSILSWAVIIQRSKILTKAKKDSLAFEDRFWSGEDL 63
Query: 70 ETVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + L+N + G IF E+ + +P I R M++A+ RE+E
Sbjct: 64 NRLHQGLENRRDALNGSEQIFYVGFKEFTRLQQANPDAPESIIQGSTRAMNLALNREMES 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ + FLG++ S +G+ G V G+M F ++ + S+ PGI E+LI+ +GL
Sbjct: 124 LENYIPFLGTVGSISPYIGLFGTVWGIMHSFMGLSAVKQATLQSVAPGIAEALIATAIGL 183
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+IP+ +AYN+ K F +EF+ +L RQ
Sbjct: 184 FAAIPAVMAYNRLNLRLGKVEQGYVNFIDEFTTLLHRQ 221
>gi|253990436|ref|YP_003041792.1| colicin uptake protein TolQ [Photorhabdus asymbiotica subsp.
asymbiotica ATCC 43949]
gi|253781886|emb|CAQ85050.1| tolq protein [Photorhabdus asymbiotica]
Length = 231
Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 113/219 (51%), Gaps = 3/219 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D++I LF++ GL V+ I+ +L FSI SW++IIQ++ R+ FE FWSG L
Sbjct: 3 DMNILDLFLKAGLLVQLIMLILICFSIASWAIIIQRTKILNAATREAEAFEDKFWSGIEL 62
Query: 70 ETVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ K ++ + G IF S E+ + +P + R M +++ RELE
Sbjct: 63 SRLYKESQSRRDSLGGTEQIFYSGFKEFARLHHANNHAPEAVVTGASRAMRISMNRELET 122
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ + FLG++ S +G+ G V G+M F ++ + + PGI E+LI+ +GL
Sbjct: 123 LESHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMVAPGIAEALIATAIGL 182
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ +AYN+ + K + F EF AIL RQ
Sbjct: 183 FAAIPAVMAYNRLNQRVNKLEQNYDNFMEEFLAILHRQA 221
>gi|330814397|ref|YP_004358636.1| motA/TolQ/ExbB proton channel family protein [Candidatus
Pelagibacter sp. IMCC9063]
gi|327487492|gb|AEA81897.1| motA/TolQ/ExbB proton channel family protein [Candidatus
Pelagibacter sp. IMCC9063]
Length = 222
Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/217 (34%), Positives = 118/217 (54%), Gaps = 6/217 (2%)
Query: 6 LAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS 65
L D SI LFM+ L VK ++ L + SI SW++II K F + ++ E FWS
Sbjct: 11 LGTTDFSILTLFMRADLVVKFVMISLVLASIFSWALIIDKIKIFKKIFKETDIAEDQFWS 70
Query: 66 GQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
+S K + + L +F + M C + +S I +R R+MDVAI +++
Sbjct: 71 SKSAGEFYKKTSSSSDNPLVVVFRAGME-----CVQDHKSKGQIVERTKRVMDVAIDKQI 125
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILL 184
E+ + L+FL ++ S VG+ G V G+M FQSIA + ++ + PGI E+L + L
Sbjct: 126 EKYEKNLTFLATVGSVAPFVGLFGTVWGIMNSFQSIAISRNTSLAIVAPGIAEALFATAL 185
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
GL +IP+ +AYNKF DS+++ ++E F F I+
Sbjct: 186 GLLAAIPAVVAYNKFSSDSRRYTQKLENFTQSFLTII 222
>gi|251793060|ref|YP_003007786.1| protein TolQ [Aggregatibacter aphrophilus NJ8700]
gi|247534453|gb|ACS97699.1| protein TolQ [Aggregatibacter aphrophilus NJ8700]
Length = 229
Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 117/221 (52%), Gaps = 3/221 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
+++ LF++ + V+ +I +L IFSI SW++IIQ+S ++ FE FWSG+ L
Sbjct: 4 ELNFLDLFLKASIVVQLVILILIIFSITSWAIIIQRSRVLTKALKESMAFEDRFWSGEDL 63
Query: 70 ETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + L N + G IF E+ + +P I R M++++ RE+E+
Sbjct: 64 NKLYEGLSNRRDGLSGSEQIFYVGFKEFSRLKQANPDAPEAIIKGSTRAMNLSMNREIED 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
I ++ FL +++S +G+ G V G+M F S++G + + PGI E+LI+ +GL
Sbjct: 124 IETRVPFLATVASISPYIGLFGTVWGIMHAFMSLSGAKQATLQMVAPGIAEALIATAIGL 183
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEG 227
+IP+ +AYN+ K F +EF+ IL RQ G
Sbjct: 184 FAAIPAVMAYNRLSLRVNKLEQNYGNFIDEFTTILHRQVFG 224
>gi|308050001|ref|YP_003913567.1| Cell division and transport-associated protein TolQ [Ferrimonas
balearica DSM 9799]
gi|307632191|gb|ADN76493.1| Cell division and transport-associated protein TolQ [Ferrimonas
balearica DSM 9799]
Length = 230
Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 120/220 (54%), Gaps = 6/220 (2%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
+IS LF++ L VK ++ L + S+ +W+VI Q+ +R+ + FE FWSG L
Sbjct: 4 EISFIGLFLEASLLVKLVMIFLLLMSVAAWTVIFQRQKALKEAQRRAQRFEDRFWSGVDL 63
Query: 70 ETVCKSL--KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + L + N GL +F + E+ + K +RS + D R M V+++RE+++
Sbjct: 64 NRLYQELSARGDQNSGLELMFTNGFKEYAR-LSKSSRSAEAVMDGSYRAMRVSLSREVDK 122
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAG--YYSNNVVSIPGIIESLISILLG 185
+ + L L ++ S +G+ G V G+M F ++ + + N+V+ PGI E+LI+ +G
Sbjct: 123 LEQHLPMLATIGSTSPYIGLFGTVWGIMNSFIALGSVQHATLNMVA-PGIAEALIATAMG 181
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
L +IP+ I +N+F +K F +EFSAIL RQ
Sbjct: 182 LFAAIPAVIFFNRFSTRVEKLENSYANFMDEFSAILHRQA 221
>gi|242238599|ref|YP_002986780.1| colicin uptake protein TolQ [Dickeya dadantii Ech703]
gi|242130656|gb|ACS84958.1| protein TolQ [Dickeya dadantii Ech703]
Length = 228
Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 113/218 (51%), Gaps = 3/218 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D++I LF++ L VK I+ +L FSI SW++IIQ++ R FE FWSG L
Sbjct: 3 DMNILDLFLKASLLVKLIMLILIGFSIASWAIIIQRTRILNAATRDAEAFEDKFWSGIEL 62
Query: 70 ETVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + ++H G IF + E+ + + +P + + R M +++ RELE
Sbjct: 63 SRLYQESQSHRETLGGTEQIFYAGFKEFARLHRANSHAPEAVVEGASRAMRISMNRELET 122
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ + FLG++ S +G+ G V G+M F ++ + + PGI E+LI+ +GL
Sbjct: 123 LETHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMVAPGIAEALIATAIGL 182
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+IP+ +AYN+ + K + F EF AIL RQ
Sbjct: 183 FAAIPAVMAYNRLNQRVNKLEQNYDNFMEEFIAILHRQ 220
>gi|254427665|ref|ZP_05041372.1| protein TolQ [Alcanivorax sp. DG881]
gi|196193834|gb|EDX88793.1| protein TolQ [Alcanivorax sp. DG881]
Length = 228
Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 113/222 (50%), Gaps = 4/222 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S+ +L + V+ ++ LL + S+ SW +I+ + R R FE+ FWS L
Sbjct: 6 DMSVVSLISHATIVVQLVMALLILASLTSWYMIVGRFRVLGRAHRAGRAFEEKFWSSDDL 65
Query: 70 ETVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
++ + ++ G AIF + E+ + K R + D R M VA+ RE
Sbjct: 66 ASLYNQSRKDPDVDSGTEAIFRAGFQEFVR-LSKSTRGAEAVMDGAQRAMRVALQREQTR 124
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
+T+ L FL ++ S VG+ G V G+M F ++A + V PGI E+LI+ +GL
Sbjct: 125 LTKHLPFLATVGSTSPYVGLFGTVWGIMNSFMALANVKQATLSVVAPGIAEALIATAIGL 184
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
+IP+ +AYN+F S + E FA EFS++L RQ G
Sbjct: 185 FAAIPAVMAYNRFSAQSDALLTENEMFAEEFSSVLHRQAHGR 226
>gi|261868495|ref|YP_003256417.1| protein TolQ [Aggregatibacter actinomycetemcomitans D11S-1]
gi|293390511|ref|ZP_06634845.1| protein TolQ [Aggregatibacter actinomycetemcomitans D7S-1]
gi|261413827|gb|ACX83198.1| protein TolQ [Aggregatibacter actinomycetemcomitans D11S-1]
gi|290951045|gb|EFE01164.1| protein TolQ [Aggregatibacter actinomycetemcomitans D7S-1]
Length = 229
Score = 119 bits (298), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 117/221 (52%), Gaps = 3/221 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
+++ LF++ + V+ +I +L IFSI SW++IIQ+S ++ FE FWSG+ L
Sbjct: 4 ELNFLDLFLKASIVVQLVILILIIFSITSWAIIIQRSRVLTKALKESMAFEDRFWSGEDL 63
Query: 70 ETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + L N + G IF E+ + +P I R M++++ RE+E+
Sbjct: 64 NKLYEGLSNRRDGLTGSEQIFYVGFKEFSRLKQANPDAPEAIIQGSTRAMNLSMNREIED 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ ++ FL +++S +G+ G V G+M F S++G + + PGI E+LI+ +GL
Sbjct: 124 LETRVPFLATVASISPYIGLFGTVWGIMHAFLSLSGAKQATLQMVAPGIAEALIATAIGL 183
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEG 227
+IP+ +AYN+ K F +EF+ IL RQ G
Sbjct: 184 FAAIPAVMAYNRLSLRVNKLEQNYGNFIDEFTTILHRQVFG 224
>gi|329888412|ref|ZP_08267010.1| protein TolQ [Brevundimonas diminuta ATCC 11568]
gi|328846968|gb|EGF96530.1| protein TolQ [Brevundimonas diminuta ATCC 11568]
Length = 262
Score = 119 bits (298), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 116/213 (54%), Gaps = 4/213 (1%)
Query: 16 LFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKS 75
LFM VK ++ L S+ SW++II K+V F + + EFE+ SG+SLE V
Sbjct: 15 LFMTADWVVKTVMIGLAAASVWSWTIIIDKAVRFSRMNARATEFEKQVESGRSLEEVAAQ 74
Query: 76 LKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIG---IQDRIDRMMDVAIARELEEITEKL 132
L + + + +W+++ +GA + + RIDR +D IARE ++I L
Sbjct: 75 AGPQPVDPLPRMLVLTLQDWREARARGAMTDTQGNMLIARIDRALDSVIARESQKIENGL 134
Query: 133 SFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCVSIP 191
L +++A +G+ G V G+M F SIA + N+ ++ P I E+L + +GL +IP
Sbjct: 135 GVLSVVATASPFIGLFGTVWGIMNAFDSIAAAGNTNLTTVAPAIAEALFATAIGLAAAIP 194
Query: 192 SSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+ IA+N F + KF ++E FA++ + ++R+
Sbjct: 195 AYIAFNAFSVSAGKFTGRLEAFADDLQSAIARR 227
>gi|261822333|ref|YP_003260439.1| colicin uptake protein TolQ [Pectobacterium wasabiae WPP163]
gi|261606346|gb|ACX88832.1| protein TolQ [Pectobacterium wasabiae WPP163]
Length = 228
Score = 119 bits (298), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 114/220 (51%), Gaps = 3/220 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
+ D+++F LF++ L VK I+ +L FSI SW++IIQ++ R+ FE FWSG
Sbjct: 1 MTDMNVFDLFLKASLLVKLIMLILICFSIASWAIIIQRTRILNAATREAEAFEDKFWSGI 60
Query: 68 SLETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
L + + + + G IF S E+ + + P + + R M +++ REL
Sbjct: 61 ELSRLYQESQTRRDSLTGTEQIFHSGFKEFARLHRVNSHVPEAVVEGASRAMRISMNREL 120
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILL 184
E + + FLG++ S +G+ G V G+M F ++ + + PGI E+LI+ +
Sbjct: 121 ETLETHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMVAPGIAEALIATAI 180
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
GL +IP+ +AYN+ + K + F EF AIL RQ
Sbjct: 181 GLFAAIPAVMAYNRLNQRVGKLEQNYDNFTEEFIAILHRQ 220
>gi|145634619|ref|ZP_01790328.1| long-chain-fatty-acid--CoA ligase [Haemophilus influenzae PittAA]
gi|145640340|ref|ZP_01795924.1| TolQ [Haemophilus influenzae R3021]
gi|145268164|gb|EDK08159.1| long-chain-fatty-acid--CoA ligase [Haemophilus influenzae PittAA]
gi|145274926|gb|EDK14788.1| TolQ [Haemophilus influenzae 22.4-21]
Length = 228
Score = 119 bits (298), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 116/221 (52%), Gaps = 3/221 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
+++ LF++ + V+ +I +L FSI+SW++IIQ+S ++ R FE FWSG+ L
Sbjct: 4 ELNFLDLFLKASIVVQLVIVILISFSIISWAIIIQRSRILTNALKEARTFEDRFWSGEDL 63
Query: 70 ETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + L N + G IF E+ + +P I R M++A+ RE+E
Sbjct: 64 NKLYEGLSNRRDGLTGSEQIFCVGFKEFSRLKQVNPDAPEAIIKGTTRAMNLAMNREIES 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ ++ FL +++S +G+ G V G+M F +++G + + PGI E+LI+ +GL
Sbjct: 124 LENRVPFLATVASVSPYIGLFGTVWGIMHAFMALSGAKQATLQMVAPGIAEALIATAIGL 183
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEG 227
+IP+ +AYN+ F +EF+ IL RQ G
Sbjct: 184 FAAIPAVMAYNRLSLRVNAIEQDYVNFIDEFTTILHRQAFG 224
>gi|33594235|ref|NP_881879.1| putative TolQ-like translocation protein [Bordetella pertussis
Tohama I]
gi|33603209|ref|NP_890769.1| putative TolQ-like translocation protein [Bordetella bronchiseptica
RB50]
gi|33564310|emb|CAE43611.1| putative TolQ-like translocation protein [Bordetella pertussis
Tohama I]
gi|33568840|emb|CAE34598.1| putative TolQ-like translocation protein [Bordetella bronchiseptica
RB50]
gi|332383649|gb|AEE68496.1| putative TolQ-like translocation protein [Bordetella pertussis CS]
Length = 226
Score = 119 bits (298), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 116/221 (52%), Gaps = 4/221 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S+ +L + V+ I+ LL SI+SW+ I K + +Q R FE FWSG L
Sbjct: 6 DMSLLSLISHASVPVQLIMLLLLGISIMSWTYIFAKRLAIKRAHQQTRRFEDDFWSGGDL 65
Query: 70 ETVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPI-GIQDRIDRMMDVAIARELE 126
+ +++ + LA IF + M+E+ K+ A + + D R M A RE++
Sbjct: 66 AMLQQAVATRRDEQGALARIFDAGMTEFLKARRTSAAGDVNAVLDGPRRAMRAAYQREMD 125
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLG 185
+ L+FL S S +G+LG V G+M F ++ + ++ PGI E+LI+ +G
Sbjct: 126 SLESHLNFLASAGSVSPYIGLLGTVWGIMHAFIGLSNMQQATLAAVAPGIAEALIATAIG 185
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
L +IP+ +AYN+F D + +++ + F +EF IL RQ
Sbjct: 186 LFAAIPAVVAYNRFTNDIDRLSIRFDSFVDEFLNILQRQVR 226
>gi|15604178|ref|NP_220693.1| TOLQ protein (tolQ) [Rickettsia prowazekii str. Madrid E]
gi|3860870|emb|CAA14770.1| TOLQ PROTEIN (tolQ) [Rickettsia prowazekii]
gi|292571910|gb|ADE29825.1| TolQ [Rickettsia prowazekii Rp22]
Length = 241
Score = 119 bits (298), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 75/220 (34%), Positives = 125/220 (56%), Gaps = 3/220 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
++SI +L + K ++ +L SI SWS+I+ K ++R+ + FE +FWSG L
Sbjct: 18 NLSILSLISSADIIGKSVMLMLLFASIWSWSIILHKIFRLAQVQRRIQSFENVFWSGCVL 77
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPI--GIQDRIDRMMDVAIARELEE 127
E + +S+K N LA IF+SAM+E KG + ++RI M +A RE+E+
Sbjct: 78 EQLYESIKKSVNNPLALIFVSAMNECNSLNTKGFSEALKNNHKERIMSAMYLAQNREIEK 137
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
+ + L+ L ++ S+ +G+ G V G+M FQSIA + ++ V PGI E+L++ +GL
Sbjct: 138 LEQNLNVLATIGSSAPFIGLFGTVWGIMHSFQSIASSKNTSLAVVAPGIAEALLATAIGL 197
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
V+IP+ I YN I ++E F +E ++ILS+ +
Sbjct: 198 FVAIPAVIFYNYLISRITLINNKIEDFISELNSILSKAID 237
>gi|238793894|ref|ZP_04637514.1| hypothetical protein yinte0001_25090 [Yersinia intermedia ATCC
29909]
gi|238726797|gb|EEQ18331.1| hypothetical protein yinte0001_25090 [Yersinia intermedia ATCC
29909]
Length = 228
Score = 119 bits (298), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 72/219 (32%), Positives = 111/219 (50%), Gaps = 3/219 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D++I LF+Q L VK I+ +L FSI SW++IIQ++ R FE FWSG L
Sbjct: 3 DMNILDLFLQASLFVKLIMLVLMGFSIASWAIIIQRTRILNAATRDAEAFEDKFWSGIEL 62
Query: 70 ETVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + + G IF S E+ + + +P + D R M +++ RELE
Sbjct: 63 SRLYQESQARRETLGGSEQIFHSGFKEFARLHRANSHAPEAVIDGASRAMRISMNRELEA 122
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ + FLG++ S +G+ G V G+M F S+ + + PGI E+LI+ +GL
Sbjct: 123 LETHIPFLGTVGSISPYIGLFGTVWGIMHAFISLGAVKQATLQMVAPGIAEALIATAIGL 182
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ +AYN+ + K + F EF AIL RQ
Sbjct: 183 FAAIPAVMAYNRLNQRVNKLEQNYDNFMEEFIAILHRQA 221
>gi|262277493|ref|ZP_06055286.1| protein TolQ [alpha proteobacterium HIMB114]
gi|262224596|gb|EEY75055.1| protein TolQ [alpha proteobacterium HIMB114]
Length = 225
Score = 119 bits (298), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 122/213 (57%), Gaps = 4/213 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D S + LF + VK +I +L SI SW++I +K F + + EFE+ F + +S+
Sbjct: 16 DFSFWTLFTRADFIVKSVIIMLIAASIYSWALIFEKYKIFKKIFKSSDEFEEEFLNSKSV 75
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+T+ + + + + +F S + ++ ++S + +++ R+MDVAI +E+E+
Sbjct: 76 KTLFEKTSSDTDDPMTVVFRSGANYLMQN---KSQSQTVLTEKVKRVMDVAIDKEVEKYE 132
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCV 188
KL+FL ++ S +G+ G V G+M FQSIA + ++ + PGI E+L + LGL
Sbjct: 133 NKLTFLATVGSVAPFIGLFGTVWGIMNSFQSIAISRNTSLAIVAPGIAEALFATALGLLA 192
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+IP+ +AYNKF S+KF ++E F F +I+
Sbjct: 193 AIPAVVAYNKFTSSSRKFTQKLENFTQTFLSII 225
>gi|300310552|ref|YP_003774644.1| MotA/TolQ/ExbB proton channel family protein [Herbaspirillum
seropedicae SmR1]
gi|300073337|gb|ADJ62736.1| MotA/TolQ/ExbB proton channel family protein [Herbaspirillum
seropedicae SmR1]
Length = 234
Score = 119 bits (298), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 107/204 (52%), Gaps = 12/204 (5%)
Query: 35 SILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCK-SLKNHHNIG-----LAAIF 88
SI+SW+ I +K R Q EFE++FWSG +L + + +L N G L IF
Sbjct: 31 SIISWTYIFRKMFTIRAARVQTEEFERVFWSGGNLSALYQDALSNRRKAGGAGGALERIF 90
Query: 89 MSAMSEWKKS-----CDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
+ M E+ K+ GA P + D R M A RE++ + L+FL S+ S
Sbjct: 91 QAGMGEFTKAKASVAARGGAVDPSLLLDGARRAMRAAYQREMDALESHLAFLASVGSVSP 150
Query: 144 LVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCVSIPSSIAYNKFIED 202
VG+ G V G+M F+ +A + ++ PGI E+LI+ +GL +IP+ +AYN++ D
Sbjct: 151 YVGLFGTVWGIMNAFRGLANVQQATLAAVAPGIAEALIATAIGLFAAIPAVVAYNRYSHD 210
Query: 203 SKKFAMQMEGFANEFSAILSRQTE 226
+ A++ E F EFS IL RQ
Sbjct: 211 IDRLAIRFESFIEEFSNILQRQAR 234
>gi|83950091|ref|ZP_00958824.1| proton transporter TolQ [Roseovarius nubinhibens ISM]
gi|83837990|gb|EAP77286.1| proton transporter TolQ [Roseovarius nubinhibens ISM]
Length = 201
Score = 119 bits (298), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 73/198 (36%), Positives = 108/198 (54%), Gaps = 1/198 (0%)
Query: 30 LLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFM 89
+L I S +WS+IIQK + + R + F+Q FWSG+ L+ + + + +F
Sbjct: 3 MLIIASFWAWSIIIQKLIMYRKARAEAERFDQRFWSGEPLDELFDEIGTEASGQSERVFA 62
Query: 90 SAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILG 149
+ M+EW++S RIDR MDVAI +E E++ LS L ++ S VG+ G
Sbjct: 63 AGMTEWRRSHRNDGGMIANATARIDRSMDVAIVKESEDLQSGLSVLATVGSTAPFVGLFG 122
Query: 150 AVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAM 208
V G+M F IA + N+ V PGI E+L++ LGL +IP+ I YNK D +
Sbjct: 123 TVWGIMHAFIGIAEEQNTNLAVVAPGIAEALLATGLGLLAAIPAVIFYNKLSADVDRIVA 182
Query: 209 QMEGFANEFSAILSRQTE 226
E FA+EF+ ILSRQ +
Sbjct: 183 GYEAFADEFATILSRQLD 200
>gi|253687640|ref|YP_003016830.1| protein TolQ [Pectobacterium carotovorum subsp. carotovorum PC1]
gi|251754218|gb|ACT12294.1| protein TolQ [Pectobacterium carotovorum subsp. carotovorum PC1]
Length = 228
Score = 119 bits (298), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 115/220 (52%), Gaps = 3/220 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
+ D+++F LF++ L VK I+ +L FSI SW++IIQ++ R+ FE FWSG
Sbjct: 1 MTDMNVFDLFLKASLLVKLIMLILICFSIASWAIIIQRTRILNAATREAEAFEDKFWSGI 60
Query: 68 SLETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
L + + ++ + G IF S E+ + + +P + + R M +++ REL
Sbjct: 61 ELSRLYQESQSRRDSLTGTEQIFHSGFKEFARLHRANSHAPEAVVEGASRAMRISMNREL 120
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILL 184
E + + FLG++ S +G+ G V G+M F ++ + + PGI E+LI+ +
Sbjct: 121 ETLETHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMVAPGIAEALIATAI 180
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
GL +IP+ +AYN+ K + F EF AIL RQ
Sbjct: 181 GLFAAIPAVMAYNRLSLRVGKLEQNYDNFTEEFIAILHRQ 220
>gi|33598299|ref|NP_885942.1| putative TolQ-like translocation protein [Bordetella parapertussis
12822]
gi|33566857|emb|CAE39072.1| putative TolQ-like translocation protein [Bordetella parapertussis]
Length = 226
Score = 119 bits (297), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 116/221 (52%), Gaps = 4/221 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S+ +L + V+ I+ LL SI+SW+ I K + +Q R FE FWSG L
Sbjct: 6 DMSLLSLVSHASVPVQLIMLLLLGISIMSWTYIFAKRLAIKRAHQQTRRFEDDFWSGGDL 65
Query: 70 ETVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPI-GIQDRIDRMMDVAIARELE 126
+ +++ + LA IF + M+E+ K+ A + + D R M A RE++
Sbjct: 66 AMLQQAVATRRDEQGALARIFDAGMTEFLKARRTSAAGDVNAVLDGPRRAMRAAYQREMD 125
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLG 185
+ L+FL S S +G+LG V G+M F ++ + ++ PGI E+LI+ +G
Sbjct: 126 SLESHLNFLASAGSVSPYIGLLGTVWGIMHAFIGLSNMQQATLAAVAPGIAEALIATAIG 185
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
L +IP+ +AYN+F D + +++ + F +EF IL RQ
Sbjct: 186 LFAAIPAVVAYNRFTNDIDRLSIRFDSFVDEFLNILQRQVR 226
>gi|33152787|ref|NP_874140.1| colicin transport protein, TolQ [Haemophilus ducreyi 35000HP]
gi|33149011|gb|AAP96529.1| colicin transport protein, TolQ [Haemophilus ducreyi 35000HP]
Length = 226
Score = 119 bits (297), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 111/217 (51%), Gaps = 3/217 (1%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLET 71
++ +LFMQ + VK +I +L FSILSW++IIQ+S ++ FE FWSG L
Sbjct: 6 NLVSLFMQASIVVKIVILILICFSILSWAIIIQRSQVLAKAKKAVVAFENKFWSGDDLHR 65
Query: 72 VCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+ + L+N G IF + E+ + +P R M +A+ RE+E +
Sbjct: 66 LHERLENRREGLSGSEQIFYAGFKEFLRLQQVNPEAPEATMKGTSRAMHLALNREVESLE 125
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCV 188
+ FLG++ S +G+ G V G+M F ++G + S+ PGI E+LI+ +GL
Sbjct: 126 SYIPFLGTVGSISPYIGLFGTVWGIMHSFMGLSGVKQATLQSVAPGIAEALIATAIGLFA 185
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ +AYN+ + F +EF IL RQ
Sbjct: 186 AIPAVMAYNRLNLAMNRLEQDYLNFIDEFITILHRQA 222
>gi|325579036|ref|ZP_08148992.1| TolQ colicin import protein [Haemophilus parainfluenzae ATCC 33392]
gi|325159271|gb|EGC71405.1| TolQ colicin import protein [Haemophilus parainfluenzae ATCC 33392]
Length = 228
Score = 119 bits (297), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 116/221 (52%), Gaps = 3/221 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
+++ LF++ + V+ +I +L FSI+SW++IIQ+S + ++ FE FWSG+ L
Sbjct: 4 ELNFLDLFLKASIVVQLVIVILISFSIISWAIIIQRSRILTSALKEANTFEDRFWSGEDL 63
Query: 70 ETVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ L N + G IF E+ + A +P I R M++A+ RE+E
Sbjct: 64 NKLYDGLSNRREVLTGSEQIFFVGFKEFSRLKQVNADAPEAIIKGTTRAMNLAMNREVEA 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ ++ FL +++S +G+ G V G+M F +++G + + PGI E+LI+ +GL
Sbjct: 124 LESRVPFLATVASVSPYIGLFGTVWGIMHAFMALSGAKQATLQMVAPGIAEALIATAIGL 183
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEG 227
+IP+ +AYN+ F +EF+ IL RQ G
Sbjct: 184 FAAIPAVMAYNRLSLRVNAIEQNYGNFIDEFTTILHRQAFG 224
>gi|37525404|ref|NP_928748.1| colicin uptake protein TolQ [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|36784832|emb|CAE13745.1| TolQ protein [Photorhabdus luminescens subsp. laumondii TTO1]
Length = 231
Score = 119 bits (297), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 114/221 (51%), Gaps = 3/221 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
+ D++I LF++ GL V+ I+ +L FS+ SW++IIQ++ R+ FE FWSG
Sbjct: 1 MTDMNILDLFLKAGLLVQLIMLILICFSVASWAIIIQRTKILNAATRESEAFEDKFWSGI 60
Query: 68 SLETVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
L + K ++ + G IF S E+ + +P + R M +++ REL
Sbjct: 61 ELSRLYKESQSRRDSLGGTEQIFYSGFKEFARLHHANNHAPEAVITGASRAMRISMNREL 120
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILL 184
E + + FLG++ S +G+ G V G+M F ++ + + PGI E+LI+ +
Sbjct: 121 ESLESHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMVAPGIAEALIATAI 180
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
GL +IP+ +AYN+ + K + F EF AIL RQ
Sbjct: 181 GLFAAIPAVMAYNRLNQRVNKLEQNYDNFMEEFLAILHRQA 221
>gi|315634716|ref|ZP_07890000.1| TolQ colicin import protein [Aggregatibacter segnis ATCC 33393]
gi|315476664|gb|EFU67412.1| TolQ colicin import protein [Aggregatibacter segnis ATCC 33393]
Length = 229
Score = 119 bits (297), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 117/221 (52%), Gaps = 3/221 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
+++ LF++ + V+ +I +L FSI+SW++IIQ+S ++ FE FWSG+ L
Sbjct: 4 ELNFLDLFLKASIVVQLVILILVSFSIISWAIIIQRSRVLTKALKESMAFEDRFWSGEDL 63
Query: 70 ETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + L N + G IF E+ + +P I R M++++ RE+E+
Sbjct: 64 NKLYEGLSNRRDGLTGSEQIFYVGFKEFTRLKQANPDAPEAIIKGSTRAMNLSMNREIED 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
I ++ FL +++S +G+ G V G+M F S++G + + PGI E+LI+ +GL
Sbjct: 124 IETRVPFLATVASISPYIGLFGTVWGIMHAFMSLSGAKQATLQMVAPGIAEALIATAIGL 183
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEG 227
+IP+ +AYN+ K F +EF+ IL RQ G
Sbjct: 184 FAAIPAVMAYNRLSLRVNKLEQNYGNFIDEFTTILHRQVFG 224
>gi|260597136|ref|YP_003209707.1| colicin uptake protein TolQ [Cronobacter turicensis z3032]
gi|260216313|emb|CBA29295.1| Protein tolQ [Cronobacter turicensis z3032]
Length = 231
Score = 119 bits (297), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 117/220 (53%), Gaps = 3/220 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
+ D++I LF++ L VK I+ +L FSI SW++IIQ++ R+ FE FWSG
Sbjct: 1 MTDMNILDLFLKASLLVKLIMLILIGFSIASWAIIIQRTRILNAASREAEAFEDKFWSGI 60
Query: 68 SLETVCK-SLKNHHNI-GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
L + + S N+ G IF + E+ + + +P I + R M +++ REL
Sbjct: 61 ELSRLYQESQGRRENLSGSEQIFYAGFKEFARLHRANSHAPEAIVEGASRAMRISMNREL 120
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILL 184
E + + FLG++ S +G+ G V G+M F ++ + + PGI E+LI+ +
Sbjct: 121 ETLETHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMVAPGIAEALIATAI 180
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
GL +IP+ +AYN+ + K + + F EF+AIL RQ
Sbjct: 181 GLFAAIPAVMAYNRLNQRVNKLELNYDNFMEEFTAILHRQ 220
>gi|330811390|ref|YP_004355852.1| Proton channel family protein [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327379498|gb|AEA70848.1| Proton channel family protein [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
Length = 231
Score = 119 bits (297), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 117/216 (54%), Gaps = 3/216 (1%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLET 71
S+++L + V+ ++ +L S+ SW +I Q+S RR FE+ FWSG L
Sbjct: 10 SMWSLVSNASVVVQLVMLILVAASVTSWIMIFQRSNMLRAGRRALESFEERFWSGIDLSK 69
Query: 72 VCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+ + ++ + G+ IF + E+ + + P + + + R M VAI+RE E++
Sbjct: 70 LYRQAGSNPDPDSGVEQIFRAGFKEFSRLRQQPGVDPEAVMEGVARAMRVAISREEEKLE 129
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCV 188
+ LSFL ++ S +G+ G V G+M F+ +A + ++ PGI E+L++ +GL
Sbjct: 130 QGLSFLATVGSVSPYIGLFGTVWGIMNSFRGLASAQQATLATVAPGIAEALVATAIGLFA 189
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+IP+ IAYN+F S+ + FA+EF AIL R+
Sbjct: 190 AIPAVIAYNRFAARSEALTSRYYTFADEFQAILHRK 225
>gi|149915617|ref|ZP_01904143.1| MotA/TolQ/ExbB proton channel [Roseobacter sp. AzwK-3b]
gi|149810509|gb|EDM70352.1| MotA/TolQ/ExbB proton channel [Roseobacter sp. AzwK-3b]
Length = 231
Score = 119 bits (297), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 79/219 (36%), Positives = 121/219 (55%), Gaps = 1/219 (0%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
MD S++ L+ + + VK ++ +L I S +WS+IIQK + + R F++ FWSG+
Sbjct: 12 MDFSLWGLYARATIIVKLVMWMLVIASFWAWSIIIQKIILYRKARADAAAFDRRFWSGEP 71
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
L+ + + + IF + M EW++S G RIDR MDVAI++E EE+
Sbjct: 72 LDELFDEIGPEPSGRSERIFAAGMMEWRRSHRNDGGLIAGATARIDRSMDVAISKETEEL 131
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
L L ++ S +G+ G V G+M F IA + ++ V PGI E+L++ LGL
Sbjct: 132 QSSLQILATIGSTTPFIGLFGTVWGIMNAFIEIAEQQNTSLAVVAPGIAEALLATGLGLL 191
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ I YNK DS + E FA+EF+ ILSRQ +
Sbjct: 192 AAIPAVIFYNKLSSDSDRIVGSYEAFADEFATILSRQLD 230
>gi|331000271|ref|ZP_08323955.1| protein TolQ [Parasutterella excrementihominis YIT 11859]
gi|329572437|gb|EGG54090.1| protein TolQ [Parasutterella excrementihominis YIT 11859]
Length = 227
Score = 118 bits (296), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 75/225 (33%), Positives = 117/225 (52%), Gaps = 6/225 (2%)
Query: 7 AIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG 66
A D+SI L V+ ++ +L IFS++SW++I QK RR+ R F++ FW G
Sbjct: 3 ASADLSIITLVAHASAVVQIVLAILLIFSLVSWTIIFQKWFQMSRARREARNFDKRFWGG 62
Query: 67 QSLETVCKS-LKNHHNIGL-AAIFMSAMSEWKKS--CDKGARS-PIGIQDRIDRMMDVAI 121
L + +S + +IG IF S M+E+ +S + AR+ G+ D + R M
Sbjct: 63 ADLNKLYESATERRSSIGPQEGIFYSGMTEFLRSRASNLEARAGTFGVIDGVSRAMRARY 122
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLI 180
REL+ + LS L ++ S +G+ G V G+M F + S ++ V PGI E+L+
Sbjct: 123 QRELDILESGLSVLATIGSVSPYIGLFGTVWGIMDAFTGLGNLESASLAVVAPGIAEALV 182
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+ +GL +IP+ I YN+F + + Q E F EF IL RQ
Sbjct: 183 ATAIGLFAAIPAVIGYNRFAYSLDRLSSQYESFMQEFQNILGRQA 227
>gi|198282213|ref|YP_002218534.1| protein TolQ [Acidithiobacillus ferrooxidans ATCC 53993]
gi|218666774|ref|YP_002424578.1| TolQ protein [Acidithiobacillus ferrooxidans ATCC 23270]
gi|198246734|gb|ACH82327.1| protein TolQ [Acidithiobacillus ferrooxidans ATCC 53993]
gi|218518987|gb|ACK79573.1| TolQ protein [Acidithiobacillus ferrooxidans ATCC 23270]
Length = 233
Score = 118 bits (296), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 73/218 (33%), Positives = 116/218 (53%), Gaps = 7/218 (3%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+S+ L M V+ I+ +L I S++SW++I QK F +R FE+ FWSG +
Sbjct: 13 LSLGHLVMNASWVVQGILAILMIASVISWTIIFQKWAIFAAAQRALERFEKRFWSGGEMS 72
Query: 71 TVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ + + + N+ G +IF + E+++ +K P D R M VA RE+ +
Sbjct: 73 QIYQHVSGNANLETGAGSIFCAGYEEFQRQRNK--IRPSDALDAARRAMRVAQMREVGRL 130
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGL 186
L+FL S+SS +G+ G V G+M F +I AG + V+ P + E+LI+ GL
Sbjct: 131 ENNLAFLASVSSVSPFIGLFGTVWGIMTAFMNIGMAGQATLATVA-PPVAEALIATAAGL 189
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+IP++ AYN++I K Q E F +EF+ IL RQ
Sbjct: 190 FAAIPATAAYNRYIHQLDKLDAQYEVFMDEFTNILHRQ 227
>gi|187479382|ref|YP_787407.1| TolQ protein [Bordetella avium 197N]
gi|115423969|emb|CAJ50522.1| TolQ protein [Bordetella avium 197N]
Length = 224
Score = 118 bits (296), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 117/220 (53%), Gaps = 4/220 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S+ +L + V+ I+ LL S++SW+ I K + +Q R FE FWSG L
Sbjct: 6 DMSLSSLLFNASVPVQLIMLLLLGISVVSWTYIFAKRMAIKRANQQTRRFEDDFWSGGDL 65
Query: 70 ETVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ +++ + + LA IF + M+E+ K+ G S + D R M A RE++
Sbjct: 66 AMLQQAVSSRRDEQGALARIFDAGMTEFLKARRSGGDSS-SLLDGPRRAMRAAYQREMDS 124
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ L+FL S S +G+LG V G+M F ++ + S+ PGI E+LI+ +GL
Sbjct: 125 LESHLNFLASAGSVSPYIGLLGTVWGIMHAFIGLSNMQQATLASVAPGIAEALIATAIGL 184
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ +AYN+F D + +++ + F +EF IL RQ
Sbjct: 185 FAAIPAVVAYNRFTNDIDRISIRFDSFVDEFLNILQRQVR 224
>gi|71735754|ref|YP_275910.1| tolQ protein [Pseudomonas syringae pv. phaseolicola 1448A]
gi|71556307|gb|AAZ35518.1| tolQ protein [Pseudomonas syringae pv. phaseolicola 1448A]
gi|320323049|gb|EFW79138.1| tolQ protein [Pseudomonas syringae pv. glycinea str. B076]
gi|320329679|gb|EFW85668.1| tolQ protein [Pseudomonas syringae pv. glycinea str. race 4]
gi|330877976|gb|EGH12125.1| tolQ protein [Pseudomonas syringae pv. glycinea str. race 4]
Length = 231
Score = 118 bits (296), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 116/216 (53%), Gaps = 3/216 (1%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLET 71
S+++L + V+ ++ +L S+ SW VI Q+S RR FE+ FWSG L
Sbjct: 10 SMWSLVSNASIVVQLVMLILVAASVTSWIVIFQRSNMLRAGRRALDSFEERFWSGIDLSK 69
Query: 72 VCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+ + ++ + G+ IF + E+ + + P + + + R M VAI+RE E++
Sbjct: 70 LYRQAGSNPDPDSGVEQIFRAGFKEFSRLRQQSGVDPDAVMEGVARAMRVAISREEEKLE 129
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCV 188
L +L ++ S VG+ G V G+M F+ +A + ++ PGI E+LI+ +GL
Sbjct: 130 AGLPYLATVGSTSPYVGLFGTVWGIMNSFRGLATAQQATLATVAPGIAEALIATAIGLFA 189
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+IP+ IAYN+F+ S+ + FA+EF AIL R+
Sbjct: 190 AIPAVIAYNRFVARSETLISRYYTFADEFQAILHRK 225
>gi|163802044|ref|ZP_02195940.1| TolQ protein [Vibrio sp. AND4]
gi|159174185|gb|EDP58993.1| TolQ protein [Vibrio sp. AND4]
Length = 232
Score = 118 bits (296), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 73/219 (33%), Positives = 113/219 (51%), Gaps = 5/219 (2%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
DISI LF+Q L VK ++ L SI SW++II++S + FE FWSG L
Sbjct: 4 DISILDLFLQASLLVKLVMLTLLGMSIASWAMIIKRSKVLSQESKSAESFEDKFWSGTDL 63
Query: 70 ETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + +K + G IF + +E+ + A SP + + R M VA+ARE++E
Sbjct: 64 SLLYQKVKGRKDEITGTEEIFYAGFTEFARLRKSNANSPDYVMEGTGRAMRVAVAREVDE 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI--PGIIESLISILLG 185
+ L FL ++ S +G+ G V G+M F ++ G +S+ PGI E+LI+ +G
Sbjct: 124 LETSLPFLATVGSISPYIGLFGTVWGIMHAFIAL-GEVKQATLSMVAPGIAEALIATAMG 182
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
L +IP+ + YN+ K F+ EF +IL RQ
Sbjct: 183 LFAAIPAVMFYNRLSNKVSKLEHTYATFSEEFHSILHRQ 221
>gi|50120309|ref|YP_049476.1| colicin uptake protein TolQ [Pectobacterium atrosepticum SCRI1043]
gi|49610835|emb|CAG74280.1| TolQ protein [Pectobacterium atrosepticum SCRI1043]
Length = 228
Score = 118 bits (296), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 112/218 (51%), Gaps = 3/218 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+++F LF++ L VK I+ +L FSI SW++IIQ++ R FE FWSG L
Sbjct: 3 DMNVFDLFLKASLLVKLIMLILICFSIASWAIIIQRTRILNAATRDAEAFEDKFWSGIEL 62
Query: 70 ETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + + + G IF S E+ + + P + + R M +++ RELE
Sbjct: 63 SRLYQESQTRRDSLTGTEQIFHSGFKEFARLHRVNSHVPEAVVEGASRAMRISMNRELET 122
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ + FLG++ S +G+ G V G+M F ++ + + PGI E+LI+ +GL
Sbjct: 123 LETHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMVAPGIAEALIATAIGL 182
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+IP+ +AYN+ + K + F EF AIL RQ
Sbjct: 183 FAAIPAVMAYNRLSQRVGKLEQNYDNFTEEFIAILHRQ 220
>gi|187922767|ref|YP_001894409.1| protein TolQ [Burkholderia phytofirmans PsJN]
gi|187713961|gb|ACD15185.1| protein TolQ [Burkholderia phytofirmans PsJN]
Length = 225
Score = 118 bits (296), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 77/220 (35%), Positives = 118/220 (53%), Gaps = 3/220 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+SI +L + L + ++ LL + S+LSW+ I +K R Q FE+ FWSG L
Sbjct: 6 DLSIVSLVLNASLLAQAVMALLLLLSLLSWTFIFRKWFAIRRARAQTERFERDFWSGGDL 65
Query: 70 ETVCKSL-KNHHNIG-LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + +S N H IG L IF S M E+ K +K I D R M A RE++
Sbjct: 66 QALYQSAANNRHTIGALERIFESGMREFLKGKEKRLNDSGAILDGARRAMRAAFQREMDV 125
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ L+FL S+ S +G+ G V G+M F+ +A + ++ PGI E+L + +GL
Sbjct: 126 LEANLAFLASVGSVSPYIGLFGTVWGIMNAFRGLANVQQATLANVAPGIAEALTATAIGL 185
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ +AYN++ D + A++ E F EFS IL RQ +
Sbjct: 186 FAAIPAVVAYNRYAHDIDRLAIRFETFIEEFSNILQRQAQ 225
>gi|303258200|ref|ZP_07344207.1| protein TolQ [Burkholderiales bacterium 1_1_47]
gi|302858953|gb|EFL82037.1| protein TolQ [Burkholderiales bacterium 1_1_47]
Length = 228
Score = 118 bits (296), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 75/225 (33%), Positives = 117/225 (52%), Gaps = 6/225 (2%)
Query: 7 AIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG 66
A D+SI L V+ ++ +L IFS++SW++I QK RR+ R F++ FW G
Sbjct: 4 ASADLSIITLVAHASAVVQIVLAILLIFSLVSWTIIFQKWFQMSRARREARNFDKRFWGG 63
Query: 67 QSLETVCKS-LKNHHNIGL-AAIFMSAMSEWKKS--CDKGARS-PIGIQDRIDRMMDVAI 121
L + +S + +IG IF S M+E+ +S + AR+ G+ D + R M
Sbjct: 64 ADLNKLYESATERRSSIGPQEGIFYSGMTEFLRSRASNLEARAGTFGVIDGVSRAMRARY 123
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLI 180
REL+ + LS L ++ S +G+ G V G+M F + S ++ V PGI E+L+
Sbjct: 124 QRELDILESGLSVLATIGSVSPYIGLFGTVWGIMDAFTGLGNLESASLAVVAPGIAEALV 183
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+ +GL +IP+ I YN+F + + Q E F EF IL RQ
Sbjct: 184 ATAIGLFAAIPAVIGYNRFAYSLDRLSSQYESFMQEFQNILGRQA 228
>gi|13235473|emb|CAC33632.1| TolQ protein [Rickettsia montanensis]
Length = 241
Score = 118 bits (296), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 73/205 (35%), Positives = 117/205 (57%), Gaps = 3/205 (1%)
Query: 25 KCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGL 84
K ++ +L I SI SW++I+ K + +++ R FE +FWSG LE + +S+K N L
Sbjct: 33 KSVMLMLLIASIWSWAIILDKIFKLVQVQKSMRAFENVFWSGGVLERLYESIKRSVNNPL 92
Query: 85 AAIFMSAMSEWKKSCDKGARSPI--GIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAG 142
A IF+ AM E K KG + ++RI M +A RE+ ++ + LSFL ++ S+
Sbjct: 93 ALIFVLAMDECKSLSTKGLSEGLKNNHKERITGAMYLAQNREVAKLEKNLSFLATVGSSA 152
Query: 143 LLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIE 201
VG+ G V G+M FQSIA + ++ V PGI E+L++ +GL +IP+ I YN I
Sbjct: 153 PFVGLFGTVWGIMHSFQSIATSKNTSLAVVAPGIAEALLATAIGLFAAIPAVIFYNYLIS 212
Query: 202 DSKKFAMQMEGFANEFSAILSRQTE 226
++E F +E ++ILS+ +
Sbjct: 213 RITLINNKIEDFISELNSILSKAID 237
>gi|152969305|ref|YP_001334414.1| colicin uptake protein TolQ [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|262041203|ref|ZP_06014415.1| TolQ colicin import protein [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|329998747|ref|ZP_08303201.1| protein TolQ [Klebsiella sp. MS 92-3]
gi|150954154|gb|ABR76184.1| inner membrane protein [Klebsiella pneumoniae subsp. pneumoniae MGH
78578]
gi|259041432|gb|EEW42491.1| TolQ colicin import protein [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|328538574|gb|EGF64678.1| protein TolQ [Klebsiella sp. MS 92-3]
Length = 227
Score = 118 bits (295), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 115/217 (52%), Gaps = 3/217 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
++I LF++ L VK I+ +L FSI SW++IIQ++ + R+ FE FWSG L
Sbjct: 1 MNILDLFLKASLLVKLIMLILIGFSIASWAIIIQRTRILNSAAREAEAFEDKFWSGIELS 60
Query: 71 TVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ + + + G IF S E+ + + +P I + R M +++ RELE +
Sbjct: 61 RLYQESQGRRDNLTGSEQIFYSGFKEFARLHRANSHAPEAIVEGASRAMRISMNRELETL 120
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLC 187
+ FLG++ S +G+ G V G+M F ++ + + PGI E+LI+ +GL
Sbjct: 121 ETHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMVAPGIAEALIATAIGLF 180
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+IP+ +AYN+ + K + + F EF+AIL RQ
Sbjct: 181 AAIPAVMAYNRLNQRVNKLELNYDNFMEEFTAILHRQ 217
>gi|16272333|ref|NP_438546.1| colicin transport protein [Haemophilus influenzae Rd KW20]
gi|68248988|ref|YP_248100.1| hypothetical protein NTHI0505 [Haemophilus influenzae 86-028NP]
gi|145628745|ref|ZP_01784545.1| TolQ [Haemophilus influenzae 22.1-21]
gi|145636347|ref|ZP_01792016.1| long-chain-fatty-acid--CoA ligase [Haemophilus influenzae PittHH]
gi|148825333|ref|YP_001290086.1| long-chain-fatty-acid--CoA ligase [Haemophilus influenzae PittEE]
gi|229844452|ref|ZP_04464592.1| long-chain-fatty-acid--CoA ligase [Haemophilus influenzae 6P18H1]
gi|229846472|ref|ZP_04466580.1| long-chain-fatty-acid--CoA ligase [Haemophilus influenzae 7P49H1]
gi|260580552|ref|ZP_05848380.1| TolQ protein [Haemophilus influenzae RdAW]
gi|260582351|ref|ZP_05850144.1| TolQ protein [Haemophilus influenzae NT127]
gi|319775686|ref|YP_004138174.1| membrane spanning protein in TolA-TolQ-TolR complex [Haemophilus
influenzae F3047]
gi|319898093|ref|YP_004136290.1| membrane spanning protein in tola-tolq-tolr complex [Haemophilus
influenzae F3031]
gi|329122260|ref|ZP_08250848.1| TolQ colicin import protein [Haemophilus aegyptius ATCC 11116]
gi|1174730|sp|P43768|TOLQ_HAEIN RecName: Full=Protein tolQ
gi|1573355|gb|AAC22043.1| colicin transport protein (tolQ) [Haemophilus influenzae Rd KW20]
gi|68057187|gb|AAX87440.1| TolQ [Haemophilus influenzae 86-028NP]
gi|144979215|gb|EDJ88901.1| TolQ [Haemophilus influenzae 22.1-21]
gi|145270512|gb|EDK10446.1| long-chain-fatty-acid--CoA ligase [Haemophilus influenzae PittHH]
gi|148715493|gb|ABQ97703.1| long-chain-fatty-acid--CoA ligase [Haemophilus influenzae PittEE]
gi|229810565|gb|EEP46283.1| long-chain-fatty-acid--CoA ligase [Haemophilus influenzae 7P49H1]
gi|229812701|gb|EEP48390.1| long-chain-fatty-acid--CoA ligase [Haemophilus influenzae 6P18H1]
gi|260092894|gb|EEW76829.1| TolQ protein [Haemophilus influenzae RdAW]
gi|260094719|gb|EEW78614.1| TolQ protein [Haemophilus influenzae NT127]
gi|301169087|emb|CBW28684.1| membrane spanning protein in TolA-TolQ-TolR complex [Haemophilus
influenzae 10810]
gi|317433599|emb|CBY81983.1| membrane spanning protein in TolA-TolQ-TolR complex [Haemophilus
influenzae F3031]
gi|317450277|emb|CBY86493.1| membrane spanning protein in TolA-TolQ-TolR complex [Haemophilus
influenzae F3047]
gi|327473821|gb|EGF19238.1| TolQ colicin import protein [Haemophilus aegyptius ATCC 11116]
Length = 228
Score = 118 bits (295), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 116/221 (52%), Gaps = 3/221 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
+++ LF++ + V+ +I +L FSI+SW++IIQ+S ++ R FE FWSG+ L
Sbjct: 4 ELNFLDLFLKASIVVQLVIVILISFSIISWAIIIQRSRILTNALKEARTFEDRFWSGEDL 63
Query: 70 ETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + L N + G IF E+ + +P I R M++A+ RE+E
Sbjct: 64 NKLYEGLSNRRDGLTGSEQIFCVGFKEFSRLKQVNPDAPEAIIKGTMRAMNLAMNREIES 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ ++ FL +++S +G+ G V G+M F +++G + + PGI E+LI+ +GL
Sbjct: 124 LENRVPFLATVASVSPYIGLFGTVWGIMHAFMALSGAKQATLQMVAPGIAEALIATAIGL 183
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEG 227
+IP+ +AYN+ F +EF+ IL RQ G
Sbjct: 184 FAAIPAVMAYNRLSLRVNAIEQDYGNFIDEFTTILHRQAFG 224
>gi|330502222|ref|YP_004379091.1| MotA/TolQ/ExbB proton channel [Pseudomonas mendocina NK-01]
gi|328916508|gb|AEB57339.1| MotA/TolQ/ExbB proton channel [Pseudomonas mendocina NK-01]
Length = 231
Score = 118 bits (295), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 116/223 (52%), Gaps = 3/223 (1%)
Query: 7 AIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG 66
A+ +S+++L L V+ ++ L S++SW +I Q+S +R FE FWSG
Sbjct: 5 AVDHMSMWSLISNASLVVQLVMLTLVAASVISWVMIFQRSNALRAAKRALDNFEDRFWSG 64
Query: 67 QSLETVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARE 124
L + + ++ + GL IF + E+ + + P + D + R M VAI+RE
Sbjct: 65 IDLSKLYRQAGSNPDPDSGLEQIFRAGFKEFSRLRQQQGVDPDAVMDGVARAMRVAISRE 124
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISIL 183
E++ L FL ++ S +G+ G V G+M F+ +A + ++ PGI E+LI+
Sbjct: 125 EEKLETALPFLATVGSTSPYIGLFGTVWGIMNSFRGLAQVQQATLATVAPGIAEALIATA 184
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+GL +IP+ IAYN+F + + FA+EF AIL R+
Sbjct: 185 IGLFAAIPAVIAYNRFSARGEMLIGRYYTFADEFQAILHRKVH 227
>gi|251790485|ref|YP_003005206.1| colicin uptake protein TolQ [Dickeya zeae Ech1591]
gi|271499761|ref|YP_003332786.1| protein TolQ [Dickeya dadantii Ech586]
gi|247539106|gb|ACT07727.1| protein TolQ [Dickeya zeae Ech1591]
gi|270343316|gb|ACZ76081.1| protein TolQ [Dickeya dadantii Ech586]
Length = 228
Score = 118 bits (295), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 115/225 (51%), Gaps = 6/225 (2%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D++I LF++ L VK I+ +L FSI SW++IIQ++ R FE FWSG L
Sbjct: 3 DMNILDLFLKASLLVKLIMLILIGFSIASWAIIIQRTRILNAATRDAEAFEDKFWSGIEL 62
Query: 70 ETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + + G IF + E+ + + +P + + R M +++ RELE
Sbjct: 63 SRLYQESQTRRENLTGTEQIFYAGFKEFARLHRANSHAPEAVVEGASRAMRISLNRELET 122
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ + FLG++ S +G+ G V G+M F ++ + + PGI E+LI+ +GL
Sbjct: 123 LETHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMVAPGIAEALIATAIGL 182
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ---TEGN 228
+IP+ +AYN+ + K + F EF AIL RQ +EGN
Sbjct: 183 FAAIPAVMAYNRLNQRVNKLEQNYDNFMEEFIAILHRQAFSSEGN 227
>gi|241767252|ref|ZP_04764992.1| protein TolQ [Acidovorax delafieldii 2AN]
gi|241362086|gb|EER58205.1| protein TolQ [Acidovorax delafieldii 2AN]
Length = 233
Score = 118 bits (295), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 77/218 (35%), Positives = 116/218 (53%), Gaps = 3/218 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+SI +L + V+ ++ LL S+ SW+ I +K ++ EFE+ FWSG SL
Sbjct: 5 DMSILSLVLHASWVVQLVMLLLLGVSVASWAAIFRKLFALKRVKNLNEEFERDFWSGTSL 64
Query: 70 ETVCKSL-KNHHNIG-LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ S +N N G + IF S M E++K ++ P + D R M + RE++
Sbjct: 65 NDLYASAAQNAKNAGPMERIFASGMREYQKLRERRITDPGTLLDGARRAMRASFQREMDV 124
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ LSFLGS++S VG+ G V G+M F AG + ++ PGI E+L++ +GL
Sbjct: 125 VESSLSFLGSVASVSPYVGLFGTVWGIMHAFTGFAGMEQVTLATVAPGIAEALVATAIGL 184
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+IP+ IAYN+F D + A E F EFS IL R
Sbjct: 185 FAAIPAVIAYNRFARDIDRVATHQETFIEEFSNILQRN 222
>gi|145630444|ref|ZP_01786225.1| long-chain-fatty-acid--CoA ligase [Haemophilus influenzae R3021]
gi|144984179|gb|EDJ91616.1| long-chain-fatty-acid--CoA ligase [Haemophilus influenzae R3021]
Length = 228
Score = 118 bits (295), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 116/221 (52%), Gaps = 3/221 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
+++ LF++ + V+ +I +L FSI+SW++IIQ+S ++ R FE FWSG+ L
Sbjct: 4 ELNFLDLFLKASIVVQLVIVILISFSIISWAIIIQRSRILTNALKEARTFEDRFWSGEDL 63
Query: 70 ETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + L N + G IF E+ + +P I R M++A+ RE+E
Sbjct: 64 NKLYEGLSNRRDGLTGSEQIFCVGFKEFSRLKQVNPDAPEAIIKGTMRAMNLAMNREIES 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ ++ FL +++S +G+ G V G+M F +++G + + PGI E+LI+ +GL
Sbjct: 124 LENRVPFLATVASVSPYIGLFGTVWGIMHAFMALSGAKQATLQMVAPGIAEALIATAIGL 183
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEG 227
+IP+ +AYN+ F +EF+ IL RQ G
Sbjct: 184 FAAIPAVMAYNRLSLRVNAIEQDYVNFIDEFTTILHRQAFG 224
>gi|145638704|ref|ZP_01794313.1| long-chain-fatty-acid--CoA ligase [Haemophilus influenzae PittII]
gi|145272299|gb|EDK12207.1| long-chain-fatty-acid--CoA ligase [Haemophilus influenzae PittII]
gi|309750196|gb|ADO80180.1| Outer membrane integrity protein TolQ [Haemophilus influenzae
R2866]
Length = 228
Score = 118 bits (295), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 116/221 (52%), Gaps = 3/221 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
+++ LF++ + V+ +I +L FSI+SW++IIQ+S ++ R FE FWSG+ L
Sbjct: 4 ELNFLDLFLKASIVVQLVIVILISFSIISWAIIIQRSRILTNALKEARTFEDRFWSGEDL 63
Query: 70 ETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + L N + G IF E+ + +P I R M++A+ RE+E
Sbjct: 64 NKLYEGLSNRRDGLTGSEQIFSVGFKEFSRLKQVNPDAPEAIIKGTMRAMNLAMNREIES 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ ++ FL +++S +G+ G V G+M F +++G + + PGI E+LI+ +GL
Sbjct: 124 LENRVPFLATVASVSPYIGLFGTVWGIMHAFMALSGAKQATLQMVAPGIAEALIATAIGL 183
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEG 227
+IP+ +AYN+ F +EF+ IL RQ G
Sbjct: 184 FAAIPAVMAYNRLSLRVNAIEQDYGNFIDEFTTILHRQAFG 224
>gi|292490338|ref|YP_003525777.1| protein TolQ [Nitrosococcus halophilus Nc4]
gi|291578933|gb|ADE13390.1| protein TolQ [Nitrosococcus halophilus Nc4]
Length = 225
Score = 118 bits (295), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 115/222 (51%), Gaps = 9/222 (4%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
+D+S+F L V+ ++ +L + S+++W++I +K + EFE FWSG+
Sbjct: 3 VDLSLFELVTGASFLVQLVMLILLVISVIAWTLIFRKRSELKGAKEAADEFEDRFWSGKE 62
Query: 69 L-----ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAR 123
L E + + H G+ IF S E+ + + + D R M V++AR
Sbjct: 63 LNSLYAELAAREIPLH---GMEGIFFSGFREFVRLRKQTNAEHRAVLDGTQRAMRVSLAR 119
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISI 182
E++ + L FL + S +G+ G V G+M F+++ + + + PGI E+LI+
Sbjct: 120 EIDTLEAALPFLATAGSTSPYIGLFGTVWGIMNSFRALGNAHQATLAMVAPGIAEALIAT 179
Query: 183 LLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+GL +IP+ IAYN++I + ++ + + F EFS IL RQ
Sbjct: 180 AMGLFAAIPAVIAYNRYIHEVERLINRYDTFLEEFSTILQRQ 221
>gi|257095748|ref|YP_003169389.1| protein TolQ [Candidatus Accumulibacter phosphatis clade IIA str.
UW-1]
gi|257048272|gb|ACV37460.1| protein TolQ [Candidatus Accumulibacter phosphatis clade IIA str.
UW-1]
Length = 225
Score = 118 bits (295), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 113/218 (51%), Gaps = 3/218 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+SI L + V+ ++ LL S +SW I +K R Q +FE+ FWSG L
Sbjct: 6 DLSILHLILNASAVVQAVMLLLAGVSFMSWYYIFRKWFTVKAARAQTEQFERDFWSGGDL 65
Query: 70 ETVCKS-LKNHHNIG-LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
++ +S + + H+ G + IF + E+ K + P + D R M RE++
Sbjct: 66 NSLYQSAINDRHSTGNMERIFEAGFREFTKLRSQKNLDPKDVIDGSRRAMRATYQREMDS 125
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
I L+FL S+ S VG+ G V G+M F+ ++ + ++ PGI E+L++ +GL
Sbjct: 126 IDSHLAFLASVGSVSPYVGLFGTVWGIMHSFRGLSNVGQATLAAVAPGIAEALVATAIGL 185
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+IP+ +AYN+F + + + + E F EFS IL RQ
Sbjct: 186 FAAIPAVVAYNRFAHEIDRLSSRFESFMEEFSNILQRQ 223
>gi|227327553|ref|ZP_03831577.1| colicin uptake protein TolQ [Pectobacterium carotovorum subsp.
carotovorum WPP14]
Length = 225
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 113/217 (52%), Gaps = 3/217 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+++F LF++ L VK I+ +L FSI SW++IIQ++ R+ FE FWSG L
Sbjct: 1 MNVFDLFLKASLLVKLIMLILICFSIASWAIIIQRTRILNAATREAEAFEDKFWSGIELS 60
Query: 71 TVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ + + + G IF S E+ + + +P + + R M +++ RELE +
Sbjct: 61 RLYQESQTRRDSLTGTEQIFHSGFKEFARLHRVNSHAPEAVVEGASRAMRISMNRELETL 120
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLC 187
+ FLG++ S +G+ G V G+M F ++ + + PGI E+LI+ +GL
Sbjct: 121 ETHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMVAPGIAEALIATAIGLF 180
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+IP+ +AYN+ + K + F EF AIL RQ
Sbjct: 181 AAIPAVMAYNRLNQRVGKLEQNYDNFTEEFIAILHRQ 217
>gi|121611697|ref|YP_999504.1| MotA/TolQ/ExbB proton channel [Verminephrobacter eiseniae EF01-2]
gi|121556337|gb|ABM60486.1| MotA/TolQ/ExbB proton channel [Verminephrobacter eiseniae EF01-2]
Length = 235
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/224 (33%), Positives = 116/224 (51%), Gaps = 3/224 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+SI +L + V+ ++ LL SI SW+ I++K ++ EFE+ FWSG SL
Sbjct: 5 DMSIISLMLHASWMVQLVLLLLLSVSIASWAAILRKLFALARIKALNEEFEREFWSGASL 64
Query: 70 ETV-CKSLKNHHNIG-LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + +N G + IF S M E +K ++ P + D R M + RE++
Sbjct: 65 NDLYANATRNARQAGPMERIFASGMREHQKLRERRIADPGTLLDGARRAMRASFQREMDV 124
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ LSFL S+ S VG+ G V G+M F AG + ++ PGI E+L++ +GL
Sbjct: 125 VESSLSFLASVGSVSPYVGLFGTVWGIMHAFTGFAGMAQVTLATVAPGIAEALVATAIGL 184
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
+IP+ IAYN+F D + A E F EFS IL R +++
Sbjct: 185 FAAIPAVIAYNRFARDIDRVATHQETFIEEFSNILQRNLGAHVA 228
>gi|170025181|ref|YP_001721686.1| colicin uptake protein TolQ [Yersinia pseudotuberculosis YPIII]
gi|186894553|ref|YP_001871665.1| colicin uptake protein TolQ [Yersinia pseudotuberculosis PB1/+]
gi|169751715|gb|ACA69233.1| protein TolQ [Yersinia pseudotuberculosis YPIII]
gi|186697579|gb|ACC88208.1| protein TolQ [Yersinia pseudotuberculosis PB1/+]
Length = 225
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/218 (32%), Positives = 111/218 (50%), Gaps = 3/218 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
++I LF+Q L VK I+ +L FSI SW++IIQ++ R FE FWSG L
Sbjct: 1 MNILDLFLQASLFVKLIMLVLMGFSIASWAIIIQRTRILNAATRDAEAFEDKFWSGIELS 60
Query: 71 TVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ + + + G IF S E+ + + +P + D R M +++ RELE +
Sbjct: 61 RLYQESQARRDTLSGSEQIFHSGFKEFARLHRANSHAPEAVIDGASRAMRISMNRELEAL 120
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLC 187
+ FLG++ S +G+ G V G+M F S+ + + PGI E+LI+ +GL
Sbjct: 121 ETHIPFLGTVGSISPYIGLFGTVWGIMHAFISLGAVKQATLQMVAPGIAEALIATAIGLF 180
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ +AYN+ + K + F EF AIL RQ
Sbjct: 181 AAIPAVMAYNRLNQHVNKLEQNYDNFMEEFIAILHRQA 218
>gi|317402477|gb|EFV83045.1| TolQ colicin import protein [Achromobacter xylosoxidans C54]
Length = 226
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/224 (31%), Positives = 116/224 (51%), Gaps = 4/224 (1%)
Query: 7 AIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG 66
A D+S+ +L + V+ I+ +L SI+SW+ I K + Q R FE FWSG
Sbjct: 3 ATNDMSLLSLISHASVPVQLIMLMLLGISIMSWTYIFAKRLAIKRAHAQTRRFEDDFWSG 62
Query: 67 QSLETVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGA-RSPIGIQDRIDRMMDVAIAR 123
L + +++ + + LA IF + M+E+ K+ A + D R M A R
Sbjct: 63 GDLSMLQQAVASRRDEQGALARIFDAGMTEFLKARRGNASNDATAVLDGPRRAMRAAYQR 122
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISI 182
E++ + L+FL S S +G+LG V G+M F ++ + S+ PGI E+LI+
Sbjct: 123 EMDALESHLNFLASAGSVSPYIGLLGTVWGIMHAFIGLSNMQQATLASVAPGIAEALIAT 182
Query: 183 LLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+GL +IP+ +AYN+F D + +++ + F +EF IL RQ
Sbjct: 183 AIGLFAAIPAVVAYNRFTNDIDRISIRFDSFVDEFLNILQRQVR 226
>gi|311103964|ref|YP_003976817.1| protein TolQ [Achromobacter xylosoxidans A8]
gi|310758653|gb|ADP14102.1| protein TolQ [Achromobacter xylosoxidans A8]
Length = 226
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 114/221 (51%), Gaps = 4/221 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S+ +L + V+ I+ +L SI+SW+ I K + Q R FE FWSG L
Sbjct: 6 DMSLLSLISHASVPVQLIMLMLLGISIMSWTYIFAKRLAIKRAHAQTRRFEDDFWSGGDL 65
Query: 70 ETVCKSLKNHHNI--GLAAIFMSAMSEW-KKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
+ +++ + + LA IF + M+E+ K A + D R M A RE++
Sbjct: 66 SMLQQAVASRRDEQGALARIFDAGMTEFLKARRGNAAGDATAVLDGPRRAMRAAYQREMD 125
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLG 185
+ L+FL S S +G+LG V G+M F ++ + S+ PGI E+LI+ +G
Sbjct: 126 SLESHLNFLASAGSVSPYIGLLGTVWGIMHAFIGLSNMQQATLASVAPGIAEALIATAIG 185
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
L +IP+ +AYN+F D + +++ + F +EF IL RQ
Sbjct: 186 LFAAIPAVVAYNRFTNDIDRISIRFDSFVDEFLNILQRQVR 226
>gi|239995976|ref|ZP_04716500.1| tolQ protein [Alteromonas macleodii ATCC 27126]
Length = 229
Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/216 (34%), Positives = 114/216 (52%), Gaps = 3/216 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D++ LF+Q V+ ++ LL SI SW+ I Q+S R + R+FE FWSG L
Sbjct: 4 DLTFIGLFLQASFIVQLVMLLLLSVSIASWTFIFQRSKALSAARNEMRQFEDKFWSGADL 63
Query: 70 ETVCKSLKNHHNI-GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ + L N+ G+ +IF S E+ + K + GI D R M V+++R++EE+
Sbjct: 64 NRLYQELSARTNLTGMGSIFCSGFKEFVR-LRKSNTATNGIVDGTYRAMRVSMSRQVEEL 122
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLC 187
+L FL + S +G+ G V G+M F ++ + + PGI E+LI+ +GL
Sbjct: 123 ESRLPFLATAGSISPYIGLFGTVWGIMNAFIALGEVQQATLAMVAPGIAEALIATAIGLF 182
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
+IP+ IAYN+F +K F EFSAIL R
Sbjct: 183 AAIPAVIAYNRFSHQVEKLENSYGNFMEEFSAILHR 218
>gi|254506113|ref|ZP_05118257.1| protein TolQ [Vibrio parahaemolyticus 16]
gi|219550931|gb|EED27912.1| protein TolQ [Vibrio parahaemolyticus 16]
Length = 232
Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 113/218 (51%), Gaps = 3/218 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
DIS+ LF+Q L VK ++ L S++SW++II++S + FE FWSG L
Sbjct: 4 DISMLDLFLQASLLVKMVMLTLLGMSVVSWAMIIKRSKVLSQASKDADAFEDKFWSGTDL 63
Query: 70 ETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ ++ K + G IF S +E+ + + SP I + R M V++ARE++E
Sbjct: 64 SILYQNAKKRKDELSGTEEIFYSGFTEFARLRKSNSDSPDYIMEGTGRSMRVSVAREVDE 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ L FL ++ S +G+ G V G+M F ++ + + PGI E+L++ +GL
Sbjct: 124 LETNLPFLATVGSISPYIGLFGTVWGIMHAFIALGEVKQATLAMVAPGIAEALVATAMGL 183
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+IP+ +AYN+ K F+ EF +IL RQ
Sbjct: 184 FAAIPAVMAYNRLSNKVSKLEHNYATFSEEFHSILHRQ 221
>gi|121605813|ref|YP_983142.1| MotA/TolQ/ExbB proton channel [Polaromonas naphthalenivorans CJ2]
gi|120594782|gb|ABM38221.1| Cell division and transport-associated protein TolQ [Polaromonas
naphthalenivorans CJ2]
Length = 230
Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 112/217 (51%), Gaps = 3/217 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+SI +L + V+ ++ LL SI SW+ I +K V ++ EF++ FWSG SL
Sbjct: 4 DLSIVSLLLHASWVVQAVVALLIGISIASWAAIFRKIVALKRAQQLNDEFDRGFWSGTSL 63
Query: 70 ETVCKSLKNHHNIG--LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + I + IF S M E++K ++ + D R M + RE++
Sbjct: 64 NDLFAGAAQNAKISGSMERIFASGMREYQKLRERHISDAGTLLDGARRAMRASYQREMDA 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
I LSFL ++ S VG+ G V G+M F +A + ++ PGI E+L++ + L
Sbjct: 124 IEANLSFLATVGSVSPYVGLFGTVWGIMHAFTGLAAMEQVTLATVAPGIAEALVATAIAL 183
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
+IP+ +AYN+F D + A ++E F EFS IL R
Sbjct: 184 FAAIPAVVAYNRFAHDIDRIANRLETFIEEFSNILQR 220
>gi|146306306|ref|YP_001186771.1| MotA/TolQ/ExbB proton channel [Pseudomonas mendocina ymp]
gi|145574507|gb|ABP84039.1| Cell division and transport-associated protein TolQ [Pseudomonas
mendocina ymp]
Length = 231
Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 116/223 (52%), Gaps = 3/223 (1%)
Query: 7 AIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG 66
A+ +S+++L L V+ ++ L S++SW +I Q+S +R FE FWSG
Sbjct: 5 AVDHMSMWSLISNASLLVQLVMLTLVAASVISWVMIFQRSNAIRAAKRALDNFEDRFWSG 64
Query: 67 QSLETVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARE 124
L + + ++ + GL IF + E+ + + P + D + R M VAI+RE
Sbjct: 65 IDLSKLYRQAGSNPDPDSGLEQIFRAGFKEFSRLRQQQGVDPDAVMDGVARAMRVAISRE 124
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISIL 183
E++ L FL ++ S +G+ G V G+M F+ +A + ++ PGI E+LI+
Sbjct: 125 EEKLETALPFLATVGSTSPYIGLFGTVWGIMNSFRGLAQVQQATLATVAPGIAEALIATA 184
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+GL +IP+ IAYN+F + + FA+EF AIL R+
Sbjct: 185 IGLFAAIPAVIAYNRFSARGEMLIGRYYTFADEFQAILHRKVH 227
>gi|317047354|ref|YP_004115002.1| protein TolQ [Pantoea sp. At-9b]
gi|316948971|gb|ADU68446.1| protein TolQ [Pantoea sp. At-9b]
Length = 228
Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 115/221 (52%), Gaps = 3/221 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
+ D++I LF++ L VK I+ +L FSI SW++IIQ++ R+ FE FWSG
Sbjct: 1 MTDMNILDLFLKASLLVKLIMLILIGFSIASWAIIIQRTRILNAAGREAEAFEDKFWSGI 60
Query: 68 SLETVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
L + + + + G IF S E+ + + +P + + R M +++ REL
Sbjct: 61 ELSRLYQESQGRRDELNGSEQIFYSGFKEFARLHRANSHAPEAVVEGASRAMRISMNREL 120
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILL 184
E + + FLG++ S +G+ G V G+M F ++ + + PGI E+LI+ +
Sbjct: 121 EALENHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMVAPGIAEALIATAI 180
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
GL +IP+ +AYN+ + K + F EF+AIL RQ
Sbjct: 181 GLFAAIPAVMAYNRLNQRVNKLEQGYDNFMEEFTAILHRQA 221
>gi|253997447|ref|YP_003049511.1| protein TolQ [Methylotenera mobilis JLW8]
gi|253984126|gb|ACT48984.1| protein TolQ [Methylotenera mobilis JLW8]
Length = 224
Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 110/219 (50%), Gaps = 3/219 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S F+L L V+ ++ +L I S+ SW I K R +FE FWSG L
Sbjct: 6 DMSFFSLVAGASLPVQLVMLILIITSLFSWWYIFIKVATVKRAERDAEDFEDTFWSGGDL 65
Query: 70 ETVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ S+ H G+A+IF + E+ + + + + R M A RE++E
Sbjct: 66 NKLYDSITAHRRKPQGMASIFEAGFKEYARHKQQTRMDVSDVMEGARRAMRAAYNREMDE 125
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ L FL S+ S +G+ G V G+M F+ ++ + + PGI E+L++ +GL
Sbjct: 126 LDAHLPFLASVGSVSPYIGLFGTVWGIMNAFRGLSSVGQATLTQVAPGIAEALVATAIGL 185
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ IAYN+F + +++ E F EF+ IL R++
Sbjct: 186 FAAIPAVIAYNRFASSVDRLSVRYESFMEEFTNILQRKS 224
>gi|119477232|ref|ZP_01617468.1| TolQ protein [marine gamma proteobacterium HTCC2143]
gi|119449595|gb|EAW30833.1| TolQ protein [marine gamma proteobacterium HTCC2143]
Length = 240
Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 114/223 (51%), Gaps = 6/223 (2%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
++S++ L L V+ ++ LLFIFS +SW +I+Q+ F R + FE FWSG L
Sbjct: 4 ELSVWQLVANASLTVQAVMALLFIFSAISWFMIVQRGFYFRACNRAMQNFEHQFWSGMDL 63
Query: 70 ETVCKS-----LKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARE 124
+ + +G+ +IF + E+ + + + R M VA +RE
Sbjct: 64 SQLFRQGSADIESGASFVGMESIFRAGFKEFSRLRQQPGVDADAVMQGAQRSMRVATSRE 123
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISIL 183
E++ L FL ++ S VG+ G V G+M FQS+A + ++ PGI E+L++
Sbjct: 124 EEQMDTHLPFLATVGSISPYVGLFGTVWGIMTSFQSLATMNQATLATVAPGISEALVATA 183
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+GL +IP+ +AYN++ + + + F++EF IL RQ
Sbjct: 184 MGLFAAIPAVMAYNRYSSRVEILLNKYDSFSDEFYGILHRQAH 226
>gi|254521584|ref|ZP_05133639.1| protein TolQ [Stenotrophomonas sp. SKA14]
gi|219719175|gb|EED37700.1| protein TolQ [Stenotrophomonas sp. SKA14]
Length = 259
Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/222 (32%), Positives = 114/222 (51%), Gaps = 4/222 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
I+ L + L VK I+ LL + S +SW +I +K+ F R+ EFE FWSG L
Sbjct: 37 INYLELMAKASLPVKIIVLLLLVGSFVSWVIIFRKARVFKQATREADEFENRFWSGADLG 96
Query: 71 TVCKSLKNH-HNIG-LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ S + N+G L AIF + E+ + DK + R M RE++++
Sbjct: 97 KLYSSATDRSRNVGGLEAIFEAGFREYTRLRDKRRLDGRAQLEGAQRAMRTTYTREVDQL 156
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGL 186
L L ++ S VG++G V G+M + +G + PGI E+L + +GL
Sbjct: 157 ERNLELLANIGSTAPYVGLVGTVFGIMVTMHDMISSGAQAGIAAVAPGISEALFATAIGL 216
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
V+IP+ AYN+F ++ +++ E FA EFS+IL RQ+ G+
Sbjct: 217 FVAIPAVWAYNRFTTRVERMSVRFETFAEEFSSILQRQSAGD 258
>gi|149185614|ref|ZP_01863930.1| TolQ, tolQ protein [Erythrobacter sp. SD-21]
gi|148830834|gb|EDL49269.1| TolQ, tolQ protein [Erythrobacter sp. SD-21]
Length = 232
Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 113/212 (53%), Gaps = 2/212 (0%)
Query: 16 LFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKS 75
LF+ + V+ ++ L + SI W++I+ S+ L+ R +E FW +
Sbjct: 20 LFLDADIVVQAVMAGLILASIWVWAIIVSFSLRMNKLKSVQRNYETEFWQADQFDRFMAE 79
Query: 76 LKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFL 135
+ + +I A + + ++EW++S R ++ RI MD IA+E +++ E+L+FL
Sbjct: 80 -RGNRDIPSARVAQAGVAEWRRSTKGEVRDREALRGRIATAMDSQIAQEADDVAERLNFL 138
Query: 136 GSMSSAGLLVGILGAVLGMMG-FFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSI 194
++ + VG+ G V G+M FFQ A S+ V PGI E+L + +GL +IP+ I
Sbjct: 139 ATVGAVAPFVGLFGTVWGIMNSFFQIGAQESSSLAVVAPGISEALFATAIGLFAAIPAVI 198
Query: 195 AYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
AYN+F ++F ++ FA++ A SRQ E
Sbjct: 199 AYNRFSHTVERFESRLHRFADKLHASFSRQLE 230
>gi|304395716|ref|ZP_07377599.1| protein TolQ [Pantoea sp. aB]
gi|304357010|gb|EFM21374.1| protein TolQ [Pantoea sp. aB]
Length = 228
Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 113/221 (51%), Gaps = 3/221 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
+ D++I LF++ L VK I+ +L FSI SW++IIQ++ R+ FE FWSG
Sbjct: 1 MTDMNILDLFLKASLLVKLIMLILIGFSIASWAIIIQRTRILNAAGREAEAFEDKFWSGI 60
Query: 68 SLETVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
L + + + G IF S E+ + +P + D R M +++ REL
Sbjct: 61 ELSRLYQESQERREELGGSEQIFYSGFKEFARLHRANNHAPEAVIDGASRAMRISMNREL 120
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILL 184
E + + FLG++ S +G+ G V G+M F ++ + + PGI E+LI+ +
Sbjct: 121 EALENHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMVAPGIAEALIATAI 180
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
GL +IP+ +AYN+ + K + F EF+AIL RQ
Sbjct: 181 GLFAAIPAVMAYNRLNQRVNKLEQGYDNFMEEFTAILHRQA 221
>gi|307130106|ref|YP_003882122.1| membrane spanning protein in TolA-TolQ-TolR complex [Dickeya
dadantii 3937]
gi|16116634|emb|CAC82706.1| TolQ protein [Erwinia chrysanthemi]
gi|306527635|gb|ADM97565.1| membrane spanning protein in TolA-TolQ-TolR complex [Dickeya
dadantii 3937]
Length = 228
Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 115/225 (51%), Gaps = 6/225 (2%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D++I LF++ L VK I+ +L FSI SW++IIQ++ R FE FWSG L
Sbjct: 3 DMNILDLFLKASLLVKLIMLILIGFSIASWAIIIQRTRILNAATRDAEAFEDKFWSGIEL 62
Query: 70 ETVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + + G IF + E+ + + +P + + R M +++ RELE
Sbjct: 63 SRLYQESQTRRESLGGTEQIFYAGFKEFARLHRANSHAPEAVVEGASRAMRISMNRELET 122
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ + FLG++ S +G+ G V G+M F ++ + + PGI E+LI+ +GL
Sbjct: 123 LETHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMVAPGIAEALIATAIGL 182
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ---TEGN 228
+IP+ +AYN+ + K + F EF AIL RQ +EGN
Sbjct: 183 FAAIPAVMAYNRLNQRVNKLEQNYDNFMEEFIAILHRQAFSSEGN 227
>gi|71279709|ref|YP_268466.1| tolQ protein [Colwellia psychrerythraea 34H]
gi|71145449|gb|AAZ25922.1| tolQ protein [Colwellia psychrerythraea 34H]
Length = 228
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 117/223 (52%), Gaps = 2/223 (0%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
+ISIF LF++ + V+ ++ +L FSI+ W++I Q+ T + + FE FWSG L
Sbjct: 4 EISIFHLFLEASILVQFVMLVLLTFSIVCWAMIFQRRKILRTAAAELKAFEDKFWSGADL 63
Query: 70 ETVCKSLKNHHNI-GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ I G+ ++F++ E+ + +P I D R M VA++RE++ +
Sbjct: 64 SKLYSETSAKSQIQGIESLFIAGFKEFARLRKSHIDNPQIIVDGTHRAMRVALSREVDSL 123
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLC 187
L F+ ++ S +G+ G V G+M F ++ + + PGI E+LI+ +GL
Sbjct: 124 ETHLPFMATVGSISPYIGLFGTVWGIMNSFIALGAVKQATLAMVAPGIAEALIATAMGLF 183
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
+IP+ IA+N+F +K F +EFS+IL RQ+ S
Sbjct: 184 AAIPAVIAFNRFSHKVEKLENSYGNFMDEFSSILQRQSAAEQS 226
>gi|209517623|ref|ZP_03266461.1| protein TolQ [Burkholderia sp. H160]
gi|209501919|gb|EEA01937.1| protein TolQ [Burkholderia sp. H160]
Length = 225
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/220 (34%), Positives = 118/220 (53%), Gaps = 3/220 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+SI +L + L + ++ LL + S+LSW+ I +K R Q FE+ FWSG L
Sbjct: 6 DLSIVSLVLNASLLAQAVMALLLLLSLLSWTFIFRKWFAIRRARAQTERFERDFWSGGDL 65
Query: 70 ETVCKSL-KNHHNIG-LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + +S N H IG L IF S M E+ K +K I D R M + RE++
Sbjct: 66 QALYQSAANNRHRIGALERIFESGMREFLKGKEKRLNDSGAILDGARRAMRASFQREMDV 125
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ L+FL S+ S +G+ G V G+M F+ +A + ++ PGI E+L + +GL
Sbjct: 126 LEANLAFLASVGSVSPYIGLFGTVWGIMNAFRGLANVQQATLANVAPGIAEALTATAIGL 185
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ +AYN++ D + A++ E F EFS IL RQ +
Sbjct: 186 FAAIPAVVAYNRYAHDIDRLAIRFETFIEEFSNILQRQAQ 225
>gi|332188251|ref|ZP_08389979.1| protein TolQ [Sphingomonas sp. S17]
gi|332011750|gb|EGI53827.1| protein TolQ [Sphingomonas sp. S17]
Length = 219
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 116/217 (53%), Gaps = 2/217 (0%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+S ALF+Q VK ++ L + SI +W++I+ S ++ FE+ FW + ++
Sbjct: 1 MSPVALFLQADWVVKFVMIGLLLASIWTWTIIVAFSRKLARTKKGMTRFERDFWKAEDID 60
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
+ ++ + + A +F + + EW++S G G ++R+ M A+A E++++++
Sbjct: 61 AFHR-MEQDNELPSARVFSAGVQEWRRSTAGGHIDRDGTRERLATAMGSAVAGEIDKLSD 119
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA-GYYSNNVVSIPGIIESLISILLGLCVS 189
+L+ L ++ S VG+ G V G+M F IA S+ V PGI E+L + +GL +
Sbjct: 120 RLNVLATVGSVAPFVGLFGTVWGIMRSFTGIAQAQNSSLAVVAPGIAEALFATAIGLFAA 179
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
IP+ IAYN+F K + FA+ F LSRQ +
Sbjct: 180 IPAVIAYNRFSHGVNKVEASLNRFADGFHTTLSRQLD 216
>gi|283833966|ref|ZP_06353707.1| protein TolQ [Citrobacter youngae ATCC 29220]
gi|291070097|gb|EFE08206.1| protein TolQ [Citrobacter youngae ATCC 29220]
Length = 227
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 114/218 (52%), Gaps = 3/218 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
++I LF++ L VK I+ +L FSI SW++IIQ++ R+ FE FWSG L
Sbjct: 1 MNILDLFLKASLLVKLIMLILIGFSIASWAIIIQRTRILNAASREAEAFEDKFWSGIELS 60
Query: 71 TVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ + + + G IF S E+ + + +P + + R M +++ RELE +
Sbjct: 61 RLYQESQGRRDNLAGSEQIFYSGFKEFARLHRANSHAPEAVVEGASRAMRISMNRELETL 120
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLC 187
+ FLG++ S +G+ G V G+M F ++ + + PGI E+LI+ +GL
Sbjct: 121 ETHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMVAPGIAEALIATAIGLF 180
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ +AYN+ + K + + F EF+AIL RQ
Sbjct: 181 AAIPAVMAYNRLNQRVNKLELNYDNFMEEFTAILHRQA 218
>gi|28871120|ref|NP_793739.1| tolQ protein [Pseudomonas syringae pv. tomato str. DC3000]
gi|66044660|ref|YP_234501.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. syringae
B728a]
gi|213969188|ref|ZP_03397327.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. tomato T1]
gi|237800221|ref|ZP_04588682.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. oryzae str.
1_6]
gi|257487007|ref|ZP_05641048.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. tabaci ATCC
11528]
gi|289626499|ref|ZP_06459453.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. aesculi
str. NCPPB3681]
gi|289650945|ref|ZP_06482288.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. aesculi
str. 2250]
gi|289674674|ref|ZP_06495564.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. syringae
FF5]
gi|298488206|ref|ZP_07006242.1| MotA/TolQ/ExbB proton channel family protein [Pseudomonas
savastanoi pv. savastanoi NCPPB 3335]
gi|301384817|ref|ZP_07233235.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. tomato
Max13]
gi|302063529|ref|ZP_07255070.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. tomato K40]
gi|302130607|ref|ZP_07256597.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. tomato
NCPPB 1108]
gi|302187154|ref|ZP_07263827.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. syringae
642]
gi|28854370|gb|AAO57434.1| tolQ protein [Pseudomonas syringae pv. tomato str. DC3000]
gi|63255367|gb|AAY36463.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. syringae
B728a]
gi|213926186|gb|EEB59742.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. tomato T1]
gi|298157264|gb|EFH98348.1| MotA/TolQ/ExbB proton channel family protein [Pseudomonas
savastanoi pv. savastanoi NCPPB 3335]
gi|330868615|gb|EGH03324.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. aesculi
str. 0893_23]
gi|330872650|gb|EGH06799.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv.
morsprunorum str. M302280PT]
gi|330892243|gb|EGH24904.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. mori str.
301020]
gi|330896131|gb|EGH28352.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. japonica
str. M301072PT]
gi|330936715|gb|EGH40902.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. pisi str.
1704B]
gi|330950606|gb|EGH50866.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae Cit 7]
gi|330959268|gb|EGH59528.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. maculicola
str. ES4326]
gi|330964827|gb|EGH65087.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. actinidiae
str. M302091]
gi|330968888|gb|EGH68954.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. aceris str.
M302273PT]
gi|330988972|gb|EGH87075.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. lachrymans
str. M301315]
gi|331009351|gb|EGH89407.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. tabaci ATCC
11528]
gi|331016442|gb|EGH96498.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. lachrymans
str. M302278PT]
gi|331023078|gb|EGI03135.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. oryzae str.
1_6]
Length = 231
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 115/216 (53%), Gaps = 3/216 (1%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLET 71
S+++L + V+ ++ +L S+ SW VI Q+S RR FE+ FWSG L
Sbjct: 10 SMWSLVSNASIVVQLVMLILVAASVTSWIVIFQRSNMLRAGRRALDSFEERFWSGIDLSK 69
Query: 72 VCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+ + ++ + G+ IF + E+ + + P + + + R M VAI+RE E++
Sbjct: 70 LYRQAGSNPDPDSGVEQIFRAGFKEFSRLRQQSGVDPDAVMEGVARAMRVAISREEEKLE 129
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCV 188
L +L ++ S VG+ G V G+M F+ +A + ++ PGI E+LI+ +GL
Sbjct: 130 AGLPYLATVGSTSPYVGLFGTVWGIMNSFRGLATAQQATLATVAPGIAEALIATAIGLFA 189
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+IP+ IAYN+F S+ + FA+EF AIL R+
Sbjct: 190 AIPAVIAYNRFAARSETLISRYYTFADEFQAILHRK 225
>gi|261341327|ref|ZP_05969185.1| protein TolQ [Enterobacter cancerogenus ATCC 35316]
gi|288316632|gb|EFC55570.1| protein TolQ [Enterobacter cancerogenus ATCC 35316]
Length = 227
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 116/225 (51%), Gaps = 7/225 (3%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
++I LF++ L VK I+ +L FSI SW++IIQ++ R+ FE FWSG L
Sbjct: 1 MNILDLFLKASLLVKLIMLILIGFSIASWAIIIQRTRILNAASREAEAFEDKFWSGIELS 60
Query: 71 TVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ + + + G IF S E+ + +P + + R M +++ RELE +
Sbjct: 61 RLYQESQGRRDNLAGSEQIFYSGFKEFARLHRANNHAPEAVVEGASRAMRISMNRELETL 120
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLC 187
+ FLG++ S +G+ G V G+M F ++ + + PGI E+LI+ +GL
Sbjct: 121 ETHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMVAPGIAEALIATAIGLF 180
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ----TEGN 228
+IP+ +AYN+ + K + + F EF+AIL RQ TE N
Sbjct: 181 AAIPAVMAYNRLNQRVNKLELNYDNFMEEFTAILHRQAFTSTESN 225
>gi|227114772|ref|ZP_03828428.1| colicin uptake protein TolQ [Pectobacterium carotovorum subsp.
brasiliensis PBR1692]
Length = 225
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 113/217 (52%), Gaps = 3/217 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+++F LF++ L VK I+ +L FSI SW++IIQ++ + R+ FE FWSG L
Sbjct: 1 MNVFDLFLKASLLVKLIMLILICFSIASWAIIIQRTRILNSATREAEAFEDKFWSGIELS 60
Query: 71 TVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ + + + G IF S E+ + + +P + + R M +++ RELE +
Sbjct: 61 RLYQESQTRRDSLTGTEQIFHSGFKEFARLHRANSHAPEAVVEGASRAMRISMNRELETL 120
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLC 187
+ FLG++ S +G+ G V G+M F ++ + + PGI E+LI+ +GL
Sbjct: 121 ETHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMVAPGIAEALIATAIGLF 180
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+IP+ +AYN+ K + F EF AIL RQ
Sbjct: 181 AAIPAVMAYNRLSLRVGKLEQNYDNFTEEFIAILHRQ 217
>gi|295096557|emb|CBK85647.1| Cell division and transport-associated protein TolQ (TC 2.C.1.2.1)
[Enterobacter cloacae subsp. cloacae NCTC 9394]
Length = 227
Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 117/225 (52%), Gaps = 7/225 (3%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
++I LF++ L VK I+ +L FSI SW++IIQ++ R+ FE FWSG L
Sbjct: 1 MNILDLFLKASLLVKLIMLILIGFSIASWAIIIQRTRILNAAGREAEAFEDKFWSGIELS 60
Query: 71 TVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ + + + G IF S E+ + + +P + + R M +++ RELE +
Sbjct: 61 RLYQESQGRRDNLSGSEQIFYSGFKEFARLHRANSHAPEAVVEGASRAMRISMNRELENL 120
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLC 187
+ FLG++ S +G+ G V G+M F ++ + + PGI E+LI+ +GL
Sbjct: 121 ETHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMVAPGIAEALIATAIGLF 180
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ----TEGN 228
+IP+ +AYN+ + K + + F EF+AIL RQ TE N
Sbjct: 181 AAIPAVMAYNRLNQRVNKLELNYDNFMEEFTAILHRQAFTSTESN 225
>gi|149192084|ref|ZP_01870308.1| TolQ protein [Vibrio shilonii AK1]
gi|148834070|gb|EDL51083.1| TolQ protein [Vibrio shilonii AK1]
Length = 228
Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 113/218 (51%), Gaps = 3/218 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
DIS L ++ L V+ ++ +L S++SW++II++S + EFE FWSG L
Sbjct: 4 DISFVDLILEASLLVQLVMLILLGMSVVSWAMIIKRSKVLKQATKDSDEFEDKFWSGADL 63
Query: 70 ETVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + +K + G IF S +E+ + A SP I + R M VA++RE+E+
Sbjct: 64 SQIYQDVKKRKDDLSGTEEIFYSGFTEFLRLRKSNAESPAFIMEGTGRSMRVAVSREVED 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ L FL ++ S +G+ G V G+M F ++ + + PGI E+LI+ +GL
Sbjct: 124 LETNLPFLATVGSISPYIGLFGTVWGIMHAFIALGEVKQATLAMVAPGIAEALIATAMGL 183
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+IP+ +AYN+ K F+ EF +IL RQ
Sbjct: 184 FAAIPAVMAYNRLSNKVGKLEHNYATFSEEFHSILHRQ 221
>gi|322833834|ref|YP_004213861.1| protein TolQ [Rahnella sp. Y9602]
gi|321169035|gb|ADW74734.1| protein TolQ [Rahnella sp. Y9602]
Length = 229
Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 112/220 (50%), Gaps = 3/220 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
+ D++I LF++ + VK I+ +L FSI SW++IIQ++ R+ FE FWSG
Sbjct: 1 MTDMNILDLFLKASILVKLIMLVLVCFSIASWAIIIQRTKVLNAATREAEAFEDKFWSGI 60
Query: 68 SLETVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
L + + + G IF S E+ + + +P + + R M ++ REL
Sbjct: 61 ELSRLYQESQGRRETLSGAEQIFHSGFKEFARLHRANSHAPEAVIEGSSRAMRISFNREL 120
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILL 184
E + + FLG++ S +G+ G V G+M F + + + PGI E+LI+ +
Sbjct: 121 ESLETHIPFLGTVGSISPYIGLFGTVWGIMHAFIGLGSVKQATLQMVAPGIAEALIATAI 180
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
GL +IP+ +AYN+ + K + F EF+AIL RQ
Sbjct: 181 GLFAAIPAVMAYNRLNQRVNKLEQNYDNFMEEFTAILHRQ 220
>gi|85058861|ref|YP_454563.1| colicin uptake protein TolQ [Sodalis glossinidius str. 'morsitans']
gi|84779381|dbj|BAE74158.1| colicin import protein TolQ [Sodalis glossinidius str. 'morsitans']
Length = 228
Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/218 (32%), Positives = 114/218 (52%), Gaps = 3/218 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D++IF LF++ G VK I+ +L FSI SW++IIQ+S + R+ FE FWSG L
Sbjct: 3 DMNIFDLFLKAGFLVKLIMLILICFSIASWAIIIQRSRILTSAAREAEAFEDKFWSGIEL 62
Query: 70 ETVCK-SLKNHHNI-GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + SL ++ G IF + E+ + +P + + R M +++ RELE
Sbjct: 63 SRLYQESLTRRDSLSGSEQIFYAGFKEFARLHRANNHAPEAVVEGASRAMRISMNRELEA 122
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ + FLG++ S +G+ G V G+M F + + + PGI E+LI+ +GL
Sbjct: 123 LETHIPFLGTVGSISPYIGLFGTVWGIMHAFIGLGTVKQATLQMVAPGIAEALIATAIGL 182
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+IP+ +A+N+ K + F EF AIL RQ
Sbjct: 183 FAAIPAVMAFNRLSLRVNKLEQNYDNFTEEFIAILHRQ 220
>gi|293603407|ref|ZP_06685834.1| TolQ colicin import protein [Achromobacter piechaudii ATCC 43553]
gi|292818180|gb|EFF77234.1| TolQ colicin import protein [Achromobacter piechaudii ATCC 43553]
Length = 226
Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 115/221 (52%), Gaps = 4/221 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S+ +L + V+ I+ +L SI+SW+ I K + Q R FE FWSG L
Sbjct: 6 DMSLLSLISHASVPVQLIMLMLLGISIMSWTYIFAKRLAIKRAHTQTRRFEDDFWSGGDL 65
Query: 70 ETVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGAR-SPIGIQDRIDRMMDVAIARELE 126
+ +++ + + LA IF + M+E+ K+ A + D R M A RE++
Sbjct: 66 SMLQQAVASRRDEQGALARIFDAGMTEFLKARRGNASGDATALLDGPRRAMRAAYQREMD 125
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLG 185
+ L+FL S S +G+LG V G+M F ++ + S+ PGI E+LI+ +G
Sbjct: 126 ALESHLNFLASAGSVSPYIGLLGTVWGIMHAFIGLSNMQQATLASVAPGIAEALIATAIG 185
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
L +IP+ +AYN+F D + +++ + F +EF IL RQ
Sbjct: 186 LFAAIPAVVAYNRFTNDIDRISIRFDSFVDEFLNILQRQVR 226
>gi|258545750|ref|ZP_05705984.1| TolQ protein [Cardiobacterium hominis ATCC 15826]
gi|258518995|gb|EEV87854.1| TolQ protein [Cardiobacterium hominis ATCC 15826]
Length = 243
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 112/215 (52%), Gaps = 1/215 (0%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+S+ L + VK I+ +LF+ + + + +K V F+ LR + ++F++ FWSG LE
Sbjct: 9 LSVSRLIGDASIPVKVIMLILFMMFLTTLFITGKKYVQFLRLRHKIKQFDRTFWSGNDLE 68
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
+ + H + +F E+ + +P I R M A+ RE
Sbjct: 69 VLYAGYEKRHPESIERVFTDGFREFMQFQGNSLDNPDVIVHNCRRAMTAALNRESSRQER 128
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCVS 189
L+ L ++ S+ +G+LG V G+M F +I G S ++ S+ PGI E+LI+ +GL +
Sbjct: 129 GLNLLATIGSSAPYIGLLGTVYGIMNSFIAIGGAQSASISSVAPGIAEALIATAIGLLAA 188
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
IPS ++YN F+ S+ ++ + F EFS +L RQ
Sbjct: 189 IPSVLSYNYFVAHSESLTVEYDAFIEEFSNLLQRQ 223
>gi|146310893|ref|YP_001175967.1| colicin uptake protein TolQ [Enterobacter sp. 638]
gi|145317769|gb|ABP59916.1| Cell division and transport-associated protein TolQ [Enterobacter
sp. 638]
Length = 227
Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 73/225 (32%), Positives = 117/225 (52%), Gaps = 7/225 (3%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
++I LF++ L VK I+ +L FSI SW++IIQ++ R+ FE FWSG L
Sbjct: 1 MNILDLFLKASLLVKLIMLILIGFSIASWAIIIQRTRILNAASREAEAFEDKFWSGIELS 60
Query: 71 TVCK-SLKNHHNI-GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ + S N+ G IF S E+ + +P + + R M +++ RELE +
Sbjct: 61 RLYQESQGRRENLSGSEQIFYSGFKEFARLHRANNHAPEAVVEGASRAMRISMNRELETL 120
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLC 187
+ FLG++ S +G+ G V G+M F ++ + + PGI E+LI+ +GL
Sbjct: 121 ENHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMVAPGIAEALIATAIGLF 180
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ----TEGN 228
+IP+ +AYN+ + K + + F EF+AIL RQ TE N
Sbjct: 181 AAIPAVMAYNRLNQRVNKLELNYDNFMEEFTAILHRQAFTSTESN 225
>gi|26987954|ref|NP_743379.1| biopolymer transport protein TolQ [Pseudomonas putida KT2440]
gi|148546491|ref|YP_001266593.1| Tol-Pal system, TolQ [Pseudomonas putida F1]
gi|167035192|ref|YP_001670423.1| protein TolQ [Pseudomonas putida GB-1]
gi|170723157|ref|YP_001750845.1| protein TolQ [Pseudomonas putida W619]
gi|24982667|gb|AAN66843.1|AE016313_2 biopolymer transport protein TolQ [Pseudomonas putida KT2440]
gi|5514776|emb|CAB50778.1| TolQ protein [Pseudomonas putida]
gi|148510549|gb|ABQ77409.1| Tol-Pal system, TolQ [Pseudomonas putida F1]
gi|166861680|gb|ABZ00088.1| protein TolQ [Pseudomonas putida GB-1]
gi|169761160|gb|ACA74476.1| protein TolQ [Pseudomonas putida W619]
gi|313497570|gb|ADR58936.1| TolQ [Pseudomonas putida BIRD-1]
Length = 231
Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 115/216 (53%), Gaps = 3/216 (1%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLET 71
S+++L + V+ ++ L S+ SW +I Q+S RR FE+ FWSG L
Sbjct: 10 SMWSLVSNASVVVQLVMLTLVAASVTSWIMIFQRSTMLRAGRRALDAFEERFWSGIDLSK 69
Query: 72 VCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+ + ++ + G+ +F + E+ + + P + + + R M VAI+RE E++
Sbjct: 70 LYRQAGSNPDPDSGVEQVFRAGFKEFSRLRQQPGVDPDAVMEGVGRAMRVAISREEEKLE 129
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCV 188
+ L FL ++ S +G+ G V G+M F+ +A + ++ PGI E+LI+ +GL
Sbjct: 130 QSLPFLATVGSTSPYIGLFGTVWGIMNSFRGLASAQQATLATVAPGIAEALIATAIGLFA 189
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+IP+ IAYN+F S+ + FA+EF AIL R+
Sbjct: 190 AIPAVIAYNRFAARSEVLIGRYYTFADEFQAILHRK 225
>gi|329295945|ref|ZP_08253281.1| colicin uptake protein TolQ [Plautia stali symbiont]
Length = 228
Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 115/221 (52%), Gaps = 3/221 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
+ D+++ LF++ L VK I+ +L FSI SW++IIQ++ R+ FE FWSG
Sbjct: 1 MTDMNVLDLFLKASLLVKLIMLILIGFSIASWAIIIQRTRILNAAGREAEAFEDKFWSGI 60
Query: 68 SLETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
L + + + + G IF S E+ + + +P + + R M +++ REL
Sbjct: 61 ELSRLYQESQARRDELSGSEQIFYSGFKEFARLHRANSHAPEAVVEGAGRAMRISMNREL 120
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILL 184
E + + FLG++ S +G+ G V G+M F ++ + + PGI E+LI+ +
Sbjct: 121 EALENHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMVAPGIAEALIATAI 180
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
GL +IP+ +AYN+ + K + F EF+AIL RQ
Sbjct: 181 GLFAAIPAVMAYNRLNQRVNKLEQGYDNFMEEFTAILHRQA 221
>gi|104783070|ref|YP_609568.1| biopolymer transport protein TolQ [Pseudomonas entomophila L48]
gi|95112057|emb|CAK16784.1| biopolymer transport protein TolQ [Pseudomonas entomophila L48]
Length = 231
Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 115/216 (53%), Gaps = 3/216 (1%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLET 71
S+++L + V+ ++ L S+ SW +I Q+S RR FE+ FWSG L
Sbjct: 10 SMWSLVANASVVVQLVMLTLVAASVTSWIMIFQRSTMLRAGRRALDAFEERFWSGIDLSK 69
Query: 72 VCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+ + ++ + G+ +F + E+ + + P + + + R M VAI+RE E++
Sbjct: 70 LYRQAGSNPDPDSGVEQVFRAGFKEFSRLRQQPGVDPDAVMEGVGRAMRVAISREEEKLE 129
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCV 188
+ L FL ++ S +G+ G V G+M F+ +A + ++ PGI E+L++ +GL
Sbjct: 130 QSLPFLATVGSTSPYIGLFGTVWGIMNSFRGLASAQQATLATVAPGIAEALVATAIGLFA 189
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+IP+ IAYN+F S+ + FA+EF AIL R+
Sbjct: 190 AIPAVIAYNRFAARSEVLIGRYYTFADEFQAILHRK 225
>gi|190575565|ref|YP_001973410.1| putative TolQ transport transmembrane protein [Stenotrophomonas
maltophilia K279a]
gi|190013487|emb|CAQ47122.1| putative TolQ transport transmembrane protein [Stenotrophomonas
maltophilia K279a]
Length = 259
Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 112/222 (50%), Gaps = 4/222 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
I+ L + L VK I+ LL + S +SW +I +K+ F R+ EFE FWSG L
Sbjct: 37 INYLELMAKASLPVKIIVLLLLVGSFVSWVIIFRKARVFKQATREADEFENRFWSGADLG 96
Query: 71 TVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ + + GL AIF + E+ + DK + R M RE++++
Sbjct: 97 KLYSAATDRSRSVTGLEAIFEAGFREYTRLRDKRRLDGRAQLEGAQRAMRTTYTREVDQL 156
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGL 186
L L ++ S VG++G V G+M + +G + PGI E+L + +GL
Sbjct: 157 ERNLELLANIGSTAPYVGLVGTVFGIMVTMHDMISSGAQAGIAAVAPGISEALFATAIGL 216
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
V+IP+ AYN+F ++ +++ E FA EFS+IL RQ+ G+
Sbjct: 217 FVAIPAVWAYNRFTTRVERMSVRFETFAEEFSSILQRQSAGD 258
>gi|145632632|ref|ZP_01788366.1| TolQ [Haemophilus influenzae 3655]
gi|144986827|gb|EDJ93379.1| TolQ [Haemophilus influenzae 3655]
gi|309972456|gb|ADO95657.1| Outer membrane integrity protein TolQ [Haemophilus influenzae
R2846]
Length = 228
Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 115/221 (52%), Gaps = 3/221 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
+++ LF++ + V+ +I +L FSI+SW++IIQ+S ++ FE FWSG+ L
Sbjct: 4 ELNFLDLFLKASIVVQLVIVILISFSIISWAIIIQRSRILTNALKEAHTFEDRFWSGEDL 63
Query: 70 ETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + L N + G IF E+ + +P I R M++A+ RE+E
Sbjct: 64 NKLYEGLSNRRDGLTGSEQIFCVGFKEFSRLKQVNPDAPEAIIKGTMRAMNLAMNREIES 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ ++ FL +++S +G+ G V G+M F +++G + + PGI E+LI+ +GL
Sbjct: 124 LENRVPFLATVASVSPYIGLFGTVWGIMHAFMALSGAKQATLQMVAPGIAEALIATAIGL 183
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEG 227
+IP+ +AYN+ F +EF+ IL RQ G
Sbjct: 184 FAAIPAVMAYNRLSLRVNAIEQDYGNFIDEFTTILHRQAFG 224
>gi|307545153|ref|YP_003897632.1| biopolymer transporter TolQ [Halomonas elongata DSM 2581]
gi|307217177|emb|CBV42447.1| K03562 biopolymer transport protein TolQ [Halomonas elongata DSM
2581]
Length = 225
Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 76/220 (34%), Positives = 118/220 (53%), Gaps = 3/220 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+SI L M V+ ++ LL I S+LSW VI Q++ R+ REFE FWSG L
Sbjct: 1 MSIPHLIMNASGVVQAVMLLLLIGSLLSWVVIFQRTFVMRRARKAHREFEDRFWSGVDLN 60
Query: 71 TVCKSLKNHHN-IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+ + + +G IF + E+ + K RSP I D + R M VA +RE + +
Sbjct: 61 ELYRETPAEQDTLGTEHIFRAGFREFNRLLPK-TRSPQAILDGVQRSMRVAWSREEDRLN 119
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCV 188
L FL +++S+ +G+ G V G+MG FQS++ + ++ P I E+LI+ +GL
Sbjct: 120 LHLVFLATVASSSPYIGLFGTVWGIMGSFQSLSMAQQATLATVAPWIAEALIATAMGLFA 179
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
+IP+ I YN+ +S + + E FA EF +IL R +G
Sbjct: 180 AIPAVIFYNRLSAESSRLLGKYEDFAEEFHSILHRNLQGR 219
>gi|1685077|gb|AAC44594.1| TolQ [Haemophilus influenzae]
Length = 220
Score = 115 bits (289), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 112/215 (52%), Gaps = 3/215 (1%)
Query: 16 LFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKS 75
LF++ + V+ +I +L FSI+SW++IIQ+S ++ FE FWSG+ L + +
Sbjct: 2 LFLKASIVVQLVIVILISFSIISWAIIIQRSRILTNALKEAHTFEDRFWSGEDLNKLYEG 61
Query: 76 LKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLS 133
L N + G IF E+ + +P I R M++A+ RE+E + ++
Sbjct: 62 LSNRRDGLTGSEQIFCVGFKEFSRLKQVNPDAPEAIIKGTTRAMNLAMNREIESLENRVP 121
Query: 134 FLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCVSIPS 192
FL +++S +G+ G V G+M F +++G + + PGI E+L++ +GL +IP+
Sbjct: 122 FLATVASVSPYIGLFGTVWGIMHAFMALSGAKQATLQMVAPGIAEALVATAIGLFAAIPA 181
Query: 193 SIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEG 227
+AYN+ F +EF+ IL RQ G
Sbjct: 182 VMAYNRLSLRVNAIEQDYVNFIDEFTTILHRQAFG 216
>gi|149927729|ref|ZP_01915981.1| MotA/TolQ/ExbB proton channel [Limnobacter sp. MED105]
gi|149823555|gb|EDM82785.1| MotA/TolQ/ExbB proton channel [Limnobacter sp. MED105]
Length = 219
Score = 115 bits (289), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/218 (33%), Positives = 112/218 (51%), Gaps = 4/218 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+S +L + L V+ ++ +L + S++SW+ I +K ++Q +FE+ FWSG L
Sbjct: 1 MSFISLIAEASLVVQLVMLILVMISLISWATIFKKWAVLKRTKQQADKFEEEFWSGGDLN 60
Query: 71 TVCKSLKNHHNIG--LAAIFMSAMSEWKKSCDKGARSPIG-IQDRIDRMMDVAIARELEE 127
T+ + N L IF + MSE+ ++ DK + I D R M A RE E
Sbjct: 61 TLFQRAGMRRNDAGPLERIFEAGMSEFLRARDKKGLTDYSLIIDGARRAMKAAFQRENEI 120
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ L FL S S +G+ G V G+M F +A + S+ PGI E+LI+ +GL
Sbjct: 121 LERNLPFLASAGSVSPYIGLFGTVWGIMHAFVGLANVQQATLASVAPGIAEALIATAIGL 180
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+IP+ +AYN++ D + + Q E F EF IL RQ
Sbjct: 181 FAAIPAVVAYNRYANDIDRLSTQFESFVEEFLNILQRQ 218
>gi|229592298|ref|YP_002874417.1| TolQ protein [Pseudomonas fluorescens SBW25]
gi|229364164|emb|CAY51814.1| TolQ protein [Pseudomonas fluorescens SBW25]
Length = 231
Score = 115 bits (289), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 115/216 (53%), Gaps = 3/216 (1%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLET 71
S+++L + V+ ++ L S+ SW +I Q+S RR FE+ FWSG L
Sbjct: 10 SMWSLVSNASVVVQLVMLTLVAASVTSWVMIFQRSNLLRAGRRALESFEERFWSGIDLSK 69
Query: 72 VCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+ + ++ + G+ IF + E+ + + P + + + R M VAI+RE E++
Sbjct: 70 LYRQAGSNPDPDSGVEQIFRAGFKEFSRLRQQPGVDPEAVMEGVARAMRVAISREEEKLE 129
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCV 188
+ L FL ++ S +G+ G V G+M F+ +A + ++ PGI E+LI+ +GL
Sbjct: 130 QSLPFLATVGSVSPYIGLFGTVWGIMNSFRGLAQAQQATLATVAPGIAEALIATAIGLFA 189
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+IP+ IAYN+F S+ + FA+EF AIL R+
Sbjct: 190 AIPAVIAYNRFAATSETLIGRYYTFADEFQAILHRK 225
>gi|156934769|ref|YP_001438685.1| colicin uptake protein TolQ [Cronobacter sakazakii ATCC BAA-894]
gi|156533023|gb|ABU77849.1| hypothetical protein ESA_02609 [Cronobacter sakazakii ATCC BAA-894]
Length = 231
Score = 115 bits (289), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 115/218 (52%), Gaps = 3/218 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
++I LF++ L VK I+ +L FSI SW++IIQ++ R+ FE FWSG L
Sbjct: 1 MNILDLFLKASLLVKLIMLILIGFSIASWAIIIQRTRILNAASREAEAFEDKFWSGIELS 60
Query: 71 TVCK-SLKNHHNI-GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ + S N+ G IF + E+ + + +P I + R M +++ RELE +
Sbjct: 61 RLYQESQGRRENLSGSEQIFYAGFKEFARLHRANSHAPEAIVEGASRAMRISMNRELETL 120
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLC 187
+ FLG++ S +G+ G V G+M F ++ + + PGI E+LI+ +GL
Sbjct: 121 ETHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMVAPGIAEALIATAIGLF 180
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ +AYN+ + K + + F EF+AIL RQ
Sbjct: 181 AAIPAVMAYNRLNQRVNKLELNYDNFMEEFTAILHRQA 218
>gi|238756019|ref|ZP_04617343.1| hypothetical protein yruck0001_31500 [Yersinia ruckeri ATCC 29473]
gi|238705744|gb|EEP98137.1| hypothetical protein yruck0001_31500 [Yersinia ruckeri ATCC 29473]
Length = 225
Score = 115 bits (289), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 71/218 (32%), Positives = 110/218 (50%), Gaps = 3/218 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
++I LF+Q L VK I+ +L FSI SW++IIQ++ R FE FWSG L
Sbjct: 1 MNILDLFLQASLFVKLIMLVLMGFSIASWAIIIQRTRVLNAATRDAEAFEDKFWSGIELS 60
Query: 71 TVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ + + + G IF S E+ + + +P + D R M +++ RELE +
Sbjct: 61 RLYQESQARRDTLGGSEQIFHSGFKEFARLHRANSHAPEAVIDGASRAMRISMNRELEAL 120
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLC 187
+ FLG++ S +G+ G V G+M F S+ + + PGI E+LI+ +GL
Sbjct: 121 ENHIPFLGTVGSISPYIGLFGTVWGIMHAFISLGAVKQATLQMVAPGIAEALIATAIGLF 180
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ +AYN+ K + F EF AIL RQ
Sbjct: 181 AAIPAVMAYNRLNLHVSKLEQNYDNFMEEFIAILHRQA 218
>gi|319794184|ref|YP_004155824.1| protein tolq [Variovorax paradoxus EPS]
gi|315596647|gb|ADU37713.1| protein TolQ [Variovorax paradoxus EPS]
Length = 240
Score = 115 bits (289), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 74/217 (34%), Positives = 115/217 (52%), Gaps = 3/217 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+SI L + V+ ++ LL I SI SW+ II+K +R +FE+ FWSG SL
Sbjct: 4 DLSIINLLLHASFVVQMVVLLLVIVSIASWAAIIRKYFALRRMRALNDDFEREFWSGTSL 63
Query: 70 -ETVCKSLKNHHNIG-LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
E + +N G + IF S M E++K ++ P + D R M + REL+
Sbjct: 64 NELFASAAQNAKFAGPMERIFASGMREYQKLRERHVSDPATLLDGARRAMRASFQRELDA 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ LSFL ++ S VG+ G V G+M F +A + ++ PGI E+L++ +GL
Sbjct: 124 AEQNLSFLATVGSVSPYVGLFGTVWGIMHAFTGLAALTQVTLATVAPGIAEALVATAIGL 183
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
+IP+ + YN+F + K A+ +E + EFS IL R
Sbjct: 184 FAAIPAVVGYNRFAREIDKIAIALETYIEEFSNILQR 220
>gi|167470907|ref|ZP_02335611.1| protein TolQ [Yersinia pestis FV-1]
Length = 225
Score = 115 bits (289), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 111/218 (50%), Gaps = 3/218 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
++I LF+Q L VK I+ +L FSI SW++IIQ++ R F+ FWSG L
Sbjct: 1 MNILDLFLQASLFVKLIMLVLMGFSIASWAIIIQRTRILNAATRDAEAFKDKFWSGIELS 60
Query: 71 TVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ + + + G IF S E+ + + +P + D R M +++ RELE +
Sbjct: 61 RLYQESQARRDTLSGSEQIFHSGFKEFARLHRANSHAPEAVIDGASRAMRISMNRELEAL 120
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLC 187
+ FLG++ S +G+ G V G+M F S+ + + PGI E+LI+ +GL
Sbjct: 121 ETHIPFLGTVGSISPYIGLFGTVWGIMHAFISLGAVKQATLQMVAPGIAEALIATAIGLF 180
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ +AYN+ + K + F EF AIL RQ
Sbjct: 181 AAIPAVMAYNRLNQHVNKLEQNYDNFMEEFIAILHRQA 218
>gi|300722394|ref|YP_003711680.1| inner membrane protein [Xenorhabdus nematophila ATCC 19061]
gi|297628897|emb|CBJ89480.1| inner membrane protein required for outer membrane integrity,
uptake of group A colicins and phage DNA [Xenorhabdus
nematophila ATCC 19061]
Length = 226
Score = 115 bits (289), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 113/218 (51%), Gaps = 3/218 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
++I LF++ G V+ I+ +L FSI+SW++IIQ++ R+ FE FWSG L
Sbjct: 1 MNILDLFLKAGFLVQLIMLILIGFSIVSWAIIIQRTKILNAASREAEAFEDKFWSGIELS 60
Query: 71 TVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ K ++ + G IF S E+ + + +P + R M +++ RELE +
Sbjct: 61 RLYKESQSRRDSLSGAEQIFHSGFKEFARLHQANSHAPEAVITGASRAMRISLNRELETL 120
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLC 187
+ FLG++ S +G+ G V G+M F ++ + + PGI E+LI+ +GL
Sbjct: 121 ENHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMVAPGIAEALIATAIGLF 180
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ +AYN+ + K + F EF AIL RQ
Sbjct: 181 AAIPAVMAYNRLNQRVNKLEQTYDNFMEEFLAILHRQA 218
>gi|51473504|ref|YP_067261.1| TolQ protein [Rickettsia typhi str. Wilmington]
gi|13235454|emb|CAC33747.1| TolQ protein [Rickettsia typhi]
gi|51459816|gb|AAU03779.1| TolQ protein [Rickettsia typhi str. Wilmington]
Length = 241
Score = 115 bits (289), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 73/205 (35%), Positives = 119/205 (58%), Gaps = 3/205 (1%)
Query: 25 KCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGL 84
K ++ +L I SI SWS+I+ K + ++R+ + FE +FWSG LE + +S+K N L
Sbjct: 33 KSVMLMLLIASIWSWSIILHKIFSLAQVQRRIQSFENVFWSGCVLEQLYESIKKSVNNPL 92
Query: 85 AAIFMSAMSEWKKSCDKGARSPI--GIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAG 142
A IF+SAM E KG + ++RI M +A RE+E++ + L+ L ++ S+
Sbjct: 93 ALIFVSAMDECNSLNTKGFSEALKNNHKERIMSAMYLAQNREIEKLEKYLNVLATVGSSA 152
Query: 143 LLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIE 201
VG+ G V G+M FQSIA + ++ V PGI E+L++ +GL V+IP+ I YN +
Sbjct: 153 PFVGLFGTVWGIMHSFQSIALSKNTSLAVVAPGIAEALLATAIGLFVAIPAVIFYNYLMS 212
Query: 202 DSKKFAMQMEGFANEFSAILSRQTE 226
++E F +E ++ILS+ +
Sbjct: 213 RITLINNKIEDFISELNSILSKAID 237
>gi|82703830|ref|YP_413396.1| MotA/TolQ/ExbB proton channel [Nitrosospira multiformis ATCC 25196]
gi|82411895|gb|ABB76004.1| Cell division and transport-associated protein TolQ [Nitrosospira
multiformis ATCC 25196]
Length = 228
Score = 115 bits (289), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 108/221 (48%), Gaps = 3/221 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S+F L L V+ ++ LL I S++SW I +K RQ EFE +FW G L
Sbjct: 8 DMSLFQLVGSASLPVQLVMLLLVIASLMSWWYIFRKLFVIREAERQCDEFENVFWKGTDL 67
Query: 70 ETVCKSLK-NHHNIG-LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ +S + H G + IF + E+ K + D R M RE++
Sbjct: 68 NALFQSAAASRHTAGSMERIFEAGFREFMKHRRQPGMDTGTAMDSTRRAMRATYQREMDR 127
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ LSFL ++ S VG+ G V G+M F+ ++ + + PGI E+LI+ +GL
Sbjct: 128 LESHLSFLATVGSVSPYVGLFGTVWGIMNSFRGLSNVAQATIAHVAPGIAEALIATAMGL 187
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEG 227
+IP+ IAYN++ + A + E F E S +L RQ G
Sbjct: 188 FAAIPAVIAYNRYASSMDRLATRFESFMEEMSNVLQRQAGG 228
>gi|87118955|ref|ZP_01074853.1| TolQ protein [Marinomonas sp. MED121]
gi|86165346|gb|EAQ66613.1| TolQ protein [Marinomonas sp. MED121]
Length = 226
Score = 115 bits (288), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 104/197 (52%), Gaps = 3/197 (1%)
Query: 35 SILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSL--KNHHNIGLAAIFMSAM 92
S+ SW VI Q+ ++ R FE LFWSG L + + + + G+ IF + +
Sbjct: 25 SVFSWVVIFQRIRVLRNAKKVRRTFEDLFWSGMDLSQLYRQITAEGRRIEGIENIFTAGI 84
Query: 93 SEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVL 152
E+ + P + + + R M VA+ARE E++ + L FL ++ S VG+ G V
Sbjct: 85 KEFTRLRQSANMDPDAVMEGVQRSMRVALAREEEKLDQHLPFLATVGSTSPYVGLFGTVW 144
Query: 153 GMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
G+M F +A + ++ PGI E+LI+ +GL +IP+ I YN+F S A+ E
Sbjct: 145 GIMHSFIGLAEVQQATLATVAPGIAEALIATAIGLLAAIPAVICYNRFSATSDALAINYE 204
Query: 212 GFANEFSAILSRQTEGN 228
F++EFS+IL R+ G
Sbjct: 205 TFSDEFSSILHRKVHGR 221
>gi|325274577|ref|ZP_08140635.1| protein TolQ [Pseudomonas sp. TJI-51]
gi|324100304|gb|EGB98092.1| protein TolQ [Pseudomonas sp. TJI-51]
Length = 231
Score = 115 bits (288), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 115/216 (53%), Gaps = 3/216 (1%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLET 71
S+++L + V+ ++ L S+ SW +I Q+S RR FE+ FWSG L
Sbjct: 10 SMWSLVSNASVVVQLVMLTLVAASVTSWIMIFQRSAMLRAGRRALDAFEERFWSGIDLSK 69
Query: 72 VCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+ + ++ + G+ +F + E+ + + P + + + R M VAI+RE E++
Sbjct: 70 LYRQAGSNPDPDSGVEQVFRAGFKEFSRLRQQPGVDPDAVMEGVGRAMRVAISREEEKLE 129
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCV 188
+ L FL ++ S +G+ G V G+M F+ +A + ++ PGI E+L++ +GL
Sbjct: 130 QSLPFLATVGSTSPYIGLFGTVWGIMNSFRGLASAQQATLATVAPGIAEALVATAIGLFA 189
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+IP+ IAYN+F S+ + FA+EF AIL R+
Sbjct: 190 AIPAVIAYNRFAARSEVLIGRYYTFADEFQAILHRK 225
>gi|152996213|ref|YP_001341048.1| Tol-Pal system TolQ [Marinomonas sp. MWYL1]
gi|150837137|gb|ABR71113.1| Tol-Pal system TolQ [Marinomonas sp. MWYL1]
Length = 226
Score = 115 bits (288), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 111/217 (51%), Gaps = 3/217 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+SI+ L V+ ++ +L SI SW VI Q+ ++ FE+ FWSG L
Sbjct: 1 MSIWGLIASASFVVQLVMLILLAASIFSWIVIFQRIRVLKEAKKVRTAFEESFWSGIDLS 60
Query: 71 TVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ + L G+ IF S + E+ + P I D + R M VA+ RE E++
Sbjct: 61 QLYRKLTQEGRKVEGMENIFTSGIKEFTRLRQSHNVDPEAIMDGVQRAMRVALYREEEKL 120
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLC 187
+ L FL ++ S +G+ G V G+M F +A + ++ PGI E+LI+ +GL
Sbjct: 121 DQHLPFLATVGSTSPYIGLFGTVWGIMHSFIGLAEVQQATLATVAPGIAEALIATAIGLA 180
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+IP+ IAYN+F ++ E FA+EF++IL R+
Sbjct: 181 AAIPAVIAYNRFSSTAESLGSSYENFADEFTSILHRK 217
>gi|238920741|ref|YP_002934256.1| colicin uptake protein TolQ [Edwardsiella ictaluri 93-146]
gi|238870310|gb|ACR70021.1| protein TolQ, putative [Edwardsiella ictaluri 93-146]
Length = 227
Score = 115 bits (288), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 111/219 (50%), Gaps = 3/219 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D++I LF++ L VK I+ +L FS+ SW++IIQ++ R FE FWSG L
Sbjct: 3 DMNILDLFLKASLLVKLIMLVLICFSVASWAIIIQRTRILNAATRDAEAFEDKFWSGIEL 62
Query: 70 ETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + + + G IF S E+ + + +P G+ + R M +++ RE+E
Sbjct: 63 SRLYQESQTRRDGLSGSEQIFYSGFKEFARLHRMNSHAPEGVIEGASRAMRISLNREIEA 122
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ + FLG++ S +G+ G V G+M F + + + PGI E+LI+ +GL
Sbjct: 123 MENHIPFLGTVGSISPYIGLFGTVWGIMHAFIGLGAVKQATLQMVAPGIAEALIATAIGL 182
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ +AYN+ K E F EF AIL RQ
Sbjct: 183 FAAIPAVMAYNRLNLRVNKLEQNYENFMEEFIAILHRQA 221
>gi|192362359|ref|YP_001981528.1| tolQ protein [Cellvibrio japonicus Ueda107]
gi|190688524|gb|ACE86202.1| tolQ protein [Cellvibrio japonicus Ueda107]
Length = 228
Score = 115 bits (287), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 115/219 (52%), Gaps = 3/219 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+SI L +Q V+ ++ +L + S++SW++I Q+ F FE+ FWSG L
Sbjct: 8 LSITHLILQASFLVQLVMLILVLASVISWAMIFQRERYQRKASSAFSYFEKQFWSGIDLN 67
Query: 71 TVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ + ++ G+ IF + E+ + I + R M VA+ARE E++
Sbjct: 68 QLYRQGNGRTDLAEGIENIFRAGFKEFTRLRQTAGADSDAIMEGSMRAMRVALAREQEKL 127
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLC 187
E L FL S++S +G+ G V G+M F +IA ++ ++ PGI E+LI+ +GL
Sbjct: 128 EENLPFLASVASVSPYIGLFGTVWGIMVSFLNIANAGQPSLATVAPGIAEALIATAMGLF 187
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ +AYNKF ++ + FA EFSAIL RQ
Sbjct: 188 AAIPAVLAYNKFSARAESLLSNYQTFAEEFSAILHRQVH 226
>gi|84388526|ref|ZP_00991073.1| TolQ protein [Vibrio splendidus 12B01]
gi|84377075|gb|EAP93946.1| TolQ protein [Vibrio splendidus 12B01]
Length = 227
Score = 115 bits (287), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 113/218 (51%), Gaps = 3/218 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
+ISI L ++ L VK ++ +L S++SW++II++S +Q FE FWSG L
Sbjct: 4 EISILGLILEASLLVKMVMLILMGMSVVSWAMIIKRSKVLSQASKQTDVFEDKFWSGVDL 63
Query: 70 ETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + + G IF + +E+ + A SP I + R M VA+ARE++E
Sbjct: 64 AKLYQESNKRKDELSGTEEIFYAGFTEFARLRKSNATSPDFIMEGTGRAMRVAVAREVDE 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ L FL ++ S +G+ G V G+M F ++ + + PGI E+LI+ +GL
Sbjct: 124 LETNLPFLATVGSISPYIGLFGTVWGIMHSFIALGEVKQATLAMVAPGIAEALIATAMGL 183
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+IP+ +AYN+F K F+ EF +IL RQ
Sbjct: 184 FAAIPAVMAYNRFSSRVGKLEHNYATFSEEFHSILHRQ 221
>gi|148977422|ref|ZP_01814022.1| tol biopolymer transport system, TolQ protein [Vibrionales
bacterium SWAT-3]
gi|145963374|gb|EDK28639.1| tol biopolymer transport system, TolQ protein [Vibrionales
bacterium SWAT-3]
Length = 227
Score = 115 bits (287), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 112/218 (51%), Gaps = 3/218 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
+ISI L ++ L VK ++ L S++SW++II++S +Q FE FWSG L
Sbjct: 4 EISILGLILEASLLVKMVMLTLMGMSVVSWAMIIKRSKVLSQASKQAEVFEDKFWSGVDL 63
Query: 70 ETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + + G IF + +E+ + A SP I + R M VA+ARE++E
Sbjct: 64 AKLYQESNKRKDELSGTEEIFYAGFTEFARLRKSNATSPDFIMEGTGRAMRVAVAREVDE 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ L FL ++ S +G+ G V G+M F ++ + + PGI E+LI+ +GL
Sbjct: 124 LETNLPFLATVGSISPYIGLFGTVWGIMHSFIALGEVKQATLAMVAPGIAEALIATAMGL 183
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+IP+ +AYN+F K F+ EF +IL RQ
Sbjct: 184 FAAIPAVMAYNRFSSSVGKLEHNYATFSEEFHSILHRQ 221
>gi|323496597|ref|ZP_08101650.1| hypothetical protein VISI1226_13296 [Vibrio sinaloensis DSM 21326]
gi|323318343|gb|EGA71301.1| hypothetical protein VISI1226_13296 [Vibrio sinaloensis DSM 21326]
Length = 232
Score = 115 bits (287), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 111/218 (50%), Gaps = 3/218 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
+IS+ LF+Q L VK ++ L SI SW++II++S + FE FWSG L
Sbjct: 4 EISMLDLFLQASLLVKMVMLTLLGMSIASWAMIIKRSKVLSQAAKDAEAFEDKFWSGTDL 63
Query: 70 ETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + + + G IF S +E+ + + SP I + R M VA+ARE++E
Sbjct: 64 AVLYQKAQKRKDELAGTEEIFYSGFTEFARLRKSNSDSPDFIMEGTGRSMRVAVAREVDE 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ L FL ++ S +G+ G V G+M F ++ + + PGI E+L++ +GL
Sbjct: 124 LETNLPFLATVGSISPYIGLFGTVWGIMHAFIALGEVKQATLAMVAPGIAEALVATAMGL 183
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+IP+ +AYN+ K F+ EF +IL RQ
Sbjct: 184 FAAIPAVMAYNRLSNKVGKLEHNYATFSEEFHSILHRQ 221
>gi|149910562|ref|ZP_01899201.1| Putative TolQ protein [Moritella sp. PE36]
gi|149806405|gb|EDM66378.1| Putative TolQ protein [Moritella sp. PE36]
Length = 230
Score = 115 bits (287), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 113/219 (51%), Gaps = 3/219 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
DIS F LF + + VK ++ +L S+ SW++I +S + FE FWSG L
Sbjct: 5 DISFFELFWEASILVKAVMLILLSMSVASWAMIFHRSKALTQANEASKRFEDRFWSGIDL 64
Query: 70 ETVCK-SLKNHHNI-GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ K S +NI G+ IF + E+ + + + I D R M VA++RE++E
Sbjct: 65 SKLYKESDARKNNIQGMELIFHAGFKEYVRIHNADQDNTDAIMDGSYRTMRVALSREVDE 124
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ L+ L ++ S +G+ G V G+M F ++ + + PGI E+LI+ +GL
Sbjct: 125 LEVHLNNLATIGSISPYIGLFGTVWGIMSSFIALGAVQQATLAMVAPGIAEALIATAMGL 184
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ IAYN+F + + F EFS+IL RQT
Sbjct: 185 FAAIPAVIAYNRFSDQVMRIENNYANFMEEFSSILHRQT 223
>gi|86146490|ref|ZP_01064813.1| TolQ protein [Vibrio sp. MED222]
gi|218709107|ref|YP_002416728.1| TolQ protein [Vibrio splendidus LGP32]
gi|85835753|gb|EAQ53888.1| TolQ protein [Vibrio sp. MED222]
gi|218322126|emb|CAV18240.1| TolQ protein [Vibrio splendidus LGP32]
Length = 227
Score = 115 bits (287), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 113/218 (51%), Gaps = 3/218 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
+ISI L ++ L VK ++ +L S++SW++II++S +Q FE FWSG L
Sbjct: 4 EISILGLILEASLLVKMVMLILMGMSVVSWAMIIKRSKVLSQATKQTDVFEDKFWSGVDL 63
Query: 70 ETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + + G IF + +E+ + A SP I + R M VA+ARE++E
Sbjct: 64 AKLYQESNKRKDELSGTEEIFYAGFTEFARLRKSNAASPDFIMEGTGRAMRVAVAREVDE 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ L FL ++ S +G+ G V G+M F ++ + + PGI E+LI+ +GL
Sbjct: 124 LETNLPFLATVGSISPYIGLFGTVWGIMHSFIALGEVKQATLAMVAPGIAEALIATAMGL 183
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+IP+ +AYN+F K F+ EF +IL RQ
Sbjct: 184 FAAIPAVMAYNRFSSRVGKLEHNYATFSEEFHSILHRQ 221
>gi|110833616|ref|YP_692475.1| biopolymer transport protein TolQ [Alcanivorax borkumensis SK2]
gi|110646727|emb|CAL16203.1| biopolymer transport protein TolQ [Alcanivorax borkumensis SK2]
Length = 228
Score = 115 bits (287), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 113/221 (51%), Gaps = 4/221 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+S+ +L + V+ ++ LL + S+ SW +I+ + +R R FE FWS L
Sbjct: 7 MSVVSLISNATVVVQLVMALLILASLTSWYMIVGRFRVLGRAQRAGRAFEGKFWSSDDLA 66
Query: 71 TVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
++ + ++ G AIF + E+ + K AR + D R M VA+ RE +
Sbjct: 67 SLYNQSRKEPDLDSGSEAIFRAGFQEFVR-LSKSARGGEAVMDGAQRAMRVALQREQTRL 125
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
T+ L FL ++ S VG+ G V G+M F ++A + V PGI E+LI+ +GL
Sbjct: 126 TKHLPFLATVGSTSPYVGLFGTVWGIMNSFMALANVKQATLSVVAPGIAEALIATAIGLF 185
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
+IP+ +AYN+F S + E FA EFS++L RQ G
Sbjct: 186 AAIPAVMAYNRFSAQSDALLTENEMFAEEFSSVLHRQAHGR 226
>gi|194366894|ref|YP_002029504.1| protein TolQ [Stenotrophomonas maltophilia R551-3]
gi|194349698|gb|ACF52821.1| protein TolQ [Stenotrophomonas maltophilia R551-3]
Length = 259
Score = 114 bits (286), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 113/222 (50%), Gaps = 4/222 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
I+ L + L VK I+ L + S +SW +I +K+ F R+ EFE FWSG L
Sbjct: 37 INYLELMAKASLPVKIIVLALLVGSFVSWVIIFRKARIFKQATREADEFENRFWSGADLG 96
Query: 71 TVCKSLKNH-HNIG-LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ S + N+G L AIF + E+ + DK + R M RE++++
Sbjct: 97 KLYSSATDRSRNVGGLEAIFEAGFREYSRLRDKRRLDGRAQLEGAQRAMRTTYTREVDQL 156
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGL 186
L L ++ S VG++G V G+M + +G + PGI E+L + +GL
Sbjct: 157 ERNLELLANIGSTAPYVGLVGTVFGIMVTMHDMISSGAQAGIAAVAPGISEALFATAIGL 216
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
V+IP+ AYN+F ++ +++ E FA EFS+IL RQ+ G+
Sbjct: 217 FVAIPAVWAYNRFTTRVERMSVRFETFAEEFSSILQRQSAGD 258
>gi|320539142|ref|ZP_08038813.1| membrane spanning protein in TolA-TolQ-TolR complex [Serratia
symbiotica str. Tucson]
gi|320030780|gb|EFW12788.1| membrane spanning protein in TolA-TolQ-TolR complex [Serratia
symbiotica str. Tucson]
Length = 227
Score = 114 bits (286), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 112/219 (51%), Gaps = 3/219 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D++I LF++ L VK I+ +L FS+ SW++IIQ++ R FE FWSG L
Sbjct: 3 DMNILDLFLKASLLVKLIMLILICFSVASWAIIIQRTRILNAATRDAEAFEDKFWSGVEL 62
Query: 70 ETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + + + G IF + E+ + +P + + R M +++ RELE
Sbjct: 63 SRLYQESQARRDSLTGSEQIFYAGFKEFARLHRANKHAPESVIEGALRAMRISMNRELEA 122
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ +SFLG++ S +G+ G V G+M F ++ + + PGI E+LI+ +GL
Sbjct: 123 LENHISFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLHMVAPGIAEALIATAIGL 182
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ +AYN+ + K F EF+AIL RQ
Sbjct: 183 FAAIPAVMAYNRLNQRVNKIEQNYGNFMEEFTAILHRQA 221
>gi|254294747|ref|YP_003060770.1| protein TolQ [Hirschia baltica ATCC 49814]
gi|254043278|gb|ACT60073.1| protein TolQ [Hirschia baltica ATCC 49814]
Length = 266
Score = 114 bits (286), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 74/222 (33%), Positives = 116/222 (52%), Gaps = 10/222 (4%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D S AL + G VK ++ +L I SI SW V K R++ R+FE+ FWSGQ L
Sbjct: 41 DFSFLALILAAGPVVKVVMLVLVIMSIWSWMVTFDKWTGMGAARKKGRQFEEAFWSGQPL 100
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKS------CDKGARSPIGIQDRIDRMMDVAIAR 123
+ + + + + LA ++ + EW+++ D A S + R M+VA+ R
Sbjct: 101 DEMDDRVGDKPSDALARVYSAGSREWREARRLRTLTDTVATS---LLQRARSQMNVAVNR 157
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA-GYYSNNVVSIPGIIESLISI 182
E + + LS L +SS+ +G+ G V G+M F+ I +N V PG+ E+L +
Sbjct: 158 EAARLEKGLSTLAIISSSAPFIGLFGTVWGIMTAFRDIGMAGETNLAVVAPGMAEALFAT 217
Query: 183 LLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
LGL +IP+ + YNKF + KF M+ FA EF+ +SR+
Sbjct: 218 ALGLLAAIPAMMFYNKFSGEVNKFVEHMDTFAEEFTVRISRR 259
>gi|283479099|emb|CAY75015.1| Protein tolQ [Erwinia pyrifoliae DSM 12163]
Length = 228
Score = 114 bits (286), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 112/219 (51%), Gaps = 3/219 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D++I LF++ L VK I+ +L FSI SW+VIIQ++ R FE FWSG L
Sbjct: 3 DMNILDLFLKASLLVKLIMLILIGFSIASWAVIIQRTRILNAAVRDADAFEDKFWSGIEL 62
Query: 70 ETVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + ++ + G IF + E+ + +P + + R M +++ RELE
Sbjct: 63 SRLYQESQSRRDELGGSEQIFFAGFKEFARLHRANNHAPEAVVEGATRAMRISMNRELEA 122
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ + FLG++ S +G+ G V G+M F ++ + + PGI E+LI+ +GL
Sbjct: 123 LENHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMVAPGIAEALIATAIGL 182
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ +AYN+ K + F EF+AIL RQ
Sbjct: 183 FAAIPAVMAYNRLTLRVNKLEQNYDNFMEEFTAILHRQA 221
>gi|312882594|ref|ZP_07742334.1| hypothetical protein VIBC2010_09537 [Vibrio caribbenthicus ATCC
BAA-2122]
gi|309369754|gb|EFP97266.1| hypothetical protein VIBC2010_09537 [Vibrio caribbenthicus ATCC
BAA-2122]
Length = 232
Score = 114 bits (286), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 114/224 (50%), Gaps = 3/224 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
I D S+ L ++ V+ ++ +L S++SW++II++S + FE FWSG
Sbjct: 2 IGDTSMLDLILKASFLVQLVMMILLGMSVISWAMIIKRSKVLSKAAKDADSFEDKFWSGA 61
Query: 68 SLETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
L + ++ K + +G IF S +E+ + + SP + + R M VA+ARE+
Sbjct: 62 DLSILYQNAKKRKDDLMGTEEIFYSGFTEFARLRKSNSDSPDFVMEGTGRAMRVAVAREV 121
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILL 184
+++ L FL ++ S +G+ G V G+M F + + ++ PGI E+LI+ +
Sbjct: 122 DDLEANLPFLATVGSISPYIGLFGTVWGIMHAFMELGQVKQATLATVAPGIAEALIATAM 181
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
GL +IP+ +AYN+ K F+ EF +IL RQ N
Sbjct: 182 GLFAAIPAVMAYNRLSNKVGKLEHNYATFSEEFHSILHRQAMAN 225
>gi|292898895|ref|YP_003538264.1| TolQ colicin import protein [Erwinia amylovora ATCC 49946]
gi|291198743|emb|CBJ45852.1| TolQ colicin import protein [Erwinia amylovora ATCC 49946]
Length = 228
Score = 114 bits (286), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 112/219 (51%), Gaps = 3/219 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D++I LF++ L VK I+ +L FSI SW+VIIQ++ R FE FWSG L
Sbjct: 3 DMNILDLFLKASLLVKLIMLILIGFSIASWAVIIQRTRILNAAVRDADAFEDKFWSGIEL 62
Query: 70 ETVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + ++ + G IF + E+ + +P + + R M +++ RELE
Sbjct: 63 SRLYQESQSRRDELGGSEQIFYAGFKEFARLHRANNHAPEAVVEGATRAMRISMNRELEA 122
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ + FLG++ S +G+ G V G+M F ++ + + PGI E+LI+ +GL
Sbjct: 123 LENHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMVAPGIAEALIATAIGL 182
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ +AYN+ K + F EF+AIL RQ
Sbjct: 183 FAAIPAVMAYNRLTLRVNKLEQNYDNFMEEFTAILHRQA 221
>gi|312962756|ref|ZP_07777244.1| biopolymer transport protein TolQ [Pseudomonas fluorescens WH6]
gi|311282973|gb|EFQ61566.1| biopolymer transport protein TolQ [Pseudomonas fluorescens WH6]
Length = 231
Score = 114 bits (285), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 115/216 (53%), Gaps = 3/216 (1%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLET 71
S+++L + V+ ++ +L S+ SW +I Q+S RR FE+ FWSG L
Sbjct: 10 SMWSLVSNASVVVQLVMLILVAASVTSWVMIFQRSNLLRAGRRALESFEERFWSGIDLSK 69
Query: 72 VCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+ + ++ + G+ IF + E+ + + P + + + R M VAI+RE E++
Sbjct: 70 LYRQAGSNPDPDSGVEQIFRAGFKEFSRLRQQPGVDPEAVMEGVARAMRVAISREEEKLE 129
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCV 188
+ L FL ++ S +G+ G V G+M F+ +A + ++ PGI E+L++ +GL
Sbjct: 130 QSLPFLATVGSVSPYIGLFGTVWGIMNSFRGLAQAQQATLATVAPGIAEALVATAIGLFA 189
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+IP+ IAYN+F + + FA+EF AIL R+
Sbjct: 190 AIPAVIAYNRFAARGENLIGRYYTFADEFQAILHRK 225
>gi|157369519|ref|YP_001477508.1| colicin uptake protein TolQ [Serratia proteamaculans 568]
gi|270263782|ref|ZP_06192051.1| hypothetical protein SOD_e04120 [Serratia odorifera 4Rx13]
gi|293397225|ref|ZP_06641498.1| TolQ colicin import protein [Serratia odorifera DSM 4582]
gi|157321283|gb|ABV40380.1| Tol-Pal system TolQ [Serratia proteamaculans 568]
gi|270042666|gb|EFA15761.1| hypothetical protein SOD_e04120 [Serratia odorifera 4Rx13]
gi|291420245|gb|EFE93501.1| TolQ colicin import protein [Serratia odorifera DSM 4582]
Length = 224
Score = 114 bits (285), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 111/218 (50%), Gaps = 3/218 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
++I LF++ L VK I+ +L FS+ SW++IIQ++ R FE FWSG L
Sbjct: 1 MNILDLFLKASLLVKLIMLILICFSVASWAIIIQRTRILNAATRDAEAFEDKFWSGIELS 60
Query: 71 TVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ + + + G IF S E+ + +P + + R M +++ RELE +
Sbjct: 61 RLYQESQARRDSLTGSEQIFHSGFKEFARLHRANNHAPESVIEGASRAMRISMNRELETL 120
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLC 187
+ FLG++ S +G+ G V G+M F ++ + + PGI E+LI+ +GL
Sbjct: 121 ENHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMVAPGIAEALIATAIGLF 180
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ +AYN+ + K + F EF+AIL RQ
Sbjct: 181 AAIPAVMAYNRLNQRVNKLEQNYDNFMEEFTAILHRQA 218
>gi|308186080|ref|YP_003930211.1| Protein tolQ [Pantoea vagans C9-1]
gi|308056590|gb|ADO08762.1| Protein tolQ [Pantoea vagans C9-1]
Length = 225
Score = 114 bits (285), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 111/218 (50%), Gaps = 3/218 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
++I LF++ L VK I+ +L FSI SW++IIQ++ R+ FE FWSG L
Sbjct: 1 MNILDLFLKASLLVKLIMLILIGFSIASWAIIIQRTRILNAAGREAEAFEDKFWSGIELS 60
Query: 71 TVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ + + G IF S E+ + +P + D R M +++ RELE +
Sbjct: 61 RLYQESQERREELGGSEQIFYSGFKEFARLHRANNHAPEAVIDGASRAMRISMNRELEAL 120
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLC 187
+ FLG++ S +G+ G V G+M F ++ + + PGI E+LI+ +GL
Sbjct: 121 ENHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMVAPGIAEALIATAIGLF 180
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ +AYN+ + K + F EF+AIL RQ
Sbjct: 181 AAIPAVMAYNRLNQRVNKLEQGYDNFMEEFTAILHRQA 218
>gi|319786282|ref|YP_004145757.1| protein TolQ [Pseudoxanthomonas suwonensis 11-1]
gi|317464794|gb|ADV26526.1| protein TolQ [Pseudoxanthomonas suwonensis 11-1]
Length = 258
Score = 114 bits (285), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 114/219 (52%), Gaps = 4/219 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
I+ L ++ L VK I+ LL S++SW +I +K +F ++ EFE FWSG L
Sbjct: 36 INYLDLMLRASLPVKLIVLLLLAGSLISWVIIFRKLGSFKRADQEADEFENRFWSGADLG 95
Query: 71 TVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ + + + + GL AIF + E+ + DK + R M VA +RE+ ++
Sbjct: 96 KLYAAATDRNRVVGGLEAIFEAGFREFTRLRDKRRHDGRAQLEGAQRAMRVAFSREVGQL 155
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSN-NVVSI-PGIIESLISILLGL 186
L L ++ S VG++G V G+M + + S+ PGI E+L + +GL
Sbjct: 156 ERNLELLANIGSTAPYVGLVGTVFGIMVTMHDMVSQGQQVGIASVAPGISEALFATAIGL 215
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
V+IP+ AYN++ + + + E FA+EFS+IL RQT
Sbjct: 216 FVAIPAVWAYNRYTSRVDRLSQRYESFADEFSSILQRQT 254
>gi|188534423|ref|YP_001908220.1| colicin uptake protein TolQ [Erwinia tasmaniensis Et1/99]
gi|188029465|emb|CAO97342.1| TolQ colicin import protein [Erwinia tasmaniensis Et1/99]
Length = 228
Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 111/218 (50%), Gaps = 3/218 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D++I LF++ L VK I+ +L FSI SW+VIIQ++ R FE FWSG L
Sbjct: 3 DMNILDLFLKASLLVKLIMLILIGFSIASWAVIIQRTRILNAAVRDADAFEDKFWSGMEL 62
Query: 70 ETVCKS--LKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + ++ G IF + E+ + +P + + R M +++ RELE
Sbjct: 63 SRLYQESQVRRDELGGSEQIFYAGFKEFARLHRANNHAPEAVVEGATRAMRISMNRELET 122
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ + FLG++ S +G+ G V G+M F ++ + + PGI E+LI+ +GL
Sbjct: 123 LENHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMVAPGIAEALIATAIGL 182
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+IP+ +AYN+ K + F EF+AIL RQ
Sbjct: 183 FAAIPAVMAYNRLTLRVNKLEQNYDNFMEEFTAILHRQ 220
>gi|254516706|ref|ZP_05128765.1| protein TolQ [gamma proteobacterium NOR5-3]
gi|219675129|gb|EED31496.1| protein TolQ [gamma proteobacterium NOR5-3]
Length = 236
Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 113/222 (50%), Gaps = 6/222 (2%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
++SI L M G+ VK ++ LL S+ SW +I Q+ F + + +FE+ FWSG L
Sbjct: 3 ELSIIDLVMDAGVTVKLVMALLMAASVSSWYMIFQRFFYFRSAGAEMLDFEEHFWSGVDL 62
Query: 70 ETVCKSLKNHHN-----IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARE 124
+ + IG+ +F + E+ + + + + R M VA+ RE
Sbjct: 63 AQLYREGNERAADGEIIIGVEGVFRAGFKEFSRLAQQSDMDAEAMLEGARRAMRVAMMRE 122
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISIL 183
E + + L FL ++ S VG+ G V G+M F+ +A + ++ PGI E+L++
Sbjct: 123 EERLEQHLPFLATVGSTSPYVGLFGTVWGIMNSFRGLANTSQATLATVAPGISEALVATA 182
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+GL +IP+ +AYN+F + + + F +EFS+IL RQ
Sbjct: 183 MGLFAAIPAVMAYNRFASKVDVYGKRYDTFVDEFSSILGRQA 224
>gi|15641841|ref|NP_231473.1| tolQ protein [Vibrio cholerae O1 biovar El Tor str. N16961]
gi|121727659|ref|ZP_01680762.1| tolQ protein [Vibrio cholerae V52]
gi|147674417|ref|YP_001217375.1| tolQ protein [Vibrio cholerae O395]
gi|153820329|ref|ZP_01972996.1| tolQ protein [Vibrio cholerae NCTC 8457]
gi|227081968|ref|YP_002810519.1| tolQ protein [Vibrio cholerae M66-2]
gi|254848925|ref|ZP_05238275.1| tolQ protein [Vibrio cholerae MO10]
gi|255745399|ref|ZP_05419348.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholera CIRS
101]
gi|262169826|ref|ZP_06037517.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae RC27]
gi|298498122|ref|ZP_07007929.1| TolQ [Vibrio cholerae MAK 757]
gi|10441437|gb|AAG17039.1|AF187269_1 TolQ [Vibrio cholerae O395]
gi|9656366|gb|AAF94987.1| tolQ protein [Vibrio cholerae O1 biovar El Tor str. N16961]
gi|121630046|gb|EAX62453.1| tolQ protein [Vibrio cholerae V52]
gi|126509124|gb|EAZ71718.1| tolQ protein [Vibrio cholerae NCTC 8457]
gi|146316300|gb|ABQ20839.1| tolQ protein [Vibrio cholerae O395]
gi|227009856|gb|ACP06068.1| tolQ protein [Vibrio cholerae M66-2]
gi|227013738|gb|ACP09948.1| tolQ protein [Vibrio cholerae O395]
gi|254844630|gb|EET23044.1| tolQ protein [Vibrio cholerae MO10]
gi|255737229|gb|EET92625.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholera CIRS
101]
gi|262022060|gb|EEY40770.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae RC27]
gi|297542455|gb|EFH78505.1| TolQ [Vibrio cholerae MAK 757]
Length = 227
Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 108/218 (49%), Gaps = 3/218 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
DIS LF+Q VK ++ L S+ SW+ II++S R+ FE FWSG L
Sbjct: 4 DISFLDLFLQASFLVKMVMLTLLGMSVASWAAIIKRSKVISAAEREADTFEDRFWSGMDL 63
Query: 70 ETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + +K + G+ IF + +E+ + +P + + R M VA+ARE++
Sbjct: 64 GALYQDVKKRKDDIYGIEEIFYAGFTEFARLRKTNPGAPDFVMEGTGRAMRVAVAREVDS 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ L FL ++ S +G+ G V G+M F ++ + + PGI E+LI+ +GL
Sbjct: 124 LETSLPFLATVGSISPYIGLFGTVWGIMHAFIALGEVKQATLAMVAPGIAEALIATAIGL 183
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+IP+ +AYN+ K F+ EF IL RQ
Sbjct: 184 FAAIPAVMAYNRLSNKVSKLEHTYATFSEEFHTILHRQ 221
>gi|109899249|ref|YP_662504.1| MotA/TolQ/ExbB proton channel [Pseudoalteromonas atlantica T6c]
gi|109701530|gb|ABG41450.1| Cell division and transport-associated protein TolQ
[Pseudoalteromonas atlantica T6c]
Length = 236
Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/218 (32%), Positives = 117/218 (53%), Gaps = 2/218 (0%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
++SIF LF Q L V+ ++ LL S+ SW+ I Q+S + ++FE FWSG L
Sbjct: 4 ELSIFGLFWQASLLVQLVMLLLLAASVASWTFIFQRSQALSRAKNDMKKFEDKFWSGVDL 63
Query: 70 ETVCKSLKNHHNI-GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ + L ++ G+A++F + E+ + + I D R M V+++RE++E+
Sbjct: 64 NRLYQELAARESVQGMASLFCAGFKEFVRLRKSSSTPSEAIMDGTYRAMRVSLSREIDEL 123
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLC 187
+L FL ++ S +G+ G V G+M F ++ + + PGI E+LI+ +GL
Sbjct: 124 ESRLPFLATVGSISPYIGLFGTVWGIMNAFIALGEVQQATLAMVAPGIAEALIATAMGLF 183
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IPS IAYN+F +K F EFS+IL RQ+
Sbjct: 184 AAIPSVIAYNRFSHQVEKLENNYGNFMEEFSSILHRQS 221
>gi|153827559|ref|ZP_01980226.1| tolQ protein [Vibrio cholerae MZO-2]
gi|153828554|ref|ZP_01981221.1| tolQ protein [Vibrio cholerae 623-39]
gi|254292156|ref|ZP_04962927.1| tolQ protein [Vibrio cholerae AM-19226]
gi|297579358|ref|ZP_06941286.1| tolQ protein [Vibrio cholerae RC385]
gi|148875949|gb|EDL74084.1| tolQ protein [Vibrio cholerae 623-39]
gi|149738472|gb|EDM52868.1| tolQ protein [Vibrio cholerae MZO-2]
gi|150421919|gb|EDN13895.1| tolQ protein [Vibrio cholerae AM-19226]
gi|297536952|gb|EFH75785.1| tolQ protein [Vibrio cholerae RC385]
gi|327484393|gb|AEA78800.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae
LMA3894-4]
Length = 227
Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 108/218 (49%), Gaps = 3/218 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
DIS LF+Q VK ++ L S+ SW+ II++S R+ FE FWSG L
Sbjct: 4 DISFLDLFLQASFLVKMVMLTLLGMSVASWAAIIKRSKVISAAEREADTFEDRFWSGMDL 63
Query: 70 ETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + +K + G+ IF + +E+ + +P + + R M VA+ARE++
Sbjct: 64 GALYQDVKKRKDDIYGIEEIFYAGFTEFARLRKTNPGAPDFVMEGTGRAMRVAVAREVDS 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ L FL ++ S +G+ G V G+M F ++ + + PGI E+LI+ +GL
Sbjct: 124 LETSLPFLATVGSISPYIGLFGTVWGIMHAFIALGEVKQATLAMVAPGIAEALIATAIGL 183
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+IP+ +AYN+ K F+ EF IL RQ
Sbjct: 184 FAAIPAVMAYNRLSNKVSKLEHTYATFSEEFHTILHRQ 221
>gi|262404185|ref|ZP_06080740.1| MotA/TolQ/ExbB proton channel family protein [Vibrio sp. RC586]
gi|262349217|gb|EEY98355.1| MotA/TolQ/ExbB proton channel family protein [Vibrio sp. RC586]
Length = 227
Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 108/218 (49%), Gaps = 3/218 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
DIS LF+Q VK ++ L S+ SW+ II++S R+ FE FWSG L
Sbjct: 4 DISFLDLFLQASFLVKMVMLTLLGMSVASWAAIIKRSKVISAAEREADTFEDRFWSGIDL 63
Query: 70 ETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + +K + G+ IF + +E+ + +P + + R M VA+ARE++
Sbjct: 64 GALYQDVKKRKDDIYGIEEIFYAGFTEFARLRKTNPSAPDFVMEGTGRAMRVAVAREVDS 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ L FL ++ S +G+ G V G+M F ++ + + PGI E+LI+ +GL
Sbjct: 124 LETSLPFLATVGSISPYIGLFGTVWGIMHAFIALGEVKQATLAMVAPGIAEALIATAIGL 183
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+IP+ +AYN+ K F+ EF IL RQ
Sbjct: 184 FAAIPAVMAYNRLSNKVSKLEHNYATFSEEFHTILHRQ 221
>gi|254418272|ref|ZP_05031996.1| protein TolQ [Brevundimonas sp. BAL3]
gi|196184449|gb|EDX79425.1| protein TolQ [Brevundimonas sp. BAL3]
Length = 250
Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/213 (33%), Positives = 119/213 (55%), Gaps = 4/213 (1%)
Query: 16 LFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKS 75
LF+ VK ++ L S+ SW++II K+ F L RQ EFE+ SG+SLE V
Sbjct: 15 LFLTADWVVKTVMIGLAAASLWSWTIIIDKAFRFTALNRQADEFEKAVQSGRSLEDVATQ 74
Query: 76 LKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIG---IQDRIDRMMDVAIARELEEITEKL 132
L + + A+S+W+++ +GA + + RIDR ++ I+RE + I L
Sbjct: 75 AGPAPEHALPRMLVIALSDWREARQRGALNDHQGDLLMTRIDRALNSLISRESQRIENGL 134
Query: 133 SFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCVSIP 191
L +++A +G+ G V G+M F IA + N+ ++ P I E+L + +GL +IP
Sbjct: 135 GVLSVVATASPFIGLFGTVWGIMNAFGRIAAAGNTNLTTVAPAIAEALFATAIGLAAAIP 194
Query: 192 SSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+ IAYNKF D+ KFA +++ FA++ A ++R+
Sbjct: 195 AYIAYNKFSIDAGKFAGRLDAFADDLQAAVARR 227
>gi|319943005|ref|ZP_08017288.1| TolQ colicin import protein [Lautropia mirabilis ATCC 51599]
gi|319743547|gb|EFV95951.1| TolQ colicin import protein [Lautropia mirabilis ATCC 51599]
Length = 230
Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 116/226 (51%), Gaps = 9/226 (3%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+SI ++ L + ++ LL + S++SW++I +K +R FE+ FW G L
Sbjct: 5 DLSILSMISDASLLAQAVMALLLVISLVSWTIIFRKLFAIKAAQRATNRFEEKFWQGAEL 64
Query: 70 ETVCKSLKN-HHNIG-LAAIFMSAMSEWKKSCDKGARSPIGIQDR------IDRMMDVAI 121
+ + + + + G +A IF + M E++++ G G + R M A
Sbjct: 65 NALYQEVSHASKDPGPMARIFEAGMKEFRRARQNGITGNGGPESSNIVLAPASRAMRAAF 124
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLI 180
RE++ + L+FL S S +G+ G V G+M F+ +A + S+ PGI E+L+
Sbjct: 125 QREMDALESSLAFLASAGSVSPYIGLFGTVWGIMNAFRGLADVQQATLASVAPGIAEALV 184
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+ +GL +IP+ +AYN++ + ++ A + E F +EFS IL R
Sbjct: 185 ATAIGLFAAIPAVVAYNRYAYEIERLANRFETFIDEFSNILDRHAR 230
>gi|87199036|ref|YP_496293.1| MotA/TolQ/ExbB proton channel [Novosphingobium aromaticivorans DSM
12444]
gi|87134717|gb|ABD25459.1| Cell division and transport-associated protein TolQ
[Novosphingobium aromaticivorans DSM 12444]
Length = 233
Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 117/226 (51%), Gaps = 2/226 (0%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N A ++ LF+ V+ ++ L + SI +W++II S+ +++R +E+
Sbjct: 8 NGVSFAPTSLNPVQLFLDADYVVQAVMAGLVLASIWTWTIIIGFSLKMGSVQRGCDAYER 67
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
FW + ++ K K ++ + +A++EW++S A G + R+ +D A+
Sbjct: 68 EFWEARDIDQFHKDNKGK-DLPSVRVVAAALTEWRRSTSGSAIDRDGTRQRLTTALDGAV 126
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMM-GFFQSIAGYYSNNVVSIPGIIESLI 180
E + + +L+FL ++ S VG+ G V G+M FF A S+ V PGI E+L
Sbjct: 127 VAETDALASRLNFLATVGSVAPFVGLFGTVWGIMDSFFNIGAQQNSSLAVVAPGISEALF 186
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+ +GL +IP+ IAYN+F +F ++ FA+ F A LSR+ E
Sbjct: 187 ATAIGLFAAIPAVIAYNRFSHRVNRFETRLYRFADRFHASLSRELE 232
>gi|261211903|ref|ZP_05926190.1| MotA/TolQ/ExbB proton channel family protein [Vibrio sp. RC341]
gi|260839253|gb|EEX65885.1| MotA/TolQ/ExbB proton channel family protein [Vibrio sp. RC341]
Length = 227
Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 108/218 (49%), Gaps = 3/218 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
DIS LF+Q VK ++ L S+ SW+ II++S R+ FE FWSG L
Sbjct: 4 DISFLDLFLQASFLVKMVMLTLLGMSVASWAAIIKRSKIISAAEREADTFEDRFWSGIDL 63
Query: 70 ETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + +K + G+ IF + +E+ + +P + + R M VA+ARE++
Sbjct: 64 GALYQDVKKRKDDIYGIEEIFYAGFTEFARLRKTNPSAPDFVMEGTGRAMRVAVAREVDS 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ L FL ++ S +G+ G V G+M F ++ + + PGI E+LI+ +GL
Sbjct: 124 LETSLPFLATVGSISPYIGLFGTVWGIMHAFIALGEVKQATLAMVAPGIAEALIATAIGL 183
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+IP+ +AYN+ K F+ EF IL RQ
Sbjct: 184 FAAIPAVMAYNRLSNKVSKLEHNYATFSEEFHTILHRQ 221
>gi|70732086|ref|YP_261842.1| tolQ protein [Pseudomonas fluorescens Pf-5]
gi|68346385|gb|AAY93991.1| tolQ protein [Pseudomonas fluorescens Pf-5]
Length = 231
Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 114/216 (52%), Gaps = 3/216 (1%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLET 71
S+++L + V+ ++ L S+ SW +I Q+S RR FE+ FWSG L
Sbjct: 10 SMWSLVSNASVVVQLVMLTLVAASVTSWIMIFQRSNLLRAGRRALESFEERFWSGIDLSK 69
Query: 72 VCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+ + ++ + G+ IF + E+ + + P + + + R M VAI+RE E++
Sbjct: 70 LYRQAGSNPDPDSGVEQIFRAGFKEFSRLRQQPGVDPEAVMEGVARAMRVAISREEEKLE 129
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCV 188
+ L FL ++ S +G+ G V G+M F+ +A + ++ PGI E+LI+ +GL
Sbjct: 130 QSLPFLATVGSVSPYIGLFGTVWGIMNSFRGLAQAQQATLATVAPGIAEALIATAIGLFA 189
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+IP+ IAYN+F + + FA+EF AIL R+
Sbjct: 190 AIPAVIAYNRFAARGETLISRYYTFADEFQAILHRK 225
>gi|327481494|gb|AEA84804.1| TolQ protein [Pseudomonas stutzeri DSM 4166]
Length = 230
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 115/219 (52%), Gaps = 3/219 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+S+++L V+ ++ +L S+ SW +I Q+ +R FE+ FWSG L
Sbjct: 8 MSMWSLISNASFVVQLVMLILVGASVTSWILIFQRGNMLRAAKRSLDAFEERFWSGIDLS 67
Query: 71 TVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ + ++ + G+ IF + E+ + + P + D ++R M VAI+RE E++
Sbjct: 68 KLYRQAGSNPDPDSGVEQIFRAGFKEFSRLRQQQGVDPDAVMDGVNRAMRVAISREEEKL 127
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLC 187
+ L FL ++ S +G+ G V G+M F+ +A + ++ PGI E+LI+ +GL
Sbjct: 128 EQSLPFLATVGSTSPYIGLFGTVWGIMNSFRGLAQVQQATLATVAPGIAEALIATAIGLF 187
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ IAYN+F + + FA+EF AIL R+
Sbjct: 188 AAIPAVIAYNRFSARGEMLIGRYYTFADEFQAILHRKVH 226
>gi|269139921|ref|YP_003296622.1| Tol-Pal system [Edwardsiella tarda EIB202]
gi|267985582|gb|ACY85411.1| Tol-Pal system [Edwardsiella tarda EIB202]
gi|304559756|gb|ADM42420.1| MotA/TolQ/ExbB proton channel family protein [Edwardsiella tarda
FL6-60]
Length = 224
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 110/218 (50%), Gaps = 3/218 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
++I LF++ L VK I+ +L FSI SW++IIQ++ R FE FWSG L
Sbjct: 1 MNILDLFLKASLLVKLIMLVLICFSIASWAIIIQRTRILNAATRDAEAFEDKFWSGIELS 60
Query: 71 TVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ + + + G IF S E+ + + +P G+ + R M +++ RE+E +
Sbjct: 61 RLYQESQTRRDALSGSEQIFYSGFKEFARLHRMNSHAPEGVIEGASRAMRISLNREIEAM 120
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLC 187
+ FLG++ S +G+ G V G+M F + + + PGI E+LI+ +GL
Sbjct: 121 ENHIPFLGTVGSISPYIGLFGTVWGIMHAFIGLGAVKQATLQMVAPGIAEALIATAIGLF 180
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ +AYN+ K E F EF AIL RQ
Sbjct: 181 AAIPAVMAYNRLSLRVNKLEQNYENFMEEFIAILHRQA 218
>gi|77460626|ref|YP_350133.1| MotA/TolQ/ExbB proton channel [Pseudomonas fluorescens Pf0-1]
gi|77384629|gb|ABA76142.1| Cell division and transport-associated protein TolQ [Pseudomonas
fluorescens Pf0-1]
Length = 221
Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 114/215 (53%), Gaps = 3/215 (1%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
+++L + V+ ++ L S+ SW +I Q+S RR FE+ FWSG L +
Sbjct: 1 MWSLVSNASIVVQLVMLTLVAASVTSWIMIFQRSNLIRAGRRALESFEERFWSGIDLSKL 60
Query: 73 CKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
+ ++ + G+ IF + E+ + + P + + + R M VAI+RE E++ +
Sbjct: 61 YRQAGSNPDPDSGVEQIFRAGFKEFSRLRQQPGVDPEAVMEGVARAMRVAISREEEKLEQ 120
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCVS 189
L FL ++ S +G+ G V G+M F+ +A + ++ PGI E+LI+ +GL +
Sbjct: 121 SLPFLATVGSVSPYIGLFGTVWGIMNSFRGLASAQQATLATVAPGIAEALIATAIGLFAA 180
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
IP+ IAYN+F S+ + FA+EF AIL R+
Sbjct: 181 IPAVIAYNRFSARSETLLSRYYTFADEFQAILHRK 215
>gi|226945716|ref|YP_002800789.1| TolQ proton channel [Azotobacter vinelandii DJ]
gi|226720643|gb|ACO79814.1| TolQ proton channel [Azotobacter vinelandii DJ]
Length = 231
Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/193 (33%), Positives = 102/193 (52%), Gaps = 3/193 (1%)
Query: 35 SILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNI--GLAAIFMSAM 92
S+ SW +I Q+ RR FE+ FWSG L + + + + GL IF +
Sbjct: 33 SVTSWIMIFQRGNMLRAARRSLDSFEERFWSGIDLAKLYRQAGSEPDPDSGLERIFRAGF 92
Query: 93 SEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVL 152
E+ + C + P + D + R M VAI+RE E++ + L FL ++ S +G+ G V
Sbjct: 93 KEFSRLCQQSGVVPDAVMDGVARSMRVAISREEEKLEQSLPFLATVGSTSPYIGLFGTVW 152
Query: 153 GMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
G+M F+ +A + ++ PGI E+LI+ +GL +IP+ IAYN+F + +
Sbjct: 153 GIMNSFRGLAQVQQATLSTVAPGIAEALIATAIGLFAAIPAVIAYNRFSARGELLIARYY 212
Query: 212 GFANEFSAILSRQ 224
FA+EF AIL R+
Sbjct: 213 TFADEFQAILHRK 225
>gi|121595092|ref|YP_986988.1| MotA/TolQ/ExbB proton channel [Acidovorax sp. JS42]
gi|222111435|ref|YP_002553699.1| protein tolq [Acidovorax ebreus TPSY]
gi|120607172|gb|ABM42912.1| Cell division and transport-associated protein TolQ [Acidovorax sp.
JS42]
gi|221730879|gb|ACM33699.1| protein TolQ [Acidovorax ebreus TPSY]
Length = 233
Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/220 (35%), Positives = 114/220 (51%), Gaps = 7/220 (3%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+SI +L + V+ ++ LL S+ SW+ I +K ++ +FE+ FWSG SL
Sbjct: 5 DMSILSLVLNASWVVQLVMLLLLAVSVASWAAIFRKLFALKRVKALNEDFERDFWSGTSL 64
Query: 70 ETVCKSLKNHHNIGLAA----IFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
+ S HN A IF S M E++K ++ P + D R M + RE+
Sbjct: 65 NDLYASAT--HNAKSAGPMERIFASGMREYQKLRERRISDPGTLLDGARRAMRASFQREM 122
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILL 184
+ I LSFLGS++S VG+ G V G+M F AG + ++ PGI E+L++ +
Sbjct: 123 DVIESSLSFLGSVASVSPYVGLFGTVWGIMHAFTGFAGMEQVTLATVAPGIAEALVATAI 182
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
GL +IP+ IAYN+F D + A E F EFS IL R
Sbjct: 183 GLFAAIPAVIAYNRFARDIDRVATHQETFIEEFSNILQRN 222
>gi|91776694|ref|YP_546450.1| MotA/TolQ/ExbB proton channel [Methylobacillus flagellatus KT]
gi|91710681|gb|ABE50609.1| Cell division and transport-associated protein TolQ
[Methylobacillus flagellatus KT]
Length = 224
Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 115/218 (52%), Gaps = 3/218 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S +L + V+ ++ LL + S++SW I K + + + EFE++FW G L
Sbjct: 6 DMSFISLISGASVPVQIVMALLLLTSLISWWYIFIKFFSIRSADNEAEEFERVFWKGGDL 65
Query: 70 ETVCKSLKN--HHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ +S+ + GLA+IF + E+ + + + + + R M A RE++E
Sbjct: 66 NQLYESVTSGRRSTQGLASIFEAGFKEYARLKRQPSLDVGDVTEGARRAMRAAYNREMDE 125
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ L FL S+ S +G+ G V G+M F+ +A + + PGI E+L++ +GL
Sbjct: 126 LDSHLPFLASVGSVSPYIGLFGTVWGIMNAFRGLANMAQATLSHVAPGIAEALVATAIGL 185
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+IP+ IAYN+F + + A++ E F EF+ IL R+
Sbjct: 186 FAAIPAVIAYNRFTASADRLAVRYESFIEEFTNILQRK 223
>gi|290474102|ref|YP_003466978.1| inner membrane protein required for outer membrane integrity,
uptake of group A colicins and phage DNA [Xenorhabdus
bovienii SS-2004]
gi|289173411|emb|CBJ80188.1| inner membrane protein required for outer membrane integrity,
uptake of group A colicins and phage DNA [Xenorhabdus
bovienii SS-2004]
Length = 226
Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 112/217 (51%), Gaps = 3/217 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
++I LF++ G V+ I+ +L FSI+SW++IIQ++ R+ FE FWSG L
Sbjct: 1 MNILDLFLKAGFLVQLIMLILIGFSIVSWAIIIQRTRILNAATREAEAFEDKFWSGIELS 60
Query: 71 TVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ K ++ + G IF S E+ + + P + R M +++ RELE +
Sbjct: 61 RLYKESQSRRDSLNGTEQIFHSGFKEFARLHQVNSHVPEAVITGASRAMRISMNRELETV 120
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLC 187
+ FLG++ S +G+ G V G+M F ++ + + PGI E+LI+ +GL
Sbjct: 121 ENHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMVAPGIAEALIATAIGLF 180
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+IP+ +AYN+ + K + F EF AIL RQ
Sbjct: 181 AAIPAVMAYNRLSQRVNKLEQIYDNFMEEFLAILHRQ 217
>gi|78485240|ref|YP_391165.1| MotA/TolQ/ExbB proton channel [Thiomicrospira crunogena XCL-2]
gi|78363526|gb|ABB41491.1| TolQ protein [Thiomicrospira crunogena XCL-2]
Length = 229
Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 117/228 (51%), Gaps = 9/228 (3%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
MNN+ S+ L + V+ ++ +L + SI++W++ KS +R+ R+F+
Sbjct: 1 MNNH-------SLMELILDASPVVQAVMVILLLMSIMAWAITFAKSYQLRKAQREARDFD 53
Query: 61 QLFWSGQSLETVCKSL-KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDV 119
+LFWS L + + ++ N G A IF + E+ +G + + R M V
Sbjct: 54 ELFWSTPELTGLYNQVTRDEDNTGNAQIFEAGFKEFMSLKSQGVIDSADLINGTQRAMRV 113
Query: 120 AIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIES 178
A ++++E + + L ++ S+ +G+ G V G+M F S+ + + S+ PGI E+
Sbjct: 114 AFSKQIERLENQTPLLATVGSSAPYIGLFGTVWGVMHAFSSLGDIQNATLASVAPGISEA 173
Query: 179 LISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
LI+ +GL +IP+ IAYN+ ++ K Q E FA F I+ RQ+
Sbjct: 174 LIATAMGLFAAIPAVIAYNRLSVNTDKVIGQYENFAEGFLTIIQRQSH 221
>gi|85374733|ref|YP_458795.1| TolQ, tolQ protein [Erythrobacter litoralis HTCC2594]
gi|84787816|gb|ABC63998.1| TolQ, tolQ protein [Erythrobacter litoralis HTCC2594]
Length = 234
Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 113/223 (50%), Gaps = 2/223 (0%)
Query: 5 GLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFW 64
G A + LF+ + V+ ++ L + SI SW +I+ S+ R + FE+ W
Sbjct: 11 GEATGRLDPLQLFLDADIVVQAVMIGLILASIWSWMIIVSFSMRLSGARSRSARFEKDLW 70
Query: 65 SGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARE 124
+++ +N ++ A I AM+EWK+S KG + +RI M +A E
Sbjct: 71 QADDFDSIMGKYQNK-DVPSARIAGVAMTEWKRSTSKGLKDREAASNRIAAAMGGQVAEE 129
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMG-FFQSIAGYYSNNVVSIPGIIESLISIL 183
+ + +L+FL + S VG+ G V G+M FFQ S+ V PGI E+L +
Sbjct: 130 ADTLAARLNFLATTGSVAPFVGLFGTVWGIMNSFFQIGVQESSSLAVVAPGISEALFATA 189
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+GL +IP+ IAYN+F F +++ FA++F A LSR+ E
Sbjct: 190 IGLFAAIPAVIAYNRFSSKVNIFEARLQRFADKFHANLSRELE 232
>gi|239816090|ref|YP_002945000.1| protein TolQ [Variovorax paradoxus S110]
gi|239802667|gb|ACS19734.1| protein TolQ [Variovorax paradoxus S110]
Length = 240
Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/222 (33%), Positives = 115/222 (51%), Gaps = 3/222 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+SI L + V+ ++ LL I SI SW+ II+K +R +FE+ FWSG SL
Sbjct: 4 DLSIINLLLHASFVVQLVVLLLVIVSIASWAAIIRKYFALRRMRALNDDFEREFWSGTSL 63
Query: 70 -ETVCKSLKNHHNIG-LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
E + +N G + IF S M E++K ++ + D R M + REL+
Sbjct: 64 NELFASAAQNAKFAGPMERIFASGMREYQKLRERHVSDAPTLLDGARRAMRASFQRELDA 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ LSFL ++ S VG+ G V G+M F +A + ++ PGI E+L++ +GL
Sbjct: 124 AEQNLSFLATVGSVSPYVGLFGTVWGIMHAFTGLAALAQVTLATVAPGIAEALVATAIGL 183
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
+IP+ + YN+F + K A+ +E + EFS IL R N
Sbjct: 184 FAAIPAVVGYNRFAREIDKIAIALETYIEEFSNILQRNLSAN 225
>gi|59711565|ref|YP_204341.1| membrane spanning protein in TolA-TolQ-TolR complex [Vibrio
fischeri ES114]
gi|197334878|ref|YP_002155720.1| protein TolQ [Vibrio fischeri MJ11]
gi|59479666|gb|AAW85453.1| membrane spanning protein in TolA-TolQ-TolR complex [Vibrio
fischeri ES114]
gi|197316368|gb|ACH65815.1| protein TolQ [Vibrio fischeri MJ11]
Length = 228
Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 110/218 (50%), Gaps = 3/218 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
++SI LF+Q L VK ++ +L S++SW++I ++S R FE FWSG L
Sbjct: 4 ELSILDLFLQASLLVKIVMLILLSLSVISWAMIFKRSKVLSVARSDAERFEDKFWSGMDL 63
Query: 70 ETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ +K + G IF S +E+ + + S + D R M V ++RE++
Sbjct: 64 SQLFNEVKVRKDRISGTEKIFYSGFNEFARLSRVNSSSSEAVMDGTARAMRVTVSREVDN 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ L FL ++ S +G+ G V G+M F ++ + + PGI E+L++ +GL
Sbjct: 124 LETNLPFLATVGSITPYIGLFGTVWGIMHAFIALGAVKQATLAMVAPGIAEALVATAMGL 183
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+IP+ IAYN+ K F +EFS+IL RQ
Sbjct: 184 FAAIPAVIAYNRLSVKVGKLEHNYAAFMDEFSSILHRQ 221
>gi|326388394|ref|ZP_08209990.1| MotA/TolQ/ExbB proton channel [Novosphingobium nitrogenifigens DSM
19370]
gi|326207126|gb|EGD57947.1| MotA/TolQ/ExbB proton channel [Novosphingobium nitrogenifigens DSM
19370]
Length = 233
Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 115/212 (54%), Gaps = 2/212 (0%)
Query: 16 LFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKS 75
LF+ + V+ ++ L + S+ W++I+ V +R + R++E FWS + ++ KS
Sbjct: 22 LFLHADIVVQIVMGGLVLASVWVWTIIVGFMVRMTLVRSRCRKYEDGFWSARDIDAYQKS 81
Query: 76 LKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFL 135
++ +I A + +A++EW++S + G + R+ M+ A+ +E + ++ +L+FL
Sbjct: 82 HEDQ-DIPSARVVSAALAEWRRSTSGKSIDREGTRQRLSMAMESAVTQETDRLSNRLNFL 140
Query: 136 GSMSSAGLLVGILGAVLGMM-GFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSI 194
++ + VG+ G V G+M FF A S+ V PGI E+L + +GL +IPS +
Sbjct: 141 ATVGTVAPFVGLFGTVWGVMDSFFNIGAQQNSSLAVVAPGISEALFATAIGLFAAIPSVV 200
Query: 195 AYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
AYN+F F + FA+ F LSR+ E
Sbjct: 201 AYNRFSHRVNGFETGLFRFADRFHTTLSRELE 232
>gi|284007873|emb|CBA73790.1| biopolymer transport protein [Arsenophonus nasoniae]
Length = 224
Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 110/218 (50%), Gaps = 3/218 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
++I LF++ V+ I+ +L FSI SW++IIQ+S R+ FE FWSG L
Sbjct: 1 MNILDLFLKASFLVQLIMLILIGFSIASWAIIIQRSKILNAATRETEAFEDRFWSGIELS 60
Query: 71 TVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ K + + G IF S E+ + +P + + R M +++ RELE +
Sbjct: 61 RLYKECQARRDSLTGSEQIFYSGFKEFARLRQANLHTPEAVMNGASRAMRISMNRELESL 120
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLC 187
+ FLG++ S +G+ G V G+M F ++ + + PGI E+LI+ +GL
Sbjct: 121 EAHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGSVKQATLQMVAPGIAEALIATAIGLF 180
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ +AYN+ + K + F EF AIL RQ
Sbjct: 181 AAIPAVMAYNRLNQRVNKLEQSYDNFMEEFLAILHRQA 218
>gi|329893682|ref|ZP_08269816.1| MotA/TolQ/ExbB proton channel family protein [gamma proteobacterium
IMCC3088]
gi|328923609|gb|EGG30921.1| MotA/TolQ/ExbB proton channel family protein [gamma proteobacterium
IMCC3088]
Length = 236
Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 115/221 (52%), Gaps = 6/221 (2%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+S+ L ++ L V+ ++ +L + SI SW +I+++ + F + +FE FWSG L
Sbjct: 5 LSLLDLVLEASLTVQAVMAMLVLASITSWFMIVKRGLYFQRAKSAMLDFEDAFWSGSDLS 64
Query: 71 TVCKSLKNHHN-----IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
++ K +G+ ++F + E+ + + I + R M VA+ RE
Sbjct: 65 SLYKDGSERAANGELILGMESLFRAGFKEFSRLAQQPEMDADAILEGARRAMRVAMLREE 124
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILL 184
E + + LSFL S+ S +G+ G V G+M F+ +A + ++ PGI E+L++ +
Sbjct: 125 ERLEQNLSFLASVGSTSPYIGLFGTVWGIMHSFRGLASSSQATLATVAPGISEALVATAM 184
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
GL +IP+ +AYN++ F + + F +EFS +L RQ
Sbjct: 185 GLFAAIPAVLAYNRYTARVDVFVNRYDTFMDEFSGLLYRQA 225
>gi|317491194|ref|ZP_07949630.1| TolQ protein [Enterobacteriaceae bacterium 9_2_54FAA]
gi|316920741|gb|EFV42064.1| TolQ protein [Enterobacteriaceae bacterium 9_2_54FAA]
Length = 227
Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 111/218 (50%), Gaps = 3/218 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+++F LF++ L VK I+ +L FSI SW++IIQ++ R FE FWSG L
Sbjct: 3 DMNMFDLFLKASLLVKLIMLVLVCFSIASWAIIIQRTRILNAATRDAEAFEDKFWSGIEL 62
Query: 70 ETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + + + G IF S E+ + + + G+ + R M +++ RE+E
Sbjct: 63 SRLYQESQTRRDSLTGSEQIFHSGFKEFARLHRVNSHAADGVIEGATRAMRISLNREVEG 122
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ + FLG++ S +G+ G V G+M F + + + PGI E+LI+ +GL
Sbjct: 123 LETHIPFLGTVGSISPYIGLFGTVWGIMHAFIGLGAVKQATLQMVAPGIAEALIATAIGL 182
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+IP+ +AYN+ + K F EF AIL RQ
Sbjct: 183 FAAIPAVMAYNRLNQRVNKLEQNYTNFMEEFIAILHRQ 220
>gi|212712436|ref|ZP_03320564.1| hypothetical protein PROVALCAL_03530 [Providencia alcalifaciens DSM
30120]
gi|212684893|gb|EEB44421.1| hypothetical protein PROVALCAL_03530 [Providencia alcalifaciens DSM
30120]
Length = 227
Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 110/219 (50%), Gaps = 3/219 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D++I LF++ L V+ I+ +L FSI SW++IIQ++ R+ FE FWSG L
Sbjct: 3 DMNILDLFLKASLLVQIIMFVLIGFSIASWAIIIQRTKILNAATREAEAFEDKFWSGIEL 62
Query: 70 ETVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ K + + G IF S E+ + +P + R M +++ RELE
Sbjct: 63 SRLYKESQARRDALGGAEQIFYSGFKEFVRLHQANIHAPDAVVTGASRAMRISMNRELES 122
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ + FLG++ S +G+ G V G+M F ++ + + PGI E+LI+ +GL
Sbjct: 123 VESHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMVAPGIAEALIATAIGL 182
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ +AYN+ K + F EF AIL RQ
Sbjct: 183 FAAIPAVMAYNRLNLRVNKLEQSYDNFMEEFLAILHRQA 221
>gi|146329605|ref|YP_001210059.1| TolQ protein [Dichelobacter nodosus VCS1703A]
gi|146233075|gb|ABQ14053.1| TolQ protein [Dichelobacter nodosus VCS1703A]
Length = 227
Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 117/217 (53%), Gaps = 2/217 (0%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS-GQS 68
++S+ L + V+ I+ +LFI ++ + + + V+F + + ++F Q FW
Sbjct: 4 ELSVGHLIFNASVIVQAIMLILFIMLTITIKISVNRWVHFKRIEYKTKQFNQTFWDHATD 63
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
L+ + + KN + G+ IFM E+ S G +P I R ++ I +E
Sbjct: 64 LQMLYEYYKNRSSEGIERIFMKGFDEFIHSHASGITNPDVIVQNCRRAIEAEIMLIGDEH 123
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLC 187
+ LS L + +S+ +G+LG V G+M F ++ G +++ S+ PGI E+LI+ +GLC
Sbjct: 124 EKNLSVLATFASSAPYIGLLGTVYGIMTSFIALGGVQQSSIASVAPGIAEALIATAIGLC 183
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+IPS ++YN FI S++ M+ E F +FS +L RQ
Sbjct: 184 AAIPSVLSYNFFIAKSERLQMEYEAFIEKFSNLLHRQ 220
>gi|197284478|ref|YP_002150350.1| colicin uptake protein TolQ [Proteus mirabilis HI4320]
gi|227356656|ref|ZP_03841042.1| TonB family auxiliary protein TolQ [Proteus mirabilis ATCC 29906]
gi|194681965|emb|CAR41393.1| biopolymer transport protein [Proteus mirabilis HI4320]
gi|227163164|gb|EEI48095.1| TonB family auxiliary protein TolQ [Proteus mirabilis ATCC 29906]
Length = 228
Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/219 (32%), Positives = 113/219 (51%), Gaps = 3/219 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+++ LF++ GL VK I+ LL FSI SW++IIQ++ R+ +FE FWSG L
Sbjct: 3 DMNVIDLFLKAGLLVKLIMLLLIGFSIASWAIIIQRTKVLNAADREAADFEDKFWSGTDL 62
Query: 70 ETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ K + + G IF S E+ + +P + + R M V+ RELE
Sbjct: 63 ARLYKESQARRDELSGAEQIFHSGFKEFARLHQANVHAPDAVVNGASRAMRVSFNRELES 122
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ + FLG++ S +G+ G V G+M F ++ + + PGI E+LI+ +GL
Sbjct: 123 LETHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGSVKQATLQMVAPGIAEALIATAIGL 182
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ +AYN+F + K + F EF IL RQ
Sbjct: 183 FAAIPAVMAYNRFTQRVNKLEQSYDNFMEEFLTILHRQA 221
>gi|54294382|ref|YP_126797.1| hypothetical protein lpl1451 [Legionella pneumophila str. Lens]
gi|54297487|ref|YP_123856.1| hypothetical protein lpp1532 [Legionella pneumophila str. Paris]
gi|53751272|emb|CAH12683.1| hypothetical protein lpp1532 [Legionella pneumophila str. Paris]
gi|53754214|emb|CAH15691.1| hypothetical protein lpl1451 [Legionella pneumophila str. Lens]
Length = 224
Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 124/222 (55%), Gaps = 11/222 (4%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFRE-FEQLFWSGQSLE 70
++ FMQ GL VK ++ +L I SI+SW++I Q++ F R+Q E F + FW L
Sbjct: 6 NVLMYFMQAGLVVKSVMLILLIASIISWTLIFQRAW-FFNRRKQMTETFTRRFWDCGDLS 64
Query: 71 TVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ + ++ + G+AAIF + E+ + C K + I + I R+M ++ A+E E++
Sbjct: 65 KLYADVDSNSDERQGVAAIFHAGFKEFVR-CRKQGKVSI---EPIQRVMQISHAKEAEKL 120
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI--PGIIESLISILLGL 186
+ L F S+ S VG+ G V G+M FQ++ G+ +++ PGI E+L++ LGL
Sbjct: 121 EQHLPFFASVGSISPYVGLFGTVWGIMTSFQAL-GHAQQATIAMVAPGISEALVATALGL 179
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
+IP+ IAYN++ + + + F E +++ +QT G+
Sbjct: 180 FTAIPAVIAYNRYTTRANTLLNKYDLFQEELISLIEQQTSGS 221
>gi|226330932|ref|ZP_03806450.1| hypothetical protein PROPEN_04855 [Proteus penneri ATCC 35198]
gi|225201727|gb|EEG84081.1| hypothetical protein PROPEN_04855 [Proteus penneri ATCC 35198]
Length = 228
Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 73/219 (33%), Positives = 113/219 (51%), Gaps = 3/219 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+++ LF++ GL VK I+ LL FSI SW++IIQ++ R+ +FE FWSG L
Sbjct: 3 DMNVIDLFLKAGLLVKLIMLLLIGFSIASWAIIIQRTKVLNAADREAADFEDKFWSGTDL 62
Query: 70 ETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ K + + G IF S E+ + +P I + R M V+ RELE
Sbjct: 63 ARLYKDSQARRDELSGSEQIFHSGFKEFARLHQASVHAPDAIVNGASRAMRVSFNRELES 122
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ + FLG++ S +G+ G V G+M F ++ + + PGI E+LI+ +GL
Sbjct: 123 LETHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGSVKQATLQMVAPGIAEALIATAIGL 182
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ +AYN+F + K + F EF IL RQ
Sbjct: 183 FAAIPAVMAYNRFTQRVNKLEQSYDNFMEEFLTILHRQA 221
>gi|258621412|ref|ZP_05716446.1| tolQ protein [Vibrio mimicus VM573]
gi|258626841|ref|ZP_05721648.1| tolQ protein [Vibrio mimicus VM603]
gi|262171196|ref|ZP_06038874.1| MotA/TolQ/ExbB proton channel family protein [Vibrio mimicus
MB-451]
gi|258580888|gb|EEW05830.1| tolQ protein [Vibrio mimicus VM603]
gi|258586800|gb|EEW11515.1| tolQ protein [Vibrio mimicus VM573]
gi|261892272|gb|EEY38258.1| MotA/TolQ/ExbB proton channel family protein [Vibrio mimicus
MB-451]
Length = 227
Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 108/218 (49%), Gaps = 3/218 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
DIS LF+Q VK ++ L S+ SW+ II++S ++ FE FWSG L
Sbjct: 4 DISFLDLFLQASFLVKMVMLTLLGMSVASWAAIIKRSKVISAAEKEADTFEDRFWSGIDL 63
Query: 70 ETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + +K + G+ IF + +E+ + +P + + R M VA+ARE++
Sbjct: 64 GALYQDVKKRKDDIYGIEEIFYAGFTEFARLRKTNPSAPDFVMEGTGRAMRVAVAREVDS 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ L FL ++ S +G+ G V G+M F ++ + + PGI E+LI+ +GL
Sbjct: 124 LETSLPFLATVGSISPYIGLFGTVWGIMHAFIALGEVKQATLAMVAPGIAEALIATAIGL 183
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+IP+ +AYN+ K F+ EF IL RQ
Sbjct: 184 FAAIPAVMAYNRLSNKVSKLEHNYATFSEEFHTILHRQ 221
>gi|148359110|ref|YP_001250317.1| biopolymer transport protein TolQ [Legionella pneumophila str.
Corby]
gi|296107158|ref|YP_003618858.1| biopolymer transport protein TolQ [Legionella pneumophila 2300/99
Alcoy]
gi|148280883|gb|ABQ54971.1| biopolymer transport protein TolQ [Legionella pneumophila str.
Corby]
gi|295649059|gb|ADG24906.1| biopolymer transport protein TolQ [Legionella pneumophila 2300/99
Alcoy]
gi|307610272|emb|CBW99836.1| hypothetical protein LPW_15971 [Legionella pneumophila 130b]
Length = 225
Score = 112 bits (280), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 124/222 (55%), Gaps = 11/222 (4%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFRE-FEQLFWSGQSLE 70
++ FMQ GL VK ++ +L I SI+SW++I Q++ F R+Q E F + FW L
Sbjct: 7 NVLMYFMQAGLVVKSVMLILLIASIISWTLIFQRAW-FFNRRKQMTETFTRRFWDCGDLS 65
Query: 71 TVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ + ++ + G+AAIF + E+ + C K + I + I R+M ++ A+E E++
Sbjct: 66 KLYADVDSNSDERQGVAAIFHAGFKEFVR-CRKQGKVSI---EPIQRVMQISHAKEAEKL 121
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI--PGIIESLISILLGL 186
+ L F S+ S VG+ G V G+M FQ++ G+ +++ PGI E+L++ LGL
Sbjct: 122 EQHLPFFASVGSISPYVGLFGTVWGIMTSFQAL-GHAQQATIAMVAPGISEALVATALGL 180
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
+IP+ IAYN++ + + + F E +++ +QT G+
Sbjct: 181 FTAIPAVIAYNRYTTRANTLLNKYDLFQEELISLIEQQTSGS 222
>gi|332305761|ref|YP_004433612.1| protein TolQ [Glaciecola agarilytica 4H-3-7+YE-5]
gi|332173090|gb|AEE22344.1| protein TolQ [Glaciecola agarilytica 4H-3-7+YE-5]
Length = 236
Score = 112 bits (280), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 117/218 (53%), Gaps = 2/218 (0%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
++SIF LF Q L V+ ++ LL S+ SW+ I Q+S + ++FE FWSG L
Sbjct: 4 ELSIFGLFWQASLLVQLVMLLLLAASVASWTFIFQRSQALSRAKSDMKKFEDKFWSGVDL 63
Query: 70 ETVCKSLKNHHNI-GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ + L ++ G+A++F + E+ + + I D R M V+++RE++++
Sbjct: 64 NRLYQELAARESVGGMASLFCAGFKEFVRLRKSSSTPSEAIMDGTYRAMRVSLSREIDDL 123
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLC 187
+L FL ++ S +G+ G V G+M F ++ + + PGI E+LI+ +GL
Sbjct: 124 ESRLPFLATVGSISPYIGLFGTVWGIMNAFIALGEVQQATLAMVAPGIAEALIATAMGLF 183
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IPS IAYN+F +K F EFS+IL RQ+
Sbjct: 184 AAIPSVIAYNRFSHQVEKLENNYGNFMEEFSSILHRQS 221
>gi|114799599|ref|YP_758885.1| protein TolQ [Hyphomonas neptunium ATCC 15444]
gi|114739773|gb|ABI77898.1| protein TolQ [Hyphomonas neptunium ATCC 15444]
Length = 236
Score = 112 bits (280), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 117/221 (52%), Gaps = 11/221 (4%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D S+ +L M VK ++ LF+ S+ SW VI +K L++ R+FE+ FWSG++
Sbjct: 14 DFSLISLLMAADPVVKLVLLALFLASVWSWIVIGEKFFKLGGLKKSSRDFEEAFWSGRAG 73
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQ-----DRIDRMMDVAIARE 124
E + + + + +F+SA EW D G + P+ ++ R +R M A+ RE
Sbjct: 74 EIDMRPGQGGKDPA-SRVFISAAREW---ADAG-KGPVSVEATAIVSRAERSMRAAVDRE 128
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISIL 183
+ + LS L ++ SA +G+ G V G+M F +IA ++ ++ G I E+L +
Sbjct: 129 IGRASAGLSVLATIGSASPFIGLFGTVWGIMNAFLNIAEQQDTSLGTVAGPIAEALFATG 188
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
LGL +IP+ I YNKF D K Q++ F+ + LSR+
Sbjct: 189 LGLIAAIPAVIFYNKFTSDLTKLGDQLDTFSQDVLVRLSRR 229
>gi|329907985|ref|ZP_08274763.1| MotA/TolQ/ExbB proton channel family protein [Oxalobacteraceae
bacterium IMCC9480]
gi|327546839|gb|EGF31765.1| MotA/TolQ/ExbB proton channel family protein [Oxalobacteraceae
bacterium IMCC9480]
Length = 233
Score = 112 bits (280), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 73/228 (32%), Positives = 118/228 (51%), Gaps = 11/228 (4%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S +L + V+ ++ LL S++SW+ I +K+ + + Q EFE+ FW+G L
Sbjct: 6 DLSFISLIANASILVQLVLALLLTVSVMSWTYIFRKAFSIKNAQAQTEEFERAFWAGGDL 65
Query: 70 ETVCKSLKNHHNIGLAA------IFMSAMSEWKK-SCDKGARSPIGIQDRID---RMMDV 119
T+ + ++ A IF + MSE+ K R+P ID R M
Sbjct: 66 NTLYQDAASNRRRSEGATGAQERIFAAGMSEFNKGKASLSNRNPGDASQLIDGARRAMRA 125
Query: 120 AIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIES 178
A RE++ + LSFL S+ S VG+ G V G+M F+ +A + ++ PGI E+
Sbjct: 126 AYQREMDALESHLSFLASVGSVSPYVGLFGTVWGIMNAFRGLANVQQATLSAVAPGIAEA 185
Query: 179 LISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
L++ +GL +IP+ +AYN+F D + +++ E F EFS IL RQ
Sbjct: 186 LVATAIGLFAAIPAVVAYNRFSHDVDRLSIRFESFVEEFSNILQRQAR 233
>gi|119775224|ref|YP_927964.1| MotA/TolQ/ExbB proton channel [Shewanella amazonensis SB2B]
gi|119767724|gb|ABM00295.1| MotA/TolQ/ExbB proton channel [Shewanella amazonensis SB2B]
Length = 229
Score = 112 bits (280), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 76/219 (34%), Positives = 117/219 (53%), Gaps = 5/219 (2%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
DIS LF+Q L VK ++ +L S+LSW+VIIQ+ + + +FE FWSG L
Sbjct: 4 DISFLGLFLQASLLVKLVMLVLVGLSVLSWAVIIQRRNLIKAAKSRSAKFEDKFWSGVDL 63
Query: 70 ETVCKSL--KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + L + N GL A+F++ E+ + AR P + D R M V ++RELE+
Sbjct: 64 NRLYQELSARGDANAGLEAMFVTGFKEYSRLARLSARVPGAVMDGTYRAMRVTLSRELEK 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI--PGIIESLISILLG 185
+ L L ++ S +G+ G V G+M F ++ G N + I P I E+LI+ +G
Sbjct: 124 LETNLPLLATIGSTSPYIGLFGTVWGIMNAFIAL-GAVQNPTLGIVAPAIAEALIATAMG 182
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
L +IP+ I YN++ + +K F EFS+IL RQ
Sbjct: 183 LAAAIPAVIFYNRYSTEVEKLEGTYVNFMEEFSSILHRQ 221
>gi|291612987|ref|YP_003523144.1| protein TolQ [Sideroxydans lithotrophicus ES-1]
gi|291583099|gb|ADE10757.1| protein TolQ [Sideroxydans lithotrophicus ES-1]
Length = 225
Score = 112 bits (280), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 108/221 (48%), Gaps = 4/221 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
I D+S L L V+ ++ LL + S++SW I K + +Q REFE FW
Sbjct: 4 IQDLSFMHLVTNASLLVQLVMGLLLLVSLMSWWYIFLKMFAVRSAVKQAREFEDAFWGNP 63
Query: 68 SLETVCKSLKNHHNIGLAA---IFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARE 124
+L + + + + A IF + +E+ K + D R M RE
Sbjct: 64 NLNALYQQANSQARTDVGALERIFAAGFAEFVKLKKTHGVDGAAVMDGTRRAMRAKYQRE 123
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISIL 183
++ + LSFL ++ S VG+LG V G+M F+ ++ + + PGI E+L++
Sbjct: 124 MDHLESHLSFLATVGSVSPYVGLLGTVWGIMNAFRGLSNVGQATLAQVAPGIAEALVATA 183
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+GL +IP+ +AYN++ D + + + E F EFS +L RQ
Sbjct: 184 MGLFAAIPAVVAYNRYAHDITRLSSRFESFIEEFSNVLQRQ 224
>gi|52841804|ref|YP_095603.1| biopolymer transport protein TolQ [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|52628915|gb|AAU27656.1| biopolymer transport protein TolQ [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
Length = 229
Score = 112 bits (280), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 124/222 (55%), Gaps = 11/222 (4%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFRE-FEQLFWSGQSLE 70
++ FMQ GL VK ++ +L I SI+SW++I Q++ F R+Q E F + FW L
Sbjct: 11 NVLMYFMQAGLVVKSVMLILLIASIISWTLIFQRAW-FFNRRKQMTETFTRRFWDCGDLS 69
Query: 71 TVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ + ++ + G+AAIF + E+ + C K + I + I R+M ++ A+E E++
Sbjct: 70 KLYADVDSNSDERQGVAAIFHAGFKEFVR-CRKQGKVSI---EPIQRVMQISHAKEAEKL 125
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI--PGIIESLISILLGL 186
+ L F S+ S VG+ G V G+M FQ++ G+ +++ PGI E+L++ LGL
Sbjct: 126 EQHLPFFASVGSISPYVGLFGTVWGIMTSFQAL-GHAQQATIAMVAPGISEALVATALGL 184
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
+IP+ IAYN++ + + + F E +++ +QT G+
Sbjct: 185 FTAIPAVIAYNRYTTRANTLLNKYDLFQEELISLIEQQTSGS 226
>gi|300715886|ref|YP_003740689.1| TolQ colicin import protein [Erwinia billingiae Eb661]
gi|299061722|emb|CAX58838.1| TolQ colicin import protein [Erwinia billingiae Eb661]
Length = 225
Score = 112 bits (280), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 111/218 (50%), Gaps = 3/218 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
++I LF++ L VK I+ +L FSI SW++IIQ++ R FE FWSG L
Sbjct: 1 MNILDLFLKASLLVKLIMLILIGFSIASWAIIIQRTRILNAAGRDADAFEDKFWSGIELS 60
Query: 71 TVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ + + + G IF S E+ + +P + + R M +++ RE+E +
Sbjct: 61 RLYQESQARRDELGGSEQIFYSGFKEFARLHRANNHAPEAVVEGATRAMRISLNREMEAL 120
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLC 187
+ FLG++ S +G+ G V G+M F ++ + + PGI E+LI+ +GL
Sbjct: 121 ENHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMVAPGIAEALIATAIGLF 180
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ +AYN+ + K + F EF+AIL RQ
Sbjct: 181 AAIPAVMAYNRLNQRVNKLEQNYDNFMEEFTAILHRQA 218
>gi|88705608|ref|ZP_01103318.1| MotA/TolQ/ExbB proton channel [Congregibacter litoralis KT71]
gi|88700121|gb|EAQ97230.1| MotA/TolQ/ExbB proton channel [Congregibacter litoralis KT71]
Length = 230
Score = 112 bits (279), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 109/216 (50%), Gaps = 6/216 (2%)
Query: 16 LFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKS 75
L M G+ VK ++ LL S+ SW +I Q+ F + + +FE+ FWSG L + +
Sbjct: 3 LVMDAGVTVKLVMALLMAASVTSWYMIFQRFFYFRSAGEEMLDFEEHFWSGVDLAQLYRE 62
Query: 76 LKNHHN-----IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
IG+ +F + E+ + + + + R M VA+ RE E + +
Sbjct: 63 GNERAADGEIIIGVEGVFRAGFKEFSRLAQQSDMDAEAMLEGARRAMRVAMLREEERLEK 122
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCVS 189
L FL ++ S VG+ G V G+M F+ +A + ++ PGI E+L++ +GL +
Sbjct: 123 HLPFLATVGSTSPYVGLFGTVWGIMNSFRGLANTSQATLATVAPGISEALVATAMGLFAA 182
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
IP+ +AYN+F + + + F +EFS+IL RQ
Sbjct: 183 IPAVMAYNRFASKVDVYGKRYDTFVDEFSSILGRQA 218
>gi|291616737|ref|YP_003519479.1| TolQ [Pantoea ananatis LMG 20103]
gi|291151767|gb|ADD76351.1| TolQ [Pantoea ananatis LMG 20103]
Length = 228
Score = 112 bits (279), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 112/221 (50%), Gaps = 3/221 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
+ D+++ LF++ L VK I+ +L FSI SW++IIQ++ R+ FE FWSG
Sbjct: 1 MTDMNVLDLFLKASLLVKLIMLILIGFSIASWAIIIQRTRILNAAGREADAFEDKFWSGV 60
Query: 68 SLETVCKS--LKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
L + + + G IF + E+ + +P + R M +++ REL
Sbjct: 61 ELSRLYQESQARREELAGSEQIFYAGFKEFARLHRVNNHAPEAAVEGASRAMRISMNREL 120
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILL 184
E + + FLG++ S +G+ G V G+M F ++ + + PGI E+LI+ +
Sbjct: 121 EALENHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMVAPGIAEALIATAI 180
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
GL +IP+ +AYN+ + K + F EF+AIL RQ
Sbjct: 181 GLFAAIPAVMAYNRLNQRVNKLEQGYDNFMEEFTAILHRQA 221
>gi|90412126|ref|ZP_01220132.1| Putative TolQ protein [Photobacterium profundum 3TCK]
gi|90326850|gb|EAS43235.1| Putative TolQ protein [Photobacterium profundum 3TCK]
Length = 228
Score = 112 bits (279), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 110/218 (50%), Gaps = 3/218 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
++SI LF+Q L VK ++ +L S+ SW++II++S + FE FWSG L
Sbjct: 4 ELSILDLFLQASLLVKIVMLILLGMSVASWAMIIKRSQILSNAASKAERFEDRFWSGVDL 63
Query: 70 ETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ K ++ + +G IF + E+ + + P + + R M V++ RE++E
Sbjct: 64 SQLYKEVEARKDDLMGSEQIFYTGFKEYARLHRSNGQVPDAVMEGTSRAMRVSLLREVDE 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ L FL ++ S +G+ G V G+M F ++ + + PGI E+L++ +GL
Sbjct: 124 LETSLPFLATVGSISPYIGLFGTVWGIMHAFIALGAVKQATLAMVAPGIAEALVATAMGL 183
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+IP+ + YNK K F EFS+IL RQ
Sbjct: 184 FAAIPAVMFYNKLTNQVSKLEHTYATFMEEFSSILHRQ 221
>gi|146283141|ref|YP_001173294.1| TolQ protein [Pseudomonas stutzeri A1501]
gi|145571346|gb|ABP80452.1| TolQ protein [Pseudomonas stutzeri A1501]
Length = 221
Score = 112 bits (279), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 113/217 (52%), Gaps = 3/217 (1%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
+++L V+ ++ +L S+ SW +I Q+ +R FE+ FWSG L +
Sbjct: 1 MWSLISNASFVVQLVMLILVGASVTSWILIFQRGNMLRAAKRSLDAFEERFWSGIDLSKL 60
Query: 73 CKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
+ ++ + G+ IF + E+ + + P + D ++R M VAI+RE E++ +
Sbjct: 61 YRQAGSNPDPDSGVEQIFRAGFKEFSRLRQQQGVDPDAVMDGVNRAMRVAISREEEKLEQ 120
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCVS 189
L FL ++ S +G+ G V G+M F+ +A + ++ PGI E+LI+ +GL +
Sbjct: 121 SLPFLATVGSTSPYIGLFGTVWGIMNSFRGLAQVQQATLATVAPGIAEALIATAIGLFAA 180
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
IP+ IAYN+F + + FA+EF AIL R+
Sbjct: 181 IPAVIAYNRFSARGEMLIGRYYTFADEFQAILHRKVH 217
>gi|259909073|ref|YP_002649429.1| colicin uptake protein TolQ [Erwinia pyrifoliae Ep1/96]
gi|224964695|emb|CAX56212.1| TolQ colicin import protein [Erwinia pyrifoliae Ep1/96]
gi|310767027|gb|ADP11977.1| Protein tolQ [Erwinia sp. Ejp617]
Length = 225
Score = 112 bits (279), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 111/218 (50%), Gaps = 3/218 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
++I LF++ L VK I+ +L FSI SW+VIIQ++ R FE FWSG L
Sbjct: 1 MNILDLFLKASLLVKLIMLILIGFSIASWAVIIQRTRILNAAVRDADAFEDKFWSGIELS 60
Query: 71 TVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ + ++ + G IF + E+ + +P + + R M +++ RELE +
Sbjct: 61 RLYQESQSRRDELGGSEQIFFAGFKEFARLHRANNHAPEAVVEGATRAMRISMNRELEAL 120
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLC 187
+ FLG++ S +G+ G V G+M F ++ + + PGI E+LI+ +GL
Sbjct: 121 ENHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMVAPGIAEALIATAIGLF 180
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ +AYN+ K + F EF+AIL RQ
Sbjct: 181 AAIPAVMAYNRLTLRVNKLEQNYDNFMEEFTAILHRQA 218
>gi|254229967|ref|ZP_04923369.1| protein TolQ [Vibrio sp. Ex25]
gi|151937536|gb|EDN56392.1| protein TolQ [Vibrio sp. Ex25]
Length = 221
Score = 112 bits (279), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 110/211 (52%), Gaps = 5/211 (2%)
Query: 18 MQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLK 77
+Q L VK ++ L SI+SW++II++S + +FE FWSG L + + +K
Sbjct: 1 LQASLLVKLVMLTLLGMSIVSWAMIIKRSKVLSQASKNAEQFEDKFWSGTDLSQLYQKVK 60
Query: 78 NHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFL 135
+ G IF + +E+ + A SP I + R M VA++RE++E+ L FL
Sbjct: 61 ARKDEIEGTEEIFYAGFTEFARLRKSNANSPAYIMEGTGRAMRVAVSREVDELETSLPFL 120
Query: 136 GSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI--PGIIESLISILLGLCVSIPSS 193
++ S +G+ G V G+M F ++ G +S+ PGI E+LI+ +GL +IP+
Sbjct: 121 ATVGSISPYIGLFGTVWGIMHAFIAL-GEVKQATLSMVAPGIAEALIATAMGLFAAIPAV 179
Query: 194 IAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+AYN+ K F+ EF +IL RQ
Sbjct: 180 MAYNRLSNKVSKLEHTYATFSEEFHSILHRQ 210
>gi|292487658|ref|YP_003530531.1| protein TolQ [Erwinia amylovora CFBP1430]
gi|291553078|emb|CBA20123.1| Protein tolQ [Erwinia amylovora CFBP1430]
gi|312171766|emb|CBX80024.1| Protein tolQ [Erwinia amylovora ATCC BAA-2158]
Length = 225
Score = 111 bits (278), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 111/218 (50%), Gaps = 3/218 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
++I LF++ L VK I+ +L FSI SW+VIIQ++ R FE FWSG L
Sbjct: 1 MNILDLFLKASLLVKLIMLILIGFSIASWAVIIQRTRILNAAVRDADAFEDKFWSGIELS 60
Query: 71 TVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ + ++ + G IF + E+ + +P + + R M +++ RELE +
Sbjct: 61 RLYQESQSRRDELGGSEQIFYAGFKEFARLHRANNHAPEAVVEGATRAMRISMNRELEAL 120
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLC 187
+ FLG++ S +G+ G V G+M F ++ + + PGI E+LI+ +GL
Sbjct: 121 ENHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMVAPGIAEALIATAIGLF 180
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ +AYN+ K + F EF+AIL RQ
Sbjct: 181 AAIPAVMAYNRLTLRVNKLEQNYDNFMEEFTAILHRQA 218
>gi|283784490|ref|YP_003364355.1| colicin import protein [Citrobacter rodentium ICC168]
gi|282947944|emb|CBG87508.1| colicin import protein [Citrobacter rodentium ICC168]
Length = 230
Score = 111 bits (278), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 115/218 (52%), Gaps = 3/218 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D++I LF++ L VK I+ +L FSI SW++IIQ++ R+ FE FWSG L
Sbjct: 3 DMNILDLFLKASLLVKLIMLILIGFSIASWAIIIQRTRILNAAAREAEAFEDKFWSGIEL 62
Query: 70 ETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + + + G IF S E+ + + +P I + R M +++ RELE
Sbjct: 63 SRLYQESQGRRDSLAGTEQIFYSGFKEFARLHRANSHAPEAIVEGASRAMRISMNRELEN 122
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ + FLG++ S +G+ G V G+M F ++ + + PGI E+LI+ +GL
Sbjct: 123 LETHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMVAPGIAEALIATAIGL 182
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+IP+ +AYN+ + K + + F EF+AIL RQ
Sbjct: 183 FAAIPAVMAYNRLNQRVNKLELNYDNFMEEFTAILHRQ 220
>gi|117618590|ref|YP_858097.1| protein TolQ [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
gi|117559997|gb|ABK36945.1| protein TolQ [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
Length = 229
Score = 111 bits (278), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 110/218 (50%), Gaps = 3/218 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
+IS LF Q L VK ++ L S++SW++IIQ+S +FE FWSG L
Sbjct: 4 EISFIGLFWQASLLVKLVMMTLMGMSVVSWALIIQRSKAIKAANLASEQFEDRFWSGVDL 63
Query: 70 ETVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + + + G+ IF S E+ + GAR + D R M V+++R ++E
Sbjct: 64 NRLYQESSSRRDDIEGMEDIFYSGFKEYARLLKAGARGQDAVMDGTYRAMRVSLSRAVDE 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ L L ++ S +G+ G V G+M F ++ + + PGI E+LI+ +GL
Sbjct: 124 LESNLPVLATIGSISPYIGLFGTVWGIMNAFIALGQVQQATLQMVAPGIAEALIATAMGL 183
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+IP+ I YN+F ++ F +EF+ IL+RQ
Sbjct: 184 FAAIPAVIFYNRFSNKVERLENAYANFMDEFTTILNRQ 221
>gi|85710727|ref|ZP_01041791.1| MotA/TolQ/ExbB proton channel family protein [Erythrobacter sp.
NAP1]
gi|85687905|gb|EAQ27910.1| MotA/TolQ/ExbB proton channel family protein [Erythrobacter sp.
NAP1]
Length = 240
Score = 111 bits (278), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 111/212 (52%), Gaps = 2/212 (0%)
Query: 16 LFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKS 75
LF++ + V+ ++ L + SI +W++I+ + L RE+E FW + E V
Sbjct: 28 LFLEADIVVQAVMIGLILASIWTWAIIVSFLLRIGKLNSASREYEAEFWDTRDREAVLTK 87
Query: 76 LKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFL 135
+ + A + + + EW++S GA + RI M+ +A E +++ KL+FL
Sbjct: 88 -QRRAKVPSARVAGAGLDEWRRSTKGGAPDRPAARQRIGAAMESQVAEEADDLAGKLNFL 146
Query: 136 GSMSSAGLLVGILGAVLGMMG-FFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSI 194
+ S VG+ G V G+M FFQ A ++ V PGI E+L + +GL +IP+ I
Sbjct: 147 ATTGSVAPFVGLFGTVWGIMNSFFQIGAQQSASLAVVAPGIAEALFATAIGLFAAIPAVI 206
Query: 195 AYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
AYN+F ++ +++ FA++ A LSR+ +
Sbjct: 207 AYNRFSNSVNQYEAKLQRFADKVHAGLSRELD 238
>gi|326795236|ref|YP_004313056.1| protein TolQ [Marinomonas mediterranea MMB-1]
gi|326546000|gb|ADZ91220.1| protein TolQ [Marinomonas mediterranea MMB-1]
Length = 226
Score = 111 bits (277), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 115/220 (52%), Gaps = 5/220 (2%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFR-EFEQLFWSGQSL 69
+SI+ L + V+ ++ L + S+ SW VI Q+ V + + R FE+ FWSG L
Sbjct: 1 MSIWGLIASASIVVQLVMLTLLLASLFSWIVIFQR-VRILKRAKVVRNRFEEQFWSGIDL 59
Query: 70 ETVCKSL--KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ K L G+ IF S + E+ + + P + + + R M VA+ +E E+
Sbjct: 60 SKLYKQLTADGRKVEGIENIFTSGIREFTRLRQGSSVEPDAVMEGVARSMRVALYKEEEK 119
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ + L FL ++ S +G+ G V G+M F +A + ++ PGI E+LI+ +GL
Sbjct: 120 LDQHLPFLATVGSISPYIGLFGTVWGIMHSFIGLAQVQQATIATVAPGIAEALIATAIGL 179
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ IAYN+F + A E F++EFS+IL R+
Sbjct: 180 AAAIPAVIAYNRFSAGADNLASSYENFSDEFSSILHRKVH 219
>gi|330828304|ref|YP_004391256.1| protein TolQ [Aeromonas veronii B565]
gi|328803440|gb|AEB48639.1| Protein TolQ [Aeromonas veronii B565]
Length = 229
Score = 111 bits (277), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 110/218 (50%), Gaps = 3/218 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
+IS LF Q L VK ++ L SI+SW++IIQ+S +FE FWSG L
Sbjct: 4 EISFIGLFWQASLLVKLVMMTLMSMSIVSWALIIQRSKAIKAANLASEQFEDRFWSGVDL 63
Query: 70 ETVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + + + G+ IF S E+ + GAR + D R M V+++R +++
Sbjct: 64 NRLYQESSSRRDDIEGMEDIFYSGFKEYARLLKAGARGQDAVMDGTYRAMRVSLSRAVDD 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ L L ++ S +G+ G V G+M F ++ + + PGI E+LI+ +GL
Sbjct: 124 LESNLPVLATIGSISPYIGLFGTVWGIMNAFIALGQVQQATLQMVAPGIAEALIATAMGL 183
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+IP+ I YN+F ++ F +EF+ IL+RQ
Sbjct: 184 FAAIPAVIFYNRFSNKVERLENAYANFMDEFTTILNRQ 221
>gi|91788751|ref|YP_549703.1| MotA/TolQ/ExbB proton channel [Polaromonas sp. JS666]
gi|91697976|gb|ABE44805.1| Cell division and transport-associated protein TolQ [Polaromonas
sp. JS666]
Length = 230
Score = 111 bits (277), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 71/218 (32%), Positives = 115/218 (52%), Gaps = 3/218 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+SI +L + V+ ++ LL SI SW+ I +K V +++ +F++ FWSG SL
Sbjct: 4 DLSIVSLILNASWVVQLVVALLVGVSIASWAAIFRKIVALKKVQKLNDDFDREFWSGTSL 63
Query: 70 ETVCKSLKNH--HNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + H+ + IF S M E++K ++ + D R M + REL+
Sbjct: 64 NDLFAGAAQNAKHSGAMERIFASGMREYQKLRERRIADTGTLLDGARRAMRASYQRELDA 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
I LSFL ++ S VG+ G V G+M F +A + ++ PGI E+L++ +GL
Sbjct: 124 IEVNLSFLATVGSVSPYVGLFGTVWGIMHAFTGLAALEQVTLATVAPGIAEALVATAIGL 183
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+IP+ +AYN+F D + A ++E F EFS IL R
Sbjct: 184 FAAIPAVVAYNRFAHDIDRVANRLETFIEEFSNILQRN 221
>gi|15596166|ref|NP_249660.1| TolQ protein [Pseudomonas aeruginosa PAO1]
gi|107100425|ref|ZP_01364343.1| hypothetical protein PaerPA_01001450 [Pseudomonas aeruginosa PACS2]
gi|116048894|ref|YP_792305.1| TolQ protein [Pseudomonas aeruginosa UCBPP-PA14]
gi|152986028|ref|YP_001349888.1| TolQ protein [Pseudomonas aeruginosa PA7]
gi|218893060|ref|YP_002441929.1| TolQ protein [Pseudomonas aeruginosa LESB58]
gi|254245252|ref|ZP_04938574.1| TolQ protein [Pseudomonas aeruginosa 2192]
gi|296390672|ref|ZP_06880147.1| TolQ protein [Pseudomonas aeruginosa PAb1]
gi|313105856|ref|ZP_07792119.1| TolQ protein [Pseudomonas aeruginosa 39016]
gi|1729993|sp|P50598|TOLQ_PSEAE RecName: Full=Protein tolQ
gi|9946876|gb|AAG04358.1|AE004530_11 TolQ protein [Pseudomonas aeruginosa PAO1]
gi|1103860|gb|AAC44658.1| TolQ [Pseudomonas aeruginosa]
gi|115584115|gb|ABJ10130.1| TolQ protein [Pseudomonas aeruginosa UCBPP-PA14]
gi|126198630|gb|EAZ62693.1| TolQ protein [Pseudomonas aeruginosa 2192]
gi|150961186|gb|ABR83211.1| protein TolQ [Pseudomonas aeruginosa PA7]
gi|218773288|emb|CAW29100.1| TolQ protein [Pseudomonas aeruginosa LESB58]
gi|310878621|gb|EFQ37215.1| TolQ protein [Pseudomonas aeruginosa 39016]
Length = 231
Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 113/216 (52%), Gaps = 3/216 (1%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLET 71
S+++L + V+ ++ L S+ SW +I Q+ ++ FE+ FWSG L
Sbjct: 10 SMWSLISNASIVVQLVMLTLVAASVTSWIMIFQRGNAMRAAKKALDAFEERFWSGIDLSK 69
Query: 72 VCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+ + ++ + G+ IF + E+ + + P + + + R M VAI+RE E++
Sbjct: 70 LYRQAGSNPDPDSGVEQIFRAGFKEFSRLRQQPGVDPDAVMEGVARAMRVAISREEEKLE 129
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCV 188
L FL ++ S VG+ G V G+M F+ +A + ++ PGI E+LI+ +GL
Sbjct: 130 ASLPFLATVGSTSPYVGLFGTVWGIMNSFRGLATVQQATLATVAPGIAEALIATAIGLFA 189
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+IP+ IAYN+F S+ + FA+EF AIL R+
Sbjct: 190 AIPAVIAYNRFSARSEMLIGRYYTFADEFQAILHRK 225
>gi|145297811|ref|YP_001140652.1| MotA/TolQ/ExbB proton channel [Aeromonas salmonicida subsp.
salmonicida A449]
gi|142850583|gb|ABO88904.1| MotA/TolQ/ExbB proton channel [Aeromonas salmonicida subsp.
salmonicida A449]
Length = 229
Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 109/218 (50%), Gaps = 3/218 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
+IS LF Q L VK ++ L S++SW++I Q+S +FE FWSG L
Sbjct: 4 EISFIGLFWQASLLVKLVMMTLMGMSVVSWALIFQRSKVIKAANLASEQFEDRFWSGVDL 63
Query: 70 ETVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + + + G+ IF S E+ + GAR + D R M V+++R ++E
Sbjct: 64 NRLYQESSSRRDDIEGMEDIFYSGFKEYARLLKAGARGQDAVMDGTYRAMRVSLSRAVDE 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ L L ++ S +G+ G V G+M F ++ + + PGI E+LI+ +GL
Sbjct: 124 LESNLPVLATVGSISPYIGLFGTVWGIMNAFIALGQVQQATLQMVAPGIAEALIATAMGL 183
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+IP+ I YN+F +K F +EF+ IL+RQ
Sbjct: 184 FAAIPAVIFYNRFTNKVEKLENAYANFMDEFTTILNRQ 221
>gi|49081978|gb|AAT50389.1| PA0969 [synthetic construct]
Length = 232
Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 113/216 (52%), Gaps = 3/216 (1%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLET 71
S+++L + V+ ++ L S+ SW +I Q+ ++ FE+ FWSG L
Sbjct: 10 SMWSLISNASIVVQLVMLTLVAASVTSWIMIFQRGNAMRAAKKALDAFEERFWSGIDLSK 69
Query: 72 VCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+ + ++ + G+ IF + E+ + + P + + + R M VAI+RE E++
Sbjct: 70 LYRQAGSNPDPDSGVEQIFRAGFKEFSRLRQQPGVDPDAVMEGVARAMRVAISREEEKLE 129
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCV 188
L FL ++ S VG+ G V G+M F+ +A + ++ PGI E+LI+ +GL
Sbjct: 130 ASLPFLATVGSTSPYVGLFGTVWGIMNSFRGLATVQQATLATVAPGIAEALIATAIGLFA 189
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+IP+ IAYN+F S+ + FA+EF AIL R+
Sbjct: 190 AIPAVIAYNRFSARSEMLIGRYYTFADEFQAILHRK 225
>gi|54309714|ref|YP_130734.1| putative TolQ protein [Photobacterium profundum SS9]
gi|46914152|emb|CAG20932.1| Putative TolQ protein [Photobacterium profundum SS9]
Length = 228
Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 110/218 (50%), Gaps = 3/218 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
++SI LF+Q L VK ++ +L S+ SW++II++S + FE FWSG L
Sbjct: 4 ELSILDLFLQASLLVKIVMLILLGMSVASWAMIIKRSQILSNAASKAGRFEDRFWSGVDL 63
Query: 70 ETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ K ++ + +G IF + E+ + + P + + R M V++ RE++E
Sbjct: 64 SQLYKEVEARKDDLMGSEQIFYTGFKEYARLHRSNGQVPDAVMEGTSRAMRVSLLREVDE 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ L FL ++ S +G+ G V G+M F ++ + + PGI E+L++ +GL
Sbjct: 124 LETSLPFLATVGSISPYIGLFGTVWGIMHAFIALGAVKQATLAMVAPGIAEALVATAMGL 183
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+IP+ + YNK K F EFS+IL RQ
Sbjct: 184 FAAIPAVMFYNKLTNQVSKLEHTYATFMEEFSSILHRQ 221
>gi|325923400|ref|ZP_08185065.1| Cell division and transport-associated protein TolQ (TC 2.C.1.2.1)
[Xanthomonas gardneri ATCC 19865]
gi|325546115|gb|EGD17304.1| Cell division and transport-associated protein TolQ (TC 2.C.1.2.1)
[Xanthomonas gardneri ATCC 19865]
Length = 259
Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 113/218 (51%), Gaps = 4/218 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
I+ L ++ + VK I+ LL I S +SW +I +K+ F R+ EFE FWSG L
Sbjct: 37 INYVELILRASIPVKIIVLLLLIGSFISWVIIFRKARAFKQANREADEFENRFWSGADLA 96
Query: 71 TVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ S + + GL ++F S E+ + D+ + R M A RE++++
Sbjct: 97 KLYASATDRNRTVGGLESMFESGFREFSRLRDRRRLDGRVQLEGAQRAMRTAFTREVDQL 156
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGL 186
L L ++ S VG++G V G+M + +G + PGI E+L + +GL
Sbjct: 157 ERNLELLANIGSTAPYVGLVGTVFGIMVTMHDMVSSGEQAGIAAVAPGISEALFATAIGL 216
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
V+IP+ AYN+F ++ +++ E FA+EFS+IL RQ
Sbjct: 217 FVAIPAVWAYNRFTTRVERLSVRYETFADEFSSILQRQ 254
>gi|88861317|ref|ZP_01135948.1| inner membrane protein [Pseudoalteromonas tunicata D2]
gi|88816696|gb|EAR26520.1| inner membrane protein [Pseudoalteromonas tunicata D2]
Length = 230
Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 110/218 (50%), Gaps = 3/218 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
++S L ++ V+ ++ +L S++SW++I Q+ + Q ++FE FWSG L
Sbjct: 4 ELSFIDLILKASFLVQLVMLMLVGLSVISWTMIFQRQKALHNAQIQAKKFEDKFWSGTDL 63
Query: 70 ETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ L GL ++F + E+ + + I D R M VA++RE+E+
Sbjct: 64 SKIYTELSARQQGLDGLESLFTAGFKEFARLSKSNLTAAGTIMDGTHRAMRVALSREMEK 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ LSFL ++ S +G+ G V G+M F ++ + + PGI E+LI+ +GL
Sbjct: 124 LESSLSFLATVGSISPYIGLFGTVWGIMNAFIALGQVKQATLQMVAPGIAEALIATAMGL 183
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+IP+ IAYN+F +K F EFS IL RQ
Sbjct: 184 FAAIPAVIAYNRFAHKVEKIESSYGNFMEEFSNILHRQ 221
>gi|307826392|ref|ZP_07656594.1| protein TolQ [Methylobacter tundripaludum SV96]
gi|307732569|gb|EFO03444.1| protein TolQ [Methylobacter tundripaludum SV96]
Length = 225
Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 112/219 (51%), Gaps = 5/219 (2%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+SIF L + V+ ++ +L S+ SW+ I K EFE+ FWSG L
Sbjct: 4 DLSIFHLVKEASFVVQFVMLILLSASVSSWTFIFSKRKELNRAIEITDEFEEQFWSGVVL 63
Query: 70 ETVCKSL--KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQ-DRIDRMMDVAIARELE 126
+ + L K+ G+ IF++ E+ + G P G+Q + R+M + ++RELE
Sbjct: 64 AELYRKLAAKDFEPEGIEKIFLAGYKEFSRMRQAGNVEP-GVQVESAQRVMRIELSRELE 122
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLG 185
+ E L+FL ++ S +G+ G V G+M F S+ + + PGI E+LI+ +G
Sbjct: 123 RLDEHLAFLATVGSISPYIGLFGTVWGIMNSFMSLGNVKQATLAQVAPGIAEALIATAIG 182
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
L +IP+ I+YN+F + + E F EF +L RQ
Sbjct: 183 LFAAIPAVISYNRFSTRLDRLTGRYELFVEEFVVLLQRQ 221
>gi|330721826|gb|EGG99800.1| MotA/TolQ/ExbB proton channel family protein [gamma proteobacterium
IMCC2047]
Length = 239
Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 107/189 (56%), Gaps = 3/189 (1%)
Query: 39 WSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSL--KNHHNIGLAAIFMSAMSEWK 96
W +I Q+S R+ +FE+ FWSG L + + + + N G+ IF + + E+
Sbjct: 33 WVMIFQRSRFLRHARKTLDKFEEQFWSGIDLSQLYVEINARINPNSGVENIFGAGLKEYT 92
Query: 97 KSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMG 156
+ + A I + + R+M VA+ARE E++ + LSFL ++ S VG+ G V G+M
Sbjct: 93 RLRSRIASDADAIINGVQRVMRVALAREEEKLEKHLSFLATVGSISPYVGLFGTVWGIMN 152
Query: 157 FFQSIAGYYSNNVVSI-PGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFAN 215
F+ +A + ++ PGI E+L++ +GL +IP+ IAYN++ ++ A + E FA
Sbjct: 153 SFRGLANVQQATLATVAPGISEALVATAMGLFAAIPAVIAYNRYSAEADNLAGRYETFAE 212
Query: 216 EFSAILSRQ 224
EFS+IL R+
Sbjct: 213 EFSSILHRK 221
>gi|21243871|ref|NP_643453.1| TolQ protein [Xanthomonas axonopodis pv. citri str. 306]
gi|294626859|ref|ZP_06705451.1| TolQ protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB
11122]
gi|294665408|ref|ZP_06730696.1| TolQ protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB
10535]
gi|21109472|gb|AAM37989.1| TolQ protein [Xanthomonas axonopodis pv. citri str. 306]
gi|292598873|gb|EFF43018.1| TolQ protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB
11122]
gi|292604819|gb|EFF48182.1| TolQ protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB
10535]
Length = 259
Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 113/218 (51%), Gaps = 4/218 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
I+ L ++ + VK I+ LL I S +SW +I +K+ F R+ EFE FWSG L
Sbjct: 37 INYVDLILRASIPVKIIVLLLLIGSFISWVIIFRKARAFKQANREADEFENRFWSGADLA 96
Query: 71 TVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ S + + GL ++F S E+ + D+ + R M A RE++++
Sbjct: 97 KLYASATDRNRTVGGLESMFESGFREFSRLRDRRRLDARVQLEGAQRAMRTAFTREVDQL 156
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGL 186
L L ++ S VG++G V G+M + +G + PGI E+L + +GL
Sbjct: 157 ERNLELLANIGSTAPYVGLVGTVFGIMVTMHDMVSSGEQAGIAAVAPGISEALFATAIGL 216
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
V+IP+ AYN+F ++ +++ E FA+EFS+IL RQ
Sbjct: 217 FVAIPAVWAYNRFTTRVERLSVRYETFADEFSSILQRQ 254
>gi|325917787|ref|ZP_08179971.1| Cell division and transport-associated protein TolQ (TC 2.C.1.2.1)
[Xanthomonas vesicatoria ATCC 35937]
gi|325536003|gb|EGD07815.1| Cell division and transport-associated protein TolQ (TC 2.C.1.2.1)
[Xanthomonas vesicatoria ATCC 35937]
Length = 259
Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 113/218 (51%), Gaps = 4/218 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
I+ L ++ + VK I+ LL I S +SW +I +K+ F R+ EFE FWSG L
Sbjct: 37 INYVDLILRASIPVKIIVLLLLIGSFISWVIIFRKARAFKQANREADEFENRFWSGADLA 96
Query: 71 TVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ S + + GL ++F S E+ + D+ + R M A RE++++
Sbjct: 97 KLYASATDRNRTVGGLESMFESGFREFSRLRDRRRLDARVQLEGAQRAMRTAFTREVDQL 156
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGL 186
L L ++ S VG++G V G+M + +G + PGI E+L + +GL
Sbjct: 157 ERNLELLANIGSTAPYVGLVGTVFGIMVTMHDMVSSGEQAGIAAVAPGISEALFATAIGL 216
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
V+IP+ AYN+F ++ +++ E FA+EFS+IL RQ
Sbjct: 217 FVAIPAVWAYNRFTTRVERLSVRYETFADEFSSILQRQ 254
>gi|237809445|ref|YP_002893885.1| protein TolQ [Tolumonas auensis DSM 9187]
gi|237501706|gb|ACQ94299.1| protein TolQ [Tolumonas auensis DSM 9187]
Length = 228
Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 117/218 (53%), Gaps = 3/218 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
++S L ++ V+ ++ +L SI SW++I+Q++ T R +FE+ FWSG L
Sbjct: 5 EMSFTNLILEASPLVQIVMLILLSMSIASWAIIVQRTKVLKTARSISEQFEERFWSGIDL 64
Query: 70 ETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + N + GL IF S E+ + + G ++ I D R M V+++REL+E
Sbjct: 65 NRLYQECANRRDELSGLEQIFYSGFKEFARLHNSGLKNQEMIMDGTYRAMRVSLSRELDE 124
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ L L ++ S +G+ G V G+M F +++ + ++ + P I E+LI+ +GL
Sbjct: 125 LETHLPVLATIGSISPYIGLFGTVWGIMHAFIALSAVKNASLAMVAPPIAEALIATAMGL 184
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+IP+ +AYN+F ++ F +EFS IL+RQ
Sbjct: 185 FAAIPAVVAYNRFSTKVERLDNSYINFMDEFSTILNRQ 222
>gi|289661904|ref|ZP_06483485.1| TolQ protein [Xanthomonas campestris pv. vasculorum NCPPB702]
gi|289666995|ref|ZP_06488070.1| TolQ protein [Xanthomonas campestris pv. musacearum NCPPB4381]
Length = 259
Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 113/218 (51%), Gaps = 4/218 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
I+ L ++ + VK I+ LL I S +SW +I +K+ F R+ EFE FWSG L
Sbjct: 37 INYVDLILRASIPVKIIVLLLLIGSFISWVIIFRKARAFKQANREADEFENRFWSGADLA 96
Query: 71 TVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ S + + GL ++F S E+ + D+ + R M A RE++++
Sbjct: 97 KLYASATDRNRTVGGLESMFESGFREFSRLRDRRRLDARVQLEGAQRAMRTAFTREVDQL 156
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGL 186
L L ++ S VG++G V G+M + +G + PGI E+L + +GL
Sbjct: 157 ERNLELLANIGSTAPYVGLVGTVFGIMVTMHDMVSSGEQAGIAAVAPGISEALFATAIGL 216
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
V+IP+ AYN+F ++ +++ E FA+EFS+IL RQ
Sbjct: 217 FVAIPAVWAYNRFTTRVERLSVRYETFADEFSSILQRQ 254
>gi|21232451|ref|NP_638368.1| TolQ protein [Xanthomonas campestris pv. campestris str. ATCC
33913]
gi|66767466|ref|YP_242228.1| TolQ protein [Xanthomonas campestris pv. campestris str. 8004]
gi|188990572|ref|YP_001902582.1| Biopolymer transport TolQ protein [Xanthomonas campestris pv.
campestris str. B100]
gi|21114233|gb|AAM42292.1| TolQ protein [Xanthomonas campestris pv. campestris str. ATCC
33913]
gi|66572798|gb|AAY48208.1| TolQ protein [Xanthomonas campestris pv. campestris str. 8004]
gi|167732332|emb|CAP50524.1| Biopolymer transport TolQ protein [Xanthomonas campestris pv.
campestris]
Length = 259
Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 111/213 (52%), Gaps = 4/213 (1%)
Query: 16 LFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKS 75
L ++ + VK I+ LL I S +SW +I +K+ F R+ EFE FWSG L + S
Sbjct: 42 LILRASIPVKIIVLLLLIGSFISWVIIFRKARAFKQANREADEFENRFWSGADLAKLYAS 101
Query: 76 LKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLS 133
+ + GL ++F S E+ + D+ + R M A RE++++ L
Sbjct: 102 ATDRNRTVGGLESMFESGFREFSRLRDRRRLDARVQLEGAQRAMRTAFTREVDQLERNLE 161
Query: 134 FLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGLCVSIP 191
L ++ S VG++G V G+M + +G + PGI E+L + +GL V+IP
Sbjct: 162 LLANIGSTAPYVGLVGTVFGIMVTMHDMVSSGEQAGIAAVAPGISEALFATAIGLFVAIP 221
Query: 192 SSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+ AYN+F ++ +++ E FA+EFS+IL RQ
Sbjct: 222 AVWAYNRFTTRVERLSVRYETFADEFSSILQRQ 254
>gi|255020127|ref|ZP_05292197.1| MotA/TolQ/ExbB proton channel family protein [Acidithiobacillus
caldus ATCC 51756]
gi|254970420|gb|EET27912.1| MotA/TolQ/ExbB proton channel family protein [Acidithiobacillus
caldus ATCC 51756]
Length = 233
Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 113/222 (50%), Gaps = 5/222 (2%)
Query: 7 AIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG 66
A +S+ L + V+ I+ LL I S+ SW VI QK++ F +R + FE+ FWSG
Sbjct: 9 AAESLSLTHLVLHASWVVQAILVLLLIASVASWYVIFQKALVFAHAQRALKRFEKRFWSG 68
Query: 67 QSLETVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARE 124
+ + + + + + G AIF + E+++ K AR + M I RE
Sbjct: 69 GEMAQIYQQVTGNAQLETGAGAIFCAGYEEFQRQ-RKQARGADALDAARRAMRGAQI-RE 126
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISIL 183
+ ++ L L S+SS VG+LG V G+M F +I + ++ P + E+LI+ L
Sbjct: 127 VGQLEGNLPLLASISSVAPFVGLLGTVWGIMTTFMNIGAAQQATLATVAPPVAEALIATL 186
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
GL +IP++ YN+F+ + E F +EF+ IL RQT
Sbjct: 187 AGLFAAIPATFFYNRFVHRLDELDSHYEVFMDEFTNILHRQT 228
>gi|319941768|ref|ZP_08016090.1| TolQ [Sutterella wadsworthensis 3_1_45B]
gi|319804701|gb|EFW01568.1| TolQ [Sutterella wadsworthensis 3_1_45B]
Length = 223
Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 114/226 (50%), Gaps = 17/226 (7%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFR---EFEQLFWSG 66
D+SI L L VK ++ +L + S+ SW+VI QK F +RR R +FE FWSG
Sbjct: 6 DLSILTLIANASLVVKAVLAILIVLSLASWTVIFQK---FFVVRRAMRQTDDFESRFWSG 62
Query: 67 QSLETVCKSLKNHHNI-GLAA-IFMSAMSEWKKSCDKGARSPIGIQDRID---RMMDVAI 121
L + + + G+ IF + M+E+ K R G D ++ R M
Sbjct: 63 TELTKLLDTANRSRDTSGMEERIFAAGMNEFMKQ-----RQTAGAADTVNSVSRAMRAVF 117
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLI 180
RE++ + L L S+ S +G+ G V G+M F ++ + ++ V PGI E+L+
Sbjct: 118 TREMDRLENGLPMLASIGSTSPYIGLFGTVWGIMNAFTGLSSLENASLAVVAPGIAEALV 177
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+ +GL +IP+ AYN + + + +++GF+ EF IL RQ+
Sbjct: 178 ATAIGLFAAIPAVAAYNYYNNRVGRLSNRVDGFSEEFLNILERQSR 223
>gi|302879784|ref|YP_003848348.1| protein TolQ [Gallionella capsiferriformans ES-2]
gi|302582573|gb|ADL56584.1| protein TolQ [Gallionella capsiferriformans ES-2]
Length = 225
Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 109/222 (49%), Gaps = 10/222 (4%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFR---EFEQLFWSG 66
D+S L + V+ ++ LL S++SW I K +RR+ R EFE+ FW
Sbjct: 6 DLSFIHLISNASVLVQLVMGLLLFVSMMSWWYIFMK---MFAIRREKRLTAEFEETFWRN 62
Query: 67 QSLETVCKSLKNHHNI---GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAR 123
+L V K++ N L IF + E+ K + + + R M R
Sbjct: 63 PNLNEVYKTVSNTSRSDQGALERIFAAGFVEFVKLKKQHGVDAAAVMEGTRRAMRATYQR 122
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISI 182
E++ + L+FL S+ S VG+ G V G+M F+ +A + + PGI E+L++
Sbjct: 123 EMDHLESHLAFLASVGSVSPYVGLFGTVWGIMNAFRGLANVGQATLAHVAPGIAEALVAT 182
Query: 183 LLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+GL +IP+ +AYN++ D ++ + + E F EFS +L RQ
Sbjct: 183 AMGLFAAIPAVVAYNRYAHDIERLSTRFESFTEEFSNVLQRQ 224
>gi|82776015|ref|YP_402362.1| colicin uptake protein TolQ [Shigella dysenteriae Sd197]
gi|81240163|gb|ABB60873.1| inner membrane protein [Shigella dysenteriae Sd197]
Length = 230
Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 115/218 (52%), Gaps = 3/218 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D++I LF++ L VK I+ +L FSI SW+VIIQ++ R+ FE FWSG L
Sbjct: 3 DMNILDLFLKASLLVKLIMLILIGFSIASWAVIIQRTRILNAAAREAEAFEDKFWSGIEL 62
Query: 70 ETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + + + G IF S E+ + + +P + + R M +++ RELE
Sbjct: 63 SRLYQESQGKRDNLTGSEQIFYSGFKEFVRLHRANSHAPEAVVEGASRAMRISMNRELEN 122
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ + FLG++ S +G+ G V G+M F ++ + + PGI E+LI+ +GL
Sbjct: 123 LETHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMVAPGIAEALIATAIGL 182
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+IP+ +AYN+ + K + + F EF+AIL RQ
Sbjct: 183 FAAIPAVMAYNRLNQRVNKLELNYDNFMEEFTAILHRQ 220
>gi|261343495|ref|ZP_05971140.1| protein TolQ [Providencia rustigianii DSM 4541]
gi|282568641|gb|EFB74176.1| protein TolQ [Providencia rustigianii DSM 4541]
Length = 227
Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 110/219 (50%), Gaps = 3/219 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D++I LF++ L V+ I+ +L FSI SW++IIQ++ R+ FE FWSG L
Sbjct: 3 DMNILDLFLKASLLVQIIMFVLLGFSIASWAIIIQRTKILNAATREAEAFEDKFWSGIEL 62
Query: 70 ETVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ K + + G IF S E+ + +P + R M +++ RELE
Sbjct: 63 SRLYKESQARRDALGGTEQIFYSGFKEFVRLHQANIHAPDAVITGAARAMRISMNRELES 122
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ + FLG++ S +G+ G V G+M F ++ + + PGI E+LI+ +GL
Sbjct: 123 VESHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMVAPGIAEALIATAIGL 182
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ +A+N+ K + F EF AIL RQ
Sbjct: 183 FAAIPAVMAFNRLNLRVNKLEQSYDNFMEEFLAILHRQA 221
>gi|254482599|ref|ZP_05095838.1| protein TolQ [marine gamma proteobacterium HTCC2148]
gi|214037290|gb|EEB77958.1| protein TolQ [marine gamma proteobacterium HTCC2148]
Length = 236
Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 114/222 (51%), Gaps = 6/222 (2%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
+S+ L + V+ ++ +L SILSW +I+Q+ + R + FE+ FWSG L
Sbjct: 4 QLSLIDLVINASFTVQMVMLILVGASILSWYMIVQRFLYLHNAREEMYGFEERFWSGIDL 63
Query: 70 ETVC-----KSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARE 124
+ K+ +G+ +IF + E+ + + I + R M VA+ RE
Sbjct: 64 SQLYREGNEKASDGQAILGMESIFRAGFKEFSRLAQQSEMDSEAILEGSRRAMRVAVMRE 123
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISIL 183
E + L+FL S+ S +G+ G V G+M F+ +A + ++ PGI E+L++
Sbjct: 124 EERLERHLAFLASVGSTSPYIGLFGTVWGIMHSFRGLANSTQATLATVAPGISEALVATA 183
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+GL +IP+ +AYN+F + F + + F +EFS+IL RQ
Sbjct: 184 MGLFAAIPAVLAYNRFSAKVEVFGNRYDTFVDEFSSILYRQA 225
>gi|294341041|emb|CAZ89436.1| Protein tolQ [Thiomonas sp. 3As]
Length = 250
Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/219 (34%), Positives = 115/219 (52%), Gaps = 3/219 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
+ SI ++ + + V+ ++ LL S+ SW+VI +K + R + +FEQ FWSG L
Sbjct: 4 NFSIVSMVLGASIVVQLVLALLLSVSLASWTVIFRKYFAIKSARVKSEDFEQEFWSGTGL 63
Query: 70 ETVCKS-LKN-HHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ +S L N H L IF S M E+ K ++ + D R M A RE++
Sbjct: 64 NDLYQSALSNGRHGSPLQRIFASGMREYLKLRERHVLDGSTLVDGARRAMRAAFQREMDA 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ LSFL S+ S VG+ G V G+M F ++ + ++ PGI E+L++ +GL
Sbjct: 124 LEANLSFLASVGSVSPYVGLFGTVWGIMHAFVGLSNLQQVTLATVAPGIAEALVATAIGL 183
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ IAYN F D + A + E F EFS IL RQ+
Sbjct: 184 FAAIPAVIAYNFFARDIDRLANRYESFTEEFSNILQRQS 222
>gi|268590339|ref|ZP_06124560.1| protein TolQ [Providencia rettgeri DSM 1131]
gi|291314248|gb|EFE54701.1| protein TolQ [Providencia rettgeri DSM 1131]
Length = 227
Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 110/219 (50%), Gaps = 3/219 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D++I LF++ L V+ I+ +L FSI SW++IIQ++ R+ FE FWSG L
Sbjct: 3 DMNILDLFLKASLLVQLIMFVLIGFSIASWAIIIQRTKILNAATREAEAFEDKFWSGIEL 62
Query: 70 ETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ K + + G IF S E+ + +P + R M +++ RELE
Sbjct: 63 SRLYKESQARRDELSGAEQIFHSGFKEFVRLHQANIHAPDAVVTGASRAMRISMNRELES 122
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ + FLG++ S +G+ G V G+M F ++ + + PGI E+LI+ +GL
Sbjct: 123 VEAHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMVAPGIAEALIATAIGL 182
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ +A+N+ K + F EF AIL RQ
Sbjct: 183 FAAIPAVMAFNRLNLRVSKLEQNYDNFMEEFLAILHRQA 221
>gi|78048831|ref|YP_365006.1| biopolymer transport TolQ protein [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|325929360|ref|ZP_08190490.1| Cell division and transport-associated protein TolQ (TC 2.C.1.2.1)
[Xanthomonas perforans 91-118]
gi|78037261|emb|CAJ25006.1| biopolymer transport TolQ protein [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|325540272|gb|EGD11884.1| Cell division and transport-associated protein TolQ (TC 2.C.1.2.1)
[Xanthomonas perforans 91-118]
Length = 259
Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 113/218 (51%), Gaps = 4/218 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
I+ L ++ + VK I+ LL I S +SW +I +K+ F R+ EFE FWSG L
Sbjct: 37 INYVDLILRASIPVKIIVLLLLIGSFISWVIIFRKARAFKLANREADEFENRFWSGADLA 96
Query: 71 TVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ S + + GL ++F S E+ + D+ + R M A RE++++
Sbjct: 97 KLYASATDRNRTVGGLESMFESGFREFSRLRDRRRLDARVQLEGAQRAMRTAFTREVDQL 156
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGL 186
L L ++ S VG++G V G+M + +G + PGI E+L + +GL
Sbjct: 157 ERNLELLANIGSTAPYVGLVGTVFGIMVTMHDMVSSGEQAGIAAVAPGISEALFATAIGL 216
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
V+IP+ AYN+F ++ +++ E FA+EFS+IL RQ
Sbjct: 217 FVAIPAVWAYNRFTTRVERLSVRYETFADEFSSILQRQ 254
>gi|296136872|ref|YP_003644114.1| protein TolQ [Thiomonas intermedia K12]
gi|295796994|gb|ADG31784.1| protein TolQ [Thiomonas intermedia K12]
Length = 250
Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/219 (34%), Positives = 115/219 (52%), Gaps = 3/219 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
+ SI ++ + + V+ ++ LL S+ SW+VI +K + R + +FEQ FWSG L
Sbjct: 4 NFSIVSMVLGASIVVQLVLALLLSVSLASWTVIFRKYFAIKSARVKSEDFEQEFWSGTGL 63
Query: 70 ETVCKS-LKN-HHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ +S L N H L IF S M E+ K ++ + D R M A RE++
Sbjct: 64 NDLYQSALSNGRHGSPLQRIFASGMREYLKLRERHVLDGSTLVDGARRAMRAAFQREMDA 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ LSFL S+ S VG+ G V G+M F ++ + ++ PGI E+L++ +GL
Sbjct: 124 LEANLSFLASVGSVSPYVGLFGTVWGIMHAFVGLSNLQQVTLATVAPGIAEALVATAIGL 183
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ IAYN F D + A + E F EFS IL RQ+
Sbjct: 184 FAAIPAVIAYNFFARDIDRLANRYESFTEEFSNILQRQS 222
>gi|15800453|ref|NP_286465.1| colicin uptake protein TolQ [Escherichia coli O157:H7 EDL933]
gi|15830026|ref|NP_308799.1| colicin uptake protein TolQ [Escherichia coli O157:H7 str. Sakai]
gi|16128712|ref|NP_415265.1| membrane spanning protein in TolA-TolQ-TolR complex [Escherichia
coli str. K-12 substr. MG1655]
gi|24111987|ref|NP_706497.1| colicin uptake protein TolQ [Shigella flexneri 2a str. 301]
gi|30062100|ref|NP_836271.1| colicin uptake protein TolQ [Shigella flexneri 2a str. 2457T]
gi|74311261|ref|YP_309680.1| colicin uptake protein TolQ [Shigella sonnei Ss046]
gi|82543164|ref|YP_407111.1| colicin uptake protein TolQ [Shigella boydii Sb227]
gi|89107595|ref|AP_001375.1| membrane spanning protein in TolA-TolQ-TolR complex [Escherichia
coli str. K-12 substr. W3110]
gi|157156530|ref|YP_001461898.1| colicin uptake protein TolQ [Escherichia coli E24377A]
gi|157160220|ref|YP_001457538.1| colicin uptake protein TolQ [Escherichia coli HS]
gi|168757202|ref|ZP_02782209.1| protein TolQ [Escherichia coli O157:H7 str. EC4401]
gi|168765423|ref|ZP_02790430.1| protein TolQ [Escherichia coli O157:H7 str. EC4501]
gi|168779232|ref|ZP_02804239.1| protein TolQ [Escherichia coli O157:H7 str. EC4076]
gi|168786903|ref|ZP_02811910.1| protein TolQ [Escherichia coli O157:H7 str. EC869]
gi|170080404|ref|YP_001729724.1| membrane spanning protein in TolA-TolQ-TolR complex [Escherichia
coli str. K-12 substr. DH10B]
gi|170681028|ref|YP_001742848.1| colicin uptake protein TolQ [Escherichia coli SMS-3-5]
gi|187733296|ref|YP_001879394.1| colicin uptake protein TolQ [Shigella boydii CDC 3083-94]
gi|188025332|ref|ZP_02777768.2| protein TolQ [Escherichia coli O157:H7 str. EC4113]
gi|188492595|ref|ZP_02999865.1| protein TolQ [Escherichia coli 53638]
gi|189402927|ref|ZP_02792196.2| protein TolQ [Escherichia coli O157:H7 str. EC4486]
gi|191169780|ref|ZP_03031423.1| protein TolQ [Escherichia coli B7A]
gi|194429041|ref|ZP_03061572.1| protein TolQ [Escherichia coli B171]
gi|194439232|ref|ZP_03071312.1| protein TolQ [Escherichia coli 101-1]
gi|195939089|ref|ZP_03084471.1| colicin uptake protein TolQ [Escherichia coli O157:H7 str. EC4024]
gi|208805902|ref|ZP_03248239.1| protein TolQ [Escherichia coli O157:H7 str. EC4206]
gi|208815454|ref|ZP_03256633.1| protein TolQ [Escherichia coli O157:H7 str. EC4045]
gi|208823284|ref|ZP_03263602.1| protein TolQ [Escherichia coli O157:H7 str. EC4042]
gi|209398857|ref|YP_002269371.1| protein TolQ [Escherichia coli O157:H7 str. EC4115]
gi|209917988|ref|YP_002292072.1| colicin uptake protein TolQ [Escherichia coli SE11]
gi|217326027|ref|ZP_03442111.1| protein TolQ [Escherichia coli O157:H7 str. TW14588]
gi|218553264|ref|YP_002386177.1| colicin uptake protein TolQ [Escherichia coli IAI1]
gi|218694161|ref|YP_002401828.1| colicin uptake protein TolQ [Escherichia coli 55989]
gi|218699109|ref|YP_002406738.1| colicin uptake protein TolQ [Escherichia coli IAI39]
gi|218704064|ref|YP_002411583.1| colicin uptake protein TolQ [Escherichia coli UMN026]
gi|238900002|ref|YP_002925798.1| membrane spanning protein in TolA-TolQ-TolR complex [Escherichia
coli BW2952]
gi|253774292|ref|YP_003037123.1| colicin uptake protein TolQ [Escherichia coli 'BL21-Gold(DE3)pLysS
AG']
gi|254160807|ref|YP_003043915.1| colicin uptake protein TolQ [Escherichia coli B str. REL606]
gi|254791894|ref|YP_003076731.1| colicin uptake protein TolQ [Escherichia coli O157:H7 str. TW14359]
gi|256023660|ref|ZP_05437525.1| colicin uptake protein TolQ [Escherichia sp. 4_1_40B]
gi|260842943|ref|YP_003220721.1| membrane spanning protein TolQ [Escherichia coli O103:H2 str.
12009]
gi|260853972|ref|YP_003227863.1| membrane spanning protein TolQ [Escherichia coli O26:H11 str.
11368]
gi|260866868|ref|YP_003233270.1| membrane spanning protein TolQ [Escherichia coli O111:H- str.
11128]
gi|261224448|ref|ZP_05938729.1| membrane spanning protein in TolA-TolQ-TolR complex [Escherichia
coli O157:H7 str. FRIK2000]
gi|261254561|ref|ZP_05947094.1| membrane spanning protein TolQ [Escherichia coli O157:H7 str.
FRIK966]
gi|291281680|ref|YP_003498498.1| Inner membrane protein [Escherichia coli O55:H7 str. CB9615]
gi|300816386|ref|ZP_07096608.1| protein TolQ [Escherichia coli MS 107-1]
gi|300822974|ref|ZP_07103109.1| protein TolQ [Escherichia coli MS 119-7]
gi|300900744|ref|ZP_07118893.1| protein TolQ [Escherichia coli MS 198-1]
gi|300906996|ref|ZP_07124665.1| protein TolQ [Escherichia coli MS 84-1]
gi|300918398|ref|ZP_07134998.1| protein TolQ [Escherichia coli MS 115-1]
gi|300926141|ref|ZP_07141954.1| protein TolQ [Escherichia coli MS 182-1]
gi|300929457|ref|ZP_07144925.1| protein TolQ [Escherichia coli MS 187-1]
gi|300937792|ref|ZP_07152588.1| protein TolQ [Escherichia coli MS 21-1]
gi|300947182|ref|ZP_07161392.1| protein TolQ [Escherichia coli MS 116-1]
gi|300957686|ref|ZP_07169875.1| protein TolQ [Escherichia coli MS 175-1]
gi|301020791|ref|ZP_07184855.1| protein TolQ [Escherichia coli MS 69-1]
gi|301027081|ref|ZP_07190453.1| protein TolQ [Escherichia coli MS 196-1]
gi|301305225|ref|ZP_07211323.1| protein TolQ [Escherichia coli MS 124-1]
gi|301327930|ref|ZP_07221101.1| protein TolQ [Escherichia coli MS 78-1]
gi|301648042|ref|ZP_07247809.1| protein TolQ [Escherichia coli MS 146-1]
gi|307137350|ref|ZP_07496706.1| colicin uptake protein TolQ [Escherichia coli H736]
gi|307314798|ref|ZP_07594392.1| protein TolQ [Escherichia coli W]
gi|309797452|ref|ZP_07691844.1| protein TolQ [Escherichia coli MS 145-7]
gi|331641238|ref|ZP_08342373.1| protein TolQ [Escherichia coli H736]
gi|331651745|ref|ZP_08352764.1| protein TolQ [Escherichia coli M718]
gi|331662097|ref|ZP_08363020.1| protein TolQ [Escherichia coli TA143]
gi|331667104|ref|ZP_08367969.1| protein TolQ [Escherichia coli TA271]
gi|331672259|ref|ZP_08373050.1| protein TolQ [Escherichia coli TA280]
gi|331676419|ref|ZP_08377116.1| protein TolQ [Escherichia coli H591]
gi|332282414|ref|ZP_08394827.1| membrane-spanning inner membrane protein [Shigella sp. D9]
gi|78103355|sp|P0ABV0|TOLQ_ECO57 RecName: Full=Protein tolQ
gi|78103356|sp|P0ABU9|TOLQ_ECOLI RecName: Full=Protein tolQ
gi|78103357|sp|P0ABV1|TOLQ_SHIFL RecName: Full=Protein tolQ
gi|12513670|gb|AAG55073.1|AE005252_9 inner membrane protein, membrane-spanning, maintains integrity of
cell envelope; tolerance to group A colicins
[Escherichia coli O157:H7 str. EDL933]
gi|1128978|gb|AAA83919.1| ORF 2; putative [Escherichia coli]
gi|1651329|dbj|BAA35403.1| membrane spanning protein in TolA-TolQ-TolR complex [Escherichia
coli str. K12 substr. W3110]
gi|1786958|gb|AAC73831.1| membrane spanning protein in TolA-TolQ-TolR complex [Escherichia
coli str. K-12 substr. MG1655]
gi|13360231|dbj|BAB34195.1| inner membrane protein TolQ [Escherichia coli O157:H7 str. Sakai]
gi|24050800|gb|AAN42204.1| inner membrane protein TolQ [Shigella flexneri 2a str. 301]
gi|30040344|gb|AAP16077.1| inner membrane protein TolQ [Shigella flexneri 2a str. 2457T]
gi|73854738|gb|AAZ87445.1| membrane-spanning inner membrane protein [Shigella sonnei Ss046]
gi|81244575|gb|ABB65283.1| TolQ [Shigella boydii Sb227]
gi|157065900|gb|ABV05155.1| protein TolQ [Escherichia coli HS]
gi|157078560|gb|ABV18268.1| protein TolQ [Escherichia coli E24377A]
gi|169888239|gb|ACB01946.1| membrane spanning protein in TolA-TolQ-TolR complex [Escherichia
coli str. K-12 substr. DH10B]
gi|170518746|gb|ACB16924.1| protein TolQ [Escherichia coli SMS-3-5]
gi|187430288|gb|ACD09562.1| protein TolQ [Shigella boydii CDC 3083-94]
gi|188013541|gb|EDU51663.1| protein TolQ [Escherichia coli O157:H7 str. EC4113]
gi|188487794|gb|EDU62897.1| protein TolQ [Escherichia coli 53638]
gi|189002913|gb|EDU71899.1| protein TolQ [Escherichia coli O157:H7 str. EC4076]
gi|189355762|gb|EDU74181.1| protein TolQ [Escherichia coli O157:H7 str. EC4401]
gi|189363406|gb|EDU81825.1| protein TolQ [Escherichia coli O157:H7 str. EC4486]
gi|189364863|gb|EDU83279.1| protein TolQ [Escherichia coli O157:H7 str. EC4501]
gi|189373046|gb|EDU91462.1| protein TolQ [Escherichia coli O157:H7 str. EC869]
gi|190900178|gb|EDV60084.1| protein TolQ [Escherichia coli B7A]
gi|194412872|gb|EDX29163.1| protein TolQ [Escherichia coli B171]
gi|194421817|gb|EDX37824.1| protein TolQ [Escherichia coli 101-1]
gi|208725703|gb|EDZ75304.1| protein TolQ [Escherichia coli O157:H7 str. EC4206]
gi|208732102|gb|EDZ80790.1| protein TolQ [Escherichia coli O157:H7 str. EC4045]
gi|208737477|gb|EDZ85161.1| protein TolQ [Escherichia coli O157:H7 str. EC4042]
gi|209160257|gb|ACI37690.1| protein TolQ [Escherichia coli O157:H7 str. EC4115]
gi|209776408|gb|ACI86516.1| inner membrane protein TolQ [Escherichia coli]
gi|209776410|gb|ACI86517.1| inner membrane protein TolQ [Escherichia coli]
gi|209776412|gb|ACI86518.1| inner membrane protein TolQ [Escherichia coli]
gi|209776414|gb|ACI86519.1| inner membrane protein TolQ [Escherichia coli]
gi|209776416|gb|ACI86520.1| inner membrane protein TolQ [Escherichia coli]
gi|209911247|dbj|BAG76321.1| TolQ protein [Escherichia coli SE11]
gi|217322248|gb|EEC30672.1| protein TolQ [Escherichia coli O157:H7 str. TW14588]
gi|218350893|emb|CAU96591.1| membrane spanning protein in TolA-TolQ-TolR complex [Escherichia
coli 55989]
gi|218360032|emb|CAQ97579.1| membrane spanning protein in TolA-TolQ-TolR complex [Escherichia
coli IAI1]
gi|218369095|emb|CAR16849.1| membrane spanning protein in TolA-TolQ-TolR complex [Escherichia
coli IAI39]
gi|218431161|emb|CAR12037.1| membrane spanning protein in TolA-TolQ-TolR complex [Escherichia
coli UMN026]
gi|238861744|gb|ACR63742.1| membrane spanning protein in TolA-TolQ-TolR complex [Escherichia
coli BW2952]
gi|242376499|emb|CAQ31203.1| tolQ, subunit of The Tol-Pal Cell Envelope Complex, Colicin S4
Transport System and The Colicin A Import System
[Escherichia coli BL21(DE3)]
gi|253325336|gb|ACT29938.1| protein TolQ [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
gi|253972708|gb|ACT38379.1| membrane spanning protein in TolA-TolQ-TolR complex [Escherichia
coli B str. REL606]
gi|253976902|gb|ACT42572.1| membrane spanning protein in TolA-TolQ-TolR complex [Escherichia
coli BL21(DE3)]
gi|254591294|gb|ACT70655.1| membrane spanning protein in TolA-TolQ-TolR complex [Escherichia
coli O157:H7 str. TW14359]
gi|257752621|dbj|BAI24123.1| membrane spanning protein TolQ [Escherichia coli O26:H11 str.
11368]
gi|257758090|dbj|BAI29587.1| membrane spanning protein TolQ [Escherichia coli O103:H2 str.
12009]
gi|257763224|dbj|BAI34719.1| membrane spanning protein TolQ [Escherichia coli O111:H- str.
11128]
gi|260450109|gb|ACX40531.1| protein TolQ [Escherichia coli DH1]
gi|281599947|gb|ADA72931.1| Inner membrane protein [Shigella flexneri 2002017]
gi|284920524|emb|CBG33586.1| colicin import protein [Escherichia coli 042]
gi|290761553|gb|ADD55514.1| Inner membrane protein [Escherichia coli O55:H7 str. CB9615]
gi|299879415|gb|EFI87626.1| protein TolQ [Escherichia coli MS 196-1]
gi|300315604|gb|EFJ65388.1| protein TolQ [Escherichia coli MS 175-1]
gi|300355803|gb|EFJ71673.1| protein TolQ [Escherichia coli MS 198-1]
gi|300398437|gb|EFJ81975.1| protein TolQ [Escherichia coli MS 69-1]
gi|300401217|gb|EFJ84755.1| protein TolQ [Escherichia coli MS 84-1]
gi|300414461|gb|EFJ97771.1| protein TolQ [Escherichia coli MS 115-1]
gi|300417840|gb|EFK01151.1| protein TolQ [Escherichia coli MS 182-1]
gi|300453168|gb|EFK16788.1| protein TolQ [Escherichia coli MS 116-1]
gi|300457157|gb|EFK20650.1| protein TolQ [Escherichia coli MS 21-1]
gi|300462566|gb|EFK26059.1| protein TolQ [Escherichia coli MS 187-1]
gi|300524515|gb|EFK45584.1| protein TolQ [Escherichia coli MS 119-7]
gi|300531076|gb|EFK52138.1| protein TolQ [Escherichia coli MS 107-1]
gi|300839537|gb|EFK67297.1| protein TolQ [Escherichia coli MS 124-1]
gi|300845573|gb|EFK73333.1| protein TolQ [Escherichia coli MS 78-1]
gi|301073868|gb|EFK88674.1| protein TolQ [Escherichia coli MS 146-1]
gi|306905696|gb|EFN36224.1| protein TolQ [Escherichia coli W]
gi|308118976|gb|EFO56238.1| protein TolQ [Escherichia coli MS 145-7]
gi|309700959|emb|CBJ00256.1| colicin import protein [Escherichia coli ETEC H10407]
gi|315059980|gb|ADT74307.1| membrane spanning protein in TolA-TolQ-TolR complex [Escherichia
coli W]
gi|315257656|gb|EFU37624.1| protein TolQ [Escherichia coli MS 85-1]
gi|320193142|gb|EFW67782.1| MotA/TolQ/ExbB proton channel family protein [Escherichia coli
O157:H7 str. EC1212]
gi|320637995|gb|EFX07764.1| colicin uptake protein TolQ [Escherichia coli O157:H7 str. G5101]
gi|320643390|gb|EFX12570.1| colicin uptake protein TolQ [Escherichia coli O157:H- str. 493-89]
gi|320648739|gb|EFX17372.1| colicin uptake protein TolQ [Escherichia coli O157:H- str. H 2687]
gi|320654323|gb|EFX22376.1| colicin uptake protein TolQ [Escherichia coli O55:H7 str. 3256-97
TW 07815]
gi|320659955|gb|EFX27497.1| colicin uptake protein TolQ [Escherichia coli O55:H7 str. USDA
5905]
gi|320664780|gb|EFX31918.1| colicin uptake protein TolQ [Escherichia coli O157:H7 str. LSU-61]
gi|323379460|gb|ADX51728.1| protein TolQ [Escherichia coli KO11]
gi|323942960|gb|EGB39124.1| TolQ protein [Escherichia coli E482]
gi|323963118|gb|EGB58688.1| TolQ protein [Escherichia coli H489]
gi|323967340|gb|EGB62761.1| TolQ protein [Escherichia coli M863]
gi|324020355|gb|EGB89574.1| protein TolQ [Escherichia coli MS 117-3]
gi|324116279|gb|EGC10200.1| TolQ protein [Escherichia coli E1167]
gi|326341514|gb|EGD65304.1| MotA/TolQ/ExbB proton channel family protein [Escherichia coli
O157:H7 str. 1044]
gi|331038036|gb|EGI10256.1| protein TolQ [Escherichia coli H736]
gi|331050023|gb|EGI22081.1| protein TolQ [Escherichia coli M718]
gi|331060519|gb|EGI32483.1| protein TolQ [Escherichia coli TA143]
gi|331065460|gb|EGI37353.1| protein TolQ [Escherichia coli TA271]
gi|331070454|gb|EGI41818.1| protein TolQ [Escherichia coli TA280]
gi|331075912|gb|EGI47209.1| protein TolQ [Escherichia coli H591]
gi|332096457|gb|EGJ01453.1| protein TolQ [Shigella dysenteriae 155-74]
gi|332104766|gb|EGJ08112.1| membrane-spanning inner membrane protein [Shigella sp. D9]
Length = 230
Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 115/218 (52%), Gaps = 3/218 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D++I LF++ L VK I+ +L FSI SW++IIQ++ R+ FE FWSG L
Sbjct: 3 DMNILDLFLKASLLVKLIMLILIGFSIASWAIIIQRTRILNAAAREAEAFEDKFWSGIEL 62
Query: 70 ETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + + + G IF S E+ + + +P + + R M +++ RELE
Sbjct: 63 SRLYQESQGKRDNLTGSEQIFYSGFKEFVRLHRANSHAPEAVVEGASRAMRISMNRELEN 122
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ + FLG++ S +G+ G V G+M F ++ + + PGI E+LI+ +GL
Sbjct: 123 LETHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMVAPGIAEALIATAIGL 182
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+IP+ +AYN+ + K + + F EF+AIL RQ
Sbjct: 183 FAAIPAVMAYNRLNQRVNKLELNYDNFMEEFTAILHRQ 220
>gi|120554622|ref|YP_958973.1| MotA/TolQ/ExbB proton channel [Marinobacter aquaeolei VT8]
gi|120324471|gb|ABM18786.1| Cell division and transport-associated protein TolQ [Marinobacter
aquaeolei VT8]
Length = 229
Score = 109 bits (273), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 116/218 (53%), Gaps = 4/218 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
++S++ L G+ V+ ++ LL + S++SW++I Q+ F R+ EFE FWSG L
Sbjct: 4 ELSVWHLIANAGILVQLVMLLLMLASVVSWALIFQRLQVFRKARQAQLEFEDRFWSGMDL 63
Query: 70 ETVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ K + G+ ++F + E+ + + +R + + R M VA +RE E
Sbjct: 64 GQLYKEVSAEPTPFSGMESVFRAGFKEFSR-LRQQSRDADAVMEGTQRAMRVAFSREQER 122
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ L FL ++ S VG+ G V G+M F+ +A + ++ PGI E+LI+ +GL
Sbjct: 123 LETHLPFLATVGSTSPYVGLFGTVWGIMNSFRGLAQVQQATLATVAPGISEALIATAMGL 182
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+IP+ IAYN+F S E FA EFS+IL R+
Sbjct: 183 FAAIPAVIAYNRFSAMSDALLKNYETFAEEFSSILHRR 220
>gi|148555051|ref|YP_001262633.1| Tol-Pal system, TolQ [Sphingomonas wittichii RW1]
gi|148500241|gb|ABQ68495.1| Tol-Pal system, TolQ [Sphingomonas wittichii RW1]
Length = 232
Score = 109 bits (273), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 114/220 (51%), Gaps = 7/220 (3%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+S ALF+Q + VK ++ L + S+ +W++I+ S+ R + FE FW + ++
Sbjct: 14 LSPIALFLQADIVVKAVMIGLLLASVWTWTIIVSGSMALTRAFRASKGFETDFWKSEDID 73
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPI---GIQDRIDRMMDVAIARELEE 127
+ +I A +F + ++EW++S G P+ G + R+ M A E++
Sbjct: 74 KFYEG-PGRQDIPAAKVFSAGVAEWRRSVRNG--QPVDRDGTRARLSNAMAAAAGAEIDR 130
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
++++L+ L ++ S VG+ G V G+M F IA + ++ V PGI E+L + LGL
Sbjct: 131 LSDRLNILATVGSVAPFVGLFGTVWGIMRSFTDIAASQNTSLGVVAPGIAEALFATALGL 190
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ IAYN+ + K Q+ F + LSR+ E
Sbjct: 191 FAAIPAVIAYNRLLHRVSKIEGQLHRFGDAIHMTLSRELE 230
>gi|327393163|dbj|BAK10585.1| protein TolQ [Pantoea ananatis AJ13355]
Length = 225
Score = 109 bits (272), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 110/218 (50%), Gaps = 3/218 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+++ LF++ L VK I+ +L FSI SW++IIQ++ R+ FE FWSG L
Sbjct: 1 MNVLDLFLKASLLVKLIMLILIGFSIASWAIIIQRTRILNAAGREADAFEDKFWSGVELS 60
Query: 71 TVCKS--LKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ + + G IF + E+ + +P + R M +++ RELE +
Sbjct: 61 RLYQESQARREELAGSEQIFYAGFKEFARLHRVNNHAPEAAVEGASRAMRISMNRELEAL 120
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLC 187
+ FLG++ S +G+ G V G+M F ++ + + PGI E+LI+ +GL
Sbjct: 121 ENHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMVAPGIAEALIATAIGLF 180
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ +AYN+ + K + F EF+AIL RQ
Sbjct: 181 AAIPAVMAYNRLNQRVNKLEQGYDNFMEEFTAILHRQA 218
>gi|218549690|ref|YP_002383481.1| colicin uptake protein TolQ [Escherichia fergusonii ATCC 35469]
gi|218357231|emb|CAQ89866.1| membrane spanning protein in TolA-TolQ-TolR complex [Escherichia
fergusonii ATCC 35469]
gi|324114856|gb|EGC08824.1| TolQ protein [Escherichia fergusonii B253]
Length = 230
Score = 109 bits (272), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 115/218 (52%), Gaps = 3/218 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D++I LF++ L VK I+ +L FSI SW++IIQ++ R+ FE FWSG L
Sbjct: 3 DMNILDLFLKASLLVKLIMLILIGFSIASWAIIIQRTRILNAAAREAEAFEDKFWSGIEL 62
Query: 70 ETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + + + G IF S E+ + + +P + + R M +++ RELE
Sbjct: 63 SRLYQESQGRRDNLSGSEQIFYSGFKEFVRLHRANSHAPEAVVEGASRAMRISMNRELEN 122
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ + FLG++ S +G+ G V G+M F ++ + + PGI E+LI+ +GL
Sbjct: 123 LETHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMVAPGIAEALIATAIGL 182
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+IP+ +AYN+ + K + + F EF+AIL RQ
Sbjct: 183 FAAIPAVMAYNRLNQRVNKLELNYDNFMEEFTAILHRQ 220
>gi|311280383|ref|YP_003942614.1| protein TolQ [Enterobacter cloacae SCF1]
gi|308749578|gb|ADO49330.1| protein TolQ [Enterobacter cloacae SCF1]
Length = 230
Score = 109 bits (272), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 114/218 (52%), Gaps = 3/218 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D++I LF++ L VK I+ +L FSI SW++IIQ++ R+ FE FWSG L
Sbjct: 3 DMNILDLFLKASLLVKLIMLILIGFSIASWAIIIQRTRILNAAAREAEAFEDKFWSGIEL 62
Query: 70 ETVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + + G IF S E+ + + +P I + R M +++ RELE
Sbjct: 63 SRLYQESQGRRESLNGSEQIFYSGFKEFARLHRANSHAPEAIVEGASRAMRISMNRELET 122
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ + FLG++ S +G+ G V G+M F ++ + + PGI E+LI+ +GL
Sbjct: 123 LETHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMVAPGIAEALIATAIGL 182
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+IP+ +AYN+ + K + + F EF+AIL RQ
Sbjct: 183 FAAIPAVMAYNRLNQRVNKLELNYDNFMEEFTAILHRQ 220
>gi|262276106|ref|ZP_06053915.1| MotA/TolQ/ExbB proton channel family protein [Grimontia hollisae
CIP 101886]
gi|262219914|gb|EEY71230.1| MotA/TolQ/ExbB proton channel family protein [Grimontia hollisae
CIP 101886]
Length = 228
Score = 109 bits (272), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 111/218 (50%), Gaps = 3/218 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
++SI LF+Q L VK ++ +L SI+SW++II++S + FE FWSG L
Sbjct: 4 ELSILDLFLQASLLVKAVMLVLLGMSIVSWTMIIKRSQVLSEAFTKAERFEDRFWSGVDL 63
Query: 70 ETVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + ++ + G IF S E+ + + P + + R M V++++E+E
Sbjct: 64 SQLFQEVQARKDKLSGSEQIFYSGFKEFARLHRSNGKVPEAVMEGTSRAMRVSLSKEVES 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ L FL ++ S +G+ G V G+M F ++ + + PGI E+L++ +GL
Sbjct: 124 LETNLPFLATVGSISPYIGLFGTVWGIMHAFIALGAVKQATLAMVAPGIAEALVATAMGL 183
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+IP+ +AYN+ K F EFS+IL RQ
Sbjct: 184 FAAIPAVMAYNRLTSKVGKLENNYINFMEEFSSILHRQ 221
>gi|94501017|ref|ZP_01307541.1| Biopolymer transport protein [Oceanobacter sp. RED65]
gi|94426764|gb|EAT11748.1| Biopolymer transport protein [Oceanobacter sp. RED65]
Length = 231
Score = 109 bits (272), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 106/216 (49%), Gaps = 3/216 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+SI++L V+ ++ +L +SW++IIQ+ ++ + +FE FWSG L
Sbjct: 5 MSIWSLIANASWVVQGVMLVLVAAVFISWTIIIQRHRLLTAVKDGYEDFEDRFWSGMDLS 64
Query: 71 TVCKSLKNHHN-IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+ K + G+ IF + E+ + +G P I R M VA +E E +
Sbjct: 65 QLYKEINQEPPAFGVENIFAAGFREFSRLRQQGG-DPEAIIQGTQRAMRVATTKEAELLE 123
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCV 188
L FL ++ S VG+ G V G+M F+ +A + V PGI E+LI+ +GL
Sbjct: 124 NHLPFLATVGSTSPYVGLFGTVWGIMNSFRGLANVQQATLAVVAPGIAEALIATAIGLFA 183
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+IP+ I YN+F + E FA EF +IL RQ
Sbjct: 184 AIPAVIFYNRFTTKVDQITSHYETFAEEFISILHRQ 219
>gi|319762693|ref|YP_004126630.1| protein tolq [Alicycliphilus denitrificans BC]
gi|330824834|ref|YP_004388137.1| protein TolQ [Alicycliphilus denitrificans K601]
gi|317117254|gb|ADU99742.1| protein TolQ [Alicycliphilus denitrificans BC]
gi|329310206|gb|AEB84621.1| protein TolQ [Alicycliphilus denitrificans K601]
Length = 233
Score = 108 bits (271), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 76/218 (34%), Positives = 116/218 (53%), Gaps = 3/218 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+SI +L + V+ ++ LL S+ SW+ I +K ++ +FE+ FWSG SL
Sbjct: 5 DMSILSLVLNASWVVQLVMLLLLAVSVASWAAIFRKLFALKRVKALNEDFERDFWSGTSL 64
Query: 70 -ETVCKSLKNHHNIG-LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
E + N + G + IF S M E++K ++ P + D R M + RE++
Sbjct: 65 NELFAAAAHNAKSAGPMERIFASGMREYQKLRERRITDPGTLLDGARRAMRASFQREMDV 124
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
I LSFLGS++S VG+ G V G+M F AG + ++ PGI E+L++ +GL
Sbjct: 125 IESSLSFLGSVASVSPYVGLFGTVWGIMHAFTGFAGMEQVTLATVAPGIAEALVATAIGL 184
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+IP+ IAYN+F D + A+ E F EFS IL R
Sbjct: 185 FAAIPAVIAYNRFARDIDRVAIHQETFIEEFSNILQRN 222
>gi|166712986|ref|ZP_02244193.1| TolQ [Xanthomonas oryzae pv. oryzicola BLS256]
Length = 259
Score = 108 bits (271), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 112/218 (51%), Gaps = 4/218 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
I+ L ++ + VK I+ LL I S +SW +I +K+ F R+ EFE FWSG L
Sbjct: 37 INYVDLILRASIPVKIIVLLLLIGSFISWVIIFRKARAFKQANREADEFENRFWSGADLA 96
Query: 71 TVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ S + + GL ++F E+ + D+ + R M A RE++++
Sbjct: 97 KLYASATDRNRTVGGLESMFEGGFREFSRLRDRRRLDARVQLEGAQRAMRTAFTREVDQL 156
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGL 186
L L ++ S VG++G V G+M + +G + PGI E+L + +GL
Sbjct: 157 ERNLELLANIGSTAPYVGLVGTVFGIMVTMHDMVSSGEQAGIAAVAPGISEALFATAIGL 216
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
V+IP+ AYN+F ++ +++ E FA+EFS+IL RQ
Sbjct: 217 FVAIPAVWAYNRFTTRVERLSVRYETFADEFSSILQRQ 254
>gi|300112855|ref|YP_003759430.1| protein TolQ [Nitrosococcus watsonii C-113]
gi|299538792|gb|ADJ27109.1| protein TolQ [Nitrosococcus watsonii C-113]
Length = 226
Score = 108 bits (271), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 102/196 (52%), Gaps = 14/196 (7%)
Query: 38 SWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNI---GLAAIFMSAMSE 94
+W++I +K R + EFE FWSG+ L + L + G+ IF++ E
Sbjct: 32 AWTLIFRKRGELKQAREEADEFEDRFWSGKELNNLYAELAAQQELPPGGMEGIFLAGFGE 91
Query: 95 WKKSCDKGARSPIGIQDRI-----DRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILG 149
+ + R +GI+ R R M V++ARE++ + L FL ++ S +G+ G
Sbjct: 92 FAR-----LRKQVGIEHRTVLEGTQRAMRVSLAREIDRLEASLPFLATVGSTSPYIGLFG 146
Query: 150 AVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAM 208
V G+M F+ + + + + PGI E+LI+ +GL +IP+ IAYN++ + ++ A
Sbjct: 147 TVWGIMNSFRGLGNAHQATLAMVAPGIAEALIATAMGLFAAIPAVIAYNRYAYEVERLAN 206
Query: 209 QMEGFANEFSAILSRQ 224
+ + F EFS IL RQ
Sbjct: 207 RYDTFIEEFSTILQRQ 222
>gi|16759684|ref|NP_455301.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Typhi str. CT18]
gi|16764115|ref|NP_459730.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|29142543|ref|NP_805885.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|56414138|ref|YP_151213.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|62179319|ref|YP_215736.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|161615021|ref|YP_001588986.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Paratyphi B str. SPB7]
gi|194446660|ref|YP_002039986.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
gi|194448001|ref|YP_002044779.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|194472247|ref|ZP_03078231.1| protein TolQ [Salmonella enterica subsp. enterica serovar Kentucky
str. CVM29188]
gi|194737848|ref|YP_002113853.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|195874283|ref|ZP_02701529.2| protein TolQ [Salmonella enterica subsp. enterica serovar Newport
str. SL317]
gi|197251691|ref|YP_002145706.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Agona str. SL483]
gi|197264867|ref|ZP_03164941.1| protein TolQ [Salmonella enterica subsp. enterica serovar Saintpaul
str. SARA23]
gi|197301124|ref|ZP_02663953.2| protein TolQ [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
gi|197363060|ref|YP_002142697.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|198242904|ref|YP_002214715.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|200389466|ref|ZP_03216077.1| protein TolQ [Salmonella enterica subsp. enterica serovar Virchow
str. SL491]
gi|204929841|ref|ZP_03220862.1| protein TolQ [Salmonella enterica subsp. enterica serovar Javiana
str. GA_MM04042433]
gi|205352009|ref|YP_002225810.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|205357295|ref|ZP_02346581.2| protein TolQ [Salmonella enterica subsp. enterica serovar Saintpaul
str. SARA29]
gi|205357903|ref|ZP_02574124.2| protein TolQ [Salmonella enterica subsp. enterica serovar
4,[5],12:i:- str. CVM23701]
gi|205358370|ref|ZP_02655688.2| protein TolQ [Salmonella enterica subsp. enterica serovar Kentucky
str. CDC 191]
gi|205358899|ref|ZP_02665535.2| protein TolQ [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL486]
gi|205359761|ref|ZP_02832120.2| protein TolQ [Salmonella enterica subsp. enterica serovar
Weltevreden str. HI_N05-537]
gi|205360773|ref|ZP_02686328.2| protein TolQ [Salmonella enterica subsp. enterica serovar Hadar
str. RI_05P066]
gi|207856189|ref|YP_002242840.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|25301390|pir||AE0592 TolQ protein [imported] - Salmonella enterica subsp. enterica
serovar Typhi (strain CT18)
gi|16419255|gb|AAL19689.1| tol protein, membrane-spanning inner membrane protein [Salmonella
enterica subsp. enterica serovar Typhimurium str. LT2]
gi|16501977|emb|CAD05207.1| TolQ protein [Salmonella enterica subsp. enterica serovar Typhi]
gi|29138174|gb|AAO69745.1| tolQ protein [Salmonella enterica subsp. enterica serovar Typhi
str. Ty2]
gi|56128395|gb|AAV77901.1| TolQ protein [Salmonella enterica subsp. enterica serovar Paratyphi
A str. ATCC 9150]
gi|62126952|gb|AAX64655.1| tol protein, membrane-spanning inner membrane proteins, required
for outer membrane integrity, uptake of group A
colicins, and translocation of phage DNA to cytoplasm
[Salmonella enterica subsp. enterica serovar
Choleraesuis str. SC-B67]
gi|161364385|gb|ABX68153.1| hypothetical protein SPAB_02781 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194405323|gb|ACF65545.1| protein TolQ [Salmonella enterica subsp. enterica serovar Newport
str. SL254]
gi|194406305|gb|ACF66524.1| protein TolQ [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL476]
gi|194458611|gb|EDX47450.1| protein TolQ [Salmonella enterica subsp. enterica serovar Kentucky
str. CVM29188]
gi|194713350|gb|ACF92571.1| protein TolQ [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|195629230|gb|EDX48598.1| protein TolQ [Salmonella enterica subsp. enterica serovar Newport
str. SL317]
gi|197094537|emb|CAR60057.1| TolQ protein [Salmonella enterica subsp. enterica serovar Paratyphi
A str. AKU_12601]
gi|197215394|gb|ACH52791.1| protein TolQ [Salmonella enterica subsp. enterica serovar Agona
str. SL483]
gi|197243122|gb|EDY25742.1| protein TolQ [Salmonella enterica subsp. enterica serovar Saintpaul
str. SARA23]
gi|197288339|gb|EDY27720.1| protein TolQ [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
gi|197937420|gb|ACH74753.1| protein TolQ [Salmonella enterica subsp. enterica serovar Dublin
str. CT_02021853]
gi|199601911|gb|EDZ00457.1| protein TolQ [Salmonella enterica subsp. enterica serovar Virchow
str. SL491]
gi|204320835|gb|EDZ06036.1| protein TolQ [Salmonella enterica subsp. enterica serovar Javiana
str. GA_MM04042433]
gi|205271790|emb|CAR36624.1| TolQ protein [Salmonella enterica subsp. enterica serovar
Gallinarum str. 287/91]
gi|205322565|gb|EDZ10404.1| protein TolQ [Salmonella enterica subsp. enterica serovar Saintpaul
str. SARA29]
gi|205328903|gb|EDZ15667.1| protein TolQ [Salmonella enterica subsp. enterica serovar
4,[5],12:i:- str. CVM23701]
gi|205334681|gb|EDZ21445.1| protein TolQ [Salmonella enterica subsp. enterica serovar Kentucky
str. CDC 191]
gi|205340129|gb|EDZ26893.1| protein TolQ [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL486]
gi|205343116|gb|EDZ29880.1| protein TolQ [Salmonella enterica subsp. enterica serovar
Weltevreden str. HI_N05-537]
gi|205347188|gb|EDZ33819.1| protein TolQ [Salmonella enterica subsp. enterica serovar Hadar
str. RI_05P066]
gi|206707992|emb|CAR32281.1| TolQ protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. P125109]
gi|261246008|emb|CBG23810.1| TolQ protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. D23580]
gi|267992486|gb|ACY87371.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Typhimurium str. 14028S]
gi|301157336|emb|CBW16825.1| TolQ protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. SL1344]
gi|322623637|gb|EFY20475.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-3]
gi|322670514|gb|EFY66647.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Montevideo str. 414877]
gi|322713790|gb|EFZ05361.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Choleraesuis str. A50]
gi|323129057|gb|ADX16487.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Typhimurium str. 4/74]
gi|323231002|gb|EGA15118.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Montevideo str. MB111609-0052]
gi|323260627|gb|EGA44236.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008284]
gi|323264698|gb|EGA48200.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008285]
gi|326627050|gb|EGE33393.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Gallinarum str. 9]
gi|332987682|gb|AEF06665.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Typhimurium str. UK-1]
Length = 230
Score = 108 bits (271), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 115/218 (52%), Gaps = 3/218 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D++I LF++ L VK I+ +L FSI SW++IIQ++ R+ FE FWSG L
Sbjct: 3 DMNILDLFLKASLLVKLIMLILIGFSIASWAIIIQRTRILNAAAREAEAFEDKFWSGIEL 62
Query: 70 ETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + + + G IF S E+ + + +P + + R M +++ RELE
Sbjct: 63 SRLYQESQGRRDSLSGSEQIFYSGFKEFVRLHRANSHAPEAVVEGASRAMRISMNRELET 122
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ + FLG++ S +G+ G V G+M F ++ + + PGI E+LI+ +GL
Sbjct: 123 LETHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMVAPGIAEALIATAIGL 182
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+IP+ +AYN+ + K + + F EF+AIL RQ
Sbjct: 183 FAAIPAVMAYNRLNQRVNKLELNYDNFMEEFTAILHRQ 220
>gi|161504093|ref|YP_001571205.1| colicin uptake protein TolQ [Salmonella enterica subsp. arizonae
serovar 62:z4,z23:-- str. RSK2980]
gi|160865440|gb|ABX22063.1| hypothetical protein SARI_02191 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 230
Score = 108 bits (271), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 115/218 (52%), Gaps = 3/218 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D++I LF++ L VK I+ +L FSI SW++IIQ++ R+ FE FWSG L
Sbjct: 3 DMNILDLFLKASLLVKLIMLILIGFSIASWAIIIQRTRILNAAAREAEAFEDKFWSGIEL 62
Query: 70 ETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + + + G IF S E+ + + +P + + R M +++ RELE
Sbjct: 63 SRLYQESQGRRDNLSGSEQIFYSGFKEFVRLHRANSHAPEAVVEGASRAMRISMNRELET 122
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ + FLG++ S +G+ G V G+M F ++ + + PGI E+LI+ +GL
Sbjct: 123 LETHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMVAPGIAEALIATAIGL 182
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+IP+ +AYN+ + K + + F EF+AIL RQ
Sbjct: 183 FAAIPAVMAYNRLNQRVNKLELNYDNFMEEFTAILHRQ 220
>gi|26246706|ref|NP_752746.1| colicin uptake protein TolQ [Escherichia coli CFT073]
gi|91209771|ref|YP_539757.1| colicin uptake protein TolQ [Escherichia coli UTI89]
gi|117622928|ref|YP_851841.1| colicin uptake protein TolQ [Escherichia coli APEC O1]
gi|191174066|ref|ZP_03035582.1| protein TolQ [Escherichia coli F11]
gi|215485759|ref|YP_002328190.1| colicin uptake protein TolQ [Escherichia coli O127:H6 str.
E2348/69]
gi|218557650|ref|YP_002390563.1| colicin uptake protein TolQ [Escherichia coli S88]
gi|218688528|ref|YP_002396740.1| colicin uptake protein TolQ [Escherichia coli ED1a]
gi|227884296|ref|ZP_04002101.1| colicin uptake protein TolQ [Escherichia coli 83972]
gi|237707300|ref|ZP_04537781.1| colicin uptake protein TolQ [Escherichia sp. 3_2_53FAA]
gi|300992348|ref|ZP_07179871.1| protein TolQ [Escherichia coli MS 200-1]
gi|300993163|ref|ZP_07180246.1| protein TolQ [Escherichia coli MS 45-1]
gi|301051343|ref|ZP_07198166.1| protein TolQ [Escherichia coli MS 185-1]
gi|306812856|ref|ZP_07447049.1| colicin uptake protein TolQ [Escherichia coli NC101]
gi|331645888|ref|ZP_08346991.1| protein TolQ [Escherichia coli M605]
gi|331656755|ref|ZP_08357717.1| protein TolQ [Escherichia coli TA206]
gi|331682167|ref|ZP_08382789.1| protein TolQ [Escherichia coli H299]
gi|26107105|gb|AAN79289.1|AE016757_193 TolQ protein [Escherichia coli CFT073]
gi|91071345|gb|ABE06226.1| TolQ protein [Escherichia coli UTI89]
gi|115512052|gb|ABJ00127.1| TolQ protein [Escherichia coli APEC O1]
gi|190905674|gb|EDV65297.1| protein TolQ [Escherichia coli F11]
gi|215263831|emb|CAS08169.1| membrane spanning protein TolQ in TolA-TolQ-TolR complex
[Escherichia coli O127:H6 str. E2348/69]
gi|218364419|emb|CAR02099.1| membrane spanning protein in TolA-TolQ-TolR complex [Escherichia
coli S88]
gi|218426092|emb|CAR06910.1| membrane spanning protein in TolA-TolQ-TolR complex [Escherichia
coli ED1a]
gi|222032473|emb|CAP75212.1| Protein tolQ [Escherichia coli LF82]
gi|226898510|gb|EEH84769.1| colicin uptake protein TolQ [Escherichia sp. 3_2_53FAA]
gi|227839048|gb|EEJ49514.1| colicin uptake protein TolQ [Escherichia coli 83972]
gi|281177880|dbj|BAI54210.1| TolQ protein [Escherichia coli SE15]
gi|294489766|gb|ADE88522.1| protein TolQ [Escherichia coli IHE3034]
gi|300297005|gb|EFJ53390.1| protein TolQ [Escherichia coli MS 185-1]
gi|300305365|gb|EFJ59885.1| protein TolQ [Escherichia coli MS 200-1]
gi|300406693|gb|EFJ90231.1| protein TolQ [Escherichia coli MS 45-1]
gi|305853619|gb|EFM54058.1| colicin uptake protein TolQ [Escherichia coli NC101]
gi|312945261|gb|ADR26088.1| colicin uptake protein TolQ [Escherichia coli O83:H1 str. NRG 857C]
gi|315287148|gb|EFU46560.1| protein TolQ [Escherichia coli MS 110-3]
gi|315292651|gb|EFU52003.1| protein TolQ [Escherichia coli MS 153-1]
gi|315299260|gb|EFU58512.1| protein TolQ [Escherichia coli MS 16-3]
gi|323953137|gb|EGB49004.1| TolQ protein [Escherichia coli H252]
gi|323958481|gb|EGB54187.1| TolQ protein [Escherichia coli H263]
gi|324009569|gb|EGB78788.1| protein TolQ [Escherichia coli MS 57-2]
gi|324010460|gb|EGB79679.1| protein TolQ [Escherichia coli MS 60-1]
gi|331044640|gb|EGI16767.1| protein TolQ [Escherichia coli M605]
gi|331055003|gb|EGI27012.1| protein TolQ [Escherichia coli TA206]
gi|331080591|gb|EGI51767.1| protein TolQ [Escherichia coli H299]
Length = 230
Score = 108 bits (271), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 115/218 (52%), Gaps = 3/218 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D++I LF++ L VK I+ +L FSI SW++IIQ++ R+ FE FWSG L
Sbjct: 3 DMNILDLFLKASLLVKLIMLILIGFSIASWAIIIQRTRILNAAAREAEAFEDKFWSGIEL 62
Query: 70 ETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + + + G IF S E+ + + +P + + R M +++ RELE
Sbjct: 63 SRLYQESQGKRDNLSGSEQIFYSGFKEFVRLHRANSHAPEAVVEGASRAMRISMNRELEN 122
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ + FLG++ S +G+ G V G+M F ++ + + PGI E+LI+ +GL
Sbjct: 123 LETHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMVAPGIAEALIATAIGL 182
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+IP+ +AYN+ + K + + F EF+AIL RQ
Sbjct: 183 FAAIPAVMAYNRLNQRVNKLELNYDNFMEEFTAILHRQ 220
>gi|209695362|ref|YP_002263291.1| TolQ protein, inner membrane component [Aliivibrio salmonicida
LFI1238]
gi|208009314|emb|CAQ79580.1| TolQ protein, inner membrane component [Aliivibrio salmonicida
LFI1238]
Length = 228
Score = 108 bits (271), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 109/218 (50%), Gaps = 3/218 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
++SI LF+ L VK ++ +L S++SW++I ++S FE FWSG L
Sbjct: 4 ELSILDLFLHASLLVKIVMLILLSLSVMSWAMIFKRSKVLAVAHTDAERFESKFWSGMDL 63
Query: 70 ETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ +K + G IF S +E+ + + S + D R M V ++RE+++
Sbjct: 64 AQLFNEVKVRKDRISGTEKIFYSGFNEFARLSRVNSSSSEAVMDGTIRSMRVTVSREVDD 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ L FL ++ S +G+ G V G+M F ++ + + PGI E+L++ +GL
Sbjct: 124 LETNLPFLATVGSITPYIGLFGTVWGIMHSFIALGAVKQATLAMVAPGIAEALVATAMGL 183
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+IP+ IAYN+ K F +EFS+IL RQ
Sbjct: 184 FAAIPAVIAYNQLSVKVGKLEHNYAAFMDEFSSILHRQ 221
>gi|89899953|ref|YP_522424.1| MotA/TolQ/ExbB proton channel [Rhodoferax ferrireducens T118]
gi|89901448|ref|YP_523919.1| MotA/TolQ/ExbB proton channel [Rhodoferax ferrireducens T118]
gi|89344690|gb|ABD68893.1| MotA/TolQ/ExbB proton channel [Rhodoferax ferrireducens T118]
gi|89346185|gb|ABD70388.1| MotA/TolQ/ExbB proton channel [Rhodoferax ferrireducens T118]
Length = 230
Score = 108 bits (271), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 71/218 (32%), Positives = 117/218 (53%), Gaps = 3/218 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+SI L + + V+ ++ LL + S+ SW+ I +K ++ FE+ FWSG SL
Sbjct: 4 DLSILRLVLNASVVVQLVMLLLVVVSMASWAAIFRKLFALKRVKLLNDTFEREFWSGTSL 63
Query: 70 ETV-CKSLKNHHNIG-LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + +N + G L IF S M E++K ++ + D R M + REL+
Sbjct: 64 NDLFSAAAQNARDSGPLERIFASGMREYQKLRERHITDASTLMDGARRAMRASYQRELDV 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ LSFL S+ S +G+ G V G+M F +A + + ++ PGI E+L++ +GL
Sbjct: 124 VEANLSFLASVGSVSPYLGLFGTVWGIMHAFTGLASMQTVTLATVAPGIAEALVATAIGL 183
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+IP+ +AYN+F D + A+++E F EFS IL R
Sbjct: 184 FAAIPAVVAYNRFAHDIDRIAIRLETFIEEFSNILQRN 221
>gi|188577431|ref|YP_001914360.1| protein TolQ [Xanthomonas oryzae pv. oryzae PXO99A]
gi|188521883|gb|ACD59828.1| protein TolQ [Xanthomonas oryzae pv. oryzae PXO99A]
Length = 259
Score = 108 bits (271), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 112/218 (51%), Gaps = 4/218 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
I+ L ++ + VK I+ LL I S +SW +I +K+ F R+ EFE FWSG L
Sbjct: 37 INYVDLILRASIPVKIIVLLLLIGSFISWVIIFRKARAFKQANREADEFENRFWSGADLA 96
Query: 71 TVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ S + + GL ++F E+ + D+ + R M A RE++++
Sbjct: 97 KLYASATDRNRTVGGLESMFEGGFREFSRLRDRRRLDARVQLEGAQRAMRTAFTREVDQL 156
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGL 186
L L ++ S VG++G V G+M + +G + PGI E+L + +GL
Sbjct: 157 ERNLELLANIGSTAPYVGLVGTVFGIMVTMHDMVSSGEQAGIAAVAPGISEALFATAIGL 216
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
V+IP+ AYN+F ++ +++ E FA+EFS+IL RQ
Sbjct: 217 FVAIPAVWAYNRFTTRVERLSVRYETFADEFSSILQRQ 254
>gi|254000103|ref|YP_003052166.1| protein TolQ [Methylovorus sp. SIP3-4]
gi|313202062|ref|YP_004040720.1| protein tolq [Methylovorus sp. MP688]
gi|253986782|gb|ACT51639.1| protein TolQ [Methylovorus sp. SIP3-4]
gi|312441378|gb|ADQ85484.1| protein TolQ [Methylovorus sp. MP688]
Length = 224
Score = 108 bits (270), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 109/218 (50%), Gaps = 3/218 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S++ L + V+ ++ +L + S++SW I K + + R FE+ FW G L
Sbjct: 6 DMSLYTLIAGASVPVQIVMAILLLTSLVSWWYIFIKVFSIRSAERDALAFEEEFWRGGDL 65
Query: 70 ETVCKSLK--NHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ S+ G+A+IF + E+ K +G + R M + RE+++
Sbjct: 66 NKLYDSVNAGRRRAQGMASIFEAGFKEYAKLKRQGGLEISDVTQSAQRAMRASYNREMDD 125
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ L FL S+ S +G+ G V G+M F+ ++ + + PGI E+L++ +GL
Sbjct: 126 LDSHLPFLASVGSVSPYIGLFGTVWGIMNAFRGLSNMAQATLSHVAPGIAEALVATAIGL 185
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+IP+ IAYN+F + A++ E F EF+ IL R
Sbjct: 186 FAAIPAVIAYNRFASAVDRLAVRYESFMEEFTNILQRN 223
>gi|58581288|ref|YP_200304.1| hypothetical protein XOO1665 [Xanthomonas oryzae pv. oryzae
KACC10331]
gi|84623206|ref|YP_450578.1| TolQ protein [Xanthomonas oryzae pv. oryzae MAFF 311018]
gi|58425882|gb|AAW74919.1| TolQ protein [Xanthomonas oryzae pv. oryzae KACC10331]
gi|84367146|dbj|BAE68304.1| TolQ protein [Xanthomonas oryzae pv. oryzae MAFF 311018]
Length = 259
Score = 108 bits (270), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 112/218 (51%), Gaps = 4/218 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
I+ L ++ + VK I+ LL I S +SW +I +K+ F R+ EFE FWSG L
Sbjct: 37 INYVDLILRASIPVKIIVLLLLIGSFISWVIIFRKARAFKQANREADEFENRFWSGADLA 96
Query: 71 TVCKSL--KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ S +N GL ++F E+ + D+ + R M A RE++++
Sbjct: 97 KLYASATDRNRSVGGLESMFEGGFREFSRLRDRRRLDARVQLEGAQRAMRTAFTREVDQL 156
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGL 186
L L ++ S VG++G V G+M + +G + PGI E+L + +GL
Sbjct: 157 ERNLELLANIGSTAPYVGLVGTVFGIMVTMHDMVSSGEQAGIAAVAPGISEALFATAIGL 216
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
V+IP+ AYN+F ++ +++ E FA+EFS+IL RQ
Sbjct: 217 FVAIPAVWAYNRFTTRVERLSVRYETFADEFSSILQRQ 254
>gi|15838498|ref|NP_299186.1| TolQ protein [Xylella fastidiosa 9a5c]
gi|9106995|gb|AAF84706.1|AE004010_3 TolQ protein [Xylella fastidiosa 9a5c]
Length = 257
Score = 108 bits (269), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 71/224 (31%), Positives = 113/224 (50%), Gaps = 4/224 (1%)
Query: 5 GLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFW 64
G A I+ L ++ + VK I+ LL + S SW +I +K+ F R+ +FE FW
Sbjct: 29 GTAHGGINYIDLMLKASIPVKIIVLLLLLGSFTSWVIIFRKARVFKQANREADQFENRFW 88
Query: 65 SGQSLETVCKSL--KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIA 122
SG L + S + H GL AIF E+ + ++ P + R+M
Sbjct: 89 SGTDLSKLYASTNSRKHMVSGLEAIFEGGFREFTRLRERRRLDPRIQIEGAQRVMRTNFM 148
Query: 123 RELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLI 180
RE++++ L L ++ S VG++G V G+M + +G + PGI E+L
Sbjct: 149 REMDQLERNLELLANIGSTAPYVGLVGTVFGIMVTMHDMISSGDQAGIAAVAPGISEALF 208
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+ +GL V+IP+ AYN+F ++ +++ E FA EFSAIL RQ
Sbjct: 209 ATAVGLFVAIPAVWAYNRFTTRVERLSVRYETFAEEFSAILQRQ 252
>gi|77163680|ref|YP_342205.1| MotA/TolQ/ExbB proton channel [Nitrosococcus oceani ATCC 19707]
gi|254435268|ref|ZP_05048775.1| protein TolQ [Nitrosococcus oceani AFC27]
gi|76881994|gb|ABA56675.1| Cell division and transport-associated protein TolQ [Nitrosococcus
oceani ATCC 19707]
gi|207088379|gb|EDZ65651.1| protein TolQ [Nitrosococcus oceani AFC27]
Length = 225
Score = 108 bits (269), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 99/190 (52%), Gaps = 3/190 (1%)
Query: 38 SWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHH--NIGLAAIFMSAMSEW 95
+W++I +K R + EFE FWSG+ L ++ L G+ IF++ SE+
Sbjct: 32 AWTLIFRKRSELKQAREEADEFEDRFWSGKELNSLYAELAAQELPPGGMEGIFLAGFSEF 91
Query: 96 KKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMM 155
+ + + D R M V++ARE++ + L FL + S +G+ G V G+M
Sbjct: 92 ARLRKQAGVEHRTVLDGTQRAMRVSLAREIDMLEASLPFLATAGSTSPYIGLFGTVWGIM 151
Query: 156 GFFQSIAGYYSNNVVSI-PGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFA 214
F+ + + + + PGI E+LI+ +GL +IP+ IAYN++ + ++ A + + F
Sbjct: 152 NSFRGLGNAHQATLAMVAPGIAEALIATAMGLFAAIPAVIAYNRYAYEVERLANRYDTFV 211
Query: 215 NEFSAILSRQ 224
EFS IL RQ
Sbjct: 212 EEFSTILQRQ 221
>gi|297539679|ref|YP_003675448.1| protein TolQ [Methylotenera sp. 301]
gi|297259026|gb|ADI30871.1| protein TolQ [Methylotenera sp. 301]
Length = 226
Score = 108 bits (269), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 111/222 (50%), Gaps = 3/222 (1%)
Query: 7 AIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG 66
A D+SIF+L L V+ ++ +L S+ SW I K +FE+ FWSG
Sbjct: 5 AANDMSIFSLVAGASLPVQMVLLVLIGTSLFSWWYIFIKLATIKKAETNAEDFEKAFWSG 64
Query: 67 QSLETVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARE 124
L + + L + G+A+IF + E+ + + + + R M A RE
Sbjct: 65 GDLNKLFEGLASSRRKPQGMASIFEAGFREYVRHKQQTTMDVSDVMEGSRRAMRAAYNRE 124
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISIL 183
L+++ L FL S+ S +G+ G V G+M F+ ++ + + PGI E+L++
Sbjct: 125 LDDLDAHLPFLASVGSVSPYIGLFGTVWGIMNAFRGLSNVAQATLSQVAPGIAEALVATA 184
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+GL +IP+ IAYN+F + +++ E F EF+ IL R++
Sbjct: 185 IGLFAAIPAVIAYNRFASSVDRLSVRYESFMEEFTNILQRKS 226
>gi|170749570|ref|YP_001755830.1| MotA/TolQ/ExbB proton channel [Methylobacterium radiotolerans JCM
2831]
gi|170656092|gb|ACB25147.1| MotA/TolQ/ExbB proton channel [Methylobacterium radiotolerans JCM
2831]
Length = 229
Score = 108 bits (269), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 107/217 (49%), Gaps = 17/217 (7%)
Query: 7 AIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG 66
A D S LF+Q VK ++ LL I SI W+V+ +K + RRQ + F L SG
Sbjct: 10 AAHDFSFLGLFLQADPIVKGVMILLVIASIACWTVVFEKVIRLAAARRQAKAFANLVRSG 69
Query: 67 QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
SL+ + + H + +A+ W+ R+ +DRI+R M A+ E++
Sbjct: 70 GSLDGEHRGIAGH-------VVKAAIDAWRDQDSSETRAER--RDRIERAMKGALTIEVK 120
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLG 185
+ LS L + S VG+ G V G+M F SIA ++ V PGI E+L + +G
Sbjct: 121 RLRTGLSLLATSGSTAPFVGLFGTVWGIMNSFSSIARSQDTSLAVVAPGIAEALFATAIG 180
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
L V+IP+ +AYNK D + G + FS+ +S
Sbjct: 181 LVVAIPAVMAYNKLASD-------VSGIQSTFSSYIS 210
>gi|118594341|ref|ZP_01551688.1| MotA/TolQ/ExbB proton channel [Methylophilales bacterium HTCC2181]
gi|118440119|gb|EAV46746.1| MotA/TolQ/ExbB proton channel [Methylophilales bacterium HTCC2181]
Length = 223
Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 110/218 (50%), Gaps = 4/218 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S F+L L V+ ++ +L S++SW I K +EFE+ FWSG L
Sbjct: 6 DLSFFSLIFGASLPVQLVMLILIAASVISWKFIYLKVKFLKESEENAQEFEKFFWSGGDL 65
Query: 70 ETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ +S+ N+ GLA IF S E+ + A I+ + R M + RE++
Sbjct: 66 AKLYESVSNNSRGINGLAEIFRSGYKEYMGQKEHQAFDKKSIES-VRRAMRASYNREIDT 124
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ + L FL S+ S +G+ G V G+M F ++ + + PGI E+LI+ +GL
Sbjct: 125 LDQHLPFLASVGSVSPYIGLFGTVWGIMNAFIGLSNVAQATLSQVAPGIAEALIATAIGL 184
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+IP+ IAYN+F + +++ E F EF I+ R+
Sbjct: 185 FAAIPAVIAYNRFATKVDRLSLRFESFIEEFINIVDRK 222
>gi|323143604|ref|ZP_08078281.1| protein TolQ [Succinatimonas hippei YIT 12066]
gi|322416667|gb|EFY07324.1| protein TolQ [Succinatimonas hippei YIT 12066]
Length = 326
Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 115/218 (52%), Gaps = 5/218 (2%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+S L + V+ ++ L S++SW++IIQ+S + R++ EFE+ FWSG L
Sbjct: 8 LSFTELVLNASFLVQLVMLFLLTLSVVSWTIIIQRSNQYKLGRKKADEFEEKFWSGIDLN 67
Query: 71 TVCKS-LKNHHN-IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ + +K H+ IGL I+ + E+ + + G + D R M VA +RE+E +
Sbjct: 68 NLYQDCVKRQHSLIGLEVIYSAGFKEFVRLVNSGPADQEVVMDGTYRQMKVAASREIENL 127
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI--PGIIESLISILLGL 186
L L ++ S +G+ G V G+M F ++A N +S+ P I E+LI+ +GL
Sbjct: 128 ETHLPTLATIGSISPYIGLFGTVWGIMHAFVALAA-VKNATLSMVAPPIAEALIATAMGL 186
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+IP+ + YN+F + + F +EF+ IL+R+
Sbjct: 187 FAAIPAVMFYNRFTTKLEALENRYLNFMDEFATILNRR 224
>gi|309786416|ref|ZP_07681042.1| protein TolQ [Shigella dysenteriae 1617]
gi|308925810|gb|EFP71291.1| protein TolQ [Shigella dysenteriae 1617]
Length = 227
Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 114/217 (52%), Gaps = 3/217 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
++I LF++ L VK I+ +L FSI SW+VIIQ++ R+ FE FWSG L
Sbjct: 1 MNILDLFLKASLLVKLIMLILIGFSIASWAVIIQRTRILNAAAREAEAFEDKFWSGIELS 60
Query: 71 TVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ + + + G IF S E+ + + +P + + R M +++ RELE +
Sbjct: 61 RLYQESQGKRDNLTGSEQIFYSGFKEFVRLHRANSHAPEAVVEGASRAMRISMNRELENL 120
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLC 187
+ FLG++ S +G+ G V G+M F ++ + + PGI E+LI+ +GL
Sbjct: 121 ETHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMVAPGIAEALIATAIGLF 180
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+IP+ +AYN+ + K + + F EF+AIL RQ
Sbjct: 181 AAIPAVMAYNRLNQRVNKLELNYDNFMEEFTAILHRQ 217
>gi|53804467|ref|YP_113690.1| tolQ protein [Methylococcus capsulatus str. Bath]
gi|53758228|gb|AAU92519.1| tolQ protein [Methylococcus capsulatus str. Bath]
Length = 225
Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 111/220 (50%), Gaps = 3/220 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
++SI L + V+ ++ +L S++SW+ I K + FE FWSG L
Sbjct: 4 ELSIITLIKEASPVVQIVMFILVAASVISWTFIFGKYREIRRAEQTSIAFEDRFWSGIDL 63
Query: 70 ETVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + L + GL IF++ E+ + + P + + R M VA+ REL++
Sbjct: 64 ADLYRQLATESDDCGGLELIFLAGFKEFGRLRQQSGIMPEAVMEGTQRAMRVALNRELDK 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ E+L FL ++ S +G+ G V G+M F+S+ + + PGI E+L++ +GL
Sbjct: 124 LDERLPFLATVGSTSPYIGLFGTVWGIMNSFRSLGSVKQATLAMVAPGISEALVATAMGL 183
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ IAYN++ + + A + E F E ++L RQ
Sbjct: 184 FAAIPAVIAYNRYSTNISRLANRYESFTEELLSLLHRQAH 223
>gi|311694929|gb|ADP97802.1| MotA/TolQ/ExbB proton channel [marine bacterium HP15]
Length = 229
Score = 107 bits (267), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 117/218 (53%), Gaps = 4/218 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
++S++ L G+ V+ ++ LL + SI+SW++I Q+ F +R FE+ FWSG L
Sbjct: 4 ELSVWYLIANAGVLVQLVMLLLALASIMSWALIFQRLQVFRKAKRAQLAFEERFWSGMDL 63
Query: 70 ETVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + + G+ ++F + E+ + + +R + + R M VA +RE E
Sbjct: 64 GQLYREVNADPTPFSGMESLFRAGFKEFSR-LRQQSRDADAVMEGTQRAMRVAFSREHER 122
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ L FL ++ S VG+ G V G+M F+ +A + ++ PGI E+LI+ +GL
Sbjct: 123 LEASLPFLATVGSTSPYVGLFGTVWGIMNSFRGLAQVQQATLATVAPGISEALIATAMGL 182
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+IP+ IAYN+F S E FA+EFS+IL R+
Sbjct: 183 FAAIPAVIAYNRFSAMSDALLKNYETFADEFSSILHRR 220
>gi|71275799|ref|ZP_00652083.1| MotA/TolQ/ExbB proton channel [Xylella fastidiosa Dixon]
gi|71900398|ref|ZP_00682531.1| MotA/TolQ/ExbB proton channel [Xylella fastidiosa Ann-1]
gi|170730221|ref|YP_001775654.1| TolQ protein [Xylella fastidiosa M12]
gi|71163377|gb|EAO13095.1| MotA/TolQ/ExbB proton channel [Xylella fastidiosa Dixon]
gi|71729830|gb|EAO31928.1| MotA/TolQ/ExbB proton channel [Xylella fastidiosa Ann-1]
gi|167965014|gb|ACA12024.1| TolQ protein [Xylella fastidiosa M12]
Length = 257
Score = 107 bits (267), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 111/218 (50%), Gaps = 4/218 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
I+ L ++ + VK I+ LL + S SW +I +K+ F R+ +FE FWSG L
Sbjct: 35 INYIDLMLKASIPVKIIVLLLLLGSFTSWVIIFRKARVFKQANREADQFENRFWSGTDLS 94
Query: 71 TVCKSL--KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ S + H GL AIF E+ + ++ P + R+M RE++++
Sbjct: 95 KLYASTNSRKHMVSGLEAIFEGGFREFTRLRERRRLDPRIQIEGAQRVMRTNFMREMDQL 154
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGL 186
L L ++ S VG++G V G+M + +G + PGI E+L + +GL
Sbjct: 155 ERNLELLANIGSTAPYVGLVGTVFGIMVTMHDMISSGDQAGIAAVAPGISEALFATAVGL 214
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
V+IP+ AYN+F ++ +++ E FA EFSAIL RQ
Sbjct: 215 FVAIPAVWAYNRFTTRVERLSVRYETFAEEFSAILQRQ 252
>gi|113460405|ref|YP_718467.1| biopolymer transport protein [Haemophilus somnus 129PT]
gi|112822448|gb|ABI24537.1| Cell division and transport-associated protein TolQ [Haemophilus
somnus 129PT]
Length = 227
Score = 107 bits (267), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 117/222 (52%), Gaps = 5/222 (2%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
++ LF++ + V+ +I +L FSI+SW++IIQ+S + FE+ FWSG+ L
Sbjct: 4 ELDFLELFLKASIVVQIVIVILISFSIISWAIIIQRSRILTRALKDSTLFEERFWSGEDL 63
Query: 70 ETVCKSLKNHHNIGLAA---IFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
+ L N N GL + IF E+ + +P I R M++A+ RE+E
Sbjct: 64 YKLYDGLSNRRN-GLNSSERIFYVGFKEFNRLKQANPDAPEAIIQGSSRAMNLAMNREVE 122
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLG 185
++ ++ FL +++S +G+ G V G+M F +++G + + PGI E+LI+ +G
Sbjct: 123 DLETRVPFLATVASISPYIGLFGTVWGIMHAFMALSGAKQATLQMVAPGIAEALIATAIG 182
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEG 227
L +IP+ +AYN+ K F +EF+ IL RQ G
Sbjct: 183 LFAAIPAVMAYNRLSLRVNKLEQNYANFIDEFTTILHRQAFG 224
>gi|254239317|ref|ZP_04932640.1| TolQ protein [Pseudomonas aeruginosa C3719]
gi|126171248|gb|EAZ56759.1| TolQ protein [Pseudomonas aeruginosa C3719]
Length = 231
Score = 107 bits (267), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 112/216 (51%), Gaps = 3/216 (1%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLET 71
S+++L + V+ ++ L S+ SW +I Q+ ++ FE+ FWSG L
Sbjct: 10 SMWSLISNASIVVQLVMLTLVAASVTSWIMIFQRGNAMRAAKKALDAFEERFWSGIDLSK 69
Query: 72 VCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+ + ++ + G+ IF + E+ + + P + + + M VAI+RE E++
Sbjct: 70 LYRQAGSNPDPDSGVEQIFRAGFKEFSRLRQQPGVDPDAVMEGVALAMRVAISREEEKLE 129
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCV 188
L FL ++ S VG+ G V G+M F+ +A + ++ PGI E+LI+ +GL
Sbjct: 130 ASLPFLATVGSTSPYVGLFGTVWGIMNSFRGLATVQQATLATVAPGIAEALIATAIGLFA 189
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+IP+ IAYN+F S+ + FA+EF AIL R+
Sbjct: 190 AIPAVIAYNRFSARSEMLIGRYYTFADEFQAILHRK 225
>gi|294637424|ref|ZP_06715715.1| protein TolQ [Edwardsiella tarda ATCC 23685]
gi|291089417|gb|EFE21978.1| protein TolQ [Edwardsiella tarda ATCC 23685]
Length = 224
Score = 107 bits (267), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 109/218 (50%), Gaps = 3/218 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
++I LF++ + VK I+ +L FS+ SW++IIQ++ R FE FWSG L
Sbjct: 1 MNILDLFLKASVLVKLIMLVLICFSVASWAIIIQRTRILNAATRDAEAFEDKFWSGIELS 60
Query: 71 TVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ + + + G IF + E+ + + + G+ + R M +++ RE+E +
Sbjct: 61 RLYQESQTRRDTLNGSEQIFYAGFKEFARLHRMNSHATEGVIEGASRAMRISLNREVEAL 120
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLC 187
+ FLG++ S +G+ G V G+M F + + + PGI E+LI+ +GL
Sbjct: 121 ETHIPFLGTVGSISPYIGLFGTVWGIMHAFIGLGAVKQATLQMVAPGIAEALIATAIGLF 180
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ +AYN+ K E F EF AIL RQ
Sbjct: 181 AAIPAVMAYNRLNLRVNKLEQNYENFMEEFIAILHRQA 218
>gi|149375114|ref|ZP_01892886.1| Biopolymer transport protein [Marinobacter algicola DG893]
gi|149360478|gb|EDM48930.1| Biopolymer transport protein [Marinobacter algicola DG893]
Length = 229
Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 120/222 (54%), Gaps = 4/222 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
++S++ L G+ V+ ++ LL + SI+SW++I Q+ F ++ FE+ FWSG L
Sbjct: 4 EVSVWYLIANAGVLVQLVMLLLALASIISWALIFQRLKVFRKAKQAQYAFEERFWSGMDL 63
Query: 70 ETVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + + ++ G+ ++F + E+ + + +R + + R M VA +RE E
Sbjct: 64 GQLYREVNSNPTPFSGMESLFRAGFKEFSR-LRQQSRDADAVMEGTQRAMRVAFSREQER 122
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ L FL ++ S VG+ G V G+M F+ +A + ++ PGI E+LI+ +GL
Sbjct: 123 LEMHLPFLATVGSTSPYVGLFGTVWGIMNSFRGLAQVQQATLATVAPGISEALIATAMGL 182
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
+IP+ IAYN+F S E FA+EFS+IL R+ +
Sbjct: 183 FAAIPAVIAYNRFSAISDALLKNYETFADEFSSILHRRVHNS 224
>gi|110804637|ref|YP_688157.1| colicin uptake protein TolQ [Shigella flexneri 5 str. 8401]
gi|170020918|ref|YP_001725872.1| colicin uptake protein TolQ [Escherichia coli ATCC 8739]
gi|170768990|ref|ZP_02903443.1| protein TolQ [Escherichia albertii TW07627]
gi|256021188|ref|ZP_05435053.1| colicin uptake protein TolQ [Shigella sp. D9]
gi|293403992|ref|ZP_06647986.1| colicin uptake protein TolQ [Escherichia coli FVEC1412]
gi|293409121|ref|ZP_06652697.1| TolQ protein [Escherichia coli B354]
gi|293414022|ref|ZP_06656671.1| TolQ protein [Escherichia coli B185]
gi|293433005|ref|ZP_06661433.1| TolQ [Escherichia coli B088]
gi|298379772|ref|ZP_06989377.1| biopolymer transporter TolQ [Escherichia coli FVEC1302]
gi|110614185|gb|ABF02852.1| TolQ protein [Shigella flexneri 5 str. 8401]
gi|169755846|gb|ACA78545.1| protein TolQ [Escherichia coli ATCC 8739]
gi|170122062|gb|EDS90993.1| protein TolQ [Escherichia albertii TW07627]
gi|291323824|gb|EFE63246.1| TolQ [Escherichia coli B088]
gi|291428578|gb|EFF01603.1| colicin uptake protein TolQ [Escherichia coli FVEC1412]
gi|291434080|gb|EFF07053.1| TolQ protein [Escherichia coli B185]
gi|291469589|gb|EFF12073.1| TolQ protein [Escherichia coli B354]
gi|298279470|gb|EFI20978.1| biopolymer transporter TolQ [Escherichia coli FVEC1302]
gi|315135394|dbj|BAJ42553.1| inner membrane protein [Escherichia coli DH1]
gi|323153747|gb|EFZ39994.1| protein TolQ [Escherichia coli EPECa14]
gi|323938276|gb|EGB34534.1| TolQ protein [Escherichia coli E1520]
gi|323946997|gb|EGB43011.1| TolQ protein [Escherichia coli H120]
gi|323972023|gb|EGB67243.1| TolQ protein [Escherichia coli TA007]
gi|323976282|gb|EGB71372.1| TolQ protein [Escherichia coli TW10509]
gi|326345733|gb|EGD69472.1| MotA/TolQ/ExbB proton channel family protein [Escherichia coli
O157:H7 str. 1125]
gi|327254426|gb|EGE66048.1| protein TolQ [Escherichia coli STEC_7v]
gi|332097657|gb|EGJ02632.1| protein TolQ [Shigella boydii 3594-74]
gi|332342074|gb|AEE55408.1| colicin uptake protein TolQ [Escherichia coli UMNK88]
gi|332763943|gb|EGJ94181.1| protein TolQ [Shigella flexneri K-671]
gi|333007352|gb|EGK26832.1| protein TolQ [Shigella flexneri VA-6]
Length = 227
Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 114/217 (52%), Gaps = 3/217 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
++I LF++ L VK I+ +L FSI SW++IIQ++ R+ FE FWSG L
Sbjct: 1 MNILDLFLKASLLVKLIMLILIGFSIASWAIIIQRTRILNAAAREAEAFEDKFWSGIELS 60
Query: 71 TVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ + + + G IF S E+ + + +P + + R M +++ RELE +
Sbjct: 61 RLYQESQGKRDNLTGSEQIFYSGFKEFVRLHRANSHAPEAVVEGASRAMRISMNRELENL 120
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLC 187
+ FLG++ S +G+ G V G+M F ++ + + PGI E+LI+ +GL
Sbjct: 121 ETHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMVAPGIAEALIATAIGLF 180
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+IP+ +AYN+ + K + + F EF+AIL RQ
Sbjct: 181 AAIPAVMAYNRLNQRVNKLELNYDNFMEEFTAILHRQ 217
>gi|119944495|ref|YP_942175.1| MotA/TolQ/ExbB proton channel [Psychromonas ingrahamii 37]
gi|119863099|gb|ABM02576.1| MotA/TolQ/ExbB proton channel [Psychromonas ingrahamii 37]
Length = 227
Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 109/219 (49%), Gaps = 3/219 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S LF+Q VK ++ LL SI SW++I ++ N + + + FE+ FWSG L
Sbjct: 4 DMSFLGLFLQASWLVKFVLILLLGMSIYSWTLIFSRTKNLKSSEKALKLFEERFWSGHDL 63
Query: 70 ETVCK--SLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ K + ++ G IF E+ + R+ + R+M V ++RE++E
Sbjct: 64 SRLYKESAARSERITGGEKIFHGGFKEFSRLHRIPGRTVDSTTEGAHRIMRVTLSREIDE 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ L L ++ S +G+ G V G+M F ++ + + PGI E+LI+ +GL
Sbjct: 124 LETGLPVLATIGSISPYIGLFGTVWGIMNSFIALGEVQQATLTMVAPGIAEALIATAMGL 183
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ +AYN+F K EF++IL RQ+
Sbjct: 184 FAAIPAVMAYNRFSTQVGKLETAYINLMEEFTSILHRQS 222
>gi|144897126|emb|CAM73990.1| MotA/TolQ/ExbB proton channel family protin [Magnetospirillum
gryphiswaldense MSR-1]
Length = 208
Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 90/161 (55%), Gaps = 4/161 (2%)
Query: 6 LAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS 65
+A D+S++ LFMQ VK ++ L S W++I K + +L ++ +FE+ FWS
Sbjct: 13 VAAHDMSMWGLFMQADFIVKTVMIALLASSFWCWAIIFDKLLRLRSLSQRAEQFEESFWS 72
Query: 66 GQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKG----ARSPIGIQDRIDRMMDVAI 121
G SLE + + ++AIF +AM EW++S KG + + + RIDR+M V +
Sbjct: 73 GGSLEELYDRIGARPLDPMSAIFAAAMREWRRSAAKGLTERETARVSLPQRIDRVMHVTL 132
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA 162
RE++ + L L S+ S LVG+ G V G+M FQSIA
Sbjct: 133 GREMDTLERNLGVLASVGSTAPLVGLFGTVWGIMNSFQSIA 173
>gi|307579946|gb|ADN63915.1| protein TolQ [Xylella fastidiosa subsp. fastidiosa GB514]
Length = 256
Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 111/218 (50%), Gaps = 4/218 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
I+ L ++ + VK I+ LL + S SW +I +K+ F R+ +FE FWSG L
Sbjct: 34 INYIDLMLKASIPVKIIVLLLLLGSFTSWLIIFRKARVFKQANREADQFENRFWSGTDLS 93
Query: 71 TVCKSL--KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ S + H GL AIF E+ + ++ P + R+M RE++++
Sbjct: 94 KLYASTNSRKHMVSGLEAIFEGGFREFTRLRERRRLDPRIQIEGAQRVMRTNFMREMDQL 153
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGL 186
L L ++ S VG++G V G+M + +G + PGI E+L + +GL
Sbjct: 154 ERNLELLANIGSTAPYVGLVGTVFGIMVTMHDMISSGDQAGIAAVAPGISEALFATAVGL 213
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
V+IP+ AYN+F ++ +++ E FA EFSAIL RQ
Sbjct: 214 FVAIPAVWAYNRFTTRLERLSVRYETFAEEFSAILQRQ 251
>gi|71901738|ref|ZP_00683810.1| MotA/TolQ/ExbB proton channel [Xylella fastidiosa Ann-1]
gi|71728510|gb|EAO30669.1| MotA/TolQ/ExbB proton channel [Xylella fastidiosa Ann-1]
Length = 257
Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 111/218 (50%), Gaps = 4/218 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
I+ L ++ + VK I+ LL + S SW +I +K+ F R+ +FE FWSG L
Sbjct: 35 INYIDLMLKASIPVKIIVLLLLLGSFTSWLIIFRKARVFKQANREADQFENRFWSGTDLS 94
Query: 71 TVCKSL--KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ S + H GL AIF E+ + ++ P + R+M RE++++
Sbjct: 95 KLYASTNSRKHMVSGLEAIFEGGFREFTRLRERRRLDPRIQIEGAQRVMRTNFMREMDQL 154
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGL 186
L L ++ S VG++G V G+M + +G + PGI E+L + +GL
Sbjct: 155 ERNLELLANIGSTAPYVGLVGTVFGIMVTMHDMISSGDQAGIAAVAPGISEALFATAVGL 214
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
V+IP+ AYN+F ++ +++ E FA EFSAIL RQ
Sbjct: 215 FVAIPAVWAYNRFTTRLERLSVRYETFAEEFSAILQRQ 252
>gi|28198793|ref|NP_779107.1| TolQ protein [Xylella fastidiosa Temecula1]
gi|182681492|ref|YP_001829652.1| protein TolQ [Xylella fastidiosa M23]
gi|28056884|gb|AAO28756.1| TolQ protein [Xylella fastidiosa Temecula1]
gi|182631602|gb|ACB92378.1| protein TolQ [Xylella fastidiosa M23]
Length = 257
Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 111/218 (50%), Gaps = 4/218 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
I+ L ++ + VK I+ LL + S SW +I +K+ F R+ +FE FWSG L
Sbjct: 35 INYIDLMLKASIPVKIIVLLLLLGSFTSWLIIFRKARVFKQANREADQFENRFWSGTDLS 94
Query: 71 TVCKSL--KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ S + H GL AIF E+ + ++ P + R+M RE++++
Sbjct: 95 KLYASTNSRKHMVSGLEAIFEGGFREFTRLRERRRLDPRIQIEGAQRVMRTNFMREMDQL 154
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGL 186
L L ++ S VG++G V G+M + +G + PGI E+L + +GL
Sbjct: 155 ERNLELLANIGSTAPYVGLVGTVFGIMVTMHDMISSGDQAGIAAVAPGISEALFATAVGL 214
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
V+IP+ AYN+F ++ +++ E FA EFSAIL RQ
Sbjct: 215 FVAIPAVWAYNRFTTRLERLSVRYETFAEEFSAILQRQ 252
>gi|92113973|ref|YP_573901.1| MotA/TolQ/ExbB proton channel [Chromohalobacter salexigens DSM
3043]
gi|91797063|gb|ABE59202.1| Cell division and transport-associated protein TolQ
[Chromohalobacter salexigens DSM 3043]
Length = 225
Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 104/196 (53%), Gaps = 3/196 (1%)
Query: 35 SILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLK-NHHNIGLAAIFMSAMS 93
S+ SW VI Q+ + +R+FE FWSG L + + L ++G +F S
Sbjct: 25 SVASWIVIFQRGFALRRAEKAYRDFEDRFWSGVDLNELYRELPAEQESLGAEHVFRSGFR 84
Query: 94 EWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLG 153
E+ + K +S + + + R VA++RE + + L+FL +++SA +G+ G V G
Sbjct: 85 EFNRLMAK-TQSTEAVLEGVQRGQRVALSREEDRLQLHLTFLATVASATPYIGLFGTVWG 143
Query: 154 MMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEG 212
+MG FQS++ + ++ P I E+L++ +GL +IP+ I YN+ + + + E
Sbjct: 144 IMGSFQSLSMAQQATLSTVAPWIAEALVATAMGLFAAIPAVIFYNRLSAHATRLLGKYEN 203
Query: 213 FANEFSAILSRQTEGN 228
FA EF AIL R +G
Sbjct: 204 FAEEFHAILHRNLQGR 219
>gi|325498080|gb|EGC95939.1| colicin uptake protein TolQ [Escherichia fergusonii ECD227]
Length = 227
Score = 106 bits (264), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 114/218 (52%), Gaps = 3/218 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
++I LF++ L VK I+ +L FSI SW++IIQ++ R+ FE FWSG L
Sbjct: 1 MNILDLFLKASLLVKLIMLILIGFSIASWAIIIQRTRILNAAAREAEAFEDKFWSGIELS 60
Query: 71 TVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ + + + G IF S E+ + + +P + + R M +++ RELE +
Sbjct: 61 RLYQESQGRRDNLSGSEQIFYSGFKEFVRLHRANSHAPEAVVEGASRAMRISMNRELENL 120
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLC 187
+ FLG++ S +G+ G V G+M F ++ + + PGI E+LI+ +GL
Sbjct: 121 ETHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMVAPGIAEALIATAIGLF 180
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ +AYN+ + K + + F EF+AIL RQ
Sbjct: 181 AAIPAVMAYNRLNQRVNKLELNYDNFMEEFTAILHRQA 218
>gi|90408533|ref|ZP_01216690.1| tol protein, membrane-spanning inner membrane protein, required for
outer membrane integrity, uptake of group A
[Psychromonas sp. CNPT3]
gi|90310352|gb|EAS38480.1| tol protein, membrane-spanning inner membrane protein, required for
outer membrane integrity, uptake of group A
[Psychromonas sp. CNPT3]
Length = 227
Score = 106 bits (264), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 110/222 (49%), Gaps = 11/222 (4%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
++S LF+Q L VK ++ LL S+ SW++I +S FE+ FWSG L
Sbjct: 4 EMSFLGLFLQASLLVKFVMLLLLAMSVYSWTIIFSRSRVLKAAHEALEHFEKRFWSGHDL 63
Query: 70 -----ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARE 124
ET +S + G IF E+ + R+ + + R M V ++RE
Sbjct: 64 SRLYQETAARSERIG---GGEKIFFQGFKEFSRLHTMPGRNVDSVTEGAHRSMRVVLSRE 120
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYY--SNNVVSIPGIIESLISI 182
+EE+ E LS L ++ S +G+ G V G+M F ++ S N+V+ PGI E+LI+
Sbjct: 121 VEELEEGLSALATIGSISPYIGLFGTVWGIMNAFMALGQVQQASLNMVA-PGIAEALIAT 179
Query: 183 LLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+GL +IP+ +AYN++ + EF++IL RQ
Sbjct: 180 AMGLFAAIPAVMAYNRYTAKMMRLETAYINLMEEFTSILHRQ 221
>gi|56460191|ref|YP_155472.1| TonB system biopolymer transport component [Idiomarina loihiensis
L2TR]
gi|56179201|gb|AAV81923.1| TonB system biopolymer transport component [Idiomarina loihiensis
L2TR]
Length = 236
Score = 106 bits (264), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 109/219 (49%), Gaps = 3/219 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
++S LFMQ L VK ++ +L S+ W +I Q+ R +FE FWSG L
Sbjct: 4 ELSFIDLFMQASLLVKLVMVMLLAMSVWGWVLIFQRKKVLKQARNDALKFEDRFWSGVDL 63
Query: 70 ETVCK--SLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + S + + G+ +F + E+ + + + + + R M VA ARE E+
Sbjct: 64 ARLYQEISARAKNARGMELLFHAGFKEYARLRNHSTTNTQTMLEGAFRAMRVAHARETEK 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ L L ++ S +G+ G V G+M F ++ + + PGI E+LI+ +GL
Sbjct: 124 LDNNLGILATIGSISPYIGLFGTVWGIMNAFIALGAVQQATLAMVAPGIAEALIATAMGL 183
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ IAYN+F +K Q F +EF +IL RQ+
Sbjct: 184 FAAIPAVIAYNRFTTSVEKVDNQYMNFIDEFISILQRQS 222
>gi|32491164|ref|NP_871418.1| hypothetical protein WGLp415 [Wigglesworthia glossinidia
endosymbiont of Glossina brevipalpis]
gi|25166371|dbj|BAC24561.1| tolQ [Wigglesworthia glossinidia endosymbiont of Glossina
brevipalpis]
Length = 235
Score = 106 bits (264), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/221 (32%), Positives = 107/221 (48%), Gaps = 4/221 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
+++ +IF LF++ L +K I LF SI SW +I K L ++ FE+ FWS +
Sbjct: 1 MINTNIFDLFLKSDLILKIIFLFLFFCSITSWMIIFYKFFILRKLEKKMEIFEKKFWSKK 60
Query: 68 SLETVCK--SLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
++ + S G IF E+ K + P + + R M++ RE+
Sbjct: 61 NISNIYNDISFNKKELTGCEQIFFYGFKEFSKLNHEEVNDPQSVINGTKRAMNIITNREI 120
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVS--IPGIIESLISIL 183
E I LS LGS+SS VG+LG V +M F I GY N + P I E+L +
Sbjct: 121 EFIEFNLSTLGSISSVSPYVGLLGTVWSIMNTFYKIGGYSENITIQNIAPEISEALSTTA 180
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+ L V+IP+ IA+NK S + F+ E SAIL R+
Sbjct: 181 ISLFVAIPALIAFNKLNVKSNIISQNYLNFSEELSAILHRK 221
>gi|110640945|ref|YP_668673.1| colicin uptake protein TolQ [Escherichia coli 536]
gi|312965173|ref|ZP_07779410.1| protein TolQ [Escherichia coli 2362-75]
gi|110342537|gb|ABG68774.1| TolQ protein [Escherichia coli 536]
gi|307552588|gb|ADN45363.1| membrane spanning protein in TolA-TolQ-TolR complex [Escherichia
coli ABU 83972]
gi|307627849|gb|ADN72153.1| colicin uptake protein TolQ [Escherichia coli UM146]
gi|312290264|gb|EFR18147.1| protein TolQ [Escherichia coli 2362-75]
gi|320194084|gb|EFW68716.1| MotA/TolQ/ExbB proton channel family protein [Escherichia coli
WV_060327]
gi|330910488|gb|EGH38998.1| motA/TolQ/ExbB proton channel family protein [Escherichia coli
AA86]
Length = 227
Score = 106 bits (264), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 114/218 (52%), Gaps = 3/218 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
++I LF++ L VK I+ +L FSI SW++IIQ++ R+ FE FWSG L
Sbjct: 1 MNILDLFLKASLLVKLIMLILIGFSIASWAIIIQRTRILNAAAREAEAFEDKFWSGIELS 60
Query: 71 TVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ + + + G IF S E+ + + +P + + R M +++ RELE +
Sbjct: 61 RLYQESQGKRDNLSGSEQIFYSGFKEFVRLHRANSHAPEAVVEGASRAMRISMNRELENL 120
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLC 187
+ FLG++ S +G+ G V G+M F ++ + + PGI E+LI+ +GL
Sbjct: 121 ETHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMVAPGIAEALIATAIGLF 180
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ +AYN+ + K + + F EF+AIL RQ
Sbjct: 181 AAIPAVMAYNRLNQRVNKLELNYDNFMEEFTAILHRQA 218
>gi|119472452|ref|ZP_01614551.1| inner membrane protein [Alteromonadales bacterium TW-7]
gi|119444889|gb|EAW26188.1| inner membrane protein [Alteromonadales bacterium TW-7]
Length = 234
Score = 105 bits (263), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 116/231 (50%), Gaps = 14/231 (6%)
Query: 5 GLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFW 64
GL +D L ++ L V+ ++ L S++SW++I Q+ ++FEQ FW
Sbjct: 4 GLNFLD-----LILEASLLVQLVMLGLVAMSVMSWAIIFQRKKAISDALSNAKKFEQKFW 58
Query: 65 SGQSL-----ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDV 119
SG L E +S ++H G+ A+F + E+ + + + + R M V
Sbjct: 59 SGIDLSKLYNEISSRSAQSH---GIEALFTAGFKEFARHKKNTFQGASIVMEGTHRSMRV 115
Query: 120 AIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIES 178
A++RE+E+I + LSFL ++ S +G+ G V G+M F ++ + + PGI E+
Sbjct: 116 ALSREIEKIEKSLSFLATVGSISPYIGLFGTVWGIMNAFIALGEVKQATLQMVAPGIAEA 175
Query: 179 LISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNI 229
LI+ +GL +IP+ IAYN+F +K F EF+ IL RQ I
Sbjct: 176 LIATAMGLFAAIPAVIAYNRFSNSVEKLESHYINFMEEFANILHRQAATQI 226
>gi|224823452|ref|ZP_03696561.1| protein TolQ [Lutiella nitroferrum 2002]
gi|224603907|gb|EEG10081.1| protein TolQ [Lutiella nitroferrum 2002]
Length = 216
Score = 105 bits (263), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 110/212 (51%), Gaps = 4/212 (1%)
Query: 15 ALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCK 74
+L + L V+ ++ L + S+LSW++II K + RR FEQ FW G L + +
Sbjct: 2 SLILNASLVVQLVMLGLALLSVLSWTLIISKLGTLRSARRHSESFEQNFWGGTDLNRLYE 61
Query: 75 SLKNHHN-IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLS 133
+ + +G+ IF S +E+ K + I D R M A REL+ + S
Sbjct: 62 DARQQGDTVGMERIFQSGFAEFLKQRGRSGAELSDIMDGARRAMRAAAQRELDRLDSHTS 121
Query: 134 FLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGLCVSIP 191
FL ++ S +G+ G V G+M F + AG + + V+ PGI E+L++ +GL +IP
Sbjct: 122 FLATVGSVSPYIGLFGTVWGIMHAFIGLGNAGQATLSTVA-PGIAEALVATAIGLFAAIP 180
Query: 192 SSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
+ +AYN+F D + A + + F EFS IL R
Sbjct: 181 AVVAYNRFAADVDRLASRFDTFMEEFSNILQR 212
>gi|213028045|ref|ZP_03342492.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Typhi str. 404ty]
gi|213051764|ref|ZP_03344642.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Typhi str. E00-7866]
gi|213425395|ref|ZP_03358145.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Typhi str. E02-1180]
gi|213649141|ref|ZP_03379194.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Typhi str. J185]
gi|213857295|ref|ZP_03384266.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Typhi str. M223]
gi|224582564|ref|YP_002636362.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|238911678|ref|ZP_04655515.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Tennessee str. CDC07-0191]
gi|289824365|ref|ZP_06543958.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Typhi str. E98-3139]
gi|291084643|ref|ZP_06540569.2| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Typhi str. AG3]
gi|224467091|gb|ACN44921.1| tolQ protein [Salmonella enterica subsp. enterica serovar Paratyphi
C strain RKS4594]
gi|312911772|dbj|BAJ35746.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Typhimurium str. T000240]
gi|320085016|emb|CBY94805.1| Protein tolQ [Salmonella enterica subsp. enterica serovar
Weltevreden str. 2007-60-3289-1]
gi|321226324|gb|EFX51375.1| MotA/TolQ/ExbB proton channel family protein [Salmonella enterica
subsp. enterica serovar Typhimurium str. TN061786]
gi|322615821|gb|EFY12739.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Montevideo str. 315996572]
gi|322621380|gb|EFY18236.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-1]
gi|322628910|gb|EFY25690.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-4]
gi|322634889|gb|EFY31619.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-1]
gi|322636583|gb|EFY33287.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-2]
gi|322641767|gb|EFY38401.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Montevideo str. 531954]
gi|322647824|gb|EFY44304.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Montevideo str. NC_MB110209-0054]
gi|322651846|gb|EFY48215.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Montevideo str. OH_2009072675]
gi|322652657|gb|EFY49006.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Montevideo str. CASC_09SCPH15965]
gi|322658464|gb|EFY54727.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Montevideo str. 19N]
gi|322664933|gb|EFY61124.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Montevideo str. 81038-01]
gi|322668398|gb|EFY64554.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Montevideo str. MD_MDA09249507]
gi|322675254|gb|EFY71330.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Montevideo str. 366867]
gi|322679680|gb|EFY75721.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Montevideo str. 413180]
gi|322684844|gb|EFY80843.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Montevideo str. 446600]
gi|323193162|gb|EFZ78381.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Montevideo str. 609458-1]
gi|323200613|gb|EFZ85688.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Montevideo str. 556150-1]
gi|323202284|gb|EFZ87332.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Montevideo str. 609460]
gi|323205448|gb|EFZ90414.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Montevideo str. 507440-20]
gi|323213512|gb|EFZ98305.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Montevideo str. 556152]
gi|323215347|gb|EGA00092.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Montevideo str. MB101509-0077]
gi|323221779|gb|EGA06186.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Montevideo str. MB102109-0047]
gi|323228091|gb|EGA12227.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Montevideo str. MB110209-0055]
gi|323234165|gb|EGA18254.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009083312]
gi|323238140|gb|EGA22198.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009085258]
gi|323243575|gb|EGA27593.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Montevideo str. 315731156]
gi|323247400|gb|EGA31359.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2009159199]
gi|323251389|gb|EGA35261.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008282]
gi|323258473|gb|EGA42145.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008283]
gi|323270962|gb|EGA54397.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008287]
Length = 227
Score = 105 bits (263), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 114/217 (52%), Gaps = 3/217 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
++I LF++ L VK I+ +L FSI SW++IIQ++ R+ FE FWSG L
Sbjct: 1 MNILDLFLKASLLVKLIMLILIGFSIASWAIIIQRTRILNAAAREAEAFEDKFWSGIELS 60
Query: 71 TVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ + + + G IF S E+ + + +P + + R M +++ RELE +
Sbjct: 61 RLYQESQGRRDSLSGSEQIFYSGFKEFVRLHRANSHAPEAVVEGASRAMRISMNRELETL 120
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLC 187
+ FLG++ S +G+ G V G+M F ++ + + PGI E+LI+ +GL
Sbjct: 121 ETHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMVAPGIAEALIATAIGLF 180
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+IP+ +AYN+ + K + + F EF+AIL RQ
Sbjct: 181 AAIPAVMAYNRLNQRVNKLELNYDNFMEEFTAILHRQ 217
>gi|304312898|ref|YP_003812496.1| TolQ-related transport transmembrane protein [gamma proteobacterium
HdN1]
gi|301798631|emb|CBL46863.1| TolQ-related transport transmembrane protein [gamma proteobacterium
HdN1]
Length = 249
Score = 105 bits (263), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 64/195 (32%), Positives = 99/195 (50%), Gaps = 3/195 (1%)
Query: 35 SILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNH--HNIGLAAIFMSAM 92
SI SW +I Q+ RR FE+ FWSG L + + N H G AIF +
Sbjct: 50 SISSWYIIWQRRSLLGESRRAAENFEERFWSGIDLSRLFVQVNNEPDHYSGHEAIFRAGF 109
Query: 93 SEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVL 152
E+ + G P I +R M VA+ +E E + LSFL ++ S +G+ G V
Sbjct: 110 KEFARLRKVGNAEPDSIMAGAERAMKVALLKEQERLEANLSFLATVGSVSPYIGLFGTVW 169
Query: 153 GMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
G+M F ++A + ++ PGI E+LI+ +GL +IP+ +A+N++ ++ E
Sbjct: 170 GIMHAFINLANQNQATLSAVAPGIAEALIATAIGLVAAIPAVVAFNRYTSLCERLLHNYE 229
Query: 212 GFANEFSAILSRQTE 226
FA+EFS IL R+
Sbjct: 230 TFADEFSGILHRKAH 244
>gi|262394687|ref|YP_003286541.1| MotA/TolQ/ExbB proton channel family protein [Vibrio sp. Ex25]
gi|262338281|gb|ACY52076.1| MotA/TolQ/ExbB proton channel family protein [Vibrio sp. Ex25]
Length = 211
Score = 105 bits (263), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 108/202 (53%), Gaps = 6/202 (2%)
Query: 27 IITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNI--GL 84
++TLL + SI+SW++II++S + +FE FWSG L + + +K + G
Sbjct: 1 MLTLLGM-SIVSWAMIIKRSKVLSQASKNAEQFEDKFWSGTDLSQLYQKVKARKDEIEGT 59
Query: 85 AAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLL 144
IF + +E+ + A SP I + R M VA++RE++E+ L FL ++ S
Sbjct: 60 EEIFYAGFTEFARLRKSNANSPAYIMEGTGRAMRVAVSREVDELETSLPFLATVGSISPY 119
Query: 145 VGILGAVLGMMGFFQSIAGYYSNNVVSI--PGIIESLISILLGLCVSIPSSIAYNKFIED 202
+G+ G V G+M F ++ G +S+ PGI E+LI+ +GL +IP+ +AYN+
Sbjct: 120 IGLFGTVWGIMHAFIAL-GEVKQATLSMVAPGIAEALIATAMGLFAAIPAVMAYNRLSNK 178
Query: 203 SKKFAMQMEGFANEFSAILSRQ 224
K F+ EF +IL RQ
Sbjct: 179 VSKLEHTYATFSEEFHSILHRQ 200
>gi|170717554|ref|YP_001783485.1| Tol-Pal system TolQ [Haemophilus somnus 2336]
gi|168825683|gb|ACA31054.1| Tol-Pal system TolQ [Haemophilus somnus 2336]
Length = 227
Score = 105 bits (263), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 116/222 (52%), Gaps = 5/222 (2%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
++ LF++ + V+ +I +L FSI+SW++IIQ+S + FE+ FWSG+ L
Sbjct: 4 ELDFLELFLKASIVVQIVIVILISFSIISWAIIIQRSRILTRALKDSTLFEERFWSGEDL 63
Query: 70 ETVCKSLKNHHNIGLAA---IFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
+ L N N GL + IF E+ + +P I R M++ + RE+E
Sbjct: 64 YKLYDGLSNRRN-GLNSSERIFYVGFKEFNRLKQANPDAPEAIIQGSSRAMNLTMNREVE 122
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLG 185
++ ++ FL +++S +G+ G V G+M F +++G + + PGI E+LI+ +G
Sbjct: 123 DLETRVPFLATVASISPYIGLFGTVWGIMHAFMALSGAKQATLQMVAPGIAEALIATAIG 182
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEG 227
L +IP+ +AYN+ K F +EF+ IL RQ G
Sbjct: 183 LFAAIPAVMAYNRLSLRVNKLEQNYANFIDEFTTILHRQAFG 224
>gi|157146638|ref|YP_001453957.1| colicin uptake protein TolQ [Citrobacter koseri ATCC BAA-895]
gi|157083843|gb|ABV13521.1| hypothetical protein CKO_02404 [Citrobacter koseri ATCC BAA-895]
Length = 227
Score = 105 bits (263), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 113/217 (52%), Gaps = 3/217 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
++I LF++ L VK I+ +L FSI SW++IIQ++ R+ FE FWSG L
Sbjct: 1 MNILDLFLKASLLVKLIMLILIGFSIASWAIIIQRTRILNAAAREAEAFEDKFWSGIELS 60
Query: 71 TVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ + + + G IF S E+ + +P + + R M +++ RELE +
Sbjct: 61 RLYQESQGRRDSLAGSEQIFYSGFKEFVRLHRANNHAPEAVVEGASRAMRISMNRELETL 120
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLC 187
+ FLG++ S +G+ G V G+M F ++ + + PGI E+LI+ +GL
Sbjct: 121 ETHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMVAPGIAEALIATAIGLF 180
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+IP+ +AYN+ + K + + F EF+AIL RQ
Sbjct: 181 AAIPAVMAYNRLNQRVNKLELNYDNFMEEFTAILHRQ 217
>gi|74318227|ref|YP_315967.1| MotA/TolQ/ExbB proton channel family protein [Thiobacillus
denitrificans ATCC 25259]
gi|74057722|gb|AAZ98162.1| MotA/TolQ/ExbB proton channel family [Thiobacillus denitrificans
ATCC 25259]
Length = 231
Score = 105 bits (263), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 107/221 (48%), Gaps = 9/221 (4%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFR---EFEQLFWSG 66
D+S+ L + L V+ ++ LL S++SW I + L+R R FE FW G
Sbjct: 8 DLSLLHLILNASLPVQIVMLLLLGASLMSWWYIF---IKMFALKRALRVTDRFEHEFWGG 64
Query: 67 QSLETVCKSLK--NHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARE 124
+ + + + + IF + E+ K + S I D R M + RE
Sbjct: 65 GDIHAMYERVAAGREEASEMERIFEAGFREFMKLRQQAGLSLNVIIDGTRRAMRASYQRE 124
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISIL 183
L+ + L+FL ++ S VG+ G V G+M FQ +A + + PGI E+LI+
Sbjct: 125 LDALESHLAFLATVGSVSPYVGLFGTVWGIMLAFQGLATVAQATLAQVAPGIAEALIATA 184
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+GL +IP+ + YN++ D + A +ME F EFS IL RQ
Sbjct: 185 MGLFAAIPAVVGYNRYTHDVDRLANRMESFMEEFSNILQRQ 225
>gi|148653364|ref|YP_001280457.1| Tol-Pal system, TolQ [Psychrobacter sp. PRwf-1]
gi|148572448|gb|ABQ94507.1| Tol-Pal system, TolQ [Psychrobacter sp. PRwf-1]
Length = 263
Score = 105 bits (262), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 116/218 (53%), Gaps = 5/218 (2%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
I++ AL + L V+ ++ +L + S++ W +I + S T +RQ + FE FWSG+ L
Sbjct: 22 INLIALITEASLLVQIVMAILLLASVICWVLIFRLSARLGTAKRQDQHFENWFWSGEDLS 81
Query: 71 TVCKSLKNHHN-IGLAAIFMSAMSEWKKSCDKGARSPIG-IQDRIDRMMDVAIARELEEI 128
+ + ++N + GLA IF SE+ + K R P I D ++R + V + R+ + +
Sbjct: 82 KLYQGIQNSPDRHGLANIFYVGFSEFLRMNKK--RQPKDHIIDGVERKLRVGLGRQQQSL 139
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLC 187
L+ L S+ S +G+ G V G+M F +A ++ ++ PGI E+LI+ +GL
Sbjct: 140 ESGLAVLASIGSVSPYIGLFGTVWGIMNAFLGLAQVEQVSLSAVAPGIAEALIATAMGLF 199
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ +AYN F + F +E + +L R+T
Sbjct: 200 AAIPAVLAYNHFTAKAAGIYDSRALFCDEMTGMLQRET 237
>gi|163854966|ref|YP_001629264.1| TolQ colicin import protein [Bordetella petrii DSM 12804]
gi|163258694|emb|CAP40993.1| TolQ colicin import protein [Bordetella petrii]
Length = 226
Score = 105 bits (262), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 115/221 (52%), Gaps = 4/221 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S+ +L + V+ I+ LL SILSW+ I K + Q R FE FWSG L
Sbjct: 6 DMSLLSLIAHASVPVQLIMLLLLGISILSWTYIFAKRLAIKRAHAQTRRFEDDFWSGGDL 65
Query: 70 ETVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIG-IQDRIDRMMDVAIARELE 126
+ +++ + + LA IF + M+E+ K+ I + D R M A RE++
Sbjct: 66 SMLQQAVASRRDEQGALARIFDAGMTEFLKARRTNVNGDINTLLDGPRRAMRAAYQREMD 125
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLG 185
+ L+FL S S +G+LG V G+M F ++ + S+ PGI E+LI+ +G
Sbjct: 126 SLESHLNFLASAGSVSPYIGLLGTVWGIMHAFIGLSNMQQATLASVAPGIAEALIATAIG 185
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
L +IP+ +AYN++ D + +++ + F +EF IL RQ
Sbjct: 186 LFAAIPAVVAYNRYTHDIDRLSIRFDSFVDEFLNILQRQVR 226
>gi|119504261|ref|ZP_01626341.1| Biopolymer transport protein [marine gamma proteobacterium
HTCC2080]
gi|119459769|gb|EAW40864.1| Biopolymer transport protein [marine gamma proteobacterium
HTCC2080]
Length = 235
Score = 105 bits (262), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 109/222 (49%), Gaps = 6/222 (2%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
++ I L + V+ ++ +L + S+ SW +I+Q+ + + + + FE FWSG L
Sbjct: 4 ELGILELIIGASGTVQVVMLILLLASVSSWYLIVQRVMLYRRMTEELGGFEAHFWSGVDL 63
Query: 70 ETVCKS-----LKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARE 124
+ + IG+ +IF + E+ + + + + R M VA RE
Sbjct: 64 AQIYREGNEALADGATPIGVESIFRAGFKEFSRLSQQSDIEADAVLEGARRAMRVATLRE 123
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISIL 183
+ + L FL S+ S +G+ G V G+M F+ +A + ++ PGI E+LI+
Sbjct: 124 SDRLESNLPFLASVGSTSPYIGLFGTVWGIMHSFRGLANATQATLATVAPGISEALIATA 183
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+GL +IP+ +AYN+F S + F +EFS IL RQT
Sbjct: 184 MGLFAAIPAVLAYNRFAARSDSLINHYDTFVDEFSGILQRQT 225
>gi|254469020|ref|ZP_05082426.1| protein TolQ [beta proteobacterium KB13]
gi|207087830|gb|EDZ65113.1| protein TolQ [beta proteobacterium KB13]
Length = 223
Score = 105 bits (261), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 105/211 (49%), Gaps = 4/211 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S +L M + V+ ++ +L S+ SW I K EFE+ FW+G
Sbjct: 6 DLSFLSLVMGASIPVQLVMLILIAASVFSWKYIFIKIKTIKNAEEHATEFEKYFWAGAQF 65
Query: 70 ETVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + +S + N GL +IF + E+ S K + ++ I R M VA REL+
Sbjct: 66 KQLYESASHSSNNVGGLKSIFFAGYKEFIAST-KDQKLDKQSKESIRRAMQVAYNRELDS 124
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ L FL S+ S +G+ G V G+M F ++ + + + PGI E+LI+ +GL
Sbjct: 125 LERHLPFLASVGSVSPYIGLFGTVWGIMNSFIGLSNVAQSTLAQVAPGIAEALIATAIGL 184
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEF 217
+IP+ IAYN+F + A++ E F EF
Sbjct: 185 FAAIPAVIAYNRFAAKVDRLAIRYESFMEEF 215
>gi|323163896|gb|EFZ49706.1| protein TolQ [Shigella sonnei 53G]
gi|323170858|gb|EFZ56508.1| protein TolQ [Escherichia coli LT-68]
gi|332768164|gb|EGJ98349.1| protein TolQ [Shigella flexneri 2930-71]
Length = 222
Score = 104 bits (260), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 111/212 (52%), Gaps = 3/212 (1%)
Query: 16 LFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKS 75
+F++ L VK I+ +L FSI SW++IIQ++ R+ FE FWSG L + +
Sbjct: 1 MFLKASLLVKLIMLILIGFSIASWAIIIQRTRILNAAAREAEAFEDKFWSGIELSRLYQE 60
Query: 76 LKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLS 133
+ + G IF S E+ + + +P + + R M +++ RELE + +
Sbjct: 61 SQGKRDNLTGSEQIFYSGFKEFVRLHRANSHAPEAVVEGASRAMRISMNRELENLETHIP 120
Query: 134 FLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCVSIPS 192
FLG++ S +G+ G V G+M F ++ + + PGI E+LI+ +GL +IP+
Sbjct: 121 FLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMVAPGIAEALIATAIGLFAAIPA 180
Query: 193 SIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+AYN+ + K + + F EF+AIL RQ
Sbjct: 181 VMAYNRLNQRVNKLELNYDNFMEEFTAILHRQ 212
>gi|288940687|ref|YP_003442927.1| protein TolQ [Allochromatium vinosum DSM 180]
gi|288896059|gb|ADC61895.1| protein TolQ [Allochromatium vinosum DSM 180]
Length = 224
Score = 104 bits (260), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 119/224 (53%), Gaps = 9/224 (4%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S+FAL + L V+ ++ +L + S++SW++I+ ++ R+ FE+ FWSG L
Sbjct: 4 DLSLFALILDASLVVQLVLLVLVVASVISWTMILDRTRVLGRARKLADRFEERFWSGGDL 63
Query: 70 ETVCKSLKNHHN--IGLAAIFMSAMSEW---KKSCDKGARSPIGIQDRIDRMMDVAIARE 124
+ K L GLA IF + E+ +K D S + +R M VA++RE
Sbjct: 64 GALYKELSQDEKGGQGLAVIFRAGFKEFVRLRKVEDTDMPS---VLQGAERSMRVALSRE 120
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISIL 183
++ + L+FL ++ S +G+ G V G+M F ++ + + PGI E+L++
Sbjct: 121 MDRLETNLAFLATVGSTSPYIGLFGTVWGIMQSFHALGNVEQATLALVAPGISEALVATA 180
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEG 227
+GL +IP+ IAYN++ ++ + E F EF+ +L RQ G
Sbjct: 181 IGLFAAIPAVIAYNRYSNQVERLNNRYEEFIEEFATLLQRQGRG 224
>gi|332534225|ref|ZP_08410070.1| inner membrane protein required for outer membrane integrity,
uptake of group A colicins and phage DNA
[Pseudoalteromonas haloplanktis ANT/505]
gi|332036305|gb|EGI72776.1| inner membrane protein required for outer membrane integrity,
uptake of group A colicins and phage DNA
[Pseudoalteromonas haloplanktis ANT/505]
Length = 234
Score = 104 bits (260), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 115/228 (50%), Gaps = 8/228 (3%)
Query: 5 GLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFW 64
GL +D L ++ L V+ ++ L S++SW++I Q+ ++FEQ FW
Sbjct: 4 GLNFLD-----LILEASLLVQLVMLGLVAMSVMSWTIIFQRKKAISDALINAKKFEQKFW 58
Query: 65 SGQSLETVCKSL--KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIA 122
SG L + + ++ + G+ A+F S E+ + +S + + R M VA++
Sbjct: 59 SGIDLSKLYNEISSRSGQSQGIEALFTSGFKEFARHKKNTFQSASIVMEGTHRSMRVALS 118
Query: 123 RELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLIS 181
RE+E++ LSFL ++ S +G+ G V G+M F ++ + + PGI E+LI+
Sbjct: 119 REIEKMESSLSFLATVGSISPYIGLFGTVWGIMNAFIALGEVKQATLQMVAPGIAEALIA 178
Query: 182 ILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNI 229
+GL +IP+ IAYN+F +K F EF+ IL RQ I
Sbjct: 179 TAMGLFAAIPAVIAYNRFSNSVEKLESHYINFMEEFANILHRQAATQI 226
>gi|148262289|ref|YP_001228995.1| MotA/TolQ/ExbB proton channel [Geobacter uraniireducens Rf4]
gi|146395789|gb|ABQ24422.1| Cell division and transport-associated protein TolQ [Geobacter
uraniireducens Rf4]
Length = 224
Score = 104 bits (260), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 106/223 (47%), Gaps = 11/223 (4%)
Query: 16 LFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKS 75
+F GL VK ++ +L FS++SW++I K + + F + FW + + +
Sbjct: 3 IFATTGLVVKLVLFILLYFSVVSWAIIFYKLLQVHRANSESERFLEFFWKAKRFDAINAQ 62
Query: 76 LKNHHNIGLAAIFMSAMSEWKKSCDKGAR--------SPIGIQDRIDRMMDVAIARELEE 127
L N L +F E KK +KG + +G D I R + A E+
Sbjct: 63 LDRFANSPLTVLFNEGYGEMKKLMEKGEEKQDPTIISTELGGIDNISRALRRATTSEITR 122
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLG 185
+ + L+FL + S +G+ G V G+M F+ I G S VV+ PGI E+LI+ +G
Sbjct: 123 LEKYLTFLATTGSTAPFIGLFGTVWGIMTAFKGIGETGSASLAVVA-PGIAEALIATAIG 181
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
L +IP+ + YN F + + +M+ F+ EF I+ R G
Sbjct: 182 LVAAIPAVMGYNHFQQKIRVLIAEMDSFSTEFLNIVQRTFTGK 224
>gi|153873820|ref|ZP_02002274.1| MotA/TolQ/ExbB proton channel [Beggiatoa sp. PS]
gi|152069718|gb|EDN67730.1| MotA/TolQ/ExbB proton channel [Beggiatoa sp. PS]
Length = 236
Score = 104 bits (260), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 102/194 (52%), Gaps = 4/194 (2%)
Query: 35 SILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSL--KNHHNIGLAAIFMSAM 92
SI SW++I +KS RR FE FW + L + + + G+A IF S
Sbjct: 30 SIYSWTLIFRKSRFLKRARRTSDHFEDRFWKFKDLNALYNRIVSEEEEPKGMANIFTSGY 89
Query: 93 SEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVL 152
E+ K + +P + + R M VA+ RE++E+ L+ L ++ S +G+ G V
Sbjct: 90 MEFVKLRKQPNITPTTLLEGSQRAMRVALHREMDELDANLATLATVGSVSPYIGLFGTVW 149
Query: 153 GMMGFFQSIAGYYSNNVVSI--PGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQM 210
G+M F ++ +++ PGI E+LI+ +GL +IP+ +AYN +++D + +
Sbjct: 150 GIMNSFHALGTMEQQVTLAMVAPGISEALIATAMGLFAAIPAVMAYNNYVDDVDRLITRY 209
Query: 211 EGFANEFSAILSRQ 224
+ F +EF++IL RQ
Sbjct: 210 DTFLDEFTSILQRQ 223
>gi|270156708|ref|ZP_06185365.1| protein TolQ [Legionella longbeachae D-4968]
gi|289164844|ref|YP_003454982.1| TolQ, involved in the tonB-independent uptake of proteins
[Legionella longbeachae NSW150]
gi|269988733|gb|EEZ94987.1| protein TolQ [Legionella longbeachae D-4968]
gi|288858017|emb|CBJ11877.1| putative TolQ, involved in the tonB-independent uptake of proteins
[Legionella longbeachae NSW150]
Length = 224
Score = 104 bits (260), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 116/222 (52%), Gaps = 9/222 (4%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLET 71
++ FMQ GL VK ++ LL SI SW++I Q++ F ++ F + FW L
Sbjct: 6 NVLMYFMQAGLVVKTVMLLLAAASITSWTLIFQRAWFFNQKKQLTDAFNRRFWESADLSR 65
Query: 72 VCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+ + ++ + G+AAIF S E+ ++ +G + + I R+M + A+E E++
Sbjct: 66 LYADVDSNSDERQGMAAIFHSGFREFIRARKQGNV----VIEPIQRVMQITHAKEAEKLE 121
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI--PGIIESLISILLGLC 187
L F S+ S VG+ G V G+M FQ++ G+ +++ PGI E+L++ LGL
Sbjct: 122 RHLPFFASVGSIAPYVGLFGTVWGIMTSFQAL-GHAQQATIAMVAPGISEALVATALGLF 180
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNI 229
+IP+ IAYN++ + + + F E +++ +Q +
Sbjct: 181 TAIPAVIAYNRYTTRANDLLNRFDLFQEELISLIEQQNNDTV 222
>gi|71892113|ref|YP_277845.1| hypothetical protein BPEN_345 [Candidatus Blochmannia
pennsylvanicus str. BPEN]
gi|71796219|gb|AAZ40970.1| TolQ [Candidatus Blochmannia pennsylvanicus str. BPEN]
Length = 249
Score = 104 bits (260), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 108/231 (46%), Gaps = 11/231 (4%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
++IF LF++ + V+ I +L FS+LSWS+I + + +R+ + FE FWSG L
Sbjct: 1 MNIFDLFLETNILVQISIFILIGFSVLSWSIIFHRIFVLSSAQRKLKVFENEFWSGIDLS 60
Query: 71 TVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
++ + H N G IF E+ K SP + R M AI EL+ +
Sbjct: 61 SLYQKAAAHRNKLNGAEQIFYVGFKEFSKLYQTKHCSPETMMSRTLDSMHTAINTELKSL 120
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI---------PGIIESL 179
+ + +G++ S +G+ G VLG++ F + + N V+ PGI ESL
Sbjct: 121 EDYIPLIGTIGSISPYLGLFGTVLGIIHVFIELGKTTATNNVATQMIHMQIVAPGIAESL 180
Query: 180 ISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
IS +GL V+IP+ IA+N F EF IL Q NI
Sbjct: 181 ISTAIGLFVAIPAVIAFNYLTTQINNMDQDYHNFIEEFITILYHQIFFNID 231
>gi|88810555|ref|ZP_01125812.1| MotA/TolQ/ExbB proton channel [Nitrococcus mobilis Nb-231]
gi|88792185|gb|EAR23295.1| MotA/TolQ/ExbB proton channel [Nitrococcus mobilis Nb-231]
Length = 234
Score = 104 bits (260), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 111/220 (50%), Gaps = 4/220 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+SI L + L V+ ++ +L SI SW++I +K + FE FWSG +L
Sbjct: 4 DLSIAGLVLNASLIVQFVLLILLGASISSWTLIFRKWQTIGQAQSGANAFEDRFWSGGNL 63
Query: 70 ETVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + H GL IF + E+ + +G+ +P + D R M V++ RE++
Sbjct: 64 AEIYAQVSQPHEQAGGLERIFRAGFREFTRMRKQGS-NPESVVDASHRAMRVSLQREIDI 122
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ + FL ++ S +G+ G V G+M F ++ + ++ PGI E+L++ +GL
Sbjct: 123 LESYVPFLATVGSTSPYIGLFGTVWGIMNAFLALGNMQQATLTTVAPGIAEALVATAMGL 182
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ IAYN++ ++ E F EF++IL R
Sbjct: 183 FAAIPAVIAYNRYASQIERLTNHYEIFMEEFASILQRHVH 222
>gi|145588466|ref|YP_001155063.1| MotA/TolQ/ExbB proton channel [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
gi|145046872|gb|ABP33499.1| Cell division and transport-associated protein TolQ
[Polynucleobacter necessarius subsp. asymbioticus
QLW-P1DMWA-1]
Length = 218
Score = 103 bits (258), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 115/221 (52%), Gaps = 12/221 (5%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S +L + L V+ ++ LL S+ SW++I +K+ +R+ FE+ FWSG L
Sbjct: 6 DLSFLSLVLNASLLVQLVMLLLLGMSVASWTIIFKKTAVLRGVRQDTERFERDFWSGGDL 65
Query: 70 ETVCKSLKNH--HNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
T+ ++ + + + L IF + M E+ K + D R M RE++
Sbjct: 66 NTLLEAAQRNTRSDAVLEHIFEAGMQEFMKVHEI---------DAARRAMKATYQREMDT 116
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ L FL S+ S +G+ G V G+M F+ +A + + ++ PGI E+LI+ +GL
Sbjct: 117 LEANLPFLASVGSVSPYIGLFGTVWGIMHSFRGLANVQNATLSAVAPGIAEALIATAIGL 176
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEG 227
+IP+ +AYN+ D + +++ E F EF+ IL RQ G
Sbjct: 177 FAAIPAVVAYNRAATDVDRLSIRFETFIEEFTNILQRQNSG 217
>gi|332286929|ref|YP_004418840.1| putative TolQ-like translocation protein [Pusillimonas sp. T7-7]
gi|330430882|gb|AEC22216.1| putative TolQ-like translocation protein [Pusillimonas sp. T7-7]
Length = 224
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 108/208 (51%), Gaps = 4/208 (1%)
Query: 22 LAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSL--KNH 79
+ V+ ++ +L SILSW+ I K Q R FE FW+G L + +++ +
Sbjct: 18 VPVQFVMLVLLGISILSWAYIFSKRAALKRANEQTRRFEDDFWAGGDLSVLQQAIATRRA 77
Query: 80 HNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMS 139
+ LA IF + M+E+ K + + + + D R M RE++ + L+FL S
Sbjct: 78 EHGALARIFDAGMTEFIK-ARRNSSNGDAVLDGPRRAMRATYQREMDSLESHLNFLASAG 136
Query: 140 SAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCVSIPSSIAYNK 198
S +G+LG V G+M F ++ + ++ PGI E+LI+ +GL +IP+ IAYN+
Sbjct: 137 SVSPYIGLLGTVWGIMHAFIGLSSMQQATLSAVAPGIAEALIATAIGLFAAIPAVIAYNR 196
Query: 199 FIEDSKKFAMQMEGFANEFSAILSRQTE 226
+ + + +++ + F +EF IL RQ
Sbjct: 197 YTNEIDRLSIRFDSFIDEFLNILQRQVR 224
>gi|325981321|ref|YP_004293723.1| protein TolQ [Nitrosomonas sp. AL212]
gi|325530840|gb|ADZ25561.1| protein TolQ [Nitrosomonas sp. AL212]
Length = 226
Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 110/226 (48%), Gaps = 15/226 (6%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S L L V+ ++ +L + S SW I +K +R+ +FE +FW G L
Sbjct: 8 DMSFLYLISSASLLVQLVMLILVLISFFSWWFIFRKLFVIRNEKRKTDDFEDIFWRGVDL 67
Query: 70 ETVCKSLKN--HHNIGLAAIFMSAMSEWKKSCDKGARSPIG-----IQDRIDRMMDVAIA 122
+ + + + + + L IF + E+ K P G + + R M
Sbjct: 68 NALHQRITSARYDSGSLERIFAAGFGEFNKH-------PAGSDLDAVMESTRRAMRATYQ 120
Query: 123 RELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLIS 181
RE++ + LSFL ++ S +G+LG V G+M F+S++ + + PGI E+LI+
Sbjct: 121 REMDYLESHLSFLATVGSVSPYIGLLGTVWGIMNSFRSLSSVTQATIAHVAPGIAEALIA 180
Query: 182 ILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEG 227
+GL +IP+ +AYN++ + + A + E F E S +L R+ G
Sbjct: 181 TAMGLFAAIPAVVAYNRYASSTDQLATRFESFMEELSNVLQRRAAG 226
>gi|34496006|ref|NP_900221.1| tolQ-related transport transmembrane protein [Chromobacterium
violaceum ATCC 12472]
gi|34101859|gb|AAQ58227.1| tolQ-related transport transmembrane protein [Chromobacterium
violaceum ATCC 12472]
Length = 222
Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/219 (32%), Positives = 113/219 (51%), Gaps = 10/219 (4%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL- 69
IS +L + L V+ ++ L + S+LSW++I K + +R EFE+ FWSG L
Sbjct: 4 ISFISLILNASLLVQLVMAGLALTSLLSWALIFNKISVLRSAKRHSEEFERNFWSGADLN 63
Query: 70 ---ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
E VC+ +G+ IF S +E+ K + I D R M A REL+
Sbjct: 64 RLYEDVCR---RSDTVGMERIFQSGFAEFLKLRGRSGAELSDIMDGSRRAMRAAAQRELD 120
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILL 184
+ SFL ++ S +G+ G V G+M F + AG + + V+ PGI E+L++ +
Sbjct: 121 ALDSHTSFLATVGSVSPYIGLFGTVWGIMHAFIGLGNAGQATLSTVA-PGIAEALVATAI 179
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
GL +IP+ +AYN+F D + A + + + EFS IL R
Sbjct: 180 GLFAAIPAVVAYNRFATDVDRLATRFDTYMEEFSNILQR 218
>gi|329848727|ref|ZP_08263755.1| protein TolQ [Asticcacaulis biprosthecum C19]
gi|328843790|gb|EGF93359.1| protein TolQ [Asticcacaulis biprosthecum C19]
Length = 234
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 112/212 (52%), Gaps = 3/212 (1%)
Query: 16 LFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKS 75
LFM L VK ++ +L S+ SW++I+QKS++ + ++ FE SG++L+ + +
Sbjct: 16 LFMNADLVVKVVMIVLVFSSLWSWAIIVQKSLSLGKINKEADTFESALGSGRALDDIAAA 75
Query: 76 LKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIG--IQDRIDRMMDVAIARELEEITEKLS 133
L H + ++ S W+ K G + ++DR M + E + + + LS
Sbjct: 76 LGPHPKEPFQKLLVTVTSAWRDYKGKPMNPTQGELLMAQVDREMSHIVTSEADSVEDGLS 135
Query: 134 FLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCVSIPS 192
L +++A +G+ G V G+M F +IA N+ ++ P I E+L + +GL +IP+
Sbjct: 136 ILAVIATATPFLGLFGTVWGIMNAFSAIAAQGDTNLATVAPAISEALFATAMGLFAAIPA 195
Query: 193 SIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+A+N F +FA +ME FA+E L+R+
Sbjct: 196 YVAFNLFNAKVSRFASRMESFADELMVSLTRR 227
>gi|238897407|ref|YP_002923084.1| inner membrane protein [Candidatus Hamiltonella defensa 5AT
(Acyrthosiphon pisum)]
gi|229465161|gb|ACQ66935.1| inner membrane protein [Candidatus Hamiltonella defensa 5AT
(Acyrthosiphon pisum)]
Length = 236
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 111/224 (49%), Gaps = 17/224 (7%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+SI LF++ VK II++L FSI SW++I++K+ + + FE FWSG L
Sbjct: 1 MSILDLFLKASFLVKGIISILICFSIFSWAIILKKTSILRSATKAANAFENRFWSGIELS 60
Query: 71 TVCKSLKNHHNI--GLAAIFMSAMSEW-------KKSCDKGARSPIGIQDRIDRMMDVAI 121
+ + + + G IF S E+ C+ + R M +++
Sbjct: 61 RLYQQSDDRRDKLSGSEQIFYSGFKEFVRLHRAHHHVCESAVKGA-------ARAMRISM 113
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLI 180
RELE + + FLG++ S +G+ G V G+M F ++ + + PGI E+LI
Sbjct: 114 NRELEALETHVPFLGTIGSISPYIGLFGTVWGIMHSFIALGAAKQATLQMVAPGIAEALI 173
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+ +GL +IP+ +AYN+F ++ K + F EF AIL R+
Sbjct: 174 ATAIGLFSAIPAVMAYNRFNQNINKIEQNYDNFVEEFIAILHRE 217
>gi|171463100|ref|YP_001797213.1| protein TolQ [Polynucleobacter necessarius subsp. necessarius
STIR1]
gi|171192638|gb|ACB43599.1| protein TolQ [Polynucleobacter necessarius subsp. necessarius
STIR1]
Length = 218
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 115/222 (51%), Gaps = 14/222 (6%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S L + L V+ +I LL S+ SW++I +K+ +R+ FE+ FW+G L
Sbjct: 6 DLSFLPLVLNASLLVQLVILLLLSMSVASWTIIFKKTAVLRGVRQDTERFERDFWAGGDL 65
Query: 70 ETVCKSLKNH--HNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
T+ ++ + + + L IF + M E+ K + D R M A RE++
Sbjct: 66 NTLLEAAQRNTRSDAVLEHIFEAGMQEFTKGREI---------DAARRAMKAAYQREMDL 116
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI--PGIIESLISILLG 185
+ L FL S+ S +G+ G V G+M F+ +A N ++S PGI E+LI+ +G
Sbjct: 117 LEANLPFLASVGSVSPYIGLFGTVWGIMHSFRGLANV-QNAILSAVAPGIAEALIATAIG 175
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEG 227
L +IP+ +AYN+ D + +++ E F EF+ IL QT G
Sbjct: 176 LFAAIPAVVAYNRAATDVDRLSIRFETFIEEFTNILQHQTAG 217
>gi|297568865|ref|YP_003690209.1| protein TolQ [Desulfurivibrio alkaliphilus AHT2]
gi|296924780|gb|ADH85590.1| protein TolQ [Desulfurivibrio alkaliphilus AHT2]
Length = 234
Score = 102 bits (255), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 113/223 (50%), Gaps = 10/223 (4%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
M++++F +F++ G +K +I LL + S+ SW ++ QK + + +R+ EF++ FW ++
Sbjct: 1 MELNVFTMFLEAGPTIKAVILLLLVMSLYSWFIVFQKEILYRKVRQASEEFKEQFWKCRN 60
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAR----- 123
L K+ K A IF +A E +K +K + ++ R+ M + A
Sbjct: 61 LAEAHKTAKQAELAPEAMIFRAAYQELQK-LNKAQGGELRLEQRLAGMEPLKRAAGKARD 119
Query: 124 -ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA--GYYSNNVVSIPGIIESLI 180
E+ ++ L FL S SA +G+ G V G+M F I G S VV+ PGI E+L+
Sbjct: 120 GEIAQLASSLPFLASTGSASPFIGLFGTVWGIMTAFHEIGVRGSASLAVVA-PGISEALV 178
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
+GL V+IP+ + YN + + + F +F ++ R
Sbjct: 179 VTAMGLAVAIPAVVFYNYYTNRLAQIEDNSQAFVTDFINLIER 221
>gi|332974346|gb|EGK11276.1| TolQ colicin import protein [Psychrobacter sp. 1501(2011)]
Length = 246
Score = 102 bits (255), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 115/219 (52%), Gaps = 5/219 (2%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
I++ +L L V+ ++ +L + S+L W +I + S T +RQ + FE FWSG+ L
Sbjct: 8 INLISLVTNASLLVQVVMGILLLASVLCWVLIFRLSARLGTAKRQDQHFENWFWSGEDLA 67
Query: 71 TVCKSLKNHHN-IGLAAIFMSAMSEWKKSCDKGARSPIG-IQDRIDRMMDVAIARELEEI 128
+ + ++N + GLA IF SE+ + K R P I D ++R + V + R+ + +
Sbjct: 68 KMYQGIQNSPDRHGLANIFYVGFSEFLRMNKK--RQPKDHIIDGVERKLRVGLGRQQQSL 125
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLC 187
L+ L S+ S +G+ G V G+M F ++ ++ ++ PGI E+LI+ +GL
Sbjct: 126 ESGLAVLASIGSVSPYIGLFGTVWGIMNAFIGLSEASQVSLSAVAPGIAEALIATAMGLF 185
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ +AYN F + F +E + +L R+T
Sbjct: 186 AAIPAVLAYNHFTAKAAGIYDSRALFCDEMTGMLQRETH 224
>gi|103485826|ref|YP_615387.1| MotA/TolQ/ExbB proton channel [Sphingopyxis alaskensis RB2256]
gi|98975903|gb|ABF52054.1| MotA/TolQ/ExbB proton channel [Sphingopyxis alaskensis RB2256]
Length = 232
Score = 102 bits (255), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 108/217 (49%), Gaps = 2/217 (0%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+S ALF+Q + VK ++ L SI W+VI L R FE+ FW +++
Sbjct: 14 LSPVALFLQADIIVKAVMIGLLAASIYVWAVIFTHGRGVGKLMRASERFERDFWRADNID 73
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
+ A + + + EW++S G ++R+ M+ AIA E++ + E
Sbjct: 74 RFFDK-NGAEELPSAKVLSAGIGEWRRSTKGKVIDRDGTRERLGIAMNSAIAGEIDRLAE 132
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVS 189
K+ L ++ + VG+ G V G+M F +IA ++++ V PGI E+L + +GL +
Sbjct: 133 KIGTLATIGAVAPFVGLFGTVWGIMRSFTAIAAENNSSLAVVAPGIAEALFATAIGLFAA 192
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
IP+ IAYN F + + ++ FA+ A SR+ E
Sbjct: 193 IPAVIAYNAFSQRLNRLESRLGRFADGLHATFSRELE 229
>gi|285019186|ref|YP_003376897.1| biopolymer transport tolq transmembrane protein [Xanthomonas
albilineans GPE PC73]
gi|283474404|emb|CBA16905.1| probable biopolymer transport tolq transmembrane protein
[Xanthomonas albilineans]
Length = 258
Score = 102 bits (254), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 74/226 (32%), Positives = 118/226 (52%), Gaps = 12/226 (5%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
I+ L ++ L VK I+ LL + S++SW +I +K F R+ FE FWSG L
Sbjct: 37 INYLDLMVKASLPVKVIVLLLLLGSLISWVIIFRKGRVFKQANREADAFENRFWSGADLS 96
Query: 71 TVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDK---GARSPI-GIQDRIDRMMDVAIARE 124
+ + + + GL AIF + E+ + DK AR + G Q R M ARE
Sbjct: 97 KLYAGATDRNRVVGGLEAIFEAGFREFARLRDKRHLDARIQLEGAQ----RAMRATYARE 152
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISI 182
++ + L L +++S VG++G V G+M + +G + PGI E+L +
Sbjct: 153 VDRLERNLELLANIASNAPYVGLVGTVFGIMVTMHDMINSGQQAGIAAVAPGISEALFAT 212
Query: 183 LLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
+GL V+IP++ AYN+F ++ A++ E F+ EFS+IL RQ G+
Sbjct: 213 AIGLFVAIPAAWAYNRFSTRVERLAVRFETFSEEFSSILQRQASGD 258
>gi|126668396|ref|ZP_01739353.1| Biopolymer transport protein [Marinobacter sp. ELB17]
gi|126627105|gb|EAZ97745.1| Biopolymer transport protein [Marinobacter sp. ELB17]
Length = 229
Score = 102 bits (254), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 115/218 (52%), Gaps = 4/218 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
+IS++ L G+ V+ ++ LL + S+ SW++I+Q+ F ++ FE+ FWSG L
Sbjct: 4 EISVWYLISNAGVLVQLVMLLLLLASVASWALILQRVQVFRKAQQSRLAFEERFWSGMDL 63
Query: 70 ETVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + + G+ +IF + E+ + + + + + R M VA +RE E
Sbjct: 64 GQLYREVAAEPTPFSGMESIFRAGFREFSR-LRQQSHDADAVMNGAQRAMRVAFSREQER 122
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ L FL ++ S VG+ G V G+M F+ +A + ++ PGI E+LI+ +GL
Sbjct: 123 LEISLPFLATVGSTSPYVGLFGTVWGIMNSFRGLAQVQQATLATVAPGISEALIATAMGL 182
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+IP+ IAYN+F S E FA EFS+IL R+
Sbjct: 183 FAAIPAVIAYNRFAARSDALLKNYETFAEEFSSILHRR 220
>gi|183598185|ref|ZP_02959678.1| hypothetical protein PROSTU_01563 [Providencia stuartii ATCC 25827]
gi|188020351|gb|EDU58391.1| hypothetical protein PROSTU_01563 [Providencia stuartii ATCC 25827]
Length = 227
Score = 102 bits (254), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 111/219 (50%), Gaps = 3/219 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D++I LF++ L V+ I+ +L FSI SW++IIQ++ R+ FE FWSG L
Sbjct: 3 DMNIVDLFLKASLLVQIIMFVLIGFSIASWAIIIQRTKILNAAAREAEAFEDKFWSGIEL 62
Query: 70 ETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ K + + G IF + E+ + +P + R M +++ RELE
Sbjct: 63 SRLYKESQARRDSLSGAEQIFHAGFKEFVRLHQANIHAPDAVVTGASRAMRISMNRELES 122
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ + FLG++ S +G+ G V G+M F ++ + + PGI E+LI+ +GL
Sbjct: 123 VEAHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMVAPGIAEALIATAIGL 182
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ +AYN+ + K + F EF AIL RQ
Sbjct: 183 FAAIPAVMAYNRLNQRVNKLEQSYDNFMEEFLAILHRQA 221
>gi|118581726|ref|YP_902976.1| MotA/TolQ/ExbB proton channel [Pelobacter propionicus DSM 2379]
gi|118504436|gb|ABL00919.1| Cell division and transport-associated protein TolQ [Pelobacter
propionicus DSM 2379]
Length = 223
Score = 102 bits (254), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 108/221 (48%), Gaps = 8/221 (3%)
Query: 15 ALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCK 74
AL + G+ VK ++ LL FS++SW++I+ K R+ F LFW +T+
Sbjct: 2 ALLLNAGIVVKLVLILLLFFSVVSWAIILFKLFQVHRANRESERFMDLFWKSSRFDTIAS 61
Query: 75 SLKNHHNIGLAAIFMSAMSEWKKSCDKGARS-------PIGIQDRIDRMMDVAIARELEE 127
L + L+ +F A +E K DKGA S +G + + R + A EL
Sbjct: 62 QLDRFSSSPLSVLFNEAYAELNKLMDKGATSNGGGLSTDLGGIENVSRALRRATNSELTR 121
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
+ L+FL + S +G+ G V G+M F+ I S ++ V PGI E+LI+ +GL
Sbjct: 122 LERYLTFLATTGSTSPFIGLFGTVWGIMTAFEGIGRTGSASLAVVAPGIAEALIATAIGL 181
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEG 227
+IP+ +AYN F + M+ F+ EF I+ R G
Sbjct: 182 VAAIPAVMAYNHFQHKIRVLTNDMDSFSTEFLNIVQRTVAG 222
>gi|118579668|ref|YP_900918.1| MotA/TolQ/ExbB proton channel [Pelobacter propionicus DSM 2379]
gi|118502378|gb|ABK98860.1| Cell division and transport-associated protein TolQ [Pelobacter
propionicus DSM 2379]
Length = 223
Score = 102 bits (254), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 108/221 (48%), Gaps = 8/221 (3%)
Query: 15 ALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCK 74
AL + G+ VK ++ LL FS++SW++I+ K R+ F LFW +T+
Sbjct: 2 ALLLNAGVVVKLVLILLLFFSVVSWAIILFKLFQVHRANRESERFMDLFWKSSRFDTIAS 61
Query: 75 SLKNHHNIGLAAIFMSAMSEWKKSCDKGARS-------PIGIQDRIDRMMDVAIARELEE 127
L + L+ +F A +E K DKGA S +G + + R + A EL
Sbjct: 62 QLDRFSSSPLSVLFNEAYAELNKLMDKGATSSGTGLSTDLGGIENVSRALRRATNSELTR 121
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
+ L+FL + S +G+ G V G+M F+ I S ++ V PGI E+LI+ +GL
Sbjct: 122 LERYLTFLATTGSTSPFIGLFGTVWGIMTAFEGIGRTGSASLAVVAPGIAEALIATAIGL 181
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEG 227
+IP+ +AYN F + M+ F+ EF I+ R G
Sbjct: 182 VAAIPAVMAYNHFQHKIRVLTNDMDSFSTEFLNIVQRTVAG 222
>gi|152979451|ref|YP_001345080.1| Tol-Pal system TolQ [Actinobacillus succinogenes 130Z]
gi|150841174|gb|ABR75145.1| Tol-Pal system TolQ [Actinobacillus succinogenes 130Z]
Length = 228
Score = 102 bits (254), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 114/219 (52%), Gaps = 4/219 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
+++ LF++ + V+ +I +L FSI+SW++IIQ+S + FE FWSG+ L
Sbjct: 4 ELNFLDLFLKASIVVQIVILILISFSIISWAIIIQRSRILTQALKDSMAFEDRFWSGEDL 63
Query: 70 ETVCKSLKNHHN---IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
+ L N + G IF E+ + A +P I R M++A+ RE+E
Sbjct: 64 TKLYDGLSNRRDGMMSGSEQIFYVGFKEFSRLKQVNAEAPEAIIKGSTRAMNLAMNREVE 123
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLG 185
+ ++ FL +++S +G+ G V G+M F +++G + + PGI E+LI+ +G
Sbjct: 124 TLESRIPFLATVASVSPYIGLFGTVWGIMHAFMALSGAKQATLQMVAPGIAEALIATAIG 183
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
L +IP+ +AYN+ K F +EF+ IL RQ
Sbjct: 184 LFAAIPAVMAYNRLSLRVNKLEQNYGNFIDEFTTILQRQ 222
>gi|229515219|ref|ZP_04404679.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae TMA
21]
gi|229347924|gb|EEO12883.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae TMA
21]
Length = 208
Score = 102 bits (253), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 103/202 (50%), Gaps = 4/202 (1%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHN--IG 83
++TLL + S+ SW+ II++S R+ FE FWSG L ++ + +K + G
Sbjct: 2 VMLTLLGM-SVASWAAIIKRSKVISAAEREADTFEDRFWSGMDLGSLYQDVKKRKDDIYG 60
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
+ IF + +E+ + +P + + R M VA+ARE++ + L FL ++ S
Sbjct: 61 IEEIFYAGFTEFARLRKTNPGAPDFVMEGTGRAMRVAVAREVDSLETSLPFLATVGSISP 120
Query: 144 LVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCVSIPSSIAYNKFIED 202
+G+ G V G+M F ++ + + PGI E+LI+ +GL +IP+ +AYN+
Sbjct: 121 YIGLFGTVWGIMHAFIALGEVKQATLAMVAPGIAEALIATAIGLFAAIPAVMAYNRLSNK 180
Query: 203 SKKFAMQMEGFANEFSAILSRQ 224
K F+ EF IL RQ
Sbjct: 181 VSKLEHTYATFSEEFHTILHRQ 202
>gi|90580124|ref|ZP_01235932.1| Putative TolQ protein [Vibrio angustum S14]
gi|90439009|gb|EAS64192.1| Putative TolQ protein [Vibrio angustum S14]
Length = 229
Score = 102 bits (253), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 109/218 (50%), Gaps = 3/218 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
++++ + + G ++ +L SI SW++II++S R+ +FE FWSG L
Sbjct: 4 ELTVLDIILNSGALEIMVMLILLGMSIASWTMIIKRSQVLSEASRKATQFEDRFWSGIDL 63
Query: 70 ETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ K ++ + G IF S E+ + + P + + R M V++++E++E
Sbjct: 64 SQLYKEVQARKDDLTGSEQIFYSGFKEFARLHRSNDKVPEAVMEGTSRAMRVSLSKEVDE 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ L FL ++ S +G+ G VLG+M F ++ + ++ PGI +LI+ +GL
Sbjct: 124 LETNLPFLATVGSISPYIGLFGTVLGIMTAFIALGAMKQPTLATVAPGIAGALIATAMGL 183
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+IP+ + YN+ K F EFS+IL RQ
Sbjct: 184 FAAIPAVMFYNRLTNKVSKLEHTYATFMEEFSSILHRQ 221
>gi|328953810|ref|YP_004371144.1| protein TolQ [Desulfobacca acetoxidans DSM 11109]
gi|328454134|gb|AEB09963.1| protein TolQ [Desulfobacca acetoxidans DSM 11109]
Length = 263
Score = 101 bits (252), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 113/232 (48%), Gaps = 16/232 (6%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
+ D+ + L + G VK ++ +L +FS+ W +I K ++Q EF LFW +
Sbjct: 23 VSDLDVVPLILNAGPVVKGVMFILLVFSVACWGIIFAKVFQLSRAKKQTAEFLDLFWGAR 82
Query: 68 SLETVCKSLKNHHNIGLAAIF------MSAMSEWKKSCDKGARSPIGI-------QDRID 114
+L T ++ +AAIF + + + + S D G R +G + ++
Sbjct: 83 NLSTAYHETRHLQASPVAAIFRLGYIELGKLMQTQVSTDSGDRDVLGTIAVRGAGVENVN 142
Query: 115 RMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA--GYYSNNVVSI 172
R + A+ E ++ ++FL + + +G+ G V G+M F+ I G S VV+
Sbjct: 143 RSLRRAMNTETTRLSRAITFLATTGNTAPFIGLFGTVWGIMTSFRGIGLKGSASLAVVA- 201
Query: 173 PGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
PGI E+L++ +GL +IP+ +AYN F+ + +M F ++F I+ R
Sbjct: 202 PGISEALVATAVGLAAAIPAVVAYNYFLSKVRVLETEMASFISDFLNIIERD 253
>gi|229508064|ref|ZP_04397569.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae BX
330286]
gi|229511697|ref|ZP_04401176.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae B33]
gi|229518836|ref|ZP_04408279.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae RC9]
gi|229607625|ref|YP_002878273.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae
MJ-1236]
gi|229343525|gb|EEO08500.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae RC9]
gi|229351662|gb|EEO16603.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae B33]
gi|229355569|gb|EEO20490.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae BX
330286]
gi|229370280|gb|ACQ60703.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae
MJ-1236]
Length = 208
Score = 101 bits (252), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 102/202 (50%), Gaps = 4/202 (1%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHN--IG 83
++TLL + S+ SW+ II++S R+ FE FWSG L + + +K + G
Sbjct: 2 VMLTLLGM-SVASWAAIIKRSKVISAAEREADTFEDRFWSGMDLGALYQDVKKRKDDIYG 60
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
+ IF + +E+ + +P + + R M VA+ARE++ + L FL ++ S
Sbjct: 61 IEEIFYAGFTEFARLRKTNPGAPDFVMEGTGRAMRVAVAREVDSLETSLPFLATVGSISP 120
Query: 144 LVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCVSIPSSIAYNKFIED 202
+G+ G V G+M F ++ + + PGI E+LI+ +GL +IP+ +AYN+
Sbjct: 121 YIGLFGTVWGIMHAFIALGEVKQATLAMVAPGIAEALIATAIGLFAAIPAVMAYNRLSNK 180
Query: 203 SKKFAMQMEGFANEFSAILSRQ 224
K F+ EF IL RQ
Sbjct: 181 VSKLEHTYATFSEEFHTILHRQ 202
>gi|153214280|ref|ZP_01949297.1| tolQ protein [Vibrio cholerae 1587]
gi|229520299|ref|ZP_04409725.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae TM
11079-80]
gi|229523857|ref|ZP_04413262.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae bv.
albensis VL426]
gi|229529138|ref|ZP_04418528.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae
12129(1)]
gi|124115428|gb|EAY34248.1| tolQ protein [Vibrio cholerae 1587]
gi|229332912|gb|EEN98398.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae
12129(1)]
gi|229337438|gb|EEO02455.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae bv.
albensis VL426]
gi|229342665|gb|EEO07657.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae TM
11079-80]
Length = 208
Score = 101 bits (252), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 102/202 (50%), Gaps = 4/202 (1%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHN--IG 83
++TLL + S+ SW+ II++S R+ FE FWSG L + + +K + G
Sbjct: 2 VMLTLLGM-SVASWAAIIKRSKVISAAEREADTFEDRFWSGMDLGALYQDVKKRKDDIYG 60
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
+ IF + +E+ + +P + + R M VA+ARE++ + L FL ++ S
Sbjct: 61 IEEIFYAGFTEFARLRKTNPGAPDFVMEGTGRAMRVAVAREVDSLETSLPFLATVGSISP 120
Query: 144 LVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCVSIPSSIAYNKFIED 202
+G+ G V G+M F ++ + + PGI E+LI+ +GL +IP+ +AYN+
Sbjct: 121 YIGLFGTVWGIMHAFIALGEVKQATLAMVAPGIAEALIATAIGLFAAIPAVMAYNRLSNK 180
Query: 203 SKKFAMQMEGFANEFSAILSRQ 224
K F+ EF IL RQ
Sbjct: 181 VSKLEHTYATFSEEFHTILHRQ 202
>gi|315498696|ref|YP_004087500.1| mota/tolq/exbb proton channel [Asticcacaulis excentricus CB 48]
gi|315416708|gb|ADU13349.1| MotA/TolQ/ExbB proton channel [Asticcacaulis excentricus CB 48]
Length = 234
Score = 101 bits (252), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 115/227 (50%), Gaps = 3/227 (1%)
Query: 7 AIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG 66
A +S LF++ VK ++ LL + S+ SW++II+K L ++ FE +G
Sbjct: 6 AAESLSFIDLFLRADWVVKGVMLLLALGSLWSWAIIIEKGFKLAKLNKEAAGFEAELAAG 65
Query: 67 QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIG--IQDRIDRMMDVAIARE 124
++LE + + ++ S W + K +P G + R+DR ++ I+ E
Sbjct: 66 RALEDIAAKHGTQPTAPFPKLLVTVTSAWGEYKGKSISAPEGELLLSRVDRELNHVISTE 125
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISIL 183
+ + + LS L +++A +G+ G V G+M F +IA N+ ++ P I E+L +
Sbjct: 126 ADVMEDGLSLLAVVATAAPFIGLFGTVWGIMNAFSAIASQGDTNLATVAPAISEALFATA 185
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
+GL +IP+ I +N + +F ++EGFA+E ++ + G ++
Sbjct: 186 IGLGAAIPAYIFFNLYNAKVARFVGRLEGFADELMVSVTGRLGGKLA 232
>gi|153824285|ref|ZP_01976952.1| protein TolQ [Vibrio cholerae B33]
gi|126518191|gb|EAZ75416.1| protein TolQ [Vibrio cholerae B33]
Length = 200
Score = 101 bits (251), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 102/201 (50%), Gaps = 4/201 (1%)
Query: 27 IITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHN--IGL 84
++TLL + S+ SW+ II++S R+ FE FWSG L + + +K + G+
Sbjct: 1 MLTLLGM-SVASWAAIIKRSKVISAAEREADTFEDRFWSGMDLGALYQDVKKRKDDIYGI 59
Query: 85 AAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLL 144
IF + +E+ + +P + + R M VA+ARE++ + L FL ++ S
Sbjct: 60 EEIFYAGFTEFARLRKTNPGAPDFVMEGTGRAMRVAVAREVDSLETSLPFLATVGSISPY 119
Query: 145 VGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCVSIPSSIAYNKFIEDS 203
+G+ G V G+M F ++ + + PGI E+LI+ +GL +IP+ +AYN+
Sbjct: 120 IGLFGTVWGIMHAFIALGEVKQATLAMVAPGIAEALIATAIGLFAAIPAVMAYNRLSNKV 179
Query: 204 KKFAMQMEGFANEFSAILSRQ 224
K F+ EF IL RQ
Sbjct: 180 SKLEHTYATFSEEFHTILHRQ 200
>gi|327480559|gb|AEA83869.1| tolQ protein [Pseudomonas stutzeri DSM 4166]
Length = 237
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 110/219 (50%), Gaps = 4/219 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
+S++ L + L V+ ++ +L + S+ SW +II++S R R F+Q F G L
Sbjct: 7 HMSVWGLISEASLVVQAVMVILVLASVSSWYLIIRRSAALHRSERLLRSFQQRFRQGGDL 66
Query: 70 ETVCKSLKNH---HNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
+ + + L IF++ E+ + + +P + + ++R + VAIA + E
Sbjct: 67 AQLYREGQQQPLPEEAALQRIFLAGYGEFAQLQREAGIAPDAVAEGVERSLYVAIAEQEE 126
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLG 185
+ + L FL ++ S +G+ G V G+M F ++ + ++ PGI E+LI+ +G
Sbjct: 127 RLEKGLQFLATVGSVSPYIGLFGTVWGIMNSFLGLSQVQQATLSTVAPGIAEALIATAIG 186
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
L +IP+ +AYN+F + + F NE A L R+
Sbjct: 187 LFAAIPAVMAYNRFAARGQTLVGRYYAFGNELQARLHRR 225
>gi|89075794|ref|ZP_01162182.1| Putative TolQ protein [Photobacterium sp. SKA34]
gi|89048526|gb|EAR54101.1| Putative TolQ protein [Photobacterium sp. SKA34]
Length = 229
Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 108/218 (49%), Gaps = 3/218 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
++++ + + G ++ +L SI SW++II++S R+ FE FWSG L
Sbjct: 4 ELTVLDIILNSGALEIMVMLILLGMSIASWTMIIKRSQVLSEASRKATNFEDRFWSGIDL 63
Query: 70 ETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ K ++ + G IF S E+ + + P + + R M V++++E++E
Sbjct: 64 SQLYKEVQARKDDLTGSEQIFYSGFKEFARLHRSNDKVPEAVMEGTSRAMRVSLSKEVDE 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ L FL ++ S +G+ G VLG+M F ++ + ++ PGI +LI+ +GL
Sbjct: 124 LETNLPFLATVGSISPYIGLFGTVLGIMTAFIALGAMKQPTLATVAPGIAGALIATAMGL 183
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+IP+ + YN+ K F EFS+IL RQ
Sbjct: 184 FAAIPAVMFYNRLTNKVSKLEHTYATFMEEFSSILHRQ 221
>gi|50085689|ref|YP_047199.1| group A colicins tolerance protein [Acinetobacter sp. ADP1]
gi|49531665|emb|CAG69377.1| tolerance to group A colicins, single-stranded DNA filamentous
phage, required for OM integrity [Acinetobacter sp.
ADP1]
Length = 232
Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 114/220 (51%), Gaps = 3/220 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+ I L +Q V+ ++ +L + SI SW +I + +++ +Q F+++FWSG L
Sbjct: 9 LHISDLILQASPVVQAVMLILLLASIYSWYLIAKLHLSYKKSAQQDEHFQKMFWSGAELN 68
Query: 71 TVCKSLK-NHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
T+ + + N GL IF + E+ K + A S I+ +R++ V ++R+ ++
Sbjct: 69 TLYNNAQLNSKRTGLEDIFYHGLGEFFKLKKRQATSTQTIEG-TERILRVGLSRDQSQLE 127
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCV 188
+ L L S+ S VG+ G V G+M F +A + ++ PGI E+LI+ +GL
Sbjct: 128 QGLGTLASIGSVAPYVGLFGTVWGIMNAFIGLAAVDQVTLATVAPGIAEALIATAIGLFA 187
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
+IP+ +A+N F + FA E A+L RQ+ G+
Sbjct: 188 AIPAVLAFNHFTSKGEAIYSDRALFAEEMVALLQRQSVGS 227
>gi|320354284|ref|YP_004195623.1| cell division and transport-associated protein TolQ [Desulfobulbus
propionicus DSM 2032]
gi|320122786|gb|ADW18332.1| Cell division and transport-associated protein TolQ [Desulfobulbus
propionicus DSM 2032]
Length = 230
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 112/226 (49%), Gaps = 11/226 (4%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
M +SIF + G+ K I+ +L IFS+ SWS++I K + F R +F FW ++
Sbjct: 1 MSLSIFEIMKHAGMMGKLIMLILLIFSVASWSIVIMKFLMFRKARNASLDFLDAFWDSKT 60
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKK-SCDKGA-------RSPIGIQDRIDRMMDVA 120
L + + + A +F++ +E KK S + A + + D + R + A
Sbjct: 61 LNEAYDAAREYPLSPEATVFVTGYNELKKISAARSAGQALATLETQLATMDNLKRAVRKA 120
Query: 121 IARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA--GYYSNNVVSIPGIIES 178
E + + +S L + SA +G+ G V G+M FQSI G S VV+ PGI E+
Sbjct: 121 QFLESDRLASYISVLATTGSATPFIGLFGTVWGIMASFQSIGERGSASLAVVA-PGISEA 179
Query: 179 LISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
L++ GL V+IP+ I YN F +F +E F+ +F ++ R
Sbjct: 180 LVATAAGLAVAIPAVIFYNYFSNKVAEFDSNVESFSTDFINLIERD 225
>gi|257455251|ref|ZP_05620486.1| protein TolQ [Enhydrobacter aerosaccus SK60]
gi|257447213|gb|EEV22221.1| protein TolQ [Enhydrobacter aerosaccus SK60]
Length = 242
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 110/217 (50%), Gaps = 3/217 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
I + +L + VK I+ +L S+L W I + S R FE+ FWSG L
Sbjct: 5 IDLVSLVTHASIFVKIIMGILLFASLLCWVTIFRLSSRLAIATRADNYFEKTFWSGVELP 64
Query: 71 TVCKSLK-NHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
T+ K ++ N GL IF SE+ K K ++ + + ++R + V + R+ E+
Sbjct: 65 TLYKGVQGNPDRSGLEQIFFIGFSEFLKLL-KNTQARSDVIEGVERKLRVGLGRQQLELE 123
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCV 188
+ L L S++S +G+LG V G+M F ++ + ++ PGI E+LI+ LGL
Sbjct: 124 QGLPLLASIASVSPYIGLLGTVWGIMTAFMGLSTSSQATLAAVAPGIAEALIATALGLFA 183
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+++A+N F + K F +E + +L RQT
Sbjct: 184 AIPAALAFNHFTAKNDKVYQSRSLFCDEMTGMLLRQT 220
>gi|294651069|ref|ZP_06728407.1| TonB family auxiliary protein TolQ [Acinetobacter haemolyticus ATCC
19194]
gi|292823048|gb|EFF81913.1| TonB family auxiliary protein TolQ [Acinetobacter haemolyticus ATCC
19194]
Length = 232
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 110/215 (51%), Gaps = 3/215 (1%)
Query: 16 LFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKS 75
L +Q V+ ++ +L + SI SW VI + ++F + F+++FWSG L T+ +
Sbjct: 14 LILQASPVVQLVMLILLLASIYSWYVIAKLHMSFKKTGQDDEHFQKMFWSGAELNTLYNN 73
Query: 76 LK-NHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSF 134
+ N GL +F +SE+ K + A + I+ +RM+ V ++RE + + L
Sbjct: 74 AQLNSKRNGLEDVFYQGLSEFFKLKKRKADTTQTIEG-TERMLRVGLSREQGGLEQNLGV 132
Query: 135 LGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCVSIPSS 193
L S+ S +G+ G V G+M F +A + ++ PGI E+LI+ +GL +IP+
Sbjct: 133 LASIGSVAPYIGLFGTVWGIMNAFIGLAAVDQVTLATVAPGIAEALIATAIGLFAAIPAV 192
Query: 194 IAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
+A+N F + FA E A+L RQ+ G
Sbjct: 193 LAFNHFTAKGEAIYSDRALFAEEMVALLQRQSIGT 227
>gi|146282309|ref|YP_001172462.1| tolQ protein [Pseudomonas stutzeri A1501]
gi|145570514|gb|ABP79620.1| tolQ protein [Pseudomonas stutzeri A1501]
Length = 237
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 110/219 (50%), Gaps = 4/219 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
+S++ L + L V+ ++ +L + S+ SW +II++S R F+Q F G L
Sbjct: 7 HMSVWGLISEASLVVQAVMVILVLASVSSWYLIIRRSAALHRSERLLHSFQQRFRQGGDL 66
Query: 70 ETVCKSLKNH---HNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
+ + + L IF++ ++ + + +P + + ++R + VAIA + E
Sbjct: 67 AQLYREGQQQPLPEEAALQRIFLAGYGDFAQLQREAGIAPDAVAEGVERSLYVAIAEQEE 126
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLG 185
+ + L FL ++ S +G+ G V G+M F ++ + ++ PGI E+LI+ +G
Sbjct: 127 RLEKGLQFLATVGSVSPYIGLFGTVWGIMNSFLGLSQVQQATLSTVAPGIAEALIATAIG 186
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
L +IP+ +AYN+F +K + F NE A L R+
Sbjct: 187 LFAAIPAVMAYNRFAAHGQKLVGRYYAFGNELQARLHRR 225
>gi|332290103|ref|YP_004420955.1| colicin uptake protein TolQ [Gallibacterium anatis UMN179]
gi|330432999|gb|AEC18058.1| colicin uptake protein TolQ [Gallibacterium anatis UMN179]
Length = 229
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 117/221 (52%), Gaps = 3/221 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
+++ F LF++ + V+ +I++L +FSI+SW++IIQ+S +Q FE+ FWSG+ L
Sbjct: 3 ELNFFDLFLKASVVVQIVISILILFSIISWAIIIQRSKILSKALKQSMTFEERFWSGEDL 62
Query: 70 ETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + L N + G IF E+ + + I R M +A+ RE+E+
Sbjct: 63 TKLYEGLSNRRDGLSGSEQIFFVGFKEFSRLKQANPNASESIIQGSSRAMHLAMNREIED 122
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ + FL +++S +G+ G V G+M F +++ + + PGI E+LI+ +GL
Sbjct: 123 VENTVPFLATVASVSPYIGLFGTVWGIMHAFMALSNVKQATLQMVAPGIAEALIATAIGL 182
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEG 227
+IP+ +AYN+ K F +EF+ IL R+ G
Sbjct: 183 FAAIPAVMAYNRLSLRVNKLEQNYANFIDEFTTILHRKVFG 223
>gi|262165951|ref|ZP_06033688.1| MotA/TolQ/ExbB proton channel family protein [Vibrio mimicus VM223]
gi|262025667|gb|EEY44335.1| MotA/TolQ/ExbB proton channel family protein [Vibrio mimicus VM223]
Length = 208
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 102/202 (50%), Gaps = 4/202 (1%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHN--IG 83
++TLL + S+ SW+ II++S ++ FE FWSG L + + +K + G
Sbjct: 2 VMLTLLGM-SVASWAAIIKRSKVISAAEKEADTFEDRFWSGIDLGALYQDVKKRKDDIYG 60
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
+ IF + +E+ + +P + + R M VA+ARE++ + L FL ++ S
Sbjct: 61 IEEIFYAGFTEFARLRKTNPSAPDFVMEGTGRAMRVAVAREVDSLETSLPFLATVGSISP 120
Query: 144 LVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCVSIPSSIAYNKFIED 202
+G+ G V G+M F ++ + + PGI E+LI+ +GL +IP+ +AYN+
Sbjct: 121 YIGLFGTVWGIMHAFIALGEVKQATLAMVAPGIAEALIATAIGLFAAIPAVMAYNRLSNK 180
Query: 203 SKKFAMQMEGFANEFSAILSRQ 224
K F+ EF IL RQ
Sbjct: 181 VSKLEHNYATFSEEFHTILHRQ 202
>gi|226952121|ref|ZP_03822585.1| Tol-Pal system TolQ protein [Acinetobacter sp. ATCC 27244]
gi|226837130|gb|EEH69513.1| Tol-Pal system TolQ protein [Acinetobacter sp. ATCC 27244]
Length = 232
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 110/215 (51%), Gaps = 3/215 (1%)
Query: 16 LFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKS 75
L +Q V+ ++ +L + SI SW VI + ++F + F+++FWSG L T+ +
Sbjct: 14 LILQASPVVQLVMLILLLASIYSWYVIAKLHMSFKKTGQDDEHFQKMFWSGAELNTLYNN 73
Query: 76 LK-NHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSF 134
+ N GL +F +SE+ K + A + I+ +RM+ V ++RE + + L
Sbjct: 74 AQLNSKRNGLEDVFYQGLSEFFKLKKRKADTTQTIEG-TERMLRVGLSREQGGLEQSLGV 132
Query: 135 LGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCVSIPSS 193
L S+ S +G+ G V G+M F +A + ++ PGI E+LI+ +GL +IP+
Sbjct: 133 LASIGSVAPYIGLFGTVWGIMNAFIGLAAVDQVTLATVAPGIAEALIATAIGLFAAIPAV 192
Query: 194 IAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
+A+N F + FA E A+L RQ+ G
Sbjct: 193 LAFNHFTAKGEAIYSDRALFAEEMVALLQRQSIGT 227
>gi|315126273|ref|YP_004068276.1| inner membrane protein required for outer membrane integrity,
uptake of group A colicins and phage DNA
[Pseudoalteromonas sp. SM9913]
gi|315014787|gb|ADT68125.1| inner membrane protein required for outer membrane integrity,
uptake of group A colicins and phage DNA
[Pseudoalteromonas sp. SM9913]
Length = 204
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 99/196 (50%), Gaps = 3/196 (1%)
Query: 37 LSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCK--SLKNHHNIGLAAIFMSAMSE 94
+SW++I Q+ ++FEQ FWSG L + S + + G+ A+F S E
Sbjct: 1 MSWAIIFQRKKAISDALANAKKFEQRFWSGVDLSKLYNEISSRGGQSTGIEALFTSGFKE 60
Query: 95 WKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGM 154
+ + +S + + R M VA++RE+E++ LSFL ++ S +G+ G V G+
Sbjct: 61 FARHKKNTFQSAGIVMEGTHRSMRVALSREIEKLESSLSFLATVGSISPYIGLFGTVWGI 120
Query: 155 MGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGF 213
M F ++ + + PGI E+LI+ +GL +IP+ IAYN+F +K F
Sbjct: 121 MNAFIALGEVKQATLQMVAPGIAEALIATAMGLFAAIPAVIAYNRFANKVEKLESHYINF 180
Query: 214 ANEFSAILSRQTEGNI 229
EF+ IL RQ I
Sbjct: 181 MEEFANILHRQAATQI 196
>gi|330445538|ref|ZP_08309190.1| protein TolQ [Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
gi|328489729|dbj|GAA03687.1| protein TolQ [Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
Length = 210
Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 101/201 (50%), Gaps = 3/201 (1%)
Query: 27 IITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHN--IGL 84
++ +L SI SW++II++S R+ +FE FWSG L + K ++ + G
Sbjct: 2 VMLILLGMSIASWAMIIKRSQVLSEASRKAAQFEDRFWSGVDLSQLYKEVQGRKDELTGS 61
Query: 85 AAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLL 144
IF S E+ + + P + + R M V++++E++E+ L FL ++ S
Sbjct: 62 EQIFYSGFKEFARLHRSNDKVPEAVMEGTGRAMRVSLSKEVDELETSLPFLATVGSISPY 121
Query: 145 VGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCVSIPSSIAYNKFIEDS 203
+G+ G V G+M F ++ + + PGI E+L++ +GL +IP+ + YN+
Sbjct: 122 IGLFGTVWGIMTAFIALGAVKQATLAMVAPGIAEALVATAMGLFAAIPAVMFYNRLTNKV 181
Query: 204 KKFAMQMEGFANEFSAILSRQ 224
K F EFS+IL RQ
Sbjct: 182 AKLEHTYATFMEEFSSILHRQ 202
>gi|88800182|ref|ZP_01115750.1| TolQ protein [Reinekea sp. MED297]
gi|88777028|gb|EAR08235.1| TolQ protein [Reinekea sp. MED297]
Length = 213
Score = 99.4 bits (246), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 100/200 (50%), Gaps = 5/200 (2%)
Query: 31 LFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSL---KNHHNIGLAAI 87
L S+ +W I ++ + FE+ FWSG L + + + + N G +I
Sbjct: 4 LVALSVATWVFIFERRNVMNQAASKLAAFEERFWSGIDLAHLYRQVNANPDEANCG-ESI 62
Query: 88 FMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGI 147
F + E+ + + GI R M VA+++E + + LSF+ ++ S +G+
Sbjct: 63 FRAGFKEFSRMRQQNVTDADGIMAGCQRAMRVAVSKENDRLDSHLSFMATVGSTSPYIGL 122
Query: 148 LGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCVSIPSSIAYNKFIEDSKKF 206
G V G+M F +A ++ ++ PGI E+LI+ +GL +IP+ IAYN+F S K
Sbjct: 123 FGTVWGIMHSFLGLATVTQVSLSTVAPGIAEALIATAMGLFAAIPAVIAYNRFSARSDKI 182
Query: 207 AMQMEGFANEFSAILSRQTE 226
ME FA EFSAIL RQ
Sbjct: 183 LTGMEMFAEEFSAILHRQAH 202
>gi|78358668|ref|YP_390117.1| tolQ protein [Desulfovibrio desulfuricans subsp. desulfuricans str.
G20]
gi|78221073|gb|ABB40422.1| Cell division and transport-associated protein TolQ [Desulfovibrio
desulfuricans subsp. desulfuricans str. G20]
Length = 228
Score = 99.4 bits (246), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 111/210 (52%), Gaps = 2/210 (0%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
M+ +IF L MQ VK ++++L + S+ SWS+++QK + + RR+ + F +
Sbjct: 1 MESNIFGLLMQATPVVKGVLSILVLMSVASWSLMLQKWIVLSSARRKAAQGLSAFTHARD 60
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
L +SL H L + ++E+ + D + + + D + R + ++ + +
Sbjct: 61 LREAVQSLSGDHTSPLYQVAQEGVAEYNRLRDMQSSEDV-VADNVRRALRQGVSMQTSRL 119
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLC 187
+ L+FL + ++A +G+ G V G+M F SI + ++ ++ PGI E+L++ +GL
Sbjct: 120 SSSLAFLATCANAAPFIGLFGTVWGIMHSFHSIGLMKTASLAAVAPGISEALVATAIGLG 179
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEF 217
V+IP+++ YN F+ +Q+ FA F
Sbjct: 180 VAIPATVGYNLFLGMLNGIEVQLVNFAGVF 209
>gi|229591135|ref|YP_002873254.1| putative TolQ transport transmembrane protein [Pseudomonas
fluorescens SBW25]
gi|229363001|emb|CAY49951.1| putative TolQ transport transmembrane protein [Pseudomonas
fluorescens SBW25]
Length = 230
Score = 99.0 bits (245), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 108/222 (48%), Gaps = 9/222 (4%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
++I+ L L VK ++ L + S+LSW +IIQ+ L RQ F + F + L
Sbjct: 7 HMTIWGLISDASLLVKAVMVTLLLASLLSWYLIIQRGSVLRRLERQLNGFVRRFRAASDL 66
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWK--KSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + + G+A IF++ + E++ S D + + ++R + VAI + E
Sbjct: 67 QPLYRETVQAGEGGIAPIFIAGVQEYQHLHSHDP------AVLEGVERALQVAITEQEIE 120
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ + L FL ++ S +G+ G V G+M F ++ + ++ PGI E+LI+ +GL
Sbjct: 121 LEKGLQFLATVGSVSPYIGLFGTVWGIMNSFIGLSQVQQATLSTVAPGIAEALIATAIGL 180
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
+IP+ IAYN+F + + F NE L R G
Sbjct: 181 FAAIPAVIAYNRFAARGQTLLTRYYAFGNELQVRLHRTLRGT 222
>gi|51246261|ref|YP_066145.1| biopolymer transport protein TolQ [Desulfotalea psychrophila LSv54]
gi|50877298|emb|CAG37138.1| related to biopolymer transport protein (TolQ) [Desulfotalea
psychrophila LSv54]
Length = 232
Score = 99.0 bits (245), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 109/229 (47%), Gaps = 10/229 (4%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
MD+SI + + G VK ++ +L +FS+ SW++++ K +RR +F FW +
Sbjct: 1 MDLSITHMILSAGPMVKFVMLVLLVFSVSSWTIVLMKWALLRNIRRDSEDFLDSFWGSPN 60
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKK-----SCDKGARSPIGIQ----DRIDRMMDV 119
L K + AA+F + +E +K S + + P+G+Q D + R +
Sbjct: 61 LNEAYKEVNQFPYSSEAAVFSAGFTELQKITKIQSSKEESNQPLGMQMAAMDNLKRAVRK 120
Query: 120 AIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIES 178
A ++ E + L FL + SA +G+ G V G+M F I S ++ V PGI E+
Sbjct: 121 AETQKFNEFNKALPFLATTGSASPFIGLFGTVWGIMTSFHQIGQQGSASLAVVAPGISEA 180
Query: 179 LISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEG 227
L+ GL V+IP+ + +N F + + F +F ++ R G
Sbjct: 181 LVVTAAGLFVAIPAVVTFNYFSHKFDQADAAAQHFTTDFLNLIERDLLG 229
>gi|319779145|ref|YP_004130058.1| MotA/TolQ/ExbB proton channel family protein [Taylorella
equigenitalis MCE9]
gi|317109169|gb|ADU91915.1| MotA/TolQ/ExbB proton channel family protein [Taylorella
equigenitalis MCE9]
Length = 229
Score = 98.2 bits (243), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 75/228 (32%), Positives = 114/228 (50%), Gaps = 5/228 (2%)
Query: 1 MNNYGLAIMD-ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREF 59
MN + D +SI L L V+ I+ LL + S++SW++I K + + F
Sbjct: 1 MNEVAINTPDKMSILTLITDASLPVQIIMLLLLVLSVVSWAIIFSKFTLLLGSNTSNKNF 60
Query: 60 EQLFWSGQSLETV-CKSLKNHHNIGLAA-IFMSAMSEWKKSCDKGARSPIGIQDRIDRMM 117
FW G L + K K G+ A +F + M+E+ K+ K SP DR M
Sbjct: 61 LNDFWRGGDLTDLHSKIQKAPRKYGITARVFEAGMTEFLKARSK-KLSPELQTLAADRAM 119
Query: 118 DVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGII 176
RE++ + +LSFL ++ S +G+LG V G+M F + + + ++ PGI
Sbjct: 120 QATYNREMDGLDSRLSFLATVGSVSPYIGLLGTVWGIMHSFLGLTADTTATLSAVAPGIA 179
Query: 177 ESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
E+LI+ +GL +IP+SIAYN F K + EGF +EF IL RQ
Sbjct: 180 EALIATAIGLFAAIPASIAYNSFSRSIDKVSTNTEGFMDEFLNILQRQ 227
>gi|261855151|ref|YP_003262434.1| protein TolQ [Halothiobacillus neapolitanus c2]
gi|261835620|gb|ACX95387.1| protein TolQ [Halothiobacillus neapolitanus c2]
Length = 225
Score = 98.2 bits (243), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 100/197 (50%), Gaps = 3/197 (1%)
Query: 35 SILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCK--SLKNHHNIGLAAIFMSAM 92
S+ SW++I KS R Q + FE+ FWSG SL S G AIF +
Sbjct: 29 SVASWALIFHKSSLLRRARAQAKRFEESFWSGGSLNDFYDRISRDPRPREGQEAIFEAGF 88
Query: 93 SEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVL 152
E+K+ RS + + ++R M V + R++++ E LS L ++ S VG+ G V
Sbjct: 89 REFKRLRQIEGRSSSELLEGVERAMRVTLHRQIDKFEEGLSVLATIGSVSPYVGLFGTVW 148
Query: 153 GMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
G+M F ++ + + ++ P I E+LI+ +GL +IP+ +AYN++ + + +
Sbjct: 149 GIMSAFMNLGNAQNATLATVAPPIAEALIATAMGLFAAIPAVVAYNRYSTQIDELFGRYD 208
Query: 212 GFANEFSAILSRQTEGN 228
F +EF +L RQ G
Sbjct: 209 RFTDEFLGLLQRQIGGQ 225
>gi|77360812|ref|YP_340387.1| inner membrane protein required for outer membrane integrity,
uptake of group A colicins and phage DNA
[Pseudoalteromonas haloplanktis TAC125]
gi|76875723|emb|CAI86944.1| inner membrane protein required for outer membrane integrity,
uptake of group A colicins and phage DNA
[Pseudoalteromonas haloplanktis TAC125]
Length = 204
Score = 97.8 bits (242), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 100/196 (51%), Gaps = 3/196 (1%)
Query: 37 LSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCK--SLKNHHNIGLAAIFMSAMSE 94
+SW++I Q+ ++FEQ FWSG L + S ++ + G+ A+F + E
Sbjct: 1 MSWAIIFQRKKAISDALSNAKKFEQKFWSGIDLSKLYSEISSRSGQSKGIEALFTAGFKE 60
Query: 95 WKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGM 154
+ + +S + + R M VA++RE+E++ LSFL ++ S +G+ G V G+
Sbjct: 61 FARHKKNTFQSAGIVMEGTHRSMRVALSREVEKLESSLSFLATVGSISPYIGLFGTVWGI 120
Query: 155 MGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGF 213
M F ++ + + PGI E+LI+ +GL +IP+ IAYN+F +K F
Sbjct: 121 MNAFIALGEVKQATLQMVAPGIAEALIATAMGLFAAIPAVIAYNRFANKVEKLETHYINF 180
Query: 214 ANEFSAILSRQTEGNI 229
EF+ IL RQ I
Sbjct: 181 MEEFANILHRQAATQI 196
>gi|77920568|ref|YP_358383.1| TolQ protein [Pelobacter carbinolicus DSM 2380]
gi|77546651|gb|ABA90213.1| Cell division and transport-associated protein TolQ [Pelobacter
carbinolicus DSM 2380]
Length = 223
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 100/204 (49%), Gaps = 20/204 (9%)
Query: 34 FSILSWSVIIQKSVNFITLRRQFR------EFEQLFWSGQSLETVCKSLKNHHNIGLAAI 87
FS+LSW++I F+ R +R F+Q FW+ + ++ + + L++ + A++
Sbjct: 21 FSLLSWAII------FLKFRVIYRAISDSQRFQQFFWNKRHIDAIAQKLRDFPHAPTASL 74
Query: 88 FMSAMSEWKKSC-DKGARSP------IGIQDRIDRMMDVAIARELEEITEKLSFLGSMSS 140
F E K++ D G P +G D + R + A +E + + L FL + S
Sbjct: 75 FRDGYQEMKRNQRDNGTDEPTLFSADMGQADNVARALRRATNQETQRLERYLPFLATTGS 134
Query: 141 AGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKF 199
+G+ G V G+M F I S ++ V PGI E+L++ +GL +IP+ +AYN F
Sbjct: 135 TAPFIGLFGTVWGIMDSFHGIGKTGSASLAVVAPGISEALVATAIGLVAAIPAVVAYNHF 194
Query: 200 IEDSKKFAMQMEGFANEFSAILSR 223
+ M+ F+ EF I+ R
Sbjct: 195 VSKVNVLTGDMDSFSQEFLNIVDR 218
>gi|330958284|gb|EGH58544.1| tolQ protein [Pseudomonas syringae pv. maculicola str. ES4326]
Length = 234
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 108/219 (49%), Gaps = 1/219 (0%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
++++ L L VK ++ +L + S++SW +IIQ+S+ R F+Q F S L
Sbjct: 7 HMTVWGLISDASLLVKAVMLILLLASLVSWFLIIQRSLALRQYERSLDAFQQRFRSETEL 66
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+ G+ +F + +E+ + + P + ++R + VAI+ + ++
Sbjct: 67 APLYSRSAQEAADGIGQVFNAGYAEYVQLKQRPGIEPDTVLSGVERALQVAISEQELQLE 126
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCV 188
+ L FL ++ S +G+ G V G+M F ++ + ++ PGI E+LI+ +GL
Sbjct: 127 KGLQFLATVGSVSPYIGLFGTVWGIMNSFIGLSQVQQATLSTVAPGIAEALIATAIGLFA 186
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEG 227
+IP+ IAYN+F + + F NE L+R +G
Sbjct: 187 AIPAVIAYNRFAARGQTLTARYYTFGNELQVRLNRTLQG 225
>gi|169632717|ref|YP_001706453.1| tolerance to group A colicins, single-stranded DNA filamentous
phage, required for OM integrity [Acinetobacter
baumannii SDF]
gi|169795061|ref|YP_001712854.1| tolerance to group A colicins, single-stranded DNA filamentous
phage, required for OM integrity [Acinetobacter
baumannii AYE]
gi|213158277|ref|YP_002320328.1| protein TolQ [Acinetobacter baumannii AB0057]
gi|215482610|ref|YP_002324802.1| protein TolQ [Acinetobacter baumannii AB307-0294]
gi|239501029|ref|ZP_04660339.1| protein TolQ [Acinetobacter baumannii AB900]
gi|260556545|ref|ZP_05828763.1| TolQ [Acinetobacter baumannii ATCC 19606]
gi|301344813|ref|ZP_07225554.1| protein TolQ [Acinetobacter baumannii AB056]
gi|301510232|ref|ZP_07235469.1| protein TolQ [Acinetobacter baumannii AB058]
gi|301595125|ref|ZP_07240133.1| protein TolQ [Acinetobacter baumannii AB059]
gi|332851091|ref|ZP_08433200.1| protein TolQ [Acinetobacter baumannii 6013150]
gi|332869660|ref|ZP_08438848.1| protein TolQ [Acinetobacter baumannii 6013113]
gi|332875981|ref|ZP_08443767.1| protein TolQ [Acinetobacter baumannii 6014059]
gi|169147988|emb|CAM85851.1| tolerance to group A colicins, single-stranded DNA filamentous
phage, required for OM integrity [Acinetobacter
baumannii AYE]
gi|169151509|emb|CAP00272.1| tolerance to group A colicins, single-stranded DNA filamentous
phage, required for OM integrity [Acinetobacter
baumannii]
gi|193078073|gb|ABO13008.2| tolerance to group A colicins single-stranded DNA filamentous phage
[Acinetobacter baumannii ATCC 17978]
gi|213057437|gb|ACJ42339.1| protein TolQ [Acinetobacter baumannii AB0057]
gi|213987830|gb|ACJ58129.1| protein TolQ [Acinetobacter baumannii AB307-0294]
gi|260409804|gb|EEX03104.1| TolQ [Acinetobacter baumannii ATCC 19606]
gi|322509066|gb|ADX04520.1| tolQ [Acinetobacter baumannii 1656-2]
gi|323519047|gb|ADX93428.1| group A colicins tolerance protein [Acinetobacter baumannii
TCDC-AB0715]
gi|332730255|gb|EGJ61580.1| protein TolQ [Acinetobacter baumannii 6013150]
gi|332732562|gb|EGJ63795.1| protein TolQ [Acinetobacter baumannii 6013113]
gi|332735847|gb|EGJ66888.1| protein TolQ [Acinetobacter baumannii 6014059]
Length = 232
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 114/220 (51%), Gaps = 3/220 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+ I L +Q V+ ++ +L + SI SW +I + +++ R+ F+++FWSG L
Sbjct: 9 LHISDLILQASPVVQLVMLILLLASIFSWYLIAKLHMSYKKARQDDEHFQKMFWSGAELN 68
Query: 71 TVCKSLK-NHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
T+ + + N GL IF +SE+ K + A + I+ +R++ V ++R+ +
Sbjct: 69 TLYNNAQLNSKRSGLEDIFYQGLSEFFKLKKRQAPTSQMIEG-TERILRVGLSRDQGSLE 127
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCV 188
L L S+ S +G+ G V G+M F +A + ++ PGI E+LI+ +GL
Sbjct: 128 YGLGTLASIGSVAPYIGLFGTVWGIMNAFIGLAAVDQVTLATVAPGIAEALIATAIGLFA 187
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
+IP+ +A+N F S+ FA E A+L RQ+ G+
Sbjct: 188 AIPAVLAFNHFTAKSESVYSDRALFAEEMIALLQRQSVGS 227
>gi|317486274|ref|ZP_07945106.1| TolQ protein [Bilophila wadsworthia 3_1_6]
gi|316922444|gb|EFV43698.1| TolQ protein [Bilophila wadsworthia 3_1_6]
Length = 230
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 100/192 (52%), Gaps = 2/192 (1%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
MD+SI +L Q L K ++ +L S+ SW+++ +K +N ++ + F +
Sbjct: 1 MDLSILSLLAQATLVAKAVLVVLLFMSVFSWALMFRKWMNIRAALKKAADGMDRFNHARD 60
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
L +SL + L + ++E+ +S + G + + D + R + + E+ +
Sbjct: 61 LREAVQSLGGDPDSPLYTVAHEGVTEFNRSKEAGNSEDV-VVDNVRRALRQGVDMEMTRL 119
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLC 187
T LSFL + ++ +G+ G V G+M F +I S ++ ++ PGI E+LI+ +GL
Sbjct: 120 TSSLSFLATSANTAPFIGLFGTVWGIMNTFHAIGAMKSASLATVAPGISEALIATAMGLL 179
Query: 188 VSIPSSIAYNKF 199
V+IP++I YN F
Sbjct: 180 VAIPATIGYNTF 191
>gi|258405708|ref|YP_003198450.1| MotA/TolQ/ExbB proton channel [Desulfohalobium retbaense DSM 5692]
gi|257797935|gb|ACV68872.1| MotA/TolQ/ExbB proton channel [Desulfohalobium retbaense DSM 5692]
Length = 243
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 112/217 (51%), Gaps = 8/217 (3%)
Query: 9 MDISIFALFMQM----GLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFW 64
MDI+ + F M + V+ ++ LL S+ SW++I+ K +R+ R+ + F
Sbjct: 1 MDIATHSGFWGMIQEATIVVQFVLALLAAMSVTSWAIILYKIFQLTQAKRKVRQEAEQFA 60
Query: 65 SGQSLETVCKSLKNHHNIGLAAIFMSAMSEW---KKSCDKGARSPIGIQDRIDRMMDVAI 121
+ + L T + LK + N L + A+SE ++S + + D I R++ +
Sbjct: 61 NARDLATAMQQLKRNQNSALYLVGYEAISELHRLERSSLQSRQKAAVAADNIRRVLRRGV 120
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLI 180
++ + + + L+FL + +A +G+ G V G+M FQ+I + + ++ PGI E+L+
Sbjct: 121 SKRMTQYAQNLAFLATCGNAAPFIGLFGTVWGIMHAFQTIGLEQTAALAAVAPGISEALV 180
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEF 217
+ +GL V+IP++IAYN F+ +M FA F
Sbjct: 181 ATAIGLAVAIPATIAYNSFLGVLNAVEAEMVNFAGSF 217
>gi|182677523|ref|YP_001831669.1| MotA/TolQ/ExbB proton channel [Beijerinckia indica subsp. indica
ATCC 9039]
gi|182633406|gb|ACB94180.1| MotA/TolQ/ExbB proton channel [Beijerinckia indica subsp. indica
ATCC 9039]
Length = 246
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 111/222 (50%), Gaps = 12/222 (5%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+S LF+Q VK ++ LL + S W VI K + L+++ + + G +
Sbjct: 16 LSPVELFLQADSVVKTVMILLVLASAWGWVVIFNKLIRLSVLQKRAAKLLKSVQEGLPVA 75
Query: 71 TVCKSL-KNHHNIGLAAIFMSAMSEWKKSCD----KGARSPIGIQDRIDRMMDVAIAREL 125
T+ +S K N +++ + + E +S D G R +Q+RI R+ +A + +
Sbjct: 76 TLAESFDKAPANDPFVSVYKAMIEEHARSADLIYTDGQRD--SLQERIHRVAHLASSHAI 133
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV---VSIPGIIESLISI 182
+++ +L L ++ + VG+ G V G+M FQ IA SNN V PGI E+L +
Sbjct: 134 DQLQSQLPGLATIGAVAPFVGLFGTVWGIMNSFQGIAA--SNNTSLSVVAPGIAEALFAT 191
Query: 183 LLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
LGL +IP+ + YN+ D K++ ++ F N F LSRQ
Sbjct: 192 ALGLVAAIPAVVFYNRIGTDISKYSKKLSAFINVFEIELSRQ 233
>gi|299769118|ref|YP_003731144.1| protein TolQ [Acinetobacter sp. DR1]
gi|298699206|gb|ADI89771.1| protein TolQ [Acinetobacter sp. DR1]
Length = 232
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 115/221 (52%), Gaps = 5/221 (2%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+ I L +Q V+ ++ +L + SI SW +I + +++ ++ F+++FWSG L
Sbjct: 9 LHISDLILQASPVVQLVMLILLLASIFSWYLIAKLHMSYKKAHQEDEHFQKMFWSGAELN 68
Query: 71 TVCKSLK-NHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQ-DRIDRMMDVAIARELEEI 128
T+ + + N GL IF +SE+ K K ++P+ + +R++ V ++R+ +
Sbjct: 69 TLYNNAQLNSKRSGLEDIFYQGLSEFFKL--KKRQAPVSQTIEGTERILRVGLSRDQSHL 126
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLC 187
L L S+ S +G+ G V G+M F +A + ++ PGI E+LI+ +GL
Sbjct: 127 EYGLGTLASIGSVAPYIGLFGTVWGIMNAFIGLAAVDQVTLATVAPGIAEALIATAIGLF 186
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
+IP+ +A+N F S+ FA E A+L RQ+ G+
Sbjct: 187 AAIPAVLAFNHFTSKSESVYSDRALFAEEMIALLQRQSVGS 227
>gi|302343859|ref|YP_003808388.1| protein TolQ [Desulfarculus baarsii DSM 2075]
gi|301640472|gb|ADK85794.1| protein TolQ [Desulfarculus baarsii DSM 2075]
Length = 277
Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 112/228 (49%), Gaps = 16/228 (7%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRR---QFREFEQLFWSGQ 67
+ I L Q G VK ++ LL +FS++SW+VI K + LRR Q +F+ +FW +
Sbjct: 43 MDIMHLIFQAGWVVKFVLFLLVLFSVISWAVIFSK---LMVLRRSIKQNEQFQAMFWHAK 99
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKK----SCDKGARSPIGIQDRIDRMMDVAIAR 123
SL LA +F A +E +K +G P G+ I R + A
Sbjct: 100 SLGAANAQAMQLAGSPLATVFRLAYAELQKVMGLRKGRGDGLPEGLMANIKRALSRGTAA 159
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISI 182
E ++ ++FL + ++ +G+ G V G+M F +I + N+ ++ PGI E+L++
Sbjct: 160 EATKLARSVTFLATCANTSPFIGLFGTVWGIMDAFSNIGALKTANLATVAPGIAEALVAT 219
Query: 183 LLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEF-----SAILSRQT 225
GL +IP+ + +N F + +M+ F+ +F ++SRQ+
Sbjct: 220 ATGLFAAIPAVVFFNHFNRRIQVLEAEMDTFSQDFLNLVELEVMSRQS 267
>gi|262278155|ref|ZP_06055940.1| tolerance protein to group A colicins [Acinetobacter calcoaceticus
RUH2202]
gi|262258506|gb|EEY77239.1| tolerance protein to group A colicins [Acinetobacter calcoaceticus
RUH2202]
Length = 232
Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 115/221 (52%), Gaps = 5/221 (2%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+ I L +Q V+ ++ +L + SI SW +I + +++ ++ F+++FWSG L
Sbjct: 9 LHISDLILQASPVVQLVMLILLLASIFSWYLIAKLHMSYKKAHQEDEHFQKMFWSGAELN 68
Query: 71 TVCKSLK-NHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQ-DRIDRMMDVAIARELEEI 128
T+ + + N GL IF +SE+ K K ++P+ + +R++ V ++R+ +
Sbjct: 69 TLYNNAQLNSKRSGLEDIFYQGLSEFFKL--KKRQAPVSQTIEGTERILRVGLSRDQSHL 126
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLC 187
L L S+ S +G+ G V G+M F +A + ++ PGI E+LI+ +GL
Sbjct: 127 EYGLGSLASIGSVAPYIGLFGTVWGIMNAFIGLAAVDQVTLATVAPGIAEALIATAIGLF 186
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
+IP+ +A+N F S+ FA E A+L RQ+ G+
Sbjct: 187 AAIPAVLAFNHFTSKSESVYSDRALFAEEMIALLQRQSVGS 227
>gi|293609861|ref|ZP_06692163.1| hypothetical protein HMPREF0013_02011 [Acinetobacter sp. SH024]
gi|292828313|gb|EFF86676.1| hypothetical protein HMPREF0013_02011 [Acinetobacter sp. SH024]
Length = 232
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 114/221 (51%), Gaps = 5/221 (2%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+ I L +Q V+ ++ +L + SI SW +I + +++ + F+++FWSG L
Sbjct: 9 LHISDLILQASPVVQLVMLILLLASIFSWYLIAKLHMSYKKAHQDDEHFQKMFWSGAELS 68
Query: 71 TVCKSLK-NHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQ-DRIDRMMDVAIARELEEI 128
T+ + + N GL IF +SE+ K K ++P+ + +R++ V ++R+ +
Sbjct: 69 TLYNNAQLNSKRSGLEDIFYQGLSEFFKL--KKRQAPVSQTIEGTERILHVGLSRDQSHL 126
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLC 187
L L S+ S +G+ G V G+M F +A + ++ PGI E+LI+ +GL
Sbjct: 127 EYGLGTLASIGSVAPYIGLFGTVWGIMNAFIGLAAVDQVTLATVAPGIAEALIATAIGLF 186
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
+IP+ +A+N F S+ FA E A+L RQ+ G+
Sbjct: 187 AAIPAVLAFNHFTAKSESVYSDRALFAEEMIALLQRQSVGS 227
>gi|42521815|ref|NP_967195.1| adventurous gliding motility protein X [Bdellovibrio bacteriovorus
HD100]
gi|39574345|emb|CAE77849.1| Adventurous gliding motility protein X [Bdellovibrio bacteriovorus
HD100]
Length = 245
Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 108/215 (50%), Gaps = 10/215 (4%)
Query: 19 QMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKN 78
Q V+ + +L + S+ W++ K V F +++ F FW SL+T+ + +
Sbjct: 27 QASPIVQLTLLMLIVMSVFCWAIGYSKYVTFKNMKQSDELFLSKFWKVNSLDTLFEDIDQ 86
Query: 79 HHNIGLAAIFMSAMSEWKK-------SCDKGARSPIGIQDRIDRMMDVAIARELEEITEK 131
+ + +A +F + E KK S +G + + D ++R+++ A E+ ++ +
Sbjct: 87 YKDSSVARVFKAVYLEMKKISESPLLSKTEGDKPILSGIDNLERVLNKATESEISKLESR 146
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGLCVS 189
L+ L + S G +G+ G V G+MG F I G S VV+ PGI E+LI+ +GL +
Sbjct: 147 LTVLATTGSTGPFIGLFGTVWGIMGSFHKIGQTGTASLAVVA-PGISEALIATAIGLATA 205
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
IP+ + YN FI +K + + F +F I+ R
Sbjct: 206 IPAVVLYNNFISKIRKQEIVLNNFGADFLNIVKRN 240
>gi|260551458|ref|ZP_05825642.1| hypothetical protein HMPREF0014_02656 [Acinetobacter sp. RUH2624]
gi|260405452|gb|EEW98945.1| hypothetical protein HMPREF0014_02656 [Acinetobacter sp. RUH2624]
Length = 232
Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 112/220 (50%), Gaps = 3/220 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+ I L +Q V+ ++ +L + SI SW +I + + + R+ F+++FWSG L
Sbjct: 9 LHISDLILQASPVVQLVMLILLLASIFSWYLIAKLHMGYKKARQGDEHFQKMFWSGAELN 68
Query: 71 TVCKSLK-NHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
T+ + + N GL IF +SE+ K + A + I+ +R++ V ++R+ +
Sbjct: 69 TLYNNAQLNSKRSGLEDIFYQGLSEFFKLKKRNASTSQTIEG-TERILRVGLSRDQGTLE 127
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCV 188
L L S+ S +G+ G V G+M F +A + ++ PGI E+LI+ +GL
Sbjct: 128 YGLGTLASIGSVAPYIGLFGTVWGIMNAFIGLAAVDQVTLATVAPGIAEALIATAIGLFA 187
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
+IP+ +A+N F + FA E A+L RQ+ G+
Sbjct: 188 AIPAVLAFNHFTAKGESVYSDRALFAEEMIALLQRQSVGS 227
>gi|83859803|ref|ZP_00953323.1| TolQ, tolQ protein [Oceanicaulis alexandrii HTCC2633]
gi|83852162|gb|EAP90016.1| TolQ, tolQ protein [Oceanicaulis alexandrii HTCC2633]
Length = 217
Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 103/215 (47%), Gaps = 14/215 (6%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
+++I LFM+ + VK ++ +L + SI SW++ I+K + FE FWSG SL
Sbjct: 14 ELTIMHLFMRADIVVKAVMAILALMSIWSWAIAIEKWMQLNKAHAGASRFENDFWSGGSL 73
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+ + + +AM +W + + REL ++
Sbjct: 74 DQLVTKYAKPAKEPFGRVLAAAMRDWDGYA-------------VAKSGGAEANRELNKME 120
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCV 188
L L + S+ +G+ G V G+M F+SIA + ++ V PGI E+L + LGL
Sbjct: 121 AGLGVLSIIGSSAPFIGLFGTVWGIMNAFRSIAASENTSLAVVAPGISEALFATALGLLA 180
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
+IP+ I +N + K+A ++EG ++ +A+ SR
Sbjct: 181 AIPAVIFFNALSSNLAKYAARLEGLVDDLAALASR 215
>gi|184159153|ref|YP_001847492.1| biopolymer transport protein [Acinetobacter baumannii ACICU]
gi|183210747|gb|ACC58145.1| Biopolymer transport protein [Acinetobacter baumannii ACICU]
Length = 232
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 113/220 (51%), Gaps = 3/220 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+ I L +Q V+ ++ +L + SI SW +I + +++ R+ F+++FWSG
Sbjct: 9 LHISDLILQASPVVQLVMLILLLASIFSWYLIAKLHMSYKKARQDDEHFQKMFWSGAEFN 68
Query: 71 TVCKSLK-NHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
T+ + + N GL IF +SE+ K + A + I+ +R++ V ++R+ +
Sbjct: 69 TLYNNAQLNSKRSGLEDIFYQGLSEFFKLKKRQAPTSQMIEG-TERILRVGLSRDQGSLE 127
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCV 188
L L S+ S +G+ G V G+M F +A + ++ PGI E+LI+ +GL
Sbjct: 128 YGLGTLASIGSVAPYIGLFGTVWGIMNAFIGLAAVDQVTLATVAPGIAEALIATAIGLFA 187
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
+IP+ +A+N F S+ FA E A+L RQ+ G+
Sbjct: 188 AIPAVLAFNHFTAKSESVYSDRALFAEEMIALLQRQSVGS 227
>gi|333021096|gb|EGK40353.1| protein TolQ [Shigella flexneri K-227]
Length = 210
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 102/198 (51%), Gaps = 3/198 (1%)
Query: 30 LLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHN--IGLAAI 87
+L FSI SW++IIQ++ R+ FE FWSG L + + + + G I
Sbjct: 3 ILIGFSITSWAIIIQRTRILNAAAREAEAFEDKFWSGIELSRLYQESQGKRDNLTGSEQI 62
Query: 88 FMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGI 147
F S E+ + + +P + + R M +++ RELE + + FLG++ S +G+
Sbjct: 63 FYSGFKEFVRLHRANSHAPEAVVEGASRAMRISMNRELENLETHIPFLGTVGSISPYIGL 122
Query: 148 LGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCVSIPSSIAYNKFIEDSKKF 206
G V G+M F ++ + + PGI E+LI+ +GL +IP+ +AYN+ + K
Sbjct: 123 FGTVWGIMHAFIALGAVKQATLQMVAPGIAEALIATAIGLFAAIPAVMAYNRLNQRVNKL 182
Query: 207 AMQMEGFANEFSAILSRQ 224
+ + F EF+AIL RQ
Sbjct: 183 ELNYDNFMEEFTAILHRQ 200
>gi|153838036|ref|ZP_01990703.1| protein TolQ [Vibrio parahaemolyticus AQ3810]
gi|149748570|gb|EDM59429.1| protein TolQ [Vibrio parahaemolyticus AQ3810]
Length = 186
Score = 95.9 bits (237), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 89/171 (52%), Gaps = 5/171 (2%)
Query: 58 EFEQLFWSGQSLETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDR 115
+FE FWSG L + + +K + G IF + +E+ + A SP I + R
Sbjct: 6 QFEDKFWSGTDLSQLYQKVKGRKDEIAGTEEIFYAGFTEFARLRKSNANSPAYIMEGTGR 65
Query: 116 MMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI--P 173
M VA+ARE++E+ L FL ++ S +G+ G V G+M F ++ G +S+ P
Sbjct: 66 AMRVAVAREVDELETSLPFLATVGSISPYIGLFGTVWGIMHAFIAL-GEVKQATLSMVAP 124
Query: 174 GIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
GI E+LI+ +GL +IP+ +AYN+ K F+ EF +IL RQ
Sbjct: 125 GIAEALIATAMGLFAAIPAVMAYNRLSNKVSKLEHTYATFSEEFHSILHRQ 175
>gi|312970816|ref|ZP_07784995.1| protein TolQ [Escherichia coli 1827-70]
gi|310336577|gb|EFQ01744.1| protein TolQ [Escherichia coli 1827-70]
gi|313649620|gb|EFS14044.1| protein TolQ [Shigella flexneri 2a str. 2457T]
gi|315614613|gb|EFU95255.1| protein TolQ [Escherichia coli 3431]
gi|320172960|gb|EFW48188.1| MotA/TolQ/ExbB proton channel family protein [Shigella dysenteriae
CDC 74-1112]
gi|320179422|gb|EFW54379.1| MotA/TolQ/ExbB proton channel family protein [Shigella boydii ATCC
9905]
gi|320183979|gb|EFW58803.1| MotA/TolQ/ExbB proton channel family protein [Shigella flexneri CDC
796-83]
gi|320198143|gb|EFW72747.1| MotA/TolQ/ExbB proton channel family protein [Escherichia coli
EC4100B]
gi|323158789|gb|EFZ44802.1| protein TolQ [Escherichia coli E128010]
gi|323180023|gb|EFZ65579.1| protein TolQ [Escherichia coli 1180]
gi|323185102|gb|EFZ70468.1| protein TolQ [Escherichia coli 1357]
gi|323191082|gb|EFZ76347.1| protein TolQ [Escherichia coli RN587/1]
gi|332093798|gb|EGI98852.1| protein TolQ [Shigella boydii 5216-82]
gi|332760895|gb|EGJ91183.1| protein TolQ [Shigella flexneri 4343-70]
gi|332761220|gb|EGJ91506.1| protein TolQ [Shigella flexneri 2747-71]
gi|333007852|gb|EGK27328.1| protein TolQ [Shigella flexneri K-218]
gi|333010144|gb|EGK29579.1| protein TolQ [Shigella flexneri K-272]
gi|333021416|gb|EGK40666.1| protein TolQ [Shigella flexneri K-304]
Length = 210
Score = 95.9 bits (237), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 102/198 (51%), Gaps = 3/198 (1%)
Query: 30 LLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHN--IGLAAI 87
+L FSI SW++IIQ++ R+ FE FWSG L + + + + G I
Sbjct: 3 ILIGFSIASWAIIIQRTRILNAAAREAEAFEDKFWSGIELSRLYQESQGKRDNLTGSEQI 62
Query: 88 FMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGI 147
F S E+ + + +P + + R M +++ RELE + + FLG++ S +G+
Sbjct: 63 FYSGFKEFVRLHRANSHAPEAVVEGASRAMRISMNRELENLETHIPFLGTVGSISPYIGL 122
Query: 148 LGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCVSIPSSIAYNKFIEDSKKF 206
G V G+M F ++ + + PGI E+LI+ +GL +IP+ +AYN+ + K
Sbjct: 123 FGTVWGIMHAFIALGAVKQATLQMVAPGIAEALIATAIGLFAAIPAVMAYNRLNQRVNKL 182
Query: 207 AMQMEGFANEFSAILSRQ 224
+ + F EF+AIL RQ
Sbjct: 183 ELNYDNFMEEFTAILHRQ 200
>gi|30248239|ref|NP_840309.1| MotA/TolQ/ExbB proton channel family protein [Nitrosomonas europaea
ATCC 19718]
gi|30180124|emb|CAD84126.1| MotA/TolQ/ExbB proton channel family [Nitrosomonas europaea ATCC
19718]
Length = 234
Score = 95.9 bits (237), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 110/221 (49%), Gaps = 11/221 (4%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLR---RQFREFEQLFWSG 66
D+S F L L V+ ++ LL + S +SW I +K TLR +Q EFE +FW G
Sbjct: 8 DLSFFHLVSGASLPVQLVMLLLLLASFVSWWFIFRK---LFTLRQEIKQTDEFENIFWRG 64
Query: 67 QSLETVC-KSLKNHHNIG-LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARE 124
L + ++ H +G + IF + E+ K PI D M RE
Sbjct: 65 SDLNALYQRAAGARHAVGSMERIFEAGFREFTKYQSGVDIGPI--MDSTRGAMRAVYQRE 122
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISIL 183
++ + LSFL ++ S VG+ G V G+M F+ ++ + + PGI E+LI+
Sbjct: 123 MDRLESHLSFLATVGSVSPYVGLFGTVWGIMNAFRELSNVGQATIAHVAPGIAEALIATA 182
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+GL +IP+ IAYN++ D+ + A + E F E S +L R+
Sbjct: 183 MGLFAAIPAVIAYNRYASDTAQLATRYESFIEEVSNVLQRR 223
>gi|256828397|ref|YP_003157125.1| MotA/TolQ/ExbB proton channel [Desulfomicrobium baculatum DSM 4028]
gi|256577573|gb|ACU88709.1| MotA/TolQ/ExbB proton channel [Desulfomicrobium baculatum DSM 4028]
Length = 263
Score = 95.9 bits (237), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 106/198 (53%), Gaps = 4/198 (2%)
Query: 24 VKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIG 83
V+ ++TLL I S++SWS+I K + RR+ LF + +L ++L+ N
Sbjct: 50 VQGVMTLLAIMSLISWSIIFFKIIQINVGRRKALRERALFQNATNLADGVQTLREQGNSA 109
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQ---DRIDRMMDVAIARELEEITEKLSFLGSMSS 140
L I + E+++ + + D + R+++ ++ L E++ LSFL + ++
Sbjct: 110 LYPIAKRGLQEFRRLEQSVIHPNLKFRVAGDNLRRVLEQGVSEGLGEMSRSLSFLATCAN 169
Query: 141 AGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCVSIPSSIAYNKF 199
A +G+ G V G+M F +I + + ++ PGI E+L++ +GL V+IP++IAYN F
Sbjct: 170 AAPFIGLFGTVWGIMNSFHAIGQMKTAALAAVAPGISEALVATAIGLAVAIPATIAYNTF 229
Query: 200 IEDSKKFAMQMEGFANEF 217
+ +ME FA+EF
Sbjct: 230 LGMITTVHTEMECFASEF 247
>gi|207744080|ref|YP_002260472.1| tolq-related transport (c-terminal fragment) transmembrane protein
[Ralstonia solanacearum IPO1609]
gi|206595484|emb|CAQ62411.1| probable tolq-related transport (c-terminal fragment) transmembrane
protein [Ralstonia solanacearum IPO1609]
Length = 170
Score = 95.5 bits (236), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 84/161 (52%), Gaps = 3/161 (1%)
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCD--KGARSPIGIQDRIDRMMDVAIARELE 126
L + +HH L IF + M E+ K+ + +G P I D R M A RE++
Sbjct: 10 LRHHIPKVPSHHTGALERIFEAGMREFLKTREQQRGIGDPSAILDASRRAMRAAYQREMD 69
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLG 185
+ L FL S+ S +G+ G V G+M F+ ++ + ++ PGI E+L++ +G
Sbjct: 70 SLESHLPFLASVGSVSPYIGLFGTVWGIMNAFRGLSNVQQATLSAVAPGIAEALVATAIG 129
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
L +IP+ IAYN++ + + A + E F EFS IL RQT
Sbjct: 130 LFAAIPAVIAYNRYATEMDRLANRFESFMEEFSNILQRQTR 170
>gi|330954684|gb|EGH54944.1| tolQ protein [Pseudomonas syringae Cit 7]
Length = 236
Score = 95.5 bits (236), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 109/220 (49%), Gaps = 3/220 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
++I+ L L VK ++ +L + S++SW +IIQ+S+ R F+Q F S L
Sbjct: 8 MTIWGLISDASLLVKAVMLILLLASLVSWYLIIQRSLVLRHYERSLDAFQQRFRSAADLA 67
Query: 71 TVCK--SLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ S G+ +F + +E+ + + P + ++R + VAI+ + ++
Sbjct: 68 PLQAQASSAQRDATGIEDVFQAGYAEYMQLKQRPGIEPDVVLSGVERSLQVAISEQELQL 127
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLC 187
+ L FL ++ S +G+ G V G+M F ++ + ++ PGI E+LI+ +GL
Sbjct: 128 EKGLQFLATVGSVSPYIGLFGTVWGIMNSFIGLSQVQQATLSTVAPGIAEALIATAIGLF 187
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEG 227
+IP+ +AYN+F + + F NE L+R +G
Sbjct: 188 AAIPAVVAYNRFAARGQTLTARYYSFGNELQVRLNRTLQG 227
>gi|85713413|ref|ZP_01044410.1| TonB system biopolymer transport component [Idiomarina baltica
OS145]
gi|85692763|gb|EAQ30764.1| TonB system biopolymer transport component [Idiomarina baltica
OS145]
Length = 234
Score = 95.5 bits (236), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 115/227 (50%), Gaps = 11/227 (4%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
++S LF+Q L VK ++ +L S+ W +I Q+ +FE FWSG L
Sbjct: 4 ELSFIDLFLQASLLVKLVMLMLLAMSVWGWVLIFQRKKVIGQAHSDALKFEDRFWSGVDL 63
Query: 70 ETVCK--SLKNHHNIGLAAIFMSAMSEWKK-SCDKGARSPIGIQDRID---RMMDVAIAR 123
+ + S + ++ G+ +F + E+ + S A S Q R++ R M VA AR
Sbjct: 64 ARLYQEISARAKNSRGMELLFHAGFKEFARLSNHDNADS----QTRVEGAFRAMRVAHAR 119
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISI 182
ELE++ L L ++ S +G+ G V G+M F ++ + + PGI E+LI+
Sbjct: 120 ELEKLDANLGILATIGSISPYIGLFGTVWGIMNAFIALGAVKQATLAMVAPGIAEALIAT 179
Query: 183 LLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNI 229
+GL +IP+ IAYN+F +K Q F +EF AIL RQ+ N+
Sbjct: 180 AMGLFAAIPAVIAYNRFTNRVEKVDNQYMNFIDEFVAILQRQSLSNV 226
>gi|15595395|ref|NP_248889.1| transport protein ExbB [Pseudomonas aeruginosa PAO1]
gi|107099188|ref|ZP_01363106.1| hypothetical protein PaerPA_01000198 [Pseudomonas aeruginosa PACS2]
gi|116053917|ref|YP_788355.1| transport protein ExbB [Pseudomonas aeruginosa UCBPP-PA14]
gi|152985469|ref|YP_001345676.1| transport protein ExbB [Pseudomonas aeruginosa PA7]
gi|218888943|ref|YP_002437807.1| transport protein ExbB [Pseudomonas aeruginosa LESB58]
gi|254237565|ref|ZP_04930888.1| transport protein ExbB [Pseudomonas aeruginosa C3719]
gi|254243305|ref|ZP_04936627.1| transport protein ExbB [Pseudomonas aeruginosa 2192]
gi|296386686|ref|ZP_06876185.1| transport protein ExbB [Pseudomonas aeruginosa PAb1]
gi|313112225|ref|ZP_07797999.1| transport protein ExbB [Pseudomonas aeruginosa 39016]
gi|6118339|gb|AAF04083.1|AF190125_2 ExbB [Pseudomonas aeruginosa]
gi|9946033|gb|AAG03587.1|AE004458_2 transport protein ExbB [Pseudomonas aeruginosa PAO1]
gi|115589138|gb|ABJ15153.1| transport protein ExbB [Pseudomonas aeruginosa UCBPP-PA14]
gi|126169496|gb|EAZ55007.1| transport protein ExbB [Pseudomonas aeruginosa C3719]
gi|126196683|gb|EAZ60746.1| transport protein ExbB [Pseudomonas aeruginosa 2192]
gi|150960627|gb|ABR82652.1| transport protein ExbB [Pseudomonas aeruginosa PA7]
gi|218769166|emb|CAW24926.1| transport protein ExbB [Pseudomonas aeruginosa LESB58]
gi|310884501|gb|EFQ43095.1| transport protein ExbB [Pseudomonas aeruginosa 39016]
Length = 239
Score = 95.5 bits (236), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 104/195 (53%), Gaps = 4/195 (2%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIG-- 83
+I LL FS+++W + + K V F +RQ R+F++ FWS SL++ + ++ G
Sbjct: 14 AVIWLLVGFSVVTWGLALVKGVQFARQKRQDRQFQKQFWSATSLDSAGEQAQDKQGAGAR 73
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
+A +A+ A+S I QDR++R + I RE + L+ L S+ S
Sbjct: 74 VAQAGFAAIQVQDNGQPDLAQS-INHQDRLERALRQQIQRERRSLESGLAVLASIGSTSP 132
Query: 144 LVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIES-LISILLGLCVSIPSSIAYNKFIED 202
+G+ G V G+M + I+ S ++ ++ G I S LI+ +G+ V++P+ + YN F+
Sbjct: 133 FIGLFGTVWGIMEALKGISAAGSASLETVAGPIGSALIATGVGIAVAVPAVLVYNYFLRR 192
Query: 203 SKKFAMQMEGFANEF 217
K A ++ FA++F
Sbjct: 193 LKLTAADLDDFAHDF 207
>gi|49082190|gb|AAT50495.1| PA0198 [synthetic construct]
Length = 240
Score = 95.1 bits (235), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 104/195 (53%), Gaps = 4/195 (2%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIG-- 83
+I LL FS+++W + + K V F +RQ R+F++ FWS SL++ + ++ G
Sbjct: 14 AVIWLLVGFSVVTWGLALVKGVQFARQKRQDRQFQKQFWSATSLDSAGEQAQDKQGAGAR 73
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
+A +A+ A+S I QDR++R + I RE + L+ L S+ S
Sbjct: 74 VAQAGFAAIQVQDNGQPDLAQS-INHQDRLERALRQQIQRERRSLGSGLAVLASIGSTSP 132
Query: 144 LVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIES-LISILLGLCVSIPSSIAYNKFIED 202
+G+ G V G+M + I+ S ++ ++ G I S LI+ +G+ V++P+ + YN F+
Sbjct: 133 FIGLFGTVWGIMEALKGISAAGSASLETVAGPIGSALIATGVGIAVAVPAVLVYNYFLRR 192
Query: 203 SKKFAMQMEGFANEF 217
K A ++ FA++F
Sbjct: 193 LKLTAADLDDFAHDF 207
>gi|326622471|gb|EGE28816.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Dublin str. 3246]
Length = 210
Score = 95.1 bits (235), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 102/198 (51%), Gaps = 3/198 (1%)
Query: 30 LLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNI--GLAAI 87
+L FSI SW++IIQ++ R+ FE FWSG L + + + + G I
Sbjct: 3 ILIGFSIASWAIIIQRTRILNAAAREAEAFEDKFWSGIELSRLYQESQGRRDSLSGSEQI 62
Query: 88 FMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGI 147
F S E+ + + +P + + R M +++ RELE + + FLG++ S +G+
Sbjct: 63 FYSGFKEFVRLHRANSHAPEAVVEGASRAMRISMNRELETLETHIPFLGTVGSISPYIGL 122
Query: 148 LGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCVSIPSSIAYNKFIEDSKKF 206
G V G+M F ++ + + PGI E+LI+ +GL +IP+ +AYN+ + K
Sbjct: 123 FGTVWGIMHAFIALGAVKQATLQMVAPGIAEALIATAIGLFAAIPAVMAYNRLNQRVNKL 182
Query: 207 AMQMEGFANEFSAILSRQ 224
+ + F EF+AIL RQ
Sbjct: 183 ELNYDNFMEEFTAILHRQ 200
>gi|299139859|ref|ZP_07033031.1| MotA/TolQ/ExbB proton channel [Acidobacterium sp. MP5ACTX8]
gi|298598213|gb|EFI54379.1| MotA/TolQ/ExbB proton channel [Acidobacterium sp. MP5ACTX8]
Length = 249
Score = 94.7 bits (234), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 118/223 (52%), Gaps = 13/223 (5%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG----- 66
SI L+ QMG KC++ +LFI SI S +VII +++ F R+Q REF
Sbjct: 31 SIPQLWAQMGWPAKCVVIILFIMSIWSLAVIIDRALYFSAARKQSREFAPKVAGALKEGR 90
Query: 67 --QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARE 124
++++ +S K+H LA + + +SE++ GA +P ++ R ++ A +
Sbjct: 91 LDEAIKVADRSKKSH----LAEVVTAGLSEFRSFGSGGAITPEQVESS-KRALERAESIT 145
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISIL 183
++ + LS L ++ S +G+ G V+G++ F+SIA S+ + + GI E+L++
Sbjct: 146 HAKLKKGLSGLATIGSTAPFIGLFGTVIGILNAFRSIASSKSSGIGQVAGGISEALVTTA 205
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
GL V+IP+ + +N F + F ++M+ ++E +Q+
Sbjct: 206 FGLLVAIPAVMCFNYFTSKVEAFDVEMDNSSSELVDYFIKQSH 248
>gi|28870405|ref|NP_793024.1| tolQ protein [Pseudomonas syringae pv. tomato str. DC3000]
gi|213969870|ref|ZP_03398004.1| tolQ protein [Pseudomonas syringae pv. tomato T1]
gi|301386269|ref|ZP_07234687.1| tolQ protein [Pseudomonas syringae pv. tomato Max13]
gi|302063955|ref|ZP_07255496.1| tolQ protein [Pseudomonas syringae pv. tomato K40]
gi|302135263|ref|ZP_07261253.1| tolQ protein [Pseudomonas syringae pv. tomato NCPPB 1108]
gi|28853652|gb|AAO56719.1| tolQ protein [Pseudomonas syringae pv. tomato str. DC3000]
gi|213925418|gb|EEB58979.1| tolQ protein [Pseudomonas syringae pv. tomato T1]
Length = 236
Score = 94.7 bits (234), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 111/221 (50%), Gaps = 3/221 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
++++ L L VK ++ +L + S++SW +I+Q+S+ R F+Q F S L
Sbjct: 7 HMTVWGLISDASLLVKAVMLILLLASLVSWFLIVQRSLALRHYERSLDAFQQRFRSEAEL 66
Query: 70 ETVCK--SLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ S + G+ +IF + +E+ + + P + ++R + VAI+ + +
Sbjct: 67 APLYAQASSAQSDSGGIGSIFQAGYAEYMQLKHRPGIDPDVVLSGVERSLQVAISEQELQ 126
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ + L FL ++ S +G+ G V G+M F ++ + ++ PGI E+LI+ +GL
Sbjct: 127 LEKGLQFLATVGSVSPYIGLFGTVWGIMNSFIGLSQVQQATLSTVAPGIAEALIATAIGL 186
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEG 227
+IP+ IAYN+F + + F NE L+R +G
Sbjct: 187 FAAIPAVIAYNRFAARGQTLTARYYTFGNELQVRLNRTLQG 227
>gi|330968208|gb|EGH68468.1| tolQ protein [Pseudomonas syringae pv. actinidiae str. M302091]
Length = 236
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 111/221 (50%), Gaps = 3/221 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
++++ L L VK ++ +L + S++SW +I+Q+S+ R F+Q F S L
Sbjct: 7 HMTVWGLVSDASLLVKAVMLILLLASLVSWFLIVQRSLALRHYERSLDAFQQRFRSEAEL 66
Query: 70 ETVCK--SLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ S + G+ +IF + +E+ + + P + ++R + VAI+ + +
Sbjct: 67 APLYAQASSAQSDSGGIGSIFQAGYAEYVQLKHRPGIDPDVVLSGVERSLQVAISEQELQ 126
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ + L FL ++ S +G+ G V G+M F ++ + ++ PGI E+LI+ +GL
Sbjct: 127 LEKGLQFLATVGSVSPYIGLFGTVWGIMNSFIGLSQVQQATLSTVAPGIAEALIATAIGL 186
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEG 227
+IP+ IAYN+F + + F NE L+R +G
Sbjct: 187 FAAIPAVIAYNRFAARGQTLTARYYTFGNELQVRLNRTLQG 227
>gi|302189466|ref|ZP_07266139.1| tolQ protein [Pseudomonas syringae pv. syringae 642]
Length = 236
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 109/221 (49%), Gaps = 3/221 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
++I+ L L VK ++ +L + S++SW +IIQ+S+ R F+Q F S L
Sbjct: 7 HMTIWGLISDASLLVKAVMLILLLASLVSWFLIIQRSLALRHYERSMDAFQQRFRSAAEL 66
Query: 70 ETVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + G+ +F + +E+ + + P + ++R + VAI+ + +
Sbjct: 67 APLQAQASSAQRDAGGIGEVFAAGYAEYLQLKQRPGIEPDVVLSGVERSLQVAISEQELQ 126
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ + L FL ++ S +G+ G V G+M F ++ + ++ PGI E+LI+ +GL
Sbjct: 127 LEKGLQFLATVGSVSPYIGLFGTVWGIMNSFIGLSQVQQATLSTVAPGIAEALIATAIGL 186
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEG 227
+IP+ IAYN+F + + F NE L+R +G
Sbjct: 187 FAAIPAVIAYNRFAARGQTLTARYYSFGNELQVRLNRTLQG 227
>gi|254284318|ref|ZP_04959286.1| protein TolQ [gamma proteobacterium NOR51-B]
gi|219680521|gb|EED36870.1| protein TolQ [gamma proteobacterium NOR51-B]
Length = 234
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 99/200 (49%), Gaps = 12/200 (6%)
Query: 35 SILSWSVIIQKSVNFITLRRQ---FREFEQLFWSGQSLETVCKSLKNHHN-----IGLAA 86
S+ SW +I+Q+ I LRR +FE+ FWSG L + + N G+ +
Sbjct: 29 SVTSWYMIVQR---MILLRRTDDALLDFEEQFWSGVDLAELYREGNQAVNDGQPPTGIES 85
Query: 87 IFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVG 146
IF + E+ + + + + R M VA RE + + L FL S+ S +G
Sbjct: 86 IFRAGFKEFSRLSQQSDIDADAVLEGARRAMRVATLREGDRLEMHLPFLASVGSTSPYIG 145
Query: 147 ILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCVSIPSSIAYNKFIEDSKK 205
+ G V G+M F+ +A + ++ PGI E+LI+ +GL +IP+ +AYN+F
Sbjct: 146 LFGTVWGIMHSFRGLANATQATLAAVAPGISEALIATAMGLFAAIPAVLAYNRFAARVDG 205
Query: 206 FAMQMEGFANEFSAILSRQT 225
+ + F +EFS IL RQ+
Sbjct: 206 LINRYDTFVDEFSGILQRQS 225
>gi|255320818|ref|ZP_05361993.1| protein TolQ [Acinetobacter radioresistens SK82]
gi|262379407|ref|ZP_06072563.1| TolQ [Acinetobacter radioresistens SH164]
gi|255302195|gb|EET81437.1| protein TolQ [Acinetobacter radioresistens SK82]
gi|262298864|gb|EEY86777.1| TolQ [Acinetobacter radioresistens SH164]
Length = 232
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 111/219 (50%), Gaps = 3/219 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+ I L +Q V+ ++ +L + SI SW +I + ++ ++ F+++FWSG L
Sbjct: 9 LHISDLILQASPVVQLVMLILLLASIYSWYLIAKLYMSHKKAQKDDEHFQKMFWSGAELN 68
Query: 71 TVCKSLK-NHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
T+ + + N GL IF + E+ K + A + I+ +R++ V ++R+ +
Sbjct: 69 TLYNNAQLNSKRSGLEDIFYQGLGEFFKLNKRHASTTQSIEG-TERILRVGLSRDQGNLE 127
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCV 188
+ L L S+ S +G+ G V G+M F +A + ++ PGI E+LI+ +GL
Sbjct: 128 QGLGALASIGSVAPYIGLFGTVWGIMNAFIGLAAVDQVTLATVAPGIAEALIATAIGLFA 187
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEG 227
+IP+ +A+N F + FA E A+L RQ+ G
Sbjct: 188 AIPAVLAFNHFTAKGEALYSDRALFAEEMVALLQRQSVG 226
>gi|330875931|gb|EGH10080.1| tolQ protein [Pseudomonas syringae pv. morsprunorum str. M302280PT]
Length = 236
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 110/221 (49%), Gaps = 3/221 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
++++ L L VK ++ +L + S++SW +I+Q+S+ R F+Q F S L
Sbjct: 7 HMTVWGLISDASLLVKAVMLILLLASLVSWFLIVQRSLALRHYERSLDAFQQRFRSEAEL 66
Query: 70 ETVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + + G+ +F + +E+ + + P + ++R + VAI+ + +
Sbjct: 67 APLYAQASSAQSDSGGIGPVFQAGYAEYMQLKHRPGIDPDVVLSGVERSLQVAISEQELQ 126
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ + L FL ++ S +G+ G V G+M F ++ + ++ PGI E+LI+ +GL
Sbjct: 127 LEKGLQFLATVGSVSPYIGLFGTVWGIMNSFIGLSQVQQATLSTVAPGIAEALIATAIGL 186
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEG 227
+IP+ IAYN+F + + F NE L+R +G
Sbjct: 187 FAAIPAVIAYNRFAARGQTLTARYYTFGNELQVRLNRTLQG 227
>gi|148284677|ref|YP_001248767.1| transport protein [Orientia tsutsugamushi str. Boryong]
gi|146740116|emb|CAM80289.1| transport protein [Orientia tsutsugamushi str. Boryong]
Length = 229
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 113/218 (51%), Gaps = 1/218 (0%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
ISI + F+ + K ++ L I SI SW++I K +F ++++ F +L S Q +
Sbjct: 10 QISIISAFLSADIICKTVMVTLIIASIWSWAIIFYKYYHFNNIKKEINTFNKLLQSNQQV 69
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+ + + ++ ++++ ++E+K + A + ++DR+ +++ + E++
Sbjct: 70 DELYSKINKNNGNSISSMLTIVLNEYKYEHNVTAGNNSNLKDRLLYTIELTKNQISEQLE 129
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCV 188
L L ++SS +G+LG V G+M FQ+IA + ++ V PGI E+L++ +GL
Sbjct: 130 TYLIVLATISSTAPFIGLLGTVWGIMHSFQAIAATKNTSIAVVAPGIAEALLATAIGLFA 189
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ I YN ++E F +F +L + +
Sbjct: 190 AIPAGIFYNILTHKLSLVESKLENFIRKFYTVLCKTID 227
>gi|262193461|ref|YP_003264670.1| protein TolQ [Haliangium ochraceum DSM 14365]
gi|262076808|gb|ACY12777.1| protein TolQ [Haliangium ochraceum DSM 14365]
Length = 232
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 104/216 (48%), Gaps = 2/216 (0%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+ + +L +Q VK ++ LL + SI+ W +I K ++ ++ +F + FW + +E
Sbjct: 14 LDLASLILQAHWVVKAVMALLALMSIIGWYIIGSKHIHIRRATKESNKFLESFWRTRDIE 73
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKK--SCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ K K N ++A+F++ +E K + ++ R + ++R + E ++
Sbjct: 74 QIYKQAKGLQNSPISAMFLAGYTELAKLEADERPTRDKEADLENVERALRRTQTIETTKL 133
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCV 188
+ FL + SA +G+ G V G+M F S+ +N PGI E+L + +GL
Sbjct: 134 ENMIPFLATTGSAAPFIGLFGTVWGIMNSFTSLGSGAANIQTVAPGIAEALFATAIGLVA 193
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+IP+ +AYN F + M F ++ I+ R
Sbjct: 194 AIPAVMAYNYFTRRIRIQVSHMNTFEQDYLNIIRRH 229
>gi|83593490|ref|YP_427242.1| MotA/TolQ/ExbB proton channel [Rhodospirillum rubrum ATCC 11170]
gi|83576404|gb|ABC22955.1| MotA/TolQ/ExbB proton channel [Rhodospirillum rubrum ATCC 11170]
Length = 296
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/197 (35%), Positives = 101/197 (51%), Gaps = 15/197 (7%)
Query: 7 AIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG 66
A+ D S LF+Q VK ++ LL + SI W+VI+ K+V + RR+ R FE+ +
Sbjct: 76 ALHDFSALGLFLQADPVVKGVMGLLVVASIAVWAVILDKAVRLVIARREARAFERAV-AA 134
Query: 67 QSLETVCKSLKNHHNIGLA-AIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
L V LK G+A + SA W+ ARS +D I+R M + + EL
Sbjct: 135 NDLSAVM--LKG----GMATTVVRSAHEAWQDYQPGEARSV--RRDGIERAMRLTVNAEL 186
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV---VSIPGIIESLISI 182
++ L L S+ SA VG+ G V G+M F SIA SN+ V PGI E+L +
Sbjct: 187 RKLEVGLPLLASVGSAAPFVGLFGTVWGIMHSFTSIA--QSNDTSLAVVAPGIAEALFAT 244
Query: 183 LLGLCVSIPSSIAYNKF 199
+GL +IP+ +A+N
Sbjct: 245 AIGLVAAIPAVLAFNAL 261
>gi|114330313|ref|YP_746535.1| MotA/TolQ/ExbB proton channel [Nitrosomonas eutropha C91]
gi|114307327|gb|ABI58570.1| Cell division and transport-associated protein TolQ [Nitrosomonas
eutropha C91]
Length = 234
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 96/196 (48%), Gaps = 11/196 (5%)
Query: 35 SILSWSVIIQKSVNFITLR---RQFREFEQLFWSGQSLETVC-KSLKNHHNIG-LAAIFM 89
S +SW I +K TLR +Q EFE +FW G L + ++ H G + IF
Sbjct: 33 SFISWWFIFRK---LFTLRQEIKQTDEFESVFWRGSDLNALYQRAASARHAAGSMERIFE 89
Query: 90 SAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILG 149
+ E+ K PI D M RE++ + LSFL ++ S VG+ G
Sbjct: 90 AGFREFTKYQSGIDIGPI--MDSTRGAMRAVYQREMDRLESHLSFLATVGSVSPYVGLFG 147
Query: 150 AVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAM 208
V G+M F+ ++ + + PGI E+LI+ +GL +IP+ IAYN++ D+ + A
Sbjct: 148 TVWGIMNAFRELSNVGQATIAHVAPGIAEALIATAMGLFAAIPAVIAYNRYASDTAQLAT 207
Query: 209 QMEGFANEFSAILSRQ 224
+ E F E S +L R+
Sbjct: 208 RYESFIEEVSNVLQRR 223
>gi|262375575|ref|ZP_06068808.1| TolQ [Acinetobacter lwoffii SH145]
gi|262309829|gb|EEY90959.1| TolQ [Acinetobacter lwoffii SH145]
Length = 232
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 108/214 (50%), Gaps = 3/214 (1%)
Query: 16 LFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKS 75
L +Q V+ ++ L + SI SW +I + +++ + F+++FWSG L T+ +
Sbjct: 14 LILQASPVVQLVMLSLLLASIYSWYLIARLYMSYKKAQADDEHFQKIFWSGAELNTLYNN 73
Query: 76 LK-NHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSF 134
+ N GL IF + E+ K + A + I+ +R++ V ++R+ + + L
Sbjct: 74 AQLNSKRTGLEDIFYQGLGEFLKLKKRHAPTAQSIEG-TERILRVGLSRDQGHLEQGLGA 132
Query: 135 LGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCVSIPSS 193
L S+ S VG+ G V G+M F +A + ++ PGI E+LI+ +GL +IP+
Sbjct: 133 LASIGSVAPYVGLFGTVWGIMNAFIGLADVDQVTLATVAPGIAEALIATAIGLFAAIPAV 192
Query: 194 IAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEG 227
+A+N F + FA E A+L RQ+ G
Sbjct: 193 LAFNHFTAKGETVYSDRALFAEEMVALLQRQSVG 226
>gi|251790231|ref|YP_003004952.1| MotA/TolQ/ExbB proton channel [Dickeya zeae Ech1591]
gi|247538852|gb|ACT07473.1| MotA/TolQ/ExbB proton channel [Dickeya zeae Ech1591]
Length = 232
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 106/200 (53%), Gaps = 6/200 (3%)
Query: 27 IITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAA 86
+I LL FS+++WS+ + K V + RR+ ++F QLFW ++++ + + H LA
Sbjct: 15 VILLLLFFSLVTWSIGLLKLVQYARHRRRNQQFRQLFWQQENIDAALRDVA--HPGALAN 72
Query: 87 IFMSAMSEWKKSCDKGARSPIG-IQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLV 145
+ + ++ D+ +PI +QDR++R + I RE + L+ L S+ + +
Sbjct: 73 LARATQLTLERVKDR--ITPIAHLQDRVERALQQQIQRERRTLETGLALLASIGTTSPFI 130
Query: 146 GILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCVSIPSSIAYNKFIEDSK 204
G+ G V G+M Q+I S + ++ G I +LI+ +G+ V++P+ + YN F+ K
Sbjct: 131 GLFGTVWGIMAALQTIGQSGSAGLDTVAGPIGNALIATGIGIAVAVPAVLIYNYFLRRLK 190
Query: 205 KFAMQMEGFANEFSAILSRQ 224
M+ FA++ ++ Q
Sbjct: 191 LEVADMDDFAHDIYSVAQAQ 210
>gi|330988188|gb|EGH86291.1| tolQ protein [Pseudomonas syringae pv. lachrymans str. M301315]
Length = 236
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 110/221 (49%), Gaps = 3/221 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
++I+ L L VK ++ +L + S++SW +IIQ+S+ R F+Q F + L
Sbjct: 7 HMTIWGLISDASLLVKAVMLILLLASLVSWYLIIQRSLALGHYERTLDAFQQRFRAEAEL 66
Query: 70 ETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ ++ G+ +F + +E+ + + P + ++R + VAI+ + +
Sbjct: 67 APLYSDSRSAQEGADGIERVFNAGYAEYVQLKPRPGIEPDVVLSGVERALQVAISEQELQ 126
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ + L FL ++ S +G+ G V G+M F ++ + ++ PGI E+LI+ +GL
Sbjct: 127 LEKGLQFLATVGSVSPYIGLFGTVWGIMNSFIGLSQVQQATLSTVAPGIAEALIATAIGL 186
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEG 227
+IP+ IAYN+F + + F NE L+R +G
Sbjct: 187 FAAIPAVIAYNRFAARGQTLTARYYSFGNELQVRLNRTLQG 227
>gi|310823645|ref|YP_003956003.1| adventurous gliding motility protein X [Stigmatella aurantiaca
DW4/3-1]
gi|309396717|gb|ADO74176.1| Adventurous gliding motility protein X [Stigmatella aurantiaca
DW4/3-1]
Length = 234
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 103/207 (49%), Gaps = 9/207 (4%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLA 85
++TLL S+ SW +I+ K+ R Q F FW LE + ++ + L+
Sbjct: 26 AVLTLLMGVSVASWGLIVMKATQLSRARSQSLTFLDTFWKATRLEGIYQTAQGLEGSPLS 85
Query: 86 AIF------MSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMS 139
+F +S +++ K+ D +G + ++R + A ++ E+ ++ FLG++
Sbjct: 86 KVFCAGYEELSKLAQAKEGTDGAMSDRLGGIENVERALHRAATTQITELEARVPFLGTVG 145
Query: 140 SAGLLVGILGAVLGMMGFFQSIA--GYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYN 197
+A VG+ G V+G++ F IA G + + V+ P + +L + GL +IP+ +AYN
Sbjct: 146 AAAPFVGLFGTVIGILNAFNEIADKGNATLSTVAAP-VGNALFATAAGLFAAIPAVVAYN 204
Query: 198 KFIEDSKKFAMQMEGFANEFSAILSRQ 224
F+ K F +M F+ +F I+ R
Sbjct: 205 SFVSRIKIFDTEMSNFSADFLNIIKRH 231
>gi|71735527|ref|YP_275169.1| tolQ protein [Pseudomonas syringae pv. phaseolicola 1448A]
gi|71556080|gb|AAZ35291.1| tolQ protein [Pseudomonas syringae pv. phaseolicola 1448A]
gi|320323664|gb|EFW79748.1| tolQ protein [Pseudomonas syringae pv. glycinea str. B076]
gi|320328302|gb|EFW84306.1| tolQ protein [Pseudomonas syringae pv. glycinea str. race 4]
gi|330878529|gb|EGH12678.1| tolQ protein [Pseudomonas syringae pv. glycinea str. race 4]
gi|330889788|gb|EGH22449.1| tolQ protein [Pseudomonas syringae pv. mori str. 301020]
Length = 236
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 110/221 (49%), Gaps = 3/221 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
++I+ L L VK ++ +L + S++SW +IIQ+S+ R F+Q F + L
Sbjct: 7 HMTIWGLISDASLLVKAVMLILLLASLVSWYLIIQRSLALGHYERTLDAFQQRFRAEAEL 66
Query: 70 ETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ ++ G+ +F + +E+ + + P + ++R + VAI+ + +
Sbjct: 67 APLYAESRSAQEGADGIERVFNAGYAEYVQLKPRPGIEPDVVLSGVERALQVAISEQELQ 126
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ + L FL ++ S +G+ G V G+M F ++ + ++ PGI E+LI+ +GL
Sbjct: 127 LEKGLQFLATVGSVSPYIGLFGTVWGIMNSFIGLSQVQQATLSTVAPGIAEALIATAIGL 186
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEG 227
+IP+ IAYN+F + + F NE L+R +G
Sbjct: 187 FAAIPAVIAYNRFAARGQTLTARYYSFGNELQVRLNRTLQG 227
>gi|330974473|gb|EGH74539.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. aceris str.
M302273PT]
Length = 242
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 103/199 (51%), Gaps = 9/199 (4%)
Query: 25 KCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGL 84
+I LL IFS+ +W + + K V F L+ Q R+F + FW+ SL++ + H G
Sbjct: 13 HAVIWLLVIFSVATWGLALLKGVQFSRLKSQDRKFHKQFWAASSLDSAAQ--LAHEQPGA 70
Query: 85 AAIFMSAMSEWKKSCDKGARS-----PIGIQDRIDRMMDVAIARELEEITEKLSFLGSMS 139
AA A + D GA++ I QDR++R + I RE + L+ L S+
Sbjct: 71 AARVALAGYAAIQVAD-GAQAHDLSQSINHQDRLERALRQQIVRERRSLETGLAILASIG 129
Query: 140 SAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCVSIPSSIAYNK 198
S +G+ G V G+M + I+ S ++ ++ G I +L++ +G+ V++P+ + YN
Sbjct: 130 STSPFIGLFGTVWGIMSALKGISAAGSASLETVAGPIGAALVATGVGIAVAVPAVLVYNY 189
Query: 199 FIEDSKKFAMQMEGFANEF 217
F+ K A ++ FA++F
Sbjct: 190 FLRRLKLTAADLDDFAHDF 208
>gi|300021817|ref|YP_003754428.1| MotA/TolQ/ExbB proton channel [Hyphomicrobium denitrificans ATCC
51888]
gi|299523638|gb|ADJ22107.1| MotA/TolQ/ExbB proton channel [Hyphomicrobium denitrificans ATCC
51888]
Length = 227
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 107/215 (49%), Gaps = 16/215 (7%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D++I LF + VKCII L S++ W++ +K + + R+ ++ E+ +G
Sbjct: 15 DLTILGLFQHADVVVKCIIVGLLSASVVCWAMTFEKLIRVWLVNREIKQLEKSSQTG--- 71
Query: 70 ETVCKSLKNHHNIGL-AAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+L + GL AI +A +EW + G+ + +DR++ M A R+L+ I
Sbjct: 72 -----TLPAAKSSGLIRAIIDAARTEWTEGAHDGSTGEV--RDRLEIAMRSATKRQLKGI 124
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
+ L FL ++ SA +G+ G V G+M F +IA ++ V PGI E+L + +GL
Sbjct: 125 EQGLPFLATLGSAAPFIGLFGTVWGIMNSFTAIAQSKDTSLAVVAPGIAEALFATAVGLA 184
Query: 188 VSIPSSIAYNKFI----EDSKKFAMQMEGFANEFS 218
+IP+ I YN+ + + A + G A S
Sbjct: 185 AAIPAVIFYNQITVALGRAADRAAPAIVGLARSLS 219
>gi|226939428|ref|YP_002794501.1| ExbB-like biopolymer transport [Laribacter hongkongensis HLHK9]
gi|226714354|gb|ACO73492.1| probable ExbB-like biopolymer transport [Laribacter hongkongensis
HLHK9]
Length = 224
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 111/219 (50%), Gaps = 12/219 (5%)
Query: 9 MDISIFALFMQMGLAVKC-IITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
MD+S L MQ G AV + LL S+ SW +I+Q+S+ L RQ R++ + FW+
Sbjct: 1 MDVS---LVMQQGDAVLIGVFALLLAMSLGSWWLILQRSLVLARLSRQARQWSRQFWAAD 57
Query: 68 SLETVCKSLKN---HHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARE 124
SL++ L H I A + + +++ + + G+ + + R + +A++RE
Sbjct: 58 SLDSARGQLDTPLPHARIATAG--LEGLDHYRQHAQRSLGAACGLDEFLVRTIRMALSRE 115
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA--GYYSNNVVSIPGIIESLISI 182
+ L++L ++ S VG+ G V G+ IA G S VS P I E+L++
Sbjct: 116 TGRLESGLTWLATVGSIAPFVGLFGTVWGIYHALVGIAAEGQVSIGTVSGP-IGEALVAT 174
Query: 183 LLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
GL +IP+ +AYN F ++ + M+ FA++ A L
Sbjct: 175 AAGLFAAIPAVVAYNAFTRVNRVLSQDMDSFAHDLHAQL 213
>gi|189183647|ref|YP_001937432.1| TolQ protein [Orientia tsutsugamushi str. Ikeda]
gi|189180418|dbj|BAG40198.1| TolQ protein [Orientia tsutsugamushi str. Ikeda]
Length = 229
Score = 92.8 bits (229), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 112/218 (51%), Gaps = 1/218 (0%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
ISI + F+ + K ++ L I SI SW++I K +F ++++ F +L S Q +
Sbjct: 10 QISIISAFLSADIICKTVMVTLIISSIWSWAIIFYKYYHFNNIKKEINTFNKLLQSNQQV 69
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+ + + ++ ++++ ++E K + A + ++DR+ +++ + E++
Sbjct: 70 DELYSKINKNNGNSISSMLTIVLNECKNEHNVTAGNNSNLKDRLLYTIELTKNQISEQLE 129
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCV 188
L L ++SS +G+LG V G+M FQ+IA + ++ V PGI E+L++ +GL
Sbjct: 130 TYLIVLATISSTAPFIGLLGTVWGIMHSFQAIAATKNTSIAVVAPGIAEALLATAIGLFA 189
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ I YN ++E F +F +L + +
Sbjct: 190 AIPAGIFYNILTHKVSLIENKLENFIRKFYTVLCKTID 227
>gi|39995139|ref|NP_951090.1| tolQ protein [Geobacter sulfurreducens PCA]
gi|39981901|gb|AAR33363.1| tolQ protein [Geobacter sulfurreducens PCA]
gi|298504169|gb|ADI82892.1| TolQ-related biopolymer transport membrane proton channel
[Geobacter sulfurreducens KN400]
Length = 225
Score = 92.8 bits (229), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 105/222 (47%), Gaps = 10/222 (4%)
Query: 16 LFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKS 75
LF GL VK ++ +L FS++SW++I K + + F FW + + +
Sbjct: 3 LFAGTGLVVKLVLVVLIFFSVVSWAIIFFKLLQINRANGESDRFLDFFWKTKRFDAISSQ 62
Query: 76 LKNHHNIGLAAIFMSAMSEWKKSCDKGAR---------SPIGIQDRIDRMMDVAIARELE 126
L N L+ +F +E ++ DKG + +G D I R + A E+
Sbjct: 63 LDRFGNSPLSVLFNEGYAELRRLLDKGGEQRDEPGVVSTDLGGIDNIARALRRATTSEIT 122
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLG 185
+ + ++FL + S +G+ G V G+M F+ I S ++ V PGI E+LI+ +G
Sbjct: 123 RLEKYVTFLATTGSTAPFIGLFGTVWGIMNAFKGIGETGSASLAVVAPGIAEALIATAIG 182
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEG 227
L +IP+ +AYN F K M+ F+ EF I+ R G
Sbjct: 183 LVAAIPAVMAYNHFQHKIKVLIASMDNFSTEFLNIVQRTFAG 224
>gi|257485271|ref|ZP_05639312.1| tolQ protein [Pseudomonas syringae pv. tabaci ATCC 11528]
Length = 236
Score = 92.8 bits (229), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 109/221 (49%), Gaps = 3/221 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
++I+ L L VK ++ +L + S++SW +IIQ+S+ R F+Q F + L
Sbjct: 7 HMTIWGLISDASLLVKAVMLILLLASLVSWYLIIQRSLALGHYERTLDAFQQRFRAEAEL 66
Query: 70 ETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
T+ + G+ +F + +E+ + + P + ++R + VAI+ + +
Sbjct: 67 ATLYAESHSAQEGADGIERVFNAGYAEYVQLKPRPGIEPDVVPSGVERALQVAISEQELQ 126
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ + L FL ++ S +G+ G V G+M F ++ + ++ PGI E+LI+ +GL
Sbjct: 127 LEKGLQFLATVGSVSPYIGLFGTVWGIMNSFIGLSQVQQATLSTVAPGIAEALIATAIGL 186
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEG 227
+IP+ IAYN F + + F NE L+R +G
Sbjct: 187 FAAIPAVIAYNCFAARGQTLTARYYSFGNELQVRLNRTLQG 227
>gi|66045528|ref|YP_235369.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. syringae
B728a]
gi|63256235|gb|AAY37331.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. syringae
B728a]
Length = 255
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 103/199 (51%), Gaps = 9/199 (4%)
Query: 25 KCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGL 84
+I LL IFS+ +W + + K V F L+ Q R+F + FW+ SL++ + H G
Sbjct: 26 HAVIWLLVIFSVATWGLALLKGVQFSRLKSQDRKFHKQFWAASSLDSAAQ--LAHEQPGA 83
Query: 85 AAIFMSAMSEWKKSCDKGARS-----PIGIQDRIDRMMDVAIARELEEITEKLSFLGSMS 139
AA A + D GA++ I QDR++R + I RE + L+ L S+
Sbjct: 84 AARVALAGYAAIQVAD-GAQAHDLSQSINHQDRLERALRQQIVRERRSLETGLAILASIG 142
Query: 140 SAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCVSIPSSIAYNK 198
S +G+ G V G+M + I+ S ++ ++ G I +L++ +G+ V++P+ + YN
Sbjct: 143 STSPFIGLFGTVWGIMSALKGISAAGSASLETVAGPIGAALVATGVGIAVAVPAVLVYNY 202
Query: 199 FIEDSKKFAMQMEGFANEF 217
F+ K A ++ FA++F
Sbjct: 203 FLRRLKLTAADLDDFAHDF 221
>gi|126642626|ref|YP_001085610.1| tolerance to group A colicins single-stranded DNA filamentous phage
[Acinetobacter baumannii ATCC 17978]
Length = 207
Score = 92.4 bits (228), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 105/201 (52%), Gaps = 3/201 (1%)
Query: 30 LLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLK-NHHNIGLAAIF 88
+L + SI SW +I + +++ R+ F+++FWSG L T+ + + N GL IF
Sbjct: 3 ILLLASIFSWYLIAKLHMSYKKARQDDEHFQKMFWSGAELNTLYNNAQLNSKRSGLEDIF 62
Query: 89 MSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGIL 148
+SE+ K + A + I+ +R++ V ++R+ + L L S+ S +G+
Sbjct: 63 YQGLSEFFKLKKRQAPTSQMIEG-TERILRVGLSRDQGSLEYGLGTLASIGSVAPYIGLF 121
Query: 149 GAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFA 207
G V G+M F +A + ++ PGI E+LI+ +GL +IP+ +A+N F S+
Sbjct: 122 GTVWGIMNAFIGLAAVDQVTLATVAPGIAEALIATAIGLFAAIPAVLAFNHFTAKSESVY 181
Query: 208 MQMEGFANEFSAILSRQTEGN 228
FA E A+L RQ+ G+
Sbjct: 182 SDRALFAEEMIALLQRQSVGS 202
>gi|269468526|gb|EEZ80180.1| biopolymer transport protein TolQ [uncultured SUP05 cluster
bacterium]
Length = 222
Score = 92.4 bits (228), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 104/217 (47%), Gaps = 3/217 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+SIF+L + G V+ ++ +L + SI SW++I+ K + +R + F F + LE
Sbjct: 5 LSIFSLIISAGFVVQVVMFILVLMSIYSWTIILSKKKILMDAKRDIKTFHNNFLTDTDLE 64
Query: 71 TVCKSLKN--HHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ K + + IF S E+ ++ I +R R M+ E++ +
Sbjct: 65 KLHKKIPKVVSKRSPMEHIFGSGYGEFTHFSSSSNQALIMNSERAYRAMNTTANNEVDRL 124
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLC 187
LS L ++S+ +G+ G V G+M F +A + + PGI E+LI+ GL
Sbjct: 125 DGGLSVLAMIASSSPYIGLFGTVWGIMHSFIGLASVKQATIAIVAPGIAEALIATAFGLF 184
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+IP+++AYN+ + + A + F E IL RQ
Sbjct: 185 AAIPATMAYNRLVSQVEGIANKYTAFIEELFVILQRQ 221
>gi|153800449|ref|ZP_01955035.1| tolQ protein [Vibrio cholerae MZO-3]
gi|124124075|gb|EAY42818.1| tolQ protein [Vibrio cholerae MZO-3]
Length = 194
Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 91/186 (48%), Gaps = 3/186 (1%)
Query: 42 IIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHN--IGLAAIFMSAMSEWKKSC 99
II++S R+ FE FWSG L + + +K + G+ IF + +E+ +
Sbjct: 3 IIKRSKVISAAEREADTFEDRFWSGMDLGALYQDVKKRKDDIYGIEEIFYAGFTEFARLR 62
Query: 100 DKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQ 159
+P + + R M VA+ARE++ + L FL ++ S +G+ G V G+M F
Sbjct: 63 KTNPGAPDFVMEGTGRAMRVAVAREVDSLETSLPFLATVGSISPYIGLFGTVWGIMHAFI 122
Query: 160 SIAGYYSNNVVSI-PGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFS 218
++ + + PGI E+LI+ +GL +IP+ +AYN+ K F+ EF
Sbjct: 123 ALGEVKQATLAMVAPGIAEALIATAIGLFAAIPAVMAYNRLSNKVSKLEHTYATFSEEFH 182
Query: 219 AILSRQ 224
IL RQ
Sbjct: 183 TILHRQ 188
>gi|262373119|ref|ZP_06066398.1| TolQ [Acinetobacter junii SH205]
gi|262313144|gb|EEY94229.1| TolQ [Acinetobacter junii SH205]
Length = 232
Score = 92.0 bits (227), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 109/220 (49%), Gaps = 3/220 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+ I L +Q V+ ++ +L + SI SW +I + + F + F+++FWSG L
Sbjct: 9 LHISDLILQASPVVQLVMLILLLASIYSWYLIAKLHMGFKKAEQDDEHFQKMFWSGAELN 68
Query: 71 TVCKSLK-NHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
T+ + + N GL IF + E+ K + A + I+ +R++ V ++R+ +
Sbjct: 69 TLYNNAQLNSKRRGLEDIFYQGLGEFFKLQKRKADTTQTIEG-TERILRVGLSRDQGGLE 127
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCV 188
L L S+ S +G+ G V G+M F +A + ++ PGI E+LI+ +GL
Sbjct: 128 VGLGSLASIGSVAPYIGLFGTVWGIMNAFIGLAAVDQVTLATVAPGIAEALIATAIGLFA 187
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
+IP+ +A+N F + FA E A+L RQ+ G
Sbjct: 188 AIPAVLAFNHFTAKGESIYSDRALFAEEMIALLQRQSIGT 227
>gi|331010851|gb|EGH90907.1| tolQ protein [Pseudomonas syringae pv. tabaci ATCC 11528]
Length = 236
Score = 91.7 bits (226), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 109/221 (49%), Gaps = 3/221 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
++I+ L L VK ++ +L + S++SW +IIQ+S+ R F+Q F + L
Sbjct: 7 HMTIWGLISDASLLVKAVMLILLLASLVSWYLIIQRSLALGHYERTLDAFQQRFRAEAEL 66
Query: 70 ETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
T+ + G+ +F + +E+ + + P + ++R + VAI+ + +
Sbjct: 67 ATLYAESHSAQEGADGIERVFNAGYAEYVQLKPRPGIEPDVVPSGVERALQVAISEQELQ 126
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ + L FL ++ S +G+ G V G+M F ++ + ++ PGI E+LI+ +GL
Sbjct: 127 LEKGLQFLATVGSVSPYIGLFGTVWGIMNSFIGLSQVQQATLSTVAPGIAEALIATAIGL 186
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEG 227
++P+ IAYN F + + F NE L+R +G
Sbjct: 187 FAALPAVIAYNCFAARGQTLTARYYSFGNELQVRLNRTLQG 227
>gi|254372332|ref|ZP_04987823.1| hypothetical protein FTCG_01399 [Francisella tularensis subsp.
novicida GA99-3549]
gi|151570061|gb|EDN35715.1| hypothetical protein FTCG_01399 [Francisella novicida GA99-3549]
Length = 235
Score = 91.7 bits (226), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 112/221 (50%), Gaps = 3/221 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
IS+ L + V+ I+ L S+ SW+++++ + R + +F++LFW+G ++
Sbjct: 5 ISLVELVLHANFIVQLIMLALVAMSVYSWAIMLEVNKRVKKYRNEQVQFDKLFWAGHHIQ 64
Query: 71 TVCKS-LKNHHNI-GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ L++ NI G + IF S + E+ D I + ++R + +AIA+E +E+
Sbjct: 65 KLYDYYLQHKENIFGKSIIFCSGLREFNNLKDTCMLRGDTILEGMERTVSIAIAQEAKEL 124
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
KL L ++ + +G++G V G+M F ++ G + V P I E+LI+ LGL
Sbjct: 125 DRKLPALATIGAVAPYIGLVGTVWGIMSSFNTLGGVEQATISVVAPHIAEALIATALGLF 184
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
V+IP+ I ++K E F ++ +L ++ +
Sbjct: 185 VAIPAVIGHSKLSNQVDDILSSYESFQDDLCILLLKEAHRD 225
>gi|222054201|ref|YP_002536563.1| protein TolQ [Geobacter sp. FRC-32]
gi|221563490|gb|ACM19462.1| protein TolQ [Geobacter sp. FRC-32]
Length = 224
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 95/204 (46%), Gaps = 9/204 (4%)
Query: 34 FSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMS 93
FS++SW++I K + + F + FW + + + L N L +F
Sbjct: 21 FSVVSWAIIFYKLLQVHRANNESERFLEFFWKAKRFDAINAQLDRFANSPLTVLFNEGYG 80
Query: 94 EWKKSCDKG--ARSPIGIQ------DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLV 145
E KK +KG + P I D I R + A E+ + + L+FL + S +
Sbjct: 81 ELKKLMEKGEEKQDPNVISTDLAGIDNITRALRRATTSEITRLEKYLTFLATTGSTAPFI 140
Query: 146 GILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSK 204
G+ G V G+M F+ I S ++ V PGI E+LI+ +GL +IP+ + YN F + +
Sbjct: 141 GLFGTVWGIMTAFKGIGETGSASLAVVAPGIAEALIATAIGLVAAIPAVMGYNHFQQKIR 200
Query: 205 KFAMQMEGFANEFSAILSRQTEGN 228
+M+ F+ EF I+ R G
Sbjct: 201 VLIGEMDSFSTEFLNIVQRTFTGK 224
>gi|258591273|emb|CBE67570.1| TolQ protein [NC10 bacterium 'Dutch sediment']
Length = 239
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 112/233 (48%), Gaps = 20/233 (8%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+++ +L +Q G+ + ++ +L FS++SW++I K F RR+ +F +F S ++L
Sbjct: 1 MNVVSLVVQAGVVAQAVLLILLGFSLMSWTLIFMKFGVFRRGRRESAQFLHIFRSAKNLT 60
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKG----ARSPIGIQDR-------------- 112
TV + K + ++F E + G A+ P + R
Sbjct: 61 TVFEESKRFTKSPVVSVFQEGYRELSQLVKGGQGPAAQWPTANEPRSAVPEAPLHKEPLD 120
Query: 113 -IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVS 171
I R + A +E+ + L FL + + VG+ G V G+M F SI S N+ +
Sbjct: 121 LISRTLRHASMKEVAQQERYLIFLATTGNVTPFVGLFGTVWGIMNAFASIGQAGSANLGA 180
Query: 172 I-PGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
+ PG+ E+LI+ GL +IP+ +AYN F+ ++ A +ME F EF + R
Sbjct: 181 VAPGVAEALITTAAGLGAAIPAVVAYNYFLNRVRRQATEMELFGLEFLTLAER 233
>gi|330958698|gb|EGH58958.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. maculicola
str. ES4326]
Length = 240
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 102/198 (51%), Gaps = 9/198 (4%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLA 85
+I LL IFS+ +W + + K V F L+ Q R+F + FW+ SL++ + H G A
Sbjct: 14 AVIWLLVIFSVATWGLALLKGVQFSRLKAQDRKFHKQFWAASSLDSAAQ--LAHEQPGAA 71
Query: 86 AIFMSAMSEWKKSCDKGAR-----SPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSS 140
A A + D GA+ I QDR++R + I RE + L+ L S+ S
Sbjct: 72 ARVALAGYVAIQVSD-GAQVNDLSQSINHQDRLERALRQQIVRERRSLETGLAILASIGS 130
Query: 141 AGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCVSIPSSIAYNKF 199
+G+ G V G+M + I+ S ++ ++ G I +L++ +G+ V++P+ + YN F
Sbjct: 131 TSPFIGLFGTVWGIMSALKGISAAGSASLETVAGPIGAALVATGVGIAVAVPAVLVYNYF 190
Query: 200 IEDSKKFAMQMEGFANEF 217
+ K A ++ FA++F
Sbjct: 191 LRRLKLTAADLDDFAHDF 208
>gi|89255757|ref|YP_513119.1| TolQ protein [Francisella tularensis subsp. holarctica LVS]
gi|115314251|ref|YP_762974.1| TolQ protein [Francisella tularensis subsp. holarctica OSU18]
gi|118496962|ref|YP_898012.1| TolQ protein [Francisella tularensis subsp. novicida U112]
gi|156501720|ref|YP_001427785.1| TolQ protein [Francisella tularensis subsp. holarctica FTNF002-00]
gi|167009209|ref|ZP_02274140.1| TolQ protein [Francisella tularensis subsp. holarctica FSC200]
gi|194324191|ref|ZP_03057965.1| TolQ protein [Francisella tularensis subsp. novicida FTE]
gi|208780414|ref|ZP_03247755.1| TolQ protein [Francisella novicida FTG]
gi|224457027|ref|ZP_03665500.1| TolQ protein [Francisella tularensis subsp. tularensis MA00-2987]
gi|254369032|ref|ZP_04985045.1| hypothetical protein FTAG_00872 [Francisella tularensis subsp.
holarctica FSC022]
gi|254370435|ref|ZP_04986440.1| group A colicin translocation [Francisella tularensis subsp.
tularensis FSC033]
gi|254373806|ref|ZP_04989289.1| group A colicin translocation [Francisella novicida GA99-3548]
gi|89143588|emb|CAJ78771.1| TolQ protein [Francisella tularensis subsp. holarctica LVS]
gi|115129150|gb|ABI82337.1| TolQ protein [Francisella tularensis subsp. holarctica OSU18]
gi|118422868|gb|ABK89258.1| group A colicin translocation; tolQ protein [Francisella novicida
U112]
gi|151568678|gb|EDN34332.1| group A colicin translocation [Francisella tularensis subsp.
tularensis FSC033]
gi|151571527|gb|EDN37181.1| group A colicin translocation [Francisella novicida GA99-3548]
gi|156252323|gb|ABU60829.1| tol-pal system component, tolQ [Francisella tularensis subsp.
holarctica FTNF002-00]
gi|157121953|gb|EDO66123.1| hypothetical protein FTAG_00872 [Francisella tularensis subsp.
holarctica FSC022]
gi|194321638|gb|EDX19122.1| TolQ protein [Francisella tularensis subsp. novicida FTE]
gi|208743782|gb|EDZ90085.1| TolQ protein [Francisella novicida FTG]
gi|282159131|gb|ADA78522.1| TolQ protein [Francisella tularensis subsp. tularensis NE061598]
gi|328676436|gb|AEB27306.1| MotA/TolQ/ExbB proton channel family protein [Francisella cf.
novicida Fx1]
Length = 235
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 112/221 (50%), Gaps = 3/221 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
IS+ L + V+ I+ L S+ SW+++++ + R + +F++LFW+G ++
Sbjct: 5 ISLVELVLHANFIVQLIMLALVAMSVYSWAIMLEVNNRVKKYRNEQVQFDKLFWAGHHIQ 64
Query: 71 TVCKS-LKNHHNI-GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ L++ NI G + IF S + E+ D I + ++R + +AIA+E +E+
Sbjct: 65 KLYDYYLQHKENIFGKSIIFCSGLREFNNLKDTCMLRGDTILEGMERTVSIAIAQEAKEL 124
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
KL L ++ + +G++G V G+M F ++ G + V P I E+LI+ LGL
Sbjct: 125 DRKLPALATIGAVAPYIGLVGTVWGIMSSFNTLGGVEQATISVVAPHIAEALIATALGLF 184
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
V+IP+ I ++K E F ++ +L ++ +
Sbjct: 185 VAIPAVIGHSKLSNQVDDILSSYESFQDDLCILLLKEAHRD 225
>gi|56707946|ref|YP_169842.1| TolQ protein [Francisella tularensis subsp. tularensis SCHU S4]
gi|110670417|ref|YP_666974.1| TolQ protein [Francisella tularensis subsp. tularensis FSC198]
gi|134302261|ref|YP_001122230.1| TolQ protein [Francisella tularensis subsp. tularensis WY96-3418]
gi|254874750|ref|ZP_05247460.1| tolQ protein [Francisella tularensis subsp. tularensis MA00-2987]
gi|56604438|emb|CAG45470.1| TolQ protein [Francisella tularensis subsp. tularensis SCHU S4]
gi|110320750|emb|CAL08853.1| TolQ protein [Francisella tularensis subsp. tularensis FSC198]
gi|134050038|gb|ABO47109.1| protein TolQ [Francisella tularensis subsp. tularensis WY96-3418]
gi|254840749|gb|EET19185.1| tolQ protein [Francisella tularensis subsp. tularensis MA00-2987]
Length = 239
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 112/221 (50%), Gaps = 3/221 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
IS+ L + V+ I+ L S+ SW+++++ + R + +F++LFW+G ++
Sbjct: 9 ISLVELVLHANFIVQLIMLALVAMSVYSWAIMLEVNNRVKKYRNEQVQFDKLFWAGHHIQ 68
Query: 71 TVCKS-LKNHHNI-GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ L++ NI G + IF S + E+ D I + ++R + +AIA+E +E+
Sbjct: 69 KLYDYYLQHKENIFGKSIIFCSGLREFNNLKDTCMLRGDTILEGMERTVSIAIAQEAKEL 128
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
KL L ++ + +G++G V G+M F ++ G + V P I E+LI+ LGL
Sbjct: 129 DRKLPALATIGAVAPYIGLVGTVWGIMSSFNTLGGVEQATISVVAPHIAEALIATALGLF 188
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
V+IP+ I ++K E F ++ +L ++ +
Sbjct: 189 VAIPAVIGHSKLSNQVDDILSSYESFQDDLCILLLKEAHRD 229
>gi|330966843|gb|EGH67103.1| TonB system transport protein ExbB [Pseudomonas syringae pv.
actinidiae str. M302091]
Length = 242
Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 101/197 (51%), Gaps = 7/197 (3%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHH----N 81
+I LL IFS+ +W + + K V F L+ Q R+F + FW+ SL++ + +
Sbjct: 14 AVIWLLVIFSVATWGLALLKGVQFSRLKAQDRKFHKQFWAASSLDSAAQLAQQQPGAAAR 73
Query: 82 IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSA 141
+ LA + + ++ D I QDR++R + I RE + L+ L S+ S
Sbjct: 74 VALAGYAAIQVPDGAQANDLS--QSINHQDRLERALRQQIVRERRSLETGLAILASIGST 131
Query: 142 GLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCVSIPSSIAYNKFI 200
+G+ G V G+M + I+ S ++ ++ G I +L++ +G+ V++P+ + YN F+
Sbjct: 132 SPFIGLFGTVWGIMSALKGISAAGSASLETVAGPIGAALVATGVGIAVAVPAVLVYNYFL 191
Query: 201 EDSKKFAMQMEGFANEF 217
K A ++ FA++F
Sbjct: 192 RRLKLTAADLDDFAHDF 208
>gi|187931252|ref|YP_001891236.1| group A colicin translocation; tolQ protein [Francisella tularensis
subsp. mediasiatica FSC147]
gi|187712161|gb|ACD30458.1| group A colicin translocation; tolQ protein [Francisella tularensis
subsp. mediasiatica FSC147]
Length = 235
Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 112/221 (50%), Gaps = 3/221 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
IS+ L + V+ I+ L S+ SW+++++ + R + +F++LFW+G ++
Sbjct: 5 ISLVELVLHANFIVQLIMLALVAMSVYSWAIMLEVNNRVKKYRNEQVQFDKLFWAGHHIQ 64
Query: 71 TVCKS-LKNHHNI-GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ L++ NI G + IF S + E+ D I + ++R + +AIA+E +E+
Sbjct: 65 KLHDYYLQHKENIFGKSIIFCSGLREFNNLKDTCMLRGDTILEGMERTVSIAIAQEAKEL 124
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
KL L ++ + +G++G V G+M F ++ G + V P I E+LI+ LGL
Sbjct: 125 DRKLPALATIGAVAPYIGLVGTVWGIMSSFNTLGGVEQATISVVAPHIAEALIATALGLF 184
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
V+IP+ I ++K E F ++ +L ++ +
Sbjct: 185 VAIPAVIGHSKLSNQVDDILSSYESFQDDLCILLLKEAHRD 225
>gi|104784186|ref|YP_610684.1| biopolymer transport protein ExbB [Pseudomonas entomophila L48]
gi|95113173|emb|CAK17901.1| putative biopolymer transport protein ExbB [Pseudomonas entomophila
L48]
Length = 240
Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 103/200 (51%), Gaps = 13/200 (6%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHH----- 80
+I LL FS+ +W++ + K V F+ L+ Q + F Q FW+ SL++ + +
Sbjct: 14 AVIWLLVGFSVATWALALAKVVQFVRLKNQDKRFHQQFWAASSLDSAAEPAHDLPGPAAR 73
Query: 81 --NIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSM 138
G AAI A+ E ++ D I QDR++R + I RE + L+ + S+
Sbjct: 74 VAQAGFAAI---AVGEPGQASDLS--QAINHQDRLERALRQQIVRERRSLETGLAVVASI 128
Query: 139 SSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCVSIPSSIAYN 197
S +G+ G V G+M + I+ S ++ ++ G I +L++ +G+ V++P+ + YN
Sbjct: 129 GSTSPFIGLFGTVWGIMEALKGISAAGSASLETVAGPIGAALVATGVGIAVAVPAVLVYN 188
Query: 198 KFIEDSKKFAMQMEGFANEF 217
F+ K A ++ FA++F
Sbjct: 189 YFLRRLKLTAADLDDFAHDF 208
>gi|167626690|ref|YP_001677190.1| group A colicin translocation protein TolQ [Francisella
philomiragia subsp. philomiragia ATCC 25017]
gi|241667265|ref|ZP_04754843.1| group A colicin translocation; TolQ protein [Francisella
philomiragia subsp. philomiragia ATCC 25015]
gi|167596691|gb|ABZ86689.1| group A colicin translocation; TolQ protein [Francisella
philomiragia subsp. philomiragia ATCC 25017]
Length = 235
Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 111/219 (50%), Gaps = 3/219 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
IS+ L + V+ I+ L S+ SW+++ + + R + +F++LFW+G ++
Sbjct: 5 ISLIQLILHANFIVQLIMLGLVAMSVYSWAIMFEVNNRVKKYRNEQVQFDKLFWAGHHIQ 64
Query: 71 TVCKS-LKNHHNI-GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ L++ NI G + IF S + E+ D G I + ++R + +AIA+E +E+
Sbjct: 65 KLYDYYLQHKENIFGKSIIFCSGLREFNNLKDTGILRGDTILEGMERTVSIAIAQEAKEL 124
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
KL L ++ + +G++G V G+M F ++ G + V P I E+LI+ LGL
Sbjct: 125 DRKLPALATIGAVSPYIGLVGTVWGIMSSFNTLGGVEQATISVVAPHIAEALIATALGLF 184
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
V+IP+ I +++ E F ++ +L ++
Sbjct: 185 VAIPAVIGHSRLSNQVDDVLSGYESFQDDLCILLLKEAH 223
>gi|71735398|ref|YP_275070.1| TonB system transport protein ExbB2 [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|257482634|ref|ZP_05636675.1| TonB system transport protein ExbB2 [Pseudomonas syringae pv.
tabaci ATCC 11528]
gi|289623868|ref|ZP_06456822.1| TonB system transport protein ExbB2 [Pseudomonas syringae pv.
aesculi str. NCPPB3681]
gi|289650028|ref|ZP_06481371.1| TonB system transport protein ExbB2 [Pseudomonas syringae pv.
aesculi str. 2250]
gi|71555951|gb|AAZ35162.1| TonB system transport protein ExbB2 [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|320323563|gb|EFW79647.1| TonB system transport protein ExbB2 [Pseudomonas syringae pv.
glycinea str. B076]
gi|320328195|gb|EFW84199.1| TonB system transport protein ExbB2 [Pseudomonas syringae pv.
glycinea str. race 4]
gi|330868827|gb|EGH03536.1| TonB system transport protein ExbB2 [Pseudomonas syringae pv.
aesculi str. 0893_23]
gi|330880152|gb|EGH14301.1| TonB system transport protein ExbB2 [Pseudomonas syringae pv.
glycinea str. race 4]
gi|330890875|gb|EGH23536.1| TonB system transport protein ExbB2 [Pseudomonas syringae pv. mori
str. 301020]
gi|330986048|gb|EGH84151.1| TonB system transport protein ExbB2 [Pseudomonas syringae pv.
lachrymans str. M301315]
gi|331010353|gb|EGH90409.1| TonB system transport protein ExbB2 [Pseudomonas syringae pv.
tabaci ATCC 11528]
Length = 242
Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 101/197 (51%), Gaps = 7/197 (3%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHH----N 81
+I LL IFS+ +W + + K V F L+ Q R+F + FW+ SL++ + +
Sbjct: 14 AVIWLLVIFSVATWGLALLKGVQFSRLKSQDRKFHKQFWAASSLDSAAQLAQEQPGAAAR 73
Query: 82 IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSA 141
+ LA + + ++ D I QDR++R + I RE + L+ L S+ S
Sbjct: 74 VALAGYAAIQVPDGAQAND--LSQSINHQDRLERALRQQIVRERRSLETGLAILASIGST 131
Query: 142 GLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCVSIPSSIAYNKFI 200
+G+ G V G+M + I+ S ++ ++ G I +L++ +G+ V++P+ + YN F+
Sbjct: 132 SPFIGLFGTVWGIMSALKGISAAGSASLETVAGPIGAALVATGVGIAVAVPAVLVYNYFL 191
Query: 201 EDSKKFAMQMEGFANEF 217
K A ++ FA++F
Sbjct: 192 RRLKLTAADLDDFAHDF 208
>gi|28869675|ref|NP_792294.1| TonB system transport protein ExbB [Pseudomonas syringae pv. tomato
str. DC3000]
gi|301386225|ref|ZP_07234643.1| TonB system transport protein ExbB [Pseudomonas syringae pv. tomato
Max13]
gi|302060048|ref|ZP_07251589.1| TonB system transport protein ExbB [Pseudomonas syringae pv. tomato
K40]
gi|302134430|ref|ZP_07260420.1| TonB system transport protein ExbB [Pseudomonas syringae pv. tomato
NCPPB 1108]
gi|28852917|gb|AAO55989.1| TonB system transport protein ExbB [Pseudomonas syringae pv. tomato
str. DC3000]
Length = 242
Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 101/197 (51%), Gaps = 7/197 (3%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHH----N 81
+I LL IFS+ +W + + K V F L+ Q R+F + FW+ SL++ + +
Sbjct: 14 AVIWLLVIFSVATWGLALLKGVQFSRLKAQDRKFHKQFWAASSLDSAAQLAQEQPGAAAR 73
Query: 82 IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSA 141
+ LA + + ++ D I QDR++R + I RE + L+ L S+ S
Sbjct: 74 VALAGYAAIQVPDGAQANDLS--QSINHQDRLERALRQQIVRERRSLETGLAILASIGST 131
Query: 142 GLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCVSIPSSIAYNKFI 200
+G+ G V G+M + I+ S ++ ++ G I +L++ +G+ V++P+ + YN F+
Sbjct: 132 SPFIGLFGTVWGIMSALKGISAAGSASLETVAGPIGAALVATGVGIAVAVPAVLVYNYFL 191
Query: 201 EDSKKFAMQMEGFANEF 217
K A ++ FA++F
Sbjct: 192 RRLKLTAADLDDFAHDF 208
>gi|330876907|gb|EGH11056.1| TonB system transport protein ExbB [Pseudomonas syringae pv.
morsprunorum str. M302280PT]
Length = 242
Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 101/197 (51%), Gaps = 7/197 (3%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHH----N 81
+I LL IFS+ +W + + K V F L+ Q R+F + FW+ SL++ + +
Sbjct: 14 AVIWLLVIFSVATWGLALLKGVQFSRLKAQDRKFHKQFWAASSLDSAAQLAQEQPGAAAR 73
Query: 82 IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSA 141
+ LA + + ++ D I QDR++R + I RE + L+ L S+ S
Sbjct: 74 VALAGYAAIQVPDGAQANDLS--QSINHQDRLERALRQQIVRERRSLETGLAILASIGST 131
Query: 142 GLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCVSIPSSIAYNKFI 200
+G+ G V G+M + I+ S ++ ++ G I +L++ +G+ V++P+ + YN F+
Sbjct: 132 SPFIGLFGTVWGIMSALKGISAAGSASLETVAGPIGAALVATGVGIAVAVPAVLVYNYFL 191
Query: 201 EDSKKFAMQMEGFANEF 217
K A ++ FA++F
Sbjct: 192 RRLKLTAADLDDFAHDF 208
>gi|254875816|ref|ZP_05248526.1| TolQ protein [Francisella philomiragia subsp. philomiragia ATCC
25015]
gi|254841837|gb|EET20251.1| TolQ protein [Francisella philomiragia subsp. philomiragia ATCC
25015]
Length = 240
Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 111/219 (50%), Gaps = 3/219 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
IS+ L + V+ I+ L S+ SW+++ + + R + +F++LFW+G ++
Sbjct: 10 ISLIQLILHANFIVQLIMLGLVAMSVYSWAIMFEVNNRVKKYRNEQVQFDKLFWAGHHIQ 69
Query: 71 TVCKS-LKNHHNI-GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ L++ NI G + IF S + E+ D G I + ++R + +AIA+E +E+
Sbjct: 70 KLYDYYLQHKENIFGKSIIFCSGLREFNNLKDTGILRGDTILEGMERTVSIAIAQEAKEL 129
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
KL L ++ + +G++G V G+M F ++ G + V P I E+LI+ LGL
Sbjct: 130 DRKLPALATIGAVSPYIGLVGTVWGIMSSFNTLGGVEQATISVVAPHIAEALIATALGLF 189
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
V+IP+ I +++ E F ++ +L ++
Sbjct: 190 VAIPAVIGHSRLSNQVDDVLSGYESFQDDLCILLLKEAH 228
>gi|87198415|ref|YP_495672.1| MotA/TolQ/ExbB proton channel [Novosphingobium aromaticivorans DSM
12444]
gi|87134096|gb|ABD24838.1| Cell division and transport-associated protein TolQ
[Novosphingobium aromaticivorans DSM 12444]
Length = 227
Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 121/231 (52%), Gaps = 19/231 (8%)
Query: 7 AIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLF--- 63
A+ D S ALF Q + VK I+ L SI +W++I+ + I R+ LF
Sbjct: 5 AVTDFSPIALFAQADIVVKVIMLGLLAASIWTWAIIVAQ----ILKNRRAHATSDLFEAE 60
Query: 64 -----WSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCD-KGARSPIGIQDRIDRMM 117
++G+S + + + AA+F +AM+EW KS + + ++RI ++
Sbjct: 61 IREAGFTGESSKHLARDASP-----AAALFKAAMAEWSKSVRARASLDKDAARERIADVL 115
Query: 118 DVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGII 176
+ AI E++ ++E+L++L ++ S VG+ G V G+M F SIA + ++ V PGI
Sbjct: 116 EGAIEGEVDRLSERLNYLATIGSIAPFVGLFGTVWGIMRSFTSIAASQNTSLSVVAPGIA 175
Query: 177 ESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEG 227
E+L++ +GL +IP+ IAYN+F +F ++ FA LSR+ +
Sbjct: 176 EALLATAIGLFAAIPAVIAYNRFGHSLNRFEARLVRFARYLRGNLSRELDA 226
>gi|269103010|ref|ZP_06155707.1| MotA/TolQ/ExbB proton channel family protein [Photobacterium
damselae subsp. damselae CIP 102761]
gi|268162908|gb|EEZ41404.1| MotA/TolQ/ExbB proton channel family protein [Photobacterium
damselae subsp. damselae CIP 102761]
Length = 194
Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 90/187 (48%), Gaps = 3/187 (1%)
Query: 41 VIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHN--IGLAAIFMSAMSEWKKS 98
+II++S + FE FWSG L + K ++ + G IF + E+ +
Sbjct: 1 MIIKRSQVLSEATTRAHRFEDRFWSGVDLSQLYKEVEARKDDLTGSEQIFYAGFKEYARL 60
Query: 99 CDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFF 158
+ P + + R M VA++RE+EE+ L FL ++ S +G+ G V G+M F
Sbjct: 61 HRSNGKVPEAVMEGTGRAMRVALSREVEELETNLPFLATVGSISPYIGLFGTVWGIMHAF 120
Query: 159 QSIAGYYSNNVVSI-PGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEF 217
++ + + PGI E+L++ +GL +IP+ + YN+ K F EF
Sbjct: 121 IALGAVKQATLAMVAPGIAEALVATAMGLFAAIPAVMFYNRLTNRVAKLEHTYATFMEEF 180
Query: 218 SAILSRQ 224
S+IL RQ
Sbjct: 181 SSILHRQ 187
>gi|298487360|ref|ZP_07005408.1| MotA/TolQ/ExbB proton channel family protein [Pseudomonas
savastanoi pv. savastanoi NCPPB 3335]
gi|298158163|gb|EFH99235.1| MotA/TolQ/ExbB proton channel family protein [Pseudomonas
savastanoi pv. savastanoi NCPPB 3335]
Length = 255
Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 104/203 (51%), Gaps = 7/203 (3%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHH----N 81
+I LL IFS+ +W + + K V F L+ Q R+F + FW+ SL++ + +
Sbjct: 27 AVIWLLVIFSVATWGLALLKGVQFSRLKSQDRKFHKQFWAASSLDSAAQLAQEQPGAAAR 86
Query: 82 IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSA 141
+ LA + + ++ D I QDR++R + I RE + L+ L S+ S
Sbjct: 87 VALAGYAAIQVPDGAQAND--LSQSINHQDRLERALRQQIVRERRSLETGLAILASIGST 144
Query: 142 GLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCVSIPSSIAYNKFI 200
+G+ G V G+M + I+ S ++ ++ G I +L++ +G+ V++P+ + YN F+
Sbjct: 145 SPFIGLFGTVWGIMSALKGISAAGSASLETVAGPIGAALVATGVGIAVAVPAVLVYNYFL 204
Query: 201 EDSKKFAMQMEGFANEFSAILSR 223
K A ++ FA++F ++ +
Sbjct: 205 RRLKLTAADLDDFAHDFYSLAQK 227
>gi|71065807|ref|YP_264534.1| TolQ proton channel [Psychrobacter arcticus 273-4]
gi|71038792|gb|AAZ19100.1| probable TolQ proton channel [Psychrobacter arcticus 273-4]
Length = 243
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 112/218 (51%), Gaps = 5/218 (2%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
++I L Q L V+ ++ LL + S+LSW +I + S T R ++FE FWSG+ L
Sbjct: 5 LNIIDLITQASLLVQIVMALLLLASLLSWVIIFRMSARLGTARNFDQQFETWFWSGEDLA 64
Query: 71 TVCKSLK-NHHNIGLAAIFMSAMSEWKKSCDKGARSPI-GIQDRIDRMMDVAIARELEEI 128
+ + ++ + GL IF SE+ + K R P I D ++R + V + R+ +
Sbjct: 65 KLYQGIQGSPERQGLEQIFYVGFSEYLRMHKK--RQPKDDIIDGVERKLRVGLGRQQLLL 122
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLC 187
L+ L S+ S VG+ G V G+M F ++ + ++ PGI E+LI+ +GL
Sbjct: 123 ESGLTTLASIGSVAPYVGLFGTVWGIMNAFLGLSQNEQATLAAVAPGIAEALIATAMGLF 182
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ +AYN F S + F +E + +L R+T
Sbjct: 183 AAIPAVLAYNHFTAKSSRLYDSRALFCDEMTGMLQRET 220
>gi|328675511|gb|AEB28186.1| MotA/TolQ/ExbB proton channel family protein [Francisella cf.
novicida 3523]
Length = 235
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 111/221 (50%), Gaps = 3/221 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
IS+ L + V+ I+ L S+ SW+++ + + R + +F++LFW+G ++
Sbjct: 5 ISLVELVLHANFIVQLIMLALVAMSVYSWAIMFEVNNRVKKYRNEQVQFDKLFWAGHHIQ 64
Query: 71 TVCKS-LKNHHNI-GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ L++ NI G + IF S + E+ D I + ++R + +AIA+E +E+
Sbjct: 65 KLYDYYLQHKENIFGKSIIFCSGLREFNNLKDTCMLRGDTILEGMERTVSIAIAQEAKEL 124
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
KL L ++ + +G++G V G+M F ++ G + V P I E+LI+ LGL
Sbjct: 125 DRKLPALATIGAVAPYIGLVGTVWGIMSSFNTLGGVEQATISVVAPHIAEALIATALGLF 184
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
V+IP+ I ++K E F ++ +L ++ +
Sbjct: 185 VAIPAVIGHSKLSNQVDDILSSYESFQDDLCILLLKEAHRD 225
>gi|213970953|ref|ZP_03399075.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. tomato T1]
gi|213924329|gb|EEB57902.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. tomato T1]
Length = 255
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 101/197 (51%), Gaps = 7/197 (3%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHH----N 81
+I LL IFS+ +W + + K V F L+ Q R+F + FW+ SL++ + +
Sbjct: 27 AVIWLLVIFSVATWGLALLKGVQFSRLKAQDRKFHKQFWAASSLDSAAQLAQEQPGAAAR 86
Query: 82 IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSA 141
+ LA + + ++ D I QDR++R + I RE + L+ L S+ S
Sbjct: 87 VALAGYAAIQVPDGAQANDLS--QSINHQDRLERALRQQIVRERRSLETGLAILASIGST 144
Query: 142 GLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCVSIPSSIAYNKFI 200
+G+ G V G+M + I+ S ++ ++ G I +L++ +G+ V++P+ + YN F+
Sbjct: 145 SPFIGLFGTVWGIMSALKGISAAGSASLETVAGPIGAALVATGVGIAVAVPAVLVYNYFL 204
Query: 201 EDSKKFAMQMEGFANEF 217
K A ++ FA++F
Sbjct: 205 RRLKLTAADLDDFAHDF 221
>gi|302188942|ref|ZP_07265615.1| TonB system transport protein ExbB2 [Pseudomonas syringae pv.
syringae 642]
Length = 242
Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 101/197 (51%), Gaps = 7/197 (3%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHH----N 81
+I LL +FSI +W + + K V F L+ Q R+F + FW+ SL++ + +
Sbjct: 14 AVIWLLVLFSIATWGLALLKGVQFSRLKSQDRKFHKQFWAASSLDSAAQLAQEQPGAAAR 73
Query: 82 IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSA 141
+ LA + + ++ D I QDR++R + I RE + L+ L S+ S
Sbjct: 74 VALAGYAAIQVPDGAQANDLS--QSINHQDRLERALRQQIVRERRSLETGLAILASIGST 131
Query: 142 GLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCVSIPSSIAYNKFI 200
+G+ G V G+M + I+ S ++ ++ G I +L++ +G+ V++P+ + YN F+
Sbjct: 132 SPFIGLFGTVWGIMSALKGISAAGSASLETVAGPIGAALVATGVGIAVAVPAVLVYNYFL 191
Query: 201 EDSKKFAMQMEGFANEF 217
K A ++ FA++F
Sbjct: 192 RRLKLTAADLDDFAHDF 208
>gi|93005964|ref|YP_580401.1| MotA/TolQ/ExbB proton channel [Psychrobacter cryohalolentis K5]
gi|92393642|gb|ABE74917.1| MotA/TolQ/ExbB proton channel [Psychrobacter cryohalolentis K5]
Length = 246
Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 112/218 (51%), Gaps = 5/218 (2%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
++I L Q L V+ ++ LL + S+LSW +I + S T R ++FE FWSG+ L
Sbjct: 5 LNIIDLITQASLLVQIVMALLLLASLLSWVIIFRMSARLGTARNFDQQFEAWFWSGEDLA 64
Query: 71 TVCKSLK-NHHNIGLAAIFMSAMSEWKKSCDKGARSPI-GIQDRIDRMMDVAIARELEEI 128
+ + ++ + GL IF SE+ + K R P I D ++R + V + R+ +
Sbjct: 65 KLYQGIQGSPERQGLEQIFYVGFSEYLRMHKK--RQPKDDIIDGVERKLRVGLGRQQLLL 122
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLC 187
L+ L S+ S VG+ G V G+M F ++ + ++ PGI E+LI+ +GL
Sbjct: 123 ESGLTTLASIGSVAPYVGLFGTVWGIMNAFLGLSQNEQATLAAVAPGIAEALIATAMGLF 182
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ +AYN F S + F +E + +L R+T
Sbjct: 183 AAIPAVLAYNHFTAKSSRLYDSRALFCDEMTGMLQRET 220
>gi|330937170|gb|EGH41211.1| biopolymer transport protein ExbB [Pseudomonas syringae pv. pisi
str. 1704B]
Length = 235
Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 108/208 (51%), Gaps = 12/208 (5%)
Query: 24 VKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCK-------SL 76
V ++ L +FS+LSW++++ KS ++ + Q ++F ++FWS L T + +L
Sbjct: 10 VPAVLWALILFSVLSWALLLIKSAQYVRQKSQNKQFTKVFWSAPDLLTAAEHSAQYPGAL 69
Query: 77 KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLG 136
N G A+ A+ E ++ + A + I DR++R + I +E + + L
Sbjct: 70 ARIANSGFEAM---AVDESPRTTQQLAHT-INRSDRLERNLRQQIQKERRALESGQAILA 125
Query: 137 SMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCVSIPSSIA 195
S+ S +G+ G V G+M QSI S ++ ++ G I +L++ +G+ V++P+ +
Sbjct: 126 SIGSTAPFIGLFGTVWGIMEALQSIGVTGSASLEAVAGPIGHALVATGVGIAVAVPAVLI 185
Query: 196 YNKFIEDSKKFAMQMEGFANEFSAILSR 223
YN F+ K M+ FA++F A+ R
Sbjct: 186 YNFFLRRLKLAVADMDDFAHDFDALAQR 213
>gi|330900513|gb|EGH31932.1| TonB system transport protein ExbB2 [Pseudomonas syringae pv.
japonica str. M301072PT]
gi|330979867|gb|EGH78183.1| TonB system transport protein ExbB2 [Pseudomonas syringae pv.
aptata str. DSM 50252]
Length = 242
Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 101/198 (51%), Gaps = 7/198 (3%)
Query: 25 KCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHH---- 80
+I LL +FS+ +W + + K V F L+ Q R+F + FW+ SL++ + +
Sbjct: 13 HAVIWLLVLFSVATWGLALLKGVQFSRLKSQDRKFHKRFWAASSLDSAAQLAQEQPGAAA 72
Query: 81 NIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSS 140
+ LA + + ++ D I QDR++R + I RE + L+ L S+ S
Sbjct: 73 RVALAGYAAIQVPDGAQANDLS--QSINHQDRLERALRQQIVRERRSLETGLAILASIGS 130
Query: 141 AGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCVSIPSSIAYNKF 199
+G+ G V G+M + I+ S ++ ++ G I +L++ +G+ V++P+ + YN F
Sbjct: 131 TSPFIGLFGTVWGIMSALKGISAAGSASLETVAGPIGAALVATGVGIAVAVPAVLVYNYF 190
Query: 200 IEDSKKFAMQMEGFANEF 217
+ K A ++ FA++F
Sbjct: 191 LRRLKLTAADLDDFAHDF 208
>gi|323698028|ref|ZP_08109940.1| protein TolQ [Desulfovibrio sp. ND132]
gi|323699567|ref|ZP_08111479.1| protein TolQ [Desulfovibrio sp. ND132]
gi|323457960|gb|EGB13825.1| protein TolQ [Desulfovibrio desulfuricans ND132]
gi|323459499|gb|EGB15364.1| protein TolQ [Desulfovibrio desulfuricans ND132]
Length = 233
Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 108/212 (50%), Gaps = 5/212 (2%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D SI L LAVK ++ L S+ SW++I K T R++ + + F + L
Sbjct: 6 DNSILTLLSGATLAVKLVMLFLGCMSLWSWTIIFLKFFTIGTARKKVIQGYEAFVAAGDL 65
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWK---KSCDKGARSPIGIQDRIDRMMDVAIARELE 126
KSL + + LA + A+ E++ K+ R + ++D + R++ I++E+
Sbjct: 66 AKGIKSLGDQES-PLARVASLAIKEFRLLEKAGVNRERKRLLVKDTLRRVLKQGISKEMR 124
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLG 185
+T L FL + ++A +G+ G V G+M F SI S + ++ PGI E+LI+ +G
Sbjct: 125 SLTRNLPFLATCANAAPFIGLFGTVWGIMHSFHSIGMAQSAALATVAPGISEALIATAIG 184
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEF 217
L V+IP++I YN F+ + M FA F
Sbjct: 185 LLVAIPATIFYNYFLGKLNEVESGMVDFAGAF 216
>gi|304313302|ref|YP_003812900.1| MotA/TolQ/ExbB proton channel protein [gamma proteobacterium HdN1]
gi|301799035|emb|CBL47278.1| MotA/TolQ/ExbB proton channel protein [gamma proteobacterium HdN1]
Length = 243
Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 101/206 (49%), Gaps = 11/206 (5%)
Query: 24 VKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV---CKSLKNHH 80
V + +L FS+L+W+VI K++ F L R + + FW +L+ C
Sbjct: 12 VTATLWVLLTFSLLTWTVIFAKAIQFSMLNRTDKGYADKFWQSGTLQQAACDCTGKAPMC 71
Query: 81 NIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSS 140
NI A A G R + R++R + + E + L+ L S+ S
Sbjct: 72 NIARAGFQAMATHGGGNLGTGGKR-----EHRLERHLRTQLHAERRSLEGGLTLLASIGS 126
Query: 141 AGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNK 198
VG+ G V+G+M Q I +G S +VV+ P I E+L++ +G+ V+IP+ +AYN
Sbjct: 127 TAPFVGLFGTVIGIMRALQDIGTSGSASLDVVAGP-IGEALLATGIGIAVAIPAVLAYNF 185
Query: 199 FIEDSKKFAMQMEGFANEFSAILSRQ 224
F+ SK A+++E FA +F AI Q
Sbjct: 186 FLRRSKLIALRLEDFAGDFLAIAGDQ 211
>gi|302134731|ref|ZP_07260721.1| biopolymer transport protein ExbB [Pseudomonas syringae pv. tomato
NCPPB 1108]
Length = 228
Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 107/208 (51%), Gaps = 12/208 (5%)
Query: 24 VKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCK-------SL 76
V ++ L +FS+LSW++++ KS ++ + Q ++F + FWS L T + +L
Sbjct: 3 VPAVLWALIVFSVLSWALLLIKSAQYVRQKSQNKQFTKAFWSAPDLLTAAEHSAQYPGAL 62
Query: 77 KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLG 136
N G A+ A+ E ++ + A + I DR++R + I +E + + L
Sbjct: 63 ARIANSGFEAM---AVDESPRTTQQLAHT-INRSDRLERNLRQQIQKERRALESGQAILA 118
Query: 137 SMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCVSIPSSIA 195
S+ S +G+ G V G+M QSI S ++ ++ G I +L++ +G+ V++P+ +
Sbjct: 119 SIGSTAPFIGLFGTVWGIMEALQSIGVTGSASLEAVAGPIGHALVATGVGIAVAVPAVLI 178
Query: 196 YNKFIEDSKKFAMQMEGFANEFSAILSR 223
YN F+ K M+ FA++F A+ R
Sbjct: 179 YNFFLRRLKLAVADMDDFAHDFDALAQR 206
>gi|119356687|ref|YP_911331.1| MotA/TolQ/ExbB proton channel [Chlorobium phaeobacteroides DSM 266]
gi|119354036|gb|ABL64907.1| Cell division and transport-associated protein TolQ [Chlorobium
phaeobacteroides DSM 266]
Length = 225
Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 118/229 (51%), Gaps = 18/229 (7%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVI------IQKSVNFITLRRQFREFEQLFW 64
+ IF + G AV ++ +L FS++SW++I + KS+ ++ REF F+
Sbjct: 6 VGIFFMLSDAGPAVLAVLIVLLGFSVVSWAIIAFKFGYVNKSI------KESREFLDCFF 59
Query: 65 SGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDK-GARSPIGIQDRIDRMMDVAIAR 123
S++ + + + + LA +F SA E++ ++ G R +++R+ R + +
Sbjct: 60 ELSSVDKIFVESEKYRSSSLARVFRSAYIEYRALVERNGERH---VEERVARAVKREVNA 116
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISI 182
E + + + FL ++ + +G+ G V G+M FQ I S ++ S+ PGI E+L++
Sbjct: 117 ESKRLVYLVPFLATVGNTAPFIGLFGTVWGIMTSFQQIGLTQSASLASVAPGISEALVAT 176
Query: 183 LLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEF-SAILSRQTEGNIS 230
GL +IP+ IAYN F + +E F+ EF +A + +G++S
Sbjct: 177 AAGLVAAIPAVIAYNYFTQQIALIDRDLEDFSGEFVTACIRNIQKGSVS 225
>gi|213971562|ref|ZP_03399672.1| biopolymer transport protein ExbB [Pseudomonas syringae pv. tomato
T1]
gi|237797879|ref|ZP_04586340.1| biopolymer transport protein ExbB [Pseudomonas syringae pv. oryzae
str. 1_6]
gi|237806025|ref|ZP_04592729.1| biopolymer transport protein ExbB [Pseudomonas syringae pv. oryzae
str. 1_6]
gi|301383609|ref|ZP_07232027.1| biopolymer transport protein ExbB [Pseudomonas syringae pv. tomato
Max13]
gi|302059434|ref|ZP_07250975.1| biopolymer transport protein ExbB [Pseudomonas syringae pv. tomato
K40]
gi|213923665|gb|EEB57250.1| biopolymer transport protein ExbB [Pseudomonas syringae pv. tomato
T1]
gi|331020729|gb|EGI00786.1| biopolymer transport protein ExbB [Pseudomonas syringae pv. oryzae
str. 1_6]
gi|331027135|gb|EGI07190.1| biopolymer transport protein ExbB [Pseudomonas syringae pv. oryzae
str. 1_6]
Length = 235
Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 107/208 (51%), Gaps = 12/208 (5%)
Query: 24 VKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCK-------SL 76
V ++ L +FS+LSW++++ KS ++ + Q ++F + FWS L T + +L
Sbjct: 10 VPAVLWALIVFSVLSWALLLIKSAQYVRQKSQNKQFTKAFWSAPDLLTAAEHSAQYPGAL 69
Query: 77 KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLG 136
N G A+ A+ E ++ + A + I DR++R + I +E + + L
Sbjct: 70 ARIANSGFEAM---AVDESPRTTQQLAHT-INRSDRLERNLRQQIQKERRALESGQAILA 125
Query: 137 SMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCVSIPSSIA 195
S+ S +G+ G V G+M QSI S ++ ++ G I +L++ +G+ V++P+ +
Sbjct: 126 SIGSTAPFIGLFGTVWGIMEALQSIGVTGSASLEAVAGPIGHALVATGVGIAVAVPAVLI 185
Query: 196 YNKFIEDSKKFAMQMEGFANEFSAILSR 223
YN F+ K M+ FA++F A+ R
Sbjct: 186 YNFFLRRLKLAVADMDDFAHDFDALAQR 213
>gi|330957254|gb|EGH57514.1| biopolymer transport protein ExbB [Pseudomonas syringae pv.
maculicola str. ES4326]
Length = 228
Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 106/206 (51%), Gaps = 8/206 (3%)
Query: 24 VKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIG 83
V ++ L +FS+LSW++++ KS ++ + Q ++F + FWS L T + +
Sbjct: 3 VPAVLWALIVFSVLSWALLLIKSAQYVRQKSQNKQFTKAFWSAPDLLTAAEHAAQYPG-A 61
Query: 84 LAAIFMS-----AMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSM 138
LA I S A+ E ++ + A + I DR++R + I +E + + L S+
Sbjct: 62 LARIANSGFEAMAVDESPRTTQQLAHT-INRSDRLERNLRQQIQKERRALESGQAILASI 120
Query: 139 SSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCVSIPSSIAYN 197
S +G+ G V G+M QSI S ++ ++ G I +L++ +G+ V++P+ + YN
Sbjct: 121 GSTAPFIGLFGTVWGIMEALQSIGLTGSASLEAVAGPIGHALVATGVGIAVAVPAVLIYN 180
Query: 198 KFIEDSKKFAMQMEGFANEFSAILSR 223
F+ K M+ FA++F A+ R
Sbjct: 181 FFLRRLKLAVADMDDFAHDFDALAQR 206
>gi|330987984|gb|EGH86087.1| biopolymer transport protein ExbB [Pseudomonas syringae pv.
lachrymans str. M301315]
Length = 235
Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 107/208 (51%), Gaps = 12/208 (5%)
Query: 24 VKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCK-------SL 76
V ++ L +FS+LSW++++ KS ++ + Q ++F + FWS L T + +L
Sbjct: 10 VPAVLWALILFSVLSWALLLIKSAQYVRQKSQNKQFTKAFWSAPDLLTAAEHSAQYPGAL 69
Query: 77 KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLG 136
N G A+ A+ E ++ + A + I DR++R + I +E + + L
Sbjct: 70 ARIANSGFEAM---AVDESPRTTQQLAHT-INRSDRLERNLRQQIQKERRALESGQAILA 125
Query: 137 SMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCVSIPSSIA 195
S+ S +G+ G V G+M QSI S ++ ++ G I +L++ +G+ V++P+ +
Sbjct: 126 SIGSTAPFIGLFGTVWGIMDALQSIGVTGSASLEAVAGPIGHALVATGVGIAVAVPAVLI 185
Query: 196 YNKFIEDSKKFAMQMEGFANEFSAILSR 223
YN F+ K M+ FA++F A+ R
Sbjct: 186 YNFFLRRLKLAVADMDDFAHDFDALAQR 213
>gi|28867502|ref|NP_790121.1| biopolymer transport protein ExbB [Pseudomonas syringae pv. tomato
str. DC3000]
gi|28850736|gb|AAO53816.1| biopolymer transport protein ExbB, putative [Pseudomonas syringae
pv. tomato str. DC3000]
Length = 235
Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 107/208 (51%), Gaps = 12/208 (5%)
Query: 24 VKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCK-------SL 76
V ++ L +FS+LSW++++ KS ++ + Q ++F + FWS L T + +L
Sbjct: 10 VPAVLWALIVFSVLSWALLLIKSAQYVRQKSQNKQFTKAFWSAPDLLTAAEHSAQYPGAL 69
Query: 77 KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLG 136
N G A+ A+ E ++ + A + I DR++R + I +E + + L
Sbjct: 70 ARIANSGFEAM---AVDESPRTTQQLAHT-INRSDRLERNLRQQIQKERRALESGQAILA 125
Query: 137 SMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCVSIPSSIA 195
S+ S +G+ G V G+M QSI S ++ ++ G I +L++ +G+ V++P+ +
Sbjct: 126 SIGSTAPFIGLFGTVWGIMEALQSIGLTGSASLEAVAGPIGHALVATGVGIAVAVPAVLI 185
Query: 196 YNKFIEDSKKFAMQMEGFANEFSAILSR 223
YN F+ K M+ FA++F A+ R
Sbjct: 186 YNFFLRRLKLAVADMDDFAHDFDALAQR 213
>gi|289673477|ref|ZP_06494367.1| TonB system transport protein ExbB2 [Pseudomonas syringae pv.
syringae FF5]
Length = 242
Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 101/198 (51%), Gaps = 7/198 (3%)
Query: 25 KCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHH---- 80
+I LL +FS+ +W + + K V F L+ Q R+F + FW+ SL++ + +
Sbjct: 13 HAVIWLLVLFSVATWGLALLKGVQFSRLKSQDRKFHKRFWATSSLDSAAQLAQEQPGAAA 72
Query: 81 NIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSS 140
+ LA + + ++ D I QDR++R + I RE + L+ L S+ S
Sbjct: 73 RVALAGYAAIQVPDGAQANDLS--QSINHQDRLERALRQQIVRERRSLETGLAILASIGS 130
Query: 141 AGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCVSIPSSIAYNKF 199
+G+ G V G+M + I+ S ++ ++ G I +L++ +G+ V++P+ + YN F
Sbjct: 131 TSPFIGLFGTVWGIMSALKGISAAGSASLETVAGPIGAALVATGVGIAVAVPAVLVYNYF 190
Query: 200 IEDSKKFAMQMEGFANEF 217
+ K A ++ FA++F
Sbjct: 191 LRRLKLTAADLDDFAHDF 208
>gi|33519795|ref|NP_878627.1| TolQ protein [Candidatus Blochmannia floridanus]
gi|33504140|emb|CAD83402.1| TolQ protein [Candidatus Blochmannia floridanus]
Length = 249
Score = 89.4 bits (220), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 105/224 (46%), Gaps = 10/224 (4%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
++I LF++ V+ I +L IFSI+SWS+I + +R+ + FE FWSG L
Sbjct: 1 MNILGLFLKTNFLVQITIFILIIFSIVSWSIIFHRVFILKYEQRKLKSFENKFWSGIELP 60
Query: 71 TVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ + N N + IF E+ + I R R+M+ + ELE++
Sbjct: 61 RLYIEISNKKNQLSSVEHIFYIGFKEFSRLHKIKKCLSETIASRTLRVMNNTLNLELEKL 120
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFF---QSIAGYYSNNVVS-----IPGIIESLI 180
+ +G++ S VG+ G VLG++ F I+ SN+ + PGI E+LI
Sbjct: 121 ESYIPLIGTIGSISPYVGLFGTVLGIIHVFIALDKISAVNSNHHMGHIHLIAPGIAEALI 180
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
S +GL V+IP+ +A+N F EF IL RQ
Sbjct: 181 STAIGLFVAIPAVMAFNYLTTQINNLNQNFNNFIEEFITILYRQ 224
>gi|66043406|ref|YP_233247.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. syringae
B728a]
gi|71737469|ref|YP_277134.1| biopolymer transport protein ExbB [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|289647956|ref|ZP_06479299.1| biopolymer transport protein ExbB [Pseudomonas syringae pv. aesculi
str. 2250]
gi|298489475|ref|ZP_07007486.1| MotA/TolQ/ExbB proton channel family protein [Pseudomonas
savastanoi pv. savastanoi NCPPB 3335]
gi|63254113|gb|AAY35209.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. syringae
B728a]
gi|71558022|gb|AAZ37233.1| biopolymer transport protein ExbB, putative [Pseudomonas syringae
pv. phaseolicola 1448A]
gi|298156049|gb|EFH97158.1| MotA/TolQ/ExbB proton channel family protein [Pseudomonas
savastanoi pv. savastanoi NCPPB 3335]
gi|320331416|gb|EFW87357.1| biopolymer transport protein ExbB [Pseudomonas syringae pv.
glycinea str. race 4]
gi|331012799|gb|EGH92855.1| biopolymer transport protein ExbB [Pseudomonas syringae pv. tabaci
ATCC 11528]
Length = 235
Score = 89.4 bits (220), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 107/208 (51%), Gaps = 12/208 (5%)
Query: 24 VKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCK-------SL 76
V ++ L +FS+LSW++++ KS ++ + Q ++F + FWS L T + +L
Sbjct: 10 VPAVLWALILFSVLSWALLLIKSAQYVRQKSQNKQFTKAFWSAPDLLTAAEHSAQYPGAL 69
Query: 77 KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLG 136
N G A+ A+ E ++ + A + I DR++R + I +E + + L
Sbjct: 70 ARIANSGFEAM---AVDESPRTTQQLAHT-INRSDRLERNLRQQIQKERRALESGQAILA 125
Query: 137 SMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCVSIPSSIA 195
S+ S +G+ G V G+M QSI S ++ ++ G I +L++ +G+ V++P+ +
Sbjct: 126 SIGSTAPFIGLFGTVWGIMEALQSIGVTGSASLEAVAGPIGHALVATGVGIAVAVPAVLI 185
Query: 196 YNKFIEDSKKFAMQMEGFANEFSAILSR 223
YN F+ K M+ FA++F A+ R
Sbjct: 186 YNFFLRRLKLAVADMDDFAHDFDALAQR 213
>gi|220904135|ref|YP_002479447.1| protein TolQ [Desulfovibrio desulfuricans subsp. desulfuricans str.
ATCC 27774]
gi|219868434|gb|ACL48769.1| protein TolQ [Desulfovibrio desulfuricans subsp. desulfuricans str.
ATCC 27774]
Length = 231
Score = 89.4 bits (220), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 102/210 (48%), Gaps = 2/210 (0%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
M+ S F++ Q L K ++ LL + SI SW ++IQK + E F +
Sbjct: 1 MEFSFFSMIAQASLVAKAVLALLVVMSITSWGLMIQKFFALSAANNKALEGTTGFEKAPN 60
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
L +SL + + L I + E+ +S + G S + + D + R + + EL +
Sbjct: 61 LREAVQSLGSDPSSPLYYIAHQGVLEFNRSKELGNSSEV-VVDNVRRALRQGVGSELSRL 119
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLC 187
LS L + ++ +G+ G V G+M F SI S ++ ++ PGI E+L++ +GL
Sbjct: 120 QRSLSLLATTANTAPFIGLFGTVWGIMSSFHSIGMLKSASLATVAPGISEALVATAIGLA 179
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEF 217
V++P++I +N F+ + + FA F
Sbjct: 180 VAVPATIGFNVFMGKLSQVDTLLVNFAGVF 209
>gi|330891871|gb|EGH24532.1| biopolymer transport protein ExbB [Pseudomonas syringae pv. mori
str. 301020]
Length = 228
Score = 89.0 bits (219), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 107/208 (51%), Gaps = 12/208 (5%)
Query: 24 VKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCK-------SL 76
V ++ L +FS+LSW++++ KS ++ + Q ++F + FWS L T + +L
Sbjct: 3 VPAVLWALILFSVLSWALLLIKSAQYVRQKSQNKQFTKAFWSAPDLLTAAEHSAQYPGAL 62
Query: 77 KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLG 136
N G A+ A+ E ++ + A + I DR++R + I +E + + L
Sbjct: 63 ARIANSGFEAM---AVDESPRTTQQLAHT-INRSDRLERNLRQQIQKERRALESGQAILA 118
Query: 137 SMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCVSIPSSIA 195
S+ S +G+ G V G+M QSI S ++ ++ G I +L++ +G+ V++P+ +
Sbjct: 119 SIGSTAPFIGLFGTVWGIMEALQSIGVTGSASLEAVAGPIGHALVATGVGIAVAVPAVLI 178
Query: 196 YNKFIEDSKKFAMQMEGFANEFSAILSR 223
YN F+ K M+ FA++F A+ R
Sbjct: 179 YNFFLRRLKLAVADMDDFAHDFDALAQR 206
>gi|257482558|ref|ZP_05636599.1| biopolymer transport protein ExbB, putative [Pseudomonas syringae
pv. tabaci ATCC 11528]
gi|289626255|ref|ZP_06459209.1| biopolymer transport protein ExbB [Pseudomonas syringae pv. aesculi
str. NCPPB3681]
gi|320326518|gb|EFW82569.1| biopolymer transport protein ExbB [Pseudomonas syringae pv.
glycinea str. B076]
gi|330866646|gb|EGH01355.1| biopolymer transport protein ExbB [Pseudomonas syringae pv. aesculi
str. 0893_23]
Length = 228
Score = 89.0 bits (219), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 107/208 (51%), Gaps = 12/208 (5%)
Query: 24 VKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCK-------SL 76
V ++ L +FS+LSW++++ KS ++ + Q ++F + FWS L T + +L
Sbjct: 3 VPAVLWALILFSVLSWALLLIKSAQYVRQKSQNKQFTKAFWSAPDLLTAAEHSAQYPGAL 62
Query: 77 KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLG 136
N G A+ A+ E ++ + A + I DR++R + I +E + + L
Sbjct: 63 ARIANSGFEAM---AVDESPRTTQQLAHT-INRSDRLERNLRQQIQKERRALESGQAILA 118
Query: 137 SMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCVSIPSSIA 195
S+ S +G+ G V G+M QSI S ++ ++ G I +L++ +G+ V++P+ +
Sbjct: 119 SIGSTAPFIGLFGTVWGIMEALQSIGVTGSASLEAVAGPIGHALVATGVGIAVAVPAVLI 178
Query: 196 YNKFIEDSKKFAMQMEGFANEFSAILSR 223
YN F+ K M+ FA++F A+ R
Sbjct: 179 YNFFLRRLKLAVADMDDFAHDFDALAQR 206
>gi|303328318|ref|ZP_07358756.1| protein TolQ [Desulfovibrio sp. 3_1_syn3]
gi|302861648|gb|EFL84584.1| protein TolQ [Desulfovibrio sp. 3_1_syn3]
Length = 231
Score = 89.0 bits (219), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 99/193 (51%), Gaps = 2/193 (1%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
M+ S F++ Q L K ++ LL + SI SW ++IQK + R+ + F S
Sbjct: 1 MEFSFFSMIAQASLIAKAVLALLVLMSIGSWGMMIQKFIALNAASRKALSGAERFDKAAS 60
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
L +SL + L I + E+ +S + G S + + D + R + +A EL +
Sbjct: 61 LREAVQSLGSDPASPLYYIAHQGVLEFNRSKELGNSSEV-VVDNVRRALRQGVASELARL 119
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLC 187
LS L + ++ +G+ G V G+M F SI S ++ ++ PGI E+L++ +GL
Sbjct: 120 QRSLSLLATTANTAPFIGLFGTVWGIMNSFHSIGMLKSASLATVAPGISEALVATAIGLG 179
Query: 188 VSIPSSIAYNKFI 200
V++P+++ +N F+
Sbjct: 180 VAVPATVGFNIFM 192
>gi|212704942|ref|ZP_03313070.1| hypothetical protein DESPIG_03009 [Desulfovibrio piger ATCC 29098]
gi|212671606|gb|EEB32089.1| hypothetical protein DESPIG_03009 [Desulfovibrio piger ATCC 29098]
Length = 231
Score = 89.0 bits (219), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 108/217 (49%), Gaps = 2/217 (0%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
M+ S F++ Q L K ++ +L + S+ SW ++IQK++ R+ + LF S
Sbjct: 1 MEFSFFSMISQASLVAKIVLCILVLMSVGSWGMMIQKTLALNAAYRKALQGTDLFEKAPS 60
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
L SL + L + + E+ +S + G S I + D + R + +A E+ +
Sbjct: 61 LREAVLSLGSDRASPLYFVAHQGVMEFNRSKEAGNSSEI-VVDNVRRSLRQGVASEMARL 119
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLC 187
LS L + ++ +G+ G V G+M F SI S ++ ++ PGI E+L++ +GL
Sbjct: 120 ERSLSLLATTANTAPFIGLFGTVWGIMHSFHSIGMLKSASLATVAPGISEALVATAIGLG 179
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
V++P++I +N F+ + + FA F + R+
Sbjct: 180 VAVPATIGFNIFMGKLSQVDTLLVNFAGVFLNRVQRE 216
>gi|197121113|ref|YP_002133064.1| protein TolQ [Anaeromyxobacter sp. K]
gi|220915814|ref|YP_002491118.1| protein TolQ [Anaeromyxobacter dehalogenans 2CP-1]
gi|196170962|gb|ACG71935.1| protein TolQ [Anaeromyxobacter sp. K]
gi|219953668|gb|ACL64052.1| protein TolQ [Anaeromyxobacter dehalogenans 2CP-1]
Length = 257
Score = 89.0 bits (219), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 109/206 (52%), Gaps = 8/206 (3%)
Query: 27 IITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAA 86
++ LL S +SW++I++K + + Q +F + FW + L+ + ++ ++ L+
Sbjct: 49 VLALLLGASAVSWAIIVKKWLQIRRAQDQSVKFLETFWQSKRLDAIYQAAESLGASPLSH 108
Query: 87 IF------MSAMSEWKKSCDKGARSP-IGIQDRIDRMMDVAIARELEEITEKLSFLGSMS 139
+F +S ++ K D GA S +G + ++R + A A E+ + ++ FLG+ +
Sbjct: 109 VFRAGYVELSKVTARKNEGDPGAMSDQLGGIENVERALKRAAASEVTALERQVPFLGTTA 168
Query: 140 SAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCVSIPSSIAYNK 198
SA VG+ G V G+M F I + N+ ++ I E+LI+ +GL +IP+ +AYN
Sbjct: 169 SAAPFVGLFGTVWGIMRAFHEIYLMGNANLATVAKPISEALIATAVGLFAAIPAVVAYNF 228
Query: 199 FIEDSKKFAMQMEGFANEFSAILSRQ 224
F+ + +M F+N+F I+ R
Sbjct: 229 FLSKIRVLDSEMTNFSNDFLNIVRRH 254
>gi|86157090|ref|YP_463875.1| MotA/TolQ/ExbB proton channel [Anaeromyxobacter dehalogenans 2CP-C]
gi|85773601|gb|ABC80438.1| Cell division and transport-associated protein TolQ
[Anaeromyxobacter dehalogenans 2CP-C]
Length = 247
Score = 89.0 bits (219), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 109/206 (52%), Gaps = 8/206 (3%)
Query: 27 IITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAA 86
++ LL S +SW++I++K + + Q +F + FW + L+ + ++ ++ L+
Sbjct: 39 VLALLLGASAVSWAIIVKKWLQIRRAQDQSVKFLETFWQSKRLDAIYQAAESLGASPLSH 98
Query: 87 IF------MSAMSEWKKSCDKGARSP-IGIQDRIDRMMDVAIARELEEITEKLSFLGSMS 139
+F +S ++ K D GA S +G + ++R + A A E+ + ++ FLG+ +
Sbjct: 99 VFRAGYVELSKVTARKNEGDPGAMSDQLGGIENVERALKRAAASEVTALERQVPFLGTTA 158
Query: 140 SAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCVSIPSSIAYNK 198
SA VG+ G V G+M F I + N+ ++ I E+LI+ +GL +IP+ +AYN
Sbjct: 159 SAAPFVGLFGTVWGIMRAFHEIYLMGNANLATVAKPISEALIATAVGLFAAIPAVVAYNF 218
Query: 199 FIEDSKKFAMQMEGFANEFSAILSRQ 224
F+ + +M F+N+F I+ R
Sbjct: 219 FLSKIRVLDSEMTNFSNDFLNIVRRH 244
>gi|90426011|ref|YP_534381.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris BisB18]
gi|90108025|gb|ABD90062.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris BisB18]
Length = 301
Score = 88.6 bits (218), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 105/215 (48%), Gaps = 8/215 (3%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D++ +FM VK ++ L + S+L+WSV + K++ T RR+ + + Q+L
Sbjct: 75 DLTPIGMFMAADSIVKMVMIGLALASVLTWSVWLTKTIELATARRRLGRDLGIVEASQTL 134
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
C L++ + +A + +A E ++S D GI++R+ + A +T
Sbjct: 135 REACAKLQDADS-DIAVLARAAAGELQRSQDTANHD--GIKERVGSLFSRIEAGAARRMT 191
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCV 188
L ++ S G VG+ G V G+M F I+ + N+ V PGI E+L++ LGL
Sbjct: 192 RGTGILATIGSIGPFVGLFGTVWGIMNAFIGISKSQTTNLAVVAPGIAEALLATALGLVA 251
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
+IP+ + YN F + M G N+ SA L R
Sbjct: 252 AIPAVVIYNMF----ARSIMGYRGLLNDGSAELMR 282
>gi|78224720|ref|YP_386467.1| MotA/TolQ/ExbB proton channel [Geobacter metallireducens GS-15]
gi|78195975|gb|ABB33742.1| Cell division and transport-associated protein TolQ [Geobacter
metallireducens GS-15]
Length = 224
Score = 88.6 bits (218), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 95/200 (47%), Gaps = 11/200 (5%)
Query: 34 FSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMS 93
FS++SW++I K + + F FW + + V L N L +F S
Sbjct: 21 FSVVSWAIIFFKLLQVYRANSESERFLDFFWKTKRFDAVNSQLDRFTNSPLTVLFSEGYS 80
Query: 94 EWKKSCDKGAR--------SPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLV 145
E K+ +KG + + +G + I R + A E+ + + ++FL + S +
Sbjct: 81 ELKRLVEKGDQKEELDVMSTELGGIENIARALRRATTSEITRLEKYVTFLATTGSTTPFI 140
Query: 146 GILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDS 203
G+ G V G+M F+ I G S VV+ PGI E+LI+ +GL +IP+ +AYN F
Sbjct: 141 GLFGTVWGIMTAFKGIGETGSASLAVVA-PGISEALIATAIGLVAAIPAVMAYNHFQYKI 199
Query: 204 KKFAMQMEGFANEFSAILSR 223
K M+ F+ EF I+ R
Sbjct: 200 KVLIATMDNFSTEFLNIVQR 219
>gi|213420649|ref|ZP_03353715.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Typhi str. E01-6750]
Length = 179
Score = 88.6 bits (218), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 86/169 (50%), Gaps = 3/169 (1%)
Query: 59 FEQLFWSGQSLETVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRM 116
FE FWSG L + + + + G IF S E+ + + +P + + R
Sbjct: 1 FEDKFWSGIELSRLYQESQGRRDSLSGSEQIFYSGFKEFVRLHRANSHAPEAVVEGASRA 60
Query: 117 MDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGI 175
M +++ RELE + + FLG++ S +G+ G V G+M F ++ + + PGI
Sbjct: 61 MRISMNRELETLETHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMVAPGI 120
Query: 176 IESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
E+LI+ +GL +IP+ +AYN+ + K + + F EF+AIL RQ
Sbjct: 121 AEALIATAIGLFAAIPAVMAYNRLNQRVNKLELNYDNFMEEFTAILHRQ 169
>gi|213619068|ref|ZP_03372894.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Typhi str. E98-2068]
Length = 182
Score = 88.2 bits (217), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 86/169 (50%), Gaps = 3/169 (1%)
Query: 59 FEQLFWSGQSLETVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRM 116
FE FWSG L + + + + G IF S E+ + + +P + + R
Sbjct: 4 FEDKFWSGIELSRLYQESQGRRDSLSGSEQIFYSGFKEFVRLHRANSHAPEAVVEGASRA 63
Query: 117 MDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGI 175
M +++ RELE + + FLG++ S +G+ G V G+M F ++ + + PGI
Sbjct: 64 MRISMNRELETLETHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMVAPGI 123
Query: 176 IESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
E+LI+ +GL +IP+ +AYN+ + K + + F EF+AIL RQ
Sbjct: 124 AEALIATAIGLFAAIPAVMAYNRLNQRVNKLELNYDNFMEEFTAILHRQ 172
>gi|312116244|ref|YP_004013840.1| MotA/TolQ/ExbB proton channel [Rhodomicrobium vannielii ATCC 17100]
gi|312116280|ref|YP_004013876.1| MotA/TolQ/ExbB proton channel [Rhodomicrobium vannielii ATCC 17100]
gi|311221373|gb|ADP72741.1| MotA/TolQ/ExbB proton channel [Rhodomicrobium vannielii ATCC 17100]
gi|311221409|gb|ADP72777.1| MotA/TolQ/ExbB proton channel [Rhodomicrobium vannielii ATCC 17100]
Length = 246
Score = 88.2 bits (217), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 105/220 (47%), Gaps = 8/220 (3%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
++ LF Q + VK ++ LL + S W +I KS+ L + + + G L
Sbjct: 17 LTPLELFQQADIVVKAVMGLLILASAWGWGIIAAKSIQLAILNARAKRLLKSLAHGVPLT 76
Query: 71 TVCKS-LKNHHNIGLAAIFMSAMSEWKKSCD--KGARSPIGIQDRIDRMMDVAIARELEE 127
+ ++ LK N L ++ S + E K+S + A + DR+ R+ +A + L+
Sbjct: 77 DLSETFLKVQPNDPLRVVYQSMIDENKRSAELRHSAAQQESLLDRVYRVGQLASSNTLDR 136
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV---VSIPGIIESLISILL 184
+ L L ++ + VG+ G V G+M FQ IA SNN V PGI E+L + L
Sbjct: 137 LKGGLQSLATIGAVSPFVGLFGTVWGIMNSFQGIAA--SNNTSLAVVAPGIAEALFATAL 194
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
GL +IP+ + YN+ + +F ++ F + LSRQ
Sbjct: 195 GLVAAIPAVVFYNRINGNIGQFGKSLKTFVEVYGVELSRQ 234
>gi|229587785|ref|YP_002869904.1| putative transporter-like membrane protein [Pseudomonas fluorescens
SBW25]
gi|229359651|emb|CAY46494.1| putative transport-related membrane protein [Pseudomonas
fluorescens SBW25]
Length = 239
Score = 88.2 bits (217), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 104/208 (50%), Gaps = 13/208 (6%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHH----- 80
+I LL +FS+ +W + + K V F L+ Q R F + FW+ SL++ + +
Sbjct: 13 AVIWLLVVFSVATWGLALLKGVQFGRLKAQDRRFHKQFWAASSLDSAAELAETQPGAAAR 72
Query: 81 --NIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSM 138
G AAI + E + D I QDR++R + I RE + L+ + S+
Sbjct: 73 VAQAGYAAI---QVGETPHAADLS--QAINHQDRLERALRQQIVRERRSLETGLAVVASI 127
Query: 139 SSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCVSIPSSIAYN 197
S +G+ G V G+M + I+ S ++ ++ G I +L++ +G+ V++P+ + YN
Sbjct: 128 GSTSPFIGLFGTVWGIMEALKGISAAGSASLETVAGPIGAALVATGVGIAVAVPAVLVYN 187
Query: 198 KFIEDSKKFAMQMEGFANEFSAILSRQT 225
F+ K A ++ FA++F ++ + +
Sbjct: 188 YFLRRLKLTAADLDDFAHDFYSLAQKNS 215
>gi|226942654|ref|YP_002797727.1| TolQ-like protein [Azotobacter vinelandii DJ]
gi|226717581|gb|ACO76752.1| TolQ-like protein [Azotobacter vinelandii DJ]
Length = 234
Score = 87.8 bits (216), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 111/222 (50%), Gaps = 2/222 (0%)
Query: 7 AIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG 66
AI +S++ L + VK ++ L + S+ SW +I+++S+ R R+F + F
Sbjct: 4 AIEPMSVWGLIEEASPLVKLVMLTLVLASLASWYLIVRRSLLLGASERLCRDFLRRFRGS 63
Query: 67 QSLETVCKSLKN-HHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
L + + + GL +F + E+++ + +P + + ++R + VAI+ E
Sbjct: 64 AELAPLYREAAELPADAGLERLFRAGYGEFQQLGGEPGVAPEAVIEGVERSLLVAISEEE 123
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILL 184
E + + L+ L S+ S +G+ G V G+M F ++ + ++ PGI E+LI+ +
Sbjct: 124 ERLGKGLALLASIGSVSPYIGLFGTVWGIMNSFIGLSQVRQATLSTVAPGIAEALIATAI 183
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
GL +IP+ +AYN+F + + F NE L R+ +
Sbjct: 184 GLFAAIPAVLAYNRFSARVASLSSRYYAFGNELQGRLHRRLQ 225
>gi|77456447|ref|YP_345952.1| MotA/TolQ/ExbB proton channel [Pseudomonas fluorescens Pf0-1]
gi|77380450|gb|ABA71963.1| outer membrane transport energization protein ExbB [Pseudomonas
fluorescens Pf0-1]
Length = 241
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 102/200 (51%), Gaps = 13/200 (6%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL-------ETVCKSLKN 78
+I LL +FS+ +W + + K+V F L+ Q R+F + FW+ SL ET +
Sbjct: 14 AVIWLLVVFSVATWGLALLKAVQFGRLKAQDRKFHKRFWAASSLDSAAELSETQPGAAAR 73
Query: 79 HHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSM 138
G AAI + E ++ D I QDR++R + I RE + L+ + S+
Sbjct: 74 VAQAGYAAI---QVGEAPQANDLS--QAINHQDRLERALRQQIVRERRSLETGLAVVASI 128
Query: 139 SSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCVSIPSSIAYN 197
S +G+ G V G+M + I+ S ++ ++ G I +L++ +G+ V++P+ + YN
Sbjct: 129 GSTSPFIGLFGTVWGIMEALKGISAAGSASLETVAGPIGAALVATGVGIAVAVPAVLVYN 188
Query: 198 KFIEDSKKFAMQMEGFANEF 217
F+ K A ++ FA++F
Sbjct: 189 YFLRRLKLTAADLDDFAHDF 208
>gi|312958329|ref|ZP_07772850.1| TonB system transport protein [Pseudomonas fluorescens WH6]
gi|311287393|gb|EFQ65953.1| TonB system transport protein [Pseudomonas fluorescens WH6]
Length = 239
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 106/208 (50%), Gaps = 13/208 (6%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHH----- 80
+I LL +FS+++W + + K V F L+ Q R+F + FW+ SL++ + +
Sbjct: 13 TVIWLLVVFSVVTWGLALLKGVQFGRLKAQDRKFHRQFWAASSLDSAAELAETQPGAAAR 72
Query: 81 --NIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSM 138
G AAI + + + D I QDR++R + I RE + L+ + S+
Sbjct: 73 VAQAGYAAI---QVGDAPHAADLS--QAINHQDRLERALRQQIVRERRSLETGLAVVASI 127
Query: 139 SSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCVSIPSSIAYN 197
S +G+ G V G+M + I+ S ++ ++ G I +L++ +G+ V++P+ + YN
Sbjct: 128 GSTSPFIGLFGTVWGIMEALKGISAAGSASLETVAGPIGAALVATGVGIAVAVPAVLVYN 187
Query: 198 KFIEDSKKFAMQMEGFANEFSAILSRQT 225
F+ K A ++ FA++F ++ + +
Sbjct: 188 YFLRRLKLTAADLDDFAHDFYSLAQKNS 215
>gi|254428812|ref|ZP_05042519.1| protein TolQ [Alcanivorax sp. DG881]
gi|196194981|gb|EDX89940.1| protein TolQ [Alcanivorax sp. DG881]
Length = 239
Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 106/216 (49%), Gaps = 2/216 (0%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D++I+ L L V+ ++ +L + S+ SW +I+ + + + ++F F +L
Sbjct: 3 DMTIWGLVSDASLVVQAVMLVLILASVGSWCLIVLRHLAMRRGEKHQKQFLATFRGEDNL 62
Query: 70 ETVCK-SLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+++ + + H L +F + +E++ SP +Q+ ++R+M I+ + ++
Sbjct: 63 DSLAQLPVPGHRQAALQTLFNAGYAEYQLLHGDWDASPASVQEGVERVMQGVISEQEADL 122
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLC 187
LSFL ++ S +G+ G V G+M F ++ + ++ PGI E+LI+ +GL
Sbjct: 123 EAGLSFLATVGSVSPYIGLFGTVWGIMNSFIGLSQVQQATLSTVAPGIAEALIATAIGLF 182
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
+IP+ IAYN+ ++ F E L R
Sbjct: 183 AAIPAVIAYNRLSARGQRLIASSYAFGTELQQRLHR 218
>gi|322418111|ref|YP_004197334.1| protein TolQ [Geobacter sp. M18]
gi|320124498|gb|ADW12058.1| protein TolQ [Geobacter sp. M18]
Length = 224
Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 93/205 (45%), Gaps = 11/205 (5%)
Query: 34 FSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMS 93
FS++SW +I K + F + FW + + + L + L +F
Sbjct: 21 FSVVSWGIIFYKLLQVYRANGASERFLEFFWKAKRFDAINSQLDRFEHSPLTVLFQEGYG 80
Query: 94 EWKKSCDK--------GARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLV 145
E KK +K + +G D I R + A E+ + + L+FL + + V
Sbjct: 81 ELKKLQEKVEEKADPNTVSTDLGGVDNIARALRRATTSEITRLEKYLTFLATTGATAPFV 140
Query: 146 GILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDS 203
G+ G V G+M F+ I +G S VV+ PGI E+LI+ +GL +IP+ + YN F
Sbjct: 141 GLFGTVWGIMTAFEKIGQSGSASLAVVA-PGIAEALIATAIGLVAAIPAVMGYNHFQHKI 199
Query: 204 KKFAMQMEGFANEFSAILSRQTEGN 228
K +M+ F+ EF I+ R G
Sbjct: 200 KVLISEMDSFSTEFLNIVQRNFAGR 224
>gi|118602712|ref|YP_903927.1| MotA/TolQ/ExbB proton channel [Candidatus Ruthia magnifica str. Cm
(Calyptogena magnifica)]
gi|118567651|gb|ABL02456.1| Cell division and transport-associated protein TolQ [Candidatus
Ruthia magnifica str. Cm (Calyptogena magnifica)]
Length = 223
Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 106/222 (47%), Gaps = 4/222 (1%)
Query: 9 MD-ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
MD +SIF+L + G V+ ++ +L + SI SW++I+ K I + + F Q F +
Sbjct: 1 MDSLSIFSLILSAGFVVQMVMLILILMSIYSWTLILSKKKILIDTNKNIKLFHQNFSANI 60
Query: 68 SLETVC-KSLKNHHN-IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
LE + ++LK N + IF + E + + I +R R+M+ E+
Sbjct: 61 DLEKLAYQTLKKDINQSSMERIFSTGFQELTHTTSDFNQVLIIDAERAYRVMNTMANNEV 120
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILL 184
+ LS L ++S+ +G+ G V G+M F +A V + PGI E+LI+
Sbjct: 121 NRLDSGLSILAMIASSSPYIGLFGTVWGIMHSFIGLASVKQATVAIVAPGIAEALIATAF 180
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
GL +IP++IAYN+ I + + F + + RQ
Sbjct: 181 GLFAAIPATIAYNRLISQVESINNKYTAFVEQLFVLFQRQNR 222
>gi|331019301|gb|EGH99357.1| tolQ protein [Pseudomonas syringae pv. lachrymans str. M302278PT]
Length = 212
Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 101/201 (50%), Gaps = 3/201 (1%)
Query: 30 LLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCK--SLKNHHNIGLAAI 87
+L + S++SW +I+Q+S+ R F+Q F S L + S + G+ +I
Sbjct: 3 ILLLASLVSWFLIVQRSLALRHYERSLDAFQQRFRSEAELAPLYAQASSAQSDSGGIGSI 62
Query: 88 FMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGI 147
F + +E+ + + P + ++R + VAI+ + ++ + L FL ++ S +G+
Sbjct: 63 FQAGYAEYMQLKHRPGIDPDVVLSGVERSLQVAISEQELQLEKGLQFLATVGSVSPYIGL 122
Query: 148 LGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCVSIPSSIAYNKFIEDSKKF 206
G V G+M F ++ + ++ PGI E+LI+ +GL +IP+ IAYN+F +
Sbjct: 123 FGTVWGIMNSFIGLSQVQQATLSTVAPGIAEALIATAIGLFAAIPAVIAYNRFAARGQTL 182
Query: 207 AMQMEGFANEFSAILSRQTEG 227
+ F NE L+R +G
Sbjct: 183 TARYYTFGNELQVRLNRTLQG 203
>gi|77459960|ref|YP_349467.1| MotA/TolQ/ExbB proton channel [Pseudomonas fluorescens Pf0-1]
gi|77383963|gb|ABA75476.1| outer membrane transport energization protein ExbB [Pseudomonas
fluorescens Pf0-1]
Length = 234
Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 106/206 (51%), Gaps = 8/206 (3%)
Query: 24 VKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIG 83
V ++ L +FS++SW++++ KS ++ + Q ++F + FW L T + +
Sbjct: 10 VPGVLWGLVLFSVVSWAILLVKSAQYLRQKTQNKQFSKAFWGAPDLLTAAEHASQYPG-S 68
Query: 84 LAAIFMSA-----MSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSM 138
LA I S + E ++ + A + I DR++R + I +E + + L S+
Sbjct: 69 LARIASSGFEALLVEESPRTTQQLAHT-INRSDRLERNLRQQIQKERRSLENGQAILASI 127
Query: 139 SSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCVSIPSSIAYN 197
S +G+ G V G+M QSI S ++ ++ G I +LI+ +G+ V++P+ + YN
Sbjct: 128 GSTAPFIGLFGTVWGIMEALQSIGASGSASLETVAGPIGHALIATGVGIAVAVPAVLIYN 187
Query: 198 KFIEDSKKFAMQMEGFANEFSAILSR 223
F+ K + M+ FA++F A+ SR
Sbjct: 188 FFLRRLKLASADMDDFAHDFDALASR 213
>gi|262368604|ref|ZP_06061933.1| TolQ protein [Acinetobacter johnsonii SH046]
gi|262316282|gb|EEY97320.1| TolQ protein [Acinetobacter johnsonii SH046]
Length = 232
Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 99/192 (51%), Gaps = 3/192 (1%)
Query: 38 SWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLK-NHHNIGLAAIFMSAMSEWK 96
SW +I + +++ + F+++FWSG L T+ + + N +GL IF + E+
Sbjct: 36 SWYLIAKLHMSYKKAQADDDHFQKIFWSGAELNTLYNNAQLNSKRVGLEDIFYQGLGEFL 95
Query: 97 KSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMG 156
K + A +P + +R++ V ++R+ ++ + L L S+ S VG+ G V G+M
Sbjct: 96 KLKKRNA-APAQTIEGTERILRVGLSRDQSQLEQGLGALASIGSVAPYVGLFGTVWGIMN 154
Query: 157 FFQSIAGYYSNNVVSI-PGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFAN 215
F +A + ++ PGI E+LI+ +GL +IP+ +A+N + + FA
Sbjct: 155 AFIGLADVDQVTLATVAPGIAEALIATAIGLFAAIPAVLAFNHYTGKGETVYSDRALFAE 214
Query: 216 EFSAILSRQTEG 227
E A+L RQ+ G
Sbjct: 215 EMVALLQRQSLG 226
>gi|317153130|ref|YP_004121178.1| MotA/TolQ/ExbB proton channel [Desulfovibrio aespoeensis Aspo-2]
gi|316943381|gb|ADU62432.1| MotA/TolQ/ExbB proton channel [Desulfovibrio aespoeensis Aspo-2]
Length = 234
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 105/212 (49%), Gaps = 4/212 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D +F L LAVK ++ L S+ SW++I K R++ + F S L
Sbjct: 6 DSDLFTLLAGATLAVKMVLLFLAAMSLWSWTIIFYKFFTIGEARKKVMLGYEAFTSAGDL 65
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWK---KSCDKGARSPIGIQDRIDRMMDVAIARELE 126
+ K+L L+ + A+ E++ K+ R + ++D + R++ I++E+
Sbjct: 66 SSGLKALGAKEQSPLSRVSTLAVKEFRLLEKADVNRERKRLLVKDTLRRVLKQGISKEMR 125
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLG 185
+T L FL + ++A +G+ G V G+M F SI S + ++ PGI E+LI+ +G
Sbjct: 126 ILTRNLPFLATCANAAPFIGLFGTVWGIMHSFHSIGLAQSAALATVAPGISEALIATAIG 185
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEF 217
L V+IP++I YN F+ + M FA F
Sbjct: 186 LLVAIPATIFYNYFLGKLNEVESGMIDFAGAF 217
>gi|302189185|ref|ZP_07265858.1| biopolymer transport protein ExbB [Pseudomonas syringae pv.
syringae 642]
Length = 235
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 106/208 (50%), Gaps = 12/208 (5%)
Query: 24 VKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCK-------SL 76
V ++ L + S+LSW++++ KS ++ + Q ++F + FWS L T + +L
Sbjct: 10 VPAVLWALILLSVLSWALLLIKSAQYVRQKSQNKQFTKAFWSAPDLLTAAEHSAQYPGAL 69
Query: 77 KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLG 136
N G A+ A+ E ++ + A + I DR++R + I +E + + L
Sbjct: 70 ARIANSGFEAM---AVDESPRTTQQLAHT-INRSDRLERNLRQQIQKERRALESGQAILA 125
Query: 137 SMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCVSIPSSIA 195
S+ S +G+ G V G+M QSI S ++ ++ G I +L++ +G+ V++P+ +
Sbjct: 126 SIGSTAPFIGLFGTVWGIMEALQSIGVTGSASLEAVAGPIGHALVATGVGIAVAVPAVLI 185
Query: 196 YNKFIEDSKKFAMQMEGFANEFSAILSR 223
YN F+ K M+ FA++F A+ R
Sbjct: 186 YNFFLRRLKLAVADMDDFAHDFDALAQR 213
>gi|269958989|ref|YP_003328778.1| TolQ protein [Anaplasma centrale str. Israel]
gi|269848820|gb|ACZ49464.1| TolQ protein [Anaplasma centrale str. Israel]
Length = 228
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 112/213 (52%), Gaps = 16/213 (7%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQL---FWSGQ 67
+S+ F + VK I+ +L FSI+SWSVI++K +TLR+Q RE ++L F S +
Sbjct: 22 LSMLGAFSNADIVVKAIMLILVAFSIISWSVILKK---HLTLRKQAREIKELEGRFSSRR 78
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + + + + I ++ I + K +K Q + R + ++R L++
Sbjct: 79 TFTNLSEIVGSSTGI-VSQILNYGIQNSKLVTNK--------QAGLHRFVSAELSRTLDK 129
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ + + L ++ S+ +G+LG V G++G +SI S + S+ PG+ E+L + LGL
Sbjct: 130 LEDNVEILATIGSSSPFIGLLGTVWGVVGSLRSIPTGVSVGIASVGPGVAEALFATALGL 189
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
V+IP++I YN+F + + ++ E A
Sbjct: 190 LVAIPANIFYNRFTALITRMSNRLSNLVYELEA 222
>gi|218887452|ref|YP_002436773.1| protein TolQ [Desulfovibrio vulgaris str. 'Miyazaki F']
gi|218758406|gb|ACL09305.1| protein TolQ [Desulfovibrio vulgaris str. 'Miyazaki F']
Length = 231
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 103/208 (49%), Gaps = 2/208 (0%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+ I ++ Q L K I+ LL + SI SW+++ QK +R+ + F + L
Sbjct: 1 MDILSILAQATLVAKFILVLLVLMSIGSWTLMFQKWFALKAAQRKAADGLDRFQKARDLR 60
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
+SL L + ++E+ + + G+ + + D + R + + E+ ++
Sbjct: 61 EAVQSLGGDAASPLYHVAQQGVAEFNRLKEAGSSGDV-VADNVRRSLRQGVGNEMTRLSA 119
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCVS 189
LSFL + ++ +G+ G V G+M F +I S ++ ++ PGI E+LI+ +GL V+
Sbjct: 120 SLSFLATAANTAPFIGLFGTVWGIMYSFHAIGQMKSASLATVAPGISEALIATAIGLFVA 179
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFANEF 217
IP+++ YN F+ +Q+ FA F
Sbjct: 180 IPATVGYNIFLGMISSIEVQLVNFAGAF 207
>gi|197119872|ref|YP_002140299.1| TolQ-like biopolymer transport membrane proton channel [Geobacter
bemidjiensis Bem]
gi|197089232|gb|ACH40503.1| TolQ-related biopolymer transport membrane proton channel
[Geobacter bemidjiensis Bem]
Length = 224
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 100/222 (45%), Gaps = 9/222 (4%)
Query: 16 LFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKS 75
+F GL VK ++ LL FS++SW +I K + F FW + + +
Sbjct: 3 MFASTGLVVKLVLFLLLYFSVVSWGIIFYKLLQVSRANGASERFLDFFWKAKRFDAISGQ 62
Query: 76 LKNHHNIGLAAIFMSAMSEWKKSCDK--------GARSPIGIQDRIDRMMDVAIARELEE 127
L N L +F E KK +K + +G D I R + A E+
Sbjct: 63 LDRFANSPLTVLFQEGYGELKKLQEKIEEKADPTSISTDLGGIDNIARALRRATTSEITR 122
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
+ + L+FL + + +G+ G V G+M F+ I S ++ V PGI E+LI+ +GL
Sbjct: 123 LEKYLTFLATTGATAPFIGLFGTVWGIMTAFEKIGQTGSASLAVVAPGIAEALIATAIGL 182
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
+IP+ + YN F K +M+ F+ EF I+ R G
Sbjct: 183 VAAIPAVMGYNHFQHKIKVLISEMDSFSTEFLNIVQRNFAGR 224
>gi|296448897|ref|ZP_06890718.1| MotA/TolQ/ExbB proton channel [Methylosinus trichosporium OB3b]
gi|296253595|gb|EFH00801.1| MotA/TolQ/ExbB proton channel [Methylosinus trichosporium OB3b]
Length = 245
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 106/227 (46%), Gaps = 32/227 (14%)
Query: 16 LFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKS 75
LF+Q VK +I LL + S W+VI +K + L R+ + + +++V K
Sbjct: 20 LFLQADSIVKTVIVLLILASAWGWTVIAEKLIRLGVLHRR---------AARLIDSVQKE 70
Query: 76 LKNHHNIGLAAIFMSAMSE------WKKSCDKGARSPI---------GIQDRIDRMMDVA 120
L L A F +A E ++ D+ ARS +Q+R+ R+ +A
Sbjct: 71 LPV---ADLPASFDAASPEDPLVQVYRAMVDENARSSDLQHSETQRDALQERVHRVGQLA 127
Query: 121 IARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV---VSIPGIIE 177
A ++ + +L L ++ + VG+ G V G+M FQ IA SNN V PGI E
Sbjct: 128 AANAIDHLHARLQGLATIGAVAPFVGLFGTVWGIMNSFQGIAA--SNNTSLAVVAPGIAE 185
Query: 178 SLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+L + LGL +IP+ I YN+ D + ++ F F LSRQ
Sbjct: 186 ALFATALGLVAAIPAVIFYNRISGDIGAYGKRLNSFIGVFEVELSRQ 232
>gi|189426519|ref|YP_001953696.1| protein TolQ [Geobacter lovleyi SZ]
gi|189422778|gb|ACD97176.1| protein TolQ [Geobacter lovleyi SZ]
Length = 227
Score = 86.3 bits (212), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 107/225 (47%), Gaps = 15/225 (6%)
Query: 16 LFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFRE---FEQLFWSGQSLETV 72
F GL VK ++ LL +FS++SW++I+ K F + + F E F FW + +++
Sbjct: 6 FFTSTGLVVKAVLLLLIMFSVVSWAIIMFK---FFQIHKAFSESGRFMDFFWKTKRFDSI 62
Query: 73 CKSLKNHHNIGLAAIFMSAMSEWK--------KSCDKGARSPIGIQDRIDRMMDVAIARE 124
+ + L A+F SE K K G + +G + R + A E
Sbjct: 63 SSQVDRFASSPLTALFNEGYSELKQLMEAEGVKPDHGGVSTDLGGVANVSRALRRATNLE 122
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISIL 183
+ + + +FL + S +G+ G V G+M F+ I S ++ V PGI E+LI+
Sbjct: 123 VNRLEKYTTFLATTGSTSPFIGLFGTVWGIMVAFEGIGKTGSASLAVVAPGIAEALIATA 182
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
+GL +IP+ +AYN F + +M+ F+ EF I+ R G
Sbjct: 183 VGLVAAIPAVMAYNHFQHKIRVLVKEMDSFSTEFLNIVQRNIAGK 227
>gi|254994809|ref|ZP_05276999.1| TOLQ protein (tolQ) [Anaplasma marginale str. Mississippi]
gi|255002937|ref|ZP_05277901.1| TOLQ protein (tolQ) [Anaplasma marginale str. Puerto Rico]
gi|255004062|ref|ZP_05278863.1| TOLQ protein (tolQ) [Anaplasma marginale str. Virginia]
Length = 221
Score = 86.3 bits (212), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 107/211 (50%), Gaps = 12/211 (5%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+S+ F + VK + +L FS++SWSVI++K + R+ RE E+ F S ++
Sbjct: 15 LSMLGAFSNADIVVKATMLILVAFSVISWSVILKKHLVLRKRAREIRELEERFSSRRTFT 74
Query: 71 TVCKSLKNHHNIGLAA-IFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+ + + H+ G+ + I M K +K Q + R + ++R L+++
Sbjct: 75 NLTEIIG--HSTGIVSQILNYGMQNSKLVTNK--------QAGLHRFVSAELSRTLDKLE 124
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCV 188
+ + L ++ S+ +G+ G V G++G +SI S + S+ PG+ E+L + LGL V
Sbjct: 125 DNVELLATIGSSSPFIGLFGTVWGVVGSLRSIPAGASVGIASVGPGMAEALFATALGLLV 184
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
+IP++I YN+F + + ++ E A
Sbjct: 185 AIPANIFYNRFTALITRMSNRLSNLVCELEA 215
>gi|167036213|ref|YP_001671444.1| MotA/TolQ/ExbB proton channel [Pseudomonas putida GB-1]
gi|166862701|gb|ABZ01109.1| MotA/TolQ/ExbB proton channel [Pseudomonas putida GB-1]
Length = 239
Score = 86.3 bits (212), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 99/196 (50%), Gaps = 6/196 (3%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLA 85
+I LL FS+++W + + K F+ L+ Q + F Q FW+ SL++ + +H G A
Sbjct: 14 AVIWLLVGFSVVTWGLALVKVAQFVRLKNQDKRFHQQFWAASSLDSAAE--LSHELPGPA 71
Query: 86 AIFMSAMSEWKKSCDKGARS---PIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAG 142
A + D A I QDR++R + I RE + L+ + S+ S
Sbjct: 72 ARVAQSGYAAIAVGDTQANDLSHAINHQDRLERALRQQIVRERRSLETGLAVVASIGSTS 131
Query: 143 LLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCVSIPSSIAYNKFIE 201
+G+ G V G+M + I+ S ++ ++ G I +L++ +G+ V++P+ + YN F+
Sbjct: 132 PFIGLFGTVWGIMEALKGISAAGSASLETVAGPIGAALVATGVGIAVAVPAVLVYNYFLR 191
Query: 202 DSKKFAMQMEGFANEF 217
K A ++ FA++F
Sbjct: 192 RLKLTAADLDDFAHDF 207
>gi|225163848|ref|ZP_03726143.1| MotA/TolQ/ExbB proton channel [Opitutaceae bacterium TAV2]
gi|224801529|gb|EEG19830.1| MotA/TolQ/ExbB proton channel [Opitutaceae bacterium TAV2]
Length = 228
Score = 86.3 bits (212), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 112/221 (50%), Gaps = 5/221 (2%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
++IF +F L + I L + S+++W+V+ K +R FEQ ++
Sbjct: 8 VNIFNVFSTTDLVGQIITVSLALSSLVTWTVMFGKYFELKRIRELNLAFEQRLRDERATL 67
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKS----CDKGARSPIGIQDRIDRMMDVAIARELE 126
+ +H +I +F A+ ++++ ++GA S + + + AIAR++
Sbjct: 68 DSATAYLHHRHIPYGDVFADAIDAYRRAGEIISERGADSVRTRLEHSENAIQRAIARQVL 127
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLG 185
+ FL ++ + +G+LG V G+M F ++AG + + ++ PG+ +L++ + G
Sbjct: 128 RYESSMIFLATVVTGAPFMGLLGTVWGVMEAFTAVAGQQTATIQTLAPGVSAALLTTVAG 187
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
LCV+IPS + YN + +K+ ++E F++ + + +T+
Sbjct: 188 LCVAIPSLLGYNFLLGKTKQLTTEIENFSSSLADRIELETQ 228
>gi|241761366|ref|ZP_04759454.1| MotA/TolQ/ExbB proton channel [Zymomonas mobilis subsp. mobilis
ATCC 10988]
gi|260753281|ref|YP_003226174.1| MotA/TolQ/ExbB proton channel [Zymomonas mobilis subsp. mobilis
NCIMB 11163]
gi|283856201|ref|YP_161896.2| MotA/TolQ/ExbB proton channel protein [Zymomonas mobilis subsp.
mobilis ZM4]
gi|241374273|gb|EER63770.1| MotA/TolQ/ExbB proton channel [Zymomonas mobilis subsp. mobilis
ATCC 10988]
gi|258552644|gb|ACV75590.1| MotA/TolQ/ExbB proton channel [Zymomonas mobilis subsp. mobilis
NCIMB 11163]
gi|283775197|gb|AAV88785.2| MotA/TolQ/ExbB proton channel [Zymomonas mobilis subsp. mobilis
ZM4]
Length = 236
Score = 86.3 bits (212), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 112/228 (49%), Gaps = 7/228 (3%)
Query: 3 NYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQL 62
N LA +S LF+ + + ++ LL SI SW++I + R R FE+
Sbjct: 9 NADLASSVLSPVTLFLHADMVGRLVMILLLCASIGSWALIFGQFFRSSAANRASRNFEKA 68
Query: 63 FWSGQSLETVCKSLKNH--HNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVA 120
+ +S+ + + + N A IF++ M + KS K G +DR+ ++ A
Sbjct: 69 YSKAESMGELERFYDRYFGSNDPSARIFLAGM-QTAKSAGKVIDHE-GERDRLSLSLEDA 126
Query: 121 IARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI--PGIIES 178
+A +E+++ LS L ++ S VG+ G V G+M F IA N ++I PGI E+
Sbjct: 127 VAAAVEDMSSPLSSLATIGSVSPFVGLFGTVWGIMHSFSQIAAG-GNTAMAIVGPGIAEA 185
Query: 179 LISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
L S LGL +IP+SIAYN+ +F ++ F++ LSR +
Sbjct: 186 LFSTALGLFAAIPASIAYNRMSHTIGRFESRLTRFSDRIYITLSRAMD 233
>gi|253702169|ref|YP_003023358.1| protein TolQ [Geobacter sp. M21]
gi|251777019|gb|ACT19600.1| protein TolQ [Geobacter sp. M21]
Length = 224
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 100/222 (45%), Gaps = 9/222 (4%)
Query: 16 LFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKS 75
+F GL VK ++ LL FS++SW +I K + F FW + + +
Sbjct: 3 MFASTGLVVKLVLFLLLYFSVVSWGIIFYKLLQVSRANGASERFLDFFWKAKRFDAINGQ 62
Query: 76 LKNHHNIGLAAIFMSAMSEWKKSCDK--------GARSPIGIQDRIDRMMDVAIARELEE 127
L N L +F E KK +K + +G D I R + A E+
Sbjct: 63 LDRFTNSPLTVLFQEGYGELKKLQEKVEEKADPTSISTDLGGIDNIARALRRATTSEITR 122
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
+ + L+FL + + +G+ G V G+M F+ I S ++ V PGI E+LI+ +GL
Sbjct: 123 LEKYLTFLATTGATAPFIGLFGTVWGIMTAFEKIGQTGSASLAVVAPGIAEALIATAIGL 182
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
+IP+ + YN F K +M+ F+ EF I+ R G
Sbjct: 183 VAAIPAVMGYNHFQHKIKVLISEMDSFSTEFLNIVQRNFAGR 224
>gi|170719483|ref|YP_001747171.1| MotA/TolQ/ExbB proton channel [Pseudomonas putida W619]
gi|169757486|gb|ACA70802.1| MotA/TolQ/ExbB proton channel [Pseudomonas putida W619]
Length = 239
Score = 85.9 bits (211), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 102/198 (51%), Gaps = 10/198 (5%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLA 85
+I LL FS+++W + + K V F+ L+ Q + F FW+ SL+ + +H G A
Sbjct: 14 AVIWLLVGFSVVTWGLALAKIVQFVRLKNQDKRFHTQFWAASSLDAAAQV--SHELPGPA 71
Query: 86 AIFMSAMSEWKKSCDKGARS-----PIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSS 140
A A S + A++ I QDR++R + I RE + L+ + S+ S
Sbjct: 72 A--RVAQSGYAAIAVGEAQTNDLSHAINHQDRLERALHQQIVRERRSLETGLAVVASIGS 129
Query: 141 AGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCVSIPSSIAYNKF 199
+G+ G V G+M + I+ S ++ ++ G I +L++ +G+ V++P+ + YN F
Sbjct: 130 TSPFIGLFGTVWGIMEALKGISAAGSASLETVAGPIGAALVATGVGIAVAVPAVLVYNYF 189
Query: 200 IEDSKKFAMQMEGFANEF 217
+ K A +++ FA++F
Sbjct: 190 LRRLKLTAAELDDFAHDF 207
>gi|114326703|ref|YP_743860.1| tolQ protein [Granulibacter bethesdensis CGDNIH1]
gi|114314877|gb|ABI60937.1| tolQ protein [Granulibacter bethesdensis CGDNIH1]
Length = 316
Score = 85.9 bits (211), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 110/228 (48%), Gaps = 17/228 (7%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S+ A+F L VK ++ L SIL+W++++ K + RR R + +SL
Sbjct: 93 DLSVQAMFHNADLVVKAVMLGLVAASILTWTILLAKGIEIAGARRSLRRDLSEAMAERSL 152
Query: 70 ETVCKSLKNHHNIGLA---AIFMSAMSEWKKSCDKGARSPIGIQDRID---RMMDVAIAR 123
T+ H G++ A+ +A E S D+ GIQ+R+ R ++ A R
Sbjct: 153 ATLQA---RQHGRGMSPGVAMVNAAAEEIIASGDRTG----GIQERVVSRLRRLEAAYGR 205
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISI 182
+ T L+ +G+ S +G+ G V G+M F I+ ++ N+ V PGI E+L++
Sbjct: 206 RIGRGTGFLATIGATSP---FIGLFGTVWGIMNSFIGISQSHTTNLAVVAPGIAEALLAT 262
Query: 183 LLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
GL +IP+ + YN F + + Q+ + I+SR +G S
Sbjct: 263 ATGLVAAIPAVVIYNSFARITGGYRAQLTDLTAAVTRIVSRDLDGQRS 310
>gi|56416595|ref|YP_153669.1| TolQ protein [Anaplasma marginale str. St. Maries]
gi|222474962|ref|YP_002563377.1| TOLQ protein (tolQ) [Anaplasma marginale str. Florida]
gi|56387827|gb|AAV86414.1| TolQ protein [Anaplasma marginale str. St. Maries]
gi|222419098|gb|ACM49121.1| TOLQ protein (tolQ) [Anaplasma marginale str. Florida]
Length = 230
Score = 85.9 bits (211), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 107/211 (50%), Gaps = 12/211 (5%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+S+ F + VK + +L FS++SWSVI++K + R+ RE E+ F S ++
Sbjct: 24 LSMLGAFSNADIVVKATMLILVAFSVISWSVILKKHLVLRKRAREIRELEERFSSRRTFT 83
Query: 71 TVCKSLKNHHNIGLAA-IFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+ + + H+ G+ + I M K +K Q + R + ++R L+++
Sbjct: 84 NLTEIIG--HSTGIVSQILNYGMQNSKLVTNK--------QAGLHRFVSAELSRTLDKLE 133
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCV 188
+ + L ++ S+ +G+ G V G++G +SI S + S+ PG+ E+L + LGL V
Sbjct: 134 DNVELLATIGSSSPFIGLFGTVWGVVGSLRSIPAGASVGIASVGPGMAEALFATALGLLV 193
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
+IP++I YN+F + + ++ E A
Sbjct: 194 AIPANIFYNRFTALITRMSNRLSNLVCELEA 224
>gi|46581502|ref|YP_012310.1| tolQ protein [Desulfovibrio vulgaris str. Hildenborough]
gi|120601332|ref|YP_965732.1| MotA/TolQ/ExbB proton channel [Desulfovibrio vulgaris DP4]
gi|46450924|gb|AAS97570.1| tolQ protein [Desulfovibrio vulgaris str. Hildenborough]
gi|120561561|gb|ABM27305.1| Cell division and transport-associated protein TolQ [Desulfovibrio
vulgaris DP4]
gi|311235151|gb|ADP88005.1| protein TolQ [Desulfovibrio vulgaris RCH1]
Length = 230
Score = 85.9 bits (211), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 108/217 (49%), Gaps = 2/217 (0%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
M+ + F + Q L K ++ LL + SI SWS++ QK RR+ + + F +
Sbjct: 1 MENNFFQIIGQATLVAKFVLALLVLMSIGSWSLMFQKLFALRAARRKAEDGLERFLRARD 60
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
L +SL L + ++E+ + + G + + D + R + +A E+ +
Sbjct: 61 LREAVQSLGGDATSPLYHVAQQGVAEFNRLKEMGNSGEV-VADNVRRALRQGVANEMSSL 119
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLC 187
+ LSFL + ++ +G+ G V G+M F +I S ++ ++ PGI E+LI+ +GL
Sbjct: 120 SSSLSFLATAANTAPFIGLFGTVWGIMHSFHAIGMMKSASLATVAPGISEALIATAIGLA 179
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
V+IP+++ YN F+ +Q+ FA F + R+
Sbjct: 180 VAIPATVGYNVFLGMLAGIEVQVVNFAGVFLNRVQRE 216
>gi|254447611|ref|ZP_05061077.1| MotA/TolQ/ExbB proton channel [gamma proteobacterium HTCC5015]
gi|198262954|gb|EDY87233.1| MotA/TolQ/ExbB proton channel [gamma proteobacterium HTCC5015]
Length = 305
Score = 85.9 bits (211), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 112/221 (50%), Gaps = 9/221 (4%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S ++ Q VK ++ L S+++W+V K++ +T++R +E Q +SL
Sbjct: 71 DLSPMGMYRQADWVVKAVMLGLLFASVVTWTVWAVKALQLMTVKRHAKEAVQHLQQAKSL 130
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRI-DRMMDVA--IARELE 126
+ +L++ + + +A E S D+ A S G+++R R+ D+ R+L
Sbjct: 131 KEALLALQSSKG-AIPMLAKAAQHELHLSSDR-AMSKDGVKERTFSRLQDIEAITGRQLN 188
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLG 185
+ T L+ +GS + VG+ G V G+M F IA + N+ V PGI E+L++ +G
Sbjct: 189 QGTGLLATIGSTAP---FVGLFGTVWGIMNSFIGIAAANTTNLAVVAPGIAEALLATAIG 245
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
L +IP+ I YN F F Q+ ++E ++SR +
Sbjct: 246 LLAAIPAVIIYNHFARGMGAFRGQLGNASSEVLRLVSRDLD 286
>gi|317051747|ref|YP_004112863.1| MotA/TolQ/ExbB proton channel [Desulfurispirillum indicum S5]
gi|316946831|gb|ADU66307.1| MotA/TolQ/ExbB proton channel [Desulfurispirillum indicum S5]
Length = 215
Score = 85.5 bits (210), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 107/218 (49%), Gaps = 6/218 (2%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
M+ SI +F K I+ L SI+SW VIIQK + + + F +FWS QS
Sbjct: 1 MEFSIANVFSHADFFGKFIMIFLLGMSIVSWGVIIQKFLYLRNVSQMNDRFLDIFWSNQS 60
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKK-SCDKGARSPIGIQDRIDRMMDVAIARELEE 127
L V S + L +F ++ + + + +RI R +A R++E
Sbjct: 61 LSKVTSS-AGSMSAPLLDVFRVTHKNFQALPQETASDEKVAYVERIVRAESMAKVRDMES 119
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
LS L ++S+ +G+LG V G++ F +I S ++ V PG+ E+L++ LGL
Sbjct: 120 ---SLSTLAIIASSAPYIGLLGTVWGIIRSFHTIGAMRSASLAVVAPGLSEALVATALGL 176
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+IP+ + YN F K+ ME FA+E AIL R+
Sbjct: 177 FAAIPAVMFYNVFAARIKQQVSIMESFADELMAILMRK 214
>gi|94967626|ref|YP_589674.1| MotA/TolQ/ExbB proton channel [Candidatus Koribacter versatilis
Ellin345]
gi|94549676|gb|ABF39600.1| Cell division and transport-associated protein TolQ [Candidatus
Koribacter versatilis Ellin345]
Length = 235
Score = 85.5 bits (210), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 104/211 (49%), Gaps = 9/211 (4%)
Query: 15 ALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCK 74
+LF GL + ++ +L +FS+ SWS+++ K F + Q F + F Q ++ V
Sbjct: 16 SLFSNTGLVARAVLLILMLFSLFSWSIVVAKWSLFRRAKVQSGRFVRAFRKAQRMQDVAA 75
Query: 75 SLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSF 134
+ L ++F A E ++ +G R + I R +A + EL + +L +
Sbjct: 76 VAEQFKPSPLVSVFEGAYEELRR---QGPRLNV---TSIQRSTQIAASEELTRLERRLPW 129
Query: 135 LGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGLCVSIPS 192
L + + +G+ G V G++ F + AG + V+ PGI E+LI+ GL ++P+
Sbjct: 130 LATTGAVTPFIGLFGTVWGIIDAFHGLGDAGAATLRAVA-PGISEALITTAAGLFAAVPA 188
Query: 193 SIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
I YN ++ + ++F +M+ F+ E + R
Sbjct: 189 VIFYNMYMNNIREFGARMDDFSLELLNTVER 219
>gi|242279947|ref|YP_002992076.1| MotA/TolQ/ExbB proton channel [Desulfovibrio salexigens DSM 2638]
gi|242122841|gb|ACS80537.1| MotA/TolQ/ExbB proton channel [Desulfovibrio salexigens DSM 2638]
Length = 239
Score = 85.5 bits (210), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 106/216 (49%), Gaps = 4/216 (1%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
IFA+ Q + VKC++ LL S+ SW++I K ++ R + ++ SL +
Sbjct: 9 IFAMLDQATIVVKCVLGLLAAMSLWSWTIIFWKLISLGRARTLILKGNKIMEEADSLSSG 68
Query: 73 CKSLKNHHNIGLAAIFMSAMSEWK---KSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+ L I +A+ E++ KS + I+D + R++ ++ EL+++T
Sbjct: 69 LTEISKTEGSPLNRIGTAAVKEYRVLEKSAVSASHKRRLIKDTLRRILRRKVSSELKKLT 128
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAG-YYSNNVVSIPGIIESLISILLGLCV 188
LSFL + ++ +G+ G V G+M F +I + PGI E+L++ +GL V
Sbjct: 129 SSLSFLATCANGAPFIGLFGTVWGIMNSFHAIGSAKSAALAAVAPGISEALVATAIGLGV 188
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+IP++I YN F+ ++ FA F + R+
Sbjct: 189 AIPATIFYNFFLGVLNGIETELVNFAGTFLNRVERE 224
>gi|146309076|ref|YP_001189541.1| MotA/TolQ/ExbB proton channel [Pseudomonas mendocina ymp]
gi|145577277|gb|ABP86809.1| Cell division and transport-associated protein TolQ [Pseudomonas
mendocina ymp]
Length = 236
Score = 85.1 bits (209), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 108/218 (49%), Gaps = 3/218 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
++++ L + L V+ ++ L + S++SW +I+Q+S R+ + F Q F L
Sbjct: 7 QMTVWGLVSEASLLVQAVMLSLVLASLVSWYLIVQRSAVLRRSEREAKAFLQRFRGSAEL 66
Query: 70 ETVCK--SLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + + + + G+ +F + E+ + + + + + ++R + VAIA + E
Sbjct: 67 AQLQRECAAEADQDAGVQQLFQAGYGEYLQLQREPGIAADAVIEGVERSLLVAIAEQEER 126
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ + L L ++ S VG+ G V G+M F ++ + ++ PGI E+LI+ +GL
Sbjct: 127 LEKGLPLLATVGSVSPYVGLFGTVWGIMNSFIGLSQVQQATLSTVAPGIAEALIATAIGL 186
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+IP+ IAYN+F + FANE L R+
Sbjct: 187 FAAIPAVIAYNRFSARVAGLGARYYSFANELQGRLQRR 224
>gi|148254956|ref|YP_001239541.1| biopolymer transport protein ExbB [Bradyrhizobium sp. BTAi1]
gi|146407129|gb|ABQ35635.1| outer membrane transport energization protein ExbB [Bradyrhizobium
sp. BTAi1]
Length = 313
Score = 85.1 bits (209), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 102/198 (51%), Gaps = 4/198 (2%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
++S + +F++ + VK ++ L + S+ SW+++I KS+ F LRR+ + + +SL
Sbjct: 80 ELSPWGMFLKADIVVKAVMIALALASVASWTILIAKSIEFSILRRKLGGALRKLTAAKSL 139
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+L N N+ A + +A++E + S G S GI++R + E +
Sbjct: 140 AEAQLALGNGRNVA-AVLLQAALTEARLSAGLG--SDEGIKERAASSFAEIVRAEGRRVR 196
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCV 188
+ L ++ + VG+ G V G+M F I+ + N+ V PGI E+L++ +GL
Sbjct: 197 TGMGLLATVGAISPFVGLFGTVWGIMNSFIGISKSQTTNLAVVAPGIAEALLATAIGLAA 256
Query: 189 SIPSSIAYNKFIEDSKKF 206
+IP+ I YN F +K +
Sbjct: 257 AIPAVIIYNHFSRVTKGY 274
>gi|317493081|ref|ZP_07951505.1| tonB-system energizer ExbB [Enterobacteriaceae bacterium 9_2_54FAA]
gi|316919203|gb|EFV40538.1| tonB-system energizer ExbB [Enterobacteriaceae bacterium 9_2_54FAA]
Length = 302
Score = 85.1 bits (209), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 100/192 (52%), Gaps = 2/192 (1%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
+D+SIF ++ Q + VK ++ L + S+++W+++ K + + +R+ ++ +L + S
Sbjct: 76 LDLSIFGMYQQADIVVKSVMIGLLVISVITWTILFAKGIALLRAKRKLQQEYRLLFPSLS 135
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
T C+ ++ ++A ++ + +K GI+DR + +D +A +
Sbjct: 136 FTTACELSQSFEKDSISAALLNDAQD-EKQLSAQMLDLNGIKDRANFRLDRRVAAYGRSL 194
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
+ +L ++ + +G+ G V G+M F IA + N+ V PGI E+L++ +GL
Sbjct: 195 AKGNGYLATIGAVAPFIGLFGTVWGIMNSFIGIAHSQTTNLAVVAPGIAEALLATAMGLI 254
Query: 188 VSIPSSIAYNKF 199
+IP+ + YN F
Sbjct: 255 AAIPAVVIYNLF 266
>gi|153003578|ref|YP_001377903.1| Tol-Pal system TolQ [Anaeromyxobacter sp. Fw109-5]
gi|152027151|gb|ABS24919.1| Tol-Pal system TolQ [Anaeromyxobacter sp. Fw109-5]
Length = 245
Score = 84.7 bits (208), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 107/199 (53%), Gaps = 10/199 (5%)
Query: 35 SILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIF------ 88
S +SW++I++K + + + +F + FW + L+ + ++ ++ ++ +F
Sbjct: 45 SAVSWAIIVKKWLQIRRAQDESVKFLETFWQSKRLDAIYQAAESLSASPISQVFRAGYVE 104
Query: 89 MSAMSEWKKSCDKGARSP-IGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGI 147
+S ++ KK +G+ S +G + ++R + A A E+ + ++ FLG+ +SA VG+
Sbjct: 105 LSKVTAQKKEGGEGSMSDELGGIENVERALKRAAASEVTHLEAQVPFLGTTASAAPFVGL 164
Query: 148 LGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKK 205
G V G+M F I AG + V+ P I E+LI+ +GL +IP+ +AYN F+ +
Sbjct: 165 FGTVWGIMRAFHDIYQAGNANLATVAKP-ISEALIATAVGLFAAIPAVVAYNYFVSKIRV 223
Query: 206 FAMQMEGFANEFSAILSRQ 224
+M F+N+F I+ R
Sbjct: 224 LDSEMTNFSNDFLNIVRRH 242
>gi|262368711|ref|ZP_06062040.1| TolQ protein [Acinetobacter johnsonii SH046]
gi|262316389|gb|EEY97427.1| TolQ protein [Acinetobacter johnsonii SH046]
Length = 236
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 113/220 (51%), Gaps = 3/220 (1%)
Query: 7 AIMD-ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS 65
A MD +S++ L + VK ++ +L + S++SW +I++ + + + F + F
Sbjct: 7 ATMDQMSVWMLISHASVLVKVVMLILVLSSVVSWYLIVRHGMLLRGQEQLWNRFLKNFRQ 66
Query: 66 GQSLETVCKSLKNHHNI-GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARE 124
+ L + + + G+ +IF + E+ + + + D ++R + +I+ E
Sbjct: 67 QKDLNLLQQDYQQPEQQKGVVSIFQHGIDEYHQLIKDEQLTTSDVIDGVERRLLSSISEE 126
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISIL 183
E++ + L+FL ++ S +G+ G V G+M F ++ + ++ PGI E+LI+
Sbjct: 127 EEKLQQNLTFLATVGSVSPYIGLFGTVWGIMNAFIGLSAVEQATLNTVAPGIAEALIATA 186
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
+GL +IP+ +AYN+F + K + + GFANE + R
Sbjct: 187 IGLFAAIPAVVAYNRFSARADKLSSRYYGFANELQTRIYR 226
>gi|154174874|ref|YP_001407645.1| biopolymer transport ExbB protein [Campylobacter curvus 525.92]
gi|112802306|gb|EAT99650.1| biopolymer transport ExbB protein [Campylobacter curvus 525.92]
Length = 251
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 106/222 (47%), Gaps = 12/222 (5%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
+++S ++L+ + VKC+I +L FS+L+WSV I K + + R + E + +
Sbjct: 32 VELSFYSLYSNADMVVKCVIYILVFFSVLTWSVFICKFIEYFLAFRTLKGDENSVRNLSN 91
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
L + K K A + ++ +C A +Q+RI +++ I + L +
Sbjct: 92 LNDLSKFKKQ----SFAKRLIKEINLETSAC---ASYNANVQNRIKERLEIEILKILSSL 144
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV---VSIPGIIESLISILLG 185
+ L S+ S+ +G+ G V G+M F IA +NN + PGI E+L + G
Sbjct: 145 KSYVWLLASIGSSSPFIGLFGTVWGIMNSFIGIAN--ANNASLNIVAPGIAEALFATAFG 202
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEG 227
L +IP+ + YN FI+ + KF+ ++ A + R E
Sbjct: 203 LMAAIPAVLFYNYFIQKNAKFSNKLNELATTIYILSDRLNEA 244
>gi|148244815|ref|YP_001219509.1| biopolymer transport protein TolQ [Candidatus Vesicomyosocius
okutanii HA]
gi|146326642|dbj|BAF61785.1| biopolymer transport protein TolQ [Candidatus Vesicomyosocius
okutanii HA]
Length = 230
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 105/217 (48%), Gaps = 3/217 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+SIF+L + G V+ ++ +L + SI SW++I+ K I + + F Q F + LE
Sbjct: 5 LSIFSLILSAGFVVQVVMFILVLMSIYSWTLILSKKKILIDTNKSIKFFYQKFSTNVDLE 64
Query: 71 TVCKSL--KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ ++ + + IF + E + ++ I +R R+M++ E++ +
Sbjct: 65 KLAYQTFQESTNQSSMERIFNAGYQELNYTTSDSSQELIINAERAYRIMNITANNEVDYL 124
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLC 187
+ LS L ++S+ +G+ G V G+M F +A + + PGI E+LI+ GL
Sbjct: 125 DDGLSILAMIASSSPYIGLFGTVWGIMHSFIGLASVKQATIAIVAPGIAEALIATAFGLF 184
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+IP++IAYN+ I + F + + RQ
Sbjct: 185 SAIPATIAYNRLITKVGMINNKYSVFVEQLFVLFQRQ 221
>gi|95929962|ref|ZP_01312702.1| MotA/TolQ/ExbB proton channel [Desulfuromonas acetoxidans DSM 684]
gi|95133931|gb|EAT15590.1| MotA/TolQ/ExbB proton channel [Desulfuromonas acetoxidans DSM 684]
Length = 222
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 97/199 (48%), Gaps = 14/199 (7%)
Query: 38 SWSVIIQKSVNFITLRRQFREFEQ---LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSE 94
SW++I K F T++R RE Q FW+ + L+ V + +K + + L+++F E
Sbjct: 26 SWTIIFYK---FRTIQRATRESSQFIDFFWNKKRLDAVAQEIKQYSHSPLSSLFREGYQE 82
Query: 95 WKK--SCDKGARSPIGIQD----RIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGIL 148
K +KG S G D I R + A +E + + L+FL + S +G+
Sbjct: 83 LLKVQRIEKGDDSR-GFADMGGENIARALRRASTQETHRLEKYLTFLATTGSTAPFIGLF 141
Query: 149 GAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFA 207
G V G+M F I S ++ V PGI E+L++ +GL +IP+ + YN F+
Sbjct: 142 GTVWGIMDSFHGIGQTGSASLAVVAPGISEALVATAIGLMAAIPAVVGYNHFLNKVNVLI 201
Query: 208 MQMEGFANEFSAILSRQTE 226
+M+ F+ EF I+ T
Sbjct: 202 GEMDNFSQEFLNIIEHMTR 220
>gi|217979261|ref|YP_002363408.1| MotA/TolQ/ExbB proton channel [Methylocella silvestris BL2]
gi|217504637|gb|ACK52046.1| MotA/TolQ/ExbB proton channel [Methylocella silvestris BL2]
Length = 247
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 106/222 (47%), Gaps = 12/222 (5%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+S LF Q VK ++ +L + S W+VI K + L+++ + +G +
Sbjct: 17 LSPIELFSQSDTIVKSVMIILILASAWGWAVIFDKLIRLHLLQKRADKLIASIQAGLPIA 76
Query: 71 TVCKSLKNHHNIG-LAAIFMSAMSEWKKSCD----KGARSPIGIQDRIDRMMDVAIAREL 125
+V +S + ++ + + E +S + +G R +Q+R+ R+ +A L
Sbjct: 77 SVAESFQQAAGTDPFVTVYKAMVEEHSRSAELTQSEGQRD--SLQERVHRVGQLASINAL 134
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV---VSIPGIIESLISI 182
+ + +L L ++ + VG+ G V G+M FQ IA SNN V PGI E+L +
Sbjct: 135 DHLQSRLPGLATIGAVAPFVGLFGTVWGIMTSFQGIAA--SNNTSLAVVAPGIAEALFAT 192
Query: 183 LLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
LGL +IP+ + YN+ D ++ ++ F F LSRQ
Sbjct: 193 ALGLVAAIPAVVFYNRIGADIGRYGKRLNAFIGVFEVELSRQ 234
>gi|108762516|ref|YP_633890.1| MotA/TolQ/ExbB proton channel family protein [Myxococcus xanthus DK
1622]
gi|108466396|gb|ABF91581.1| transporter, MotA/TolQ/ExbB proton channel family [Myxococcus
xanthus DK 1622]
Length = 236
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 101/199 (50%), Gaps = 10/199 (5%)
Query: 35 SILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIF------ 88
S+ SW++I K+ R Q F FW LE + ++ + L+ +F
Sbjct: 36 SVASWALIAMKASQLAKARAQSLTFLDTFWKASRLEAIYQTAQKLDGSPLSKVFCAGYEE 95
Query: 89 MSAMSEWKKSCDKGARSP-IGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGI 147
++ +++ K+ +GA + +G + ++R + A ++ E+ ++SFLG++ +A VG+
Sbjct: 96 LTKLAQAKEGGTEGALAERLGGIENVERALHRASTAQITELENRVSFLGTVGAASPFVGL 155
Query: 148 LGAVLGMMGFFQSIA--GYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKK 205
G V+G++ F IA G + V+ P + +L + GL +IP+ +AYN F+ K
Sbjct: 156 FGTVIGILSAFNQIAEQGNATLATVAAP-VGNALFATAAGLFAAIPAVVAYNSFVSRIKV 214
Query: 206 FAMQMEGFANEFSAILSRQ 224
F +M F+ +F I+ R
Sbjct: 215 FDTEMSNFSADFLNIIKRH 233
>gi|82545391|ref|YP_409338.1| biopolymer transport protein ExbB [Shigella boydii Sb227]
gi|187730205|ref|YP_001881769.1| biopolymer transport protein ExbB [Shigella boydii CDC 3083-94]
gi|81246802|gb|ABB67510.1| ExbB [Shigella boydii Sb227]
gi|187427197|gb|ACD06471.1| tonB-system energizer ExbB [Shigella boydii CDC 3083-94]
gi|320175247|gb|EFW50355.1| MotA/TolQ/ExbB proton channel family protein [Shigella dysenteriae
CDC 74-1112]
gi|320187488|gb|EFW62175.1| MotA/TolQ/ExbB proton channel family protein [Shigella flexneri CDC
796-83]
Length = 244
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 105/213 (49%), Gaps = 25/213 (11%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S++ ++ + VKC++ L + S+++W++ KSV F +R+ + +QL +SL
Sbjct: 9 DLSVWGMYQHADIVVKCVMIGLILASVVTWAIFFSKSVEFFNQKRRLKREQQLLAEARSL 68
Query: 70 ETV--------CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
KSL H +F A +E + S +G+ GI++R ++ +
Sbjct: 69 NQANDIAADFGSKSLSLH-------LFNEAQNELELS--EGSDDNEGIKERTSFRLERRV 119
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLI 180
A ++ +L ++ + VG+ G V G+M F IA + N+ V PGI E+L+
Sbjct: 120 AAVGRQMGRGNGYLATIGAISPFVGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGIAEALL 179
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGF 213
+ +GL +IP+ + YN FA Q+ GF
Sbjct: 180 ATAIGLVAAIPAVVIYN-------VFARQIGGF 205
>gi|188532604|ref|YP_001906401.1| biopolymer transport protein ExbB [Erwinia tasmaniensis Et1/99]
gi|188027646|emb|CAO95496.1| Biopolymer transport ExbB protein [Erwinia tasmaniensis Et1/99]
Length = 244
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 102/193 (52%), Gaps = 4/193 (2%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
MD+S++ ++ + VK ++ L + S+++W++ KS+ R++ + + L + +S
Sbjct: 8 MDLSVWGMYQHADIVVKAVMIGLLLASVVTWAIFFSKSIELSRARKRLKREQALLANARS 67
Query: 69 LETVCKSLKNHHNIGLAAIFMS-AMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
LE + + H+ L+++ +S A++E + S G+ GI++R ++ +A
Sbjct: 68 LENAAQVCEGFHHQSLSSLLVSEAVNELELSV--GSDDNNGIKERTAFRLERRVAAISRH 125
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
FL ++ + +G+ G V G+M F IA + N+ V PGI E+L++ +GL
Sbjct: 126 AGRGNGFLATIGAVAPFIGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGIAEALLATAIGL 185
Query: 187 CVSIPSSIAYNKF 199
+IP+ + YN F
Sbjct: 186 VAAIPAVVIYNVF 198
>gi|145868|gb|AAA23732.1| exbB peptide [Escherichia coli]
Length = 244
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 105/213 (49%), Gaps = 25/213 (11%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S++ ++ + VKC++ L + S+++W++ KSV F L+R+ + +QL +SL
Sbjct: 9 DLSVWGMYQHADIVVKCVMIGLILASVVTWAIFFSKSVEFFNLKRRLKREQQLLAEARSL 68
Query: 70 ETV--------CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
KSL H + A +E + S +G+ GI++R ++ +
Sbjct: 69 NQANDIAADFGSKSLSLH-------LLNEAQNELELS--EGSDDNEGIKERTSFRLERRV 119
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLI 180
A ++ +L ++ + VG+ G V G+M F IA + N+ V PGI E+L+
Sbjct: 120 AAVGRQMGRGNGYLATIGAISPFVGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGIAEALL 179
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGF 213
+ +GL +IP+ + YN FA Q+ GF
Sbjct: 180 ATAIGLVAAIPAVVIYN-------VFARQIGGF 205
>gi|332091439|gb|EGI96524.1| tonB-system energizer ExbB [Shigella boydii 3594-74]
Length = 239
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 105/213 (49%), Gaps = 25/213 (11%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S++ ++ + VKC++ L + S+++W++ KSV F +R+ + +QL +SL
Sbjct: 4 DLSVWGMYQHADIVVKCVMIGLILASVVTWAIFFSKSVEFFNQKRRLKREQQLLAEARSL 63
Query: 70 ETV--------CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
KSL H +F A +E + S +G+ GI++R ++ +
Sbjct: 64 NQANDIAADFGSKSLSLH-------LFNEAQNELELS--EGSDDNEGIKERTSFRLERRV 114
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLI 180
A ++ +L ++ + VG+ G V G+M F IA + N+ V PGI E+L+
Sbjct: 115 AAVGRQMGRGNGYLATIGAISPFVGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGIAEALL 174
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGF 213
+ +GL +IP+ + YN FA Q+ GF
Sbjct: 175 ATAIGLVAAIPAVVIYN-------VFARQIGGF 200
>gi|237729936|ref|ZP_04560417.1| biopolymer transporter ExbB [Citrobacter sp. 30_2]
gi|226908542|gb|EEH94460.1| biopolymer transporter ExbB [Citrobacter sp. 30_2]
Length = 244
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 110/223 (49%), Gaps = 4/223 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S++ ++ + VKC++ L + S+++W++ KS+ F T +R+ + +QL +SL
Sbjct: 9 DLSVWGMYQHADIVVKCVMIGLILASVVTWAIFFSKSLEFFTQKRRLKREQQLLAEARSL 68
Query: 70 ETVCKSLKNHHNIGLAAIFMS-AMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ + L A ++ A +E + S +G+ GI++R ++ +A +
Sbjct: 69 DQASEIAAGFDGKSLGAQLINEAQNELELS--EGSDDNEGIKERTGFRLERRVAAVGRHM 126
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
+L ++ + VG+ G V G+M F IA + N+ V PGI E+L++ +GL
Sbjct: 127 GRGNGYLATIGAISPFVGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGIAEALLATAIGLV 186
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
+IP+ + YN F + + A + + SR + N S
Sbjct: 187 AAIPAVVIYNIFARQIGSYKAMLGDVAAQVLLLQSRDLDLNAS 229
>gi|329113725|ref|ZP_08242500.1| Biopolymer transport protein ExbB [Acetobacter pomorum DM001]
gi|326696988|gb|EGE48654.1| Biopolymer transport protein ExbB [Acetobacter pomorum DM001]
Length = 249
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 110/221 (49%), Gaps = 6/221 (2%)
Query: 6 LAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS 65
LA + S + +F+ GL V+C++ LL + ++L+W++ I KSV + +R + + E
Sbjct: 4 LAPISFSPWEMFLNAGLVVRCVMVLLAVAALLTWTIFIAKSVELLRVRVKLAKAEHTLEQ 63
Query: 66 GQSLETVCKSLKNHHNIGLA-AIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARE 124
+L+ + + + G+A + M+A +E +S D S G+++RI ++ A E
Sbjct: 64 AGTLDLGEEGTRKN---GIAHTLVMAAETERTRSQDIPDDSE-GLKERIVLHLERLEAAE 119
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISIL 183
+ L ++ + +G+ G V G+M F IA + ++ V PGI E+L++
Sbjct: 120 GRRLMRGTGLLATIGATSPFIGLFGTVWGIMTSFTGIAASKATSLAVVAPGIAEALLATA 179
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
LGL +IP+ + YN + Q+ + ++SR
Sbjct: 180 LGLVAAIPAVVIYNHLARQTASCRAQVADLTSLVMRLVSRD 220
>gi|301019984|ref|ZP_07184117.1| TonB-system energizer ExbB [Escherichia coli MS 196-1]
gi|331664621|ref|ZP_08365527.1| TonB-system energizer ExbB [Escherichia coli TA143]
gi|299881990|gb|EFI90201.1| TonB-system energizer ExbB [Escherichia coli MS 196-1]
gi|331058552|gb|EGI30533.1| TonB-system energizer ExbB [Escherichia coli TA143]
Length = 244
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 105/213 (49%), Gaps = 25/213 (11%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S++ ++ + VKC++ L + S+++W++ KSV F T +R+ + +QL +SL
Sbjct: 9 DLSVWGMYQHADIVVKCVMIGLILASVVTWAIFFSKSVEFFTQKRRLKREQQLLAEARSL 68
Query: 70 ETV--------CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
KSL H + A +E + S +G+ GI++R ++ +
Sbjct: 69 NQANDIAADFGSKSLSLH-------LLNEAQNELELS--EGSDDNEGIKERTSFRLERRV 119
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLI 180
A ++ +L ++ + VG+ G V G+M F IA + N+ V PGI E+L+
Sbjct: 120 AAVGRQMGRGNGYLATIGAISPFVGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGIAEALL 179
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGF 213
+ +GL +IP+ + YN FA Q+ GF
Sbjct: 180 ATAIGLVAAIPAVVIYN-------VFARQIGGF 205
>gi|301017299|ref|ZP_07182063.1| TonB-system energizer ExbB [Escherichia coli MS 69-1]
gi|300400272|gb|EFJ83810.1| TonB-system energizer ExbB [Escherichia coli MS 69-1]
Length = 239
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 105/213 (49%), Gaps = 25/213 (11%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S++ ++ + VKC++ L + S+++W++ KSV F T +R+ + +QL +SL
Sbjct: 4 DLSVWGMYQHADIVVKCVMIGLILASVVTWAIFFSKSVEFFTQKRRLKREQQLLAEARSL 63
Query: 70 ETV--------CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
KSL H + A +E + S +G+ GI++R ++ +
Sbjct: 64 NQANDIAADFGSKSLSLH-------LLNEAQNELELS--EGSDDNEGIKERTSFRLERRV 114
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLI 180
A ++ +L ++ + VG+ G V G+M F IA + N+ V PGI E+L+
Sbjct: 115 AAVGRQMGRGNGYLATIGAISPFVGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGIAEALL 174
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGF 213
+ +GL +IP+ + YN FA Q+ GF
Sbjct: 175 ATAIGLVAAIPAVVIYN-------VFARQIGGF 200
>gi|329115466|ref|ZP_08244215.1| Biopolymer transport protein ExbB [Acetobacter pomorum DM001]
gi|326695244|gb|EGE46936.1| Biopolymer transport protein ExbB [Acetobacter pomorum DM001]
Length = 271
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 113/220 (51%), Gaps = 10/220 (4%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
+ S + +F+ G V+C++ LL + S+L+W++ I KSV F+++RR+ + E+ +
Sbjct: 34 LSFSPWEMFLNAGSVVQCVMILLALASLLTWTIFIAKSVEFLSVRRKLKTAEKTLEEAGT 93
Query: 69 LETVCKSLKNH---HNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
L +S + + H + +AA A+S + ++G + I + ++R ++ A R L
Sbjct: 94 LALGERSTRPNSIAHTLVMAAETEKAVSYDIPNDNEGLKERIVLH--LER-LEAAEGRRL 150
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILL 184
T L+ +G+ S +G+ G V G+M F IA + ++ V PGI E+L++ L
Sbjct: 151 MRGTGLLATIGATSP---FIGLFGTVWGIMTSFTGIAASKATSLAVVAPGIAEALLATAL 207
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
GL +IP+ + YN S Q+ + ++SR
Sbjct: 208 GLVAAIPAVVIYNHLARQSASCRAQVADLTSLVMRLVSRD 247
>gi|27804814|gb|AAO22858.1| adventurous gliding motility protein X [Myxococcus xanthus]
Length = 298
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 101/199 (50%), Gaps = 10/199 (5%)
Query: 35 SILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIF------ 88
S+ SW++I K+ R Q F FW LE + ++ + L+ +F
Sbjct: 98 SVASWALIAMKASQLAKARAQSLTFLDTFWKASRLEAIYQTAQKLDGSPLSKVFCAGYEE 157
Query: 89 MSAMSEWKKSCDKGARSP-IGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGI 147
++ +++ K+ +GA + +G + ++R + A ++ E+ ++SFLG++ +A VG+
Sbjct: 158 LTKLAQAKEGGTEGALAERLGGIENVERALHRASTAQITELENRVSFLGTVGAASPFVGL 217
Query: 148 LGAVLGMMGFFQSIA--GYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKK 205
G V+G++ F IA G + V+ P + +L + GL +IP+ +AYN F+ K
Sbjct: 218 FGTVIGILSAFNQIAEQGNATLATVAAP-VGNALFATAAGLFAAIPAVVAYNSFVSRIKV 276
Query: 206 FAMQMEGFANEFSAILSRQ 224
F +M F+ +F I+ R
Sbjct: 277 FDTEMSNFSADFLNIIKRH 295
>gi|70733732|ref|YP_257372.1| TonB system transport protein ExbB [Pseudomonas fluorescens Pf-5]
gi|68348031|gb|AAY95637.1| TonB system transport protein ExbB [Pseudomonas fluorescens Pf-5]
Length = 241
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 101/208 (48%), Gaps = 13/208 (6%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFW-------SGQSLETVCKSLKN 78
+I LL +FS+ +W + + K V F L+ Q R+F FW + ET +
Sbjct: 14 AVIWLLVVFSVATWGLALVKGVQFARLKSQDRKFHNQFWAASSLDSAASLSETQPGAAAR 73
Query: 79 HHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSM 138
G AAI + E + D I QDR++R + I RE + L+ + S+
Sbjct: 74 VAQAGYAAI---QVGEAPHAADLS--QAINHQDRLERALRQQIVRERRSLETGLAVVASI 128
Query: 139 SSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCVSIPSSIAYN 197
S +G+ G V G+M + I+ S ++ ++ G I +L++ +G+ V++P+ + YN
Sbjct: 129 GSTSPFIGLFGTVWGIMEALKGISAAGSASLETVAGPIGAALVATGVGIAVAVPAVLVYN 188
Query: 198 KFIEDSKKFAMQMEGFANEFSAILSRQT 225
F+ K A ++ FA++F ++ + +
Sbjct: 189 YFLRRLKLTAADLDDFAHDFYSLAQKNS 216
>gi|295676102|ref|YP_003604626.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. CCGE1002]
gi|295435945|gb|ADG15115.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. CCGE1002]
Length = 243
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 101/230 (43%), Gaps = 22/230 (9%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
M NYGLA ++ Q + I L I S++SWSVI+ K N + L+R + E
Sbjct: 1 MQNYGLA-------HVWAQGDFVTRGIALALLIMSVMSWSVIVVKGWNVVRLKRLTKNAE 53
Query: 61 QLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRID------ 114
Q FW L K L + F++ +++ D ++ + DR+D
Sbjct: 54 QAFWHSDDLADGVKKLGGGASTPHDNPFLALALSGQEAADHHHQTQPHLHDRMDVSDWIT 113
Query: 115 ----RMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
MD ++AR + L+ L S+ S VG+ G V G+ +I +++
Sbjct: 114 RCLKDTMDESVAR----MQSGLAILASIGSTAPFVGLFGTVWGIYHALLAIGASGQSSID 169
Query: 171 SIPGII-ESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
+ G + E+LI GL V+IP+ + YN +K ++ FA+ A
Sbjct: 170 QVAGPVGEALIMTAFGLFVAIPAVLGYNALTRANKAIVAKLSRFAHGLHA 219
>gi|16126575|ref|NP_421139.1| MotA/TolQ/ExbB proton channel family protein [Caulobacter
crescentus CB15]
gi|221235357|ref|YP_002517794.1| TonB accessory protein exbB [Caulobacter crescentus NA1000]
gi|13423861|gb|AAK24307.1| MotA/TolQ/ExbB proton channel family protein [Caulobacter
crescentus CB15]
gi|220964530|gb|ACL95886.1| TonB accessory protein exbB [Caulobacter crescentus NA1000]
Length = 302
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 104/218 (47%), Gaps = 7/218 (3%)
Query: 16 LFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCK- 74
+FMQ G+ VK ++ L + S+ SW +++ K F L +Q +F + F +S+ + +
Sbjct: 82 MFMQAGVVVKVVMIGLVLASVFSWVLLLTKIFEFAALNKQSDKFLEAFRGARSIADIARI 141
Query: 75 -SLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLS 133
S + +A + +A E + S G +D AI + ++LS
Sbjct: 142 SSSEEFEGNPMADMAAAASQEVELSRQAGLAVAGEHRDSTLSRATYAINAVQSSLAKRLS 201
Query: 134 ----FLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCV 188
FL S+ S G +G+ G V G+M F IA + N+ V PGI E+L++ +GL
Sbjct: 202 GGMVFLASVGSGGPFIGLFGTVYGIMTSFIGIANTNTTNLAVVAPGIAEALLATGIGLFA 261
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ I YN F + + EGF E +SRQ +
Sbjct: 262 AIPAVIFYNYFQTRISAYGTRSEGFVAELMNAISRQLD 299
>gi|312796625|ref|YP_004029547.1| TolQ protein [Burkholderia rhizoxinica HKI 454]
gi|312168400|emb|CBW75403.1| TolQ protein [Burkholderia rhizoxinica HKI 454]
Length = 244
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 98/226 (43%), Gaps = 14/226 (6%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
M NYG+A ++ Q + I L I S+LSWSVI+ K N + LRR R E
Sbjct: 1 MQNYGMA-------HVWAQGDFVTRGIAITLLIMSVLSWSVILIKGWNVLRLRRLTRNTE 53
Query: 61 QLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRID------ 114
Q FW L + + F++ K++ D +S + DR+D
Sbjct: 54 QQFWHSDDFTEGLVKLGSTGSGAADNPFVALALSGKEAADHHHKSQPHLHDRMDISDWIT 113
Query: 115 RMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG 174
R + + + ++ L+ L S+ S VG+ G V G+ +I ++ + G
Sbjct: 114 RCLKDTMDDCVAQMQSGLAVLASIGSTAPFVGLFGTVWGIYHALLTIGATGDTSIDKVAG 173
Query: 175 II-ESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
+ ESLI GL V+IP+ + YN +K ++ FA+ A
Sbjct: 174 PVGESLIMTAFGLFVAIPAVLGYNALTRSNKAVVTKLNRFAHGLHA 219
>gi|293604394|ref|ZP_06686801.1| biopolymer transporter ExbB [Achromobacter piechaudii ATCC 43553]
gi|292817271|gb|EFF76345.1| biopolymer transporter ExbB [Achromobacter piechaudii ATCC 43553]
Length = 312
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 107/224 (47%), Gaps = 17/224 (7%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+ Q K + +L + S+++W +I+ K+ + +++R++ +F FW+ SL
Sbjct: 65 DMGFLHFVAQSDFVGKSLFIILILMSLVTWYLILVKAASNVSMRKRSADFLNKFWNASSL 124
Query: 70 ETVCKSLKNH-------HNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIA 122
E V + H H LA+ M A + K D + R M I
Sbjct: 125 EQVEHEISTHGARDPFSH---LASHAMHAQAHHNKFGATKLEESGSNSDFVTRTMRKVID 181
Query: 123 RELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII----ES 178
E ++ L+ L S+ S VG+ G V G+ + ++ G ++ V+I I E+
Sbjct: 182 EETAKLENGLTVLASVGSTAPFVGLFGTVWGV---YHALVGIGLSDGVTINRIAGPVGEA 238
Query: 179 LISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
LI LGL V+IP+ +AYN F+ +++ F +++ FA++ A L+
Sbjct: 239 LIMTGLGLAVAIPAVLAYNTFVRNNRVFLSRLDAFAHDLFAFLT 282
>gi|163851045|ref|YP_001639088.1| MotA/TolQ/ExbB proton channel [Methylobacterium extorquens PA1]
gi|218529875|ref|YP_002420691.1| MotA/TolQ/ExbB proton channel [Methylobacterium chloromethanicum
CM4]
gi|240138179|ref|YP_002962651.1| membrane spanning protein in TonB-ExbB-ExbD complex
[Methylobacterium extorquens AM1]
gi|254560739|ref|YP_003067834.1| TonB-ExbB-ExbD complex membrane spanning protein [Methylobacterium
extorquens DM4]
gi|163662650|gb|ABY30017.1| MotA/TolQ/ExbB proton channel [Methylobacterium extorquens PA1]
gi|218522178|gb|ACK82763.1| MotA/TolQ/ExbB proton channel [Methylobacterium chloromethanicum
CM4]
gi|240008148|gb|ACS39374.1| membrane spanning protein in TonB-ExbB-ExbD complex
[Methylobacterium extorquens AM1]
gi|254268017|emb|CAX23888.1| membrane spanning protein in TonB-ExbB-ExbD complex
[Methylobacterium extorquens DM4]
Length = 233
Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 100/197 (50%), Gaps = 10/197 (5%)
Query: 7 AIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG 66
A D+S LF+Q VK ++ LL + S+ W+V+ +K V +RQ + F+ + S
Sbjct: 13 AAHDMSFIGLFLQADPIVKSVMILLVVASLACWTVVFEKIVRLSAAKRQAKAFDAMVRSE 72
Query: 67 QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
+++T K + H + + + W+ + S ++RI+R M A++ E++
Sbjct: 73 GTIDTGQKGIAGH-------VVKAGLDAWRD--QDPSESRAERRERIERAMKGALSLEVK 123
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLG 185
+ L L + S VG+ G V G+M F SIA ++ V PGI E+L + +G
Sbjct: 124 RLQGGLPLLATSGSTAPFVGLFGTVWGIMNSFSSIAKSQDTSLAVVAPGIAEALFATAIG 183
Query: 186 LCVSIPSSIAYNKFIED 202
L V+IP+ +AYNK D
Sbjct: 184 LVVAIPAVMAYNKLSGD 200
>gi|331654615|ref|ZP_08355615.1| TonB-system energizer ExbB [Escherichia coli M718]
gi|331047997|gb|EGI20074.1| TonB-system energizer ExbB [Escherichia coli M718]
Length = 244
Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 104/213 (48%), Gaps = 25/213 (11%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S++ ++ + VKC++ L + S+++W++ KSV F +R+ + +QL +SL
Sbjct: 9 DLSVWGMYQHADIVVKCVMIGLILASVVTWAIFFSKSVEFFNQKRRLKREQQLLAEARSL 68
Query: 70 ETV--------CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
KSL H + A SE + S +G+ GI++R ++ +
Sbjct: 69 NQANDIAADFGSKSLSLH-------LLNEAQSELELS--EGSDDNEGIKERTSFRLERRV 119
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLI 180
A ++ +L ++ + VG+ G V G+M F IA + N+ V PGI E+L+
Sbjct: 120 AAVGRQMGRGNGYLATIGAISPFVGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGIAEALL 179
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGF 213
+ +GL +IP+ + YN FA Q+ GF
Sbjct: 180 ATAIGLVAAIPAVVIYN-------VFARQIGGF 205
>gi|218550255|ref|YP_002384046.1| biopolymer transport protein ExbB [Escherichia fergusonii ATCC
35469]
gi|218357796|emb|CAQ90440.1| membrane spanning protein in TonB-ExbB-ExbD complex [Escherichia
fergusonii ATCC 35469]
Length = 244
Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 104/206 (50%), Gaps = 11/206 (5%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S++ ++ + VKC++ L + S+++W++ KSV F +R+ + +QL +SL
Sbjct: 9 DLSVWGMYQHADIVVKCVMIGLILASVVTWAIFFTKSVEFFKQKRRLKREQQLLADARSL 68
Query: 70 ETVCKSLKNHHNIGLA-AIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ + + L+ + A +E + S G+ GI++R ++ ++A +
Sbjct: 69 DQASEIAGDFGKYSLSLQLLNEAQNELELSA--GSDDNDGIKERTSFRLERSVAAVGRYM 126
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
FL ++ + VG+ G V G+M F IA + N+ V PGI E+L++ +GL
Sbjct: 127 GRGNGFLATIGAISPFVGLFGTVWGIMNSFIGIAQSQTTNLAVVAPGIAEALLATAIGLV 186
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGF 213
+IP+ + YN FA Q+ GF
Sbjct: 187 AAIPAVVIYN-------IFARQIAGF 205
>gi|324114962|gb|EGC08927.1| tonB-system energizer ExbB [Escherichia fergusonii B253]
Length = 239
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 104/206 (50%), Gaps = 11/206 (5%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S++ ++ + VKC++ L + S+++W++ KSV F +R+ + +QL +SL
Sbjct: 4 DLSVWGMYQHADIVVKCVMIGLILASVVTWAIFFTKSVEFFKQKRRLKREQQLLADARSL 63
Query: 70 ETVCKSLKNHHNIGLA-AIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ + + L+ + A +E + S G+ GI++R ++ ++A +
Sbjct: 64 DQASEIAGDFGKYSLSLQLLNEAQNELELSA--GSDDNDGIKERTSFRLERSVAAVGRYM 121
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
FL ++ + VG+ G V G+M F IA + N+ V PGI E+L++ +GL
Sbjct: 122 GRGNGFLATIGAISPFVGLFGTVWGIMNSFIGIAQSQTTNLAVVAPGIAEALLATAIGLV 181
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGF 213
+IP+ + YN FA Q+ GF
Sbjct: 182 AAIPAVVIYN-------IFARQIAGF 200
>gi|120601889|ref|YP_966289.1| MotA/TolQ/ExbB proton channel [Desulfovibrio vulgaris DP4]
gi|120562118|gb|ABM27862.1| Cell division and transport-associated protein TolQ [Desulfovibrio
vulgaris DP4]
Length = 311
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 99/201 (49%), Gaps = 2/201 (0%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+ I L+ + ++ +L + S++SWS+I++K++ F +L + + +
Sbjct: 1 MEIIELYSHATPVARAVMAVLVVMSVVSWSIIVRKALLFRSLEGRLDGAIHRLEACDGIA 60
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
K H + + + + E+ + + A + + I D + R M A+A E +
Sbjct: 61 EAMSRFKGHADNTVWHLLRTGYREYMRLLPRRAPAEV-IADNVRRAMRHAVAEETGRLGS 119
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCVS 189
+L L + ++ +G+ G V G+M F +AG + + S+ PGI E+LI+ +GL V+
Sbjct: 120 QLPLLATTANTAPFIGLFGTVWGIMDAFHKLAGAKTAAIASVAPGISEALIATAVGLGVA 179
Query: 190 IPSSIAYNKFIEDSKKFAMQM 210
IP++I YN + ++ ++
Sbjct: 180 IPAAIGYNLHMTRVRRVQARL 200
>gi|291086577|ref|ZP_06356197.2| TonB-system energizer ExbB [Citrobacter youngae ATCC 29220]
gi|291067834|gb|EFE05943.1| TonB-system energizer ExbB [Citrobacter youngae ATCC 29220]
Length = 239
Score = 82.4 bits (202), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 109/223 (48%), Gaps = 4/223 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S++ ++ + VKC++ L + S+++W++ KS+ F T +R+ + QL +SL
Sbjct: 4 DLSVWGMYQHADIVVKCVMIGLILASVVTWAIFFSKSLEFFTQKRRLKRELQLLADARSL 63
Query: 70 ETVCKSLKNHHNIGLAAIFMS-AMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
E + L A ++ A +E + S +G+ GI++R ++ +A +
Sbjct: 64 EGASEIAAGFDAKSLGAQLINEAQNELELS--EGSDDNEGIKERTGFRLERRVAAVGRHM 121
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
+L ++ + VG+ G V G+M F IA + N+ V PGI E+L++ +GL
Sbjct: 122 GRGNGYLATIGAISPFVGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGIAEALLATAIGLV 181
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
+IP+ + YN F + + A + + SR + N S
Sbjct: 182 AAIPAVVIYNVFARQIGSYKAMLGDVAAQVLLLQSRDLDLNAS 224
>gi|115526568|ref|YP_783479.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris BisA53]
gi|115520515|gb|ABJ08499.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris BisA53]
Length = 302
Score = 82.4 bits (202), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 102/215 (47%), Gaps = 8/215 (3%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D++ +FM + VK ++ L + S+L+WSV + K + +R+ R + SL
Sbjct: 76 DLTPIGMFMAADVIVKAVMIGLALASVLTWSVWLAKIIELADAKRRLRRDLGIVEQALSL 135
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
C L+ + +A + +A E ++S D + GI++R+ + A +T
Sbjct: 136 RQSCDELREADS-DIAVLARAASGELQRSGDTASHD--GIKERVASLFARIEAAAARRMT 192
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCV 188
L ++ S G VG+ G V G+M F I+ + N+ V PGI E+L++ LGL
Sbjct: 193 RGTGILATIGSVGPFVGLFGTVWGIMNAFIGISKSQTTNLAVVAPGIAEALLATALGLVA 252
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
+IP+ + +N F + G N+ SA L R
Sbjct: 253 AIPAVVIFNMFARSITGY----RGLLNDGSAELMR 283
>gi|192359874|ref|YP_001982789.1| ExbB [Cellvibrio japonicus Ueda107]
gi|190686039|gb|ACE83717.1| ExbB [Cellvibrio japonicus Ueda107]
Length = 243
Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 100/210 (47%), Gaps = 16/210 (7%)
Query: 23 AVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNI 82
AV+ LL FSI++W++I+ K V I + R F + FWS L +L+NH
Sbjct: 8 AVELTFWLLIAFSIITWALILIKGVQNILASNRNRRFTRAFWSATDLNAAA-ALENHQ-- 64
Query: 83 GLAAIFMSAMSEWKKSCDKGARSPIGI--------QDRIDRMMDVAIARELEEITEKLSF 134
G AA +S D S G+ QD ++R + I +E + L+
Sbjct: 65 GSAAQVAQVGFRTLRSAD----SSYGLDLEHSWDRQDLLERHLRQQIQKERRSLESGLAV 120
Query: 135 LGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCVSIPSS 193
L S+ + VG+ G V G++ +I S ++ + G I +L++ G+ V+IPS
Sbjct: 121 LASIGTTAPFVGLFGTVFGIIEALTAITSNSSASIEVVAGPIGHALVATGFGIAVAIPSV 180
Query: 194 IAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
+AYN F+ K A ++ FA +F ++ +
Sbjct: 181 LAYNYFLRRLKLIAADLDDFATDFVTLVQK 210
>gi|307730278|ref|YP_003907502.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. CCGE1003]
gi|307584813|gb|ADN58211.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. CCGE1003]
Length = 242
Score = 82.0 bits (201), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 100/230 (43%), Gaps = 22/230 (9%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
M NYGLA ++ Q + I L + S+LSWSVI+ K N + L R + E
Sbjct: 1 MQNYGLA-------HVWAQGDFVTRGIALALLVMSVLSWSVIVVKGWNVVRLNRLTKNAE 53
Query: 61 QLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRID------ 114
Q FW L K L + F++ +++ D ++ + DR+D
Sbjct: 54 QAFWHSDDLADGVKKLGAGSSTPQDNPFLALALSGQEAADHHHQTQPHLHDRMDVSDWVT 113
Query: 115 ----RMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
MD ++AR + L+ L S+ S VG+ G V G+ +I +++
Sbjct: 114 RCLKDTMDESVAR----MQSGLAILASIGSTAPFVGLFGTVWGIYHALLAIGASGQSSID 169
Query: 171 SIPGII-ESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
+ G + E+LI GL V+IP+ + YN +K ++ FA+ A
Sbjct: 170 QVAGPVGEALIMTAFGLFVAIPAVLGYNALTRANKAIVAKLSRFAHGLHA 219
>gi|283787142|ref|YP_003367007.1| biopolymer transport protein [Citrobacter rodentium ICC168]
gi|282950596|emb|CBG90266.1| biopolymer transport protein [Citrobacter rodentium ICC168]
Length = 244
Score = 82.0 bits (201), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 99/199 (49%), Gaps = 18/199 (9%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S++ ++ + VKC++ L + S+++W++ KSV+F + RR+ + +Q +SL
Sbjct: 9 DLSVWGMYQHADIVVKCVMIGLILASVVTWAIFFSKSVDFFSQRRRLKREQQQLAEARSL 68
Query: 70 ETV--------CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
+ KSL + A +E + S G+ GI++R ++ +
Sbjct: 69 DQASDIAASFGAKSLNTQ-------LLNEAQNELELSA--GSEDNEGIKERTGFRLERRV 119
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLI 180
A ++ +L ++ + VG+ G V G+M F IA + N+ V PGI E+L+
Sbjct: 120 AAAGRQMGRGNGYLATIGAISPFVGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGIAEALL 179
Query: 181 SILLGLCVSIPSSIAYNKF 199
+ +GL +IP+ + YN F
Sbjct: 180 ATAIGLVAAIPAVVIYNIF 198
>gi|188580872|ref|YP_001924317.1| MotA/TolQ/ExbB proton channel [Methylobacterium populi BJ001]
gi|179344370|gb|ACB79782.1| MotA/TolQ/ExbB proton channel [Methylobacterium populi BJ001]
Length = 233
Score = 82.0 bits (201), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 99/197 (50%), Gaps = 10/197 (5%)
Query: 7 AIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG 66
A D+S LF+Q VK ++ LL + S+ W+V+ +K V +RQ + F+ + S
Sbjct: 13 AAHDMSFIGLFLQADPIVKSVMILLVVASLACWTVVFEKIVRLSAAKRQAKAFDAMVRSE 72
Query: 67 QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
+++T K + H + + + W+ + S ++RI+R M A+ E++
Sbjct: 73 GTIDTGQKGIAGH-------VVKAGLDAWRD--QDPSESRAERRERIERAMKGALGLEVK 123
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLG 185
+ L L + S VG+ G V G+M F SIA ++ V PGI E+L + +G
Sbjct: 124 RLLGGLPLLATSGSTAPFVGLFGTVWGIMNSFSSIAKSQDTSLAVVAPGIAEALFATAIG 183
Query: 186 LCVSIPSSIAYNKFIED 202
L V+IP+ +AYNK D
Sbjct: 184 LVVAIPAVMAYNKLSGD 200
>gi|298529982|ref|ZP_07017384.1| MotA/TolQ/ExbB proton channel [Desulfonatronospira thiodismutans
ASO3-1]
gi|298509356|gb|EFI33260.1| MotA/TolQ/ExbB proton channel [Desulfonatronospira thiodismutans
ASO3-1]
Length = 234
Score = 82.0 bits (201), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 103/209 (49%), Gaps = 4/209 (1%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
++++ Q L ++ I+ +L + S+ SW++II K +++ Q+F L
Sbjct: 10 LWSMLAQASLLIQFIMLVLLVMSVSSWTIIIYKFISYRRFTENLGNQLQIFDRASDLAEA 69
Query: 73 CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGI---QDRIDRMMDVAIARELEEIT 129
K ++ + L I SA+ E +K S + +D + R++ ++ L+++
Sbjct: 70 MKKVRQDADSPLYRIGFSALKEIQKLEQSQLSSSVKFRIAEDNVRRVLRQGVSTHLKKLA 129
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCV 188
L FL +++ LL+G+LG V G+M F +I ++ ++ PGI E+LI+ GL V
Sbjct: 130 SSLPFLAICANSSLLIGLLGTVWGIMNAFHAIGVQRGASLATVAPGISEALITTAFGLVV 189
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEF 217
+IP++I YN E + FA F
Sbjct: 190 AIPATIFYNILWERLNSIQADLIYFAGAF 218
>gi|258542444|ref|YP_003187877.1| ExbB/TolQ/MotA [Acetobacter pasteurianus IFO 3283-01]
gi|256633522|dbj|BAH99497.1| ExbB/TolQ/MotA [Acetobacter pasteurianus IFO 3283-01]
gi|256636581|dbj|BAI02550.1| ExbB/TolQ/MotA [Acetobacter pasteurianus IFO 3283-03]
gi|256639634|dbj|BAI05596.1| ExbB/TolQ/MotA [Acetobacter pasteurianus IFO 3283-07]
gi|256642690|dbj|BAI08645.1| ExbB/TolQ/MotA [Acetobacter pasteurianus IFO 3283-22]
gi|256645745|dbj|BAI11693.1| ExbB/TolQ/MotA [Acetobacter pasteurianus IFO 3283-26]
gi|256648798|dbj|BAI14739.1| ExbB/TolQ/MotA [Acetobacter pasteurianus IFO 3283-32]
gi|256651851|dbj|BAI17785.1| ExbB/TolQ/MotA [Acetobacter pasteurianus IFO 3283-01-42C]
gi|256654842|dbj|BAI20769.1| ExbB/TolQ/MotA [Acetobacter pasteurianus IFO 3283-12]
Length = 249
Score = 81.6 bits (200), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 109/221 (49%), Gaps = 6/221 (2%)
Query: 6 LAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS 65
LA + S + +F+ G V+C++ LL + ++L+W++ I KSV + +R + + E
Sbjct: 4 LAPISFSPWEMFLNAGPVVRCVMVLLAVAALLTWTIFIAKSVELLRVRAKLTKAEHTLEQ 63
Query: 66 GQSLETVCKSLKNHHNIGLA-AIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARE 124
+L+ + + + G+A + M+A +E +S D S G+++RI ++ A E
Sbjct: 64 AGTLDLGEEGTRKN---GIAHTLVMAAETERTRSQDIPDDSE-GLKERIVLHLERLEAAE 119
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISIL 183
+ L ++ + +G+ G V G+M F IA + ++ V PGI E+L++
Sbjct: 120 GRRLMRGTGVLATIGATSPFIGLFGTVWGIMTSFTGIAASKATSLAVVAPGIAEALLATA 179
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
LGL +IP+ + YN + Q+ + ++SR
Sbjct: 180 LGLVAAIPAVVIYNHLARQTASCRAQVADLTSLVMRLVSRD 220
>gi|15803550|ref|NP_289583.1| biopolymer transport protein ExbB [Escherichia coli O157:H7 EDL933]
gi|15833144|ref|NP_311917.1| biopolymer transport protein ExbB [Escherichia coli O157:H7 str.
Sakai]
gi|16130904|ref|NP_417479.1| membrane spanning protein in TonB-ExbB-ExbD complex [Escherichia
coli str. K-12 substr. MG1655]
gi|74313549|ref|YP_311968.1| biopolymer transport protein ExbB [Shigella sonnei Ss046]
gi|82778226|ref|YP_404575.1| biopolymer transport protein ExbB [Shigella dysenteriae Sd197]
gi|89109778|ref|AP_003558.1| membrane spanning protein in TonB-ExbB-ExbD complex [Escherichia
coli str. K-12 substr. W3110]
gi|91212418|ref|YP_542404.1| biopolymer transport protein ExbB [Escherichia coli UTI89]
gi|117625309|ref|YP_854510.1| biopolymer transport protein ExbB [Escherichia coli APEC O1]
gi|157156078|ref|YP_001464472.1| biopolymer transport protein ExbB [Escherichia coli E24377A]
gi|168747488|ref|ZP_02772510.1| TonB-system energizer ExbB [Escherichia coli O157:H7 str. EC4113]
gi|168753971|ref|ZP_02778978.1| TonB-system energizer ExbB [Escherichia coli O157:H7 str. EC4401]
gi|168760162|ref|ZP_02785169.1| TonB-system energizer ExbB [Escherichia coli O157:H7 str. EC4501]
gi|168767025|ref|ZP_02792032.1| TonB-system energizer ExbB [Escherichia coli O157:H7 str. EC4486]
gi|168773341|ref|ZP_02798348.1| TonB-system energizer ExbB [Escherichia coli O157:H7 str. EC4196]
gi|168781878|ref|ZP_02806885.1| TonB-system energizer ExbB [Escherichia coli O157:H7 str. EC4076]
gi|168785876|ref|ZP_02810883.1| TonB-system energizer ExbB [Escherichia coli O157:H7 str. EC869]
gi|168797594|ref|ZP_02822601.1| TonB-system energizer ExbB [Escherichia coli O157:H7 str. EC508]
gi|170018738|ref|YP_001723692.1| biopolymer transport protein ExbB [Escherichia coli ATCC 8739]
gi|170082551|ref|YP_001731871.1| membrane spanning protein in TonB-ExbB-ExbD complex [Escherichia
coli str. K-12 substr. DH10B]
gi|170680008|ref|YP_001745271.1| biopolymer transport protein ExbB [Escherichia coli SMS-3-5]
gi|188492681|ref|ZP_02999951.1| tonB-system energizer ExbB [Escherichia coli 53638]
gi|191167568|ref|ZP_03029380.1| TonB-system energizer ExbB [Escherichia coli B7A]
gi|191172531|ref|ZP_03034071.1| TonB-system energizer ExbB [Escherichia coli F11]
gi|193062063|ref|ZP_03043159.1| TonB-system energizer ExbB [Escherichia coli E22]
gi|193067250|ref|ZP_03048218.1| TonB-system energizer ExbB [Escherichia coli E110019]
gi|194426357|ref|ZP_03058912.1| TonB-system energizer ExbB [Escherichia coli B171]
gi|194431783|ref|ZP_03064074.1| TonB-system energizer ExbB [Shigella dysenteriae 1012]
gi|194436750|ref|ZP_03068850.1| TonB-system energizer ExbB [Escherichia coli 101-1]
gi|195937151|ref|ZP_03082533.1| biopolymer transport protein ExbB [Escherichia coli O157:H7 str.
EC4024]
gi|208807245|ref|ZP_03249582.1| tonB-system energizer ExbB [Escherichia coli O157:H7 str. EC4206]
gi|208813577|ref|ZP_03254906.1| tonB-system energizer ExbB [Escherichia coli O157:H7 str. EC4045]
gi|208818524|ref|ZP_03258844.1| tonB-system energizer ExbB [Escherichia coli O157:H7 str. EC4042]
gi|209397203|ref|YP_002272484.1| tonB-system energizer ExbB [Escherichia coli O157:H7 str. EC4115]
gi|209920481|ref|YP_002294565.1| biopolymer transport protein ExbB [Escherichia coli SE11]
gi|215488331|ref|YP_002330762.1| biopolymer transport protein ExbB [Escherichia coli O127:H6 str.
E2348/69]
gi|217327909|ref|ZP_03443992.1| tonB-system energizer ExbB [Escherichia coli O157:H7 str. TW14588]
gi|218555579|ref|YP_002388492.1| biopolymer transport protein ExbB [Escherichia coli IAI1]
gi|218560080|ref|YP_002392993.1| biopolymer transport protein ExbB [Escherichia coli S88]
gi|218691296|ref|YP_002399508.1| biopolymer transport protein ExbB [Escherichia coli ED1a]
gi|218696715|ref|YP_002404382.1| biopolymer transport protein ExbB [Escherichia coli 55989]
gi|218701779|ref|YP_002409408.1| biopolymer transport protein ExbB [Escherichia coli IAI39]
gi|218706634|ref|YP_002414153.1| biopolymer transport protein ExbB [Escherichia coli UMN026]
gi|227887711|ref|ZP_04005516.1| biopolymer transport protein ExbB [Escherichia coli 83972]
gi|237706248|ref|ZP_04536729.1| biopolymer transporter ExbB [Escherichia sp. 3_2_53FAA]
gi|238902121|ref|YP_002927917.1| membrane spanning protein in TonB-ExbB-ExbD complex [Escherichia
coli BW2952]
gi|253772156|ref|YP_003034987.1| biopolymer transporter ExbB [Escherichia coli 'BL21-Gold(DE3)pLysS
AG']
gi|254038176|ref|ZP_04872234.1| biopolymer transporter ExbB [Escherichia sp. 1_1_43]
gi|254162957|ref|YP_003046065.1| biopolymer transport protein ExbB [Escherichia coli B str. REL606]
gi|254794961|ref|YP_003079798.1| biopolymer transport protein ExbB [Escherichia coli O157:H7 str.
TW14359]
gi|256019072|ref|ZP_05432937.1| biopolymer transport protein ExbB [Shigella sp. D9]
gi|256024410|ref|ZP_05438275.1| biopolymer transport protein ExbB [Escherichia sp. 4_1_40B]
gi|260845765|ref|YP_003223543.1| membrane spanning protein ExbB [Escherichia coli O103:H2 str.
12009]
gi|260857144|ref|YP_003231035.1| membrane spanning protein ExbB [Escherichia coli O26:H11 str.
11368]
gi|260869765|ref|YP_003236167.1| membrane spanning protein ExbB [Escherichia coli O111:H- str.
11128]
gi|261228020|ref|ZP_05942301.1| membrane spanning protein in TonB-ExbB-ExbD complex [Escherichia
coli O157:H7 str. FRIK2000]
gi|261254877|ref|ZP_05947410.1| membrane spanning protein ExbB [Escherichia coli O157:H7 str.
FRIK966]
gi|291284387|ref|YP_003501205.1| Biopolymer transport protein exbB [Escherichia coli O55:H7 str.
CB9615]
gi|293406623|ref|ZP_06650549.1| biopolymer transporter ExbB [Escherichia coli FVEC1412]
gi|293412383|ref|ZP_06655106.1| tonB-system energizer ExbB [Escherichia coli B354]
gi|293416450|ref|ZP_06659089.1| tonB-system energizer ExbB [Escherichia coli B185]
gi|293449353|ref|ZP_06663774.1| tonB-system energizer ExbB [Escherichia coli B088]
gi|298382362|ref|ZP_06991959.1| biopolymer transporter exbB [Escherichia coli FVEC1302]
gi|307139696|ref|ZP_07499052.1| biopolymer transport protein ExbB [Escherichia coli H736]
gi|307310361|ref|ZP_07590009.1| tonB-system energizer ExbB [Escherichia coli W]
gi|331643708|ref|ZP_08344839.1| TonB-system energizer ExbB [Escherichia coli H736]
gi|331648796|ref|ZP_08349884.1| TonB-system energizer ExbB [Escherichia coli M605]
gi|331669972|ref|ZP_08370817.1| TonB-system energizer ExbB [Escherichia coli TA271]
gi|331674557|ref|ZP_08375317.1| TonB-system energizer ExbB [Escherichia coli TA280]
gi|331679081|ref|ZP_08379753.1| TonB-system energizer ExbB [Escherichia coli H591]
gi|332280174|ref|ZP_08392587.1| membrane spanning protein in TonB-ExbB-ExbD complex [Shigella sp.
D9]
gi|78099974|sp|P0ABU8|EXBB_ECO57 RecName: Full=Biopolymer transport protein exbB
gi|78099975|sp|P0ABU7|EXBB_ECOLI RecName: Full=Biopolymer transport protein exbB
gi|12517572|gb|AAG58142.1|AE005530_8 uptake of enterochelin; tonB-dependent uptake of B colicins
[Escherichia coli O157:H7 str. EDL933]
gi|882535|gb|AAA69173.1| exbB [Escherichia coli str. K-12 substr. MG1655]
gi|1789381|gb|AAC76042.1| membrane spanning protein in TonB-ExbB-ExbD complex [Escherichia
coli str. K-12 substr. MG1655]
gi|13363362|dbj|BAB37313.1| biopolymer transport ExbB protein [Escherichia coli O157:H7 str.
Sakai]
gi|73857026|gb|AAZ89733.1| uptake of enterochelin; tonB-dependent uptake of B colicins
[Shigella sonnei Ss046]
gi|81242374|gb|ABB63084.1| ExbB [Shigella dysenteriae Sd197]
gi|85675811|dbj|BAE77064.1| membrane spanning protein in TonB-ExbB-ExbD complex [Escherichia
coli str. K12 substr. W3110]
gi|91073992|gb|ABE08873.1| TonB-dependent enterochelin uptake protein [Escherichia coli UTI89]
gi|115514433|gb|ABJ02508.1| membrane spanning protein in TonB-ExbB-ExbD complex [Escherichia
coli APEC O1]
gi|157078108|gb|ABV17816.1| TonB-system energizer ExbB [Escherichia coli E24377A]
gi|169753666|gb|ACA76365.1| tonB-system energizer ExbB [Escherichia coli ATCC 8739]
gi|169890386|gb|ACB04093.1| membrane spanning protein in TonB-ExbB-ExbD complex [Escherichia
coli str. K-12 substr. DH10B]
gi|170517726|gb|ACB15904.1| TonB-system energizer ExbB [Escherichia coli SMS-3-5]
gi|187770997|gb|EDU34841.1| TonB-system energizer ExbB [Escherichia coli O157:H7 str. EC4196]
gi|188017796|gb|EDU55918.1| TonB-system energizer ExbB [Escherichia coli O157:H7 str. EC4113]
gi|188487880|gb|EDU62983.1| tonB-system energizer ExbB [Escherichia coli 53638]
gi|189000633|gb|EDU69619.1| TonB-system energizer ExbB [Escherichia coli O157:H7 str. EC4076]
gi|189358565|gb|EDU76984.1| TonB-system energizer ExbB [Escherichia coli O157:H7 str. EC4401]
gi|189363812|gb|EDU82231.1| TonB-system energizer ExbB [Escherichia coli O157:H7 str. EC4486]
gi|189369243|gb|EDU87659.1| TonB-system energizer ExbB [Escherichia coli O157:H7 str. EC4501]
gi|189373966|gb|EDU92382.1| TonB-system energizer ExbB [Escherichia coli O157:H7 str. EC869]
gi|189379738|gb|EDU98154.1| TonB-system energizer ExbB [Escherichia coli O157:H7 str. EC508]
gi|190902425|gb|EDV62162.1| TonB-system energizer ExbB [Escherichia coli B7A]
gi|190907199|gb|EDV66798.1| TonB-system energizer ExbB [Escherichia coli F11]
gi|192932283|gb|EDV84881.1| TonB-system energizer ExbB [Escherichia coli E22]
gi|192959207|gb|EDV89642.1| TonB-system energizer ExbB [Escherichia coli E110019]
gi|194415665|gb|EDX31932.1| TonB-system energizer ExbB [Escherichia coli B171]
gi|194420139|gb|EDX36217.1| TonB-system energizer ExbB [Shigella dysenteriae 1012]
gi|194424232|gb|EDX40219.1| TonB-system energizer ExbB [Escherichia coli 101-1]
gi|208727046|gb|EDZ76647.1| tonB-system energizer ExbB [Escherichia coli O157:H7 str. EC4206]
gi|208734854|gb|EDZ83541.1| tonB-system energizer ExbB [Escherichia coli O157:H7 str. EC4045]
gi|208738647|gb|EDZ86329.1| tonB-system energizer ExbB [Escherichia coli O157:H7 str. EC4042]
gi|209158603|gb|ACI36036.1| tonB-system energizer ExbB [Escherichia coli O157:H7 str. EC4115]
gi|209759718|gb|ACI78171.1| biopolymer transport ExbB protein [Escherichia coli]
gi|209759720|gb|ACI78172.1| biopolymer transport ExbB protein [Escherichia coli]
gi|209759722|gb|ACI78173.1| biopolymer transport ExbB protein [Escherichia coli]
gi|209759724|gb|ACI78174.1| biopolymer transport ExbB protein [Escherichia coli]
gi|209759726|gb|ACI78175.1| biopolymer transport ExbB protein [Escherichia coli]
gi|209913740|dbj|BAG78814.1| biopolymer transport protein [Escherichia coli SE11]
gi|215266403|emb|CAS10841.1| membrane spanning protein ExbB in TonB-ExbB-ExbD complex
[Escherichia coli O127:H6 str. E2348/69]
gi|217320276|gb|EEC28701.1| tonB-system energizer ExbB [Escherichia coli O157:H7 str. TW14588]
gi|218353447|emb|CAU99531.1| membrane spanning protein in TonB-ExbB-ExbD complex [Escherichia
coli 55989]
gi|218362347|emb|CAQ99969.1| membrane spanning protein in TonB-ExbB-ExbD complex [Escherichia
coli IAI1]
gi|218366849|emb|CAR04619.1| membrane spanning protein in TonB-ExbB-ExbD complex [Escherichia
coli S88]
gi|218371765|emb|CAR19618.1| membrane spanning protein in TonB-ExbB-ExbD complex [Escherichia
coli IAI39]
gi|218428860|emb|CAR09805.2| membrane spanning protein in TonB-ExbB-ExbD complex [Escherichia
coli ED1a]
gi|218433731|emb|CAR14648.1| membrane spanning protein in TonB-ExbB-ExbD complex [Escherichia
coli UMN026]
gi|222034727|emb|CAP77469.1| biopolymer transport exbB protein [Escherichia coli LF82]
gi|226839800|gb|EEH71821.1| biopolymer transporter ExbB [Escherichia sp. 1_1_43]
gi|226899288|gb|EEH85547.1| biopolymer transporter ExbB [Escherichia sp. 3_2_53FAA]
gi|227835107|gb|EEJ45573.1| biopolymer transport protein ExbB [Escherichia coli 83972]
gi|238861747|gb|ACR63745.1| membrane spanning protein in TonB-ExbB-ExbD complex [Escherichia
coli BW2952]
gi|242378560|emb|CAQ33347.1| ExbB protein; uptake of enterochelin; tonB-dependent uptake of B
colicins, subunit of TonB energy transducing system,
vitamin B12 outer membrane transport complex, vitamin
B12 transport system, Outer Membrane Ferric Enterobactin
Transport System, Ferric Enterobactin Transport System,
Outer Membrane Ferrichrome Transport System, ferrichrome
uptake system, Outer Membrane Ferric Citrate Transport
System and ferric dicitrate uptake system [Escherichia
coli BL21(DE3)]
gi|253323200|gb|ACT27802.1| tonB-system energizer ExbB [Escherichia coli 'BL21-Gold(DE3)pLysS
AG']
gi|253974858|gb|ACT40529.1| membrane spanning protein in TonB-ExbB-ExbD complex [Escherichia
coli B str. REL606]
gi|253979014|gb|ACT44684.1| membrane spanning protein in TonB-ExbB-ExbD complex [Escherichia
coli BL21(DE3)]
gi|254594361|gb|ACT73722.1| membrane spanning protein in TonB-ExbB-ExbD complex [Escherichia
coli O157:H7 str. TW14359]
gi|257755793|dbj|BAI27295.1| membrane spanning protein ExbB [Escherichia coli O26:H11 str.
11368]
gi|257760912|dbj|BAI32409.1| membrane spanning protein ExbB [Escherichia coli O103:H2 str.
12009]
gi|257766121|dbj|BAI37616.1| membrane spanning protein ExbB [Escherichia coli O111:H- str.
11128]
gi|260447955|gb|ACX38377.1| tonB-system energizer ExbB [Escherichia coli DH1]
gi|281180045|dbj|BAI56375.1| biopolymer transport protein [Escherichia coli SE15]
gi|284923031|emb|CBG36124.1| biopolymer transport protein [Escherichia coli 042]
gi|290764260|gb|ADD58221.1| Biopolymer transport protein exbB [Escherichia coli O55:H7 str.
CB9615]
gi|291322443|gb|EFE61872.1| tonB-system energizer ExbB [Escherichia coli B088]
gi|291426629|gb|EFE99661.1| biopolymer transporter ExbB [Escherichia coli FVEC1412]
gi|291431806|gb|EFF04789.1| tonB-system energizer ExbB [Escherichia coli B185]
gi|291469154|gb|EFF11645.1| tonB-system energizer ExbB [Escherichia coli B354]
gi|294491817|gb|ADE90573.1| TonB-system energizer ExbB [Escherichia coli IHE3034]
gi|298277502|gb|EFI19018.1| biopolymer transporter exbB [Escherichia coli FVEC1302]
gi|306909256|gb|EFN39751.1| tonB-system energizer ExbB [Escherichia coli W]
gi|307625392|gb|ADN69696.1| biopolymer transport protein ExbB [Escherichia coli UM146]
gi|309703439|emb|CBJ02779.1| biopolymer transport protein [Escherichia coli ETEC H10407]
gi|312947565|gb|ADR28392.1| biopolymer transport protein ExbB [Escherichia coli O83:H1 str. NRG
857C]
gi|315062322|gb|ADT76649.1| membrane spanning protein in TonB-ExbB-ExbD complex [Escherichia
coli W]
gi|315137602|dbj|BAJ44761.1| biopolymer transport protein exbB [Escherichia coli DH1]
gi|320180965|gb|EFW55886.1| MotA/TolQ/ExbB proton channel family protein [Shigella boydii ATCC
9905]
gi|320189361|gb|EFW64020.1| MotA/TolQ/ExbB proton channel family protein [Escherichia coli
O157:H7 str. EC1212]
gi|320195155|gb|EFW69784.1| MotA/TolQ/ExbB proton channel family protein [Escherichia coli
WV_060327]
gi|320201922|gb|EFW76497.1| MotA/TolQ/ExbB proton channel family protein [Escherichia coli
EC4100B]
gi|320640082|gb|EFX09654.1| biopolymer transport protein ExbB [Escherichia coli O157:H7 str.
G5101]
gi|320645380|gb|EFX14389.1| biopolymer transport protein ExbB [Escherichia coli O157:H- str.
493-89]
gi|320650693|gb|EFX19150.1| biopolymer transport protein ExbB [Escherichia coli O157:H- str. H
2687]
gi|320656387|gb|EFX24294.1| biopolymer transport protein ExbB [Escherichia coli O55:H7 str.
3256-97 TW 07815]
gi|320661760|gb|EFX29168.1| biopolymer transport protein ExbB [Escherichia coli O55:H7 str.
USDA 5905]
gi|320666911|gb|EFX33887.1| biopolymer transport protein ExbB [Escherichia coli O157:H7 str.
LSU-61]
gi|323377092|gb|ADX49360.1| tonB-system energizer ExbB [Escherichia coli KO11]
gi|326337715|gb|EGD61549.1| MotA/TolQ/ExbB proton channel family protein [Escherichia coli
O157:H7 str. 1125]
gi|326347279|gb|EGD71004.1| MotA/TolQ/ExbB proton channel family protein [Escherichia coli
O157:H7 str. 1044]
gi|330909062|gb|EGH37576.1| motA/TolQ/ExbB proton channel family protein [Escherichia coli
AA86]
gi|331037179|gb|EGI09403.1| TonB-system energizer ExbB [Escherichia coli H736]
gi|331042543|gb|EGI14685.1| TonB-system energizer ExbB [Escherichia coli M605]
gi|331062885|gb|EGI34799.1| TonB-system energizer ExbB [Escherichia coli TA271]
gi|331068651|gb|EGI40046.1| TonB-system energizer ExbB [Escherichia coli TA280]
gi|331073146|gb|EGI44469.1| TonB-system energizer ExbB [Escherichia coli H591]
gi|332102526|gb|EGJ05872.1| membrane spanning protein in TonB-ExbB-ExbD complex [Shigella sp.
D9]
Length = 244
Score = 81.6 bits (200), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 104/213 (48%), Gaps = 25/213 (11%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S++ ++ + VKC++ L + S+++W++ KSV F +R+ + +QL +SL
Sbjct: 9 DLSVWGMYQHADIVVKCVMIGLILASVVTWAIFFSKSVEFFNQKRRLKREQQLLAEARSL 68
Query: 70 ETV--------CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
KSL H + A +E + S +G+ GI++R ++ +
Sbjct: 69 NQANDIAADFGSKSLSLH-------LLNEAQNELELS--EGSDDNEGIKERTSFRLERRV 119
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLI 180
A ++ +L ++ + VG+ G V G+M F IA + N+ V PGI E+L+
Sbjct: 120 AAVGRQMGRGNGYLATIGAISPFVGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGIAEALL 179
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGF 213
+ +GL +IP+ + YN FA Q+ GF
Sbjct: 180 ATAIGLVAAIPAVVIYN-------VFARQIGGF 205
>gi|209520630|ref|ZP_03269383.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. H160]
gi|209498913|gb|EDZ99015.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. H160]
Length = 243
Score = 81.6 bits (200), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 103/234 (44%), Gaps = 30/234 (12%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
M NYGLA ++ Q + I L + S++SWSVI+ K N + L+R + E
Sbjct: 1 MQNYGLA-------HVWAQGDFVTRGIALALLLMSVMSWSVIVVKGWNVMRLKRLTKNAE 53
Query: 61 QLFWSGQSLETVCKSL----KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRID-- 114
Q FW L K L H+ A+ +S +++ D ++ + DR+D
Sbjct: 54 QAFWHSDDLADGVKKLGGGAPTPHDNPFVALALSG----QEAADHHHQTQPHLHDRMDVS 109
Query: 115 --------RMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYS 166
MD ++AR + L+ L S+ S VG+ G V G+ +I
Sbjct: 110 DWITRCLKDTMDESVAR----MQSGLAILASIGSTAPFVGLFGTVWGIYHALLAIGASSQ 165
Query: 167 NNVVSIPGII-ESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
+++ + G + E+LI GL V+IP+ + YN +K ++ FA+ A
Sbjct: 166 SSIDQVAGPVGEALIMTAFGLFVAIPAVLGYNALTRANKAIVAKLSRFAHGLHA 219
>gi|91782684|ref|YP_557890.1| biopolymer transport transmembrane protein, MotA/TolQ/ExbB like
[Burkholderia xenovorans LB400]
gi|91686638|gb|ABE29838.1| outer membrane transport energization protein ExbB [Burkholderia
xenovorans LB400]
Length = 242
Score = 81.6 bits (200), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 101/230 (43%), Gaps = 22/230 (9%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
M NYGLA ++ Q + I L I S++SWSVI+ K N + L+R + E
Sbjct: 1 MQNYGLA-------HVWAQGDFVTRGIALTLLIMSVMSWSVIVIKGWNVMRLKRLTKNAE 53
Query: 61 QLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRID------ 114
Q FW L K L + F++ +++ D ++ + DR+D
Sbjct: 54 QAFWHSDDLADGVKKLGAGSSTPQDNPFLALALSGQEAADHHHQTQPHLHDRMDVSDWVT 113
Query: 115 ----RMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
MD ++AR + L+ L S+ S VG+ G V G+ +I +++
Sbjct: 114 RCLKDTMDESVAR----MQSGLAILASIGSTAPFVGLFGTVWGIYHALLAIGASGQSSID 169
Query: 171 SIPGII-ESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
+ G + E+LI GL V+IP+ + YN +K ++ FA+ A
Sbjct: 170 QVAGPVGEALIMTAFGLFVAIPAVLGYNALTRANKAVVAKLSRFAHGLHA 219
>gi|110643244|ref|YP_670974.1| biopolymer transport protein ExbB [Escherichia coli 536]
gi|110806907|ref|YP_690427.1| biopolymer transport protein ExbB [Shigella flexneri 5 str. 8401]
gi|300818770|ref|ZP_07098976.1| TonB-system energizer ExbB [Escherichia coli MS 107-1]
gi|300821591|ref|ZP_07101737.1| TonB-system energizer ExbB [Escherichia coli MS 119-7]
gi|300901385|ref|ZP_07119471.1| TonB-system energizer ExbB [Escherichia coli MS 198-1]
gi|300905865|ref|ZP_07123598.1| TonB-system energizer ExbB [Escherichia coli MS 84-1]
gi|300916885|ref|ZP_07133588.1| TonB-system energizer ExbB [Escherichia coli MS 115-1]
gi|300923665|ref|ZP_07139692.1| TonB-system energizer ExbB [Escherichia coli MS 182-1]
gi|300931892|ref|ZP_07147189.1| TonB-system energizer ExbB [Escherichia coli MS 187-1]
gi|300935666|ref|ZP_07150638.1| TonB-system energizer ExbB [Escherichia coli MS 21-1]
gi|300950785|ref|ZP_07164672.1| TonB-system energizer ExbB [Escherichia coli MS 116-1]
gi|300958391|ref|ZP_07170531.1| TonB-system energizer ExbB [Escherichia coli MS 175-1]
gi|300973363|ref|ZP_07172163.1| TonB-system energizer ExbB [Escherichia coli MS 45-1]
gi|300993145|ref|ZP_07180231.1| TonB-system energizer ExbB [Escherichia coli MS 200-1]
gi|301048179|ref|ZP_07195215.1| TonB-system energizer ExbB [Escherichia coli MS 185-1]
gi|301304190|ref|ZP_07210306.1| TonB-system energizer ExbB [Escherichia coli MS 124-1]
gi|309785160|ref|ZP_07679791.1| tonB-system energizer ExbB [Shigella dysenteriae 1617]
gi|309793571|ref|ZP_07687997.1| TonB-system energizer ExbB [Escherichia coli MS 145-7]
gi|312968660|ref|ZP_07782869.1| tonB-system energizer ExbB [Escherichia coli 2362-75]
gi|312972731|ref|ZP_07786904.1| tonB-system energizer ExbB [Escherichia coli 1827-70]
gi|331659287|ref|ZP_08360229.1| TonB-system energizer ExbB [Escherichia coli TA206]
gi|331684650|ref|ZP_08385242.1| TonB-system energizer ExbB [Escherichia coli H299]
gi|110344836|gb|ABG71073.1| biopolymer transport ExbB protein [Escherichia coli 536]
gi|110616455|gb|ABF05122.1| Biopolymer transport exbB protein [Shigella flexneri 5 str. 8401]
gi|300299937|gb|EFJ56322.1| TonB-system energizer ExbB [Escherichia coli MS 185-1]
gi|300305160|gb|EFJ59680.1| TonB-system energizer ExbB [Escherichia coli MS 200-1]
gi|300314900|gb|EFJ64684.1| TonB-system energizer ExbB [Escherichia coli MS 175-1]
gi|300355157|gb|EFJ71027.1| TonB-system energizer ExbB [Escherichia coli MS 198-1]
gi|300402334|gb|EFJ85872.1| TonB-system energizer ExbB [Escherichia coli MS 84-1]
gi|300410792|gb|EFJ94330.1| TonB-system energizer ExbB [Escherichia coli MS 45-1]
gi|300415855|gb|EFJ99165.1| TonB-system energizer ExbB [Escherichia coli MS 115-1]
gi|300420032|gb|EFK03343.1| TonB-system energizer ExbB [Escherichia coli MS 182-1]
gi|300449955|gb|EFK13575.1| TonB-system energizer ExbB [Escherichia coli MS 116-1]
gi|300459139|gb|EFK22632.1| TonB-system energizer ExbB [Escherichia coli MS 21-1]
gi|300460315|gb|EFK23808.1| TonB-system energizer ExbB [Escherichia coli MS 187-1]
gi|300525729|gb|EFK46798.1| TonB-system energizer ExbB [Escherichia coli MS 119-7]
gi|300528555|gb|EFK49617.1| TonB-system energizer ExbB [Escherichia coli MS 107-1]
gi|300840603|gb|EFK68363.1| TonB-system energizer ExbB [Escherichia coli MS 124-1]
gi|307555099|gb|ADN47874.1| TonB-dependent enterochelin uptake protein [Escherichia coli ABU
83972]
gi|308122528|gb|EFO59790.1| TonB-system energizer ExbB [Escherichia coli MS 145-7]
gi|308926280|gb|EFP71756.1| tonB-system energizer ExbB [Shigella dysenteriae 1617]
gi|310332673|gb|EFP99886.1| tonB-system energizer ExbB [Escherichia coli 1827-70]
gi|312286878|gb|EFR14789.1| tonB-system energizer ExbB [Escherichia coli 2362-75]
gi|315256907|gb|EFU36875.1| TonB-system energizer ExbB [Escherichia coli MS 85-1]
gi|315288761|gb|EFU48159.1| TonB-system energizer ExbB [Escherichia coli MS 110-3]
gi|315295040|gb|EFU54377.1| TonB-system energizer ExbB [Escherichia coli MS 153-1]
gi|315297741|gb|EFU57018.1| TonB-system energizer ExbB [Escherichia coli MS 16-3]
gi|315615009|gb|EFU95647.1| tonB-system energizer ExbB [Escherichia coli 3431]
gi|323154705|gb|EFZ40904.1| tonB-system energizer ExbB [Escherichia coli EPECa14]
gi|323163060|gb|EFZ48893.1| tonB-system energizer ExbB [Escherichia coli E128010]
gi|323168150|gb|EFZ53837.1| tonB-system energizer ExbB [Shigella sonnei 53G]
gi|323178714|gb|EFZ64290.1| tonB-system energizer ExbB [Escherichia coli 1180]
gi|323183595|gb|EFZ68992.1| tonB-system energizer ExbB [Escherichia coli 1357]
gi|323935990|gb|EGB32285.1| tonB-system energizer ExbB [Escherichia coli E1520]
gi|323941893|gb|EGB38072.1| tonB-system energizer ExbB [Escherichia coli E482]
gi|323946747|gb|EGB42767.1| tonB-system energizer ExbB [Escherichia coli H120]
gi|323951473|gb|EGB47348.1| tonB-system energizer ExbB [Escherichia coli H252]
gi|323957845|gb|EGB53559.1| tonB-system energizer ExbB [Escherichia coli H263]
gi|323960945|gb|EGB56564.1| tonB-system energizer ExbB [Escherichia coli H489]
gi|323971866|gb|EGB67091.1| tonB-system energizer ExbB [Escherichia coli TA007]
gi|323978920|gb|EGB74000.1| tonB-system energizer ExbB [Escherichia coli TW10509]
gi|324005413|gb|EGB74632.1| TonB-system energizer ExbB [Escherichia coli MS 57-2]
gi|324011898|gb|EGB81117.1| TonB-system energizer ExbB [Escherichia coli MS 60-1]
gi|324018149|gb|EGB87368.1| TonB-system energizer ExbB [Escherichia coli MS 117-3]
gi|324119620|gb|EGC13501.1| tonB-system energizer ExbB [Escherichia coli E1167]
gi|331053869|gb|EGI25898.1| TonB-system energizer ExbB [Escherichia coli TA206]
gi|331078265|gb|EGI49471.1| TonB-system energizer ExbB [Escherichia coli H299]
gi|332088502|gb|EGI93619.1| tonB-system energizer ExbB [Shigella dysenteriae 155-74]
gi|332998949|gb|EGK18540.1| tonB-system energizer ExbB [Shigella flexneri VA-6]
gi|332999759|gb|EGK19343.1| tonB-system energizer ExbB [Shigella flexneri K-272]
gi|333015625|gb|EGK34964.1| tonB-system energizer ExbB [Shigella flexneri K-227]
Length = 239
Score = 81.6 bits (200), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 104/213 (48%), Gaps = 25/213 (11%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S++ ++ + VKC++ L + S+++W++ KSV F +R+ + +QL +SL
Sbjct: 4 DLSVWGMYQHADIVVKCVMIGLILASVVTWAIFFSKSVEFFNQKRRLKREQQLLAEARSL 63
Query: 70 ETV--------CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
KSL H + A +E + S +G+ GI++R ++ +
Sbjct: 64 NQANDIAADFGSKSLSLH-------LLNEAQNELELS--EGSDDNEGIKERTSFRLERRV 114
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLI 180
A ++ +L ++ + VG+ G V G+M F IA + N+ V PGI E+L+
Sbjct: 115 AAVGRQMGRGNGYLATIGAISPFVGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGIAEALL 174
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGF 213
+ +GL +IP+ + YN FA Q+ GF
Sbjct: 175 ATAIGLVAAIPAVVIYN-------VFARQIGGF 200
>gi|301643625|ref|ZP_07243666.1| TonB-system energizer ExbB [Escherichia coli MS 146-1]
gi|301078009|gb|EFK92815.1| TonB-system energizer ExbB [Escherichia coli MS 146-1]
Length = 239
Score = 81.6 bits (200), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 104/213 (48%), Gaps = 25/213 (11%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S++ ++ + VKC++ L + S+++W++ KSV F +R+ + +QL +SL
Sbjct: 4 DLSVWGMYQHADIVVKCVMIGLILASVVTWAIFFSKSVEFFNQKRRLKREQQLLAEARSL 63
Query: 70 ETV--------CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
KSL H + A +E + S +G+ GI++R ++ +
Sbjct: 64 NQANDIAADFGSKSLSLH-------LLNEAQNELELS--EGSDDNEGIKERTSFRLERRV 114
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLI 180
A ++ +L ++ + VG+ G V G+M F IA + N+ V PGI E+L+
Sbjct: 115 AAVGRQMGRGNGYLATIGAISPFVGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGIAEALL 174
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGF 213
+ +GL +IP+ + YN FA Q+ GF
Sbjct: 175 ATAIGLVAAIPAVVIYN-------VFARQIGGF 200
>gi|186476701|ref|YP_001858171.1| MotA/TolQ/ExbB proton channel [Burkholderia phymatum STM815]
gi|184193160|gb|ACC71125.1| MotA/TolQ/ExbB proton channel [Burkholderia phymatum STM815]
Length = 243
Score = 81.6 bits (200), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 101/230 (43%), Gaps = 22/230 (9%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
M NYG+A ++ Q + I L I S+LSWSVI+ KS N + L R R E
Sbjct: 1 MQNYGIA-------HVWAQGDFVTRGIALALLIMSVLSWSVIVVKSWNVMRLNRLTRNAE 53
Query: 61 QLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRID------ 114
+ FW K L + + F++ +++ D ++ + DR+D
Sbjct: 54 KAFWHSDDFADGAKKLGSDTSSPTENPFLALALSGQEAADHHHQTQPHLHDRMDVSDWVT 113
Query: 115 ----RMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
MD ++AR + L+ L S+ S VG+ G V G+ +I +++
Sbjct: 114 RCLKDTMDESVAR----MQAGLAILASIGSTAPFVGLFGTVWGIYHALLTIGATGQSSID 169
Query: 171 SIPGII-ESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
+ G + E+LI GL V+IP+ + YN +K ++ FA+ A
Sbjct: 170 QVAGPVGEALIMTAFGLFVAIPAVLGYNALTRANKGIVSKLNRFAHGLHA 219
>gi|332344963|gb|AEE58297.1| tonB-system energizer ExbB [Escherichia coli UMNK88]
Length = 239
Score = 81.3 bits (199), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 107/209 (51%), Gaps = 17/209 (8%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S++ ++ + VKC++ L + S+++W++ KSV F +R+ + +QL +SL
Sbjct: 4 DLSVWGMYQHADIVVKCVMIGLILASVVTWAIFFSKSVEFFNQKRRLKREQQLLAEARSL 63
Query: 70 ETVCKSLKNH--HNIGLAAIFMSAMSEWKKSCD--KGARSPIGIQDRIDRMMDVAIAREL 125
+L N + G ++ + ++E + + +G+ GI++R ++ +A
Sbjct: 64 -----NLANDIAADFGSKSLSLHLLNEAQNELELSEGSDDNEGIKERTSFRLERRVAAVG 118
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILL 184
++ +L ++ + VG+ G V G+M F IA + N+ V PGI E+L++ +
Sbjct: 119 RQMGRGNGYLATIGAISPFVGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGIAEALLATAI 178
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGF 213
GL +IP+ + YN FA Q+ GF
Sbjct: 179 GLVAAIPAVVIYN-------VFARQIGGF 200
>gi|294056290|ref|YP_003549948.1| MotA/TolQ/ExbB proton channel [Coraliomargarita akajimensis DSM
45221]
gi|293615623|gb|ADE55778.1| MotA/TolQ/ExbB proton channel [Coraliomargarita akajimensis DSM
45221]
Length = 244
Score = 81.3 bits (199), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 110/228 (48%), Gaps = 13/228 (5%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL-- 69
++F F Q A K +I +L + S+L+WSV++ K ++ LR Q + +E+L L
Sbjct: 19 NVFTYFAQSNFAGKIVILILVVCSVLAWSVMLGKYMDMSRLRSQNQRYERLLSRESHLLA 78
Query: 70 ---ETVCKSLKNHHNI---GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAR 123
K ++NI GL A F + +++ + R +A
Sbjct: 79 LDPSRPGKGAGPYYNIVREGLEAFFRYGGDLADPDTHRATLRMGHVENALQR----GVAD 134
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISI 182
+ K+ LGS+ + +G+LG V G+M F +AG S ++ S+ PG+ +L++
Sbjct: 135 QTIRYEAKMVLLGSIVTGAPFLGLLGTVWGVMDAFGGMAGSGSASLQSLAPGVSGALLTT 194
Query: 183 LLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
+ GL V+IPS YN ++ +K +++E FA+ + + + + +S
Sbjct: 195 VAGLVVAIPSVFGYNYLLQQTKISVVELENFASTVADRIELEAQAAVS 242
>gi|317402708|gb|EFV83256.1| MotA/TolQ/ExbB proton channel family protein [Achromobacter
xylosoxidans C54]
Length = 254
Score = 81.3 bits (199), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 107/226 (47%), Gaps = 17/226 (7%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
+ D+ Q K + +L + S+++W +I+ K + I++RR+ +F FW+
Sbjct: 5 VPDMGFLHFVAQSDFVGKTLFIILILMSLVTWYLILVKVGSNISMRRRSADFLNKFWNSS 64
Query: 68 SLETVCKSLKNH-------HNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVA 120
SLE V + H H LA+ M A + K D + R M
Sbjct: 65 SLEQVEHEITTHGARDPFSH---LASHAMHAQAHHNKFGATKLEEAGSNGDFVTRTMRKV 121
Query: 121 IARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII---- 176
I E ++ L+ L S+ S VG+ G V G+ + ++ G ++ V+I I
Sbjct: 122 IDEETAKLENGLTVLASVGSTAPFVGLFGTVWGV---YHALVGIGLSDGVTINRIAGPVG 178
Query: 177 ESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
E+LI LGL V+IP+ +AYN F+ +++ + +++ FA++ A L+
Sbjct: 179 EALIMTGLGLAVAIPAVLAYNTFVRNNRVYLSRLDAFAHDLFAFLT 224
>gi|254443562|ref|ZP_05057038.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Verrucomicrobiae bacterium DG1235]
gi|198257870|gb|EDY82178.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Verrucomicrobiae bacterium DG1235]
Length = 227
Score = 81.3 bits (199), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 104/221 (47%), Gaps = 7/221 (3%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLET 71
S+F F Q LA K II L FS+ +W+V+I K LR FE S+
Sbjct: 8 SLFTYFSQSNLAGKFIIMALAFFSVCAWAVMIGKYWELKKLRLLNLGFEHNLHRQPSVLV 67
Query: 72 VCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQ----DRIDRMMDVAIARELEE 127
+ K + A++++ A+ + + K S ++ + ++ + A+A +
Sbjct: 68 PPSTFKAPRQVPYASLYIDAVDAYHRIKAKDGESDEQLRSARVEHVENALQRALANKTLN 127
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVS--IPGIIESLISILLG 185
+ FL ++ S G+LG V G+M F S+ G +N + PG+ +L++ + G
Sbjct: 128 YESSMVFLATIVSGAPFFGLLGTVWGVMDAFGSM-GLQANATLQNLAPGVSGALLTTVAG 186
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
LCV+IPS YN + +K ++E FA+ + ++ ++
Sbjct: 187 LCVAIPSVFGYNYLLSRTKILVTELENFASALADVIELESR 227
>gi|26249572|ref|NP_755612.1| biopolymer transport protein ExbB [Escherichia coli CFT073]
gi|306816653|ref|ZP_07450785.1| biopolymer transport protein ExbB [Escherichia coli NC101]
gi|26109980|gb|AAN82185.1|AE016766_273 Biopolymer transport exbB protein [Escherichia coli CFT073]
gi|305850218|gb|EFM50677.1| biopolymer transport protein ExbB [Escherichia coli NC101]
Length = 244
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 104/205 (50%), Gaps = 9/205 (4%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S++ ++ + VKC++ L + S+++W++ KSV F +R+ + +QL +SL
Sbjct: 9 DLSVWGMYQHADIVVKCVMIGLILASVVTWAIFFSKSVEFFNQKRRLKREQQLLAEARSL 68
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+ + L ++++ ++ + +G+ GI++R ++ +A ++
Sbjct: 69 NQANDIAADFGSKSL-SLYLLNEAQNELELSEGSDDNEGIKERTSFRLERRVAAVGRQMG 127
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCV 188
+L ++ + VG+ G V G+M F IA + N+ V PGI E+L++ +GL
Sbjct: 128 RGNGYLATIGAISPFVGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGIAEALLATAIGLVA 187
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGF 213
+IP+ + YN FA Q+ GF
Sbjct: 188 AIPAVVIYN-------VFARQIGGF 205
>gi|301325646|ref|ZP_07219110.1| TonB-system energizer ExbB [Escherichia coli MS 78-1]
gi|300847564|gb|EFK75324.1| TonB-system energizer ExbB [Escherichia coli MS 78-1]
gi|323966535|gb|EGB61968.1| tonB-system energizer ExbB [Escherichia coli M863]
gi|327251789|gb|EGE63475.1| tonB-system energizer ExbB [Escherichia coli STEC_7v]
Length = 239
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 103/213 (48%), Gaps = 25/213 (11%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S++ ++ + VKC++ L + S+++W++ KSV F +R+ + +QL +SL
Sbjct: 4 DLSVWGMYQHADIVVKCVMIGLILASVVTWAIFFSKSVEFFNQKRRLKREQQLLAQARSL 63
Query: 70 ETV--------CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
KSL H + A E + S +G+ GI++R ++ +
Sbjct: 64 NQANDIAADFGSKSLSLH-------LLNEAQDELELS--EGSDDNEGIKERTSFRLERRV 114
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLI 180
A ++ +L ++ + VG+ G V G+M F IA + N+ V PGI E+L+
Sbjct: 115 AAVGRQMGRGNGYLATIGAISPFVGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGIAEALL 174
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGF 213
+ +GL +IP+ + YN FA Q+ GF
Sbjct: 175 ATAIGLVAAIPAVVIYN-------VFARQIGGF 200
>gi|332086664|gb|EGI91804.1| tonB-system energizer ExbB [Shigella boydii 5216-82]
Length = 239
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 104/213 (48%), Gaps = 25/213 (11%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S++ ++ + VKC++ L + S+++W++ KSV F +R+ + +QL +SL
Sbjct: 4 DLSVWGMYQHADIVVKCVMIGLILASVVTWAIFFSKSVEFFNQKRRLKREQQLLAEARSL 63
Query: 70 ETV--------CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
KSL H + A +E + S +G+ GI++R ++ +
Sbjct: 64 NQANDIAADFGSKSLSLH-------LINEAQNELELS--EGSDDNEGIKERTSFRLERRV 114
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLI 180
A ++ +L ++ + VG+ G V G+M F IA + N+ V PGI E+L+
Sbjct: 115 AAVGRQMGRGNGYLATIGAISPFVGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGIAEALL 174
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGF 213
+ +GL +IP+ + YN FA Q+ GF
Sbjct: 175 ATAIGLVAAIPAVVIYN-------VFARQIGGF 200
>gi|157162484|ref|YP_001459802.1| biopolymer transport protein ExbB [Escherichia coli HS]
gi|157068164|gb|ABV07419.1| TonB-system energizer ExbB [Escherichia coli HS]
Length = 244
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 104/213 (48%), Gaps = 25/213 (11%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S++ ++ + VKC++ L + S+++W++ KSV F +R+ + +QL +SL
Sbjct: 9 DLSVWGMYQHADIVVKCVMIGLILASVVTWAIFFSKSVEFFNQKRRLKREQQLLAEARSL 68
Query: 70 ETV--------CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
KSL H + A +E + S +G+ GI++R ++ +
Sbjct: 69 NQANDIAADFGSKSLSLH-------LLNEAQNELELS--EGSDDNEGIKERTSFRLERRV 119
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLI 180
A ++ +L ++ + VG+ G V G+M F IA + N+ V PGI E+L+
Sbjct: 120 AAVGRQMGRGNGYLATIGAISPFVGLFGTVWGIMNSFIGIAQTQTANLAVVAPGIAEALL 179
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGF 213
+ +GL +IP+ + YN FA Q+ GF
Sbjct: 180 ATAIGLVAAIPAVVIYN-------VFARQIGGF 205
>gi|46580793|ref|YP_011601.1| tolQ protein [Desulfovibrio vulgaris str. Hildenborough]
gi|46450213|gb|AAS96861.1| tolQ protein [Desulfovibrio vulgaris str. Hildenborough]
gi|311234500|gb|ADP87354.1| MotA/TolQ/ExbB proton channel [Desulfovibrio vulgaris RCH1]
Length = 317
Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 94/188 (50%), Gaps = 2/188 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+ I L+ + ++ +L + S++SWS+I++K++ F ++ + + +
Sbjct: 1 MEIIELYSHATPVARAVMAVLVVMSVVSWSIIVRKALLFRSIEGRLDGAIHRLEACDGIA 60
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
K H + + + + E+ + + A + + I D + R M A+A E +
Sbjct: 61 EAMSRFKGHADNTVWHLLRTGYREYMRLLPRRAPAEV-IADNVRRAMRHAVAEETGRLGS 119
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCVS 189
+L L + ++ +G+ G V G+M F +AG + + S+ PGI E+LI+ +GL V+
Sbjct: 120 QLPLLATTANTAPFIGLFGTVWGIMDAFHKLAGAKTAAIASVAPGISEALIATAVGLGVA 179
Query: 190 IPSSIAYN 197
IP++I YN
Sbjct: 180 IPAAIGYN 187
>gi|299770153|ref|YP_003732179.1| putative biopolymer transport protein (ExbB-like) [Acinetobacter
sp. DR1]
gi|298700241|gb|ADI90806.1| putative biopolymer transport protein (ExbB-like) [Acinetobacter
sp. DR1]
Length = 244
Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 100/194 (51%), Gaps = 5/194 (2%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL-ETVCKSLKNHHNIG-LA 85
I LL FSI++W +I+ K V RQ + F + FWS ++L + + KS + +A
Sbjct: 13 IWLLVAFSIVTWGLIVIKLVQTQKANRQSKAFAEEFWSAKNLQDAIQKSEAGEGPVARIA 72
Query: 86 AIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLV 145
+++ + + QD ++R + I E ++ + + L S+ + +
Sbjct: 73 NTGFKTLADADDDTHQDLQHSWSRQDLLERHLRKQILSERRQLEKGSALLASIGNNAPFI 132
Query: 146 GILGAVLGMMGFFQSIA--GYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDS 203
G+ G V G++ Q+IA G S +VV+ P I E+L++ +G+ V++P+ +AYN F+
Sbjct: 133 GLFGTVFGIIHALQAIAHSGNASMDVVAGP-IGEALVATGIGIAVAVPAVLAYNYFVRKV 191
Query: 204 KKFAMQMEGFANEF 217
K +++ FA +F
Sbjct: 192 KTIGAELDDFATDF 205
>gi|170766052|ref|ZP_02900863.1| TonB-system energizer ExbB [Escherichia albertii TW07627]
gi|170125198|gb|EDS94129.1| TonB-system energizer ExbB [Escherichia albertii TW07627]
Length = 244
Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 104/213 (48%), Gaps = 25/213 (11%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S++ ++ + VKC++ L + S+++W++ KSV F +R+ + +Q+ +SL
Sbjct: 9 DLSVWGMYQHADIVVKCVMIGLILASVVTWAIFFSKSVEFFNQKRRLKREQQMLAEARSL 68
Query: 70 ETV--------CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
KSL H + A +E + S +G+ GI++R ++ +
Sbjct: 69 NQANDIAADFGSKSLSLH-------LLNEAQNELELS--EGSDDNEGIKERTSFRLERRV 119
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLI 180
A ++ +L ++ + VG+ G V G+M F IA + N+ V PGI E+L+
Sbjct: 120 AAVGRQMGRGNGYLATIGAISPFVGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGIAEALL 179
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGF 213
+ +GL +IP+ + YN FA Q+ GF
Sbjct: 180 ATAIGLVAAIPAVVIYN-------VFARQIGGF 205
>gi|293394345|ref|ZP_06638645.1| TonB system transporter ExbB [Serratia odorifera DSM 4582]
gi|291423323|gb|EFE96552.1| TonB system transporter ExbB [Serratia odorifera DSM 4582]
Length = 317
Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 99/193 (51%), Gaps = 4/193 (2%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
MD+S++ ++ + VK ++ L + SI++W+++ K +R+ R Q +S
Sbjct: 81 MDLSVWGMYQHADVVVKTVMIGLVLASIITWTILFAKGSELTRAKRRLRREHQALSEARS 140
Query: 69 LETVCKSLKNHHNIGLAAIFMS-AMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
L+ + ++ N ++A ++ A +E + S + + GI++R + +A +
Sbjct: 141 LDEATEMAQSFQNDSISATLLNDAQNELELSAESNDNN--GIKERAGFRFERRVAAYGRQ 198
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
+ + FL ++ + VG+ G V G+M F IA + N+ V PGI E+L++ LGL
Sbjct: 199 LGKGNGFLATIGAISPFVGLFGTVWGIMNSFIGIAHSQTTNLAVVAPGIAEALLATALGL 258
Query: 187 CVSIPSSIAYNKF 199
+IP+ + YN F
Sbjct: 259 VAAIPAVVIYNIF 271
>gi|82523867|emb|CAI78815.1| biopolymer transport protein [uncultured candidate division WS3
bacterium]
Length = 250
Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 107/226 (47%), Gaps = 15/226 (6%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
+F + ++ K I+ +LF FS+ SW++I+++ + R+ F Q F S +
Sbjct: 24 VFDMIIRAAAFSKIILLILFGFSVSSWAIILERWWFYKRAERRSLAFLQSFRRAASPQAF 83
Query: 73 CKSLKNHHNIGLAAIFMSAMSEWKK----SCDKGARS-PIGI-------QDRIDRMMDVA 120
++ + A IF A+ + + S D G R P+ + + R +++A
Sbjct: 84 RTAVSGGRDNPFARIFDRALKQAENGSEDSHDAGYREMPVATATERTVATESLKRTLELA 143
Query: 121 IARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA--GYYSNNVVSIPGIIES 178
E+ + L FL + S +G+LG V G+M F S+ G S VV+ PGI E+
Sbjct: 144 TTEEIAVLERYLGFLATTGSTCPFIGLLGTVWGVMSSFMSMGREGSASLAVVA-PGIAEA 202
Query: 179 LISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
LI GL +IP+ I YN ++ ++F +M+ F+ E L R
Sbjct: 203 LIVTAAGLFAAIPAVIGYNLYVNRVQRFTRRMDSFSLELLNALERN 248
>gi|297539697|ref|YP_003675466.1| MotA/TolQ/ExbB proton channel [Methylotenera sp. 301]
gi|297259044|gb|ADI30889.1| MotA/TolQ/ExbB proton channel [Methylotenera sp. 301]
Length = 247
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 104/210 (49%), Gaps = 7/210 (3%)
Query: 17 FMQMGLAVKCIITL-LFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKS 75
F+ G V + L L S+ SW +I+ KS+ +R+ F+ + Q FW+ +L +
Sbjct: 12 FITAGGPVSIGVALILLAMSVASWYLIVSKSLQAWRVRQAFKVYAQHFWNAPNLAV---A 68
Query: 76 LKNHHNIGLAAIFMSAMS--EWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLS 133
+K ++ LA++ +A++ E K+ + + + R ++ +IA E ++ LS
Sbjct: 69 MKQNNKTALASLAKNAIAAAEHHKTHVSKNSEKVAQDEFVARALNRSIAEENTKMENGLS 128
Query: 134 FLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCVSIPS 192
L S+ S VG+ G V G+ SI+ + + G + E+LI LGL V+IP+
Sbjct: 129 VLASVGSVSPFVGLFGTVWGIYHALASISQSGQATLDKVAGPVGEALIMTALGLAVAIPA 188
Query: 193 SIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
+AYN + ++ A ++E F +L+
Sbjct: 189 VLAYNALVRSNRLLAAELEDFGYTLHTLLT 218
>gi|296162470|ref|ZP_06845261.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. Ch1-1]
gi|295887283|gb|EFG67110.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. Ch1-1]
Length = 243
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 101/230 (43%), Gaps = 22/230 (9%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
M NYGLA ++ Q + I L I S++SW+VI+ K N + L+R + E
Sbjct: 1 MQNYGLA-------HVWAQGDFVTRGIALTLLIMSVMSWTVIVIKGWNVMRLKRLTKNAE 53
Query: 61 QLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRID------ 114
Q FW L K L + F++ +++ D ++ + DR+D
Sbjct: 54 QAFWHSDDLADGVKKLGAGSSTPQDNPFLALALSGQEAADHHHQTQPHLHDRMDVSDWVT 113
Query: 115 ----RMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
MD ++AR + L+ L S+ S VG+ G V G+ +I +++
Sbjct: 114 RCLKDTMDESVAR----MQSGLAILASIGSTAPFVGLFGTVWGIYHALLAIGASGQSSID 169
Query: 171 SIPGII-ESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
+ G + E+LI GL V+IP+ + YN +K ++ FA+ A
Sbjct: 170 QVAGPVGEALIMTAFGLFVAIPAVLGYNALTRANKAVVAKLSRFAHGLHA 219
>gi|58039002|ref|YP_190966.1| ExbB protein [Gluconobacter oxydans 621H]
gi|58001416|gb|AAW60310.1| ExbB protein [Gluconobacter oxydans 621H]
Length = 241
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 103/198 (52%), Gaps = 5/198 (2%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
+ S + +F+ G V+ ++T+L + S+++W++ I K++ LR + ++ E ++
Sbjct: 3 LSFSPWQMFLDAGPVVRGVMTILAMASLVTWTIFIAKTIELQRLRSRLKKSEITLEDAET 62
Query: 69 LETVCKSLKNHHNIGLA-AIFMSAMSEWKKSCD-KGARSPIGIQDRIDRMMDVAIARELE 126
L+ + + G+A A+ M+A E ++S D G R GI++RI ++ A E
Sbjct: 63 LDIGEEWTRTGSGSGIAHAMVMAAEVERQRSQDIPGDRE--GIKERIVLHLERLEAAEGR 120
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLG 185
+ L ++ + VG+ G V G+M F IA ++ ++ V PGI E+L++ LG
Sbjct: 121 RLMRGTGVLATIGATSPFVGLFGTVWGIMSSFTGIAAAHATSLAVVAPGIAEALLATALG 180
Query: 186 LCVSIPSSIAYNKFIEDS 203
L +IP+ + YN +
Sbjct: 181 LVAAIPAVVIYNHLARQT 198
>gi|24114312|ref|NP_708822.1| biopolymer transport protein ExbB [Shigella flexneri 2a str. 301]
gi|30064360|ref|NP_838531.1| biopolymer transport protein ExbB [Shigella flexneri 2a str. 2457T]
gi|24053470|gb|AAN44529.1| enterochelin transporter (uptake) [Shigella flexneri 2a str. 301]
gi|30042617|gb|AAP18341.1| enterochelin transporter (uptake) [Shigella flexneri 2a str. 2457T]
gi|281602396|gb|ADA75380.1| Biopolymer transport protein exbB [Shigella flexneri 2002017]
Length = 244
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 104/213 (48%), Gaps = 25/213 (11%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S++ ++ + VKC++ L + S+++W++ KSV F +R+ + +QL +SL
Sbjct: 9 DLSVWGMYQYADIVVKCVMIGLILASVVTWAIFFSKSVEFFNQKRRLKREQQLLAEARSL 68
Query: 70 ETV--------CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
KSL H + A +E + S +G+ GI++R ++ +
Sbjct: 69 NQANDIAADFGSKSLSLH-------LLNEAQNELELS--EGSDDNEGIKERTSFRLERRV 119
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLI 180
A ++ +L ++ + VG+ G V G+M F IA + N+ V PGI E+L+
Sbjct: 120 AAVGRQMGRGNGYLATIGAISPFVGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGIAEALL 179
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGF 213
+ +GL +IP+ + YN FA Q+ GF
Sbjct: 180 ATAIGLVAAIPAVVIYN-------VFARQIGGF 205
>gi|311105153|ref|YP_003978006.1| MotA/TolQ/ExbB proton channel family protein 1 [Achromobacter
xylosoxidans A8]
gi|310759842|gb|ADP15291.1| MotA/TolQ/ExbB proton channel family protein 1 [Achromobacter
xylosoxidans A8]
Length = 331
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 106/224 (47%), Gaps = 17/224 (7%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+ Q K + +L + S+++W +I+ K + +++R++ +F FW+ SL
Sbjct: 84 DMGFMHFIAQSDFVGKSLFIILILMSLVTWYLILVKVASNVSMRKRSADFLNKFWNASSL 143
Query: 70 ETVCKSLKNH-------HNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIA 122
E V + H H LA+ M A + K D + R M I
Sbjct: 144 EQVENEIVTHGARDPFSH---LASHAMHAQAHHNKFGATKLEEAGSNTDFVTRTMRKVID 200
Query: 123 RELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII----ES 178
E ++ L+ L S+ S VG+ G V G+ + ++ G ++ V+I I E+
Sbjct: 201 EETAKLENGLTVLASVGSTAPFVGLFGTVWGV---YHALVGIGLSDGVTINRIAGPVGEA 257
Query: 179 LISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
LI LGL V+IP+ +AYN F+ +++ F +++ FA++ A L+
Sbjct: 258 LIMTGLGLAVAIPAVLAYNTFVRNNRVFLSRLDAFAHDLFAFLT 301
>gi|313648123|gb|EFS12569.1| tonB-system energizer ExbB [Shigella flexneri 2a str. 2457T]
gi|332752681|gb|EGJ83066.1| tonB-system energizer ExbB [Shigella flexneri K-671]
gi|332753066|gb|EGJ83450.1| tonB-system energizer ExbB [Shigella flexneri 4343-70]
gi|332754574|gb|EGJ84940.1| tonB-system energizer ExbB [Shigella flexneri 2747-71]
gi|332765487|gb|EGJ95705.1| tonB-system energizer ExbB [Shigella flexneri 2930-71]
gi|333000327|gb|EGK19910.1| tonB-system energizer ExbB [Shigella flexneri K-218]
gi|333014917|gb|EGK34262.1| tonB-system energizer ExbB [Shigella flexneri K-304]
Length = 239
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 104/213 (48%), Gaps = 25/213 (11%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S++ ++ + VKC++ L + S+++W++ KSV F +R+ + +QL +SL
Sbjct: 4 DLSVWGMYQYADIVVKCVMIGLILASVVTWAIFFSKSVEFFNQKRRLKREQQLLAEARSL 63
Query: 70 ETV--------CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
KSL H + A +E + S +G+ GI++R ++ +
Sbjct: 64 NQANDIAADFGSKSLSLH-------LLNEAQNELELS--EGSDDNEGIKERTSFRLERRV 114
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLI 180
A ++ +L ++ + VG+ G V G+M F IA + N+ V PGI E+L+
Sbjct: 115 AAVGRQMGRGNGYLATIGAISPFVGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGIAEALL 174
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGF 213
+ +GL +IP+ + YN FA Q+ GF
Sbjct: 175 ATAIGLVAAIPAVVIYN-------VFARQIGGF 200
>gi|50084751|ref|YP_046261.1| putative biopolymer transport protein (ExbB-like) [Acinetobacter
sp. ADP1]
gi|49530727|emb|CAG68439.1| putative biopolymer transport protein (ExbB-like) [Acinetobacter
sp. ADP1]
Length = 244
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 100/194 (51%), Gaps = 5/194 (2%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL-ETVCKSLKNHHNIG-LA 85
I LL FS+++W +I+ K V RQ + F + FWS ++L + + KS + +A
Sbjct: 13 IWLLVAFSVVTWGLIVIKLVQTQKADRQSKAFAEEFWSAKNLQDAIQKSEAGQGPVARIA 72
Query: 86 AIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLV 145
+++ + + QD ++R + I E ++ + + L S+ + +
Sbjct: 73 NTGFKTLADADDDTHQDLQHSWSRQDLLERHLRKQILSERRQLEKGSALLASIGNNAPFI 132
Query: 146 GILGAVLGMMGFFQSIA--GYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDS 203
G+ G V G++ Q+IA G S +VV+ P I E+L++ +G+ V++P+ +AYN F+
Sbjct: 133 GLFGTVFGIIHALQAIAHSGNASMDVVAGP-IGEALVATGIGIAVAVPAVLAYNYFVRKV 191
Query: 204 KKFAMQMEGFANEF 217
K +++ FA +F
Sbjct: 192 KTIGAELDDFATDF 205
>gi|70731074|ref|YP_260815.1| tolQ protein [Pseudomonas fluorescens Pf-5]
gi|68345373|gb|AAY92979.1| tolQ protein [Pseudomonas fluorescens Pf-5]
Length = 236
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 110/224 (49%), Gaps = 3/224 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
+SI+ L L VK ++ L + S+LSW +IIQ+ ++F+ F Q F + L
Sbjct: 7 HMSIWGLISDASLLVKAVMLTLLLASLLSWYLIIQRGAVLRGREQRFQAFIQRFRAAPEL 66
Query: 70 ETVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + + + G+ IF + E+ + + G+ + ++R + VAI+ +
Sbjct: 67 LPLYREVAKGSDAEGGVEPIFAAGYQEFSHLRGQPGGAGEGVLEGVERALYVAISEQETR 126
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ + L FL ++ S +G+ G V G+M F ++ + ++ PGI E+LI+ +GL
Sbjct: 127 LEKGLQFLATVGSVSPYIGLFGTVWGIMNSFLGLSQVQQATLSTVAPGIAEALIATAIGL 186
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
+IP+ IAYN+F S+ + F NE L R +G S
Sbjct: 187 FAAIPAVIAYNRFSARSQTLLTRYYAFGNELQVRLHRTLQGTPS 230
>gi|322437192|ref|YP_004219404.1| MotA/TolQ/ExbB proton channel [Acidobacterium sp. MP5ACTX9]
gi|321164919|gb|ADW70624.1| MotA/TolQ/ExbB proton channel [Acidobacterium sp. MP5ACTX9]
Length = 248
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 111/224 (49%), Gaps = 15/224 (6%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLET 71
S+ ++ M + I+ LLFI SI S +VII +++ F R Q REF +L+T
Sbjct: 30 SLMDMWGHMSWIPRLIVMLLFIMSIWSLAVIIDRAIYFSAARSQSREFAPKV--ANALKT 87
Query: 72 --------VCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAR 123
V + K H LA + S + E++ GA S I+ R ++ + A
Sbjct: 88 GNLDAAIKVADTTKKSH---LAEVVTSGLQEFRSFGSGGAISEAQIESS-KRALERSEAI 143
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISI 182
++ L L ++ S +G+LG V+G++ FQ IA ++ + ++ GI E+L++
Sbjct: 144 VHSKLKRGLGGLATIGSTAPFIGLLGTVIGILNAFQQIATQKTSGIGAVAGGISEALVTT 203
Query: 183 LLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
GL V+IP+ +A+N F + F ++M+ ++E +Q+
Sbjct: 204 AFGLVVAIPAVMAFNYFTNKVEAFDVEMDNSSSELVDYFIKQSH 247
>gi|330809804|ref|YP_004354266.1| membrane spanning protein TolQ [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327377912|gb|AEA69262.1| putative membrane spanning protein TolQ [Pseudomonas brassicacearum
subsp. brassicacearum NFM421]
Length = 235
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 112/221 (50%), Gaps = 4/221 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
++I+ L L VK ++ L + S+LSW +IIQ+S RQ F Q F Q L
Sbjct: 7 HMTIWGLISDASLLVKAVMLTLLLASLLSWYLIIQRSAVLQRNERQLNGFMQRFRGTQDL 66
Query: 70 ETVCKSLKN--HHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + + G+ IF + + + + ++ + +P + + ++R + VAI+ + +
Sbjct: 67 LPLYREHAQVREDDGGVTPIFQAGVLAFTQ-LNQPSSTPQVVLEGVERALQVAISEQEIQ 125
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ + L FL ++ S +G+ G V G+M F ++ ++ ++ PGI E+LI+ +GL
Sbjct: 126 LEKGLQFLATVGSVSPYIGLFGTVWGIMNAFIGLSQVQQASLSTVAPGIAEALIATAIGL 185
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEG 227
+IP+ IAYN+F + + F NE A L R+ G
Sbjct: 186 FAAIPAVIAYNRFAARGQTLLTRYYAFGNELQARLHRKLHG 226
>gi|187923405|ref|YP_001895047.1| MotA/TolQ/ExbB proton channel [Burkholderia phytofirmans PsJN]
gi|187714599|gb|ACD15823.1| MotA/TolQ/ExbB proton channel [Burkholderia phytofirmans PsJN]
Length = 243
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 100/230 (43%), Gaps = 22/230 (9%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
M NYGLA ++ Q + I L I S++SWSVI+ K N + L R + E
Sbjct: 1 MQNYGLA-------HVWAQGDFVTRGIALALLIMSVMSWSVIVIKGWNVMRLNRLTKNAE 53
Query: 61 QLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRID------ 114
Q FW L K L + F++ +++ D ++ + DR+D
Sbjct: 54 QAFWHSDDLADGVKKLGAGSSTPHDNPFLALALSGQEAADHHHQTQPHLHDRMDVSDWVT 113
Query: 115 ----RMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
MD ++AR + L+ L S+ S VG+ G V G+ +I +++
Sbjct: 114 RCLKDTMDESVAR----MQSGLAILASIGSTAPFVGLFGTVWGIYHALLAIGASGQSSID 169
Query: 171 SIPGII-ESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
+ G + E+LI GL V+IP+ + YN +K ++ FA+ A
Sbjct: 170 QVAGPVGEALIMTAFGLFVAIPAVLGYNALTRANKAVVAKLSRFAHGLHA 219
>gi|3916254|gb|AAC78851.1| ExbB [Bordetella bronchiseptica]
Length = 314
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 104/224 (46%), Gaps = 17/224 (7%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+ Q K + +L + S+++W +I+ K+V + +R++ F FW+ SL
Sbjct: 73 DMGFLHFVAQSDFVGKTLFVILIVMSLVTWYLIVVKAVGNMGMRKRAAHFLNKFWNASSL 132
Query: 70 ETVCKSLKNH-------HNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIA 122
E V + H H LA+ M A K + + R M I
Sbjct: 133 EQVENEIVTHGARDPFSH---LASHAMHAQQHHAKFGATKLEESGSNGEFVSRTMRKVID 189
Query: 123 RELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII----ES 178
E ++ L+ L S+ S VG+ G V G+ + ++ G ++ V+I I E+
Sbjct: 190 EETAKLENGLTVLASVGSTAPFVGLFGTVWGV---YHALVGIGLSDGVTINRIAGPVGEA 246
Query: 179 LISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
LI LGL V+IP+ +AYN F+ +++ F +++ FA++ A L+
Sbjct: 247 LIMTGLGLAVAIPAVLAYNAFVRNNRVFLSRLDAFAHDLFAFLT 290
>gi|170694658|ref|ZP_02885810.1| MotA/TolQ/ExbB proton channel [Burkholderia graminis C4D1M]
gi|170140540|gb|EDT08716.1| MotA/TolQ/ExbB proton channel [Burkholderia graminis C4D1M]
Length = 242
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 100/230 (43%), Gaps = 22/230 (9%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
M NYGLA ++ Q + I L + S++SWSVI+ K N + L R + E
Sbjct: 1 MQNYGLA-------HVWAQGDFVTRGIALALLVMSVMSWSVIVIKGWNVMRLNRLTKNAE 53
Query: 61 QLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRID------ 114
Q FW L K L + F++ +++ D ++ + DR+D
Sbjct: 54 QAFWHSDDLADGVKKLGAGASTPQDNPFLALALSGQEAADHHHQTQPHLHDRMDVSDWVT 113
Query: 115 ----RMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
MD ++AR + L+ L S+ S VG+ G V G+ +I +++
Sbjct: 114 RCLKDTMDESVAR----MQSGLAILASIGSTAPFVGLFGTVWGIYHALLAIGASGQSSID 169
Query: 171 SIPGII-ESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
+ G + E+LI GL V+IP+ + YN +K ++ FA+ A
Sbjct: 170 QVAGPVGEALIMTAFGLFVAIPAVLGYNALTRANKAIVAKLSRFAHGLHA 219
>gi|161506270|ref|YP_001573382.1| biopolymer transport protein ExbB [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-- str. RSK2980]
gi|160867617|gb|ABX24240.1| hypothetical protein SARI_04465 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 239
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 109/223 (48%), Gaps = 4/223 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S++ ++ + VKC++ L + S+++W++ KSV F + +R+ + +Q +SL
Sbjct: 4 DLSVWGMYQHADIVVKCVMIGLILASVVTWAIFFSKSVEFFSQKRRLKHEQQQLVDARSL 63
Query: 70 ETVCKSLKNHHNIGLAAIFMS-AMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ L+A ++ A +E + S +G+ GI++R ++ +A +
Sbjct: 64 DQAADIAAGFSAKSLSAQLINEAQNELELS--QGSEDNEGIKERTGFRLERRVAAVGRYM 121
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
+L ++ + VG+ G V G+M F IA + N+ V PGI E+L++ +GL
Sbjct: 122 GRGNGYLATIGAISPFVGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGIAEALLATAIGLV 181
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
+IP+ + YN F + + A + + SR + N S
Sbjct: 182 AAIPAVVIYNIFARQIGSYKATLGDVAAQVLLLQSRDLDLNAS 224
>gi|323525501|ref|YP_004227654.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. CCGE1001]
gi|323382503|gb|ADX54594.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. CCGE1001]
Length = 242
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 100/230 (43%), Gaps = 22/230 (9%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
M NYGLA ++ Q + I L + S++SWSVI+ K N + L R + E
Sbjct: 1 MQNYGLA-------HVWAQGDFVTRGIALALLVMSVMSWSVIVIKGWNVMRLNRLTKNAE 53
Query: 61 QLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRID------ 114
Q FW L K L + F++ +++ D ++ + DR+D
Sbjct: 54 QAFWHSDDLADGVKKLGAGSSTPHDNPFLALALSGQEAADHHHQTQPHLHDRMDVSDWVT 113
Query: 115 ----RMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
MD ++AR + L+ L S+ S VG+ G V G+ +I +++
Sbjct: 114 RCLKDTMDESVAR----MQSGLAILASIGSTAPFVGLFGTVWGIYHALLAIGASGQSSID 169
Query: 171 SIPGII-ESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
+ G + E+LI GL V+IP+ + YN +K ++ FA+ A
Sbjct: 170 QVAGPVGEALIMTAFGLFVAIPAVLGYNALTRANKAIVAKLSRFAHGLHA 219
>gi|157148574|ref|YP_001455893.1| biopolymer transport protein ExbB [Citrobacter koseri ATCC BAA-895]
gi|157085779|gb|ABV15457.1| hypothetical protein CKO_04401 [Citrobacter koseri ATCC BAA-895]
Length = 239
Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 109/230 (47%), Gaps = 18/230 (7%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S++ ++ + VKC++ L + S+++W++ KS+ F T +R+ + +Q +SL
Sbjct: 4 DLSVWGMYQHADIVVKCVMIGLILASVVTWAIFFSKSLEFFTQKRRLKREQQQLAEARSL 63
Query: 70 ET--------VCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
+ KSL + + A +E + S +G+ GI++R ++ +
Sbjct: 64 DQASNIASAFAAKSLSSQ-------LLYEAQNELELS--EGSEDNEGIKERTGFRLERRV 114
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLI 180
A + +L ++ + VG+ G V G+M F IA + N+ V PGI E+L+
Sbjct: 115 AAVGRHMGRGNGYLATIGAISPFVGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGIAEALL 174
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
+ +GL +IP+ + YN F + + A + + SR + N S
Sbjct: 175 ATAIGLVAAIPAVVIYNIFARQIGSYKATLGDVAAQILLLQSRDLDLNAS 224
>gi|295690488|ref|YP_003594181.1| MotA/TolQ/Exbb proton channel [Caulobacter segnis ATCC 21756]
gi|295432391|gb|ADG11563.1| MotA/TolQ/ExbB proton channel [Caulobacter segnis ATCC 21756]
Length = 297
Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 104/218 (47%), Gaps = 7/218 (3%)
Query: 16 LFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCK- 74
+F+ G VK ++ L + S+ SW +++ K F L +Q +F + F +S+ + +
Sbjct: 77 MFLAAGAVVKVVMIGLILASVFSWVLLLTKIFEFAGLNKQSDKFLEAFRGARSIADIARI 136
Query: 75 -SLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLS 133
S + +A + +A E + S G + +D AI + ++LS
Sbjct: 137 SSSEEFEGNPMADMAAAASQEVELSRQAGLQVAGEHRDSTLARATYAINAVQASLAKRLS 196
Query: 134 ----FLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCV 188
FL S+ SAG +G+ G V G+M F IA + N+ V PGI E+L++ +GL
Sbjct: 197 GGMVFLASVGSAGPFIGLFGTVYGIMTSFIGIANTNTTNLAVVAPGIAEALLATGIGLFA 256
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ I YN F + + EGF E +SRQ +
Sbjct: 257 AIPAVIFYNYFQTRISGYGTRSEGFVAELMNAISRQLD 294
>gi|116748198|ref|YP_844885.1| MotA/TolQ/ExbB proton channel [Syntrophobacter fumaroxidans MPOB]
gi|116697262|gb|ABK16450.1| MotA/TolQ/ExbB proton channel [Syntrophobacter fumaroxidans MPOB]
Length = 268
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 99/221 (44%), Gaps = 13/221 (5%)
Query: 14 FALFMQMGLAVKCIITLLFIFSILSWSVII----------QKSVNFITLRRQFREFEQLF 63
F + G VK I+ L + SI W +I+ ++S F+ RQ + + L+
Sbjct: 28 FDMVRNAGPMVKFIMVSLVVLSIACWCIILLKARLVRRAQKESELFVNYFRQRKNYSTLY 87
Query: 64 WSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAR 123
+ L+ L IG A + S K+ + + +P + + +DR + I
Sbjct: 88 RESEPLDE--SHLAQIFRIGYAELNRLGKSLETKNLQELSTNPEVVLENVDRAIRGGIMA 145
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISI 182
E + L L + S +G+ G V G+M F I S N+ V PGI E+L++
Sbjct: 146 ERQRFESFLPLLATTGSTAPFIGLFGTVWGIMTSFHEIGLKGSANLAVVAPGISEALVAT 205
Query: 183 LLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
+GL +IP+ +AYN F K ++M FA +F IL R
Sbjct: 206 AMGLAAAIPAVVAYNHFANRIKMIEIEMSHFAADFLNILKR 246
>gi|220921396|ref|YP_002496697.1| MotA/TolQ/ExbB proton channel [Methylobacterium nodulans ORS 2060]
gi|219946002|gb|ACL56394.1| MotA/TolQ/ExbB proton channel [Methylobacterium nodulans ORS 2060]
Length = 228
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 101/200 (50%), Gaps = 10/200 (5%)
Query: 7 AIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG 66
A D+S LF+Q VK ++ LL + S+ W+VII+K++ + RRQ + F ++ +G
Sbjct: 9 AAHDMSFLGLFLQADPIVKGVMILLILASVACWTVIIEKTIRLASARRQAKVFARMVATG 68
Query: 67 QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
LE + A I +A W+ + ++RI+R M A+ +L+
Sbjct: 69 GGLEEGRGGIA-------ARIVAAAQEAWRD--QDPTETRAERRERIERAMRAALTLDLK 119
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLG 185
+ L L + SA VG+ G V G+M F SIA ++ V PGI E+L + +G
Sbjct: 120 RLQLGLPLLATSGSAAPFVGLFGTVWGIMNSFSSIAKSQDTSLAVVAPGIAEALFATAIG 179
Query: 186 LCVSIPSSIAYNKFIEDSKK 205
L V+IP+ +AYNK D K
Sbjct: 180 LVVAIPAVVAYNKLSGDLGK 199
>gi|33600966|ref|NP_888526.1| MotA/TolQ/ExbB proton channel family protein [Bordetella
bronchiseptica RB50]
gi|33575401|emb|CAE32478.1| MotA/TolQ/ExbB proton channel family protein [Bordetella
bronchiseptica RB50]
Length = 325
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 104/224 (46%), Gaps = 17/224 (7%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+ Q K + +L + S+++W +I+ K+V + +R++ F FW+ SL
Sbjct: 84 DMGFLHFVAQSDFVGKTLFIILIVMSLVTWYLIVVKAVGNMGMRKRAAHFLNKFWNASSL 143
Query: 70 ETVCKSLKNH-------HNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIA 122
E V + H H LA+ M A K + + R M I
Sbjct: 144 EQVENEIVTHGARDPFSH---LASHAMHAQQHHAKFGATKLEESGSNGEFVSRTMRKVID 200
Query: 123 RELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII----ES 178
E ++ L+ L S+ S VG+ G V G+ + ++ G ++ V+I I E+
Sbjct: 201 EETAKLENGLTVLASVGSTAPFVGLFGTVWGV---YHALVGIGLSDGVTINRIAGPVGEA 257
Query: 179 LISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
LI LGL V+IP+ +AYN F+ +++ F +++ FA++ A L+
Sbjct: 258 LIMTGLGLAVAIPAVLAYNAFVRNNRVFLSRLDAFAHDLFAFLT 301
>gi|33597122|ref|NP_884765.1| MotA/TolQ/ExbB proton channel family protein [Bordetella
parapertussis 12822]
gi|33566573|emb|CAE37830.1| MotA/TolQ/ExbB proton channel family protein [Bordetella
parapertussis]
Length = 325
Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 104/224 (46%), Gaps = 17/224 (7%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+ Q K + +L + S+++W +I+ K+V + +R++ F FW+ SL
Sbjct: 84 DMGFLHFVAQSDFVGKTLFIILIVMSLVTWYLIVVKAVGNMGMRKRAAHFLNKFWNASSL 143
Query: 70 ETVCKSLKNH-------HNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIA 122
E V + H H LA+ M A K + + R M I
Sbjct: 144 EQVENEIVTHGARDPFSH---LASHAMHAQQHHAKFGATKLEESGSNGEFVSRTMRKVID 200
Query: 123 RELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII----ES 178
E ++ L+ L S+ S VG+ G V G+ + ++ G ++ V+I I E+
Sbjct: 201 EETAKLENGLTVLASVGSTAPFVGLFGTVWGV---YHALVGIGLSDGVTINRIAGPVGEA 257
Query: 179 LISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
LI LGL V+IP+ +AYN F+ +++ F +++ FA++ A L+
Sbjct: 258 LIMTGLGLAVAIPAVLAYNAFVRNNRVFLSRLDAFAHDLFAFLT 301
>gi|332704877|ref|ZP_08424965.1| MotA/TolQ/ExbB proton channel [Desulfovibrio africanus str. Walvis
Bay]
gi|332555026|gb|EGJ52070.1| MotA/TolQ/ExbB proton channel [Desulfovibrio africanus str. Walvis
Bay]
Length = 229
Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 108/206 (52%), Gaps = 11/206 (5%)
Query: 28 ITLLFIF---SILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGL 84
+T+LF+ S+ SW VII K + ++ ++ F + + + +L + L
Sbjct: 17 LTVLFVLVLMSLGSWYVIIFKLMTLNRAKKAILAEQRAFQDARDMASAMHALGKDSSSSL 76
Query: 85 AAIFMSAMSEWKKSCDKGARSPIGIQ-----DRIDRMMDVAIARELEEITEKLSFLGSMS 139
I +A+ E K+ + +++ + ++ D + R + A+A E+ + ++SFLG+ +
Sbjct: 77 YRIAHNAVRELKRI--EASKTEVKVKARLAKDNMRRALRQAVASEMSAMDSQMSFLGTCA 134
Query: 140 SAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCVSIPSSIAYNK 198
+A +G+LG V G++ FQSIA S + ++ PG+ E+LI+ GL V+IPS+IAYN
Sbjct: 135 NATPYIGLLGTVWGIIVAFQSIATLKSAAISAVAPGMAEALIATAFGLAVAIPSTIAYNA 194
Query: 199 FIEDSKKFAMQMEGFANEFSAILSRQ 224
K ++ FA F + R+
Sbjct: 195 IQGLLSKIETELVNFAGIFLNRIQRE 220
>gi|167565058|ref|ZP_02357974.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Burkholderia oklahomensis EO147]
Length = 243
Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 99/230 (43%), Gaps = 22/230 (9%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
M +YG+A ++ Q + I L + SILSW VI+ K N I L+R ++ E
Sbjct: 1 MQSYGIA-------HVWAQGDFVTRAIAIALLVMSILSWMVIVIKGWNVIRLKRLSKDAE 53
Query: 61 QLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRID------ 114
Q FW E K L + + F++ +++ D ++ + DR+D
Sbjct: 54 QSFWHSDDFEEGVKKLGSTSSSTQDNPFLALALSGQEAADHHHQTQPHLHDRMDVSDWVT 113
Query: 115 ----RMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
MD IAR + L+ L S+ S VG+ G V G+ I ++
Sbjct: 114 RCLKDTMDEGIAR----MQGGLAILASIGSTAPFVGLFGTVWGIYHALLVIGATGQTSID 169
Query: 171 SIPGII-ESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
+ G + ESLI GL V+IP+ + YN +K ++ FA+ A
Sbjct: 170 QVAGPVGESLIMTAFGLFVAIPAVLGYNALTRANKSIVSRLRRFAHGLHA 219
>gi|167572230|ref|ZP_02365104.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Burkholderia oklahomensis C6786]
Length = 243
Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 99/230 (43%), Gaps = 22/230 (9%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
M +YG+A ++ Q + I L + SILSW VI+ K N I L+R ++ E
Sbjct: 1 MQSYGIA-------HVWAQGDFVTRAIAIALLVMSILSWMVIVIKGWNVIRLKRLSKDAE 53
Query: 61 QLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRID------ 114
Q FW E K L + + F++ +++ D ++ + DR+D
Sbjct: 54 QSFWHSDDFEEGVKKLGSASSSTQDNPFLALALSGQEAADHHHQTQPHLHDRMDVSDWVT 113
Query: 115 ----RMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
MD IAR + L+ L S+ S VG+ G V G+ I ++
Sbjct: 114 RCLKDTMDEGIAR----MQGGLAILASIGSTAPFVGLFGTVWGIYHALLVIGATGQTSID 169
Query: 171 SIPGII-ESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
+ G + ESLI GL V+IP+ + YN +K ++ FA+ A
Sbjct: 170 QVAGPVGESLIMTAFGLFVAIPAVLGYNALTRANKSIVSRLRRFAHGLHA 219
>gi|226944276|ref|YP_002799349.1| ExbB proton channel [Azotobacter vinelandii DJ]
gi|226719203|gb|ACO78374.1| ExbB proton channel [Azotobacter vinelandii DJ]
Length = 236
Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 102/202 (50%), Gaps = 5/202 (2%)
Query: 25 KCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNI-- 82
+I +L FS+L+W + + K++ F L + R + FW SL++ + ++ +
Sbjct: 13 HVVIWVLIGFSVLTWGLALIKTIQFARLGYRDRRLLKHFWQAPSLDSAAELVQRQASAVA 72
Query: 83 GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAG 142
+A +A+ E D I QDR++R + I RE + L+ + S+ S
Sbjct: 73 HVAQAGFAAIREEPGQHDLA--HSINHQDRLERALRQQIQRERRSLESGLAVVASIGSTS 130
Query: 143 LLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCVSIPSSIAYNKFIE 201
+G+ G V G+M + I+ S ++ ++ G I +L++ +G+ V++P+ + YN F+
Sbjct: 131 PFIGLFGTVWGIMEALKGISAAGSASLETVAGPIGAALVATGVGIAVAVPAVLVYNYFLR 190
Query: 202 DSKKFAMQMEGFANEFSAILSR 223
K A ++ FA++F ++ +
Sbjct: 191 RLKLTAADLDDFAHDFYSLAQK 212
>gi|167838895|ref|ZP_02465672.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Burkholderia thailandensis MSMB43]
Length = 243
Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 98/230 (42%), Gaps = 22/230 (9%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
M +YG+A ++ Q + I L + S+LSW VI+ K N I L+R ++ E
Sbjct: 1 MQSYGIA-------HVWAQGDFVTRSIAVALLVMSVLSWMVIVIKGWNVIRLKRLSKDAE 53
Query: 61 QLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRID------ 114
Q FW + K L + F++ K++ D ++ + DR+D
Sbjct: 54 QSFWHSDDFDEGVKKLGRASSSAQDNPFLALALSGKEASDHHHQTQPHLHDRMDVSDWVT 113
Query: 115 ----RMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
MD IAR + L+ L S+ S VG+ G V G+ I ++
Sbjct: 114 RCLKDTMDEGIAR----MQGGLAILASIGSTAPFVGLFGTVWGIYHALLVIGATGQTSID 169
Query: 171 SIPGII-ESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
+ G + ESLI GL V+IP+ + YN +K ++ FA+ A
Sbjct: 170 QVAGPVGESLIMTAFGLFVAIPAVLGYNALTRANKSIVSRLRRFAHGLHA 219
>gi|226942954|ref|YP_002798027.1| ExbB proton channel [Azotobacter vinelandii DJ]
gi|226944266|ref|YP_002799339.1| ExbB proton channel [Azotobacter vinelandii DJ]
gi|226717881|gb|ACO77052.1| ExbB proton channel [Azotobacter vinelandii DJ]
gi|226719193|gb|ACO78364.1| ExbB proton channel [Azotobacter vinelandii DJ]
Length = 236
Score = 79.0 bits (193), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 101/202 (50%), Gaps = 5/202 (2%)
Query: 25 KCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNI-- 82
+I +L FS+L+W + + K++ F L + R + FW SL++ + ++
Sbjct: 13 HVVIWVLIGFSVLTWGLALIKAIQFARLGYRDRRLLKHFWQAPSLDSAAELVQRQAGAVA 72
Query: 83 GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAG 142
+A +A+ E D I QDR++R + I RE + L+ + S+ S
Sbjct: 73 HVAQAGFAAIREEPGQHDLA--HSINHQDRLERALRQQIQRERRSLESGLAVVASIGSTS 130
Query: 143 LLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCVSIPSSIAYNKFIE 201
+G+ G V G+M + I+ S ++ ++ G I +L++ +G+ V++P+ + YN F+
Sbjct: 131 PFIGLFGTVWGIMEALKGISAAGSASLETVAGPIGAALVATGVGIAVAVPAVLVYNYFLR 190
Query: 202 DSKKFAMQMEGFANEFSAILSR 223
K A ++ FA++F ++ +
Sbjct: 191 RLKLTAADLDDFAHDFYSLAQK 212
>gi|288550403|ref|ZP_05970300.2| TonB-system energizer ExbB [Enterobacter cancerogenus ATCC 35316]
gi|288315079|gb|EFC54017.1| TonB-system energizer ExbB [Enterobacter cancerogenus ATCC 35316]
Length = 238
Score = 79.0 bits (193), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 99/192 (51%), Gaps = 4/192 (2%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S++ ++ + VK ++ L + S+++W++ KSV I+ +R+ + +Q +SL
Sbjct: 4 DLSVWGMYHHADIVVKIVMIGLILASVVTWAIFFSKSVELISQKRRLKREQQQLAEARSL 63
Query: 70 ETVCKSLKNHHNIGLAAIFMS-AMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ + H L ++ ++ A +E + S G+ GI++R ++ +A +
Sbjct: 64 DQASDMTSSFHAKSLTSLLVNEAQNELELSA--GSEDNEGIKERTGFRLERRVAAVGRHM 121
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
+L ++ + VG+ G V G+M F IA + N+ V PGI E+L++ +GL
Sbjct: 122 GRGNGYLATIGAISPFVGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGIAEALLATAIGLV 181
Query: 188 VSIPSSIAYNKF 199
+IP+ + YN F
Sbjct: 182 AAIPAVVIYNIF 193
>gi|303246912|ref|ZP_07333188.1| MotA/TolQ/ExbB proton channel [Desulfovibrio fructosovorans JJ]
gi|302491619|gb|EFL51502.1| MotA/TolQ/ExbB proton channel [Desulfovibrio fructosovorans JJ]
Length = 246
Score = 78.6 bits (192), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 105/221 (47%), Gaps = 22/221 (9%)
Query: 20 MGLAVKCIITLLFIFSILS------WSVIIQKSVNFITLRRQFREFEQ---LFWSGQSLE 70
+G+ T+LF+ S+L+ WS+I+ V TL R RE + F +L
Sbjct: 11 LGMLSNATPTVLFVLSVLAAMSVGCWSIIL---VKIFTLTRAKREAARDYVRFQKADTLR 67
Query: 71 TVCKSL------KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARE 124
T + L + H LA + M + D+ R + D I R++ + E
Sbjct: 68 TAMRELGESRASPSFHVGRLAFAELVRMEDAPMQPDEKGRVAM---DNIRRVLRQGVTEE 124
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISIL 183
L +++ L FL + ++A +G+ G V G+M F SI S + ++ PGI E+LI+
Sbjct: 125 LGNLSKTLPFLATCANATPFIGLFGTVWGIMNSFHSIGLMQSAALAAVAPGISEALIATA 184
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+GL V+IP+ IAYN F+ + ++ FA F + R+
Sbjct: 185 IGLAVAIPAVIAYNFFLGYMQTIERELVNFAGAFLNRIQRE 225
>gi|134296384|ref|YP_001120119.1| MotA/TolQ/ExbB proton channel [Burkholderia vietnamiensis G4]
gi|134139541|gb|ABO55284.1| outer membrane transport energization protein ExbB [Burkholderia
vietnamiensis G4]
Length = 243
Score = 78.6 bits (192), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 97/226 (42%), Gaps = 14/226 (6%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
M +YG+A ++ Q + I L + S+LSW VI+ K N I L R + E
Sbjct: 1 MQSYGIA-------HVWAQGDFVTRAIAITLLVMSVLSWIVIVVKGWNVIRLNRLTKNAE 53
Query: 61 QLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRID------ 114
Q FW + K L + F++ K++ D ++ + DR+D
Sbjct: 54 QAFWHSDDFDDGIKKLGLTASTPGDNPFLALALSGKEAADHHHQTQPHLHDRMDVSDWVT 113
Query: 115 RMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG 174
R + + + + L+ L S+ S VG+ G V G+ +I ++ + G
Sbjct: 114 RCLKDTMDEGISRMQAGLAILASIGSTAPFVGLFGTVWGIYHALLAIGATGQTSIDQVAG 173
Query: 175 II-ESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
+ ESLI GL V+IP+ + YN +K A ++ FA+ A
Sbjct: 174 PVGESLIMTAFGLFVAIPAVLGYNALTRANKGIASKLRRFAHGLHA 219
>gi|146341553|ref|YP_001206601.1| biopolymer transport protein ExbB [Bradyrhizobium sp. ORS278]
gi|146194359|emb|CAL78383.1| biopolymer transport protein ExbB; uptake of enterobactin,
tonB-dependent uptake of B colicins [Bradyrhizobium sp.
ORS278]
Length = 302
Score = 78.6 bits (192), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 100/202 (49%), Gaps = 8/202 (3%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
++S +F++ + VK ++ L + S+ SW+++I KS+ F LRR+ + S +SL
Sbjct: 72 ELSPLGMFLKADIVVKAVMIALALASVASWTILIAKSIEFSVLRRRLIGALRKLTSAKSL 131
Query: 70 E----TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
V + NI A + +A++E + S G S GI++R + E
Sbjct: 132 AEAQLAVGQGKDRSGNIA-AVLLQAAITEARLSA--GLNSDEGIKERAASSFSEIVRAEA 188
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILL 184
+ + L ++ + VG+ G V G+M F I+ + N+ V PGI E+L++ +
Sbjct: 189 RRVRVGMGLLATVGAISPFVGLFGTVWGIMNSFIGISKSQTTNLAVVAPGIAEALLATAI 248
Query: 185 GLCVSIPSSIAYNKFIEDSKKF 206
GL +IP+ I YN F +K +
Sbjct: 249 GLAAAIPAVIIYNHFSRVTKGY 270
>gi|168819784|ref|ZP_02831784.1| TonB-system energizer ExbB [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|205343445|gb|EDZ30209.1| TonB-system energizer ExbB [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
Length = 244
Score = 78.6 bits (192), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 114/228 (50%), Gaps = 14/228 (6%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S++ ++ + VKC++ L + S+++W++ KSV F T +R+ + EQL L
Sbjct: 9 DLSVWGMYQHADIVVKCVMIGLILASVVTWAIFFSKSVEFFTQKRRLKR-EQL-----QL 62
Query: 70 ETVCKSLKNHHNI--GLAAIFMSA--MSEWKKSCD--KGARSPIGIQDRIDRMMDVAIAR 123
V +SL +I G +A +SA ++E + + +G+ GI++R ++ +A
Sbjct: 63 ADV-RSLDQASDIAAGFSAKSLSAQLINEAQNELELSQGSEDNEGIKERTGFRLERRVAA 121
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISI 182
+ +L ++ + VG+ G V G+M F IA + N+ V PGI E+L++
Sbjct: 122 AGRYMGRGNGYLATIGAISPFVGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGIAEALLAT 181
Query: 183 LLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
+GL +IP+ + YN F + + A + + SR + N S
Sbjct: 182 AIGLVAAIPAVVIYNIFARQIGSYKATLGDVAAQVLLLQSRDLDLNAS 229
>gi|237745916|ref|ZP_04576396.1| MotA/TolQ/ExbB proton channel family protein [Oxalobacter
formigenes HOxBLS]
gi|229377267|gb|EEO27358.1| MotA/TolQ/ExbB proton channel family protein [Oxalobacter
formigenes HOxBLS]
Length = 251
Score = 78.6 bits (192), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 103/206 (50%), Gaps = 11/206 (5%)
Query: 25 KCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGL 84
K I+ +L S++SW++II K + +R +EF Q FW+ SL+TV ++ H G+
Sbjct: 22 KTILAILIGMSVVSWTLIIVKGIAGWRRKRHSKEFLQFFWNATSLDTVRHEIQTH---GI 78
Query: 85 AAIF--MSAMSEWKK--SCDKGAR--SPIG-IQDRIDRMMDVAIARELEEITEKLSFLGS 137
F ++A ++ K GA S G +Q+ + R M + + + + L+ L +
Sbjct: 79 KCPFSHLTAHAQHAKEHHVHYGAAKLSEAGTMQEFVTRTMRMVMDEDAARLENGLTVLAT 138
Query: 138 MSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCVSIPSSIAY 196
+ S +G+ G V G+ +I+ + + + G + E+LI +GL V+IP+ I Y
Sbjct: 139 IGSTAPFIGLFGTVWGIYNALINISASGAGTLDMVAGPVGEALIMTGIGLAVAIPAVIGY 198
Query: 197 NKFIEDSKKFAMQMEGFANEFSAILS 222
N + + +++ FANE L+
Sbjct: 199 NWLVRSNNVMMSKLDTFANELLTFLT 224
>gi|320087608|emb|CBY97372.1| Biopolymer transport protein exbB [Salmonella enterica subsp.
enterica serovar Weltevreden str. 2007-60-3289-1]
Length = 239
Score = 78.6 bits (192), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 114/228 (50%), Gaps = 14/228 (6%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S++ ++ + VKC++ L + S+++W++ KSV F T +R+ + EQL L
Sbjct: 4 DLSVWGMYQHADIVVKCVMIGLILASVVTWAIFFSKSVEFFTQKRRLKR-EQL-----QL 57
Query: 70 ETVCKSLKNHHNI--GLAAIFMSA--MSEWKKSCD--KGARSPIGIQDRIDRMMDVAIAR 123
V +SL +I G +A +SA ++E + + +G+ GI++R ++ +A
Sbjct: 58 ADV-RSLDQASDIAAGFSAKSLSAQLINEAQNELELSQGSEDNEGIKERTGFRLERRVAA 116
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISI 182
+ +L ++ + VG+ G V G+M F IA + N+ V PGI E+L++
Sbjct: 117 AGRYMGRGNGYLATIGAISPFVGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGIAEALLAT 176
Query: 183 LLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
+GL +IP+ + YN F + + A + + SR + N S
Sbjct: 177 AIGLVAAIPAVVIYNIFARQIGSYKATLGDVAAQVLLLQSRDLDLNAS 224
>gi|320539417|ref|ZP_08039086.1| membrane spanning protein in TonB-ExbB-ExbD complex [Serratia
symbiotica str. Tucson]
gi|320030542|gb|EFW12552.1| membrane spanning protein in TonB-ExbB-ExbD complex [Serratia
symbiotica str. Tucson]
Length = 304
Score = 78.6 bits (192), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 105/220 (47%), Gaps = 4/220 (1%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
MD+S++ ++ + VK ++ L + SI++W+++ K +R+ + L S
Sbjct: 68 MDLSVWGMYQHADIVVKVVMIGLVLASIVTWTILFAKGSELFCAKRRLLREQWLLAEVHS 127
Query: 69 LETVCKSLKNHHNIGLAAIFMS-AMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
L+ K ++ ++A+ ++ A +E S S GI++R ++ +A +
Sbjct: 128 LDEASKLAQSFSEQSISAVLLNDAQNELALSAKSNDNS--GIKERTGFRLERRVAAYSRD 185
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
+ FL ++ + +G+ G V G+M F IA + N+ V PGI E+L++ LGL
Sbjct: 186 MARGSGFLATIGAISPFIGLFGTVWGIMNSFIGIAHSQTTNLAVVAPGIAEALLATALGL 245
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
C +IP+ + YN F Q+ A + + SR +
Sbjct: 246 CAAIPAVVIYNIFARVISSHRAQVSDVAAQVMLLQSRDLD 285
>gi|238909959|ref|ZP_04653796.1| biopolymer transport protein ExbB [Salmonella enterica subsp.
enterica serovar Tennessee str. CDC07-0191]
Length = 244
Score = 78.6 bits (192), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 108/223 (48%), Gaps = 4/223 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S++ ++ + VKC++ L + S+++W++ KSV F T +R+ + + +SL
Sbjct: 9 DLSVWGMYQHADIVVKCVMIGLILASVVTWAIFFSKSVEFFTQKRRLKREQLQLADARSL 68
Query: 70 ETVCKSLKNHHNIGLAAIFMS-AMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ L+A ++ A +E + S +G+ GI++R ++ +A +
Sbjct: 69 DQASDIATGFSAKSLSAQLINEAQNELELS--QGSEDNEGIKERTGFRLERRVAAVGRYM 126
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
+L ++ + VG+ G V G+M F IA + N+ V PGI E+L++ +GL
Sbjct: 127 GRGNGYLATIGAISPFVGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGIAEALLATAIGLV 186
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
+IP+ + YN F + + A + + SR + N S
Sbjct: 187 AAIPAVVIYNIFARQIGSYKATLGDVAAQVLLLQSRDLDLNAS 229
>gi|50123219|ref|YP_052386.1| putative biopolymer transport protein [Pectobacterium atrosepticum
SCRI1043]
gi|49613745|emb|CAG77196.1| putative biopolymer transport protein [Pectobacterium atrosepticum
SCRI1043]
Length = 240
Score = 78.2 bits (191), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 107/220 (48%), Gaps = 17/220 (7%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS-- 65
+M + LF G +I LL +FS+++W + + K V + +R+ R F FW
Sbjct: 2 VMTLGHIELFSAEG----AVILLLLLFSLVTWGLGLLKLVQYGRAQRRDRHFRAAFWQQD 57
Query: 66 --GQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAR 123
Q+ ET K + N+ LAA+ + + + I + DR++R + I R
Sbjct: 58 DVSQTPETSAKQPGSLANLALAAVKAPERISGQLALN------IHLPDRVERALQQQIQR 111
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLIS 181
E + L+ L S+ S +G+ G V G+M Q I +G S + V+ P I +LI+
Sbjct: 112 ERRSLEGGLAVLASIGSTSPFIGLFGTVWGIMAALQEIGLSGSASLDTVAGP-IGNALIA 170
Query: 182 ILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+G+ V++P+ + YN F+ K M+ FA++ +++
Sbjct: 171 TGVGIAVAVPAVLIYNYFLRRLKLAVADMDDFAHDVYSVM 210
>gi|16761935|ref|NP_457552.1| biopolymer transport protein ExbB [Salmonella enterica subsp.
enterica serovar Typhi str. CT18]
gi|16766459|ref|NP_462074.1| biopolymer transport protein ExbB [Salmonella enterica subsp.
enterica serovar Typhimurium str. LT2]
gi|29143422|ref|NP_806764.1| biopolymer transport protein ExbB [Salmonella enterica subsp.
enterica serovar Typhi str. Ty2]
gi|161616141|ref|YP_001590106.1| biopolymer transport protein ExbB [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|167551932|ref|ZP_02345685.1| tonB-system energizer ExbB [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
gi|167990296|ref|ZP_02571396.1| tonB-system energizer ExbB [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|168231752|ref|ZP_02656810.1| tonB-system energizer ExbB [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
gi|168238112|ref|ZP_02663170.1| tonB-system energizer ExbB [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
gi|168242979|ref|ZP_02667911.1| tonB-system energizer ExbB [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
gi|168262888|ref|ZP_02684861.1| tonB-system energizer ExbB [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|168463637|ref|ZP_02697554.1| tonB-system energizer ExbB [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|194451250|ref|YP_002047155.1| biopolymer transport protein ExbB [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|194470700|ref|ZP_03076684.1| tonB-system energizer ExbB [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|194733979|ref|YP_002116115.1| biopolymer transport protein ExbB [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. CVM19633]
gi|197249773|ref|YP_002148081.1| biopolymer transport protein ExbB [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
gi|197266007|ref|ZP_03166081.1| tonB-system energizer ExbB [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|198244982|ref|YP_002217137.1| biopolymer transport protein ExbB [Salmonella enterica subsp.
enterica serovar Dublin str. CT_02021853]
gi|200387183|ref|ZP_03213795.1| tonB-system energizer ExbB [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|204927984|ref|ZP_03219184.1| tonB-system energizer ExbB [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
gi|205354076|ref|YP_002227877.1| biopolymer transport protein ExbB [Salmonella enterica subsp.
enterica serovar Gallinarum str. 287/91]
gi|207858418|ref|YP_002245069.1| biopolymer transport protein ExbB [Salmonella enterica subsp.
enterica serovar Enteritidis str. P125109]
gi|213028805|ref|ZP_03343252.1| biopolymer transport protein ExbB [Salmonella enterica subsp.
enterica serovar Typhi str. 404ty]
gi|213161298|ref|ZP_03347008.1| biopolymer transport protein ExbB [Salmonella enterica subsp.
enterica serovar Typhi str. E00-7866]
gi|213424365|ref|ZP_03357189.1| biopolymer transport protein ExbB [Salmonella enterica subsp.
enterica serovar Typhi str. E02-1180]
gi|213647425|ref|ZP_03377478.1| biopolymer transport protein ExbB [Salmonella enterica subsp.
enterica serovar Typhi str. J185]
gi|213851960|ref|ZP_03381492.1| biopolymer transport protein ExbB [Salmonella enterica subsp.
enterica serovar Typhi str. M223]
gi|289825772|ref|ZP_06544940.1| biopolymer transport protein ExbB [Salmonella enterica subsp.
enterica serovar Typhi str. E98-3139]
gi|60392257|sp|P0A1H7|EXBB_SALTY RecName: Full=Biopolymer transport protein exbB
gi|60392258|sp|P0A1H8|EXBB_SALTI RecName: Full=Biopolymer transport protein exbB
gi|25301393|pir||AF0886 biopolymer transport ExbB protein STY3332 [imported] - Salmonella
enterica subsp. enterica serovar Typhi (strain CT18)
gi|16421714|gb|AAL22033.1| uptake of enterochelin [Salmonella enterica subsp. enterica serovar
Typhimurium str. LT2]
gi|16504237|emb|CAD02990.1| biopolymer transport ExbB protein [Salmonella enterica subsp.
enterica serovar Typhi]
gi|29139056|gb|AAO70624.1| biopolymer transport ExbB protein [Salmonella enterica subsp.
enterica serovar Typhi str. Ty2]
gi|161365505|gb|ABX69273.1| hypothetical protein SPAB_03943 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194409554|gb|ACF69773.1| tonB-system energizer ExbB [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|194457064|gb|EDX45903.1| tonB-system energizer ExbB [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|194709481|gb|ACF88702.1| TonB-system energizer ExbB [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|195633697|gb|EDX52111.1| tonB-system energizer ExbB [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|197213476|gb|ACH50873.1| tonB-system energizer ExbB [Salmonella enterica subsp. enterica
serovar Agona str. SL483]
gi|197244262|gb|EDY26882.1| tonB-system energizer ExbB [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|197289035|gb|EDY28406.1| tonB-system energizer ExbB [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
gi|197939498|gb|ACH76831.1| tonB-system energizer ExbB [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|199604281|gb|EDZ02826.1| tonB-system energizer ExbB [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|204322306|gb|EDZ07503.1| tonB-system energizer ExbB [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
gi|205273857|emb|CAR38857.1| biopolymer transport ExbB protein [Salmonella enterica subsp.
enterica serovar Gallinarum str. 287/91]
gi|205323313|gb|EDZ11152.1| tonB-system energizer ExbB [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
gi|205331187|gb|EDZ17951.1| tonB-system energizer ExbB [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|205333747|gb|EDZ20511.1| tonB-system energizer ExbB [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
gi|205337928|gb|EDZ24692.1| tonB-system energizer ExbB [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
gi|205348481|gb|EDZ35112.1| tonB-system energizer ExbB [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|206710221|emb|CAR34578.1| biopolymer transport ExbB protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. P125109]
gi|261248289|emb|CBG26126.1| biopolymer transport ExbB protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. D23580]
gi|267995343|gb|ACY90228.1| biopolymer transport protein ExbB [Salmonella enterica subsp.
enterica serovar Typhimurium str. 14028S]
gi|301159713|emb|CBW19232.1| biopolymer transport ExbB protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. SL1344]
gi|312914183|dbj|BAJ38157.1| biopolymer transport protein ExbB [Salmonella enterica subsp.
enterica serovar Typhimurium str. T000240]
gi|321225836|gb|EFX50890.1| MotA/TolQ/ExbB proton channel family protein [Salmonella enterica
subsp. enterica serovar Typhimurium str. TN061786]
gi|322613561|gb|EFY10502.1| biopolymer transport protein ExbB [Salmonella enterica subsp.
enterica serovar Montevideo str. 315996572]
gi|322621153|gb|EFY18011.1| biopolymer transport protein ExbB [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-1]
gi|322624216|gb|EFY21050.1| biopolymer transport protein ExbB [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-3]
gi|322628045|gb|EFY24834.1| biopolymer transport protein ExbB [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-4]
gi|322633164|gb|EFY29906.1| biopolymer transport protein ExbB [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-1]
gi|322636259|gb|EFY32967.1| biopolymer transport protein ExbB [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-2]
gi|322639377|gb|EFY36066.1| biopolymer transport protein ExbB [Salmonella enterica subsp.
enterica serovar Montevideo str. 531954]
gi|322647472|gb|EFY43961.1| biopolymer transport protein ExbB [Salmonella enterica subsp.
enterica serovar Montevideo str. NC_MB110209-0054]
gi|322648655|gb|EFY45102.1| biopolymer transport protein ExbB [Salmonella enterica subsp.
enterica serovar Montevideo str. OH_2009072675]
gi|322653709|gb|EFY50035.1| biopolymer transport protein ExbB [Salmonella enterica subsp.
enterica serovar Montevideo str. CASC_09SCPH15965]
gi|322657816|gb|EFY54084.1| biopolymer transport protein ExbB [Salmonella enterica subsp.
enterica serovar Montevideo str. 19N]
gi|322663918|gb|EFY60117.1| biopolymer transport protein ExbB [Salmonella enterica subsp.
enterica serovar Montevideo str. 81038-01]
gi|322669070|gb|EFY65221.1| biopolymer transport protein ExbB [Salmonella enterica subsp.
enterica serovar Montevideo str. MD_MDA09249507]
gi|322672935|gb|EFY69042.1| biopolymer transport protein ExbB [Salmonella enterica subsp.
enterica serovar Montevideo str. 414877]
gi|322678073|gb|EFY74136.1| biopolymer transport protein ExbB [Salmonella enterica subsp.
enterica serovar Montevideo str. 366867]
gi|322681250|gb|EFY77283.1| biopolymer transport protein ExbB [Salmonella enterica subsp.
enterica serovar Montevideo str. 413180]
gi|322687820|gb|EFY83787.1| biopolymer transport protein ExbB [Salmonella enterica subsp.
enterica serovar Montevideo str. 446600]
gi|323131517|gb|ADX18947.1| biopolymer transport protein ExbB [Salmonella enterica subsp.
enterica serovar Typhimurium str. 4/74]
gi|323195631|gb|EFZ80808.1| biopolymer transport protein ExbB [Salmonella enterica subsp.
enterica serovar Montevideo str. 609458-1]
gi|323199687|gb|EFZ84777.1| biopolymer transport protein ExbB [Salmonella enterica subsp.
enterica serovar Montevideo str. 556150-1]
gi|323202565|gb|EFZ87605.1| biopolymer transport protein ExbB [Salmonella enterica subsp.
enterica serovar Montevideo str. 609460]
gi|323207947|gb|EFZ92893.1| biopolymer transport protein ExbB [Salmonella enterica subsp.
enterica serovar Montevideo str. 507440-20]
gi|323212500|gb|EFZ97317.1| biopolymer transport protein ExbB [Salmonella enterica subsp.
enterica serovar Montevideo str. 556152]
gi|323215017|gb|EFZ99765.1| biopolymer transport protein ExbB [Salmonella enterica subsp.
enterica serovar Montevideo str. MB101509-0077]
gi|323222747|gb|EGA07112.1| biopolymer transport protein ExbB [Salmonella enterica subsp.
enterica serovar Montevideo str. MB102109-0047]
gi|323224171|gb|EGA08464.1| biopolymer transport protein ExbB [Salmonella enterica subsp.
enterica serovar Montevideo str. MB110209-0055]
gi|323230496|gb|EGA14614.1| biopolymer transport protein ExbB [Salmonella enterica subsp.
enterica serovar Montevideo str. MB111609-0052]
gi|323235153|gb|EGA19239.1| biopolymer transport protein ExbB [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009083312]
gi|323239193|gb|EGA23243.1| biopolymer transport protein ExbB [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009085258]
gi|323244450|gb|EGA28456.1| biopolymer transport protein ExbB [Salmonella enterica subsp.
enterica serovar Montevideo str. 315731156]
gi|323247065|gb|EGA31031.1| biopolymer transport protein ExbB [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2009159199]
gi|323253453|gb|EGA37282.1| biopolymer transport protein ExbB [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008282]
gi|323256241|gb|EGA39977.1| biopolymer transport protein ExbB [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008283]
gi|323262584|gb|EGA46140.1| biopolymer transport protein ExbB [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008284]
gi|323267321|gb|EGA50805.1| biopolymer transport protein ExbB [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008285]
gi|323269276|gb|EGA52731.1| biopolymer transport protein ExbB [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008287]
gi|326629193|gb|EGE35536.1| biopolymer transport protein ExbB [Salmonella enterica subsp.
enterica serovar Gallinarum str. 9]
gi|332990024|gb|AEF09007.1| biopolymer transport protein ExbB [Salmonella enterica subsp.
enterica serovar Typhimurium str. UK-1]
Length = 244
Score = 78.2 bits (191), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 108/223 (48%), Gaps = 4/223 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S++ ++ + VKC++ L + S+++W++ KSV F T +R+ + + +SL
Sbjct: 9 DLSVWGMYQHADIVVKCVMIGLILASVVTWAIFFSKSVEFFTQKRRLKREQLQLADARSL 68
Query: 70 ETVCKSLKNHHNIGLAAIFMS-AMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ L+A ++ A +E + S +G+ GI++R ++ +A +
Sbjct: 69 DQASDIAAGFSAKSLSAQLINEAQNELELS--QGSEDNEGIKERTGFRLERRVAAVGRYM 126
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
+L ++ + VG+ G V G+M F IA + N+ V PGI E+L++ +GL
Sbjct: 127 GRGNGYLATIGAISPFVGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGIAEALLATAIGLV 186
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
+IP+ + YN F + + A + + SR + N S
Sbjct: 187 AAIPAVVIYNIFARQIGSYKATLGDVAAQVLLLQSRDLDLNAS 229
>gi|91977799|ref|YP_570458.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris BisB5]
gi|91684255|gb|ABE40557.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris BisB5]
Length = 294
Score = 78.2 bits (191), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 103/203 (50%), Gaps = 6/203 (2%)
Query: 5 GLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFW 64
GLA ++S + +F+Q + VK ++ L S+++W++ I K + R + R +
Sbjct: 64 GLA--ELSPWTMFLQADIVVKAVMVGLAFASVITWTIFIAKKIELGRARWRLRSALKQIA 121
Query: 65 SGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARE 124
+SL +L + ++ L ++ +A+ E + S G S GI++R+ + E
Sbjct: 122 ESRSLSEAQLALGDSDHL-LTSLVTAAVREARLSA--GIASDSGIKERVASSFSEIVRAE 178
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISIL 183
+ + FL S+ + +G+ G V G+M F I+ + N+ V PGI E+L++
Sbjct: 179 ARHMRHGMGFLASIGATAPFIGLFGTVWGIMNSFIGISKSQTTNLAVVAPGIAEALLATA 238
Query: 184 LGLCVSIPSSIAYNKFIEDSKKF 206
+GL +IP+ + YN F +++ +
Sbjct: 239 IGLVAAIPAVLIYNHFTRETRVY 261
>gi|107028621|ref|YP_625716.1| MotA/TolQ/ExbB proton channel [Burkholderia cenocepacia AU 1054]
gi|116690220|ref|YP_835843.1| MotA/TolQ/ExbB proton channel [Burkholderia cenocepacia HI2424]
gi|170733560|ref|YP_001765507.1| MotA/TolQ/ExbB proton channel [Burkholderia cenocepacia MC0-3]
gi|206560652|ref|YP_002231417.1| putative bipolymer transport protein [Burkholderia cenocepacia
J2315]
gi|105897785|gb|ABF80743.1| outer membrane transport energization protein ExbB [Burkholderia
cenocepacia AU 1054]
gi|116648309|gb|ABK08950.1| outer membrane transport energization protein ExbB [Burkholderia
cenocepacia HI2424]
gi|169816802|gb|ACA91385.1| MotA/TolQ/ExbB proton channel [Burkholderia cenocepacia MC0-3]
gi|198036694|emb|CAR52593.1| putative bipolymer transport protein [Burkholderia cenocepacia
J2315]
Length = 244
Score = 78.2 bits (191), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 100/232 (43%), Gaps = 26/232 (11%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
M +YG+A ++ Q + I L + S+LSW VI+ K N I L R + E
Sbjct: 1 MQSYGIA-------HVWAQGDFVTRAIAITLLVMSVLSWIVIVIKGWNVIRLNRLTKNAE 53
Query: 61 QLFWSGQSLETVCKSLKNHHNIGLAA------IFMSAMSEWKKSCDKGARSPIGIQDRID 114
Q FW + + K L GLAA F++ K++ D ++ + DR+D
Sbjct: 54 QAFWHSDNFDDGIKKL------GLAASTPNDNPFLALALSGKEAADHHHQTQPHLHDRMD 107
Query: 115 ------RMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN 168
R + + + + L+ L S+ S VG+ G V G+ +I +
Sbjct: 108 VSDWVTRCLKDTMDEGISRMQSGLAILASVGSTAPFVGLFGTVWGIYHALLAIGATGQTS 167
Query: 169 VVSIPGII-ESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
+ + G + ESLI GL V+IP+ + YN +K ++ FA+ A
Sbjct: 168 IDQVAGPVGESLIMTAFGLFVAIPAVLGYNALTRANKGVVSKLRRFAHGLHA 219
>gi|206891066|ref|YP_002248792.1| TolQ protein [Thermodesulfovibrio yellowstonii DSM 11347]
gi|206743004|gb|ACI22061.1| TolQ protein [Thermodesulfovibrio yellowstonii DSM 11347]
Length = 209
Score = 78.2 bits (191), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 101/207 (48%), Gaps = 11/207 (5%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
M+ ++ L Q G K ++ +L FSI SW++I K F ++++ ++F F +
Sbjct: 3 MEPTVIDLIKQTGFIAKSVLLILLFFSIFSWAIIFYKWKIFKNMKKENQKFFDAFINSNG 62
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ + K +A+++ + +E +G S +D ++ + E +I
Sbjct: 63 TKELFSLAKRFELSPIASLYRAVFAE-----TQGRNSV-----NLDAIVKKYSSDEANKI 112
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLC 187
L FL + S +G+ G V G+M F+SI S ++ ++ PGI E+LI+ GL
Sbjct: 113 ESYLGFLATTGSTTPFIGLFGTVWGIMDAFRSIGIKGSASIATVAPGIAEALITTAAGLF 172
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFA 214
+IP+ IAYN F + K +++ F+
Sbjct: 173 AAIPAVIAYNYFTSQANKIINEVQDFS 199
>gi|221198506|ref|ZP_03571552.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
multivorans CGD2M]
gi|221208544|ref|ZP_03581545.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
multivorans CGD2]
gi|221171535|gb|EEE03981.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
multivorans CGD2]
gi|221182438|gb|EEE14839.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
multivorans CGD2M]
Length = 243
Score = 78.2 bits (191), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 100/236 (42%), Gaps = 34/236 (14%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
M +YG+A ++ Q + I L + SILSW VI+ K N + L R + E
Sbjct: 1 MQSYGIA-------HVWAQGDFVTRAIAITLLVMSILSWIVIVVKGWNVVRLNRLTKNAE 53
Query: 61 QLFWSGQSLETVCKSLKNHHNIGLAA------IFMSAMSEWKKSCDKGARSPIGIQDRID 114
Q FW E K L GLAA F++ K++ D ++ + DR+D
Sbjct: 54 QGFWHSDDFEDGIKKL------GLAASTPADNPFLALALSGKEAADHHHQTQPHLHDRMD 107
Query: 115 ----------RMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGY 164
MD IAR + L+ L S+ S VG+ G V G+ +I
Sbjct: 108 VSDWVTRCLKDTMDEGIAR----MQSGLAILASIGSTAPFVGLFGTVWGIYHALLAIGMT 163
Query: 165 YSNNVVSIPGII-ESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
++ + G + ESLI GL V+IP+ + YN +K ++ FA+ A
Sbjct: 164 GQTSIDQVAGPVGESLIMTAFGLFVAIPAVLGYNALTRANKGIVSKLRRFAHGLHA 219
>gi|171320683|ref|ZP_02909699.1| MotA/TolQ/ExbB proton channel [Burkholderia ambifaria MEX-5]
gi|171094086|gb|EDT39179.1| MotA/TolQ/ExbB proton channel [Burkholderia ambifaria MEX-5]
Length = 243
Score = 78.2 bits (191), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 96/226 (42%), Gaps = 14/226 (6%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
M +YG+A ++ Q + I L + S+LSW VII K N I L R + E
Sbjct: 1 MQSYGIA-------HVWAQGDFVTRAIAITLLVMSVLSWIVIIVKGWNVIRLNRLTKNAE 53
Query: 61 QLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRID------ 114
Q FW + K L + F++ K++ D ++ + DR+D
Sbjct: 54 QAFWHSDDFDDGIKKLGLTASTPSDNPFLALALSGKEAADHHHQTQPHLHDRMDVSDWVT 113
Query: 115 RMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG 174
R + + + + L+ L S+ S VG+ G V G+ I ++ + G
Sbjct: 114 RCLKDTMDEGISRMQAGLAILASIGSTAPFVGLFGTVWGIYHALLVIGATGQTSIDQVAG 173
Query: 175 II-ESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
+ ESLI GL V+IP+ + YN +K A ++ FA+ A
Sbjct: 174 PVGESLIMTAFGLFVAIPAVLGYNALTRANKGVASKLRRFAHGLHA 219
>gi|194444554|ref|YP_002042424.1| biopolymer transport protein ExbB [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
gi|194403217|gb|ACF63439.1| tonB-system energizer ExbB [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
Length = 244
Score = 78.2 bits (191), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 108/223 (48%), Gaps = 4/223 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S++ ++ + VKC++ L + S+++W++ KSV F T +R+ + + +SL
Sbjct: 9 DLSVWGMYQHADIVVKCVMIGLILASVVTWAIFFSKSVEFFTQKRRLKREQLQLADARSL 68
Query: 70 ETVCKSLKNHHNIGLAAIFMS-AMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ L+A ++ A +E + S +G+ GI++R ++ +A +
Sbjct: 69 DQASDIAAGFSAKSLSAQLINEAQNELELS--QGSEDNEGIKERTGFRLERRVAAVGRYM 126
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
+L ++ + VG+ G V G+M F IA + N+ V PGI E+L++ +GL
Sbjct: 127 GRGNGYLATIGAISPFVGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGIAEALLATAIGLV 186
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
+IP+ + YN F + + A + + SR + N S
Sbjct: 187 AAIPAVVIYNIFARQIGSYKATLGDVAAQVLLLQSRDLDLNAS 229
>gi|33594403|ref|NP_882047.1| MotA/TolQ/ExbB proton channel family protein [Bordetella pertussis
Tohama I]
gi|5777376|emb|CAB53384.1| ExbB protein [Bordetella pertussis]
gi|33564478|emb|CAE43791.1| MotA/TolQ/ExbB proton channel family protein [Bordetella pertussis
Tohama I]
gi|332383814|gb|AEE68661.1| MotA/TolQ/ExbB proton channel family protein [Bordetella pertussis
CS]
Length = 325
Score = 78.2 bits (191), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 103/224 (45%), Gaps = 17/224 (7%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+ Q K + +L + S+++W +I+ K V + +R++ F FW+ SL
Sbjct: 84 DMGFLHFVAQSDFVGKTLFIILIVMSLVTWYLIVVKVVGNMGMRKRAAHFLNKFWNASSL 143
Query: 70 ETVCKSLKNH-------HNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIA 122
E V + H H LA+ M A K + + R M I
Sbjct: 144 EQVENEIVTHGARDPFSH---LASHAMHAQQHHAKFGATKLEESGSNGEFVSRTMRKVID 200
Query: 123 RELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII----ES 178
E ++ L+ L S+ S VG+ G V G+ + ++ G ++ V+I I E+
Sbjct: 201 EETAKLENGLTVLASVGSTAPFVGLFGTVWGV---YHALVGIGLSDGVTINRIAGPVGEA 257
Query: 179 LISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
LI LGL V+IP+ +AYN F+ +++ F +++ FA++ A L+
Sbjct: 258 LIMTGLGLAVAIPAVLAYNAFVRNNRVFLSRLDAFAHDLFAFLT 301
>gi|253997472|ref|YP_003049536.1| MotA/TolQ/ExbB proton channel [Methylotenera mobilis JLW8]
gi|253984151|gb|ACT49009.1| MotA/TolQ/ExbB proton channel [Methylotenera mobilis JLW8]
Length = 249
Score = 78.2 bits (191), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 98/210 (46%), Gaps = 6/210 (2%)
Query: 17 FMQMGLAVKCIITL-LFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKS 75
F+ G V ++ L L + S+ SW I+ KS+ R ++ + FW SL K
Sbjct: 12 FITAGGPVSMLVALILLVMSVASWYFIVTKSIAVWRTRSAYKAYLAAFWQAPSLAAAVKQ 71
Query: 76 LKNHHNIGLAAIFMSAM--SEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLS 133
+ G+A + A+ +E KS A + + + R M+ +I E + L+
Sbjct: 72 GQQVSATGMARLAEKAVQAAEHHKSHAAKAVDIVAQDEFVARAMNRSITEEAANMEGGLT 131
Query: 134 FLGSMSSAGLLVGILGAVLGMMGFFQSIA--GYYSNNVVSIPGIIESLISILLGLCVSIP 191
L S+ S VG+ G V G+ SI+ G + + V+ P + E+LI GL V+IP
Sbjct: 132 VLASVGSVSPFVGLFGTVWGIYHALASISLSGQATLDKVAGP-VGEALIMTAFGLAVAIP 190
Query: 192 SSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+ +AYN + ++ + ++E F E ++
Sbjct: 191 AVLAYNAIVRSNRALSAELEKFGYELHTLI 220
>gi|253999469|ref|YP_003051532.1| MotA/TolQ/ExbB proton channel [Methylovorus sp. SIP3-4]
gi|313201498|ref|YP_004040156.1| mota/tolq/exbb proton channel [Methylovorus sp. MP688]
gi|253986148|gb|ACT51005.1| MotA/TolQ/ExbB proton channel [Methylovorus sp. SIP3-4]
gi|312440814|gb|ADQ84920.1| MotA/TolQ/ExbB proton channel [Methylovorus sp. MP688]
Length = 247
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 99/219 (45%), Gaps = 8/219 (3%)
Query: 17 FMQMGLAVKCIITL-LFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKS 75
F+ G V + L L + S+ SW +II K + + LR R + Q FW SLE +
Sbjct: 12 FITDGGVVSITVALCLLVMSVASWYLIIVKGIQSLRLRAASRNYSQRFWDASSLEVAIRE 71
Query: 76 LKNHHNIG-LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSF 134
+ LA + A ++ K + + R M I+ E + L+
Sbjct: 72 NGVSTPMSRLANQAVEAAEHHQRHASKRLADACNQDEFVARSMRRVISDEGARLENGLTI 131
Query: 135 LGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGLCVSIPS 192
L S+ S VG+ G V G+ SI +G + + V+ P + E+LI GL V+IP+
Sbjct: 132 LASVGSVSPFVGLFGTVWGIYHALASISMSGQATLDKVAGP-VGEALIMTAFGLAVAIPA 190
Query: 193 SIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ---TEGN 228
+AYN + ++ Q++ FAN+ +L+ T GN
Sbjct: 191 VLAYNALVRSNRVLMAQLDSFANDLHVLLTTGAPLTHGN 229
>gi|326624910|gb|EGE31255.1| biopolymer transport protein ExbB [Salmonella enterica subsp.
enterica serovar Dublin str. 3246]
Length = 239
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 108/223 (48%), Gaps = 4/223 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S++ ++ + VKC++ L + S+++W++ KSV F T +R+ + + +SL
Sbjct: 4 DLSVWGMYQHADIVVKCVMIGLILASVVTWAIFFSKSVEFFTQKRRLKREQLQLADARSL 63
Query: 70 ETVCKSLKNHHNIGLAAIFMS-AMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ L+A ++ A +E + S +G+ GI++R ++ +A +
Sbjct: 64 DQASDIAAGFSAKSLSAQLINEAQNELELS--QGSEDNEGIKERTGFRLERRVAAVGRYM 121
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
+L ++ + VG+ G V G+M F IA + N+ V PGI E+L++ +GL
Sbjct: 122 GRGNGYLATIGAISPFVGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGIAEALLATAIGLV 181
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
+IP+ + YN F + + A + + SR + N S
Sbjct: 182 AAIPAVVIYNIFARQIGSYKATLGDVAAQVLLLQSRDLDLNAS 224
>gi|167616913|ref|ZP_02385544.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Burkholderia thailandensis Bt4]
gi|257140844|ref|ZP_05589106.1| MotA/TolQ/ExbB proton channel family protein [Burkholderia
thailandensis E264]
Length = 241
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 101/235 (42%), Gaps = 33/235 (14%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
M +YG+A ++ Q + I L + SILSW VI+ K N I L+R ++ E
Sbjct: 1 MQSYGIA-------HVWAQGDFVTRSIAIALLVMSILSWMVIVIKGWNVIRLKRLSKDAE 53
Query: 61 QLFWSGQSLETVCKSLKNHHNIGLAA-----IFMSAMSEWKKSCDKGARSPIGIQDRID- 114
Q FW + K L GLA+ F++ K++ D ++ + DR+D
Sbjct: 54 QSFWHSDDFDEGVKKL------GLASSSQDNPFLALALSGKEAADHHHQTQPHLHDRMDV 107
Query: 115 ---------RMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYY 165
MD IAR + L+ L S+ S VG+ G V G+ I
Sbjct: 108 SDWVTRCLKDTMDEGIAR----MQGGLAILASIGSTAPFVGLFGTVWGIYHALLVIGATG 163
Query: 166 SNNVVSIPGII-ESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
++ + G + ESLI GL V+IP+ + YN +K ++ FA+ A
Sbjct: 164 QTSIDQVAGPVGESLIMTAFGLFVAIPAVLGYNALTRANKSVVSRLRRFAHGLHA 218
>gi|94987137|ref|YP_595070.1| biopolymer transport proteins [Lawsonia intracellularis PHE/MN1-00]
gi|94731386|emb|CAJ54749.1| Biopolymer transport proteins [Lawsonia intracellularis PHE/MN1-00]
Length = 225
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 112/224 (50%), Gaps = 8/224 (3%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREF---EQLFWS 65
MD+SI +L Q + + ++ +L + S+LSW+++ QK +I +R ++ + F
Sbjct: 4 MDLSIISLIAQATVVGQVVLLILLLMSVLSWAMMFQK---WIAIRLAMKKTVLGSERFHD 60
Query: 66 GQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
+ L S+ L + ++E+ +S + G + I + + R + ++ E+
Sbjct: 61 ARELRNAVHSIGRDMVSPLYVVAHEGVTEFNRSKEAGNSEEV-IVENVRRALRQGVSTEM 119
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILL 184
++ LSFL + ++ +G+ G + G+M F SI S ++ ++ PGI E+LI+
Sbjct: 120 TRLSSSLSFLATTANTAPFIGLFGTIWGIMHTFHSIGAMKSASLATVAPGISEALIATAF 179
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
GL V+IP+++ YN F+ ++ FA F + R+ N
Sbjct: 180 GLAVAIPATVGYNIFVGKLGDLESKLVNFAGMFLNRVHRELNAN 223
>gi|161524253|ref|YP_001579265.1| MotA/TolQ/ExbB proton channel [Burkholderia multivorans ATCC 17616]
gi|189350990|ref|YP_001946618.1| biopolymer transport protein [Burkholderia multivorans ATCC 17616]
gi|221214855|ref|ZP_03587824.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
multivorans CGD1]
gi|160341682|gb|ABX14768.1| MotA/TolQ/ExbB proton channel [Burkholderia multivorans ATCC 17616]
gi|189335012|dbj|BAG44082.1| biopolymer transport protein [Burkholderia multivorans ATCC 17616]
gi|221165394|gb|EED97871.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
multivorans CGD1]
Length = 243
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 100/236 (42%), Gaps = 34/236 (14%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
M +YG+A ++ Q + I L + S+LSW VI+ K N + L R + E
Sbjct: 1 MQSYGIA-------HVWAQGDFVTRAIAITLLVMSVLSWIVIVVKGWNVVRLNRLTKNAE 53
Query: 61 QLFWSGQSLETVCKSLKNHHNIGLAA------IFMSAMSEWKKSCDKGARSPIGIQDRID 114
Q FW E K L GLAA F++ K++ D ++ + DR+D
Sbjct: 54 QGFWHSDDFEDGIKKL------GLAASTPADNPFLALALSGKEAADHHHQTQPHLHDRMD 107
Query: 115 ----------RMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGY 164
MD IAR + L+ L S+ S VG+ G V G+ +I
Sbjct: 108 VSDWVTRCLKDTMDEGIAR----MQSGLAILASIGSTAPFVGLFGTVWGIYHALLAIGMT 163
Query: 165 YSNNVVSIPGII-ESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
++ + G + ESLI GL V+IP+ + YN +K ++ FA+ A
Sbjct: 164 GQTSIDQVAGPVGESLIMTAFGLFVAIPAVLGYNALTRANKGIVSKLRRFAHGLHA 219
>gi|78066997|ref|YP_369766.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. 383]
gi|77967742|gb|ABB09122.1| outer membrane transport energization protein ExbB [Burkholderia
sp. 383]
Length = 243
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 99/232 (42%), Gaps = 26/232 (11%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
M +YG+A ++ Q + I L + S+LSW VI+ K N I L R + E
Sbjct: 1 MQSYGIA-------HVWAQGDFVTRAIAITLLVMSVLSWIVIVIKGWNVIRLNRLTKNAE 53
Query: 61 QLFWSGQSLETVCKSLKNHHNIGLAA------IFMSAMSEWKKSCDKGARSPIGIQDRID 114
Q FW + K L GLAA F++ K++ D ++ + DR+D
Sbjct: 54 QAFWHSDDFDDGIKKL------GLAASTPNDNPFLALALSGKEAADHHHQTQPHLHDRMD 107
Query: 115 ------RMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN 168
R + + + + L+ L S+ S VG+ G V G+ +I +
Sbjct: 108 VSDWVTRCLKDTMDEGISRMQSGLAILASIGSTAPFVGLFGTVWGIYHALLAIGASGQTS 167
Query: 169 VVSIPGII-ESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
+ + G + ESLI GL V+IP+ + YN +K ++ FA+ A
Sbjct: 168 IDQVAGPVGESLIMTAFGLFVAIPAVLGYNALTRANKGIVSKLRRFAHGLHA 219
>gi|146313054|ref|YP_001178128.1| biopolymer transport protein ExbB [Enterobacter sp. 638]
gi|145319930|gb|ABP62077.1| outer membrane transport energization protein ExbB [Enterobacter
sp. 638]
Length = 238
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 98/192 (51%), Gaps = 4/192 (2%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S++ ++ + VK ++ L + S+++W++ KSV I+ +R+ + +Q +SL
Sbjct: 4 DLSVWGMYQHADIVVKIVMIGLILASVITWAIFFSKSVELISQKRRLKREQQQLAEARSL 63
Query: 70 ETVCKSLKNHHNIGLAAIFMS-AMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ H L ++ ++ A +E + S G+ GI++R ++ +A +
Sbjct: 64 DQANDMTSAFHAKSLTSMLVNEAQNELELSA--GSEDNEGIKERTGFRLERRVAAVGRHM 121
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
+L ++ + VG+ G V G+M F IA + N+ V PGI E+L++ +GL
Sbjct: 122 GRGNGYLATIGAISPFVGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGIAEALLATAIGLI 181
Query: 188 VSIPSSIAYNKF 199
+IP+ + YN F
Sbjct: 182 AAIPAVVIYNVF 193
>gi|312115235|ref|YP_004012831.1| tonB-system energizer ExbB [Rhodomicrobium vannielii ATCC 17100]
gi|311220364|gb|ADP71732.1| tonB-system energizer ExbB [Rhodomicrobium vannielii ATCC 17100]
Length = 311
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 90/191 (47%), Gaps = 2/191 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
++S +F + VK ++ L + S L+W+V K+ RR + S SL
Sbjct: 81 ELSPLGMFHAADVVVKTVMIALMLASFLTWTVFFAKTAELWAARRGLKAAIMSIDSAPSL 140
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+ +++ G A+ A+ E ++S G G+++R+ + A AR +
Sbjct: 141 DAAAEAVAQTKGPGAVAV-AEAVREVQRSRTLGNPDKDGVKERVASRLSRAEARASRHVM 199
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCV 188
+ + ++ S VG+ G V G+M F I+ + N+ V PGI E+L++ LGL
Sbjct: 200 VGIGIVATIGSVAPFVGLFGTVWGIMNAFIGISKAQTTNLAVVAPGIAEALLATALGLVA 259
Query: 189 SIPSSIAYNKF 199
+IP+ + YN F
Sbjct: 260 AIPAVVVYNAF 270
>gi|115373681|ref|ZP_01460975.1| adventurous gliding motility protein X [Stigmatella aurantiaca
DW4/3-1]
gi|115369228|gb|EAU68169.1| adventurous gliding motility protein X [Stigmatella aurantiaca
DW4/3-1]
Length = 191
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 91/188 (48%), Gaps = 9/188 (4%)
Query: 45 KSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIF------MSAMSEWKKS 98
K+ R Q F FW LE + ++ + L+ +F +S +++ K+
Sbjct: 2 KATQLSRARSQSLTFLDTFWKATRLEGIYQTAQGLEGSPLSKVFCAGYEELSKLAQAKEG 61
Query: 99 CDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFF 158
D +G + ++R + A ++ E+ ++ FLG++ +A VG+ G V+G++ F
Sbjct: 62 TDGAMSDRLGGIENVERALHRAATTQITELEARVPFLGTVGAAAPFVGLFGTVIGILNAF 121
Query: 159 QSIA--GYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANE 216
IA G + + V+ P + +L + GL +IP+ +AYN F+ K F +M F+ +
Sbjct: 122 NEIADKGNATLSTVAAP-VGNALFATAAGLFAAIPAVVAYNSFVSRIKIFDTEMSNFSAD 180
Query: 217 FSAILSRQ 224
F I+ R
Sbjct: 181 FLNIIKRH 188
>gi|316933259|ref|YP_004108241.1| tonB-system energizer ExbB [Rhodopseudomonas palustris DX-1]
gi|315600973|gb|ADU43508.1| tonB-system energizer ExbB [Rhodopseudomonas palustris DX-1]
Length = 308
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 99/198 (50%), Gaps = 4/198 (2%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
++S + +F+ + VK ++ L I S+++W++ I K + R + R + +SL
Sbjct: 81 ELSPWTMFLNADIVVKIVMIGLAISSVITWTIFIAKKIELGRARIRLRRSLKQIGESRSL 140
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+L + H++ L+ + +A+ E K S G S GI++R + E +
Sbjct: 141 AEAQMALGDKHSV-LSMLLAAALREAKLSA--GLSSDEGIKERAASSFSEYVRAEGRHMR 197
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCV 188
+ FL ++ + +G+ G V G+M F I+ + N+ V PGI E+L++ +GL
Sbjct: 198 RGMGFLATIGATAPFIGLFGTVWGIMNSFIGISKSQTTNLAVVAPGIAEALLATAIGLVA 257
Query: 189 SIPSSIAYNKFIEDSKKF 206
+IP+ I YN F + K +
Sbjct: 258 AIPAVIIYNHFSREIKVY 275
>gi|172061160|ref|YP_001808812.1| MotA/TolQ/ExbB proton channel [Burkholderia ambifaria MC40-6]
gi|171993677|gb|ACB64596.1| MotA/TolQ/ExbB proton channel [Burkholderia ambifaria MC40-6]
Length = 243
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 95/226 (42%), Gaps = 14/226 (6%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
M +YG+A ++ Q + I L + S+LSW VII K N I L R + E
Sbjct: 1 MQSYGIA-------HVWAQGDFVTRAIAITLLVMSVLSWIVIIVKGWNVIRLNRLTKNAE 53
Query: 61 QLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRID------ 114
Q FW E K L + F++ K++ D ++ + DR+D
Sbjct: 54 QAFWHSDDFEDGIKKLGLTASTPSDNPFLALALSGKEAADHHHQTQPHLHDRMDVSDWVT 113
Query: 115 RMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG 174
R + + + + L+ L S+ S VG+ G V G+ I ++ + G
Sbjct: 114 RCLKDTMDEGISRMQAGLAILASIGSTAPFVGLFGTVWGIYHALLVIGATGQTSIDQVAG 173
Query: 175 II-ESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
+ ESLI GL V+IP+ + YN +K ++ FA+ A
Sbjct: 174 PVGESLIMTAFGLFVAIPAVLGYNALTRANKGVVSKLRRFAHGLHA 219
>gi|258543290|ref|YP_003188723.1| ExbB/TolQ/MotA [Acetobacter pasteurianus IFO 3283-01]
gi|256634368|dbj|BAI00344.1| ExbB/TolQ/MotA [Acetobacter pasteurianus IFO 3283-01]
gi|256637426|dbj|BAI03395.1| ExbB/TolQ/MotA [Acetobacter pasteurianus IFO 3283-03]
gi|256640478|dbj|BAI06440.1| ExbB/TolQ/MotA [Acetobacter pasteurianus IFO 3283-07]
gi|256643535|dbj|BAI09490.1| ExbB/TolQ/MotA [Acetobacter pasteurianus IFO 3283-22]
gi|256646590|dbj|BAI12538.1| ExbB/TolQ/MotA [Acetobacter pasteurianus IFO 3283-26]
gi|256649643|dbj|BAI15584.1| ExbB/TolQ/MotA [Acetobacter pasteurianus IFO 3283-32]
gi|256652631|dbj|BAI18565.1| ExbB/TolQ/MotA [Acetobacter pasteurianus IFO 3283-01-42C]
gi|256655687|dbj|BAI21614.1| ExbB/TolQ/MotA [Acetobacter pasteurianus IFO 3283-12]
Length = 258
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 112/220 (50%), Gaps = 10/220 (4%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
+ S + +F+ G V+C++ LL + S+L+W++ I KSV F+++RR+ R E+ +
Sbjct: 21 LSFSPWEMFLNAGSVVQCVMALLALASLLTWTIFIAKSVEFLSIRRKLRTAEKTLEEAGT 80
Query: 69 LETVCKSLKNH---HNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
L K + + H + +AA A+S + ++G + I + ++R ++ A R L
Sbjct: 81 LALGEKGTRQNSIAHTLVMAAETEKAVSHDIPNDNEGLKERIVLH--LER-LEAAEGRRL 137
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILL 184
T L+ +G+ S +G+ G V G+M F IA + ++ V PGI E+L++ L
Sbjct: 138 MRGTGLLATIGATSP---FIGLFGTVWGIMTSFTGIAASKATSLAVVAPGIAEALLATAL 194
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
GL +IP+ + YN S Q+ + ++SR
Sbjct: 195 GLVAAIPAVVIYNHLARQSASCRAQVADLTSLIMRLVSRD 234
>gi|167578827|ref|ZP_02371701.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Burkholderia thailandensis TXDOH]
Length = 242
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 101/236 (42%), Gaps = 34/236 (14%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
M +YG+A ++ Q + I L + SILSW VI+ K N I L+R ++ E
Sbjct: 1 MQSYGIA-------HVWAQGDFVTRSIAIALLVMSILSWMVIVIKGWNVIRLKRLSKDAE 53
Query: 61 QLFWSGQSLETVCKSLKNHHNIGLAA------IFMSAMSEWKKSCDKGARSPIGIQDRID 114
Q FW + K L GLA+ F++ K++ D ++ + DR+D
Sbjct: 54 QSFWHSDDFDEGVKKL------GLASSSSQDNPFLALALSGKEAADHHHQTQPHLHDRMD 107
Query: 115 ----------RMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGY 164
MD IAR + L+ L S+ S VG+ G V G+ I
Sbjct: 108 VSDWVTRCLKDTMDEGIAR----MQGGLAILASIGSTAPFVGLFGTVWGIYHALLVIGAT 163
Query: 165 YSNNVVSIPGII-ESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
++ + G + ESLI GL V+IP+ + YN +K ++ FA+ A
Sbjct: 164 GQTSIDQVAGPVGESLIMTAFGLFVAIPAVLGYNALTRANKSVVSRLRRFAHGLHA 219
>gi|300724564|ref|YP_003713889.1| ExbB [Xenorhabdus nematophila ATCC 19061]
gi|297631106|emb|CBJ91794.1| ExbB [Xenorhabdus nematophila ATCC 19061]
Length = 333
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 98/193 (50%), Gaps = 6/193 (3%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG-QS 68
D+S++ ++ VK ++ L I S+++W++ K + RR+ R+ EQL + +
Sbjct: 105 DLSVWGMYQNADAVVKSVMVGLVIASVITWALFFSKGTELLMARRRLRK-EQLSLANVAN 163
Query: 69 LETVCKSLKNHHNIGLAAIFMS-AMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
LE K +N ++ + +S A SE ++ + GI++R M+ A+A
Sbjct: 164 LEAAAKIAENFDKQSISRLLLSEAQSE--RALSAASTDKEGIKERTSFRMERAVAAISRH 221
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
+ +L ++ + VG+ G V G+M F IA + N+ V PGI E+L++ LGL
Sbjct: 222 MGRGNGYLATIGAISPFVGLFGTVWGIMNSFIGIAHSQTTNLAVVAPGIAEALLATALGL 281
Query: 187 CVSIPSSIAYNKF 199
+IP+ + YN F
Sbjct: 282 MAAIPAVVIYNIF 294
>gi|296104662|ref|YP_003614808.1| biopolymer transport protein ExbB [Enterobacter cloacae subsp.
cloacae ATCC 13047]
gi|295059121|gb|ADF63859.1| biopolymer transport protein ExbB [Enterobacter cloacae subsp.
cloacae ATCC 13047]
Length = 243
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 97/192 (50%), Gaps = 4/192 (2%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S++ ++ + VK ++ L + S+++W++ KS I+ +R+ + +Q +SL
Sbjct: 9 DLSVWGMYHHADIVVKIVMIGLILASVITWAIFFGKSAELISQKRRLKREQQQLAEARSL 68
Query: 70 ETVCKSLKNHHNIGLAAIFMS-AMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ + H L + ++ A +E + S G+ GI++R ++ +A +
Sbjct: 69 DQASDMTSSFHAKSLTTLLVNEAQNELELSA--GSEDNEGIKERTGFRLERRVAAVGRHM 126
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
+L ++ + VG+ G V G+M F IA + N+ V PGI E+L++ +GL
Sbjct: 127 GRGNGYLATIGAISPFVGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGIAEALLATAIGLV 186
Query: 188 VSIPSSIAYNKF 199
+IP+ + YN F
Sbjct: 187 AAIPAVVIYNVF 198
>gi|28867901|ref|NP_790520.1| TonB system transport protein ExbB [Pseudomonas syringae pv. tomato
str. DC3000]
gi|28851137|gb|AAO54215.1| TonB system transport protein ExbB [Pseudomonas syringae pv. tomato
str. DC3000]
gi|331018208|gb|EGH98264.1| TonB system transport protein ExbB [Pseudomonas syringae pv.
lachrymans str. M302278PT]
Length = 230
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 105/217 (48%), Gaps = 15/217 (6%)
Query: 22 LAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHN 81
L + +TLL IFS+++W++++ K++ L RQ R + FW+ + L+ +L H+
Sbjct: 8 LITQSSMTLLVIFSLVTWALLLGKTLQHWRLSRQNRRYSTQFWAARDLK---NALHLPHS 64
Query: 82 IG----LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGS 137
G L A++ S D G QD ++R + I +E + + L S
Sbjct: 65 EGSLARLTDAGAQALATPHDSPDLG--HSWNRQDLLERSLRQQIHKERRRLESGMILLAS 122
Query: 138 MSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCVSIPSSIAY 196
+ S +G+ G V G++ +I+ S ++ + G I E+L++ +G+ V++P+ +AY
Sbjct: 123 IGSTAPFIGLFGTVFGIIHALTAISQAKSASIAVVAGPIGEALVATGVGIAVAVPAVLAY 182
Query: 197 NKFIEDSKKFAMQMEGFANEFSAILSR-----QTEGN 228
N F K +E FA +F + R Q EG
Sbjct: 183 NFFGRRMKLVIADLEEFAVDFLNLSQRNAFRLQPEGR 219
>gi|39936540|ref|NP_948816.1| enterochelin uptake protein ExbB [Rhodopseudomonas palustris
CGA009]
gi|39650396|emb|CAE28919.1| possible exbB, uptake of enterochelin; tonB-dependent uptake of B
colicins [Rhodopseudomonas palustris CGA009]
Length = 234
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 99/198 (50%), Gaps = 4/198 (2%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
++S + +F+ + VK ++ L I S+++W++ I K V R + R + +SL
Sbjct: 7 ELSPWTMFLNADIIVKIVMIGLAISSVITWTIFIAKKVELGRARFRLRRSLKEIGESRSL 66
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+L + H++ L+ + +A+ E K S G S GI++R + E +
Sbjct: 67 AEAQMALGDKHSV-LSMLLAAALREAKLSA--GLSSDEGIKERAASSFSEYVRAEGRHMR 123
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCV 188
+ FL ++ + +G+ G V G+M F I+ + N+ V PGI E+L++ +GL
Sbjct: 124 RGMGFLATIGATAPFIGLFGTVWGIMNSFIGISKSQTTNLAVVAPGIAEALLATAIGLVA 183
Query: 189 SIPSSIAYNKFIEDSKKF 206
+IP+ I YN F + K +
Sbjct: 184 AIPAVIIYNHFSREIKLY 201
>gi|289809365|ref|ZP_06539994.1| biopolymer transport protein ExbB [Salmonella enterica subsp.
enterica serovar Typhi str. AG3]
Length = 203
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 98/192 (51%), Gaps = 4/192 (2%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S++ ++ + VKC++ L + S+++W++ KSV F T +R+ + + +SL
Sbjct: 9 DLSVWGMYQHADIVVKCVMIGLILASVVTWAIFFSKSVEFFTQKRRLKREQLQLADARSL 68
Query: 70 ETVCKSLKNHHNIGLAAIFMS-AMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ L+A ++ A +E + S +G+ GI++R ++ +A +
Sbjct: 69 DQASDIAAGFSAKSLSAQLINEAQNELELS--QGSEDNEGIKERTGFRLERRVAAVGRYM 126
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
+L ++ + VG+ G V G+M F IA + N+ V PGI E+L++ +GL
Sbjct: 127 GRGNGYLATIGAISPFVGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGIAEALLATAIGLV 186
Query: 188 VSIPSSIAYNKF 199
+IP+ + YN F
Sbjct: 187 AAIPAVVIYNIF 198
>gi|213969265|ref|ZP_03397403.1| TonB system transport protein ExbB [Pseudomonas syringae pv. tomato
T1]
gi|301381769|ref|ZP_07230187.1| TonB system transport protein ExbB [Pseudomonas syringae pv. tomato
Max13]
gi|302061031|ref|ZP_07252572.1| TonB system transport protein ExbB [Pseudomonas syringae pv. tomato
K40]
gi|302133871|ref|ZP_07259861.1| TonB system transport protein ExbB [Pseudomonas syringae pv. tomato
NCPPB 1108]
gi|213925943|gb|EEB59500.1| TonB system transport protein ExbB [Pseudomonas syringae pv. tomato
T1]
gi|330877592|gb|EGH11741.1| TonB system transport protein ExbB [Pseudomonas syringae pv.
morsprunorum str. M302280PT]
Length = 230
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 100/201 (49%), Gaps = 10/201 (4%)
Query: 22 LAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHN 81
L + +TLL IFS+++W++++ K++ L RQ R + FW+ + L+ +L H+
Sbjct: 8 LITQSSMTLLVIFSLVTWALLLGKTLQHWRLSRQNRRYSTQFWAARDLK---NALHLPHS 64
Query: 82 IG----LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGS 137
G L A++ S D G QD ++R + I +E + + L S
Sbjct: 65 EGSLARLTDAGAQALATPHDSPDLG--HSWNRQDLLERSLRQQIHKERRRLESGMILLAS 122
Query: 138 MSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCVSIPSSIAY 196
+ S +G+ G V G++ +I+ S ++ + G I E+L++ +G+ V++P+ +AY
Sbjct: 123 IGSTAPFIGLFGTVFGIIHALTAISQAKSASIAVVAGPIGEALVATGVGIAVAVPAVLAY 182
Query: 197 NKFIEDSKKFAMQMEGFANEF 217
N F K +E FA +F
Sbjct: 183 NFFGRRMKLVIADLEEFAVDF 203
>gi|229593364|ref|YP_002875483.1| biopolymer transport membrane protein [Pseudomonas fluorescens
SBW25]
gi|229365230|emb|CAY53532.1| biopolymer transport membrane protein [Pseudomonas fluorescens
SBW25]
Length = 322
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 105/224 (46%), Gaps = 5/224 (2%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N G+A D+S + ++ + VK ++ L I SI++W++ I K + +R+ R
Sbjct: 85 NTLGMA-HDLSPWGMYQNADVVVKAVMIGLAIASIITWTIWIAKGFELLGAKRRLRNEIV 143
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
+L+ +S + + A+ E + S + AR GI++R+ ++ +
Sbjct: 144 HLKKATTLKEASESATKKGTLA-NTLVHDALEEMRLSAN--AREKEGIKERVAFRLERLV 200
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLI 180
A ++ L ++ S VG+ G V G+M F IA + N+ V PGI E+L+
Sbjct: 201 AACGRNMSSGTGVLATIGSTAPFVGLFGTVWGIMNSFIGIAKTQTTNLAVVAPGIAEALL 260
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+ LGL +IP+ + YN F + Q+ + E ++SR
Sbjct: 261 ATALGLVAAIPAVVIYNVFARSIAGYKAQVSDASAEVLLLVSRD 304
>gi|325122250|gb|ADY81773.1| putative biopolymer transport protein (ExbB-like) [Acinetobacter
calcoaceticus PHEA-2]
Length = 229
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 98/192 (51%), Gaps = 13/192 (6%)
Query: 34 FSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMS 93
FS+++W +I+ K V RQ + F + FWS ++L+ + + +G + A +
Sbjct: 4 FSVVTWGLIVIKLVQTQKADRQSKAFAEEFWSAKNLQDAIQKSE----LGQGPVARIANT 59
Query: 94 EWKKSCDKGARSPIGIQ------DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGI 147
+K D + +Q D ++R + I E ++ + + L S+ + +G+
Sbjct: 60 GFKTLADADDDTHQDLQHSWSRQDLLERHLRKQILSERRQLEKGSALLASIGNNAPFIGL 119
Query: 148 LGAVLGMMGFFQSIA--GYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKK 205
G V G++ Q+IA G S +VV+ P I E+L++ +G+ V++P+ +AYN F+ K
Sbjct: 120 FGTVFGIIHALQAIAHSGNASMDVVAGP-IGEALVATGIGIAVAVPAVLAYNYFVRKVKT 178
Query: 206 FAMQMEGFANEF 217
+++ FA +F
Sbjct: 179 IGAELDDFATDF 190
>gi|325518367|gb|EGC98089.1| biopolymer transport protein [Burkholderia sp. TJI49]
Length = 243
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 100/231 (43%), Gaps = 24/231 (10%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
M +YG+A ++ Q + I L + S+LSW VII K N + L R + E
Sbjct: 1 MQSYGIA-------HVWAQGDFVTRAIAITLLVMSVLSWIVIIVKGWNVVRLNRLTKNAE 53
Query: 61 QLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRID------ 114
Q FW + K L + F++ K++ D ++ + DR+D
Sbjct: 54 QAFWHSDDFDDGVKKLGLATSTPSDNPFLALALSGKEAADHHHQTQPHLHDRMDVSDWVT 113
Query: 115 ----RMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNN 168
MD IAR + L+ L S+ S VG+ G V G+ +I +G S +
Sbjct: 114 RCLKDTMDEGIAR----MQSGLAILASIGSTAPFVGLFGTVWGIYHALLAIGMSGQTSID 169
Query: 169 VVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
V+ P + ESLI GL V+IP+ + YN +K ++ FA+ A
Sbjct: 170 QVAGP-VGESLIMTAFGLFVAIPAVLGYNALTRANKGVVSKLRRFAHGLHA 219
>gi|56415100|ref|YP_152175.1| biopolymer transport protein ExbB [Salmonella enterica subsp.
enterica serovar Paratyphi A str. ATCC 9150]
gi|197364029|ref|YP_002143666.1| biopolymer transport protein ExbB [Salmonella enterica subsp.
enterica serovar Paratyphi A str. AKU_12601]
gi|56129357|gb|AAV78863.1| biopolymer transport ExbB protein [Salmonella enterica subsp.
enterica serovar Paratyphi A str. ATCC 9150]
gi|197095506|emb|CAR61070.1| biopolymer transport ExbB protein [Salmonella enterica subsp.
enterica serovar Paratyphi A str. AKU_12601]
Length = 244
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 98/192 (51%), Gaps = 4/192 (2%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S++ ++ + VKC++ L + S+++W++ KSV F T +R+ + + +SL
Sbjct: 9 DLSVWGMYQHADIVVKCVMIGLILASVVTWAIFFSKSVEFFTQKRRLKREQLQLADARSL 68
Query: 70 ETVCKSLKNHHNIGLAAIFMS-AMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ L+A ++ A +E + S +G+ GI++R ++ +A +
Sbjct: 69 DQASDIAAGFSAKSLSAQLINEAQNELELS--QGSEDNEGIKERTGFRLERRVAAVGRYM 126
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
+L ++ + VG+ G V G+M F IA + N+ V PGI E+L++ +GL
Sbjct: 127 GRGNGYLATIGAISPFVGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGIAEALLATAIGLV 186
Query: 188 VSIPSSIAYNKF 199
+IP+ + YN F
Sbjct: 187 AAIPAVVIYNIF 198
>gi|218927873|ref|YP_002345748.1| MotA/TolQ/ExbB proton channel family protein [Yersinia pestis CO92]
gi|115346484|emb|CAL19358.1| MotA/TolQ/ExbB proton channel family protein [Yersinia pestis CO92]
Length = 237
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 104/204 (50%), Gaps = 4/204 (1%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
MD+S++ ++ + VK ++ L + SI++W+++ K RR+ R+ ++ +
Sbjct: 1 MDLSVWGMYQNADVVVKGVMIGLVLASIVTWTILFSKGTELFRARRRLRQEHEVIGAVTD 60
Query: 69 LETVCKSLKNHHNIGLAAIFM-SAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
L+T + ++ ++++ + A++E S + + GI++R ++ +A +
Sbjct: 61 LDTASERAEDFGQGSVSSLLLHEALNERLLSIESNDNN--GIKERTAFRLERRVAAIGRQ 118
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ + FL ++ + VG+ G V G+M F IA + N+ I PGI E+L++ LGL
Sbjct: 119 MGKGNGFLATIGAISPFVGLFGTVWGIMNSFIGIAHSQTTNLAVIAPGIAEALLATALGL 178
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQM 210
+IP+ + YN F + Q+
Sbjct: 179 VAAIPAVVIYNIFARQIGNYRAQV 202
>gi|305432723|ref|ZP_07401883.1| TonB system transporter ExbB [Campylobacter coli JV20]
gi|304444232|gb|EFM36885.1| TonB system transporter ExbB [Campylobacter coli JV20]
Length = 258
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 104/210 (49%), Gaps = 14/210 (6%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
+++S+ +L+ VK +I +L +FS+L+W+V I K + F +++ S
Sbjct: 45 IELSLSSLYQNADEVVKGVIYILVLFSVLAWAVFISKLMQFYFMKKNL---------DSS 95
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMS-EWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
++ + K LKN + + F +S E + +K I++RI+ + I++++
Sbjct: 96 IQKI-KELKNLNELDQTKDFAGVLSLEIQDELEKSEYKNDHIKERIELRLQNTISKQITA 154
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA--GYYSNNVVSIPGIIESLISILLG 185
LS L S+ ++ +G+ G V G+M F IA G S VV+ PGI E+L + G
Sbjct: 155 SKNGLSLLASIGASAPFIGLFGTVWGIMNAFIGIANLGNASLAVVA-PGIAEALFATAFG 213
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFAN 215
L +IP+ + YN + K ++ AN
Sbjct: 214 LIAAIPAVLFYNYLTRKNLKLMHHLDELAN 243
>gi|82618530|gb|AAO67510.2| putative ExbB [Pseudomonas syringae pv. tagetis]
Length = 230
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 99/201 (49%), Gaps = 10/201 (4%)
Query: 22 LAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHN 81
L + +TLL IFS+++W++++ KS L RQ R + FW+ + L+ +L H+
Sbjct: 8 LITQSSMTLLVIFSLVTWALLLGKSFQHWRLTRQNRRYAAQFWAARDLKN---ALHLPHS 64
Query: 82 IG----LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGS 137
G L A++ S D G QD ++R + I +E + + L S
Sbjct: 65 EGSLARLTDAGAQALAAPHDSPDLG--HSWNRQDLLERSLRQQIHKERRRLESGMILLAS 122
Query: 138 MSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCVSIPSSIAY 196
+ S +G+ G V G++ +I+ S ++ + G I E+L++ +G+ V++P+ +AY
Sbjct: 123 IGSTAPFIGLFGTVFGIIHALSAISQARSASIAVVAGPIGEALVATGVGIAVAVPAVLAY 182
Query: 197 NKFIEDSKKFAMQMEGFANEF 217
N F K +E FA +F
Sbjct: 183 NFFGRRLKLVIADLEEFAVDF 203
>gi|182415138|ref|YP_001820204.1| MotA/TolQ/ExbB proton channel [Opitutus terrae PB90-1]
gi|177842352|gb|ACB76604.1| MotA/TolQ/ExbB proton channel [Opitutus terrae PB90-1]
Length = 234
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 104/212 (49%), Gaps = 5/212 (2%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLET 71
+I +F + G K I+ L + S+ +W+V++ K LR FE ++L
Sbjct: 15 NIIEIFERCGTVDKVIVLGLGLASLAAWTVMLGKHFELKRLRLLNYSFETHLRDQRTLLD 74
Query: 72 VCKSLKNHHNIGLAAIFMSAM-SEWKKSC---DKGARSPIGIQDRIDRMMDVAIARELEE 127
+ +S +N I A +F A+ S W+ + ++G S + + + AIAR+
Sbjct: 75 LPESFRNKRVIPYADLFADAVESYWRAAAISKEQGQMSGRARLEHAENAIQRAIARQTLR 134
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ FL S+ S +G+LG V G+M F ++A + + + PG+ ++++ + GL
Sbjct: 135 YESSMIFLASIVSGAPFIGLLGTVWGVMEAFAAVATQQTAGIQQLAPGVSGAMLATIAGL 194
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFS 218
V+IPS YN + +++ ++E +A+ +
Sbjct: 195 VVAIPSVFGYNLLLGNTRAMVTELENYASSLA 226
>gi|330994512|ref|ZP_08318437.1| Biopolymer transport protein exbB [Gluconacetobacter sp. SXCC-1]
gi|329758512|gb|EGG75031.1| Biopolymer transport protein exbB [Gluconacetobacter sp. SXCC-1]
Length = 246
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 107/214 (50%), Gaps = 3/214 (1%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLET 71
S +A+F+ G V+C++TLL + S+L+W++ I KSV + +R + R EQ +L+
Sbjct: 7 SPWAMFLGAGPVVRCVMTLLAMASVLTWTLFIAKSVELLRVRLKLRRAEQALEQANTLDL 66
Query: 72 VCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEK 131
+ +++ +I + M+A +E + S D G+++RI ++ A E +
Sbjct: 67 GEEWTRDNASIA-HTLVMAAETERRCSADIPDDGE-GLKERIVLHLERLEAAEGRRLLRG 124
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSI 190
L ++ + +G+ G V G+M F IA + ++ V PGI E+L++ LGL +I
Sbjct: 125 TGVLATIGATAPFIGLFGTVWGIMTSFTGIAASRATSLAVVAPGIAEALLATALGLVAAI 184
Query: 191 PSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
P+ + YN + Q+ ++SR
Sbjct: 185 PAVVIYNHLARQAASCRAQVADLTALVMRLVSRD 218
>gi|192292333|ref|YP_001992938.1| tonB-system energizer ExbB [Rhodopseudomonas palustris TIE-1]
gi|192286082|gb|ACF02463.1| tonB-system energizer ExbB [Rhodopseudomonas palustris TIE-1]
Length = 303
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 99/198 (50%), Gaps = 4/198 (2%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
++S + +F+ + VK ++ L I S+++W++ I K V R + R + +SL
Sbjct: 76 ELSPWTMFLNADIIVKIVMIGLAISSVITWTIFIAKKVELGRARFRLRRSLKEIGESRSL 135
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+L + H++ L+ + +A+ E K S G S GI++R + E +
Sbjct: 136 AEAQMALGDKHSV-LSMLLAAALREAKLSA--GLSSDEGIKERAASSFSEYVRAEGRHMR 192
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCV 188
+ FL ++ + +G+ G V G+M F I+ + N+ V PGI E+L++ +GL
Sbjct: 193 RGMGFLATIGATAPFIGLFGTVWGIMNSFIGISKSQTTNLAVVAPGIAEALLATAIGLVA 252
Query: 189 SIPSSIAYNKFIEDSKKF 206
+IP+ I YN F + K +
Sbjct: 253 AIPAVIIYNHFSREIKLY 270
>gi|284006382|emb|CBA71618.1| biopolymer transport protein [Arsenophonus nasoniae]
Length = 312
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 105/226 (46%), Gaps = 18/226 (7%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+SI++++ + VK ++ L + SI++W++ K + I RQ ++ +Q +SL
Sbjct: 88 DLSIWSMYQHADMVVKAVMLGLIVASIITWALFFSKGIEMIGAYRQLQKEQQKLSKVKSL 147
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWK--------KSCDKGARSPIGIQDRIDRMMDVAI 121
+ IG+AA F K K+ G+ G +DR ++ A+
Sbjct: 148 DDA---------IGIAATFKKNSVTRKLYDEVVAEKTLSAGSHDLNGTKDRASFRLERAV 198
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLI 180
A + +L ++ + +G+ G V G+M F IA + N+ V PGI E+L+
Sbjct: 199 ASISRYMGRGNGYLATIGAISPFIGLFGTVWGIMNSFIGIAHSQTTNLAVVAPGIAEALL 258
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+ +GL +IP+ + YN F + Q+ A + + +L R +
Sbjct: 259 ATAIGLVAAIPAVVIYNLFARMINTYRGQLGDVAAQATVLLGRDLD 304
>gi|92116361|ref|YP_576090.1| MotA/TolQ/ExbB proton channel [Nitrobacter hamburgensis X14]
gi|91799255|gb|ABE61630.1| outer membrane transport energization protein ExbB [Nitrobacter
hamburgensis X14]
Length = 337
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 105/228 (46%), Gaps = 10/228 (4%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S + +FMQ + VK ++ L S+++W++ + K V RR+ + + SL
Sbjct: 100 DLSPWGMFMQADIVVKAVMVGLAFASLVTWTIWLAKGVELAAARRRAQSCVRKLARADSL 159
Query: 70 ETV-CKSLKNHHNIG-LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
++ G +A + +A E K+S D A GI++R+ + AR E
Sbjct: 160 AAAQAETADGWTGQGTVAELLEAAEGELKRSRDLTAE---GIKERLAIALSRIEARAGRE 216
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
+ L ++ + VG+ G V G+M F I+ + N+ V PGI E+L++ LGL
Sbjct: 217 VARGTGLLATIGATAPFVGLFGTVWGIMNAFIGISLSKTTNLAVVAPGIAEALLATALGL 276
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANE----FSAILSRQTEGNIS 230
+IP+ I YN F + + + E S L RQ G +S
Sbjct: 277 VAAIPAVIIYNVFARALSSYRALLSDASGEIIQHISRDLERQERGLVS 324
>gi|325498559|gb|EGC96418.1| biopolymer transport protein ExbB [Escherichia fergusonii ECD227]
Length = 230
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 99/200 (49%), Gaps = 11/200 (5%)
Query: 16 LFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKS 75
++ + VKC++ L + S+++W++ KSV F +R+ + +QL +SL+ +
Sbjct: 1 MYQHADIVVKCVMIGLILASVVTWAIFFTKSVEFFKQKRRLKREQQLLADARSLDQASEI 60
Query: 76 LKNHHNIGLA-AIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSF 134
+ L+ + A +E + S G+ GI++R ++ ++A + F
Sbjct: 61 AGDFGKYSLSLQLLNEAQNELELSA--GSDDNDGIKERTSFRLERSVAAVGRYMGRGNGF 118
Query: 135 LGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSS 193
L ++ + VG+ G V G+M F IA + N+ V PGI E+L++ +GL +IP+
Sbjct: 119 LATIGAISPFVGLFGTVWGIMNSFIGIAQSQTTNLAVVAPGIAEALLATAIGLVAAIPAV 178
Query: 194 IAYNKFIEDSKKFAMQMEGF 213
+ YN FA Q+ GF
Sbjct: 179 VIYN-------IFARQIAGF 191
>gi|114331602|ref|YP_747824.1| MotA/TolQ/ExbB proton channel [Nitrosomonas eutropha C91]
gi|114308616|gb|ABI59859.1| outer membrane transport energization protein ExbB [Nitrosomonas
eutropha C91]
Length = 265
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 111/212 (52%), Gaps = 10/212 (4%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFW---SGQSLETVCKSLKNHHN- 81
++ LL S+ SW +I+ KS++ + R+ ++F + FW S L+T ++ + H
Sbjct: 20 SVLILLLTLSVASWYLIVTKSISNMIASRRAKDFLKHFWHIDSVPQLKTEISAMTDRHAF 79
Query: 82 IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSA 141
+ LA ++A ++ +K + + G + + R + ++ +E I L+ + S S+
Sbjct: 80 VQLAKTALTATADSQKHGLEKLAAAGGTNELLTRSLRNSLDQEAARIEYGLTIIASAGSS 139
Query: 142 GLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKF 199
+G+ G V G+ I +G + + V+ P + E+LI LGL V+IP+ +AYN F
Sbjct: 140 APYIGLFGTVWGIYHALIQIGLSGQGTLDKVAGP-VGEALIMTALGLAVAIPAVLAYNAF 198
Query: 200 IEDSKKFAMQMEGFANEFSAIL---SRQTEGN 228
I ++ + Q++ FA++ I+ S+ +E N
Sbjct: 199 IRRNRLWMAQLDDFAHDLYTIMTTGSKSSEEN 230
>gi|86149597|ref|ZP_01067827.1| TonB system transport protein ExbB [Campylobacter jejuni subsp.
jejuni CF93-6]
gi|85839865|gb|EAQ57124.1| TonB system transport protein ExbB [Campylobacter jejuni subsp.
jejuni CF93-6]
Length = 253
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 104/210 (49%), Gaps = 14/210 (6%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
+++S+ +L+ VK +I +L +FSIL+W+V I K + F +++ S
Sbjct: 40 IELSLSSLYQNADEVVKGVIYILVLFSILAWAVFISKLMQFYFMKKNL---------DLS 90
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMS-EWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
++ + K LKN + + F +S E + +K I++RI+ + I++++
Sbjct: 91 IQKI-KELKNLNELDQTKDFAGVLSLEIQDELEKSEYKNDHIKERIELRLQNTISKQITA 149
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA--GYYSNNVVSIPGIIESLISILLG 185
LS L S+ ++ +G+ G V G+M F IA G S VV+ PGI E+L + G
Sbjct: 150 SKNGLSLLASIGASAPFIGLFGTVWGIMNAFIGIANLGNASLAVVA-PGIAEALFATAFG 208
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFAN 215
L +IP+ + YN + K ++ AN
Sbjct: 209 LIAAIPAVLFYNYLTRKNLKLMHHLDELAN 238
>gi|153948974|ref|YP_001399584.1| tonB-system energizer ExbB [Yersinia pseudotuberculosis IP 31758]
gi|152960469|gb|ABS47930.1| tonB-system energizer ExbB [Yersinia pseudotuberculosis IP 31758]
Length = 237
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 104/204 (50%), Gaps = 4/204 (1%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
MD+S++ ++ + VK ++ L + SI++W+++ K RR+ R+ ++ +
Sbjct: 1 MDLSVWGMYQNADVVVKGVMIGLVLASIVTWTILFSKGTELFRARRRLRQEHEVIGAVTD 60
Query: 69 LETVCKSLKNHHNIGLAAIFM-SAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
L+T + ++ ++++ + A++E S + + GI++R ++ +A +
Sbjct: 61 LDTASERAEDFGQGSVSSLLLHEALNERLLSIESNDNN--GIKERTAFRLERRVAAIGRQ 118
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
+ + FL ++ + VG+ G V G+M F IA + N+ V PGI E+L++ LGL
Sbjct: 119 MGKGNGFLATIGAISPFVGLFGTVWGIMNSFIGIAHSQTTNLAVVAPGIAEALLATALGL 178
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQM 210
+IP+ + YN F + Q+
Sbjct: 179 VAAIPAVVIYNIFARQIGNYRAQV 202
>gi|291618145|ref|YP_003520887.1| ExbB [Pantoea ananatis LMG 20103]
gi|291153175|gb|ADD77759.1| ExbB [Pantoea ananatis LMG 20103]
gi|327394543|dbj|BAK11965.1| biopolymer transport ExbB protein [Pantoea ananatis AJ13355]
Length = 250
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 104/223 (46%), Gaps = 12/223 (5%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
MN +G I ++ Q + + + +L I S++SWSVI+ K + +++ +
Sbjct: 1 MNEFG-------IEHVWEQGDIITRSVAIILLIMSVMSWSVIVIKCIQGAGMKKIAHRTK 53
Query: 61 QLFWSGQSLETVCKSLKNHHN---IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMM 117
LFWS ++L +L + N LA +AMS + + + G + + I D + R +
Sbjct: 54 HLFWSQKTLPAAIDTLGANGNNPFRDLAIAGHAAMSH-QYTIEAGISNNLDISDWLARAL 112
Query: 118 DVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII- 176
+I + L L S+ S VG+LG V G+ QSI+ ++ + G +
Sbjct: 113 KNSIDDSAANLQSGLGILASIGSTAPFVGLLGTVWGIYHALQSISMADQPDLAHVAGPVG 172
Query: 177 ESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
E+LI GL V+IP+ + +N ++ + FAN+ A
Sbjct: 173 EALIMTAFGLFVAIPAVLGFNTISRRNRALQHAIARFANDLHA 215
>gi|86153953|ref|ZP_01072156.1| biopolymer transport protein [Campylobacter jejuni subsp. jejuni
HB93-13]
gi|88597218|ref|ZP_01100453.1| TonB system transport protein ExbB [Campylobacter jejuni subsp.
jejuni 84-25]
gi|218561858|ref|YP_002343637.1| biopolymer transport protein [Campylobacter jejuni subsp. jejuni
NCTC 11168]
gi|85842914|gb|EAQ60126.1| biopolymer transport protein [Campylobacter jejuni subsp. jejuni
HB93-13]
gi|88190279|gb|EAQ94253.1| TonB system transport protein ExbB [Campylobacter jejuni subsp.
jejuni 84-25]
gi|112359564|emb|CAL34348.1| biopolymer transport protein [Campylobacter jejuni subsp. jejuni
NCTC 11168]
gi|284925471|gb|ADC27823.1| TonB system transport protein ExbB [Campylobacter jejuni subsp.
jejuni IA3902]
gi|315927781|gb|EFV07107.1| biopolymer transport protein exbB [Campylobacter jejuni subsp.
jejuni DFVF1099]
gi|315929096|gb|EFV08327.1| biopolymer transport protein exbB [Campylobacter jejuni subsp.
jejuni 305]
Length = 253
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 104/210 (49%), Gaps = 14/210 (6%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
+++S+ +L+ VK +I +L +FSIL+W+V I K + F +++ S
Sbjct: 40 IELSLSSLYQNADEVVKGVIYILVLFSILAWAVFISKLMQFYFMKKNL---------DLS 90
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMS-EWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
++ + K LKN + + F +S E + +K I++RI+ + I++++
Sbjct: 91 IQKI-KELKNLNELDQTKDFAGVLSLEIQDELEKSEYKNDHIKERIELRLQNTISKQITA 149
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA--GYYSNNVVSIPGIIESLISILLG 185
LS L S+ ++ +G+ G V G+M F IA G S VV+ PGI E+L + G
Sbjct: 150 SKNGLSLLASIGASAPFIGLFGTVWGIMNAFIGIANLGNASLAVVA-PGIAEALFATAFG 208
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFAN 215
L +IP+ + YN + K ++ AN
Sbjct: 209 LIAAIPAVLFYNYLTRKNLKLMHHLDELAN 238
>gi|86151491|ref|ZP_01069706.1| TonB system transport protein ExbB [Campylobacter jejuni subsp.
jejuni 260.94]
gi|148926345|ref|ZP_01810029.1| biopolymer transport protein [Campylobacter jejuni subsp. jejuni
CG8486]
gi|315123780|ref|YP_004065784.1| TonB system transport protein ExbB [Campylobacter jejuni subsp.
jejuni ICDCCJ07001]
gi|85841838|gb|EAQ59085.1| TonB system transport protein ExbB [Campylobacter jejuni subsp.
jejuni 260.94]
gi|145844737|gb|EDK21842.1| biopolymer transport protein [Campylobacter jejuni subsp. jejuni
CG8486]
gi|315017502|gb|ADT65595.1| TonB system transport protein ExbB [Campylobacter jejuni subsp.
jejuni ICDCCJ07001]
Length = 253
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 104/210 (49%), Gaps = 14/210 (6%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
+++S+ +L+ VK +I +L +FSIL+W+V I K + F +++ S
Sbjct: 40 IELSLSSLYQNADEVVKGVIYILVLFSILAWAVFISKLMQFYFMKKNL---------DLS 90
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMS-EWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
++ + K LKN + + F +S E + +K I++RI+ + I++++
Sbjct: 91 IQKI-KELKNLNELDQTKDFAGVLSLEIQDELEKSEYKNDHIKERIELRLQNTISKQITA 149
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA--GYYSNNVVSIPGIIESLISILLG 185
LS L S+ ++ +G+ G V G+M F IA G S VV+ PGI E+L + G
Sbjct: 150 SKNGLSLLASIGASAPFIGLFGTVWGIMNAFIGIANLGNASLAVVA-PGIAEALFATAFG 208
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFAN 215
L +IP+ + YN + K ++ AN
Sbjct: 209 LIAAIPAVLFYNYLTRKNLKLMHHLDELAN 238
>gi|57237184|ref|YP_178196.1| TonB system transport protein ExbB [Campylobacter jejuni RM1221]
gi|57165988|gb|AAW34767.1| TonB system transport protein ExbB [Campylobacter jejuni RM1221]
gi|315057616|gb|ADT71945.1| Ferric siderophore transport system, biopolymer transport protein
ExbB [Campylobacter jejuni subsp. jejuni S3]
Length = 253
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 104/210 (49%), Gaps = 14/210 (6%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
+++S+ +L+ VK +I +L +FSIL+W+V I K + F +++ S
Sbjct: 40 IELSLSSLYQNADEVVKGVIYILVLFSILAWAVFISKLMQFYFMKKNL---------DLS 90
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMS-EWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
++ + K LKN + + F +S E + +K I++RI+ + I++++
Sbjct: 91 IQKI-KELKNLNELDQTKDFAGVLSLEIQDELEKSEYKNDHIKERIELRLQNTISKQITA 149
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA--GYYSNNVVSIPGIIESLISILLG 185
LS L S+ ++ +G+ G V G+M F IA G S VV+ PGI E+L + G
Sbjct: 150 SKNGLSLLASIGASAPFIGLFGTVWGIMNAFIGIANLGNASLAVVA-PGIAEALFATAFG 208
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFAN 215
L +IP+ + YN + K ++ AN
Sbjct: 209 LIAAIPAVLFYNYLTRKNLKLMHHLDELAN 238
>gi|57505753|ref|ZP_00371679.1| biopolymer transport protein Cj0179 [Campylobacter upsaliensis
RM3195]
gi|57016026|gb|EAL52814.1| biopolymer transport protein Cj0179 [Campylobacter upsaliensis
RM3195]
Length = 249
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 104/210 (49%), Gaps = 14/210 (6%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
+++S+ +L+ VK +I +L +FSIL+W+V I K + F +++ S
Sbjct: 36 IELSLSSLYQNADEVVKGVIYILVLFSILAWAVFISKLMQFYFMKKNL---------DLS 86
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMS-EWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
++ + K LKN + + F +S E + +K I++RI+ + I++++
Sbjct: 87 IQKI-KELKNLNELDQTKDFAGVLSLEIQDELEKSEYKNDHIKERIELRLQNTISKQITA 145
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA--GYYSNNVVSIPGIIESLISILLG 185
LS L S+ ++ +G+ G V G+M F IA G S VV+ PGI E+L + G
Sbjct: 146 SKNGLSLLASIGASAPFIGLFGTVWGIMNAFIGIANLGNASLAVVA-PGIAEALFATAFG 204
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFAN 215
L +IP+ + YN + K ++ AN
Sbjct: 205 LIAAIPAVLFYNYLTRKNLKLMHHLDELAN 234
>gi|91775230|ref|YP_544986.1| MotA/TolQ/ExbB proton channel [Methylobacillus flagellatus KT]
gi|91775374|ref|YP_545130.1| MotA/TolQ/ExbB proton channel [Methylobacillus flagellatus KT]
gi|91709217|gb|ABE49145.1| outer membrane transport energization protein ExbB [Methylobacillus
flagellatus KT]
gi|91709361|gb|ABE49289.1| outer membrane transport energization protein ExbB [Methylobacillus
flagellatus KT]
Length = 249
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 106/224 (47%), Gaps = 17/224 (7%)
Query: 17 FMQMGLAVKCIITLLFIF-SILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKS 75
F+ G V ++ ++ +F S+ SW +++ K +T+R RE+ FW S+E+ +
Sbjct: 12 FILDGGPVSILVAVVLVFMSVASWYLMVVKFYQALTIRSANREYSNSFWQASSIESALR- 70
Query: 76 LKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIG--IQDR------IDRMMDVAIARELEE 127
H+ G +S ++ + +S +G ++D I R M I+ E E
Sbjct: 71 ----HDSG--ETIVSRVANQAVDAAEHHQSHVGSNVEDACNKDEFIARAMRRQISAESER 124
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGL 186
+ L+ L S+ S VG+ G V G+ SI+ + + G + E+LI LGL
Sbjct: 125 LDYGLTMLASVGSVAPFVGLFGTVWGIYHALASISQSGQATLDKVAGPVGEALIMTALGL 184
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
V+IP+ +AYN + ++ ++E FAN+ +L+ N S
Sbjct: 185 AVAIPAVLAYNALVRRNRLILSEVEAFANDLHILLTTGAPLNPS 228
>gi|209522409|ref|ZP_03271017.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. H160]
gi|209497152|gb|EDZ97399.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. H160]
Length = 256
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 99/226 (43%), Gaps = 14/226 (6%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
M +YGLA ++ + + I+ +L I S+LSW+VII K I LRR R +
Sbjct: 1 MQHYGLA-------NVWDSGDIVTRGILCVLVIMSVLSWTVIIVKLWQLIRLRRVTRHSD 53
Query: 61 QLFWSGQSLETVCKSL----KNHHNIGLAAIFMSAM--SEWKKSCDKGARSPIGIQDRID 114
FWS + +L N H+ L A+ ++ + + + I + D I
Sbjct: 54 ARFWSADRFDDGLHALGHPESNAHDNPLLALALAGHEAATHHRQTQQHLHDRIDVSDWIT 113
Query: 115 RMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG 174
R + + + + L+ L S+ S VG+ G V G+ I ++ + G
Sbjct: 114 RRLQDTMDETIARLQSGLAILASIGSTAPFVGLFGTVWGIYHALIVIGETGQTSIDHVAG 173
Query: 175 II-ESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
+ ESLI GL V+IP+ + YN ++ +++ FA+ A
Sbjct: 174 PVGESLIMTAFGLFVAIPAVLGYNGLTRANRSIVARLKRFAHGLHA 219
>gi|167584779|ref|ZP_02377167.1| MotA/TolQ/ExbB proton channel [Burkholderia ubonensis Bu]
Length = 243
Score = 76.3 bits (186), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 96/230 (41%), Gaps = 22/230 (9%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
M +YG+A ++ Q + I L + SILSW VI+ K N I L R + E
Sbjct: 1 MQSYGIA-------HVWAQGDFVTRFIAIALLVMSILSWMVIVIKGWNVIRLNRLTKNAE 53
Query: 61 QLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRID------ 114
Q FW + K L + F++ K++ D ++ + DR+D
Sbjct: 54 QAFWHSDDFDDGIKKLGQAASTPSDNPFLALALAGKEAADHHHQTQPHLHDRMDVSDWIT 113
Query: 115 ----RMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
MD IAR + L+ L S+ S VG+ G V G+ I ++
Sbjct: 114 RCLKDTMDEGIAR----MQGGLAILASIGSTAPFVGLFGTVWGIYHALLVIGATGQTSID 169
Query: 171 SIPGII-ESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
+ G + ESLI GL V+IP+ + YN +K ++ FA+ A
Sbjct: 170 QVAGPVGESLIMTAFGLFVAIPAVLGYNALTRANKGVVSKLRRFAHGLHA 219
>gi|238028093|ref|YP_002912324.1| Biopolymer transport protein [Burkholderia glumae BGR1]
gi|237877287|gb|ACR29620.1| Biopolymer transport protein [Burkholderia glumae BGR1]
Length = 246
Score = 76.3 bits (186), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 104/231 (45%), Gaps = 24/231 (10%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
M +YG+A ++ Q + I +L + S+LSW VI+ K N I L R + +
Sbjct: 1 MQSYGIA-------HVWAQGDFVTRAIAIVLLVMSVLSWLVIVVKGWNAIRLGRLMKNAD 53
Query: 61 QLFWSGQSLETVCKSLKN-HHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRID----- 114
Q FW + + L++ N+ + A++ +++ + ++ + DR+D
Sbjct: 54 QAFWHSDEFDKGVQKLRDAAPNVQDNPLLALALAG-QEAAEHHQQTQPHLHDRMDVSEWI 112
Query: 115 -----RMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
MD ++AR + L+ L S+ S VG+ G V G+ +I ++
Sbjct: 113 TRCLKDTMDGSVAR----MQSGLAVLASIGSTAPFVGLFGTVWGIYHALLTIGATGQTSI 168
Query: 170 VSIPGII-ESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
+ G + ESLI GL V+IP+ + YN +K F ++ FA+ A
Sbjct: 169 DQVAGPVGESLIMTAFGLFVAIPAVLGYNALTRTNKGFVTKLRRFAHGLHA 219
>gi|82523891|emb|CAI78614.1| biopolymer transport proteins [uncultured delta proteobacterium]
Length = 203
Score = 76.3 bits (186), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 85/184 (46%), Gaps = 14/184 (7%)
Query: 54 RQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKK--SCDKGARSPIGIQ- 110
R+ +F FW+ +SL KN +A +F E + R + +
Sbjct: 7 RKSEKFTDAFWNSKSLAGAYNETKNLKESHIAEVFRHGYIELGRLLKVQDNDRDNLKTKS 66
Query: 111 --------DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA 162
D +DR + A+ E + ++ + FL + + +G+ G V G+M F IA
Sbjct: 67 ISKSMNWTDNLDRSLRRAMNNESQRLSRAIPFLATTGNTAPFIGLFGTVWGIMDSFHGIA 126
Query: 163 --GYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAI 220
G S VV+ PGI E+L++ GL +IP+ +AYN F+ + + ME F ++F I
Sbjct: 127 QKGNASLAVVA-PGIAEALVATAAGLIAAIPAVVAYNYFVTKLEGMNLDMEAFKDDFLNI 185
Query: 221 LSRQ 224
+ R+
Sbjct: 186 IRRE 189
>gi|53716290|ref|YP_106355.1| MotA/TolQ/ExbB proton channel family protein [Burkholderia mallei
ATCC 23344]
gi|67642803|ref|ZP_00441555.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
mallei GB8 horse 4]
gi|121596962|ref|YP_990399.1| MotA/TolQ/ExbB proton channel family protein [Burkholderia mallei
SAVP1]
gi|124382037|ref|YP_001024894.1| MotA/TolQ/ExbB proton channel family protein [Burkholderia mallei
NCTC 10229]
gi|126446944|ref|YP_001079235.1| MotA/TolQ/ExbB proton channel family protein [Burkholderia mallei
NCTC 10247]
gi|167002073|ref|ZP_02267863.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
mallei PRL-20]
gi|254176448|ref|ZP_04883106.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
mallei ATCC 10399]
gi|254203338|ref|ZP_04909699.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
mallei FMH]
gi|254205217|ref|ZP_04911570.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
mallei JHU]
gi|254356029|ref|ZP_04972306.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
mallei 2002721280]
gi|52422260|gb|AAU45830.1| MotA/TolQ/ExbB proton channel family protein [Burkholderia mallei
ATCC 23344]
gi|121224760|gb|ABM48291.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
mallei SAVP1]
gi|126239798|gb|ABO02910.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
mallei NCTC 10247]
gi|147745577|gb|EDK52656.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
mallei FMH]
gi|147754803|gb|EDK61867.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
mallei JHU]
gi|148025012|gb|EDK83181.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
mallei 2002721280]
gi|160697490|gb|EDP87460.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
mallei ATCC 10399]
gi|238524001|gb|EEP87436.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
mallei GB8 horse 4]
gi|243062230|gb|EES44416.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
mallei PRL-20]
gi|261826614|gb|ABN00385.2| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
mallei NCTC 10229]
Length = 242
Score = 76.3 bits (186), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 98/230 (42%), Gaps = 22/230 (9%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
M +YG+A ++ Q + I L + SILSW VI+ K N I L+R ++ E
Sbjct: 1 MQSYGIA-------HVWAQGDFVTRFIAIALLVMSILSWMVIVIKGWNVIRLKRLSKDAE 53
Query: 61 QLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRID------ 114
Q FW + L + F++ K++ D ++ ++DR+D
Sbjct: 54 QSFWHSDDFDEGVDKLGRASSSSQDNPFLALALSGKEAADHHHQTQPHLRDRMDVSDWVT 113
Query: 115 ----RMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
MD IAR + L+ L S+ S VG+ G V G+ I ++
Sbjct: 114 RCLKDTMDEGIAR----MQGGLAILASIGSTAPFVGLFGTVWGIYHALLVIGATGQTSID 169
Query: 171 SIPGII-ESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
+ G + ESLI GL V+IP+ + YN +K ++ FA+ A
Sbjct: 170 QVAGPVGESLIMTAFGLFVAIPAVLGYNALTRANKSVVSRLRRFAHGLHA 219
>gi|53721402|ref|YP_110387.1| bipolymer transport protein [Burkholderia pseudomallei K96243]
gi|126455682|ref|YP_001074558.1| MotA/TolQ/ExbB proton channel family protein [Burkholderia
pseudomallei 1106a]
gi|134282955|ref|ZP_01769657.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei 305]
gi|167722444|ref|ZP_02405680.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Burkholderia pseudomallei DM98]
gi|167741426|ref|ZP_02414200.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Burkholderia pseudomallei 14]
gi|167818609|ref|ZP_02450289.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Burkholderia pseudomallei 91]
gi|167826986|ref|ZP_02458457.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Burkholderia pseudomallei 9]
gi|167848501|ref|ZP_02474009.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Burkholderia pseudomallei B7210]
gi|167897053|ref|ZP_02484455.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Burkholderia pseudomallei 7894]
gi|167905437|ref|ZP_02492642.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Burkholderia pseudomallei NCTC 13177]
gi|167921671|ref|ZP_02508762.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Burkholderia pseudomallei BCC215]
gi|217424563|ref|ZP_03456061.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei 576]
gi|237508166|ref|ZP_04520881.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei MSHR346]
gi|242311243|ref|ZP_04810260.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei 1106b]
gi|254185301|ref|ZP_04891889.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei 1655]
gi|254187187|ref|ZP_04893701.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei Pasteur 52237]
gi|254198920|ref|ZP_04905338.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei S13]
gi|254262799|ref|ZP_04953664.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei 1710a]
gi|52211816|emb|CAH37815.1| putative bipolymer transport protein [Burkholderia pseudomallei
K96243]
gi|126229450|gb|ABN92863.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei 1106a]
gi|134245603|gb|EBA45695.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei 305]
gi|157934869|gb|EDO90539.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei Pasteur 52237]
gi|169657092|gb|EDS88486.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei S13]
gi|184209536|gb|EDU06579.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei 1655]
gi|217392487|gb|EEC32511.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei 576]
gi|235000371|gb|EEP49795.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei MSHR346]
gi|242134482|gb|EES20885.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei 1106b]
gi|254213801|gb|EET03186.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei 1710a]
Length = 242
Score = 76.3 bits (186), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 97/230 (42%), Gaps = 22/230 (9%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
M +YG+A ++ Q + I L + SILSW VI+ K N I L+R ++ E
Sbjct: 1 MQSYGIA-------HVWAQGDFVTRFIAIALLVMSILSWMVIVIKGWNVIRLKRLSKDAE 53
Query: 61 QLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRID------ 114
Q FW + L + F++ K++ D ++ + DR+D
Sbjct: 54 QSFWHSDDFDEGVDKLGRASSSSQDNPFLALALSGKEAADHHHQTQPHLHDRMDVSDWVT 113
Query: 115 ----RMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
MD IAR + L+ L S+ S VG+ G V G+ I ++
Sbjct: 114 RCLKDTMDEGIAR----MQGGLAILASIGSTAPFVGLFGTVWGIYHALLVIGATGQTSID 169
Query: 171 SIPGII-ESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
+ G + ESLI GL V+IP+ + YN +K ++ FA+ A
Sbjct: 170 QVAGPVGESLIMTAFGLFVAIPAVLGYNALTRANKSVVSRLRRFAHGLHA 219
>gi|320107205|ref|YP_004182795.1| MotA/TolQ/ExbB proton channel [Terriglobus saanensis SP1PR4]
gi|319925726|gb|ADV82801.1| MotA/TolQ/ExbB proton channel [Terriglobus saanensis SP1PR4]
Length = 262
Score = 76.3 bits (186), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 92/187 (49%), Gaps = 9/187 (4%)
Query: 35 SILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSE 94
SI SW+++I K F + Q + F + F L + L A+F E
Sbjct: 53 SIFSWTIMITKWQTFRKAQVQSQRFLRAFRKSTRLGEIATVADQFKPSPLVAVFTEIADE 112
Query: 95 WKKSCD-KG-ARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVL 152
+++ +G R+P G+ +R A + L + +L++L ++++A +G+ G V+
Sbjct: 113 YQRQTGGRGLPRNPQGL----ERAAQTAASEALSGMESRLTWLATIAAAAPFIGLFGTVM 168
Query: 153 GMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQM 210
G++ F + AG + V+ PGI E+LI+ GL V++P+ + YN+F + +M
Sbjct: 169 GIIDAFHGLGTAGAATLRAVA-PGISEALITTAAGLVVAVPALVGYNQFAARLRDMGGRM 227
Query: 211 EGFANEF 217
+ FA E
Sbjct: 228 DDFAREL 234
>gi|303248658|ref|ZP_07334912.1| MotA/TolQ/ExbB proton channel [Desulfovibrio fructosovorans JJ]
gi|302489914|gb|EFL49840.1| MotA/TolQ/ExbB proton channel [Desulfovibrio fructosovorans JJ]
Length = 248
Score = 76.3 bits (186), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 108/215 (50%), Gaps = 13/215 (6%)
Query: 20 MGLAVKCIITLLFIFSILS---WSVIIQKSVNFITLRRQF-REFEQLFWSGQSLETVCKS 75
M A +I +L + ++S WS+I K + +R+ R+F++ F +L + +S
Sbjct: 14 MANATPTVIFVLCVLGVMSLGCWSIIFVKIFTLTSAKRETARDFDR-FQEADTLRSAMQS 72
Query: 76 LKNHH-----NIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
L N+G A F + + D + I + D I R++ +++EL +++
Sbjct: 73 LGQSRQSPAFNVGRLA-FEELVRMEQADLDPAEKGHIAM-DNIRRVLRQGVSQELAKLSS 130
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCVS 189
L FL + ++A +G+ G V G+M F SI S + ++ PGI E+LI+ +GL V+
Sbjct: 131 SLPFLATSANATPFIGLFGTVWGIMNSFHSIGLMQSAALAAVAPGISEALIATAIGLAVA 190
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
IP+ I+YN F+ + ++ FA F + R+
Sbjct: 191 IPAVISYNFFLGYIQAIEGELVNFAGAFLNRIQRE 225
>gi|146343118|ref|YP_001208166.1| biopolymer transport protein [Bradyrhizobium sp. ORS278]
gi|146195924|emb|CAL79951.1| biopolymer transport protein [Bradyrhizobium sp. ORS278]
Length = 325
Score = 76.3 bits (186), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 99/202 (49%), Gaps = 13/202 (6%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQ----FREFEQLFWS 65
D+S +++F+ + VK ++ L + S+ +W+V I K+V F LRR+ R+ + + W
Sbjct: 83 DLSPWSMFLAADILVKSVMMGLALASLATWTVFIAKTVEFAILRRKLRSALRKVDDVRW- 141
Query: 66 GQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
L +L + ++ L + +AM E + S + P G+ +R + E
Sbjct: 142 ---LSEAKLALGSKQSV-LTVLIDAAMHEIRMSSEL---PPHGVNERAASSFAEIVRAEG 194
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILL 184
+ L ++ S VG+ G V G+M F I+ + N+ V PGI E+L++ +
Sbjct: 195 RRCRTGMGLLATIGSISPFVGLFGTVWGIMNSFIGISKSQTTNLAVVAPGIAEALLATAI 254
Query: 185 GLCVSIPSSIAYNKFIEDSKKF 206
GL +IP+ I YN F +K +
Sbjct: 255 GLVAAIPAVIIYNHFTRVTKGY 276
>gi|115352289|ref|YP_774128.1| MotA/TolQ/ExbB proton channel [Burkholderia ambifaria AMMD]
gi|115282277|gb|ABI87794.1| outer membrane transport energization protein ExbB [Burkholderia
ambifaria AMMD]
Length = 243
Score = 76.3 bits (186), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 95/226 (42%), Gaps = 14/226 (6%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
M +YG+A ++ Q + I L + S+LSW VII K N I L R + E
Sbjct: 1 MQSYGIA-------HVWAQGDFVTRAIAITLLVMSVLSWIVIIVKGWNVIRLNRLTKNAE 53
Query: 61 QLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRID------ 114
Q FW + K L + F++ K++ D ++ + DR+D
Sbjct: 54 QAFWHSDDFDDGIKKLGLTASTPSDNPFLALALSGKEAADHHHQTQPHLHDRMDVSDWVT 113
Query: 115 RMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG 174
R + + + + L+ L S+ S VG+ G V G+ I ++ + G
Sbjct: 114 RCLKDTMDEGISRMQAGLAILASIGSTAPFVGLFGTVWGIYHALLVIGATGQTSIDQVAG 173
Query: 175 II-ESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
+ ESLI GL V+IP+ + YN +K ++ FA+ A
Sbjct: 174 PVGESLIMTAFGLFVAIPAVLGYNALTRANKGVVSKLRRFAHGLHA 219
>gi|126442436|ref|YP_001061618.1| MotA/TolQ/ExbB proton channel family protein [Burkholderia
pseudomallei 668]
gi|126221927|gb|ABN85432.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei 668]
Length = 242
Score = 76.3 bits (186), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 96/226 (42%), Gaps = 14/226 (6%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
M +YG+A ++ Q + I L + SILSW VI+ K N I L+R ++ E
Sbjct: 1 MQSYGIA-------HVWAQGDFVTRFIAIALLVMSILSWMVIVIKGWNVIRLKRLSKDAE 53
Query: 61 QLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRID------ 114
Q FW + L + F++ K++ D ++ + DR+D
Sbjct: 54 QSFWHSDDFDEGVDKLGRASSSSQDNPFLALALSGKEAADHHHQTQPHLHDRMDVSDWVT 113
Query: 115 RMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG 174
R + + + + L+ L S+ S VG+ G V G+ I ++ + G
Sbjct: 114 RCLKDTMDERIARMQGGLAILASIGSTAPFVGLFGTVWGIYHALLVIGATGQTSIDQVAG 173
Query: 175 II-ESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
+ ESLI GL V+IP+ + YN +K ++ FA+ A
Sbjct: 174 PVGESLIMTAFGLFVAIPAVLGYNALTRANKSVVSRLRRFAHGLHA 219
>gi|163857006|ref|YP_001631304.1| biopolymer transport ExbB protein [Bordetella petrii DSM 12804]
gi|163260734|emb|CAP43036.1| biopolymer transport ExbB protein [Bordetella petrii]
Length = 321
Score = 76.3 bits (186), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 102/211 (48%), Gaps = 21/211 (9%)
Query: 25 KCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNH----- 79
K + +L + S+++W +I+ K +N + +RR+ +F FW+ SLE V + H
Sbjct: 91 KALFAILIVMSLVTWYLILVKFINNVRMRRRSADFLNKFWNSSSLEQVENEIVTHGARDP 150
Query: 80 --HNIGLAAIFMSAMSEW--KKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFL 135
H A + +++ K + GA + R M I E ++ L+ L
Sbjct: 151 FSHLTSHAMHAQAHHAKFGATKLEETGANGEF-----VTRTMRKVIDEETAKLENGLTVL 205
Query: 136 GSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII----ESLISILLGLCVSIP 191
S+ S VG+ G V G+ + ++ G + V+I I E+LI LGL V+IP
Sbjct: 206 ASVGSTAPFVGLFGTVWGV---YHALVGIGLADGVTINRIAGPVGEALIMTGLGLAVAIP 262
Query: 192 SSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
+ +AYN F+ ++ F +++ FA++ A LS
Sbjct: 263 AVLAYNAFVRGNRVFLSRLDAFAHDLFAFLS 293
>gi|170719354|ref|YP_001747042.1| tonB-system energizer ExbB [Pseudomonas putida W619]
gi|169757357|gb|ACA70673.1| tonB-system energizer ExbB [Pseudomonas putida W619]
Length = 323
Score = 76.3 bits (186), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 101/217 (46%), Gaps = 6/217 (2%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFR-EFEQLFWSGQS 68
D+S + ++ + VK ++ L I SI++W++ I K + +R+ R E QL S
Sbjct: 94 DLSPWGMYKNADVVVKAVMIGLAIASIITWTIWIAKGFELMGAKRRLRGEIAQLKKSASL 153
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
E + N + A+ E + S + AR GI++R+ ++ + +
Sbjct: 154 KE--ASEVSNKEGTLAHTLVHDALEEMRLSAN--AREKEGIKERVSFRLERLVHASGRNM 209
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
+ L ++ S VG+ G V G+M F IA + N+ V PGI E+L++ LGL
Sbjct: 210 SSGTGVLATIGSTAPFVGLFGTVWGIMNSFIGIAKTQTTNLAVVAPGIAEALLATALGLV 269
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+IP+ + YN F + Q+ + + ++SR
Sbjct: 270 AAIPAVVIYNVFARSIAGYKAQVSDASAQVLLLVSRD 306
>gi|165924876|ref|ZP_02220708.1| tonB-system energizer ExbB [Yersinia pestis biovar Orientalis str.
F1991016]
gi|167398853|ref|ZP_02304377.1| tonB-system energizer ExbB [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|165923076|gb|EDR40227.1| tonB-system energizer ExbB [Yersinia pestis biovar Orientalis str.
F1991016]
gi|167051357|gb|EDR62765.1| tonB-system energizer ExbB [Yersinia pestis biovar Antiqua str.
UG05-0454]
Length = 332
Score = 76.3 bits (186), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 106/210 (50%), Gaps = 4/210 (1%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
MD+S++ ++ + VK ++ L + SI++W+++ K RR+ R+ ++ +
Sbjct: 96 MDLSVWGMYQNADVVVKGVMIGLVLASIVTWTILFSKGTELFRARRRLRQEHEVIGAVTD 155
Query: 69 LETVCKSLKNHHNIGLAAIFM-SAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
L+T + ++ ++++ + A++E S + + GI++R ++ +A +
Sbjct: 156 LDTASERAEDFGQGSVSSLLLHEALNERLLSIESNDNN--GIKERTAFRLERRVAAIGRQ 213
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ + FL ++ + VG+ G V G+M F IA + N+ I PGI E+L++ LGL
Sbjct: 214 MGKGNGFLATIGAISPFVGLFGTVWGIMNSFIGIAHSQTTNLAVIAPGIAEALLATALGL 273
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANE 216
+IP+ + YN F + Q+ A +
Sbjct: 274 VAAIPAVVIYNIFARQIGNYRAQVGDVAAQ 303
>gi|307130417|ref|YP_003882433.1| MotA/TolQ/ExbB proton channel family protein [Dickeya dadantii
3937]
gi|306527946|gb|ADM97876.1| MotA/TolQ/ExbB proton channel family protein [Dickeya dadantii
3937]
Length = 232
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 106/200 (53%), Gaps = 6/200 (3%)
Query: 27 IITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAA 86
+I LL FS+++WS+ + K + RR+ ++F QLFW ++++ + + H LA
Sbjct: 15 VILLLLFFSLVTWSIGLLKLAQYARQRRRNQQFRQLFWQQENIDAALRDVA--HPGALAN 72
Query: 87 IFMSAMSEWKKSCDKGARSPIG-IQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLV 145
+ + ++ D+ +PI +QDR++R + I RE + L+ L S+ + +
Sbjct: 73 LARATQLTLERVKDR--ITPIAHLQDRVERALQQQIQRERRTLENGLALLASIGTTSPFI 130
Query: 146 GILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCVSIPSSIAYNKFIEDSK 204
G+ G V G+M Q+I S ++ ++ G I +LI+ +G+ V++P+ + YN F+ K
Sbjct: 131 GLFGTVWGIMAALQTIGQSGSASLDTVAGPIGNALIATGIGIAVAVPAVLIYNYFLRRLK 190
Query: 205 KFAMQMEGFANEFSAILSRQ 224
M+ FA++ ++ Q
Sbjct: 191 LEVADMDDFAHDIYSVAQAQ 210
>gi|167913730|ref|ZP_02500821.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Burkholderia pseudomallei 112]
gi|254296819|ref|ZP_04964273.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei 406e]
gi|157806604|gb|EDO83774.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei 406e]
Length = 242
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 97/230 (42%), Gaps = 22/230 (9%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
M +YG+A ++ Q + I L + SILSW VI+ K N I L+R ++ E
Sbjct: 1 MQSYGIA-------HVWAQGDFVTRFIAIALLVMSILSWMVIVIKGWNVIRLKRLSKDAE 53
Query: 61 QLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRID------ 114
Q FW + L + F++ K++ D ++ + DR+D
Sbjct: 54 QSFWHSDDFDEGVDKLGRASSSSQDNPFLALALSGKEAADHHHQTQPHLHDRMDVSDWVT 113
Query: 115 ----RMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
MD IAR + L+ L S+ S VG+ G V G+ I ++
Sbjct: 114 RCLKDTMDEGIAR----MQGGLAILASIGSTAPFVGLFGTVWGIYHALLMIGATGQTSID 169
Query: 171 SIPGII-ESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
+ G + ESLI GL V+IP+ + YN +K ++ FA+ A
Sbjct: 170 QVAGPVGESLIMTAFGLFVAIPAVLGYNALTRANKSVVSRLRRFAHGLHA 219
>gi|329851101|ref|ZP_08265858.1| exbB [Asticcacaulis biprosthecum C19]
gi|328839947|gb|EGF89519.1| exbB [Asticcacaulis biprosthecum C19]
Length = 289
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 107/228 (46%), Gaps = 15/228 (6%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D++ ++F + VK ++ LL + S+ SW ++I K ++F +L R F + + +S+
Sbjct: 63 DVNFVSMFSGATIVVKIVMILLVVMSLFSWILLIMKLLDFSSLNRVSSNFLEAYRGARSI 122
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQ----------DRIDRMMDV 119
+ + + G M+A+ + K A G+Q R + +
Sbjct: 123 ADINRIAVSDEFAGNPLADMAAVGTEEVQLSKQA----GLQVSGEHRDSTLSRAEASIHA 178
Query: 120 AIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIES 178
A + ++ LSFL + S +G+ G V G+M F IA + N+ V PGI E+
Sbjct: 179 VQAGLAKRLSGGLSFLATTGSTSPFIGLFGTVYGIMNSFIGIANSNTTNLAVVAPGIAEA 238
Query: 179 LISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
L++ +GL +IP+ + YN F + ++ E F +E LSRQ +
Sbjct: 239 LMATGIGLIAAIPAVVMYNIFNTSISNYGIRSEQFVSELMNSLSRQLD 286
>gi|170702371|ref|ZP_02893263.1| MotA/TolQ/ExbB proton channel [Burkholderia ambifaria IOP40-10]
gi|170132730|gb|EDT01166.1| MotA/TolQ/ExbB proton channel [Burkholderia ambifaria IOP40-10]
Length = 243
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 95/226 (42%), Gaps = 14/226 (6%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
M +YG+A ++ Q + I L + S+LSW VII K N I L R + E
Sbjct: 1 MQSYGIA-------HVWAQGDFVTRAIAITLLVMSVLSWIVIIVKGWNVIRLNRLTKNAE 53
Query: 61 QLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRID------ 114
Q FW + K L + F++ K++ D ++ + DR+D
Sbjct: 54 QAFWHSDDFDDGIKKLGLTASTPNDNPFLALALSGKEAADHHHQTQPHLHDRMDVSDWVT 113
Query: 115 RMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG 174
R + + + + L+ L S+ S VG+ G V G+ I ++ + G
Sbjct: 114 RCLKDTMDEGISRMQAGLAILASIGSTAPFVGLFGTVWGIYHALLVIGATGQTSIDQVAG 173
Query: 175 II-ESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
+ ESLI GL V+IP+ + YN +K ++ FA+ A
Sbjct: 174 PVGESLIMTAFGLFVAIPAVLGYNALTRANKGVVSKLRRFAHGLHA 219
>gi|303246170|ref|ZP_07332451.1| MotA/TolQ/ExbB proton channel [Desulfovibrio fructosovorans JJ]
gi|302492566|gb|EFL52437.1| MotA/TolQ/ExbB proton channel [Desulfovibrio fructosovorans JJ]
Length = 235
Score = 75.9 bits (185), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 91/193 (47%), Gaps = 2/193 (1%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
MD ++ Q K ++ LL + S++SW+VI K + +R S
Sbjct: 1 MDSTLLQALSQATGVAKAVLALLVVMSVVSWTVIYWKWRSLTVAKRGVSRLTGQILEADS 60
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
L ++ + ++ E+ K G + + D + R++ IA E+ +
Sbjct: 61 LAEAAAAIDALAGPSIRSMASLGFKEFTKLSLSGDAEKL-VSDNVRRILHHGIAEEMRGL 119
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLC 187
+ L L ++A +G+ G V G+M F +I S ++ ++ PGI E+LI+ +GL
Sbjct: 120 SRALPLLAIAANAAPFIGLFGTVWGIMHSFHAIGQMQSASLATVAPGISEALIATAVGLA 179
Query: 188 VSIPSSIAYNKFI 200
V+IP+S+AYN F+
Sbjct: 180 VAIPASVAYNMFL 192
>gi|83716181|ref|YP_440218.1| MotA/TolQ/ExbB proton channel family protein [Burkholderia
thailandensis E264]
gi|83650006|gb|ABC34070.1| MotA/TolQ/ExbB proton channel family protein [Burkholderia
thailandensis E264]
Length = 233
Score = 75.9 bits (185), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 95/220 (43%), Gaps = 26/220 (11%)
Query: 16 LFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKS 75
++ Q + I L + SILSW VI+ K N I L+R ++ EQ FW + K
Sbjct: 1 MWAQGDFVTRSIAIALLVMSILSWMVIVIKGWNVIRLKRLSKDAEQSFWHSDDFDEGVKK 60
Query: 76 LKNHHNIGLAA-----IFMSAMSEWKKSCDKGARSPIGIQDRID----------RMMDVA 120
L GLA+ F++ K++ D ++ + DR+D MD
Sbjct: 61 L------GLASSSQDNPFLALALSGKEAADHHHQTQPHLHDRMDVSDWVTRCLKDTMDEG 114
Query: 121 IARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESL 179
IAR + L+ L S+ S VG+ G V G+ I ++ + G + ESL
Sbjct: 115 IAR----MQGGLAILASIGSTAPFVGLFGTVWGIYHALLVIGATGQTSIDQVAGPVGESL 170
Query: 180 ISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
I GL V+IP+ + YN +K ++ FA+ A
Sbjct: 171 IMTAFGLFVAIPAVLGYNALTRANKSVVSRLRRFAHGLHA 210
>gi|162419125|ref|YP_001604886.1| tonB-system energizer ExbB [Yersinia pestis Angola]
gi|162351940|gb|ABX85888.1| tonB-system energizer ExbB [Yersinia pestis Angola]
Length = 330
Score = 75.9 bits (185), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 106/210 (50%), Gaps = 4/210 (1%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
MD+S++ ++ + VK ++ L + SI++W+++ K RR+ R+ ++ +
Sbjct: 94 MDLSVWGMYQNADVVVKGVMIGLVLASIVTWTILFSKGTELFRARRRLRQEHEVIGAVTD 153
Query: 69 LETVCKSLKNHHNIGLAAIFM-SAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
L+T + ++ ++++ + A++E S + + GI++R ++ +A +
Sbjct: 154 LDTASERAEDFGQGSVSSLLLHEALNERLLSIESNDNN--GIKERTAFRLERRVAAIGRQ 211
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ + FL ++ + VG+ G V G+M F IA + N+ I PGI E+L++ LGL
Sbjct: 212 MGKGNGFLATIGAISPFVGLFGTVWGIMNSFIGIAHSQTTNLAVIAPGIAEALLATALGL 271
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANE 216
+IP+ + YN F + Q+ A +
Sbjct: 272 VAAIPAVVIYNIFARQIGNYRAQVGDVAAQ 301
>gi|121591677|ref|ZP_01678911.1| tolQ protein [Vibrio cholerae 2740-80]
gi|121546462|gb|EAX56686.1| tolQ protein [Vibrio cholerae 2740-80]
Length = 165
Score = 75.9 bits (185), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 72/143 (50%), Gaps = 1/143 (0%)
Query: 83 GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAG 142
G+ IF + +E+ + +P + + R M VA+ARE++ + L FL ++ S
Sbjct: 17 GIEEIFYAGFTEFARLRKTNPGAPDFVMEGTGRAMRVAVAREVDSLETSLPFLATVGSIS 76
Query: 143 LLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCVSIPSSIAYNKFIE 201
+G+ G V G+M F ++ + + PGI E+LI+ +GL +IP+ +AYN+
Sbjct: 77 PYIGLFGTVWGIMHAFIALGEVKQATLAMVAPGIAEALIATAIGLFAAIPAVMAYNRLSN 136
Query: 202 DSKKFAMQMEGFANEFSAILSRQ 224
K F+ EF IL RQ
Sbjct: 137 KVSKLEHTYATFSEEFHTILHRQ 159
>gi|154248193|ref|YP_001419151.1| TonB-system energizer ExbB type-1 [Xanthobacter autotrophicus Py2]
gi|154162278|gb|ABS69494.1| TonB-system energizer ExbB type-1 [Xanthobacter autotrophicus Py2]
Length = 327
Score = 75.9 bits (185), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 103/214 (48%), Gaps = 10/214 (4%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S + +FM L VK ++ L S+++W+V KS+ + RR + +L
Sbjct: 98 DLSPWGMFMAADLVVKAVMVGLAFASLVTWTVWFAKSLELVFARRAVARTLDALQAAPTL 157
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPI-GIQDRIDRMMDVAIARELEEI 128
++ A + +A++EWK S +G P+ GI++R+ + AR +
Sbjct: 158 FDAAAAMPKDRGAAPATV-KAALAEWKVS--EGL--PVEGIKERVAVALSRIEARAGRRL 212
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
+ L ++ + VG+ G V G+M F I+ + N+ V PGI E+L++ LGL
Sbjct: 213 SGGTGVLATIGATAPFVGLFGTVWGIMNAFIGISRAQTTNLAVVAPGIAEALLATALGLV 272
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+IP+ + YN F ++ A Q A+ + ++
Sbjct: 273 AAIPAVVIYNLF---ARAIAAQKARLADTSAEVM 303
>gi|22127369|ref|NP_670792.1| TonB complex protein [Yersinia pestis KIM 10]
gi|45442759|ref|NP_994298.1| TonB complex protein [Yersinia pestis biovar Microtus str. 91001]
gi|21960454|gb|AAM87043.1|AE013952_10 TonB complex protein [Yersinia pestis KIM 10]
gi|45437625|gb|AAS63175.1| TonB complex protein [Yersinia pestis biovar Microtus str. 91001]
Length = 353
Score = 75.9 bits (185), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 106/210 (50%), Gaps = 4/210 (1%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
MD+S++ ++ + VK ++ L + SI++W+++ K RR+ R+ ++ +
Sbjct: 117 MDLSVWGMYQNADVVVKGVMIGLVLASIVTWTILFSKGTELFRARRRLRQEHEVIGAVTD 176
Query: 69 LETVCKSLKNHHNIGLAAIFM-SAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
L+T + ++ ++++ + A++E S + + GI++R ++ +A +
Sbjct: 177 LDTASERAEDFGQGSVSSLLLHEALNERLLSIESNDNN--GIKERTAFRLERRVAAIGRQ 234
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ + FL ++ + VG+ G V G+M F IA + N+ I PGI E+L++ LGL
Sbjct: 235 MGKGNGFLATIGAISPFVGLFGTVWGIMNSFIGIAHSQTTNLAVIAPGIAEALLATALGL 294
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANE 216
+IP+ + YN F + Q+ A +
Sbjct: 295 VAAIPAVVIYNIFARQIGNYRAQVGDVAAQ 324
>gi|187478612|ref|YP_786636.1| biopolymer transport protein [Bordetella avium 197N]
gi|115423198|emb|CAJ49729.1| biopolymer transport protein [Bordetella avium 197N]
Length = 304
Score = 75.9 bits (185), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 104/208 (50%), Gaps = 15/208 (7%)
Query: 25 KCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNH----- 79
K + +L + S+++W +I+ K+++ +++R++ F FW+ SL+ V + H
Sbjct: 74 KALFVILILMSLVTWYLIVVKTLSNLSMRKRAANFLNHFWNASSLKQVENEIVTHGARDP 133
Query: 80 -HNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSM 138
++ + AI A S K + + R M I E ++ L+ L S+
Sbjct: 134 FSHLAIHAI--HAQSHHAKFGATKLEEAGSNGEFVTRTMRKVIDEETAKLENGLTVLASV 191
Query: 139 SSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII----ESLISILLGLCVSIPSSI 194
S VG+ G V G+ + ++ G ++ V+I I E+LI LGL V+IP+ +
Sbjct: 192 GSTAPFVGLFGTVWGV---YHALVGIGLSDGVTINRIAGPVGEALIMTGLGLAVAIPAVL 248
Query: 195 AYNKFIEDSKKFAMQMEGFANEFSAILS 222
AYN F+ +++ F +++ FA++ A L+
Sbjct: 249 AYNAFVRNNRVFLSRLDAFAHDLFAFLT 276
>gi|82702177|ref|YP_411743.1| MotA/TolQ/ExbB proton channel [Nitrosospira multiformis ATCC 25196]
gi|82410242|gb|ABB74351.1| outer membrane transport energization protein ExbB [Nitrosospira
multiformis ATCC 25196]
Length = 254
Score = 75.9 bits (185), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 108/207 (52%), Gaps = 7/207 (3%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIG-- 83
++ LL S+ SW +I+ K ++ I ++ F + FWS SL+ V +LK +
Sbjct: 20 TVLILLLALSVASWYLILTKGISNIMAGKRADAFLKRFWSAGSLQEVNSTLKEDADDNAF 79
Query: 84 --LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSA 141
LA + M+A ++ +K + + G + I R++ + +E ++ L+ + S SA
Sbjct: 80 AQLARLAMNAAADSEKHGLQNLAAAGGASEFITRVLRNGLDQEAAQVENGLTVIASAGSA 139
Query: 142 GLLVGILGAVLGM-MGFFQ-SIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKF 199
+G+ G V G+ Q ++G + + V+ P + E+LI LGL V+IP+ +AYN F
Sbjct: 140 APYIGLFGTVWGIYHALIQIGLSGQGTLDKVAGP-VGEALIMTALGLAVAIPAVLAYNTF 198
Query: 200 IEDSKKFAMQMEGFANEFSAILSRQTE 226
++ + +++ FA++ +++ T+
Sbjct: 199 GRRNRIWLARLDAFAHDLFVLITVGTK 225
>gi|330964940|gb|EGH65200.1| TonB system transport protein ExbB [Pseudomonas syringae pv.
actinidiae str. M302091]
Length = 230
Score = 75.9 bits (185), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 100/201 (49%), Gaps = 10/201 (4%)
Query: 22 LAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHN 81
L + +TLL IFS+++W++++ K++ L RQ R + FW+ + L+ +L H+
Sbjct: 8 LITQSSMTLLVIFSLVTWALLLGKTLQHWRLSRQNRRYSTQFWAARDLK---NALHLPHS 64
Query: 82 IG----LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGS 137
G L A++ S D G QD ++R + I +E + + L S
Sbjct: 65 EGSLARLTDAGAQALATPHDSPDLG--HSWNRQDLLERSLRQQIHKERRRLESGMILLAS 122
Query: 138 MSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCVSIPSSIAY 196
+ S +G+ G V G++ +I+ S ++ + G I ++L++ +G+ V++P+ +AY
Sbjct: 123 IGSTAPFIGLFGTVFGIIHALTAISQAKSASIAVVAGPIGDALVATGVGIAVAVPAVLAY 182
Query: 197 NKFIEDSKKFAMQMEGFANEF 217
N F K +E FA +F
Sbjct: 183 NFFGRRMKLVIADLEEFAVDF 203
>gi|108809101|ref|YP_653017.1| MotA/TolQ/ExbB proton channel family protein [Yersinia pestis
Antiqua]
gi|108810704|ref|YP_646471.1| MotA/TolQ/ExbB proton channel family protein [Yersinia pestis
Nepal516]
gi|150260288|ref|ZP_01917016.1| MotA/TolQ/ExbB proton channel family protein [Yersinia pestis
CA88-4125]
gi|165939887|ref|ZP_02228426.1| tonB-system energizer ExbB [Yersinia pestis biovar Orientalis str.
IP275]
gi|166008741|ref|ZP_02229639.1| tonB-system energizer ExbB [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166212089|ref|ZP_02238124.1| tonB-system energizer ExbB [Yersinia pestis biovar Antiqua str.
B42003004]
gi|167419105|ref|ZP_02310858.1| tonB-system energizer ExbB [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167425209|ref|ZP_02316962.1| tonB-system energizer ExbB [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|167466386|ref|ZP_02331090.1| TonB complex protein [Yersinia pestis FV-1]
gi|229837364|ref|ZP_04457527.1| membrane spanning protein in TonB-ExbB-ExbD complex [Yersinia
pestis Pestoides A]
gi|229840576|ref|ZP_04460735.1| membrane spanning protein in TonB-ExbB-ExbD complex [Yersinia
pestis biovar Orientalis str. PEXU2]
gi|229842874|ref|ZP_04463026.1| membrane spanning protein in TonB-ExbB-ExbD complex [Yersinia
pestis biovar Orientalis str. India 195]
gi|229900902|ref|ZP_04516026.1| membrane spanning protein in TonB-ExbB-ExbD complex [Yersinia
pestis Nepal516]
gi|270487724|ref|ZP_06204798.1| TonB-system energizer ExbB [Yersinia pestis KIM D27]
gi|108774352|gb|ABG16871.1| MotA/TolQ/ExbB proton channel family protein [Yersinia pestis
Nepal516]
gi|108781014|gb|ABG15072.1| MotA/TolQ/ExbB proton channel family protein [Yersinia pestis
Antiqua]
gi|149289696|gb|EDM39773.1| MotA/TolQ/ExbB proton channel family protein [Yersinia pestis
CA88-4125]
gi|165912198|gb|EDR30836.1| tonB-system energizer ExbB [Yersinia pestis biovar Orientalis str.
IP275]
gi|165992080|gb|EDR44381.1| tonB-system energizer ExbB [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166206835|gb|EDR51315.1| tonB-system energizer ExbB [Yersinia pestis biovar Antiqua str.
B42003004]
gi|166963099|gb|EDR59120.1| tonB-system energizer ExbB [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167055972|gb|EDR65753.1| tonB-system energizer ExbB [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|229682241|gb|EEO78333.1| membrane spanning protein in TonB-ExbB-ExbD complex [Yersinia
pestis Nepal516]
gi|229690141|gb|EEO82198.1| membrane spanning protein in TonB-ExbB-ExbD complex [Yersinia
pestis biovar Orientalis str. India 195]
gi|229696942|gb|EEO86989.1| membrane spanning protein in TonB-ExbB-ExbD complex [Yersinia
pestis biovar Orientalis str. PEXU2]
gi|229705487|gb|EEO91497.1| membrane spanning protein in TonB-ExbB-ExbD complex [Yersinia
pestis Pestoides A]
gi|262360780|gb|ACY57501.1| MotA/TolQ/ExbB proton channel family protein [Yersinia pestis
D106004]
gi|262364725|gb|ACY61282.1| MotA/TolQ/ExbB proton channel family protein [Yersinia pestis
D182038]
gi|270336228|gb|EFA47005.1| TonB-system energizer ExbB [Yersinia pestis KIM D27]
Length = 345
Score = 75.9 bits (185), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 106/210 (50%), Gaps = 4/210 (1%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
MD+S++ ++ + VK ++ L + SI++W+++ K RR+ R+ ++ +
Sbjct: 109 MDLSVWGMYQNADVVVKGVMIGLVLASIVTWTILFSKGTELFRARRRLRQEHEVIGAVTD 168
Query: 69 LETVCKSLKNHHNIGLAAIFM-SAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
L+T + ++ ++++ + A++E S + + GI++R ++ +A +
Sbjct: 169 LDTASERAEDFGQGSVSSLLLHEALNERLLSIESNDNN--GIKERTAFRLERRVAAIGRQ 226
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ + FL ++ + VG+ G V G+M F IA + N+ I PGI E+L++ LGL
Sbjct: 227 MGKGNGFLATIGAISPFVGLFGTVWGIMNSFIGIAHSQTTNLAVIAPGIAEALLATALGL 286
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANE 216
+IP+ + YN F + Q+ A +
Sbjct: 287 VAAIPAVVIYNIFARQIGNYRAQVGDVAAQ 316
>gi|74316730|ref|YP_314470.1| MotA/TolQ/ExbB proton channel family protein [Thiobacillus
denitrificans ATCC 25259]
gi|74056225|gb|AAZ96665.1| MotA/TolQ/ExbB proton channel family protein [Thiobacillus
denitrificans ATCC 25259]
Length = 250
Score = 75.9 bits (185), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 109/220 (49%), Gaps = 16/220 (7%)
Query: 14 FALFMQM--GLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLET 71
FA F+ GLA ++ +L S+++W++I+ KSV +++ R F FW+ L
Sbjct: 11 FAHFIAQADGLA-HFLLVVLLAMSVVTWTLIVAKSVGNWRMKQHARAFLAHFWNAPGLPA 69
Query: 72 VCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQ----DRIDRMMDVAIARELEE 127
V L+ H G+ F K+ ++ R+ G + D + A+ R + +
Sbjct: 70 VADHLQKH---GVKDPFSHLTHHGLKAAEQ-YRNRSGQRLIESGSEDEFLTRALRRAINQ 125
Query: 128 ITEKLSF----LGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISI 182
T +L + L S++S+ VG+ G V G+ +I S ++ + G + E+LI
Sbjct: 126 DTARLEYGHTMLASIASSAPFVGLFGTVWGIYHALVNIGMSGSGSLDQVAGPVGEALIMT 185
Query: 183 LLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
LGL V+IP+ +AYN F ++ +++GFA++ A +S
Sbjct: 186 ALGLAVAIPAVLAYNFFNRARREMLSEVDGFAHDLFAFMS 225
>gi|294502748|ref|YP_003566810.1| MotA/TolQ/ExbB proton channel family protein [Yersinia pestis
Z176003]
gi|294353207|gb|ADE63548.1| MotA/TolQ/ExbB proton channel family protein [Yersinia pestis
Z176003]
Length = 343
Score = 75.9 bits (185), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 106/210 (50%), Gaps = 4/210 (1%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
MD+S++ ++ + VK ++ L + SI++W+++ K RR+ R+ ++ +
Sbjct: 107 MDLSVWGMYQNADVVVKGVMIGLVLASIVTWTILFSKGTELFRARRRLRQEHEVIGAVTD 166
Query: 69 LETVCKSLKNHHNIGLAAIFM-SAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
L+T + ++ ++++ + A++E S + + GI++R ++ +A +
Sbjct: 167 LDTASERAEDFGQGSVSSLLLHEALNERLLSIESNDNN--GIKERTAFRLERRVAAIGRQ 224
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ + FL ++ + VG+ G V G+M F IA + N+ I PGI E+L++ LGL
Sbjct: 225 MGKGNGFLATIGAISPFVGLFGTVWGIMNSFIGIAHSQTTNLAVIAPGIAEALLATALGL 284
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANE 216
+IP+ + YN F + Q+ A +
Sbjct: 285 VAAIPAVVIYNIFARQIGNYRAQVGDVAAQ 314
>gi|299770162|ref|YP_003732188.1| putative biopolymer transport protein (ExbB-like) [Acinetobacter
sp. DR1]
gi|298700250|gb|ADI90815.1| putative biopolymer transport protein (ExbB-like) [Acinetobacter
sp. DR1]
Length = 244
Score = 75.9 bits (185), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 99/194 (51%), Gaps = 5/194 (2%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL-ETVCKS-LKNHHNIGLA 85
I LL FSI++W +I+ K V +Q + F + FW ++L + V KS L +A
Sbjct: 13 IWLLVAFSIVTWVLIVVKVVQTQRATKQSKLFVEEFWKAKNLSDAVTKSELGEGPAARVA 72
Query: 86 AIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLV 145
+ E + + ++ QD ++R + + E ++ + + L S+ + +
Sbjct: 73 NTGFQTLIEADEKTHQDLQNSWSRQDLLERHLSKQVLTERRQLEKGSALLASIGNNAPFI 132
Query: 146 GILGAVLGMMGFFQSIA--GYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDS 203
G+ G V G++ Q+IA G S +VV+ P I E+L++ +G+ V++P+ +AYN F+
Sbjct: 133 GLFGTVFGIIHALQAIAHSGNASMDVVAGP-IGEALVATGIGIAVAVPAVLAYNYFVRKV 191
Query: 204 KKFAMQMEGFANEF 217
K ++ FA +F
Sbjct: 192 KTIGADLDDFATDF 205
>gi|88810217|ref|ZP_01125474.1| MotA/TolQ/ExbB proton channel family protein [Nitrococcus mobilis
Nb-231]
gi|88791847|gb|EAR22957.1| MotA/TolQ/ExbB proton channel family protein [Nitrococcus mobilis
Nb-231]
Length = 255
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 103/214 (48%), Gaps = 10/214 (4%)
Query: 17 FMQM--GLAVKCIITLLFIFSILSWSVIIQKSV-NFITLRRQFREFEQLFWSGQSLETVC 73
F+Q GLA K I+ L+ S++SW +I+ K+V N + +RR R+F + FW+ SL V
Sbjct: 14 FLQQADGLA-KTILALMLFASLISWYLILTKTVHNSLAIRRS-RQFLEFFWATPSLTAVA 71
Query: 74 KSLKNHHNIG----LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
L+ LA + A S ++ + D + R + I E
Sbjct: 72 AHLEEQQPKDPFSRLAHHGVIASSHHERYGVNRVSTAGSAGDFVTRALRKVIDEETARAE 131
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCV 188
L+ L S+ S VG+LG V G+ +IA S + + G + E+LI +GL V
Sbjct: 132 SGLTLLASIGSTAPFVGLLGTVWGIYHALIAIAQSGSGGLDQVAGPVGEALIMTAIGLAV 191
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
+IP+ + YN + ++ +++GFA + A L+
Sbjct: 192 AIPAVLGYNFLVRSNRLMLARLDGFAYDLFAFLA 225
>gi|302189331|ref|ZP_07266004.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. syringae
642]
Length = 230
Score = 75.5 bits (184), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 97/198 (48%), Gaps = 4/198 (2%)
Query: 22 LAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHN 81
L + +TLL IFS+++W++++ K+ L RQ R + FW+ + L+ + +
Sbjct: 8 LITQSSMTLLVIFSLVTWALLLGKTFQHWRLTRQNRRYATQFWAARDLKNALHLPNSEGS 67
Query: 82 IG-LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSS 140
+ L A++ S D G QD ++R + I +E + + L S+ S
Sbjct: 68 LARLTDAGAQALAAPHDSPDLG--HSWNRQDLLERSLRQQIHKERRRLESGMILLASIGS 125
Query: 141 AGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCVSIPSSIAYNKF 199
+G+ G V G++ +I+ S ++ + G I E+L++ +G+ V++P+ +AYN F
Sbjct: 126 TAPFIGLFGTVFGIIHALTAISQAKSASIAVVAGPIGEALVATGVGIAVAVPAVLAYNFF 185
Query: 200 IEDSKKFAMQMEGFANEF 217
K +E FA +F
Sbjct: 186 GRRLKLVIADLEEFAVDF 203
>gi|323173751|gb|EFZ59380.1| tonB-system energizer ExbB [Escherichia coli LT-68]
gi|323188563|gb|EFZ73848.1| tonB-system energizer ExbB [Escherichia coli RN587/1]
Length = 230
Score = 75.5 bits (184), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 99/207 (47%), Gaps = 25/207 (12%)
Query: 16 LFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV--- 72
++ + VKC++ L + S+++W++ KSV F +R+ + +QL +SL
Sbjct: 1 MYQHADIVVKCVMIGLILASVVTWAIFFSKSVEFFNQKRRLKREQQLLAEARSLNQANDI 60
Query: 73 -----CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
KSL H + A +E + S +G+ GI++R ++ +A +
Sbjct: 61 AADFGSKSLSLH-------LLNEAQNELELS--EGSDDNEGIKERTSFRLERRVAAVGRQ 111
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
+ +L ++ + VG+ G V G+M F IA + N+ V PGI E+L++ +GL
Sbjct: 112 MGRGNGYLATIGAISPFVGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGIAEALLATAIGL 171
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGF 213
+IP+ + YN FA Q+ GF
Sbjct: 172 VAAIPAVVIYN-------VFARQIGGF 191
>gi|299138489|ref|ZP_07031668.1| MotA/TolQ/ExbB proton channel [Acidobacterium sp. MP5ACTX8]
gi|298599735|gb|EFI55894.1| MotA/TolQ/ExbB proton channel [Acidobacterium sp. MP5ACTX8]
Length = 259
Score = 75.5 bits (184), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 96/208 (46%), Gaps = 5/208 (2%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLET 71
+I + G ++ +L + SI SW++++ K +F +Q R F + F L
Sbjct: 29 AIAEMLHNSGPTALTVLGILLLASIFSWAIMLSKWRSFGAANKQNRRFVRAFRKSGRLSE 88
Query: 72 VCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEK 131
+ L +F E+++ G R ++R A + + + +
Sbjct: 89 IAAVADQFRPSPLVTVFHEIHDEYQRQS--GGRGTPPNPQAMERAAQTASSEAVTIMERR 146
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGLCVS 189
+++L +++ + VG+ G V+G++ F + AG + V+ PGI E+LI+ GL V+
Sbjct: 147 MTWLATIAQSATFVGLFGTVMGIVDAFHGLGTAGAATLRAVA-PGISEALITTAAGLVVA 205
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFANEF 217
IP+ + YN+ ++FA + + F E
Sbjct: 206 IPALVGYNQLTARLREFAARCDDFGREL 233
>gi|585111|sp|Q05605|EXBB_PSEPU RecName: Full=Biopolymer transport protein exbB
gi|49193|emb|CAA49714.1| inner-membrane protein ExbB [Pseudomonas putida]
Length = 329
Score = 75.5 bits (184), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 101/217 (46%), Gaps = 6/217 (2%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFR-EFEQLFWSGQS 68
D+S + ++ + VK ++ L I SI++W++ I K + +R+ R E QL S
Sbjct: 100 DLSPWGMYKNADIVVKIVMIGLAIASIITWTIWIAKGFELMGAKRRLRGEIAQLKKSASL 159
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
E + N + A+ E + S + R GI++R+ ++ +A +
Sbjct: 160 KE--ASEVSNKEGTLAHTLVHDALEEMRLSANT--REKEGIKERVAFRLERLVAASGRNM 215
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
+ L ++ S VG+ G V G+M F IA + N+ V PGI E+L++ LGL
Sbjct: 216 SSGTGVLATIGSTAPFVGLFGTVWGIMNSFIGIAKTQTTNLAVVAPGIAEALLATALGLV 275
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+IP+ + YN F + Q+ + + ++SR
Sbjct: 276 AAIPAVVIYNVFARSIAGYKAQVSDASAQVLLLVSRD 312
>gi|85715805|ref|ZP_01046784.1| MotA/TolQ/ExbB proton channel [Nitrobacter sp. Nb-311A]
gi|85697458|gb|EAQ35337.1| MotA/TolQ/ExbB proton channel [Nitrobacter sp. Nb-311A]
Length = 319
Score = 75.5 bits (184), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 95/198 (47%), Gaps = 4/198 (2%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S +++FM + VK ++ L S+++W++ I K V RR+ +SL
Sbjct: 89 DLSPWSMFMSADIIVKLVMIGLAFASLVTWTICIAKMVELSLARRKLGAALTQIGESRSL 148
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+L + LA++ SAM E + S G S GI++R + E I
Sbjct: 149 AEAQMALGAKDGV-LASLLASAMHEARLSA--GISSDAGIKERAASNFAEIVRAESRRIR 205
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCV 188
+ L ++ + VG+ G V G+M F I+ + N+ V PGI E+L++ LGL
Sbjct: 206 LGMGLLATIGATSPFVGLFGTVWGIMNSFIGISKAQTTNLAVVAPGIAEALLATALGLVA 265
Query: 189 SIPSSIAYNKFIEDSKKF 206
+IP+ I YN F +K +
Sbjct: 266 AIPAVIIYNHFARVTKGY 283
>gi|21673465|ref|NP_661530.1| ExbB/TolQ family protein [Chlorobium tepidum TLS]
gi|21646569|gb|AAM71872.1| ExbB/TolQ family protein [Chlorobium tepidum TLS]
Length = 219
Score = 75.5 bits (184), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 98/191 (51%), Gaps = 15/191 (7%)
Query: 34 FSILSWSVI------IQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAI 87
FSI+SW++I ++KS+N + ++F F+ ++ + + + +N+ N LA +
Sbjct: 30 FSIISWAIIAWKFGFVRKSMN------ESQDFLDSFFDLRNADKLFAASENYRNSSLARV 83
Query: 88 FMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGI 147
F + E+ D+ S +++RI + + E + +T + FL ++ + +G+
Sbjct: 84 FRAGYIEYSGMRDRATAS--NVKERIMLAVKREVNAESKRLTHMVPFLATVGNTAPFIGL 141
Query: 148 LGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCVSIPSSIAYNKFIEDSKKF 206
G V G+M FQ+I S ++ ++ PGI E+L++ GL +IP+ + YN +
Sbjct: 142 FGTVWGIMSSFQNIGLMKSASLAAVAPGISEALVATATGLVAAIPAVMGYNYLAHQIGQI 201
Query: 207 AMQMEGFANEF 217
ME FA +F
Sbjct: 202 ERDMEDFALDF 212
>gi|78063451|ref|YP_373359.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. 383]
gi|77971336|gb|ABB12715.1| outer membrane transport energization protein ExbB [Burkholderia
sp. 383]
Length = 238
Score = 75.5 bits (184), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 98/204 (48%), Gaps = 6/204 (2%)
Query: 24 VKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIG 83
V+ + LL +FS+++W++I+ K++ + + R + FW+ S + +G
Sbjct: 10 VQGALWLLVVFSVVTWTLIVVKAIQSLRASVRNRRYVSAFWAANSFHEAAALDGANSPVG 69
Query: 84 -LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI--ARELEEITEKLSFLGSMSS 140
LAA A+ +S D ++R + I AR EE L+ L S+ S
Sbjct: 70 ELAATGFDALRRADESNAHDLEHSWSRHDLLERHLRQQIHNARRREE--AGLAVLASIGS 127
Query: 141 AGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCVSIPSSIAYNKF 199
VG+ G V G++ +I S ++ + G I E+L++ +G+ V++P+ +AYN F
Sbjct: 128 TAPFVGLFGTVFGIIHALTAITHSASASIDVVAGPIGEALVATGIGIAVAVPAVLAYNFF 187
Query: 200 IEDSKKFAMQMEGFANEFSAILSR 223
+ K + ++ FA +F + R
Sbjct: 188 VRRVKAASADLDAFATDFVTLAQR 211
>gi|205356572|ref|ZP_03223335.1| biopolymer transport protein [Campylobacter jejuni subsp. jejuni
CG8421]
gi|205345577|gb|EDZ32217.1| biopolymer transport protein [Campylobacter jejuni subsp. jejuni
CG8421]
Length = 253
Score = 75.5 bits (184), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 104/210 (49%), Gaps = 14/210 (6%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
+++S+ +L+ VK +I +L +FSIL+W+V I K + F +++ S
Sbjct: 40 IELSLSSLYQNADEVVKGVIYILVLFSILAWAVFISKLMQFYFMKKNL---------DSS 90
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMS-EWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
++ + K LKN + + F +S E + +K I++RI+ + I++++
Sbjct: 91 IQKI-KELKNLNELDQTKDFAGVLSLEIQDELEKSEYKNDHIKERIELRLQNTISKQITA 149
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA--GYYSNNVVSIPGIIESLISILLG 185
LS L S+ ++ +G+ G V G+M F IA G S VV+ PGI ++L + G
Sbjct: 150 SKNGLSLLASIGASAPFIGLFGTVWGIMNAFIGIANLGNASLAVVA-PGIAKALFATAFG 208
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFAN 215
L +IP+ + YN + K ++ AN
Sbjct: 209 LIAAIPAVLFYNYLTRKNLKLMHHLDELAN 238
>gi|170022923|ref|YP_001719428.1| tonB-system energizer ExbB [Yersinia pseudotuberculosis YPIII]
gi|169749457|gb|ACA66975.1| tonB-system energizer ExbB [Yersinia pseudotuberculosis YPIII]
Length = 345
Score = 75.5 bits (184), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 106/210 (50%), Gaps = 4/210 (1%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
MD+S++ ++ + VK ++ L + SI++W+++ K RR+ R+ ++ +
Sbjct: 109 MDLSVWGMYQNADVVVKGVMIGLVLASIVTWTILFSKGTELFRARRRLRQEHEVIGAVTD 168
Query: 69 LETVCKSLKNHHNIGLAAIFM-SAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
L+T + ++ ++++ + A++E S + + GI++R ++ +A +
Sbjct: 169 LDTASERAEDFGQGSVSSLLLREALNERLLSIESNDNN--GIKERTAFRLERRVAAIGRQ 226
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
+ + FL ++ + VG+ G V G+M F IA + N+ V PGI E+L++ LGL
Sbjct: 227 MGKGNGFLATIGAISPFVGLFGTVWGIMNSFIGIAHSQTTNLAVVAPGIAEALLATALGL 286
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANE 216
+IP+ + YN F + Q+ A +
Sbjct: 287 VAAIPAVVIYNIFARQIGNYRAQVGDVAAQ 316
>gi|325122240|gb|ADY81763.1| putative biopolymer transport protein (ExbB-like) [Acinetobacter
calcoaceticus PHEA-2]
Length = 244
Score = 75.5 bits (184), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 99/194 (51%), Gaps = 5/194 (2%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL-ETVCKS-LKNHHNIGLA 85
I LL FSI++W +I+ K V +Q + F + FW ++L + V KS L +A
Sbjct: 13 IWLLVAFSIVTWVLIVIKVVQTQRATKQSKLFVEEFWKAKNLSDAVTKSELGEGPAARVA 72
Query: 86 AIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLV 145
+ E + + ++ QD ++R + + E ++ + + L S+ + +
Sbjct: 73 NTGFQTLIEADEKTHQDLQNSWSRQDLLERHLSKQVLTERRQLEKGSALLASIGNNAPFI 132
Query: 146 GILGAVLGMMGFFQSIA--GYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDS 203
G+ G V G++ Q+IA G S +VV+ P I E+L++ +G+ V++P+ +AYN F+
Sbjct: 133 GLFGTVFGIIHALQAIAHSGNASMDVVAGP-IGEALVATGIGIAVAVPAVLAYNYFVRKV 191
Query: 204 KKFAMQMEGFANEF 217
K ++ FA +F
Sbjct: 192 KTIGADLDDFATDF 205
>gi|51597681|ref|YP_071872.1| MotA/TolQ/ExbB proton channel family protein [Yersinia
pseudotuberculosis IP 32953]
gi|145597776|ref|YP_001161852.1| MotA/TolQ/ExbB proton channel family protein [Yersinia pestis
Pestoides F]
gi|186896821|ref|YP_001873933.1| tonB-system energizer ExbB [Yersinia pseudotuberculosis PB1/+]
gi|51590963|emb|CAH22621.1| Possible MotA/TolQ/ExbB proton channel family protein [Yersinia
pseudotuberculosis IP 32953]
gi|145209472|gb|ABP38879.1| MotA/TolQ/ExbB proton channel family protein [Yersinia pestis
Pestoides F]
gi|186699847|gb|ACC90476.1| tonB-system energizer ExbB [Yersinia pseudotuberculosis PB1/+]
Length = 345
Score = 75.5 bits (184), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 106/210 (50%), Gaps = 4/210 (1%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
MD+S++ ++ + VK ++ L + SI++W+++ K RR+ R+ ++ +
Sbjct: 109 MDLSVWGMYQNADVVVKGVMIGLVLASIVTWTILFSKGTELFRARRRLRQEHEVIGAVTD 168
Query: 69 LETVCKSLKNHHNIGLAAIFM-SAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
L+T + ++ ++++ + A++E S + + GI++R ++ +A +
Sbjct: 169 LDTASERAEDFGQGSVSSLLLHEALNERLLSIESNDNN--GIKERTAFRLERRVAAIGRQ 226
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
+ + FL ++ + VG+ G V G+M F IA + N+ V PGI E+L++ LGL
Sbjct: 227 MGKGNGFLATIGAISPFVGLFGTVWGIMNSFIGIAHSQTTNLAVVAPGIAEALLATALGL 286
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANE 216
+IP+ + YN F + Q+ A +
Sbjct: 287 VAAIPAVVIYNIFARQIGNYRAQVGDVAAQ 316
>gi|238755462|ref|ZP_04616802.1| TonB complex protein [Yersinia ruckeri ATCC 29473]
gi|238706303|gb|EEP98680.1| TonB complex protein [Yersinia ruckeri ATCC 29473]
Length = 339
Score = 75.5 bits (184), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 97/196 (49%), Gaps = 3/196 (1%)
Query: 5 GLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFW 64
GLA MD+S++ ++ + VK ++ L + S+++WS++ K + RR+ + +
Sbjct: 100 GLA-MDLSVWGMYQHADVVVKAVMIGLVLASVVTWSILFSKGMELYRARRRLHQEHMVLG 158
Query: 65 SGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARE 124
S +L + ++ + + +E ++ G+ G ++R ++ +A
Sbjct: 159 SATNLNDALAQADDFAPESISGMLLRE-AENERQLSAGSSDNSGTKERASFRLERRVAAV 217
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISIL 183
++ + FL ++ + VG+ G V G+M F IA + N+ V PGI E+L++
Sbjct: 218 SRQMGKGTGFLATIGAISPFVGLFGTVWGIMNSFIGIAHSQTTNLAVVAPGIAEALLATA 277
Query: 184 LGLCVSIPSSIAYNKF 199
LGL +IP+ + YN F
Sbjct: 278 LGLVAAIPAVVIYNIF 293
>gi|157372444|ref|YP_001480433.1| TonB-system energizer ExbB type-1 [Serratia proteamaculans 568]
gi|157324208|gb|ABV43305.1| TonB-system energizer ExbB type-1 [Serratia proteamaculans 568]
Length = 323
Score = 75.5 bits (184), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 100/193 (51%), Gaps = 4/193 (2%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
MD+S++ ++ + VK ++ L + SI++W+++ K +R+ R + + +S
Sbjct: 87 MDLSVWGMYQHADIVVKIVMIGLVLASIVTWTILFSKGSELFRAKRRLRREQLALANVRS 146
Query: 69 LETVCKSLKNHHNIGLAAIFMS-AMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
L+ + +N + ++++ ++ A +E + S + + GI++R ++ +A
Sbjct: 147 LDEASELAQNFSDESISSVLLNDAQNELELSAESNDNN--GIKERTGFRLERRVAGYSRN 204
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
+ FL ++ + VG+ G V G+M F IA + N+ V PGI E+L++ LGL
Sbjct: 205 MGRGNGFLATIGAISPFVGLFGTVWGIMNSFIGIAHSQTTNLAVVAPGIAEALLATALGL 264
Query: 187 CVSIPSSIAYNKF 199
+IP+ + YN F
Sbjct: 265 VAAIPAVVIYNIF 277
>gi|225872184|ref|YP_002753639.1| transporter, MotA/TolQ/ExbB proton channel family [Acidobacterium
capsulatum ATCC 51196]
gi|225792744|gb|ACO32834.1| transporter, MotA/TolQ/ExbB proton channel family [Acidobacterium
capsulatum ATCC 51196]
Length = 254
Score = 75.1 bits (183), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 91/194 (46%), Gaps = 5/194 (2%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLA 85
++ LL I SI SW +I KS Q R F + F L+ + + L
Sbjct: 36 AVLVLLLIASIWSWVIIFAKSSALRRANMQSRRFLRAFRKATRLQDIAAVSEQFKPSPLV 95
Query: 86 AIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLV 145
+F +K+ G P ++R A + L + E++S+L ++ + V
Sbjct: 96 NVFDDVYETYKRQT--GGFGPPRNITTLERAAMSASSESLTILEERMSWLATIGAVAPFV 153
Query: 146 GILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDS 203
G+ G ++G++ F + AG + V+ PG+ E+LI+ GL V++P+ +AYN+F
Sbjct: 154 GLFGTIMGIVDAFHGLGTAGAATLRAVA-PGVSEALITTAAGLIVAVPAVVAYNQFTAKI 212
Query: 204 KKFAMQMEGFANEF 217
++F +++ F E
Sbjct: 213 REFGSRIDDFTREL 226
>gi|50084695|ref|YP_046205.1| putative biopolymer transport protein (ExbB-like) [Acinetobacter
sp. ADP1]
gi|49530671|emb|CAG68383.1| putative biopolymer transport protein (ExbB-like) [Acinetobacter
sp. ADP1]
Length = 244
Score = 75.1 bits (183), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 99/194 (51%), Gaps = 5/194 (2%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL-ETVCKS-LKNHHNIGLA 85
I LL FSI++W +I+ K V +Q + F + FW ++L + V KS L +A
Sbjct: 13 IWLLVAFSIVTWVLIVVKVVQTQRATKQSKIFVEEFWKAKNLSDAVTKSELGEGPAARVA 72
Query: 86 AIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLV 145
+ E + + ++ QD ++R + + E ++ + + L S+ + +
Sbjct: 73 NAGFQTLIEADEKTHQDLQNSWSRQDLLERHLSKQVLTERRQLEKGSALLASIGNNAPFI 132
Query: 146 GILGAVLGMMGFFQSIA--GYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDS 203
G+ G V G++ Q+IA G S +VV+ P I E+L++ +G+ V++P+ +AYN F+
Sbjct: 133 GLFGTVFGIIHALQAIASSGNASMDVVAGP-IGEALVATGIGIAVAVPAVLAYNYFVRKV 191
Query: 204 KKFAMQMEGFANEF 217
K ++ FA +F
Sbjct: 192 KTIGADLDDFATDF 205
>gi|170736366|ref|YP_001777626.1| MotA/TolQ/ExbB proton channel [Burkholderia cenocepacia MC0-3]
gi|169818554|gb|ACA93136.1| MotA/TolQ/ExbB proton channel [Burkholderia cenocepacia MC0-3]
Length = 238
Score = 75.1 bits (183), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 96/198 (48%), Gaps = 6/198 (3%)
Query: 24 VKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIG 83
V+ + LL +FS+++W++I+ K++ + + R + FW+ S + +G
Sbjct: 10 VQGALWLLVVFSVVTWTLIVVKAIQSLRSSARNRRYVSAFWAANSFHDAATLDGANSPVG 69
Query: 84 -LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI--ARELEEITEKLSFLGSMSS 140
LAA A+ +S D ++R + I AR EE L+ L S+ S
Sbjct: 70 ELAATGFDALRRADESSAHDLEHSWSRHDLLERHLRQQIHNARRREE--AGLAVLASIGS 127
Query: 141 AGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCVSIPSSIAYNKF 199
VG+ G V G++ +I S ++ + G I E+L++ +G+ V++P+ +AYN F
Sbjct: 128 TAPFVGLFGTVFGIIHALTAITHSASASIDVVAGPIGEALVATGIGIAVAVPAVLAYNFF 187
Query: 200 IEDSKKFAMQMEGFANEF 217
+ K + ++ FA +F
Sbjct: 188 VRRVKAASADLDAFATDF 205
>gi|320109153|ref|YP_004184743.1| MotA/TolQ/ExbB proton channel [Terriglobus saanensis SP1PR4]
gi|319927674|gb|ADV84749.1| MotA/TolQ/ExbB proton channel [Terriglobus saanensis SP1PR4]
Length = 251
Score = 75.1 bits (183), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 109/223 (48%), Gaps = 13/223 (5%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG----- 66
S+ + MG ++ +LFI SI S +V+I +++ F R+Q REF
Sbjct: 33 SVLGMLKNMGWIDLVVVAILFIMSIWSLAVMIDRALYFSAARKQSREFAPKVAGALKDGR 92
Query: 67 --QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARE 124
++++ ++ K+H LA + S + E++ GA + I+ R ++ + A
Sbjct: 93 LDEAIKVADRTKKSH----LAEVVTSGLQEFRSYGSGGAITEEQIESS-KRALERSEAIV 147
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISIL 183
++ L L ++ S +G+ G V+G++ FQ IA S + ++ GI E+L++
Sbjct: 148 HAKLKRGLGSLATIGSTAPFIGLFGTVIGILHAFQQIAQSKSTGIGAVAGGISEALVTTA 207
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
GL V+IP+ + +N F + F ++M+ ++E +Q+
Sbjct: 208 FGLLVAIPAVMCFNYFTNKVEAFDVEMDNSSSELVDYFIKQSH 250
>gi|301167927|emb|CBW27512.1| TolQ protein [Bacteriovorax marinus SJ]
Length = 230
Score = 75.1 bits (183), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 114/225 (50%), Gaps = 14/225 (6%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
++ I + + GL VK ++ L + S++SW++I++K L R+F +++ + SL
Sbjct: 5 ELDIVQIMLDSGLVVKTVLLSLILASVVSWAIILKKKKLIKELEENSRDFLEVYKNSTSL 64
Query: 70 ETVCKSLKNHHNIGLA---AIFMSAMSEWKKSCDKGARSPIGIQDRIDR----MMDVAIA 122
+ + +S H + L+ ++F + E K D ++ I + ++ +
Sbjct: 65 KDIMESC---HRLSLSPHKSLFTNGYLELSKLKDALGDDKEKLEQHITKHGLQFLERGMK 121
Query: 123 RELEEITEKLS-FLGSMSSAGLL---VGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIES 178
+ + EI +L FL +++S G + VG+ G V G++G F +AG + PGI E+
Sbjct: 122 KGVHEINIELERFLATLASIGSVTPFVGLFGTVWGIIGSFTGLAGGGATLDAVAPGIAEA 181
Query: 179 LISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
L++ +GL +IP+ YNKF ++ +ME F EF ++ R
Sbjct: 182 LVATAVGLVAAIPAVWFYNKFNNENSHIQSEMESFGQEFLNVVER 226
>gi|325982383|ref|YP_004294785.1| MotA/TolQ/ExbB proton channel [Nitrosomonas sp. AL212]
gi|325531902|gb|ADZ26623.1| MotA/TolQ/ExbB proton channel [Nitrosomonas sp. AL212]
Length = 253
Score = 75.1 bits (183), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 104/210 (49%), Gaps = 23/210 (10%)
Query: 36 ILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEW 95
I SW +II KS+ + +R+ F + FWS SL+T LKN A+ +A SE
Sbjct: 30 IASWYLIITKSIANLIAKRRVEAFLKHFWSYDSLQTARIELKN-------AVPDNAFSEL 82
Query: 96 KK-SCDKGARSPI----------GIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLL 144
K S D + S I G + + R + I +E + L+ + + SA
Sbjct: 83 AKMSIDATSDSKIRNIHKSLTAEGTNEFLTRTLRNGIDQEATRVENGLTLIATAGSAAPY 142
Query: 145 VGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIED 202
+G+ G V G+ I +G + + V+ P + E+LI LGL V+IP+ +AYN F+
Sbjct: 143 IGLFGTVWGIYHALIQIGLSGQGTLDKVAGP-VGEALIMTALGLAVAIPAVLAYNAFVRR 201
Query: 203 SKKFAMQMEGFANEFSAILS--RQTEGNIS 230
++ + ++E FA++ +++ T+ +IS
Sbjct: 202 NRIWLARLEAFAHDLFVLITAGDNTDASIS 231
>gi|254499314|ref|ZP_05111986.1| truncated biopolymer transport protein TolQ [Legionella drancourtii
LLAP12]
gi|254351469|gb|EET10332.1| truncated biopolymer transport protein TolQ [Legionella drancourtii
LLAP12]
Length = 159
Score = 75.1 bits (183), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 82/149 (55%), Gaps = 7/149 (4%)
Query: 83 GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAG 142
G+AAIF + E+ ++ +G + + I R+M ++ A+E E++ + L F S+ S
Sbjct: 14 GMAAIFHAGFKEFVRARKQGNV----VIEPIQRVMQISHAKEAEKLEQHLPFFASVGSIA 69
Query: 143 LLVGILGAVLGMMGFFQSIAGYYSNNVVSI--PGIIESLISILLGLCVSIPSSIAYNKFI 200
VG+ G V G+M FQ++ G+ +++ PGI E+L++ LGL +IP+ IAYN++
Sbjct: 70 PYVGLFGTVWGIMTSFQAL-GHAQQATIAMVAPGISEALVATALGLFTAIPAVIAYNRYT 128
Query: 201 EDSKKFAMQMEGFANEFSAILSRQTEGNI 229
+ + + F E +++ +Q +
Sbjct: 129 TRANILLNRFDLFQEELISLIEQQNSDTV 157
>gi|206562421|ref|YP_002233184.1| transport protein [Burkholderia cenocepacia J2315]
gi|198038461|emb|CAR54419.1| transport protein [Burkholderia cenocepacia J2315]
Length = 238
Score = 75.1 bits (183), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 96/198 (48%), Gaps = 6/198 (3%)
Query: 24 VKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIG 83
V+ + LL +FS+++W++I+ K++ + + R + FW+ S + +G
Sbjct: 10 VQGALWLLVVFSVVTWTLIVVKAIQSLRSSARNRRYVSAFWAANSFHDAAALDGANSPVG 69
Query: 84 -LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI--ARELEEITEKLSFLGSMSS 140
LAA A+ +S D ++R + I AR EE L+ L S+ S
Sbjct: 70 QLAATGFDALRRADESSAHDLEHSWSRHDLLERHLRQQIHNARRREE--AGLAVLASIGS 127
Query: 141 AGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCVSIPSSIAYNKF 199
VG+ G V G++ +I S ++ + G I E+L++ +G+ V++P+ +AYN F
Sbjct: 128 TAPFVGLFGTVFGIIHALTAITHSASASIDVVAGPIGEALVATGIGIAVAVPAVLAYNFF 187
Query: 200 IEDSKKFAMQMEGFANEF 217
+ K + ++ FA +F
Sbjct: 188 VRRVKAASADLDAFATDF 205
>gi|116691633|ref|YP_837166.1| MotA/TolQ/ExbB proton channel [Burkholderia cenocepacia HI2424]
gi|116649633|gb|ABK10273.1| outer membrane transport energization protein ExbB [Burkholderia
cenocepacia HI2424]
Length = 238
Score = 75.1 bits (183), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 96/198 (48%), Gaps = 6/198 (3%)
Query: 24 VKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIG 83
V+ + LL +FS+++W++I+ K++ + + R + FW+ S + +G
Sbjct: 10 VQGALWLLVVFSVVTWTLIVVKAIQSLRSSARNRRYVSAFWAANSFHDAATLDGANSPVG 69
Query: 84 -LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI--ARELEEITEKLSFLGSMSS 140
LAA A+ +S D ++R + I AR EE L+ L S+ S
Sbjct: 70 ELAATGFDALRRADESSAHDLEHSWSRHDLLERHLRQQIHNARRREE--AGLAVLASIGS 127
Query: 141 AGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCVSIPSSIAYNKF 199
VG+ G V G++ +I S ++ + G I E+L++ +G+ V++P+ +AYN F
Sbjct: 128 TAPFVGLFGTVFGIIHALTAITHSASASIDVVAGPIGEALVATGIGIAVAVPAVLAYNFF 187
Query: 200 IEDSKKFAMQMEGFANEF 217
+ K + ++ FA +F
Sbjct: 188 VRRVKAASADLDAFATDF 205
>gi|296161441|ref|ZP_06844247.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. Ch1-1]
gi|295888256|gb|EFG68068.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. Ch1-1]
Length = 262
Score = 75.1 bits (183), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 100/231 (43%), Gaps = 23/231 (9%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
M +YGLA ++ + +CI++ L I S+LSW+VI+ K + ++R R+ E
Sbjct: 1 MQHYGLA-------NVWESGDIVTRCILSTLLIMSVLSWTVILVKLWTILRIKRVTRQAE 53
Query: 61 QLFWSGQSLETVCKSLKNH-------HNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRI 113
FW E KSL H + + A+ + + I + D I
Sbjct: 54 AQFWRADHFEDGLKSLGAHASKSVRDNPLLALALAGEEAAAHHQQTQSHLHDRIDVSDWI 113
Query: 114 DR----MMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
R MD AIAR + L+ L S+ S VG+ G V G+ I ++
Sbjct: 114 TRRLQDTMDDAIAR----MQSGLAVLASIGSTAPFVGLFGTVWGIYHALILIGETGQTSI 169
Query: 170 VSIPGII-ESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
+ G + ESLI GL V+IP+ + YN +K +++ FA+ A
Sbjct: 170 DHVAGPVGESLIMTAFGLFVAIPAVLGYNGLTRANKSVVTRLKRFAHGLHA 220
>gi|224370142|ref|YP_002604306.1| TolQ1 [Desulfobacterium autotrophicum HRM2]
gi|223692859|gb|ACN16142.1| TolQ1 [Desulfobacterium autotrophicum HRM2]
Length = 236
Score = 75.1 bits (183), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 108/226 (47%), Gaps = 18/226 (7%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFRE---FEQLFWSGQSL 69
IF + GL VK ++ LL FSI SW++I + + +++ + E F LFW ++L
Sbjct: 8 IFHMLSNAGLVVKLVLLLLLFFSITSWAIIF---IKYRYVKKAYGESVDFTDLFWQCRNL 64
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRID----------RMMDV 119
K +A +F++ E K++ + +G + D R +
Sbjct: 65 SDAFSKAKVLKQSPVARVFVAGYLEIKRASEPSGEG-VGEKRATDTNFMGLGNVKRALRR 123
Query: 120 AIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIES 178
+I E+ +++ + FL + + +G+ G V G+M F I S ++ V PGI E+
Sbjct: 124 SINLEVRRLSQLVPFLATAGNTAPFIGLFGTVWGIMNTFHGIGTTGSASLAVVAPGISEA 183
Query: 179 LISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
L++ GL V+IP+ IAYN F + + +++ FA + I+ R
Sbjct: 184 LVATAAGLAVAIPAVIAYNYFTDRIRVLDSELQSFAADLLNIIERD 229
>gi|312963866|ref|ZP_07778337.1| TonB system transport protein [Pseudomonas fluorescens WH6]
gi|311281901|gb|EFQ60511.1| TonB system transport protein [Pseudomonas fluorescens WH6]
Length = 325
Score = 74.7 bits (182), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 110/236 (46%), Gaps = 17/236 (7%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFR---- 57
N G+A D+S + ++ + VK ++ L I SI++W++ I K + +R+ R
Sbjct: 88 NTLGMA-HDLSPWGMYQNADVVVKAVMIGLAIASIITWTIWIAKGFELLGAKRRLRTEIV 146
Query: 58 EFEQLFWSGQSLETVCK--SLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDR 115
++ ++ ET K +L N + A+ E + S + R GI++R+
Sbjct: 147 HLKKATTLKEASETATKKGTLAN-------LLVHDALEEMRLSAN--TREKEGIKERVSF 197
Query: 116 MMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPG 174
++ +A ++ L ++ S VG+ G V G+M F IA + N+ V PG
Sbjct: 198 RLERLVAACGRNMSSGTGVLATIGSTAPFVGLFGTVWGIMNSFIGIAKTQTTNLAVVAPG 257
Query: 175 IIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
I E+L++ LGL +IP+ + YN F + Q+ + E ++SR + S
Sbjct: 258 IAEALLATALGLVAAIPAVVIYNVFARSIAGYKAQVSDASAEVLLLVSRDLDHQPS 313
>gi|57168649|ref|ZP_00367781.1| biopolymer transport protein Cj0179 [Campylobacter coli RM2228]
gi|57019930|gb|EAL56610.1| biopolymer transport protein Cj0179 [Campylobacter coli RM2228]
Length = 253
Score = 74.7 bits (182), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 105/210 (50%), Gaps = 14/210 (6%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
+++S+ +L+ VK +I +L +FS+L+W+V I K + F +++ +F S
Sbjct: 40 IELSLSSLYQNADEVVKGVIYILVLFSVLAWAVFISKLMQFYFMKKNL-DF--------S 90
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMS-EWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + K LKN + + F +S E + +K I++RI+ + I++++
Sbjct: 91 IHKI-KELKNLNELDQTKGFAGVLSLEIQDELEKSEYKNDHIKERIELRLQNTISKQITA 149
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA--GYYSNNVVSIPGIIESLISILLG 185
LS L S+ ++ +G+ G V G+M F IA G S VV+ PGI E+L + G
Sbjct: 150 SKNGLSLLASIGASAPFIGLFGTVWGIMNAFIGIANLGNASLAVVA-PGIAEALFATAFG 208
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFAN 215
L +IP+ + YN + K ++ AN
Sbjct: 209 LIAAIPAVLFYNYLTRKNLKLMHHLDELAN 238
>gi|62181671|ref|YP_218088.1| biopolymer transport protein ExbB [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SC-B67]
gi|62129304|gb|AAX67007.1| uptake of enterochelin; tonB-dependent uptake of B colicins
[Salmonella enterica subsp. enterica serovar
Choleraesuis str. SC-B67]
gi|322716155|gb|EFZ07726.1| biopolymer transport protein ExbB [Salmonella enterica subsp.
enterica serovar Choleraesuis str. A50]
Length = 243
Score = 74.7 bits (182), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 110/226 (48%), Gaps = 10/226 (4%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S++ ++ + VKC++ L + S+++W++ KSV F T + + + + +SL
Sbjct: 4 DLSVWGMYQHADIVVKCVMIGLILASVVTWAIFFSKSVEFFTQKLRLKREQLQLADARSL 63
Query: 70 ETVCKSLKNHHNIGLAAIFMS-AMSEWKKSCDKGARSPIGIQDRIDRMMD---VAIAREL 125
+ L+A ++ A +E + S +G+ GI++R ++ AI R +
Sbjct: 64 DQASDIAAGFSAKSLSAQLINEAQNELELS--QGSEDNEGIKERTGFRLERRVAAIGRYM 121
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILL 184
L+ +G++S VG+ G V G+M F IA + N+ V PGI E+L++ +
Sbjct: 122 GRGNGYLATIGAISP---FVGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGIAEALLATAI 178
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
GL +IP+ + YN F + + A + + SR + N S
Sbjct: 179 GLVAAIPAVVIYNIFARQIGSYKATLGDVAAQVLLLQSRDLDLNAS 224
>gi|190575740|ref|YP_001973585.1| putative MotA/TolQ/ExbB proton channel family protein
[Stenotrophomonas maltophilia K279a]
gi|190013662|emb|CAQ47297.1| putative MotA/TolQ/ExbB proton channel family protein
[Stenotrophomonas maltophilia K279a]
Length = 247
Score = 74.7 bits (182), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 92/191 (48%), Gaps = 6/191 (3%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
++ + +++ + VK ++ L + S+ +W+V++ K RQ R L L
Sbjct: 19 LTPWGMYLAADVVVKAVMIALALASLATWTVLLAKGWELARQARQLRAARALLLQSAQLP 78
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
+ I LA + +A +E + S D +R GI++RI +D I E +
Sbjct: 79 PQSEEASLQQGIALA-MLDAARTELRLSQDLDSRD--GIKERIASRLD-RIELETARVQR 134
Query: 131 K-LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCV 188
+ + L S+ + VG+ G V G+M F IA + N+ V PGI E+L++ LGL
Sbjct: 135 RGIGVLASIGAVAPFVGLFGTVWGIMNSFIGIAHSNTTNLAVVAPGIAEALLATALGLVA 194
Query: 189 SIPSSIAYNKF 199
+IP+ + YN F
Sbjct: 195 AIPAVLVYNHF 205
>gi|311278071|ref|YP_003940302.1| tonB-system energizer ExbB [Enterobacter cloacae SCF1]
gi|308747266|gb|ADO47018.1| tonB-system energizer ExbB [Enterobacter cloacae SCF1]
Length = 243
Score = 74.7 bits (182), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 97/194 (50%), Gaps = 8/194 (4%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S++ ++ + VK ++ L + S+++W++ KS I+ +R+ + +QL +SL
Sbjct: 9 DLSVWGMYHHADIVVKVVMIGLVLASVVTWAIFFSKSAELISHKRRLKREQQLLGDARSL 68
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMD---VAIARELE 126
L+ +S ++ ++ GA GI++R ++ A+ R +
Sbjct: 69 NQASDIAGAFEAKSLSRQLISE-AQNERELSAGAEDYEGIKERTGFRLERRVAAVGRHMG 127
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLG 185
L+ +G++S VG+ G V G+M F IA + N+ V PGI E+L++ +G
Sbjct: 128 RGNGYLATIGAISP---FVGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGIAEALLATAIG 184
Query: 186 LCVSIPSSIAYNKF 199
L +IP+ + YN F
Sbjct: 185 LFAAIPAVVIYNVF 198
>gi|310766368|gb|ADP11318.1| biopolymer transport protein ExbB [Erwinia sp. Ejp617]
Length = 244
Score = 74.7 bits (182), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 95/192 (49%), Gaps = 2/192 (1%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
MD+S++ ++ + VK ++ L + S+ +W++ KS+ + R++ + + L +S
Sbjct: 8 MDLSVWGMYQHADIVVKAVMIGLLLASVATWAIFFSKSIELRSARKRLKREQLLLADARS 67
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
L+ + + + L +I + +E + G+ GI++R ++ +A
Sbjct: 68 LDEASQIGGDFQSQSL-SILLIKEAENELELSAGSDDNNGIKERTAFRLERRVAAIGRHA 126
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
FL ++ S VG+ G V G+M F IA + N+ V PGI E+L++ +GL
Sbjct: 127 GRGNGFLATIGSIAPFVGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGIAEALLATAIGLV 186
Query: 188 VSIPSSIAYNKF 199
+IP+ + YN F
Sbjct: 187 AAIPAVVIYNVF 198
>gi|224584956|ref|YP_002638755.1| biopolymer transport protein ExbB [Salmonella enterica subsp.
enterica serovar Paratyphi C strain RKS4594]
gi|224469484|gb|ACN47314.1| biopolymer transport ExbB protein [Salmonella enterica subsp.
enterica serovar Paratyphi C strain RKS4594]
Length = 248
Score = 74.7 bits (182), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 107/223 (47%), Gaps = 4/223 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S++ ++ + VKC++ L + S+++W++ KSV F T + + + + +SL
Sbjct: 9 DLSVWGMYQHADIVVKCVMIGLILASVVTWAIFFSKSVEFFTQKLRLKREQLQLADARSL 68
Query: 70 ETVCKSLKNHHNIGLAAIFMS-AMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ L+A ++ A +E + S +G+ GI++R ++ +A +
Sbjct: 69 DQASDIAAGFSAKSLSAQLINEAQNELELS--QGSEDNEGIKERTGFRLERRVAAVGRYM 126
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
+L ++ + VG+ G V G+M F IA + N+ V PGI E+L++ +GL
Sbjct: 127 GRGNGYLATIGAISPFVGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGIAEALLATAIGLV 186
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
+IP+ + YN F + + A + + SR + N S
Sbjct: 187 AAIPAVVIYNIFARQIGSYKATLGDVAAQVLLLQSRDLDLNAS 229
>gi|77461776|ref|YP_351283.1| MotA/TolQ/ExbB proton channel [Pseudomonas fluorescens Pf0-1]
gi|77385779|gb|ABA77292.1| outer membrane transport energization protein ExbB [Pseudomonas
fluorescens Pf0-1]
Length = 317
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 110/235 (46%), Gaps = 11/235 (4%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFR-EFE 60
N G+A D+S + ++ + VK ++ L I SI++W++ I K + +R+ R E
Sbjct: 80 NTLGMA-HDLSPWGMYQNADVIVKAVMIGLAIASIITWTIWIAKGFELMGAKRRLRGEIA 138
Query: 61 QLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVA 120
L + E + K L + A+ E + S + AR GI++R+ ++
Sbjct: 139 ALKKAATLKEASATAAKEGTLANL--LVHDALEEMRLSTN--AREKEGIKERVSFRLERL 194
Query: 121 IARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESL 179
+A ++ L ++ S VG+ G V G+M F IA + N+ V PGI E+L
Sbjct: 195 VAACGRNMSSGTGVLATIGSTAPFVGLFGTVWGIMNSFIGIAKTQTTNLAVVAPGIAEAL 254
Query: 180 ISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR----QTEGNIS 230
++ LGL +IP+ + YN F + Q+ + + ++SR Q E N S
Sbjct: 255 LATALGLVAAIPAVVIYNVFARSIAGYKAQVSDASAQVLLLVSRDLDHQPERNSS 309
>gi|238750907|ref|ZP_04612404.1| TonB complex protein [Yersinia rohdei ATCC 43380]
gi|238710821|gb|EEQ03042.1| TonB complex protein [Yersinia rohdei ATCC 43380]
Length = 336
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 103/197 (52%), Gaps = 5/197 (2%)
Query: 5 GLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFW 64
GLA MD+S++ ++ + VK ++ L + SI++W+++ K RR+ ++ ++
Sbjct: 97 GLA-MDLSVWGMYQHADVVVKAVMIGLVLASIVTWTILFSKGTELFRARRRLQQEHEVIG 155
Query: 65 SGQSLETVCKSLKNHHNIGLAAIFMS-AMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAR 123
+ +L+T + ++++ +S A +E S + + GI++R ++ +A
Sbjct: 156 AVTNLDTASERAAAFSTESISSLLLSEAQNERLLSAESDDNN--GIKERAAFRLERRVAA 213
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISI 182
++ + FL ++ + VG+ G V G+M F IA + N+ V PGI E+L++
Sbjct: 214 ISRQMGKGNGFLATIGAISPFVGLFGTVWGIMNSFIGIAHSQTTNLAVVAPGIAEALLAT 273
Query: 183 LLGLCVSIPSSIAYNKF 199
LGL +IP+ + YN F
Sbjct: 274 ALGLVAAIPAVVIYNIF 290
>gi|237797486|ref|ZP_04585947.1| TonB system transport protein ExbB [Pseudomonas syringae pv. oryzae
str. 1_6]
gi|331020336|gb|EGI00393.1| TonB system transport protein ExbB [Pseudomonas syringae pv. oryzae
str. 1_6]
Length = 230
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 100/208 (48%), Gaps = 15/208 (7%)
Query: 20 MGLAVKCIIT-----LLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCK 74
M A IIT LL IFS+++W++++ K+ L RQ R + FW+ + L+
Sbjct: 1 MNTAYSVIITQTSMILLVIFSLVTWALLLGKTFQHWRLSRQNRRYATQFWAARDLQ---N 57
Query: 75 SLKNHHNIG----LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
+L+ H G L A++ S D G QD ++R + I +E +
Sbjct: 58 ALQLPHGEGSLARLTDAGAQALAAPHDSPDLG--HSWNRQDLLERSLRQQIHKERRHLES 115
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCVS 189
+ L S+ S +G+ G V G++ +I+ S ++ + G I E+L++ +G+ V+
Sbjct: 116 GMILLASIGSTAPFIGLFGTVFGIIHALTAISQAKSASIAVVAGPIGEALVATGVGIAVA 175
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFANEF 217
+P+ +AYN F K ++ FA +F
Sbjct: 176 VPAVLAYNFFGRRMKLVIADLDEFAVDF 203
>gi|290474740|ref|YP_003467620.1| TonB complex protein [Xenorhabdus bovienii SS-2004]
gi|289174053|emb|CBJ80840.1| TonB complex protein [Xenorhabdus bovienii SS-2004]
Length = 330
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 93/192 (48%), Gaps = 4/192 (2%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S++ ++ VK ++ L I S+++W++ K + RR+ R+ + +L
Sbjct: 102 DLSVWGMYQNADAVVKTVMLGLVIASVITWALFFSKGTELLIARRRLRKEQWALADAANL 161
Query: 70 ETVCKSLKNHHNIGLAAIFMS-AMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ K + ++ + +S A SE ++ + G ++R M+ A+A +
Sbjct: 162 DVAAKIASDFGKQSISRLLLSEAQSE--RALSAASTDKAGTKERTSFRMERAVAAISRHM 219
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
+L ++ + VG+ G V G+M F IA + N+ V PGI E+L++ LGL
Sbjct: 220 GRGNGYLATIGAISPFVGLFGTVWGIMNSFIGIAHSQTTNLAVVAPGIAEALLATALGLV 279
Query: 188 VSIPSSIAYNKF 199
+IP+ + YN F
Sbjct: 280 AAIPAVVIYNIF 291
>gi|53805154|ref|YP_113182.1| MotA/TolQ/ExbB proton channel family protein [Methylococcus
capsulatus str. Bath]
gi|53758915|gb|AAU93206.1| MotA/TolQ/ExbB proton channel family protein [Methylococcus
capsulatus str. Bath]
Length = 218
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 100/210 (47%), Gaps = 6/210 (2%)
Query: 21 GLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV---CKSLK 77
L + + +L FS+L+W++I+ K + R FE+ FW SL+ S K
Sbjct: 7 ALIINVTLWVLIAFSVLTWTLIVLKVWQYWRQSLANRSFEERFWGASSLDEARGEIASGK 66
Query: 78 NHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGS 137
+ LA + ++S + + ++R + + RE L+ L S
Sbjct: 67 TAPVVRLAGAGFEVLDNARQSHPPALKYRGDLLATLERKLKRQLERESRLSDIGLTVLAS 126
Query: 138 MSSAGLLVGILGAVLGMMGFFQSIA--GYYSNNVVSIPGIIESLISILLGLCVSIPSSIA 195
+ S VG+ G V G+M Q I+ G S VV+ P I E+LI+ +G+ V++P+ +A
Sbjct: 127 IGSTAPFVGLFGTVWGIMHALQDISRSGKASLEVVAGP-IGEALIATAIGIAVAVPAVLA 185
Query: 196 YNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
YN + S++ +E FA +F +++ +T
Sbjct: 186 YNFLMRQSRRKQQALEIFAEDFLHLVAAET 215
>gi|76817585|ref|YP_337083.1| MotA/TolQ/ExbB proton channel family protein [Burkholderia
pseudomallei 1710b]
gi|226199189|ref|ZP_03794750.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei Pakistan 9]
gi|76582058|gb|ABA51532.1| MotA/TolQ/ExbB proton channel family protein [Burkholderia
pseudomallei 1710b]
gi|225928788|gb|EEH24814.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei Pakistan 9]
Length = 234
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 91/215 (42%), Gaps = 15/215 (6%)
Query: 16 LFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKS 75
++ Q + I L + SILSW VI+ K N I L+R ++ EQ FW +
Sbjct: 1 MWAQGDFVTRFIAIALLVMSILSWMVIVIKGWNVIRLKRLSKDAEQSFWHSDDFDEGVDK 60
Query: 76 LKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRID----------RMMDVAIAREL 125
L + F++ K++ D ++ + DR+D MD IAR
Sbjct: 61 LGRASSSSQDNPFLALALSGKEAADHHHQTQPHLHDRMDVSDWVTRCLKDTMDEGIAR-- 118
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILL 184
+ L+ L S+ S VG+ G V G+ I ++ + G + ESLI
Sbjct: 119 --MQGGLAILASIGSTAPFVGLFGTVWGIYHALLVIGATGQTSIDQVAGPVGESLIMTAF 176
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
GL V+IP+ + YN +K ++ FA+ A
Sbjct: 177 GLFVAIPAVLGYNALTRANKSVVSRLRRFAHGLHA 211
>gi|14595284|gb|AAK70856.1|AF315582_1 ExbB [Pseudomonas putida]
Length = 320
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 101/217 (46%), Gaps = 6/217 (2%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFR-EFEQLFWSGQS 68
D+S + ++ + VK ++ L I SI++W++ I K + +R+ R E QL S
Sbjct: 91 DLSPWGMYKNADIVVKIVMIGLAIASIITWTIWIAKGFELMGAKRRLRGEIAQLKKSTTL 150
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
E + N + A+ E + S + AR GI++R+ ++ + +
Sbjct: 151 KE--ASEVSNKEGTLAHTLVHDALEEMRLSAN--AREKEGIKERVSFRLERLVHASGRTM 206
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
+ L ++ S VG+ G V G+M F IA + N+ V PGI E+L++ LGL
Sbjct: 207 SSGTGVLATIGSTAPFVGLFGTVWGIMNSFIGIAKTQTTNLAVVAPGIAEALLATALGLV 266
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+IP+ + YN F + Q+ + + ++SR
Sbjct: 267 AAIPAVVIYNVFARSIAGYKAQVSDASAQVLLLVSRD 303
>gi|26991982|ref|NP_747407.1| ferric siderophore transport system protein ExbB [Pseudomonas
putida KT2440]
gi|24987113|gb|AAN70871.1|AE016731_6 ferric siderophore transport system protein ExbB [Pseudomonas
putida KT2440]
Length = 320
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 101/217 (46%), Gaps = 6/217 (2%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFR-EFEQLFWSGQS 68
D+S + ++ + VK ++ L I SI++W++ I K + +R+ R E QL S
Sbjct: 91 DLSPWGMYKNADIVVKIVMIGLAIASIITWTIWIAKGFELMGAKRRLRGEIAQLKKSTTL 150
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
E + N + A+ E + S + AR GI++R+ ++ + +
Sbjct: 151 KE--ASEVTNKEGTLAHTLVHDALEEMRLSAN--AREKEGIKERVSFRLERLVHASGRTM 206
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
+ L ++ S VG+ G V G+M F IA + N+ V PGI E+L++ LGL
Sbjct: 207 SSGTGVLATIGSTAPFVGLFGTVWGIMNSFIGIAKTQTTNLAVVAPGIAEALLATALGLV 266
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+IP+ + YN F + Q+ + + ++SR
Sbjct: 267 AAIPAVVIYNVFARSIAGYKAQVSDASAQVLLLVSRD 303
>gi|167036340|ref|YP_001671571.1| tonB-system energizer ExbB [Pseudomonas putida GB-1]
gi|166862828|gb|ABZ01236.1| tonB-system energizer ExbB [Pseudomonas putida GB-1]
Length = 326
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 101/217 (46%), Gaps = 6/217 (2%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFR-EFEQLFWSGQS 68
D+S + ++ + VK ++ L I SI++W++ I K + +R+ R E QL S
Sbjct: 97 DLSPWGMYKNADIVVKIVMIGLAIASIITWTIWIAKGFELMGAKRRLRGEIAQLKKSTTL 156
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
E + N + A+ E + S + AR GI++R+ ++ + +
Sbjct: 157 KE--ASEVSNKEGTLAHTLVHDALEEMRLSAN--AREKEGIKERVSFRLERLVHASGRTM 212
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
+ L ++ S VG+ G V G+M F IA + N+ V PGI E+L++ LGL
Sbjct: 213 SSGTGVLATIGSTAPFVGLFGTVWGIMNSFIGIAKTQTTNLAVVAPGIAEALLATALGLV 272
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+IP+ + YN F + Q+ + + ++SR
Sbjct: 273 AAIPAVVIYNVFARSIAGYKAQVSDASAQVLLLVSRD 309
>gi|308271864|emb|CBX28472.1| Protein tolQ [uncultured Desulfobacterium sp.]
Length = 258
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 108/240 (45%), Gaps = 21/240 (8%)
Query: 4 YGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFRE---FE 60
Y + + +F + G+ V+ ++ L +FSI SW++I + + LRR F+E F
Sbjct: 14 YSMGSQQLDLFHMIGNAGIVVQGVLMTLVLFSITSWAIIF---IKYKYLRRAFKESEAFT 70
Query: 61 QLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKK--------------SCDKGARSP 106
FW + V K LA IF +E K S D S
Sbjct: 71 DYFWRCRDFSDVYAKSKELTGSPLARIFRIGYAELAKLSQSGVSISSMSSESEDVTISSK 130
Query: 107 IGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYS 166
D + R + AI E+ +T+ + FL + + +G+ G V G+M F I S
Sbjct: 131 FAGMDNVKRALRRAINSEITGLTQLVPFLATTGNTSPFIGLFGTVWGIMNSFHGIGLRGS 190
Query: 167 NNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+ V PGI E+L++ GL +IP+ IA+N F++ + +++ FA +F I+ R T
Sbjct: 191 ATLAVVAPGISEALVATAAGLAAAIPAVIAFNYFMQKIRNIESELQSFAADFLNIVERDT 250
>gi|259909764|ref|YP_002650120.1| biopolymer transport protein ExbB [Erwinia pyrifoliae Ep1/96]
gi|224965386|emb|CAX56918.1| Biopolymer transport protein [Erwinia pyrifoliae Ep1/96]
Length = 244
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 95/192 (49%), Gaps = 2/192 (1%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
MD+S++ ++ + VK ++ L + S+ +W++ KS+ + R++ + + L +S
Sbjct: 8 MDLSVWGMYQHADIVVKAVMIGLLLASVATWAIFFSKSIELRSARKRLKREQLLLADARS 67
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
L+ + + + L +I + +E + G+ GI++R ++ +A
Sbjct: 68 LDEASQIGGDFQSQSL-SILLIKEAENELELSAGSDDNNGIKERTAFRLERRVAAIGRHP 126
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
FL ++ S VG+ G V G+M F IA + N+ V PGI E+L++ +GL
Sbjct: 127 GRGNGFLATIGSIAPFVGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGIAEALLATAIGLV 186
Query: 188 VSIPSSIAYNKF 199
+IP+ + YN F
Sbjct: 187 AAIPAVVIYNVF 198
>gi|313501280|gb|ADR62646.1| TonB-system energizer ExbB type-1 [Pseudomonas putida BIRD-1]
Length = 324
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 101/217 (46%), Gaps = 6/217 (2%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFR-EFEQLFWSGQS 68
D+S + ++ + VK ++ L I SI++W++ I K + +R+ R E QL S
Sbjct: 95 DLSPWGMYKNADIVVKIVMIGLAIASIITWTIWIAKGFELMGAKRRLRGEIAQLKKSTTL 154
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
E + N + A+ E + S + AR GI++R+ ++ + +
Sbjct: 155 KE--ASEVSNKEGTLAHTLVHDALEEMRLSAN--AREKEGIKERVSFRLERLVHASGRTM 210
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
+ L ++ S VG+ G V G+M F IA + N+ V PGI E+L++ LGL
Sbjct: 211 SSGTGVLATIGSTAPFVGLFGTVWGIMNSFIGIAKTQTTNLAVVAPGIAEALLATALGLV 270
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+IP+ + YN F + Q+ + + ++SR
Sbjct: 271 AAIPAVVIYNVFARSIAGYKAQVSDASAQVLLLVSRD 307
>gi|307317028|ref|ZP_07596469.1| tonB-system energizer ExbB [Sinorhizobium meliloti AK83]
gi|306897116|gb|EFN27861.1| tonB-system energizer ExbB [Sinorhizobium meliloti AK83]
Length = 328
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 103/219 (47%), Gaps = 3/219 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S +F+ + VK ++ L + S+ +W++ + K++ I + + + S L
Sbjct: 85 DLSPVGMFLAADIVVKAVMVALALASVATWAIFLVKTLELIYAKSRLKRAVAALVSANGL 144
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSP-IGIQDRIDRMMDVAIARELEEI 128
V L+ + + +A+ E +S +P +G+++R+ ++ R + +
Sbjct: 145 AEVQPKLERRAGVA-GEMVAAAIDEMTRSEAVLDLAPAVGVKERVSSLLTRIEVRAGKRM 203
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLC 187
+ L S+ S G VG+ G V G+M F I+ + N+ + PGI E+L++ +GL
Sbjct: 204 SAGTGILASIGSVGPFVGLFGTVWGIMNSFIGISKAQTTNLAIVAPGIAEALLATAIGLV 263
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ + YN F + + + A ++SR +
Sbjct: 264 AAIPAVVIYNYFARSVGGYKLILADAAAAVERLVSRDLD 302
>gi|320016755|gb|ADW00327.1| membrane spanning protein in TonB-ExbB-ExbD complex [Yersinia
pestis biovar Medievalis str. Harbin 35]
Length = 345
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 105/210 (50%), Gaps = 4/210 (1%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
MD+S++ ++ + VK ++ L + SI++W+++ K RR+ R+ ++ +
Sbjct: 109 MDLSVWGMYQNADVVVKGVMIGLVLASIVTWTILFSKGTELFRARRRLRQEHEVIGAVTD 168
Query: 69 LETVCKSLKNHHNIGLAAIFM-SAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
L+T + ++ ++++ + A++E S + + GI++R ++ +A +
Sbjct: 169 LDTASERAEDFGQGSVSSLLLHEALNERLLSIESNDNN--GIKERTAFRLERRVAAIGRQ 226
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ + FL ++ + VG+ G V G+M F I + N+ I PGI E+L++ LGL
Sbjct: 227 MGKGNGFLATIGAISPFVGLFGTVWGIMNSFIGITHSQTTNLAVIAPGIAEALLATALGL 286
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANE 216
+IP+ + YN F + Q+ A +
Sbjct: 287 VAAIPAVVIYNIFARQIGNYRAQVGDVAAQ 316
>gi|253995474|ref|YP_003047538.1| MotA/TolQ/ExbB proton channel [Methylotenera mobilis JLW8]
gi|253982153|gb|ACT47011.1| MotA/TolQ/ExbB proton channel [Methylotenera mobilis JLW8]
Length = 241
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 105/207 (50%), Gaps = 7/207 (3%)
Query: 22 LAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHN 81
+ V+ ++ L S ++W++I+ KS+ +R+Q ++ FWS ++ ++ LK+H+
Sbjct: 11 IVVQAVLLTLIAGSFVTWTLILAKSLQVWLIRKQNVKYRAAFWSARNFQSAA-DLKDHNG 69
Query: 82 IG--LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMS 139
+A + + + + + + QD ++R + I +E L L S+
Sbjct: 70 PAYRVATVGFNVLKDIDSNTANDLQHFGDRQDVLERALRQQIQKERVTRESGLVVLASIG 129
Query: 140 SAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYN 197
S VG+ G V G+M +I G S +VV+ P I E+LI+ +G+ V++P+ +AYN
Sbjct: 130 STAPFVGLFGTVWGIMHALSAIGKTGSASLDVVAGP-IGEALIATAVGIAVAVPAVLAYN 188
Query: 198 KFIEDSKKFAMQMEGFANEFSAILSRQ 224
F+ K + ++ FA + LSR+
Sbjct: 189 FFLRRLKTSSNNLDDFAEDL-ITLSRK 214
>gi|254523737|ref|ZP_05135792.1| tonB-system energizer ExbB [Stenotrophomonas sp. SKA14]
gi|219721328|gb|EED39853.1| tonB-system energizer ExbB [Stenotrophomonas sp. SKA14]
Length = 234
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 99/216 (45%), Gaps = 10/216 (4%)
Query: 6 LAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS 65
+A ++ + +++ + VK ++ L + S+ +W+V++ K RQ R L
Sbjct: 1 MAAPALTPWGMYLAADVVVKGVMIALALASLATWTVLLAKGWELARQARQLRAARALLLQ 60
Query: 66 GQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
SL LA + +A +E + S D +R GI++R+ +D I E
Sbjct: 61 APSLPAESAEASAQQGTALA-MLEAARTELRLSQDLDSRD--GIKERVASRLD-RIELET 116
Query: 126 EEITEK-LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISIL 183
+ + + L S+ + VG+ G V G+M F IA + N+ V PGI E+L++
Sbjct: 117 ARLQRRGIGVLASIGAVAPFVGLFGTVWGIMNSFIGIAHSNTTNLAVVAPGIAEALLATA 176
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
LGL +IP+ + YN F + + G + SA
Sbjct: 177 LGLVAAIPAVLVYNHF----SRVLASLRGLLGDLSA 208
>gi|283479855|emb|CAY75771.1| Biopolymer transport exbB protein [Erwinia pyrifoliae DSM 12163]
Length = 337
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 95/192 (49%), Gaps = 2/192 (1%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
MD+S++ ++ + VK ++ L + S+ +W++ KS+ + R++ + + L +S
Sbjct: 101 MDLSVWGMYQHADIVVKAVMIGLLLASVATWAIFFSKSIELRSARKRLKREQLLLADARS 160
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
L+ + + + L +I + +E + G+ GI++R ++ +A
Sbjct: 161 LDEASQIGGDFQSQSL-SILLIKEAENELELSAGSDDNNGIKERTAFRLERRVAAIGRHP 219
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
FL ++ S VG+ G V G+M F IA + N+ V PGI E+L++ +GL
Sbjct: 220 GRGNGFLATIGSIAPFVGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGIAEALLATAIGLV 279
Query: 188 VSIPSSIAYNKF 199
+IP+ + YN F
Sbjct: 280 AAIPAVVIYNVF 291
>gi|66047708|ref|YP_237549.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. syringae
B728a]
gi|63258415|gb|AAY39511.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. syringae
B728a]
Length = 230
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 100/208 (48%), Gaps = 15/208 (7%)
Query: 20 MGLAVKCIIT-----LLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCK 74
M A +IT LL IFS+++W++++ K+ L RQ R + FW+ + L+
Sbjct: 1 MNTAYSVLITQSSMALLVIFSLVTWALLLGKTFQHWRLTRQNRRYATQFWAARDLKN--- 57
Query: 75 SLKNHHNIG----LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
+L H+ G L A++ S D G QD ++R + I +E +
Sbjct: 58 ALHLPHSEGSLARLTDAGAQALAAPHDSPDLG--HSWNRQDLLERSLRQQIHKERRRLES 115
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCVS 189
+ L S+ S +G+ G V G++ +I+ S ++ + G I E+L++ +G+ V+
Sbjct: 116 GMILLASIGSTAPFIGLFGTVFGIIHALSAISQAKSASIAVVAGPIGEALVATGVGIAVA 175
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFANEF 217
+P+ +AYN F K +E FA +F
Sbjct: 176 VPAVLAYNFFGRRLKLVIADLEEFAVDF 203
>gi|291613856|ref|YP_003524013.1| MotA/TolQ/ExbB proton channel [Sideroxydans lithotrophicus ES-1]
gi|291583968|gb|ADE11626.1| MotA/TolQ/ExbB proton channel [Sideroxydans lithotrophicus ES-1]
Length = 218
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 102/199 (51%), Gaps = 8/199 (4%)
Query: 24 VKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIG 83
V + LL + SI++WS+ + K ++ REF + FW+ + K +N
Sbjct: 12 VSATLALLILLSIVTWSIALFKLWKQWQAKQHDREFNECFWAVREWGDAEKVARNSQG-D 70
Query: 84 LAAIFMSAMSEWKK-SCDKGARSPIGI-QDRIDRMMDVAIARELEEITEK-LSFLGSMSS 140
+A + + +E K S D+ G QD ++RM+ + + ++ E+ L+ L S+ S
Sbjct: 71 IARLAQAGFAELKTLSADQQDLKHSGAPQDVLERMLRQQL-QNIQRYHERGLAELASIGS 129
Query: 141 AGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNK 198
+G+ G V G+M Q I +G S +VV+ P I E+LI+ +G+ ++P+ +AYN
Sbjct: 130 TSPFIGLFGTVWGIMHALQDIGRSGSASLDVVAGP-IGEALIATAIGIATALPAVLAYNF 188
Query: 199 FIEDSKKFAMQMEGFANEF 217
F+ K +E FA++F
Sbjct: 189 FLRRLKVHVTDLENFAHDF 207
>gi|262278935|ref|ZP_06056720.1| biopolymer transporter [Acinetobacter calcoaceticus RUH2202]
gi|262259286|gb|EEY78019.1| biopolymer transporter [Acinetobacter calcoaceticus RUH2202]
Length = 292
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 108/232 (46%), Gaps = 33/232 (14%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YGL AL+ + L K + +L + SI +W +II K + ++RQ +E E+
Sbjct: 66 NPYGLE-------ALWREGDLVAKSTLFILVLMSIGTWYIIISKFLQQAKVKRQGKEAEK 118
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPI----GIQDRID--R 115
FW SL+ +L+ S ++ +KG S + +RID
Sbjct: 119 SFWEATSLDNAADTLEQS-------------SAYRFIAEKGINSTKSHGGSLLERIDFNT 165
Query: 116 MMDVAIARELEEITEK----LSFLGSMSSAGLLVGILGAVLGMMGFFQS--IAGYYSNNV 169
+ ++I R +E+I L+FL ++ S VG+ G V G+ + I+G S +
Sbjct: 166 WVSISIQRAIEKIQNHLGGGLAFLATVGSTAPFVGLFGTVWGIYHALTAIGISGQASIDK 225
Query: 170 VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
V+ P + E+LI +GL V++P+ + YN +K + F ++ A+L
Sbjct: 226 VAGP-VGEALIMTAIGLAVAVPAVLGYNWLTRRNKAVMENVRSFGSDLHAVL 276
>gi|322435210|ref|YP_004217422.1| MotA/TolQ/ExbB proton channel [Acidobacterium sp. MP5ACTX9]
gi|321162937|gb|ADW68642.1| MotA/TolQ/ExbB proton channel [Acidobacterium sp. MP5ACTX9]
Length = 256
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 98/200 (49%), Gaps = 7/200 (3%)
Query: 21 GLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHH 80
G ++ +L + S+LSW+V+I K +F Q + F + F L + +
Sbjct: 36 GPVAMTVLIVLGLASLLSWTVMISKWRSFGAANTQSKRFLRAFRKSGRLSEISAVAEQFR 95
Query: 81 NIGLAAIFMSAMSEW-KKSCDKG-ARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSM 138
L A+F E+ +++ +G ++P G++ R A + L + E++++L ++
Sbjct: 96 PSPLVAVFTEINDEYYRQTNGRGLPKNPNGLE----RAAATASSEALTVMEERVTWLATI 151
Query: 139 SSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCVSIPSSIAYN 197
++ +G+ G V+G++ F + + + ++ PGI E+LI+ G+ V++P+ + YN
Sbjct: 152 ANIAPFIGLFGTVMGIIDAFHGLGASGTATLRAVAPGISEALITTAAGIVVAVPAVVGYN 211
Query: 198 KFIEDSKKFAMQMEGFANEF 217
+ FA + + F E
Sbjct: 212 HLTSQLRDFAARTDDFGREL 231
>gi|167647543|ref|YP_001685206.1| MotA/TolQ/ExbB proton channel [Caulobacter sp. K31]
gi|167349973|gb|ABZ72708.1| MotA/TolQ/ExbB proton channel [Caulobacter sp. K31]
Length = 299
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 104/218 (47%), Gaps = 7/218 (3%)
Query: 16 LFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKS 75
+F+ VK ++ L + S+ SW ++I K F L +Q +F + F +S+ + +
Sbjct: 79 MFLSAQAVVKVVMIGLILASVFSWVLLITKLFEFGALNKQSDKFLEAFRGARSIADIARI 138
Query: 76 LKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRM------MDVAIARELEEIT 129
+ G M+A + + + A +G + R + ++ A ++ ++
Sbjct: 139 GSSEEFEGNPMADMAAAAAQEVELSRQAGLAVGGEHRDSTLSRATYAINAVQASLVKRLS 198
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCV 188
+ FL S+ SAG +G+ G V G+M F IA + N+ V PGI E+L++ +GL
Sbjct: 199 GGMVFLASVGSAGPFIGLFGTVYGIMTSFIGIANTNTTNLAVVAPGIAEALLATGIGLFA 258
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ I YN F + + EGF E +SRQ +
Sbjct: 259 AIPAVIFYNFFQTRISGYGTRSEGFVAELMNAISRQLD 296
>gi|148550415|ref|YP_001270517.1| TonB-system energizer ExbB type-1 [Pseudomonas putida F1]
gi|148514473|gb|ABQ81333.1| TonB-system energizer ExbB type-1 [Pseudomonas putida F1]
Length = 324
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 101/217 (46%), Gaps = 6/217 (2%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFR-EFEQLFWSGQS 68
D+S + ++ + VK ++ L I SI++W++ I K + +R+ R E QL S
Sbjct: 95 DLSPWGMYKNADIVVKIVMIGLAIASIITWTIWIAKGFELMGAKRRLRGEIAQLKKSTTL 154
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
E + N + A+ E + S + AR GI++R+ ++ + +
Sbjct: 155 KE--ASEVSNKEGTLAHTLVHDALEEMRLSTN--AREKEGIKERVSFRLERLVHASGRTM 210
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
+ L ++ S VG+ G V G+M F IA + N+ V PGI E+L++ LGL
Sbjct: 211 SSGTGVLATIGSTAPFVGLFGTVWGIMNSFIGIAKTQTTNLAVVAPGIAEALLATALGLV 270
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+IP+ + YN F + Q+ + + ++SR
Sbjct: 271 AAIPAVVIYNVFARSIAGYKAQVSDASAQVLLLVSRD 307
>gi|298290782|ref|YP_003692721.1| tonB-system energizer ExbB [Starkeya novella DSM 506]
gi|296927293|gb|ADH88102.1| tonB-system energizer ExbB [Starkeya novella DSM 506]
Length = 357
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 105/225 (46%), Gaps = 21/225 (9%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S + +FM VK ++ L S+++W+V + KSV + + R + + SL
Sbjct: 122 DLSPWGMFMAADWVVKAVMIGLAFASVVTWTVWLAKSVELTFAKGRLRRALKGYLGAASL 181
Query: 70 ETVCKSLKNHHNIGLA----AIFMSAMSEWKKSCDKGARSPIGIQDRID---RMMDVAIA 122
E ++G A A+ + E K+S D A GI++R+ ++VA
Sbjct: 182 E-------EARDVGPAGPAGAMLRTTFLEVKRSGDLPAD---GIKERVSISLSRIEVAAG 231
Query: 123 RELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLIS 181
R IT L ++ + VG+ G V G+M F I+ + N+ V PGI E+L++
Sbjct: 232 RA---ITRGTGLLATIGATAPFVGLFGTVWGIMNSFIGISKAQTTNLAVVAPGIAEALLA 288
Query: 182 ILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+GL +IP+ + YN F + + + + E +LSR +
Sbjct: 289 TAIGLVAAIPAVVIYNHFSRQVSGYRLLLGDASAEVLRLLSRDLD 333
>gi|302038653|ref|YP_003798975.1| protein TolQ [Candidatus Nitrospira defluvii]
gi|300606717|emb|CBK43050.1| Protein TolQ [Candidatus Nitrospira defluvii]
Length = 240
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 102/227 (44%), Gaps = 15/227 (6%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
+ L +G K ++ LLF+ SILSW VI K F R+ + F F + L+ +
Sbjct: 6 VMGLVGSLGAVSKIVLLLLFVASILSWGVIFYKWRTFKAADREDQRFFSAFTKIRDLDEL 65
Query: 73 CKSLKNHHNIGLAAIFMSAMSEWKKSCDKG----------ARSPIGIQDR--IDRMMDVA 120
+ K A +F M G ++ P+ D +D+ +
Sbjct: 66 YRQSKRADGSPSARVFQGIMDRVLTVSGDGTVSASQSAGVSKDPVAAIDHQYMDKTVAYL 125
Query: 121 IARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESL 179
+ ++ + L L + + +G+LG VLG++ F+ I + ++ ++ PG+ E+L
Sbjct: 126 VQNQVSHLESYLPVLATTGNITPFIGLLGTVLGIIDSFREIGTQGTASIAAVAPGVSEAL 185
Query: 180 ISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
++ GL +IP+ I YN ++ +K ++E F E A+ S QT
Sbjct: 186 VATAAGLFTAIPAVIFYNYYLTRIRKTVFRIESFTVE--AMRSLQTR 230
>gi|238762418|ref|ZP_04623389.1| TonB complex protein [Yersinia kristensenii ATCC 33638]
gi|238699403|gb|EEP92149.1| TonB complex protein [Yersinia kristensenii ATCC 33638]
Length = 332
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 101/197 (51%), Gaps = 5/197 (2%)
Query: 5 GLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFW 64
GLA MD+S++ ++ + VK ++ L + SI++W+++ K RR+ R+ ++
Sbjct: 93 GLA-MDLSVWGMYQHADVVVKGVMIGLVLASIVTWTILFSKGTELFRARRRLRQEHEVIG 151
Query: 65 SGQSLETVCKSLKNHHNIGLAAIFM-SAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAR 123
+ L+T + + ++ + + A +E S + + GI++R ++ +A
Sbjct: 152 AVADLDTASERAEVFSPESISGLLLREAQNERLLSAESDDNN--GIKERTAFRLERRVAA 209
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISI 182
++ + FL ++ + VG+ G V G+M F IA + N+ V PGI E+L++
Sbjct: 210 IGRQMGKGNGFLATIGAISPFVGLFGTVWGIMNSFIGIAHSQTTNLAVVAPGIAEALLAT 269
Query: 183 LLGLCVSIPSSIAYNKF 199
LGL +IP+ + YN F
Sbjct: 270 ALGLVAAIPAVVIYNIF 286
>gi|330899683|gb|EGH31102.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. japonica
str. M301072PT]
gi|330940953|gb|EGH43894.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. pisi str.
1704B]
Length = 230
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 98/205 (47%), Gaps = 9/205 (4%)
Query: 20 MGLAVKCIIT-----LLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCK 74
M A +IT LL IFS+++W++++ K+ L RQ R + FW+ + L+
Sbjct: 1 MNTAYSVLITQSSMALLVIFSLVTWALLLGKTFQHWRLTRQNRRYATQFWAARDLKNALH 60
Query: 75 SLKNHHNIG-LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLS 133
+ ++ L A++ S D G QD ++R + I +E + +
Sbjct: 61 LPNSEGSLARLTDAGAQALAAPHDSPDLG--HSWNRQDLLERSLRQQIHKERRRLESGMI 118
Query: 134 FLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCVSIPS 192
L S+ S +G+ G V G++ +I+ S ++ + G I E+L++ +G+ V++P+
Sbjct: 119 LLASIGSTAPFIGLFGTVFGIIHALSAISQAKSASIAVVAGPIGEALVATGVGIAVAVPA 178
Query: 193 SIAYNKFIEDSKKFAMQMEGFANEF 217
+AYN F K +E FA +F
Sbjct: 179 VLAYNFFGRRLKLVIADLEEFAVDF 203
>gi|15965264|ref|NP_385617.1| biopolymer transport transmembrane protein [Sinorhizobium meliloti
1021]
gi|15074444|emb|CAC46090.1| Probable biopolymer transport transmembrane protein [Sinorhizobium
meliloti 1021]
Length = 328
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 103/219 (47%), Gaps = 3/219 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S +F+ + VK ++ L + S+ +W++ + K++ I + + + S L
Sbjct: 85 DLSPVGMFLAADIVVKAVMVALALASVATWAIFLVKTLELIYAKSRLKRAVAALVSANGL 144
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSP-IGIQDRIDRMMDVAIARELEEI 128
V L+ + + +A+ E +S +P +G+++R+ ++ R + +
Sbjct: 145 AEVQSKLERRAGVA-GEMVAAAIDEMTRSEAVLDLAPAVGVKERVSSLLTRIEVRAGKRM 203
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLC 187
+ L S+ S G VG+ G V G+M F I+ + N+ + PGI E+L++ +GL
Sbjct: 204 SAGTGILASIGSVGPFVGLFGTVWGIMNSFIGISKAQTTNLAIVAPGIAEALLATAIGLV 263
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ + YN F + + + A ++SR +
Sbjct: 264 AAIPAVVIYNYFARSVGGYKLILADAAAAVERLVSRDLD 302
>gi|62290541|ref|YP_222334.1| biopolymer transport protein ExbB [Brucella abortus bv. 1 str.
9-941]
gi|189024761|ref|YP_001935529.1| MotA/TolQ/ExbB proton channel [Brucella abortus S19]
gi|225853130|ref|YP_002733363.1| TonB-system energizer ExbB [Brucella melitensis ATCC 23457]
gi|254689838|ref|ZP_05153092.1| tonB-system energizer ExbB [Brucella abortus bv. 6 str. 870]
gi|254697986|ref|ZP_05159814.1| tonB-system energizer ExbB [Brucella abortus bv. 2 str. 86/8/59]
gi|254708464|ref|ZP_05170292.1| tonB-system energizer ExbB [Brucella pinnipedialis M163/99/10]
gi|254708684|ref|ZP_05170495.1| tonB-system energizer ExbB [Brucella pinnipedialis B2/94]
gi|254714531|ref|ZP_05176342.1| tonB-system energizer ExbB [Brucella ceti M644/93/1]
gi|254717429|ref|ZP_05179240.1| tonB-system energizer ExbB [Brucella ceti M13/05/1]
gi|254730872|ref|ZP_05189450.1| tonB-system energizer ExbB [Brucella abortus bv. 4 str. 292]
gi|256030210|ref|ZP_05443824.1| tonB-system energizer ExbB [Brucella pinnipedialis M292/94/1]
gi|256045279|ref|ZP_05448173.1| tonB-system energizer ExbB [Brucella melitensis bv. 1 str. Rev.1]
gi|256061708|ref|ZP_05451845.1| tonB-system energizer ExbB [Brucella neotomae 5K33]
gi|256114238|ref|ZP_05454983.1| tonB-system energizer ExbB [Brucella melitensis bv. 3 str. Ether]
gi|256160384|ref|ZP_05458074.1| tonB-system energizer ExbB [Brucella ceti M490/95/1]
gi|256255592|ref|ZP_05461128.1| tonB-system energizer ExbB [Brucella ceti B1/94]
gi|256258091|ref|ZP_05463627.1| tonB-system energizer ExbB [Brucella abortus bv. 9 str. C68]
gi|260167886|ref|ZP_05754697.1| tonB-system energizer ExbB [Brucella sp. F5/99]
gi|294850922|ref|ZP_06791598.1| biopolymer transporter ExbB [Brucella sp. NVSL 07-0026]
gi|62196673|gb|AAX74973.1| ExbB, biopolymer transport protein ExbB [Brucella abortus bv. 1
str. 9-941]
gi|189020333|gb|ACD73055.1| MotA/TolQ/ExbB proton channel [Brucella abortus S19]
gi|225641495|gb|ACO01409.1| tonB-system energizer ExbB [Brucella melitensis ATCC 23457]
gi|294821565|gb|EFG38561.1| biopolymer transporter ExbB [Brucella sp. NVSL 07-0026]
gi|326409679|gb|ADZ66744.1| MotA/TolQ/ExbB proton channel [Brucella melitensis M28]
Length = 307
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 94/192 (48%), Gaps = 3/192 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S + +FM VK ++ L I S+ +W+V + KS+ RR+ + ++ +L
Sbjct: 75 DLSPWGMFMAADWVVKAVMIGLAIASLATWTVWVAKSLELAGARRRANKALKIIGHSATL 134
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSP-IGIQDRIDRMMDVAIARELEEI 128
+L G AA +A E + S AR+ G+++R+ + A+ +
Sbjct: 135 NDAVHALDGAKGPG-AAFVRAAEDEVRLSGPALARAGGEGLKERVASRLSRIEAKAGRRL 193
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
+ L ++ S VG+ G V G+M F +I+ + N+ V PGI E+L++ +GL
Sbjct: 194 AKGTGILATIGSVAPFVGLFGTVWGIMNSFINISEAQTTNLAVVAPGIAEALLATAIGLV 253
Query: 188 VSIPSSIAYNKF 199
+IP+ + YN F
Sbjct: 254 AAIPAVVIYNVF 265
>gi|307309287|ref|ZP_07588955.1| tonB-system energizer ExbB [Sinorhizobium meliloti BL225C]
gi|306900288|gb|EFN30905.1| tonB-system energizer ExbB [Sinorhizobium meliloti BL225C]
Length = 328
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 103/219 (47%), Gaps = 3/219 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S +F+ + VK ++ L + S+ +W++ + K++ I + + + S L
Sbjct: 85 DLSPVGMFLAADIVVKAVMVALALASVATWAIFLVKTLELIYAKSRLKRAVAALVSANGL 144
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSP-IGIQDRIDRMMDVAIARELEEI 128
V L+ + + +A+ E +S +P +G+++R+ ++ R + +
Sbjct: 145 AEVQSKLERRAGVA-GEMVAAAIDEMTRSEAVLDLAPAVGVKERVSSLLTRIEVRAGKRM 203
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLC 187
+ L S+ S G VG+ G V G+M F I+ + N+ + PGI E+L++ +GL
Sbjct: 204 SAGTGILASIGSVGPFVGLFGTVWGIMNSFIGISKAQTTNLAIVAPGIAEALLATAIGLV 263
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ + YN F + + + A ++SR +
Sbjct: 264 AAIPAVVIYNYFARSVGGYKLILADAAAAVERLVSRDLD 302
>gi|161619600|ref|YP_001593487.1| tonB-system energizer ExbB [Brucella canis ATCC 23365]
gi|254703450|ref|ZP_05165278.1| tonB-system energizer ExbB [Brucella suis bv. 3 str. 686]
gi|161336411|gb|ABX62716.1| tonB-system energizer ExbB [Brucella canis ATCC 23365]
Length = 307
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 94/192 (48%), Gaps = 3/192 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S + +FM VK ++ L I S+ +W+V + KS+ RR+ + ++ +L
Sbjct: 75 DLSPWGMFMAADWVVKAVMIGLAIASLATWTVWVAKSLELAGARRRANKALKIIGHSATL 134
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSP-IGIQDRIDRMMDVAIARELEEI 128
+L G AA +A E + S AR+ G+++R+ + A+ +
Sbjct: 135 NDAVHALDGAKGPG-AAFVRAAEDEVRLSGPALARAGGEGLKERVASRLSRIEAKAGRRL 193
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
+ L ++ S VG+ G V G+M F +I+ + N+ V PGI E+L++ +GL
Sbjct: 194 AKGTGILATIGSVAPFVGLFGTVWGIMNSFINISEAQTTNLAVVAPGIAEALLATAIGLV 253
Query: 188 VSIPSSIAYNKF 199
+IP+ + YN F
Sbjct: 254 AAIPAVVIYNVF 265
>gi|163845249|ref|YP_001622904.1| hypothetical protein BSUIS_B1144 [Brucella suis ATCC 23445]
gi|163675972|gb|ABY40082.1| Hypothetical protein, conserved [Brucella suis ATCC 23445]
Length = 307
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 94/192 (48%), Gaps = 3/192 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S + +FM VK ++ L I S+ +W+V + KS+ RR+ + ++ +L
Sbjct: 75 DLSPWGMFMAADWVVKAVMIGLAIASLATWTVWVAKSLELAGARRRANKALKIIGHSATL 134
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSP-IGIQDRIDRMMDVAIARELEEI 128
+L G AA +A E + S AR+ G+++R+ + A+ +
Sbjct: 135 NDAVHALDGAKGPG-AAFVRAAEDEVRLSGPALARAGGEGLKERVASHLSRIEAKAGRRL 193
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
+ L ++ S VG+ G V G+M F +I+ + N+ V PGI E+L++ +GL
Sbjct: 194 AKGTGILATIGSVAPFVGLFGTVWGIMNSFINISEAQTTNLAVVAPGIAEALLATAIGLV 253
Query: 188 VSIPSSIAYNKF 199
+IP+ + YN F
Sbjct: 254 AAIPAVVIYNVF 265
>gi|225628238|ref|ZP_03786272.1| tonB-system energizer ExbB [Brucella ceti str. Cudo]
gi|237816045|ref|ZP_04595041.1| tonB-system energizer ExbB [Brucella abortus str. 2308 A]
gi|260547212|ref|ZP_05822950.1| ExbB protein [Brucella abortus NCTC 8038]
gi|260565827|ref|ZP_05836310.1| ExbB family protein [Brucella melitensis bv. 1 str. 16M]
gi|260755371|ref|ZP_05867719.1| biopolymer transporter ExbB [Brucella abortus bv. 6 str. 870]
gi|260758592|ref|ZP_05870940.1| biopolymer transporter ExbB [Brucella abortus bv. 4 str. 292]
gi|260762424|ref|ZP_05874761.1| biopolymer transporter ExbB [Brucella abortus bv. 2 str. 86/8/59]
gi|260884387|ref|ZP_05896001.1| ExbB [Brucella abortus bv. 9 str. C68]
gi|261219261|ref|ZP_05933542.1| biopolymer transporter ExbB [Brucella ceti M13/05/1]
gi|261222797|ref|ZP_05937078.1| ExbB [Brucella ceti B1/94]
gi|261315961|ref|ZP_05955158.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|261316176|ref|ZP_05955373.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261322322|ref|ZP_05961519.1| ExbB [Brucella ceti M644/93/1]
gi|261325712|ref|ZP_05964909.1| ExbB [Brucella neotomae 5K33]
gi|261757325|ref|ZP_06001034.1| biopolymer transporter ExbB [Brucella sp. F5/99]
gi|265987240|ref|ZP_06099797.1| ExbB [Brucella pinnipedialis M292/94/1]
gi|265991707|ref|ZP_06104264.1| ExbB [Brucella melitensis bv. 1 str. Rev.1]
gi|265995544|ref|ZP_06108101.1| ExbB [Brucella melitensis bv. 3 str. Ether]
gi|265998755|ref|ZP_06111312.1| ExbB [Brucella ceti M490/95/1]
gi|297248943|ref|ZP_06932651.1| biopolymer transporter ExbB [Brucella abortus bv. 5 str. B3196]
gi|12802721|gb|AAK08069.1| ExbB [Brucella melitensis]
gi|225616084|gb|EEH13132.1| tonB-system energizer ExbB [Brucella ceti str. Cudo]
gi|237788708|gb|EEP62920.1| tonB-system energizer ExbB [Brucella abortus str. 2308 A]
gi|260095577|gb|EEW79455.1| ExbB protein [Brucella abortus NCTC 8038]
gi|260151200|gb|EEW86295.1| ExbB family protein [Brucella melitensis bv. 1 str. 16M]
gi|260668910|gb|EEX55850.1| biopolymer transporter ExbB [Brucella abortus bv. 4 str. 292]
gi|260672850|gb|EEX59671.1| biopolymer transporter ExbB [Brucella abortus bv. 2 str. 86/8/59]
gi|260675479|gb|EEX62300.1| biopolymer transporter ExbB [Brucella abortus bv. 6 str. 870]
gi|260873915|gb|EEX80984.1| ExbB [Brucella abortus bv. 9 str. C68]
gi|260921381|gb|EEX88034.1| ExbB [Brucella ceti B1/94]
gi|260924350|gb|EEX90918.1| biopolymer transporter ExbB [Brucella ceti M13/05/1]
gi|261295012|gb|EEX98508.1| ExbB [Brucella ceti M644/93/1]
gi|261295399|gb|EEX98895.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261301692|gb|EEY05189.1| ExbB [Brucella neotomae 5K33]
gi|261304987|gb|EEY08484.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|261737309|gb|EEY25305.1| biopolymer transporter ExbB [Brucella sp. F5/99]
gi|262553444|gb|EEZ09213.1| ExbB [Brucella ceti M490/95/1]
gi|262766828|gb|EEZ12446.1| ExbB [Brucella melitensis bv. 3 str. Ether]
gi|263002663|gb|EEZ15066.1| ExbB [Brucella melitensis bv. 1 str. Rev.1]
gi|264659437|gb|EEZ29698.1| ExbB [Brucella pinnipedialis M292/94/1]
gi|297174076|gb|EFH33433.1| biopolymer transporter ExbB [Brucella abortus bv. 5 str. B3196]
Length = 319
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 94/192 (48%), Gaps = 3/192 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S + +FM VK ++ L I S+ +W+V + KS+ RR+ + ++ +L
Sbjct: 87 DLSPWGMFMAADWVVKAVMIGLAIASLATWTVWVAKSLELAGARRRANKALKIIGHSATL 146
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSP-IGIQDRIDRMMDVAIARELEEI 128
+L G AA +A E + S AR+ G+++R+ + A+ +
Sbjct: 147 NDAVHALDGAKGPG-AAFVRAAEDEVRLSGPALARAGGEGLKERVASRLSRIEAKAGRRL 205
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
+ L ++ S VG+ G V G+M F +I+ + N+ V PGI E+L++ +GL
Sbjct: 206 AKGTGILATIGSVAPFVGLFGTVWGIMNSFINISEAQTTNLAVVAPGIAEALLATAIGLV 265
Query: 188 VSIPSSIAYNKF 199
+IP+ + YN F
Sbjct: 266 AAIPAVVIYNVF 277
>gi|260568758|ref|ZP_05839226.1| ExbB family protein [Brucella suis bv. 4 str. 40]
gi|261754080|ref|ZP_05997789.1| biopolymer transporter ExbB [Brucella suis bv. 3 str. 686]
gi|260154142|gb|EEW89224.1| ExbB family protein [Brucella suis bv. 4 str. 40]
gi|261743833|gb|EEY31759.1| biopolymer transporter ExbB [Brucella suis bv. 3 str. 686]
Length = 319
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 94/192 (48%), Gaps = 3/192 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S + +FM VK ++ L I S+ +W+V + KS+ RR+ + ++ +L
Sbjct: 87 DLSPWGMFMAADWVVKAVMIGLAIASLATWTVWVAKSLELAGARRRANKALKIIGHSATL 146
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSP-IGIQDRIDRMMDVAIARELEEI 128
+L G AA +A E + S AR+ G+++R+ + A+ +
Sbjct: 147 NDAVHALDGAKGPG-AAFVRAAEDEVRLSGPALARAGGEGLKERVASRLSRIEAKAGRRL 205
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
+ L ++ S VG+ G V G+M F +I+ + N+ V PGI E+L++ +GL
Sbjct: 206 AKGTGILATIGSVAPFVGLFGTVWGIMNSFINISEAQTTNLAVVAPGIAEALLATAIGLV 265
Query: 188 VSIPSSIAYNKF 199
+IP+ + YN F
Sbjct: 266 AAIPAVVIYNVF 277
>gi|265999347|ref|ZP_05465915.2| ExbB [Brucella melitensis bv. 2 str. 63/9]
gi|263093380|gb|EEZ17449.1| ExbB [Brucella melitensis bv. 2 str. 63/9]
Length = 319
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 94/192 (48%), Gaps = 3/192 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S + +FM VK ++ L I S+ +W+V + KS+ RR+ + ++ +L
Sbjct: 87 DLSPWGMFMAADWVVKAVMIGLAIASLATWTVWVAKSLELAGARRRANKALKIIGHSATL 146
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSP-IGIQDRIDRMMDVAIARELEEI 128
+L G AA +A E + S AR+ G+++R+ + A+ +
Sbjct: 147 NDAVHALDGAKGPG-AAFVRAAEDEVRLSGPALARAGGEGLKERVASRLSRIEAKAGRRL 205
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
+ L ++ S VG+ G V G+M F +I+ + N+ V PGI E+L++ +GL
Sbjct: 206 AKGTGILATIGSVAPFVGLFGTVWGIMNSFINISEAQTTNLAVVAPGIAEALLATAIGLV 265
Query: 188 VSIPSSIAYNKF 199
+IP+ + YN F
Sbjct: 266 AAIPAVVIYNVF 277
>gi|82700456|ref|YP_415030.1| MotA/TolQ/ExbB proton channel [Brucella melitensis biovar Abortus
2308]
gi|256370079|ref|YP_003107590.1| biopolymer transport protein ExbB [Brucella microti CCM 4915]
gi|82616557|emb|CAJ11635.1| MotA/TolQ/ExbB proton channel [Brucella melitensis biovar Abortus
2308]
gi|256000242|gb|ACU48641.1| biopolymer transport protein ExbB [Brucella microti CCM 4915]
gi|326539386|gb|ADZ87601.1| TonB-system energizer ExbB [Brucella melitensis M5-90]
Length = 292
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 94/192 (48%), Gaps = 3/192 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S + +FM VK ++ L I S+ +W+V + KS+ RR+ + ++ +L
Sbjct: 60 DLSPWGMFMAADWVVKAVMIGLAIASLATWTVWVAKSLELAGARRRANKALKIIGHSATL 119
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSP-IGIQDRIDRMMDVAIARELEEI 128
+L G AA +A E + S AR+ G+++R+ + A+ +
Sbjct: 120 NDAVHALDGAKGPG-AAFVRAAEDEVRLSGPALARAGGEGLKERVASRLSRIEAKAGRRL 178
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
+ L ++ S VG+ G V G+M F +I+ + N+ V PGI E+L++ +GL
Sbjct: 179 AKGTGILATIGSVAPFVGLFGTVWGIMNSFINISEAQTTNLAVVAPGIAEALLATAIGLV 238
Query: 188 VSIPSSIAYNKF 199
+IP+ + YN F
Sbjct: 239 AAIPAVVIYNVF 250
>gi|116619648|ref|YP_821804.1| MotA/TolQ/ExbB proton channel [Candidatus Solibacter usitatus
Ellin6076]
gi|116222810|gb|ABJ81519.1| MotA/TolQ/ExbB proton channel [Candidatus Solibacter usitatus
Ellin6076]
Length = 237
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 109/217 (50%), Gaps = 3/217 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
++ ++ + G A K ++ +L FS+ SW+ I K R+ F + F
Sbjct: 19 LLQTDLWDMVQHTGPAGKVVLVVLVFFSVSSWTFIFSKLSALRGARQSNARFLRAFRKSS 78
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+E V + + L A+F E ++ +R I + ++R + + + E+ +
Sbjct: 79 GMEAVMVASEQFRPSPLVAVFDFGYEELERQVK--SRGSIVNRTALERTLQLGVNEEISK 136
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ +S+L + +S +G+LG VLG++ F+ ++ S ++ +I PGI E+LI+ +GL
Sbjct: 137 LERNMSWLATTASVTPFIGLLGTVLGIIRAFEDLSQMGSTSIKAIGPGIAEALITTAVGL 196
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
+IP+++ YN F +++ +M+ FA EF + R
Sbjct: 197 FAAIPAAVFYNYFGHVTREIGARMDDFAMEFLNMADR 233
>gi|23502525|ref|NP_698652.1| biopolymer transport protein ExbB [Brucella suis 1330]
gi|23348523|gb|AAN30567.1| biopolymer transport protein ExbB [Brucella suis 1330]
Length = 292
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 94/192 (48%), Gaps = 3/192 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S + +FM VK ++ L I S+ +W+V + KS+ RR+ + ++ +L
Sbjct: 60 DLSPWGMFMAADWVVKAVMIGLAIASLATWTVWVAKSLELAGARRRANKALKIIGHSATL 119
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSP-IGIQDRIDRMMDVAIARELEEI 128
+L G AA +A E + S AR+ G+++R+ + A+ +
Sbjct: 120 NDAVHALDGAKGPG-AAFVRAAEDEVRLSGPALARAGGEGLKERVASRLSRIEAKAGRRL 178
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
+ L ++ S VG+ G V G+M F +I+ + N+ V PGI E+L++ +GL
Sbjct: 179 AKGTGILATIGSVAPFVGLFGTVWGIMNSFINISEAQTTNLAVVAPGIAEALLATAIGLV 238
Query: 188 VSIPSSIAYNKF 199
+IP+ + YN F
Sbjct: 239 AAIPAVVIYNVF 250
>gi|261214638|ref|ZP_05928919.1| biopolymer transporter ExbD [Brucella abortus bv. 3 str. Tulya]
gi|260916245|gb|EEX83106.1| biopolymer transporter ExbD [Brucella abortus bv. 3 str. Tulya]
Length = 319
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 94/192 (48%), Gaps = 3/192 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S + +FM VK ++ L I S+ +W+V + KS+ RR+ + ++ +L
Sbjct: 87 DLSPWGMFMAADWVVKAVMIGLAIASLATWTVWVAKSLELAGARRRANKALKIIGHSATL 146
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSP-IGIQDRIDRMMDVAIARELEEI 128
+L G AA +A E + S AR+ G+++R+ + A+ +
Sbjct: 147 NDAVHALDGAKGPG-AAFVRAAEDEVRLSGPALARAGGEGLKERVASRLSRIEAKAGRRL 205
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
+ L ++ S VG+ G V G+M F +I+ + N+ V PGI E+L++ +GL
Sbjct: 206 AKGTGILATIGSVAPFVGLFGTVWGIMNSFINISEAQTTNLAVVAPGIAEALLATAIGLV 265
Query: 188 VSIPSSIAYNKF 199
+IP+ + YN F
Sbjct: 266 AAIPAVVIYNVF 277
>gi|27379017|ref|NP_770546.1| biopolymer transport protein [Bradyrhizobium japonicum USDA 110]
gi|27352167|dbj|BAC49171.1| biopolymer transport protein [Bradyrhizobium japonicum USDA 110]
Length = 326
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 96/201 (47%), Gaps = 4/201 (1%)
Query: 7 AIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG 66
A+ ++S + +FM + VK ++ L S+++W+V+I KS+ + R +
Sbjct: 97 AMKELSPWVMFMSADVIVKAVMIGLAFASLMTWTVLIAKSIELSVASGRLRSALKKISEA 156
Query: 67 QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
+SL +L I L + +A+ E + S G S GI++R + E
Sbjct: 157 RSLAEAQMALGTKEGI-LPSFLAAALREARMSA--GLSSDAGIKERAASSFSEIVRAEAR 213
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLG 185
I + L ++ S VG+ G V G+M F I+ + N+ V PGI E+L++ +G
Sbjct: 214 RIRIGMGVLATIGSTSPFVGLFGTVWGIMNSFIGISKSQTTNLAVVAPGIAEALLATAIG 273
Query: 186 LCVSIPSSIAYNKFIEDSKKF 206
L +IP+ I YN F +K +
Sbjct: 274 LVAAIPAVIIYNHFSRVTKSY 294
>gi|310816769|ref|YP_003964733.1| tonB-system energizer ExbB [Ketogulonicigenium vulgare Y25]
gi|308755504|gb|ADO43433.1| tonB-system energizer ExbB [Ketogulonicigenium vulgare Y25]
Length = 311
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 96/199 (48%), Gaps = 7/199 (3%)
Query: 5 GLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFW 64
GL D+S ++ Q + VK ++ L +I++W V++ K + R + R +L
Sbjct: 79 GLGGHDMSPMGMYNQADVVVKSVMIGLAAAAIVTWIVLVAKWLQLTGARGRARRTLRLLE 138
Query: 65 SGQSLETVCKSLKNHHNIGLAAIFMSAMS-EWKKSCDK-GARSPIGIQDRI-DRMMDVAI 121
+SL +L G A+ + A S E S D G G+++R+ RM + I
Sbjct: 139 QSRSLSDASAALAGRS--GAPALLVRAASDEIAASQDVLGQVDGEGVKERVASRMNRIEI 196
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLI 180
A I + L ++ S G VG+ G V G+M F IA + N+ V PGI E+L+
Sbjct: 197 AAG-RRIGRGVGLLATIGSVGPFVGLFGTVWGIMNSFIGIAETQTTNLAVVAPGIAEALL 255
Query: 181 SILLGLCVSIPSSIAYNKF 199
+ LGL +IP+ + YN F
Sbjct: 256 ATALGLVAAIPAVVIYNGF 274
>gi|254694330|ref|ZP_05156158.1| tonB-system energizer ExbB [Brucella abortus bv. 3 str. Tulya]
Length = 307
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 94/192 (48%), Gaps = 3/192 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S + +FM VK ++ L I S+ +W+V + KS+ RR+ + ++ +L
Sbjct: 75 DLSPWGMFMAADWVVKAVMIGLAIASLATWTVWVAKSLELAGARRRANKALKIIGHSATL 134
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSP-IGIQDRIDRMMDVAIARELEEI 128
+L G AA +A E + S AR+ G+++R+ + A+ +
Sbjct: 135 NDAVHALDGAKGPG-AAFVRAAEDEVRLSGPALARAGGEGLKERVASRLSRIEAKAGRRL 193
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
+ L ++ S VG+ G V G+M F +I+ + N+ V PGI E+L++ +GL
Sbjct: 194 AKGTGILATIGSVAPFVGLFGTVWGIMNSFINISEAQTTNLAVVAPGIAEALLATAIGLV 253
Query: 188 VSIPSSIAYNKF 199
+IP+ + YN F
Sbjct: 254 AAIPAVVIYNVF 265
>gi|332283867|ref|YP_004415778.1| putative TolQ-like translocation protein [Pusillimonas sp. T7-7]
gi|330427820|gb|AEC19154.1| putative TolQ-like translocation protein [Pusillimonas sp. T7-7]
Length = 293
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 98/208 (47%), Gaps = 15/208 (7%)
Query: 25 KCIITLLFIFSILSWSVIIQKSVNFITLRRQFR--EFEQLFWSGQSLETVCKSLKNH-HN 81
K + +L I S++SW +I KS F+ +R Q R +F + FW+ SLE V + H N
Sbjct: 68 KSLFGILVIMSVVSWYLIFVKS--FMNMRVQLRSNKFLREFWAASSLEQVENEIATHGAN 125
Query: 82 IGLAAIFMSAMSEWKKSCDKGARSPIGIQDR------IDRMMDVAIARELEEITEKLSFL 135
A + A+ GA + ++++ I R + I E + L+ L
Sbjct: 126 EPFAHLASHAIHARNHHAKYGA---LKLEEKGSTSAFITRTIRKVIDEETARLENGLTVL 182
Query: 136 GSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCVSIPSSI 194
S+ S VG+ G V G+ I V I G + E+LI LGL V+IP+ +
Sbjct: 183 ASIGSTAPFVGLFGTVWGVYHALIGIGLSDGVTVNRIAGPVGEALIMTGLGLAVAIPAVL 242
Query: 195 AYNKFIEDSKKFAMQMEGFANEFSAILS 222
AYN F+ ++ + +++ FA++ LS
Sbjct: 243 AYNGFVRGNRVYLARLDAFAHDLFTFLS 270
>gi|330817740|ref|YP_004361445.1| Biopolymer transport protein [Burkholderia gladioli BSR3]
gi|327370133|gb|AEA61489.1| Biopolymer transport protein [Burkholderia gladioli BSR3]
Length = 244
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 97/230 (42%), Gaps = 22/230 (9%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
M +YG+A ++ Q + I L I S+LSW VII K N + L R + E
Sbjct: 1 MESYGIA-------HVWAQGDFVTRFIAIALLIMSVLSWLVIIVKGWNVMRLGRLMKNAE 53
Query: 61 QLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRID------ 114
Q FW + + L++ F++ +++ + ++ + DR+D
Sbjct: 54 QSFWHSDEFDKGVQKLRDASPTTQDNPFLALALAGQEAAEHHQQTQPHLHDRMDVSDWVT 113
Query: 115 ----RMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
MD +AR + L+ L S+ S VG+ G V G+ I ++
Sbjct: 114 RCLKDTMDDGVAR----MQSGLAILASIGSTAPFVGLFGTVWGIYHALLVIGATGQTSID 169
Query: 171 SIPGII-ESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
+ G + ESLI GL V+IP+ + YN +K ++ FA+ A
Sbjct: 170 QVAGPVGESLIMTAFGLFVAIPAVLGYNALTRANKGIVTKLRRFAHGLHA 219
>gi|265984685|ref|ZP_06097420.1| biopolymer transport channel protein [Brucella sp. 83/13]
gi|264663277|gb|EEZ33538.1| biopolymer transport channel protein [Brucella sp. 83/13]
Length = 319
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 94/192 (48%), Gaps = 3/192 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S + +FM VK ++ L I S+ +W+V + KS+ RR+ + ++ +L
Sbjct: 87 DLSPWGMFMAADWVVKAVMIGLAIASLATWTVWVAKSLELAGARRRANKALKVIGHSATL 146
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSP-IGIQDRIDRMMDVAIARELEEI 128
+L G AA +A E + S AR+ G+++R+ + A+ +
Sbjct: 147 NDAVHALDGAKGPG-AAFVRAAEDEVRLSGPALARAGGEGLKERVASRLSRIEAKAGRRL 205
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
+ L ++ S VG+ G V G+M F +I+ + N+ V PGI E+L++ +GL
Sbjct: 206 AKGTGILATIGSVAPFVGLFGTVWGIMNSFINISEAQTTNLAVVAPGIAEALLATAIGLV 265
Query: 188 VSIPSSIAYNKF 199
+IP+ + YN F
Sbjct: 266 AAIPAVVIYNVF 277
>gi|299770380|ref|YP_003732406.1| biopolymer transport protein [Acinetobacter sp. DR1]
gi|298700468|gb|ADI91033.1| biopolymer transport protein [Acinetobacter sp. DR1]
Length = 292
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 108/232 (46%), Gaps = 33/232 (14%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YGL AL+ + L K + +L + SI +W +II K + ++RQ +E E+
Sbjct: 66 NPYGLE-------ALWREGDLVAKSTLFILVLMSIGTWYIIISKFLQQAKVKRQGKEAEK 118
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPI----GIQDRID--R 115
FW SL+ +L+ S ++ +KG S + +RID
Sbjct: 119 SFWEATSLDNAADNLEQS-------------SAYRFIAEKGINSTKSHGGSLLERIDFNT 165
Query: 116 MMDVAIARELEEITEK----LSFLGSMSSAGLLVGILGAVLGMMGFFQS--IAGYYSNNV 169
+ ++I R +E+I L+FL ++ S VG+ G V G+ + I+G S +
Sbjct: 166 WVSISIQRAIEKIQNHLGGGLAFLATVGSTAPFVGLFGTVWGIYHALTAIGISGQASIDK 225
Query: 170 VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
V+ P + E+LI +GL V++P+ + YN +K + F ++ A+L
Sbjct: 226 VAGP-VGEALIMTAIGLAVAVPAVLGYNWLTRRNKAVMENVRSFGSDLHAVL 276
>gi|17986648|ref|NP_539282.1| biopolymer transport EXBB protein [Brucella melitensis bv. 1 str.
16M]
gi|17982264|gb|AAL51546.1| biopolymer transport exbb protein [Brucella melitensis bv. 1 str.
16M]
Length = 290
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 94/192 (48%), Gaps = 3/192 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S + +FM VK ++ L I S+ +W+V + KS+ RR+ + ++ +L
Sbjct: 58 DLSPWGMFMAADWVVKAVMIGLAIASLATWTVWVAKSLELAGARRRANKALKIIGHSATL 117
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSP-IGIQDRIDRMMDVAIARELEEI 128
+L G AA +A E + S AR+ G+++R+ + A+ +
Sbjct: 118 NDAVHALDGAKGPG-AAFVRAAEDEVRLSGPALARAGGEGLKERVASRLSRIEAKAGRRL 176
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
+ L ++ S VG+ G V G+M F +I+ + N+ V PGI E+L++ +GL
Sbjct: 177 AKGTGILATIGSVAPFVGLFGTVWGIMNSFINISEAQTTNLAVVAPGIAEALLATAIGLV 236
Query: 188 VSIPSSIAYNKF 199
+IP+ + YN F
Sbjct: 237 AAIPAVVIYNVF 248
>gi|262375664|ref|ZP_06068896.1| TolQ [Acinetobacter lwoffii SH145]
gi|262309267|gb|EEY90398.1| TolQ [Acinetobacter lwoffii SH145]
Length = 293
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 110/228 (48%), Gaps = 25/228 (10%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YGL A++ + + K + +L I SI +W ++I K + +R+Q +E E
Sbjct: 67 NPYGLE-------AMWKEGDMVSKVTLFILVIMSIGTWYIMISKCLQQSKIRKQAKEAEH 119
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRID--RMMDV 119
FW SL+ ++L A+++ + KS + + +RID + +
Sbjct: 120 QFWESSSLDNATENLDE------ASVYRFIAEKGIKSTKNHGGT---LLERIDFNTWVTI 170
Query: 120 AIARELEEITEKLS----FLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIP 173
+I+R +++I LS FL ++ S VG+ G V G+ +I +G S + V+ P
Sbjct: 171 SISRAIDKIQNHLSGGLAFLATVGSTAPFVGLFGTVWGIYHALTAIGVSGQASIDKVAGP 230
Query: 174 GIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+ E+LI +GL V++P+ + YN +K ++ F ++ A+L
Sbjct: 231 -VGEALIMTAIGLAVAVPAVLGYNWLTRRNKAVMEEVRTFGSDLHAVL 277
>gi|254719671|ref|ZP_05181482.1| tonB-system energizer ExbB [Brucella sp. 83/13]
gi|306840053|ref|ZP_07472840.1| tonB-system energizer ExbB [Brucella sp. NF 2653]
gi|306404867|gb|EFM61159.1| tonB-system energizer ExbB [Brucella sp. NF 2653]
Length = 307
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 94/192 (48%), Gaps = 3/192 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S + +FM VK ++ L I S+ +W+V + KS+ RR+ + ++ +L
Sbjct: 75 DLSPWGMFMAADWVVKAVMIGLAIASLATWTVWVAKSLELAGARRRANKALKVIGHSATL 134
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSP-IGIQDRIDRMMDVAIARELEEI 128
+L G AA +A E + S AR+ G+++R+ + A+ +
Sbjct: 135 NDAVHALDGAKGPG-AAFVRAAEDEVRLSGPALARAGGEGLKERVASRLSRIEAKAGRRL 193
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
+ L ++ S VG+ G V G+M F +I+ + N+ V PGI E+L++ +GL
Sbjct: 194 AKGTGILATIGSVAPFVGLFGTVWGIMNSFINISEAQTTNLAVVAPGIAEALLATAIGLV 253
Query: 188 VSIPSSIAYNKF 199
+IP+ + YN F
Sbjct: 254 AAIPAVVIYNVF 265
>gi|330890916|gb|EGH23577.1| TonB system transport protein ExbB1 [Pseudomonas syringae pv. mori
str. 301020]
Length = 317
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 105/226 (46%), Gaps = 5/226 (2%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N+ G+A D+S + ++ + VK ++ L I SI++W++ I K + +R+ R
Sbjct: 77 NSLGMA-HDLSPWGMYQNADVVVKAVMIGLAIASIITWTIWISKGFELLGAKRRLRGEIV 135
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
+SL + + + A+ E + S + R GI++R+ ++ +
Sbjct: 136 NLKKARSLNEASSTASKEGTLA-HLLVHDALEEMRLSANSRERE--GIKERVSFRLERLV 192
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLI 180
A ++ S L ++ S VG+ G V G+M F IA + N+ V PGI E+L+
Sbjct: 193 AACGRNMSMGTSVLATIGSTAPFVGLFGTVWGIMNSFIGIAKTQTTNLAVVAPGIAEALL 252
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+ LGL +IP+ + YN F + Q+ + ++SR +
Sbjct: 253 ATALGLVAAIPAVVIYNVFARSIAGYKAQVSDASAHVLLLVSRDLD 298
>gi|238789157|ref|ZP_04632945.1| TonB complex protein [Yersinia frederiksenii ATCC 33641]
gi|238722689|gb|EEQ14341.1| TonB complex protein [Yersinia frederiksenii ATCC 33641]
Length = 333
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 101/197 (51%), Gaps = 5/197 (2%)
Query: 5 GLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFW 64
GLA MD+S++ ++ + VK ++ L + SI++W+++ K RR+ ++ ++
Sbjct: 94 GLA-MDLSVWGMYQHADVVVKGVMIGLVLASIVTWTILFSKGTELFRARRRLQQEHEVIG 152
Query: 65 SGQSLETVCKSLKNHHNIGLAAIFM-SAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAR 123
+ L+T + + ++ + + A +E S + + GI++R ++ +A
Sbjct: 153 AVTDLDTASERAEAFSTDSISGLLLREAQNERLLSAESNDNN--GIKERTAFRLERRVAA 210
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISI 182
++ + FL ++ + VG+ G V G+M F IA + N+ V PGI E+L++
Sbjct: 211 ISRQMGKGNGFLATIGAISPFVGLFGTVWGIMNSFIGIAHSQTTNLAVVAPGIAEALLAT 270
Query: 183 LLGLCVSIPSSIAYNKF 199
LGL +IP+ + YN F
Sbjct: 271 ALGLVAAIPAVVIYNIF 287
>gi|237797794|ref|ZP_04586255.1| TonB system transport protein ExbB1 [Pseudomonas syringae pv.
oryzae str. 1_6]
gi|331020644|gb|EGI00701.1| TonB system transport protein ExbB1 [Pseudomonas syringae pv.
oryzae str. 1_6]
Length = 313
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 104/226 (46%), Gaps = 5/226 (2%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N+ G+A D+S + ++ + VK ++ L I SI++W++ I K + +R+ R
Sbjct: 73 NSLGMA-HDLSPWGMYQNADVVVKAVMIGLAIASIITWTIWISKGFELLGAKRRLRGEIA 131
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
+SL S + + A+ E + S + R GI++R+ ++ +
Sbjct: 132 NLKKARSLNEASASASKEGTLA-HLLVHDALEEMRLSANSRERE--GIKERVSFRLERLV 188
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLI 180
A ++ L ++ S VG+ G V G+M F IA + N+ V PGI E+L+
Sbjct: 189 AACGRNMSMGTGVLATIGSTAPFVGLFGTVWGIMNSFIGIAKTQTTNLAVVAPGIAEALL 248
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+ LGL +IP+ + YN F + Q+ + ++SR +
Sbjct: 249 ATALGLVAAIPAVVIYNVFARSIAGYKAQVSDASAHVLLLVSRDLD 294
>gi|91777657|ref|YP_552865.1| bipolymer transport protein MotA/TolQ/ExbB family [Burkholderia
xenovorans LB400]
gi|91690317|gb|ABE33515.1| outer membrane transport energization protein ExbB [Burkholderia
xenovorans LB400]
Length = 262
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 98/231 (42%), Gaps = 23/231 (9%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
M +YGLA ++ + +CI+ L I S+LSW+VI+ K + +RR R+ E
Sbjct: 1 MQHYGLA-------NVWESGDIVTRCILGTLLIMSVLSWTVILVKLWTIVRIRRVTRQAE 53
Query: 61 QLFWSGQSLETVCKSLK-------NHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRI 113
FW E KSL + + A+ + + I + D I
Sbjct: 54 AQFWRADRFEDGLKSLGAEASKSVRDNPLLALALAGEEAAAHHRQTQSHLHDRIDVSDWI 113
Query: 114 DR----MMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
R MD AIAR + L+ L S+ S VG+ G V G+ I ++
Sbjct: 114 TRRLQDTMDDAIAR----MQSGLAVLASIGSTAPFVGLFGTVWGIYHALILIGETGQTSI 169
Query: 170 VSIPGII-ESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
+ G + ESLI GL V+IP+ + YN +K +++ FA+ A
Sbjct: 170 DHVAGPVGESLIMTAFGLFVAIPAVLGYNGLTRANKSVVTRLKRFAHGLHA 220
>gi|70733350|ref|YP_263125.1| TonB system transport protein ExbB [Pseudomonas fluorescens Pf-5]
gi|68347649|gb|AAY95255.1| TonB system transport protein ExbB [Pseudomonas fluorescens Pf-5]
Length = 334
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 104/224 (46%), Gaps = 5/224 (2%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N G+A D+S + ++ + VK ++ L I SI++W++ I K + +R+ R
Sbjct: 97 NTLGMA-HDLSPWGMYQNADIIVKLVMIGLAIASIITWTIWIAKGFELMGAKRRLRSEIA 155
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
+L+ + + + A+ E + S + +R GI++R+ ++ +
Sbjct: 156 ALKKATTLKEASATATKEGTLA-NLLVHDALEEMRLSAN--SREKEGIKERVSFRLERLV 212
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLI 180
A ++ L ++ S VG+ G V G+M F IA + N+ V PGI E+L+
Sbjct: 213 AACGRNMSSGTGVLATIGSTAPFVGLFGTVWGIMNSFIGIAKTQTTNLAVVAPGIAEALL 272
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+ LGL +IP+ + YN F + Q+ + E ++SR
Sbjct: 273 ATALGLVAAIPAVVIYNVFARSITGYKAQVTDASAEVLLLVSRD 316
>gi|327395240|dbj|BAK12662.1| biopolymer transport ExbB protein [Pantoea ananatis AJ13355]
Length = 241
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 104/224 (46%), Gaps = 5/224 (2%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S++ ++ + VK ++ L + S+++W++ K +R+ + + ++L
Sbjct: 4 DLSVWGMYQHADIVVKVVMIGLLLASVVTWAIFFGKYAELSAAKRRLKREQLALGEARNL 63
Query: 70 ETVCKSLKNHHNIGLAAIFMS-AMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
++ + +A+ ++ A +E + S G GI++R ++ +A
Sbjct: 64 NDAARAAQQFKTASHSAVLLNDAQNELELSA--GVEDTAGIKERTAFRLERRVAAFCRHA 121
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
FL ++ S VG+ G V G+M F IA + N+ V PGI E+L++ +GL
Sbjct: 122 GRGNGFLATIGSVAPFVGLFGTVWGIMNSFIGIAKTQTTNLAVVAPGIAEALLATAIGLV 181
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE-GNIS 230
+IP+ + YN F + + A + + SR + GN++
Sbjct: 182 AAIPAVVIYNVFARMIANYKASLGDVAAQIMLLQSRDIDLGNLA 225
>gi|239906027|ref|YP_002952766.1| putative protein TolQ [Desulfovibrio magneticus RS-1]
gi|239795891|dbj|BAH74880.1| putative protein TolQ [Desulfovibrio magneticus RS-1]
Length = 255
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 112/224 (50%), Gaps = 23/224 (10%)
Query: 16 LFMQMGLAVKCIITLLFIFSILS---WSVIIQKSVNFITL----RRQFREFEQLFWSGQS 68
L+ M A +I +L + + +S WS+I V F TL R R++E+ F +
Sbjct: 10 LWAMMASATPTVIFVLCVLAFMSLGCWSIIF---VKFFTLTAAKRDTARDYER-FQEADT 65
Query: 69 LETVCKSL-KNHHNIGLAAIFMSAMS------EWKKSCDKGARSPIGIQDRIDRMMDVAI 121
L ++L ++ H+ A F+ M+ + D + + + D I R++ +
Sbjct: 66 LRAAMQALGQSRHS---PAFFVGRMAFEELVRMEQADLDPAEKGHVAM-DNIRRVLRQGV 121
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLI 180
+ EL ++++ L+FL + ++A +G+ G V G+M F SI S + ++ PGI E+L+
Sbjct: 122 SMELAKLSKNLAFLATTANATPFIGLFGTVWGIMNSFHSIGLQQSAALAAVAPGISEALV 181
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+ +GL V+IP+ +AYN ++ ++ FA F + R+
Sbjct: 182 ATAIGLAVAIPAVLAYNYYLGFVTSIENELVNFAGAFLNRIQRE 225
>gi|306844657|ref|ZP_07477242.1| tonB-system energizer ExbB [Brucella sp. BO1]
gi|306274829|gb|EFM56599.1| tonB-system energizer ExbB [Brucella sp. BO1]
Length = 307
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 94/192 (48%), Gaps = 3/192 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S + +FM VK ++ L I S+ +W+V + KS+ RR+ + ++ +L
Sbjct: 75 DLSPWGMFMAADWVVKAVMIGLAIASLATWTVWVAKSLELAGARRRANKALKIIGHSATL 134
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSP-IGIQDRIDRMMDVAIARELEEI 128
+L G AA +A E + S AR+ G+++R+ + A+ +
Sbjct: 135 NDAVHALDGMKGPG-AAFVRAAEDEVRLSGPALARAGGEGLKERVASRLSRIEAKAGRRL 193
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
+ L ++ S VG+ G V G+M F +I+ + N+ V PGI E+L++ +GL
Sbjct: 194 AKGTGILATIGSVAPFVGLFGTVWGIMNSFINISEAQTTNLAVVAPGIAEALLATAIGLV 253
Query: 188 VSIPSSIAYNKF 199
+IP+ + YN F
Sbjct: 254 AAIPAVVIYNVF 265
>gi|90418655|ref|ZP_01226566.1| biopolymer transport protein exbB [Aurantimonas manganoxydans
SI85-9A1]
gi|90336735|gb|EAS50440.1| biopolymer transport protein exbB [Aurantimonas manganoxydans
SI85-9A1]
Length = 289
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 92/191 (48%), Gaps = 4/191 (2%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S +FM VK ++ L S+++W++ + K++ +R+ R + ++L
Sbjct: 59 DLSPMGMFMAADWVVKAVMIGLAFASLVTWTIGLSKAMELALAKRRARVGVRRLARAETL 118
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+ + +AA+ SA +E +S D S GI++R+ + A I+
Sbjct: 119 TEALTANRRRWRGPVAALAQSAEAERARSADL---SDDGIKERVSVALSRIEAGAGRSIS 175
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCV 188
L ++ S VG+ G V G+M F I+ + N+ V PGI E+L++ +GL
Sbjct: 176 RGTGILATIGSTAPFVGLFGTVWGIMNAFIGISQANTTNLAVVAPGIAEALLATAIGLVA 235
Query: 189 SIPSSIAYNKF 199
+IP+ I YN F
Sbjct: 236 AIPAVIVYNVF 246
>gi|291618890|ref|YP_003521632.1| ExbB [Pantoea ananatis LMG 20103]
gi|291153920|gb|ADD78504.1| ExbB [Pantoea ananatis LMG 20103]
Length = 247
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 104/224 (46%), Gaps = 5/224 (2%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S++ ++ + VK ++ L + S+++W++ K +R+ + + ++L
Sbjct: 10 DLSVWGMYQHADIVVKVVMIGLLLASVVTWAIFFGKYAELSAAKRRLKREQLALGEARNL 69
Query: 70 ETVCKSLKNHHNIGLAAIFMS-AMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
++ + +A+ ++ A +E + S G GI++R ++ +A
Sbjct: 70 NDAARAAQQFKTASHSAVLLNDAQNELELSA--GVEDTAGIKERTAFRLERRVAAFCRHA 127
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
FL ++ S VG+ G V G+M F IA + N+ V PGI E+L++ +GL
Sbjct: 128 GRGNGFLATIGSVAPFVGLFGTVWGIMNSFIGIAKTQTTNLAVVAPGIAEALLATAIGLV 187
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE-GNIS 230
+IP+ + YN F + + A + + SR + GN++
Sbjct: 188 AAIPAVVIYNVFARMIANYKASLGDVAAQIMLLQSRDIDLGNLA 231
>gi|296113197|ref|YP_003627135.1| MotA/TolQ/ExbB proton channel [Moraxella catarrhalis RH4]
gi|295920891|gb|ADG61242.1| MotA/TolQ/ExbB proton channel [Moraxella catarrhalis RH4]
Length = 229
Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 90/197 (45%), Gaps = 1/197 (0%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
IS+ +L ++ + VK ++ +L + S +SW +I + + FE+ FW+
Sbjct: 5 ISLISLVIEASVVVKLVMAILLLLSTISWVLIFHLGTKIGGIAKFDERFERWFWTDDIDH 64
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
+ GL IF + + + S ++R + +A+ E + +
Sbjct: 65 QLSVVQAESERAGLELIFYTGFYDQNHQDQDSSLSDDKKVQIVERRLRMALGSEQVHLEK 124
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCVS 189
LS L ++ S +G+ G V G+M F + S + ++ P I E+LI+ LGL V+
Sbjct: 125 GLSTLATIGSVSPYIGLFGTVWGIMNAFIGLGQAESVGLATVAPSIAEALIATALGLFVA 184
Query: 190 IPSSIAYNKFIEDSKKF 206
IP+++AYN F S
Sbjct: 185 IPATMAYNHFATKSNTL 201
>gi|197105655|ref|YP_002131032.1| MotA/TolQ/ExbB proton channel family protein [Phenylobacterium
zucineum HLK1]
gi|196479075|gb|ACG78603.1| MotA/TolQ/ExbB proton channel family protein [Phenylobacterium
zucineum HLK1]
Length = 301
Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 102/223 (45%), Gaps = 7/223 (3%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+++ +FM VK I+ L + S+ +W++++ K + F +L R F + F +S+
Sbjct: 76 LNVGTMFMDADPVVKVIMIGLALASVFTWTILLTKILEFRSLNRVTDSFLENFRGAKSIN 135
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL----- 125
+ + + G M+A + + + A I R +M A
Sbjct: 136 DMNRIAMSEEFDGNPLADMAAAAAQEVELSRQAGLSITGDHRETTLMRAQAAVGAVQASL 195
Query: 126 -EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISIL 183
++ + FL S+ S G +G+ G V G+M F IA + N+ V PGI E+L++
Sbjct: 196 GRRLSGGMQFLASVGSNGPFIGLFGTVYGIMNSFIGIANTNTTNLAVVAPGIAEALLATG 255
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
LGL +IPS I YN F + + EGF E +SRQ +
Sbjct: 256 LGLFAAIPSVIFYNYFQTRISAYGARTEGFVAELMNAISRQLD 298
>gi|104784347|ref|YP_610845.1| solvent/drug/ferric siderophore transport protein ExbB [Pseudomonas
entomophila L48]
gi|95113334|emb|CAK18062.1| solvent/drug/ferric siderophore transport protein ExbB [Pseudomonas
entomophila L48]
Length = 320
Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 100/216 (46%), Gaps = 4/216 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S + ++ + VK ++ L + SI++W++ I K + +R+ R SL
Sbjct: 91 DLSPWGMYKNADVVVKAVMIGLALASIITWTIWIAKGFELMGAKRRLRGEIAALKRSVSL 150
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+ + N + A+ E + S + AR GI++R+ ++ +A ++
Sbjct: 151 KE-ASDVSNKEGTLAHTLVHDALEEMRLSAN--AREKEGIKERVSFRLERLVAASGRNMS 207
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCV 188
L ++ S VG+ G V G+M F IA + N+ V PGI E+L++ LGL
Sbjct: 208 SGTGVLATIGSTAPFVGLFGTVWGIMNSFIGIAKTQTTNLAVVAPGIAEALLATALGLVA 267
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+IP+ + YN F + Q+ + + ++SR
Sbjct: 268 AIPAVVIYNVFARSIAGYKAQVSDASAQVLLLVSRD 303
>gi|293608231|ref|ZP_06690534.1| ExbB protein [Acinetobacter sp. SH024]
gi|292828804|gb|EFF87166.1| ExbB protein [Acinetobacter sp. SH024]
Length = 292
Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 108/232 (46%), Gaps = 33/232 (14%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YGL AL+ + L K + +L + SI +W +II K + ++RQ +E E+
Sbjct: 66 NPYGLE-------ALWREGDLVAKSTLFILVLMSIGTWYIIISKLLQQGKVKRQGKEAEK 118
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPI----GIQDRID--R 115
FW SL+ + L+ S ++ +KG S + +RID
Sbjct: 119 HFWEATSLDNAAEGLEQS-------------SAYRFIAEKGINSTKSHGGSLLERIDFNT 165
Query: 116 MMDVAIARELEEITEK----LSFLGSMSSAGLLVGILGAVLGMMGFFQS--IAGYYSNNV 169
+ ++I R +E+I L+FL ++ S VG+ G V G+ + I+G S +
Sbjct: 166 WVSISIQRAIEKIQNHLGGGLAFLATVGSTAPFVGLFGTVWGIYHALTAIGISGQASIDK 225
Query: 170 VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
V+ P + E+LI +GL V++P+ + YN +K + F ++ A+L
Sbjct: 226 VAGP-VGEALIMTAIGLAVAVPAVLGYNWLTRRNKAVMENVRSFGSDLHAVL 276
>gi|46201556|ref|ZP_00054804.2| COG0811: Biopolymer transport proteins [Magnetospirillum
magnetotacticum MS-1]
Length = 235
Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 101/215 (46%), Gaps = 6/215 (2%)
Query: 14 FALFMQMGLAVKCIITLLFIF-SILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
A F + G V + ++ F S+ SWSVI + V I + R + FWS +LE
Sbjct: 12 LAHFWEQGDIVSHTVAIILAFLSVASWSVIALRFVAQIRVNRSVDGALETFWSAPTLEEA 71
Query: 73 CKSL--KNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ + +++ I GLA I + A + ++G S + + + R M + R +
Sbjct: 72 VERMTRRDYSGILAGLARIGVEAARIHAQHEERGIGSGVSSSEFLTRAMRNYMVRSQARL 131
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLC 187
L+FL S+ S +G+ G V G+ ++G + + G + E+L+ GL
Sbjct: 132 ESGLTFLASVGSTAPFIGLFGTVWGIFHALVGLSGATQVVLDKVAGPVGEALVMTAAGLF 191
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
V+IP+ +AYN ++ ++GFA++ A L+
Sbjct: 192 VAIPAVLAYNALNRANRLIGAYLDGFAHDLHAFLT 226
>gi|325122037|gb|ADY81560.1| putative biopolymer transport protein ExbB [Acinetobacter
calcoaceticus PHEA-2]
Length = 293
Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 108/232 (46%), Gaps = 33/232 (14%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YGL AL+ + L K + +L + SI +W +II K + ++RQ +E E+
Sbjct: 67 NPYGLE-------ALWREGDLVAKSTLFILVLMSIGTWYIIISKLLQQGKVKRQGKEAEK 119
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPI----GIQDRID--R 115
FW SL+ + L+ S ++ +KG S + +RID
Sbjct: 120 HFWEATSLDNAAEGLEQS-------------SAYRFIAEKGINSTKSHGGSLLERIDFNT 166
Query: 116 MMDVAIARELEEITEK----LSFLGSMSSAGLLVGILGAVLGMMGFFQS--IAGYYSNNV 169
+ ++I R +E+I L+FL ++ S VG+ G V G+ + I+G S +
Sbjct: 167 WVSISIQRAIEKIQNHLGGGLAFLATVGSTAPFVGLFGTVWGIYHALTAIGISGQASIDK 226
Query: 170 VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
V+ P + E+LI +GL V++P+ + YN +K + F ++ A+L
Sbjct: 227 VAGP-VGEALIMTAIGLAVAVPAVLGYNWLTRRNKAVMENVRSFGSDLHAVL 277
>gi|170739188|ref|YP_001767843.1| MotA/TolQ/ExbB proton channel [Methylobacterium sp. 4-46]
gi|168193462|gb|ACA15409.1| MotA/TolQ/ExbB proton channel [Methylobacterium sp. 4-46]
Length = 228
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 102/201 (50%), Gaps = 11/201 (5%)
Query: 7 AIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG 66
A D S LF+Q VK ++ LL + S+ W+VI++K++ RRQ R F ++ +G
Sbjct: 9 AAHDFSFLGLFLQADPIVKGVMILLVLASVACWTVIVEKAIRLAAARRQARAFARMVATG 68
Query: 67 QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
LE G+AA ++A E + D ++RI+R M A+A +L+
Sbjct: 69 GPLEA---------GRGIAARVVAAAQEAWRDQDPSETR-AERRERIERAMRAALALDLK 118
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLG 185
+ L L + SA VG+ G V G+M F SIA ++ V PGI E+L + +G
Sbjct: 119 RLQVGLPLLATSGSAAPFVGLFGTVWGIMNSFASIAKSQDTSLAVVAPGIAEALFATAIG 178
Query: 186 LCVSIPSSIAYNKFIEDSKKF 206
L V+IP+ +AYNK D K
Sbjct: 179 LVVAIPAVVAYNKLSGDLAKL 199
>gi|53802322|ref|YP_112972.1| MotA/TolQ/ExbB proton channel family protein [Methylococcus
capsulatus str. Bath]
gi|53756083|gb|AAU90374.1| MotA/TolQ/ExbB proton channel family protein [Methylococcus
capsulatus str. Bath]
Length = 218
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 103/212 (48%), Gaps = 12/212 (5%)
Query: 22 LAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHN 81
L + + +L FS+L+W+VI+ K + R FE+ FWS SL+ +
Sbjct: 8 LIINVTLWVLISFSVLTWTVILLKGGQYWRHAVGNRLFEEKFWSAASLDEARLRMDEAGG 67
Query: 82 IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRID--RMMDVAIARELEEITE----KLSFL 135
L + + + GA S ++ R D ++ + R+LE + L+ L
Sbjct: 68 CPLYRLASAGFQVFDSGNGNGAAS---LKHRGDLVATLERKLKRQLERESRLSDIGLTVL 124
Query: 136 GSMSSAGLLVGILGAVLGMMGFFQSIA--GYYSNNVVSIPGIIESLISILLGLCVSIPSS 193
S+ S VG+ G V G+M Q I+ G S VV+ P I E+LI+ +G+ V++P+
Sbjct: 125 ASIGSTAPFVGLFGTVWGIMHALQDISRSGKASLEVVAGP-IGEALIATAIGIAVAVPAV 183
Query: 194 IAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+AYN + S++ +E FA +F +++ +T
Sbjct: 184 LAYNFLMRRSRRKQQALEIFAEDFLHLVAAET 215
>gi|307823127|ref|ZP_07653357.1| MotA/TolQ/ExbB proton channel [Methylobacter tundripaludum SV96]
gi|307735902|gb|EFO06749.1| MotA/TolQ/ExbB proton channel [Methylobacter tundripaludum SV96]
Length = 288
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 100/208 (48%), Gaps = 21/208 (10%)
Query: 22 LAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNH-- 79
L V + +L FS+++W++I+ K + + + + R + + FW Q + N
Sbjct: 42 LIVDATLWILIGFSVVTWALILIKGIQHLRISQHNRSYGKKFWGAQDFQAAAALEGNKGP 101
Query: 80 ----HNIGLAAIFM----SAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEK 131
+IG + + + + + D+ Q+ +DR + + +E +
Sbjct: 102 AARVADIGFTTLIEADGGTTTHDLEHTGDR--------QELLDRRLRQQMQKERGALESG 153
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGLCVS 189
L+ L ++ S VG+ G V G+MG SI +G S +VV+ P I E+LI+ +G+ V+
Sbjct: 154 LAILATIGSISPFVGLFGTVWGIMGALTSISKSGSASLDVVAGP-IGEALIATAVGIAVA 212
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFANEF 217
+P+ I YN FI +K ++ FA +F
Sbjct: 213 VPAVIGYNFFIRRNKVIWAFLDDFAIDF 240
>gi|152981614|ref|YP_001352054.1| biopolymer transport protein ExbB [Janthinobacterium sp. Marseille]
gi|151281691|gb|ABR90101.1| biopolymer transport protein ExbB [Janthinobacterium sp. Marseille]
Length = 242
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 100/227 (44%), Gaps = 10/227 (4%)
Query: 9 MDISIF---ALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS 65
M++S + +L+ Q K + LL SI SW VI K++ + RR R FW
Sbjct: 1 MEVSPYGLESLWSQGDFVTKGVAVLLVAMSIASWYVIATKALQLMQYRRAARAAGHEFWD 60
Query: 66 GQSLETVCKSLKNHHNIG-LAAIFMSAMSEWKKSCDKGA-RSPIGIQDRIDRMMDVAIAR 123
SL +L N + +A ++AM KG + + D I + AI
Sbjct: 61 ATSLTEGTATLGNGNPFADIAEAGVTAMRH--HEAHKGHLHDQLSVSDWITLSLRQAIDE 118
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLIS 181
++ ++ L S+ S VG+ G V G+ +I +G S + V+ P + E+LI
Sbjct: 119 TSAKLQSGMAVLASVGSTAPFVGLFGTVWGIYHALVAIGTSGQASIDKVAGP-VGEALIM 177
Query: 182 ILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
LGL V+IP++ YN + +K +M F + A+ + N
Sbjct: 178 TALGLAVAIPATFGYNALVRGNKSVIAKMNKFGFDLHALFVTGSRAN 224
>gi|306841382|ref|ZP_07474085.1| tonB-system energizer ExbB [Brucella sp. BO2]
gi|306288567|gb|EFM59916.1| tonB-system energizer ExbB [Brucella sp. BO2]
Length = 329
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 94/192 (48%), Gaps = 3/192 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S + +FM VK ++ L I S+ +W+V + KS+ RR+ + ++ +L
Sbjct: 97 DLSPWGMFMAADWVVKAVMIGLAIASLATWTVWVAKSLELAGARRRANKALKVIGHSATL 156
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSP-IGIQDRIDRMMDVAIARELEEI 128
+L G AA +A E + S AR+ G+++R+ + A+ +
Sbjct: 157 NDAVHALDGMKGPG-AAFVRAAEDEVRLSGPALARAGGEGLKERVASRLSRIEAKAGRRL 215
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
+ L ++ S VG+ G V G+M F +I+ + N+ V PGI E+L++ +GL
Sbjct: 216 AKGTGILATIGSVAPFVGLFGTVWGIMNSFINISEAQTTNLAVVAPGIAEALLATAIGLV 275
Query: 188 VSIPSSIAYNKF 199
+IP+ + YN F
Sbjct: 276 AAIPAVVIYNVF 287
>gi|94311216|ref|YP_584426.1| MotA/TolQ/ExbB proton channel [Cupriavidus metallidurans CH34]
gi|93355068|gb|ABF09157.1| biopolymer transport exbB protein MotA/TolQ/ExbB proton channel
[Cupriavidus metallidurans CH34]
Length = 243
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 99/218 (45%), Gaps = 9/218 (4%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
+ D+ + L+ Q ++ +L I S+LSW VI+ K+ + I L++ E+ FW
Sbjct: 1 MQDLGLSHLWSQGDFVMRATAIILLIMSLLSWIVILTKAWDLIRLKKMAHGAEKRFWHSD 60
Query: 68 SLETVCKSL--KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
+ +L + + + A+ ++ ++ + I D + R + AI +
Sbjct: 61 DFDHALDTLGANDANPFRMLAVTGREAAQHHRASQPQLHDALDISDWLTRSLKSAIDEAV 120
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII----ESLIS 181
+ L+ L S+ S VG+ G V G+ + ++ G ++ V +I + E+LI
Sbjct: 121 ARMQSGLAILASVGSTAPFVGLFGTVWGI---YHALIGIGASGVPTIDKVAGPVGEALIM 177
Query: 182 ILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
GL V+IP+ + YN +K ++ FA++ A
Sbjct: 178 TAFGLAVAIPAVLGYNALSRGNKGVISKLNRFAHDLHA 215
>gi|171318263|ref|ZP_02907424.1| MotA/TolQ/ExbB proton channel [Burkholderia ambifaria MEX-5]
gi|171096527|gb|EDT41423.1| MotA/TolQ/ExbB proton channel [Burkholderia ambifaria MEX-5]
Length = 238
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 95/198 (47%), Gaps = 6/198 (3%)
Query: 24 VKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIG 83
V+ + LL +FS+++W++I+ K++ + + R FW+ S + +G
Sbjct: 10 VQGALWLLVVFSVVTWTLIVVKAIQSLRSSARNRHCVSAFWAANSFHDAAALDGANSPVG 69
Query: 84 -LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI--ARELEEITEKLSFLGSMSS 140
LAA A+ +S D ++R + I AR EE L+ L S+ S
Sbjct: 70 ELAATGFDALRRADESSAHDLEHSWSRHDLLERHLRQQIHNARRREE--AGLAVLASIGS 127
Query: 141 AGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCVSIPSSIAYNKF 199
VG+ G V G++ +I S ++ + G I E+L++ +G+ V++P+ +AYN F
Sbjct: 128 TAPFVGLFGTVFGIIHALTAITHSASASIDVVAGPIGEALVATGIGIAVAVPAVLAYNFF 187
Query: 200 IEDSKKFAMQMEGFANEF 217
+ K + ++ FA +F
Sbjct: 188 VRRVKAASADLDAFATDF 205
>gi|149927605|ref|ZP_01915858.1| MotA/TolQ/ExbB proton channel [Limnobacter sp. MED105]
gi|149823659|gb|EDM82887.1| MotA/TolQ/ExbB proton channel [Limnobacter sp. MED105]
Length = 239
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 98/226 (43%), Gaps = 21/226 (9%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YG+A A++ Q +K + LL I SI SW VII +S+ LR+ ++
Sbjct: 4 NPYGIA-------AMWAQGDWVIKSVALLLLIMSIASWYVIITRSIRLYRLRKNVGAVDK 56
Query: 62 LFWSGQS----LETVCKSLKN--HHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDR 115
FW S L+ + K N HH AI A + I + D +
Sbjct: 57 -FWHTHSFAEGLQVLGKDTGNPFHH----MAIEGQAAVNHHSTNKDDLHGQISLADWLSE 111
Query: 116 MMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIP 173
+ A+ E++ LS L S+ S VG+ G V G+ I +G S + V+ P
Sbjct: 112 ALRGAMDEAAEKLQSGLSILASVGSTAPFVGLFGTVWGIYHALVGIGVSGQASIDKVAGP 171
Query: 174 GIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
+ E+LI GL V+IP+ + YN +K ++ FA + A
Sbjct: 172 -VGEALIMTAFGLAVAIPAVLGYNALTRANKGLLSKLNRFARQLHA 216
>gi|149923452|ref|ZP_01911856.1| MotA/TolQ/ExbB proton channel [Plesiocystis pacifica SIR-1]
gi|149815704|gb|EDM75231.1| MotA/TolQ/ExbB proton channel [Plesiocystis pacifica SIR-1]
Length = 231
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 101/212 (47%), Gaps = 10/212 (4%)
Query: 21 GLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHH 80
G+ + +I LL + ++ + VI+ K + + Q F FW + L+ + + +
Sbjct: 20 GIVLAVVIVLLALVALCIF-VILYKLIQVSQAQSQSVTFLDRFWESKRLDDIYRVAEGLK 78
Query: 81 NIGLAAIFMSAMSEWKKSCDKGARSPIGIQDR------IDRMMDVAIARELEEITEKLSF 134
LAA+F + E K + A + DR I+R + A EL ++ L F
Sbjct: 79 ASPLAAMFRAGYVELSKIKKRSAEGGESMHDRMEDTANIERALQRARVSELTKLETLLPF 138
Query: 135 LGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGLCVSIPS 192
L + +A +G+ G V G+M F +I AG + +S P I E+L++ L L ++P+
Sbjct: 139 LATTGAAAPFIGLFGTVWGIMDAFLAIAAAGEAELSEISQP-IAEALVTTALALLSAVPA 197
Query: 193 SIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+A+N F K + +M+ F N++ I+ R
Sbjct: 198 VVAFNYFNRRLKVLSAEMQTFGNDYLNIIRRH 229
>gi|50119317|ref|YP_048484.1| biopolymer transport protein [Pectobacterium atrosepticum SCRI1043]
gi|49609843|emb|CAG73277.1| biopolymer transport protein [Pectobacterium atrosepticum SCRI1043]
Length = 304
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 96/194 (49%), Gaps = 8/194 (4%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQF-REFEQLFWSGQS 68
D+S++ ++ VK ++ L + S+++W++ KSV +R+ RE+ L +
Sbjct: 69 DLSVWGMYQHADAVVKTVMIGLLLASVITWAIFFSKSVEMSGAKRRLRREYLAL----EQ 124
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPI--GIQDRIDRMMDVAIARELE 126
+T+ +L+ ++ +++ + D ARS GI++R ++ +A
Sbjct: 125 AKTLDDALETADAFKTGSVAQQLLADAQNELDLSARSDDNNGIKERTAFRLERRVAATGR 184
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLG 185
+ +L ++ + VG+ G V G+M F IA + N+ V PGI E+L++ +G
Sbjct: 185 HMGRGNGYLATVGAVAPFVGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGIAEALLATAIG 244
Query: 186 LCVSIPSSIAYNKF 199
L +IP+ + YN F
Sbjct: 245 LVAAIPAVVIYNVF 258
>gi|301347557|ref|ZP_07228298.1| biopolymer transport protein [Acinetobacter baumannii AB056]
gi|301513106|ref|ZP_07238343.1| biopolymer transport protein [Acinetobacter baumannii AB058]
gi|301597536|ref|ZP_07242544.1| biopolymer transport protein [Acinetobacter baumannii AB059]
Length = 292
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 108/232 (46%), Gaps = 33/232 (14%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YGL AL+ + L K + +L + SI +W +II K + ++RQ +E E+
Sbjct: 66 NPYGLE-------ALWREGDLVAKSTLFILVLMSIGTWYIIISKLLQQGKVKRQGKEAEK 118
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPI----GIQDRID--R 115
FW SL+ + L+ S ++ +KG S + +RID
Sbjct: 119 HFWEATSLDNAAEGLEQS-------------SAYRFIAEKGINSTKSHGGSLLERIDFNT 165
Query: 116 MMDVAIARELEEITEK----LSFLGSMSSAGLLVGILGAVLGMMGFFQS--IAGYYSNNV 169
+ ++I R +E++ L+FL ++ S VG+ G V G+ + I+G S +
Sbjct: 166 WVSISIQRAIEKVQNHLGGGLAFLATVGSTAPFVGLFGTVWGIYHALTAIGISGQASIDK 225
Query: 170 VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
V+ P + E+LI +GL V++P+ + YN +K + F ++ A+L
Sbjct: 226 VAGP-VGEALIMTAIGLAVAVPAVLGYNWLTRRNKAVMENVRSFGSDLHAVL 276
>gi|193077254|gb|ABO12032.2| biopolymer transport protein [Acinetobacter baumannii ATCC 17978]
Length = 292
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 108/232 (46%), Gaps = 33/232 (14%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YGL AL+ + L K + +L + SI +W +II K + ++RQ +E E+
Sbjct: 66 NPYGLE-------ALWREGDLVAKSTLFILVLMSIGTWYIIISKLLQQGKVKRQGKEAEK 118
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPI----GIQDRID--R 115
FW SL+ + L+ S ++ +KG S + +RID
Sbjct: 119 HFWEATSLDNAAEGLEQS-------------SAYRFIAEKGINSTKSHGGSLLERIDFNT 165
Query: 116 MMDVAIARELEEITEK----LSFLGSMSSAGLLVGILGAVLGMMGFFQS--IAGYYSNNV 169
+ ++I R +E++ L+FL ++ S VG+ G V G+ + I+G S +
Sbjct: 166 WVSISIQRAIEKVQNHLGGGLAFLATVGSTAPFVGLFGTVWGIYHALTAIGISGQASIDK 225
Query: 170 VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
V+ P + E+LI +GL V++P+ + YN +K + F ++ A+L
Sbjct: 226 VAGP-VGEALIMTAIGLAVAVPAVLGYNWLTRRNKAVMENVRSFGSDLHAVL 276
>gi|169796121|ref|YP_001713914.1| putative transporter; putative MotA/TolQ/ExbB proton channel
[Acinetobacter baumannii AYE]
gi|213157146|ref|YP_002319191.1| biopolymer transport protein [Acinetobacter baumannii AB0057]
gi|215483575|ref|YP_002325796.1| MotA/TolQ/ExbB proton channel family protein [Acinetobacter
baumannii AB307-0294]
gi|169149048|emb|CAM86925.1| putative transporter; putative MotA/TolQ/ExbB proton channel
[Acinetobacter baumannii AYE]
gi|213056306|gb|ACJ41208.1| biopolymer transport protein [Acinetobacter baumannii AB0057]
gi|213988205|gb|ACJ58504.1| MotA/TolQ/ExbB proton channel family protein [Acinetobacter
baumannii AB307-0294]
Length = 293
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 108/232 (46%), Gaps = 33/232 (14%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YGL AL+ + L K + +L + SI +W +II K + ++RQ +E E+
Sbjct: 67 NPYGLE-------ALWREGDLVAKSTLFILVLMSIGTWYIIISKLLQQGKVKRQGKEAEK 119
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPI----GIQDRID--R 115
FW SL+ + L+ S ++ +KG S + +RID
Sbjct: 120 HFWEATSLDNAAEGLEQS-------------SAYRFIAEKGINSTKSHGGSLLERIDFNT 166
Query: 116 MMDVAIARELEEITEK----LSFLGSMSSAGLLVGILGAVLGMMGFFQS--IAGYYSNNV 169
+ ++I R +E++ L+FL ++ S VG+ G V G+ + I+G S +
Sbjct: 167 WVSISIQRAIEKVQNHLGGGLAFLATVGSTAPFVGLFGTVWGIYHALTAIGISGQASIDK 226
Query: 170 VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
V+ P + E+LI +GL V++P+ + YN +K + F ++ A+L
Sbjct: 227 VAGP-VGEALIMTAIGLAVAVPAVLGYNWLTRRNKAVMENVRSFGSDLHAVL 277
>gi|261750827|ref|ZP_05994536.1| biopolymer transporter ExbB [Brucella suis bv. 5 str. 513]
gi|261740580|gb|EEY28506.1| biopolymer transporter ExbB [Brucella suis bv. 5 str. 513]
Length = 319
Score = 72.4 bits (176), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 93/192 (48%), Gaps = 3/192 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S + +FM VK ++ L I S+ +W+V + KS+ RR+ + ++ +L
Sbjct: 87 DLSPWGMFMAADWVVKAVMIGLAIASLATWTVWVAKSLELAGARRRANKALKIIGHSATL 146
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSP-IGIQDRIDRMMDVAIARELEEI 128
+L G AA +A E + S AR+ G ++R+ + A+ +
Sbjct: 147 NDAVHALDGAKGPG-AAFVRAAEDEVRLSGPALARAGGEGFKERVASRLSRIEAKAGRRL 205
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
+ L ++ S VG+ G V G+M F +I+ + N+ V PGI E+L++ +GL
Sbjct: 206 AKGTGILATIGSVAPFVGLFGTVWGIMNSFINISEAQTTNLAVVAPGIAEALLATAIGLV 265
Query: 188 VSIPSSIAYNKF 199
+IP+ + YN F
Sbjct: 266 AAIPAVVIYNVF 277
>gi|169633460|ref|YP_001707196.1| putative transporter; MotA/TolQ/ExbB proton channel [Acinetobacter
baumannii SDF]
gi|169152252|emb|CAP01157.1| putative transporter; MotA/TolQ/ExbB proton channel [Acinetobacter
baumannii]
Length = 293
Score = 72.4 bits (176), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 108/232 (46%), Gaps = 33/232 (14%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YGL AL+ + L K + +L + SI +W +II K + ++RQ +E E+
Sbjct: 67 NPYGLE-------ALWREGDLVAKSTLFILVLMSIGTWYIIISKLLQQGKVKRQGKEAEK 119
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPI----GIQDRID--R 115
FW SL+ + L+ S ++ +KG S + +RID
Sbjct: 120 HFWEATSLDNAAEGLEQS-------------SAYRFIAEKGINSTKSHGGSLLERIDFNT 166
Query: 116 MMDVAIARELEEITEK----LSFLGSMSSAGLLVGILGAVLGMMGFFQS--IAGYYSNNV 169
+ ++I R +E++ L+FL ++ S VG+ G V G+ + I+G S +
Sbjct: 167 WVSISIQRAIEKVQSHLGGGLAFLATVGSTAPFVGLFGTVWGIYHALTAIGISGQASIDK 226
Query: 170 VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
V+ P + E+LI +GL V++P+ + YN +K + F ++ A+L
Sbjct: 227 VAGP-VGEALIMTAIGLAVAVPAVLGYNWLTRRNKAVMENVRSFGSDLHAVL 277
>gi|330812607|ref|YP_004357069.1| transporter [Pseudomonas brassicacearum subsp. brassicacearum
NFM421]
gi|327380715|gb|AEA72065.1| putative transporter [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
Length = 323
Score = 72.4 bits (176), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 109/227 (48%), Gaps = 11/227 (4%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFR-EFE 60
N+ G+A D+S + ++ + VK ++ L I SI++W++ I K + +R+ R E
Sbjct: 86 NSLGMA-HDLSPWGMYKNADIIVKIVMIGLAIASIITWTIWIAKGFELLGAKRRLRGEIA 144
Query: 61 QLFWSGQSLETVCKSLKNHHNIGLAA--IFMSAMSEWKKSCDKGARSPIGIQDRIDRMMD 118
L + T+ ++ G A + A+ E + S + +R GI++R+ ++
Sbjct: 145 AL----KKATTLKEASATAAKAGTLANLLVHDALEEMRLSAN--SREKEGIKERVSFRLE 198
Query: 119 VAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIE 177
+A ++ L ++ S VG+ G V G+M F IA + N+ V PGI E
Sbjct: 199 RLVAACGRNMSSGTGVLATIGSTAPFVGLFGTVWGIMNSFIGIAKTQTTNLAVVAPGIAE 258
Query: 178 SLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+L++ LGL +IP+ + YN F + Q+ + E ++SR
Sbjct: 259 ALLATALGLVAAIPAVVIYNVFARSIAGYKAQVSDASAEVLLLVSRD 305
>gi|254700331|ref|ZP_05162159.1| tonB-system energizer ExbB [Brucella suis bv. 5 str. 513]
Length = 307
Score = 72.4 bits (176), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 93/192 (48%), Gaps = 3/192 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S + +FM VK ++ L I S+ +W+V + KS+ RR+ + ++ +L
Sbjct: 75 DLSPWGMFMAADWVVKAVMIGLAIASLATWTVWVAKSLELAGARRRANKALKIIGHSATL 134
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSP-IGIQDRIDRMMDVAIARELEEI 128
+L G AA +A E + S AR+ G ++R+ + A+ +
Sbjct: 135 NDAVHALDGAKGPG-AAFVRAAEDEVRLSGPALARAGGEGFKERVASRLSRIEAKAGRRL 193
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
+ L ++ S VG+ G V G+M F +I+ + N+ V PGI E+L++ +GL
Sbjct: 194 AKGTGILATIGSVAPFVGLFGTVWGIMNSFINISEAQTTNLAVVAPGIAEALLATAIGLV 253
Query: 188 VSIPSSIAYNKF 199
+IP+ + YN F
Sbjct: 254 AAIPAVVIYNVF 265
>gi|237808556|ref|YP_002892996.1| MotA/TolQ/ExbB proton channel [Tolumonas auensis DSM 9187]
gi|237500817|gb|ACQ93410.1| MotA/TolQ/ExbB proton channel [Tolumonas auensis DSM 9187]
Length = 253
Score = 72.4 bits (176), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 110/220 (50%), Gaps = 19/220 (8%)
Query: 19 QMGLAVKCIIT---------LLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
QMGLA T LL + S+ +W I+ K LRR + F FWS ++L
Sbjct: 9 QMGLAHVLTQTSGMGLIPAVLLLLMSVATWYWIVLKVYQSWKLRRNTKAFLAAFWSCRNL 68
Query: 70 ETVCKS-LKNHHNIGLAAIFMSAMSEWKK--SCDKGARSPIGIQDRIDRMMDVAIARELE 126
+ V + LK A + +S + ++ + D+G ++ + R + ++ R
Sbjct: 69 KQVEEQVLKQVKPEPCAELMISGLQAARQVQNPDQGLVEMGSREEFVLRALRRSVTRSTL 128
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLG----MMGFFQSIAGYYSNNVVSIPGIIESLISI 182
+ L+ L S+ SA VG+ G V G ++G S++G + + V+ P + E+LI
Sbjct: 129 RLEAGLTLLASVGSAAPFVGLFGTVWGIYNALIGI--SVSGQSTLDKVAGP-VGEALIMT 185
Query: 183 LLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
GL V++P+ +AYN F+ ++ + +++GFA++ A+LS
Sbjct: 186 AFGLAVALPAVLAYNAFVRMNRVYLAELDGFAHDVFALLS 225
>gi|260555170|ref|ZP_05827391.1| TolQ [Acinetobacter baumannii ATCC 19606]
gi|260411712|gb|EEX05009.1| TolQ [Acinetobacter baumannii ATCC 19606]
gi|322508270|gb|ADX03724.1| MotA/TolQ/ExbB proton channel [Acinetobacter baumannii 1656-2]
gi|323517896|gb|ADX92277.1| biopolymer transport protein [Acinetobacter baumannii TCDC-AB0715]
Length = 293
Score = 72.4 bits (176), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 108/232 (46%), Gaps = 33/232 (14%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YGL AL+ + L K + +L + SI +W +II K + ++RQ +E E+
Sbjct: 67 NPYGLE-------ALWREGDLVAKSTLFILVLMSIGTWYIIISKLLQQGKVKRQGKEAEK 119
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPI----GIQDRID--R 115
FW SL+ + L+ S ++ +KG S + +RID
Sbjct: 120 HFWEATSLDNAAEGLEQS-------------SAYRFIAEKGINSTKSHGGSLLERIDFNT 166
Query: 116 MMDVAIARELEEITEK----LSFLGSMSSAGLLVGILGAVLGMMGFFQS--IAGYYSNNV 169
+ ++I R +E++ L+FL ++ S VG+ G V G+ + I+G S +
Sbjct: 167 WVSISIQRAIEKVQNHLGGGLAFLATVGSTAPFVGLFGTVWGIYHALTAIGISGQASIDK 226
Query: 170 VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
V+ P + E+LI +GL V++P+ + YN +K + F ++ A+L
Sbjct: 227 VAGP-VGEALIMTAIGLAVAVPAVLGYNWLTRRNKAVMENVRSFGSDLHAVL 277
>gi|239502172|ref|ZP_04661482.1| biopolymer transport protein [Acinetobacter baumannii AB900]
Length = 292
Score = 72.4 bits (176), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 108/232 (46%), Gaps = 33/232 (14%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YGL AL+ + L K + +L + SI +W +II K + ++RQ +E E+
Sbjct: 66 NPYGLE-------ALWREGDLVAKSTLFILVLMSIGTWYIIISKLLQQGKVKRQGKEAEK 118
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPI----GIQDRID--R 115
FW SL+ + L+ S ++ +KG S + +RID
Sbjct: 119 HFWEATSLDNAAEGLEQS-------------SAYRFIAEKGINSTKSHGGSLLERIDFNT 165
Query: 116 MMDVAIARELEEITEK----LSFLGSMSSAGLLVGILGAVLGMMGFFQS--IAGYYSNNV 169
+ ++I R +E++ L+FL ++ S VG+ G V G+ + I+G S +
Sbjct: 166 WVSISIQRAIEKVQNHLGGGLAFLATVGSTAPFVGLFGTVWGIYHALTAIGISGQASIDK 225
Query: 170 VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
V+ P + E+LI +GL V++P+ + YN +K + F ++ A+L
Sbjct: 226 VAGP-VGEALIMTAIGLAVAVPAVLGYNWLTRRNKAVMENVRSFGSDLHAVL 276
>gi|238793632|ref|ZP_04637255.1| TonB complex protein [Yersinia intermedia ATCC 29909]
gi|238727047|gb|EEQ18578.1| TonB complex protein [Yersinia intermedia ATCC 29909]
Length = 336
Score = 72.4 bits (176), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 102/197 (51%), Gaps = 5/197 (2%)
Query: 5 GLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFW 64
GLA MD+S++ ++ + VK ++ L + SI++W+++ K RR+ ++ ++
Sbjct: 97 GLA-MDLSVWGMYQHADVVVKGVMIGLVLASIVTWTILFSKGTELFRARRRLQQEYEVIG 155
Query: 65 SGQSLETVCKSLKNHHNIGLAAIFM-SAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAR 123
+ L+T + + ++A+ + A +E S + + GI++R ++ +A
Sbjct: 156 AVTELDTASERAEAFSTDSISALLLREAQNERLLSTESNDNN--GIKERAAFRLERRVAA 213
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISI 182
++ + FL ++ + VG+ G V G+M F IA + N+ V PGI E+L++
Sbjct: 214 IGRQMGKGNGFLATIGAISPFVGLFGTVWGIMNSFIGIAHSQTTNLAVVAPGIAEALLAT 273
Query: 183 LLGLCVSIPSSIAYNKF 199
LGL +IP+ + YN F
Sbjct: 274 ALGLVAAIPAVVIYNIF 290
>gi|184157951|ref|YP_001846290.1| biopolymer transport protein [Acinetobacter baumannii ACICU]
gi|183209545|gb|ACC56943.1| Biopolymer transport protein [Acinetobacter baumannii ACICU]
Length = 292
Score = 72.4 bits (176), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 108/232 (46%), Gaps = 33/232 (14%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YGL AL+ + L K + +L + SI +W +II K + ++RQ +E E+
Sbjct: 66 NPYGLE-------ALWREGDLVAKSTLFILVLMSIGTWYIIISKLLQQGKVKRQGKEAEK 118
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPI----GIQDRID--R 115
FW SL+ + L+ S ++ +KG S + +RID
Sbjct: 119 HFWEATSLDNAAEGLEQS-------------SAYRFIAEKGINSTKSHGGSLLERIDFNT 165
Query: 116 MMDVAIARELEEITEK----LSFLGSMSSAGLLVGILGAVLGMMGFFQS--IAGYYSNNV 169
+ ++I R +E++ L+FL ++ S VG+ G V G+ + I+G S +
Sbjct: 166 WVSISIQRAIEKVQNHLGGGLAFLATVGSTAPFVGLFGTVWGIYHALTAIGISGQASIDK 225
Query: 170 VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
V+ P + E+LI +GL V++P+ + YN +K + F ++ A+L
Sbjct: 226 VAGP-VGEALIMTAIGLAVAVPAVLGYNWLTRRNKAVMENVRSFGSDLHAVL 276
>gi|92119098|ref|YP_578827.1| MotA/TolQ/ExbB proton channel [Nitrobacter hamburgensis X14]
gi|91801992|gb|ABE64367.1| outer membrane transport energization protein ExbB [Nitrobacter
hamburgensis X14]
Length = 366
Score = 72.4 bits (176), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 103/198 (52%), Gaps = 18/198 (9%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLR----RQFREFEQLFWS 65
+++ +FM VK ++ L + S+++WSV + K++ ++ R R R E +
Sbjct: 140 ELTPIGMFMAADYIVKSVMIGLALASVMTWSVWLAKTIELLSARSKLLRDLRSVEGV--- 196
Query: 66 GQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRM---MDVAIA 122
+SLE +L+ + +A + +A E ++S D A + GI++R+ + ++ A A
Sbjct: 197 -RSLEEANNTLQRAGS-DIAILTHAARDEIRRSQD--AMNHDGIKERVASLFSRIEAAAA 252
Query: 123 RELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLIS 181
R + T S L ++ S VG+ G V G+M F I+ + N+ V PGI E+L++
Sbjct: 253 RRM---TRGTSILATIGSTAPFVGLFGTVWGIMNAFIGISKSQTTNLAVVAPGIAEALLA 309
Query: 182 ILLGLCVSIPSSIAYNKF 199
+GL +IP+ + YN F
Sbjct: 310 TAMGLVAAIPAVMIYNMF 327
>gi|325275151|ref|ZP_08141124.1| TonB-system energizer ExbB type-1 [Pseudomonas sp. TJI-51]
gi|324099723|gb|EGB97596.1| TonB-system energizer ExbB type-1 [Pseudomonas sp. TJI-51]
Length = 321
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 102/236 (43%), Gaps = 44/236 (18%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFR-EFEQLFWSGQS 68
D+S + ++ + VK ++ L I SI++W++ I K + +R+ R E QL
Sbjct: 92 DLSPWGMYKNADIVVKIVMIGLAIASIITWTIWIAKGFELMGAKRRLRGEIAQL------ 145
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+LK+ + S +G + + D ++ M A ARE E I
Sbjct: 146 --KKATTLKDASEV---------------SSKEGTLAHTLVHDALEEMRLSANAREKEGI 188
Query: 129 TEKLSF-------------------LGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
E++SF L ++ S VG+ G V G+M F IA + N+
Sbjct: 189 KERVSFRLERLVHASGRNMSSGTGVLATIGSTAPFVGLFGTVWGIMNSFIGIAKTQTTNL 248
Query: 170 -VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
V PGI E+L++ LGL +IP+ + YN F + Q+ + + ++SR
Sbjct: 249 AVVAPGIAEALLATALGLVAAIPAVVIYNVFARSIAGYKAQVSDASAQVLLLVSRD 304
>gi|239832740|ref|ZP_04681069.1| tonB-system energizer ExbB [Ochrobactrum intermedium LMG 3301]
gi|239825007|gb|EEQ96575.1| tonB-system energizer ExbB [Ochrobactrum intermedium LMG 3301]
Length = 338
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 96/192 (50%), Gaps = 3/192 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S + +FM VK ++ L + S+ +W+V + KS+ RR+ + ++ +L
Sbjct: 106 DLSPWGMFMAADWVVKAVMIGLALASLATWTVWVAKSLELAGARRRAYKALKVIGHSATL 165
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSP-IGIQDRIDRMMDVAIARELEEI 128
++L G A + +A E + S AR+ G+++R+ + A+ +
Sbjct: 166 AEAVRALDGAKGPG-AVLVRAAEDEVRLSGPALARAGGEGLKERVSSRLSRIEAKAGRRL 224
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
++ L ++ S VG+ G V G+M F +I+ + N+ V PGI E+L++ +GL
Sbjct: 225 SKGTGVLATIGSVAPFVGLFGTVWGIMNSFINISQAQTTNLAVVAPGIAEALLATAIGLV 284
Query: 188 VSIPSSIAYNKF 199
+IP+ + YN F
Sbjct: 285 AAIPAVVIYNVF 296
>gi|289675543|ref|ZP_06496433.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. syringae
FF5]
gi|330976688|gb|EGH76731.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. aptata str.
DSM 50252]
Length = 242
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 99/209 (47%), Gaps = 5/209 (2%)
Query: 16 LFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKS 75
L+ Q + + + L + SI SW V++ K V R + + + FWS +L+ +
Sbjct: 11 LWQQADVVTRGVALTLLVMSIASWYVMVDKLVRLALHRLRSPKLLEAFWSAPTLKDGVQQ 70
Query: 76 LKNHHNIG-LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSF 134
L +H L +SA + + + D G P + ++R + A ++ ++
Sbjct: 71 LGHHSAYAELTQAGVSAARQHRDALD-GDMHPPAFSEWLNRALRQATLTVGGQLQGGMAI 129
Query: 135 LGSMSSAGLLVGILGAVLGMMGFFQSIA--GYYSNNVVSIPGIIESLISILLGLCVSIPS 192
L ++ S+ VG+LG V G+ I G S + V+ P + E+LI LGL V+IP+
Sbjct: 130 LATVGSSAPFVGLLGTVWGIYHALMKIGLTGDASIDKVAGP-VGETLIMTALGLAVAIPA 188
Query: 193 SIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
++ YN + +K+ ++ FA E +L
Sbjct: 189 TLGYNLLVRSNKQTLAELGKFAFELHDLL 217
>gi|298484814|ref|ZP_07002914.1| MotA/TolQ/ExbB proton channel family protein [Pseudomonas
savastanoi pv. savastanoi NCPPB 3335]
gi|298160668|gb|EFI01689.1| MotA/TolQ/ExbB proton channel family protein [Pseudomonas
savastanoi pv. savastanoi NCPPB 3335]
Length = 317
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 105/226 (46%), Gaps = 5/226 (2%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N+ G+A D+S + ++ + VK ++ L I SI++W++ I K + +R+ R
Sbjct: 77 NSLGMA-HDLSPWGMYQNADVVVKAVMIGLAIASIITWTIWISKGFELLGAKRRLRGEIV 135
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
+SL + + + A+ E + S + R GI++R+ ++ +
Sbjct: 136 NLKKARSLNEASSTASKEGTLA-HLLVHDALEEMRLSANSRERE--GIKERVSFRLERLV 192
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLI 180
A ++ L ++ S VG+ G V G+M F IA + N+ V PGI E+L+
Sbjct: 193 AACGRNMSMGTGVLATIGSTAPFVGLFGTVWGIMNSFIGIAKTQTTNLAVVAPGIAEALL 252
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+ LGL +IP+ + YN F + Q+ + + ++SR +
Sbjct: 253 ATALGLVAAIPAVVIYNVFARSIAGYKAQVSDASAQVLLLVSRDLD 298
>gi|238759130|ref|ZP_04620299.1| TonB complex protein [Yersinia aldovae ATCC 35236]
gi|238702678|gb|EEP95226.1| TonB complex protein [Yersinia aldovae ATCC 35236]
Length = 326
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 101/197 (51%), Gaps = 5/197 (2%)
Query: 5 GLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFW 64
GLA MD+S++ ++ + VK ++ L + SI++W+++ K RR+ ++ ++
Sbjct: 86 GLA-MDLSVWGMYQHADVVVKGVMIGLVLASIVTWTILFSKGTELFRARRRLQQEHEVIG 144
Query: 65 SGQSLETVCKSLKNHHNIGLAAIFM-SAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAR 123
+ L+T + + ++ + + A +E S + + GI++R ++ +A
Sbjct: 145 AVTDLDTASERAEAFTADSISGLLLREAQNERLLSAESDDNN--GIKERTAFRLERRVAA 202
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISI 182
++ + FL ++ + VG+ G V G+M F IA + N+ V PGI E+L++
Sbjct: 203 IGRQMGKGNGFLATIGAISPFVGLFGTVWGIMNSFIGIAHSQTTNLAVVAPGIAEALLAT 262
Query: 183 LLGLCVSIPSSIAYNKF 199
LGL +IP+ + YN F
Sbjct: 263 ALGLVAAIPAVVIYNIF 279
>gi|330945627|gb|EGH47117.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. pisi str.
1704B]
Length = 229
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 99/209 (47%), Gaps = 5/209 (2%)
Query: 16 LFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKS 75
L+ Q + + + L + SI SW V++ K V R + + + FWS +L+ +
Sbjct: 11 LWQQADVVTRGVALTLLVMSIASWYVMVDKLVRLALHRLRSPKLLEAFWSAPTLKDGVQQ 70
Query: 76 LKNHHNIG-LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSF 134
L +H L +SA + + + D G P + ++R + A ++ ++
Sbjct: 71 LGHHSAYAELTQAGVSAARQHRDALD-GDMHPPAFSEWLNRALRQATLTVGGQLQGGMAI 129
Query: 135 LGSMSSAGLLVGILGAVLGMMGFFQSIA--GYYSNNVVSIPGIIESLISILLGLCVSIPS 192
L ++ S+ VG+LG V G+ I G S + V+ P + E+LI LGL V+IP+
Sbjct: 130 LATVGSSAPFVGLLGTVWGIYHALMKIGLTGDASIDKVAGP-VGETLIMTALGLAVAIPA 188
Query: 193 SIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
++ YN + +K+ ++ FA E +L
Sbjct: 189 TLGYNLLVRSNKQTLAELGKFAFELHDLL 217
>gi|283850883|ref|ZP_06368169.1| MotA/TolQ/ExbB proton channel [Desulfovibrio sp. FW1012B]
gi|283573806|gb|EFC21780.1| MotA/TolQ/ExbB proton channel [Desulfovibrio sp. FW1012B]
Length = 248
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 100/214 (46%), Gaps = 11/214 (5%)
Query: 20 MGLAVKCIITLLFIFSILS---WSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSL 76
M A +I +L I +S WS+I K +R F +L + +L
Sbjct: 14 MASATPTVIFVLGILGFMSLGCWSIIFVKLFTLTAAKRDTARDYTRFQEADTLRSAMNAL 73
Query: 77 KNHH-----NIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEK 131
N+G A F + + D + I + D I R++ +++EL +++
Sbjct: 74 GQSRQSPAFNVGRLA-FEELVRMEQADLDPSEKGHIAM-DNIRRVLRQGVSQELAKLSSS 131
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCVSI 190
LSFL + ++A +G+ G V G+M F SI S + ++ PGI E+L++ +GL V+I
Sbjct: 132 LSFLATSANATPFIGLFGTVWGIMNSFHSIGLMQSAALAAVAPGISEALVATAIGLAVAI 191
Query: 191 PSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
P+ I+YN F+ + ++ FA F + R+
Sbjct: 192 PAVISYNFFLGYMQAIEGELVNFAGAFLNRIQRE 225
>gi|261819732|ref|YP_003257838.1| tonB-system energizer ExbB [Pectobacterium wasabiae WPP163]
gi|261603745|gb|ACX86231.1| tonB-system energizer ExbB [Pectobacterium wasabiae WPP163]
Length = 332
Score = 72.0 bits (175), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 97/194 (50%), Gaps = 8/194 (4%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQF-REFEQLFWSGQS 68
D+S++ ++ VK ++ L + S+++WS+ KSV +R+ RE+ L +
Sbjct: 97 DLSVWGMYQHADAVVKTVMIGLLLASVITWSIFFSKSVEMSGAKRRLRREYLAL----EQ 152
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPI--GIQDRIDRMMDVAIARELE 126
+T+ +L+ + ++ + + + + + ARS GI++R ++ +A
Sbjct: 153 AKTLDDALETADSFKAGSVALQLLEDAQNELELSARSDDNNGIKERTAFRLERRVAATGR 212
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLG 185
+ +L ++ + VG+ G V G+M F IA + N+ V PGI E+L++ +G
Sbjct: 213 HMGRGNGYLATVGAVAPFVGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGIAEALLATAIG 272
Query: 186 LCVSIPSSIAYNKF 199
L +IP+ + YN F
Sbjct: 273 LVAAIPAVVIYNVF 286
>gi|330957280|gb|EGH57540.1| TonB system transport protein ExbB1 [Pseudomonas syringae pv.
maculicola str. ES4326]
Length = 287
Score = 72.0 bits (175), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 104/226 (46%), Gaps = 5/226 (2%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N+ G+A D+S + ++ + VK ++ L I S+++W++ I K + +R+ R
Sbjct: 47 NSLGMA-HDLSPWGMYQNADVVVKAVMIGLAIASVITWTIWISKGFELLGAKRRLRGEIV 105
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
+SL S + + A+ E + S + R GI++R+ ++ +
Sbjct: 106 NLKKARSLNEASASASKEGTLA-HLLVHDALEEMRLSANSRERE--GIKERVSFRLERLV 162
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLI 180
A ++ L ++ S VG+ G V G+M F IA + N+ V PGI E+L+
Sbjct: 163 AACGRNMSMGTGVLATIGSTAPFVGLFGTVWGIMNSFIGIAKTQTTNLAVVAPGIAEALL 222
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+ LGL +IP+ + YN F + Q+ + ++SR +
Sbjct: 223 ATALGLVAAIPAVVIYNVFARSIAGYKAQVSDASAHVLLLVSRDLD 268
>gi|325123088|gb|ADY82611.1| tolerance to group A colicins, single-stranded DNA filamentous
phage, required for OM integrity [Acinetobacter
calcoaceticus PHEA-2]
Length = 185
Score = 72.0 bits (175), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 92/179 (51%), Gaps = 5/179 (2%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+ I L +Q V+ ++ +L + SI SW +I + +++ + F+++FWSG L
Sbjct: 9 LHISDLILQASPVVQLVMLILLLASIFSWYLIAKLHMSYKKAHQDDEHFQKMFWSGAELN 68
Query: 71 TVCKSLK-NHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQ-DRIDRMMDVAIARELEEI 128
T+ + + N GL IF +SE+ K K ++P+ + +R++ V ++R+ +
Sbjct: 69 TLYNNAQLNSKRSGLEDIFYQGLSEFFKL--KKRQAPVSQTIEGTERILRVGLSRDQSHL 126
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
L L S+ S +G+ G V G+M F +A + ++ PGI E+LI+ +GL
Sbjct: 127 EYGLGTLASIGSVAPYIGLFGTVWGIMNAFIGLAAVDQVTLATVAPGIAEALIATAIGL 185
>gi|289672859|ref|ZP_06493749.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. syringae
FF5]
gi|330977354|gb|EGH77304.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. aptata str.
DSM 50252]
Length = 317
Score = 72.0 bits (175), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 104/226 (46%), Gaps = 5/226 (2%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N+ G+A D+S + ++ + VK ++ L I SI++W++ I K + +R+ R
Sbjct: 77 NSLGMA-HDLSPWGMYQNADVVVKAVMIGLAIASIITWTIWISKGFELLGAKRRLRGEIA 135
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
+SL + + + A+ E + S + R GI++R+ ++ +
Sbjct: 136 NLKKARSLSEASATASTEGTLA-HLLVHDALEEMRLSANSRERE--GIKERVSFRLERLV 192
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLI 180
A ++ L ++ S VG+ G V G+M F IA + N+ V PGI E+L+
Sbjct: 193 AACGRNMSMGTGVLATIGSTAPFVGLFGTVWGIMNSFIGIAKTQTTNLAVVAPGIAEALL 252
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+ LGL +IP+ + YN F + Q+ + ++SR +
Sbjct: 253 ATALGLVAAIPAVVIYNVFARSIAGYKAQVSDASAHVLLLVSRDLD 298
>gi|254417731|ref|ZP_05031455.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Brevundimonas sp. BAL3]
gi|196183908|gb|EDX78884.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Brevundimonas sp. BAL3]
Length = 295
Score = 72.0 bits (175), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 112/232 (48%), Gaps = 14/232 (6%)
Query: 4 YGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLF 63
+G I IS +FM+ + VK ++ L + SILSW++++ K F L R+ F + F
Sbjct: 66 HGAGITPIS---MFMEATVIVKVVMIGLLLASILSWTLLLIKLFEFGALNRKTDNFLENF 122
Query: 64 WSGQSLETV-CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMD---V 119
+++ + S + + A +A +E + + S G D +D +
Sbjct: 123 RGARTIADMRAVSTQEEFDGNPLADMAAAATEEVEMSRQAGLSVTG--DHLDSALGRAQA 180
Query: 120 AIARELEEITEKLS----FLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPG 174
A+A + +LS FL S+ S G VG+ G V G+M F IA + N+ V PG
Sbjct: 181 AVAAVQSGLALRLSGGQQFLASVGSIGPFVGLFGTVYGIMNSFIGIAESNTTNLAVVAPG 240
Query: 175 IIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
I E+L++ +GL +IP+ + YN F + + +GFA E +SRQ +
Sbjct: 241 IAEALLATGIGLFAAIPAVVFYNYFNTRIAAYGTRADGFAAELLNGISRQLD 292
>gi|330862283|emb|CBX72444.1| biopolymer transport protein exbB [Yersinia enterocolitica W22703]
Length = 340
Score = 72.0 bits (175), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 100/197 (50%), Gaps = 5/197 (2%)
Query: 5 GLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFW 64
GLA MD+S++ ++ + VK ++ L + SI++W+++ K RR+ ++ ++
Sbjct: 101 GLA-MDLSVWGMYQHADVVVKGVMIGLVLASIVTWTILFSKGTELFRARRRLQQEHEVIG 159
Query: 65 SGQSLETVCKSLKNHHNIGLAAIFM-SAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAR 123
+ L+T + ++ + + A +E S + + GI++R ++ +A
Sbjct: 160 AVTDLDTASERAAAFSPESISGLLLREAQNERLLSAESNDNN--GIKERTAFRLERRVAA 217
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISI 182
++ + FL ++ + VG+ G V G+M F IA + N+ V PGI E+L++
Sbjct: 218 ISRQMGKGNGFLATIGAISPFVGLFGTVWGIMNSFIGIAHSQTTNLAVVAPGIAEALLAT 277
Query: 183 LLGLCVSIPSSIAYNKF 199
LGL +IP+ + YN F
Sbjct: 278 ALGLVAAIPAVVIYNIF 294
>gi|255588558|ref|XP_002534642.1| Biopolymer transport exbB protein, putative [Ricinus communis]
gi|223524846|gb|EEF27737.1| Biopolymer transport exbB protein, putative [Ricinus communis]
Length = 240
Score = 72.0 bits (175), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 95/226 (42%), Gaps = 15/226 (6%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
M+ YGL L+ Q +A++ I +L SI SWSVI+ KS+ F LRR E
Sbjct: 1 MHAYGL-------LHLWQQGDIAMRAIAMILLAMSIASWSVIVVKSLEFSRLRRLATHAE 53
Query: 61 QLFWSGQSLETVCKSLKNH----HNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRM 116
Q FW E + L H + A A+ + + P D + R
Sbjct: 54 QQFWHADDFEAAMRGLGAPGTPLHELACAGQAAVALHDANRGRLIDCVDP---SDWLLRN 110
Query: 117 MDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII 176
+ +I + L+ L S+ S VG+ G V G+ + + + G +
Sbjct: 111 LKSSIDESTSRLQRGLAVLASIGSTAPFVGLFGTVWGIYHALLMLGTGGQARIDQVAGPV 170
Query: 177 -ESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
E+LI GL V+IP+ + YN ++ +++ FA+ ++L
Sbjct: 171 GEALIMTAFGLFVAIPAVLGYNGLTRLNRDIVVRLNRFAHALHSLL 216
>gi|66043475|ref|YP_233316.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. syringae
B728a]
gi|63254182|gb|AAY35278.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. syringae
B728a]
Length = 320
Score = 72.0 bits (175), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 104/226 (46%), Gaps = 5/226 (2%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N+ G+A D+S + ++ + VK ++ L I SI++W++ I K + +R+ R
Sbjct: 80 NSLGMA-HDLSPWGMYQNADVVVKAVMIGLAIASIMTWTIWISKGFELLGAKRRLRGEIA 138
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
+SL + + + A+ E + S + R GI++R+ ++ +
Sbjct: 139 NLKKARSLTEASATASTEGTLA-HLLVHDALEEMRLSANSRERE--GIKERVSFRLERLV 195
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLI 180
A ++ L ++ S VG+ G V G+M F IA + N+ V PGI E+L+
Sbjct: 196 AACGRNMSMGTGVLATIGSTAPFVGLFGTVWGIMNSFIGIAKTQTTNLAVVAPGIAEALL 255
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+ LGL +IP+ + YN F + Q+ + ++SR +
Sbjct: 256 ATALGLVAAIPAVVIYNVFARSIAGYKAQVSDASAHVLLLVSRDLD 301
>gi|330873188|gb|EGH07337.1| TonB system transport protein ExbB1 [Pseudomonas syringae pv.
glycinea str. race 4]
Length = 302
Score = 72.0 bits (175), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 104/226 (46%), Gaps = 5/226 (2%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N+ G+A D+S + ++ + VK ++ L I SI++W++ I K + +R+ R
Sbjct: 62 NSLGMA-HDLSPWGMYQNADVVVKAVMIGLAIVSIITWTIWISKGFELLGAKRRLRGEIV 120
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
+SL + + + A+ E + S + R GI++R+ ++ +
Sbjct: 121 NLKKARSLNEASSTASKEGTLA-HLLVHDALEEMRLSANSRERE--GIKERVSFRLERLV 177
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLI 180
A ++ L ++ S VG+ G V G+M F IA + N+ V PGI E+L+
Sbjct: 178 AACGRNMSMGTGVLATIGSTAPFVGLFGTVWGIMNSFIGIAKTQTTNLAVVAPGIAEALL 237
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+ LGL +IP+ + YN F + Q+ + ++SR +
Sbjct: 238 ATALGLVAAIPAVVIYNVFARSIAGYKAQVSDASAHVLLLVSRDLD 283
>gi|326559276|gb|EGE09704.1| MotA/TolQ/ExbB proton channel [Moraxella catarrhalis 103P14B1]
gi|326564930|gb|EGE15132.1| MotA/TolQ/ExbB proton channel [Moraxella catarrhalis 46P47B1]
gi|326566620|gb|EGE16762.1| MotA/TolQ/ExbB proton channel [Moraxella catarrhalis BC1]
gi|326567860|gb|EGE17961.1| MotA/TolQ/ExbB proton channel [Moraxella catarrhalis 12P80B1]
gi|326571035|gb|EGE21059.1| MotA/TolQ/ExbB proton channel [Moraxella catarrhalis BC7]
gi|326573332|gb|EGE23300.1| MotA/TolQ/ExbB proton channel [Moraxella catarrhalis 101P30B1]
gi|326575770|gb|EGE25693.1| MotA/TolQ/ExbB proton channel [Moraxella catarrhalis CO72]
gi|326576852|gb|EGE26758.1| MotA/TolQ/ExbB proton channel [Moraxella catarrhalis O35E]
Length = 229
Score = 72.0 bits (175), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 90/197 (45%), Gaps = 1/197 (0%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
IS+ +L ++ + VK ++ +L + S +SW +I + + + FE+ FW+
Sbjct: 5 ISLISLVIEASVVVKLVMAILLLLSTISWVLIFHLGTKIGGIAKFDKRFERWFWTDDIDH 64
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
+ GL IF + + + S ++R + +A+ E + +
Sbjct: 65 QLSVVQAESERAGLELIFYTGFYDQNHQDQDSSLSDDKKVQIVERRLRMALGSEQVHLEK 124
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCVS 189
LS L ++ S +G+ G V G+M F + S + ++ P I E+LI+ LGL +
Sbjct: 125 GLSTLATIGSVSPYIGLFGTVWGIMNAFIGLGQAESVGLATVAPSIAEALIATALGLFAA 184
Query: 190 IPSSIAYNKFIEDSKKF 206
IP+++AYN F S
Sbjct: 185 IPATMAYNHFATKSNTL 201
>gi|91780432|ref|YP_555639.1| putative MotA/TolQ/ExbB proton channel [Burkholderia xenovorans
LB400]
gi|91693092|gb|ABE36289.1| outer membrane transport energization protein ExbB [Burkholderia
xenovorans LB400]
Length = 309
Score = 72.0 bits (175), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 105/228 (46%), Gaps = 25/228 (10%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YGL AL+ L + ++ LL I S+ SW ++I K + + R+ + ++
Sbjct: 84 NPYGLG-------ALWKNGDLVARFVLILLVIMSMGSWYIMITKFLEQLRANRRAKSADE 136
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDR--MMDV 119
WS SL + L + A + + GA + + +DR +DV
Sbjct: 137 QLWSAPSLAQGAEQLDGNSPFRFIA---------QVGIEAGAHHEEALLEAVDRNTWIDV 187
Query: 120 AIARELEEITEK----LSFLGSMSSAGLLVGILGAVLGMMGFFQS--IAGYYSNNVVSIP 173
+I R + ++ + L+FLG++ S VG+ G V G+ + IAG S + V+ P
Sbjct: 188 SIDRAITNVSNRLQDGLAFLGTVGSTAPFVGLFGTVWGIYHALTAIGIAGQASIDKVAGP 247
Query: 174 GIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+ E+LI +GL V++P+ + YN + +K ++ F + +L
Sbjct: 248 -VGEALIMTAIGLAVAVPAVLGYNFLVRRNKSVMERVRAFGAQLHTVL 294
>gi|330972214|gb|EGH72280.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. aceris str.
M302273PT]
Length = 320
Score = 72.0 bits (175), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 104/226 (46%), Gaps = 5/226 (2%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N+ G+A D+S + ++ + VK ++ L I SI++W++ I K + +R+ R
Sbjct: 80 NSLGMA-HDLSPWGMYQNADVVVKAVMIGLAIASIITWTIWISKGFELLGAKRRLRGEIA 138
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
+SL + + + A+ E + S + R GI++R+ ++ +
Sbjct: 139 NLKKARSLTEASATASTEGTLA-HLLVHDALEEMRLSANSRERE--GIKERVSFRLERLV 195
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLI 180
A ++ L ++ S VG+ G V G+M F IA + N+ V PGI E+L+
Sbjct: 196 AACGRNMSMGTGVLATIGSTAPFVGLFGTVWGIMNSFIGIAKTQTTNLAVVAPGIAEALL 255
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+ LGL +IP+ + YN F + Q+ + ++SR +
Sbjct: 256 ATALGLVAAIPAVVIYNVFARSIAGYKAQVSDASAHVLLLVSRDLD 301
>gi|260550124|ref|ZP_05824338.1| biopolymer transporter [Acinetobacter sp. RUH2624]
gi|260406879|gb|EEX00358.1| biopolymer transporter [Acinetobacter sp. RUH2624]
Length = 292
Score = 72.0 bits (175), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 107/232 (46%), Gaps = 33/232 (14%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YGL AL+ + L K + +L + SI +W +I+ K + ++RQ +E E+
Sbjct: 66 NPYGLE-------ALWREGDLVAKSTLFILVLMSIGTWYIIVSKFLQQAKVKRQGKEAEK 118
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPI----GIQDRID--R 115
FW SL+ L+ S ++ +KG S + +RID
Sbjct: 119 SFWEATSLDNATDGLEQS-------------SAYRFIAEKGINSTKSHGGSLLERIDFNT 165
Query: 116 MMDVAIARELEEITEK----LSFLGSMSSAGLLVGILGAVLGMMGFFQS--IAGYYSNNV 169
+ ++I R +E++ L+FL ++ S VG+ G V G+ + I+G S +
Sbjct: 166 WVSISIQRAIEKVQNHLGGGLAFLATVGSTAPFVGLFGTVWGIYHALTAIGISGQASIDK 225
Query: 170 VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
V+ P + E+LI +GL V++P+ + YN +K + F ++ A+L
Sbjct: 226 VAGP-VGEALIMTAIGLAVAVPAVLGYNWLTRRNKAVMENVRSFGSDLHAVL 276
>gi|148252869|ref|YP_001237454.1| putative biopolymer transport protein [Bradyrhizobium sp. BTAi1]
gi|146405042|gb|ABQ33548.1| outer membrane transport energization protein ExbB [Bradyrhizobium
sp. BTAi1]
Length = 274
Score = 72.0 bits (175), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 96/198 (48%), Gaps = 5/198 (2%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S +++F+ + VK ++ L + S+ +W+V I K++ F LRR+ + + L
Sbjct: 32 DLSPWSMFLAADILVKAVMMGLALASLATWTVFIAKTIEFAMLRRKLKRALHKVADVRWL 91
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+L + ++ L + +AM E + S + + G+ +R + E
Sbjct: 92 SEAKLALGSRESV-LTTMIDAAMHEIRMSSELPSH---GVNERAASSFAEIVRAEGRRCR 147
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCV 188
+ L ++ S VG+ G V G+M F I+ + N+ V PGI E+L++ +GL
Sbjct: 148 TGMGLLATIGSISPFVGLFGTVWGIMNSFIGISKSQTTNLAVVAPGIAEALLATAIGLVA 207
Query: 189 SIPSSIAYNKFIEDSKKF 206
+IP+ I YN F +K +
Sbjct: 208 AIPAVIIYNHFTRVTKGY 225
>gi|332162965|ref|YP_004299542.1| MotA/TolQ/ExbB proton channel family protein [Yersinia
enterocolitica subsp. palearctica 105.5R(r)]
gi|325667195|gb|ADZ43839.1| MotA/TolQ/ExbB proton channel family protein [Yersinia
enterocolitica subsp. palearctica 105.5R(r)]
Length = 336
Score = 72.0 bits (175), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 100/197 (50%), Gaps = 5/197 (2%)
Query: 5 GLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFW 64
GLA MD+S++ ++ + VK ++ L + SI++W+++ K RR+ ++ ++
Sbjct: 97 GLA-MDLSVWGMYQHADVVVKGVMIGLVLASIVTWTILFSKGTELFRARRRLQQEHEVIG 155
Query: 65 SGQSLETVCKSLKNHHNIGLAAIFM-SAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAR 123
+ L+T + ++ + + A +E S + + GI++R ++ +A
Sbjct: 156 AVTDLDTASERAAAFSPESISGLLLREAQNERLLSAESNDNN--GIKERTAFRLERRVAA 213
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISI 182
++ + FL ++ + VG+ G V G+M F IA + N+ V PGI E+L++
Sbjct: 214 ISRQMGKGNGFLATIGAISPFVGLFGTVWGIMNSFIGIAHSQTTNLAVVAPGIAEALLAT 273
Query: 183 LLGLCVSIPSSIAYNKF 199
LGL +IP+ + YN F
Sbjct: 274 ALGLVAAIPAVVIYNIF 290
>gi|320322263|gb|EFW78359.1| TonB system transport protein ExbB1 [Pseudomonas syringae pv.
glycinea str. B076]
gi|320331912|gb|EFW87850.1| TonB system transport protein ExbB1 [Pseudomonas syringae pv.
glycinea str. race 4]
Length = 314
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 104/226 (46%), Gaps = 5/226 (2%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N+ G+A D+S + ++ + VK ++ L I SI++W++ I K + +R+ R
Sbjct: 74 NSLGMA-HDLSPWGMYQNADVVVKAVMIGLAIVSIITWTIWISKGFELLGAKRRLRGEIV 132
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
+SL + + + A+ E + S + R GI++R+ ++ +
Sbjct: 133 NLKKARSLNEASSTASKEGTLA-HLLVHDALEEMRLSANSRERE--GIKERVSFRLERLV 189
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLI 180
A ++ L ++ S VG+ G V G+M F IA + N+ V PGI E+L+
Sbjct: 190 AACGRNMSMGTGVLATIGSTAPFVGLFGTVWGIMNSFIGIAKTQTTNLAVVAPGIAEALL 249
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+ LGL +IP+ + YN F + Q+ + ++SR +
Sbjct: 250 ATALGLVAAIPAVVIYNVFARSIAGYKAQVSDASAHVLLLVSRDLD 295
>gi|123443831|ref|YP_001007802.1| MotA/TolQ/ExbB proton channel family protein [Yersinia
enterocolitica subsp. enterocolitica 8081]
gi|122090792|emb|CAL13674.1| MotA/TolQ/ExbB proton channel family protein [Yersinia
enterocolitica subsp. enterocolitica 8081]
Length = 237
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 97/193 (50%), Gaps = 4/193 (2%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
MD+S++ ++ + VK ++ L + SI++W+++ K RR+ ++ ++ +
Sbjct: 1 MDLSVWGMYQHADVVVKGVMIGLVLASIVTWTILFSKGTELFRARRRLQQEHEVIGAVTD 60
Query: 69 LETVCKSLKNHHNIGLAAIFM-SAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
L+T + ++ + + A +E S + + GI++R ++ +A +
Sbjct: 61 LDTASERAAAFSPESISGLLLREAQNERLLSAESNDNN--GIKERTAFRLERRVAAISRQ 118
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
+ + FL ++ + VG+ G V G+M F IA + N+ V PGI E+L++ LGL
Sbjct: 119 MGKGNGFLATIGAISPFVGLFGTVWGIMNSFIGIAHSQTTNLAVVAPGIAEALLATALGL 178
Query: 187 CVSIPSSIAYNKF 199
+IP+ + YN F
Sbjct: 179 VAAIPAVVIYNIF 191
>gi|156932496|ref|YP_001436412.1| biopolymer transport protein ExbB [Cronobacter sakazakii ATCC
BAA-894]
gi|156530750|gb|ABU75576.1| hypothetical protein ESA_00276 [Cronobacter sakazakii ATCC BAA-894]
Length = 239
Score = 71.6 bits (174), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 95/191 (49%), Gaps = 2/191 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S++ ++ + VK ++ L + S+++W++ KSV +R+ + +Q ++L
Sbjct: 4 DLSVWGMYQHADIVVKIVMIGLILASVVTWAIFFSKSVELSGHKRRLKREQQELAGARTL 63
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+ + + L+A + ++ ++ G+ GI++R ++ +A +
Sbjct: 64 DDAREMAERFGPKSLSARLIEE-AQNERELSAGSEDNEGIKERTGFRLERRVAAAGRHMG 122
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCV 188
+L ++ + VG+ G V G+M F IA + N+ V PGI E+L++ +GL
Sbjct: 123 RGNGYLATIGAISPFVGLFGTVWGIMNSFIGIAQSQTTNLAVVAPGIAEALLATAIGLVA 182
Query: 189 SIPSSIAYNKF 199
+IP+ + YN F
Sbjct: 183 AIPAVVIYNIF 193
>gi|237748567|ref|ZP_04579047.1| MotA/TolQ/ExbB proton channel family protein [Oxalobacter
formigenes OXCC13]
gi|229379929|gb|EEO30020.1| MotA/TolQ/ExbB proton channel family protein [Oxalobacter
formigenes OXCC13]
Length = 249
Score = 71.6 bits (174), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 95/206 (46%), Gaps = 11/206 (5%)
Query: 25 KCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGL 84
K I+ +L SI+SW++II K + ++ +F FW+ SL+TV ++ H G+
Sbjct: 22 KTILAILIGMSIVSWTLIIIKGIAGWRRKQYSNQFLHFFWNASSLDTVRHEIQTH---GI 78
Query: 85 AAIFMSAMSEWKKSCDKGAR------SPIGIQDR-IDRMMDVAIARELEEITEKLSFLGS 137
F S + + + S G Q + R M + + + + L+ L +
Sbjct: 79 RCPFSHLTSHAQHAQEHHVHYGAAKLSEAGTQQEFVIRTMRMVMDEDAARLENGLTVLAT 138
Query: 138 MSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCVSIPSSIAY 196
+ S +G+ G V G+ +I+ + + + G + E+LI +GL V+IP+ I Y
Sbjct: 139 IGSTAPFIGLFGTVWGIYNALINISASGAGTLDKVAGPVGEALIMTGIGLAVAIPAVIGY 198
Query: 197 NKFIEDSKKFAMQMEGFANEFSAILS 222
N + + +++ FANE L+
Sbjct: 199 NWLVRSNNVLMSKLDTFANELLTFLT 224
>gi|153008585|ref|YP_001369800.1| TonB-system energizer ExbB type-1 [Ochrobactrum anthropi ATCC
49188]
gi|151560473|gb|ABS13971.1| TonB-system energizer ExbB type-1 [Ochrobactrum anthropi ATCC
49188]
Length = 338
Score = 71.6 bits (174), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 95/192 (49%), Gaps = 3/192 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S + +FM VK ++ L I S+ +W+V + K++ RR+ + ++ +L
Sbjct: 106 DLSPWGMFMAADWVVKAVMIGLAIASLATWTVWVAKTLELAGARRRATKALKVIGHSATL 165
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSP-IGIQDRIDRMMDVAIARELEEI 128
+L G A + +A E + S AR+ G+++R+ + A+ +
Sbjct: 166 AEAVHALDGAKGPG-AVLVRAAEDEVRLSGPALARAGGEGLKERVSSRLSRIEAKAGRRL 224
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
++ L ++ S VG+ G V G+M F +I+ + N+ V PGI E+L++ +GL
Sbjct: 225 SKGTGILATIGSVAPFVGLFGTVWGIMNSFINISQAQTTNLAVVAPGIAEALLATAIGLV 284
Query: 188 VSIPSSIAYNKF 199
+IP+ + YN F
Sbjct: 285 AAIPAVVIYNVF 296
>gi|86749211|ref|YP_485707.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris HaA2]
gi|86572239|gb|ABD06796.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris HaA2]
Length = 313
Score = 71.6 bits (174), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 101/200 (50%), Gaps = 4/200 (2%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
+ ++S +++F+Q + VK ++ L + S+++W+++I K + R + R + +
Sbjct: 84 LTELSPWSMFLQADIVVKAVMVGLALASMITWTILIAKKIELGRARWRLRSALKQIADAR 143
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
S+ +L + + ++ + +A+ E + S G S GI++R + E
Sbjct: 144 SMSEAQLALGDKTS-PVSMLLAAALREARVSA--GLASDEGIKERAASSFSEIVRAESRH 200
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
+ + FL ++ + +G+ G V G+M F I+ + N+ V PGI E+L++ +GL
Sbjct: 201 MRHGMGFLATIGATAPFIGLFGTVWGIMNSFIGISKSQTTNLAVVAPGIAEALLATAIGL 260
Query: 187 CVSIPSSIAYNKFIEDSKKF 206
+IP+ I YN F + K +
Sbjct: 261 VAAIPAVIIYNHFSREIKVY 280
>gi|158422882|ref|YP_001524174.1| biopolymer transport protein [Azorhizobium caulinodans ORS 571]
gi|158329771|dbj|BAF87256.1| biopolymer transport protein [Azorhizobium caulinodans ORS 571]
Length = 394
Score = 71.6 bits (174), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 103/221 (46%), Gaps = 11/221 (4%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S + +FM + VK +++ L + S+++W++ + K + T RQ R +L
Sbjct: 167 DLSPWGMFMAADIVVKVVMSGLALASVITWTIWLVKVLELTTANRQVRRALHTLRESSNL 226
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRID---RMMDVAIARELE 126
++L A + SA+ E + S A GI++R+ ++ A R +
Sbjct: 227 LGSARALPPRGGAS-ARLIQSALGELEASRALPAE---GIKERVAISLNRIEAAAGRRMS 282
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLG 185
T L+ +GS + +G+ G V G+M F I+ + N+ V PGI E+L++ +G
Sbjct: 283 LGTGLLATIGSTAP---FIGLFGTVWGIMNSFIGISKAQTTNLAVVAPGIAEALLATAIG 339
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
L +IP+ I YN F + + + E LSR +
Sbjct: 340 LVAAIPAVIIYNVFARAISNYKASLSDASAEVMRHLSRDLD 380
>gi|86748778|ref|YP_485274.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris HaA2]
gi|86571806|gb|ABD06363.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris HaA2]
Length = 286
Score = 71.6 bits (174), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 103/220 (46%), Gaps = 6/220 (2%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S +A+F+ VK +I L + S+ +W+V + K + + R+ R + +L
Sbjct: 50 DLSPWAMFVAADNIVKAVIIGLALASLATWTVWLVKVIELTSALRKARSALRKLQRADNL 109
Query: 70 ETVCKSLKNH--HNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ ++ + +A + +A+ E ++S D A G+++R+ + AR +
Sbjct: 110 ADATREIEAEWTKDGPVADLVQAALRETERSVDLAAD---GVKERLAIALSRIEARAGRD 166
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
+ L ++ + +G+ G V G+M F IA + N+ V PGI E+L++ +GL
Sbjct: 167 MARSTGLLATIGATAPFIGLFGTVWGIMNSFIGIAQSKTTNLAVVAPGIAEALLATAIGL 226
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ I YN F + + + E LSR E
Sbjct: 227 VAAIPAVIIYNVFARAIAGYRALLSDASGEVLQHLSRDLE 266
>gi|289625454|ref|ZP_06458408.1| TonB system transport protein ExbB1 [Pseudomonas syringae pv.
aesculi str. NCPPB3681]
gi|289646380|ref|ZP_06477723.1| TonB system transport protein ExbB1 [Pseudomonas syringae pv.
aesculi str. 2250]
gi|330866519|gb|EGH01228.1| TonB system transport protein ExbB1 [Pseudomonas syringae pv.
aesculi str. 0893_23]
Length = 317
Score = 71.6 bits (174), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 104/226 (46%), Gaps = 5/226 (2%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N+ G+A D+S + ++ + VK ++ L I SI++W++ I K + +R+ R
Sbjct: 77 NSLGMA-HDLSPWGMYQNADVVVKAVMIGLAIASIITWTIWISKGFELLGAKRRLRGEIV 135
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
+SL + + + A+ E + S + R GI++R+ ++ +
Sbjct: 136 NLKKARSLNEASSTASKEGTLA-HLLVHDALEEMRLSANSRERE--GIKERVSFRLERLV 192
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLI 180
A ++ L ++ S VG+ G V G+M F IA + N+ V PGI E+L+
Sbjct: 193 AACGRNMSMGTGVLATIGSTAPFVGLFGTVWGIMNSFIGIAKTQTTNLAVVAPGIAEALL 252
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+ LGL +IP+ + YN F + Q+ + ++SR +
Sbjct: 253 ATALGLVAAIPAVVIYNVFARSIAGYKAQVSDASAHVLLLVSRDLD 298
>gi|148559259|ref|YP_001259522.1| ExbB protein [Brucella ovis ATCC 25840]
gi|148370516|gb|ABQ60495.1| ExbB [Brucella ovis ATCC 25840]
Length = 310
Score = 71.6 bits (174), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 94/192 (48%), Gaps = 3/192 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S + +FM VK ++ L I S+ +W+V + KS+ RR+ + ++ +L
Sbjct: 75 DLSPWGMFMAADWVVKAVMIGLAIASLATWTVWVAKSLELAGARRRANKALKIIGHSATL 134
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARS-PIGIQDRIDRMMDVAIARELEEI 128
+L G AA +A E + S AR+ G+++R+ + A+ +
Sbjct: 135 NDAVHALDGAKGPG-AAFVRAAEDEVRLSGPALARAGGEGLKERVASRLSRIEAKAGRRL 193
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
+ L ++ S VG+ G V G+M F +I+ + N+ V PGI E+L++ +GL
Sbjct: 194 AKGTGILATIGSVAPFVGLFGTVWGIMNSFINISEAQTTNLAVVAPGIAEALLATAIGLV 253
Query: 188 VSIPSSIAYNKF 199
+IP+ + Y+ F
Sbjct: 254 AAIPAVVIYDVF 265
>gi|257481748|ref|ZP_05635789.1| TonB system transport protein ExbB1 [Pseudomonas syringae pv.
tabaci ATCC 11528]
Length = 317
Score = 71.6 bits (174), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 104/226 (46%), Gaps = 5/226 (2%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N+ G+A D+S + ++ + VK ++ L I SI++W++ I K + +R+ R
Sbjct: 77 NSLGMA-HDLSPWGMYQNADVVVKAVMIGLAIASIITWTIWISKGFELLGAKRRLRGEIV 135
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
+SL + + + A+ E + S + R GI++R+ ++ +
Sbjct: 136 NLKKARSLNEASSTASKEGTLA-HLLVHDALEEMRLSANSRERE--GIKERVSFRLERLV 192
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLI 180
A ++ L ++ S VG+ G V G+M F IA + N+ V PGI E+L+
Sbjct: 193 AACGRNMSMGTGVLATIGSTAPFVGLFGTVWGIMNSFIGIAKTQTTNLAVVAPGIAEALL 252
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+ LGL +IP+ + YN F + Q+ + ++SR +
Sbjct: 253 ATALGLVAAIPAVVIYNVFARSIAGYKAQVSDASAHVLLLVSRDLD 298
>gi|330986877|gb|EGH84980.1| TonB system transport protein ExbB1 [Pseudomonas syringae pv.
lachrymans str. M301315]
Length = 317
Score = 71.6 bits (174), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 104/226 (46%), Gaps = 5/226 (2%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N+ G+A D+S + ++ + VK ++ L I SI++W++ I K + +R+ R
Sbjct: 77 NSLGMA-HDLSPWGMYQNADVVVKAVMIGLAIASIITWTIWISKGFELLGAKRRLRGEIV 135
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
+SL + + + A+ E + S + R GI++R+ ++ +
Sbjct: 136 NLKKARSLNEASSTASKEGTLA-HLLVHDALEEMRLSANSRERE--GIKERVSFRLERLV 192
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLI 180
A ++ L ++ S VG+ G V G+M F IA + N+ V PGI E+L+
Sbjct: 193 AACGRNMSMGTGVLATIGSTAPFVGLFGTVWGIMNSFIGIAKTQTTNLAVVAPGIAEALL 252
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+ LGL +IP+ + YN F + Q+ + ++SR +
Sbjct: 253 ATALGLVAAIPAVVIYNVFARSIAGYKAQVSDASAHVLLLVSRDLD 298
>gi|75674900|ref|YP_317321.1| MotA/TolQ/ExbB proton channel [Nitrobacter winogradskyi Nb-255]
gi|74419770|gb|ABA03969.1| outer membrane transport energization protein ExbB [Nitrobacter
winogradskyi Nb-255]
Length = 400
Score = 71.2 bits (173), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 92/193 (47%), Gaps = 6/193 (3%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S + +FMQ + VK ++ L S+++W+V + K + RR+ + + SL
Sbjct: 163 DLSPWGMFMQADIVVKAVMIGLAFASLVTWTVWLAKGIELAASRRRAQSCVRKLERADSL 222
Query: 70 ETVCKSLKNHHNI-GLAAIFMSAMS-EWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + G A M A E ++S D + GI++R+ + A+ +
Sbjct: 223 DAARSEIAEGWTCEGTVADLMGAAERELQRSGDLSSE---GIKERLAIALSRIEAKAGRD 279
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
I L ++ + VG+ G V G+M F I+ + N+ V PGI E+L++ LGL
Sbjct: 280 IARGTGLLATIGATAPFVGLFGTVWGIMNAFIGISQTKTTNLAVVAPGIAEALLATALGL 339
Query: 187 CVSIPSSIAYNKF 199
+IP+ I YN F
Sbjct: 340 VAAIPAVIIYNVF 352
>gi|187929196|ref|YP_001899683.1| MotA/TolQ/ExbB proton channel [Ralstonia pickettii 12J]
gi|187726086|gb|ACD27251.1| MotA/TolQ/ExbB proton channel [Ralstonia pickettii 12J]
Length = 242
Score = 71.2 bits (173), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 94/215 (43%), Gaps = 3/215 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
+ ++ + L+ Q + + LL I S+ SW VI K+ + + L+ + E+ FW
Sbjct: 1 MQELGLSHLWTQGDIVTRATAILLLIMSLASWIVIFTKAWDIVRLKSMAQGAEKRFWHSD 60
Query: 68 SLETVCKSLKNHHNIGLAAIFMSA--MSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
+ ++L + + A+ + ++ ++ + I D I R + AI +
Sbjct: 61 DFDHAIQTLGSPKDNPFHALAQTGREAAQHHRASQPQLHDVMDISDWITRSLKSAIDEAV 120
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILL 184
++ L+ L S+ S VG+ G V G+ I + + G + ESLI
Sbjct: 121 GQMQSGLAVLASVGSTAPFVGLFGTVWGIYHALLGIGAVGVPTIDKVAGPVGESLIMTAF 180
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
GL V+IP+ + YN +K ++ FA++ A
Sbjct: 181 GLAVAIPAVLGYNALTRGNKAIIAKLNRFAHDLHA 215
>gi|75676230|ref|YP_318651.1| MotA/TolQ/ExbB proton channel [Nitrobacter winogradskyi Nb-255]
gi|74421100|gb|ABA05299.1| outer membrane transport energization protein ExbB [Nitrobacter
winogradskyi Nb-255]
Length = 421
Score = 71.2 bits (173), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 92/193 (47%), Gaps = 6/193 (3%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S + +FMQ + VK ++ L S+++W+V + K + RR+ + + SL
Sbjct: 184 DLSPWGMFMQADIVVKAVMIGLAFASLVTWTVWLAKGIELAASRRRAQSCVRKLERADSL 243
Query: 70 ETVCKSLKNHHNI-GLAAIFMSAMS-EWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + G A M A E ++S D + GI++R+ + A+ +
Sbjct: 244 DAARSEIAEGWTCEGTVADLMGAAERELQRSGDLSSE---GIKERLAIALSRIEAKAGRD 300
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
I L ++ + VG+ G V G+M F I+ + N+ V PGI E+L++ LGL
Sbjct: 301 IARGTGLLATIGATAPFVGLFGTVWGIMNAFIGISQTKTTNLAVVAPGIAEALLATALGL 360
Query: 187 CVSIPSSIAYNKF 199
+IP+ I YN F
Sbjct: 361 VAAIPAVIIYNVF 373
>gi|292900653|ref|YP_003540022.1| biopolymer transport protein [Erwinia amylovora ATCC 49946]
gi|291200501|emb|CBJ47630.1| biopolymer transport protein [Erwinia amylovora ATCC 49946]
Length = 244
Score = 71.2 bits (173), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 95/193 (49%), Gaps = 4/193 (2%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
MD+S++ ++ + VK ++ L + S+ +W++ KS+ + R++ + + + +S
Sbjct: 8 MDLSVWGMYQHADIVVKAVMIGLLLASVATWAIFFSKSIELRSARKRLKREQLSLAAARS 67
Query: 69 LETVCKSLKNHHNIGLAAIFMS-AMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
LE + L+ + + A +E + S + + GI++R ++ +A
Sbjct: 68 LEEALQIGGGFQRQSLSTLLVKEAENELELSANSDDNN--GIKERTAFRLERQVAAIGRH 125
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
FL ++ S VG+ G V G+M F IA + N+ V PGI E+L++ +GL
Sbjct: 126 AGRGNGFLATIGSIAPFVGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGIAEALLATAIGL 185
Query: 187 CVSIPSSIAYNKF 199
+IP+ + YN F
Sbjct: 186 VAAIPAVVIYNVF 198
>gi|330952135|gb|EGH52395.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae Cit 7]
Length = 317
Score = 71.2 bits (173), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 104/226 (46%), Gaps = 5/226 (2%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N+ G+A D+S + ++ + VK ++ L I SI++W++ I K + +R+ R
Sbjct: 77 NSLGMA-HDLSPWGMYQNADVVVKAVMIGLAIASIITWTIWISKGFELLGAKRRLRGEIV 135
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
+SL + + + A+ E + S + R GI++R+ ++ +
Sbjct: 136 NLKKARSLTEASATASKEGTLA-HLLVHDALEEMRLSANSRERE--GIKERVSFRLERLV 192
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLI 180
A ++ L ++ S VG+ G V G+M F IA + N+ V PGI E+L+
Sbjct: 193 AACGRNMSMGTGVLATIGSTAPFVGLFGTVWGIMNSFIGIAKTQTTNLAVVAPGIAEALL 252
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+ LGL +IP+ + YN F + Q+ + ++SR +
Sbjct: 253 ATALGLVAAIPAVVIYNVFARSIAGYKAQVSDASAHVLLLVSRDLD 298
>gi|292486957|ref|YP_003529827.1| biopolymer transport exbb protein [Erwinia amylovora CFBP1430]
gi|291552374|emb|CBA19419.1| Biopolymer transport exbB protein [Erwinia amylovora CFBP1430]
Length = 239
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 95/193 (49%), Gaps = 4/193 (2%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
MD+S++ ++ + VK ++ L + S+ +W++ KS+ + R++ + + + +S
Sbjct: 3 MDLSVWGMYQHADIVVKAVMIGLLLASVATWAIFFSKSIELRSARKRLKREQLSLAAARS 62
Query: 69 LETVCKSLKNHHNIGLAAIFMS-AMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
LE + L+ + + A +E + S + + GI++R ++ +A
Sbjct: 63 LEEALQIGGGFQRQSLSTLLVKEAENELELSANSDDNN--GIKERTAFRLERQVAAIGRH 120
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
FL ++ S VG+ G V G+M F IA + N+ V PGI E+L++ +GL
Sbjct: 121 AGRGNGFLATIGSIAPFVGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGIAEALLATAIGL 180
Query: 187 CVSIPSSIAYNKF 199
+IP+ + YN F
Sbjct: 181 VAAIPAVVIYNVF 193
>gi|270263128|ref|ZP_06191398.1| TonB-system energizer ExbB type-1 [Serratia odorifera 4Rx13]
gi|270042816|gb|EFA15910.1| TonB-system energizer ExbB type-1 [Serratia odorifera 4Rx13]
Length = 323
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 98/193 (50%), Gaps = 4/193 (2%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
MD+S++ ++ + VK ++ L + SI++W+++ K +R+ R + + ++
Sbjct: 87 MDLSVWGMYQHADIVVKMVMIGLVLASIVTWTILFSKGSELFRAKRRLRREQLALANVRT 146
Query: 69 LETVCKSLKNHHNIGLAAIFMS-AMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
L+ + ++ ++ + ++ A +E + S + + GI++R ++ +A
Sbjct: 147 LDEASELAQHFSEESISVVLLNDAQNELELSAESNDNN--GIKERTGFRLERRVAGYSRN 204
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
+ FL ++ + VG+ G V G+M F IA + N+ V PGI E+L++ LGL
Sbjct: 205 MGRGNGFLATIGAISPFVGLFGTVWGIMNSFIGIAHSQTTNLAVVAPGIAEALLATALGL 264
Query: 187 CVSIPSSIAYNKF 199
+IP+ + YN F
Sbjct: 265 VAAIPAVVIYNVF 277
>gi|326560191|gb|EGE10579.1| MotA/TolQ/ExbB proton channel [Moraxella catarrhalis 7169]
gi|326570298|gb|EGE20343.1| MotA/TolQ/ExbB proton channel [Moraxella catarrhalis BC8]
Length = 229
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 89/197 (45%), Gaps = 1/197 (0%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
IS+ +L ++ + VK ++ +L + S +SW +I + + FE+ FW+
Sbjct: 5 ISLISLVIEASVVVKLVMAILLLLSTISWVLIFHLGTKIGGIAKFDERFERWFWTDDIDH 64
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
+ GL IF + + + S ++R + +A+ E + +
Sbjct: 65 QLSVVQAESERAGLELIFYTGFYDQNHQDQDSSLSDDKKVQIVERRLRMALGSEQVHLEK 124
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCVS 189
LS L ++ S +G+ G V G+M F + S + ++ P I E+LI+ LGL +
Sbjct: 125 GLSTLATIGSVSPYIGLFGTVWGIMNAFIGLGQAESVGLATVAPSIAEALIATALGLFAA 184
Query: 190 IPSSIAYNKFIEDSKKF 206
IP+++AYN F S
Sbjct: 185 IPATMAYNHFATKSNTL 201
>gi|312171024|emb|CBX79283.1| Biopolymer transport exbB protein [Erwinia amylovora ATCC BAA-2158]
Length = 244
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 95/193 (49%), Gaps = 4/193 (2%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
MD+S++ ++ + VK ++ L + S+ +W++ KS+ + R++ + + + +S
Sbjct: 8 MDLSVWGMYQHADIVVKAVMIGLLLASVATWAIFFSKSIELRSARKRLKREQLSLAAARS 67
Query: 69 LETVCKSLKNHHNIGLAAIFMS-AMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
LE + L+ + + A +E + S + + GI++R ++ +A
Sbjct: 68 LEEALQIGGGFQRQSLSTLLVKEAENELELSANSDDNN--GIKERTAFRLERRVAAIGRH 125
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
FL ++ S VG+ G V G+M F IA + N+ V PGI E+L++ +GL
Sbjct: 126 AGRGNGFLATIGSIAPFVGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGIAEALLATAIGL 185
Query: 187 CVSIPSSIAYNKF 199
+IP+ + YN F
Sbjct: 186 VAAIPAVVIYNVF 198
>gi|262199187|ref|YP_003270396.1| MotA/TolQ/ExbB proton channel [Haliangium ochraceum DSM 14365]
gi|262082534|gb|ACY18503.1| MotA/TolQ/ExbB proton channel [Haliangium ochraceum DSM 14365]
Length = 227
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 111/228 (48%), Gaps = 16/228 (7%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRR------QFREFEQL 62
MD+S+ ++ MGL VK + + SI + I++ FI R+ F +
Sbjct: 1 MDMSLTEMWESMGLLVKLNTIFMLVMSIAMVYIAIER---FIVYRKAATQNFSFVTALKD 57
Query: 63 FWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCD---KGARSPIG---IQDRIDRM 116
+ + + L+ K+ H + +A + + ++K + + +G + D ++R
Sbjct: 58 YLAKRRLDDARKAADRHKDSPVATVVGQGLEAYQKGREAQKEAGPDDVGDFDLVDSVNRA 117
Query: 117 MDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII 176
++ RE+ + + L+ L +++S VG+ G VLG++ F+ + G V+ PGI
Sbjct: 118 LERVKEREVSSLRKGLNVLATVASIAPFVGLFGTVLGIINAFELLKGGGGMEVIG-PGIA 176
Query: 177 ESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
E+L+S GL V+IP++I +N + + ++ + ++EF + R+
Sbjct: 177 EALVSTAFGLLVAIPAAILFNFYTGRVETMSVDINDVSSEFMDYVLRE 224
>gi|302189232|ref|ZP_07265905.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. syringae
642]
Length = 320
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 104/226 (46%), Gaps = 5/226 (2%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N+ G+A D+S + ++ + VK ++ L I SI++W++ I K + +R+ R
Sbjct: 80 NSLGMA-HDLSPWGMYQNADVVVKAVMIGLAIASIITWTIWISKGFELLGAKRRLRGEIV 138
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
+SL + + + A+ E + S + R GI++R+ ++ +
Sbjct: 139 NLKKARSLTEASATASKEGTLA-HLLVHDALEEMRLSANSRERE--GIKERVSFRLERLV 195
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLI 180
A ++ L ++ S VG+ G V G+M F IA + N+ V PGI E+L+
Sbjct: 196 AACGRNMSMGTGVLATIGSTAPFVGLFGTVWGIMNSFIGIAKTQTTNLAVVAPGIAEALL 255
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+ LGL +IP+ + YN F + Q+ + ++SR +
Sbjct: 256 ATALGLVAAIPAVVIYNVFARSIAGYKAQVSDASAHVLLLVSRDLD 301
>gi|73541923|ref|YP_296443.1| MotA/TolQ/ExbB proton channel [Ralstonia eutropha JMP134]
gi|72119336|gb|AAZ61599.1| MotA/TolQ/ExbB proton channel [Ralstonia eutropha JMP134]
Length = 242
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 99/218 (45%), Gaps = 9/218 (4%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
+ D+ + L+ Q ++ +L I S+LSW VI+ K+ + I L++ E+ FW
Sbjct: 1 MQDLGLSHLWSQGDFVMRATAIILLIMSLLSWIVILTKAWDLIRLKKMAHGAEKRFWHSD 60
Query: 68 SLETVCKSL--KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
+ ++L + + AI ++ ++ + I D + R + +I +
Sbjct: 61 DFDHALETLGSNDANPFRTLAIAGKEAAQHHRASQPQLHDVMDISDWLTRSLKSSIDDAV 120
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII----ESLIS 181
+ L+ L S+ S VG+ G V G+ + ++ G ++ V +I + E+LI
Sbjct: 121 AHMQSGLAVLASVGSTAPFVGLFGTVWGI---YHALIGIGASGVPTIDKVAGPVGEALIM 177
Query: 182 ILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
GL V+IP+ + YN +K ++ FA++ A
Sbjct: 178 TAFGLAVAIPAVLGYNALTRGNKSVISKLNRFAHDLHA 215
>gi|304396830|ref|ZP_07378710.1| tonB-system energizer ExbB [Pantoea sp. aB]
gi|304355626|gb|EFM19993.1| tonB-system energizer ExbB [Pantoea sp. aB]
Length = 246
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 92/195 (47%), Gaps = 10/195 (5%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S++ ++ + VK ++ L + S+++W++ K +R+ + + +SL
Sbjct: 10 DLSVWGMYQHADIVVKVVMIGLLLASVVTWAIFFGKYAELSAAKRRLKREQLALGEARSL 69
Query: 70 ET---VCKSLKNH-HNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
+ +S H H++ + A +E + S G GI+DR ++ +A
Sbjct: 70 NDAARIAQSFTGHSHSV---VLLNDAQNELELSA--GVEDTNGIKDRTSFRLERRVAAFS 124
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILL 184
FL ++ S +G+ G V G+M F IA + N+ V PGI E+L++ +
Sbjct: 125 RHAGRGNGFLATIGSVAPFIGLFGTVWGIMNSFIGIAKTQTTNLAVVAPGIAEALLATAV 184
Query: 185 GLCVSIPSSIAYNKF 199
GL +IP+ + YN F
Sbjct: 185 GLVAAIPAVVIYNVF 199
>gi|85714773|ref|ZP_01045759.1| MotA/TolQ/ExbB proton channel [Nitrobacter sp. Nb-311A]
gi|85698259|gb|EAQ36130.1| MotA/TolQ/ExbB proton channel [Nitrobacter sp. Nb-311A]
Length = 360
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 95/198 (47%), Gaps = 4/198 (2%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
++S +++F+ + VK ++ L S+++W++ I K V RR + +SL
Sbjct: 133 ELSPWSMFLSADIIVKLVMIGLAFASLVTWTICIAKMVELSLARRNLGTALREISESRSL 192
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+L + LA++ SAM E + S G S GI++R + E +
Sbjct: 193 AEAQMALGARDGV-LASLLASAMHEARLSA--GISSDAGIKERAASSFAEIVRAESRRVR 249
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCV 188
+ L ++ + VG+ G V G+M F I+ + N+ V PGI E+L++ LGL
Sbjct: 250 LGMGLLATIGATSPFVGLFGTVWGIMNSFIGISKAQTTNLAVVAPGIAEALLATALGLVA 309
Query: 189 SIPSSIAYNKFIEDSKKF 206
+IP+ I YN F +K +
Sbjct: 310 AIPAVIIYNHFARVTKGY 327
>gi|28867309|ref|NP_789928.1| TonB system transport protein ExbB [Pseudomonas syringae pv. tomato
str. DC3000]
gi|213970702|ref|ZP_03398827.1| TonB system transport protein ExbB [Pseudomonas syringae pv. tomato
T1]
gi|301382589|ref|ZP_07231007.1| TonB system transport protein ExbB [Pseudomonas syringae pv. tomato
Max13]
gi|302063044|ref|ZP_07254585.1| TonB system transport protein ExbB [Pseudomonas syringae pv. tomato
K40]
gi|302133608|ref|ZP_07259598.1| TonB system transport protein ExbB [Pseudomonas syringae pv. tomato
NCPPB 1108]
gi|28850543|gb|AAO53623.1| TonB system transport protein ExbB [Pseudomonas syringae pv. tomato
str. DC3000]
gi|213924536|gb|EEB58106.1| TonB system transport protein ExbB [Pseudomonas syringae pv. tomato
T1]
Length = 318
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 104/226 (46%), Gaps = 5/226 (2%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N+ G+A D+S + ++ + VK ++ L I SI++W++ I K + +R+ R
Sbjct: 78 NSLGMA-HDLSPWGMYQNADIVVKIVMIGLAIASIITWTIWISKGFELLGAKRRLRGEIV 136
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
+SL + + + A+ E + S + R GI++R+ ++ +
Sbjct: 137 NLKKARSLTEASATASKEGTLA-HLLVHDALEEMRLSANSRERE--GIKERVSFRLERLV 193
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLI 180
A ++ L ++ S VG+ G V G+M F IA + N+ V PGI E+L+
Sbjct: 194 AACGRNMSMGTGVLATIGSTAPFVGLFGTVWGIMNSFIGIAKTQTTNLAVVAPGIAEALL 253
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+ LGL +IP+ + YN F + Q+ + ++SR +
Sbjct: 254 ATALGLVAAIPAVVIYNVFARSIAGYKAQVSDASAHVLLLVSRDLD 299
>gi|92117068|ref|YP_576797.1| MotA/TolQ/ExbB proton channel [Nitrobacter hamburgensis X14]
gi|91799962|gb|ABE62337.1| outer membrane transport energization protein ExbB [Nitrobacter
hamburgensis X14]
Length = 337
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 96/200 (48%), Gaps = 4/200 (2%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
+ D+S +++F+ + VK ++ L S+++W++ I K + +R R +
Sbjct: 105 LHDLSPWSMFLTADILVKFVMIGLAFASLVTWTICIAKMIELSLAQRALRAALTTISESR 164
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
SL +L + LA++ +AM E + S G S GI++R + E
Sbjct: 165 SLAEAQMALGAKDGV-LASLLAAAMREARLSA--GISSDAGIKERAASNFAEIVRAESRR 221
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
I + L ++ + VG+ G V G+M F I+ + N+ V PGI E+L++ LGL
Sbjct: 222 IRLGMGLLATIGATSPFVGLFGTVWGIMNSFIGISKAQTTNLAVVAPGIAEALLATALGL 281
Query: 187 CVSIPSSIAYNKFIEDSKKF 206
+IP+ I YN F +K +
Sbjct: 282 VAAIPAVIIYNHFARVTKGY 301
>gi|71735760|ref|YP_272498.1| TonB system transport protein ExbB1 [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|71556313|gb|AAZ35524.1| TonB system transport protein ExbB1 [Pseudomonas syringae pv.
phaseolicola 1448A]
Length = 314
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 104/226 (46%), Gaps = 5/226 (2%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N+ G+A D+S + ++ + VK ++ L I SI++W++ I K + +R+ R
Sbjct: 74 NSLGMA-HDLSPWGMYQNAEVVVKAVMIGLAIASIITWTIWISKGFELLGAKRRLRGEIV 132
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
+SL + + + A+ E + S + R GI++R+ ++ +
Sbjct: 133 NLKKARSLNEASSTASKEGTLA-HLLVHDALEEMRLSANSRERE--GIKERVSFRLERLV 189
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLI 180
A ++ L ++ S VG+ G V G+M F IA + N+ V PGI E+L+
Sbjct: 190 AACGRNMSMGTGVLATIGSTAPFVGLFGTVWGIMNSFIGIAKTQTTNLAVVAPGIAEALL 249
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+ LGL +IP+ + YN F + Q+ + ++SR +
Sbjct: 250 ATALGLVAAIPAVVIYNVFARSIAGYKAQVSDASAHVLLLVSRDLD 295
>gi|226943196|ref|YP_002798269.1| tonB-system proton channel, ExbB [Azotobacter vinelandii DJ]
gi|226718123|gb|ACO77294.1| tonB-system proton channel, ExbB [Azotobacter vinelandii DJ]
Length = 359
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 107/221 (48%), Gaps = 5/221 (2%)
Query: 5 GLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFW 64
GLA D+S + ++ + VK ++ L + S+++W++ + K + + RR+ +
Sbjct: 122 GLA-HDLSPWGMYQNADIVVKGVMIGLLLASVVTWTIWMAKGLELLGARRRLQRSLADIK 180
Query: 65 SGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARE 124
++L+ +L + N A + A E + S G GI++R+ ++ +A
Sbjct: 181 GLRTLDQ-ASALPSGENCLRAKLIADAREELQLSA--GTIDKDGIKERVSFRLERLVAEC 237
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISIL 183
+++ L ++ S VG+ G V G+M F IA + N+ V PGI E+L++
Sbjct: 238 GRKMSVGTGVLATIGSTSPFVGLFGTVWGIMNSFIGIAKSQTTNLAVVAPGIAEALLATA 297
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+GL +IP+ I YN F + Q+ ++E ++SR
Sbjct: 298 IGLVAAIPAVIIYNVFARSIAAYKAQVANLSSEVLLLVSRD 338
>gi|254247706|ref|ZP_04941027.1| MotA/TolQ/ExbB proton channel [Burkholderia cenocepacia PC184]
gi|124872482|gb|EAY64198.1| MotA/TolQ/ExbB proton channel [Burkholderia cenocepacia PC184]
Length = 219
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 88/200 (44%), Gaps = 19/200 (9%)
Query: 33 IFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAA------ 86
+ S+LSW VI+ K N I L R + EQ FW + + K L GLAA
Sbjct: 1 MMSVLSWIVIVIKGWNVIRLNRLTKNAEQAFWHSDNFDDGIKKL------GLAASTPNDN 54
Query: 87 IFMSAMSEWKKSCDKGARSPIGIQDRID------RMMDVAIARELEEITEKLSFLGSMSS 140
F++ K++ D ++ + DR+D R + + + + L+ L S+ S
Sbjct: 55 PFLALALSGKEAADHHHQTQPHLHDRMDVSDWVTRCLKDTMDEGISRMQSGLAILASVGS 114
Query: 141 AGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCVSIPSSIAYNKF 199
VG+ G V G+ +I ++ + G + ESLI GL V+IP+ + YN
Sbjct: 115 TAPFVGLFGTVWGIYHALLAIGATGQTSIDQVAGPVGESLIMTAFGLFVAIPAVLGYNAL 174
Query: 200 IEDSKKFAMQMEGFANEFSA 219
+K ++ FA+ A
Sbjct: 175 TRANKGVVSKLRRFAHGLHA 194
>gi|146338971|ref|YP_001204019.1| biopolymer transport protein ExbB [Bradyrhizobium sp. ORS278]
gi|146191777|emb|CAL75782.1| biopolymer transport protein ExbB; uptake of enterobactin,
tonB-dependent uptake of B colicins [Bradyrhizobium sp.
ORS278]
Length = 271
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 104/205 (50%), Gaps = 21/205 (10%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+S +++FMQ + VK ++ L + S+ +W+V++ K+ I LR R + +
Sbjct: 30 LSPWSMFMQADIVVKAVMIGLALSSVATWTVLVVKA---IQLRSALRTARRALGAA---- 82
Query: 71 TVCKSLKNHHNIGLAA---IFMSAMSEWKKSCDKGARSPI-GIQDRI----DRMMDVAIA 122
TV +SL + G++A + ++ + DK P GI++R+ +R+ A+A
Sbjct: 83 TVARSLLDATG-GVSADGGVVGRLLAVAEDEIDKSRGLPADGIKERVSWQFERIEAAAVA 141
Query: 123 RELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLIS 181
R I + L ++ + G VG+ G V G+M F I+ ++ N+ V PGI E+L++
Sbjct: 142 R----IGRGIGILATVGAVGPFVGLFGTVWGIMNSFIGISHAHTTNLAVVAPGIAEALLA 197
Query: 182 ILLGLCVSIPSSIAYNKFIEDSKKF 206
GL +IP+ + YN F + +
Sbjct: 198 TAFGLAAAIPAVVIYNLFARATSGY 222
>gi|330876516|gb|EGH10665.1| TonB system transport protein ExbB [Pseudomonas syringae pv.
morsprunorum str. M302280PT]
gi|331018570|gb|EGH98626.1| TonB system transport protein ExbB [Pseudomonas syringae pv.
lachrymans str. M302278PT]
Length = 318
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 104/226 (46%), Gaps = 5/226 (2%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N+ G+A D+S + ++ + VK ++ L I SI++W++ I K + +R+ R
Sbjct: 78 NSLGMA-HDLSPWGMYQNADIVVKIVMIGLAIASIITWTIWISKGFELLGAKRRLRGEIV 136
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
+SL + + + A+ E + S + R GI++R+ ++ +
Sbjct: 137 NLKKARSLTEASATASKEGTLA-HLLVHDALEEMRLSANSRERE--GIKERVSFRLERLV 193
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLI 180
A ++ L ++ S VG+ G V G+M F IA + N+ V PGI E+L+
Sbjct: 194 AACGRNMSMGTGVLATIGSTAPFVGLFGTVWGIMNSFIGIAKTQTTNLAVVAPGIAEALL 253
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+ LGL +IP+ + YN F + Q+ + ++SR +
Sbjct: 254 ATALGLVAAIPAVVIYNVFARSIAGYKAQVSDASAHVLLLVSRDLD 299
>gi|261346411|ref|ZP_05974055.1| TonB system transport protein ExbB [Providencia rustigianii DSM
4541]
gi|282565393|gb|EFB70928.1| TonB system transport protein ExbB [Providencia rustigianii DSM
4541]
Length = 314
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 101/216 (46%), Gaps = 2/216 (0%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S++ ++ + VK ++ L + S+++W++ + K + RR+ + + +SL
Sbjct: 91 DLSVWGMYQNADVVVKTVMIGLLLASVITWALFLSKGTEILIARRRLKYEAKAIAEAKSL 150
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+ S+ G + A + +K + GI+DR ++ A+A +
Sbjct: 151 DEAV-SIAEGFKSGSITRMLLAEATTEKVLSANSNDLSGIKDRTGFRLERAVAAISRYMG 209
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCV 188
+L ++ + VG+ G V G+M F IA + N+ V PGI E+L++ +GL
Sbjct: 210 RGNGYLATIGAISPFVGLFGTVWGIMNSFIGIAHSQTTNLAVVAPGIAEALLATAIGLIA 269
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+IP+ + YN F + Q+ A + + +L R
Sbjct: 270 AIPAVVIYNIFARMINNYRGQVGDVAAQAALLLGRD 305
>gi|330960511|gb|EGH60771.1| TonB system transport protein ExbB [Pseudomonas syringae pv.
maculicola str. ES4326]
Length = 228
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 94/190 (49%), Gaps = 10/190 (5%)
Query: 30 LLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIG-LAAIF 88
+L +FS+ +W+V++ K+ L+ Q + + + FW+ Q +T +S + LA +
Sbjct: 16 ILLLFSLATWAVLLLKAWQQGRLKSQNKRYTEAFWAAQDFDTALRSAPQKSQLARLAQVT 75
Query: 89 MSAMS---EWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLV 145
A+S + + D +R Q+ ++R + I E + + L S+ S +
Sbjct: 76 TKALSSSQDGHEPVDSWSR-----QELLERSLHQQIHCERRSLESGMIVLASIGSTAPFI 130
Query: 146 GILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCVSIPSSIAYNKFIEDSK 204
G+ G V G++ Q+I+ S ++ + G I E+LI+ +G+ V++P+ +AYN K
Sbjct: 131 GLFGTVFGIIHALQAISTAKSASIAVVAGPIGEALIATGIGIAVAVPAVLAYNFCGRRLK 190
Query: 205 KFAMQMEGFA 214
M+ FA
Sbjct: 191 LMVADMDAFA 200
>gi|307822092|ref|ZP_07652324.1| MotA/TolQ/ExbB proton channel [Methylobacter tundripaludum SV96]
gi|307736658|gb|EFO07503.1| MotA/TolQ/ExbB proton channel [Methylobacter tundripaludum SV96]
Length = 262
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 103/236 (43%), Gaps = 35/236 (14%)
Query: 17 FMQMGLAVK-CIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL------ 69
F+ G AV + +L SI SW++++ K++ LR F + FW S
Sbjct: 12 FISQGGAVSIAVAAMLLAMSIGSWTLMVIKAIQARRLRSNSARFLERFWQASSTTLSSMV 71
Query: 70 ----ETVCKS-------------LKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDR 112
E + K+ NHH A +F +E + ++G S + R
Sbjct: 72 TVMSEDLNKAENPFARLAIQGINAANHHKRYTAQLF----AEHAVTANEGGSSALQEHSR 127
Query: 113 IDRMMDVAIAR----ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA--GYYS 166
D + A+ R E + L+ L S+ S +G+ G V G+ +IA G S
Sbjct: 128 HDEFIAQALRRVIGQEAMHLETGLTLLASVGSIAPFIGLFGTVWGIYHALGAIAVGGQAS 187
Query: 167 NNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
+ V+ P + E+LI GL V+IP+ +AYN + D++ Q+E FA++ L+
Sbjct: 188 VDKVAGP-VGEALIMTAFGLAVAIPAVLAYNALVRDNRLLMGQLETFAHDLHTYLT 242
>gi|330964243|gb|EGH64503.1| TonB system transport protein ExbB [Pseudomonas syringae pv.
actinidiae str. M302091]
Length = 318
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 104/226 (46%), Gaps = 5/226 (2%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N+ G+A D+S + ++ + VK ++ L I SI++W++ I K + +R+ R
Sbjct: 78 NSLGMA-HDLSPWGMYQNADIVVKIVMIGLAIASIITWTIWISKGFELLGAKRRLRGEIV 136
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
+SL + + + A+ E + S + R GI++R+ ++ +
Sbjct: 137 NLKKARSLTEASATASKEGTLA-HLLVHDALEEMRLSANSRERE--GIKERVSFRLERLV 193
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLI 180
A ++ L ++ S VG+ G V G+M F IA + N+ V PGI E+L+
Sbjct: 194 AACGRNMSMGTGVLATIGSTAPFVGLFGTVWGIMNSFIGIAKTQTTNLAVVAPGIAEALL 253
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+ LGL +IP+ + YN F + Q+ + ++SR +
Sbjct: 254 ATALGLVAAIPAVVIYNVFARSIAGYKAQVSDASAHVLLLVSRDLD 299
>gi|319760467|ref|YP_004124405.1| protein TolQ [Candidatus Blochmannia vafer str. BVAF]
gi|318039181|gb|ADV33731.1| protein TolQ [Candidatus Blochmannia vafer str. BVAF]
Length = 256
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 104/222 (46%), Gaps = 8/222 (3%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
++IF LF + + V+ LL IFSI+SWS+I + +R+ + FE FW+G L
Sbjct: 1 MNIFDLFFKTNMLVQFTTLLLIIFSIISWSIIFNRIFILKKEQRKLKLFEDRFWAGIELS 60
Query: 71 TVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ K + N N IF E+ K P + +R +M + ELE +
Sbjct: 61 NLYKEISNRRNRLNSSERIFFVGFKEFSKLYHIKNHLPEVVTNRTLCVMHNIMNIELEML 120
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV------VSIPGIIESLISI 182
+ + +G + S +G+ G VLG++ F + + + + PG+ E+LIS
Sbjct: 121 EKNVPLIGIIGSISPYIGLFGTVLGIIHVFLELGKITTEHTGGTHIQLIAPGVAEALIST 180
Query: 183 LLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+GL V+IP+ +A+N + F EF AIL RQ
Sbjct: 181 AIGLFVAIPAVMAFNYLTIQINTLSQSYNNFIEEFIAILYRQ 222
>gi|260599390|ref|YP_003211961.1| biopolymer transport protein ExbB [Cronobacter turicensis z3032]
gi|260218567|emb|CBA33808.1| Biopolymer transport protein exbB [Cronobacter turicensis z3032]
Length = 239
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 94/191 (49%), Gaps = 2/191 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S++ ++ + VK ++ L + S+++W++ KSV +R+ + +Q ++L
Sbjct: 4 DLSVWGMYQHADIVVKIVMIGLILASVVTWAIFFSKSVELSGHKRRLKREQQELAGARTL 63
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+ + + L+A + ++ ++ G GI++R ++ +A +
Sbjct: 64 DDAREMAERFGPKSLSARLIEE-AQNERELSAGCEDNEGIKERTGFRLERRVAAAGRHMG 122
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCV 188
+L ++ + VG+ G V G+M F IA + N+ V PGI E+L++ +GL
Sbjct: 123 RGNGYLATIGAISPFVGLFGTVWGIMNSFIGIAQSQTTNLAVVAPGIAEALLATAIGLIA 182
Query: 189 SIPSSIAYNKF 199
+IP+ + YN F
Sbjct: 183 AIPAVVIYNIF 193
>gi|149924036|ref|ZP_01912419.1| MotA/TolQ/ExbB proton channel [Plesiocystis pacifica SIR-1]
gi|149815119|gb|EDM74672.1| MotA/TolQ/ExbB proton channel [Plesiocystis pacifica SIR-1]
Length = 240
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 111/224 (49%), Gaps = 24/224 (10%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQK----------SVNFITLRRQFREF 59
D S+ ++ QMG+ K ++ +L I +++ + I++ S+++I + R F
Sbjct: 13 DFSLSGMWAQMGIFAKLVLIVLIIQFVITLIMSIERLMVYNKAKSQSISYIMMLRNF--- 69
Query: 60 EQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCD---KGARSPIG---IQDRI 113
+ + LE ++K H + +A + S M E+ + + + +G I D +
Sbjct: 70 ----LNERKLEDAVAAVKQHSSSPVAKVVGSGMDEYLQGLEALQEEGPDDVGDFDIVDAV 125
Query: 114 DRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP 173
+R M+ RE + + L+ + + S VG+LG V+G++ FQ ++ + S+
Sbjct: 126 NRQMERTKERETANLKKGLALVATTGSTAPFVGLLGTVVGIINSFQGLSSDGGGGLSSVA 185
Query: 174 -GIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANE 216
GI E+L++ +GL V+IP+ +A+N F + F + M A+E
Sbjct: 186 GGISEALVATAVGLIVAIPAVMAFNYFNSRVEGFQIDMNDVASE 229
>gi|330880022|gb|EGH14171.1| TonB system transport protein ExbB [Pseudomonas syringae pv.
glycinea str. race 4]
Length = 210
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 93/190 (48%), Gaps = 10/190 (5%)
Query: 30 LLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIG-LAAIF 88
+L +FS+ +W+V++ K+ L+ Q + + Q FW+ + + S + LA +
Sbjct: 16 ILLLFSLATWAVLLLKAWQQGRLKNQNKRYTQAFWAAKDFDAALHSGPQKSQLARLAQVT 75
Query: 89 MSAMS---EWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLV 145
A+S + + D +R Q+ ++R + I E + + L S+ S +
Sbjct: 76 TQALSGGQDGHEPADSWSR-----QELLERSLHQQIHSERRNLESGMIVLASIGSTAPFI 130
Query: 146 GILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCVSIPSSIAYNKFIEDSK 204
G+ G V G++ Q+I+ S ++ + G I E+LI+ +G+ V++P+ +AYN F K
Sbjct: 131 GLFGTVFGIIHALQAISTAKSASIAVVAGPIGEALIATGIGIAVAVPAVLAYNFFNRRLK 190
Query: 205 KFAMQMEGFA 214
++ FA
Sbjct: 191 LMVADLDAFA 200
>gi|94967180|ref|YP_589228.1| MotA/TolQ/ExbB proton channel [Candidatus Koribacter versatilis
Ellin345]
gi|94549230|gb|ABF39154.1| outer membrane transport energization protein ExbB [Candidatus
Koribacter versatilis Ellin345]
Length = 251
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 107/211 (50%), Gaps = 13/211 (6%)
Query: 15 ALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG-------Q 67
+L+ QMG+ K ++ +LFI S S V+I +++ F R+Q R F +
Sbjct: 34 SLWKQMGILAKIVVIILFIMSGWSIGVMIDRALAFSAARKQSRAFAPAVAGALREGKIDE 93
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
++ ++ K+H LA + + + E+K + A P + R ++ A A E
Sbjct: 94 AIRVAERNKKSH----LAKVVTAGLQEFKAHGES-ADIPGEQIEASKRALERAEAIVHAE 148
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISILLGL 186
+ LS L ++ + VG+ G V+G++ F+SI+ + + ++ GI E+L++ +GL
Sbjct: 149 LKRGLSGLATIGATAPFVGLFGTVVGILNAFRSISQNKATGLGAVAGGISEALVTTAIGL 208
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEF 217
V+IP+ + +N F + F ++M+ ++E
Sbjct: 209 FVAIPAVMMFNYFTGKVEAFDVEMDNSSSEL 239
>gi|295701103|ref|YP_003608996.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. CCGE1002]
gi|295440316|gb|ADG19485.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. CCGE1002]
Length = 256
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 97/227 (42%), Gaps = 16/227 (7%)
Query: 1 MNNYGLA-IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREF 59
M +YGLA + D F + I+ +L I S+LSW+V+I K I LRR +
Sbjct: 1 MQHYGLANVWDSGDFV--------TRGILGVLVIMSVLSWTVLIVKLWQVIRLRRVTSQS 52
Query: 60 EQLFWSGQSLETVCKSL-----KNHHNIGLA-AIFMSAMSEWKKSCDKGARSPIGIQDRI 113
+ FWS + +L H N LA A+ + + + I + D I
Sbjct: 53 DARFWSADRFDDGLHALGYPDSSAHDNPLLALALAGHEAATHHRQTQQQLHDRIDVSDWI 112
Query: 114 DRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP 173
R + + + + L+ L S+ S VG+ G V G+ I ++ +
Sbjct: 113 TRRLQDTMDETIARLQSGLAILASIGSTAPFVGLFGTVWGIYHALIVIGETGQTSIDHVA 172
Query: 174 GII-ESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
G + ESLI GL V+IP+ + YN ++ +++ FA+ A
Sbjct: 173 GPVGESLIMTAFGLFVAIPAVLGYNGLTRANRSIVARLKRFAHGLHA 219
>gi|308188108|ref|YP_003932239.1| Biopolymer transport exbB protein [Pantoea vagans C9-1]
gi|308058618|gb|ADO10790.1| Biopolymer transport exbB protein [Pantoea vagans C9-1]
Length = 240
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 92/195 (47%), Gaps = 10/195 (5%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S++ ++ + VK ++ L + S+++W++ K +R+ + + ++L
Sbjct: 4 DLSVWGMYQHADIVVKVVMIGLLLASVVTWAIFFGKYAELSAAKRRLKREQLALGEARNL 63
Query: 70 ET---VCKSLKNH-HNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
+ K+ H H++ + A +E + S G GI+DR ++ +A
Sbjct: 64 NDAARIAKAFTGHSHSV---VLLNDAQNELELSA--GVEDTNGIKDRTSFRLERRVAAFS 118
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILL 184
FL ++ S +G+ G V G+M F IA + N+ V PGI E+L++ +
Sbjct: 119 RHAGRGNGFLATIGSVAPFIGLFGTVWGIMNSFIGIAKTQTTNLAVVAPGIAEALLATAI 178
Query: 185 GLCVSIPSSIAYNKF 199
GL +IP+ + YN F
Sbjct: 179 GLVAAIPAVVIYNVF 193
>gi|71737513|ref|YP_275035.1| TonB system transport protein ExbB [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|71558066|gb|AAZ37277.1| TonB system transport protein ExbB [Pseudomonas syringae pv.
phaseolicola 1448A]
Length = 228
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 93/190 (48%), Gaps = 10/190 (5%)
Query: 30 LLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIG-LAAIF 88
+L +FS+ +W+V++ K+ L+ Q + + Q FW+ + + S + LA +
Sbjct: 16 ILLLFSLATWAVLLLKAWQQGRLKNQNKRYTQAFWAAKDFDAALHSGPQKSQLARLAQVT 75
Query: 89 MSAMS---EWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLV 145
A+S + + D +R Q+ ++R + I E + + L S+ S +
Sbjct: 76 TQALSGGQDGHEPADSWSR-----QELLERSLHQQIHSERRNLESGMIVLASIGSTAPFI 130
Query: 146 GILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCVSIPSSIAYNKFIEDSK 204
G+ G V G++ Q+I+ S ++ + G I E+LI+ +G+ V++P+ +AYN F K
Sbjct: 131 GLFGTVFGIIHALQAISTAKSASIAVVAGPIGEALIATGIGIAVAVPAVLAYNFFNRRLK 190
Query: 205 KFAMQMEGFA 214
++ FA
Sbjct: 191 LMVADLDAFA 200
>gi|90423486|ref|YP_531856.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris BisB18]
gi|90105500|gb|ABD87537.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris BisB18]
Length = 288
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 102/220 (46%), Gaps = 6/220 (2%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S +A+F+ VK +I L + S+ +W+V + K V + +R+ R + SL
Sbjct: 50 DLSPWAMFLAADNIVKAVIVGLALASLATWTVWLVKIVELTSAKRRARSAVRKLQRADSL 109
Query: 70 ETVCKSLKNH--HNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + + +A + +A+ E ++S D A G+++R+ + A +
Sbjct: 110 VQARQQIDADWTRDGPVADLAQAALRETERSNDLSAE---GVKERLAIALSRIEAEAGRD 166
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
+ L ++ + +G+ G V G+M F IA + N+ V PGI E+L++ +GL
Sbjct: 167 MARGTGLLATIGATAPFIGLFGTVWGIMNSFVGIAQTKTTNLAVVAPGIAEALLATAIGL 226
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ I YN F + + + E LSR E
Sbjct: 227 VAAIPAVIIYNVFARAIAGYRALLSDASGEVLQHLSRDLE 266
>gi|225873732|ref|YP_002755191.1| transporter, MotA/TolQ/ExbB proton channel family [Acidobacterium
capsulatum ATCC 51196]
gi|225791727|gb|ACO31817.1| transporter, MotA/TolQ/ExbB proton channel family [Acidobacterium
capsulatum ATCC 51196]
Length = 247
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 104/220 (47%), Gaps = 6/220 (2%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG---QS 68
S+ ++ QMG K ++ +LFI SI S +V+I + + F R+Q REF
Sbjct: 28 SLPDMWHQMGDLAKGVVFVLFIMSIWSLAVMIDRWLYFSAARKQSREFAPKVAGALREGK 87
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKG-ARSPIGIQDRIDRMMDVAIARELEE 127
L+ K + LA + + + E++ G A +P I+ R ++ A A +
Sbjct: 88 LDEAVKVADRNKKSHLAEVVTAGLQEFRNYGGGGSAVTPEQIESS-KRALERAEAIVHAK 146
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISILLGL 186
+ L L ++ S VG+ G V G++ F IA + + ++ GI E+L++ GL
Sbjct: 147 LKRGLGALATIGSTAPFVGLFGTVAGILKAFNEIATMKTPGIGAVAGGISEALVTTAFGL 206
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
V++P+ +N F + F ++M+ ++E +Q+
Sbjct: 207 LVAVPAVWTFNYFTNKVESFDVEMDNSSSELVDYFIKQSR 246
>gi|320324430|gb|EFW80508.1| TonB system transport protein ExbB [Pseudomonas syringae pv.
glycinea str. B076]
gi|320328162|gb|EFW84166.1| TonB system transport protein ExbB [Pseudomonas syringae pv.
glycinea str. race 4]
Length = 228
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 93/190 (48%), Gaps = 10/190 (5%)
Query: 30 LLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIG-LAAIF 88
+L +FS+ +W+V++ K+ L+ Q + + Q FW+ + + S + LA +
Sbjct: 16 ILLLFSLATWAVLLLKAWQQGRLKNQNKRYTQAFWAAKDFDAALHSGPQKSQLARLAQVT 75
Query: 89 MSAMS---EWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLV 145
A+S + + D +R Q+ ++R + I E + + L S+ S +
Sbjct: 76 TQALSGGQDGHEPADSWSR-----QELLERSLHQQIHSERRNLESGMIVLASIGSTAPFI 130
Query: 146 GILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCVSIPSSIAYNKFIEDSK 204
G+ G V G++ Q+I+ S ++ + G I E+LI+ +G+ V++P+ +AYN F K
Sbjct: 131 GLFGTVFGIIHALQAISTAKSASIAVVAGPIGEALIATGIGIAVAVPAVLAYNFFNRRLK 190
Query: 205 KFAMQMEGFA 214
++ FA
Sbjct: 191 LMVADLDAFA 200
>gi|238796986|ref|ZP_04640490.1| TonB complex protein [Yersinia mollaretii ATCC 43969]
gi|238719246|gb|EEQ11058.1| TonB complex protein [Yersinia mollaretii ATCC 43969]
Length = 332
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 101/197 (51%), Gaps = 5/197 (2%)
Query: 5 GLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFW 64
GLA MD+S++ ++ + VK ++ L + SI++W+++ K RR+ + ++
Sbjct: 93 GLA-MDLSVWGMYQHADVVVKGVMIGLVLASIVTWTILFSKGTELFRARRRLLQEHEVIG 151
Query: 65 SGQSLETVCKSLKNHHNIGLAAIFM-SAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAR 123
+ L+T + + ++++ + A +E S + + GI++R ++ +A
Sbjct: 152 AVTDLDTASERAEVFAPDSISSLLLREAQNERLLSAESNDNN--GIKERTAFRLERRVAA 209
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISI 182
++ + FL ++ + VG+ G V G+M F IA + N+ V PGI E+L++
Sbjct: 210 IGRQMGKGNGFLATIGAISPFVGLFGTVWGIMNSFIGIAHSQTTNLAVVAPGIAEALLAT 269
Query: 183 LLGLCVSIPSSIAYNKF 199
LGL +IP+ + YN F
Sbjct: 270 ALGLVAAIPAVVIYNIF 286
>gi|325529867|gb|EGD06707.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. TJI49]
Length = 279
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 98/203 (48%), Gaps = 11/203 (5%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFW--SGQSLETVCKSLKNH---- 79
+IT+L + +SW V+ K+ T+ + + F Q F +G+ L + +N
Sbjct: 59 VVITILLAMAAVSWVVMWSKARYVGTVDKANQFFVQRFREVAGRHLGGLAHVDENSAEGR 118
Query: 80 --HNIGLAAIFMSAMSEWKKSCDKGARSPIGIQ--DRIDRMMDVAIARELEEITEKLSFL 135
+ L ++ + + E D R+ I + + I MD + RE + +++ + L
Sbjct: 119 RLYQSSLYRLYRAGVHEIHSRVDGNGRTVITTESIEAIRASMDATLVRENQRLSKSMVLL 178
Query: 136 GSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCVSIPSSI 194
S G +G+LG V+G+M F +IA NV +I PGI +L++ + GL V+IP+
Sbjct: 179 TIAISGGPFLGLLGTVVGVMITFAAIAAAGDVNVNAIAPGIAAALLATVTGLFVAIPALF 238
Query: 195 AYNKFIEDSKKFAMQMEGFANEF 217
YN + +K M+ F +EF
Sbjct: 239 GYNYLLIRNKNVTANMQVFVDEF 261
>gi|152980817|ref|YP_001354069.1| ExbB transport protein [Janthinobacterium sp. Marseille]
gi|151280894|gb|ABR89304.1| ExbB transport protein [Janthinobacterium sp. Marseille]
Length = 591
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 105/226 (46%), Gaps = 25/226 (11%)
Query: 20 MGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRR-------QFREFEQLFWSGQSLETV 72
M L ++ LL + +LSW+++I K N+ + R FRE +G L+ +
Sbjct: 363 MPLDAWLVVILLGVMMVLSWAIMISKGRNYGAISRANAIFMDHFRET-----AGAPLDQL 417
Query: 73 CKSLKNHHNI----GLAAIFMSAMSEWKKSCDKG----ARSPIGIQDRIDRMMDVAIARE 124
S K ++ L ++ A+ E ++ D+G A S I I MD + RE
Sbjct: 418 ANSSKLPQDVKADSSLWRLYKVAVDEMRRRHDRGYDLNAVSNATIS-AIRAAMDGVMVRE 476
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFF--QSIAGYYSNNVVSIPGIIESLISI 182
E ++ ++++L + VG+ G V+G+M F ++AG N V+ PG+ +L+
Sbjct: 477 NERMSHRMNWLSTAIEGAPYVGLFGTVIGIMLVFVVAAMAGAVDINSVA-PGMAAALLCT 535
Query: 183 LLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS-RQTEG 227
GL V+IP+ YN S M F +EF+ L+ Q EG
Sbjct: 536 AAGLGVAIPALFGYNWLASRSDAIGADMAVFVDEFATRLAEEQGEG 581
>gi|222106934|ref|YP_002547725.1| tonB-system energizer ExbB [Agrobacterium vitis S4]
gi|221738113|gb|ACM39009.1| tonB-system energizer ExbB [Agrobacterium vitis S4]
Length = 341
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 99/218 (45%), Gaps = 7/218 (3%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S +FM VK ++ L + S+ +W++++ K++ + + R + +SL
Sbjct: 106 DLSPVGMFMAADWVVKSVMIALGLASVATWTILLVKTLQLSGSKARLRRGLAVLQEARSL 165
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWK---KSCDKGARSPIGIQDRIDRMMDVAIARELE 126
+L+ + + + A E K + D G+++R+ + +R
Sbjct: 166 SQAAGALQKRRGT-VPDMLLIAARELKLSEPALDYAGND--GVKERVSSALSRIESRAGR 222
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLG 185
+T L ++ S G VG+ G V G+M F I+ + N+ V PGI E+L++ +G
Sbjct: 223 RMTAGTGILATIGSIGPFVGLFGTVWGIMNSFIGISQSQTTNLAVVAPGIAEALLATAIG 282
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
L +IP+ + YN F + Q+ A ++SR
Sbjct: 283 LVAAIPAVVIYNVFARAVTGYRQQLLDAATAVERLVSR 320
>gi|85714503|ref|ZP_01045491.1| exbB, uptake of enterochelin; tonB-dependent uptake of B colicins
[Nitrobacter sp. Nb-311A]
gi|85698950|gb|EAQ36819.1| exbB, uptake of enterochelin; tonB-dependent uptake of B colicins
[Nitrobacter sp. Nb-311A]
Length = 296
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 101/195 (51%), Gaps = 12/195 (6%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLR-RQFREFEQLFWSGQS 68
+++ +FM VK ++ L + S+++WSV + K++ + R R R+ + +S
Sbjct: 70 ELTPIGMFMAADAIVKAVMIGLALASVVTWSVWLAKTIELLGARSRLLRDLHSVE-DVRS 128
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRM---MDVAIAREL 125
L+ K L+ N +A + +A E +S D A + G+++R+ + ++ A AR +
Sbjct: 129 LDEASKILQ-RSNSDIAILTNAARDEIHRSQD--AMNHDGVKERVASLFSRIEAAAARRM 185
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILL 184
T S L ++ S VG+ G V G+M F I+ + N+ V PGI E+L++ +
Sbjct: 186 ---TRGTSILATIGSTAPFVGLFGTVWGIMNAFIGISKTQTTNLAVVAPGIAEALLATAM 242
Query: 185 GLCVSIPSSIAYNKF 199
GL +IP+ + YN F
Sbjct: 243 GLVAAIPAVMIYNVF 257
>gi|238782872|ref|ZP_04626901.1| TonB complex protein [Yersinia bercovieri ATCC 43970]
gi|238716295|gb|EEQ08278.1| TonB complex protein [Yersinia bercovieri ATCC 43970]
Length = 332
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 102/197 (51%), Gaps = 5/197 (2%)
Query: 5 GLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFW 64
GLA MD+S++ ++ + VK ++ L + SI++W+++ K RR+ + ++
Sbjct: 93 GLA-MDLSVWGMYQHADVVVKGVMIGLVLASIVTWTILFSKGTELFRARRRLLQEHEVIG 151
Query: 65 SGQSLETVCKSLKNHHNIGLAAIFM-SAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAR 123
+ L+T + + + ++++ + A +E S + + GI++R ++ +A
Sbjct: 152 AVTDLDTASERAEVFASDSISSLLLREAQNERLLSAESNDNN--GIKERAAFRLERRVAA 209
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISI 182
++ + FL ++ + VG+ G V G+M F IA + N+ V PGI E+L++
Sbjct: 210 IGRQMGKGNGFLATIGAISPFVGLFGTVWGIMNSFIGIAHSQTTNLAVVAPGIAEALLAT 269
Query: 183 LLGLCVSIPSSIAYNKF 199
LGL +IP+ + YN F
Sbjct: 270 ALGLVAAIPAVVIYNIF 286
>gi|78186494|ref|YP_374537.1| ExbB/TolQ family protein [Chlorobium luteolum DSM 273]
gi|78166396|gb|ABB23494.1| Cell division and transport-associated protein TolQ [Chlorobium
luteolum DSM 273]
Length = 222
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 110/213 (51%), Gaps = 11/213 (5%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFRE---FEQLFWSGQSL 69
I AL Q G V ++ +L +FS++SW++I QK F +R+ E F F+ Q +
Sbjct: 8 ILALLSQAGPVVLFVLGILLLFSVVSWAIIFQK---FTFVRKSMLESKAFLDSFFQSQGV 64
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKK-SCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
E + +N+ + LA +F +A E++ + GA + RI R + E++ +
Sbjct: 65 ERIFAESENYRDASLAKVFRAAYIEYRALGENPGAGD---ARTRIARAVKREGNLEVKRL 121
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLC 187
++ + FL ++ + +G+ G V G+M FQ+I S ++ ++ PGI E+L++ GL
Sbjct: 122 SQLVPFLATVGNTAPFIGLFGTVWGIMDAFQNIGMVQSASLAAVAPGISEALVATAAGLA 181
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAI 220
+IP+ + YN +E F+ EF+A+
Sbjct: 182 AAIPAVMGYNYLSLQVGIIERDIEEFSPEFTAV 214
>gi|38327066|gb|AAR17605.1| ExbB [Photorhabdus temperata subsp. temperata]
Length = 344
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 101/194 (52%), Gaps = 8/194 (4%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+SI+ ++ + VK ++ L I S+++W++ K V + R+ R+ + +SL
Sbjct: 121 DLSIWGMYKNADIVVKTVMVGLVIASVITWALFFSKGVELLAAGRRLRKEQLALAEVKSL 180
Query: 70 ETVCKSLKNHHNIGLAAIFMS-AMSEWKKSCDKGARSPIG--IQDRIDRMMDVAIARELE 126
+ + + + ++ + +S A +E + S + + I + R++R + AI+R +
Sbjct: 181 DQAAEIAEGFSKLSISRLLLSEAQAERQLSSESTDLNSIKERVSFRLERSV-AAISRHMG 239
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLG 185
L+ +G++S VG+ G V G+M F IA + N+ V PGI E+L++ LG
Sbjct: 240 RGNGYLATIGAISP---FVGLFGTVWGIMNSFIGIAHSQTTNLAVVAPGIAEALLATALG 296
Query: 186 LCVSIPSSIAYNKF 199
L +IP+ + YN F
Sbjct: 297 LVAAIPAVVIYNIF 310
>gi|315498553|ref|YP_004087357.1| mota/tolq/exbb proton channel [Asticcacaulis excentricus CB 48]
gi|315416565|gb|ADU13206.1| MotA/TolQ/ExbB proton channel [Asticcacaulis excentricus CB 48]
Length = 291
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 105/223 (47%), Gaps = 7/223 (3%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
I++ ++F+ VK ++ L S++SW++++ K + F L + + + F +S+
Sbjct: 66 ITVASMFIMAVPVVKAVMIGLVAASVISWTILVIKLMFFAKLNKSSNNYLEAFRGARSIA 125
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRM------MDVAIARE 124
+ + + G M+A++ + K A + + R + ++ A
Sbjct: 126 DINRISTSDEFAGNPMADMAAVATEEIQISKQAGLQVSGEHRDSTLHRASSSINAVQAGL 185
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISIL 183
+ ++ L+FL S S G VG+ G V G+M F IA + N+ V PGI E+L++
Sbjct: 186 AKRLSGGLTFLASTGSIGPFVGLFGTVYGIMNSFIGIADSGTTNLAVVAPGIAEALLATG 245
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+GL +IP+ + YN F + + E F E LSRQ +
Sbjct: 246 IGLAAAIPAVVMYNIFNTSIAAYGTRSEQFVAELMNSLSRQLD 288
>gi|300309940|ref|YP_003774032.1| biopolymer transport transmembrane protein [Herbaspirillum
seropedicae SmR1]
gi|300072725|gb|ADJ62124.1| biopolymer transport transmembrane protein [Herbaspirillum
seropedicae SmR1]
Length = 231
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 97/219 (44%), Gaps = 14/219 (6%)
Query: 14 FALFMQMGLAV-KCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
FA + G AV + LL I SI SW I+ K+ +RR E+ FW +L
Sbjct: 7 FAHYWAQGDAVSHSVAYLLLIMSIASWYYILSKAWAAWRIRRGSNALER-FWQAPTLADA 65
Query: 73 CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGAR--------SPIGIQDRIDRMMDVAIARE 124
+++ + I+ ++ D G R + + I R + I R
Sbjct: 66 TAAMQR---LDSEQIYTPMAERAAEAADIGTRQQGTPSLNAATDPGELITRTLRREINRV 122
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISIL 183
+ L+ L S+ S VG+ G V G+ +++ + + + G + E+LI
Sbjct: 123 SARLERGLTLLASVGSTAPFVGLFGTVWGIYHALVAVSASGTVQIDKVAGPVGEALIMTA 182
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
LGL V+IP+ +AYN F ++ +++GFA++ A L+
Sbjct: 183 LGLLVAIPAVLAYNAFTRINRVVLAELDGFAHDLHAYLT 221
>gi|134093598|ref|YP_001098673.1| biopolymer transport ExbB protein [Herminiimonas arsenicoxydans]
gi|133737501|emb|CAL60544.1| Biopolymer transport exbB protein [Herminiimonas arsenicoxydans]
Length = 242
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 99/227 (43%), Gaps = 10/227 (4%)
Query: 9 MDISIF---ALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS 65
M++S + +L+ Q K + LL SI SW VI K++ + RR R FW
Sbjct: 1 MEVSPYGLESLWSQGDFVTKGVAILLVAMSIASWYVIATKALQLMQYRRAARAAGHEFWD 60
Query: 66 GQSLETVCKSLKNHHNIG-LAAIFMSAMSEWKKSCDKGA-RSPIGIQDRIDRMMDVAIAR 123
SL +L + + +A ++AM KG + + D I + AI
Sbjct: 61 ATSLSEGTATLGSGNPFASIAEAGVTAMRH--HEAHKGHLHDELSVSDWITLSLRQAIDE 118
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLIS 181
++ ++ L S+ S VG+ G V G+ +I +G S + V+ P + E+LI
Sbjct: 119 TSAKLQTGMAVLASVGSTAPFVGLFGTVWGIYHALVAIGTSGQASIDKVAGP-VGEALIM 177
Query: 182 ILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
LGL V+IP++ YN + +K +M F + A+ N
Sbjct: 178 TALGLAVAIPATFGYNALVRGNKSLIAKMNKFGFDLHALFVTGARAN 224
>gi|254251909|ref|ZP_04945227.1| Biopolymer transport protein [Burkholderia dolosa AUO158]
gi|124894518|gb|EAY68398.1| Biopolymer transport protein [Burkholderia dolosa AUO158]
Length = 218
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 83/194 (42%), Gaps = 7/194 (3%)
Query: 33 IFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAM 92
+ S+LSW VII K N + L R + EQ FW + K L + F++
Sbjct: 1 MMSVLSWIVIIVKGWNVVRLNRLTKNAEQAFWHSDDFDDGIKKLGQAASTPSDNPFLALA 60
Query: 93 SEWKKSCDKGARSPIGIQDRID------RMMDVAIARELEEITEKLSFLGSMSSAGLLVG 146
K++ D ++ + DR+D R + + + + L+ L S+ S VG
Sbjct: 61 LSGKEAADHHHQTQPHLHDRMDVSDWITRCLKDTMDEGISRMQSGLAILASIGSTAPFVG 120
Query: 147 ILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCVSIPSSIAYNKFIEDSKK 205
+ G V G+ I ++ + G + ESLI GL V+IP+ + YN +K
Sbjct: 121 LFGTVWGIYHALLVIGATGQTSIDQVAGPVGESLIMTAFGLFVAIPAVLGYNALTRANKG 180
Query: 206 FAMQMEGFANEFSA 219
++ FA+ A
Sbjct: 181 VVSKLRRFAHGLHA 194
>gi|170739437|ref|YP_001768092.1| tonB-system energizer ExbB [Methylobacterium sp. 4-46]
gi|168193711|gb|ACA15658.1| tonB-system energizer ExbB [Methylobacterium sp. 4-46]
Length = 348
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 105/221 (47%), Gaps = 8/221 (3%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQF-REFEQLFWSG 66
I D+S +A+F+ + VK +++ L + S+++W+++ K+V RR R ++ +G
Sbjct: 118 IHDLSPWAMFLNADILVKIVMSGLALASVVTWTILAAKTVELGLARRGLGRALGRVAGAG 177
Query: 67 QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
SL + L + L + + + E + S G GI++R + E
Sbjct: 178 -SLAEAERELGGRDTV-LDRLVAAILDEVRISRGLGE----GIKERAASRCAEIVKAEGR 231
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLG 185
+ L ++ + VG+ G V G+M F IA + N+ V PGI E+L++ +G
Sbjct: 232 TARRGMGALATIGAISPFVGLFGTVWGIMNSFIGIARAQTTNLAVVAPGIAEALLATAIG 291
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
L +IP+ I YN F ++ + ++ + +LSR +
Sbjct: 292 LAAAIPAVIVYNHFARATRGYGELVQRASGAAQRLLSRDLD 332
>gi|323497269|ref|ZP_08102288.1| TonB-system energizer ExbB type-1 [Vibrio sinaloensis DSM 21326]
gi|323317626|gb|EGA70618.1| TonB-system energizer ExbB type-1 [Vibrio sinaloensis DSM 21326]
Length = 281
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 96/201 (47%), Gaps = 9/201 (4%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S ++ VK ++ L + SI W+V K + + ++ R+ +SL
Sbjct: 51 DLSPMGMYHAADWVVKAVMISLLLASIACWAVFFTKQIQVMFANQRTRKLLANLVVSESL 110
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMD---VAIARELE 126
+L H +A I +A E S GA S GI++R+ ++ + R++
Sbjct: 111 TDAEHALSQHKGNEIALI-TAAQHEMHMS-SLGATSEDGIKERVQLRLERVQAELGRKMT 168
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLG 185
+T L+ +GS+S VG+ G V G+M F IA S +V + PGI E+L++ +G
Sbjct: 169 SLTGVLATIGSVSP---FVGLFGTVWGIMNAFIGIAKAKSTTLVVVAPGIAEALLATAIG 225
Query: 186 LCVSIPSSIAYNKFIEDSKKF 206
L +IP+ + YN F K+
Sbjct: 226 LIAAIPAVMMYNYFTRYIAKY 246
>gi|227358185|ref|ZP_03842526.1| ExbB protein [Proteus mirabilis ATCC 29906]
gi|227161521|gb|EEI46558.1| ExbB protein [Proteus mirabilis ATCC 29906]
Length = 336
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 93/192 (48%), Gaps = 4/192 (2%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQK-SVNFITLRRQFREFEQLFWSGQS 68
D+S+ ++ L VK ++ L + SI++W++ K S RR E QL +
Sbjct: 113 DLSVMGMYRNADLVVKSVMIGLLLASIVTWALFFAKGSYLLALRRRLRNESAQLVEAKSL 172
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
E + S K + A F A E S D S GI++R++ M+ +A + E+
Sbjct: 173 KEALAISQKFGNKSATAVFFNDAELERTYSQDSHVAS--GIKERVEMRMERRVAAIIREL 230
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
+L ++ + +G+ G V G+M F IA + N+ V PGI E+L++ +GL
Sbjct: 231 GRGNGYLATIGAISPFIGLFGTVWGIMNSFIGIAHSQTTNLAVVAPGIAEALLATAIGLI 290
Query: 188 VSIPSSIAYNKF 199
+IP+ I YN F
Sbjct: 291 AAIPAVIIYNIF 302
>gi|309782378|ref|ZP_07677102.1| transporter, MotA/TolQ/ExbB proton channel family [Ralstonia sp.
5_7_47FAA]
gi|308918715|gb|EFP64388.1| transporter, MotA/TolQ/ExbB proton channel family [Ralstonia sp.
5_7_47FAA]
Length = 242
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 93/215 (43%), Gaps = 3/215 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
+ ++ + L+ Q + + LL I S+ SW VI K+ + + L+ + E+ FW
Sbjct: 1 MQELGLSHLWTQGDVVTRATAILLLIMSLASWIVIFTKAWDIVRLKSMAQGAEKRFWHSD 60
Query: 68 SLETVCKSLKNHHNIGLAAIFMSA--MSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
+ ++L + + + + ++ ++ + I D I R + AI +
Sbjct: 61 DFDHAIQTLGSPKDNPFHTLAQTGREAAQHHRASQPQLHDVMDISDWITRSLKSAIDEAV 120
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILL 184
++ L+ L S+ S VG+ G V G+ I + + G + ESLI
Sbjct: 121 GQMQSGLAVLASVGSTAPFVGLFGTVWGIYHALLGIGAVGVPTIDKVAGPVGESLIMTAF 180
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
GL V+IP+ + YN +K ++ FA++ A
Sbjct: 181 GLAVAIPAVLGYNALTRGNKAIIAKLNRFAHDLHA 215
>gi|193212304|ref|YP_001998257.1| protein TolQ [Chlorobaculum parvum NCIB 8327]
gi|193085781|gb|ACF11057.1| protein TolQ [Chlorobaculum parvum NCIB 8327]
Length = 220
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 94/185 (50%), Gaps = 3/185 (1%)
Query: 34 FSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMS 93
FSILSW++I K +++ ++F F+ Q+ + + + ++ + L +F +
Sbjct: 30 FSILSWAIIAWKFGMVRKSKKESQDFLDSFFELQNTDRLFATSESFRSGSLPRVFRAGYI 89
Query: 94 EWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLG 153
E+ ++G + +++ I R + + E + ++ + FL ++ + +G+ G V G
Sbjct: 90 EYSSMRNRGDDA--RLKEHIRRAVKREVNTESKRLSRLVPFLATVGNTAPFIGLFGTVWG 147
Query: 154 MMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEG 212
+M FQ+I S ++ ++ PGI E+L++ GL +IP+ I YN + + +E
Sbjct: 148 IMSSFQNIGLMKSASLAAVAPGISEALVATATGLVAAIPAVIGYNYLTSEIGQIERDLED 207
Query: 213 FANEF 217
F +F
Sbjct: 208 FVPDF 212
>gi|91780293|ref|YP_555500.1| MotA/TolQ/ExbB proton channel [Burkholderia xenovorans LB400]
gi|91692953|gb|ABE36150.1| outer membrane transport energization protein ExbB [Burkholderia
xenovorans LB400]
Length = 240
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 98/206 (47%), Gaps = 18/206 (8%)
Query: 22 LAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHN 81
L VK + L +FSI++W++I+ K + R + F++ FWS L +L N +
Sbjct: 8 LIVKGALWALVLFSIVTWALILAKGTQSWRVARNNQRFQKAFWSAGDLPQAA-ALGNPRD 66
Query: 82 IGLAAIFMSAMSEWKKSCDKGARSPIGIQD---------RIDRMMDVAIARELEEITEKL 132
L + +A + ++ + G+ D ++R++ I +E + L
Sbjct: 67 SALGRVAHAAFTALTETSE-------GLHDLEHSWDRLESLERLLRQQIVKERGSLESGL 119
Query: 133 SFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCVSIP 191
+ L S+ S VG+ G V G++ +I+ + ++ + G I E+L++ +G+ V++P
Sbjct: 120 AILASVGSTAPFVGLFGTVFGIVHAMTAISQNGTADIGVVAGPIGEALVTTGVGIAVAVP 179
Query: 192 SSIAYNKFIEDSKKFAMQMEGFANEF 217
+ +AYN F+ K ++ F +
Sbjct: 180 AVLAYNFFVRRLKVTGGVLDDFGTDL 205
>gi|317049560|ref|YP_004117208.1| tonB-system energizer ExbB [Pantoea sp. At-9b]
gi|316951177|gb|ADU70652.1| tonB-system energizer ExbB [Pantoea sp. At-9b]
Length = 247
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 105/227 (46%), Gaps = 11/227 (4%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S++ ++ + VK ++ L + S+++W++ K + +R+ + +SL
Sbjct: 10 DLSVWGMYHHADIVVKVVMIGLLLASVVTWAIFFGKFAELSSAKRRLKREHLALSDARSL 69
Query: 70 E---TVCKSLK-NHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
+ + S K N H+ A + A +E + S G GI++R ++ +A
Sbjct: 70 DDAASTAASFKGNSHS---AVLLNDAQNELELSA--GVEDTDGIKERTSFRLERRVAAFS 124
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILL 184
FL ++ S +G+ G V G+M F IA + N+ V PGI E+L++ +
Sbjct: 125 RHAGRGNGFLATIGSVAPFIGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGIAEALLATAI 184
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE-GNIS 230
GL +IP+ + YN F + + A + + SR + GN++
Sbjct: 185 GLVAAIPAVVIYNVFARMIAGYKASLGDVAAQVLLLQSRDLDLGNVT 231
>gi|271498917|ref|YP_003331942.1| tonB-system energizer ExbB [Dickeya dadantii Ech586]
gi|270342472|gb|ACZ75237.1| tonB-system energizer ExbB [Dickeya dadantii Ech586]
Length = 311
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 98/211 (46%), Gaps = 32/211 (15%)
Query: 5 GLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFW 64
GL D+S+ ++ + VK ++ L + S+++W++ KS + + +++ R Q
Sbjct: 71 GLMNTDLSVLGMYQHADVVVKTVMIGLLLASVVTWAIFFSKSASLMGAKKRIRREYQALE 130
Query: 65 SGQSLETVCKSLKNHHNIGLAAIFMS---------------AMSEWKKSCDKGARSPIGI 109
++L+ + +AA+F A+SE +S D G GI
Sbjct: 131 DARTLD---------DAVDIAAVFKPGSVSLQLLTDARNEQALSE--RSDDNG-----GI 174
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
++R + +A ++ +L ++ + +G+ G V G+M F IA + N+
Sbjct: 175 KERTAFRFERRVAATGRQMGRGTGYLATVGAIAPFIGLFGTVWGIMNSFIGIAQSQTTNL 234
Query: 170 -VSIPGIIESLISILLGLCVSIPSSIAYNKF 199
V PGI E+L++ +GL +IP+ + YN F
Sbjct: 235 AVVAPGIAEALLATAIGLVAAIPAVVIYNVF 265
>gi|241663387|ref|YP_002981747.1| MotA/TolQ/ExbB proton channel [Ralstonia pickettii 12D]
gi|240865414|gb|ACS63075.1| MotA/TolQ/ExbB proton channel [Ralstonia pickettii 12D]
Length = 242
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 93/215 (43%), Gaps = 3/215 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
+ ++ + L+ Q + + LL I S+ SW VI K+ + + L+ + E+ FW
Sbjct: 1 MQELGLSHLWTQGDIVTRATAILLLIMSLASWIVIFTKAWDIVRLKSMAQGAEKRFWHSD 60
Query: 68 SLETVCKSLKNHHNIGLAAIFMSA--MSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
+ ++L + + + + ++ ++ + I D I R + AI +
Sbjct: 61 DFDHAIQTLGSPKDNPFHTLAQTGREAAQHHRASQPQLHDVMDISDWITRSLKSAIDEAV 120
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILL 184
++ L+ L S+ S VG+ G V G+ I + + G + ESLI
Sbjct: 121 GQMQSGLAVLASVGSTAPFVGLFGTVWGIYHALLGIGAVGVPTIDKVAGPVGESLIMTAF 180
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
GL V+IP+ + YN +K ++ FA++ A
Sbjct: 181 GLAVAIPAVLGYNALTRGNKAIIAKLNRFAHDLHA 215
>gi|304413880|ref|ZP_07395297.1| membrane spanning protein in TolA-TolQ-TolR complex [Candidatus
Regiella insecticola LSR1]
gi|304283600|gb|EFL91995.1| membrane spanning protein in TolA-TolQ-TolR complex [Candidatus
Regiella insecticola LSR1]
Length = 117
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 60/109 (55%), Gaps = 1/109 (0%)
Query: 117 MDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGI 175
M +A+ RELE + + FLG++ S +G+ G V G+M F ++ + + PGI
Sbjct: 1 MRIAMNRELEMLETHIPFLGTVGSISPYIGLFGTVWGIMNAFIALGAAKQATLQMVAPGI 60
Query: 176 IESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
E+LI+ +GL +IP+ +AYN+ K + F EF+AIL RQ
Sbjct: 61 AEALIATAIGLFAAIPAVMAYNRLNLRVNKLEQNYDNFMEEFTAILHRQ 109
>gi|300310025|ref|YP_003774117.1| biopolymer transport transmembrane protein [Herbaspirillum
seropedicae SmR1]
gi|300072810|gb|ADJ62209.1| biopolymer transport transmembrane protein [Herbaspirillum
seropedicae SmR1]
Length = 243
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 99/219 (45%), Gaps = 10/219 (4%)
Query: 9 MDISIF---ALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS 65
M++S + +L+ Q K + LL SI SW VII K++ + LR+ FW
Sbjct: 1 MEVSPYGLESLWAQGDFVTKGVAVLLLAMSIASWYVIITKALQLLRLRKASAAAGHQFWD 60
Query: 66 GQSLETVCKSLKNHHNIG-LAAIFMSAMSEWKKSCDKGA-RSPIGIQDRIDRMMDVAIAR 123
+L +L + +A ++AMS + KG + + D + + AI
Sbjct: 61 TTNLPEGVATLGQDNPFAEVAKAGVTAMSH--HTAHKGHLHDQLSVSDWVTLSLRQAIDE 118
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA--GYYSNNVVSIPGIIESLIS 181
++ ++ L S+ S VG+ G V G+ SI G S + V+ P + E+LI
Sbjct: 119 ASGKLQAGMAVLASVGSTAPFVGLFGTVWGIYHALVSIGTTGQASIDKVAGP-VGEALIM 177
Query: 182 ILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAI 220
LGL V+IP++ YN + +K ++ F + A+
Sbjct: 178 TALGLAVAIPATFGYNALVRGNKTILAKLNKFGFDLHAL 216
>gi|212709139|ref|ZP_03317267.1| hypothetical protein PROVALCAL_00172 [Providencia alcalifaciens DSM
30120]
gi|212688051|gb|EEB47579.1| hypothetical protein PROVALCAL_00172 [Providencia alcalifaciens DSM
30120]
Length = 254
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 108/221 (48%), Gaps = 8/221 (3%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S++ ++ + VK ++ L + S+++W++ + K + RR+ ++ + +SL
Sbjct: 31 DLSVWGMYQNADVVVKTVMIGLLLASVITWALFLSKGSEILVARRRLKDEAKAIAEVKSL 90
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMD---VAIARELE 126
+ S+ + + A + +++ ++ GI+DR ++ AI+R +
Sbjct: 91 DEAV-SIADGFKANSITRMLLAEATTERALSASSQDLSGIKDRTAFRLERSVAAISRYMG 149
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLG 185
L+ +G++S VG+ G V G+M F IA + N+ V PGI E+L++ +G
Sbjct: 150 RGNGYLATIGAISP---FVGLFGTVWGIMNSFIGIAHSQTTNLAVVAPGIAEALLATAIG 206
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
L +IP+ + YN F + Q+ A + + +L R +
Sbjct: 207 LIAAIPAVVIYNIFARMINNYRGQVGDVAAQAALLLGRDLD 247
>gi|146279028|ref|YP_001169187.1| MotA/TolQ/ExbB proton channel [Rhodobacter sphaeroides ATCC 17025]
gi|145557269|gb|ABP71882.1| MotA/TolQ/ExbB proton channel [Rhodobacter sphaeroides ATCC 17025]
Length = 355
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 103/220 (46%), Gaps = 11/220 (5%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D++ + +F V+ ++ +L S ++W+V++ K V RR+ +L
Sbjct: 131 DLTPWGMFEAAHWVVQAVMIVLAAASFVTWTVLLFKLVEIAIARRRLASTAGTVRGSATL 190
Query: 70 ETVCKSLKNHHNIGLAAIFMS--AMSEWKKS---CDKGARSPIGIQDRIDRMMDVAIARE 124
+ + L + A FM+ A E ++S D + G+++R+ +++ A+
Sbjct: 191 DEAVQRLSGRRD---PAAFMARAAFEELQRSDAALDLAGTA--GLKERVRSILERVEAQA 245
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISIL 183
E + + L ++ S G VG+ G V G+M F I+ + N+ V PGI E+L++
Sbjct: 246 GERLRRGIGLLATIGSVGPFVGLFGTVWGIMNAFIGISQSQTTNLAVVAPGIAEALLATG 305
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
LGL +IP+ + YN F+ + + + +LSR
Sbjct: 306 LGLVAAIPAVVIYNHFVRSIASWRLSLADAGAAVERMLSR 345
>gi|126463339|ref|YP_001044453.1| MotA/TolQ/ExbB proton channel [Rhodobacter sphaeroides ATCC 17029]
gi|126105003|gb|ABN77681.1| MotA/TolQ/ExbB proton channel [Rhodobacter sphaeroides ATCC 17029]
Length = 363
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 108/226 (47%), Gaps = 12/226 (5%)
Query: 5 GLAI-MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLF 63
GL I D++ + +F V+ ++ LL S ++W+V++ K V RR+
Sbjct: 133 GLPIPHDLTPWGMFEAAHWVVQAVMILLAAASFVTWTVLLFKLVEIAIARRRLARTAATV 192
Query: 64 WSGQSLETVCKSLKNHHNIGLAAIFMSAMS--EWKKS---CDKGARSPIGIQDRIDRMMD 118
+ +LE V + L + A FM+ S E ++S D + G+++R+ +++
Sbjct: 193 ETSATLEEVVRRLSGRKD---PAAFMARASFEELQRSDAALDLAGTA--GLKERVRSILE 247
Query: 119 VAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIE 177
A+ E + + L ++ S G VG+ G V G+M F I+ + N+ V PGI E
Sbjct: 248 RVEAQAGERLRRGIGLLATIGSVGPFVGLFGTVWGIMNAFIGISQSQTTNLAVVAPGIAE 307
Query: 178 SLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
+L++ LGL +IP+ + YN F+ + + + +LSR
Sbjct: 308 ALLATGLGLVAAIPAVVIYNHFVRSIASWRLSLADAGAAIERMLSR 353
>gi|227112807|ref|ZP_03826463.1| biopolymer transport protein [Pectobacterium carotovorum subsp.
brasiliensis PBR1692]
Length = 239
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 95/193 (49%), Gaps = 6/193 (3%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S++ ++ VK ++ L + S+++W++ KSV +R+ R + + + +
Sbjct: 4 DLSVWGMYQHADAVVKTVMIGLLLASVITWAIFFSKSVEMSGAKRRLR---REYLALEQA 60
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPI--GIQDRIDRMMDVAIARELEE 127
+T+ +L+ ++ + + + + ARS GI++R ++ +A
Sbjct: 61 KTLDDALETADAFKAGSVAQQLLIDAQNELELSARSDDNNGIKERTAFRLERRVAATGRH 120
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
+ +L ++ + VG+ G V G+M F IA + N+ V PGI E+L++ +GL
Sbjct: 121 MGRGNGYLATVGAVAPFVGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGIAEALLATAIGL 180
Query: 187 CVSIPSSIAYNKF 199
+IP+ + YN F
Sbjct: 181 VAAIPAVVIYNVF 193
>gi|253686750|ref|YP_003015940.1| tonB-system energizer ExbB [Pectobacterium carotovorum subsp.
carotovorum PC1]
gi|251753328|gb|ACT11404.1| tonB-system energizer ExbB [Pectobacterium carotovorum subsp.
carotovorum PC1]
Length = 336
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 95/194 (48%), Gaps = 8/194 (4%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFR-EFEQLFWSGQS 68
D+S++ ++ VK ++ L + S+++W++ KSV +R+ R E+ L +
Sbjct: 101 DLSVWGMYQHADAVVKTVMIGLLLASVITWAIFFSKSVEMSGAKRRLRREYLAL----EQ 156
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPI--GIQDRIDRMMDVAIARELE 126
+T+ +L+ ++ + + + + ARS GI++R ++ +A
Sbjct: 157 AKTLDDALETADAFKTGSVAQQLLVDAQNELELSARSDDNNGIKERTAFRLERRVAATGR 216
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLG 185
+ +L ++ + VG+ G V G+M F IA + N+ V PGI E+L++ +G
Sbjct: 217 HMGRGNGYLATVGAVAPFVGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGIAEALLATAIG 276
Query: 186 LCVSIPSSIAYNKF 199
L +IP+ + YN F
Sbjct: 277 LVAAIPAVVIYNVF 290
>gi|237746079|ref|ZP_04576559.1| MotA/TolQ/ExbB proton channel family protein [Oxalobacter
formigenes HOxBLS]
gi|229377430|gb|EEO27521.1| MotA/TolQ/ExbB proton channel family protein [Oxalobacter
formigenes HOxBLS]
Length = 235
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 103/220 (46%), Gaps = 12/220 (5%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVI---IQKSVNFITLRRQFRE 58
N YG + AL+ Q G ++C+ LL S++SW++I + ++ L ++
Sbjct: 4 NPYG-------VLALWNQGGWVIRCVALLLLAMSVVSWTIIAARVWRAWKLYGLSKRMAV 56
Query: 59 FEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMD 118
F + LE + + +++ LA + A + + +K R +G+ + + +
Sbjct: 57 FWKATTFSAGLEMLETAPEDNPFHALARDGLIAAKHYTEGPEK-LRERMGMAEWLTENLR 115
Query: 119 VAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-E 177
+I + ++ LS L S+ + +G+ G V G+ SI ++ I G + E
Sbjct: 116 GSIDESMAKMQHGLSALASIGATAPFIGLFGTVWGIYHALVSIGVSGQASIDKIAGPVGE 175
Query: 178 SLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEF 217
SLI LGL V+IP+ + YN +++FA Q+ FA +
Sbjct: 176 SLIMTALGLAVAIPAVLGYNALTRINRRFAGQLNRFARQL 215
>gi|85716760|ref|ZP_01047728.1| ABC transporter, ATPase subunit [Nitrobacter sp. Nb-311A]
gi|85696478|gb|EAQ34368.1| ABC transporter, ATPase subunit [Nitrobacter sp. Nb-311A]
Length = 1014
Score = 69.3 bits (168), Expect = 4e-10, Method: Composition-based stats.
Identities = 55/220 (25%), Positives = 103/220 (46%), Gaps = 6/220 (2%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFRE-FEQLFWSGQS 68
D+S + +FMQ + VK ++ L S+++W++ + + V RR+ + +L +G
Sbjct: 777 DLSPWGMFMQADIIVKAVMIGLAFASLVTWTIWLARGVELAASRRRAQSCLRKLERAGTL 836
Query: 69 LETVCKSLKNHHNIGLAAIFM-SAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + G + M +A +E ++S D + GI++R+ + A+ +
Sbjct: 837 AAARAEIAEGWTGKGPVSDLMEAAENECRRSNDLSSE---GIKERLAIALSRIEAKAGRD 893
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
I L ++ + VG+ G V G+M F I+ + N+ V PGI E+L++ LGL
Sbjct: 894 IARGTGLLATIGATAPFVGLFGTVWGIMNAFIGISHSKTTNLAVVAPGIAEALLATALGL 953
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ I YN F + + + E +SR E
Sbjct: 954 VAAIPAVIIYNVFARALSSYRALLSDASGEIIQHISRDLE 993
>gi|197283944|ref|YP_002149816.1| biopolymer transport protein [Proteus mirabilis HI4320]
gi|194681431|emb|CAR40269.1| biopolymer transport protein [Proteus mirabilis HI4320]
Length = 336
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 93/192 (48%), Gaps = 4/192 (2%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQK-SVNFITLRRQFREFEQLFWSGQS 68
D+S+ ++ L VK ++ L + SI++W++ K S RR E QL +
Sbjct: 113 DLSVMGMYRNADLVVKSVMIGLLLASIVTWALFFAKGSYLLALRRRLRNESAQLVEAKSL 172
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
E + S K + A F A E S D S GI++R++ M+ +A + E+
Sbjct: 173 KEALAISQKFGNKSATADFFNDAELERTYSQDSHVAS--GIKERVEMRMERRVAAIIREL 230
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
+L ++ + +G+ G V G+M F IA + N+ V PGI E+L++ +GL
Sbjct: 231 GRGNGYLATIGAISPFIGLFGTVWGIMNSFIGIAHSQTTNLAVVAPGIAEALLATAIGLI 290
Query: 188 VSIPSSIAYNKF 199
+IP+ I YN F
Sbjct: 291 AAIPAVIIYNIF 302
>gi|307823184|ref|ZP_07653414.1| MotA/TolQ/ExbB proton channel [Methylobacter tundripaludum SV96]
gi|307735959|gb|EFO06806.1| MotA/TolQ/ExbB proton channel [Methylobacter tundripaludum SV96]
Length = 221
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 99/210 (47%), Gaps = 12/210 (5%)
Query: 18 MQMGLAVKCIIT----LLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVC 73
M +A + II L FS+ +W+VI K F + R F FW L T
Sbjct: 1 MPHHIAPEVIINGTLYTLLAFSVATWTVIFFKIWEFTNNGYRNRRFNAAFWDAADL-THA 59
Query: 74 KSLKNHHNIG----LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+S+ IG +A + ++E +++ K R + ++ + V + RE +
Sbjct: 60 ESVPADTAIGPQARIAQQGFAWLNESQQADGKHLRYIGAPAELLEHSLQVQMQREQHLME 119
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGLC 187
L+ L S+ S VG+ G VLG+M I +G S +VV+ P I ++L++ +G+
Sbjct: 120 SGLTLLASIGSTSPFVGLFGTVLGIMHAMHEITASGSTSLDVVAGP-IGDALVATAIGIA 178
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEF 217
V++P+ +AYN F+ K+ +E F F
Sbjct: 179 VAVPAVLAYNFFLRRVKQQRAGLENFVTSF 208
>gi|318604211|emb|CBY25709.1| mota/TolQ/ExbB proton channel family protein [Yersinia
enterocolitica subsp. palearctica Y11]
Length = 336
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 99/197 (50%), Gaps = 5/197 (2%)
Query: 5 GLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFW 64
GLA MD+S++ ++ + VK ++ L + SI++W+++ K RR+ ++ ++
Sbjct: 97 GLA-MDLSVWGMYQHADVVVKGVMIGLVLASIVTWTILFSKGTELFRARRRLQQEHEVIG 155
Query: 65 SGQSLETVCKSLKNHHNIGLAAIFM-SAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAR 123
+ L+ + ++ + + A +E S + + GI++R ++ +A
Sbjct: 156 AVTDLDIASERAAAFSPESISGLLLREAQNERLLSAESNDNN--GIKERTAFRLERRVAA 213
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISI 182
++ + FL ++ + VG+ G V G+M F IA + N+ V PGI E+L++
Sbjct: 214 ISRQMGKGNGFLATIGAISPFVGLFGTVWGIMNSFIGIAHSQTTNLAVVAPGIAEALLAT 273
Query: 183 LLGLCVSIPSSIAYNKF 199
LGL +IP+ + YN F
Sbjct: 274 ALGLVAAIPAVVIYNIF 290
>gi|49474662|ref|YP_032704.1| biopolymer transport exbB protein [Bartonella quintana str.
Toulouse]
gi|49240166|emb|CAF26630.1| Biopolymer transport exbB protein [Bartonella quintana str.
Toulouse]
Length = 280
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 110/256 (42%), Gaps = 39/256 (15%)
Query: 6 LAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS 65
LA D+S F++F+ VK +I +L + S+ SW++ K V +R+ R QL
Sbjct: 15 LAAHDLSPFSIFIAADWVVKAVIVILLLASLASWTIAFVKIVEITLAKRRARRELQLVLK 74
Query: 66 GQSLETVCKSLKNHHNIG-------LAAIFMSA----------MSEWKKSCDKGARS--- 105
Q+L + SLK+ G L +++S +SE K +GA S
Sbjct: 75 AQTLTRLAASLKDSKGPGVTFLKETLKEVYLSTQQVNFIATEDLSE--KQGRQGAFSEET 132
Query: 106 -PI---------------GIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILG 149
P G+++RI ++ + + + + L ++ + VG+
Sbjct: 133 IPYEEIPRYGEITRDVNEGVKERIRSLLSRCLLANMRRVACGSAVLATIGAIAPFVGLFA 192
Query: 150 AVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAM 208
V G+M F IA + V PGI E+L++ +GL V+IP+ + YN + +
Sbjct: 193 TVWGIMNSFIGIAESQITRLDVVAPGIAEALLATAVGLFVAIPAVVMYNSLMRALSSYRN 252
Query: 209 QMEGFANEFSAILSRQ 224
+ A +LSR+
Sbjct: 253 DLGDIAAALERLLSRE 268
>gi|290954091|ref|ZP_06558712.1| TolQ protein [Francisella tularensis subsp. holarctica URFT1]
gi|295312522|ref|ZP_06803286.1| TolQ protein [Francisella tularensis subsp. holarctica URFT1]
Length = 171
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 82/155 (52%), Gaps = 2/155 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
IS+ L + V+ I+ L S+ SW+++++ + R + +F++LFW+G ++
Sbjct: 5 ISLVELVLHANFIVQLIMLALVAMSVYSWAIMLEVNNRVKKYRNEQVQFDKLFWAGHHIQ 64
Query: 71 TVCKS-LKNHHNI-GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ L++ NI G + IF S + E+ D I + ++R + +AIA+E +E+
Sbjct: 65 KLYDYYLQHKENIFGKSIIFCSGLREFNNLKDTCMLRGDTILEGMERTVSIAIAQEAKEL 124
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAG 163
KL L ++ + +G++G V G+M F ++ G
Sbjct: 125 DRKLPALATIGAVAPYIGLVGTVWGIMSSFNTLGG 159
>gi|126730594|ref|ZP_01746404.1| probable biopolymer transport transmembrane protein [Sagittula
stellata E-37]
gi|126708760|gb|EBA07816.1| probable biopolymer transport transmembrane protein [Sagittula
stellata E-37]
Length = 269
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 97/192 (50%), Gaps = 13/192 (6%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQF-REFEQLFWSGQSL 69
+S +++ + VK ++ L + S+L W++ + + V RR+ R + L +G +L
Sbjct: 34 MSPVGMYLAADIVVKSVMVSLAVASVLVWAIFVARVVLLTLARRRLARNYRALDRAG-TL 92
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMM---DVAIARELE 126
E + + + A+ A++E ++S G GI++R + + +V AR +
Sbjct: 93 EVAEARFRKRRGV-MGAMVRVALAERQRS---GTAPDGGIKERAESALSRIEVGAARSQQ 148
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLG 185
+ L+ GS + VG+ G V G+M F SIA + N+ V PGI E+L++ +G
Sbjct: 149 RGSALLAITGSTAP---FVGLFGTVWGIMNSFISIAETNTTNLAVVAPGIAEALLATAIG 205
Query: 186 LCVSIPSSIAYN 197
L +IP+ I YN
Sbjct: 206 LVAAIPAVIFYN 217
>gi|300718399|ref|YP_003743202.1| Biopolymer transport ExbB protein [Erwinia billingiae Eb661]
gi|299064235|emb|CAX61355.1| Biopolymer transport ExbB protein [Erwinia billingiae Eb661]
Length = 238
Score = 68.9 bits (167), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 90/191 (47%), Gaps = 2/191 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S++ ++ + VK ++ L + S+++W++ KS +R+ + + +SL
Sbjct: 4 DLSVWGMYQHADIVVKVVMIGLLLASVVTWAIFFSKSFELSAAKRRLKNEQNALAGARSL 63
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+ + + L F+ +E + G+ GI++R ++ +A
Sbjct: 64 QEAAQISASFKAGSLTTQFLKE-AENELELSAGSDDDNGIKERTSFRLERRVAFFSRHAG 122
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCV 188
FL ++ + VG+ G V G+M F IA + N+ V PGI E+L++ +GL
Sbjct: 123 RGNGFLATIGAIAPFVGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGIAEALLATAIGLVA 182
Query: 189 SIPSSIAYNKF 199
+IP+ + YN F
Sbjct: 183 AIPAVVIYNVF 193
>gi|150396365|ref|YP_001326832.1| TonB-system energizer ExbB type-1 [Sinorhizobium medicae WSM419]
gi|150027880|gb|ABR59997.1| TonB-system energizer ExbB type-1 [Sinorhizobium medicae WSM419]
Length = 325
Score = 68.9 bits (167), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 92/192 (47%), Gaps = 3/192 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S +F+ + VK ++ L + S+ +W++ I K++ + + + S L
Sbjct: 83 DLSPVGMFLAADIVVKAVMIALALASVATWAIFIVKTLELAYAKSRLKRAVANLVSANGL 142
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSP-IGIQDRIDRMMDVAIARELEEI 128
V L+ + + +A+ E +S +P G+++R+ ++ R + +
Sbjct: 143 AEVHSKLERRSGVA-GNMVTAAIDEMTRSEAVLDLTPSAGVKERVSSLLTRIEVRAGKRM 201
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLC 187
+ L S+ S G VG+ G V G+M F I+ + N+ + PGI E+L++ +GL
Sbjct: 202 SAGTGILASIGSVGPFVGLFGTVWGIMNSFIGISKAQTTNLAIVAPGIAEALLATAIGLV 261
Query: 188 VSIPSSIAYNKF 199
+IP+ + YN F
Sbjct: 262 AAIPAVVIYNYF 273
>gi|330899694|gb|EGH31113.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. japonica
str. M301072PT]
Length = 222
Score = 68.9 bits (167), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 93/194 (47%), Gaps = 5/194 (2%)
Query: 31 LFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIG-LAAIFM 89
L + SI SW V++ K V R + + + FWS +L+ + L +H L +
Sbjct: 6 LLVMSIASWYVMVDKLVRLALHRLRSPKLLEAFWSAPTLKDGVQQLGHHSAYAELTQAGV 65
Query: 90 SAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILG 149
SA + + + D G P + ++R + A ++ ++ L ++ S+ VG+LG
Sbjct: 66 SAARQHRDALD-GDMHPPAFSEWLNRALRQATLTVGGQLQGGMAILATVGSSAPFVGLLG 124
Query: 150 AVLGMMGFFQSIA--GYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFA 207
V G+ I G S + V+ P + E+LI LGL V+IP+++ YN + +K+
Sbjct: 125 TVWGIYHALMKIGLTGDASIDKVAGP-VGETLIMTALGLAVAIPATLGYNLLVRSNKQTL 183
Query: 208 MQMEGFANEFSAIL 221
++ FA E +L
Sbjct: 184 AELGKFAFELHDLL 197
>gi|194290134|ref|YP_002006041.1| biopolymer transporter [Cupriavidus taiwanensis LMG 19424]
gi|193223969|emb|CAQ69978.1| BIOPOLYMER TRANSPORT PROTEIN [Cupriavidus taiwanensis LMG 19424]
Length = 242
Score = 68.9 bits (167), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 99/218 (45%), Gaps = 9/218 (4%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
+ D+ + L+ Q ++ +L I S+ SW VI+ K+ + + L++ + E+ FW
Sbjct: 1 MQDLGLTHLWSQGDFVMRATAIILLIMSLASWIVILTKAWDLVRLKKMAQGAEKRFWHSD 60
Query: 68 SLETVCKSL--KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
+ ++L + + AI ++ ++ + I D + R + +I +
Sbjct: 61 DFDHALETLGAGDSNPFRTLAIAGKEAAQHHRASQPQLHDVMDISDWLTRSLKSSIDESV 120
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII----ESLIS 181
+ L+ L S+ S VG+ G V G+ + ++ G ++ V +I + E+LI
Sbjct: 121 ARMQSGLAVLASVGSTAPFVGLFGTVWGI---YHALIGIGASGVPTIDKVAGPVGEALIM 177
Query: 182 ILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
GL V+IP+ + YN +K ++ FA++ A
Sbjct: 178 TAFGLAVAIPAVLGYNALTRGNKSVISKLNRFAHDLHA 215
>gi|113868499|ref|YP_726988.1| biopolymer transport protein [Ralstonia eutropha H16]
gi|113527275|emb|CAJ93620.1| biopolymer transport protein [Ralstonia eutropha H16]
Length = 242
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 98/218 (44%), Gaps = 9/218 (4%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
+ D+ + L+ Q ++ +L I S+ SW VI+ K+ + + L++ E+ FW
Sbjct: 1 MQDLGLSHLWTQGDFVMRATAIILLIMSLASWIVILTKAWDLVRLKKMAHGAEKRFWHSD 60
Query: 68 SLETVCKSL--KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
+ ++L + + AI ++ ++ + I D + R + +I +
Sbjct: 61 DFDHALETLGAGDSNPFRTLAIAGKEAAQHHRASQPQLHDVMDISDWLTRSLKSSIDDSV 120
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII----ESLIS 181
+ L+ L S+ S VG+ G V G+ + ++ G ++ V +I + E+LI
Sbjct: 121 AHMQSGLAVLASVGSTAPFVGLFGTVWGI---YHALIGIGASGVPTIDKVAGPVGEALIM 177
Query: 182 ILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
GL V+IP+ + YN +K ++ FA++ A
Sbjct: 178 TAFGLAVAIPAVLGYNALTRGNKSVISKLNRFAHDLHA 215
>gi|194337190|ref|YP_002018984.1| protein TolQ [Pelodictyon phaeoclathratiforme BU-1]
gi|194309667|gb|ACF44367.1| protein TolQ [Pelodictyon phaeoclathratiforme BU-1]
Length = 219
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 105/211 (49%), Gaps = 9/211 (4%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFRE---FEQLFWSGQ 67
+ IF LF G V ++++L FS++SW++I K F LR+ RE F F++
Sbjct: 6 LGIFGLFSDAGPVVLMVLSILLAFSVISWAIIAFK---FGYLRKSLRESRLFLDYFFAVS 62
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+++ V +N L +F + E++ DK + RI R M + E +
Sbjct: 63 NVDKVFTECENFRTGSLPRVFRACYIEYRSLGDKSDLRQG--RARIARAMKREVNAENKR 120
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
++ + FL ++ + +G+ G V G+M FQ+I S ++ ++ PGI E+LI+ GL
Sbjct: 121 LSTLVPFLATVGNTAPFIGLFGTVWGIMNSFQNIGMTQSASLAAVAPGISEALIATAAGL 180
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEF 217
+IP+ + YN F + +E F+ EF
Sbjct: 181 AAAIPAVMGYNFFAQQIGMIERDLEEFSPEF 211
>gi|330969777|gb|EGH69843.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. aceris str.
M302273PT]
Length = 227
Score = 68.6 bits (166), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 99/210 (47%), Gaps = 7/210 (3%)
Query: 16 LFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKS 75
L+ Q + + + L + SI SW V++ K V R + + + FW+ +L+ +
Sbjct: 11 LWQQADVVTRGVALTLLVMSIASWYVMVDKLVRLALHRLRSPKLLEAFWNAPTLKDGVQQ 70
Query: 76 LKNHHNIGLAAIFMSAMSEWKKSCD--KGARSPIGIQDRIDRMMDVAIARELEEITEKLS 133
L HH+ A + + +S ++ D G P + + R + A ++ ++
Sbjct: 71 L-GHHS-AYAELTQAGVSAARQHRDALNGDMHPPAFSEWLTRALRQATLTVGGQLQGGMA 128
Query: 134 FLGSMSSAGLLVGILGAVLGMMGFFQSIA--GYYSNNVVSIPGIIESLISILLGLCVSIP 191
L ++ S+ VG+LG V G+ I G S + V+ P + E+LI LGL V+IP
Sbjct: 129 ILATVGSSAPFVGLLGTVWGIYHALMKIGLTGDASIDKVAGP-VGETLIMTALGLAVAIP 187
Query: 192 SSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+++ YN + +K+ ++ FA E +L
Sbjct: 188 ATLGYNLLVRSNKQTLAELGKFAFELHDLL 217
>gi|66047724|ref|YP_237565.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. syringae
B728a]
gi|63258431|gb|AAY39527.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. syringae
B728a]
Length = 242
Score = 68.6 bits (166), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 98/210 (46%), Gaps = 7/210 (3%)
Query: 16 LFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKS 75
L+ Q + + + L + SI SW V++ K V R + + + FW+ +L+ +
Sbjct: 11 LWQQADVVTRGVALTLLVMSIASWYVMVDKLVRLALHRLRSPKLLEAFWNAPTLKDGVQQ 70
Query: 76 LKNHHNIGLAAIFMSAMSEWKKSCD--KGARSPIGIQDRIDRMMDVAIARELEEITEKLS 133
L +H A + + +S ++ D G P + + R + A ++ ++
Sbjct: 71 LGHHS--AYAELTQAGVSAARQHRDALNGDMHPPAFSEWLTRALRQATLTVGGQLQGGMA 128
Query: 134 FLGSMSSAGLLVGILGAVLGMMGFFQSIA--GYYSNNVVSIPGIIESLISILLGLCVSIP 191
L ++ S+ VG+LG V G+ I G S + V+ P + E+LI LGL V+IP
Sbjct: 129 ILATVGSSAPFVGLLGTVWGIYHALMKIGLTGDASIDKVAGP-VGETLIMTALGLAVAIP 187
Query: 192 SSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+++ YN + +K+ ++ FA E +L
Sbjct: 188 ATLGYNLLVRSNKQTLAELGKFAFELHDLL 217
>gi|237748490|ref|ZP_04578970.1| MotA/TolQ/ExbB proton channel [Oxalobacter formigenes OXCC13]
gi|229379852|gb|EEO29943.1| MotA/TolQ/ExbB proton channel [Oxalobacter formigenes OXCC13]
Length = 234
Score = 68.6 bits (166), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 106/224 (47%), Gaps = 16/224 (7%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YG I AL+ Q G +K + LL + S+ SW++I ++ L +E
Sbjct: 4 NPYG-------IMALWNQGGWIIKFVALLLLVMSVASWTIIALRAWRAWKLYGLSKEIAA 56
Query: 62 LFWSGQSLETVCKSLK----NHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMM 117
FW + +SLK ++ LAA + A S ++ ++ +S IG+ + + +
Sbjct: 57 -FWKAPTFAKGLESLKTVPDDNPFHALAAEGLQAASL-HQAGEQNLQSKIGLPEWLTESL 114
Query: 118 DVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGI 175
+I ++ LS L S+ + +G+ G V G+ SI +G S + ++ P +
Sbjct: 115 RGSIDDSTAKMQSGLSILASIGATAPFIGLFGTVWGIYHALVSIGISGQASIDKIAGP-V 173
Query: 176 IESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
ESLI LGL V+IP+ + YN I +++ Q+ FA + A
Sbjct: 174 GESLIMTALGLAVAIPAVLGYNALIRINRRLVGQLNRFARQLYA 217
>gi|124268903|ref|YP_001022907.1| MotA/TolQ/ExbB proton channel family protein [Methylibium
petroleiphilum PM1]
gi|124261678|gb|ABM96672.1| MotA/TolQ/ExbB proton channel family protein [Methylibium
petroleiphilum PM1]
Length = 247
Score = 68.6 bits (166), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 99/218 (45%), Gaps = 12/218 (5%)
Query: 14 FALFM-QMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
FA F+ Q K ++ +L + S +SW++I+ K + + R+ +F FW+ +SL+ V
Sbjct: 3 FAHFIAQSDFVGKSLLAVLVVMSAISWTLIVVKGLGQLLRTRRSEKFLLFFWNARSLDEV 62
Query: 73 CKSLKNH-------HNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
+ H H L A ++A + + QD + R + + E
Sbjct: 63 GAEIGTHGVQEPFAH---LTAHAINAQAHHARYGAAKLEEAGTAQDFVTRTIKKVLDEET 119
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILL 184
+ L++L ++ + VG+ G V G+ +I S + + G + E+LI +
Sbjct: 120 TRLENGLTWLATIGATAPFVGLFGTVWGVYHALVAIGMSGSGTLDKVAGPVGEALIMTGI 179
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
GL V+IP+ +AYN ++ +++ FA E LS
Sbjct: 180 GLAVAIPAVMAYNAITRSNRVLNAKLDAFAFELMTFLS 217
>gi|167841252|ref|ZP_02467936.1| MotA/TolQ/ExbB proton channel [Burkholderia thailandensis MSMB43]
Length = 299
Score = 68.6 bits (166), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 94/213 (44%), Gaps = 31/213 (14%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLA 85
+IT+L + +SW V+ K+ + R F Q F + + H +GLA
Sbjct: 79 VVITVLLAMAAISWFVMWTKARYVGAVDRANGYFVQRF----------REVAGRHLVGLA 128
Query: 86 AI------------------FMSAMSEWKKSCDKGARSPIGIQ--DRIDRMMDVAIAREL 125
+ + + + E D R+ I + + I MD + RE
Sbjct: 129 HVDARSDEGRRLAQSSLYRLYRAGVDEIHSRVDDNGRTVITTESIEAIRASMDATLVREN 188
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILL 184
+ +++ + L S G +G+LG V+G+M F +IA NV +I PGI +L++ +
Sbjct: 189 QRLSKSMVLLTIAISGGPFLGLLGTVVGVMITFAAIAAAGDVNVNAIAPGIAAALLATVT 248
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEF 217
GL V+IP+ YN + +K M+ F +EF
Sbjct: 249 GLFVAIPALFGYNYLLIRNKNVTANMQVFVDEF 281
>gi|167567040|ref|ZP_02359956.1| MotA/TolQ/ExbB proton channel [Burkholderia oklahomensis EO147]
gi|167574117|ref|ZP_02366991.1| MotA/TolQ/ExbB proton channel [Burkholderia oklahomensis C6786]
Length = 286
Score = 68.6 bits (166), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 103/228 (45%), Gaps = 25/228 (10%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YGL AL+ + ++ LL + S+ SW ++I K + + R+ + ++
Sbjct: 57 NPYGLG-------ALWKNGDFVARFVLLLLVVMSMGSWYIMIAKFLEQLRANRRAKVADE 109
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDR--MMDV 119
WS SL K L A + + + G + + +DR +DV
Sbjct: 110 QLWSAPSLAEGAKRLDEASPFRFIA---------ETAIEAGEHHDNALLEAVDRNTWIDV 160
Query: 120 AIARELEEITEK----LSFLGSMSSAGLLVGILGAVLGMMGFFQS--IAGYYSNNVVSIP 173
++ R + ++ + L+FLG++ S VG+ G V G+ + IAG S + V+ P
Sbjct: 161 SVERAITNVSNRLQDGLAFLGTVGSTAPFVGLFGTVWGIYHALTAIGIAGQASIDKVAGP 220
Query: 174 GIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+ E+LI +GL V++P+ + YN + +K ++ F + +L
Sbjct: 221 -VGEALIMTAIGLAVAVPAVLGYNFLVRRNKSVMERVRNFGAQLHTVL 267
>gi|220904727|ref|YP_002480039.1| MotA/TolQ/ExbB proton channel [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
gi|219869026|gb|ACL49361.1| MotA/TolQ/ExbB proton channel [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
Length = 229
Score = 68.6 bits (166), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 95/192 (49%), Gaps = 8/192 (4%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLET 71
S+ +Q L KC++ LL S+ SW+ + K ++TLR R ++ +
Sbjct: 3 SMIEAVLQATLISKCVLVLLLFMSVSSWAYMCGK---WLTLRSAQRRTQRGLVAFDDAGE 59
Query: 72 VCKSL---KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+C++L + L I A+ E+ + G + + D + R + AIA E+ +
Sbjct: 60 LCQALPVMEADRQSPLYGITRRAVREYNRLTRTGDTERL-LNDNVRRALHFAIAEEVARL 118
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLC 187
L+ L + ++ +G+ G V G+M F +IA S ++ ++ PGI E+LI+ +GL
Sbjct: 119 KSSLALLATAANTAPFIGLFGTVWGIMHSFTAIAQMKSVSLATVAPGIAEALIATAVGLF 178
Query: 188 VSIPSSIAYNKF 199
V+IP+ YN F
Sbjct: 179 VAIPAVCGYNVF 190
>gi|163869099|ref|YP_001610335.1| biopolymer transport exbB protein [Bartonella tribocorum CIP
105476]
gi|161018782|emb|CAK02340.1| biopolymer transport exbB protein [Bartonella tribocorum CIP
105476]
Length = 291
Score = 68.6 bits (166), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 110/267 (41%), Gaps = 46/267 (17%)
Query: 6 LAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS 65
LA+ D S F++FM VK +I LL + S++SW++ K + +R+ R +L +
Sbjct: 15 LAVHDFSPFSMFMAADWVVKAVIILLLLASLVSWTIAFVKIIEITLAKRRVRHELRLVLN 74
Query: 66 GQSLETVCKSLKNHHNIG-------LAAIFMSAM-----------------SEWKKSCDK 101
Q+L + SLK G L +++S + +KS
Sbjct: 75 AQTLTRLAASLKESKGAGVFFLKEVLKEVYLSTQQVHFASPEGTSESSGERANTRKSVQT 134
Query: 102 --------------GARSPI-------GIQDRIDRMMDVAIARELEEITEKLSFLGSMSS 140
GA + G+++R+ ++ + + + + L ++ +
Sbjct: 135 LEDILFYEENDQYGGASRDVYVRDVHEGLKERVHSLLSRCLLAAIRRVAYGNAVLATIGA 194
Query: 141 AGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKF 199
VG+ V G+M F IA + + V PGI E+L + +GL V+IP+ + YN
Sbjct: 195 IAPFVGLFATVWGIMNSFIGIAQSQTTRLDVVAPGIAEALFATAMGLFVAIPAVVMYNSL 254
Query: 200 IEDSKKFAMQMEGFANEFSAILSRQTE 226
+ + + A +LSR+ +
Sbjct: 255 MRALNGYRSDLGDIAAALERLLSRELD 281
>gi|209885841|ref|YP_002289698.1| ExbB [Oligotropha carboxidovorans OM5]
gi|209874037|gb|ACI93833.1| ExbB [Oligotropha carboxidovorans OM5]
Length = 308
Score = 68.2 bits (165), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 103/218 (47%), Gaps = 4/218 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S + +FMQ + VK ++ L S+L+W++ K ++++ + + + ++L
Sbjct: 82 DLSPWGMFMQADIVVKLVMIGLAFASLLTWTICFAKLREQYVMQKRLKAALRAVSNSRTL 141
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+L + + L++ A+ E + S G GI++R + E +
Sbjct: 142 AEARMALGSGKTV-LSSFLAMAVHELRMS--SGIVGDAGIKERAASLFAEVTRSEARRMR 198
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCV 188
+ L ++ + VG+ G V G+M F I+ + N+ V PGI E+L++ LGL
Sbjct: 199 LGMGVLATIGATAPFVGLFGTVWGIMNSFIGISKSQTTNLAVVAPGIAEALLATALGLVA 258
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ I YN F ++++ + + +LSR +
Sbjct: 259 AIPAVIIYNHFTRVTRRYMEYVNQASGSAGRLLSRDLD 296
>gi|110180256|gb|ABG54367.1| ExbB [Klebsiella pneumoniae]
Length = 200
Score = 68.2 bits (165), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 93/199 (46%), Gaps = 18/199 (9%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S++ ++ + VK ++ L + S+++W++ K + +R+ + +Q +SL
Sbjct: 9 DLSVWGMYHHADIVVKVVMIGLILASVVTWAIFFGKGAEILASKRRLKREQQQLAEARSL 68
Query: 70 ETV--------CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
+ KSL + A +E + S GA GI++R ++ +
Sbjct: 69 DQASDIASAFEAKSLTTQ-------LINEAQNELELSA--GAEDNEGIKERTGFRLERRV 119
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLI 180
A + +L ++ + VG+ G V G+M F IA + N+ V PGI E+L+
Sbjct: 120 AAVGRHMGRGNGYLATIGAISPFVGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGIAEALL 179
Query: 181 SILLGLCVSIPSSIAYNKF 199
+ +GL +IP+ + YN F
Sbjct: 180 ATAIGLFAAIPAVVIYNIF 198
>gi|323528304|ref|YP_004230456.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. CCGE1001]
gi|323385306|gb|ADX57396.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. CCGE1001]
Length = 250
Score = 68.2 bits (165), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 104/252 (41%), Gaps = 46/252 (18%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
M +YGLA ++ L + I+ LLF+ S+LSW+VI+ K N + ++R +
Sbjct: 1 MQHYGLA-------NVWQSGDLVTRAILCLLFVMSMLSWTVIVVKLWNVLRIKRLTGRTD 53
Query: 61 QLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPI------------- 107
FW S E ++L GL++ A + C A +
Sbjct: 54 AQFWQADSFEHGLQNLG-----GLSSGSGHANHGGRGGCSDEASAAALRDNPLLALAMAA 108
Query: 108 ------------GIQDRID------RMMDVAIARELEEITEKLSFLGSMSSAGLLVGILG 149
+QDRID R + +I + + L+ L S+ S VG+ G
Sbjct: 109 AEAAAHHRDNKPHLQDRIDVSDWIARRLQSSIDDAVAHMQSGLAVLASIGSTAPFVGLFG 168
Query: 150 AVLGMMGFFQSIA--GYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFA 207
V G+ I G S + V+ P + ESLI GL V+IP+ + YN +K
Sbjct: 169 TVWGIYHALIVIGETGQASIDRVAGP-VGESLIMTAFGLFVAIPAVLGYNGLTRANKSIV 227
Query: 208 MQMEGFANEFSA 219
+++ FA+ A
Sbjct: 228 TRLKRFAHGLHA 239
>gi|295097525|emb|CBK86615.1| outer membrane transport energization protein ExbB (TC 2.C.1.1.1)
[Enterobacter cloacae subsp. cloacae NCTC 9394]
Length = 228
Score = 68.2 bits (165), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 92/186 (49%), Gaps = 4/186 (2%)
Query: 16 LFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKS 75
++ + VK ++ L + S+++W++ KS ++ +R+ + ++ +SL+
Sbjct: 1 MYQHADIVVKIVMIGLILASVITWAIFFSKSAELLSQKRRLKREQKQLAEARSLDQASDI 60
Query: 76 LKNHHNIGLAAIFMS-AMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSF 134
+ H L + ++ A +E + S G+ GI++R ++ +A + +
Sbjct: 61 TSSFHAKSLTTLLVNEAQNELELSA--GSEDNEGIKERTGFRLERRVAAVGRHMGRGNGY 118
Query: 135 LGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSS 193
L ++ + VG+ G V G+M F IA + N+ V PGI E+L++ +GL +IP+
Sbjct: 119 LATIGAISPFVGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGIAEALLATAIGLVAAIPAV 178
Query: 194 IAYNKF 199
+ YN F
Sbjct: 179 VIYNIF 184
>gi|209967073|ref|YP_002299988.1| biopolymer transport ExbB protein [Rhodospirillum centenum SW]
gi|209960539|gb|ACJ01176.1| biopolymer transport ExbB protein [Rhodospirillum centenum SW]
Length = 278
Score = 68.2 bits (165), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 94/193 (48%), Gaps = 9/193 (4%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
++ + +FMQ VK ++ L + S+ +W+V+I KSV R R S QSL
Sbjct: 50 LTPWGMFMQADWVVKTVMIGLLLASVATWTVLIAKSVELRRARAVQRAGFASVDSAQSLA 109
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRID---RMMDVAIARELEE 127
++ + LA + +A E + S D + G+++R+ + ++ R +
Sbjct: 110 QAIQAGSREDGV-LAEMTAAASLELRLSADA-LQDVDGVKERVALRLQRIEATAGRRIAV 167
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
T L+ +G+ S +G+ G V G+M F IA + N+ V PGI E+L++ GL
Sbjct: 168 GTGLLATIGATSP---FIGLFGTVWGIMNAFIGIADSKATNLAVVAPGIAEALLATAFGL 224
Query: 187 CVSIPSSIAYNKF 199
+IP+ + YN F
Sbjct: 225 IAAIPAVVIYNHF 237
>gi|330944982|gb|EGH46769.1| TonB system transport protein ExbB2 [Pseudomonas syringae pv. pisi
str. 1704B]
Length = 199
Score = 68.2 bits (165), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 83/166 (50%), Gaps = 7/166 (4%)
Query: 57 REFEQLFWSGQSLETVCKSLKNHH----NIGLAAIFMSAMSEWKKSCDKGARSPIGIQDR 112
R+F + FW+ SL++ + + + LA + + ++ D I QDR
Sbjct: 2 RKFHKRFWAASSLDSAAQLAQEQPGAAARVALAGYAAIQVPDGAQANDLS--QSINHQDR 59
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI 172
++R + I RE + L+ L S+ S +G+ G V G+M + I+ S ++ ++
Sbjct: 60 LERALRQQIVRERRSLETGLAILASIGSTSPFIGLFGTVWGIMSALKGISAAGSASLETV 119
Query: 173 PGII-ESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEF 217
G I +L++ +G+ V++P+ + YN F+ K A ++ FA++F
Sbjct: 120 AGPIGAALVATGVGIAVAVPAVLVYNYFLRRLKLTAADLDDFAHDF 165
>gi|221640392|ref|YP_002526654.1| MotA/TolQ/ExbB proton channel [Rhodobacter sphaeroides KD131]
gi|221161173|gb|ACM02153.1| MotA/TolQ/ExbB proton channel precursor [Rhodobacter sphaeroides
KD131]
Length = 349
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 108/227 (47%), Gaps = 12/227 (5%)
Query: 5 GLAI-MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLF 63
GL I D++ + +F V+ ++ LL S ++W+V++ K V RR+
Sbjct: 119 GLPIPHDLTPWGMFEAAHWVVQAVMILLAAASFVTWTVLLFKLVEIAIARRRLARTAATV 178
Query: 64 WSGQSLETVCKSLKNHHNIGLAAIFMSAMS--EWKKS---CDKGARSPIGIQDRIDRMMD 118
+ +L+ V + L + A FM+ S E ++S D + G+++R+ +++
Sbjct: 179 ETSATLDEVVRRLSGRKD---PAAFMARASFEELQRSDAALDLAGTA--GLKERVRSILE 233
Query: 119 VAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIE 177
A+ E + + L ++ S G VG+ G V G+M F I+ + N+ V PGI E
Sbjct: 234 RVEAQAGERLRRGIGLLATIGSVGPFVGLFGTVWGIMNAFIGISQSQTTNLAVVAPGIAE 293
Query: 178 SLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+L++ LGL +IP+ + YN F+ + + + +LSR
Sbjct: 294 ALLATGLGLVAAIPAVVIYNHFVRSIASWRLSLADAGAAIERMLSRD 340
>gi|206580290|ref|YP_002236568.1| TonB-system energizer ExbB [Klebsiella pneumoniae 342]
gi|238896519|ref|YP_002921259.1| biopolymer transport protein ExbB [Klebsiella pneumoniae
NTUH-K2044]
gi|288933551|ref|YP_003437610.1| tonB-system energizer ExbB [Klebsiella variicola At-22]
gi|206569348|gb|ACI11124.1| TonB-system energizer ExbB [Klebsiella pneumoniae 342]
gi|238548841|dbj|BAH65192.1| TonB-dependent enterochelin uptake/biopolymer transport protein
[Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044]
gi|288888280|gb|ADC56598.1| tonB-system energizer ExbB [Klebsiella variicola At-22]
Length = 243
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 96/202 (47%), Gaps = 24/202 (11%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S++ ++ + VK ++ L + S+++W++ K + +R+ + +Q +SL
Sbjct: 9 DLSVWGMYHHADIVVKVVMIGLILASVVTWAIFFGKGAEILASKRRLKREQQQLAEARSL 68
Query: 70 ETV--------CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMD--- 118
+ KSL + A +E + S GA GI++R ++
Sbjct: 69 DQASDIASAFEAKSLTTQ-------LINEAQNELELSA--GAEDNEGIKERTGFRLERRV 119
Query: 119 VAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIE 177
A+ R + L+ +G++S VG+ G V G+M F IA + N+ V PGI E
Sbjct: 120 AAVGRHMGRGNGYLATIGAISP---FVGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGIAE 176
Query: 178 SLISILLGLCVSIPSSIAYNKF 199
+L++ +GL +IP+ + YN F
Sbjct: 177 ALLATAIGLFAAIPAVVIYNIF 198
>gi|134293914|ref|YP_001117650.1| MotA/TolQ/ExbB proton channel [Burkholderia vietnamiensis G4]
gi|134137071|gb|ABO58185.1| outer membrane transport energization protein ExbB [Burkholderia
vietnamiensis G4]
Length = 601
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 97/213 (45%), Gaps = 31/213 (14%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLA 85
+IT+L +++SW V+ K+ T+ + + F Q F + + H +GLA
Sbjct: 381 VVITILLGMALVSWVVMWTKARYVGTVDKANQYFVQRF----------REVAGRHLVGLA 430
Query: 86 AI------------------FMSAMSEWKKSCDKGARSPIGIQ--DRIDRMMDVAIAREL 125
+ + + + E D R+ I + + I MD + RE
Sbjct: 431 HVDEASADGRRLYQSSLYRLYKAGVHEIHSRVDGNGRTVITSESIEAIRASMDATLVREN 490
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILL 184
+ +++ + L S G +G+LG V+G+M F +IA NV +I PGI +L++ +
Sbjct: 491 QRLSKSMVLLTIAISGGPFLGLLGTVVGVMITFAAIAAAGDVNVNAIAPGIAAALLATVT 550
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEF 217
GL V+IP+ YN + +K M+ F +EF
Sbjct: 551 GLFVAIPALFGYNYLLIRNKNVTANMQVFVDEF 583
>gi|302382824|ref|YP_003818647.1| MotA/TolQ/ExbB proton channel [Brevundimonas subvibrioides ATCC
15264]
gi|302193452|gb|ADL01024.1| MotA/TolQ/ExbB proton channel [Brevundimonas subvibrioides ATCC
15264]
Length = 293
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 106/223 (47%), Gaps = 7/223 (3%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
I+ ++F L VK ++ L + SI SW+++ K + + L R+ F + F + +++
Sbjct: 68 ITPVSMFNDATLVVKVVMIGLLLASIFSWALLFIKLLEYGGLNRKTDRFLEEFRATRTIA 127
Query: 71 TVCKSLKNHHNIG--LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ + + G LA + +A E + S G +D A+A +
Sbjct: 128 DMRRVATSDEYDGNPLADMAAAATEEVELSRQAGLSVTGDHRDSALFRAQSAVAAVQAGL 187
Query: 129 TEKLS----FLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISIL 183
+LS FL S+ S G VG+ G V G+M F I + N+ ++ PGI E+L++
Sbjct: 188 AARLSGGQQFLASVGSTGPFVGLFGTVYGIMNSFIGIVESNTTNLAAVAPGIAEALLATG 247
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+GL +IP+ + YN F + + +GFA E +SRQ +
Sbjct: 248 IGLFAAIPAVVFYNYFNTRISAYGTRSDGFAAELLNGISRQLD 290
>gi|30248370|ref|NP_840440.1| MotA/TolQ/ExbB proton channel family protein [Nitrosomonas europaea
ATCC 19718]
gi|30138256|emb|CAD84264.1| MotA/TolQ/ExbB proton channel family [Nitrosomonas europaea ATCC
19718]
Length = 266
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 97/190 (51%), Gaps = 7/190 (3%)
Query: 39 WSVIIQKSVNFITLRRQFREFEQLFWSGQS---LETVCKSLK-NHHNIGLAAIFMSAMSE 94
W +I+ KS++ R+ F + FW+ + LET +++ NH I LA + ++
Sbjct: 34 WYLIVTKSISNTIASRRANAFLKHFWNIDTIPQLETEIRTMTGNHAFIQLAKTALGVTTD 93
Query: 95 WKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGM 154
+K + + GI + + R + ++ +E I L+ + S SA +G+ G V G+
Sbjct: 94 SQKHGLEKLAAAGGINELLTRSLRNSLDQEAARIENGLTIIASAGSAAPYIGLFGTVWGI 153
Query: 155 MGFFQSI--AGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEG 212
I +G + + V+ P + E+LI LGL V+IP+ +A+N F ++ + Q++
Sbjct: 154 YHALIQIGLSGQGTLDKVAGP-VGEALIMTALGLAVAIPAVLAFNAFTRRNRLWMAQLDS 212
Query: 213 FANEFSAILS 222
FA++ IL+
Sbjct: 213 FAHDLYTILT 222
>gi|325520277|gb|EGC99435.1| transport protein [Burkholderia sp. TJI49]
Length = 236
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 93/198 (46%), Gaps = 6/198 (3%)
Query: 24 VKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL-ETVCKSLKNHHNI 82
V+ + LL IFS+++W++I+ K++ + + R + + F + S E N
Sbjct: 10 VQGALWLLVIFSVVTWTLIVVKAIQSLRASARNRRYTKAFRAANSFQEAAALDGANSPAS 69
Query: 83 GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI--ARELEEITEKLSFLGSMSS 140
LAA + + D ++R + I AR EE L+ L S+ S
Sbjct: 70 ELAATGFDVLRRADEGSAHDLEHSWNRHDLLERHLRQQIQHARRREE--AGLAVLASIGS 127
Query: 141 AGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCVSIPSSIAYNKF 199
VG+ G V G++ +I S ++ + G I E+L++ +G+ V++P+ +AYN F
Sbjct: 128 TAPFVGLFGTVFGIIHALTAITHSASASIDVVAGPIGEALVATGIGIAVAVPAVLAYNFF 187
Query: 200 IEDSKKFAMQMEGFANEF 217
+ K + ++ FA +F
Sbjct: 188 VRRVKAASADLDAFATDF 205
>gi|167840957|ref|ZP_02467641.1| MotA/TolQ/ExbB proton channel [Burkholderia thailandensis MSMB43]
Length = 286
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 103/228 (45%), Gaps = 25/228 (10%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YGL AL+ + ++ LL + S+ SW ++I K + + R+ + ++
Sbjct: 57 NPYGLG-------ALWKNGDFVARFVLLLLVVMSMGSWYIMITKFLEQLRAYRRAKVADE 109
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDR--MMDV 119
WS SL K L A + + + G + + +DR +DV
Sbjct: 110 QLWSAPSLAEGAKRLDEASPFRFIA---------ETAIEAGEHHDEALLEAVDRNTWIDV 160
Query: 120 AIARELEEITEK----LSFLGSMSSAGLLVGILGAVLGMMGFFQS--IAGYYSNNVVSIP 173
++ R + ++ + L+FLG++ S VG+ G V G+ + IAG S + V+ P
Sbjct: 161 SVERAITNVSNRLQDGLAFLGTVGSTAPFVGLFGTVWGIYHALTAIGIAGQASIDKVAGP 220
Query: 174 GIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+ E+LI +GL V++P+ + YN + +K ++ F + +L
Sbjct: 221 -VGEALIMTAIGLAVAVPAVLGYNFLVRRNKSVMERVRNFGAQLHTVL 267
>gi|319780847|ref|YP_004140323.1| tonB-system energizer ExbB [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317166735|gb|ADV10273.1| tonB-system energizer ExbB [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 323
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 97/197 (49%), Gaps = 13/197 (6%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S + +FM + VK ++ L S+++W++ + KS+ + + R + +L
Sbjct: 93 DLSPWGMFMAADIVVKAVMIGLAFASLVTWTIWLAKSLELFGGKLRIRRAVRAIGEAATL 152
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPI---GIQDRIDRMM---DVAIAR 123
+ +L G A+ + A E + + GA + G+++R+ + + A AR
Sbjct: 153 KQAGSTLDRSGGPG--ALLVRAAEE-ETALSAGALDHVSGDGLKERVTSRLSRIEAAAAR 209
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISI 182
+ T L+ +GS + VG+ G V G+M F I+ + N+ V PGI E+L++
Sbjct: 210 RMSRGTGVLATIGSTAP---FVGLFGTVWGIMNAFIGISQAQTTNLAVVAPGIAEALLAT 266
Query: 183 LLGLCVSIPSSIAYNKF 199
+GL +IP+ + YN F
Sbjct: 267 AMGLVAAIPAVVIYNVF 283
>gi|194367082|ref|YP_002029692.1| tonB-system energizer ExbB [Stenotrophomonas maltophilia R551-3]
gi|194349886|gb|ACF53009.1| tonB-system energizer ExbB [Stenotrophomonas maltophilia R551-3]
Length = 242
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 94/194 (48%), Gaps = 12/194 (6%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
++ + +++ + VK ++ L + S+ +W+V++ K RQ R L SL
Sbjct: 14 LTPWGMYLAADVVVKTVMIALALASLATWTVLLAKGWELARQARQLRAARALLLQAPSLP 73
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRI-DRMMDVAIARELEEIT 129
+ LA + +A +E + S + +R G ++R+ R+ + ELE
Sbjct: 74 SESADASVQQGTALA-MLDAARTELRLSQELDSRD--GTKERVASRLGRI----ELETAR 126
Query: 130 EKLSFLGSMSSAGLL---VGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLG 185
+ +G ++S G + VG+ G V G+M F IA + N+ V PGI E+L++ LG
Sbjct: 127 VQRRGIGVLASIGAVAPFVGLFGTVWGIMNSFIGIAHSNTTNLAVVAPGIAEALLATALG 186
Query: 186 LCVSIPSSIAYNKF 199
L +IP+ + YN F
Sbjct: 187 LVAAIPAVLVYNHF 200
>gi|260774731|ref|ZP_05883634.1| biopolymer transport protein ExbB [Vibrio coralliilyticus ATCC
BAA-450]
gi|260609293|gb|EEX35445.1| biopolymer transport protein ExbB [Vibrio coralliilyticus ATCC
BAA-450]
Length = 264
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 97/218 (44%), Gaps = 4/218 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S + ++ VK ++ LL + S ++W++ I K + RR+ R ++L
Sbjct: 37 DMSPYGMYQSADWVVKAVMILLLVASGVTWAIGIAKQIQLNLARRRARHILNELLDSETL 96
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+ GLA I +E + + A + GI++R+ ++ A +
Sbjct: 97 VEGKLRCDSAEGAGLALI---EATEKELALSARADNEDGIKERLQLRLERVQAGLSSAMV 153
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCV 188
L ++ S G VG+ G V G+M F IA + + V PGI E+L++ +GL
Sbjct: 154 GGTGVLATVGSVGPFVGLFGTVWGIMNAFIGIAKSQNTTLAVVAPGIAEALLATAIGLVA 213
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ + YN F ++ M + ++SR +
Sbjct: 214 AIPAVVLYNHFTRGVSQYRALMADISAALMVLVSRDLD 251
>gi|152971943|ref|YP_001337052.1| biopolymer transport protein ExbB [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|262042318|ref|ZP_06015483.1| TonB system transporter ExbB [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|290511390|ref|ZP_06550759.1| tonB-system energizer ExbB [Klebsiella sp. 1_1_55]
gi|330008854|ref|ZP_08306316.1| tonB-system energizer ExbB [Klebsiella sp. MS 92-3]
gi|150956792|gb|ABR78822.1| hypothetical protein KPN_03426 [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|259040382|gb|EEW41488.1| TonB system transporter ExbB [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|289776383|gb|EFD84382.1| tonB-system energizer ExbB [Klebsiella sp. 1_1_55]
gi|328535054|gb|EGF61576.1| tonB-system energizer ExbB [Klebsiella sp. MS 92-3]
Length = 238
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 96/202 (47%), Gaps = 24/202 (11%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S++ ++ + VK ++ L + S+++W++ K + +R+ + +Q +SL
Sbjct: 4 DLSVWGMYHHADIVVKVVMIGLILASVVTWAIFFGKGAEILASKRRLKREQQQLAEARSL 63
Query: 70 ETV--------CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMD--- 118
+ KSL + A +E + S GA GI++R ++
Sbjct: 64 DQASDIASAFEAKSLTTQ-------LINEAQNELELSA--GAEDNEGIKERTGFRLERRV 114
Query: 119 VAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIE 177
A+ R + L+ +G++S VG+ G V G+M F IA + N+ V PGI E
Sbjct: 115 AAVGRHMGRGNGYLATIGAISP---FVGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGIAE 171
Query: 178 SLISILLGLCVSIPSSIAYNKF 199
+L++ +GL +IP+ + YN F
Sbjct: 172 ALLATAIGLFAAIPAVVIYNIF 193
>gi|77464499|ref|YP_354003.1| biopolymer transport protein, ExbB [Rhodobacter sphaeroides 2.4.1]
gi|77388917|gb|ABA80102.1| Biopolymer transport protein, ExbB [Rhodobacter sphaeroides 2.4.1]
Length = 349
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 108/229 (47%), Gaps = 12/229 (5%)
Query: 5 GLAI-MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLF 63
GL I D++ + +F V+ ++ LL S ++W+V++ K V RR+
Sbjct: 119 GLPIPHDLTPWGMFEAAHWVVQAVMILLAAASFVTWTVLLFKLVEIAIARRRLARTAATV 178
Query: 64 WSGQSLETVCKSLKNHHNIGLAAIFMSAMS--EWKKS---CDKGARSPIGIQDRIDRMMD 118
+ +LE + L + A FM+ S E ++S D + G+++R+ +++
Sbjct: 179 ETSATLEEAVRRLAGRKD---PAAFMARASFEELQRSDAALDLAGTA--GLKERVRSILE 233
Query: 119 VAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIE 177
A+ E + + L ++ S G VG+ G V G+M F I+ + N+ V PGI E
Sbjct: 234 RVEAQAGERLRRGIGLLATIGSVGPFVGLFGTVWGIMNAFIGISQSQTTNLAVVAPGIAE 293
Query: 178 SLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+L++ LGL +IP+ + YN F+ + + + +LSR +
Sbjct: 294 ALLATGLGLVAAIPAVVIYNHFVRSIASWRLSLADAGAAIERMLSRDLD 342
>gi|192292067|ref|YP_001992672.1| tonB-system energizer ExbB [Rhodopseudomonas palustris TIE-1]
gi|192285816|gb|ACF02197.1| tonB-system energizer ExbB [Rhodopseudomonas palustris TIE-1]
Length = 316
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 96/197 (48%), Gaps = 13/197 (6%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S +FM VK ++ L + S LSW++ + K+V + + + + L
Sbjct: 81 DLSPIGMFMAADWVVKAVMIALLLASFLSWTICVAKTVELACANARAKRAFLIVDRSRDL 140
Query: 70 ETVCKSLKNHHNIGLAAIFM--SAMSEWKKSCDKGARS-PIGIQDRI-DRM--MDVAIAR 123
+ L G A+FM SA E +S A S +G+++R+ R+ ++ R
Sbjct: 141 DEAVHRLSKR---GGPAVFMVRSASEELHRSLPVLAYSGEVGLKERVVSRLARIEAQAGR 197
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISI 182
L T L+ +G++S VG+ G V G+M F I+ ++ N+ V PGI E+L++
Sbjct: 198 RLMRGTGLLATVGAVSP---FVGLFGTVWGIMNAFIGISQSHTTNLAVVAPGIAEALLAT 254
Query: 183 LLGLCVSIPSSIAYNKF 199
GL +IP+ I YN F
Sbjct: 255 AFGLVAAIPAVIIYNVF 271
>gi|78061937|ref|YP_371845.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. 383]
gi|77969822|gb|ABB11201.1| outer membrane transport energization protein ExbB [Burkholderia
sp. 383]
Length = 598
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 98/213 (46%), Gaps = 31/213 (14%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLA 85
+IT+L +++SW V+ K+ T+ + + F Q F + + H +GLA
Sbjct: 378 VVITILLGMALVSWIVMWTKARYVGTVDKANQYFVQRF----------REVAGRHLVGLA 427
Query: 86 AI------------------FMSAMSEWKKSCDKGARSPIGIQ--DRIDRMMDVAIAREL 125
+ + + + E D R+ I + + I MD + RE
Sbjct: 428 HVDEASADGRRLYQSSLYRLYKAGVHEIYSRVDNNGRTVITSESIEAIRASMDATLVREN 487
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILL 184
+++++ + L S G +G+LG V+G+M F +IA NV +I PGI +L++ +
Sbjct: 488 QKLSKSMVLLTIAISGGPFLGLLGTVVGVMITFAAIAAAGDVNVNAIAPGIAAALLATVT 547
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEF 217
GL V+IP+ YN + +K M+ F +EF
Sbjct: 548 GLFVAIPALFGYNYLLIRNKNVTANMQVFVDEF 580
>gi|121610019|ref|YP_997826.1| MotA/TolQ/ExbB proton channel [Verminephrobacter eiseniae EF01-2]
gi|121554659|gb|ABM58808.1| MotA/TolQ/ExbB proton channel [Verminephrobacter eiseniae EF01-2]
Length = 239
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 92/212 (43%), Gaps = 14/212 (6%)
Query: 16 LFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKS 75
+++Q + + T+L S+ SW VI+ K+++ I +Q R Q FW +
Sbjct: 10 VWIQGDFVTRAVATMLLAMSLASWIVILLKALDLIRFNKQARA-AQDFWHSEDFAAGLTQ 68
Query: 76 L-KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRID------RMMDVAIARELEEI 128
L + HN F+ E +++ + + D++D R + I +
Sbjct: 69 LGTDPHNP-----FLQLAREGREATAHHRNTQAHLHDQLDMSDWVTRCLRNCIDAFTARL 123
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLC 187
L+ L S+ S +G+ G V G+ SI + + + G I E+LI LGL
Sbjct: 124 QSGLAILASVGSTAPFIGLFGTVWGIYHALLSIGTSGQSTIDKVAGPIGEALIMTALGLA 183
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
V+IP+ + YN + +K + FA++ A
Sbjct: 184 VAIPAVLGYNALVRGNKSILGSLNSFAHDLHA 215
>gi|296446767|ref|ZP_06888706.1| tonB-system energizer ExbB [Methylosinus trichosporium OB3b]
gi|296255770|gb|EFH02858.1| tonB-system energizer ExbB [Methylosinus trichosporium OB3b]
Length = 267
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 103/218 (47%), Gaps = 4/218 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S++++F+ + VK ++ L SI +W+V+I K+V RR+ R + + L
Sbjct: 37 DLSVWSMFVNADIVVKVVMLGLLAASIGTWTVLIAKTVELSRSRRRVRASIERLQEARGL 96
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+L + + +A+ A+ E++ S D A G+++R+ E I
Sbjct: 97 AEARVALGSDDALA-SALIAEALREFRLSSDLSASG--GLKERVASSFAELERAEGLSIR 153
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCV 188
L S+ S G VG+ G V G+M F I+ + N+ V PGI E+L++ +GL
Sbjct: 154 RGTGLLASVGSTGPFVGLFGTVWGIMNSFIGISKAQTTNLAVVAPGIAEALLATAIGLFA 213
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ + YN + + + E ++SR +
Sbjct: 214 AIPAVLIYNHLARQIGAYQELVSNLSGELLRVVSRDID 251
>gi|223938138|ref|ZP_03630035.1| MotA/TolQ/ExbB proton channel [bacterium Ellin514]
gi|223893182|gb|EEF59646.1| MotA/TolQ/ExbB proton channel [bacterium Ellin514]
Length = 244
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 97/201 (48%), Gaps = 8/201 (3%)
Query: 25 KCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGL 84
K II L IFSI++WS +I K++ +R F F + +++ + L
Sbjct: 33 KIIIIFLVIFSIVAWSTMISKALQMRRAKRLNTFFNSEFRNQKNVLGMYDRRLEVEGCPL 92
Query: 85 AAIFMSAMSEWKKSCDKGA-----RSPIGIQ--DRIDRMMDVAIARELEEITEKLSFLGS 137
A++ + E +G +S + I+ + + R ++ +A++ ++ L L
Sbjct: 93 FAVYQAGSIELDTRLKRGVAGEGRKSNLSIKAVEHVKRSLENTVAQQSLKLESGLILLAI 152
Query: 138 MSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCVSIPSSIAY 196
S +G+LG V G+M F IA S ++ ++ PG+ +LI+ + GL V+IPS Y
Sbjct: 153 AVSGAPFLGLLGTVWGVMSTFGGIAREGSASLAAMAPGVSAALITTVAGLLVAIPSMFGY 212
Query: 197 NKFIEDSKKFAMQMEGFANEF 217
N + + + ++++ FA E
Sbjct: 213 NWLVHNLRVLTVELDNFAQEL 233
>gi|182677234|ref|YP_001831380.1| tonB-system energizer ExbB [Beijerinckia indica subsp. indica ATCC
9039]
gi|182633117|gb|ACB93891.1| tonB-system energizer ExbB [Beijerinckia indica subsp. indica ATCC
9039]
Length = 355
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 93/194 (47%), Gaps = 7/194 (3%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S + +F + V+ ++ L S+++W++ I K + + R R + QSL
Sbjct: 118 DLSPWGMFTHADIIVQGVMLGLLFASLVTWTIGIAKCLELMAGDRNARRGLNILSGAQSL 177
Query: 70 ETVCKSLKNHHNIG---LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
+L+ G +A + +A++E ++S A G+++R ++ R
Sbjct: 178 RLADSALEGTLGRGKGVVAKLVSAAIAEAERSQGLPAD---GVKERAAALLSRIEIRASR 234
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLG 185
+T L ++ + G VG+ G V G+M F I+ + N+ V PGI E+L++ G
Sbjct: 235 AMTRGTGLLATIGATGPFVGLFGTVWGIMNSFIGISKSNTTNLAVVAPGIAEALLATACG 294
Query: 186 LCVSIPSSIAYNKF 199
L +IP+ I YN F
Sbjct: 295 LVAAIPAVIIYNVF 308
>gi|124514215|gb|EAY55730.1| putative MotA/TolQ/ExbB proton channel [Leptospirillum rubarum]
gi|206602335|gb|EDZ38816.1| Putative MotA/TolQ/ExbB proton channel [Leptospirillum sp. Group II
'5-way CG']
Length = 223
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 102/215 (47%), Gaps = 13/215 (6%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLR--RQFREFEQLFWSGQS 68
+++F Q+ + ++++L S LSW ++ K +I R ++ R+F F
Sbjct: 1 MTLFNFLSQVSPMAEAVLSVLLFLSALSWGIVFYKL--YIVSRSVKENRQFVMAFKRTDR 58
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDK----GARSPIGIQDRIDRMMDVAIARE 124
+ + + LA IF + + + DK G +S D I R + A E
Sbjct: 59 FSRLYQEAVAYRKSTLAFIFRAGYEKVQALKDKWMVAGGKSSEMDLDVIHRTLLQASQEE 118
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISIL 183
+ L L + ++ VG+LG V G++ F+ I+ S ++ S+ PGI ++L++
Sbjct: 119 QARLEAYLPVLATTANIAPFVGLLGTVWGIIHAFRDISHQASASIASVAPGIADALVTTA 178
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFS 218
GL +IP+ I YN F++ + Q++G A+ F+
Sbjct: 179 AGLFTAIPAVIFYNYFLQKIR----QIQGVADTFT 209
>gi|13473530|ref|NP_105098.1| exbB, uptake of enterochelin; tonB-dependent uptake of B colicins
[Mesorhizobium loti MAFF303099]
gi|14024280|dbj|BAB50884.1| ExbB [Mesorhizobium loti MAFF303099]
Length = 249
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 98/198 (49%), Gaps = 15/198 (7%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S + +F+ + VK ++ L S+++W++ + KS+ + + + R + +L
Sbjct: 19 DLSPWGMFIAADIIVKAVMIGLAFASLVTWTIWLAKSLEILGGKLRIRRAVRAIGDAATL 78
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIG-------IQDRIDRMMDVAIA 122
+ ++L G A+ + A E + + GA +G + R+ R+ + A +
Sbjct: 79 KQASRALGRSGGPG--ALLVKAAEE-ETALSAGALDHVGGDGLKERVTSRLSRI-EAAAS 134
Query: 123 RELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLIS 181
R + T L+ +GS + VG+ G V G+M F I+ + N+ V PGI E+L++
Sbjct: 135 RRMSRGTGVLATIGSTAP---FVGLFGTVWGIMNAFIGISQAQTTNLAVVAPGIAEALLA 191
Query: 182 ILLGLCVSIPSSIAYNKF 199
+GL +IP+ + YN F
Sbjct: 192 TAMGLVAAIPAVVIYNVF 209
>gi|167588865|ref|ZP_02381253.1| MotA/TolQ/ExbB proton channel [Burkholderia ubonensis Bu]
Length = 265
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 103/228 (45%), Gaps = 25/228 (10%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YGL AL+ + +++LL I S+ SW ++I K + R+ + ++
Sbjct: 34 NPYGLG-------ALWKNGDFVARFVLSLLVIMSMGSWYIMIAKFLEQFRANRRAKLADE 86
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDR--MMDV 119
WS SL K L + A + + + G + + +DR +DV
Sbjct: 87 QLWSAPSLSDGAKLLDDASPFRFIA---------ETAIEAGEHHDEALLEAVDRNTWIDV 137
Query: 120 AIARELEEITEK----LSFLGSMSSAGLLVGILGAVLGMMGFFQS--IAGYYSNNVVSIP 173
++ R + ++ + L+FL ++ S VG+ G V G+ + IAG S + V+ P
Sbjct: 138 SVERAITNVSNRLQDGLAFLATVGSTAPFVGLFGTVWGIYHALTAIGIAGQASIDKVAGP 197
Query: 174 GIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+ E+LI +GL V++P+ + YN + +K ++ F + +L
Sbjct: 198 -VGEALIMTAIGLAVAVPAVLGYNFLVRRNKSVMERVRNFGAQLHTVL 244
>gi|319944465|ref|ZP_08018739.1| TonB family auxiliary protein ExbB [Lautropia mirabilis ATCC 51599]
gi|319742426|gb|EFV94839.1| TonB family auxiliary protein ExbB [Lautropia mirabilis ATCC 51599]
Length = 244
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 99/216 (45%), Gaps = 7/216 (3%)
Query: 14 FALFMQMGLAV-KCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
FA F+ G V K ++ +L S++SW++I+ K + + F ++FW S++ V
Sbjct: 9 FAHFLAQGDFVSKALLVILLGMSVVSWTLILVKGITHFIRSSRAERFLKMFWEAPSMQAV 68
Query: 73 CKSLKNH--HNI--GLAAIFMSAMSEWKKSCDKGARSPIGI-QDRIDRMMDVAIARELEE 127
K + H H+ + A + A+ + ++ + G D + R + + E
Sbjct: 69 AKDIAAHGVHDPFSRVTANALQAIQHYARTAPSNRMADAGTAADLLTRTIKKVLDEETVR 128
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGL 186
+ LS L ++ + G+ G V G+ +I S ++ + G + E+LI LGL
Sbjct: 129 LENGLSVLATVGATAPFFGLFGTVWGVYHALVNIGLSGSGSLDKVAGPVGEALIMTGLGL 188
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
V++P+ I +N ++ +++ FA E LS
Sbjct: 189 AVALPAVIGFNWLTRRNRVLTARLDAFAFELFTFLS 224
>gi|307129122|ref|YP_003881138.1| membrane spanning protein in TonB-ExbB-ExbD complex [Dickeya
dadantii 3937]
gi|306526651|gb|ADM96581.1| membrane spanning protein in TonB-ExbB-ExbD complex [Dickeya
dadantii 3937]
Length = 312
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/191 (21%), Positives = 94/191 (49%), Gaps = 2/191 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S++ ++ + VK ++ L + S+++W++ KS + + +++ R Q ++L
Sbjct: 77 DLSVWGMYQHADVVVKTVMIGLLLASVVTWAIFFGKSTSLMGAKKRIRREYQALEDARTL 136
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+ + G ++ + A + ++ + + GI++R + +A ++
Sbjct: 137 DDAL-DISGVFKPGSVSLQLLADARNEQELSERSDDNNGIKERTAFRFERRVAATGRQMG 195
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCV 188
+L ++ + +G+ G V G+M F IA + N+ V PGI E+L++ +GL
Sbjct: 196 RGTGYLATVGAIAPFIGLFGTVWGIMNSFIGIAQSQTTNLAVVAPGIAEALLATAIGLVA 255
Query: 189 SIPSSIAYNKF 199
+IP+ + YN F
Sbjct: 256 AIPAVVIYNVF 266
>gi|119896523|ref|YP_931736.1| putative biopolymer transport protein ExbB [Azoarcus sp. BH72]
gi|119668936|emb|CAL92849.1| putative biopolymer transport protein ExbB [Azoarcus sp. BH72]
Length = 280
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 100/222 (45%), Gaps = 15/222 (6%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YGL AL+ K ++ L+ I S SW +II K + + RQ + E
Sbjct: 65 NPYGLE-------ALWAGSDAVAKVVLVLMIIMSAGSWYIIIVKLIEQTRMYRQAKAVEG 117
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
+ W +++ ++L+N G F++ + + + D + + AI
Sbjct: 118 V-WKSATIKHGAENLEN----GSPFRFIAEAGLEATNRHDSLLEHVDLNDWVTLSIHRAI 172
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESL 179
+ + L+FL ++ S VG+ G V G+ +I AG S + V+ P + E+L
Sbjct: 173 EKVQSRMQNGLAFLATVGSTAPFVGLFGTVWGIYHALTAIGIAGQASIDKVAGP-VGEAL 231
Query: 180 ISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
I +GL V++P+ + YN + +K Q+ GF NE ++
Sbjct: 232 IMTAIGLAVAVPAVLGYNWLVRRNKGVMDQVRGFGNELHTVI 273
>gi|171058621|ref|YP_001790970.1| MotA/TolQ/ExbB proton channel [Leptothrix cholodnii SP-6]
gi|170776066|gb|ACB34205.1| MotA/TolQ/ExbB proton channel [Leptothrix cholodnii SP-6]
Length = 263
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 109/232 (46%), Gaps = 26/232 (11%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YGLA AL+ + K ++ L+ + S SW VI+ K + + RQ +E +
Sbjct: 45 NPYGLA-------ALWAGSDVVAKIVLMLMTVMSAGSWYVIVVKLLEQARVGRQAQEAQD 97
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRID--RMMDV 119
FW + +L ++G F++ ++ + +R G+ +ID + +
Sbjct: 98 RFWRAGDVRQGADAL----SVGSPFRFIA------EAGAEASRKHDGLLGQIDLNTWVTM 147
Query: 120 AIARELEEITEKL----SFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIP 173
+I R +E + +L +FL ++ S VG+ G V G+ +I AG S + V+ P
Sbjct: 148 SIQRAVERVHSRLQGGLAFLATVGSTAPFVGLFGTVWGIYHALTAIGVAGQASIDKVAGP 207
Query: 174 GIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+ E+LI +GL V++P+ + YN + +K + F ++ A+L Q
Sbjct: 208 -VGEALIMTAIGLAVAVPAVLGYNWLVRRNKVAMDDVRAFGSDLHAVLLAQA 258
>gi|307823253|ref|ZP_07653483.1| MotA/TolQ/ExbB proton channel [Methylobacter tundripaludum SV96]
gi|307736028|gb|EFO06875.1| MotA/TolQ/ExbB proton channel [Methylobacter tundripaludum SV96]
Length = 221
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 97/197 (49%), Gaps = 6/197 (3%)
Query: 31 LFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE---TVCKSLKNHHNIGLAAI 87
L FS+++W++I+ K F R F ++FW +LE T+ + +A
Sbjct: 18 LLAFSVVTWTLILFKIWQFTKNSFYNRAFNKVFWDAANLEQAKTLPAEIARGPQARIAQQ 77
Query: 88 FMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGI 147
+ MSE ++S + + + ++ + V + +E + L+ L S+ S VG+
Sbjct: 78 GFAWMSESQQSEGQSLKYRGVPSELLEHSLLVQMQQEQHAMESGLTMLASIGSTSPFVGL 137
Query: 148 LGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKK 205
G VLG+M I +G S +VV+ P I ++L++ +G+ V++P+ +AYN F+ K+
Sbjct: 138 FGTVLGIMHAMHEITASGSTSLDVVAGP-IGDALVATAIGIAVAVPAVLAYNFFLRRVKQ 196
Query: 206 FAMQMEGFANEFSAILS 222
+E F F I S
Sbjct: 197 QRAGLENFVVSFMHIAS 213
>gi|27382184|ref|NP_773713.1| biopolymer transport protein [Bradyrhizobium japonicum USDA 110]
gi|27355354|dbj|BAC52338.1| biopolymer transport protein [Bradyrhizobium japonicum USDA 110]
Length = 261
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 114/227 (50%), Gaps = 23/227 (10%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
++S + +F+ + VK ++ L + S+++W+V + K+V LRR+ Q ++L
Sbjct: 37 NLSPWGMFLGADIIVKTVMIGLAVASVVTWTVWLAKTVE---LRRKSALAVQ---RTRAL 90
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQD---------RIDRMMDVA 120
E K + G A A+++ +SC K A GI D R++R+ + A
Sbjct: 91 EGRMKLAEAAERTGDA---HDAVAQLIQSCAKEAELSGGIVDDGLQERVALRLERV-EAA 146
Query: 121 IARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESL 179
++R++ T L+ +G+ + VG+ G V G+M F I+ ++ ++ V PGI E+L
Sbjct: 147 MSRQIARGTGVLATIGATAP---FVGLFGTVWGIMNAFIGISESHTTSLAVVAPGIAEAL 203
Query: 180 ISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
++ LGL +IP+ + YN + + + + + ++SRQ +
Sbjct: 204 LATALGLVAAIPAVVIYNHLVRGIANYRALLGDASAQLMLLVSRQRD 250
>gi|213580960|ref|ZP_03362786.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Typhi str. E98-0664]
Length = 161
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 77/150 (51%), Gaps = 2/150 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
++I LF++ L VK I+ +L FSI SW++IIQ++ R+ FE FWSG L
Sbjct: 1 MNILDLFLKASLLVKLIMLILIGFSIASWAIIIQRTRILNAAAREAEAFEDKFWSGIELS 60
Query: 71 TVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ + + + G IF S E+ + + +P + + R M +++ RELE +
Sbjct: 61 RLYQESQGRRDSLSGSEQIFYSGFKEFVRLHRANSHAPEAVVEGASRAMRISMNRELETL 120
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFF 158
+ FLG++ S +G+ G V G+M F
Sbjct: 121 ETHIPFLGTVGSISPYIGLFGTVWGIMHAF 150
>gi|170690046|ref|ZP_02881213.1| MotA/TolQ/ExbB proton channel [Burkholderia graminis C4D1M]
gi|170144481|gb|EDT12642.1| MotA/TolQ/ExbB proton channel [Burkholderia graminis C4D1M]
Length = 238
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 103/242 (42%), Gaps = 38/242 (15%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
M +YGLA ++ + I+ +LFI SILSW+VI+ K + + ++R +
Sbjct: 1 MQHYGLA-------NVWQSGDFITRAILGILFIMSILSWTVIVVKLWHVLRIKRVTGRTD 53
Query: 61 QLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKS---------------CDKGARS 105
FW + E ++L GLA A +E + + R
Sbjct: 54 AQFWQADNFEHGLRNLG-----GLAGHGSEASAEALRDNPLLALAMAASEAAAHHRDTRP 108
Query: 106 PIGIQDRID------RMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQ 159
+QDRID R + +I + + L+ L S+ S VG+ G V G+
Sbjct: 109 H--LQDRIDVSDWIARRLQGSIDDAVAHMQSGLAVLASIGSTAPFVGLFGTVWGIYHALI 166
Query: 160 SIA--GYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEF 217
I G S + V+ P + ESLI GL V+IP+ + YN +K +++ FA+
Sbjct: 167 VIGETGQASIDHVAGP-VGESLIMTAFGLFVAIPAVLGYNGLTRANKSIVTRLKRFAHGL 225
Query: 218 SA 219
A
Sbjct: 226 HA 227
>gi|319792735|ref|YP_004154375.1| mota/tolq/exbb proton channel [Variovorax paradoxus EPS]
gi|315595198|gb|ADU36264.1| MotA/TolQ/ExbB proton channel [Variovorax paradoxus EPS]
Length = 238
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 91/208 (43%), Gaps = 6/208 (2%)
Query: 16 LFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKS 75
++ Q K + LL S+ SW VII K+++ I +R + Q FW + T
Sbjct: 10 VWNQGDFVTKAVAVLLIGMSLASWIVIIVKALDVIKYKRLAKN-SQDFWHSEDFATALNK 68
Query: 76 LKNHHNIGLAAIFMSA--MSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLS 133
L + A+ + + ++ + + D I R + I + L+
Sbjct: 69 LGKDDSNPFRALALEGREAAAHHRNTKAHLHDALDVSDWITRALRNGIDAFTARLQTGLA 128
Query: 134 FLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGLCVSIP 191
L S+ S +G+ G V G+ SI AG + + V+ P I E+LI LGL V+IP
Sbjct: 129 ILASVGSTAPFIGLFGTVWGIYHALMSIGSAGQATIDKVAGP-IGEALIMTALGLAVAIP 187
Query: 192 SSIAYNKFIEDSKKFAMQMEGFANEFSA 219
+ + YN + +K ++ FA++ A
Sbjct: 188 AVLGYNALVRGNKFVLTKLNSFAHDLHA 215
>gi|14041207|emb|CAC38749.1| ExbB protein [Bradyrhizobium japonicum]
Length = 258
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 114/227 (50%), Gaps = 23/227 (10%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
++S + +F+ + VK ++ L + S+++W+V + K+V LRR+ Q ++L
Sbjct: 34 NLSPWGMFLGADIIVKTVMIGLAVASVVTWTVWLAKTVE---LRRKSALAVQ---RTRAL 87
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQD---------RIDRMMDVA 120
E K + G A A+++ +SC K A GI D R++R+ + A
Sbjct: 88 EGRMKLAEAAERTGDA---HDAVAQLIQSCAKEAELSGGIVDDGLQERVALRLERV-EAA 143
Query: 121 IARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESL 179
++R++ T L+ +G+ + VG+ G V G+M F I+ ++ ++ V PGI E+L
Sbjct: 144 MSRQIARGTGVLATIGATAP---FVGLFGTVWGIMNAFIGISESHTTSLAVVAPGIAEAL 200
Query: 180 ISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
++ LGL +IP+ + YN + + + + + ++SRQ +
Sbjct: 201 LATALGLVAAIPAVVIYNHLVRGIANYRALLGDASAQLMLLVSRQRD 247
>gi|262373303|ref|ZP_06066582.1| TolQ [Acinetobacter junii SH205]
gi|262313328|gb|EEY94413.1| TolQ [Acinetobacter junii SH205]
Length = 291
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 105/232 (45%), Gaps = 33/232 (14%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YGL AL+ + L K + +L + SI +W +I+ K ++R E E+
Sbjct: 66 NPYGLE-------ALWREGDLVAKTTLFILVLMSIGTWYIILSKLFQQSKIKRHGTEAER 118
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIG----IQDRID--R 115
FW +L + +SL S ++ +KG S + +RID
Sbjct: 119 NFWEADTLNSAKESL-------------DPSSTYRYIAEKGIHSTKHHDGTLLERIDFNT 165
Query: 116 MMDVAIARELEEITEK----LSFLGSMSSAGLLVGILGAVLGMMGFFQS--IAGYYSNNV 169
+ ++I R ++++ L+FL ++ S VG+ G V G+ + I+G S +
Sbjct: 166 WVTISIQRAIDKVQSHLGNGLAFLATVGSTAPFVGLFGTVWGIYHALTAIGISGQASIDK 225
Query: 170 VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
V+ P + E+LI +GL V++P+ + YN +K + F ++ A+L
Sbjct: 226 VAGP-VGEALIMTAIGLAVAVPAVLGYNWLTRRNKAVMDNVRSFGSDLHAVL 276
>gi|242240997|ref|YP_002989178.1| tonB-system energizer ExbB [Dickeya dadantii Ech703]
gi|242133054|gb|ACS87356.1| tonB-system energizer ExbB [Dickeya dadantii Ech703]
Length = 304
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 94/200 (47%), Gaps = 18/200 (9%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
MD+S+ ++ + VK ++ L + S+++W++ + KS + ++ + + R +
Sbjct: 68 MDLSVMGMYQHADVVVKTVMIGLVVASVITWAIFLSKSASLMSAKNRIRREHLALEDAST 127
Query: 69 LETVCKSLKNHHNIGLAAIF------MSAMSEWKKSCDKGARSPI--GIQDRIDRMMDVA 120
L+ +AA+F + + + + ARS GI++R +
Sbjct: 128 LDDAAD---------IAAVFKPGSVALQLLDDARNEQMLSARSDDNNGIKERTAFRFERR 178
Query: 121 IARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESL 179
+A ++ +L ++ + +G+ G V G+M F IA + N+ V PGI E+L
Sbjct: 179 VAATGRQMGRGTGYLATVGAIAPFIGLFGTVWGIMNSFIGIAHTQTTNLAVVAPGIAEAL 238
Query: 180 ISILLGLCVSIPSSIAYNKF 199
++ +GL +IP+ + YN F
Sbjct: 239 LATAIGLIAAIPAVVIYNIF 258
>gi|239814812|ref|YP_002943722.1| MotA/TolQ/ExbB proton channel [Variovorax paradoxus S110]
gi|239801389|gb|ACS18456.1| MotA/TolQ/ExbB proton channel [Variovorax paradoxus S110]
Length = 238
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 91/208 (43%), Gaps = 6/208 (2%)
Query: 16 LFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKS 75
++ Q K + LL S+ SW VII K+++ I +R + Q FW + T
Sbjct: 10 VWNQGDFVTKAVALLLIGMSLASWIVIIIKALDVIKYKR-LAKHSQDFWHSEDFATALNK 68
Query: 76 LKNHHNIGLAAIFMSA--MSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLS 133
L + A+ + + ++ + + D I R + I + L+
Sbjct: 69 LGKDDSNPFRALALEGREAAAHHRNTKAHLHDALDVSDWITRALRNGIDAFTARLQTGLA 128
Query: 134 FLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGLCVSIP 191
L S+ S +G+ G V G+ SI AG + + V+ P I E+LI LGL V+IP
Sbjct: 129 ILASVGSTAPFIGLFGTVWGIYHALMSISTAGQATIDKVAGP-IGEALIMTALGLAVAIP 187
Query: 192 SSIAYNKFIEDSKKFAMQMEGFANEFSA 219
+ + YN + +K ++ FA++ A
Sbjct: 188 AVLGYNALVRGNKFVLTKLNSFAHDLHA 215
>gi|221069917|ref|ZP_03546022.1| MotA/TolQ/ExbB proton channel [Comamonas testosteroni KF-1]
gi|220714940|gb|EED70308.1| MotA/TolQ/ExbB proton channel [Comamonas testosteroni KF-1]
Length = 219
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 87/202 (43%), Gaps = 3/202 (1%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLA 85
L+ + S+LSW VI+ K RR + +FW L ++ GL
Sbjct: 18 ATAALMLLMSVLSWVVILYKLWFMAAARRSVPQAVAVFWQMPDLTQALAQVRARDRQGLV 77
Query: 86 AIFMSAMSEWKKSCDKGARSPIGIQD-RIDRMMDVAIARELEEITEKLSFLGSMSSAGLL 144
A+ + D+G+ D R+ R + A+ + ++ + L ++ +
Sbjct: 78 QPMAVAVEQ-GSGADQGSLEQRAAPDQRLMRRLREALGQASTQLQWGQTLLATIGATAPF 136
Query: 145 VGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCVSIPSSIAYNKFIEDS 203
VG+LG V G+ ++AG + + G + E+L+ GL V++P+ +AYN +
Sbjct: 137 VGLLGTVWGIHHALGTLAGSGQVEIAQLAGPVGEALVMTAAGLAVALPAVLAYNLLGRSA 196
Query: 204 KKFAMQMEGFANEFSAILSRQT 225
+ +EGFA++ A Q
Sbjct: 197 SQLEAVLEGFAHDLHAQFGAQA 218
>gi|34495854|ref|NP_900069.1| exbB-like biopolymer transport [Chromobacterium violaceum ATCC
12472]
gi|34101709|gb|AAQ58077.1| probable exbB-like biopolymer transport [Chromobacterium violaceum
ATCC 12472]
Length = 225
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 110/223 (49%), Gaps = 6/223 (2%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+++ +F Q + + +L + S+L+W +II + V ++LRR RE E W
Sbjct: 1 MNVLTVFQQGDAVLISVFMILILMSVLTWYLIIVRGVQTLSLRRANREAENALWGAADWR 60
Query: 71 TVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
SL++ LA ++A+ +++ + G+ + + R + A+++E+
Sbjct: 61 QAEASLQHSQGQFANLARAGLAALKQYQGQAGRALGQACGVDEFLTRAIRRALSQEMARQ 120
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGL 186
L+ L S+ S VG+ G V G+ +I AG S V+ P I E+L++ GL
Sbjct: 121 ESGLTVLASIGSTAPFVGLFGTVWGIYHALVNIGHAGQMSIGAVAGP-IGEALVATAAGL 179
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA-ILSRQTEGN 228
+IP+ +AYN + + +++ FA++ A +L++ +G+
Sbjct: 180 AAAIPAVLAYNALTRAQRVMSQELDYFAHDLHAQLLTQSGDGH 222
>gi|119383479|ref|YP_914535.1| MotA/TolQ/ExbB proton channel [Paracoccus denitrificans PD1222]
gi|119373246|gb|ABL68839.1| outer membrane transport energization protein ExbB [Paracoccus
denitrificans PD1222]
Length = 431
Score = 66.2 bits (160), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 108/231 (46%), Gaps = 17/231 (7%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFI--TLRRQ--FREFEQLFWS 65
D+S + +F+ VK ++ L S+++W+V++ K + + T R Q R E
Sbjct: 204 DLSPWGMFLAADWVVKAVMIGLAFASVVTWTVLVAKVLELLGATNRAQSGIRRIEHA--- 260
Query: 66 GQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSC---DKGARSPIGIQDRIDRMMDVAIA 122
+ + ++ + +A +E+ +S D+ S GI++R+D +D A
Sbjct: 261 --ASLPAALASAGSRRDPVSRMIRAAAAEYDRSAPALDQAGDS--GIKERVDSHLDRIEA 316
Query: 123 RELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLIS 181
++ L ++ S VG+ G V G+M F I+ + N+ V PGI E+L++
Sbjct: 317 IAGRRMSRGTGVLATIGSTAPFVGLFGTVWGIMNSFIGISQAQTTNLAVVAPGIAEALLA 376
Query: 182 ILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE--GNIS 230
+GL +IP+ + YN F + +++ A ++SR + G++S
Sbjct: 377 TAIGLVAAIPAVVIYNVFARAITGYRLRLANAAAGVKRLVSRDLDFRGSVS 427
>gi|152981708|ref|YP_001351935.1| biopolymer transport protein ExbB [Janthinobacterium sp. Marseille]
gi|151281785|gb|ABR90195.1| biopolymer transport protein ExbB [Janthinobacterium sp. Marseille]
Length = 279
Score = 66.2 bits (160), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 104/222 (46%), Gaps = 14/222 (6%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YG++ AL+ K + +L +FSI SW +I+ K + L +Q R+ E+
Sbjct: 61 NPYGIS-------ALWNGSDFVAKGTLLILLLFSIGSWYIIVAKLLAQRKLHKQARDTER 113
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
FW ++ +L++ G F+ ++ G + + + + + ++
Sbjct: 114 TFWDAGTVRQGLDTLES----GTPFHFIGTLALKATEHHSGLLAHVDFNTWVVQSLHSSV 169
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESL 179
+ + L+FL ++ S VG+ G V G+ +I +G S + V+ P + E+L
Sbjct: 170 DTVKNRLQDGLAFLATVGSTAPFVGLFGTVWGIYHALTAIGLSGQASIDKVAGP-VGEAL 228
Query: 180 ISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
I +GL V++P+ + YN + +K +++ F++ A+L
Sbjct: 229 IMTAIGLAVAVPAVLGYNLLVRRNKAALEKVQDFSSTLHAVL 270
>gi|308270223|emb|CBX26835.1| hypothetical protein N47_A08640 [uncultured Desulfobacterium sp.]
Length = 212
Score = 66.2 bits (160), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 98/192 (51%), Gaps = 16/192 (8%)
Query: 27 IITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAA 86
I+ LL + SILS ++II+KS+ + R RE ++L+ E V K +++ + +
Sbjct: 18 ILMLLIVLSILSIALIIEKSILYT---RWLRETKRLW------EEVKKYFESNSSSEMEN 68
Query: 87 IFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL---EEITEKLSFLGSMSSAGL 143
I + + R+ +G + MM+ A ++ EI +L+FLG++ +
Sbjct: 69 ILQQS----NTPITRIIRAGLGSLTEKESMMEAIEAEKIITRMEIERRLAFLGTLGTNAP 124
Query: 144 LVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDS 203
+G+ G VLG++ F+ +A I GI E+LI+ +GL V+IPS++ YN F + S
Sbjct: 125 FIGLFGTVLGIIHTFKDLAISGQGGTSVISGISEALIATGVGLWVAIPSAVFYNIFKKKS 184
Query: 204 KKFAMQMEGFAN 215
+ + A+
Sbjct: 185 SDMMVYADSIAH 196
>gi|85715429|ref|ZP_01046411.1| MotA/TolQ/ExbB proton channel [Nitrobacter sp. Nb-311A]
gi|85697850|gb|EAQ35725.1| MotA/TolQ/ExbB proton channel [Nitrobacter sp. Nb-311A]
Length = 335
Score = 66.2 bits (160), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 94/198 (47%), Gaps = 4/198 (2%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
++S +++F+ + VK ++ L S+++W++ I K V RR + +SL
Sbjct: 108 ELSPWSMFLSADIIVKLVMIGLAFASLVTWTICIAKMVELSLARRNLGTALREISESRSL 167
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+L + LA++ SAM E + S G S GI++R + E +
Sbjct: 168 AEAQMALGARDGV-LASLLASAMHEARLSA--GISSDAGIKERAASSFAEIVRAESRRVR 224
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCV 188
+ L ++ + VG+ G V G+M F I+ + N+ V PGI E+L++ LGL
Sbjct: 225 LGMGLLATIGATSPFVGLFGTVWGIMNSFIGISKAQTTNLAVVAPGIAEALLATALGLVA 284
Query: 189 SIPSSIAYNKFIEDSKKF 206
+I + I YN F +K +
Sbjct: 285 AILAVIIYNHFARVTKGY 302
>gi|301058352|ref|ZP_07199385.1| protein TolQ [delta proteobacterium NaphS2]
gi|300447588|gb|EFK11320.1| protein TolQ [delta proteobacterium NaphS2]
Length = 267
Score = 66.2 bits (160), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 108/233 (46%), Gaps = 20/233 (8%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLET 71
I + G VK ++ +LF FSI +W++I K R + +F +LF+ + ++
Sbjct: 23 DIIQMIFHAGPMVKFVMLILFFFSITTWAIIFLKFRMLRKARDETDDFLELFYESRDIKK 82
Query: 72 VCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIG-------------------IQDR 112
+ +S +A +F + +E+ + P G + D
Sbjct: 83 IYRSSDALKLSPVAQLFRAGYAEFTRFRKMQGSDPDGTSQGGTASQSEYPLRSQQTLMDN 142
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VS 171
++R + A + + + + LSFL + + +G+ G V G+M F SI S N+ V
Sbjct: 143 LERALRKAEIDQNKRLEKALSFLATTGNTAPFIGLFGTVWGIMESFHSIGLKGSANLAVV 202
Query: 172 IPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
PGI E+L++ GL +IP+ +A+N F + +M+ FA +F +++ RQ
Sbjct: 203 APGISEALVATAAGLAAAIPAVVAFNYFTQRVVSLRAEMDIFATDFLSMVVRQ 255
>gi|122042274|gb|ABM65817.1| ExbB [Mesorhizobium sp. R88B]
Length = 334
Score = 66.2 bits (160), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 98/197 (49%), Gaps = 13/197 (6%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S + +FM + VK ++ L S+++W++ + KS+ + + R + +L
Sbjct: 104 DLSPWGMFMAADIIVKAVMIGLAFASLVTWTIWLAKSLEIFGGKLRIRRAVRAIGDAATL 163
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPI---GIQDRIDRMM---DVAIAR 123
+ ++L G A+ + A + + + GA + G+++R+ + + A +R
Sbjct: 164 KQASRALDRSGGPG--ALLVKAAQD-ETALSAGALDHVSGDGLKERVSSRLSRIEAAASR 220
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISI 182
+ T L+ +GS + VG+ G V G+M F I+ + N+ V PGI E+L++
Sbjct: 221 RMSRGTGVLATIGSTAP---FVGLFGTVWGIMNAFIGISQAQTTNLAVVAPGIAEALLAT 277
Query: 183 LLGLCVSIPSSIAYNKF 199
+GL +IP+ + YN F
Sbjct: 278 AMGLVAAIPAVVIYNVF 294
>gi|53803730|ref|YP_114656.1| MotA/TolQ/ExbB proton channel family protein [Methylococcus
capsulatus str. Bath]
gi|53757491|gb|AAU91782.1| MotA/TolQ/ExbB proton channel family domain protein [Methylococcus
capsulatus str. Bath]
Length = 607
Score = 66.2 bits (160), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 86/176 (48%), Gaps = 4/176 (2%)
Query: 52 LRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQ- 110
L R+ E E+ + L + + + L I+ + + E KK A+ P+ +
Sbjct: 423 LDREETEDEKELADSEFLSALVGKHDHFQSSPLYHIYHAGIREVKKRTGSSAK-PLTPEA 481
Query: 111 -DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
+ + +D + RE + + K+ L + G +G+LG V+G+M F IA N+
Sbjct: 482 LNVVRVKLDSIVVRESQRLNSKMVLLTIAIAGGPFLGLLGTVVGVMITFAVIAATGDVNI 541
Query: 170 VSI-PGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
SI PGI +L++ + GL V+IPS AYN + K M F++EF A+LS +
Sbjct: 542 NSIAPGIAAALLATVAGLAVAIPSLFAYNYLLTQIKDVIADMRVFSDEFLAMLSER 597
>gi|322831377|ref|YP_004211404.1| tonB-system energizer ExbB [Rahnella sp. Y9602]
gi|321166578|gb|ADW72277.1| tonB-system energizer ExbB [Rahnella sp. Y9602]
Length = 313
Score = 66.2 bits (160), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 111/232 (47%), Gaps = 21/232 (9%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVN-FITLRRQFREFEQLFWSGQS 68
D+S+ ++ + VK ++ L + S+++W+++ K F RR REF+ L S
Sbjct: 78 DLSVMGMYHHADVVVKTVMIGLLLASVVTWALLFSKGAEVFTGKRRMRREFDAL----SS 133
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCD--KGARSPIGIQDR----IDRMMDVAIA 122
+ T+ ++ + + ++I + + + + G+ GI++R ++R + A
Sbjct: 134 VRTLDEAAEQAESFAASSISAQMIRDAQNELELSAGSTDNNGIKERTGFRLERRVSAA-G 192
Query: 123 RELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLIS 181
R + L+ +G++S VG+ G V G+M F IA + N+ V PGI E+L++
Sbjct: 193 RYMGRGNGILATIGAISP---FVGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGIAEALLA 249
Query: 182 ILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ-----TEGN 228
+GL +IP+ + YN F + Q+ A + + R +EGN
Sbjct: 250 TAVGLVAAIPAVVIYNIFARTITSYRHQVGDVAAQIILLQGRDLDLAASEGN 301
>gi|91978465|ref|YP_571124.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris BisB5]
gi|91684921|gb|ABE41223.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris BisB5]
Length = 267
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 103/201 (51%), Gaps = 12/201 (5%)
Query: 5 GLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFW 64
GL D+S + +F + VK ++T L + S+ +W+V + K++ + R+
Sbjct: 39 GLLPRDLSPWGMFKNADIVVKIVMTGLAVASLATWTVWLSKTIELRHETARARDGLAKLE 98
Query: 65 SGQSLETVCKSLKNHHNIGL---AAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
+ +L + + + H + A +++S W + D + +G+ R++R+ + A+
Sbjct: 99 ADTTLAELRSADEAHDAVAQLVQTAAREASLSGW--TFDDDFKDRVGL--RLERV-EAAM 153
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLI 180
+R + T L+ +G+++ VG+ G V G+M F I+ ++ N+ V PGI E+L+
Sbjct: 154 SRRIARGTGILATIGAVAP---FVGLFGTVWGIMNAFIGISEAHTTNLAVVAPGIAEALL 210
Query: 181 SILLGLCVSIPSSIAYNKFIE 201
+ LGL ++P+ + YN +
Sbjct: 211 ATALGLVAAVPAVVIYNYLVR 231
>gi|251791319|ref|YP_003006040.1| tonB-system energizer ExbB [Dickeya zeae Ech1591]
gi|247539940|gb|ACT08561.1| tonB-system energizer ExbB [Dickeya zeae Ech1591]
Length = 296
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/227 (20%), Positives = 107/227 (47%), Gaps = 7/227 (3%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S++ ++ + VK ++ L + S+++W++ KS + ++ +++ R Q ++L
Sbjct: 61 DLSVWGMYQHADVVVKTVMIGLLLASVVTWAIFFGKSASLMSAKKRIRREYQALEEARTL 120
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+ + G ++ + + ++ + + GI++R + +A ++
Sbjct: 121 DD-ATDIAAEFKPGSVSLQLLTDARNEQVLSERSDDNNGIKERTAFRFERRVAATGRQMG 179
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCV 188
+L ++ + +G+ G V G+M F IA + N+ V PGI E+L++ +GL
Sbjct: 180 RGTGYLATVGAIAPFIGLFGTVWGIMNSFIGIAQSQTTNLAVVAPGIAEALLATAIGLVA 239
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE-----GNIS 230
+IP+ + YN F + + + A + + SR + GN+S
Sbjct: 240 AIPAVVIYNVFARWTASYKAIVGDVAAQVLLLQSRDLDIAASVGNVS 286
>gi|194333581|ref|YP_002015441.1| protein TolQ [Prosthecochloris aestuarii DSM 271]
gi|194311399|gb|ACF45794.1| protein TolQ [Prosthecochloris aestuarii DSM 271]
Length = 220
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 105/206 (50%), Gaps = 3/206 (1%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
IF+L GL V ++ +L +FS+LSW++II K + R+F F+ SL+ V
Sbjct: 8 IFSLVTDSGLVVLFVLAVLLLFSVLSWTIIIFKYGLIRKAMSESRDFLDYFFEVSSLDKV 67
Query: 73 CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKL 132
+ + N LA +F + E++ D+ + ++RI R + E ++ +
Sbjct: 68 FGESERYRNGALARVFRAGYIEYRALSDR--QDTRFCEERIARAIKREANAESSRLSRYV 125
Query: 133 SFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCVSIP 191
+FL ++ + +G+ G V G+M FQSI S ++ ++ PGI E+LI+ GL +IP
Sbjct: 126 AFLATVGNTAPFIGLFGTVWGIMNSFQSIGLTQSASLATVAPGIAEALIATAAGLAAAIP 185
Query: 192 SSIAYNKFIEDSKKFAMQMEGFANEF 217
S I +N F + ++ F+ E+
Sbjct: 186 SVIGFNYFSQQIALVERDLDDFSAEY 211
>gi|134095826|ref|YP_001100901.1| biopolymer transport ExbB protein [Herminiimonas arsenicoxydans]
gi|133739729|emb|CAL62780.1| Putative biopolymer transport ExbB protein [Herminiimonas
arsenicoxydans]
Length = 230
Score = 65.9 bits (159), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 98/216 (45%), Gaps = 9/216 (4%)
Query: 17 FMQMGLAV-KCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKS 75
+ G AV + L I SILSW I+ K + +RR E FW +L +
Sbjct: 15 YWAQGDAVSHAVAYALLIMSILSWYYILSKGWSAWRIRRSAAALEN-FWQAPTLPDAIAA 73
Query: 76 LK--NHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEK 131
++ + N+ LAA + A + + A + G + I R + I R +
Sbjct: 74 IRLTDSENVYTPLAAQSVEAANITPHANSLNANTDPG--ELITRTLRQEINRVSSRLENG 131
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCVSI 190
L+ L S+ S +G+ G V G+ +++ + + + G + E+LI LGL V+I
Sbjct: 132 LTLLASVGSTAPFIGLFGTVWGIYHALVAVSASGTVQIDKVAGPVGEALIMTALGLAVAI 191
Query: 191 PSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
P+ +AYN F ++ +++ FA++ A L+ T
Sbjct: 192 PAVLAYNAFTRVNRITLAELDAFAHDLHAYLTTGTR 227
>gi|254255297|ref|ZP_04948613.1| Biopolymer transport protein [Burkholderia dolosa AUO158]
gi|124901034|gb|EAY71784.1| Biopolymer transport protein [Burkholderia dolosa AUO158]
Length = 299
Score = 65.9 bits (159), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 99/228 (43%), Gaps = 25/228 (10%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YGL AL+ + ++ LL + S+ SW +++ K V R+ R +
Sbjct: 70 NPYGLG-------ALWKNGDFVARFVLLLLVVMSMGSWYIMVTKFVEQYRANRRARHADD 122
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDR--MMDV 119
W+ SL K L A + + + G + + +DR +DV
Sbjct: 123 NLWAAPSLADGVKQLDEASPFRFIA---------QTAIEAGEHHDEALLEAVDRNTWIDV 173
Query: 120 AIARELEEITEK----LSFLGSMSSAGLLVGILGAVLGMMGFFQS--IAGYYSNNVVSIP 173
+I R ++ + L+FL ++ S VG+ G V G+ + IAG S + V+ P
Sbjct: 174 SIERATTSVSNRLQDGLAFLATVGSTSPFVGLFGTVWGIYHALTAIGIAGQASIDKVAGP 233
Query: 174 GIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+ E+LI +GL V++P+ + YN + +K ++ F + +L
Sbjct: 234 -VGEALIMTAIGLAVAVPAVLGYNFLVRRNKSVMERVRAFGAQLHTVL 280
>gi|107029103|ref|YP_626198.1| MotA/TolQ/ExbB proton channel [Burkholderia cenocepacia AU 1054]
gi|116689738|ref|YP_835361.1| MotA/TolQ/ExbB proton channel [Burkholderia cenocepacia HI2424]
gi|105898267|gb|ABF81225.1| outer membrane transport energization protein ExbB [Burkholderia
cenocepacia AU 1054]
gi|116647827|gb|ABK08468.1| outer membrane transport energization protein ExbB [Burkholderia
cenocepacia HI2424]
Length = 303
Score = 65.9 bits (159), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 101/228 (44%), Gaps = 25/228 (10%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YGL AL+ + ++ LL I S+ SW ++I K V + R+ + +
Sbjct: 74 NPYGLG-------ALWKNGDFVARFVLILLVIMSMGSWYIMISKFVEQLRANRRAKLADA 126
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDR--MMDV 119
WS SL K L A + + + G + + +DR +DV
Sbjct: 127 QLWSAPSLAEGAKLLDEASPFRFIA---------ETAIEAGEHHDEALLEAVDRNTWIDV 177
Query: 120 AIARELEEITEK----LSFLGSMSSAGLLVGILGAVLGMMGFFQS--IAGYYSNNVVSIP 173
++ R + ++ + L+FL ++ S VG+ G V G+ + IAG S + V+ P
Sbjct: 178 SVERSITNVSNRMQDGLAFLATVGSTAPFVGLFGTVWGIYHALTAIGIAGQASIDKVAGP 237
Query: 174 GIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+ E+LI +GL V++P+ + YN + +K ++ F + +L
Sbjct: 238 -VGEALIMTAIGLAVAVPAVLGYNFLVRRNKSVMERVRNFGAQLHTVL 284
>gi|254524713|ref|ZP_05136768.1| transport protein ExbB2 [Stenotrophomonas sp. SKA14]
gi|219722304|gb|EED40829.1| transport protein ExbB2 [Stenotrophomonas sp. SKA14]
Length = 594
Score = 65.9 bits (159), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 100/215 (46%), Gaps = 14/215 (6%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFW--SGQSLETVC------KSLK 77
++ +L + +LSW+++I KS +F + F + F SG L T+ K+
Sbjct: 373 VVVAILGLMMLLSWAIMIAKSRHFGRTSKANAVFTESFGKLSGVPLRTLSDMDRQGKAPT 432
Query: 78 NHHNIGLAAIFMSAMSEWKKSCDKGARS---PIGIQDRIDRMMDVAIARELEEITEKLSF 134
H+ L I+ A+ E ++ + S I MD + RE E + ++++
Sbjct: 433 AMHDGSLWRIYQVAIDEMQQRHQRDGNSGYLSAATIAAIRASMDAVMVREQEGMARRMNW 492
Query: 135 LGSMSSAGLLVGILGAVLGMMGFF--QSIAGYYSNNVVSIPGIIESLISILLGLCVSIPS 192
L + VG+ G V+G+M F ++AG N V+ PG+ +L+ GL V+IP+
Sbjct: 493 LSTTIEGAPYVGLFGTVIGIMLVFVVAAMAGAVDINSVA-PGMAAALLCTAAGLGVAIPA 551
Query: 193 SIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEG 227
YN ++ M F +EF+A L+ + +G
Sbjct: 552 LFGYNYLGARAEAIGADMAVFIDEFAARLAEEQDG 586
>gi|148253728|ref|YP_001238313.1| biopolymer transport [Bradyrhizobium sp. BTAi1]
gi|146405901|gb|ABQ34407.1| outer membrane transport energization protein ExbB [Bradyrhizobium
sp. BTAi1]
Length = 258
Score = 65.9 bits (159), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 94/201 (46%), Gaps = 13/201 (6%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+S + +F+Q + VK ++ L + S+ +W+V++ K++ R R + SL
Sbjct: 17 LSPWTMFLQADMVVKAVMIGLALASVATWTVLVVKTIQLRAALRVARVALGTAVTAHSLA 76
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRI----DRMMDVAIARELE 126
S + + + A E KS A GI++R+ +R+ A+AR
Sbjct: 77 NAAGSESAQEGV-VGRLLAVAEDEIDKSRGLPAD---GIKERVAWQFERVEAAAVAR--- 129
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLG 185
I + L ++ + VG+ G V G+M F I+ ++ N+ V PGI E+L++ G
Sbjct: 130 -IGRGIGILATVGAVAPFVGLFGTVWGIMNSFIGISHAHTTNLAVVAPGIAEALLATAFG 188
Query: 186 LCVSIPSSIAYNKFIEDSKKF 206
L +IP+ + YN F + +
Sbjct: 189 LAAAIPAVVIYNLFARATGGY 209
>gi|206560151|ref|YP_002230915.1| putative iron-transport protein [Burkholderia cenocepacia J2315]
gi|198036192|emb|CAR52088.1| putative iron-transport protein [Burkholderia cenocepacia J2315]
Length = 287
Score = 65.9 bits (159), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 101/228 (44%), Gaps = 25/228 (10%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YGL AL+ + ++ LL I S+ SW ++I K V + R+ + +
Sbjct: 58 NPYGLG-------ALWKNGDFVARFVLILLVIMSMGSWYIMITKFVEQLRANRRAKLADA 110
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDR--MMDV 119
WS SL K L A + + + G + + +DR +DV
Sbjct: 111 QLWSAPSLAEGAKLLDEASPFRFIA---------ETAIEAGEHHDEALLEAVDRNTWIDV 161
Query: 120 AIARELEEITEK----LSFLGSMSSAGLLVGILGAVLGMMGFFQS--IAGYYSNNVVSIP 173
++ R + ++ + L+FL ++ S VG+ G V G+ + IAG S + V+ P
Sbjct: 162 SVERSITNVSNRMQDGLAFLATVGSTAPFVGLFGTVWGIYHALTAIGIAGQASIDKVAGP 221
Query: 174 GIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+ E+LI +GL V++P+ + YN + +K ++ F + +L
Sbjct: 222 -VGEALIMTAIGLAVAVPAVLGYNFLVRRNKSVMERVRNFGAQLHTVL 268
>gi|330975325|gb|EGH75391.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. aptata str.
DSM 50252]
Length = 151
Score = 65.9 bits (159), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 71/142 (50%), Gaps = 2/142 (1%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLET 71
S+++L + V+ ++ +L S+ SW VI Q+S RR FE+ FWSG L
Sbjct: 10 SMWSLVSNASIVVQLVMLILVAASVTSWIVIFQRSNMLRAGRRALDSFEERFWSGIDLSK 69
Query: 72 VCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+ + ++ + G+ IF + E+ + + P + + + R M VAI+RE +++
Sbjct: 70 LYRQAGSNPDPDSGVEQIFRAGFKEFSRLRQQSGVDPDAVMEGVARAMRVAISREEKKLE 129
Query: 130 EKLSFLGSMSSAGLLVGILGAV 151
L +L ++ S VG+ G V
Sbjct: 130 AGLPYLATVGSTSPYVGLFGTV 151
>gi|78189862|ref|YP_380200.1| ExbB/TolQ family protein [Chlorobium chlorochromatii CaD3]
gi|78172061|gb|ABB29157.1| Cell division and transport-associated protein TolQ [Chlorobium
chlorochromatii CaD3]
Length = 220
Score = 65.9 bits (159), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 98/206 (47%), Gaps = 3/206 (1%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
IFAL G V ++ L FS++SW++I K++ R + + F F+ + E +
Sbjct: 9 IFALVADAGAVVLVVLFTLLAFSVVSWAIIAYKAIGLRAARYESKLFMDAFFD-VAPERL 67
Query: 73 CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKL 132
+ LA ++ + + ++ D + Q + R + A E +++ +
Sbjct: 68 FAESERLSGAPLARVYRAGYIAF-RALDGKNVTFKQAQAVVARAIKRATNAETKQLASLV 126
Query: 133 SFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCVSIP 191
FL ++ + +G+ G V G+M FQ+I S ++ ++ PGI E+L++ +GL +IP
Sbjct: 127 PFLATVGNTAPFIGLFGTVWGIMTSFQAIGVTRSASLSAVAPGISEALVATAVGLAAAIP 186
Query: 192 SSIAYNKFIEDSKKFAMQMEGFANEF 217
+ + YN + +E FA EF
Sbjct: 187 AVMGYNYLTQQVGLLERDIEEFAPEF 212
>gi|254245397|ref|ZP_04938718.1| Biopolymer transport protein [Burkholderia cenocepacia PC184]
gi|124870173|gb|EAY61889.1| Biopolymer transport protein [Burkholderia cenocepacia PC184]
Length = 301
Score = 65.9 bits (159), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 101/228 (44%), Gaps = 25/228 (10%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YGL AL+ + ++ LL I S+ SW ++I K V + R+ + +
Sbjct: 72 NPYGLG-------ALWKNGDFVARFVLILLVIMSMGSWYIMISKFVEQLRANRRAKLADA 124
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDR--MMDV 119
WS SL K L A + + + G + + +DR +DV
Sbjct: 125 QLWSAPSLAEGAKLLDEASPFRFIA---------ETAIEAGEHHDEALLEAVDRNTWIDV 175
Query: 120 AIARELEEITEK----LSFLGSMSSAGLLVGILGAVLGMMGFFQS--IAGYYSNNVVSIP 173
++ R + ++ + L+FL ++ S VG+ G V G+ + IAG S + V+ P
Sbjct: 176 SVERSITNVSNRMQDGLAFLATVGSTAPFVGLFGTVWGIYHALTAIGIAGQASIDKVAGP 235
Query: 174 GIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+ E+LI +GL V++P+ + YN + +K ++ F + +L
Sbjct: 236 -VGEALIMTAIGLAVAVPAVLGYNFLVRRNKSVMERVRNFGAQLHTVL 282
>gi|89901943|ref|YP_524414.1| MotA/TolQ/ExbB proton channel [Rhodoferax ferrireducens T118]
gi|89346680|gb|ABD70883.1| MotA/TolQ/ExbB proton channel [Rhodoferax ferrireducens T118]
Length = 301
Score = 65.9 bits (159), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 102/222 (45%), Gaps = 14/222 (6%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YG AL+ + ++ LL I S+ SW ++I K + + RQ + +
Sbjct: 85 NPYGFE-------ALWKTSDAVARTVLLLLLIMSVGSWYIMIVKVLEQAKMGRQAKAAAR 137
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
FWS +++ +L+ + FM+ + +G I + D I + A+
Sbjct: 138 DFWSADTVQQGAAALEANSPFR----FMAEAATTAVKKHEGLMGHIPLNDWIAMRIQRAV 193
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESL 179
R L+FL ++ S VG+ G V G+ +I +G S + V+ P + E+L
Sbjct: 194 DRIQSNTQGGLAFLATVGSISPFVGLFGTVWGIYHALTAIGISGQASIDKVAGP-VGEAL 252
Query: 180 ISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+ +GL V++P+ +AYN + +K ++ F+++ A++
Sbjct: 253 LMTAIGLAVAVPAVLAYNWLVRRNKAVMDEVRAFSSDLHAVV 294
>gi|91776754|ref|YP_546510.1| MotA/TolQ/ExbB proton channel [Methylobacillus flagellatus KT]
gi|91710741|gb|ABE50669.1| outer membrane transport energization protein ExbB [Methylobacillus
flagellatus KT]
Length = 555
Score = 65.9 bits (159), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 98/206 (47%), Gaps = 4/206 (1%)
Query: 16 LFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV-CK 74
LF + + +I +L I ++S +V++ K+ + +EF Q F + + +
Sbjct: 340 LFESLTVDAWVVIIILAIMFVISAAVMVAKARQVARNDKANQEFLQRFNQANNAQLLQLD 399
Query: 75 SLKNHHNIGLAAIFMSAMSEWKKS-CDKGARSPIGIQ-DRIDRMMDVAIARELEEITEKL 132
N + LA ++M+ + E +K G+ S G D I +D + RE +++ +
Sbjct: 400 QGNNKTDSTLARLYMAGLREIRKRYAADGSVSLSGASLDAIKAAIDADLIRENKKLNANI 459
Query: 133 SFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCVSIP 191
L S G +G+LG V+G+M F IA NV +I PGI +L++ + GL V+IP
Sbjct: 460 VLLTIAISGGPFLGLLGTVVGVMITFAEIAAAGDVNVNAIAPGIAAALMATVAGLAVAIP 519
Query: 192 SSIAYNKFIEDSKKFAMQMEGFANEF 217
+ YN K M+ F +E+
Sbjct: 520 ALFGYNYLSSRIKNINTDMQIFVDEY 545
>gi|91782826|ref|YP_558032.1| biopolymer transport transmembrane protein, ExbB/TolQ [Burkholderia
xenovorans LB400]
gi|91686780|gb|ABE29980.1| outer membrane transport energization protein ExbB [Burkholderia
xenovorans LB400]
Length = 301
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 101/228 (44%), Gaps = 25/228 (10%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YGL AL+ + ++ LL + S+ SW ++I K V R+ + ++
Sbjct: 72 NPYGLG-------ALWKNGDFVARFVLILLVLMSMGSWYIMITKFVEQFRANRRAKSADE 124
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDR--MMDV 119
W+ SL K L A + + + G + + +DR +D
Sbjct: 125 QLWTAPSLVEGAKLLDEASPFRFIA---------ETAIEAGEHHDEALLEAVDRNTWIDT 175
Query: 120 AIARELEEITEK----LSFLGSMSSAGLLVGILGAVLGMMGFFQS--IAGYYSNNVVSIP 173
++ R + ++ + L+FLG++ S VG+ G V G+ + IAG S + V+ P
Sbjct: 176 SVERAITNVSNRLQDGLAFLGTVGSTAPFVGLFGTVWGIYHALTAIGIAGQASIDKVAGP 235
Query: 174 GIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+ E+LI +GL V++P+ + YN + +K ++ F + +L
Sbjct: 236 -VGEALIMTAIGLAVAVPAVLGYNFLVRRNKSVMERVRAFGAQLHTVL 282
>gi|170733074|ref|YP_001765021.1| MotA/TolQ/ExbB proton channel [Burkholderia cenocepacia MC0-3]
gi|169816316|gb|ACA90899.1| MotA/TolQ/ExbB proton channel [Burkholderia cenocepacia MC0-3]
Length = 301
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 101/228 (44%), Gaps = 25/228 (10%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YGL AL+ + ++ LL I S+ SW ++I K V + R+ + +
Sbjct: 72 NPYGLG-------ALWKNGDFVARFVLILLVIMSMGSWYIMITKFVEQLRANRRAKLADA 124
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDR--MMDV 119
WS SL K L A + + + G + + +DR +DV
Sbjct: 125 QLWSAPSLAEGAKLLDEASPFRFIA---------ETAIEAGEHHDEALLEAVDRNTWIDV 175
Query: 120 AIARELEEITEK----LSFLGSMSSAGLLVGILGAVLGMMGFFQS--IAGYYSNNVVSIP 173
++ R + ++ + L+FL ++ S VG+ G V G+ + IAG S + V+ P
Sbjct: 176 SVERSITNVSNRMQDGLAFLATVGSTAPFVGLFGTVWGIYHALTAIGIAGQASIDKVAGP 235
Query: 174 GIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+ E+LI +GL V++P+ + YN + +K ++ F + +L
Sbjct: 236 -VGEALIMTAIGLAVAVPAVLGYNFLVRRNKSVMERVRNFGAQLHTVL 282
>gi|134293632|ref|YP_001117368.1| MotA/TolQ/ExbB proton channel [Burkholderia vietnamiensis G4]
gi|134136789|gb|ABO57903.1| outer membrane transport energization protein ExbB [Burkholderia
vietnamiensis G4]
Length = 301
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 101/228 (44%), Gaps = 25/228 (10%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YGL AL+ + ++ LL I S+ SW +++ K V + R+ + +
Sbjct: 72 NPYGLG-------ALWKNGDFVARFVLILLVIMSMGSWYIMVTKFVEQLRANRRAKLADA 124
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDR--MMDV 119
WS SL K L A + + + G + + +DR +DV
Sbjct: 125 QLWSAPSLAEGAKLLDEASPFRFIA---------ETAIEAGEHHEEALLEAVDRNTWIDV 175
Query: 120 AIARELEEITEK----LSFLGSMSSAGLLVGILGAVLGMMGFFQS--IAGYYSNNVVSIP 173
++ R + ++ + L+FL ++ S VG+ G V G+ + IAG S + V+ P
Sbjct: 176 SVERSITNVSNRMQDGLAFLATVGSTAPFVGLFGTVWGIYHALTAIGIAGQASIDKVAGP 235
Query: 174 GIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+ E+LI +GL V++P+ + YN + +K ++ F + +L
Sbjct: 236 -VGEALIMTAIGLAVAVPAVLGYNFLVRRNKSVMERVRNFGAQLHTVL 282
>gi|257095500|ref|YP_003169141.1| MotA/TolQ/ExbB proton channel [Candidatus Accumulibacter phosphatis
clade IIA str. UW-1]
gi|257048024|gb|ACV37212.1| MotA/TolQ/ExbB proton channel [Candidatus Accumulibacter phosphatis
clade IIA str. UW-1]
Length = 239
Score = 65.5 bits (158), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 105/219 (47%), Gaps = 17/219 (7%)
Query: 14 FALFMQMGLAV-KCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
FA F+ V + ++ L + SI SW +I+ +++ +R+ EF + FW SL V
Sbjct: 11 FAHFLTETDGVGRSVLAALLLLSIASWYLIVTRALANAIAQRRAEEFLRRFWQASSLSEV 70
Query: 73 CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPI-------GIQDRIDRMMDVAIAREL 125
+L G A + + +KS D A S G+ + + R ++ + RE
Sbjct: 71 ETTL------GAHAADNAFAALARKSLDALADSSRESLAVAGGMAEYLTRTLNNEVDREA 124
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISIL 183
+ L+ L S SA +G+ G V G+ I +G + + V+ P E+LI
Sbjct: 125 AKAEYGLTVLASAGSAAPYIGLFGTVWGIYHALVQIGLSGQGTLDKVAGPEG-EALIMTA 183
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
LGL V+IP+ +AYN F ++ + ++E FA++ +L+
Sbjct: 184 LGLAVAIPAVLAYNAFNRRNRVWLARLESFAHDLYVLLT 222
>gi|254250436|ref|ZP_04943755.1| Biopolymer transport protein [Burkholderia cenocepacia PC184]
gi|124879570|gb|EAY66926.1| Biopolymer transport protein [Burkholderia cenocepacia PC184]
Length = 312
Score = 65.5 bits (158), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 105/240 (43%), Gaps = 28/240 (11%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YGL AL+ + ++ LL + S+ SW ++I K V + + ++
Sbjct: 76 NPYGLG-------ALWANGDFVARFVLGLLVVMSLGSWYIMITKFVEQARANGRAKSADE 128
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDR--MMDV 119
W+ +L L + A + + + G + D +DR +D+
Sbjct: 129 QVWNAPTLAEGAAQLDDASPFRFIA---------ENAIEAGEHHDTALLDSVDRNTWIDL 179
Query: 120 AIARELEEITEKL----SFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIP 173
I R + ++ +L +FLG++ S VG+ G V G+ +I AG S + V+ P
Sbjct: 180 NIERSITSVSNRLQDGLAFLGTVGSTAPFVGLFGTVWGIYHALTAIGIAGQASIDKVAGP 239
Query: 174 GIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL---SRQTEGNIS 230
+ E+LI +GL V++P+ + YN + +K ++ F + +L R+ G I+
Sbjct: 240 -VGEALIMTAIGLAVAVPAVLGYNFLVRRNKSVMERVRDFGAQLHTVLLAGGRRAAGGIA 298
>gi|121606676|ref|YP_984005.1| MotA/TolQ/ExbB proton channel [Polaromonas naphthalenivorans CJ2]
gi|120595645|gb|ABM39084.1| MotA/TolQ/ExbB proton channel [Polaromonas naphthalenivorans CJ2]
Length = 237
Score = 65.5 bits (158), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 97/230 (42%), Gaps = 24/230 (10%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+S+ AL Q GL + + LL S+ SW VI+ K+ FW S++
Sbjct: 1 MSLLALLTQGGLVSQLVAGLLLSMSVASWVVILWKTWLLHRAVGDVARSTAAFWQSASVD 60
Query: 71 TVCKSLKNHHNIGL-----AAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
C+ + L AA A + DK A+ + R++ A L
Sbjct: 61 AACEKVAAFDRDALVLPLIAATQTRAHGTLATAGDKAAQ--------LTRVLRDA----L 108
Query: 126 EEITEKLSF----LGSMSSAGLLVGILGAVLGMMGFFQ--SIAGYYSNNVVSIPGIIESL 179
I +KL F L ++ S VG+LG V G+ + AG + + VS P + E+L
Sbjct: 109 HAILQKLQFGQILLATVGSTAPFVGLLGTVWGIYHALTGMATAGQVTIDKVSGP-VGEAL 167
Query: 180 ISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNI 229
I GL V+IP+ +AYN F + +EGFA + +L+ +
Sbjct: 168 IMTAAGLAVAIPAVLAYNVFGRSIGRIEADLEGFAFDLRELLAADANAKV 217
>gi|253997817|ref|YP_003049880.1| MotA/TolQ/ExbB proton channel [Methylovorus sp. SIP3-4]
gi|313199891|ref|YP_004038549.1| mota/tolq/exbb proton channel [Methylovorus sp. MP688]
gi|253984496|gb|ACT49353.1| MotA/TolQ/ExbB proton channel [Methylovorus sp. SIP3-4]
gi|312439207|gb|ADQ83313.1| MotA/TolQ/ExbB proton channel [Methylovorus sp. MP688]
Length = 236
Score = 65.5 bits (158), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 94/202 (46%), Gaps = 10/202 (4%)
Query: 22 LAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHN 81
L V ++ L FS+++W+++ K V Q + +++ FW+ L + + N N
Sbjct: 9 LIVDSVLWTLVAFSVVTWTLLAVKGVQNFRAGYQNKRYKKAFWAAPDLLSAAE--INDFN 66
Query: 82 IGLAAIFMSAMSEWKKSCDKGARSPIGI----QDRIDRMMDVAIARELEEITEKLSFLGS 137
G AA A + D + + QD ++R + I +E + L+ L S
Sbjct: 67 -GPAARVAQAGFNALRDADTPGQHDLEHSGERQDLLERSLRQQILKERRSLESGLAILAS 125
Query: 138 MSSAGLLVGILGAVLGMMGFFQSIA--GYYSNNVVSIPGIIESLISILLGLCVSIPSSIA 195
+ S VG+ G V G+M I G S VV+ P I E+L++ LG+ V++P+ +A
Sbjct: 126 IGSTSPFVGLFGTVWGIMHALTDIGRLGTASLEVVAGP-IGEALVATGLGIAVAVPAVLA 184
Query: 196 YNKFIEDSKKFAMQMEGFANEF 217
YN F K + ++ FA +
Sbjct: 185 YNFFTRRLKLASGDLDDFAADL 206
>gi|253686555|ref|YP_003015745.1| MotA/TolQ/ExbB proton channel [Pectobacterium carotovorum subsp.
carotovorum PC1]
gi|251753133|gb|ACT11209.1| MotA/TolQ/ExbB proton channel [Pectobacterium carotovorum subsp.
carotovorum PC1]
Length = 238
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 101/202 (50%), Gaps = 13/202 (6%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS----GQSLETVCKSLKNHHN 81
+I LL +FS+++W + + K V + +R+ R F FW Q+ ET K + N
Sbjct: 14 AVILLLLLFSLVTWGLGLLKFVQYGRAQRRDRRFRAAFWQQDDVSQTPETSAKQPGSLAN 73
Query: 82 IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSA 141
+ LAA+ + + + I + DR++R + I RE + L+ L S+ S
Sbjct: 74 LALAAVKAPEQMSGQLALN------IHLPDRVERALQQQIQRERRTLESGLAVLASIGST 127
Query: 142 GLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKF 199
+G+ G V G+M Q I +G S + V+ P I +LI+ +G+ V++P+ + YN F
Sbjct: 128 SPFIGLFGTVWGIMAALQEIGLSGSASLDTVAGP-IGNALIATGIGIAVAVPAVLIYNYF 186
Query: 200 IEDSKKFAMQMEGFANEFSAIL 221
+ K M+ FA++ +++
Sbjct: 187 LRRLKLAVADMDDFAHDVYSVM 208
>gi|85713906|ref|ZP_01044895.1| MotA/TolQ/ExbB proton channel [Nitrobacter sp. Nb-311A]
gi|85716372|ref|ZP_01047344.1| MotA/TolQ/ExbB proton channel [Nitrobacter sp. Nb-311A]
gi|85696729|gb|EAQ34615.1| MotA/TolQ/ExbB proton channel [Nitrobacter sp. Nb-311A]
gi|85699032|gb|EAQ36900.1| MotA/TolQ/ExbB proton channel [Nitrobacter sp. Nb-311A]
Length = 232
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 99/216 (45%), Gaps = 10/216 (4%)
Query: 16 LFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQ----FREFEQLFWSGQSLET 71
+FMQ + VK ++ L S+++W++ + + V RR+ R+ E+ +
Sbjct: 1 MFMQADIIVKAVMIGLAFASLVTWTIWLARGVELAASRRRAQSCLRKLERAGTLAAARAE 60
Query: 72 VCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEK 131
+ + + + + +A +E ++S D S GI++R+ + A+ +I
Sbjct: 61 IAEGWTGKGPV--SDLMEAAENECRRSNDL---SSEGIKERLAIALSRIEAKAGRDIARG 115
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSI 190
L ++ + VG+ G V G+M F I+ + N+ V PGI E+L++ LGL +I
Sbjct: 116 TGLLATIGATAPFVGLFGTVWGIMNAFIGISHSKTTNLAVVAPGIAEALLATALGLVAAI 175
Query: 191 PSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
P+ I YN F + + + E +SR E
Sbjct: 176 PAVIIYNVFARALSSYRALLSDASGEIIQHISRDLE 211
>gi|316935513|ref|YP_004110495.1| tonB-system energizer ExbB [Rhodopseudomonas palustris DX-1]
gi|315603227|gb|ADU45762.1| tonB-system energizer ExbB [Rhodopseudomonas palustris DX-1]
Length = 266
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 99/198 (50%), Gaps = 15/198 (7%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S + +F + VK ++ L I S+ +W+V + K++ + R+ + +L
Sbjct: 44 DLSPWGMFRNADIVVKVVMAGLAIASLATWTVWLSKTIELRRETARARDGLAKLETDTTL 103
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSE-----WKKSCDKGARSPIGIQDRIDRMMDVAIARE 124
+ + + H+ ++ + +A E W D R + R++R+ + A+AR+
Sbjct: 104 AELGRDAEGAHD-AVSQLIQTAAREGSLSGWTFDADFKDRVAL----RLERV-EAAMARK 157
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISIL 183
+ T L+ +G+++ VG+ G V G+M F I+ ++ N+ V PGI E+L++
Sbjct: 158 IASGTGILATIGAVAP---FVGLFGTVWGIMNAFIGISEAHTTNLAVVAPGIAEALLATA 214
Query: 184 LGLCVSIPSSIAYNKFIE 201
LGL ++P+ + YN +
Sbjct: 215 LGLVAAVPAVVIYNYLVR 232
>gi|187923438|ref|YP_001895080.1| MotA/TolQ/ExbB proton channel [Burkholderia phytofirmans PsJN]
gi|187714632|gb|ACD15856.1| MotA/TolQ/ExbB proton channel [Burkholderia phytofirmans PsJN]
Length = 301
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 102/228 (44%), Gaps = 25/228 (10%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YGL+ AL+ + ++ LL + S+ SW ++I K V R+ + ++
Sbjct: 72 NPYGLS-------ALWNNGDFVARFVLILLVLMSMGSWYIMITKFVEQFRANRRAKSADE 124
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDR--MMDV 119
W+ SL K L A + + + G + + +DR +D
Sbjct: 125 QLWTAPSLVEGAKLLDETSPFRFIA---------ETAIEAGEHHDEALLEAVDRNTWIDT 175
Query: 120 AIARELEEITEKL----SFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIP 173
++ R + ++ +L +FLG++ S VG+ G V G+ +I AG S + V+ P
Sbjct: 176 SVERAITNVSNRLQDGLAFLGTVGSTAPFVGLFGTVWGIYHALTAIGIAGQASIDKVAGP 235
Query: 174 GIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+ E+LI +GL V++P+ + YN + +K ++ F + +L
Sbjct: 236 -VGEALIMTAIGLAVAVPAVLGYNFLVRRNKSVMERVRAFGAQLHTVL 282
>gi|332971556|gb|EGK10506.1| TonB family auxiliary protein ExbB [Kingella kingae ATCC 23330]
Length = 231
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 100/214 (46%), Gaps = 3/214 (1%)
Query: 16 LFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKS 75
+F Q + + L SI +W VI+ +S+ ++ R WS ++L+ +
Sbjct: 18 VFQQGDPVLIGVFLFLVAMSICTWVVIVLRSIRHFAAKKANRAALDAIWSSKTLDNAEHA 77
Query: 76 LKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLS 133
K + + LAA A + +S + + ++R + +I++ + ++
Sbjct: 78 AKQNPSPISDLAAHAFVANRRFSESQQTLLSASLPKNAYLERELRHSISKIMNSYDGGMT 137
Query: 134 FLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCVSIPS 192
L ++ S +G+LG V G+ +I+ ++ + G I E+L++ LGL V+IP+
Sbjct: 138 ALATIGSTAPFIGLLGTVWGIYHALINISQKGQMSIAEVSGPIGEALVATALGLFVAIPA 197
Query: 193 SIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+AYN F +KK + ++ FA++ L + E
Sbjct: 198 VLAYNCFTRGNKKLSRELHNFAHDLHVQLINEKE 231
>gi|170697552|ref|ZP_02888642.1| MotA/TolQ/ExbB proton channel [Burkholderia ambifaria IOP40-10]
gi|170137575|gb|EDT05813.1| MotA/TolQ/ExbB proton channel [Burkholderia ambifaria IOP40-10]
Length = 312
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 106/240 (44%), Gaps = 28/240 (11%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YGL AL+ + ++ LL + S+ SW ++I K V + + ++
Sbjct: 76 NPYGLG-------ALWANGDFVARFVLGLLVVMSLGSWYIMITKFVEQARANGRAKSADE 128
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDR--MMDV 119
W+ +L L + A + + + G + D +DR +D+
Sbjct: 129 QVWNAPTLAEGAAQLDDASPFRFIA---------ENAIEAGEHHDTALLDSVDRNTWIDL 179
Query: 120 AIARELEEITEKL----SFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIP 173
I R + ++ +L +FLG++ S VG+ G V G+ +I AG S + V+ P
Sbjct: 180 NIERSITSVSNRLQDGLAFLGTVGSTAPFVGLFGTVWGIYHALTAIGIAGQASIDKVAGP 239
Query: 174 GIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL---SRQTEGNIS 230
+ E+LI +GL V++P+ + YN + +K ++ F + +L R+ G+I+
Sbjct: 240 -VGEALIMTAIGLAVAVPAVLGYNFLVRRNKSVMERVRDFGAQLHTVLLAGGRRAAGSIA 298
>gi|119898621|ref|YP_933834.1| putative biopolymer transport protein ExbB [Azoarcus sp. BH72]
gi|119671034|emb|CAL94947.1| putative biopolymer transport protein ExbB [Azoarcus sp. BH72]
Length = 273
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 97/228 (42%), Gaps = 26/228 (11%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YGL AL+ K + +L + SI SW +I K L RQ +
Sbjct: 39 NPYGLE-------ALWSAGDFVAKGTLAILVVMSIGSWYIIFSKLYEQAKLNRQGNSANK 91
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRID--RMMDV 119
FW ++ ++L + SA KS + G+ ID + +
Sbjct: 92 TFWGAGDVDKGLETLDKN----------SAYHYIAKSGNDATAHHDGLLQFIDVNEWIQL 141
Query: 120 AIARELEEITEKL----SFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIP 173
+I R E++ +L +FL ++ S VG+ G V G+ +I AG S + V+ P
Sbjct: 142 SIHRATEKVQSRLQGGLAFLATVGSTAPFVGLFGTVWGIYHALTAIGVAGQASIDKVAGP 201
Query: 174 GIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+ E+LI +GL V++P+ + YN + +K + F E A+L
Sbjct: 202 -VGEALIMTAIGLAVAVPAVLGYNWLVRRNKAALEDVRSFGAELHAVL 248
>gi|329905535|ref|ZP_08274158.1| MotA/TolQ/ExbB proton channel family protein [Oxalobacteraceae
bacterium IMCC9480]
gi|327547569|gb|EGF32371.1| MotA/TolQ/ExbB proton channel family protein [Oxalobacteraceae
bacterium IMCC9480]
Length = 238
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 88/215 (40%), Gaps = 4/215 (1%)
Query: 9 MDISIF---ALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS 65
M++S + +L+ Q + +K + LL S+ SW VII + V + LRR FW
Sbjct: 1 MEVSPYGLESLWQQGDIVIKAVALLLIAMSVASWFVIITRGVQLLRLRRSAALVGLRFWD 60
Query: 66 GQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
S+ + L + A SA + + D + + I
Sbjct: 61 ASSMAQGVERLGRDNPFAELAQAGSAAMAHHATHQGHLHDQLSKSDWVTMSLRQGIDDAA 120
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILL 184
+ + ++ L S+ S VG+ G V G+ +I + + G + ESLI L
Sbjct: 121 GRLQQGMAVLASVGSTAPFVGLFGTVWGIYHALVAIGTSGQAGIDKVAGPVGESLIMTAL 180
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
GL V+IP++ YN + +K Q+ F + A
Sbjct: 181 GLAVAIPATFGYNALVRGNKSTLAQLNKFGFDLHA 215
>gi|85713848|ref|ZP_01044837.1| MotA/TolQ/ExbB proton channel [Nitrobacter sp. Nb-311A]
gi|85717558|ref|ZP_01048502.1| MotA/TolQ/ExbB proton channel [Nitrobacter sp. Nb-311A]
gi|85695639|gb|EAQ33553.1| MotA/TolQ/ExbB proton channel [Nitrobacter sp. Nb-311A]
gi|85698974|gb|EAQ36842.1| MotA/TolQ/ExbB proton channel [Nitrobacter sp. Nb-311A]
Length = 205
Score = 65.1 bits (157), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 81/173 (46%), Gaps = 4/173 (2%)
Query: 35 SILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSE 94
S+++W++ I K V RR + +SL +L + LA++ SAM E
Sbjct: 3 SLVTWTICIAKMVELSLARRNLGTALREISESRSLAEAQMALGARDGV-LASLLASAMHE 61
Query: 95 WKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGM 154
+ S G S GI++R + E + + L ++ + VG+ G V G+
Sbjct: 62 ARLSA--GISSDAGIKERAASSFAEIVRAESRRVRLGMGLLATIGATSPFVGLFGTVWGI 119
Query: 155 MGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKF 206
M F I+ + N+ V PGI E+L++ LGL +IP+ I YN F +K +
Sbjct: 120 MNSFIGISKAQTTNLAVVAPGIAEALLATALGLVAAIPAVIIYNHFARVTKGY 172
>gi|227821912|ref|YP_002825882.1| biopolymer transport ExbB protein [Sinorhizobium fredii NGR234]
gi|227340911|gb|ACP25129.1| biopolymer transport ExbB protein [Sinorhizobium fredii NGR234]
Length = 316
Score = 65.1 bits (157), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 96/193 (49%), Gaps = 7/193 (3%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S +F+ + VK ++ L + S+ +W++ + K++ + + + ++ + + L
Sbjct: 76 DLSPVGMFLAADMVVKSVMISLALASVATWAIFLVKTLELAFAKSRMKRALRVLAAARGL 135
Query: 70 ETVCKSLKNHHNIGLAA-IFMSAMSEWKKSCDKGARSPI-GIQDRIDRMMDVAIARELEE 127
V K G A + +A+ E +S +P+ GI++R+ ++ R +
Sbjct: 136 AEVELDRKA----GAAGQMIAAAVDEVARSEAVLDHAPVAGIKERVASLLARIEVRAGKR 191
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
++ L S+ S G VG+ G V G+M F I+ + N+ + PGI E+L++ +GL
Sbjct: 192 MSAGTGILASIGSVGPFVGLFGTVWGIMNSFIGISKAQTTNLAIVAPGIAEALLATAIGL 251
Query: 187 CVSIPSSIAYNKF 199
+IP+ + YN F
Sbjct: 252 VAAIPAVVIYNYF 264
>gi|75676490|ref|YP_318911.1| MotA/TolQ/ExbB proton channel [Nitrobacter winogradskyi Nb-255]
gi|74421360|gb|ABA05559.1| outer membrane transport energization protein ExbB [Nitrobacter
winogradskyi Nb-255]
Length = 320
Score = 65.1 bits (157), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 106/225 (47%), Gaps = 7/225 (3%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
++S +++FM + V+ ++ L S+++W++ I K RR R +SL
Sbjct: 94 ELSPWSMFMSADIVVQLVMIGLAFASLVTWTICIAKLAELSLARRALRAALNKIGDARSL 153
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+L + LA++ SAM E + S G S GI++R + E I
Sbjct: 154 AEAQMALGAREGV-LASLLASAMHEARLSA--GISSDAGIKERAASSFAEIVRAESRRIR 210
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCV 188
+ L ++ + VG+ G V G+M F I+ + N+ V PGI E+L++ LGL
Sbjct: 211 LGMGLLATIGATSPFVGLFGTVWGIMNSFIGISKSQTTNLAVVAPGIAEALLATALGLVA 270
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR---QTEGNIS 230
+IP+ I YN F ++ + + + +LSR +T G+++
Sbjct: 271 AIPAVIIYNYFARVTRGYTELVGRASGAAGRLLSRDLDRTHGSLT 315
>gi|261855192|ref|YP_003262475.1| MotA/TolQ/ExbB proton channel [Halothiobacillus neapolitanus c2]
gi|261835661|gb|ACX95428.1| MotA/TolQ/ExbB proton channel [Halothiobacillus neapolitanus c2]
Length = 237
Score = 65.1 bits (157), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 101/213 (47%), Gaps = 17/213 (7%)
Query: 15 ALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCK 74
+L+ Q L ++ + LL S+L+W ++Q+ + LR R FEQ FW Q
Sbjct: 9 SLWQQSDLIIRSVALLLLAMSVLTWFYVLQRLSFMLRLRGVSRRFEQ-FWHTQGYSEGLA 67
Query: 75 SLKNHHNIG----LAAIFMSAMSE-WKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
L +I LA + A+ + S D ++ P + + +++ ++++I
Sbjct: 68 LLGKPGHINPFRTLADSAVEAVEHYYSHSTDLHSQLP------LSEWLSLSLTSKIDDIQ 121
Query: 130 E----KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILL 184
E +S L S+ + +G+ G V G+ ++I S N+ +I G + E+L+
Sbjct: 122 EFFRQGMSALASIGAVAPFIGLFGTVWGIYHALENIGQTGSANLATIAGPVGEALVMTAF 181
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEF 217
GL V+IP+ +AYN +++ +++ FA +
Sbjct: 182 GLAVAIPAVLAYNAINRQNRQLIARVQRFAQQL 214
>gi|296159357|ref|ZP_06842182.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. Ch1-1]
gi|295890341|gb|EFG70134.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. Ch1-1]
Length = 301
Score = 65.1 bits (157), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 101/228 (44%), Gaps = 25/228 (10%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YGL AL+ + ++ LL + S+ SW +++ K V R+ + ++
Sbjct: 72 NPYGLG-------ALWKNGDFVARFVLILLVLMSMGSWYIMVTKFVEQFRANRRAKSADE 124
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDR--MMDV 119
W+ SL K L A + + + G + + +DR +D
Sbjct: 125 QLWTAPSLVEGAKLLDEASPFRFIA---------ETAIEAGEHHEEALLEAVDRNTWIDT 175
Query: 120 AIARELEEITEKL----SFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIP 173
++ R + ++ +L +FLG++ S VG+ G V G+ +I AG S + V+ P
Sbjct: 176 SVERAITNVSNRLQDGLAFLGTVGSTAPFVGLFGTVWGIYHALTAIGIAGQASIDKVAGP 235
Query: 174 GIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+ E+LI +GL V++P+ + YN + +K ++ F + +L
Sbjct: 236 -VGEALIMTAIGLAVAVPAVLGYNFLVRRNKSVMERVRAFGAQLHTVL 282
>gi|297537933|ref|YP_003673702.1| MotA/TolQ/ExbB proton channel [Methylotenera sp. 301]
gi|297257280|gb|ADI29125.1| MotA/TolQ/ExbB proton channel [Methylotenera sp. 301]
Length = 569
Score = 65.1 bits (157), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 103/217 (47%), Gaps = 11/217 (5%)
Query: 16 LFMQMGLAVKCIITLLFI-FSILSWSVIIQKSVNFITLRRQFREFEQLFW--SGQSLETV 72
L + + K +I +L + F+I W V+ K++ + ++F F SG L ++
Sbjct: 354 LINSLTIDAKVVIAILAVMFAISVW-VMWSKAMLVSRTDKDNKKFLARFQKTSGDDLLSL 412
Query: 73 CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPI--GIQDRIDRMMDVAIARELEEITE 130
K N+ N L ++ + + E KK +G + + D I +D + RE +
Sbjct: 413 DKG-ANYPNSSLFKLYQAGVREMKKRQHEGEKLSLSGASMDAIKAAIDADLVRETQRQNA 471
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCVS 189
+ L S G +G+LG V+G+M F +IA NV +I PGI +L++ + GL V+
Sbjct: 472 GMVLLTIAISGGPFLGLLGTVVGVMITFAAIAAAGDVNVNAIAPGIAAALLATVAGLAVA 531
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
IP+ YN K + M+ F +EF ++R E
Sbjct: 532 IPALFGYNYLASRVKNITIAMQIFVDEF---VTRSAE 565
>gi|223939355|ref|ZP_03631234.1| MotA/TolQ/ExbB proton channel [bacterium Ellin514]
gi|223891959|gb|EEF58441.1| MotA/TolQ/ExbB proton channel [bacterium Ellin514]
Length = 258
Score = 65.1 bits (157), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 96/212 (45%), Gaps = 14/212 (6%)
Query: 17 FMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSL 76
F + L K I L + S+ SW+VII K RR ++F + + S + + +
Sbjct: 17 FSKATLEGKITICCLIVVSLFSWTVIITKIRQLYRARRMAKKFYESYRSTRDPLEIFRKQ 76
Query: 77 KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQ----------DRIDRMMDVAIARELE 126
+ ++ + E +P+ ++ D + ++ ++ E
Sbjct: 77 EEFDGAPANEVYYTGAEELDYHLKN---NPVMVKGQTRISSAGFDSVKVSLERSVGTESL 133
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLG 185
+ + + L + + G +G+LG V G+M F +A S ++ ++ PG+ +LI+ ++G
Sbjct: 134 NLEKGMIVLSTAVAGGPFIGLLGTVWGVMETFSGVARANSASLTAMAPGVAGALIATVVG 193
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEF 217
L V+IP+ AYN + + +++ FA E+
Sbjct: 194 LLVAIPAMFAYNFMVTSIRAITQELDNFATEY 225
>gi|292491864|ref|YP_003527303.1| tonB-system energizer ExbB [Nitrosococcus halophilus Nc4]
gi|291580459|gb|ADE14916.1| tonB-system energizer ExbB [Nitrosococcus halophilus Nc4]
Length = 311
Score = 65.1 bits (157), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 100/197 (50%), Gaps = 15/197 (7%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S + +F+ VK +I L SI++W++ + KS+ +R+ R + ++L
Sbjct: 75 DLSPWGMFLGADWVVKAVILGLVFASIVTWTIGLAKSLELGMGKRRLRGALERLGEVRTL 134
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARS---PIGIQDRIDR---MMDVAIAR 123
KSL++ +I ++F + +K D A S GI++RI ++VA +R
Sbjct: 135 GEGMKSLRDEESI--VSLFADVV---EKELDFFADSIPEKEGIKERIATGLGRIEVAASR 189
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISI 182
+ T L+ +GS + VG+ G V G+M F I+ + N+ V PGI E+L+
Sbjct: 190 RISRGTGILATIGSTAP---FVGLFGTVWGIMNSFIGISEAQTTNLAVVAPGIAEALLVT 246
Query: 183 LLGLCVSIPSSIAYNKF 199
+GL +IP+ + YN F
Sbjct: 247 AIGLIAAIPAVVIYNFF 263
>gi|183601006|ref|ZP_02962499.1| hypothetical protein PROSTU_04622 [Providencia stuartii ATCC 25827]
gi|188019339|gb|EDU57379.1| hypothetical protein PROSTU_04622 [Providencia stuartii ATCC 25827]
Length = 310
Score = 65.1 bits (157), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 105/220 (47%), Gaps = 10/220 (4%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFR-EFEQLFWSGQS 68
D+S++ ++ VK ++ L + S+++W++ K + + RR+ + E QL +S
Sbjct: 87 DLSVWGMYQNADNVVKTVMIGLVLASVITWALFFSKGIELLAARRRLKAEVAQLN-KVKS 145
Query: 69 LE---TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
L+ ++ + K + L + A+ E S S GI+DR ++ +IA
Sbjct: 146 LDEAMSIAEGFKANSVTRL--LLKQAVVERTLSAQSTDLS--GIKDRTGFRLERSIAAIS 201
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILL 184
+ +L ++ + VG+ G V G+M F IA + N+ V PGI E+L++ +
Sbjct: 202 RHMGRGNGYLATIGAISPFVGLFGTVWGIMNSFIGIAHSQTTNLAVVAPGIAEALLATAI 261
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
GL +IP+ + YN F + Q+ A + + +L R
Sbjct: 262 GLIAAIPAVVIYNIFARMINNYRGQVGDVAAQAALLLGRD 301
>gi|281357073|ref|ZP_06243563.1| MotA/TolQ/ExbB proton channel [Victivallis vadensis ATCC BAA-548]
gi|281316631|gb|EFB00655.1| MotA/TolQ/ExbB proton channel [Victivallis vadensis ATCC BAA-548]
Length = 353
Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 98/212 (46%), Gaps = 21/212 (9%)
Query: 25 KCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ----SLETVCKSLKNHH 80
K I+ LL I S+ +WSV+I K + R+ F F + + + + V + +
Sbjct: 26 KGIVVLLLIGSVFTWSVMIDKGMALYRARQCSNRFLARFRANKKNIATPQLVREGSADPG 85
Query: 81 NIGLAAIFMSAMS---EWKKSCDKGARSPIGIQDRIDRMMDVA-----------IARELE 126
IG AI+ + + E+ +S + + I R R+ D ++ +++
Sbjct: 86 PIG--AIYSAGVERLLEFYESDSRSQQYSTAISTRPSRLSDAQYNAIEAVLEREVSSQIQ 143
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLG 185
++ ++ FL ++ S G+ G V G+M F IA ++ ++ PG+ +L++ + G
Sbjct: 144 QLETRIGFLATLVSVSPFCGLFGTVWGVMLAFCGIAAAGKSDFTALAPGVAGALLTTVAG 203
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEF 217
L V+IPS + YN + + M+ F EF
Sbjct: 204 LIVAIPSLVGYNLLTATIRTLTITMDNFTEEF 235
>gi|217977011|ref|YP_002361158.1| tonB-system energizer ExbB [Methylocella silvestris BL2]
gi|217502387|gb|ACK49796.1| tonB-system energizer ExbB [Methylocella silvestris BL2]
Length = 348
Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 101/216 (46%), Gaps = 5/216 (2%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S + +F+ VK ++ L S+++W++ + KS++ R R + + L
Sbjct: 114 DLSPWGMFLHADRIVKGVMIGLAFASLVTWTIWLVKSLDLWRARASARRDLEAVTEAEDL 173
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+ K+ + +A +A SE +S A G+++RI ++ + ++
Sbjct: 174 RAAQTTFKDQRSP-VARFVEAARSEEDRSRGLPAE---GVKERIAALLVRLESHAGRKMA 229
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCV 188
S + ++ + VG+ G V G+M F I+ ++ N+ V PGI E+L++ +GL
Sbjct: 230 RGTSVVATIGATAPFVGLFGTVWGIMDSFIGISKSHTTNLAVVAPGIAEALLATAMGLIA 289
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+IP+ + YN F + Q+ A E +SR
Sbjct: 290 AIPAVMIYNVFARGITGYKAQLGDAAAEVLRHVSRD 325
>gi|288962267|ref|YP_003452562.1| biopolymer transport protein [Azospirillum sp. B510]
gi|288914533|dbj|BAI76018.1| biopolymer transport protein [Azospirillum sp. B510]
Length = 386
Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 94/190 (49%), Gaps = 6/190 (3%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S + +F+ V+ ++ L + S+++W++ I K+V + +R+ R + +SL
Sbjct: 143 DLSPWGMFVTASPVVQAVMVGLALASVVTWTIAIAKTVELSSAKRKARAALAMLEEARSL 202
Query: 70 ETVCKSLKNHHNIGLAAIFMSA-MSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ K + G AA + A ++E S D +R G+ DR ++ A +
Sbjct: 203 SQAAE--KVGFSQGTAATLVRAVLAETHLSADAPSRE--GLMDRAASRLERIEAAAGRRM 258
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
L ++ S G +G+ G V G+M F I+ + N+ V PGI E+L++ +GL
Sbjct: 259 ARGTGILATIGSTGPFIGLFGTVWGIMTSFIGISRAQTTNLAVVAPGIAEALLATAIGLV 318
Query: 188 VSIPSSIAYN 197
+IP+ + YN
Sbjct: 319 AAIPAVVVYN 328
>gi|194365976|ref|YP_002028586.1| MotA/TolQ/ExbB proton channel [Stenotrophomonas maltophilia R551-3]
gi|194348780|gb|ACF51903.1| MotA/TolQ/ExbB proton channel [Stenotrophomonas maltophilia R551-3]
Length = 594
Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 100/215 (46%), Gaps = 14/215 (6%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFW--SGQSLETVC------KSLK 77
++ +L + ++SW+++I KS +F + F + F SG L T+ K+
Sbjct: 373 VVVAILGLMMLMSWAIMIAKSRHFGRTSKANAVFTESFGKLSGVPLRTLSEMDRQGKAPT 432
Query: 78 NHHNIGLAAIFMSAMSEWKKSCDKGARSPI---GIQDRIDRMMDVAIARELEEITEKLSF 134
H+ L I+ A+ E ++ + S I MD + RE E + ++++
Sbjct: 433 AMHDGSLWRIYQVAIDEMQQRHQRDGNSGYLSGATIAAIRASMDAVMVREQEAMARRMNW 492
Query: 135 LGSMSSAGLLVGILGAVLGMMGFF--QSIAGYYSNNVVSIPGIIESLISILLGLCVSIPS 192
L + VG+ G V+G+M F ++AG N V+ PG+ +L+ GL V+IP+
Sbjct: 493 LSTTIEGAPYVGLFGTVIGIMLVFVVAAMAGAVDINSVA-PGMAAALLCTAAGLGVAIPA 551
Query: 193 SIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEG 227
YN ++ M F +EF+A L+ + +G
Sbjct: 552 LFGYNYLGARAEAIGADMAVFIDEFAARLAEEQDG 586
>gi|171322985|ref|ZP_02911656.1| MotA/TolQ/ExbB proton channel [Burkholderia ambifaria MEX-5]
gi|171091638|gb|EDT37214.1| MotA/TolQ/ExbB proton channel [Burkholderia ambifaria MEX-5]
Length = 222
Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 95/216 (43%), Gaps = 13/216 (6%)
Query: 17 FMQMGLAV-KCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKS 75
+++ G A+ + +L S+ SW ++ K+ + +RQ FW SL+ +
Sbjct: 10 YLESGDAITHAVAYVLLAMSVASWCFLLMKAWLLVRAKRQGPRALAAFWRAASLDAGIDA 69
Query: 76 LKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDV--AIARELEEITEKLS 133
L +F+ + + D+ P + R++R V A+ + +L
Sbjct: 70 LAGADR---ERVFVPLAEAARDAADQ--HDPAALAARVERSERVLRALRHAMLRSQRRLE 124
Query: 134 F----LGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCV 188
F L S+ S VG+LG V G+ SIA + ++ G + E+LI GL V
Sbjct: 125 FGQVLLASIGSTAPFVGLLGTVWGIYHALGSIAASGQAQIENVAGPVGEALIMTAFGLVV 184
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+IP+ +AYN ++ A +++GFA + + Q
Sbjct: 185 AIPAVLAYNILGRLVRQLAEELDGFARDLHVFVCAQ 220
>gi|158522224|ref|YP_001530094.1| Tol-Pal system TolQ [Desulfococcus oleovorans Hxd3]
gi|158511050|gb|ABW68017.1| Tol-Pal system TolQ [Desulfococcus oleovorans Hxd3]
Length = 240
Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 106/225 (47%), Gaps = 12/225 (5%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+ I ++ + GL V+ ++ LL FS+ SW++I K RQ EF + FW +
Sbjct: 5 LDIVSMLLNAGLMVQFVLLLLLFFSVTSWTIIFIKYTYIRHALRQSLEFSEYFWKKRDFS 64
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDR---------IDRMMDVAI 121
KN + +A +F + SE+K+ R+ G + I+R + I
Sbjct: 65 EAFAKAKNLDSSPVAQVFRAGYSEFKRFSTPSTRTGSGESENNFDVPVIKSIERALSRGI 124
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA--GYYSNNVVSIPGIIESL 179
E ++ + FL + + +G+ G V G+M F I G S VV+ PGI E+L
Sbjct: 125 TAETAKLNRLVPFLATTGNTTPFIGLFGTVWGIMNSFHGIGERGAASLAVVA-PGISEAL 183
Query: 180 ISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
++ GL +IP+ +AYN F + +M FA++F I+ RQ
Sbjct: 184 VATAAGLAAAIPAVVAYNYFTGKIRVIDSEMRNFASDFLNIIERQ 228
>gi|227113236|ref|ZP_03826892.1| putative biopolymer transport protein [Pectobacterium carotovorum
subsp. brasiliensis PBR1692]
Length = 238
Score = 64.7 bits (156), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 101/202 (50%), Gaps = 13/202 (6%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS----GQSLETVCKSLKNHHN 81
+I LL +FS+++W + + K V + +R+ R F FW Q+ ET K + N
Sbjct: 14 AVILLLLLFSLVTWGLGLLKFVQYGRAQRRDRRFRAAFWQQDDVSQTPETSAKQPGSLAN 73
Query: 82 IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSA 141
+ LAA+ + + + I + DR++R + I RE + L+ L S+ S
Sbjct: 74 LALAAVKAPERISGQLALN------IHLPDRVERALQQQIQRERRSLESGLAVLASIGST 127
Query: 142 GLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKF 199
+G+ G V G+M Q I +G S + V+ P I +LI+ +G+ V++P+ + YN F
Sbjct: 128 SPFIGLFGTVWGIMAALQEIGLSGSASLDTVAGP-IGNALIATGIGIAVAVPAVLIYNYF 186
Query: 200 IEDSKKFAMQMEGFANEFSAIL 221
+ K M+ FA++ +++
Sbjct: 187 LRRLKLAVADMDDFAHDVYSVM 208
>gi|295700974|ref|YP_003608867.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. CCGE1002]
gi|295440187|gb|ADG19356.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. CCGE1002]
Length = 302
Score = 64.7 bits (156), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 101/228 (44%), Gaps = 25/228 (10%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YGL AL+ + ++ LL I S+ SW +++ K R+ + ++
Sbjct: 72 NPYGLG-------ALWKNGDFVARFVLLLLVIMSMGSWYIMVTKFFEQFRANRRAKHADE 124
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDR--MMDV 119
WS SL + L A + + + G + + +DR +DV
Sbjct: 125 QLWSAPSLTEGAQQLDESSPFRFIA---------ETAIEAGQHHDEALLEAVDRNTWIDV 175
Query: 120 AIARELEEITEK----LSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIP 173
++ R + ++ + L+FL ++ S +G+ G V G+ +I AG S + V+ P
Sbjct: 176 SVERAITNVSNRMQDGLAFLATVGSTAPFIGLFGTVWGIYHALTAIGIAGQASIDKVAGP 235
Query: 174 GIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+ E+LI +GL V++P+ + YN + +K ++ F + A+L
Sbjct: 236 -VGEALIMTAIGLGVAVPAVLGYNFLVRRNKSVMERVRAFGAQLHAVL 282
>gi|209964014|ref|YP_002296929.1| biopolymer transport ExbB protein [Rhodospirillum centenum SW]
gi|209957480|gb|ACI98116.1| biopolymer transport ExbB protein [Rhodospirillum centenum SW]
Length = 337
Score = 64.7 bits (156), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 109/235 (46%), Gaps = 29/235 (12%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YGL+ AL+ Q K + + I S+ +W +++ K L RQ + +
Sbjct: 114 NPYGLS-------ALWAQGDFVSKGTLVAMIIMSMGTWYIMLTKLFEQSRLLRQAKVARK 166
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDK--GARSPIGIQDRID--RMM 117
FW+ S+ K L G ++F S + +S + GA + D+ID +
Sbjct: 167 EFWTAGSITEGAKRL------GDKSVFRSIVESGVRSAEHHDGA-----LTDQIDLHTWV 215
Query: 118 DVAIARELE----EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVS 171
+++ R +E + E L+FL ++ S VG+ G V G+ +I +G S + V+
Sbjct: 216 TMSLQRTVETTQSRLQEGLAFLATVGSTAPFVGLFGTVWGIYHALVAIGLSGQASIDKVA 275
Query: 172 IPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
P + E+LI +GL V++P+ + YN + +K + F+ + A+L QT
Sbjct: 276 GP-VGEALIMTAIGLAVAVPAVLGYNWLVRRNKACTDALRSFSADLHAVLLAQTH 329
>gi|171318720|ref|ZP_02907862.1| MotA/TolQ/ExbB proton channel [Burkholderia ambifaria MEX-5]
gi|171096087|gb|EDT41014.1| MotA/TolQ/ExbB proton channel [Burkholderia ambifaria MEX-5]
Length = 312
Score = 64.7 bits (156), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 105/240 (43%), Gaps = 28/240 (11%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YGL AL+ + ++ LL + S+ SW ++I K V + + ++
Sbjct: 76 NPYGLG-------ALWANGDFVARFVLGLLVVMSLGSWYIMITKFVEQARANGRAKSADE 128
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDR--MMDV 119
W+ +L L + A + + + G + D +DR +D+
Sbjct: 129 QVWNAPTLAEGAAQLDDASPFRFIA---------ENAIEAGEHHDTALLDSVDRNTWIDL 179
Query: 120 AIARELEEITEKL----SFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIP 173
I R + ++ +L +FLG++ S VG+ G V G+ +I AG S + V+ P
Sbjct: 180 NIERSITSVSNRLQDGLAFLGTVGSTAPFVGLFGTVWGIYHALTAIGIAGQASIDKVAGP 239
Query: 174 GIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL---SRQTEGNIS 230
+ E+LI +GL V++P+ + YN + +K ++ F + +L R+ G I+
Sbjct: 240 -VGEALIMTAIGLAVAVPAVLGYNFLVRRNKSVMERVRDFGAQLHTVLLAGGRRAAGGIA 298
>gi|241589562|ref|YP_002979587.1| MotA/TolQ/ExbB proton channel [Ralstonia pickettii 12D]
gi|240868274|gb|ACS65933.1| MotA/TolQ/ExbB proton channel [Ralstonia pickettii 12D]
Length = 303
Score = 64.7 bits (156), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 108/228 (47%), Gaps = 25/228 (10%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YGL+ AL+ + ++ LL I S+ SW +++ K + + R+ + +
Sbjct: 70 NPYGLS-------ALWNNGDFVARFVLMLLVIMSMGSWYIMVTKFLEQMRANRRAKNADD 122
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDR--MMDV 119
WS SL K L A++F ++E + + G + + +DR +DV
Sbjct: 123 QLWSAPSLAAGAKLLDE------ASLFRF-LAE--TAVEAGEHHDEALLESVDRNTWIDV 173
Query: 120 AIARELEEITEK----LSFLGSMSSAGLLVGILGAVLGMMGFFQS--IAGYYSNNVVSIP 173
++ R + ++ + L+FL ++ S +G+ G V G+ + IAG S + V+ P
Sbjct: 174 SVERAITNVSNRLQDGLAFLATVGSTAPFIGLFGTVWGIYHALTAIGIAGQASIDKVAGP 233
Query: 174 GIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+ E+LI +GL V++P+ + YN + +K ++ F + A++
Sbjct: 234 -VGEALIMTAIGLAVAVPAVLGYNFLVRRNKSVMERVRAFGAQLHAVV 280
>gi|303326619|ref|ZP_07357061.1| TolQ protein [Desulfovibrio sp. 3_1_syn3]
gi|302862607|gb|EFL85539.1| TolQ protein [Desulfovibrio sp. 3_1_syn3]
Length = 229
Score = 64.7 bits (156), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 91/192 (47%), Gaps = 3/192 (1%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
MD I A+ +Q L K ++ LL SI SW+ + K + +R+ E F
Sbjct: 1 MDSLIHAV-LQATLISKFVLVLLLAMSIASWTYMCGKWLTLRAAQRRAHEGLSAFDKAGE 59
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
L+ + L I A+ E+ + G + + D + R + IA E+ ++
Sbjct: 60 LKRALPIVAADERSPLYGITRRAVREYNRITRTGDTERL-LNDNVRRALHFGIAEEIAKL 118
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLC 187
L+ L + ++ +G+ G V G+M F +IA S ++ ++ PGI E+LI+ +GL
Sbjct: 119 KSSLALLATAANTAPFIGLFGTVWGIMHSFTAIAKMKSVSLATVAPGIAEALIATAVGLF 178
Query: 188 VSIPSSIAYNKF 199
V+IP+ YN F
Sbjct: 179 VAIPAVCGYNMF 190
>gi|75675459|ref|YP_317880.1| MotA/TolQ/ExbB proton channel [Nitrobacter winogradskyi Nb-255]
gi|74420329|gb|ABA04528.1| outer membrane transport energization protein ExbB [Nitrobacter
winogradskyi Nb-255]
Length = 318
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 106/225 (47%), Gaps = 7/225 (3%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
++S +++FM + V+ ++ L S+++W++ I K RR R +SL
Sbjct: 92 ELSPWSMFMSADIVVQLVMIGLAFASLVTWTICIAKLAELSLARRALRAALNKIGDARSL 151
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+L + LA++ SAM E + S G S GI++R + E I
Sbjct: 152 AEAQMALGAREGV-LASLLASAMHEARLSA--GISSDAGIKERAASSFAEIVRAESRRIR 208
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCV 188
+ L ++ + VG+ G V G+M F I+ + N+ V PGI E+L++ LGL
Sbjct: 209 LGMGLLATIGATSPFVGLFGTVWGIMNSFIGISKSQTTNLAVVAPGIAEALLATALGLVA 268
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR---QTEGNIS 230
+IP+ I YN F ++ + + + +LSR +T G+++
Sbjct: 269 AIPAVIIYNYFARVTRGYTELVGRASGAAGRLLSRDLDRTHGSLT 313
>gi|253583882|ref|ZP_04861080.1| biopolymer transport exbB protein [Fusobacterium varium ATCC 27725]
gi|251834454|gb|EES63017.1| biopolymer transport exbB protein [Fusobacterium varium ATCC 27725]
Length = 209
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 97/191 (50%), Gaps = 22/191 (11%)
Query: 30 LLFIFSILSWSVIIQKSVNFIT----LRRQFRE-FEQLFWSGQSLET--VCKSLKNHHNI 82
LL + SIL I++++ F+ + ++F+E L +G+ E +C N +
Sbjct: 14 LLAVLSILGLGTILERTAYFMKNEQGITKEFKEEIVSLVRAGKEKEAMELCDKTNNSVSR 73
Query: 83 GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAG 142
+ +I ++ +E + + +++M ++E + +LS LG ++
Sbjct: 74 TVKSILLAYQNEDD------------LYESKEKLMKEKALEQIENLERRLSILGIVAYIS 121
Query: 143 LLVGILGAVLGMMGFFQSIA--GYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFI 200
+ G+LG VLGM+ F++IA G NVV+ GI E+L++ GL ++IP+ IAYN F
Sbjct: 122 PMAGLLGTVLGMIKSFKAIALQGAGDPNVVA-NGISEALLTTAAGLLIAIPAIIAYNTFN 180
Query: 201 EDSKKFAMQME 211
+ K +++E
Sbjct: 181 RKADKVMLEIE 191
>gi|154250831|ref|YP_001411655.1| TonB-system energizer ExbB type-1 [Parvibaculum lavamentivorans
DS-1]
gi|154154781|gb|ABS61998.1| TonB-system energizer ExbB type-1 [Parvibaculum lavamentivorans
DS-1]
Length = 309
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 98/198 (49%), Gaps = 18/198 (9%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S + +F+ + VK ++ L SI++W++ + K+ R + + + ++L
Sbjct: 83 DLSPWGMFLAADIVVKAVMIGLVFASIVTWTIWLAKNTEIARARSRAKSGFAALAASKTL 142
Query: 70 ETVCKSLKNH----HNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRID---RMMDVAIA 122
+ + L++ + AAI +S + DK G+++RI + ++ A
Sbjct: 143 DEAGEKLRSAKGPVQQLAQAAIHEMQLS--GTAPDKE-----GVKERIAWRFQRIEANTA 195
Query: 123 RELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLIS 181
RE+ T L+ +G+ + VG+ G V G+M F IA + N+ V PGI E+L++
Sbjct: 196 REIGIGTGVLATIGATAP---FVGLFGTVWGIMNSFIGIAHTQTTNLAVVAPGIAEALLA 252
Query: 182 ILLGLCVSIPSSIAYNKF 199
LGL +IP+ + YN F
Sbjct: 253 TGLGLVAAIPAVVIYNSF 270
>gi|190574648|ref|YP_001972493.1| putative transmembrane MotA/TolQ/ExbB transport protein
[Stenotrophomonas maltophilia K279a]
gi|190012570|emb|CAQ46198.1| putative transmembrane MotA/TolQ/ExbB transport protein
[Stenotrophomonas maltophilia K279a]
Length = 594
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 105/230 (45%), Gaps = 15/230 (6%)
Query: 12 SIFALFMQ-MGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFW--SGQS 68
S FA ++ M ++ +L + +LSW+++I K +F + F + F SG
Sbjct: 358 SHFAFILKAMPFDAWVVVAILGLMMLLSWAIMIAKGRHFGRTSKANAVFTESFGKLSGVP 417
Query: 69 LETVC------KSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPI---GIQDRIDRMMDV 119
L T+ K+ H+ L I+ A+ E ++ + S I MD
Sbjct: 418 LRTLSDMDRQGKAPTAMHDGSLWRIYQVAIDEMQQRHQRDGNSGYLSGATIAAIRASMDA 477
Query: 120 AIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFF--QSIAGYYSNNVVSIPGIIE 177
+ RE E + ++++L + VG+ G V+G+M F ++AG N V+ PG+
Sbjct: 478 VMVREQEAMARRMNWLSTTIEGAPYVGLFGTVIGIMLVFVVAAMAGAVDINSVA-PGMAA 536
Query: 178 SLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEG 227
+L+ GL V+IP+ YN ++ M F +EF+A L+ + +G
Sbjct: 537 ALLCTAAGLGVAIPALFGYNYLGARAEAIGADMAVFIDEFAARLAEEQDG 586
>gi|74316929|ref|YP_314669.1| MotA/TolQ/ExbB proton channel family protein [Thiobacillus
denitrificans ATCC 25259]
gi|74056424|gb|AAZ96864.1| MotA/TolQ/ExbB proton channel family [Thiobacillus denitrificans
ATCC 25259]
Length = 253
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 96/191 (50%), Gaps = 9/191 (4%)
Query: 39 WSVIIQKSV-NFITLRRQFREFEQLFWSGQSLETVCKSLKNH-HNIGLAAIFMSAMSEWK 96
W +I+ K++ N++ RR F + FW+ SL+ V +L+ + A + A+ +
Sbjct: 33 WYLIVTKALANYLAGRRA-DAFLKQFWASDSLQEVRAALRTQPRDNAFAELAHDALEAAE 91
Query: 97 KSCDKGAR---SPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLG 153
G + + G+ + + R++ I +E L+ + S SA +G+ G V G
Sbjct: 92 DDHQHGVQKLAAAGGLGEFLTRLLRNGIDQEAMRAERGLTVMASAGSAAPYIGLFGTVWG 151
Query: 154 MMGFFQSI--AGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
+ +I AG + + VS P + E+LI LGL V+IP+ +AYN F ++ + +++
Sbjct: 152 IYHALVNIGLAGQGTLDKVSGP-VGEALIMTALGLAVAIPAVLAYNAFNRRNRVWLARLD 210
Query: 212 GFANEFSAILS 222
FA++ +L+
Sbjct: 211 AFAHDLYTVLT 221
>gi|299134911|ref|ZP_07028103.1| tonB-system energizer ExbB [Afipia sp. 1NLS2]
gi|298590721|gb|EFI50924.1| tonB-system energizer ExbB [Afipia sp. 1NLS2]
Length = 307
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 95/204 (46%), Gaps = 16/204 (7%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S +++FM + VK ++ L S+++W++ F +R QF ++L +L
Sbjct: 82 DLSPWSMFMSADIVVKLVMIGLAFASLMTWTIC------FAKMREQFVAQQRL---KAAL 132
Query: 70 ETVCKS---LKNHHNIGLAAIFMS---AMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAR 123
TV S + +G +S AM+ + G GI++R +
Sbjct: 133 RTVSNSRTLAEARMALGTGKTVLSSFLAMAVHEVRLSSGIVGDTGIKERAASLFAELTRS 192
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISI 182
E + + L ++ + VG+ G V G+M F I+ + N+ V PGI E+L++
Sbjct: 193 EARRMRLGMGMLATIGATAPFVGLFGTVWGIMNSFIGISKMQTTNLAVVAPGIAEALLAT 252
Query: 183 LLGLCVSIPSSIAYNKFIEDSKKF 206
+GL +IP+ I YN F +K++
Sbjct: 253 AMGLVAAIPAVIIYNHFSRVTKRY 276
>gi|209515327|ref|ZP_03264194.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. H160]
gi|209504308|gb|EEA04297.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. H160]
Length = 302
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 101/228 (44%), Gaps = 25/228 (10%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YGL AL+ + ++ LL I S+ SW +++ K R+ + ++
Sbjct: 72 NPYGLG-------ALWKNGDFVARFVLLLLVIMSMGSWYIMVTKFFEQFRASRRAKHADE 124
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDR--MMDV 119
WS SL + L A + + + G + + +DR +DV
Sbjct: 125 QLWSAPSLTEGAQQLDESSPFRFIA---------ETAIEAGQHHDEALLEAVDRNTWIDV 175
Query: 120 AIARELEEITEK----LSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIP 173
++ R + ++ + L+FL ++ S +G+ G V G+ +I AG S + V+ P
Sbjct: 176 SVERAITNVSNRMQDGLAFLATVGSTAPFIGLFGTVWGIYHALTAIGIAGQASIDKVAGP 235
Query: 174 GIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+ E+LI +GL V++P+ + YN + +K ++ F + A+L
Sbjct: 236 -VGEALIMTAIGLGVAVPAVLGYNFLVRRNKSVMERVRAFGAQLHAVL 282
>gi|222872011|gb|EEF09142.1| predicted protein [Populus trichocarpa]
Length = 217
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 87/191 (45%), Gaps = 9/191 (4%)
Query: 35 SILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSL--KNHHNIGLAAIFMSAM 92
S+LSW VI+ K+ + I L++ E+ FW + +L + + + A+
Sbjct: 2 SLLSWIVILTKAWDLIRLKKMAHGAEKRFWHSDDFDHALDTLGANDANPFRMLAVTGREA 61
Query: 93 SEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVL 152
++ ++ + I D + R + AI + + L+ L S+ S VG+ G V
Sbjct: 62 AQHHRASQPQLHDALDISDWLTRSLKSAIDEAVARMQSGLAILASVGSTAPFVGLFGTVW 121
Query: 153 GMMGFFQSIAGYYSNNVVSIPGII----ESLISILLGLCVSIPSSIAYNKFIEDSKKFAM 208
G+ + ++ G ++ V +I + E+LI GL V+IP+ + YN +K
Sbjct: 122 GI---YHALIGIGASGVPTIDKVAGPVGEALIMTAFGLAVAIPAVLGYNALSRGNKGVIS 178
Query: 209 QMEGFANEFSA 219
++ FA++ A
Sbjct: 179 KLNRFAHDLHA 189
>gi|192289842|ref|YP_001990447.1| tonB-system energizer ExbB [Rhodopseudomonas palustris TIE-1]
gi|192283591|gb|ACE99971.1| tonB-system energizer ExbB [Rhodopseudomonas palustris TIE-1]
Length = 257
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 99/198 (50%), Gaps = 15/198 (7%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S + +F + VK ++ L + S+ +W+V + K++ + R+ + +L
Sbjct: 35 DLSAWGMFKNADIVVKVVMAGLALASLATWTVWLSKTIELRRETARARDGLSKLETDTTL 94
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSE-----WKKSCDKGARSPIGIQDRIDRMMDVAIARE 124
+ + + H+ ++ + +A E W D R + R++R+ + A+AR+
Sbjct: 95 AELGRGSEGAHD-AVSQLIQTAAREGSLSGWTFDADFKERVAL----RLERV-EAAMARK 148
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISIL 183
+ T L+ +G+++ VG+ G V G+M F I+ ++ N+ V PGI E+L++
Sbjct: 149 IASGTGILATVGAVAP---FVGLFGTVWGIMNAFIGISEAHTTNLAVVAPGIAEALLATA 205
Query: 184 LGLCVSIPSSIAYNKFIE 201
LGL ++P+ + YN +
Sbjct: 206 LGLVAAVPAVVIYNYLVR 223
>gi|260467352|ref|ZP_05813525.1| tonB-system energizer ExbB [Mesorhizobium opportunistum WSM2075]
gi|259028879|gb|EEW30182.1| tonB-system energizer ExbB [Mesorhizobium opportunistum WSM2075]
Length = 238
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 98/197 (49%), Gaps = 13/197 (6%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S + +FM + VK ++ L S+++W++ + KS+ + + + + +L
Sbjct: 8 DLSPWGMFMAADIIVKGVMIGLAFASLVTWTIWLAKSLEILGGKLRISRAVRAIGDAATL 67
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPI---GIQDRIDRMM---DVAIAR 123
+ ++L G A+ + A E + + GA + G+++R+ + + A +R
Sbjct: 68 KQASRALDRSGGPG--ALLVRAAEE-ETTLSAGALDHVSGDGLKERVASRLSRIEAAASR 124
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISI 182
+ T L+ +GS + VG+ G V G+M F I+ + N+ V PGI E+L++
Sbjct: 125 RMSRGTGVLATIGSTAP---FVGLFGTVWGIMNAFIGISQAQTTNLAVVAPGIAEALLAT 181
Query: 183 LLGLCVSIPSSIAYNKF 199
+GL +IP+ + YN F
Sbjct: 182 AMGLVAAIPAVVIYNVF 198
>gi|323698928|ref|ZP_08110840.1| MotA/TolQ/ExbB proton channel [Desulfovibrio sp. ND132]
gi|323458860|gb|EGB14725.1| MotA/TolQ/ExbB proton channel [Desulfovibrio desulfuricans ND132]
Length = 196
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 94/193 (48%), Gaps = 27/193 (13%)
Query: 31 LFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMS 90
L I S+ + +VI+++ V F T R F SGQ+L+T+ ++ + G AA M
Sbjct: 14 LLILSVAALAVILERLVVFTTRR---------FPSGQALDTLLETFRTQ---GRAAA-MD 60
Query: 91 AMSEWKKSCDK---GARSPIGIQDRIDRMMDVAIARELEEI----TEKLSFLGSMSSAGL 143
+ E + SP DR R + AI +E+ +L FL + ++
Sbjct: 61 GVEETAPTFAPFFAACFSP----DRAHR--EAAIQAAGDEVLFGFNARLDFLSTAAATAP 114
Query: 144 LVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISILLGLCVSIPSSIAYNKFIED 202
L+G+LG VLGM+ F +A ++ + GI ++L++ GLC++IP+ +A+ F +
Sbjct: 115 LMGLLGTVLGMINAFSRLASSADVDITVLAGGIWQALLTTAAGLCIAIPAVLAHRWFCRE 174
Query: 203 SKKFAMQMEGFAN 215
K A M+ A
Sbjct: 175 YDKIAHAMQHAAR 187
>gi|126641650|ref|YP_001084634.1| biopolymer transport proteins [Acinetobacter baumannii ATCC 17978]
gi|332851774|ref|ZP_08433699.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Acinetobacter baumannii 6013150]
gi|332865846|ref|ZP_08436630.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Acinetobacter baumannii 6013113]
gi|332874410|ref|ZP_08442313.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Acinetobacter baumannii 6014059]
gi|332729781|gb|EGJ61116.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Acinetobacter baumannii 6013150]
gi|332735058|gb|EGJ66143.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Acinetobacter baumannii 6013113]
gi|332737254|gb|EGJ68178.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Acinetobacter baumannii 6014059]
Length = 202
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 94/195 (48%), Gaps = 18/195 (9%)
Query: 35 SILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSE 94
SI +W +II K + ++RQ +E E+ FW SL+ + L+ A F++
Sbjct: 2 SIGTWYIIISKLLQQGKVKRQGKEAEKHFWEATSLDNAAEGLEQSS----AYRFIA---- 53
Query: 95 WKKSCDKGARSPIGIQDRID--RMMDVAIARELEEITEK----LSFLGSMSSAGLLVGIL 148
+K + + +RID + ++I R +E++ L+FL ++ S VG+
Sbjct: 54 -EKGINSTKSHGGSLLERIDFNTWVSISIQRAIEKVQNHLGGGLAFLATVGSTAPFVGLF 112
Query: 149 GAVLGMMGFFQS--IAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKF 206
G V G+ + I+G S + V+ P + E+LI +GL V++P+ + YN +K
Sbjct: 113 GTVWGIYHALTAIGISGQASIDKVAGP-VGEALIMTAIGLAVAVPAVLGYNWLTRRNKAV 171
Query: 207 AMQMEGFANEFSAIL 221
+ F ++ A+L
Sbjct: 172 MENVRSFGSDLHAVL 186
>gi|294649529|ref|ZP_06726950.1| MotA/TolQ/ExbB family proton channel [Acinetobacter haemolyticus
ATCC 19194]
gi|292824590|gb|EFF83372.1| MotA/TolQ/ExbB family proton channel [Acinetobacter haemolyticus
ATCC 19194]
Length = 291
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 104/232 (44%), Gaps = 33/232 (14%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YGL AL+ + + K + +L + SI +W +I K ++R E E+
Sbjct: 66 NPYGLE-------ALWREGDVIAKTTLFILVLMSIGTWYIIFSKVFQQSKVKRHGIEAER 118
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIG----IQDRID--R 115
FW +L + SL + S ++ +KG S + +RID
Sbjct: 119 NFWEADTLNSAKDSL-------------APNSSYRYIAEKGIHSTKHHDGTLLERIDFNT 165
Query: 116 MMDVAIARELEEITEK----LSFLGSMSSAGLLVGILGAVLGMMGFFQS--IAGYYSNNV 169
+ ++I R +E++ L+FL ++ S VG+ G V G+ + I+G S +
Sbjct: 166 WVTISIQRAIEKVQSHLGNGLAFLATVGSTAPFVGLFGTVWGIYHALTAIGISGQASIDK 225
Query: 170 VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
V+ P + E+LI +GL V++P+ + YN +K + F ++ A+L
Sbjct: 226 VAGP-VGEALIMTAIGLAVAVPAVLGYNWLTRRNKAVMDNVRSFGSDLHAVL 276
>gi|206603060|gb|EDZ39540.1| TolQ [Leptospirillum sp. Group II '5-way CG']
Length = 236
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 108/241 (44%), Gaps = 29/241 (12%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
M+IS L Q+ + ++ +L I S SW +I+ K + F + R+ + F +F
Sbjct: 1 MNIS--DLLFQISPLAETVLFILLILSATSWGIIVLKLITFFRVDRENKAFLSIFEKNDL 58
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIG----------IQDRIDRMMD 118
+ + + LA +F + + KK + ++ P IQ +++
Sbjct: 59 FSIIYEKSLDFQESPLAQMFKAVYEKIKKMPE--SKDPSNENSHYAELEIIQKALNKSRK 116
Query: 119 VAIAREL---------EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
+ I + +++ KL L + + +G+ G V G++ F I+ S ++
Sbjct: 117 MEIVQNTLVQSQNLATSQMSVKLPILATTAGVSPFIGLFGTVWGIVHSFMGISHQSSASI 176
Query: 170 VSI-PGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFS-AILSRQTEG 227
++ PGI E+LI+ +GL +IP+ + YN F++ + M +N FS I + EG
Sbjct: 177 AAVAPGIAEALITTAVGLFTAIPAVVGYNYFVQKIR----SMNSLSNHFSMEIRNYLLEG 232
Query: 228 N 228
N
Sbjct: 233 N 233
>gi|238024465|ref|YP_002908697.1| MotA/TolQ/ExbB proton channel [Burkholderia glumae BGR1]
gi|238025671|ref|YP_002909903.1| MotA/TolQ/ExbB proton channel [Burkholderia glumae BGR1]
gi|237879130|gb|ACR31462.1| MotA/TolQ/ExbB proton channel [Burkholderia glumae BGR1]
gi|237880336|gb|ACR32667.1| MotA/TolQ/ExbB proton channel [Burkholderia glumae BGR1]
Length = 244
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 100/221 (45%), Gaps = 12/221 (5%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
M YG+A ++ Q + I L S++SW VI+ K + L + +
Sbjct: 1 MEQYGIA-------NVWQQGDFITRFIFVFLLGMSVVSWFVIVTKGLANRRLETMGKRAQ 53
Query: 61 QLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGA--RSPIGIQDRIDRMMD 118
FWS S + K+L + + A+ ++ ++ GA + + + + R +
Sbjct: 54 TRFWSTPSFDEGIKALGDGADNPYRAMALAGREANEQQAGGGASLQGSLSASEWVARGLR 113
Query: 119 VAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGII 176
A E+ + L+ LGS+ S VG+ G V G+ +I +G S + V+ P +
Sbjct: 114 NAFDDEVARLQNGLAVLGSIGSTAPFVGLFGTVWGIYHALMAIGASGQASLDHVAGP-VG 172
Query: 177 ESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEF 217
ESLI +GL V+IP+ + +N +K+ + ++ F +E
Sbjct: 173 ESLIMTAIGLFVAIPAVLGFNYVNRGNKRVSHRLNRFVHEL 213
>gi|253990989|ref|YP_003042345.1| biopolymer transport exbb protein [Photorhabdus asymbiotica subsp.
asymbiotica ATCC 43949]
gi|253782439|emb|CAQ85603.1| biopolymer transport exbb protein [Photorhabdus asymbiotica]
Length = 386
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 97/195 (49%), Gaps = 10/195 (5%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+SI+ ++ + VK ++ L I S+++W++ K + R+ R+ + +SL
Sbjct: 163 DLSIWGMYQNADVVVKTVMIGLVIASVITWALFFSKGAELLAAGRRLRKEQLALAEVKSL 222
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKK----SCDKGARSPIGIQDRIDRMMDVAIAREL 125
+ + + + ++ + +S + ++ S D + R++R + AI+R +
Sbjct: 223 DQAAEMAEGFSKLSISRMLLSEVQAERQLSSESLDLNSTKERA-SFRLERSV-AAISRHM 280
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILL 184
L+ +G++S VG+ G V G+M F IA + N+ V PGI E+L++ L
Sbjct: 281 GRGNGYLATIGAISP---FVGLFGTVWGIMNSFIGIAHSQTTNLAVVAPGIAEALLATAL 337
Query: 185 GLCVSIPSSIAYNKF 199
GL +IP+ + YN F
Sbjct: 338 GLVAAIPAVVIYNIF 352
>gi|89899921|ref|YP_522392.1| MotA/TolQ/ExbB proton channel [Rhodoferax ferrireducens T118]
gi|89344658|gb|ABD68861.1| MotA/TolQ/ExbB proton channel [Rhodoferax ferrireducens T118]
Length = 286
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 104/222 (46%), Gaps = 14/222 (6%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YGL AL+ K ++ LL I S+ SW ++I K + + RQ + +
Sbjct: 70 NPYGLE-------ALWKTSDAVAKTVLLLLLIMSVGSWYIMIVKVLEQAKMGRQAKAAVK 122
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
FW+ +++ ++L+ + FM+ + +G I + D + + A+
Sbjct: 123 NFWTAGTVQQGAEALEKNSPFR----FMADAATNAIKKHEGLMGHIPLNDWMAMGIQRAV 178
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQS--IAGYYSNNVVSIPGIIESL 179
R L+FL ++ S VG+ G V G+ + I+G S + V+ P + E+L
Sbjct: 179 DRIQSNTQGGLAFLATVGSISPFVGLFGTVWGIYHALTAIGISGQASIDKVAGP-VGEAL 237
Query: 180 ISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+ +GL V++P+ +AYN + +K ++ F+++ A++
Sbjct: 238 LMTAIGLAVAVPAVLAYNWLVRRNKAVMDEVRAFSSDLHAVV 279
>gi|39936341|ref|NP_948617.1| putative enterochelin uptake protein ExbB [Rhodopseudomonas
palustris CGA009]
gi|39650196|emb|CAE28719.1| putative exbB, uptake of enterochelin; tonB-dependent uptake of B
colicins [Rhodopseudomonas palustris CGA009]
Length = 311
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 95/197 (48%), Gaps = 13/197 (6%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S +F+ VK ++ L + S LSW++ + K+V + + + + L
Sbjct: 76 DLSPIGMFIAADWVVKAVMIALLLASFLSWTICVAKAVEVACANARAKRAFLIVDRSRDL 135
Query: 70 ETVCKSLKNHHNIGLAAIFM--SAMSEWKKSCDKGARS-PIGIQDRI-DRM--MDVAIAR 123
+ L G A+FM SA E +S A S G+++R+ R+ ++ R
Sbjct: 136 DEAVHRLSKR---GGPAVFMVRSASEELHRSLPVLAYSGEAGLKERVVSRLARIEAQAGR 192
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISI 182
L T L+ +G++S VG+ G V G+M F I+ ++ N+ V PGI E+L++
Sbjct: 193 RLMRGTGLLATVGAVSP---FVGLFGTVWGIMNAFIGISQSHTTNLAVVAPGIAEALLAT 249
Query: 183 LLGLCVSIPSSIAYNKF 199
GL +IP+ I YN F
Sbjct: 250 AFGLVAAIPAVIIYNVF 266
>gi|238025555|ref|YP_002909787.1| MotA/TolQ/ExbB proton channel [Burkholderia glumae BGR1]
gi|237880220|gb|ACR32552.1| MotA/TolQ/ExbB proton channel [Burkholderia glumae BGR1]
Length = 303
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 103/228 (45%), Gaps = 25/228 (10%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YGL AL+ + ++ LL I S+ SW ++I K + + R+ + +Q
Sbjct: 74 NPYGLG-------ALWKGGDFVARFVLVLLVIMSMGSWYIMITKFLEQVRANRRAKHADQ 126
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDR--MMDV 119
W+ SL K L F++ + + + G + + +DR +D
Sbjct: 127 QLWTAPSLNEGVKLLDEASPF----RFLT-----ETAIEAGEHHQEALLEAVDRNTWIDA 177
Query: 120 AIARELEEITEK----LSFLGSMSSAGLLVGILGAVLGMMGFFQS--IAGYYSNNVVSIP 173
++ R + ++ + L+FL ++ S VG+ G V G+ + IAG S + V+ P
Sbjct: 178 SVERGITNVSNRLQDGLAFLATVGSTAPFVGLFGTVWGIYHALTAIGIAGQASIDKVAGP 237
Query: 174 GIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+ E+LI +GL V++P+ + YN + +K ++ F + ++
Sbjct: 238 -VGEALIMTAIGLAVAVPAVLGYNFLVRRNKTVMERVRNFGAQLHTVV 284
>gi|124266945|ref|YP_001020949.1| biopolymer transport ExbB protein [Methylibium petroleiphilum PM1]
gi|124259720|gb|ABM94714.1| biopolymer transport ExbB protein [Methylibium petroleiphilum PM1]
Length = 307
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 104/228 (45%), Gaps = 26/228 (11%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YGL +L+ K ++ +L + S+ SW +I+ K + L RQ + +
Sbjct: 88 NPYGLE-------SLWRTSDGVAKAVLLILVVMSMGSWYIIVVKFIEQARLNRQAKLAAK 140
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRID--RMMDV 119
FWS S+ +L+ I + + KK G+ + +D + +
Sbjct: 141 SFWSAGSVRQGADTLEQTSPFRF--IAEAGLEATKKHG--------GLFEHVDLNSWVTM 190
Query: 120 AIARELEEITEKL----SFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIP 173
+I R +E + +L +FL ++ S VG+ G V G+ +I AG S + V+ P
Sbjct: 191 SIQRAMERVQSRLQDGLAFLATVGSTAPFVGLFGTVWGIYHALTAIGVAGQASIDKVAGP 250
Query: 174 GIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+ E+LI +GL V++P+ + YN + +K ++ F N+ ++L
Sbjct: 251 -VGEALIMTAIGLAVAVPAVLGYNWLVRRNKGSMEEVRAFGNDLHSVL 297
>gi|330900779|gb|EGH32198.1| biopolymer transport protein ExbB [Pseudomonas syringae pv.
japonica str. M301072PT]
Length = 145
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 74/145 (51%), Gaps = 11/145 (7%)
Query: 24 VKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCK-------SL 76
V ++ L +FS+LSW++++ KS ++ + Q ++F ++FWS L T + +L
Sbjct: 3 VPAVLWALILFSVLSWALLLIKSAQYVRQKSQNKQFTKVFWSAPDLLTAAEHSAQYPGAL 62
Query: 77 KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLG 136
N G+ A+ A+ E ++ + A + I DR++R + I +E + + L
Sbjct: 63 ARIANSGIEAM---AVDESPRTTQQLAHT-INRSDRLERNLRQQIQKERRALESGQAILA 118
Query: 137 SMSSAGLLVGILGAVLGMMGFFQSI 161
S+ S +G+ G V G+M QSI
Sbjct: 119 SIGSTAPFIGLFGTVWGIMEALQSI 143
>gi|297519773|ref|ZP_06938159.1| colicin uptake protein TolQ [Escherichia coli OP50]
Length = 143
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 73/143 (51%), Gaps = 2/143 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
++I LF++ L VK I+ +L FSI SW++IIQ++ R+ FE FWSG L
Sbjct: 1 MNILDLFLKASLLVKLIMLILIGFSIASWAIIIQRTRILNAAAREAEAFEDKFWSGIELS 60
Query: 71 TVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ + + + G IF S E+ + + +P + + R M +++ RELE +
Sbjct: 61 RLYQESQGKRDNLTGSEQIFYSGFKEFVRLHRANSHAPEAVVEGASRAMRISMNRELENL 120
Query: 129 TEKLSFLGSMSSAGLLVGILGAV 151
+ FLG++ S +G+ G V
Sbjct: 121 ETHIPFLGTVGSISPYIGLFGTV 143
>gi|296134543|ref|YP_003641785.1| MotA/TolQ/ExbB proton channel [Thiomonas intermedia K12]
gi|294338478|emb|CAZ86804.1| Biopolymer transport ExbB protein [Thiomonas sp. 3As]
gi|295794665|gb|ADG29455.1| MotA/TolQ/ExbB proton channel [Thiomonas intermedia K12]
Length = 217
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 93/211 (44%), Gaps = 4/211 (1%)
Query: 14 FALFMQMGLAVKCIITL-LFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
A F Q G A+ ++ L L S+ SW VI+ K+ R+ +W S
Sbjct: 4 LAQFWQQGDALSHLVALVLLAMSVASWFVILWKAALLWRATRRVPAGIAAYWGAASPLQA 63
Query: 73 CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKL 132
+ ++ GL+++ S + D R +DR+ R + A+ +
Sbjct: 64 AAATQSADPDGLSSLMAETASRLARP-DTAHRWQ-SHEDRVTRELREALQAAQRRLQAGH 121
Query: 133 SFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCVSIP 191
L S+ S VG+ G V G+ +IA +V + G + E+LI GL V+IP
Sbjct: 122 VLLASVGSTAPFVGLFGTVWGIYHALTAIAASGQISVDKVAGPVGETLIMTAAGLAVAIP 181
Query: 192 SSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
+ +AYN + +++ +EGFA++ +L+
Sbjct: 182 AVLAYNALSKRARRVQGALEGFAHDLQRLLA 212
>gi|227326942|ref|ZP_03830966.1| biopolymer transport protein [Pectobacterium carotovorum subsp.
carotovorum WPP14]
Length = 230
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 90/187 (48%), Gaps = 6/187 (3%)
Query: 16 LFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKS 75
++ VK ++ L + S+++W++ KSV +R+ R + + + + +T+ +
Sbjct: 1 MYQHADAVVKTVMIGLLLASVITWAIFFSKSVEMSGAKRRLR---REYLALEQAKTLDDA 57
Query: 76 LKNHHNIGLAAIFMSAMSEWKKSCDKGARSPI--GIQDRIDRMMDVAIARELEEITEKLS 133
L+ ++ + + + + ARS GI++R ++ +A +
Sbjct: 58 LETADAFKAGSVAQQLLVDAQNELELSARSDDNNGIKERTAFRLERRVAATGRHMGRGNG 117
Query: 134 FLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPS 192
+L ++ + VG+ G V G+M F IA + N+ V PGI E+L++ +GL +IP+
Sbjct: 118 YLATVGAVAPFVGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGIAEALLATAIGLVAAIPA 177
Query: 193 SIAYNKF 199
+ YN F
Sbjct: 178 VVIYNVF 184
>gi|226953479|ref|ZP_03823943.1| transporter; MotA/TolQ/ExbB proton channel [Acinetobacter sp. ATCC
27244]
gi|226835764|gb|EEH68147.1| transporter; MotA/TolQ/ExbB proton channel [Acinetobacter sp. ATCC
27244]
Length = 291
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 104/232 (44%), Gaps = 33/232 (14%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YGL AL+ + + K + +L + SI +W +I K ++R E E+
Sbjct: 66 NPYGLE-------ALWREGDVIAKTTLFILVLMSIGTWYIIFSKVFQQSKVKRHGIEAER 118
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIG----IQDRID--R 115
FW +L + SL + S ++ +KG S + +RID
Sbjct: 119 NFWEADTLNSAKDSL-------------APNSSYRYIAEKGIHSTKHHDGTLLERIDFNT 165
Query: 116 MMDVAIARELEEITEK----LSFLGSMSSAGLLVGILGAVLGMMGFFQS--IAGYYSNNV 169
+ ++I R +E++ L+FL ++ S VG+ G V G+ + I+G S +
Sbjct: 166 WVTISIQRAIEKVQSHLGNGLAFLATVGSTAPFVGLFGTVWGIYHALTAIGISGQASIDK 225
Query: 170 VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
V+ P + E+LI +GL V++P+ + YN +K + F ++ A+L
Sbjct: 226 VAGP-VGEALIMTAIGLAVAVPAVLGYNWLTRRNKAVMDNVRSFGSDLHAVL 276
>gi|39934314|ref|NP_946590.1| putative biopolymer transport protein ExbB [Rhodopseudomonas
palustris CGA009]
gi|39648162|emb|CAE26682.1| putative biopolymer transport protein ExbB [Rhodopseudomonas
palustris CGA009]
Length = 328
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 99/198 (50%), Gaps = 15/198 (7%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S + +F + VK ++ L + S+ +W+V + K++ + R+ + +L
Sbjct: 106 DLSAWGMFKNADIVVKVVMAGLALASLATWTVWLSKTIELRRETARARDGLSKLETDTTL 165
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSE-----WKKSCDKGARSPIGIQDRIDRMMDVAIARE 124
+ + + H+ ++ + +A E W D R + R++R+ + A+AR+
Sbjct: 166 AELGRGSEGAHD-AVSQLIQTAAREGSLSGWTFDADFKER----VALRLERV-EAAMARK 219
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISIL 183
+ T L+ +G+++ VG+ G V G+M F I+ ++ N+ V PGI E+L++
Sbjct: 220 IASGTGILATVGAVAP---FVGLFGTVWGIMNAFIGISEAHTTNLAVVAPGIAEALLATA 276
Query: 184 LGLCVSIPSSIAYNKFIE 201
LGL ++P+ + YN +
Sbjct: 277 LGLVAAVPAVVIYNYLVR 294
>gi|85058259|ref|YP_453961.1| biopolymer transport protein ExbB [Sodalis glossinidius str.
'morsitans']
gi|84778779|dbj|BAE73556.1| biopolymer transport protein [Sodalis glossinidius str.
'morsitans']
Length = 253
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 96/194 (49%), Gaps = 6/194 (3%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
MD+S++ ++ + VK ++ L + S+++W++ K + ++R+ R L +S
Sbjct: 17 MDLSVWGMYQHADVVVKIVMIGLLLASVVTWALFFGKGAELLAVKRRLRRELLLLKDVRS 76
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGAR--SPIGIQDRIDRMMDVAIARELE 126
L+ N L+ +S ++E D AR GI++R+ ++ +A
Sbjct: 77 LDQATTVAANFSPRSLS---VSLLAETANELDLSARLSDNNGIKERVAFRLERRVAGVSR 133
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLG 185
+ + FL ++ + +G+ G V G+M F IA + N+ V PGI E+L++ +G
Sbjct: 134 AMGKGNGFLATIGAISPFIGLFGTVWGIMNSFIGIAHTQTTNLAVVAPGIAEALLATAIG 193
Query: 186 LCVSIPSSIAYNKF 199
L +IP+ + YN F
Sbjct: 194 LFAAIPAVVIYNVF 207
>gi|240851192|ref|YP_002972595.1| biopolymer transport protein ExbB [Bartonella grahamii as4aup]
gi|240268315|gb|ACS51903.1| biopolymer transport protein ExbB [Bartonella grahamii as4aup]
Length = 294
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 112/266 (42%), Gaps = 49/266 (18%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D S F++FM VK +I +L + S++SW++ K + +R+ R QL + Q+L
Sbjct: 19 DFSPFSMFMAADWVVKAVIIILLLASLMSWTIAFVKIIEITLAKRRVRHELQLVLNAQTL 78
Query: 70 ETVCKSLKNHHNIG-------LAAIFMSAMSEW--------KKSCDK-GAR-SPIGIQD- 111
+ SLK G L +++S K S ++ GAR S I+D
Sbjct: 79 TRLAASLKESKGAGVFFLKEVLKEVYLSTQQVHFSAPEGINKSSGERTGARESAQTIEDI 138
Query: 112 ----------RIDRMMDVAIARELEE-ITEKL-------------------SFLGSMSSA 141
+ R + AR++ E + E++ + L ++ +
Sbjct: 139 LFYEESNQYEDVSRDVRDVRARDVHEGLKERVHSLLSRCLLAATRRVACGSTVLATIGAI 198
Query: 142 GLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFI 200
VG+ V G+M F IA + + V PGI E+L + +GL V+IP+ + YN +
Sbjct: 199 APFVGLFATVWGIMNSFIGIAQSQTTRLDVVAPGIAEALFATAIGLFVAIPAVVMYNSLM 258
Query: 201 EDSKKFAMQMEGFANEFSAILSRQTE 226
+ + A +LSR+ +
Sbjct: 259 RALNGYRNDLGDIAAALERLLSRELD 284
>gi|268592103|ref|ZP_06126324.1| ferric siderophore transport system protein ExbB [Providencia
rettgeri DSM 1131]
gi|291312499|gb|EFE52952.1| ferric siderophore transport system protein ExbB [Providencia
rettgeri DSM 1131]
Length = 314
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 102/217 (47%), Gaps = 4/217 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S++ ++ VK ++ L I S+++W++ K + + RR+ + + +SL
Sbjct: 91 DLSVWGMYQNADNVVKTVMIGLVIASVITWALFFSKGLEILVARRRLKAEAKAIAEVKSL 150
Query: 70 ETVCKSLKNHHNIGLAAIFMS-AMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ + + + ++ A++E S + S G ++R ++ A+A +
Sbjct: 151 DEAVSIAEGFKANSITRMLLNEAVTERALSANSSDLS--GTKERTSFRLERAVAAISRYM 208
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
+L ++ + VG+ G V G+M F IA + N+ V PGI E+L++ +GL
Sbjct: 209 GRGNGYLATIGAISPFVGLFGTVWGIMNSFIGIAHSQTTNLAVVAPGIAEALLATAIGLI 268
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+IP+ + YN F + Q+ A + + +L R
Sbjct: 269 AAIPAVVIYNIFARMINNYRGQVGDVAAQSALLLGRD 305
>gi|264679183|ref|YP_003279090.1| MotA/TolQ/ExbB proton channel [Comamonas testosteroni CNB-2]
gi|299533538|ref|ZP_07046914.1| MotA/TolQ/ExbB proton channel [Comamonas testosteroni S44]
gi|262209696|gb|ACY33794.1| MotA/TolQ/ExbB proton channel [Comamonas testosteroni CNB-2]
gi|298718444|gb|EFI59425.1| MotA/TolQ/ExbB proton channel [Comamonas testosteroni S44]
Length = 240
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 96/215 (44%), Gaps = 14/215 (6%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
I ++ Q K + +L + S+ SW VII K+++ + ++ F Q FW L T
Sbjct: 7 IAHVWTQGDFVTKGVAIILLVMSVASWLVIILKALDIVKFKK-FATQAQDFWHSPDLATG 65
Query: 73 CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRID------RMMDVAIARELE 126
+ L + F + E +++ ++ + + D +D R + I
Sbjct: 66 LEKLGDDKQ----NPFRFMVLEGREASAHHRKTSVHLHDTLDISDWVTRCLRNGINEFTA 121
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILL 184
+ L+ L S+ S +G+ G V G+ +I +G S + V+ P I E+LI L
Sbjct: 122 RLQSGLAILASVGSTAPFIGLFGTVWGIYHALVAIGMSGQSSIDKVAGP-IGEALIMTAL 180
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
GL V+IP+ + YN + +K + FA++ A
Sbjct: 181 GLAVAIPAVLGYNALVRGNKGILNALNSFAHDVHA 215
>gi|194719509|gb|ACF93793.1| ExbB [Collimonas fungivorans Ter331]
Length = 306
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 106/228 (46%), Gaps = 25/228 (10%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YGL AL+ + + +L + S+ SW +II K + + L Q + ++
Sbjct: 75 NPYGLD-------ALWKGGDFVARGTLIILVLMSMGSWYIIITKLIEQVKLMGQAKNAQK 127
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRID--RMMDV 119
FW S+E LK + A F++ GA + ++ID + +
Sbjct: 128 TFWKAASVEAGVSGLKPNS----AYRFIAQNGVNSTQHHDGA-----LLEQIDLNTWVTM 178
Query: 120 AIARELEEITEK----LSFLGSMSSAGLLVGILGAVLGMMGFFQS--IAGYYSNNVVSIP 173
+I R +E++ + L+FL ++ S VG+ G V G+ + IAG S + V+ P
Sbjct: 179 SIQRSVEKVQSRLQDGLAFLATVGSTAPFVGLFGTVWGIYHALTAIGIAGQASIDKVAGP 238
Query: 174 GIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+ E+LI +GL V++P+ + YN + +K ++ F+ + ++L
Sbjct: 239 -VGEALIMTAIGLAVAVPAVLGYNWLVRRNKSAMEEIRSFSADLHSVL 285
>gi|299770411|ref|YP_003732437.1| biopolymer transport protein ExbB [Acinetobacter sp. DR1]
gi|298700499|gb|ADI91064.1| biopolymer transport protein ExbB [Acinetobacter sp. DR1]
Length = 211
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 108/197 (54%), Gaps = 21/197 (10%)
Query: 31 LFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS---LETVCKSLKNHHNIGLAAI 87
L + SIL+ ++ I++ F+ LRR E L SG+S E + +SL+ + + +A+
Sbjct: 15 LILCSILTVAISIER---FVRLRRSQVLPEAL--SGKSSLRAEDIVESLEQNVEVQNSAL 69
Query: 88 --FMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLV 145
+ A E ++ ++ AR+ M+VA ++E+ + + ++FLG++S+ L+
Sbjct: 70 GHILKAGFEHREHGEQFARA----------QMEVAASQEISYLEKNINFLGTLSAVAPLL 119
Query: 146 GILGAVLGMMGFFQSIA-GYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSK 204
G+LG V+G++ F I G + + IPGI ++LI+ +G+ ++IP+ IAY F +
Sbjct: 120 GLLGTVVGIIESFLVIDFGSAGSPSLMIPGISKALITTAVGMLIAIPALIAYRYFQRVVQ 179
Query: 205 KFAMQMEGFANEFSAIL 221
+ ++E + F A L
Sbjct: 180 DYIAELEQQSTLFHASL 196
>gi|78066476|ref|YP_369245.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. 383]
gi|77967221|gb|ABB08601.1| outer membrane transport energization protein ExbB [Burkholderia
sp. 383]
Length = 304
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 101/228 (44%), Gaps = 25/228 (10%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YGL AL+ + ++ LL I S+ SW ++I K + + R+ + +
Sbjct: 73 NPYGLG-------ALWKNGDFVARFVLILLVIMSMGSWYIMITKFLEQLRANRRAKLADA 125
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDR--MMDV 119
W+ SL + L A + + + G + + +DR +DV
Sbjct: 126 QLWTAPSLAEGARLLDEASPFRFIA---------ETAIEAGEHHEDALLEAVDRNTWIDV 176
Query: 120 AIARELEEITEK----LSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIP 173
++ R + ++ + L+FL ++ S VG+ G V G+ +I AG S + V+ P
Sbjct: 177 SVERSITNVSNRMQDGLAFLATVGSTAPFVGLFGTVWGIYHALTAIGIAGQASIDKVAGP 236
Query: 174 GIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+ E+LI +GL V++P+ + YN + +K ++ F + +L
Sbjct: 237 -VGEALIMTAIGLAVAVPAVLGYNFLVRRNKSVMERVRNFGAQLHTVL 283
>gi|332527210|ref|ZP_08403280.1| biopolymer transport ExbB protein [Rubrivivax benzoatilyticus JA2]
gi|332111632|gb|EGJ11613.1| biopolymer transport ExbB protein [Rubrivivax benzoatilyticus JA2]
Length = 265
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 101/228 (44%), Gaps = 25/228 (10%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YGL AL+MQ K + +L I S+ SW +I K ++ + RE +
Sbjct: 50 NPYGLQ-------ALWMQGDFVAKGTLIILVIMSMGSWYIIFTKLYEQRSMMKSARESAE 102
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
FW S++ +L+ + F K+ D + + + ID+ V +
Sbjct: 103 AFWKANSVKAGVTALEE------GSAFRYIAESGIKASDHHEGTMV---ESIDKHTWVTM 153
Query: 122 ARELE------EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQ--SIAGYYSNNVVSIP 173
+ E +T+ L+FL ++ S VG+ G V G+ I+G S + V+ P
Sbjct: 154 SVERAVGNIQGRLTDGLAFLATVGSTAPFVGLFGTVWGIYNALVRIGISGQASIDKVAGP 213
Query: 174 GIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+ E+LI +GL V++P+ + YN I +K Q+ F+ + +L
Sbjct: 214 -VGEALIMTAIGLAVAVPAVMGYNWLIRRNKAVLDQVRSFSADLHNVL 260
>gi|330945602|gb|EGH47102.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. pisi str.
1704B]
Length = 219
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 90/201 (44%), Gaps = 4/201 (1%)
Query: 25 KCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGL 84
K ++ L I SI++W++ I K + +R+ R +SL + +
Sbjct: 1 KAVMIGLAIASIITWTIWISKGFELLGAKRRLRGEIANLKKARSLSEASATASTEGTLA- 59
Query: 85 AAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLL 144
+ A+ E + S + R GI++R+ ++ +A ++ L ++ S
Sbjct: 60 HLLVHDALEEMRLSANSRERE--GIKERVSFRLERLVAACGRNMSMGTGVLATIGSTAPF 117
Query: 145 VGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDS 203
VG+ G V G+M F IA + N+ V PGI E+L++ LGL +IP+ + YN F
Sbjct: 118 VGLFGTVWGIMNSFIGIAKTQTTNLAVVAPGIAEALLATALGLVAAIPAVVIYNVFARSI 177
Query: 204 KKFAMQMEGFANEFSAILSRQ 224
+ Q+ + ++SR
Sbjct: 178 AGYKAQVSDASAHVLLLVSRD 198
>gi|145589325|ref|YP_001155922.1| MotA/TolQ/ExbB proton channel [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
gi|145047731|gb|ABP34358.1| outer membrane transport energization protein ExbB
[Polynucleobacter necessarius subsp. asymbioticus
QLW-P1DMWA-1]
Length = 230
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 86/195 (44%), Gaps = 7/195 (3%)
Query: 31 LFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNH-----HNIGLA 85
L I SI++W +++ + LR+ E EQ FW S E S NH + I +
Sbjct: 25 LLICSIVTWVILLTRFWELRNLRKLKPELEQ-FWRATSYEQGLASFSNHAANPYYQIAKS 83
Query: 86 AIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLV 145
A S + + S + + + + R + I + + L+FLGS + +
Sbjct: 84 AATASTHHQSQSSNRRELLQTLNYSEWMARSIKNGIDSIAASLQKGLTFLGSTGAVAPFI 143
Query: 146 GILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCVSIPSSIAYNKFIEDSK 204
G+ G V G+ +I+ S + + G I E+LI LGL V+IP+ + +N +K
Sbjct: 144 GLFGTVWGIYHALIAISSSGSAQLDQVAGPIGEALIMTALGLAVAIPAVLGFNALNRGNK 203
Query: 205 KFAMQMEGFANEFSA 219
++ F N+ A
Sbjct: 204 LLVAELNRFGNDLLA 218
>gi|167841809|ref|ZP_02468493.1| MotA/TolQ/ExbB proton channel [Burkholderia thailandensis MSMB43]
Length = 299
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 100/228 (43%), Gaps = 25/228 (10%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YGL AL+ + ++ LL I S+ SW +++ K + + R+ + +
Sbjct: 70 NPYGLG-------ALWKNGDFVARFVLILLVIMSMGSWYIMVTKFLEQLRANRRAKLADA 122
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDR--MMDV 119
WS SL K L A SE + + +DR +DV
Sbjct: 123 QLWSAPSLAEGAKLLDEASPFRFIAETAIEASEHHDEA---------LLEAVDRNTWIDV 173
Query: 120 AIARELEEITEK----LSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIP 173
++ R + ++ + L+FL ++ S VG+ G V G+ +I AG S + V+ P
Sbjct: 174 SVERSITNVSNRMQDGLAFLATVGSTAPFVGLFGTVWGIHHALTAIGIAGQASIDKVAGP 233
Query: 174 GIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+ E+LI+ +GL V++P+ + YN + +K ++ F + +L
Sbjct: 234 -VGEALITTAIGLAVAVPAVLGYNFLVRRNKSMMERVRNFGAQLHTVL 280
>gi|37527796|ref|NP_931141.1| biopolymer transport protein ExbB [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|36787232|emb|CAE16313.1| Biopolymer transport protein ExbB [Photorhabdus luminescens subsp.
laumondii TTO1]
Length = 344
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 98/198 (49%), Gaps = 16/198 (8%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+SI+ ++ + VK ++ L I S+++W++ K + R+ R+ +SL
Sbjct: 121 DLSIWGMYQNADIVVKTVMIGLVIASVITWALFFSKGTELLASGRRLRKERLALTDVKSL 180
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKK----SCDKGA---RSPIGIQDRIDRMMDVAIA 122
+ + + + ++ + +S + ++ S D + R+ R++R + AI+
Sbjct: 181 DQAAEIAEGFNKHSISRLLLSEVQAERQLSSESTDLNSTKERAAF----RLERSV-AAIS 235
Query: 123 RELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLIS 181
R + L+ +G++S VG+ G V G+M F IA + N+ V PGI E+L++
Sbjct: 236 RHMGRGNGYLATIGAISP---FVGLFGTVWGIMNSFIGIAHSQTTNLAVVAPGIAEALLA 292
Query: 182 ILLGLCVSIPSSIAYNKF 199
LGL +IP+ + YN F
Sbjct: 293 TALGLVAAIPAVVIYNIF 310
>gi|221066179|ref|ZP_03542284.1| MotA/TolQ/ExbB proton channel [Comamonas testosteroni KF-1]
gi|220711202|gb|EED66570.1| MotA/TolQ/ExbB proton channel [Comamonas testosteroni KF-1]
Length = 240
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 96/215 (44%), Gaps = 14/215 (6%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
I ++ Q K + +L + S+ SW VI+ K+++ + ++ F Q FW L T
Sbjct: 7 IAHVWTQGDFVTKGVAIILLVMSVASWLVIVLKALDIVKFKK-FATQAQDFWHSPDLATG 65
Query: 73 CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRID------RMMDVAIARELE 126
+ L + F + E +++ ++ + + D +D R + I
Sbjct: 66 LEKLGDDKQ----NPFRFMVLEGREASAHHRKTSVHLHDTLDISDWVTRCLRNGINEFTA 121
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILL 184
+ L+ L S+ S +G+ G V G+ +I +G S + V+ P I E+LI L
Sbjct: 122 RLQSGLAILASVGSTAPFIGLFGTVWGIYHALVAIGMSGQSSIDKVAGP-IGEALIMTAL 180
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
GL V+IP+ + YN + +K + FA++ A
Sbjct: 181 GLAVAIPAVLGYNALVRGNKGILNALNSFAHDVHA 215
>gi|319791129|ref|YP_004152769.1| mota/tolq/exbb proton channel [Variovorax paradoxus EPS]
gi|315593592|gb|ADU34658.1| MotA/TolQ/ExbB proton channel [Variovorax paradoxus EPS]
Length = 231
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 88/200 (44%), Gaps = 11/200 (5%)
Query: 25 KCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGL 84
+ + LL SI SW VI+ K+ R FW +L + L+
Sbjct: 15 RSVAALLLAMSIASWVVILWKTWLLRGGTRDVLRSIAAFWQSATLADAEQKLQAFDR--- 71
Query: 85 AAIFMSAMSEWKKSCDKGARSPIGI----QDRIDRMMDVAIARELEEITEKLSFLGSMSS 140
AA+ + A+ K + +G R+ R++ A+ L + L ++ +
Sbjct: 72 AALVLPAVVAIKNAAAVNVNGTLGATADRNQRLTRVLRDALHGALRRLQAGQILLATVGA 131
Query: 141 AGLLVGILGAVLGMMGFFQSIAGY---YSNNVVSIPGIIESLISILLGLCVSIPSSIAYN 197
VG+LG V G+ G IAG ++ + V+ P + E+L+ GL V+IP+ +AYN
Sbjct: 132 TAPFVGLLGTVWGIYGALTGIAGQTGGFTIDKVAGP-VGEALVMTAFGLAVAIPAVLAYN 190
Query: 198 KFIEDSKKFAMQMEGFANEF 217
F + ++EGFA++
Sbjct: 191 VFGRVIGRIEAELEGFAHDL 210
>gi|260177181|gb|ACX33905.1| putative MotA/TolQ/ExbB proton channel [uncultured prokaryote AT3]
Length = 245
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 99/204 (48%), Gaps = 11/204 (5%)
Query: 35 SILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHN------IGLAAIF 88
S+ SW +I+ + V + RR+ F FW+ SL V ++L + AI
Sbjct: 29 SVASWYLIVSRGVANLLARRRADRFLAEFWNADSLAAVSQTLAARQPDNAFAALAHDAIL 88
Query: 89 MSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGIL 148
+A SE + K A + G + + R++ + E + L+ L S SA +G+
Sbjct: 89 TAAESE-RHGLQKLA-AVGGSGEFMTRVLRNGVDMEAARVESGLTVLASAGSAAPYIGLF 146
Query: 149 GAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKF 206
G V G+ +I +G + + V+ P + E+LI LGL V+IP+ +AYN F ++ +
Sbjct: 147 GTVWGIYHALVNIGLSGQGTLDKVAGP-VGEALIMTALGLAVAIPAVLAYNAFARRNRIW 205
Query: 207 AMQMEGFANEFSAILSRQTEGNIS 230
+++ FA++ A+ ++ N S
Sbjct: 206 LARLDAFAHDLYALTMVGSKANSS 229
>gi|332559388|ref|ZP_08413710.1| biopolymer transport protein, ExbB [Rhodobacter sphaeroides WS8N]
gi|332277100|gb|EGJ22415.1| biopolymer transport protein, ExbB [Rhodobacter sphaeroides WS8N]
Length = 219
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 96/207 (46%), Gaps = 7/207 (3%)
Query: 24 VKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIG 83
V+ ++ LL S ++W+V++ K V RR+ + +L+ + L +
Sbjct: 9 VQAVMILLAAASFVTWTVLLFKLVEIAIARRRLARTAATVETSATLDEAVRRLAGRKD-- 66
Query: 84 LAAIFMSAMS-EWKKSCDKGAR--SPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSS 140
A FM+ S E + D G+++R+ +++ A+ E + + L ++ S
Sbjct: 67 -PAAFMARASFEELQRSDAALDLAGTAGLKERVRSILERVEAQAGERLRRGIGLLATIGS 125
Query: 141 AGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKF 199
G VG+ G V G+M F I+ + N+ V PGI E+L++ LGL +IP+ + YN F
Sbjct: 126 VGPFVGLFGTVWGIMNAFIGISQSQTTNLAVVAPGIAEALLATGLGLVAAIPAVVIYNHF 185
Query: 200 IEDSKKFAMQMEGFANEFSAILSRQTE 226
+ + + + +LSR +
Sbjct: 186 VRSIASWRLSLADAGAAIERMLSRDLD 212
>gi|251772670|gb|EES53234.1| MotA/TolQ/ExbB proton channel [Leptospirillum ferrodiazotrophum]
Length = 223
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 92/211 (43%), Gaps = 5/211 (2%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+++F Q+ L + ++ L S LSW VI K + R F + F
Sbjct: 1 MNLFNFINQISLLAEIVLGFLIFLSSLSWGVIFYKWYAISKTNAENRGFIKAFKKADRFS 60
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWK----KSCDKGARSPIGIQDRIDRMMDVAIARELE 126
+ + LA +F SA + K ++ +G + I R + A +L
Sbjct: 61 RLYQDAGEFRRSTLAFMFRSAYEKIKGIEERAVSRGGEVRESEIEIIHRTLLQARQEDLT 120
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLG 185
+ L L + ++ VG+ G V G++ F+ I+ S ++ S+ PGI ++L++ G
Sbjct: 121 RLESYLQILATTANISPFVGLFGTVWGIIHAFRDISHQSSVSIASVAPGIADALVTTASG 180
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANE 216
L +IP+ IAYN F++ + E F E
Sbjct: 181 LFAAIPAVIAYNYFLQRIRSIESLAESFNME 211
>gi|331009381|gb|EGH89437.1| TonB system transport protein ExbB1 [Pseudomonas syringae pv.
tabaci ATCC 11528]
Length = 219
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 90/201 (44%), Gaps = 4/201 (1%)
Query: 25 KCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGL 84
K ++ L I SI++W++ I K + +R+ R +SL + +
Sbjct: 1 KAVMIGLAIASIITWTIWISKGFELLGAKRRLRGEIVNLKKARSLNEASSTASKEGTLA- 59
Query: 85 AAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLL 144
+ A+ E + S + R GI++R+ ++ +A ++ L ++ S
Sbjct: 60 HLLVHDALEEMRLSANSRERE--GIKERVSFRLERLVAACGRNMSMGTGVLATIGSTAPF 117
Query: 145 VGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDS 203
VG+ G V G+M F IA + N+ V PGI E+L++ LGL +IP+ + YN F
Sbjct: 118 VGLFGTVWGIMNSFIGIAKTQTTNLAVVAPGIAEALLATALGLVAAIPAVVIYNVFARSI 177
Query: 204 KKFAMQMEGFANEFSAILSRQ 224
+ Q+ + ++SR
Sbjct: 178 AGYKAQVSDASAHVLLLVSRD 198
>gi|296535156|ref|ZP_06897383.1| TolQ protein [Roseomonas cervicalis ATCC 49957]
gi|296264519|gb|EFH10917.1| TolQ protein [Roseomonas cervicalis ATCC 49957]
Length = 171
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 72/147 (48%), Gaps = 7/147 (4%)
Query: 83 GLAA-IFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSA 141
G+AA + + EW+ ++G S + R++ M + EL + L FL + +
Sbjct: 13 GVAARVLRAGTREWRDGREQG-ESRFEYRHRMEHAMRHVLTIELRRVEPGLPFLATTGAV 71
Query: 142 GLLVGILGAVLGMMGFFQSIAGYYSNNV---VSIPGIIESLISILLGLCVSIPSSIAYNK 198
+G+ G V G+M F IA SN+ V PGI E+L + +GL +IP+ +AYN+
Sbjct: 72 APFIGLFGTVWGIMNSFAGIA--QSNDTSLAVVAPGIAEALFATAIGLIAAIPAVMAYNR 129
Query: 199 FIEDSKKFAMQMEGFANEFSAILSRQT 225
+ + + A E +A LSR+
Sbjct: 130 LLVRLGRLRQDGQAAATELAAGLSRRP 156
>gi|330819371|ref|YP_004348233.1| MotA/TolQ/ExbB proton channel [Burkholderia gladioli BSR3]
gi|327371366|gb|AEA62721.1| MotA/TolQ/ExbB proton channel [Burkholderia gladioli BSR3]
Length = 244
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 99/220 (45%), Gaps = 12/220 (5%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
M YG+A ++ Q + I L S++SW VI+ K + L + +
Sbjct: 1 MEQYGIA-------NVWQQGDFITRFIFVFLLGMSVVSWFVILTKGLANRRLETMGKRAQ 53
Query: 61 QLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGA--RSPIGIQDRIDRMMD 118
FWS S + K+L + A+ ++ ++ GA + + + + R +
Sbjct: 54 TRFWSTPSFDEGIKALGEGADNPYRAMALAGREANEQQAGGGASLQGSLSASEWVARGLR 113
Query: 119 VAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGII 176
A E+ + L+ LGS+ S VG+ G V G+ +I +G S + V+ P +
Sbjct: 114 NAFDDEVARLQNGLAVLGSIGSTAPFVGLFGTVWGIYHALMAIGASGQASLDHVAGP-VG 172
Query: 177 ESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANE 216
ESLI +GL V+IP+ + +N +K+ + ++ F +E
Sbjct: 173 ESLIMTAIGLFVAIPAVLGFNYVNRGNKRVSHRLNRFVHE 212
>gi|192362375|ref|YP_001981791.1| ExbB [Cellvibrio japonicus Ueda107]
gi|190688540|gb|ACE86218.1| ExbB [Cellvibrio japonicus Ueda107]
Length = 239
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 96/224 (42%), Gaps = 21/224 (9%)
Query: 4 YGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLF 63
YGLA +L+ Q L +K + +L I SI SW VI+ ++ LR+ + F
Sbjct: 5 YGLA-------SLWAQGDLLIKGVAIMLLIMSIASWWVIVVRAWGLWRLRKSSQGLND-F 56
Query: 64 WSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGA------RSPIGIQDRIDRMM 117
W QS ++L + + F E + + D + + D + +
Sbjct: 57 WHAQSFAEGLRTLGEDRH----SPFRHLAEEGQAALDHHTNHKTDLHGHLPLADWLTACL 112
Query: 118 DVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGI 175
+I E + L+ L S+ S +G+ G V G+ I +G S + V+ P +
Sbjct: 113 RGSIDESAERLQRGLAILASVGSTSPFIGLFGTVWGIYHALVGIGVSGQASIDKVAGP-V 171
Query: 176 IESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
E+LI GL V+IP+ + YN +K ++ FA++ A
Sbjct: 172 GEALIMTAFGLAVAIPAVLGYNALTRANKGVLNKLHRFAHQLHA 215
>gi|189346275|ref|YP_001942804.1| protein TolQ [Chlorobium limicola DSM 245]
gi|189340422|gb|ACD89825.1| protein TolQ [Chlorobium limicola DSM 245]
Length = 225
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 108/220 (49%), Gaps = 5/220 (2%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
+F+L G V ++ LL FS++SW++I K + R + EF F+ +L+ V
Sbjct: 8 LFSLVSDAGPVVLLVLALLVGFSVISWTIIAYKFTSVRKSRHESSEFLDCFFEVSNLDRV 67
Query: 73 CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKL 132
+ + N LA +F S E++ ++RI R + + E + ++ +
Sbjct: 68 FAESEKYRNGSLARVFRSGYLEYRAPGKPEENR--NKEERIKRAIKREVNAETKRLSHLV 125
Query: 133 SFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCVSIP 191
FL ++ + +G+ G V G+M F +I S ++ ++ PGI E+L++ GL +IP
Sbjct: 126 PFLATVGNTAPFIGLFGTVWGIMNAFHNIGLTQSASLAAVAPGISEALVATAAGLAAAIP 185
Query: 192 SSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE--GNI 229
+ + YN + ++ F+++F+A +T+ GN+
Sbjct: 186 AVMGYNYLTQQIGGIERDLDDFSSDFAAACLEKTDKAGNV 225
>gi|332283507|ref|YP_004415418.1| transport protein ExbB2 [Pusillimonas sp. T7-7]
gi|330427460|gb|AEC18794.1| transport protein ExbB2 [Pusillimonas sp. T7-7]
Length = 654
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 104/214 (48%), Gaps = 16/214 (7%)
Query: 16 LFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS-GQSLE---- 70
LF + L I+ +L + SW ++ +KS N L + F + F GQ LE
Sbjct: 402 LFSAVPLDAWIILAVLAFMMVQSWIIMARKSRNAARLNQANGRFREAFSKVGQRLELLAD 461
Query: 71 --TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSP---IGIQDRIDRMMDVAIAREL 125
+ SLK+ L ++ A++E + +G + + + I MD RE
Sbjct: 462 DKNLASSLKDSS---LWRLYQVAINEIRTRRAQGVDTSMVSVATIESIRASMDAVRTREN 518
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFF--QSIAGYYSNNVVSIPGIIESLISIL 183
+++ KL L + + G +G+LG VLG+M F ++AG + N ++ PG+ +L++
Sbjct: 519 QQLGAKLGILSNAIAGGPYIGLLGTVLGIMVVFLGTAMAGDVNINAIA-PGMAAALLATA 577
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEF 217
GL V+IP+ YN+ I +K+ + M F +EF
Sbjct: 578 AGLFVAIPALFGYNRIISRNKEISADMRVFVDEF 611
>gi|152981657|ref|YP_001354583.1| MotA/TolQ/ExbB proton channel family protein [Janthinobacterium sp.
Marseille]
gi|151281734|gb|ABR90144.1| MotA/TolQ/ExbB proton channel family protein [Janthinobacterium sp.
Marseille]
Length = 230
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 100/215 (46%), Gaps = 9/215 (4%)
Query: 14 FALFMQMGLAV-KCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
A + G AV + +L I SILSW I+ K+ + +R+ + FW +L
Sbjct: 12 LAHYWAQGDAVSHSVAYVLLIMSILSWYYILSKAWSSWRIRKSAAALDG-FWQAPTLTDA 70
Query: 73 CKSLK--NHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+++ + N+ LAA + A + + A + G + I R + I R +
Sbjct: 71 IATIRRSDSENVYTPLAAQSVEAANIKPHANSLNANTDPG--ELITRTLRQEINRVSSRL 128
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLC 187
L+ L S+ S +G+ G V G+ +++ + + + G + E+LI LGL
Sbjct: 129 ETGLTLLASVGSTAPFIGLFGTVWGIYHALVAVSSSGTIQIDKVAGPVGEALIMTALGLA 188
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
V+IP+ +AYN F ++ +++ FA++ A L+
Sbjct: 189 VAIPAVLAYNAFTRVNRVTLAELDAFAHDLHAYLT 223
>gi|296284897|ref|ZP_06862895.1| biopolymer transport ExbB protein [Citromicrobium bathyomarinum
JL354]
Length = 248
Score = 62.0 bits (149), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 98/215 (45%), Gaps = 25/215 (11%)
Query: 19 QMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKN 78
Q G I+ +L I S+ S+ ++I K + + Q+++ FW SLE L
Sbjct: 26 QGGPIAWTILAVLVIMSVGSFYILITKLLEQNKVLGQYKKVRSQFWRANSLEEGAGKLDK 85
Query: 79 HHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRM-----MDVAIARELEEITEKL- 132
+ S W++ D + D M M ++AR + I +L
Sbjct: 86 N-------------SAWRQMVDDTVAAQASHGKMTDSMEAHDWMHGSLARSQDAIMSRLN 132
Query: 133 ---SFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGLC 187
+FL ++ + VG+LG V+G+ +I AG S + V+ P + E+LI +GL
Sbjct: 133 GGLAFLATVGATAPFVGLLGTVIGIYRALINIGLAGSASIDKVAGP-VGEALIMTAIGLL 191
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
V++P+ AYN + +K+ A + GF+ + A ++
Sbjct: 192 VAVPAVFAYNWLMSRNKRIAELLTGFSTDLLAYVN 226
>gi|258591850|emb|CBE68153.1| MotA/TolQ/ExbB proton channel precursor [NC10 bacterium 'Dutch
sediment']
Length = 225
Score = 62.0 bits (149), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 105/235 (44%), Gaps = 50/235 (21%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
+M IF + Q G+ + +L IFSI S +VI ++ F + + Q
Sbjct: 1 MMGQGIFQVMAQGGI----TMVVLAIFSIFSLAVIGER-------------FYTFYKAQQ 43
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIG---------IQDRIDRMMD 118
+ V + GL + M+E + C++ SP+ I DR D +
Sbjct: 44 ATGRVAEK-------GLQYVADGKMAEALRLCEQNDGSPVAKVLQAGLLAIIDRGDPTLS 96
Query: 119 -VAIARELE------------EITEKLSFLGSMSSAG---LLVGILGAVLGMMGFFQSIA 162
R LE EI+ +LGS+++ G VG+ G VLG++ F++IA
Sbjct: 97 GKQFPRRLESCKGAMQRTTSAEISRLERYLGSLATLGNVSPFVGLFGTVLGIIRAFEAIA 156
Query: 163 GYYSNNVVSI-PGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANE 216
S + ++ GI E+L++ GL V+IP+ IAYN F+ K F M+ A+E
Sbjct: 157 KVGSGGIGTVSAGIAEALVATAAGLFVAIPAVIAYNYFVGRVKLFTAAMDSAASE 211
>gi|78060438|ref|YP_367013.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. 383]
gi|77964988|gb|ABB06369.1| outer membrane transport energization protein ExbB [Burkholderia
sp. 383]
Length = 311
Score = 62.0 bits (149), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 100/228 (43%), Gaps = 25/228 (10%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YGL AL+ + ++ LL + S+ SW V++ K + + + ++
Sbjct: 75 NPYGLG-------ALWANGDFVARFVLALLVVMSLGSWYVMVTKFIEQARANSRAKSADE 127
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDR--MMDV 119
W+ +L L + A + + + G + D +DR +++
Sbjct: 128 QVWNAPTLAEGTAQLDDASPFRFIA---------ENAIEAGEHHDSALLDSVDRNTWIEL 178
Query: 120 AIARELEEITEKL----SFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIP 173
I R + ++ +L +FLG++ S VG+ G V G+ +I AG S + V+ P
Sbjct: 179 NIERSITNVSNRLQDGLAFLGTVGSTAPFVGLFGTVWGIYHALTAIGIAGQASIDKVAGP 238
Query: 174 GIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+ E+LI +GL V++P+ + YN + +K ++ F + +L
Sbjct: 239 -VGEALIMTAIGLAVAVPAVLGYNFLVRRNKSVMERVRNFGAQLHTVL 285
>gi|121594748|ref|YP_986644.1| MotA/TolQ/ExbB proton channel [Acidovorax sp. JS42]
gi|222110639|ref|YP_002552903.1| mota/tolq/exbb proton channel [Acidovorax ebreus TPSY]
gi|120606828|gb|ABM42568.1| outer membrane transport energization protein ExbB [Acidovorax sp.
JS42]
gi|221730083|gb|ACM32903.1| MotA/TolQ/ExbB proton channel [Acidovorax ebreus TPSY]
Length = 238
Score = 62.0 bits (149), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/207 (20%), Positives = 88/207 (42%), Gaps = 4/207 (1%)
Query: 16 LFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKS 75
+++Q + + LL S+ SW VII K+++ + ++ R+ FW +
Sbjct: 10 VWVQGDFVTRAVAVLLIGMSLASWIVIIIKALDILKFKKHARQARD-FWHSEDFAAGLTK 68
Query: 76 LKNHHNIGLAAIFMSA--MSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLS 133
L + + + + ++ ++ + + D + R + I + L+
Sbjct: 69 LGSDPSNPFRHLALEGREATQHHRNTQAHLHDSLDVSDWVTRCLRNCIDEFTARVQSGLA 128
Query: 134 FLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCVSIPS 192
L S+ S +G+ G V G+ +I + + + G I E+LI LGL V+IP+
Sbjct: 129 ILASVGSTAPFIGLFGTVWGIYHALVAIGASGQSTIDKVAGPIGEALIMTALGLAVAIPA 188
Query: 193 SIAYNKFIEDSKKFAMQMEGFANEFSA 219
+ YN + +K + FA++ A
Sbjct: 189 VLGYNALVRGNKSILHSLNSFAHDLHA 215
>gi|91775912|ref|YP_545668.1| MotA/TolQ/ExbB proton channel [Methylobacillus flagellatus KT]
gi|91709899|gb|ABE49827.1| outer membrane transport energization protein ExbB [Methylobacillus
flagellatus KT]
Length = 244
Score = 62.0 bits (149), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 93/207 (44%), Gaps = 20/207 (9%)
Query: 22 LAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG---------QSLETV 72
L V ++ L FS+++W++++ K Q + +++ FWS Q ++
Sbjct: 10 LIVDGVLYALIAFSVVTWTLLLVKGYQHWRAASQTKRYKKAFWSAPNIIAASEIQDVDGP 69
Query: 73 CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKL 132
+ L I A + + + D+ QD ++R + I +E + L
Sbjct: 70 AARVAQAGFNTLRDIDSHASHDLEHTGDR--------QDLLERSLRQQILKERRSLDSGL 121
Query: 133 SFLGSMSSAGLLVGILGAVLGMMGFFQSIA--GYYSNNVVSIPGIIESLISILLGLCVSI 190
+ L S+ S VG+ G V G+M +I G S VV+ P I E+L++ LG+ V++
Sbjct: 122 AVLASIGSTSPFVGLFGTVWGIMNALTNIGALGSASLEVVAGP-IGEALVATGLGIAVAV 180
Query: 191 PSSIAYNKFIEDSKKFAMQMEGFANEF 217
P+ +A+N F K ++ FA +
Sbjct: 181 PAVLAFNFFTRRLKLINGDLDDFAADL 207
>gi|15887516|ref|NP_353197.1| biopolymer transport protein [Agrobacterium tumefaciens str. C58]
gi|15155043|gb|AAK85982.1| biopolymer transport protein [Agrobacterium tumefaciens str. C58]
Length = 340
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 97/201 (48%), Gaps = 21/201 (10%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
++S + +FM VK ++ L S+++W+V + KS+ R + ++ ++L
Sbjct: 104 NLSPWGMFMAADWVVKGVMIGLAFASLVTWTVWVAKSIELAGARVRAGSTLKVIRRAKTL 163
Query: 70 ETVCKSLKNHHNIGLAAIFMS-AMSEWKKS------CDKGARSPIGIQDRIDRMM---DV 119
+++N G AA+ + A E + S D G GI++R+ + +
Sbjct: 164 AEATDAVENKG--GPAALMLRMATHEMQLSDAVVEHTDGG-----GIKERVSSALSRIET 216
Query: 120 AIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIES 178
R + T L+ +GS + VG+ G V G+M F SI+ + N+ V PGI E+
Sbjct: 217 HAGRRMSRGTGALATIGSTAP---FVGLFGTVWGIMNSFISISESQTTNLAVVAPGIAEA 273
Query: 179 LISILLGLCVSIPSSIAYNKF 199
L++ +GL +IP+ + YN F
Sbjct: 274 LLATAIGLVAAIPAVVIYNVF 294
>gi|196233275|ref|ZP_03132121.1| MotA/TolQ/ExbB proton channel [Chthoniobacter flavus Ellin428]
gi|196222746|gb|EDY17270.1| MotA/TolQ/ExbB proton channel [Chthoniobacter flavus Ellin428]
Length = 254
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 102/221 (46%), Gaps = 21/221 (9%)
Query: 17 FMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRR-QFR--EFEQLFWSGQSLETVC 73
F L K I+ LFI SI SWSV++ K F +RR Q R +F + F S + +
Sbjct: 20 FDHSTLPGKLILFTLFIASIFSWSVMVTK---FRLVRRAQTRRAQFLESFRSDRQPLRIY 76
Query: 74 KSLKNHHNIGLAAIFMSAMSEWK------KSCDKGARSPIGIQDRID----RMMDVAIAR 123
+ + A++ + E D+ R+ + I RI R++ A+ R
Sbjct: 77 TDRTRYDGAPVFAVYRAGCRELTFQLLGSAEVDETFRARLDIAQRISPAQMRVVTTAMER 136
Query: 124 ELEEITEKLS----FLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIES 178
+ E +L L + S +G+LG V G+M F +A S N+ ++ PG+ +
Sbjct: 137 AVGETALRLESQMILLATAVSGAPFLGLLGTVWGVMDTFGDVAAAGSANLAAMAPGVSAA 196
Query: 179 LISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
LI+ + GL V+IP+ YN + + + ++ FA E S+
Sbjct: 197 LITTVTGLLVAIPAMFGYNYLVTTIRAMIVGLDNFAAELSS 237
>gi|160900055|ref|YP_001565637.1| MotA/TolQ/ExbB proton channel [Delftia acidovorans SPH-1]
gi|160365639|gb|ABX37252.1| MotA/TolQ/ExbB proton channel [Delftia acidovorans SPH-1]
Length = 240
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 95/212 (44%), Gaps = 8/212 (3%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
I ++ Q + + +L S+ SW V+I K+++ + ++ R Q FW L +
Sbjct: 7 IAHVWTQGDFVTRAVAIILLAMSVASWLVMIIKALDIVKFKKLARN-AQDFWHSPDLASG 65
Query: 73 CKSLKNHHNIGLAAIFMS---AMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+ L + + + + A + +K+ + I D + R M I+ +
Sbjct: 66 LEKLGDDRSNPFRYLVLEGREATAHHRKTSAH-LHDTLDISDWVTRCMRNGISEFTARLQ 124
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGLC 187
L+ L S+ S +G+ G V G+ +I +G S + V+ P I E+LI LGL
Sbjct: 125 SGLAILASVGSTAPFIGLFGTVWGIYHALVAIGLSGQSSIDKVAGP-IGEALIMTALGLA 183
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
V+IP+ + YN + +K + FA++ A
Sbjct: 184 VAIPAVLGYNAVVRGNKSILNALNSFAHDMHA 215
>gi|171058255|ref|YP_001790604.1| MotA/TolQ/ExbB proton channel [Leptothrix cholodnii SP-6]
gi|170775700|gb|ACB33839.1| MotA/TolQ/ExbB proton channel [Leptothrix cholodnii SP-6]
Length = 266
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 97/237 (40%), Gaps = 50/237 (21%)
Query: 14 FALFMQMGLAV-KCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
F F+ AV K ++ +L + S+ SW++I+ K + + +R+ +F FW+ +SL+ V
Sbjct: 24 FGHFIAQSDAVGKTLLAVLVLMSVASWALILIKGLTQLIRQRRSGQFLNFFWNARSLDEV 83
Query: 73 CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGI----------------------- 109
++ H GAR P G
Sbjct: 84 SAEIQTH----------------------GARDPFGHLAAHAIHAQAHHARYGAAKLQEA 121
Query: 110 ---QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYS 166
Q+ + R + + E + L+ L ++ + VG+ G V G+ +I +
Sbjct: 122 GTSQEFVTRTIKKVLDEETTRLENGLTTLATIGATAPFVGLFGTVWGVYHALLAIGMSGA 181
Query: 167 NNVVSIPGII-ESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
+ + G + E+LI +GL V+IP+ +AYN ++ +++ FA E LS
Sbjct: 182 GTLDKVAGPVGEALIMTGIGLAVAIPAVMAYNAISRSNRVLNARLDAFAFELLTFLS 238
>gi|260219673|emb|CBA26518.1| Biopolymer transport protein exbB [Curvibacter putative symbiont of
Hydra magnipapillata]
Length = 239
Score = 61.6 bits (148), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 88/213 (41%), Gaps = 6/213 (2%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+ + L+ Q K + LL S+ SW VI+ K+++ + + E FW E
Sbjct: 5 LGLITLWTQGDWVTKSVAVLLLGMSLASWIVILIKTLDILKFKSLAARTE-YFWHSAEFE 63
Query: 71 TVCKSL---KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+L ++ + LA A + ++ + I D I R + +I
Sbjct: 64 EGIDTLGAPTDNPFVQLARAGQEATAH-HRNTQTQLHDALDISDWISRSLRNSIDDSTAR 122
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGL 186
L+ L S+ S VG+ G V G+ I + + G I E+LI LGL
Sbjct: 123 FQSGLAVLASVGSTAPFVGLFGTVWGIYHALMGIGASGQATIDKVAGPIGEALIMTALGL 182
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
V+IP+ + YN + +K ++ FA++ A
Sbjct: 183 AVAIPAVLGYNALVRGNKSILTKLNRFAHDLHA 215
>gi|171057502|ref|YP_001789851.1| MotA/TolQ/ExbB proton channel [Leptothrix cholodnii SP-6]
gi|170774947|gb|ACB33086.1| MotA/TolQ/ExbB proton channel [Leptothrix cholodnii SP-6]
Length = 265
Score = 61.6 bits (148), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 104/233 (44%), Gaps = 26/233 (11%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YGL+ AL+ Q K + +L + S+ SW VI K V L +Q
Sbjct: 50 NPYGLS-------ALWAQGDFVAKTTLLILVVMSMASWYVIFTKLVEQSKLNKQAAAARS 102
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRID--RMMDV 119
FW ++E K+ G A +++ +K D GA G+ +D + +
Sbjct: 103 NFWEADTVEIG----KDKLAAGSAFRYIA-----EKGLD-GASKHTGLLGAVDFNEWVTM 152
Query: 120 AIARELEEITEK----LSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIP 173
++ R + + + L+ L ++ S VG+ G V G+ I +G S + V+ P
Sbjct: 153 SLQRAINNVQSRMQDGLAVLATVGSTAPFVGLFGTVWGIYHALVKIGMSGQASIDKVAGP 212
Query: 174 GIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+ ESLI +GL V++P+ + YN + +K ++ F ++ A+L Q +
Sbjct: 213 -VGESLIMTAIGLAVAVPAVLGYNWLVRRNKAVMEEVNAFGSDLHAVLLGQAK 264
>gi|330822032|ref|YP_004350894.1| MotA/TolQ/ExbB proton channel [Burkholderia gladioli BSR3]
gi|327374027|gb|AEA65382.1| MotA/TolQ/ExbB proton channel [Burkholderia gladioli BSR3]
Length = 303
Score = 61.6 bits (148), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 103/228 (45%), Gaps = 25/228 (10%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YGL AL+ + ++ LL I S+ SW ++I K + + R+ + ++
Sbjct: 75 NPYGLG-------ALWKGGDFVARFVLVLLVIMSMGSWYIMITKFLEQLRANRRAKHADE 127
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDR--MMDV 119
W+ SL K L F++ + + + G + + +DR +D
Sbjct: 128 QLWTAPSLAEGVKLLDEASPF----RFLT-----ETAIEAGEHHQEALLEAVDRNTWIDA 178
Query: 120 AIARELEEITEK----LSFLGSMSSAGLLVGILGAVLGMMGFFQS--IAGYYSNNVVSIP 173
++ R + ++ + L+FL ++ S VG+ G V G+ + IAG S + V+ P
Sbjct: 179 SVERGITNVSNRMQDGLAFLATVGSTAPFVGLFGTVWGIYHALTAIGIAGQASIDKVAGP 238
Query: 174 GIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+ E+LI +GL V++P+ + YN + +K ++ F + ++
Sbjct: 239 -VGEALIMTAIGLAVAVPAVLGYNFLVRRNKSVMERVRNFGAQLHTVV 285
>gi|255320525|ref|ZP_05361706.1| biopolymer transport protein [Acinetobacter radioresistens SK82]
gi|262378417|ref|ZP_06071574.1| biopolymer transporter [Acinetobacter radioresistens SH164]
gi|255302497|gb|EET81733.1| biopolymer transport protein [Acinetobacter radioresistens SK82]
gi|262299702|gb|EEY87614.1| biopolymer transporter [Acinetobacter radioresistens SH164]
Length = 210
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 101/196 (51%), Gaps = 19/196 (9%)
Query: 31 LFIFSILSWSVIIQKSVNFITLRR-QFREFEQLFWSGQSLETVCKSLKNHHNI---GLAA 86
L + SI + ++ +++ FI L+R Q E + Q + V L + N+ L
Sbjct: 15 LVVCSIFTIAITLER---FIRLKRSQVIPVELILRHPQDIAPVIDRLSHAPNLQASTLGQ 71
Query: 87 IFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVG 146
I ++ + ++S ++ AR+ M+ ++E+ + + ++FLG++S+ L+G
Sbjct: 72 ILLTGYASRQES-EQFARA----------QMEAKASQEIGYLEKNINFLGTLSAVAPLIG 120
Query: 147 ILGAVLGMMGFFQSIA-GYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKK 205
+LG VLG++ F I G SN + IPGI ++LI+ G+ ++IP+ AY F ++
Sbjct: 121 LLGTVLGIIESFLVIDLGTTSNPGLMIPGISKALITTAAGMLIAIPALFAYRFFQRLVQE 180
Query: 206 FAMQMEGFANEFSAIL 221
+ ++E + F A L
Sbjct: 181 YVAELEQQSTLFHAAL 196
>gi|261823525|ref|YP_003261631.1| MotA/TolQ/ExbB proton channel [Pectobacterium wasabiae WPP163]
gi|261607538|gb|ACX90024.1| MotA/TolQ/ExbB proton channel [Pectobacterium wasabiae WPP163]
Length = 238
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 78/157 (49%), Gaps = 9/157 (5%)
Query: 67 QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
Q+ ET K + N+ LAA+ + + + I + DR++R + I RE
Sbjct: 59 QTPETSAKQPGSLANLALAAVKAPERISGQLALN------IHLPDRVERALQQQIQRERR 112
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILL 184
+ L+ L S+ S +G+ G V G+M Q I +G S + V+ P I +LI+ +
Sbjct: 113 SLESGLAVLASIGSTSPFIGLFGTVWGIMAALQEIGLSGSASLDTVAGP-IGNALIATGI 171
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
G+ V++P+ + YN F+ K M+ FA++ +++
Sbjct: 172 GIAVAVPAVLIYNYFLRRLKLAVADMDDFAHDVYSVM 208
>gi|253687542|ref|YP_003016732.1| MotA/TolQ/ExbB proton channel [Pectobacterium carotovorum subsp.
carotovorum PC1]
gi|251754120|gb|ACT12196.1| MotA/TolQ/ExbB proton channel [Pectobacterium carotovorum subsp.
carotovorum PC1]
Length = 246
Score = 61.2 bits (147), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 98/225 (43%), Gaps = 5/225 (2%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL- 69
+ I + Q + + +L I S+LSW+V++ K+ +TL + + FW SL
Sbjct: 4 LDIHHFWQQGDVVTHSVAIILLIMSLLSWTVMLFKARQLLTLNKSVQYSRHTFWQATSLQ 63
Query: 70 ETVCKSLKNHHN-IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
E+V K K N I A+ + + + D + R + + ++
Sbjct: 64 ESVEKFGKQRFNPFRDLVIEGHALLKHPHKFSSTLGGHVDLSDWLVRGLSNTLDTNSGKL 123
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLC 187
L L S+ S +G+LG V G+ Q+I+ ++ + G + E+LI GL
Sbjct: 124 QSGLGTLASIGSTAPFIGLLGTVWGIFHALQTISTIGQPDLAQVAGPVGEALIMTAFGLF 183
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL--SRQTEGNIS 230
V+IP+ + +N ++ M FA++ A L + E NI+
Sbjct: 184 VAIPAVLGFNAINRRNRIVLHAMNRFAHDLHAYLLTGARVETNIT 228
>gi|116620404|ref|YP_822560.1| MotA/TolQ/ExbB proton channel [Candidatus Solibacter usitatus
Ellin6076]
gi|116223566|gb|ABJ82275.1| MotA/TolQ/ExbB proton channel [Candidatus Solibacter usitatus
Ellin6076]
Length = 244
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 99/207 (47%), Gaps = 5/207 (2%)
Query: 15 ALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG---QSLET 71
+L+ QMG K ++ LFI S S V+I + + + R+Q R+F L+
Sbjct: 25 SLWKQMGPLAKAVVVGLFIMSAYSIGVMIDRLMAYSAARKQSRQFAPAVAGALREGKLDE 84
Query: 72 VCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEK 131
K + LA + ++ + E+ ++ + P + R ++ A A E+
Sbjct: 85 AVKIADRYKKSHLAKVVVAGLQEF-QAHQISSEIPGEEIEASKRALERAEAIVHAELKRG 143
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISILLGLCVSI 190
+S L ++ S VG+ G V+G++ F+ I+ S + ++ GI E+L++ +GL V+I
Sbjct: 144 VSGLATIGSTAPFVGLFGTVVGIINAFKGISNEKSTGLGAVAGGISEALVTTAIGLFVAI 203
Query: 191 PSSIAYNKFIEDSKKFAMQMEGFANEF 217
P+ +N F + F ++M ++E
Sbjct: 204 PAVWMFNYFTGKIESFDVEMGNSSSEL 230
>gi|299066429|emb|CBJ37614.1| Biopolymer transport protein [Ralstonia solanacearum CMR15]
Length = 243
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 100/236 (42%), Gaps = 15/236 (6%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
+ ++ + L+ Q + + LL + S+ SW VI+ K+ + I L+ + E+ FW
Sbjct: 1 MQELGLSHLWTQGDIVARGTALLLLLMSLASWIVILTKAWDLIRLKSMAQGAEKRFWHSD 60
Query: 68 SLETVCKSL---KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARE 124
+ +L K++ LA A + S + + I D I R + AI
Sbjct: 61 DFDHAMHTLGSSKDNPFYALAQTGREATQHHRASHPQ-LHDVMDISDWITRSLKSAIDES 119
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISIL 183
+ ++ L+ L S+ S VG+ G V G+ I + + G + ESLI
Sbjct: 120 VGQMQSGLAVLASVGSTAPFVGLFGTVWGIYHALIGIGAVGVPTIDKVAGPVGESLIMTA 179
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL----------SRQTEGNI 229
GL V+IP+ + YN +K ++ FA++ A +RQ + N+
Sbjct: 180 FGLAVAIPAVLGYNALTRGNKSVIAKLNRFAHDLHAYFVTGARLRPGSARQDDANV 235
>gi|219872226|ref|YP_002476601.1| biopolymer transport ExbB protein [Haemophilus parasuis SH0165]
gi|219692430|gb|ACL33653.1| biopolymer transport ExbB protein [Haemophilus parasuis SH0165]
Length = 222
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 103/212 (48%), Gaps = 7/212 (3%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+++ L Q + + +L + SILSW++I+ + + I +R+ ++ QL S ++L
Sbjct: 1 MNLIQLLQQQDIVLSISFGILVVMSILSWTIILIRLIKMIGVRKNNQQSFQLVKSAENLT 60
Query: 71 TVCKSLKNHHNIGLAAIFMSAMS--EWKKSCDKGARS-PIGIQDRIDRMMDVAIARELEE 127
+ ++N + +A I E ++ +K S + +D + + AI + L +
Sbjct: 61 QAEQYIQNKRS-EIADILQLTFKQCELYQAKEKNHLSHQLPFKDFLTLHLRNAITQSLRK 119
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA--GYYSNNVVSIPGIIESLISILLG 185
L L S+ + +G+ G V G+ I+ G S VS P I E+L++ +G
Sbjct: 120 YDGGLVALASIGAVAPFIGLFGTVWGIFNALMDISQQGQVSIATVSAP-IGEALVATAMG 178
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEF 217
L V+IP+ +AYN ++ + ++ +ANE
Sbjct: 179 LFVAIPAVLAYNLITRLNRNLSQDLDHYANEL 210
>gi|226227351|ref|YP_002761457.1| putative biopolymer transport protein [Gemmatimonas aurantiaca
T-27]
gi|226090542|dbj|BAH38987.1| putative biopolymer transport protein [Gemmatimonas aurantiaca
T-27]
Length = 233
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 103/221 (46%), Gaps = 8/221 (3%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLET 71
S+ +L + K ++ LL + S+ SW ++ K F R F F + ++
Sbjct: 10 SLISLVITSDPVTKFVLGLLAVLSLASWGIMFAKWRAFSAAEANGRSFVHEFERARGIDD 69
Query: 72 VCKSLKNHHNIGLAAIFMSAM-------SEWKKSCDKGARSPIGIQDRIDRMMDVAIARE 124
+ + A+F A+ + D+ AR + + ++D +E
Sbjct: 70 AMLLAQRVKSSAFTAVFSRAVQFLHDTKPALGATSDRTARLSGSQVEALRLVLDAESGKE 129
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISIL 183
EE+ + +L ++ S L+G+ G VLG++ F+ IA S N+ ++ PGI +L++
Sbjct: 130 REELGRFIPWLATVGSVSPLIGLFGTVLGVIEAFEGIATKGSGNIGAVAPGIATALLATA 189
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
L V+IP++ AYN F +F +EGF +E A++ R+
Sbjct: 190 AALAVAIPAAFAYNVFASRLNRFDNSLEGFGSELIALMVRE 230
>gi|302878962|ref|YP_003847526.1| MotA/TolQ/ExbB proton channel [Gallionella capsiferriformans ES-2]
gi|302581751|gb|ADL55762.1| MotA/TolQ/ExbB proton channel [Gallionella capsiferriformans ES-2]
Length = 218
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 93/190 (48%), Gaps = 12/190 (6%)
Query: 35 SILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSE 94
S+ +WS+ + K R+ R F FW+ + + + + + +A + + SE
Sbjct: 23 SVATWSIALFKLWKQTKDRKHNRTFHGAFWAASNW-SAAEGVASEGEGDVALLAKAGFSE 81
Query: 95 WKK-SCDK----GARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILG 149
+ D+ +P I +R R I R E +L+ +GS + VG+ G
Sbjct: 82 LRALGSDRQDLMHTGAPQEILERQLRQQVENIKRYHERGLAELATIGSTAP---FVGLFG 138
Query: 150 AVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFA 207
V G+M QSI +G S +VV+ P I E+LI+ +G+ ++P+ +AYN F+ + K
Sbjct: 139 TVWGIMHALQSIGQSGAASLDVVAGP-IGEALIATAIGIATALPAVLAYNYFLRNLKVRI 197
Query: 208 MQMEGFANEF 217
++E FA++F
Sbjct: 198 TELENFAHDF 207
>gi|120613185|ref|YP_972863.1| MotA/TolQ/ExbB proton channel [Acidovorax citrulli AAC00-1]
gi|120591649|gb|ABM35089.1| MotA/TolQ/ExbB proton channel [Acidovorax citrulli AAC00-1]
Length = 222
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 97/210 (46%), Gaps = 8/210 (3%)
Query: 17 FMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQL---FWSGQSLETVC 73
+ Q + + LL SI SW VI+ K+ LRR E+ FWS +L +
Sbjct: 7 WHQGDMVTRISALLLLSMSIASWVVILWKAR---LLRRAVAGVERSTAEFWSSPTLASAR 63
Query: 74 KSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQ-DRIDRMMDVAIARELEEITEKL 132
+ L GL + A + + G+ + G + ++ R++ A+ R L +
Sbjct: 64 ERLVPADPDGLLRPLVDAATGVADNAHAGSLAASGQRSQQLTRVLRDALHRVLARLEFGQ 123
Query: 133 SFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCVSIP 191
L ++ S VG+LG V G+ ++AG + ++ + G + E+L+ GL V+IP
Sbjct: 124 VLLATVGSTAPFVGLLGTVWGIYHALTALAGGGAVSIDRVAGPVGEALVMTAAGLAVAIP 183
Query: 192 SSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+ +AYN F + ++EGFA + +L
Sbjct: 184 AVLAYNLFGRWIGRVEAELEGFALDLRELL 213
>gi|120611968|ref|YP_971646.1| MotA/TolQ/ExbB proton channel [Acidovorax citrulli AAC00-1]
gi|120590432|gb|ABM33872.1| outer membrane transport energization protein ExbB [Acidovorax
citrulli AAC00-1]
Length = 238
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 87/207 (42%), Gaps = 4/207 (1%)
Query: 16 LFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKS 75
+++Q + + LL S+ SW VI+ K+++ I ++ R FW + +
Sbjct: 10 VWIQGDFVTRAVAVLLLGMSLASWIVILIKALDIIKFKKHARGARD-FWHSEDFAAGMEK 68
Query: 76 LKNHHNIGLAAIFMSA--MSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLS 133
L N + + + + ++ + + D I R + I + L+
Sbjct: 69 LGNDPSNPFRHLALEGREATAHHRNTKAHLHDSLDVSDWITRSLRNCIDEFTARLQSGLA 128
Query: 134 FLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCVSIPS 192
L S+ S +G+ G V G+ +I + + + G I E+LI LGL V+IP+
Sbjct: 129 VLASVGSTAPFIGLFGTVWGIYHALVAIGASGQSTIDKVAGPIGEALIMTALGLAVAIPA 188
Query: 193 SIAYNKFIEDSKKFAMQMEGFANEFSA 219
+ YN + +K + FA++ A
Sbjct: 189 VLGYNALVRGNKSILNGLNSFAHDLHA 215
>gi|78065826|ref|YP_368595.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. 383]
gi|77966571|gb|ABB07951.1| outer membrane transport energization protein ExbB [Burkholderia
sp. 383]
Length = 262
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 99/230 (43%), Gaps = 37/230 (16%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YGL AL+ + + +L + S+ SW +I+ K + + R+ + E
Sbjct: 30 NPYGLD-------ALWKGGDFIARGTLLILVVMSMGSWYIIVAKLLEQARVLRRAKAAET 82
Query: 62 LFWSGQSLETVCKSLKNHH------NIGLAAI--FMSAMSEWKKSCDKGARSPIGIQDRI 113
FW SL K L GLAA A+ E Q +
Sbjct: 83 GFWKAGSLSEGTKKLDTGSPFRFIAETGLAAFDHHEGALVE---------------QVDL 127
Query: 114 DRMMDVAIARELEEITEKL----SFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSN 167
++ + AI R ++ +L +FLG++ S +G+ G V G+ +I AG S
Sbjct: 128 NQWVAAAIERATTSVSSRLQDGLAFLGTVGSTAPFIGLFGTVWGIYHALTAIGIAGQASI 187
Query: 168 NVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEF 217
+ V+ P + E+LI +GL V++P+ + YN + +K ++ GF+ E
Sbjct: 188 DKVAGP-VGEALIMTAIGLAVAVPAVLGYNWLVRRNKAVMERVRGFSTEL 236
>gi|108763298|ref|YP_629705.1| MotA/TolQ/ExbB proton channel family protein [Myxococcus xanthus DK
1622]
gi|108467178|gb|ABF92363.1| transporter, MotA/TolQ/ExbB proton channel family [Myxococcus
xanthus DK 1622]
Length = 227
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 110/228 (48%), Gaps = 18/228 (7%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
M ++ ++ GL + II L I SI S V+ ++ + F R R F G
Sbjct: 1 MQFTLAEIWDHTGLFARMIIFTLGIMSIASLVVLAERMIVFRKTRSDSRNFAAKM--GAI 58
Query: 69 LETVCKSLKNHHNIG-----LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAR 123
L + + N+G L + S ++ ++ S + + ++ + R ++ R
Sbjct: 59 LAKGDLNTAANTNLGKDVGHLGRVINSGLTAYRISPNN---KDVAVES-VARALERQAQR 114
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISI 182
E++ + L L ++ S VG+LG +G++ FQ +A S + +I GI E+LI+
Sbjct: 115 EVQSMKRGLGLLATVGSTAPFVGLLGTTMGIVNAFQLMAQAGSGGLGTISAGIAEALITT 174
Query: 183 LLGLCVSIPSSIAYNKFIE---DSKKFAMQMEGFANEFSAILSRQTEG 227
GL V+IP+ +AYN F++ D++ ++ + +NEF +++R G
Sbjct: 175 AFGLLVAIPAVMAYN-FLQGWVDAR--SVDISESSNEFLDVVARHLGG 219
>gi|319409303|emb|CBI82947.1| Biopolymer transport exbB protein [Bartonella schoenbuchensis R1]
Length = 246
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 98/236 (41%), Gaps = 25/236 (10%)
Query: 16 LFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKS 75
+FM V+ +I +L + S++SW++ + K V +R+ Q + Q+ +
Sbjct: 1 MFMAADGVVQAVIVVLMLASLISWTIALAKIVEITWAKRKAHRALQFVLNAQTFTHLTSD 60
Query: 76 LKNHHN-----IGLAAIFMS-AMSEWKKSCDK-------GARSPI-----------GIQD 111
KN +G AIF+ + E S + G R G+++
Sbjct: 61 FKNQQEANSVFLGAGAIFLEETLKEVNLSTQQVVFIKFQGTRERKDDDSALCAFNEGVKE 120
Query: 112 RIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-V 170
R+ ++ + + + L ++ + VG+ V G+M F IA + + V
Sbjct: 121 RVHLLLARCVLTATRHMACGTAVLATIGAIAPFVGLFATVWGIMNAFIGIAQTQTTRLDV 180
Query: 171 SIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
PGI E+L++ +GL V+IP+ + YN + + A +LSR+ +
Sbjct: 181 VAPGIAEALLATAIGLFVAIPAVVMYNGLTRALNGYRNDLGDIAAAIERLLSRELD 236
>gi|329902500|ref|ZP_08273130.1| MotA/TolQ/ExbB proton channel family protein [Oxalobacteraceae
bacterium IMCC9480]
gi|327548761|gb|EGF33399.1| MotA/TolQ/ExbB proton channel family protein [Oxalobacteraceae
bacterium IMCC9480]
Length = 298
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 105/228 (46%), Gaps = 25/228 (10%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YGL AL+ + + + +L + S+ SW VII K ++ + L Q E +
Sbjct: 76 NPYGLD-------ALWKGGDIVARGTLVILVLMSMSSWYVIITKLIDQVKLGGQAAEAGK 128
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRID--RMMDV 119
FW ++++ SLK A +E K+ + + ID + +
Sbjct: 129 KFWDAKTVDAGTASLKEGSPFRFIAETGIKSTEHKEGA---------LLEHIDLNTWVTM 179
Query: 120 AIARELEEITEK----LSFLGSMSSAGLLVGILGAVLGMMGFFQS--IAGYYSNNVVSIP 173
+I R +E++ + L+ L ++ S VG+ G V G+ + IAG S + V+ P
Sbjct: 180 SIQRAVEKVQSRLQDGLALLATVGSTAPFVGLFGTVWGIYNALTAIGIAGQASIDKVAGP 239
Query: 174 GIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+ E+LI +GL V++P+ + YN + +K + F+++ ++L
Sbjct: 240 -VGEALIMTAIGLGVAVPAVLGYNFLVRRNKTAMENVRTFSSDLHSVL 286
>gi|91790436|ref|YP_551388.1| MotA/TolQ/ExbB proton channel [Polaromonas sp. JS666]
gi|91699661|gb|ABE46490.1| MotA/TolQ/ExbB proton channel [Polaromonas sp. JS666]
Length = 214
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 97/218 (44%), Gaps = 20/218 (9%)
Query: 14 FALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ---LFWSGQSLE 70
F+L Q G+ + + LL S+ SW VI+ K+ L R + + +FW S+E
Sbjct: 4 FSLMTQGGVVSQLVAVLLLAMSVASWVVILWKA---WLLHRALGDVARSTAVFWQSVSIE 60
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
+ + L + A ++ + GA DR ++ V + L I
Sbjct: 61 EASQKVAAFDREALVLPLIDA-TKLRAIGTLGAAG-----DRAQQLTRV-LRDALHAILH 113
Query: 131 KLSF----LGSMSSAGLLVGILGAVLGMMGFFQSIA--GYYSNNVVSIPGIIESLISILL 184
KL F L ++ S VG+LG V G+ IA G + + VS P + E+LI
Sbjct: 114 KLQFGQVLLATVGSTAPFVGLLGTVWGIYHALIGIASAGQITIDKVSGP-VGEALIMTAA 172
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
GL V+IP+ +AYN F + +EGFA + +L+
Sbjct: 173 GLAVAIPAVLAYNIFGRHIGRIEADLEGFARDLRELLA 210
>gi|300703736|ref|YP_003745338.1| biopolymer transport protein [Ralstonia solanacearum CFBP2957]
gi|299071399|emb|CBJ42718.1| Biopolymer transport protein [Ralstonia solanacearum CFBP2957]
Length = 243
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 95/216 (43%), Gaps = 5/216 (2%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
+ ++ + L+ Q + + LL + S+ SW VI+ K+ + I L+ + E+ FW
Sbjct: 1 MQELGLSHLWTQGDIVARGTALLLLLMSLASWIVILTKAWDLIRLKSMAQGAEKRFWHSD 60
Query: 68 SLETVCKSL---KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARE 124
+ ++L K++ LA A + S + + I D I R + AI
Sbjct: 61 DFDHAMQTLGSPKDNPFYALAQTGREAAQHHRASHPQ-LHDVMDISDWITRSLKSAIDES 119
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISIL 183
+ ++ L+ L S+ S VG+ G V G+ I + + G + ESLI
Sbjct: 120 VGQMQSGLAVLASVGSTAPFVGLFGTVWGIYHALIGIGAVGVPTIDKVAGPVGESLIMTA 179
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
GL V+IP+ + YN +K ++ FA++ A
Sbjct: 180 FGLAVAIPAVLGYNALTRGNKSVIAKLNRFAHDLHA 215
>gi|115374109|ref|ZP_01461397.1| TolQ protein [Stigmatella aurantiaca DW4/3-1]
gi|310825543|ref|YP_003957901.1| MotA/TolQ/ExbB proton channel family protein [Stigmatella
aurantiaca DW4/3-1]
gi|115368885|gb|EAU67832.1| TolQ protein [Stigmatella aurantiaca DW4/3-1]
gi|309398615|gb|ADO76074.1| MotA/TolQ/ExbB proton channel family protein [Stigmatella
aurantiaca DW4/3-1]
Length = 224
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 92/179 (51%), Gaps = 20/179 (11%)
Query: 27 IITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAA 86
++ +L + S+LS ++++++++ F R E + S E V ++K + AA
Sbjct: 33 VLWVLTVLSVLSIAIMLERALYFARHRLSQSEALAVRLSRGEFEAVRAAVKGRRGME-AA 91
Query: 87 IFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVG 146
+ A++ + +GA D +++++ +ARE + LSFLG++ + +G
Sbjct: 92 VLQEALA----ASSRGA-------DAVEQLIASVVARERPQYERFLSFLGTLGNNAPFIG 140
Query: 147 ILGAVLGMMGFFQSI------AGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKF 199
+ G VLG++ F + G V++ GI E+L++ +GL V+IP+ +A+N F
Sbjct: 141 LFGTVLGIIKAFHDLGSLSAKGGAIQQTVMA--GISEALVATAVGLAVAIPAVVAFNVF 197
>gi|49476130|ref|YP_034171.1| biopolymer transport exbB protein [Bartonella henselae str.
Houston-1]
gi|49238938|emb|CAF28234.1| Biopolymer transport exbB protein [Bartonella henselae str.
Houston-1]
Length = 280
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 109/253 (43%), Gaps = 35/253 (13%)
Query: 7 AIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG 66
A D+S F++FM VK +I LL + S+ SW++ K + +R+ R +L S
Sbjct: 16 AAHDLSPFSMFMAADFVVKAVIVLLLLASLASWTIAFVKIIEITLAKRKARHELRLVLSA 75
Query: 67 QSLETVCKSLKNHHNIG-------LAAIFMSA-----MSEWKKSCDKGARSPI------- 107
Q+L + SLK+ G L +++S ++ S +G ++ +
Sbjct: 76 QTLTRLAASLKDSKGPGVFFFKEMLKEVYLSTQKVNFIATEDSSERQGEQTVVCEDAIPY 135
Query: 108 ---------------GIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVL 152
G+++R+ ++ + + + L ++ + VG+ V
Sbjct: 136 AEIARYGETARGVNEGLKERVHSLLSRCLLAATRRVACGSAVLATIGAIAPFVGLFATVW 195
Query: 153 GMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
G+M F IA + + V PGI E+L++ +GL V+IP+ + YN + + +
Sbjct: 196 GIMNSFIGIAQSQTTRLDVVAPGIAEALLATAIGLFVAIPAVVMYNSLMRALSGYRNDLG 255
Query: 212 GFANEFSAILSRQ 224
A +LSR+
Sbjct: 256 DIAAALERLLSRE 268
>gi|91976831|ref|YP_569490.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris BisB5]
gi|91683287|gb|ABE39589.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris BisB5]
Length = 265
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 88/194 (45%), Gaps = 11/194 (5%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQF---REFEQLFWSG 66
D+S + +F+ + V+ ++ L + S+ +W+V + KS I LRR R L +G
Sbjct: 43 DLSPWGMFVNADMVVRTVMIGLALASLAAWTVWLAKS---IELRRNVTLARRGLDLLDNG 99
Query: 67 QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
+L V + +A + S E S G G DR+ ++ A +
Sbjct: 100 ATLAQVEAECGEDSDT-VAQMIRSVAREASLS---GGIQDDGFADRVSLRLERVEAAAVR 155
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLG 185
+ L S+ + VG+ G V G+M F I+ + N+ V PGI E+L++ LG
Sbjct: 156 RVAIGTGLLASIGAVAPFVGLFGTVWGIMNAFIGISKANTTNLAVVAPGIAEALLATALG 215
Query: 186 LCVSIPSSIAYNKF 199
L +IP+ + YN
Sbjct: 216 LVAAIPAVVIYNHL 229
>gi|46200994|ref|ZP_00207926.1| COG0811: Biopolymer transport proteins [Magnetospirillum
magnetotacticum MS-1]
Length = 266
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 97/222 (43%), Gaps = 13/222 (5%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YGL AL+ Q K + +L + S+ SW +++ K V + R +E
Sbjct: 42 NPYGLE-------ALWAQGDFVSKGTLLILALMSMASWYILVIKLVEQSRMLRHAKEAGA 94
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
FW S+ ++L A S+ + + D I + I + A+
Sbjct: 95 GFWKAASISDGARALAEDSPFRFVA---SSGMDAARHHDGSLTEKIDLNTWITMSIQRAV 151
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESL 179
+ ++ L+ L ++ S VG+ G V G+ +I AG + + V+ P + E+L
Sbjct: 152 GDIVSDLQGGLAVLATVGSTAPFVGLFGTVWGIYHALTAIGIAGQAAIDKVAGP-VGEAL 210
Query: 180 ISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
I GL V++P+ + YN + +K A ++ FA + A+L
Sbjct: 211 IMTAFGLAVAVPAVLGYNLLVRRNKLVAEKVRSFAADLHAVL 252
>gi|330955761|gb|EGH56021.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae Cit 7]
Length = 143
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 61/109 (55%), Gaps = 1/109 (0%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
QDR++R + I RE + L+ L S+ S +G+ G V G+M + I+ S ++
Sbjct: 1 QDRLERALRQQIVRERRSLETGLAILASIGSTSPFIGLFGTVWGIMSALKGISAAGSASL 60
Query: 170 VSIPGII-ESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEF 217
++ G I +L++ +G+ V++P+ + YN F+ K A ++ FA++F
Sbjct: 61 ETVAGPIGAALVATGVGIAVAVPAVLIYNYFLRRLKLTAADLDDFAHDF 109
>gi|227824312|ref|ZP_03989144.1| predicted protein [Acidaminococcus sp. D21]
gi|226904811|gb|EEH90729.1| predicted protein [Acidaminococcus sp. D21]
Length = 211
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 57/106 (53%)
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILL 184
L+ E LS+L + + L+G+LG + GMM F ++ + N GI E+LI+ +
Sbjct: 106 LDRYKEGLSYLSVIITLAPLLGLLGTITGMMASFGNLGSRWENPFAVTSGIGEALITTVF 165
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
GL ++I + + F E + A+ ME A+ FS + RQ +G+ S
Sbjct: 166 GLAIAIVTLCCHAYFEERVHRIALDMEMIASTFSEAIVRQKKGDQS 211
>gi|121596207|ref|YP_988103.1| MotA/TolQ/ExbB proton channel [Acidovorax sp. JS42]
gi|120608287|gb|ABM44027.1| MotA/TolQ/ExbB proton channel [Acidovorax sp. JS42]
Length = 219
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 84/192 (43%), Gaps = 7/192 (3%)
Query: 30 LLFIFSILSWSVIIQKSVNFITLRRQFREFEQ---LFWSGQSLETVCKSLKNHHNIGLAA 86
LL S+ SW VI K +RR + + FW SL + L GL
Sbjct: 20 LLLAMSVASWVVIFWK---LRLMRRAHVDVPRSTAAFWQAPSLAAAAERLPAFDREGLVL 76
Query: 87 IFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVG 146
+ A + +++ G+ R+ R++ A+ L ++ L ++ S VG
Sbjct: 77 PLVRAAQQVEQAGAATLAGQGGLSQRLTRVLRDALHGVLGKLQFGQVLLATVGSTAPFVG 136
Query: 147 ILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCVSIPSSIAYNKFIEDSKK 205
+LG V G+ ++AG ++ + G + E+LI GL V+IP+ +AYN F +
Sbjct: 137 LLGTVWGIYHALTAMAGAGQISIERVAGPVGEALIMTAAGLTVAIPAVLAYNWFGRVIGR 196
Query: 206 FAMQMEGFANEF 217
+EGFA +
Sbjct: 197 IEADLEGFARDL 208
>gi|222112434|ref|YP_002554698.1| mota/tolq/exbb proton channel [Acidovorax ebreus TPSY]
gi|221731878|gb|ACM34698.1| MotA/TolQ/ExbB proton channel [Acidovorax ebreus TPSY]
Length = 222
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 84/192 (43%), Gaps = 7/192 (3%)
Query: 30 LLFIFSILSWSVIIQKSVNFITLRRQFREFEQ---LFWSGQSLETVCKSLKNHHNIGLAA 86
LL S+ SW VI K +RR + + FW SL + L GL
Sbjct: 20 LLLAMSVASWVVIFWK---LRLMRRAHVDVPRSTAAFWQAPSLAAAAERLPAFDREGLVL 76
Query: 87 IFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVG 146
+ A + +++ G+ R+ R++ A+ L ++ L ++ S VG
Sbjct: 77 PLVRAAQQVEQAGAATLAGQGGLSQRLTRVLRDALHGVLGKLQFGQVLLATVGSTAPFVG 136
Query: 147 ILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCVSIPSSIAYNKFIEDSKK 205
+LG V G+ ++AG ++ + G + E+LI GL V+IP+ +AYN F +
Sbjct: 137 LLGTVWGIYHALTAMAGAGQISIERVAGPVGEALIMTAAGLTVAIPAVLAYNWFGRVIGR 196
Query: 206 FAMQMEGFANEF 217
+EGFA +
Sbjct: 197 IEADLEGFARDL 208
>gi|17546683|ref|NP_520085.1| biopolymer transport transmembrane protein [Ralstonia solanacearum
GMI1000]
gi|17428982|emb|CAD15666.1| probable biopolymer transport transmembrane protein [Ralstonia
solanacearum GMI1000]
Length = 243
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 98/228 (42%), Gaps = 8/228 (3%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
+ ++ + L+ Q + + LL + S+ SW VI+ K+ + I L+ + E+ FW
Sbjct: 1 MQELGLSHLWTQGDIVARGTALLLLLMSLASWIVILTKAWDLIRLKSMAQGAEKRFWHSD 60
Query: 68 SLETVCKSL---KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARE 124
+ +L K++ LA A + S + + I D I R + AI
Sbjct: 61 DFDHAMHTLGSPKDNPFYALAQTGREAAQHHRASHPQ-LHDVMDISDWITRSLKSAIDES 119
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISIL 183
+ ++ L+ L S+ S VG+ G V G+ I + + G + ESLI
Sbjct: 120 VGQMQSGLAVLASVGSTAPFVGLFGTVWGIYHALIGIGAVGVPTIDKVAGPVGESLIMTA 179
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL---SRQTEGN 228
GL V+IP+ + YN +K ++ FA++ A +R GN
Sbjct: 180 FGLAVAIPAVLGYNALTRGNKSVIAKLNRFAHDLHAYFVTGARLRPGN 227
>gi|319779493|ref|YP_004130406.1| MotA/TolQ/ExbB proton channel family protein [Taylorella
equigenitalis MCE9]
gi|317109517|gb|ADU92263.1| MotA/TolQ/ExbB proton channel family protein [Taylorella
equigenitalis MCE9]
Length = 239
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/212 (19%), Positives = 102/212 (48%), Gaps = 5/212 (2%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
MD+S+ +F Q + + +L + S+++W+VII +++ ++ + ++ W+ +
Sbjct: 1 MDLSL--VFKQGDPVLIAVFLILILMSVITWTVIIVRALKLFVVKGKNKKALSRIWASKD 58
Query: 69 LETVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
+ V ++ + +A + AM + + I + + + R + +I + +
Sbjct: 59 MSEVEAFVRKDTSTISNVAENGIDAMKKHTSTDGNFLGREISLDEFVGRGLRNSIKQTMR 118
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLG 185
L+ L S+ + +G+ G V G+ +I+ ++ ++ G I E+L++ G
Sbjct: 119 RFEGGLTALASIGATAPFIGLFGTVWGIYHALINISAEGQMSIAAVAGPIGEALVATAAG 178
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEF 217
L V+IP+ + YN + +K ++ FA++F
Sbjct: 179 LFVAIPAVLVYNALVRSNKTLQQDLDAFAHDF 210
>gi|326319250|ref|YP_004236922.1| MotA/TolQ/ExbB proton channel [Acidovorax avenae subsp. avenae ATCC
19860]
gi|323376086|gb|ADX48355.1| MotA/TolQ/ExbB proton channel [Acidovorax avenae subsp. avenae ATCC
19860]
Length = 222
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 89/190 (46%), Gaps = 8/190 (4%)
Query: 30 LLFIFSILSWSVIIQKSVNFITLRRQFREFEQL---FWSGQSLETVCKSLKNHHNIGLAA 86
LL SI SW VI+ K+ LRR E+ FW +LE+ + L GL
Sbjct: 20 LLLAMSIASWVVILWKAR---LLRRAVAGVERSTAEFWRSPTLESARERLVPVDPDGLVR 76
Query: 87 IFMSAMSEWKKSCDKGARSPIGIQ-DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLV 145
+ A + + G+ + G + ++ R++ A+ R L + L ++ S V
Sbjct: 77 PLVDAAAGIANNAQAGSLAASGQRSQQLTRVLRDALHRVLARLQFGQVLLATVGSTAPFV 136
Query: 146 GILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCVSIPSSIAYNKFIEDSK 204
G+LG V G+ ++AG + ++ + G + E+L+ GL V+IP+ +AYN F
Sbjct: 137 GLLGTVWGIYHALTALAGGGAVSIDRVAGPVGEALVMTAAGLAVAIPAVLAYNLFGRWIG 196
Query: 205 KFAMQMEGFA 214
+ +EGFA
Sbjct: 197 RVEADLEGFA 206
>gi|319899357|ref|YP_004159454.1| biopolymer transport exbB protein [Bartonella clarridgeiae 73]
gi|319403325|emb|CBI76884.1| Biopolymer transport exbB protein [Bartonella clarridgeiae 73]
Length = 273
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 109/247 (44%), Gaps = 27/247 (10%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
+ +++ D S F++FM VK +I L + S+LSW++ K V + + R Q
Sbjct: 11 DTVTVSMHDFSPFSMFMAADWVVKAVIIFLLLTSLLSWTIAFVKIVELTVAKYKARHALQ 70
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFM--------SAMSEWKKSCDK------------ 101
L S Q+L + S K I A+F+ S+ KS D
Sbjct: 71 LTKSAQTLAGLAASFK---EIKGTAVFLLEETLKEIRLSSQLVKSDDSNNNQCEAFSYDI 127
Query: 102 ---GARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFF 158
G+ S G+++R+ ++ + + I + L ++ S VG+ V G+M F
Sbjct: 128 FSCGSISINGVKERVHSLLSRCLLAAMRRIACGTAILATIGSVAPFVGLFATVWGIMNSF 187
Query: 159 QSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEF 217
IA + + V PGI E+L++ +GL V+IP+ I YN FI + + A
Sbjct: 188 IGIAKSQTTRLDVVAPGIAEALLATAIGLFVAIPAVIIYNSFIRVLNGYRNDLADIAAAI 247
Query: 218 SAILSRQ 224
++SR+
Sbjct: 248 ERLVSRE 254
>gi|83944057|ref|ZP_00956514.1| biopolymer transport protein ExbB [Sulfitobacter sp. EE-36]
gi|83845304|gb|EAP83184.1| biopolymer transport protein ExbB [Sulfitobacter sp. EE-36]
Length = 287
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 92/194 (47%), Gaps = 21/194 (10%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSV----IIQKSVNFITLRRQFREFEQLFWSGQ 67
S A+FM + VK ++ L I S+L W+V I+Q S LRR +R+ + +G
Sbjct: 56 SPLAMFMGADIVVKAVMFGLAIASVLGWAVWAGKILQVSWANARLRRSYRKLAK---AGA 112
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKS--CDKGARSPIGIQDRIDRMMDVAIAREL 125
KS + A+ +A++E S +K GI++R+ + A
Sbjct: 113 VKGAQAKSFSGP----MRAMIRAALAEIDISDGLNKA-----GIKERVASELSRIEAGAA 163
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA--GYYSNNVVSIPGIIESLISIL 183
+ LGS+ S +G+ G V G+M F IA G S VV+ PGI E+L++
Sbjct: 164 RSMQSGAMILGSIGSTAPFIGLFGTVWGIMNSFIGIAESGSTSLTVVA-PGIAEALLATA 222
Query: 184 LGLCVSIPSSIAYN 197
+GL +IP+ + YN
Sbjct: 223 IGLVAAIPAVLLYN 236
>gi|153003741|ref|YP_001378066.1| MotA/TolQ/ExbB proton channel [Anaeromyxobacter sp. Fw109-5]
gi|152027314|gb|ABS25082.1| MotA/TolQ/ExbB proton channel [Anaeromyxobacter sp. Fw109-5]
Length = 240
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 101/219 (46%), Gaps = 18/219 (8%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
M S+F LF + G + ++ LL S+ S +VI++++V F RR + L G+
Sbjct: 1 MTKSLFELFTRAG--AEWVMLLLVGLSVASVAVILERTVYFARRRRACPDLLALLRDGRL 58
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
E + H GL A A + + D G P +Q+ + AIA
Sbjct: 59 EEARGRV---EHQRGLEAEVARAALD---AADGG---PAAVQE----AVACAIAERRLAY 105
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVS---IPGIIESLISILLG 185
LSFLG++ + +G+ G V+G++ F +A + + + GI E+L++ +G
Sbjct: 106 ERGLSFLGTLGNNAPFLGLFGTVVGIIRAFSDLAVGAAQGAGASAVMSGISEALVATAVG 165
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+ V+IP+ +A+N F + + E + ++ L R
Sbjct: 166 IFVAIPAVVAFNGFQRWLRSLVTRAEAVGHALASHLERD 204
>gi|187925355|ref|YP_001896997.1| MotA/TolQ/ExbB proton channel [Burkholderia phytofirmans PsJN]
gi|187716549|gb|ACD17773.1| MotA/TolQ/ExbB proton channel [Burkholderia phytofirmans PsJN]
Length = 238
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 90/210 (42%), Gaps = 24/210 (11%)
Query: 30 LLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHN------IG 83
+L SI SW +I KS +RQ LFW +L +LK +
Sbjct: 24 VLLAMSIASWCFLIVKSWILTRAKRQATRAIALFWQAPTLSEGVAALKRADRERVFTPLA 83
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDV--AIARELEEITEKLSF----LGS 137
AA+ S + P + R++R V A+ + L +L F L S
Sbjct: 84 EAALHASEVD-----------IPGALLARVERGERVLRALRQALSASQRRLEFGQVLLAS 132
Query: 138 MSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCVSIPSSIAY 196
+ S VG+LG V G+ SIA + ++ G + E+LI GL V+IP+ +AY
Sbjct: 133 VGSTAPFVGLLGTVWGIYHALGSIAASGQAQIENVAGPVGEALIMTAFGLVVAIPAVLAY 192
Query: 197 NKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
N ++ + +++GFA++ A + E
Sbjct: 193 NVLGRMVRQLSEELDGFAHDLHAYVCAPAE 222
>gi|257470246|ref|ZP_05634337.1| biopolymer transport exbB protein [Fusobacterium ulcerans ATCC
49185]
gi|317064459|ref|ZP_07928944.1| biopolymer transport exbB protein [Fusobacterium ulcerans ATCC
49185]
gi|313690135|gb|EFS26970.1| biopolymer transport exbB protein [Fusobacterium ulcerans ATCC
49185]
Length = 209
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 94/188 (50%), Gaps = 16/188 (8%)
Query: 30 LLFIFSILSWSVIIQKSVNFIT----LRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLA 85
LL SI+ I++++ F+ + +F+E + + ++ K + I L
Sbjct: 14 LLAALSIVGLGTILERTAYFMKNEQGITTEFKE---------EIVNLVRAEKENEAIALC 64
Query: 86 AIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLV 145
+++S KS R+ + + +++M ++E + +LS LG ++ +
Sbjct: 65 DKTNNSVSRTVKSILLAYRNENDLYESKEKLMKEKALEQIENLERRLSILGIVAYISPMA 124
Query: 146 GILGAVLGMMGFFQSIA--GYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDS 203
G+LG VLGM+ F++IA G NVV+ GI E+L++ GL ++IP+ IAY F +
Sbjct: 125 GLLGTVLGMIKSFKAIALQGAGDPNVVA-NGISEALLTTAAGLFIAIPAIIAYQTFSRKA 183
Query: 204 KKFAMQME 211
K +++E
Sbjct: 184 DKIMLEIE 191
>gi|294788257|ref|ZP_06753500.1| biopolymer transport protein ExbB [Simonsiella muelleri ATCC 29453]
gi|294483688|gb|EFG31372.1| biopolymer transport protein ExbB [Simonsiella muelleri ATCC 29453]
Length = 219
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/195 (21%), Positives = 93/195 (47%), Gaps = 5/195 (2%)
Query: 31 LFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMS 90
+ + SI +W +I+ + + ++R + LFW + +K + ++ + +
Sbjct: 21 MVLMSIATWFLIVYRCIQLAKIKRANHDAYDLFWKADNFTNAEMQMKTIDS-PVSKMALD 79
Query: 91 AMSEWKKSCD---KGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGI 147
A++ + + K + + D ++R + ++ + + LS L S+ S +G+
Sbjct: 80 AIASHRNYANMQQKMLSANLPKSDFLEREIRHSMTKIMHRYDAGLSVLASVGSTAPFIGL 139
Query: 148 LGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCVSIPSSIAYNKFIEDSKKF 206
LG V G+ + I+ ++ ++ G I E+L+S +GL V+IP+ +AYN +K
Sbjct: 140 LGTVWGIYHALEGISKAGQMSIAAVAGPIGEALVSTAVGLFVAIPAVLAYNYLSRKNKLL 199
Query: 207 AMQMEGFANEFSAIL 221
+ ++ FA++ L
Sbjct: 200 SRKLNDFAHDLHVYL 214
>gi|283780563|ref|YP_003371318.1| MotA/TolQ/ExbB proton channel [Pirellula staleyi DSM 6068]
gi|283439016|gb|ADB17458.1| MotA/TolQ/ExbB proton channel [Pirellula staleyi DSM 6068]
Length = 327
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 96/194 (49%), Gaps = 10/194 (5%)
Query: 31 LFIFSILSWSVIIQKSVNFITL---RRQFR-EFEQLFWSGQSLETVCKSLKNHHNIGLAA 86
L I I++ VII+++ + L + + R E L Q E + K + + A
Sbjct: 106 LLIMGIVALGVIIERTRALLMLGSRQEELRTEVRSLLEKDQIEEALAKCEETKGPV--PA 163
Query: 87 IFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVG 146
I + + ++ + G + I++++ + MD + + + L L ++SSA +VG
Sbjct: 164 ILGAGLKKYLVARRLGYDA-AKIEEQVVKGMDDYSVHVVAALEKHLPILATISSAAPMVG 222
Query: 147 ILGAVLGMMGFFQSIAGYY-SNNVVSIP--GIIESLISILLGLCVSIPSSIAYNKFIEDS 203
LG V GM+ F I + N+V GI+ SL++ +LGL V IP+ +A+N F +
Sbjct: 223 FLGTVQGMVVSFDDIVKHMGEKNIVEAAAGGIMVSLLTTVLGLIVGIPAYVAFNYFTSVT 282
Query: 204 KKFAMQMEGFANEF 217
+F +++E A+E
Sbjct: 283 NRFVLEVEESASEL 296
>gi|296445264|ref|ZP_06887223.1| MotA/TolQ/ExbB proton channel [Methylosinus trichosporium OB3b]
gi|296257219|gb|EFH04287.1| MotA/TolQ/ExbB proton channel [Methylosinus trichosporium OB3b]
Length = 626
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 92/216 (42%), Gaps = 28/216 (12%)
Query: 27 IITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAA 86
+I LL I + +SW V+I ++ + RQ + EQ S + + T SL + +A+
Sbjct: 391 VIGLLMIMAAVSWMVMIDRTS---YVNRQSKANEQFIKSFRDMATDLTSLDHGDAEDIAS 447
Query: 87 I--------------------FMSAMSEWKKSCDKGARSPIGIQDR----IDRMMDVAIA 122
I + SE P + I +D +
Sbjct: 448 IGGRVGESEAEMMRVSALYRIYHIGASEISHRFAAAGGRPTALSGASIAAIRAALDSGVV 507
Query: 123 RELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLIS 181
+E +++ + L S G +G+LG V+G+M F +IA NV +I PGI +L++
Sbjct: 508 KETQQLNRMMVVLTIAISGGPFLGLLGTVVGVMITFAAIAASGDVNVNAIAPGIAAALVA 567
Query: 182 ILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEF 217
+ GL V+IP+ YN I K ++ F +EF
Sbjct: 568 TVAGLAVAIPALFGYNYLISRIKDLTSEIHVFVDEF 603
>gi|325291602|ref|YP_004277466.1| biopolymer transport protein [Agrobacterium sp. H13-3]
gi|325059455|gb|ADY63146.1| biopolymer transport protein [Agrobacterium sp. H13-3]
Length = 387
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 97/201 (48%), Gaps = 21/201 (10%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
++S + +FM VK ++ L S+++W+V + KS+ R + ++ ++L
Sbjct: 151 NLSPWGMFMAADWVVKGVMIGLAFASLVTWTVWVAKSIELAGARVRAGATLKVIRRAKTL 210
Query: 70 ETVCKSLKNHHNIGLAAIFMS-AMSEWKKS------CDKGARSPIGIQDRIDRMM---DV 119
++++ G AA+ + A E + S D G GI++R+ + +
Sbjct: 211 NEATEAVEKKG--GPAALMLRMATHEMQLSDAVVEHTDGG-----GIKERVSSALSRIET 263
Query: 120 AIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIES 178
R + T L+ +GS + VG+ G V G+M F SI+ + N+ V PGI E+
Sbjct: 264 HAGRRMSRGTGALATIGSTAP---FVGLFGTVWGIMNSFISISESQTTNLAVVAPGIAEA 320
Query: 179 LISILLGLCVSIPSSIAYNKF 199
L++ +GL +IP+ + YN F
Sbjct: 321 LLATAIGLVAAIPAVVIYNVF 341
>gi|312114309|ref|YP_004011905.1| MotA/TolQ/ExbB proton channel [Rhodomicrobium vannielii ATCC 17100]
gi|311219438|gb|ADP70806.1| MotA/TolQ/ExbB proton channel [Rhodomicrobium vannielii ATCC 17100]
Length = 221
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 87/196 (44%), Gaps = 24/196 (12%)
Query: 9 MD-ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
MD ++I L VK ++ +L + SI W++ I+K I ++ E
Sbjct: 1 MDHLAIGDLLANADPVVKGVMAILVVASIACWTIAIEKFARLIAFSKEVAALES------ 54
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARS----PIGIQDRIDRMMDVAIAR 123
N + ++ ++ M ++ D+ RS P R+++ + A
Sbjct: 55 ---------ANPADGAPSSWLVARM---RQIVDEEPRSSGERPSEFSARLEKSLHGEAAA 102
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISI 182
+L+ + L FL ++ S VG+ G V G+M F IA ++ V PGI E+L +
Sbjct: 103 QLQRLQAGLPFLATVGSTAPFVGLFGTVWGIMRSFAGIAAAKDTSLAVVAPGIAEALFAT 162
Query: 183 LLGLCVSIPSSIAYNK 198
+GL +IP+ I YN+
Sbjct: 163 AVGLVAAIPAVIFYNQ 178
>gi|37222145|gb|AAP49338.1| ExbB [uncultured bacterium]
Length = 238
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 94/228 (41%), Gaps = 40/228 (17%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
I +++ Q +K + +L I SI SW VI+ ++ LRR + FW QS
Sbjct: 7 IASIWQQGDALIKGVAIILLIMSIASWWVIVVRAWGLWRLRRPSQGLND-FWHAQSFAEG 65
Query: 73 CKSLKNHHNI--------GLAAIFMSA-----------MSEWKKSCDKGARSPIGIQDRI 113
++L + G AA+ + ++EW +C +G+
Sbjct: 66 LRTLGEDRSTPFRHLAEEGQAALDHHSNHKDDLHGHLPLAEWLTACLRGS---------- 115
Query: 114 DRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVS 171
I E + L+ L S+ S VG+ G V G+ I +G S + V+
Sbjct: 116 -------IDESAERLQRGLAILASVGSTAPFVGLFGTVWGIYHALVGIGISGQASIDKVA 168
Query: 172 IPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
P + E+LI GL V+IP+ + YN +K ++ FA++ A
Sbjct: 169 GP-VGEALIMTAFGLAVAIPAVLGYNALTRANKGVLNKLNRFAHQLHA 215
>gi|319763204|ref|YP_004127141.1| mota/tolq/exbb proton channel [Alicycliphilus denitrificans BC]
gi|330825398|ref|YP_004388701.1| MotA/TolQ/ExbB proton channel [Alicycliphilus denitrificans K601]
gi|317117765|gb|ADV00254.1| MotA/TolQ/ExbB proton channel [Alicycliphilus denitrificans BC]
gi|329310770|gb|AEB85185.1| MotA/TolQ/ExbB proton channel [Alicycliphilus denitrificans K601]
Length = 239
Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 87/211 (41%), Gaps = 12/211 (5%)
Query: 16 LFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKS 75
+++Q + + LL S+ SW VII K+++ + ++ R+ FW +
Sbjct: 10 VWIQGDFVTRAVAVLLLGMSLASWIVIIIKALDIVRYKKHARQARD-FWHSEDFAAGLTK 68
Query: 76 LKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRID------RMMDVAIARELEEIT 129
L A F E +++ + + D +D R + I +
Sbjct: 69 L----GADPANPFRHLALEGREATAHHRNTQAHLHDSLDVSDWVTRCLRNCIDEFTARLQ 124
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCV 188
L+ L S+ S +G+ G V G+ +I + + + G I E+LI LGL V
Sbjct: 125 SGLAILASVGSTAPFIGLFGTVWGIYHALVAIGASGQSTIDKVAGPIGEALIMTALGLAV 184
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
+IP+ + YN + +K + FA++ A
Sbjct: 185 AIPAVLGYNALVRGNKSVLSSLNSFAHDLHA 215
>gi|167854591|ref|ZP_02477372.1| biopolymer transport ExbB protein [Haemophilus parasuis 29755]
gi|167854346|gb|EDS25579.1| biopolymer transport ExbB protein [Haemophilus parasuis 29755]
Length = 222
Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 103/212 (48%), Gaps = 7/212 (3%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+++ L Q + + +L + SILSW++I+ + + I +R+ ++ +L S ++L
Sbjct: 1 MNLIQLLQQQDIVLSISFGILVVMSILSWTIILIRLIKMIGIRKNNQQSFKLVKSAENLT 60
Query: 71 TVCKSLKNHHNIGLAAIFMSAMS--EWKKSCDKGARS-PIGIQDRIDRMMDVAIARELEE 127
+ ++N + +A I E ++ +K S + +D + + AI + L +
Sbjct: 61 QAEQYIQNKRS-EIADILQLTFKQCELYQAKEKNHLSHQLPFKDFLTLHLRNAITQSLRK 119
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA--GYYSNNVVSIPGIIESLISILLG 185
L L S+ + +G+ G V G+ I+ G S VS P I E+L++ +G
Sbjct: 120 YDGGLVALASIGAVAPFIGLFGTVWGIFNALMDISQQGQVSIATVSAP-IGEALVATAMG 178
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEF 217
L V+IP+ +AYN ++ + ++ +ANE
Sbjct: 179 LFVAIPAVLAYNLITRLNRNLSQDLDHYANEL 210
>gi|262278905|ref|ZP_06056690.1| MotA/TolQ/ExbB proton channel family protein [Acinetobacter
calcoaceticus RUH2202]
gi|262259256|gb|EEY77989.1| MotA/TolQ/ExbB proton channel family protein [Acinetobacter
calcoaceticus RUH2202]
Length = 211
Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 104/195 (53%), Gaps = 17/195 (8%)
Query: 31 LFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ-SLETVCKSLKNHHNIGLAAI-- 87
L + SIL+ ++ I++ F+ LRR E L G E + ++L+ + +A+
Sbjct: 15 LILCSILTVAISIER---FVRLRRSQVLPEALSGKGSLRAEDIVENLEQNVEAQSSALGH 71
Query: 88 FMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGI 147
+ A E ++ ++ AR+ M+VA ++E+ + + ++FLG++S+ L+G+
Sbjct: 72 ILKAGFEHREHGEQFARA----------QMEVAASQEISYLEKNINFLGTISAVAPLLGL 121
Query: 148 LGAVLGMMGFFQSIA-GYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKF 206
LG V+G++ F I G + + IPGI ++LI+ +G+ ++IP+ IAY F + +
Sbjct: 122 LGTVVGIIESFLVIDFGSAGSPSLMIPGISKALITTAVGMLIAIPALIAYRYFQRVVQDY 181
Query: 207 AMQMEGFANEFSAIL 221
++E + F A L
Sbjct: 182 IAELEQQSTLFHASL 196
>gi|167646068|ref|YP_001683731.1| MotA/TolQ/ExbB proton channel [Caulobacter sp. K31]
gi|167348498|gb|ABZ71233.1| MotA/TolQ/ExbB proton channel [Caulobacter sp. K31]
Length = 585
Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 63/115 (54%), Gaps = 4/115 (3%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI 172
I +MD + RE + +++ L L S G +G+LG V+G+M F +IA NV +I
Sbjct: 462 IRALMDATLVRENQRLSKSLVVLTIAISGGPFLGLLGTVVGVMITFAAIAAAGDVNVNAI 521
Query: 173 -PGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
PGI +L++ + GL V+IPS YN + +K M F +EF ++R +E
Sbjct: 522 APGISAALLATVAGLGVAIPSLFGYNYILTRNKAVQANMIVFVDEF---ITRASE 573
>gi|221202475|ref|ZP_03575506.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
multivorans CGD2M]
gi|221208068|ref|ZP_03581073.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
multivorans CGD2]
gi|221171971|gb|EEE04413.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
multivorans CGD2]
gi|221177648|gb|EEE10064.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
multivorans CGD2M]
Length = 222
Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 92/217 (42%), Gaps = 13/217 (5%)
Query: 17 FMQMGLAV-KCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKS 75
+++ G A+ + +L SI SW ++ K+ + +RQ FW SLE+ +
Sbjct: 10 YLESGDAITHAVAYVLLAMSIASWCFLLMKAWLLVRAKRQGPRALAAFWRASSLESGIAA 69
Query: 76 LKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDV--AIARELEEITEKLS 133
L +F+ P + R++R V A+ + +L
Sbjct: 70 LAGADR---ERVFVPLAE--AARDAADEHEPAALAARVERSERVLRALRHAMLRSQRRLE 124
Query: 134 F----LGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCV 188
F L S+ S VG+LG V G+ SIA + ++ G + E+LI GL V
Sbjct: 125 FGQVLLASIGSTAPFVGLLGTVWGIYHALGSIAASGQAQIENVAGPVGEALIMTAFGLVV 184
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ +AYN ++ A +++GFA + + Q
Sbjct: 185 AIPAVLAYNILGRLVRQLAEELDGFARDLHVFVCAQP 221
>gi|115525151|ref|YP_782062.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris BisA53]
gi|115519098|gb|ABJ07082.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris BisA53]
Length = 262
Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 105/197 (53%), Gaps = 17/197 (8%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ---LFWSG 66
++S + +F+ + V+ ++ L + S+ +W+V + K+V +RR+ ++ L S
Sbjct: 38 NLSPWGMFVAADMVVQTVMVGLALASLATWTVWLSKTVE---IRRETAVAKRRLALLESD 94
Query: 67 QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKS---CDKGARSPIGIQDRIDRMMDVAIAR 123
+L TV ++ A + SA+ E S D G + + + R++R+ + A+AR
Sbjct: 95 IAL-TVAEAECGDATDAAAQLIQSAVREASLSGVVPDDGFKERVAL--RLERV-EAAMAR 150
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISI 182
++ T L+ +G+++ VG+ G V G+M F I+ +S N+ V PGI E+L++
Sbjct: 151 KIAIGTGVLASIGAVAP---FVGLFGTVWGIMNAFIGISEAHSTNLAVVAPGIAEALLAT 207
Query: 183 LLGLCVSIPSSIAYNKF 199
LGL +IP+ + YN+
Sbjct: 208 ALGLVAAIPAVVIYNRL 224
>gi|329119626|ref|ZP_08248307.1| TonB family auxiliary protein ExbB [Neisseria bacilliformis ATCC
BAA-1200]
gi|327464223|gb|EGF10527.1| TonB family auxiliary protein ExbB [Neisseria bacilliformis ATCC
BAA-1200]
Length = 220
Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/221 (20%), Positives = 104/221 (47%), Gaps = 6/221 (2%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+++ +F Q + +L I S+ +W+V+I +++ + + L W+ +SL+
Sbjct: 1 MNLLHVFQQGDFVLITAFIILIIMSMATWAVMIVRAIKLRQAKAGNARVKDLIWNAKSLD 60
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSE---WKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
K + + + ++ + + A+ + ++ D S + + R + I++ +
Sbjct: 61 EAVKIARENES-PMSDMLLDAVKTDEAFHRNKDANLASGVPFGPYLMRQIQYNISQIMRR 119
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGL 186
L+ L S+ S+ +G+ G V G+ +I ++ ++ G I E+LI+ +GL
Sbjct: 120 FDGGLTALASIGSSAPFIGLFGTVWGIHKALLNIGQSGQVSIAAVAGPIGEALIATAVGL 179
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA-ILSRQTE 226
+IP+ +AYN + +K + F ++ A IL++ E
Sbjct: 180 FAAIPAVLAYNFLVRGNKTLLQDLNAFGHDLHAQILNKNGE 220
>gi|83748337|ref|ZP_00945361.1| TolQ protein [Ralstonia solanacearum UW551]
gi|207723931|ref|YP_002254329.1| biopolymer transport protein [Ralstonia solanacearum MolK2]
gi|207742832|ref|YP_002259224.1| biopolymer transport protein [Ralstonia solanacearum IPO1609]
gi|83724959|gb|EAP72113.1| TolQ protein [Ralstonia solanacearum UW551]
gi|206589138|emb|CAQ36100.1| biopolymer transport protein [Ralstonia solanacearum MolK2]
gi|206594226|emb|CAQ61153.1| biopolymer transport protein [Ralstonia solanacearum IPO1609]
Length = 243
Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 94/216 (43%), Gaps = 5/216 (2%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
+ ++ + L+ Q + + LL + S+ SW VI+ K + I L+ + E+ FW
Sbjct: 1 MQELGLSHLWTQGDIVARGTALLLLLMSLASWIVILTKVWDLIRLKSMAQGAEKRFWHSD 60
Query: 68 SLETVCKSL---KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARE 124
+ ++L K++ LA A + S + + I D I R + AI
Sbjct: 61 DFDHAMQTLGSPKDNPFYALAQTGREAAQHHRASHPQ-LHDVMDISDWITRSLKSAIDES 119
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISIL 183
+ ++ L+ L S+ S VG+ G V G+ I + + G + ESLI
Sbjct: 120 VGQMQSGLAVLASVGSTAPFVGLFGTVWGIYHALIGIGAVGVPTIDKVAGPVGESLIMTA 179
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
GL V+IP+ + YN +K ++ FA++ A
Sbjct: 180 FGLAVAIPAVLGYNALTRGNKSVIAKLNRFAHDLHA 215
>gi|187250855|ref|YP_001875337.1| biopolymer transport protein [Elusimicrobium minutum Pei191]
gi|186971015|gb|ACC98000.1| Biopolymer transport protein [Elusimicrobium minutum Pei191]
Length = 209
Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 88/195 (45%), Gaps = 10/195 (5%)
Query: 27 IITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAA 86
++ L SI+S ++I+++ F TLR+Q + +L + + K G
Sbjct: 19 VLIFLIFLSIVSLTIILER---FFTLRKQIKMSRKLIAYAKYQLQAGQIDKIIEACGRDI 75
Query: 87 IFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVG 146
+ K+ R ++D D ++D E+ + +KL L ++ S +G
Sbjct: 76 AKNTPAGRLIKTLLTSNRQGANLKDYSDEVID----WEVTLLHKKLPVLATLGSTTPFIG 131
Query: 147 ILGAVLGMMGFFQSIAGYYSNNV---VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDS 203
+ G VLG+M F +A + V GI E+LI+ GL V++P+ IAYN F
Sbjct: 132 LFGTVLGVMRAFADLAAMTAATAGPSVVAKGIAEALINTAAGLFVAVPAVIAYNYFTTQI 191
Query: 204 KKFAMQMEGFANEFS 218
F ++E A+E +
Sbjct: 192 NFFERELENIASEIT 206
>gi|160901437|ref|YP_001567019.1| MotA/TolQ/ExbB proton channel [Delftia acidovorans SPH-1]
gi|160367021|gb|ABX38634.1| MotA/TolQ/ExbB proton channel [Delftia acidovorans SPH-1]
Length = 244
Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 95/227 (41%), Gaps = 21/227 (9%)
Query: 16 LFMQMGLAV-KCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCK 74
L+ Q G AV + LL S+ SW VI+ K RR+ + FWS L T
Sbjct: 7 LWWQQGDAVARGTALLLLALSVASWVVIVWKIWFMAASRRRVPQAIAAFWSAPDLATGQA 66
Query: 75 SLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQD-----------RIDRMMDVAIAR 123
+ L A A+S+ A +P G R+ R + A+
Sbjct: 67 RMAEGDRQQLVAPMAGAVSQ--------ALAPTGSSGMALSGRAARSVRLTRGLRQALQS 118
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISI 182
++ + L ++ + VG+LG V G+ ++AG + + G + E+L+
Sbjct: 119 ASHQLQWGQTLLATVGATAPFVGLLGTVWGIHHALATLAGSGQIGIEQLAGPVGEALVMT 178
Query: 183 LLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNI 229
GL V++P+ +AYN + + +EGFA++ A+ + G +
Sbjct: 179 AAGLAVALPAVLAYNLLGRAAAQMEALLEGFAHDLQAMFGLEQPGQV 225
>gi|86156696|ref|YP_463481.1| MotA/TolQ/ExbB proton channel [Anaeromyxobacter dehalogenans 2CP-C]
gi|85773207|gb|ABC80044.1| outer membrane transport energization protein ExbB
[Anaeromyxobacter dehalogenans 2CP-C]
Length = 252
Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 96/201 (47%), Gaps = 23/201 (11%)
Query: 20 MGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS-------GQSLETV 72
MG K I +L + SI S V+ ++ V F ++ R+F G+++E +
Sbjct: 32 MGPFAKFIAGVLAVMSIYSLGVMAERLVTFARAQKASRQFAAALRDLLPAAKFGEAVE-L 90
Query: 73 CKSLKNHHNIGLAAIFMSAMSEWKKSCD----KGARSPIGIQD---RIDRMMDVAIAREL 125
+ LK H L + A+ E+ + G R +G D ++R ++ + R +
Sbjct: 91 SRKLKRGH---LPKVLGLAIEEYSHGVEALRTHGPRD-VGQFDVIAAVNRAVERSSLRTV 146
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILL 184
++ L L ++ S VG+LG V G++ FQ++A S + S+ GI E+L++
Sbjct: 147 NDLRRGLGALATVGSTAPFVGLLGTVAGIITAFQAMAATGSGGLGSVSAGIAEALVTTAF 206
Query: 185 GLCVSIPSSIAYNKF---IED 202
GL V+IP+ + +N +ED
Sbjct: 207 GLLVAIPAVMMFNYLTNRVED 227
>gi|115522985|ref|YP_779896.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris BisA53]
gi|115516932|gb|ABJ04916.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris BisA53]
Length = 264
Score = 59.3 bits (142), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 91/196 (46%), Gaps = 11/196 (5%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
++S + +F+ + V+ ++ L + S+ +W+V + K++ Q R + F
Sbjct: 40 NLSPWGMFVNADIVVQAVMVGLALASLATWTVWLSKTLELRHATDQARRRLEAF----ET 95
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRID---RMMDVAIARELE 126
ET L+ A+ S +++ G ++RI ++ A++R +
Sbjct: 96 ETTLADLERDSGDATDAVAQLIQSAAREASLSGTNWDADFKERIALRLERVEAAMSRRIA 155
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLG 185
T L+ +G+++ VG+ G V G+M F I+ + N+ V PGI E+L++ LG
Sbjct: 156 RGTGVLATIGAVAP---FVGLFGTVWGIMNAFIGISQAQTTNLAVVAPGIAEALLATALG 212
Query: 186 LCVSIPSSIAYNKFIE 201
L +IP+ + YN
Sbjct: 213 LVAAIPAVVIYNHLTR 228
>gi|194333404|ref|YP_002015264.1| MotA/TolQ/ExbB proton channel [Prosthecochloris aestuarii DSM 271]
gi|194311222|gb|ACF45617.1| MotA/TolQ/ExbB proton channel [Prosthecochloris aestuarii DSM 271]
Length = 199
Score = 59.3 bits (142), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 56/96 (58%), Gaps = 2/96 (2%)
Query: 123 RELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLI 180
RE++ + + L + +S LVGILG VLGM+ FQ++ AG +N + GI E+L+
Sbjct: 97 REIKRLNQHLDLIELISRTAPLVGILGTVLGMVTAFQNVADAGGSANPAILASGIWEALL 156
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANE 216
+ GL V+IP+ I ++ E ++ + M+ +A E
Sbjct: 157 TTAAGLSVAIPAMIVHHLLEEKTQSLSFSMKQYATE 192
>gi|325122006|gb|ADY81529.1| hypothetical protein BDGL_000943 [Acinetobacter calcoaceticus
PHEA-2]
Length = 211
Score = 59.3 bits (142), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 105/197 (53%), Gaps = 21/197 (10%)
Query: 31 LFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLET--VCKSLKNH---HNIGLA 85
L + SIL+ ++ I++ F+ LRR + + SL T + ++L+ + N LA
Sbjct: 15 LILCSILTVAISIER---FVRLRRS-QVLPKALIDDSSLRTEDIVENLEQNVEVQNSALA 70
Query: 86 AIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLV 145
I + + ++ ++ AR+ M+VA ++E+ + + ++FLG++S+ L+
Sbjct: 71 HILKAGF-DHREHGEQFARA----------QMEVAASQEISYLEKNINFLGTLSAVAPLL 119
Query: 146 GILGAVLGMMGFFQSIA-GYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSK 204
G+LG V+G++ F I G + + IPGI ++LI+ +G+ ++IP+ +AY F +
Sbjct: 120 GLLGTVVGIIESFLVIDFGSAGSPSLMIPGISKALITTAVGMLIAIPALVAYRYFQRLVQ 179
Query: 205 KFAMQMEGFANEFSAIL 221
+ ++E + F A L
Sbjct: 180 DYIAELEQQSTLFHASL 196
>gi|88607164|ref|YP_505510.1| TolQ protein [Anaplasma phagocytophilum HZ]
gi|88598227|gb|ABD43697.1| TolQ protein [Anaplasma phagocytophilum HZ]
Length = 234
Score = 59.3 bits (142), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 108/220 (49%), Gaps = 19/220 (8%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS-GQSL 69
+S F +F + + V+ ++ +L FS++SW++I +K +R+ + E +F S G +L
Sbjct: 15 VSAFDVFAEASIVVRLVMLVLLAFSLVSWAIIFKKCFVINRHKRELHDVEVVFNSRGTAL 74
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRID---RMMDVAIARELE 126
G+ I K G + + ++ + R ++ + R ++
Sbjct: 75 -------------GIREIVECGSGVVAKILQHGIKHAQQLHNKKEGFHRAINSELTRAVD 121
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI--PGIIESLISILL 184
++ E+L L ++ S+ +G+LG + ++ F++++ S + S+ P + E+L ++ L
Sbjct: 122 KLEEQLGLLSAIGSSAPYIGLLGTLWKVIESFRAVSIGESQQIASVLYPYMAEALYTLAL 181
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
GL V+IP+ + YN F K + ++ E SA ++ +
Sbjct: 182 GLLVAIPAQLFYNGFSAYVTKLSHRLGNLVYELSAFVTNE 221
>gi|197120699|ref|YP_002132650.1| MotA/TolQ/ExbB proton channel [Anaeromyxobacter sp. K]
gi|220915411|ref|YP_002490715.1| MotA/TolQ/ExbB proton channel [Anaeromyxobacter dehalogenans 2CP-1]
gi|196170548|gb|ACG71521.1| MotA/TolQ/ExbB proton channel [Anaeromyxobacter sp. K]
gi|219953265|gb|ACL63649.1| MotA/TolQ/ExbB proton channel [Anaeromyxobacter dehalogenans 2CP-1]
Length = 252
Score = 59.3 bits (142), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 96/201 (47%), Gaps = 23/201 (11%)
Query: 20 MGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS-------GQSLETV 72
MG K I +L + SI S V+ ++ V F ++ R+F G+++E +
Sbjct: 32 MGPFAKFIAGVLAVMSIYSLGVMAERLVTFARAQKASRQFAAALRDLLPAAKFGEAVE-L 90
Query: 73 CKSLKNHHNIGLAAIFMSAMSEWKKSCD----KGARSPIGIQD---RIDRMMDVAIAREL 125
+ LK H L + A+ E+ + G R +G D ++R ++ + R +
Sbjct: 91 SRKLKRGH---LPKVLGLAIEEYSHGVEALKTHGPRD-VGNFDVIAAVNRAVERSSLRTV 146
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILL 184
++ L L ++ S VG+LG V G++ FQ++A S + S+ GI E+L++
Sbjct: 147 NDLRRGLGALATVGSTAPFVGLLGTVAGIITAFQAMAATGSGGLGSVSAGIAEALVTTAF 206
Query: 185 GLCVSIPSSIAYNKF---IED 202
GL V+IP+ + +N +ED
Sbjct: 207 GLLVAIPAVMMFNYLTNRVED 227
>gi|300691123|ref|YP_003752118.1| Biopolymer transport protein [Ralstonia solanacearum PSI07]
gi|299078183|emb|CBJ50826.1| Biopolymer transport protein [Ralstonia solanacearum PSI07]
Length = 243
Score = 59.3 bits (142), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 100/236 (42%), Gaps = 15/236 (6%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
+ ++ + L+ Q + + LL + S+ SW VI+ K+ + I L+ + E+ FW
Sbjct: 1 MQELGLSHLWTQGDIVARGTALLLLLMSLASWIVILTKAWDLIRLKSMAQGAEKRFWHSD 60
Query: 68 SLETVCKSL---KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARE 124
+ ++L K++ LA A + S + + I D I R + I
Sbjct: 61 DFDHAMQTLGAPKDNPFYTLAQTGREAAQHHRASHPQ-LHDVMDISDWITRSLKSTIDES 119
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISIL 183
+ ++ L+ L S+ S VG+ G V G+ I + + G + ESLI
Sbjct: 120 VGQMQSGLAVLASVGSTAPFVGLFGTVWGIYHALIGIGAVGVPTIDKVAGPVGESLIMTA 179
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL----------SRQTEGNI 229
GL V+IP+ + YN +K ++ FA++ A +RQ + N+
Sbjct: 180 FGLAVAIPAVLGYNALTRGNKSVIAKLNRFAHDLHAYFVTGARLRPGAARQDDANV 235
>gi|326316752|ref|YP_004234424.1| MotA/TolQ/ExbB proton channel [Acidovorax avenae subsp. avenae ATCC
19860]
gi|323373588|gb|ADX45857.1| MotA/TolQ/ExbB proton channel [Acidovorax avenae subsp. avenae ATCC
19860]
Length = 238
Score = 59.3 bits (142), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/207 (21%), Positives = 87/207 (42%), Gaps = 4/207 (1%)
Query: 16 LFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKS 75
+++Q + + LL S+ SW VI+ K+++ I ++ R FW + +
Sbjct: 10 VWIQGDFVTRAVAVLLLGMSLASWIVILIKALDIIKFKKHARAARD-FWHSEDFAAGMEK 68
Query: 76 LKNHHNIGLAAIFMSA--MSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLS 133
L + + + + + ++ + + D I R + I + L+
Sbjct: 69 LGSDADNPFRHLALEGREATAHHRNTKAHLHDSLDVSDWITRSLRNCIDEFTARLQSGLA 128
Query: 134 FLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCVSIPS 192
L S+ S +G+ G V G+ +I + + + G I E+LI LGL V+IP+
Sbjct: 129 ILASVGSTAPFIGLFGTVWGIYHALVAIGTSGQSTIDKVAGPIGEALIMTALGLAVAIPA 188
Query: 193 SIAYNKFIEDSKKFAMQMEGFANEFSA 219
+ YN + +K + FA++ A
Sbjct: 189 VLGYNALVRGNKSILNGLNSFAHDLHA 215
>gi|115372382|ref|ZP_01459691.1| TolQ protein [Stigmatella aurantiaca DW4/3-1]
gi|310819523|ref|YP_003951881.1| tolq protein [Stigmatella aurantiaca DW4/3-1]
gi|115370595|gb|EAU69521.1| TolQ protein [Stigmatella aurantiaca DW4/3-1]
gi|309392595|gb|ADO70054.1| TolQ protein [Stigmatella aurantiaca DW4/3-1]
Length = 228
Score = 59.3 bits (142), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 108/229 (47%), Gaps = 18/229 (7%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
M ++ ++ GL + II L SI S V+ ++ F R R F G
Sbjct: 1 MQFTLADIWAHTGLFARFIIFTLAFMSIASLVVMAERIFVFRKTRSDSRTFAAKM--GAI 58
Query: 69 LETVCKSLKNHHNIG-----LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAR 123
L + + N+G L + S ++ +K S + ++ + R ++ R
Sbjct: 59 LAKGDLTAAANTNLGKDVGHLGRVINSGLTAYKISPSN---KDVAVES-VARALERQAQR 114
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISI 182
E++ + L L ++ S VG+LG +G++ FQ +A S + +I GI E+LI+
Sbjct: 115 EVQSLKRGLGVLATVGSTAPFVGLLGTTMGIVNAFQLMAEAGSGGLGTISAGIAEALITT 174
Query: 183 LLGLCVSIPSSIAYNKFIE---DSKKFAMQMEGFANEFSAILSRQTEGN 228
GL V+IP+ +AYN F++ D++ ++ + +NEF +++RQ G
Sbjct: 175 AFGLLVAIPAVMAYN-FLQGWVDAR--SVDISESSNEFLDVVARQLTGG 220
>gi|332186771|ref|ZP_08388513.1| motA/TolQ/ExbB proton channel family protein [Sphingomonas sp. S17]
gi|332013104|gb|EGI55167.1| motA/TolQ/ExbB proton channel family protein [Sphingomonas sp. S17]
Length = 266
Score = 59.3 bits (142), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 100/230 (43%), Gaps = 40/230 (17%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YGL + GL + + T+L + SI+S+ ++ K + Q + Q
Sbjct: 17 NPYGLG-------QALKEGGLISQSVFTILCLMSIVSFYILFSKLFEQQKIINQAKRVRQ 69
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDV-- 119
FWS SL L+ + S +K+ D G + QD+ ++ D
Sbjct: 70 SFWSSNSLREGSAKLEKN-------------SAYKQIVDDG----LAAQDQHSKLTDPVE 112
Query: 120 -------AIARELEEITEKL----SFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYS 166
++AR I KL +FL ++ + +G+ G V+G+ I +G S
Sbjct: 113 AHDWLHGSLARSEAAINSKLGGGLAFLATVGATAPFIGLFGTVIGIYRALIKIGSSGQAS 172
Query: 167 NNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANE 216
+ V+ P + E+LI LGL V++P+ +A+N +K A + F+N+
Sbjct: 173 IDAVAGP-VGEALIMTALGLVVAVPAVLAFNWLQRRNKSIAEDLSSFSND 221
>gi|317406041|gb|EFV86310.1| transporter ExbB2 [Achromobacter xylosoxidans C54]
Length = 249
Score = 59.3 bits (142), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 100/201 (49%), Gaps = 10/201 (4%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS-GQSLETVCKSL---KNHHN 81
II +L + + SW ++I+KS N + F + F GQ LE + K +
Sbjct: 30 VIIAILVLMMVQSWVIMIKKSRNVARVASANEAFRESFAKVGQRLELLADDAALAKRLEH 89
Query: 82 IGLAAIFMSAMSEWKKSCDKGARSP---IGIQDRIDRMMDVAIARELEEITEKLSFLGSM 138
L ++ A++E + ++GA + + I MD +E + + KL L +
Sbjct: 90 ASLWRLYRVAVNEIRTRREQGADTSSISAATIEAIRASMDAVRTKENQVLGAKLGSLSNA 149
Query: 139 SSAGLLVGILGAVLGMMGFF--QSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAY 196
+ G +G+LG VLG+M F ++AG + N ++ PG+ +L++ +GL V+IP+ Y
Sbjct: 150 IAGGPYIGLLGTVLGIMVVFLGTAMAGDVNINAIA-PGMAAALLATAMGLFVAIPALFGY 208
Query: 197 NKFIEDSKKFAMQMEGFANEF 217
N+ + +K+ + M F +EF
Sbjct: 209 NRLVSRNKEVSADMRVFVDEF 229
>gi|146282081|ref|YP_001172234.1| TonB system transport protein ExbB [Pseudomonas stutzeri A1501]
gi|145570286|gb|ABP79392.1| TonB system transport protein ExbB [Pseudomonas stutzeri A1501]
Length = 206
Score = 58.9 bits (141), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 84/179 (46%), Gaps = 12/179 (6%)
Query: 53 RRQFREFEQLFWSGQSLETVCKSLKNHH-------NIGLAAIFMSAMSEWKKSCDKGARS 105
RRQ + F + FW L T + + N G A+ A E ++ + A+S
Sbjct: 11 RRQNKHFLKAFWGAPDLLTAAEHASQYPGPMARIANRGFLAM---APDETPRNTLQLAQS 67
Query: 106 PIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYY 165
I +R++R + I +E + L+ L S+ S +G+ G V G+M I
Sbjct: 68 -IDRGNRVERNLRQQILKERRALEAGLAVLASIGSTSPFIGLFGTVWGIMDALTMIGVTG 126
Query: 166 SNNVVSIPGII-ESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
+ + ++ G I +LI+ +G+ V++P+ + YN F+ K M+ FA++F ++ R
Sbjct: 127 NAGLDTVAGPIGHALIATGVGIAVAVPAVLIYNFFLRRLKLAGAHMDDFAHDFDSLAQR 185
>gi|115350601|ref|YP_772440.1| MotA/TolQ/ExbB proton channel [Burkholderia ambifaria AMMD]
gi|170704110|ref|ZP_02894729.1| MotA/TolQ/ExbB proton channel [Burkholderia ambifaria IOP40-10]
gi|172059634|ref|YP_001807286.1| MotA/TolQ/ExbB proton channel [Burkholderia ambifaria MC40-6]
gi|115280589|gb|ABI86106.1| MotA/TolQ/ExbB proton channel [Burkholderia ambifaria AMMD]
gi|170130983|gb|EDS99691.1| MotA/TolQ/ExbB proton channel [Burkholderia ambifaria IOP40-10]
gi|171992151|gb|ACB63070.1| MotA/TolQ/ExbB proton channel [Burkholderia ambifaria MC40-6]
Length = 222
Score = 58.9 bits (141), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 91/211 (43%), Gaps = 3/211 (1%)
Query: 17 FMQMGLAV-KCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKS 75
+++ G A+ + +L S+ SW ++ K+ + +RQ FW SL+ +
Sbjct: 10 YLESGDAITHAVAYVLLAMSVASWCFLLMKAWLLVRAKRQGPRALAAFWRAASLDAGIDA 69
Query: 76 LKNHHNIGLAAIFMSAMSEWKKSCDKGA-RSPIGIQDRIDRMMDVAIARELEEITEKLSF 134
L + A + D A + + +R+ R + A+ R +
Sbjct: 70 LAGADRERVFVPLAEAARDAADEHDPAALAARVERSERVLRALRHAMLRSQRRLEFGQVL 129
Query: 135 LGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCVSIPSS 193
L S+ S VG+LG V G+ SIA + ++ G + E+LI GL V+IP+
Sbjct: 130 LASIGSTAPFVGLLGTVWGIYHALGSIAASGQAQIENVAGPVGEALIMTAFGLVVAIPAV 189
Query: 194 IAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+AYN ++ A +++GFA + + Q
Sbjct: 190 LAYNILGRLVRQLAEELDGFARDLHVFVCAQ 220
>gi|90424416|ref|YP_532786.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris BisB18]
gi|90106430|gb|ABD88467.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris BisB18]
Length = 680
Score = 58.9 bits (141), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 63/121 (52%), Gaps = 4/121 (3%)
Query: 101 KGARSPIGIQDRIDRM---MDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGF 157
G R+PI I + +D +E++++ + L S G +G+LG V+G+M
Sbjct: 535 NGTRAPILSATSIAAIRATLDSGYVKEMQKLNRLMVVLTIAISGGPFLGLLGTVVGVMIT 594
Query: 158 FQSIAGYYSNNVVSI-PGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANE 216
F +IA NV +I PGI +L++ + GL V+IP+ AYN I K M+ F +E
Sbjct: 595 FAAIAASGDVNVNAIAPGIAAALVATVAGLGVAIPALFAYNYLISRIKDLTTDMQVFVDE 654
Query: 217 F 217
F
Sbjct: 655 F 655
>gi|293608262|ref|ZP_06690565.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292828835|gb|EFF87197.1| conserved hypothetical protein [Acinetobacter sp. SH024]
Length = 211
Score = 58.9 bits (141), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 104/197 (52%), Gaps = 21/197 (10%)
Query: 31 LFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLET--VCKSLKNH---HNIGLA 85
L + SIL+ ++ I++ F+ LRR + + SL T + ++L+ + N LA
Sbjct: 15 LILCSILTVAISIER---FVRLRRS-QVLPKALIDDSSLRTEDIVENLEQNVEVQNSALA 70
Query: 86 AIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLV 145
I + + ++ ++ AR+ M+VA ++E+ + + ++FLG++S+ L+
Sbjct: 71 HILKAGF-DHREHGEQFARA----------QMEVAASQEISYLEKNINFLGTLSAVAPLL 119
Query: 146 GILGAVLGMMGFFQSIA-GYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSK 204
G+LG V+G++ F I G + + IPGI ++LI+ +G+ ++IP+ +AY F +
Sbjct: 120 GLLGTVVGIIESFLVIDFGSAGSPSLMIPGISKALITTAVGMLIAIPALVAYRYFQRLVQ 179
Query: 205 KFAMQMEGFANEFSAIL 221
+ +E + F A L
Sbjct: 180 DYITDLEQQSTLFHASL 196
>gi|39935196|ref|NP_947472.1| putative enterochelin uptake protein ExbB [Rhodopseudomonas
palustris CGA009]
gi|39649047|emb|CAE27568.1| putative exbB, uptake of enterochelin; tonB-dependent uptake of B
colicins [Rhodopseudomonas palustris CGA009]
Length = 265
Score = 58.9 bits (141), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 99/220 (45%), Gaps = 13/220 (5%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQF----REFEQLFWS 65
D+S + +F+ V+ ++ L + S+ +W+V + KS I LRR R E+L S
Sbjct: 42 DLSPWGMFLGADAVVRTVMVGLALASLAAWTVWLAKS---IELRRSVAVAQRGLERLE-S 97
Query: 66 GQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
+L+ + H+ A M + + S GA G ++R+ ++ A E
Sbjct: 98 DVTLQQAAAETADQHD---AVAQMIQTVDREASLSGGAHDD-GFRERVALRLERVEAAEA 153
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILL 184
L S+ + VG+ G V G+M F I+ + N+ V PGI E+L++ L
Sbjct: 154 RRAAIGTGLLASIGAVAPFVGLFGTVWGIMNAFIGISKANTTNLAVVAPGIAEALLATAL 213
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
GL +IP+ + YN + + + + ++SR+
Sbjct: 214 GLVAAIPAVVIYNHLTRRVTAYRALLGDASTQLLLMISRE 253
>gi|310816632|ref|YP_003964596.1| ExbB family protein [Ketogulonicigenium vulgare Y25]
gi|308755367|gb|ADO43296.1| ExbB family protein [Ketogulonicigenium vulgare Y25]
Length = 291
Score = 58.9 bits (141), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 93/197 (47%), Gaps = 13/197 (6%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S +FM VK ++ L + ++ + + K++ RR+ R +L + L
Sbjct: 63 DLSPVGMFMAADWVVKGVMIGLALATVTVLVLWLGKTLELWGARRRARNGLKLLAASTRL 122
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSC---DKGARSPIGIQDRID---RMMDVAIAR 123
E + + +A + +A E + S D G++DRI + + R
Sbjct: 123 EDAIIAFQGERG-AIALMVRAAEDEARLSLGALDYAGSD--GMKDRIASRLQRLSAGAGR 179
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISI 182
L+ T L+ +G+++ VG+ G V G+M F SIA + N+ V PGI E+L++
Sbjct: 180 RLQRGTGILATVGAVAP---FVGLFGTVWGIMNSFVSIAETQTTNLAVVAPGIAEALLAT 236
Query: 183 LLGLCVSIPSSIAYNKF 199
+GL +IP+ + YN F
Sbjct: 237 AIGLVAAIPAVVIYNGF 253
>gi|319639111|ref|ZP_07993868.1| biopolymer transporter exbB [Neisseria mucosa C102]
gi|317399689|gb|EFV80353.1| biopolymer transporter exbB [Neisseria mucosa C102]
Length = 219
Score = 58.9 bits (141), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/221 (19%), Positives = 107/221 (48%), Gaps = 5/221 (2%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
MD+S+ +F + + + L+ + S+++WSVI+ + + + ++ + ++L + +
Sbjct: 1 MDLSL--VFKSGDVVLIGVFVLMLLMSVVTWSVIVIRCIKYCKAKKGNTQVKELMLNAFT 58
Query: 69 LETVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
L + K +A + A ++++ K + + + + + ++++ +
Sbjct: 59 LADAVQKAKAVEAPMSRVADESLRAYQNYRQTTSKSLIDELPLNEYLVVHIRNSMSQTMR 118
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLG 185
+ ++ L S+ + +G+LG V G+ I+ ++ ++ G I E+L+S +G
Sbjct: 119 QFDYGMTALASIGATAPFIGLLGTVWGIYHALIGISESGQMSIAAVAGPIGEALVSTAVG 178
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
L V+IP+ +AYN +K A M+ FA++ L Q +
Sbjct: 179 LFVAIPAVLAYNFLNRGTKTIAQDMDAFAHDLHVRLLNQKD 219
>gi|90422455|ref|YP_530825.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris BisB18]
gi|90104469|gb|ABD86506.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris BisB18]
Length = 283
Score = 58.9 bits (141), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 99/197 (50%), Gaps = 17/197 (8%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ---LFWSG 66
++S + +F + VK ++ L + S+ +W+V + K++ LRR+ Q L S
Sbjct: 59 NLSPWGMFQNADIVVKVVMVGLALASLATWTVWLSKTLE---LRRETERALQRLALLESD 115
Query: 67 QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSC---DKGARSPIGIQDRIDRMMDVAIAR 123
L + + + N +A + +SA E S D + + + R++R+ + A++R
Sbjct: 116 TPLRDIEQDCTDA-NDAVAQLILSASREASLSGGVFDDAFKERVAL--RLERV-EGAMSR 171
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISI 182
+ T L+ +G+ S +G+ G V G+M F I+ ++ N+ V PGI E+L++
Sbjct: 172 RIARGTGILATIGATSP---FIGLFGTVWGIMNAFIGISQAHTTNLAVVAPGIAEALLAT 228
Query: 183 LLGLCVSIPSSIAYNKF 199
LGL +IP+ + YN
Sbjct: 229 ALGLVAAIPAVVIYNHL 245
>gi|225075999|ref|ZP_03719198.1| hypothetical protein NEIFLAOT_01026 [Neisseria flavescens
NRL30031/H210]
gi|224952714|gb|EEG33923.1| hypothetical protein NEIFLAOT_01026 [Neisseria flavescens
NRL30031/H210]
Length = 219
Score = 58.9 bits (141), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/221 (19%), Positives = 106/221 (47%), Gaps = 5/221 (2%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
MD+S+ +F + + + L+ + S+++WSVI+ + + + ++ + ++L + +
Sbjct: 1 MDLSL--VFKSGDVVLIGVFVLMLLMSVVTWSVIVIRCIKYRKAKKGNAQVKELMLNAFT 58
Query: 69 LETVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
L + K +A + A ++++ K + + + + + ++ + +
Sbjct: 59 LADAVQKAKAVEAPMSNVADESLRAYQNYRQTTSKSLIDELPLNEYLVVHIRNSLTQTMR 118
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLG 185
+ ++ L S+ + +G+LG V G+ I+ ++ ++ G I E+L+S +G
Sbjct: 119 QFDYGMTALASIGATAPFIGLLGTVWGIYHALIGISESGQMSIAAVAGPIGEALVSTAVG 178
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
L V+IP+ +AYN +K A M+ FA++ L Q +
Sbjct: 179 LFVAIPAVLAYNFLNRGTKTIAQDMDAFAHDLHVRLLNQKD 219
>gi|330951998|gb|EGH52258.1| TonB system transport protein ExbB2 [Pseudomonas syringae Cit 7]
Length = 141
Score = 58.9 bits (141), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 62/130 (47%), Gaps = 6/130 (4%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHH----N 81
+I LL IFS+ +W + + K V F L+ Q R+F + FW+ SL++ + +
Sbjct: 14 AVIWLLVIFSVATWGLALLKGVQFSRLKSQDRKFHKQFWAASSLDSAAQLAQEQPGAAAR 73
Query: 82 IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSA 141
+ LA + + ++ D I QDR++R + I RE + L+ L S+ S
Sbjct: 74 VALAGYAAIQVPDGAQANDLS--QSINHQDRLERALRQQIVRERRSLETGLAILASIGST 131
Query: 142 GLLVGILGAV 151
+G+ G V
Sbjct: 132 SPFIGLFGTV 141
>gi|161525903|ref|YP_001580915.1| MotA/TolQ/ExbB proton channel [Burkholderia multivorans ATCC 17616]
gi|189349378|ref|YP_001945006.1| biopolymer transport protein [Burkholderia multivorans ATCC 17616]
gi|221213182|ref|ZP_03586157.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
multivorans CGD1]
gi|160343332|gb|ABX16418.1| MotA/TolQ/ExbB proton channel [Burkholderia multivorans ATCC 17616]
gi|189333400|dbj|BAG42470.1| biopolymer transport protein [Burkholderia multivorans ATCC 17616]
gi|221166634|gb|EED99105.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
multivorans CGD1]
Length = 222
Score = 58.9 bits (141), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 91/217 (41%), Gaps = 13/217 (5%)
Query: 17 FMQMGLAV-KCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKS 75
+++ G A+ + +L S+ SW ++ K+ + +RQ FW SLE +
Sbjct: 10 YLESGDAITHAVAYVLLAMSVASWCFLLMKAWLLVRAKRQGPRALAAFWRASSLEAGIAA 69
Query: 76 LKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDV--AIARELEEITEKLS 133
L +F+ P + R++R V A+ + +L
Sbjct: 70 LAGADR---ERVFVPLAE--AARDAADEHEPAALAARVERSERVLRALRHAMLRSQRRLE 124
Query: 134 F----LGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCV 188
F L S+ S VG+LG V G+ SIA + ++ G + E+LI GL V
Sbjct: 125 FGQVLLASIGSTAPFVGLLGTVWGIYHALGSIAASGQAQIENVAGPVGEALIMTAFGLVV 184
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ +AYN ++ A +++GFA + + Q
Sbjct: 185 AIPAVLAYNILGRLVRQLAEELDGFARDLHVFVCAQP 221
>gi|108761427|ref|YP_634605.1| MotA/TolQ/ExbB proton channel family protein [Myxococcus xanthus DK
1622]
gi|108465307|gb|ABF90492.1| MotA/TolQ/ExbB proton channel family protein [Myxococcus xanthus DK
1622]
Length = 240
Score = 58.9 bits (141), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 93/181 (51%), Gaps = 22/181 (12%)
Query: 27 IITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAA 86
++ +L I S+LS +++++++V F R E + + + K+++ + AA
Sbjct: 33 VLWVLVILSVLSIAIMLERTVYFARHRLPDSEALAVRLARGEYDVARKAIEGKTGME-AA 91
Query: 87 IFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVG 146
I A++ S D+GA D +++++ ++RE + LS+LG++ + +G
Sbjct: 92 IIREALA----SADQGA-------DTVEQVIASTLSRERPQYERFLSYLGTLGNNAPFIG 140
Query: 147 ILGAVLGMMGFF--------QSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNK 198
+ G VLG++ F Q G V++ GI E+L++ +GL V+IP+ +A+N
Sbjct: 141 LFGTVLGIIKAFNDLGKMNAQGGGGAMQQTVMA--GISEALVATAVGLAVAIPAVVAFNV 198
Query: 199 F 199
F
Sbjct: 199 F 199
>gi|227114381|ref|ZP_03828037.1| biopolymer transport protein [Pectobacterium carotovorum subsp.
brasiliensis PBR1692]
Length = 246
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 92/214 (42%), Gaps = 3/214 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL- 69
+ I + Q + + +L I S+LSW+V++ K+ + L + + FW SL
Sbjct: 4 LDIHHFWQQGDVVTHSVAIILLIMSLLSWTVMLLKARQLLALNKSVQYSRNTFWQATSLQ 63
Query: 70 ETVCKSLKNHHN-IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
E+V K K N I A+ + + + D + R + + ++
Sbjct: 64 ESVEKFGKQRFNPFRDLVIEGHALLKHPHKFSSTLGGHVDLSDWLVRGLSNTLDTNSGKL 123
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLC 187
L L S+ S +G+LG V G+ Q+I+ ++ + G + E+LI GL
Sbjct: 124 QSGLGTLASIGSTAPFIGLLGTVWGIFHALQTISTIGQPDLAQVAGPVGEALIMTAFGLF 183
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
V+IP+ + +N ++ M FA++ A L
Sbjct: 184 VAIPAVLGFNAINRRNRIVLHAMNRFAHDLHAYL 217
>gi|220934041|ref|YP_002512940.1| MotA/TolQ/ExbB proton channel [Thioalkalivibrio sp. HL-EbGR7]
gi|219995351|gb|ACL71953.1| MotA/TolQ/ExbB proton channel [Thioalkalivibrio sp. HL-EbGR7]
Length = 240
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 103/222 (46%), Gaps = 15/222 (6%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
MDI + +F Q + + +L + S+ +W++I ++V + +RR R F+Q FW +
Sbjct: 1 MDIGL--VFEQGDWVLIGVFLILLLMSVATWALIFGRTVTALRIRRDNRAFQQAFWDARG 58
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRID------RMMDVAIA 122
+ + LAAI + + K +R P + D R + A+
Sbjct: 59 -DAQALARAEQSGSPLAAIARAGIRGLKHYR---SRDPQRLGDACSSDEFLVRTIRNALG 114
Query: 123 RELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLI 180
RE L+ L S+ S VG+ G V G+ I AG S VV+ P + E+L+
Sbjct: 115 REQARQQSGLTVLASVGSTAPFVGLFGTVWGIYHALMDIAAAGNASMEVVAGP-LGEALV 173
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
+ GL +IP+ +AYN ++ A +M+ FA++ A L+
Sbjct: 174 ATAAGLAAAIPAVLAYNASHRFNRSLAQEMDAFAHDLHAYLT 215
>gi|316934721|ref|YP_004109703.1| tonB-system energizer ExbB [Rhodopseudomonas palustris DX-1]
gi|315602435|gb|ADU44970.1| tonB-system energizer ExbB [Rhodopseudomonas palustris DX-1]
Length = 266
Score = 58.5 bits (140), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 85/196 (43%), Gaps = 11/196 (5%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQF---REFEQLFWSG 66
D+S + +F+ VK ++ L S+ +W+V + KS I LRR R S
Sbjct: 43 DLSPWGMFVNADAVVKTVMVGLAAASLAAWTVWLAKS---IELRRSVALARAGLDRLESD 99
Query: 67 QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
+L+ + H+ A M E + S G G +DR+ ++ A E
Sbjct: 100 TTLQQAAADTADQHD---AVAQMIHTVEREASLSGGVHDD-GFRDRVALRLERVEAAEAR 155
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLG 185
L S+ + VG+ G V G+M F I+ + N+ V PGI E+L++ LG
Sbjct: 156 RAAIGTGLLASIGAVAPFVGLFGTVWGIMNAFIGISKANTTNLAVVAPGIAEALLATALG 215
Query: 186 LCVSIPSSIAYNKFIE 201
L +IP+ + YN
Sbjct: 216 LVAAIPAVVIYNHLTR 231
>gi|239813428|ref|YP_002942338.1| MotA/TolQ/ExbB proton channel [Variovorax paradoxus S110]
gi|239800005|gb|ACS17072.1| MotA/TolQ/ExbB proton channel [Variovorax paradoxus S110]
Length = 235
Score = 58.5 bits (140), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 90/218 (41%), Gaps = 17/218 (7%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+S+ L Q + + LL SI SW VI+ K+ R FW +L
Sbjct: 1 MSVLELLTQGDGVSRSVAALLLAMSIASWVVILWKAWLLRGGTRDVLRSIAAFWQSATLA 60
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKK--------SCDKGARSPIGIQDRIDRMMDVAIA 122
+ L+ L +SA+ G R+ R+ R + A+
Sbjct: 61 DAQQRLQAFDRAMLVGPAVSAIRNAAATDAGDATLGATTGDRN-----QRLTRALRGALH 115
Query: 123 RELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGY---YSNNVVSIPGIIESL 179
L + L ++ + VG+LG V G+ G IAG ++ + V+ P + E+L
Sbjct: 116 GALRRLQSGQILLATVGATAPFVGLLGTVWGIYGALSGIAGQTGGFTIDKVAGP-VGEAL 174
Query: 180 ISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEF 217
+ GL V+IP+ +AYN F + ++EGFA++
Sbjct: 175 VMTAFGLAVAIPAVLAYNVFGRVIGRIEAELEGFAHDL 212
>gi|188583835|ref|YP_001927280.1| tonB-system energizer ExbB [Methylobacterium populi BJ001]
gi|179347333|gb|ACB82745.1| tonB-system energizer ExbB [Methylobacterium populi BJ001]
Length = 335
Score = 58.5 bits (140), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 90/198 (45%), Gaps = 9/198 (4%)
Query: 7 AIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFR-EFEQLFWS 65
A D+S +F+ VK ++ +L S+++W++++ K + +R+ R +L +
Sbjct: 103 AAHDLSPMGMFLAADPVVKAVMIILAAASVVTWTILLVKMFSLGLAKRRMRLSLNELRSA 162
Query: 66 GQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
G E + +G + + G S G+++R ++ AR
Sbjct: 163 GNLAEA---GQRVRRGVGALLLVEAEEE---LGLSHGLPS-EGVKERAAIALNRVEARVG 215
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILL 184
+ + L ++ S G VG+ G V G+MG F IA + N+ V PGI E+L++ +
Sbjct: 216 KRMASGTGILATIGSIGPFVGLFGTVWGIMGSFIGIASSNTTNLAVVAPGIAEALLATGI 275
Query: 185 GLCVSIPSSIAYNKFIED 202
GL +IP+ + YN
Sbjct: 276 GLVAAIPAVVIYNALTRS 293
>gi|330881261|gb|EGH15410.1| biopolymer transport protein ExbB [Pseudomonas syringae pv.
glycinea str. race 4]
Length = 160
Score = 58.5 bits (140), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 70/134 (52%), Gaps = 2/134 (1%)
Query: 91 AMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGA 150
A+ E ++ + A + I DR++R + I +E + + L S+ S +G+ G
Sbjct: 6 AVDESPRTTQQLAHT-INRSDRLERNLRQQIQKERRALESGQAILASIGSTAPFIGLFGT 64
Query: 151 VLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQ 209
V G+M QSI S ++ ++ G I +L++ +G+ V++P+ + YN F+ K
Sbjct: 65 VWGIMEALQSIGVTGSASLEAVAGPIGHALVATGVGIAVAVPAVLIYNFFLRRLKLAVAD 124
Query: 210 MEGFANEFSAILSR 223
M+ FA++F A+ R
Sbjct: 125 MDDFAHDFDALAQR 138
>gi|170734612|ref|YP_001773726.1| MotA/TolQ/ExbB proton channel [Burkholderia cenocepacia MC0-3]
gi|169820650|gb|ACA95231.1| MotA/TolQ/ExbB proton channel [Burkholderia cenocepacia MC0-3]
Length = 246
Score = 58.5 bits (140), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 97/220 (44%), Gaps = 12/220 (5%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
M YG+A ++ Q + I L S++SW VI+ K L + +
Sbjct: 1 MEQYGIA-------NVWQQGDFVTRFIFVFLIGMSVVSWFVILTKGFANRRLESLGKRAQ 53
Query: 61 QLFWSGQSLETVCKSLKNHHNIGLAAIFMSA--MSEWKKSCDKGARSPIGIQDRIDRMMD 118
FWS S+ +L + A+ ++ +E + + + + + R +
Sbjct: 54 TGFWSSASISDGIAALGERGDNPYRALVLAGREANEQHAGNEPSMQGSLSASEWVARGLR 113
Query: 119 VAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGII 176
A E+ + L+ LGS+ S VG+ G V G+ +I +G S + V+ P +
Sbjct: 114 NAFDDEVARLQNGLAVLGSIGSTAPFVGLFGTVWGIYHALMAIGMSGQASLDHVAGP-VG 172
Query: 177 ESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANE 216
ESL+ +GL V+IP+ + +N +K+ + ++ FA+E
Sbjct: 173 ESLVMTAIGLFVAIPAVLGFNYVNRGNKRVSHRLNRFAHE 212
>gi|227328309|ref|ZP_03832333.1| biopolymer transport protein [Pectobacterium carotovorum subsp.
carotovorum WPP14]
Length = 246
Score = 58.5 bits (140), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 91/214 (42%), Gaps = 3/214 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL- 69
+ I + Q L + +L I S+LSW+V++ K+ L + + FW SL
Sbjct: 4 LDIHHFWQQGDLVTHSVAIILLIMSLLSWTVMLLKARQLFALNKSVQYSRNTFWQATSLQ 63
Query: 70 ETVCKSLKNHHN-IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
E+V K + N I A+ + + + D + R + + ++
Sbjct: 64 ESVEKFGRQRFNPFRDLVIEGHALLKHPHKFSSTLGGHVDLSDWLVRGLSNTLDTNSGKL 123
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLC 187
L L S+ S +G+LG V G+ Q+I+ ++ + G + E+LI GL
Sbjct: 124 QSGLGTLASIGSTAPFIGLLGTVWGIFHALQTISTIGQPDLAQVAGPVGEALIMTAFGLF 183
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
V+IP+ + +N ++ M FA++ A L
Sbjct: 184 VAIPAVLGFNAINRRNRIVLHAMNRFAHDLHAYL 217
>gi|39934424|ref|NP_946700.1| putative transport protein ExbB2 [Rhodopseudomonas palustris
CGA009]
gi|39648273|emb|CAE26793.1| putative transport protein ExbB2 [Rhodopseudomonas palustris
CGA009]
Length = 675
Score = 58.5 bits (140), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 92/205 (44%), Gaps = 28/205 (13%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQL---------------FWSGQSLE 70
+I +L + +++SW V++ ++ LRRQ R + + S + +
Sbjct: 441 VVIAILMVMAVISWMVMVDRAS---YLRRQARANARFIACYNAVDFDLRLLSYGSPEDVA 497
Query: 71 TVCKSLKNH-----HNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRM---MDVAIA 122
T+ L N + L I+ A E ++ +G P+ + I M +D +
Sbjct: 498 TLGGRLNNKDAALMRSSSLYRIYHIAADEIRRRSHQGGL-PVLTSNSIAAMRAALDGGVV 556
Query: 123 RELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLIS 181
RE + + + L S G +G+LG V+G+M F +IA NV +I PGI +L++
Sbjct: 557 RESQRLNRLMVMLTIAISGGPFLGLLGTVVGVMITFAAIAASGDVNVNAIAPGIAAALVA 616
Query: 182 ILLGLCVSIPSSIAYNKFIEDSKKF 206
+ GL V+IP+ YN I K
Sbjct: 617 TVAGLGVAIPALFGYNYLISQIKNL 641
>gi|319407712|emb|CBI81360.1| Biopolymer transport exbB protein [Bartonella sp. 1-1C]
Length = 274
Score = 58.5 bits (140), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 104/242 (42%), Gaps = 22/242 (9%)
Query: 5 GLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFW 64
L + D S F++FM V+ +I L + S+LSW++ K V F + + R QL
Sbjct: 14 ALPMHDFSPFSMFMAADWVVQAVIIALLLASLLSWTIAFFKIVEFTVAKYKARRVFQLTN 73
Query: 65 SGQSLETVCKSLKN------------HHNIGLAAIFMSAMSEWKKSCDKGARSPI----- 107
Q+ + S + I L++ + M ++G P
Sbjct: 74 DAQTFAELIASFQKIKGTSVFFLEEVLKEIRLSSQQLCLMKSKDLHQNQGEVFPYDILSC 133
Query: 108 ----GIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAG 163
G+++R+ ++ ++ + I + L ++ S VG+ V G+M F IA
Sbjct: 134 GNIDGVKERVHSLLSRSLFAAMRRIACGSAVLATIGSVAPFVGLFATVWGIMNAFIGIAK 193
Query: 164 YYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
+ + V PGI E+L++ +GL V+IP+ I YN FI + + A ++S
Sbjct: 194 SQTTRLDVVAPGIAEALLATAIGLFVAIPAVILYNGFIRFLNGYRNDLADIAAAIERLIS 253
Query: 223 RQ 224
R+
Sbjct: 254 RE 255
>gi|301631723|ref|XP_002944946.1| PREDICTED: biopolymer transport protein exbB-like [Xenopus
(Silurana) tropicalis]
Length = 212
Score = 58.5 bits (140), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 81/188 (43%), Gaps = 4/188 (2%)
Query: 35 SILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSA--M 92
S+ SW VI+ K+++ + ++Q R Q FW + T L + + +
Sbjct: 2 SLASWIVILIKALDIMKFKKQARR-AQDFWHSEDFATGLAKLDTDPSNPFRHLALEGREA 60
Query: 93 SEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVL 152
+ ++ + I D + R + I + L+ L S+ S +G+ G V
Sbjct: 61 TAHHRNTKGHLHDALDISDWVTRCLRNCIDEFTARLQSGLAILASVGSTAPFIGLFGTVW 120
Query: 153 GMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
G+ +I + + + G I E+LI LGL V+IP+ + YN + +K ++
Sbjct: 121 GIYHALVAIGTSGQSTIDKVAGPIGEALIMTALGLAVAIPAVLGYNALVRGNKSILNRLN 180
Query: 212 GFANEFSA 219
FA++ A
Sbjct: 181 SFAHDMHA 188
>gi|241766457|ref|ZP_04764329.1| MotA/TolQ/ExbB proton channel [Acidovorax delafieldii 2AN]
gi|241363354|gb|EER58874.1| MotA/TolQ/ExbB proton channel [Acidovorax delafieldii 2AN]
Length = 239
Score = 58.2 bits (139), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/207 (21%), Positives = 85/207 (41%), Gaps = 4/207 (1%)
Query: 16 LFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKS 75
+++Q + + LL S+ SW VI+ K+++ + ++ R Q FW +
Sbjct: 10 VWIQGDFVTRAVAILLLGMSLASWIVILIKALDIVKFKKHARA-AQDFWHSEDFAAGLTK 68
Query: 76 LKNHHNIGLAAIFMSA--MSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLS 133
L + + + ++ + + D + R + I I L+
Sbjct: 69 LGADPTNPFRHLALEGREATAHHRNTKAHLHDSLDVSDWVTRCLRNCIDEFTARIQSGLA 128
Query: 134 FLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCVSIPS 192
L S+ S +G+ G V G+ +I + + + G I E+LI LGL V+IP+
Sbjct: 129 ILASVGSTAPFIGLFGTVWGIYHALLAIGTSGQSTIDKVAGPIGEALIMTALGLAVAIPA 188
Query: 193 SIAYNKFIEDSKKFAMQMEGFANEFSA 219
+ YN + +K + FA++ A
Sbjct: 189 VLGYNALVRGNKSILNGLNSFAHDLHA 215
>gi|241760806|ref|ZP_04758897.1| transporter, MotA/TolQ/ExbB proton channel family [Neisseria
flavescens SK114]
gi|261379269|ref|ZP_05983842.1| TonB system transport protein ExbB [Neisseria subflava NJ9703]
gi|241318703|gb|EER55255.1| transporter, MotA/TolQ/ExbB proton channel family [Neisseria
flavescens SK114]
gi|284797701|gb|EFC53048.1| TonB system transport protein ExbB [Neisseria subflava NJ9703]
Length = 219
Score = 58.2 bits (139), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/221 (19%), Positives = 106/221 (47%), Gaps = 5/221 (2%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
MD+S+ +F + + + L+ + S+++WSVI+ + + + ++ + ++L + +
Sbjct: 1 MDLSL--VFKSGDVVLIGVFVLMLLMSVVTWSVIVIRCIKYRKAKKGNAQVKELMLNAFT 58
Query: 69 LETVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
L + K +A + A ++++ K + + + + + ++ + +
Sbjct: 59 LADAVQKAKAVEAPMSRVADESLRAYQNYRQTTSKSLIDELPLNEYLVVHIRNSLTQTMR 118
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLG 185
+ ++ L S+ + +G+LG V G+ I+ ++ ++ G I E+L+S +G
Sbjct: 119 QFDYGMTALASIGATAPFIGLLGTVWGIYHALIGISESGQMSIAAVAGPIGEALVSTAVG 178
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
L V+IP+ +AYN +K A M+ FA++ L Q +
Sbjct: 179 LFVAIPAVLAYNFLNRGTKTIAQDMDAFAHDLHVRLLNQKD 219
>gi|46447481|ref|YP_008846.1| putative TolQ protein [Candidatus Protochlamydia amoebophila UWE25]
gi|46401122|emb|CAF24571.1| putative TolQ protein [Candidatus Protochlamydia amoebophila UWE25]
Length = 250
Score = 58.2 bits (139), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 105/244 (43%), Gaps = 46/244 (18%)
Query: 14 FALFMQMGLAVKCIITLLFIFSILSWSVIIQK--------------------------SV 47
F + Q + K I L+I SI SW V+I K S+
Sbjct: 14 FEAYSQSDVLGKLIFLALYILSICSWIVLIHKLWLTSQAKKYAFRFHEAFQLQKANPLSL 73
Query: 48 NFITL--RRQFREFEQLF--WSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGA 103
++ T+ + F L+ Q+L+ + K N H F + +S +S +
Sbjct: 74 DYDTINNKTHLNPFLDLYKVLKRQTLDVLAK---NRH-------FHTQLSNTPQSPTFLS 123
Query: 104 RSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAG 163
S I D + + +A +++ + + L L + S +G+LG V G++ F +
Sbjct: 124 LSDI---DYVASHLSTQVASQIKYLEKNLYVLSTTVSLAPFLGLLGTVWGILTTFAELQS 180
Query: 164 YYS---NNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAI 220
+ S + + + G+ +L + +LGL +IP+ I YN + + F+M MEGF+N+ A
Sbjct: 181 HQSGGSTHQMVLSGLSLALATTVLGLLDAIPALIGYNYLKNEIRDFSMDMEGFSNDILAA 240
Query: 221 LSRQ 224
+ Q
Sbjct: 241 VELQ 244
>gi|50120210|ref|YP_049377.1| biopolymer transport protein [Pectobacterium atrosepticum SCRI1043]
gi|49610736|emb|CAG74181.1| biopolymer transport protein [Pectobacterium atrosepticum SCRI1043]
Length = 258
Score = 58.2 bits (139), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 91/214 (42%), Gaps = 3/214 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL- 69
+ I + Q + + +L I S+LSW+V++ K+ L + + FW SL
Sbjct: 4 LDIHHFWQQGDVVTHSVAIILLIMSLLSWTVMLLKARQLFALNKSVQYSRNTFWQATSLQ 63
Query: 70 ETVCKSLKNHHN-IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
E+V K K N I A+ + + + D + R + + ++
Sbjct: 64 ESVEKFGKQRFNPFRDLVIEGHALLKHPHKFSSTLGGHVDLSDWLVRGLSNTLDTNSGKL 123
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLC 187
L L S+ S +G+LG V G+ Q+I+ ++ + G + E+LI GL
Sbjct: 124 QSGLGTLASIGSTAPFIGLLGTVWGIFHALQTISTIGQPDLAQVAGPVGEALIMTAFGLF 183
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
V+IP+ + +N ++ M FA++ A L
Sbjct: 184 VAIPAVLGFNAINRRNRIVLHAMNRFAHDLHAYL 217
>gi|78061538|ref|YP_371446.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. 383]
gi|77969423|gb|ABB10802.1| outer membrane transport energization protein ExbB [Burkholderia
sp. 383]
Length = 307
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 103/230 (44%), Gaps = 27/230 (11%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSV-NFITLRRQFREF 59
+N YGL AL+ + ++ LL + S+ SW +++ K + RR R
Sbjct: 77 INPYGLD-------ALWRGGDFVARFVLILLVVMSMGSWYIMVTKFFEQYRANRRATRAD 129
Query: 60 EQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDR--MM 117
QL W+ SL + L A + + + GA + + +DR +
Sbjct: 130 AQL-WTAPSLVEGVQQLDASSPFRFIA---------ETAIEAGAHHDEVLLEAVDRNTWI 179
Query: 118 DVAIARELEEITEKL----SFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVS 171
D ++ R + ++ +L +FLG++ S VG+ G V G+ +I AG S + V+
Sbjct: 180 DTSVERAVTNVSNRLQDGLAFLGTVGSTAPFVGLFGTVWGIYHALTAIGVAGQASIDKVA 239
Query: 172 IPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
P + E+LI +GL V++P+ + YN + +K ++ F + ++
Sbjct: 240 GP-VGEALIMTAIGLAVAVPAVLGYNFLVRRNKAVMERVRAFGAQLHVVV 288
>gi|241767823|ref|ZP_04765411.1| MotA/TolQ/ExbB proton channel [Acidovorax delafieldii 2AN]
gi|241361113|gb|EER57786.1| MotA/TolQ/ExbB proton channel [Acidovorax delafieldii 2AN]
Length = 210
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 88/211 (41%), Gaps = 23/211 (10%)
Query: 30 LLFIFSILSWSVIIQKSVNFITLRRQFREFEQL------FWSGQSLETVCKSLKNHHNIG 83
LL S+ SW VI F LR R + FW SL+ + L++
Sbjct: 8 LLLAMSVASWVVI------FWKLRLMHRATGDVARCTAAFWQAPSLDAAVQRLQSFDR-- 59
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIG-------IQDRIDRMMDVAIARELEEITEKLSFLG 136
A+ + + GA +P + ++ R++ A+ L + L
Sbjct: 60 -EALVLPMVVAANSVAQDGAAAPQATLATAGSLSQQLTRVLRDALHGALGRLQWGQVLLA 118
Query: 137 SMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCVSIPSSIA 195
++ S VG+LG V G+ ++AG + + G + E+L+ GL V+IP+ +A
Sbjct: 119 TVGSTAPFVGLLGTVWGIYHALTAMAGAGQITIDRVAGPVGEALVMTAAGLAVAIPAVLA 178
Query: 196 YNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
YN F + +EGFA + +L++ E
Sbjct: 179 YNVFGRFVGRIEADLEGFARDLRELLAQHPE 209
>gi|162453347|ref|YP_001615714.1| tolQ protein [Sorangium cellulosum 'So ce 56']
gi|161163929|emb|CAN95234.1| tolQ protein [Sorangium cellulosum 'So ce 56']
Length = 236
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 103/224 (45%), Gaps = 25/224 (11%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLF---- 63
+M + ++ MGL K + L + ++ S +V++++ I L RQ E +
Sbjct: 1 MMQFDLGHIWATMGLLSKLVAFALVLMALASVAVVVER---LIALARQASETRRFAREAR 57
Query: 64 -----WSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCD--KGARSPIGIQDRIDRM 116
W L ++ + LA + +A+ ++++ + +G P+ + R
Sbjct: 58 PVMEAWDTARLVSIAD---GYGRSALARLVGAAVRRFQRAVEAGEGGVPPVELARR---- 110
Query: 117 MDVAIAREL--EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-P 173
+V+ RE ++ LS L ++ S VG+LG V+G++ FQ+IA S + ++
Sbjct: 111 -EVSRRREAISADLRRGLSVLATVGSVAPFVGLLGTVIGIITAFQTIASTGSGGLGAVSA 169
Query: 174 GIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEF 217
GI E+LI LGL V+IP+ + +N + +E A E
Sbjct: 170 GIAEALIVTALGLGVAIPAVLCFNYLTTRIAAVELALERSAGEL 213
>gi|332529071|ref|ZP_08405036.1| MotA/TolQ/ExbB proton channel [Hylemonella gracilis ATCC 19624]
gi|332041515|gb|EGI77876.1| MotA/TolQ/ExbB proton channel [Hylemonella gracilis ATCC 19624]
Length = 242
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 86/204 (42%), Gaps = 9/204 (4%)
Query: 24 VKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIG 83
+ + LL SI SW VI+ K+++ + R+Q E FW L L +
Sbjct: 18 TRSVALLLLGMSIASWVVIVLKALDLMRCRKQAALTED-FWRSTDLAEGLNRLNLPKDRH 76
Query: 84 LAAIFMSAMSEWKKSCDKGARSP-------IGIQDRIDRMMDVAIARELEEITEKLSFLG 136
F A++E + R+ + + D + R + +I ++ L+ L
Sbjct: 77 PQDNFFRALAEEGREAALHHRNAKAQLHDSLDVSDWVTRSLRNSIDNATAKLQGGLAVLA 136
Query: 137 SMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCVSIPSSIA 195
++ S +G+ G V G+ SI ++ + G I E+LI GL V+IP+ +
Sbjct: 137 TVGSTSPFIGLFGTVWGIYHALLSIGASGQASIDQVAGPIGEALIMTAFGLAVAIPAVLG 196
Query: 196 YNKFIEDSKKFAMQMEGFANEFSA 219
N + +K Q+ FA++ A
Sbjct: 197 NNALVRGNKAVLGQLNSFAHDLHA 220
>gi|299529347|ref|ZP_07042785.1| MotA/TolQ/ExbB proton channel [Comamonas testosteroni S44]
gi|298722596|gb|EFI63515.1| MotA/TolQ/ExbB proton channel [Comamonas testosteroni S44]
Length = 215
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 84/192 (43%), Gaps = 1/192 (0%)
Query: 29 TLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIF 88
L+ + S+LSW VI+ K RR+ + FW L +K GL
Sbjct: 17 ALMLLMSVLSWVVILYKLRFMAVARRRVPQAVAAFWQMPDLVQAMAQVKALDRQGLVQAM 76
Query: 89 MSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGIL 148
A+++ + R+ R + A+ + ++ + L ++ + VG+L
Sbjct: 77 ADAVAQGGAAAQGSLAQSAAQGQRLLRSLREALGQASTQLQWGQTLLATIGATAPFVGLL 136
Query: 149 GAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCVSIPSSIAYNKFIEDSKKFA 207
G V G+ ++AG ++ + G + E+L+ GL V++P+ +AYN + +
Sbjct: 137 GTVWGIHHALGTLAGSGQVDIAQLAGPVGEALVMTAAGLAVALPAVLAYNLLGRSASQLE 196
Query: 208 MQMEGFANEFSA 219
+EGFA++ A
Sbjct: 197 AVLEGFAHDLHA 208
>gi|227327599|ref|ZP_03831623.1| putative biopolymer transport protein [Pectobacterium carotovorum
subsp. carotovorum WPP14]
Length = 146
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 62/115 (53%), Gaps = 3/115 (2%)
Query: 109 IQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYS 166
+ DR++R + I RE + L+ L S+ S +G+ G V G+M Q I +G S
Sbjct: 3 LPDRVERALQQQIQRERRSLESGLAVLASIGSTSPFIGLFGTVWGIMAALQEIGLSGSAS 62
Query: 167 NNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+ V+ P I +LI+ +G+ V++P+ + YN F+ K M+ FA++ +++
Sbjct: 63 LDTVAGP-IGNALIATGIGIAVAVPAVLIYNYFLRRLKLAVADMDDFAHDVYSVM 116
>gi|319406236|emb|CBI79873.1| Biopolymer transport exbB protein [Bartonella sp. AR 15-3]
Length = 274
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 103/247 (41%), Gaps = 32/247 (12%)
Query: 5 GLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFW 64
L++ D S F++FM VK +I LL + S+LSW++ K V + + R L
Sbjct: 14 ALSMHDFSPFSMFMAADWVVKAVIILLLLASLLSWTIAFIKIVELTVAKYKARHALHLTN 73
Query: 65 SGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSP------------------ 106
Q+L + + K I ++F + E K ++ P
Sbjct: 74 KAQTLAELIANFK---EIKGTSVFF--LEETLKEIHLSSQQPRLMTSEDLHKNQGEVFSD 128
Query: 107 --------IGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFF 158
G+++RI ++ + I + L ++ S VG+ V G+M F
Sbjct: 129 DILSCGQIDGVKERIHSLLSRYLFAATRRIASGSAILATIGSVAPFVGLFATVWGIMNSF 188
Query: 159 QSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEF 217
IA + + V PGI E+L++ +GL V+IP+ I YN FI + + A
Sbjct: 189 IGIAKSQTTRLDVVAPGIAEALLATAIGLFVAIPAVIIYNGFIRVLHGYRNDLTDIAAAI 248
Query: 218 SAILSRQ 224
++SR+
Sbjct: 249 ERLVSRE 255
>gi|319404748|emb|CBI78350.1| Biopolymer transport exbB protein [Bartonella rochalimae ATCC
BAA-1498]
Length = 274
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 104/245 (42%), Gaps = 22/245 (8%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N L + D S F++FM V+ +I L + S+LSW++ K V F + + R Q
Sbjct: 11 NTNALPMHDFSPFSMFMAADWVVQAVIIALLLASLLSWTIAFFKIVEFTVAKYKARRVFQ 70
Query: 62 LFWSGQSLETVCKSLKN------------HHNIGLAAIFMSAMSEWKKSCDKGARSPI-- 107
L Q+ + S + I L++ + M ++ P
Sbjct: 71 LTNDAQTFAELIASFQKIKGTSVFFLEEVLKEIRLSSQQLCLMKSKDLHQNQSEVFPYDI 130
Query: 108 -------GIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQS 160
G+++R+ ++ ++ + I + L ++ S VG+ V G+M F
Sbjct: 131 LSCGNIDGVKERVHSLLSRSLFAAMRRIACGSAVLATIGSVAPFVGLFATVWGIMNAFIG 190
Query: 161 IAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
IA + + V PGI E+L++ +GL V+IP+ I YN FI + + A
Sbjct: 191 IAKSQTTRLDVVAPGIAEALLATAIGLFVAIPAVILYNGFIRFLNGYRNDLADIAAAIER 250
Query: 220 ILSRQ 224
++SR+
Sbjct: 251 LISRE 255
>gi|85858717|ref|YP_460919.1| tolQ protein [Syntrophus aciditrophicus SB]
gi|85721808|gb|ABC76751.1| tolQ protein [Syntrophus aciditrophicus SB]
Length = 248
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 113/226 (50%), Gaps = 15/226 (6%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLET 71
S+ ++ M GL V+ ++ +L +FS++SW++I+ K + + + F + +L
Sbjct: 19 SVLSMVMDAGLLVQFVLLVLLLFSVVSWAIIVTKYRSIRKVNAENSLFLDAYMKCSNLAD 78
Query: 72 VCKSLKNHHNIGLAAIFMSAMSEWK-----------KSCDKGARSP-IGIQDRIDRMMDV 119
V K + + LA +F S +E + D SP I D ++R ++
Sbjct: 79 VLPEAKKYSSSTLAGVFRSGYAELVNFAKATQGASFRDRDDAVPSPEIKGLDNVERALNR 138
Query: 120 AIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI--PGIIE 177
A + E ++ L FL + SA +G+ G V G+M F+ I G+ + +++ PGI E
Sbjct: 139 ACSAEATKLEAALGFLATTGSASPFIGLFGTVWGIMDTFRGI-GFQGSATLAVVAPGISE 197
Query: 178 SLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
+LI+ GL +IP+ I YN ++ K ++M+ FA+E I+ R
Sbjct: 198 ALIATAAGLAAAIPAVIFYNYYLNRVKLMTLEMDHFASELINIVER 243
>gi|264680774|ref|YP_003280684.1| MotA/TolQ/ExbB proton channel [Comamonas testosteroni CNB-2]
gi|262211290|gb|ACY35388.1| MotA/TolQ/ExbB proton channel [Comamonas testosteroni CNB-2]
Length = 219
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 84/192 (43%), Gaps = 1/192 (0%)
Query: 29 TLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIF 88
L+ + S+LSW VI+ K RR+ + FW L +K GL
Sbjct: 21 ALMLLMSVLSWVVILYKLWFVAVARRRVPQAVAAFWQMPDLVQAMAQVKALDRQGLVQAM 80
Query: 89 MSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGIL 148
A+++ + R+ R + A+ + ++ + L ++ + VG+L
Sbjct: 81 ADAVAQGGAAAQGSLAQSAAQGQRLLRSLREALGQASTQLQWGQTLLATIGATAPFVGLL 140
Query: 149 GAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCVSIPSSIAYNKFIEDSKKFA 207
G V G+ ++AG ++ + G + E+L+ GL V++P+ +AYN + +
Sbjct: 141 GTVWGIHHALGTLAGSGQVDIAQLAGPVGEALVMTAAGLAVALPAVLAYNLLGRSASQLE 200
Query: 208 MQMEGFANEFSA 219
+EGFA++ A
Sbjct: 201 AVLEGFAHDLHA 212
>gi|330947371|gb|EGH48043.1| biopolymer transport protein ExbB [Pseudomonas syringae pv. pisi
str. 1704B]
Length = 138
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 61/115 (53%), Gaps = 1/115 (0%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
QD ++R + I +E + + L S+ S +G+ G V G+M QSI S ++
Sbjct: 3 QDLLERSLRQQIHKERRRLESGMILLASIGSTAPFIGLFGTVWGIMEALQSIGVTGSASL 62
Query: 170 VSIPGII-ESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
++ G I +L++ +G+ V++P+ + YN F+ K M+ FA++F A+ R
Sbjct: 63 EAVAGPIGHALVATGVGIAVAVPAVLIYNFFLRRLKLAVADMDDFAHDFDALAQR 117
>gi|121605464|ref|YP_982793.1| MotA/TolQ/ExbB proton channel [Polaromonas naphthalenivorans CJ2]
gi|120594433|gb|ABM37872.1| outer membrane transport energization protein ExbB [Polaromonas
naphthalenivorans CJ2]
Length = 242
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 95/212 (44%), Gaps = 10/212 (4%)
Query: 16 LFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKS 75
++ Q + K + LL + S+ SW VII K+++ L Q + E + S + + K
Sbjct: 10 VWSQGDIVTKSVAILLLLMSLASWMVIIIKALDLRRLSAQAKATESFWHSADFADGLSKF 69
Query: 76 LKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRID--RMMDVAIARELEEITEK-- 131
+ N + + K + + D +D + ++ +++IT
Sbjct: 70 GADPANP-FRLLALEGREATAHVLHKDGNTKPQLHDALDLSEWVTRSLRNSIDDITANMQ 128
Query: 132 --LSFLGSMSSAGLLVGILGAVLGMMGFFQSIA--GYYSNNVVSIPGIIESLISILLGLC 187
L+ L S+ S VG+ G V G+ +I G S + V+ P + ESLI +GL
Sbjct: 129 SGLAVLASVGSTAPFVGLFGTVWGIYHALLAIGLNGQASIDKVAGP-VGESLIMTAMGLA 187
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
V+IP+ + YN + +K + ++ FA++ A
Sbjct: 188 VAIPAVLGYNALVRGNKSVSGKLNRFAHDLHA 219
>gi|323527346|ref|YP_004229499.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. CCGE1001]
gi|323384348|gb|ADX56439.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. CCGE1001]
Length = 237
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 85/200 (42%), Gaps = 12/200 (6%)
Query: 27 IITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAA 86
+ +L SI SW +I KS + +RQ FW +L +LK
Sbjct: 19 VAYVLLAMSIASWCFLIVKSWVLLRAKRQGARAVARFWQAPTLAEGVAALKRADR---ER 75
Query: 87 IFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDV--AIARELEEITEKLSF----LGSMSS 140
+F P + R++R V A+ + L +L F L S+ S
Sbjct: 76 VFAPLAE--AALHAAEVDIPGALLARVERGERVLRALRQALNASQRRLEFGQVLLASVGS 133
Query: 141 AGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCVSIPSSIAYNKF 199
VG+LG V G+ SIA + ++ G + E+LI GL V+IP+ +AYN
Sbjct: 134 TAPFVGLLGTVWGIYHALGSIAASGQAQIENVAGPVGEALIMTAFGLVVAIPAVLAYNVL 193
Query: 200 IEDSKKFAMQMEGFANEFSA 219
++ + +++GFA++ A
Sbjct: 194 GRLVRQLSEELDGFAHDLHA 213
>gi|300312127|ref|YP_003776219.1| biopolymer transport transmembrane protein [Herbaspirillum
seropedicae SmR1]
gi|300074912|gb|ADJ64311.1| biopolymer transport transmembrane protein [Herbaspirillum
seropedicae SmR1]
Length = 243
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 104/236 (44%), Gaps = 44/236 (18%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
M NYGLA +++Q + + +IT+L S +SW V+I K + L R +
Sbjct: 1 MENYGLA-------NVWLQGDVVTRFLITILLGMSSVSWIVMIVKGMANRRLSRIGLKAH 53
Query: 61 QLFWSGQSLETVCKSL-----KNHHNIGLAAIFMSAM------------SEWKKSCDKGA 103
+ FW+ S+E ++ + NI AA+ A +EW C
Sbjct: 54 KEFWAAHSIEGGIAAIGAGTDNPYSNIATAAVEAQAQKDQPLLEGSTSNTEWVAYC---- 109
Query: 104 RSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI-- 161
+++ +D ++ + L+ L S+ S +G+ G V G+ +I
Sbjct: 110 -----VRNELD--------EQIAHLQGGLAVLASIGSTSPFIGLFGTVWGIYHALIAIGA 156
Query: 162 AGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEF 217
+G S + V+ P + ESL+ +GL V+IP+ + YN ++ A ++ F+++
Sbjct: 157 SGQASLDHVAGP-VGESLVMTAVGLFVAIPAVLGYNYVARGNRTVAQKLMRFSHQL 211
>gi|108756839|ref|YP_629081.1| MotA/TolQ/ExbB proton channel family protein [Myxococcus xanthus DK
1622]
gi|108460719|gb|ABF85904.1| MotA/TolQ/ExbB proton channel family protein [Myxococcus xanthus DK
1622]
Length = 226
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 91/188 (48%), Gaps = 22/188 (11%)
Query: 27 IITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAA 86
++ +L S+LS +++++++V F R E + S L+ V +++ + AA
Sbjct: 33 VLWVLVCLSVLSIAIMLERTVYFARHRLPDSEALAVRLSRGELDAVKAAIQGRQGME-AA 91
Query: 87 IFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVG 146
I ++ D+GA D +++++ ++RE LS+LG++ + +G
Sbjct: 92 ILREGLA----CADQGA-------DTVEQVIASTLSRERPRYERFLSYLGTLGNNAPFIG 140
Query: 147 ILGAVLGMMGFF--------QSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNK 198
+ G VLG++ F Q G V++ GI E+L++ +GL V+IP+ +A+N
Sbjct: 141 LFGTVLGIIKAFNDLGKMNAQGGGGAMQQTVMA--GISEALVATAVGLAVAIPAVVAFNV 198
Query: 199 FIEDSKKF 206
F K
Sbjct: 199 FSRQLKTL 206
>gi|153003166|ref|YP_001377491.1| MotA/TolQ/ExbB proton channel [Anaeromyxobacter sp. Fw109-5]
gi|152026739|gb|ABS24507.1| MotA/TolQ/ExbB proton channel [Anaeromyxobacter sp. Fw109-5]
Length = 255
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 96/215 (44%), Gaps = 16/215 (7%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQFREF----EQLFWSGQSLETV--CKSLKNH 79
+ +L I SI S V+ ++ V + + R++ L G+ + V + LK
Sbjct: 41 VVAVILGIMSIYSLGVMAERLVTYSRANKASRQYAASLRDLLPGGKFGDAVELSRKLKRG 100
Query: 80 HNIGLAAIFMSAMSEWKKSCDK-GARSPIGIQD-----RIDRMMDVAIARELEEITEKLS 133
H L + A+ E+ + + R P + D ++R ++ + R + ++ L
Sbjct: 101 H---LPKVLGLAIEEYSRGVEALHTRGPKDVGDFDVIAAVNRAVERSSLRTVNDLRRGLG 157
Query: 134 FLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIPS 192
L ++ S VG+LG V G++ FQ++A S + ++ G I E+LI+ GL V+IP+
Sbjct: 158 SLATIGSTAPFVGLLGTVWGIIKAFQNMAATGSGGLGTVSGAIAEALINTAFGLLVAIPA 217
Query: 193 SIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEG 227
+ +N + + + A E ++ G
Sbjct: 218 VMMFNYLTNRVEDMQVDITDSATELVDFFMKEGRG 252
>gi|170695375|ref|ZP_02886521.1| MotA/TolQ/ExbB proton channel [Burkholderia graminis C4D1M]
gi|170139775|gb|EDT07957.1| MotA/TolQ/ExbB proton channel [Burkholderia graminis C4D1M]
Length = 239
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 84/197 (42%), Gaps = 12/197 (6%)
Query: 30 LLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFM 89
+L S+ SW +I KS + +RQ FW +L +LK +F
Sbjct: 24 VLLAMSVASWCFLIVKSWVLVRAKRQATRAIARFWQAPTLAEGVAALKRADR---ERVFS 80
Query: 90 SAMSEWKKSCDKGARSPIGIQDRIDRMMDV--AIARELEEITEKLSF----LGSMSSAGL 143
P + R++R V A+ + L +L F L S+ S
Sbjct: 81 PLAE--AALHAAEVDIPGALLARVERGERVLRALRQALSASQRRLEFGQVLLASVGSTAP 138
Query: 144 LVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCVSIPSSIAYNKFIED 202
VG+LG V G+ SIA + ++ G + E+LI GL V+IP+ +AYN
Sbjct: 139 FVGLLGTVWGIYHALGSIAASGQAQIENVAGPVGEALIMTAFGLVVAIPAVLAYNVLGRL 198
Query: 203 SKKFAMQMEGFANEFSA 219
++ + +++GFA++ A
Sbjct: 199 VRQLSEELDGFAHDLHA 215
>gi|224826715|ref|ZP_03699815.1| MotA/TolQ/ExbB proton channel [Lutiella nitroferrum 2002]
gi|224600935|gb|EEG07118.1| MotA/TolQ/ExbB proton channel [Lutiella nitroferrum 2002]
Length = 225
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 100/217 (46%), Gaps = 3/217 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+++ +F Q + + LL SIL+W VI ++V RR + E W+ +
Sbjct: 1 MNLLTVFHQGDAVLVTVFMLLIAMSILTWYVIALRAVQGWRARRDNKLAEAALWNAANWP 60
Query: 71 TVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
T +L + LA +SA+ + + + + + + R + +A+E
Sbjct: 61 TAEAALAGSTSAYANLARDGLSALRHFHANAQRSLGQACDLNEFLTRAIRKRLAQETGRH 120
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLC 187
++ L S+ S +G+ G V G+ +IA ++ ++ G I E+L++ GL
Sbjct: 121 EAGMTLLASVGSTAPFIGLFGTVWGIYHALVNIAAEGQVSIATVAGPIGEALVATAAGLA 180
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+IP+ +AYN F+ + A QM+ FA++ A L Q
Sbjct: 181 AAIPAVLAYNTFMRLQRVMAQQMDHFAHDLHAQLLTQ 217
>gi|317051707|ref|YP_004112823.1| MotA/TolQ/ExbB proton channel [Desulfurispirillum indicum S5]
gi|316946791|gb|ADU66267.1| MotA/TolQ/ExbB proton channel [Desulfurispirillum indicum S5]
Length = 199
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 103/199 (51%), Gaps = 19/199 (9%)
Query: 27 IITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAA 86
I+T +F+FS+LS ++I++K+ ITLR + + Q + V +SL + NI AA
Sbjct: 16 IMTPIFLFSVLSVAIILEKA---ITLR------ASVVINPQLVAKVKRSLASG-NIDDAA 65
Query: 87 IFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE--EITEKLSFLGSMSSAGLL 144
F + + G Q R +R++D A +LE + L+ LG++++ L
Sbjct: 66 KFCAEHNTPMTRIILAGLESGGEQAR-NRILD---AGKLEALRLERYLTTLGTIANISPL 121
Query: 145 VGILGAVLGMMGFFQSIA--GYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIED 202
G+LG V GM+ F +I G + ++ GI E+L++ GL V+IP+ A+N F
Sbjct: 122 FGLLGTVSGMIKVFFTIQQQGLGHSQAMA-GGISEALMTTAFGLIVAIPALAAHNYFEAK 180
Query: 203 SKKFAMQMEGFANEFSAIL 221
++ ME A++ + +L
Sbjct: 181 AQNLVTHMEKHASDIAGML 199
>gi|162147179|ref|YP_001601640.1| biopolymer transport exbB protein [Gluconacetobacter diazotrophicus
PAl 5]
gi|209544233|ref|YP_002276462.1| MotA/TolQ/ExbB proton channel [Gluconacetobacter diazotrophicus PAl
5]
gi|161785756|emb|CAP55327.1| Biopolymer transport exbB protein [Gluconacetobacter diazotrophicus
PAl 5]
gi|209531910|gb|ACI51847.1| MotA/TolQ/ExbB proton channel [Gluconacetobacter diazotrophicus PAl
5]
Length = 355
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 106/235 (45%), Gaps = 39/235 (16%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQF---RE 58
N YGL AL+ + + ++ ++ S+ +W +++ K F R F +E
Sbjct: 115 NPYGLD-------ALWRNGDIIARGVLLIMVAMSLGTWYIMVTK---FFEQARMFSAAKE 164
Query: 59 FEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKG---ARSPIG-IQDRID 114
+FW+ S++ +LK S ++ D G A G +Q+ ID
Sbjct: 165 ASSVFWTKSSIQEGAAALK-------------PTSPFRYIADTGIVAAEHHEGTMQESID 211
Query: 115 --RMMDVAIARELEEITEKL----SFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYS 166
++I R ++ I +L +FLG++ S VG+ G V G+ +I AG S
Sbjct: 212 LHSWTSMSIQRAVDTIQSRLQGGLAFLGTVGSTSPFVGLFGTVWGIYHALTAIGIAGQAS 271
Query: 167 NNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+ V+ P + ESLI +GL ++P+ + YN + +K ++ FA + +IL
Sbjct: 272 IDKVAGP-VGESLIMTAIGLGTAVPAVLGYNLLVRRNKGAMDKVRNFAADLQSIL 325
>gi|170731972|ref|YP_001763919.1| MotA/TolQ/ExbB proton channel [Burkholderia cenocepacia MC0-3]
gi|254246339|ref|ZP_04939660.1| MotA/TolQ/ExbB proton channel [Burkholderia cenocepacia PC184]
gi|124871115|gb|EAY62831.1| MotA/TolQ/ExbB proton channel [Burkholderia cenocepacia PC184]
gi|169815214|gb|ACA89797.1| MotA/TolQ/ExbB proton channel [Burkholderia cenocepacia MC0-3]
Length = 222
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 91/216 (42%), Gaps = 13/216 (6%)
Query: 17 FMQMGLAVKCIIT-LLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKS 75
+++ G A+ ++ +L S+ SW + K+ + +RQ FW SL+ +
Sbjct: 10 YLESGDAITHAVSYVLLAMSVASWCFLFMKAWLLVRAKRQGPRALAAFWRAPSLDAGIAA 69
Query: 76 LKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDV--AIARELEEITEKLS 133
L +F+ P + R++R V A+ + +L
Sbjct: 70 LAGADR---ERVFVPLAE--AARDAADDHDPTALAARVERSERVLRALRHAMLHSQRRLE 124
Query: 134 F----LGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCV 188
F L S+ S VG+LG V G+ SIA + ++ G + E+LI GL V
Sbjct: 125 FGQVLLASIGSTAPFVGLLGTVWGIYHALGSIAASGQAQIENVAGPVGEALIMTAFGLVV 184
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+IP+ +AYN ++ A +++GFA + + Q
Sbjct: 185 AIPAVLAYNILGRLVRQLAEELDGFARDLHVFVCAQ 220
>gi|258543131|ref|YP_003188564.1| ExbB/TolQ/MotA [Acetobacter pasteurianus IFO 3283-01]
gi|256634209|dbj|BAI00185.1| ExbB/TolQ/MotA [Acetobacter pasteurianus IFO 3283-01]
gi|256637269|dbj|BAI03238.1| ExbB/TolQ/MotA [Acetobacter pasteurianus IFO 3283-03]
gi|256640321|dbj|BAI06283.1| ExbB/TolQ/MotA [Acetobacter pasteurianus IFO 3283-07]
gi|256643378|dbj|BAI09333.1| ExbB/TolQ/MotA [Acetobacter pasteurianus IFO 3283-22]
gi|256646433|dbj|BAI12381.1| ExbB/TolQ/MotA [Acetobacter pasteurianus IFO 3283-26]
gi|256649486|dbj|BAI15427.1| ExbB/TolQ/MotA [Acetobacter pasteurianus IFO 3283-32]
gi|256652472|dbj|BAI18406.1| ExbB/TolQ/MotA [Acetobacter pasteurianus IFO 3283-01-42C]
gi|256655530|dbj|BAI21457.1| ExbB/TolQ/MotA [Acetobacter pasteurianus IFO 3283-12]
Length = 337
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 104/227 (45%), Gaps = 23/227 (10%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YGL AL+ + + ++ ++ S+ +W ++I K + L +E +
Sbjct: 96 NPYGLG-------ALWSNGDIIARGVLLIMLTMSLGTWYIMITKFIEQARLFAAAKEATK 148
Query: 62 LFWSGQSLETVCKSLKNHHN---IGLAAIFMSAMSE--WKKSCDKGARSPIGIQDRIDRM 116
FW+ S++ +L + I I + E ++S D + + + IQ ++ +
Sbjct: 149 SFWTKHSIQEGASALTSTSPFRYIADTGIVAAEHHEGTMQESIDLHSWTGMSIQRAVNNI 208
Query: 117 MDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPG 174
+ + + L+FLG++ S +G+ G V G+ +I AG S + V+ P
Sbjct: 209 QN--------SLQKGLAFLGTVGSTSPFIGLFGTVWGIYHALTAIGIAGQASIDKVAGP- 259
Query: 175 IIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+ ESLI +GL ++P+ + YN + +K + FA++ +IL
Sbjct: 260 VGESLIMTAIGLATAVPAVLGYNLLVRRNKTAMDLVRDFASDLQSIL 306
>gi|258541172|ref|YP_003186605.1| ExbB/TolQ/MotA [Acetobacter pasteurianus IFO 3283-01]
gi|258542394|ref|YP_003187827.1| ExbB/TolQ/MotA [Acetobacter pasteurianus IFO 3283-01]
gi|256632250|dbj|BAH98225.1| ExbB/TolQ/MotA [Acetobacter pasteurianus IFO 3283-01]
gi|256633472|dbj|BAH99447.1| ExbB/TolQ/MotA [Acetobacter pasteurianus IFO 3283-01]
gi|256635307|dbj|BAI01276.1| ExbB/TolQ/MotA [Acetobacter pasteurianus IFO 3283-03]
gi|256636531|dbj|BAI02500.1| ExbB/TolQ/MotA [Acetobacter pasteurianus IFO 3283-03]
gi|256638362|dbj|BAI04324.1| ExbB/TolQ/MotA [Acetobacter pasteurianus IFO 3283-07]
gi|256639584|dbj|BAI05546.1| ExbB/TolQ/MotA [Acetobacter pasteurianus IFO 3283-07]
gi|256641416|dbj|BAI07371.1| ExbB/TolQ/MotA [Acetobacter pasteurianus IFO 3283-22]
gi|256642640|dbj|BAI08595.1| ExbB/TolQ/MotA [Acetobacter pasteurianus IFO 3283-22]
gi|256644471|dbj|BAI10419.1| ExbB/TolQ/MotA [Acetobacter pasteurianus IFO 3283-26]
gi|256645695|dbj|BAI11643.1| ExbB/TolQ/MotA [Acetobacter pasteurianus IFO 3283-26]
gi|256647526|dbj|BAI13467.1| ExbB/TolQ/MotA [Acetobacter pasteurianus IFO 3283-32]
gi|256648748|dbj|BAI14689.1| ExbB/TolQ/MotA [Acetobacter pasteurianus IFO 3283-32]
gi|256650579|dbj|BAI16513.1| ExbB/TolQ/MotA [Acetobacter pasteurianus IFO 3283-01-42C]
gi|256651801|dbj|BAI17735.1| ExbB/TolQ/MotA [Acetobacter pasteurianus IFO 3283-01-42C]
gi|256653570|dbj|BAI19497.1| ExbB/TolQ/MotA [Acetobacter pasteurianus IFO 3283-12]
gi|256654792|dbj|BAI20719.1| ExbB/TolQ/MotA [Acetobacter pasteurianus IFO 3283-12]
Length = 337
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 104/227 (45%), Gaps = 23/227 (10%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YGL AL+ + + ++ ++ S+ +W ++I K + L +E +
Sbjct: 96 NPYGLG-------ALWSNGDIIARGVLLIMLTMSLGTWYIMITKFIEQARLFAAAKEATK 148
Query: 62 LFWSGQSLETVCKSLKNHHN---IGLAAIFMSAMSE--WKKSCDKGARSPIGIQDRIDRM 116
FW+ S++ +L + I I + E ++S D + + + IQ ++ +
Sbjct: 149 SFWTKHSIQEGASALTSTSPFRYIADTGIVAAEHHEGTMQESIDLHSWTGMSIQRAVNNI 208
Query: 117 MDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPG 174
+ + + L+FLG++ S +G+ G V G+ +I AG S + V+ P
Sbjct: 209 QN--------SLQKGLAFLGTVGSTSPFIGLFGTVWGIYHALTAIGIAGQASIDKVAGP- 259
Query: 175 IIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+ ESLI +GL ++P+ + YN + +K + FA++ +IL
Sbjct: 260 VGESLIMTAIGLATAVPAVLGYNLLVRRNKTAMDLVRDFASDLQSIL 306
>gi|146339255|ref|YP_001204303.1| biopolymer transport protein ExbB/TolQ family [Bradyrhizobium sp.
ORS278]
gi|146192061|emb|CAL76066.1| Putative Biopolymer transport protein, ExbB/TolQ family
[Bradyrhizobium sp. ORS278]
Length = 651
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 61/119 (51%), Gaps = 1/119 (0%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ I ++D +E + + + L S G +G+LG V+G+M F +IA NV
Sbjct: 526 ESIRAVLDSGFVQETQRLNRMMVMLTIAISGGPFLGLLGTVVGVMITFAAIAATGDVNVN 585
Query: 171 SI-PGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
+I PGI +L++ + GL V+IP+ AYN I K +M+ F +E ++ GN
Sbjct: 586 AIAPGIAAALVATVAGLGVAIPALFAYNYLITRIKDATSEMQVFIDEMITRIAETYSGN 644
>gi|192290802|ref|YP_001991407.1| tonB-system energizer ExbB [Rhodopseudomonas palustris TIE-1]
gi|192284551|gb|ACF00932.1| tonB-system energizer ExbB [Rhodopseudomonas palustris TIE-1]
Length = 265
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 99/220 (45%), Gaps = 13/220 (5%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQF----REFEQLFWS 65
D+S + +F+ V+ ++ L + S+ +W+V + KS I LRR R ++L S
Sbjct: 42 DLSPWGMFLGADAVVRTVMVGLALASLAAWTVWLAKS---IELRRSSAVAQRGLDRLE-S 97
Query: 66 GQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
+L+ + H+ A M + + S GA G ++R+ ++ A E
Sbjct: 98 DITLQQAAAETADQHD---AVAQMIQTVDREASLSGGAHDD-GFRERVALRLERVEAAEA 153
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILL 184
L S+ + VG+ G V G+M F I+ + N+ V PGI E+L++ L
Sbjct: 154 RRAAIGTGLLASIGAVAPFVGLFGTVWGIMNAFIGISKANTTNLAVVAPGIAEALLATAL 213
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
GL +IP+ + YN + + + + ++SR+
Sbjct: 214 GLVAAIPAVVIYNHLTRRVTAYRALLGDASTQLLLMISRE 253
>gi|326386264|ref|ZP_08207888.1| MotA/TolQ/ExbB proton channel [Novosphingobium nitrogenifigens DSM
19370]
gi|326209489|gb|EGD60282.1| MotA/TolQ/ExbB proton channel [Novosphingobium nitrogenifigens DSM
19370]
Length = 253
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 97/214 (45%), Gaps = 34/214 (15%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLA 85
+T++ + S S+ ++I K + + Q++ + +G E K KN
Sbjct: 34 ATVTIMGVMSFGSFFILITKFLEQSKIMGQYKALAGFWRAGTLKEGAAKLDKN------- 86
Query: 86 AIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDV---------AIARELEEITEKLS--- 133
S W++ + G I +D+ +M D ++AR I KL+
Sbjct: 87 -------SAWRQVVEDG----IAAEDQHSKMPDATEAHDWLHGSLARSEASINSKLAGGL 135
Query: 134 -FLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGLCVSI 190
FL ++ + +G+ G V+G+ +I AG S + V+ P + ESLI LGL V++
Sbjct: 136 PFLATVGATAPFIGLFGTVVGIYRALIAIGLAGSASIDKVAGP-VGESLIMTALGLLVAV 194
Query: 191 PSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
P+ +AYN +K+ A + GF+ + A L+ +
Sbjct: 195 PAVLAYNYLQSRNKRIAELLTGFSTDVLAYLASK 228
>gi|91781063|ref|YP_556270.1| MotA/TolQ/ExbB proton channel [Burkholderia xenovorans LB400]
gi|91693723|gb|ABE36920.1| outer membrane transport energization protein ExbB [Burkholderia
xenovorans LB400]
Length = 250
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 90/201 (44%), Gaps = 15/201 (7%)
Query: 25 KCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLET----VCKSLKN-H 79
+ I+ +L S+LSW+V+ K +R+Q E+ FW+ + + + K ++N +
Sbjct: 18 RAILIVLATMSVLSWAVVFAKGATLTRVRQQSAVAERRFWTASTYDEGIALLGKQIENPY 77
Query: 80 HNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDR---IDRMMDVAIARELEEITEKLSFLG 136
++ +A E + + IG +R + R + V++ + + + L
Sbjct: 78 RDLAIAG------REASEQIFDAQQLLIGSLNRNEWVSRCLKVSLDDYVARLQRGTAILA 131
Query: 137 SMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCVSIPSSIA 195
S+ S VG+ G V G+ +I ++ + G + ESLI GL V+IP+ +
Sbjct: 132 SVGSTAPFVGLFGTVWGIYHALMAIGASAQASLDHVAGPVGESLIMTAFGLFVAIPAVLG 191
Query: 196 YNKFIEDSKKFAMQMEGFANE 216
YN +K ++ F +E
Sbjct: 192 YNGVSRGNKAVVHKLVRFTHE 212
>gi|301630152|ref|XP_002944191.1| PREDICTED: biopolymer transport protein exbB-like [Xenopus
(Silurana) tropicalis]
Length = 220
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 93/212 (43%), Gaps = 9/212 (4%)
Query: 17 FMQMGLAVKCIITLL-FIFSILSWSVIIQKSVNFITLRRQFREFEQL---FWSGQSLETV 72
+ + G AV + LL F S+ SW VI+ K LRR + + FW SL
Sbjct: 6 WWRQGDAVTQVTALLLFAMSVASWVVILWK---LRLLRRASADLPRAIAAFWQTASLADG 62
Query: 73 CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQ-DRIDRMMDVAIARELEEITEK 131
+ L A + G+ + G + ++ R++ A+ L +
Sbjct: 63 VNRVPPFDRESLVLPLARAAHTLAAAAPSGSLAAQGSRAQQLTRVLRDALHGVLGRLQWG 122
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCVSI 190
L ++ S VG+LG V G+ +IAG + + G + E+L+ GL V+I
Sbjct: 123 QVLLATVGSTAPFVGLLGTVWGIYHALATIAGAGQITIERVAGPVGEALVMTAAGLAVAI 182
Query: 191 PSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
P+ +AYN + + + ++EGFA + A+L+
Sbjct: 183 PAVLAYNVYGRIAGRIEAELEGFAYDLRALLA 214
>gi|167837877|ref|ZP_02464760.1| MotA/TolQ/ExbB proton channel family protein [Burkholderia
thailandensis MSMB43]
Length = 231
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 90/209 (43%), Gaps = 11/209 (5%)
Query: 17 FMQMGLAV-KCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKS 75
+++ G AV + +L SI SW ++ K+ + +RQ FW +L+ +
Sbjct: 10 YLESGDAVTHAVAYVLLAMSIASWCFLLVKAWVLVRAKRQGPGALAAFWRAATLDDGVAA 69
Query: 76 LKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDV--AIARELEEITEKLS 133
L+ +F + + P + R++R V A+ L +L
Sbjct: 70 LRAADK---ERVFAPLAEAARDADAASRVEPHALFARVERGERVLRALRHALRASQRRLE 126
Query: 134 F----LGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCV 188
F L S+ S VG+LG V G+ SIA + ++ G + E+LI GL V
Sbjct: 127 FGQVLLASIGSTAPFVGLLGTVWGIYHALGSIAASGQAQIENVAGPVGEALIMTAFGLVV 186
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEF 217
+IP+ +AYN ++ +++GFA +
Sbjct: 187 AIPAVLAYNILGRLVRQLVEELDGFARDL 215
>gi|254180641|ref|ZP_04887239.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei 1655]
gi|184211180|gb|EDU08223.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei 1655]
Length = 235
Score = 55.8 bits (133), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 95/210 (45%), Gaps = 13/210 (6%)
Query: 17 FMQMGLAV-KCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKS 75
++ G AV + +L SI SW ++ K+ + +RQ FW +L+ +
Sbjct: 10 YLASGDAVTHAVAYVLLAMSIASWCFLLVKAWVLVRAKRQGPAALAAFWRAATLDDGIAA 69
Query: 76 LKNHHNIGLAAIFMSAMSEWKKSCDKGAR-SPIGIQDRIDRMMDV--AIARELEEITEKL 132
L+ +F + ++E + D +R P + R++R V A+ L +L
Sbjct: 70 LRAADK---ERVF-APLAEAAREADTASRVEPHALAARVERGERVLRALRHALRASQRRL 125
Query: 133 SF----LGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLC 187
F L S+ S VG+LG V G+ SIA + ++ G + E+LI GL
Sbjct: 126 EFGQVLLASIGSTAPFVGLLGTVWGIYHALGSIAASGQAQIENVAGPVGEALIMTAFGLV 185
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEF 217
V+IP+ +AYN ++ +++GFA +
Sbjct: 186 VAIPAVLAYNILGRLVRQLVEELDGFARDL 215
>gi|319790082|ref|YP_004151715.1| MotA/TolQ/ExbB proton channel [Thermovibrio ammonificans HB-1]
gi|317114584|gb|ADU97074.1| MotA/TolQ/ExbB proton channel [Thermovibrio ammonificans HB-1]
Length = 209
Score = 55.8 bits (133), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 95/209 (45%), Gaps = 28/209 (13%)
Query: 30 LLFIFSILSWSVIIQKSVNFITLR-------RQFREFEQLFWSGQSLETV--CKSLKNHH 80
+L S++S +VIIQK ITLR F+ G + V CK KN
Sbjct: 16 ILLFLSVVSLAVIIQK---LITLRLSKLIPKEDFKLLADFIRRGSLGDAVELCKRRKN-- 70
Query: 81 NIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSS 140
+ + E K A +P ++ +V+ +++ E+ ++ L ++++
Sbjct: 71 ------LLTEVVHETFKHV---ALNPT--RETFLSAFEVSARKKMMELERGMALLATVAA 119
Query: 141 AGLLVGILGAVLGMM---GFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYN 197
L+G+LG V+GM+ G + G N GI E+L++ + GL V+IP+ + YN
Sbjct: 120 ISPLLGLLGTVIGMVKIFGVLTAGGGAIGNPQQLSAGIAEALLTTIFGLVVAIPAVVMYN 179
Query: 198 KFIEDSKKFAMQMEGFANEFSAILSRQTE 226
F + K A ++E F+ L R+ +
Sbjct: 180 LFNKKLDKIAAELEAAGVFFANALGRRQK 208
>gi|107021729|ref|YP_620056.1| MotA/TolQ/ExbB proton channel [Burkholderia cenocepacia AU 1054]
gi|116688675|ref|YP_834298.1| MotA/TolQ/ExbB proton channel [Burkholderia cenocepacia HI2424]
gi|105891918|gb|ABF75083.1| MotA/TolQ/ExbB proton channel [Burkholderia cenocepacia AU 1054]
gi|116646764|gb|ABK07405.1| MotA/TolQ/ExbB proton channel [Burkholderia cenocepacia HI2424]
Length = 222
Score = 55.8 bits (133), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 91/216 (42%), Gaps = 13/216 (6%)
Query: 17 FMQMGLAVKCIIT-LLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKS 75
+++ G A+ ++ +L S+ SW + K+ + +RQ FW SL+ +
Sbjct: 10 YLESGDAITHAVSYVLLAMSVASWCFLFMKAWLLVRAKRQGPRALAAFWRAPSLDAGIAA 69
Query: 76 LKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDV--AIARELEEITEKLS 133
L +F+ P + R++R V A+ + +L
Sbjct: 70 LAGADR---ERVFVPLAE--AARDAADDHDPTALAARVERSERVLRALRHAMLRSQRRLE 124
Query: 134 F----LGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCV 188
F L S+ S VG+LG V G+ SIA + ++ G + E+LI GL V
Sbjct: 125 FGQVLLASIGSTAPFVGLLGTVWGIYHALGSIAASGQAQIENVAGPVGEALIMTAFGLVV 184
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+IP+ +AYN ++ A +++GFA + + Q
Sbjct: 185 AIPAVLAYNILGRLVRQLAEELDGFARDLHVFVCAQ 220
>gi|86749340|ref|YP_485836.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris HaA2]
gi|86572368|gb|ABD06925.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris HaA2]
Length = 671
Score = 55.8 bits (133), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 91/205 (44%), Gaps = 28/205 (13%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQL---------------FWSGQSLE 70
+I +L + +++SW V++ ++ LRRQ R + + S + +
Sbjct: 437 VVIAILMVMAVISWMVMVDRAS---YLRRQARANARFMACYNAVDFDLRLLGYGSPEDVA 493
Query: 71 TVCKSLKNH-----HNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRM---MDVAIA 122
T+ L N + L I+ A E ++ +G P + + M +D +
Sbjct: 494 TLGGRLDNKDAALMRSSSLYRIYHIAADEIRRRSGQGG-VPTLSSNSVAAMRAALDGGVV 552
Query: 123 RELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLIS 181
RE + + + L S G +G+LG V+G+M F +IA NV +I PGI +L++
Sbjct: 553 RESQRLNRLMVMLTIAISGGPFLGLLGTVVGVMITFAAIAASGDVNVNAIAPGIAAALVA 612
Query: 182 ILLGLCVSIPSSIAYNKFIEDSKKF 206
+ GL V+IP+ YN I K
Sbjct: 613 TVAGLGVAIPALFGYNYLISQIKNL 637
>gi|226329175|ref|ZP_03804693.1| hypothetical protein PROPEN_03078 [Proteus penneri ATCC 35198]
gi|225202361|gb|EEG84715.1| hypothetical protein PROPEN_03078 [Proteus penneri ATCC 35198]
Length = 196
Score = 55.8 bits (133), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 61/108 (56%), Gaps = 1/108 (0%)
Query: 93 SEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVL 152
+E +++ + ++ GI++R++ M+ +A + E+ +L ++ + +G+ G V
Sbjct: 55 AELERTYSQESKVASGIKERVEMRMERRVAAIIRELGRGNGYLATIGAISPFIGLFGTVW 114
Query: 153 GMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKF 199
G+M F IA + N+ V PGI E+L++ +GL +IP+ I YN F
Sbjct: 115 GIMNSFIGIAHSQTTNLAVVAPGIAEALLATAIGLIAAIPAVIIYNIF 162
>gi|189500643|ref|YP_001960113.1| protein TolQ [Chlorobium phaeobacteroides BS1]
gi|189496084|gb|ACE04632.1| protein TolQ [Chlorobium phaeobacteroides BS1]
Length = 220
Score = 55.8 bits (133), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 93/186 (50%), Gaps = 7/186 (3%)
Query: 35 SILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSE 94
S+ SW++I+ K+ + R F F+ +++ V +N+ N LA +F + E
Sbjct: 30 SVFSWTIIMMKARFIGRAMSESRGFLHYFFDVSNVDKVFGETENYRNGSLARVFRAGYLE 89
Query: 95 WKK--SCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVL 152
++ RS ++RI R + + E + ++ + FL ++ + +G+ G V
Sbjct: 90 YRALGELKDSERS----EERIARAVRREVNEESKSLSRYVPFLATVGNTAPFIGLFGTVW 145
Query: 153 GMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
G+M F SI S ++ ++ PGI E+LI+ GL +IP++IAYN + + ++
Sbjct: 146 GIMNSFMSIGVTQSASLATVAPGIAEALIATAAGLAAAIPAAIAYNYLTQQINQIERDLD 205
Query: 212 GFANEF 217
F+ EF
Sbjct: 206 DFSGEF 211
>gi|261414613|ref|YP_003248296.1| MotA/TolQ/ExbB proton channel [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|261371069|gb|ACX73814.1| MotA/TolQ/ExbB proton channel [Fibrobacter succinogenes subsp.
succinogenes S85]
Length = 224
Score = 55.5 bits (132), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 98/216 (45%), Gaps = 20/216 (9%)
Query: 19 QMGLAVKCIITLLFIFSILSWSVIIQK----SVNFITLRRQFREFEQL--FWSGQSLETV 72
Q + I+ +L S+ SW +II K N + F+EF +L F Q L TV
Sbjct: 4 QSDIVTMIILGILAFMSLGSWGIIIVKFFKHKSNLRANAKFFKEFCKLKHFSELQKLCTV 63
Query: 73 CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI---- 128
++ L + + ++E K KG + IQ R +++ AI R +E I
Sbjct: 64 S------NDSALRLLSVEVLNEVSKF--KGKVTYESIQHR-SSLLEDAIQRSIEGIRMGE 114
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMM-GFFQSIAGYYSNNVVSIPGIIESLISILLGLC 187
L+FL + S+ G+LG V G+M FFQ ++ V PGI +LI+ + GL
Sbjct: 115 DRYLTFLATSSNLAPFFGLLGTVWGIMIAFFQIGHHGSADLTVVAPGIAMALITTVAGLL 174
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
V+IP+S YN F + F ++ ++ R
Sbjct: 175 VAIPASAGYNYFTSKNGSNETSYYNFGSQVLSLFKR 210
>gi|145298849|ref|YP_001141690.1| MotA/TolQ/ExbB proton channel family protein [Aeromonas salmonicida
subsp. salmonicida A449]
gi|142851621|gb|ABO89942.1| MotA/TolQ/ExbB proton channel family protein [Aeromonas salmonicida
subsp. salmonicida A449]
Length = 250
Score = 55.5 bits (132), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 106/227 (46%), Gaps = 25/227 (11%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N G+ ++ I + M +G C TLL I V+ Q+ RR +F
Sbjct: 18 QNTGVGLLPF-ILLVLMSLG---TCYYTLLKI-------VLGQRE------RRLNAQFVT 60
Query: 62 LFWSGQSLETVCKSLKN---HHNIG-LAAIFMSAMSEWKKSCDKGARSPIGIQDR-IDRM 116
FW +S++ + + L + G + + ++ +++ ++ ++ +G D + R
Sbjct: 61 RFWQHESVQDMERQLAHLTPQEAYGRVTSTALATVAQLNRAGERTVSLKLGSPDEFLLRA 120
Query: 117 MDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPG 174
+ AI E + L+FL S+ SA +G+ G V G+ +I AG S + V+ P
Sbjct: 121 LRQAITHERVRLERGLAFLASVGSAAPFIGLFGTVWGIYHALLAIGAAGQSSLDKVAGP- 179
Query: 175 IIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+ E+LI GL V++P+ + YN F+ ++ +E FA + A+L
Sbjct: 180 VGEALIMTGFGLAVALPAVLVYNFFVRRNRLKLAALEAFAYDLFALL 226
>gi|307730981|ref|YP_003908205.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. CCGE1003]
gi|307585516|gb|ADN58914.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. CCGE1003]
Length = 239
Score = 55.5 bits (132), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 83/200 (41%), Gaps = 12/200 (6%)
Query: 27 IITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAA 86
+ +L SI SW +I KS + +RQ FW +L L
Sbjct: 21 VAYVLLAMSIASWCFLIVKSWVLVRAKRQGARAVARFWQAPTLAEGVAGLTRADR---ER 77
Query: 87 IFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDV--AIARELEEITEKLSF----LGSMSS 140
+F P + R++R V A+ + L +L F L S+ S
Sbjct: 78 VFAPLAE--AALQAAEVDIPGALLARVERNERVLRALRQALSASQRRLEFGQVLLASVGS 135
Query: 141 AGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCVSIPSSIAYNKF 199
VG+LG V G+ SIA + S+ G + E+LI GL V+IP+ +AYN
Sbjct: 136 TAPFVGLLGTVWGIYHALGSIAASGQAQIESVAGPVGEALIMTAFGLVVAIPAVLAYNVL 195
Query: 200 IEDSKKFAMQMEGFANEFSA 219
++ + +++GFA++ A
Sbjct: 196 GRLVRQLSEELDGFAHDLHA 215
>gi|114777003|ref|ZP_01452023.1| Biopolymer transport protein [Mariprofundus ferrooxydans PV-1]
gi|114552524|gb|EAU54984.1| Biopolymer transport protein [Mariprofundus ferrooxydans PV-1]
Length = 206
Score = 55.5 bits (132), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 102/216 (47%), Gaps = 33/216 (15%)
Query: 17 FMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQF-------REFEQLFWSG--Q 67
F+Q G ++ L SILS ++I +++ +LRR + E G +
Sbjct: 8 FIQQG---GTVMYFLLATSILSLTIIFERA---WSLRRSVVIPLNVVNQVETSVRDGDVK 61
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
S T C+ HHN ++ I W ++G + + +++ + +E+
Sbjct: 62 SAMTFCQ----HHNTAMSRIL------WVALANRGVNRSV-----MKEILEESGRQEVAH 106
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQ--SIAGYYSNNVVSIPGIIESLISILLG 185
+ + LG +++ L+G+LG V+GM+ FQ S+ G +V++ GI ++L + G
Sbjct: 107 LERFVGVLGVVAAIAPLLGLLGTVIGMIEVFQQISLVGVGKADVLA-GGISKALNTTAFG 165
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
L V+IPS +AY + +F +++E A F +L
Sbjct: 166 LVVAIPSMVAYRYYESRVDRFVLEIEHHALRFVELL 201
>gi|86748366|ref|YP_484862.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris HaA2]
gi|86571394|gb|ABD05951.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris HaA2]
Length = 266
Score = 55.5 bits (132), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 99/199 (49%), Gaps = 18/199 (9%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S + +F + V+ ++ L + S+ +W+V + K++ LRR+ ++
Sbjct: 43 DLSPWGMFTSADIVVQVVMAGLVVASLATWTVWLSKTLE---LRRETARARDGLARLEAD 99
Query: 70 ETVCK-SLKNHHNIGLAAIFMSAMSE-----WKKSCDKGARSPIGIQDRIDRMMDVAIAR 123
T+ + + +A + +A E W S D + + + R++R+ + A++R
Sbjct: 100 VTLAELRSADEAQDAVAQLVQTAAREASLSGW--SFDDEFKERVAL--RLERV-EAAMSR 154
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISI 182
+ T L+ +G+++ VG+ G V G+M F I+ ++ N+ V PGI E+L++
Sbjct: 155 RIARGTGILATIGAVAP---FVGLFGTVWGIMNAFIGISEAHTTNLAVVAPGIAEALLAT 211
Query: 183 LLGLCVSIPSSIAYNKFIE 201
LGL ++P+ + YN +
Sbjct: 212 ALGLVAAVPAVVIYNYLVR 230
>gi|154251452|ref|YP_001412276.1| MotA/TolQ/ExbB proton channel [Parvibaculum lavamentivorans DS-1]
gi|154155402|gb|ABS62619.1| MotA/TolQ/ExbB proton channel [Parvibaculum lavamentivorans DS-1]
Length = 299
Score = 55.5 bits (132), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 99/218 (45%), Gaps = 15/218 (6%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YGL+ AL+ Q K + +L I S+ SW V+I K L QF +
Sbjct: 83 NPYGLS-------ALWEQGDFVSKATLLILAIMSMGSWYVLITKLFEQRRLFDQFNRVIK 135
Query: 62 LFWSGQSLETVCKSLKNHHNI-GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVA 120
LF +L ++L ++ +A A++++ +KG S + + + ++ A
Sbjct: 136 LFAPTDTLRAGIEALPKRNSYRAIAEDGEEAVAQF----NKGLSSEVTLSEWSTAALNRA 191
Query: 121 IARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIES 178
+ ++ L+FL ++ S VG+ G V G+ +I +G S + V+ P + E+
Sbjct: 192 VDTLAAKLQGGLAFLATVGSTAPFVGLFGTVWGIYHALVAIGVSGQASIDKVAGP-VGEA 250
Query: 179 LISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANE 216
LI +GL V++P+ + YN +K FA E
Sbjct: 251 LIMTAIGLAVAVPAVLGYNLLTRRNKGVVSHARRFATE 288
>gi|255593120|ref|XP_002535793.1| Biopolymer transport exbB protein, putative [Ricinus communis]
gi|223521926|gb|EEF26588.1| Biopolymer transport exbB protein, putative [Ricinus communis]
Length = 294
Score = 55.5 bits (132), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 94/228 (41%), Gaps = 26/228 (11%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YGL AL+ Q K + +L I S +W +++ K L Q R Q
Sbjct: 71 NPYGLG-------ALWAQGDFVAKGTLIILVIMSAFTWYIMVTK------LWEQQRLISQ 117
Query: 62 L-----FWSGQSL-ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDR 115
W +SL E + K KN +A + A P + + R
Sbjct: 118 AGAARRAWDAKSLGEGIQKLAKNSAYRAVAEDGLRAREHHDGKLTDNIALPEWVTSNVQR 177
Query: 116 MMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIP 173
+D +R + L+FL ++ S VG+ G V G+ +I AG S + V+ P
Sbjct: 178 SVDGINSR----MQGGLAFLATVGSTAPFVGLFGTVWGIYHALIAIGLAGQASIDKVAGP 233
Query: 174 GIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+ E+LI +GL V++P+ + YN + SK + FA + A L
Sbjct: 234 -VGEALIMTAIGLAVAVPAVLGYNWLVRRSKVALEDLHAFAEDVQAYL 280
>gi|87198042|ref|YP_495299.1| MotA/TolQ/ExbB proton channel [Novosphingobium aromaticivorans DSM
12444]
gi|87133723|gb|ABD24465.1| outer membrane transport energization protein ExbB [Novosphingobium
aromaticivorans DSM 12444]
Length = 249
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 93/214 (43%), Gaps = 35/214 (16%)
Query: 19 QMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL-ETVCKSLK 77
Q G + +L I S S+ ++ K + Q++ FW +L E K K
Sbjct: 27 QGGFIAYATVVILGIMSFGSFFILFTKFFEQNKILGQYKTIRTTFWKAPTLREGAAKLDK 86
Query: 78 NHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDV---------AIARELEEI 128
N S W++ D G I +D+ +M D ++AR I
Sbjct: 87 N--------------SAWRQLVDDG----ISAEDQHSKMTDALEAHDWLHGSLARSEASI 128
Query: 129 TEKLS----FLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISI 182
+L+ FL ++ + +G+ G V+G+ +I AG S + V+ P + E+LI
Sbjct: 129 NSRLASGLPFLATVGATSPFIGLFGTVVGIYRALINIGLAGSASIDKVAGP-VGEALIMT 187
Query: 183 LLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANE 216
LGL V++P+ +AYN +K+ A + GF+ +
Sbjct: 188 ALGLLVAVPAVLAYNWLQARNKRIAELLSGFSTD 221
>gi|186477338|ref|YP_001858808.1| MotA/TolQ/ExbB proton channel [Burkholderia phymatum STM815]
gi|184193797|gb|ACC71762.1| MotA/TolQ/ExbB proton channel [Burkholderia phymatum STM815]
Length = 250
Score = 55.1 bits (131), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 88/200 (44%), Gaps = 12/200 (6%)
Query: 27 IITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAA 86
+ +L SI SW +I KS +RQ FW +L +L+ +
Sbjct: 20 VAYVLLAMSIASWCFLIVKSWMLSRAKRQGPRAVARFWLAPTLAEGVATLR----LADRE 75
Query: 87 IFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDV--AIARELEEITEKLSF----LGSMSS 140
S ++E + +P + R++R V A+ + L +L F L S+ S
Sbjct: 76 RIFSPLAEAALKASE-VETPGALLARVERSERVLRALRQALHRSQRRLEFGQVLLASIGS 134
Query: 141 AGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCVSIPSSIAYNKF 199
VG+LG V G+ SIA + ++ G + E+LI GL V+IP+ +AYN
Sbjct: 135 TAPFVGLLGTVWGIYHALGSIAQSGQAMIENVAGPVGEALIMTAFGLVVAIPAVLAYNVL 194
Query: 200 IEDSKKFAMQMEGFANEFSA 219
++ + ++GFA++ A
Sbjct: 195 GRMVRQVSEDLDGFAHDLHA 214
>gi|134294732|ref|YP_001118467.1| MotA/TolQ/ExbB proton channel [Burkholderia vietnamiensis G4]
gi|134137889|gb|ABO53632.1| MotA/TolQ/ExbB proton channel [Burkholderia vietnamiensis G4]
Length = 231
Score = 55.1 bits (131), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 90/212 (42%), Gaps = 3/212 (1%)
Query: 17 FMQMGLAV-KCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKS 75
+++ G A+ + +L S+ SW ++ KS + +RQ FW SL+ +
Sbjct: 10 YLESGDAITHAVAYVLLAMSVASWCFLLVKSWLLVRAKRQGPRALAAFWRAASLDAGIAA 69
Query: 76 LKNHHNIGLAAIFMSAMSEWKKSCDKGA-RSPIGIQDRIDRMMDVAIARELEEITEKLSF 134
L + A + D A + + +R+ R + A+ R +
Sbjct: 70 LAGADRERVFVPLAEAARDAADEHDPAALAARVERGERVLRALRHAMLRSQRRLEFGQVL 129
Query: 135 LGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCVSIPSS 193
L S+ S VG+LG V G+ SIA + ++ G + E+LI GL V+IP+
Sbjct: 130 LASIGSTAPFVGLLGTVWGIYHALGSIAVSGQAQIENVAGPVGEALIMTAFGLVVAIPAV 189
Query: 194 IAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+AYN ++ +++GFA + + Q
Sbjct: 190 LAYNILGRLVRQLTEELDGFARDLHVFVCAQP 221
>gi|15606982|ref|NP_214364.1| TolQ-like protein [Aquifex aeolicus VF5]
gi|2984223|gb|AAC07752.1| TolQ-like protein [Aquifex aeolicus VF5]
Length = 204
Score = 55.1 bits (131), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 81/171 (47%), Gaps = 15/171 (8%)
Query: 31 LFIFSILSWSVIIQKSVNFIT---LRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAI 87
L + SILSW VII+++VN L R E + L G + S H
Sbjct: 18 LILLSILSWYVIIERAVNLRVKNFLPRNLTEIKALISRGDYESALKISTVVDHP------ 71
Query: 88 FMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGI 147
F A+S + KG + + + R+M+ ++ + +I + L L + +S L+G+
Sbjct: 72 FTKAVSVTLEEYLKGKKE----KGYLIRLMEEELSALVPKIEKNLPILSTTASVAPLLGL 127
Query: 148 LGAVLGMMGFFQSIAGYYSNNVVSI--PGIIESLISILLGLCVSIPSSIAY 196
G + G++ FQ+ A +++ GI E L++ GL V+IP+ +AY
Sbjct: 128 FGTITGLIKVFQAYAITTQGEAMNLLAKGISEVLVAAATGLGVAIPALLAY 178
>gi|296160455|ref|ZP_06843271.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. Ch1-1]
gi|295889204|gb|EFG69006.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. Ch1-1]
Length = 236
Score = 55.1 bits (131), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 83/197 (42%), Gaps = 12/197 (6%)
Query: 30 LLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFM 89
+L SI SW +I KS +RQ FW +L +L+ +F
Sbjct: 24 VLLAMSIASWCFLIVKSWILTRAKRQATRAIAQFWQAPTLSEGVAALRRTDR---ERVFT 80
Query: 90 SAMSEWKKSCDKGARSPIGIQDRIDRMMDV--AIARELEEITEKLSF----LGSMSSAGL 143
P + R++R V A+ + L +L F L S+ S
Sbjct: 81 PLAE--AALHAAEVDIPGALLARVERGERVLRALRQALSASQRRLEFGQVLLASVGSTAP 138
Query: 144 LVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCVSIPSSIAYNKFIED 202
VG+LG V G+ SIA + ++ G + E+LI GL V+IP+ +AYN
Sbjct: 139 FVGLLGTVWGIYHALGSIAASGQAQIENVAGPVGEALIMTAFGLVVAIPAVLAYNVLGRL 198
Query: 203 SKKFAMQMEGFANEFSA 219
++ + +++GFA++ A
Sbjct: 199 VRQLSEELDGFAHDLHA 215
>gi|330880592|gb|EGH14741.1| biopolymer transport protein ExbB [Pseudomonas syringae pv.
morsprunorum str. M302280PT]
Length = 141
Score = 55.1 bits (131), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 66/135 (48%), Gaps = 11/135 (8%)
Query: 24 VKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCK-------SL 76
V ++ L +FS+LSW++++ KS ++ + Q ++F + FWS L T + +L
Sbjct: 10 VPAVLWALIVFSVLSWALLLIKSAQYVRQKSQNKQFTKAFWSAPDLLTAAEHSAQYPGAL 69
Query: 77 KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLG 136
N G A+ A+ E ++ + A + I DR++R + I +E + + L
Sbjct: 70 ARIANSGFEAM---AVDESPRTTQQLAHT-INRSDRLERNLRQQIQKERRALESGQAILA 125
Query: 137 SMSSAGLLVGILGAV 151
S+ S +G+ G V
Sbjct: 126 SIGSTAPFIGLFGTV 140
>gi|162452529|ref|YP_001614896.1| TolQ protein [Sorangium cellulosum 'So ce 56']
gi|161163111|emb|CAN94416.1| TolQ protein [Sorangium cellulosum 'So ce 56']
Length = 238
Score = 55.1 bits (131), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 105/235 (44%), Gaps = 17/235 (7%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQK-SVNFITLRRQF----------- 56
M ++ L+ MGL K I+ L I S+ S V+ ++ V+F++
Sbjct: 1 MQFTLTELWGHMGLFAKLIVFALAIMSVASLIVLGERLVVSFLSRAASRAFAARVGPMLA 60
Query: 57 REFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRM 116
R + W+ L GLAA SA S + R G+ + + R
Sbjct: 61 RGELEGAWTAARPGGESGYLGRVIGAGLAAYASSAPSRLPAQGHE--RD--GVFESVSRA 116
Query: 117 MDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGI 175
++ RE+ + L ++ S VG+LG V+G++ FQ +A S + ++ GI
Sbjct: 117 LERQAQREVLSLKRGYGLLATVGSTAPFVGLLGTVMGIVTAFQQMAASGSGGLGTVSAGI 176
Query: 176 IESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
E+LI+ GL V+IP+ + YN + A+ + +NE +++++ +G ++
Sbjct: 177 AEALITTAFGLIVAIPAVMGYNYLQGWVEARAIDISESSNELLDVVAKRLDGRLA 231
>gi|209517545|ref|ZP_03266385.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. H160]
gi|209502078|gb|EEA02094.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. H160]
Length = 239
Score = 54.7 bits (130), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 89/211 (42%), Gaps = 13/211 (6%)
Query: 17 FMQMGLAV-KCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKS 75
++Q G A+ + +L SI SW +I KS +RQ + FW +L
Sbjct: 10 YLQTGDALTHGVAYVLLAMSIASWCFLIVKSWILTRAKRQAKRAVARFWQAPTLAEGVAI 69
Query: 76 LKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDV--AIARELEEITEKLS 133
L+ +F P + R++R V A+ + L +L
Sbjct: 70 LRR---TDRERVFAPLAE--AALHAAEVDIPGALLARVERSERVLRALRQALNASQRRLE 124
Query: 134 F----LGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCV 188
F L S+ + VG+LG V G+ SIA + ++ G + E+LI GL V
Sbjct: 125 FGQVLLASVGATAPFVGLLGTVWGIYHALGSIAASGQAQIENVAGPVGEALIMTAFGLVV 184
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
+IP+ +AYN ++ + ++GFA++ A
Sbjct: 185 AIPAVLAYNVLGRLVRQLSEDLDGFAHDLHA 215
>gi|90424486|ref|YP_532856.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris BisB18]
gi|90106500|gb|ABD88537.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris BisB18]
Length = 655
Score = 54.7 bits (130), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 97/216 (44%), Gaps = 25/216 (11%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFW-SGQSLETVCK---------- 74
+I +L I ++SW V+I + + + R F + F S LE + +
Sbjct: 420 VVIGILAIMMVISWIVMIDRVSYLNRIAKGNRLFLKHFRESATDLEGLLQFDREETDASI 479
Query: 75 ----SLKNH---HNIGLAAIFMSAMSEWKK--SCDKGAR---SPIGIQDRIDRMMDVAIA 122
++H H+ L +F + E ++ S + G SP IQ I ++D
Sbjct: 480 AGKSDTQDHKAIHSAPLHRLFHIGVQEIRRRFSANGGGPRLLSPQAIQS-IRAVLDSGFI 538
Query: 123 RELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLIS 181
E + + + + L S G +G+LG V+G+M F +IA NV +I PGI +L++
Sbjct: 539 HETQRLNKMMVMLTIAISGGPFLGLLGTVVGVMITFAAIAASGDVNVNAIAPGIAAALVA 598
Query: 182 ILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEF 217
+ GL V+IP+ YN K +M+ F +E
Sbjct: 599 TVAGLAVAIPALFGYNYLTIRIKDSTNEMQVFVDEL 634
>gi|238021536|ref|ZP_04601962.1| hypothetical protein GCWU000324_01436 [Kingella oralis ATCC 51147]
gi|237868516|gb|EEP69522.1| hypothetical protein GCWU000324_01436 [Kingella oralis ATCC 51147]
Length = 219
Score = 54.7 bits (130), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 62/115 (53%), Gaps = 1/115 (0%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI 172
++R M +I + L + L ++ S VG+LG V G+ +I+ ++ ++
Sbjct: 105 LEREMRHSIGKILSRFEGGMMALATIGSTAPFVGLLGTVWGIYHALINISNSGQMSIAAV 164
Query: 173 PGII-ESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
G I E+L++ +GL +IP+ +AYN F+ +K + ++ GFA++F L + E
Sbjct: 165 AGPIGEALVATAVGLFAAIPAVLAYNVFMRGNKNLSRELHGFAHDFHVQLINEKE 219
>gi|254253257|ref|ZP_04946575.1| Biopolymer transport protein [Burkholderia dolosa AUO158]
gi|124895866|gb|EAY69746.1| Biopolymer transport protein [Burkholderia dolosa AUO158]
Length = 222
Score = 54.7 bits (130), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 90/212 (42%), Gaps = 3/212 (1%)
Query: 17 FMQMGLAV-KCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKS 75
+++ G A+ + +L SI SW ++ K+ + +RQ FW SL+ +
Sbjct: 10 YLESGDAITHAVAYVLLAMSIASWCFLLMKAWLLVRAKRQGPRALAAFWRASSLDAGIAA 69
Query: 76 LKNHHNIGL-AAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSF 134
L + + +A + + +R+ R + A+ R +
Sbjct: 70 LAGADRERVFVPLAEAARDAADDHDPAALAARVERSERVLRALRHAMLRSQRRLEFGQVL 129
Query: 135 LGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCVSIPSS 193
L S+ S VG+LG V G+ SIA + ++ G + E+LI GL V+IP+
Sbjct: 130 LASIGSTAPFVGLLGTVWGIYHALGSIAASGQAQIENVAGPVGEALIMTAFGLVVAIPAV 189
Query: 194 IAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+AYN ++ A +++GFA + + Q
Sbjct: 190 LAYNILGRLVRQLAEELDGFARDLHVFVCAQP 221
>gi|242277831|ref|YP_002989960.1| MotA/TolQ/ExbB proton channel [Desulfovibrio salexigens DSM 2638]
gi|242120725|gb|ACS78421.1| MotA/TolQ/ExbB proton channel [Desulfovibrio salexigens DSM 2638]
Length = 196
Score = 54.7 bits (130), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 61/105 (58%), Gaps = 3/105 (2%)
Query: 114 DRMMDVAIARE--LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVS 171
++ +V +A E L + +L FL ++++A L+G+LG VLGM+ F ++ + ++
Sbjct: 84 EKKHEVQLAGEEILFSLNRRLDFLATVATAAPLIGLLGTVLGMIQAFSRLSASGNVDITM 143
Query: 172 IP-GIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFAN 215
+ GI ++L++ GL V+IP+ IA+ F +K A M+ AN
Sbjct: 144 LAGGIWQALLTTAAGLSVAIPALIAHRWFCRQHEKAAYAMQHTAN 188
>gi|117619942|ref|YP_856517.1| MotA/TolQ/ExbB proton channel family protein [Aeromonas hydrophila
subsp. hydrophila ATCC 7966]
gi|117561349|gb|ABK38297.1| MotA/TolQ/ExbB proton channel family protein [Aeromonas hydrophila
subsp. hydrophila ATCC 7966]
Length = 251
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 81/166 (48%), Gaps = 8/166 (4%)
Query: 63 FW---SGQSLETVCKSLKNHHNIG-LAAIFMSAMSEWKKSCDKGARSPIGIQDR-IDRMM 117
FW S Q +E L G L ++A+++ ++ ++ +G D + R M
Sbjct: 62 FWQHDSVQEMERQLAHLPPQEAYGRLTGAALAAVAQLNRAEERAVSCKLGSPDEYLLRAM 121
Query: 118 DVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGI 175
AI +E + + L+FL S+ SA +G+ G V G+ +I AG S + V+ P +
Sbjct: 122 RRAITQERVRLEQGLAFLASVGSAAPFIGLFGTVWGIYHALLAIGAAGQSSLDKVAGP-V 180
Query: 176 IESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
E+LI GL V++P+ + YN F+ ++ +E F ++ +L
Sbjct: 181 GEALIMTGFGLAVALPAVLIYNFFVRRNRLRLAALEEFGHDLFTLL 226
>gi|83954608|ref|ZP_00963319.1| biopolymer transport protein ExbB [Sulfitobacter sp. NAS-14.1]
gi|83840892|gb|EAP80063.1| biopolymer transport protein ExbB [Sulfitobacter sp. NAS-14.1]
Length = 287
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 90/194 (46%), Gaps = 17/194 (8%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSV----IIQKSVNFITLRRQFREFEQLFWSGQ 67
S A+FM + VK ++ L I S+L +V I+Q S LRR +R+ + +G
Sbjct: 56 SPLAMFMGADIVVKAVMFGLAIASVLGLAVWAGKILQVSWANARLRRSYRKLAK---AGA 112
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
KS + A+ +A++E S + GI++R+ + A
Sbjct: 113 VKGAQAKSFSGP----MRAMIRAALAEIDIS---DGLNKAGIKERVASELSRIEAGAARA 165
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA--GYYSNNVVSIPGIIESLISILLG 185
+ LGS+ S +G+ G V G+M F IA G S VV+ PGI E+L++ +G
Sbjct: 166 MQSGAMILGSIGSTAPFIGLFGTVWGIMNSFIGIAESGSTSLTVVA-PGIAEALLATAIG 224
Query: 186 LCVSIPSSIAYNKF 199
L +IP+ + YN
Sbjct: 225 LVAAIPAVLLYNHI 238
>gi|225023691|ref|ZP_03712883.1| hypothetical protein EIKCOROL_00554 [Eikenella corrodens ATCC
23834]
gi|224943573|gb|EEG24782.1| hypothetical protein EIKCOROL_00554 [Eikenella corrodens ATCC
23834]
Length = 218
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 99/209 (47%), Gaps = 12/209 (5%)
Query: 16 LFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKS 75
+F Q + + + LL + S+L+W +II +S +R R + + SL+ + +
Sbjct: 6 VFAQGDIVLITVFLLLLLMSVLTWWIIIMRSFRLHQVRHANRGTIESVATVASLDDMLRL 65
Query: 76 LKNHHNIGLAAIFMSAMSEWKKSCDKGARS----PIG--IQDRIDRMMDVAIARELEEIT 129
K H + LA + +A+ ++ A P+G + I MD+A +
Sbjct: 66 AKAHPS-PLADLTEAAIQAARQYRANPASQLTSIPLGDYLVQHIRHKMDIA----KRGLN 120
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCV 188
L+ L S+ + +G+ G V G+ ++I+ N+ ++ G I E+L++ +GL
Sbjct: 121 GGLTILASVGATAPFIGLFGTVWGIYHALENISQQGQVNIATVAGPIGEALVATAVGLFA 180
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEF 217
+IP+ +AYN + +K+ M+ +A +
Sbjct: 181 AIPAVLAYNFIVFGNKQVVQDMDAYAYDL 209
>gi|224367131|ref|YP_002601294.1| TolQ3 [Desulfobacterium autotrophicum HRM2]
gi|223689847|gb|ACN13130.1| TolQ3 [Desulfobacterium autotrophicum HRM2]
Length = 478
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 47/73 (64%), Gaps = 1/73 (1%)
Query: 120 AIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIES 178
AI RE+ + LS LG +++ L+G+LG V GM+ F +I Y +++ + GI E+
Sbjct: 368 AILREIPPLERFLSTLGMLAAIAPLMGLLGTVTGMINTFHTITFYGTSDPRMMSGGISEA 427
Query: 179 LISILLGLCVSIP 191
L++ +LGLCV+IP
Sbjct: 428 LVTTMLGLCVAIP 440
>gi|330815525|ref|YP_004359230.1| hypothetical protein bgla_1g05810 [Burkholderia gladioli BSR3]
gi|327367918|gb|AEA59274.1| hypothetical protein bgla_1g05810 [Burkholderia gladioli BSR3]
Length = 232
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 83/191 (43%), Gaps = 5/191 (2%)
Query: 30 LLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLK--NHHNIGLAAI 87
LLF S+ SW ++ K+ +RQ FW S + +L+ + +
Sbjct: 24 LLFAMSVASWCFLLVKAWTLARAKRQGPGAIAAFWRAGSFDEGLAALRSADRERVFAPLA 83
Query: 88 FMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGI 147
+ + GAR G +R+ R + A+ + L L S++S VG+
Sbjct: 84 EAAREAADAAPSLLGARVERG--ERVLRAVRQAMRGSQRRLEFGLVLLASIASTAPFVGL 141
Query: 148 LGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCVSIPSSIAYNKFIEDSKKF 206
LG V G+ SIA + ++ G + E+LI GL V+IP+ +AYN ++
Sbjct: 142 LGTVWGIYHALGSIAESGQAQIGNVAGPVGEALIMTAFGLVVAIPAVLAYNLLGRLVRQL 201
Query: 207 AMQMEGFANEF 217
+ ++GFA +
Sbjct: 202 SEDLDGFARDL 212
>gi|115376995|ref|ZP_01464213.1| ExbB [Stigmatella aurantiaca DW4/3-1]
gi|310824471|ref|YP_003956829.1| MotA/TolQ/ExbB proton channel family protein [Stigmatella
aurantiaca DW4/3-1]
gi|115365973|gb|EAU64990.1| ExbB [Stigmatella aurantiaca DW4/3-1]
gi|309397543|gb|ADO75002.1| MotA/TolQ/ExbB proton channel family protein [Stigmatella
aurantiaca DW4/3-1]
Length = 233
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 58/116 (50%), Gaps = 6/116 (5%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQ-----SIAGYY 165
D ++ ++ +ARE + LSFLG++ + +G+ G VLG++ F S+ G
Sbjct: 106 DTVEEVIASTVARERPQYERYLSFLGTLGNNAPFIGLFGTVLGIIKAFHDLGTASVKGAA 165
Query: 166 SNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
V + GI E+L++ +GL V+IP+ +A+N F K + + A L
Sbjct: 166 IQETV-MAGISEALVATAVGLAVAIPAVVAFNVFNRQLKTLTSRTNALGHALVASL 220
>gi|78065214|ref|YP_367983.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. 383]
gi|77965959|gb|ABB07339.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. 383]
Length = 222
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 89/211 (42%), Gaps = 3/211 (1%)
Query: 17 FMQMGLAV-KCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKS 75
+++ G A+ + +L SI SW + K+ + +RQ FW SL+ +
Sbjct: 10 YLESGDAITHAVAYVLLAMSIASWCFLFMKAWLLVRAKRQGPRALAAFWRAPSLDAGIAA 69
Query: 76 LKNHHNIGL-AAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSF 134
L + + +A + + +R+ R + A+ R +
Sbjct: 70 LAGADRERVFVPLAEAARDAADDHDPAALAARVDRSERVLRALRHAMLRSQRRLEFGQVL 129
Query: 135 LGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCVSIPSS 193
L S+ S VG+LG V G+ SIA + ++ G + E+LI GL V+IP+
Sbjct: 130 LASIGSTAPFVGLLGTVWGIYHALGSIAASGQAQIENVAGPVGEALIMTAFGLVVAIPAV 189
Query: 194 IAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+AYN ++ A +++GFA + + Q
Sbjct: 190 LAYNILGRLVRQLAEELDGFARDLHVFVCAQ 220
>gi|319764772|ref|YP_004128709.1| mota/tolq/exbb proton channel [Alicycliphilus denitrificans BC]
gi|330826988|ref|YP_004390291.1| MotA/TolQ/ExbB proton channel [Alicycliphilus denitrificans K601]
gi|317119333|gb|ADV01822.1| MotA/TolQ/ExbB proton channel [Alicycliphilus denitrificans BC]
gi|329312360|gb|AEB86775.1| MotA/TolQ/ExbB proton channel [Alicycliphilus denitrificans K601]
Length = 217
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 83/194 (42%), Gaps = 8/194 (4%)
Query: 34 FSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMS 93
S+ SW VI+ K R FW SL + L L + A +
Sbjct: 24 MSVASWVVILWKLRLMWRARVDVPRSTAAFWQSPSLAAGLERLPPCDREALVLPLVRAAA 83
Query: 94 EWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSF----LGSMSSAGLLVGILG 149
+ +C G+ + + Q I + + A+ L + +L F L ++ S VG+LG
Sbjct: 84 Q--VAC-SGSGAALADQGAIAQRLTRALRDALHGVLGRLQFGQVLLATVGSTAPFVGLLG 140
Query: 150 AVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCVSIPSSIAYNKFIEDSKKFAM 208
V G+ ++AG + + G + E+L+ GL V+IP+ +AYN F +
Sbjct: 141 TVWGIHHALGALAGAEQITIERLAGPVGEALVMTAAGLSVAIPAVLAYNWFGRAIGRIEA 200
Query: 209 QMEGFANEFSAILS 222
+EGFA + +++
Sbjct: 201 DLEGFARDLRELVA 214
>gi|148553046|ref|YP_001260628.1| MotA/TolQ/ExbB proton channel [Sphingomonas wittichii RW1]
gi|148498236|gb|ABQ66490.1| MotA/TolQ/ExbB proton channel [Sphingomonas wittichii RW1]
Length = 241
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 92/231 (39%), Gaps = 40/231 (17%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YGL A Q G + +L + S SW ++ K + + Q +
Sbjct: 10 NPYGL-------MAALEQGGTIAWTVFIILVVMSAASWYIMFTKLIEQQKILNQGKRARA 62
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
FW SL+ L+ + S +++ D G + QD+ ++ D
Sbjct: 63 SFWQAPSLKDGQAKLEKN-------------SAYRQIVDDGLLA----QDQHTKLTDPVD 105
Query: 122 AREL-------------EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYS 166
E ++ L+ L ++ S +G+ G V+G+ I AG S
Sbjct: 106 QHEWLTGSLMRSQALINSKLGNGLAVLATVGSTSPFIGLFGTVIGIYRALIKIGAAGQAS 165
Query: 167 NNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEF 217
+ V+ P + E+LI LGL V++P+ + YN I +K A Q+ FA +
Sbjct: 166 IDAVAGP-VGEALIMTALGLAVAVPAVLGYNWLIRRNKVVAEQISAFATDL 215
>gi|58039740|ref|YP_191704.1| biopolymer transport ExbB protein [Gluconobacter oxydans 621H]
gi|58002154|gb|AAW61048.1| Biopolymer transport ExbB protein [Gluconobacter oxydans 621H]
Length = 366
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 104/231 (45%), Gaps = 31/231 (13%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQF---RE 58
N YGL AL+ + ++ ++ I S +W +++ K F+ R F +E
Sbjct: 129 NPYGLG-------ALWANGDAIARGVLIIMVIMSAGTWIIMVMK---FLEQGRLFAASKE 178
Query: 59 FEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRID--RM 116
+ FW+ S+ +LK A +E + ++D ID
Sbjct: 179 AAREFWTKPSVHDGAAALKPSSPFRYIAETGIVAAEHHEGS---------MRDSIDLPSW 229
Query: 117 MDVAIARELEEITEK----LSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVV 170
+++I+R ++ I + L+FLG++ S VG+ G V G+ +I +G S + V
Sbjct: 230 TEMSISRAVDTINTRMQGGLAFLGTVGSTSPFVGLFGTVWGIYHALTAIGISGQASIDKV 289
Query: 171 SIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+ P + ESLI +GL ++P+ + YN + +K ++ FA + ++L
Sbjct: 290 AGP-VGESLIMTAIGLATAVPAVLGYNLLVRRNKGAMDRVRNFAADIQSVL 339
>gi|169796151|ref|YP_001713944.1| putative biopolymer transport protein (EXBB-like) [Acinetobacter
baumannii AYE]
gi|215483605|ref|YP_002325826.1| MotA/TolQ/ExbB proton channel family protein [Acinetobacter
baumannii AB307-0294]
gi|301345168|ref|ZP_07225909.1| biopolymer transport protein ExbB [Acinetobacter baumannii AB056]
gi|301511294|ref|ZP_07236531.1| biopolymer transport protein ExbB [Acinetobacter baumannii AB058]
gi|301595464|ref|ZP_07240472.1| biopolymer transport protein ExbB [Acinetobacter baumannii AB059]
gi|169149078|emb|CAM86955.1| putative biopolymer transport protein (EXBB-like) [Acinetobacter
baumannii AYE]
gi|213985798|gb|ACJ56097.1| MotA/TolQ/ExbB proton channel family protein [Acinetobacter
baumannii AB307-0294]
Length = 211
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 101/195 (51%), Gaps = 17/195 (8%)
Query: 31 LFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS-LETVCKSLKNHHNIGLAAI-- 87
L + SIL+ ++ I++ F+ LRR + L G + + V +L+ N A+
Sbjct: 15 LILCSILTVAISIER---FVRLRRSQVLPKVLMNDGSADISVVITNLEQDTNAQSTALGN 71
Query: 88 FMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGI 147
+ A E ++ ++ AR+ M+ ++E+ + + ++FLG++S+ L+G+
Sbjct: 72 ILKAGFEHQEHGEQFARA----------QMEAMASQEISYLEKNINFLGTLSAIAPLLGL 121
Query: 148 LGAVLGMMGFFQSIA-GYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKF 206
LG V+G++ F I G + + IPGI ++LI+ +G+ ++IP+ I+Y F + +
Sbjct: 122 LGTVVGIIESFLVIDFGSAGSPSLMIPGISKALITTAVGMLIAIPALISYRYFQRVVQDY 181
Query: 207 AMQMEGFANEFSAIL 221
++E + F A L
Sbjct: 182 IAELEQQSTLFHASL 196
>gi|328953805|ref|YP_004371139.1| MotA/TolQ/ExbB proton channel [Desulfobacca acetoxidans DSM 11109]
gi|328454129|gb|AEB09958.1| MotA/TolQ/ExbB proton channel [Desulfobacca acetoxidans DSM 11109]
Length = 179
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 87/183 (47%), Gaps = 32/183 (17%)
Query: 31 LFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMS 90
+ + S+++ ++ I KS+ + +RR G+SLE +++ H + LA + +
Sbjct: 15 ILLCSVIALAITINKSIQYFRVRRDI---------GRSLE----AIQEHGSTYLAPVLQA 61
Query: 91 AMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGA 150
++ D DR + +A +REL+ + L L ++ L+G+ G
Sbjct: 62 V----QQGLD-------------DRQISLAGSRELKTLESGLGSLNLIAVIAPLLGLTGT 104
Query: 151 VLGMMGFFQSIAGYYSNNVVSI--PGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAM 208
V GM+ FQ IA +N S+ GI E+LI+ GL V IP+ +A + + A+
Sbjct: 105 VTGMIKAFQVIATMGTNVDPSLLAAGIWEALITTAAGLFVGIPTHVAAHYLDRSLDEVAL 164
Query: 209 QME 211
+M+
Sbjct: 165 RMK 167
>gi|254489089|ref|ZP_05102293.1| tonB-system energizer ExbB [Roseobacter sp. GAI101]
gi|214042097|gb|EEB82736.1| tonB-system energizer ExbB [Roseobacter sp. GAI101]
Length = 283
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 97/193 (50%), Gaps = 19/193 (9%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQK--SVNFITLRRQFREFEQLFWSGQSL 69
S A+FM + VK ++ L I S+L W+V K V + R + R +++L G +L
Sbjct: 56 SPLAMFMGADIVVKAVMFGLAIASVLGWTVWAGKLLQVKWANGRLR-RSYKRLAKQG-AL 113
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMM---DVAIARELE 126
E ++ + + + +A +E +S G + GI++R+ + + AR ++
Sbjct: 114 EGTDAAI---YAGPVRVMVQAAQAEVARS---GGMNKAGIKERVASELSRIETGAARSMQ 167
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA--GYYSNNVVSIPGIIESLISILL 184
LGS+ S +G+ G V G+M F IA G S +VV+ PGI E+L++ +
Sbjct: 168 S---GAMVLGSIGSTAPFIGLFGTVWGIMNSFIGIAESGSTSLSVVA-PGIAEALLATAI 223
Query: 185 GLCVSIPSSIAYN 197
GL +IP+ + YN
Sbjct: 224 GLVAAIPAVLLYN 236
>gi|184157920|ref|YP_001846259.1| biopolymer transport protein [Acinetobacter baumannii ACICU]
gi|239502203|ref|ZP_04661513.1| biopolymer transport protein [Acinetobacter baumannii AB900]
gi|260555201|ref|ZP_05827422.1| biopolymer transporter [Acinetobacter baumannii ATCC 19606]
gi|332872757|ref|ZP_08440723.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Acinetobacter baumannii 6014059]
gi|183209514|gb|ACC56912.1| Biopolymer transport protein [Acinetobacter baumannii ACICU]
gi|193077188|gb|ABO11980.2| MotA/TolQ/ExbB proton channel [Acinetobacter baumannii ATCC 17978]
gi|260411743|gb|EEX05040.1| biopolymer transporter [Acinetobacter baumannii ATCC 19606]
gi|322508239|gb|ADX03693.1| MotA/TolQ/ExbB proton channel [Acinetobacter baumannii 1656-2]
gi|323517865|gb|ADX92246.1| biopolymer transport protein [Acinetobacter baumannii TCDC-AB0715]
gi|332739054|gb|EGJ69915.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Acinetobacter baumannii 6014059]
Length = 211
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 101/195 (51%), Gaps = 17/195 (8%)
Query: 31 LFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS-LETVCKSLKNHHNIGLAAI-- 87
L + SIL+ ++ I++ F+ LRR + L G + + V +L+ N A+
Sbjct: 15 LILCSILTVAISIER---FVRLRRSQVLPKVLMNDGSADISVVITNLEQDTNAQSTALGN 71
Query: 88 FMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGI 147
+ A E ++ ++ AR+ M+ ++E+ + + ++FLG++S+ L+G+
Sbjct: 72 ILKAGFEHQEHGEQFARA----------QMEAMASQEISYLEKNINFLGTLSAIAPLLGL 121
Query: 148 LGAVLGMMGFFQSIA-GYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKF 206
LG V+G++ F I G + + IPGI ++LI+ +G+ ++IP+ I+Y F + +
Sbjct: 122 LGTVVGIIESFLVIDFGSAGSPSLMIPGISKALITTAVGMLIAIPALISYRYFQRVVQDY 181
Query: 207 AMQMEGFANEFSAIL 221
++E + F A L
Sbjct: 182 IAELEQQSTLFHASL 196
>gi|262197823|ref|YP_003269032.1| MotA/TolQ/ExbB proton channel [Haliangium ochraceum DSM 14365]
gi|262081170|gb|ACY17139.1| MotA/TolQ/ExbB proton channel [Haliangium ochraceum DSM 14365]
Length = 218
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 84/180 (46%), Gaps = 12/180 (6%)
Query: 22 LAVKCIITLLFIFSILSWSVIIQKSVNFITLRR-QFREFEQLFWSGQSLETVCKSLKNHH 80
L + ++ LL I SI+S V+I++ + F+ RR RE + V ++L +
Sbjct: 13 LGAEWVMWLLVILSIVSVGVMIER-ILFLRARRIDVRELSR---------EVARALDDDD 62
Query: 81 NIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSS 140
L + + + + +G D M+ R ++ L LG++ +
Sbjct: 63 LAPLKKKYTDSDAMAAQVAIRGLAERHHGTDAASEAMNSGKTRARKDYERYLVILGTLGN 122
Query: 141 AGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKF 199
+G+ G VLG++ FQ ++G V + GI E+L++ +GL V+IP+ +A+N F
Sbjct: 123 NAPFIGLFGTVLGIIQAFQDLSGNAQGGAEVVMGGISEALVATAIGLLVAIPAVVAFNYF 182
>gi|330991176|ref|ZP_08315129.1| Biopolymer transport protein exbB [Gluconacetobacter sp. SXCC-1]
gi|329761762|gb|EGG78253.1| Biopolymer transport protein exbB [Gluconacetobacter sp. SXCC-1]
Length = 295
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/232 (21%), Positives = 102/232 (43%), Gaps = 33/232 (14%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YGL AL+ + ++ ++ + S+ +W ++I K + + + +E +
Sbjct: 72 NPYGLG-------ALWSNGDFIARTVLLIMVVMSVGTWYIMIIKFLEQARIFKDVKEVKA 124
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDV-- 119
FW +I A + S ++ D G ++ + + +D+
Sbjct: 125 KFWPAA-------------DIRQGASQLDTASPFRYIADTGIKAAEHHEGTMQETIDLPS 171
Query: 120 ----AIARELEEITEKL----SFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNV 169
++ R ++ + +L +FLG++ S VG+ G V G+ +I AG S +
Sbjct: 172 WTALSLQRSVDFVQNRLQGGLAFLGTVGSTSPFVGLFGTVWGIYHALTAIGIAGQASIDK 231
Query: 170 VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
V+ P + ESLI +GL ++P+ + YN + +K ++ FA + +IL
Sbjct: 232 VAGP-VGESLIMTAIGLGTAVPAVLGYNMLVRRNKGALDEVRNFAADLQSIL 282
>gi|116328204|ref|YP_797924.1| biopolymer transport protein, TolQ-like [Leptospira borgpetersenii
serovar Hardjo-bovis L550]
gi|116330928|ref|YP_800646.1| biopolymer transport protein, TolQ-like [Leptospira borgpetersenii
serovar Hardjo-bovis JB197]
gi|116120948|gb|ABJ78991.1| Biopolymer transport protein, TolQ-like [Leptospira borgpetersenii
serovar Hardjo-bovis L550]
gi|116124617|gb|ABJ75888.1| Biopolymer transport protein, TolQ-like [Leptospira borgpetersenii
serovar Hardjo-bovis JB197]
Length = 201
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 100/200 (50%), Gaps = 20/200 (10%)
Query: 21 GLAVKCIITLLFIFSILSWSVIIQKSVNFITLRR----QFREFEQLFWSGQSLETVCKSL 76
+ + + ++ + SI+ +++II++ + F + +R ++LF ++ T L
Sbjct: 12 AIPPESVPIVIVLVSIIGFTIIIERLIYFSKWKPIPLDDWRSLKELF-RQKNWNTAIDYL 70
Query: 77 KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLG 136
K+ +N G + + + A E + A + M+ A+ L+ + LS LG
Sbjct: 71 KSMNN-GPSVLVLQAGIESSLKNLEAAE---------EEMLSAGFAQILK-MERFLSGLG 119
Query: 137 SMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAY 196
++++ L+G+LG VLG++ F+ +G V GI E+LI+ +GL ++IP+ +AY
Sbjct: 120 TIATISPLLGVLGTVLGIIRSFEEGSGTRGAEV----GISEALITTAMGLAIAIPAYVAY 175
Query: 197 NKFIEDSKKFAMQMEGFANE 216
N F + + +ME + +
Sbjct: 176 NYFQKKKEDTIAEMENLSGQ 195
>gi|285016830|ref|YP_003374541.1| biopolymer transport protein [Xanthomonas albilineans GPE PC73]
gi|283472048|emb|CBA14555.1| probable biopolymer transport protein [Xanthomonas albilineans]
Length = 253
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 86/198 (43%), Gaps = 7/198 (3%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHH----- 80
++ L S SW + L+ Q LFW + + ++++
Sbjct: 44 VVLVTLITMSASSWYWTVINIFRATRLKSQADRVTSLFWDTPNAQDAIRAMEEQPASEPF 103
Query: 81 -NIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMS 139
I L A +A + + G + + +DR + A+ RE ++ ++ L ++
Sbjct: 104 SKIALDAAQAAAHHQRSEGTGAGLGETLSRSEFVDRALRQAVTRESTKLQSGMTLLATVG 163
Query: 140 SAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCVSIPSSIAYNK 198
+ VG+LG V G+ G I S ++ ++ G + E+LI +GL V+IP+ A+N
Sbjct: 164 ACAPFVGLLGTVWGIYGALIKIGATGSASIDAVAGPVGEALIMTAIGLFVAIPAVFAFNF 223
Query: 199 FIEDSKKFAMQMEGFANE 216
F + + + + FA++
Sbjct: 224 FSKVNSSVIAKFDTFAHD 241
>gi|313203663|ref|YP_004042320.1| outer membrane transport energization protein exbb [Paludibacter
propionicigenes WB4]
gi|312442979|gb|ADQ79335.1| outer membrane transport energization protein ExbB [Paludibacter
propionicigenes WB4]
Length = 273
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 105/223 (47%), Gaps = 20/223 (8%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSV----IIQKSVNFITLRRQFR 57
NN+ L D ++ + G V I TLL ++L+ SV I+ + L + +
Sbjct: 51 NNHPL---DGNLLGTVYKGGFIVPIIQTLLL--TVLALSVERFFAIKSAQGKGNLAKFVQ 105
Query: 58 EFEQLFWSGQ--SLETVCKSLKNH-HNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRID 114
E + G +C K N+ +A+ A E K+ K + + IQ ++
Sbjct: 106 EIKTALTKGDIAGATAICDKQKGSVGNVVTSALVKYAEVEEDKTLSK-EQQILAIQKEVE 164
Query: 115 RMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP- 173
A A EL +++ L + ++++ G L+G+LG V+GM+ F S+AG + +++
Sbjct: 165 E----ATALELPMLSQNLPVIATITTLGTLMGLLGTVIGMIRSFASLAGAGGTDSMALSQ 220
Query: 174 GIIESLISILLGLCVSIPSSIAYNKFIE--DSKKFAMQMEGFA 214
GI E+LI+ G+ + I+YN F DS F++ GF+
Sbjct: 221 GISEALINTAFGIATGALAVISYNYFTSKIDSLTFSIDEVGFS 263
>gi|163746897|ref|ZP_02154254.1| biopolymer transport protein [Oceanibulbus indolifex HEL-45]
gi|161380011|gb|EDQ04423.1| biopolymer transport protein [Oceanibulbus indolifex HEL-45]
Length = 277
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 90/197 (45%), Gaps = 19/197 (9%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSV----NFITLRRQFREFEQLFWS 65
++S +FM VK ++ L S L W + + + + LRR++R ++
Sbjct: 38 EMSPLGMFMAADWVVKGVMLSLLFASALVWVIFVARVLILRWERGALRRRYRALDRAGSL 97
Query: 66 GQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDR----IDRMMDVAI 121
+ E K G+ + A + + +GA GI++R I R+ +
Sbjct: 98 VAAREIFAK------RKGVMGQMVRAAERERATTGEGAALKPGIKERAGSEIARI-EAGA 150
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLI 180
AR + L+ +GS + VG+ G V G+M F SI+ + N+ + PGI E+L+
Sbjct: 151 ARRMGHGAGVLAIVGSTAP---FVGLFGTVWGIMNSFISISESNTTNLAIVAPGIAEALL 207
Query: 181 SILLGLCVSIPSSIAYN 197
+ +GL +IP+ I YN
Sbjct: 208 ATAIGLVAAIPAVIFYN 224
>gi|90415822|ref|ZP_01223755.1| MotA/TolQ/ExbB proton channel family protein [marine gamma
proteobacterium HTCC2207]
gi|90332196|gb|EAS47393.1| MotA/TolQ/ExbB proton channel family protein [marine gamma
proteobacterium HTCC2207]
Length = 209
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 56/99 (56%), Gaps = 1/99 (1%)
Query: 120 AIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIES 178
A A+ + E+ L+ L ++++ L+G+LG VLGM+ F I + + N + GI ++
Sbjct: 99 AAAQVVHELERFLTLLSTIANMAPLIGLLGTVLGMIQVFADIMLFGTGNAADLAGGISQA 158
Query: 179 LISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEF 217
LI+ GL ++IP+ I++ F + +Q+EG A +
Sbjct: 159 LITTAAGLTIAIPAMISHRYFERHVESLVVQLEGQATKL 197
>gi|88857265|ref|ZP_01131908.1| putative Tol protein [Pseudoalteromonas tunicata D2]
gi|88820462|gb|EAR30274.1| putative Tol protein [Pseudoalteromonas tunicata D2]
Length = 455
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 53/88 (60%), Gaps = 1/88 (1%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
D ++ + AI RE+ +IT L+F+ +S L+G+LG V GM+ FQ+I + + +
Sbjct: 339 DTLELKLSEAILREMPKITRNLTFIKIISVVAPLLGLLGTVTGMINTFQAITLFGTGDPK 398
Query: 171 SIP-GIIESLISILLGLCVSIPSSIAYN 197
+ GI ++L++ +LGL V+IP+ Y
Sbjct: 399 LMAGGISQALVTTVLGLVVAIPTVFVYT 426
>gi|206561712|ref|YP_002232477.1| putative transport-related membrane protein [Burkholderia
cenocepacia J2315]
gi|198037754|emb|CAR53698.1| putative transport-related membrane protein [Burkholderia
cenocepacia J2315]
Length = 222
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 90/211 (42%), Gaps = 3/211 (1%)
Query: 17 FMQMGLAVKCIIT-LLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKS 75
+++ G A+ ++ +L S+ SW + K+ I +RQ FW SL+ +
Sbjct: 10 YLESGDAITHAVSYVLLAMSVASWCFLFMKAWLLIRAKRQGPRALAAFWRAPSLDAGIAA 69
Query: 76 LKNHHNIGL-AAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSF 134
L + + +A + + +R+ R + A+ R +
Sbjct: 70 LAGADRERVFVPLAEAARDAADDHDPAALAARVERSERVLRALRHAMLRSQRRLEFGQVL 129
Query: 135 LGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCVSIPSS 193
L S+ S VG+LG V G+ SIA + ++ G + E+LI GL V+IP+
Sbjct: 130 LASIGSTAPFVGLLGTVWGIYHALGSIAASGQAQIENVAGPVGEALIMTAFGLVVAIPAV 189
Query: 194 IAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+AYN ++ A +++GFA + + Q
Sbjct: 190 LAYNILGRLVRQLAEELDGFARDLHVFVCAQ 220
>gi|307728041|ref|YP_003911254.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. CCGE1003]
gi|307588566|gb|ADN61963.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. CCGE1003]
Length = 246
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 89/198 (44%), Gaps = 5/198 (2%)
Query: 24 VKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIG 83
+ I L S+ SW V++ K++ L + + FW+ Q+L +SL +
Sbjct: 17 TRFIFVTLLAMSVASWIVLLTKAIANRRLEAIGKRAQTRFWATQNLNEGLESLGKSADNP 76
Query: 84 LAAIFMSA--MSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSA 141
A+ ++ ++ + + + +G + + R + A E + L+ LGS+ S
Sbjct: 77 YRALVVAGREANDQQGASQSVMQGSLGSGEWVARGLRNAFDEEAARLQNGLAVLGSIGST 136
Query: 142 GLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKF 199
VG+ G V G+ +I +G S + V+ P + ESLI GL V+IP+ + +N
Sbjct: 137 APFVGLFGTVWGIYHALMAIGLSGQASLDHVAGP-VGESLIMTAFGLFVAIPAVLGFNYV 195
Query: 200 IEDSKKFAMQMEGFANEF 217
+ + ++ F +E
Sbjct: 196 NRGNTRVRQRLHRFMHEL 213
>gi|167842102|ref|ZP_02468786.1| MotA/TolQ/ExbB proton channel [Burkholderia thailandensis MSMB43]
Length = 246
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 93/203 (45%), Gaps = 2/203 (0%)
Query: 24 VKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL-ETVCKSLKNHHNI 82
V+ + L +FSI +W++II K++ + R + +L E + L+
Sbjct: 10 VQGALWALGLFSIATWTIIIVKTIQHVRAARADDRASAVLADANNLREIAARPLQAGPKA 69
Query: 83 GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAG 142
+ + A+++ + QD ++R + I E + L++L S+ S
Sbjct: 70 RVTQAALDALADAHAFAGETPEDLWSRQDTLERQLARQIGHERRRLEHALAWLASVGSVA 129
Query: 143 LLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCVSIPSSIAYNKFIE 201
VG+ G V G++ +I+ S ++ + G I E+L++ +G+ V++P+ +AYN F+
Sbjct: 130 PFVGLFGTVFGIINALGAISHAASASIAVVAGPIGEALVATGIGIAVAVPAVLAYNIFVR 189
Query: 202 DSKKFAMQMEGFANEFSAILSRQ 224
K ++ A + A+ R
Sbjct: 190 RVKVVVALLDDHAGDLYALAQRD 212
>gi|332851805|ref|ZP_08433730.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Acinetobacter baumannii 6013150]
gi|332865815|ref|ZP_08436599.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Acinetobacter baumannii 6013113]
gi|332729812|gb|EGJ61147.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Acinetobacter baumannii 6013150]
gi|332735027|gb|EGJ66112.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Acinetobacter baumannii 6013113]
Length = 211
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 101/195 (51%), Gaps = 17/195 (8%)
Query: 31 LFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS-LETVCKSLKNHHNIGLAAI-- 87
L + SIL+ ++ I++ F+ LRR + L G + + V +L+ N A+
Sbjct: 15 LILCSILTVAISIER---FVRLRRSQVLPKVLMNDGSADISVVITNLEQDTNAQSTALGN 71
Query: 88 FMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGI 147
+ A E ++ ++ AR+ M+ ++E+ + + ++FLG++S+ L+G+
Sbjct: 72 ILKAGFEHQEYGEQFARA----------QMEAMASQEISYLEKNINFLGTLSAIAPLLGL 121
Query: 148 LGAVLGMMGFFQSIA-GYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKF 206
LG V+G++ F I G + + IPGI ++LI+ +G+ ++IP+ I+Y F + +
Sbjct: 122 LGTVVGIIESFLVIDFGSAGSPSLMIPGISKALITTAVGMLIAIPALISYRYFQRVVQDY 181
Query: 207 AMQMEGFANEFSAIL 221
++E + F A L
Sbjct: 182 IAELEQQSTLFHASL 196
>gi|325265637|ref|ZP_08132327.1| TonB family auxiliary protein ExbB [Kingella denitrificans ATCC
33394]
gi|324982907|gb|EGC18529.1| TonB family auxiliary protein ExbB [Kingella denitrificans ATCC
33394]
Length = 219
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/218 (21%), Positives = 101/218 (46%), Gaps = 6/218 (2%)
Query: 14 FALFMQMGLAVKCIITLLFI-FSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
L Q G V + L I SI +W VI+ +S+ + ++ + WS ++L
Sbjct: 3 LGLVFQQGDPVLIGVFLFLISMSICTWCVIVLRSIRHVAAKKANAAASEAIWSSKTLAGA 62
Query: 73 CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGI---QDRIDRMMDVAIARELEEIT 129
K+ K + ++ + + A++ ++ D + G + ++R + + ++ +
Sbjct: 63 EKAAKQTPS-PISELTLDALTAQRRFRDGSLQQLSGSLPEPEFLEREVRHSASKIMSRFE 121
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCV 188
++ L ++ S +G+LG V G+ +I+ ++ + G I E+L++ +GL V
Sbjct: 122 GGMTALATIGSTAPFIGLLGTVWGIYHALINISKSGQMSIAEVSGPIGEALVATAVGLFV 181
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ +AYN F +K + + +A++ L E
Sbjct: 182 AIPAVLAYNCFSRGNKNLSRTLHNYAHDLHVQLINHKE 219
>gi|91788912|ref|YP_549864.1| MotA/TolQ/ExbB proton channel [Polaromonas sp. JS666]
gi|91698137|gb|ABE44966.1| outer membrane transport energization protein ExbB [Polaromonas sp.
JS666]
Length = 238
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 84/207 (40%), Gaps = 4/207 (1%)
Query: 16 LFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKS 75
++ Q + K + LL S+ SW VII K+++ I ++ R E FW +
Sbjct: 10 VWSQGDIVTKSVALLLLAMSLASWMVIIIKTLDLIKYKKIARAAED-FWHSEDFAAGLTK 68
Query: 76 LKNHHNIGLAAIFMSAMSE--WKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLS 133
L + + ++ + + D + R + I + L+
Sbjct: 69 LGADPTNPFRQLALEGREATLHHRNTKAHLHDALDVSDWVTRTLRNTIDEFTARLQSGLA 128
Query: 134 FLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCVSIPS 192
L S+ S +G+ G V G+ SI + + G I ESLI LGL V+IP+
Sbjct: 129 VLASVGSTAPFIGLFGTVWGIYHALLSIGAAGQATIDKVAGPIGESLIMTALGLAVAIPA 188
Query: 193 SIAYNKFIEDSKKFAMQMEGFANEFSA 219
+ YN + +K ++ FA++ A
Sbjct: 189 VLGYNALVRGNKGILQKLSRFAHDLHA 215
>gi|218780982|ref|YP_002432300.1| MotA/TolQ/ExbB proton channel [Desulfatibacillum alkenivorans
AK-01]
gi|218762366|gb|ACL04832.1| MotA/TolQ/ExbB proton channel [Desulfatibacillum alkenivorans
AK-01]
Length = 240
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 94/208 (45%), Gaps = 8/208 (3%)
Query: 24 VKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIG 83
V+ ++ +L FS W++I K + + +F + FW ++ K N
Sbjct: 2 VQFVLFVLLSFSAACWTIIGLKIRQLWLAKNETAQFVEFFWKSGNMAKSYAKAKQLTNSP 61
Query: 84 LAAIFMSAMSEW---KKSCDKGARSP---IGIQDRIDRMMDVAIARELEEITEKLSFLGS 137
+A + A E +S G +G D I R + A EL +T+ + FL +
Sbjct: 62 VARAYRVAYMEMVRINQSSGNGQNQEGFSMGT-DNIKRALRRANVSELTRLTQWVPFLAT 120
Query: 138 MSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAY 196
+ + +G+ G V G+M F I + + V PGI E+L++ GL +IP+ +AY
Sbjct: 121 IGNTAPFIGLFGTVWGIMSAFHGIGQRGTATLAVVAPGISEALVATAAGLAAAIPAVMAY 180
Query: 197 NKFIEDSKKFAMQMEGFANEFSAILSRQ 224
N F + Q+ FA++F ++ R+
Sbjct: 181 NHFTSRIRVAESQLNNFASDFINVVERE 208
>gi|162448919|ref|YP_001611286.1| putative transport transmembrane protein, tolQ [Sorangium
cellulosum 'So ce 56']
gi|161159501|emb|CAN90806.1| putative transport transmembrane protein, tolQ [Sorangium
cellulosum 'So ce 56']
Length = 246
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 80/180 (44%), Gaps = 16/180 (8%)
Query: 27 IITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAA 86
++ LL +IL W + + K + L FEQ S + + + H + A
Sbjct: 34 VVWLLIFAAILVWVIAVLKVLQLARLASLQARFEQESAHAHSPDQLFALAQRHADAPGAR 93
Query: 87 IFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVG 146
+ M E + +G +D + AI E + + + L S+++A +G
Sbjct: 94 VVM----ELSRR--------VGTSRLLDSIAKRAIVTETQRASALMPTLSSIAAASPFIG 141
Query: 147 ILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAY---NKFIED 202
+ G V G+M F I S ++ V P I E+LI+ +GL +IP+ IAY NK ++D
Sbjct: 142 LFGTVYGIMDAFLRIGQQKSASLPVVAPAIGEALIATAIGLFAAIPAVIAYNGINKRVDD 201
>gi|115525465|ref|YP_782376.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris BisA53]
gi|115519412|gb|ABJ07396.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris BisA53]
Length = 687
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 53/102 (51%), Gaps = 1/102 (0%)
Query: 117 MDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGI 175
+D +E + + + L S G +G+LG V+G+M F +IA NV +I PGI
Sbjct: 561 LDSGYVKETQRLNRLMVLLTIAISGGPFLGLLGTVVGVMITFAAIAQSGDVNVNAIAPGI 620
Query: 176 IESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEF 217
+L++ + GL V+IP+ YN I K M+ F +EF
Sbjct: 621 AAALVATVAGLFVAIPALFGYNYLISRIKDLTSDMQVFIDEF 662
>gi|260753733|ref|YP_003226626.1| MotA/TolQ/ExbB proton channel [Zymomonas mobilis subsp. mobilis
NCIMB 11163]
gi|258553096|gb|ACV76042.1| MotA/TolQ/ExbB proton channel [Zymomonas mobilis subsp. mobilis
NCIMB 11163]
Length = 247
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 93/215 (43%), Gaps = 23/215 (10%)
Query: 17 FMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSL 76
Q G ++ +L + S SW VI K + Q RE FW+ SL+ K L
Sbjct: 20 LQQGGAPTWTVLIILVLMSAASWYVIFTKLWEQHRVLVQSREVGAAFWNAPSLKDAAKKL 79
Query: 77 KNHHNIGLAAIFMSAMSEWKKSCDKGARSP---IGIQDRIDRM--MDVAIARELEEITEK 131
+ + + +++ + G + + I + ID+ ++ ++ R + I +
Sbjct: 80 EEN-------------TAYRQIVEDGLDADTQYVKIPNAIDQHEWLNDSLERSVGSINAR 126
Query: 132 L----SFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGL 186
L + L ++ + VG+ G V G+ G I ++ + G + E+LI +GL
Sbjct: 127 LGSGLAILATVGATSPFVGLFGTVNGIYGALVQIGASGQASIGKVAGPVGEALIMTSIGL 186
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
V++P+ + YN +K A ++ FA + A L
Sbjct: 187 AVAVPAVLGYNWLSRRNKTIAERIGSFAIDVHAYL 221
>gi|170738847|ref|YP_001767502.1| MotA/TolQ/ExbB proton channel [Methylobacterium sp. 4-46]
gi|168193121|gb|ACA15068.1| MotA/TolQ/ExbB proton channel [Methylobacterium sp. 4-46]
Length = 211
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 87/195 (44%), Gaps = 22/195 (11%)
Query: 9 MDISIF---ALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS 65
MD + F A+F Q GLA + +I L S W +I++ LRR R E+
Sbjct: 1 MDAATFSPSAMFFQAGLAGRAVILTLVASSAWCWVLILESLYTTAKLRRSLRGLER---- 56
Query: 66 GQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
G+ V L+ G A + E SP +Q R M+ A AR +
Sbjct: 57 GE----VPDLLRPVVEAGRQAAALVLPEE----------SPGEVQRRTAAAMERAAARAM 102
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILL 184
S L ++S VG+LG V G+M F SIA ++ V PGI E+L + +
Sbjct: 103 TATEGGYSHLAVIASVAPFVGLLGTVWGIMNSFISIADAKDTSLAVVAPGIAEALATTAI 162
Query: 185 GLCVSIPSSIAYNKF 199
GL +IP+++A+ +
Sbjct: 163 GLIAAIPAAVAHGRL 177
>gi|326317083|ref|YP_004234755.1| MotA/TolQ/ExbB proton channel [Acidovorax avenae subsp. avenae ATCC
19860]
gi|323373919|gb|ADX46188.1| MotA/TolQ/ExbB proton channel [Acidovorax avenae subsp. avenae ATCC
19860]
Length = 297
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 99/226 (43%), Gaps = 21/226 (9%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YG A++ + K + +L I S SW VII K + + Q R +
Sbjct: 76 NPYGFK-------AMWEHGDMVSKGTLFILLIMSATSWYVIITKLLEQRRVHGQARLVQA 128
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
FW+ L T ++L + +++F ++E K P+ Q + + ++
Sbjct: 129 DFWNRGDLRTSTQALPD------SSVFRY-VAEAGLIAQKQYEGPLTQQVDRNSWLSQSV 181
Query: 122 ARELEEITEK----LSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGI 175
+ ++ + ++ L+ L ++ S VG+ G V G+ +I AG S + V+ P +
Sbjct: 182 MQAIDAVGDRLQGGLAVLATVGSTAPFVGLFGTVWGIYHALTAIGLAGQASIDKVAGP-V 240
Query: 176 IESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
E+LI +GL ++P+ + YN + +K ++ F E L
Sbjct: 241 GEALIMTAIGLAAAVPAVLGYNWLVRRNKAALDEVRDFGTELHTSL 286
>gi|330955557|gb|EGH55817.1| biopolymer transport protein ExbB [Pseudomonas syringae Cit 7]
Length = 139
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 65/133 (48%), Gaps = 11/133 (8%)
Query: 24 VKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCK-------SL 76
V ++ L +FS+LSW++++ KS ++ + Q ++F + FWS L T + +L
Sbjct: 10 VPAVLWALILFSVLSWALLLIKSAQYVRQKSQNKQFTKAFWSAPDLLTAAEHSAQYPGAL 69
Query: 77 KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLG 136
N G A+ A+ E ++ + A + I DR++R + I +E + + L
Sbjct: 70 ARIANSGFEAM---AVDESPRTTQQLAHT-INRSDRLERNLRQQIQKERRALESGQAILA 125
Query: 137 SMSSAGLLVGILG 149
S+ S +G+ G
Sbjct: 126 SIGSTAPFIGLFG 138
>gi|56552612|ref|YP_163451.1| MotA/TolQ/ExbB proton channel protein [Zymomonas mobilis subsp.
mobilis ZM4]
gi|241762143|ref|ZP_04760226.1| MotA/TolQ/ExbB proton channel [Zymomonas mobilis subsp. mobilis
ATCC 10988]
gi|56544186|gb|AAV90340.1| MotA/TolQ/ExbB proton channel [Zymomonas mobilis subsp. mobilis
ZM4]
gi|241373393|gb|EER62993.1| MotA/TolQ/ExbB proton channel [Zymomonas mobilis subsp. mobilis
ATCC 10988]
Length = 247
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 93/215 (43%), Gaps = 23/215 (10%)
Query: 17 FMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSL 76
Q G ++ +L + S SW VI K + Q RE FW+ SL+ K L
Sbjct: 20 LQQGGAPTWTVLIILVLMSAASWYVIFTKLWEQHRVLVQSREVGAAFWNAPSLKDAAKKL 79
Query: 77 KNHHNIGLAAIFMSAMSEWKKSCDKGARSP---IGIQDRIDRM--MDVAIARELEEITEK 131
+ + + +++ + G + + I + ID+ ++ ++ R + I +
Sbjct: 80 EEN-------------TAYRQIVEDGLDADTQYVKIPNAIDQHEWLNDSLERSVGSINAR 126
Query: 132 L----SFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGL 186
L + L ++ + VG+ G V G+ G I ++ + G + E+LI +GL
Sbjct: 127 LGSGLAILATVGATSPFVGLFGTVNGIYGALVQIGASGQASIGKVAGPVGEALIMTSIGL 186
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
V++P+ + YN +K A ++ FA + A L
Sbjct: 187 AVAVPAVLGYNWLSRRNKTIAERIGSFAIDVHAYL 221
>gi|91785205|ref|YP_560411.1| MotA/TolQ/ExbB proton channel family protein [Burkholderia
xenovorans LB400]
gi|91689159|gb|ABE32359.1| MotA/TolQ/ExbB proton channel family protein [Burkholderia
xenovorans LB400]
Length = 236
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 84/204 (41%), Gaps = 12/204 (5%)
Query: 30 LLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFM 89
+L SI SW +I KS +RQ FW +L +L+ +F
Sbjct: 24 VLLAMSIASWCFLIVKSWILTRAKRQATRAIAQFWQAPTLSEGVAALRRADR---ERVFT 80
Query: 90 SAMSEWKKSCDKGARSPIGIQDRIDRMMDV--AIARELEEITEKLSF----LGSMSSAGL 143
P + R++R V A+ + L +L F L S+ S
Sbjct: 81 PLAE--AALHAAEVDIPGALLARVERSERVLRALRQALNASQRRLEFGQVLLASVGSTAP 138
Query: 144 LVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCVSIPSSIAYNKFIED 202
VG+LG V G+ SIA + ++ G + E+LI GL V+IP+ +AYN
Sbjct: 139 FVGLLGTVWGIYHALGSIAASGQAQIENVAGPVGEALIMTAFGLVVAIPAVLAYNVLGRL 198
Query: 203 SKKFAMQMEGFANEFSAILSRQTE 226
+ + +++GFA++ A + E
Sbjct: 199 VLQLSEELDGFAHDLHAYVCAPAE 222
>gi|213157114|ref|YP_002319159.1| MotA/TolQ/ExbB proton channel [Acinetobacter baumannii AB0057]
gi|213056274|gb|ACJ41176.1| MotA/TolQ/ExbB proton channel [Acinetobacter baumannii AB0057]
Length = 211
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 101/195 (51%), Gaps = 17/195 (8%)
Query: 31 LFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS-LETVCKSLKNHHNIGLAAI-- 87
L + SIL+ ++ I++ F+ LRR + L G + + V +L+ N A+
Sbjct: 15 LILCSILTVAISIER---FVRLRRSQVLPKVLMNDGSADISVVITNLEQDTNAQSTALGN 71
Query: 88 FMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGI 147
+ A E ++ ++ AR+ M+ ++E+ + + ++FLG++S+ L+G+
Sbjct: 72 ILKAGFEHQEHGEQFARA----------QMEAMASQEISYLEKNINFLGTLSAIAPLLGL 121
Query: 148 LGAVLGMMGFFQSIA-GYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKF 206
LG V+G++ F I G + + IPGI ++LI+ +G+ ++IP+ I+Y F + +
Sbjct: 122 LGTVVGIIESFWFIDFGSAGSPSLMIPGISKALITTAVGMLIAIPALISYRYFQRVVQDY 181
Query: 207 AMQMEGFANEFSAIL 221
++E + F A L
Sbjct: 182 IAELEQQSTLFHASL 196
>gi|2632265|emb|CAB08609.1| exbB [Xanthomonas campestris]
Length = 253
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/198 (20%), Positives = 83/198 (41%), Gaps = 7/198 (3%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHH----- 80
++ L S SW + L+ FW + + ++++
Sbjct: 44 VVLITLIAMSAASWYWTVINIFRATRLKSAADRVTTAFWDAPNAQDAIRAMEEQPASEPF 103
Query: 81 -NIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMS 139
I L A A + + G + + +DR + A+ RE ++ ++ L ++
Sbjct: 104 SKIALDAAQARAHHQRAEGSTGGMGESLSRSEFVDRALRQAVTRESTKLQSGMTLLATVG 163
Query: 140 SAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCVSIPSSIAYNK 198
+ VG+LG V G+ G I S ++ ++ G + E+LI +GL V+IP+ A+N
Sbjct: 164 ATAPFVGLLGTVWGIYGALIKIGATGSASIDAVAGPVGEALIMTAIGLFVAIPAVFAFNF 223
Query: 199 FIEDSKKFAMQMEGFANE 216
F + + + + FA++
Sbjct: 224 FSKVNSSVIAKFDTFAHD 241
>gi|260550093|ref|ZP_05824307.1| biopolymer transporter [Acinetobacter sp. RUH2624]
gi|260406848|gb|EEX00327.1| biopolymer transporter [Acinetobacter sp. RUH2624]
Length = 211
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 101/195 (51%), Gaps = 17/195 (8%)
Query: 31 LFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS-LETVCKSLKNHHNIGLAAI-- 87
L + SIL+ ++ I++ FI LRR + L G + + + +L+ + A+
Sbjct: 15 LILCSILTVAISIER---FIRLRRSQVLPKALMSDGSADISHIITNLEQDTDASSTALGN 71
Query: 88 FMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGI 147
+ A E ++ ++ AR+ M+ ++E+ + + ++FLG++S+ L+G+
Sbjct: 72 ILKAGFEHQEHGEQFARA----------QMEAMASQEISYLEKNINFLGTLSAIAPLLGL 121
Query: 148 LGAVLGMMGFFQSIA-GYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKF 206
LG V+G++ F I G + + IPGI ++LI+ +G+ ++IP+ I+Y F + +
Sbjct: 122 LGTVVGIIESFLVIDFGSAGSPSLMIPGISKALITTAVGMLIAIPALISYRYFQRVVQNY 181
Query: 207 AMQMEGFANEFSAIL 221
++E + F A L
Sbjct: 182 IAELEQQSTLFHASL 196
>gi|332296238|ref|YP_004438161.1| MotA/TolQ/ExbB proton channel [Thermodesulfobium narugense DSM
14796]
gi|332179341|gb|AEE15030.1| MotA/TolQ/ExbB proton channel [Thermodesulfobium narugense DSM
14796]
Length = 171
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 50/93 (53%), Gaps = 5/93 (5%)
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV---VSIPGIIESLISIL 183
+ ++L F ++ S +G+ G VLG+M F +A +S + + + GI E+L S
Sbjct: 76 NLNKRLGFFATVGSNAPFIGLFGTVLGIMKAFHDLA--FSQDFGVRIVMNGIAEALSSTA 133
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANE 216
LGL V++P IAYN F+ ++ + E AN
Sbjct: 134 LGLFVAVPCVIAYNYFVRKARDLSYIYEEHANN 166
>gi|294010717|ref|YP_003544177.1| biopolymer transport protein ExbB [Sphingobium japonicum UT26S]
gi|292674047|dbj|BAI95565.1| biopolymer transport protein ExbB [Sphingobium japonicum UT26S]
Length = 252
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 95/227 (41%), Gaps = 24/227 (10%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YGL Q G + +L S+ ++ ++ K + + Q ++
Sbjct: 15 NPYGL-------MEALEQGGTIAWTVFIILCGMSVGTFYILFTKLIEQQKVINQGKKVRA 67
Query: 62 LFWSGQSL-ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVA 120
FW SL E K KN + + A E K D P+ D + +
Sbjct: 68 TFWRAASLKEGTAKLEKNSAYKQIVDDGIKAQEEHTKLTD-----PVEAHD----WLHGS 118
Query: 121 IARELEEITEKL----SFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPG 174
+AR I KL +FL ++ S +G+ G V+G+ I AG S + V+ P
Sbjct: 119 LARSEASINSKLGGGLAFLATVGSTSPFIGLFGTVIGIYRALIKIGAAGQASIDAVAGP- 177
Query: 175 IIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+ E+LI LGL V++P+ +AYN +K A Q+ GF + A L
Sbjct: 178 VGEALIMTALGLAVAVPAVLAYNFLQRRNKSIAEQLNGFTVDLLAHL 224
>gi|85375577|ref|YP_459639.1| biopolymer transport ExbB protein [Erythrobacter litoralis
HTCC2594]
gi|84788660|gb|ABC64842.1| biopolymer transport ExbB protein [Erythrobacter litoralis
HTCC2594]
Length = 263
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 97/215 (45%), Gaps = 34/215 (15%)
Query: 18 MQMGLAVKCII-TLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSL 76
M+ G A+ I +L I SI S+ ++I K + + +Q++ FW +L+ L
Sbjct: 25 MEQGGAIAWFIFGVLVIMSIGSFYILITKLLEQNKIMKQYKGVRTSFWKAPTLKDGATKL 84
Query: 77 KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL---------EE 127
+ S W++ D ++ + +M D A + +
Sbjct: 85 DKN-------------SAWRQIVDDAMKA----DEDHGKMADQREAHDYLHGSLQASEDS 127
Query: 128 ITEKLS----FLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLIS 181
I KL+ FL S+ + +G+LG V+G+ +I AG S + V+ P + E+LI
Sbjct: 128 INAKLAGGLPFLASVGATAPFIGLLGTVIGIYRALINIGLAGSASIDKVAGP-VGEALIM 186
Query: 182 ILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANE 216
+GL V++P+ +AYN +++ A + GF+ +
Sbjct: 187 TAIGLLVAVPAVLAYNWLQSRNRRIAELLTGFSTD 221
>gi|88810579|ref|ZP_01125836.1| MotA/TolQ/ExbB proton channel family protein [Nitrococcus mobilis
Nb-231]
gi|88792209|gb|EAR23319.1| MotA/TolQ/ExbB proton channel family protein [Nitrococcus mobilis
Nb-231]
Length = 262
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 93/191 (48%), Gaps = 16/191 (8%)
Query: 27 IITLLFIFSILSWSVIIQKSVNFITL----RRQFREFEQLFWSGQSLETVCKSLKNHHNI 82
++ +L SI++ +++ K F +L RR RE +L+ G+ E V + ++ + +
Sbjct: 31 VVVILGFMSIIALTILFLKLWQFRSLQLGDRRTAREMLRLYRGGRGKEAVALACRSRNPV 90
Query: 83 GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAG 142
A + A+ ++S AR +++ + R+ A +LE + L ++S
Sbjct: 91 --AQVLALAIRGRRRSELSEAR----VREEVVRVA----ADQLEALRSYFRPLEVIASLA 140
Query: 143 LLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFI 200
L+G+ G VLGM+ FQ + AG + + GI E+L++ +GL V+IP + N
Sbjct: 141 PLLGLFGTVLGMITAFQQLQQAGNQVDPAILSGGIWEALLTTAVGLGVAIPVVVVINWLE 200
Query: 201 EDSKKFAMQME 211
+ A +M+
Sbjct: 201 RKIDRLAHEMQ 211
>gi|117926836|ref|YP_867453.1| MotA/TolQ/ExbB proton channel [Magnetococcus sp. MC-1]
gi|117610592|gb|ABK46047.1| outer membrane transport energization protein ExbB [Magnetococcus
sp. MC-1]
Length = 203
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 79/176 (44%), Gaps = 24/176 (13%)
Query: 41 VIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLK---NHHNIGLAAIFMSAMSEWKK 97
+I+ K+V TL + R + VC+ K +H ++ L ++
Sbjct: 33 IILYKAVQLSTLVHRMR----------TCYLVCQQGKMDASHPDLAL----------YQP 72
Query: 98 SCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGF 157
D R+P +R++ + + LSFL S+S+A +G+LG V G+M
Sbjct: 73 LLDFYQRNPSAQHSDQERLLGQLLKTRRLHLENGLSFLASVSAAAPFIGLLGTVWGIMHA 132
Query: 158 FQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEG 212
Q + S ++ + G + E+L++ LGL +IP+ + YN + K+ +EG
Sbjct: 133 LQGLGSENSASLALVAGPVAEALVATALGLFAAIPALLGYNLLVRLLKRLMGYVEG 188
>gi|332524698|ref|ZP_08400897.1| putative transport-related membrane protein [Rubrivivax
benzoatilyticus JA2]
gi|332108006|gb|EGJ09230.1| putative transport-related membrane protein [Rubrivivax
benzoatilyticus JA2]
Length = 217
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 89/199 (44%), Gaps = 13/199 (6%)
Query: 25 KCIITLLFIFSILSWSVIIQKSVNFITLRR---QFREFEQLFWSGQSLETVCKSLKNHHN 81
+ + LLF S+ +W +I+ KS + LRR R FW S+ ++
Sbjct: 16 RIVALLLFTMSVAAWLLIVWKS---LLLRRAGADIRRAVPAFWDAASVADGRARVQAMDR 72
Query: 82 IG-LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSS 140
G L + +A++ +GA + ++ R+ R + A+ R L + L S+ S
Sbjct: 73 EGVLLPLVDAAVAPAAGGTLEGAAA---LEARLTRRLRDALHRGLAHLQFGQVILASIGS 129
Query: 141 AGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNK 198
VG+ G V + I AG + V+ P + E+L+ G+ V++P+ +AYN
Sbjct: 130 TAPFVGLFGTVWAIHHALTGIGDAGTLTIERVAGP-VGEALVMTAAGIAVAVPAVLAYNA 188
Query: 199 FIEDSKKFAMQMEGFANEF 217
+ ++EGFA++
Sbjct: 189 LGKRVAACEAELEGFAHDL 207
>gi|282890323|ref|ZP_06298851.1| hypothetical protein pah_c016o025 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|281499705|gb|EFB41996.1| hypothetical protein pah_c016o025 [Parachlamydia acanthamoebae str.
Hall's coccus]
Length = 241
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 59/105 (56%), Gaps = 1/105 (0%)
Query: 121 IARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYS-NNVVSIPGIIESL 179
+ ++++++ + L FL ++ S +G+LG V G++ F + G + + + + G+ +L
Sbjct: 130 VTQQIKQLEKNLFFLSTIVSLAPFLGLLGTVWGILMTFSELHGNAAGTHQMVLGGLSMAL 189
Query: 180 ISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+ +LGL +IP+ + YN F MQ+EGFANE A + Q
Sbjct: 190 ATTVLGLIDAIPALVGYNYLKNRFHDFEMQLEGFANEILASVEMQ 234
>gi|298370159|ref|ZP_06981475.1| biopolymer transport protein ExbB [Neisseria sp. oral taxon 014
str. F0314]
gi|298281619|gb|EFI23108.1| biopolymer transport protein ExbB [Neisseria sp. oral taxon 014
str. F0314]
Length = 219
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 104/217 (47%), Gaps = 4/217 (1%)
Query: 14 FALFMQMG-LAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL-ET 71
AL Q G + + +L I SI++WS+II +++ + ++L + +L E
Sbjct: 3 LALVFQSGDFVLISVFIILVIMSIVTWSIIILRAIRLRKAKNGNAAVKKLVLASFTLNEA 62
Query: 72 VCKSLKNHHNIG-LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
V K+ +G L + A +++S K + + + + + + ++++ + +
Sbjct: 63 VQKAKSVDSPMGRLTEEAVKAHQNYRQSDAKLLANALPLNEYLVTQIRNSMSQIMRQFDG 122
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCVS 189
++ L S+ + +G+ G V G+ +I+ ++ ++ G I E+L+S GL V+
Sbjct: 123 GMTSLASIGATAPFIGLFGTVWGIYHALINISQSGQMSIAAVAGPIGEALVSTAAGLFVA 182
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
IP+ +AYN +K + M+ +A++ L Q +
Sbjct: 183 IPAVLAYNFLNRSTKTLSQDMDAYAHDLHVRLLNQKD 219
>gi|189220458|ref|YP_001941098.1| biopolymer transport protein [Methylacidiphilum infernorum V4]
gi|189187316|gb|ACD84501.1| Biopolymer transport protein [Methylacidiphilum infernorum V4]
Length = 177
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 71/149 (47%), Gaps = 14/149 (9%)
Query: 73 CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE----I 128
CK L N A F A +KS K I I ++ +++ AI RE+ +
Sbjct: 23 CKELVNMS----AGSFPPAEGFSEKSLLK-----IKISEKSLKLIQSAIEREIGNQLLLL 73
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLC 187
E++ L + +S +G+LG V G+M F +A + ++ PG+ SL+S ++GL
Sbjct: 74 EEQMILLATAASGAPFIGLLGTVWGVMDAFGELALSGKATLATMAPGVSGSLLSTVMGLV 133
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANE 216
V+IP+ YN + K + +E F E
Sbjct: 134 VAIPALFGYNFIVASLKALTIDLENFGTE 162
>gi|24215020|ref|NP_712501.1| biopolymer transport protein TolQ [Leptospira interrogans serovar
Lai str. 56601]
gi|45657493|ref|YP_001579.1| biopolymer transport protein [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|24196067|gb|AAN49519.1| biopolymer transport protein TolQ [Leptospira interrogans serovar
Lai str. 56601]
gi|45600732|gb|AAS70216.1| biopolymer transport protein [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
Length = 201
Score = 52.4 bits (124), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 51/85 (60%), Gaps = 4/85 (4%)
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIP 191
LS LG++++ L+G+LG VLG++ F+ +G V GI E+LI+ +GL ++IP
Sbjct: 115 LSGLGTIATISPLLGVLGTVLGIIRSFEEGSGTRGAEV----GISEALITTAMGLAIAIP 170
Query: 192 SSIAYNKFIEDSKKFAMQMEGFANE 216
+ +AYN F + + +ME + +
Sbjct: 171 AYVAYNYFQKKKEDTIAEMENLSGQ 195
>gi|330991100|ref|ZP_08315054.1| Biopolymer transport protein exbB [Gluconacetobacter sp. SXCC-1]
gi|329761921|gb|EGG78411.1| Biopolymer transport protein exbB [Gluconacetobacter sp. SXCC-1]
Length = 350
Score = 52.4 bits (124), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 101/232 (43%), Gaps = 33/232 (14%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YGL AL+ + ++ ++ S+ +W ++I K + ++
Sbjct: 112 NPYGLG-------ALWANGDFIARGVLLIMVFMSLGTWYIMITKFFEQARVMAAAKQVMT 164
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDV-- 119
FW+ S++ +L A S ++ D G ++ + + +D+
Sbjct: 165 DFWTKGSIKEGAAALP-------------ANSPFRYIADTGVKAAEHHEGTMQESIDLHS 211
Query: 120 ----AIARELEEITEKL----SFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNV 169
+I R ++ I KL +FLG++ S VG+ G V G+ +I AG S +
Sbjct: 212 WTTMSIQRSVDVIQTKLQGGLAFLGTVGSTSPFVGLFGTVWGIYHALTAIGIAGQASIDK 271
Query: 170 VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
V+ P + ESLI +GL ++P+ + YN + +K ++ FA + +IL
Sbjct: 272 VAGP-VGESLIMTAIGLGTAVPAVLGYNLLVRRNKGAIDKVRNFAADVQSIL 322
>gi|95931354|ref|ZP_01314067.1| MotA/TolQ/ExbB proton channel [Desulfuromonas acetoxidans DSM 684]
gi|95132597|gb|EAT14283.1| MotA/TolQ/ExbB proton channel [Desulfuromonas acetoxidans DSM 684]
Length = 184
Score = 52.4 bits (124), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 91/187 (48%), Gaps = 22/187 (11%)
Query: 31 LFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMS 90
L + S+L W++I+ K +TL+ +R +S + + + L N + L+ +
Sbjct: 4 LAVVSLLLWALIVHK---LVTLKALYRPT-------KSEDHMVRVLDNAGHAVLSGVQGQ 53
Query: 91 AMSEW--KKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGIL 148
+ E+ ++S D S I +D +A++ LE L+ +G +++ L+G+L
Sbjct: 54 LIREFFRRRSGDAQLDSHI-----VDEA-SMAVSHPLER---GLTLIGVLAAIAPLLGLL 104
Query: 149 GAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISILLGLCVSIPSSIAYNKFIEDSKKFA 207
G V+GM+ F SIA + + N ++ GI E+LI+ GL ++IP N +
Sbjct: 105 GTVVGMIATFNSIAVFGTGNARAMAGGISEALITTQTGLLIAIPGLYMRNFLQRRAGNLK 164
Query: 208 MQMEGFA 214
Q+E A
Sbjct: 165 HQVESLA 171
>gi|330975324|gb|EGH75390.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. aptata str.
DSM 50252]
Length = 77
Score = 52.4 bits (124), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 34/52 (65%)
Query: 173 PGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
PGI E+LI+ +GL +IP+ IAYN+F S+ + FA+EF AIL R+
Sbjct: 20 PGIAEALIATAIGLFAAIPAVIAYNRFAARSETLISRYYTFADEFQAILHRK 71
>gi|220932018|ref|YP_002508926.1| MotA/TolQ/ExbB proton channel [Halothermothrix orenii H 168]
gi|219993328|gb|ACL69931.1| MotA/TolQ/ExbB proton channel [Halothermothrix orenii H 168]
Length = 216
Score = 52.4 bits (124), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 90/187 (48%), Gaps = 21/187 (11%)
Query: 31 LFIFSILSWSVIIQKSVNFITLR----RQFREFEQLFWSGQSLETVCKSLKNHHNIGLAA 86
L I SI +VI++K + F R R ++ E L G L T LK A
Sbjct: 20 LIIASIFGVAVILEKLIFFARYRDNSFRLIKKIELLVEEGDIL-TALNELKGERGPN-AK 77
Query: 87 IFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVG 146
+ +A++ S + G RI ++ E++++ + L L +++ L+G
Sbjct: 78 LLSTALAHH--SEEPG---------RIKEVLQAVGEDEIKKMEKHLPILDVIATVSPLLG 126
Query: 147 ILGAVLGMMGFFQ---SIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDS 203
+LG V+G++ F + AG + + +S GI E+LIS LGL ++IP+++ Y+ F
Sbjct: 127 LLGTVMGIISSFNIMGAAAGAANPHQIS-AGIAEALISTALGLIIAIPTAVFYSYFANKV 185
Query: 204 KKFAMQM 210
+ A +M
Sbjct: 186 ENKAHEM 192
>gi|238026213|ref|YP_002910444.1| hypothetical protein bglu_1g05440 [Burkholderia glumae BGR1]
gi|237875407|gb|ACR27740.1| Hypothetical protein bglu_1g05440 [Burkholderia glumae BGR1]
Length = 229
Score = 52.4 bits (124), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 90/212 (42%), Gaps = 14/212 (6%)
Query: 17 FMQMGLAV-KCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKS 75
++ G AV + LL S+ SW ++ K+ + RR FW S + +
Sbjct: 10 YLASGDAVTHAVAYLLLAMSVASWCCLLLKAWTLVRARRASAGAIAAFWRAGSFDAGLAA 69
Query: 76 LKNHHN----IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEK 131
L+ + LAA +A E + + + +R+ R + A+ +
Sbjct: 70 LRAADRERVFVPLAAAADAAARE-AAAGAALLGARVAPGERVLRAVREAMRGSQRRLEFG 128
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCVSI 190
L L S++S VG+LG V G+ SIA + S+ G + E+LI GL V+I
Sbjct: 129 LVLLASIASTAPFVGLLGTVWGIYHALGSIAASGQAQIGSVAGPVGEALIMTAFGLVVAI 188
Query: 191 PSSIAYN-------KFIEDSKKFAMQMEGFAN 215
P+ +AYN + +ED FA + FA
Sbjct: 189 PAVLAYNMLGRLVRQLVEDLDGFARDLHAFAG 220
>gi|262477953|gb|ACY68246.1| ExbB [Lysobacter enzymogenes]
Length = 249
Score = 52.4 bits (124), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 57/106 (53%), Gaps = 1/106 (0%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI 172
+DR + A+ RE + L+ L ++ S VG+LG V G+ + +++ ++
Sbjct: 127 VDRALRQAVTRESSRLEAGLTVLATVGSTAPFVGLLGTVWGIYHALLRLGASGESSIQAV 186
Query: 173 PGII-ESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEF 217
G + E+LI +GL V+IP+ +AYN F+ ++ + + FA++
Sbjct: 187 AGPVGEALIMTAIGLFVAIPAVLAYNFFVRLNRVTNNKFDTFAHDL 232
>gi|329114782|ref|ZP_08243539.1| Biopolymer transport protein ExbB [Acetobacter pomorum DM001]
gi|326695913|gb|EGE47597.1| Biopolymer transport protein ExbB [Acetobacter pomorum DM001]
Length = 300
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 95/207 (45%), Gaps = 23/207 (11%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YGL AL+ + + ++ ++ I S+ +W ++I K + L +E +
Sbjct: 100 NPYGLG-------ALWSNGDIIARGVLLIMLIMSLGTWYIMITKFIEQARLFAAAKEATK 152
Query: 62 LFWSGQSLETVCKSLKNH---HNIGLAAIFMSAMSE--WKKSCDKGARSPIGIQDRIDRM 116
FW+ S++ +L + I I + E ++S D + + + IQ ++ +
Sbjct: 153 SFWTKHSIQEGASALTSTSPFRYIADTGIVAAEHHEGTMQESIDLHSWTGMSIQRAVNNI 212
Query: 117 MDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQS--IAGYYSNNVVSIPG 174
+ + + L+FLG++ S +G+ G V G+ + IAG S + V+ P
Sbjct: 213 QN--------SLQKGLAFLGTVGSTSPFIGLFGTVWGIYHALTAIGIAGQASIDKVAGP- 263
Query: 175 IIESLISILLGLCVSIPSSIAYNKFIE 201
+ ESLI +GL ++P+ + YN +
Sbjct: 264 VGESLIMTAIGLATAVPAVLGYNLLVR 290
>gi|254521942|ref|ZP_05133997.1| biopolymer transport ExbB protein [Stenotrophomonas sp. SKA14]
gi|219719533|gb|EED38058.1| biopolymer transport ExbB protein [Stenotrophomonas sp. SKA14]
Length = 253
Score = 52.0 bits (123), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 92/204 (45%), Gaps = 9/204 (4%)
Query: 22 LAVKCIITL-LFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNH- 79
AV ++ L L + S +SW + + L+ LFW + + ++++
Sbjct: 38 FAVSWVVLLTLIVMSAMSWYWTVINIFRSVRLKSAADRVVSLFWDTPNAQDAIRAMEEQP 97
Query: 80 --HNIGLAAIFMSAMSEWKKSCDKGARSPIG----IQDRIDRMMDVAIARELEEITEKLS 133
A+ + + + + GA +G + +DR + A+ RE ++ ++
Sbjct: 98 ASEPFSKIALDAAQAAAHHQRAEGGATGGVGENLSRSEFVDRALRQAVTRESNKLQSGMT 157
Query: 134 FLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCVSIPS 192
L ++ + VG+LG V G+ G I S ++ ++ G + E+LI +GL V+IP+
Sbjct: 158 LLATVGATAPFVGLLGTVWGIYGALIKIGATGSASIDAVAGPVGEALIMTAIGLFVAIPA 217
Query: 193 SIAYNKFIEDSKKFAMQMEGFANE 216
A+N F + + + + FA++
Sbjct: 218 VFAFNFFSKVNSATISKFDTFAHD 241
>gi|296114418|ref|ZP_06833072.1| MotA/TolQ/ExbB proton channel [Gluconacetobacter hansenii ATCC
23769]
gi|295979179|gb|EFG85903.1| MotA/TolQ/ExbB proton channel [Gluconacetobacter hansenii ATCC
23769]
Length = 255
Score = 52.0 bits (123), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 104/232 (44%), Gaps = 33/232 (14%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YGL AL+ + ++ ++ + S+ +W ++I K + + + + +
Sbjct: 34 NPYGLG-------ALWSNGDFIARTVLLIMVVMSVGTWYIMISKFLEQARILKDAKIMKT 86
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKG---ARSPIG-IQDRID--R 115
FW+ +++ + M A S ++ G A G +Q+ ID
Sbjct: 87 DFWTKPTIQAGSDA-------------MPASSPFRYIAQTGITAAEHHEGTMQEAIDLHS 133
Query: 116 MMDVAIARELEEITEKL----SFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNV 169
++I R +E + +L +FLG++ S VG+ G V G+ +I AG S +
Sbjct: 134 WTTMSILRSVELVQTRLQGGLAFLGTVGSTSPFVGLFGTVWGIYHALTAIGIAGNASIDK 193
Query: 170 VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
V+ P + ESLI +GL ++P+ + YN + +K ++ FA + ++L
Sbjct: 194 VAGP-VGESLIMTAIGLGTAVPAVLGYNLLVRRNKGAMDEVRNFAADVQSVL 244
>gi|198277582|ref|ZP_03210113.1| hypothetical protein BACPLE_03804 [Bacteroides plebeius DSM 17135]
gi|198270080|gb|EDY94350.1| hypothetical protein BACPLE_03804 [Bacteroides plebeius DSM 17135]
Length = 239
Score = 52.0 bits (123), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 56/105 (53%), Gaps = 2/105 (1%)
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI--PGIIESLIS 181
E+ ++ LS + ++SS ++G LG V GM+ F ++A +N +++ GI E++I+
Sbjct: 134 EVAKLENGLSIMATISSGAPMLGFLGTVTGMVRAFWNMANAGNNIDITLLSSGIYEAMIT 193
Query: 182 ILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+ GL V I + AYN + K QME F +L+ TE
Sbjct: 194 TVGGLVVGIATMFAYNHLVYRVDKVVSQMEARTLAFMDLLNEPTE 238
>gi|158521749|ref|YP_001529619.1| MotA/TolQ/ExbB proton channel [Desulfococcus oleovorans Hxd3]
gi|158510575|gb|ABW67542.1| MotA/TolQ/ExbB proton channel [Desulfococcus oleovorans Hxd3]
Length = 576
Score = 52.0 bits (123), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 58/113 (51%), Gaps = 3/113 (2%)
Query: 108 GIQDR--IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYY 165
G DR ++ + AI E+ + LS LG +++ L+G+LG V GM+ F I Y
Sbjct: 452 GQMDRESMENALQEAILNEVPRLERFLSTLGLLAAIAPLLGLLGTVTGMIQTFHVITYYG 511
Query: 166 SNNVVSIP-GIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEF 217
+ + + GI E+L++ +LGLCV+IP + + + QME A F
Sbjct: 512 TGDARMLSGGISEALVTTMLGLCVAIPLMLGHTLLTRKVETLIGQMEEKAVAF 564
>gi|331019521|gb|EGH99577.1| TonB system transport protein ExbB [Pseudomonas syringae pv.
lachrymans str. M302278PT]
Length = 131
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 57/119 (47%), Gaps = 6/119 (5%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHH----N 81
+I LL IFS+ +W + + K V F L+ Q R+F + FW+ SL++ + +
Sbjct: 14 AVIWLLVIFSVATWGLALLKGVQFSRLKAQDRKFHKQFWAASSLDSAAQLAQEQPGAAAR 73
Query: 82 IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSS 140
+ LA + + ++ D I QDR++R + I RE + L+ L S+ S
Sbjct: 74 VALAGYAAIQVPDGAQANDLS--QSINHQDRLERALRQQIVRERRSLETGLAILASIGS 130
>gi|296390952|ref|ZP_06880427.1| transport protein ExbB2 [Pseudomonas aeruginosa PAb1]
Length = 311
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 102/202 (50%), Gaps = 12/202 (5%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS-GQSLETVCK----SLKNHH 80
II +L + + SW ++ +K+ N + R F + F G LE + + + H
Sbjct: 85 VIIAILALMMVQSWVIMYRKNQNVGRVSRANGLFRERFAEVGTRLELLADDRELAARLQH 144
Query: 81 NIGLAAIFMSAMSEWKKSCDKGARSP---IGIQDRIDRMMDVAIARELEEITEKLSFLGS 137
+ L ++ A+ E + ++GA + + I MD +E +++ +LS L +
Sbjct: 145 S-SLWRLYQVAVKEIRTRREQGADTSSVSAATIEAIRASMDGVRTKENQQLGSRLSSLSN 203
Query: 138 MSSAGLLVGILGAVLGMMGFF--QSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIA 195
+ G +G+LG VLG+M F ++AG + N ++ PG+ +L++ +GL V+IP+
Sbjct: 204 AIAGGPYIGLLGTVLGIMVVFLGTAMAGDVNINAIA-PGMAAALLATAMGLFVAIPALFG 262
Query: 196 YNKFIEDSKKFAMQMEGFANEF 217
YN+ + +K+ + M F +EF
Sbjct: 263 YNRLVTRNKEVSADMRVFVDEF 284
>gi|254786466|ref|YP_003073895.1| MotA/TolQ/ExbB proton channel [Teredinibacter turnerae T7901]
gi|237685694|gb|ACR12958.1| MotA/TolQ/ExbB proton channel [Teredinibacter turnerae T7901]
Length = 208
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 51/88 (57%), Gaps = 1/88 (1%)
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISIL 183
+ ++ L LG++++ L+G+LG V+GM+ F ++ + N ++ G I E+LI+
Sbjct: 100 IHDMERYLGALGTIAAIAPLLGLLGTVIGMINVFTALNLEGTGNAGALAGGISEALITTA 159
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQME 211
GLCV+IP+ IA+ F+ + ME
Sbjct: 160 AGLCVAIPAMIAHRFFVRRVDTLVVTME 187
>gi|104781908|ref|YP_608406.1| solvent/drug/ferric siderophore transport protein ExbB [Pseudomonas
entomophila L48]
gi|95110895|emb|CAK15611.1| putative solvent/drug/ferric siderophore transport protein ExbB
[Pseudomonas entomophila L48]
Length = 601
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 99/201 (49%), Gaps = 10/201 (4%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS-GQSLETVCKSLKNHHNI-- 82
II +L + + SW ++++K + +F + F + G LE H +
Sbjct: 371 VIIAVLVLMMVQSWVIMLRKQRALSRVTAANAQFREHFATVGTRLEQFADDQGLHQRLQG 430
Query: 83 -GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRM---MDVAIARELEEITEKLSFLGSM 138
L +++ A+ E + +GA + + I+ + MD RE + ++ KLS L +
Sbjct: 431 SSLWRLYLVAVQELRTRRAQGADTTLVSAATIEAIRCSMDGVRTRENQVLSAKLSTLSNA 490
Query: 139 SSAGLLVGILGAVLGMMGFF--QSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAY 196
+ G +G+LG VLG+M F ++AG + N ++ PG+ +L++ +GL V+IP+ Y
Sbjct: 491 IAGGPYIGLLGTVLGIMVVFLGTAMAGDVNINAIA-PGMAAALLATAMGLFVAIPALFGY 549
Query: 197 NKFIEDSKKFAMQMEGFANEF 217
N+ +++ M F +EF
Sbjct: 550 NRLTTRNREVGADMRVFVDEF 570
>gi|145219972|ref|YP_001130681.1| MotA/TolQ/ExbB proton channel [Prosthecochloris vibrioformis DSM
265]
gi|145206136|gb|ABP37179.1| Cell division and transport-associated protein TolQ [Chlorobium
phaeovibrioides DSM 265]
Length = 220
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 102/213 (47%), Gaps = 7/213 (3%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
I I L Q G V ++ +L +FS+ SW++I+ K + + + F F+ S +
Sbjct: 6 IGIIDLLFQAGPVVLFVLVVLLLFSVGSWAIILYKFGAVRSSMNESKAFLDCFFESGSAD 65
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQD--RIDRMMDVAIARELEEI 128
+ + N L+ +F +A E + A SP + D RI R + E + +
Sbjct: 66 RIFSESEKFRNGSLSKVFRAAYIENRAV----AASPGAVDDRLRIARAVKREANLEAKRL 121
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
+ + FL ++ + +G+ G V G+M FQ+I S ++ V PGI E+L++ GL
Sbjct: 122 SSLVPFLATVGNTAPFIGLFGTVWGIMSAFQNIGLVQSASLAVVAPGISEALVATAAGLA 181
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAI 220
+IP+ + YN F + +E FA EF A+
Sbjct: 182 AAIPAVMGYNYFSQQIGIIERDLEEFAPEFVAV 214
>gi|171463474|ref|YP_001797587.1| MotA/TolQ/ExbB proton channel [Polynucleobacter necessarius subsp.
necessarius STIR1]
gi|171193012|gb|ACB43973.1| MotA/TolQ/ExbB proton channel [Polynucleobacter necessarius subsp.
necessarius STIR1]
Length = 201
Score = 51.6 bits (122), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 85/186 (45%), Gaps = 3/186 (1%)
Query: 16 LFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKS 75
L+++ + + +L SI++W +++ + + LR+ E EQ FW S E +S
Sbjct: 10 LWLEGDAITRFVALILLTCSIVTWVILLTRLWDLRNLRKLKPELEQ-FWRATSFEQDLQS 68
Query: 76 LKN-HHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSF 134
N ++ I +A S + + + + + + + R + +I + + L+F
Sbjct: 69 FSNPYYQIAKSASKASLHHQNQSTNHRELLQTLNYSEWMSRSVKNSIDAIAAGLQKGLTF 128
Query: 135 LGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCVSIPSS 193
LGS + VG+ G V G+ SI+ S + + G I E LI LGL V+IP+
Sbjct: 129 LGSTGAISPFVGLFGTVWGIYHALISISSSGSVQIDQVAGPIGEVLIMTALGLAVAIPAI 188
Query: 194 IAYNKF 199
+ +
Sbjct: 189 LGFTPL 194
>gi|258646833|ref|ZP_05734302.1| domain protein, MotA/TolQ/ExbB proton channel family [Dialister
invisus DSM 15470]
gi|260404270|gb|EEW97817.1| domain protein, MotA/TolQ/ExbB proton channel family [Dialister
invisus DSM 15470]
Length = 237
Score = 51.6 bits (122), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 51/100 (51%)
Query: 123 RELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISI 182
R L +++ L +LG + ++G+LG + GMMG F S+ G N G+ E+LI+
Sbjct: 136 RYLNQLSAHLDYLGVIIGLSPMLGLLGTITGMMGTFSSMTGQLQNTAGVTAGLAEALITT 195
Query: 183 LLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
+ GL ++I + + KK + ++ A+ + LS
Sbjct: 196 IFGLVIAITGMLVHAYLNTRYKKATLDLDAVADALISGLS 235
>gi|149187086|ref|ZP_01865391.1| biopolymer transport ExbB protein [Erythrobacter sp. SD-21]
gi|148829238|gb|EDL47684.1| biopolymer transport ExbB protein [Erythrobacter sp. SD-21]
Length = 270
Score = 51.6 bits (122), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 89/205 (43%), Gaps = 25/205 (12%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLA 85
I+ ++ I S+ S+ ++ K + +Q++ FW SL+ L +
Sbjct: 32 SILAVMVIMSVGSFYILFTKLFEQNKVMKQYKGVRTNFWRTNSLKEGATKLDKN------ 85
Query: 86 AIFMSAMSEWKKSCDKG-----ARSPIGIQDRIDRMMDVAIARELEEITEKLS----FLG 136
S W++ D + + Q M ++AR I KL+ FL
Sbjct: 86 -------SAWRQLVDDALVAEEKHAKLNDQMEAHDWMHGSLARSEHAIQAKLNGGLPFLA 138
Query: 137 SMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGLCVSIPSSI 194
++ + VG+LG V+G+ +I AG S + V+ P + E+LI +GL V++P+
Sbjct: 139 TVGATAPFVGLLGTVIGIYRALINIGVAGSASIDKVAGP-VGEALIMTAIGLLVAVPAVF 197
Query: 195 AYNKFIEDSKKFAMQMEGFANEFSA 219
AYN ++K M GF+ + A
Sbjct: 198 AYNWLQSRNRKIFDMMSGFSTDLLA 222
>gi|308275036|emb|CBX31635.1| hypothetical protein N47_E51470 [uncultured Desulfobacterium sp.]
Length = 600
Score = 51.6 bits (122), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 56/108 (51%), Gaps = 1/108 (0%)
Query: 120 AIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIES 178
A RE +++ L FL + G G+LG V G+M F +++ N+++I PG+ +
Sbjct: 493 AYVRETLKLSAWLVFLSMSVAGGPFFGLLGTVWGVMNTFAAMSEAGEANIMAIAPGVASA 552
Query: 179 LISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
L + + GL V+IP+ +AYN + K +M F +E + + E
Sbjct: 553 LATTVFGLIVAIPALLAYNYLMTKIKNINSEMVLFVDELNLKIEESEE 600
>gi|297516491|ref|ZP_06934877.1| colicin uptake protein TolQ [Escherichia coli OP50]
Length = 89
Score = 51.6 bits (122), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Query: 147 ILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCVSIPSSIAYNKFIEDSKK 205
+ G V G+M F ++ + + PGI E+LI+ +GL +IP+ +AYN+ + K
Sbjct: 1 MFGTVWGIMHAFIALGAVKQATLQMVAPGIAEALIATAIGLFAAIPAVMAYNRLNQRVNK 60
Query: 206 FAMQMEGFANEFSAILSRQ 224
+ + F EF+AIL RQ
Sbjct: 61 LELNYDNFMEEFTAILHRQ 79
>gi|288817422|ref|YP_003431769.1| biopolymer transport protein ExbB/TolQ-type [Hydrogenobacter
thermophilus TK-6]
gi|288786821|dbj|BAI68568.1| biopolymer transport protein ExbB/TolQ-type [Hydrogenobacter
thermophilus TK-6]
gi|308751029|gb|ADO44512.1| MotA/TolQ/ExbB proton channel [Hydrogenobacter thermophilus TK-6]
Length = 204
Score = 51.6 bits (122), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 98/197 (49%), Gaps = 28/197 (14%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFIT---LRRQFREFEQLFWS 65
MD+ IF L + G AV LLF+ S++SW++II++ +N L + ++ + L +
Sbjct: 1 MDM-IFDLLQKGGFAVYV---LLFL-SLVSWALIIERLINLRAGSILSKSVKDVKSLL-A 54
Query: 66 GQSLETVCK--SLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAR 123
G +E K SL N G I + E+K G D+ + D++
Sbjct: 55 GGDIEGALKLLSLDNSPAGG---ILYRMLEEYKG----------GKVDKRTLLNDLSFEV 101
Query: 124 EL--EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI--PGIIESL 179
L ++ + L+ L +++S L+G+ G + G++ F + A + +++ GI E+L
Sbjct: 102 SLLVPKVEKNLALLSTIASVSPLIGLFGTITGLIKVFSAFAVAQTEQGIALLAAGISEAL 161
Query: 180 ISILLGLCVSIPSSIAY 196
+S GL V+IP+ +AY
Sbjct: 162 VSAATGLAVAIPALLAY 178
>gi|296114478|ref|ZP_06833131.1| ExbB/TolQ/MotA [Gluconacetobacter hansenii ATCC 23769]
gi|295978834|gb|EFG85559.1| ExbB/TolQ/MotA [Gluconacetobacter hansenii ATCC 23769]
Length = 368
Score = 51.6 bits (122), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 102/232 (43%), Gaps = 33/232 (14%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YGL AL+ + ++ ++ S+ +W ++I+K +L ++
Sbjct: 126 NPYGLG-------ALWANGDFIARGVLLIMVFMSVGTWVIMIKKFFEQASLFSAGKDVTS 178
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDV-- 119
FW+ +++ +L A S ++ + G ++ + + +D+
Sbjct: 179 KFWTKPTIKQGADALP-------------ANSPFRYIAETGVKAAEHHEGTMQESIDLHS 225
Query: 120 ----AIARELEEITEKL----SFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNV 169
+I R ++ I +L +FLG++ S VG+ G V G+ +I AG S +
Sbjct: 226 WTTMSIQRSVDLIQTRLQGGLAFLGTVGSTSPFVGLFGTVWGIYHALTAIGIAGNASIDK 285
Query: 170 VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
V+ P + ESLI +GL ++P+ + YN + +K + FA + +IL
Sbjct: 286 VAGP-VGESLIMTAIGLGTAVPAVLGYNLLVRRNKGAMDLVRNFAADLQSIL 336
>gi|94499586|ref|ZP_01306123.1| Biopolymer transport protein [Oceanobacter sp. RED65]
gi|94428340|gb|EAT13313.1| Biopolymer transport protein [Oceanobacter sp. RED65]
Length = 209
Score = 51.6 bits (122), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 92/204 (45%), Gaps = 24/204 (11%)
Query: 31 LFIFSILSWSVIIQKSVNFITLRRQ-------FREFEQLFWSGQSLETVCKSLKNHHNIG 83
L + S+L+ ++ I++ F TLR E L + T K +K ++G
Sbjct: 15 LLLASVLAVAICIER---FWTLRPSNIAPKHLLAEMWALIKKNELTPTRLKQIKQESHLG 71
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
++ ++ ++ K +D ++ A ++ + ++ L+ LG++++
Sbjct: 72 --SVLVAGLTNSKHG-----------RDITKEAIEQAASQSIHDMERFLTALGTIAAVTP 118
Query: 144 LVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISILLGLCVSIPSSIAYNKFIED 202
L+G+LG VLGM+ F I + N + GI E+LI+ G+ V+IPS I Y F
Sbjct: 119 LMGLLGTVLGMISVFNEIMAQGTGNAAVLAGGISEALITTAAGMIVAIPSLICYRIFTRR 178
Query: 203 SKKFAMQMEGFANEFSAILSRQTE 226
+ + ME A + +L E
Sbjct: 179 IDEIVVFMEQEAMKLVDVLHGDRE 202
>gi|83312649|ref|YP_422913.1| biopolymer transport protein [Magnetospirillum magneticum AMB-1]
gi|82947490|dbj|BAE52354.1| Biopolymer transport protein [Magnetospirillum magneticum AMB-1]
Length = 266
Score = 51.6 bits (122), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 98/229 (42%), Gaps = 13/229 (5%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YGL AL+ Q K + +L + S+ SW +++ K + L R +
Sbjct: 42 NPYGLD-------ALWAQGDFVSKGTLIILALMSMASWYILVVKLIEQSRLMRHAKAAAA 94
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
FW S+ ++L A SA E + + I + + + A+
Sbjct: 95 GFWKAASVADGARALAEDSPFRFVA---SAGMEAAQHHEGALTEKIDLNTWVTMSIQRAV 151
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESL 179
+ E+ L+ L ++ S VG+ G V G+ +I AG + + V+ P + E+L
Sbjct: 152 GEIVSELQGGLAVLATVGSTAPFVGLFGTVWGIYHALTAIGIAGQAAIDKVAGP-VGEAL 210
Query: 180 ISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
I GL V++P+ + YN + +K A ++ FA + A+L + G
Sbjct: 211 IMTAFGLAVAVPAVLGYNLLVRRNKLAAEKVRAFAADLHAVLLAGSSGG 259
>gi|294665508|ref|ZP_06730791.1| biopolymer transport ExbB protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
gi|292604711|gb|EFF48079.1| biopolymer transport ExbB protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
Length = 253
Score = 51.6 bits (122), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 57/105 (54%), Gaps = 1/105 (0%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI 172
+DR + A+ RE ++ ++ L ++ + VG+LG V G+ G I S ++ ++
Sbjct: 137 VDRALRQAVTRESTKLQSGMTLLATVGATAPFVGLLGTVWGIYGALIKIGATGSASIDAV 196
Query: 173 PGII-ESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANE 216
G + E+LI +GL V+IP+ A+N F + + + + FA++
Sbjct: 197 AGPVGEALIMTAIGLFVAIPAVFAFNFFSKVNSSVIAKFDTFAHD 241
>gi|126641598|ref|YP_001084582.1| MotA/TolQ/ExbB proton channel [Acinetobacter baumannii ATCC 17978]
Length = 168
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 63/106 (59%), Gaps = 1/106 (0%)
Query: 117 MDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA-GYYSNNVVSIPGI 175
M+ ++E+ + + ++FLG++S+ L+G+LG V+G++ F I G + + IPGI
Sbjct: 48 MEAMASQEISYLEKNINFLGTLSAIAPLLGLLGTVVGIIESFLVIDFGSAGSPSLMIPGI 107
Query: 176 IESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
++LI+ +G+ ++IP+ I+Y F + + ++E + F A L
Sbjct: 108 SKALITTAVGMLIAIPALISYRYFQRVVQDYIAELEQQSTLFHASL 153
>gi|58579632|ref|YP_198648.1| biopolymer transport ExbB protein [Xanthomonas oryzae pv. oryzae
KACC10331]
gi|84621666|ref|YP_449038.1| biopolymer transport ExbB protein [Xanthomonas oryzae pv. oryzae
MAFF 311018]
gi|188574279|ref|YP_001911208.1| biopolymer transport ExbB protein [Xanthomonas oryzae pv. oryzae
PXO99A]
gi|58424226|gb|AAW73263.1| biopolymer transport ExbB protein [Xanthomonas oryzae pv. oryzae
KACC10331]
gi|84365606|dbj|BAE66764.1| biopolymer transport ExbB protein [Xanthomonas oryzae pv. oryzae
MAFF 311018]
gi|188518731|gb|ACD56676.1| biopolymer transport ExbB protein [Xanthomonas oryzae pv. oryzae
PXO99A]
Length = 253
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 57/105 (54%), Gaps = 1/105 (0%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI 172
+DR + A+ RE ++ ++ L ++ + VG+LG V G+ G I S ++ ++
Sbjct: 137 VDRALRQAVTRESTKLQSGMTLLATVGATAPFVGLLGTVWGIYGALIKIGATGSASIDAV 196
Query: 173 PGII-ESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANE 216
G + E+LI +GL V+IP+ A+N F + + + + FA++
Sbjct: 197 AGPVGEALIMTAIGLFVAIPAVFAFNFFSKVNSSVIAKFDTFAHD 241
>gi|21240783|ref|NP_640365.1| biopolymer transport ExbB protein [Xanthomonas axonopodis pv. citri
str. 306]
gi|78045565|ref|YP_361740.1| biopolymer transport ExbB protein [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|289662275|ref|ZP_06483856.1| biopolymer transport ExbB protein [Xanthomonas campestris pv.
vasculorum NCPPB702]
gi|289667641|ref|ZP_06488716.1| biopolymer transport ExbB protein [Xanthomonas campestris pv.
musacearum NCPPB4381]
gi|294627430|ref|ZP_06706014.1| biopolymer transport ExbB protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|325915693|ref|ZP_08177998.1| outer membrane transport energization protein ExbB (TC 2.C.1.1.1)
[Xanthomonas vesicatoria ATCC 35937]
gi|325926211|ref|ZP_08187569.1| outer membrane transport energization protein ExbB (TC 2.C.1.1.1)
[Xanthomonas perforans 91-118]
gi|21106048|gb|AAM34901.1| biopolymer transport ExbB protein [Xanthomonas axonopodis pv. citri
str. 306]
gi|78033995|emb|CAJ21640.1| biopolymer transport ExbB protein [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|292598251|gb|EFF42404.1| biopolymer transport ExbB protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|325538110|gb|EGD09801.1| outer membrane transport energization protein ExbB (TC 2.C.1.1.1)
[Xanthomonas vesicatoria ATCC 35937]
gi|325543393|gb|EGD14818.1| outer membrane transport energization protein ExbB (TC 2.C.1.1.1)
[Xanthomonas perforans 91-118]
Length = 253
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 57/105 (54%), Gaps = 1/105 (0%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI 172
+DR + A+ RE ++ ++ L ++ + VG+LG V G+ G I S ++ ++
Sbjct: 137 VDRALRQAVTRESTKLQSGMTLLATVGATAPFVGLLGTVWGIYGALIKIGATGSASIDAV 196
Query: 173 PGII-ESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANE 216
G + E+LI +GL V+IP+ A+N F + + + + FA++
Sbjct: 197 AGPVGEALIMTAIGLFVAIPAVFAFNFFSKVNSSVIAKFDTFAHD 241
>gi|294670981|ref|ZP_06735837.1| hypothetical protein NEIELOOT_02687 [Neisseria elongata subsp.
glycolytica ATCC 29315]
gi|291307468|gb|EFE48711.1| hypothetical protein NEIELOOT_02687 [Neisseria elongata subsp.
glycolytica ATCC 29315]
Length = 237
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/221 (17%), Positives = 97/221 (43%), Gaps = 5/221 (2%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+ + +F Q + +L I S+ +W+V+I +++ ++ + W +S E
Sbjct: 1 MDLLHVFKQGDPVLIAAFLILVIMSLATWTVMIVRTIKLRRAKKANARVKDRIWGAKSWE 60
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSE---WKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + + + ++ + + A+ + ++ D S + + + + +
Sbjct: 61 DAIRIARENEDAPMSNMLLDAVKADEFFHRNQDTDLASGVPFSQYLLHQIHHNQGQIMRG 120
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGL 186
L+ L S+ S+ +G+ G V G+ +I ++ ++ G I E+L++ GL
Sbjct: 121 FEGGLTALASIGSSAPFIGLFGTVWGIYHALVNIGQSGQVSIAAVAGPIGEALVATAFGL 180
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA-ILSRQTE 226
+IP+ ++YN + +K + F ++ IL+++T
Sbjct: 181 FAAIPAVLSYNFLVRGNKTLQQDLHAFGHDLHVQILNKKTR 221
>gi|110638417|ref|YP_678626.1| biopolymer transport protein [Cytophaga hutchinsonii ATCC 33406]
gi|110281098|gb|ABG59284.1| outer membrane transport energization protein ExbB [Cytophaga
hutchinsonii ATCC 33406]
Length = 275
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 87/180 (48%), Gaps = 18/180 (10%)
Query: 49 FITLRRQF---------REFEQLFWSGQ--SLETVCKSLKNHHNIGLAAIFMSAMSEWKK 97
FIT+R+ + R+ + S S +VC+ K L + ++ + ++K
Sbjct: 82 FITIRQAYGSGSLDNFVRKIKSYLSSNDVNSAISVCEEQKGS----LGNVTLAVLKKYKS 137
Query: 98 SCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGF 157
S Q + + ++ A + EL + + L+ L +++S LVG+LG V+GM+
Sbjct: 138 VAADKTMSKDQKQVALQKELEEATSLELPILEKNLTILATLASVATLVGLLGTVMGMIKA 197
Query: 158 FQSIAGYYSNNVVSIP-GIIESLISILLGLCVSIPSSIAYNKFIE--DSKKFAMQMEGFA 214
F ++A + N ++ GI E+LI+ LG+ S + I YN F D+ +++ GF+
Sbjct: 198 FAALASSGTPNAEALATGISEALINTALGIASSAFAIIFYNLFTSQIDTLTYSIDEVGFS 257
>gi|21229487|ref|NP_635404.1| biopolymer transport ExbB protein [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66766361|ref|YP_241123.1| biopolymer transport ExbB protein [Xanthomonas campestris pv.
campestris str. 8004]
gi|188989405|ref|YP_001901415.1| macromolecule import protein [Xanthomonas campestris pv. campestris
str. B100]
gi|190359307|sp|B0RLE6|EXBB_XANCB RecName: Full=Biopolymer transport protein exbB
gi|190359308|sp|P0C7L9|EXBB_XANCP RecName: Full=Biopolymer transport protein exbB
gi|22023958|gb|AAM89267.1|AF527951_4 ExbB [Xanthomonas campestris pv. campestris]
gi|21110948|gb|AAM39328.1| biopolymer transport ExbB protein [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66571693|gb|AAY47103.1| biopolymer transport ExbB protein [Xanthomonas campestris pv.
campestris str. 8004]
gi|167731165|emb|CAP49337.1| macromolecule import protein [Xanthomonas campestris pv.
campestris]
Length = 253
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 57/105 (54%), Gaps = 1/105 (0%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI 172
+DR + A+ RE ++ ++ L ++ + VG+LG V G+ G I S ++ ++
Sbjct: 137 VDRALRQAVTRESTKLQSGMTLLATVGATAPFVGLLGTVWGIYGALIKIGATGSASIDAV 196
Query: 173 PGII-ESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANE 216
G + E+LI +GL V+IP+ A+N F + + + + FA++
Sbjct: 197 AGPVGEALIMTAIGLFVAIPAVFAFNFFSKVNSSVIAKFDTFAHD 241
>gi|86134191|ref|ZP_01052773.1| MotA/TolQ/ExbB proton channel family protein [Polaribacter sp.
MED152]
gi|85821054|gb|EAQ42201.1| MotA/TolQ/ExbB proton channel family protein [Polaribacter sp.
MED152]
Length = 229
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 98/219 (44%), Gaps = 19/219 (8%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREF-EQL--FWSGQ 67
+SI+ L M GL + II +LF+ ++ + ++ + + F Q+ + S
Sbjct: 22 LSIYKLIMDGGLGGQIIIAILFVLLAVALYIYFERIFAIKAASKVDKNFMNQIKDYVSNG 81
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
LE+ +L N N A + +S K + I+ ++ E+ E
Sbjct: 82 KLES-ANALCNSKNTPTARLISKGISRIGKPLED-----------INTAIETTGKLEIYE 129
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA---GYYSNNVVSIPGIIESLISILL 184
+ + +S L +++ A ++G LG V+GM+ IA G ++S G+ ++ + +
Sbjct: 130 LEKNVSVLATVAGAAPMIGFLGTVIGMIVAIHEIANAGGQIDIKMLS-DGLYTAMTTTVA 188
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
GL V I + I YN + + K QME + EF +L+
Sbjct: 189 GLIVGIIAYITYNHLVVRTNKVVYQMEAKSVEFLDLLNE 227
>gi|196233090|ref|ZP_03131938.1| MotA/TolQ/ExbB proton channel [Chthoniobacter flavus Ellin428]
gi|196222897|gb|EDY17419.1| MotA/TolQ/ExbB proton channel [Chthoniobacter flavus Ellin428]
Length = 634
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 55/108 (50%), Gaps = 1/108 (0%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI 172
I +D + RE +++ L FL + G +G+LG V+G+M F IA V SI
Sbjct: 506 IKATLDGGVVRETQKLNSSLVFLTIGIAGGPYLGLLGTVIGVMITFAVIAKSGQVEVNSI 565
Query: 173 -PGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
PGI +L++ + GL V+IPS AY+ K M F +EF A
Sbjct: 566 APGIAGALLATVAGLAVAIPSLFAYSYISTRIKDAISDMHVFIDEFVA 613
>gi|77458723|ref|YP_348229.1| MotA/TolQ/ExbB proton channel [Pseudomonas fluorescens Pf0-1]
gi|77382726|gb|ABA74239.1| outer membrane transport energization protein ExbB [Pseudomonas
fluorescens Pf0-1]
Length = 599
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 100/201 (49%), Gaps = 10/201 (4%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS-GQSLETVCKSLKNHHNI-- 82
II +L + SW ++++K+ + +F F G LE + +
Sbjct: 370 VIIAVLVLMMFQSWIIMLRKNRTLSRVTAANEDFRVQFAKVGTRLEMFADDTQLAQRLQH 429
Query: 83 -GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRM---MDVAIARELEEITEKLSFLGSM 138
L +++ A+ E + ++GA + I+ + MD RE ++++ KLS L +
Sbjct: 430 SSLWRLYLVAVKEIRTRREQGADTSSVSAATIEAIRCSMDGVRTRENQQLSSKLSTLSNA 489
Query: 139 SSAGLLVGILGAVLGMMGFF--QSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAY 196
+ G +G+LG VLG+M F ++AG + N ++ PG+ +L++ +GL V+IP+ Y
Sbjct: 490 IAGGPYIGLLGTVLGIMVVFLGTAMAGDVNINAIA-PGMAAALLATAMGLFVAIPALFGY 548
Query: 197 NKFIEDSKKFAMQMEGFANEF 217
N+ I +K+ + M F +EF
Sbjct: 549 NRLITRNKEVSADMRVFVDEF 569
>gi|325922767|ref|ZP_08184501.1| outer membrane transport energization protein ExbB (TC 2.C.1.1.1)
[Xanthomonas gardneri ATCC 19865]
gi|325922955|ref|ZP_08184667.1| outer membrane transport energization protein ExbB (TC 2.C.1.1.1)
[Xanthomonas gardneri ATCC 19865]
gi|325546563|gb|EGD17705.1| outer membrane transport energization protein ExbB (TC 2.C.1.1.1)
[Xanthomonas gardneri ATCC 19865]
gi|325546763|gb|EGD17883.1| outer membrane transport energization protein ExbB (TC 2.C.1.1.1)
[Xanthomonas gardneri ATCC 19865]
Length = 254
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 56/105 (53%), Gaps = 1/105 (0%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI 172
+DR + A+ RE + ++ L ++ + VG+LG V G+ G I S ++ ++
Sbjct: 138 VDRALRQAVTRESTRLQSGMTLLATVGATAPFVGLLGTVWGIYGALIKIGATGSASIDAV 197
Query: 173 PGII-ESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANE 216
G + E+LI +GL V+IP+ A+N F + + + + FA++
Sbjct: 198 AGPVGEALIMTAIGLFVAIPAVFAFNFFSKVNSSVIAKFDTFAHD 242
>gi|295677679|ref|YP_003606203.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. CCGE1002]
gi|295437522|gb|ADG16692.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. CCGE1002]
Length = 238
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 86/211 (40%), Gaps = 13/211 (6%)
Query: 17 FMQMGLAV-KCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKS 75
++Q A+ + +L SI SW +I KS +RQ FW +L
Sbjct: 10 YLQTSDAITHAVAYVLLAMSIASWCFLIVKSWILTRAKRQSSRAITRFWQAPTLAEGVAI 69
Query: 76 LKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDV--AIARELEEITEKLS 133
L+ +F P + R++R V A+ + L +L
Sbjct: 70 LRRADR---ERVFAPLAE--AALHAAEVDIPGALLARVERSERVLRALRQALNASHRRLE 124
Query: 134 F----LGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCV 188
F L S+ S VG+LG V G+ SIA + ++ G + E+LI GL V
Sbjct: 125 FGQVLLASVGSTAPFVGLLGTVWGIYHALGSIAASGQAQIENVAGPVGEALIMTAFGLVV 184
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
+IP+ + YN ++ +++GFA++ A
Sbjct: 185 AIPAVLGYNVLGRLVRQLTEELDGFAHDLHA 215
>gi|166709904|ref|ZP_02241111.1| biopolymer transport ExbB protein [Xanthomonas oryzae pv. oryzicola
BLS256]
Length = 253
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 57/105 (54%), Gaps = 1/105 (0%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI 172
+DR + A+ RE ++ ++ L ++ + VG+LG V G+ G I S ++ ++
Sbjct: 137 VDRALRQAVTRESTKLQSGMTLLATVGATSPFVGLLGTVWGIYGALIKIGATGSASIDAV 196
Query: 173 PGII-ESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANE 216
G + E+LI +GL V+IP+ A+N F + + + + FA++
Sbjct: 197 AGPVGEALIMTAIGLFVAIPAVFAFNFFSKVNSSVIAKFDTFAHD 241
>gi|171059908|ref|YP_001792257.1| MotA/TolQ/ExbB proton channel [Leptothrix cholodnii SP-6]
gi|170777353|gb|ACB35492.1| MotA/TolQ/ExbB proton channel [Leptothrix cholodnii SP-6]
Length = 278
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 102/228 (44%), Gaps = 24/228 (10%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YGL A+ + K ++ LL I S+ +W +++ K++ R+ RE +
Sbjct: 60 NPYGLK-------AMIEHGDMVAKGVLGLLMIMSLGTWYLLVTKALE---QRKLLREAKS 109
Query: 62 L-----FWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRM 116
+ FW+ +L SL A F++ + G + + + I
Sbjct: 110 VGAGSRFWTAGTLRQGSDSLAKDG----AFRFIADTALEASQKHDGVLAGVDLGSWITTS 165
Query: 117 MDVAIARELEEITEK-LSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIP 173
++ A E+E +K L+FL ++ S +G+ G V G++ +I AG S + V+ P
Sbjct: 166 LEEA-GEEVEHRLQKGLAFLATVGSTSPFIGLFGTVWGILNALTAIGVAGQASIDKVAGP 224
Query: 174 GIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+ E+LI +GL V++P+ + YN + + + F ++ A L
Sbjct: 225 -VGEALIMTAIGLAVAVPAVLGYNWLVGRNSTALHYVTTFGSKLRATL 271
>gi|325295281|ref|YP_004281795.1| MotA/TolQ/ExbB proton channel [Desulfurobacterium
thermolithotrophum DSM 11699]
gi|325065729|gb|ADY73736.1| MotA/TolQ/ExbB proton channel [Desulfurobacterium
thermolithotrophum DSM 11699]
Length = 206
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 87/201 (43%), Gaps = 23/201 (11%)
Query: 31 LFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMS 90
L S++S ++II+K FI LR + L + L + NIG A F
Sbjct: 17 LLFLSVISVAIIIEK---FIVLRLS------KLVPKEDLRLIVDFL-SEGNIGDAVEFCK 66
Query: 91 AMSEWKKSCDKGARSPIG--IQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGIL 148
+ S A IG ++ +V R+ EI + L ++++ L+G++
Sbjct: 67 KRKSFLTSIVLDALKNIGKPTKENFLNAFEVTAKRKFMEIERGMPLLATIAAVSPLLGLV 126
Query: 149 GAVLGMMGFFQSIAGYYSNNVVSIP-----GIIESLISILLGLCVSIPSSIAYNKFIEDS 203
G VLGM+ F + + + P GI E+L++ + GL V+IP+ YN F
Sbjct: 127 GTVLGMIKIFGVLTA--GSTAIGNPQELSAGIAEALLTTVFGLLVAIPALFMYNLFQRKL 184
Query: 204 KKFAMQMEG----FANEFSAI 220
K A ++E AN F +
Sbjct: 185 DKIAAEVESAGVLIANNFKGL 205
>gi|108763356|ref|YP_628556.1| TonB system transport protein ExbB/TolQ [Myxococcus xanthus DK
1622]
gi|108467236|gb|ABF92421.1| tonB system transport protein ExbB/TolQ [Myxococcus xanthus DK
1622]
Length = 250
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 95/216 (43%), Gaps = 11/216 (5%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLR---RQFREFEQLFWS 65
M+ ++ ++ MG+ I L +F++ S +V ++ F R +QF +
Sbjct: 1 MNFNLRDIYNHMGVFALGIAWTLILFAVASLAVFFERLFVFFRSRSISKQFASRAGPLLT 60
Query: 66 GQSLETVCKSLKNHHNIGLAAIFMSAMSEW--KKSCDKGARSPIGIQDR-IDRMMDVAIA 122
E + K + LA + M + K G P+ + R + R+ +
Sbjct: 61 QHQHEALVKEAEATKGSHLAMLLGGGMKHFLAKSRVPAGKLGPVELTRRELVRINE---- 116
Query: 123 RELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLIS 181
R ++ +S L ++ S VG+LG V+G++ F IA S + ++ GI E+L+
Sbjct: 117 RVSADVRRGMSVLATVGSVAPFVGLLGTVVGIIEAFSGIAKEGSGGLGAVSAGIAEALVV 176
Query: 182 ILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEF 217
LGL V+IP+ + +N + + ++ +EF
Sbjct: 177 TALGLLVAIPAVLMFNFLSTRADSLQLSLDAARSEF 212
>gi|315123542|ref|YP_004065548.1| putative Tol protein [Pseudoalteromonas sp. SM9913]
gi|315017302|gb|ADT70639.1| putative Tol protein [Pseudoalteromonas sp. SM9913]
Length = 455
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 52/88 (59%), Gaps = 1/88 (1%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
D ++ + AI RE+ +IT L+ + +S L+G+LG V GM+ FQ+I + + +
Sbjct: 339 DTLELKLSEAILREMPKITRNLTLIKIISVVAPLLGLLGTVTGMINTFQAITLFGTGDPK 398
Query: 171 SIP-GIIESLISILLGLCVSIPSSIAYN 197
+ GI ++L++ +LGL V+IP+ Y
Sbjct: 399 LMAGGISQALVTTVLGLVVAIPTVFLYT 426
>gi|296136138|ref|YP_003643380.1| MotA/TolQ/ExbB proton channel [Thiomonas intermedia K12]
gi|294340373|emb|CAZ88754.1| putative Biopolymer transport protein MotA/TolQ/ExbB [Thiomonas sp.
3As]
gi|295796260|gb|ADG31050.1| MotA/TolQ/ExbB proton channel [Thiomonas intermedia K12]
Length = 206
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 99/213 (46%), Gaps = 24/213 (11%)
Query: 18 MQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSL- 76
+QM A I L + SI++ +VI ++ +LRR +L ++L K L
Sbjct: 2 LQMVEAAGWPIWPLILCSIVALAVIFER---LASLRRARILPTKLL--DEALNVSAKQLP 56
Query: 77 ------KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
K N L A+ S +S + S G+Q+ ++ A ++ + +
Sbjct: 57 AADVIDKLEQNSPLGAVLASGF----RSVARPHASAAGLQEDLEN----AGRNQVYRLQK 108
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFF--QSIAGYYSNNVVSIPGIIESLISILLGLCV 188
L+ L +++SA L+G+LG V+GM+ F QS AG ++ V GI +L + LGL V
Sbjct: 109 YLNALATVASAAPLLGLLGTVVGMIEIFGSQSTAG--TDPTVLAHGISVALYNTALGLIV 166
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
++PS I Y F + +++E A + L
Sbjct: 167 AVPSLIFYRYFRSRVDDYTVELEQAARRLATHL 199
>gi|171911017|ref|ZP_02926487.1| putative biopolymer transport protein [Verrucomicrobium spinosum
DSM 4136]
Length = 295
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 65/133 (48%), Gaps = 7/133 (5%)
Query: 97 KSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMG 156
K+ D ++P D + + + +R+ I +++S+LG + S ++G+LG V G++
Sbjct: 137 KALDFATKNPTASFDEVREVTEAEGSRQASLILQRISYLGDVGSIAPMMGLLGTVFGLIT 196
Query: 157 FFQSI-----AGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
F I AG + V + G+ E+L GL + IP+ + Y +++ ++E
Sbjct: 197 SFNQISHTQFAGSQAVGVAT--GVYEALFCTAAGLIIGIPALMIYAMLRGKAQRLVSELE 254
Query: 212 GFANEFSAILSRQ 224
+ A+LS Q
Sbjct: 255 SASTHLMALLSAQ 267
>gi|194363787|ref|YP_002026397.1| MotA/TolQ/ExbB proton channel [Stenotrophomonas maltophilia R551-3]
gi|194346591|gb|ACF49714.1| MotA/TolQ/ExbB proton channel [Stenotrophomonas maltophilia R551-3]
Length = 253
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 91/204 (44%), Gaps = 9/204 (4%)
Query: 22 LAVKCIITL-LFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNH- 79
AV ++ L L + S +SW + L+ LFW + + ++++
Sbjct: 38 FAVSWVVLLTLVVMSAMSWYWTVINIFRATRLKSAADRVVSLFWDTPNAQDAIRAMEEQP 97
Query: 80 --HNIGLAAIFMSAMSEWKKSCDKGARSPIGIQ----DRIDRMMDVAIARELEEITEKLS 133
A+ + + + + GA +G + +DR + A+ RE ++ ++
Sbjct: 98 ASEPFSKIALDAAQAAAHHQRAEGGATGGVGENLSRSEFVDRALRQAVTRESNKLQSGMT 157
Query: 134 FLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCVSIPS 192
L ++ + VG+LG V G+ G I S ++ ++ G + E+LI +GL V+IP+
Sbjct: 158 LLATVGATAPFVGLLGTVWGIYGALIKIGATGSASIDAVAGPVGEALIMTAIGLFVAIPA 217
Query: 193 SIAYNKFIEDSKKFAMQMEGFANE 216
A+N F + + + + FA++
Sbjct: 218 VFAFNFFSKINSATISKFDTFAHD 241
>gi|77362430|ref|YP_342004.1| putative Tol protein [Pseudoalteromonas haloplanktis TAC125]
gi|76877341|emb|CAI89558.1| putative Tol protein [Pseudoalteromonas haloplanktis TAC125]
Length = 455
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 52/88 (59%), Gaps = 1/88 (1%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
D ++ + AI RE+ +IT L+ + +S L+G+LG V GM+ FQ+I + + +
Sbjct: 339 DTLELKLSEAILREMPKITRNLTLIKIISVVAPLLGLLGTVTGMINTFQAITLFGTGDPK 398
Query: 171 SIP-GIIESLISILLGLCVSIPSSIAYN 197
+ GI ++L++ +LGL V+IP+ Y
Sbjct: 399 LMAGGISQALVTTVLGLVVAIPTVFIYT 426
>gi|223039322|ref|ZP_03609611.1| biopolymer transport ExbB protein [Campylobacter rectus RM3267]
gi|222879383|gb|EEF14475.1| biopolymer transport ExbB protein [Campylobacter rectus RM3267]
Length = 209
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 89/173 (51%), Gaps = 21/173 (12%)
Query: 31 LFIFSILSWSVIIQKSVNF----ITLRRQFR-EFEQLFWSG--QSLETVCKSLKNHHNIG 83
+F S+L +V+++K V F I F+ + L G + ++ CK KN ++
Sbjct: 15 IFFLSVLGVAVLLEKGVYFLFIEIDATSSFKIKLCNLILEGDYEKIKEFCKRYKN--SLA 72
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
A+F++ ++ +GA + +ID + + A++ +L + ++ LG +SA
Sbjct: 73 KTALFVA------QNLGEGAS-----KTQIDYIAEEAVSMQLTSLEKRTWILGLCASASP 121
Query: 144 LVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAY 196
+G+LG ++GM+ F ++G +V++ GI E+L + GL V+IP I Y
Sbjct: 122 QLGLLGTIVGMIKAFSGLSGGVDAPLVAV-GISEALYTTAFGLIVAIPCVIFY 173
>gi|330955709|gb|EGH55969.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae Cit 7]
Length = 138
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 57/109 (52%), Gaps = 1/109 (0%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
QD ++R + I +E + + L S+ S +G+ G V G++ +I+ S ++
Sbjct: 3 QDLLERSLRQQIHKERRRLESGMILLASIGSTAPFIGLFGTVFGIIHALTAISQARSASI 62
Query: 170 VSIPGII-ESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEF 217
+ G I E+L++ +G+ V++P+ +AYN F K +E FA +F
Sbjct: 63 AVVAGPIGEALVATGVGIAVAVPAVLAYNFFGRRLKLVIADLEEFAVDF 111
>gi|56476435|ref|YP_158024.1| MotA/TolQ/ExbB proton channel family protein [Aromatoleum
aromaticum EbN1]
gi|56312478|emb|CAI07123.1| MotA/TolQ/ExbB proton channel family protein [Aromatoleum
aromaticum EbN1]
Length = 259
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 101/234 (43%), Gaps = 20/234 (8%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
+ +GLA L+ Q L +K + L + S+ SW +I+ ++V RR F +
Sbjct: 4 DTFGLA-------HLWGQSDLIIKLVAFTLVVMSVASWYLILVRTVRQFRARR-FDSAVE 55
Query: 62 LFWSGQSLETVCKSLKN---HHNIGLAAIFMSAMSEWKKSCDKGAR--SPIGIQDRIDRM 116
FW+ L+ L A +A +E + G + + + R
Sbjct: 56 AFWNAPHLDEGLARLSGAAPDSPFEALARQGAAAAEHLRRHTHGETLGGKLDADEFVTRA 115
Query: 117 MDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII 176
M +IA ++ L+ L S+ S VG+ G V G+ + ++ G ++ + ++ +
Sbjct: 116 MRKSIALSTAQLESGLTVLASIGSTAPFVGLFGTVWGI---YHALIGISTSGMATLDKVA 172
Query: 177 ----ESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
E+LI GL V+IP+ +A+N F ++ ++ FA++ A + T
Sbjct: 173 GPVGEALIMTAFGLFVAIPAVLAFNTFTRANRLELSLLDAFAHDLHAWFTTGTR 226
>gi|254239070|ref|ZP_04932393.1| transport protein ExbB2 [Pseudomonas aeruginosa C3719]
gi|126171001|gb|EAZ56512.1| transport protein ExbB2 [Pseudomonas aeruginosa C3719]
Length = 615
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 102/202 (50%), Gaps = 12/202 (5%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS-GQSLETVCK----SLKNHH 80
II +L + + SW ++ +K+ N + R F + F G LE + + + H
Sbjct: 389 VIIAILALMMVQSWVIMYRKNQNVGRVSRANGLFRERFAEVGTRLELLADDRELAARLQH 448
Query: 81 NIGLAAIFMSAMSEWKKSCDKGARSP---IGIQDRIDRMMDVAIARELEEITEKLSFLGS 137
+ L ++ A+ E + ++GA + + I MD +E +++ +LS L +
Sbjct: 449 S-SLWRLYQVAVKEIRTRREQGADTSSVSAATIEAIRASMDGVRTKENQQLGSRLSSLSN 507
Query: 138 MSSAGLLVGILGAVLGMMGFF--QSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIA 195
+ G +G+LG VLG+M F ++AG + N ++ PG+ +L++ +GL V+IP+
Sbjct: 508 AIAGGPYIGLLGTVLGIMVVFLGTAMAGDVNINAIA-PGMAAALLATAMGLFVAIPALFG 566
Query: 196 YNKFIEDSKKFAMQMEGFANEF 217
YN+ + +K+ + M F +EF
Sbjct: 567 YNRLVTRNKEVSADMRVFVDEF 588
>gi|107100158|ref|ZP_01364076.1| hypothetical protein PaerPA_01001180 [Pseudomonas aeruginosa PACS2]
gi|116048599|ref|YP_792602.1| transport protein ExbB2 [Pseudomonas aeruginosa UCBPP-PA14]
gi|218893349|ref|YP_002442218.1| transport protein ExbB2 [Pseudomonas aeruginosa LESB58]
gi|254244930|ref|ZP_04938252.1| transport protein ExbB2 [Pseudomonas aeruginosa 2192]
gi|313105520|ref|ZP_07791789.1| transport protein ExbB2 [Pseudomonas aeruginosa 39016]
gi|115583820|gb|ABJ09835.1| transport protein ExbB2 [Pseudomonas aeruginosa UCBPP-PA14]
gi|126198308|gb|EAZ62371.1| transport protein ExbB2 [Pseudomonas aeruginosa 2192]
gi|218773577|emb|CAW29391.1| transport protein ExbB2 [Pseudomonas aeruginosa LESB58]
gi|310878291|gb|EFQ36885.1| transport protein ExbB2 [Pseudomonas aeruginosa 39016]
Length = 615
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 102/202 (50%), Gaps = 12/202 (5%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS-GQSLETVCK----SLKNHH 80
II +L + + SW ++ +K+ N + R F + F G LE + + + H
Sbjct: 389 VIIAILALMMVQSWVIMYRKNQNVGRVSRANGLFRERFAEVGTRLELLADDRELAARLQH 448
Query: 81 NIGLAAIFMSAMSEWKKSCDKGARSP---IGIQDRIDRMMDVAIARELEEITEKLSFLGS 137
+ L ++ A+ E + ++GA + + I MD +E +++ +LS L +
Sbjct: 449 S-SLWRLYQVAVKEIRTRREQGADTSSVSAATIEAIRASMDGVRTKENQQLGSRLSSLSN 507
Query: 138 MSSAGLLVGILGAVLGMMGFF--QSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIA 195
+ G +G+LG VLG+M F ++AG + N ++ PG+ +L++ +GL V+IP+
Sbjct: 508 AIAGGPYIGLLGTVLGIMVVFLGTAMAGDVNINAIA-PGMAAALLATAMGLFVAIPALFG 566
Query: 196 YNKFIEDSKKFAMQMEGFANEF 217
YN+ + +K+ + M F +EF
Sbjct: 567 YNRLVTRNKEVSADMRVFVDEF 588
>gi|242279552|ref|YP_002991681.1| MotA/TolQ/ExbB proton channel [Desulfovibrio salexigens DSM 2638]
gi|242122446|gb|ACS80142.1| MotA/TolQ/ExbB proton channel [Desulfovibrio salexigens DSM 2638]
Length = 474
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 104/241 (43%), Gaps = 30/241 (12%)
Query: 1 MNNYGLAI-MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREF 59
+++ G+A +DIS A F ++ K I L +L W +II FI + +F
Sbjct: 234 LDDNGVAFPVDISNGASFARLAQQQKSIQEWLSAGGLLVWPIIIVGIAAFILVIERFYTL 293
Query: 60 EQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKS---CDKGARSP----IG---- 108
++ S + K LK M A EW K C++ + P IG
Sbjct: 294 SRI--RSNSDRNMAKILK-----------MIANDEWDKCRSFCNEQSHYPTCRIIGHTLN 340
Query: 109 ----IQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGY 164
++ I+ + +EL + L L +++ L+G+LG V GM+ FQ I Y
Sbjct: 341 YMGQAREIIENAFQEGLLKELPILERSLPTLNVLAAVAPLLGLLGTVTGMISTFQIITLY 400
Query: 165 YSNNVVSIP-GIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
+ + + GI E+L++ LGL V++P I ++ K ME + F+ L +
Sbjct: 401 GTGDPRMMSGGISEALVTTQLGLAVAVPIMILHHILDRRVDKIISDMEEKGSGFAVALMK 460
Query: 224 Q 224
+
Sbjct: 461 K 461
>gi|152984716|ref|YP_001350158.1| transport protein ExbB2 [Pseudomonas aeruginosa PA7]
gi|150959874|gb|ABR81899.1| transport protein ExbB2 [Pseudomonas aeruginosa PA7]
Length = 608
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 102/202 (50%), Gaps = 12/202 (5%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS-GQSLETVCK----SLKNHH 80
II +L + + SW ++ +K+ N + R F + F G LE + + + H
Sbjct: 382 VIIAILALMMVQSWVIMYRKNQNVGRVSRANGLFRERFAEVGTRLELLADDRELAARLQH 441
Query: 81 NIGLAAIFMSAMSEWKKSCDKGARSP---IGIQDRIDRMMDVAIARELEEITEKLSFLGS 137
+ L ++ A+ E + ++GA + + I MD +E +++ +LS L +
Sbjct: 442 S-SLWRLYQVAVKEIRTRREQGADTSSVSAATIEAIRASMDGVRTKENQQLGARLSSLSN 500
Query: 138 MSSAGLLVGILGAVLGMMGFF--QSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIA 195
+ G +G+LG VLG+M F ++AG + N ++ PG+ +L++ +GL V+IP+
Sbjct: 501 AIAGGPYIGLLGTVLGIMVVFLGTAMAGDVNINAIA-PGMAAALLATAMGLFVAIPALFG 559
Query: 196 YNKFIEDSKKFAMQMEGFANEF 217
YN+ + +K+ + M F +EF
Sbjct: 560 YNRLVTRNKEVSADMRVFVDEF 581
>gi|332533405|ref|ZP_08409270.1| MotA/TolQ/ExbB proton channel family protein [Pseudoalteromonas
haloplanktis ANT/505]
gi|332037114|gb|EGI73571.1| MotA/TolQ/ExbB proton channel family protein [Pseudoalteromonas
haloplanktis ANT/505]
Length = 455
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
D ++ + AI RE+ ++T L+ + +S L+G+LG V GM+ FQ+I + + +
Sbjct: 338 HDTLELKLSEAILREMPKVTRNLTLIKIISVVAPLLGLLGTVTGMINTFQAITLFGTGDP 397
Query: 170 VSIP-GIIESLISILLGLCVSIPSSIAYN 197
+ GI ++L++ +LGL V+IP+ Y
Sbjct: 398 KLMAGGISQALVTTVLGLVVAIPTVFLYT 426
>gi|268680683|ref|YP_003305114.1| MotA/TolQ/ExbB proton channel [Sulfurospirillum deleyianum DSM
6946]
gi|268618714|gb|ACZ13079.1| MotA/TolQ/ExbB proton channel [Sulfurospirillum deleyianum DSM
6946]
Length = 148
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 52/113 (46%), Gaps = 10/113 (8%)
Query: 108 GIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSN 167
IQ + M + LE +L L + + +G+ G VLG++ F +I SN
Sbjct: 41 AIQTKYQTMDYYTLRLSLES---RLGILATFGNNAPFIGLFGTVLGIIQAFHAIG---SN 94
Query: 168 NVVSIP----GIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANE 216
N + GI E+LI+ GL V+IP IAYN F K F Q E NE
Sbjct: 95 NAFDVQPIMQGISEALIATATGLFVAIPCVIAYNYFTRRVKVFLTQKEAQLNE 147
>gi|190572101|ref|YP_001969946.1| putative biopolymer transport exbB protein [Stenotrophomonas
maltophilia K279a]
gi|190010023|emb|CAQ43628.1| putative biopolymer transport exbB protein [Stenotrophomonas
maltophilia K279a]
Length = 253
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 57/105 (54%), Gaps = 1/105 (0%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI 172
+DR + A+ RE ++ ++ L ++ + VG+LG V G+ G I S ++ ++
Sbjct: 137 VDRALRQAVTRESNKLQSGMTLLATVGATAPFVGLLGTVWGIYGALIKIGATGSASIDAV 196
Query: 173 PGII-ESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANE 216
G + E+LI +GL V+IP+ A+N F + + + + FA++
Sbjct: 197 AGPVGEALIMTAIGLFVAIPAVFAFNFFSKINSATISKFDTFAHD 241
>gi|85709675|ref|ZP_01040740.1| biopolymer transport ExbB protein [Erythrobacter sp. NAP1]
gi|85688385|gb|EAQ28389.1| biopolymer transport ExbB protein [Erythrobacter sp. NAP1]
Length = 265
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 92/215 (42%), Gaps = 31/215 (14%)
Query: 21 GLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHH 80
G I+ ++ I S+ S+ ++ K + RQ++ Q FW SL+ L+ +
Sbjct: 30 GPVAWSILAVMIIMSVGSFYILFTKLFEQNKVMRQYQSVRQSFWRASSLKEGATKLEKN- 88
Query: 81 NIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVA-----IAREL--------EE 127
S W++ D + Q+ +M + EL +
Sbjct: 89 ------------SAWRQLADDA----VTAQEHHGKMEGAGQEVHFVEEELAHSQNTINQS 132
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGL 186
++ LSFL S+ + +G+LG V+G+ +I S ++ + G + E+LI +GL
Sbjct: 133 LSGGLSFLASVGATAPFIGLLGTVIGIYRALINIGIEGSASIDKVAGPVGEALIMTAIGL 192
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
V++P+ +A+N +++ M F+N A +
Sbjct: 193 LVAVPAVLAFNWLQSRNRRIDALMTDFSNSIVAYI 227
>gi|254444574|ref|ZP_05058050.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Verrucomicrobiae bacterium DG1235]
gi|198258882|gb|EDY83190.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Verrucomicrobiae bacterium DG1235]
Length = 202
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 71/165 (43%), Gaps = 22/165 (13%)
Query: 83 GLAAIFMSAMSEWKKSCD-----KGARSPI---------GIQDRIDRMMDVAIARELEEI 128
GL + S EWK D KGA I + D DRM ++ + L I
Sbjct: 42 GLNDYYNSDPDEWKHWVDEPDDAKGALGDIIQYAQHEVHSMDDVRDRMDEIR-SSHLSRI 100
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI--PGIIESLISILLGL 186
++ F + L G+LG V GM+ F ++ + N V + GI E+LI+ GL
Sbjct: 101 NSRIRFAAILVGTAPLTGLLGTVTGMLSTFAGLSNSAAGNTVDLVAGGISEALITTQTGL 160
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAI-LSRQTEGNIS 230
++IP I N K+ QM+ F + + L R +G I+
Sbjct: 161 VLAIPGYIMLNIV----KRRRDQMDAFCTQVEILTLKRFEKGKIA 201
>gi|293606745|ref|ZP_06689098.1| transporter ExbB2 [Achromobacter piechaudii ATCC 43553]
gi|292814895|gb|EFF74023.1| transporter ExbB2 [Achromobacter piechaudii ATCC 43553]
Length = 237
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 95/197 (48%), Gaps = 10/197 (5%)
Query: 30 LLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS-GQSLETVCKSL---KNHHNIGLA 85
+L + + SW ++ +KS N + F F + GQ LE + + N L
Sbjct: 1 MLVLMMVQSWIIMFRKSRNVARVSAANEAFRDSFATVGQRLELLADDTALAQRLANASLW 60
Query: 86 AIFMSAMSEWKKSCDKGARSP---IGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAG 142
++ A++E + +GA + + I MD +E + KL L + + G
Sbjct: 61 RLYRVAINEIRTRRAQGADTTSISAATIEAIRASMDAVRTKENLALGSKLGSLSNAIAGG 120
Query: 143 LLVGILGAVLGMMGFF--QSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFI 200
+G+LG VLG+M F ++AG + N ++ PG+ +L++ +GL V+IP+ YN+ +
Sbjct: 121 PYIGLLGTVLGIMVVFLGTAMAGDVNINAIA-PGMAAALLATAMGLFVAIPALFGYNRLV 179
Query: 201 EDSKKFAMQMEGFANEF 217
+K+ + M F +EF
Sbjct: 180 SRNKEVSADMRVFVDEF 196
>gi|15595890|ref|NP_249384.1| transport protein ExbB2 [Pseudomonas aeruginosa PAO1]
gi|9946575|gb|AAG04082.1|AE004505_3 transport protein ExbB2 [Pseudomonas aeruginosa PAO1]
Length = 615
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 102/202 (50%), Gaps = 12/202 (5%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS-GQSLETVCK----SLKNHH 80
II +L + + SW ++ +K+ N + R F + F G LE + + + H
Sbjct: 389 VIIAILALMMVQSWVIMYRKNQNVGRVSRANGLFRERFAEVGTRLELLADDRELAARLQH 448
Query: 81 NIGLAAIFMSAMSEWKKSCDKGARSP---IGIQDRIDRMMDVAIARELEEITEKLSFLGS 137
+ L ++ A+ E + ++GA + + I MD +E +++ +LS L +
Sbjct: 449 S-SLWRLYQVAVKEIRTRREQGADTSSVSAATIEAIRASMDGVRTKENQQLGSRLSSLSN 507
Query: 138 MSSAGLLVGILGAVLGMMGFF--QSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIA 195
+ G +G+LG VLG+M F ++AG + N ++ PG+ +L++ +GL V+IP+
Sbjct: 508 AIAGGPYIGLLGTVLGIMVVFLGTAMAGDVNINAIA-PGMAAALLATAMGLFVAIPALFG 566
Query: 196 YNKFIEDSKKFAMQMEGFANEF 217
YN+ + +K+ + M F +EF
Sbjct: 567 YNRLVTRNKEVSADMRVFVDEF 588
>gi|255020534|ref|ZP_05292598.1| MotA/TolQ/ExbB proton channel family protein [Acidithiobacillus
caldus ATCC 51756]
gi|254970054|gb|EET27552.1| MotA/TolQ/ExbB proton channel family protein [Acidithiobacillus
caldus ATCC 51756]
Length = 205
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 65/122 (53%), Gaps = 12/122 (9%)
Query: 79 HHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSM 138
++ LA I ++A+ + A P +D I M++ A +E+ + L+FLGS+
Sbjct: 68 ENDTPLARILLTALQQ--------AGQP---RDVIKEMVEEAGRQEVAHLDRYLNFLGSI 116
Query: 139 SSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISILLGLCVSIPSSIAYN 197
+ L+G+LG V+G+M F +I + ++ GI E+LI+ GL V+IPS + Y
Sbjct: 117 AGVAPLLGLLGTVIGIMHAFAAIGMVGMGDPKALAGGIAEALITTAGGLSVAIPSLLFYR 176
Query: 198 KF 199
F
Sbjct: 177 YF 178
>gi|119470957|ref|ZP_01613541.1| putative Tol protein [Alteromonadales bacterium TW-7]
gi|119445979|gb|EAW27259.1| putative Tol protein [Alteromonadales bacterium TW-7]
Length = 455
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 52/88 (59%), Gaps = 1/88 (1%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
D ++ + AI RE+ +IT L+ + +S L+G+LG V GM+ FQ+I + + +
Sbjct: 339 DTLELKLSEAILREMPKITRNLTLIKIISVVAPLLGLLGTVTGMINTFQAITLFGTGDPK 398
Query: 171 SIP-GIIESLISILLGLCVSIPSSIAYN 197
+ GI ++L++ +LGL V+IP+ Y
Sbjct: 399 LMAGGISQALVTTVLGLVVAIPTVFIYT 426
>gi|167618681|ref|ZP_02387312.1| MotA/TolQ/ExbB proton channel family protein [Burkholderia
thailandensis Bt4]
Length = 235
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 91/209 (43%), Gaps = 11/209 (5%)
Query: 17 FMQMGLAV-KCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKS 75
+++ G AV + +L SI SW ++ K+ + +RQ FW +L+ +
Sbjct: 10 YLESGDAVTHAVAYVLLAMSIASWCFLLVKAWVLVRAKRQGPAALAAFWRAATLDDGLAA 69
Query: 76 LKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDV--AIARELEEITEKLS 133
L+ +F+ + + P + R++R V A+ L +L
Sbjct: 70 LRAADK---ERVFLPLAEAARDADAASRIEPHALAARVERGERVLRALRHALRASQRRLE 126
Query: 134 F----LGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCV 188
F L S+ S VG+LG V G+ SIA + ++ G + E+LI GL V
Sbjct: 127 FGQVLLASIGSTAPFVGLLGTVWGIYHALGSIAASGQAQIENVAGPVGEALIMTAFGLVV 186
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEF 217
+IP+ +AYN ++ +++GFA +
Sbjct: 187 AIPAVLAYNILGRLVRQLVEELDGFARDL 215
>gi|254420281|ref|ZP_05034005.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Brevundimonas sp. BAL3]
gi|196186458|gb|EDX81434.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Brevundimonas sp. BAL3]
Length = 576
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 54/106 (50%), Gaps = 1/106 (0%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI 172
I +D RE +++ + + L S G +G+LG VLG+M F S+A N+ +I
Sbjct: 452 IRSALDAGQVRESQKLNKWMVLLTIAISGGPFIGLLGTVLGVMITFASVAAAGEVNINAI 511
Query: 173 -PGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEF 217
PGI +L++ + GL V+IP+ YN + + + F +E
Sbjct: 512 APGIAAALLATVAGLAVAIPALFGYNYLLSRVEDVTADNQIFVDEL 557
>gi|254491815|ref|ZP_05104994.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Methylophaga thiooxidans DMS010]
gi|224463293|gb|EEF79563.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Methylophaga thiooxydans DMS010]
Length = 218
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 90/196 (45%), Gaps = 18/196 (9%)
Query: 31 LFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV----CKSLKNHHNIGLAA 86
LFI S++S ++I ++ + R E W + V K+L+ + +G
Sbjct: 15 LFICSVISIAIIAERFWSLQQKRIAPPELVTQIWQWLKYKQVDASRIKALQANSPLG--Q 72
Query: 87 IFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVG 146
I S + S + S I+D I R + VA+ R L+ LG++++ L+G
Sbjct: 73 ILASGLINRNSSREITKES---IED-IGRHVTVALER-------NLNTLGTVAAISPLIG 121
Query: 147 ILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISILLGLCVSIPSSIAYNKFIEDSKK 205
+LG V+GM+ F I N ++ GI E+LI+ GL V+IPS I Y F K
Sbjct: 122 LLGTVIGMIKVFAVITAEGVGNPETLAGGISEALITTATGLVVAIPSLIFYRYFRGKISK 181
Query: 206 FAMQMEGFANEFSAIL 221
+ ME A + IL
Sbjct: 182 LVVGMEEQAMQLIEIL 197
>gi|83721248|ref|YP_441756.1| MotA/TolQ/ExbB proton channel family protein [Burkholderia
thailandensis E264]
gi|167580571|ref|ZP_02373445.1| MotA/TolQ/ExbB proton channel family protein [Burkholderia
thailandensis TXDOH]
gi|257137923|ref|ZP_05586185.1| MotA/TolQ/ExbB proton channel family protein [Burkholderia
thailandensis E264]
gi|83655073|gb|ABC39136.1| MotA/TolQ/ExbB proton channel family protein [Burkholderia
thailandensis E264]
Length = 235
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 91/209 (43%), Gaps = 11/209 (5%)
Query: 17 FMQMGLAV-KCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKS 75
+++ G AV + +L SI SW ++ K+ + +RQ FW +L+ +
Sbjct: 10 YLESGDAVTHAVAYVLLAMSIASWCFLLVKAWVLVRAKRQGPAALAAFWRAATLDDGLAA 69
Query: 76 LKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDV--AIARELEEITEKLS 133
L+ +F+ + + P + R++R V A+ L +L
Sbjct: 70 LRAADK---ERVFLPLAEAARDADAASRIEPHALSARVERGERVLRALRHALRASQRRLE 126
Query: 134 F----LGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCV 188
F L S+ S VG+LG V G+ SIA + ++ G + E+LI GL V
Sbjct: 127 FGQVLLASIGSTAPFVGLLGTVWGIYHALGSIAASGQAQIENVAGPVGEALIMTAFGLVV 186
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEF 217
+IP+ +AYN ++ +++GFA +
Sbjct: 187 AIPAVLAYNILGRLVRQLVEELDGFARDL 215
>gi|226227416|ref|YP_002761522.1| putative biopolymer transport protein [Gemmatimonas aurantiaca
T-27]
gi|226090607|dbj|BAH39052.1| putative biopolymer transport protein [Gemmatimonas aurantiaca
T-27]
Length = 241
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 92/198 (46%), Gaps = 15/198 (7%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+ I L+ +MG K I+ L I S S ++IQK + + R+F F Q LE
Sbjct: 1 MDIMDLWHEMGWFAKGIVWTLLIMSAYSTGIMIQKWWQMRRAQGETRKFAPEF--SQFLE 58
Query: 71 --------TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIA 122
+ + K H +A + A+ E + G+ + I + +R ++ +
Sbjct: 59 EDNLTEAINLAEGYKKSH---VARVLGGALGEIRPLIQDGSVTVADI-NSAERAVEREML 114
Query: 123 RELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLIS 181
+ ++ L L ++ + VG++G +G++ F +++ + + S+ GI E+LI+
Sbjct: 115 MTVVDLKRGLGVLATVGATAPFVGLVGTTMGIVNSFTAMSTSGAGGISSMAAGIAEALIT 174
Query: 182 ILLGLCVSIPSSIAYNKF 199
+G+ V+IP+ +N F
Sbjct: 175 TAIGIGVAIPAVWGFNYF 192
>gi|291277164|ref|YP_003516936.1| ExbB/TolQ family transport protein [Helicobacter mustelae 12198]
gi|290964358|emb|CBG40208.1| putative exbB/tolQ family transport protein [Helicobacter mustelae
12198]
Length = 154
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 56/103 (54%), Gaps = 2/103 (1%)
Query: 115 RMMDVAIARELE-EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI- 172
R+ D RELE ++ +L+ + ++ S VG+LG V G+M F I+G N+ I
Sbjct: 35 RVDDYKDKRELELDLHRRLTLIATIGSNAPYVGLLGTVAGIMLTFIGISGSSVNDTSEIM 94
Query: 173 PGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFAN 215
G+ +L + +GL V+IPS + YN + S+ A + E + +
Sbjct: 95 KGLALALKATAMGLIVAIPSVVFYNMLVRKSEIIATKWEIYHH 137
>gi|198284047|ref|YP_002220368.1| MotA/TolQ/ExbB proton channel [Acidithiobacillus ferrooxidans ATCC
53993]
gi|218668040|ref|YP_002426695.1| MotA/TolQ/ExbB proton channel family protein [Acidithiobacillus
ferrooxidans ATCC 23270]
gi|198248568|gb|ACH84161.1| MotA/TolQ/ExbB proton channel [Acidithiobacillus ferrooxidans ATCC
53993]
gi|218520253|gb|ACK80839.1| MotA/TolQ/ExbB proton channel family protein [Acidithiobacillus
ferrooxidans ATCC 23270]
Length = 225
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 86/187 (45%), Gaps = 13/187 (6%)
Query: 27 IITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAA 86
I+ L+ I +++ +V I++ F+ L R R G + L N LA
Sbjct: 16 ILYLMPILLLIALTVSIER---FLFLNRMVR-------LGNEAALAVEDLPNLQGRALAE 65
Query: 87 IFMSAMSEWKKSCDKGARSPIGIQD--RIDRMMDVAIARELEEITEKLSFLGSMSSAGLL 144
I + ++ ++ R P I+D R+ ++ A+ R++ + ++L L ++ + L
Sbjct: 66 IAEKSAFPFRAILERPVRFP-HIKDSGRLSEILQEAVMRQVPVLDKRLWILDTIVTLAPL 124
Query: 145 VGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSK 204
+G+LG ++GM FQ + N + + E+L++ GL ++I +A+N +
Sbjct: 125 LGLLGTIIGMFHAFQVLNNAAQNPTLITGSVAEALLATAAGLIIAIVGLVAFNGLHNRMR 184
Query: 205 KFAMQME 211
QME
Sbjct: 185 YVVHQME 191
>gi|89899566|ref|YP_522037.1| MotA/TolQ/ExbB proton channel [Rhodoferax ferrireducens T118]
gi|89344303|gb|ABD68506.1| MotA/TolQ/ExbB proton channel [Rhodoferax ferrireducens T118]
Length = 217
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 88/214 (41%), Gaps = 12/214 (5%)
Query: 16 LFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ---LFWSGQSLETV 72
LF Q + + LL S+ SW VI+ K+ LRR + + FWS S+
Sbjct: 6 LFWQGDTLTRGVALLLLAMSVGSWVVIVWKA---WLLRRASADVVRSLAAFWSSISVAEA 62
Query: 73 CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQ-DRIDRMMDVAIARELEEITEK 131
L+ L + A K G S G + ++ R++ A+ L ++
Sbjct: 63 LHKLQAFDREALVIPMIVA----TKLEANGTLSSAGDKSQQLTRVLRDALHAALTKLHYG 118
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCVSI 190
L ++ + VG+LG V G+ IA + I G + E+LI GL V+I
Sbjct: 119 QVLLATVGATAPFVGLLGTVWGIYHALIGIANAGQVTIDKISGPVGEALIMTAAGLAVAI 178
Query: 191 PSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
P+ + YN + Q+EGFA + + Q
Sbjct: 179 PAVLGYNVLGRVIGRIEAQLEGFARDLRELAGTQ 212
>gi|56478316|ref|YP_159905.1| MotA/TolQ/ExbB proton channel family protein [Aromatoleum
aromaticum EbN1]
gi|56314359|emb|CAI09004.1| MotA/TolQ/ExbB proton channel family protein [Aromatoleum
aromaticum EbN1]
Length = 202
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 88/184 (47%), Gaps = 15/184 (8%)
Query: 31 LFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMS 90
L + S+++ ++II++ TLRR L L+ V L+ G A ++
Sbjct: 15 LLLASVIALALIIER---LTTLRRSRIAPPDL------LDKVLADLRQKGVSGEMANRVA 65
Query: 91 AMSEWKKSCDKGARSPIGIQDRIDRMMDVA---IARELEEITEKLSFLGSMSSAGLLVGI 147
A S K G R+ +D + ++ + +A ELE L+ LG++++ L+G+
Sbjct: 66 AHSPLGKVLAAGLRNVTSSRDVMKEAIEESGRVVAHELERF---LTTLGTIAAISPLMGL 122
Query: 148 LGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFA 207
G ++GM+ F S + +N GI +L S LGL ++IP++I + F F
Sbjct: 123 FGTIVGMIDIFASQSAAGTNPQQLAQGISTALNSTGLGLIIAIPATIFWRHFRALVDSFV 182
Query: 208 MQME 211
++ME
Sbjct: 183 IEME 186
>gi|269862177|ref|XP_002650735.1| TolQ protein [Enterocytozoon bieneusi H348]
gi|220065700|gb|EED43324.1| TolQ protein [Enterocytozoon bieneusi H348]
Length = 77
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 32/52 (61%)
Query: 173 PGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
P + E+LI+ GL +IP++ AYN++I K Q E F +EF+ IL RQ
Sbjct: 20 PPVAEALIATAAGLFAAIPATAAYNRYIHQLDKLDAQYEVFMDEFTNILHRQ 71
>gi|149920467|ref|ZP_01908935.1| MotA/TolQ/ExbB proton channel family protein [Plesiocystis pacifica
SIR-1]
gi|149818648|gb|EDM78093.1| MotA/TolQ/ExbB proton channel family protein [Plesiocystis pacifica
SIR-1]
Length = 221
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 106/225 (47%), Gaps = 25/225 (11%)
Query: 17 FMQMGL-AVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLF---WSGQSLETV 72
F+Q+ L ++ +L S+ S +++I++ + F ++ ++ + + +E
Sbjct: 7 FLQLALLGANWVLWILVALSVGSVAIVIERLMFFSSISKKDAGLMKGVADKLANDDIEGT 66
Query: 73 CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKL 132
K ++N + G A + +A+ + D+GA S + ++ A E + L
Sbjct: 67 AKLVENQPSPG-ARMLGAAL----EVADRGAPSAKAV-------LEGNRASEKLRLERNL 114
Query: 133 SFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVS--IPGIIESLISILLGLCV 188
FLG++ S +G+ G VL ++ F + +G + + S + GI E+L++ +GL V
Sbjct: 115 GFLGTVGSNAPFIGLFGTVLEILRVFNKLGESGVTTGDEASEIMTGISEALVATAIGLLV 174
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS-----RQTEGN 228
+IP+ IAYN F K+ + +G A LS R EG+
Sbjct: 175 AIPAVIAYNAFQRRVKRQLAEADGLTGMALAQLSALDRDRGDEGD 219
>gi|255067246|ref|ZP_05319101.1| TonB system transport protein ExbB [Neisseria sicca ATCC 29256]
gi|255048614|gb|EET44078.1| TonB system transport protein ExbB [Neisseria sicca ATCC 29256]
Length = 219
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/203 (19%), Positives = 93/203 (45%), Gaps = 3/203 (1%)
Query: 27 IITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNI--GL 84
+ L+ + SI++W +II +S+ + + + +L + +K+ +
Sbjct: 17 VFVLMLVMSIVTWCLIILRSIKLKKAKTANALVKTQMLNAFTLTEAVQKVKDIDAPMSRV 76
Query: 85 AAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLL 144
A + A +++S K + + + + + + ++ + + + ++ L S+ S
Sbjct: 77 ADESLRAYQSYRQSNAKTLTTELPLNEYLVIQIRNSMEQNMRQFDYGMTALASIGSTAPF 136
Query: 145 VGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCVSIPSSIAYNKFIEDS 203
+G+ G V G+ +I ++ ++ G I E+L+S +GL V+IP+ +AYN
Sbjct: 137 IGLFGTVWGIYHALINIGQSGQMSIAAVAGPIGEALVSTAIGLFVAIPAVLAYNFLNRGK 196
Query: 204 KKFAMQMEGFANEFSAILSRQTE 226
K + M+ FA++ L Q +
Sbjct: 197 KTLSQDMDAFAHDLHVRLLNQKD 219
>gi|89054621|ref|YP_510072.1| MotA/TolQ/ExbB proton channel [Jannaschia sp. CCS1]
gi|88864170|gb|ABD55047.1| outer membrane transport energization protein ExbB [Jannaschia sp.
CCS1]
Length = 228
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 83/179 (46%), Gaps = 17/179 (9%)
Query: 27 IITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE----TVCKSLKNHHNI 82
++ LL S+++ S+II K+ F LR +L +G +L+ + L
Sbjct: 20 VVALLLGMSLVALSLIIYKAAQF--LRAGVGRHSRLIRAGAALDRGDRAEARQLAGESRN 77
Query: 83 GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAG 142
LA +F S M R+ G + R++ V + L+ + + L S++
Sbjct: 78 HLAPVFESLMDRMADM-----RADTGFRARVE----VEASERLDHLEKGFRMLDSIAQIA 128
Query: 143 LLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKF 199
L+G+ G VLGM+ FQ++ AG + + GI +L++ GL V++P+S+ F
Sbjct: 129 PLLGLFGTVLGMIDAFQALQSAGDAVDPSILAGGIWVALMTTAAGLGVAMPTSLILTWF 187
>gi|159043122|ref|YP_001531916.1| MotA/TolQ/ExbB proton channel [Dinoroseobacter shibae DFL 12]
gi|157910882|gb|ABV92315.1| MotA/TolQ/ExbB proton channel [Dinoroseobacter shibae DFL 12]
Length = 230
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 51/96 (53%), Gaps = 2/96 (2%)
Query: 123 RELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLI 180
REL + L L +++ L+G+LG VLGM+ FQ++ AG ++ GI E+L+
Sbjct: 115 RELAQSRAGLRVLELIATIAPLIGLLGTVLGMIAAFQALQDAGARADPGTLAGGIWEALL 174
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANE 216
+ G+ V+IP+S+A + F + ME A
Sbjct: 175 TTAAGMAVAIPASMALSYFESVVDRIRQDMEDLATR 210
>gi|291513614|emb|CBK62824.1| outer membrane transport energization protein ExbB (TC 2.C.1.1.1)
[Alistipes shahii WAL 8301]
Length = 206
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 63/125 (50%), Gaps = 9/125 (7%)
Query: 111 DRIDRMM-DVAIA------RELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQ--SI 161
+RI R M DV A E+ ++ L FL +++ ++G LG VLGM+ F S
Sbjct: 81 ERIGRPMSDVQTAIENVANLEVSKLENGLPFLATIAGGAPMIGFLGTVLGMVQTFMDMSA 140
Query: 162 AGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
AG + + G+ ++++ ++GL V IP+ YN + +K QME + F IL
Sbjct: 141 AGGTVDLGLLSSGMYVAMVTTVMGLIVGIPAYFGYNYLVARIEKLVFQMEANSIAFMDIL 200
Query: 222 SRQTE 226
++ +
Sbjct: 201 NQPVQ 205
>gi|237654176|ref|YP_002890490.1| MotA/TolQ/ExbB proton channel [Thauera sp. MZ1T]
gi|237625423|gb|ACR02113.1| MotA/TolQ/ExbB proton channel [Thauera sp. MZ1T]
Length = 253
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 91/213 (42%), Gaps = 13/213 (6%)
Query: 16 LFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKS 75
L+ Q ++ + +L + SI SW +I+ +S+ + R E FW+ L+ +
Sbjct: 12 LWAQSDNIIRAVALILLVMSITSWYLILSRSLRQLRARSHSGAVEA-FWAAPDLDAGLRV 70
Query: 76 LKNHHN-------IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
L A + S G + + + I R + +IA +
Sbjct: 71 LAERAPESPFEALAQQGAAAAQHVRRHTHSNTLGGK--LDTDEVITRALRKSIALSTAAL 128
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQ--SIAGYYSNNVVSIPGIIESLISILLGL 186
L+ L S+ S VG+ G V G+ S++G + + V+ P + E+LI GL
Sbjct: 129 ESGLTVLASIGSTAPFVGLFGTVWGIYHALVNISVSGMATLDKVAGP-VGEALIMTAFGL 187
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
V+IP+ +AYN ++ +++ FA++ A
Sbjct: 188 FVAIPAVLAYNGITRANRVELSELDAFAHDLHA 220
>gi|167589397|ref|ZP_02381785.1| MotA/TolQ/ExbB proton channel [Burkholderia ubonensis Bu]
Length = 151
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 54/108 (50%), Gaps = 1/108 (0%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+R+ R + A+ R + L S+ S VG+LG V G+ SIA +
Sbjct: 35 ERVLRALRHAMLRSQRRLEFGQVLLASIGSTAPFVGLLGTVWGIYHALGSIAASGQAQIE 94
Query: 171 SIPGII-ESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEF 217
S+ G + E+LI GL V+IP+ +AYN ++ A +++GFA +
Sbjct: 95 SVAGPVGEALIMTAFGLVVAIPAVLAYNILGRLVRQLAEELDGFARDL 142
>gi|169633365|ref|YP_001707101.1| putative biopolymer transport protein (EXBB-like) [Acinetobacter
baumannii SDF]
gi|169152157|emb|CAP01059.1| putative biopolymer transport protein (EXBB-like) [Acinetobacter
baumannii]
Length = 211
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 97/185 (52%), Gaps = 17/185 (9%)
Query: 31 LFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS-LETVCKSLKNHHNIGLAAI-- 87
L + SIL+ ++ I++ F+ LRR + L G + + V +L+ +N A+
Sbjct: 15 LILCSILTVAISIER---FVRLRRSQVLPKVLMNDGSADISVVITNLEQDNNAQSTALGN 71
Query: 88 FMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGI 147
+ A E ++ ++ AR+ M+ ++E+ + + ++FLG++S+ L+G+
Sbjct: 72 ILKAGFEHQEHGEQFARA----------QMEAMASQEISYLEKNINFLGTLSAIAPLLGL 121
Query: 148 LGAVLGMMGFFQSIA-GYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKF 206
LG V+G++ F I G + + I GI ++LI+ +G+ ++IP+ I+Y F + +
Sbjct: 122 LGTVVGIIESFLVIDFGLAGSPSLMISGISKALITTAVGMLIAIPALISYRYFQRVVQDY 181
Query: 207 AMQME 211
++E
Sbjct: 182 IAELE 186
>gi|289548648|ref|YP_003473636.1| MotA/TolQ/ExbB proton channel [Thermocrinis albus DSM 14484]
gi|289182265|gb|ADC89509.1| MotA/TolQ/ExbB proton channel [Thermocrinis albus DSM 14484]
Length = 203
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 97/195 (49%), Gaps = 21/195 (10%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNF---ITLRRQFREFEQLFWSGQ 67
+ + L + GLAV LLF+ S++SW+++I++ +N I L R F++ + L G
Sbjct: 1 MPLLDLLQKGGLAVYV---LLFL-SVISWAIVIERLLNLRPSIFLSRSFKDLKTLLAGGD 56
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ E K L ++ + I + + +++ +Q+ +D +M +
Sbjct: 57 T-EGAIKLLSLDSSVA-SRILLRILEDYRTGRISKEDLMRALQEELDLVM--------PK 106
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA---GYYSNNVVSIPGIIESLISILL 184
+ + + L +++S LVG+ G + G++ F + + G + ++S GI E+L+S +
Sbjct: 107 LEKNIPLLSAIASLAPLVGLFGTITGLIKVFSAFSIEQGEQALRLLS-SGIGEALVSAAV 165
Query: 185 GLCVSIPSSIAYNKF 199
GL V+IP+ Y F
Sbjct: 166 GLAVAIPALFFYWVF 180
>gi|313159658|gb|EFR59016.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Alistipes sp. HGB5]
Length = 223
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 63/125 (50%), Gaps = 9/125 (7%)
Query: 111 DRIDRMM-DVAIA------RELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQ--SI 161
+RI R M DV A E+ ++ L FL +++ ++G LG VLGM+ F S
Sbjct: 98 ERIGRPMSDVQTAIENVANLEVSKLENGLPFLATIAGGAPMIGFLGTVLGMVQTFMDMSA 157
Query: 162 AGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
AG + + G+ ++++ ++GL V IP+ YN + +K QME + F IL
Sbjct: 158 AGGTVDLGLLSSGMYVAMVTTVMGLIVGIPAYFGYNYLVARIEKLVFQMEANSIAFMDIL 217
Query: 222 SRQTE 226
++ +
Sbjct: 218 NQPVQ 222
>gi|71275526|ref|ZP_00651812.1| MotA/TolQ/ExbB proton channel [Xylella fastidiosa Dixon]
gi|71900173|ref|ZP_00682313.1| MotA/TolQ/ExbB proton channel [Xylella fastidiosa Ann-1]
gi|170729260|ref|YP_001774693.1| biopolymer transport ExbB protein [Xylella fastidiosa M12]
gi|71163826|gb|EAO13542.1| MotA/TolQ/ExbB proton channel [Xylella fastidiosa Dixon]
gi|71730062|gb|EAO32153.1| MotA/TolQ/ExbB proton channel [Xylella fastidiosa Ann-1]
gi|167964053|gb|ACA11063.1| biopolymer transport ExbB protein [Xylella fastidiosa M12]
Length = 254
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 60/112 (53%), Gaps = 1/112 (0%)
Query: 107 IGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYS 166
+ + + +DR + A+ RE ++ ++ L ++ + VG+LG V G+ +I S
Sbjct: 132 LSLSEFVDRALRQAVTRESSKLQSGMTLLATVGATAPFVGLLGTVWGIYNALITIGATGS 191
Query: 167 NNVVSIPGII-ESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEF 217
++ ++ G + E+LI +GL V+IP+ A+N F + + + + FA++
Sbjct: 192 ASIDAVAGPVGEALIMTAIGLFVAIPAVFAFNFFSKINSSIIAKFDTFAHDL 243
>gi|307294040|ref|ZP_07573884.1| MotA/TolQ/ExbB proton channel [Sphingobium chlorophenolicum L-1]
gi|306880191|gb|EFN11408.1| MotA/TolQ/ExbB proton channel [Sphingobium chlorophenolicum L-1]
Length = 252
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 94/227 (41%), Gaps = 24/227 (10%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YGL Q G + +L S+ ++ ++ K + + Q ++
Sbjct: 15 NPYGL-------MEALEQGGTIAWTVFIILCGMSVGTFYILFTKLIEQQKVINQGKKVRA 67
Query: 62 LFWSGQSL-ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVA 120
FW +L E K KN + + A E K D P+ D + +
Sbjct: 68 TFWRAANLKEGTAKLEKNSAYKQIVDDGIKAQEEHTKLTD-----PVEAHD----WLHGS 118
Query: 121 IARELEEITEKL----SFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPG 174
+AR I KL +FL ++ S +G+ G V+G+ I AG S + V+ P
Sbjct: 119 LARSEASINSKLNGGLAFLATVGSTSPFIGLFGTVIGIYRALIKIGAAGQASIDAVAGP- 177
Query: 175 IIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+ E+LI LGL V++P+ +AYN +K Q+ GF + A L
Sbjct: 178 VGEALIMTALGLAVAVPAVLAYNFLQRRNKSIQEQLSGFTVDLLAYL 224
>gi|330809629|ref|YP_004354091.1| transport-related membrane protein ExbB2 [Pseudomonas
brassicacearum subsp. brassicacearum NFM421]
gi|327377737|gb|AEA69087.1| putative transport-related membrane protein ExbB2 [Pseudomonas
brassicacearum subsp. brassicacearum NFM421]
Length = 599
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 99/201 (49%), Gaps = 10/201 (4%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS-GQSLETVCKS---LKNHHN 81
II +L + SW ++I+K+ L F + F G LE + +
Sbjct: 370 VIIGVLVLMMFQSWIIMIRKNRMVSRLSAANDAFREQFAQIGTRLEMFADDQGLAQRLQH 429
Query: 82 IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRM---MDVAIARELEEITEKLSFLGSM 138
L +++ A+ E + ++GA + I+ + MD RE + ++ KLS L +
Sbjct: 430 SSLWRLYLVAVKEIRTRREQGADTSSVSAATIEAIRCSMDGVRTRENQALSSKLSTLSNA 489
Query: 139 SSAGLLVGILGAVLGMMGFF--QSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAY 196
+ G +G+LG VLG+M F ++AG + N ++ PG+ +L++ +GL V+IP+ Y
Sbjct: 490 IAGGPYIGLLGTVLGIMVVFLGTAMAGDVNINAIA-PGMAAALLATAMGLFVAIPALFGY 548
Query: 197 NKFIEDSKKFAMQMEGFANEF 217
N+ I +K+ + M F +EF
Sbjct: 549 NRLITRNKEVSADMRVFVDEF 569
>gi|149196305|ref|ZP_01873360.1| Biopolymer transport protein [Lentisphaera araneosa HTCC2155]
gi|149140566|gb|EDM28964.1| Biopolymer transport protein [Lentisphaera araneosa HTCC2155]
Length = 236
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 92/207 (44%), Gaps = 18/207 (8%)
Query: 25 KCIITLLFIFSILSWSVIIQKSVNFIT-LRRQFREFEQLFWSGQSLETVCKSLKNHHNIG 83
+ I+ LLF+ SI+SW ++++K + T L+ F+ QL G L + + H IG
Sbjct: 19 RFIVLLLFLVSIVSWFLMLEKWIEVKTALKNAFQLKSQLQDRGSCLLKCTQEFNSDHPIG 78
Query: 84 LAAIFMSAMSEWKKSCDKGARS----------PIGIQ----DRIDRMMDVAIARELEEIT 129
++ SA + P I + + + M+ A+ E+
Sbjct: 79 --KVYTSANHQLISLLHTNEHELLSFAHDNLLPRQISSIEIESVRKSMEQAVNDEILRYE 136
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYS-NNVVSIPGIIESLISILLGLCV 188
K+S L ++ S G+LG V G+M F +A + S N PGI +L++ + GL V
Sbjct: 137 GKMSSLSTIVSVSPFCGLLGTVYGVMTSFGGMAEHGSANIAAIAPGIAGALLTTVAGLLV 196
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFAN 215
+IPS + YN + M+ F +
Sbjct: 197 AIPSVVGYNLLTAKIRTLISHMDNFTD 223
>gi|297519725|ref|ZP_06938111.1| biopolymer transport protein ExbB [Escherichia coli OP50]
Length = 149
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 70/150 (46%), Gaps = 17/150 (11%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S++ ++ + VKC++ L + S+++W++ KSV F +R+ + +QL +SL
Sbjct: 9 DLSVWGMYQHADIVVKCVMIGLILASVVTWAIFFSKSVEFFNQKRRLKREQQLLAEARSL 68
Query: 70 ETV--------CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
KSL H + A +E + S +G+ GI++R ++ +
Sbjct: 69 NQANDIAADFGSKSLSLH-------LLNEAQNELELS--EGSDDNEGIKERTSFRLERRV 119
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAV 151
A ++ +L ++ + VG+ G V
Sbjct: 120 AAVGRQMGRGNGYLATIGAISPFVGLFGTV 149
>gi|94495911|ref|ZP_01302490.1| MotA/TolQ/ExbB proton channel [Sphingomonas sp. SKA58]
gi|94424603|gb|EAT09625.1| MotA/TolQ/ExbB proton channel [Sphingomonas sp. SKA58]
Length = 251
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 96/235 (40%), Gaps = 40/235 (17%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YGL Q G + +L S+ ++ ++ K + + Q ++
Sbjct: 14 NPYGL-------MEALEQGGTIAWTVFIILCAMSVGTFYILFTKLIEQQKVISQGKKVRA 66
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDV-- 119
FW SL L+ + S +K+ D G ++ Q+ ++ D
Sbjct: 67 TFWRSASLREASAKLEKN-------------SAYKQIVDDGIKA----QEEHGKLKDPVE 109
Query: 120 -------AIARELEEITEKL----SFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYS 166
++AR I L +FL ++ S +G+ G V+G+ I AG S
Sbjct: 110 AHDWLHGSLARSEGAINSSLNGGLAFLATVGSTSPFIGLFGTVIGIYRALIKIGAAGQAS 169
Query: 167 NNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+ V+ P + E+LI LGL V++P+ +AYN +K A Q+ GF + A L
Sbjct: 170 IDAVAGP-VGEALIMTALGLAVAVPAVLAYNFLQRRNKAIAEQLNGFTVDLLAYL 223
>gi|319785629|ref|YP_004145104.1| MotA/TolQ/ExbB proton channel [Pseudoxanthomonas suwonensis 11-1]
gi|317464141|gb|ADV25873.1| MotA/TolQ/ExbB proton channel [Pseudoxanthomonas suwonensis 11-1]
Length = 254
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 55/105 (52%), Gaps = 1/105 (0%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI 172
+DR + A+ RE + + L ++ + VG+LG V G+ G I S ++ ++
Sbjct: 138 VDRALRQAVTRESSRLQSGMVLLATVGATAPFVGLLGTVWGIYGALIKIGATGSASIDAV 197
Query: 173 PGII-ESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANE 216
G + E+LI +GL V+IP+ A+N F + + + + FA++
Sbjct: 198 AGPVGEALIMTAIGLFVAIPAVFAFNFFSKINSATIARFDSFAHD 242
>gi|296327926|ref|ZP_06870461.1| biopolymer transport ExbB protein [Fusobacterium nucleatum subsp.
nucleatum ATCC 23726]
gi|296154882|gb|EFG95664.1| biopolymer transport ExbB protein [Fusobacterium nucleatum subsp.
nucleatum ATCC 23726]
Length = 202
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 62/116 (53%), Gaps = 10/116 (8%)
Query: 91 AMSEWKKSCDKGA------RSPIGI--QDRIDRMMDVAIARELEEITEKLSFLGSMSSAG 142
A+ + KKSC A ++P GI QD + ++ +E+ +L+ L S+ S
Sbjct: 62 ALCDTKKSCVASAVRKFLQKAPKGIDVQDY-EFILKEVTNQEISPYERRLNLLASVMSIS 120
Query: 143 LLVGILGAVLGMMGFFQSIAGYYSNN-VVSIPGIIESLISILLGLCVSIPSSIAYN 197
++G+LG V GM+ F +I+ Y + + V GI E+L++ GL ++IP + YN
Sbjct: 121 PMLGLLGTVTGMIRAFTNISKYGAGDAAVVADGIAEALLTTAAGLMIAIPVIVVYN 176
>gi|126662332|ref|ZP_01733331.1| putative biopolymer transport protein [Flavobacteria bacterium
BAL38]
gi|126625711|gb|EAZ96400.1| putative biopolymer transport protein [Flavobacteria bacterium
BAL38]
Length = 234
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 62/115 (53%), Gaps = 2/115 (1%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA-GYYSNNV 169
+ I+ ++ A EL ++ + S L ++S AG +VG LG VLGM+ F +A G V
Sbjct: 118 EDINTAIENAGNLELYKLEKNTSMLATISGAGPMVGFLGTVLGMILAFHKMASGGGQIEV 177
Query: 170 VSIP-GIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
++ GI ++ + ++GL V I + + YN + + K QME A +F +L+
Sbjct: 178 GALAEGIYTAMTTTVVGLVVGIIAYVGYNHLVVKTNKVVNQMEANAVDFLDLLNE 232
>gi|228472713|ref|ZP_04057471.1| MotA/TolQ/ExbB family biopolymer transport protein [Capnocytophaga
gingivalis ATCC 33624]
gi|228275764|gb|EEK14530.1| MotA/TolQ/ExbB family biopolymer transport protein [Capnocytophaga
gingivalis ATCC 33624]
Length = 231
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 99/217 (45%), Gaps = 15/217 (6%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+SI L GLA II +LF+ +S + ++S ++ F + S
Sbjct: 24 LSIMDLIFNGGLANSIIIGILFLMLAMSLYIYFERSFAIGAAKKIDSNFMNVIRDNISSG 83
Query: 71 TV--CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ K+L +N +A + +S K PI D I + ++ A + E+ ++
Sbjct: 84 RIEAAKNLCYQYNNPVARLVAKGISRIGK--------PI---DDIHKAIENAGSLEVYKL 132
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA--GYYSNNVVSIPGIIESLISILLGL 186
+ +S L +++ G ++G LG V+GM+ F ++A G ++ + GI ++ + + GL
Sbjct: 133 EKNVSLLATLAGVGPMIGFLGTVVGMVMSFHAMATSGGQADMSILAGGIYTAMTTTVAGL 192
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
V I + +AYN + ++E +F +L+
Sbjct: 193 IVGIVAYLAYNHLVMRINNVTQKLEATTVDFLDMLNE 229
>gi|323698829|ref|ZP_08110741.1| MotA/TolQ/ExbB proton channel [Desulfovibrio sp. ND132]
gi|323458761|gb|EGB14626.1| MotA/TolQ/ExbB proton channel [Desulfovibrio desulfuricans ND132]
Length = 481
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 55/106 (51%), Gaps = 1/106 (0%)
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGY-YSNNVVSIPGIIESLISI 182
EL + L F+ M++ L+G+LG V GM+ FQ++ + +N + GI E+LI+
Sbjct: 373 ELHRLESGLGFIAVMAAVAPLLGLLGTVTGMIDSFQAVTVFGTANPRIMSSGISEALITT 432
Query: 183 LLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
GL V+IP+ + + + + A ME F A+L+ + +
Sbjct: 433 QAGLGVAIPAMLLHQFLKQRVQGLASDMEQQCAAFQALLAANPDKD 478
>gi|261365668|ref|ZP_05978551.1| TonB system transport protein ExbB [Neisseria mucosa ATCC 25996]
gi|288565834|gb|EFC87394.1| TonB system transport protein ExbB [Neisseria mucosa ATCC 25996]
Length = 219
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/203 (19%), Positives = 94/203 (46%), Gaps = 3/203 (1%)
Query: 27 IITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNI--GL 84
+ L+ + SI++W +II +++ + E + + +L + +K+ + +
Sbjct: 17 VFVLMLLMSIVTWCLIILRTIKLKKAKSANAEVKTQMLNAFTLSEAVQKVKSIDSPMSRV 76
Query: 85 AAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLL 144
A + A +++S K + + + + + + ++ + + + ++ L S+ +
Sbjct: 77 ADESLRAYQSYRQSNAKTLTTELPLNEYLVIQIRNSMEQAMRQFDYGMTALASIGATAPF 136
Query: 145 VGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCVSIPSSIAYNKFIEDS 203
+G+ G V G+ +I ++ ++ G I E+L+S GL V+IP+ +AYN
Sbjct: 137 IGLFGTVWGIYHALINIGQSGQMSIAAVAGPIGEALVSTAAGLFVAIPAVLAYNFLNRGK 196
Query: 204 KKFAMQMEGFANEFSAILSRQTE 226
K + M+ FA++ L Q +
Sbjct: 197 KTLSQDMDAFAHDLHVRLLNQKD 219
>gi|323138337|ref|ZP_08073408.1| MotA/TolQ/ExbB proton channel [Methylocystis sp. ATCC 49242]
gi|322396420|gb|EFX98950.1| MotA/TolQ/ExbB proton channel [Methylocystis sp. ATCC 49242]
Length = 219
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 91/199 (45%), Gaps = 32/199 (16%)
Query: 9 MDIS---IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS 65
MDIS +FM G+ K ++ LL + S+ +W +II F+ R
Sbjct: 1 MDISSMSPVGMFMNAGVVSKVVMALLLVASVWTWVLIIDGV--FVVFR------------ 46
Query: 66 GQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSP----IGIQDRIDRMMDVAI 121
+ +++ + + G + S K+ D R P + ++R+ + M+ A
Sbjct: 47 ------ISRAIDSARSGGPEGVLWPITSAGMKALD--VRVPDETALEKRERVFQHMNRA- 97
Query: 122 ARELEEITEK-LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESL 179
ARE I + L L +SS G VG+ G V G++ F IA ++ V PGI E+L
Sbjct: 98 AREFMTIAKGGLPNLAIVSSVGPFVGLFGTVWGIISSFSGIAQTQDTSLAVVAPGIAEAL 157
Query: 180 ISILLGLCVSIPSSIAYNK 198
+ GL +IP++I YN+
Sbjct: 158 AATAYGLAAAIPAAIGYNR 176
>gi|188997280|ref|YP_001931531.1| MotA/TolQ/ExbB proton channel [Sulfurihydrogenibium sp. YO3AOP1]
gi|188932347|gb|ACD66977.1| MotA/TolQ/ExbB proton channel [Sulfurihydrogenibium sp. YO3AOP1]
Length = 147
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCV 188
++L L + + +G+ G VLG++ F S+A V V + GI E+L++ +GL V
Sbjct: 61 KRLGILATFGNNAPFIGLFGTVLGIIKAFHSLATSTEFGVRVVMAGISEALVATAMGLFV 120
Query: 189 SIPSSIAYNKFIEDSKKFAMQME 211
+IP+ IAYN F+ +K M E
Sbjct: 121 AIPAVIAYNYFVRKAKFLMMVYE 143
>gi|331007789|ref|ZP_08330903.1| MotA/TolQ/ExbB proton channel family protein [gamma proteobacterium
IMCC1989]
gi|330418398|gb|EGG92950.1| MotA/TolQ/ExbB proton channel family protein [gamma proteobacterium
IMCC1989]
Length = 74
Score = 49.7 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 27/71 (38%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 155 MGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGF 213
M F+ +A + ++ PGI E+LI+ +GL +IP+ +AYN+F ++ A E F
Sbjct: 1 MNSFRGLANATQATLATVAPGISEALIATAMGLFAAIPAVLAYNRFSARAETLANSYETF 60
Query: 214 ANEFSAILSRQ 224
A EF +IL RQ
Sbjct: 61 AEEFISILQRQ 71
>gi|254514451|ref|ZP_05126512.1| MotA/TolQ/ExbB proton channel [gamma proteobacterium NOR5-3]
gi|219676694|gb|EED33059.1| MotA/TolQ/ExbB proton channel [gamma proteobacterium NOR5-3]
Length = 207
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 52/91 (57%), Gaps = 1/91 (1%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
+D + ++ A + E+ L+ LG++++ L+G+LG V+GM+ F I + N
Sbjct: 85 RDVMKESIEEAAGHVVHELERYLNTLGTIAAIAPLLGLLGTVVGMIRVFAEIMSQGTGNA 144
Query: 170 VSIP-GIIESLISILLGLCVSIPSSIAYNKF 199
++ GI E+LI+ GLCV+IP+ + + F
Sbjct: 145 SALAGGISEALITTAAGLCVAIPALVMHRYF 175
>gi|171057168|ref|YP_001789517.1| MotA/TolQ/ExbB proton channel [Leptothrix cholodnii SP-6]
gi|170774613|gb|ACB32752.1| MotA/TolQ/ExbB proton channel [Leptothrix cholodnii SP-6]
Length = 233
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 87/204 (42%), Gaps = 7/204 (3%)
Query: 25 KCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSL--KNHHNI 82
+ + LL S+ +W +I KS RR FW L+ + L ++ +
Sbjct: 16 RGVALLLLAMSVSAWVLIFWKSWVLGRARRDLAVVVPAFWRAPDLDAGQRLLASRDREQL 75
Query: 83 GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAG 142
L + + + + G + Q ++ R + A+ L ++ + L S+ +
Sbjct: 76 LLPLLDAALRPVSADTLEAGTHT----QAQLTRRLRDALHGVLAQLQQGQVLLASVGATA 131
Query: 143 LLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCVSIPSSIAYNKFIE 201
+G+ G V G+ I+ S ++ + G + E+LI GL V+IP+ +AYN F +
Sbjct: 132 PFIGLFGTVWGIYHALLGISAAGSVSIDKVAGPVGEALIMTAAGLAVAIPAVLAYNLFGK 191
Query: 202 DSKKFAMQMEGFANEFSAILSRQT 225
+EG+A++ +L Q
Sbjct: 192 WVGACEADLEGYAHDLREMLVEQA 215
>gi|283781940|ref|YP_003372695.1| MotA/TolQ/ExbB proton channel [Pirellula staleyi DSM 6068]
gi|283440393|gb|ADB18835.1| MotA/TolQ/ExbB proton channel [Pirellula staleyi DSM 6068]
Length = 277
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 62/119 (52%), Gaps = 6/119 (5%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA--GYYSNN 168
D+ M E+ ++ ++LS +G + S +VG+LG V GM+ FQ IA G
Sbjct: 159 DKATTAMGQVAEEEIMKLEQRLSLIGLVGSISPMVGLLGTVDGMVASFQVIAMSGATPKA 218
Query: 169 VVSIPGIIESLISILLGLCVSIPSSIAY----NKFIEDSKKFAMQMEGFANEFSAILSR 223
GI +LI+ L+GL ++IP++IA+ N+ + +++ +Q + + F + +
Sbjct: 219 SDLAEGISMALITTLVGLVLAIPATIAFALFKNRLSKLTQELGVQADNLMSRFETVAKK 277
>gi|237744147|ref|ZP_04574628.1| biopolymer transport exbB protein [Fusobacterium sp. 7_1]
gi|256027740|ref|ZP_05441574.1| biopolymer transport exbB protein [Fusobacterium sp. D11]
gi|289765697|ref|ZP_06525075.1| biopolymer transport exbB protein [Fusobacterium sp. D11]
gi|229431376|gb|EEO41588.1| biopolymer transport exbB protein [Fusobacterium sp. 7_1]
gi|289717252|gb|EFD81264.1| biopolymer transport exbB protein [Fusobacterium sp. D11]
Length = 202
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 69/142 (48%), Gaps = 10/142 (7%)
Query: 91 AMSEWKKSCDKGA------RSPIGI--QDRIDRMMDVAIARELEEITEKLSFLGSMSSAG 142
A+ + KKSC A ++P GI QD + ++ I +E +L+ L S+ S
Sbjct: 62 ALCDTKKSCVASAVKKFLQKAPRGIDVQDYEFILKEITI-KETSPYESRLNLLASVISIS 120
Query: 143 LLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISILLGLCVSIPSSIAYNKFIE 201
++G+LG V GM+ F +I+ Y + + + GI E+L++ GL ++IP + YN
Sbjct: 121 PMLGLLGTVTGMIRAFTNISKYGTGDAAIVADGIAEALLTTAAGLMIAIPVIVVYNYLNR 180
Query: 202 DSKKFAMQMEGFANEFSAILSR 223
+K +++ I R
Sbjct: 181 RLEKMENEIDDVVTNIINIFRR 202
>gi|257125314|ref|YP_003163428.1| MotA/TolQ/ExbB proton channel [Leptotrichia buccalis C-1013-b]
gi|257049253|gb|ACV38437.1| MotA/TolQ/ExbB proton channel [Leptotrichia buccalis C-1013-b]
Length = 208
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 95/198 (47%), Gaps = 20/198 (10%)
Query: 35 SILSWSVIIQKSVNFITLRRQFREFEQ--LFWS-----GQSLETVCKSLKNHHNIGLAAI 87
SI ++I++K+ F+T ++ E E+ L+ S + + +CK + + + I
Sbjct: 19 SICGLAIILEKTYTFLTKEKKLTENEKNKLYKSLRTGNREEILRLCKDKTDSVSKSVTKI 78
Query: 88 FMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGI 147
+S M D R I + ++ +I + E+ + +S LG++ +A +G+
Sbjct: 79 -VSNMDINFAELDNSHRQVI------EGIISESILEQTTELEKGMSLLGTVVNAAPQLGL 131
Query: 148 LGAVLGMMGFFQSIA--GYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKK 205
LG V GM+ F ++ G + +V+ GI E+L + GL V+IP+ + YN F
Sbjct: 132 LGTVTGMITAFSALTRNGESTARIVA-SGISEALYTTAFGLIVAIPALVFYNYFNRQIDI 190
Query: 206 FAMQMEGFANEFSAILSR 223
+ME A +F LSR
Sbjct: 191 IVAEMERAALQF---LSR 205
>gi|28197955|ref|NP_778269.1| biopolymer transport ExbB protein [Xylella fastidiosa Temecula1]
gi|71899727|ref|ZP_00681879.1| MotA/TolQ/ExbB proton channel [Xylella fastidiosa Ann-1]
gi|182680582|ref|YP_001828742.1| MotA/TolQ/ExbB proton channel [Xylella fastidiosa M23]
gi|28056015|gb|AAO27918.1| biopolymer transport ExbB protein [Xylella fastidiosa Temecula1]
gi|71730522|gb|EAO32601.1| MotA/TolQ/ExbB proton channel [Xylella fastidiosa Ann-1]
gi|182630692|gb|ACB91468.1| MotA/TolQ/ExbB proton channel [Xylella fastidiosa M23]
gi|307579034|gb|ADN63003.1| biopolymer transport ExbB protein [Xylella fastidiosa subsp.
fastidiosa GB514]
Length = 254
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 60/112 (53%), Gaps = 1/112 (0%)
Query: 107 IGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYS 166
+ + + +DR + A+ RE ++ ++ L ++ + VG+LG V G+ +I S
Sbjct: 132 LSLSEFVDRALRQAVTRESSKLQSGMTLLATVGATAPFVGLLGTVWGIYNALITIGATGS 191
Query: 167 NNVVSIPGII-ESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEF 217
++ ++ G + E+LI +GL V+IP+ A+N F + + + + FA++
Sbjct: 192 ASIDAVAGPVGEALIMTAIGLFVAIPAVFAFNFFSKINSSTIAKFDTFAHDL 243
>gi|258405043|ref|YP_003197785.1| MotA/TolQ/ExbB proton channel [Desulfohalobium retbaense DSM 5692]
gi|257797270|gb|ACV68207.1| MotA/TolQ/ExbB proton channel [Desulfohalobium retbaense DSM 5692]
Length = 200
Score = 49.3 bits (116), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 92/195 (47%), Gaps = 27/195 (13%)
Query: 34 FSILSWSVIIQKSVNFITLR----RQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFM 89
FSIL +VI+ + + + R + ++L G+ E K+L G A +F+
Sbjct: 17 FSILILAVILDRLLALASFRMLAPAMVSQVKELIREGR--EDEAKALLEEEGPGSARMFL 74
Query: 90 SAMS-EWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGIL 148
+ +S E +K ++ A R + L + +L L + ++A L+G+L
Sbjct: 75 AIVSVEGRKRREQAA-------SRTGEAL-------LFHLGRRLPVLSAGAAAAPLMGLL 120
Query: 149 GAVLGMMGFFQSIAGYYSNNVVSI--PGIIESLISILLGLCVSIPSSIAYNKFI--EDSK 204
G VLGM+ F ++ +++ GI ++L++ GL V+IPS +AY+ I +D
Sbjct: 121 GTVLGMINVFSRVSSAPGGVDIALLADGIWQALLTTAAGLGVAIPSLLAYHFLIRLQDKI 180
Query: 205 KFAMQMEG--FANEF 217
F M EG F +E
Sbjct: 181 GFRMAHEGQNFVDEL 195
>gi|94309482|ref|YP_582692.1| MotA/TolQ/ExbB proton channel [Cupriavidus metallidurans CH34]
gi|93353334|gb|ABF07423.1| biopolymer transport channel protein [Cupriavidus metallidurans
CH34]
Length = 206
Score = 49.3 bits (116), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 100/204 (49%), Gaps = 24/204 (11%)
Query: 31 LFIFSILSWSVIIQKSVNFITLRR----QFREFEQLFWSGQ---SLETVCKSLKNHHNIG 83
L + S+++ ++I+++ FI+L+R + +E+ + Q + V +L+ + +G
Sbjct: 15 LLLASVIALALIVER---FISLKRSKILPPKLYEEALSAAQQRRATPEVVNNLEQNSPLG 71
Query: 84 --LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSA 141
LAA + + + S D +D ++ V +A ELE L+ LG+++S
Sbjct: 72 RVLAAGLRHVVLQPQTSRDAA-------KDVVEEAGRV-VAHELERY---LNALGTIASV 120
Query: 142 GLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIE 201
L+G+LG V+GM+ F + G +N GI +L + GL V+IP+ I + F
Sbjct: 121 APLMGLLGTVIGMIEIFGNQGGTGANPEQLAHGISVALYNTAFGLIVAIPALIFWRYFRR 180
Query: 202 DSKKFAMQMEGFANEF-SAILSRQ 224
+ ++E A F AIL ++
Sbjct: 181 RVDDYVAELEFRATSFLDAILPQR 204
>gi|19704647|ref|NP_604209.1| biopolymer transport exbB protein [Fusobacterium nucleatum subsp.
nucleatum ATCC 25586]
gi|19714951|gb|AAL95508.1| Biopolymer transport exbB protein [Fusobacterium nucleatum subsp.
nucleatum ATCC 25586]
Length = 202
Score = 49.3 bits (116), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 62/116 (53%), Gaps = 10/116 (8%)
Query: 91 AMSEWKKSCDKGA------RSPIGI--QDRIDRMMDVAIARELEEITEKLSFLGSMSSAG 142
A+ + KKSC A ++P GI QD + ++ +E+ +L+ L S+ S
Sbjct: 62 ALCDTKKSCVASAVRKFLQKAPKGIDVQDY-EFILKEVTNQEISPYERRLNLLASVMSIS 120
Query: 143 LLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISILLGLCVSIPSSIAYN 197
++G+LG V GM+ F +I+ Y + + + GI E+L++ GL ++IP + YN
Sbjct: 121 PMLGLLGTVTGMIRAFTNISKYGAGDAAIVADGIAEALLTTAAGLMIAIPVIVVYN 176
>gi|15836615|ref|NP_297303.1| biopolymer transport ExbB protein [Xylella fastidiosa 9a5c]
gi|9104772|gb|AAF82823.1|AE003856_2 biopolymer transport ExbB protein [Xylella fastidiosa 9a5c]
Length = 254
Score = 49.3 bits (116), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 60/112 (53%), Gaps = 1/112 (0%)
Query: 107 IGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYS 166
+ + + +DR + A+ RE ++ ++ L ++ + VG+LG V G+ +I S
Sbjct: 132 LSLSEFVDRALRQAVTRESSKLQSGMTLLATVGATAPFVGLLGTVWGIYNALITIGATGS 191
Query: 167 NNVVSIPGII-ESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEF 217
++ ++ G + E+LI +GL V+IP+ A+N F + + + + FA++
Sbjct: 192 ASIDAVAGPVGEALIMTAIGLFVAIPAVFAFNFFSKINSSTIAKFDTFAHDL 243
>gi|53805021|ref|YP_113146.1| MotA/TolQ/ExbB proton channel family protein [Methylococcus
capsulatus str. Bath]
gi|53758782|gb|AAU93073.1| MotA/TolQ/ExbB proton channel family domain protein [Methylococcus
capsulatus str. Bath]
Length = 204
Score = 49.3 bits (116), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 62/119 (52%), Gaps = 2/119 (1%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYS--N 167
++ + R ++ A + + + L+ LG+++S +G+LG+VLGMM F + + N
Sbjct: 85 REVMQRCIEQAGRQVVHAMERYLNTLGTIASISPYLGLLGSVLGMMKVFAGFSAAHGAGN 144
Query: 168 NVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
V G+ E LI+ GL V+IPS + Y F + +M++E A A+L + E
Sbjct: 145 PAVLAGGLSEILITTAAGLAVAIPSLMFYRYFRGRVNELSMRLEEEAVRLIAVLHGERE 203
>gi|110597025|ref|ZP_01385314.1| MotA/TolQ/ExbB proton channel [Chlorobium ferrooxidans DSM 13031]
gi|110341216|gb|EAT59681.1| MotA/TolQ/ExbB proton channel [Chlorobium ferrooxidans DSM 13031]
Length = 249
Score = 49.3 bits (116), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 67/136 (49%), Gaps = 13/136 (9%)
Query: 78 NHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDR------IDRMMDVAIARELEEITEK 131
+ H LAA+ S + +KK + + DR +++ ++ A E+ + +
Sbjct: 98 DDHQSSLAAVLRSVLERYKK------LAQFNVTDREKKISEMEKAVEEATIMEMPLLEKN 151
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISILLGLCVSI 190
L + +++S +VG+LG LGM+ F ++A + + V + GI E+L + LG+C I
Sbjct: 152 LVAISTIASISTMVGLLGTTLGMIRAFAAMATSGAPDAVQLSLGISEALFNTALGICGGI 211
Query: 191 PSSIAYNKFIEDSKKF 206
+AYN F +F
Sbjct: 212 MGIVAYNIFTSRVDRF 227
>gi|327399148|ref|YP_004340017.1| MotA/TolQ/ExbB proton channel [Hippea maritima DSM 10411]
gi|327181777|gb|AEA33958.1| MotA/TolQ/ExbB proton channel [Hippea maritima DSM 10411]
Length = 191
Score = 49.3 bits (116), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 84/201 (41%), Gaps = 27/201 (13%)
Query: 17 FMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSL 76
F +G ++ +L + S+ SW+ I K + L R+ + F F +ET K+
Sbjct: 8 FSHVGSVAVAVLIILAVMSVFSWAFIFYKWLQLKGLDRKNKVFLNKF-----IETKDKT- 61
Query: 77 KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDV---AIARELEEITEKLS 133
++ + K+ D A + IARELE
Sbjct: 62 --------------SLEAFAKASDSIAGKLYLLNKESSSSAFTFFEMIARELEG---GFP 104
Query: 134 FLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCVSIPS 192
+L S+ + VG+ G V G++ F +I S + ++ PGI E+LI+ G+ V++P+
Sbjct: 105 WLASVGATAPFVGLFGTVWGIINAFNNIGNVQSVTIATVAPGISEALITTAAGIFVAVPA 164
Query: 193 SIAYNKFIEDSKKFAMQMEGF 213
I YN +++GF
Sbjct: 165 VIGYNILHTKLSSLLNELDGF 185
>gi|218781363|ref|YP_002432681.1| MotA/TolQ/ExbB proton channel [Desulfatibacillum alkenivorans
AK-01]
gi|218762747|gb|ACL05213.1| MotA/TolQ/ExbB proton channel [Desulfatibacillum alkenivorans
AK-01]
Length = 489
Score = 49.3 bits (116), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 49/79 (62%), Gaps = 3/79 (3%)
Query: 120 AIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQ--SIAGYYSNNVVSIPGIIE 177
AI R++ + L LG +++ L+G+LG V GM+ F ++AG ++S GI E
Sbjct: 373 AILRQIPRLERFLPTLGMLAAIAPLLGLLGTVTGMINTFHVITVAGTGDPRLMS-GGISE 431
Query: 178 SLISILLGLCVSIPSSIAY 196
+L++ +LGL V+IP ++A+
Sbjct: 432 ALVTTMLGLAVAIPVTVAH 450
>gi|326336141|ref|ZP_08202313.1| MotA/TolQ/ExbB proton channel family protein [Capnocytophaga sp.
oral taxon 338 str. F0234]
gi|325691650|gb|EGD33617.1| MotA/TolQ/ExbB proton channel family protein [Capnocytophaga sp.
oral taxon 338 str. F0234]
Length = 241
Score = 49.3 bits (116), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 98/217 (45%), Gaps = 15/217 (6%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+SI L GLA II +LF+ + + +++ +R F + S
Sbjct: 34 LSIMQLIFDGGLANTIIIGILFLMLATALYIYFERTFAIGAAKRIDTNFMNVIRDNISSG 93
Query: 71 TV--CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ K+L +N +A + +S K PI D I + ++ A + E+ ++
Sbjct: 94 RIDAAKNLCYQYNSPVARLVSKGLSRIGK--------PI---DDIRKAIENAGSLEVYKL 142
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA--GYYSNNVVSIPGIIESLISILLGL 186
+ +S L +++ G ++G LG V+GM+ F ++A G ++ + GI ++ + + GL
Sbjct: 143 EKNVSLLATLAGVGPMIGFLGTVVGMVMSFHAMATSGGQADMTILAGGIYTAMTTTVAGL 202
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
V I + +AYN + ++E +F +L+
Sbjct: 203 IVGIVAYLAYNHLVMRINNVTQKLEATTVDFLDMLNE 239
>gi|183221018|ref|YP_001839014.1| biopolymer transport ExbB protein [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
gi|189911112|ref|YP_001962667.1| biopolymer transport protein [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|106879690|emb|CAJ90414.1| biopolymer transport ExbB protein [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
gi|167775788|gb|ABZ94089.1| Biopolymer transport protein, TolQ-like protein [Leptospira biflexa
serovar Patoc strain 'Patoc 1 (Ames)']
gi|167779440|gb|ABZ97738.1| Biopolymer transport ExbB protein; putative membrane protein
[Leptospira biflexa serovar Patoc strain 'Patoc 1
(Paris)']
Length = 204
Score = 49.3 bits (116), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 96/209 (45%), Gaps = 32/209 (15%)
Query: 25 KCIITLLFIFSILSWSVIIQKSVNFITLR----RQFREFEQLFWSGQ---SLETVCKSLK 77
+ I L+ + SI+ +++I+++ V + L+ FR +L G+ + + + + ++
Sbjct: 18 QTIPILIILVSIVGFTIIVERLVYYWRLKSIPQDHFRRVRELAREGKWDDAKDVLSQEVQ 77
Query: 78 NHHNIGLAAIF---MSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSF 134
+ + L F +S W++ + I + +R L+
Sbjct: 78 SPAAVLLRMAFDLKRRGVSFWEEDIRQEGFRQIYLMERY------------------LTG 119
Query: 135 LGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSI 194
LG++++ L+G+LG V+G++ F AG V GI E+LI+ +GL ++IP+ I
Sbjct: 120 LGTIATIAPLLGVLGTVIGIVRSFAEGAGTQGAEV----GISEALITTAMGLAIAIPAYI 175
Query: 195 AYNKFIEDSKKFAMQMEGFANEFSAILSR 223
YN F ++ +ME + L+R
Sbjct: 176 FYNVFTRMKEEKITEMENVTDLVLPHLNR 204
>gi|189462958|ref|ZP_03011743.1| hypothetical protein BACCOP_03660 [Bacteroides coprocola DSM 17136]
gi|189430240|gb|EDU99224.1| hypothetical protein BACCOP_03660 [Bacteroides coprocola DSM 17136]
Length = 239
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 55/105 (52%), Gaps = 2/105 (1%)
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI--PGIIESLIS 181
E+ ++ LS + ++SS ++G LG V GM+ F ++A +N +++ GI E++I+
Sbjct: 134 EVAKLENGLSIMATISSGAPMLGFLGTVTGMVRAFWNMANAGNNIDITLLSSGIYEAMIT 193
Query: 182 ILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+ GL V I + AYN + K QME F +++ E
Sbjct: 194 TVGGLVVGIATMFAYNHLVYRVDKVVSQMEARTIAFMDLMNEPNE 238
>gi|254302837|ref|ZP_04970195.1| ligand gated channel protein TolQ [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
gi|148323029|gb|EDK88279.1| ligand gated channel protein TolQ [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
Length = 202
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 69/142 (48%), Gaps = 10/142 (7%)
Query: 91 AMSEWKKSCDKGA------RSPIGI--QDRIDRMMDVAIARELEEITEKLSFLGSMSSAG 142
A+ + KKSC A ++P GI QD + ++ I +E +L+ L S+ S
Sbjct: 62 ALCDTKKSCVASAVKKFLQKAPKGIDVQDYEFILKEITI-KETSPYESRLNLLASVISIS 120
Query: 143 LLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISILLGLCVSIPSSIAYNKFIE 201
++G+LG V GM+ F +I+ Y + + + GI E+L++ GL ++IP + YN
Sbjct: 121 PMLGLLGTVTGMIRAFTNISKYGAGDAAIVADGIAEALLTTAAGLMIAIPVIVVYNYLNR 180
Query: 202 DSKKFAMQMEGFANEFSAILSR 223
+K +++ I R
Sbjct: 181 RLEKMENEIDDVVTNIINIFRR 202
>gi|325298876|ref|YP_004258793.1| MotA/TolQ/ExbB proton channel [Bacteroides salanitronis DSM 18170]
gi|324318429|gb|ADY36320.1| MotA/TolQ/ExbB proton channel [Bacteroides salanitronis DSM 18170]
Length = 270
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 60/105 (57%), Gaps = 3/105 (2%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI-AGYYSNNVVS 171
I + ++ A A E+ + + L +G++++ G L+G+LG V+GM+ F ++ AG +++V
Sbjct: 156 IQKSLEEATALEMPMLQQNLPIIGTITTLGTLMGLLGTVIGMIRSFAALSAGGGTDSVAL 215
Query: 172 IPGIIESLISILLGLCVSIPSSIAYNKFIE--DSKKFAMQMEGFA 214
GI E+LI+ G+ + I+YN F D +++ GF+
Sbjct: 216 STGISEALINTAFGILTGALAVISYNYFTNKIDKLTYSLDEVGFS 260
>gi|70730188|ref|YP_259927.1| transport protein ExbB2 [Pseudomonas fluorescens Pf-5]
gi|68344487|gb|AAY92093.1| transport protein ExbB2 PA0693 [Pseudomonas fluorescens Pf-5]
Length = 605
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 61/103 (59%), Gaps = 3/103 (2%)
Query: 117 MDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFF--QSIAGYYSNNVVSIPG 174
MD RE ++++ KLS L + + G +G+LG VLG+M F ++AG + N ++ PG
Sbjct: 474 MDGVRTRENQQLSSKLSTLSNAIAGGPYIGLLGTVLGIMVVFLGTAMAGDVNINAIA-PG 532
Query: 175 IIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEF 217
+ +L++ +GL V+IP+ YN+ I +K+ M F +EF
Sbjct: 533 MAAALLATAMGLFVAIPALFGYNRLITRNKEVGADMRVFVDEF 575
>gi|77164131|ref|YP_342656.1| MotA/TolQ/ExbB proton channel [Nitrosococcus oceani ATCC 19707]
gi|254436272|ref|ZP_05049779.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Nitrosococcus oceani AFC27]
gi|76882445|gb|ABA57126.1| outer membrane transport energization protein ExbB [Nitrosococcus
oceani ATCC 19707]
gi|207089383|gb|EDZ66655.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Nitrosococcus oceani AFC27]
Length = 478
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 60/111 (54%), Gaps = 4/111 (3%)
Query: 117 MDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GI 175
+D AI RE+ I L L +++ L+G+LG V GM+ FQSI + + + + GI
Sbjct: 357 LDEAILREIPSIERGLPVLAILAAIAPLLGLLGTVTGMIETFQSITLFGTGDPKLMSGGI 416
Query: 176 IESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
++L++ LGL V+IP + ++ S + ++ E +AI++R E
Sbjct: 417 SQALVTTELGLAVAIPVLLIHSSLSSKSNRLVQVLD---EESAAIVARLAE 464
>gi|90407105|ref|ZP_01215294.1| MotA/TolQ/ExbB family proton channel protein [Psychromonas sp.
CNPT3]
gi|90311827|gb|EAS39923.1| MotA/TolQ/ExbB family proton channel protein [Psychromonas sp.
CNPT3]
Length = 237
Score = 48.9 bits (115), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 61/112 (54%), Gaps = 4/112 (3%)
Query: 114 DRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQ--SIAGYYSNNVVS 171
D+M A A+ ++ + S L ++ + ++GILG VLG++ F S+ G V
Sbjct: 102 DKMSAYADAK-IDNMARGQSVLDTIITMAPMLGILGTVLGIIDSFHILSLQGVDDPTAV- 159
Query: 172 IPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
+ GI ++LIS +GLCV++ + + YN F +K +++E EF+ + +
Sbjct: 160 VGGIAQALISTAMGLCVALLALLPYNLFRSFLQKLTLRLECVGTEFNHLCQQ 211
>gi|312890403|ref|ZP_07749940.1| outer membrane transport energization protein ExbB (TC 2.C.1.1.1)
[Mucilaginibacter paludis DSM 18603]
gi|311297173|gb|EFQ74305.1| outer membrane transport energization protein ExbB (TC 2.C.1.1.1)
[Mucilaginibacter paludis DSM 18603]
Length = 277
Score = 48.9 bits (115), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 58/107 (54%), Gaps = 11/107 (10%)
Query: 119 VAIARELEEIT--------EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+AI +++EE T + L+ + ++ S G L+G+LG VLGM+G F+++ + N
Sbjct: 157 LAIQKDIEEATSLEMPMLEQNLTIIATLVSLGTLMGLLGTVLGMIGAFRTMGAAGAPNAS 216
Query: 171 SIPG-IIESLISILLGLCVSIPSSIAYNKFIE--DSKKFAMQMEGFA 214
+ I E+LI+ LG+ S S + YN F D +A+ GF+
Sbjct: 217 ELSSHISEALINTFLGISTSAISIVMYNIFTSKIDKLTYAIDETGFS 263
>gi|34763646|ref|ZP_00144574.1| Biopolymer transport exbB protein [Fusobacterium nucleatum subsp.
vincentii ATCC 49256]
gi|237742306|ref|ZP_04572787.1| biopolymer transport exbB protein [Fusobacterium sp. 4_1_13]
gi|256845585|ref|ZP_05551043.1| tonB-system energizer ExbB [Fusobacterium sp. 3_1_36A2]
gi|27886655|gb|EAA23820.1| Biopolymer transport exbB protein [Fusobacterium nucleatum subsp.
vincentii ATCC 49256]
gi|229429954|gb|EEO40166.1| biopolymer transport exbB protein [Fusobacterium sp. 4_1_13]
gi|256719144|gb|EEU32699.1| tonB-system energizer ExbB [Fusobacterium sp. 3_1_36A2]
Length = 202
Score = 48.9 bits (115), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 95/206 (46%), Gaps = 23/206 (11%)
Query: 27 IITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAA 86
I+ +L I SI +++V++++ V F + G + + SL + I A
Sbjct: 11 ILWVLVIISIGAFAVVLERIVFFARNEKNI---------GDTFKDEILSLVANKKIDEAI 61
Query: 87 IFMSAMSEWKKSCDKGA------RSPIGI--QDRIDRMMDVAIARELEEITEKLSFLGSM 138
A+ + KKSC A ++P GI QD + ++ I +E +L+ L S+
Sbjct: 62 ----ALCDTKKSCVASAVKKFLQKAPKGIDVQDYEFILKEITI-KETSPYESRLNLLASV 116
Query: 139 SSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISILLGLCVSIPSSIAYN 197
S ++G+LG V GM+ F +I+ Y + + + GI E+L++ GL ++IP + YN
Sbjct: 117 ISISPMLGLLGTVTGMIRAFTNISKYGAGDAAIVADGIAEALLTTAAGLMIAIPVIVIYN 176
Query: 198 KFIEDSKKFAMQMEGFANEFSAILSR 223
+K +++ I R
Sbjct: 177 YLNRRLEKMENEIDDVVTNIINIFRR 202
>gi|294677897|ref|YP_003578512.1| biopolymer transport protein ExbB [Rhodobacter capsulatus SB 1003]
gi|294476717|gb|ADE86105.1| biopolymer transport protein ExbB [Rhodobacter capsulatus SB 1003]
Length = 261
Score = 48.9 bits (115), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 60/123 (48%), Gaps = 7/123 (5%)
Query: 108 GIQDRID---RMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGY 164
GI++R+ ++ AR ++ ++ +GS+ S VG+ G V G+M F IA
Sbjct: 126 GIKERVAIDLTRIEAGAARAMQS---GVTAVGSIGSTAPFVGLFGTVWGIMNAFVGIAES 182
Query: 165 YSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
S+N+ V PGI E+L++ LGL +IP+ + YN + + A LSR
Sbjct: 183 GSSNLAVVAPGIAEALMATALGLVAAIPAVLLYNHLTRAVGGYRAALTDAAALVERTLSR 242
Query: 224 QTE 226
+
Sbjct: 243 DLD 245
>gi|94499685|ref|ZP_01306222.1| TolR [Oceanobacter sp. RED65]
gi|94428439|gb|EAT13412.1| TolR [Oceanobacter sp. RED65]
Length = 452
Score = 48.9 bits (115), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 55/95 (57%), Gaps = 2/95 (2%)
Query: 117 MDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GI 175
+D A+ +EL E+ LS + +++ L+G+LG V GM+ FQSI + + + + GI
Sbjct: 343 LDEAVLKELPELERGLSLIKLLAAVAPLLGLLGTVTGMIATFQSITLFGTGDPKLMAGGI 402
Query: 176 IESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQM 210
++LI+ +LGL +IP +N F+ K +Q+
Sbjct: 403 SQALITTVLGLVAAIPLLFMHN-FLNTRSKEVIQV 436
>gi|260222013|emb|CBA31153.1| Biopolymer transport protein exbB [Curvibacter putative symbiont of
Hydra magnipapillata]
Length = 216
Score = 48.9 bits (115), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 88/207 (42%), Gaps = 13/207 (6%)
Query: 21 GLAVKCIITL-LFIFSILSWSVIIQKSVNFITLRRQFREFEQ---LFWSGQSLETVCKSL 76
G AV + L L SI +W VI KS L+R + + FW + +L
Sbjct: 10 GDAVHTAVALTLLCMSIAAWFVIFWKS---WLLQRALTDVSRSTAAFWQAADVTAALAAL 66
Query: 77 KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQ-DRIDRMMDVAIARELEEITEKLSFL 135
GL + A ++ G + G + ++ R++ + L+ + L
Sbjct: 67 PAFDREGLVLPLVQA----TQTQGTGTLAAAGDRGQQLTRVLRDGLHGVLQRLQSGQVLL 122
Query: 136 GSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCVSIPSSI 194
++ S VG+LG V G+ SI G ++ I G + E+LI GL V+IP+ +
Sbjct: 123 ATVGSTAPFVGLLGTVWGIYHALISITGGGQVSIDKISGPVGEALIMTAAGLAVAIPAVL 182
Query: 195 AYNKFIEDSKKFAMQMEGFANEFSAIL 221
AYN F + +EGFA + +L
Sbjct: 183 AYNVFGRLVARLEADLEGFALDLRELL 209
>gi|86160450|ref|YP_467235.1| MotA/TolQ/ExbB proton channel [Anaeromyxobacter dehalogenans 2CP-C]
gi|85776961|gb|ABC83798.1| MotA/TolQ/ExbB proton channel [Anaeromyxobacter dehalogenans 2CP-C]
Length = 233
Score = 48.9 bits (115), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 65/138 (47%), Gaps = 9/138 (6%)
Query: 85 AAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLS----FLGSMSS 140
A +F++ + G R+P ++I A+ RE +++ KL LG++ +
Sbjct: 75 ADVFLAGLVAVAPRPGPGGRTPAPTAEKIT----AAVERERQQVNLKLRRNLWILGTVGA 130
Query: 141 AGLLVGILGAVLGMMGFFQSIAGYYSNN-VVSIPGIIESLISILLGLCVSIPSSIAYNKF 199
VG+ G V+G+M F+ +A V GI E+L++ G+ V+I + + +N
Sbjct: 131 TAPFVGLFGTVVGIMHAFRQMAATGQGGFTVVAAGISEALVTTAGGIAVAIEAVVIFNFL 190
Query: 200 IEDSKKFAMQMEGFANEF 217
+K A+Q+ E+
Sbjct: 191 NVHVQKLALQLRLLTEEY 208
>gi|254786070|ref|YP_003073499.1| transporter proton channel domain containing protein
[Teredinibacter turnerae T7901]
gi|237684079|gb|ACR11343.1| transporter, proton channel domain containing protein
[Teredinibacter turnerae T7901]
Length = 450
Score = 48.9 bits (115), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VS 171
I R M I ++ I LS + +++ L+G+LG V+GM+G FQ+I + + + +
Sbjct: 333 ISRKMQEVIIHDMAGIRRGLSIVKVLAAVAPLMGLLGTVVGMIGTFQAITLFGTGDPKLM 392
Query: 172 IPGIIESLISILLGLCVSIP 191
GI ++LI+ +LGLC +IP
Sbjct: 393 AGGISQALITTVLGLCAAIP 412
>gi|46369620|gb|AAS89660.1| ExbB-like protein [Yersinia ruckeri]
Length = 153
Score = 48.9 bits (115), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/151 (19%), Positives = 70/151 (46%), Gaps = 2/151 (1%)
Query: 9 MDISIFALFMQMGLAVKCI-ITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
MD+S++ ++ + VK + I L+ + S+++WS++ K + RR+ + + S
Sbjct: 1 MDLSVWGMYQHADVVVKAVMIGLVLLASVVTWSILFSKGMELYRARRRLHQEHMVLGSAT 60
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+L + ++ + + +E ++ G+ G ++R M+ +A +
Sbjct: 61 NLNDALAQADDFAPESISGMLLRE-AENERQLSAGSSDNSGTKERASFRMERRVAAVSRQ 119
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFF 158
+ + FL ++ + VG+ G V G+M F
Sbjct: 120 MGKGTGFLATIGAISPFVGLFGTVWGIMNSF 150
>gi|254786553|ref|YP_003073982.1| transporter MotA/TolQ/ExbB proton channel family [Teredinibacter
turnerae T7901]
gi|237686534|gb|ACR13798.1| transporter, MotA/TolQ/ExbB proton channel family [Teredinibacter
turnerae T7901]
Length = 217
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 66/124 (53%), Gaps = 13/124 (10%)
Query: 77 KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAR-ELEEITEKLSFL 135
KN N A + SA++ + D+G+ ++ + R +AR E+EE L L
Sbjct: 67 KNQRN-ARALVMASALN----AFDQGSLGEADVRAEVGR-----VARNEIEEQQRYLRVL 116
Query: 136 GSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGLCVSIPSS 193
++ L+G+ G VLGM+ FQ++ AG N V GI ++L++ +GL V+IP S
Sbjct: 117 EVVAMVAPLLGLFGTVLGMISAFQAMEDAGAQVNPSVLSGGIWKALMTTAVGLAVAIPVS 176
Query: 194 IAYN 197
IA++
Sbjct: 177 IAHS 180
>gi|163760175|ref|ZP_02167258.1| MotA/TolQ/ExbB proton channel [Hoeflea phototrophica DFL-43]
gi|162282574|gb|EDQ32862.1| MotA/TolQ/ExbB proton channel [Hoeflea phototrophica DFL-43]
Length = 231
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 106/227 (46%), Gaps = 29/227 (12%)
Query: 17 FMQMGLAVKCIITLLFIFSILSWSVIIQKSVNF----ITLRRQFREFEQLFWSGQSLETV 72
F+ +G ++++L + SILS +VI+ K F I R + LF SG+ E
Sbjct: 14 FLSLG---GPVVSILIVVSILSLAVILLKFFQFARAGIGARSRSERAVALFVSGRVRE-- 68
Query: 73 CKSLKNHHNIGLAAIFMSAMS-EWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEK 131
L A I A+ K DK A I++R+ R +A R L E+
Sbjct: 69 AHDLAALGRNPTAVIVAQAIELVMAKRLDKQA-----IEERLTR---IATTR-LHELQSG 119
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGLCVS 189
FL S++ L+G+ G VLGM+ F+ + AG + + GI +L++ +GL ++
Sbjct: 120 FRFLDSVAQLAPLMGLFGTVLGMIEAFKDLQSAGDAVDPSLLAGGIWVALLTTAVGLAIA 179
Query: 190 IPSS--IAYNKFIEDSKKFAMQ------MEGFANEFSAILSRQTEGN 228
+P S +A+ + +S++ A+Q + G + S SR+T G
Sbjct: 180 MPVSLILAWFETRVESERVAVQTLTTDILTGVSPVVSEAPSRETVGE 226
>gi|237751764|ref|ZP_04582244.1| biopolymer transporter [Helicobacter bilis ATCC 43879]
gi|229373130|gb|EEO23521.1| biopolymer transporter [Helicobacter bilis ATCC 43879]
Length = 207
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 55/95 (57%), Gaps = 8/95 (8%)
Query: 115 RMMDVAIARELE-EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP 173
R+ D + RELE ++ ++L+ + ++ S VG+LG V+G+M F SI +N+++
Sbjct: 41 RLDDYSDKRELELDLHKRLTLVATIGSNAPYVGLLGTVIGIMLTFTSIG---ANSMLDTK 97
Query: 174 GIIESLISIL----LGLCVSIPSSIAYNKFIEDSK 204
GI+ L L LGL V+IPS + YN + ++
Sbjct: 98 GIMVGLAMALRATALGLVVAIPSIVFYNLLVRKAE 132
>gi|257469132|ref|ZP_05633226.1| biopolymer transport exbB protein [Fusobacterium ulcerans ATCC
49185]
gi|317063379|ref|ZP_07927864.1| biopolymer transport exbB protein [Fusobacterium ulcerans ATCC
49185]
gi|313689055|gb|EFS25890.1| biopolymer transport exbB protein [Fusobacterium ulcerans ATCC
49185]
Length = 203
Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 96/198 (48%), Gaps = 17/198 (8%)
Query: 28 ITLLFIF--SILSWSVIIQKSVNF-ITLRRQFR----EFEQLFWSGQSLETVCKSLKNHH 80
I + FI SI+ +V+I++ + F ++ R F E QL G E + L N+
Sbjct: 9 ILMYFILAMSIIGLAVVIERFIYFKLSERDSFNKINPELRQLIEKGSVKEAIV--LLNNQ 66
Query: 81 NIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSS 140
A + + ++ KS K P+ ++++ + +A LE+ LS + ++
Sbjct: 67 KASAARVLKDILIQYYKSNSK---DPVMLEEK-GKESAMAQVPLLEKHMWMLSLVAHITP 122
Query: 141 AGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKF 199
L+G+LG V GM+ FQ+++ + + + V GI E+L + GL V+IP++I YN F
Sbjct: 123 ---LLGLLGTVTGMIKAFQAVSVHGTGDASVLAKGISEALFTTAGGLFVAIPATIFYNYF 179
Query: 200 IEDSKKFAMQMEGFANEF 217
+ + ME + E
Sbjct: 180 NKKIDETINDMEKTSTEL 197
>gi|294785126|ref|ZP_06750414.1| biopolymer transport ExbB protein [Fusobacterium sp. 3_1_27]
gi|294486840|gb|EFG34202.1| biopolymer transport ExbB protein [Fusobacterium sp. 3_1_27]
Length = 202
Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 69/142 (48%), Gaps = 10/142 (7%)
Query: 91 AMSEWKKSCDKGA------RSPIGI--QDRIDRMMDVAIARELEEITEKLSFLGSMSSAG 142
A+ + KKSC A ++P GI QD + ++ I +E +L+ L S+ S
Sbjct: 62 ALCDTKKSCVASAVKKFLQKAPKGIDVQDYEFILKEITI-KETSPYESRLNLLASVISIS 120
Query: 143 LLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISILLGLCVSIPSSIAYNKFIE 201
++G+LG V GM+ F +I+ Y + + + GI E+L++ GL ++IP + YN
Sbjct: 121 PMLGLLGTVTGMIRAFTNISKYGAGDAAIVADGIAEALLTTAAGLMIAIPVIVIYNYLNR 180
Query: 202 DSKKFAMQMEGFANEFSAILSR 223
+K +++ I R
Sbjct: 181 RLEKMENEIDDVVTNIINIFRR 202
>gi|73540301|ref|YP_294821.1| MotA/TolQ/ExbB proton channel [Ralstonia eutropha JMP134]
gi|72117714|gb|AAZ59977.1| MotA/TolQ/ExbB proton channel [Ralstonia eutropha JMP134]
Length = 231
Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 56/106 (52%), Gaps = 4/106 (3%)
Query: 120 AIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESL 179
A+A ELE L+ LG+++S L+G+LG V+GM+ F S G +N GI +L
Sbjct: 127 AVAHELERY---LNALGTIASVAPLMGLLGTVIGMIEIFGSQGGTGANPEQLAHGISVAL 183
Query: 180 ISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEF-SAILSRQ 224
+ GL V+IP+ I + F + ++E A F AIL ++
Sbjct: 184 YNTAFGLIVAIPALIFWRYFRRRVDDYVAELEFRATAFLDAILPQR 229
>gi|56461218|ref|YP_156499.1| TonB system biopolymer transport component [Idiomarina loihiensis
L2TR]
gi|56180228|gb|AAV82950.1| TonB system biopolymer transport component [Idiomarina loihiensis
L2TR]
Length = 459
Score = 48.5 bits (114), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 56/102 (54%), Gaps = 1/102 (0%)
Query: 106 PIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYY 165
P + ++ + I RE+ +IT L+F+ +S L+G+LG V GM+ FQ+I +
Sbjct: 338 PQADTETLELKLSEGILREVPKITRNLTFIKIISVVAPLMGLLGTVTGMINTFQAITLFG 397
Query: 166 SNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKF 206
+ + + GI ++L++ +LGL V+IP ++ + SK
Sbjct: 398 TGDPKLMAGGISQALVTTVLGLVVAIPMTLLFATLHTRSKNL 439
>gi|229589913|ref|YP_002872032.1| putative transporter-like membrane protein [Pseudomonas fluorescens
SBW25]
gi|229361779|emb|CAY48661.1| putative transport-related membrane protein [Pseudomonas
fluorescens SBW25]
Length = 599
Score = 48.5 bits (114), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 61/103 (59%), Gaps = 3/103 (2%)
Query: 117 MDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFF--QSIAGYYSNNVVSIPG 174
MD RE + ++ KLS L + + G +G+LG VLG+M F ++AG + N ++ PG
Sbjct: 470 MDGVRTRENQALSSKLSTLSNAIAGGPYIGLLGTVLGIMVVFLGTAMAGDVNINAIA-PG 528
Query: 175 IIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEF 217
+ +L++ +GL V+IP+ YN+ I +K+ + M F +EF
Sbjct: 529 MAAALLATAMGLFVAIPALFGYNRLITRNKEVSADMRVFVDEF 571
>gi|53720548|ref|YP_109534.1| putative transport-related membrane protein [Burkholderia
pseudomallei K96243]
gi|53725687|ref|YP_104002.1| MotA/TolQ/ExbB proton channel family protein [Burkholderia mallei
ATCC 23344]
gi|67643541|ref|ZP_00442286.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
mallei GB8 horse 4]
gi|76810545|ref|YP_334825.1| MotA/TolQ/ExbB proton channel family protein [Burkholderia
pseudomallei 1710b]
gi|121599718|ref|YP_991722.1| MotA/TolQ/ExbB proton channel family protein [Burkholderia mallei
SAVP1]
gi|124384087|ref|YP_001027215.1| MotA/TolQ/ExbB proton channel family protein [Burkholderia mallei
NCTC 10229]
gi|126450341|ref|YP_001082167.1| MotA/TolQ/ExbB proton channel family protein [Burkholderia mallei
NCTC 10247]
gi|126455098|ref|YP_001067689.1| MotA/TolQ/ExbB proton channel family protein [Burkholderia
pseudomallei 1106a]
gi|134280497|ref|ZP_01767208.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei 305]
gi|166998534|ref|ZP_02264392.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
mallei PRL-20]
gi|167847308|ref|ZP_02472816.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Burkholderia pseudomallei B7210]
gi|167895897|ref|ZP_02483299.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Burkholderia pseudomallei 7894]
gi|167904282|ref|ZP_02491487.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Burkholderia pseudomallei NCTC 13177]
gi|167912543|ref|ZP_02499634.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Burkholderia pseudomallei 112]
gi|167920497|ref|ZP_02507588.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Burkholderia pseudomallei BCC215]
gi|217420858|ref|ZP_03452363.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei 576]
gi|237813819|ref|YP_002898270.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei MSHR346]
gi|242316904|ref|ZP_04815920.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei 1106b]
gi|254178827|ref|ZP_04885481.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
mallei ATCC 10399]
gi|254190926|ref|ZP_04897432.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei Pasteur 52237]
gi|254199076|ref|ZP_04905491.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei S13]
gi|254202721|ref|ZP_04909084.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
mallei FMH]
gi|254208062|ref|ZP_04914412.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
mallei JHU]
gi|254258328|ref|ZP_04949382.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei 1710a]
gi|254299273|ref|ZP_04966723.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei 406e]
gi|52210962|emb|CAH36950.1| putative transport-related membrane protein [Burkholderia
pseudomallei K96243]
gi|52429110|gb|AAU49703.1| MotA/TolQ/ExbB proton channel family protein [Burkholderia mallei
ATCC 23344]
gi|76579998|gb|ABA49473.1| MotA/TolQ/ExbB proton channel family protein [Burkholderia
pseudomallei 1710b]
gi|121228528|gb|ABM51046.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
mallei SAVP1]
gi|124292107|gb|ABN01376.1| MotA/TolQ/ExbB proton channel family protein [Burkholderia mallei
NCTC 10229]
gi|126228740|gb|ABN92280.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei 1106a]
gi|126243211|gb|ABO06304.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
mallei NCTC 10247]
gi|134248504|gb|EBA48587.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei 305]
gi|147746968|gb|EDK54045.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
mallei FMH]
gi|147751956|gb|EDK59023.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
mallei JHU]
gi|157808866|gb|EDO86036.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei 406e]
gi|157938600|gb|EDO94270.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei Pasteur 52237]
gi|160694741|gb|EDP84749.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
mallei ATCC 10399]
gi|169656906|gb|EDS88303.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei S13]
gi|217396270|gb|EEC36287.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei 576]
gi|237504130|gb|ACQ96448.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei MSHR346]
gi|238524909|gb|EEP88339.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
mallei GB8 horse 4]
gi|242140143|gb|EES26545.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei 1106b]
gi|243065219|gb|EES47405.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
mallei PRL-20]
gi|254217017|gb|EET06401.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei 1710a]
Length = 235
Score = 48.5 bits (114), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 57/119 (47%), Gaps = 7/119 (5%)
Query: 106 PIGIQDRIDRMMDV--AIARELEEITEKLSF----LGSMSSAGLLVGILGAVLGMMGFFQ 159
P + R++R V A+ L +L F L S+ S VG+LG V G+
Sbjct: 97 PHALAARVERGERVLRALRHALRASQRRLEFGQVLLASIGSTAPFVGLLGTVWGIYHALG 156
Query: 160 SIAGYYSNNVVSIPGII-ESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEF 217
SIA + ++ G + E+LI GL V+IP+ +AYN ++ +++GFA +
Sbjct: 157 SIAASGQAQIENVAGPVGEALIMTAFGLVVAIPAVLAYNILGRLVRQLVEELDGFARDL 215
>gi|124265413|ref|YP_001019417.1| putative transport-related membrane protein [Methylibium
petroleiphilum PM1]
gi|124258188|gb|ABM93182.1| putative transport-related membrane protein [Methylibium
petroleiphilum PM1]
Length = 221
Score = 48.5 bits (114), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 84/200 (42%), Gaps = 5/200 (2%)
Query: 24 VKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIG 83
+ + LL + S+ +W +I KS +R FW+ L L+
Sbjct: 11 TRLVAALLLLMSVSAWVLIFWKSWLLRRVRADLARAVPAFWAAPDLAAARTQLQIFDR-- 68
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQ-DRIDRMMDVAIARELEEITEKLSFLGSMSSAG 142
A + + +S G G + ++ R + A+ L ++ L S+ +
Sbjct: 69 -EAALVPLLDAGLQSARGGTLEAAGARASQLTRRLRDALHGVLMQLQFGQVLLASIGATA 127
Query: 143 LLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCVSIPSSIAYNKFIE 201
+G+ G V G+ IA + ++ I G + E+L+ GL V+IP+ +AYN F +
Sbjct: 128 PFIGLFGTVWGIYHALLGIAAAGNLSIDRISGPVGEALVMTAAGLAVAIPAVLAYNVFGK 187
Query: 202 DSKKFAMQMEGFANEFSAIL 221
++EGFA++ +L
Sbjct: 188 LVGACEAELEGFAHDLREML 207
>gi|283138918|gb|ADB12521.1| hypothetical protein [uncultured bacterium 9F08]
Length = 208
Score = 48.5 bits (114), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 55/103 (53%), Gaps = 1/103 (0%)
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGY-YSNNVVSIPGIIESLISILLG 185
E+ L+ LG+++S L+G+LG V+GM+ F +I N V GI E+LI+ G
Sbjct: 102 ELERFLNTLGTIASITPLLGLLGTVIGMIKVFAAITSQGVGNPAVLAGGISEALITTAAG 161
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
L V+IPS + Y F + ++ME A + ++ + E +
Sbjct: 162 LSVAIPSLMFYRYFRGKVEMLVIKMEEQALKLVEVIHGEREAD 204
>gi|209518569|ref|ZP_03267389.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. H160]
gi|209501019|gb|EEA01055.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. H160]
Length = 207
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 94/208 (45%), Gaps = 25/208 (12%)
Query: 27 IITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAA 86
I+ L + +L+ ++II+++ F R +L + L HH
Sbjct: 17 IMYPLSLLGVLALTIIIERAYVFA---RFASAPARLLQPTSGDDNRLDGLAPHHA----- 68
Query: 87 IFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVG 146
F + W D SP+ +++ + + I R++ L L ++ +A L+G
Sbjct: 69 -FRRMAAPWLPESD----SPLWLREASAQSIAAQIERDM---GRGLWLLETIVTAAPLLG 120
Query: 147 ILGAVLGMMGFFQSIAGYYSNNVVS----IPGIIESLISILLGLCVSIPSSIAYNKFIED 202
+LG ++GMM FQ G N +V G+ +SL++ +GL V++ + A+N F
Sbjct: 121 LLGTIVGMMKSFQLFGG---NGLVDPGGVTGGVAQSLVATAIGLIVAVFALFAFNYFSRR 177
Query: 203 SKKFAMQMEGFAN-EFSAI-LSRQTEGN 228
++ ++E FAN SA+ L R+ G
Sbjct: 178 LERLMDELELFANARLSALRLQREARGE 205
>gi|91793511|ref|YP_563162.1| MotA/TolQ/ExbB proton channel [Shewanella denitrificans OS217]
gi|91715513|gb|ABE55439.1| MotA/TolQ/ExbB proton channel [Shewanella denitrificans OS217]
Length = 488
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 57/111 (51%), Gaps = 4/111 (3%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQ--SIAGYYSN 167
Q R D ++D I + EI L+ + +S L+G+LG V GM+ F+ ++ G
Sbjct: 357 QQRDDLLLDSLIQTK-REIERGLTAIAVTASVAPLLGLLGTVSGMIQTFKLMTLFGAGDA 415
Query: 168 NVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFS 218
N VS GI ESL++ LGL V+IP+ IA+ F +E +A S
Sbjct: 416 NAVS-GGISESLVTTELGLIVAIPALIAHALMSRRCHHFMAGLESYAVALS 465
>gi|313674448|ref|YP_004052444.1| outer membrane transport energization protein exbb [Marivirga
tractuosa DSM 4126]
gi|312941146|gb|ADR20336.1| outer membrane transport energization protein ExbB [Marivirga
tractuosa DSM 4126]
Length = 225
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 69/134 (51%), Gaps = 12/134 (8%)
Query: 97 KSCDKGAR---SPI-GIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVL 152
K +KG SP+ I+ I+ + V I R + + LS L ++S A ++G LG V
Sbjct: 95 KMLEKGVSRIGSPLKNIEVSIENVGKVEIYR----LEKNLSLLATISGAAPMIGFLGTVT 150
Query: 153 GMMGFFQSIA---GYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQ 209
GM+ F +IA G S ++S GI E++I+ +GL V I + + YN + +K +
Sbjct: 151 GMIQAFIAIAQEEGSVSPKLLS-EGIYEAMITTAVGLSVGIIAYLGYNYLVTQVQKVIHK 209
Query: 210 MEGFANEFSAILSR 223
ME + EF +L
Sbjct: 210 MEYTSVEFIDLLQE 223
>gi|307545630|ref|YP_003898109.1| MotA/TolQ/ExbB proton channel [Halomonas elongata DSM 2581]
gi|307217654|emb|CBV42924.1| MotA/TolQ/ExbB proton channel [Halomonas elongata DSM 2581]
Length = 462
Score = 48.1 bits (113), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 81/178 (45%), Gaps = 30/178 (16%)
Query: 50 ITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGI 109
+TL+RQ + EQL + + LK H +G +P +
Sbjct: 294 VTLKRQLGDLEQLREDN----PLGRVLKRFHALG------------------SGHAPEAL 331
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
+ R+D M +A E + S + +++ L+G+LG V GM+ FQSI + + +
Sbjct: 332 EARLDEAM---LA-EQPRLERGQSLVKMLAAVAPLLGLLGTVTGMIVTFQSITVFGTGDP 387
Query: 170 -VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+ GI ++L++ +LGL ++P A+ S+ MEG A SA+L+ + E
Sbjct: 388 QLMAGGISQALVTTVLGLITAVPLLFAHTALSSRSRALIGTMEGRA---SAVLADRLE 442
>gi|297620361|ref|YP_003708498.1| putative protein TolQ [Waddlia chondrophila WSU 86-1044]
gi|297375662|gb|ADI37492.1| putative protein TolQ [Waddlia chondrophila WSU 86-1044]
Length = 249
Score = 48.1 bits (113), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 62/115 (53%), Gaps = 5/115 (4%)
Query: 105 SPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFF---QSI 161
SP I D I+ + AIA + +E+ L L ++ L+G+LG V G++ F QS
Sbjct: 121 SPTDI-DCIEANLATAIASQTKEMDRHLFILSTIVGLAPLMGLLGTVWGILISFSQLQSQ 179
Query: 162 AGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANE 216
A SN +V + GI +L + +LGL +IP+ IAYN + F MEGF NE
Sbjct: 180 AAAASNQMV-LGGIALALTTTVLGLLTAIPALIAYNYLKSSIRDFETDMEGFTNE 233
>gi|237737526|ref|ZP_04568007.1| biopolymer transport exbB protein [Fusobacterium mortiferum ATCC
9817]
gi|229419406|gb|EEO34453.1| biopolymer transport exbB protein [Fusobacterium mortiferum ATCC
9817]
Length = 204
Score = 48.1 bits (113), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
Query: 114 DRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP 173
D+++ E+ + +L LG + + +VG+LG V GM+ F+++A + + + +
Sbjct: 92 DQLLKEIAFDEISSLERRLHLLGLIGNMATMVGLLGTVTGMIKAFKNLATFGAGDPTIVA 151
Query: 174 -GIIESLISILLGLCVSIPSSIAYNKF 199
GI E+LI+ GL ++IP+ AYN F
Sbjct: 152 GGISEALITTASGLIIAIPTIFAYNIF 178
>gi|262195254|ref|YP_003266463.1| MotA/TolQ/ExbB proton channel [Haliangium ochraceum DSM 14365]
gi|262078601|gb|ACY14570.1| MotA/TolQ/ExbB proton channel [Haliangium ochraceum DSM 14365]
Length = 247
Score = 48.1 bits (113), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 92/202 (45%), Gaps = 30/202 (14%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFR----EFEQLFWSGQ 67
+I +LF+Q G ++ LLF S S +V I++ V F + R E + SG
Sbjct: 6 TIKSLFVQSG--AGWVLWLLFALSAGSVAVFIERLVYFRSKSEDVRALAAELDAHLASG- 62
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGAR-SPIGIQDRIDRMMDVAIARELE 126
+ + +L+ ++G A G R +P G + D+ M AIA E +
Sbjct: 63 AYQAALDALRPLRSVGAAV------------ARAGLRLAPRG-SEAADKGMQSAIAVERK 109
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN---------VVSIPGIIE 177
+ +L++LG++ + +G+ G V+G++ F+ + + I E
Sbjct: 110 GLDARLTYLGTLGNNAPFIGLFGTVIGVILAFEELGQVTGATGAAASQVASAAVMSAIAE 169
Query: 178 SLISILLGLCVSIPSSIAYNKF 199
+L++ +G+ V++P+ AYN F
Sbjct: 170 ALVATAVGIGVALPAVAAYNFF 191
>gi|332662327|ref|YP_004445115.1| MotA/TolQ/ExbB proton channel [Haliscomenobacter hydrossis DSM
1100]
gi|332331141|gb|AEE48242.1| MotA/TolQ/ExbB proton channel [Haliscomenobacter hydrossis DSM
1100]
Length = 278
Score = 48.1 bits (113), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 62/116 (53%), Gaps = 12/116 (10%)
Query: 111 DRIDRMMDV-AIARELEEIT--------EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI 161
+ +DR V AI +E+EE T L L ++SS L+G+LG V+GM+ F ++
Sbjct: 153 EALDREQKVLAITKEIEEATSLEMPMLERNLVILATISSIATLLGLLGTVIGMIKAFSAL 212
Query: 162 AGYYSNNVVSI-PGIIESLISILLGLCVSIPSSIAYNKFIE--DSKKFAMQMEGFA 214
A + + V++ GI E+LI+ LG+ S + I YN F D +A+ GF+
Sbjct: 213 ATAGAPDAVALSSGISEALINTALGIGTSAFAIIFYNFFTTRIDGMTYAIDEAGFS 268
>gi|42522085|ref|NP_967465.1| tolQ protein [Bdellovibrio bacteriovorus HD100]
gi|39574616|emb|CAE78458.1| tolQ protein [Bdellovibrio bacteriovorus HD100]
Length = 209
Score = 48.1 bits (113), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 90/192 (46%), Gaps = 23/192 (11%)
Query: 16 LFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRR------QFREFEQLFWSGQSL 69
+F LA + ++ +L + S+LS +I+++ + L++ + R +L SL
Sbjct: 6 IFTIAHLADQVVLWILLVLSVLSIGMILER---YFALKKISAESQRVRARIKLALQSNSL 62
Query: 70 ETVCKSLKNHHNI-GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
E V K+ ++I G AA + A+ + + KG + + + E E+
Sbjct: 63 EDVEDLAKDPNSIEGRAAGY--ALKHMRDAGSKG----------LSEIFNTFALTERPEL 110
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA-GYYSNNVVSIPGIIESLISILLGLC 187
+ L FL ++ S +G+ G VLG+M F +A + + GI +L++ GL
Sbjct: 111 EKFLGFLATVGSNAPYIGLFGTVLGIMKAFNDLATAPEAGQQTVMAGISMALVATAAGLF 170
Query: 188 VSIPSSIAYNKF 199
V+IP+ AYN +
Sbjct: 171 VAIPAVAAYNYY 182
>gi|197124531|ref|YP_002136482.1| MotA/TolQ/ExbB proton channel [Anaeromyxobacter sp. K]
gi|220919256|ref|YP_002494560.1| MotA/TolQ/ExbB proton channel [Anaeromyxobacter dehalogenans 2CP-1]
gi|196174380|gb|ACG75353.1| MotA/TolQ/ExbB proton channel [Anaeromyxobacter sp. K]
gi|219957110|gb|ACL67494.1| MotA/TolQ/ExbB proton channel [Anaeromyxobacter dehalogenans 2CP-1]
Length = 233
Score = 48.1 bits (113), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 65/138 (47%), Gaps = 9/138 (6%)
Query: 85 AAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLS----FLGSMSS 140
A +F++ + G R+P ++I A+ RE +++ KL LG++ +
Sbjct: 75 ADVFLAGLVAVAPRPGPGGRAPAPTAEKIA----AAVERERQQVNLKLRRNLWILGTVGA 130
Query: 141 AGLLVGILGAVLGMMGFFQSIAGYYSNN-VVSIPGIIESLISILLGLCVSIPSSIAYNKF 199
VG+ G V+G+M F+ +A V GI E+L++ G+ V+I + + +N
Sbjct: 131 TAPFVGLFGTVVGIMHAFRQMAATGQGGFTVVAAGISEALVTTAGGIAVAIEAVVIFNFL 190
Query: 200 IEDSKKFAMQMEGFANEF 217
+K A+Q+ E+
Sbjct: 191 NVHVQKLALQLRLLTEEY 208
>gi|327403103|ref|YP_004343941.1| outer membrane transport energization protein ExbB [Fluviicola
taffensis DSM 16823]
gi|327318611|gb|AEA43103.1| outer membrane transport energization protein ExbB [Fluviicola
taffensis DSM 16823]
Length = 266
Score = 48.1 bits (113), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 52/97 (53%), Gaps = 2/97 (2%)
Query: 120 AIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESL 179
AI+ EL +++ L + + S G L+G++G VLGM+ FQ++ + GI E+L
Sbjct: 161 AISLELPMMSKNLVVISTCVSVGTLIGLIGTVLGMIKSFQAMGEGTPDTTKLSVGISEAL 220
Query: 180 ISILLGLCVSIPSSIAYNKFIE--DSKKFAMQMEGFA 214
I+ LG+ S +++ YN F D AM GFA
Sbjct: 221 INTFLGIFASTLATVMYNFFNTKIDQMTHAMDEAGFA 257
>gi|260061802|ref|YP_003194882.1| putative biopolymer transport protein [Robiginitalea biformata
HTCC2501]
gi|88785935|gb|EAR17104.1| putative biopolymer transport protein [Robiginitalea biformata
HTCC2501]
Length = 228
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 59/115 (51%), Gaps = 2/115 (1%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA--GYYSNN 168
D I+ ++ A E+ ++ + +S L +++ A ++G LG V+GM+ F +A G +
Sbjct: 112 DDINTAIENAGTLEVYKLEKNVSVLATVAGAAPMIGFLGTVIGMILAFHQMATSGGQAEM 171
Query: 169 VVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
GI ++ + + GL V I + + YN + + K +ME A EF +LS
Sbjct: 172 GALASGIYTAMTTTVAGLVVGIIAYVGYNHLVNRTDKVVHKMEANAVEFLDLLSE 226
>gi|85711177|ref|ZP_01042237.1| TonB system biopolymer transport component [Idiomarina baltica
OS145]
gi|85695090|gb|EAQ33028.1| TonB system biopolymer transport component [Idiomarina baltica
OS145]
Length = 458
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Query: 121 IARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESL 179
I RE+ +IT L+F+ +S L+G+LG V GM+ FQ+I + + + + GI ++L
Sbjct: 352 ILREVPKITRNLTFIKIISVVAPLMGLLGTVTGMINTFQAITLFGTGDPKMMAGGISQAL 411
Query: 180 ISILLGLCVSIPSSIAY 196
++ +LGL V+IP ++ +
Sbjct: 412 VTTVLGLVVAIPMTLLF 428
>gi|237756443|ref|ZP_04584981.1| MotA/TolQ/ExbB proton channel [Sulfurihydrogenibium yellowstonense
SS-5]
gi|237691391|gb|EEP60461.1| MotA/TolQ/ExbB proton channel [Sulfurihydrogenibium yellowstonense
SS-5]
Length = 147
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCV 188
++L L + + +G+ G VLG++ F S++ V V + GI E+L++ +GL V
Sbjct: 61 KRLGILATFGNNAPFIGLFGTVLGIIKAFHSLSTSTEFGVRVVMAGISEALVATAMGLFV 120
Query: 189 SIPSSIAYNKFIEDSKKFAMQME 211
+IP+ IAYN F+ +K M E
Sbjct: 121 AIPAVIAYNYFVRKAKFLMMVYE 143
>gi|114331497|ref|YP_747719.1| MotA/TolQ/ExbB proton channel [Nitrosomonas eutropha C91]
gi|114308511|gb|ABI59754.1| MotA/TolQ/ExbB proton channel [Nitrosomonas eutropha C91]
Length = 202
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 85/174 (48%), Gaps = 19/174 (10%)
Query: 39 WSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKS 98
WS+ + K L R +E+ + SG +T+ L++H +G + ++ + K+
Sbjct: 31 WSLRLSKVSPRDLLPRVLQEYRR---SGVHADTLTH-LQSHSPLG--QVLVAGL----KN 80
Query: 99 CDKGARSPIGI-QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGF 157
D SP I +D I+ VA A ELE L+ LG+++S L+G+ G ++GM+
Sbjct: 81 ID----SPREIMKDSIEEAGRVA-AHELER---YLTTLGTIASLSPLMGLFGTLIGMIEI 132
Query: 158 FQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
F S SN V GI +L + G+ V+IPS I Y F + ++ME
Sbjct: 133 FGSGTPSGSNPVQLAHGISVALYNSAFGILVAIPSIIFYRHFRAKVDELVLEME 186
>gi|88705098|ref|ZP_01102810.1| MotA/TolQ/ExbB proton channel family protein [Congregibacter
litoralis KT71]
gi|88700793|gb|EAQ97900.1| MotA/TolQ/ExbB proton channel family protein [Congregibacter
litoralis KT71]
Length = 207
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 52/91 (57%), Gaps = 1/91 (1%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
+D + ++ A + ++ L+ LG++++ L+G+LG V+GM+ F I + N
Sbjct: 85 RDVMKESIEEAAGHVVHDLERYLNTLGTIAAIAPLLGLLGTVVGMIRVFAEIMSQGTGNA 144
Query: 170 VSIP-GIIESLISILLGLCVSIPSSIAYNKF 199
++ GI E+LI+ GLCV+IP+ + + F
Sbjct: 145 SALAGGISEALITTAAGLCVAIPALVMHRYF 175
>gi|255020854|ref|ZP_05292910.1| MotA/TolQ/ExbB proton channel [Acidithiobacillus caldus ATCC 51756]
gi|209574024|gb|ACI62950.1| TonB system transport protein ExbB2 [Acidithiobacillus caldus]
gi|254969645|gb|EET27151.1| MotA/TolQ/ExbB proton channel [Acidithiobacillus caldus ATCC 51756]
Length = 225
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 77/164 (46%), Gaps = 5/164 (3%)
Query: 55 QFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQD--R 112
+F ++ G+ + T S + LA I ++ ++ + R P I+D R
Sbjct: 34 RFLFINRMVHQGEQIATALDSAADLKPSTLAPIAEASPYPFRALLEVPLRFP-QIRDSAR 92
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI 172
+ ++ + R++ + ++L L + + L+G+LG ++GM FQ + G +NN +I
Sbjct: 93 LSEILQEVVMRQVPSLDKRLWILDTAVTLAPLLGLLGTIVGMFHAFQ-VLGDAANNPTAI 151
Query: 173 PG-IIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFAN 215
G + E+L++ GL ++I + +N + QME N
Sbjct: 152 TGNVAEALLATAAGLVIAIIGLVTFNGLHNRMRLVVHQMETLRN 195
>gi|212690749|ref|ZP_03298877.1| hypothetical protein BACDOR_00236 [Bacteroides dorei DSM 17855]
gi|237708134|ref|ZP_04538615.1| MotA/TolQ/ExbB proton channel [Bacteroides sp. 9_1_42FAA]
gi|237723670|ref|ZP_04554151.1| MotA/TolQ/ExbB proton channel [Bacteroides sp. D4]
gi|265756790|ref|ZP_06090778.1| MotA/TolQ/ExbB proton channel [Bacteroides sp. 3_1_33FAA]
gi|212666626|gb|EEB27198.1| hypothetical protein BACDOR_00236 [Bacteroides dorei DSM 17855]
gi|229437881|gb|EEO47958.1| MotA/TolQ/ExbB proton channel [Bacteroides dorei 5_1_36/D4]
gi|229457687|gb|EEO63408.1| MotA/TolQ/ExbB proton channel [Bacteroides sp. 9_1_42FAA]
gi|263233576|gb|EEZ19196.1| MotA/TolQ/ExbB proton channel [Bacteroides sp. 3_1_33FAA]
Length = 271
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 60/105 (57%), Gaps = 3/105 (2%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI-AGYYSNNVVS 171
I + ++ A A EL + + L +G++++ G L+G+LG V+GM+ F ++ AG ++++
Sbjct: 157 IQKELEEATALELPMMEQNLPIIGTITTLGTLMGLLGTVIGMIRSFAALSAGGGTDSMAL 216
Query: 172 IPGIIESLISILLGLCVSIPSSIAYNKFIE--DSKKFAMQMEGFA 214
GI E+LI+ G+ + IAYN + D +++ GF+
Sbjct: 217 SQGISEALINTAFGILTGALAVIAYNYYTNKIDKLTYSLDEVGFS 261
>gi|92113740|ref|YP_573668.1| MotA/TolQ/ExbB proton channel [Chromohalobacter salexigens DSM
3043]
gi|91796830|gb|ABE58969.1| outer membrane transport energization protein ExbB
[Chromohalobacter salexigens DSM 3043]
Length = 469
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 95/213 (44%), Gaps = 37/213 (17%)
Query: 19 QMGLAVKCIITLLFIFSILSWSVIIQKSVNF----ITLRRQFREFEQLFWSGQSLETVCK 74
Q G AV +I +L I +L V + + V + LRRQ R +
Sbjct: 274 QQGGAVGYVIVVLGIAGLL---VALSQYVYLLLVSVRLRRQLRSPD-------------- 316
Query: 75 SLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSF 134
+L++ + +G +A+ +P ++ R+D A+ E +
Sbjct: 317 ALRDDNPLGRVLGRFAALGREH--------APEALEARLDE----ALLAEKPRLERGQPL 364
Query: 135 LGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSS 193
+ M++ L+G+LG V GM+G FQSI + + + + GI ++L++ +LGL ++P
Sbjct: 365 VKLMAAVAPLLGLLGTVTGMIGTFQSITVFGTGDPQLMAGGISQALVTTVLGLIAAVPLL 424
Query: 194 IAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
A+ S++ +EG A SA+L+ E
Sbjct: 425 FAHTALSSRSRELLGTLEGRA---SAVLAEHLE 454
>gi|260494268|ref|ZP_05814399.1| tonB-system energizer ExbB [Fusobacterium sp. 3_1_33]
gi|260198414|gb|EEW95930.1| tonB-system energizer ExbB [Fusobacterium sp. 3_1_33]
Length = 202
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 69/142 (48%), Gaps = 10/142 (7%)
Query: 91 AMSEWKKSCDKGA------RSPIGI--QDRIDRMMDVAIARELEEITEKLSFLGSMSSAG 142
A+ + K+SC A ++P GI QD + ++ I +E +L+ L S+ S
Sbjct: 62 ALCDTKESCVASAVKKFLQKAPRGIDVQDYEFILKEITI-KETSPYESRLNLLASVISIS 120
Query: 143 LLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISILLGLCVSIPSSIAYNKFIE 201
++G+LG V GM+ F +I+ Y + + + GI E+L++ GL ++IP + YN
Sbjct: 121 PMLGLLGTVTGMIRAFTNISKYGTGDAAIVADGIAEALLTTAAGLMIAIPVIVVYNYLNR 180
Query: 202 DSKKFAMQMEGFANEFSAILSR 223
+K +++ I R
Sbjct: 181 RLEKMENEIDDVVTNIINIFRR 202
>gi|253584054|ref|ZP_04861252.1| ligand gated channel protein TolQ [Fusobacterium varium ATCC 27725]
gi|251834626|gb|EES63189.1| ligand gated channel protein TolQ [Fusobacterium varium ATCC 27725]
Length = 206
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 84/175 (48%), Gaps = 15/175 (8%)
Query: 30 LLFIFSILSWSVIIQKSVNFI----TLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLA 85
+LFI S++S +VII++ F T+ R FR+ + S + + + + N
Sbjct: 14 VLFILSLISTTVIIERLFFFFKKEKTMNRNFRKEVIMAVSNRDMCRIIEICDKERN---- 69
Query: 86 AIFMSAMSEWKKSCDKGARSPIGIQD--RIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
S KK + ++D + D+++ E+ + ++L LG ++
Sbjct: 70 ----SVGCTVKKFLCRCNICDTNLKDFHQFDQIIKEIEMDEISPLEKRLHILGIIAHVAP 125
Query: 144 LVGILGAVLGMMGFFQSIAGYYSNN-VVSIPGIIESLISILLGLCVSIPSSIAYN 197
++G+LG V GM+ F+ +A + + + + I ++LI+ GL ++IP+ + YN
Sbjct: 126 MLGLLGTVTGMIDAFKDLAKFGAGDPTIVADSISKALITTAAGLSIAIPALVVYN 180
>gi|315186359|gb|EFU20119.1| MotA/TolQ/ExbB proton channel [Spirochaeta thermophila DSM 6578]
Length = 208
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 62/122 (50%), Gaps = 14/122 (11%)
Query: 107 IGIQDR-----IDR-MMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQS 160
+GI+ R I R ++ A +E+ + + LS LG+++ L+G+LG V G M F
Sbjct: 76 VGIEHRDHPEHIQREVIKDAANQEVPRLEKNLSGLGTIAHIAPLLGLLGTVTGTMKTFGV 135
Query: 161 IAGYYSNNVVSIPGII-----ESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFAN 215
+ + V+ PGI+ E+LI+ + G+ V++P+ I YN + ++ME N
Sbjct: 136 LGQF---GAVTDPGILATGISEALITTVAGILVAVPAVIFYNYLVTKVNLLLIKMENQVN 192
Query: 216 EF 217
Sbjct: 193 SL 194
>gi|309389286|gb|ADO77166.1| outer membrane transport energization protein ExbB [Halanaerobium
praevalens DSM 2228]
Length = 216
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 89/190 (46%), Gaps = 22/190 (11%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFI----TLRRQFREFEQLFWSGQSLETVCKSLKNHHNIG 83
I LLF S+ S +VII+K++ F + R + E L G L + LK G
Sbjct: 18 IPLLFA-SVFSLAVIIEKAIFFYRHNDSNSRLIKRIEILVEEGDIL-SALNELKG--KTG 73
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
A +SA + + P R+ ++ E++++ L L ++
Sbjct: 74 TNAKLLSA------ALAHNSEDP----SRLREVLKAVGEDEIKKMERHLPILDVVAMISP 123
Query: 144 LVGILGAVLGMMGFFQ---SIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFI 200
L+G+LG V+G++ F + AG + +S GI +LIS LGL ++IP++I Y+ F
Sbjct: 124 LLGLLGTVIGIISSFNILGTAAGAANPAQIS-SGIAAALISTALGLIIAIPTAIFYSYFA 182
Query: 201 EDSKKFAMQM 210
+K A QM
Sbjct: 183 HKVEKRAHQM 192
>gi|254784601|ref|YP_003072029.1| transporter proton channel domain containing protein
[Teredinibacter turnerae T7901]
gi|237684010|gb|ACR11274.1| transporter, proton channel domain containing protein
[Teredinibacter turnerae T7901]
Length = 458
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 117 MDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII 176
++ A +EL I L+ L +S L+G+LG V GM+ FQ+I Y + + ++ G I
Sbjct: 349 LEEATLKELPRIESGLNLLKIISMVAPLLGLLGTVTGMIVTFQAITIYGAGDPKAMAGGI 408
Query: 177 E-SLISILLGLCVSIPS 192
+L++ +LGLCV+IP+
Sbjct: 409 SGALVTTVLGLCVAIPT 425
>gi|225154950|ref|ZP_03723447.1| MotA/TolQ/ExbB proton channel [Opitutaceae bacterium TAV2]
gi|224804309|gb|EEG22535.1| MotA/TolQ/ExbB proton channel [Opitutaceae bacterium TAV2]
Length = 622
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 54/112 (48%), Gaps = 1/112 (0%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI 172
I +D + E + + L +L + G VG+LG V+G+M F IA V SI
Sbjct: 492 IKASLDSGLTHETDRLNRGLVYLTISIAGGPYVGLLGTVVGVMITFAVIAKTGEVEVNSI 551
Query: 173 -PGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
PGI +L++ + GL V+IP+ Y+ K M F +EF A ++
Sbjct: 552 APGIASALLATVAGLLVAIPALFIYSYLNTRIKSLTSSMRTFIDEFIAKMAE 603
>gi|113866635|ref|YP_725124.1| biopolymer transport channel protein [Ralstonia eutropha H16]
gi|113525411|emb|CAJ91756.1| biopolymer transport channel protein [Ralstonia eutropha H16]
Length = 239
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 106/229 (46%), Gaps = 28/229 (12%)
Query: 6 LAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQ-------FRE 58
L+I + +F++ G I L + S+++ ++I+++ F+TL+R + E
Sbjct: 27 LSIPGVQLFSIIQAAGWP----IWPLLLASVIALALIVER---FLTLKRSRVLPARLYEE 79
Query: 59 FEQLFWSGQSLETVCKSLKNHHNIG--LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRM 116
++ V +L+ + +G LAA + + S D +D ++
Sbjct: 80 ALAAAQQRRATPEVVNTLEQNSPLGRVLAAGLRHVVLQPHTSRDAA-------KDVVEEA 132
Query: 117 MDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII 176
V +A ELE L+ LG+++S L+G+LG V+GM+ F S G ++ GI
Sbjct: 133 GRV-VAHELERY---LNALGTIASVAPLMGLLGTVIGMIEIFGSQGGTGASPEQLAHGIS 188
Query: 177 ESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEF-SAILSRQ 224
+L + GL V+IP+ I + F + ++E A F AIL ++
Sbjct: 189 VALYNTAFGLIVAIPALIFWRYFRRRVDDYVAELEFRATSFLDAILPQR 237
>gi|307718628|ref|YP_003874160.1| tolQ-type transport protein [Spirochaeta thermophila DSM 6192]
gi|306532353|gb|ADN01887.1| probable tolQ-type transport protein [Spirochaeta thermophila DSM
6192]
Length = 208
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 62/122 (50%), Gaps = 14/122 (11%)
Query: 107 IGIQDR-----IDR-MMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQS 160
+GI+ R I R ++ A +E+ + + LS LG+++ L+G+LG V G M F
Sbjct: 76 VGIEHRDHPEHIQREVIKDAANQEVPRLEKNLSGLGTIAHIAPLLGLLGTVTGTMKTFGV 135
Query: 161 IAGYYSNNVVSIPGII-----ESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFAN 215
+ + V+ PGI+ E+LI+ + G+ V++P+ I YN + ++ME N
Sbjct: 136 LGQF---GAVTDPGILATGISEALITTVAGILVAVPAVIFYNYLVTKVNLLLIKMENQVN 192
Query: 216 EF 217
Sbjct: 193 SL 194
>gi|331000080|ref|ZP_08323775.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Parasutterella excrementihominis YIT 11859]
gi|329572964|gb|EGG54584.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Parasutterella excrementihominis YIT 11859]
Length = 213
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 100/225 (44%), Gaps = 47/225 (20%)
Query: 5 GLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFW 64
G+A++ I IFAL++ + L++ +LS + ++ +T R R F +
Sbjct: 14 GIALVVIGIFALYIT-------VWNFLYLRGVLSKFKQHFRGMDKVTPERIRRYFGE--- 63
Query: 65 SGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARE 124
S LE + + + H GA S D I + +
Sbjct: 64 STNPLECIVRDIVMTH---------------------GAHS-----DDIRAEVAYLFHKH 97
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-----GIIESL 179
+ + L++L +S+ L+G+LG V+GM+ F++I S NV P GI +L
Sbjct: 98 FKPVNNALTWLKLISAVSPLLGLLGTVIGMVTVFRTI----SENVSPDPTMLAGGIWTAL 153
Query: 180 ISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
I+ ++GL V+IP+ +AY + K+ +++E + A+ R+
Sbjct: 154 ITTVMGLVVAIPALMAYYYLMLKVKE--LRIEAVEYSYRALNIRR 196
>gi|255534208|ref|YP_003094579.1| MotA/TolQ/ExbB family biopolymer transport prote in
[Flavobacteriaceae bacterium 3519-10]
gi|255340404|gb|ACU06517.1| MotA/TolQ/ExbB family biopolymer transport prote in
[Flavobacteriaceae bacterium 3519-10]
Length = 226
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 58/103 (56%), Gaps = 4/103 (3%)
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGM-MGFFQ--SIAGYYSNNVVSIPGIIESLI 180
E+ ++ + L+ L S S A ++G LG V+GM M FF+ ++ G S +++ GI ++
Sbjct: 123 EVSKLEKNLNILASASGAAPMLGFLGTVVGMIMAFFEISNVTGAVSPKLLA-SGIYTAMA 181
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
+ +GL V IP+ YN + + + ++++ N+F L++
Sbjct: 182 TTAVGLFVGIPAYFFYNILVTNVDRLVLKIQTHVNDFLDALNK 224
>gi|182679109|ref|YP_001833255.1| MotA/TolQ/ExbB proton channel [Beijerinckia indica subsp. indica
ATCC 9039]
gi|182634992|gb|ACB95766.1| MotA/TolQ/ExbB proton channel [Beijerinckia indica subsp. indica
ATCC 9039]
Length = 211
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 81/192 (42%), Gaps = 19/192 (9%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
+ IS +LF Q G K ++ +L + S+ W +II+ V+ L++ R L SG
Sbjct: 4 LSISPLSLFEQAGPVGKAVMAILLLASVWCWVLIIEALVSVSRLKKAVR----LARSGGI 59
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
V L I ++ E + RI M A +++
Sbjct: 60 HPLVAPLLDAGQKAAATTIPGESVGE--------------ARIRIAEAMHRAAQTIMKKT 105
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
L L +SS VG+ G V G+M F IA ++ V PGI E+L + GL
Sbjct: 106 EGGLPNLAVISSVAPFVGLFGTVWGIMTSFTGIAASKDTSLAVVAPGIAEALAATAYGLA 165
Query: 188 VSIPSSIAYNKF 199
+IP+++ YN+
Sbjct: 166 AAIPATLGYNRI 177
>gi|134095666|ref|YP_001100741.1| putative biopolymer transport exbB-like protein [Herminiimonas
arsenicoxydans]
gi|133739569|emb|CAL62620.1| putative biopolymer transport protein ExbB-like [Herminiimonas
arsenicoxydans]
Length = 203
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 92/199 (46%), Gaps = 25/199 (12%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQ-------FREFEQLFWSGQSLETVCKSLKNHH 80
I LL I S+++ ++II++S + LRR+ E +++ +G+ V +L+ +
Sbjct: 12 IWLLLIASVIALTLIIERS---LYLRRRRILPPSLLEEVVRVYHNGKIDANVVATLEKNS 68
Query: 81 NIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSS 140
+G + G R+ +D + ++ A E+ L+ LG++++
Sbjct: 69 PLG-------------RVLAAGLRNVNAPRDVMKESIEEAGRGTAHELERFLTTLGTIAT 115
Query: 141 AGLLVGILGAVLGMMGFF--QSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNK 198
L+G+ G V+GM+ F Q+ G +N GI +L + GL +++PS + Y
Sbjct: 116 LAPLMGLFGTVVGMIEIFGSQNATGTGANPTQLAHGISIALYNTGFGLAIAMPSLVFYRH 175
Query: 199 FIEDSKKFAMQMEGFANEF 217
F F + ME A +F
Sbjct: 176 FRALVDSFIIDMEQQAVKF 194
>gi|124002252|ref|ZP_01687106.1| MotA/TolQ/ExbB proton channel family protein [Microscilla marina
ATCC 23134]
gi|123992718|gb|EAY32063.1| MotA/TolQ/ExbB proton channel family protein [Microscilla marina
ATCC 23134]
Length = 216
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 57/104 (54%), Gaps = 3/104 (2%)
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA--GYYSNNVVSIPGIIESLIS 181
EL + + L+ L +++ A +VG LG V+GM+G F I+ S V+S GI +L++
Sbjct: 114 ELYRLEKNLAMLATIAGAAPMVGFLGTVVGMIGAFIRISQQSTVSPQVLS-QGIYTALLT 172
Query: 182 ILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
GL V I ++++YN + +K QME + +F +L +
Sbjct: 173 TAGGLIVGILANVSYNYLMTKVQKVIHQMEYVSMDFMDLLQEPS 216
>gi|308275257|emb|CBX31854.1| Biopolymer transport protein exbB [uncultured Desulfobacterium sp.]
Length = 144
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 55/100 (55%), Gaps = 4/100 (4%)
Query: 115 RMMDVAIARELE-EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA--GYYSNNVVS 171
R+ D + LE EIT+K+ + ++ S +G+LG VLG+M F ++ G+ +
Sbjct: 38 RIEDFPDKKTLELEITKKIHLIATIGSNAPYIGLLGTVLGVMLTFYTMGKEGFMDTGKIM 97
Query: 172 IPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
+ G+ +L + +GL V+IPS + YN + +K MQ E
Sbjct: 98 V-GLSLALKATAVGLLVAIPSIVLYNFLLRKAKVLMMQWE 136
>gi|257469999|ref|ZP_05634091.1| biopolymer transport exbB protein [Fusobacterium ulcerans ATCC
49185]
gi|317064225|ref|ZP_07928710.1| ligand gated channel protein TolQ [Fusobacterium ulcerans ATCC
49185]
gi|313689901|gb|EFS26736.1| ligand gated channel protein TolQ [Fusobacterium ulcerans ATCC
49185]
Length = 206
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 84/175 (48%), Gaps = 15/175 (8%)
Query: 30 LLFIFSILSWSVIIQKSVNFI----TLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLA 85
+LFI S++S +VII++ F T+ R FR+ L S + + + + N
Sbjct: 14 ILFILSLISTTVIIERLFFFFKKEKTMNRNFRKEVILAVSNRDMCRIIEICDKERN---- 69
Query: 86 AIFMSAMSEWKKSCDKGARSPIGIQD--RIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
S KK + ++D + D+++ E+ + ++L LG ++
Sbjct: 70 ----SVGCTVKKFLCRCNICDTNLKDFHQFDQIIKEIEMDEISPLEKRLHILGIIAHVAP 125
Query: 144 LVGILGAVLGMMGFFQSIAGYYSNN-VVSIPGIIESLISILLGLCVSIPSSIAYN 197
++G+LG V GM+ F+ ++ + + + + I ++LI+ GL ++IP+ + YN
Sbjct: 126 MLGLLGTVTGMIDAFKDLSKFGAGDPTIVADSISKALITTAAGLSIAIPALVVYN 180
>gi|258592654|emb|CBE68963.1| MotA/TolQ/ExbB proton channel [NC10 bacterium 'Dutch sediment']
Length = 200
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 68/143 (47%), Gaps = 12/143 (8%)
Query: 87 IFMSAMSEWKKSCDKG--ARSPI------GIQDR---IDRMMDVAIARELEEITEKLSFL 135
+ +++ W+ + G +RSP+ GI+ R M+ A EL + L L
Sbjct: 49 LMLASAGNWEDAHKFGELSRSPVARVLAAGIRHRNPAPTLAMEAAAHEELTHMRRYLPLL 108
Query: 136 GSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISILLGLCVSIPSSI 194
++ + L+G+LG V GM+G F +A N +I G+ E+LI+ GL ++I + +
Sbjct: 109 DTVITLSPLLGLLGTVTGMIGSFGVMASGGINQPHAITGGVAEALIATATGLGIAIATLV 168
Query: 195 AYNKFIEDSKKFAMQMEGFANEF 217
YN F ++ +E + +
Sbjct: 169 PYNYFTTRVERIMGDIERYGSRL 191
>gi|167740202|ref|ZP_02412976.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Burkholderia pseudomallei 14]
gi|167817417|ref|ZP_02449097.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Burkholderia pseudomallei 91]
Length = 140
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 57/119 (47%), Gaps = 7/119 (5%)
Query: 106 PIGIQDRIDRMMDV--AIARELEEITEKLSF----LGSMSSAGLLVGILGAVLGMMGFFQ 159
P + R++R V A+ L +L F L S+ S VG+LG V G+
Sbjct: 2 PHALAARVERGERVLRALRHALRASQRRLEFGQVLLASIGSTAPFVGLLGTVWGIYHALG 61
Query: 160 SIAGYYSNNVVSIPGII-ESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEF 217
SIA + ++ G + E+LI GL V+IP+ +AYN ++ +++GFA +
Sbjct: 62 SIAASGQAQIENVAGPVGEALIMTAFGLVVAIPAVLAYNILGRLVRQLVEELDGFARDL 120
>gi|152981742|ref|YP_001354271.1| biopolymer transport protein ExbB [Janthinobacterium sp. Marseille]
gi|151281819|gb|ABR90229.1| biopolymer transport protein ExbB [Janthinobacterium sp. Marseille]
Length = 203
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 94/203 (46%), Gaps = 25/203 (12%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQ-------FREFEQLFWSGQSLETVCKSLKNHH 80
I LL I S+++ ++II++S + LRR+ E +++ SG+ + V +L+ +
Sbjct: 12 IWLLLIASVIALTLIIERS---MYLRRRRILPPSLLEEVVRVYRSGRIDDNVVNTLEQNS 68
Query: 81 NIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSS 140
+G + G R+ +D + ++ A + L+ LG++++
Sbjct: 69 PLG-------------RVLAAGLRNVDAPRDVMKESIEEAGRGTAHTLERFLTTLGTIAT 115
Query: 141 AGLLVGILGAVLGMMGFF--QSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNK 198
L+G+ G V+GM+ F Q+ G +N GI +L + GL +++PS + Y
Sbjct: 116 LAPLMGLFGTVVGMIEIFGSQNATGTGANPAQLAHGISIALYNTGFGLAIAMPSLVFYRH 175
Query: 199 FIEDSKKFAMQMEGFANEFSAIL 221
F F + ME A +F I+
Sbjct: 176 FRALVDSFIIDMEQQAVKFVDIV 198
>gi|224367130|ref|YP_002601293.1| TolQ2 [Desulfobacterium autotrophicum HRM2]
gi|223689846|gb|ACN13129.1| TolQ2 [Desulfobacterium autotrophicum HRM2]
Length = 192
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 84/179 (46%), Gaps = 19/179 (10%)
Query: 31 LFIFSILSWSVIIQKSVNFITLRRQ--FREFEQLFWSGQSLETVCKSLKNHHNIGLAAIF 88
L SI+ W++II + + F L R+ RE F L V H G ++
Sbjct: 15 LVAVSIIMWTLIINRILFFHRLHRKNMSREMAGEFVKNNELPPV------HLYRGAVSLL 68
Query: 89 MSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGIL 148
++ ++ + + A + I D + +MD+ E L+ +G +++ L+G+L
Sbjct: 69 VT---QFLNNRTRKASVDLYILD--ETVMDIITVLE-----RHLALIGVLAAVAPLLGLL 118
Query: 149 GAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISILLGLCVSIPSSIAYNKFIEDSKKF 206
G V GMM F I+ + + N ++ GI E+L++ GL V+IP + ++ ++K
Sbjct: 119 GTVTGMMATFDIISTFGTGNARAMAGGISEALVTTQTGLLVAIPGLYMHGFLVKRAEKL 177
>gi|15835499|ref|NP_297258.1| MotA/TolQ/ExbB proton channel family protein [Chlamydia muridarum
Nigg]
gi|270285682|ref|ZP_06195076.1| MotA/TolQ/ExbB proton channel family protein [Chlamydia muridarum
Nigg]
gi|270289690|ref|ZP_06195992.1| MotA/TolQ/ExbB proton channel family protein [Chlamydia muridarum
Weiss]
gi|301337077|ref|ZP_07225279.1| MotA/TolQ/ExbB proton channel family protein [Chlamydia muridarum
MopnTet14]
gi|8163340|gb|AAF73612.1| MotA/TolQ/ExbB proton channel family protein [Chlamydia muridarum
Nigg]
Length = 232
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 101/216 (46%), Gaps = 30/216 (13%)
Query: 17 FMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSL 76
F + L K I LF SI +W+V+ QK +T++++F + SG+SL+ +
Sbjct: 13 FQEADLFGKVIFFSLFALSICTWTVLHQK----LTVQKKFLK------SGKSLKEFL--I 60
Query: 77 KNHH----------NIGLAAIFMSAMSEWKKSCDKG-----ARSPIGIQDRIDRMMDV-- 119
KN H + ++ + + DK R+P+ + I + +
Sbjct: 61 KNRHAPLSLDIHPESTPFTDLYFTIKRGTLELLDKNRQLAPERTPLLSVEDIQSLETLFN 120
Query: 120 AIARELEEITEKLSFLGSMS-SAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIES 178
A+ + + K +F+ + + S +G+LG V G++ F I+ +N + + G+ +
Sbjct: 121 AVMPKYRSLLNKNNFIPATTISLAPFLGLLGTVWGILLAFAHISAGQANGTIMMEGLATA 180
Query: 179 LISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFA 214
L + ++GL V+IPS + +N + + ++++E A
Sbjct: 181 LGTTIVGLFVAIPSLVGFNYLRAHASQVSLEIEQIA 216
>gi|253996019|ref|YP_003048083.1| MotA/TolQ/ExbB proton channel [Methylotenera mobilis JLW8]
gi|253982698|gb|ACT47556.1| MotA/TolQ/ExbB proton channel [Methylotenera mobilis JLW8]
Length = 201
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 90/194 (46%), Gaps = 17/194 (8%)
Query: 22 LAVKCIITLLFIFSILSWSVIIQKSV----NFITLRRQFREFEQLFWSGQSLETVCKSLK 77
LA I L I S+++ ++I ++S N ++ + E + G + L+
Sbjct: 6 LAAGWPIWPLVIASVIAVAIIGERSFALRENIVSPKNLLPELQAWLAKGGITKDTITRLE 65
Query: 78 NHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGS 137
H +G +F +A++ K S + S I++ A+A ++E+ LS LG+
Sbjct: 66 QHSMLG--RVFATALANAKNSREVTKES---IEETAR-----AVAHQMEKY---LSTLGT 112
Query: 138 MSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYN 197
+++ L+G+LG V+GM+ F + + GI +L + G+ V++P+ IAY
Sbjct: 113 IATVSPLLGLLGTVIGMVELFGAFTTQGHDVAQFARGISVALYNTAAGIVVAVPAMIAYR 172
Query: 198 KFIEDSKKFAMQME 211
F ++ME
Sbjct: 173 YFRTKVDALLIEME 186
>gi|294661092|ref|YP_003572967.1| hypothetical protein Aasi_1464 [Candidatus Amoebophilus asiaticus
5a2]
gi|227336242|gb|ACP20839.1| hypothetical protein Aasi_1464 [Candidatus Amoebophilus asiaticus
5a2]
Length = 229
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 65/118 (55%), Gaps = 8/118 (6%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+++ M++A E+ + + LS LG+++ ++G LG VLGM+ F ++A ++ +
Sbjct: 102 QNLEKSMELAGQTEIYRLEKNLSLLGAVAGIAPMLGFLGTVLGMIQAFMAMA--HTTTAI 159
Query: 171 SIP-----GIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
+ P GI E++I+ GL V I + I+Y + + ++ + ++E A++ I+
Sbjct: 160 T-PQLLAGGIYEAMITTAAGLVVGILADISYKYILTNVERVSYKIEQTASQLIEIVQE 216
>gi|260889990|ref|ZP_05901253.1| MotA/TolQ/ExbB proton channel family protein [Leptotrichia
hofstadii F0254]
gi|260860596|gb|EEX75096.1| MotA/TolQ/ExbB proton channel family protein [Leptotrichia
hofstadii F0254]
Length = 208
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 97/203 (47%), Gaps = 20/203 (9%)
Query: 30 LLFIFSILSWSVIIQKSVNFITLRRQFREFE--QLF-----WSGQSLETVCKSLKNHHNI 82
++ + SI +VII+K F++ ++ E E QL+ S + + +CK + +
Sbjct: 14 VILLASISGLAVIIEKLYTFLSKEKKLSENEKNQLYKALRTGSREEILKLCKDKTDSVSK 73
Query: 83 GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAG 142
+ I + + + D R I + ++ +I + ++ + +S LG++ +A
Sbjct: 74 SVTKIVSNTDINFDE-LDNSHRQVI------EGIISESILEQTTKLEKGMSLLGTVVNAA 126
Query: 143 LLVGILGAVLGMMGFFQSIA--GYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFI 200
+G+LG V GM+ F ++ G + +V+ GI E+L + GL V+IP+ + YN F
Sbjct: 127 PQLGLLGTVTGMIAAFSALTRNGTSTAKIVA-GGISEALYTTAFGLIVAIPALVFYNYFN 185
Query: 201 EDSKKFAMQMEGFANEFSAILSR 223
+ME A +F LSR
Sbjct: 186 RRIDVIVAEMERVALQF---LSR 205
>gi|153003268|ref|YP_001377593.1| MotA/TolQ/ExbB proton channel [Anaeromyxobacter sp. Fw109-5]
gi|152026841|gb|ABS24609.1| MotA/TolQ/ExbB proton channel [Anaeromyxobacter sp. Fw109-5]
Length = 229
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 56/106 (52%), Gaps = 5/106 (4%)
Query: 117 MDVAIARELEEITEKLS----FLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-VVS 171
+D A+ RE +++ +L LG++ + +G+ G V+G+M F+ +A V
Sbjct: 99 IDAAVERERQQMNLRLRRNVWVLGTVGAIAPFIGLFGTVVGIMQAFRHMAATGQGGFTVV 158
Query: 172 IPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEF 217
GI E+L++ G+ V+I + + YN F +K A+Q++ EF
Sbjct: 159 ASGISEALVATAGGIAVAIEAVVIYNFFNVHVQKLALQLKLMVEEF 204
>gi|332881157|ref|ZP_08448817.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Capnocytophaga sp. oral taxon 329 str. F0087]
gi|332680906|gb|EGJ53843.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Capnocytophaga sp. oral taxon 329 str. F0087]
Length = 233
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 61/115 (53%), Gaps = 2/115 (1%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGM-MGFFQ-SIAGYYSNN 168
+ I++ ++ A E+ ++ + + L +++ AG ++G LG V+GM M F + + AG +
Sbjct: 117 EDINKAIENAGTLEVYKLEKNTAILATIAGAGPMIGFLGTVVGMIMSFHEMATAGGQAEM 176
Query: 169 VVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
GI ++ + + GL V I + + YN + + K QME A EF +L+
Sbjct: 177 GALAGGIYTAMATTVAGLIVGIIAYVGYNHLVVKTDKIVHQMEANAVEFLDLLNE 231
>gi|192360816|ref|YP_001981090.1| TolR [Cellvibrio japonicus Ueda107]
gi|190686981|gb|ACE84659.1| TolR [Cellvibrio japonicus Ueda107]
Length = 458
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV- 169
D + + +D I ++L E+ + LS + M++ L+G+LG V GM+G FQ+I + + +
Sbjct: 338 DVLGKKLDEVIFKDLAELRKGLSTIKVMAAIAPLMGLLGTVTGMIGTFQAITLFGTGDPK 397
Query: 170 VSIPGIIESLISILLGLCVSIPSSIAYN 197
+ GI ++L++ + GL V+IP ++ N
Sbjct: 398 LMAGGISQALVTTVQGLVVAIPLLLSSN 425
>gi|149907622|ref|ZP_01896369.1| MotA/TolQ/ExbB proton channel family protein [Moritella sp. PE36]
gi|149809292|gb|EDM69221.1| MotA/TolQ/ExbB proton channel family protein [Moritella sp. PE36]
Length = 480
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGY-YSNNV 169
D + R +D AI EL E + L + +++ ++G+LG V GM+ FQ+I Y S+
Sbjct: 342 DELARFLDEAILAELPECRKGLGSIAVLATIAPMLGLLGTVAGMIETFQAITAYGNSDPQ 401
Query: 170 VSIPGIIESLISILLGLCVSIP 191
V GI ++L++ GL ++P
Sbjct: 402 VLSSGISKALLTTKFGLIAAVP 423
>gi|325299879|ref|YP_004259796.1| MotA/TolQ/ExbB proton channel [Bacteroides salanitronis DSM 18170]
gi|324319432|gb|ADY37323.1| MotA/TolQ/ExbB proton channel [Bacteroides salanitronis DSM 18170]
Length = 240
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 55/105 (52%), Gaps = 2/105 (1%)
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI--PGIIESLIS 181
E+ ++ L+ + ++SS ++G LG V GM+ F ++A +N +++ GI E++I+
Sbjct: 134 EVAKLENGLAIIATVSSGAPMLGFLGTVTGMVRAFWNMANAGNNIDITLLSGGIYEAMIT 193
Query: 182 ILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+ GL V I + AYN + K QME F +++ E
Sbjct: 194 TVGGLVVGIAAMFAYNHLVYRVDKVVSQMEARTMAFMDLINEPDE 238
>gi|218129044|ref|ZP_03457848.1| hypothetical protein BACEGG_00617 [Bacteroides eggerthii DSM 20697]
gi|317474828|ref|ZP_07934098.1| MotA/TolQ/ExbB proton channel family protein [Bacteroides eggerthii
1_2_48FAA]
gi|217988679|gb|EEC54998.1| hypothetical protein BACEGG_00617 [Bacteroides eggerthii DSM 20697]
gi|316908966|gb|EFV30650.1| MotA/TolQ/ExbB proton channel family protein [Bacteroides eggerthii
1_2_48FAA]
Length = 270
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 60/105 (57%), Gaps = 3/105 (2%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI 172
I + ++ A A EL + + L +G++++ G L+G+LG V+GM+ F ++A S + +++
Sbjct: 156 IQKELEEATALELPMMEQNLPIIGTITTLGTLMGLLGTVIGMIRSFAALAAGGSADSMAL 215
Query: 173 P-GIIESLISILLGLCVSIPSSIAYNKFIE--DSKKFAMQMEGFA 214
GI E+LI+ G+ + I+YN + D +++ GF+
Sbjct: 216 SQGISEALINTAFGILTGALAVISYNYYTNKIDKLTYSLDEVGFS 260
>gi|71908823|ref|YP_286410.1| MotA/TolQ/ExbB proton channel [Dechloromonas aromatica RCB]
gi|71848444|gb|AAZ47940.1| MotA/TolQ/ExbB proton channel [Dechloromonas aromatica RCB]
Length = 201
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 89/189 (47%), Gaps = 25/189 (13%)
Query: 31 LFIFSILSWSVIIQ--------KSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNI 82
L + SI+S ++II+ K V L+R EF++ G + + + + L+ H +
Sbjct: 15 LLLASIISVALIIERVVALRRSKVVPHGLLQRAVGEFKR----GANNDKLLEELEGHSPL 70
Query: 83 GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAG 142
G + G R+ ++ + ++ A + E+ L+ LG+++S
Sbjct: 71 G-------------RVLSAGLRNVNSTREIMKESIEEAGSAVSHELNRYLTTLGTIASIS 117
Query: 143 LLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIED 202
L+G+ G V+GM+ F S + +N + GI +L + GL ++IPS IA+ F
Sbjct: 118 PLMGLFGTVVGMIEIFGSQSPSGANPMQLAHGISVALYNTGFGLVIAIPSLIAWRHFRAL 177
Query: 203 SKKFAMQME 211
+ F ++ME
Sbjct: 178 ADGFVVEME 186
>gi|329961711|ref|ZP_08299742.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Bacteroides fluxus YIT 12057]
gi|328531452|gb|EGF58292.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Bacteroides fluxus YIT 12057]
Length = 270
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 60/105 (57%), Gaps = 3/105 (2%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI 172
I + ++ A A EL + + L +G++++ G L+G+LG V+GM+ F ++A S + +++
Sbjct: 156 IQKELEEATALELPMMEQNLPIIGTITTLGTLMGLLGTVIGMIRSFAALAAGGSADSMAL 215
Query: 173 P-GIIESLISILLGLCVSIPSSIAYNKFIE--DSKKFAMQMEGFA 214
GI E+LI+ G+ + I+YN + D +++ GF+
Sbjct: 216 SQGISEALINTAFGILTGALAVISYNYYTNKIDKLTYSLDEVGFS 260
>gi|88810804|ref|ZP_01126061.1| MotA/TolQ/ExbB proton channel [Nitrococcus mobilis Nb-231]
gi|88792434|gb|EAR23544.1| MotA/TolQ/ExbB proton channel [Nitrococcus mobilis Nb-231]
Length = 200
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 50/89 (56%), Gaps = 1/89 (1%)
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISI 182
E + L+ LG++++ L+G+LG V+GM+ F SI+ NV ++ GI ++L +
Sbjct: 88 EAHGLERYLNTLGTIAAVSPLLGLLGTVIGMIKVFSSISSAGLGNVTALAGGISQALFTT 147
Query: 183 LLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
GL V+IP+ +AY F + + +E
Sbjct: 148 AAGLVVAIPTLMAYRYFRGKVETLVVDLE 176
>gi|319944096|ref|ZP_08018374.1| MotA/TolQ/ExbB proton channel family protein [Lautropia mirabilis
ATCC 51599]
gi|319742590|gb|EFV94999.1| MotA/TolQ/ExbB proton channel family protein [Lautropia mirabilis
ATCC 51599]
Length = 203
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 86/187 (45%), Gaps = 15/187 (8%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAI 87
I L + SI + ++I++++ ITL+R+ ++ G LE V +N
Sbjct: 12 IWFLILASIATVALIVERA---ITLQRR-----KILPPGM-LEEVVNLHRNRQLNAEMVT 62
Query: 88 FMSAMSEWKKSCDKGARSPIGIQDRIDRMMD---VAIARELEEITEKLSFLGSMSSAGLL 144
+ S + G R +D I M+ A+A +LE L LG++++ L
Sbjct: 63 RVERSSPLGRVLATGLRHEFESRDMIKDAMEETGRAVAHDLERF---LPTLGTLATVAPL 119
Query: 145 VGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSK 204
+G+ G V+GM+ F S A ++ GI +L + G+ V+IP+ +AY F
Sbjct: 120 LGLFGTVIGMIEIFGSQAPSGNDPTQLAHGISIALYNTAFGIGVAIPALLAYRGFRSRVD 179
Query: 205 KFAMQME 211
F ++ME
Sbjct: 180 DFLVEME 186
>gi|126209034|ref|YP_001054259.1| biopolymer transport ExbB protein [Actinobacillus pleuropneumoniae
L20]
gi|165977003|ref|YP_001652596.1| biopolymer transport ExbB protein [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
gi|190150901|ref|YP_001969426.1| biopolymer transport ExbB protein [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
gi|303253485|ref|ZP_07339627.1| biopolymer transport ExbB protein [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
gi|307248616|ref|ZP_07530630.1| Biopolymer transport ExbB protein [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
gi|307250849|ref|ZP_07532777.1| Biopolymer transport ExbB protein [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|307255476|ref|ZP_07537282.1| Biopolymer transport ExbB protein [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|307259928|ref|ZP_07541641.1| Biopolymer transport ExbB protein [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
gi|307262057|ref|ZP_07543711.1| Biopolymer transport ExbB protein [Actinobacillus pleuropneumoniae
serovar 12 str. 1096]
gi|307264254|ref|ZP_07545844.1| Biopolymer transport ExbB protein [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
gi|4127364|emb|CAA76936.1| TolQ protein [Actinobacillus pleuropneumoniae]
gi|28572164|gb|AAM63530.1| ExbB [Actinobacillus suis]
gi|28572170|gb|AAM63534.1| ExbB [Actinobacillus suis]
gi|49532664|dbj|BAD26602.1| cytoplasmic membrane protein [Actinobacillus suis]
gi|55978871|gb|AAV68897.1| ExbB [Haemophilus parasuis]
gi|126097826|gb|ABN74654.1| biopolymer transport ExbB protein [Actinobacillus pleuropneumoniae
serovar 5b str. L20]
gi|165877104|gb|ABY70152.1| biopolymer transport ExbB protein [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
gi|189916032|gb|ACE62284.1| biopolymer transport ExbB protein [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
gi|302647729|gb|EFL77943.1| biopolymer transport ExbB protein [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
gi|306854827|gb|EFM87016.1| Biopolymer transport ExbB protein [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
gi|306857099|gb|EFM89227.1| Biopolymer transport ExbB protein [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|306861518|gb|EFM93506.1| Biopolymer transport ExbB protein [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|306865956|gb|EFM97831.1| Biopolymer transport ExbB protein [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
gi|306868236|gb|EFN00059.1| Biopolymer transport ExbB protein [Actinobacillus pleuropneumoniae
serovar 12 str. 1096]
gi|306870425|gb|EFN02179.1| Biopolymer transport ExbB protein [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
Length = 222
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 95/207 (45%), Gaps = 7/207 (3%)
Query: 16 LFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKS 75
L Q + + +L SILSWS+I+ + + I +++ + L S +++ K
Sbjct: 6 LIKQQDIVLSVSFFILVFMSILSWSIILIRLIKIIGVKKNNQVTFNLIKSDENMNQAKKY 65
Query: 76 LKNHHNIGLAAIFMSAMSE---WKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKL 132
+N + ++ I + + ++ + + +D + + AI + L + L
Sbjct: 66 TQNKRS-DISEILQTTFKQCELYQLNGKYNLSHQLPFKDFLTLHLRNAITQSLRKYDGGL 124
Query: 133 SFLGSMSSAGLLVGILGAVLGMMGFFQSIA--GYYSNNVVSIPGIIESLISILLGLCVSI 190
L S+ + +G+ G V G+ I+ G S VS P I E+L++ +GL V+I
Sbjct: 125 VALASIGAVAPFIGLFGTVWGIFNALMDISQQGQVSIATVSAP-IGEALVATAMGLFVAI 183
Query: 191 PSSIAYNKFIEDSKKFAMQMEGFANEF 217
P+ +AYN ++ + ++ +ANE
Sbjct: 184 PAVLAYNLIARLNRNLSQDLDHYANEL 210
>gi|55978881|gb|AAV68902.1| ExbB [Haemophilus parasuis]
Length = 222
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 95/207 (45%), Gaps = 7/207 (3%)
Query: 16 LFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKS 75
L Q + + +L SILSWS+I+ + + I +++ + L S +++ K
Sbjct: 6 LIKQQDIVLSVSFFILVFMSILSWSIILIRLIKIIGVKKNNQVTFNLIKSDENMNXAKKY 65
Query: 76 LKNHHNIGLAAIFMSAMSE---WKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKL 132
+N + ++ I + + ++ + + +D + + AI + L + L
Sbjct: 66 TQNKRS-DISEILQTTFKQCELYQLNGKYNLSHQLPFKDFLTLHLRNAITQSLRKYDGGL 124
Query: 133 SFLGSMSSAGLLVGILGAVLGMMGFFQSIA--GYYSNNVVSIPGIIESLISILLGLCVSI 190
L S+ + +G+ G V G+ I+ G S VS P I E+L++ +GL V+I
Sbjct: 125 VALASIGAVAPFIGLFGTVWGIFNALMDISQQGQVSIATVSAP-IGEALVATAMGLFVAI 183
Query: 191 PSSIAYNKFIEDSKKFAMQMEGFANEF 217
P+ +AYN ++ + ++ +ANE
Sbjct: 184 PAVLAYNLIARLNRNLSQDLDHYANEL 210
>gi|329957407|ref|ZP_08297882.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Bacteroides clarus YIT 12056]
gi|328522284|gb|EGF49393.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Bacteroides clarus YIT 12056]
Length = 270
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 60/105 (57%), Gaps = 3/105 (2%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI 172
I + ++ A A EL + + L +G++++ G L+G+LG V+GM+ F ++A S + +++
Sbjct: 156 IQKELEEATALELPMMEQNLPIIGTITTLGTLMGLLGTVIGMIRSFAALAAGGSADSMAL 215
Query: 173 P-GIIESLISILLGLCVSIPSSIAYNKFIE--DSKKFAMQMEGFA 214
GI E+LI+ G+ + I+YN + D +++ GF+
Sbjct: 216 SQGISEALINTAFGILTGALAVISYNYYTNKIDKLTYSLDEVGFS 260
>gi|300115031|ref|YP_003761606.1| MotA/TolQ/ExbB proton channel [Nitrosococcus watsonii C-113]
gi|299540968|gb|ADJ29285.1| MotA/TolQ/ExbB proton channel [Nitrosococcus watsonii C-113]
Length = 481
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 60/111 (54%), Gaps = 4/111 (3%)
Query: 117 MDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GI 175
+D AI +E+ I L L +++ L+G+LG V GM+ FQSI + + + + GI
Sbjct: 357 LDEAILKEIPSIERGLPTLAILAAIAPLLGLLGTVTGMIETFQSITLFGTGDPKLMSGGI 416
Query: 176 IESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
++L++ LGL V+IP + ++ S + ++ E +AI++R E
Sbjct: 417 SQALVTTELGLAVAIPVLLIHSSLSSKSNRLVQVLD---EESAAIVARLAE 464
>gi|262372461|ref|ZP_06065740.1| TolQ [Acinetobacter junii SH205]
gi|262312486|gb|EEY93571.1| TolQ [Acinetobacter junii SH205]
Length = 209
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 96/194 (49%), Gaps = 17/194 (8%)
Query: 31 LFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHH--NIGLAAIF 88
L + SI + ++ I++ +I L+R LF +G + ETV +L+ L I
Sbjct: 15 LILSSIFTVAITIER---YIRLKRSQVLPRDLFVNGSNAETVISNLQQEQAKKSPLGRIL 71
Query: 89 MSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSS-AGLLVGI 147
++ E K+ ++ AR+ M+ A ++E+ + + ++FLG++S+ A LL +
Sbjct: 72 VAGY-EHKEQGEQFARA----------QMEAAASQEISFLEKNINFLGTLSAIAPLLGLL 120
Query: 148 LGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFA 207
+ + F G N + +PGI ++LI+ +G+ ++IP+ IAY F ++
Sbjct: 121 GTVLGIIESFLVFDVGSAGNASMMMPGISKALITTAVGMLIAIPAMIAYRYFQRVVHEYT 180
Query: 208 MQMEGFANEFSAIL 221
++E + F A L
Sbjct: 181 AELEQQSTLFHAAL 194
>gi|94265095|ref|ZP_01288861.1| MotA/TolQ/ExbB proton channel [delta proteobacterium MLMS-1]
gi|93454425|gb|EAT04720.1| MotA/TolQ/ExbB proton channel [delta proteobacterium MLMS-1]
Length = 473
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 117 MDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGI 175
MD AI RE+ ++ L+ + +++ L+G+LG V+GM+ FQ+I + + + + GI
Sbjct: 353 MDEAIHREIPKLERGLTTIKILAAVAPLLGLLGTVVGMIQTFQAITMFGTGDPQLMAGGI 412
Query: 176 IESLISILLGLCVSIP 191
++L++ LGL V+IP
Sbjct: 413 SQALVTTALGLSVAIP 428
>gi|94263160|ref|ZP_01286978.1| MotA/TolQ/ExbB proton channel [delta proteobacterium MLMS-1]
gi|93456531|gb|EAT06645.1| MotA/TolQ/ExbB proton channel [delta proteobacterium MLMS-1]
Length = 473
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 117 MDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGI 175
MD AI RE+ ++ L+ + +++ L+G+LG V+GM+ FQ+I + + + + GI
Sbjct: 353 MDEAIHREIPKLERGLTTIKILAAVAPLLGLLGTVVGMIQTFQAITMFGTGDPQLMAGGI 412
Query: 176 IESLISILLGLCVSIP 191
++L++ LGL V+IP
Sbjct: 413 SQALVTTALGLSVAIP 428
>gi|53715418|ref|YP_101410.1| MotA/TolQ/ExbB proton channel [Bacteroides fragilis YCH46]
gi|60683384|ref|YP_213528.1| putative transmembrane MotA/TolQ/ExbB proton channel family protein
[Bacteroides fragilis NCTC 9343]
gi|253567440|ref|ZP_04844888.1| MotA/TolQ/ExbB proton channel [Bacteroides sp. 3_2_5]
gi|265768315|ref|ZP_06095574.1| MotA/TolQ/ExbB proton channel [Bacteroides sp. 2_1_16]
gi|52218283|dbj|BAD50876.1| MotA/TolQ/ExbB proton channel [Bacteroides fragilis YCH46]
gi|60494818|emb|CAH09624.1| putative transmembrane MotA/TolQ/ExbB proton channel family protein
[Bacteroides fragilis NCTC 9343]
gi|251943822|gb|EES84361.1| MotA/TolQ/ExbB proton channel [Bacteroides sp. 3_2_5]
gi|263252250|gb|EEZ23798.1| MotA/TolQ/ExbB proton channel [Bacteroides sp. 2_1_16]
gi|301164858|emb|CBW24418.1| putative transmembrane MotA/TolQ/ExbB proton channel family protein
[Bacteroides fragilis 638R]
Length = 270
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 60/105 (57%), Gaps = 3/105 (2%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI 172
I + ++ A A EL + + L +G++++ G L+G+LG V+GM+ F ++A S + +++
Sbjct: 156 IQKELEEATALELPMMEQNLPIIGTITTLGTLMGLLGTVIGMIRSFAALAAGGSADSMAL 215
Query: 173 P-GIIESLISILLGLCVSIPSSIAYNKFIE--DSKKFAMQMEGFA 214
GI E+LI+ G+ + I+YN + D +++ GF+
Sbjct: 216 SQGISEALINTAFGILTGALAVISYNYYTNKIDKLTYSLDEVGFS 260
>gi|160890025|ref|ZP_02071028.1| hypothetical protein BACUNI_02460 [Bacteroides uniformis ATCC 8492]
gi|270294691|ref|ZP_06200893.1| conserved hypothetical protein [Bacteroides sp. D20]
gi|317481335|ref|ZP_07940403.1| MotA/TolQ/ExbB proton channel family protein [Bacteroides sp.
4_1_36]
gi|156860413|gb|EDO53844.1| hypothetical protein BACUNI_02460 [Bacteroides uniformis ATCC 8492]
gi|270276158|gb|EFA22018.1| conserved hypothetical protein [Bacteroides sp. D20]
gi|316902431|gb|EFV24317.1| MotA/TolQ/ExbB proton channel family protein [Bacteroides sp.
4_1_36]
Length = 270
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 60/105 (57%), Gaps = 3/105 (2%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI 172
I + ++ A A EL + + L +G++++ G L+G+LG V+GM+ F ++A S + +++
Sbjct: 156 IQKELEEATALELPMMEQNLPIIGTITTLGTLMGLLGTVIGMIRSFAALAAGGSADSMAL 215
Query: 173 P-GIIESLISILLGLCVSIPSSIAYNKFIE--DSKKFAMQMEGFA 214
GI E+LI+ G+ + I+YN + D +++ GF+
Sbjct: 216 SQGISEALINTAFGILTGALAVISYNYYTNKIDKLTYSLDEVGFS 260
>gi|224025358|ref|ZP_03643724.1| hypothetical protein BACCOPRO_02097 [Bacteroides coprophilus DSM
18228]
gi|224018594|gb|EEF76592.1| hypothetical protein BACCOPRO_02097 [Bacteroides coprophilus DSM
18228]
Length = 239
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 54/105 (51%), Gaps = 2/105 (1%)
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI--PGIIESLIS 181
E+ ++ LS + ++S ++G LG V GM+ F ++A +N +++ GI E++I+
Sbjct: 134 EVAKLENGLSIIATISGGAPMLGFLGTVTGMVQAFWNMANAGNNIDITLLSSGIYEAMIT 193
Query: 182 ILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+ GL V I + AYN + K QME F +L+ +
Sbjct: 194 TVGGLVVGIATMFAYNHLVYRVDKVVSQMEARTIAFMDLLNEPND 238
>gi|51246826|ref|YP_066710.1| transport protein TolQ [Desulfotalea psychrophila LSv54]
gi|50877863|emb|CAG37703.1| related to transport protein TolQ [Desulfotalea psychrophila LSv54]
Length = 463
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 51/89 (57%), Gaps = 3/89 (3%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA--GYYSNN 168
D +D +M RE+ + LS +G ++S L+G+LG V GM+ FQ+I G
Sbjct: 349 DTLDNVMQEGYLREIGGLERFLSLVGVLASIAPLLGLLGTVTGMINTFQAITIFGTGDPR 408
Query: 169 VVSIPGIIESLISILLGLCVSIPSSIAYN 197
++S GI E+L++ GL ++IP +A++
Sbjct: 409 MMST-GISEALVTTQAGLGIAIPLLLAHH 436
>gi|261378938|ref|ZP_05983511.1| biopolymer transport protein ExbB [Neisseria cinerea ATCC 14685]
gi|269144636|gb|EEZ71054.1| biopolymer transport protein ExbB [Neisseria cinerea ATCC 14685]
Length = 219
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/205 (19%), Positives = 91/205 (44%), Gaps = 7/205 (3%)
Query: 27 IITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAA 86
+ L+ + SI++W +I+ +S+ R+ +Q + SL + ++ + L+
Sbjct: 17 VFVLMLLMSIVTWCLIVLRSIKLYQARKGNMVVKQHMSNTLSLNDALEKVR-AVDAPLSK 75
Query: 87 IFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSF----LGSMSSAG 142
+ A+ ++ A S + ++ + + I + +I + + L S+ +
Sbjct: 76 LAQEALQSYRNYRQNEA-SKLAQALPLNEYLVIQIRNSMAQIMRRFDYGMTALASIGATA 134
Query: 143 LLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCVSIPSSIAYNKFIE 201
+G+ G V G+ +I ++ ++ G I E+L+S GL V+IP+ +AYN
Sbjct: 135 PFIGLFGTVWGIYHALINIGQSGQMSIAAVAGPIGEALVSTAAGLFVAIPAVLAYNFLNR 194
Query: 202 DSKKFAMQMEGFANEFSAILSRQTE 226
+K ++ A++ L Q +
Sbjct: 195 GAKTLTQDLDAMAHDLHVRLLNQKD 219
>gi|330963822|gb|EGH64082.1| biopolymer transport protein ExbB [Pseudomonas syringae pv.
actinidiae str. M302091]
Length = 123
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 61/124 (49%), Gaps = 11/124 (8%)
Query: 24 VKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCK-------SL 76
V ++ L +FS+LSW++++ KS ++ + Q ++F + FWS L T + +L
Sbjct: 3 VPAVLWALIVFSVLSWALLLIKSAQYVRQKSQNKQFTKAFWSAPDLLTAAEHSAQYPGAL 62
Query: 77 KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLG 136
N G A+ A+ E ++ + A + I DR++R + I +E + + L
Sbjct: 63 ARIANSGFEAM---AVDESPRTTQQLAHT-INRSDRLERNLRQQIQKERRALESGQAILA 118
Query: 137 SMSS 140
S+ S
Sbjct: 119 SIGS 122
>gi|328952085|ref|YP_004369419.1| MotA/TolQ/ExbB proton channel [Desulfobacca acetoxidans DSM 11109]
gi|328452409|gb|AEB08238.1| MotA/TolQ/ExbB proton channel [Desulfobacca acetoxidans DSM 11109]
Length = 231
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 76/166 (45%), Gaps = 20/166 (12%)
Query: 40 SVIIQKSVNFITLR----RQFREFEQLFWSGQSLETVCKSLKNHHNIGLAA-IFMSAMSE 94
++ I K++ F R R E E G + + + GL A + ++A+ E
Sbjct: 31 AIAIDKALTFYRYRFNLDRFVAEIEPFLQQGDWPQIISRC---EQESGLEARMLLAALRE 87
Query: 95 WKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGM 154
+S +K + +M+ R + ++L FLG++ + +G+ G VLG+
Sbjct: 88 ISRSKEK-----------VQHIMEGERLRVELYLGKRLGFLGTLGANAPFIGLFGTVLGI 136
Query: 155 MGFFQSIA-GYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKF 199
+ F+ +A + GI E+L++ +GL V+IP+ + YN F
Sbjct: 137 IHAFKDLALAEGGGGPAVMAGIAEALVATAVGLLVAIPAVVLYNFF 182
>gi|255012048|ref|ZP_05284174.1| putative transmembrane MotA/TolQ/ExbB proton channel family protein
[Bacteroides fragilis 3_1_12]
gi|313149890|ref|ZP_07812083.1| MotA/TolQ/ExbB proton channel [Bacteroides fragilis 3_1_12]
gi|313138657|gb|EFR56017.1| MotA/TolQ/ExbB proton channel [Bacteroides fragilis 3_1_12]
Length = 270
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 60/105 (57%), Gaps = 3/105 (2%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI 172
I + ++ A A EL + + L +G++++ G L+G+LG V+GM+ F ++A S + +++
Sbjct: 156 IQKELEEATALELPMMEQNLPIIGTITTLGTLMGLLGTVIGMIRSFAALAAGGSADSMAL 215
Query: 173 P-GIIESLISILLGLCVSIPSSIAYNKFIE--DSKKFAMQMEGFA 214
GI E+LI+ G+ + I+YN + D +++ GF+
Sbjct: 216 SQGISEALINTAFGILTGALAVISYNYYTNKIDKLTYSLDEVGFS 260
>gi|189468465|ref|ZP_03017250.1| hypothetical protein BACINT_04863 [Bacteroides intestinalis DSM
17393]
gi|189436729|gb|EDV05714.1| hypothetical protein BACINT_04863 [Bacteroides intestinalis DSM
17393]
Length = 270
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 60/105 (57%), Gaps = 3/105 (2%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI 172
I + ++ A A EL + + L +G++++ G L+G+LG V+GM+ F ++A S + +++
Sbjct: 156 IQKELEEATALELPMMEQNLPIIGTITTLGTLMGLLGTVIGMIRSFAALAAGGSADSMAL 215
Query: 173 P-GIIESLISILLGLCVSIPSSIAYNKFIE--DSKKFAMQMEGFA 214
GI E+LI+ G+ + I+YN + D +++ GF+
Sbjct: 216 SQGISEALINTAFGILTGALAVISYNYYTNKIDKLTYSLDEVGFS 260
>gi|78222671|ref|YP_384418.1| MotA/TolQ/ExbB proton channel [Geobacter metallireducens GS-15]
gi|78193926|gb|ABB31693.1| outer membrane transport energization protein ExbB [Geobacter
metallireducens GS-15]
Length = 603
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 93/219 (42%), Gaps = 22/219 (10%)
Query: 5 GLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFW 64
G AI+ + F LF+ G+ F++ L+ I++ + F+ F E
Sbjct: 391 GWAIIGLCTFMLFLAAGV---------FVYKFLALQKIVKGNEMFL---ESFGELHDPL- 437
Query: 65 SGQSLETVCKSLKNHHNIGLAAIFMSAMSEW--KKSCDK--GARSPIGIQDRIDRMMDVA 120
+LE LK+ + + W ++S DK + SP + + +D A
Sbjct: 438 ---ALEDTDDDLKHSSMYRIYQAGKIEIERWLARQSADKEISSLSPSAL-NIFRSSLDKA 493
Query: 121 IARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESL 179
+E + ++ L + S G G+LG V G+M F S+A N+ +I PG+ +L
Sbjct: 494 NVKEKQNLSSWLIVMTLGISGGPFWGLLGTVWGVMNTFASLAESGEANLTAIAPGVASAL 553
Query: 180 ISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFS 218
L GL V+IP+ AY+ K F +E++
Sbjct: 554 ACTLFGLFVAIPALFAYSYLTNRMKNLNADTHVFIDEYA 592
>gi|303257948|ref|ZP_07343957.1| MotA/TolQ/ExbB proton channel family protein [Burkholderiales
bacterium 1_1_47]
gi|302859291|gb|EFL82373.1| MotA/TolQ/ExbB proton channel family protein [Burkholderiales
bacterium 1_1_47]
Length = 213
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 59/107 (55%), Gaps = 11/107 (10%)
Query: 123 RELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-----GIIE 177
+ + + L++L +S+ L+G+LG V+GM+ F++I S NV P GI
Sbjct: 96 KHFKPVNNALTWLKLISAVSPLLGLLGTVVGMVTVFRTI----SENVSPDPTMLAGGIWT 151
Query: 178 SLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+LI+ ++GL V+IP+ +AY + K+ +++E + A+ R+
Sbjct: 152 ALITTVMGLVVAIPALMAYYYLMLKVKE--LRIEAVEYSYRALNIRR 196
>gi|183396675|dbj|BAG28274.1| MotA/TolQ/Exb proton channel [Desulfotignum balticum]
Length = 490
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 65/129 (50%), Gaps = 17/129 (13%)
Query: 64 WSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAR 123
W G E +C+S KN + I ++A++ S QD ++ + AI
Sbjct: 339 WEG--CEALCRSRKNKW---IPRILLTALAFRDHSR----------QD-MENALQEAILG 382
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISI 182
E+ I +S LG +++ L+G+LG V GM+ F I Y + + + GI E+L++
Sbjct: 383 EIPAIERFVSTLGMLAAIAPLLGLLGTVTGMINTFHVITYYGAGDPKMMSGGISEALVTT 442
Query: 183 LLGLCVSIP 191
+LGL V+IP
Sbjct: 443 MLGLTVAIP 451
>gi|310779065|ref|YP_003967398.1| outer membrane transport energization protein ExbB [Ilyobacter
polytropus DSM 2926]
gi|309748388|gb|ADO83050.1| outer membrane transport energization protein ExbB [Ilyobacter
polytropus DSM 2926]
Length = 203
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 82/171 (47%), Gaps = 15/171 (8%)
Query: 35 SILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL-----ETVCKSLKNHHNIGLAAIFM 89
S++ +V+I KS+ F + ++ F+ + W+ + T +L H+ +
Sbjct: 18 SVIGLAVVIDKSIYFAS--KEKGNFDDIKWNVKEYIEKGDYTGAFALLEKHDCSTYKVLK 75
Query: 90 SAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILG 149
+ + K+ D I ++ +V ++ +L + + LG ++ L+G+LG
Sbjct: 76 ELLLQCTKNKD------YSIVHMEEKAREVGLS-QLPRLERGMWLLGIVAHTTPLLGLLG 128
Query: 150 AVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKF 199
V GM+ F +IA Y + + V GI ++LI+ GL V+IP+ I YN F
Sbjct: 129 TVTGMIQAFHAIASYGTGDPSVLAEGISKALITTAGGLTVAIPAVIFYNYF 179
>gi|319900972|ref|YP_004160700.1| outer membrane transport energization protein ExbB [Bacteroides
helcogenes P 36-108]
gi|319416003|gb|ADV43114.1| outer membrane transport energization protein ExbB [Bacteroides
helcogenes P 36-108]
Length = 270
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 60/105 (57%), Gaps = 3/105 (2%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI 172
I + ++ A A EL + + L +G++++ G L+G+LG V+GM+ F ++A S + +++
Sbjct: 156 IQKELEEATALELPMMEQNLPIIGTITTLGTLMGLLGTVIGMIRSFAALAAGGSADSMAL 215
Query: 173 P-GIIESLISILLGLCVSIPSSIAYNKFIE--DSKKFAMQMEGFA 214
GI E+LI+ G+ + I+YN + D +++ GF+
Sbjct: 216 SQGISEALINTAFGILTGALAVISYNYYTNKIDKLTYSLDEVGFS 260
>gi|119946950|ref|YP_944630.1| MotA/TolQ/ExbB proton channel [Psychromonas ingrahamii 37]
gi|119865554|gb|ABM05031.1| MotA/TolQ/ExbB proton channel [Psychromonas ingrahamii 37]
Length = 332
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 59/112 (52%), Gaps = 1/112 (0%)
Query: 114 DRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI- 172
+ M+ R++ ++ + L ++ + ++GILG VLG++ F + NN +
Sbjct: 110 NEKMESYAERKIHNMSRGQTLLDTVITLAPMLGILGTVLGIIHSFNILGVQGVNNPTEVV 169
Query: 173 PGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
GI ++L+S +GL V++ + + +N F ++ + +EG +EF I +Q
Sbjct: 170 AGIAQALVSTAMGLSVALLALLPFNLFRALLQRLTLHLEGVGSEFYHICHQQ 221
>gi|328952950|ref|YP_004370284.1| MotA/TolQ/ExbB proton channel [Desulfobacca acetoxidans DSM 11109]
gi|328453274|gb|AEB09103.1| MotA/TolQ/ExbB proton channel [Desulfobacca acetoxidans DSM 11109]
Length = 231
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA-GYYSNNVVSIPGIIESLISILLGLCV 188
++L FLG++ + +G+ G VLG++ F+ +A + GI E+LI+ +GL V
Sbjct: 112 KRLGFLGTLGANAPFIGLFGTVLGIIHAFKDLALAEGGGGPAVMAGIAEALIATAVGLLV 171
Query: 189 SIPSSIAYNKF 199
+IP+ + YN F
Sbjct: 172 AIPAVVMYNLF 182
>gi|325518968|gb|EGC98500.1| biopolymer transport protein [Burkholderia sp. TJI49]
Length = 110
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 52/100 (52%), Gaps = 1/100 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
+ +S + LF+Q VK I+ +L + S+L+W+VI K + F LR + R + + +
Sbjct: 7 VQHLSPWDLFVQADAIVKAIMIVLALASLLTWAVIADKLIRFRELRARARRWSAALDTPE 66
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKG-ARSP 106
L + +L+ A I+ + SEW S +G ARSP
Sbjct: 67 RLRALADALRTQPADPFARIYAALGSEWDDSQRRGLARSP 106
>gi|126442171|ref|YP_001060428.1| MotA/TolQ/ExbB proton channel family protein [Burkholderia
pseudomallei 668]
gi|126221664|gb|ABN85170.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei 668]
Length = 235
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 56/119 (47%), Gaps = 7/119 (5%)
Query: 106 PIGIQDRIDRMMDV--AIARELEEITEKLSF----LGSMSSAGLLVGILGAVLGMMGFFQ 159
P + R++R V A+ L +L F L S+ S VG+LG V G+
Sbjct: 97 PHALAARVERGERVLRALRHALRASQRRLEFGQVLLASIGSTAPFVGLLGTVWGIYHALG 156
Query: 160 SIAGYYSNNVVSIPGII-ESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEF 217
SIA + ++ G + E+L GL V+IP+ +AYN ++ +++GFA +
Sbjct: 157 SIAASGQAQIENVAGPVGEALTMTAFGLVVAIPAVLAYNILGRLVRQLVEELDGFARDL 215
>gi|224535148|ref|ZP_03675687.1| hypothetical protein BACCELL_00008 [Bacteroides cellulosilyticus
DSM 14838]
gi|224523198|gb|EEF92303.1| hypothetical protein BACCELL_00008 [Bacteroides cellulosilyticus
DSM 14838]
Length = 130
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 60/107 (56%), Gaps = 11/107 (10%)
Query: 119 VAIARELEEIT--------EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+AI +ELEE T + L +G++++ G L+G+LG V+GM+ F ++A S + +
Sbjct: 14 LAIQKELEEATALELPMMEQNLPIIGTITTLGTLMGLLGTVIGMIRSFAALAAGGSADSM 73
Query: 171 SIP-GIIESLISILLGLCVSIPSSIAYNKFIE--DSKKFAMQMEGFA 214
++ GI E+LI+ G+ + I+YN + D +++ GF+
Sbjct: 74 ALSQGISEALINTAFGILTGALAVISYNYYTNKIDKLTYSLDEVGFS 120
>gi|153877900|ref|ZP_02004410.1| MotA/TolQ/ExbB proton channel family protein [Beggiatoa sp. PS]
gi|152065636|gb|EDN65590.1| MotA/TolQ/ExbB proton channel family protein [Beggiatoa sp. PS]
Length = 202
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 83/186 (44%), Gaps = 35/186 (18%)
Query: 63 FWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKS--CDKG------ARSPIG------ 108
FWS Q V K L ++ + +W K DK + SP+G
Sbjct: 30 FWSLQKKRVVPKGL------------VAQVWKWTKEDKLDKKRLTLLRSHSPLGQILAAG 77
Query: 109 -IQDRIDR-MMDVAIARE----LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA 162
+ DR MM +I E + ++ L+ LG+++ L+G+LG V GM+ F ++
Sbjct: 78 LVNRHHDREMMKASIEEESSQVIHDLERYLNALGTIAEIAPLLGLLGTVTGMIRMFAAVG 137
Query: 163 --GYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAI 220
G + V+S G+ E+LI+ GL V+IP+ I Y F + + ME A + I
Sbjct: 138 EVGLGNPQVLS-SGLSEALITTAAGLSVAIPAFIFYRYFRGLIDELVLSMEQEALKMIDI 196
Query: 221 LSRQTE 226
L + E
Sbjct: 197 LHGERE 202
>gi|153007292|ref|YP_001381617.1| MotA/TolQ/ExbB proton channel [Anaeromyxobacter sp. Fw109-5]
gi|152030865|gb|ABS28633.1| MotA/TolQ/ExbB proton channel [Anaeromyxobacter sp. Fw109-5]
Length = 226
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 50/94 (53%), Gaps = 3/94 (3%)
Query: 106 PIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYY 165
P G QD + MD A RE +I + +L + + L+G+LG ++G++G F ++A
Sbjct: 91 PKGEQD-VQAAMDEATLRESPKIEARTGYLAMLGNVATLLGLLGTIVGLIGAFGAVANAN 149
Query: 166 SNNVVSI--PGIIESLISILLGLCVSIPSSIAYN 197
+ +I I E++ GL +IP+ +AY+
Sbjct: 150 PADKATILADSISEAMNCTAFGLLTAIPALVAYS 183
>gi|294775204|ref|ZP_06740728.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Bacteroides vulgatus PC510]
gi|294450909|gb|EFG19385.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Bacteroides vulgatus PC510]
Length = 271
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 60/105 (57%), Gaps = 3/105 (2%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI-AGYYSNNVVS 171
I + ++ A A EL + + L +G++++ G L+G+LG V+GM+ F ++ AG ++++
Sbjct: 157 IQKELEEATALELPMMEQNLPVIGTITTLGTLMGLLGTVIGMIRSFAALSAGGGTDSMAL 216
Query: 172 IPGIIESLISILLGLCVSIPSSIAYNKFIE--DSKKFAMQMEGFA 214
GI E+LI+ G+ + I+YN + D +++ GF+
Sbjct: 217 SQGISEALINTAFGILTGALAVISYNYYTNKIDKLTYSLDEVGFS 261
>gi|291287516|ref|YP_003504332.1| MotA/TolQ/ExbB proton channel [Denitrovibrio acetiphilus DSM 12809]
gi|290884676|gb|ADD68376.1| MotA/TolQ/ExbB proton channel [Denitrovibrio acetiphilus DSM 12809]
Length = 198
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 79/167 (47%), Gaps = 21/167 (12%)
Query: 27 IITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAA 86
++ L I S+ W +I K+ F+ +R+ S S E + + ++G A
Sbjct: 19 VMPALLISSLFMWLLIFMKAFQFVQIRK----------SEVSFEECMEGFRAGTHVGAA- 67
Query: 87 IFMSAMSEWKKSCDKGARSPIGIQDRI-DRMMDVAIARELEEITEKLSFLGSMSSAGLLV 145
W+K + AR I + + +RM++ ++ I++ ++ + ++SA L
Sbjct: 68 --------WQKDVMQFARESIFLSGKYRNRMLNSYLSTVTSGISQHVNTVLILASAAPLF 119
Query: 146 GILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISILLGLCVSIP 191
G+ G V GM+ F I+ Y + N ++ GI +L++ GL V++P
Sbjct: 120 GLFGTVSGMIDTFNVISYYGTGNPRAMASGISVALVTTQAGLVVAVP 166
>gi|331019436|gb|EGH99492.1| biopolymer transport protein ExbB [Pseudomonas syringae pv.
lachrymans str. M302278PT]
Length = 124
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 61/124 (49%), Gaps = 11/124 (8%)
Query: 24 VKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCK-------SL 76
V ++ L +FS+LSW++++ KS ++ + Q ++F + FWS L T + +L
Sbjct: 3 VPAVLWALIVFSVLSWALLLIKSAQYVRQKSQNKQFTKAFWSAPDLLTAAEHSAQYPGAL 62
Query: 77 KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLG 136
N G A+ A+ E ++ + A + I DR++R + I +E + + L
Sbjct: 63 ARIANSGFEAM---AVDESPRTTQQLAHT-INRSDRLERNLRQQIQKERRALESGQAILA 118
Query: 137 SMSS 140
S+ S
Sbjct: 119 SIGS 122
>gi|150004174|ref|YP_001298918.1| MotA/TolQ/ExbB proton channel [Bacteroides vulgatus ATCC 8482]
gi|254884810|ref|ZP_05257520.1| MotA/TolQ/ExbB proton channel [Bacteroides sp. 4_3_47FAA]
gi|319644108|ref|ZP_07998652.1| MotA/TolQ/ExbB proton channel [Bacteroides sp. 3_1_40A]
gi|149932598|gb|ABR39296.1| MotA/TolQ/ExbB proton channel [Bacteroides vulgatus ATCC 8482]
gi|254837603|gb|EET17912.1| MotA/TolQ/ExbB proton channel [Bacteroides sp. 4_3_47FAA]
gi|317384330|gb|EFV65300.1| MotA/TolQ/ExbB proton channel [Bacteroides sp. 3_1_40A]
Length = 271
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 60/105 (57%), Gaps = 3/105 (2%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI-AGYYSNNVVS 171
I + ++ A A EL + + L +G++++ G L+G+LG V+GM+ F ++ AG ++++
Sbjct: 157 IQKELEEATALELPMMEQNLPVIGTITTLGTLMGLLGTVIGMIRSFAALSAGGGTDSMAL 216
Query: 172 IPGIIESLISILLGLCVSIPSSIAYNKFIE--DSKKFAMQMEGFA 214
GI E+LI+ G+ + I+YN + D +++ GF+
Sbjct: 217 SQGISEALINTAFGILTGALAVISYNYYTNKIDKLTYSLDEVGFS 261
>gi|254445128|ref|ZP_05058604.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Verrucomicrobiae bacterium DG1235]
gi|198259436|gb|EDY83744.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Verrucomicrobiae bacterium DG1235]
Length = 462
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 78/179 (43%), Gaps = 10/179 (5%)
Query: 34 FSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMS 93
F+ LS +V K+V +L + F L V L N G A +A
Sbjct: 279 FAFLSLAVAAFKTVELSSLPKPKEGF---------LSEVLSKLANRDKEGAAHAANTASG 329
Query: 94 EWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLG 153
K +G + + ++ ++ ++ ++ L F+ ++ L+G+LG V G
Sbjct: 330 PMGKMIQQGVKYSDHDPELVEEILYESMVDTQPKVMRLLPFISVTAAVAPLLGLLGTVTG 389
Query: 154 MMGFFQSIAGYYSNNVVSIP-GIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
M+ F I + + + S+ GI E+LI+ GL V+IP+ + Y +K + +ME
Sbjct: 390 MINTFNRIKIFGTGDAKSLSGGISEALITTEFGLIVAIPALLLYAILSRKAKGYLARME 448
>gi|213416756|ref|ZP_03349900.1| biopolymer transport protein ExbB [Salmonella enterica subsp.
enterica serovar Typhi str. E01-6750]
Length = 183
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 13/168 (7%)
Query: 73 CKSLKNHHNI--GLAAIFMSA--MSEWKKSCD--KGARSPIGIQDRIDRMMD---VAIAR 123
+SL +I G +A +SA ++E + + +G+ GI++R ++ A+ R
Sbjct: 4 ARSLDQASDIAAGFSAKSLSAQLINEAQNELELSQGSEDNEGIKERTGFRLERRVAAVGR 63
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISI 182
+ L+ +G++S VG+ G V G+M F IA + N+ V PGI E+L++
Sbjct: 64 YMGRGNGYLATIGAISP---FVGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGIAEALLAT 120
Query: 183 LLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
+GL +IP+ + YN F + + A + + SR + N S
Sbjct: 121 AIGLVAAIPAVVIYNIFARQIGSYKATLGDVAAQVLLLQSRDLDLNAS 168
>gi|212635854|ref|YP_002312379.1| biopolymer transport ExbB protein [Shewanella piezotolerans WP3]
gi|212557338|gb|ACJ29792.1| Biopolymer transport exbB protein [Shewanella piezotolerans WP3]
Length = 209
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 82/162 (50%), Gaps = 19/162 (11%)
Query: 45 KSVNFITLR-RQFREFEQLFWSGQSLETVCKSLKNHHNIGL----AAIFMSAMSEWKKSC 99
K +NF L Q E++ FW SL T+ K +NI L + ++ K+
Sbjct: 31 KLINFFKLGINQRNEYQ--FWLA-SLPTIDKMTFRGNNIRLNHPATRLIQFCVNALPKAL 87
Query: 100 DKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQ 159
D+ A ++D+ + +E+ ++ + + L +S+ L+G+LG VLGM+ FQ
Sbjct: 88 DRQA-----LEDK----ATLKAEQEIAQLKQGMRALEVISALAPLIGLLGTVLGMIDAFQ 138
Query: 160 SI--AGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKF 199
++ AG + V GI ++L++ GL V+IP++ A++ F
Sbjct: 139 NLQQAGTKVDPAVLSGGISQALLTTAAGLIVAIPTTAAWHFF 180
>gi|300113154|ref|YP_003759729.1| MotA/TolQ/ExbB proton channel [Nitrosococcus watsonii C-113]
gi|299539091|gb|ADJ27408.1| MotA/TolQ/ExbB proton channel [Nitrosococcus watsonii C-113]
Length = 233
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI-AGYYSNNVVSIPGIIESLISILLG 185
E+ L+ LG++++ L+G+LG V+GM+ F I A N V GI E+LI+ G
Sbjct: 102 ELERFLNTLGTIAAITPLLGLLGTVIGMIKVFTVITAQGVDNPAVLAGGISEALITTAAG 161
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQME 211
L V+IPS + Y F + + ME
Sbjct: 162 LAVAIPSLMFYRYFHGKVMRLVVDME 187
>gi|119896905|ref|YP_932118.1| biopolymer transport protein ExbB [Azoarcus sp. BH72]
gi|119669318|emb|CAL93231.1| probable biopolymer transport protein ExbB [Azoarcus sp. BH72]
Length = 253
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 95/215 (44%), Gaps = 11/215 (5%)
Query: 16 LFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKS 75
L+ Q ++ + LL S+ SW +I+ +++ + RR + FW+ L K
Sbjct: 12 LWGQSDAIIRTVAILLLAMSVTSWYLILVRALRQLRARRSIDAVDA-FWAASDLSQGLKR 70
Query: 76 LKNHHNIG----LAAIFMSAMSEWKKSCDK---GARSPIGIQDRIDRMMDVAIARELEEI 128
L++ LA +A ++ + G + + + I R + +I+ +
Sbjct: 71 LQDQAPDSPFDDLARQGAAAADHVRRHTHQETLGGK--LDADEFITRALRKSISLSTARL 128
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLC 187
L+ L S+ S VG+ G V G+ +I+ + + G + E+LI GL
Sbjct: 129 EAGLTMLASIGSTAPFVGLFGTVWGIYHALVNISASGMATLDKVAGPVGEALIMTAFGLF 188
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
V+IP+ +AYN F ++ +++ FA++ A S
Sbjct: 189 VAIPAVLAYNAFTRANRVELSELDAFAHDLHAWFS 223
>gi|90021706|ref|YP_527533.1| MotA/TolQ/ExbB proton channel [Saccharophagus degradans 2-40]
gi|89951306|gb|ABD81321.1| MotA/TolQ/ExbB proton channel [Saccharophagus degradans 2-40]
Length = 209
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 52/88 (59%), Gaps = 1/88 (1%)
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISIL 183
+ E+ + L LG++++ L+G+LG V+GM+ F ++ + N + GI E+L++
Sbjct: 101 VHELEKFLGALGTIAAIAPLLGLLGTVIGMIKVFTALNLEGATNAAPLAGGISEALVTTA 160
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQME 211
+GL V+IP+ +A+ F+ + + +E
Sbjct: 161 VGLFVAIPAMMAHRFFVRRVEALVVTLE 188
>gi|193213160|ref|YP_001999113.1| MotA/TolQ/ExbB proton channel [Chlorobaculum parvum NCIB 8327]
gi|193086637|gb|ACF11913.1| MotA/TolQ/ExbB proton channel [Chlorobaculum parvum NCIB 8327]
Length = 249
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 68/140 (48%), Gaps = 11/140 (7%)
Query: 78 NHHNIGLAAIFMSAMSEWK-----KSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKL 132
+ H LAA+ + + +K D+ R +++ ++ A E+ + + L
Sbjct: 98 DDHQSSLAAVMRAVLDRYKMLAVHNVTDREKRI-----SEMEKAVEEATVMEMPLLEKNL 152
Query: 133 SFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISILLGLCVSIP 191
+ +++S +VG+LG LGM+ F ++A + + V + GI E+L + LG+ I
Sbjct: 153 VAISTIASISTMVGLLGTTLGMIRAFAAMATSGAPDAVQLSLGISEALFNTALGILGGIM 212
Query: 192 SSIAYNKFIEDSKKFAMQME 211
+AYN F KF+ Q++
Sbjct: 213 GIVAYNVFTNRVDKFSYQID 232
>gi|281356692|ref|ZP_06243183.1| MotA/TolQ/ExbB proton channel [Victivallis vadensis ATCC BAA-548]
gi|281316819|gb|EFB00842.1| MotA/TolQ/ExbB proton channel [Victivallis vadensis ATCC BAA-548]
Length = 215
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 54/116 (46%), Gaps = 1/116 (0%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
+ I + +D A E+ ++ ++ LG++ L+G LG VLGMM FQ A + +
Sbjct: 87 DEDIRQAIDDAALEEMPKLERHINLLGTIGFVMPLIGFLGTVLGMMRAFQVAANAEALSA 146
Query: 170 VSIPGIIE-SLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
I + +LI+ L V+IP IAYN + + ME + E R+
Sbjct: 147 ERISEAVNMALITTASALVVAIPCYIAYNYLVARVNSITLDMEKASLEIMNFFERR 202
>gi|213585736|ref|ZP_03367562.1| biopolymer transport protein ExbB [Salmonella enterica subsp.
enterica serovar Typhi str. E98-0664]
Length = 173
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 65/134 (48%), Gaps = 7/134 (5%)
Query: 101 KGARSPIGIQDRIDRMMD---VAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGF 157
+G+ GI++R ++ A+ R + L+ +G++S VG+ G V G+M
Sbjct: 28 QGSEDNEGIKERTGFRLERRVAAVGRYMGRGNGYLATIGAISP---FVGLFGTVWGIMNS 84
Query: 158 FQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANE 216
F IA + N+ V PGI E+L++ +GL +IP+ + YN F + + A +
Sbjct: 85 FIGIAQTQTTNLAVVAPGIAEALLATAIGLVAAIPAVVIYNIFARQIGSYKATLGDVAAQ 144
Query: 217 FSAILSRQTEGNIS 230
+ SR + N S
Sbjct: 145 VLLLQSRDLDLNAS 158
>gi|171915259|ref|ZP_02930729.1| MotA/TolQ/ExbB proton channel family domain protein
[Verrucomicrobium spinosum DSM 4136]
Length = 231
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 53/106 (50%), Gaps = 4/106 (3%)
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFF---QSIAGYYSNNVVSIPGIIESLI 180
E+ + LS L ++ A L+G+LG + G+M F ++ GY + V+ G+ +SLI
Sbjct: 99 EVPRLERYLSVLHGIAHAAPLIGLLGTIAGLMDTFTQLNNVNGYATPADVA-RGVYQSLI 157
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+ LGL V+IPS + Y+ ++ +E E IL E
Sbjct: 158 TSALGLVVAIPSFLFYSFLAAKARHLMHDLERAGIEVVNILDDHRE 203
>gi|311747245|ref|ZP_07721030.1| MotA/TolQ/ExbB proton channel family protein [Algoriphagus sp. PR1]
gi|126578956|gb|EAZ83120.1| MotA/TolQ/ExbB proton channel family protein [Algoriphagus sp. PR1]
Length = 230
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 54/104 (51%), Gaps = 4/104 (3%)
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA---GYYSNNVVSIPGIIESLI 180
E+ ++ + L+ L ++S A ++G LG V GM+ F +IA G S ++S GI E++I
Sbjct: 128 EIYKLEKNLNLLATVSGAAPMIGFLGTVAGMIQAFIAIAQEEGMVSPKLLS-EGIYEAMI 186
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+ GL V I + + YN + K ME EF +L +
Sbjct: 187 TTAAGLVVGIVAYLGYNYLVSKVSKLVHNMEYTTVEFIDLLQDK 230
>gi|153003047|ref|YP_001377372.1| MotA/TolQ/ExbB proton channel [Anaeromyxobacter sp. Fw109-5]
gi|152026620|gb|ABS24388.1| MotA/TolQ/ExbB proton channel [Anaeromyxobacter sp. Fw109-5]
Length = 209
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 56/102 (54%), Gaps = 4/102 (3%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMM-GFFQ--SIAGYYSN 167
D + ++ I R + ++L+FLG++ + +G+ G VLG++ FF+ G
Sbjct: 89 DAVREVVSGTIERSRIDYEQRLAFLGTLGNNAPFIGLFGTVLGIVRAFFELSRNPGAAGA 148
Query: 168 NVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQ 209
V + GI E+L++ +GL V++P+ +AYN F ++ A +
Sbjct: 149 GTV-MAGISEALVATAVGLFVALPAVVAYNLFQRGLRRTAQR 189
>gi|156310390|ref|XP_001617735.1| hypothetical protein NEMVEDRAFT_v1g225836 [Nematostella vectensis]
gi|156195550|gb|EDO25635.1| predicted protein [Nematostella vectensis]
Length = 154
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSI 190
L+ LG++++ L+G+LG V+GM+ F I + N V GI E+LI+ GL V+I
Sbjct: 52 LTALGTIAAITPLLGLLGTVIGMIKVFTEIMAQGTGNASVLAGGISEALITTAAGLAVAI 111
Query: 191 PSSIAYNKFIEDSKKFAMQME 211
P+ I + F ++ME
Sbjct: 112 PTLIFHRHFQRKIDSLVVEME 132
>gi|149921283|ref|ZP_01909738.1| MotA/TolQ/ExbB proton channel family domain protein [Plesiocystis
pacifica SIR-1]
gi|149817830|gb|EDM77293.1| MotA/TolQ/ExbB proton channel family domain protein [Plesiocystis
pacifica SIR-1]
Length = 229
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 53/95 (55%), Gaps = 6/95 (6%)
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVS----IPGIIE 177
RE+ + + + +G+++S L+G+LG V+GM+ FQ Y+N + GI
Sbjct: 101 GREVAHLDKNVEIIGTVASITPLLGLLGTVVGMIQVFQRFVDAYANGQATPDVFAEGIWT 160
Query: 178 SLISILLGLCVSIPSSIAYNKFIED-SKKFAMQME 211
+LI+ GL V+IP + Y KF++ + + ++ME
Sbjct: 161 ALITTAYGLMVAIPMLVLY-KFVQGRNDRLIVEME 194
>gi|118579677|ref|YP_900927.1| MotA/TolQ/ExbB proton channel [Pelobacter propionicus DSM 2379]
gi|118502387|gb|ABK98869.1| outer membrane transport energization protein ExbB [Pelobacter
propionicus DSM 2379]
Length = 147
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 51/92 (55%), Gaps = 4/92 (4%)
Query: 123 RELE-EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA--GYYSNNVVSIPGIIESL 179
R LE E+T KL + ++ S +G+LG V+G+M F ++ G+ N + + G+ +L
Sbjct: 46 RALELELTRKLHVIATIGSNAPYLGLLGTVMGIMLTFHTMGTEGFMDTNKIMV-GLALAL 104
Query: 180 ISILLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
+ +GL V+IPS YN + +K +Q E
Sbjct: 105 KATAVGLFVAIPSVTLYNLLLRRTKVLLIQWE 136
>gi|295135758|ref|YP_003586434.1| MotA/TolQ/ExbB family biopolymer transport protein [Zunongwangia
profunda SM-A87]
gi|294983773|gb|ADF54238.1| MotA/TolQ/ExbB family biopolymer transport protein [Zunongwangia
profunda SM-A87]
Length = 233
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 105/229 (45%), Gaps = 39/229 (17%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+SIF L + G+A + II +LF+ +L +V I FE+LF +++
Sbjct: 26 LSIFDLLLSGGIAGQIIIFVLFV--LLFAAVYIY--------------FERLF----AIK 65
Query: 71 TVCKSLKNH-HNIG---LAAIFMSAMSEWKKSCDKGAR----------SPIGIQDRIDRM 116
+ + KN H I L SA +S + AR SP+ + I+
Sbjct: 66 SASQVDKNFMHQIKDSVLNGNIESAKIRCAQSDNPVARLTEKGISRIGSPL---EDINTA 122
Query: 117 MDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI--PG 174
++ A E+ ++ + +S L +++ A ++G LG V+GM+ F +A + + G
Sbjct: 123 IENAGRLEVYKLEKNVSILATIAGAAPMIGFLGTVIGMVIAFHELATSSGQAQMGLLAEG 182
Query: 175 IIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
I ++ + + GL V I + I YN + + K QME A +F +L+
Sbjct: 183 IYTAMTTTVAGLIVGIIAYIGYNHLVVKTDKVVHQMEATAVDFLDLLNE 231
>gi|77166131|ref|YP_344656.1| MotA/TolQ/ExbB proton channel [Nitrosococcus oceani ATCC 19707]
gi|254435037|ref|ZP_05048544.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Nitrosococcus oceani AFC27]
gi|76884445|gb|ABA59126.1| MotA/TolQ/ExbB proton channel [Nitrosococcus oceani ATCC 19707]
gi|207088148|gb|EDZ65420.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Nitrosococcus oceani AFC27]
Length = 253
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI-AGYYSNNVVSIPGIIESLISILLG 185
E+ L+ LG++++ L+G+LG V+GM+ F I A N V GI E+LI+ G
Sbjct: 122 ELERFLNTLGTIAAITPLLGLLGTVIGMIKVFTVITAQGVDNPAVLAGGISEALITTAAG 181
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQME 211
L V+IPS + Y F + + ME
Sbjct: 182 LAVAIPSLMFYRYFHGRVMRLVVDME 207
>gi|307246492|ref|ZP_07528564.1| Biopolymer transport ExbB protein [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|306852555|gb|EFM84788.1| Biopolymer transport ExbB protein [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
Length = 222
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 95/207 (45%), Gaps = 7/207 (3%)
Query: 16 LFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKS 75
L Q + + +L SILSWS+I+ + + I +++ + S +++ K
Sbjct: 6 LIKQQDIVLSVSFFILVFMSILSWSIILIRLIKIIGVKKNNQVTFNRIKSDENMNQAKKY 65
Query: 76 LKNHHNIGLAAIFMSAMSE---WKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKL 132
+N + ++ I +A + ++ + + +D + + AI + L + L
Sbjct: 66 TQNKRS-DISEILQTAFKQCELYQLNGKYNLSHQLPFKDFLTLHLRNAITQSLRKYDGGL 124
Query: 133 SFLGSMSSAGLLVGILGAVLGMMGFFQSIA--GYYSNNVVSIPGIIESLISILLGLCVSI 190
L S+ + +G+ G V G+ I+ G S VS P I E+L++ +GL V+I
Sbjct: 125 VALASIGAVAPFIGLFGTVWGIFNALMDISQQGQVSIATVSAP-IGEALVATAMGLFVAI 183
Query: 191 PSSIAYNKFIEDSKKFAMQMEGFANEF 217
P+ +AYN ++ + ++ +ANE
Sbjct: 184 PAVLAYNLIARLNRNLSQDLDHYANEL 210
>gi|42522992|ref|NP_968372.1| adventurous gliding motility protein R [Bdellovibrio bacteriovorus
HD100]
gi|39575197|emb|CAE79365.1| Adventurous gliding motility protein R [Bdellovibrio bacteriovorus
HD100]
Length = 236
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 70/142 (49%), Gaps = 14/142 (9%)
Query: 93 SEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVL 152
S +K +K R D I + D+A++ + T++L +L +++ L+G+LG +
Sbjct: 77 SAFKTILEKADRD----DDTIFQAHDIALSENVPLYTKRLHYLSMLANVATLLGLLGTIH 132
Query: 153 GMMGFFQSIAG--YYSNNVVSIPGIIESLISILLGLCVSIPSSIAY-------NKFIED- 202
G++ FQ++A + GI S+ + LGL V+IP+ + + N+ IED
Sbjct: 133 GLILSFQAVASADPAQKQALLAHGISVSMYTTALGLAVAIPAMVFFSILTARQNELIEDM 192
Query: 203 SKKFAMQMEGFANEFSAILSRQ 224
S+K + E + L+RQ
Sbjct: 193 SEKCSKLTELLTSAHIPNLTRQ 214
>gi|261415312|ref|YP_003248995.1| MotA/TolQ/ExbB proton channel [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|261371768|gb|ACX74513.1| MotA/TolQ/ExbB proton channel [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|302325673|gb|ADL24874.1| MotA/TolQ/ExbB proton channel family protein [Fibrobacter
succinogenes subsp. succinogenes S85]
Length = 535
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 54/102 (52%), Gaps = 1/102 (0%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
++ +R + A+ RE ++ ++ L +M + L+G+LG V G++ F I +N+
Sbjct: 417 RENAERSLQEALLREQPKLERRMGLLAAMGTIAPLLGLLGTVTGIITLFTVITEVGTNDA 476
Query: 170 -VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQM 210
V GI E+L++ +GL ++IP I + E +K ++
Sbjct: 477 RVLAGGISEALVTTEMGLVIAIPVMILHGLLSEKIEKITSEL 518
>gi|109898595|ref|YP_661850.1| MotA/TolQ/ExbB proton channel [Pseudoalteromonas atlantica T6c]
gi|109700876|gb|ABG40796.1| outer membrane transport energization protein ExbB
[Pseudoalteromonas atlantica T6c]
Length = 233
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 101/211 (47%), Gaps = 19/211 (9%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQFRE-FEQLF---WSGQSLETVCKSLKNHHN 81
++ LL S+++ SV + K+ F + R + + EQ F G+ + + L N
Sbjct: 10 VVVWLLISLSVVALSVGVFKAWQFYSTRPKPADAIEQAFGFLQQGKHAQALL--LVNGQR 67
Query: 82 IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSA 141
AA+ S + + DK + + I+D I R +AIA ++ L L +++
Sbjct: 68 NYRAALISSTV----QLIDKSSLALDDIKDEIYRQAQLAIA----QLNSYLRVLEVIATL 119
Query: 142 GLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKF 199
L+G+ G V+GM+ F+++ AG N V GI ++L++ +GL V+IP S+ N +
Sbjct: 120 APLMGLFGTVIGMIEAFKAMESAGAQVNPAVLSGGIWQALLTTAVGLAVAIPVSM-LNSY 178
Query: 200 IEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
E +K ++ + N+ + + N S
Sbjct: 179 FE--RKAEVESQAIQNDLQRVFTIYASANSS 207
>gi|167571243|ref|ZP_02364117.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Burkholderia oklahomensis C6786]
Length = 132
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 56/112 (50%), Gaps = 6/112 (5%)
Query: 111 DRIDRMMDVAIARELEEITEKLSF----LGSMSSAGLLVGILGAVLGMMGFFQSIAGYYS 166
+R +R++ A+ L +L F L S+ S VG+LG V G+ SIA
Sbjct: 6 ERGERVLR-ALRHALRTSQRRLEFGQVLLASIGSTAPFVGLLGTVWGIYHALGSIAASGQ 64
Query: 167 NNVVSIPGII-ESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEF 217
+ ++ G + E+LI GL V+IP+ +AYN ++ +++GFA +
Sbjct: 65 AQIENVAGPVGEALIMTAFGLVVAIPAVLAYNILGRLVRQLVEELDGFARDL 116
>gi|296272179|ref|YP_003654810.1| MotA/TolQ/ExbB proton channel [Arcobacter nitrofigilis DSM 7299]
gi|296096354|gb|ADG92304.1| MotA/TolQ/ExbB proton channel [Arcobacter nitrofigilis DSM 7299]
Length = 158
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 60/110 (54%), Gaps = 11/110 (10%)
Query: 96 KKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMM 155
K + K R+ + ++ + + I E++++ L+++ +++S L+G+LG V G+
Sbjct: 38 KNAMVKNIRNKVNTENALT--IYAQIEYEVKKLETGLTYIKNIASIAPLLGLLGTVYGVF 95
Query: 156 GFFQSIAGYYSNNVVSIP-----GIIESLISILLGLCVSIPSSIAYNKFI 200
F++I + N + P GI +LI+ + GL V+IP IAYN FI
Sbjct: 96 KSFEAI----TKNGLGDPSIFSNGISIALITTIAGLIVAIPHHIAYNHFI 141
>gi|198282784|ref|YP_002219105.1| MotA/TolQ/ExbB proton channel [Acidithiobacillus ferrooxidans ATCC
53993]
gi|218667894|ref|YP_002424981.1| MotA/TolQ/ExbB proton channel family protein [Acidithiobacillus
ferrooxidans ATCC 23270]
gi|198247305|gb|ACH82898.1| MotA/TolQ/ExbB proton channel [Acidithiobacillus ferrooxidans ATCC
53993]
gi|218520107|gb|ACK80693.1| MotA/TolQ/ExbB proton channel family protein [Acidithiobacillus
ferrooxidans ATCC 23270]
Length = 206
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 123 RELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLIS 181
E+ + L+FLGS++ L+G+LG V G+M F +I + + ++ GI E+LI+
Sbjct: 101 HEVAHLDRYLNFLGSIAGVAPLLGLLGTVFGIMHAFAAIGMVGAGDPKALASGIAEALIT 160
Query: 182 ILLGLCVSIPSSIAYNKF 199
GL V+IPS + Y F
Sbjct: 161 TASGLIVAIPSLMFYRYF 178
>gi|156312541|ref|XP_001617847.1| hypothetical protein NEMVEDRAFT_v1g225742 [Nematostella vectensis]
gi|156196113|gb|EDO25747.1| predicted protein [Nematostella vectensis]
Length = 278
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 59/104 (56%), Gaps = 3/104 (2%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI 172
I + ++ A A EL + + + F+ +++S L+G+ G VLGM+ F ++A + + ++
Sbjct: 164 IQKEIEEATALELPILEKNMVFISTIASVATLIGLFGTVLGMIRAFSAMAEAGAPDGAAL 223
Query: 173 -PGIIESLISILLGLCVSIPSSIAYNKF--IEDSKKFAMQMEGF 213
GI E+LI+ LG+ S + IAYN + I D+ F + GF
Sbjct: 224 AAGISEALINTALGIGTSAIAIIAYNFYTTIIDNITFGIDESGF 267
>gi|300311922|ref|YP_003776014.1| biopolymer transport protein [Herbaspirillum seropedicae SmR1]
gi|300074707|gb|ADJ64106.1| biopolymer transport protein [Herbaspirillum seropedicae SmR1]
Length = 241
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 51/96 (53%), Gaps = 1/96 (1%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI 172
+DR +D AI R + E+ L LG+ + G L+G+LG ++G+ F + S++
Sbjct: 95 MDRYIDEAIVRTMPELDRALWLLGAAITLGPLIGLLGTIIGITESFNVLGTAGSSSGAVT 154
Query: 173 PGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAM 208
GI SL++ GL V+I + +A N + + A+
Sbjct: 155 NGIGHSLLATGCGLLVAI-AGVAANSYFSKRVRLAL 189
>gi|255323307|ref|ZP_05364441.1| biopolymer transport ExbB protein [Campylobacter showae RM3277]
gi|255299599|gb|EET78882.1| biopolymer transport ExbB protein [Campylobacter showae RM3277]
Length = 209
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 86/173 (49%), Gaps = 21/173 (12%)
Query: 31 LFIFSILSWSVIIQKSVNF----ITLRRQFR-EFEQLFWSGQ--SLETVCKSLKNHHNIG 83
+F S+L +V+++K F I F+ + L G ++ CK KN ++
Sbjct: 15 IFCLSVLGIAVLLEKGAYFLFTEIDATSSFKIKLCNLILEGDYAKIKEFCKGYKN--SLA 72
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
A+F++ ++ +GA + +ID + + A++ +L + + LG +SA
Sbjct: 73 KTALFVA------ENLGEGAS-----KTQIDYIAEEAVSMQLTSLERRTWILGLCASASP 121
Query: 144 LVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAY 196
+G+LG ++GM+ F ++G +V++ GI E+L + GL V+IP I +
Sbjct: 122 QLGLLGTIVGMIKAFSGLSGGVDAPLVAV-GISEALYTTAFGLIVAIPCVIFF 173
>gi|258647071|ref|ZP_05734540.1| MotA/TolQ/ExbB proton channel family protein [Prevotella tannerae
ATCC 51259]
gi|260853189|gb|EEX73058.1| MotA/TolQ/ExbB proton channel family protein [Prevotella tannerae
ATCC 51259]
Length = 289
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 57/107 (53%), Gaps = 5/107 (4%)
Query: 112 RIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA--GYYSNNV 169
I + ++ A A E+ + E L +G++ + G L+G+LG VLGM+ F ++ G ++
Sbjct: 175 NIQKSLEEATALEMPMLQENLPIIGTIVTLGTLMGLLGTVLGMIRSFSAMGAEGGADSSA 234
Query: 170 VSIPGIIESLISILLGLCVSIPSSIAYNKFIE--DSKKFAMQMEGFA 214
+S GI E+L++ G+ + I YN F D FA+ GF+
Sbjct: 235 LST-GISEALVNTASGIATGALAVITYNYFTNKIDRLTFALDEVGFS 280
>gi|15837681|ref|NP_298369.1| hypothetical protein XF1079 [Xylella fastidiosa 9a5c]
gi|28198276|ref|NP_778590.1| biopolymer transport protein [Xylella fastidiosa Temecula1]
gi|71275594|ref|ZP_00651879.1| MotA/TolQ/ExbB proton channel [Xylella fastidiosa Dixon]
gi|71899491|ref|ZP_00681648.1| MotA/TolQ/ExbB proton channel [Xylella fastidiosa Ann-1]
gi|170729598|ref|YP_001775031.1| biopolymer transport protein [Xylella fastidiosa M12]
gi|182680913|ref|YP_001829073.1| MotA/TolQ/ExbB proton channel [Xylella fastidiosa M23]
gi|9106029|gb|AAF83889.1|AE003944_6 conserved hypothetical protein [Xylella fastidiosa 9a5c]
gi|28056346|gb|AAO28239.1| biopolymer transport protein [Xylella fastidiosa Temecula1]
gi|71163485|gb|EAO13202.1| MotA/TolQ/ExbB proton channel [Xylella fastidiosa Dixon]
gi|71730711|gb|EAO32785.1| MotA/TolQ/ExbB proton channel [Xylella fastidiosa Ann-1]
gi|167964391|gb|ACA11401.1| biopolymer transport protein [Xylella fastidiosa M12]
gi|182631023|gb|ACB91799.1| MotA/TolQ/ExbB proton channel [Xylella fastidiosa M23]
gi|307579381|gb|ADN63350.1| biopolymer transport protein [Xylella fastidiosa subsp. fastidiosa
GB514]
Length = 220
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 58/105 (55%), Gaps = 7/105 (6%)
Query: 109 IQDRIDRMMDVAIARELEEITEK-LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSN 167
I++RI+ R L E+ L+ LG+++SAG L+G+LG V+GM+ F I Y
Sbjct: 88 IRERIE-----DTGRHLVHRMERFLNALGTIASAGPLLGLLGTVVGMIQMFLGILDYGVG 142
Query: 168 NVVSIP-GIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
+V + GI ++L+ G+ ++IP+ I + F + ++ME
Sbjct: 143 DVNQLAGGIGKALVCTATGMIIAIPALIFHRYFKGRITGYVIEME 187
>gi|167948429|ref|ZP_02535503.1| MotA/TolQ/ExbB proton channel [Endoriftia persephone
'Hot96_1+Hot96_2']
Length = 221
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 59/102 (57%), Gaps = 3/102 (2%)
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILL 184
E+ L+ LG+++S L+G+LG V+GM+ F +I AG + +++ GI E+LI+
Sbjct: 117 ELERYLNTLGTIASITPLLGLLGTVIGMIKVFGAIVTAGVGNPGILA-GGISEALITTAT 175
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
GL V+IPS + + F+ +K + ME A + ++ + E
Sbjct: 176 GLSVAIPSLMFHRYFMGLVEKLVVAMEEQALKLIEVIHGERE 217
>gi|149370018|ref|ZP_01889869.1| putative biopolymer transport protein [unidentified eubacterium
SCB49]
gi|149356509|gb|EDM45065.1| putative biopolymer transport protein [unidentified eubacterium
SCB49]
Length = 232
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 63/121 (52%), Gaps = 5/121 (4%)
Query: 105 SPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGY 164
SP+ + I+ ++ A E+ ++ + +S L +++ A ++G LG V+GM+ F ++A
Sbjct: 113 SPL---EDINTAIENAGRLEVYKLEKNVSVLATIAGAAPMIGFLGTVIGMVLAFHTLATS 169
Query: 165 YSNNVVSI--PGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
+ + GI ++ + + GL V I + I YN + + K QME A +F +L+
Sbjct: 170 SGQAEMGLLAEGIYTAMTTTVAGLIVGIIAYIGYNHLVVKTDKIVHQMEATAVDFLDLLN 229
Query: 223 R 223
Sbjct: 230 E 230
>gi|305664635|ref|YP_003860922.1| putative biopolymer transport protein [Maribacter sp. HTCC2170]
gi|88708652|gb|EAR00888.1| putative biopolymer transport protein [Maribacter sp. HTCC2170]
Length = 230
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 58/115 (50%), Gaps = 2/115 (1%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA--GYYSNN 168
D I+ ++ A E+ ++ +S L +++ A ++G LG V+GM+ F +A G +
Sbjct: 114 DDINTAIENAGTLEVYKLERNVSVLATVAGAAPMIGFLGTVIGMILAFHEMATSGGQAEM 173
Query: 169 VVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
GI ++ + + GL V I + I YN + + K +ME A EF +L+
Sbjct: 174 GSLASGIYTAMTTTVAGLIVGIIAYIGYNHLVNRTDKVVHKMEANAVEFLDLLNE 228
>gi|71899426|ref|ZP_00681585.1| MotA/TolQ/ExbB proton channel [Xylella fastidiosa Ann-1]
gi|71730835|gb|EAO32907.1| MotA/TolQ/ExbB proton channel [Xylella fastidiosa Ann-1]
Length = 220
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 58/105 (55%), Gaps = 7/105 (6%)
Query: 109 IQDRIDRMMDVAIARELEEITEK-LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSN 167
I++RI+ R L E+ L+ LG+++SAG L+G+LG V+GM+ F I Y
Sbjct: 88 IRERIE-----DTGRHLVHRMERFLNALGTIASAGPLLGLLGTVVGMIQMFLGILDYGVG 142
Query: 168 NVVSIP-GIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
+V + GI ++L+ G+ ++IP+ I + F + ++ME
Sbjct: 143 DVNQLAGGIGKALVCTATGMIIAIPALIFHRYFKGRIAGYVIEME 187
>gi|167721229|ref|ZP_02404465.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Burkholderia pseudomallei DM98]
Length = 131
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 56/112 (50%), Gaps = 6/112 (5%)
Query: 111 DRIDRMMDVAIARELEEITEKLSF----LGSMSSAGLLVGILGAVLGMMGFFQSIAGYYS 166
+R +R++ A+ L +L F L S+ S VG+LG V G+ SIA
Sbjct: 1 ERGERVLR-ALRHALRASQRRLEFGQVLLASIGSTAPFVGLLGTVWGIYHALGSIAASGQ 59
Query: 167 NNVVSIPGII-ESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEF 217
+ ++ G + E+LI GL V+IP+ +AYN ++ +++GFA +
Sbjct: 60 AQIENVAGPVGEALIMTAFGLVVAIPAVLAYNILGRLVRQLVEELDGFARDL 111
>gi|330982827|gb|EGH80930.1| biopolymer transport protein ExbB [Pseudomonas syringae pv. aptata
str. DSM 50252]
Length = 119
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 60/121 (49%), Gaps = 11/121 (9%)
Query: 24 VKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCK-------SL 76
V ++ L +FS+LSW++++ KS ++ + Q ++F ++FWS L T + +L
Sbjct: 3 VPAVLWALILFSVLSWALLLIKSAQYVRQKSQNKQFTKVFWSAPDLLTAAEHSAQYPGAL 62
Query: 77 KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLG 136
N G A+ A+ E ++ + A + I DR++R + I +E + + L
Sbjct: 63 ARIANSGFEAM---AVDESPRTTQQLAHT-INRSDRLERNLRQQIQKERRALESGQAILA 118
Query: 137 S 137
S
Sbjct: 119 S 119
>gi|323140575|ref|ZP_08075500.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Phascolarctobacterium sp. YIT 12067]
gi|322414928|gb|EFY05722.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Phascolarctobacterium sp. YIT 12067]
Length = 213
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 54/100 (54%), Gaps = 5/100 (5%)
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISILLG 185
++ KL +L + + L+G+LG ++GM+G F SI S ++I GI E+LI+ G
Sbjct: 114 KLKNKLDYLAIIVTMSPLLGLLGTIVGMIGAF-SIFNLESGAPIAITGGIGEALIATATG 172
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
LCV+I S A++ F ME FSA+L +T
Sbjct: 173 LCVAILSLCAHSYFAHRMDNMITDME---QCFSALLEAET 209
>gi|292493724|ref|YP_003529163.1| MotA/TolQ/ExbB proton channel [Nitrosococcus halophilus Nc4]
gi|291582319|gb|ADE16776.1| MotA/TolQ/ExbB proton channel [Nitrosococcus halophilus Nc4]
Length = 477
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 61/112 (54%), Gaps = 6/112 (5%)
Query: 117 MDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA--GYYSNNVVSIPG 174
+D AI +E+ + L L +++ L+G+LG V GM+ FQSI G ++S G
Sbjct: 357 LDEAILKEIPRLERGLPTLAILAAIPPLLGLLGTVTGMIETFQSITLFGTGDPKLMS-GG 415
Query: 175 IIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
I E+L++ LGL V+IP + ++ S + ++ E +AI++++ E
Sbjct: 416 ISEALVTTELGLSVAIPILLIHSGLSSKSNRLVQVLD---EESAAIVAQRAE 464
>gi|83645477|ref|YP_433912.1| biopolymer transport protein [Hahella chejuensis KCTC 2396]
gi|83633520|gb|ABC29487.1| Biopolymer transport protein [Hahella chejuensis KCTC 2396]
Length = 211
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 51/88 (57%), Gaps = 1/88 (1%)
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISIL 183
+ E+ L+ LGS+++ L+G+LG V+GM+ F I + N ++ GI ++LI+
Sbjct: 100 VHELERFLTALGSVAAITPLLGLLGTVIGMIDVFAEIQIAGTGNTQALAGGISKALITTA 159
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQME 211
+GL ++IP+ + + F + ++ME
Sbjct: 160 VGLTIAIPALVCHRYFQRRVDELVVEME 187
>gi|37520710|ref|NP_924087.1| tolQ-type transport protein [Gloeobacter violaceus PCC 7421]
gi|35211705|dbj|BAC89082.1| gll1141 [Gloeobacter violaceus PCC 7421]
Length = 220
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 51/90 (56%), Gaps = 4/90 (4%)
Query: 112 RIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA--GYYSNNV 169
+ ++ D+ I + + + L+ LG++ + +G+LG V+G++ FQ+ A G SN +
Sbjct: 93 KFEQAFDITINLGMRKFEKHLNVLGTIGAVAPFIGLLGTVVGILRSFQTFAGEGATSNKL 152
Query: 170 VSIPGIIESLISILLGLCVSIPSSIAYNKF 199
+ G +LI+ GL V+I S +AYN F
Sbjct: 153 AAEIGF--ALIATAAGLIVAIASVVAYNIF 180
>gi|254522202|ref|ZP_05134257.1| biopolymer transport protein [Stenotrophomonas sp. SKA14]
gi|219719793|gb|EED38318.1| biopolymer transport protein [Stenotrophomonas sp. SKA14]
Length = 220
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 65/116 (56%), Gaps = 8/116 (6%)
Query: 110 QDRI-DRMMDVAIARELEEITEK-LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSN 167
+D+I +R+ D R L E+ L+ LG+++SAG L+G+LG V+GM+ F I +
Sbjct: 85 RDQIRERIEDTG--RHLVHRMERFLNALGTIASAGPLLGLLGTVIGMIQMFLGILDHGVG 142
Query: 168 NVVSIP-GIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
+V + GI ++L+ G+ V+IP+ + + F + ++ME E SA+L
Sbjct: 143 DVNQLAGGIGKALVCTATGMIVAIPALMFHRYFKGRIHGYVVEME---QEASALLD 195
>gi|89095500|ref|ZP_01168408.1| MotA/TolQ/ExbB proton channel [Oceanospirillum sp. MED92]
gi|89080247|gb|EAR59511.1| MotA/TolQ/ExbB proton channel [Oceanospirillum sp. MED92]
Length = 460
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 52/82 (63%), Gaps = 1/82 (1%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGY-YSNNV 169
++++ +D +I +E+ +I S + +++ L+G+LG V+GM+ FQSI + S+
Sbjct: 330 EQLELKVDESILKEVPKIERGQSIIKLLAAVAPLLGLLGTVIGMIATFQSITLFGTSDPK 389
Query: 170 VSIPGIIESLISILLGLCVSIP 191
+ GI ++L++ +LGL V+IP
Sbjct: 390 LMAGGISQALMTTVLGLVVAIP 411
>gi|190573628|ref|YP_001971473.1| putative biopolymer transport protein [Stenotrophomonas maltophilia
K279a]
gi|190011550|emb|CAQ45169.1| putative biopolymer transport protein [Stenotrophomonas maltophilia
K279a]
Length = 220
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 65/116 (56%), Gaps = 8/116 (6%)
Query: 110 QDRI-DRMMDVAIARELEEITEK-LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSN 167
+D+I +R+ D R L E+ L+ LG+++SAG L+G+LG V+GM+ F I +
Sbjct: 85 RDQIRERIEDTG--RHLVHRMERFLNALGTIASAGPLLGLLGTVIGMIQMFLGILDHGVG 142
Query: 168 NVVSIP-GIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
+V + GI ++L+ G+ V+IP+ + + F + ++ME E SA+L
Sbjct: 143 DVNQLAGGIGKALVCTATGMIVAIPALMFHRYFKGRIHGYVVEME---QEASALLD 195
>gi|126667251|ref|ZP_01738224.1| Biopolymer transport protein [Marinobacter sp. ELB17]
gi|126628196|gb|EAZ98820.1| Biopolymer transport protein [Marinobacter sp. ELB17]
Length = 208
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISILLGLCVSI 190
L+ LG++++ L+G+LG V+GM+ F I N ++ GI E+LI+ GL V+I
Sbjct: 107 LNPLGTVATITPLLGLLGTVIGMIKVFAEIQLAGVGNAGNLAGGISEALITTASGLSVAI 166
Query: 191 PSSIAYNKFIEDSKKFAMQME 211
P+ IA+ FI + ME
Sbjct: 167 PALIAHRYFIRRVDALVINME 187
>gi|330974710|gb|EGH74776.1| biopolymer transport protein ExbB [Pseudomonas syringae pv. aceris
str. M302273PT]
Length = 126
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 59/121 (48%), Gaps = 11/121 (9%)
Query: 24 VKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCK-------SL 76
V ++ L +FS+LSW++++ KS ++ + Q ++F + FWS L T + +L
Sbjct: 10 VPAVLWALILFSVLSWALLLIKSAQYVRQKSQNKQFTKAFWSAPDLLTAAEHSAQYPGAL 69
Query: 77 KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLG 136
N G A+ A+ E ++ + A + I DR++R + I +E + + L
Sbjct: 70 ARIANSGFEAM---AVDESPRTTQQLAHT-INRSDRLERNLRQQIQKERRALESGQAILA 125
Query: 137 S 137
S
Sbjct: 126 S 126
>gi|259418407|ref|ZP_05742325.1| MotA/TolQ/ExbB proton channel [Silicibacter sp. TrichCH4B]
gi|259345802|gb|EEW57646.1| MotA/TolQ/ExbB proton channel [Silicibacter sp. TrichCH4B]
Length = 321
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 123 RELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLI 180
REL L L +S+ L+G+LG V+GM+ FQ++ AG ++ + GI E+L+
Sbjct: 211 RELGSARSGLGALELISTIAPLLGLLGTVMGMIAAFQALQAAGSKADPAMLAGGIWEALL 270
Query: 181 SILLGLCVSIPSSIAYNKF 199
+ G+ V+IP+S A F
Sbjct: 271 TTAAGMAVAIPASAALTWF 289
>gi|260886997|ref|ZP_05898260.1| MotA/TolQ/ExbB proton channel family protein [Selenomonas sputigena
ATCC 35185]
gi|330839219|ref|YP_004413799.1| MotA/TolQ/ExbB proton channel [Selenomonas sputigena ATCC 35185]
gi|260863059|gb|EEX77559.1| MotA/TolQ/ExbB proton channel family protein [Selenomonas sputigena
ATCC 35185]
gi|329746983|gb|AEC00340.1| MotA/TolQ/ExbB proton channel [Selenomonas sputigena ATCC 35185]
Length = 212
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 85/189 (44%), Gaps = 18/189 (9%)
Query: 27 IITLLFIFSILSWSVIIQKSVNF--ITLRRQF-REFEQLFWSGQSLETVCKSLKNHHNIG 83
I+ +L + SI ++ I++++ F + R F REF Q + + L H
Sbjct: 17 IMYVLLLCSIFVVTIGIERAMYFSRMDTGRAFTREFYQCMANDDFAGA--RKLAEDHRGA 74
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
LA I AM KK R+ M++ L ++ ++L +L + +
Sbjct: 75 LANILFGAMKLVKKD-----------SSRVSSYMEIQSGIVLSKLRKRLYYLSVIVTMAP 123
Query: 144 LVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISILLGLCVSIPSSIAYNKFIED 202
L+G+LG + GM+ F S+ S +I G+ E+LI+ +GLCV+I + + F +
Sbjct: 124 LLGLLGTISGMISAF-SVFNLQSGQATAITGGVGEALIATAMGLCVAIIALSVHAYFTQR 182
Query: 203 SKKFAMQME 211
+ ME
Sbjct: 183 IESIVTDME 191
>gi|195952777|ref|YP_002121067.1| MotA/TolQ/ExbB proton channel [Hydrogenobaculum sp. Y04AAS1]
gi|195932389|gb|ACG57089.1| MotA/TolQ/ExbB proton channel [Hydrogenobaculum sp. Y04AAS1]
Length = 151
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 48/93 (51%), Gaps = 4/93 (4%)
Query: 123 RELE---EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIES 178
+ELE + +L L + + +G+ G VLG++ F + V V + GI ++
Sbjct: 50 KELELRIALDRRLGILATFGNNAPFIGLFGTVLGVIKAFNDLGNSSQFGVKVVMEGISQA 109
Query: 179 LISILLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
L+S +GL V+IPS +AYN F+ K + E
Sbjct: 110 LVSTAMGLFVAIPSVVAYNYFVRKMKYLVLLHE 142
>gi|182414163|ref|YP_001819229.1| MotA/TolQ/ExbB proton channel [Opitutus terrae PB90-1]
gi|177841377|gb|ACB75629.1| MotA/TolQ/ExbB proton channel [Opitutus terrae PB90-1]
Length = 221
Score = 45.4 bits (106), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 60/110 (54%), Gaps = 2/110 (1%)
Query: 120 AIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIES 178
A +EL + ++ L ++ +A L+G+LG V GMM F S+ G S+ +I G+ E+
Sbjct: 109 ASGQELARFGQGMATLDTVITAAPLLGLLGTVTGMMRTFGSMTGDISSAAANITGGVAEA 168
Query: 179 LISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
LI+ GL +++ + + YN +++ ++ +N IL +++E N
Sbjct: 169 LIATACGLAIAVTALMPYNYLNARAEEAKHEVADASNALE-ILIKKSESN 217
>gi|282892410|ref|ZP_06300760.1| hypothetical protein pah_c253o034 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|281497812|gb|EFB40173.1| hypothetical protein pah_c253o034 [Parachlamydia acanthamoebae str.
Hall's coccus]
Length = 218
Score = 45.4 bits (106), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 62/120 (51%), Gaps = 3/120 (2%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSN 167
+D+I+ M+++ E+ + + L ++ L+G+LG VLG + F + +G
Sbjct: 95 KDQIENAMEISGLIEIAHLEKNAKILSIIAHIAPLIGLLGTVLGFIQAFSEMRMSGLVDI 154
Query: 168 NVVSIPGIIE-SLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+ I +E +L++ GL V+IP +AYN + + F ++++ + E ++L Q E
Sbjct: 155 SATRIGEAMEYALVTTAAGLVVAIPCVLAYNYIVSRVEGFVLEIQTTSAEIVSLLMDQKE 214
>gi|77919985|ref|YP_357800.1| biopolymer transport protein [Pelobacter carbinolicus DSM 2380]
gi|77546068|gb|ABA89630.1| outer membrane transport energization protein ExbB [Pelobacter
carbinolicus DSM 2380]
Length = 234
Score = 45.4 bits (106), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 2/77 (2%)
Query: 123 RELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA--GYYSNNVVSIPGIIESLI 180
RE+ + L L +SS L+G+LG V GM+ FQ+I G ++ V GI E+++
Sbjct: 106 REVRRMERFLPTLFLISSISPLLGLLGTVAGMIKAFQAIENLGGKVDSSVLAGGIWEAML 165
Query: 181 SILLGLCVSIPSSIAYN 197
+ LGL V+IP+ +A+N
Sbjct: 166 TTALGLGVAIPAMVAHN 182
>gi|254427139|ref|ZP_05040846.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Alcanivorax sp. DG881]
gi|196193308|gb|EDX88267.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Alcanivorax sp. DG881]
Length = 224
Score = 45.4 bits (106), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 67/129 (51%), Gaps = 22/129 (17%)
Query: 88 FMSAMSEWKKSCDKGAR--SPIGIQDRI------DRMMDVAIARE---------LEEITE 130
++A+ + K+ + + SPI DR+ +R +D A +E L+E+
Sbjct: 54 LLNALRQGKQPGEPAGKLNSPI---DRVLWQCWQNRNLDEAAWQEESLRLARSGLDELRG 110
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGLCV 188
L L +S+ L+G+LG V GM+G FQ++ AG + + GI E+L++ GL V
Sbjct: 111 GLRVLEVISAIAPLLGLLGTVFGMIGAFQALETAGSQVDPSILSGGIWEALLTTAAGLTV 170
Query: 189 SIPSSIAYN 197
+IP+ A++
Sbjct: 171 AIPTLAAFH 179
>gi|307825495|ref|ZP_07655713.1| MotA/TolQ/ExbB proton channel [Methylobacter tundripaludum SV96]
gi|307733381|gb|EFO04240.1| MotA/TolQ/ExbB proton channel [Methylobacter tundripaludum SV96]
Length = 204
Score = 45.4 bits (106), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 123 RELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIE-SLIS 181
R + ++ L+ LG++++ L+G+LG V GM+ F S+ + S N + G I +LI+
Sbjct: 98 RVVHDLERFLNTLGTIAAVSPLLGLLGTVFGMIDIFASLLQHGSGNPAVLAGGISVALIT 157
Query: 182 ILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
GL V+IPS + + F ++ + ME A + IL
Sbjct: 158 TASGLTVAIPSLVFHRYFERLVDEYVVTMEEEALKLVDIL 197
>gi|269302574|gb|ACZ32674.1| tolQ protein-like protein [Chlamydophila pneumoniae LPCoLN]
Length = 232
Score = 45.4 bits (106), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 95/208 (45%), Gaps = 30/208 (14%)
Query: 25 KCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNI-- 82
K I L I S+ +W+V+ QK + ++++F + +G+SL+ +KN H
Sbjct: 21 KSIFFCLLILSVCTWTVLHQK----LAIQKKFLK------AGKSLKDFL--IKNRHAPLS 68
Query: 83 --------GLAAIFMSAMSEWKKSCDKGA-----RSPIGIQDRIDRMMDV--AIARELEE 127
A ++ + + DK R PI + I + + AI + +
Sbjct: 69 LDIHPELSPFADLYFTIKRGTLELLDKNRQSAPDRGPILSSEDIQSLETLLGAIMPKYKA 128
Query: 128 ITEKLSFLGSMS-SAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGL 186
+ K SF+ + + S +G+LG V G++ F I+ S N + G+ +L + ++GL
Sbjct: 129 LLHKNSFIPATTISLAPFLGLLGTVWGILVAFTHISSGSSGNSAIMEGLATALGTTIIGL 188
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFA 214
V+IPS IA+N S + ++E A
Sbjct: 189 FVAIPSLIAFNYLKAHSSELISEIEQTA 216
>gi|120554663|ref|YP_959014.1| MotA/TolQ/ExbB proton channel [Marinobacter aquaeolei VT8]
gi|120324512|gb|ABM18827.1| MotA/TolQ/ExbB proton channel [Marinobacter aquaeolei VT8]
Length = 208
Score = 45.4 bits (106), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 49/88 (55%), Gaps = 1/88 (1%)
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISIL 183
+ E+ L+ LG++++ L+G+LG V+GM+ F I N ++ GI E+LI+
Sbjct: 100 IHELERFLNPLGTIATITPLLGLLGTVIGMIKVFAEIQLAGVGNAGNLAGGISEALITTA 159
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQME 211
GL V+IP+ + + FI + + ME
Sbjct: 160 AGLSVAIPALVCHRYFIRRVDELVVNME 187
>gi|254445763|ref|ZP_05059239.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Verrucomicrobiae bacterium DG1235]
gi|198260071|gb|EDY84379.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Verrucomicrobiae bacterium DG1235]
Length = 231
Score = 45.4 bits (106), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 53/91 (58%), Gaps = 1/91 (1%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI-AGYYSNN 168
++ + + A++ + I++ + +L +++ ++G+LG V GM+G FQ++ AG
Sbjct: 118 REPFETEVGAALSAQENAISQWIHYLSVIANVAPMIGLLGTVSGMIGGFQTMSAGGMGRP 177
Query: 169 VVSIPGIIESLISILLGLCVSIPSSIAYNKF 199
+ I E+LI+ GLC+ IP+ IA++ F
Sbjct: 178 ELFAGDIGEALITTATGLCIGIPAMIAHSYF 208
>gi|331019435|gb|EGH99491.1| biopolymer transport protein ExbB [Pseudomonas syringae pv.
lachrymans str. M302278PT]
Length = 104
Score = 45.4 bits (106), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
Query: 144 LVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCVSIPSSIAYNKFIED 202
+G+ G V G+M QSI S ++ ++ G I +L++ +G+ V++P+ + YN F+
Sbjct: 2 FIGLFGTVWGIMEALQSIGVTGSASLEAVAGPIGHALVATGVGIAVAVPAVLIYNFFLRR 61
Query: 203 SKKFAMQMEGFANEFSAILSR 223
K M+ FA++F A+ R
Sbjct: 62 LKLAVADMDDFAHDFDALAQR 82
>gi|71278525|ref|YP_270633.1| MotA/TolQ/ExbB proton channel family protein [Colwellia
psychrerythraea 34H]
gi|71144265|gb|AAZ24738.1| MotA/TolQ/ExbB proton channel family protein [Colwellia
psychrerythraea 34H]
Length = 457
Score = 45.4 bits (106), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 48/73 (65%), Gaps = 1/73 (1%)
Query: 120 AIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIES 178
+I RE+ +++++L+ + +S L+G+LG V GM+ FQ+I + + + + GI ++
Sbjct: 338 SILREVPKLSKRLTLIKIISVVAPLIGLLGTVTGMINTFQAITLFGTGDPKLMAGGISQA 397
Query: 179 LISILLGLCVSIP 191
L++ +LGL V+IP
Sbjct: 398 LVTTVLGLVVAIP 410
>gi|325526504|gb|EGD04068.1| biopolymer MotA/TolQ/ExbB proton channel family transporter
[Burkholderia sp. TJI49]
Length = 197
Score = 45.4 bits (106), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 56/99 (56%), Gaps = 2/99 (2%)
Query: 120 AIARELE-EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIE 177
AIA+ +E +++ L L ++ +A L+G+LG ++GMM F+ I G N + G+ +
Sbjct: 84 AIAQRIERDMSRGLWLLETIVTAAPLLGLLGTIVGMMHSFRLIGGDGLVNPAGVSGGVAQ 143
Query: 178 SLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANE 216
+L++ +GL +++ + A+N F + +E ANE
Sbjct: 144 ALVATAIGLVIALVALFAFNYFSRRVDRLMDDIELHANE 182
>gi|294783980|ref|ZP_06749302.1| biopolymer transport ExbB protein [Fusobacterium sp. 1_1_41FAA]
gi|294479792|gb|EFG27571.1| biopolymer transport ExbB protein [Fusobacterium sp. 1_1_41FAA]
Length = 202
Score = 45.4 bits (106), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 95/189 (50%), Gaps = 24/189 (12%)
Query: 17 FMQMGLAVKCIITLLFIFSILSWSVIIQK----SVNFITLRRQFREFEQLFWSGQSLE-- 70
++Q+G + ++T I SI +++VI+++ S N + F+E + + ++
Sbjct: 4 YLQVGGPILWVLT---IISIAAFAVILERIAFFSRNEKAVGNTFKEEILSLVANKKIDEA 60
Query: 71 -TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+C S K + SA+ ++ + +KG + +QD + ++ I +E
Sbjct: 61 RNLCASKK--------SCVASAVKKFLEKAEKG----MEVQDYEFILKEITI-QETSPYE 107
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISILLGLCV 188
+L+ L S+ S ++G+LG V GM+ F +I+ Y + + + GI E+L++ GL +
Sbjct: 108 SRLNLLSSIISISPMLGLLGTVTGMIKAFTNISKYGAGDAAIVADGIAEALLTTAAGLMI 167
Query: 189 SIPSSIAYN 197
+IP + YN
Sbjct: 168 AIPVIVVYN 176
>gi|53729226|ref|ZP_00348353.1| COG0811: Biopolymer transport proteins [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|307257645|ref|ZP_07539404.1| Biopolymer transport ExbB protein [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
gi|306863820|gb|EFM95744.1| Biopolymer transport ExbB protein [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
Length = 164
Score = 45.4 bits (106), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 51/100 (51%), Gaps = 3/100 (3%)
Query: 120 AIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA--GYYSNNVVSIPGIIE 177
AI + L + L L S+ + +G+ G V G+ I+ G S VS P I E
Sbjct: 54 AITQSLRKYDGGLVALASIGAVAPFIGLFGTVWGIFNALMDISQQGQVSIATVSAP-IGE 112
Query: 178 SLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEF 217
+L++ +GL V+IP+ +AYN ++ + ++ +ANE
Sbjct: 113 ALVATAMGLFVAIPAVLAYNLIARLNRNLSQDLDHYANEL 152
>gi|303249617|ref|ZP_07335823.1| biopolymer transport ExbB protein [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|307253229|ref|ZP_07535104.1| Biopolymer transport ExbB protein [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|302651550|gb|EFL81700.1| biopolymer transport ExbB protein [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|306859317|gb|EFM91355.1| Biopolymer transport ExbB protein [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
Length = 222
Score = 45.4 bits (106), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 51/100 (51%), Gaps = 3/100 (3%)
Query: 120 AIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA--GYYSNNVVSIPGIIE 177
AI + L + L L S+ + +G+ G V G+ I+ G S VS P I E
Sbjct: 112 AITQSLRKYDGGLVALASIGAVAPFIGLFGTVWGIFNALMDISQQGQVSIATVSAP-IGE 170
Query: 178 SLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEF 217
+L++ +GL V+IP+ +AYN ++ + ++ +ANE
Sbjct: 171 ALVATAMGLFVAIPAVLAYNLIARLNRNLSQDLDHYANEL 210
>gi|237739017|ref|ZP_04569498.1| biopolymer transport exbB protein [Fusobacterium sp. 2_1_31]
gi|229423617|gb|EEO38664.1| biopolymer transport exbB protein [Fusobacterium sp. 2_1_31]
Length = 202
Score = 45.4 bits (106), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 95/189 (50%), Gaps = 24/189 (12%)
Query: 17 FMQMGLAVKCIITLLFIFSILSWSVIIQK----SVNFITLRRQFREFEQLFWSGQSLE-- 70
++Q+G + ++T I SI +++VI+++ S N + F+E + + ++
Sbjct: 4 YLQVGGPILWVLT---IISIAAFAVILERIAFFSRNEKAVGNTFKEEILSLIANKKIDEA 60
Query: 71 -TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+C S K + SA+ ++ + +KG + +QD + ++ I +E
Sbjct: 61 RNLCASKK--------SCVASAVKKFLEKAEKG----MEVQDYEFILKEITI-QETSPYE 107
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISILLGLCV 188
+L+ L S+ S ++G+LG V GM+ F +I+ Y + + + GI E+L++ GL +
Sbjct: 108 SRLNLLSSIISISPMLGLLGTVTGMIKAFTNISKYGAGDAAIVADGIAEALLTTAAGLMI 167
Query: 189 SIPSSIAYN 197
+IP + YN
Sbjct: 168 AIPVIVVYN 176
>gi|121602392|ref|YP_988511.1| putative tonB-system energizer ExbB [Bartonella bacilliformis
KC583]
gi|120614569|gb|ABM45170.1| putative tonB-system energizer ExbB [Bartonella bacilliformis
KC583]
Length = 323
Score = 45.4 bits (106), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 56/117 (47%), Gaps = 1/117 (0%)
Query: 108 GIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSN 167
G+++R+ ++ ++ + + + L ++ + VG+ V G+M F IA +
Sbjct: 195 GVKERVHSLLSRSLLVATQRMAAGNAILATIGAISPFVGLFATVWGIMNSFIGIAKTQTT 254
Query: 168 NV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
+ V PGI E+L++ LGL V+IP+ + YN + + A +LSR
Sbjct: 255 RLDVVAPGIAEALLATALGLFVAIPAVVMYNGLSRALSHYRSDLGNVAAAIERLLSR 311
Score = 39.7 bits (91), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
Query: 7 AIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG 66
A D S +FM VK ++ LL + SI+SW++ K V +R+ R
Sbjct: 17 AAHDFSPLGMFMAADFVVKAVMVLLILASIVSWTIAFAKIVEITLAKRKARRALHSAQQA 76
Query: 67 QSLETVCKSLKNHHNIGLAAIFM 89
Q+L + L+N G + +F+
Sbjct: 77 QTLACLVDQLQNQ--TGASVLFL 97
>gi|42522410|ref|NP_967790.1| adventurous gliding motility protein R [Bdellovibrio bacteriovorus
HD100]
gi|39574942|emb|CAE78783.1| Adventurous gliding motility protein R [Bdellovibrio bacteriovorus
HD100]
Length = 221
Score = 45.4 bits (106), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 86/181 (47%), Gaps = 21/181 (11%)
Query: 27 IITLLFIFSILSWSVIIQKSVNFITLRRQFREF-EQLFW---SGQSLETV--CKSLKNHH 80
++ ++ + +IL+ VII++ + L +EF +Q+F +G + + C +
Sbjct: 23 VMYVIAVIAILALFVIIERMMKLKNLAVDKKEFTDQIFRMVVAGDLRQAISYCDARPAPL 82
Query: 81 NIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSS 140
+ A + AM+ + P + + MD A+ RE+ ++ SFL +
Sbjct: 83 TNTVKAGLVQAMN----------KRP---DEEVQVAMDAAVMREMPKVEGWTSFLAVFGN 129
Query: 141 AGLLVGILGAVLGMMGFFQSIAGY-YSNNVVSI-PGIIESLISILLGLCVSIPSSIAYNK 198
+L G+LG ++GM+G F+++A + + + GI +L GL V+I S +AY
Sbjct: 130 VAVLAGLLGTIIGMIGSFRAVAAADPATKALELSKGISHALNCTAFGLLVAIISIVAYGL 189
Query: 199 F 199
F
Sbjct: 190 F 190
>gi|194365174|ref|YP_002027784.1| MotA/TolQ/ExbB proton channel [Stenotrophomonas maltophilia R551-3]
gi|194347978|gb|ACF51101.1| MotA/TolQ/ExbB proton channel [Stenotrophomonas maltophilia R551-3]
Length = 220
Score = 45.4 bits (106), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 61/111 (54%), Gaps = 7/111 (6%)
Query: 114 DRMMDVAIARELEEITEK-LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI 172
+R+ D R L E+ L+ LG+++SAG L+G+LG V+GM+ F I + +V +
Sbjct: 90 ERIEDTG--RHLVHRMERFLNALGTIASAGPLLGLLGTVIGMIQMFLGILDHGVGDVNQL 147
Query: 173 P-GIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
GI ++L+ G+ V+IP+ + + F + ++ME E SA+L
Sbjct: 148 AGGIGKALVCTATGMIVAIPALMFHRYFKGRIHGYVVEME---QEASALLD 195
>gi|313206421|ref|YP_004045598.1| outer membrane transport energization protein exbb [Riemerella
anatipestifer DSM 15868]
gi|312445737|gb|ADQ82092.1| outer membrane transport energization protein ExbB [Riemerella
anatipestifer DSM 15868]
gi|325336135|gb|ADZ12409.1| ExbD5 [Riemerella anatipestifer RA-GD]
Length = 226
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 53/97 (54%), Gaps = 4/97 (4%)
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGM-MGFFQ--SIAGYYSNNVVSIPGIIESLI 180
E+ ++ + L+ L S S A ++G LG V+GM M FF+ ++ G S +++ GI ++
Sbjct: 123 EVSKLEKNLNLLASASGAAPMLGFLGTVIGMIMAFFEISNVTGAVSPKLLA-SGIYTAMA 181
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEF 217
+ GL V IP+ YN + + ++++ A EF
Sbjct: 182 TTAAGLFVGIPAYFFYNILVTKVDRLVLKIQIHAGEF 218
>gi|309389205|gb|ADO77085.1| MotA/TolQ/ExbB proton channel [Halanaerobium praevalens DSM 2228]
Length = 215
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 58/121 (47%), Gaps = 2/121 (1%)
Query: 104 RSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAG 163
R P ++ +D +L E+ + L FL ++ A +G+LG V GM+ FQ + G
Sbjct: 80 RKPKN-REEFSLYLDAEEVDKLPELEKHLGFLNFIAQAAPTLGLLGTVSGMITTFQ-VLG 137
Query: 164 YYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
N GI E+L + GL +S+P++ Y+ F +K Q+ E ++L +
Sbjct: 138 VGGNPEQMALGISEALFTTAAGLIISLPAAAFYHYFYSRLEKLHNQLNNLRLESESLLFK 197
Query: 224 Q 224
+
Sbjct: 198 E 198
>gi|315023638|gb|EFT36642.1| MotA/TolQ/ExbB family biopolymer transport prote in [Riemerella
anatipestifer RA-YM]
Length = 220
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 53/97 (54%), Gaps = 4/97 (4%)
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGM-MGFFQ--SIAGYYSNNVVSIPGIIESLI 180
E+ ++ + L+ L S S A ++G LG V+GM M FF+ ++ G S +++ GI ++
Sbjct: 117 EVSKLEKNLNLLASASGAAPMLGFLGTVIGMIMAFFEISNVTGAVSPKLLA-SGIYTAMA 175
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEF 217
+ GL V IP+ YN + + ++++ A EF
Sbjct: 176 TTAAGLFVGIPAYFFYNILVTKVDRLVLKIQIHAGEF 212
>gi|302877903|ref|YP_003846467.1| MotA/TolQ/ExbB proton channel [Gallionella capsiferriformans ES-2]
gi|302580692|gb|ADL54703.1| MotA/TolQ/ExbB proton channel [Gallionella capsiferriformans ES-2]
Length = 202
Score = 45.1 bits (105), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 55/108 (50%), Gaps = 3/108 (2%)
Query: 120 AIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESL 179
A + +LE L+ LG+++S L+G+ G V+GM+ F + ++ + GI +L
Sbjct: 98 ATSHDLEHF---LTTLGTIASISPLLGLFGTVVGMIEIFGAQTAAGNSPAILAHGISVAL 154
Query: 180 ISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEG 227
+ GL V+IPS I Y F + ++ME A + I+ Q +G
Sbjct: 155 YNTAFGLIVAIPSMIFYRHFRAKADSLTIEMEQQAIKLVEIVHGQRKG 202
>gi|326560396|gb|EGE10778.1| motA/TolQ/ExbB proton channel [Moraxella catarrhalis 7169]
Length = 182
Score = 45.1 bits (105), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Query: 121 IARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESL 179
IAR E+ + L LG+ +S +G+ G V G+ SI + + G + E+L
Sbjct: 79 IARHRYELEKGLPVLGTTASIAPFIGLFGTVWGIFHALHSIGATGQAGLAQVAGPVGEAL 138
Query: 180 ISILLGLCVSIPSSIAYN 197
I LGL V+IP+ I YN
Sbjct: 139 IMTGLGLAVAIPAVIFYN 156
>gi|257452637|ref|ZP_05617936.1| biopolymer transport exbB protein [Fusobacterium sp. 3_1_5R]
gi|257466494|ref|ZP_05630805.1| biopolymer transport exbB protein [Fusobacterium gonidiaformans
ATCC 25563]
gi|315917651|ref|ZP_07913891.1| biopolymer transport exbB protein [Fusobacterium gonidiaformans
ATCC 25563]
gi|317059176|ref|ZP_07923661.1| biopolymer transport exbB protein [Fusobacterium sp. 3_1_5R]
gi|313684852|gb|EFS21687.1| biopolymer transport exbB protein [Fusobacterium sp. 3_1_5R]
gi|313691526|gb|EFS28361.1| biopolymer transport exbB protein [Fusobacterium gonidiaformans
ATCC 25563]
Length = 202
Score = 45.1 bits (105), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 87/181 (48%), Gaps = 21/181 (11%)
Query: 27 IITLLFIFSILSWSVIIQKSVNFITLRRQF-----REFEQLFWSGQSLETV--CKSLKNH 79
I+ +LF S+ + ++I++K+V F T ++ ++ L +G+ E + C++ K
Sbjct: 11 ILWVLFFMSMGALAIILEKTVFFTTKEKKVNANFKKDINDLISAGKVEEAIQLCETQKGS 70
Query: 80 HNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMS 139
+A + + KK D +QD + ++ + + + LS L ++
Sbjct: 71 ----VAGSIKTFLKRAKKGQD--------VQDY-ESIIKEIMLESMSPLDRGLSSLEAIG 117
Query: 140 SAGLLVGILGAVLGMMGFFQSIAGYYSNN-VVSIPGIIESLISILLGLCVSIPSSIAYNK 198
S + G+LG V GM+ F +I+ + + + GI E+L++ GL V+IP AYN
Sbjct: 118 SLAPMCGLLGTVTGMIKAFINISKMGAGDPTIVADGISEALVTTAAGLYVAIPVIAAYNI 177
Query: 199 F 199
F
Sbjct: 178 F 178
>gi|326571203|gb|EGE21227.1| motA/TolQ/ExbB proton channel [Moraxella catarrhalis BC7]
gi|326573122|gb|EGE23091.1| motA/TolQ/ExbB proton channel [Moraxella catarrhalis CO72]
Length = 182
Score = 45.1 bits (105), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Query: 121 IARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESL 179
IAR E+ + L LG+ +S +G+ G V G+ SI + + G + E+L
Sbjct: 79 IARHRYELEKGLPVLGTTASIAPFIGLFGTVWGIFHALHSIGATGQAGLAQVAGPVGEAL 138
Query: 180 ISILLGLCVSIPSSIAYN 197
I LGL V+IP+ I YN
Sbjct: 139 IMTGLGLAVAIPAVIFYN 156
>gi|119356439|ref|YP_911083.1| MotA/TolQ/ExbB proton channel [Chlorobium phaeobacteroides DSM 266]
gi|119353788|gb|ABL64659.1| outer membrane transport energization protein ExbB [Chlorobium
phaeobacteroides DSM 266]
Length = 248
Score = 45.1 bits (105), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 66/141 (46%), Gaps = 13/141 (9%)
Query: 78 NHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE------K 131
+ H L+A+ S + +KK + I DR R+ ++ A E I E
Sbjct: 98 DEHQSCLSAVLRSVLDRYKK------MGSLNITDRDKRISEMEKAVEEATIMEMPLLEKN 151
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISILLGLCVSI 190
L + +++S ++G+LG LGM+ F ++A + + V + GI E+L + LG+ I
Sbjct: 152 LVAISTIASISTMIGLLGTTLGMIRAFAAMATSGAPDAVQLSLGISEALFNTALGIVGGI 211
Query: 191 PSSIAYNKFIEDSKKFAMQME 211
+ YN FI F+ ++
Sbjct: 212 MGIVTYNVFISKVDHFSYMID 232
>gi|332306760|ref|YP_004434611.1| MotA/TolQ/ExbB proton channel [Glaciecola agarilytica 4H-3-7+YE-5]
gi|332174089|gb|AEE23343.1| MotA/TolQ/ExbB proton channel [Glaciecola agarilytica 4H-3-7+YE-5]
Length = 230
Score = 45.1 bits (105), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 66/125 (52%), Gaps = 9/125 (7%)
Query: 100 DKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQ 159
DK + + I+D I R +AIA ++ L L +++ L+G+ G V+GM+ F+
Sbjct: 82 DKSSLALDDIKDEIYRQAQLAIA----QLNSYLRVLEVIATLAPLMGLFGTVIGMIEAFK 137
Query: 160 SI--AGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEF 217
++ AG N V GI ++L++ +GL V+IP S+ N + E +K ++ + N+
Sbjct: 138 AMESAGAQVNPAVLSGGIWQALLTTAVGLAVAIPVSM-LNSYFE--RKAEVEAQAIQNDL 194
Query: 218 SAILS 222
+ +
Sbjct: 195 QRVFT 199
>gi|296113018|ref|YP_003626956.1| motA/TolQ/ExbB proton channel [Moraxella catarrhalis RH4]
gi|295920712|gb|ADG61063.1| motA/TolQ/ExbB proton channel [Moraxella catarrhalis RH4]
gi|326564001|gb|EGE14246.1| motA/TolQ/ExbB proton channel [Moraxella catarrhalis 103P14B1]
gi|326564055|gb|EGE14299.1| motA/TolQ/ExbB proton channel [Moraxella catarrhalis 12P80B1]
gi|326570522|gb|EGE20562.1| motA/TolQ/ExbB proton channel [Moraxella catarrhalis BC8]
gi|326576119|gb|EGE26035.1| motA/TolQ/ExbB proton channel [Moraxella catarrhalis 101P30B1]
gi|326577069|gb|EGE26963.1| motA/TolQ/ExbB proton channel [Moraxella catarrhalis O35E]
Length = 182
Score = 45.1 bits (105), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Query: 121 IARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESL 179
IAR E+ + L LG+ +S +G+ G V G+ SI + + G + E+L
Sbjct: 79 IARHRYELEKGLPVLGTTASIAPFIGLFGTVWGIFHALHSIGATGQAGLAQVAGPVGEAL 138
Query: 180 ISILLGLCVSIPSSIAYN 197
I LGL V+IP+ I YN
Sbjct: 139 IMTGLGLAVAIPAVIFYN 156
>gi|225847923|ref|YP_002728086.1| MotA/TolQ/ExbB proton channel [Sulfurihydrogenibium azorense
Az-Fu1]
gi|225643722|gb|ACN98772.1| MotA/TolQ/ExbB proton channel [Sulfurihydrogenibium azorense
Az-Fu1]
Length = 146
Score = 45.1 bits (105), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 53/104 (50%), Gaps = 4/104 (3%)
Query: 109 IQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN 168
I+ +D+ + + +LE+ +L L + + +G+ G VLG++ F +
Sbjct: 43 IEQNLDKYDPLELRLQLEK---RLGILATFGNNAPFIGLFGTVLGVIKAFHHLGTSSEFG 99
Query: 169 V-VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
V V + GI E+L++ +GL V+IP+ I YN F+ K M E
Sbjct: 100 VRVVMTGISEALVATAMGLFVAIPAVIGYNYFVRKMKFLLMIYE 143
>gi|114320592|ref|YP_742275.1| MotA/TolQ/ExbB proton channel [Alkalilimnicola ehrlichii MLHE-1]
gi|114226986|gb|ABI56785.1| MotA/TolQ/ExbB proton channel [Alkalilimnicola ehrlichii MLHE-1]
Length = 218
Score = 45.1 bits (105), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 91/200 (45%), Gaps = 18/200 (9%)
Query: 35 SILSWSVIIQKSVNFITLRRQFREFEQLFW----SGQSLETVCKSLKNHHNIGLAAIFMS 90
SIL+ ++I++++V R W +GQ + L+ H +G
Sbjct: 19 SILALAIIVERAVALQKRRVVPPGLLADTWRQVKAGQMDAVGLRRLRQHSPLGRVLGAGL 78
Query: 91 AMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGA 150
A ++ ++ A +G + A LE L+ LG++++ L+G+LG
Sbjct: 79 ANADCRREVMTEAIEDVGRHE----------AHRLERF---LNTLGTLAAITPLLGLLGT 125
Query: 151 VLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQ 209
V+GM+ F I+ + ++ G I E+LI+ GL V+IP+ +AY F ++ ++
Sbjct: 126 VIGMIKVFSVISLQGLGDTPAMAGGISEALITTAAGLSVAIPTLMAYRYFRGRVEELVVE 185
Query: 210 MEGFANEFSAILSRQTEGNI 229
+E A + +L Q ++
Sbjct: 186 IEQEALKLVEVLQGQRSNDL 205
>gi|226952973|ref|ZP_03823437.1| biopolymer transport protein (EXBB-like) [Acinetobacter sp. ATCC
27244]
gi|226836294|gb|EEH68677.1| biopolymer transport protein (EXBB-like) [Acinetobacter sp. ATCC
27244]
Length = 209
Score = 45.1 bits (105), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 101/204 (49%), Gaps = 21/204 (10%)
Query: 31 LFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLK----NHHNIGLAA 86
L + SI + ++II++ +I L+R + L G +E V +L+ NH +G
Sbjct: 15 LILSSIFTVAIIIER---YIRLKRSQVLPQALLVKGADVENVISTLEQPEINHSALGR-- 69
Query: 87 IFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVG 146
+ A + + ++ AR+ M+ + E+ + + ++FLG++ + L+G
Sbjct: 70 -ILKAGYDHQDQGEQFARA----------QMEATASEEITHLEKNINFLGTLGAIAPLLG 118
Query: 147 ILGAVLGMMGFFQSI-AGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKK 205
+LG VLG++ F + G N + +PGI +LI+ +G+ ++IP+ IAY F +
Sbjct: 119 LLGTVLGIIEAFLVVDVGSAGNASMMMPGISTALITTAVGMLIAIPAMIAYRYFQRVVHE 178
Query: 206 FAMQMEGFANEFSAILSRQTEGNI 229
+ ++E + F A L + ++
Sbjct: 179 YVAELEQQSTLFHAALFHKKTPHV 202
>gi|329895073|ref|ZP_08270818.1| MotA/TolQ/ExbB proton channel family protein [gamma proteobacterium
IMCC3088]
gi|328922518|gb|EGG29856.1| MotA/TolQ/ExbB proton channel family protein [gamma proteobacterium
IMCC3088]
Length = 213
Score = 45.1 bits (105), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 80/162 (49%), Gaps = 19/162 (11%)
Query: 59 FEQLFWSGQSLETVCKSLKNHHNIG--LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRM 116
F+Q+ SGQ ++LK+ ++G LAA M+A K D S IQD
Sbjct: 50 FQQI-KSGQMNAEKLRALKSSSHLGHILAAGLMNA----KAGRDIMKES---IQD----- 96
Query: 117 MDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GI 175
A ++ + E+ L+ LG++++ L+G+LG V+GM+ F I + N ++ GI
Sbjct: 97 ---AGSQVVHELERFLNTLGTIAAIAPLMGLLGTVIGMISVFTEIVTQGTGNAGALAGGI 153
Query: 176 IESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEF 217
++LI+ GL V+IP+ + + ++ME AN
Sbjct: 154 SQALITTAAGLTVAIPALVMHRYLQGRVDAIVVRMEQDANRL 195
>gi|253582118|ref|ZP_04859342.1| biopolymer transport exbB protein [Fusobacterium varium ATCC 27725]
gi|251836467|gb|EES65004.1| biopolymer transport exbB protein [Fusobacterium varium ATCC 27725]
Length = 203
Score = 45.1 bits (105), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 88/189 (46%), Gaps = 15/189 (7%)
Query: 35 SILSWSVIIQKSVNFI-----TLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFM 89
SI+ +V+I++ + F + R E QL G E + L N+ A +
Sbjct: 18 SIIGLAVVIERFIYFKLSEKDSFNRINPELRQLIEKGSIKEAIV--LLNNKKASAARVLK 75
Query: 90 SAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILG 149
+ ++ KS K P ++++ V I LE+ LS + ++ L+G+LG
Sbjct: 76 DILIQYYKSNSK---DPTMLEEKGKESAMVQIPL-LEKHMWILSLVAHITP---LLGLLG 128
Query: 150 AVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAM 208
V GM+ FQ+++ + + + V GI E+L + GL V+IP++I YN F + +
Sbjct: 129 TVTGMIKAFQAVSIHGTGDASVLAKGISEALFTTAGGLFVAIPATIFYNYFNKKIDETIN 188
Query: 209 QMEGFANEF 217
ME + E
Sbjct: 189 DMEKTSTEL 197
>gi|300774591|ref|ZP_07084454.1| biopolymer transporter [Chryseobacterium gleum ATCC 35910]
gi|300506406|gb|EFK37541.1| biopolymer transporter [Chryseobacterium gleum ATCC 35910]
Length = 234
Score = 45.1 bits (105), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 57/110 (51%), Gaps = 4/110 (3%)
Query: 117 MDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMM-GFFQ--SIAGYYSNNVVSIP 173
M+ E+ + + L+ L + S ++G+LG V+GM+ FF G +S +S
Sbjct: 124 MEAQAQVEVANMEKNLNLLAVVPSIAPMLGLLGTVIGMIIAFFNLSHATGSFSPKTLS-E 182
Query: 174 GIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
GI +L +GL V+IP++ YN + KF ++ + + EF ++++
Sbjct: 183 GIYTALGQTAVGLAVAIPANFCYNILLTRIDKFVLKAQNMSGEFLDLINK 232
>gi|225849976|ref|YP_002730210.1| biopolymer transport protein ExbB [Persephonella marina EX-H1]
gi|225644778|gb|ACO02964.1| biopolymer transport protein ExbB [Persephonella marina EX-H1]
Length = 154
Score = 45.1 bits (105), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCV 188
++L L + + +G+ G VLG++ F + V V + GI E+L++ +GL V
Sbjct: 61 KRLGILATFGNNAPFIGLFGTVLGIIKAFHDLGTSTEFGVRVVMQGISEALVATAMGLFV 120
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFAN 215
+IP+ IAYN F+ K + E N
Sbjct: 121 AIPAVIAYNYFVRKVKTILLTYEQKKN 147
>gi|94264751|ref|ZP_01288530.1| MotA/TolQ/ExbB proton channel [delta proteobacterium MLMS-1]
gi|93454797|gb|EAT05050.1| MotA/TolQ/ExbB proton channel [delta proteobacterium MLMS-1]
Length = 210
Score = 45.1 bits (105), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 53/105 (50%), Gaps = 3/105 (2%)
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQ--SIAGYYSNNVVSIPGIIESLIS 181
EL+ + + L +M + L+GILG V+G++ F+ AG V+ GI ++LI+
Sbjct: 97 ELQRMRRFMGVLDTMITVAPLLGILGTVVGIINSFEMLETAGIEEPGKVTA-GIAQALIT 155
Query: 182 ILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
GL ++I S YN F ++ A+ +E +A I + E
Sbjct: 156 TAAGLSIAIFSVFPYNYFNARAENAALNIEKYATSLEIIFQKTAE 200
>gi|254442543|ref|ZP_05056019.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Verrucomicrobiae bacterium DG1235]
gi|198256851|gb|EDY81159.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Verrucomicrobiae bacterium DG1235]
Length = 462
Score = 45.1 bits (105), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSI 190
LS + ++ L+G+LG V GM+ F+ I + + + S+ G I E+LI+ LGL V+I
Sbjct: 368 LSVIAVTAAVAPLLGLLGTVTGMINTFKMITLFGTGDASSLSGGISEALITTELGLVVAI 427
Query: 191 PSSIAYNKFIEDSKKFAMQMEGFA 214
PS +A+ ++ ME A
Sbjct: 428 PSLVAHAMLNRKAQSIMANMEKLA 451
>gi|196234529|ref|ZP_03133352.1| MotA/TolQ/ExbB proton channel [Chthoniobacter flavus Ellin428]
gi|196221409|gb|EDY15956.1| MotA/TolQ/ExbB proton channel [Chthoniobacter flavus Ellin428]
Length = 255
Score = 45.1 bits (105), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 8/79 (10%)
Query: 144 LVGILGAVLGMMGFFQSIAGYYSNNVVSIP-----GIIESLISILLGLCVSIPSSIAYNK 198
L+G+LGAV G++ F + +++ P GI E+L + ++GL V+IPS IAY+
Sbjct: 133 LLGLLGAVSGLISVF---GAFGADSATQDPHGIAKGISEALSTTIVGLAVAIPSLIAYSY 189
Query: 199 FIEDSKKFAMQMEGFANEF 217
F + + A +ME E
Sbjct: 190 FTKKVETMAAEMESLVAEL 208
>gi|260654395|ref|ZP_05859885.1| MotA/TolQ/ExbB proton channel family protein [Jonquetella anthropi
E3_33 E1]
gi|260631028|gb|EEX49222.1| MotA/TolQ/ExbB proton channel family protein [Jonquetella anthropi
E3_33 E1]
Length = 210
Score = 45.1 bits (105), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 77/153 (50%), Gaps = 20/153 (13%)
Query: 53 RRQFREFEQ-------LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARS 105
RR + + E+ + +G+ E + S+ + + L + + +S WK S GA
Sbjct: 37 RRAWEDPEEAEGIAADMLAAGRPAEALA-SVSDGPDTSLRRVLRAGLSHWKLS---GA-- 90
Query: 106 PIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYY 165
++D ++ I RE + L FL + L+G+LG V+GM+ FQ++
Sbjct: 91 --DLRD----LLQQEIRREAFRWSWGLGFLSVTARVAPLLGLLGTVVGMVDIFQALPEVS 144
Query: 166 SNNVVSIP-GIIESLISILLGLCVSIPSSIAYN 197
S+ + ++ GI ++L + + GL ++IP+ +A++
Sbjct: 145 SSPMTALAGGIYKALFTTVAGLIIAIPALLAHS 177
>gi|302392223|ref|YP_003828043.1| MotA/TolQ/ExbB proton channel [Acetohalobium arabaticum DSM 5501]
gi|302204300|gb|ADL12978.1| MotA/TolQ/ExbB proton channel [Acetohalobium arabaticum DSM 5501]
Length = 221
Score = 45.1 bits (105), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 93/211 (44%), Gaps = 23/211 (10%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLR----RQFREFEQLFWSGQSLETVCKSLKNHHNIG 83
I L I SILS ++I+++ F ++ R + + L G+ + K N
Sbjct: 12 IIPLLICSILSVAIILERYFYFRSINNNDFRLVKRVKLLLSDGKL--SKAKKEAEKTNGP 69
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDR--IDRMMDVAIARELEEITEKLSFLGSMSSA 141
+AA+ ++ + +++ DR + + E+ + ++L L ++S
Sbjct: 70 IAAMVLAGLEKYR-------------HDRQTVKEFIQARGQHEIRVMEKRLRVLDFIASV 116
Query: 142 GLLVGILGAVLGMMGFFQSIAGYYSNNVVSI--PGIIESLISILLGLCVSIPSSIAYNKF 199
L+G+LG V+G++ F +AG S GI E+LIS +GL V+IP+ + Y
Sbjct: 117 SPLLGLLGTVIGIIKSFDILAGAQGMAAPSALSSGIAEALISTAIGLIVAIPTMLFYTYL 176
Query: 200 IEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
+ +M+ ++ +L+ N S
Sbjct: 177 DSKVEAKMTEMQQWSTRLIEMLAEDPSSNCS 207
>gi|297620445|ref|YP_003708582.1| putative biopolymer transport protein ExbB [Waddlia chondrophila
WSU 86-1044]
gi|297375746|gb|ADI37576.1| putative biopolymer transport protein ExbB [Waddlia chondrophila
WSU 86-1044]
Length = 214
Score = 45.1 bits (105), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 63/123 (51%), Gaps = 9/123 (7%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
++ I+ M++A E+ ++ + L ++ LVG+LG VLG F Q+ A + +
Sbjct: 94 KEEIENSMEIAGMIEIAQLEKNAKILSIIAHIAPLVGLLGTVLG---FIQAFAEMRMSGL 150
Query: 170 VSI------PGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
V I + +L++ GL V+IPS +AYN + + F ++++ ++E +L
Sbjct: 151 VDISANRIGEAMEYALVTTAAGLVVAIPSVLAYNYVVSRIEGFILEIQTSSSEIVDLLVY 210
Query: 224 QTE 226
Q E
Sbjct: 211 QKE 213
>gi|269798755|ref|YP_003312655.1| MotA/TolQ/ExbB proton channel [Veillonella parvula DSM 2008]
gi|269095384|gb|ACZ25375.1| MotA/TolQ/ExbB proton channel [Veillonella parvula DSM 2008]
Length = 203
Score = 45.1 bits (105), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 56/121 (46%), Gaps = 5/121 (4%)
Query: 110 QDR--IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSN 167
QDR + M+ +A + L +L ++ + L+G+LG V GM+G FQ +
Sbjct: 84 QDRNVLQSKMEDMVAHVYTHASRGLDWLSTIVTMAPLLGLLGTVTGMIGAFQVFGADGAV 143
Query: 168 NVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEG 227
G+ E+LI+ GLCV+I + + F + ++E + FS IL G
Sbjct: 144 PTAITGGVGEALIATASGLCVAIVALCFHAAFTHHVRMTIARLE---DSFSRILDSYDRG 200
Query: 228 N 228
+
Sbjct: 201 H 201
>gi|218781519|ref|YP_002432837.1| MotA/TolQ/ExbB proton channel [Desulfatibacillum alkenivorans
AK-01]
gi|218762903|gb|ACL05369.1| MotA/TolQ/ExbB proton channel [Desulfatibacillum alkenivorans
AK-01]
Length = 476
Score = 45.1 bits (105), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 61/120 (50%), Gaps = 16/120 (13%)
Query: 94 EWKKSCD--KGARS-PI------GIQDRIDRMMDV------AIARELEEITEKLSFLGSM 138
+WK+ D K +S P+ GI+ R MD+ AI E+ + LS + M
Sbjct: 326 DWKECLDLLKAQKSKPLARVLAWGIKHRHLERMDMENALQEAILGEIPALERFLSIIAMM 385
Query: 139 SSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISILLGLCVSIPSSIAYN 197
++ L+G+LG V GM+ F I Y + + + GI E+L++ +LGL +IP +A+
Sbjct: 386 AAVAPLLGLLGTVTGMINTFHVITYYGAGDPKMMSGGISEALLTTMLGLAAAIPIMLAHT 445
>gi|317060725|ref|ZP_07925210.1| LOW QUALITY PROTEIN: biopolymer transport exbB protein
[Fusobacterium sp. D12]
gi|313686401|gb|EFS23236.1| LOW QUALITY PROTEIN: biopolymer transport exbB protein
[Fusobacterium sp. D12]
Length = 215
Score = 45.1 bits (105), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 49/87 (56%), Gaps = 2/87 (2%)
Query: 114 DRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-VVSI 172
++ +VAI ++L + + + + LVG+LG V GM+ FQ++A Y + + V
Sbjct: 106 EKGKEVAI-QQLRHLERNMWLISVAAHVAPLVGLLGTVTGMIKAFQAVALYGTGDPAVLA 164
Query: 173 PGIIESLISILLGLCVSIPSSIAYNKF 199
GI E+L + GL V+IP+ I YN +
Sbjct: 165 KGISEALYTTAGGLFVAIPAMILYNYY 191
>gi|322419085|ref|YP_004198308.1| MotA/TolQ/ExbB proton channel [Geobacter sp. M18]
gi|320125472|gb|ADW13032.1| MotA/TolQ/ExbB proton channel [Geobacter sp. M18]
Length = 598
Score = 45.1 bits (105), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 46/92 (50%), Gaps = 18/92 (19%)
Query: 140 SAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCVSIPSSIAY-- 196
S G G+LG V G+M F S+A N+ +I PG+ +L L GL V+IP+ AY
Sbjct: 508 SGGPFWGLLGTVWGVMNTFASLAEAGEANLSAIAPGVASALACTLFGLLVAIPALFAYSF 567
Query: 197 ------------NKFIEDSKKFAMQMEGFANE 216
+ FIE+ + +++EGF E
Sbjct: 568 LGVQIKHLNNETHHFIEE---YCLRVEGFHGE 596
>gi|110834828|ref|YP_693687.1| MotA/TolQ/ExbB proton channel family protein [Alcanivorax
borkumensis SK2]
gi|110647939|emb|CAL17415.1| MotA/TolQ/ExbB proton channel family protein [Alcanivorax
borkumensis SK2]
Length = 223
Score = 45.1 bits (105), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 45/75 (60%), Gaps = 2/75 (2%)
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISI 182
L+E+ L L +S+ L+G+LG V GM+G FQ++ AG + + GI E+L++
Sbjct: 104 LDELRGGLRVLEVISAIAPLLGLLGTVFGMIGAFQALEMAGSQVDPSILSGGIWEALLTT 163
Query: 183 LLGLCVSIPSSIAYN 197
GL V+IP+ A++
Sbjct: 164 AAGLTVAIPTLAAFH 178
>gi|163754134|ref|ZP_02161257.1| putative biopolymer transport protein [Kordia algicida OT-1]
gi|161326348|gb|EDP97674.1| putative biopolymer transport protein [Kordia algicida OT-1]
Length = 231
Score = 45.1 bits (105), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 60/115 (52%), Gaps = 2/115 (1%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA--GYYSNN 168
+ I++ ++ A E+ ++ + +S L +++ A ++G LG V+GM+ F +A G +
Sbjct: 115 EDINKAIENAGTLEVYKLEKNVSILATVAGAAPMIGFLGTVIGMILAFHEMATSGGQAEM 174
Query: 169 VVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
GI ++ + + GL V I + I YN + + K QME A +F +L+
Sbjct: 175 GSLAGGIYTAMTTTVAGLIVGIIAYIGYNHLVVKTDKVVHQMEANAVDFLDLLNE 229
>gi|149198901|ref|ZP_01875943.1| transport protein TolQ-like protein [Lentisphaera araneosa
HTCC2155]
gi|149138099|gb|EDM26510.1| transport protein TolQ-like protein [Lentisphaera araneosa
HTCC2155]
Length = 447
Score = 45.1 bits (105), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 51/89 (57%), Gaps = 3/89 (3%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA--GYYSN 167
++ ++ +++ I EL + + L + A L+G+LG V+G++ F+ I G
Sbjct: 332 REDLEELLNETILSELPRLDRLMHILSVSAGAAPLMGLLGTVMGIIKTFEMIGIYGTADT 391
Query: 168 NVVSIPGIIESLISILLGLCVSIPSSIAY 196
N +S+ GI E+L++ +GL V+IP+ I Y
Sbjct: 392 NQLSL-GISEALVTTEVGLVVAIPTLITY 419
>gi|332298578|ref|YP_004440500.1| MotA/TolQ/ExbB proton channel [Treponema brennaborense DSM 12168]
gi|332181681|gb|AEE17369.1| MotA/TolQ/ExbB proton channel [Treponema brennaborense DSM 12168]
Length = 207
Score = 45.1 bits (105), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 84/189 (44%), Gaps = 9/189 (4%)
Query: 33 IFSILSWSVIIQKSVNFITLRRQFREFEQL--FWSGQSLET-----VCKSLKNHHNIGLA 85
+F IL ++ + + F FE+L F+S + +T V + + H
Sbjct: 1 MFDILRSGGLLMIPIGLCAVSATFIIFERLYYFFSIKKRDTPLVSEVSRLIAAHRYEDAV 60
Query: 86 AIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLV 145
+ ++A + + K +D I + V + E+ L+ LG++++ L+
Sbjct: 61 SYCVNADTPAARVVKKAVECRTWPEDHIREAVSVETDTVIPELEHFLTPLGTIANISTLL 120
Query: 146 GILGAVLGMMGFFQSI-AGYYSNNVVSIPG-IIESLISILLGLCVSIPSSIAYNKFIEDS 203
G+LG V G + F + AG + S+ G I E+L++ GL VSIPS I +N FI
Sbjct: 121 GLLGTVTGNIQAFGLLGAGGSMGDPASLAGAIAEALVTTAAGLVVSIPSVIFHNYFISRV 180
Query: 204 KKFAMQMEG 212
+ +E
Sbjct: 181 NRRITDIEA 189
>gi|15618694|ref|NP_224980.1| proton channel protein TolQ [Chlamydophila pneumoniae CWL029]
gi|15836318|ref|NP_300842.1| macromolecule transporter [Chlamydophila pneumoniae J138]
gi|16752256|ref|NP_445624.1| MotA/TolQ/ExbB proton channel family protein [Chlamydophila
pneumoniae AR39]
gi|33242144|ref|NP_877085.1| ExbB [Chlamydophila pneumoniae TW-183]
gi|4377094|gb|AAD18923.1| Macromolecule transporter [Chlamydophila pneumoniae CWL029]
gi|8163550|gb|AAF73729.1| MotA/TolQ/ExbB proton channel family protein [Chlamydophila
pneumoniae AR39]
gi|8979158|dbj|BAA98993.1| macromolecule transporter [Chlamydophila pneumoniae J138]
gi|33236654|gb|AAP98742.1| ExbB [Chlamydophila pneumoniae TW-183]
Length = 232
Score = 45.1 bits (105), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 94/208 (45%), Gaps = 30/208 (14%)
Query: 25 KCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNI-- 82
K I L I S+ +W+V+ QK + +++ F + +G+SL+ +KN H
Sbjct: 21 KSIFFCLLILSVCTWTVLHQK----LAIQKNFLK------AGKSLKDFL--IKNRHAPLS 68
Query: 83 --------GLAAIFMSAMSEWKKSCDKGA-----RSPIGIQDRIDRMMDV--AIARELEE 127
A ++ + + DK R PI + I + + AI + +
Sbjct: 69 LDIHPELSPFADLYFTIKRGTLELLDKNRQSAPDRGPILSSEDIQSLETLLGAIMPKYKA 128
Query: 128 ITEKLSFLGSMS-SAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGL 186
+ K SF+ + + S +G+LG V G++ F I+ S N + G+ +L + ++GL
Sbjct: 129 LLHKNSFIPATTISLAPFLGLLGTVWGILVAFTHISSGSSGNSAIMEGLATALGTTIIGL 188
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFA 214
V+IPS IA+N S + ++E A
Sbjct: 189 FVAIPSLIAFNYLKAHSSELISEIEQTA 216
>gi|325981587|ref|YP_004293989.1| MotA/TolQ/ExbB proton channel [Nitrosomonas sp. AL212]
gi|325531106|gb|ADZ25827.1| MotA/TolQ/ExbB proton channel [Nitrosomonas sp. AL212]
Length = 202
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 54/103 (52%)
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILL 184
+ +++ L+ LG++++ L+G+ G ++GM+ F S + SN GI +L +
Sbjct: 100 VHDLSRYLTTLGTIAALSPLMGLFGTLVGMIEIFGSNSPTGSNPAQLAYGISVALYNAAF 159
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEG 227
G+ V+IPS I Y F F ++ME A + I+ + EG
Sbjct: 160 GILVAIPSMIFYRHFRAKVDDFVVEMELQALKLVEIVHGEREG 202
>gi|209964129|ref|YP_002297044.1| MotA [Rhodospirillum centenum SW]
gi|209957595|gb|ACI98231.1| MotA [Rhodospirillum centenum SW]
Length = 463
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 117 MDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGI 175
+D AI +E+ ++ +S + ++ L+G+LG V GM+ FQ+I + + + + GI
Sbjct: 347 LDEAILKEIPKLERGISTIKVFAAIAPLLGLLGTVTGMIKTFQAITLFGTGDPKLMAGGI 406
Query: 176 IESLISILLGLCVSIPSSIAYN 197
E+L++ +LGL V+IP + Y+
Sbjct: 407 SEALVTTVLGLVVAIPMVLLYS 428
>gi|83950280|ref|ZP_00959013.1| MotA/TolQ/ExbB proton channel family domain protein [Roseovarius
nubinhibens ISM]
gi|83838179|gb|EAP77475.1| MotA/TolQ/ExbB proton channel family domain protein [Roseovarius
nubinhibens ISM]
Length = 222
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 51/94 (54%), Gaps = 3/94 (3%)
Query: 108 GIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYY 165
G D +DR+ A AR + FL ++S L+G+ G VLGM+ FQ++ AG
Sbjct: 88 GQADDLDRLRSEAEAR-FARLERGFRFLDTVSQLAPLLGLFGTVLGMIQAFQALQEAGSQ 146
Query: 166 SNNVVSIPGIIESLISILLGLCVSIPSSIAYNKF 199
+ + GI +L++ +GL V++P+S+ + F
Sbjct: 147 VDPSILAGGIWVALLTTAVGLAVAMPTSMVLSWF 180
>gi|118579889|ref|YP_901139.1| MotA/TolQ/ExbB proton channel [Pelobacter propionicus DSM 2379]
gi|118502599|gb|ABK99081.1| outer membrane transport energization protein ExbB [Pelobacter
propionicus DSM 2379]
Length = 144
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 48/87 (55%), Gaps = 3/87 (3%)
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA--GYYSNNVVSIPGIIESLISILL 184
E+T +L + ++ S +G+LG VLG+M F ++ G+ + V + G+ ++ +
Sbjct: 51 ELTSRLHLIATVGSNAPYLGLLGTVLGIMLTFATMGREGFMDTSKVMV-GLALAMKATAA 109
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQME 211
GLCV+IPS++ YN + K + E
Sbjct: 110 GLCVAIPSTVLYNLLLRRVKVLMFRWE 136
>gi|257463129|ref|ZP_05627530.1| biopolymer transport exbB protein [Fusobacterium sp. D12]
Length = 203
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 49/87 (56%), Gaps = 2/87 (2%)
Query: 114 DRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-VVSI 172
++ +VAI ++L + + + + LVG+LG V GM+ FQ++A Y + + V
Sbjct: 94 EKGKEVAI-QQLRHLERNMWLISVAAHVAPLVGLLGTVTGMIKAFQAVALYGTGDPAVLA 152
Query: 173 PGIIESLISILLGLCVSIPSSIAYNKF 199
GI E+L + GL V+IP+ I YN +
Sbjct: 153 KGISEALYTTAGGLFVAIPAMILYNYY 179
>gi|78357196|ref|YP_388645.1| TolQ-like transport protein [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
gi|78219601|gb|ABB38950.1| outer membrane transport energization protein ExbB [Desulfovibrio
desulfuricans subsp. desulfuricans str. G20]
Length = 474
Score = 44.7 bits (104), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 55/113 (48%), Gaps = 1/113 (0%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI 172
I+ A+ +EL + L L +++ L+G+LG V GM+ FQ+I Y + + +
Sbjct: 349 IENAYQEAMLKELPVLERFLPTLSVLAAVAPLLGLLGTVTGMINTFQTITLYGTGDPRMM 408
Query: 173 P-GIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
GI E+LI+ LGL V++P I ++ ME F+ L +Q
Sbjct: 409 SGGISEALITTQLGLAVAVPIMILHHILERRVDALMGDMEEKGTSFTVALMQQ 461
>gi|262038091|ref|ZP_06011496.1| biopolymer transport ExbB protein [Leptotrichia goodfellowii F0264]
gi|261747911|gb|EEY35345.1| biopolymer transport ExbB protein [Leptotrichia goodfellowii F0264]
Length = 211
Score = 44.7 bits (104), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 40/195 (20%), Positives = 95/195 (48%), Gaps = 15/195 (7%)
Query: 31 LFIFSILSWSVIIQKSVNFITLRRQF-REFEQLFW------SGQSLETVCKSLKNHHNIG 83
+ + SI +VI++K+ F+T ++ EF++ + + + + +C K+
Sbjct: 15 ILLASICGLAVILEKAALFLTKEKKLTEEFKRKLYKTLKKGNKKEILDLCSERKD----S 70
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
++ I + ++ + DK S + ++ ++ I + ++ + + LG++ +
Sbjct: 71 VSQILVKTVNNMEIDLDKADHSH---KQYVEEIITENILEQTMKLEKGMWLLGAVVNTAP 127
Query: 144 LVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISILLGLCVSIPSSIAYNKFIED 202
+G+LG V GM+ F +++ + + ++ GI E+L + GL V+IP + YN F +
Sbjct: 128 QLGLLGTVTGMIVSFSALSTNNTESARAVASGISEALYTTAFGLMVAIPFLVFYNYFNKK 187
Query: 203 SKKFAMQMEGFANEF 217
++ME + +F
Sbjct: 188 IDDTVLEMERVSLQF 202
>gi|121998038|ref|YP_001002825.1| MotA/TolQ/ExbB proton channel [Halorhodospira halophila SL1]
gi|121589443|gb|ABM62023.1| MotA/TolQ/ExbB proton channel [Halorhodospira halophila SL1]
Length = 210
Score = 44.7 bits (104), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 53/93 (56%), Gaps = 3/93 (3%)
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISI 182
E + L+ LG++++ L+G+LG V+GM+ F +I+ ++ ++ GI E+LI+
Sbjct: 99 EAHRLERYLNTLGTIAAISPLLGLLGTVIGMIKVFGAISAEGLGDMAALSGGIAEALITT 158
Query: 183 LLGLCVSIPSSIAYN--KFIEDSKKFAMQMEGF 213
GL ++IP+ +AY + + D + M+ E
Sbjct: 159 ASGLTIAIPALMAYRYLRGLVDERVVEMEQEAM 191
>gi|297537853|ref|YP_003673622.1| MotA/TolQ/ExbB proton channel [Methylotenera sp. 301]
gi|297257200|gb|ADI29045.1| MotA/TolQ/ExbB proton channel [Methylotenera sp. 301]
Length = 201
Score = 44.7 bits (104), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 68/146 (46%), Gaps = 14/146 (9%)
Query: 66 GQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
G + ET+ + L+ H +G +F SA+S K S + I A+A L
Sbjct: 55 GVTKETISR-LEQHSLLG--QVFASALSNAKNSRE--------ITKEAIEETGRAVAHSL 103
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLG 185
E+ LS LG++++ L+G+LG V+GM+ F + + GI +L + G
Sbjct: 104 EKY---LSTLGTIATVAPLLGLLGTVIGMVELFGAFTSTGHDIAQFARGISVALYNTAAG 160
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQME 211
+ V++P+ IAY F + ME
Sbjct: 161 IVVAVPAMIAYRYFRSKVDDLLVGME 186
>gi|90581004|ref|ZP_01236805.1| TolR [Vibrio angustum S14]
gi|90437882|gb|EAS63072.1| TolR [Vibrio angustum S14]
Length = 453
Score = 44.7 bits (104), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 48/82 (58%), Gaps = 4/82 (4%)
Query: 134 FLGSM---SSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISILLGLCVS 189
F+GS+ +S L+G+LG V+GM+G FQ+I + + + + GI E+L++ +LGL V+
Sbjct: 353 FVGSIKLFASVAPLLGLLGTVMGMIGTFQAITLFGTGDPKLMAGGISEALVTTMLGLVVA 412
Query: 190 IPSSIAYNKFIEDSKKFAMQME 211
IP Y S++ +E
Sbjct: 413 IPLLFLYTLVHSKSRRLIQTLE 434
>gi|262065975|ref|ZP_06025587.1| biopolymer transport ExbB protein [Fusobacterium periodonticum ATCC
33693]
gi|291380332|gb|EFE87850.1| biopolymer transport ExbB protein [Fusobacterium periodonticum ATCC
33693]
Length = 202
Score = 44.7 bits (104), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 95/189 (50%), Gaps = 24/189 (12%)
Query: 17 FMQMGLAVKCIITLLFIFSILSWSVIIQK----SVNFITLRRQFREFEQLFWSGQSLE-- 70
++Q+G I+ +L I SI +++VI+++ S N + F+E + + ++
Sbjct: 4 YLQVG---GPILWVLTIISIAAFAVILERIAFFSRNEKAIGDTFKEEILSLVANKKIDEA 60
Query: 71 -TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+C S K + +A+ ++ + +KG + +QD + ++ I +E
Sbjct: 61 KNLCASKK--------SCVAAAVKKFLEKAEKG----MEVQDYEFILKEITI-QETSPYE 107
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISILLGLCV 188
+L+ L S+ S ++G+LG V GM+ F +I+ Y + + + GI E+L++ GL +
Sbjct: 108 SRLNLLASIISISPMLGLLGTVTGMIKAFTNISKYGAGDAAIVADGIAEALLTTAAGLMI 167
Query: 189 SIPSSIAYN 197
+IP + YN
Sbjct: 168 AIPVIVVYN 176
>gi|261399992|ref|ZP_05986117.1| biopolymer transport protein ExbB [Neisseria lactamica ATCC 23970]
gi|313667886|ref|YP_004048170.1| biopolymer transport protein [Neisseria lactamica ST-640]
gi|269210457|gb|EEZ76912.1| biopolymer transport protein ExbB [Neisseria lactamica ATCC 23970]
gi|313005348|emb|CBN86781.1| biopolymer transport protein [Neisseria lactamica 020-06]
Length = 220
Score = 44.7 bits (104), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/209 (18%), Positives = 90/209 (43%), Gaps = 15/209 (7%)
Query: 27 IITLLFIFSILSWSVIIQKSVNFITLRRQ----FREFEQLFWSGQSLETVCKSLKNHHNI 82
+ L+ + SI++W +I+ + + R+ R G ++E V +
Sbjct: 17 VFVLMLLMSIVTWCLIVLRCIKLYQARKGNAAVKRHMSDTLPLGDAVEKVRAV-----DA 71
Query: 83 GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSF----LGSM 138
L+ + A+ ++ + + S + ++ + + I + +I + + L S+
Sbjct: 72 PLSKLVQEALQSYR-NYRRSEASELAQALPLNEYLVIQIRNSMAQIMRRFDYGMTALASI 130
Query: 139 SSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCVSIPSSIAYN 197
+ +G+ G V G+ +I ++ ++ G I E+L++ GL V+IP+ +AYN
Sbjct: 131 GATAPFIGLFGTVWGIYHALINIGQSGQMSIAAVAGPIGEALVATAAGLFVAIPAVLAYN 190
Query: 198 KFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+K A ++ A++ L Q +
Sbjct: 191 FLNRGTKTLAQDLDAMAHDLHVRLLNQKD 219
>gi|224826272|ref|ZP_03699374.1| MotA/TolQ/ExbB proton channel [Lutiella nitroferrum 2002]
gi|224601373|gb|EEG07554.1| MotA/TolQ/ExbB proton channel [Lutiella nitroferrum 2002]
Length = 209
Score = 44.7 bits (104), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 85/203 (41%), Gaps = 24/203 (11%)
Query: 39 WSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKS 98
W++I+ ++ + +F Q + Q L + ++L+ + G + +
Sbjct: 15 WAIIVASVISLTIIFERFFSLRQSLVAPQGL--LGQTLQEYRRAGATQELLQLL------ 66
Query: 99 CDKGARSPIGI--------QDRIDRMMDVAIARE----LEEITEKLSFLGSMSSAGLLVG 146
G SP+G D +M +I E ++ L+ LG++++ L+G
Sbjct: 67 ---GQHSPLGRLFAAGLRNADASREVMKESIEDEGRLVAHQLERYLTTLGTIAAMAPLLG 123
Query: 147 ILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKF 206
+LG V+GM+ F S A +N GI +L + GL V+IPS + Y F
Sbjct: 124 LLGTVIGMIEIFGSQAPSGTNPTELAHGISVALYNTAFGLIVAIPSMMFYRHFRAQVDAL 183
Query: 207 AMQMEGFANEFSAIL-SRQTEGN 228
+ ME A + +L + GN
Sbjct: 184 LVDMESQAVKLVEVLHGERKNGN 206
>gi|291287517|ref|YP_003504333.1| MotA/TolQ/ExbB proton channel [Denitrovibrio acetiphilus DSM 12809]
gi|290884677|gb|ADD68377.1| MotA/TolQ/ExbB proton channel [Denitrovibrio acetiphilus DSM 12809]
Length = 459
Score = 44.7 bits (104), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 47/84 (55%), Gaps = 3/84 (3%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQ--SIAGYYSN 167
Q+ I+ M AI REL + L L +++ L+G+LG V GM+ F +I G
Sbjct: 338 QEVIENAMQEAILRELPRMERFLPTLNILAAVAPLLGLLGTVTGMINTFNILTIFGTGDP 397
Query: 168 NVVSIPGIIESLISILLGLCVSIP 191
++S GI E+L++ LGL V+IP
Sbjct: 398 RMMS-GGISEALVTTQLGLAVAIP 420
>gi|224372375|ref|YP_002606747.1| exbb\tolq family transport protein [Nautilia profundicola AmH]
gi|223589887|gb|ACM93623.1| exbb\tolq family transport protein [Nautilia profundicola AmH]
Length = 182
Score = 44.7 bits (104), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 63/126 (50%), Gaps = 10/126 (7%)
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMM-DVAIARELE 126
SL + K K N L + +S +S K+ DK D I+ + D I
Sbjct: 38 SLTSWIKKEKESLNALLMSGNISGVSSLKRCIDK--------SDNINSLTFDACIQAART 89
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGL 186
E ++FLG ++S +G+ G V+G++ F S+ + N+++ P I ++L++ +G+
Sbjct: 90 EAESGITFLGIVASTAPFIGLFGTVIGILTAFSSMQSVTTINMIA-PAIADALVATAVGI 148
Query: 187 CVSIPS 192
V++P+
Sbjct: 149 IVAVPA 154
>gi|294650555|ref|ZP_06727912.1| biopolymer transport protein TolQ [Acinetobacter haemolyticus ATCC
19194]
gi|292823552|gb|EFF82398.1| biopolymer transport protein TolQ [Acinetobacter haemolyticus ATCC
19194]
Length = 209
Score = 44.7 bits (104), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 101/204 (49%), Gaps = 21/204 (10%)
Query: 31 LFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLK----NHHNIGLAA 86
L + SI + ++II++ +I L+R + L G +E V +L+ NH +G
Sbjct: 15 LILSSIFTVAIIIER---YIRLKRSQVLPQALLVKGADVENVVLTLEQPEINHSALGR-- 69
Query: 87 IFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVG 146
+ A + + ++ AR+ M+ + E+ + + ++FLG++ + L+G
Sbjct: 70 -ILKAGYDHQDQGEQFARA----------QMEATASEEITHLEKNINFLGTLGAIAPLLG 118
Query: 147 ILGAVLGMMGFFQSI-AGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKK 205
+LG VLG++ F + G N + +PGI +LI+ +G+ ++IP+ IAY F +
Sbjct: 119 LLGTVLGIIEAFLVVDVGSAGNASMMMPGISTALITTAVGMLIAIPAMIAYRYFQRVVHE 178
Query: 206 FAMQMEGFANEFSAILSRQTEGNI 229
+ ++E + F A L + ++
Sbjct: 179 YVAELEQQSTLFHAALFHKKTPHV 202
>gi|254442177|ref|ZP_05055653.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Verrucomicrobiae bacterium DG1235]
gi|198256485|gb|EDY80793.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Verrucomicrobiae bacterium DG1235]
Length = 439
Score = 44.7 bits (104), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 79/159 (49%), Gaps = 26/159 (16%)
Query: 87 IFMSAMSEWKKSCDKGARSPIG--IQ-----DRID-------RMMDVAIARELEEITEKL 132
I + M + K K +P+G I+ DR D +D AI +E ++ L
Sbjct: 284 IVQAKMKKQLKDLSKPGSNPVGRIIKVFQSFDRPDVSVETLELKIDEAILKETPQLEGGL 343
Query: 133 SFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISILLGLCVSIP 191
S + +++ L+G+LG V+GM+ FQSI + + + + GI ++L++ +LGL +IP
Sbjct: 344 STIKILAAIAPLLGLLGTVVGMIATFQSITLFGTGDPKLMAGGISQALVTTVLGLIAAIP 403
Query: 192 SSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
+ ++ F ++G +N AI+ Q+ G I+
Sbjct: 404 LVLIHS-F----------LQGISNRCIAIIEEQSAGLIA 431
>gi|32471265|ref|NP_864258.1| biopolymer transport ExbB-related protein [Rhodopirellula baltica
SH 1]
gi|32396967|emb|CAD71937.1| probable biopolymer transport ExbB-related protein [Rhodopirellula
baltica SH 1]
Length = 351
Score = 44.7 bits (104), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 86/202 (42%), Gaps = 26/202 (12%)
Query: 30 LLFIFSILSWSVIIQKSVNFITLRRQ-------FREFEQLFWSGQSLETVCKSLKNHHNI 82
L+ +I S V+ I+LRR R F + GQ S+ + +
Sbjct: 143 LMIPLAICSLIVLGLSMERLISLRRSRVIPKPFVRRFTECVEDGQLSYEEATSICDEFDC 202
Query: 83 GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAG 142
+A +F +A+ W + + ++ I DR+ + + L ++S+
Sbjct: 203 PVAEVFHAAVRRWGRPMLEIEQAVIDAGDRVG-----------DSLRRFLRVFHAISNVT 251
Query: 143 LLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIE 201
L+G+LG VLGM+ F++IA + + GI +L++ GL V+IP+ +AY
Sbjct: 252 PLIGLLGTVLGMIQAFETIADPSAGESDLLASGISTALMTTAGGLSVAIPAYLAY----- 306
Query: 202 DSKKFAMQMEGFANEFSAILSR 223
F + +G+ E + R
Sbjct: 307 --MYFGAKSDGYLGEIDKLCQR 326
>gi|95930818|ref|ZP_01313550.1| MotA/TolQ/ExbB proton channel [Desulfuromonas acetoxidans DSM 684]
gi|95133166|gb|EAT14833.1| MotA/TolQ/ExbB proton channel [Desulfuromonas acetoxidans DSM 684]
Length = 470
Score = 44.7 bits (104), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 59/115 (51%), Gaps = 17/115 (14%)
Query: 93 SEWKKSCDK---GARSPI------GIQDR------IDRMMDVAIARELEEITEKLSFLGS 137
+W+ +C K G +P+ GI R ++ ++ AI +EL + L L
Sbjct: 322 DDWE-ACQKLIEGRSTPVYNVVRAGISARHEEREILESILQEAILKELPRLERALPLLNI 380
Query: 138 MSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIE-SLISILLGLCVSIP 191
M++ L+G+LG V GM+ F+ I Y + + + G I +L++ +LGL V+IP
Sbjct: 381 MAAIAPLLGLLGTVTGMISTFEIINIYGTGDPRMMSGGISVALVTTMLGLVVAIP 435
>gi|89900323|ref|YP_522794.1| MotA/TolQ/ExbB proton channel [Rhodoferax ferrireducens T118]
gi|89345060|gb|ABD69263.1| MotA/TolQ/ExbB proton channel [Rhodoferax ferrireducens T118]
Length = 300
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 1/93 (1%)
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCV 188
E LS L ++ S VG+ G V G+ +I ++ + G + E+LI LGL V
Sbjct: 191 EGLSVLATIGSTAPFVGLFGTVWGIYNALVTIGVSGQASIEKVAGPVGEALIMTALGLAV 250
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
++P+ + YN + ++ ++GF +E +L
Sbjct: 251 AVPAVLGYNWLVRRNRVTLHAVKGFGSELHTLL 283
>gi|327539542|gb|EGF26152.1| biopolymer transport ExbB-related protein [Rhodopirellula baltica
WH47]
Length = 351
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 86/202 (42%), Gaps = 26/202 (12%)
Query: 30 LLFIFSILSWSVIIQKSVNFITLRRQ-------FREFEQLFWSGQSLETVCKSLKNHHNI 82
L+ +I S V+ I+LRR R F + GQ S+ + +
Sbjct: 143 LMIPLAICSLIVLGLSMERLISLRRSRVIPKPFVRRFTECVEDGQLSYEEATSICDEFDC 202
Query: 83 GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAG 142
+A +F +A+ W + + ++ I DR+ + + L ++S+
Sbjct: 203 PVAEVFHAAVRRWGRPMLEIEQAVIDAGDRVG-----------DSLRRFLRVFHAISNVT 251
Query: 143 LLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIE 201
L+G+LG VLGM+ F++IA + + GI +L++ GL V+IP+ +AY
Sbjct: 252 PLIGLLGTVLGMIQAFETIADPSAGESDLLASGISTALMTTAGGLSVAIPAYLAY----- 306
Query: 202 DSKKFAMQMEGFANEFSAILSR 223
F + +G+ E + R
Sbjct: 307 --MYFGAKSDGYLGEIDKLCQR 326
>gi|312143690|ref|YP_003995136.1| MotA/TolQ/ExbB proton channel [Halanaerobium sp. 'sapolanicus']
gi|311904341|gb|ADQ14782.1| MotA/TolQ/ExbB proton channel [Halanaerobium sp. 'sapolanicus']
Length = 205
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 86/194 (44%), Gaps = 22/194 (11%)
Query: 31 LFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLET--VCKSLKNHHNIGLAA-I 87
L IF + S+I I + R+ ++ F++ Q+ E + K N G+ A I
Sbjct: 22 LVIFMVFERSIIYFLKYRSIKKTKYLRDIKE-FYNDQADEDNLIVK------NKGITAQI 74
Query: 88 FMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGI 147
+ + +S KK +K ++ MD +L E+ L L ++ A +G+
Sbjct: 75 YNAVLS--KKPVNK---------EQFQLFMDAEEVDKLPELERGLGLLNFLAQASPTLGL 123
Query: 148 LGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFA 207
LG V GM+ FQ + S +++ GI E+L + GL +S+P+ Y+ F K
Sbjct: 124 LGTVSGMINTFQVLGIGGSPEQMAV-GISEALFTTAAGLVISLPALAFYHYFYSKIDKLV 182
Query: 208 MQMEGFANEFSAIL 221
QM+ E +L
Sbjct: 183 NQMDNLRLETKNLL 196
>gi|268679357|ref|YP_003303788.1| tonB-system energizer ExbB [Sulfurospirillum deleyianum DSM 6946]
gi|268617388|gb|ACZ11753.1| tonB-system energizer ExbB [Sulfurospirillum deleyianum DSM 6946]
Length = 142
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 53/89 (59%), Gaps = 7/89 (7%)
Query: 115 RMMDVAIARELE----EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNN 168
R MDV + R +E ++T+ L+ L +SS VG+LG V+G+M F + AG +
Sbjct: 35 RRMDVTMYRVMEILENDLTKNLTALSIISSNAPYVGLLGTVIGIMITFYDMGQAGEIESK 94
Query: 169 VVSIPGIIESLISILLGLCVSIPSSIAYN 197
V+ I G+ +L + LGL V+IPS +AY+
Sbjct: 95 VILI-GLSLALKATALGLVVAIPSLMAYS 122
>gi|254444893|ref|ZP_05058369.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Verrucomicrobiae bacterium DG1235]
gi|198259201|gb|EDY83509.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Verrucomicrobiae bacterium DG1235]
Length = 469
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 56/110 (50%), Gaps = 1/110 (0%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
Q+ + M+ I R + L L + ++ L+G+LG V+GM+ F I + + +
Sbjct: 347 QETLLDAMESCILRHRPRLERFLPILATTAAVAPLMGLLGTVVGMIKTFTLIEVFGTGDA 406
Query: 170 VSIP-GIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFS 218
S+ GI E+L++ LGL V+IP+ I + F + ME A +FS
Sbjct: 407 KSLSSGISEALVTTELGLIVAIPALIFHGIFTRIMRSRLGTMEQVAADFS 456
>gi|103486299|ref|YP_615860.1| MotA/TolQ/ExbB proton channel [Sphingopyxis alaskensis RB2256]
gi|98976376|gb|ABF52527.1| MotA/TolQ/ExbB proton channel [Sphingopyxis alaskensis RB2256]
Length = 273
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 74/164 (45%), Gaps = 7/164 (4%)
Query: 55 QFREFEQLFWSGQSL-ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRI 113
Q + + FW +L + K KN + + A E K D P+ D +
Sbjct: 82 QGKTVDANFWRAPTLADGAAKLEKNSAYRQVVEDGLRANEEHNKLTD-----PVEAHDWM 136
Query: 114 DRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP 173
++ + ++ L+FL ++ S +G+ G V+G++ I ++ ++
Sbjct: 137 HGTLERSQNHINSKLNSGLAFLATVGSTAPFIGLFGTVIGILRALVKIGASGQASIDTVA 196
Query: 174 GII-ESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANE 216
G + E+LI +GL V++P+ +A+N +K A ++ F+N+
Sbjct: 197 GPVGEALIMTAIGLIVAVPAVLAFNWLQSRNKMIARRLSIFSND 240
>gi|296314376|ref|ZP_06864317.1| biopolymer transport protein ExbB [Neisseria polysaccharea ATCC
43768]
gi|296838933|gb|EFH22871.1| biopolymer transport protein ExbB [Neisseria polysaccharea ATCC
43768]
Length = 220
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 39/209 (18%), Positives = 90/209 (43%), Gaps = 15/209 (7%)
Query: 27 IITLLFIFSILSWSVIIQKSVNFITLRRQ----FREFEQLFWSGQSLETVCKSLKNHHNI 82
+ L+ + SI++W +I+ + + R+ R G ++E V +
Sbjct: 17 VFVLMLLMSIVTWCLIVLRCIKLYQARKGNAAVKRHMSDTLPLGDAVEKVRAV-----DA 71
Query: 83 GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSF----LGSM 138
L+ + A+ ++ + + S + ++ + + I + +I + + L S+
Sbjct: 72 PLSKLVQEALQSYR-NYRRSEASELAQALPLNEYLVIQIRNSMAQIMRRFDYGMTALASI 130
Query: 139 SSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCVSIPSSIAYN 197
+ +G+ G V G+ +I ++ ++ G I E+L++ GL V+IP+ +AYN
Sbjct: 131 GATAPFIGLFGTVWGIYHALINIGQSGQMSIAAVAGPIGEALVATAAGLFVAIPAVLAYN 190
Query: 198 KFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+K A ++ A++ L Q +
Sbjct: 191 FLNRGTKTLAQDLDAMAHDLHVRLLNQKD 219
>gi|237750493|ref|ZP_04580973.1| TonB transporter [Helicobacter bilis ATCC 43879]
gi|229374023|gb|EEO24414.1| TonB transporter [Helicobacter bilis ATCC 43879]
Length = 144
Score = 44.3 bits (103), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 52/87 (59%), Gaps = 4/87 (4%)
Query: 122 ARELEE-ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESL 179
+ELEE +++ L+ L + S VG+LG V+G+M F + G + +V SI G+ +L
Sbjct: 45 VKELEEDVSKNLTLLYIVYSNAPYVGLLGTVVGIMIVFYDMGGSGNIDVKSITLGLSMAL 104
Query: 180 ISILLGLCVSIPSSIAYNKF--IEDSK 204
+ LGL V+IP+ + YN F + D+K
Sbjct: 105 KATALGLVVAIPTLMIYNAFLRVADTK 131
>gi|225164268|ref|ZP_03726539.1| MotA/TolQ/ExbB proton channel [Opitutaceae bacterium TAV2]
gi|224801110|gb|EEG19435.1| MotA/TolQ/ExbB proton channel [Opitutaceae bacterium TAV2]
Length = 253
Score = 44.3 bits (103), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 64/148 (43%), Gaps = 17/148 (11%)
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
TVC+ +AA+ +A+ + D R +QD A EL +
Sbjct: 65 TVCEETPGP----VAAVVKAALIH---AGDDETRMRYAVQD--------AAVIELPSLER 109
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGLCV 188
+L + +++ LVG+LG VLG+ F S G Y+ G+ +SLI+ GL +
Sbjct: 110 RLGSIAAIAQIAPLVGLLGTVLGLTATFHSFMQGGEYATARALAGGMWQSLITAGAGLAL 169
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANE 216
IP+ +AY+ + +E NE
Sbjct: 170 GIPAHLAYHLLNGRVRAIVRDVEWAGNE 197
>gi|91225002|ref|ZP_01260261.1| putative TolR [Vibrio alginolyticus 12G01]
gi|91190248|gb|EAS76518.1| putative TolR [Vibrio alginolyticus 12G01]
Length = 453
Score = 44.3 bits (103), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV- 169
+ ++ +D I R I +S + +S L+G+LG V+GM+G FQ+I + + +
Sbjct: 333 EDLEAKLDEIILRNAPSIERFISSIKLFASVAPLLGLLGTVMGMIGTFQAITLFGTGDPK 392
Query: 170 VSIPGIIESLISILLGLCVSIP 191
+ GI E+L++ +LGL V+IP
Sbjct: 393 LMAGGISEALVTTMLGLVVAIP 414
>gi|254228577|ref|ZP_04922002.1| transporter, MotA/TolQ/ExbB proton channel family protein [Vibrio
sp. Ex25]
gi|262392631|ref|YP_003284485.1| MotA/TolQ/ExbB proton channel family protein [Vibrio sp. Ex25]
gi|151938959|gb|EDN57792.1| transporter, MotA/TolQ/ExbB proton channel family protein [Vibrio
sp. Ex25]
gi|262336225|gb|ACY50020.1| MotA/TolQ/ExbB proton channel family protein [Vibrio sp. Ex25]
Length = 453
Score = 44.3 bits (103), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV- 169
+ ++ +D I R I +S + +S L+G+LG V+GM+G FQ+I + + +
Sbjct: 333 EDLEAKLDEIILRNAPSIERFISSIKLFASVAPLLGLLGTVMGMIGTFQAITLFGTGDPK 392
Query: 170 VSIPGIIESLISILLGLCVSIP 191
+ GI E+L++ +LGL V+IP
Sbjct: 393 LMAGGISEALVTTMLGLVVAIP 414
>gi|269965896|ref|ZP_06179989.1| putative TolR [Vibrio alginolyticus 40B]
gi|269829449|gb|EEZ83690.1| putative TolR [Vibrio alginolyticus 40B]
Length = 453
Score = 44.3 bits (103), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV- 169
+ ++ +D I R I +S + +S L+G+LG V+GM+G FQ+I + + +
Sbjct: 333 EDLEAKLDEIILRNAPSIERFISSIKLFASVAPLLGLLGTVMGMIGTFQAITLFGTGDPK 392
Query: 170 VSIPGIIESLISILLGLCVSIP 191
+ GI E+L++ +LGL V+IP
Sbjct: 393 LMAGGISEALVTTMLGLVVAIP 414
>gi|120437235|ref|YP_862921.1| MotA/TolQ/ExbB family biopolymer transport protein [Gramella
forsetii KT0803]
gi|117579385|emb|CAL67854.1| MotA/TolQ/ExbB family biopolymer transport protein [Gramella
forsetii KT0803]
Length = 233
Score = 44.3 bits (103), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 54/103 (52%), Gaps = 4/103 (3%)
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA---GYYSNNVVSIPGIIESLI 180
E+ ++ + +S L +++ A ++G LG V+GM+ F +A G ++ GI ++
Sbjct: 130 EVYKLEKNVSILATIAGAAPMIGFLGTVIGMVLAFHELATSSGQAQMGALA-EGIYTAMT 188
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
+ + GL V I + I YN + + K QME A +F +L+
Sbjct: 189 TTVAGLIVGIIAYIGYNHLVVKTDKVVHQMEATAVDFLDLLNE 231
>gi|285018587|ref|YP_003376298.1| biopolymer transport exbb transmembrane protein [Xanthomonas
albilineans GPE PC73]
gi|283473805|emb|CBA16308.1| probable biopolymer transport exbb transmembrane protein
[Xanthomonas albilineans]
Length = 249
Score = 44.3 bits (103), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISILLGLCVSI 190
L+ LG+++SAG L+G+LG V+GM+ F I + +V + GI ++L+ G+ +++
Sbjct: 133 LNTLGTVASAGPLLGLLGTVVGMIQMFLGILDHGVGDVNQLAGGIGKALVCTATGMIIAV 192
Query: 191 PSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
P+ I + F + ++ME A + L
Sbjct: 193 PALIFHRHFKSRIAGYIIEMEQEATALTDALE 224
>gi|317152292|ref|YP_004120340.1| MotA/TolQ/ExbB proton channel [Desulfovibrio aespoeensis Aspo-2]
gi|316942543|gb|ADU61594.1| MotA/TolQ/ExbB proton channel [Desulfovibrio aespoeensis Aspo-2]
Length = 206
Score = 44.3 bits (103), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 100/205 (48%), Gaps = 27/205 (13%)
Query: 27 IITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAA 86
I+ L + S++ W++ I K + F++ RR+ R E+ + VCK+ GLA
Sbjct: 20 IMLPLLVISLVMWTLAIVKGLRFLSERRRERTPERCLDLFRGEAGVCKA-------GLAQ 72
Query: 87 IFMSAMSEW-KKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGS---MSSAG 142
+S++ ++ CD P +D +D M R +EI + + ++G+ +S+
Sbjct: 73 WQWDILSQYLEQRCD----DPELNRDMLDAM------RMRQEI-KAMRYIGTILLLSAVA 121
Query: 143 LLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISILLGLCVSIPSSIAYNKFIE 201
L+G+LG V GM+ F I+ + N ++ GI E+L++ GL V++P + +
Sbjct: 122 PLLGLLGTVTGMITTFDVISELGTGNARALASGISEALVTTQSGLVVAVPGLVLGGFLFQ 181
Query: 202 DSKKFAMQMEGFANEFSAILSRQTE 226
++K M+G F L QTE
Sbjct: 182 RAQK----MKGRMELFCIGLQHQTE 202
>gi|110833914|ref|YP_692773.1| MotA/TolQ/ExbB proton channel family protein [Alcanivorax
borkumensis SK2]
gi|110647025|emb|CAL16501.1| MotA/TolQ/ExbB proton channel family protein [Alcanivorax
borkumensis SK2]
Length = 209
Score = 44.3 bits (103), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 53/88 (60%), Gaps = 1/88 (1%)
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISIL 183
+ E+ + LS LGS+++ L+G+LG V+GM+ F +I + + + + GI ++L++
Sbjct: 100 VHELEKFLSTLGSIAAITPLLGLLGTVVGMIDVFAAIMIHGTGDAAQLAGGISQALLTTA 159
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQME 211
GL V+IP+ + F+ ++ +++E
Sbjct: 160 AGLVVAIPAIFFHRFFVRRVEEITVELE 187
>gi|29348078|ref|NP_811581.1| MotA/TolQ/ExbB proton channel [Bacteroides thetaiotaomicron
VPI-5482]
gi|253572580|ref|ZP_04849982.1| MotA/TolQ/ExbB proton channel [Bacteroides sp. 1_1_6]
gi|298387768|ref|ZP_06997318.1| MotA/TolQ/ExbB proton channel family protein [Bacteroides sp.
1_1_14]
gi|29339981|gb|AAO77775.1| MotA/TolQ/ExbB proton channel [Bacteroides thetaiotaomicron
VPI-5482]
gi|251837995|gb|EES66084.1| MotA/TolQ/ExbB proton channel [Bacteroides sp. 1_1_6]
gi|298259373|gb|EFI02247.1| MotA/TolQ/ExbB proton channel family protein [Bacteroides sp.
1_1_14]
Length = 265
Score = 44.3 bits (103), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 58/107 (54%), Gaps = 11/107 (10%)
Query: 119 VAIARELEEIT--------EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI-AGYYSNNV 169
+AI +ELEE T + L + ++++ G L+G+LG V+GM+ F ++ AG ++++
Sbjct: 150 LAIQKELEEATALEMPMMQQNLPIIATITTLGTLMGLLGTVIGMIRSFAALSAGGGADSM 209
Query: 170 VSIPGIIESLISILLGLCVSIPSSIAYNKFIE--DSKKFAMQMEGFA 214
GI E+LI+ G+ + I+YN F D + + GF+
Sbjct: 210 ALSQGISEALINTAFGILTGALAVISYNYFTNKIDKLTYGLDEVGFS 256
>gi|28896940|ref|NP_796545.1| putative TolR [Vibrio parahaemolyticus RIMD 2210633]
gi|153837881|ref|ZP_01990548.1| TolR [Vibrio parahaemolyticus AQ3810]
gi|260365871|ref|ZP_05778365.1| biopolymer transport protein [Vibrio parahaemolyticus K5030]
gi|260877842|ref|ZP_05890197.1| biopolymer transport protein [Vibrio parahaemolyticus AN-5034]
gi|260895509|ref|ZP_05904005.1| biopolymer transport protein [Vibrio parahaemolyticus Peru-466]
gi|260902533|ref|ZP_05910928.1| biopolymer transport protein [Vibrio parahaemolyticus AQ4037]
gi|28805148|dbj|BAC58429.1| putative TolR [Vibrio parahaemolyticus RIMD 2210633]
gi|149748744|gb|EDM59589.1| TolR [Vibrio parahaemolyticus AQ3810]
gi|308088587|gb|EFO38282.1| biopolymer transport protein [Vibrio parahaemolyticus Peru-466]
gi|308089863|gb|EFO39558.1| biopolymer transport protein [Vibrio parahaemolyticus AN-5034]
gi|308109699|gb|EFO47239.1| biopolymer transport protein [Vibrio parahaemolyticus AQ4037]
gi|308113413|gb|EFO50953.1| biopolymer transport protein [Vibrio parahaemolyticus K5030]
Length = 453
Score = 44.3 bits (103), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV- 169
+ ++ +D I R I +S + +S L+G+LG V+GM+G FQ+I + + +
Sbjct: 333 EDLEAKLDEIILRNAPSIERFISSIKLFASVAPLLGLLGTVMGMIGTFQAITLFGTGDPK 392
Query: 170 VSIPGIIESLISILLGLCVSIP 191
+ GI E+L++ +LGL V+IP
Sbjct: 393 LMAGGISEALVTTMLGLVVAIP 414
>gi|328471717|gb|EGF42594.1| biopolymer transport protein ExbB [Vibrio parahaemolyticus 10329]
Length = 453
Score = 44.3 bits (103), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV- 169
+ ++ +D I R I +S + +S L+G+LG V+GM+G FQ+I + + +
Sbjct: 333 EDLEAKLDEIILRNAPSIERFISSIKLFASVAPLLGLLGTVMGMIGTFQAITLFGTGDPK 392
Query: 170 VSIPGIIESLISILLGLCVSIP 191
+ GI E+L++ +LGL V+IP
Sbjct: 393 LMAGGISEALVTTMLGLVVAIP 414
>gi|254429386|ref|ZP_05043093.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Alcanivorax sp. DG881]
gi|196195555|gb|EDX90514.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Alcanivorax sp. DG881]
Length = 205
Score = 44.3 bits (103), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 53/88 (60%), Gaps = 1/88 (1%)
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISIL 183
+ E+ + LS LGS+++ L+G+LG V+GM+ F +I + + + + GI ++L++
Sbjct: 96 VHELEKFLSTLGSIAAITPLLGLLGTVVGMIDVFAAIMIHGTGDAAQLAGGISQALLTTA 155
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQME 211
GL V+IP+ + F+ ++ +++E
Sbjct: 156 AGLVVAIPAIFFHRFFVRRVEEITVELE 183
>gi|86160725|ref|YP_467510.1| MotA/TolQ/ExbB proton channel [Anaeromyxobacter dehalogenans 2CP-C]
gi|197124827|ref|YP_002136778.1| MotA/TolQ/ExbB proton channel [Anaeromyxobacter sp. K]
gi|220919544|ref|YP_002494848.1| MotA/TolQ/ExbB proton channel [Anaeromyxobacter dehalogenans 2CP-1]
gi|85777236|gb|ABC84073.1| MotA/TolQ/ExbB proton channel [Anaeromyxobacter dehalogenans 2CP-C]
gi|196174676|gb|ACG75649.1| MotA/TolQ/ExbB proton channel [Anaeromyxobacter sp. K]
gi|219957398|gb|ACL67782.1| MotA/TolQ/ExbB proton channel [Anaeromyxobacter dehalogenans 2CP-1]
Length = 224
Score = 44.3 bits (103), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 50/94 (53%), Gaps = 3/94 (3%)
Query: 106 PIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYY 165
P G D + MD A RE +I ++ +L + + L+G+LG ++G++G F ++A
Sbjct: 91 PKGEAD-VQAAMDEATLRESPKIEKRTGYLAMLGNVATLLGLLGTIVGLIGAFGAVANAS 149
Query: 166 SNNVVSI--PGIIESLISILLGLCVSIPSSIAYN 197
+ +I I E++ GL +IP+ +AY+
Sbjct: 150 PADKATILANSISEAMNCTAFGLLTAIPALVAYS 183
>gi|119505773|ref|ZP_01627841.1| MotA/TolQ/ExbB proton channel [marine gamma proteobacterium
HTCC2080]
gi|119458407|gb|EAW39514.1| MotA/TolQ/ExbB proton channel [marine gamma proteobacterium
HTCC2080]
Length = 207
Score = 44.3 bits (103), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 83/178 (46%), Gaps = 18/178 (10%)
Query: 27 IITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFW----SGQSLETVCKSLKNHHNI 82
++ ++ + S+++ + I++SV R W +G+ K+L+ H
Sbjct: 11 VMPVIVLCSVIALGISIERSVALNPDRIAPPHLLANVWKQLKAGELDAQRLKALR--HRS 68
Query: 83 GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAG 142
L AI + ++ + D S IQ+ A + ++ L+ LG++++
Sbjct: 69 PLGAILAAGLANRSQGRDVMKES---IQE--------AAGHVVHDLERYLNTLGTVAAVA 117
Query: 143 LLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISILLGLCVSIPSSIAYNKF 199
L+G+LG V+GM+ F I + N ++ GI E+LI+ GL V+IP+ + + F
Sbjct: 118 PLLGLLGTVVGMIRVFTEITVQGTGNANALAGGISEALITTAAGLVVAIPALVMHRYF 175
>gi|78777739|ref|YP_394054.1| MotA/TolQ/ExbB proton channel [Sulfurimonas denitrificans DSM 1251]
gi|78498279|gb|ABB44819.1| MotA/TolQ/ExbB proton channel [Sulfurimonas denitrificans DSM 1251]
Length = 146
Score = 44.3 bits (103), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 55/104 (52%), Gaps = 6/104 (5%)
Query: 109 IQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA--GYYS 166
++ R+ + + + LE+ +L L + + +G+ G VLG++ F +++ +
Sbjct: 42 VKKRVHELSMIEVRILLEK---RLGVLATFGNNAPFIGLFGTVLGIINAFHTLSRGSEFG 98
Query: 167 NNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQM 210
N V + GI E+L++ GL V+IPS IAYN F+ K + M
Sbjct: 99 VNAV-MGGISEALVATATGLFVAIPSVIAYNYFVRKIKMILLDM 141
>gi|291534027|emb|CBL07140.1| Biopolymer transport proteins [Megamonas hypermegale ART12/1]
Length = 238
Score = 44.3 bits (103), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 74/164 (45%), Gaps = 19/164 (11%)
Query: 65 SGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARE 124
SG++LE + K H A I A SP+ +R + M++
Sbjct: 90 SGETLEKAFEFAKTHKG-ACANILTQA-------------SPLPTVERTEAFMEMKGNIV 135
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISIL 183
+ + EKLS+L +++ L+G+LG ++GM+ F SI + ++I GI E+LI+
Sbjct: 136 MSRLREKLSYLSVITTLAPLLGLLGTIVGMITTF-SIFNIQAGQPMAITGGIGEALIATA 194
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEG 227
GLCV+I S ++ ME FSA+ + G
Sbjct: 195 SGLCVAILSLCVHSYLSHKMNNIITNME---QCFSALSEAKVRG 235
>gi|194288710|ref|YP_002004617.1| biopolymer transport transmembrane protein [Cupriavidus taiwanensis
LMG 19424]
gi|193222545|emb|CAQ68548.1| BIOPOLYMER TRANSPORT TRANSMEMBRANE PROTEIN [Cupriavidus taiwanensis
LMG 19424]
Length = 206
Score = 44.3 bits (103), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 96/204 (47%), Gaps = 24/204 (11%)
Query: 31 LFIFSILSWSVIIQKSVNFITLRRQ-------FREFEQLFWSGQSLETVCKSLKNHHNIG 83
L + S+++ ++I+++ F++L+R + E ++ V +L+ + +G
Sbjct: 15 LLLASVIALALIVER---FLSLKRSKVLPARLYEEALAAAQQRRATPEVVNTLEQNSPLG 71
Query: 84 --LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSA 141
LAA + + S D +D ++ V +A ELE L+ LG+++S
Sbjct: 72 RVLAAGLRHVVLQPHTSRDAA-------KDVVEEAGRV-VAHELERY---LNALGTIASV 120
Query: 142 GLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIE 201
L+G+LG V+GM+ F + G ++ GI +L + GL V+IP+ I + F
Sbjct: 121 APLMGLLGTVIGMIEIFGNQGGTGTSPEQLAHGISVALYNTAFGLIVAIPALIFWRYFRR 180
Query: 202 DSKKFAMQMEGFANEF-SAILSRQ 224
+ ++E A F AIL ++
Sbjct: 181 RVDDYVAELEFRATSFLDAILPQR 204
>gi|156972958|ref|YP_001443865.1| biopolymer transport protein [Vibrio harveyi ATCC BAA-1116]
gi|156524552|gb|ABU69638.1| hypothetical protein VIBHAR_00636 [Vibrio harveyi ATCC BAA-1116]
Length = 453
Score = 44.3 bits (103), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV- 169
+ ++ +D I R I +S + +S L+G+LG V+GM+G FQ+I + + +
Sbjct: 333 EDLEAKLDEIILRNAPSIERFISSIKLFASVAPLLGLLGTVMGMIGTFQAITLFGTGDPK 392
Query: 170 VSIPGIIESLISILLGLCVSIP 191
+ GI E+L++ +LGL V+IP
Sbjct: 393 LMAGGISEALVTTMLGLVVAIP 414
>gi|150003064|ref|YP_001297808.1| putative biopolymer transport protein ExbB [Bacteroides vulgatus
ATCC 8482]
gi|254882347|ref|ZP_05255057.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
gi|294775908|ref|ZP_06741407.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Bacteroides vulgatus PC510]
gi|149931488|gb|ABR38186.1| putative biopolymer transport protein ExbB [Bacteroides vulgatus
ATCC 8482]
gi|254835140|gb|EET15449.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
gi|294450277|gb|EFG18778.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Bacteroides vulgatus PC510]
Length = 238
Score = 44.3 bits (103), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 53/105 (50%), Gaps = 2/105 (1%)
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI--PGIIESLIS 181
E+ ++ L + +++ ++G LG V GM+ F ++ +N +++ GI E++I+
Sbjct: 133 EVAKLENGLPVVATIAGGAPMIGFLGTVTGMVQAFWEMSNAGNNIDITLLSGGIYEAMIT 192
Query: 182 ILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+ GL V I + AYN + K QME +F +L+ +
Sbjct: 193 TVGGLVVGIAAMFAYNYLVTRVDKVVSQMEARTMDFMDLLNEPVQ 237
>gi|311694957|gb|ADP97830.1| MotA/TolQ/ExbB proton channel family protein [marine bacterium
HP15]
Length = 208
Score = 44.3 bits (103), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISILLGLCVSI 190
L+ LG++++ L+G+LG V+GM+ F I N ++ GI E+LI+ GL V+I
Sbjct: 107 LNPLGTVATITPLLGLLGTVIGMIKVFAEIQLAGVGNAGNLAGGISEALITTAAGLSVAI 166
Query: 191 PSSIAYNKFIEDSKKFAMQME 211
P+ I + FI + + ME
Sbjct: 167 PALICHRYFIRRVDELVVGME 187
>gi|325107035|ref|YP_004268103.1| MotA/TolQ/ExbB proton channel [Planctomyces brasiliensis DSM 5305]
gi|324967303|gb|ADY58081.1| MotA/TolQ/ExbB proton channel [Planctomyces brasiliensis DSM 5305]
Length = 285
Score = 44.3 bits (103), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 53/99 (53%), Gaps = 17/99 (17%)
Query: 112 RIDRMMDVAIARELEEITE--------KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAG 163
R+DR A+ ++E+ E +LS+L +SS ++G++G V GM+ FQ IA
Sbjct: 157 RLDRGYASAV-EGMQEVGEEENMNYEHRLSYLALISSIAPMIGLMGTVYGMILSFQKIA- 214
Query: 164 YYSNNVVSIP-----GIIESLISILLGLCVSIPSSIAYN 197
+ V P GI +L + L GL V+IP+ IAY+
Sbjct: 215 --TATVAPKPSELADGISTALFTTLEGLAVAIPAMIAYS 251
>gi|167751915|ref|ZP_02424042.1| hypothetical protein ALIPUT_00157 [Alistipes putredinis DSM 17216]
gi|167660156|gb|EDS04286.1| hypothetical protein ALIPUT_00157 [Alistipes putredinis DSM 17216]
Length = 224
Score = 44.3 bits (103), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 53/105 (50%), Gaps = 2/105 (1%)
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI--PGIIESLIS 181
E+ ++ L L +++ ++G LG V+GM+ F +A +S+ G+ ++I+
Sbjct: 119 EVSKLETNLPILATIAGGAPMIGFLGTVVGMVQTFMDMAAAGGTVDMSLLSSGMYVAMIT 178
Query: 182 ILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+ GL V IP+ YN + +K +ME + F IL++ +
Sbjct: 179 TVGGLLVGIPAYFGYNYLVARIEKLVFRMEANSIAFMDILNQPVQ 223
>gi|163802271|ref|ZP_02196166.1| putative TolR [Vibrio sp. AND4]
gi|159174076|gb|EDP58886.1| putative TolR [Vibrio sp. AND4]
Length = 453
Score = 44.3 bits (103), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 42/62 (67%), Gaps = 4/62 (6%)
Query: 134 FLGSM---SSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVS 189
F+GS+ +S L+G+LG V+GM+G FQ+I + + + + GI E+L++ +LGL V+
Sbjct: 353 FIGSIKLFASVAPLLGLLGTVMGMIGTFQAITLFGTGDPKLMAGGISEALVTTMLGLVVA 412
Query: 190 IP 191
IP
Sbjct: 413 IP 414
>gi|85860614|ref|YP_462816.1| tolQ protein [Syntrophus aciditrophicus SB]
gi|85723705|gb|ABC78648.1| tolQ protein [Syntrophus aciditrophicus SB]
Length = 144
Score = 44.3 bits (103), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 3/86 (3%)
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA--GYYSNNVVSIPGIIESLISILLG 185
+T KL + ++ S +G+LG V G+M F S+ G+ + + G+ +L + +G
Sbjct: 52 LTRKLHLIATIGSNAPYIGLLGTVCGIMLTFYSMGRDGFMDTGKIMV-GLALALKATAVG 110
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQME 211
LCV+IPS + YN + K M E
Sbjct: 111 LCVAIPSIVLYNLLLRRVKVLMMNWE 136
>gi|319640601|ref|ZP_07995320.1| biopolymer transporter ExbB [Bacteroides sp. 3_1_40A]
gi|317387771|gb|EFV68631.1| biopolymer transporter ExbB [Bacteroides sp. 3_1_40A]
Length = 237
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 53/105 (50%), Gaps = 2/105 (1%)
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI--PGIIESLIS 181
E+ ++ L + +++ ++G LG V GM+ F ++ +N +++ GI E++I+
Sbjct: 132 EVAKLENGLPVVATIAGGAPMIGFLGTVTGMVQAFWEMSNAGNNIDITLLSGGIYEAMIT 191
Query: 182 ILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+ GL V I + AYN + K QME +F +L+ +
Sbjct: 192 TVGGLVVGIAAMFAYNYLVTRVDKVVSQMEARTMDFMDLLNEPVQ 236
>gi|118588937|ref|ZP_01546344.1| MotA/TolQ/ExbB proton channel [Stappia aggregata IAM 12614]
gi|118438266|gb|EAV44900.1| MotA/TolQ/ExbB proton channel [Stappia aggregata IAM 12614]
Length = 223
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 90/185 (48%), Gaps = 18/185 (9%)
Query: 27 IITLLFIFSILSWSVIIQKSVNFITLR----RQFREFEQLFWSGQSLETVCKSLKNHHNI 82
++ +L SI + +VI+ K+V F T R R+ + SG+ + LK+
Sbjct: 15 VVLILLAISIAAVAVILAKAVQFSTARVGRHGPVRQAVSQWRSGERTKASQNLLKDRSLS 74
Query: 83 GLAAIFMSAMSEWKKSCDKGARSPIG--IQD-RIDRMMDVAIARELEEITEKLSFLGSM- 138
G A+ SAM + D+ P+ ++D R +R+ + AR + + S+L ++
Sbjct: 75 G--ALVRSAMDAIQM-LDQ---QPLSSQVRDIREERLREEISARAADRLFRLASWLKALD 128
Query: 139 --SSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGLCVSIPSSI 194
+ L+G+ G VLGM+ FQ++ +G +N GI +L++ GL V++P SI
Sbjct: 129 LVTQISPLLGLFGTVLGMIETFQTLQESGASANPATLAGGIWVALLTTACGLAVAMPVSI 188
Query: 195 AYNKF 199
A F
Sbjct: 189 AVTWF 193
>gi|292490661|ref|YP_003526100.1| MotA/TolQ/ExbB proton channel [Nitrosococcus halophilus Nc4]
gi|291579256|gb|ADE13713.1| MotA/TolQ/ExbB proton channel [Nitrosococcus halophilus Nc4]
Length = 211
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 50/101 (49%), Gaps = 1/101 (0%)
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGY-YSNNVVSIPGIIESLISILLG 185
E+ L+ LG++++ L+G+LG V+GM+ F I N V GI E+LI+ G
Sbjct: 102 ELERFLNTLGTIAAITPLLGLLGTVIGMIKVFTVINTQGVGNPAVLAGGISEALITTAAG 161
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
L V+IPS + Y F + ME A + ++ E
Sbjct: 162 LAVAIPSLMFYRYFRGKVMALVVDMEEQAIQLVEVMHGDRE 202
>gi|91218299|ref|ZP_01255245.1| putative biopolymer transport protein [Psychroflexus torquis ATCC
700755]
gi|91183574|gb|EAS69971.1| putative biopolymer transport protein [Psychroflexus torquis ATCC
700755]
Length = 229
Score = 43.9 bits (102), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 54/104 (51%), Gaps = 2/104 (1%)
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVS--IPGIIESLIS 181
E+ ++ + +S L +++ A ++G LG V+GM+ F +A + GI ++ +
Sbjct: 126 EVYKLEKNVSVLATIAGAAPMIGFLGTVIGMVLAFHELATSSGQAQMGSLAEGIYTAMTT 185
Query: 182 ILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+ GL V I + IAYN + + K QME A +F +L+ +
Sbjct: 186 TVAGLIVGIIAYIAYNHVVVRTDKVIHQMEATAVDFLDLLNEPS 229
>gi|167564101|ref|ZP_02357017.1| MotA/TolQ/ExbB proton channel family protein [Burkholderia
oklahomensis EO147]
Length = 122
Score = 43.9 bits (102), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Query: 134 FLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCVSIPS 192
L S+ S VG+LG V G+ SIA + ++ G + E+LI GL V+IP+
Sbjct: 14 LLASIGSTAPFVGLLGTVWGIYHALGSIAASGQAQIENVAGPVGEALIMTAFGLVVAIPA 73
Query: 193 SIAYNKFIEDSKKFAMQMEGFANEF 217
+AYN ++ +++GFA +
Sbjct: 74 VLAYNILGRLVRQLVEELDGFARDL 98
>gi|153833914|ref|ZP_01986581.1| TolR [Vibrio harveyi HY01]
gi|148869752|gb|EDL68729.1| TolR [Vibrio harveyi HY01]
Length = 453
Score = 43.9 bits (102), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV- 169
+ ++ +D I R I +S + +S L+G+LG V+GM+G FQ+I + + +
Sbjct: 333 EDLEAKLDEIILRNAPSIERFISSIKLFASVAPLLGLLGTVMGMIGTFQAITLFGTGDPK 392
Query: 170 VSIPGIIESLISILLGLCVSIP 191
+ GI E+L++ +LGL V+IP
Sbjct: 393 LMAGGISEALVTTMLGLVVAIP 414
>gi|254439594|ref|ZP_05053088.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Octadecabacter antarcticus 307]
gi|198255040|gb|EDY79354.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Octadecabacter antarcticus 307]
Length = 211
Score = 43.9 bits (102), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 87/185 (47%), Gaps = 29/185 (15%)
Query: 27 IITLLFIFSILSWSVIIQKSVNFITLR-RQFREFEQLF--WS-GQSLETVCKSLKNHHNI 82
++ +L S++S SVI+ K F+TL Q RE ++ W GQ E L++ + +
Sbjct: 21 VVAILIGLSVVSLSVILWKLWQFMTLGVGQHREIKRAITNWDHGQRDEAKHTLLQSRNAV 80
Query: 83 GLAAIFMSAMSEWKKSCDKGARSPIGIQ-DRIDRMMDVAIARELEEITEKLSFLGSMSSA 141
++ I R I Q RI+ + +AR + L S++
Sbjct: 81 AISLI----------------RGDITAQKSRIEADISAHLAR----LESGFRILDSIAQI 120
Query: 142 GLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKF 199
L+G+ G VLGM+ FQ++ AG + + GI +L++ GL V++P+S+A F
Sbjct: 121 APLLGLFGTVLGMIDAFQALQDAGASVDPSLLAGGIWVALLTTAAGLAVAMPTSLALTYF 180
Query: 200 IEDSK 204
DS+
Sbjct: 181 --DSR 183
>gi|153806019|ref|ZP_01958687.1| hypothetical protein BACCAC_00268 [Bacteroides caccae ATCC 43185]
gi|149130696|gb|EDM21902.1| hypothetical protein BACCAC_00268 [Bacteroides caccae ATCC 43185]
Length = 267
Score = 43.9 bits (102), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 58/107 (54%), Gaps = 11/107 (10%)
Query: 119 VAIARELEEIT--------EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI-AGYYSNNV 169
+AI +ELEE T + L + ++++ G L+G+LG V+GM+ F ++ AG ++++
Sbjct: 152 LAIQKELEEATALEMPMMQQNLPIIATITTLGTLMGLLGTVIGMIRSFAALSAGGGADSM 211
Query: 170 VSIPGIIESLISILLGLCVSIPSSIAYNKFIE--DSKKFAMQMEGFA 214
GI E+LI+ G+ + I+YN F D + + GF+
Sbjct: 212 ALSQGISEALINTAFGILTGALAVISYNYFTNKIDKLTYGLDEVGFS 258
>gi|269959386|ref|ZP_06173769.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|269835823|gb|EEZ89899.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
Length = 453
Score = 43.9 bits (102), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV- 169
+ ++ +D I R I +S + +S L+G+LG V+GM+G FQ+I + + +
Sbjct: 333 EDLEAKLDEIILRNAPSIERFISSIKLFASVAPLLGLLGTVMGMIGTFQAITLFGTGDPK 392
Query: 170 VSIPGIIESLISILLGLCVSIP 191
+ GI E+L++ +LGL V+IP
Sbjct: 393 LMAGGISEALVTTMLGLVVAIP 414
>gi|319786919|ref|YP_004146394.1| MotA/TolQ/ExbB proton channel [Pseudoxanthomonas suwonensis 11-1]
gi|317465431|gb|ADV27163.1| MotA/TolQ/ExbB proton channel [Pseudoxanthomonas suwonensis 11-1]
Length = 220
Score = 43.9 bits (102), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 64/112 (57%), Gaps = 9/112 (8%)
Query: 114 DRMMDVAIARELEEITEK-LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI 172
+R+ D R L E+ L+ LG+++SAG L+G+LG V+GM+ F I + +V +
Sbjct: 90 ERLEDTG--RHLVHRMERFLNALGTIASAGPLLGLLGTVVGMIQMFLGILDHGLGDVNQL 147
Query: 173 P-GIIESLISILLGLCVSIPSSIAYNKFIEDS-KKFAMQMEGFANEFSAILS 222
GI ++L+ G+ V+IP ++A+++F + ++ME E +A+L
Sbjct: 148 AGGIGKALVCTATGMIVAIP-ALAFHRFFRSRIAGYVIEME---EEATALLD 195
>gi|84683928|ref|ZP_01011830.1| MotA/TolQ/ExbB proton channel family protein [Maritimibacter
alkaliphilus HTCC2654]
gi|84667681|gb|EAQ14149.1| MotA/TolQ/ExbB proton channel family protein [Rhodobacterales
bacterium HTCC2654]
Length = 222
Score = 43.9 bits (102), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 36/58 (62%), Gaps = 2/58 (3%)
Query: 144 LVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKF 199
LVG+LG VLGM+ FQ++ AG ++ GI E+L++ G+ V+IP+S A F
Sbjct: 130 LVGLLGTVLGMVAAFQALEAAGSRADPSDLAGGIWEALLTTAAGMAVAIPASAALTWF 187
>gi|95931355|ref|ZP_01314068.1| MotA/TolQ/ExbB proton channel [Desulfuromonas acetoxidans DSM 684]
gi|95132598|gb|EAT14284.1| MotA/TolQ/ExbB proton channel [Desulfuromonas acetoxidans DSM 684]
Length = 480
Score = 43.9 bits (102), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 43/74 (58%), Gaps = 3/74 (4%)
Query: 120 AIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA--GYYSNNVVSIPGIIE 177
AI E+ + LS L ++S L+G+LG V GM+ FQ I G ++S GI E
Sbjct: 367 AILGEIPRLERFLSTLAVLASIAPLLGLLGTVTGMINTFQVITFHGTGDPRLMS-SGISE 425
Query: 178 SLISILLGLCVSIP 191
+L++ +LGL V+IP
Sbjct: 426 ALVTTMLGLAVAIP 439
>gi|298207908|ref|YP_003716087.1| putative biopolymer transport protein [Croceibacter atlanticus
HTCC2559]
gi|83850549|gb|EAP88417.1| putative biopolymer transport protein [Croceibacter atlanticus
HTCC2559]
Length = 228
Score = 43.9 bits (102), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 52/102 (50%), Gaps = 2/102 (1%)
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVS--IPGIIESLIS 181
E+ ++ + +S L +++ A ++G LG V+GM+ F +A + GI ++ +
Sbjct: 125 EVYKLEKNVSVLATIAGAAPMIGFLGTVIGMVLAFHQLATSSGQAEMGNLAEGIYTAMTT 184
Query: 182 ILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
+ GL V I + I YN + + K QME A +F +L+
Sbjct: 185 TVAGLIVGIIAYIGYNHLVVKTDKVVHQMEATAVDFLDLLNE 226
>gi|296272106|ref|YP_003654737.1| MotA/TolQ/ExbB proton channel [Arcobacter nitrofigilis DSM 7299]
gi|296096281|gb|ADG92231.1| MotA/TolQ/ExbB proton channel [Arcobacter nitrofigilis DSM 7299]
Length = 437
Score = 43.9 bits (102), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Query: 120 AIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIES 178
AI +E +I + SF+ +++ L+G+LG V GM+ FQ+I + + + + GI +
Sbjct: 333 AILKETTQIKKGQSFVKLLAAVTPLLGLLGTVTGMIATFQAITLFGTGDPKLMAGGISTA 392
Query: 179 LISILLGLCVSIPSSIAY 196
LI+ +LGL +IP AY
Sbjct: 393 LITTVLGLVTAIPLLFAY 410
>gi|91779197|ref|YP_554405.1| biopolymer MotA/TolQ/ExbB proton channel family transporter
[Burkholderia xenovorans LB400]
gi|91691857|gb|ABE35055.1| outer membrane transport energization protein ExbB [Burkholderia
xenovorans LB400]
Length = 214
Score = 43.9 bits (102), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 56/98 (57%), Gaps = 2/98 (2%)
Query: 120 AIARELE-EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIE 177
++A ++E +++ L ++ +A L+G+LG ++GMM FQ G + + G + +
Sbjct: 101 SVASQIERDMSRGFWVLETIVTAAPLLGLLGTIVGMMHSFQLFGGTGLVDPAGVTGGVAQ 160
Query: 178 SLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFAN 215
SL++ +GL V++ + A+N F ++ ++E FAN
Sbjct: 161 SLVATAIGLVVALFALFAFNYFSRRLERLMDELESFAN 198
>gi|225009978|ref|ZP_03700450.1| MotA/TolQ/ExbB proton channel [Flavobacteria bacterium MS024-3C]
gi|225005457|gb|EEG43407.1| MotA/TolQ/ExbB proton channel [Flavobacteria bacterium MS024-3C]
Length = 227
Score = 43.9 bits (102), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 58/115 (50%), Gaps = 2/115 (1%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA--GYYSNN 168
D I+ ++ A E+ ++ + +S L +++ A ++G LG V+GM+ F +A G +
Sbjct: 111 DDINTAIENAGTLEVYKLEKNVSVLATVAGAAPMIGFLGTVIGMILAFHEMATSGGQAEM 170
Query: 169 VVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
GI ++ + + GL V I + I YN + + K ME A +F +L+
Sbjct: 171 GALASGIYTAMTTTVGGLVVGIIAYIGYNHLVNMTNKVVHSMEANAVDFLDLLNE 225
>gi|325286942|ref|YP_004262732.1| MotA/TolQ/ExbB proton channel [Cellulophaga lytica DSM 7489]
gi|324322396|gb|ADY29861.1| MotA/TolQ/ExbB proton channel [Cellulophaga lytica DSM 7489]
Length = 230
Score = 43.9 bits (102), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 58/115 (50%), Gaps = 2/115 (1%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNN 168
D I+ ++ A E+ ++ + +S L +++ A ++G LG V+GM+ F + AG +
Sbjct: 114 DDINTAIENAGTLEVYKLEKNVSVLATVAGAAPMIGFLGTVIGMILAFHEMASAGGQAEM 173
Query: 169 VVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
GI ++ + + GL V I + I YN + + K ME A +F +L+
Sbjct: 174 GSLASGIYTAMTTTVAGLVVGIIAYIGYNHLVNRTGKVVHAMEANAVDFLDLLNE 228
>gi|291286749|ref|YP_003503565.1| MotA/TolQ/ExbB proton channel [Denitrovibrio acetiphilus DSM 12809]
gi|290883909|gb|ADD67609.1| MotA/TolQ/ExbB proton channel [Denitrovibrio acetiphilus DSM 12809]
Length = 207
Score = 43.9 bits (102), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 90/185 (48%), Gaps = 22/185 (11%)
Query: 31 LFIFSILSWSVIIQKSVNFITLR---RQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAI 87
LF S+L ++ ++ +I+ R ++R+ +QL +G+ + K++ N L +
Sbjct: 17 LFFCSLLLITIFFERLWFYISNRSDAEKYRQAKQLVENGRFGDA--KNVLNGSKGALERV 74
Query: 88 FMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGI 147
F+ ++ + S + ++ ++ +EL+ + L + + ++G+
Sbjct: 75 FLEVLNNLRCS-----------RHDLEHIVSNKGVQELQRFNKNLHIMELIGRIAPMLGL 123
Query: 148 LGAVLGMMGFFQSIA---GYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSK 204
G V+GM+ FQ++A G N + GI ESL++ + GL V IP+ I Y+ F K
Sbjct: 124 SGTVVGMVAAFQAVASSTGGAVNPALLASGIWESLLTTVAGLFVGIPALIFYHFF---EK 180
Query: 205 KFAMQ 209
+F ++
Sbjct: 181 QFVIK 185
>gi|304320856|ref|YP_003854499.1| TonB system biopolymer transport component [Parvularcula
bermudensis HTCC2503]
gi|303299758|gb|ADM09357.1| TonB system biopolymer transport component [Parvularcula
bermudensis HTCC2503]
Length = 459
Score = 43.9 bits (102), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 117 MDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGI 175
+D AI REL ++ L+ + +++ L+G+LG V+GM+ FQ I + + + + GI
Sbjct: 350 LDDAILRELPKLEGGLNLVKVLAAIAPLMGLLGTVVGMIVTFQQITLFGTGDPQIMAGGI 409
Query: 176 IESLISILLGLCVSIP 191
++L++ +LGL SIP
Sbjct: 410 SQALVTTVLGLIASIP 425
>gi|294624866|ref|ZP_06703523.1| biopolymer transport ExbB protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|292600825|gb|EFF44905.1| biopolymer transport ExbB protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
Length = 183
Score = 43.9 bits (102), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISILLGLCVSI 190
L+ LG+++SAG L+G+LG V+GM+ F I + +V + GI ++L+ G+ +++
Sbjct: 70 LNALGTIASAGPLLGLLGTVVGMIQMFMGILDHGVGDVNQLAGGIGKALVCTATGMIIAV 129
Query: 191 PSSIAYNKFIEDSKKFAMQME 211
P+ +A+ F + ++ME
Sbjct: 130 PALMAHRFFKGRIAGYIVEME 150
>gi|262275429|ref|ZP_06053239.1| MotA/TolQ/ExbB proton channel family protein [Grimontia hollisae
CIP 101886]
gi|262220674|gb|EEY71989.1| MotA/TolQ/ExbB proton channel family protein [Grimontia hollisae
CIP 101886]
Length = 448
Score = 43.9 bits (102), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 61/120 (50%), Gaps = 13/120 (10%)
Query: 91 AMSEWKKSCDKGARSPIG-----IQDRIDRMMDV-------AIARELEEITEKLSFLGSM 138
A+++ K+ + +P+G + DR +D AI E + + LS L +
Sbjct: 291 AINKQIKTPTQPGNNPLGRILNVYANEPDRSLDTLELRLMEAIMDEQQHFEKGLSMLKLL 350
Query: 139 SSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIE-SLISILLGLCVSIPSSIAYN 197
++ ++G+LG V GM+ FQ I Y + + + G I +L++ ++GL +IP +A+N
Sbjct: 351 AALAPMLGLLGTVTGMIETFQVITQYGNGDPTIMAGGISMALVTTVMGLVAAIPLLLAHN 410
>gi|15605326|ref|NP_220112.1| polysaccharide transporter [Chlamydia trachomatis D/UW-3/CX]
gi|76789334|ref|YP_328420.1| component of a macromolecule transport system [Chlamydia
trachomatis A/HAR-13]
gi|237803024|ref|YP_002888218.1| macromolecule transporter [Chlamydia trachomatis B/Jali20/OT]
gi|237804945|ref|YP_002889099.1| macromolecule transporter [Chlamydia trachomatis B/TZ1A828/OT]
gi|255311417|ref|ZP_05353987.1| macromolecule transporter [Chlamydia trachomatis 6276]
gi|255317718|ref|ZP_05358964.1| macromolecule transporter [Chlamydia trachomatis 6276s]
gi|255348977|ref|ZP_05380984.1| macromolecule transporter [Chlamydia trachomatis 70]
gi|255503516|ref|ZP_05381906.1| macromolecule transporter [Chlamydia trachomatis 70s]
gi|255507194|ref|ZP_05382833.1| macromolecule transporter [Chlamydia trachomatis D(s)2923]
gi|3329040|gb|AAC68198.1| polysaccharide transporter [Chlamydia trachomatis D/UW-3/CX]
gi|76167864|gb|AAX50872.1| component of a macromolecule transport system [Chlamydia
trachomatis A/HAR-13]
gi|231273245|emb|CAX10160.1| macromolecule transporter [Chlamydia trachomatis B/TZ1A828/OT]
gi|231274258|emb|CAX11053.1| macromolecule transporter [Chlamydia trachomatis B/Jali20/OT]
gi|289525638|emb|CBJ15119.1| macromolecule transporter [Chlamydia trachomatis Sweden2]
gi|296435202|gb|ADH17380.1| macromolecule transporter [Chlamydia trachomatis E/150]
gi|296436131|gb|ADH18305.1| macromolecule transporter [Chlamydia trachomatis G/9768]
gi|296437059|gb|ADH19229.1| macromolecule transporter [Chlamydia trachomatis G/11222]
gi|296437991|gb|ADH20152.1| macromolecule transporter [Chlamydia trachomatis G/11074]
gi|296438921|gb|ADH21074.1| macromolecule transporter [Chlamydia trachomatis E/11023]
gi|297140493|gb|ADH97251.1| macromolecule transporter [Chlamydia trachomatis G/9301]
gi|297748726|gb|ADI51272.1| Tolq [Chlamydia trachomatis D-EC]
gi|297749606|gb|ADI52284.1| Tolq [Chlamydia trachomatis D-LC]
Length = 232
Score = 43.9 bits (102), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 101/216 (46%), Gaps = 30/216 (13%)
Query: 17 FMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSL 76
F + L K I LF SI +W+V+ QK ++++++F + SG+SL+ +
Sbjct: 13 FQEADLFGKVIFFSLFALSICTWTVLHQK----LSIQKKFLK------SGKSLKEFL--I 60
Query: 77 KNHHN----------IGLAAIFMSAMSEWKKSCDKG-----ARSPIGIQDRIDRMMDV-- 119
KN H+ ++ + + DK R+P+ + I + +
Sbjct: 61 KNRHSPLSLDIHPESTPFTDLYFTIKRGTLELLDKNRQLAPERTPLLSVEDIQSLETLFN 120
Query: 120 AIARELEEITEKLSFLGSMS-SAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIES 178
A+ + + K +F+ + + S +G+LG V G++ F I+ +N + + G+ +
Sbjct: 121 AVMPKYRALLNKNNFIPATTISLAPFLGLLGTVWGILLAFAHISTGQANGTIMMEGLATA 180
Query: 179 LISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFA 214
L + ++GL V+IPS + +N + + ++++E A
Sbjct: 181 LGTTIVGLFVAIPSLVGFNYLRAHAFQVSLEIEQTA 216
>gi|166154810|ref|YP_001654928.1| macromolecule transporter [Chlamydia trachomatis 434/Bu]
gi|166155685|ref|YP_001653940.1| macromolecule transporter [Chlamydia trachomatis
L2b/UCH-1/proctitis]
gi|301336088|ref|ZP_07224332.1| macromolecule transporter [Chlamydia trachomatis L2tet1]
gi|165930798|emb|CAP04296.1| macromolecule transporter [Chlamydia trachomatis 434/Bu]
gi|165931673|emb|CAP07250.1| macromolecule transporter [Chlamydia trachomatis
L2b/UCH-1/proctitis]
Length = 232
Score = 43.9 bits (102), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 101/216 (46%), Gaps = 30/216 (13%)
Query: 17 FMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSL 76
F + L K I LF SI +W+V+ QK ++++++F + SG+SL+ +
Sbjct: 13 FQEADLFGKVIFFSLFALSICTWTVLHQK----LSIQKKFLK------SGKSLKEFL--I 60
Query: 77 KNHHN----------IGLAAIFMSAMSEWKKSCDKG-----ARSPIGIQDRIDRMMDV-- 119
KN H+ ++ + + DK R+P+ + I + +
Sbjct: 61 KNRHSPLSLDIHPESTPFTDLYFTIKRGTLELLDKNRQLAPERTPLLSVEDIQSLETLFN 120
Query: 120 AIARELEEITEKLSFLGSMS-SAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIES 178
A+ + + K +F+ + + S +G+LG V G++ F I+ +N + + G+ +
Sbjct: 121 AVMPKYRALLNKNNFIPATTISLAPFLGLLGTVWGILLAFAHISTGQANGTIMMEGLATA 180
Query: 179 LISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFA 214
L + ++GL V+IPS + +N + + ++++E A
Sbjct: 181 LGTTIVGLFVAIPSLVGFNYLRAHAFQVSLEIEQTA 216
>gi|332534323|ref|ZP_08410166.1| MotA/TolQ/ExbB proton channel family protein [Pseudoalteromonas
haloplanktis ANT/505]
gi|332036233|gb|EGI72706.1| MotA/TolQ/ExbB proton channel family protein [Pseudoalteromonas
haloplanktis ANT/505]
Length = 441
Score = 43.9 bits (102), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 58/102 (56%), Gaps = 8/102 (7%)
Query: 133 SFLGSMS---SAGLLVGILGAVLGMMGFFQ--SIAGYYSNNVVSIPGIIESLISILLGLC 187
+F+G+++ + L+G+LG V GM+ F+ ++ G VVS GI ++LI+ LGL
Sbjct: 343 NFIGAIAVTAAVAPLLGLLGTVSGMIETFKMMTLFGSGDPEVVS-GGIAQALITTELGLV 401
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNI 229
V+IP+ + +K + Q+EGFA + S + + E N+
Sbjct: 402 VAIPALVLNALLSRKAKAYYSQLEGFALQLSQL--EKGENNV 441
>gi|294674580|ref|YP_003575196.1| MotA/TolQ/ExbB proton channel family protein [Prevotella ruminicola
23]
gi|294474063|gb|ADE83452.1| MotA/TolQ/ExbB proton channel family protein [Prevotella ruminicola
23]
Length = 276
Score = 43.9 bits (102), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 87/204 (42%), Gaps = 25/204 (12%)
Query: 21 GLAVKCIITLLFI---------FSILSWSVIIQKSVNFITLRRQFREF--EQLFWSGQSL 69
G V I+TLLF F+I + S +N Q +E Q F
Sbjct: 68 GFVVGLILTLLFTVICLGIERFFAIKTAS----GKINLAKFTAQVKELIKAQKF---DEA 120
Query: 70 ETVCKSLKNH-HNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ +C ++ N+ A+I E + K A+ +I + + A E+ +
Sbjct: 121 DKLCDKMQGSVSNVVKASIAAYKDVEGNDTLKKAAKVA-----KIQQAHEEATQLEMPTL 175
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI-AGYYSNNVVSIPGIIESLISILLGLC 187
L + ++ S G L + G VLGM+G FQ++ AG ++++ GI E+L++ G+
Sbjct: 176 QMNLPMVATIVSLGTLTALFGTVLGMIGSFQALSAGGGADSMALSAGISEALVNTASGIL 235
Query: 188 VSIPSSIAYNKFIEDSKKFAMQME 211
S +++ YN F K ++
Sbjct: 236 TSWVATVVYNFFSNKIDKLTYALD 259
>gi|294665029|ref|ZP_06730336.1| biopolymer transport ExbB protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
gi|292605186|gb|EFF48530.1| biopolymer transport ExbB protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
Length = 183
Score = 43.9 bits (102), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISILLGLCVSI 190
L+ LG+++SAG L+G+LG V+GM+ F I + +V + GI ++L+ G+ +++
Sbjct: 70 LNALGTIASAGPLLGLLGTVVGMIQMFMGILDHGVGDVNQLAGGIGKALVCTATGMIIAV 129
Query: 191 PSSIAYNKFIEDSKKFAMQME 211
P+ +A+ F + ++ME
Sbjct: 130 PALMAHRFFEGRIAGYIVEME 150
>gi|157736642|ref|YP_001489325.1| biopolymer transport protein ExbB [Arcobacter butzleri RM4018]
gi|315635806|ref|ZP_07891068.1| biopolymer transport protein ExbB [Arcobacter butzleri JV22]
gi|157698496|gb|ABV66656.1| biopolymer transport protein ExbB [Arcobacter butzleri RM4018]
gi|315479785|gb|EFU70456.1| biopolymer transport protein ExbB [Arcobacter butzleri JV22]
Length = 157
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 53/96 (55%), Gaps = 5/96 (5%)
Query: 109 IQDRIDRM--MDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA--GY 164
I++ +DR ++ I E +++ L+ + +++ L+G+LG V+G+ F I G
Sbjct: 45 IKENLDRTKPLEAQIEYETKKLESGLTVIKNIAIISPLLGLLGTVVGIYILFDQITLKGL 104
Query: 165 YSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFI 200
+ S GI +LI+ + G+ VSIP IAYN FI
Sbjct: 105 GDPTIFS-GGIAIALITTVAGIIVSIPHQIAYNHFI 139
>gi|89891836|ref|ZP_01203338.1| putative biopolymer transport protein [Flavobacteria bacterium
BBFL7]
gi|89515991|gb|EAS18656.1| putative biopolymer transport protein [Flavobacteria bacterium
BBFL7]
Length = 231
Score = 43.5 bits (101), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 56/103 (54%), Gaps = 4/103 (3%)
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA---GYYSNNVVSIPGIIESLI 180
E+ ++ + +S L +++ A ++G LG V+GM+ F+++A G ++ GI ++
Sbjct: 128 EVYKLEKNVSILATIAGAAPMIGFLGTVIGMVIAFRTLAESEGAPEMGTLA-EGIYTAMT 186
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
+ + GL V I + I YN + + K QME A +F +L+
Sbjct: 187 TTVAGLIVGIIAYIGYNHLVVKTDKVVHQMESNAVDFLDLLNE 229
>gi|169633832|ref|YP_001707568.1| putative biopolymer transport protein (ExbB) [Acinetobacter
baumannii SDF]
gi|169634450|ref|YP_001708186.1| putative biopolymer transport protein (ExbB) [Acinetobacter
baumannii SDF]
gi|169797295|ref|YP_001715088.1| putative biopolymer transport protein (ExbB) [Acinetobacter
baumannii AYE]
gi|184156783|ref|YP_001845122.1| biopolymer transport protein [Acinetobacter baumannii ACICU]
gi|213155895|ref|YP_002317940.1| MotA/TolQ/ExbB proton channel [Acinetobacter baumannii AB0057]
gi|239500814|ref|ZP_04660124.1| MotA/TolQ/ExbB proton channel [Acinetobacter baumannii AB900]
gi|293610249|ref|ZP_06692550.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|301346584|ref|ZP_07227325.1| MotA/TolQ/ExbB proton channel [Acinetobacter baumannii AB056]
gi|301511041|ref|ZP_07236278.1| MotA/TolQ/ExbB proton channel [Acinetobacter baumannii AB058]
gi|301596903|ref|ZP_07241911.1| MotA/TolQ/ExbB proton channel [Acinetobacter baumannii AB059]
gi|332853006|ref|ZP_08434516.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Acinetobacter baumannii 6013150]
gi|332866456|ref|ZP_08437025.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Acinetobacter baumannii 6013113]
gi|332873196|ref|ZP_08441153.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Acinetobacter baumannii 6014059]
gi|169150222|emb|CAM88118.1| putative biopolymer transport protein (ExbB) [Acinetobacter
baumannii AYE]
gi|169152624|emb|CAP01615.1| putative biopolymer transport protein (ExbB) [Acinetobacter
baumannii]
gi|169153242|emb|CAP02342.1| putative biopolymer transport protein (ExbB) [Acinetobacter
baumannii]
gi|183208377|gb|ACC55775.1| Biopolymer transport protein [Acinetobacter baumannii ACICU]
gi|193076269|gb|ABO10908.2| putative biopolymer transport protein (ExbB) [Acinetobacter
baumannii ATCC 17978]
gi|213055055|gb|ACJ39957.1| MotA/TolQ/ExbB proton channel [Acinetobacter baumannii AB0057]
gi|292827481|gb|EFF85845.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|322506675|gb|ADX02129.1| ExbB [Acinetobacter baumannii 1656-2]
gi|323516550|gb|ADX90931.1| biopolymer transport protein [Acinetobacter baumannii TCDC-AB0715]
gi|325124428|gb|ADY83951.1| MotA/TolQ/ExbB proton channel [Acinetobacter calcoaceticus PHEA-2]
gi|332728942|gb|EGJ60297.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Acinetobacter baumannii 6013150]
gi|332734613|gb|EGJ65720.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Acinetobacter baumannii 6013113]
gi|332738708|gb|EGJ69578.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Acinetobacter baumannii 6014059]
Length = 206
Score = 43.5 bits (101), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 90/208 (43%), Gaps = 36/208 (17%)
Query: 14 FALFMQMGLAV-KCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
F+++ Q AV K + +L SI +W+V I + + L++Q + QL + SL+
Sbjct: 3 FSIYWQHADAVSKTLYFILLAMSIATWTVFILRLMGTRQLKQQ--AYAQLSQAITSLKAK 60
Query: 73 CKSLKNHHNIGLA-AIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEK 131
+ L +A + +S K + DKG
Sbjct: 61 LQPLSFEQRKAVAEQALLRQISAEKANADKG----------------------------- 91
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGLCVS 189
+S LG+++S VG+ G V G+ ++ +G V+ P + E+LI LGL V+
Sbjct: 92 ISVLGTIASIAPFVGLFGTVWGIFHALVAVGKSGQAGLAQVATP-VGEALIMTGLGLAVA 150
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFANEF 217
IP+ +AYN + ++ A ++ A+
Sbjct: 151 IPAVLAYNICVRANRGLAHDLQDQAHSL 178
>gi|21231566|ref|NP_637483.1| biopolymer transport protein [Xanthomonas campestris pv. campestris
str. ATCC 33913]
gi|66768314|ref|YP_243076.1| biopolymer transport protein [Xanthomonas campestris pv. campestris
str. 8004]
gi|188991453|ref|YP_001903463.1| macromolecule import protein [Xanthomonas campestris pv. campestris
str. B100]
gi|21113252|gb|AAM41407.1| biopolymer transport protein [Xanthomonas campestris pv. campestris
str. ATCC 33913]
gi|66573646|gb|AAY49056.1| biopolymer transport protein [Xanthomonas campestris pv. campestris
str. 8004]
gi|167733213|emb|CAP51411.1| macromolecule import protein [Xanthomonas campestris pv.
campestris]
Length = 222
Score = 43.5 bits (101), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISILLGLCVSI 190
L+ LG+++SAG L+G+LG V+GM+ F I + +V + GI ++L+ G+ +++
Sbjct: 107 LNALGTIASAGPLLGLLGTVVGMIQMFLGILDHGVGDVNQLAGGIGKALVCTATGMIIAV 166
Query: 191 PSSIAYNKFIEDSKKFAMQME 211
PS +A+ F + ++ME
Sbjct: 167 PSLMAHRFFKGRIAGYIIEME 187
>gi|167949014|ref|ZP_02536088.1| MotA/TolQ/ExbB proton channel [Endoriftia persephone
'Hot96_1+Hot96_2']
Length = 244
Score = 43.5 bits (101), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 56/106 (52%), Gaps = 12/106 (11%)
Query: 117 MDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA--GYYSNNVVSIPG 174
+D AI +E+ + L +G +++ L+G+LG V GM+ FQSI G ++S G
Sbjct: 130 LDEAILKEIPRLRRGLPLVGILAAVAPLLGLLGTVTGMIETFQSITLFGAGDPRLMS-GG 188
Query: 175 IIESLISILLGLCVSIPSSIAY-------NKFIE--DSKKFAMQME 211
I ++L++ LGL +IP + + N+ I+ D + AM E
Sbjct: 189 ISQALVTTELGLAAAIPLVLLHSFMSGRSNRLIQILDEQSAAMVAE 234
>gi|193216030|ref|YP_001997229.1| MotA/TolQ/ExbB proton channel [Chloroherpeton thalassium ATCC
35110]
gi|193089507|gb|ACF14782.1| MotA/TolQ/ExbB proton channel [Chloroherpeton thalassium ATCC
35110]
Length = 250
Score = 43.5 bits (101), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 36/177 (20%), Positives = 84/177 (47%), Gaps = 3/177 (1%)
Query: 31 LFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMS 90
+ I ++ S+ ++K+ L +E E +G+ +++ + +NH + L+A+ +
Sbjct: 53 MVISYVIERSIALKKAEGKGGLTGFIKEIETEIEAGK-IDSAIEMCENHQS-SLSAVIRA 110
Query: 91 AMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGA 150
+ ++K + P + + ++ A E+ + L + +++S + G+ G
Sbjct: 111 GLQKYKSLVKRNINDPEKRMSEMQKSIEEASMMEMPLLERNLVAISTIASIATMFGLFGT 170
Query: 151 VLGMMGFFQSIAGYYSNNVVSIP-GIIESLISILLGLCVSIPSSIAYNKFIEDSKKF 206
+GM+ FQ++A + + V + GI E+L + LG+ I ++YN F +F
Sbjct: 171 TIGMIRAFQALATGGAPDAVQLSLGISEALYNTALGIFGGISGIVSYNFFTNKIDRF 227
>gi|149378072|ref|ZP_01895794.1| Biopolymer transport protein [Marinobacter algicola DG893]
gi|149357641|gb|EDM46141.1| Biopolymer transport protein [Marinobacter algicola DG893]
Length = 208
Score = 43.5 bits (101), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 51/90 (56%), Gaps = 5/90 (5%)
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGY-YSNNVVSIPGIIESLIS 181
+ E+ L+ LG++++ L+G+LG V+GM+ F I AG + N+ GI E+LI+
Sbjct: 100 IHELERFLNPLGTVATITPLLGLLGTVIGMIKVFAEIQLAGVGDAGNLAG--GISEALIT 157
Query: 182 ILLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
GL V+IP+ I + FI + + ME
Sbjct: 158 TASGLSVAIPALICHRYFIRRVDELVVGME 187
>gi|21242824|ref|NP_642406.1| biopolymer transport protein [Xanthomonas axonopodis pv. citri str.
306]
gi|21108311|gb|AAM36942.1| biopolymer transport protein [Xanthomonas axonopodis pv. citri str.
306]
Length = 220
Score = 43.5 bits (101), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISILLGLCVSI 190
L+ LG+++SAG L+G+LG V+GM+ F I + +V + GI ++L+ G+ +++
Sbjct: 107 LNALGTIASAGPLLGLLGTVVGMIQMFMGILDHGVGDVNQLAGGIGKALVCTATGMIIAV 166
Query: 191 PSSIAYNKFIEDSKKFAMQME 211
P+ +A+ F + ++ME
Sbjct: 167 PALMAHRFFKGRIAGYIVEME 187
>gi|325920378|ref|ZP_08182309.1| biopolymer transport protein [Xanthomonas gardneri ATCC 19865]
gi|325549125|gb|EGD20048.1| biopolymer transport protein [Xanthomonas gardneri ATCC 19865]
Length = 220
Score = 43.5 bits (101), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISILLGLCVSI 190
L+ LG+++SAG L+G+LG V+GM+ F I + +V + GI ++L+ G+ +++
Sbjct: 107 LNALGTIASAGPLLGLLGTVVGMIQMFMGILDHGVGDVNQLAGGIGKALVCTATGMIIAV 166
Query: 191 PSSIAYNKFIEDSKKFAMQME 211
P+ +A+ F + ++ME
Sbjct: 167 PALMAHRFFKGRIAGYIIEME 187
>gi|257452703|ref|ZP_05618002.1| biopolymer transport exbB protein [Fusobacterium sp. 3_1_5R]
gi|257466564|ref|ZP_05630875.1| biopolymer transport exbB protein [Fusobacterium gonidiaformans
ATCC 25563]
gi|315917719|ref|ZP_07913959.1| biopolymer transport exbB protein [Fusobacterium gonidiaformans
ATCC 25563]
gi|317059244|ref|ZP_07923729.1| biopolymer transport exbB protein [Fusobacterium sp. 3_1_5R]
gi|313684920|gb|EFS21755.1| biopolymer transport exbB protein [Fusobacterium sp. 3_1_5R]
gi|313691594|gb|EFS28429.1| biopolymer transport exbB protein [Fusobacterium gonidiaformans
ATCC 25563]
Length = 203
Score = 43.5 bits (101), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 49/87 (56%), Gaps = 2/87 (2%)
Query: 114 DRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-VVSI 172
++ +VAI ++L + + + + LVG+LG V GM+ FQ++A Y + + V
Sbjct: 94 EKGKEVAI-QQLRYLERNMWLISVAAHVAPLVGLLGTVTGMIKAFQAVALYGTGDPAVLA 152
Query: 173 PGIIESLISILLGLCVSIPSSIAYNKF 199
GI E+L + GL V+IP+ I YN +
Sbjct: 153 KGISEALYTTAGGLFVAIPAMILYNYY 179
>gi|296156467|ref|ZP_06839305.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. Ch1-1]
gi|295893066|gb|EFG72846.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. Ch1-1]
Length = 215
Score = 43.5 bits (101), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 56/98 (57%), Gaps = 2/98 (2%)
Query: 120 AIARELE-EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIE 177
++A ++E +++ L ++ +A L+G+LG ++GMM FQ G + + G + +
Sbjct: 101 SVASQIERDMSRGFWVLETIVTAAPLLGLLGTIVGMMHSFQLFGGTGLVDPAGVTGGVAQ 160
Query: 178 SLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFAN 215
SL++ +GL V++ + A+N F ++ ++E FAN
Sbjct: 161 SLVATAIGLVVALFALFAFNYFSRRLERLMDELESFAN 198
>gi|254486924|ref|ZP_05100129.1| MotA/TolQ/ExbB proton channel [Roseobacter sp. GAI101]
gi|214043793|gb|EEB84431.1| MotA/TolQ/ExbB proton channel [Roseobacter sp. GAI101]
Length = 194
Score = 43.5 bits (101), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 70/138 (50%), Gaps = 13/138 (9%)
Query: 64 WSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAR 123
WS E + ++ GL A F++ + ++ D AR + +M +A AR
Sbjct: 43 WSRSGAEALLAG-QSGAPKGLRARFVAEVFAARRLPDALAR---------EEVMRIA-AR 91
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLIS 181
L ++ L L + + L+G+LG VLGM+ FQ++ G ++ V GI E+L++
Sbjct: 92 VLSQLRSGLRPLELIVTIAPLIGLLGTVLGMIEAFQALETTGGQADPSVLAGGIWEALLT 151
Query: 182 ILLGLCVSIPSSIAYNKF 199
G+ V+IP+++A + F
Sbjct: 152 TAAGMGVAIPAAVALSWF 169
>gi|319952330|ref|YP_004163597.1| outer membrane transport energization protein exbb [Cellulophaga
algicola DSM 14237]
gi|319420990|gb|ADV48099.1| outer membrane transport energization protein ExbB [Cellulophaga
algicola DSM 14237]
Length = 230
Score = 43.5 bits (101), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 59/115 (51%), Gaps = 2/115 (1%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA--GYYSNN 168
+ I++ ++ A E+ ++ + +S L +++ A ++G LG V+GM+ F +A G +
Sbjct: 114 EDINKAIENAGTLEVYKLEKNVSILATVAGAAPMIGFLGTVIGMILAFHEMASSGGQAEM 173
Query: 169 VVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
GI ++ + + GL V I + I YN + + K ME A +F +L+
Sbjct: 174 GSLASGIYTAMTTTVAGLIVGIIAYIGYNHLVNRTDKVVHSMEANAVDFLDLLNE 228
>gi|237653875|ref|YP_002890189.1| MotA/TolQ/ExbB proton channel [Thauera sp. MZ1T]
gi|237625122|gb|ACR01812.1| MotA/TolQ/ExbB proton channel [Thauera sp. MZ1T]
Length = 202
Score = 43.5 bits (101), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 92/202 (45%), Gaps = 35/202 (17%)
Query: 23 AVKCIITLLFIFSILSWSVIIQKSVNFITLRRQF--------REFEQLFWSGQSLETVCK 74
AV I L + S+++ ++II++S ITLRR + + L G S E + +
Sbjct: 7 AVGWPIWPLILASVIAVALIIERS---ITLRRSRIVPPGLLDKVLDDLRQIGPSAE-MAE 62
Query: 75 SLKNHHNIG--LAAIFMSAMSE---WKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+ H +G LAA + S K+S ++ R A+ +LE
Sbjct: 63 RVAAHSPLGRVLAAGLRNVHSPREVMKESIEETGR---------------AVVHDLERF- 106
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVS 189
L+ LG+++S L+G+LG ++GM+ F S +N GI +L + LGL ++
Sbjct: 107 --LTTLGTIASISPLMGLLGTIIGMIDIFASQGVSGANPAQLAQGISIALYTTGLGLIIA 164
Query: 190 IPSSIAYNKFIEDSKKFAMQME 211
IP+ I + F F + ME
Sbjct: 165 IPAMIFWRHFRALIDSFVIDME 186
>gi|119897759|ref|YP_932972.1| biopolymer transport protein ExbB [Azoarcus sp. BH72]
gi|119670172|emb|CAL94085.1| conserved hypothetical biopolymer transport protein ExbB [Azoarcus
sp. BH72]
Length = 202
Score = 43.5 bits (101), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 86/181 (47%), Gaps = 9/181 (4%)
Query: 31 LFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMS 90
L + S+++ ++II++SV +LRR ++ +G L+ V L++H ++
Sbjct: 15 LLLASVIAVALIIERSV---SLRRA-----RVVPAGL-LDKVLVDLRSHGASAEMINRVA 65
Query: 91 AMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGA 150
A S + G R+ +D + ++ + E+ L+ LG+++S L+G+ G
Sbjct: 66 AHSPLGRVLAAGLRNIGASRDVMKESIEETGRAVVHELERFLTTLGTIASVAPLLGLFGT 125
Query: 151 VLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQM 210
V+GM+ F S +N GI +L + GL ++IP+ I + F F + M
Sbjct: 126 VIGMIEIFASQGISGANTAQLAHGISLALYATGFGLVIAIPTMIFWRHFRRLIDDFVIDM 185
Query: 211 E 211
E
Sbjct: 186 E 186
>gi|256420471|ref|YP_003121124.1| MotA/TolQ/ExbB proton channel [Chitinophaga pinensis DSM 2588]
gi|256035379|gb|ACU58923.1| MotA/TolQ/ExbB proton channel [Chitinophaga pinensis DSM 2588]
Length = 286
Score = 43.5 bits (101), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 54/104 (51%), Gaps = 3/104 (2%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI-AGYYSNNVVS 171
I ++ A EL + + L FL +++S L+G+ G VLGM+ F ++ AG ++
Sbjct: 172 IKNEIEETTALELPMMEKNLVFLSTIASVATLLGLFGTVLGMIKSFSAMSAGGAPDSAKL 231
Query: 172 IPGIIESLISILLGLCVSIPSSIAYNKFIE--DSKKFAMQMEGF 213
GI E+LI+ LG+ S + I YN F D +A+ GF
Sbjct: 232 ALGISEALINTALGIGTSAIAIIMYNFFTTNIDGITYAIDESGF 275
>gi|289665893|ref|ZP_06487474.1| biopolymer transport protein [Xanthomonas campestris pv. vasculorum
NCPPB702]
gi|289669016|ref|ZP_06490091.1| biopolymer transport protein [Xanthomonas campestris pv. musacearum
NCPPB4381]
Length = 220
Score = 43.5 bits (101), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISILLGLCVSI 190
L+ LG+++SAG L+G+LG V+GM+ F I + +V + GI ++L+ G+ +++
Sbjct: 107 LNTLGTIASAGPLLGLLGTVVGMIQMFLGILDHGVGDVNQLAGGIGKALVCTATGMIIAV 166
Query: 191 PSSIAYNKFIEDSKKFAMQME 211
P+ +A+ F + ++ME
Sbjct: 167 PALMAHRFFKGRIAGYIIEME 187
>gi|323135641|ref|ZP_08070724.1| MotA/TolQ/ExbB proton channel [Methylocystis sp. ATCC 49242]
gi|322398732|gb|EFY01251.1| MotA/TolQ/ExbB proton channel [Methylocystis sp. ATCC 49242]
Length = 214
Score = 43.5 bits (101), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 86/190 (45%), Gaps = 21/190 (11%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+S ++F+ G K ++ +L + S+ +W +I++ V + + +
Sbjct: 6 LSPLSMFLNAGPVGKIVMAMLLLASVWTWVLIVEGVVAVMRISK---------------- 49
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARE-LEEIT 129
S ++ +G+ A +A E + D + ++RI M ARE L +
Sbjct: 50 -AAASARSGGPVGVLAPVEAAGRE-AFALDLPDETIGDKRERIAEHMS-RTAREFLTKAE 106
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCV 188
L L +SS VG+ G V G+M F IA ++ V PGI E+L + GL
Sbjct: 107 GGLPNLAVISSVAPFVGLFGTVWGIMTSFAGIAQSQDTSLAVVAPGIAEALAATAYGLAA 166
Query: 189 SIPSSIAYNK 198
+IP+S+AYN+
Sbjct: 167 AIPASVAYNR 176
>gi|294054024|ref|YP_003547682.1| MotA/TolQ/ExbB proton channel [Coraliomargarita akajimensis DSM
45221]
gi|293613357|gb|ADE53512.1| MotA/TolQ/ExbB proton channel [Coraliomargarita akajimensis DSM
45221]
Length = 264
Score = 43.5 bits (101), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 57/103 (55%), Gaps = 3/103 (2%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA--GYYSN 167
+ ID+ D A + EL + +++L ++S +VG+LG V GM+ F++IA G
Sbjct: 144 EQTIDKAFDEAASVELAKPFVFINYLQVIASVAPMVGLLGTVSGMVKAFRTIAEQGMGRP 203
Query: 168 NVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQM 210
+++ I E+LI+ GL V+IP+ IAY F K A ++
Sbjct: 204 ELLA-DNISEALITTASGLTVAIPALIAYFYFKNRYGKIASEV 245
>gi|74317528|ref|YP_315268.1| exbB-like biopolymer transport [Thiobacillus denitrificans ATCC
25259]
gi|74057023|gb|AAZ97463.1| probable exbB-like biopolymer transport [Thiobacillus denitrificans
ATCC 25259]
Length = 201
Score = 43.5 bits (101), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 87/198 (43%), Gaps = 43/198 (21%)
Query: 31 LFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLET--------VCKSLKNH--H 80
L + S+++ ++II+++ + T RE +G LET V L +H
Sbjct: 15 LILASVIAVAIIIERAYSLRT-----REVAP---AGLLLETIKVYQERGVSTELVSHLAD 66
Query: 81 NIGLAAIFMSAMSE-------WKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLS 133
N L IF +A+ K+S ++ R+ + +DR L+
Sbjct: 67 NSPLGRIFATALRNANNSREIMKESIEEAGRA---VTHDLDRF---------------LT 108
Query: 134 FLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSS 193
LG+++S L+G+LG V+GM+ F + G +N GI +L + GL V+IP+
Sbjct: 109 SLGTIASMAPLLGLLGTVIGMIEIFGAQTGGAANPGQLAHGISIALYNTAFGLIVAIPAM 168
Query: 194 IAYNKFIEDSKKFAMQME 211
I Y F + + ME
Sbjct: 169 IFYRYFRSRVESLVVDME 186
>gi|257464145|ref|ZP_05628526.1| MotA/TolQ/ExbB proton channel [Fusobacterium sp. D12]
Length = 211
Score = 43.5 bits (101), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 31/139 (22%), Positives = 63/139 (45%), Gaps = 14/139 (10%)
Query: 59 FEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIG-------IQD 111
+++ F S + T C + +H F A +K+ A+ + I
Sbjct: 39 YKKAFSSTDFVITFCALMNEYH-------FEEARKYAEKNTGDAAKLALDTFHMKEDIGK 91
Query: 112 RIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVS 171
R++ ++ R ++ + + L +L + ++G+LG + GMM F ++ N +
Sbjct: 92 RLESLVYSKAERAIDGMEQHLDYLSVIIGLAPMLGLLGTITGMMSSFNALNERLQNPMAV 151
Query: 172 IPGIIESLISILLGLCVSI 190
GI E+LI+ + GLC++I
Sbjct: 152 TAGIGEALITTVFGLCIAI 170
>gi|213962188|ref|ZP_03390452.1| MotA/TolQ/ExbB family biopolymer transport protein [Capnocytophaga
sputigena Capno]
gi|213955194|gb|EEB66512.1| MotA/TolQ/ExbB family biopolymer transport protein [Capnocytophaga
sputigena Capno]
Length = 232
Score = 43.5 bits (101), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 59/115 (51%), Gaps = 2/115 (1%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNN 168
+ I++ ++ A E+ ++ + + L +++ AG ++G LG V+GM+ F + AG +
Sbjct: 116 EDINKAIENAGTLEVYKLEKNTAILATIAGAGPMIGFLGTVVGMIMSFHEMASAGGQAEM 175
Query: 169 VVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
GI ++ + + GL V I + + YN + + K ME A EF +L+
Sbjct: 176 GALAGGIYTAMATTVAGLIVGIIAYVGYNHLVVKTDKVVHLMEANAVEFLDLLNE 230
>gi|95928838|ref|ZP_01311584.1| MotA/TolQ/ExbB proton channel [Desulfuromonas acetoxidans DSM 684]
gi|95135183|gb|EAT16836.1| MotA/TolQ/ExbB proton channel [Desulfuromonas acetoxidans DSM 684]
Length = 146
Score = 43.5 bits (101), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCV 188
++L+ L ++ + +G+ G VLG++ F + + + V + GI E+L++ +GL V
Sbjct: 61 KRLTILATLGNNAPFIGLFGTVLGVIKAFHDLHLQQGSGIKVVMGGISEALVATAMGLLV 120
Query: 189 SIPSSIAYNKF 199
+IP+ IAYN F
Sbjct: 121 AIPAVIAYNAF 131
>gi|328952316|ref|YP_004369650.1| MotA/TolQ/ExbB proton channel [Desulfobacca acetoxidans DSM 11109]
gi|328452640|gb|AEB08469.1| MotA/TolQ/ExbB proton channel [Desulfobacca acetoxidans DSM 11109]
Length = 224
Score = 43.5 bits (101), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 50/96 (52%), Gaps = 1/96 (1%)
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCVSI 190
L+FLG++ + +G+ G VLG++ F+ +A ++ GI E+L++ +GL V+I
Sbjct: 114 LNFLGTLGANAPFIGLFGTVLGIIHAFKDLALTEGGGGPAVMAGIAEALVATAVGLLVAI 173
Query: 191 PSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
P+ + YN + + + A LSRQ +
Sbjct: 174 PAVVMYNFYHRRLHIVLERSQRLGRLLLASLSRQPQ 209
>gi|294794351|ref|ZP_06759487.1| MotA/TolQ/ExbB proton channel family protein [Veillonella sp.
3_1_44]
gi|294454681|gb|EFG23054.1| MotA/TolQ/ExbB proton channel family protein [Veillonella sp.
3_1_44]
Length = 203
Score = 43.5 bits (101), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 55/121 (45%), Gaps = 5/121 (4%)
Query: 110 QDR--IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSN 167
QDR + M+ +A + L +L ++ + L+G+LG V GM+G FQ +
Sbjct: 84 QDRNVLQSKMEDMVAHVYTHASRGLDWLSTIVTIAPLLGLLGTVTGMIGAFQVFGADGAV 143
Query: 168 NVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEG 227
G+ E+L++ GLCV+I + + F + M + + FS +L G
Sbjct: 144 PTAITGGVGEALVATASGLCVAIVALCFHAGFTHHVR---MTISRLEDSFSRVLDSYDRG 200
Query: 228 N 228
+
Sbjct: 201 H 201
>gi|30249158|ref|NP_841228.1| MotA/TolQ/ExbB proton channel family protein [Nitrosomonas europaea
ATCC 19718]
gi|30180477|emb|CAD85082.1| MotA/TolQ/ExbB proton channel family [Nitrosomonas europaea ATCC
19718]
Length = 202
Score = 43.5 bits (101), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 82/173 (47%), Gaps = 17/173 (9%)
Query: 39 WSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKS 98
WS+ K L R +E+ + SG +T+ + L+ H +G + ++ + K+
Sbjct: 31 WSLRRSKVSPRDLLPRVLQEYRR---SGVHTDTLTR-LQEHSPLG--QVLVAGL----KN 80
Query: 99 CDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFF 158
D + +++ I+ VA A ELE L+ LG+++S L+G+ G ++GM+ F
Sbjct: 81 IDSPREA---MKESIEEAGRVA-AHELERY---LTTLGTIASLSPLMGLFGTLIGMIEIF 133
Query: 159 QSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
S N + GI +L + G+ V+IPS + Y F + ++ME
Sbjct: 134 GSGTPTGGNPIQLAHGISVALYNAAFGILVAIPSIVFYRYFRAKVDELVLEME 186
>gi|255693826|ref|ZP_05417501.1| MotA/TolQ/ExbB proton channel family protein [Bacteroides
finegoldii DSM 17565]
gi|260620358|gb|EEX43229.1| MotA/TolQ/ExbB proton channel family protein [Bacteroides
finegoldii DSM 17565]
Length = 267
Score = 43.5 bits (101), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 58/107 (54%), Gaps = 11/107 (10%)
Query: 119 VAIARELEEIT--------EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI-AGYYSNNV 169
+AI +ELEE T + L + ++++ G L+G+LG V+GM+ F ++ AG ++++
Sbjct: 152 LAIQKELEEATALEMPMMQQNLPIIATITTLGTLMGLLGTVIGMIRSFAALSAGGGADSM 211
Query: 170 VSIPGIIESLISILLGLCVSIPSSIAYNKFIE--DSKKFAMQMEGFA 214
GI E+LI+ G+ + I+YN + D + + GF+
Sbjct: 212 ALSQGISEALINTAFGILTGALAVISYNYYTNKIDKLTYGLDEVGFS 258
>gi|149928091|ref|ZP_01916338.1| probable exbB-like biopolymer transport [Limnobacter sp. MED105]
gi|149823177|gb|EDM82414.1| probable exbB-like biopolymer transport [Limnobacter sp. MED105]
Length = 204
Score = 43.5 bits (101), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 70/142 (49%), Gaps = 30/142 (21%)
Query: 72 VCKSL---KNHHNIG-------LAAIFMSAMSEWKKSCDKGA---RSPIGIQDRIDRMMD 118
VCK+L K+ NI L ++ + +S + K+ D + +GIQ+ +++ +D
Sbjct: 47 VCKTLPQFKDRQNIARLEAHSALGSLMAAGLSAFYKNEDIESAMQDKSVGIQNTLEKHLD 106
Query: 119 VAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIE 177
V L ++SA L+G+LG V+GM+ F ++ G + +I GI
Sbjct: 107 V---------------LSMIASAAPLMGLLGTVIGMIEIF-AVQGSGTQTPEAIAAGIAV 150
Query: 178 SLISILLGLCVSIPSSIAYNKF 199
+L + GL V+IP+ +AY F
Sbjct: 151 ALYNTAFGLIVAIPALVAYRLF 172
>gi|325928367|ref|ZP_08189562.1| biopolymer transport protein [Xanthomonas perforans 91-118]
gi|325541243|gb|EGD12790.1| biopolymer transport protein [Xanthomonas perforans 91-118]
Length = 209
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISILLGLCVSI 190
L+ LG+++SAG L+G+LG V+GM+ F I + +V + GI ++L+ G+ +++
Sbjct: 96 LNALGTIASAGPLLGLLGTVVGMIQMFLGILDHGVGDVNQLAGGIGKALVCTATGMIIAV 155
Query: 191 PSSIAYNKFIEDSKKFAMQME 211
P+ +A+ F + ++ME
Sbjct: 156 PALMAHRFFKGRIAGYIIEME 176
>gi|149177284|ref|ZP_01855889.1| probable TolQ-type transport protein [Planctomyces maris DSM 8797]
gi|148843809|gb|EDL58167.1| probable TolQ-type transport protein [Planctomyces maris DSM 8797]
Length = 284
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 55/116 (47%), Gaps = 1/116 (0%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI 172
+++ M+ A ++ + K+ +L + + ++G+LG V GM+ F + +V +
Sbjct: 134 VEKAMEDAAMQQSARLNRKIEYLSVIGTLSPMLGLLGTVWGMILAFSEFTAKANPDVAEL 193
Query: 173 -PGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEG 227
PGI ++LI+ L GL V++P+ ++ F + Q A A R T
Sbjct: 194 APGISKALITTLFGLSVTVPALASFAFFRNRIDELVAQSSLLAEHVFADFKRSTPA 249
>gi|237713971|ref|ZP_04544452.1| MotA/TolQ/ExbB proton channel [Bacteroides sp. D1]
gi|262409120|ref|ZP_06085664.1| MotA/TolQ/ExbB proton channel [Bacteroides sp. 2_1_22]
gi|294647405|ref|ZP_06724995.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Bacteroides ovatus SD CC 2a]
gi|294807921|ref|ZP_06766701.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Bacteroides xylanisolvens SD CC 1b]
gi|298482210|ref|ZP_07000397.1| MotA/TolQ/ExbB proton channel family protein [Bacteroides sp. D22]
gi|299149482|ref|ZP_07042538.1| MotA/TolQ/ExbB proton channel family protein [Bacteroides sp.
3_1_23]
gi|229446127|gb|EEO51918.1| MotA/TolQ/ExbB proton channel [Bacteroides sp. D1]
gi|262352867|gb|EEZ01963.1| MotA/TolQ/ExbB proton channel [Bacteroides sp. 2_1_22]
gi|292637266|gb|EFF55694.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Bacteroides ovatus SD CC 2a]
gi|294444859|gb|EFG13546.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Bacteroides xylanisolvens SD CC 1b]
gi|295085246|emb|CBK66769.1| outer membrane transport energization protein ExbB (TC 2.C.1.1.1)
[Bacteroides xylanisolvens XB1A]
gi|298271497|gb|EFI13071.1| MotA/TolQ/ExbB proton channel family protein [Bacteroides sp. D22]
gi|298512512|gb|EFI36405.1| MotA/TolQ/ExbB proton channel family protein [Bacteroides sp.
3_1_23]
Length = 265
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 58/107 (54%), Gaps = 11/107 (10%)
Query: 119 VAIARELEEIT--------EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI-AGYYSNNV 169
+AI +ELEE T + L + ++++ G L+G+LG V+GM+ F ++ AG ++++
Sbjct: 150 LAIQKELEEATALEMPMMQQNLPIIATITTLGTLMGLLGTVIGMIRSFAALSAGGGADSM 209
Query: 170 VSIPGIIESLISILLGLCVSIPSSIAYNKFIE--DSKKFAMQMEGFA 214
GI E+LI+ G+ + I+YN + D + + GF+
Sbjct: 210 ALSQGISEALINTAFGILTGALAVISYNYYTNKIDKLTYGLDEVGFS 256
>gi|317061659|ref|ZP_07926144.1| MotA/TolQ/ExbB proton channel family protein [Fusobacterium sp.
D12]
gi|313687335|gb|EFS24170.1| MotA/TolQ/ExbB proton channel family protein [Fusobacterium sp.
D12]
Length = 217
Score = 43.1 bits (100), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 31/139 (22%), Positives = 63/139 (45%), Gaps = 14/139 (10%)
Query: 59 FEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIG-------IQD 111
+++ F S + T C + +H F A +K+ A+ + I
Sbjct: 45 YKKAFSSTDFVITFCALMNEYH-------FEEARKYAEKNTGDAAKLALDTFHMKEDIGK 97
Query: 112 RIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVS 171
R++ ++ R ++ + + L +L + ++G+LG + GMM F ++ N +
Sbjct: 98 RLESLVYSKAERAIDGMEQHLDYLSVIIGLAPMLGLLGTITGMMSSFNALNERLQNPMAV 157
Query: 172 IPGIIESLISILLGLCVSI 190
GI E+LI+ + GLC++I
Sbjct: 158 TAGIGEALITTVFGLCIAI 176
>gi|282849621|ref|ZP_06259005.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Veillonella parvula ATCC 17745]
gi|282580558|gb|EFB85957.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Veillonella parvula ATCC 17745]
Length = 203
Score = 43.1 bits (100), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 55/121 (45%), Gaps = 5/121 (4%)
Query: 110 QDR--IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSN 167
QDR + M+ +A + L +L ++ + L+G+LG V GM+G FQ +
Sbjct: 84 QDRNVLQSKMEDMVAHVYTHASRGLDWLSTIVTIAPLLGLLGTVTGMIGAFQVFGADGAV 143
Query: 168 NVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEG 227
G+ E+L++ GLCV+I + + F + M + + FS +L G
Sbjct: 144 PTAITGGVGEALVATASGLCVAIVALCFHAGFTHHVR---MTISRLEDSFSRVLDSYDRG 200
Query: 228 N 228
+
Sbjct: 201 H 201
>gi|237717528|ref|ZP_04548009.1| MotA/TolQ/ExbB proton channel [Bacteroides sp. 2_2_4]
gi|260175235|ref|ZP_05761647.1| MotA/TolQ/ExbB proton channel [Bacteroides sp. D2]
gi|293373390|ref|ZP_06619745.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Bacteroides ovatus SD CMC 3f]
gi|315923467|ref|ZP_07919707.1| MotA/TolQ/ExbB proton channel [Bacteroides sp. D2]
gi|229453158|gb|EEO58949.1| MotA/TolQ/ExbB proton channel [Bacteroides sp. 2_2_4]
gi|292631528|gb|EFF50151.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Bacteroides ovatus SD CMC 3f]
gi|313697342|gb|EFS34177.1| MotA/TolQ/ExbB proton channel [Bacteroides sp. D2]
Length = 265
Score = 43.1 bits (100), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 58/107 (54%), Gaps = 11/107 (10%)
Query: 119 VAIARELEEIT--------EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI-AGYYSNNV 169
+AI +ELEE T + L + ++++ G L+G+LG V+GM+ F ++ AG ++++
Sbjct: 150 LAIQKELEEATALEMPMMQQNLPIIATITTLGTLMGLLGTVIGMIRSFAALSAGGGADSM 209
Query: 170 VSIPGIIESLISILLGLCVSIPSSIAYNKFIE--DSKKFAMQMEGFA 214
GI E+LI+ G+ + I+YN + D + + GF+
Sbjct: 210 ALSQGISEALINTAFGILTGALAVISYNYYTNKIDKLTYGLDEVGFS 256
>gi|262370374|ref|ZP_06063700.1| biopolymer transporter [Acinetobacter johnsonii SH046]
gi|262314716|gb|EEY95757.1| biopolymer transporter [Acinetobacter johnsonii SH046]
Length = 217
Score = 43.1 bits (100), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 89/169 (52%), Gaps = 14/169 (8%)
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAI--FMSAMSEWKKSCDKGARSPIGIQDRIDRMMDV 119
L QS++ V LK + ++ + + A + K ++ AR+ M+
Sbjct: 44 LLNPAQSVQMVLPKLKQNQDLQATTLGRILEAGYQSKAQGEQFARA----------QMEA 93
Query: 120 AIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA-GYYSNNVVSIPGIIES 178
++E+ + + ++FLG++S+ L+G+LG VLG++ F I G SN + IPGI ++
Sbjct: 94 TASQEIGYLEKNINFLGTLSAVAPLLGLLGTVLGIIESFLMIDIGNSSNPTLMIPGISKA 153
Query: 179 LISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEF-SAILSRQTE 226
LI+ G+ ++IP+ AY F +++ ++E + F +A+ ++TE
Sbjct: 154 LITTAAGMFIAIPALFAYRYFQRLVQEYVAELEQQSTLFHAALFYKKTE 202
>gi|160882186|ref|ZP_02063189.1| hypothetical protein BACOVA_00131 [Bacteroides ovatus ATCC 8483]
gi|156112441|gb|EDO14186.1| hypothetical protein BACOVA_00131 [Bacteroides ovatus ATCC 8483]
Length = 265
Score = 43.1 bits (100), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 58/107 (54%), Gaps = 11/107 (10%)
Query: 119 VAIARELEEIT--------EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI-AGYYSNNV 169
+AI +ELEE T + L + ++++ G L+G+LG V+GM+ F ++ AG ++++
Sbjct: 150 LAIQKELEEATALEMPMMQQNLPIIATITTLGTLMGLLGTVIGMIRSFAALSAGGGADSM 209
Query: 170 VSIPGIIESLISILLGLCVSIPSSIAYNKFIE--DSKKFAMQMEGFA 214
GI E+LI+ G+ + I+YN + D + + GF+
Sbjct: 210 ALSQGISEALINTAFGILTGALAVISYNYYTNKIDKLTYGLDEVGFS 256
>gi|326385756|ref|ZP_08207385.1| MotA/TolQ/ExbB proton channel [Novosphingobium nitrogenifigens DSM
19370]
gi|326209735|gb|EGD60523.1| MotA/TolQ/ExbB proton channel [Novosphingobium nitrogenifigens DSM
19370]
Length = 575
Score = 43.1 bits (100), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 45/83 (54%), Gaps = 5/83 (6%)
Query: 120 AIAR----ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PG 174
A+AR E + + L L S +G+LG V+G+M F +IA NV +I PG
Sbjct: 452 AVARTQIDEAAALNKGLVMLTLTISGAPFLGLLGTVIGVMITFAAIAASGDVNVNTIAPG 511
Query: 175 IIESLISILLGLCVSIPSSIAYN 197
I +L ++GL V+IP+ AYN
Sbjct: 512 ISAALACTVVGLVVAIPTVFAYN 534
>gi|94985854|ref|YP_605218.1| MotA/TolQ/ExbB proton channel [Deinococcus geothermalis DSM 11300]
gi|94556135|gb|ABF46049.1| MotA/TolQ/ExbB proton channel [Deinococcus geothermalis DSM 11300]
Length = 230
Score = 43.1 bits (100), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 49/99 (49%), Gaps = 9/99 (9%)
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-----GIIESLISILLGL 186
LS LG+ + L+G+LG V+GM+ F +S+ P GI E+LI+ GL
Sbjct: 111 LSALGTAAQIAPLLGLLGTVIGMVRSFL----VFSSTTSPTPGQLATGISEALINTAGGL 166
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
V+I + +A N + + A Q E E A L+ +T
Sbjct: 167 IVAIVAYVARNALRAKADRIATQAERVREELPAWLAPRT 205
>gi|149176886|ref|ZP_01855496.1| probable tolQ protein [Planctomyces maris DSM 8797]
gi|148844323|gb|EDL58676.1| probable tolQ protein [Planctomyces maris DSM 8797]
Length = 297
Score = 43.1 bits (100), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 61/118 (51%), Gaps = 7/118 (5%)
Query: 108 GIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSN 167
G + ++ M +V E + KLS+L + + ++G++G V GM+ FQ+IA ++
Sbjct: 178 GYAEAVEGMQEVG-EDENMAMEHKLSYLALIGAIAPMIGLMGTVYGMILSFQTIANSATS 236
Query: 168 NVVS--IPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQM----EGFANEFSA 219
S GI +L + L GL V+IP+ I Y+ +F++++ E N FS+
Sbjct: 237 PKPSELADGISTALFTTLEGLTVAIPAMIFYSLLRNRVARFSLEVGMISESLMNRFSS 294
>gi|78047808|ref|YP_363983.1| biopolymer transport ExbB protein [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|78036238|emb|CAJ23929.1| biopolymer transport ExbB protein [Xanthomonas campestris pv.
vesicatoria str. 85-10]
Length = 183
Score = 43.1 bits (100), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISILLGLCVSI 190
L+ LG+++SAG L+G+LG V+GM+ F I + +V + GI ++L+ G+ +++
Sbjct: 70 LNALGTIASAGPLLGLLGTVVGMIQMFLGILDHGVGDVNQLAGGIGKALVCTATGMIIAV 129
Query: 191 PSSIAYNKFIEDSKKFAMQME 211
P+ +A+ F + ++ME
Sbjct: 130 PALMAHRFFKGRIAGYIIEME 150
>gi|313672600|ref|YP_004050711.1| mota/tolq/exbb proton channel [Calditerrivibrio nitroreducens DSM
19672]
gi|312939356|gb|ADR18548.1| MotA/TolQ/ExbB proton channel [Calditerrivibrio nitroreducens DSM
19672]
Length = 203
Score = 43.1 bits (100), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 57/101 (56%), Gaps = 1/101 (0%)
Query: 112 RIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVS 171
R+ ++ A + E++ + L L +++S L+G LG VLGM+ F +A + N+ +
Sbjct: 87 RLTEFVEEAGSFEVQRLERFLPTLQTVASLAPLLGFLGTVLGMIQTFMVMANQGNANIQA 146
Query: 172 IP-GIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
+ GI +L++ GL V++P+ I Y+ + K ++++E
Sbjct: 147 LSGGIAVALLTTAAGLFVAVPTVIFYHIIRHRADKISLELE 187
>gi|300310500|ref|YP_003774592.1| biopolymer transport ExbB-like transmembrane protein
[Herbaspirillum seropedicae SmR1]
gi|300073285|gb|ADJ62684.1| biopolymer transport ExbB-like transmembrane protein
[Herbaspirillum seropedicae SmR1]
Length = 201
Score = 43.1 bits (100), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 90/207 (43%), Gaps = 23/207 (11%)
Query: 22 LAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQ-------FREFEQLFWSGQSLETVCK 74
LA I L I SI+ +++I++ + LRR + +++ SG+ + V
Sbjct: 6 LAAGWPIWPLLIASIIGLALVIER---LVYLRRSRILPPDLLNQVVRVYQSGRITDDVAD 62
Query: 75 SLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSF 134
L+ + +G ++ ++ D +P + A A LE L+
Sbjct: 63 KLEQNSPLG------HVLAAGLRNVD----APREVMKEAIEEAGQAAAHRLERF---LTT 109
Query: 135 LGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSI 194
LG+++S L+G+ G V+GM+ F S +N GI +L + GL +++P+ +
Sbjct: 110 LGTIASLAPLMGLFGTVVGMIEIFASQNAAGTNPAQLAHGISIALYNTGFGLAIAMPALV 169
Query: 195 AYNKFIEDSKKFAMQMEGFANEFSAIL 221
Y F F + ME A +F I+
Sbjct: 170 FYRHFRALVDGFVVDMEQQAVKFVDIV 196
>gi|260556183|ref|ZP_05828402.1| TolQ [Acinetobacter baumannii ATCC 19606]
gi|260410238|gb|EEX03537.1| TolQ [Acinetobacter baumannii ATCC 19606]
Length = 206
Score = 43.1 bits (100), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 90/208 (43%), Gaps = 36/208 (17%)
Query: 14 FALFMQMGLAV-KCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
F+++ Q AV K + +L SI +W+V I + + L++Q + QL + SL+
Sbjct: 3 FSIYWQHADAVSKTLYFILLAMSIATWTVFILRLMGTRQLKQQ--AYAQLSQAITSLKAK 60
Query: 73 CKSLKNHHNIGLA-AIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEK 131
+ L +A + +S K + DKG
Sbjct: 61 LQPLSFEQRKAVAEQALLRQISAEKANADKG----------------------------- 91
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGLCVS 189
+S LG+++S VG+ G V G+ ++ +G V+ P + E+LI LGL V+
Sbjct: 92 ISVLGTIASIAPFVGLFGTVWGIFHALVAVGKSGQAGLAQVATP-VGEALIMTGLGLAVA 150
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFANEF 217
IP+ +AYN + ++ A ++ A+
Sbjct: 151 IPAVLAYNICLRANRGLAHDLQDQAHSL 178
>gi|254515774|ref|ZP_05127834.1| TonB system biopolymer transport component [gamma proteobacterium
NOR5-3]
gi|219675496|gb|EED31862.1| TonB system biopolymer transport component [gamma proteobacterium
NOR5-3]
Length = 474
Score = 43.1 bits (100), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 117 MDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII 176
M A+ RE ++ L+ L +++ L+G+LG V GM+ FQ+I + + + ++ G I
Sbjct: 363 MSEAVMRETPKLESGLTLLKIIAAVAPLMGLLGTVTGMIVTFQAITIFGAGDPKAMAGGI 422
Query: 177 E-SLISILLGLCVSIPS 192
+LI+ +LGL V+IP+
Sbjct: 423 SGALITTVLGLLVAIPT 439
>gi|42522034|ref|NP_967414.1| putative adventurous gliding motility protein R [Bdellovibrio
bacteriovorus HD100]
gi|39574565|emb|CAE78407.1| putative adventurous gliding motility protein R [Bdellovibrio
bacteriovorus HD100]
Length = 248
Score = 43.1 bits (100), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 63/141 (44%), Gaps = 29/141 (20%)
Query: 96 KKSCDKGARSPIGI--------------QDRIDRMMDVAIARELEEITEKLSFLGSMSSA 141
++S A+ P+G+ ++ I MD + E I +++ FL ++
Sbjct: 91 RRSLQMSAKEPLGVVASAGIQAAIDMGGKEEIQLKMDEVLLEENSRIEKRIGFLAMFANV 150
Query: 142 GLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILL-----GLCVSIPSSIAY 196
LVG+LG + G++ S AG + N V I+ + IS+ + GL V++P+ I Y
Sbjct: 151 ATLVGLLGTITGLI---HSFAGIANANPVEKAAILSNGISLAMNTTAYGLIVAVPALIMY 207
Query: 197 -------NKFIEDSKKFAMQM 210
K ED K ++ +
Sbjct: 208 AVLQNRATKLSEDLNKASLNL 228
>gi|218961294|ref|YP_001741069.1| MotA/TolQ/ExbB proton channel family protein (fragment) [Candidatus
Cloacamonas acidaminovorans]
gi|167729951|emb|CAO80863.1| MotA/TolQ/ExbB proton channel family protein (fragment) [Candidatus
Cloacamonas acidaminovorans]
Length = 145
Score = 43.1 bits (100), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 60/122 (49%), Gaps = 3/122 (2%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV- 169
D I++ M+ EL + + L +L + ++ L+G LG V+GM+ F I + V
Sbjct: 24 DLINQSMEATANLELHRLEKGLGWLSTFAAIAPLIGFLGTVIGMVNVFMKIQAASQSGVD 83
Query: 170 VSI--PGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEG 227
+S+ GI +L++ + GL V I + I YN ++ + M+ A E+ + +G
Sbjct: 84 ISMLAGGIWVALLTTVGGLIVGIATIIFYNDLVQKLENIVKDMQENAVEYIIKYKKLKQG 143
Query: 228 NI 229
+
Sbjct: 144 KL 145
>gi|312143605|ref|YP_003995051.1| MotA/TolQ/ExbB proton channel [Halanaerobium sp. 'sapolanicus']
gi|311904256|gb|ADQ14697.1| MotA/TolQ/ExbB proton channel [Halanaerobium sp. 'sapolanicus']
Length = 232
Score = 43.1 bits (100), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 88/187 (47%), Gaps = 21/187 (11%)
Query: 31 LFIFSILSWSVIIQKSVNFITLR----RQFREFEQLFWSGQSLETVCKSLKNHHNIGLAA 86
L I S+ S +VII+K++ F + R + E L G L + LK + A
Sbjct: 36 LLIASVFSLAVIIEKTIFFARNKDNNFRLIKRIEILVEEGDIL-SALNELKGKKSTN-AK 93
Query: 87 IFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVG 146
+ +A++ S D R+ ++ E++++ + L L ++ L+G
Sbjct: 94 LISTALAH--NSEDPA---------RLREVLQAVGEDEIKKMEKHLPILDVVAMISPLLG 142
Query: 147 ILGAVLGMMGFFQ---SIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDS 203
+LG V+G++ F + AG + +S GI +LIS LGL ++IP++I Y+ F
Sbjct: 143 LLGTVIGIISSFNILGTAAGAANPAQIS-SGIAAALISTALGLIIAIPTAIFYSYFSHMV 201
Query: 204 KKFAMQM 210
++ A M
Sbjct: 202 ERKAHNM 208
>gi|241663983|ref|YP_002982343.1| MotA/TolQ/ExbB proton channel [Ralstonia pickettii 12D]
gi|309781425|ref|ZP_07676161.1| MotA/TolQ/ExbB proton channel family domain protein [Ralstonia sp.
5_7_47FAA]
gi|240866010|gb|ACS63671.1| MotA/TolQ/ExbB proton channel [Ralstonia pickettii 12D]
gi|308919838|gb|EFP65499.1| MotA/TolQ/ExbB proton channel family domain protein [Ralstonia sp.
5_7_47FAA]
Length = 206
Score = 43.1 bits (100), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 89/204 (43%), Gaps = 24/204 (11%)
Query: 31 LFIFSILSWSVIIQKSVNFITLRRQ-------FREFEQLFWSGQSLETVCKSLKNHHNIG 83
L I S+L+ ++II++ F+ L+R+ + E + ++ V +L+ +G
Sbjct: 15 LLIASVLALALIIER---FVALQRKKIIPPKVYDEALAVAHQRRATPEVVNTLEQGSPLG 71
Query: 84 --LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSA 141
LAA + S D + +A LE L+ LG+++S
Sbjct: 72 RLLAAALRHVVLHPNTSRDAA--------KEVVEEAGQNVAHRLERY---LNALGTIASV 120
Query: 142 GLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIE 201
L+G+ G V+GM+ F S +N GI +L + LGL V+IP+ I + F
Sbjct: 121 APLMGLFGTVVGMIEIFGSQTAAGTNPQALAHGISVALYNTALGLVVAIPTLIFWRYFRG 180
Query: 202 DSKKFAMQMEGFANEF-SAILSRQ 224
+ +++E + F AIL +
Sbjct: 181 VVDNYVVELEHLSTTFLDAILPPR 204
>gi|325917581|ref|ZP_08179781.1| biopolymer transport protein [Xanthomonas vesicatoria ATCC 35937]
gi|325536215|gb|EGD08011.1| biopolymer transport protein [Xanthomonas vesicatoria ATCC 35937]
Length = 219
Score = 43.1 bits (100), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISILLGLCVSI 190
L+ LG+++SAG L+G+LG V+GM+ F I + +V + GI ++L+ G+ +++
Sbjct: 106 LNALGTIASAGPLLGLLGTVVGMIQMFLGILDHGVGDVNQLAGGIGKALVCTATGMIIAV 165
Query: 191 PSSIAYNKFIEDSKKFAMQME 211
P+ +A+ F + ++ME
Sbjct: 166 PALMAHRFFKGRIAGYIIEME 186
>gi|166712275|ref|ZP_02243482.1| biopolymer transport protein [Xanthomonas oryzae pv. oryzicola
BLS256]
Length = 220
Score = 43.1 bits (100), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISILLGLCVSI 190
L+ LG+++SAG L+G+LG V+GM+ F I + +V + GI ++L+ G+ +++
Sbjct: 107 LNALGTIASAGPLLGLLGTVVGMIQMFLGILDHGVGDVNQLAGGIGKALVCTATGMIIAV 166
Query: 191 PSSIAYNKFIEDSKKFAMQME 211
P+ +A+ F + ++ME
Sbjct: 167 PALMAHRFFKGRIAGYIIEME 187
>gi|27364292|ref|NP_759820.1| TolR [Vibrio vulnificus CMCP6]
gi|27360410|gb|AAO09347.1| TolR [Vibrio vulnificus CMCP6]
Length = 453
Score = 43.1 bits (100), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 37/54 (68%), Gaps = 1/54 (1%)
Query: 139 SSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISILLGLCVSIP 191
+S L+G+LG V+GM+G FQ+I + + + + GI E+L++ +LGL V+IP
Sbjct: 361 ASVAPLLGLLGTVMGMIGTFQAITLFGTGDPKLMAGGISEALVTTMLGLVVAIP 414
>gi|84623834|ref|YP_451206.1| biopolymer transport protein [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|188576505|ref|YP_001913434.1| biopolymer transport protein [Xanthomonas oryzae pv. oryzae PXO99A]
gi|84367774|dbj|BAE68932.1| biopolymer transport protein [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|188520957|gb|ACD58902.1| biopolymer transport protein [Xanthomonas oryzae pv. oryzae PXO99A]
Length = 220
Score = 43.1 bits (100), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISILLGLCVSI 190
L+ LG+++SAG L+G+LG V+GM+ F I + +V + GI ++L+ G+ +++
Sbjct: 107 LNALGTIASAGPLLGLLGTVVGMIQMFLGILDHGVGDVNQLAGGIGKALVCTATGMIIAV 166
Query: 191 PSSIAYNKFIEDSKKFAMQME 211
P+ +A+ F + ++ME
Sbjct: 167 PALMAHRFFKGRIAGYIIEME 187
>gi|326798993|ref|YP_004316812.1| MotA/TolQ/ExbB proton channel [Sphingobacterium sp. 21]
gi|326549757|gb|ADZ78142.1| MotA/TolQ/ExbB proton channel [Sphingobacterium sp. 21]
Length = 277
Score = 43.1 bits (100), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 94/210 (44%), Gaps = 15/210 (7%)
Query: 14 FALFMQMGLAVKCIITLLFIFSILSWS--VIIQKSVNFITLRRQFREFEQLFWSGQSLET 71
FA+ + G V ++ LL + + S+ +I ++ + + + +G
Sbjct: 64 FAMVYKAGYIVPVLLGLLLMVIVFSFERFFVISRAAGKGNVDTFVSKVQGFLSAGNIDAA 123
Query: 72 VCKSLKNHHNIGLAAIFMSAMSEWKK-SCD---KGARSPIGIQDRIDRMMDVAIARELEE 127
+ + K ++ A + S + ++K+ S D S + IQ I+ A A E+
Sbjct: 124 IAECDKQQGSV--ANVIKSGLYKYKEASVDTTLDTEHSVLAIQKEIEE----ATALEMPM 177
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA-GYYSNNVVSIPGIIESLISILLGL 186
+ + L+ + ++ S G L G+LG V GM+ F ++A G + GI E+LI+ G+
Sbjct: 178 LEKNLTVIATLVSIGTLTGLLGTVTGMIKAFAALATGGAPDQAQLANGISEALINTATGI 237
Query: 187 CVSIPSSIAYNKFIE--DSKKFAMQMEGFA 214
S + I YN F D +++ GF+
Sbjct: 238 FTSTIAVIMYNVFTSKIDKLTYSIDEAGFS 267
>gi|257092031|ref|YP_003165672.1| MotA/TolQ/ExbB proton channel [Candidatus Accumulibacter phosphatis
clade IIA str. UW-1]
gi|257044555|gb|ACV33743.1| MotA/TolQ/ExbB proton channel [Candidatus Accumulibacter phosphatis
clade IIA str. UW-1]
Length = 219
Score = 43.1 bits (100), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 85/181 (46%), Gaps = 9/181 (4%)
Query: 31 LFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMS 90
L + SI++ ++II++ + LRR ++ G V + KN L A +
Sbjct: 32 LLLASIIAVALIIER---LVALRRA-----KVVPPGLLQRAVAEYRKNGTTPDLIA-NLE 82
Query: 91 AMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGA 150
A S + G R+ ++ + ++ A + ++ L+ LG+++S L+G+ G
Sbjct: 83 ADSPLGRVLGAGLRNVAASREIMKEAIEEAGSVVSHDLERYLTTLGTIASISPLMGLFGT 142
Query: 151 VLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQM 210
V+GM+ F S A SN + GI +L + GL ++IPS I + F F ++M
Sbjct: 143 VVGMIEIFGSQAPSGSNPIQLAHGISVALYNTGFGLLIAIPSMIFWRHFRALVDSFVIEM 202
Query: 211 E 211
+
Sbjct: 203 Q 203
>gi|317485475|ref|ZP_07944353.1| MotA/TolQ/ExbB proton channel family protein [Bilophila wadsworthia
3_1_6]
gi|316923304|gb|EFV44512.1| MotA/TolQ/ExbB proton channel family protein [Bilophila wadsworthia
3_1_6]
Length = 189
Score = 43.1 bits (100), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 55/98 (56%), Gaps = 5/98 (5%)
Query: 107 IGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYS 166
+G D + + + R++ ++ L L +++ ++G+ G V GM+ FQ+I + S
Sbjct: 68 LGTAD--EETLSLTANRQVRKLERGLGVLELITTIAPILGLTGTVTGMISTFQAIGEHGS 125
Query: 167 NNVVSI--PGIIESLISILLGLCVSIPSSIAYNKFIED 202
S+ GI E+LI+ GL V++P+ +AY+ F+E+
Sbjct: 126 RVDPSVLAGGIWEALITTAAGLLVALPAHVAYH-FLEN 162
>gi|256822595|ref|YP_003146558.1| MotA/TolQ/ExbB proton channel [Kangiella koreensis DSM 16069]
gi|256796134|gb|ACV26790.1| MotA/TolQ/ExbB proton channel [Kangiella koreensis DSM 16069]
Length = 217
Score = 43.1 bits (100), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 51/96 (53%), Gaps = 1/96 (1%)
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSI 190
L+ LGS++ L+G+LG V+GM+ F I N ++ G I E+LI+ G+ V+I
Sbjct: 117 LNTLGSIALVTPLLGLLGTVIGMIRVFTVIRVEGVGNADALAGGISEALITTAAGMAVAI 176
Query: 191 PSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
P+ + + F ++ +ME A + +L + E
Sbjct: 177 PTLVMHRHFSRRVEELVSEMEQEALKMVDVLHGERE 212
>gi|77918459|ref|YP_356274.1| TolR-like transport protein [Pelobacter carbinolicus DSM 2380]
gi|77544542|gb|ABA88104.1| outer membrane transport energization protein ExbB [Pelobacter
carbinolicus DSM 2380]
Length = 470
Score = 43.1 bits (100), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 48/91 (52%), Gaps = 7/91 (7%)
Query: 108 GIQDR------IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI 161
G+Q R I+ + AI RE + LS L ++ L+G+LG V GM+ FQ I
Sbjct: 338 GLQHRGENREIIESSLSEAILRETPRLERFLSALKVAAAVAPLLGLLGTVTGMINTFQVI 397
Query: 162 AGY-YSNNVVSIPGIIESLISILLGLCVSIP 191
+ S+ + GI E++++ +GL V+IP
Sbjct: 398 TTHGTSDPRLMAGGISEAMVTTQVGLAVAIP 428
>gi|37678432|ref|NP_933041.1| putative TolR protein [Vibrio vulnificus YJ016]
gi|320157685|ref|YP_004190064.1| motA/TolQ/ExbB proton channel family protein [Vibrio vulnificus
MO6-24/O]
gi|37197172|dbj|BAC93012.1| putative TolR protein [Vibrio vulnificus YJ016]
gi|319932997|gb|ADV87861.1| MotA/TolQ/ExbB proton channel family protein [Vibrio vulnificus
MO6-24/O]
Length = 453
Score = 43.1 bits (100), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 37/54 (68%), Gaps = 1/54 (1%)
Query: 139 SSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISILLGLCVSIP 191
+S L+G+LG V+GM+G FQ+I + + + + GI E+L++ +LGL V+IP
Sbjct: 361 ASVAPLLGLLGTVMGMIGTFQAITLFGTGDPKLMAGGISEALVTTMLGLVVAIP 414
>gi|206593901|emb|CAQ60828.1| putative biopolymer transport exbb-like (partial sequence)
transmembrane protein [Ralstonia solanacearum IPO1609]
Length = 347
Score = 43.1 bits (100), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 58/133 (43%), Gaps = 23/133 (17%)
Query: 93 SEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVL 152
S WKK K + R++R ++ LG+++S L+G+ G V+
Sbjct: 235 SGWKKPAQK-------VAHRLERYLNA---------------LGTIASVAPLMGLFGTVV 272
Query: 153 GMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEG 212
GM+ F S +N GI +L + LGL V+IP+ I + F + +++E
Sbjct: 273 GMIEIFGSQTAAGTNPQTLAHGISVALYNTALGLVVAIPTLIFWRYFRGVVDNYVVELEH 332
Query: 213 F-ANEFSAILSRQ 224
A AIL +
Sbjct: 333 LSATYLDAILPPR 345
>gi|308274267|emb|CBX30866.1| Biopolymer transport protein exbB [uncultured Desulfobacterium sp.]
Length = 141
Score = 43.1 bits (100), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLG 185
E+T++L F+ ++ S +G+LG VLG+M F +I + I G+ +L S +G
Sbjct: 51 ELTKRLHFIATVGSNAPYLGLLGTVLGIMLTFSNIGKQGLADTGQIMTGLALALKSTAVG 110
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEG 212
L V+IP+ + YN + K+ ++ E
Sbjct: 111 LVVAIPAMVLYNFLLRAVKERMLKWEA 137
>gi|221066470|ref|ZP_03542575.1| MotA/TolQ/ExbB proton channel [Comamonas testosteroni KF-1]
gi|220711493|gb|EED66861.1| MotA/TolQ/ExbB proton channel [Comamonas testosteroni KF-1]
Length = 210
Score = 42.7 bits (99), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 58/121 (47%), Gaps = 3/121 (2%)
Query: 106 PIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYY 165
P ++ + M+ A ++ + LS L +++SA L+G+LG V+GM+ F S G
Sbjct: 85 PESSEEELRSAMEGAGRAAAHKLEKYLSALATIASAAPLLGLLGTVIGMIEIFGSQPGAS 144
Query: 166 S---NNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
S N GI +L + GL V+IPS I + F + + ME + +F L
Sbjct: 145 SGAGNPAQLAHGISIALYNTAFGLMVAIPSLIFWRYFRARVDAYLLGMELASEQFVRHLG 204
Query: 223 R 223
R
Sbjct: 205 R 205
>gi|326795255|ref|YP_004313075.1| MotA/TolQ/ExbB proton channel [Marinomonas mediterranea MMB-1]
gi|326546019|gb|ADZ91239.1| MotA/TolQ/ExbB proton channel [Marinomonas mediterranea MMB-1]
Length = 204
Score = 42.7 bits (99), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 91/186 (48%), Gaps = 26/186 (13%)
Query: 35 SILSWSVIIQKSVNFITLRR-------QFRE-FEQLFWSGQSLETVCKSLKNHHNIGLAA 86
SIL+ +++I++ F TLRR Q E +L SLE + ++++ H GL++
Sbjct: 19 SILTLAIVIER---FWTLRRSRVVPKNQLSEVMARLREDRMSLEYI-RNMQQH--TGLSS 72
Query: 87 IFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVG 146
I + + K G + D + D A + + E+ +S LG++++ L+G
Sbjct: 73 ILAAGLLSSKH----------GRRVMKDSVQDAA-SHVIHELERFMSTLGTIAAISPLLG 121
Query: 147 ILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISILLGLCVSIPSSIAYNKFIEDSKK 205
+LG V+GM+ F + + N + GI E+L++ GL ++IP+ I + F +
Sbjct: 122 LLGTVVGMIKVFSVLMEEGAGNTSLLAGGISEALLTTAAGLGIAIPAIIFHRFFSRKIDE 181
Query: 206 FAMQME 211
+ ME
Sbjct: 182 LVVSME 187
>gi|212691799|ref|ZP_03299927.1| hypothetical protein BACDOR_01294 [Bacteroides dorei DSM 17855]
gi|237708609|ref|ZP_04539090.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
gi|237724123|ref|ZP_04554604.1| conserved hypothetical protein [Bacteroides sp. D4]
gi|265755207|ref|ZP_06089977.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
gi|212665700|gb|EEB26272.1| hypothetical protein BACDOR_01294 [Bacteroides dorei DSM 17855]
gi|229437583|gb|EEO47660.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4]
gi|229457309|gb|EEO63030.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
gi|263234349|gb|EEZ19939.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
Length = 238
Score = 42.7 bits (99), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 62/133 (46%), Gaps = 6/133 (4%)
Query: 96 KKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMM 155
+K + R +Q I+ ++ +A+ + + ++S ++G LG V GM+
Sbjct: 109 EKGISRMGRPVADVQAAIENAGNIEVAK----LENGFPVIATVSGGAPMLGFLGTVTGMV 164
Query: 156 GFFQSIAGYYSNNVVSI--PGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGF 213
F +A +N +++ GI E++I+ + GL V I + AYN + K QME
Sbjct: 165 RAFWEMANAGNNIDITLLSGGIYEAMITTVGGLIVGIAAMFAYNYLVVRVDKVVGQMEAR 224
Query: 214 ANEFSAILSRQTE 226
+F +L+ +
Sbjct: 225 TMDFMDLLNEPVQ 237
>gi|88802201|ref|ZP_01117728.1| putative biopolymer transport protein [Polaribacter irgensii 23-P]
gi|88781059|gb|EAR12237.1| putative biopolymer transport protein [Polaribacter irgensii 23-P]
Length = 228
Score = 42.7 bits (99), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 59/116 (50%), Gaps = 4/116 (3%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA---GYYSN 167
D I+ ++ A E+ ++ + +S L ++S ++G LG V+GM+ IA G
Sbjct: 112 DDINTAIETAGKLEVYQLEKNVSVLATISGVAPMIGFLGTVIGMIIAIHEIANAGGQIDI 171
Query: 168 NVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
++S G+ ++ + + GL V I + + YN + + K QME + EF +L+
Sbjct: 172 KLLS-DGLYTAMTTTVGGLIVGIIAYMTYNHLVVKTDKVVYQMEAKSVEFLDLLNE 226
>gi|289672761|ref|ZP_06493651.1| biopolymer transport protein ExbB [Pseudomonas syringae pv.
syringae FF5]
Length = 79
Score = 42.7 bits (99), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 32/51 (62%)
Query: 24 VKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCK 74
V ++ L +FS+LSW++++ KS ++ + Q ++F ++FWS L T +
Sbjct: 3 VPAVLWALILFSVLSWALLLIKSAQYVRQKSQNKQFTKVFWSAPDLLTAAE 53
>gi|58581922|ref|YP_200938.1| biopolymer transport protein [Xanthomonas oryzae pv. oryzae
KACC10331]
gi|58426516|gb|AAW75553.1| biopolymer transport protein [Xanthomonas oryzae pv. oryzae
KACC10331]
Length = 246
Score = 42.7 bits (99), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISILLGLCVSI 190
L+ LG+++SAG L+G+LG V+GM+ F I + +V + GI ++L+ G+ +++
Sbjct: 133 LNALGTIASAGPLLGLLGTVVGMIQMFLGILDHGVGDVNQLAGGIGKALVCTATGMIIAV 192
Query: 191 PSSIAYNKFIEDSKKFAMQME 211
P+ +A+ F + ++ME
Sbjct: 193 PALMAHRFFKGRIAGYIIEME 213
>gi|183219574|ref|YP_001837570.1| biopolymer transport ExbB protein [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
gi|189909715|ref|YP_001961270.1| TolQ-like protein [Leptospira biflexa serovar Patoc strain 'Patoc 1
(Ames)']
gi|106879722|emb|CAJ90430.1| biopolymer transport ExbB protein [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
gi|167774391|gb|ABZ92692.1| Transport protein, TolQ-like protein [Leptospira biflexa serovar
Patoc strain 'Patoc 1 (Ames)']
gi|167777996|gb|ABZ96294.1| Biopolymer transport ExbB protein; putative membrane protein
[Leptospira biflexa serovar Patoc strain 'Patoc 1
(Paris)']
Length = 279
Score = 42.7 bits (99), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 82/194 (42%), Gaps = 23/194 (11%)
Query: 31 LFIFSILSWSVIIQKSVNFIT---LRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAI 87
L + SI+ + VI+++ F T +R+ + + Q ++ V + LK + + +
Sbjct: 87 LLLASIVGFGVILERMYFFFTAKLVRKGYNQDLQDAIDASGMQGVDEFLKANEGQRITDV 146
Query: 88 FMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI----TEKLSFLGSMSSAGL 143
+ M + + I RE E+ + L+ L ++S+
Sbjct: 147 LKNGME---------------VSQNDPEIFAAGIEREAGEVMTLLEKGLTVLSAVSTIAP 191
Query: 144 LVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIED 202
LVG LG V GM+ F +IA N V GI E+LI+ GL V+IP+ Y
Sbjct: 192 LVGFLGTVSGMINAFDAIANADQVNAKVVAGGIKEALITTAAGLIVAIPAMTFYQYLQGR 251
Query: 203 SKKFAMQMEGFANE 216
F ++E AN+
Sbjct: 252 VGFFTSEVEEAANK 265
>gi|85712661|ref|ZP_01043707.1| TonB system biopolymer transport component [Idiomarina baltica
OS145]
gi|85693511|gb|EAQ31463.1| TonB system biopolymer transport component [Idiomarina baltica
OS145]
Length = 456
Score = 42.7 bits (99), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 51/89 (57%), Gaps = 1/89 (1%)
Query: 117 MDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII 176
+D AI RE +I ++ + ++ L+G+LG V+GM+G FQSI + + + + G I
Sbjct: 347 LDEAIMRETPKIESGINVVKIFAAIAPLLGLLGTVVGMIGTFQSITLFGTGDPKIMAGDI 406
Query: 177 E-SLISILLGLCVSIPSSIAYNKFIEDSK 204
+L++ +GL +IP +A++ SK
Sbjct: 407 SMALVTTAMGLIAAIPLILAHSIVASRSK 435
>gi|313680196|ref|YP_004057935.1| mota/tolq/exbb proton channel [Oceanithermus profundus DSM 14977]
gi|313152911|gb|ADR36762.1| MotA/TolQ/ExbB proton channel [Oceanithermus profundus DSM 14977]
Length = 206
Score = 42.7 bits (99), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 58/128 (45%), Gaps = 4/128 (3%)
Query: 103 ARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA 162
AR P G+ +D + A+ E + L L + L+G+LG V GM+ F +A
Sbjct: 78 ARVPFGVTA-VDAALKAALLEEESRLARGLGVLSVTAQVAPLLGLLGTVSGMIRAFNVLA 136
Query: 163 --GYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAI 220
G + +++ GI E+L + GL V+IP+ IAY+ ++E E I
Sbjct: 137 SQGQTTAKLLA-GGIGEALFTTAAGLIVAIPALIAYHYLAGRVDDILSELEQRREELLGI 195
Query: 221 LSRQTEGN 228
L+ G
Sbjct: 196 LAEVRNGE 203
>gi|192362143|ref|YP_001980995.1| MotA/TolQ/ExbB proton channel family protein [Cellvibrio japonicus
Ueda107]
gi|190688308|gb|ACE85986.1| MotA/TolQ/ExbB proton channel family protein [Cellvibrio japonicus
Ueda107]
Length = 460
Score = 42.7 bits (99), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 81/188 (43%), Gaps = 32/188 (17%)
Query: 7 AIMDISIFALFMQMGLAVKCIITLLFIFSILS--WSVIIQKSVNFITLRRQFREFEQLFW 64
A++D F + G AV +I ++ IF +L W +++ LF
Sbjct: 265 ALIDTPTFLERVDQGGAVGYVIVVIGIFGVLLGFWRILV------------------LFT 306
Query: 65 SGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARE 124
++ KS K N L + A K + ++ ++ A+ +E
Sbjct: 307 VSGKVKAQLKSQKPSTNNPLGRVLKVAEENAKVDTET-----------LELKLEEAVLKE 355
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISIL 183
I L+ L +++ L+G+LG V GM+ FQ+I + + + ++ GI +L++ +
Sbjct: 356 RPAIESGLAILKIIAAVAPLLGLLGTVTGMIETFQAITIFGAGDPKNMAGGISAALVTTV 415
Query: 184 LGLCVSIP 191
GL V+IP
Sbjct: 416 QGLVVAIP 423
>gi|121611790|ref|YP_999597.1| MotA/TolQ/ExbB proton channel [Verminephrobacter eiseniae EF01-2]
gi|121556430|gb|ABM60579.1| MotA/TolQ/ExbB proton channel [Verminephrobacter eiseniae EF01-2]
Length = 216
Score = 42.7 bits (99), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 53/106 (50%), Gaps = 11/106 (10%)
Query: 120 AIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGY--------YSNNVVS 171
A+A LE+ L L +++SA L+G+LG V+GM+ F S AG SN +
Sbjct: 102 AVAHRLEKY---LPALATIASAAPLLGLLGTVIGMIEIFGSQAGPGDMGQAIGGSNPAML 158
Query: 172 IPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEF 217
GI +L + GL V+IP+ I + F + + +E A +F
Sbjct: 159 AHGISTALYNTAFGLIVAIPALIFWRYFRARVDAYLLTLELAAEQF 204
>gi|264678957|ref|YP_003278864.1| MotA/TolQ/ExbB proton channel [Comamonas testosteroni CNB-2]
gi|299530081|ref|ZP_07043508.1| MotA/TolQ/ExbB proton channel [Comamonas testosteroni S44]
gi|262209470|gb|ACY33568.1| MotA/TolQ/ExbB proton channel [Comamonas testosteroni CNB-2]
gi|298722061|gb|EFI62991.1| MotA/TolQ/ExbB proton channel [Comamonas testosteroni S44]
Length = 210
Score = 42.7 bits (99), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 58/121 (47%), Gaps = 3/121 (2%)
Query: 106 PIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYY 165
P ++ + M+ A ++ + LS L +++SA L+G+LG V+GM+ F S G
Sbjct: 85 PESSEEELRSAMEGAGRAAAHKLEKYLSALATIASAAPLLGLLGTVIGMIEIFGSQPGAS 144
Query: 166 S---NNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
S N GI +L + GL V+IPS I + F + + ME + +F L
Sbjct: 145 SGAGNPAQLAHGISIALYNTAFGLMVAIPSLIFWRYFRARVDGYLLGMELASEQFVRHLG 204
Query: 223 R 223
R
Sbjct: 205 R 205
>gi|90414112|ref|ZP_01222094.1| putative biopolymer transport protein ExbB-related protein
[Photobacterium profundum 3TCK]
gi|90324784|gb|EAS41317.1| putative biopolymer transport protein ExbB-related protein
[Photobacterium profundum 3TCK]
Length = 449
Score = 42.7 bits (99), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 51/84 (60%), Gaps = 2/84 (2%)
Query: 115 RMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIP 173
R+++ AI E +EI + LS L +++ ++G+LG V GM+ FQ I + + + V
Sbjct: 335 RLLE-AIVDEQQEIEKGLSMLKLLAALAPMLGLLGTVTGMIETFQVITQFGNGDPKVMAG 393
Query: 174 GIIESLISILLGLCVSIPSSIAYN 197
GI +L++ +LGL ++P +A+N
Sbjct: 394 GISTALVTTVLGLISAMPLLLAHN 417
>gi|150008180|ref|YP_001302923.1| putative biopolymer transport protein ExbB [Parabacteroides
distasonis ATCC 8503]
gi|255015133|ref|ZP_05287259.1| putative biopolymer transport protein ExbB [Bacteroides sp. 2_1_7]
gi|256840632|ref|ZP_05546140.1| conserved hypothetical protein [Parabacteroides sp. D13]
gi|262381241|ref|ZP_06074379.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
gi|301309703|ref|ZP_07215642.1| MotA/TolQ/ExbB proton channel family protein [Bacteroides sp. 20_3]
gi|149936604|gb|ABR43301.1| putative biopolymer transport protein ExbB [Parabacteroides
distasonis ATCC 8503]
gi|256737904|gb|EEU51230.1| conserved hypothetical protein [Parabacteroides sp. D13]
gi|262296418|gb|EEY84348.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
gi|300831277|gb|EFK61908.1| MotA/TolQ/ExbB proton channel family protein [Bacteroides sp. 20_3]
Length = 236
Score = 42.7 bits (99), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 79/171 (46%), Gaps = 18/171 (10%)
Query: 65 SGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDR----MMDVA 120
+G+ ET +K++ + G SA++ + + AR I+ I R M DV
Sbjct: 69 AGKEDETFMNRIKDYIHEGKVD---SALNLCRSTNTPSARM---IEKGITRLGRPMNDVL 122
Query: 121 IA------RELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-- 172
+A E+ ++ + + + ++ ++G LG V GM+ F +A +N VS+
Sbjct: 123 VAIENVGNLEIAKLEKGFPLIATTAAGAPMLGFLGTVTGMVRAFFDMANAGTNVDVSLLS 182
Query: 173 PGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
GI E+L++ + GL V I + AYN + +ME EF +L+
Sbjct: 183 GGIYEALVTTVGGLVVGIITLFAYNYLVSQVDNVVNKMEARTMEFMDLLNE 233
>gi|298376391|ref|ZP_06986346.1| MotA/TolQ/ExbB proton channel family protein [Bacteroides sp.
3_1_19]
gi|298266269|gb|EFI07927.1| MotA/TolQ/ExbB proton channel family protein [Bacteroides sp.
3_1_19]
Length = 236
Score = 42.7 bits (99), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 79/171 (46%), Gaps = 18/171 (10%)
Query: 65 SGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDR----MMDVA 120
+G+ ET +K++ + G SA++ + + AR I+ I R M DV
Sbjct: 69 AGKEDETFMNRIKDYIHEGKVD---SALNLCRSTNTPSARM---IEKGITRLGRPMNDVL 122
Query: 121 IA------RELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-- 172
+A E+ ++ + + + ++ ++G LG V GM+ F +A +N VS+
Sbjct: 123 VAIENVGNLEIAKLEKGFPLIATTAAGAPMLGFLGTVTGMVRAFFDMANAGTNVDVSLLS 182
Query: 173 PGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
GI E+L++ + GL V I + AYN + +ME EF +L+
Sbjct: 183 GGIYEALVTTVGGLVVGIITLFAYNYLVSQVDNVVNKMEARTMEFMDLLNE 233
>gi|145220183|ref|YP_001130892.1| MotA/TolQ/ExbB proton channel [Prosthecochloris vibrioformis DSM
265]
gi|145206347|gb|ABP37390.1| outer membrane transport energization protein ExbB [Chlorobium
phaeovibrioides DSM 265]
Length = 248
Score = 42.7 bits (99), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 66/137 (48%), Gaps = 13/137 (9%)
Query: 78 NHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDR------IDRMMDVAIARELEEITEK 131
+ H L A+ S + + + + + + DR +++ ++ A E+ + +
Sbjct: 98 DEHQSSLGAVIRSVLDRYN------SMAALQVTDRDKMISEMEKAVEEATTMEMPLLEKN 151
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISILLGLCVSI 190
L + +++S +VG+LG LGM+ FQ++A + + V + GI E+L + LG+ I
Sbjct: 152 LVAISTIASISTMVGLLGTTLGMIRAFQAMATSGAPDAVQLSLGISEALFNTALGIVGGI 211
Query: 191 PSSIAYNKFIEDSKKFA 207
+ YN F +F+
Sbjct: 212 LGIVTYNIFTSRVDRFS 228
>gi|163783488|ref|ZP_02178479.1| hypothetical protein HG1285_08744 [Hydrogenivirga sp. 128-5-R1-1]
gi|159881252|gb|EDP74765.1| hypothetical protein HG1285_08744 [Hydrogenivirga sp. 128-5-R1-1]
Length = 208
Score = 42.7 bits (99), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 84/189 (44%), Gaps = 22/189 (11%)
Query: 31 LFIFSILSWSVIIQKSVNF---ITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAI 87
L I S++SW II++ +N + L E +L ++ K L + + +
Sbjct: 22 LIILSVISWVYIIERVINLRANLFLPSNLNEV-KLLLQKMDVDGAYKVLSLNRDT-FSRA 79
Query: 88 FMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGI 147
+A+ E+ K K + + +M+ ++ + + + L L +++S L+G+
Sbjct: 80 LRAALEEYLKGNRK--------KSDLSLLMERELSSVVPAVEKNLMLLSAIASIAPLLGL 131
Query: 148 LGAVLGMMGFFQSIAGYYSNNVVSI--PGIIESLISILLGLCVSIPSSIAY-------NK 198
G + G++ F + A + + + GI E+L + GL V+IP+ AY N
Sbjct: 132 FGTITGLIKVFSAYASVQTEEALRLLASGIGEALTAAATGLIVAIPALFAYWVFRNLGND 191
Query: 199 FIEDSKKFA 207
IE +K A
Sbjct: 192 IIEKVEKEA 200
>gi|88706386|ref|ZP_01104091.1| MotA/TolQ/ExbB proton channel [Congregibacter litoralis KT71]
gi|88699322|gb|EAQ96436.1| MotA/TolQ/ExbB proton channel [Congregibacter litoralis KT71]
Length = 474
Score = 42.7 bits (99), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 117 MDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII 176
M A+ RE ++ L+ L +++ L+G+LG V GM+ FQ+I + + + ++ G I
Sbjct: 363 MSEAVMRETPKLESGLTLLKIIAAVAPLMGLLGTVTGMIITFQAITIFGAGDPKAMAGGI 422
Query: 177 E-SLISILLGLCVSIPS 192
+LI+ +LGL V+IP+
Sbjct: 423 SGALITTVLGLLVAIPT 439
>gi|34497427|ref|NP_901642.1| biopolymer transport protein [Chromobacterium violaceum ATCC 12472]
gi|34497439|ref|NP_901654.1| biopolymer transport protein [Chromobacterium violaceum ATCC 12472]
gi|34103282|gb|AAQ59644.1| biopolymer transport protein [Chromobacterium violaceum ATCC 12472]
gi|34103294|gb|AAQ59656.1| biopolymer transport protein [Chromobacterium violaceum ATCC 12472]
Length = 248
Score = 42.7 bits (99), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 85/211 (40%), Gaps = 27/211 (12%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFRE-FE 60
N YG I AL+ Q K + +L I S +W V I V + RR ++ E
Sbjct: 34 NPYG-------IDALWSQGDFVAKGTLIILLIMSASTWYVGI---VKLLEQRRLIKQGHE 83
Query: 61 QLFWSGQSLETVCKSLKN---HHNIGLAAIFMSA--MSEWKKSCDKGARSPIGIQDRIDR 115
L G L+ L + + + A I +A E D + I D +D
Sbjct: 84 LLAHHGVDLQKAASELADEGMYSAVAQAGIEAAAEHKGELANRVDLNTWVAMAISDAVDS 143
Query: 116 MMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIP 173
+ LS + ++ S VG+ G V G+ I +G S + V+ P
Sbjct: 144 AS--------HHMQNGLSVIATVGSTAPFVGLFGTVWGIYHALVKIGTSGQASIDKVAGP 195
Query: 174 GIIESLISILLGLCVSIPSSIAYNKFIEDSK 204
+ E+LI +GL V++P+ + YN + +K
Sbjct: 196 -VGEALIMTAIGLAVAVPAVLGYNWLVRRNK 225
>gi|56460958|ref|YP_156239.1| TonB system biopolymer transport component [Idiomarina loihiensis
L2TR]
gi|56179968|gb|AAV82690.1| TonB system biopolymer transport component [Idiomarina loihiensis
L2TR]
Length = 455
Score = 42.7 bits (99), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ ++ +D AI RE + ++ + +++ L+G+LG V+GM+G FQSI + + +
Sbjct: 340 ENLELKLDEAILRETPRVESGINVIKILAAIAPLLGLLGTVVGMIGTFQSITLFGTGDPK 399
Query: 171 SIPGIIE-SLISILLGLCVSIPSSIAY 196
+ G I +L++ +GL +IP +A+
Sbjct: 400 IMAGDISMALVTTAMGLIAAIPLILAH 426
>gi|254468964|ref|ZP_05082370.1| MotA/TolQ/ExbB proton channel [beta proteobacterium KB13]
gi|207087774|gb|EDZ65057.1| MotA/TolQ/ExbB proton channel [beta proteobacterium KB13]
Length = 201
Score = 42.4 bits (98), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 68/136 (50%), Gaps = 13/136 (9%)
Query: 76 LKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFL 135
L+ H +G IF +A+ D + SP I++ I+ A+ +LE+ LS L
Sbjct: 64 LREHSYLG--EIFATAL-------DHISSSPGLIKESIEET-GRAVFHKLEK---YLSTL 110
Query: 136 GSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIA 195
G++++ L+G+ G ++GM+ F S ++ V GI +L + G+ V++P+ I
Sbjct: 111 GTIATVAPLLGLFGTIIGMVELFSSFTSSGADVTVFARGISIALYNTAGGIVVAVPAMIM 170
Query: 196 YNKFIEDSKKFAMQME 211
Y F + ++ME
Sbjct: 171 YRFFKNKVESLIVEME 186
>gi|46447181|ref|YP_008546.1| putative biopolymer transport protein exbB [Candidatus
Protochlamydia amoebophila UWE25]
gi|46400822|emb|CAF24271.1| putative biopolymer transport protein exbB [Candidatus
Protochlamydia amoebophila UWE25]
Length = 241
Score = 42.4 bits (98), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 62/121 (51%), Gaps = 4/121 (3%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQS--IAGYYSN 167
+++I+ M+++ E+ + L ++ L+G+LG VLG + F ++G
Sbjct: 120 KEQIESAMEISGLVEIARLERNAKILSIIAYIAPLIGLLGTVLGFIQAFSEMRLSGLVDI 179
Query: 168 NVVSIPGIIE-SLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEF-SAILSRQT 225
+ I +E +L++ GL V+IPS IAYN + + F ++++ + E +L R+
Sbjct: 180 SATRIGEAMEYALVTTAAGLVVAIPSVIAYNYLVSRVEGFVLEIQTASAEIVDLLLDREE 239
Query: 226 E 226
E
Sbjct: 240 E 240
>gi|308049133|ref|YP_003912699.1| MotA/TolQ/ExbB proton channel [Ferrimonas balearica DSM 9799]
gi|307631323|gb|ADN75625.1| MotA/TolQ/ExbB proton channel [Ferrimonas balearica DSM 9799]
Length = 435
Score = 42.4 bits (98), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 120 AIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIES 178
AI E + + + LS L M++ ++G+LG V GM+ FQ I Y + + V GI +
Sbjct: 326 AIVNEQQGLEKGLSMLKLMAAIAPMLGLLGTVTGMIETFQVITQYGNGDPKVMAGGISMA 385
Query: 179 LISILLGLCVSIPSSIAYN 197
L++ +LGL ++P +A+N
Sbjct: 386 LVTTVLGLVAAMPLLLAHN 404
>gi|189347445|ref|YP_001943974.1| MotA/TolQ/ExbB proton channel [Chlorobium limicola DSM 245]
gi|189341592|gb|ACD90995.1| MotA/TolQ/ExbB proton channel [Chlorobium limicola DSM 245]
Length = 248
Score = 42.4 bits (98), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 70/154 (45%), Gaps = 4/154 (2%)
Query: 55 QF-REFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRI 113
QF + +Q +G E + K + H L+A+ + + ++K +
Sbjct: 76 QFVQSLKQDIENGSIDEAIAKC--DDHQSSLSAVLRAVLDRYRKMVSMNVTDRDKKISEM 133
Query: 114 DRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP 173
++ ++ A E+ + + L + +++S +VG+LG LGM+ F ++A + + V +
Sbjct: 134 EKAVEEATVMEMPLLEKNLVAISTIASISTMVGLLGTTLGMIRAFAAMATSGAPDAVQLS 193
Query: 174 -GIIESLISILLGLCVSIPSSIAYNKFIEDSKKF 206
GI E+L + LG+ I + YN F F
Sbjct: 194 MGISEALFNTALGIVGGIMGIVTYNVFTNKVDHF 227
>gi|317052096|ref|YP_004113212.1| MotA/TolQ/ExbB proton channel [Desulfurispirillum indicum S5]
gi|316947180|gb|ADU66656.1| MotA/TolQ/ExbB proton channel [Desulfurispirillum indicum S5]
Length = 455
Score = 42.4 bits (98), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 52/96 (54%), Gaps = 1/96 (1%)
Query: 117 MDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGI 175
+D I RE+ + L+ + +++ L+G+LG V+GM+ FQ+I + + + + GI
Sbjct: 340 LDEEILREVPRLEWGLTTIKILAAVAPLLGLLGTVVGMIETFQAITLFGTGDPQLMAGGI 399
Query: 176 IESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
++L++ LGL V+IP +N S+ ME
Sbjct: 400 SQALVTTALGLVVAIPLLFLHNLATAKSRALINTME 435
>gi|82702158|ref|YP_411724.1| MotA/TolQ/ExbB proton channel [Nitrosospira multiformis ATCC 25196]
gi|82410223|gb|ABB74332.1| MotA/TolQ/ExbB proton channel [Nitrosospira multiformis ATCC 25196]
Length = 203
Score = 42.4 bits (98), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 48/93 (51%), Gaps = 4/93 (4%)
Query: 120 AIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIES 178
A+A +LE L +GS+S L+G+LG ++GM+ F S NN + GI +
Sbjct: 98 AVAHQLERYLTTLGTIGSISP---LMGLLGTLVGMIEIFGSNTPVSGNNPAQLAHGISVA 154
Query: 179 LISILLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
L + G+ V+IPS + Y F + ++ME
Sbjct: 155 LYNAAFGILVAIPSIMFYRYFRAKVDELVVEME 187
>gi|78187442|ref|YP_375485.1| MotA/TolQ/ExbB proton channel family protein [Chlorobium luteolum
DSM 273]
gi|78167344|gb|ABB24442.1| outer membrane transport energization protein ExbB [Chlorobium
luteolum DSM 273]
Length = 248
Score = 42.4 bits (98), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 68/141 (48%), Gaps = 13/141 (9%)
Query: 78 NHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDR------IDRMMDVAIARELEEITEK 131
+ H L A+ S + + + + + DR +++ ++ A E+ + +
Sbjct: 98 DDHQSSLGAVLRSVLDRYTQ------LAAFNVTDRDKKISEMEKAVEEASTMEMPLLEKN 151
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISILLGLCVSI 190
L + +++S +VG+LG +GM+ FQ++A + + V + GI E+L + LG+ I
Sbjct: 152 LVAISTIASISTMVGLLGTTMGMIRAFQAMATSGAPDAVQLSLGISEALFNTALGIVGGI 211
Query: 191 PSSIAYNKFIEDSKKFAMQME 211
+AYN F +F+ ++
Sbjct: 212 LGIVAYNIFTTRVDRFSYMID 232
>gi|74316375|ref|YP_314115.1| putative transport protein ExbB2 [Thiobacillus denitrificans ATCC
25259]
gi|74055870|gb|AAZ96310.1| putative transport protein ExbB2 [Thiobacillus denitrificans ATCC
25259]
Length = 555
Score = 42.4 bits (98), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 51/108 (47%), Gaps = 1/108 (0%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
D I +D + RE +T + L S G +G+LG VLG+M F IA NV
Sbjct: 438 DSIRASLDTGMVRESGLLTRLMVLLTIAISGGPFIGLLGTVLGVMITFAVIAATGDVNVN 497
Query: 171 SI-PGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEF 217
+I PGI +L++ G+ V+IP+ YN K M F +E
Sbjct: 498 AIAPGIAAALMATAAGMAVAIPALFGYNYLNSRIKTITSDMRVFIDEL 545
>gi|34540437|ref|NP_904916.1| MotA/TolQ/ExbB proton channel family protein [Porphyromonas
gingivalis W83]
gi|188994536|ref|YP_001928788.1| probable biopolymer transport protein [Porphyromonas gingivalis
ATCC 33277]
gi|34396750|gb|AAQ65815.1| MotA/TolQ/ExbB proton channel family protein [Porphyromonas
gingivalis W83]
gi|188594216|dbj|BAG33191.1| probable biopolymer transport protein [Porphyromonas gingivalis
ATCC 33277]
Length = 204
Score = 42.4 bits (98), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 90/196 (45%), Gaps = 15/196 (7%)
Query: 38 SWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKK 97
W +I+ +++ + + R+ ++ +G+ + + +K++ + G SAM +
Sbjct: 8 GWIMIVLAALSLLAIYIFVRKVMEIRAAGREDNSFMERIKDYIHEGK---IESAMRLCQD 64
Query: 98 SCDKGARSPIGIQDRIDRMM-DVAIARE------LEEITEKLSFLGSMSSAGLLVGILGA 150
AR R+ R M D+ +A E + ++ + L + ++++ ++G LG
Sbjct: 65 RATPSARMIAKGITRLGRPMNDILVAVENTGNIEIGKLEKGLPIIATIAAGAPMIGFLGT 124
Query: 151 VLGMMGFFQSIAGYYSNNVVSIP----GIIESLISILLGLCVSIPSSIAYNKFIEDSKKF 206
V GM+ F +A N V + GI E+L++ + GL V I + AYN + K
Sbjct: 125 VTGMVRAFFDMANA-GNGGVDVALLSGGIYEALVTTVGGLVVGIVTLFAYNYLVAQVDKV 183
Query: 207 AMQMEGFANEFSAILS 222
+ME EF +L+
Sbjct: 184 VNKMETKTLEFMDLLN 199
>gi|256820802|ref|YP_003142081.1| MotA/TolQ/ExbB proton channel [Capnocytophaga ochracea DSM 7271]
gi|256582385|gb|ACU93520.1| MotA/TolQ/ExbB proton channel [Capnocytophaga ochracea DSM 7271]
Length = 234
Score = 42.4 bits (98), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 58/115 (50%), Gaps = 2/115 (1%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNN 168
+ I++ ++ A E+ + + + L +++ AG ++G LG V+GM+ F + AG +
Sbjct: 118 EDINKAIENAGTLEVYNLEKNTAILATIAGAGPMIGFLGTVVGMIMSFHEMASAGGQAEM 177
Query: 169 VVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
GI ++ + + GL V I + + YN + + K ME A EF +L+
Sbjct: 178 GSLASGIYTAMATTVAGLIVGIIAYVGYNHLVVKTDKVVHLMEANAVEFLDLLNE 232
>gi|220916712|ref|YP_002492016.1| MotA/TolQ/ExbB proton channel [Anaeromyxobacter dehalogenans 2CP-1]
gi|219954566|gb|ACL64950.1| MotA/TolQ/ExbB proton channel [Anaeromyxobacter dehalogenans 2CP-1]
Length = 221
Score = 42.4 bits (98), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 91/218 (41%), Gaps = 18/218 (8%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
M ++F LF + G + ++ LL S+ S ++I+++ F R L +G+
Sbjct: 1 MTNALFHLFTRAG--AEWVMFLLAALSVASVTLILERLAWFARRRAPVPGLLPLLRAGRL 58
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
E L+ GL A A + D P + + + AIA
Sbjct: 59 EEA---RLRVGQLRGLEAEVARA------AIDAAEGGPASVHEAVA----CAIAEARPGY 105
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG---IIESLISILLG 185
LSFLG++ + +G+ G V+G++ F +A + I E+L++ G
Sbjct: 106 ERALSFLGTLGNNAPFLGLFGTVIGVIQAFSDLAVGGPRGAGAAAVMAGISEALVATAAG 165
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
+ V+IP+ +A+N + K + E + +A L R
Sbjct: 166 ILVAIPAVVAFNGYQRWLKALVQRAEAIEHALAAHLER 203
>gi|91204007|emb|CAJ71660.1| hypothetical protein kustc0915 [Candidatus Kuenenia
stuttgartiensis]
Length = 489
Score = 42.4 bits (98), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISILLGLCVSI 190
L F+ +S+ L+G+LG V G++ F+ I + S +V ++ GI E+LI+ GL V+I
Sbjct: 377 LPFIAISASSAPLLGLLGTVTGIINTFKLITVFGSGDVKTLSGGISEALITTKFGLIVAI 436
Query: 191 PSSIAYNKFIEDSKKFAMQMEGFANEF 217
PS + + ++ QM+ A F
Sbjct: 437 PSLLLHAFLSRKARSVVDQMQKAAAAF 463
>gi|213586287|ref|ZP_03368113.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Typhi str. E98-0664]
Length = 50
Score = 42.4 bits (98), Expect = 0.049, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 30/48 (62%)
Query: 173 PGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAI 220
PGI E+LI+ +GL +IP+ +AYN+ + K + + F EF+AI
Sbjct: 3 PGIAEALIATAIGLFAAIPAVMAYNRLNQRVNKLELNYDNFMEEFTAI 50
>gi|3913626|sp|P95375|EXBB_NEIMC RecName: Full=Biopolymer transport protein exbB
gi|1732297|gb|AAC44835.1| ExbB [Neisseria meningitidis]
Length = 220
Score = 42.4 bits (98), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 35/205 (17%), Positives = 91/205 (44%), Gaps = 7/205 (3%)
Query: 27 IITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAA 86
+ L+ + SI++W +++ + + R+ ++ SL + ++ + L+
Sbjct: 17 VFVLMLLMSIVTWCLVVLRCIKLYRARKGNAAVKRHMRDNLSLNEAVEKVR-AVDAPLSK 75
Query: 87 IFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSF----LGSMSSAG 142
+ A+ ++ ++ + S + ++ + + I + +I + + L S+ +
Sbjct: 76 LAQEAL-QFYRNYRRNEASELAQALPLNEYLVIQIRNSMAQIMRRFDYGMTALASIGATA 134
Query: 143 LLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCVSIPSSIAYNKFIE 201
+G+ G V G+ +I ++ ++ G I E+L++ GL V+IP+ +AYN
Sbjct: 135 PFIGLFGTVWGIYHALINIGQSGQMSIAAVAGPIGEALVATAAGLFVAIPAVLAYNFLNR 194
Query: 202 DSKKFAMQMEGFANEFSAILSRQTE 226
+K ++ A++ L Q +
Sbjct: 195 GTKILTQDLDAMAHDLHVRLLNQKD 219
>gi|325140812|gb|EGC63322.1| biopolymer transport protein ExbB [Neisseria meningitidis CU385]
Length = 220
Score = 42.4 bits (98), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 35/205 (17%), Positives = 90/205 (43%), Gaps = 7/205 (3%)
Query: 27 IITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAA 86
+ L+ + SI++W +++ + + R+ ++ SL + ++ + L+
Sbjct: 17 VFVLMLLMSIVTWCLVVLRCIKLYRARKGNAAVKRHMRDTLSLNDAVEKVR-AVDAPLSK 75
Query: 87 IFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSF----LGSMSSAG 142
+ A+ ++ + + S + ++ + + I + +I + + L S+ +
Sbjct: 76 LAQEALQSYR-NYRRNEASELAQALPLNEYLVIQIRNSMAQIMRRFDYGMTALASIGATA 134
Query: 143 LLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCVSIPSSIAYNKFIE 201
+G+ G V G+ +I ++ ++ G I E+L++ GL V+IP+ +AYN
Sbjct: 135 PFIGLFGTVWGIYHALINIGQSGQMSIAAVAGPIGEALVATAAGLFVAIPAVLAYNFLNR 194
Query: 202 DSKKFAMQMEGFANEFSAILSRQTE 226
+K ++ A++ L Q +
Sbjct: 195 GTKILPQDLDAMAHDLHVRLLNQKD 219
>gi|315223952|ref|ZP_07865796.1| MotA/TolQ/ExbB proton channel family protein [Capnocytophaga
ochracea F0287]
gi|314946056|gb|EFS98061.1| MotA/TolQ/ExbB proton channel family protein [Capnocytophaga
ochracea F0287]
Length = 234
Score = 42.4 bits (98), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 58/115 (50%), Gaps = 2/115 (1%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNN 168
+ I++ ++ A E+ + + + L +++ AG ++G LG V+GM+ F + AG +
Sbjct: 118 EDINKAIENAGTLEVYNLEKNTAILATIAGAGPMIGFLGTVVGMIMSFHEMASAGGQAEM 177
Query: 169 VVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
GI ++ + + GL V I + + YN + + K ME A EF +L+
Sbjct: 178 GSLASGIYTAMATTVAGLIVGIIAYVGYNHLVVKTDKVVHLMEANAVEFLDLLNE 232
>gi|332526255|ref|ZP_08402384.1| putative biopolymer transport exbB-like transmembrane protein
[Rubrivivax benzoatilyticus JA2]
gi|332110089|gb|EGJ10717.1| putative biopolymer transport exbB-like transmembrane protein
[Rubrivivax benzoatilyticus JA2]
Length = 212
Score = 42.4 bits (98), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 58/123 (47%), Gaps = 3/123 (2%)
Query: 109 IQDRIDRMMDVAIARELEEITEK-LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSN 167
IQ++ R R TE+ L+ LG++++A L+G+ G V+GM+ F S A +
Sbjct: 87 IQEQALRQAMENAGRTAVHTTERYLNTLGTIAAAAPLLGLFGTVIGMIEIFGSQAPTGAT 146
Query: 168 NVVSIP-GIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR-QT 225
N + GI +L + GL ++IPS + Y F F + ME A L R
Sbjct: 147 NPQMLAHGISVALYNTAFGLIIAIPSLMFYRYFRGRVDAFQLTMELAAERLVPHLMRFAV 206
Query: 226 EGN 228
GN
Sbjct: 207 RGN 209
>gi|330878433|gb|EGH12582.1| biopolymer transport protein ExbB [Pseudomonas syringae pv.
morsprunorum str. M302280PT]
Length = 100
Score = 42.4 bits (98), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 147 ILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCVSIPSSIAYNKFIEDSKK 205
+ G V G+M QSI S ++ ++ G I +L++ +G+ V++P+ + YN F+ K
Sbjct: 1 MFGTVWGIMEALQSIGVTGSASLEAVAGPIGHALVATGVGIAVAVPAVLIYNFFLRRLKL 60
Query: 206 FAMQMEGFANEFSAILSR 223
M+ FA++F A+ R
Sbjct: 61 AVADMDDFAHDFDALAQR 78
>gi|197121919|ref|YP_002133870.1| MotA/TolQ/ExbB proton channel [Anaeromyxobacter sp. K]
gi|196171768|gb|ACG72741.1| MotA/TolQ/ExbB proton channel [Anaeromyxobacter sp. K]
Length = 221
Score = 42.4 bits (98), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 91/219 (41%), Gaps = 18/219 (8%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
M ++F LF + G + ++ LL S+ S ++I+++ F R L +G+
Sbjct: 1 MTNALFHLFTRAG--AEWVMFLLAALSVASVTLILERLAWFARRRAPVPGLLPLLRAGRL 58
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
E L+ GL A A + D P + + + AIA
Sbjct: 59 EEA---RLRVGRLRGLEAEVARA------ALDAAEGGPASVHEAVA----CAIAEARPGY 105
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG---IIESLISILLG 185
LSFLG++ + +G+ G V+G++ F +A + I E+L++ G
Sbjct: 106 ERALSFLGTLGNNAPFLGLFGTVIGVIQAFSDLAVGGPRGAGAAAVMAGISEALVATAAG 165
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+ V+IP+ +A+N + K + E + +A L R
Sbjct: 166 ILVAIPAVVAFNGYQRWLKALVQRAEAIEHALAAHLERD 204
>gi|121534693|ref|ZP_01666514.1| MotA/TolQ/ExbB proton channel [Thermosinus carboxydivorans Nor1]
gi|121306713|gb|EAX47634.1| MotA/TolQ/ExbB proton channel [Thermosinus carboxydivorans Nor1]
Length = 205
Score = 42.4 bits (98), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 64/116 (55%), Gaps = 6/116 (5%)
Query: 97 KSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMG 156
K KGA P +Q+ ++ +A+AR + E+L +L ++ + L+G+LG V+GM+
Sbjct: 81 KVLQKGALDPALLQNALEGAAALAVAR----LRERLGYLETIVTLAPLLGLLGTVIGMIN 136
Query: 157 FFQSIAGYYSNNVVSIP-GIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
F SI S +I G+ E+L++ GLCV++ + +A++ F + + ME
Sbjct: 137 SF-SIMAIRSGQPHAITGGVGEALVATAAGLCVAVMALVAHSYFAQRLDRIITGME 191
>gi|86140668|ref|ZP_01059227.1| putative biopolymer transport protein [Leeuwenhoekiella blandensis
MED217]
gi|85832610|gb|EAQ51059.1| putative biopolymer transport protein [Leeuwenhoekiella blandensis
MED217]
Length = 234
Score = 42.4 bits (98), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 51/102 (50%), Gaps = 2/102 (1%)
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVS--IPGIIESLIS 181
E+ + + +S L +++ A ++G LG V+GM+ F +A + GI ++ +
Sbjct: 131 EVYRLEKNVSVLATIAGAAPMIGFLGTVIGMVLAFHQLATSSGQAEMGNLAEGIYTAMTT 190
Query: 182 ILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
+ GL V I + I YN + + K QME A +F +L+
Sbjct: 191 TVAGLIVGIIAYIGYNHLVVRTDKVVHQMEATAVDFLDMLNE 232
>gi|15677575|ref|NP_274732.1| biopolymer transport protein [Neisseria meningitidis MC58]
gi|121635363|ref|YP_975608.1| biopolymer transport protein [Neisseria meningitidis FAM18]
gi|218768741|ref|YP_002343253.1| biopolymer transport protein [Neisseria meningitidis Z2491]
gi|254805477|ref|YP_003083698.1| MotA/TolQ/ExbB proton channel family protein [Neisseria
meningitidis alpha14]
gi|54037072|sp|P64100|EXBB_NEIMB RecName: Full=Biopolymer transport protein exbB
gi|54040986|sp|P64099|EXBB_NEIMA RecName: Full=Biopolymer transport protein exbB
gi|7226984|gb|AAF42074.1| biopolymer transport protein ExbB [Neisseria meningitidis MC58]
gi|120867069|emb|CAM10834.1| biopolymer transport protein [Neisseria meningitidis FAM18]
gi|121052749|emb|CAM09093.1| biopolymer transport protein [Neisseria meningitidis Z2491]
gi|254669019|emb|CBA07428.1| MotA/TolQ/ExbB proton channel family protein [Neisseria
meningitidis alpha14]
gi|254671783|emb|CBA09642.1| MotA/TolQ/ExbB proton channel family protein [Neisseria
meningitidis alpha153]
gi|254672764|emb|CBA06802.1| MotA/TolQ/ExbB proton channel family protein [Neisseria
meningitidis alpha275]
gi|261392051|emb|CAX49543.1| biopolymer transport ExbB protein [Neisseria meningitidis 8013]
gi|308389847|gb|ADO32167.1| biopolymer transport protein [Neisseria meningitidis alpha710]
gi|316985741|gb|EFV64686.1| motA/TolQ/ExbB proton channel family protein [Neisseria
meningitidis H44/76]
gi|319410977|emb|CBY91373.1| biopolymer transport ExbB protein [Neisseria meningitidis WUE 2594]
gi|325128734|gb|EGC51597.1| biopolymer transport protein ExbB [Neisseria meningitidis N1568]
gi|325132784|gb|EGC55464.1| biopolymer transport protein ExbB [Neisseria meningitidis M6190]
gi|325133615|gb|EGC56273.1| biopolymer transport protein ExbB [Neisseria meningitidis M13399]
gi|325135669|gb|EGC58283.1| biopolymer transport protein ExbB [Neisseria meningitidis M0579]
gi|325138866|gb|EGC61417.1| biopolymer transport protein ExbB [Neisseria meningitidis ES14902]
gi|325145083|gb|EGC67366.1| biopolymer transport protein ExbB [Neisseria meningitidis
M01-240013]
gi|325198820|gb|ADY94276.1| biopolymer transport protein ExbB [Neisseria meningitidis G2136]
gi|325199682|gb|ADY95137.1| biopolymer transport protein ExbB [Neisseria meningitidis H44/76]
gi|325201621|gb|ADY97075.1| biopolymer transport protein ExbB [Neisseria meningitidis
M01-240149]
gi|325204684|gb|ADZ00138.1| biopolymer transport protein ExbB [Neisseria meningitidis
M01-240355]
gi|325205561|gb|ADZ01014.1| biopolymer transport protein ExbB [Neisseria meningitidis
M04-240196]
gi|325208644|gb|ADZ04096.1| biopolymer transport protein ExbB [Neisseria meningitidis NZ-05/33]
Length = 220
Score = 42.4 bits (98), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 35/205 (17%), Positives = 90/205 (43%), Gaps = 7/205 (3%)
Query: 27 IITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAA 86
+ L+ + SI++W +++ + + R+ ++ SL + ++ + L+
Sbjct: 17 VFVLMLLMSIVTWCLVVLRCIKLYRARKGNAAVKRHMRDTLSLNDAVEKVR-AVDAPLSK 75
Query: 87 IFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSF----LGSMSSAG 142
+ A+ ++ + + S + ++ + + I + +I + + L S+ +
Sbjct: 76 LAQEALQSYR-NYRRNEASELAQALPLNEYLVIQIRNSMAQIMRRFDYGMTALASIGATA 134
Query: 143 LLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCVSIPSSIAYNKFIE 201
+G+ G V G+ +I ++ ++ G I E+L++ GL V+IP+ +AYN
Sbjct: 135 PFIGLFGTVWGIYHALINIGQSGQMSIAAVAGPIGEALVATAAGLFVAIPAVLAYNFLNR 194
Query: 202 DSKKFAMQMEGFANEFSAILSRQTE 226
+K ++ A++ L Q +
Sbjct: 195 GTKILTQDLDAMAHDLHVRLLNQKD 219
>gi|312897627|ref|ZP_07757044.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Megasphaera micronuciformis F0359]
gi|310621260|gb|EFQ04803.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Megasphaera micronuciformis F0359]
Length = 207
Score = 42.4 bits (98), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 80/175 (45%), Gaps = 23/175 (13%)
Query: 31 LFIFSILSWSVIIQKSVNFITLRRQ----FREFEQLFWSG--QSLETVCKSLKNHHNIGL 84
LFI S+++ ++ I++ + + R++ F E SG + E VC+ H +
Sbjct: 21 LFILSVITIAIAIERGIYYKRNRKKSQSFFSHIEGAAKSGDWKVAEEVCE----HSQTAI 76
Query: 85 AAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLL 144
+ I + + + S ++ +S Q +A E L +L ++ + L
Sbjct: 77 SRIIAAGLQD--ASTEESMKSAFSEQ----------MALESAAFQRYLDYLSAIVTVAPL 124
Query: 145 VGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKF 199
+G+LG V GM+ F + G + ++ G+ E+L++ GLCV+I + Y F
Sbjct: 125 LGLLGTVTGMITTFSVLDGGMGASAIT-GGVGEALVATATGLCVAIIAFAVYTFF 178
>gi|298373799|ref|ZP_06983788.1| MotA/TolQ/ExbB proton channel family protein [Bacteroidetes oral
taxon 274 str. F0058]
gi|298274851|gb|EFI16403.1| MotA/TolQ/ExbB proton channel family protein [Bacteroidetes oral
taxon 274 str. F0058]
Length = 268
Score = 42.4 bits (98), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 94/193 (48%), Gaps = 14/193 (7%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWS--VIIQKSVNFITLRRQFREFEQLFWSG-- 66
I++ + G V I+TLLF +LS + K+ L + ++ +G
Sbjct: 53 INLLGTMFKGGFVVPLILTLLFTVIVLSVERFFALNKAKGKGNLIKFVANVKKELANGNI 112
Query: 67 QSLETVCKSLKNHHNIGLAAIFMSAMSEWKK--SCDKGARSPIGIQDRIDRMMDVAIARE 124
+ + +C+ + +AAI + ++++++ S D + + I ++ A A +
Sbjct: 113 DNAQKLCEKQQGS----VAAIVDAGLTKYREVESLDISKEMKV---EAIKNEIEEATALQ 165
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISIL 183
L + + L + ++S+ G L+G+ G VLGM+ FQ++AG + +++ GI E+L++
Sbjct: 166 LPSMQQNLPIIATISTLGTLMGLFGTVLGMIRSFQALAGAGGVDSMALSVGISEALVNTA 225
Query: 184 LGLCVSIPSSIAY 196
G+ + I+Y
Sbjct: 226 SGIATGALAIISY 238
>gi|269148516|gb|ACZ28653.1| MotA/TolQ/ExbB proton channel [uncultured organism]
Length = 301
Score = 42.4 bits (98), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 86/192 (44%), Gaps = 28/192 (14%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFIT--LRRQFREFEQLFWSGQS 68
++I +LF Q G ++ +L + SIL+ ++I+ K F LRR EF
Sbjct: 1 MNIASLFQQGG----PVMVVLLVLSILAVAIILAKLFQFFRSGLRRS--EF--------- 45
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGAR---SP-IGIQDRIDRMMDVAIAR- 123
+E V +L + N + S + + R P + QD + V AR
Sbjct: 46 IEPVISALNDRQNNKALELLQQQRSPVARVMESAVRCGVDPGMSAQDTEAEVSRVGSARI 105
Query: 124 -ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLI 180
+LE LS + +S L+G+LG V GM+ F + AG + + GI E+L+
Sbjct: 106 RDLESWLRGLSAIAHLSP---LLGLLGTVTGMITAFMRLEEAGNRVDPSILSGGIWEALL 162
Query: 181 SILLGLCVSIPS 192
+ GL V+IP+
Sbjct: 163 TTAFGLTVAIPA 174
>gi|317152291|ref|YP_004120339.1| MotA/TolQ/ExbB proton channel [Desulfovibrio aespoeensis Aspo-2]
gi|316942542|gb|ADU61593.1| MotA/TolQ/ExbB proton channel [Desulfovibrio aespoeensis Aspo-2]
Length = 475
Score = 42.4 bits (98), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 1/100 (1%)
Query: 123 RELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLIS 181
+EL + L L +++ L+G+LG V GM+ FQ I Y + + + GI E+LI+
Sbjct: 360 KELPMLERFLPTLNVLAAVAPLLGLLGTVTGMINTFQIITVYGTGDPRMMSGGISEALIT 419
Query: 182 ILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
LGL V++P I ++ + ME F+ L
Sbjct: 420 TQLGLAVAVPIMILHHVLERRVDRIVGDMEEKGTGFAVAL 459
>gi|161870576|ref|YP_001599748.1| biopolymer transport protein [Neisseria meningitidis 053442]
gi|304386787|ref|ZP_07369054.1| biopolymer transporter ExbB [Neisseria meningitidis ATCC 13091]
gi|161596129|gb|ABX73789.1| biopolymer transport protein [Neisseria meningitidis 053442]
gi|304339137|gb|EFM05224.1| biopolymer transporter ExbB [Neisseria meningitidis ATCC 13091]
Length = 230
Score = 42.4 bits (98), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 35/205 (17%), Positives = 90/205 (43%), Gaps = 7/205 (3%)
Query: 27 IITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAA 86
+ L+ + SI++W +++ + + R+ ++ SL + ++ + L+
Sbjct: 27 VFVLMLLMSIVTWCLVVLRCIKLYRARKGNAAVKRHMRDTLSLNDAVEKVR-AVDAPLSK 85
Query: 87 IFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSF----LGSMSSAG 142
+ A+ ++ + + S + ++ + + I + +I + + L S+ +
Sbjct: 86 LAQEALQSYR-NYRRNEASELAQALPLNEYLVIQIRNSMAQIMRRFDYGMTALASIGATA 144
Query: 143 LLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCVSIPSSIAYNKFIE 201
+G+ G V G+ +I ++ ++ G I E+L++ GL V+IP+ +AYN
Sbjct: 145 PFIGLFGTVWGIYHALINIGQSGQMSIAAVAGPIGEALVATAAGLFVAIPAVLAYNFLNR 204
Query: 202 DSKKFAMQMEGFANEFSAILSRQTE 226
+K ++ A++ L Q +
Sbjct: 205 GTKILTQDLDAMAHDLHVRLLNQKD 229
>gi|254480426|ref|ZP_05093673.1| transporter, MotA/TolQ/ExbB proton channel family, putative [marine
gamma proteobacterium HTCC2148]
gi|214039009|gb|EEB79669.1| transporter, MotA/TolQ/ExbB proton channel family, putative [marine
gamma proteobacterium HTCC2148]
Length = 196
Score = 42.4 bits (98), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISIL 183
+ ++ L+ LG++++ L+G+LG V+GM+ F I + N V GI E+LI+
Sbjct: 89 VHDLERYLNTLGTIAAISPLLGLLGTVVGMIRVFAEIMSQGTGNASVLAGGISEALITTA 148
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQME 211
GL V+IP+ + FI +++E
Sbjct: 149 AGLTVAIPALAMHRYFIGKIDAIVVELE 176
>gi|330881259|gb|EGH15408.1| biopolymer transport protein ExbB [Pseudomonas syringae pv.
glycinea str. race 4]
Length = 76
Score = 42.4 bits (98), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 31/51 (60%)
Query: 24 VKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCK 74
V ++ L +FS+LSW++++ KS ++ + Q ++F + FWS L T +
Sbjct: 10 VPAVLWALILFSVLSWALLLIKSAQYVRQKSQNKQFTKAFWSAPDLLTAAE 60
>gi|29349327|ref|NP_812830.1| putative biopolymer transport protein [Bacteroides thetaiotaomicron
VPI-5482]
gi|253570326|ref|ZP_04847735.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
gi|298384860|ref|ZP_06994419.1| MotA/TolQ/ExbB proton channel family protein [Bacteroides sp.
1_1_14]
gi|29341235|gb|AAO79024.1| putative biopolymer transport protein [Bacteroides thetaiotaomicron
VPI-5482]
gi|251840707|gb|EES68789.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
gi|298262004|gb|EFI04869.1| MotA/TolQ/ExbB proton channel family protein [Bacteroides sp.
1_1_14]
Length = 239
Score = 42.4 bits (98), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 56/106 (52%), Gaps = 3/106 (2%)
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSI--PGIIESLI 180
E+ ++ + L+ + ++S ++G LG V GM+ F +A S N+ +++ GI E++I
Sbjct: 133 EVAKLEKGLTVMATISGGAPMLGFLGTVTGMVRAFYEMANAGSGNIDITLLSGGIYEAMI 192
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+ + GL V I + AYN + + +ME EF +L+ +
Sbjct: 193 TTVGGLIVGIIAMFAYNYLVMLVDRVVNKMEARTMEFMDLLNEPAQ 238
>gi|330722473|gb|EGH00304.1| MotA/TolQ/ExbB proton channel family protein [gamma proteobacterium
IMCC2047]
Length = 212
Score = 42.4 bits (98), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 51/89 (57%), Gaps = 3/89 (3%)
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQS--IAGYYSNNVVSIPGIIESLISI 182
+ ++ L+ LG+++ L+G+LG V+GM+ F + I G + NV++ GI E+LI+
Sbjct: 100 IHDMERYLNTLGTIAVITPLLGLLGTVIGMIKVFTAIMIQGTGNANVLA-GGISEALITT 158
Query: 183 LLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
GL V+IP+ + + + + + ME
Sbjct: 159 AAGLTVAIPAVVFHRMYQRRIDELVVDME 187
>gi|297569525|ref|YP_003690869.1| MotA/TolQ/ExbB proton channel [Desulfurivibrio alkaliphilus AHT2]
gi|296925440|gb|ADH86250.1| MotA/TolQ/ExbB proton channel [Desulfurivibrio alkaliphilus AHT2]
Length = 210
Score = 42.4 bits (98), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 53/105 (50%), Gaps = 3/105 (2%)
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLIS 181
EL+ + + L +M + L+GILG V+G++ F+ + AG V+ GI ++LI+
Sbjct: 97 ELQRMRRFMGVLDTMITVAPLLGILGTVVGIINSFEMLEAAGIEEPGKVTA-GIAQALIT 155
Query: 182 ILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
GL ++I + YN F ++ + +E +A I + E
Sbjct: 156 TATGLSIAIFAVFPYNYFNARAENAVLNIEKYATSLEIIFQKTAE 200
>gi|255617567|ref|XP_002539856.1| conserved hypothetical protein [Ricinus communis]
gi|223501717|gb|EEF22528.1| conserved hypothetical protein [Ricinus communis]
Length = 121
Score = 42.4 bits (98), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 62/124 (50%), Gaps = 18/124 (14%)
Query: 20 MGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVC-----K 74
+ L V+ + L +FSI++W +I+ K+V + +Q ++F Q FWS SL+
Sbjct: 6 LNLIVQGALYGLVLFSIVTWVLILAKAVQHARVGKQDKQFTQKFWSANSLDAATALGSDA 65
Query: 75 SLKNH-HNIGLAAIFMSAM----SEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
S K+ N+G A++++ S+ + S D+ Q+ ++R + I +E + +
Sbjct: 66 SPKSRLANVGFEALYVNDTDGSGSDLEHSWDR--------QELLERQLRQQIQKEYQSLE 117
Query: 130 EKLS 133
L+
Sbjct: 118 SGLA 121
>gi|323142694|ref|ZP_08077412.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Succinatimonas hippei YIT 12066]
gi|322417535|gb|EFY08151.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Succinatimonas hippei YIT 12066]
Length = 203
Score = 42.4 bits (98), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 90/218 (41%), Gaps = 41/218 (18%)
Query: 5 GLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFW 64
G+AI+ I I A+F I + I++ LSW REF+Q F
Sbjct: 14 GVAIVIIGIAAVF---------ICSRSLIYTALSW-----------------REFKQRFL 47
Query: 65 SGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARE 124
Q + C L+++ + + + S R+ + R
Sbjct: 48 DVQRGDERC--LRDYEGSNPFLRIIKDIVQTHASHSDDIRAEVA----------YLFNRN 95
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISIL 183
+ LS L ++ L+G+LG V GM+ F +++ + N V GI ++LI+ +
Sbjct: 96 FKTAINGLSILKMITVISPLLGLLGTVSGMLMVFDAVSAAAAQNPEVLARGIWQALITTV 155
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+GL V+IP+ + Y + F Q+E + + AI+
Sbjct: 156 MGLTVAIPTMVIYYFLSLRMRTF--QIEAIEHSYRAIV 191
>gi|213586368|ref|ZP_03368194.1| biopolymer transport protein ExbB [Salmonella enterica subsp.
enterica serovar Typhi str. E98-0664]
Length = 82
Score = 42.0 bits (97), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQL 62
D+S++ ++ + VKC++ L + S+++W++ KSV F T +R+ + EQL
Sbjct: 11 DLSVWGMYQHADIVVKCVMIGLILASVVTWAIFFSKSVEFFTQKRRLKR-EQL 62
>gi|217978803|ref|YP_002362950.1| tonB-system energizer ExbB [Methylocella silvestris BL2]
gi|217504179|gb|ACK51588.1| tonB-system energizer ExbB [Methylocella silvestris BL2]
Length = 142
Score = 42.0 bits (97), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLG 185
E+T++L+ + S++S +G+LG VLG+M F ++ S + I G+ +L + +G
Sbjct: 53 ELTKRLTIVASVASNAPYIGLLGTVLGVMLTFYNMNLEASTDASKIMVGLALALKATAVG 112
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQME 211
L V++ S AYN + +K +Q E
Sbjct: 113 LVVALVSVAAYNGLLRKTKVLLLQWE 138
>gi|297182746|gb|ADI18901.1| biopolymer transport proteins [uncultured delta proteobacterium
HF0010_08B07]
Length = 242
Score = 42.0 bits (97), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 50/88 (56%), Gaps = 1/88 (1%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI 172
++++M +ARE + L++ G++ + +G+ G V+G++ F+ + + I
Sbjct: 95 VEQIMLSTLARERQRYNRYLNYFGTIGNNTPFIGLFGTVIGIILAFKKLGENPKGGLEVI 154
Query: 173 -PGIIESLISILLGLCVSIPSSIAYNKF 199
P I E+L++ +GL V+IP+ + +N F
Sbjct: 155 GPLISEALVATAVGLFVAIPAVVIFNWF 182
>gi|223938219|ref|ZP_03630115.1| MotA/TolQ/ExbB proton channel [bacterium Ellin514]
gi|223893091|gb|EEF59556.1| MotA/TolQ/ExbB proton channel [bacterium Ellin514]
Length = 219
Score = 42.0 bits (97), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 52/106 (49%)
Query: 117 MDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII 176
+ +A ELE L+ + ++ + L+G+LG V G+M F SI + + GI
Sbjct: 95 LQLAAGIELERAGRFLTVMDTLVTLAPLLGLLGTVTGLMRAFLSIGDAELSVMAVTGGIG 154
Query: 177 ESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
E+LI+ GL ++I S I YN F + ++E A +++
Sbjct: 155 EALIATACGLGIAIISLIPYNYFNRKITRLQFELETAATNVEVMVN 200
>gi|283778757|ref|YP_003369512.1| MotA/TolQ/ExbB proton channel [Pirellula staleyi DSM 6068]
gi|283437210|gb|ADB15652.1| MotA/TolQ/ExbB proton channel [Pirellula staleyi DSM 6068]
Length = 300
Score = 42.0 bits (97), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 52/96 (54%), Gaps = 2/96 (2%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVS- 171
+++ M+ A A + + K+ +L + + +VG+LG V GM+ F+ +A N +
Sbjct: 163 VEKAMEDATAEQSARLFRKVEYLSVVGNIAPMVGLLGTVTGMLLAFKEVADSEGNAGAAQ 222
Query: 172 -IPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKF 206
GI ++L++ ++GL ++IPS A+ F +F
Sbjct: 223 LADGIYQALVTTVVGLIIAIPSLGAFAIFRNRVDQF 258
>gi|262375008|ref|ZP_06068242.1| TolQ [Acinetobacter lwoffii SH145]
gi|262310021|gb|EEY91150.1| TolQ [Acinetobacter lwoffii SH145]
Length = 207
Score = 42.0 bits (97), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 61/116 (52%), Gaps = 6/116 (5%)
Query: 105 SPIGIQDR---IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI 161
+P+G + R ++ + I+ E + +S LG+++S VG+ G V G+ ++
Sbjct: 62 APLGFEQRKAVAEQALLRQISAEKANAEKGVSVLGTIASISPFVGLFGTVWGIFHALVAV 121
Query: 162 --AGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFAN 215
+G V+ P + E+LI LGL V+IP+ +AYN + ++ A +++ A+
Sbjct: 122 GKSGQAGLAQVATP-VGEALIMTGLGLAVAIPAVLAYNICVRANRGLAHELQDQAH 176
>gi|82703417|ref|YP_412983.1| MotA/TolQ/ExbB proton channel [Nitrosospira multiformis ATCC 25196]
gi|82411482|gb|ABB75591.1| outer membrane transport energization protein ExbB [Nitrosospira
multiformis ATCC 25196]
Length = 215
Score = 42.0 bits (97), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISILLGLCVS 189
+L L ++ +A L+G++G V+GMM FQ I G N ++ G+ E+LI+ ++GL ++
Sbjct: 112 RLWVLETIVTAAPLLGLVGTVIGMMRAFQVIGGEGVVNPTAVTGGVAEALIATVVGLLIA 171
Query: 190 IPSSIAYNKF 199
+ + +N F
Sbjct: 172 LIALFGFNYF 181
>gi|291286884|ref|YP_003503700.1| MotA/TolQ/ExbB proton channel [Denitrovibrio acetiphilus DSM 12809]
gi|290884044|gb|ADD67744.1| MotA/TolQ/ExbB proton channel [Denitrovibrio acetiphilus DSM 12809]
Length = 447
Score = 42.0 bits (97), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 64/131 (48%), Gaps = 19/131 (14%)
Query: 80 HNIG----LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFL 135
NIG L +F + MS K + RS I ++ A+ E + LSFL
Sbjct: 306 KNIGTVTPLGRVFNAVMSSAGKP--RNVRSDI---------LEQALISESSVLERNLSFL 354
Query: 136 GSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISILLGLCVSIPSSI 194
++ ++G++G V GM+ F +I Y S++ + GI E+L + +LGL +IP +
Sbjct: 355 SVAAAVSPMLGLMGTVTGMISTFHAITVYGSSDPRMMAGGISEALTTTMLGLTAAIPIML 414
Query: 195 A---YNKFIED 202
A +N+ E+
Sbjct: 415 AVTIFNRRTEN 425
>gi|302325682|gb|ADL24883.1| MotA/TolQ/ExbB proton channel family protein [Fibrobacter
succinogenes subsp. succinogenes S85]
Length = 200
Score = 42.0 bits (97), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 61/114 (53%), Gaps = 14/114 (12%)
Query: 88 FMSAMSEWKKSCDKGARSPIGIQDRI---DRMMDVAIARELEEITEKLSFLGSMSSAGLL 144
F++ + +K + G P+ +++ + +DV++++ L+ I + +S L
Sbjct: 67 FLALVENVRKYRNDG---PVAVRNAMLATRHELDVSLSKSLKTIV-------TCASIAPL 116
Query: 145 VGILGAVLGMMGFFQSIAGY-YSNNVVSIPGIIESLISILLGLCVSIPSSIAYN 197
+G+LG V GM+ F++I + + N V+ GI E+L++ GL V+ P + YN
Sbjct: 117 LGLLGTVSGMVHTFETIKQFGFGNPVLLADGISEALLTTQAGLLVAFPLMLVYN 170
>gi|260888612|ref|ZP_05899875.1| MotA/TolQ/ExbB proton channel family domain protein [Selenomonas
sputigena ATCC 35185]
gi|330838098|ref|YP_004412678.1| MotA/TolQ/ExbB proton channel [Selenomonas sputigena ATCC 35185]
gi|260861645|gb|EEX76145.1| MotA/TolQ/ExbB proton channel family domain protein [Selenomonas
sputigena ATCC 35185]
gi|329745862|gb|AEB99218.1| MotA/TolQ/ExbB proton channel [Selenomonas sputigena ATCC 35185]
Length = 208
Score = 42.0 bits (97), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 47/91 (51%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
D + +D A A + E+L++L + + L+G+LG + GM+ F + +
Sbjct: 88 DDLTLALDTAYADMAMRLRERLNYLSMIVTMAPLLGLLGTISGMIESFSIFSVRAGEPLA 147
Query: 171 SIPGIIESLISILLGLCVSIPSSIAYNKFIE 201
GI E+LI+ GLCV+I S I + F++
Sbjct: 148 ITGGIGEALIATATGLCVAIFSLIVHTYFVQ 178
>gi|45656783|ref|YP_000869.1| biopolymer transport exbB-like protein [Leptospira interrogans
serovar Copenhageni str. Fiocruz L1-130]
gi|45600019|gb|AAS69506.1| biopolymer transport exbB-like protein [Leptospira interrogans
serovar Copenhageni str. Fiocruz L1-130]
Length = 270
Score = 42.0 bits (97), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 52/112 (46%), Gaps = 6/112 (5%)
Query: 121 IARELEEI----TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGI 175
+ RE E+ L L ++S+ L+G LG V GM+ F +IA N V GI
Sbjct: 157 VEREAAEVITVLERGLVILAAVSTIAPLIGFLGTVSGMINAFDAIANADQVNAKVVASGI 216
Query: 176 IESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANE-FSAILSRQTE 226
E+LI+ GL V+IP+ + F ++E AN + L R ++
Sbjct: 217 KEALITTAAGLIVAIPAMTFHQYLTSRIDGFTSEIEEAANRIYKEFLKRNSQ 268
>gi|294792560|ref|ZP_06757707.1| MotA/TolQ/ExbB proton channel family protein [Veillonella sp.
6_1_27]
gi|294456459|gb|EFG24822.1| MotA/TolQ/ExbB proton channel family protein [Veillonella sp.
6_1_27]
Length = 203
Score = 42.0 bits (97), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 54/121 (44%), Gaps = 5/121 (4%)
Query: 110 QDR--IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSN 167
DR + M+ +A + L +L ++ + L+G+LG V GM+G FQ +
Sbjct: 84 HDRNVLQSKMEDMVAHVYTHASRGLDWLSTIVTIAPLLGLLGTVTGMIGAFQVFGADGAV 143
Query: 168 NVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEG 227
G+ E+L++ GLCV+I + + F + M + + FS +L G
Sbjct: 144 PTAITGGVGEALVATASGLCVAIVALCFHAGFTHHVR---MTISRLEDSFSRVLDSYDRG 200
Query: 228 N 228
+
Sbjct: 201 H 201
>gi|332307698|ref|YP_004435549.1| MotA/TolQ/ExbB proton channel [Glaciecola agarilytica 4H-3-7+YE-5]
gi|332175027|gb|AEE24281.1| MotA/TolQ/ExbB proton channel [Glaciecola agarilytica 4H-3-7+YE-5]
Length = 467
Score = 42.0 bits (97), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Query: 120 AIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIES 178
AI E+ +++ L+ + +S L+G+LG V GM+ FQ+I + + + + GI +
Sbjct: 353 AILGEIPKLSRNLTIIKIISVVAPLMGLLGTVTGMINTFQAITLFGTGDPKLMAGGISTA 412
Query: 179 LISILLGLCVSIPSSIAY 196
L++ +LGL V+IP ++ Y
Sbjct: 413 LVTTVLGLVVAIPMTLLY 430
>gi|261414455|ref|YP_003248138.1| MotA/TolQ/ExbB proton channel [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|261370911|gb|ACX73656.1| MotA/TolQ/ExbB proton channel [Fibrobacter succinogenes subsp.
succinogenes S85]
Length = 210
Score = 42.0 bits (97), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 61/114 (53%), Gaps = 14/114 (12%)
Query: 88 FMSAMSEWKKSCDKGARSPIGIQDRI---DRMMDVAIARELEEITEKLSFLGSMSSAGLL 144
F++ + +K + G P+ +++ + +DV++++ L+ I + +S L
Sbjct: 77 FLALVENVRKYRNDG---PVAVRNAMLATRHELDVSLSKSLKTIV-------TCASIAPL 126
Query: 145 VGILGAVLGMMGFFQSIAGY-YSNNVVSIPGIIESLISILLGLCVSIPSSIAYN 197
+G+LG V GM+ F++I + + N V+ GI E+L++ GL V+ P + YN
Sbjct: 127 LGLLGTVSGMVHTFETIKQFGFGNPVLLADGISEALLTTQAGLLVAFPLMLVYN 180
>gi|237738480|ref|ZP_04568961.1| biopolymer transport exbB protein [Fusobacterium mortiferum ATCC
9817]
gi|229420360|gb|EEO35407.1| biopolymer transport exbB protein [Fusobacterium mortiferum ATCC
9817]
Length = 203
Score = 42.0 bits (97), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 145 VGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDS 203
VG+LG V GM+ FQ+++ Y + + V GI E+L + GL V+IP+ I YN F +
Sbjct: 124 VGLLGTVTGMIKAFQAVSIYGTGDASVLAKGISEALFTTAGGLFVAIPALIFYNYFNKKI 183
Query: 204 KKFAMQME 211
K ME
Sbjct: 184 DKIISDME 191
>gi|109897386|ref|YP_660641.1| MotA/TolQ/ExbB proton channel [Pseudoalteromonas atlantica T6c]
gi|109699667|gb|ABG39587.1| outer membrane transport energization protein ExbB
[Pseudoalteromonas atlantica T6c]
Length = 469
Score = 42.0 bits (97), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Query: 120 AIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIES 178
AI E+ +++ L+ + +S L+G+LG V GM+ FQ+I + + + + GI +
Sbjct: 355 AILGEIPKLSRNLTIIKIISVVAPLMGLLGTVTGMINTFQAITLFGTGDPKLMAGGISTA 414
Query: 179 LISILLGLCVSIPSSIAY 196
L++ +LGL V+IP ++ Y
Sbjct: 415 LVTTVLGLVVAIPMTLLY 432
>gi|154493588|ref|ZP_02032908.1| hypothetical protein PARMER_02928 [Parabacteroides merdae ATCC
43184]
gi|154086798|gb|EDN85843.1| hypothetical protein PARMER_02928 [Parabacteroides merdae ATCC
43184]
Length = 236
Score = 42.0 bits (97), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 79/171 (46%), Gaps = 18/171 (10%)
Query: 65 SGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDR----MMDVA 120
+G+ ET +K++ + G SA++ + + AR I+ I R M DV
Sbjct: 69 AGKEDETFMNRIKDYIHEGKVD---SALNLCRSTNTPSARM---IEKGITRLGRPMNDVL 122
Query: 121 IA------RELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-- 172
+A E+ ++ + + + ++ ++G LG V GM+ F +A +N V++
Sbjct: 123 VAIENVGNLEIAKLEKGFPLIATTAAGAPMLGFLGTVTGMVRAFFDMANAGTNVDVTLLS 182
Query: 173 PGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
GI E+L++ + GL V I + AYN + +ME EF +L+
Sbjct: 183 GGIYEALVTTVGGLVVGIITLFAYNYLVSQVDNVVNKMEARTMEFMDLLNE 233
>gi|153809132|ref|ZP_01961800.1| hypothetical protein BACCAC_03442 [Bacteroides caccae ATCC 43185]
gi|149128465|gb|EDM19684.1| hypothetical protein BACCAC_03442 [Bacteroides caccae ATCC 43185]
Length = 239
Score = 42.0 bits (97), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 56/106 (52%), Gaps = 3/106 (2%)
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSI--PGIIESLI 180
E+ ++ + L+ + ++S ++G LG V GM+ F +A S N+ +++ GI E++I
Sbjct: 133 EVAKLEKGLTVMATISGGAPMLGFLGTVTGMVRAFYEMANAGSGNIDITLLSGGIYEAMI 192
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+ + GL V I + AYN + + +ME EF +L+ +
Sbjct: 193 TTVGGLIVGIIAMFAYNYLVMLVDRVVNKMESRTMEFMDLLNEPAQ 238
>gi|294055798|ref|YP_003549456.1| MotA/TolQ/ExbB proton channel [Coraliomargarita akajimensis DSM
45221]
gi|293615131|gb|ADE55286.1| MotA/TolQ/ExbB proton channel [Coraliomargarita akajimensis DSM
45221]
Length = 194
Score = 42.0 bits (97), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI--PGIIESLISI 182
L ++ +L FL ++ +A L+G+LG V+GM+ F ++ V I GI E+LI+
Sbjct: 93 LHDVQRRLIFLNTLVAAAPLMGLLGTVIGMLATFAGLSSSGGAETVDIVAAGISEALITT 152
Query: 183 LLGLCVSIP 191
GL +++P
Sbjct: 153 QTGLFIALP 161
>gi|255690512|ref|ZP_05414187.1| MotA/TolQ/ExbB proton channel family protein [Bacteroides
finegoldii DSM 17565]
gi|260623964|gb|EEX46835.1| MotA/TolQ/ExbB proton channel family protein [Bacteroides
finegoldii DSM 17565]
Length = 239
Score = 42.0 bits (97), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 56/106 (52%), Gaps = 3/106 (2%)
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSI--PGIIESLI 180
E+ ++ + L+ + ++S ++G LG V GM+ F +A S N+ +++ GI E++I
Sbjct: 133 EVAKLEKGLTVMATISGGAPMLGFLGTVTGMVRAFYEMANAGSGNIDITLLSGGIYEAMI 192
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+ + GL V I + AYN + + +ME EF +L+ +
Sbjct: 193 TTVGGLIVGIIAMFAYNYLVMLVDRVVNKMESRTMEFMDLLNEPAQ 238
>gi|254446057|ref|ZP_05059533.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Verrucomicrobiae bacterium DG1235]
gi|198260365|gb|EDY84673.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Verrucomicrobiae bacterium DG1235]
Length = 196
Score = 42.0 bits (97), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 48/88 (54%), Gaps = 5/88 (5%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA---GYYS 166
+D ++R +V L I + + L A L G+LG V+GM+ F+ +A G +
Sbjct: 83 RDVLNRFSEVR-NEHLSRIDRRRTMLAVFVGAAPLTGLLGTVIGMLSTFKGLAISTGGQT 141
Query: 167 NNVVSIPGIIESLISILLGLCVSIPSSI 194
N+V+ GI E+LI+ LGL ++IP +
Sbjct: 142 VNMVA-DGISEALITTQLGLVIAIPGYV 168
>gi|83814527|ref|YP_445708.1| putative biopolymer transport protein [Salinibacter ruber DSM
13855]
gi|83755921|gb|ABC44034.1| putative biopolymer transport protein [Salinibacter ruber DSM
13855]
Length = 230
Score = 42.0 bits (97), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 50/97 (51%), Gaps = 2/97 (2%)
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI--PGIIESLISILL 184
++ ++ + L S++ ++G G V+GM+ FQ I N S+ GI E+LI+
Sbjct: 120 DLEKRTNLLASIAGIAPMLGFFGTVVGMIRAFQQIQNLQGNVNPSVLAGGIWEALITTAA 179
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
GL V I + +YN + ++ + ME A +F +L
Sbjct: 180 GLLVGILALFSYNYLMGRIRRLSNDMERSATDFIDLL 216
>gi|322379156|ref|ZP_08053552.1| Putative biopolymer transport protein exbB-like 2 [Helicobacter
suis HS1]
gi|322381052|ref|ZP_08055080.1| biopolymer transport protein [Helicobacter suis HS5]
gi|321146522|gb|EFX41394.1| biopolymer transport protein [Helicobacter suis HS5]
gi|321148419|gb|EFX42923.1| Putative biopolymer transport protein exbB-like 2 [Helicobacter
suis HS1]
Length = 161
Score = 42.0 bits (97), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 53/99 (53%), Gaps = 2/99 (2%)
Query: 115 RMMDVAIARELE-EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI- 172
R+ D R+LE ++ +L+ + ++ S VG+LG V G+M F + + + +I
Sbjct: 44 RVDDYKDKRKLELDLHRRLTLVATIGSNAPYVGLLGTVTGIMITFIELGNTSAVDTKAIM 103
Query: 173 PGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
G+ +L S +GL V+IPS + YN + S+ A + +
Sbjct: 104 VGLALALKSTGMGLIVAIPSVVIYNMLVRKSEIIATKWD 142
>gi|330976550|gb|EGH76599.1| biopolymer transport protein ExbB [Pseudomonas syringae pv. aptata
str. DSM 50252]
Length = 100
Score = 41.6 bits (96), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 147 ILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCVSIPSSIAYNKFIEDSKK 205
+ G V G+M QSI S ++ ++ G I +L++ +G+ V++P+ + YN F+ K
Sbjct: 1 MFGTVWGIMEALQSIGVTGSASLEAVAGPIGHALVATGVGIAVAVPAVLIYNFFLRRLKL 60
Query: 206 FAMQMEGFANEFSAILSR 223
M+ FA+ F A+ R
Sbjct: 61 AVADMDDFAHHFDALAQR 78
>gi|54302899|ref|YP_132892.1| putative biopolymer transport protein ExbB-related protein
[Photobacterium profundum SS9]
gi|46916323|emb|CAG23092.1| putative biopolymer transport protein ExbB-related protein
[Photobacterium profundum SS9]
Length = 454
Score = 41.6 bits (96), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 51/84 (60%), Gaps = 2/84 (2%)
Query: 115 RMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIP 173
R+++ AI E +E+ + LS L +++ ++G+LG V GM+ FQ I + + + V
Sbjct: 340 RLLE-AIVDEQQELEKGLSMLKLLAALAPMLGLLGTVTGMIETFQVITQFGNGDPKVMAG 398
Query: 174 GIIESLISILLGLCVSIPSSIAYN 197
GI +L++ +LGL ++P +A+N
Sbjct: 399 GISTALVTTVLGLISAMPLLLAHN 422
>gi|291613833|ref|YP_003523990.1| MotA/TolQ/ExbB proton channel [Sideroxydans lithotrophicus ES-1]
gi|291583945|gb|ADE11603.1| MotA/TolQ/ExbB proton channel [Sideroxydans lithotrophicus ES-1]
Length = 201
Score = 41.6 bits (96), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 43/82 (52%), Gaps = 4/82 (4%)
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFF--QSIAGYYSNNVVSIPGIIESLISILLGLCVS 189
L+ LG+++S L+G+ G V+GM+ F Q+ G + GI +L + GL V+
Sbjct: 107 LTTLGTIASISPLLGLFGTVIGMIEIFGSQNAGGAAPTELAH--GISVALYNTAYGLIVA 164
Query: 190 IPSSIAYNKFIEDSKKFAMQME 211
+PS IAY F ++ME
Sbjct: 165 VPSMIAYRHFRAQVDSLTIEME 186
>gi|332521394|ref|ZP_08397850.1| MotA/TolQ/ExbB proton channel [Lacinutrix algicola 5H-3-7-4]
gi|332043122|gb|EGI79320.1| MotA/TolQ/ExbB proton channel [Lacinutrix algicola 5H-3-7-4]
Length = 233
Score = 41.6 bits (96), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 62/117 (52%), Gaps = 2/117 (1%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGM-MGFFQSIAGYYSNNV 169
D I+ ++ A E+ + + +S L ++S A ++G LG V+GM + F+ S ++
Sbjct: 117 DDINTAIENAGRLEIYSLEKNISVLATISGAAPMIGFLGTVIGMILSIFEIANSGGSIDI 176
Query: 170 VSIP-GIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
++ G+ ++ + + GL V I + IAYN + + K +ME + EF +L+ +
Sbjct: 177 KTLADGLYTAMTTTVGGLIVGIIAYIAYNHLVVKTDKVVYKMEANSLEFLDLLNEPS 233
>gi|302339690|ref|YP_003804896.1| MotA/TolQ/ExbB proton channel [Spirochaeta smaragdinae DSM 11293]
gi|301636875|gb|ADK82302.1| MotA/TolQ/ExbB proton channel [Spirochaeta smaragdinae DSM 11293]
Length = 205
Score = 41.6 bits (96), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 49/96 (51%), Gaps = 2/96 (2%)
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLIS 181
E+ ++ L+ LG+++ L+G+LG V G + F + +G + + GI E+L++
Sbjct: 99 EIPQLERYLTSLGTIAHISPLLGLLGTVTGNIKAFGVLGSSGAVGDPSLLATGISEALLT 158
Query: 182 ILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEF 217
G+ VS+P+ YN + ++ME NE
Sbjct: 159 TAAGIVVSVPAITFYNYLVNRVNHMIIRMENRVNEL 194
>gi|19705139|ref|NP_602634.1| biopolymer transport exbB protein [Fusobacterium nucleatum subsp.
nucleatum ATCC 25586]
gi|19713074|gb|AAL93933.1| Biopolymer transport exbB protein [Fusobacterium nucleatum subsp.
nucleatum ATCC 25586]
Length = 187
Score = 41.6 bits (96), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 80/176 (45%), Gaps = 18/176 (10%)
Query: 27 IITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVC--KSLKNHHNIGL 84
II L + S+ +I +K+ NF L R QL G+ E + S K+ ++ L
Sbjct: 3 IIGLYAVLERFSYFLIKEKN-NFSKLPSDVR---QLINEGKIKEAIVALNSNKSSTSVVL 58
Query: 85 AAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLL 144
I + E K++ A G + I+R ++ + + L ++A L
Sbjct: 59 KEILIYGYKENKETLS--ALEEKGKEKAIER---------IKSLERNMWLLSLAANASPL 107
Query: 145 VGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKF 199
+G+LG V GM+ F SIA + + V GI E+L + GL V+IP I YN F
Sbjct: 108 LGLLGTVTGMIKAFNSIALNGTGDAGVLAKGISEALYTTAGGLIVAIPCMIFYNYF 163
>gi|87309304|ref|ZP_01091440.1| probable tolQ protein [Blastopirellula marina DSM 3645]
gi|87287943|gb|EAQ79841.1| probable tolQ protein [Blastopirellula marina DSM 3645]
Length = 278
Score = 41.6 bits (96), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 59/120 (49%), Gaps = 7/120 (5%)
Query: 107 IGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA--GY 164
+G ++ M +V E ++ +LS+L + S ++G+ G V GM+ F IA G
Sbjct: 157 LGYDKALEAMQEVG-EEENMKLDHRLSYLALIGSLSPMIGLFGTVDGMIRAFSVIALGGS 215
Query: 165 YSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQM----EGFANEFSAI 220
N GI +L++ L+GL ++IP+ +Y+ + A+++ EG + F +
Sbjct: 216 TPNPAQLAEGISTALMTTLVGLAIAIPAIASYSILRNRVDRLALEVGITSEGLMSRFQTV 275
>gi|332667284|ref|YP_004450072.1| MotA/TolQ/ExbB proton channel [Haliscomenobacter hydrossis DSM
1100]
gi|332336098|gb|AEE53199.1| MotA/TolQ/ExbB proton channel [Haliscomenobacter hydrossis DSM
1100]
Length = 231
Score = 41.6 bits (96), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 61/117 (52%), Gaps = 7/117 (5%)
Query: 115 RMMDVAIAR----ELEEITEKLSFLGSMSSAGLLVGILGAVLGM-MGFFQ-SIAGYYSNN 168
R +D AI E+ ++ + L+ L S++ A ++G LG V GM + F+Q S A + +
Sbjct: 115 RDIDAAIENVGNIEIFKLEKNLANLASIAGAAPMLGFLGTVTGMILAFYQMSTAESITPS 174
Query: 169 VVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+++ GI ++L++ GL V I + I YN + + K QME +F L T
Sbjct: 175 LLA-GGIYQALLTTAFGLGVGIFALIGYNLLVANIDKIIYQMEQSTVDFMDFLQEPT 230
>gi|329895889|ref|ZP_08271217.1| MotA/TolQ/ExbB proton channel family protein [gamma proteobacterium
IMCC3088]
gi|328922107|gb|EGG29466.1| MotA/TolQ/ExbB proton channel family protein [gamma proteobacterium
IMCC3088]
Length = 474
Score = 41.6 bits (96), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 51/89 (57%), Gaps = 1/89 (1%)
Query: 105 SPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGY 164
+P + ++ M + RE ++ L+ L +++ L+G+LG V GM+ FQ+I +
Sbjct: 351 NPTMDPETLELKMAEGVMRETPKLESGLTLLKIIAAVAPLMGLLGTVTGMIITFQAITIF 410
Query: 165 YSNNVVSIPGIIES-LISILLGLCVSIPS 192
+ + ++ G I S L++ +LGL V+IP+
Sbjct: 411 GAGDPKAMAGGISSALVTTVLGLLVAIPT 439
>gi|255264187|ref|ZP_05343529.1| MotA/TolQ/ExbB proton channel family domain protein [Thalassiobium
sp. R2A62]
gi|255106522|gb|EET49196.1| MotA/TolQ/ExbB proton channel family domain protein [Thalassiobium
sp. R2A62]
Length = 210
Score = 41.6 bits (96), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 77/183 (42%), Gaps = 25/183 (13%)
Query: 27 IITLLFIFSILSWSVIIQKSVNFITLR-RQFREFEQLF--WSGQSLETVCKSLKNHHNIG 83
++ +L SI+S +VI+ K F+ L R+ + W E +L N
Sbjct: 21 VVAILIALSIVSLAVILWKLWQFMALGVGHHRDITRAMTNWDHAQPEEAKHALIQSKNAM 80
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
AA+ + K + GA + L + L S++
Sbjct: 81 AAALVRGDDTTQKSRVEAGASA------------------HLTRLEGGFRILDSIAQIAP 122
Query: 144 LVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIE 201
L+G+ G VLGM+ FQ++ AG + + GI +L++ GL V++P+S+A F
Sbjct: 123 LLGLFGTVLGMIDAFQALQDAGNSVDPSLLAGGIWVALLTTAAGLAVAMPTSLALTYF-- 180
Query: 202 DSK 204
DS+
Sbjct: 181 DSR 183
>gi|330830957|ref|YP_004393909.1| TolQ proton channel protein [Aeromonas veronii B565]
gi|328806093|gb|AEB51292.1| TolQ proton channel protein [Aeromonas veronii B565]
Length = 457
Score = 41.6 bits (96), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 57/104 (54%), Gaps = 2/104 (1%)
Query: 109 IQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN 168
I+D ++ +D I R + + + +S + ++S L+G+LG V+GM+ FQ+I + + +
Sbjct: 334 IED-LESKLDEIILRNVPKFEKGISLIKLIASVAPLLGLLGTVVGMIATFQAITLFGTGD 392
Query: 169 V-VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
+ GI E+L++ + GL V++P Y S++ +E
Sbjct: 393 PKLMAGGISEALVTTMQGLVVAVPMLFLYTIVQTQSRRLIQVLE 436
>gi|53715250|ref|YP_101242.1| putative biopolymer transport protein ExbB [Bacteroides fragilis
YCH46]
gi|60683184|ref|YP_213328.1| putative transport related membrane protein [Bacteroides fragilis
NCTC 9343]
gi|253566382|ref|ZP_04843836.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
gi|265767080|ref|ZP_06094909.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
gi|52218115|dbj|BAD50708.1| putative biopolymer transport protein ExbB [Bacteroides fragilis
YCH46]
gi|60494618|emb|CAH09419.1| putative transport related membrane protein [Bacteroides fragilis
NCTC 9343]
gi|251945486|gb|EES85924.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
gi|263253457|gb|EEZ24933.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
gi|301164704|emb|CBW24263.1| putative transport related membrane protein [Bacteroides fragilis
638R]
Length = 240
Score = 41.6 bits (96), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 56/106 (52%), Gaps = 3/106 (2%)
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSI--PGIIESLI 180
E+ ++ + L+ + ++S ++G LG V GM+ F +A S N+ +++ GI E++I
Sbjct: 134 EVAKLEKGLTVMATISGGAPMLGFLGTVTGMVRAFYEMANAGSGNIDITLLSGGIYEAMI 193
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+ + GL V I + AYN + + +ME EF +L+ +
Sbjct: 194 TTVGGLIVGIIAMFAYNYLVMLVDRVVNKMESRTMEFMDLLNEPAQ 239
>gi|163781926|ref|ZP_02176926.1| tolQ protein [Hydrogenivirga sp. 128-5-R1-1]
gi|159883146|gb|EDP76650.1| tolQ protein [Hydrogenivirga sp. 128-5-R1-1]
Length = 141
Score = 41.6 bits (96), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Query: 123 RELE-EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGY-YSNNVVSIPGIIESLI 180
+ELE +T+ L + ++ + VG+LG VLG+M F S+ + + N + G+ +L
Sbjct: 46 QELEVRLTKGLHLIATVGANAPYVGLLGTVLGIMLTFYSVGSHGFVNTKEIMVGLALALK 105
Query: 181 SILLGLCVSIPSSIAYNKFIEDSK 204
+ +GL V+IPS I YN I K
Sbjct: 106 ATAVGLLVAIPSVIFYNLLIRRVK 129
>gi|108762277|ref|YP_632835.1| MotA/TolQ/ExbB proton channel family protein [Myxococcus xanthus DK
1622]
gi|108466157|gb|ABF91342.1| MotA/TolQ/ExbB proton channel family protein [Myxococcus xanthus DK
1622]
Length = 240
Score = 41.6 bits (96), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 63/133 (47%), Gaps = 16/133 (12%)
Query: 111 DRIDRM-------MDVAIARELEEITEKLS----FLGSMSSAGLLVGILGAVLGMMGFFQ 159
DR++R ++ A+ RE ++ KL L ++ S VG+ G V G+M F+
Sbjct: 84 DRMERSRTAGGAGIEAAVERERAQVALKLRRYLWILATIGSITPFVGLFGTVAGIMRSFK 143
Query: 160 SI-----AGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFA 214
+ AG + + GI E+L++ +G+ V++ + + YN F + +++
Sbjct: 144 DLGLDVEAGGTGGSSAVMTGISEALVATAVGILVAVQAMVFYNYFQARLSRVLVELRLIG 203
Query: 215 NEFSAILSRQTEG 227
+EF +L + G
Sbjct: 204 DEFVELLKERAAG 216
>gi|255011374|ref|ZP_05283500.1| putative transport related membrane protein [Bacteroides fragilis
3_1_12]
gi|313149189|ref|ZP_07811382.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
gi|313137956|gb|EFR55316.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
Length = 240
Score = 41.6 bits (96), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 56/106 (52%), Gaps = 3/106 (2%)
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSI--PGIIESLI 180
E+ ++ + L+ + ++S ++G LG V GM+ F +A S N+ +++ GI E++I
Sbjct: 134 EVAKLEKGLTVMATISGGAPMLGFLGTVTGMVRAFYEMANAGSGNIDITLLSGGIYEAMI 193
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+ + GL V I + AYN + + +ME EF +L+ +
Sbjct: 194 TTVGGLIVGIIAMFAYNYLVMLVDRVVNKMESRTMEFMDLLNEPAQ 239
>gi|254447971|ref|ZP_05061435.1| MotA/TolQ/ExbB proton channel [gamma proteobacterium HTCC5015]
gi|198262397|gb|EDY86678.1| MotA/TolQ/ExbB proton channel [gamma proteobacterium HTCC5015]
Length = 203
Score = 41.6 bits (96), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 55/107 (51%), Gaps = 4/107 (3%)
Query: 121 IARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESL 179
+A ELE L+ LG++++ L+G+LG V+GM+ F I + ++ GI ++L
Sbjct: 99 VAHELERF---LNALGTIAAITPLMGLLGTVIGMIQVFAVITSSGVGDPGALAGGISQAL 155
Query: 180 ISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
I+ G+ V+IPS I Y F + ME A + +L + E
Sbjct: 156 ITTAAGIGVAIPSMIFYRYFRARVDALIIGMEQEAIKLVEVLQGERE 202
>gi|145301146|ref|YP_001143987.1| TonB system biopolymer transport component [Aeromonas salmonicida
subsp. salmonicida A449]
gi|142853918|gb|ABO92239.1| TonB system biopolymer transport component [Aeromonas salmonicida
subsp. salmonicida A449]
Length = 431
Score = 41.6 bits (96), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 63/123 (51%), Gaps = 12/123 (9%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV- 169
+ ++ +D AI +E + + + +++ ++G+LG V GM+G FQ+I + + +
Sbjct: 308 ETLELRLDEAILQETPRMERGIGMVKVIAAIAPMLGLLGTVTGMIGTFQAITQFGTGDPK 367
Query: 170 VSIPGIIESLISILLGLCVSIPSSIAY----NKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+ GI +LI+ + GL +IP +A+ ++F E S Q+ G IL+ +
Sbjct: 368 IMAGGISMALITTVQGLVAAIPLILAHSLLQSRFTELSNVLEQQVAG-------ILAERA 420
Query: 226 EGN 228
E N
Sbjct: 421 ESN 423
>gi|295086525|emb|CBK68048.1| outer membrane transport energization protein ExbB (TC 2.C.1.1.1)
[Bacteroides xylanisolvens XB1A]
Length = 238
Score = 41.6 bits (96), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 56/106 (52%), Gaps = 3/106 (2%)
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSI--PGIIESLI 180
E+ ++ + L+ + ++S ++G LG V GM+ F +A S N+ +++ GI E++I
Sbjct: 133 EVAKLEKGLTVMATISGGAPMLGFLGTVTGMVRAFYEMANAGSGNIDITLLSGGIYEAMI 192
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+ + GL V I + AYN + + +ME EF +L+ +
Sbjct: 193 TTVGGLIVGIIAMFAYNYLVMLVDRVVNKMESRTMEFMDLLNEPAK 238
>gi|326565865|gb|EGE16027.1| motA/TolQ/ExbB proton channel [Moraxella catarrhalis BC1]
Length = 182
Score = 41.6 bits (96), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Query: 121 IARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESL 179
IA E+ + L LG+ +S +G+ G V G+ SI + + G + E+L
Sbjct: 79 IALHRYELEKGLPVLGTTASIAPFIGLFGTVWGIFHALHSIGATGQAGLAQVAGPVGEAL 138
Query: 180 ISILLGLCVSIPSSIAYN 197
I LGL V+IP+ I YN
Sbjct: 139 IMTGLGLAVAIPAVIFYN 156
>gi|227825115|ref|ZP_03989947.1| predicted protein [Acidaminococcus sp. D21]
gi|226905614|gb|EEH91532.1| predicted protein [Acidaminococcus sp. D21]
Length = 217
Score = 41.6 bits (96), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 50/104 (48%)
Query: 123 RELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISI 182
R +++ + L+ L + + ++G+LG V GMMG F + + + G+ E+LI+
Sbjct: 102 RAMDKFEKNLALLNIIITLAPVLGLLGTVTGMMGSFSKLVERGQDPMAVTAGLAEALITT 161
Query: 183 LLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+ GL +SI + F K + +E +N + ++ E
Sbjct: 162 VFGLVISIIAVCILGYFERRMKSITLSIEEMSNTLLEAVRKKCE 205
>gi|24215943|ref|NP_713424.1| biopolymer transport protein TolQ [Leptospira interrogans serovar
Lai str. 56601]
gi|24197157|gb|AAN50442.1| biopolymer transport protein TolQ [Leptospira interrogans serovar
Lai str. 56601]
Length = 270
Score = 41.6 bits (96), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 52/112 (46%), Gaps = 6/112 (5%)
Query: 121 IARELEEI----TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGI 175
+ RE E+ L L ++S+ L+G LG V GM+ F +IA N V GI
Sbjct: 157 VEREAAEVITVLERGLVILAAVSTIAPLIGFLGTVSGMINAFDAIANADQVNAKVVAGGI 216
Query: 176 IESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANE-FSAILSRQTE 226
E+LI+ GL V+IP+ + F ++E AN + L R ++
Sbjct: 217 KEALITTAAGLIVAIPAMTFHQYLTSRIDGFTSEIEEAANRIYKEFLKRNSQ 268
>gi|325983228|ref|YP_004295630.1| MotA/TolQ/ExbB proton channel [Nitrosomonas sp. AL212]
gi|325532747|gb|ADZ27468.1| MotA/TolQ/ExbB proton channel [Nitrosomonas sp. AL212]
Length = 216
Score = 41.6 bits (96), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISILL 184
E + +L L ++ +A L+G++G V+GMM FQ I N ++ G+ E+LI+ ++
Sbjct: 108 ESLARRLWALETIVTAAPLLGLVGTVIGMMRAFQVIGSEGLVNPTAVTGGVAEALIATVV 167
Query: 185 GLCVSIPSSIAYNKF 199
GL +++ + +N F
Sbjct: 168 GLAIALVALFGFNYF 182
>gi|21674404|ref|NP_662469.1| MotA/TolQ/ExbB proton channel family protein [Chlorobium tepidum
TLS]
gi|21647585|gb|AAM72811.1| MotA/TolQ/ExbB proton channel family protein [Chlorobium tepidum
TLS]
Length = 247
Score = 41.6 bits (96), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 65/138 (47%), Gaps = 7/138 (5%)
Query: 78 NHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRM---MDVAIARELEEITEKLSF 134
+ H L+A+ + + +K + RI M ++ A E+ + + L
Sbjct: 98 DDHQSSLSAVLRAVLDRYKMLAVHNVTDR---EKRISEMQKAVEEATLMEMPLLEKNLVA 154
Query: 135 LGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISILLGLCVSIPSS 193
+ +++S +VG+LG LGM+ F ++A + + V + GI E+L + LG+ I
Sbjct: 155 ISTIASISTMVGLLGTTLGMIRAFSAMATSGAPDAVQLSLGISEALFNTALGILGGIMGI 214
Query: 194 IAYNKFIEDSKKFAMQME 211
+ YN F +F+ Q++
Sbjct: 215 VTYNVFTSRVDRFSYQID 232
>gi|254491608|ref|ZP_05104787.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Methylophaga thiooxidans DMS010]
gi|224463086|gb|EEF79356.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Methylophaga thiooxydans DMS010]
Length = 451
Score = 41.6 bits (96), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 59/112 (52%), Gaps = 6/112 (5%)
Query: 117 MDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA--GYYSNNVVSIPG 174
+D AI RE + L L +++ ++G+LG V GM+ FQ+I G ++S G
Sbjct: 337 LDEAILRETPRLERGLITLAILAAIAPMLGLLGTVSGMIETFQAITLFGTGDPKLMS-GG 395
Query: 175 IIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
I ++L++ LGL V+IP + ++ S + ++ E +AI++R E
Sbjct: 396 ISQALVTTELGLAVAIPLLLIHSGLSSKSNRL---IQILDEESAAIVARNAE 444
>gi|326561377|gb|EGE11733.1| motA/TolQ/ExbB proton channel [Moraxella catarrhalis 46P47B1]
Length = 182
Score = 41.6 bits (96), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Query: 121 IARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESL 179
IA E+ + L LG+ +S +G+ G V G+ SI + + G + E+L
Sbjct: 79 IALHRYELEKGLPVLGTTASIAPFIGLFGTVWGIFHALHSIGATGQAGLAQVAGPVGEAL 138
Query: 180 ISILLGLCVSIPSSIAYN 197
I LGL V+IP+ I YN
Sbjct: 139 IMTGLGLAVAIPAVIFYN 156
>gi|296328306|ref|ZP_06870835.1| biopolymer transport ExbB protein [Fusobacterium nucleatum subsp.
nucleatum ATCC 23726]
gi|296154610|gb|EFG95398.1| biopolymer transport ExbB protein [Fusobacterium nucleatum subsp.
nucleatum ATCC 23726]
Length = 203
Score = 41.6 bits (96), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 80/176 (45%), Gaps = 18/176 (10%)
Query: 27 IITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVC--KSLKNHHNIGL 84
II L + S+ +I +K+ NF L R QL G+ E + S K+ ++ L
Sbjct: 19 IIGLYAVLERFSYFLIKEKN-NFSKLPSDVR---QLINEGKIKEAIVALNSNKSSTSVVL 74
Query: 85 AAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLL 144
I + E K++ A G + I+R ++ + + L ++A L
Sbjct: 75 KEILIYGYKENKETLS--ALEEKGKEKAIER---------IKSLERNMWLLSLAANASPL 123
Query: 145 VGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKF 199
+G+LG V GM+ F SIA + + V GI E+L + GL V+IP I YN F
Sbjct: 124 LGLLGTVTGMIKAFNSIALNGTGDAGVLAKGISEALYTTAGGLIVAIPCMIFYNYF 179
>gi|325110932|ref|YP_004272000.1| MotA/TolQ/ExbB proton channel [Planctomyces brasiliensis DSM 5305]
gi|324971200|gb|ADY61978.1| MotA/TolQ/ExbB proton channel [Planctomyces brasiliensis DSM 5305]
Length = 238
Score = 41.6 bits (96), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 112 RIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVS 171
++ + ++ A A + K+ +L + + ++G+LG V GM+ F S +V
Sbjct: 110 QVQKALEDASAEHSARMMRKVEYLNVIGTIAPMLGLLGTVWGMIQAFLEFESQASPSVSE 169
Query: 172 I-PGIIESLISILLGLCVSIPS 192
PGI +LI+ L+GL V+IP+
Sbjct: 170 FAPGISHALITTLMGLSVAIPA 191
>gi|89897848|ref|YP_514958.1| biopolymer transport proteins [Chlamydophila felis Fe/C-56]
gi|89331220|dbj|BAE80813.1| biopolymer transport proteins [Chlamydophila felis Fe/C-56]
Length = 232
Score = 41.6 bits (96), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 93/212 (43%), Gaps = 38/212 (17%)
Query: 25 KCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGL 84
K I L I S+ +W+V+ QK + ++++F + SG+SL+ +KN H
Sbjct: 21 KGIFFSLLILSLCTWTVLHQK----LAIQKKFLK------SGKSLKDFL--IKNRH---- 64
Query: 85 AAIFMSAMSEWKKSCD------KGA-------RSPIGIQDRIDRMMDV--------AIAR 123
A + + E D +GA R + M D+ AI
Sbjct: 65 APLSLEIHPELNPFADLYFTIKRGALELLDKNRQQAPDHGPVLSMEDIQSLETLLGAIMP 124
Query: 124 ELEEITEKLSFLGSMS-SAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISI 182
+ I + +F+ + + S +G+LG V G++ F I+ ++ + G+ +L +
Sbjct: 125 KYRAIMHENNFIPATTISLAPFLGLLGTVWGILVAFSHISTGHAGGTAMMEGLATALGTT 184
Query: 183 LLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFA 214
++GL V+IPS I +N S + +++E A
Sbjct: 185 IVGLFVAIPSLIGFNYLKAHSSRLILEIEQTA 216
>gi|294507601|ref|YP_003571659.1| biopolymer transport protein ExbB [Salinibacter ruber M8]
gi|294343929|emb|CBH24707.1| biopolymer transport protein ExbB [Salinibacter ruber M8]
Length = 245
Score = 41.6 bits (96), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 50/97 (51%), Gaps = 2/97 (2%)
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI--PGIIESLISILL 184
++ ++ + L S++ ++G G V+GM+ FQ I N S+ GI E+LI+
Sbjct: 135 DLEKRTNLLASIAGIAPMLGFFGTVVGMIRAFQQIQNLQGNVNPSVLAGGIWEALITTAA 194
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
GL V I + +YN + ++ + ME A +F +L
Sbjct: 195 GLLVGILALFSYNYLMGRIRRLSNDMERSATDFIDLL 231
>gi|160883175|ref|ZP_02064178.1| hypothetical protein BACOVA_01144 [Bacteroides ovatus ATCC 8483]
gi|260171936|ref|ZP_05758348.1| putative biopolymer transport protein [Bacteroides sp. D2]
gi|299148208|ref|ZP_07041270.1| MotA/TolQ/ExbB proton channel family protein [Bacteroides sp.
3_1_23]
gi|315920248|ref|ZP_07916488.1| conserved hypothetical protein [Bacteroides sp. D2]
gi|156111400|gb|EDO13145.1| hypothetical protein BACOVA_01144 [Bacteroides ovatus ATCC 8483]
gi|298512969|gb|EFI36856.1| MotA/TolQ/ExbB proton channel family protein [Bacteroides sp.
3_1_23]
gi|313694123|gb|EFS30958.1| conserved hypothetical protein [Bacteroides sp. D2]
Length = 238
Score = 41.6 bits (96), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 56/106 (52%), Gaps = 3/106 (2%)
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSI--PGIIESLI 180
E+ ++ + L+ + ++S ++G LG V GM+ F +A S N+ +++ GI E++I
Sbjct: 133 EVAKLEKGLTVMATISGGAPMLGFLGTVTGMVRAFYEMANAGSGNIDITLLSGGIYEAMI 192
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+ + GL V I + AYN + + +ME EF +L+ +
Sbjct: 193 TTVGGLIVGIIAMFAYNYLVMLVDRVVNKMESRTMEFMDLLNEPAK 238
>gi|300690600|ref|YP_003751595.1| biopolymer transport [Ralstonia solanacearum PSI07]
gi|299077660|emb|CBJ50296.1| biopolymer transport [Ralstonia solanacearum PSI07]
Length = 206
Score = 41.6 bits (96), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 52/105 (49%), Gaps = 4/105 (3%)
Query: 121 IARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLI 180
+A LE L+ LG+++S L+G+ G V+GM+ F S +N GI +L
Sbjct: 103 VAHRLER---YLNALGTIASVAPLMGLFGTVVGMIEIFGSQTAAGTNPQTLAHGISVALY 159
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGF-ANEFSAILSRQ 224
+ LGL V+IP+ I + F + +++E A AIL +
Sbjct: 160 NTALGLVVAIPTLIFWRYFRGVVDNYVVELEHLSATYLDAILPPR 204
>gi|237719136|ref|ZP_04549617.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
gi|293368685|ref|ZP_06615291.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Bacteroides ovatus SD CMC 3f]
gi|229451515|gb|EEO57306.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
gi|292636226|gb|EFF54712.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Bacteroides ovatus SD CMC 3f]
Length = 238
Score = 41.6 bits (96), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 56/106 (52%), Gaps = 3/106 (2%)
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSI--PGIIESLI 180
E+ ++ + L+ + ++S ++G LG V GM+ F +A S N+ +++ GI E++I
Sbjct: 133 EVAKLEKGLTVMATISGGAPMLGFLGTVTGMVRAFYEMANAGSGNIDITLLSGGIYEAMI 192
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+ + GL V I + AYN + + +ME EF +L+ +
Sbjct: 193 TTVGGLIVGIIAMFAYNYLVMLVDRVVNKMESRTMEFMDLLNEPAK 238
>gi|237714382|ref|ZP_04544863.1| conserved hypothetical protein [Bacteroides sp. D1]
gi|262408214|ref|ZP_06084761.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|294646283|ref|ZP_06723935.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Bacteroides ovatus SD CC 2a]
gi|294806770|ref|ZP_06765597.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Bacteroides xylanisolvens SD CC 1b]
gi|229445546|gb|EEO51337.1| conserved hypothetical protein [Bacteroides sp. D1]
gi|262353766|gb|EEZ02859.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|292638364|gb|EFF56730.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Bacteroides ovatus SD CC 2a]
gi|294446052|gb|EFG14692.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Bacteroides xylanisolvens SD CC 1b]
Length = 238
Score = 41.6 bits (96), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 56/106 (52%), Gaps = 3/106 (2%)
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSI--PGIIESLI 180
E+ ++ + L+ + ++S ++G LG V GM+ F +A S N+ +++ GI E++I
Sbjct: 133 EVAKLEKGLTVMATISGGAPMLGFLGTVTGMVRAFYEMANAGSGNIDITLLSGGIYEAMI 192
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+ + GL V I + AYN + + +ME EF +L+ +
Sbjct: 193 TTVGGLIVGIIAMFAYNYLVMLVDRVVNKMESRTMEFMDLLNEPAK 238
>gi|119503466|ref|ZP_01625549.1| TonB system biopolymer transport component [marine gamma
proteobacterium HTCC2080]
gi|119460528|gb|EAW41620.1| TonB system biopolymer transport component [marine gamma
proteobacterium HTCC2080]
Length = 473
Score = 41.6 bits (96), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 57/109 (52%), Gaps = 13/109 (11%)
Query: 97 KSCDKGARSPIGI-----QDRIDR-------MMDVAIARELEEITEKLSFLGSMSSAGLL 144
KS A +P+G +D+ D M + RE ++ L+ L +++ L
Sbjct: 329 KSNTANANNPLGRVLKIHEDKPDMDPETLELKMAEGVLRETPKLEAGLTLLKIIAAVAPL 388
Query: 145 VGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIES-LISILLGLCVSIPS 192
+G+LG V GM+ FQ+I + + + ++ G I S L++ +LGL V+IP+
Sbjct: 389 MGLLGTVTGMIITFQAITIFGAGDPKAMAGGISSALVTTVLGLLVAIPT 437
>gi|317487214|ref|ZP_07946013.1| MotA/TolQ/ExbB proton channel family protein [Bilophila wadsworthia
3_1_6]
gi|316921533|gb|EFV42820.1| MotA/TolQ/ExbB proton channel family protein [Bilophila wadsworthia
3_1_6]
Length = 252
Score = 41.6 bits (96), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 42/70 (60%), Gaps = 2/70 (2%)
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI--PGIIESLISI 182
LE + +LS L ++ L+G+LG +LGM+ F IA S +S+ GI ++L++
Sbjct: 89 LERLEARLSLLSVLARLAPLMGLLGTILGMITTFSRIAEARSGVDMSLLAGGIWQALLTT 148
Query: 183 LLGLCVSIPS 192
GLC++IP+
Sbjct: 149 AAGLCIAIPA 158
>gi|189426713|ref|YP_001953889.1| tonB-system energizer ExbB [Geobacter lovleyi SZ]
gi|189422972|gb|ACD97369.1| tonB-system energizer ExbB [Geobacter lovleyi SZ]
Length = 144
Score = 41.6 bits (96), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 50/92 (54%), Gaps = 4/92 (4%)
Query: 123 RELE-EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA--GYYSNNVVSIPGIIESL 179
+ELE +T KL + ++ S +G+LG VLG+M F ++ G+ + + G+ +L
Sbjct: 46 KELELALTRKLHIIATVGSNAPYIGLLGTVLGIMLTFSTMGQQGFVDATKI-MTGLALAL 104
Query: 180 ISILLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
+ +GL V+IP+ YN + +K+ + E
Sbjct: 105 KATAIGLVVAIPAVTIYNILVRQAKETLLAWE 136
>gi|294784540|ref|ZP_06749829.1| biopolymer transport ExbB protein [Fusobacterium sp. 3_1_27]
gi|294487756|gb|EFG35115.1| biopolymer transport ExbB protein [Fusobacterium sp. 3_1_27]
Length = 193
Score = 41.6 bits (96), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 81/176 (46%), Gaps = 18/176 (10%)
Query: 27 IITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVC--KSLKNHHNIGL 84
II L I S+ +I +++ NF L R QL G+ E + S K+ ++ L
Sbjct: 9 IIGLYAILERFSYFLIKERN-NFSRLPSDVR---QLINEGKIKEAIVALNSNKSSTSVVL 64
Query: 85 AAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLL 144
I + E K++ A G + I+R ++ + + L +++A L
Sbjct: 65 KEILIYGYKENKETLS--ALEEKGKEKAIER---------IKSLERNMWLLSLVANASPL 113
Query: 145 VGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKF 199
+G+LG V GM+ F SIA + + V GI E+L + GL V+IP I YN F
Sbjct: 114 LGLLGTVTGMIKAFNSIALNGTGDAGVLAKGISEALYTTAGGLIVAIPCMIFYNYF 169
>gi|301061889|ref|ZP_07202619.1| transporter, MotA/TolQ/ExbB proton channel family protein [delta
proteobacterium NaphS2]
gi|300443993|gb|EFK08028.1| transporter, MotA/TolQ/ExbB proton channel family protein [delta
proteobacterium NaphS2]
Length = 460
Score = 41.6 bits (96), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 62/132 (46%), Gaps = 13/132 (9%)
Query: 61 QLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVA 120
+L SG +E K+ H + + M+ + + S ++ I+ + A
Sbjct: 299 ELVGSG-DIEGAVKATYPHRDRPTGRVLMAGLRHREDS-----------REVIESSLSEA 346
Query: 121 IARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESL 179
+ RE + L L + ++ L+G+LG V GM+ FQ I + + + + GI E++
Sbjct: 347 MLREAPRLERFLGALKACAAVAPLLGLLGTVTGMINTFQVITTHGTGDPRLMAGGISEAM 406
Query: 180 ISILLGLCVSIP 191
++ +GL V+IP
Sbjct: 407 VTTQVGLAVAIP 418
>gi|215484732|ref|YP_002326967.1| Biopolymer transport exbB protein [Acinetobacter baumannii
AB307-0294]
gi|213988486|gb|ACJ58785.1| Biopolymer transport exbB protein [Acinetobacter baumannii
AB307-0294]
Length = 194
Score = 41.6 bits (96), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 83/196 (42%), Gaps = 35/196 (17%)
Query: 25 KCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGL 84
K + +L SI +W+V I + + L++Q + QL + SL+ + L +
Sbjct: 3 KTLYFILLAMSIATWTVFILRLMGTRQLKQQ--AYAQLSQAITSLKAKLQPLSFEQRKAV 60
Query: 85 A-AIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
A + +S K + DKG +S LG+++S
Sbjct: 61 AEQALLRQISAEKANADKG-----------------------------ISVLGTIASIAP 91
Query: 144 LVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIE 201
VG+ G V G+ ++ +G V+ P + E+LI LGL V+IP+ +AYN +
Sbjct: 92 FVGLFGTVWGIFHALVAVGKSGQAGLAQVATP-VGEALIMTGLGLAVAIPAVLAYNICVR 150
Query: 202 DSKKFAMQMEGFANEF 217
++ A ++ A+
Sbjct: 151 ANRGLAHDLQDQAHSL 166
>gi|119478441|ref|ZP_01618426.1| MotA/TolQ/ExbB proton channel family protein [marine gamma
proteobacterium HTCC2143]
gi|119448527|gb|EAW29774.1| MotA/TolQ/ExbB proton channel family protein [marine gamma
proteobacterium HTCC2143]
Length = 208
Score = 41.6 bits (96), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 50/89 (56%), Gaps = 1/89 (1%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
+D + + A + + ++ L+ LG++++ L+G+LG V+GM+ F +I + N
Sbjct: 85 RDVMKESIQEAASHVIHDLERYLNTLGTIAAISPLLGLLGTVIGMIKVFTAIMLQGTGNA 144
Query: 170 -VSIPGIIESLISILLGLCVSIPSSIAYN 197
V GI E+LI+ GL V+IP+ I +
Sbjct: 145 GVLAGGISEALITTATGLTVAIPALIMHR 173
>gi|207721748|ref|YP_002252187.1| biopolymer transport exbb-like protein [Ralstonia solanacearum
MolK2]
gi|206586912|emb|CAQ17497.1| biopolymer transport exbb-like protein [Ralstonia solanacearum
MolK2]
Length = 206
Score = 41.6 bits (96), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 52/105 (49%), Gaps = 4/105 (3%)
Query: 121 IARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLI 180
+A LE L+ LG+++S L+G+ G V+GM+ F S +N GI +L
Sbjct: 103 VAHRLERY---LNALGTIASVAPLMGLFGTVVGMIEIFGSQTAAGTNPQTLAHGISVALY 159
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGF-ANEFSAILSRQ 224
+ LGL V+IP+ I + F + +++E A AIL +
Sbjct: 160 NTALGLVVAIPTLIFWRYFRGVVDNYVVELEHLSATYLDAILPPR 204
>gi|116328961|ref|YP_798681.1| transport protein, TolQ-like [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
gi|116330431|ref|YP_800149.1| transport protein, TolQ-like [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
gi|116121705|gb|ABJ79748.1| Transport protein, TolQ-like [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
gi|116124120|gb|ABJ75391.1| Transport protein, TolQ-like [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
Length = 346
Score = 41.6 bits (96), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 55/109 (50%), Gaps = 12/109 (11%)
Query: 120 AIARELEEI----TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPG 174
+ RE EI L L ++S+ L+G LG V GM+ F +IA N V G
Sbjct: 160 GVEREAAEIITVLERGLVILAAVSTIAPLIGFLGTVSGMINAFDAIANADQVNAKVVAGG 219
Query: 175 IIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
I E+LI+ GL V+IP ++ +++++ +++GF +E +R
Sbjct: 220 IKEALITTAAGLIVAIP-AMTFHQYL------TSRIDGFTSEIEEAANR 261
>gi|34762908|ref|ZP_00143890.1| Biopolymer transport exbB protein [Fusobacterium nucleatum subsp.
vincentii ATCC 49256]
gi|237741249|ref|ZP_04571730.1| biopolymer transport exbB protein [Fusobacterium sp. 4_1_13]
gi|256846392|ref|ZP_05551849.1| biopolymer transport exbB protein [Fusobacterium sp. 3_1_36A2]
gi|27887435|gb|EAA24523.1| Biopolymer transport exbB protein [Fusobacterium nucleatum subsp.
vincentii ATCC 49256]
gi|229430781|gb|EEO40993.1| biopolymer transport exbB protein [Fusobacterium sp. 4_1_13]
gi|256718161|gb|EEU31717.1| biopolymer transport exbB protein [Fusobacterium sp. 3_1_36A2]
Length = 203
Score = 41.6 bits (96), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 81/176 (46%), Gaps = 18/176 (10%)
Query: 27 IITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVC--KSLKNHHNIGL 84
II L I S+ +I +++ NF L R QL G+ E + S K+ ++ L
Sbjct: 19 IIGLYAILERFSYFLIKERN-NFSRLPSDVR---QLINEGKIKEAIVALNSNKSSTSVVL 74
Query: 85 AAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLL 144
I + E K++ A G + I+R ++ + + L +++A L
Sbjct: 75 KEILIYGYKENKETLS--ALEEKGKEKAIER---------IKSLERNMWLLSLVANASPL 123
Query: 145 VGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKF 199
+G+LG V GM+ F SIA + + V GI E+L + GL V+IP I YN F
Sbjct: 124 LGLLGTVTGMIKAFNSIALNGTGDAGVLAKGISEALYTTAGGLIVAIPCMIFYNYF 179
>gi|83749962|ref|ZP_00946915.1| TolQ protein [Ralstonia solanacearum UW551]
gi|83723365|gb|EAP70590.1| TolQ protein [Ralstonia solanacearum UW551]
Length = 206
Score = 41.2 bits (95), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 52/105 (49%), Gaps = 4/105 (3%)
Query: 121 IARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLI 180
+A LE L+ LG+++S L+G+ G V+GM+ F S +N GI +L
Sbjct: 103 VAHRLERY---LNALGTIASVAPLMGLFGTVVGMIEIFGSQTAAGTNPQTLAHGISVALY 159
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGF-ANEFSAILSRQ 224
+ LGL V+IP+ I + F + +++E A AIL +
Sbjct: 160 NTALGLVVAIPTLIFWRYFRGVVDNYVVELEHLSATYLDAILPPR 204
>gi|300703205|ref|YP_003744807.1| biopolymer transport [Ralstonia solanacearum CFBP2957]
gi|299070868|emb|CBJ42170.1| biopolymer transport [Ralstonia solanacearum CFBP2957]
Length = 206
Score = 41.2 bits (95), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 51/103 (49%), Gaps = 4/103 (3%)
Query: 121 IARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLI 180
+A LE L+ LG+++S L+G+ G V+GM+ F S +N GI +L
Sbjct: 103 VAHRLERY---LNALGTIASVAPLMGLFGTVVGMIEIFGSQTAAGTNPQTLAHGISVALY 159
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGF-ANEFSAILS 222
+ LGL V+IP+ I + F + +++E A AIL
Sbjct: 160 NTALGLVVAIPTLIFWRYFRGVVDNYVVELEHLSATYLDAILP 202
>gi|78777200|ref|YP_393515.1| MotA/TolQ/ExbB proton channel [Sulfurimonas denitrificans DSM 1251]
gi|78497740|gb|ABB44280.1| MotA/TolQ/ExbB proton channel [Sulfurimonas denitrificans DSM 1251]
Length = 143
Score = 41.2 bits (95), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 65/140 (46%), Gaps = 27/140 (19%)
Query: 76 LKNHHNIGLAAI--FMSAMSEW--------KKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
LK + G+ AI FMS +S W KS D +M+ E+
Sbjct: 4 LKESVDYGILAILFFMSFVSIWLSIERYFFYKSVD---------------LMEYKTKNEV 48
Query: 126 EEI-TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYS-NNVVSIPGIIESLISIL 183
E I T LS + S++S VG+LG V+G+M F + S V + G+ +L +
Sbjct: 49 EVILTNNLSTISSIASNAPYVGLLGTVMGIMVVFYDMGQNSSLETSVVVIGLSLALKATA 108
Query: 184 LGLCVSIPSSIAYNKFIEDS 203
LGL V+IPS + Y+ F+ +
Sbjct: 109 LGLLVAIPSMMLYSAFLRKT 128
>gi|148264653|ref|YP_001231359.1| MotA/TolQ/ExbB proton channel [Geobacter uraniireducens Rf4]
gi|146398153|gb|ABQ26786.1| outer membrane transport energization protein ExbB [Geobacter
uraniireducens Rf4]
Length = 598
Score = 41.2 bits (95), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI 172
++ +D A E +++ + L S G G+LG V G+M F S+A ++ +I
Sbjct: 481 VEAALDRASTNETKKLNGWMMVLTLGISGGPFWGLLGTVWGVMNTFASLAESGEASLAAI 540
Query: 173 -PGIIESLISILLGLCVSIPSSIAY 196
PG+ +L L GL V+IP+ AY
Sbjct: 541 APGVASALACTLFGLLVAIPALFAY 565
>gi|284047704|ref|YP_003398043.1| MotA/TolQ/ExbB proton channel [Acidaminococcus fermentans DSM
20731]
gi|283951925|gb|ADB46728.1| MotA/TolQ/ExbB proton channel [Acidaminococcus fermentans DSM
20731]
Length = 212
Score = 41.2 bits (95), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 45/86 (52%)
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIP 191
L++L + + ++G+LG + GMM FQ++ + N + G+ E++I+ + GL ++I
Sbjct: 112 LNYLSVIVTLAPILGLLGTITGMMSSFQALGDRWDNPLGVTAGVAEAMITTVFGLLIAIG 171
Query: 192 SSIAYNKFIEDSKKFAMQMEGFANEF 217
+ + F + ++E N F
Sbjct: 172 TICFHTYFSQRVNTVLEEVEQMDNAF 197
>gi|83945424|ref|ZP_00957772.1| MotA/TolQ/ExbB proton channel family protein [Oceanicaulis
alexandrii HTCC2633]
gi|83851258|gb|EAP89115.1| MotA/TolQ/ExbB proton channel family protein [Oceanicaulis
alexandrii HTCC2633]
Length = 465
Score = 41.2 bits (95), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 59/115 (51%), Gaps = 13/115 (11%)
Query: 90 SAMSEWKKSCDKGARSPIG--------IQDR----IDRMMDVAIARELEEITEKLSFLGS 137
SA++ K+ +P+G ++DR I+ +D AI RE ++ L+F+
Sbjct: 314 SAINAQKRRSTASNSNPLGRIMLAYEEVKDRPTETIELKIDEAILRETPKLEFGLNFIKL 373
Query: 138 MSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIP 191
++ L+G+LG V GM+ F I + + + + GI E+L++ + GL +IP
Sbjct: 374 AAAVAPLLGLLGTVTGMIRTFTQITLFGTGDPRIMAGGISEALVTTVSGLIAAIP 428
>gi|269119207|ref|YP_003307384.1| MotA/TolQ/ExbB proton channel [Sebaldella termitidis ATCC 33386]
gi|268613085|gb|ACZ07453.1| MotA/TolQ/ExbB proton channel [Sebaldella termitidis ATCC 33386]
Length = 235
Score = 41.2 bits (95), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 51/85 (60%), Gaps = 6/85 (7%)
Query: 121 IARE--LEEIT--EK-LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYY-SNNVVSIPG 174
IA+E LE+IT EK + L +++ +G+LG V GM+ F+ ++G +++ + G
Sbjct: 100 IAKETTLEQITRLEKGMWLLNIVATVSPQLGLLGTVTGMIMAFKGLSGAGGADSTIIAAG 159
Query: 175 IIESLISILLGLCVSIPSSIAYNKF 199
I E+L + GL V IP+ IAYN F
Sbjct: 160 ISEALYTTAFGLIVGIPALIAYNFF 184
>gi|117617540|ref|YP_857924.1| hypothetical protein AHA_3435 [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
gi|117558947|gb|ABK35895.1| TolR [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
Length = 457
Score = 41.2 bits (95), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 57/104 (54%), Gaps = 2/104 (1%)
Query: 109 IQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN 168
I+D ++ +D I R + + + +S + ++S L+G+LG V+GM+ FQ+I + + +
Sbjct: 334 IED-LESKLDEIILRNVPKFEKGISIIKLIASVAPLLGLLGTVVGMIATFQAITLFGTGD 392
Query: 169 V-VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
+ GI E+L++ + GL V++P Y S++ +E
Sbjct: 393 PKLMAGGISEALVTTMQGLVVAVPMLFLYTIVQTQSRRLIQVLE 436
>gi|95929768|ref|ZP_01312509.1| MotA/TolQ/ExbB proton channel [Desulfuromonas acetoxidans DSM 684]
gi|95134064|gb|EAT15722.1| MotA/TolQ/ExbB proton channel [Desulfuromonas acetoxidans DSM 684]
Length = 473
Score = 41.2 bits (95), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 51/91 (56%), Gaps = 1/91 (1%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
Q+ +D ++ A+ +++ + L + ++ L+G+LG V GM+ FQ I + + +
Sbjct: 345 QEVLDNALEEALMKQMPRFEKFLPTMAMFAAIAPLLGLLGTVTGMISTFQVITVFGTGDP 404
Query: 170 VSIP-GIIESLISILLGLCVSIPSSIAYNKF 199
+ GI E+LI+ +GL V+IP + ++ F
Sbjct: 405 KMMSGGISEALITTQVGLAVAIPIMLLHHLF 435
>gi|218256899|ref|ZP_03474388.1| hypothetical protein PRABACTJOHN_00040 [Parabacteroides johnsonii
DSM 18315]
gi|218225897|gb|EEC98547.1| hypothetical protein PRABACTJOHN_00040 [Parabacteroides johnsonii
DSM 18315]
Length = 130
Score = 41.2 bits (95), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 59/122 (48%), Gaps = 9/122 (7%)
Query: 112 RIDRMM-DVAIA------RELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGY 164
R+ R M DV +A E+ ++ + + + ++ ++G LG V GM+ F +A
Sbjct: 7 RLGRPMNDVLVAIENVGNLEIAKLEKGFPLIATTAAGAPMLGFLGTVTGMVRAFFDMANA 66
Query: 165 YSNNVVSI--PGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
+N VS+ GI E+L++ + GL V I + AYN + +ME EF +L+
Sbjct: 67 GTNVDVSLLSGGIYEALVTTVGGLVVGIITLFAYNYLVSQVDNVVNKMEARTMEFMDLLN 126
Query: 223 RQ 224
Sbjct: 127 EP 128
>gi|182412067|ref|YP_001817133.1| MotA/TolQ/ExbB proton channel [Opitutus terrae PB90-1]
gi|177839281|gb|ACB73533.1| MotA/TolQ/ExbB proton channel [Opitutus terrae PB90-1]
Length = 218
Score = 41.2 bits (95), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 49/104 (47%)
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISIL 183
EL + ++ + +++ LVG+LG VLGM+ F Y+ V G+ ++L++
Sbjct: 103 ELPALERRVGAIAAIAQVAPLVGLLGTVLGMVTTFTGFQKDYATASVLAAGMWQALLATA 162
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEG 227
L ++IP+ +A++ + +E NE L + G
Sbjct: 163 ASLMLAIPAHLAHHFLTGRIRAIVRDVEWAGNEIMRYLLTEYRG 206
>gi|27366804|ref|NP_762331.1| MotA/TolQ/ExbB proton channel family protein [Vibrio vulnificus
CMCP6]
gi|27358371|gb|AAO07321.1| MotA/TolQ/ExbB proton channel family protein [Vibrio vulnificus
CMCP6]
Length = 455
Score = 41.2 bits (95), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 51/94 (54%), Gaps = 12/94 (12%)
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSI 190
LS L +++ ++G+LG V+GM+ FQ I + + + V GI +L++ +LGL ++
Sbjct: 346 LSMLKLLAALAPMLGLLGTVIGMIETFQVITQFGNGDPKVMASGISMALVTTVLGLVAAM 405
Query: 191 PSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
P +A+N + G+A E +IL +Q
Sbjct: 406 PLLLAHNV-----------LSGWAEEIRSILEKQ 428
>gi|257464098|ref|ZP_05628482.1| biopolymer transport exbB protein [Fusobacterium sp. D12]
gi|317061617|ref|ZP_07926102.1| biopolymer transport exbB protein [Fusobacterium sp. D12]
gi|313687293|gb|EFS24128.1| biopolymer transport exbB protein [Fusobacterium sp. D12]
Length = 202
Score = 41.2 bits (95), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 83/181 (45%), Gaps = 21/181 (11%)
Query: 27 IITLLFIFSILSWSVIIQKSVNFITLRRQF-----REFEQLFWSGQSLETV--CKSLKNH 79
I+ +LF SI + ++I+++ V F ++ + L G+ E + C+S K
Sbjct: 11 ILWVLFFMSIGALAIILERVVFFTRTEKKVDVDFKKNINDLISQGKVEEAIQLCESKKGS 70
Query: 80 HNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMS 139
+A + + KK D +QD + ++ + + + LS L ++
Sbjct: 71 ----VAGSIRTFLKRAKKGQD--------VQD-YESIIKEIMLESMTPLDRGLSSLEAIG 117
Query: 140 SAGLLVGILGAVLGMMGFFQSIAGYYSNN-VVSIPGIIESLISILLGLCVSIPSSIAYNK 198
S + G+LG V GM+ F +I+ + + + GI E+L++ GL V+IP AYN
Sbjct: 118 SLAPMCGLLGTVTGMIKAFINISKMGAGDPTIVADGISEALVTTAAGLYVAIPVIAAYNI 177
Query: 199 F 199
F
Sbjct: 178 F 178
>gi|196228022|ref|ZP_03126889.1| MotA/TolQ/ExbB proton channel [Chthoniobacter flavus Ellin428]
gi|196227425|gb|EDY21928.1| MotA/TolQ/ExbB proton channel [Chthoniobacter flavus Ellin428]
Length = 304
Score = 41.2 bits (95), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 51/96 (53%), Gaps = 1/96 (1%)
Query: 123 RELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLIS 181
RE + + S+L + ++G+LG V+GMMG F+ +AG ++ ++ G I E L++
Sbjct: 144 REATMLRTRNSYLSVIGVVSPMIGLLGTVIGMMGAFRVLAGSGISDPRALSGKIGEVLLA 203
Query: 182 ILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEF 217
GL ++IP+ ++Y F S+ + + N
Sbjct: 204 TASGLFIAIPAFVSYYVFRNISQMCIVHADDVVNSL 239
>gi|209573890|gb|ACI62883.1| TonB system transport protein ExbB2 [Acidithiobacillus thiooxidans]
Length = 225
Score = 41.2 bits (95), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/148 (21%), Positives = 68/148 (45%), Gaps = 3/148 (2%)
Query: 66 GQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQD--RIDRMMDVAIAR 123
G+ + + + L + L + SA ++ R P I+D ++ ++ A+ R
Sbjct: 45 GEKMASTLEQLPDIKEQSLRPLADSAEFPFRALLQIPIRFP-NIKDSAQLSEILQEAVMR 103
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISIL 183
++ + ++L L + + L+G+LG ++GM FQ + SN + E+L++
Sbjct: 104 QVPLLDKRLWLLDTTVTLAPLLGLLGTIIGMFHAFQILNNVASNPTAITGSVAEALMATA 163
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQME 211
GL ++I +++N + QME
Sbjct: 164 AGLVIAIIGLVSFNGLQNQMRFVVHQME 191
>gi|187919305|ref|YP_001888336.1| MotA/TolQ/ExbB proton channel [Burkholderia phytofirmans PsJN]
gi|187717743|gb|ACD18966.1| MotA/TolQ/ExbB proton channel [Burkholderia phytofirmans PsJN]
Length = 215
Score = 41.2 bits (95), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 56/98 (57%), Gaps = 2/98 (2%)
Query: 120 AIARELE-EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIE 177
++A ++E ++++ L ++ +A L+G+LG ++GMM FQ G + + G + +
Sbjct: 101 SVASQIERDMSKGFWVLETIVTAAPLLGLLGTIVGMMHSFQLFGGTGLVDPAGVTGGVAQ 160
Query: 178 SLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFAN 215
SL++ +GL V++ + A+N F ++ ++E FA
Sbjct: 161 SLVATAIGLVVALFALFAFNYFSRRLERLMDELESFAT 198
>gi|330831693|ref|YP_004394645.1| TonB system biopolymer transport component [Aeromonas veronii B565]
gi|328806829|gb|AEB52028.1| TonB system biopolymer transport component [Aeromonas veronii B565]
Length = 434
Score = 41.2 bits (95), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 60/117 (51%), Gaps = 12/117 (10%)
Query: 117 MDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGI 175
+D AI +E + + + +++ ++G+LG V GM+G FQ+I + + + + GI
Sbjct: 317 LDEAILQETPRMERGIGMVKVIAAIAPMLGLLGTVTGMIGTFQAITQFGTGDPKIMAGGI 376
Query: 176 IESLISILLGLCVSIPSSIAY----NKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
+L++ + GL +IP +A+ ++F E S Q+ G IL+ + E N
Sbjct: 377 SMALVTTVQGLVAAIPLILAHSLLQSRFTELSNVLEQQVAG-------ILAERAESN 426
>gi|298480233|ref|ZP_06998431.1| MotA/TolQ/ExbB proton channel family protein [Bacteroides sp. D22]
gi|298273514|gb|EFI15077.1| MotA/TolQ/ExbB proton channel family protein [Bacteroides sp. D22]
Length = 239
Score = 41.2 bits (95), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 55/104 (52%), Gaps = 3/104 (2%)
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSI--PGIIESLI 180
E+ ++ + L+ + ++S ++G LG V GM+ F +A S N+ +++ GI E++I
Sbjct: 133 EVAKLEKGLTVMATISGGAPMLGFLGTVTGMVRAFYEMANAGSGNIDITLLSGGIYEAMI 192
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+ + GL V I + AYN + + +ME EF +L+
Sbjct: 193 TTVGGLIVGIIAMFAYNYLVMLVDRVVNKMESRTMEFMDLLNEP 236
>gi|329122129|ref|ZP_08250737.1| MotA/TolQ/ExbB proton channel [Dialister micraerophilus DSM 19965]
gi|327466936|gb|EGF12452.1| MotA/TolQ/ExbB proton channel [Dialister micraerophilus DSM 19965]
Length = 202
Score = 41.2 bits (95), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/113 (21%), Positives = 58/113 (51%)
Query: 114 DRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP 173
+++++ A + ++ E +++L + + L+G+LG V+GM+G F ++
Sbjct: 90 EKIIEGAAIHAIGKLKEYITYLDVIVTLSPLMGLLGTVVGMIGSFNVLSVVSGQPFAVTS 149
Query: 174 GIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
G+ E+L+ +GL V+I + +AY K + +E + + ++ ++E
Sbjct: 150 GVAEALVCTAIGLGVAIMALLAYTYLTARVNKLILDIEKISTVYLTMIEGESE 202
>gi|17547247|ref|NP_520649.1| biopolymer transport EXBB-like transmembrane protein [Ralstonia
solanacearum GMI1000]
gi|17429549|emb|CAD16235.1| probable biopolymer transport exbb-like transmembrane protein
[Ralstonia solanacearum GMI1000]
Length = 206
Score = 41.2 bits (95), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 52/105 (49%), Gaps = 4/105 (3%)
Query: 121 IARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLI 180
+A LE L+ LG+++S L+G+ G V+GM+ F S +N GI +L
Sbjct: 103 VAHRLERY---LNALGTIASVAPLMGLFGTVVGMIEIFGSQTAAGTNPQTLAHGISVALY 159
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGF-ANEFSAILSRQ 224
+ LGL V+IP+ I + F + +++E A AIL +
Sbjct: 160 NTALGLVVAIPTLIFWRYFRGVVDSYVVELEHLSATYLDAILPPR 204
>gi|187735732|ref|YP_001877844.1| MotA/TolQ/ExbB proton channel [Akkermansia muciniphila ATCC
BAA-835]
gi|187425784|gb|ACD05063.1| MotA/TolQ/ExbB proton channel [Akkermansia muciniphila ATCC
BAA-835]
Length = 263
Score = 41.2 bits (95), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 61/127 (48%), Gaps = 4/127 (3%)
Query: 104 RSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA- 162
R+P + + + R+ ++ ++S+L + + ++G+LG V+GMM F IA
Sbjct: 106 RNPSAQFEEVREIASAEGGRQAGFLSRQISWLSDIGAVAPMLGLLGTVVGMMKTFFEIAN 165
Query: 163 GYYSNNVVSIP---GIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
G +S I G+ E+LI+ GL + IP+ +AY F K +E +
Sbjct: 166 GDFSGGKQRIDMAGGVAEALITTAGGLMLGIPAILAYVYFRSRVHKRVGDLEAAVTHSVS 225
Query: 220 ILSRQTE 226
+++ Q +
Sbjct: 226 VVATQLQ 232
>gi|114766614|ref|ZP_01445566.1| MotA/TolQ/ExbB proton channel family protein [Pelagibaca
bermudensis HTCC2601]
gi|114541154|gb|EAU44207.1| MotA/TolQ/ExbB proton channel family protein [Roseovarius sp.
HTCC2601]
Length = 222
Score = 41.2 bits (95), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 54/99 (54%), Gaps = 8/99 (8%)
Query: 134 FLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGLCVSIP 191
FL S++ L+G+ G VLGM+ FQ++ AG + + GI +L++ +GL V++P
Sbjct: 116 FLDSVAQLSPLMGLFGTVLGMISAFQALQDAGSQVDPSILAGGIWVALMTTAVGLAVAMP 175
Query: 192 SSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
+S+ + F + M+ E E A+ S Q+ N+S
Sbjct: 176 TSVVLSWF-----ETRMEAERVLAE-KALRSIQSPSNLS 208
>gi|225011426|ref|ZP_03701864.1| MotA/TolQ/ExbB proton channel [Flavobacteria bacterium MS024-2A]
gi|225003929|gb|EEG41901.1| MotA/TolQ/ExbB proton channel [Flavobacteria bacterium MS024-2A]
Length = 225
Score = 41.2 bits (95), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 54/102 (52%), Gaps = 2/102 (1%)
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGM-MGFFQ-SIAGYYSNNVVSIPGIIESLIS 181
E+ ++ + +S L ++S A ++G LG V+GM + F+ S AG + + G+ ++ +
Sbjct: 122 EVYQLEKNISILATISGAAPMLGFLGTVIGMILSIFEISNAGGNIDMQLLADGLYTAMTT 181
Query: 182 ILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
+ GL V I I YN + + K QME + EF +L+
Sbjct: 182 TVAGLIVGILGYITYNHLVVKTNKAVYQMEASSLEFLDLLNE 223
>gi|117621306|ref|YP_858668.1| TonB system biopolymer transport component [Aeromonas hydrophila
subsp. hydrophila ATCC 7966]
gi|117562713|gb|ABK39661.1| TonB system biopolymer transport component [Aeromonas hydrophila
subsp. hydrophila ATCC 7966]
Length = 435
Score = 41.2 bits (95), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 63/123 (51%), Gaps = 12/123 (9%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV- 169
+ ++ +D AI +E + + + +++ ++G+LG V GM+G FQ+I + + +
Sbjct: 312 ETLELRLDEAILQETPRMERGIGMVKVIAAIAPMLGLLGTVTGMIGTFQAITQFGTGDPK 371
Query: 170 VSIPGIIESLISILLGLCVSIPSSIAY----NKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+ GI +L++ + GL +IP +A+ ++F E S Q+ G IL+ +
Sbjct: 372 IMAGGISMALVTTVQGLVAAIPLILAHSLLQSRFTELSNVLEQQVAG-------ILAERA 424
Query: 226 EGN 228
E N
Sbjct: 425 ESN 427
>gi|302343723|ref|YP_003808252.1| MotA/TolQ/ExbB proton channel [Desulfarculus baarsii DSM 2075]
gi|301640336|gb|ADK85658.1| MotA/TolQ/ExbB proton channel [Desulfarculus baarsii DSM 2075]
Length = 462
Score = 41.2 bits (95), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 53/103 (51%), Gaps = 1/103 (0%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
Q+ I+ + AI RE + L L ++ L+G+LG V GM+ F I + + +
Sbjct: 345 QEVIESGLAEAILRETPRLERFLQVLKVLAGVSPLLGLLGTVTGMINTFNVITVHGTGDP 404
Query: 170 -VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
+ GI E+L++ GL V+IP IA + + +++ A ME
Sbjct: 405 RLMAGGISEALLTTEFGLIVAIPILIAASLLSQKAQRLAGDME 447
>gi|37676579|ref|NP_936975.1| biopolymer transport protein ExbB-related protein [Vibrio
vulnificus YJ016]
gi|37201122|dbj|BAC96945.1| biopolymer transport protein ExbB-related protein [Vibrio
vulnificus YJ016]
Length = 455
Score = 41.2 bits (95), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 70/141 (49%), Gaps = 24/141 (17%)
Query: 97 KSCDKGARSPIG----IQDR-IDRMMDVAIARELEEITEK-------LSFLGSMSSAGLL 144
K ++ +P+G + D+ R ++ R LE I ++ LS L +++ +
Sbjct: 299 KQPNQPGNNPLGRVLAVYDKDKPRSVEALELRLLETIVDEQTGLEKGLSMLKLLAALAPM 358
Query: 145 VGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDS 203
+G+LG V+GM+ FQ I + + + V GI +L++ +LGL ++P +A+N
Sbjct: 359 LGLLGTVIGMIETFQVITQFGNGDPKVMASGISMALVTTVLGLVAAMPLLLAHNV----- 413
Query: 204 KKFAMQMEGFANEFSAILSRQ 224
+ G+A E +IL +Q
Sbjct: 414 ------LSGWAEEIRSILEKQ 428
>gi|320158687|ref|YP_004191065.1| motA/TolQ/ExbB proton channel family protein [Vibrio vulnificus
MO6-24/O]
gi|319933999|gb|ADV88862.1| MotA/TolQ/ExbB proton channel family protein [Vibrio vulnificus
MO6-24/O]
Length = 455
Score = 41.2 bits (95), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 51/94 (54%), Gaps = 12/94 (12%)
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSI 190
LS L +++ ++G+LG V+GM+ FQ I + + + V GI +L++ +LGL ++
Sbjct: 346 LSMLKLLAALAPMLGLLGTVIGMIETFQVITQFGNGDPKVMASGISMALVTTVLGLVAAM 405
Query: 191 PSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
P +A+N + G+A E +IL +Q
Sbjct: 406 PLLLAHNV-----------LSGWAEEIRSILEKQ 428
>gi|268317077|ref|YP_003290796.1| MotA/TolQ/ExbB proton channel [Rhodothermus marinus DSM 4252]
gi|262334611|gb|ACY48408.1| MotA/TolQ/ExbB proton channel [Rhodothermus marinus DSM 4252]
Length = 238
Score = 41.2 bits (95), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 47/98 (47%), Gaps = 2/98 (2%)
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI--PGIIESLISILL 184
E+ +++ L S++ ++G LG V GM+ FQ I N S+ GI E+L++
Sbjct: 127 ELEKRMDILASIAGIAPMLGFLGTVTGMIEAFQQIQNLQGNVNPSVLAGGIWEALLTTAF 186
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
GL V I + +N + + ME A +F +L
Sbjct: 187 GLVVGILALFGHNFLLTRINRLVNDMERSATDFIDLLQ 224
>gi|171910746|ref|ZP_02926216.1| MotA/TolQ/ExbB proton channel family protein [Verrucomicrobium
spinosum DSM 4136]
Length = 212
Score = 41.2 bits (95), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 44/92 (47%), Gaps = 3/92 (3%)
Query: 127 EITEKLSFLGSMSS---AGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISIL 183
EI + FL +M + L+G+LG V G+MG F ++ G GI E+LI+
Sbjct: 106 EIRQAGRFLTAMDTIITLAPLLGLLGTVTGIMGSFSAVGGAELAVEKVTGGIGEALIATA 165
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFAN 215
GL ++I + I YN F +E AN
Sbjct: 166 FGLGIAIATLIPYNWFHSKVAGLQHDIETAAN 197
>gi|332830249|gb|EGK02877.1| hypothetical protein HMPREF9455_01127 [Dysgonomonas gadei ATCC
BAA-286]
Length = 273
Score = 41.2 bits (95), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 61/107 (57%), Gaps = 7/107 (6%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA--GYYSNNVV 170
I + ++ A EL + + LS + ++S+ G L+G+ G VLGM+ F ++A G + V+
Sbjct: 155 IQKEIEEATTLELPYLQQNLSVIATISTLGTLMGLFGTVLGMIKSFGAMAQEGAPDSTVL 214
Query: 171 SIPGIIESLISILLGLCVSIPSSIAYNKF---IEDSKKFAMQMEGFA 214
++ GI E+L++ +G+ + I+Y+ F +ED A+ GFA
Sbjct: 215 AL-GISEALMNTAMGIGTGACAIISYSYFSGKVEDMTN-AVDEVGFA 259
>gi|225851487|ref|YP_002731721.1| MotA/TolQ/ExbB proton channel family protein [Persephonella marina
EX-H1]
gi|225645187|gb|ACO03373.1| MotA/TolQ/ExbB proton channel family protein [Persephonella marina
EX-H1]
Length = 213
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 61/119 (51%), Gaps = 7/119 (5%)
Query: 101 KGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQ- 159
KG RS ++ + + A E+ ++ ++ +G++++ ++G LG V GM+ F+
Sbjct: 86 KGRRS----ENDLRLAAEEAARMEIPKLEGYVNAMGAIAAIAPILGFLGTVTGMIQVFEA 141
Query: 160 -SIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEF 217
S+ G + ++S GI ++LI+ GL ++IPS AY F Q+E A E
Sbjct: 142 LSLEGLSNPELLS-KGISQALITTAFGLSIAIPSLAAYWYFKSKVNFLVTQLESLAVEL 199
>gi|312131885|ref|YP_003999225.1| outer membrane transport energization protein exbb [Leadbetterella
byssophila DSM 17132]
gi|311908431|gb|ADQ18872.1| outer membrane transport energization protein ExbB [Leadbetterella
byssophila DSM 17132]
Length = 273
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 61/115 (53%), Gaps = 2/115 (1%)
Query: 87 IFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVG 146
+ +A+ ++++ + GA + + + ++ A + EL + + L+ L ++ S LV
Sbjct: 133 VIKTALDKYEQLQNDGALNKEQKLAALQKEVEEATSLELPMLEKNLAILSTLGSVSTLVA 192
Query: 147 ILGAVLGMM-GFFQSIAGYYSNNVVSI-PGIIESLISILLGLCVSIPSSIAYNKF 199
+LG VLGM+ FF G S + ++ GI E+LI+ LG+ S + I YN F
Sbjct: 193 LLGTVLGMIRSFFALGQGGGSPDAAALSKGIAEALINTGLGIGTSAIAIIVYNYF 247
>gi|34498803|ref|NP_903018.1| exbB-like biopolymer transport [Chromobacterium violaceum ATCC
12472]
gi|34104655|gb|AAQ61012.1| probable exbB-like biopolymer transport [Chromobacterium violaceum
ATCC 12472]
Length = 204
Score = 40.8 bits (94), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 49/94 (52%), Gaps = 3/94 (3%)
Query: 121 IARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLI 180
+A +LE + L+ LG++++ L+G+LG V+GM+ F S +N GI +L
Sbjct: 99 VAYQLERL---LTTLGTIAAMAPLLGLLGTVIGMIEIFGSQNASGANPQQLAHGISVALY 155
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFA 214
+ GL V+IPS + Y F ++ME A
Sbjct: 156 NTAFGLIVAIPSMMFYRYFRSKVDGLLVEMEAQA 189
>gi|171059234|ref|YP_001791583.1| MotA/TolQ/ExbB proton channel [Leptothrix cholodnii SP-6]
gi|170776679|gb|ACB34818.1| MotA/TolQ/ExbB proton channel [Leptothrix cholodnii SP-6]
Length = 192
Score = 40.8 bits (94), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 86/192 (44%), Gaps = 26/192 (13%)
Query: 31 LFIFSILSWSVIIQKSVNF----ITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIG--L 84
+ + SI + ++II++ N + + E L SG + V + L ++ +G L
Sbjct: 1 MILCSIAALALIIERLANLREVKVAPPKLLDEVLGLTRSGLPSDDVLRKLADNSVLGSVL 60
Query: 85 AAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLL 144
AA SA + + ++ + + A + ++ L+ LG+++SA L
Sbjct: 61 AAGIRSATPSRGTN-----------EAQLRKAFESAGRAAVHKLERYLNALGTIASAAPL 109
Query: 145 VGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILL-----GLCVSIPSSIAYNKF 199
+G+LG V+GM+ F G S S P ++ IS+ L GL ++IPS + Y F
Sbjct: 110 LGLLGTVVGMIEIF----GAQSPTSGSNPEMLAHGISVALYNTAFGLIIAIPSLMFYRYF 165
Query: 200 IEDSKKFAMQME 211
F + +E
Sbjct: 166 RGRVDAFVLDLE 177
>gi|262375375|ref|ZP_06068608.1| MotA/TolQ/ExbB proton channel family protein [Acinetobacter lwoffii
SH145]
gi|262309629|gb|EEY90759.1| MotA/TolQ/ExbB proton channel family protein [Acinetobacter lwoffii
SH145]
Length = 212
Score = 40.8 bits (94), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 68/115 (59%), Gaps = 1/115 (0%)
Query: 117 MDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI-AGYYSNNVVSIPGI 175
M+V ++E+ + + ++FLG++S+ L+G+LG VLG++ F I G S+ V+ +PGI
Sbjct: 91 MEVVASQEIGYLEKNINFLGTLSAVAPLLGLLGTVLGIIESFLMIDVGTGSDPVLMMPGI 150
Query: 176 IESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
++LI+ G+ ++IP+ A+ F +++ ++E A F A L + +I
Sbjct: 151 SKALITTAAGMLIAIPALFAHRYFQRLVQEYVAELEQQATLFHADLFYRNHADID 205
>gi|296121013|ref|YP_003628791.1| MotA/TolQ/ExbB proton channel [Planctomyces limnophilus DSM 3776]
gi|296013353|gb|ADG66592.1| MotA/TolQ/ExbB proton channel [Planctomyces limnophilus DSM 3776]
Length = 339
Score = 40.8 bits (94), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 50/102 (49%), Gaps = 2/102 (1%)
Query: 123 RELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVS--IPGIIESLI 180
R+ ++ + + L ++ L+G+LG V GM+ F +IA + GI +L+
Sbjct: 211 RQTSQLRKHIRVLNGAATVAPLIGLLGTVAGMIESFNTIAAKQAMGRTEDLAAGIGLALL 270
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
+ GL ++IP+ I Y F ++M+G A + ++S
Sbjct: 271 TTAAGLLIAIPALIMYMYFAGRVDSLIIEMDGLAQDLVDLIS 312
>gi|312881678|ref|ZP_07741456.1| MotA/TolQ/ExbB proton channel family protein [Vibrio caribbenthicus
ATCC BAA-2122]
gi|309370741|gb|EFP98215.1| MotA/TolQ/ExbB proton channel family protein [Vibrio caribbenthicus
ATCC BAA-2122]
Length = 450
Score = 40.8 bits (94), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 58/114 (50%), Gaps = 13/114 (11%)
Query: 97 KSCDKGARSPIG--------IQDRIDRMMDV----AIARELEEITEKLSFLGSMSSAGLL 144
K+ D +P+G +DR +++ A+ E E+ + LS L ++ +
Sbjct: 298 KTPDSPGNNPLGRVLSVYNKDKDRTVEALELRLLEAVVDEQSELEKGLSMLKLFAALAPM 357
Query: 145 VGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYN 197
+G+LG V GM+ FQ I + + + + GI +L++ +LGL ++P +A+N
Sbjct: 358 LGLLGTVTGMIETFQVITQFGNGDPKIMADGISMALVTTVLGLITAMPLLLAHN 411
>gi|255321186|ref|ZP_05362352.1| transporter, MotA/TolQ/ExbB proton channel family [Acinetobacter
radioresistens SK82]
gi|262380128|ref|ZP_06073283.1| TolQ [Acinetobacter radioresistens SH164]
gi|255301740|gb|EET80991.1| transporter, MotA/TolQ/ExbB proton channel family [Acinetobacter
radioresistens SK82]
gi|262298322|gb|EEY86236.1| TolQ [Acinetobacter radioresistens SH164]
Length = 208
Score = 40.8 bits (94), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 65/131 (49%), Gaps = 6/131 (4%)
Query: 105 SPIGIQDR---IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI 161
+P+G + R ++ + I+ E + ++ LG+++S VG+ G V G+ ++
Sbjct: 62 APLGFEQRKAVAEQALLRQISAEKASAEKGVAVLGTIASIAPFVGLFGTVWGIFHALVAV 121
Query: 162 --AGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
+G V+ P + E+LI LGL V+IP+ +AYN + ++ A ++ A+
Sbjct: 122 GKSGQAGLAQVATP-VGEALIMTGLGLAVAIPAVLAYNIAVRFNRGLAHDLQDQAHSLLI 180
Query: 220 ILSRQTEGNIS 230
Q + N+S
Sbjct: 181 DTMLQQDSNVS 191
>gi|68304967|gb|AAY89978.1| predicted biopolymer transport ExbB-like transmembrane protein
RSc2528 RS01053 [uncultured bacterium BAC13K9BAC]
Length = 208
Score = 40.8 bits (94), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 55/108 (50%), Gaps = 7/108 (6%)
Query: 110 QDRIDRMMDVAIAR----ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQ--SIAG 163
QD+ +R + ++R LE L L ++ L+G+LG V GM+ FQ +AG
Sbjct: 90 QDK-ERYLREEVSRLSQERLEYYDSNLDTLKVIAMVAPLLGLLGTVFGMIDAFQQMEMAG 148
Query: 164 YYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
N GI E+L++ +GL V+IP+ + + F ++K + +E
Sbjct: 149 NNINPSTLSGGIWEALLTTAVGLSVAIPTVLFESYFRATNEKLKINIE 196
>gi|42523823|ref|NP_969203.1| adventurous gliding motility protein R [Bdellovibrio bacteriovorus
HD100]
gi|39576030|emb|CAE80196.1| Adventurous gliding motility protein R [Bdellovibrio bacteriovorus
HD100]
Length = 244
Score = 40.8 bits (94), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 49/105 (46%), Gaps = 9/105 (8%)
Query: 107 IGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYS 166
+G ++ I MD + +E + + FL + L G+LG + GM+ F ++A
Sbjct: 103 LGGKEEIQGKMDEVLIQENAALDHRTGFLTMFGNVATLTGLLGTISGMISSFAAVAFANP 162
Query: 167 NNVVSI--PGIIESLISILLGLCVSIPSSIAY-------NKFIED 202
S+ GI E++ + GL +IP+ +AY N+ ED
Sbjct: 163 AEKASLLSAGISEAMNATAYGLITAIPALVAYAILQNRANRLAED 207
>gi|313891512|ref|ZP_07825125.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Dialister microaerophilus UPII 345-E]
gi|313120089|gb|EFR43268.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Dialister microaerophilus UPII 345-E]
Length = 202
Score = 40.8 bits (94), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/113 (21%), Positives = 57/113 (50%)
Query: 114 DRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP 173
+++++ A + ++ E +++L + + L+G+LG V+GM+G F ++
Sbjct: 90 EKIIESAAIHAIGKLKEYITYLDVIVTLSPLMGLLGTVVGMIGSFNVLSVVSGQPFAVTS 149
Query: 174 GIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
G+ E+L+ GL V+I + +AY K + +E + + ++ ++E
Sbjct: 150 GVAEALVCTATGLGVAIMALLAYTYLTARVNKLILDIEKISTVYLTMIEGESE 202
>gi|91776444|ref|YP_546200.1| MotA/TolQ/ExbB proton channel [Methylobacillus flagellatus KT]
gi|91710431|gb|ABE50359.1| MotA/TolQ/ExbB proton channel [Methylobacillus flagellatus KT]
Length = 204
Score = 40.8 bits (94), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 49/92 (53%), Gaps = 3/92 (3%)
Query: 120 AIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESL 179
A+A +LE+ L+ LG++++ L+G+LG V+GM+ F + + GI +L
Sbjct: 100 AVAHKLEKY---LTTLGTIATVAPLLGLLGTVIGMVELFGAFTATGHDVAQFARGISVAL 156
Query: 180 ISILLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
+ G+ V++P+ I Y F F ++ME
Sbjct: 157 YNTAGGIVVAVPAMIFYRHFRGKIDGFIVEME 188
>gi|162452591|ref|YP_001614958.1| biopolymer transport protein, putative [Sorangium cellulosum 'So ce
56']
gi|161163173|emb|CAN94478.1| biopolymer transport protein, putative [Sorangium cellulosum 'So ce
56']
Length = 255
Score = 40.8 bits (94), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 45/86 (52%), Gaps = 12/86 (13%)
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVS-----------IPGI 175
++ +L++LG++ + +G+ G V+G++G F ++ V + I
Sbjct: 109 KLERRLAYLGTLGNNAPFIGLFGTVIGVVGAFDALGQAAKTPVAQATSQAMAPQAVMSSI 168
Query: 176 IESLISILLGLCVSIPSSIAYNKFIE 201
E+L++ +GL V+IP ++A N F +
Sbjct: 169 AEALVATAVGLAVAIP-AVAANNFFQ 193
>gi|239996818|ref|ZP_04717342.1| putative Tol protein [Alteromonas macleodii ATCC 27126]
Length = 454
Score = 40.8 bits (94), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Query: 120 AIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIES 178
AI E+ ++ L+ + +S L+G+LG V GM+ FQ+I + + + + GI +
Sbjct: 348 AILGEVPKLGRNLTIIKIISVVAPLMGLLGTVTGMINTFQAITLFGTGDPKLMAGGISTA 407
Query: 179 LISILLGLCVSIPSSIAY 196
L++ +LGL V+IP ++ Y
Sbjct: 408 LVTTVLGLVVAIPMTLLY 425
>gi|325142887|gb|EGC65252.1| ExbB [Neisseria meningitidis 961-5945]
Length = 216
Score = 40.8 bits (94), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 33/196 (16%), Positives = 87/196 (44%), Gaps = 7/196 (3%)
Query: 27 IITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAA 86
+ L+ + SI++W +++ + + R+ ++ SL + ++ + L+
Sbjct: 17 VFVLMLLMSIVTWCLVVLRCIKLYRARKGNAAVKRHMRDTLSLNDAVEKVRAV-DAPLSK 75
Query: 87 IFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSF----LGSMSSAG 142
+ A+ ++ + + S + ++ + + I + +I + + L S+ +
Sbjct: 76 LAQEALQSYR-NYRRNEASELAQALPLNEYLVIQIRNSMAQIMRRFDYGMTALASIGATA 134
Query: 143 LLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCVSIPSSIAYNKFIE 201
+G+ G V G+ +I ++ ++ G I E+L++ GL V+IP+ +AYN
Sbjct: 135 PFIGLFGTVWGIYHALINIGQSGQMSIAAVAGPIGEALVATAAGLFVAIPAVLAYNFLNR 194
Query: 202 DSKKFAMQMEGFANEF 217
+K ++ A++
Sbjct: 195 GTKILTQDLDAMAHDL 210
>gi|332140184|ref|YP_004425922.1| putative Tol protein [Alteromonas macleodii str. 'Deep ecotype']
gi|327550206|gb|AEA96924.1| putative Tol protein [Alteromonas macleodii str. 'Deep ecotype']
Length = 454
Score = 40.8 bits (94), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Query: 120 AIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIES 178
AI E+ ++ L+ + +S L+G+LG V GM+ FQ+I + + + + GI +
Sbjct: 348 AILGEVPKLGRNLTIIKIISVVAPLMGLLGTVTGMINTFQAITLFGTGDPKLMAGGISTA 407
Query: 179 LISILLGLCVSIPSSIAY 196
L++ +LGL V+IP ++ Y
Sbjct: 408 LVTTVLGLVVAIPMTLLY 425
>gi|332994434|gb|AEF04489.1| putative Tol protein [Alteromonas sp. SN2]
Length = 455
Score = 40.8 bits (94), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Query: 120 AIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIES 178
AI E+ ++ L+ + +S L+G+LG V GM+ FQ+I + + + + GI +
Sbjct: 349 AILGEVPKLGRNLTIIKIISVVAPLMGLLGTVTGMINTFQAITLFGTGDPKLMAGGISTA 408
Query: 179 LISILLGLCVSIPSSIAY 196
L++ +LGL V+IP ++ Y
Sbjct: 409 LVTTVLGLVVAIPMTLLY 426
>gi|226951957|ref|ZP_03822421.1| biopolymer transport protein (ExbB) [Acinetobacter sp. ATCC 27244]
gi|294649219|ref|ZP_06726657.1| biopolymer transport protein [Acinetobacter haemolyticus ATCC
19194]
gi|226837295|gb|EEH69678.1| biopolymer transport protein (ExbB) [Acinetobacter sp. ATCC 27244]
gi|292824886|gb|EFF83651.1| biopolymer transport protein [Acinetobacter haemolyticus ATCC
19194]
Length = 206
Score = 40.8 bits (94), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 54/97 (55%), Gaps = 3/97 (3%)
Query: 121 IARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIES 178
I+ E + + +S LG+++S VG+ G V G+ ++ +G V+IP + E+
Sbjct: 81 ISAEKSQAEKGVSVLGTIASLAPFVGLFGTVWGIFHALVAVGKSGQAGLAQVAIP-VGEA 139
Query: 179 LISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFAN 215
LI LGL V+IP+ +AYN + ++ A +++ A+
Sbjct: 140 LIMTGLGLAVAIPAVLAYNICMRFNRGLAHELQDQAH 176
>gi|262280878|ref|ZP_06058661.1| MotA/TolQ/ExbB proton channel [Acinetobacter calcoaceticus RUH2202]
gi|262257778|gb|EEY76513.1| MotA/TolQ/ExbB proton channel [Acinetobacter calcoaceticus RUH2202]
Length = 206
Score = 40.8 bits (94), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 90/208 (43%), Gaps = 36/208 (17%)
Query: 14 FALFMQMGLAV-KCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
F+++ Q AV K + +L SI +W+V I + + L++Q + QL + SL+
Sbjct: 3 FSIYWQHADAVSKTLYFILLAMSIATWTVFILRLMGTRQLKQQ--AYTQLSQAITSLKAK 60
Query: 73 CKSLKNHHNIGLA-AIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEK 131
+ L +A + +S K + +KG
Sbjct: 61 LQPLSFEQRKAVAEQALLRQISAEKVNAEKG----------------------------- 91
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGLCVS 189
+S LG+++S VG+ G V G+ ++ +G V+ P + E+LI LGL V+
Sbjct: 92 ISVLGTIASIAPFVGLFGTVWGIFHALVAVGKSGQAGLAQVATP-VGEALIMTGLGLAVA 150
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFANEF 217
IP+ +AYN + ++ A ++ A+
Sbjct: 151 IPAVLAYNICVRANRGLAHDLQDQAHSL 178
>gi|299065873|emb|CBJ37052.1| biopolymer transport [Ralstonia solanacearum CMR15]
Length = 206
Score = 40.8 bits (94), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIP 191
L+ LG+++S L+G+ G V+GM+ F S +N GI +L + LGL V+IP
Sbjct: 111 LNALGTIASVAPLMGLFGTVIGMIEIFGSQTAAGTNPQALAHGISVALYNTALGLVVAIP 170
Query: 192 SSIAYNKFIEDSKKFAMQMEGF-ANEFSAILSRQ 224
+ I + F + +++E A AIL +
Sbjct: 171 TLIFWRYFRGVVDSYVVELEHLSATYLDAILPPR 204
>gi|59801726|ref|YP_208438.1| ExbB [Neisseria gonorrhoeae FA 1090]
gi|59718621|gb|AAW90026.1| transport protein [Neisseria gonorrhoeae FA 1090]
Length = 236
Score = 40.8 bits (94), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 34/205 (16%), Positives = 89/205 (43%), Gaps = 7/205 (3%)
Query: 27 IITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAA 86
+ L+ + S ++W +++ + + R+ ++ SL + ++ + L+
Sbjct: 33 VFVLMLLMSTVTWCLVVLRCIKLYRARKGNAAVKRHMRDTLSLNDAVEKVR-AVDAPLSK 91
Query: 87 IFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSF----LGSMSSAG 142
+ A+ ++ + + S + ++ + + I + +I + + L S+ +
Sbjct: 92 LAQEALQSYR-NYRRNEASELAQALPLNEYLVIQIRNSMAQIMRRFDYGMTALASIGATA 150
Query: 143 LLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCVSIPSSIAYNKFIE 201
+G+ G V G+ +I ++ ++ G I E+L++ GL V+IP+ +AYN
Sbjct: 151 PFIGLFGTVWGIYHALINIGQSGQMSIAAVAGPIGEALVATAAGLFVAIPAVLAYNFLNR 210
Query: 202 DSKKFAMQMEGFANEFSAILSRQTE 226
+K ++ A++ L Q +
Sbjct: 211 GTKILTQDLDAMAHDLHVRLLNQKD 235
>gi|189218266|ref|YP_001938908.1| MotA/TolQ/ExbB proton channel family protein [Methylacidiphilum
infernorum V4]
gi|189185124|gb|ACD82309.1| MotA/TolQ/ExbB proton channel family protein [Methylacidiphilum
infernorum V4]
Length = 278
Score = 40.8 bits (94), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 45/81 (55%), Gaps = 6/81 (7%)
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP----GIIESL 179
E+ + L L +++S L+G+LG V GM+ F +A ++ VS+ GI +L
Sbjct: 148 EIPRLEAHLPILSTIASISPLLGLLGTVNGMIEAF--LAMNRASGAVSVTDLASGIWMAL 205
Query: 180 ISILLGLCVSIPSSIAYNKFI 200
+S G+ V+IP+ IAYN I
Sbjct: 206 VSTAAGISVAIPTQIAYNFLI 226
>gi|34557775|ref|NP_907590.1| biopolymer transport EXBB protein [Wolinella succinogenes DSM 1740]
gi|34483492|emb|CAE10490.1| BIOPOLYMER TRANSPORT EXBB PROTEIN [Wolinella succinogenes]
Length = 142
Score = 40.8 bits (94), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 51/90 (56%), Gaps = 9/90 (10%)
Query: 112 RIDRMMDVAIARELE-EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI---AGYYSN 167
++DR DV +LE ++T+ L+ L + S +G+LG V+G+M F + AG +N
Sbjct: 38 KVDRYKDV---NQLENDLTQNLTILSIIGSNAPYIGLLGTVIGIMVTFYDMGSGAGIDTN 94
Query: 168 NVVSIPGIIESLISILLGLCVSIPSSIAYN 197
V + G+ +L + LGL V+IP+ I Y
Sbjct: 95 AV--LIGLSLALKATALGLLVAIPTLIVYT 122
>gi|297171897|gb|ADI22884.1| biopolymer transport proteins [uncultured Rhizobium sp.
HF0500_35F13]
Length = 285
Score = 40.8 bits (94), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 49/89 (55%), Gaps = 2/89 (2%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVS- 171
+++ M+ A + ++ ++ +L + + +VG+LG V+GM+ FQ +A +
Sbjct: 150 VEKAMEDATEEQSAQLFRRVEYLSVIGNIAPMVGLLGTVIGMIVAFQEVAATQGSAGAGD 209
Query: 172 -IPGIIESLISILLGLCVSIPSSIAYNKF 199
GI ++L++ + GL V+IPS A+ F
Sbjct: 210 LAAGIYQALVTTVGGLIVAIPSLGAFAVF 238
>gi|299771664|ref|YP_003733690.1| MotA/TolQ/ExbB proton channel [Acinetobacter sp. DR1]
gi|298701752|gb|ADI92317.1| MotA/TolQ/ExbB proton channel [Acinetobacter sp. DR1]
Length = 206
Score = 40.8 bits (94), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 90/208 (43%), Gaps = 36/208 (17%)
Query: 14 FALFMQMGLAV-KCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
F+++ Q AV K + +L SI +W+V I + + L++Q + QL + SL+
Sbjct: 3 FSIYWQHADAVSKTLYFILLAMSIATWTVFILRLMGTRQLKQQ--AYAQLSQAITSLKAK 60
Query: 73 CKSLKNHHNIGLA-AIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEK 131
+ L +A + +S K + +KG
Sbjct: 61 LQPLSFEQRKAVAEQALLRQISAEKVNAEKG----------------------------- 91
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGLCVS 189
+S LG+++S VG+ G V G+ ++ +G V+ P + E+LI LGL V+
Sbjct: 92 ISVLGTIASIAPFVGLFGTVWGIFHALVAVGKSGQAGLAQVATP-VGEALIMTGLGLAVA 150
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFANEF 217
IP+ +AYN + ++ A ++ A+
Sbjct: 151 IPAVLAYNICVRANRGLAHDLQDQAHSL 178
>gi|87308941|ref|ZP_01091079.1| probable TolQ-type transport protein [Blastopirellula marina DSM
3645]
gi|87288284|gb|EAQ80180.1| probable TolQ-type transport protein [Blastopirellula marina DSM
3645]
Length = 263
Score = 40.8 bits (94), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 44/78 (56%), Gaps = 8/78 (10%)
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-----IIESLIS 181
++ K+ LG + ++G+ G VLGM+ F +IA + + P I ++L++
Sbjct: 163 QLYRKIEVLGLIGQIAPMLGLTGTVLGMINAFNTIA---ATDGAPKPAELAEAIGQALVT 219
Query: 182 ILLGLCVSIPSSIAYNKF 199
LLGL V+IP+ +AY+ F
Sbjct: 220 TLLGLVVAIPAMVAYSFF 237
>gi|124267669|ref|YP_001021673.1| putative biopolymer transport exbB-like transmembrane protein
[Methylibium petroleiphilum PM1]
gi|124260444|gb|ABM95438.1| putative biopolymer transport exbB-like transmembrane protein
[Methylibium petroleiphilum PM1]
Length = 213
Score = 40.8 bits (94), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 47/92 (51%), Gaps = 5/92 (5%)
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-----GIIESL 179
+ + L+ LG+++SA L+G+ G V+GM+ F S A + V P GI +L
Sbjct: 104 VHRLERYLNTLGTIASAAPLLGLFGTVVGMIEIFGSQAPATTAGVGGNPEQLAHGISIAL 163
Query: 180 ISILLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
+ GL V+IPS + Y F ++ + +E
Sbjct: 164 YNTAFGLVVAIPSLMFYRYFRGRVDEYTIDLE 195
>gi|71906754|ref|YP_284341.1| MotA/TolQ/ExbB proton channel [Dechloromonas aromatica RCB]
gi|71846375|gb|AAZ45871.1| outer membrane transport energization protein ExbB [Dechloromonas
aromatica RCB]
Length = 247
Score = 40.8 bits (94), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/113 (22%), Positives = 52/113 (46%), Gaps = 1/113 (0%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
++++R + ++ + L+ L + + VG+ G V G+ +I +
Sbjct: 111 EQMERALRQQLSATQARMENGLTLLATTGATSPFVGLFGTVWGIYHALVAIGISGQAALE 170
Query: 171 SIPGII-ESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
I G + E+LI GL V++P+ AYN F ++ ++ FA++ A +
Sbjct: 171 KIAGPVGEALIMTAAGLAVALPAVFAYNAFTRANRVLLADLDAFAHDLHAFFT 223
>gi|237752065|ref|ZP_04582545.1| TonB system transporter ExbB [Helicobacter winghamensis ATCC
BAA-430]
gi|229376632|gb|EEO26723.1| TonB system transporter ExbB [Helicobacter winghamensis ATCC
BAA-430]
Length = 143
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISILL 184
+ ITE L+ L + S VG+LG V+G+M F + + +V SI G+ +L + L
Sbjct: 50 DAITENLTTLHIIYSNAPYVGLLGTVIGIMITFYDMGMSGNIDVKSIVVGLSLALKATAL 109
Query: 185 GLCVSIPSSIAYNKFIE 201
GL V+IPS +AYN I
Sbjct: 110 GLLVAIPSLMAYNALIR 126
>gi|330505169|ref|YP_004382038.1| MotA/TolQ/ExbB proton channel [Pseudomonas mendocina NK-01]
gi|328919455|gb|AEB60286.1| MotA/TolQ/ExbB proton channel [Pseudomonas mendocina NK-01]
Length = 449
Score = 40.4 bits (93), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 54/92 (58%), Gaps = 3/92 (3%)
Query: 102 GARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI 161
GA+ + + ++ +D AI +E + + L +++ L+G+LG V GM+ FQ+I
Sbjct: 321 GAKPQLADLETLELKLDEAILQETPPLEKGQGLLKLLAAVAPLLGLLGTVTGMIVTFQAI 380
Query: 162 --AGYYSNNVVSIPGIIESLISILLGLCVSIP 191
+G + +++ GI ++L++ +LGL V+IP
Sbjct: 381 TQSGGGDSRLMA-DGISQALVTTVLGLVVAIP 411
>gi|171909542|ref|ZP_02925012.1| MotA/TolQ/ExbB proton channel [Verrucomicrobium spinosum DSM 4136]
Length = 207
Score = 40.4 bits (93), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 48/94 (51%), Gaps = 10/94 (10%)
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVS-------IPGIIE 177
L + + L + + L+G+LGAV+G++ F + + + NVV GI E
Sbjct: 92 LHRLETGVPLLEVIVTVSPLLGLLGAVVGLVTVFST---FGTGNVVPDADTQQVAKGIAE 148
Query: 178 SLISILLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
+L S + GL V+IP+ IA+ F +++ME
Sbjct: 149 ALHSTIAGLLVAIPTVIAHGYFSRKLDAISVRME 182
>gi|119774392|ref|YP_927132.1| MotA/TolQ/ExbB proton channel family protein [Shewanella
amazonensis SB2B]
gi|119766892|gb|ABL99462.1| MotA/TolQ/ExbB proton channel family protein [Shewanella
amazonensis SB2B]
Length = 451
Score = 40.4 bits (93), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 71/151 (47%), Gaps = 12/151 (7%)
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
LF G +++ K++ N N L I + + K D + ++ +D AI
Sbjct: 296 LFVIGSKVKSQAKNVANPGNNALGRILK--VYQDNKDADV---------ETLELKLDEAI 344
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIE-SLI 180
+E I ++S + +++ ++G+LG V GM+ FQSI + + + + G I +L+
Sbjct: 345 LKETPAIETRISIIKVLAAIAPMMGLLGTVTGMIATFQSIQLFGTGDPKLMAGGISMALV 404
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
+ + GL ++P + + + SK +E
Sbjct: 405 TTVQGLVAALPLMLVHAIVVARSKTIVQTLE 435
>gi|254483608|ref|ZP_05096831.1| transporter, MotA/TolQ/ExbB proton channel family, putative [marine
gamma proteobacterium HTCC2148]
gi|214036117|gb|EEB76801.1| transporter, MotA/TolQ/ExbB proton channel family, putative [marine
gamma proteobacterium HTCC2148]
Length = 122
Score = 40.4 bits (93), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 57/112 (50%), Gaps = 12/112 (10%)
Query: 120 AIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIE-S 178
+ +E ++ L+ L +++ L+G+LG V GM+ FQ+I + + + ++ G I +
Sbjct: 13 GVLKETPKLESGLTLLKIIAAVAPLMGLLGTVTGMIITFQAITIFGAGDPKAMAGGISGA 72
Query: 179 LISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
LI+ +LGL V+IP+ + + + G A IL QT G I+
Sbjct: 73 LITTVLGLLVAIPTVLLHT-----------VVNGRAQRIIHILDEQTTGMIA 113
>gi|119475460|ref|ZP_01615813.1| MotA/TolQ/ExbB proton channel family protein [marine gamma
proteobacterium HTCC2143]
gi|119451663|gb|EAW32896.1| MotA/TolQ/ExbB proton channel family protein [marine gamma
proteobacterium HTCC2143]
Length = 464
Score = 40.4 bits (93), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 58/103 (56%), Gaps = 1/103 (0%)
Query: 104 RSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAG 163
+P + ++ + AI +E+ +I L+ L +++ L+G+LG V GM+ FQ+I
Sbjct: 339 ENPTMDTETLELKLSEAIMKEVPKIELGLNLLKIIAAVAPLMGLLGTVTGMIITFQAITI 398
Query: 164 YYSNNVVSIPGIIE-SLISILLGLCVSIPSSIAYNKFIEDSKK 205
+ + + ++ G I +L++ +LGL V+IP+ + + +KK
Sbjct: 399 FGAGDPKAMAGGISGALVTTVLGLLVAIPTVLLHTVTNGQAKK 441
>gi|194099155|ref|YP_002002240.1| ExbB [Neisseria gonorrhoeae NCCP11945]
gi|239999452|ref|ZP_04719376.1| ExbB [Neisseria gonorrhoeae 35/02]
gi|240014627|ref|ZP_04721540.1| ExbB [Neisseria gonorrhoeae DGI18]
gi|240017073|ref|ZP_04723613.1| ExbB [Neisseria gonorrhoeae FA6140]
gi|240081291|ref|ZP_04725834.1| ExbB [Neisseria gonorrhoeae FA19]
gi|240113499|ref|ZP_04727989.1| ExbB [Neisseria gonorrhoeae MS11]
gi|240116150|ref|ZP_04730212.1| ExbB [Neisseria gonorrhoeae PID18]
gi|240118433|ref|ZP_04732495.1| ExbB [Neisseria gonorrhoeae PID1]
gi|240121151|ref|ZP_04734113.1| ExbB [Neisseria gonorrhoeae PID24-1]
gi|240123977|ref|ZP_04736933.1| ExbB [Neisseria gonorrhoeae PID332]
gi|240126179|ref|ZP_04739065.1| ExbB [Neisseria gonorrhoeae SK-92-679]
gi|240128656|ref|ZP_04741317.1| ExbB [Neisseria gonorrhoeae SK-93-1035]
gi|254494167|ref|ZP_05107338.1| biopolymer transporter exbB [Neisseria gonorrhoeae 1291]
gi|260440039|ref|ZP_05793855.1| ExbB [Neisseria gonorrhoeae DGI2]
gi|268599567|ref|ZP_06133734.1| biopolymer transporter exbB [Neisseria gonorrhoeae MS11]
gi|268601815|ref|ZP_06135982.1| biopolymer transporter exbB [Neisseria gonorrhoeae PID18]
gi|268604147|ref|ZP_06138314.1| biopolymer transporter exbB [Neisseria gonorrhoeae PID1]
gi|268682605|ref|ZP_06149467.1| biopolymer transporter ExbB [Neisseria gonorrhoeae PID332]
gi|268684765|ref|ZP_06151627.1| biopolymer transporter exbB [Neisseria gonorrhoeae SK-92-679]
gi|268687045|ref|ZP_06153907.1| biopolymer transporter exbB [Neisseria gonorrhoeae SK-93-1035]
gi|3913608|sp|O06433|EXBB_NEIGO RecName: Full=Biopolymer transport protein exbB
gi|2098622|gb|AAC45287.1| ExbB [Neisseria gonorrhoeae]
gi|193934445|gb|ACF30269.1| ExbB [Neisseria gonorrhoeae NCCP11945]
gi|226513207|gb|EEH62552.1| biopolymer transporter exbB [Neisseria gonorrhoeae 1291]
gi|268583698|gb|EEZ48374.1| biopolymer transporter exbB [Neisseria gonorrhoeae MS11]
gi|268585946|gb|EEZ50622.1| biopolymer transporter exbB [Neisseria gonorrhoeae PID18]
gi|268588278|gb|EEZ52954.1| biopolymer transporter exbB [Neisseria gonorrhoeae PID1]
gi|268622889|gb|EEZ55289.1| biopolymer transporter ExbB [Neisseria gonorrhoeae PID332]
gi|268625049|gb|EEZ57449.1| biopolymer transporter exbB [Neisseria gonorrhoeae SK-92-679]
gi|268627329|gb|EEZ59729.1| biopolymer transporter exbB [Neisseria gonorrhoeae SK-93-1035]
gi|317164700|gb|ADV08241.1| ExbB [Neisseria gonorrhoeae TCDC-NG08107]
Length = 220
Score = 40.4 bits (93), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 34/205 (16%), Positives = 89/205 (43%), Gaps = 7/205 (3%)
Query: 27 IITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAA 86
+ L+ + S ++W +++ + + R+ ++ SL + ++ + L+
Sbjct: 17 VFVLMLLMSTVTWCLVVLRCIKLYRARKGNAAVKRHMRDTLSLNDAVEKVR-AVDAPLSK 75
Query: 87 IFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSF----LGSMSSAG 142
+ A+ ++ + + S + ++ + + I + +I + + L S+ +
Sbjct: 76 LAQEALQSYR-NYRRNEASELAQALPLNEYLVIQIRNSMAQIMRRFDYGMTALASIGATA 134
Query: 143 LLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCVSIPSSIAYNKFIE 201
+G+ G V G+ +I ++ ++ G I E+L++ GL V+IP+ +AYN
Sbjct: 135 PFIGLFGTVWGIYHALINIGQSGQMSIAAVAGPIGEALVATAAGLFVAIPAVLAYNFLNR 194
Query: 202 DSKKFAMQMEGFANEFSAILSRQTE 226
+K ++ A++ L Q +
Sbjct: 195 GTKILTQDLDAMAHDLHVRLLNQKD 219
>gi|317052178|ref|YP_004113294.1| MotA/TolQ/ExbB proton channel [Desulfurispirillum indicum S5]
gi|316947262|gb|ADU66738.1| MotA/TolQ/ExbB proton channel [Desulfurispirillum indicum S5]
Length = 207
Score = 40.4 bits (93), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 54/99 (54%), Gaps = 3/99 (3%)
Query: 123 RELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAG-YYSNNVVSIPGIIESLIS 181
R E + + +++L ++ L+G++G ++GM+ FQ IA + GI E++++
Sbjct: 97 RNFERVNKHVTYLRLIAVISPLLGLMGTMVGMVRVFQEIAASAVPQQDMLAAGIWEAILT 156
Query: 182 ILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAI 220
+LGL +++P+ + Y ++ K ++E + + A+
Sbjct: 157 TILGLGIAVPTLVFY--YVLSLKLKGFRIEAIEHSYRAV 193
>gi|149908164|ref|ZP_01896828.1| putative biopolymer transport proteinExbB-related protein
[Moritella sp. PE36]
gi|149808706|gb|EDM68639.1| putative biopolymer transport proteinExbB-related protein
[Moritella sp. PE36]
Length = 495
Score = 40.4 bits (93), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 50/84 (59%), Gaps = 2/84 (2%)
Query: 115 RMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIP 173
R+M+V I E + + + LS L +++ ++G+LG V GM+ FQ I + + + V
Sbjct: 367 RLMEVVI-DEQQGLEKGLSMLKLLAALAPMLGLLGTVTGMIETFQVITQFGNGDPKVMAG 425
Query: 174 GIIESLISILLGLCVSIPSSIAYN 197
GI +LI+ +LGL ++P +A+N
Sbjct: 426 GISMALITTVLGLVAAMPLLLAHN 449
>gi|221134889|ref|ZP_03561192.1| putative Tol protein [Glaciecola sp. HTCC2999]
Length = 454
Score = 40.4 bits (93), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Query: 120 AIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIES 178
AI E+ ++ L+ + +S L+G+LG V GM+ FQ+I + + + + GI +
Sbjct: 348 AILGEVPKLGRNLTIIKIISVVAPLMGLLGTVTGMINTFQAITLFGTGDPKLMAGGISTA 407
Query: 179 LISILLGLCVSIPSSIAY 196
L++ +LGL V+IP ++ Y
Sbjct: 408 LVTTVLGLVVAIPMTLLY 425
>gi|89092891|ref|ZP_01165843.1| MotA/TolQ/ExbB proton channel family protein [Oceanospirillum sp.
MED92]
gi|89082916|gb|EAR62136.1| MotA/TolQ/ExbB proton channel family protein [Oceanospirillum sp.
MED92]
Length = 206
Score = 40.4 bits (93), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 52/85 (61%), Gaps = 7/85 (8%)
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGLCVS 189
L+ LG++++ L+G+LG V+GM+ F I G + NV++ GI ++LI+ GL ++
Sbjct: 107 LNPLGTIAAITPLLGLLGTVIGMIDVFTEIMVQGTGNANVLA-GGISQALITTATGLTIA 165
Query: 190 IPSSIAYNKFIE---DSKKFAMQME 211
IP+ I +++F + DS M+ E
Sbjct: 166 IPALI-FHRFFQRRIDSLVVTMEQE 189
>gi|302337651|ref|YP_003802857.1| MotA/TolQ/ExbB proton channel [Spirochaeta smaragdinae DSM 11293]
gi|301634836|gb|ADK80263.1| MotA/TolQ/ExbB proton channel [Spirochaeta smaragdinae DSM 11293]
Length = 231
Score = 40.4 bits (93), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 12/89 (13%)
Query: 120 AIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP----GI 175
AI RE++ E LS +G+++ L+G+LG V G+M F I V I GI
Sbjct: 114 AIRREMDRGLEALSVIGNIAP---LMGLLGTVTGLMRAFHRIESL--GGTVDIAAFSGGI 168
Query: 176 IESLISILLGLCVSIPSSI---AYNKFIE 201
E++I+ +GL V+IP+ + + K +E
Sbjct: 169 WEAMITTAIGLIVAIPAVVFCRVFEKIVE 197
>gi|90415504|ref|ZP_01223438.1| MotA/TolQ/ExbB proton channel family protein [marine gamma
proteobacterium HTCC2207]
gi|90332827|gb|EAS47997.1| MotA/TolQ/ExbB proton channel family protein [marine gamma
proteobacterium HTCC2207]
Length = 456
Score = 40.4 bits (93), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 120 AIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIES 178
A+ +E I LS L ++ L+G+LG V GM+ FQ I + + + ++ GI ++
Sbjct: 350 AVLKERPAIESGLSLLKIIAMVAPLLGLLGTVTGMIITFQMITLFGAGDPKAMAGGISQA 409
Query: 179 LISILLGLCVSIPSSIAYN 197
LI+ +LGL V+IP+ + +
Sbjct: 410 LITTVLGLVVAIPTVLMHT 428
>gi|302343722|ref|YP_003808251.1| MotA/TolQ/ExbB proton channel [Desulfarculus baarsii DSM 2075]
gi|301640335|gb|ADK85657.1| MotA/TolQ/ExbB proton channel [Desulfarculus baarsii DSM 2075]
Length = 202
Score = 40.4 bits (93), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 116 MMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-G 174
+ DVA+ + + L + + + L+G+LG V GM+ FQ I + + N S+ G
Sbjct: 91 LWDVAVRHQRPRLRRYLDTILVLVAVAPLLGLLGTVTGMIETFQVICIFGTGNAQSMASG 150
Query: 175 IIESLISILLGLCVSIPSSIA 195
I E+LI+ GL V++P +A
Sbjct: 151 ISEALITTQTGLMVAVPGMLA 171
>gi|257454984|ref|ZP_05620232.1| MotA/TolQ/ExbB proton channel [Enhydrobacter aerosaccus SK60]
gi|257447694|gb|EEV22689.1| MotA/TolQ/ExbB proton channel [Enhydrobacter aerosaccus SK60]
Length = 221
Score = 40.4 bits (93), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 1/91 (1%)
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCV 188
+ L+ LG+ ++ +G+ G V G+ SIA + + G + E+LI LGL V
Sbjct: 90 QGLNILGTTAAIAPFIGLFGTVWGIFHALDSIAKSGQAGLGQVAGPVGEALIMTGLGLAV 149
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
+IP+ I YN + ++K Q A+ A
Sbjct: 150 AIPAVIMYNVIVRINRKAMHQANDTAHTLLA 180
>gi|332291240|ref|YP_004429849.1| MotA/TolQ/ExbB proton channel [Krokinobacter diaphorus 4H-3-7-5]
gi|332169326|gb|AEE18581.1| MotA/TolQ/ExbB proton channel [Krokinobacter diaphorus 4H-3-7-5]
Length = 234
Score = 40.4 bits (93), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 54/105 (51%), Gaps = 4/105 (3%)
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA---GYYSNNVVSIPGIIESLI 180
E+ ++ +S L +++ A ++G LG V+GM+ F ++A G ++ GI ++
Sbjct: 131 EVYKLERNVSVLATIAGAAPMIGFLGTVIGMVLAFHTLATSSGQAEMGTLA-EGIYTAMT 189
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+ + GL V I + + YN + + K ME A +F +L+ +
Sbjct: 190 TTVAGLIVGIIAYMGYNHLVVRTDKVVHSMEANAVDFLDLLNEPS 234
>gi|260549123|ref|ZP_05823344.1| biopolymer transporter [Acinetobacter sp. RUH2624]
gi|260407851|gb|EEX01323.1| biopolymer transporter [Acinetobacter sp. RUH2624]
Length = 206
Score = 40.4 bits (93), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 90/208 (43%), Gaps = 36/208 (17%)
Query: 14 FALFMQMGLAV-KCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
F+++ Q AV K + +L SI +W+V I + + L++Q + QL + SL+
Sbjct: 3 FSIYWQHADAVSKTLYFILLAMSIATWTVFILRLMGTRQLKQQ--AYAQLSKAISSLKAK 60
Query: 73 CKSLKNHHNIGLA-AIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEK 131
+ L +A + +S K + +KG
Sbjct: 61 LQPLSFEQRKAVAEQALLRQISAEKVNAEKG----------------------------- 91
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGLCVS 189
+S LG+++S VG+ G V G+ ++ +G V+ P + E+LI LGL V+
Sbjct: 92 ISVLGTIASIAPFVGLFGTVWGIFHALVAVGKSGQAGLAQVATP-VGEALIMTGLGLAVA 150
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFANEF 217
IP+ +AYN + ++ A ++ A+
Sbjct: 151 IPAVLAYNICVRANRGLAHDLQDQAHSL 178
>gi|261414456|ref|YP_003248139.1| MotA/TolQ/ExbB proton channel [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|261370912|gb|ACX73657.1| MotA/TolQ/ExbB proton channel [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|302328141|gb|ADL27342.1| MotA/TolQ/ExbB proton channel family protein [Fibrobacter
succinogenes subsp. succinogenes S85]
Length = 522
Score = 40.4 bits (93), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 75/158 (47%), Gaps = 11/158 (6%)
Query: 64 WSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIG--IQDRI--DRMMDV 119
+ G+ K+L N A SA E K RS +G +DR ++ ++V
Sbjct: 359 FGGRGARNAVKALANRDLRLATAESQSAHGEVGKVL----RSVLGKNFKDRASAEKSLEV 414
Query: 120 AIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIE-S 178
A E+ ++ LS++ +S L+G+LG V+GM+ F I + +++ + G I +
Sbjct: 415 LFAGEVPKLEMGLSWISVFASTAPLLGLLGTVMGMIELFNVITMHGTSDPKLLAGGISIA 474
Query: 179 LISILLGLCVSIPSSIAYNKF--IEDSKKFAMQMEGFA 214
L++ GL V+IP + + I DS + M+ G A
Sbjct: 475 LVTTEAGLIVAIPLQLLHTLLVNISDSVRTRMEKTGLA 512
>gi|86131527|ref|ZP_01050125.1| MotA/TolQ/ExbB proton channel family protein [Dokdonia donghaensis
MED134]
gi|85817972|gb|EAQ39140.1| MotA/TolQ/ExbB proton channel family protein [Dokdonia donghaensis
MED134]
Length = 234
Score = 40.4 bits (93), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 54/105 (51%), Gaps = 4/105 (3%)
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA---GYYSNNVVSIPGIIESLI 180
E+ ++ +S L +++ A ++G LG V+GM+ F ++A G ++ GI ++
Sbjct: 131 EVYKLERNVSVLATIAGAAPMIGFLGTVIGMVLAFHTLATSSGQAEMGTLA-EGIYTAMT 189
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+ + GL V I + + YN + + K ME A +F +L+ +
Sbjct: 190 TTVAGLIVGIIAYMGYNHLVVRTDKVVHSMEANAVDFLDLLNEPS 234
>gi|29840727|ref|NP_829833.1| MotA/TolQ/ExbB proton channel family protein [Chlamydophila caviae
GPIC]
gi|29835077|gb|AAP05711.1| MotA/TolQ/ExbB proton channel family protein [Chlamydophila caviae
GPIC]
Length = 232
Score = 40.4 bits (93), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 96/225 (42%), Gaps = 38/225 (16%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLET 71
I F + L K I L I S+ +W+V+ QK + ++++F + SG+SL+
Sbjct: 8 PIIQAFREADLFGKGIFFSLLILSLCTWTVLHQK----LAIQKKFLK------SGKSLKD 57
Query: 72 VCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDR-------------MMD 118
+KN H A + + E D G + +D+ M D
Sbjct: 58 FL--IKNRH----APLSLEIHPELNPFADLYFTIKRGTLELLDKNRQQAPDHGPVLSMED 111
Query: 119 V--------AIARELEEITEKLSFLGSMS-SAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
+ AI + I + +F+ + + S +G+LG V G++ F I+ +
Sbjct: 112 IQSLETLLGAIMPKYRAIMHENNFIPATTISLAPFLGLLGTVWGILVAFSHISSGEAGGT 171
Query: 170 VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFA 214
+ G+ +L + ++GL V+IPS I +N S + +++E A
Sbjct: 172 AMMEGLATALGTTIVGLFVAIPSLIGFNYLKAHSSRLILEIEQTA 216
>gi|330955940|gb|EGH56200.1| biopolymer transport protein ExbB [Pseudomonas syringae Cit 7]
Length = 96
Score = 40.4 bits (93), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 151 VLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQ 209
V G+M QSI S ++ ++ G I +L++ +G+ V++P+ + YN F+ K
Sbjct: 1 VWGIMEALQSIGVTGSASLEAVAGPIGHALVATGVGIAVAVPAVLIYNFFLRRLKLAVAD 60
Query: 210 MEGFANEFSAILSR 223
M+ FA++F A+ R
Sbjct: 61 MDDFAHDFDALAQR 74
>gi|146308885|ref|YP_001189350.1| MotA/TolQ/ExbB proton channel [Pseudomonas mendocina ymp]
gi|145577086|gb|ABP86618.1| outer membrane transport energization protein ExbB [Pseudomonas
mendocina ymp]
Length = 449
Score = 40.4 bits (93), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 54/92 (58%), Gaps = 3/92 (3%)
Query: 102 GARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI 161
GA+ + + ++ +D AI +E + + L +++ L+G+LG V GM+ FQ+I
Sbjct: 321 GAKPQLADLETLELKLDEAILQETPPLEKGQGLLKLLAAVAPLLGLLGTVTGMIVTFQAI 380
Query: 162 --AGYYSNNVVSIPGIIESLISILLGLCVSIP 191
+G + +++ GI ++L++ +LGL V+IP
Sbjct: 381 TQSGGGDSRLMA-DGISQALVTTVLGLVVAIP 411
>gi|268595270|ref|ZP_06129437.1| biopolymer transporter exbB [Neisseria gonorrhoeae 35/02]
gi|268597397|ref|ZP_06131564.1| biopolymer transporter exbB [Neisseria gonorrhoeae FA19]
gi|291043325|ref|ZP_06569048.1| biopolymer transporter exbB [Neisseria gonorrhoeae DGI2]
gi|293398636|ref|ZP_06642814.1| biopolymer transporter ExbB [Neisseria gonorrhoeae F62]
gi|268548659|gb|EEZ44077.1| biopolymer transporter exbB [Neisseria gonorrhoeae 35/02]
gi|268551185|gb|EEZ46204.1| biopolymer transporter exbB [Neisseria gonorrhoeae FA19]
gi|291012931|gb|EFE04914.1| biopolymer transporter exbB [Neisseria gonorrhoeae DGI2]
gi|291611107|gb|EFF40204.1| biopolymer transporter ExbB [Neisseria gonorrhoeae F62]
Length = 230
Score = 40.4 bits (93), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 34/205 (16%), Positives = 89/205 (43%), Gaps = 7/205 (3%)
Query: 27 IITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAA 86
+ L+ + S ++W +++ + + R+ ++ SL + ++ + L+
Sbjct: 27 VFVLMLLMSTVTWCLVVLRCIKLYRARKGNAAVKRHMRDTLSLNDAVEKVR-AVDAPLSK 85
Query: 87 IFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSF----LGSMSSAG 142
+ A+ ++ + + S + ++ + + I + +I + + L S+ +
Sbjct: 86 LAQEALQSYR-NYRRNEASELAQALPLNEYLVIQIRNSMAQIMRRFDYGMTALASIGATA 144
Query: 143 LLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCVSIPSSIAYNKFIE 201
+G+ G V G+ +I ++ ++ G I E+L++ GL V+IP+ +AYN
Sbjct: 145 PFIGLFGTVWGIYHALINIGQSGQMSIAAVAGPIGEALVATAAGLFVAIPAVLAYNFLNR 204
Query: 202 DSKKFAMQMEGFANEFSAILSRQTE 226
+K ++ A++ L Q +
Sbjct: 205 GTKILTQDLDAMAHDLHVRLLNQKD 229
>gi|227535977|ref|ZP_03966026.1| MotA/TolQ/ExbB proton channel [Sphingobacterium spiritivorum ATCC
33300]
gi|227244220|gb|EEI94235.1| MotA/TolQ/ExbB proton channel [Sphingobacterium spiritivorum ATCC
33300]
Length = 276
Score = 40.4 bits (93), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 89/192 (46%), Gaps = 14/192 (7%)
Query: 30 LLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFM 89
++++FSI ++I K+ + R+ + L G + + K ++ A +
Sbjct: 82 MVWVFSIERL-IVINKASGTGNVGNFVRKVQTLINGGNIDTAIAECDKQKGSV--ANVIK 138
Query: 90 SAMSEWKK-SCDKG---ARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLV 145
+ + ++K S + G +S + IQ I+ A E+ + + L+ + ++ S G L
Sbjct: 139 AGLLKYKDVSANPGLDSEKSALAIQKEIEETT----ALEMPMLEKNLNVIATLVSIGTLT 194
Query: 146 GILGAVLGMMGFFQSIA-GYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIE--D 202
G+LG V GM+ F ++A G ++ GI E+LI+ G+ S + + YN D
Sbjct: 195 GLLGTVTGMIKAFSALATGGAPDSAKLANGISEALINTATGIATSTFAIVMYNILTAKID 254
Query: 203 SKKFAMQMEGFA 214
+++ GF+
Sbjct: 255 KLTYSIDEAGFS 266
>gi|332883681|gb|EGK03961.1| hypothetical protein HMPREF9456_00989 [Dysgonomonas mossii DSM
22836]
Length = 273
Score = 40.4 bits (93), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 56/107 (52%), Gaps = 14/107 (13%)
Query: 109 IQDRIDRMMDVAIARELEEIT--------EKLSFLGSMSSAGLLVGILGAVLGMMGFFQS 160
I D+ + I +ELEE T + LS + ++S+ G L+G+ G VLGM+ F +
Sbjct: 143 IADKNNDEKAAMIQKELEEATTLELPYLQQNLSVIATISTLGTLMGLFGTVLGMIRSFGA 202
Query: 161 IA--GYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKF---IED 202
+ G + +++ GI E+L + +G+ S I+Y+ F +ED
Sbjct: 203 MGQEGAPDSTALAV-GISEALYNTAMGIGTGAASIISYSYFSGKVED 248
>gi|325105674|ref|YP_004275328.1| outer membrane transport energization protein ExbB [Pedobacter
saltans DSM 12145]
gi|324974522|gb|ADY53506.1| outer membrane transport energization protein ExbB [Pedobacter
saltans DSM 12145]
Length = 275
Score = 40.4 bits (93), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 60/105 (57%), Gaps = 3/105 (2%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI 172
I + ++ A A E+ + + L+ + ++ S G LVG+LG V+GM+ F ++A + + ++
Sbjct: 161 IQKDIEEATALEMPMLEQNLTVVSTLVSIGTLVGLLGTVVGMIKAFAALATAGAPDQAAL 220
Query: 173 P-GIIESLISILLGLCVSIPSSIAYNKFIE--DSKKFAMQMEGFA 214
GI E+LI+ G+ S + I+YN F DS +++ GF+
Sbjct: 221 ANGISEALINTATGIGTSTLAIISYNFFTSKIDSLTYSIDEAGFS 265
>gi|39933231|ref|NP_945507.1| MotA/TolQ/ExbB proton channel family protein [Rhodopseudomonas
palustris CGA009]
gi|39652856|emb|CAE25598.1| possible MotA/TolQ/ExbB proton channel family [Rhodopseudomonas
palustris CGA009]
Length = 212
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 90/208 (43%), Gaps = 23/208 (11%)
Query: 10 DISIF--ALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
DIS+ A+F Q G VK ++ LL SILSW I++ V F+ L R S
Sbjct: 3 DISLTPAAVFAQAGPVVKTVLVLLLAASILSWVWIVEAVVAFMRLSAALRR------SRD 56
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
E + + SE D+ A+ + D + R AR+L
Sbjct: 57 GDEATILATVSAAGAAARDALPRGTSE----ADRRAK----VVDTMTRA-----ARDLIL 103
Query: 128 ITEK-LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLG 185
E L L +SS VG+ G V G+M F IA ++ V PGI E+L + G
Sbjct: 104 KAEAGLPNLAIVSSVAPFVGLFGTVWGIMTSFAGIAEARDTSLAVVAPGIAEALAATAWG 163
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGF 213
L +IP+SI YN+ + A+ ++ F
Sbjct: 164 LAAAIPASIGYNRIGALFNRTAIALDDF 191
>gi|194335847|ref|YP_002017641.1| MotA/TolQ/ExbB proton channel [Pelodictyon phaeoclathratiforme
BU-1]
gi|194308324|gb|ACF43024.1| MotA/TolQ/ExbB proton channel [Pelodictyon phaeoclathratiforme
BU-1]
Length = 248
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 34/156 (21%), Positives = 72/156 (46%), Gaps = 3/156 (1%)
Query: 57 REFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRM 116
R +Q +G + + K + H LAA+ + + +KK +++
Sbjct: 79 RSLKQDIDNGSIDQAIAKC--DDHQSSLAAVLRTVLDRYKKLVQHNVTDREKKISEMEKA 136
Query: 117 MDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GI 175
++ A E+ + + L + +++S +VG+LG LGM+ F ++A + + V + GI
Sbjct: 137 VEEATIMEMPLLEKNLVAISTIASISTMVGLLGTTLGMIRAFAAMATSGAPDAVQLSLGI 196
Query: 176 IESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
E+L + +G+ I + YN F +F+ ++
Sbjct: 197 SEALFNTAIGILGGIMGIVTYNVFTSRVDRFSYMID 232
>gi|300771684|ref|ZP_07081559.1| biopolymer transporter [Sphingobacterium spiritivorum ATCC 33861]
gi|300761673|gb|EFK58494.1| biopolymer transporter [Sphingobacterium spiritivorum ATCC 33861]
Length = 276
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 89/192 (46%), Gaps = 14/192 (7%)
Query: 30 LLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFM 89
++++FSI ++I K+ + R+ + L G + + K ++ A +
Sbjct: 82 MVWVFSIERL-IVINKASGTGNVGNFVRKVQTLINGGNIDTAIAECDKQKGSV--ANVIK 138
Query: 90 SAMSEWKK-SCDKG---ARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLV 145
+ + ++K S + G +S + IQ I+ A E+ + + L+ + ++ S G L
Sbjct: 139 AGLLKYKDVSANPGLDSEKSALAIQKEIEETT----ALEMPMLEKNLNVIATLVSIGTLT 194
Query: 146 GILGAVLGMMGFFQSIA-GYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIE--D 202
G+LG V GM+ F ++A G ++ GI E+LI+ G+ S + + YN D
Sbjct: 195 GLLGTVTGMIKAFSALATGGAPDSAKLANGISEALINTATGIATSTFAIVMYNILTAKID 254
Query: 203 SKKFAMQMEGFA 214
+++ GF+
Sbjct: 255 KLTYSIDEAGFS 266
>gi|269793120|ref|YP_003318024.1| MotA/TolQ/ExbB proton channel [Thermanaerovibrio acidaminovorans
DSM 6589]
gi|269100755|gb|ACZ19742.1| MotA/TolQ/ExbB proton channel [Thermanaerovibrio acidaminovorans
DSM 6589]
Length = 206
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 45/76 (59%)
Query: 118 DVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIE 177
++AI EL +++ LS + + ++G+LG VLGM+ F +I +++ GI +
Sbjct: 94 EIAIREELFLLSKGLSTIEWAARIAPMLGLLGTVLGMVDMFGAIGTAGASSGAVALGIRK 153
Query: 178 SLISILLGLCVSIPSS 193
+L + + GLC +IP+S
Sbjct: 154 ALYTTVAGLCCAIPAS 169
>gi|303256701|ref|ZP_07342715.1| MotA/TolQ/ExbB proton channel family protein [Burkholderiales
bacterium 1_1_47]
gi|302860192|gb|EFL83269.1| MotA/TolQ/ExbB proton channel family protein [Burkholderiales
bacterium 1_1_47]
Length = 223
Score = 40.0 bits (92), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 52/101 (51%), Gaps = 4/101 (3%)
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI--PGIIESLISILLGLC 187
++L L ++ L+G+LG ++GM+ F IA S + + GI ++LI+ GL
Sbjct: 123 KRLPLLATLGRISPLLGLLGTIIGMIQTFAVIAQSRSGIDMELLAEGIWQALITTATGLI 182
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
++IP+ Y F+ + AN+ A+L +Q++ N
Sbjct: 183 IAIPAVFCYRIFLSIESNRLDYLNRVANK--AVLYKQSQNN 221
>gi|254787159|ref|YP_003074588.1| transporter proton channel domain containing protein
[Teredinibacter turnerae T7901]
gi|237686247|gb|ACR13511.1| transporter, proton channel domain containing protein
[Teredinibacter turnerae T7901]
Length = 436
Score = 40.0 bits (92), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 55/104 (52%), Gaps = 2/104 (1%)
Query: 119 VAIARELEEITEK-LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-II 176
VA RE E+ + + + ++ L+G+LG V GM+ F+ + + + + ++ G I
Sbjct: 329 VACLREHRFRIERFMGVVATSAAVAPLLGLLGTVSGMITTFKMMTIFGAGDAATVSGGIS 388
Query: 177 ESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAI 220
E+L++ LGL V+IPS + ++ + Q+E A + S +
Sbjct: 389 EALVTTELGLIVAIPSLVVSALLTRKAQSYNNQLETLAIKLSKL 432
>gi|297521622|ref|ZP_06940008.1| biopolymer transport protein ExbB [Escherichia coli OP50]
Length = 100
Score = 40.0 bits (92), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Query: 149 GAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFA 207
G V G+M F IA + N+ V PGI E+L++ +GL +IP+ + YN F F
Sbjct: 3 GTVWGIMNSFIGIAQTQTTNLAVVAPGIAEALLATAIGLVAAIPAVVIYNVFARQIGGFK 62
Query: 208 MQMEGFANEFSAILSRQTE 226
+ A + + SR +
Sbjct: 63 AMLGDVAAQVLLLQSRDLD 81
>gi|94501942|ref|ZP_01308451.1| MotA/TolQ/ExbB proton channel family protein [Oceanobacter sp.
RED65]
gi|94425936|gb|EAT10935.1| MotA/TolQ/ExbB proton channel family protein [Oceanobacter sp.
RED65]
Length = 220
Score = 40.0 bits (92), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 42/70 (60%), Gaps = 2/70 (2%)
Query: 144 LVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIE 201
L+G+ G VLGM+ F+++ AG + V GI ++L++ +GL V+IP ++ + +
Sbjct: 126 LLGLFGTVLGMIEAFKAMEAAGSQVDPAVLSGGIWQALLTTAVGLAVAIPVTLIHGALEK 185
Query: 202 DSKKFAMQME 211
++ A QME
Sbjct: 186 RAENTAAQME 195
>gi|301057360|ref|ZP_07198478.1| transporter, MotA/TolQ/ExbB proton channel family protein [delta
proteobacterium NaphS2]
gi|300448590|gb|EFK12237.1| transporter, MotA/TolQ/ExbB proton channel family protein [delta
proteobacterium NaphS2]
Length = 159
Score = 40.0 bits (92), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 48/80 (60%), Gaps = 2/80 (2%)
Query: 114 DRMM-DVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI 172
DR++ + A+ R++ + + +S + +++ L+G+LG V GM+ F+ I + N ++
Sbjct: 33 DRLVWETAVHRQVFPLNQHMSAILVLAAVAPLLGLLGTVTGMVDTFRVIGVAGTGNPQAL 92
Query: 173 P-GIIESLISILLGLCVSIP 191
GI E+LI+ GL ++IP
Sbjct: 93 ASGIEEALITTQTGLLIAIP 112
>gi|288818978|ref|YP_003433326.1| biopolymer transport protein [Hydrogenobacter thermophilus TK-6]
gi|288788378|dbj|BAI70125.1| biopolymer transport protein [Hydrogenobacter thermophilus TK-6]
gi|308752563|gb|ADO46046.1| tonB-system energizer ExbB [Hydrogenobacter thermophilus TK-6]
Length = 141
Score = 40.0 bits (92), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 46/81 (56%), Gaps = 3/81 (3%)
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA--GYYSNNVVSIPGIIESLISILL 184
E+T+ + ++ ++ S +G+LG VLG+M F +I G+ V + G+ +L + +
Sbjct: 51 ELTKNMHWIATIGSNAPYIGLLGTVLGIMLTFYTIGQEGFVDTKKVMV-GLALALKATAV 109
Query: 185 GLCVSIPSSIAYNKFIEDSKK 205
GL V+IPS+ YN + ++
Sbjct: 110 GLLVAIPSTALYNVLLRRVRE 130
>gi|330999341|ref|ZP_08323058.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Parasutterella excrementihominis YIT 11859]
gi|329575199|gb|EGG56750.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Parasutterella excrementihominis YIT 11859]
Length = 201
Score = 40.0 bits (92), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 52/101 (51%), Gaps = 4/101 (3%)
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI--PGIIESLISILLGLC 187
++L L ++ L+G+LG ++GM+ F IA S + + GI ++LI+ GL
Sbjct: 101 KRLPLLATLGRISPLLGLLGTIIGMIQTFAVIAQSRSGIDMELLAEGIWQALITTATGLI 160
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
++IP+ Y F+ + AN+ A+L +Q++ N
Sbjct: 161 IAIPAVFCYRIFLSIESNRLDYLNRVANK--AVLYKQSQNN 199
>gi|329910417|ref|ZP_08275302.1| Ferric siderophore transport system, biopolymer transport protein
ExbB [Oxalobacteraceae bacterium IMCC9480]
gi|327546185|gb|EGF31231.1| Ferric siderophore transport system, biopolymer transport protein
ExbB [Oxalobacteraceae bacterium IMCC9480]
Length = 201
Score = 40.0 bits (92), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 87/194 (44%), Gaps = 23/194 (11%)
Query: 31 LFIFSILSWSVIIQKSVNFITLRRQ-------FREFEQLFWSGQSLETVCKSLKNHHNIG 83
L I S++ ++I+++ + LRR +E +++ +G+ + +L+ + +G
Sbjct: 15 LLIASVIGLALIVER---LLYLRRSRVLPAKLLQEVIRVYHNGKINAEILANLEQNSPLG 71
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
++ ++ D +P I +A A ELE L+ LG++++
Sbjct: 72 ------QVLAAGLRNVD----APRDIMKESIEEAGMASAHELERF---LTTLGTIATLAP 118
Query: 144 LVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDS 203
L+G+ G V+GM+ F + +N GI +L + GL +++P+ + Y F
Sbjct: 119 LMGLFGTVVGMIEIFGAQNATGANPAQLAHGISVALYNTGFGLAIAMPALVFYRHFRALV 178
Query: 204 KKFAMQMEGFANEF 217
F + ME A F
Sbjct: 179 DSFVVDMEQQAVRF 192
>gi|196228701|ref|ZP_03127567.1| MotA/TolQ/ExbB proton channel [Chthoniobacter flavus Ellin428]
gi|196226982|gb|EDY21486.1| MotA/TolQ/ExbB proton channel [Chthoniobacter flavus Ellin428]
Length = 222
Score = 40.0 bits (92), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 55/103 (53%), Gaps = 11/103 (10%)
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI---AGYYSNNVVSIPGIIESLI 180
E+ + +L L +++ L+G+LG V+G++ F ++ +G+ S +S GI +SL+
Sbjct: 99 EMPRLERRLGLLATLAFITPLIGLLGTVVGLIESFVNVTSQSGFASATDIS-SGIYQSLL 157
Query: 181 SILLGLCVSIPSSIAY-------NKFIEDSKKFAMQMEGFANE 216
+ GL V+IP ++ Y N + D ++ +++ +E
Sbjct: 158 TTAGGLVVAIPCAVGYSYLSSRVNALMHDMERAGIEIVNLISE 200
>gi|254443026|ref|ZP_05056502.1| transporter, MotA/TolQ/ExbB proton channel family, putative
[Verrucomicrobiae bacterium DG1235]
gi|198257334|gb|EDY81642.1| transporter, MotA/TolQ/ExbB proton channel family, putative
[Verrucomicrobiae bacterium DG1235]
Length = 167
Score = 40.0 bits (92), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 51/98 (52%), Gaps = 6/98 (6%)
Query: 120 AIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQ--SIAGYYSNNVVSIPGIIE 177
A+ REL+ I L+ + ++S L+G+ G V GM+ F+ I G + + GI +
Sbjct: 56 AMKRELQRIY-PLNIIATLSP---LIGLFGTVAGMITSFRMIVITGVSGDATIVADGISQ 111
Query: 178 SLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFAN 215
+L++ GL V IP+ Y+ F +F+ +E +N
Sbjct: 112 ALVTTAAGLIVGIPTLAFYHYFKNRLSRFSSVIEDNSN 149
>gi|255533971|ref|YP_003094343.1| MotA/TolQ/ExbB proton channel [Pedobacter heparinus DSM 2366]
gi|255346955|gb|ACU06281.1| MotA/TolQ/ExbB proton channel [Pedobacter heparinus DSM 2366]
Length = 280
Score = 40.0 bits (92), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 54/107 (50%), Gaps = 11/107 (10%)
Query: 119 VAIARELEEIT--------EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+AI +++EE T + L+ + ++ S G L G+LG V GM+ F +A + +
Sbjct: 164 LAIQKDIEEATTLEMPMLEQNLTVIATLVSVGTLTGLLGTVTGMIKAFGGLANSGAPDQA 223
Query: 171 SIP-GIIESLISILLGLCVSIPSSIAYNKFIE--DSKKFAMQMEGFA 214
++ GI E+LI+ G+ S + I YN D +A+ GF+
Sbjct: 224 ALATGISEALINTATGIGTSTFAIIMYNILTSKIDKLTYAIDEAGFS 270
>gi|288940616|ref|YP_003442856.1| MotA/TolQ/ExbB proton channel [Allochromatium vinosum DSM 180]
gi|288895988|gb|ADC61824.1| MotA/TolQ/ExbB proton channel [Allochromatium vinosum DSM 180]
Length = 220
Score = 40.0 bits (92), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 86/204 (42%), Gaps = 23/204 (11%)
Query: 15 ALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCK 74
A +Q+ I+ L+ I L+ +VI++++ LRR R G +L
Sbjct: 4 AYLLQLANQSGGILYLMVILLTLALTVIVERT---WVLRRVTRH-------GAALTQALT 53
Query: 75 SLKNHHNIGLAAIFMSAMSEW-----KKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
L GL ++ + + + A + + R+D + I R + +
Sbjct: 54 PLAAQDRNGLTSLRETQARHLHGALLETTLAASAEADPDLASRLDEV----ILRHVPLLD 109
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA--GYYSNNVVSIPGIIESLISILLGLC 187
+L L + + L+G+LG ++GM FQ +A G N V G+ E+L++ GL
Sbjct: 110 RRLWVLDTTVTLAPLLGLLGTIIGMFHAFQVLAEPGAAPNAVTG--GVAEALVATAAGLL 167
Query: 188 VSIPSSIAYNKFIEDSKKFAMQME 211
+++ + +N E + Q++
Sbjct: 168 IAVIGLVCFNGLNERVRLAVHQLD 191
>gi|218890818|ref|YP_002439682.1| putative tolQ-type transport protein [Pseudomonas aeruginosa
LESB58]
gi|218771041|emb|CAW26806.1| probable tolQ-type transport protein [Pseudomonas aeruginosa
LESB58]
Length = 211
Score = 40.0 bits (92), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 47/91 (51%), Gaps = 7/91 (7%)
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP----GIIESLI 180
+ E+ L+ LG++++ L+G+LG V GM+ F + N + + P GI ++LI
Sbjct: 100 IHELERYLNALGTIAAMAPLLGLLGTVFGMIQIF---GAFMDNGMANSPMLAAGISKALI 156
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
+ GL V+IP+ + + + + ME
Sbjct: 157 TTAAGLLVAIPAVFFHRYLLRRVDELVIAME 187
>gi|87308723|ref|ZP_01090862.1| probable TolQ-type transport protein [Blastopirellula marina DSM
3645]
gi|87288434|gb|EAQ80329.1| probable TolQ-type transport protein [Blastopirellula marina DSM
3645]
Length = 279
Score = 40.0 bits (92), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 49/89 (55%), Gaps = 2/89 (2%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVS- 171
+++ ++ ++A + + K+ +L + + +VG+LG V GM+ FQ +A +
Sbjct: 152 VEKALEDSVAEQSARLFRKIEYLSVIGNIAPMVGLLGTVTGMIFAFQQVASTQGAAGAAD 211
Query: 172 -IPGIIESLISILLGLCVSIPSSIAYNKF 199
GI ++L++ + GL V+IPS A+ F
Sbjct: 212 LAEGIYQALVTTVGGLLVAIPSLGAFAVF 240
>gi|15598179|ref|NP_251673.1| tolQ-type transport protein [Pseudomonas aeruginosa PAO1]
gi|107102532|ref|ZP_01366450.1| hypothetical protein PaerPA_01003596 [Pseudomonas aeruginosa PACS2]
gi|116050985|ref|YP_790190.1| putative tolQ-type transport protein [Pseudomonas aeruginosa
UCBPP-PA14]
gi|152985890|ref|YP_001347550.1| putative tolQ-type transport protein [Pseudomonas aeruginosa PA7]
gi|254235957|ref|ZP_04929280.1| hypothetical protein PACG_01912 [Pseudomonas aeruginosa C3719]
gi|254241689|ref|ZP_04935011.1| hypothetical protein PA2G_02397 [Pseudomonas aeruginosa 2192]
gi|296388524|ref|ZP_06877999.1| putative tolQ-type transport protein [Pseudomonas aeruginosa PAb1]
gi|313108225|ref|ZP_07794304.1| putative tolQ-type transport protein [Pseudomonas aeruginosa 39016]
gi|9949082|gb|AAG06371.1|AE004723_15 probable tolQ-type transport protein [Pseudomonas aeruginosa PAO1]
gi|115586206|gb|ABJ12221.1| putative tolQ-type transport protein [Pseudomonas aeruginosa
UCBPP-PA14]
gi|126167888|gb|EAZ53399.1| hypothetical protein PACG_01912 [Pseudomonas aeruginosa C3719]
gi|126195067|gb|EAZ59130.1| hypothetical protein PA2G_02397 [Pseudomonas aeruginosa 2192]
gi|150961048|gb|ABR83073.1| probable tolQ-type transport protein [Pseudomonas aeruginosa PA7]
gi|310880806|gb|EFQ39400.1| putative tolQ-type transport protein [Pseudomonas aeruginosa 39016]
Length = 211
Score = 40.0 bits (92), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 47/91 (51%), Gaps = 7/91 (7%)
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP----GIIESLI 180
+ E+ L+ LG++++ L+G+LG V GM+ F + N + + P GI ++LI
Sbjct: 100 IHELERYLNALGTIAAMAPLLGLLGTVFGMIQIF---GAFMDNGMANSPMLAAGISKALI 156
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
+ GL V+IP+ + + + + ME
Sbjct: 157 TTAAGLLVAIPAVFFHRYLLRRVDELVIAME 187
>gi|296448309|ref|ZP_06890201.1| MotA/TolQ/ExbB proton channel [Methylosinus trichosporium OB3b]
gi|296254186|gb|EFH01321.1| MotA/TolQ/ExbB proton channel [Methylosinus trichosporium OB3b]
Length = 224
Score = 40.0 bits (92), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 54/113 (47%), Gaps = 2/113 (1%)
Query: 101 KGARSPIGIQDR--IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFF 158
+ AR ++DR + ++ AI +E+ I L L ++ + L+G+LG ++GM F
Sbjct: 80 RAAREAPNLRDRTLLQARIEEAILQEVPAIDRSLWLLDTIVTLAPLLGLLGTIIGMFNSF 139
Query: 159 QSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
Q + S+ G+ E+L++ GL ++I +N + Q+E
Sbjct: 140 QVLGKPGSSPTDITAGVAEALVATAAGLFIAIVGVFFFNGLQTRVRLHVHQLE 192
>gi|333029291|ref|ZP_08457352.1| MotA/TolQ/ExbB proton channel [Bacteroides coprosuis DSM 18011]
gi|332739888|gb|EGJ70370.1| MotA/TolQ/ExbB proton channel [Bacteroides coprosuis DSM 18011]
Length = 237
Score = 40.0 bits (92), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 58/107 (54%), Gaps = 6/107 (5%)
Query: 96 KKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMM 155
+K ++ R +Q I+ + ++ E+ ++ + L+F+ +++ ++G LG V GM+
Sbjct: 109 EKGINRLGRPVNDVQAAIENVGNL----EVSKLEKGLNFMATIAGGAPMIGFLGTVTGMV 164
Query: 156 GFFQSIAGYYSNNVVSI--PGIIESLISILLGLCVSIPSSIAYNKFI 200
F +A +N +++ GI E++I+ + GL V I + AYN +
Sbjct: 165 RAFYEMANAGNNVDITLLSGGIYEAMITTIGGLVVGIIAMFAYNYLV 211
>gi|49079200|gb|AAT49865.1| PA2983 [synthetic construct]
Length = 212
Score = 40.0 bits (92), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 47/91 (51%), Gaps = 7/91 (7%)
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP----GIIESLI 180
+ E+ L+ LG++++ L+G+LG V GM+ F + N + + P GI ++LI
Sbjct: 100 IHELERYLNALGTIAAMAPLLGLLGTVFGMIQIF---GAFMDNGMANSPMLAAGISKALI 156
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
+ GL V+IP+ + + + + ME
Sbjct: 157 TTAAGLLVAIPAVFFHRYLLRRVDELVIAME 187
>gi|261840053|gb|ACX99818.1| biopolymer transport ExbB protein; putative membrane protein
[Helicobacter pylori 52]
Length = 140
Score = 40.0 bits (92), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQS--IAGYYSNNVVSIPGIIESLISILL 184
++T+ L+ L + S VG+LG VLG+M F ++G + + G+ +L + L
Sbjct: 51 DLTKNLTILYVIYSNAPYVGLLGTVLGIMVIFYDMGVSGGMDAKTIMV-GLSLALKATAL 109
Query: 185 GLCVSIPSSIAYNKFIEDS 203
GL V+IP+ IAYN + S
Sbjct: 110 GLAVAIPTLIAYNSLLRKS 128
>gi|109946796|ref|YP_664024.1| biopolymer transport protein [Helicobacter acinonychis str. Sheeba]
gi|109714017|emb|CAJ99025.1| biopolymer transport protein [Helicobacter acinonychis str. Sheeba]
Length = 150
Score = 40.0 bits (92), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 54/107 (50%), Gaps = 8/107 (7%)
Query: 115 RMMDVAIARELE-EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP 173
RM D R+LE + ++L+ + ++ S +G+LG V+G+M F + S + +
Sbjct: 35 RMNDYKDRRKLELALHKRLTLVATIGSNAPYIGLLGTVVGIMLTFMDLG---SASGIDTK 91
Query: 174 GIIESLISIL----LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANE 216
I+ +L L +GL V+IP+ + YN + S+ + + F N
Sbjct: 92 AIMTNLALALKATGMGLLVAIPAIVIYNLLVRKSEILVTKWDIFHNP 138
>gi|292493797|ref|YP_003529236.1| MotA/TolQ/ExbB proton channel [Nitrosococcus halophilus Nc4]
gi|291582392|gb|ADE16849.1| MotA/TolQ/ExbB proton channel [Nitrosococcus halophilus Nc4]
Length = 208
Score = 40.0 bits (92), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 57/101 (56%), Gaps = 4/101 (3%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA--GYYSNNVV 170
+ R +D A A + +E+ + + + S+ L+G+LG V+GM+ F+S+A ++ +
Sbjct: 87 LRRHLDEAFATQEKELKKFSTLIRSIVVIAPLLGLLGTVVGMIETFESLADMALFTQSGG 146
Query: 171 SIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
GI ++L + +GL V+IP + K + D K+ ++ME
Sbjct: 147 IAGGISQALFTTQMGLVVAIPGLLI--KGLLDRKQKQLEME 185
>gi|220934542|ref|YP_002513441.1| MotA/TolQ/ExbB proton channel [Thioalkalivibrio sp. HL-EbGR7]
gi|219995852|gb|ACL72454.1| MotA/TolQ/ExbB proton channel [Thioalkalivibrio sp. HL-EbGR7]
Length = 206
Score = 40.0 bits (92), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 91/195 (46%), Gaps = 30/195 (15%)
Query: 24 VKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIG 83
+ C + L I WS + Q+ VN R+ + Q+ +GQ E + +++ +G
Sbjct: 16 IACSVVALAIIVERFWS-LQQRRVNP---RQLVVQIWQMIQAGQLTEDRLRQVRDGSPLG 71
Query: 84 --LAA--IFMSAMSE-WKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSM 138
LAA I M + K++ ++ R +A +LE L+ LG++
Sbjct: 72 RVLAAGLINMGHTRDVMKEAIEETGRH---------------VAHDLERF---LNTLGTI 113
Query: 139 SSAGLLVGILGAVLGMMGFFQSIA--GYYSNNVVSIPGIIESLISILLGLCVSIPSSIAY 196
++ L+G+LG V+GM+ F I G S ++ GI ++LI+ G+ V++PS I +
Sbjct: 114 AAITPLLGLLGTVVGMIQVFSVITDVGVGSPGELA-GGISQALITTAAGISVAVPSLIFH 172
Query: 197 NKFIEDSKKFAMQME 211
F + ++ME
Sbjct: 173 RYFRGRVDELVLEME 187
>gi|297182080|gb|ADI18253.1| biopolymer transport proteins [uncultured Chromatiales bacterium
HF0200_41F04]
Length = 222
Score = 39.7 bits (91), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 68/138 (49%), Gaps = 22/138 (15%)
Query: 81 NIGLAAIFMSAMSEW---KKSC-DKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLG 136
N G ++ A+ +W ++C DK RS IG+ + ++ + + EE+ E+L+
Sbjct: 53 NPGRFSMLHEALDQWSDGPQTCMDKLDRSQIGLSPILRFGLENRDSPDTEELREELARRA 112
Query: 137 S---------MSSAGLL------VGILGAVLGMMGFF---QSIAGYYSNNVVSIPGIIES 178
+ M L+ +G+LG VLGM+ F +S AG ++ GI E+
Sbjct: 113 TNFLYPYGKYMRPLELIYYLAPVLGLLGTVLGMIDAFRGLESSAGMDKDSTALAGGIWEA 172
Query: 179 LISILLGLCVSIPSSIAY 196
L++ +GL ++IP ++ +
Sbjct: 173 LLTTAVGLSIAIPFTVVH 190
>gi|189499602|ref|YP_001959072.1| MotA/TolQ/ExbB proton channel [Chlorobium phaeobacteroides BS1]
gi|189495043|gb|ACE03591.1| MotA/TolQ/ExbB proton channel [Chlorobium phaeobacteroides BS1]
Length = 248
Score = 39.7 bits (91), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 31/141 (21%), Positives = 65/141 (46%), Gaps = 13/141 (9%)
Query: 78 NHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDR------IDRMMDVAIARELEEITEK 131
+ H +AA+ + ++ I DR +++ ++ A E+ + +
Sbjct: 98 DDHQSSVAAVLRAVFQRYQMLTQHN------ISDREKKISEMEKAVEEATTMEMPLLEKN 151
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISILLGLCVSI 190
L + +++S +VG+LG LGM+ F+++A + + V + GI E+L + LG+ I
Sbjct: 152 LVAISTIASISTMVGLLGTTLGMIRAFEAMATSGAPDAVQLSLGISEALFNTALGIVGGI 211
Query: 191 PSSIAYNKFIEDSKKFAMQME 211
+ YN F +F ++
Sbjct: 212 MGIVTYNVFTNRVDRFTYMID 232
>gi|323141187|ref|ZP_08076088.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Phascolarctobacterium sp. YIT 12067]
gi|322414330|gb|EFY05148.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Phascolarctobacterium sp. YIT 12067]
Length = 208
Score = 39.7 bits (91), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 47/91 (51%), Gaps = 8/91 (8%)
Query: 100 DKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQ 159
D G R + + DR++D LE+ LS + +S ++G+LG + GM+ F
Sbjct: 88 DLGQRLETIVYTKADRIID-----SLEKNINYLSVVIGLSP---MLGLLGTITGMISSFN 139
Query: 160 SIAGYYSNNVVSIPGIIESLISILLGLCVSI 190
++ N + GI E+LI+ + GLC++I
Sbjct: 140 ALNERTQNPMAVTAGIGEALITTVFGLCIAI 170
>gi|330720938|gb|EGG99112.1| MotA/TolQ/ExbB proton channel family protein [gamma proteobacterium
IMCC2047]
Length = 465
Score = 39.7 bits (91), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Query: 120 AIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIES- 178
AI RE+ + + ++ + + L+G+LG V GM+ FQ++ + + + ++ G I S
Sbjct: 356 AILREIPPLEKWVNVIKLSAMVAPLLGLLGTVSGMILTFQALTIFGAGDPKAMAGGISSA 415
Query: 179 LISILLGLCVSIPS 192
L++ LGLCV+IP+
Sbjct: 416 LVTTALGLCVAIPA 429
>gi|149280577|ref|ZP_01886693.1| biopolymer transport protein [Pedobacter sp. BAL39]
gi|149228692|gb|EDM34095.1| biopolymer transport protein [Pedobacter sp. BAL39]
Length = 275
Score = 39.7 bits (91), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 54/107 (50%), Gaps = 11/107 (10%)
Query: 119 VAIARELEEIT--------EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+AI +++EE T + L+ + ++ S G L G+LG V GM+ F +A + +
Sbjct: 159 LAIQKDIEEATTLEMPMLEQNLTVIATLVSVGTLTGLLGTVTGMIKAFGGLANSGAPDQA 218
Query: 171 SIP-GIIESLISILLGLCVSIPSSIAYNKFIE--DSKKFAMQMEGFA 214
++ GI E+LI+ G+ S + I YN D +A+ GF+
Sbjct: 219 ALATGISEALINTATGIGTSTFAIIMYNILTSKIDKLTYAIDEAGFS 265
>gi|327539930|gb|EGF26531.1| TolQ-type transport protein [Rhodopirellula baltica WH47]
Length = 281
Score = 39.7 bits (91), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 76/173 (43%), Gaps = 10/173 (5%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAI 87
+ L +F LS +++ +N + RR + +E + L + N G +
Sbjct: 81 VAYLIVFLALSVTLVSLFVMNMLAARRD------TLCPTELVEEFSQRLAANDNQGAYDL 134
Query: 88 FMSAMSEWKKSCDKG-ARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVG 146
+ S + G A+ G ++ M +V E ++ +LS++ + + ++G
Sbjct: 135 AKADESVLGQVLAAGLAKVSKGYNKALEAMQEVG-EEESMKLEHRLSYMALIGNLSPMIG 193
Query: 147 ILGAVLGMMGFFQSIA--GYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYN 197
+ G V GM+ FQ IA G GI +L + L+GL V+IP+ AYN
Sbjct: 194 LFGTVQGMISSFQVIALGGSTPKPSDLAAGISTALFTTLVGLAVAIPAIAAYN 246
>gi|291532440|emb|CBL05553.1| Biopolymer transport proteins [Megamonas hypermegale ART12/1]
Length = 205
Score = 39.7 bits (91), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 56/113 (49%), Gaps = 5/113 (4%)
Query: 116 MMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-G 174
+++V + + E+L +L + + L+G+LG ++GM+ F S+ ++I G
Sbjct: 96 LLEVQSGISISKFRERLYYLNVIVTMAPLLGLLGTIIGMISAF-SVFNLEEGQAIAITGG 154
Query: 175 IIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEG 227
+ E+LI+ GLCV+I S + F++ + ME FS I T G
Sbjct: 155 VGEALIATATGLCVAIVSLAIHAYFVQRIDRIVTDME---QAFSLIEGYITRG 204
>gi|261838657|gb|ACX98423.1| biopolymer transport accessory protein [Helicobacter pylori 51]
Length = 161
Score = 39.7 bits (91), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQS--IAGYYSNNVVSIPGIIESLISILL 184
++T+ L+ L + S VG+LG VLG+M F ++G + + G+ +L + L
Sbjct: 72 DLTKNLTILYVIYSNAPYVGLLGTVLGIMVIFYDMGVSGGMDAKTIMV-GLSLALKATAL 130
Query: 185 GLCVSIPSSIAYNKFIEDS 203
GL V+IP+ IAYN + S
Sbjct: 131 GLAVAIPTLIAYNSLLRKS 149
>gi|209517608|ref|ZP_03266446.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. H160]
gi|209501904|gb|EEA01922.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. H160]
Length = 229
Score = 39.7 bits (91), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 49/102 (48%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
++ +D +D AI RE I L L ++ + L+G+ G ++GM FQ ++ +
Sbjct: 91 REELDACLDEAIMREAPNIDRFLWVLDTIVTLAPLLGLFGTIVGMFNAFQVLSNPGNAPT 150
Query: 170 VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
G+ E+LI+ GL V++ + +N + Q+E
Sbjct: 151 QVTGGVAEALIATASGLFVAMIGLVFFNGLHTRVRGVVHQLE 192
>gi|296447216|ref|ZP_06889146.1| MotA/TolQ/ExbB proton channel [Methylosinus trichosporium OB3b]
gi|296255275|gb|EFH02372.1| MotA/TolQ/ExbB proton channel [Methylosinus trichosporium OB3b]
Length = 213
Score = 39.7 bits (91), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 96/226 (42%), Gaps = 28/226 (12%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
IS +FM G K ++ +L + S+ +W +I++ V+ + +
Sbjct: 5 SISPVTMFMNAGPVGKVVMGMLILASVWTWVLIVEGVVSVVRI--------------GRA 50
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
++ +G + A E S D S ++R+ +M A REL
Sbjct: 51 ARSARAGGAAGLLGP----VEAAGEHAGSFDLPGESIGEKRERVAEIMSRA-GRELLTSA 105
Query: 130 EK-LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
E L L +SS VG+ G V G+M F IA ++ V PGI E+L + GL
Sbjct: 106 EGGLPNLAVISSVAPFVGLFGTVWGIMTSFAGIAQSQDTSLAVVAPGIAEALAATAYGLA 165
Query: 188 VSIPSSIAYNK----FIEDSKKFAMQMEGFA---NEFSAILSRQTE 226
+IP+S+ YN+ F ++ A +E A A+++R+ E
Sbjct: 166 AAIPASVGYNRIGAAFARAGQQVAHYVEDKALAITSGHAVVTRKRE 211
>gi|217032093|ref|ZP_03437593.1| hypothetical protein HPB128_16g53 [Helicobacter pylori B128]
gi|298735636|ref|YP_003728161.1| biopolymer transport exbB protein [Helicobacter pylori B8]
gi|216946241|gb|EEC24849.1| hypothetical protein HPB128_16g53 [Helicobacter pylori B128]
gi|298354825|emb|CBI65697.1| Biopolymer transport exbB protein [Helicobacter pylori B8]
Length = 145
Score = 39.7 bits (91), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQS--IAGYYSNNVVSIPGIIESLISILL 184
++T+ L+ L + S VG+LG VLG+M F ++G + + G+ +L + L
Sbjct: 56 DLTKNLTILYVIYSNAPYVGLLGTVLGIMVIFYDMGVSGGMDAKTIMV-GLSLALKATAL 114
Query: 185 GLCVSIPSSIAYNKFIEDS 203
GL V+IP+ IAYN + S
Sbjct: 115 GLAVAIPTLIAYNSLLRKS 133
>gi|284097747|ref|ZP_06385748.1| MotA/TolQ/ExbB proton channel [Candidatus Poribacteria sp. WGA-A3]
gi|283830743|gb|EFC34852.1| MotA/TolQ/ExbB proton channel [Candidatus Poribacteria sp. WGA-A3]
Length = 133
Score = 39.7 bits (91), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 60/119 (50%), Gaps = 6/119 (5%)
Query: 108 GIQDR---IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFF--QSIA 162
GI+ R ++ M+ E+ + L ++ + L+G+LG ++GM+ F +I
Sbjct: 7 GIRSRSAAPEKAMEATGLVEVSRMKRGFPSLDTIITLSPLLGLLGTIIGMIDSFGIMAIE 66
Query: 163 GYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
G S + V+ G+ E+LI G+ V++ + I YN F+ ++ Q+E +A + L
Sbjct: 67 GMGSPHAVT-GGVAEALICTAGGITVAVLALIPYNYFVARTENITEQIEHYATRTESAL 124
>gi|332674139|gb|AEE70956.1| TonB-system energizer ExbB [Helicobacter pylori 83]
Length = 145
Score = 39.7 bits (91), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQS--IAGYYSNNVVSIPGIIESLISILL 184
++T+ L+ L + S VG+LG VLG+M F ++G + + G+ +L + L
Sbjct: 56 DLTKNLTILYVIYSNAPYVGLLGTVLGIMVIFYDMGVSGGMDAKTIMV-GLSLALKATAL 114
Query: 185 GLCVSIPSSIAYNKFIEDS 203
GL V+IP+ IAYN + S
Sbjct: 115 GLAVAIPTLIAYNSLLRKS 133
>gi|297624601|ref|YP_003706035.1| MotA/TolQ/ExbB proton channel [Truepera radiovictrix DSM 17093]
gi|297165781|gb|ADI15492.1| MotA/TolQ/ExbB proton channel [Truepera radiovictrix DSM 17093]
Length = 243
Score = 39.7 bits (91), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISI 182
E + +T L L +++ L+G+LG V GM+ F I+ + N ++ GI ++L++
Sbjct: 98 EEQRLTRGLRPLATIAQVATLLGLLGTVTGMIVAFAEISQQGTGNPAALAGGIGQALVTT 157
Query: 183 LLGLCVSIPSSIAYN 197
GL V+IP+ I ++
Sbjct: 158 AAGLIVAIPAVIGHS 172
>gi|116329668|ref|YP_799387.1| TolQ-like transport protein [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
gi|116332553|ref|YP_802270.1| TolQ-like transport protein [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
gi|116122561|gb|ABJ80454.1| TolQ-like transport protein [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
gi|116127420|gb|ABJ77512.1| TolQ-like transport protein [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
Length = 204
Score = 39.7 bits (91), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 53/116 (45%), Gaps = 1/116 (0%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
+ + + + I E E+ L L ++ + +G+LG VLG++ F + S
Sbjct: 88 HEALAELQEGKIIGERVELENHLPILNTLGNNAPFIGLLGTVLGVIKAFYGLGTLGSTGA 147
Query: 170 -VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+ I +L++ GL V+IP +A N F K +E + EF A LSR+
Sbjct: 148 EFVMRSISTALLATAAGLGVAIPVVMANNYFTRKLKVIQANLEILSKEFLASLSRK 203
>gi|217033655|ref|ZP_03439083.1| hypothetical protein HP9810_899g91 [Helicobacter pylori 98-10]
gi|216944001|gb|EEC23435.1| hypothetical protein HP9810_899g91 [Helicobacter pylori 98-10]
gi|317178078|dbj|BAJ55867.1| biopolymer transport protein [Helicobacter pylori F16]
Length = 145
Score = 39.7 bits (91), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQS--IAGYYSNNVVSIPGIIESLISILL 184
++T+ L+ L + S VG+LG VLG+M F ++G + + G+ +L + L
Sbjct: 56 DLTKNLTILYVIYSNAPYVGLLGTVLGIMVIFYDMGVSGGMDAKTIMV-GLSLALKATAL 114
Query: 185 GLCVSIPSSIAYNKFIEDS 203
GL V+IP+ IAYN + S
Sbjct: 115 GLAVAIPTLIAYNSLLRKS 133
>gi|317182584|dbj|BAJ60368.1| biopolymer transport protein [Helicobacter pylori F57]
Length = 145
Score = 39.7 bits (91), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQS--IAGYYSNNVVSIPGIIESLISILL 184
++T+ L+ L + S VG+LG VLG+M F ++G + + G+ +L + L
Sbjct: 56 DLTKNLTILYVIYSNAPYVGLLGTVLGIMVIFYDMGVSGGMDAKTIMV-GLSLALKATAL 114
Query: 185 GLCVSIPSSIAYNKFIEDS 203
GL V+IP+ IAYN + S
Sbjct: 115 GLAVAIPTLIAYNSLLRKS 133
>gi|254506695|ref|ZP_05118835.1| MotA/TolQ/ExbB proton channel family protein [Vibrio
parahaemolyticus 16]
gi|219550276|gb|EED27261.1| MotA/TolQ/ExbB proton channel family protein [Vibrio
parahaemolyticus 16]
Length = 454
Score = 39.7 bits (91), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Query: 115 RMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGY-YSNNVVSIP 173
R+++V + E + + LS L +++ ++G+LG V GM+ FQ I + S+ V
Sbjct: 328 RLLEVVV-DEQTHLEKGLSMLKLLAALAPMLGLLGTVTGMIETFQVITQFGNSDPKVMAG 386
Query: 174 GIIESLISILLGLCVSIPSSIAYN 197
GI +L++ +LGL ++P +A+N
Sbjct: 387 GISMALVTTVLGLVAAMPLLLAHN 410
>gi|208435235|ref|YP_002266901.1| biopolymer transport protein [Helicobacter pylori G27]
gi|208433164|gb|ACI28035.1| biopolymer transport protein [Helicobacter pylori G27]
gi|317014729|gb|ADU82165.1| biopolymer transport protein [Helicobacter pylori Gambia94/24]
Length = 145
Score = 39.7 bits (91), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQS--IAGYYSNNVVSIPGIIESLISILL 184
++T+ L+ L + S VG+LG VLG+M F ++G + + G+ +L + L
Sbjct: 56 DLTKNLTILYVIYSNAPYVGLLGTVLGIMVIFYDMGVSGGMDAKTIMV-GLSLALKATAL 114
Query: 185 GLCVSIPSSIAYNKFIEDS 203
GL V+IP+ IAYN + S
Sbjct: 115 GLAVAIPTLIAYNSLLRKS 133
>gi|330970457|gb|EGH70523.1| biopolymer transport protein ExbB [Pseudomonas syringae pv. aceris
str. M302273PT]
Length = 95
Score = 39.7 bits (91), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 153 GMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
G+M QSI S ++ ++ G I +L++ +G+ V++P+ + YN F+ K M+
Sbjct: 2 GIMEALQSIGVTGSASLEAVAGPIGHALVATGVGIAVAVPAVLIYNFFLRRLKLAVADMD 61
Query: 212 GFANEFSAILSR 223
FA++F A+ R
Sbjct: 62 DFAHDFDALAQR 73
>gi|296535347|ref|ZP_06897549.1| ferric siderophore transport system protein ExbB [Roseomonas
cervicalis ATCC 49957]
gi|296264331|gb|EFH10754.1| ferric siderophore transport system protein ExbB [Roseomonas
cervicalis ATCC 49957]
Length = 85
Score = 39.7 bits (91), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 31/50 (62%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREF 59
D+S+ LF+Q VK ++ L + S++ W++I++KS+ LRR+ +
Sbjct: 22 DMSMLGLFLQADWVVKAVMIALALASVICWAIIVEKSLLLGRLRREVAQL 71
>gi|262195327|ref|YP_003266536.1| MotA/TolQ/ExbB proton channel [Haliangium ochraceum DSM 14365]
gi|262078674|gb|ACY14643.1| MotA/TolQ/ExbB proton channel [Haliangium ochraceum DSM 14365]
Length = 245
Score = 39.7 bits (91), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 50/235 (21%), Positives = 100/235 (42%), Gaps = 45/235 (19%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
MD SI+ +Q + LF FS++ ++V +++ V + R+
Sbjct: 1 MDQSIWEWLVQ------ATLWCLFGFSVVVFAVAMERVVVLWRFTDRARKLS-------- 46
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGI-----QDRIDRM----MDV 119
+TV + L A E + +C++ +RSP+ +R R +D
Sbjct: 47 -DTVNRCL-----------MRGARGEGRSACER-SRSPLADVFLVGYERFGRSKPENVDS 93
Query: 120 AIARELEEI----TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGI 175
A+ RE + +L G++ + VG+ G V+G+M F+ + + + G+
Sbjct: 94 AVHRERARVMVSLKNRLWIPGTIGATAPFVGLFGTVVGIMEAFRDLERAEGSGQEAGIGV 153
Query: 176 I-----ESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+ E+LI+ +G+ V++ + I +N F + + M+ + +EF L T
Sbjct: 154 VSGHISEALIATAVGIFVAVIAVIVFNLFNQRIGRIGMEAKMLTDEFLEHLHEST 208
>gi|317011538|gb|ADU85285.1| biopolymer transport protein [Helicobacter pylori SouthAfrica7]
Length = 145
Score = 39.7 bits (91), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQS--IAGYYSNNVVSIPGIIESLISILL 184
++T+ L+ L + S VG+LG VLG+M F ++G + + G+ +L + L
Sbjct: 56 DLTKNLTILYVIYSNAPYVGLLGTVLGIMVIFYDMGVSGGMDAKTIMV-GLSLALKATAL 114
Query: 185 GLCVSIPSSIAYNKFIEDS 203
GL V+IP+ IAYN + S
Sbjct: 115 GLAVAIPTLIAYNSLLRKS 133
>gi|301057326|ref|ZP_07198444.1| transporter, MotA/TolQ/ExbB proton channel family protein [delta
proteobacterium NaphS2]
gi|300448556|gb|EFK12203.1| transporter, MotA/TolQ/ExbB proton channel family protein [delta
proteobacterium NaphS2]
Length = 467
Score = 39.7 bits (91), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 58/121 (47%), Gaps = 2/121 (1%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
+D I+ + AI +E + L L +++ L+G+LG V GM+ F I + + +
Sbjct: 344 RDIIESSLAEAILKETPRLERFLPALKVLAAIAPLLGLLGTVTGMINTFHVITVHGTGDP 403
Query: 170 VSIP-GIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEF-SAILSRQTEG 227
+ GI E+LI+ LGL V+IP + + + A ME A +A+L Q
Sbjct: 404 RLMAGGISEALITTQLGLAVAIPILVVTALLGRKASRIASDMEEKAMALIAALLKDQRPP 463
Query: 228 N 228
N
Sbjct: 464 N 464
>gi|297380520|gb|ADI35407.1| tonB-system energizer ExbB [Helicobacter pylori v225d]
Length = 145
Score = 39.7 bits (91), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQS--IAGYYSNNVVSIPGIIESLISILL 184
++T+ L+ L + S VG+LG VLG+M F ++G + + G+ +L + L
Sbjct: 56 DLTKNLTILYVIYSNAPYVGLLGTVLGIMVIFYDMGVSGGMDAKTIMV-GLSLALKATAL 114
Query: 185 GLCVSIPSSIAYNKFIEDS 203
GL V+IP+ IAYN + S
Sbjct: 115 GLAVAIPTLIAYNSLLRKS 133
>gi|254779880|ref|YP_003057986.1| Biopolymer transport accessory protein; putative membrane protein
[Helicobacter pylori B38]
gi|254001792|emb|CAX30023.1| Biopolymer transport accessory protein; putative membrane protein
[Helicobacter pylori B38]
Length = 145
Score = 39.7 bits (91), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQS--IAGYYSNNVVSIPGIIESLISILL 184
++T+ L+ L + S VG+LG VLG+M F ++G + + G+ +L + L
Sbjct: 56 DLTKNLTILYVIYSNAPYVGLLGTVLGIMVIFYDMGVSGGMDAKTIMV-GLSLALKATAL 114
Query: 185 GLCVSIPSSIAYNKFIEDS 203
GL V+IP+ IAYN + S
Sbjct: 115 GLAVAIPTLIAYNSLLRKS 133
>gi|317181061|dbj|BAJ58847.1| biopolymer transport protein [Helicobacter pylori F32]
Length = 145
Score = 39.7 bits (91), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQS--IAGYYSNNVVSIPGIIESLISILL 184
++T+ L+ L + S VG+LG VLG+M F ++G + + G+ +L + L
Sbjct: 56 DLTKNLTILYVIYSNAPYVGLLGTVLGIMVIFYDMGVSGGMDAKTIMV-GLSLALKATAL 114
Query: 185 GLCVSIPSSIAYNKFIEDS 203
GL V+IP+ IAYN + S
Sbjct: 115 GLAVAIPTLIAYNSLLRKS 133
>gi|24217342|ref|NP_714825.1| transport protein ExbB [Leptospira interrogans serovar Lai str.
56601]
gi|45655796|ref|YP_003605.1| ExbB [Leptospira interrogans serovar Copenhageni str. Fiocruz
L1-130]
gi|24202416|gb|AAN51840.1| TolQ-like transport protein [Leptospira interrogans serovar Lai
str. 56601]
gi|45602767|gb|AAS72242.1| ExbB [Leptospira interrogans serovar Copenhageni str. Fiocruz
L1-130]
Length = 204
Score = 39.7 bits (91), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 53/116 (45%), Gaps = 1/116 (0%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
+ + + + I E E+ L L ++ + +G+LG VLG++ F + S
Sbjct: 88 HEALSELQEGKIIGERIELENHLPILNTLGNNAPFIGLLGTVLGVIKAFYGLGTLGSTGA 147
Query: 170 -VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+ I +L++ GL V+IP +A N F K +E + EF A LSR+
Sbjct: 148 EFVMRSISTALLATAAGLGVAIPVVMANNYFTRKLKVIQANLEILSKEFLASLSRK 203
>gi|212637632|ref|YP_002314157.1| MotA/TolQ/ExbB proton channel [Shewanella piezotolerans WP3]
gi|212559116|gb|ACJ31570.1| MotA/TolQ/ExbB proton channel [Shewanella piezotolerans WP3]
Length = 412
Score = 39.7 bits (91), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 49/88 (55%), Gaps = 3/88 (3%)
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQ--SIAGYYSNNVVSIPGIIESLISILL 184
++ K+ L + ++ L+G+LG V GM+ F+ ++ G N+++ GI E+L++ L
Sbjct: 310 QLDSKMVMLAATAAVAPLLGLLGTVSGMIHTFEMMNLFGNQDQNMLA-GGISEALVTTEL 368
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEG 212
GL V++P+ + + + + Q+E
Sbjct: 369 GLVVAVPTLLLHAYINRRHQAYLAQLEA 396
>gi|90407977|ref|ZP_01216150.1| TonB system biopolymer transport component [Psychromonas sp. CNPT3]
gi|90310915|gb|EAS39027.1| TonB system biopolymer transport component [Psychromonas sp. CNPT3]
Length = 429
Score = 39.7 bits (91), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Query: 120 AIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGY-YSNNVVSIPGIIES 178
AI +E+ I + +S L ++S L+G+LG V GM+ F+ I S++ + GI ++
Sbjct: 318 AILKEVPTIKKGISTLAVIASIPPLLGLLGTVAGMIETFRVITEQGNSDSQLLAGGISQA 377
Query: 179 LISILLGLCVSIP 191
L++ LGL V+IP
Sbjct: 378 LLTTELGLMVAIP 390
>gi|32472814|ref|NP_865808.1| tolQ protein [Rhodopirellula baltica SH 1]
gi|32444051|emb|CAD73493.1| probable tolQ protein [Rhodopirellula baltica SH 1]
Length = 257
Score = 39.7 bits (91), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 76/173 (43%), Gaps = 10/173 (5%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAI 87
+ L +F LS +++ +N + RR + +E + L + N G +
Sbjct: 57 VAYLIVFLALSVTLVSLFVMNMLAARRD------TLCPTELVEEFSQRLAANDNQGAYDL 110
Query: 88 FMSAMSEWKKSCDKG-ARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVG 146
+ S + G A+ G ++ M +V E ++ +LS++ + + ++G
Sbjct: 111 AKADESVLGQVLAAGLAKVSKGYNKALEAMQEVG-EEESMKLEHRLSYMALIGNLSPMIG 169
Query: 147 ILGAVLGMMGFFQSIA--GYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYN 197
+ G V GM+ FQ IA G GI +L + L+GL V+IP+ AYN
Sbjct: 170 LFGTVQGMISSFQVIALGGSTPKPSDLAAGISTALFTTLVGLAVAIPAIAAYN 222
>gi|126640526|ref|YP_001083510.1| putative biopolymer transport protein (ExbB) [Acinetobacter
baumannii ATCC 17978]
Length = 183
Score = 39.7 bits (91), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 51/99 (51%), Gaps = 3/99 (3%)
Query: 121 IARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIES 178
I+ E + +S LG+++S VG+ G V G+ ++ +G V+ P + E+
Sbjct: 58 ISAEKANADKGISVLGTIASIAPFVGLFGTVWGIFHALVAVGKSGQAGLAQVATP-VGEA 116
Query: 179 LISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEF 217
LI LGL V+IP+ +AYN + ++ A ++ A+
Sbjct: 117 LIMTGLGLAVAIPAVLAYNICVRANRGLAHDLQDQAHSL 155
>gi|320353611|ref|YP_004194950.1| outer membrane transport energization protein ExbB [Desulfobulbus
propionicus DSM 2032]
gi|320122113|gb|ADW17659.1| outer membrane transport energization protein ExbB [Desulfobulbus
propionicus DSM 2032]
Length = 139
Score = 39.7 bits (91), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 54/103 (52%), Gaps = 8/103 (7%)
Query: 112 RIDRMMDVAIARELE-EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNN 168
R+D D R LE +T KL + ++ + +G+LG VLG+M F I AG+ +
Sbjct: 38 RVDEYQD---RRALELHLTHKLHLIATIGANAPYIGLLGTVLGIMLTFHDIGAAGFDTTK 94
Query: 169 VVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
+++ G+ +L + LGL V+IP+ YN + K +Q +
Sbjct: 95 IMT--GLALALKATALGLLVAIPAVTLYNLLLRRCKVLLIQWD 135
>gi|226355172|ref|YP_002784912.1| MotA/TolQ/ExbB proton channel family protein [Deinococcus deserti
VCD115]
gi|226317162|gb|ACO45158.1| putative MotA/TolQ/ExbB proton channel family protein [Deinococcus
deserti VCD115]
Length = 232
Score = 39.7 bits (91), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 50/112 (44%), Gaps = 16/112 (14%)
Query: 112 RIDRMMDVAIAR-------ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGY 164
R DR D A++ E + LS L + + L+G+LG V+GM+ F
Sbjct: 84 RADRGPDAAVSAMQSALLAEDSRLYAGLSALSTAAQVAPLLGLLGTVIGMVRSFL----V 139
Query: 165 YSNNVVSIP-----GIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
+S P GI E+L++ GL V+I + +A N + + A Q E
Sbjct: 140 FSQTSAPTPAQLATGISEALVNTAAGLVVAIIAYVARNALRARADRIATQAE 191
>gi|24373390|ref|NP_717433.1| MotA/TolQ/ExbB proton channel family protein [Shewanella oneidensis
MR-1]
gi|24347659|gb|AAN54877.1|AE015626_6 MotA/TolQ/ExbB proton channel family protein [Shewanella oneidensis
MR-1]
Length = 451
Score = 39.3 bits (90), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 117 MDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII 176
+D AI +E + ++ L +++ G ++G+LG V GM+ FQSI + + + + G I
Sbjct: 340 LDEAILKETPALEARIPILKVIAAIGPMLGLLGTVTGMIATFQSIQLFGTGDPKLMAGGI 399
Query: 177 E-SLISILLGLCVSIP 191
+L++ + GL ++P
Sbjct: 400 SMALVTTVQGLVAALP 415
>gi|210135495|ref|YP_002301934.1| biopolymer transport protein ExbB [Helicobacter pylori P12]
gi|210133463|gb|ACJ08454.1| biopolymer transport protein ExbB [Helicobacter pylori P12]
Length = 145
Score = 39.3 bits (90), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQS--IAGYYSNNVVSIPGIIESLISILL 184
++T+ L+ L + S VG+LG VLG+M F ++G + + G+ +L + L
Sbjct: 56 DLTKNLTILYVIYSNAPYVGLLGTVLGIMVVFYDMGVSGGMDAKTIMV-GLSLALKATAL 114
Query: 185 GLCVSIPSSIAYNKFIEDS 203
GL V+IP+ IAYN + S
Sbjct: 115 GLAVAIPTLIAYNSLLRKS 133
>gi|320334859|ref|YP_004171570.1| MotA/TolQ/ExbB proton channel [Deinococcus maricopensis DSM 21211]
gi|319756148|gb|ADV67905.1| MotA/TolQ/ExbB proton channel [Deinococcus maricopensis DSM 21211]
Length = 222
Score = 39.3 bits (90), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 52/111 (46%), Gaps = 9/111 (8%)
Query: 117 MDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP--- 173
M+ A+ E + L+ LG+++ L+G+LG V GM+ F +S P
Sbjct: 96 MNDAVLAEDARLYAGLTALGTVAQIAPLLGLLGTVFGMVRSFL----VFSQTTAPTPTQL 151
Query: 174 --GIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
GI E+L++ GL V+I + +A N + + A+ E F A LS
Sbjct: 152 ATGISEALVNTAGGLIVAILAYVARNALRARADRIAVSAERVREVFPAWLS 202
>gi|207092513|ref|ZP_03240300.1| biopolymer transport protein (exbB) [Helicobacter pylori
HPKX_438_AG0C1]
Length = 146
Score = 39.3 bits (90), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQS--IAGYYSNNVVSIPGIIESLISILL 184
++T+ L+ L + S VG+LG VLG+M F ++G + + G+ +L + L
Sbjct: 57 DLTKNLTILYVIYSNAPYVGLLGTVLGIMVIFYDMGVSGGMDAKTIMV-GLSLALKATAL 115
Query: 185 GLCVSIPSSIAYNKFIEDS 203
GL V+IP+ IAYN + S
Sbjct: 116 GLAVAIPTLIAYNSLLRKS 134
>gi|317178370|dbj|BAJ56158.1| biopolymer transport protein [Helicobacter pylori F30]
Length = 145
Score = 39.3 bits (90), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQS--IAGYYSNNVVSIPGIIESLISILL 184
++T+ L+ L + S VG+LG VLG+M F ++G + + G+ +L + L
Sbjct: 56 DLTKNLTILYVIYSNAPYVGLLGTVLGIMVIFYDMGVSGGMDAKTIMV-GLSLALKATAL 114
Query: 185 GLCVSIPSSIAYNKFIEDS 203
GL V+IP+ IAYN + S
Sbjct: 115 GLAVAIPTLIAYNSLLRKS 133
>gi|149201979|ref|ZP_01878953.1| MotA/TolQ/ExbB proton channel [Roseovarius sp. TM1035]
gi|149145027|gb|EDM33056.1| MotA/TolQ/ExbB proton channel [Roseovarius sp. TM1035]
Length = 219
Score = 39.3 bits (90), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 47/87 (54%), Gaps = 3/87 (3%)
Query: 115 RMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSI 172
R+M A AR + FL +++ L+G+ G VLGM+ FQ++ AG + +
Sbjct: 94 RLMAEAEAR-FARLERGFRFLDTVAQVAPLLGLFGTVLGMIEAFQALQSAGAQVDPSLLA 152
Query: 173 PGIIESLISILLGLCVSIPSSIAYNKF 199
GI +L++ GL V++P+S+ + F
Sbjct: 153 GGIWVALLTTAAGLAVAMPASVVLSWF 179
>gi|15645952|ref|NP_208131.1| biopolymer transport protein (exbB) [Helicobacter pylori 26695]
gi|2314506|gb|AAD08381.1| biopolymer transport protein (exbB) [Helicobacter pylori 26695]
Length = 166
Score = 39.3 bits (90), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQS--IAGYYSNNVVSIPGIIESLISILL 184
++T+ L+ L + S VG+LG VLG+M F ++G + + G+ +L + L
Sbjct: 77 DLTKNLTILYVIFSNAPYVGLLGTVLGIMVIFYDMGVSGGMDAKTIMV-GLSLALKATAL 135
Query: 185 GLCVSIPSSIAYNKFIEDS 203
GL V+IP+ IAYN + S
Sbjct: 136 GLAVAIPTLIAYNSLLRKS 154
>gi|108563711|ref|YP_628027.1| biopolymer transport protein [Helicobacter pylori HPAG1]
gi|107837484|gb|ABF85353.1| biopolymer transport protein [Helicobacter pylori HPAG1]
Length = 166
Score = 39.3 bits (90), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQS--IAGYYSNNVVSIPGIIESLISILL 184
++T+ L+ L + S VG+LG VLG+M F ++G + + G+ +L + L
Sbjct: 77 DLTKNLTILYVIFSNAPYVGLLGTVLGIMVIFYDMGVSGGMDAKTIMV-GLSLALKATAL 135
Query: 185 GLCVSIPSSIAYNKFIEDS 203
GL V+IP+ IAYN + S
Sbjct: 136 GLAVAIPTLIAYNSLLRKS 154
>gi|315587228|gb|ADU41609.1| TonB-system energizer ExbB [Helicobacter pylori 35A]
Length = 145
Score = 39.3 bits (90), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQS--IAGYYSNNVVSIPGIIESLISILL 184
++T+ L+ L + S VG+LG VLG+M F ++G + + G+ +L + L
Sbjct: 56 DLTKNLTILYVIYSNAPYVGLLGTVLGIMVIFYDMGVSGGMDAKTIMV-GLSLALKATAL 114
Query: 185 GLCVSIPSSIAYNKFIEDS 203
GL V+IP+ IAYN + S
Sbjct: 115 GLAVAIPTLIAYNSLLRKS 133
>gi|260494914|ref|ZP_05815043.1| biopolymer transport exbB protein [Fusobacterium sp. 3_1_33]
gi|260197357|gb|EEW94875.1| biopolymer transport exbB protein [Fusobacterium sp. 3_1_33]
Length = 203
Score = 39.3 bits (90), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 82/176 (46%), Gaps = 18/176 (10%)
Query: 27 IITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVC--KSLKNHHNIGL 84
II L I S+ +I +++ NF L E +QL G+ E + S K+ ++ L
Sbjct: 19 IIGLYAILERFSYFLIKERN-NFSKLPS---EVKQLINEGKIKEAIVALNSNKSSTSLVL 74
Query: 85 AAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLL 144
I + E K++ + G + I+R ++ + + L +++A L
Sbjct: 75 KEILIYGYKENKETLS--SLEEKGKEKAIER---------IKSLERNMWLLSLVANASPL 123
Query: 145 VGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKF 199
+G+LG V GM+ F SIA + + V GI E+L + GL V+IP I YN F
Sbjct: 124 LGLLGTVTGMIKAFNSIALNGTGDAGVLAKGISEALYTTAGGLIVAIPCMIFYNYF 179
>gi|308183448|ref|YP_003927575.1| biopolymer transport protein [Helicobacter pylori PeCan4]
gi|308065633|gb|ADO07525.1| biopolymer transport protein [Helicobacter pylori PeCan4]
Length = 145
Score = 39.3 bits (90), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQS--IAGYYSNNVVSIPGIIESLISILL 184
++T+ L+ L + S VG+LG VLG+M F ++G + + G+ +L + L
Sbjct: 56 DLTKNLTILYVIYSNAPYVGLLGTVLGIMVIFYDMGVSGGMDAKTIMV-GLSLALKATAL 114
Query: 185 GLCVSIPSSIAYNKFIEDS 203
GL V+IP+ IAYN + S
Sbjct: 115 GLAVAIPTLIAYNSLLRKS 133
>gi|152996172|ref|YP_001341007.1| MotA/TolQ/ExbB proton channel [Marinomonas sp. MWYL1]
gi|150837096|gb|ABR71072.1| MotA/TolQ/ExbB proton channel [Marinomonas sp. MWYL1]
Length = 208
Score = 39.3 bits (90), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 88/192 (45%), Gaps = 38/192 (19%)
Query: 35 SILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHH-----------NIG 83
SIL+ ++II++ F TLR+ + L L V L++ G
Sbjct: 19 SILALAIIIER---FWTLRKAGVAPKGL------LSDVMARLRDDRMTIEYIRSMQAKTG 69
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
LA+IF + + K +GA + + A + + E+ ++ LG++++
Sbjct: 70 LASIFAAGLLNSKHG--RGA---------MKESVQEAASHVIHELERFMNTLGTIAAISP 118
Query: 144 LVGILGAVLGMMGFF----QSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKF 199
L+G+LG V+GM+ F +S AG N + GI E+L++ GL V+IP+ I + F
Sbjct: 119 LLGLLGTVVGMIKVFSVLMESGAG---NTALLAGGISEALLTTAAGLGVAIPALIFHRFF 175
Query: 200 IEDSKKFAMQME 211
+ + ME
Sbjct: 176 SRRIDELVVTME 187
>gi|254473807|ref|ZP_05087202.1| MotA/TolQ/ExbB proton channel [Pseudovibrio sp. JE062]
gi|211957193|gb|EEA92398.1| MotA/TolQ/ExbB proton channel [Pseudovibrio sp. JE062]
Length = 244
Score = 39.3 bits (90), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLIS 181
L ++ L L ++ L+G+ G VLGM+G FQ++ AG + GI +L++
Sbjct: 118 HLGDLRSYLRALDMIAQIAPLLGLFGTVLGMIGAFQAMADAGSQVDPSTLAGGIWVALLT 177
Query: 182 ILLGLCVSIPSSIAYNKF 199
+GL V+IP+S+ + F
Sbjct: 178 TAVGLAVAIPASVMLSLF 195
>gi|308273717|emb|CBX30319.1| hypothetical protein N47_D31280 [uncultured Desulfobacterium sp.]
Length = 147
Score = 39.3 bits (90), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 50/133 (37%), Gaps = 17/133 (12%)
Query: 47 VNFITLRRQFRE---FEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKK------ 97
+ + LRR F+E F FW + V K LA IF +E K
Sbjct: 1 MKYKYLRRAFKESEAFTDYFWRCRDFSDVYAKSKELTGSPLARIFRIGYAELAKLSQSGV 60
Query: 98 --------SCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILG 149
S D S D + R + AI E+ +T+ + FL + + +G+ G
Sbjct: 61 SISSMSSESEDVTISSRFAGMDNVKRALRRAINSEITGLTQLVPFLATTGNTSPFIGLFG 120
Query: 150 AVLGMMGFFQSIA 162
V G+M F I
Sbjct: 121 TVWGIMNSFHGIG 133
>gi|301166334|emb|CBW25910.1| putative biopolymer transport protein [Bacteriovorax marinus SJ]
Length = 197
Score = 39.3 bits (90), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 82/178 (46%), Gaps = 18/178 (10%)
Query: 27 IITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAA 86
I+ L + S+L W V +K + F+ + ++ + +F GQ+L K K H GL+
Sbjct: 11 IMYPLLLCSLLVWFVTFEK-IRFLNNLK--KDIDLMFIKGQAL---LKENKIHEAKGLSH 64
Query: 87 IFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLS----FLGSMSSAG 142
+S + + ++ + + R L E + L +G++ S+
Sbjct: 65 SIHPLLSTPYLTLFES-------EELTREQWSMRLGRRLIETQQGLKRSLWIIGTIGSSA 117
Query: 143 LLVGILGAVLGMMGFFQSIAGY-YSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKF 199
+G+ G V+G++ FQSIA S V G+ E+LI+ G+ V++ + I YN F
Sbjct: 118 PFIGLFGTVVGIIKSFQSIAASGKSGFAVVASGLSEALIATAAGIIVAVMAVILYNYF 175
>gi|239995809|ref|ZP_04716333.1| biopolymer transport proteins-like [Alteromonas macleodii ATCC
27126]
Length = 458
Score = 39.3 bits (90), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 144 LVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIPSSIAYNKFIED 202
L+G+LG V GM+ F+ + + S++ I G I ++L++ LGL V+IP+ I
Sbjct: 360 LLGLLGTVSGMIETFRMMTAFGSSDPEVISGGIAKALVTTELGLVVAIPALILNAVLSRK 419
Query: 203 SKKFAMQMEGFA 214
++ + ++E FA
Sbjct: 420 ARHYYEELESFA 431
>gi|192359531|ref|YP_001982256.1| MotA/TolQ/ExbB proton channel family domain-containing protein
[Cellvibrio japonicus Ueda107]
gi|190685696|gb|ACE83374.1| MotA/TolQ/ExbB proton channel family domain protein [Cellvibrio
japonicus Ueda107]
Length = 231
Score = 39.3 bits (90), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISIL 183
+ ++ ++ LG++++ L+G+LG V GM+ F +I S N V GI +L +
Sbjct: 123 IHDLERYINILGTIANVVPLMGLLGTVFGMIEVFNAIMLQGSGNTGVLAGGISVALYTTA 182
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQME 211
GL V+IP+ IA+ F + ME
Sbjct: 183 FGLLVAIPAMIAHRFFQRRIDSIVVTME 210
>gi|33285441|emb|CAD68978.1| ExbB-related protein [Photobacterium damselae subsp. piscicida]
Length = 454
Score = 39.3 bits (90), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Query: 115 RMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIP 173
R+M+ I E E + + LS L +++ ++G+LG V GM+ FQ I + + + V
Sbjct: 331 RLMETII-DEQEGLEKGLSMLKLLAALAPMLGLLGTVTGMIETFQVITQFGNGDPKVMAG 389
Query: 174 GIIESLISILLGLCVSIPSSIAYN 197
GI +L++ +LGL ++P +A+N
Sbjct: 390 GISMALVTTVLGLIAAMPLLLAHN 413
>gi|317010020|gb|ADU80600.1| biopolymer transport protein [Helicobacter pylori India7]
Length = 145
Score = 39.3 bits (90), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQS--IAGYYSNNVVSIPGIIESLISILL 184
++T+ L+ L + S VG+LG VLG+M F ++G + + G+ +L + L
Sbjct: 56 DLTKNLTILYVIYSNAPYVGLLGTVLGIMVIFYDMGVSGGMDAKTIMV-GLSLALKATAL 114
Query: 185 GLCVSIPSSIAYNKFIEDS 203
GL V+IP+ IAYN + S
Sbjct: 115 GLAVAIPTLIAYNSLLRKS 133
>gi|85703632|ref|ZP_01034736.1| MotA/TolQ/ExbB proton channel family protein [Roseovarius sp. 217]
gi|85672560|gb|EAQ27417.1| MotA/TolQ/ExbB proton channel family protein [Roseovarius sp. 217]
Length = 226
Score = 39.3 bits (90), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 62/140 (44%), Gaps = 21/140 (15%)
Query: 81 NIGLAAIFMSAMSEWKKSCDKGAR----------SPIGIQD-RIDRMMDVAIARELE--- 126
+G +A++EW + AR +P+ + D D A R LE
Sbjct: 47 GVGRHLALRAAVAEWDQGQSTAARRTLEGSRSYLAPVIARAFATDGASDSAAVRRLEAEA 106
Query: 127 -----EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESL 179
+ FL +++ L+G+ G VLGM+ FQ++ AG + + GI +L
Sbjct: 107 DARFSRLERGFRFLDTVAQVAPLLGLFGTVLGMIEAFQALQSAGSQVDPSLLAGGIWVAL 166
Query: 180 ISILLGLCVSIPSSIAYNKF 199
++ GL V++P+S+ + F
Sbjct: 167 LTTAAGLAVAMPASVVLSWF 186
>gi|291534050|emb|CBL07163.1| Biopolymer transport proteins [Megamonas hypermegale ART12/1]
Length = 222
Score = 39.3 bits (90), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 41/72 (56%)
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLC 187
+ L++L ++ + L+G+LG V+GM+ F + N + G+ E+LI+ GLC
Sbjct: 126 LKRNLNYLDTIVTMAPLLGLLGTVVGMISSFNVLDVAGDNPALITGGVGEALIATATGLC 185
Query: 188 VSIPSSIAYNKF 199
V++ + I ++ F
Sbjct: 186 VAVLALIVHSYF 197
>gi|254293842|ref|YP_003059865.1| MotA/TolQ/ExbB proton channel [Hirschia baltica ATCC 49814]
gi|254042373|gb|ACT59168.1| MotA/TolQ/ExbB proton channel [Hirschia baltica ATCC 49814]
Length = 222
Score = 39.3 bits (90), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 55/103 (53%), Gaps = 5/103 (4%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSN 167
++ I++ ++ + + L ++ L+G+ G VLGM+ F+++ AG +
Sbjct: 93 RENINKRLESEAEQAFQPFERGFRTLDMVAQLAPLLGLFGTVLGMIEAFRALQGAGSQVD 152
Query: 168 NVVSIPGIIESLISILLGLCVSIPSSIAYNKF---IEDSKKFA 207
+ GI +L++ GL V++P+SIA + F +++ ++FA
Sbjct: 153 PAILAGGIWVALMTTAAGLAVAMPTSIALSWFEAQMDNERRFA 195
>gi|237743478|ref|ZP_04573959.1| biopolymer transport exbB protein [Fusobacterium sp. 7_1]
gi|256027037|ref|ZP_05440871.1| biopolymer transport exbB protein [Fusobacterium sp. D11]
gi|289765020|ref|ZP_06524398.1| biopolymer transport exbB protein [Fusobacterium sp. D11]
gi|229433257|gb|EEO43469.1| biopolymer transport exbB protein [Fusobacterium sp. 7_1]
gi|289716575|gb|EFD80587.1| biopolymer transport exbB protein [Fusobacterium sp. D11]
Length = 203
Score = 39.3 bits (90), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 82/176 (46%), Gaps = 18/176 (10%)
Query: 27 IITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVC--KSLKNHHNIGL 84
II L I S+ +I +++ NF L E +QL G+ E + S K+ ++ L
Sbjct: 19 IIGLYAILERFSYFLIKERN-NFSKLPS---EVKQLINEGKIKEAIVALNSNKSSTSLVL 74
Query: 85 AAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLL 144
I + E K++ + G + I+R ++ + + L +++A L
Sbjct: 75 KEILIYGYKENKETLS--SLEEKGKEKAIER---------IKALERNMWLLSLVANASPL 123
Query: 145 VGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKF 199
+G+LG V GM+ F SIA + + V GI E+L + GL V+IP I YN F
Sbjct: 124 LGLLGTVTGMIKAFNSIALNGTGDAGVLAKGISEALYTTAGGLIVAIPCMIFYNYF 179
>gi|82703685|ref|YP_413251.1| MotA/TolQ/ExbB proton channel [Nitrosospira multiformis ATCC 25196]
gi|82411750|gb|ABB75859.1| outer membrane transport energization protein ExbB [Nitrosospira
multiformis ATCC 25196]
Length = 551
Score = 39.3 bits (90), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 52/108 (48%), Gaps = 1/108 (0%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV- 169
D I +D + E++ + + L S G +G+LG V+G+M F +IA NV
Sbjct: 434 DAIRASLDAGLVEEIQRMNRFMVLLTIAISGGPFIGLLGTVMGVMITFAAIAAAGDVNVN 493
Query: 170 VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEF 217
PGI +L + + G+ V+IPS YN K +M F +EF
Sbjct: 494 AIAPGIAAALAATVAGMGVAIPSLFGYNYLASRIKAIVSRMHIFVDEF 541
>gi|323497732|ref|ZP_08102747.1| putative biopolymer transport protein exbb-related protein [Vibrio
sinaloensis DSM 21326]
gi|323317208|gb|EGA70204.1| putative biopolymer transport protein exbb-related protein [Vibrio
sinaloensis DSM 21326]
Length = 448
Score = 39.3 bits (90), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 72/143 (50%), Gaps = 16/143 (11%)
Query: 97 KSCDKGARSPIG-----IQDRIDRMMDVAIARELEEITEK-------LSFLGSMSSAGLL 144
KS ++ +P+G ++++ +R + R LE I ++ LS L +++ +
Sbjct: 298 KSPNQPNDNPLGRVLSVLEEQPNRTPEALELRLLEVILDEQSHLEKGLSMLKLLAALAPM 357
Query: 145 VGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDS 203
+G+LG V GM+ FQ I + + V GI +L++ ++GL ++P +A+N +
Sbjct: 358 LGLLGTVTGMIETFQVITLFGGGDAKVMAGGISTALVTTVMGLVAAMPLLLAHNLLSTQA 417
Query: 204 KKFAMQMEGFANEFSAILSRQTE 226
+K +E + AI++ Q E
Sbjct: 418 EKLRNILE---KQGVAIVAEQAE 437
>gi|90022457|ref|YP_528284.1| biopolymer transport proteins-like protein [Saccharophagus
degradans 2-40]
gi|89952057|gb|ABD82072.1| MotA/TolQ/ExbB proton channel [Saccharophagus degradans 2-40]
Length = 464
Score = 39.3 bits (90), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 56/103 (54%), Gaps = 3/103 (2%)
Query: 114 DRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQ--SIAGYYSNNVVS 171
D ++ + + ++ + +++ + ++ L+G+LG V GM+ F+ ++ G VVS
Sbjct: 321 DDLLFMQLQQDKTTLEKRIGAIAITAAVAPLLGLLGTVSGMIETFKMMTLFGAGDPEVVS 380
Query: 172 IPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFA 214
GI ++L++ LGL V+IP+ I +K + ++E FA
Sbjct: 381 -GGIAQALVTTELGLVVAIPALILNAVLSRKAKTYYNELESFA 422
>gi|118475495|ref|YP_892777.1| TonB-system energizer ExbB [Campylobacter fetus subsp. fetus 82-40]
gi|261886317|ref|ZP_06010356.1| TonB-system energizer ExbB [Campylobacter fetus subsp. venerealis
str. Azul-94]
gi|118414721|gb|ABK83141.1| TonB-system energizer ExbB [Campylobacter fetus subsp. fetus 82-40]
Length = 145
Score = 39.3 bits (90), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 47/82 (57%), Gaps = 4/82 (4%)
Query: 123 RELEE-ITEKLSFLGSMSSAGLLVGILGAVLGMMGFF--QSIAGYYSNNVVSIPGIIESL 179
+LE+ I+E L+ L + S VG+LG V+G+M F S+AG V + G+ +L
Sbjct: 46 EDLEDSISENLTTLYIIYSNAPYVGLLGTVIGIMITFYDMSLAGNIDVKSV-VSGLSLAL 104
Query: 180 ISILLGLCVSIPSSIAYNKFIE 201
+ LGL V+IPS IAYN +
Sbjct: 105 KATALGLFVAIPSLIAYNALLR 126
>gi|262374147|ref|ZP_06067424.1| TolQ [Acinetobacter junii SH205]
gi|262311158|gb|EEY92245.1| TolQ [Acinetobacter junii SH205]
Length = 206
Score = 39.3 bits (90), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 52/99 (52%), Gaps = 3/99 (3%)
Query: 121 IARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIES 178
I+ E + + +S LG+++S VG+ G V G+ ++ +G V+ P + E+
Sbjct: 81 ISAEKSQAEKGVSVLGTIASIAPFVGLFGTVWGIFHALVAVGKSGQAGLAQVATP-VGEA 139
Query: 179 LISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEF 217
LI LGL V+IP+ +AYN + ++ A ++ A+
Sbjct: 140 LIMTGLGLAVAIPAVLAYNICVRFNRGLAHDLQDQAHSL 178
>gi|15612323|ref|NP_223976.1| biopolymer transport protein [Helicobacter pylori J99]
gi|9910670|sp|Q9ZJP6|EXBB_HELPJ RecName: Full=Biopolymer transport protein exbB
gi|4155859|gb|AAD06831.1| BIOPOLYMER TRANSPORT PROTEIN [Helicobacter pylori J99]
Length = 145
Score = 38.9 bits (89), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQS--IAGYYSNNVVSIPGIIESLISILL 184
++T+ L+ L + S VG+LG VLG+M F ++G + + G+ +L + L
Sbjct: 56 DLTKNLTILYVIFSNAPYVGLLGTVLGIMVIFYDMGVSGGMDAKTIMV-GLSLALKATAL 114
Query: 185 GLCVSIPSSIAYNKFIEDS 203
GL V+IP+ IAYN + S
Sbjct: 115 GLAVAIPTLIAYNSLLRKS 133
>gi|146281205|ref|YP_001171358.1| TonB system biopolymer transport component [Pseudomonas stutzeri
A1501]
gi|145569410|gb|ABP78516.1| TonB system biopolymer transport component [Pseudomonas stutzeri
A1501]
Length = 448
Score = 38.9 bits (89), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 46/77 (59%), Gaps = 3/77 (3%)
Query: 117 MDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPG 174
+D AI +E + L +++ L+G+LG V GM+ FQ+I +G + +++ G
Sbjct: 335 LDEAILQETPPLERGQPLLKLLAAVAPLLGLLGTVTGMIITFQAITQSGGGDSRLMAD-G 393
Query: 175 IIESLISILLGLCVSIP 191
I ++L++ +LGL V+IP
Sbjct: 394 ISQALVTTVLGLVVAIP 410
>gi|237747406|ref|ZP_04577886.1| biopolymer transporter ExbB [Oxalobacter formigenes HOxBLS]
gi|229378757|gb|EEO28848.1| biopolymer transporter ExbB [Oxalobacter formigenes HOxBLS]
Length = 202
Score = 38.9 bits (89), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 43/80 (53%)
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIP 191
L+ +G++++ L+G+ G V+GM+ F S + +N GI +L + GL +++P
Sbjct: 107 LTTIGTIATLAPLMGLFGTVVGMIEIFGSQSATGTNPAQLAHGISVALYNTGFGLLIAMP 166
Query: 192 SSIAYNKFIEDSKKFAMQME 211
+ I Y F F ++ME
Sbjct: 167 TLIFYRHFRALVTSFLIEME 186
>gi|327479358|gb|AEA82668.1| TonB system biopolymer transport component [Pseudomonas stutzeri
DSM 4166]
Length = 448
Score = 38.9 bits (89), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 46/77 (59%), Gaps = 3/77 (3%)
Query: 117 MDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPG 174
+D AI +E + L +++ L+G+LG V GM+ FQ+I +G + +++ G
Sbjct: 335 LDEAILQETPPLERGQPLLKLLAAVAPLLGLLGTVTGMIITFQAITQSGGGDSRLMAD-G 393
Query: 175 IIESLISILLGLCVSIP 191
I ++L++ +LGL V+IP
Sbjct: 394 ISQALVTTVLGLVVAIP 410
>gi|54302374|ref|YP_132367.1| putative biopolymer transport proteinexbb-related protein
[Photobacterium profundum SS9]
gi|46915796|emb|CAG22567.1| putative biopolymer transport proteinExbB-related protein
[Photobacterium profundum SS9]
Length = 455
Score = 38.9 bits (89), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Query: 115 RMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIP 173
R+++ I E + + + LS L +++ ++G+LG V GM+ FQ I + + + V
Sbjct: 341 RLLET-IVDEQQHLEKGLSMLKLLAALAPMLGLLGTVTGMIETFQVITQFGNGDPKVMAG 399
Query: 174 GIIESLISILLGLCVSIPSSIAYN 197
GI +LI+ +LGL ++P +A+N
Sbjct: 400 GISMALITTVLGLVAAMPLLLAHN 423
>gi|55247873|gb|AAV48774.1| TolR [Listonella anguillarum 775]
Length = 444
Score = 38.9 bits (89), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Query: 115 RMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIP 173
R+++ A+ E + + LS L +++ ++G+LG V GM+ FQ I + + + V
Sbjct: 325 RLLE-AVVDEQAHLEKGLSMLKLLAAIAPMLGLLGTVTGMIETFQVITQFGNGDPKVMAG 383
Query: 174 GIIESLISILLGLCVSIPSSIAYN 197
GI +L++ +LGL +IP +A+N
Sbjct: 384 GISMALVTTVLGLVSAIPLLLAHN 407
>gi|95929656|ref|ZP_01312398.1| MotA/TolQ/ExbB proton channel [Desulfuromonas acetoxidans DSM 684]
gi|95134353|gb|EAT16010.1| MotA/TolQ/ExbB proton channel [Desulfuromonas acetoxidans DSM 684]
Length = 144
Score = 38.9 bits (89), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+T +L + ++ S +G+LG VLG+M F ++ + + +I G+ +L +GL
Sbjct: 52 LTRRLHIIATIGSNAPFIGLLGTVLGIMLTFYTMGQQGAVDTHAIMTGLALALKVTAIGL 111
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQME 211
++IP+ YN I +K+ ++ E
Sbjct: 112 VIAIPTVAFYNVLIRRAKEMLLEWE 136
>gi|313893836|ref|ZP_07827402.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Veillonella sp. oral taxon 158 str. F0412]
gi|313441400|gb|EFR59826.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Veillonella sp. oral taxon 158 str. F0412]
Length = 203
Score = 38.9 bits (89), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 114 DRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP 173
+R+ DV + E + L++L M + L+G+LG V+GM+ F ++ G V
Sbjct: 92 NRLHDV-VGYMDERLKRGLNWLSMMVTMAPLLGLLGTVVGMIRSFAAVGGDIGAPTVITG 150
Query: 174 GIIESLISILLGLCVSI 190
G+ E+LI+ GL V+I
Sbjct: 151 GVSEALIATATGLSVAI 167
>gi|223939662|ref|ZP_03631536.1| MotA/TolQ/ExbB proton channel [bacterium Ellin514]
gi|223891713|gb|EEF58200.1| MotA/TolQ/ExbB proton channel [bacterium Ellin514]
Length = 208
Score = 38.9 bits (89), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 60/121 (49%), Gaps = 2/121 (1%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSN 167
++R+ ++ E+ + EKL+ L ++ L+G+LG VLG + FQSI G ++N
Sbjct: 86 RERVRESLEETGLAEVPRLEEKLNLLATLGQLAPLLGLLGTVLGFIKVFQSINSKGVFAN 145
Query: 168 NVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEG 227
GI ++LI + GL VSI AYN + + ME A E I++ +
Sbjct: 146 VQELSSGIWQALICMAAGLAVSIVCHAAYNYLVSRVNAIVLDMEKAATEIVNIVTESSAQ 205
Query: 228 N 228
N
Sbjct: 206 N 206
>gi|93006076|ref|YP_580513.1| MotA/TolQ/ExbB proton channel [Psychrobacter cryohalolentis K5]
gi|92393754|gb|ABE75029.1| MotA/TolQ/ExbB proton channel [Psychrobacter cryohalolentis K5]
Length = 213
Score = 38.9 bits (89), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Query: 114 DRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP 173
++M+ I R + + L LG+ ++ +G+ G V G+ +SI + +
Sbjct: 74 EQMLLQQIGRYRYQSEQGLPLLGTTAAIAPFIGLFGTVWGIFHALRSIGDSGQAGLAQVA 133
Query: 174 GII-ESLISILLGLCVSIPSSIAYN 197
G + E+LI LGL V+IP+ I YN
Sbjct: 134 GPVGEALIMTGLGLAVAIPAVIFYN 158
>gi|188528128|ref|YP_001910815.1| biopolymer transport protein (exbB) [Helicobacter pylori Shi470]
gi|188144368|gb|ACD48785.1| biopolymer transport protein (exbB) [Helicobacter pylori Shi470]
Length = 145
Score = 38.9 bits (89), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQS--IAGYYSNNVVSIPGIIESLISILL 184
++T+ L+ L + S VG+LG VLG+M F ++G + + G+ +L + L
Sbjct: 56 DLTKNLTILYVIYSNAPYVGLLGTVLGIMVIFYDMGVSGGMDAKTIMV-GLSLALKATAL 114
Query: 185 GLCVSIPSSIAYNKFIEDS 203
GL V+IP+ IAYN + S
Sbjct: 115 GLAVAIPTLIAYNGLLRKS 133
>gi|90414941|ref|ZP_01222904.1| putative biopolymer transport protein; ExbB-related protein
[Photobacterium profundum 3TCK]
gi|90323941|gb|EAS40539.1| putative biopolymer transport protein; ExbB-related protein
[Photobacterium profundum 3TCK]
Length = 455
Score = 38.9 bits (89), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Query: 115 RMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIP 173
R+++ I E + + + LS L +++ ++G+LG V GM+ FQ I + + + V
Sbjct: 341 RLLET-IVDEQQHLEKGLSMLKLLAALAPMLGLLGTVTGMIETFQVITQFGNGDPKVMAG 399
Query: 174 GIIESLISILLGLCVSIPSSIAYN 197
GI +LI+ +LGL ++P +A+N
Sbjct: 400 GISMALITTVLGLVAAMPLLLAHN 423
>gi|95929767|ref|ZP_01312508.1| MotA/TolQ/ExbB proton channel [Desulfuromonas acetoxidans DSM 684]
gi|95134063|gb|EAT15721.1| MotA/TolQ/ExbB proton channel [Desulfuromonas acetoxidans DSM 684]
Length = 196
Score = 38.9 bits (89), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 90/190 (47%), Gaps = 30/190 (15%)
Query: 31 LFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMS 90
L + S++ W +I K + F RR E++ SL+ ++L IG
Sbjct: 22 LLVSSLVMWLMIFYKGLLFFQARR-----EEV-----SLKQCRQALIEQRYIG------- 64
Query: 91 AMSEWKKSCDKGARSPIGIQDR--IDRMMDVAIARELEEITEKLSFLGS---MSSAGLLV 145
+ W+++ R I +++ +DR D + + + E F+G+ ++SA L+
Sbjct: 65 --AFWQQNI---LRQFIWLREHQSLDR--DHLLQLQQRQSNEVDRFIGTILVLASAAPLM 117
Query: 146 GILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCVSIPSSIAYNKFIEDSK 204
G+LG V GM+ F I+ + + N ++ GI E+LI+ GL V++P I ++
Sbjct: 118 GLLGTVSGMITTFNVISVFGTGNARAMAAGISEALITTQAGLVVAVPGLILGALLYRRAE 177
Query: 205 KFAMQMEGFA 214
+ +M+ F+
Sbjct: 178 QMKERMQRFS 187
>gi|307638012|gb|ADN80462.1| Biopolymer transport protein [Helicobacter pylori 908]
gi|325996615|gb|ADZ52020.1| Ferric siderophore transport system/ biopolymer transport protein
[Helicobacter pylori 2018]
gi|325998205|gb|ADZ50413.1| Biopolymer transport protein [Helicobacter pylori 2017]
Length = 145
Score = 38.9 bits (89), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILL 184
++T+ L+ L + S VG+LG VLG+M F + +G + + G+ +L + L
Sbjct: 56 DLTKNLTILYVIYSNAPYVGLLGTVLGIMVIFYDMGMSGGMDAKTIMV-GLSLALKATAL 114
Query: 185 GLCVSIPSSIAYNKFIEDS 203
GL V+IP+ IAYN + S
Sbjct: 115 GLAVAIPTLIAYNSLLRKS 133
>gi|154253330|ref|YP_001414154.1| MotA/TolQ/ExbB proton channel [Parvibaculum lavamentivorans DS-1]
gi|154157280|gb|ABS64497.1| MotA/TolQ/ExbB proton channel [Parvibaculum lavamentivorans DS-1]
Length = 257
Score = 38.9 bits (89), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 96/206 (46%), Gaps = 19/206 (9%)
Query: 27 IITLLFIFSILSWSVIIQKSVNFITL---RRQFREFEQLFWSGQSLETVCKSLKNHHNIG 83
I+ +L + S++S ++I+ K F + +R F E L + + LK
Sbjct: 54 IVAILLVLSVISAAIILLKIFQFWSAGLSKRAFVEPALDKIESGDLASSLEVLKKQRTP- 112
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
AM+ ++ +G + I R+ + I L+ L +G++S
Sbjct: 113 ----LARAMAAGVRAKMRGDLRDEDVASEIVRVGTMEIG-SLQRYLRWLEVIGNISP--- 164
Query: 144 LVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIE 201
L+G+LG V+GM+ FQS+ AG + + GI +L++ +GL V++P+ A N +E
Sbjct: 165 LLGLLGTVIGMINAFQSLEEAGTQVDPALLSGGIWVALLTTAVGLIVALPAITALN-LLE 223
Query: 202 ---DSKKFAMQMEGFANEFSAILSRQ 224
D + +M+ + A +A+ +RQ
Sbjct: 224 GKIDQVRLSMR-DASARVIAALHARQ 248
>gi|9911067|sp|O25897|EXBB_HELPY RecName: Full=Biopolymer transport protein exbB
Length = 145
Score = 38.9 bits (89), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQS--IAGYYSNNVVSIPGIIESLISILL 184
++T+ L+ L + S VG+LG VLG+M F ++G + + G+ +L + L
Sbjct: 56 DLTKNLTILYVIFSNAPYVGLLGTVLGIMVIFYDMGVSGGMDAKTIMV-GLSLALKATAL 114
Query: 185 GLCVSIPSSIAYNKFIEDS 203
GL V+IP+ IAYN + S
Sbjct: 115 GLAVAIPTLIAYNSLLRKS 133
>gi|160899009|ref|YP_001564591.1| MotA/TolQ/ExbB proton channel [Delftia acidovorans SPH-1]
gi|160364593|gb|ABX36206.1| MotA/TolQ/ExbB proton channel [Delftia acidovorans SPH-1]
Length = 210
Score = 38.9 bits (89), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 57/122 (46%), Gaps = 4/122 (3%)
Query: 106 PIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYY 165
P ++ + M+ A + + LS L +++SA L+G+LG V+GM+ F S G
Sbjct: 85 PDSSEEELRASMEGAGRAAAHTLEKHLSALATIASAAPLLGLLGTVIGMIEIFGSQGGAS 144
Query: 166 S----NNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+ N GI +L + GL V+IP+ I + F + + ME + +F L
Sbjct: 145 ATGGGNPAQLAAGISIALYNTAFGLIVAIPALIFWRYFRARVDGYLLGMELASEQFVRHL 204
Query: 222 SR 223
R
Sbjct: 205 VR 206
>gi|315453622|ref|YP_004073892.1| TonB-system energizer ExbB [Helicobacter felis ATCC 49179]
gi|315132674|emb|CBY83302.1| TonB-system energizer ExbB [Helicobacter felis ATCC 49179]
Length = 156
Score = 38.9 bits (89), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 50/92 (54%), Gaps = 2/92 (2%)
Query: 115 RMMDVAIARELE-EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI- 172
R+ D R+LE ++ +L+ + ++ S +G+LG V G+M F + S + +I
Sbjct: 40 RVDDYNDKRKLELDLHRRLTLVATIGSNAPYIGLLGTVTGIMITFIELGSTGSVDTKAIM 99
Query: 173 PGIIESLISILLGLCVSIPSSIAYNKFIEDSK 204
G+ +L + +GL V+IPS + YN + S+
Sbjct: 100 VGLALALKATGMGLIVAIPSVVIYNMLVRKSE 131
>gi|308064115|gb|ADO06002.1| biopolymer transport protein [Helicobacter pylori Sat464]
Length = 145
Score = 38.9 bits (89), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQS--IAGYYSNNVVSIPGIIESLISILL 184
++T+ L+ L + S VG+LG VLG+M F ++G + + G+ +L + L
Sbjct: 56 DLTKNLTILYVIYSNAPYVGLLGTVLGIMVIFYDMGVSGGMDAKTIMV-GLSLALKATAL 114
Query: 185 GLCVSIPSSIAYNKFIEDS 203
GL V+IP+ IAYN + S
Sbjct: 115 GLAVAIPTLIAYNGLLRKS 133
>gi|300871889|ref|YP_003786762.1| biopolymer transport protein ExbB [Brachyspira pilosicoli 95/1000]
gi|300689590|gb|ADK32261.1| biopolymer transport protein, ExbB [Brachyspira pilosicoli 95/1000]
Length = 209
Score = 38.9 bits (89), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 60/105 (57%), Gaps = 1/105 (0%)
Query: 123 RELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLIS 181
+EL ++ +S L ++S+ L+G+LG +LGM+ F +A S N +++ GI +L++
Sbjct: 105 KELPKLERFISTLSTISTVAPLLGLLGTILGMIQSFGVMASVGSGNPIALASGIANALLT 164
Query: 182 ILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
GL ++IP+ + YN F+ ME +NE S LS++ +
Sbjct: 165 TAAGLVIAIPTVVFYNYFVNALNSRISFMENVSNEISDYLSKKDK 209
>gi|207109138|ref|ZP_03243300.1| biopolymer transport protein (exbB) [Helicobacter pylori
HPKX_438_CA4C1]
Length = 143
Score = 38.9 bits (89), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 44/80 (55%), Gaps = 3/80 (3%)
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQS--IAGYYSNNVVSIPGIIESLISILL 184
++T+ L+ L + S VG+LG VLG+M F ++G + + G+ +L + L
Sbjct: 57 DLTKNLTILYVIYSNAPYVGLLGTVLGIMVIFYDMGVSGGMDAKTIMV-GLSLALKATAL 115
Query: 185 GLCVSIPSSIAYNKFIEDSK 204
GL V+IP+ IAYN + S
Sbjct: 116 GLAVAIPTLIAYNSLLRKSD 135
>gi|317487046|ref|ZP_07945854.1| MotA/TolQ/ExbB proton channel family protein [Bilophila wadsworthia
3_1_6]
gi|316921728|gb|EFV43006.1| MotA/TolQ/ExbB proton channel family protein [Bilophila wadsworthia
3_1_6]
Length = 212
Score = 38.9 bits (89), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 57/99 (57%), Gaps = 3/99 (3%)
Query: 123 RELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLIS 181
R E++T+ L +L +S L+G+LG +LGM+ F++IA + N + GI E+LI+
Sbjct: 96 RNFEQVTKGLCWLRLISVVSPLLGLLGTILGMVTVFRTIAENSAPNAAQLAAGIWEALIT 155
Query: 182 ILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAI 220
++GLCV+IP + Y + K F +E + + A+
Sbjct: 156 TIMGLCVAIPMLMFYYYLMLKFKGF--HIEAVEHSYRAL 192
>gi|303229070|ref|ZP_07315876.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Veillonella atypica ACS-134-V-Col7a]
gi|303230886|ref|ZP_07317630.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Veillonella atypica ACS-049-V-Sch6]
gi|302514399|gb|EFL56397.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Veillonella atypica ACS-049-V-Sch6]
gi|302516281|gb|EFL58217.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Veillonella atypica ACS-134-V-Col7a]
Length = 203
Score = 38.9 bits (89), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 114 DRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP 173
+R+ DV + E + L++L M + L+G+LG V+GM+ F ++ G V
Sbjct: 92 NRLHDV-VGYMDERLKRGLNWLSMMVTMAPLLGLLGTVVGMIRSFAAVGGDIGAPTVITG 150
Query: 174 GIIESLISILLGLCVSI 190
G+ E+LI+ GL V+I
Sbjct: 151 GVSEALIATATGLSVAI 167
>gi|149198874|ref|ZP_01875916.1| putative tolQ-type transport protein [Lentisphaera araneosa
HTCC2155]
gi|149138072|gb|EDM26483.1| putative tolQ-type transport protein [Lentisphaera araneosa
HTCC2155]
Length = 257
Score = 38.9 bits (89), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 58/120 (48%), Gaps = 23/120 (19%)
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
LA I ++A + + D IQD + D+ E E+I +++++L G
Sbjct: 113 LANILLAAFANIAEGYDV-------IQDSVSSAADL----ENEKILQRINYLNVFGQMGP 161
Query: 144 LVGILGAVLGMMGFFQSIA-------GYYSNNVVSIPGIIESLISILLGLCVSIPSSIAY 196
++G+LG V GM+G F +A + N +SI +L + + GL +SIP+ + Y
Sbjct: 162 MLGLLGTVSGMVGAFAGLANKTGAAKATFLANQISI-----ALWTTVAGLLISIPALLGY 216
>gi|254510099|ref|ZP_05122166.1| MotA/TolQ/ExbB proton channel family domain protein
[Rhodobacteraceae bacterium KLH11]
gi|221533810|gb|EEE36798.1| MotA/TolQ/ExbB proton channel family domain protein
[Rhodobacteraceae bacterium KLH11]
Length = 220
Score = 38.9 bits (89), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 46/89 (51%), Gaps = 2/89 (2%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVV 170
+D +D L ++ L +++ L+G+ G VLGM+ FQS+ AG + +
Sbjct: 92 LDARLDAEAGLALAKLERGFRLLDTVAQIAPLLGLFGTVLGMIDAFQSLQSAGSSVDPSL 151
Query: 171 SIPGIIESLISILLGLCVSIPSSIAYNKF 199
GI +L++ GL V++P+S+ + F
Sbjct: 152 LAGGIWVALVTTAAGLAVAMPTSMVLSWF 180
>gi|294793299|ref|ZP_06758445.1| biopolymer transport protein [Veillonella sp. 6_1_27]
gi|294794670|ref|ZP_06759805.1| biopolymer transport protein [Veillonella sp. 3_1_44]
gi|294454032|gb|EFG22406.1| biopolymer transport protein [Veillonella sp. 3_1_44]
gi|294456244|gb|EFG24608.1| biopolymer transport protein [Veillonella sp. 6_1_27]
Length = 204
Score = 38.5 bits (88), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 35/163 (21%), Positives = 77/163 (47%), Gaps = 16/163 (9%)
Query: 31 LFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS---LETVCKSLKNHHNIGLAAI 87
L +F + + +++ ++ + + + ++ +G++ T+ S+KN +
Sbjct: 19 LVLFMLAACTILFERIRTYRNINHELQQLSDSIDAGRNSNNWSTLENSIKNSDD------ 72
Query: 88 FMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGI 147
A+S + + S G+++R+ DV + E + L++L M + L+G+
Sbjct: 73 ---ALSRFVSPIVESVYSAEGLENRLH---DV-VGYMDERLKRGLNWLSMMVTMAPLLGL 125
Query: 148 LGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSI 190
LG V+GM+ F ++ G V G+ E+L++ GL V+I
Sbjct: 126 LGTVVGMIRSFAAVGGDIGAPTVITGGVSEALVATATGLSVAI 168
>gi|308062623|gb|ADO04511.1| biopolymer transport protein [Helicobacter pylori Cuz20]
Length = 145
Score = 38.5 bits (88), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILL 184
++T+ L+ L + S VG+LG VLG+M F + +G + + G+ +L + L
Sbjct: 56 DLTKNLTILYVIYSNAPYVGLLGTVLGIMVIFYDMGMSGGMDAKTIMV-GLSLALKATAL 114
Query: 185 GLCVSIPSSIAYNKFIEDS 203
GL V+IP+ IAYN + S
Sbjct: 115 GLAVAIPTLIAYNSLLRKS 133
>gi|169840466|ref|ZP_02873654.1| Biopolymer transport exbB protein [candidate division TM7
single-cell isolate TM7a]
Length = 102
Score = 38.5 bits (88), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 43/78 (55%)
Query: 134 FLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSS 193
LG++ + +G+LG V GM+ F +++ ++ + GI E+L + GL V+IPS
Sbjct: 13 LLGAVVNTAPQLGLLGTVTGMITSFSALSASAESSKIVAAGISEALYTTAFGLIVAIPSL 72
Query: 194 IAYNKFIEDSKKFAMQME 211
I YN F A++ME
Sbjct: 73 IFYNYFNRRIDAIALEME 90
>gi|118595157|ref|ZP_01552504.1| probable exbB-like biopolymer transport [Methylophilales bacterium
HTCC2181]
gi|118440935|gb|EAV47562.1| probable exbB-like biopolymer transport [Methylophilales bacterium
HTCC2181]
Length = 201
Score = 38.5 bits (88), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 50/103 (48%), Gaps = 4/103 (3%)
Query: 109 IQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN 168
I+D I+ +A R + + L FL ++S+ L+G+ G ++GM+ F S +
Sbjct: 88 IKDSIEEAGSLASFR----LEKYLGFLSTISTVAPLLGLFGTIIGMVELFSSFTSTGHDV 143
Query: 169 VVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
+ GI +L + G+ V++P+ IA+ F +ME
Sbjct: 144 SIFARGISIALYNTAGGIVVAVPAMIAFRYFRSKVDHLVNEME 186
>gi|269797127|ref|YP_003311027.1| MotA/TolQ/ExbB proton channel [Veillonella parvula DSM 2008]
gi|282849482|ref|ZP_06258867.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Veillonella parvula ATCC 17745]
gi|269093756|gb|ACZ23747.1| MotA/TolQ/ExbB proton channel [Veillonella parvula DSM 2008]
gi|282581186|gb|EFB86584.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Veillonella parvula ATCC 17745]
Length = 203
Score = 38.5 bits (88), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 35/163 (21%), Positives = 77/163 (47%), Gaps = 16/163 (9%)
Query: 31 LFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS---LETVCKSLKNHHNIGLAAI 87
L +F + + +++ ++ + + + ++ +G++ T+ S+KN +
Sbjct: 18 LVLFMLAACTILFERIRTYRNINHELQQLSDSIDAGRNSNNWSTLENSIKNSDD------ 71
Query: 88 FMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGI 147
A+S + + S G+++R+ DV + E + L++L M + L+G+
Sbjct: 72 ---ALSRFVSPIVESVYSAEGLENRLH---DV-VGYMDERLKRGLNWLSMMVTMAPLLGL 124
Query: 148 LGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSI 190
LG V+GM+ F ++ G V G+ E+L++ GL V+I
Sbjct: 125 LGTVVGMIRSFAAVGGDIGAPTVITGGVSEALVATATGLSVAI 167
>gi|114799765|ref|YP_761324.1| MotA/TolQ/ExbB proton channel family protein [Hyphomonas neptunium
ATCC 15444]
gi|114739939|gb|ABI78064.1| MotA/TolQ/ExbB proton channel family protein [Hyphomonas neptunium
ATCC 15444]
Length = 464
Score = 38.5 bits (88), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 79/183 (43%), Gaps = 28/183 (15%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+ F +Q G V +I +L I IL I L + F LF SG ++
Sbjct: 270 DLPSFGDRLQQGGQVGAVIAVLAIIGIL------------IGLYKMF----TLFTSGGAM 313
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
K+ + LA +F + E ++ D + ++ +D I RE I
Sbjct: 314 RGTAKTRQAGTGNPLARVF--EVYENNRNADV---------ETLELKLDEQILRESPRIE 362
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIE-SLISILLGLCV 188
+ +++ L+G+LG V+GM+ F +I Y + + + G I +L++ + GL
Sbjct: 363 RFNDIIKVLAAVAPLLGLLGTVVGMIITFTAITIYGAGDPKLMAGGISVALMTTVFGLVA 422
Query: 189 SIP 191
+IP
Sbjct: 423 AIP 425
>gi|187929874|ref|YP_001900361.1| MotA/TolQ/ExbB proton channel [Ralstonia pickettii 12J]
gi|187726764|gb|ACD27929.1| MotA/TolQ/ExbB proton channel [Ralstonia pickettii 12J]
Length = 206
Score = 38.5 bits (88), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 52/105 (49%), Gaps = 4/105 (3%)
Query: 121 IARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLI 180
+A LE L+ LG+++S L+G+ G V+GM+ F S +N GI +L
Sbjct: 103 VAHRLERY---LNALGTIASVAPLMGLFGTVVGMIEIFGSQTAAGTNPQALAHGISVALY 159
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEF-SAILSRQ 224
+ L L V+IP+ I + F + +++E + + AIL +
Sbjct: 160 NTALCLVVAIPTLIFWRYFRGVVDNYVVELEHLSTTYLDAILPPR 204
>gi|304320857|ref|YP_003854500.1| putative TonB system-dependent transport protein [Parvularcula
bermudensis HTCC2503]
gi|303299759|gb|ADM09358.1| putative TonB system-dependent transport protein [Parvularcula
bermudensis HTCC2503]
Length = 178
Score = 38.5 bits (88), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 56/121 (46%), Gaps = 9/121 (7%)
Query: 91 AMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGA 150
A +W++ D + I+DR AI+ ++ T + + + + L+G+LG
Sbjct: 58 AEQDWEERGDHNSWYAFAIRDR-------AISEVMQTTTANFTVIRVLIAILPLLGLLGT 110
Query: 151 VLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQ 209
V GM+ F +A S+N + GI + I + GL S+ S I FIE + ++
Sbjct: 111 VTGMVEVFDVMASTGSSNARLMAGGITRATIPTMAGLVASL-SGILLMNFIERQAAYQVR 169
Query: 210 M 210
M
Sbjct: 170 M 170
>gi|224535818|ref|ZP_03676357.1| hypothetical protein BACCELL_00682 [Bacteroides cellulosilyticus
DSM 14838]
gi|224522541|gb|EEF91646.1| hypothetical protein BACCELL_00682 [Bacteroides cellulosilyticus
DSM 14838]
Length = 237
Score = 38.5 bits (88), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 52/103 (50%), Gaps = 2/103 (1%)
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI--PGIIESLIS 181
E+ ++ + L+ + ++S ++G LG V GM+ F +A +N +++ GI E++I+
Sbjct: 134 EVAKLEKGLTIMATISGGAPMIGFLGTVTGMVRAFYEMANAGNNIDITLLSGGIYEAMIT 193
Query: 182 ILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+ GL V I + AYN + +ME F +L+
Sbjct: 194 TVGGLIVGIIAMFAYNYLVTLVDGVVNKMEAKTMAFMDLLNEP 236
>gi|189463784|ref|ZP_03012569.1| hypothetical protein BACINT_00117 [Bacteroides intestinalis DSM
17393]
gi|189438734|gb|EDV07719.1| hypothetical protein BACINT_00117 [Bacteroides intestinalis DSM
17393]
Length = 238
Score = 38.5 bits (88), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 52/103 (50%), Gaps = 2/103 (1%)
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI--PGIIESLIS 181
E+ ++ + L+ + ++S ++G LG V GM+ F +A +N +++ GI E++I+
Sbjct: 134 EVAKLEKGLTIMATISGGAPMIGFLGTVTGMVRAFYEMANAGNNIDITLLSGGIYEAMIT 193
Query: 182 ILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+ GL V I + AYN + +ME F +L+
Sbjct: 194 TVGGLIVGIIAMFAYNYLVTLVDGVVNKMEAKTMAFMDLLNEP 236
>gi|28900007|ref|NP_799662.1| biopolymer transport protein ExbB-like protein [Vibrio
parahaemolyticus RIMD 2210633]
gi|153838785|ref|ZP_01991452.1| TolR [Vibrio parahaemolyticus AQ3810]
gi|260362142|ref|ZP_05775137.1| conserved hypothetical protein [Vibrio parahaemolyticus K5030]
gi|260880586|ref|ZP_05892941.1| transporter, MotA/TolQ/ExbB proton channel family [Vibrio
parahaemolyticus AN-5034]
gi|260896327|ref|ZP_05904823.1| protein TtpC [Vibrio parahaemolyticus Peru-466]
gi|260899742|ref|ZP_05908137.1| conserved hypothetical protein [Vibrio parahaemolyticus AQ4037]
gi|28808290|dbj|BAC61495.1| biopolymer transport protein ExbB-related protein [Vibrio
parahaemolyticus RIMD 2210633]
gi|149747765|gb|EDM58659.1| TolR [Vibrio parahaemolyticus AQ3810]
gi|308085149|gb|EFO34844.1| protein TtpC [Vibrio parahaemolyticus Peru-466]
gi|308092502|gb|EFO42197.1| transporter, MotA/TolQ/ExbB proton channel family [Vibrio
parahaemolyticus AN-5034]
gi|308110437|gb|EFO47977.1| conserved hypothetical protein [Vibrio parahaemolyticus AQ4037]
gi|308114662|gb|EFO52202.1| conserved hypothetical protein [Vibrio parahaemolyticus K5030]
gi|328469992|gb|EGF40903.1| biopolymer transport protein ExbB-like protein [Vibrio
parahaemolyticus 10329]
Length = 455
Score = 38.5 bits (88), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Query: 115 RMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIP 173
R+++ A+ E + + LS L +++ ++G+LG V GM+ FQ I + + + V
Sbjct: 329 RLLE-AVVDEQTHLEKGLSMLKLLAALAPMLGLLGTVTGMIETFQVITQFGNGDPKVMAG 387
Query: 174 GIIESLISILLGLCVSIPSSIAYN 197
GI +L++ +LGL ++P +A+N
Sbjct: 388 GISMALVTTVLGLVAAMPLLLAHN 411
>gi|163803222|ref|ZP_02197103.1| biopolymer transport protein ExbB-related protein [Vibrio sp. AND4]
gi|159172977|gb|EDP57813.1| biopolymer transport protein ExbB-related protein [Vibrio sp. AND4]
Length = 455
Score = 38.5 bits (88), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 120 AIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIES 178
A+ E + + LS L +++ ++G+LG V GM+ FQ I + + + V GI +
Sbjct: 333 AVVDEQTHLEKGLSMLKLLAALAPMLGLLGTVTGMIETFQVITQFGNGDPKVMAGGISMA 392
Query: 179 LISILLGLCVSIPSSIAYN 197
L++ +LGL ++P +A+N
Sbjct: 393 LVTTVLGLVAAMPLLLAHN 411
>gi|294339570|emb|CAZ87929.1| putative MotA/TolQ/ExbB proton channel [Thiomonas sp. 3As]
Length = 238
Score = 38.5 bits (88), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 32/151 (21%), Positives = 66/151 (43%), Gaps = 21/151 (13%)
Query: 74 KSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSP------IGIQ----DRIDRMMDV---A 120
+ LK+H ++ + + K D A SP + +Q D +D D A
Sbjct: 50 RELKSHAHVDV--------KQLKAKVDDDADSPAAQVVAVALQHDLADPLDHFTDRLEEA 101
Query: 121 IARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLI 180
+ + I L L ++ + L+G+LG ++GM F +++ + G+ E+L+
Sbjct: 102 VMDQAPRIDRGLWMLDTIVTLAPLLGLLGTIIGMFNTFSALSNPGAATQAVTGGVGEALL 161
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
+ GL +++ +A+N + + Q+E
Sbjct: 162 ATAAGLFIAVLGLVAFNALNQRVRLVMHQLE 192
>gi|223939298|ref|ZP_03631178.1| MotA/TolQ/ExbB proton channel [bacterium Ellin514]
gi|223892011|gb|EEF58492.1| MotA/TolQ/ExbB proton channel [bacterium Ellin514]
Length = 211
Score = 38.5 bits (88), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 144 LVGILGAVLGMMGFFQSIA-GYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIED 202
L+G++G + GMM F ++ ++N GI L ++GL ++IPS IA++ + +
Sbjct: 115 LLGLVGTIHGMMTLFGGLSQSSLADNTALAQGISLILNFTMMGLLIAIPSLIAWSYYSKK 174
Query: 203 SKKFAMQMEGFANEF 217
+ A++ME EF
Sbjct: 175 VEMLAVEMETVCEEF 189
>gi|253998349|ref|YP_003050412.1| MotA/TolQ/ExbB proton channel [Methylovorus sp. SIP3-4]
gi|313200423|ref|YP_004039081.1| mota/tolq/exbb proton channel [Methylovorus sp. MP688]
gi|253985028|gb|ACT49885.1| MotA/TolQ/ExbB proton channel [Methylovorus sp. SIP3-4]
gi|312439739|gb|ADQ83845.1| MotA/TolQ/ExbB proton channel [Methylovorus sp. MP688]
Length = 201
Score = 38.5 bits (88), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 74/151 (49%), Gaps = 17/151 (11%)
Query: 64 WSGQ---SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVA 120
W GQ + ET+ K L+ H +G IF SA++ S + +++ I+ A
Sbjct: 50 WLGQGGVNKETLIK-LQQHSLLG--QIFASALANVDSSREV-------MKEAIEES-GRA 98
Query: 121 IARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLI 180
+A +LE+ L+ LG++++ L+G+LG V+GM+ F + + GI +L
Sbjct: 99 VAHKLEKY---LTTLGTIATVSPLLGLLGTVIGMVELFGAFTATGHDVAQFARGISVALY 155
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
+ G+ V++P+ I Y F ++ME
Sbjct: 156 NTAGGIVVAVPAMIFYRYFRGKVDGLIVEME 186
>gi|153834893|ref|ZP_01987560.1| TolR [Vibrio harveyi HY01]
gi|148868664|gb|EDL67746.1| TolR [Vibrio harveyi HY01]
Length = 455
Score = 38.5 bits (88), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 120 AIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIES 178
A+ E + + LS L +++ ++G+LG V GM+ FQ I + + + V GI +
Sbjct: 333 AVVDEQTHLEKGLSMLKLLAALAPMLGLLGTVTGMIETFQVITQFGNGDPKVMAGGISMA 392
Query: 179 LISILLGLCVSIPSSIAYN 197
L++ +LGL ++P +A+N
Sbjct: 393 LVTTVLGLVAAMPLLLAHN 411
>gi|160877473|ref|YP_001556789.1| MotA/TolQ/ExbB proton channel [Shewanella baltica OS195]
gi|160862995|gb|ABX51529.1| MotA/TolQ/ExbB proton channel [Shewanella baltica OS195]
gi|315269677|gb|ADT96530.1| MotA/TolQ/ExbB proton channel [Shewanella baltica OS678]
Length = 308
Score = 38.5 bits (88), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 39/86 (45%), Gaps = 7/86 (8%)
Query: 151 VLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAM 208
V+GM+ FQ + AG N + GI E+L++ +GLCV+IP N A
Sbjct: 206 VMGMIAAFQQLQAAGNKVNPAILSGGIWEALLTTAVGLCVAIPVVALLNYLERRVDHLAH 265
Query: 209 QMEG-----FANEFSAILSRQTEGNI 229
+M+ F E SA + Q +
Sbjct: 266 EMDNLVTQLFTPELSAASTYQAPSTV 291
>gi|269961386|ref|ZP_06175751.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|269833937|gb|EEZ88031.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
Length = 455
Score = 38.5 bits (88), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 120 AIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIES 178
A+ E + + LS L +++ ++G+LG V GM+ FQ I + + + V GI +
Sbjct: 333 AVVDEQTHLEKGLSMLKLLAALAPMLGLLGTVTGMIETFQVITQFGNGDPKVMAGGISMA 392
Query: 179 LISILLGLCVSIPSSIAYN 197
L++ +LGL ++P +A+N
Sbjct: 393 LVTTVLGLVAAMPLLLAHN 411
>gi|167624642|ref|YP_001674936.1| MotA/TolQ/ExbB proton channel [Shewanella halifaxensis HAW-EB4]
gi|167354664|gb|ABZ77277.1| MotA/TolQ/ExbB proton channel [Shewanella halifaxensis HAW-EB4]
Length = 451
Score = 38.5 bits (88), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 61/130 (46%), Gaps = 13/130 (10%)
Query: 95 WKKSCDKGARSPIG-----IQDRID-------RMMDVAIARELEEITEKLSFLGSMSSAG 142
+K D +P+G QD D +D AI +E + ++S + +++
Sbjct: 306 QRKHLDNPGNNPLGRVLKAYQDNKDVDVETLELKLDEAILKETPALESRISIIKVLAAIA 365
Query: 143 LLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIE-SLISILLGLCVSIPSSIAYNKFIE 201
++G+LG V GM+ FQSI + + + + G I +L++ + GL ++P + + I
Sbjct: 366 PMMGLLGTVTGMIATFQSIQLFGTGDPKLMAGGISMALMTTVQGLVAALPLMLMHAVVIA 425
Query: 202 DSKKFAMQME 211
SK +E
Sbjct: 426 RSKSIVQILE 435
>gi|254446109|ref|ZP_05059585.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Verrucomicrobiae bacterium DG1235]
gi|198260417|gb|EDY84725.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Verrucomicrobiae bacterium DG1235]
Length = 228
Score = 38.5 bits (88), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 50/95 (52%), Gaps = 3/95 (3%)
Query: 120 AIAR-ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA--GYYSNNVVSIPGII 176
A AR E+ + L FL + A L+G+LG V G++ F +++ + GI
Sbjct: 123 AYARLEVNRMERGLVFLEIVVGAAPLLGLLGTVTGLVTVFGNVSLDTGLPEPALFTKGIA 182
Query: 177 ESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
++ + ++GL V+IP IA + F + FA+Q+E
Sbjct: 183 MAMTTTVMGLTVAIPCLIANSYFQRRVETFAVQIE 217
>gi|156977963|ref|YP_001448869.1| hypothetical protein VIBHAR_06759 [Vibrio harveyi ATCC BAA-1116]
gi|156529557|gb|ABU74642.1| hypothetical protein VIBHAR_06759 [Vibrio harveyi ATCC BAA-1116]
Length = 455
Score = 38.5 bits (88), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 120 AIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIES 178
A+ E + + LS L +++ ++G+LG V GM+ FQ I + + + V GI +
Sbjct: 333 AVVDEQTHLEKGLSMLKLLAALAPMLGLLGTVTGMIETFQVITQFGNGDPKVMAGGISMA 392
Query: 179 LISILLGLCVSIPSSIAYN 197
L++ +LGL ++P +A+N
Sbjct: 393 LVTTVLGLVAAMPLLLAHN 411
>gi|32477300|ref|NP_870294.1| tolQ-type transport protein [Rhodopirellula baltica SH 1]
gi|32447851|emb|CAD77369.1| probable tolQ-type transport protein [Rhodopirellula baltica SH 1]
Length = 319
Score = 38.5 bits (88), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 50/93 (53%), Gaps = 4/93 (4%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVS- 171
I+R A+ RE + + +L ++A L+G+LG V GM+ F + ++ S
Sbjct: 171 IERTASDALQREADRYAGPVRWLTLAAAATPLMGLLGTVWGMIVAFHESSTLTADRSRSE 230
Query: 172 --IPGIIESLISILLGLCVSIPSSIAYNKFIED 202
GI +L++ L GL V+IP++I +++E+
Sbjct: 231 QLSEGIYTALVTTLAGLAVAIPAAI-LAQYLEN 262
>gi|32476572|ref|NP_869566.1| TolQ [Rhodopirellula baltica SH 1]
gi|32447118|emb|CAD76944.1| probable TolQ [Rhodopirellula baltica SH 1]
gi|327543324|gb|EGF29756.1| MotA/TolQ/ExbB proton channel [Rhodopirellula baltica WH47]
Length = 235
Score = 38.5 bits (88), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 116 MMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGI 175
MMD + ++ +LS++ ++ + ++G+ G V GMMG F+++A ++ G
Sbjct: 101 MMDRFQRDVMSDLEYRLSWVSTVIKSAPMIGLFGTVFGMMGAFKTLATAEQVEPSALAGD 160
Query: 176 IE-SLISILLGLCVSIP 191
I+ +L++ GL ++IP
Sbjct: 161 IQVALVTTASGLAIAIP 177
>gi|113970798|ref|YP_734591.1| MotA/TolQ/ExbB proton channel [Shewanella sp. MR-4]
gi|113885482|gb|ABI39534.1| MotA/TolQ/ExbB proton channel [Shewanella sp. MR-4]
Length = 451
Score = 38.5 bits (88), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 117 MDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII 176
+D AI +E + ++S + +++ ++G+LG V GM+ FQSI + + + + G I
Sbjct: 340 LDEAILKETPALESRISIIKVLAAIAPMMGLLGTVTGMIATFQSIQLFGTGDPKLMAGGI 399
Query: 177 E-SLISILLGLCVSIP 191
+LI+ + GL ++P
Sbjct: 400 SMALITTVQGLVAALP 415
>gi|284039931|ref|YP_003389861.1| MotA/TolQ/ExbB proton channel [Spirosoma linguale DSM 74]
gi|283819224|gb|ADB41062.1| MotA/TolQ/ExbB proton channel [Spirosoma linguale DSM 74]
Length = 277
Score = 38.1 bits (87), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 50/90 (55%), Gaps = 9/90 (10%)
Query: 119 VAIARELEEIT--------EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
VA+ +E+EE T + L+ + +++S L+ +LG VLGM+ F ++ +
Sbjct: 162 VALQKEVEEATTLELPMLEKNLTIIATLASVSTLIALLGTVLGMIRAFAAMGATGQPDTG 221
Query: 171 SI-PGIIESLISILLGLCVSIPSSIAYNKF 199
++ GI E+L++ LG+ + ++I Y+ F
Sbjct: 222 ALSTGISEALVNTALGIGTAAIATIMYSYF 251
>gi|117921066|ref|YP_870258.1| MotA/TolQ/ExbB proton channel [Shewanella sp. ANA-3]
gi|117613398|gb|ABK48852.1| MotA/TolQ/ExbB proton channel [Shewanella sp. ANA-3]
Length = 451
Score = 38.1 bits (87), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 117 MDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII 176
+D AI +E + ++S + +++ ++G+LG V GM+ FQSI + + + + G I
Sbjct: 340 LDEAILKETPALESRISIIKVLAAIAPMMGLLGTVTGMIATFQSIQLFGTGDPKLMAGGI 399
Query: 177 E-SLISILLGLCVSIP 191
+LI+ + GL ++P
Sbjct: 400 SMALITTVQGLVAALP 415
>gi|153002735|ref|YP_001368416.1| MotA/TolQ/ExbB proton channel [Shewanella baltica OS185]
gi|304412055|ref|ZP_07393665.1| MotA/TolQ/ExbB proton channel [Shewanella baltica OS183]
gi|307305950|ref|ZP_07585696.1| MotA/TolQ/ExbB proton channel [Shewanella baltica BA175]
gi|151367353|gb|ABS10353.1| MotA/TolQ/ExbB proton channel [Shewanella baltica OS185]
gi|304349605|gb|EFM14013.1| MotA/TolQ/ExbB proton channel [Shewanella baltica OS183]
gi|306911443|gb|EFN41869.1| MotA/TolQ/ExbB proton channel [Shewanella baltica BA175]
Length = 308
Score = 38.1 bits (87), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 39/86 (45%), Gaps = 7/86 (8%)
Query: 151 VLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAM 208
V+GM+ FQ + AG N + GI E+L++ +GLCV+IP N A
Sbjct: 206 VMGMIAAFQQLQAAGNKVNPAILSGGIWEALLTTAVGLCVAIPVVALLNYLERRVDHLAH 265
Query: 209 QMEG-----FANEFSAILSRQTEGNI 229
+M+ F E SA + Q +
Sbjct: 266 EMDNLVTQLFTPELSAASTYQAPNTV 291
>gi|15805483|ref|NP_294179.1| biopolymer transport protein [Deinococcus radiodurans R1]
gi|6458137|gb|AAF10032.1|AE001904_8 biopolymer transport protein, putative [Deinococcus radiodurans R1]
Length = 230
Score = 38.1 bits (87), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 43/90 (47%), Gaps = 5/90 (5%)
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP---GIIESLISILLGLCV 188
LS LG+ + L+G+LG V+GM+ F + +NN GI E+LI+ GL V
Sbjct: 111 LSALGTAAQIAPLLGLLGTVVGMVRSFLVFSA--TNNPTPTELAQGISEALINTAAGLIV 168
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFS 218
+I + +A N + A Q E E
Sbjct: 169 AIVAYVARNALRNKANAVAAQAERVREELP 198
>gi|218676444|ref|YP_002395263.1| Tol R/Q protein [Vibrio splendidus LGP32]
gi|218324712|emb|CAV26340.1| Tol R/Q protein [Vibrio splendidus LGP32]
Length = 458
Score = 38.1 bits (87), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Query: 115 RMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIP 173
R+++ A+ E + + LS L +++ ++G+LG V GM+ FQ I + + + V
Sbjct: 334 RLLE-AVVDEQTHLEKGLSMLKLLAALAPMLGLLGTVTGMIETFQVITQFGNGDPKVMAG 392
Query: 174 GIIESLISILLGLCVSIPSSIAYN 197
GI +L++ +LGL ++P +A+N
Sbjct: 393 GISMALVTTVLGLVAAMPLLLAHN 416
>gi|301166671|emb|CBW26247.1| putative motility membrane protein [Bacteriovorax marinus SJ]
Length = 233
Score = 38.1 bits (87), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 23/107 (21%), Positives = 57/107 (53%), Gaps = 2/107 (1%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
+D+I +D I ++ +++S+LG +++ L+G+LG + G++ F ++A ++
Sbjct: 102 KDQIQDAVDSTILEVTPKVDKRMSYLGLVANVSTLIGLLGTIYGLIESFAAVANADPSSK 161
Query: 170 VSI--PGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFA 214
+ GI +++ + GL +I + +N S+K ++E ++
Sbjct: 162 AKLLALGISKAMNTTAFGLISAISIMVIHNILSNKSEKIIAEIEEYS 208
>gi|114048025|ref|YP_738575.1| MotA/TolQ/ExbB proton channel [Shewanella sp. MR-7]
gi|113889467|gb|ABI43518.1| MotA/TolQ/ExbB proton channel [Shewanella sp. MR-7]
Length = 451
Score = 38.1 bits (87), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 117 MDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII 176
+D AI +E + ++S + +++ ++G+LG V GM+ FQSI + + + + G I
Sbjct: 340 LDEAILKETPALESRISIIKVLAAIAPMMGLLGTVTGMIATFQSIQLFGTGDPKLMAGGI 399
Query: 177 E-SLISILLGLCVSIP 191
+LI+ + GL ++P
Sbjct: 400 SMALITTVQGLVAALP 415
>gi|86146650|ref|ZP_01064971.1| TolQ protein [Vibrio sp. MED222]
gi|85835497|gb|EAQ53634.1| TolQ protein [Vibrio sp. MED222]
Length = 458
Score = 38.1 bits (87), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Query: 115 RMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIP 173
R+++ A+ E + + LS L +++ ++G+LG V GM+ FQ I + + + V
Sbjct: 334 RLLE-AVVDEQTHLEKGLSMLKLLAALAPMLGLLGTVTGMIETFQVITQFGNGDPKVMAG 392
Query: 174 GIIESLISILLGLCVSIPSSIAYN 197
GI +L++ +LGL ++P +A+N
Sbjct: 393 GISMALVTTVLGLVAAMPLLLAHN 416
>gi|260428635|ref|ZP_05782614.1| MotA/TolQ/ExbB proton channel [Citreicella sp. SE45]
gi|260423127|gb|EEX16378.1| MotA/TolQ/ExbB proton channel [Citreicella sp. SE45]
Length = 218
Score = 38.1 bits (87), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 41/68 (60%), Gaps = 2/68 (2%)
Query: 134 FLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGLCVSIP 191
FL S++ L+G+ G VLGM+ FQ++ AG + + GI +L++ +GL V++P
Sbjct: 112 FLDSVAQLSPLLGLFGTVLGMISAFQALQDAGSQVDPSILAGGIWVALLTTAVGLAVAMP 171
Query: 192 SSIAYNKF 199
+S+ + F
Sbjct: 172 TSLILSWF 179
>gi|308062708|gb|ADO04596.1| biopolymer transport protein [Helicobacter pylori Cuz20]
Length = 150
Score = 38.1 bits (87), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 56/113 (49%), Gaps = 11/113 (9%)
Query: 112 RIDRMMDVAIARELE-EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
R+D D R+LE + ++L+ + ++ S +G+LG V+G+M F + S + +
Sbjct: 35 RVDDYTD---RRKLELALHKRLTLVATIGSNAPYIGLLGTVMGIMLTFMDLG---SASGI 88
Query: 171 SIPGIIESLISIL----LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
I+ +L L +GL V+IP+ + YN + S+ + + F + A
Sbjct: 89 DTKAIMTNLALALKATGMGLLVAIPAIVIYNLLVRKSEILVTKWDIFHHPVDA 141
>gi|94500769|ref|ZP_01307298.1| TonB system biopolymer transport component [Oceanobacter sp. RED65]
gi|94427091|gb|EAT12072.1| TonB system biopolymer transport component [Oceanobacter sp. RED65]
Length = 461
Score = 38.1 bits (87), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
Query: 120 AIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIES 178
AI+ E+ +T ++++ +S L+G+LG V GM+ F++++ + + + + GI ++
Sbjct: 349 AISNEVPRLTAGVNWIKIISVVAPLLGLLGTVTGMIDVFETMSLFGTGDPKLMAGGISQA 408
Query: 179 LISILLGLCVSIP 191
L++ +LGL +IP
Sbjct: 409 LVTTVLGLVAAIP 421
>gi|329957266|ref|ZP_08297786.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Bacteroides clarus YIT 12056]
gi|328522979|gb|EGF50082.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Bacteroides clarus YIT 12056]
Length = 238
Score = 38.1 bits (87), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 53/105 (50%), Gaps = 2/105 (1%)
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI--PGIIESLIS 181
E+ ++ + L+ + ++S ++G LG V GM+ F +A +N +++ GI E++I+
Sbjct: 134 EVAKLEKGLTIMATISGGAPMIGFLGTVTGMVRAFFEMANAGNNIDITLLSGGIYEAMIT 193
Query: 182 ILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+ GL V I + AYN + +ME F +L+ +
Sbjct: 194 TVGGLIVGIIAMFAYNYLVTLVDGVVNKMEAKTMAFMDLLNEPAK 238
>gi|317181128|dbj|BAJ58914.1| biopolymer transport protein [Helicobacter pylori F32]
Length = 150
Score = 38.1 bits (87), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 56/113 (49%), Gaps = 11/113 (9%)
Query: 112 RIDRMMDVAIARELE-EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
R+D D R+LE + ++L+ + ++ S +G+LG V+G+M F + S + +
Sbjct: 35 RVDDYTD---RRKLELALHKRLTLVATIGSNAPYIGLLGTVMGIMLTFMDLG---SASGI 88
Query: 171 SIPGIIESLISIL----LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
I+ +L L +GL V+IP+ + YN + S+ + + F + A
Sbjct: 89 DTKAIMTNLALALKATGMGLLVAIPAIVIYNLLVRKSEILVTKWDIFHHPVDA 141
>gi|261838720|gb|ACX98486.1| biopolymer transport accessory protein [Helicobacter pylori 51]
Length = 150
Score = 38.1 bits (87), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 56/113 (49%), Gaps = 11/113 (9%)
Query: 112 RIDRMMDVAIARELE-EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
R+D D R+LE + ++L+ + ++ S +G+LG V+G+M F + S + +
Sbjct: 35 RVDDYTD---RRKLELALHKRLTLVATIGSNAPYIGLLGTVMGIMLTFMDLG---SASGI 88
Query: 171 SIPGIIESLISIL----LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
I+ +L L +GL V+IP+ + YN + S+ + + F + A
Sbjct: 89 DTKAIMTNLALALKATGMGLLVAIPAIVIYNLLVRKSEILVTKWDIFHHPVDA 141
>gi|320104145|ref|YP_004179736.1| MotA/TolQ/ExbB proton channel [Isosphaera pallida ATCC 43644]
gi|319751427|gb|ADV63187.1| MotA/TolQ/ExbB proton channel [Isosphaera pallida ATCC 43644]
Length = 292
Score = 38.1 bits (87), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 43/73 (58%), Gaps = 11/73 (15%)
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-------GIIESL 179
E+ K+S+L + + G ++G++G +LGM+ F+ +A +V + P GI+E+L
Sbjct: 180 EMEAKISYLAVIGTLGPMIGLVGTILGMISAFRELA----TSVTAQPKPYKVAEGIMEAL 235
Query: 180 ISILLGLCVSIPS 192
L G+ +++P+
Sbjct: 236 FLTLEGVALAVPA 248
>gi|126173873|ref|YP_001050022.1| MotA/TolQ/ExbB proton channel [Shewanella baltica OS155]
gi|125997078|gb|ABN61153.1| MotA/TolQ/ExbB proton channel [Shewanella baltica OS155]
Length = 451
Score = 38.1 bits (87), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 117 MDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII 176
+D AI +E + ++S + +++ ++G+LG V GM+ FQSI + + + + G I
Sbjct: 340 LDEAILKETPALEARISIIKVLAAIAPMMGLLGTVTGMIATFQSIQLFGTGDPKLMAGGI 399
Query: 177 E-SLISILLGLCVSIP 191
+LI+ + GL ++P
Sbjct: 400 SMALITTVQGLVAALP 415
>gi|302391557|ref|YP_003827377.1| MotA/TolQ/ExbB proton channel [Acetohalobium arabaticum DSM 5501]
gi|302203634|gb|ADL12312.1| MotA/TolQ/ExbB proton channel [Acetohalobium arabaticum DSM 5501]
Length = 205
Score = 38.1 bits (87), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 63/137 (45%), Gaps = 26/137 (18%)
Query: 99 CDKGARSPIGIQDRIDRMMDVAIARELEEITEK------------------LSFLGSMSS 140
C++ + PIG ++ + + + +E EEI E+ L+F+G +S
Sbjct: 64 CEE-VKGPIG---KVLKQGILHLDKEPEEIEEQMAEVELEEFPKLEKHLGLLNFIGKISP 119
Query: 141 AGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFI 200
+ +G+LG V GM+ F ++ ++ GI E+L + GL +SIP+ AY F
Sbjct: 120 S---LGLLGTVTGMIKTFHVLSMSGKPEQLA-QGISEALTTTATGLVISIPALGAYYYFT 175
Query: 201 EDSKKFAMQMEGFANEF 217
++ A+ E E
Sbjct: 176 NKLQQIALHTEKREKEL 192
>gi|153000153|ref|YP_001365834.1| MotA/TolQ/ExbB proton channel [Shewanella baltica OS185]
gi|151364771|gb|ABS07771.1| MotA/TolQ/ExbB proton channel [Shewanella baltica OS185]
Length = 451
Score = 38.1 bits (87), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 117 MDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII 176
+D AI +E + ++S + +++ ++G+LG V GM+ FQSI + + + + G I
Sbjct: 340 LDEAILKETPALEARISIIKVLAAIAPMMGLLGTVTGMIATFQSIQLFGTGDPKLMAGGI 399
Query: 177 E-SLISILLGLCVSIP 191
+LI+ + GL ++P
Sbjct: 400 SMALITTVQGLVAALP 415
>gi|254302059|ref|ZP_04969417.1| possible biopolymer transport protein TolQ [Fusobacterium nucleatum
subsp. polymorphum ATCC 10953]
gi|148322251|gb|EDK87501.1| possible biopolymer transport protein TolQ [Fusobacterium nucleatum
subsp. polymorphum ATCC 10953]
Length = 203
Score = 38.1 bits (87), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 139 SSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYN 197
++A L+G+LG V GM+ F SIA + + V GI E+L + GL V+IP I YN
Sbjct: 118 ANASPLLGLLGTVTGMITAFNSIALNGTGDAGVLAKGISEALYTTAGGLIVAIPCMIFYN 177
Query: 198 KF 199
F
Sbjct: 178 YF 179
>gi|329943312|ref|ZP_08292086.1| motA/TolQ/ExbB proton channel family protein [Chlamydophila
psittaci Cal10]
gi|332287888|ref|YP_004422789.1| motA/TolQ/ExbB proton channel family protein [Chlamydophila
psittaci 6BC]
gi|313848460|emb|CBY17464.1| putative transport protein TolQ [Chlamydophila psittaci RD1]
gi|325506610|gb|ADZ18248.1| motA/TolQ/ExbB proton channel family protein [Chlamydophila
psittaci 6BC]
gi|328814859|gb|EGF84849.1| motA/TolQ/ExbB proton channel family protein [Chlamydophila
psittaci Cal10]
gi|328915152|gb|AEB55985.1| tolQ protein, putative [Chlamydophila psittaci 6BC]
Length = 232
Score = 38.1 bits (87), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 92/225 (40%), Gaps = 38/225 (16%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLET 71
I + + L K I L I S+ +W+V+ QK + ++++F + SG+SL+
Sbjct: 8 PIIQAYTEADLFGKGIFFSLLILSLCTWTVLHQK----LAIQKKFLK------SGKSLKD 57
Query: 72 VCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDR----MMDVAIARELEE 127
+KN H A + + E D G + +D+ D +E+
Sbjct: 58 FL--IKNRH----APLSLEIHPELNPFADLYFTIKRGTLELLDKNRQQAPDHGPVLSVED 111
Query: 128 ITEKLSFLGSMS------------------SAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
I + LG++ S +G+LG V G++ F I+
Sbjct: 112 IQSLETLLGAVMPKYRALMHENNFIPATTISLAPFLGLLGTVWGILTAFSHISSGEVGGT 171
Query: 170 VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFA 214
+ G+ +L + ++GL V+IPS I +N S + +++E A
Sbjct: 172 AMMEGLATALGTTIVGLFVAIPSLIGFNYLKAHSSRLILEIEQTA 216
>gi|114569420|ref|YP_756100.1| MotA/TolQ/ExbB proton channel [Maricaulis maris MCS10]
gi|114339882|gb|ABI65162.1| outer membrane transport energization protein ExbB [Maricaulis
maris MCS10]
Length = 462
Score = 38.1 bits (87), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 117 MDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGI 175
+D AI +E ++ L+FL + L+G+LG V GM+ F I + + + + GI
Sbjct: 350 LDEAILQETPKLEFGLNFLKLAAGIAPLLGLLGTVTGMIKTFTQITLFGTGDPRIMAGGI 409
Query: 176 IESLISILLGLCVSIP 191
E+L++ +LGL +IP
Sbjct: 410 SEALMTTVLGLIAAIP 425
>gi|27597189|dbj|BAC55123.1| probable TolR protein [Vibrio parahaemolyticus]
Length = 452
Score = 38.1 bits (87), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 120 AIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIES 178
A+ E + + LS L +++ ++G+LG V GM+ FQ I + + + V GI +
Sbjct: 330 AVVDEQTHLEKGLSMLKLLAALAPMLGLLGTVTGMIETFQVITQFGNGDPKVMAGGISMA 389
Query: 179 LISILLGLCVSIPSSIAYN 197
L++ +LGL ++P +A+N
Sbjct: 390 LVTTVLGLVAAMPLLLAHN 408
>gi|84393272|ref|ZP_00992033.1| biopolymer transport protein ExbB-related protein [Vibrio
splendidus 12B01]
gi|84376097|gb|EAP92984.1| biopolymer transport protein ExbB-related protein [Vibrio
splendidus 12B01]
Length = 458
Score = 38.1 bits (87), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Query: 115 RMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIP 173
R+++ A+ E + + LS L +++ ++G+LG V GM+ FQ I + + + V
Sbjct: 334 RLLE-AVVDEQTHLEKGLSMLKLLAALAPMLGLLGTVTGMIETFQVITQFGNGDPKVMAG 392
Query: 174 GIIESLISILLGLCVSIPSSIAYN 197
GI +L++ +LGL ++P +A+N
Sbjct: 393 GISMALVTTVLGLVAAMPLLLAHN 416
>gi|304409744|ref|ZP_07391364.1| MotA/TolQ/ExbB proton channel [Shewanella baltica OS183]
gi|307304100|ref|ZP_07583853.1| MotA/TolQ/ExbB proton channel [Shewanella baltica BA175]
gi|304352262|gb|EFM16660.1| MotA/TolQ/ExbB proton channel [Shewanella baltica OS183]
gi|306912998|gb|EFN43421.1| MotA/TolQ/ExbB proton channel [Shewanella baltica BA175]
Length = 451
Score = 38.1 bits (87), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 117 MDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII 176
+D AI +E + ++S + +++ ++G+LG V GM+ FQSI + + + + G I
Sbjct: 340 LDEAILKETPALEARISIIKVLAAIAPMMGLLGTVTGMIATFQSIQLFGTGDPKLMAGGI 399
Query: 177 E-SLISILLGLCVSIP 191
+LI+ + GL ++P
Sbjct: 400 SMALITTVQGLVAALP 415
>gi|255037802|ref|YP_003088423.1| MotA/TolQ/ExbB proton channel [Dyadobacter fermentans DSM 18053]
gi|254950558|gb|ACT95258.1| MotA/TolQ/ExbB proton channel [Dyadobacter fermentans DSM 18053]
Length = 279
Score = 38.1 bits (87), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 53/95 (55%), Gaps = 12/95 (12%)
Query: 120 AIARELEEIT--------EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVS 171
A+ +E+EE T + L+ + +++ A L+ +LG V+GM+ F ++ S + +
Sbjct: 165 ALQKEIEEATTLELPMLQKNLTIIATLAGASTLLALLGTVIGMIKAFAALGTSGSPDSAA 224
Query: 172 IP-GIIESLISILLGLCVSIPSSIAY---NKFIED 202
+ GI E+LI+ LG+ S ++I+Y N ++D
Sbjct: 225 LATGISEALINTALGIGTSAIATISYAYLNSRVDD 259
>gi|217973879|ref|YP_002358630.1| MotA/TolQ/ExbB proton channel [Shewanella baltica OS223]
gi|217499014|gb|ACK47207.1| MotA/TolQ/ExbB proton channel [Shewanella baltica OS223]
Length = 451
Score = 38.1 bits (87), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 117 MDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII 176
+D AI +E + ++S + +++ ++G+LG V GM+ FQSI + + + + G I
Sbjct: 340 LDEAILKETPALEARISIIKVLAAIAPMMGLLGTVTGMIATFQSIQLFGTGDPKLMAGGI 399
Query: 177 E-SLISILLGLCVSIP 191
+LI+ + GL ++P
Sbjct: 400 SMALITTVQGLVAALP 415
>gi|319425922|gb|ADV53996.1| TonB mediated energy transduction system, permease component, TtpC
[Shewanella putrefaciens 200]
Length = 451
Score = 38.1 bits (87), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 117 MDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII 176
+D AI +E + ++S + +++ ++G+LG V GM+ FQSI + + + + G I
Sbjct: 340 LDEAILKETPALESRISIIKVLAAIAPMMGLLGTVTGMIATFQSIQLFGTGDPKLMAGGI 399
Query: 177 E-SLISILLGLCVSIP 191
+LI+ + GL ++P
Sbjct: 400 SMALITTVQGLVAALP 415
>gi|146292618|ref|YP_001183042.1| MotA/TolQ/ExbB proton channel [Shewanella putrefaciens CN-32]
gi|145564308|gb|ABP75243.1| MotA/TolQ/ExbB proton channel [Shewanella putrefaciens CN-32]
Length = 451
Score = 38.1 bits (87), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 117 MDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII 176
+D AI +E + ++S + +++ ++G+LG V GM+ FQSI + + + + G I
Sbjct: 340 LDEAILKETPALESRISIIKVLAAIAPMMGLLGTVTGMIATFQSIQLFGTGDPKLMAGGI 399
Query: 177 E-SLISILLGLCVSIP 191
+LI+ + GL ++P
Sbjct: 400 SMALITTVQGLVAALP 415
>gi|167765302|ref|ZP_02437415.1| hypothetical protein BACSTE_03690 [Bacteroides stercoris ATCC
43183]
gi|167696930|gb|EDS13509.1| hypothetical protein BACSTE_03690 [Bacteroides stercoris ATCC
43183]
Length = 238
Score = 38.1 bits (87), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 53/105 (50%), Gaps = 2/105 (1%)
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI--PGIIESLIS 181
E+ ++ + L+ + ++S ++G LG V GM+ F +A +N +++ GI E++I+
Sbjct: 134 EVAKLEKGLTIMATISGGAPMIGFLGTVTGMVRAFFEMANAGNNIDITLLSGGIYEAMIT 193
Query: 182 ILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+ GL V I + AYN + +ME F +L+ +
Sbjct: 194 TVGGLIVGIIAMFAYNYLVTLVDGVVNKMEAKTMAFMDLLNEPAK 238
>gi|308185090|ref|YP_003929223.1| biopolymer transport protein [Helicobacter pylori SJM180]
gi|308061010|gb|ADO02906.1| biopolymer transport protein [Helicobacter pylori SJM180]
gi|317013126|gb|ADU83734.1| biopolymer transport protein [Helicobacter pylori Lithuania75]
Length = 145
Score = 38.1 bits (87), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILL 184
++T+ L+ L + S VG+LG VLG+M F + +G + + G+ +L + L
Sbjct: 56 DLTKNLTILYVIFSNAPYVGLLGTVLGIMVIFYDMGMSGGMDAKTIMV-GLSLALKATAL 114
Query: 185 GLCVSIPSSIAYNKFIEDS 203
GL V+IP+ IAYN + S
Sbjct: 115 GLAVAIPTLIAYNSLLRKS 133
>gi|148977293|ref|ZP_01813907.1| biopolymer transport protein ExbB-related protein [Vibrionales
bacterium SWAT-3]
gi|145963406|gb|EDK28670.1| biopolymer transport protein ExbB-related protein [Vibrionales
bacterium SWAT-3]
Length = 458
Score = 38.1 bits (87), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Query: 115 RMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIP 173
R+++ A+ E + + LS L +++ ++G+LG V GM+ FQ I + + + V
Sbjct: 334 RLLE-AVVDEQTHLEKGLSMLKLLAALAPMLGLLGTVTGMIETFQVITQFGNGDPKVMAG 392
Query: 174 GIIESLISILLGLCVSIPSSIAYN 197
GI +L++ +LGL ++P +A+N
Sbjct: 393 GISMALVTTVLGLVAAMPLLLAHN 416
>gi|160874780|ref|YP_001554096.1| MotA/TolQ/ExbB proton channel [Shewanella baltica OS195]
gi|160860302|gb|ABX48836.1| MotA/TolQ/ExbB proton channel [Shewanella baltica OS195]
gi|315267018|gb|ADT93871.1| MotA/TolQ/ExbB proton channel [Shewanella baltica OS678]
Length = 451
Score = 38.1 bits (87), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 117 MDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII 176
+D AI +E + ++S + +++ ++G+LG V GM+ FQSI + + + + G I
Sbjct: 340 LDEAILKETPALEARISIIKVLAAIAPMMGLLGTVTGMIATFQSIQLFGTGDPKLMAGGI 399
Query: 177 E-SLISILLGLCVSIP 191
+LI+ + GL ++P
Sbjct: 400 SMALITTVQGLVAALP 415
>gi|120599386|ref|YP_963960.1| MotA/TolQ/ExbB proton channel [Shewanella sp. W3-18-1]
gi|120559479|gb|ABM25406.1| MotA/TolQ/ExbB proton channel [Shewanella sp. W3-18-1]
Length = 451
Score = 38.1 bits (87), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 117 MDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII 176
+D AI +E + ++S + +++ ++G+LG V GM+ FQSI + + + + G I
Sbjct: 340 LDEAILKETPALESRISIIKVLAAIAPMMGLLGTVTGMIATFQSIQLFGTGDPKLMAGGI 399
Query: 177 E-SLISILLGLCVSIP 191
+LI+ + GL ++P
Sbjct: 400 SMALITTVQGLVAALP 415
>gi|53802337|ref|YP_112966.1| MotA/TolQ/ExbB proton channel family protein [Methylococcus
capsulatus str. Bath]
gi|53756098|gb|AAU90389.1| MotA/TolQ/ExbB proton channel family protein [Methylococcus
capsulatus str. Bath]
Length = 403
Score = 38.1 bits (87), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 52/96 (54%), Gaps = 1/96 (1%)
Query: 117 MDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GI 175
+D A+A E + L L +++ ++G+LG V GM+ FQ+IA + S + + GI
Sbjct: 278 VDEALAGERMRLERALGLLKLVAAIAPMLGLLGTVTGMIRTFQAIALHGSGDPRLMSGGI 337
Query: 176 IESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
E+L++ + GL +IP + ++ + ++ +E
Sbjct: 338 SEALVTTVEGLVTAIPILLLHSVLVGKAQALGTLLE 373
>gi|260424852|ref|ZP_05733478.2| MotA/TolQ/ExbB family proton channel protein [Dialister invisus DSM
15470]
gi|260403380|gb|EEW96927.1| MotA/TolQ/ExbB family proton channel protein [Dialister invisus DSM
15470]
Length = 209
Score = 38.1 bits (87), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 43/85 (50%)
Query: 117 MDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII 176
+D A + E+ L++L + + L+G+LG + GM+ FQ + GI
Sbjct: 100 LDTAYSTAAAELRAHLNYLSMIVTLSPLLGLLGTIAGMISSFQIFNLQAGQPMAITGGIG 159
Query: 177 ESLISILLGLCVSIPSSIAYNKFIE 201
E+LI+ GLCV+I + + + F +
Sbjct: 160 EALIATAAGLCVAIFALVVHTVFAQ 184
>gi|59713962|ref|YP_206737.1| TolQ protein [Vibrio fischeri ES114]
gi|59482210|gb|AAW87849.1| TolQ protein [Vibrio fischeri ES114]
Length = 450
Score = 38.1 bits (87), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Query: 115 RMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIP 173
R+++ AI E + + + LS L +++ ++G+LG V GM+ FQ I + + + V
Sbjct: 330 RLLE-AIVDEQQGLEKGLSMLKLLAALAPMLGLLGTVTGMIETFQVITQFGNGDPKVMAG 388
Query: 174 GIIESLISILLGLCVSIPSSIAYN 197
GI +L++ +LGL ++P A+N
Sbjct: 389 GISMALVTTVLGLVAAMPLLFAHN 412
>gi|327541185|gb|EGF27729.1| tolQ-type transport protein [Rhodopirellula baltica WH47]
Length = 305
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 50/93 (53%), Gaps = 4/93 (4%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVS- 171
I+R A+ RE + + +L ++A L+G+LG V GM+ F + ++ S
Sbjct: 157 IERTASDALQREADRYAGPVRWLTLAAAATPLMGLLGTVWGMIVAFHESSTLTADRSRSE 216
Query: 172 --IPGIIESLISILLGLCVSIPSSIAYNKFIED 202
GI +L++ L GL V+IP++I +++E+
Sbjct: 217 QLSEGIYTALVTTLAGLAVAIPAAI-LAQYLEN 248
>gi|254283894|ref|ZP_04958862.1| TonB system biopolymer transport component [gamma proteobacterium
NOR51-B]
gi|219680097|gb|EED36446.1| TonB system biopolymer transport component [gamma proteobacterium
NOR51-B]
Length = 461
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 117 MDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII 176
M + +E ++ L+ L +++ L+G+LG V GM+ FQ+I + + + ++ G I
Sbjct: 349 MAEGVLKETPKLESGLTLLKIIAAVAPLMGLLGTVTGMIITFQAITIFGAGDPKAMAGGI 408
Query: 177 E-SLISILLGLCVSIPS 192
+L++ +LGL V+IP+
Sbjct: 409 SGALVTTVLGLLVAIPT 425
>gi|62550951|emb|CAI79306.1| TolR protein [Aeromonas caviae]
Length = 108
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV- 169
+ ++ +D AI +E + + + +++ ++G+LG V+GM+ FQ+I + + +
Sbjct: 20 ETLELRLDEAIPQETPRMESGIGMVKVIAAIAPMLGLLGTVVGMIATFQAITLFGTGDPK 79
Query: 170 VSIPGIIESLISILLGLCVSIP 191
+ GI E+L++ + GL V++P
Sbjct: 80 LMAGGISEALVTTMQGLVVAVP 101
>gi|187734798|ref|YP_001876910.1| MotA/TolQ/ExbB proton channel [Akkermansia muciniphila ATCC
BAA-835]
gi|187424850|gb|ACD04129.1| MotA/TolQ/ExbB proton channel [Akkermansia muciniphila ATCC
BAA-835]
Length = 216
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 50/96 (52%), Gaps = 4/96 (4%)
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP---GIIESLI 180
E+ +I + + L +++ LVG+LG + G++GF+ S G S+ + ++L+
Sbjct: 99 EVFQIEKNIRGLLVVATVSPLVGVLGTIQGLVGFY-SQPGVLEGKAPSLAMSDAVYQALL 157
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANE 216
S LGL ++IP+ + Y+ S++ +E E
Sbjct: 158 SSALGLSIAIPAYLFYSYLASRSRQIVHSLERAGTE 193
>gi|261416129|ref|YP_003249812.1| MotA/TolQ/ExbB proton channel [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|261372585|gb|ACX75330.1| MotA/TolQ/ExbB proton channel [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|302327132|gb|ADL26333.1| MotA/TolQ/ExbB proton channel family protein [Fibrobacter
succinogenes subsp. succinogenes S85]
Length = 188
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+T+ L+ + +++S ++G+LG V+G+ F IA ++ + GI +L++ +LGL
Sbjct: 80 LTKGLTTVENIASISPMLGLLGTVVGIFNAFTVIAASGLDDPSAFATGIKFALVTTVLGL 139
Query: 187 CVSIPSSIAYN 197
V+IP IA+N
Sbjct: 140 VVAIPHVIAFN 150
>gi|269104635|ref|ZP_06157331.1| MotA/TolQ/ExbB proton channel family protein [Photobacterium
damselae subsp. damselae CIP 102761]
gi|268161275|gb|EEZ39772.1| MotA/TolQ/ExbB proton channel family protein [Photobacterium
damselae subsp. damselae CIP 102761]
Length = 454
Score = 37.7 bits (86), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Query: 115 RMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIP 173
R+M+ I E + + + LS L +++ ++G+LG V GM+ FQ I + + + V
Sbjct: 331 RLMETII-DEQQGLEKGLSMLKLLAALAPMLGLLGTVTGMIETFQVITQFGNGDPKVMAG 389
Query: 174 GIIESLISILLGLCVSIPSSIAYN 197
GI +L++ +LGL ++P +A+N
Sbjct: 390 GISMALVTTVLGLIAAMPLLLAHN 413
>gi|319899977|ref|YP_004159705.1| outer membrane transport energization protein ExbB [Bacteroides
helcogenes P 36-108]
gi|319415008|gb|ADV42119.1| outer membrane transport energization protein ExbB [Bacteroides
helcogenes P 36-108]
Length = 238
Score = 37.7 bits (86), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 52/105 (49%), Gaps = 2/105 (1%)
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI--PGIIESLIS 181
E+ ++ + ++ + ++S ++G LG V GM+ F +A +N +++ GI E++I+
Sbjct: 134 EVAKLEKGMTIMATISGGAPMLGFLGTVTGMVRAFWQMANAGNNIDITMLSGGIYEAMIT 193
Query: 182 ILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+ GL V I + AYN + +ME F +L+
Sbjct: 194 TVGGLVVGIAAMFAYNYLVTLIDGVVNKMEAKTMAFMDLLNEPAR 238
>gi|262369950|ref|ZP_06063277.1| conserved hypothetical protein [Acinetobacter johnsonii SH046]
gi|262314989|gb|EEY96029.1| conserved hypothetical protein [Acinetobacter johnsonii SH046]
Length = 207
Score = 37.7 bits (86), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 51/97 (52%), Gaps = 3/97 (3%)
Query: 121 IARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIES 178
I+ E + +S LG+++S VG+ G V G+ ++ +G V+ P + E+
Sbjct: 81 ISAEKANAEKGVSVLGTIASLAPFVGLFGTVWGIFHALVAVGKSGQAGLAQVATP-VGEA 139
Query: 179 LISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFAN 215
LI LGL V+IP+ +AYN ++ A +++ A+
Sbjct: 140 LIMTGLGLAVAIPAVLAYNICARVNRTLAHELQDQAH 176
>gi|254442811|ref|ZP_05056287.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Verrucomicrobiae bacterium DG1235]
gi|198257119|gb|EDY81427.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Verrucomicrobiae bacterium DG1235]
Length = 460
Score = 37.7 bits (86), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 16/87 (18%)
Query: 107 IGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYS 166
I Q +I+R+ LS + ++ L+G+LG V GM+ F+ I + +
Sbjct: 355 IATQPKIERL---------------LSVIAVTAATAPLLGLLGTVTGMINTFKLITIFGT 399
Query: 167 NNVVSIP-GIIESLISILLGLCVSIPS 192
+ S+ GI E+LI+ GL V+IPS
Sbjct: 400 GDAKSLSGGISEALITTEFGLVVAIPS 426
>gi|217975308|ref|YP_002360059.1| MotA/TolQ/ExbB proton channel [Shewanella baltica OS223]
gi|217500443|gb|ACK48636.1| MotA/TolQ/ExbB proton channel [Shewanella baltica OS223]
Length = 308
Score = 37.7 bits (86), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 39/86 (45%), Gaps = 7/86 (8%)
Query: 151 VLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAM 208
V+GM+ FQ + AG N + GI E+L++ +GLCV+IP N A
Sbjct: 206 VMGMIAAFQQLQAAGNKVNPAILSGGIWEALLTTAVGLCVAIPVVALLNYLERRVDHLAH 265
Query: 209 QMEG-----FANEFSAILSRQTEGNI 229
+M+ F E SA + Q +
Sbjct: 266 EMDNLVTQLFTPELSAASTYQAPRTV 291
>gi|290969017|ref|ZP_06560552.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Megasphaera genomosp. type_1 str. 28L]
gi|290780973|gb|EFD93566.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Megasphaera genomosp. type_1 str. 28L]
Length = 203
Score = 37.7 bits (86), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIP 191
L +L ++ + L+G+LG V GM+G F + + ++ G+ E+LI+ GLCV+I
Sbjct: 112 LDYLSAIVTISPLLGLLGTVTGMIGTFSVLDNGAGASAIT-GGVGEALIATASGLCVAIV 170
Query: 192 SSIAYNKF 199
S Y F
Sbjct: 171 SFCVYTYF 178
>gi|197336703|ref|YP_002158452.1| TolQ protein [Vibrio fischeri MJ11]
gi|197313955|gb|ACH63404.1| TolQ protein [Vibrio fischeri MJ11]
Length = 450
Score = 37.7 bits (86), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Query: 115 RMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIP 173
R+++ AI E + + + LS L +++ ++G+LG V GM+ FQ I + + + V
Sbjct: 330 RLLE-AIVDEQQGLEKGLSMLKLLAALAPMLGLLGTVTGMIETFQVITQFGNGDPKVMAG 388
Query: 174 GIIESLISILLGLCVSIPSSIAYN 197
GI +L++ +LGL ++P A+N
Sbjct: 389 GISMALVTTVLGLVAAMPLLFAHN 412
>gi|259416881|ref|ZP_05740801.1| MotA/TolQ/ExbB proton channel [Silicibacter sp. TrichCH4B]
gi|259348320|gb|EEW60097.1| MotA/TolQ/ExbB proton channel [Silicibacter sp. TrichCH4B]
Length = 226
Score = 37.7 bits (86), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 82/190 (43%), Gaps = 21/190 (11%)
Query: 27 IITLLFIFSILSWSVIIQKSVNF----ITLRRQFREFEQLFWSGQSLETVCKSLKNHHNI 82
++ LL SI+S + ++ K F + R+ + + G + +L N
Sbjct: 25 VVVLLIALSIISAATVLYKIWQFRRSGVGRHRRVSMALEAYERGDA--KTATALLAQSNS 82
Query: 83 GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAG 142
L A AMS + D+ A S DR D +V R + L FL ++
Sbjct: 83 YLVAPVQRAMS-CAEVKDRAAAS-----DRCDAEAEVLFLR----LETGLGFLDLVAQLA 132
Query: 143 LLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAY---N 197
L+G+ G VLGM+ FQ + AG + V GI +L++ GL V++P + + +
Sbjct: 133 PLIGLFGTVLGMIEAFQGLQAAGTSVDPTVLAGGIWVALLTTAAGLAVAMPVAAIHGWLS 192
Query: 198 KFIEDSKKFA 207
+E + FA
Sbjct: 193 GAVERDRVFA 202
>gi|258405774|ref|YP_003198516.1| MotA/TolQ/ExbB proton channel [Desulfohalobium retbaense DSM 5692]
gi|257798001|gb|ACV68938.1| MotA/TolQ/ExbB proton channel [Desulfohalobium retbaense DSM 5692]
Length = 480
Score = 37.7 bits (86), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISIL 183
LE L L +++ L+G+LG V GM+G FQ+I + + + GI E+L++
Sbjct: 372 LERFLPTLQVLAAIAP---LLGLLGTVTGMIGTFQTITIFGTGKPEMMAGGISEALLTTQ 428
Query: 184 LGLCVSIPSSIAYNKF 199
GL ++IP + ++ F
Sbjct: 429 FGLAIAIPLLLVHHLF 444
>gi|258622911|ref|ZP_05717927.1| biopolymer transport protein ExbB-related protein [Vibrio mimicus
VM573]
gi|258584850|gb|EEW09583.1| biopolymer transport protein ExbB-related protein [Vibrio mimicus
VM573]
Length = 696
Score = 37.7 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 120 AIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-VVSIPGIIES 178
A+ E + LS L +++ ++G+LG V GM+ FQ I + + + V GI +
Sbjct: 591 AVVDEQNHLETGLSMLKLLAALAPMLGLLGTVTGMIETFQVITQFGNGDPKVMAGGISMA 650
Query: 179 LISILLGLCVSIPSSIAYN 197
L++ + GL +IP +A+N
Sbjct: 651 LVTTVEGLIAAIPLLLAHN 669
>gi|326317449|ref|YP_004235121.1| MotA/TolQ/ExbB proton channel [Acidovorax avenae subsp. avenae ATCC
19860]
gi|323374285|gb|ADX46554.1| MotA/TolQ/ExbB proton channel [Acidovorax avenae subsp. avenae ATCC
19860]
Length = 208
Score = 37.7 bits (86), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 52/101 (51%), Gaps = 6/101 (5%)
Query: 120 AIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQS---IAGYYSNNVVSIPGII 176
AIA+ LE+ L+ L +++SA L+G+LG V+GM+ F S A N GI
Sbjct: 102 AIAQRLEKY---LNALATIASAAPLLGLLGTVIGMIEIFGSQGSSATGQGNPAQLAHGIS 158
Query: 177 ESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEF 217
+L + GL V+IP+ I + F + + +E + +F
Sbjct: 159 IALYNTAFGLIVAIPTLIFWRYFRSRVDAYLLTLELASEQF 199
>gi|209809662|ref|YP_002265201.1| Biopolymer transport protein TolR [Aliivibrio salmonicida LFI1238]
gi|208011225|emb|CAQ81658.1| Biopolymer transport protein TolR [Aliivibrio salmonicida LFI1238]
Length = 453
Score = 37.7 bits (86), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 120 AIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIES 178
AI E + + + LS L +++ ++G+LG V GM+ FQ I + + + V GI +
Sbjct: 334 AIVDEQQGLEKGLSMLKLLAALAPMLGLLGTVTGMIETFQVITQFGNGDPKVMAGGISMA 393
Query: 179 LISILLGLCVSIPSSIAYN 197
L++ +LGL ++P A+N
Sbjct: 394 LVTTVLGLVAAMPLLFAHN 412
>gi|152991166|ref|YP_001356888.1| biopolymer ExbB/TolQ family transporter [Nitratiruptor sp. SB155-2]
gi|151423027|dbj|BAF70531.1| biopolymer transport protein, ExbB/TolQ family [Nitratiruptor sp.
SB155-2]
Length = 144
Score = 37.7 bits (86), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 47/77 (61%), Gaps = 3/77 (3%)
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILL 184
+IT LS + +++S+ +G+LG VLG++ F ++ +G + + I G+ +L + +
Sbjct: 54 DITNNLSTIATIASSAPYIGLLGTVLGIILTFYTMGQSGIVNTKEIMI-GLALALKATAM 112
Query: 185 GLCVSIPSSIAYNKFIE 201
GL V+IP+++ YN +
Sbjct: 113 GLVVAIPATMFYNYLVR 129
>gi|50083746|ref|YP_045256.1| putative biopolymer transport protein (ExbB) [Acinetobacter sp.
ADP1]
gi|49529722|emb|CAG67434.1| putative biopolymer transport protein (ExbB) [Acinetobacter sp.
ADP1]
Length = 207
Score = 37.7 bits (86), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 92/205 (44%), Gaps = 34/205 (16%)
Query: 14 FALFMQMGLAV-KCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
F+++ Q AV K + +L SI +W++ I + + RQ ++ Q+ +
Sbjct: 3 FSVYWQHADAVSKTLYFVLLAMSIATWTIFILRLMG----TRQLKQ--------QAYAQL 50
Query: 73 CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKL 132
K+L + L A F E +K+ ++ + I+ E + +
Sbjct: 51 SKALSS-----LKAKFTHLTFEQRKAV-------------AEQALLRQISAEKSNAEKGV 92
Query: 133 SFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGLCVSI 190
+ LG+++S VG+ G V G+ ++ +G V+ P + E+LI LGL V+I
Sbjct: 93 AVLGTIASIAPFVGLFGTVWGIFHALVAVGKSGQAGLAQVATP-VGEALIMTGLGLAVAI 151
Query: 191 PSSIAYNKFIEDSKKFAMQMEGFAN 215
P+ +AYN + ++ A ++ A+
Sbjct: 152 PAVLAYNICVRFNRGLAHDLQDQAH 176
>gi|163751085|ref|ZP_02158315.1| MotA/TolQ/ExbB proton channel family protein [Shewanella benthica
KT99]
gi|161329041|gb|EDQ00113.1| MotA/TolQ/ExbB proton channel family protein [Shewanella benthica
KT99]
Length = 284
Score = 37.7 bits (86), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 51/96 (53%), Gaps = 1/96 (1%)
Query: 117 MDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGY-YSNNVVSIPGI 175
+D AI +E + ++S + +++ ++G+LG V GM+ FQSI + S+ + GI
Sbjct: 173 LDEAILKETPALEARISIIKVLAAIAPMMGLLGTVTGMIATFQSIQLFGTSDPKLMAGGI 232
Query: 176 IESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
+L++ + GL ++P + + I SK +E
Sbjct: 233 SMALMTTVQGLVAALPLMLMHAIVIARSKSIVQVLE 268
>gi|62185541|ref|YP_220326.1| putative transport protein TolQ [Chlamydophila abortus S26/3]
gi|62148608|emb|CAH64380.1| putative transport protein TolQ [Chlamydophila abortus S26/3]
Length = 232
Score = 37.7 bits (86), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 86/206 (41%), Gaps = 38/206 (18%)
Query: 31 LFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMS 90
L I S+ +W+V+ QK + ++++F + SG+SL+ +KN H A + +
Sbjct: 27 LLILSLCTWTVLHQK----LAIQKKFLK------SGKSLKDFL--IKNRH----APLSLE 70
Query: 91 AMSEWKKSCDKGARSPIGIQDRIDR----MMDVAIARELEEITEKLSFLGSMS------- 139
E D G + +D+ D +E+I + LG++
Sbjct: 71 IHPELNPFADLYFTIKRGTLELLDKNRQQAPDHGPVLSVEDIQSLETLLGAVMPKYRALM 130
Query: 140 -----------SAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCV 188
S +G+LG V G++ F I+ + G+ +L + ++GL V
Sbjct: 131 HENNFIPATTISLAPFLGLLGTVWGILTAFSHISSGEVGGTAMMEGLATALGTTIVGLFV 190
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFA 214
+IPS I +N S + +++E A
Sbjct: 191 AIPSLIGFNYLKAHSSRLILEIEQTA 216
>gi|32265852|ref|NP_859884.1| biopolymer transport protein [Helicobacter hepaticus ATCC 51449]
gi|32261901|gb|AAP76950.1| biopolymer transport protein [Helicobacter hepaticus ATCC 51449]
Length = 145
Score = 37.7 bits (86), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 73/142 (51%), Gaps = 14/142 (9%)
Query: 76 LKNHHNIGLAAI--FMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEK-L 132
LK++ + + AI FMS +S W SC++ + RI+ + D LEE+ K L
Sbjct: 4 LKDYIDYIIFAILGFMSFLSVWF-SCER-----LIFYMRIN-LNDYQNEEILEEVLSKNL 56
Query: 133 SFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISILLGLCVSIP 191
+ L + S VG+LG V+G+M F + + SI G+ +L + LGL V+IP
Sbjct: 57 TALYIIYSNAPYVGLLGTVIGIMITFYDMGMSGGMDAQSIMIGLSTALKATALGLVVAIP 116
Query: 192 SSIAYNKFIEDSKKFAMQMEGF 213
+ I YN F+ +K +Q+ +
Sbjct: 117 TLIVYNCFV---RKMDVQLNRY 135
>gi|154148544|ref|YP_001406442.1| TonB-system energizer ExbB [Campylobacter hominis ATCC BAA-381]
gi|153804553|gb|ABS51560.1| TonB-system energizer ExbB [Campylobacter hominis ATCC BAA-381]
Length = 140
Score = 37.7 bits (86), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISILL 184
+++T+ L+ L + S VG+LG V G+M F + + + SI G+ +L + L
Sbjct: 50 KDLTKNLTTLYIIYSNAPYVGLLGTVTGIMITFYDMGLSGNMDAKSIMLGLSLALKATAL 109
Query: 185 GLCVSIPSSIAYNKFIE 201
GLCV+IP+ + YN F+
Sbjct: 110 GLCVAIPTLMIYNAFLR 126
>gi|313893039|ref|ZP_07826616.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Veillonella sp. oral taxon 158 str. F0412]
gi|313442392|gb|EFR60807.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Veillonella sp. oral taxon 158 str. F0412]
Length = 205
Score = 37.7 bits (86), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 6/97 (6%)
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSI-AGYYSNNVVSIPGIIESLISILLGLCVSI 190
+ +L + + L+G+LG V GM+G F + AG ++ + G+ E+LI+ GLCV+I
Sbjct: 112 MDYLSATVTISPLLGLLGTVTGMIGSFSILDAGAGASAITG--GVGEALIATASGLCVAI 169
Query: 191 PSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEG 227
+ I Y F Q+EG I+S + EG
Sbjct: 170 MAFIVYTFFSHRLDSIINQIEGMCVN---IVSAKREG 203
>gi|296272614|ref|YP_003655245.1| MotA/TolQ/ExbB proton channel [Arcobacter nitrofigilis DSM 7299]
gi|296096788|gb|ADG92738.1| MotA/TolQ/ExbB proton channel [Arcobacter nitrofigilis DSM 7299]
Length = 169
Score = 37.7 bits (86), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 52/96 (54%), Gaps = 5/96 (5%)
Query: 120 AIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIE 177
I R + ++ L+ + ++S L+G+LG V+G++ F SI +G ++ S GI
Sbjct: 70 VINRRIRKLEFGLNTVKIIASIAPLLGLLGTVIGVLNSFDSITKSGLGDPSIFS-NGISI 128
Query: 178 SLISILLGLCVSIPSSIAYNKF--IEDSKKFAMQME 211
+LI+ + GL V+IP I YN I D + +Q E
Sbjct: 129 ALITTVAGLIVAIPHYIGYNYIVGILDDIELKIQKE 164
>gi|218128537|ref|ZP_03457341.1| hypothetical protein BACEGG_00107 [Bacteroides eggerthii DSM 20697]
gi|317475647|ref|ZP_07934908.1| MotA/TolQ/ExbB proton channel family protein [Bacteroides eggerthii
1_2_48FAA]
gi|217989261|gb|EEC55575.1| hypothetical protein BACEGG_00107 [Bacteroides eggerthii DSM 20697]
gi|316908217|gb|EFV29910.1| MotA/TolQ/ExbB proton channel family protein [Bacteroides eggerthii
1_2_48FAA]
Length = 238
Score = 37.7 bits (86), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 53/105 (50%), Gaps = 2/105 (1%)
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI--PGIIESLIS 181
E+ ++ + L+ + ++S ++G LG V GM+ F +A +N +++ GI E++I+
Sbjct: 134 EVAKLEKGLTIMATISGGAPMIGFLGTVTGMVRAFFEMANAGNNIDITLLSGGIYEAMIT 193
Query: 182 ILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+ GL V I + AYN + +ME F +L+ +
Sbjct: 194 TVGGLIVGIIAMFAYNYLVTLVDGVVNKMESKTMAFMDLLNEPAK 238
>gi|220934495|ref|YP_002513394.1| putative chemotaxis (motility protein A) transmembrane
[Thioalkalivibrio sp. HL-EbGR7]
gi|219995805|gb|ACL72407.1| putative chemotaxis (motility protein A) transmembrane
[Thioalkalivibrio sp. HL-EbGR7]
Length = 285
Score = 37.7 bits (86), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 71/163 (43%), Gaps = 28/163 (17%)
Query: 76 LKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFL 135
LK+HH + +S++ + G+ +P +D +MD+ + E+ E +
Sbjct: 117 LKDHHVVEF-------ISDYMRLVVSGSMNPF----ELDNLMDIELETHHHEVGEPAHAV 165
Query: 136 GSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSI---- 190
++ A GI+ AVLG++ S+ G + I G + +L+ LG+ ++
Sbjct: 166 QRVADALPAFGIVAAVLGIVNTMDSLGG----PIEEIGGKVAAALVGTFLGILLAYGFVG 221
Query: 191 PSSIAYNKFIEDSKKFA--------MQMEGFANEFSAILSRQT 225
P S A + ED KF ++G++ + + R+T
Sbjct: 222 PMSTALERRAEDEAKFYACLKACILANVQGYSPQVAVEFGRKT 264
>gi|229497110|ref|ZP_04390814.1| MotA/TolQ/ExbB proton channel family protein [Porphyromonas
endodontalis ATCC 35406]
gi|229316035|gb|EEN81964.1| MotA/TolQ/ExbB proton channel family protein [Porphyromonas
endodontalis ATCC 35406]
Length = 242
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 65/131 (49%), Gaps = 13/131 (9%)
Query: 112 RIDRMM-DVAIA------RELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGY 164
R+ R M D+++A E ++ + + +++++ ++G LG V GM+ F +A
Sbjct: 112 RLGRPMSDISVAIENAGNVEAGKLQTSMPLMATIAASAPMIGFLGTVTGMVRAFFDMANA 171
Query: 165 YSNNVVSI--PGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
S+ +S+ GI E+L++ + GL V I + AYN + K +E + EF L+
Sbjct: 172 GSSVDISLLSGGIYEALVTTVGGLIVGIITLFAYNYLVARIDKALNVLEARSIEFMDALN 231
Query: 223 R----QTEGNI 229
EGN+
Sbjct: 232 ELSGSHEEGNL 242
>gi|257093003|ref|YP_003166644.1| HAD-superfamily hydrolase [Candidatus Accumulibacter phosphatis
clade IIA str. UW-1]
gi|257045527|gb|ACV34715.1| HAD-superfamily hydrolase, subfamily IA, variant 3 [Candidatus
Accumulibacter phosphatis clade IIA str. UW-1]
Length = 224
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 53/103 (51%), Gaps = 3/103 (2%)
Query: 60 EQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDV 119
E L SG L T ++++ + I L A+ SEW ++ KG + +G +DR ++
Sbjct: 31 EVLTESGFPL-TPAQAIERYTGISLPAVLARIESEWGRNLPKGFVAHLGERDRAAFRAEL 89
Query: 120 AIARELEEITEKLSFLGSMSSAGLLVGILGA--VLGMMGFFQS 160
+ E+ +LS L ++S+G L I G+ + G++ +FQ
Sbjct: 90 QAVAGVAEMLGELSMLRCVASSGTLGKIRGSLEITGLLPYFQP 132
>gi|109946885|ref|YP_664113.1| biopolymer transport protein [Helicobacter acinonychis str. Sheeba]
gi|109714106|emb|CAJ99114.1| biopolymer transport protein [Helicobacter acinonychis str. Sheeba]
Length = 146
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLG 185
++T+ L+ L + S VG+LG VLG+M F + + +I G+ +L + LG
Sbjct: 57 DLTKNLTILYVIYSNAPYVGLLGTVLGVMVTFYDMGISEGMDAKTIMVGLSLALKATALG 116
Query: 186 LCVSIPSSIAYNKFIEDS 203
L V+IP+ IAYN + S
Sbjct: 117 LAVAIPTLIAYNGLLRKS 134
>gi|332974511|gb|EGK11432.1| TonB family auxiliary protein ExbB [Psychrobacter sp. 1501(2011)]
Length = 217
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI 172
+++++ I R E + L+ LG+ ++ +G+ G V G+ SI + +
Sbjct: 73 VEQVLLKEIGRYRFESEKGLAILGTTAAIAPFIGLFGTVWGIFHALHSIGESGQAGLSQV 132
Query: 173 PGII-ESLISILLGLCVSIPSSIAYNKFIEDSKK 205
G + E+LI LGL V+IP+ I YN + ++K
Sbjct: 133 AGPVGEALIMTGLGLAVAIPAVIFYNIAVRINRK 166
>gi|325280589|ref|YP_004253131.1| MotA/TolQ/ExbB proton channel [Odoribacter splanchnicus DSM 20712]
gi|324312398|gb|ADY32951.1| MotA/TolQ/ExbB proton channel [Odoribacter splanchnicus DSM 20712]
Length = 272
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 49/100 (49%), Gaps = 2/100 (2%)
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFF--QSIAGYYSNNVVSIPGIIESLIS 181
E+ + + LS L + + ++G LG V+GM+ F ++AG N + GI ++I+
Sbjct: 163 EVAGMEKGLSTLATCAGMAPMIGFLGTVVGMVQAFYDMAMAGNNINITLLSRGIYTAMIT 222
Query: 182 ILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+ GL V I + AYN +ME + +F ++
Sbjct: 223 TVAGLIVGIIAYFAYNALTAKIDHIVTKMETASADFMEVI 262
>gi|294141736|ref|YP_003557714.1| MotA/TolQ/ExbB proton channel family protein [Shewanella violacea
DSS12]
gi|293328205|dbj|BAJ02936.1| MotA/TolQ/ExbB proton channel family protein [Shewanella violacea
DSS12]
Length = 451
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 117 MDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGY-YSNNVVSIPGI 175
+D AI +E + ++S + +++ ++G+LG V GM+ FQSI + S+ + GI
Sbjct: 340 LDEAILKETPALEARISIIKVLAAIAPMMGLLGTVTGMIATFQSIQLFGTSDPKLMAGGI 399
Query: 176 IESLISILLGLCVSIP 191
+L++ + GL ++P
Sbjct: 400 SMALMTTVQGLVAALP 415
>gi|254227866|ref|ZP_04921296.1| Biopolymer transport proteins [Vibrio sp. Ex25]
gi|262396145|ref|YP_003287998.1| MotA/TolQ/ExbB proton channel family protein [Vibrio sp. Ex25]
gi|151939362|gb|EDN58190.1| Biopolymer transport proteins [Vibrio sp. Ex25]
gi|262339739|gb|ACY53533.1| MotA/TolQ/ExbB proton channel family protein [Vibrio sp. Ex25]
Length = 455
Score = 37.4 bits (85), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 120 AIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIES 178
A+ E + + LS L +++ ++G+LG V GM+ FQ I + + + V GI +
Sbjct: 333 AVVDEQTHLEKGLSMLKLLAALAPMLGLLGTVTGMIETFQVITQFGNGDPKVMAGGISMA 392
Query: 179 LISILLGLCVSIPSSIAYN 197
L++ +LGL ++P +A+N
Sbjct: 393 LVTTVLGLVSAMPLLLAHN 411
>gi|308048883|ref|YP_003912449.1| outer membrane transport energization protein ExbB [Ferrimonas
balearica DSM 9799]
gi|307631073|gb|ADN75375.1| outer membrane transport energization protein ExbB [Ferrimonas
balearica DSM 9799]
Length = 452
Score = 37.4 bits (85), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 117 MDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGI 175
+D AI +E I ++ + M++ ++G+LG V GM+ FQ+I + + + + GI
Sbjct: 341 IDEAILKETPRIESGVNMIKVMAAISPMLGLLGTVTGMIETFQNITLFGTGDPKIMAGGI 400
Query: 176 IESLISILLGLCVSIP 191
+L++ +LGL ++P
Sbjct: 401 SMALVTTVLGLVAALP 416
>gi|118589612|ref|ZP_01547017.1| MotA/TolQ/ExbB proton channel [Stappia aggregata IAM 12614]
gi|118437698|gb|EAV44334.1| MotA/TolQ/ExbB proton channel [Stappia aggregata IAM 12614]
Length = 240
Score = 37.4 bits (85), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 42/78 (53%), Gaps = 6/78 (7%)
Query: 144 LVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIE 201
L+G+LG VLGM+ FQ++ AG + V GI +L++ +GL V+IP S F
Sbjct: 140 LIGLLGTVLGMIEAFQAMQGAGAAVDPSVLAGGIWVALLTTAVGLSVAIPVSAIVGWF-- 197
Query: 202 DSKKFAMQ--MEGFANEF 217
DS+ A Q ME F
Sbjct: 198 DSRIEAEQSEMEALVTAF 215
>gi|294783464|ref|ZP_06748788.1| biopolymer transport ExbB protein [Fusobacterium sp. 1_1_41FAA]
gi|294480342|gb|EFG28119.1| biopolymer transport ExbB protein [Fusobacterium sp. 1_1_41FAA]
Length = 193
Score = 37.4 bits (85), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Query: 123 RELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLIS 181
+++ + + L ++A L+G+LG V GM+ F SIA + + + GI E+L +
Sbjct: 92 EQIKHLERNMWLLSLAANASPLLGLLGTVTGMITAFNSIALNGTGDAGILAKGISEALYT 151
Query: 182 ILLGLCVSIPSSIAYNKF 199
GL V+IP I YN F
Sbjct: 152 TAGGLFVAIPCMIFYNYF 169
>gi|225155104|ref|ZP_03723599.1| Biopolymer transport protein-like protein [Opitutaceae bacterium
TAV2]
gi|224804051|gb|EEG22279.1| Biopolymer transport protein-like protein [Opitutaceae bacterium
TAV2]
Length = 276
Score = 37.4 bits (85), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 79/189 (41%), Gaps = 37/189 (19%)
Query: 22 LAVKCIITLLFIFSILSWSVI----------IQKSVNFITLRRQFRE--FEQLF-WSGQS 68
L+ II L F +++ + VI + TLR+QFR+ ++ F W+ Q
Sbjct: 43 LSAPSIIPLWFCSAVIVYLVIDLYLKTAHKQCIRPAAVATLRQQFRDGAYQDAFTWTEQ- 101
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
H LA + + + SP G Q D M +AI E
Sbjct: 102 -----------HPSPLANVIHAGLRH----------SPNGKQAAEDAMA-IAIVGENTSY 139
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLC 187
++++L + ++G+ G V+GM+ F S++ + + + G I L + GL
Sbjct: 140 QNRIAYLSVIGVIAPMIGLTGTVIGMISAFASMSQAGAADPSKLSGAIGHVLHATASGLA 199
Query: 188 VSIPSSIAY 196
V+IP+ + Y
Sbjct: 200 VAIPAFVFY 208
>gi|296124040|ref|YP_003631818.1| MotA/TolQ/ExbB proton channel [Planctomyces limnophilus DSM 3776]
gi|296016380|gb|ADG69619.1| MotA/TolQ/ExbB proton channel [Planctomyces limnophilus DSM 3776]
Length = 324
Score = 37.4 bits (85), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 50/100 (50%), Gaps = 12/100 (12%)
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-----GIIESLISILL 184
+K+ +L + S ++G+LG V GM+ FQ IA ++ P GI +L + L
Sbjct: 201 QKIGYLALIGSVAPMLGLLGTVQGMVLSFQVIA---TSTQQPKPYELADGIATALFTTLE 257
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQM----EGFANEFSAI 220
GL V+IP+ +A+ + +F + EG + FS +
Sbjct: 258 GLIVAIPAIVAFTVYKNRFARFMFEASVISEGLMSRFSGM 297
>gi|71279554|ref|YP_270422.1| MotA/TolQ/ExbB proton channel family protein [Colwellia
psychrerythraea 34H]
gi|71145294|gb|AAZ25767.1| MotA/TolQ/ExbB proton channel family [Colwellia psychrerythraea
34H]
Length = 449
Score = 37.4 bits (85), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 117 MDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII 176
+D AI RE ++ ++ + ++ L+G+LG V+GM+ FQ+I + + + + G I
Sbjct: 338 LDEAILRETPKVDRGINLIKMFAAIAPLMGLLGTVIGMIMTFQTITLFGTGDPKIMAGNI 397
Query: 177 E-SLISILLGLCVSIP 191
+L++ LGL ++P
Sbjct: 398 SLALVTTALGLICALP 413
>gi|120611235|ref|YP_970913.1| MotA/TolQ/ExbB proton channel [Acidovorax citrulli AAC00-1]
gi|120589699|gb|ABM33139.1| MotA/TolQ/ExbB proton channel [Acidovorax citrulli AAC00-1]
Length = 208
Score = 37.4 bits (85), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 52/101 (51%), Gaps = 6/101 (5%)
Query: 120 AIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQS---IAGYYSNNVVSIPGII 176
A+A+ LE+ L+ L +++SA L+G+LG V+GM+ F S A N GI
Sbjct: 102 AVAQRLEKY---LNALATIASAAPLLGLLGTVIGMIEIFGSQGSSATGQGNPAQLAHGIS 158
Query: 177 ESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEF 217
+L + GL V+IP+ I + F + + +E + +F
Sbjct: 159 IALYNTAFGLIVAIPTLIFWRYFRSRVDAYLLTLELASEQF 199
>gi|301629304|ref|XP_002943783.1| PREDICTED: protein tolQ-like [Xenopus (Silurana) tropicalis]
Length = 164
Score = 37.4 bits (85), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 51/102 (50%), Gaps = 8/102 (7%)
Query: 121 IARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-----GI 175
+A LE+ L+ L +++SA L+G+LG V+GM+ F S +G P GI
Sbjct: 56 VAHRLEKY---LNALATIASAAPLLGLLGTVIGMIEIFGSQSGGGGAIGSGNPAQLAHGI 112
Query: 176 IESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEF 217
+L + GL V+IP+ I + F + + +E A +F
Sbjct: 113 STALYNTAFGLIVAIPALIFWRYFRSRVDAYLLTLELSAEQF 154
>gi|323492747|ref|ZP_08097891.1| Tol R/Q protein [Vibrio brasiliensis LMG 20546]
gi|323313122|gb|EGA66242.1| Tol R/Q protein [Vibrio brasiliensis LMG 20546]
Length = 451
Score = 37.4 bits (85), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Query: 115 RMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIP 173
R+++ A+ E + + LS L +++ ++G+LG V GM+ FQ I + + + V
Sbjct: 329 RLLE-AVVDEQASLEKGLSMLKLLAALAPMLGLLGTVTGMIETFQVITQFGNGDPKVMAG 387
Query: 174 GIIESLISILLGLCVSIPSSIAYN 197
GI +L++ +LGL ++P +A+N
Sbjct: 388 GISMALVTTVLGLIAAMPLLLAHN 411
>gi|269966637|ref|ZP_06180717.1| biopolymer transport protein ExbB-related protein [Vibrio
alginolyticus 40B]
gi|269828759|gb|EEZ83013.1| biopolymer transport protein ExbB-related protein [Vibrio
alginolyticus 40B]
Length = 455
Score = 37.4 bits (85), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 120 AIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIES 178
A+ E + + LS L +++ ++G+LG V GM+ FQ I + + + V GI +
Sbjct: 333 AVVDEQTHLEKGLSMLKLLAALAPMLGLLGTVTGMIETFQVITQFGNGDPKVMAGGISMA 392
Query: 179 LISILLGLCVSIPSSIAYN 197
L++ +LGL ++P +A+N
Sbjct: 393 LVTTVLGLVSAMPLLLAHN 411
>gi|89075637|ref|ZP_01162038.1| putative biopolymer transport protein ExbB-related protein
[Photobacterium sp. SKA34]
gi|89048644|gb|EAR54217.1| putative biopolymer transport protein ExbB-related protein
[Photobacterium sp. SKA34]
Length = 455
Score = 37.4 bits (85), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Query: 115 RMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIP 173
R+++ AI E + + + LS L ++ ++G+LG V GM+ FQ I + + + V
Sbjct: 329 RLLE-AIVDEQQGLEKGLSMLKLFAALAPMLGLLGTVTGMIETFQVITQFGNGDPKVMAG 387
Query: 174 GIIESLISILLGLCVSIPSSIAYN 197
GI +L++ +LGL ++P +A+N
Sbjct: 388 GISMALVTTVLGLIAAMPLLLAHN 411
>gi|238018772|ref|ZP_04599198.1| hypothetical protein VEIDISOL_00630 [Veillonella dispar ATCC 17748]
gi|237864538|gb|EEP65828.1| hypothetical protein VEIDISOL_00630 [Veillonella dispar ATCC 17748]
Length = 179
Score = 37.4 bits (85), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 49/96 (51%), Gaps = 4/96 (4%)
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIP 191
+ +L + + L+G+LG V GM+G F + + ++ G+ E+LI+ GLCV+I
Sbjct: 86 MDYLSATVTISPLLGLLGTVTGMIGSFSILDSGAGASAIT-GGVGEALIATASGLCVAIM 144
Query: 192 SSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEG 227
+ I Y F Q+E N +I+S + EG
Sbjct: 145 AFIVYTVFSHRLDAIINQIE---NMCVSIVSAKREG 177
>gi|88860776|ref|ZP_01135413.1| transport protein TolQ-like [Pseudoalteromonas tunicata D2]
gi|88817371|gb|EAR27189.1| transport protein TolQ-like [Pseudoalteromonas tunicata D2]
Length = 448
Score = 37.4 bits (85), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 144 LVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIPSSIAYNKFIED 202
L+G+LG V GM+ F+ + + + + ++ G I E+L++ LGL V+IP+ + +
Sbjct: 359 LLGLLGTVSGMIETFKLMTLFGAGDAAAVSGGISEALVTTELGLVVAIPALLCHALLSRR 418
Query: 203 SKKFAMQMEGFANEFSAI 220
+K + ++E A S +
Sbjct: 419 AKTYYGELESCAVNLSQL 436
>gi|91228114|ref|ZP_01262156.1| biopolymer transport protein ExbB-related protein [Vibrio
alginolyticus 12G01]
gi|91188232|gb|EAS74532.1| biopolymer transport protein ExbB-related protein [Vibrio
alginolyticus 12G01]
Length = 455
Score = 37.4 bits (85), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 120 AIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIES 178
A+ E + + LS L +++ ++G+LG V GM+ FQ I + + + V GI +
Sbjct: 333 AVVDEQTHLEKGLSMLKLLAALAPMLGLLGTVTGMIETFQVITQFGNGDPKVMAGGISMA 392
Query: 179 LISILLGLCVSIPSSIAYN 197
L++ +LGL ++P +A+N
Sbjct: 393 LVTTVLGLVSAMPLLLAHN 411
>gi|313683196|ref|YP_004060934.1| outer membrane transport energization protein exbb [Sulfuricurvum
kujiense DSM 16994]
gi|313156056|gb|ADR34734.1| outer membrane transport energization protein ExbB [Sulfuricurvum
kujiense DSM 16994]
Length = 149
Score = 37.4 bits (85), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 51/99 (51%), Gaps = 2/99 (2%)
Query: 115 RMMDVAIARELE-EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI- 172
R+ D ELE ++ +S + ++ S VG+LG VLG+M F S+ + + I
Sbjct: 43 RIGDYESKEELELDLGNNVSTIATIGSNAPYVGLLGTVLGIMITFYSLGDVGAVDPKKIM 102
Query: 173 PGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
G+ +L + +GL V+IP+ + YN + ++ Q +
Sbjct: 103 TGLALALKATAMGLVVAIPAIVFYNILLRKMERLLAQWD 141
>gi|87118937|ref|ZP_01074835.1| MotA/TolQ/ExbB proton channel [Marinomonas sp. MED121]
gi|86165328|gb|EAQ66595.1| MotA/TolQ/ExbB proton channel [Marinomonas sp. MED121]
Length = 210
Score = 37.4 bits (85), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 49/93 (52%), Gaps = 1/93 (1%)
Query: 120 AIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGY-YSNNVVSIPGIIES 178
A + + E+ ++ LG++++ L+G+LG V+GM+ F + + + GI E+
Sbjct: 95 AASHVIHELERFMNTLGTIAAISPLLGLLGTVVGMIKVFAVLMEQGVGDTALLAGGISEA 154
Query: 179 LISILLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
L++ GL V+IP+ I + F + + ME
Sbjct: 155 LLTTAAGLGVAIPALIFHRFFARRIDELVVTME 187
>gi|283780490|ref|YP_003371245.1| MotA/TolQ/ExbB proton channel [Pirellula staleyi DSM 6068]
gi|283438943|gb|ADB17385.1| MotA/TolQ/ExbB proton channel [Pirellula staleyi DSM 6068]
Length = 215
Score = 37.4 bits (85), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIE-SLISIL 183
L ++ ++S++ ++ ++G+LG VLGMM F +A + + I +LI+
Sbjct: 109 LGDLDHRISWINNVIKTAPMLGLLGTVLGMMAAFGKLASEANVKPDQLASDISFALITTA 168
Query: 184 LGLCVSIPSSI 194
+GL ++IP++I
Sbjct: 169 IGLAIAIPATI 179
>gi|170522212|gb|ACB20384.1| TtpC [Vibrio alginolyticus]
Length = 454
Score = 37.4 bits (85), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 120 AIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIES 178
A+ E + + LS L +++ ++G+LG V GM+ FQ I + + + V GI +
Sbjct: 332 AVVDEQTHLEKGLSMLKLLAALAPMLGLLGTVTGMIETFQVITQFGNGDPKVMAGGISMA 391
Query: 179 LISILLGLCVSIPSSIAYN 197
L++ +LGL ++P +A+N
Sbjct: 392 LVTTVLGLVSAMPLLLAHN 410
>gi|117620189|ref|YP_858667.1| TonB system biopolymer transport component [Aeromonas hydrophila
subsp. hydrophila ATCC 7966]
gi|117561596|gb|ABK38544.1| TonB system biopolymer transport component [Aeromonas hydrophila
subsp. hydrophila ATCC 7966]
Length = 176
Score = 37.4 bits (85), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 30/138 (21%), Positives = 61/138 (44%), Gaps = 9/138 (6%)
Query: 81 NIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSS 140
N+G A + + W+ ++ + I+ R +A E+ L F+ ++
Sbjct: 42 NLGFAPLQRQLLGRWQARSERHSWHARAIRGRW-------LAEAELELNRHLIFIRTLVV 94
Query: 141 AGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISILLGLCVSIPSSIAYNKF 199
++G+LG V GM+G F ++A N S+ GI + I + G+ V++ + ++
Sbjct: 95 LCPMLGLLGTVTGMIGVFDALAAANRFNPESMAGGISRATIPTMAGMVVALSGVLLLSRL 154
Query: 200 IEDSKK-FAMQMEGFANE 216
+K+ A +G E
Sbjct: 155 ESQAKRALAKTRDGLREE 172
>gi|237739471|ref|ZP_04569952.1| biopolymer transport exbB protein [Fusobacterium sp. 2_1_31]
gi|229423079|gb|EEO38126.1| biopolymer transport exbB protein [Fusobacterium sp. 2_1_31]
Length = 203
Score = 37.4 bits (85), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Query: 123 RELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLIS 181
+++ + + L ++A L+G+LG V GM+ F SIA + + + GI E+L +
Sbjct: 102 EQIKHLERNMWLLSLAANASPLLGLLGTVTGMITAFNSIALNGTGDAGILAKGISEALYT 161
Query: 182 ILLGLCVSIPSSIAYNKF 199
GL V+IP I YN F
Sbjct: 162 TAGGLFVAIPCMIFYNYF 179
>gi|193215622|ref|YP_001996821.1| MotA/TolQ/ExbB proton channel [Chloroherpeton thalassium ATCC
35110]
gi|193089099|gb|ACF14374.1| MotA/TolQ/ExbB proton channel [Chloroherpeton thalassium ATCC
35110]
Length = 258
Score = 37.4 bits (85), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 60/123 (48%), Gaps = 3/123 (2%)
Query: 79 HHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSM 138
HN +++ MS + ++ + R I + + + +D + E + L+ + ++
Sbjct: 101 RHNSSISSCIMSGLERFRSLDEVEPRFNAKISE-VQKAIDESANFESAQYETNLTPIKTI 159
Query: 139 SSAGLLVGILGAVLGMMGFFQSIA--GYYSNNVVSIPGIIESLISILLGLCVSIPSSIAY 196
++ L+G+LG LGM+ F ++A G ++ I E+L + GL +I ++A+
Sbjct: 160 ATIATLIGLLGTTLGMIRAFAALAESGGAADATKLSAAISEALFNTAFGLTGAILGTVAF 219
Query: 197 NKF 199
N F
Sbjct: 220 NYF 222
>gi|91793776|ref|YP_563427.1| MotA/TolQ/ExbB proton channel [Shewanella denitrificans OS217]
gi|91715778|gb|ABE55704.1| MotA/TolQ/ExbB proton channel [Shewanella denitrificans OS217]
Length = 450
Score = 37.4 bits (85), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 117 MDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII 176
+D AI +E + ++S + +++ ++G+LG V GM+ FQSI + + + + G I
Sbjct: 339 LDEAILKETPALEARISIIKVLAAIAPMMGLLGTVTGMIATFQSIQLFGTGDPKLMAGGI 398
Query: 177 E-SLISILLGLCVSIP 191
+L++ + GL ++P
Sbjct: 399 SMALVTTVQGLIAALP 414
>gi|330448370|ref|ZP_08312018.1| motA/TolQ/ExbB proton channel family protein [Photobacterium
leiognathi subsp. mandapamensis svers.1.1.]
gi|328492561|dbj|GAA06515.1| motA/TolQ/ExbB proton channel family protein [Photobacterium
leiognathi subsp. mandapamensis svers.1.1.]
Length = 455
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Query: 115 RMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIP 173
R+++ AI E + + + LS L ++ ++G+LG V GM+ FQ I + + + V
Sbjct: 329 RLLE-AIVDEQQGLEKGLSMLKLFAALAPMLGLLGTVTGMIETFQVITQFGNGDPKVMAG 387
Query: 174 GIIESLISILLGLCVSIPSSIAYN 197
GI +L++ +LGL ++P +A+N
Sbjct: 388 GISMALVTTVLGLIAAMPLLLAHN 411
>gi|291286835|ref|YP_003503651.1| tonB-system energizer ExbB [Denitrovibrio acetiphilus DSM 12809]
gi|290883995|gb|ADD67695.1| tonB-system energizer ExbB [Denitrovibrio acetiphilus DSM 12809]
Length = 144
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+T+++ + ++ S VG+LG VLG+M F +I + +V I G+ SL + GL
Sbjct: 52 LTKRMYIVATVGSNAPYVGLLGTVLGIMHTFYAIGAKGTTDVNMIMTGLALSLKATAAGL 111
Query: 187 CVSIPSSIAYN 197
+IP+ I YN
Sbjct: 112 VTAIPAIILYN 122
>gi|242310386|ref|ZP_04809541.1| TonB-system energizer ExbB [Helicobacter pullorum MIT 98-5489]
gi|239522784|gb|EEQ62650.1| TonB-system energizer ExbB [Helicobacter pullorum MIT 98-5489]
Length = 142
Score = 37.0 bits (84), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 43/75 (57%), Gaps = 5/75 (6%)
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVS---IPGIIESLISI 182
+ IT+ L+ L + S VG+LG V+G+M F + S N+ + + G+ +L +
Sbjct: 50 DSITKNLTTLYIIYSNAPYVGLLGTVIGIMITFYDMG--LSGNIDTKEIMTGLSLALKAT 107
Query: 183 LLGLCVSIPSSIAYN 197
LGL V+IP+ IAYN
Sbjct: 108 ALGLAVAIPTLIAYN 122
>gi|288574443|ref|ZP_06392800.1| MotA/TolQ/ExbB proton channel [Dethiosulfovibrio peptidovorans DSM
11002]
gi|288570184|gb|EFC91741.1| MotA/TolQ/ExbB proton channel [Dethiosulfovibrio peptidovorans DSM
11002]
Length = 205
Score = 37.0 bits (84), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 91/191 (47%), Gaps = 22/191 (11%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQL----FWSGQ 67
SI + G V CI L S++ +V+++++ F+ + EQ + G
Sbjct: 4 SILSFLNLGGPVVWCIAGL----SVIGLAVVLERAFFFMNSWENPEKVEQALCERLYEGD 59
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
SL + L +F++ ++ WK D + ++D I RE+
Sbjct: 60 P--AGATSLLREKDTSLRRLFLAGVNHWKTDGDS-----------LKMLLDGQIRREVFR 106
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISILLGL 186
++ LS L +++ L+G+LG VLGM+ FQS+ +V++ GI ++L++ + GL
Sbjct: 107 WSKGLSILSAVARIAPLLGLLGTVLGMVDIFQSLPETDQAPMVALAGGIWKALLTTVAGL 166
Query: 187 CVSIPSSIAYN 197
V++P+ + ++
Sbjct: 167 AVAVPAVLCHS 177
>gi|160890801|ref|ZP_02071804.1| hypothetical protein BACUNI_03246 [Bacteroides uniformis ATCC 8492]
gi|317479761|ref|ZP_07938883.1| MotA/TolQ/ExbB proton channel family protein [Bacteroides sp.
4_1_36]
gi|156859800|gb|EDO53231.1| hypothetical protein BACUNI_03246 [Bacteroides uniformis ATCC 8492]
gi|316904131|gb|EFV25963.1| MotA/TolQ/ExbB proton channel family protein [Bacteroides sp.
4_1_36]
Length = 238
Score = 37.0 bits (84), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 53/105 (50%), Gaps = 2/105 (1%)
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI--PGIIESLIS 181
E+ ++ + ++ + ++S ++G LG V GM+ F +A +N +++ GI E++I+
Sbjct: 134 EVAKLEKGMTIMATISGGAPMLGFLGTVTGMVRAFWQMANAGNNIDITLLSGGIYEAMIT 193
Query: 182 ILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+ GL V I + AYN + +ME F +L+ +
Sbjct: 194 TVGGLIVGIIAMFAYNYLVTLIDGVVNKMEAKTMAFMDLLNEPAK 238
>gi|90577869|ref|ZP_01233680.1| putative biopolymer transport protein ExbB-related protein [Vibrio
angustum S14]
gi|90440955|gb|EAS66135.1| putative biopolymer transport protein ExbB-related protein [Vibrio
angustum S14]
Length = 455
Score = 37.0 bits (84), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Query: 115 RMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIP 173
R+++ AI E + + + LS L ++ ++G+LG V GM+ FQ I + + + V
Sbjct: 329 RLLE-AIVDEQQGLEKGLSMLKLFAALAPMLGLLGTVTGMIETFQVITQFGNGDPKVMAG 387
Query: 174 GIIESLISILLGLCVSIPSSIAYN 197
GI +L++ +LGL ++P +A+N
Sbjct: 388 GISMALVTTVLGLIAAMPLLLAHN 411
>gi|293393011|ref|ZP_06637328.1| MotA/TolQ/ExbB proton channel family protein [Serratia odorifera
DSM 4582]
gi|291424545|gb|EFE97757.1| MotA/TolQ/ExbB proton channel family protein [Serratia odorifera
DSM 4582]
Length = 222
Score = 37.0 bits (84), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 88/179 (49%), Gaps = 20/179 (11%)
Query: 18 MQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ-LFWSGQSLETVCKSL 76
M L I +++ +++ +II++++ F +RQ R EQ L + + ++L
Sbjct: 7 MNANLLHDIIFYVMYAALVIALVIIIERALYFAYTQRQARRLEQALTPQVRRAGDLPQAL 66
Query: 77 KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL---EEITEKLS 133
+++ LA I + E K D DR + + DV A+ L ++ L
Sbjct: 67 TQRNSLPLAVIL--PVLEQKHQAD----------DR-ETLGDVIDAQYLLSKPPMSRGLW 113
Query: 134 FLGSMSSAGLLVGILGAVLGMMGFFQSIA--GYYSNNVVSIPGIIESLISILLGLCVSI 190
L ++ +A L+G+LG V+G++ F+++A G ++VS G+ +L + LG+ +++
Sbjct: 114 LLETIVTAAPLLGLLGTVMGIIETFKALAASGVSEPSLVSA-GMGTALYATGLGIAIAL 171
>gi|114706010|ref|ZP_01438913.1| MotA/TolQ/ExbB proton channel family protein [Fulvimarina pelagi
HTCC2506]
gi|114538856|gb|EAU41977.1| MotA/TolQ/ExbB proton channel family protein [Fulvimarina pelagi
HTCC2506]
Length = 241
Score = 37.0 bits (84), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 66/129 (51%), Gaps = 21/129 (16%)
Query: 101 KGARSPIG--IQDRIDRMMDVAIARE-LEE-----ITEKLSFLGS-------MSSAGLLV 145
+G R P+ + I M ++AR+ +EE TE+L LGS ++ L+
Sbjct: 73 EGGRGPVAGVVASAIRGAMTRSLARQTIEEDVQRIATERLHSLGSGLRLLEAIAQIAPLL 132
Query: 146 GILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKF---I 200
G+ G VLGM+ FQ++ AG + GI +L++ +GL V++PS + F I
Sbjct: 133 GLFGTVLGMIEAFQAMQNAGSDVDPSQLAGGIWVALLTTAVGLAVAMPSQLLTTWFDGRI 192
Query: 201 EDSKKFAMQ 209
E+ ++ AM+
Sbjct: 193 EN-ERVAME 200
>gi|153864579|ref|ZP_01997436.1| MotA/TolQ/ExbB proton channel family domain protein [Beggiatoa sp.
SS]
gi|152145927|gb|EDN72565.1| MotA/TolQ/ExbB proton channel family domain protein [Beggiatoa sp.
SS]
Length = 225
Score = 37.0 bits (84), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 53/117 (45%), Gaps = 26/117 (22%)
Query: 63 FWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGAR----SPIGI--------- 109
FWS QS + V K GL A E K + AR SP+G+
Sbjct: 30 FWSLQSQKVVPK--------GLVAQVWKWAKEGKLDKQRLARLRNHSPLGLILVAGLVNR 81
Query: 110 -QDRIDRMMDV---AIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA 162
DR D M D A R + ++ + L+ LG+++ L+G+LG V+GM+ F +I
Sbjct: 82 YHDR-DMMKDAIQEASNRVIHDLEKYLNTLGTIAEIAPLLGLLGTVMGMIRMFAAIG 137
>gi|149192232|ref|ZP_01870447.1| biopolymer transport protein ExbB-related protein [Vibrio shilonii
AK1]
gi|148833934|gb|EDL50956.1| biopolymer transport protein ExbB-related protein [Vibrio shilonii
AK1]
Length = 452
Score = 37.0 bits (84), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Query: 115 RMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGY-YSNNVVSIP 173
R+++ +I E + + LS L +++ ++G+LG V GM+ FQ I + + V
Sbjct: 332 RLLE-SIMDEQQHLERGLSMLKLLAALAPMLGLLGTVTGMIETFQVITQFGNAEPRVMAG 390
Query: 174 GIIESLISILLGLCVSIPSSIAYN 197
GI +L++ +LGL ++P +A+N
Sbjct: 391 GISMALVTTVLGLITAMPLLLAHN 414
>gi|317011576|gb|ADU85323.1| biopolymer transport protein [Helicobacter pylori SouthAfrica7]
Length = 150
Score = 37.0 bits (84), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 55/110 (50%), Gaps = 11/110 (10%)
Query: 112 RIDRMMDVAIARELE-EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
R+D D R+LE + ++L+ + ++ S +G+LG V+G+M F + S + +
Sbjct: 35 RVDDYTD---RRKLELALHKRLTLVATIGSNAPYIGLLGTVMGIMLTFMDLG---SASGI 88
Query: 171 SIPGIIESLISIL----LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANE 216
I+ +L L +GL V+IP+ + YN + S+ + + F +
Sbjct: 89 DTKAIMTNLALALKATGMGLLVAIPAIVIYNMLVRKSEILVTKWDIFHHP 138
>gi|262066199|ref|ZP_06025811.1| biopolymer transport ExbB protein [Fusobacterium periodonticum ATCC
33693]
gi|291380106|gb|EFE87624.1| biopolymer transport ExbB protein [Fusobacterium periodonticum ATCC
33693]
Length = 203
Score = 37.0 bits (84), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 139 SSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYN 197
++A L+G+LG V GM+ F SIA + + + GI E+L + GL V+IP I YN
Sbjct: 118 ANASPLLGLLGTVTGMITAFNSIALNGTGDAGILAKGISEALYTTAGGLFVAIPCMIFYN 177
Query: 198 KF 199
F
Sbjct: 178 YF 179
>gi|157374711|ref|YP_001473311.1| MotA/TolQ/ExbB proton channel [Shewanella sediminis HAW-EB3]
gi|157317085|gb|ABV36183.1| MotA/TolQ/ExbB proton channel [Shewanella sediminis HAW-EB3]
Length = 451
Score = 37.0 bits (84), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 51/96 (53%), Gaps = 1/96 (1%)
Query: 117 MDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII 176
+D AI +E + ++S + +++ ++G+LG V GM+ FQSI + + + + G I
Sbjct: 340 LDEAILKETPALETRISIIKVLAAIAPMMGLLGTVTGMIATFQSIQLFGTGDPKLMAGGI 399
Query: 177 E-SLISILLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
+L++ + GL ++P + + I SK +E
Sbjct: 400 SMALMTTVQGLVAALPLMLMHAVVIARSKSIVQVLE 435
>gi|315180093|gb|ADT87007.1| biopolymer transport protein ExbB-related protein [Vibrio furnissii
NCTC 11218]
Length = 455
Score = 37.0 bits (84), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Query: 115 RMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIP 173
R+++ A+ E + + LS L +++ ++G+LG V GM+ FQ I + + + V
Sbjct: 331 RLLE-AVVDEQTGLEKGLSMLKLLAALAPMLGLLGTVTGMIETFQVITQFGNGDPKVMAG 389
Query: 174 GIIESLISILLGLCVSIPSSIAYN 197
GI +L++ +LGL ++P +A+N
Sbjct: 390 GISMALVTTVLGLVAAMPLLLAHN 413
>gi|260768382|ref|ZP_05877316.1| MotA/TolQ/ExbB proton channel family protein [Vibrio furnissii CIP
102972]
gi|260616412|gb|EEX41597.1| MotA/TolQ/ExbB proton channel family protein [Vibrio furnissii CIP
102972]
Length = 455
Score = 37.0 bits (84), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Query: 115 RMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIP 173
R+++ A+ E + + LS L +++ ++G+LG V GM+ FQ I + + + V
Sbjct: 331 RLLE-AVVDEQTGLEKGLSMLKLLAALAPMLGLLGTVTGMIETFQVITQFGNGDPKVMAG 389
Query: 174 GIIESLISILLGLCVSIPSSIAYN 197
GI +L++ +LGL ++P +A+N
Sbjct: 390 GISMALVTTVLGLVAAMPLLLAHN 413
>gi|270295800|ref|ZP_06202000.1| conserved hypothetical protein [Bacteroides sp. D20]
gi|270273204|gb|EFA19066.1| conserved hypothetical protein [Bacteroides sp. D20]
Length = 238
Score = 37.0 bits (84), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 53/105 (50%), Gaps = 2/105 (1%)
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI--PGIIESLIS 181
E+ ++ + ++ + ++S ++G LG V GM+ F +A +N +++ GI E++I+
Sbjct: 134 EVAKLEKGMTIMATISGGAPMLGFLGTVTGMVRAFWQMANAGNNIDITMLSGGIYEAMIT 193
Query: 182 ILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+ GL V I + AYN + +ME F +L+ +
Sbjct: 194 TVGGLIVGIIAMFAYNYLVTLIDGVVNKMEAKTMAFMDLLNEPAK 238
>gi|114563791|ref|YP_751304.1| MotA/TolQ/ExbB proton channel [Shewanella frigidimarina NCIMB 400]
gi|114335084|gb|ABI72466.1| MotA/TolQ/ExbB proton channel [Shewanella frigidimarina NCIMB 400]
Length = 451
Score = 37.0 bits (84), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 117 MDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII 176
+D AI +E + ++S + +++ ++G+LG V GM+ FQSI + + + + G I
Sbjct: 340 LDEAILKETPALEARISIIKVIAAIAPMMGLLGTVTGMIATFQSIQLFGTGDPKLMAGGI 399
Query: 177 E-SLISILLGLCVSIP 191
+LI+ + GL ++P
Sbjct: 400 SMALITTVQGLIAALP 415
>gi|110598373|ref|ZP_01386646.1| MotA/TolQ/ExbB proton channel [Chlorobium ferrooxidans DSM 13031]
gi|110339982|gb|EAT58484.1| MotA/TolQ/ExbB proton channel [Chlorobium ferrooxidans DSM 13031]
Length = 225
Score = 37.0 bits (84), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 54/97 (55%), Gaps = 1/97 (1%)
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISI 182
E + ++ +SFL ++ + +G+ G V G+M FQ+I S ++ + PGI E+LI+
Sbjct: 117 EGKRLSSLISFLATVGNTAPFIGLFGTVWGIMTSFQNIGQSQSASLAIVAPGISEALIAT 176
Query: 183 LLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
GL +IP+ I YN F + +E F+ EF+A
Sbjct: 177 AAGLAAAIPAVIGYNYFSQQIGSIEHDLEEFSPEFAA 213
>gi|330969759|gb|EGH69825.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. aceris
str. M302273PT]
Length = 122
Score = 37.0 bits (84), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 5/58 (8%)
Query: 20 MGLAVKCIIT-----LLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
M A +IT LL IFS+++W++++ K+ L RQ R + FW+ + L+
Sbjct: 1 MNTAYSVLITQSSMALLVIFSLVTWALLLGKTFQHWRLTRQNRRYATQFWAARDLKNA 58
>gi|317178149|dbj|BAJ55938.1| biopolymer transport protein [Helicobacter pylori F16]
Length = 152
Score = 37.0 bits (84), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 55/110 (50%), Gaps = 11/110 (10%)
Query: 112 RIDRMMDVAIARELE-EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
R+D D R+LE + ++L+ + ++ S +G+LG V+G+M F + S + +
Sbjct: 35 RVDDYTD---KRKLELALHKRLTLVATIGSNAPYIGLLGTVMGIMLTFMDLG---SASGI 88
Query: 171 SIPGIIESLISIL----LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANE 216
I+ +L L +GL V+IP+ + YN + S+ + + F +
Sbjct: 89 DTKAIMTNLALALKATGMGLLVAIPAIVIYNLLVRKSEILVTKWDIFHHP 138
>gi|157962472|ref|YP_001502506.1| MotA/TolQ/ExbB proton channel [Shewanella pealeana ATCC 700345]
gi|157847472|gb|ABV87971.1| MotA/TolQ/ExbB proton channel [Shewanella pealeana ATCC 700345]
Length = 451
Score = 37.0 bits (84), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 51/96 (53%), Gaps = 1/96 (1%)
Query: 117 MDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII 176
+D AI +E + ++S + +++ ++G+LG V GM+ FQSI + + + + G I
Sbjct: 340 LDEAILKETPALETRISIIKVLAAIAPMMGLLGTVTGMIATFQSIQLFGTGDPKLMAGGI 399
Query: 177 E-SLISILLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
+L++ + GL ++P + + I SK +E
Sbjct: 400 SMALMTTVQGLVAALPLMLMHAVVIARSKSIVQVLE 435
>gi|222823493|ref|YP_002575067.1| TonB system transport protein ExbB [Campylobacter lari RM2100]
gi|222538715|gb|ACM63816.1| TonB system transport protein ExbB [Campylobacter lari RM2100]
Length = 143
Score = 37.0 bits (84), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISILL 184
+ I+E L+ L + + VG+LG V+G+M F + + +V SI G+ +L + L
Sbjct: 50 DAISENLTMLYIIYTNAPYVGLLGTVVGIMITFYDMGASGNIDVKSIVIGLSLALKATAL 109
Query: 185 GLCVSIPSSIAYN 197
G+ V+IPS +AYN
Sbjct: 110 GILVAIPSLMAYN 122
>gi|331019522|gb|EGH99578.1| TonB system transport protein ExbB [Pseudomonas syringae pv.
lachrymans str. M302278PT]
Length = 102
Score = 37.0 bits (84), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 151 VLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQ 209
V G+M + I+ S ++ ++ G I +L++ +G+ V++P+ + YN F+ K A
Sbjct: 1 VWGIMSALKGISAAGSASLETVAGPIGAALVATGVGIAVAVPAVLVYNYFLRRLKLTAAD 60
Query: 210 MEGFANEF 217
++ FA++F
Sbjct: 61 LDDFAHDF 68
>gi|127513405|ref|YP_001094602.1| MotA/TolQ/ExbB proton channel [Shewanella loihica PV-4]
gi|126638700|gb|ABO24343.1| MotA/TolQ/ExbB proton channel [Shewanella loihica PV-4]
Length = 451
Score = 37.0 bits (84), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 54/110 (49%), Gaps = 13/110 (11%)
Query: 95 WKKSCDKGARSPIG-----IQDRID-------RMMDVAIARELEEITEKLSFLGSMSSAG 142
+K+ D +P+G D D +D AI +E + ++S + +++
Sbjct: 306 QRKNIDNPGNNPLGRVLKAYHDNKDVDVETLELKLDEAILKETPALETRISIIKVLAAIA 365
Query: 143 LLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIE-SLISILLGLCVSIP 191
++G+LG V GM+ FQSI + + + + G I +L++ + GL ++P
Sbjct: 366 PMMGLLGTVTGMIATFQSIQLFGTGDPKLMAGGISMALMTTVQGLVAALP 415
>gi|325104642|ref|YP_004274296.1| outer membrane transport energization protein ExbB [Pedobacter
saltans DSM 12145]
gi|324973490|gb|ADY52474.1| outer membrane transport energization protein ExbB [Pedobacter
saltans DSM 12145]
Length = 229
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 67/142 (47%), Gaps = 25/142 (17%)
Query: 101 KGARSPIGIQDRIDRMMD---VAIARELEEITEKLSFLGSMSSAGLL--VGILGAVLG-- 153
K + SP+G RM+ + + R ++EI + +G + + L VGILG + G
Sbjct: 91 KSSNSPLG------RMLQKGLLRVGRPIKEIEGSIENVGKLEVSKLEKNVGILGIIAGIA 144
Query: 154 -MMGFFQSIAGYYSN-NVVSIPGIIE----------SLISILLGLCVSIPSSIAYNKFIE 201
M+GF +I G + + VS+ GIIE +IS GL + I S + YN +
Sbjct: 145 PMLGFVGTIIGVITIFHDVSVKGIIEIGTISGGLYVKMISSATGLIIGIVSYVFYNILMM 204
Query: 202 DSKKFAMQMEGFANEFSAILSR 223
K ++ME + EF +L
Sbjct: 205 MIDKVILKMETDSIEFIDLLEE 226
>gi|261840120|gb|ACX99885.1| MotA/TolQ/ExbB proton channel [Helicobacter pylori 52]
gi|297380702|gb|ADI35589.1| tonB-system energizer ExbB [Helicobacter pylori v225d]
Length = 150
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 55/110 (50%), Gaps = 11/110 (10%)
Query: 112 RIDRMMDVAIARELE-EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
R+D D R+LE + ++L+ + ++ S +G+LG V+G+M F + S + +
Sbjct: 35 RVDDYTD---RRKLELALHKRLTLVATIGSNAPYIGLLGTVMGIMLTFMDLG---SASGI 88
Query: 171 SIPGIIESLISIL----LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANE 216
I+ +L L +GL V+IP+ + YN + S+ + + F +
Sbjct: 89 DTKAIMTNLALALKATGMGLLVAIPAIVIYNLLVRKSEILVTKWDIFHHP 138
>gi|78188527|ref|YP_378865.1| MotA/TolQ/ExbB proton channel family protein [Chlorobium
chlorochromatii CaD3]
gi|78170726|gb|ABB27822.1| outer membrane transport energization protein ExbB [Chlorobium
chlorochromatii CaD3]
Length = 247
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 24/103 (23%), Positives = 49/103 (47%), Gaps = 1/103 (0%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
+ +++ A + + L L +++S +VG+LG LGM+ F ++A + +
Sbjct: 130 RQELEKAATDATTIAMPTLERNLVVLSTIASISTMVGLLGTTLGMIRAFAAMATNGAPDA 189
Query: 170 VSIP-GIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
+ GI E+L + LG+C I +A+N + +M+
Sbjct: 190 AQLSLGISEALFNTALGICGGIFGIVAFNLLSNRVDRIGYEMD 232
>gi|254448176|ref|ZP_05061639.1| MotA/TolQ/ExbB proton channel [gamma proteobacterium HTCC5015]
gi|198262302|gb|EDY86584.1| MotA/TolQ/ExbB proton channel [gamma proteobacterium HTCC5015]
Length = 460
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Query: 120 AIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIES 178
AIA E+ + ++ +++ L+G+LG V GM+ F+++A + + + GI ++
Sbjct: 349 AIANEVPVFNRYIGWIKLIAAVAPLLGLLGTVTGMISVFETLALSGAGDPKDMAGGISQA 408
Query: 179 LISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
L++ +LGL +IP+ + S+ + +E A + IL+RQ E
Sbjct: 409 LMTTVLGLVAAIPALFMHALCTSMSRTQVLILEERA---TGILARQAE 453
>gi|260222818|emb|CBA32766.1| hypothetical protein Csp_B15670 [Curvibacter putative symbiont of
Hydra magnipapillata]
Length = 208
Score = 36.6 bits (83), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 59/126 (46%), Gaps = 4/126 (3%)
Query: 90 SAMSEWKKSCDKGARS-PIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGIL 148
SA+ E S + S P +D + M+ A + + L+ LG+++SA L+G+
Sbjct: 68 SALGEVLASALRAVNSDPHCSEDDLRATMEGAGRLVAQRLENYLTALGTIASAAPLLGLF 127
Query: 149 GAVLGMMGFFQSIAGYYS---NNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKK 205
G V+GM+ F S A + N GI +L + GL V+IPS I + F
Sbjct: 128 GTVVGMIEIFGSQAPGSTGGGNPAQLAHGISIALYNTAFGLVVAIPSLIFWRYFRGRVDA 187
Query: 206 FAMQME 211
+ + +E
Sbjct: 188 YLLTLE 193
>gi|315585833|gb|ADU40214.1| TonB family auxiliary protein ExbB [Helicobacter pylori 35A]
Length = 150
Score = 36.6 bits (83), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 55/110 (50%), Gaps = 11/110 (10%)
Query: 112 RIDRMMDVAIARELE-EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
R+D D R+LE + ++L+ + ++ S +G+LG V+G+M F + S + +
Sbjct: 35 RVDDYTD---RRKLELALHKRLTLVATIGSNAPYIGLLGTVMGIMLTFMDLG---SASGI 88
Query: 171 SIPGIIESLISIL----LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANE 216
I+ +L L +GL V+IP+ + YN + S+ + + F +
Sbjct: 89 DTKAIMTNLALALKATGMGLLVAIPAIVIYNLLVRKSEILVTKWDIFHHP 138
>gi|119946046|ref|YP_943726.1| MotA/TolQ/ExbB proton channel [Psychromonas ingrahamii 37]
gi|119864650|gb|ABM04127.1| MotA/TolQ/ExbB proton channel [Psychromonas ingrahamii 37]
Length = 197
Score = 36.6 bits (83), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 45/84 (53%), Gaps = 5/84 (5%)
Query: 144 LVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIE 201
L+G++G VLGM+ FQ + AG + + I ++L++ ++GL V+IP AY+
Sbjct: 101 LLGLMGTVLGMISAFQKMEAAGNQVDPSILSGEIWQALLTTVVGLAVAIPVVAAYHLLDR 160
Query: 202 DSKKFAMQMEGFANEFSAILSRQT 225
++ + M + + ++QT
Sbjct: 161 KVERISNSMNSYVTR---VFTQQT 181
>gi|163786286|ref|ZP_02180734.1| putative biopolymer transport protein [Flavobacteriales bacterium
ALC-1]
gi|159878146|gb|EDP72202.1| putative biopolymer transport protein [Flavobacteriales bacterium
ALC-1]
Length = 231
Score = 36.6 bits (83), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 51/97 (52%), Gaps = 4/97 (4%)
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGM-MGFFQ--SIAGYYSNNVVSIPGIIESLI 180
E+ + + +S L ++S ++G LG V+GM + F+ + G +V++ G+ ++
Sbjct: 128 EVYGLEKNVSVLATISGVAPMIGFLGTVVGMILSIFELANAGGTIQMDVLA-SGLYTAMT 186
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEF 217
+ + GL V I + +AYN + + K ME + EF
Sbjct: 187 TTVGGLVVGIIAYVAYNHIVVKTNKVVHSMEANSVEF 223
>gi|126732839|ref|ZP_01748632.1| MotA/TolQ/ExbB proton channel [Sagittula stellata E-37]
gi|126706678|gb|EBA05751.1| MotA/TolQ/ExbB proton channel [Sagittula stellata E-37]
Length = 213
Score = 36.6 bits (83), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 81/178 (45%), Gaps = 22/178 (12%)
Query: 31 LFIFSILSWSVIIQKSVNFITL----RRQFREFEQLFWSGQSLETVCKSLKNHHNIG--L 84
L I S+L+ +V I K V F+ L R++ E + SG++ + ++ K + L
Sbjct: 20 LGILSLLAIAVAIYKWVQFMVLGVGRRKRAEEILDNWLSGRADLALQQAQKRKSVLARIL 79
Query: 85 AAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLL 144
A+F + K D +G Q I EL +T+++ L + A +
Sbjct: 80 QAVFSGVQA---KPGDSTYAEELGRQTAII---------ELATMTDRMRTLEMVVQAAPM 127
Query: 145 VGILGAVLGMMGFFQSIA---GYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKF 199
+G+LG V+GM+ F ++A G +++ GI +L + GL +++ + N F
Sbjct: 128 LGLLGTVIGMIDAFSALAVAEGAVDPTILA-AGIYTALTTTAAGLAIALVAYFVANYF 184
>gi|108563796|ref|YP_628112.1| biopolymer transport protein [Helicobacter pylori HPAG1]
gi|207092094|ref|ZP_03239881.1| biopolymer transport protein [Helicobacter pylori HPKX_438_AG0C1]
gi|208435313|ref|YP_002266979.1| biopolymer transport protein [Helicobacter pylori G27]
gi|254779956|ref|YP_003058063.1| Biopolymer transport protein ExbD/TolR; putative membrane protein
[Helicobacter pylori B38]
gi|308183540|ref|YP_003927667.1| biopolymer transport protein [Helicobacter pylori PeCan4]
gi|308185208|ref|YP_003929341.1| biopolymer transport protein [Helicobacter pylori SJM180]
gi|107837569|gb|ABF85438.1| biopolymer transport protein [Helicobacter pylori HPAG1]
gi|208433242|gb|ACI28113.1| biopolymer transport protein [Helicobacter pylori G27]
gi|254001869|emb|CAX30119.1| Biopolymer transport protein ExbD/TolR; putative membrane protein
[Helicobacter pylori B38]
gi|308061128|gb|ADO03024.1| biopolymer transport protein [Helicobacter pylori SJM180]
gi|308065725|gb|ADO07617.1| biopolymer transport protein [Helicobacter pylori PeCan4]
gi|317013211|gb|ADU83819.1| biopolymer transport protein [Helicobacter pylori Lithuania75]
gi|317182650|dbj|BAJ60434.1| biopolymer transport protein [Helicobacter pylori F57]
Length = 150
Score = 36.6 bits (83), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 55/110 (50%), Gaps = 11/110 (10%)
Query: 112 RIDRMMDVAIARELE-EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
R+D D R+LE + ++L+ + ++ S +G+LG V+G+M F + S + +
Sbjct: 35 RVDDYTD---RRKLELALHKRLTLVATIGSNAPYIGLLGTVMGIMLTFMDLG---SASGI 88
Query: 171 SIPGIIESLISIL----LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANE 216
I+ +L L +GL V+IP+ + YN + S+ + + F +
Sbjct: 89 DTKAIMTNLALALKATGMGLLVAIPAIVIYNLLVRKSEILVTKWDIFHHP 138
>gi|210135612|ref|YP_002302051.1| biopolymer transport protein ExbB [Helicobacter pylori P12]
gi|210133580|gb|ACJ08571.1| biopolymer transport protein ExbB [Helicobacter pylori P12]
Length = 150
Score = 36.6 bits (83), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 55/110 (50%), Gaps = 11/110 (10%)
Query: 112 RIDRMMDVAIARELE-EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
R+D D R+LE + ++L+ + ++ S +G+LG V+G+M F + S + +
Sbjct: 35 RVDDYTD---RRKLELALHKRLTLVATIGSNAPYIGLLGTVMGIMLTFMDLG---SASGI 88
Query: 171 SIPGIIESLISIL----LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANE 216
I+ +L L +GL V+IP+ + YN + S+ + + F +
Sbjct: 89 DTKAIMTNLALALKATGMGLLVAIPAIVIYNLLVRKSEILVTKWDIFHHP 138
>gi|84516787|ref|ZP_01004145.1| MotA/TolQ/ExbB proton channel family protein [Loktanella
vestfoldensis SKA53]
gi|84509255|gb|EAQ05714.1| MotA/TolQ/ExbB proton channel family protein [Loktanella
vestfoldensis SKA53]
Length = 207
Score = 36.6 bits (83), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 3/86 (3%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSN 167
+D DR+ +A AR L + L ++ L+G+ G VLGM+ F+++ AG +
Sbjct: 91 RDARDRLYTLAEAR-LARLEAGFRLLDGVAQTAPLLGLFGTVLGMIAAFRAMQDAGQSVD 149
Query: 168 NVVSIPGIIESLISILLGLCVSIPSS 193
V GI +L++ GL V++P S
Sbjct: 150 PSVLAGGIWVALMTTAAGLAVAMPLS 175
>gi|84499344|ref|ZP_00997632.1| biopolymer transport exbB protein [Oceanicola batsensis HTCC2597]
gi|84392488|gb|EAQ04699.1| biopolymer transport exbB protein [Oceanicola batsensis HTCC2597]
Length = 216
Score = 36.6 bits (83), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 40/68 (58%), Gaps = 2/68 (2%)
Query: 134 FLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGLCVSIP 191
L S++ L+G+ G VLGM+ FQ++ AG + V GI +L++ +GL V++P
Sbjct: 112 LLDSVAQLAPLLGLFGTVLGMISAFQAMQEAGSQVDPSVLAGGIWVALLTTAVGLAVAMP 171
Query: 192 SSIAYNKF 199
+++ + F
Sbjct: 172 TALVLSWF 179
>gi|212635977|ref|YP_002312502.1| MotA/TolQ/ExbB proton channel [Shewanella piezotolerans WP3]
gi|212557461|gb|ACJ29915.1| MotA/TolQ/ExbB proton channel [Shewanella piezotolerans WP3]
Length = 451
Score = 36.6 bits (83), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 51/96 (53%), Gaps = 1/96 (1%)
Query: 117 MDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII 176
+D AI +E + ++S + +++ ++G+LG V GM+ FQSI + + + + G I
Sbjct: 340 LDEAILKETPALETRISIIKVLAAIAPMMGLLGTVTGMIATFQSIQLFGTGDPKLMAGGI 399
Query: 177 E-SLISILLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
+L++ + GL ++P + + I SK +E
Sbjct: 400 SMALMTTVQGLVAALPLMLMHAVVIARSKSIVQVLE 435
>gi|329963085|ref|ZP_08300865.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Bacteroides fluxus YIT 12057]
gi|328529126|gb|EGF56056.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Bacteroides fluxus YIT 12057]
Length = 238
Score = 36.6 bits (83), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 53/105 (50%), Gaps = 2/105 (1%)
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI--PGIIESLIS 181
E+ ++ + ++ + ++S ++G LG V GM+ F +A +N +++ GI E++I+
Sbjct: 134 EVAKLEKGMTIMATISGGAPMLGFLGTVTGMVRAFWEMANAGNNIDITMLSGGIYEAMIT 193
Query: 182 ILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+ GL V I + AYN + +ME F +L+ +
Sbjct: 194 TVGGLIVGIIAMFAYNYLVTLIDGVVNKMEAKTMAFMDLLNEPAK 238
>gi|92116342|ref|YP_576071.1| MotA/TolQ/ExbB proton channel [Nitrobacter hamburgensis X14]
gi|91799236|gb|ABE61611.1| outer membrane transport energization protein ExbB [Nitrobacter
hamburgensis X14]
Length = 142
Score = 36.6 bits (83), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISILLG 185
E+T++L + S++S +G+LG VLG+M F +++ + +V I G+ +L + +G
Sbjct: 53 ELTKRLLVVASVASNAPYIGLLGTVLGIMLTFYNMSLDAAADVTKIMLGLALALKATAVG 112
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQME 211
L V++ S YN + K ++ E
Sbjct: 113 LVVALISVAIYNALLRKVKVLMLRWE 138
>gi|308064202|gb|ADO06089.1| biopolymer transport protein [Helicobacter pylori Sat464]
Length = 150
Score = 36.6 bits (83), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 55/110 (50%), Gaps = 11/110 (10%)
Query: 112 RIDRMMDVAIARELE-EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
R+D D R+LE + ++L+ + ++ S +G+LG V+G+M F + S + +
Sbjct: 35 RVDDYTD---RRKLELALHKRLTLVATIGSNAPYIGLLGTVMGIMLTFMDLG---SASGI 88
Query: 171 SIPGIIESLISIL----LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANE 216
I+ +L L +GL V+IP+ + YN + S+ + + F +
Sbjct: 89 DTKAIMTNLALALKATGMGLLVAIPAIVIYNLLVRKSEILVTKWDIFHHP 138
>gi|317010183|gb|ADU80763.1| biopolymer transport protein [Helicobacter pylori India7]
gi|317179621|dbj|BAJ57409.1| biopolymer transport protein [Helicobacter pylori F30]
Length = 150
Score = 36.6 bits (83), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 55/110 (50%), Gaps = 11/110 (10%)
Query: 112 RIDRMMDVAIARELE-EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
R+D D R+LE + ++L+ + ++ S +G+LG V+G+M F + S + +
Sbjct: 35 RVDDYTD---RRKLELALHKRLTLVATIGSNAPYIGLLGTVMGIMLTFMDLG---SASGI 88
Query: 171 SIPGIIESLISIL----LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANE 216
I+ +L L +GL V+IP+ + YN + S+ + + F +
Sbjct: 89 DTKAIMTNLALALKATGMGLLVAIPAIVIYNLLVRKSEILVTKWDIFHHP 138
>gi|260881417|ref|ZP_05893427.1| MotA/TolQ/ExbB proton channel family protein [Mitsuokella multacida
DSM 20544]
gi|260848894|gb|EEX68901.1| MotA/TolQ/ExbB proton channel family protein [Mitsuokella multacida
DSM 20544]
Length = 213
Score = 36.6 bits (83), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 89/189 (47%), Gaps = 18/189 (9%)
Query: 27 IITLLFIFSILSWSVIIQKSVNFITLR--RQF-REFEQLFWSGQSLETVCKSLKNHHNIG 83
++ +L + S+ S+ I++++ F + R F R+F +G+ + + L +
Sbjct: 17 VMYVLLLCSLFVLSIGIERALYFRRMDSGRAFARDFYLALANGKRQQ--AEKLADDARGA 74
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
LA I + +++ K K + + +Q I L ++ ++L +L + +
Sbjct: 75 LADILFAVITK-KPEARKNPATYMEVQSGI----------ALAKLRKRLYYLSVIVTMAP 123
Query: 144 LVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISILLGLCVSIPSSIAYNKFIED 202
L+G+LG + GM+ F S+ S +I G+ E+LI+ +GLCV+I + + F +
Sbjct: 124 LLGLLGTISGMITSF-SVFNLESGQATAITGGVGEALIATAMGLCVAIIALTVHAYFSQR 182
Query: 203 SKKFAMQME 211
+ ME
Sbjct: 183 IENIVTDME 191
>gi|15612403|ref|NP_224056.1| biopolymer transport protein [Helicobacter pylori J99]
gi|9910668|sp|Q9ZJH1|EXBL2_HELPJ RecName: Full=Putative biopolymer transport protein exbB-like 2
gi|4155948|gb|AAD06914.1| BIOPOLYMER TRANSPORT PROTEIN [Helicobacter pylori J99]
gi|307638096|gb|ADN80546.1| biopolymer transport protein [Helicobacter pylori 908]
gi|317014857|gb|ADU82293.1| biopolymer transport protein [Helicobacter pylori Gambia94/24]
gi|325996697|gb|ADZ52102.1| Ferric siderophore transport system/ biopolymer transport protein
[Helicobacter pylori 2018]
gi|325998289|gb|ADZ50497.1| Biopolymer transport protein [Helicobacter pylori 2017]
Length = 150
Score = 36.6 bits (83), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 55/110 (50%), Gaps = 11/110 (10%)
Query: 112 RIDRMMDVAIARELE-EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
R+D D R+LE + ++L+ + ++ S +G+LG V+G+M F + S + +
Sbjct: 35 RVDDYTD---RRKLELALHKRLTLVATIGSNAPYIGLLGTVMGIMLTFMDLG---SASGI 88
Query: 171 SIPGIIESLISIL----LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANE 216
I+ +L L +GL V+IP+ + YN + S+ + + F +
Sbjct: 89 DTKAIMTNLALALKATGMGLLVAIPAIVIYNLLVRKSEILVTKWDIFHHP 138
>gi|15646054|ref|NP_208236.1| biopolymer transport protein (exbB) [Helicobacter pylori 26695]
gi|3913602|sp|O25986|EXBL2_HELPY RecName: Full=Putative biopolymer transport protein exbB-like 2
gi|2314617|gb|AAD08483.1| biopolymer transport protein (exbB) [Helicobacter pylori 26695]
Length = 150
Score = 36.6 bits (83), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 55/110 (50%), Gaps = 11/110 (10%)
Query: 112 RIDRMMDVAIARELE-EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
R+D D R+LE + ++L+ + ++ S +G+LG V+G+M F + S + +
Sbjct: 35 RVDDYTD---RRKLELALHKRLTLVATIGSNAPYIGLLGTVMGIMLTFMDLG---SASGI 88
Query: 171 SIPGIIESLISIL----LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANE 216
I+ +L L +GL V+IP+ + YN + S+ + + F +
Sbjct: 89 DTKAIMTNLALALKATGMGLLVAIPAIVIYNLLVRKSEILVTKWDIFHHP 138
>gi|223038906|ref|ZP_03609198.1| TonB-system energizer ExbB [Campylobacter rectus RM3267]
gi|222879879|gb|EEF14968.1| TonB-system energizer ExbB [Campylobacter rectus RM3267]
Length = 146
Score = 36.6 bits (83), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 44/72 (61%), Gaps = 4/72 (5%)
Query: 124 ELE-EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLI 180
ELE ++T L+ +G + S VG+LG V+G++ F + +G + + + + G+ +L
Sbjct: 51 ELETDVTRNLTCIGVIGSNAPYVGLLGTVIGIIITFYDMGQSGNFETSTI-MTGLSIALK 109
Query: 181 SILLGLCVSIPS 192
+ LGLCV+IPS
Sbjct: 110 ATALGLCVAIPS 121
>gi|182679966|ref|YP_001834112.1| tonB-system energizer ExbB [Beijerinckia indica subsp. indica ATCC
9039]
gi|182635849|gb|ACB96623.1| tonB-system energizer ExbB [Beijerinckia indica subsp. indica ATCC
9039]
Length = 142
Score = 36.6 bits (83), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+T++L + S++S +G+LG VLG+M F ++ + + I G+ +L + +GL
Sbjct: 54 LTKRLIVVASVASNAPYIGLLGTVLGIMLTFYNMNLEANADAGKIMVGLALALKATAVGL 113
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQME 211
V++ S +AYN + +K +Q E
Sbjct: 114 IVALVSVVAYNGLVRKAKVLMLQWE 138
>gi|330831692|ref|YP_004394644.1| TonB system biopolymer transport component [Aeromonas veronii B565]
gi|328806828|gb|AEB52027.1| TonB system biopolymer transport component [Aeromonas veronii B565]
Length = 176
Score = 36.6 bits (83), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 29/138 (21%), Positives = 61/138 (44%), Gaps = 9/138 (6%)
Query: 81 NIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSS 140
N+G + + W+ ++ + I+ R +A+ E+ L F+ ++
Sbjct: 42 NLGFGPLQQQLLGRWQARSERHSWHARAIRSRW-------LAQAELELNRHLIFIRTLVV 94
Query: 141 AGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISILLGLCVSIPSSIAYNKF 199
++G+LG V GM+G F ++A N S+ GI + I + G+ V++ + ++
Sbjct: 95 LCPMLGLLGTVTGMIGVFDALAAANRFNPESMAGGISRATIPTMAGMVVALSGVLLLSRL 154
Query: 200 IEDSKK-FAMQMEGFANE 216
+K+ A +G E
Sbjct: 155 ESQAKRALAKTRDGLREE 172
>gi|262171435|ref|ZP_06039113.1| MotA/TolQ/ExbB proton channel family protein [Vibrio mimicus
MB-451]
gi|261892511|gb|EEY38497.1| MotA/TolQ/ExbB proton channel family protein [Vibrio mimicus
MB-451]
Length = 458
Score = 36.6 bits (83), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 56/114 (49%), Gaps = 13/114 (11%)
Query: 97 KSCDKGARSPIGI--------QDRIDRMMDV----AIARELEEITEKLSFLGSMSSAGLL 144
K+ D+ +P+G Q R +++ A+ E + LS L +++ +
Sbjct: 303 KNPDQPGNNPLGRILAVYNKEQQRSVEALELRLLEAVVDEQNHLETGLSMLKLLAALAPM 362
Query: 145 VGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYN 197
+G+LG V GM+ FQ I + + + V GI +L++ + GL +IP +A+N
Sbjct: 363 LGLLGTVTGMIETFQVITQFGNGDPKVMAGGISMALVTTVEGLIAAIPLLLAHN 416
>gi|146298224|ref|YP_001192815.1| MotA/TolQ/ExbB proton channel [Flavobacterium johnsoniae UW101]
gi|146152642|gb|ABQ03496.1| MotA/TolQ/ExbB proton channel [Flavobacterium johnsoniae UW101]
Length = 230
Score = 36.6 bits (83), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 61/120 (50%), Gaps = 6/120 (5%)
Query: 106 PIG-IQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGY 164
PI I+ +DR D+ E+ E+ +L LG ++ +G +G + G++ F SI+
Sbjct: 114 PIAEIESNMDRAADI----EIGEMERRLGHLGLIAGIAPTLGFIGTISGVIKIFYSISVT 169
Query: 165 YSNNVVSIPG-IIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
+ ++ +I G + E +IS GL V I + AY+ FA++++ EF I+ R
Sbjct: 170 ENISIGNISGGLYEKMISSGSGLIVGIIAYSAYHLLNGKIDDFALKIQKQILEFVNIIQR 229
>gi|332674212|gb|AEE71029.1| TonB-system energizer ExbB [Helicobacter pylori 83]
Length = 150
Score = 36.6 bits (83), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 55/110 (50%), Gaps = 11/110 (10%)
Query: 112 RIDRMMDVAIARELE-EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
R+D D R+LE + ++L+ + ++ S +G+LG V+G+M F + S + +
Sbjct: 35 RVDDYTD---RRKLELALHKRLTLVATIGSNAPYIGLLGTVMGIMLTFMDLG---SASGI 88
Query: 171 SIPGIIESLISIL----LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANE 216
I+ +L L +GL V+IP+ + YN + S+ + + F +
Sbjct: 89 DTKAIMTNLALALKATGMGLLVAIPAIVIYNLLVRKSEILVTKWDIFHHP 138
>gi|261253062|ref|ZP_05945635.1| MotA/TolQ/ExbB proton channel family protein [Vibrio orientalis CIP
102891]
gi|260936453|gb|EEX92442.1| MotA/TolQ/ExbB proton channel family protein [Vibrio orientalis CIP
102891]
Length = 451
Score = 36.6 bits (83), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Query: 115 RMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIP 173
R+++ A+ E + + LS L +++ ++G+LG V GM+ FQ I + + + V
Sbjct: 329 RLLE-AVVDEQTGLEKGLSMLKLLAALAPMLGLLGTVTGMIETFQVITQFGNGDPKVMAG 387
Query: 174 GIIESLISILLGLCVSIPSSIAYN 197
GI +L++ +LGL ++P +A+N
Sbjct: 388 GISMALVTTVLGLIAAMPLLLAHN 411
>gi|217033924|ref|ZP_03439348.1| hypothetical protein HP9810_870g56 [Helicobacter pylori 98-10]
gi|216943687|gb|EEC23132.1| hypothetical protein HP9810_870g56 [Helicobacter pylori 98-10]
Length = 150
Score = 36.6 bits (83), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 55/110 (50%), Gaps = 11/110 (10%)
Query: 112 RIDRMMDVAIARELE-EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
R+D D R+LE + ++L+ + ++ S +G+LG V+G+M F + S + +
Sbjct: 35 RVDDYTD---RRKLELALHKRLTLVATIGSNAPYIGLLGTVIGIMLTFMDLG---SASGI 88
Query: 171 SIPGIIESLISIL----LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANE 216
I+ +L L +GL V+IP+ + YN + S+ + + F +
Sbjct: 89 DTKAIMTNLALALKATGMGLLVAIPAIVIYNLLVRKSEILVTKWDIFHHP 138
>gi|330953146|gb|EGH53406.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae Cit 7]
Length = 82
Score = 36.6 bits (83), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 27/45 (60%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
+ LL IFS+++W++++ K+ L RQ R + FW+ + L+
Sbjct: 1 MALLVIFSLVTWALLLGKTFQHWRLTRQNRRYATQFWAARDLKNA 45
>gi|296123995|ref|YP_003631773.1| MotA/TolQ/ExbB proton channel [Planctomyces limnophilus DSM 3776]
gi|296016335|gb|ADG69574.1| MotA/TolQ/ExbB proton channel [Planctomyces limnophilus DSM 3776]
Length = 268
Score = 36.6 bits (83), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 55/110 (50%), Gaps = 6/110 (5%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
+D IDR ++ +A E+E+ L+ +GS+ G L+G+LG + GM+ F IA +
Sbjct: 147 RDSIDRHGEL-VAVEMEKQISMLAVIGSL---GPLIGLLGTLKGMIASFSVIAMSETQMK 202
Query: 170 VS--IPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEF 217
S GI E+L+ G+ +S+P+ + F ++ ANE
Sbjct: 203 ASEVAGGISEALLITFEGVALSVPAIFFFALFRNRVATLSLGAVSAANEL 252
>gi|298527875|ref|ZP_07015279.1| MotA/TolQ/ExbB proton channel [Desulfonatronospira thiodismutans
ASO3-1]
gi|298511527|gb|EFI35429.1| MotA/TolQ/ExbB proton channel [Desulfonatronospira thiodismutans
ASO3-1]
Length = 209
Score = 36.6 bits (83), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 53/116 (45%), Gaps = 4/116 (3%)
Query: 115 RMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQ---SIAGYYSNNVVS 171
+ M+ A E++ + L +M + L+GILG V+G++ F G V+
Sbjct: 88 KAMESAAGEEIKRMQRFNGVLDTMITVAPLLGILGTVIGIIHSFDILGQTGGIEEPREVT 147
Query: 172 IPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEG 227
GI ++LI+ GL ++I + + F + A ME +A + +Q +G
Sbjct: 148 -AGIAQALITTATGLVIAILALFPFKFFSSRVEDAAAIMERYATSLEIVHEKQQQG 202
>gi|189912932|ref|YP_001964821.1| TolQ-like transport protein [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167777608|gb|ABZ95908.1| TolQ-like transport protein [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
Length = 219
Score = 36.6 bits (83), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 91/203 (44%), Gaps = 21/203 (10%)
Query: 25 KCIITLLFIFSILSWSVIIQKSVNFITLRRQF-REFEQLFWS------GQSLETVCKSLK 77
K I ++ + SIL+ +V I++ I +R F +E E L S + L+ K L+
Sbjct: 10 KIIFLVMLLASILAIAVFIER---LIVYKRNFNKESESLLDSLTLLIRHRDLKGTEKLLE 66
Query: 78 NHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGS 137
+H F+ + E +K KG + +M+ I +E + E+L L +
Sbjct: 67 SHPMENSYTRFIHFVLEREKENHKG----------LSELMEGKILKEKLSLEERLPILNT 116
Query: 138 MSSAGLLVGILGAVLGMMGFFQSIAGY-YSNNVVSIPGIIESLISILLGLCVSIPSSIAY 196
+ + +G+LG VLG++ F + S V + I +L++ GL V+IP +A
Sbjct: 117 LGNNTPFIGLLGTVLGVIKAFYGLGTLGNSGAEVVMRSISTALLATAAGLAVAIPVVMAN 176
Query: 197 NKFIEDSKKFAMQMEGFANEFSA 219
N F K Q+E + E A
Sbjct: 177 NYFTRKMKLVIGQLEILSKEIHA 199
>gi|315453287|ref|YP_004073557.1| Biopolymer transport protein ExbB/tolQ family transport protein
[Helicobacter felis ATCC 49179]
gi|315132339|emb|CBY82967.1| Biopolymer transport protein ExbB/tolQ family transport protein
[Helicobacter felis ATCC 49179]
Length = 149
Score = 36.6 bits (83), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 49/94 (52%), Gaps = 10/94 (10%)
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFF----QSIAGYYSNNVVSIPGIIESLISI 182
++T+ L+ L + S VG+LG +LG+M F S+ G + + G+ +L +
Sbjct: 57 DLTKNLTMLYIIYSNAPYVGLLGTILGVMVTFYDMSTSVTGLDAKAITL--GLSLALKAT 114
Query: 183 LLGLCVSIPSSIAYNKFIED----SKKFAMQMEG 212
GL V+IP+ I YN F+ S++F + +G
Sbjct: 115 AFGLLVAIPTLIVYNAFLRKVDILSERFRLYQKG 148
>gi|189913257|ref|YP_001964486.1| Putative MotA/TolQ/ExbB proton channel protein [Leptospira biflexa
serovar Patoc strain 'Patoc 1 (Paris)']
gi|167781325|gb|ABZ99622.1| Putative MotA/TolQ/ExbB proton channel protein [Leptospira biflexa
serovar Patoc strain 'Patoc 1 (Paris)']
Length = 248
Score = 36.6 bits (83), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 91/203 (44%), Gaps = 21/203 (10%)
Query: 25 KCIITLLFIFSILSWSVIIQKSVNFITLRRQF-REFEQLFWS------GQSLETVCKSLK 77
K I ++ + SIL+ +V I++ I +R F +E E L S + L+ K L+
Sbjct: 39 KIIFLVMLLASILAIAVFIER---LIVYKRNFNKESESLLDSLTLLIRHRDLKGTEKLLE 95
Query: 78 NHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGS 137
+H F+ + E +K KG + +M+ I +E + E+L L +
Sbjct: 96 SHPMENSYTRFIHFVLEREKENHKG----------LSELMEGKILKEKLSLEERLPILNT 145
Query: 138 MSSAGLLVGILGAVLGMMGFFQSIAGY-YSNNVVSIPGIIESLISILLGLCVSIPSSIAY 196
+ + +G+LG VLG++ F + S V + I +L++ GL V+IP +A
Sbjct: 146 LGNNTPFIGLLGTVLGVIKAFYGLGTLGNSGAEVVMRSISTALLATAAGLAVAIPVVMAN 205
Query: 197 NKFIEDSKKFAMQMEGFANEFSA 219
N F K Q+E + E A
Sbjct: 206 NYFTRKMKLVIGQLEILSKEIHA 228
>gi|294053814|ref|YP_003547472.1| MotA/TolQ/ExbB proton channel [Coraliomargarita akajimensis DSM
45221]
gi|293613147|gb|ADE53302.1| MotA/TolQ/ExbB proton channel [Coraliomargarita akajimensis DSM
45221]
Length = 253
Score = 36.6 bits (83), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 63/127 (49%), Gaps = 13/127 (10%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA--GYYSNN 168
+ +++ + A +REL +++L +S+ +VG+LG V GM+ F SIA G
Sbjct: 127 EALEKAFETASSRELASAYVVVNYLSIISAIAPMVGLLGTVSGMVKAFNSIAAEGMGKPE 186
Query: 169 VVSIPGIIESLISILLGLCVSIPSSIA-------YNKFIEDSKKFAMQMEGFANEFSAIL 221
+++ I E+LI+ G+ ++IP+ Y K + + Q+ G + +
Sbjct: 187 LLA-DNISEALITTASGMAIAIPAMFFFFFFRNRYGKIVSEVNLVLGQLYG---QLLHVG 242
Query: 222 SRQTEGN 228
+RQ EG+
Sbjct: 243 NRQGEGH 249
>gi|257458274|ref|ZP_05623423.1| MotA/TolQ/ExbB proton channel [Treponema vincentii ATCC 35580]
gi|257444301|gb|EEV19395.1| MotA/TolQ/ExbB proton channel [Treponema vincentii ATCC 35580]
Length = 229
Score = 36.6 bits (83), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 44/90 (48%), Gaps = 5/90 (5%)
Query: 135 LGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI--PGIIESLISILLGLCVSIPS 192
L +++ L+G+LG V G+M FQ IA + +++ GI E++I+ GL +I S
Sbjct: 121 LSRIAAVAPLLGLLGTVTGLMAAFQKIAALGGSVDIAVLSGGIWEAMITTATGLVTAIFS 180
Query: 193 SIAYNKFIEDSKKFAMQME---GFANEFSA 219
Y F S + ME NEF A
Sbjct: 181 FAVYELFDWVSTRRVRDMEQLISVLNEFHA 210
>gi|57505501|ref|ZP_00371429.1| probable exbB/tolQ family transport protein Cj1628 [Campylobacter
upsaliensis RM3195]
gi|57016326|gb|EAL53112.1| probable exbB/tolQ family transport protein Cj1628 [Campylobacter
upsaliensis RM3195]
Length = 161
Score = 36.6 bits (83), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISILLGL 186
I+E L+ L + S +G+LG V+G+M F + +V SI G+ +L + LGL
Sbjct: 72 ISENLTILYIIYSNAPYIGLLGTVIGIMMTFYEMGVVGDIDVKSIVIGLSLALKATALGL 131
Query: 187 CVSIPSSIAYNKFIE 201
V+IPS +AYN +
Sbjct: 132 LVAIPSLMAYNALLR 146
>gi|198283045|ref|YP_002219366.1| MotA/TolQ/ExbB proton channel [Acidithiobacillus ferrooxidans ATCC
53993]
gi|218665860|ref|YP_002425256.1| MotA/TolQ/ExbB proton channel family protein [Acidithiobacillus
ferrooxidans ATCC 23270]
gi|198247566|gb|ACH83159.1| MotA/TolQ/ExbB proton channel [Acidithiobacillus ferrooxidans ATCC
53993]
gi|218518073|gb|ACK78659.1| MotA/TolQ/ExbB proton channel family protein [Acidithiobacillus
ferrooxidans ATCC 23270]
Length = 234
Score = 36.6 bits (83), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 47/95 (49%)
Query: 117 MDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII 176
+D AI + ++L L ++ + L+G+ G +LGM F +A N G+
Sbjct: 105 LDEAIFLTTPSLDKRLWILDTIVTLAPLLGLFGTILGMFHAFSILAAPGHNPASVTGGVA 164
Query: 177 ESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
++LI+ GL +++ +++N F +K Q+E
Sbjct: 165 DALIATASGLFIAMIGLLSFNAFNNAIEKTIFQLE 199
>gi|157368848|ref|YP_001476837.1| MotA/TolQ/ExbB proton channel [Serratia proteamaculans 568]
gi|157320612|gb|ABV39709.1| MotA/TolQ/ExbB proton channel [Serratia proteamaculans 568]
Length = 217
Score = 36.6 bits (83), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 78/153 (50%), Gaps = 14/153 (9%)
Query: 41 VIIQKSVNFITLRRQFREFEQ-LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSC 99
+II++++ F +RQ R EQ L + + L +++ LA I S + E K
Sbjct: 25 IIIERALYFAYTQRQARRLEQALTLDVRRTADLPDELTQRNSLPLAVI--SPVLEQKHRA 82
Query: 100 DKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQ 159
G R IG D ID +++ L + L L ++ +A L+G+LG V+G++ F+
Sbjct: 83 --GDREAIG--DLID--AQYLLSKPL--MARGLWLLETIVTAAPLLGLLGTVMGIIETFK 134
Query: 160 SIA--GYYSNNVVSIPGIIESLISILLGLCVSI 190
++A G ++VS G+ +L + LG+ +++
Sbjct: 135 ALAASGVSEPSLVSA-GMGTALYATGLGIAIAL 166
>gi|325282819|ref|YP_004255360.1| MotA/TolQ/ExbB proton channel [Deinococcus proteolyticus MRP]
gi|324314628|gb|ADY25743.1| MotA/TolQ/ExbB proton channel [Deinococcus proteolyticus MRP]
Length = 231
Score = 36.6 bits (83), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 52/108 (48%), Gaps = 1/108 (0%)
Query: 117 MDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGI 175
M+ A+ E I L+ LG+ + L+G+LG V+GM+ F + + + GI
Sbjct: 93 MNSALLAEDSRIYAGLNALGTAAQIAPLLGLLGTVIGMVRSFLVFSAASNPTPAELGQGI 152
Query: 176 IESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
E+LI+ GL V+I + +A N + + A E E + L+R
Sbjct: 153 SEALINTAGGLVVAILAYLARNALRAQADRIATAAERVREEVPSWLTR 200
>gi|255534572|ref|YP_003094943.1| MotA/TolQ/ExbB proton channel family protein [Flavobacteriaceae
bacterium 3519-10]
gi|255340768|gb|ACU06881.1| MotA/TolQ/ExbB proton channel family protein [Flavobacteriaceae
bacterium 3519-10]
Length = 287
Score = 36.6 bits (83), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 49/90 (54%), Gaps = 4/90 (4%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI---AGYYSNNV 169
+++ ++ A E+ + + + L ++ + LV +LG V+GM+ F ++ G +
Sbjct: 173 LNKSIEEATTLEMPMLEKNMMILSTLGTVATLVALLGTVIGMIKAFNALGSGGGTPDSAA 232
Query: 170 VSIPGIIESLISILLGLCVSIPSSIAYNKF 199
+SI GI E+LI+ LG+ S + I YN F
Sbjct: 233 LSI-GISEALINTALGIGTSAVAIIFYNYF 261
>gi|304436788|ref|ZP_07396756.1| MotA/TolQ/ExbB proton channel family protein [Selenomonas sp. oral
taxon 149 str. 67H29BP]
gi|304370268|gb|EFM23925.1| MotA/TolQ/ExbB proton channel family protein [Selenomonas sp. oral
taxon 149 str. 67H29BP]
Length = 230
Score = 36.6 bits (83), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 53/102 (51%), Gaps = 2/102 (1%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
DR+ M++ L ++ ++ +L + + L+G+LG + GM+ F S+ +
Sbjct: 100 DRMSAYMEIQSGIALSKMRRRIYYLSVIVTMAPLLGLLGTISGMITTF-SVFNIQAGEPA 158
Query: 171 SIP-GIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
+I GI E+LI+ +GLCV++ + + + F + + ME
Sbjct: 159 AITGGIGEALIATAMGLCVALVALMVHAYFSQRIENIVTDME 200
>gi|258624585|ref|ZP_05719523.1| biopolymer transport protein ExbB-related protein [Vibrio mimicus
VM603]
gi|258583132|gb|EEW07943.1| biopolymer transport protein ExbB-related protein [Vibrio mimicus
VM603]
Length = 458
Score = 36.6 bits (83), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 56/114 (49%), Gaps = 13/114 (11%)
Query: 97 KSCDKGARSPIGI--------QDRIDRMMDV----AIARELEEITEKLSFLGSMSSAGLL 144
K+ D+ +P+G Q R +++ A+ E + LS L +++ +
Sbjct: 303 KNPDQPGNNPLGRILAVYNKEQQRSVEALELRLLEAVVDEQNHLETGLSMLKLLAALAPM 362
Query: 145 VGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYN 197
+G+LG V GM+ FQ I + + + V GI +L++ + GL +IP +A+N
Sbjct: 363 LGLLGTVTGMIETFQVITQFGNGDPKVMAGGISMALVTTVEGLIAAIPLLLAHN 416
>gi|188528215|ref|YP_001910902.1| biopolymer transport protein [Helicobacter pylori Shi470]
gi|188144455|gb|ACD48872.1| biopolymer transport protein [Helicobacter pylori Shi470]
Length = 150
Score = 36.6 bits (83), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 54/107 (50%), Gaps = 5/107 (4%)
Query: 112 RIDRMMDVAIARELE-EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
R+D D R+LE + ++L+ + ++ S +G+LG V+G+M F + +
Sbjct: 35 RVDDYTD---RRKLELALHKRLTLVATIGSNAPYIGLLGTVMGIMLTFMDLGAASGIDTK 91
Query: 171 SI-PGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANE 216
+I + +L + +GL V+IP+ + YN + S+ + + F +
Sbjct: 92 AIMTNLALALKATGMGLLVAIPAIVIYNFLVRKSEILVTKWDIFHHP 138
>gi|320104668|ref|YP_004180259.1| MotA/TolQ/ExbB proton channel [Isosphaera pallida ATCC 43644]
gi|319751950|gb|ADV63710.1| MotA/TolQ/ExbB proton channel [Isosphaera pallida ATCC 43644]
Length = 231
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 94/229 (41%), Gaps = 31/229 (13%)
Query: 9 MDISIFALFMQ-MGLAVKCIITLLFIFSILSWSVIIQKSVN--FITLRRQFREFEQLFWS 65
MDI + + G + + +L + I +W V+I + +N ++ R F Q+ +
Sbjct: 1 MDIDTLSKIIDWFGYGIYGALAMLGAWGIYNW-VLIHRGINKRLLSDRAAFELLNQVEAA 59
Query: 66 GQSLETVCKSLK-----NHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVA 120
+T+ +++K + N L + A++ K K I +M +
Sbjct: 60 AGGGKTIDQAIKVCQTPKYWNTALGQLIAVALANRAKGLAK-----------IKSLMVME 108
Query: 121 IARELEEITE-KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESL 179
E+ + E +L+ +G++ G L+G+LG V M+ F I+G + P +
Sbjct: 109 FHTEIISVLEMRLASIGTIVRMGPLLGLLGTVASMIAAFARISGAEVD-----PKTLSGD 163
Query: 180 ISILL-----GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
IS+ L GL ++ P + N + + + E EF L R
Sbjct: 164 ISLALWATGSGLLIATPMMVVANHYHAKLRHLRDRTERQLQEFVERLER 212
>gi|148260193|ref|YP_001234320.1| MotA/TolQ/ExbB proton channel [Acidiphilium cryptum JF-5]
gi|146401874|gb|ABQ30401.1| outer membrane transport energization protein ExbB [Acidiphilium
cryptum JF-5]
Length = 223
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 50/101 (49%), Gaps = 1/101 (0%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
D +D ++ I + IT L L + + L+G+ G ++GM+ F ++ V
Sbjct: 89 DELDNHLEEEIMDAMPRITRGLWILDTAVTIAPLLGLFGTIIGMIQAFDVLSSNGGPAKV 148
Query: 171 SIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
+ GI ++L+S GL ++I + N F S++ +Q+E
Sbjct: 149 T-GGIADALVSTGAGLLIAIIAVYLVNYFNNLSRRIVLQLE 188
>gi|87118917|ref|ZP_01074816.1| biopolymer transport exbB protein [Marinomonas sp. MED121]
gi|86166551|gb|EAQ67817.1| biopolymer transport exbB protein [Marinomonas sp. MED121]
Length = 292
Score = 36.2 bits (82), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 91/180 (50%), Gaps = 18/180 (10%)
Query: 17 FMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQL---FWSGQSLETVC 73
F+Q G ++ +L +FS + ++I KS F++LR + + +L W E
Sbjct: 72 FLQTG---GPVVWILCLFSAFALTIIFLKSWQFVSLRAESNKDVKLALSHWRKVHPEQAI 128
Query: 74 KSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLS 133
+SLK + + + AM+E KS A +++ I+R+ D I + L+ L
Sbjct: 129 ESLKTKRPV--SDVVAYAMTELSKSDYDLAL----VKEEIERLADEKI-QALKAYLRPLE 181
Query: 134 FLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGLCVSIP 191
+ ++S +G+LG VLGM+ FQ++ AG + V GI ++L++ +GL V+IP
Sbjct: 182 VVATLSPL---LGLLGTVLGMIVAFQNMESAGSQVDPSVLSGGIWQALLTTAVGLAVAIP 238
>gi|262165742|ref|ZP_06033479.1| MotA/TolQ/ExbB proton channel family protein [Vibrio mimicus VM223]
gi|262025458|gb|EEY44126.1| MotA/TolQ/ExbB proton channel family protein [Vibrio mimicus VM223]
Length = 458
Score = 36.2 bits (82), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 56/114 (49%), Gaps = 13/114 (11%)
Query: 97 KSCDKGARSPIGI--------QDRIDRMMDV----AIARELEEITEKLSFLGSMSSAGLL 144
K+ D+ +P+G Q R +++ A+ E + LS L +++ +
Sbjct: 303 KNPDQPGNNPLGRILAVYNKEQQRSVEALELRLLEAVVDEQNHLETGLSMLKLLAALAPM 362
Query: 145 VGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYN 197
+G+LG V GM+ FQ I + + + V GI +L++ + GL +IP +A+N
Sbjct: 363 LGLLGTVTGMIETFQVITQFGNGDPKVMAGGISMALVTTVEGLIAAIPLLLAHN 416
>gi|261211672|ref|ZP_05925959.1| MotA/TolQ/ExbB proton channel family protein [Vibrio sp. RC341]
gi|260839022|gb|EEX65654.1| MotA/TolQ/ExbB proton channel family protein [Vibrio sp. RC341]
Length = 458
Score = 36.2 bits (82), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Query: 115 RMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIP 173
R+++ A+ E + LS L +++ ++G+LG V GM+ FQ I + + + V
Sbjct: 334 RLLE-AVVDEQNHLETGLSMLKLLAALAPMLGLLGTVTGMIETFQVITQFGNGDPKVMAG 392
Query: 174 GIIESLISILLGLCVSIPSSIAYN 197
GI +L++ + GL +IP +A+N
Sbjct: 393 GISMALVTTVEGLIAAIPLLLAHN 416
>gi|330947267|gb|EGH47979.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. pisi str.
1704B]
Length = 145
Score = 36.2 bits (82), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 61/139 (43%), Gaps = 3/139 (2%)
Query: 24 VKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIG 83
VK ++ L I SI++W++ I K + +R+ R +SL + +
Sbjct: 5 VKAVMIGLAIASIITWTIWISKGFELLGAKRRLRGEIANLKKARSLSEASATASTEGTLA 64
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
+ A+ E + S + +R GI++R+ ++ +A ++ L ++ S
Sbjct: 65 -HLLVHDALEEMRLSAN--SREREGIKERVSFRLERLVAACGRNMSMGTGVLATIGSTAP 121
Query: 144 LVGILGAVLGMMGFFQSIA 162
VG+ G V G+M F IA
Sbjct: 122 FVGLFGTVWGIMNSFIGIA 140
>gi|145301145|ref|YP_001143986.1| MotA/TolQ/ExbB proton channel [Aeromonas salmonicida subsp.
salmonicida A449]
gi|142853917|gb|ABO92238.1| MotA/TolQ/ExbB proton channel [Aeromonas salmonicida subsp.
salmonicida A449]
Length = 176
Score = 36.2 bits (82), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 29/138 (21%), Positives = 61/138 (44%), Gaps = 9/138 (6%)
Query: 81 NIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSS 140
N+G + + W+ ++ + I+ R +A+ E+ L F+ ++
Sbjct: 42 NLGFGPLQQQLLGRWQARSERHSWHARAIRGRW-------LAQAELELNRHLIFIRTLVV 94
Query: 141 AGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISILLGLCVSIPSSIAYNKF 199
++G+LG V GM+G F ++A N S+ GI + I + G+ V++ + ++
Sbjct: 95 LCPMLGLLGTVTGMIGVFDALAAANRFNPESMAGGISRATIPTMAGMVVALSGVLLLSRL 154
Query: 200 IEDSKK-FAMQMEGFANE 216
+K+ A +G E
Sbjct: 155 ESQAKRALAKTRDGLREE 172
>gi|15641555|ref|NP_231187.1| biopolymer transport protein ExbB-related protein [Vibrio cholerae
O1 biovar El Tor str. N16961]
gi|121587218|ref|ZP_01676992.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae
2740-80]
gi|121726921|ref|ZP_01680122.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae V52]
gi|153818886|ref|ZP_01971553.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae NCTC
8457]
gi|153823108|ref|ZP_01975775.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae B33]
gi|227081702|ref|YP_002810253.1| biopolymer transport protein [Vibrio cholerae M66-2]
gi|229508506|ref|ZP_04398009.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae BX
330286]
gi|229511424|ref|ZP_04400903.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae B33]
gi|229518563|ref|ZP_04408006.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae RC9]
gi|229607912|ref|YP_002878560.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae
MJ-1236]
gi|254848668|ref|ZP_05238018.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae MO10]
gi|255745016|ref|ZP_05418966.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholera CIRS
101]
gi|262161698|ref|ZP_06030716.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae INDRE
91/1]
gi|298498366|ref|ZP_07008173.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae MAK
757]
gi|9656053|gb|AAF94701.1| biopolymer transport protein ExbB-related protein [Vibrio cholerae
O1 biovar El Tor str. N16961]
gi|121548561|gb|EAX58615.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae
2740-80]
gi|121630683|gb|EAX63070.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae V52]
gi|126510556|gb|EAZ73150.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae NCTC
8457]
gi|126519363|gb|EAZ76586.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae B33]
gi|227009590|gb|ACP05802.1| biopolymer transport protein [Vibrio cholerae M66-2]
gi|229343252|gb|EEO08227.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae RC9]
gi|229351389|gb|EEO16330.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae B33]
gi|229354460|gb|EEO19383.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae BX
330286]
gi|229370567|gb|ACQ60990.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae
MJ-1236]
gi|254844373|gb|EET22787.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae MO10]
gi|255737487|gb|EET92882.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholera CIRS
101]
gi|262028430|gb|EEY47085.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae INDRE
91/1]
gi|297542699|gb|EFH78749.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae MAK
757]
Length = 457
Score = 36.2 bits (82), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Query: 115 RMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIP 173
R+++ A+ E + LS L +++ ++G+LG V GM+ FQ I + + + V
Sbjct: 333 RLLE-AVVDEQNHLETGLSMLKLLAALAPMLGLLGTVTGMIETFQVITQFGNGDPKVMAG 391
Query: 174 GIIESLISILLGLCVSIPSSIAYN 197
GI +L++ + GL +IP +A+N
Sbjct: 392 GISMALVTTVEGLIAAIPLLLAHN 415
>gi|315638833|ref|ZP_07894005.1| TonB family auxiliary protein ExbB [Campylobacter upsaliensis JV21]
gi|315481051|gb|EFU71683.1| TonB family auxiliary protein ExbB [Campylobacter upsaliensis JV21]
Length = 141
Score = 36.2 bits (82), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 48/92 (52%), Gaps = 5/92 (5%)
Query: 115 RMMDVAIARELEE----ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
R +D + E+ I+E L+ L + S +G+LG V+G+M F + +V
Sbjct: 35 RKLDFKAYKNQEQFDNAISENLTTLYIIYSNAPYIGLLGTVIGIMMTFYEMGVVGDIDVK 94
Query: 171 SIP-GIIESLISILLGLCVSIPSSIAYNKFIE 201
SI G+ +L + LGL V+IPS +AYN +
Sbjct: 95 SIVIGLSLALKATALGLLVAIPSLMAYNALLR 126
>gi|224418537|ref|ZP_03656543.1| TonB system transport protein ExbB [Helicobacter canadensis MIT
98-5491]
gi|253826909|ref|ZP_04869794.1| TonB system transport protein ExbB [Helicobacter canadensis MIT
98-5491]
gi|313142063|ref|ZP_07804256.1| TonB system transport protein ExbB [Helicobacter canadensis MIT
98-5491]
gi|253510315|gb|EES88974.1| TonB system transport protein ExbB [Helicobacter canadensis MIT
98-5491]
gi|313131094|gb|EFR48711.1| TonB system transport protein ExbB [Helicobacter canadensis MIT
98-5491]
Length = 145
Score = 36.2 bits (82), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILL 184
+ IT+ L+ L + S VG+LG V+G+M F + S + I G+ +L + L
Sbjct: 50 DAITKHLTTLYIIYSNAPYVGLLGTVIGIMITFYDMGMSGSIDTKEIMTGLSLALKATAL 109
Query: 185 GLCVSIPSSIAYN 197
GL V+IP+ IAYN
Sbjct: 110 GLAVAIPTLIAYN 122
>gi|254446067|ref|ZP_05059543.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Verrucomicrobiae bacterium DG1235]
gi|198260375|gb|EDY84683.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Verrucomicrobiae bacterium DG1235]
Length = 465
Score = 36.2 bits (82), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCVSI 190
++F+ ++A L+G+LG V GM+ F++I + + + ++ GI +LI+ GL V+I
Sbjct: 371 IAFIALTAAASPLLGLLGTVTGMIDTFKAITVFGTGDPATLSTGISVALITTEYGLIVAI 430
Query: 191 P 191
P
Sbjct: 431 P 431
>gi|237749557|ref|ZP_04580037.1| biopolymer transporter ExbB [Oxalobacter formigenes OXCC13]
gi|229380919|gb|EEO31010.1| biopolymer transporter ExbB [Oxalobacter formigenes OXCC13]
Length = 204
Score = 36.2 bits (82), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 42/80 (52%)
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIP 191
L+ +G++++ L+G+ G V+GM+ F S +N GI +L + GL +++P
Sbjct: 111 LTTIGTIATLAPLMGLFGTVVGMIEIFGSQNAGGANPAELAHGISVALYNTGFGLLIAMP 170
Query: 192 SSIAYNKFIEDSKKFAMQME 211
+ + Y F F ++ME
Sbjct: 171 TLVFYRHFRALVDSFLIEME 190
>gi|254785766|ref|YP_003073195.1| MotA/TolQ/ExbB proton channel [Teredinibacter turnerae T7901]
gi|237684969|gb|ACR12233.1| MotA/TolQ/ExbB proton channel [Teredinibacter turnerae T7901]
Length = 205
Score = 36.2 bits (82), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 20/87 (22%), Positives = 48/87 (55%), Gaps = 8/87 (9%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
++ I+ M+ I + ++ E+ +L ++++ L+G+LG ++G++ F ++A S +
Sbjct: 89 RELIESAMEEGIMEVVPQLEERTHYLATLANIATLLGLLGTIIGLIQAFTAVA---SADP 145
Query: 170 VSIPGIIESLISILL-----GLCVSIP 191
++ + IS+ + GLC +IP
Sbjct: 146 AEKADMLSASISVAMNTTAFGLCAAIP 172
>gi|229523634|ref|ZP_04413039.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae bv.
albensis VL426]
gi|229337215|gb|EEO02232.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae bv.
albensis VL426]
Length = 457
Score = 36.2 bits (82), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Query: 115 RMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIP 173
R+++ A+ E + LS L +++ ++G+LG V GM+ FQ I + + + V
Sbjct: 333 RLLE-AVVDEQNHLETGLSMLKLLAALAPMLGLLGTVTGMIETFQVITQFGNGDPKVMAG 391
Query: 174 GIIESLISILLGLCVSIPSSIAYN 197
GI +L++ + GL +IP +A+N
Sbjct: 392 GISMALVTTVEGLIAAIPLLLAHN 415
>gi|99080190|ref|YP_612344.1| MotA/TolQ/ExbB proton channel [Ruegeria sp. TM1040]
gi|99036470|gb|ABF63082.1| MotA/TolQ/ExbB proton channel [Ruegeria sp. TM1040]
Length = 226
Score = 36.2 bits (82), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 9/102 (8%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNN 168
DR D + +R + L FL ++ L+G+ G VLGM+ FQ + AG +
Sbjct: 105 DRCDAEAEALFSR----LETGLGFLDLVAQLAPLIGLFGTVLGMIEAFQGLQAAGTSVDP 160
Query: 169 VVSIPGIIESLISILLGLCVSIPSSIAY---NKFIEDSKKFA 207
V GI +L++ GL V++P + + + +E + FA
Sbjct: 161 TVLAGGIWVALLTTAAGLAVAMPVAAVHGWLSAAVERDRVFA 202
>gi|330976699|gb|EGH76742.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. aptata
str. DSM 50252]
Length = 109
Score = 36.2 bits (82), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 27/45 (60%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
+ LL IFS+++W++++ K+ L RQ R + FW+ + L+
Sbjct: 1 MALLVIFSLVTWALLLGKTFQHWRLTRQNRRYATQFWAARDLKNA 45
>gi|218962006|ref|YP_001741781.1| hypothetical protein; putative membrane protein [Candidatus
Cloacamonas acidaminovorans]
gi|167730663|emb|CAO81575.1| hypothetical protein; putative membrane protein [Candidatus
Cloacamonas acidaminovorans]
Length = 261
Score = 36.2 bits (82), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 27/148 (18%), Positives = 67/148 (45%), Gaps = 11/148 (7%)
Query: 49 FITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIG 108
++ LR R L+ K +++ + IF SA+ +K K ++
Sbjct: 90 YLKLRNYIRN--------DQLDEATKIAESYKGTTMGFIFWSALMVFK-DARKSGQTGAD 140
Query: 109 IQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYY--S 166
+++ + ++ A+ + + ++ L + +++ +G+LG + G++ F +AG +
Sbjct: 141 LRNSVQNSLEEAVLQTVYKLDSGLFWFDTLAQVATYLGLLGTIWGLLEAFAGLAGLTGAA 200
Query: 167 NNVVSIPGIIESLISILLGLCVSIPSSI 194
GI +++ + LGL +IP ++
Sbjct: 201 QQTALTDGIKKAIGTTALGLLAAIPLTL 228
>gi|147673075|ref|YP_001217099.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae O395]
gi|262169575|ref|ZP_06037266.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae RC27]
gi|3811311|gb|AAC69453.1| exbB-related protein [Vibrio cholerae]
gi|146314958|gb|ABQ19497.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae O395]
gi|227013459|gb|ACP09669.1| biopolymer transport protein [Vibrio cholerae O395]
gi|262021809|gb|EEY40519.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae RC27]
Length = 457
Score = 36.2 bits (82), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Query: 115 RMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIP 173
R+++ A+ E + LS L +++ ++G+LG V GM+ FQ I + + + V
Sbjct: 333 RLLE-AVVDEQNHLETGLSMLKLLAALAPMLGLLGTVTGMIETFQVITQFGNGDPKVMAG 391
Query: 174 GIIESLISILLGLCVSIPSSIAYN 197
GI +L++ + GL +IP +A+N
Sbjct: 392 GISMALVTTVEGLIAAIPLLLAHN 415
>gi|153802650|ref|ZP_01957236.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae
MZO-3]
gi|124121823|gb|EAY40566.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae
MZO-3]
Length = 457
Score = 36.2 bits (82), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Query: 115 RMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIP 173
R+++ A+ E + LS L +++ ++G+LG V GM+ FQ I + + + V
Sbjct: 333 RLLE-AVVDEQNHLETGLSMLKLLAALAPMLGLLGTVTGMIETFQVITQFGNGDPKVMAG 391
Query: 174 GIIESLISILLGLCVSIPSSIAYN 197
GI +L++ + GL +IP +A+N
Sbjct: 392 GISMALVTTVEGLIAAIPLLLAHN 415
>gi|110681313|ref|YP_684320.1| MotA/TolQ/ExbB proton channel family protein [Roseobacter
denitrificans OCh 114]
gi|109457429|gb|ABG33634.1| MotA/TolQ/ExbB proton channel family domain protein [Roseobacter
denitrificans OCh 114]
Length = 224
Score = 36.2 bits (82), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 46/83 (55%), Gaps = 3/83 (3%)
Query: 114 DRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVS 171
DR++ A A L + L S++ L+G+ G VLGM+ F+++ AG + +
Sbjct: 99 DRLVKEAAA-NLSRLEGGYRILDSIAQISPLLGLFGTVLGMIDAFRALQEAGAAVDPSLL 157
Query: 172 IPGIIESLISILLGLCVSIPSSI 194
GI +L++ +GL V+IP+S+
Sbjct: 158 AGGIWVALLTTAVGLAVAIPTSL 180
>gi|153829989|ref|ZP_01982656.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae
623-39]
gi|148874525|gb|EDL72660.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae
623-39]
Length = 457
Score = 36.2 bits (82), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Query: 115 RMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIP 173
R+++ A+ E + LS L +++ ++G+LG V GM+ FQ I + + + V
Sbjct: 333 RLLE-AVVDEQNHLETGLSMLKLLAALAPMLGLLGTVTGMIETFQVITQFGNGDPKVMAG 391
Query: 174 GIIESLISILLGLCVSIPSSIAYN 197
GI +L++ + GL +IP +A+N
Sbjct: 392 GISMALVTTVEGLIAAIPLLLAHN 415
>gi|118474543|ref|YP_892022.1| TonB-system energizer ExbB [Campylobacter fetus subsp. fetus 82-40]
gi|118413769|gb|ABK82189.1| TonB-system energizer ExbB [Campylobacter fetus subsp. fetus 82-40]
Length = 137
Score = 36.2 bits (82), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISIL 183
E++T+ L+ L + + +G+LG V G+M F + +G + I G+ +L +
Sbjct: 50 EDLTKNLTILYIIYTNAPYIGLLGTVAGIMITFYDMGMSGGIDTKSIMI-GLSLALKATA 108
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQME 211
LGL V+IP+ I YN FI F + E
Sbjct: 109 LGLIVAIPTLIIYNGFIRKVDVFLNRYE 136
>gi|254225265|ref|ZP_04918877.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae V51]
gi|125622106|gb|EAZ50428.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae V51]
Length = 457
Score = 36.2 bits (82), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Query: 115 RMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIP 173
R+++ A+ E + LS L +++ ++G+LG V GM+ FQ I + + + V
Sbjct: 333 RLLE-AVVDEQNHLETGLSMLKLLAALAPMLGLLGTVTGMIETFQVITQFGNGDPKVMAG 391
Query: 174 GIIESLISILLGLCVSIPSSIAYN 197
GI +L++ + GL +IP +A+N
Sbjct: 392 GISMALVTTVEGLIAAIPLLLAHN 415
>gi|229529414|ref|ZP_04418804.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae
12129(1)]
gi|229333188|gb|EEN98674.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae
12129(1)]
Length = 457
Score = 36.2 bits (82), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Query: 115 RMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIP 173
R+++ A+ E + LS L +++ ++G+LG V GM+ FQ I + + + V
Sbjct: 333 RLLE-AVVDEQNHLETGLSMLKLLAALAPMLGLLGTVTGMIETFQVITQFGNGDPKVMAG 391
Query: 174 GIIESLISILLGLCVSIPSSIAYN 197
GI +L++ + GL +IP +A+N
Sbjct: 392 GISMALVTTVEGLIAAIPLLLAHN 415
>gi|149198900|ref|ZP_01875942.1| MotA/TolQ/ExbB proton channel [Lentisphaera araneosa HTCC2155]
gi|149138098|gb|EDM26509.1| MotA/TolQ/ExbB proton channel [Lentisphaera araneosa HTCC2155]
Length = 209
Score = 36.2 bits (82), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 53/99 (53%), Gaps = 4/99 (4%)
Query: 114 DRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP 173
+R + +I E+ I ++ L ++ + L+G+LG V GM+ F +++ S ++ +
Sbjct: 97 ERYEEASIT-EINSIHKEFGVLNALVKSAPLLGLLGTVAGMIQTFAALSQ--SGDITHVS 153
Query: 174 -GIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
GI ++L++ LGL +++P A + +M++E
Sbjct: 154 QGISKALLTTQLGLLIALPGVFASAYLKRKFLRLSMELE 192
>gi|229514950|ref|ZP_04404410.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae TMA
21]
gi|229347655|gb|EEO12614.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae TMA
21]
Length = 457
Score = 36.2 bits (82), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Query: 115 RMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIP 173
R+++ A+ E + LS L +++ ++G+LG V GM+ FQ I + + + V
Sbjct: 333 RLLE-AVVDEQNHLETGLSMLKLLAALAPMLGLLGTVTGMIETFQVITQFGNGDPKVMAG 391
Query: 174 GIIESLISILLGLCVSIPSSIAYN 197
GI +L++ + GL +IP +A+N
Sbjct: 392 GISMALVTTVEGLIAAIPLLLAHN 415
>gi|260772794|ref|ZP_05881710.1| MotA/TolQ/ExbB proton channel family protein [Vibrio metschnikovii
CIP 69.14]
gi|260611933|gb|EEX37136.1| MotA/TolQ/ExbB proton channel family protein [Vibrio metschnikovii
CIP 69.14]
Length = 456
Score = 36.2 bits (82), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Query: 120 AIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIES 178
A+ E + + LS L ++ ++G+LG V GM+ FQ I + + + V GI +
Sbjct: 335 AVVDEQAGLEKGLSMLKLFAALAPMLGLLGTVTGMIETFQVITQFGNGDPKVMAGGISMA 394
Query: 179 LISILLGLCVSIPSSIAYN 197
L++ +LGL ++P +A+N
Sbjct: 395 LVTTVLGLVAAMPLLLAHN 413
>gi|254286393|ref|ZP_04961351.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae
AM-19226]
gi|150423560|gb|EDN15503.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae
AM-19226]
Length = 457
Score = 36.2 bits (82), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Query: 115 RMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIP 173
R+++ A+ E + LS L +++ ++G+LG V GM+ FQ I + + + V
Sbjct: 333 RLLE-AVVDEQNHLETGLSMLKLLAALAPMLGLLGTVTGMIETFQVITQFGNGDPKVMAG 391
Query: 174 GIIESLISILLGLCVSIPSSIAYN 197
GI +L++ + GL +IP +A+N
Sbjct: 392 GISMALVTTVEGLIAAIPLLLAHN 415
>gi|297579115|ref|ZP_06941043.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae
RC385]
gi|297536709|gb|EFH75542.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae
RC385]
Length = 457
Score = 36.2 bits (82), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Query: 115 RMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIP 173
R+++ A+ E + LS L +++ ++G+LG V GM+ FQ I + + + V
Sbjct: 333 RLLE-AVVDEQNHLETGLSMLKLLAALAPMLGLLGTVTGMIETFQVITQFGNGDPKVMAG 391
Query: 174 GIIESLISILLGLCVSIPSSIAYN 197
GI +L++ + GL +IP +A+N
Sbjct: 392 GISMALVTTVEGLIAAIPLLLAHN 415
>gi|330943956|gb|EGH46161.1| TonB system transport protein ExbB2 [Pseudomonas syringae pv.
pisi str. 1704B]
Length = 53
Score = 36.2 bits (82), Expect = 3.9, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 25/39 (64%)
Query: 27 IITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS 65
+I LL +FS+ +W + + K V F L+ Q R+F + FW+
Sbjct: 15 VIWLLVLFSVATWGLALLKGVQFSRLKSQDRKFHKRFWA 53
>gi|189219778|ref|YP_001940419.1| biopolymer transport protein [Methylacidiphilum infernorum V4]
gi|189186636|gb|ACD83821.1| Biopolymer transport protein [Methylacidiphilum infernorum V4]
Length = 214
Score = 36.2 bits (82), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 65/123 (52%), Gaps = 7/123 (5%)
Query: 108 GIQDR----IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA- 162
G++ R +D M++ A + ++E + L L + + G L+G+LG V GMM F +
Sbjct: 78 GLRHRNSMPVDAMIEAA-SGQIERYSRGLVILDTAVTLGPLLGLLGTVTGMMHAFSIVGT 136
Query: 163 GYYSNNVVSIPG-IIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
G + +I G + ESLI++ GL ++I + I N F ++K ++EG+ IL
Sbjct: 137 GEIAGKQAAITGGVAESLIAVSFGLAIAILAIIPLNFFNARTEKVRRELEGYCTRLEMIL 196
Query: 222 SRQ 224
++
Sbjct: 197 KKK 199
>gi|149193989|ref|ZP_01871087.1| exbb\tolq family transport protein [Caminibacter mediatlanticus
TB-2]
gi|149135942|gb|EDM24420.1| exbb\tolq family transport protein [Caminibacter mediatlanticus
TB-2]
Length = 182
Score = 36.2 bits (82), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 118 DVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIE 177
D I ++ L FL ++S +G+ G V+G++ F + + N+++ P I +
Sbjct: 81 DACIEGARKKANNGLVFLSIVASTAPFIGLFGTVVGILNAFAGMQSVTTINMIA-PAIAD 139
Query: 178 SLISILLGLCVSIPS 192
+LI+ +G+ V++P+
Sbjct: 140 ALIATAIGIIVAVPA 154
>gi|153213369|ref|ZP_01948758.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae 1587]
gi|153824812|ref|ZP_01977479.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae
MZO-2]
gi|124116022|gb|EAY34842.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae 1587]
gi|149741530|gb|EDM55560.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae
MZO-2]
Length = 457
Score = 36.2 bits (82), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Query: 115 RMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIP 173
R+++ A+ E + LS L +++ ++G+LG V GM+ FQ I + + + V
Sbjct: 333 RLLE-AVVDEQNHLETGLSMLKLLAALAPMLGLLGTVTGMIETFQVITQFGNGDPKVMAG 391
Query: 174 GIIESLISILLGLCVSIPSSIAYN 197
GI +L++ + GL +IP +A+N
Sbjct: 392 GISMALVTTVEGLIAAIPLLLAHN 415
>gi|262402226|ref|ZP_06078787.1| MotA/TolQ/ExbB proton channel family protein [Vibrio sp. RC586]
gi|262351008|gb|EEZ00141.1| MotA/TolQ/ExbB proton channel family protein [Vibrio sp. RC586]
Length = 458
Score = 36.2 bits (82), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Query: 115 RMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIP 173
R+++ A+ E + LS L +++ ++G+LG V GM+ FQ I + + + V
Sbjct: 334 RLLE-AVVDEQNHLETGLSMLKLLAALAPMLGLLGTVTGMIETFQVITQFGNGDPKVMAG 392
Query: 174 GIIESLISILLGLCVSIPSSIAYN 197
GI +L++ + GL +IP +A+N
Sbjct: 393 GISMALVTTVEGLIAAIPLLLAHN 416
>gi|229520580|ref|ZP_04410004.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae TM
11079-80]
gi|229342404|gb|EEO07398.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae TM
11079-80]
Length = 457
Score = 36.2 bits (82), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Query: 115 RMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIP 173
R+++ A+ E + LS L +++ ++G+LG V GM+ FQ I + + + V
Sbjct: 333 RLLE-AVVDEQNHLETGLSMLKLLAALAPMLGLLGTVTGMIETFQVITQFGNGDPKVMAG 391
Query: 174 GIIESLISILLGLCVSIPSSIAYN 197
GI +L++ + GL +IP +A+N
Sbjct: 392 GISMALVTTVEGLIAAIPLLLAHN 415
>gi|197337647|ref|YP_002157783.1| TolQ protein [Vibrio fischeri MJ11]
gi|197314899|gb|ACH64348.1| TolQ protein [Vibrio fischeri MJ11]
Length = 451
Score = 36.2 bits (82), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Query: 115 RMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIP 173
R+++ I E + + + LS L +++ ++G+LG V GM+ FQ I + + + V
Sbjct: 331 RLLET-IVDEQQGLEKGLSMLKLLAALAPMLGLLGTVTGMIETFQVITQFGNGDPKVMAG 389
Query: 174 GIIESLISILLGLCVSIPSSIAYN 197
GI +L++ +LGL ++P + +N
Sbjct: 390 GISMALVTTVLGLVAAMPLLLTHN 413
>gi|242310638|ref|ZP_04809793.1| biopolymer transport protein exbb [Helicobacter pullorum MIT
98-5489]
gi|239523036|gb|EEQ62902.1| biopolymer transport protein exbb [Helicobacter pullorum MIT
98-5489]
Length = 140
Score = 36.2 bits (82), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Query: 124 ELE-EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLIS 181
ELE E+++ L+ + ++ S VG+LG V G++ F I + SI G+ +L +
Sbjct: 29 ELEIELSKNLTLIATIGSNAPYVGLLGTVFGIIMTFVQIGQSGMVDTTSIMTGLALALQA 88
Query: 182 ILLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
GL V+IPS I YN + S+ + E
Sbjct: 89 TAGGLLVAIPSIIFYNLLMRKSEVLVAKWE 118
>gi|254477892|ref|ZP_05091277.1| MotA/TolQ/ExbB proton channel family domain protein [Ruegeria sp.
R11]
gi|214028477|gb|EEB69313.1| MotA/TolQ/ExbB proton channel family domain protein [Ruegeria sp.
R11]
Length = 217
Score = 36.2 bits (82), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Query: 134 FLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGLCVSIP 191
L S++ L+G+ G VLGM+ FQ++ AG + + GI +L++ +GL V++P
Sbjct: 112 LLDSVAQLAPLLGLFGTVLGMITAFQALQEAGAQVDPSILAGGIWVALLTTAVGLAVAMP 171
Query: 192 SSI 194
+++
Sbjct: 172 TAV 174
>gi|255021244|ref|ZP_05293294.1| MotA/TolQ/ExbB proton channel [Acidithiobacillus caldus ATCC 51756]
gi|209574036|gb|ACI62956.1| TonB system transport protein ExbB4 [Acidithiobacillus caldus]
gi|254969359|gb|EET26871.1| MotA/TolQ/ExbB proton channel [Acidithiobacillus caldus ATCC 51756]
Length = 228
Score = 36.2 bits (82), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 51/102 (50%), Gaps = 12/102 (11%)
Query: 120 AIARELEE--------ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA--GYYSNNV 169
A+A LEE + +L L ++ + L+G+ G ++GM F +A G+ V
Sbjct: 93 ALASRLEESVITLAPNLDRRLWLLDTIITLAPLLGLFGTIIGMFHAFHVLAAPGHAPTEV 152
Query: 170 VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
G+ ++L++ GL ++I +A+N F ++ +Q++
Sbjct: 153 TG--GVADALVATASGLFIAILGLLAFNGFNNQVRQILLQLD 192
>gi|158521748|ref|YP_001529618.1| MotA/TolQ/ExbB proton channel [Desulfococcus oleovorans Hxd3]
gi|158510574|gb|ABW67541.1| MotA/TolQ/ExbB proton channel [Desulfococcus oleovorans Hxd3]
Length = 201
Score = 35.8 bits (81), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISILLG 185
+ LS + +++ L+G+LG V GM+ F ++ + + N ++ GI E+LI+ G
Sbjct: 106 SLNRHLSVIAVLAAIAPLLGLLGTVTGMVATFDALTLFGTGNARALAGGISEALITTQAG 165
Query: 186 LCVSIPS 192
L V+IP
Sbjct: 166 LLVAIPG 172
>gi|106879758|emb|CAJ90448.1| putative MotA-TolQ-ExbB proton channel protein [Leptospira biflexa
serovar Patoc strain 'Patoc 1 (Paris)']
Length = 296
Score = 35.8 bits (81), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 91/203 (44%), Gaps = 21/203 (10%)
Query: 25 KCIITLLFIFSILSWSVIIQKSVNFITLRRQF-REFEQLFWS------GQSLETVCKSLK 77
K I ++ + SIL+ +V I++ I +R F +E E L S + L+ K L+
Sbjct: 87 KIIFLVMLLASILAIAVFIER---LIVYKRNFNKESESLLDSLTLLIRHRDLKGTEKLLE 143
Query: 78 NHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGS 137
+H F+ + E +K KG + +M+ I +E + E+L L +
Sbjct: 144 SHPMENSYTRFIHFVLEREKENHKG----------LSELMEGKILKEKLSLEERLPILNT 193
Query: 138 MSSAGLLVGILGAVLGMMGFFQSIAGY-YSNNVVSIPGIIESLISILLGLCVSIPSSIAY 196
+ + +G+LG VLG++ F + S V + I +L++ GL V+IP +A
Sbjct: 194 LGNNTPFIGLLGTVLGVIKAFYGLGTLGNSGAEVVMRSISTALLATAAGLAVAIPVVMAN 253
Query: 197 NKFIEDSKKFAMQMEGFANEFSA 219
N F K Q+E + E A
Sbjct: 254 NYFTRKMKLVIGQLEILSKEIHA 276
>gi|256544637|ref|ZP_05472009.1| phosphate ABC superfamily ATP binding cassette transporter,
permease protein PtsA [Anaerococcus vaginalis ATCC
51170]
gi|256399526|gb|EEU13131.1| phosphate ABC superfamily ATP binding cassette transporter,
permease protein PtsA [Anaerococcus vaginalis ATCC
51170]
Length = 266
Score = 35.8 bits (81), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 9/56 (16%)
Query: 164 YYSNNVVSIPGIIESLISILLGLCVSIP---------SSIAYNKFIEDSKKFAMQM 210
Y S NV IP ++ + +SIL+ L V++P S A NKFI S +FA ++
Sbjct: 44 YSSQNVSIIPALVTTFLSILISLLVTLPIGIFTAIYLSQYAKNKFIIKSVRFATEI 99
>gi|260424620|ref|ZP_05732695.2| MotA/TolQ/ExbB proton channel family protein [Dialister invisus DSM
15470]
gi|260402576|gb|EEW96123.1| MotA/TolQ/ExbB proton channel family protein [Dialister invisus DSM
15470]
Length = 208
Score = 35.8 bits (81), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 45/89 (50%)
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIP 191
L++L + + L+G+LG V+GM+G F ++ G+ E+L+ GL V+I
Sbjct: 114 LNYLDVIVTLSPLMGLLGTVIGMIGSFDVLSTADGQPFAITGGVAEALVCTATGLFVAII 173
Query: 192 SSIAYNKFIEDSKKFAMQMEGFANEFSAI 220
+ IAY + + +E ++ + AI
Sbjct: 174 ALIAYTYLSQQVSHYISSIEKLSSVYLAI 202
>gi|301167607|emb|CBW27190.1| putative transport-related protein [Bacteriovorax marinus SJ]
Length = 172
Score = 35.8 bits (81), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 138 MSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISILLGLCVSIPSSIAY 196
++S L+G+LG V+G++ F+ ++ NN S GI +LI+ + G+ V+IP I +
Sbjct: 90 IASISPLLGLLGTVIGVLVAFKVMSQTGLNNPASFAQGISMALITTVGGMIVAIPHYIGH 149
Query: 197 NKFIEDSKKFAMQME 211
N I +F ++E
Sbjct: 150 NYLIGMVDQFETRLE 164
>gi|254483016|ref|ZP_05096251.1| transporter, MotA/TolQ/ExbB proton channel family protein [marine
gamma proteobacterium HTCC2148]
gi|214036701|gb|EEB77373.1| transporter, MotA/TolQ/ExbB proton channel family protein [marine
gamma proteobacterium HTCC2148]
Length = 450
Score = 35.8 bits (81), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 48/86 (55%), Gaps = 6/86 (6%)
Query: 117 MDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GI 175
+D A+ E+ + + ++ L+G+LG V GM+ FQ+I+ + + + + GI
Sbjct: 339 LDEAVLAEIPALERGNGLIKLFAATSPLLGLLGTVTGMILTFQAISLFGTGDPKLMAGGI 398
Query: 176 IESLISILLGLCVSIP-----SSIAY 196
++L++ +LGL V+IP S +AY
Sbjct: 399 SQALMTTVLGLVVAIPLLFGHSVVAY 424
>gi|213621946|ref|ZP_03374729.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Typhi str. E98-2068]
Length = 48
Score = 35.8 bits (81), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 27/37 (72%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKS 46
D++I LF++ L VK I+ +L FSI SW++IIQ++
Sbjct: 3 DMNILDLFLKASLLVKLIMLILIGFSIASWAIIIQRT 39
>gi|254255483|ref|ZP_04948799.1| Cation transport ATPase [Burkholderia dolosa AUO158]
gi|124901220|gb|EAY71970.1| Cation transport ATPase [Burkholderia dolosa AUO158]
Length = 814
Score = 35.8 bits (81), Expect = 4.5, Method: Composition-based stats.
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 7/70 (10%)
Query: 111 DRIDRMMD-VAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
DR+DR++D +AIAR I G + G+ + I ++ GF IAG + V
Sbjct: 594 DRLDRLVDAIAIARRSRRIA------GESVAVGMSLSIAAMLIAAFGFLPPIAGAVAQEV 647
Query: 170 VSIPGIIESL 179
+ + I+ +L
Sbjct: 648 IDVVVIVNAL 657
>gi|300866206|ref|ZP_07110921.1| biopolymer transport protein [Oscillatoria sp. PCC 6506]
gi|300335799|emb|CBN56081.1| biopolymer transport protein [Oscillatoria sp. PCC 6506]
Length = 217
Score = 35.8 bits (81), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 80/172 (46%), Gaps = 35/172 (20%)
Query: 34 FSILSWSVIIQK-SVNFITLRRQFREFEQL--FWSGQSLETVCKSLKNHHNIGLAAIFMS 90
FS++ ++I+++ + ++RQ +Q F+ ++L + LK + ++ L IF++
Sbjct: 20 FSVVGTALIVERVRFWYRVMKRQAPVIKQALRFYQLENLVGTIELLKQNADLPLPRIFLA 79
Query: 91 AMS-------EWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
A+ E++ + + A++ I R + D I S+S
Sbjct: 80 ALELEDPNPEEFRLALESEAQAEIPNLKRFNNFFDTII---------------SLSP--- 121
Query: 144 LVGILGAVLGMMGFFQS-----IAGYYSNNVVSIPGIIESLISILLGLCVSI 190
L G+LG VLG++ F S + G + V S GI E+L+S GL V+I
Sbjct: 122 LFGLLGTVLGLITSFASLKVGDVGGSKTAGVTS--GISEALVSTASGLVVAI 171
>gi|319793940|ref|YP_004155580.1| mota/tolq/exbb proton channel [Variovorax paradoxus EPS]
gi|315596403|gb|ADU37469.1| MotA/TolQ/ExbB proton channel [Variovorax paradoxus EPS]
Length = 210
Score = 35.8 bits (81), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 59/122 (48%), Gaps = 11/122 (9%)
Query: 105 SPIGIQDRIDRMMDVA---IARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI 161
+P +D + M+ + IA +LE L L +++SA L+G+LG V+GM+ F S
Sbjct: 84 NPRCTEDDLRAAMEASGRTIAHKLERY---LPALATIASAAPLLGLLGTVIGMIEIFGSQ 140
Query: 162 A----GYYSNNVVSIP-GIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANE 216
+ S N + GI +L + GL V+IP+ I + F ++ + +E
Sbjct: 141 SPVNGAVGSGNPAQLAHGISIALYNTAFGLIVAIPTLIFWRYFRSRVDEYLLNLELSGER 200
Query: 217 FS 218
F+
Sbjct: 201 FA 202
>gi|326402865|ref|YP_004282946.1| putative proton channel MotA/TolQ/ExbB [Acidiphilium multivorum
AIU301]
gi|325049726|dbj|BAJ80064.1| putative proton channel MotA/TolQ/ExbB [Acidiphilium multivorum
AIU301]
Length = 223
Score = 35.8 bits (81), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 50/101 (49%), Gaps = 1/101 (0%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
D +D ++ I + IT L L + + L+G+ G ++GM+ F ++ V
Sbjct: 89 DELDNHLEEEIMDAMPRITRGLWILDTAVTIAPLLGLFGTIIGMIQAFDVLSSNGGPAKV 148
Query: 171 SIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
+ GI ++L+S GL ++I + N F S++ +Q+E
Sbjct: 149 T-GGIADALVSTGAGLLIAIIAVYLVNYFNNLSRQIVLQLE 188
>gi|296125586|ref|YP_003632838.1| MotA/TolQ/ExbB proton channel [Brachyspira murdochii DSM 12563]
gi|296017402|gb|ADG70639.1| MotA/TolQ/ExbB proton channel [Brachyspira murdochii DSM 12563]
Length = 209
Score = 35.8 bits (81), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 90/198 (45%), Gaps = 15/198 (7%)
Query: 31 LFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMS 90
L I S+L+ ++I+ + + F ++ + L ++ K + I L S
Sbjct: 22 LLISSVLALTIIVDRFIYFTRIKSEDNSL------APKLISLVKEKEIKAAIALCEASKS 75
Query: 91 AMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGA 150
+S S K +P M A +EL + +S L ++S+ L+G+LG
Sbjct: 76 PLSNIIMSGLKNINAP-------KEFMQSASNKELPRLERFISALSTISTIAPLLGLLGT 128
Query: 151 VLGMMGFFQSIAGYYSNNVVSIP-GIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQ 209
+LGM+ F I+ S ++ GI +L++ GL ++IP+ I YN F+ +
Sbjct: 129 ILGMIQSFAVISVVGSGKPTALASGIANALLTTAAGLIIAIPAVIFYNYFVNTINARILF 188
Query: 210 MEGFANEFSA-ILSRQTE 226
ME +NE S I+S+ E
Sbjct: 189 MENLSNEISDYIISQNNE 206
>gi|148653313|ref|YP_001280406.1| MotA/TolQ/ExbB proton channel [Psychrobacter sp. PRwf-1]
gi|148572397|gb|ABQ94456.1| MotA/TolQ/ExbB proton channel [Psychrobacter sp. PRwf-1]
Length = 219
Score = 35.8 bits (81), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 52/105 (49%), Gaps = 4/105 (3%)
Query: 105 SPIGIQDR---IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI 161
S +G +R +++++ I R + L+ LG+ ++ +G+ G V G+ SI
Sbjct: 62 SALGSSERKTVVEQVLMKEIGRYRYSGEKGLAILGTTAAIAPFIGLFGTVWGIFHALHSI 121
Query: 162 AGYYSNNVVSIPGII-ESLISILLGLCVSIPSSIAYNKFIEDSKK 205
+ + G + E+LI LGL V+IP+ I YN I +++
Sbjct: 122 GESGQAGLSQVAGPVGEALIMTGLGLAVAIPAVIFYNIAIRINRR 166
>gi|116624959|ref|YP_827115.1| chemotaxis protein [Candidatus Solibacter usitatus Ellin6076]
gi|116228121|gb|ABJ86830.1| chemotaxis protein [Candidatus Solibacter usitatus Ellin6076]
Length = 291
Score = 35.8 bits (81), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 68/164 (41%), Gaps = 20/164 (12%)
Query: 66 GQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
GQ L K L HH + + + + G P+ ID MM+ +
Sbjct: 107 GQVLNKYPKFLAQHHALHF-------LCDTLRMAVTGGVDPL----EIDSMMEADLDVHH 155
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGM---MGFFQSIAGYYSNNVVSIPGIIESLISI 182
+E E ++ L +M+ A +GI+ AVLG+ MG V + ++ + + I
Sbjct: 156 KESAEPIAALSTMADALPGLGIVAAVLGVVLTMGALGGPKEAIGEKVAA--ALVGTFLGI 213
Query: 183 LLGLCVSIPSSIAYNKFIEDSKKFAMQME----GFANEFSAILS 222
LL + P ++A K E +F + + GF E S +L+
Sbjct: 214 LLCYGIFGPLAVAMGKNAEADSQFYLVLRMAALGFVKELSPMLA 257
>gi|110633791|ref|YP_673999.1| MotA/TolQ/ExbB proton channel [Mesorhizobium sp. BNC1]
gi|110284775|gb|ABG62834.1| outer membrane transport energization protein ExbB [Chelativorans
sp. BNC1]
Length = 232
Score = 35.8 bits (81), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 95/228 (41%), Gaps = 54/228 (23%)
Query: 27 IITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAA 86
++ L+ + SI + ++I+ K F Q FW E V + L A
Sbjct: 19 VVALILVLSIFAVAIILLK-------------FAQ-FWR----ERVGRHRGAER--ALHA 58
Query: 87 IFMSAMSEWKKSCDKGARSPIG-------------------IQDRIDRMMDVAIARELEE 127
F + E ++ + G RSP G I+D + R +A++R L +
Sbjct: 59 WFHAGHGEARRMVE-GDRSPAGEALAASMRLAAMRNVPKDAIEDEVAR---IALSR-LHD 113
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLG 185
+ L +++ L+G+ G VLGM+ F+ + AG + + GI +L++ G
Sbjct: 114 LQRGFRALDAIAQISPLLGLFGTVLGMIEAFRQLQNAGNAVDPSMLAGGIWVALLTTAAG 173
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS-----RQTEGN 228
L V++P S+ F + + +E SA+LS RQ EG
Sbjct: 174 LAVAMPVSLLLTWFETRVENERVAIETMT---SAVLSHRGAHRQPEGE 218
>gi|170727418|ref|YP_001761444.1| MotA/TolQ/ExbB proton channel [Shewanella woodyi ATCC 51908]
gi|169812765|gb|ACA87349.1| MotA/TolQ/ExbB proton channel [Shewanella woodyi ATCC 51908]
Length = 451
Score = 35.8 bits (81), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 117 MDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII 176
+D AI +E + ++S + +++ ++G+LG V GM+ FQ+I + + + + G I
Sbjct: 340 LDEAILKETPALETRISIIKVLAAIAPMMGLLGTVTGMIATFQTIQLFGTGDPRLMAGGI 399
Query: 177 E-SLISILLGLCVSIP 191
+L++ + GL ++P
Sbjct: 400 SMALMTTVQGLVAALP 415
>gi|321443981|gb|EFX60255.1| hypothetical protein DAPPUDRAFT_344393 [Daphnia pulex]
Length = 194
Score = 35.8 bits (81), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 24/140 (17%), Positives = 67/140 (47%), Gaps = 3/140 (2%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
MD+S++ ++ + VK ++ L + SI++W+++ K +R+ R + + ++
Sbjct: 56 MDLSVWGMYQHADIVVKIVMIGLVLASIVTWTILFSKGSELFRAKRRLRREQLALANVRT 115
Query: 69 LETVCKSLKNHHNIGLAAIFMS-AMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
L+ + ++ ++ + ++ A +E + S + + GI++R ++ +A
Sbjct: 116 LDEASELAQHFSEESISVVLLNDAQNELELSAESNDNN--GIKERTGFRLERRVAGYSRN 173
Query: 128 ITEKLSFLGSMSSAGLLVGI 147
+ FL ++ + VG+
Sbjct: 174 MGRGNGFLATIGAISPFVGL 193
>gi|183396676|dbj|BAG28275.1| MotA/TolQ/Exb proton channel [Desulfotignum balticum]
Length = 180
Score = 35.8 bits (81), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 138 MSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIE-SLISILLGLCVSIP 191
+S+ L+G+LG V+GMM F+ I + + N ++ G I +LI+ GL V+IP
Sbjct: 96 LSAVAPLLGLLGTVVGMMHTFEVITVFGTGNARAMAGGISVALITTQTGLMVAIP 150
>gi|89901922|ref|YP_524393.1| MotA/TolQ/ExbB proton channel [Rhodoferax ferrireducens T118]
gi|89346659|gb|ABD70862.1| MotA/TolQ/ExbB proton channel [Rhodoferax ferrireducens T118]
Length = 221
Score = 35.8 bits (81), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 7/95 (7%)
Query: 121 IARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFF--QSIAGYYS--NNVVSIPGII 176
+A LE+ L+ L +++SA L+G+ G V+GM+ F QS G + N GI
Sbjct: 114 VAHRLEKY---LNALATIASAAPLMGLFGTVVGMIEIFGSQSTPGGATGGNPAQLAHGIS 170
Query: 177 ESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
+L + GL V+IPS I + F ++ + +E
Sbjct: 171 IALYNTAFGLIVAIPSLIFWRYFRARVDEYLLTLE 205
>gi|209808938|ref|YP_002264476.1| biopolymer transport protein TolR [Aliivibrio salmonicida LFI1238]
gi|208010500|emb|CAQ80866.1| biopolymer transport protein TolR [Aliivibrio salmonicida LFI1238]
Length = 451
Score = 35.8 bits (81), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Query: 115 RMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIP 173
R+++ I E + + + LS L +++ ++G+LG V GM+ FQ I + + + V
Sbjct: 331 RLLET-IVDEQQGLEKGLSMLKLLAALAPMLGLLGTVTGMIETFQVITQFGNGDPKVMAG 389
Query: 174 GIIESLISILLGLCVSIPSSIAYN 197
GI +L++ +LGL ++P + +N
Sbjct: 390 GISMALVTTVLGLVAAMPLLLTHN 413
>gi|294101348|ref|YP_003553206.1| MotA/TolQ/ExbB proton channel [Aminobacterium colombiense DSM
12261]
gi|293616328|gb|ADE56482.1| MotA/TolQ/ExbB proton channel [Aminobacterium colombiense DSM
12261]
Length = 209
Score = 35.8 bits (81), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 97/192 (50%), Gaps = 31/192 (16%)
Query: 27 IITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS---------GQSLETVCKSLK 77
I+ ++F+ SI++ V I++ + F RR + E+L + + + KS
Sbjct: 10 IMWVIFVLSIIALGVFIERVLFF---RRSSTDPEKLELALSEALYENDAEKATQIAKS-- 64
Query: 78 NHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGS 137
+ L +F++A++ W+ + +++ I REL + L+ LG+
Sbjct: 65 --GDSSLHRLFIAAVAHWQVDTEA-----------FKLLLEQQIRRELFRWIKGLTLLGT 111
Query: 138 MSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISILLGLCVSIPSSIAY 196
+S L+G+LG VLGM+ F+ + + ++++ GI ++L++ + GL +++P+ +AY
Sbjct: 112 ISRVAPLLGLLGTVLGMVEIFRGLPQASQSPMIALSGGIWQALLTTVAGLSIAVPTVLAY 171
Query: 197 ---NKFIEDSKK 205
N I+D ++
Sbjct: 172 TYLNAKIDDQEE 183
>gi|260778808|ref|ZP_05887700.1| MotA/TolQ/ExbB proton channel family protein [Vibrio
coralliilyticus ATCC BAA-450]
gi|260604972|gb|EEX31267.1| MotA/TolQ/ExbB proton channel family protein [Vibrio
coralliilyticus ATCC BAA-450]
Length = 452
Score = 35.8 bits (81), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSI 190
LS L +++ ++G+LG V GM+ FQ I + + + V GI +L++ +LGL ++
Sbjct: 346 LSMLKLLAALAPMLGLLGTVTGMIETFQVITQFGNGDPKVMAGGISMALVTTVLGLVAAM 405
Query: 191 PSSIAYN 197
P +A+N
Sbjct: 406 PLLLAHN 412
>gi|304312931|ref|YP_003812529.1| MotA/TolQ/ExbB proton channel family protein [gamma proteobacterium
HdN1]
gi|301798664|emb|CBL46896.1| MotA/TolQ/ExbB proton channel family protein [gamma proteobacterium
HdN1]
Length = 206
Score = 35.8 bits (81), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 60/111 (54%), Gaps = 3/111 (2%)
Query: 120 AIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQS--IAGYYSNNVVSIPGIIE 177
A + EL + L+ LGS++S L+G+LG VLGM+ F S + G +S +++ GI +
Sbjct: 95 AASHELHRMQRFLNLLGSIASIAPLLGLLGTVLGMVDMFNSLILTGNHSTTLLA-AGIAK 153
Query: 178 SLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
+L + + GL V+IPS Y F ++ + ME A + +L E +
Sbjct: 154 ALYTTVAGLVVAIPSVFFYRFFNRRIEELLVTMEQEAIKLVDVLHGDREND 204
>gi|154149487|ref|YP_001406270.1| ExbB\TolQ family transport protein [Campylobacter hominis ATCC
BAA-381]
gi|153805496|gb|ABS52503.1| ExbB\TolQ family transport protein [Campylobacter hominis ATCC
BAA-381]
Length = 192
Score = 35.4 bits (80), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 46/87 (52%), Gaps = 3/87 (3%)
Query: 112 RIDRMMDVAIARELEE--ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
R+ R +AI + + E T L++L +SS +G+ G V+ ++ F + S+
Sbjct: 77 RVTRE-KLAICQGMAEKNATSGLTWLSIISSTSPFIGLFGTVISILDTFSKMGAGNSSIA 135
Query: 170 VSIPGIIESLISILLGLCVSIPSSIAY 196
V P I E+L++ G+ V+IP+ A+
Sbjct: 136 VIAPAISEALVATGCGIFVAIPAYTAH 162
>gi|88802049|ref|ZP_01117577.1| MotA/TolQ/ExbB proton channel family protein [Polaribacter irgensii
23-P]
gi|88782707|gb|EAR13884.1| MotA/TolQ/ExbB proton channel family protein [Polaribacter irgensii
23-P]
Length = 240
Score = 35.4 bits (80), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 94/214 (43%), Gaps = 41/214 (19%)
Query: 5 GLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFW 64
G M I + AL + + +A++ II L ++ ++ + ++
Sbjct: 46 GPVFMGIVLVALILGLAIAIERIIYL---------------NLATTNTKKLVADVDEALS 90
Query: 65 SG--QSLETVCKSLKNHHNIGLAAIFMSAMS---EWKKSCDKGARSPIGIQDRIDRMMDV 119
SG ++ + VC++ K +A+IF + E +S +K S G+Q
Sbjct: 91 SGGVEAAKEVCRNTKGP----VASIFYQGLDRADEGVESAEKAVVSYGGVQ--------- 137
Query: 120 AIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIE 177
+ + + +S+L + ++G +G V+GM+G F +I A S +VV++ GI
Sbjct: 138 -----MGLLEKNVSWLSLFIALAPMLGFMGTVIGMIGAFDAIAQANDISPSVVAV-GIKV 191
Query: 178 SLISILLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
+L++ + GL V+I + YN + ME
Sbjct: 192 ALLTTVFGLVVAIILQVFYNYIVSKIDSIVNNME 225
>gi|313206440|ref|YP_004045617.1| outer membrane transport energization protein exbb [Riemerella
anatipestifer DSM 15868]
gi|312445756|gb|ADQ82111.1| outer membrane transport energization protein ExbB [Riemerella
anatipestifer DSM 15868]
gi|315023619|gb|EFT36623.1| MotA/TolQ/ExbB proton channel [Riemerella anatipestifer RA-YM]
gi|325336116|gb|ADZ12390.1| ExbD1 [Riemerella anatipestifer RA-GD]
Length = 288
Score = 35.4 bits (80), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 52/99 (52%), Gaps = 12/99 (12%)
Query: 111 DRIDRMMDVAIARELEEIT--------EKLSFLGSMSSAGLLVGILGAVLGMM-GFFQSI 161
D+ +M VA+ + LEE T + + L ++ + LV +LG V+GM+ FF
Sbjct: 166 DKEKKM--VALTKALEEATTLEMPMLEKNMMILSTLGTVATLVALLGTVIGMIKAFFALG 223
Query: 162 AGYYSNNVVSIP-GIIESLISILLGLCVSIPSSIAYNKF 199
+G + + ++ GI E+LI+ LG+ S + I YN F
Sbjct: 224 SGGGTPDAAALSIGISEALINTALGIGTSAIAIILYNFF 262
>gi|296135462|ref|YP_003642704.1| MotA/TolQ/ExbB proton channel [Thiomonas intermedia K12]
gi|295795584|gb|ADG30374.1| MotA/TolQ/ExbB proton channel [Thiomonas intermedia K12]
Length = 238
Score = 35.4 bits (80), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 34/166 (20%), Positives = 70/166 (42%), Gaps = 25/166 (15%)
Query: 63 FWSGQSLETVCK----SLKNHHNIGLAAIFMSAMSEWKKSCDKGARSP------IGIQ-- 110
FW+ + K LK+H ++ + + K + A SP + +Q
Sbjct: 35 FWAISRMLASAKGWILELKSHAHVDV--------KQLKAKVEDDADSPAAQVVAVALQHD 86
Query: 111 --DRIDRMMDV---AIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYY 165
D +D D A+ + I L L ++ + L+G+LG ++GM F +++
Sbjct: 87 LADPLDHFTDRLEEAVMDQAPRIDRGLWMLDTIVTLAPLLGLLGTIIGMFNTFSALSNPG 146
Query: 166 SNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
+ G+ E+L++ GL +++ +A+N + + Q+E
Sbjct: 147 AATQAVTGGVGEALLATAAGLFIAVLGLVAFNALNQRVRLVMHQLE 192
>gi|239815624|ref|YP_002944534.1| MotA/TolQ/ExbB proton channel [Variovorax paradoxus S110]
gi|239802201|gb|ACS19268.1| MotA/TolQ/ExbB proton channel [Variovorax paradoxus S110]
Length = 210
Score = 35.4 bits (80), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 56/119 (47%), Gaps = 5/119 (4%)
Query: 105 SPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA-- 162
+P +D + M+ + ++ L L +++SA L+G+LG V+GM+ F S +
Sbjct: 84 NPRCTEDDLRAAMEASGRTVAHKLERYLPALATIASAAPLLGLLGTVIGMIEIFGSQSPG 143
Query: 163 --GYYSNNVVSIP-GIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFS 218
S N + GI +L + GL V+IP+ I + F ++ + +E F+
Sbjct: 144 SGAVGSGNPAQLAHGISIALYNTAFGLIVAIPTLIFWRYFRSRVDEYLLNLELSGERFA 202
>gi|300774973|ref|ZP_07084836.1| serine protease [Chryseobacterium gleum ATCC 35910]
gi|300506788|gb|EFK37923.1| serine protease [Chryseobacterium gleum ATCC 35910]
Length = 509
Score = 35.4 bits (80), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 39/92 (42%), Gaps = 19/92 (20%)
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLIS 181
A +E + + + +S G LV G ++G+ QS GYY
Sbjct: 232 ANPIESFIQTDAAINPGNSGGALVNTNGELIGINSAIQSTTGYYQ--------------- 276
Query: 182 ILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGF 213
G ++PS++A K +ED KKF + GF
Sbjct: 277 ---GYGFAVPSNLA-RKIVEDIKKFGIVQRGF 304
>gi|121594645|ref|YP_986541.1| MotA/TolQ/ExbB proton channel [Acidovorax sp. JS42]
gi|222110753|ref|YP_002553017.1| mota/tolq/exbb proton channel [Acidovorax ebreus TPSY]
gi|120606725|gb|ABM42465.1| MotA/TolQ/ExbB proton channel [Acidovorax sp. JS42]
gi|221730197|gb|ACM33017.1| MotA/TolQ/ExbB proton channel [Acidovorax ebreus TPSY]
Length = 212
Score = 35.4 bits (80), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 54/111 (48%), Gaps = 10/111 (9%)
Query: 120 AIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQS-------IAGYYSNNVVSI 172
A+A LE+ L+ L +++SA L+G+LG V+GM+ F S A N
Sbjct: 102 AVAHRLEKY---LNALATIASAAPLLGLLGTVIGMIEIFGSQAGTGAVGATGGGNPAQLA 158
Query: 173 PGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
GI +L + GL V+IP+ I + F + + +E + +F ++R
Sbjct: 159 HGISIALYNTAFGLIVAIPALIFWRYFRSRVDAYLLTLELASEQFVRHINR 209
>gi|254525423|ref|ZP_05137475.1| MotA/TolQ/ExbB proton channel [Prochlorococcus marinus str. MIT
9202]
gi|221536847|gb|EEE39300.1| MotA/TolQ/ExbB proton channel [Prochlorococcus marinus str. MIT
9202]
Length = 203
Score = 35.4 bits (80), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 83/196 (42%), Gaps = 11/196 (5%)
Query: 31 LFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMS 90
L FSI+S++ II++ FI +R + +L ++ + N N+ +
Sbjct: 15 LLFFSIISFACIIER---FIFWKRVVS------LNRNNLNSIAEKFSNLENLPQSKNKND 65
Query: 91 AMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGA 150
+ +KK K + Q + + +++ E + +F + + L+G+LG
Sbjct: 66 LYNPYKKLLLKVKEFNLNNQKNLSIALAISLQSIQYEFDKFNNFFSTTIAISPLLGLLGT 125
Query: 151 VLGMMGFFQSIA-GYYSNNVVSIP-GIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAM 208
V G++ F I G N + GI E+LIS GL ++I + I N F K
Sbjct: 126 VFGLINSFSFIDIGNIGVNAEEVTGGISEALISTAAGLIIAIFTLIFSNYFKAIRNKQLR 185
Query: 209 QMEGFANEFSAILSRQ 224
M F +F I S +
Sbjct: 186 IMNEFCGKFETIYSTK 201
>gi|225163963|ref|ZP_03726252.1| MotA/TolQ/ExbB proton channel [Opitutaceae bacterium TAV2]
gi|224801413|gb|EEG19720.1| MotA/TolQ/ExbB proton channel [Opitutaceae bacterium TAV2]
Length = 227
Score = 35.4 bits (80), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 52/104 (50%), Gaps = 11/104 (10%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAG----YY 165
+ +D A +REL + L+ L + +A L+G+LG V GMM F ++ G
Sbjct: 97 ESSLDDAFAQASSRELSRYQQGLAILDTCITAAPLLGLLGTVTGMMNTFGALGGGDIAAS 156
Query: 166 SNNVVSIPGIIESLISILLGLCVSI----PSSIAYNKFIEDSKK 205
+ + G+ E+LI+ GL ++I P ++ N IE +++
Sbjct: 157 AGQITG--GVGEALIATASGLVIAIVVLFPFNV-LNTRIEQARR 197
>gi|217033100|ref|ZP_03438564.1| hypothetical protein HPB128_27g7 [Helicobacter pylori B128]
gi|298735589|ref|YP_003728112.1| biopolymer transport protein ExbB [Helicobacter pylori B8]
gi|216945173|gb|EEC23864.1| hypothetical protein HPB128_27g7 [Helicobacter pylori B128]
gi|298354776|emb|CBI65648.1| biopolymer transport protein ExbB [Helicobacter pylori B8]
Length = 150
Score = 35.4 bits (80), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 55/110 (50%), Gaps = 11/110 (10%)
Query: 112 RIDRMMDVAIARELE-EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
R+D D R+LE + ++L+ + ++ S +G+LG V+G+M F + S + +
Sbjct: 35 RVDDYTD---RRKLELALHKRLTLVVTIGSNAPYIGLLGTVMGIMLTFMDLG---SASGI 88
Query: 171 SIPGIIESLISIL----LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANE 216
I+ +L L +GL V+IP+ + YN + S+ + + F +
Sbjct: 89 DTKAIMTNLALALKATGMGLLVAIPAIVIYNLLVRKSEILVTKWDIFHHP 138
>gi|283779768|ref|YP_003370523.1| MotA/TolQ/ExbB proton channel [Pirellula staleyi DSM 6068]
gi|283438221|gb|ADB16663.1| MotA/TolQ/ExbB proton channel [Pirellula staleyi DSM 6068]
Length = 278
Score = 35.4 bits (80), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 43/73 (58%), Gaps = 5/73 (6%)
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA--GYYSNNVVSIPGIIESLISILLGL 186
T+ LS +G+++ ++G+ G V GMM F +IA G + I ++L++ LGL
Sbjct: 181 TDVLSVIGAIAP---MLGLFGTVEGMMESFNTIAESGGMARPDQLADSIGKALVTTWLGL 237
Query: 187 CVSIPSSIAYNKF 199
V+IP+ +A++ F
Sbjct: 238 LVAIPAMVAFSIF 250
>gi|213422645|ref|ZP_03355707.1| biopolymer transport protein ExbB [Salmonella enterica subsp.
enterica serovar Typhi str. E01-6750]
Length = 51
Score = 35.4 bits (80), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 13/42 (30%), Positives = 27/42 (64%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFIT 51
D+S++ ++ + VKC++ L + S+++W++ KSV F T
Sbjct: 9 DLSVWGMYQHADIVVKCVMIGLILASVVTWAIFFSKSVEFFT 50
>gi|237746156|ref|ZP_04576636.1| membrane protein [Oxalobacter formigenes HOxBLS]
gi|229377507|gb|EEO27598.1| membrane protein [Oxalobacter formigenes HOxBLS]
Length = 193
Score = 35.4 bits (80), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 78/184 (42%), Gaps = 17/184 (9%)
Query: 18 MQMGLAVKCI---ITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCK 74
+ +GLA+ C +T + W VI + + F + L G SL +
Sbjct: 9 LAIGLAMDCFAVSVTGGLLMKQPKWPVIFKTAFLFGLFQALMPALGWL--GGHSLSHPIR 66
Query: 75 SLKNHHNIGLAA-----IFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
S+ + GL A +F S K+ + + P +R+ + VA + + +
Sbjct: 67 SVDHWVAFGLLAFLGIRMFRSGF----KTPESASAGPDFSSNRVVFALAVATSLDALAVG 122
Query: 130 EKLSFLGSMSSAGLL--VGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
L+FLG S AG+L VG++G + ++ F G + N + P ++ LI +GL
Sbjct: 123 VSLAFLGESSPAGILAPVGLIGGMAALLSFAGFTGGLFFNGLKKFNPELLGGLILFAIGL 182
Query: 187 CVSI 190
+ I
Sbjct: 183 KIFI 186
>gi|225164681|ref|ZP_03726920.1| MotA/TolQ/ExbB proton channel [Opitutaceae bacterium TAV2]
gi|224800720|gb|EEG19077.1| MotA/TolQ/ExbB proton channel [Opitutaceae bacterium TAV2]
Length = 202
Score = 35.4 bits (80), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 48/95 (50%), Gaps = 3/95 (3%)
Query: 120 AIAR-ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGY--YSNNVVSIPGII 176
A AR E+ + L +L + + L+G+ G V ++ F SI+G + V G+
Sbjct: 84 AFARLEVTRMERGLPYLDVIYTGAPLLGLTGTVWSLIRVFSSISGETGLPDPVKFTSGVS 143
Query: 177 ESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
+L + +LGL ++IP+ + + KFA Q++
Sbjct: 144 LALSATVLGLIIAIPALVGSGIYQRKVDKFAAQLD 178
>gi|325107330|ref|YP_004268398.1| MotA/TolQ/ExbB proton channel [Planctomyces brasiliensis DSM 5305]
gi|324967598|gb|ADY58376.1| MotA/TolQ/ExbB proton channel [Planctomyces brasiliensis DSM 5305]
Length = 276
Score = 35.4 bits (80), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 49/99 (49%), Gaps = 8/99 (8%)
Query: 123 RELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-----GIIE 177
R++ E+ + L L +++ L+G+LG V GM+ F IA S+ + P GI
Sbjct: 159 RQVSELRKHLRVLNGVATVSPLIGLLGTVWGMIEAFNGIA---SSAAMGSPEKLAAGIAL 215
Query: 178 SLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANE 216
+L++ GL ++IPS I Y + M M+ A E
Sbjct: 216 ALLTTAAGLMIAIPSLIIYMYLSGRVDRLVMDMDRLAQE 254
>gi|330976698|gb|EGH76741.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. aptata str.
DSM 50252]
Length = 99
Score = 35.4 bits (80), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 147 ILGAVLGMMGFFQSIAGYYSNNVVSIPGII-ESLISILLGLCVSIPSSIAYNKFIEDSKK 205
+ G V G++ +I+ S ++ + G I E+L++ +G+ V++P+ +AYN F K
Sbjct: 1 MFGTVFGIIHALSAISQAKSASIAVVAGPIGEALVATGVGIAVAVPAVLAYNFFGRRLKL 60
Query: 206 FAMQMEGFANEF 217
+E FA +F
Sbjct: 61 VIADLEEFAVDF 72
>gi|161085355|ref|NP_001097653.1| CG33286 [Drosophila melanogaster]
gi|77403943|gb|ABA81850.1| AT08232p [Drosophila melanogaster]
gi|158028594|gb|AAS65080.2| CG33286 [Drosophila melanogaster]
Length = 1062
Score = 35.4 bits (80), Expect = 7.0, Method: Composition-based stats.
Identities = 33/120 (27%), Positives = 57/120 (47%), Gaps = 16/120 (13%)
Query: 16 LFMQMGLAVKCIITLLFIFSILSWSVIIQKSV--NFITLRRQFREFEQLFWSGQSLETVC 73
+F Q+ L V +L FS S V I KSV + +T+R +F+ + + +S E
Sbjct: 238 IFDQLELPV-----MLAEFSATSVEVQIPKSVLKDCVTIRSLHMDFDNISQNAKSFEIAV 292
Query: 74 KSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLS 133
K+ N+ N G+ I S ++EW + IQ+ +M + RE E++ E ++
Sbjct: 293 KASLNYPNAGIVDIENSVVNEWHMQLE--------IQEETLNLM-LTRRREYEDMMELIA 343
>gi|89093289|ref|ZP_01166239.1| MotA/TolQ/ExbB proton channel family protein [Oceanospirillum sp.
MED92]
gi|89082585|gb|EAR61807.1| MotA/TolQ/ExbB proton channel family protein [Oceanospirillum sp.
MED92]
Length = 192
Score = 35.4 bits (80), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 121 IARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIES 178
I +EL+ + + ++ L+G+LG + GM+ FQ I AG + + GI E+
Sbjct: 80 IHKELKPFESGMKTVSILAQTAPLLGLLGTITGMIKAFQVIENAGGAVDAMALAGGIWEA 139
Query: 179 LISILLGLCVSIP 191
+++ +GL V+IP
Sbjct: 140 MLTTGIGLSVAIP 152
>gi|225619481|ref|YP_002720738.1| biopolymer transport protein ExbB [Brachyspira hyodysenteriae WA1]
gi|225214300|gb|ACN83034.1| biopolymer transport protein ExbB [Brachyspira hyodysenteriae WA1]
Length = 210
Score = 35.0 bits (79), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 92/195 (47%), Gaps = 26/195 (13%)
Query: 31 LFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS---GQSLET---VCKSLKNHHNIGL 84
L I S+L ++I+ + + F ++ Q S + L+ +C++ K+ L
Sbjct: 22 LLISSVLGLTIIVDRFIYFTRIKSQDNSLAPKLISLIKDKELKAAIALCETSKSP----L 77
Query: 85 AAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLL 144
A I MS + K+ D S M A +EL + +S L ++S+ L
Sbjct: 78 ANIIMSGL----KNIDMPKES-----------MQSASNKELPRLERFISALSTISTVAPL 122
Query: 145 VGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISILLGLCVSIPSSIAYNKFIEDS 203
+G+LG +LGM+ F I+ S N ++ GI +L++ GL ++IP+ + YN F+
Sbjct: 123 LGLLGTILGMIQSFAVISVAGSGNPSALASGIANALLTTAAGLIIAIPTVVFYNYFVNTL 182
Query: 204 KKFAMQMEGFANEFS 218
+ + +E +NE S
Sbjct: 183 NERILFIENLSNEVS 197
>gi|289207776|ref|YP_003459842.1| MotA/TolQ/ExbB proton channel [Thioalkalivibrio sp. K90mix]
gi|288943407|gb|ADC71106.1| MotA/TolQ/ExbB proton channel [Thioalkalivibrio sp. K90mix]
Length = 214
Score = 35.0 bits (79), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 58/104 (55%), Gaps = 8/104 (7%)
Query: 121 IARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA--GYYSNNVVSIPGIIES 178
+A ELE ++ LG+++ L+G+LG V+GM+ F I G S ++ GI ++
Sbjct: 99 VAHELER---YMNTLGTIAMITPLLGLLGTVVGMIEVFTVITEIGVGSPRDLA-GGISQA 154
Query: 179 LISILLGLCVSIPSSIAYNKFIEDS-KKFAMQMEGFANEFSAIL 221
LI+ G+ V+IP ++A++++ + ++ME A + ++
Sbjct: 155 LITTAAGIGVAIP-ALAFHRYFRGRIDELVLEMEQEATKLVEVI 197
>gi|269798399|ref|YP_003312299.1| MotA/TolQ/ExbB proton channel [Veillonella parvula DSM 2008]
gi|282850636|ref|ZP_06260015.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Veillonella parvula ATCC 17745]
gi|294792267|ref|ZP_06757415.1| biopolymer transport ExbB like protein [Veillonella sp. 6_1_27]
gi|294794129|ref|ZP_06759266.1| biopolymer transport ExbB like protein [Veillonella sp. 3_1_44]
gi|269095028|gb|ACZ25019.1| MotA/TolQ/ExbB proton channel [Veillonella parvula DSM 2008]
gi|282580129|gb|EFB85533.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Veillonella parvula ATCC 17745]
gi|294455699|gb|EFG24071.1| biopolymer transport ExbB like protein [Veillonella sp. 3_1_44]
gi|294457497|gb|EFG25859.1| biopolymer transport ExbB like protein [Veillonella sp. 6_1_27]
Length = 205
Score = 35.0 bits (79), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIP 191
+ +L + + L+G+LG V GM+G F + + ++ G+ E+LI+ GLCV+I
Sbjct: 112 MDYLSATVTISPLLGLLGTVTGMIGSFSILDSGAGASAIT-GGVGEALIATASGLCVAIM 170
Query: 192 SSIAYNKF 199
+ I Y F
Sbjct: 171 AFIVYTIF 178
>gi|297170596|gb|ADI21622.1| biopolymer transport proteins [uncultured myxobacterium
HF0130_06F04]
Length = 216
Score = 35.0 bits (79), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 63/123 (51%), Gaps = 16/123 (13%)
Query: 118 DVAIARELEE--------ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
++ IA +EE IT++ L ++S+ ++G+LG ++G++ F ++A +
Sbjct: 90 EIEIANAIEEASLEVIPNITKRTPTLQAVSNLATMLGLLGTIMGLIEAFDAVAKAPPDQK 149
Query: 170 VSIPGIIESLISILL-----GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+ ++ + I+I + GL V+IP+ AY SKK +++ ++ + +L +
Sbjct: 150 TT---MLTAAIAIAMNTTGFGLMVAIPTIAAYVFLNNTSKKIIDEIDQYSVKLQNLLVSR 206
Query: 225 TEG 227
+G
Sbjct: 207 GKG 209
>gi|78355500|ref|YP_386949.1| biopolymer transport proteins-like [Desulfovibrio desulfuricans
subsp. desulfuricans str. G20]
gi|78217905|gb|ABB37254.1| outer membrane transport energization protein ExbB [Desulfovibrio
desulfuricans subsp. desulfuricans str. G20]
Length = 465
Score = 35.0 bits (79), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 63/129 (48%), Gaps = 12/129 (9%)
Query: 67 QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQD---RIDRMMDVAIAR 123
Q++E V L N+ A A ++ C +P G D +++R ++ A+
Sbjct: 309 QAVEQV---LHGDRNMTAQAGRTPAERVVRRMC-----TPGGTPDDAEQMERRLEQAVLE 360
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISI 182
EL + L + +++ L+G+LG V G++ F+ I + + + + GI E+L++
Sbjct: 361 ELPPLERFLQTIRVLAAISPLLGLLGTVSGIIQTFRIITAHGNGDPKLLSAGISEALLTT 420
Query: 183 LLGLCVSIP 191
GL V+IP
Sbjct: 421 EAGLLVAIP 429
>gi|319763307|ref|YP_004127244.1| mota/tolq/exbb proton channel [Alicycliphilus denitrificans BC]
gi|330825502|ref|YP_004388805.1| MotA/TolQ/ExbB proton channel [Alicycliphilus denitrificans K601]
gi|317117868|gb|ADV00357.1| MotA/TolQ/ExbB proton channel [Alicycliphilus denitrificans BC]
gi|329310874|gb|AEB85289.1| MotA/TolQ/ExbB proton channel [Alicycliphilus denitrificans K601]
Length = 212
Score = 35.0 bits (79), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 53/109 (48%), Gaps = 8/109 (7%)
Query: 123 RELEEITEK-LSFLGSMSSAGLLVGILGAVLGMMGFFQS-------IAGYYSNNVVSIPG 174
R++ EK L+ L +++SA L+G+LG V+GM+ F S A N G
Sbjct: 101 RKVAHRLEKYLTALATIASAAPLLGLLGTVIGMIEIFGSQAGTGAVGATGGGNPAQLAHG 160
Query: 175 IIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
I +L + GL ++IP+ I + F + + +E + +F +SR
Sbjct: 161 ISIALYNTAFGLIIAIPTLIFWRYFRSRVDAYLLTLELASEQFVRHISR 209
>gi|303230272|ref|ZP_07317039.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Veillonella atypica ACS-134-V-Col7a]
gi|302515055|gb|EFL57030.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Veillonella atypica ACS-134-V-Col7a]
Length = 205
Score = 35.0 bits (79), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 50/97 (51%), Gaps = 6/97 (6%)
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSI-AGYYSNNVVSIPGIIESLISILLGLCVSI 190
+ +L + + L+G+LG V GM+G F + AG ++ + G+ E+LI+ GLCV+I
Sbjct: 112 MDYLSATVTISPLLGLLGTVTGMIGSFSILDAGAGASAITG--GVGEALIATASGLCVAI 169
Query: 191 PSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEG 227
+ I Y F Q+E N I++ + EG
Sbjct: 170 MAFIVYTFFSHRLDSIINQIE---NMCVNIITAKREG 203
>gi|262198295|ref|YP_003269504.1| MotA/TolQ/ExbB proton channel [Haliangium ochraceum DSM 14365]
gi|262081642|gb|ACY17611.1| MotA/TolQ/ExbB proton channel [Haliangium ochraceum DSM 14365]
Length = 234
Score = 35.0 bits (79), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 47/94 (50%), Gaps = 6/94 (6%)
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI-----AGYYSNNVVSI-PGIIE 177
EL+ L L + A L+G+LG V+GM+G F + A S +V + GI
Sbjct: 101 ELQRFESSLGLLSFTAQAAPLLGLLGTVIGMVGVFIDMGQGADAAARSVDVGHLSSGIWT 160
Query: 178 SLISILLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
+L++ GL V++P+ A+ +++ +++
Sbjct: 161 ALLTTAAGLIVAVPTLAAHGYLSACAERLRLRLH 194
>gi|209573878|gb|ACI62877.1| TonB system transport protein ExbB1 [Acidithiobacillus thiooxidans]
Length = 215
Score = 35.0 bits (79), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 47/100 (47%), Gaps = 4/100 (4%)
Query: 114 DRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA--GYYSNNVVS 171
D +D AI + ++L L + + L+G+ G +LGM F +A G+ V
Sbjct: 101 DNRLDEAIFLTTPFLDKRLWILDTTVTLAPLLGLFGTILGMFHAFSILAAPGHAPTQVTG 160
Query: 172 IPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
G+ ++LI+ GL +++ I +N F K Q+E
Sbjct: 161 --GVADALIATASGLFIAMVGLITFNAFNNAIDKTIQQLE 198
>gi|198284693|ref|YP_002221014.1| MotA/TolQ/ExbB proton channel [Acidithiobacillus ferrooxidans ATCC
53993]
gi|218665964|ref|YP_002427370.1| MotA/TolQ/ExbB proton channel family protein [Acidithiobacillus
ferrooxidans ATCC 23270]
gi|198249214|gb|ACH84807.1| MotA/TolQ/ExbB proton channel [Acidithiobacillus ferrooxidans ATCC
53993]
gi|218518177|gb|ACK78763.1| MotA/TolQ/ExbB proton channel family protein [Acidithiobacillus
ferrooxidans ATCC 23270]
Length = 215
Score = 35.0 bits (79), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 47/100 (47%), Gaps = 4/100 (4%)
Query: 114 DRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA--GYYSNNVVS 171
D +D AI + ++L L + + L+G+ G +LGM F +A G+ V
Sbjct: 101 DNRLDEAIFLTTPFLDKRLWILDTTVTLAPLLGLFGTILGMFHAFSILATPGHAPTQVTG 160
Query: 172 IPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
G+ ++LI+ GL +++ I +N F K Q+E
Sbjct: 161 --GVADALIATASGLFIAMVGLITFNAFNNAIDKTIQQLE 198
>gi|302036398|ref|YP_003796720.1| biopolymer transport protein Exbb [Candidatus Nitrospira defluvii]
gi|300604462|emb|CBK40794.1| Biopolymer transport protein ExbB [Candidatus Nitrospira defluvii]
Length = 143
Score = 35.0 bits (79), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 44/72 (61%), Gaps = 3/72 (4%)
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLG 185
+T++L +G++++ +G+LG VLG+M F ++ +G + N + I G+ +L + +G
Sbjct: 52 LTKRLVIIGTVAANAPYIGLLGTVLGIMMTFHTMGTSGTMAVNTIMI-GLSLALKATAVG 110
Query: 186 LCVSIPSSIAYN 197
L V+IP + N
Sbjct: 111 LLVAIPCVVMNN 122
>gi|224438005|ref|ZP_03658944.1| biopolymer transport protein [Helicobacter cinaedi CCUG 18818]
gi|313144451|ref|ZP_07806644.1| biopolymer transport protein [Helicobacter cinaedi CCUG 18818]
gi|313129482|gb|EFR47099.1| biopolymer transport protein [Helicobacter cinaedi CCUG 18818]
Length = 142
Score = 35.0 bits (79), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILL 184
E +++ L+ L + S VG+LG V+G+M F + + SI G+ +L + L
Sbjct: 50 EALSKNLTALYIIYSNAPYVGLLGTVVGIMITFYDMGMSGGMDAQSIMVGLSTALKATAL 109
Query: 185 GLCVSIPSSIAYNKFIE 201
GL V+IP+ I YN F+
Sbjct: 110 GLVVAIPTLIVYNCFVR 126
>gi|224418154|ref|ZP_03656160.1| biopolymer transport protein ExbB [Helicobacter canadensis MIT
98-5491]
gi|253827481|ref|ZP_04870366.1| biopolymer transport protein exbB [Helicobacter canadensis MIT
98-5491]
gi|313141689|ref|ZP_07803882.1| biopolymer transport protein exbb [Helicobacter canadensis MIT
98-5491]
gi|253510887|gb|EES89546.1| biopolymer transport protein exbB [Helicobacter canadensis MIT
98-5491]
gi|313130720|gb|EFR48337.1| biopolymer transport protein exbb [Helicobacter canadensis MIT
98-5491]
Length = 157
Score = 35.0 bits (79), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Query: 124 ELE-EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLIS 181
ELE ++++ L+ + ++ S VG+LG V G++ F I + +I G+ +L +
Sbjct: 49 ELEIDLSKNLTLIATIGSNAPYVGLLGTVFGIIMTFVQIGQLGMVDTANIMTGLALALQA 108
Query: 182 ILLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
GL V+IPS I YN + S+ Q E
Sbjct: 109 TAGGLLVAIPSIIFYNLLMRKSEVLVAQWE 138
>gi|78357197|ref|YP_388646.1| biopolymer transport protein ExbB-like [Desulfovibrio desulfuricans
subsp. desulfuricans str. G20]
gi|78219602|gb|ABB38951.1| outer membrane transport energization protein ExbB [Desulfovibrio
desulfuricans subsp. desulfuricans str. G20]
Length = 208
Score = 35.0 bits (79), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 144 LVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISILLGLCVSIPSSIAYNKFIED 202
L+G+LG V GM+ F I+ + + N ++ GI E+L++ GL +IP +
Sbjct: 119 LLGLLGTVSGMISTFNVISQFGTGNARALASGISEALVTTQSGLVAAIPGLLMAAILARR 178
Query: 203 SKKFAMQMEGF 213
+ K +ME F
Sbjct: 179 ADKMKKRMEMF 189
>gi|328543786|ref|YP_004303895.1| MotA/TolQ/ExbB proton channel [polymorphum gilvum SL003B-26A1]
gi|326413530|gb|ADZ70593.1| MotA/TolQ/ExbB proton channel [Polymorphum gilvum SL003B-26A1]
Length = 239
Score = 35.0 bits (79), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 47/96 (48%), Gaps = 2/96 (2%)
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLIS 181
+L + L L +S L+G+LG VLGM+ F+++ AG + V GI +L++
Sbjct: 117 QLAALRAYLRPLDMISQTAPLIGLLGTVLGMIEAFRAMQGAGAAVDPSVLAGGIWVALLT 176
Query: 182 ILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEF 217
+GL ++IP S F ++ +ME F
Sbjct: 177 TAVGLSIAIPVSAVVGWFDGIIEREQNEMEALVTAF 212
>gi|297568822|ref|YP_003690166.1| tonB-system energizer ExbB [Desulfurivibrio alkaliphilus AHT2]
gi|296924737|gb|ADH85547.1| tonB-system energizer ExbB [Desulfurivibrio alkaliphilus AHT2]
Length = 140
Score = 35.0 bits (79), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 5/88 (5%)
Query: 112 RIDRMMDVAIARELE-EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
R+D D R+LE E+T L +G++ +G+LG VLG+M F + +
Sbjct: 38 RLDEFKD---KRKLELELTGNLHLIGTVGRNAPYLGLLGTVLGIMLTFYDMGASGRMDAG 94
Query: 171 SI-PGIIESLISILLGLCVSIPSSIAYN 197
I G+ +L GL V+IP+ AYN
Sbjct: 95 QIMVGLSLALKVTAAGLLVAIPAVTAYN 122
>gi|319956264|ref|YP_004167527.1| outer membrane transport energization protein exbb [Nitratifractor
salsuginis DSM 16511]
gi|319418668|gb|ADV45778.1| outer membrane transport energization protein ExbB [Nitratifractor
salsuginis DSM 16511]
Length = 145
Score = 35.0 bits (79), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 47/92 (51%), Gaps = 5/92 (5%)
Query: 115 RMMDVAIARELE----EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
R +D+A R E ++T + L S+ S+ +G+LG VLG++ F + +
Sbjct: 37 RKIDLASYRHKEALETDLTANTTILSSIGSSAPYIGLLGTVLGIIITFYLLGQTKQMDAG 96
Query: 171 SI-PGIIESLISILLGLCVSIPSSIAYNKFIE 201
SI + +L + +GL V+IPS + YN +
Sbjct: 97 SIMTSLSLALKATAMGLVVAIPSMLFYNHVVR 128
>gi|313896247|ref|ZP_07829800.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Selenomonas sp. oral taxon 137 str. F0430]
gi|320530757|ref|ZP_08031801.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Selenomonas artemidis F0399]
gi|312975046|gb|EFR40508.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Selenomonas sp. oral taxon 137 str. F0430]
gi|320137044|gb|EFW28982.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Selenomonas artemidis F0399]
Length = 240
Score = 35.0 bits (79), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 52/101 (51%), Gaps = 2/101 (1%)
Query: 112 RIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVS 171
+++ M+V L + +L +L + + L+G+LG + GM+ F S+ + + +
Sbjct: 103 KMNSYMEVQSGIALSKFRNRLYYLSVVVTMAPLLGLLGTISGMISTF-SVFNLDAGDPTA 161
Query: 172 IP-GIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
I G+ E+LI+ +GLCV+I + + F + + ME
Sbjct: 162 ITGGVGEALIATAMGLCVAIIALAVHAYFSQRIENIVTDME 202
>gi|163796014|ref|ZP_02189977.1| MotA/TolQ/ExbB proton channel [alpha proteobacterium BAL199]
gi|159178769|gb|EDP63307.1| MotA/TolQ/ExbB proton channel [alpha proteobacterium BAL199]
Length = 255
Score = 35.0 bits (79), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 85/180 (47%), Gaps = 18/180 (10%)
Query: 19 QMGLAVKCIITLLFIFSILSWSVIIQK----SVNFITLRRQFREFEQLFWSGQSLETVCK 74
+M A ++ +L S+++ ++I+ K +++ + R R L +G+S+E +
Sbjct: 27 EMVTAGGPVVAVLAAMSVVALAIILVKLWQFAMSRVGDRTTARRALALHRAGRSIEAIDA 86
Query: 75 SLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIA-RELEEITEKLS 133
+ ++ + + + ++ + R + + DR+ D+ + R LE I
Sbjct: 87 AARSRNPVAQVVACAVRGTLYRDLPEAMVREEVA-RLATDRIEDLRMYFRPLEVI----- 140
Query: 134 FLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGLCVSIP 191
+S L+G+ G VLGM+ F+ + AG + + GI E+L++ +GL V+IP
Sbjct: 141 -----ASVAPLLGLFGTVLGMIEAFRQLEQAGSQVDPSILSGGIWEALLTTAVGLAVAIP 195
>gi|320355204|ref|YP_004196543.1| outer membrane transport energization protein ExbB [Desulfobulbus
propionicus DSM 2032]
gi|320123706|gb|ADW19252.1| outer membrane transport energization protein ExbB [Desulfobulbus
propionicus DSM 2032]
Length = 143
Score = 35.0 bits (79), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 54/103 (52%), Gaps = 5/103 (4%)
Query: 112 RIDRMMDVAIARELE-EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNN 168
R R+ A + LE ++ KL + ++ + +G+LG VLG+M F I AG+ +
Sbjct: 35 RAVRVEQYADRKVLELHLSHKLHLIATIGANAPYIGLLGTVLGIMLTFYDIGAAGFDTTK 94
Query: 169 VVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
+++ G+ +L + LGL V+IP+ YN + K MQ +
Sbjct: 95 IMT--GLALALKATALGLLVAIPAVTLYNLLLRRCKVLLMQWD 135
>gi|283957014|ref|ZP_06374486.1| putative exbB/tolQ family transport protein [Campylobacter jejuni
subsp. jejuni 1336]
gi|283791515|gb|EFC30312.1| putative exbB/tolQ family transport protein [Campylobacter jejuni
subsp. jejuni 1336]
Length = 141
Score = 35.0 bits (79), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISILL 184
+ I+E L+ + + S +G+LG V+G+M F + + +V SI G+ +L + L
Sbjct: 50 DAISENLTTIYIIYSNAPYIGLLGTVIGIMVTFYEMGLTGNIDVKSIVVGLSLALKATAL 109
Query: 185 GLCVSIPSSIAYNKFIE 201
GL V+IP+ +AYN +
Sbjct: 110 GLLVAIPALMAYNTLLR 126
>gi|283953757|ref|ZP_06371288.1| TonB system transport protein ExbB [Campylobacter jejuni subsp.
jejuni 414]
gi|283794798|gb|EFC33536.1| TonB system transport protein ExbB [Campylobacter jejuni subsp.
jejuni 414]
Length = 123
Score = 34.7 bits (78), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISILL 184
+ I+E L+ + + S +G+LG V+G+M F + + +V SI G+ +L + L
Sbjct: 32 DAISENLTTIYIIYSNAPYIGLLGTVIGIMVTFYEMGLTGNIDVKSIVVGLSLALKATAL 91
Query: 185 GLCVSIPSSIAYNKFIE 201
GL V+IP+ +AYN +
Sbjct: 92 GLLVAIPALMAYNALLR 108
>gi|59713376|ref|YP_206151.1| TolQ protein [Vibrio fischeri ES114]
gi|59481624|gb|AAW87263.1| TolQ protein [Vibrio fischeri ES114]
Length = 451
Score = 34.7 bits (78), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Query: 115 RMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIP 173
R+++ I E + + + LS L +++ ++G+LG V GM+ FQ I + + + V
Sbjct: 331 RLLET-IVDEQQGLEKGLSMLKLLAALAPMLGLLGTVTGMIETFQVITLFGNGDPKVMAG 389
Query: 174 GIIESLISILLGLCVSIPSSIAYN 197
GI +L++ +LGL ++P + +N
Sbjct: 390 GISMALVTTVLGLVAAMPLLLTHN 413
>gi|325286730|ref|YP_004262520.1| MotA/TolQ/ExbB proton channel [Cellulophaga lytica DSM 7489]
gi|324322184|gb|ADY29649.1| MotA/TolQ/ExbB proton channel [Cellulophaga lytica DSM 7489]
Length = 245
Score = 34.7 bits (78), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 91/213 (42%), Gaps = 39/213 (18%)
Query: 5 GLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFW 64
G A M I + L + + +A++ II L S N L+++ E
Sbjct: 51 GPAFMGIVLLCLILGLAVAIERIIYLNM------------ASTNTTKLKQRV---EDALA 95
Query: 65 SG--QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPI---GIQDRIDRMMDV 119
SG ++ + VC++ K +A+IF + +S + ++ + G+Q
Sbjct: 96 SGGVEAAKEVCRNTKGP----VASIFYQGLDRAGESIESAEKAVVAYGGVQ--------- 142
Query: 120 AIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIE-S 178
+ ++ + +S+L + ++G +G V+GM+ FQ IA + + I G I+ +
Sbjct: 143 -----MGQLEKNVSWLSLFIAIAPMLGFMGTVIGMIQAFQKIAAVGNLSASLIAGDIQVA 197
Query: 179 LISILLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
L++ + GL +I I YN I ME
Sbjct: 198 LLTTVFGLVTAIILQIFYNYIIAKIDSIVNDME 230
>gi|283780652|ref|YP_003371407.1| MotA/TolQ/ExbB proton channel [Pirellula staleyi DSM 6068]
gi|283439105|gb|ADB17547.1| MotA/TolQ/ExbB proton channel [Pirellula staleyi DSM 6068]
Length = 313
Score = 34.7 bits (78), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 48/90 (53%), Gaps = 3/90 (3%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQ--SIAGYYSNNVV 170
++ + A ARE + + + +L +S L+G+LG V GM+ F ++ N +
Sbjct: 161 VEHTVSEASAREADRLYGNVRWLNLAASVTPLLGLLGTVQGMILAFHMTTVIDAGQNKSI 220
Query: 171 SIP-GIIESLISILLGLCVSIPSSIAYNKF 199
++ GI +L++ GL V+IP+++ + F
Sbjct: 221 ALAEGIYTALVTTFAGLTVAIPAAMLSHYF 250
>gi|205355642|ref|ZP_03222412.1| putative exbB/tolQ family transport protein [Campylobacter jejuni
subsp. jejuni CG8421]
gi|205346419|gb|EDZ33052.1| putative exbB/tolQ family transport protein [Campylobacter jejuni
subsp. jejuni CG8421]
Length = 141
Score = 34.7 bits (78), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISILL 184
+ I+E L+ + + S +G+LG V+G+M F + + +V SI G+ +L + L
Sbjct: 50 DAISENLTTIYIIYSNAPYIGLLGTVIGIMVTFYEMGLAGNIDVKSIVVGLSLALKATAL 109
Query: 185 GLCVSIPSSIAYNKFIEDS 203
GL V+IP+ +AYN + +
Sbjct: 110 GLLVAIPALMAYNALLRRA 128
>gi|198284027|ref|YP_002220348.1| MotA/TolQ/ExbB proton channel [Acidithiobacillus ferrooxidans ATCC
53993]
gi|218666160|ref|YP_002426671.1| MotA/TolQ/ExbB proton channel family protein [Acidithiobacillus
ferrooxidans ATCC 23270]
gi|198248548|gb|ACH84141.1| MotA/TolQ/ExbB proton channel [Acidithiobacillus ferrooxidans ATCC
53993]
gi|218518373|gb|ACK78959.1| MotA/TolQ/ExbB proton channel family protein [Acidithiobacillus
ferrooxidans ATCC 23270]
Length = 230
Score = 34.7 bits (78), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 17/86 (19%), Positives = 42/86 (48%)
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLG 185
++ +L L ++ + L+G+ G ++GM F + G+ ++L++ G
Sbjct: 107 PQLDRRLWLLDTIITLAPLLGLFGTIIGMFHAFSVLTAPGHAPTAVTGGVADALVATATG 166
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQME 211
L V++ +A+N F ++ +Q++
Sbjct: 167 LFVAMTGLVAFNAFNNQVRQILLQLD 192
>gi|169333702|ref|ZP_02860895.1| hypothetical protein ANASTE_00086 [Anaerofustis stercorihominis DSM
17244]
gi|169259551|gb|EDS73517.1| hypothetical protein ANASTE_00086 [Anaerofustis stercorihominis DSM
17244]
Length = 503
Score = 34.7 bits (78), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 15/77 (19%)
Query: 151 VLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQM 210
V G++G F ++ G+ ++N+ SI G++ I IL GL +N E + M
Sbjct: 228 VEGVIGIFLTLLGFVTDNITSIAGVLSGFIKILRGL---------FNGDTE------LIM 272
Query: 211 EGFANEFSAILSRQTEG 227
EGF F L R +G
Sbjct: 273 EGFKEIFDNTLGRVWKG 289
>gi|124010639|ref|ZP_01695241.1| MotA/TolQ/ExbB proton channel family protein [Microscilla marina
ATCC 23134]
gi|123982152|gb|EAY23787.1| MotA/TolQ/ExbB proton channel family protein [Microscilla marina
ATCC 23134]
Length = 278
Score = 34.7 bits (78), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 60/132 (45%), Gaps = 15/132 (11%)
Query: 94 EWKKSCDKGARSPIG---------IQDRIDRMMDVAIAR---ELEEITEKLSFLGSMSSA 141
E K + R P+ I + ID + I+ E+ ++ + +S++ +
Sbjct: 129 EKAKEVTRNTRGPVASIFTQGLMRISEGIDMVEKSVISYGSVEMGKLEKGISWISLFIAL 188
Query: 142 GLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKF 199
++G +G V+GM+ F I AG S +V+ GI +LI+ + GL V+I I YN
Sbjct: 189 APMLGFMGTVIGMIDAFDQIQAAGDVSPQIVA-GGIKVALITTVSGLIVAIILQIFYNYI 247
Query: 200 IEDSKKFAMQME 211
+ QME
Sbjct: 248 VSKVDSIVNQME 259
>gi|254293574|ref|YP_003059597.1| MotA/TolQ/ExbB proton channel [Hirschia baltica ATCC 49814]
gi|254042105|gb|ACT58900.1| MotA/TolQ/ExbB proton channel [Hirschia baltica ATCC 49814]
Length = 455
Score = 34.7 bits (78), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 49/86 (56%), Gaps = 4/86 (4%)
Query: 110 QDRIDRM---MDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYS 166
QD ++ + +D AI +E +I ++ + +++ ++G+LG V+GM+ F I +
Sbjct: 331 QDDVEALELRLDEAILKETPKIDSFVNLIKVLAAVSPMMGLLGTVVGMIRTFTQITLVGT 390
Query: 167 NNVVSIP-GIIESLISILLGLCVSIP 191
+ ++ GI ++L++ + GL +IP
Sbjct: 391 GDPKTMADGISQALVTTVEGLVAAIP 416
>gi|86152288|ref|ZP_01070499.1| TonB system transport protein ExbB [Campylobacter jejuni subsp.
jejuni 260.94]
gi|86153030|ref|ZP_01071235.1| biopolymer transport exbB protein [Campylobacter jejuni subsp.
jejuni HB93-13]
gi|315125035|ref|YP_004067039.1| TonB system transport protein ExbB [Campylobacter jejuni subsp.
jejuni ICDCCJ07001]
gi|85840777|gb|EAQ58028.1| TonB system transport protein ExbB [Campylobacter jejuni subsp.
jejuni 260.94]
gi|85843915|gb|EAQ61125.1| biopolymer transport exbB protein [Campylobacter jejuni subsp.
jejuni HB93-13]
gi|315018757|gb|ADT66850.1| TonB system transport protein ExbB [Campylobacter jejuni subsp.
jejuni ICDCCJ07001]
Length = 123
Score = 34.7 bits (78), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISILL 184
+ I+E L+ + + S +G+LG V+G+M F + + +V SI G+ +L + L
Sbjct: 32 DAISENLTTIYIIYSNAPYIGLLGTVIGIMVTFYEMGLAGNIDVKSIVVGLSLALKATAL 91
Query: 185 GLCVSIPSSIAYNKFIE 201
GL V+IP+ +AYN +
Sbjct: 92 GLLVAIPALMAYNALLR 108
Searching..................................................done
Results from round 2
>gi|254780551|ref|YP_003064964.1| tolQ protein [Candidatus Liberibacter asiaticus str. psy62]
gi|254040228|gb|ACT57024.1| tolQ protein [Candidatus Liberibacter asiaticus str. psy62]
Length = 230
Score = 280 bits (717), Expect = 9e-74, Method: Composition-based stats.
Identities = 230/230 (100%), Positives = 230/230 (100%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE
Sbjct: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
Query: 61 QLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVA 120
QLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVA
Sbjct: 61 QLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVA 120
Query: 121 IARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLI 180
IARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLI
Sbjct: 121 IARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLI 180
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS
Sbjct: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
>gi|222149660|ref|YP_002550617.1| protein TolQ [Agrobacterium vitis S4]
gi|221736642|gb|ACM37605.1| protein TolQ [Agrobacterium vitis S4]
Length = 239
Score = 268 bits (687), Expect = 3e-70, Method: Composition-based stats.
Identities = 119/232 (51%), Positives = 163/232 (70%), Gaps = 3/232 (1%)
Query: 1 MNNYGLAI--MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFRE 58
M GLA D+S++ALFMQ G VK ++ L S+ +W+++I K V+F RRQF +
Sbjct: 1 MEQVGLAAASHDVSLWALFMQAGWVVKIVMIGLLGASVWTWAIVIDKYVSFAKARRQFDQ 60
Query: 59 FEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMD 118
FEQ+FWSGQSLE + ++L +N GLAAIF+SAM EWKKS ++GARSPIG+Q RIDR MD
Sbjct: 61 FEQVFWSGQSLEELYRTLAERNNTGLAAIFVSAMREWKKSFERGARSPIGLQMRIDRSMD 120
Query: 119 VAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIE 177
V +ARE E +L L ++ SAG +G+ G V+G+M FQ+IAG S N+ V PGI E
Sbjct: 121 VTMAREAEHFEARLGSLATIGSAGPFIGLFGTVIGIMTSFQAIAGSKSTNLAVVAPGIAE 180
Query: 178 SLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNI 229
+L++ +GL +IP+ IAYNKF ++ K + +MEGFA+EFSAILSRQ + +
Sbjct: 181 ALLATAIGLVAAIPAVIAYNKFSGEAGKLSSRMEGFADEFSAILSRQIDEKL 232
>gi|159185874|ref|NP_356903.2| tolQ protein [Agrobacterium tumefaciens str. C58]
gi|159141008|gb|AAK89688.2| tolQ Protein [Agrobacterium tumefaciens str. C58]
Length = 239
Score = 268 bits (686), Expect = 4e-70, Method: Composition-based stats.
Identities = 119/232 (51%), Positives = 163/232 (70%), Gaps = 3/232 (1%)
Query: 1 MNNYGLAI--MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFRE 58
M GLA D+S++ALFMQ G VK ++ L S+ +W+++ K V+F +RQF +
Sbjct: 1 MEQAGLAAATHDVSLWALFMQAGFIVKFVMIGLIAASVWTWAIVFDKYVSFGKAKRQFDQ 60
Query: 59 FEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMD 118
FEQ+FWSGQSLE + ++L N+GLAAIF+SAM EWKKS ++GARSPIG+Q RIDR MD
Sbjct: 61 FEQVFWSGQSLEELYRTLAERQNVGLAAIFVSAMREWKKSFERGARSPIGLQMRIDRAMD 120
Query: 119 VAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIE 177
V IARE E+ +L L ++ SAG +G+ G V+G+M FQ+IAG S N+ V PGI E
Sbjct: 121 VTIAREGEQYEARLGSLATIGSAGPFIGLFGTVVGIMTSFQAIAGSKSTNLAVVAPGIAE 180
Query: 178 SLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNI 229
+L++ +GL +IP+ IAYNKF D+ K + +MEGFA+EFSAILSRQ + +
Sbjct: 181 ALLATAIGLVAAIPAVIAYNKFTADAHKLSARMEGFADEFSAILSRQIDEKL 232
>gi|332716446|ref|YP_004443912.1| biopolymer transport protein tolQ [Agrobacterium sp. H13-3]
gi|325063131|gb|ADY66821.1| biopolymer transport protein tolQ [Agrobacterium sp. H13-3]
Length = 239
Score = 268 bits (685), Expect = 6e-70, Method: Composition-based stats.
Identities = 120/232 (51%), Positives = 164/232 (70%), Gaps = 3/232 (1%)
Query: 1 MNNYGLAI--MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFRE 58
M GLA D+S++ALFMQ GL VK ++ L S+ +W+++ K V+F +RQF +
Sbjct: 1 MEQAGLAAATHDVSLWALFMQAGLIVKFVMIGLIAASVWTWAIVFDKYVSFGKAKRQFDQ 60
Query: 59 FEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMD 118
FEQ+FWSGQSLE + ++L N+GLAAIF+SAM EWKKS ++GARSPIG+Q RIDR MD
Sbjct: 61 FEQVFWSGQSLEELYRTLAERQNVGLAAIFVSAMREWKKSFERGARSPIGLQMRIDRAMD 120
Query: 119 VAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIE 177
V IARE E+ +L L ++ SAG +G+ G V+G+M FQ+IAG S N+ V PGI E
Sbjct: 121 VTIAREGEQYEARLGSLATIGSAGPFIGLFGTVVGIMTSFQAIAGSKSTNLAVVAPGIAE 180
Query: 178 SLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNI 229
+L++ +GL +IP+ IAYNKF D+ K + +MEGFA+EFSAILSRQ + +
Sbjct: 181 ALLATAIGLVAAIPAVIAYNKFTADAHKLSARMEGFADEFSAILSRQIDEKL 232
>gi|154252566|ref|YP_001413390.1| Tol-Pal system TolQ [Parvibaculum lavamentivorans DS-1]
gi|154156516|gb|ABS63733.1| Tol-Pal system TolQ [Parvibaculum lavamentivorans DS-1]
Length = 241
Score = 267 bits (682), Expect = 1e-69, Method: Composition-based stats.
Identities = 86/222 (38%), Positives = 140/222 (63%), Gaps = 1/222 (0%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
+D S++ LF++ L VK ++ L S+ SW++I K F + R+ +FE++FWSG+
Sbjct: 19 PLDFSMWGLFLRADLVVKLVMLGLLFASVWSWAIIFDKWWRFARVERRADQFERIFWSGR 78
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
SL+ + + + + L+A+F++AM EW++S D A S +G+++R+D++M V I+RE+
Sbjct: 79 SLDELYQEMGHRPQHPLSALFIAAMREWRRSQDVVASSFVGLKERVDKVMQVTISREMMN 138
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
+ +L FL ++ S +G+ G V G+M FQSIA N+ V PGI E+L + LGL
Sbjct: 139 LESRLLFLATVGSVAPFIGLFGTVWGIMNSFQSIAISRDTNLAVVAPGIAEALFATALGL 198
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
+IP+ +AYN+F S + +ME FA+EFSAILSRQ +
Sbjct: 199 VAAIPAVVAYNRFSNQSSRIGQRMESFADEFSAILSRQLDER 240
>gi|86359057|ref|YP_470949.1| protein transporter protein [Rhizobium etli CFN 42]
gi|218672504|ref|ZP_03522173.1| protein transporter protein [Rhizobium etli GR56]
gi|86283159|gb|ABC92222.1| protein transporter protein [Rhizobium etli CFN 42]
gi|327193470|gb|EGE60366.1| protein transporter protein [Rhizobium etli CNPAF512]
Length = 239
Score = 265 bits (678), Expect = 4e-69, Method: Composition-based stats.
Identities = 116/232 (50%), Positives = 164/232 (70%), Gaps = 3/232 (1%)
Query: 1 MNNYGLAI--MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFRE 58
M GLA D+S+++LFMQ G+ VK ++ L S+ +W+++I K + + RRQF +
Sbjct: 1 MEQVGLAAATTDVSLWSLFMQAGIVVKLVMLGLIAASVWTWAIVIDKYLAYGRARRQFDK 60
Query: 59 FEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMD 118
FEQ+FWSGQSLE + +SL +N GLA+IF++AM EWKKS ++GARSPIG+Q RIDR MD
Sbjct: 61 FEQVFWSGQSLEELYRSLSERNNTGLASIFVAAMREWKKSFERGARSPIGLQMRIDRAMD 120
Query: 119 VAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIE 177
V +ARE E + +L L ++ SAG +G+ G V+G+M FQ+IAG S N+ V PGI E
Sbjct: 121 VTLARETEYLGARLGSLATIGSAGPFIGLFGTVVGIMTSFQAIAGSKSTNLAVVAPGIAE 180
Query: 178 SLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNI 229
+L++ +GL +IP+ IAYNKF D+ K + +MEGFA+EFSAILSRQ + +
Sbjct: 181 ALLATAIGLVAAIPAVIAYNKFSADAGKLSARMEGFADEFSAILSRQIDEKL 232
>gi|110635503|ref|YP_675711.1| MotA/TolQ/ExbB proton channel [Mesorhizobium sp. BNC1]
gi|110286487|gb|ABG64546.1| Cell division and transport-associated protein TolQ [Chelativorans
sp. BNC1]
Length = 243
Score = 265 bits (677), Expect = 5e-69, Method: Composition-based stats.
Identities = 111/233 (47%), Positives = 158/233 (67%), Gaps = 3/233 (1%)
Query: 1 MNNYGLAIM--DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFRE 58
M + LA D+SI+ALF Q G VK ++ L SI SW++II K ++F +R
Sbjct: 1 MESIELAAPGGDLSIWALFWQAGWVVKLVMIGLLGASIWSWAIIIDKWLSFARMRVALNR 60
Query: 59 FEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMD 118
FEQ+FWSGQSLE + +SL + G+ +IF++AM EWKKS +KGARSP+G+Q RID+ MD
Sbjct: 61 FEQVFWSGQSLEELYRSLSDRKTSGMGSIFVAAMREWKKSFEKGARSPLGLQTRIDKAMD 120
Query: 119 VAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIE 177
+A+ RE+E + KL FL S+ ++ +G+ G V+G+M FQ+IAG S N+ V PGI E
Sbjct: 121 LALTREMERLESKLGFLASVGASAPFIGLFGTVVGIMTSFQAIAGSKSTNLAVVAPGIAE 180
Query: 178 SLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
+L++ +GL +IP+ IAYNK D+ A +MEGFA+EFSAILSRQ + ++
Sbjct: 181 ALLATAIGLLAAIPAVIAYNKLTADAGNIASRMEGFADEFSAILSRQIDEKVA 233
>gi|239832786|ref|ZP_04681115.1| protein TolQ [Ochrobactrum intermedium LMG 3301]
gi|239825053|gb|EEQ96621.1| protein TolQ [Ochrobactrum intermedium LMG 3301]
Length = 236
Score = 264 bits (676), Expect = 6e-69, Method: Composition-based stats.
Identities = 107/233 (45%), Positives = 156/233 (66%), Gaps = 3/233 (1%)
Query: 1 MNNYGLAIM--DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFRE 58
M N LA D++++ LFMQ VK ++ L SI +W++I+ K++ + RR
Sbjct: 1 MENVALAAPAADVTLWGLFMQANWVVKLVMLGLLFASIWTWAIIVDKTIAYGRARRAIDR 60
Query: 59 FEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMD 118
FEQ FWSGQSLE + ++L G+A+IFM+AM EWKKS +KGARSPIG+Q RID+ MD
Sbjct: 61 FEQTFWSGQSLEELYRNLGERRTTGMASIFMAAMREWKKSFEKGARSPIGLQMRIDKAMD 120
Query: 119 VAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIE 177
VA+ARE E++ +L FL ++ SA +G+ G V+G+M FQ+IA + ++ V PGI E
Sbjct: 121 VALAREGEKLESRLGFLATIGSAAPFIGLFGTVVGIMTSFQAIAASKNTSLAVVAPGIAE 180
Query: 178 SLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
+L++ +GL +IP+ IAYNK D+ K ++EGFA+EFSAILSRQ + ++
Sbjct: 181 ALLATAIGLLAAIPAVIAYNKLSADAGKIGGRLEGFADEFSAILSRQIDEKLT 233
>gi|190893279|ref|YP_001979821.1| biopolymer transporter protein [Rhizobium etli CIAT 652]
gi|209550780|ref|YP_002282697.1| protein TolQ [Rhizobium leguminosarum bv. trifolii WSM2304]
gi|190698558|gb|ACE92643.1| biopolymer transporter protein [Rhizobium etli CIAT 652]
gi|209536536|gb|ACI56471.1| protein TolQ [Rhizobium leguminosarum bv. trifolii WSM2304]
Length = 239
Score = 264 bits (675), Expect = 8e-69, Method: Composition-based stats.
Identities = 116/232 (50%), Positives = 164/232 (70%), Gaps = 3/232 (1%)
Query: 1 MNNYGLAI--MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFRE 58
M GLA D+S+++LFMQ G+ VK ++ L S+ +W+++I K + + RRQF +
Sbjct: 1 MEQVGLAAATTDVSLWSLFMQAGIVVKLVMLGLIAASVWTWAIVIDKYLAYGRARRQFDK 60
Query: 59 FEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMD 118
FEQ+FWSGQSLE + +SL +N GLAAIF++AM EWKKS ++GARSPIG+Q RIDR MD
Sbjct: 61 FEQVFWSGQSLEELYRSLSERNNTGLAAIFVAAMREWKKSFERGARSPIGLQMRIDRAMD 120
Query: 119 VAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIE 177
V ++RE E + +L L ++ SAG +G+ G V+G+M FQ+IAG S N+ V PGI E
Sbjct: 121 VTLSRESEFLGARLGSLATIGSAGPFIGLFGTVVGIMTSFQAIAGSKSTNLAVVAPGIAE 180
Query: 178 SLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNI 229
+L++ +GL +IP+ IAYNKF D+ K + +MEGFA+EFSAILSRQ + +
Sbjct: 181 ALLATAIGLVAAIPAVIAYNKFSADAGKLSGRMEGFADEFSAILSRQIDEKL 232
>gi|116253712|ref|YP_769550.1| TolQ protein uptake system component [Rhizobium leguminosarum bv.
viciae 3841]
gi|115258360|emb|CAK09463.1| putative TolQ protein uptake system component [Rhizobium
leguminosarum bv. viciae 3841]
Length = 239
Score = 263 bits (674), Expect = 9e-69, Method: Composition-based stats.
Identities = 117/232 (50%), Positives = 164/232 (70%), Gaps = 3/232 (1%)
Query: 1 MNNYGLAI--MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFRE 58
M GLA D+S+++LFMQ G+ VK ++ L S+ +W+++I K + + RRQF +
Sbjct: 1 MEQVGLAAATTDVSLWSLFMQAGIVVKLVMLGLIAASVWTWAIVIDKYLAYGRARRQFDK 60
Query: 59 FEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMD 118
FEQ+FWSGQSLE + +SL +N GLAAIF++AM EWKKS ++GARSPIG+Q RIDR MD
Sbjct: 61 FEQVFWSGQSLEELYRSLSERNNTGLAAIFVAAMREWKKSFERGARSPIGLQMRIDRAMD 120
Query: 119 VAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIE 177
V +ARE E + +L L ++ SAG +G+ G V+G+M FQ+IAG S N+ V PGI E
Sbjct: 121 VTLARETEFLGARLGSLATIGSAGPFIGLFGTVVGIMTSFQAIAGSKSTNLAVVAPGIAE 180
Query: 178 SLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNI 229
+L++ +GL +IP+ IAYNKF D+ K + +MEGFA+EFSAILSRQ + +
Sbjct: 181 ALLATAIGLVAAIPAVIAYNKFSADAGKLSGRMEGFADEFSAILSRQIDEKL 232
>gi|241206188|ref|YP_002977284.1| protein TolQ [Rhizobium leguminosarum bv. trifolii WSM1325]
gi|240860078|gb|ACS57745.1| protein TolQ [Rhizobium leguminosarum bv. trifolii WSM1325]
Length = 239
Score = 263 bits (674), Expect = 1e-68, Method: Composition-based stats.
Identities = 117/232 (50%), Positives = 163/232 (70%), Gaps = 3/232 (1%)
Query: 1 MNNYGLAI--MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFRE 58
M GLA D+S+++LFMQ G+ VK ++ L S+ +W+++I K + + RRQF +
Sbjct: 1 MEQVGLAAATTDVSLWSLFMQAGIVVKLVMLGLIAASVWTWAIVIDKYLAYGRARRQFDK 60
Query: 59 FEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMD 118
FEQ+FWSGQSLE + +SL N GLAAIF++AM EWKKS ++GARSPIG+Q RIDR MD
Sbjct: 61 FEQVFWSGQSLEELYRSLSERSNTGLAAIFVAAMREWKKSFERGARSPIGLQMRIDRAMD 120
Query: 119 VAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIE 177
V +ARE E + +L L ++ SAG +G+ G V+G+M FQ+IAG S N+ V PGI E
Sbjct: 121 VTLARETEFLGARLGSLATIGSAGPFIGLFGTVVGIMTSFQAIAGSKSTNLAVVAPGIAE 180
Query: 178 SLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNI 229
+L++ +GL +IP+ IAYNKF D+ K + +MEGFA+EFSAILSRQ + +
Sbjct: 181 ALLATAIGLVAAIPAVIAYNKFSADAGKLSGRMEGFADEFSAILSRQIDEKL 232
>gi|114706801|ref|ZP_01439701.1| putative transport transmembrane protein [Fulvimarina pelagi
HTCC2506]
gi|114537749|gb|EAU40873.1| putative transport transmembrane protein [Fulvimarina pelagi
HTCC2506]
Length = 241
Score = 263 bits (673), Expect = 1e-68, Method: Composition-based stats.
Identities = 101/220 (45%), Positives = 150/220 (68%), Gaps = 1/220 (0%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLET 71
S++ LF Q GL VK ++ L + S+ +W++II K + + +RRQ FE FWSG+SLE
Sbjct: 17 SMWDLFWQAGLIVKLVMIGLVVASVWTWAIIIDKVMRYAAMRRQLNNFENQFWSGRSLEE 76
Query: 72 VCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEK 131
+ ++L + G+ A+F++AM EWKKS +KGARSPIG+Q RI++ MDV +ARE++ + +
Sbjct: 77 LYQTLVDRKPTGMGAVFVAAMREWKKSFEKGARSPIGLQQRIEKAMDVTLAREMDHLESR 136
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSI 190
L FL ++ SA VG+ G V+G+M FQ+IAG ++ V PGI E+L++ +GL +I
Sbjct: 137 LGFLATIGSAAPFVGLFGTVIGIMTSFQAIAGSQQTSLAVVAPGIAEALLATAIGLVAAI 196
Query: 191 PSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
P+ IAYNK D+ K M+ME FA+EFS+ILSRQ + S
Sbjct: 197 PAVIAYNKLTADAGKIGMRMESFADEFSSILSRQIDERQS 236
>gi|13473333|ref|NP_104900.1| TolQ protein, inner membrane protein, tolerance to group A colicins
[Mesorhizobium loti MAFF303099]
gi|14024082|dbj|BAB50686.1| inner membrane protein; TolQ [Mesorhizobium loti MAFF303099]
Length = 236
Score = 263 bits (673), Expect = 1e-68, Method: Composition-based stats.
Identities = 105/233 (45%), Positives = 158/233 (67%), Gaps = 3/233 (1%)
Query: 1 MNNYGLAIM--DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFRE 58
M N LA +SI+ALFMQ VK ++ L S+ +W++II K V + +R
Sbjct: 1 MENIALADPGAQLSIWALFMQASWVVKLVMIGLLCASVWTWAIIIDKLVAYGRMRLALNR 60
Query: 59 FEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMD 118
FEQ+FWSGQSLE + ++L + G+ AIF++AM EWKKS +KGA++P+G+Q RID+ MD
Sbjct: 61 FEQVFWSGQSLEELYRTLADRKTSGMGAIFVAAMREWKKSFEKGAKTPLGLQTRIDKAMD 120
Query: 119 VAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIE 177
+A+ RE+E++ +L FL + SA +G+ G V+G+M FQ+IAG + ++ V PGI E
Sbjct: 121 LALTREMEKLEGRLGFLATTGSAAPFIGLFGTVIGIMTSFQAIAGSKNTSLAVVAPGIAE 180
Query: 178 SLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
+L++ +GL +IP+ IAYNK D+ K A++MEGF++EFSAILSRQ + ++
Sbjct: 181 ALLATAIGLLAAIPAVIAYNKLSSDASKLAVRMEGFSDEFSAILSRQIDEKVA 233
>gi|153008546|ref|YP_001369761.1| Tol-Pal system TolQ [Ochrobactrum anthropi ATCC 49188]
gi|151560434|gb|ABS13932.1| Tol-Pal system TolQ [Ochrobactrum anthropi ATCC 49188]
Length = 236
Score = 263 bits (673), Expect = 1e-68, Method: Composition-based stats.
Identities = 107/233 (45%), Positives = 156/233 (66%), Gaps = 3/233 (1%)
Query: 1 MNNYGLAIM--DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFRE 58
M N LA D++++ LFMQ VK ++ L SI +W++I+ K++ + RR
Sbjct: 1 MENVALAAPAADVTLWGLFMQANWVVKLVMLGLLFASIWTWAIIVDKTIAYGRARRAIDR 60
Query: 59 FEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMD 118
FEQ FWSGQSLE + ++L G+A+IFM+AM EWKKS +KGARSPIG+Q RID+ MD
Sbjct: 61 FEQTFWSGQSLEELYRNLGERRTTGMASIFMAAMREWKKSFEKGARSPIGLQMRIDKAMD 120
Query: 119 VAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIE 177
VA+ARE E++ +L FL ++ SA +G+ G V+G+M FQ+IA + ++ V PGI E
Sbjct: 121 VALARESEKLDSRLGFLATIGSAAPFIGLFGTVVGIMTSFQAIAASKNTSLAVVAPGIAE 180
Query: 178 SLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
+L++ +GL +IP+ IAYNK D+ K ++EGFA+EFSAILSRQ + ++
Sbjct: 181 ALLATAIGLLAAIPAVIAYNKLSADAGKIGGRLEGFADEFSAILSRQIDEKLT 233
>gi|227823311|ref|YP_002827283.1| putative TolQ protein uptake system component [Sinorhizobium fredii
NGR234]
gi|227342312|gb|ACP26530.1| putative TolQ protein uptake system component [Sinorhizobium fredii
NGR234]
Length = 239
Score = 263 bits (673), Expect = 1e-68, Method: Composition-based stats.
Identities = 111/231 (48%), Positives = 161/231 (69%), Gaps = 2/231 (0%)
Query: 1 MNNYGLAIM-DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREF 59
M GLA D+++++LFMQ GL VK ++ L S+ +W++++ KS+N+ +RRQ F
Sbjct: 1 MEQVGLAATSDVTLWSLFMQAGLVVKLVMLGLIAASVWTWAIVVDKSLNYGRVRRQLDNF 60
Query: 60 EQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDV 119
EQ+FWSGQSLE + ++L + G+ AIF+SAM EWKKS ++GARSPIG+Q RIDR MDV
Sbjct: 61 EQVFWSGQSLEELYRTLSDRQTTGMGAIFVSAMREWKKSFERGARSPIGLQMRIDRAMDV 120
Query: 120 AIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIES 178
+ARE E + +L L ++ S+ +G+ G V+G+M FQ+IAG S N+ V PGI E+
Sbjct: 121 TLARESESLEARLGSLATIGSSAPFIGLFGTVVGIMTSFQAIAGSKSTNLAVVAPGIAEA 180
Query: 179 LISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNI 229
L++ +GL +IP+ IAYNKF D+ K + +ME FA+EFSAILSRQ + +
Sbjct: 181 LLATAIGLLAAIPAVIAYNKFTADAGKLSARMEAFADEFSAILSRQIDEKL 231
>gi|148560345|ref|YP_001259552.1| protein TolQ [Brucella ovis ATCC 25840]
gi|148371602|gb|ABQ61581.1| protein TolQ [Brucella ovis ATCC 25840]
Length = 236
Score = 262 bits (669), Expect = 4e-68, Method: Composition-based stats.
Identities = 105/233 (45%), Positives = 154/233 (66%), Gaps = 3/233 (1%)
Query: 1 MNNYGLAIM--DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFRE 58
M N LA D++++ LFMQ VK ++ L SI +W++I+ K++ + RR
Sbjct: 1 MENVALAAPAADVTLWGLFMQANWVVKLVMLGLLFASIWTWAIIVDKTIAYGRARRAIDR 60
Query: 59 FEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMD 118
FEQ FWSGQSLE + ++L G+A+IFM+AM EWKKS +KGARSPIG+Q RID+ MD
Sbjct: 61 FEQSFWSGQSLEELYRNLSERRTSGMASIFMAAMREWKKSFEKGARSPIGLQMRIDKAMD 120
Query: 119 VAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIE 177
VA+ARE ++ +L FL ++ SA +G+ G V+G+M FQ+IA + ++ V PGI E
Sbjct: 121 VALARESGKLESRLGFLATIGSAAPFIGLFGTVVGIMTSFQAIAASKNTSLAVVAPGIAE 180
Query: 178 SLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
+L++ +GL +IP+ IAYNK D+ K ++EGFA+EFS ILSRQ + ++
Sbjct: 181 ALLATAIGLLAAIPAVIAYNKLSADAGKIGGRLEGFADEFSTILSRQIDEKLT 233
>gi|254719703|ref|ZP_05181514.1| protein TolQ [Brucella sp. 83/13]
gi|265984717|ref|ZP_06097452.1| TolQ protein [Brucella sp. 83/13]
gi|306837838|ref|ZP_07470700.1| protein TolQ [Brucella sp. NF 2653]
gi|306841419|ref|ZP_07474121.1| protein TolQ [Brucella sp. BO2]
gi|306844692|ref|ZP_07477277.1| protein TolQ [Brucella sp. BO1]
gi|264663309|gb|EEZ33570.1| TolQ protein [Brucella sp. 83/13]
gi|306274864|gb|EFM56634.1| protein TolQ [Brucella sp. BO1]
gi|306288525|gb|EFM59877.1| protein TolQ [Brucella sp. BO2]
gi|306407077|gb|EFM63294.1| protein TolQ [Brucella sp. NF 2653]
Length = 236
Score = 262 bits (669), Expect = 4e-68, Method: Composition-based stats.
Identities = 106/233 (45%), Positives = 155/233 (66%), Gaps = 3/233 (1%)
Query: 1 MNNYGLAIM--DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFRE 58
M N LA D++++ LFMQ VK ++ L SI +W++I+ K++ + RR
Sbjct: 1 MENVALAAPAADVTLWGLFMQANWVVKLVMLGLLFASIWTWAIIVDKTIAYGRARRAIDR 60
Query: 59 FEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMD 118
FEQ FWSGQSLE + ++L G+A+IFM+AM EWKKS +KGARSPIG+Q RID+ MD
Sbjct: 61 FEQTFWSGQSLEELYRNLSERRTSGMASIFMAAMREWKKSFEKGARSPIGLQMRIDKAMD 120
Query: 119 VAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIE 177
VA+ARE ++ +L FL ++ SA +G+ G V+G+M FQ+IA + ++ V PGI E
Sbjct: 121 VALARESGKLESRLGFLATIGSAAPFIGLFGTVVGIMTSFQAIAASKNTSLAVVAPGIAE 180
Query: 178 SLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
+L++ +GL +IP+ IAYNK D+ K ++EGFA+EFSAILSRQ + ++
Sbjct: 181 ALLATAIGLLAAIPAVIAYNKLSADAGKIGGRLEGFADEFSAILSRQIDEKLT 233
>gi|222086977|ref|YP_002545511.1| protein TolQ [Agrobacterium radiobacter K84]
gi|221724425|gb|ACM27581.1| protein TolQ [Agrobacterium radiobacter K84]
Length = 240
Score = 261 bits (668), Expect = 4e-68, Method: Composition-based stats.
Identities = 116/233 (49%), Positives = 162/233 (69%), Gaps = 4/233 (1%)
Query: 1 MNNYGLAI---MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFR 57
M LA DI++++LFMQ GL VK ++ L S+ +W+++I K ++F RRQF
Sbjct: 1 MEQVALAAATTPDITLWSLFMQAGLVVKLVMLGLLAASVWTWAIVIDKYLSFARARRQFD 60
Query: 58 EFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMM 117
FEQ+FWSGQSLE + ++L N GL+AIF++AM EWKKS ++GARSPIG+Q RIDR M
Sbjct: 61 HFEQVFWSGQSLEELYRTLSERTNTGLSAIFVAAMREWKKSFERGARSPIGLQMRIDRAM 120
Query: 118 DVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGII 176
DV +ARE E + +L L ++ SAG +G+ G V+G+M FQ+IAG S N+ V PGI
Sbjct: 121 DVTLARESEHLGARLGSLATIGSAGPFIGLFGTVVGIMTSFQAIAGSKSTNLAVVAPGIA 180
Query: 177 ESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNI 229
E+L++ +GL +IP+ IAYNKF D+ K + +MEGFA+EFSAILSRQ + +
Sbjct: 181 EALLATAIGLVAAIPAVIAYNKFSADAGKLSARMEGFADEFSAILSRQIDEKL 233
>gi|17986619|ref|NP_539253.1| TOLQ protein [Brucella melitensis bv. 1 str. 16M]
gi|23502558|ref|NP_698685.1| tolQ protein [Brucella suis 1330]
gi|62290572|ref|YP_222365.1| TolQ protein [Brucella abortus bv. 1 str. 9-941]
gi|82700488|ref|YP_415062.1| MotA/TolQ/ExbB proton channel [Brucella melitensis biovar Abortus
2308]
gi|161619629|ref|YP_001593516.1| protein TolQ [Brucella canis ATCC 23365]
gi|163845279|ref|YP_001622934.1| protein TolQ [Brucella suis ATCC 23445]
gi|189024790|ref|YP_001935558.1| MotA/TolQ/ExbB proton channel [Brucella abortus S19]
gi|225628268|ref|ZP_03786302.1| protein TolQ [Brucella ceti str. Cudo]
gi|225853155|ref|YP_002733388.1| protein TolQ [Brucella melitensis ATCC 23457]
gi|237816077|ref|ZP_04595073.1| protein TolQ [Brucella abortus str. 2308 A]
gi|254689868|ref|ZP_05153122.1| protein TolQ [Brucella abortus bv. 6 str. 870]
gi|254694361|ref|ZP_05156189.1| protein TolQ [Brucella abortus bv. 3 str. Tulya]
gi|254698019|ref|ZP_05159847.1| protein TolQ [Brucella abortus bv. 2 str. 86/8/59]
gi|254700361|ref|ZP_05162189.1| protein TolQ [Brucella suis bv. 5 str. 513]
gi|254703478|ref|ZP_05165306.1| protein TolQ [Brucella suis bv. 3 str. 686]
gi|254708432|ref|ZP_05170260.1| protein TolQ [Brucella pinnipedialis M163/99/10]
gi|254708714|ref|ZP_05170525.1| protein TolQ [Brucella pinnipedialis B2/94]
gi|254714561|ref|ZP_05176372.1| protein TolQ [Brucella ceti M644/93/1]
gi|254717458|ref|ZP_05179269.1| protein TolQ [Brucella ceti M13/05/1]
gi|254730903|ref|ZP_05189481.1| protein TolQ [Brucella abortus bv. 4 str. 292]
gi|256030240|ref|ZP_05443854.1| protein TolQ [Brucella pinnipedialis M292/94/1]
gi|256045310|ref|ZP_05448204.1| protein TolQ [Brucella melitensis bv. 1 str. Rev.1]
gi|256061737|ref|ZP_05451874.1| protein TolQ [Brucella neotomae 5K33]
gi|256114268|ref|ZP_05455013.1| protein TolQ [Brucella melitensis bv. 3 str. Ether]
gi|256160415|ref|ZP_05458104.1| protein TolQ [Brucella ceti M490/95/1]
gi|256255621|ref|ZP_05461157.1| protein TolQ [Brucella ceti B1/94]
gi|256258122|ref|ZP_05463658.1| protein TolQ [Brucella abortus bv. 9 str. C68]
gi|256263353|ref|ZP_05465885.1| TolQ protein [Brucella melitensis bv. 2 str. 63/9]
gi|256370109|ref|YP_003107620.1| biopolymer transport protein TolQ [Brucella microti CCM 4915]
gi|260167915|ref|ZP_05754726.1| biopolymer transport protein TolQ [Brucella sp. F5/99]
gi|260565799|ref|ZP_05836282.1| TolQ protein [Brucella melitensis bv. 1 str. 16M]
gi|260568785|ref|ZP_05839253.1| TolQ protein [Brucella suis bv. 4 str. 40]
gi|260755399|ref|ZP_05867747.1| TolQ protein [Brucella abortus bv. 6 str. 870]
gi|260758621|ref|ZP_05870969.1| TolQ protein [Brucella abortus bv. 4 str. 292]
gi|260762453|ref|ZP_05874790.1| TolQ protein [Brucella abortus bv. 2 str. 86/8/59]
gi|260884415|ref|ZP_05896029.1| TolQ protein [Brucella abortus bv. 9 str. C68]
gi|261214670|ref|ZP_05928951.1| TolQ protein [Brucella abortus bv. 3 str. Tulya]
gi|261219289|ref|ZP_05933570.1| TolQ protein [Brucella ceti M13/05/1]
gi|261222824|ref|ZP_05937105.1| TolQ protein [Brucella ceti B1/94]
gi|261315932|ref|ZP_05955129.1| biopolymer transporter TolQ [Brucella pinnipedialis M163/99/10]
gi|261316205|ref|ZP_05955402.1| TolQ protein [Brucella pinnipedialis B2/94]
gi|261322350|ref|ZP_05961547.1| TolQ protein [Brucella ceti M644/93/1]
gi|261325741|ref|ZP_05964938.1| TolQ protein [Brucella neotomae 5K33]
gi|261750855|ref|ZP_05994564.1| TolQ protein [Brucella suis bv. 5 str. 513]
gi|261754108|ref|ZP_05997817.1| TolQ protein [Brucella suis bv. 3 str. 686]
gi|261757353|ref|ZP_06001062.1| TolQ protein [Brucella sp. F5/99]
gi|265987268|ref|ZP_06099825.1| TolQ protein [Brucella pinnipedialis M292/94/1]
gi|265991735|ref|ZP_06104292.1| TolQ protein [Brucella melitensis bv. 1 str. Rev.1]
gi|265995572|ref|ZP_06108129.1| TolQ protein [Brucella melitensis bv. 3 str. Ether]
gi|265998783|ref|ZP_06111340.1| TolQ protein [Brucella ceti M490/95/1]
gi|294850951|ref|ZP_06791627.1| TolQ [Brucella sp. NVSL 07-0026]
gi|297248971|ref|ZP_06932679.1| TolQ protein [Brucella abortus bv. 5 str. B3196]
gi|13898973|gb|AAK48915.1|AF358662_2 TolQ protein [Brucella melitensis]
gi|17982232|gb|AAL51517.1| tolq protein [Brucella melitensis bv. 1 str. 16M]
gi|23348558|gb|AAN30600.1| tolQ protein [Brucella suis 1330]
gi|62196704|gb|AAX75004.1| TolQ, tolQ protein [Brucella abortus bv. 1 str. 9-941]
gi|82616589|emb|CAJ11668.1| MotA/TolQ/ExbB proton channel [Brucella melitensis biovar Abortus
2308]
gi|161336440|gb|ABX62745.1| protein TolQ [Brucella canis ATCC 23365]
gi|163676002|gb|ABY40112.1| protein TolQ [Brucella suis ATCC 23445]
gi|189020362|gb|ACD73084.1| MotA/TolQ/ExbB proton channel [Brucella abortus S19]
gi|225616114|gb|EEH13162.1| protein TolQ [Brucella ceti str. Cudo]
gi|225641520|gb|ACO01434.1| protein TolQ [Brucella melitensis ATCC 23457]
gi|237788740|gb|EEP62952.1| protein TolQ [Brucella abortus str. 2308 A]
gi|256000272|gb|ACU48671.1| biopolymer transport protein TolQ [Brucella microti CCM 4915]
gi|260151172|gb|EEW86267.1| TolQ protein [Brucella melitensis bv. 1 str. 16M]
gi|260154169|gb|EEW89251.1| TolQ protein [Brucella suis bv. 4 str. 40]
gi|260668939|gb|EEX55879.1| TolQ protein [Brucella abortus bv. 4 str. 292]
gi|260672879|gb|EEX59700.1| TolQ protein [Brucella abortus bv. 2 str. 86/8/59]
gi|260675507|gb|EEX62328.1| TolQ protein [Brucella abortus bv. 6 str. 870]
gi|260873943|gb|EEX81012.1| TolQ protein [Brucella abortus bv. 9 str. C68]
gi|260916277|gb|EEX83138.1| TolQ protein [Brucella abortus bv. 3 str. Tulya]
gi|260921408|gb|EEX88061.1| TolQ protein [Brucella ceti B1/94]
gi|260924378|gb|EEX90946.1| TolQ protein [Brucella ceti M13/05/1]
gi|261295040|gb|EEX98536.1| TolQ protein [Brucella ceti M644/93/1]
gi|261295428|gb|EEX98924.1| TolQ protein [Brucella pinnipedialis B2/94]
gi|261301721|gb|EEY05218.1| TolQ protein [Brucella neotomae 5K33]
gi|261304958|gb|EEY08455.1| biopolymer transporter TolQ [Brucella pinnipedialis M163/99/10]
gi|261737337|gb|EEY25333.1| TolQ protein [Brucella sp. F5/99]
gi|261740608|gb|EEY28534.1| TolQ protein [Brucella suis bv. 5 str. 513]
gi|261743861|gb|EEY31787.1| TolQ protein [Brucella suis bv. 3 str. 686]
gi|262553472|gb|EEZ09241.1| TolQ protein [Brucella ceti M490/95/1]
gi|262766856|gb|EEZ12474.1| TolQ protein [Brucella melitensis bv. 3 str. Ether]
gi|263002691|gb|EEZ15094.1| TolQ protein [Brucella melitensis bv. 1 str. Rev.1]
gi|263093352|gb|EEZ17421.1| TolQ protein [Brucella melitensis bv. 2 str. 63/9]
gi|264659465|gb|EEZ29726.1| TolQ protein [Brucella pinnipedialis M292/94/1]
gi|294821594|gb|EFG38590.1| TolQ [Brucella sp. NVSL 07-0026]
gi|297174104|gb|EFH33461.1| TolQ protein [Brucella abortus bv. 5 str. B3196]
gi|326409713|gb|ADZ66778.1| MotA/TolQ/ExbB proton channel [Brucella melitensis M28]
gi|326539420|gb|ADZ87635.1| protein TolQ [Brucella melitensis M5-90]
Length = 236
Score = 261 bits (668), Expect = 4e-68, Method: Composition-based stats.
Identities = 106/233 (45%), Positives = 155/233 (66%), Gaps = 3/233 (1%)
Query: 1 MNNYGLAIM--DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFRE 58
M N LA D++++ LFMQ VK ++ L SI +W++I+ K++ + RR
Sbjct: 1 MENVALAAPAADVTLWGLFMQANWVVKLVMLGLLFASIWTWAIIVDKTIAYGRARRAIDR 60
Query: 59 FEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMD 118
FEQ FWSGQSLE + ++L G+A+IFM+AM EWKKS +KGARSPIG+Q RID+ MD
Sbjct: 61 FEQSFWSGQSLEELYRNLSERRTSGMASIFMAAMREWKKSFEKGARSPIGLQMRIDKAMD 120
Query: 119 VAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIE 177
VA+ARE ++ +L FL ++ SA +G+ G V+G+M FQ+IA + ++ V PGI E
Sbjct: 121 VALARESGKLESRLGFLATIGSAAPFIGLFGTVVGIMTSFQAIAASKNTSLAVVAPGIAE 180
Query: 178 SLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
+L++ +GL +IP+ IAYNK D+ K ++EGFA+EFSAILSRQ + ++
Sbjct: 181 ALLATAIGLLAAIPAVIAYNKLSADAGKIGGRLEGFADEFSAILSRQIDEKLT 233
>gi|260467062|ref|ZP_05813242.1| protein TolQ [Mesorhizobium opportunistum WSM2075]
gi|259029171|gb|EEW30467.1| protein TolQ [Mesorhizobium opportunistum WSM2075]
Length = 236
Score = 261 bits (667), Expect = 7e-68, Method: Composition-based stats.
Identities = 104/233 (44%), Positives = 157/233 (67%), Gaps = 3/233 (1%)
Query: 1 MNNYGLAIM--DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFRE 58
M N LA +SI+ALFMQ VK ++ L S+ +W++II K V + +R
Sbjct: 1 MENIALAEPGAQLSIWALFMQASWVVKLVMIGLLCASVWTWAIIIDKLVAYGRMRLALNR 60
Query: 59 FEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMD 118
FEQ+FWSGQSLE + ++L + G+ AIF++AM EWKKS +KGA++P+G+Q RID+ MD
Sbjct: 61 FEQVFWSGQSLEELYRTLADRKTSGMGAIFVAAMREWKKSFEKGAKTPLGLQTRIDKAMD 120
Query: 119 VAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIE 177
+A+ RE+E++ +L FL + SA +G+ G V+G+M FQ+IA + ++ V PGI E
Sbjct: 121 LALTREMEKLEGRLGFLATTGSAAPFIGLFGTVIGIMTSFQAIADSKNTSLAVVAPGIAE 180
Query: 178 SLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
+L++ +GL +IP+ IAYNK D+ K A++MEGF++EFSAILSRQ + ++
Sbjct: 181 ALLATAIGLLAAIPAVIAYNKLSSDASKIAVRMEGFSDEFSAILSRQIDEKVA 233
>gi|15966495|ref|NP_386848.1| putative transport transmembrane protein [Sinorhizobium meliloti
1021]
gi|307300468|ref|ZP_07580248.1| protein TolQ [Sinorhizobium meliloti BL225C]
gi|307318333|ref|ZP_07597768.1| protein TolQ [Sinorhizobium meliloti AK83]
gi|15075766|emb|CAC47321.1| Putative transport transmembrane protein [Sinorhizobium meliloti
1021]
gi|306896015|gb|EFN26766.1| protein TolQ [Sinorhizobium meliloti AK83]
gi|306904634|gb|EFN35218.1| protein TolQ [Sinorhizobium meliloti BL225C]
Length = 239
Score = 260 bits (666), Expect = 9e-68, Method: Composition-based stats.
Identities = 111/231 (48%), Positives = 160/231 (69%), Gaps = 2/231 (0%)
Query: 1 MNNYGLAIM-DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREF 59
M GLA D+++++LFMQ GL VK ++ L S+ +W++++ KS+N+ +RRQ F
Sbjct: 1 MEQVGLAATSDVTLWSLFMQAGLVVKLVMLGLIAASVWTWAIVVDKSLNYGRVRRQLDNF 60
Query: 60 EQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDV 119
EQ+FWSGQSLE + ++L + G+ AIF+SAM EWKKS ++GAR+PIG+Q RIDR MDV
Sbjct: 61 EQVFWSGQSLEELYRTLSDRQTSGMGAIFVSAMREWKKSFERGARAPIGLQMRIDRAMDV 120
Query: 120 AIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIES 178
+ARE E + +L L ++ SA +G+ G V+G+M FQ+IAG S N+ V PGI E+
Sbjct: 121 TLARESEALEARLGSLATIGSAAPFIGLFGTVVGIMTSFQAIAGSKSTNLAVVAPGIAEA 180
Query: 179 LISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNI 229
L++ +GL +IP+ IAYNKF D+ K +ME FA+EFSAILSRQ + +
Sbjct: 181 LLATAIGLLAAIPAVIAYNKFTADAGKLTARMEAFADEFSAILSRQIDEKL 231
>gi|90418973|ref|ZP_01226884.1| TolQ biopolymer transport protein, tolerance to group A tolicins
[Aurantimonas manganoxydans SI85-9A1]
gi|90337053|gb|EAS50758.1| TolQ biopolymer transport protein, tolerance to group A tolicins
[Aurantimonas manganoxydans SI85-9A1]
Length = 238
Score = 260 bits (665), Expect = 1e-67, Method: Composition-based stats.
Identities = 104/225 (46%), Positives = 151/225 (67%), Gaps = 1/225 (0%)
Query: 7 AIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG 66
A +S++ LF Q G VK ++ L S+ +W++II KS+ + RRQ +FE FWSG
Sbjct: 12 AAGSVSLWDLFWQAGFIVKLVMIGLMAASVWTWAIIIDKSMRYGRFRRQLNKFESNFWSG 71
Query: 67 QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
QSLE + +L G+ A+F++AM EWKKS +KGARSP+G+Q RID+ MDV +ARE++
Sbjct: 72 QSLEDLYHNLSERKTSGMGALFVAAMREWKKSFEKGARSPLGLQTRIDKAMDVTLAREMD 131
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLG 185
E+ +L FL ++ SA VG+ G V+G+M FQ+IAG ++ V PGI E+L++ +G
Sbjct: 132 ELESRLGFLATIGSAAPFVGLFGTVIGIMTSFQAIAGSQQTSLAVVAPGIAEALLATAIG 191
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
L +IP+ IAYNK D+ K M++E FA+EFSAILSRQ + +S
Sbjct: 192 LVAAIPAVIAYNKLSADAGKLGMRLESFADEFSAILSRQIDEKLS 236
>gi|319781024|ref|YP_004140500.1| protein TolQ [Mesorhizobium ciceri biovar biserrulae WSM1271]
gi|317166912|gb|ADV10450.1| protein TolQ [Mesorhizobium ciceri biovar biserrulae WSM1271]
Length = 236
Score = 259 bits (663), Expect = 2e-67, Method: Composition-based stats.
Identities = 101/233 (43%), Positives = 158/233 (67%), Gaps = 3/233 (1%)
Query: 1 MNNYGLAIM--DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFRE 58
M N LA +S+++LF+ VK ++ L S+ +W++I+ K V++ +R
Sbjct: 1 MENIALADPGAQLSVWSLFVSASWVVKLVMIGLLCASVWTWAIIVDKLVSYARMRLALNR 60
Query: 59 FEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMD 118
FEQ+FWSGQSLE + ++L + G+ AIF++AM EWKKS +KGA+SP+G+Q RID+ MD
Sbjct: 61 FEQVFWSGQSLEELYRTLADRKTTGMGAIFVAAMREWKKSFEKGAKSPLGLQTRIDKAMD 120
Query: 119 VAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIE 177
+A+ RE+E++ +L FL + SA +G+ G V+G+M FQ+IAG + ++ V PGI E
Sbjct: 121 LALTREMEKLEGRLGFLATTGSAAPFIGLFGTVIGIMTSFQAIAGSKNTSLAVVAPGIAE 180
Query: 178 SLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
+L++ +GL +IP+ IAYNK D+ K A++MEGF++EFSAILSRQ + ++
Sbjct: 181 ALLATAIGLLAAIPAVIAYNKLSSDASKIAVRMEGFSDEFSAILSRQIDEKVA 233
>gi|150397828|ref|YP_001328295.1| Tol-Pal system TolQ [Sinorhizobium medicae WSM419]
gi|150029343|gb|ABR61460.1| Tol-Pal system TolQ [Sinorhizobium medicae WSM419]
Length = 239
Score = 259 bits (663), Expect = 2e-67, Method: Composition-based stats.
Identities = 111/231 (48%), Positives = 161/231 (69%), Gaps = 2/231 (0%)
Query: 1 MNNYGLAIM-DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREF 59
M GLA D+++++LFMQ GL VK ++ L S+ +W++++ KS+N+ +RRQ F
Sbjct: 1 MEQVGLAATSDVTLWSLFMQAGLVVKLVMLGLIAASVWTWAIVVDKSLNYGRVRRQLDSF 60
Query: 60 EQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDV 119
EQ+FWSGQSLE + ++L + G+ AIF+SAM EWKKS ++GAR+PIG+Q RIDR MDV
Sbjct: 61 EQVFWSGQSLEELYRTLSDRQTSGMGAIFVSAMREWKKSFERGARAPIGLQMRIDRAMDV 120
Query: 120 AIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIES 178
+ARE E + +L L ++ SA +G+ G V+G+M FQ+IAG S N+ V PGI E+
Sbjct: 121 TLARESEALEARLGSLATIGSAAPFIGLFGTVVGIMTSFQAIAGSKSTNLAVVAPGIAEA 180
Query: 179 LISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNI 229
L++ +GL +IP+ IAYNKF D+ K + +ME FA+EFSAILSRQ + +
Sbjct: 181 LLATAIGLLAAIPAVIAYNKFTADAGKLSARMEAFADEFSAILSRQIDEKL 231
>gi|158422145|ref|YP_001523437.1| TolQ protein precursor [Azorhizobium caulinodans ORS 571]
gi|158329034|dbj|BAF86519.1| TolQ protein precursor [Azorhizobium caulinodans ORS 571]
Length = 281
Score = 257 bits (657), Expect = 1e-66, Method: Composition-based stats.
Identities = 97/220 (44%), Positives = 146/220 (66%), Gaps = 1/220 (0%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
+IS+ LF+Q VK ++ L SI W++II K++ F R++ FEQ+FWSGQSL
Sbjct: 61 NISLIGLFLQAHFVVKLVMLGLVAASIWVWAIIIDKTLLFTRTRKEMDRFEQVFWSGQSL 120
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
E + +SL N +AAIF++AM EWK++ + GA+S G+ RI+++MDV I+RE+E +
Sbjct: 121 EELYRSLAGRPNQAMAAIFVAAMREWKRTYEGGAKSLTGLNQRIEKVMDVTISREVEALE 180
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCV 188
KL L ++ SAG +G+ G V G+M FQ+IA + N+ V PGI E+L + +GL
Sbjct: 181 SKLLVLATVGSAGPFIGLFGTVWGIMTSFQAIAASKNTNLAVVAPGIAEALFATAMGLIA 240
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
+IP++I YNKF+ + + A ++EGFA+EFSAILSRQ +
Sbjct: 241 AIPATIFYNKFVHQASRQAQRLEGFADEFSAILSRQIDER 280
>gi|163758793|ref|ZP_02165880.1| putative transport transmembrane protein [Hoeflea phototrophica
DFL-43]
gi|162284083|gb|EDQ34367.1| putative transport transmembrane protein [Hoeflea phototrophica
DFL-43]
Length = 238
Score = 257 bits (656), Expect = 1e-66, Method: Composition-based stats.
Identities = 109/232 (46%), Positives = 159/232 (68%), Gaps = 2/232 (0%)
Query: 1 MNNYGLAIM-DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREF 59
M GLA ++++++LFMQ G VK ++ L SI +W+++ K V++ R Q +F
Sbjct: 1 MEQVGLAATSEVTLWSLFMQAGFVVKLVMLGLVGASIWTWAIVADKWVSYRKFRGQLDQF 60
Query: 60 EQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDV 119
EQ+FWSGQSLE + ++L + G++AIF++AM EWKKS ++GA+SPIG+Q RID+ MDV
Sbjct: 61 EQIFWSGQSLEELYRTLSDRKTSGMSAIFVAAMREWKKSFERGAKSPIGLQMRIDKAMDV 120
Query: 120 AIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIES 178
+ARE E + KL L S+ SA +G+ G V+G+M FQ+IAG S N+ V PGI E+
Sbjct: 121 TLAREAEHLESKLGSLASIGSAAPFIGLFGTVVGIMTSFQAIAGSKSTNLAVVAPGIAEA 180
Query: 179 LISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
L++ +GL +IP+ IAYNKF D+ K + +MEGFA+EFS ILSRQ + +S
Sbjct: 181 LLATAIGLLAAIPAVIAYNKFSSDAGKLSGRMEGFADEFSGILSRQIDERMS 232
>gi|298292997|ref|YP_003694936.1| protein TolQ [Starkeya novella DSM 506]
gi|296929508|gb|ADH90317.1| protein TolQ [Starkeya novella DSM 506]
Length = 280
Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats.
Identities = 100/223 (44%), Positives = 147/223 (65%), Gaps = 1/223 (0%)
Query: 7 AIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG 66
D+S+ LF+Q L VK ++ L + SI W++II K++ F ++RQ FE FWSG
Sbjct: 57 GSSDLSLIGLFLQAHLVVKIVMLGLVLASIWVWAIIIDKTILFQRMKRQMDRFESTFWSG 116
Query: 67 QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
QSLE + +SL + N +AAIF++AM EWK+S + GARS G+ R+D++MDV IARE+E
Sbjct: 117 QSLEELYRSLSSRPNHAMAAIFVAAMREWKRSYEGGARSLAGLTQRLDKVMDVTIAREVE 176
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLG 185
+ +L L ++ SAG +G+ G V G+M FQSIA + ++ V PGI E+L + +G
Sbjct: 177 RLESRLLVLATVGSAGPFIGLFGTVWGIMTSFQSIAASKNTSLAVVAPGIAEALFATAIG 236
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
L +IP++I YNKF+ + A ++EGFA+EFSAILSRQ +
Sbjct: 237 LIAAIPATIFYNKFVSQVNRQAARLEGFADEFSAILSRQIDER 279
>gi|328542541|ref|YP_004302650.1| Protein transporter [polymorphum gilvum SL003B-26A1]
gi|326412287|gb|ADZ69350.1| Protein transporter protein [Polymorphum gilvum SL003B-26A1]
Length = 235
Score = 255 bits (653), Expect = 3e-66, Method: Composition-based stats.
Identities = 101/221 (45%), Positives = 140/221 (63%), Gaps = 1/221 (0%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S FALF+Q + VK ++ L S+ W++I K V F +RQ FE +FWSGQSL
Sbjct: 15 DLSFFALFLQAHIVVKLVMIGLIGASVWCWAIIFDKVVLFARTKRQMTRFETVFWSGQSL 74
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
E + K+L N N +AA+F++AM EWK+S + + +Q RIDR+MDV I RE+E +
Sbjct: 75 EELYKTLSNRANHSMAALFVAAMREWKRSHEGARPALASLQQRIDRVMDVTIQREIERLE 134
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCV 188
+L L ++ SA +G+ G V G+M FQ+IA S N+ V PGI E+L + LGL
Sbjct: 135 ARLLILATVGSAAPFIGLFGTVWGIMTSFQAIAASESTNLAVVAPGIAEALFATALGLLA 194
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNI 229
+IP+ IAYNK D K + +MEGFA+EFSAILSRQ + I
Sbjct: 195 AIPAVIAYNKLSTDVGKLSARMEGFADEFSAILSRQIDERI 235
>gi|312115994|ref|YP_004013590.1| protein TolQ [Rhodomicrobium vannielii ATCC 17100]
gi|311221123|gb|ADP72491.1| protein TolQ [Rhodomicrobium vannielii ATCC 17100]
Length = 226
Score = 255 bits (651), Expect = 5e-66, Method: Composition-based stats.
Identities = 87/218 (39%), Positives = 138/218 (63%), Gaps = 1/218 (0%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D S LF+Q VK ++ L + S+ WS++I+K++ F ++Q EFE++FWSGQSL
Sbjct: 6 DFSFLGLFLQAHPVVKFVMIGLILASVWCWSIVIEKTIAFRRAKKQTEEFERVFWSGQSL 65
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+ + ++ +AA+F +AM EW++S D A+ G+Q RI+R+M+V I RE+E +
Sbjct: 66 DELYLAMPQKPTSAMAALFQAAMREWRRSIDGTAKPLPGVQMRIERVMEVTITREMERLE 125
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCV 188
+L FL ++ + +G+ G V G+M FQ IA + N+ V PGI E+L + LGL
Sbjct: 126 ARLLFLATVGAVAPFIGLFGTVWGIMTAFQGIAASKNTNLAVVAPGIAEALFATALGLLA 185
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ I YN F + + + A ++EGFA+EFSAI+SRQ +
Sbjct: 186 AIPAVIFYNAFQQSASRLAQRLEGFADEFSAIVSRQLD 223
>gi|260547184|ref|ZP_05822922.1| TolQ protein [Brucella abortus NCTC 8038]
gi|260095549|gb|EEW79427.1| TolQ protein [Brucella abortus NCTC 8038]
Length = 228
Score = 254 bits (650), Expect = 5e-66, Method: Composition-based stats.
Identities = 106/228 (46%), Positives = 152/228 (66%), Gaps = 3/228 (1%)
Query: 1 MNNYGLAIM--DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFRE 58
M N LA D++++ LFMQ VK ++ L SI +W++I+ K++ + RR
Sbjct: 1 MENVALAAPAADVTLWGLFMQANWVVKLVMLGLLFASIWTWAIIVDKTIAYGRARRAIDR 60
Query: 59 FEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMD 118
FEQ FWSGQSLE + ++L G+A+IFM+AM EWKKS +KGARSPIG+Q RID+ MD
Sbjct: 61 FEQSFWSGQSLEELYRNLSERRTSGMASIFMAAMREWKKSFEKGARSPIGLQMRIDKAMD 120
Query: 119 VAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIE 177
VA+ARE ++ +L FL ++ SA +G+ G V+G+M FQ+IA + ++ V PGI E
Sbjct: 121 VALARESGKLESRLGFLATIGSAAPFIGLFGTVVGIMTSFQAIAASKNTSLAVVAPGIAE 180
Query: 178 SLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+L++ +GL +IP+ IAYNK D+ K ++EGFA+EFSAILSRQ
Sbjct: 181 ALLATAIGLLAAIPAVIAYNKLSADAGKIGGRLEGFADEFSAILSRQI 228
>gi|254502321|ref|ZP_05114472.1| protein TolQ [Labrenzia alexandrii DFL-11]
gi|222438392|gb|EEE45071.1| protein TolQ [Labrenzia alexandrii DFL-11]
Length = 235
Score = 253 bits (648), Expect = 1e-65, Method: Composition-based stats.
Identities = 95/221 (42%), Positives = 138/221 (62%), Gaps = 1/221 (0%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S +ALF Q + V+ ++ L S+ W++I+ K + F +RQ FE +FWSGQSL
Sbjct: 15 DLSFYALFWQAHIVVQVVMLGLLAASVWCWAIIVDKIMIFGKTKRQMNRFETVFWSGQSL 74
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
E + +L N N +AA+F++AM EWK+S + + +Q RIDR+MDV I RE E +
Sbjct: 75 EELYGTLHNRVNHSMAALFVAAMREWKRSHEGARPAIGSLQQRIDRVMDVTIQREQERLE 134
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCV 188
+L L ++ S+ +G+ G V G+M FQ+IA S N+ V PGI E+L + LGL
Sbjct: 135 NRLLILATVGSSAPFIGLFGTVWGIMTAFQAIAASESTNLAVVAPGIAEALFATALGLLA 194
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNI 229
+IP+ IAYNKF D + +MEGFA+EFSAILSRQ + +
Sbjct: 195 AIPAVIAYNKFSSDVGRAVARMEGFADEFSAILSRQIDERV 235
>gi|170741559|ref|YP_001770214.1| protein TolQ [Methylobacterium sp. 4-46]
gi|168195833|gb|ACA17780.1| protein TolQ [Methylobacterium sp. 4-46]
Length = 238
Score = 253 bits (646), Expect = 2e-65, Method: Composition-based stats.
Identities = 92/235 (39%), Positives = 142/235 (60%), Gaps = 5/235 (2%)
Query: 1 MNNY----GLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQF 56
MN L + +I++F LF Q + VK ++ L S+ W++I+ K++ F + +
Sbjct: 1 MNPADAVQALPVHEITLFGLFWQAHVVVKVVMLGLLGASVWCWAIIVDKTLLFRRAKAEM 60
Query: 57 REFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRM 116
FE+ FWSG+SLE + +S + GLAA+F++AM EWK+S + RS + RID++
Sbjct: 61 DAFEESFWSGRSLEELYRSFHDKAPTGLAAVFVAAMREWKRSFEGSGRSIQSLSQRIDKV 120
Query: 117 MDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGI 175
+DV I RE+E +L FL S+ SAG +G+ G V G+M F SIA + ++ V PGI
Sbjct: 121 LDVTIQREVERFESRLLFLASIGSAGPYIGLFGTVWGIMTAFTSIAASKNTSLAVVAPGI 180
Query: 176 IESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
E+L + +GL +IP+ +AYNK K ++EGFA+EFSAILSRQ + ++
Sbjct: 181 AEALFATAIGLFAAIPAVLAYNKLQASVGKLQGRLEGFADEFSAILSRQIDERLA 235
>gi|86748932|ref|YP_485428.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris HaA2]
gi|86571960|gb|ABD06517.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris HaA2]
Length = 237
Score = 252 bits (644), Expect = 3e-65, Method: Composition-based stats.
Identities = 91/236 (38%), Positives = 141/236 (59%), Gaps = 8/236 (3%)
Query: 1 MNNY-------GLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLR 53
MN L D+S+ LF Q VK ++ L S+ W++ I K + + +
Sbjct: 1 MNPADVTQSAMPLVSADMSLIGLFWQAHWIVKSVMLGLIGCSVWVWAIAIDKLILYSRTK 60
Query: 54 RQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRI 113
R FEQ FWSG+S++ + ++L +AA F++AM EWK+S + +RS G+Q RI
Sbjct: 61 RAMDRFEQAFWSGESIDDLYRTLSAKPTHSMAACFVAAMREWKRSFESHSRSFAGLQMRI 120
Query: 114 DRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSI 172
+++M+V+IARE+E + +L L ++ SAG VG+ G V G+M FQSIA + ++ V
Sbjct: 121 EKVMNVSIAREVERLERRLLVLATVGSAGPFVGLFGTVWGIMSSFQSIAASKNTSLAVVA 180
Query: 173 PGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
PGI E+L + +GL +IP++I YNKF + + ++EGFA+EFSAILSRQ +
Sbjct: 181 PGIAEALFATAIGLIAAIPATIFYNKFTSEVNRQTQRLEGFADEFSAILSRQIDER 236
>gi|148258092|ref|YP_001242677.1| TolQ protein [Bradyrhizobium sp. BTAi1]
gi|146410265|gb|ABQ38771.1| Cell division and transport-associated protein TolQ [Bradyrhizobium
sp. BTAi1]
Length = 237
Score = 251 bits (641), Expect = 6e-65, Method: Composition-based stats.
Identities = 96/236 (40%), Positives = 143/236 (60%), Gaps = 8/236 (3%)
Query: 1 MNNYGLAIM-------DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLR 53
MN +A D+S+ ALF Q VK ++ L S+ W++ I K + R
Sbjct: 1 MNPADVAPAALPVVSGDVSLIALFWQAHWVVKGVMLGLITCSVWVWAIAIDKLFLYSRTR 60
Query: 54 RQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRI 113
R FEQ FWSG+S+E + ++L +AA F++AM EWK+S + ARS G+Q RI
Sbjct: 61 RSMDRFEQAFWSGESIEELYRALSAKPTQSMAACFVAAMREWKRSFEGHARSFAGLQMRI 120
Query: 114 DRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSI 172
+++M+V+IARE+E + +L L ++ SAG VG+ G V G+M FQSIA + ++ V
Sbjct: 121 EKVMNVSIAREVERLERRLLVLATVGSAGPFVGLFGTVWGIMSSFQSIAASKNTSLAVVA 180
Query: 173 PGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
PGI E+L + +GL +IP++I YNKF + + A ++EGFA+EFSAILSRQ +
Sbjct: 181 PGIAEALFATAIGLIAAIPATIFYNKFTSEVNRQAQRLEGFADEFSAILSRQIDER 236
>gi|254473148|ref|ZP_05086546.1| protein TolQ [Pseudovibrio sp. JE062]
gi|211957869|gb|EEA93071.1| protein TolQ [Pseudovibrio sp. JE062]
Length = 261
Score = 251 bits (641), Expect = 7e-65, Method: Composition-based stats.
Identities = 99/219 (45%), Positives = 142/219 (64%), Gaps = 1/219 (0%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+S +LFM+ + VK ++ L S+ SW++I K V + RRQ FE +FWSGQSLE
Sbjct: 42 LSYISLFMEADIVVKIVMIGLIAASVWSWAIIFDKVVLYGRSRRQMNRFENVFWSGQSLE 101
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
+ KSL + N G++A+F++AM EWK+S + + +Q RIDR+MD+ I+RE+E + +
Sbjct: 102 ELYKSLSSRANNGMSALFVAAMREWKRSHEGDKPAIASLQQRIDRVMDLTISREVERLEK 161
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVS 189
+L FL ++ SA VG+ G V G+M F SIA + N+ V PGI E+L + LGL +
Sbjct: 162 RLLFLATIGSAAPFVGLFGTVWGIMNAFTSIAASKNTNLAVVAPGIAEALFATGLGLIAA 221
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
IP+ IAYNK DS K A +MEGFA+EFSAILSR+ +
Sbjct: 222 IPAVIAYNKLQSDSGKLAARMEGFADEFSAILSRRIDER 260
>gi|240851222|ref|YP_002972625.1| inner membrane TolQ protein [Bartonella grahamii as4aup]
gi|240268345|gb|ACS51933.1| inner membrane TolQ protein [Bartonella grahamii as4aup]
Length = 237
Score = 251 bits (641), Expect = 7e-65, Method: Composition-based stats.
Identities = 90/221 (40%), Positives = 142/221 (64%), Gaps = 1/221 (0%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
I + LFMQ VK ++ L + SI SW++I K + +RR+ ++FE+ FWSG++LE
Sbjct: 12 IGMLHLFMQASWIVKGVMIGLLLASIWSWAIIFDKIFTYRRIRREIKQFERTFWSGKALE 71
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
+ S K+ H ++A+FM+AM EWKKS +KG + +Q RID+ MD+ + RE E+I
Sbjct: 72 DLYASCKSQHTNSISAVFMAAMIEWKKSLEKGTHTSKSLQSRIDKAMDLTLGRESEKIES 131
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVS 189
KLSFL ++ SAG +G+ G V+G+M F SI+ + ++ + PGI E+L++ +GL +
Sbjct: 132 KLSFLATLGSAGPFIGLFGTVIGIMESFLSISASQNTSLAIVAPGIAEALLATAIGLFAA 191
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
IP+ IAYNK +S + Q+E FA+EFS I+SR+ + +
Sbjct: 192 IPAVIAYNKLTHESARIIAQIENFADEFSTIVSRRIDETRT 232
>gi|39934192|ref|NP_946468.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris CGA009]
gi|192289718|ref|YP_001990323.1| protein TolQ [Rhodopseudomonas palustris TIE-1]
gi|39648040|emb|CAE26560.1| TolQ protein, inner membrane protein, tolerance to group A colicins
[Rhodopseudomonas palustris CGA009]
gi|192283467|gb|ACE99847.1| protein TolQ [Rhodopseudomonas palustris TIE-1]
Length = 236
Score = 250 bits (640), Expect = 9e-65, Method: Composition-based stats.
Identities = 91/235 (38%), Positives = 141/235 (60%), Gaps = 7/235 (2%)
Query: 1 MNNYGLA------IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRR 54
MN + D+S+ +LF VK I+ L S+ W++ I K + F +R
Sbjct: 1 MNPADVTQLAPAVSTDVSLLSLFWHAHWVVKSIMLGLLGCSVWVWAIAIDKLLLFSRTKR 60
Query: 55 QFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRID 114
FEQ FWSG+S++ + ++L +AA F++AM EWK+S + +RS G+Q RI+
Sbjct: 61 AMDRFEQAFWSGESIDELYRALSAKPTHSMAACFVAAMREWKRSFESHSRSFAGLQMRIE 120
Query: 115 RMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIP 173
++M+V+IARE+E + +L L ++ SAG VG+ G V G+M FQSIA + ++ V P
Sbjct: 121 KVMNVSIAREVERLERRLLVLATVGSAGPFVGLFGTVWGIMSSFQSIAASKNTSLAVVAP 180
Query: 174 GIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
GI E+L + +GL +IP++I YNKF + + ++EGFA+EFSAILSRQ +
Sbjct: 181 GIAEALFATAIGLIAAIPATIFYNKFTSEVNRQTQRLEGFADEFSAILSRQIDER 235
>gi|316932661|ref|YP_004107643.1| protein TolQ [Rhodopseudomonas palustris DX-1]
gi|315600375|gb|ADU42910.1| protein TolQ [Rhodopseudomonas palustris DX-1]
Length = 236
Score = 250 bits (640), Expect = 9e-65, Method: Composition-based stats.
Identities = 92/235 (39%), Positives = 141/235 (60%), Gaps = 7/235 (2%)
Query: 1 MNNYGLA------IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRR 54
MN + D+S+ +LF VK I+ L S+ W++ I K + F RR
Sbjct: 1 MNPADVTQLAPAVSTDVSLLSLFWHAHWVVKSIMLGLLGCSVWVWAIAIDKLLLFSRTRR 60
Query: 55 QFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRID 114
FEQ FWSG+S++ + ++L +AA F++AM EWK+S + +RS G+Q RI+
Sbjct: 61 AMDRFEQAFWSGESIDELYRALSAKPTHSMAACFVAAMREWKRSFESHSRSFAGLQMRIE 120
Query: 115 RMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIP 173
++M+V+IARE+E + +L L ++ SAG VG+ G V G+M FQSIA + ++ V P
Sbjct: 121 KVMNVSIAREVERLERRLLVLATVGSAGPFVGLFGTVWGIMSSFQSIAASKNTSLAVVAP 180
Query: 174 GIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
GI E+L + +GL +IP++I YNKF + + ++EGFA+EFSAILSRQ +
Sbjct: 181 GIAEALFATAIGLIAAIPATIFYNKFTSEVNRQTQRLEGFADEFSAILSRQIDER 235
>gi|114765734|ref|ZP_01444832.1| proton transporter TolQ [Pelagibaca bermudensis HTCC2601]
gi|114541951|gb|EAU44986.1| proton transporter TolQ [Roseovarius sp. HTCC2601]
Length = 231
Score = 250 bits (640), Expect = 9e-65, Method: Composition-based stats.
Identities = 79/231 (34%), Positives = 127/231 (54%), Gaps = 4/231 (1%)
Query: 1 MNNYGLAI---MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFR 57
M+ L + +D S++ LF + L VK ++ +L + S+ W++I++K V++ RR+
Sbjct: 1 MDPQTLQLAQEIDFSMWGLFARATLTVKLVMLMLVLASVWGWAIIVEKIVSYRAARREAA 60
Query: 58 EFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMM 117
+F++ FWSG+ L+ + + +F + M+EW++S G RIDR M
Sbjct: 61 KFDRAFWSGEPLDELYDQIGPEPKGRAQRVFAAGMTEWRRSHRDDGGLIAGAHARIDRSM 120
Query: 118 DVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGII 176
DVAI +E E++ L L ++ S VG+ G V G+M F IA ++V + PGI
Sbjct: 121 DVAIQKESEDLQRGLPVLATVGSTAPFVGLFGTVWGIMHAFIEIAAQQDTSLVVVAPGIA 180
Query: 177 ESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEG 227
E+L + LGL +IP+ I YNK D+ + E FA+EFS ILSRQ +
Sbjct: 181 EALFATALGLVAAIPAVIFYNKLSADADRIISGYEAFADEFSTILSRQLDA 231
>gi|154246988|ref|YP_001417946.1| Tol-Pal system TolQ [Xanthobacter autotrophicus Py2]
gi|154161073|gb|ABS68289.1| Tol-Pal system TolQ [Xanthobacter autotrophicus Py2]
Length = 274
Score = 250 bits (639), Expect = 1e-64, Method: Composition-based stats.
Identities = 98/227 (43%), Positives = 144/227 (63%), Gaps = 1/227 (0%)
Query: 3 NYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQL 62
DIS LF+Q VK ++ L SI W++II K + F +R+ FEQ+
Sbjct: 47 PLAAPSADISFLGLFLQAHFVVKLVMIGLITSSIWVWAIIIDKWMLFSRNKREMDRFEQV 106
Query: 63 FWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIA 122
FWSGQSLE + ++L N G+AAIF++AM EWK++ + ARS G+ R+D++M+V IA
Sbjct: 107 FWSGQSLEDLYRTLAGRSNQGMAAIFVAAMREWKRTYEGSARSFAGLNQRLDKVMNVTIA 166
Query: 123 RELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLIS 181
RE+E + +L L ++ SAG +G+ G V G+M FQSIA + ++ V PGI E+L +
Sbjct: 167 REVERLESRLLVLATVGSAGPFIGLFGTVWGIMTSFQSIAASKNTSLAVVAPGIAEALFA 226
Query: 182 ILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
+GL +IP++I YNKFI + + A ++EGFA+EFSAILSRQ +
Sbjct: 227 TAMGLIAAIPATIFYNKFISQTGRQAQRLEGFADEFSAILSRQIDER 273
>gi|220924304|ref|YP_002499606.1| protein TolQ [Methylobacterium nodulans ORS 2060]
gi|219948911|gb|ACL59303.1| protein TolQ [Methylobacterium nodulans ORS 2060]
Length = 238
Score = 250 bits (638), Expect = 2e-64, Method: Composition-based stats.
Identities = 92/235 (39%), Positives = 141/235 (60%), Gaps = 5/235 (2%)
Query: 1 MNNY----GLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQF 56
MN L + +I++F LF Q VK ++ L S+ W++I+ K++ F R +
Sbjct: 1 MNPADAVQALPVHEITLFGLFWQAHFVVKVVMLGLLGASVWCWAIIVDKTLLFRRTRAEM 60
Query: 57 REFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRM 116
FE+ FWSG+SLE + +S + GL A+F++AM EWK+S + RS + RID++
Sbjct: 61 DAFEESFWSGRSLEELYRSFNDKAPTGLGAVFVAAMREWKRSFEGSGRSIHSLGQRIDKV 120
Query: 117 MDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGI 175
+DV I RE+E + +L FL S+ SAG +G+ G V G+M F SIA + ++ V PGI
Sbjct: 121 LDVTIQREVERLESRLLFLASIGSAGPYIGLFGTVWGIMTAFTSIAASKNTSLAVVAPGI 180
Query: 176 IESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
E+L + +GL +IP+ +AYNK K ++EGFA+EFSAILSRQ + ++
Sbjct: 181 AEALFATAIGLFAAIPAVLAYNKLQASVAKAQGRLEGFADEFSAILSRQIDERLA 235
>gi|119383435|ref|YP_914491.1| MotA/TolQ/ExbB proton channel [Paracoccus denitrificans PD1222]
gi|119373202|gb|ABL68795.1| Cell division and transport-associated protein TolQ [Paracoccus
denitrificans PD1222]
Length = 231
Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats.
Identities = 79/220 (35%), Positives = 125/220 (56%), Gaps = 1/220 (0%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
+D S+ ALF + L V+ ++ +L + S +W++IIQK ++F RR+ F++ FWSGQ
Sbjct: 10 PVDFSLIALFARASLTVQIVMVILILASFWAWAIIIQKFISFNAARREADRFDRAFWSGQ 69
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
L+ + + + IF + M+EW++S G+ RIDR M+V I RE +
Sbjct: 70 PLDDLYDRIGETPSGPAERIFSAGMAEWRRSHRDDGNLIAGVTARIDRAMNVTINRENDR 129
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
+T L FL ++ S +G+ G V G+ F+ IA + ++ V PGI E+L++ LGL
Sbjct: 130 LTRGLPFLATVGSTAPFIGLFGTVWGIKTAFEEIAISQNTSLAVVAPGIAEALVATALGL 189
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ I YNK D+ + E FA+EFS ILSRQ +
Sbjct: 190 LAAIPAVIFYNKLSSDADRITGGYETFADEFSTILSRQLD 229
>gi|115526698|ref|YP_783609.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris BisA53]
gi|115520645|gb|ABJ08629.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris BisA53]
Length = 227
Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats.
Identities = 94/224 (41%), Positives = 141/224 (62%), Gaps = 1/224 (0%)
Query: 6 LAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS 65
L D+S+ ALF Q VK ++ L S+ W++ I K + + +R FEQ FWS
Sbjct: 3 LVSTDVSLIALFWQAHWVVKAVMLGLLACSVWVWAIAIDKILLYSRTKRAMDRFEQAFWS 62
Query: 66 GQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
G+S++ + ++L +AA F++AM EWK+S D ARS G+Q RID++M+V+IARE+
Sbjct: 63 GESIDELYRALAAKPTQSMAACFVAAMREWKRSFDSQARSVAGLQMRIDKVMNVSIAREI 122
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILL 184
E + +L L ++ SAG VG+ G V G+M FQSIA + ++ V PGI E+L + +
Sbjct: 123 ERLERRLLVLATVGSAGPFVGLFGTVWGIMSSFQSIAASKNTSLAVVAPGIAEALFATAI 182
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
GL +IP++I YNKF + + A ++EGFA+EFSAILSRQ +
Sbjct: 183 GLIAAIPATIFYNKFTSEVNRQAQRLEGFADEFSAILSRQIDER 226
>gi|260429238|ref|ZP_05783215.1| protein TolQ [Citreicella sp. SE45]
gi|260419861|gb|EEX13114.1| protein TolQ [Citreicella sp. SE45]
Length = 231
Score = 249 bits (636), Expect = 3e-64, Method: Composition-based stats.
Identities = 82/230 (35%), Positives = 128/230 (55%), Gaps = 4/230 (1%)
Query: 1 MNNYGLAI---MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFR 57
M+ LA+ +D S++ LF + L VK ++ +L + S+ W++I +K V++ RR+
Sbjct: 1 MDPQTLAVAQEIDFSMWGLFARATLTVKLVMLMLVLSSVWGWAIIFEKIVSYRHARREAA 60
Query: 58 EFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMM 117
F++ FWSG+ L+ + + +F + M+EW++S G RIDR M
Sbjct: 61 RFDRAFWSGEPLDELYDQIGADPKGRAQRVFAAGMTEWRRSHRDDGGLIAGAHARIDRSM 120
Query: 118 DVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGII 176
DVAI +E EE+ L L +++SA VG+ G V G+M F IA ++V + PGI
Sbjct: 121 DVAIQKESEELQRGLPVLATVASAAPFVGLFGTVWGIMHAFIEIANQQDTSLVVVAPGIA 180
Query: 177 ESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
E+L + LGL +IP+ I YNK D+ + E FA+EFS ILSRQ +
Sbjct: 181 EALFATALGLVAAIPAVIFYNKLSADANRVIAGYEAFADEFSTILSRQLD 230
>gi|118588329|ref|ZP_01545738.1| tolQ Protein [Stappia aggregata IAM 12614]
gi|118439035|gb|EAV45667.1| tolQ Protein [Stappia aggregata IAM 12614]
Length = 234
Score = 248 bits (635), Expect = 3e-64, Method: Composition-based stats.
Identities = 99/219 (45%), Positives = 135/219 (61%), Gaps = 1/219 (0%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
IS FALF Q + VK ++ L S+ W++I+ K + RRQ FE +FWSGQSLE
Sbjct: 15 ISFFALFWQAHIVVKLVMLGLLGASVWCWAIIVDKIMLVGRTRRQMSRFETVFWSGQSLE 74
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
+ +L N N +AA+F++AM EWK+S + + +Q RIDR+MDV I RE E +
Sbjct: 75 ELYNTLHNRVNHSMAALFVAAMREWKRSHEGARPAIGSLQQRIDRVMDVTIQREAERLES 134
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVS 189
+L L ++ SA +G+ G V G+M FQ+IA S N+ V PGI E+L + LGL +
Sbjct: 135 RLLILATVGSAAPFIGLFGTVWGIMTAFQAIAASESTNLAVVAPGIAEALFATALGLLAA 194
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
IP+ IAYNKF D K +MEGFA+EFSAILSRQ +
Sbjct: 195 IPAVIAYNKFSSDVGKAVARMEGFADEFSAILSRQIDER 233
>gi|327481494|gb|AEA84804.1| TolQ protein [Pseudomonas stutzeri DSM 4166]
Length = 230
Score = 248 bits (635), Expect = 3e-64, Method: Composition-based stats.
Identities = 65/219 (29%), Positives = 115/219 (52%), Gaps = 3/219 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+S+++L V+ ++ +L S+ SW +I Q+ +R FE+ FWSG L
Sbjct: 8 MSMWSLISNASFVVQLVMLILVGASVTSWILIFQRGNMLRAAKRSLDAFEERFWSGIDLS 67
Query: 71 TVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ + ++ + G+ IF + E+ + + P + D ++R M VAI+RE E++
Sbjct: 68 KLYRQAGSNPDPDSGVEQIFRAGFKEFSRLRQQQGVDPDAVMDGVNRAMRVAISREEEKL 127
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLC 187
+ L FL ++ S +G+ G V G+M F+ +A + ++ PGI E+LI+ +GL
Sbjct: 128 EQSLPFLATVGSTSPYIGLFGTVWGIMNSFRGLAQVQQATLATVAPGIAEALIATAIGLF 187
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ IAYN+F + + FA+EF AIL R+
Sbjct: 188 AAIPAVIAYNRFSARGEMLIGRYYTFADEFQAILHRKVH 226
>gi|209886405|ref|YP_002290262.1| protein TolQ [Oligotropha carboxidovorans OM5]
gi|209874601|gb|ACI94397.1| protein TolQ [Oligotropha carboxidovorans OM5]
Length = 237
Score = 248 bits (633), Expect = 6e-64, Method: Composition-based stats.
Identities = 92/224 (41%), Positives = 142/224 (63%), Gaps = 1/224 (0%)
Query: 6 LAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS 65
+A D+S+ ALF Q + VK ++ L S+ W++ I K+ + RR FEQ FWS
Sbjct: 13 VASSDVSLIALFWQAHIVVKIVMLGLLACSVWVWAIAIDKTFLYARTRRAMDRFEQAFWS 72
Query: 66 GQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
GQS++ + ++L ++A+F++AM EWK+S + +RS G+Q RID++M V+IARE+
Sbjct: 73 GQSIDELYRALSAKPTHSMSALFVAAMREWKRSFESHSRSFAGLQTRIDKVMSVSIAREI 132
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILL 184
E + +L L ++ SA VG+ G V G+M FQSIA + ++ V PGI E+L + +
Sbjct: 133 ERLDRRLLVLATVGSASPFVGLFGTVWGIMSSFQSIAASKNTSLAVVAPGIAEALFATAI 192
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
GL +IP++I YNKF + + A ++EGFA+EFSAILSRQ +
Sbjct: 193 GLIAAIPATIFYNKFTSEVNRQAQRLEGFADEFSAILSRQIDER 236
>gi|319407736|emb|CBI81383.1| tolQ protein [Bartonella sp. 1-1C]
Length = 237
Score = 248 bits (633), Expect = 6e-64, Method: Composition-based stats.
Identities = 91/232 (39%), Positives = 144/232 (62%), Gaps = 2/232 (0%)
Query: 1 MNNYGLAIMD-ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREF 59
M A + I I +LFMQ VK ++ L SI SW++I K V++ +RR F
Sbjct: 1 MEQVEFASPETIGILSLFMQANWIVKAVMIGLIFASIWSWAIIFDKIVSYRRIRRDIHHF 60
Query: 60 EQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDV 119
E+ FWSG+SL+ + + K+ N ++ +F++AM+EWKKS KG +P+ +Q RID+ MD+
Sbjct: 61 ERNFWSGKSLDDLYTTYKSQRNNSMSIVFLAAMTEWKKSLSKGLPTPLSLQSRIDKAMDL 120
Query: 120 AIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIES 178
+ RE +I +L FL ++ SAG +G+ G V+G+M F SI+ + ++ + PGI E+
Sbjct: 121 TLGRESVKIESRLGFLATLGSAGPFIGLFGTVVGIMNSFLSISASQNTSLAIVAPGIAEA 180
Query: 179 LISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
L++ +GL +IP+ IAYNK I +S + ++E FA+EFS ILSR+ + S
Sbjct: 181 LLATAIGLFAAIPAVIAYNKLISESGQIIAKIENFADEFSTILSRRIDETTS 232
>gi|27382266|ref|NP_773795.1| tolQ protein [Bradyrhizobium japonicum USDA 110]
gi|27355437|dbj|BAC52420.1| tolQ Protein [Bradyrhizobium japonicum USDA 110]
Length = 238
Score = 247 bits (632), Expect = 7e-64, Method: Composition-based stats.
Identities = 96/223 (43%), Positives = 141/223 (63%), Gaps = 1/223 (0%)
Query: 7 AIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG 66
A D+S+ ALF Q VK ++ L S+ W++ I K F RR FEQ+FWSG
Sbjct: 15 ASADVSLIALFWQAHWIVKAVMLGLLSCSVWVWAIAIDKIFLFARTRRSMDRFEQVFWSG 74
Query: 67 QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
+S+E + ++L +AA F++AM EWK+S + ARS G+Q RID++M+V+IARE+E
Sbjct: 75 ESIEELYRTLSAKPTHSMAACFVAAMREWKRSFESHARSVAGLQMRIDKVMNVSIAREVE 134
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLG 185
+ +L L ++ SAG VG+ G V G+M FQSIA + ++ V PGI E+L + +G
Sbjct: 135 RLERRLLVLATVGSAGPFVGLFGTVWGIMSSFQSIAASKNTSLAVVAPGIAEALFATAVG 194
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
L +IP++I YNKF + + A ++EGFA+EFSAILSRQ +
Sbjct: 195 LIAAIPATIFYNKFTSEVNRQAQRLEGFADEFSAILSRQIDER 237
>gi|91978611|ref|YP_571270.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris BisB5]
gi|91685067|gb|ABE41369.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris BisB5]
Length = 227
Score = 247 bits (631), Expect = 9e-64, Method: Composition-based stats.
Identities = 90/224 (40%), Positives = 140/224 (62%), Gaps = 1/224 (0%)
Query: 6 LAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS 65
L D+S+ ALF Q VK ++ L S+ W++ I K + + +R FEQ FWS
Sbjct: 3 LVSADVSLIALFWQAHWIVKSVMLGLIGCSVWVWAIAIDKLLLYSRTKRAMDRFEQAFWS 62
Query: 66 GQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
G+S++ + ++L +AA F++AM EWK+S + +RS G+Q RI+++M+V+IARE+
Sbjct: 63 GESIDDLYRTLSAKPTHSMAACFVAAMREWKRSFESQSRSFAGLQMRIEKVMNVSIAREV 122
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILL 184
E + +L L ++ SAG VG+ G V G+M FQSIA + ++ V PGI E+L + +
Sbjct: 123 ERLERRLLVLATVGSAGPFVGLFGTVWGIMSSFQSIAASKNTSLAVVAPGIAEALFATAV 182
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
GL +IP++I YNKF + + ++EGFA+EFSAILSRQ +
Sbjct: 183 GLIAAIPATIFYNKFTSEVNRQTQRLEGFADEFSAILSRQIDER 226
>gi|163854159|ref|YP_001642202.1| protein TolQ [Methylobacterium extorquens PA1]
gi|163665764|gb|ABY33131.1| protein TolQ [Methylobacterium extorquens PA1]
Length = 238
Score = 247 bits (631), Expect = 1e-63, Method: Composition-based stats.
Identities = 93/231 (40%), Positives = 138/231 (59%), Gaps = 3/231 (1%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
M +A D+S+F LF Q VK ++ L SI WS+I+ K++ F + FE
Sbjct: 7 MQAAPVA--DMSLFGLFWQAHFVVKLVMVGLLGASIWCWSIIVDKTLLFRRTEAEMDAFE 64
Query: 61 QLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVA 120
+ FWSG+SLE + +S + GL A+F++AM EWK+S + R + RID+++DV
Sbjct: 65 EAFWSGRSLEELYRSFNDRQPTGLGALFVAAMREWKRSFEGSGRQIHSLSQRIDKVLDVT 124
Query: 121 IARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESL 179
I RE+E + +L FL S+ SAG +G+ G V G+M F SIA + ++ V PGI E+L
Sbjct: 125 IQREVERLDSRLLFLASIGSAGPYIGLFGTVWGIMTAFTSIAASKNTSLAVVAPGIAEAL 184
Query: 180 ISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
+ +GL +IP+ +AYNK K ++EGFA+EFSAILSRQ + +S
Sbjct: 185 FATAIGLFAAIPAVLAYNKLQATVSKSQSRLEGFADEFSAILSRQIDERLS 235
>gi|121602265|ref|YP_988485.1| protein TolQ [Bartonella bacilliformis KC583]
gi|120614442|gb|ABM45043.1| protein TolQ [Bartonella bacilliformis KC583]
Length = 235
Score = 247 bits (630), Expect = 1e-63, Method: Composition-based stats.
Identities = 90/232 (38%), Positives = 149/232 (64%), Gaps = 2/232 (0%)
Query: 1 MNNYGLAIMD-ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREF 59
M + LA + I ++ALF+Q VK ++ L + SI SW++I+ K + +RR R F
Sbjct: 1 MTHIDLASPETIGMWALFIQANWVVKAVMIGLVLASIWSWTIILHKIFAYRKIRRDIRHF 60
Query: 60 EQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDV 119
E+ FWSG+SLE + + +N ++A+F++AM+EWKKS KG + +Q RI++ MD+
Sbjct: 61 EKFFWSGKSLEELYTAYQNKPLNNISAVFIAAMTEWKKSLTKGIHTSPSLQIRIEKAMDL 120
Query: 120 AIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIES 178
AI RE ++I KL +L ++ SA +G+ G V+G+M F SI+ + ++ + PGI E+
Sbjct: 121 AIGRESKKIESKLGYLATLGSAAPFIGLFGTVIGIMNSFLSISASQNTSLAIVAPGIAEA 180
Query: 179 LISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
L++ +GL V+IP+ + YNKFI +S + Q+E FA+EFS I+SR+ + ++
Sbjct: 181 LLATAIGLMVAIPAVVFYNKFIGESAQIIAQIEDFADEFSTIISRRIDEKVT 232
>gi|319409336|emb|CBI82980.1| tolQ protein [Bartonella schoenbuchensis R1]
Length = 237
Score = 246 bits (629), Expect = 2e-63, Method: Composition-based stats.
Identities = 91/232 (39%), Positives = 147/232 (63%), Gaps = 2/232 (0%)
Query: 1 MNNYGLAIMD-ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREF 59
M + LA D + +++LFMQ VK ++ L + S+ SW++II K + +R ++F
Sbjct: 1 MAHIELASPDTLGMWSLFMQANWVVKAVMIGLILASVWSWAIIIDKIFTYRKIRYDIKQF 60
Query: 60 EQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDV 119
EQ FWSG+SLE + + +N H + +F++AM+EWKKS KG + + +Q RI++ MD+
Sbjct: 61 EQTFWSGKSLEELYVTYQNQHTNSICVVFIAAMTEWKKSLTKGVQPSLNLQSRIEKAMDL 120
Query: 120 AIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIES 178
A+ RE +I KL FL ++ SA +G+ G V+G+M F SI+ + ++ V PGI E+
Sbjct: 121 ALGRESAKIESKLGFLATLGSAAPFIGLFGTVVGIMNSFLSISASQNTSLAVVAPGIAEA 180
Query: 179 LISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
L++ +GL +IP+ IAYNK + +S + +EGFA+EFS I+SRQ + I+
Sbjct: 181 LLATAIGLLAAIPAVIAYNKLMHESTQIITHIEGFADEFSTIMSRQIDEKIT 232
>gi|319404772|emb|CBI78373.1| tolQ protein [Bartonella rochalimae ATCC BAA-1498]
Length = 237
Score = 246 bits (629), Expect = 2e-63, Method: Composition-based stats.
Identities = 89/221 (40%), Positives = 140/221 (63%), Gaps = 1/221 (0%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
I I +LFMQ VK ++ L SI SW++I K V++ +RR FE+ FWSGQSL+
Sbjct: 12 IGILSLFMQANWIVKAVMLGLIFASIWSWAIIFDKIVSYRRIRRDIHHFERNFWSGQSLD 71
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
+ + K+ N ++ +F++AM+EWKKS KG +P+ +Q RID+ MD+ + RE +I
Sbjct: 72 DLYSTYKSQRNNSMSIVFLAAMTEWKKSLSKGLPTPLSLQSRIDKAMDLTLGRESVKIES 131
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVS 189
+L FL ++ SAG +G+ G V+G+M F SI+ + ++ + PGI E+L++ +GL +
Sbjct: 132 RLGFLATLGSAGPFIGLFGTVVGIMNSFLSISASQNTSLAIVAPGIAEALLATAIGLFAA 191
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
IP+ IAYNK +S + ++E FA+EFS ILSR+ + S
Sbjct: 192 IPAVIAYNKLTSESGQIIAKIENFADEFSTILSRRIDETTS 232
>gi|49476144|ref|YP_034185.1| inner membrane tolQ protein [Bartonella henselae str. Houston-1]
gi|49238952|emb|CAF28250.1| inner membrane tolQ protein [Bartonella henselae str. Houston-1]
Length = 237
Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats.
Identities = 92/221 (41%), Positives = 147/221 (66%), Gaps = 1/221 (0%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
I I LFMQ G VK ++ L + SI SW++I K + + +RR+ ++FE++FWSG+ LE
Sbjct: 12 IGIVHLFMQAGFVVKAVMIGLLLASIWSWAIIFDKILTYRRIRREIKQFERIFWSGKPLE 71
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
+ + K+ ++A+FM+AM EWKKS +KG + I +Q RID+ MD+ + RE +I
Sbjct: 72 DLYATCKSQRTSSISAVFMAAMVEWKKSLEKGIHTSISLQSRIDKAMDLILGRESAKIEA 131
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVS 189
KLSFL ++ SAG +G+ G V+G+MG F SI+ + ++ + PGI E+L++ +GL +
Sbjct: 132 KLSFLATLGSAGPFIGLFGTVIGIMGSFLSISASQNTSLAIVAPGIAEALLATAIGLFAA 191
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
IP+ IAYNKF+ +S + Q+E FA+EFS I+SR+ + ++
Sbjct: 192 IPAVIAYNKFVNESAQIIAQIENFADEFSTIISRRIDETLT 232
>gi|83312313|ref|YP_422577.1| biopolymer transport protein [Magnetospirillum magneticum AMB-1]
gi|82947154|dbj|BAE52018.1| Biopolymer transport protein [Magnetospirillum magneticum AMB-1]
Length = 241
Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats.
Identities = 85/225 (37%), Positives = 132/225 (58%), Gaps = 5/225 (2%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
MD+S++ALF++ + VK ++ L + S W++I K + L + +FE+ FWSG S
Sbjct: 16 MDLSMWALFLRADIIVKFVMIALLMASFWCWAIIFDKLMKVRQLTTRADQFEEAFWSGGS 75
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPI----GIQDRIDRMMDVAIARE 124
LE + + + +++IF++AM EW++S KG + RIDR+M V + RE
Sbjct: 76 LEELYDRIGSRPLDPMSSIFVAAMREWRRSAAKGLADRDSTRASLPQRIDRVMSVTLGRE 135
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISIL 183
+E + +L FL S+ S +G+ G V G+M FQSIA + ++ V PGI E+L +
Sbjct: 136 MELLERRLGFLASVGSTAPFIGLFGTVWGIMNSFQSIAATKNTSLAVVAPGIAEALFATA 195
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
LGL +IP+ IAYNK D +++ ++E FA EF AILSRQ E
Sbjct: 196 LGLVAAIPAVIAYNKISTDLDRYSKRLENFAGEFGAILSRQLEEK 240
>gi|46201287|ref|ZP_00055338.2| COG0811: Biopolymer transport proteins [Magnetospirillum
magnetotacticum MS-1]
Length = 226
Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats.
Identities = 85/225 (37%), Positives = 130/225 (57%), Gaps = 5/225 (2%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
MD+S++ALF++ + VK ++ L S W++I K + L + +FE+ FWSG S
Sbjct: 1 MDLSMWALFLRADIIVKFVMIALLCASFWCWAIIFDKIMKVRQLTTRADQFEEAFWSGGS 60
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQ----DRIDRMMDVAIARE 124
LE + + + +++IF++AM EW++S KG + RIDR+M V + RE
Sbjct: 61 LEELYDRIGSRPLDPMSSIFVAAMREWRRSAAKGLADRDSTRASLPQRIDRVMSVTLGRE 120
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISIL 183
+E + +L FL S S +G+ G V G+M FQSIA + ++ V PGI E+L +
Sbjct: 121 MELLERRLGFLASTGSTAPFIGLFGTVWGIMNSFQSIAATKNTSLAVVAPGIAEALFATA 180
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
LGL +IP+ IAYNK D +++ ++E FA EF AILSRQ E
Sbjct: 181 LGLVAAIPAVIAYNKISNDLDRYSKRLENFAGEFGAILSRQLEEK 225
>gi|330502222|ref|YP_004379091.1| MotA/TolQ/ExbB proton channel [Pseudomonas mendocina NK-01]
gi|328916508|gb|AEB57339.1| MotA/TolQ/ExbB proton channel [Pseudomonas mendocina NK-01]
Length = 231
Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats.
Identities = 69/223 (30%), Positives = 116/223 (52%), Gaps = 3/223 (1%)
Query: 7 AIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG 66
A+ +S+++L L V+ ++ L S++SW +I Q+S +R FE FWSG
Sbjct: 5 AVDHMSMWSLISNASLVVQLVMLTLVAASVISWVMIFQRSNALRAAKRALDNFEDRFWSG 64
Query: 67 QSLETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARE 124
L + + ++ + GL IF + E+ + + P + D + R M VAI+RE
Sbjct: 65 IDLSKLYRQAGSNPDPDSGLEQIFRAGFKEFSRLRQQQGVDPDAVMDGVARAMRVAISRE 124
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISIL 183
E++ L FL ++ S +G+ G V G+M F+ +A + ++ PGI E+LI+
Sbjct: 125 EEKLETALPFLATVGSTSPYIGLFGTVWGIMNSFRGLAQVQQATLATVAPGIAEALIATA 184
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+GL +IP+ IAYN+F + + FA+EF AIL R+
Sbjct: 185 IGLFAAIPAVIAYNRFSARGEMLIGRYYTFADEFQAILHRKVH 227
>gi|90426225|ref|YP_534595.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris BisB18]
gi|90108239|gb|ABD90276.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris BisB18]
Length = 237
Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats.
Identities = 93/224 (41%), Positives = 143/224 (63%), Gaps = 1/224 (0%)
Query: 6 LAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS 65
LA D+S+ ALF+Q VK ++ L S+ W++ I K + + +R FEQ FWS
Sbjct: 13 LASSDVSLIALFLQAHWVVKAVMLGLLGCSVWVWAIAIDKMLLYSRTKRAMDRFEQAFWS 72
Query: 66 GQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
G+S++ + ++L +AA F++AM EWK+S + ARS G+Q RI+++M+V+IARE+
Sbjct: 73 GESIDELYRALSAKPTQSMAACFVAAMREWKRSFESQARSFAGLQMRIEKVMNVSIAREV 132
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILL 184
E + +L L ++ SAG VG+ G V G+M FQSIA + ++ V PGI E+L + +
Sbjct: 133 ERLERRLLVLATVGSAGPFVGLFGTVWGIMSSFQSIAASKNTSLAVVAPGIAEALFATAI 192
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
GL +IP++I YNKF + + A ++EGFA+EFSAILSRQ +
Sbjct: 193 GLIAAIPATIFYNKFASEVNRQAQRLEGFADEFSAILSRQIDER 236
>gi|240141618|ref|YP_002966098.1| membrane spanning protein in TolA-TolQ-TolR complex
[Methylobacterium extorquens AM1]
gi|240011595|gb|ACS42821.1| membrane spanning protein in TolA-TolQ-TolR complex
[Methylobacterium extorquens AM1]
Length = 232
Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats.
Identities = 93/231 (40%), Positives = 138/231 (59%), Gaps = 3/231 (1%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
M +A D+S+F LF Q VK ++ L SI WS+I+ K++ F + FE
Sbjct: 1 MQAAPVA--DMSLFGLFWQAHFVVKLVMVGLLGASIWCWSIIVDKTLLFRRTEAEMDAFE 58
Query: 61 QLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVA 120
+ FWSG+SLE + +S + GL A+F++AM EWK+S + R + RID+++DV
Sbjct: 59 EAFWSGRSLEELYRSFNDRQPTGLGALFVAAMREWKRSFEGSGRQIHSLSQRIDKVLDVT 118
Query: 121 IARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESL 179
I RE+E + +L FL S+ SAG +G+ G V G+M F SIA + ++ V PGI E+L
Sbjct: 119 IQREVERLDSRLLFLASIGSAGPYIGLFGTVWGIMTAFTSIAASKNTSLAVVAPGIAEAL 178
Query: 180 ISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
+ +GL +IP+ +AYNK K ++EGFA+EFSAILSRQ + +S
Sbjct: 179 FATAIGLFAAIPAVLAYNKLQATVAKSQSRLEGFADEFSAILSRQIDERLS 229
>gi|218533104|ref|YP_002423920.1| protein TolQ [Methylobacterium chloromethanicum CM4]
gi|254564127|ref|YP_003071222.1| TolA-TolQ-TolR complex membrane anchored protein [Methylobacterium
extorquens DM4]
gi|218525407|gb|ACK85992.1| protein TolQ [Methylobacterium chloromethanicum CM4]
gi|254271405|emb|CAX27418.1| membrane spanning protein in TolA-TolQ-TolR complex
[Methylobacterium extorquens DM4]
Length = 238
Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats.
Identities = 93/231 (40%), Positives = 138/231 (59%), Gaps = 3/231 (1%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
M +A D+S+F LF Q VK ++ L SI WS+I+ K++ F + FE
Sbjct: 7 MQAAPVA--DMSLFGLFWQAHFVVKLVMVGLLGASIWCWSIIVDKTLLFRRTEAEMDAFE 64
Query: 61 QLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVA 120
+ FWSG+SLE + +S + GL A+F++AM EWK+S + R + RID+++DV
Sbjct: 65 EAFWSGRSLEELYRSFNDRQPTGLGALFVAAMREWKRSFEGSGRQIHSLSQRIDKVLDVT 124
Query: 121 IARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESL 179
I RE+E + +L FL S+ SAG +G+ G V G+M F SIA + ++ V PGI E+L
Sbjct: 125 IQREVERLDSRLLFLASIGSAGPYIGLFGTVWGIMTAFTSIAASKNTSLAVVAPGIAEAL 184
Query: 180 ISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
+ +GL +IP+ +AYNK K ++EGFA+EFSAILSRQ + +S
Sbjct: 185 FATAIGLFAAIPAVLAYNKLQATVAKSQSRLEGFADEFSAILSRQIDERLS 235
>gi|71735754|ref|YP_275910.1| tolQ protein [Pseudomonas syringae pv. phaseolicola 1448A]
gi|71556307|gb|AAZ35518.1| tolQ protein [Pseudomonas syringae pv. phaseolicola 1448A]
gi|320323049|gb|EFW79138.1| tolQ protein [Pseudomonas syringae pv. glycinea str. B076]
gi|320329679|gb|EFW85668.1| tolQ protein [Pseudomonas syringae pv. glycinea str. race 4]
gi|330877976|gb|EGH12125.1| tolQ protein [Pseudomonas syringae pv. glycinea str. race 4]
Length = 231
Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats.
Identities = 68/218 (31%), Positives = 116/218 (53%), Gaps = 3/218 (1%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLET 71
S+++L + V+ ++ +L S+ SW VI Q+S RR FE+ FWSG L
Sbjct: 10 SMWSLVSNASIVVQLVMLILVAASVTSWIVIFQRSNMLRAGRRALDSFEERFWSGIDLSK 69
Query: 72 VCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+ + ++ + G+ IF + E+ + + P + + + R M VAI+RE E++
Sbjct: 70 LYRQAGSNPDPDSGVEQIFRAGFKEFSRLRQQSGVDPDAVMEGVARAMRVAISREEEKLE 129
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCV 188
L +L ++ S VG+ G V G+M F+ +A + ++ PGI E+LI+ +GL
Sbjct: 130 AGLPYLATVGSTSPYVGLFGTVWGIMNSFRGLATAQQATLATVAPGIAEALIATAIGLFA 189
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ IAYN+F+ S+ + FA+EF AIL R+
Sbjct: 190 AIPAVIAYNRFVARSETLISRYYTFADEFQAILHRKVH 227
>gi|296535989|ref|ZP_06898133.1| TolQ colicin import protein [Roseomonas cervicalis ATCC 49957]
gi|296263675|gb|EFH10156.1| TolQ colicin import protein [Roseomonas cervicalis ATCC 49957]
Length = 238
Score = 245 bits (626), Expect = 4e-63, Method: Composition-based stats.
Identities = 88/229 (38%), Positives = 131/229 (57%), Gaps = 3/229 (1%)
Query: 3 NYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQL 62
N G D+S++ LF+Q VK ++ L + S+ W+V+ +K + + R FE
Sbjct: 9 NLGQVAHDLSLWGLFLQADWVVKSVMLGLLLASVWVWAVVFEKVTSLRRVNRAADAFEDR 68
Query: 63 FWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSP--IGIQDRIDRMMDVA 120
FWSG SLET+ +AA+F +AM EW++S + A G+Q R +R M+VA
Sbjct: 69 FWSGGSLETLYSQEGERPTHPIAAVFGAAMREWERSSARPAEGAALAGMQQRAERAMNVA 128
Query: 121 IARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESL 179
I RE++ + + FL S+ S +G+ G V G+M F +IAG + N+ V PGI E+L
Sbjct: 129 ITREMDRLERWMVFLASVGSVAPFIGLFGTVWGIMNSFSAIAGMNNTNLAVVAPGIAEAL 188
Query: 180 ISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
+ +GL +IP+ +AYNK D +FA ++EGFA EF AILSRQ E
Sbjct: 189 FATAIGLVAAIPAVLAYNKINTDLARFAARLEGFAAEFGAILSRQAEER 237
>gi|92118975|ref|YP_578704.1| MotA/TolQ/ExbB proton channel [Nitrobacter hamburgensis X14]
gi|91801869|gb|ABE64244.1| Cell division and transport-associated protein TolQ [Nitrobacter
hamburgensis X14]
Length = 237
Score = 245 bits (625), Expect = 4e-63, Method: Composition-based stats.
Identities = 93/236 (39%), Positives = 140/236 (59%), Gaps = 8/236 (3%)
Query: 1 MNNY-------GLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLR 53
MN LA D+S+ LF VK ++ L S+ W++ I K + +
Sbjct: 1 MNPADVAQSALPLASADVSLITLFFHAHWIVKAVMLGLLGCSVWVWAIAIDKMFLYARTK 60
Query: 54 RQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRI 113
R FEQ FWSG+S+E + ++L +AA F++AM EWK+S + RS G+Q RI
Sbjct: 61 RAMDRFEQAFWSGESIEDLYRALSAKPTQSMAACFVAAMREWKRSFESQTRSFAGLQMRI 120
Query: 114 DRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSI 172
+++M+V+IARE+E + +L L ++ SAG VG+ G V G+M FQSIA + ++ V
Sbjct: 121 EKVMNVSIAREIERLERRLLVLATVGSAGPFVGLFGTVWGIMSSFQSIAASKNTSLAVVA 180
Query: 173 PGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
PGI E+L + +GL +IP++I YNKF + + A ++EGFA+EFSAILSRQ +
Sbjct: 181 PGIAEALFATAVGLIAAIPATIFYNKFTSEVNRQAQRLEGFADEFSAILSRQIDER 236
>gi|188584488|ref|YP_001927933.1| protein TolQ [Methylobacterium populi BJ001]
gi|179347986|gb|ACB83398.1| protein TolQ [Methylobacterium populi BJ001]
Length = 238
Score = 245 bits (625), Expect = 4e-63, Method: Composition-based stats.
Identities = 93/231 (40%), Positives = 138/231 (59%), Gaps = 3/231 (1%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
M +A D+S+F LF Q VK ++ L SI WS+I+ K++ F + FE
Sbjct: 7 MQAAPVA--DMSLFGLFWQAHFVVKIVMMGLLGASIWCWSIIVDKTLLFRRTEAEMDAFE 64
Query: 61 QLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVA 120
+ FWSG+SLE + +S + GL A+F++AM EWK+S + R + RID+++DV
Sbjct: 65 EAFWSGRSLEELYRSFNDRQPTGLGALFVAAMREWKRSFEGSGRQIHSLSQRIDKVLDVT 124
Query: 121 IARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESL 179
I RE+E + +L FL S+ SAG +G+ G V G+M F SIA + ++ V PGI E+L
Sbjct: 125 IQREVERLDSRLLFLASIGSAGPYIGLFGTVWGIMTAFTSIAASKNTSLAVVAPGIAEAL 184
Query: 180 ISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
+ +GL +IP+ +AYNK K ++EGFA+EFSAILSRQ + +S
Sbjct: 185 FATAIGLFAAIPAVLAYNKLQASVAKSQSRLEGFADEFSAILSRQIDERLS 235
>gi|146283141|ref|YP_001173294.1| TolQ protein [Pseudomonas stutzeri A1501]
gi|145571346|gb|ABP80452.1| TolQ protein [Pseudomonas stutzeri A1501]
Length = 221
Score = 245 bits (625), Expect = 4e-63, Method: Composition-based stats.
Identities = 64/217 (29%), Positives = 113/217 (52%), Gaps = 3/217 (1%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
+++L V+ ++ +L S+ SW +I Q+ +R FE+ FWSG L +
Sbjct: 1 MWSLISNASFVVQLVMLILVGASVTSWILIFQRGNMLRAAKRSLDAFEERFWSGIDLSKL 60
Query: 73 CKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
+ ++ + G+ IF + E+ + + P + D ++R M VAI+RE E++ +
Sbjct: 61 YRQAGSNPDPDSGVEQIFRAGFKEFSRLRQQQGVDPDAVMDGVNRAMRVAISREEEKLEQ 120
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCVS 189
L FL ++ S +G+ G V G+M F+ +A + ++ PGI E+LI+ +GL +
Sbjct: 121 SLPFLATVGSTSPYIGLFGTVWGIMNSFRGLAQVQQATLATVAPGIAEALIATAIGLFAA 180
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
IP+ IAYN+F + + FA+EF AIL R+
Sbjct: 181 IPAVIAYNRFSARGEMLIGRYYTFADEFQAILHRKVH 217
>gi|83746174|ref|ZP_00943228.1| TolQ protein [Ralstonia solanacearum UW551]
gi|207728185|ref|YP_002256579.1| tolq-related transport protein [Ralstonia solanacearum MolK2]
gi|83727140|gb|EAP74264.1| TolQ protein [Ralstonia solanacearum UW551]
gi|206591430|emb|CAQ57042.1| tolq-related transport protein [Ralstonia solanacearum MolK2]
Length = 254
Score = 245 bits (625), Expect = 5e-63, Method: Composition-based stats.
Identities = 77/231 (33%), Positives = 121/231 (52%), Gaps = 6/231 (2%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
MN + D+SI +L + L V+ ++ LL + S+ SW+ I +K+ R Q FE
Sbjct: 25 MNPAEV-TQDLSIVSLVLHASLLVQFVMGLLLVMSLFSWTYIFRKAFALRAARSQTESFE 83
Query: 61 QLFWSGQSLETVCKSLKN--HHNIGLAAIFMSAMSEWKKSCDK--GARSPIGIQDRIDRM 116
+ FW+G L+ + +S N HH L IF + M E+ K+ ++ G P I D R
Sbjct: 84 RDFWAGGDLQAMYQSAANNRHHTGALERIFEAGMREFLKTREQQRGIGDPSAILDASRRA 143
Query: 117 MDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGI 175
M A RE++ + L FL S+ S +G+ G V G+M F+ ++ + PGI
Sbjct: 144 MRAAYQREMDSLESHLPFLASVGSVSPYIGLFGTVWGIMNAFRGLSNVQQATLSAVAPGI 203
Query: 176 IESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
E+L++ +GL +IP+ IAYN++ + + A + E F EFS IL RQT
Sbjct: 204 AEALVATAIGLFAAIPAVIAYNRYATEMDRLANRFESFMEEFSNILQRQTR 254
>gi|75676904|ref|YP_319325.1| MotA/TolQ/ExbB proton channel [Nitrobacter winogradskyi Nb-255]
gi|74421774|gb|ABA05973.1| Cell division and transport-associated protein TolQ [Nitrobacter
winogradskyi Nb-255]
Length = 237
Score = 245 bits (625), Expect = 5e-63, Method: Composition-based stats.
Identities = 92/224 (41%), Positives = 140/224 (62%), Gaps = 1/224 (0%)
Query: 6 LAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS 65
LA D+S+ LF VK ++ L S+ W++ I K+ + +R FEQ FWS
Sbjct: 13 LASADVSLITLFFHAHWIVKAVMLGLLACSVWVWAIAIDKTFLYARTKRAMDRFEQAFWS 72
Query: 66 GQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
G+S+E + ++L +AA F++AM EWK+S + ARS G+Q RI+++M+V+IARE+
Sbjct: 73 GESIEDLYRALSAKPTQSMAACFVAAMREWKRSFESQARSIAGLQMRIEKVMNVSIAREV 132
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILL 184
E + +L L ++ SAG VG+ G V G+M FQSIA + ++ V PGI E+L + +
Sbjct: 133 ERLERRLLVLATVGSAGPFVGLFGTVWGIMSSFQSIAASKNTSLAVVAPGIAEALFATAI 192
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
GL +IP++I YNKF + + A ++EGFA+EFSAILSRQ +
Sbjct: 193 GLIAAIPATIFYNKFTAEVNRQAQRLEGFADEFSAILSRQIDER 236
>gi|170747181|ref|YP_001753441.1| protein TolQ [Methylobacterium radiotolerans JCM 2831]
gi|170653703|gb|ACB22758.1| protein TolQ [Methylobacterium radiotolerans JCM 2831]
Length = 238
Score = 244 bits (624), Expect = 5e-63, Method: Composition-based stats.
Identities = 89/230 (38%), Positives = 137/230 (59%), Gaps = 3/230 (1%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
M +A D+++ LF+Q VK ++ L SI WS+I+ K++ F + + FE
Sbjct: 7 MQAAPVA--DMTLLGLFLQAHFVVKIVMIGLLSASIWCWSIIVDKTLLFRRTKAEMDAFE 64
Query: 61 QLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVA 120
FWSG+SLE + +S + GLAA+F++AM EWK+S + R + RI++ +DV
Sbjct: 65 DAFWSGRSLEELFRSFNDRPATGLAAVFVAAMREWKRSFEGSGRQIQSLSQRIEKQLDVT 124
Query: 121 IARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESL 179
I RE+E + +L FL S+ SAG +G+ G V G+M F SIA + ++ V PGI E+L
Sbjct: 125 IHREVERLESRLLFLASIGSAGPYIGLFGTVWGIMTAFTSIAASKNTSLAVVAPGIAEAL 184
Query: 180 ISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNI 229
+ +GL +IP+ +AYNK + K ++E FA+EFSAILSRQ + +
Sbjct: 185 FATAIGLFAAIPAVLAYNKLQAEVSKAQSRLESFADEFSAILSRQIDERL 234
>gi|299134175|ref|ZP_07027368.1| protein TolQ [Afipia sp. 1NLS2]
gi|298590922|gb|EFI51124.1| protein TolQ [Afipia sp. 1NLS2]
Length = 237
Score = 244 bits (624), Expect = 7e-63, Method: Composition-based stats.
Identities = 95/224 (42%), Positives = 143/224 (63%), Gaps = 1/224 (0%)
Query: 6 LAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS 65
+A D+S+ ALF Q + VK ++ L S+ W++ I K + RR FEQ FWS
Sbjct: 13 VASSDVSLIALFWQAHIVVKFVMLGLLSCSVWVWAIAIDKIFLYARTRRAMDRFEQAFWS 72
Query: 66 GQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
GQS++ + ++L +AA+F++AM EWK+S + +RS G+Q RID++M V+IARE+
Sbjct: 73 GQSIDDLYRALSAKPTHSMAALFVAAMREWKRSFESHSRSFAGLQTRIDKVMSVSIAREI 132
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILL 184
E + +L L ++ SAG VG+ G V G+M FQSIA + ++ V PGI E+L + +
Sbjct: 133 ERLDRRLLVLATVGSAGPFVGLFGTVWGIMSSFQSIAASKNTSLAVVAPGIAEALFATAM 192
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
GL +IP++I YNKFI + + A ++EGFA+EFSAILSRQ +
Sbjct: 193 GLIAAIPATIFYNKFISEVGRQAQRLEGFADEFSAILSRQIDER 236
>gi|85714383|ref|ZP_01045371.1| MotA/TolQ/ExbB proton channel [Nitrobacter sp. Nb-311A]
gi|85698830|gb|EAQ36699.1| MotA/TolQ/ExbB proton channel [Nitrobacter sp. Nb-311A]
Length = 237
Score = 244 bits (623), Expect = 7e-63, Method: Composition-based stats.
Identities = 92/224 (41%), Positives = 139/224 (62%), Gaps = 1/224 (0%)
Query: 6 LAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS 65
LA D+S+ LF VK ++ L S+ W++ I K + +R FEQ FWS
Sbjct: 13 LASADVSLITLFFHAHWIVKAVMLGLLACSVWVWAIAIDKMFLYTRTKRAMDRFEQAFWS 72
Query: 66 GQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
G+S+E + ++L +AA F++AM EWK+S + ARS G+Q RI+++M+V+IARE+
Sbjct: 73 GESIEDLYRALSAKPTQSMAACFVAAMREWKRSFESQARSIAGLQMRIEKVMNVSIAREI 132
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILL 184
E + +L L ++ SAG VG+ G V G+M FQSIA + ++ V PGI E+L + +
Sbjct: 133 ERLERRLLVLATVGSAGPFVGLFGTVWGIMSSFQSIAASKNTSLAVVAPGIAEALFATAI 192
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
GL +IP++I YNKF + + A ++EGFA+EFSAILSRQ +
Sbjct: 193 GLIAAIPATIFYNKFTAEVNRQAQRLEGFADEFSAILSRQIDER 236
>gi|310816580|ref|YP_003964544.1| MotA/TolQ/ExbB proton channel [Ketogulonicigenium vulgare Y25]
gi|308755315|gb|ADO43244.1| MotA/TolQ/ExbB proton channel [Ketogulonicigenium vulgare Y25]
Length = 216
Score = 244 bits (623), Expect = 7e-63, Method: Composition-based stats.
Identities = 73/216 (33%), Positives = 120/216 (55%), Gaps = 1/216 (0%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
++ALF + L VK ++ LL + S+ W++++ K + + + + +F++ FWSG+ L+ +
Sbjct: 1 MWALFARATLIVKIVMILLVLASVWCWAIVVDKYIQYRRAKAEAEQFDRAFWSGEPLDLL 60
Query: 73 CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKL 132
+ + + + +F + M EW++S G RI+R MDV I +E E + + L
Sbjct: 61 YQQIGPNPDGASQRVFAAGMGEWRRSHRTDGALIPGALSRIERAMDVVIGKESERLQKGL 120
Query: 133 SFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIP 191
L ++ S VG+ G V G+M F IA + N+ V PGI E+L + LGL +IP
Sbjct: 121 PVLATVGSVAPFVGLFGTVWGIMNAFVEIAAQQNTNLAVVAPGIAEALFATGLGLVAAIP 180
Query: 192 SSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEG 227
+ I YNKF D+ + E FA+EFS ILSRQ +
Sbjct: 181 AVIFYNKFNTDADRITASHEVFADEFSTILSRQLDA 216
>gi|28871120|ref|NP_793739.1| tolQ protein [Pseudomonas syringae pv. tomato str. DC3000]
gi|66044660|ref|YP_234501.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. syringae
B728a]
gi|213969188|ref|ZP_03397327.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. tomato T1]
gi|237800221|ref|ZP_04588682.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. oryzae str.
1_6]
gi|257487007|ref|ZP_05641048.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. tabaci ATCC
11528]
gi|289626499|ref|ZP_06459453.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. aesculi
str. NCPPB3681]
gi|289650945|ref|ZP_06482288.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. aesculi
str. 2250]
gi|289674674|ref|ZP_06495564.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. syringae
FF5]
gi|298488206|ref|ZP_07006242.1| MotA/TolQ/ExbB proton channel family protein [Pseudomonas
savastanoi pv. savastanoi NCPPB 3335]
gi|301384817|ref|ZP_07233235.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. tomato
Max13]
gi|302063529|ref|ZP_07255070.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. tomato K40]
gi|302130607|ref|ZP_07256597.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. tomato
NCPPB 1108]
gi|302187154|ref|ZP_07263827.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. syringae
642]
gi|28854370|gb|AAO57434.1| tolQ protein [Pseudomonas syringae pv. tomato str. DC3000]
gi|63255367|gb|AAY36463.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. syringae
B728a]
gi|213926186|gb|EEB59742.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. tomato T1]
gi|298157264|gb|EFH98348.1| MotA/TolQ/ExbB proton channel family protein [Pseudomonas
savastanoi pv. savastanoi NCPPB 3335]
gi|330868615|gb|EGH03324.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. aesculi
str. 0893_23]
gi|330872650|gb|EGH06799.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv.
morsprunorum str. M302280PT]
gi|330892243|gb|EGH24904.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. mori str.
301020]
gi|330896131|gb|EGH28352.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. japonica
str. M301072PT]
gi|330936715|gb|EGH40902.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. pisi str.
1704B]
gi|330950606|gb|EGH50866.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae Cit 7]
gi|330959268|gb|EGH59528.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. maculicola
str. ES4326]
gi|330964827|gb|EGH65087.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. actinidiae
str. M302091]
gi|330968888|gb|EGH68954.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. aceris str.
M302273PT]
gi|330988972|gb|EGH87075.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. lachrymans
str. M301315]
gi|331009351|gb|EGH89407.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. tabaci ATCC
11528]
gi|331016442|gb|EGH96498.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. lachrymans
str. M302278PT]
gi|331023078|gb|EGI03135.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. oryzae str.
1_6]
Length = 231
Score = 244 bits (623), Expect = 7e-63, Method: Composition-based stats.
Identities = 68/218 (31%), Positives = 115/218 (52%), Gaps = 3/218 (1%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLET 71
S+++L + V+ ++ +L S+ SW VI Q+S RR FE+ FWSG L
Sbjct: 10 SMWSLVSNASIVVQLVMLILVAASVTSWIVIFQRSNMLRAGRRALDSFEERFWSGIDLSK 69
Query: 72 VCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+ + ++ + G+ IF + E+ + + P + + + R M VAI+RE E++
Sbjct: 70 LYRQAGSNPDPDSGVEQIFRAGFKEFSRLRQQSGVDPDAVMEGVARAMRVAISREEEKLE 129
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCV 188
L +L ++ S VG+ G V G+M F+ +A + ++ PGI E+LI+ +GL
Sbjct: 130 AGLPYLATVGSTSPYVGLFGTVWGIMNSFRGLATAQQATLATVAPGIAEALIATAIGLFA 189
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ IAYN+F S+ + FA+EF AIL R+
Sbjct: 190 AIPAVIAYNRFAARSETLISRYYTFADEFQAILHRKVH 227
>gi|312962756|ref|ZP_07777244.1| biopolymer transport protein TolQ [Pseudomonas fluorescens WH6]
gi|311282973|gb|EFQ61566.1| biopolymer transport protein TolQ [Pseudomonas fluorescens WH6]
Length = 231
Score = 244 bits (623), Expect = 9e-63, Method: Composition-based stats.
Identities = 65/218 (29%), Positives = 115/218 (52%), Gaps = 3/218 (1%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLET 71
S+++L + V+ ++ +L S+ SW +I Q+S RR FE+ FWSG L
Sbjct: 10 SMWSLVSNASVVVQLVMLILVAASVTSWVMIFQRSNLLRAGRRALESFEERFWSGIDLSK 69
Query: 72 VCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+ + ++ + G+ IF + E+ + + P + + + R M VAI+RE E++
Sbjct: 70 LYRQAGSNPDPDSGVEQIFRAGFKEFSRLRQQPGVDPEAVMEGVARAMRVAISREEEKLE 129
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCV 188
+ L FL ++ S +G+ G V G+M F+ +A + ++ PGI E+L++ +GL
Sbjct: 130 QSLPFLATVGSVSPYIGLFGTVWGIMNSFRGLAQAQQATLATVAPGIAEALVATAIGLFA 189
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ IAYN+F + + FA+EF AIL R+
Sbjct: 190 AIPAVIAYNRFAARGENLIGRYYTFADEFQAILHRKVH 227
>gi|112774536|gb|ABI20705.1| putative MotA/TolQ/ExbB proton channel [Delftia sp. AN3]
Length = 263
Score = 243 bits (622), Expect = 1e-62, Method: Composition-based stats.
Identities = 74/228 (32%), Positives = 114/228 (50%), Gaps = 3/228 (1%)
Query: 6 LAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS 65
+ D+SI +L +Q V+ ++ +L S+ SW+ I +KS +R FEQ FWS
Sbjct: 30 MNSHDMSILSLVLQASWVVQLVMLILVGASVASWATIFRKSQTLKRVRSLNDGFEQDFWS 89
Query: 66 GQSLETVCKSLKNH--HNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAR 123
G SL + S +H + IF S M E++K ++ + D R M + R
Sbjct: 90 GTSLNDLYASAAHHAKQGGPMERIFASGMREYQKLRERRIADVNQLMDGTRRAMRASFQR 149
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISI 182
E++E+ LSFLG++ S VG+ G V G+M F A + ++ PGI E+L++
Sbjct: 150 EMDEVESGLSFLGTVGSVSPYVGLFGTVWGVMHAFTGFANMEQITLATVAPGIAEALVAT 209
Query: 183 LLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
+GL +IP+ AYN++ + A Q E F EFS IL R S
Sbjct: 210 AMGLFAAIPAVTAYNRYAHQIDRVASQQETFIEEFSNILQRNVGATGS 257
>gi|49081978|gb|AAT50389.1| PA0969 [synthetic construct]
Length = 232
Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats.
Identities = 65/218 (29%), Positives = 113/218 (51%), Gaps = 3/218 (1%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLET 71
S+++L + V+ ++ L S+ SW +I Q+ ++ FE+ FWSG L
Sbjct: 10 SMWSLISNASIVVQLVMLTLVAASVTSWIMIFQRGNAMRAAKKALDAFEERFWSGIDLSK 69
Query: 72 VCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+ + ++ + G+ IF + E+ + + P + + + R M VAI+RE E++
Sbjct: 70 LYRQAGSNPDPDSGVEQIFRAGFKEFSRLRQQPGVDPDAVMEGVARAMRVAISREEEKLE 129
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCV 188
L FL ++ S VG+ G V G+M F+ +A + ++ PGI E+LI+ +GL
Sbjct: 130 ASLPFLATVGSTSPYVGLFGTVWGIMNSFRGLATVQQATLATVAPGIAEALIATAIGLFA 189
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ IAYN+F S+ + FA+EF AIL R+
Sbjct: 190 AIPAVIAYNRFSARSEMLIGRYYTFADEFQAILHRKVH 227
>gi|89094840|ref|ZP_01167773.1| TolQ protein [Oceanospirillum sp. MED92]
gi|89080895|gb|EAR60134.1| TolQ protein [Oceanospirillum sp. MED92]
Length = 226
Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats.
Identities = 68/221 (30%), Positives = 118/221 (53%), Gaps = 3/221 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+SI++L + V+ ++ +L + S++SW +I Q+ + R+ R FE FWSG L
Sbjct: 5 MSIWSLVANASVVVQLVMLMLLMASVISWVMIFQRQAVLSSARKSLRNFEDRFWSGVDLG 64
Query: 71 TVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ + + + N G IF + + E+ + + P + D I R M VA+ARE +++
Sbjct: 65 QLFREINHEPNSDCGAENIFRAGIKEYTRLTQQPGYDPDSVMDGIQRSMRVALAREEDKL 124
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV-SIPGIIESLISILLGLC 187
L FL ++ S +G+ G V G+M F+ +A + + PGI E+LI+ +GL
Sbjct: 125 ERHLPFLATVGSTSPYIGLFGTVWGIMNSFRGLANVHQATLASVAPGISEALIATAIGLF 184
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
+IP+ IAYN++ + E FA+EFS+IL R+ +
Sbjct: 185 AAIPAVIAYNRYSAQVEYLLGNYETFADEFSSILHRRMHAS 225
>gi|15596166|ref|NP_249660.1| TolQ protein [Pseudomonas aeruginosa PAO1]
gi|107100425|ref|ZP_01364343.1| hypothetical protein PaerPA_01001450 [Pseudomonas aeruginosa PACS2]
gi|116048894|ref|YP_792305.1| TolQ protein [Pseudomonas aeruginosa UCBPP-PA14]
gi|152986028|ref|YP_001349888.1| TolQ protein [Pseudomonas aeruginosa PA7]
gi|218893060|ref|YP_002441929.1| TolQ protein [Pseudomonas aeruginosa LESB58]
gi|254245252|ref|ZP_04938574.1| TolQ protein [Pseudomonas aeruginosa 2192]
gi|296390672|ref|ZP_06880147.1| TolQ protein [Pseudomonas aeruginosa PAb1]
gi|313105856|ref|ZP_07792119.1| TolQ protein [Pseudomonas aeruginosa 39016]
gi|1729993|sp|P50598|TOLQ_PSEAE RecName: Full=Protein tolQ
gi|9946876|gb|AAG04358.1|AE004530_11 TolQ protein [Pseudomonas aeruginosa PAO1]
gi|1103860|gb|AAC44658.1| TolQ [Pseudomonas aeruginosa]
gi|115584115|gb|ABJ10130.1| TolQ protein [Pseudomonas aeruginosa UCBPP-PA14]
gi|126198630|gb|EAZ62693.1| TolQ protein [Pseudomonas aeruginosa 2192]
gi|150961186|gb|ABR83211.1| protein TolQ [Pseudomonas aeruginosa PA7]
gi|218773288|emb|CAW29100.1| TolQ protein [Pseudomonas aeruginosa LESB58]
gi|310878621|gb|EFQ37215.1| TolQ protein [Pseudomonas aeruginosa 39016]
Length = 231
Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats.
Identities = 65/218 (29%), Positives = 113/218 (51%), Gaps = 3/218 (1%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLET 71
S+++L + V+ ++ L S+ SW +I Q+ ++ FE+ FWSG L
Sbjct: 10 SMWSLISNASIVVQLVMLTLVAASVTSWIMIFQRGNAMRAAKKALDAFEERFWSGIDLSK 69
Query: 72 VCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+ + ++ + G+ IF + E+ + + P + + + R M VAI+RE E++
Sbjct: 70 LYRQAGSNPDPDSGVEQIFRAGFKEFSRLRQQPGVDPDAVMEGVARAMRVAISREEEKLE 129
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCV 188
L FL ++ S VG+ G V G+M F+ +A + ++ PGI E+LI+ +GL
Sbjct: 130 ASLPFLATVGSTSPYVGLFGTVWGIMNSFRGLATVQQATLATVAPGIAEALIATAIGLFA 189
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ IAYN+F S+ + FA+EF AIL R+
Sbjct: 190 AIPAVIAYNRFSARSEMLIGRYYTFADEFQAILHRKVH 227
>gi|58040116|ref|YP_192080.1| MotA/TolQ/ExbB proton channel family protein [Gluconobacter oxydans
621H]
gi|58002530|gb|AAW61424.1| MotA/TolQ/ExbB proton channel family protein [Gluconobacter oxydans
621H]
Length = 247
Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats.
Identities = 83/227 (36%), Positives = 129/227 (56%), Gaps = 3/227 (1%)
Query: 5 GLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFW 64
+ +S LF+ + VK ++ L + S W++I +K + + R+ EFE FW
Sbjct: 12 AVGATGLSPLDLFLHASIVVKLVMLGLLLCSAGVWAIIAEKIILIRRVNREATEFEDRFW 71
Query: 65 SGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGA--RSPIGIQDRIDRMMDVAIA 122
SG SL+ + +S +AA+F +AM EW++S G S G+++R+DR +D+ I
Sbjct: 72 SGGSLDDLYESDGARPTHPMAAVFGAAMGEWRRSARIGGIDLSRGGVRERVDRAIDITIM 131
Query: 123 RELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLIS 181
RE + +T +L FL ++ VG+ G V G+M F SIA ++ N+ V PGI E+L +
Sbjct: 132 RENDRLTRRLIFLATIGPVAPFVGLFGTVWGIMHSFASIAQMHNTNLSVVAPGISEALFA 191
Query: 182 ILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
+GL +IP+ IAYN +KFA +ME F EF+AILSRQ+E
Sbjct: 192 TAIGLVTAIPAYIAYNGLSNSFEKFADRMEAFGTEFAAILSRQSEER 238
>gi|146306306|ref|YP_001186771.1| MotA/TolQ/ExbB proton channel [Pseudomonas mendocina ymp]
gi|145574507|gb|ABP84039.1| Cell division and transport-associated protein TolQ [Pseudomonas
mendocina ymp]
Length = 231
Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats.
Identities = 69/223 (30%), Positives = 116/223 (52%), Gaps = 3/223 (1%)
Query: 7 AIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG 66
A+ +S+++L L V+ ++ L S++SW +I Q+S +R FE FWSG
Sbjct: 5 AVDHMSMWSLISNASLLVQLVMLTLVAASVISWVMIFQRSNAIRAAKRALDNFEDRFWSG 64
Query: 67 QSLETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARE 124
L + + ++ + GL IF + E+ + + P + D + R M VAI+RE
Sbjct: 65 IDLSKLYRQAGSNPDPDSGLEQIFRAGFKEFSRLRQQQGVDPDAVMDGVARAMRVAISRE 124
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISIL 183
E++ L FL ++ S +G+ G V G+M F+ +A + ++ PGI E+LI+
Sbjct: 125 EEKLETALPFLATVGSTSPYIGLFGTVWGIMNSFRGLAQVQQATLATVAPGIAEALIATA 184
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+GL +IP+ IAYN+F + + FA+EF AIL R+
Sbjct: 185 IGLFAAIPAVIAYNRFSARGEMLIGRYYTFADEFQAILHRKVH 227
>gi|83647599|ref|YP_436034.1| biopolymer transport protein [Hahella chejuensis KCTC 2396]
gi|83635642|gb|ABC31609.1| Biopolymer transport protein [Hahella chejuensis KCTC 2396]
Length = 227
Score = 243 bits (620), Expect = 2e-62, Method: Composition-based stats.
Identities = 71/223 (31%), Positives = 116/223 (52%), Gaps = 3/223 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+SI+AL V+ ++ +L SI+SW +I Q++ F RR +FE+ FWSG L
Sbjct: 5 LSIWALISNASFLVQIVMLILLAASIVSWMIIFQRARIFGLARRATTKFEERFWSGMDLN 64
Query: 71 TVCKS--LKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ + + N G+ IF S E+ + + P + + R M VA++RE++ +
Sbjct: 65 QLYRESSAAPNPNSGMEQIFRSGFKEFSRLRQQAGVDPDAVMEGTQRSMRVAMSREMDRL 124
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
L FL ++ S +G+ G V G+M F+ +A + PGI E+LI+ +GL
Sbjct: 125 EAHLPFLATVGSTTPYIGLFGTVWGIMNSFRGLAHLQQATISTVAPGISEALIATAMGLF 184
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
+IP+ IAYN++ S+ A + FA EFS+IL R+ S
Sbjct: 185 AAIPAVIAYNRYSARSESLANSFQTFAEEFSSILHRRVHAKSS 227
>gi|91227607|ref|ZP_01261911.1| TolQ protein [Vibrio alginolyticus 12G01]
gi|269967689|ref|ZP_06181739.1| tolQ protein [Vibrio alginolyticus 40B]
gi|91188500|gb|EAS74793.1| TolQ protein [Vibrio alginolyticus 12G01]
gi|269827776|gb|EEZ82060.1| tolQ protein [Vibrio alginolyticus 40B]
Length = 232
Score = 242 bits (619), Expect = 2e-62, Method: Composition-based stats.
Identities = 72/219 (32%), Positives = 114/219 (52%), Gaps = 3/219 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
DISI LF+Q L VK ++ L SI+SW++II++S + +FE FWSG L
Sbjct: 4 DISILDLFLQASLLVKLVMLTLLGMSIVSWAMIIKRSKVLSQASKNAEQFEDKFWSGTDL 63
Query: 70 ETVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + +K + G IF + +E+ + A SP I + R M VA++RE++E
Sbjct: 64 SQLYQKVKARKDEIEGTEEIFYAGFTEFARLRKSNANSPAYIMEGTGRAMRVAVSREVDE 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
+ L FL ++ S +G+ G V G+M F ++ + + PGI E+LI+ +GL
Sbjct: 124 LETSLPFLATVGSISPYIGLFGTVWGIMHAFIALGEVKQATLSMVAPGIAEALIATAMGL 183
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ +AYN+ K F+ EF +IL RQ
Sbjct: 184 FAAIPAVMAYNRLSNKVSKLEHTYATFSEEFHSILHRQA 222
>gi|329113833|ref|ZP_08242604.1| Protein TolQ [Acetobacter pomorum DM001]
gi|326696843|gb|EGE48513.1| Protein TolQ [Acetobacter pomorum DM001]
Length = 246
Score = 242 bits (619), Expect = 2e-62, Method: Composition-based stats.
Identities = 80/225 (35%), Positives = 129/225 (57%), Gaps = 3/225 (1%)
Query: 7 AIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG 66
A D+S++ALFM L VK ++ L I S++ W++I+ K V + R+ FE FWSG
Sbjct: 21 AAGDLSVWALFMHASLVVKIVMLGLLICSVMVWAIILDKFVTLRRINREATGFEDRFWSG 80
Query: 67 QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARS--PIGIQDRIDRMMDVAIARE 124
SL+ + +S ++A+F +AM EW++S G+++R+DR + + I RE
Sbjct: 81 GSLDDLYESDGAKPTNPMSAVFGAAMGEWRRSARIPGVDLVRGGVKERVDRAIGITITRE 140
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISIL 183
++ + + FL +++ VG+ G V G+M F SIA ++ N+ V PGI E+L +
Sbjct: 141 MDRLRRWVIFLATVAPVAPFVGLFGTVWGIMHSFSSIAAEHNTNLSVVAPGISEALFATA 200
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
+GL +IP+ +AYN F ++EGF EF+AILSRQ+E
Sbjct: 201 IGLLTAIPAYVAYNVISNSMDLFQDRLEGFGTEFAAILSRQSEER 245
>gi|296447813|ref|ZP_06889726.1| protein TolQ [Methylosinus trichosporium OB3b]
gi|296254672|gb|EFH01786.1| protein TolQ [Methylosinus trichosporium OB3b]
Length = 246
Score = 242 bits (619), Expect = 2e-62, Method: Composition-based stats.
Identities = 87/219 (39%), Positives = 141/219 (64%), Gaps = 1/219 (0%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
++ISI+ +F+ + VK ++ L SI W++I+ K + F RR FE++FWSG S
Sbjct: 15 VEISIWGMFLGAHIVVKLVMIGLLAASIWCWAIIVDKVILFTRTRRAMDRFEEVFWSGSS 74
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
LE + L++ +A++F++AM EWK+S S +G+Q RID+++DV+IARE+E++
Sbjct: 75 LEDLYSKLQDRPTGAMASLFVAAMREWKRSFQTAGASFMGLQARIDKVLDVSIAREVEKL 134
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
L L +++SAG VG+ G V G+M F+SIA + ++ V PGI E+L++ +GL
Sbjct: 135 ESNLLVLATVASAGPFVGLFGTVWGIMTSFRSIAASKNTSLAVVAPGIAEALLATAIGLF 194
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ +AYNK D + +++ FA+EFSAILSRQ +
Sbjct: 195 AAIPALVAYNKLQGDVARAQARLDSFADEFSAILSRQID 233
>gi|323138234|ref|ZP_08073306.1| protein TolQ [Methylocystis sp. ATCC 49242]
gi|322396486|gb|EFX99015.1| protein TolQ [Methylocystis sp. ATCC 49242]
Length = 247
Score = 242 bits (618), Expect = 3e-62, Method: Composition-based stats.
Identities = 92/223 (41%), Positives = 144/223 (64%), Gaps = 2/223 (0%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
DI+I+++F + VK ++ L + S+ W++II K++ F +RR FE+ FWSG SL
Sbjct: 17 DITIWSMFWGAHIVVKFVMVGLLLASVWCWAIIIDKTLLFSRMRRAMDRFEESFWSGNSL 76
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSP-IGIQDRIDRMMDVAIARELEEI 128
E + L G+A +F++AM EWK+S GA + +G+Q RI++++DV+IARE+E++
Sbjct: 77 EELYGKLSERPTTGMATLFVAAMREWKRSFQSGASASFMGLQARIEKVLDVSIAREVEKL 136
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
L L +++SAG VG+ G V G+M F+SIA + ++ V PGI E+L++ +GL
Sbjct: 137 ESNLLVLATVASAGPFVGLFGTVWGIMTSFRSIAASKNTSLAVVAPGIAEALLATAIGLF 196
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
+IP+ IAYNK D K +ME FA+EFSAILSRQ + + +
Sbjct: 197 AAIPALIAYNKMQGDVAKAQARMESFADEFSAILSRQIDQHAA 239
>gi|163745822|ref|ZP_02153181.1| MotA/TolQ/ExbB proton channel [Oceanibulbus indolifex HEL-45]
gi|161380567|gb|EDQ04977.1| MotA/TolQ/ExbB proton channel [Oceanibulbus indolifex HEL-45]
Length = 231
Score = 242 bits (618), Expect = 3e-62, Method: Composition-based stats.
Identities = 78/219 (35%), Positives = 126/219 (57%), Gaps = 1/219 (0%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
+D S++ LF + + VK ++ +L S SWS+I+QK++ + R + +F+Q FWSG+
Sbjct: 12 IDFSLWGLFAKATVTVKLVMIMLIGASFWSWSIIVQKTIQYRKARAEAAQFDQAFWSGEP 71
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
L+ + ++ + IF + MSEW++S + G RIDR MDVAI++E E +
Sbjct: 72 LDGLFDNIGADPDGSSEKIFAAGMSEWRRSHREDGALIPGATARIDRSMDVAISKEAERL 131
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
+ L L ++ S VG+ G V G+M F IA + N+ V PGI E+L++ +GL
Sbjct: 132 QKGLPVLATVGSTAPFVGLFGTVFGIMNSFIEIAAQQNTNLAVVAPGIAEALLATGIGLL 191
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ + YNK DS + E F++EF+ ILSRQ +
Sbjct: 192 AAIPAVVFYNKLSADSDRILGNYEAFSDEFATILSRQLD 230
>gi|254441621|ref|ZP_05055114.1| protein TolQ [Octadecabacter antarcticus 307]
gi|198251699|gb|EDY76014.1| protein TolQ [Octadecabacter antarcticus 307]
Length = 224
Score = 242 bits (617), Expect = 4e-62, Method: Composition-based stats.
Identities = 79/221 (35%), Positives = 124/221 (56%), Gaps = 1/221 (0%)
Query: 7 AIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG 66
A D +++ +F + V+ ++ LL I S+ W+VI+ K V + R + R F++ FWSG
Sbjct: 3 AATDFTMWGMFAHATIPVQFVMILLIIASVWCWAVIVDKWVQYRKARAEARIFDEAFWSG 62
Query: 67 QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
L+ + + IF + M EW++S + G RIDR MDVAIA+E E
Sbjct: 63 NPLDELFDRIGATPKGSSEKIFAAGMLEWRRSHRQDGGLIAGATARIDRSMDVAIAKETE 122
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLG 185
+ L+ L ++ S+ +G+LG V+G+M F IA + N+ V PGI E+L++ LG
Sbjct: 123 RLQRGLTVLATVGSSAPFIGLLGTVMGIMNAFIEIAEQQNTNLAVVAPGIAEALLATGLG 182
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
L +IP+ I YNK+ D+ + E FA+EF+ ILSRQ +
Sbjct: 183 LMAAIPAVIYYNKYSADADRVVRGYEAFADEFATILSRQLD 223
>gi|258543666|ref|YP_003189099.1| ExbB/TolQ/MotA [Acetobacter pasteurianus IFO 3283-01]
gi|256634744|dbj|BAI00720.1| ExbB/TolQ/MotA [Acetobacter pasteurianus IFO 3283-01]
gi|256637800|dbj|BAI03769.1| ExbB/TolQ/MotA [Acetobacter pasteurianus IFO 3283-03]
gi|256640854|dbj|BAI06816.1| ExbB/TolQ/MotA [Acetobacter pasteurianus IFO 3283-07]
gi|256643909|dbj|BAI09864.1| ExbB/TolQ/MotA [Acetobacter pasteurianus IFO 3283-22]
gi|256646964|dbj|BAI12912.1| ExbB/TolQ/MotA [Acetobacter pasteurianus IFO 3283-26]
gi|256650017|dbj|BAI15958.1| ExbB/TolQ/MotA [Acetobacter pasteurianus IFO 3283-32]
gi|256653007|dbj|BAI18941.1| ExbB/TolQ/MotA [Acetobacter pasteurianus IFO 3283-01-42C]
gi|256656061|dbj|BAI21988.1| ExbB/TolQ/MotA [Acetobacter pasteurianus IFO 3283-12]
Length = 246
Score = 242 bits (617), Expect = 4e-62, Method: Composition-based stats.
Identities = 80/225 (35%), Positives = 129/225 (57%), Gaps = 3/225 (1%)
Query: 7 AIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG 66
A D+S++ALFM L VK ++ L I S++ W++I+ K V + R+ FE FWSG
Sbjct: 21 AAGDLSVWALFMHASLVVKIVMLGLLICSVMVWAIILDKFVTLRRINREATGFEDRFWSG 80
Query: 67 QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARS--PIGIQDRIDRMMDVAIARE 124
SL+ + +S ++A+F +AM EW++S G+++R+DR + + I RE
Sbjct: 81 GSLDDLYESDGAKPTNPMSAVFGAAMGEWRRSARIPGVDLVRGGVKERVDRAIGITITRE 140
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISIL 183
++ + + FL +++ VG+ G V G+M F SIA ++ N+ V PGI E+L +
Sbjct: 141 MDRLRRWVIFLATVAPVAPFVGLFGTVWGIMHSFSSIAAEHNTNLSVVAPGISEALFATA 200
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
+GL +IP+ +AYN F ++EGF EF+AILSRQ+E
Sbjct: 201 IGLLTAIPAYVAYNVISNSMDLFQDRLEGFGTEFAAILSRQSEER 245
>gi|27365497|ref|NP_761025.1| protein TolQ [Vibrio vulnificus CMCP6]
gi|37680462|ref|NP_935071.1| tol biopolymer transport system, TolQ protein [Vibrio vulnificus
YJ016]
gi|320155879|ref|YP_004188258.1| motA/TolQ/ExbB proton channel family protein [Vibrio vulnificus
MO6-24/O]
gi|27361645|gb|AAO10552.1| protein TolQ [Vibrio vulnificus CMCP6]
gi|37199210|dbj|BAC95042.1| tol biopolymer transport system, TolQ protein [Vibrio vulnificus
YJ016]
gi|319931191|gb|ADV86055.1| motA/TolQ/ExbB proton channel family protein [Vibrio vulnificus
MO6-24/O]
Length = 227
Score = 242 bits (617), Expect = 4e-62, Method: Composition-based stats.
Identities = 71/219 (32%), Positives = 114/219 (52%), Gaps = 3/219 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
DISI LF+Q L VK ++ L S++SW++II++S + EFE FWSG L
Sbjct: 4 DISILDLFLQASLLVKLVMLTLLGMSVVSWAMIIKRSKVLSKAAKDAEEFEDKFWSGIDL 63
Query: 70 ETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + +K + G IF + +E+ + SP + + R M VA++RE++E
Sbjct: 64 SQLYQQIKARKDELSGTEEIFYAGFTEFARLRKTNPTSPDFVMEGTGRAMRVAVSREVDE 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
+ L FL ++ S +G+ G V G+M F ++ + + PGI E+LI+ +GL
Sbjct: 124 LETSLPFLATVGSITPYIGLFGTVWGIMHAFIALGEVKQATLSMVAPGIAEALIATAMGL 183
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ +AYN+F K F+ EF +IL RQ
Sbjct: 184 FAAIPAVMAYNRFASKVGKLEHNYSTFSEEFHSILHRQA 222
>gi|254506113|ref|ZP_05118257.1| protein TolQ [Vibrio parahaemolyticus 16]
gi|219550931|gb|EED27912.1| protein TolQ [Vibrio parahaemolyticus 16]
Length = 232
Score = 242 bits (617), Expect = 4e-62, Method: Composition-based stats.
Identities = 69/219 (31%), Positives = 113/219 (51%), Gaps = 3/219 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
DIS+ LF+Q L VK ++ L S++SW++II++S + FE FWSG L
Sbjct: 4 DISMLDLFLQASLLVKMVMLTLLGMSVVSWAMIIKRSKVLSQASKDADAFEDKFWSGTDL 63
Query: 70 ETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ ++ K + G IF S +E+ + + SP I + R M V++ARE++E
Sbjct: 64 SILYQNAKKRKDELSGTEEIFYSGFTEFARLRKSNSDSPDYIMEGTGRSMRVSVAREVDE 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ L FL ++ S +G+ G V G+M F ++ + + PGI E+L++ +GL
Sbjct: 124 LETNLPFLATVGSISPYIGLFGTVWGIMHAFIALGEVKQATLAMVAPGIAEALVATAMGL 183
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ +AYN+ K F+ EF +IL RQ
Sbjct: 184 FAAIPAVMAYNRLSNKVSKLEHNYATFSEEFHSILHRQA 222
>gi|229592298|ref|YP_002874417.1| TolQ protein [Pseudomonas fluorescens SBW25]
gi|229364164|emb|CAY51814.1| TolQ protein [Pseudomonas fluorescens SBW25]
Length = 231
Score = 242 bits (617), Expect = 4e-62, Method: Composition-based stats.
Identities = 67/218 (30%), Positives = 115/218 (52%), Gaps = 3/218 (1%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLET 71
S+++L + V+ ++ L S+ SW +I Q+S RR FE+ FWSG L
Sbjct: 10 SMWSLVSNASVVVQLVMLTLVAASVTSWVMIFQRSNLLRAGRRALESFEERFWSGIDLSK 69
Query: 72 VCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+ + ++ + G+ IF + E+ + + P + + + R M VAI+RE E++
Sbjct: 70 LYRQAGSNPDPDSGVEQIFRAGFKEFSRLRQQPGVDPEAVMEGVARAMRVAISREEEKLE 129
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCV 188
+ L FL ++ S +G+ G V G+M F+ +A + ++ PGI E+LI+ +GL
Sbjct: 130 QSLPFLATVGSVSPYIGLFGTVWGIMNSFRGLAQAQQATLATVAPGIAEALIATAIGLFA 189
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ IAYN+F S+ + FA+EF AIL R+
Sbjct: 190 AIPAVIAYNRFAATSETLIGRYYTFADEFQAILHRKVH 227
>gi|294140558|ref|YP_003556536.1| MotA/TolQ/ExbB proton channel family protein [Shewanella violacea
DSS12]
gi|293327027|dbj|BAJ01758.1| MotA/TolQ/ExbB proton channel family protein [Shewanella violacea
DSS12]
Length = 229
Score = 242 bits (617), Expect = 4e-62, Method: Composition-based stats.
Identities = 73/219 (33%), Positives = 115/219 (52%), Gaps = 3/219 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
DISI LF+Q L VK ++ L S++SW+VI Q+ T ++ +FE FWSG L
Sbjct: 4 DISIIGLFLQASLLVKFVMLTLLSLSVMSWAVIFQRHRLLNTAKKNALKFEDQFWSGVDL 63
Query: 70 ETVCKSL--KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ K L + N GL +F + E+ + ++ P + D R M V+++RE+E+
Sbjct: 64 NKLYKELSARQDSNTGLEILFHTGFKEYTRLSKLNSKVPGAVMDGSYRAMRVSLSREMEK 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ L L ++ S +G+ G V G+M F ++ + + + PGI E+LI+ +GL
Sbjct: 124 LETHLPLLATIGSTSPYIGLFGTVWGIMNSFIALGAVQNATLAMVAPGIAEALIATAMGL 183
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ IAYN+F M F EFS+IL RQ
Sbjct: 184 FAAIPAVIAYNRFTTQVDSVEMSYANFMEEFSSILHRQA 222
>gi|153000264|ref|YP_001365945.1| Tol-Pal system TolQ [Shewanella baltica OS185]
gi|160874897|ref|YP_001554213.1| protein TolQ [Shewanella baltica OS195]
gi|217973707|ref|YP_002358458.1| protein TolQ [Shewanella baltica OS223]
gi|304409841|ref|ZP_07391461.1| protein TolQ [Shewanella baltica OS183]
gi|307304197|ref|ZP_07583950.1| protein TolQ [Shewanella baltica BA175]
gi|151364882|gb|ABS07882.1| Tol-Pal system TolQ [Shewanella baltica OS185]
gi|160860419|gb|ABX48953.1| protein TolQ [Shewanella baltica OS195]
gi|217498842|gb|ACK47035.1| protein TolQ [Shewanella baltica OS223]
gi|304352359|gb|EFM16757.1| protein TolQ [Shewanella baltica OS183]
gi|306913095|gb|EFN43518.1| protein TolQ [Shewanella baltica BA175]
gi|315267134|gb|ADT93987.1| protein TolQ [Shewanella baltica OS678]
Length = 228
Score = 242 bits (617), Expect = 5e-62, Method: Composition-based stats.
Identities = 73/218 (33%), Positives = 117/218 (53%), Gaps = 2/218 (0%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+SI LF+Q L VK ++ L S++SW+VI+Q+ + + + +FE FWSG L
Sbjct: 4 DMSIVGLFLQASLLVKFVMFTLLCLSVMSWTVILQRRSLLTSAKSKSAKFEDKFWSGVDL 63
Query: 70 ETVCKSLKNHH-NIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ K L N GL ++F++ E+ + ++ P + D R M V ++RE+E++
Sbjct: 64 NRLYKELSTRPDNSGLESLFVTGFKEYSRLNKLNSKVPDAVMDGTSRAMRVTLSREMEKL 123
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLC 187
L L ++ S +G+ G V G+M F +I + + + PGI E+LI+ +GL
Sbjct: 124 EANLPLLATIGSTSPYIGLFGTVWGIMNSFIAIGSMENATLAMVAPGIAEALIATAMGLF 183
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ IAYN+F K M F EFS+IL RQ
Sbjct: 184 AAIPAVIAYNRFSTQVDKLEMAYANFMEEFSSILHRQA 221
>gi|319406259|emb|CBI79896.1| tolQ protein [Bartonella sp. AR 15-3]
Length = 237
Score = 241 bits (616), Expect = 5e-62, Method: Composition-based stats.
Identities = 87/221 (39%), Positives = 139/221 (62%), Gaps = 1/221 (0%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
I I +LFMQ VK ++ L SI SW++I K +++ +RR FE+ FWSGQSLE
Sbjct: 12 IGILSLFMQANWIVKAVMIGLIFASIWSWAIIFDKFISYRRIRRNIHHFERNFWSGQSLE 71
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
+ + + N ++ +F++AM+EWKKS KG+ + + +Q RID+ MD+ + RE +I
Sbjct: 72 DLYATYNSQRNNSISIVFLAAMAEWKKSLSKGSPTSLNLQSRIDKAMDLTLGRESVKIES 131
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVS 189
+L FL ++ SAG +G+ G V+G+M F SI+ + ++ + PGI E+L++ +GL +
Sbjct: 132 RLGFLATLGSAGPFIGLFGTVVGIMNSFLSISASQNTSLAIVAPGIAEALLATAIGLFAA 191
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
IP+ IAYNK +S + ++E FA+EFS ILSR+ + S
Sbjct: 192 IPAVIAYNKLTSESAQIIAKIENFADEFSTILSRRIDETTS 232
>gi|322833834|ref|YP_004213861.1| protein TolQ [Rahnella sp. Y9602]
gi|321169035|gb|ADW74734.1| protein TolQ [Rahnella sp. Y9602]
Length = 229
Score = 241 bits (616), Expect = 5e-62, Method: Composition-based stats.
Identities = 68/221 (30%), Positives = 112/221 (50%), Gaps = 3/221 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
+ D++I LF++ + VK I+ +L FSI SW++IIQ++ R+ FE FWSG
Sbjct: 1 MTDMNILDLFLKASILVKLIMLVLVCFSIASWAIIIQRTKVLNAATREAEAFEDKFWSGI 60
Query: 68 SLETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
L + + + G IF S E+ + + +P + + R M ++ REL
Sbjct: 61 ELSRLYQESQGRRETLSGAEQIFHSGFKEFARLHRANSHAPEAVIEGSSRAMRISFNREL 120
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILL 184
E + + FLG++ S +G+ G V G+M F + + + PGI E+LI+ +
Sbjct: 121 ESLETHIPFLGTVGSISPYIGLFGTVWGIMHAFIGLGSVKQATLQMVAPGIAEALIATAI 180
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
GL +IP+ +AYN+ + K + F EF+AIL RQ
Sbjct: 181 GLFAAIPAVMAYNRLNQRVNKLEQNYDNFMEEFTAILHRQA 221
>gi|254465478|ref|ZP_05078889.1| protein TolQ [Rhodobacterales bacterium Y4I]
gi|206686386|gb|EDZ46868.1| protein TolQ [Rhodobacterales bacterium Y4I]
Length = 231
Score = 241 bits (616), Expect = 5e-62, Method: Composition-based stats.
Identities = 85/219 (38%), Positives = 125/219 (57%), Gaps = 1/219 (0%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
+D S++ LF + + VK ++ +L SI SW +IIQK +N+ R++ F++ FWSG
Sbjct: 12 IDFSMWGLFARATVTVKLVMLMLVGASIWSWGIIIQKMINYRKARQEADAFDRAFWSGNP 71
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
L+T+ + A IF + M+EW++S G Q RIDR MDVAIA+E E +
Sbjct: 72 LDTLFDQIGAEPPGQAARIFSAGMTEWRRSHRSDGGLIPGAQARIDRSMDVAIAKETEGL 131
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
LS L ++ S VG+ G V G+M F IA + N+ V PGI E+L++ LGL
Sbjct: 132 QSGLSVLATVGSTAPFVGLFGTVWGIMTAFIEIAEQQNTNLAVVAPGIAEALMATGLGLL 191
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ + YNK DS + E FA+EF+ ILSRQ +
Sbjct: 192 AAIPAVVFYNKLSADSDRIIGGYEAFADEFATILSRQLD 230
>gi|260912910|ref|ZP_05919395.1| TolQ colicin import protein [Pasteurella dagmatis ATCC 43325]
gi|260632900|gb|EEX51066.1| TolQ colicin import protein [Pasteurella dagmatis ATCC 43325]
Length = 229
Score = 241 bits (616), Expect = 5e-62, Method: Composition-based stats.
Identities = 70/224 (31%), Positives = 119/224 (53%), Gaps = 3/224 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D++ LF++ + V+ +I +L IFSI+SW++IIQ+S + FE FWSG+ L
Sbjct: 4 DLNFLELFLKASIVVQLVIVILLIFSIMSWAIIIQRSRVLTRALKDSAAFEDRFWSGEDL 63
Query: 70 ETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + L+N + G IF E+ + +P I R M++A+ RE+E+
Sbjct: 64 NRLYEGLENRRDGLSGSEQIFYVGFKEFSRLKQANPDAPESIIQGSTRAMNLAMNREVED 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
+ ++ FL +++S +G+ G V G+M F +++G + + PGI E+LI+ +GL
Sbjct: 124 LETRVPFLATVASISPYIGLFGTVWGIMHAFMALSGAKQATLQMVAPGIAEALIATAIGL 183
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
+IP+ +AYN+ K F +EF+ IL RQ G S
Sbjct: 184 FAAIPAVMAYNRLSLRVNKLEQNYGNFIDEFTTILHRQVFGRNS 227
>gi|260772524|ref|ZP_05881440.1| MotA/TolQ/ExbB proton channel family protein [Vibrio metschnikovii
CIP 69.14]
gi|260611663|gb|EEX36866.1| MotA/TolQ/ExbB proton channel family protein [Vibrio metschnikovii
CIP 69.14]
Length = 227
Score = 241 bits (616), Expect = 5e-62, Method: Composition-based stats.
Identities = 74/219 (33%), Positives = 114/219 (52%), Gaps = 3/219 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
DIS+ LF+Q L VK ++ +L S+ SW+VII++ RQ EFE FWSG L
Sbjct: 4 DISMLDLFLQASLLVKLVMLILLAMSVASWAVIIKRHKALAQAERQAEEFEDKFWSGTDL 63
Query: 70 ETVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + +K + G IF S +E+ + A +P I + R M V +ARE++E
Sbjct: 64 SILYQEVKKRKDTLEGTEEIFYSGFTEFARLHKSNANAPDYIMEGTGRTMRVTVAREVDE 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ L FL ++ S +G+ G V G+M F ++ + + PGI E+L++ +GL
Sbjct: 124 LEAHLPFLATVGSITPYIGLFGTVWGIMHAFIALGAVKQATLAMVAPGIAEALVATAMGL 183
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ IAYN+F K F+ EF +IL RQ
Sbjct: 184 FAAIPAVIAYNRFSSKVTKLEHIYATFSEEFHSILHRQA 222
>gi|146338266|ref|YP_001203314.1| TolQ protein [Bradyrhizobium sp. ORS278]
gi|146191072|emb|CAL75077.1| TolQ protein [Bradyrhizobium sp. ORS278]
Length = 234
Score = 241 bits (616), Expect = 6e-62, Method: Composition-based stats.
Identities = 93/219 (42%), Positives = 136/219 (62%), Gaps = 1/219 (0%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+S+ LF G V+ I+ L SI W++ I K F RR FEQ FWSG+S+E
Sbjct: 15 LSLIELFANAGWVVRIIMLGLISCSIWVWAIAIDKMFLFSRTRRSMDRFEQAFWSGESIE 74
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
+ + L +AA F++AM EWK+S + ARS G+Q RI+++M+V+IARE+E +
Sbjct: 75 ELYRVLSAKPTQSMAACFVAAMREWKRSFEGHARSFAGLQMRIEKVMNVSIAREVERLER 134
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVS 189
+L L ++ SAG VG+ G V G+M FQSIA + ++ V PGI E+L + +GL +
Sbjct: 135 RLLVLATVGSAGPFVGLFGTVWGIMTSFQSIAASKNTSLAVVAPGIAEALFATAIGLIAA 194
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
IP++I YNKF + + A ++EGFA+EFSAILSRQ +
Sbjct: 195 IPATIFYNKFSSEVNRQAQRLEGFADEFSAILSRQIDER 233
>gi|261252507|ref|ZP_05945080.1| MotA/TolQ/ExbB proton channel family protein [Vibrio orientalis CIP
102891]
gi|260935898|gb|EEX91887.1| MotA/TolQ/ExbB proton channel family protein [Vibrio orientalis CIP
102891]
Length = 232
Score = 241 bits (615), Expect = 7e-62, Method: Composition-based stats.
Identities = 73/219 (33%), Positives = 115/219 (52%), Gaps = 3/219 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
DIS+ LF+Q L VK ++ +L SI+SW++II++S + FE FWSG L
Sbjct: 4 DISMLDLFLQASLLVKMVMLILLGMSIVSWAMIIKRSKVLSQASKDAEAFEDKFWSGTDL 63
Query: 70 ETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ ++ K + G IF S +E+ + A SP I + R M VA+ARE++E
Sbjct: 64 SVLYQNAKKRKDDLAGTEEIFYSGFTEFARLRKSNADSPDFIMEGTGRSMRVAVAREVDE 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ L FL ++ S +G+ G V G+M F ++ + + PGI E+L++ +GL
Sbjct: 124 LETNLPFLATVGSISPYIGLFGTVWGIMHAFIALGEVKQATLAMVAPGIAEALVATAMGL 183
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ +AYN+F K F+ EF +IL RQ
Sbjct: 184 FAAIPAVMAYNRFSSKVGKLEHNYATFSEEFHSILHRQA 222
>gi|260900757|ref|ZP_05909152.1| protein TolQ [Vibrio parahaemolyticus AQ4037]
gi|308110199|gb|EFO47739.1| protein TolQ [Vibrio parahaemolyticus AQ4037]
gi|328473196|gb|EGF44044.1| TolQ protein [Vibrio parahaemolyticus 10329]
Length = 232
Score = 241 bits (615), Expect = 7e-62, Method: Composition-based stats.
Identities = 73/219 (33%), Positives = 113/219 (51%), Gaps = 3/219 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
DISI LF+Q L VK ++ L SI SW++II++S + +FE FWSG L
Sbjct: 4 DISILDLFLQASLLVKLVMLTLLGMSIASWAMIIKRSKVLSQASKNAEQFEDKFWSGTDL 63
Query: 70 ETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + +K + G IF + +E+ + A SP I + R M VA+ARE++E
Sbjct: 64 SQLYQKVKGRKDEIAGTEEIFYAGFTEFARLRKSNANSPAYIMEGTGRAMRVAVAREVDE 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
+ L FL ++ S +G+ G V G+M F ++ + + PGI E+LI+ +GL
Sbjct: 124 LETSLPFLATVGSISPYIGLFGTVWGIMHAFIALGEVKQATLSMVAPGIAEALIATAMGL 183
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ +AYN+ K F+ EF +IL RQ
Sbjct: 184 FAAIPAVMAYNRLSNKVSKLEHTYATFSEEFHSILHRQA 222
>gi|260576648|ref|ZP_05844635.1| protein TolQ [Rhodobacter sp. SW2]
gi|259021133|gb|EEW24442.1| protein TolQ [Rhodobacter sp. SW2]
Length = 231
Score = 241 bits (615), Expect = 7e-62, Method: Composition-based stats.
Identities = 82/231 (35%), Positives = 131/231 (56%), Gaps = 4/231 (1%)
Query: 1 MNNYGLAI---MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFR 57
M+ LA+ +D S+ ALF++ VK ++ +L S SW++II+K +++ + +
Sbjct: 1 MDTTPLAMAQEIDFSLLALFLKATFTVKIVMIMLLSMSFWSWAIIIRKHIDYRKAKAEAG 60
Query: 58 EFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMM 117
F++ FWSG+ L+ + + + IF S M EW++S + G Q RIDR M
Sbjct: 61 VFDRAFWSGEPLDELFEKIGAQPMGASERIFSSGMLEWRRSHRQDGGLIAGAQARIDRSM 120
Query: 118 DVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGII 176
DVAIA+E E + + LSFL ++ S +G+ G V G+ F+ IA + N+ V PGI
Sbjct: 121 DVAIAKESESLNKGLSFLATVGSTAPFIGLFGTVWGIKHAFEQIAISQNTNLAVVAPGIA 180
Query: 177 ESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEG 227
E+L++ +GL +IP+ + YNK DS+ E FA+EF+ ILSRQ +
Sbjct: 181 EALLATAIGLVAAIPAVVFYNKLNSDSEHIIGGYEAFADEFATILSRQLDA 231
>gi|261822333|ref|YP_003260439.1| colicin uptake protein TolQ [Pectobacterium wasabiae WPP163]
gi|261606346|gb|ACX88832.1| protein TolQ [Pectobacterium wasabiae WPP163]
Length = 228
Score = 241 bits (615), Expect = 7e-62, Method: Composition-based stats.
Identities = 69/221 (31%), Positives = 114/221 (51%), Gaps = 3/221 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
+ D+++F LF++ L VK I+ +L FSI SW++IIQ++ R+ FE FWSG
Sbjct: 1 MTDMNVFDLFLKASLLVKLIMLILICFSIASWAIIIQRTRILNAATREAEAFEDKFWSGI 60
Query: 68 SLETVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
L + + + + G IF S E+ + + P + + R M +++ REL
Sbjct: 61 ELSRLYQESQTRRDSLTGTEQIFHSGFKEFARLHRVNSHVPEAVVEGASRAMRISMNREL 120
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILL 184
E + + FLG++ S +G+ G V G+M F ++ + + PGI E+LI+ +
Sbjct: 121 ETLETHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMVAPGIAEALIATAI 180
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
GL +IP+ +AYN+ + K + F EF AIL RQ
Sbjct: 181 GLFAAIPAVMAYNRLNQRVGKLEQNYDNFTEEFIAILHRQA 221
>gi|294085863|ref|YP_003552623.1| Biopolymer transport protein [Candidatus Puniceispirillum marinum
IMCC1322]
gi|292665438|gb|ADE40539.1| Biopolymer transport protein [Candidatus Puniceispirillum marinum
IMCC1322]
Length = 241
Score = 241 bits (615), Expect = 8e-62, Method: Composition-based stats.
Identities = 82/237 (34%), Positives = 132/237 (55%), Gaps = 11/237 (4%)
Query: 1 MNNYGL----AIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQF 56
MN+ L + D+S + LF+ VK ++ LL + SI W++II+K + RR
Sbjct: 1 MNSADLTVTSSASDLSTWGLFLAADPLVKFVMLLLVLASIWCWAIIIEKISSVRRERRFA 60
Query: 57 REFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSP------IGIQ 110
++FE FW+G SL+ + ++ +F++AM EW+++ +G S +
Sbjct: 61 QQFEDAFWAGGSLDQLYDDTGPDAEGSMSKVFVAAMREWRRASARGLASSTRSDLRASLV 120
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV- 169
RI+R M+ I RE+E + ++FL S+ S VG+ G V G+M FQSIA + ++
Sbjct: 121 SRIERSMNFTITREMERLERGMNFLASIGSVSPFVGLFGTVWGIMSSFQSIAESKNTSLA 180
Query: 170 VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
V PGI E+L + LGL +IP+ AYNKF D ++ + ++E FA EFS +L RQ +
Sbjct: 181 VVAPGIAEALFATALGLAAAIPAVTAYNKFAGDLERHSARLETFAQEFSTLLGRQLD 237
>gi|37525404|ref|NP_928748.1| colicin uptake protein TolQ [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|36784832|emb|CAE13745.1| TolQ protein [Photorhabdus luminescens subsp. laumondii TTO1]
Length = 231
Score = 240 bits (614), Expect = 8e-62, Method: Composition-based stats.
Identities = 69/221 (31%), Positives = 114/221 (51%), Gaps = 3/221 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
+ D++I LF++ GL V+ I+ +L FS+ SW++IIQ++ R+ FE FWSG
Sbjct: 1 MTDMNILDLFLKAGLLVQLIMLILICFSVASWAIIIQRTKILNAATRESEAFEDKFWSGI 60
Query: 68 SLETVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
L + K ++ + G IF S E+ + +P + R M +++ REL
Sbjct: 61 ELSRLYKESQSRRDSLGGTEQIFYSGFKEFARLHHANNHAPEAVITGASRAMRISMNREL 120
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILL 184
E + + FLG++ S +G+ G V G+M F ++ + + PGI E+LI+ +
Sbjct: 121 ESLESHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMVAPGIAEALIATAI 180
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
GL +IP+ +AYN+ + K + F EF AIL RQ
Sbjct: 181 GLFAAIPAVMAYNRLNQRVNKLEQNYDNFMEEFLAILHRQA 221
>gi|70732086|ref|YP_261842.1| tolQ protein [Pseudomonas fluorescens Pf-5]
gi|68346385|gb|AAY93991.1| tolQ protein [Pseudomonas fluorescens Pf-5]
Length = 231
Score = 240 bits (614), Expect = 8e-62, Method: Composition-based stats.
Identities = 66/218 (30%), Positives = 114/218 (52%), Gaps = 3/218 (1%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLET 71
S+++L + V+ ++ L S+ SW +I Q+S RR FE+ FWSG L
Sbjct: 10 SMWSLVSNASVVVQLVMLTLVAASVTSWIMIFQRSNLLRAGRRALESFEERFWSGIDLSK 69
Query: 72 VCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+ + ++ + G+ IF + E+ + + P + + + R M VAI+RE E++
Sbjct: 70 LYRQAGSNPDPDSGVEQIFRAGFKEFSRLRQQPGVDPEAVMEGVARAMRVAISREEEKLE 129
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCV 188
+ L FL ++ S +G+ G V G+M F+ +A + ++ PGI E+LI+ +GL
Sbjct: 130 QSLPFLATVGSVSPYIGLFGTVWGIMNSFRGLAQAQQATLATVAPGIAEALIATAIGLFA 189
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ IAYN+F + + FA+EF AIL R+
Sbjct: 190 AIPAVIAYNRFAARGETLISRYYTFADEFQAILHRKVH 227
>gi|113970706|ref|YP_734499.1| MotA/TolQ/ExbB proton channel [Shewanella sp. MR-4]
gi|113885390|gb|ABI39442.1| MotA/TolQ/ExbB proton channel [Shewanella sp. MR-4]
Length = 228
Score = 240 bits (614), Expect = 8e-62, Method: Composition-based stats.
Identities = 73/218 (33%), Positives = 117/218 (53%), Gaps = 2/218 (0%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+SI LF+Q L VK ++ L S++SW+VI+Q+ + + + +FE FWSG L
Sbjct: 4 DMSIVGLFLQASLLVKFVMFTLLCLSVMSWTVILQRRSLLTSAKSKSAKFEDKFWSGVDL 63
Query: 70 ETVCKSLKNHH-NIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ K L N GL ++F++ E+ + + P + D R M V ++RELE++
Sbjct: 64 NRLYKELSARPDNTGLESLFVTGFKEYSRLNKLNNKVPDAVMDGTSRAMRVTLSRELEKL 123
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLC 187
L L ++ S +G+ G V G+M F +I + + + PGI E+LI+ +GL
Sbjct: 124 EANLPLLATIGSTSPYIGLFGTVWGIMNSFIAIGSMENATLAMVAPGIAEALIATAMGLF 183
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ IAYN+F +K + F EFS+IL RQ
Sbjct: 184 AAIPAVIAYNRFATQVEKLEIGYANFMEEFSSILHRQA 221
>gi|254452911|ref|ZP_05066348.1| protein TolQ [Octadecabacter antarcticus 238]
gi|198267317|gb|EDY91587.1| protein TolQ [Octadecabacter antarcticus 238]
Length = 216
Score = 240 bits (614), Expect = 8e-62, Method: Composition-based stats.
Identities = 78/215 (36%), Positives = 121/215 (56%), Gaps = 1/215 (0%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
++ +F + V+ ++ LL I S+ W+VI+ K V + R + R F++ FWSG L+ +
Sbjct: 1 MWGMFAHATIPVQFVMILLIIASVWCWAVIVDKWVQYRKARAEARVFDEAFWSGNPLDEL 60
Query: 73 CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKL 132
+ IF + M EW++S + G RIDR MDVAIA+E E + L
Sbjct: 61 FDRIGATPKGPSEKIFAAGMLEWRRSHRQDGGLIAGATARIDRSMDVAIAKETERLQRGL 120
Query: 133 SFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIP 191
+ L ++ S+ +G+LG V+G+M F IA + N+ V PGI E+L++ LGL +IP
Sbjct: 121 TVLATVGSSAPFIGLLGTVMGIMNAFIEIAEQQNTNLAVVAPGIAEALLATGLGLMAAIP 180
Query: 192 SSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+ I YNKF D+ + E FA+EF+ ILSRQ +
Sbjct: 181 AVIYYNKFSADADRVVSGYEAFADEFATILSRQLD 215
>gi|26987954|ref|NP_743379.1| biopolymer transport protein TolQ [Pseudomonas putida KT2440]
gi|148546491|ref|YP_001266593.1| Tol-Pal system, TolQ [Pseudomonas putida F1]
gi|167035192|ref|YP_001670423.1| protein TolQ [Pseudomonas putida GB-1]
gi|170723157|ref|YP_001750845.1| protein TolQ [Pseudomonas putida W619]
gi|24982667|gb|AAN66843.1|AE016313_2 biopolymer transport protein TolQ [Pseudomonas putida KT2440]
gi|5514776|emb|CAB50778.1| TolQ protein [Pseudomonas putida]
gi|148510549|gb|ABQ77409.1| Tol-Pal system, TolQ [Pseudomonas putida F1]
gi|166861680|gb|ABZ00088.1| protein TolQ [Pseudomonas putida GB-1]
gi|169761160|gb|ACA74476.1| protein TolQ [Pseudomonas putida W619]
gi|313497570|gb|ADR58936.1| TolQ [Pseudomonas putida BIRD-1]
Length = 231
Score = 240 bits (614), Expect = 8e-62, Method: Composition-based stats.
Identities = 66/218 (30%), Positives = 115/218 (52%), Gaps = 3/218 (1%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLET 71
S+++L + V+ ++ L S+ SW +I Q+S RR FE+ FWSG L
Sbjct: 10 SMWSLVSNASVVVQLVMLTLVAASVTSWIMIFQRSTMLRAGRRALDAFEERFWSGIDLSK 69
Query: 72 VCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+ + ++ + G+ +F + E+ + + P + + + R M VAI+RE E++
Sbjct: 70 LYRQAGSNPDPDSGVEQVFRAGFKEFSRLRQQPGVDPDAVMEGVGRAMRVAISREEEKLE 129
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCV 188
+ L FL ++ S +G+ G V G+M F+ +A + ++ PGI E+LI+ +GL
Sbjct: 130 QSLPFLATVGSTSPYIGLFGTVWGIMNSFRGLASAQQATLATVAPGIAEALIATAIGLFA 189
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ IAYN+F S+ + FA+EF AIL R+
Sbjct: 190 AIPAVIAYNRFAARSEVLIGRYYTFADEFQAILHRKVH 227
>gi|254487877|ref|ZP_05101082.1| protein TolQ [Roseobacter sp. GAI101]
gi|214044746|gb|EEB85384.1| protein TolQ [Roseobacter sp. GAI101]
Length = 231
Score = 240 bits (614), Expect = 8e-62, Method: Composition-based stats.
Identities = 79/219 (36%), Positives = 123/219 (56%), Gaps = 1/219 (0%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
+D S+ LF++ VK ++ L + S SWS+I+QK + + + + F+Q FWSG+
Sbjct: 12 IDFSLLGLFLRATFTVKLVMISLIVASFWSWSIIVQKILQYRRAKAEAERFDQAFWSGEP 71
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
L+ + S+ IF + M+EW++S + G RIDR MDVAIA+E E++
Sbjct: 72 LDGLYDSIGPDPEGAADKIFAAGMTEWRRSHREDGGLIPGATARIDRSMDVAIAKESEKL 131
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLC 187
+ L L + S VG+ G V G+M F IA + ++V + PGI E+L++ +GL
Sbjct: 132 QKGLPVLATTGSTAPFVGLFGTVFGIMHSFIEIAAQQNTSLVVVAPGIAEALLATGIGLL 191
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ I YNK DS + E FA+EF+ ILSRQ +
Sbjct: 192 AAIPAVIFYNKLSADSDRILGGYEAFADEFATILSRQLD 230
>gi|83943915|ref|ZP_00956372.1| proton transporter TolQ [Sulfitobacter sp. EE-36]
gi|83954488|ref|ZP_00963199.1| proton transporter TolQ [Sulfitobacter sp. NAS-14.1]
gi|83840772|gb|EAP79943.1| proton transporter TolQ [Sulfitobacter sp. NAS-14.1]
gi|83845162|gb|EAP83042.1| proton transporter TolQ [Sulfitobacter sp. EE-36]
Length = 231
Score = 240 bits (614), Expect = 8e-62, Method: Composition-based stats.
Identities = 81/230 (35%), Positives = 128/230 (55%), Gaps = 4/230 (1%)
Query: 1 MNNYGLAI---MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFR 57
M LA +D S+ LF++ + VK ++ +L + S SWS+IIQK + + + +
Sbjct: 1 MEAETLAAASEIDFSLLGLFLRATITVKLVMIMLIVASFWSWSIIIQKMIQYRHAKAEAE 60
Query: 58 EFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMM 117
F+Q FWSG+ L+ + ++ + IF + M+EW++S + G RIDR M
Sbjct: 61 RFDQAFWSGEPLDGLYDTIGPDPDGAAEKIFAAGMTEWRRSHREDGGLIPGATARIDRSM 120
Query: 118 DVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGII 176
DVAIA+E E + + L L + S +G+ G V G+M F IA + ++V + PGI
Sbjct: 121 DVAIAKEAERLQKGLPVLATTGSTAPFIGLFGTVFGIMNSFIEIAAQQNTSLVVVAPGIA 180
Query: 177 ESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
E+L++ +GL +IP+ I YNK DS + E FA+EF+ ILSRQ +
Sbjct: 181 EALLATGIGLLAAIPAVIFYNKLSADSDRILGGYEAFADEFATILSRQLD 230
>gi|330811390|ref|YP_004355852.1| Proton channel family protein [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327379498|gb|AEA70848.1| Proton channel family protein [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
Length = 231
Score = 240 bits (614), Expect = 9e-62, Method: Composition-based stats.
Identities = 67/218 (30%), Positives = 117/218 (53%), Gaps = 3/218 (1%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLET 71
S+++L + V+ ++ +L S+ SW +I Q+S RR FE+ FWSG L
Sbjct: 10 SMWSLVSNASVVVQLVMLILVAASVTSWIMIFQRSNMLRAGRRALESFEERFWSGIDLSK 69
Query: 72 VCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+ + ++ + G+ IF + E+ + + P + + + R M VAI+RE E++
Sbjct: 70 LYRQAGSNPDPDSGVEQIFRAGFKEFSRLRQQPGVDPEAVMEGVARAMRVAISREEEKLE 129
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCV 188
+ LSFL ++ S +G+ G V G+M F+ +A + ++ PGI E+L++ +GL
Sbjct: 130 QGLSFLATVGSVSPYIGLFGTVWGIMNSFRGLASAQQATLATVAPGIAEALVATAIGLFA 189
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ IAYN+F S+ + FA+EF AIL R+
Sbjct: 190 AIPAVIAYNRFAARSEALTSRYYTFADEFQAILHRKVH 227
>gi|163796371|ref|ZP_02190332.1| Biopolymer transport protein [alpha proteobacterium BAL199]
gi|159178513|gb|EDP63055.1| Biopolymer transport protein [alpha proteobacterium BAL199]
Length = 243
Score = 240 bits (614), Expect = 9e-62, Method: Composition-based stats.
Identities = 87/221 (39%), Positives = 135/221 (61%), Gaps = 6/221 (2%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLET 71
+I+ LF+ VK ++ +L I S+ W++I K +LRR+ EFE+ FWSG SLE
Sbjct: 20 NIWDLFLAADPIVKGVMGMLLIASVFCWAIIFDKWFKVRSLRRRAVEFEEAFWSGGSLED 79
Query: 72 VCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARS-----PIGIQDRIDRMMDVAIARELE 126
+ + NH +AA+F SAM EW++S +G S ++ RID++M + I+RE+E
Sbjct: 80 LYDRMGNHPEDPMAAVFSSAMREWRRSAARGLTSKGTELRASLRHRIDQVMLLTISREME 139
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLG 185
+ ++++FL S+ S +G+ G V G+M FQSIA + ++ V PGI E+L + LG
Sbjct: 140 ALEKRMTFLASVGSTAPFIGLFGTVWGIMNSFQSIAASKNTSLAVVAPGIAEALFATALG 199
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
L +IP+ I YNK D ++A ++EGFA EF +ILSRQ +
Sbjct: 200 LVAAIPAVIFYNKISSDLGRYAARLEGFALEFGSILSRQLD 240
>gi|153832499|ref|ZP_01985166.1| protein TolQ [Vibrio harveyi HY01]
gi|156973897|ref|YP_001444804.1| hypothetical protein VIBHAR_01607 [Vibrio harveyi ATCC BAA-1116]
gi|148871294|gb|EDL70166.1| protein TolQ [Vibrio harveyi HY01]
gi|156525491|gb|ABU70577.1| hypothetical protein VIBHAR_01607 [Vibrio harveyi ATCC BAA-1116]
Length = 232
Score = 240 bits (614), Expect = 9e-62, Method: Composition-based stats.
Identities = 73/219 (33%), Positives = 112/219 (51%), Gaps = 3/219 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
DISI LF+Q L VK ++ L SI SW++II++S + FE FWSG L
Sbjct: 4 DISILDLFLQASLLVKLVMLTLLGMSIASWAMIIKRSKVLSQASKDAESFEDKFWSGTDL 63
Query: 70 ETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + +K + G IF + +E+ + A SP I + R M VA+ARE++E
Sbjct: 64 SQLYQKVKGRKDDITGTEEIFYAGFTEFARLRKSNANSPAYIMEGTGRAMRVAVAREVDE 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
+ L FL ++ S +G+ G V G+M F ++ + + PGI E+LI+ +GL
Sbjct: 124 LETSLPFLATVGSISPYIGLFGTVWGIMHAFIALGEVKQATLSMVAPGIAEALIATAMGL 183
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ +AYN+ K F+ EF +IL RQ
Sbjct: 184 FAAIPAVMAYNRLSNKVSKLEHTYATFSEEFHSILHRQA 222
>gi|114047935|ref|YP_738485.1| MotA/TolQ/ExbB proton channel [Shewanella sp. MR-7]
gi|117920975|ref|YP_870167.1| MotA/TolQ/ExbB proton channel [Shewanella sp. ANA-3]
gi|113889377|gb|ABI43428.1| MotA/TolQ/ExbB proton channel [Shewanella sp. MR-7]
gi|117613307|gb|ABK48761.1| MotA/TolQ/ExbB proton channel [Shewanella sp. ANA-3]
Length = 228
Score = 240 bits (614), Expect = 1e-61, Method: Composition-based stats.
Identities = 73/218 (33%), Positives = 118/218 (54%), Gaps = 2/218 (0%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+SI LF+Q L VK ++ L S++SW+VI+Q+ + + + +FE FWSG L
Sbjct: 4 DMSIVGLFLQASLLVKFVMFTLLCLSVMSWTVILQRRSLLTSAKSKSAKFEDKFWSGVDL 63
Query: 70 ETVCKSLKNHH-NIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ K L N GL ++F++ E+ + ++ P + D R M V ++RELE++
Sbjct: 64 NRLYKELSARPDNTGLESLFVTGFKEYSRLNKLNSKVPDAVMDGTSRAMRVTLSRELEKL 123
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLC 187
L L ++ S +G+ G V G+M F +I + + + PGI E+LI+ +GL
Sbjct: 124 EANLPLLATIGSTSPYIGLFGTVWGIMNSFIAIGSMENATLAMVAPGIAEALIATAMGLF 183
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ IAYN+F +K + F EFS+IL RQ
Sbjct: 184 AAIPAVIAYNRFATQVEKLEIGYANFMEEFSSILHRQA 221
>gi|260597136|ref|YP_003209707.1| colicin uptake protein TolQ [Cronobacter turicensis z3032]
gi|260216313|emb|CBA29295.1| Protein tolQ [Cronobacter turicensis z3032]
Length = 231
Score = 240 bits (613), Expect = 1e-61, Method: Composition-based stats.
Identities = 70/226 (30%), Positives = 117/226 (51%), Gaps = 3/226 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
+ D++I LF++ L VK I+ +L FSI SW++IIQ++ R+ FE FWSG
Sbjct: 1 MTDMNILDLFLKASLLVKLIMLILIGFSIASWAIIIQRTRILNAASREAEAFEDKFWSGI 60
Query: 68 SLETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
L + + + G IF + E+ + + +P I + R M +++ REL
Sbjct: 61 ELSRLYQESQGRRENLSGSEQIFYAGFKEFARLHRANSHAPEAIVEGASRAMRISMNREL 120
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILL 184
E + + FLG++ S +G+ G V G+M F ++ + + PGI E+LI+ +
Sbjct: 121 ETLETHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMVAPGIAEALIATAI 180
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
GL +IP+ +AYN+ + K + + F EF+AIL RQ + S
Sbjct: 181 GLFAAIPAVMAYNRLNQRVNKLELNYDNFMEEFTAILHRQAFTSTS 226
>gi|127512453|ref|YP_001093650.1| MotA/TolQ/ExbB proton channel [Shewanella loihica PV-4]
gi|126637748|gb|ABO23391.1| MotA/TolQ/ExbB proton channel [Shewanella loihica PV-4]
Length = 229
Score = 240 bits (613), Expect = 1e-61, Method: Composition-based stats.
Identities = 76/219 (34%), Positives = 119/219 (54%), Gaps = 3/219 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
DIS LF+Q L VK ++ L S++SW+VIIQ+ + R++ +FE FWSG L
Sbjct: 4 DISFIGLFLQASLLVKFVMLTLLALSVVSWAVIIQRRRLLTSARQRSLKFEDKFWSGVDL 63
Query: 70 ETVCKSL--KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ K L + N GL A+F + E+ + + + P + D R M V+++RELE+
Sbjct: 64 NKLYKELSARQESNTGLEAMFYAGFKEYARLSNLNGKVPAAVMDGCYRAMRVSLSRELEK 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ L L ++ S +G+ G V G+M F ++ + + + PGI E+LI+ +GL
Sbjct: 124 LETHLPLLATIGSTSPYIGLFGTVWGIMNSFIALGAVENATLAMVAPGIAEALIATAMGL 183
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ IAYN+F +K M F EFS+IL RQ
Sbjct: 184 FAAIPAVIAYNRFSTQVEKIEMSYANFMEEFSSILHRQA 222
>gi|163751260|ref|ZP_02158488.1| MotA/TolQ/ExbB proton channel family protein [Shewanella benthica
KT99]
gi|161328974|gb|EDQ00048.1| MotA/TolQ/ExbB proton channel family protein [Shewanella benthica
KT99]
Length = 229
Score = 240 bits (613), Expect = 1e-61, Method: Composition-based stats.
Identities = 72/219 (32%), Positives = 115/219 (52%), Gaps = 3/219 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
DISI LF+Q + VK ++ L S++SW+VIIQ+S ++ +FE FWSG L
Sbjct: 4 DISIIGLFLQASILVKFVMLTLLGLSVMSWAVIIQRSRLLSAAKKNVLKFEDKFWSGVDL 63
Query: 70 ETVCKSL--KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ K L + N GL +F + E+ + ++ P + + R M V+++RE+E+
Sbjct: 64 NKLYKELSVRQDSNTGLETLFHTGFKEYARLSKLNSKVPDAVMNGSYRAMRVSLSREMEK 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ L L ++ S +G+ G V G+M F +I + + + PGI E+LI+ +GL
Sbjct: 124 LETHLPLLATIGSTSPYIGLFGTVWGIMNSFIAIGAVENATLAMVAPGIAEALIATAMGL 183
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ I YN+F M F EFS+IL RQ
Sbjct: 184 FAAIPAVIGYNRFTTLVDSVEMSYANFMEEFSSILHRQA 222
>gi|300023933|ref|YP_003756544.1| protein TolQ [Hyphomicrobium denitrificans ATCC 51888]
gi|299525754|gb|ADJ24223.1| protein TolQ [Hyphomicrobium denitrificans ATCC 51888]
Length = 238
Score = 240 bits (613), Expect = 1e-61, Method: Composition-based stats.
Identities = 94/235 (40%), Positives = 143/235 (60%), Gaps = 9/235 (3%)
Query: 1 MNNYGLA--------IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITL 52
MN +A S LFMQ L VK ++T L + SI SW++I +K + F
Sbjct: 1 MNPADVAQGVVAPVNAAGFSFIELFMQASLVVKIVMTGLGLASIWSWAIIFEKLLAFRRA 60
Query: 53 RRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDR 112
R + +FEQ+FWSGQSL+ + +L I +AA+F++AM EWK+S + R+ GIQ R
Sbjct: 61 RVESDKFEQMFWSGQSLDELYANLSRGRTITMAALFVAAMREWKRSVEGNIRALGGIQLR 120
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VS 171
++++MDV I+RE+E + +L FL ++ S VG+ G V G+M FQSIA + ++ V
Sbjct: 121 VEKVMDVTISREMERLDRRLLFLATVGSTAPFVGLFGTVWGIMTSFQSIAVSKNTSLAVV 180
Query: 172 IPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
PGI E+L + LGL +IP+ + YNKF DS + ++ F++EF+AI+SRQ +
Sbjct: 181 APGIAEALFATALGLMAAIPAVVFYNKFSADSSAISQRLYAFSDEFAAIVSRQID 235
>gi|206580447|ref|YP_002239641.1| protein TolQ [Klebsiella pneumoniae 342]
gi|238893773|ref|YP_002918507.1| colicin uptake protein TolQ [Klebsiella pneumoniae NTUH-K2044]
gi|288936482|ref|YP_003440541.1| protein TolQ [Klebsiella variicola At-22]
gi|290510461|ref|ZP_06549831.1| TolQ [Klebsiella sp. 1_1_55]
gi|206569505|gb|ACI11281.1| protein TolQ [Klebsiella pneumoniae 342]
gi|238546089|dbj|BAH62440.1| inner membrane protein [Klebsiella pneumoniae subsp. pneumoniae
NTUH-K2044]
gi|288891191|gb|ADC59509.1| protein TolQ [Klebsiella variicola At-22]
gi|289777177|gb|EFD85175.1| TolQ [Klebsiella sp. 1_1_55]
Length = 230
Score = 240 bits (613), Expect = 1e-61, Method: Composition-based stats.
Identities = 70/221 (31%), Positives = 117/221 (52%), Gaps = 3/221 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
+ D++I LF++ L VK I+ +L FSI SW++IIQ++ + R+ FE FWSG
Sbjct: 1 MTDMNILDLFLKASLLVKLIMLILIGFSIASWAIIIQRTRILNSAAREAEAFEDKFWSGI 60
Query: 68 SLETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
L + + + + G IF S E+ + + +P I + R M +++ REL
Sbjct: 61 ELSRLYQESQGRRDNLTGSEQIFYSGFKEFARLHRANSHAPEAIVEGASRAMRISMNREL 120
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILL 184
E + + FLG++ S +G+ G V G+M F ++ + + PGI E+LI+ +
Sbjct: 121 ETLETHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMVAPGIAEALIATAI 180
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
GL +IP+ +AYN+ + K + + F EF+AIL RQ
Sbjct: 181 GLFAAIPAVMAYNRLNQRVNKLELNYDNFMEEFTAILHRQA 221
>gi|317047354|ref|YP_004115002.1| protein TolQ [Pantoea sp. At-9b]
gi|316948971|gb|ADU68446.1| protein TolQ [Pantoea sp. At-9b]
Length = 228
Score = 240 bits (613), Expect = 1e-61, Method: Composition-based stats.
Identities = 69/221 (31%), Positives = 115/221 (52%), Gaps = 3/221 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
+ D++I LF++ L VK I+ +L FSI SW++IIQ++ R+ FE FWSG
Sbjct: 1 MTDMNILDLFLKASLLVKLIMLILIGFSIASWAIIIQRTRILNAAGREAEAFEDKFWSGI 60
Query: 68 SLETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
L + + + + G IF S E+ + + +P + + R M +++ REL
Sbjct: 61 ELSRLYQESQGRRDELNGSEQIFYSGFKEFARLHRANSHAPEAVVEGASRAMRISMNREL 120
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILL 184
E + + FLG++ S +G+ G V G+M F ++ + + PGI E+LI+ +
Sbjct: 121 EALENHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMVAPGIAEALIATAI 180
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
GL +IP+ +AYN+ + K + F EF+AIL RQ
Sbjct: 181 GLFAAIPAVMAYNRLNQRVNKLEQGYDNFMEEFTAILHRQA 221
>gi|149192084|ref|ZP_01870308.1| TolQ protein [Vibrio shilonii AK1]
gi|148834070|gb|EDL51083.1| TolQ protein [Vibrio shilonii AK1]
Length = 228
Score = 240 bits (613), Expect = 1e-61, Method: Composition-based stats.
Identities = 69/219 (31%), Positives = 113/219 (51%), Gaps = 3/219 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
DIS L ++ L V+ ++ +L S++SW++II++S + EFE FWSG L
Sbjct: 4 DISFVDLILEASLLVQLVMLILLGMSVVSWAMIIKRSKVLKQATKDSDEFEDKFWSGADL 63
Query: 70 ETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + +K + G IF S +E+ + A SP I + R M VA++RE+E+
Sbjct: 64 SQIYQDVKKRKDDLSGTEEIFYSGFTEFLRLRKSNAESPAFIMEGTGRSMRVAVSREVED 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ L FL ++ S +G+ G V G+M F ++ + + PGI E+LI+ +GL
Sbjct: 124 LETNLPFLATVGSISPYIGLFGTVWGIMHAFIALGEVKQATLAMVAPGIAEALIATAMGL 183
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ +AYN+ K F+ EF +IL RQ
Sbjct: 184 FAAIPAVMAYNRLSNKVGKLEHNYATFSEEFHSILHRQA 222
>gi|163738346|ref|ZP_02145761.1| MotA/TolQ/ExbB proton channel [Phaeobacter gallaeciensis BS107]
gi|163742237|ref|ZP_02149625.1| proton transporter TolQ [Phaeobacter gallaeciensis 2.10]
gi|161384567|gb|EDQ08948.1| proton transporter TolQ [Phaeobacter gallaeciensis 2.10]
gi|161388267|gb|EDQ12621.1| MotA/TolQ/ExbB proton channel [Phaeobacter gallaeciensis BS107]
Length = 231
Score = 240 bits (613), Expect = 1e-61, Method: Composition-based stats.
Identities = 86/219 (39%), Positives = 127/219 (57%), Gaps = 1/219 (0%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
+D S++ LF + L VK ++ +L + SI SW++I+QK +N+ RR+ EF++ FWSG+
Sbjct: 12 IDFSMWGLFARATLTVKLVMLMLVVASIWSWAIILQKLINYRLARREAAEFDRAFWSGEP 71
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
L+ + + IF + M+EW++S G Q RI+R MDVAIA+E E +
Sbjct: 72 LDGLFDQIGPQPKGQSQRIFAAGMTEWRRSHRTDGALIAGAQARIERSMDVAIAKESEHV 131
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
LS L ++ S VG+ G V G+M F IA + N+ V PGI E+L++ LGL
Sbjct: 132 QSGLSILATVGSTAPFVGLFGTVWGIMTAFIEIAEQQNTNLAVVAPGIAEALMATGLGLL 191
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ I YNK DS + E FA+EFS ILSRQ +
Sbjct: 192 AAIPAVIFYNKLSADSDRIIGSYEAFADEFSTILSRQLD 230
>gi|104783070|ref|YP_609568.1| biopolymer transport protein TolQ [Pseudomonas entomophila L48]
gi|95112057|emb|CAK16784.1| biopolymer transport protein TolQ [Pseudomonas entomophila L48]
Length = 231
Score = 240 bits (612), Expect = 1e-61, Method: Composition-based stats.
Identities = 65/218 (29%), Positives = 115/218 (52%), Gaps = 3/218 (1%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLET 71
S+++L + V+ ++ L S+ SW +I Q+S RR FE+ FWSG L
Sbjct: 10 SMWSLVANASVVVQLVMLTLVAASVTSWIMIFQRSTMLRAGRRALDAFEERFWSGIDLSK 69
Query: 72 VCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+ + ++ + G+ +F + E+ + + P + + + R M VAI+RE E++
Sbjct: 70 LYRQAGSNPDPDSGVEQVFRAGFKEFSRLRQQPGVDPDAVMEGVGRAMRVAISREEEKLE 129
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCV 188
+ L FL ++ S +G+ G V G+M F+ +A + ++ PGI E+L++ +GL
Sbjct: 130 QSLPFLATVGSTSPYIGLFGTVWGIMNSFRGLASAQQATLATVAPGIAEALVATAIGLFA 189
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ IAYN+F S+ + FA+EF AIL R+
Sbjct: 190 AIPAVIAYNRFAARSEVLIGRYYTFADEFQAILHRKVH 227
>gi|52424775|ref|YP_087912.1| TolQ protein [Mannheimia succiniciproducens MBEL55E]
gi|52306827|gb|AAU37327.1| TolQ protein [Mannheimia succiniciproducens MBEL55E]
Length = 228
Score = 240 bits (612), Expect = 1e-61, Method: Composition-based stats.
Identities = 69/222 (31%), Positives = 118/222 (53%), Gaps = 3/222 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D++ F LF++ + V+ +I +L FS++SW++IIQ+S T + FE FWSG+ L
Sbjct: 4 DLNFFELFIKASIVVQIVILILIAFSVISWTIIIQRSRVLTTALKDSSAFEDRFWSGEDL 63
Query: 70 ETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + L N + G IF E+ + +P I + R M++ + RE+EE
Sbjct: 64 TKLYEGLSNRRDGLTGSEQIFYVGFKEFSRLKQANPEAPESIIEGSSRAMNLTMNREIEE 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
+ ++ FL +++S +G+ G V G+M F ++G + + PGI E+LI+ +GL
Sbjct: 124 LEGRIPFLATVASISPYIGLFGTVWGIMHAFMGLSGAKQATLQMVAPGIAEALIATAIGL 183
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
+IP+ +AYN+ K F +EF+ IL RQ G+
Sbjct: 184 FAAIPAVMAYNRLSLRLNKLEQNYGNFIDEFTTILHRQVFGS 225
>gi|242238599|ref|YP_002986780.1| colicin uptake protein TolQ [Dickeya dadantii Ech703]
gi|242130656|gb|ACS84958.1| protein TolQ [Dickeya dadantii Ech703]
Length = 228
Score = 240 bits (612), Expect = 1e-61, Method: Composition-based stats.
Identities = 69/221 (31%), Positives = 114/221 (51%), Gaps = 3/221 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
+ D++I LF++ L VK I+ +L FSI SW++IIQ++ R FE FWSG
Sbjct: 1 MTDMNILDLFLKASLLVKLIMLILIGFSIASWAIIIQRTRILNAATRDAEAFEDKFWSGI 60
Query: 68 SLETVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
L + + ++H G IF + E+ + + +P + + R M +++ REL
Sbjct: 61 ELSRLYQESQSHRETLGGTEQIFYAGFKEFARLHRANSHAPEAVVEGASRAMRISMNREL 120
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILL 184
E + + FLG++ S +G+ G V G+M F ++ + + PGI E+LI+ +
Sbjct: 121 ETLETHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMVAPGIAEALIATAI 180
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
GL +IP+ +AYN+ + K + F EF AIL RQ
Sbjct: 181 GLFAAIPAVMAYNRLNQRVNKLEQNYDNFMEEFIAILHRQA 221
>gi|94501017|ref|ZP_01307541.1| Biopolymer transport protein [Oceanobacter sp. RED65]
gi|94426764|gb|EAT11748.1| Biopolymer transport protein [Oceanobacter sp. RED65]
Length = 231
Score = 240 bits (612), Expect = 1e-61, Method: Composition-based stats.
Identities = 67/217 (30%), Positives = 106/217 (48%), Gaps = 3/217 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+SI++L V+ ++ +L +SW++IIQ+ ++ + +FE FWSG L
Sbjct: 5 MSIWSLIANASWVVQGVMLVLVAAVFISWTIIIQRHRLLTAVKDGYEDFEDRFWSGMDLS 64
Query: 71 TVCKSLKNHHNI-GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+ K + G+ IF + E+ + +G P I R M VA +E E +
Sbjct: 65 QLYKEINQEPPAFGVENIFAAGFREFSRLRQQGG-DPEAIIQGTQRAMRVATTKEAELLE 123
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCV 188
L FL ++ S VG+ G V G+M F+ +A + V PGI E+LI+ +GL
Sbjct: 124 NHLPFLATVGSTSPYVGLFGTVWGIMNSFRGLANVQQATLAVVAPGIAEALIATAIGLFA 183
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ I YN+F + E FA EF +IL RQ
Sbjct: 184 AIPAVIFYNRFTTKVDQITSHYETFAEEFISILHRQV 220
>gi|325274577|ref|ZP_08140635.1| protein TolQ [Pseudomonas sp. TJI-51]
gi|324100304|gb|EGB98092.1| protein TolQ [Pseudomonas sp. TJI-51]
Length = 231
Score = 240 bits (612), Expect = 2e-61, Method: Composition-based stats.
Identities = 65/218 (29%), Positives = 115/218 (52%), Gaps = 3/218 (1%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLET 71
S+++L + V+ ++ L S+ SW +I Q+S RR FE+ FWSG L
Sbjct: 10 SMWSLVSNASVVVQLVMLTLVAASVTSWIMIFQRSAMLRAGRRALDAFEERFWSGIDLSK 69
Query: 72 VCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+ + ++ + G+ +F + E+ + + P + + + R M VAI+RE E++
Sbjct: 70 LYRQAGSNPDPDSGVEQVFRAGFKEFSRLRQQPGVDPDAVMEGVGRAMRVAISREEEKLE 129
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCV 188
+ L FL ++ S +G+ G V G+M F+ +A + ++ PGI E+L++ +GL
Sbjct: 130 QSLPFLATVGSTSPYIGLFGTVWGIMNSFRGLASAQQATLATVAPGIAEALVATAIGLFA 189
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ IAYN+F S+ + FA+EF AIL R+
Sbjct: 190 AIPAVIAYNRFAARSEVLIGRYYTFADEFQAILHRKVH 227
>gi|28897831|ref|NP_797436.1| TolQ protein [Vibrio parahaemolyticus RIMD 2210633]
gi|260361762|ref|ZP_05774787.1| protein TolQ [Vibrio parahaemolyticus K5030]
gi|260876991|ref|ZP_05889346.1| protein TolQ [Vibrio parahaemolyticus AN-5034]
gi|260899062|ref|ZP_05907503.1| protein TolQ [Vibrio parahaemolyticus Peru-466]
gi|28806044|dbj|BAC59320.1| TolQ protein [Vibrio parahaemolyticus RIMD 2210633]
gi|308089139|gb|EFO38834.1| protein TolQ [Vibrio parahaemolyticus Peru-466]
gi|308093873|gb|EFO43568.1| protein TolQ [Vibrio parahaemolyticus AN-5034]
gi|308113252|gb|EFO50792.1| protein TolQ [Vibrio parahaemolyticus K5030]
Length = 232
Score = 240 bits (612), Expect = 2e-61, Method: Composition-based stats.
Identities = 73/219 (33%), Positives = 113/219 (51%), Gaps = 3/219 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
DISI LF+Q L VK ++ L SI SW++II++S + +FE FWSG L
Sbjct: 4 DISILDLFLQASLLVKLVMLTLLGMSIASWAMIIKRSKVLSQASKNAEQFEDKFWSGTDL 63
Query: 70 ETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + +K + G IF + +E+ + A SP I + R M VA+ARE++E
Sbjct: 64 SQLYQKVKGRKDEIAGTEEIFFAGFTEFARLRKSNANSPAYIMEGTGRAMRVAVAREVDE 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
+ L FL ++ S +G+ G V G+M F ++ + + PGI E+LI+ +GL
Sbjct: 124 LETSLPFLATVGSISPYIGLFGTVWGIMHAFIALGEVKQATLSMVAPGIAEALIATAMGL 183
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ +AYN+ K F+ EF +IL RQ
Sbjct: 184 FAAIPAVMAYNRLSNKVSKLEHTYATFSEEFHSILHRQA 222
>gi|126173972|ref|YP_001050121.1| MotA/TolQ/ExbB proton channel [Shewanella baltica OS155]
gi|125997177|gb|ABN61252.1| MotA/TolQ/ExbB proton channel [Shewanella baltica OS155]
Length = 228
Score = 240 bits (612), Expect = 2e-61, Method: Composition-based stats.
Identities = 72/218 (33%), Positives = 116/218 (53%), Gaps = 2/218 (0%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+SI LF+Q L VK ++ L S++SW+VI+Q+ + + + +FE FWSG L
Sbjct: 4 DMSIVGLFLQASLLVKFVMFTLLCLSVMSWTVILQRRSLLTSAKSKSAKFEDKFWSGVDL 63
Query: 70 ETVCKSLKNHH-NIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ K L N GL ++F++ E+ + ++ P + D R M V ++RE+E++
Sbjct: 64 NRLYKELSTRPDNSGLESLFVTGFKEYSRLNKLNSKVPDAVMDGTSRAMRVTLSREMEKL 123
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLC 187
L ++ S +G+ G V G+M F +I + + + PGI E+LI+ +GL
Sbjct: 124 EANLPLFATIGSTSPYIGLFGTVWGIMNSFIAIGSMENATLAMVAPGIAEALIATAMGLF 183
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ IAYN+F K M F EFS+IL RQ
Sbjct: 184 AAIPAVIAYNRFSTQVDKLEMAYANFMEEFSSILHRQA 221
>gi|319899379|ref|YP_004159476.1| tolQ protein [Bartonella clarridgeiae 73]
gi|319403347|emb|CBI76906.1| tolQ protein [Bartonella clarridgeiae 73]
Length = 238
Score = 239 bits (611), Expect = 2e-61, Method: Composition-based stats.
Identities = 87/221 (39%), Positives = 141/221 (63%), Gaps = 1/221 (0%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
I I LFMQ VK ++ L SI SW++I+ K +++ +RR FE+ FWSGQ LE
Sbjct: 13 IGILNLFMQANWIVKVVMIGLVFASIWSWAIILDKLISYRHIRRNIHHFERDFWSGQPLE 72
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
+ + + + ++ +F++AM+EWKKS KG+ +P+ +Q RID+ MD+A+ RE +I
Sbjct: 73 DLYATYNSQRSDSISVVFLAAMTEWKKSLSKGSHTPLSLQTRIDKAMDLALGRESVKIES 132
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVS 189
+L FL ++ SAG +G+ G V+G+M F SI+ + ++ + PGI E+L++ +GL +
Sbjct: 133 RLGFLATLGSAGPFIGLFGTVVGIMNSFLSISASQNTSLAIVAPGIAEALLATAIGLFAA 192
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
IP+ IAYNK I +S + ++E F++EFS ILSR+ + S
Sbjct: 193 IPAVIAYNKLISESAQIIAKIENFSDEFSTILSRRIDETTS 233
>gi|254239317|ref|ZP_04932640.1| TolQ protein [Pseudomonas aeruginosa C3719]
gi|126171248|gb|EAZ56759.1| TolQ protein [Pseudomonas aeruginosa C3719]
Length = 231
Score = 239 bits (611), Expect = 2e-61, Method: Composition-based stats.
Identities = 64/218 (29%), Positives = 112/218 (51%), Gaps = 3/218 (1%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLET 71
S+++L + V+ ++ L S+ SW +I Q+ ++ FE+ FWSG L
Sbjct: 10 SMWSLISNASIVVQLVMLTLVAASVTSWIMIFQRGNAMRAAKKALDAFEERFWSGIDLSK 69
Query: 72 VCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+ + ++ + G+ IF + E+ + + P + + + M VAI+RE E++
Sbjct: 70 LYRQAGSNPDPDSGVEQIFRAGFKEFSRLRQQPGVDPDAVMEGVALAMRVAISREEEKLE 129
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCV 188
L FL ++ S VG+ G V G+M F+ +A + ++ PGI E+LI+ +GL
Sbjct: 130 ASLPFLATVGSTSPYVGLFGTVWGIMNSFRGLATVQQATLATVAPGIAEALIATAIGLFA 189
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ IAYN+F S+ + FA+EF AIL R+
Sbjct: 190 AIPAVIAYNRFSARSEMLIGRYYTFADEFQAILHRKVH 227
>gi|50120309|ref|YP_049476.1| colicin uptake protein TolQ [Pectobacterium atrosepticum SCRI1043]
gi|49610835|emb|CAG74280.1| TolQ protein [Pectobacterium atrosepticum SCRI1043]
Length = 228
Score = 239 bits (611), Expect = 2e-61, Method: Composition-based stats.
Identities = 69/221 (31%), Positives = 113/221 (51%), Gaps = 3/221 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
+ D+++F LF++ L VK I+ +L FSI SW++IIQ++ R FE FWSG
Sbjct: 1 MTDMNVFDLFLKASLLVKLIMLILICFSIASWAIIIQRTRILNAATRDAEAFEDKFWSGI 60
Query: 68 SLETVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
L + + + + G IF S E+ + + P + + R M +++ REL
Sbjct: 61 ELSRLYQESQTRRDSLTGTEQIFHSGFKEFARLHRVNSHVPEAVVEGASRAMRISMNREL 120
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILL 184
E + + FLG++ S +G+ G V G+M F ++ + + PGI E+LI+ +
Sbjct: 121 ETLETHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMVAPGIAEALIATAI 180
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
GL +IP+ +AYN+ + K + F EF AIL RQ
Sbjct: 181 GLFAAIPAVMAYNRLSQRVGKLEQNYDNFTEEFIAILHRQA 221
>gi|269963135|ref|ZP_06177470.1| tolQ protein [Vibrio harveyi 1DA3]
gi|269832099|gb|EEZ86223.1| tolQ protein [Vibrio harveyi 1DA3]
Length = 232
Score = 239 bits (611), Expect = 2e-61, Method: Composition-based stats.
Identities = 73/219 (33%), Positives = 111/219 (50%), Gaps = 3/219 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
DISI LF+Q L VK ++ L SI SW++II++S + FE FWSG L
Sbjct: 4 DISILDLFLQASLLVKLVMLTLLGMSIASWAMIIKRSKVLSQASKDAESFEDKFWSGTDL 63
Query: 70 ETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + +K G IF + +E+ + A SP I + R M VA+ARE++E
Sbjct: 64 SQLYQKVKGRKEDITGTEEIFYAGFTEFARLRKSNANSPAYIMEGTGRAMRVAVAREVDE 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
+ L FL ++ S +G+ G V G+M F ++ + + PGI E+LI+ +GL
Sbjct: 124 LETSLPFLATVGSISPYIGLFGTVWGIMHAFIALGEVKQATLSMVAPGIAEALIATAMGL 183
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ +AYN+ K F+ EF +IL RQ
Sbjct: 184 FAAIPAVMAYNRLSNKVSKLEHTYATFSEEFHSILHRQA 222
>gi|296103333|ref|YP_003613479.1| colicin uptake protein TolQ [Enterobacter cloacae subsp. cloacae
ATCC 13047]
gi|295057792|gb|ADF62530.1| colicin uptake protein TolQ [Enterobacter cloacae subsp. cloacae
ATCC 13047]
Length = 230
Score = 239 bits (611), Expect = 2e-61, Method: Composition-based stats.
Identities = 69/221 (31%), Positives = 116/221 (52%), Gaps = 3/221 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
+ D++I LF++ L VK I+ +L FSI SW++IIQ++ R+ FE FWSG
Sbjct: 1 MTDMNILDLFLKASLLVKLIMLILIGFSIASWAIIIQRTRILNAAGREAEAFEDKFWSGI 60
Query: 68 SLETVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
L + + + + G IF S E+ + + +P + + R M +++ REL
Sbjct: 61 ELSRLYQESQGRRDSLAGSEQIFYSGFKEFARLHRANSHAPEAVVEGASRAMRISMNREL 120
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILL 184
E + + FLG++ S +G+ G V G+M F ++ + + PGI E+LI+ +
Sbjct: 121 ENLETHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMVAPGIAEALIATAI 180
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
GL +IP+ +AYN+ + K + + F EF+AIL RQ
Sbjct: 181 GLFAAIPAVMAYNRLNQRVNKLELNYDNFMEEFTAILHRQA 221
>gi|237730718|ref|ZP_04561199.1| colicin uptake protein TolQ [Citrobacter sp. 30_2]
gi|226906257|gb|EEH92175.1| colicin uptake protein TolQ [Citrobacter sp. 30_2]
Length = 230
Score = 239 bits (611), Expect = 2e-61, Method: Composition-based stats.
Identities = 69/221 (31%), Positives = 116/221 (52%), Gaps = 3/221 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
+ D++I LF++ L VK I+ +L FSI SW++IIQ++ R+ FE FWSG
Sbjct: 1 MTDMNILDLFLKASLLVKLIMLILIGFSIASWAIIIQRTRILNAASREAEAFEDKFWSGI 60
Query: 68 SLETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
L + + + + G IF S E+ + + +P + + R M +++ REL
Sbjct: 61 ELSRLYQESQGRRDNLAGSEQIFYSGFKEFARLHRANSHAPEAVVEGASRAMRISMNREL 120
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILL 184
E + + FLG++ S +G+ G V G+M F ++ + + PGI E+LI+ +
Sbjct: 121 ETLETHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMVAPGIAEALIATAI 180
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
GL +IP+ +AYN+ + K + + F EF+AIL RQ
Sbjct: 181 GLFAAIPAVMAYNRLNQRVNKLELNYDNFMEEFTAILHRQA 221
>gi|71909665|ref|YP_287252.1| MotA/TolQ/ExbB proton channel [Dechloromonas aromatica RCB]
gi|71849286|gb|AAZ48782.1| Cell division and transport-associated protein TolQ [Dechloromonas
aromatica RCB]
Length = 225
Score = 239 bits (611), Expect = 2e-61, Method: Composition-based stats.
Identities = 71/222 (31%), Positives = 106/222 (47%), Gaps = 3/222 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
D+SI L +Q V+ ++ LL S +SW I K + R + FE+ FWSG
Sbjct: 4 TQDLSILHLILQASAVVQAVMALLAGVSFMSWYYIFMKLFSVKQARSKTETFERDFWSGG 63
Query: 68 SLETVCKSL--KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
L + S HH + IF + E+ K + P I D R M RE+
Sbjct: 64 DLNNLYNSAVNDRHHAGSMERIFEAGFREFTKLKGQKNLDPKDIVDGSRRAMRATYQREM 123
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV-SIPGIIESLISILL 184
+ + LSFL S+ S +G+ G V G+M F+ ++ + PGI E+L++ +
Sbjct: 124 DALESHLSFLASVGSVSPYIGLFGTVWGIMHAFRGLSNVGQATLASVAPGIAEALVATAI 183
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
GL +IP+ +AYN+F D + A + E F EFS IL RQ
Sbjct: 184 GLFAAIPAVLAYNRFSHDIDRLATRYESFMEEFSNILQRQMR 225
>gi|253687640|ref|YP_003016830.1| protein TolQ [Pectobacterium carotovorum subsp. carotovorum PC1]
gi|251754218|gb|ACT12294.1| protein TolQ [Pectobacterium carotovorum subsp. carotovorum PC1]
Length = 228
Score = 239 bits (611), Expect = 2e-61, Method: Composition-based stats.
Identities = 69/221 (31%), Positives = 115/221 (52%), Gaps = 3/221 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
+ D+++F LF++ L VK I+ +L FSI SW++IIQ++ R+ FE FWSG
Sbjct: 1 MTDMNVFDLFLKASLLVKLIMLILICFSIASWAIIIQRTRILNAATREAEAFEDKFWSGI 60
Query: 68 SLETVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
L + + ++ + G IF S E+ + + +P + + R M +++ REL
Sbjct: 61 ELSRLYQESQSRRDSLTGTEQIFHSGFKEFARLHRANSHAPEAVVEGASRAMRISMNREL 120
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILL 184
E + + FLG++ S +G+ G V G+M F ++ + + PGI E+LI+ +
Sbjct: 121 ETLETHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMVAPGIAEALIATAI 180
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
GL +IP+ +AYN+ K + F EF AIL RQ
Sbjct: 181 GLFAAIPAVMAYNRLSLRVGKLEQNYDNFTEEFIAILHRQA 221
>gi|254436624|ref|ZP_05050118.1| protein TolQ [Octadecabacter antarcticus 307]
gi|198252070|gb|EDY76384.1| protein TolQ [Octadecabacter antarcticus 307]
Length = 248
Score = 239 bits (611), Expect = 2e-61, Method: Composition-based stats.
Identities = 75/221 (33%), Positives = 119/221 (53%), Gaps = 1/221 (0%)
Query: 7 AIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG 66
A D +++ALF + + V+ ++ +L SI W+V I K+V + R + F++ FWSG
Sbjct: 27 AAQDFTMWALFTRATILVQLVMIMLVAASIWCWAVFIDKTVQYRKARAEADAFDRSFWSG 86
Query: 67 QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
+ L+ + + IF S M EW++S + RI+ MDV IA++
Sbjct: 87 EPLDALFGKIGAEPQGSTEKIFASGMLEWRRSHREDGGLIPDSTARINTSMDVTIAKQSS 146
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLG 185
++ + L L ++ S VG+ G V G+M F I+ + N+ V PGI E+L+S +G
Sbjct: 147 KLQKGLPILATVGSTAPFVGLFGTVWGIMNAFIEISQAQTTNLAVVAPGIAEALMSTGIG 206
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
L +IP+ I YNK DS++ E FA+EF+ ILSRQ E
Sbjct: 207 LLAAIPAVIIYNKLSTDSEQIVSGYEAFADEFANILSRQVE 247
>gi|120599222|ref|YP_963796.1| MotA/TolQ/ExbB proton channel [Shewanella sp. W3-18-1]
gi|146292704|ref|YP_001183128.1| MotA/TolQ/ExbB proton channel [Shewanella putrefaciens CN-32]
gi|120559315|gb|ABM25242.1| MotA/TolQ/ExbB proton channel [Shewanella sp. W3-18-1]
gi|145564394|gb|ABP75329.1| MotA/TolQ/ExbB proton channel [Shewanella putrefaciens CN-32]
gi|319426008|gb|ADV54082.1| TonB system biopolymer transport inner membrane component, TolQ
[Shewanella putrefaciens 200]
Length = 228
Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats.
Identities = 73/218 (33%), Positives = 117/218 (53%), Gaps = 2/218 (0%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+SI LF+Q L VK ++ L S++SW+VI+Q+ + + + +FE FWSG L
Sbjct: 4 DMSIVGLFLQASLLVKFVMFTLLALSVMSWTVILQRRSLLSSAKGKSAKFEDKFWSGVDL 63
Query: 70 ETVCKSLKNHH-NIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ K L N GL ++F++ E+ + ++ P + D R M V ++RE+E++
Sbjct: 64 NRLYKELSARPDNTGLESLFVTGFKEYSRLNKLNSKVPDAVMDGTSRAMRVTLSREMEKL 123
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLC 187
L L ++ S +G+ G V G+M F +I + + + PGI E+LI+ +GL
Sbjct: 124 EANLPLLATIGSTSPYIGLFGTVWGIMNSFIAIGSMENATLAMVAPGIAEALIATAMGLF 183
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ IAYN+F K M F EFS+IL RQ
Sbjct: 184 AAIPAVIAYNRFSTQVDKLEMAYANFMEEFSSILHRQA 221
>gi|253990436|ref|YP_003041792.1| colicin uptake protein TolQ [Photorhabdus asymbiotica subsp.
asymbiotica ATCC 43949]
gi|253781886|emb|CAQ85050.1| tolq protein [Photorhabdus asymbiotica]
Length = 231
Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats.
Identities = 70/221 (31%), Positives = 114/221 (51%), Gaps = 3/221 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
+ D++I LF++ GL V+ I+ +L FSI SW++IIQ++ R+ FE FWSG
Sbjct: 1 MADMNILDLFLKAGLLVQLIMLILICFSIASWAIIIQRTKILNAATREAEAFEDKFWSGI 60
Query: 68 SLETVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
L + K ++ + G IF S E+ + +P + R M +++ REL
Sbjct: 61 ELSRLYKESQSRRDSLGGTEQIFYSGFKEFARLHHANNHAPEAVVTGASRAMRISMNREL 120
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILL 184
E + + FLG++ S +G+ G V G+M F ++ + + PGI E+LI+ +
Sbjct: 121 ETLESHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMVAPGIAEALIATAI 180
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
GL +IP+ +AYN+ + K + F EF AIL RQ
Sbjct: 181 GLFAAIPAVMAYNRLNQRVNKLEQNYDNFMEEFLAILHRQA 221
>gi|251790485|ref|YP_003005206.1| colicin uptake protein TolQ [Dickeya zeae Ech1591]
gi|271499761|ref|YP_003332786.1| protein TolQ [Dickeya dadantii Ech586]
gi|247539106|gb|ACT07727.1| protein TolQ [Dickeya zeae Ech1591]
gi|270343316|gb|ACZ76081.1| protein TolQ [Dickeya dadantii Ech586]
Length = 228
Score = 239 bits (610), Expect = 3e-61, Method: Composition-based stats.
Identities = 68/221 (30%), Positives = 112/221 (50%), Gaps = 3/221 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
+ D++I LF++ L VK I+ +L FSI SW++IIQ++ R FE FWSG
Sbjct: 1 MTDMNILDLFLKASLLVKLIMLILIGFSIASWAIIIQRTRILNAATRDAEAFEDKFWSGI 60
Query: 68 SLETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
L + + + G IF + E+ + + +P + + R M +++ REL
Sbjct: 61 ELSRLYQESQTRRENLTGTEQIFYAGFKEFARLHRANSHAPEAVVEGASRAMRISLNREL 120
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILL 184
E + + FLG++ S +G+ G V G+M F ++ + + PGI E+LI+ +
Sbjct: 121 ETLETHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMVAPGIAEALIATAI 180
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
GL +IP+ +AYN+ + K + F EF AIL RQ
Sbjct: 181 GLFAAIPAVMAYNRLNQRVNKLEQNYDNFMEEFIAILHRQA 221
>gi|323495164|ref|ZP_08100249.1| hypothetical protein VIBR0546_08520 [Vibrio brasiliensis LMG 20546]
gi|323310604|gb|EGA63783.1| hypothetical protein VIBR0546_08520 [Vibrio brasiliensis LMG 20546]
Length = 231
Score = 238 bits (609), Expect = 3e-61, Method: Composition-based stats.
Identities = 71/219 (32%), Positives = 115/219 (52%), Gaps = 3/219 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
DIS+ LF+Q L VK ++ +L SI+SW++II++S ++ FE FWSG L
Sbjct: 4 DISMLDLFLQASLLVKMVMLILLGMSIVSWAMIIKRSKVLSQASKEAETFEDKFWSGTDL 63
Query: 70 ETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ ++ K + G IF S +E+ + A SP I + R M VA+ARE+++
Sbjct: 64 SILYQNAKKRKDDLAGTEEIFYSGFTEFARLRKSNADSPDFIMEGTGRAMRVAVAREVDD 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ L FL ++ S +G+ G V G+M F ++ + + PGI E+L++ +GL
Sbjct: 124 LETNLPFLATVGSISPYIGLFGTVWGIMHAFIALGEVKQATLAMVAPGIAEALVATAMGL 183
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ +AYN+ K F+ EF +IL RQ
Sbjct: 184 FAAIPAVMAYNRLSNKVGKLEHNYATFSEEFHSILHRQA 222
>gi|170727079|ref|YP_001761105.1| protein TolQ [Shewanella woodyi ATCC 51908]
gi|169812426|gb|ACA87010.1| protein TolQ [Shewanella woodyi ATCC 51908]
Length = 229
Score = 238 bits (609), Expect = 3e-61, Method: Composition-based stats.
Identities = 76/219 (34%), Positives = 115/219 (52%), Gaps = 3/219 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
DIS LF+Q L VK ++ L S++SW+VIIQ+ R+ +FE FWSG L
Sbjct: 4 DISFIGLFLQASLLVKFVMLTLLALSVVSWAVIIQRRRLLTAARQSSLKFEDKFWSGVDL 63
Query: 70 ETVCKSL--KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ K L + N GL A+F S E+ + + P + D R M V+++RE+E+
Sbjct: 64 NKLYKELSARQDSNAGLEALFHSGFKEYARLSKLNNKVPEAVMDGSYRAMRVSLSREMEK 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ L L ++ S +G+ G V G+M F ++ + + + PGI E+LI+ +GL
Sbjct: 124 LETHLPLLATIGSTSPYIGLFGTVWGIMNSFIALGAVENATLAMVAPGIAEALIATAMGL 183
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ IAYN+F K M F EFS+IL RQ
Sbjct: 184 FAAIPAVIAYNRFSTQVDKIEMSYANFMEEFSSILHRQA 222
>gi|307130106|ref|YP_003882122.1| membrane spanning protein in TolA-TolQ-TolR complex [Dickeya
dadantii 3937]
gi|16116634|emb|CAC82706.1| TolQ protein [Erwinia chrysanthemi]
gi|306527635|gb|ADM97565.1| membrane spanning protein in TolA-TolQ-TolR complex [Dickeya
dadantii 3937]
Length = 228
Score = 238 bits (608), Expect = 4e-61, Method: Composition-based stats.
Identities = 68/221 (30%), Positives = 112/221 (50%), Gaps = 3/221 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
+ D++I LF++ L VK I+ +L FSI SW++IIQ++ R FE FWSG
Sbjct: 1 MTDMNILDLFLKASLLVKLIMLILIGFSIASWAIIIQRTRILNAATRDAEAFEDKFWSGI 60
Query: 68 SLETVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
L + + + G IF + E+ + + +P + + R M +++ REL
Sbjct: 61 ELSRLYQESQTRRESLGGTEQIFYAGFKEFARLHRANSHAPEAVVEGASRAMRISMNREL 120
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILL 184
E + + FLG++ S +G+ G V G+M F ++ + + PGI E+LI+ +
Sbjct: 121 ETLETHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMVAPGIAEALIATAI 180
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
GL +IP+ +AYN+ + K + F EF AIL RQ
Sbjct: 181 GLFAAIPAVMAYNRLNQRVNKLEQNYDNFMEEFIAILHRQA 221
>gi|260768869|ref|ZP_05877803.1| MotA/TolQ/ExbB proton channel family protein [Vibrio furnissii CIP
102972]
gi|260616899|gb|EEX42084.1| MotA/TolQ/ExbB proton channel family protein [Vibrio furnissii CIP
102972]
gi|315180562|gb|ADT87476.1| TolQ protein [Vibrio furnissii NCTC 11218]
Length = 227
Score = 238 bits (608), Expect = 4e-61, Method: Composition-based stats.
Identities = 70/219 (31%), Positives = 113/219 (51%), Gaps = 3/219 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
DISI LF+Q VK ++ +L SI+SW++II++S R FE FWSG L
Sbjct: 4 DISILDLFLQASFLVKVVMLILLGMSIVSWAMIIKRSKVLSQAARSAEAFEDKFWSGTDL 63
Query: 70 ETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + +K + G IF S +E+ + A SP + + R M V++ARE+++
Sbjct: 64 SVLYQDVKKRKDEIAGTEEIFYSGFTEFARLRKTNAASPDYVMEGTGRAMRVSVAREVDD 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ L FL ++ S +G+ G V G+M F ++ + + PGI E+L++ +GL
Sbjct: 124 LETNLPFLATVGSISPYIGLFGTVWGIMHAFIALGQVKQATLAMVAPGIAEALVATAMGL 183
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ +AYN+ K F+ EF +IL RQ
Sbjct: 184 FAAIPAVMAYNRLSNKVSKLEHGYATFSEEFHSILHRQA 222
>gi|77460626|ref|YP_350133.1| MotA/TolQ/ExbB proton channel [Pseudomonas fluorescens Pf0-1]
gi|77384629|gb|ABA76142.1| Cell division and transport-associated protein TolQ [Pseudomonas
fluorescens Pf0-1]
Length = 221
Score = 238 bits (608), Expect = 4e-61, Method: Composition-based stats.
Identities = 66/217 (30%), Positives = 114/217 (52%), Gaps = 3/217 (1%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
+++L + V+ ++ L S+ SW +I Q+S RR FE+ FWSG L +
Sbjct: 1 MWSLVSNASIVVQLVMLTLVAASVTSWIMIFQRSNLIRAGRRALESFEERFWSGIDLSKL 60
Query: 73 CKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
+ ++ + G+ IF + E+ + + P + + + R M VAI+RE E++ +
Sbjct: 61 YRQAGSNPDPDSGVEQIFRAGFKEFSRLRQQPGVDPEAVMEGVARAMRVAISREEEKLEQ 120
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCVS 189
L FL ++ S +G+ G V G+M F+ +A + ++ PGI E+LI+ +GL +
Sbjct: 121 SLPFLATVGSVSPYIGLFGTVWGIMNSFRGLASAQQATLATVAPGIAEALIATAIGLFAA 180
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
IP+ IAYN+F S+ + FA+EF AIL R+
Sbjct: 181 IPAVIAYNRFSARSETLLSRYYTFADEFQAILHRKVH 217
>gi|157369519|ref|YP_001477508.1| colicin uptake protein TolQ [Serratia proteamaculans 568]
gi|270263782|ref|ZP_06192051.1| hypothetical protein SOD_e04120 [Serratia odorifera 4Rx13]
gi|293397225|ref|ZP_06641498.1| TolQ colicin import protein [Serratia odorifera DSM 4582]
gi|157321283|gb|ABV40380.1| Tol-Pal system TolQ [Serratia proteamaculans 568]
gi|270042666|gb|EFA15761.1| hypothetical protein SOD_e04120 [Serratia odorifera 4Rx13]
gi|291420245|gb|EFE93501.1| TolQ colicin import protein [Serratia odorifera DSM 4582]
Length = 224
Score = 238 bits (608), Expect = 4e-61, Method: Composition-based stats.
Identities = 67/218 (30%), Positives = 111/218 (50%), Gaps = 3/218 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
++I LF++ L VK I+ +L FS+ SW++IIQ++ R FE FWSG L
Sbjct: 1 MNILDLFLKASLLVKLIMLILICFSVASWAIIIQRTRILNAATRDAEAFEDKFWSGIELS 60
Query: 71 TVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ + + + G IF S E+ + +P + + R M +++ RELE +
Sbjct: 61 RLYQESQARRDSLTGSEQIFHSGFKEFARLHRANNHAPESVIEGASRAMRISMNRELETL 120
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
+ FLG++ S +G+ G V G+M F ++ + + PGI E+LI+ +GL
Sbjct: 121 ENHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMVAPGIAEALIATAIGLF 180
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ +AYN+ + K + F EF+AIL RQ
Sbjct: 181 AAIPAVMAYNRLNQRVNKLEQNYDNFMEEFTAILHRQA 218
>gi|238920741|ref|YP_002934256.1| colicin uptake protein TolQ [Edwardsiella ictaluri 93-146]
gi|238870310|gb|ACR70021.1| protein TolQ, putative [Edwardsiella ictaluri 93-146]
Length = 227
Score = 238 bits (608), Expect = 5e-61, Method: Composition-based stats.
Identities = 69/221 (31%), Positives = 112/221 (50%), Gaps = 3/221 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
+ D++I LF++ L VK I+ +L FS+ SW++IIQ++ R FE FWSG
Sbjct: 1 MTDMNILDLFLKASLLVKLIMLVLICFSVASWAIIIQRTRILNAATRDAEAFEDKFWSGI 60
Query: 68 SLETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
L + + + + G IF S E+ + + +P G+ + R M +++ RE+
Sbjct: 61 ELSRLYQESQTRRDGLSGSEQIFYSGFKEFARLHRMNSHAPEGVIEGASRAMRISLNREI 120
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILL 184
E + + FLG++ S +G+ G V G+M F + + + PGI E+LI+ +
Sbjct: 121 EAMENHIPFLGTVGSISPYIGLFGTVWGIMHAFIGLGAVKQATLQMVAPGIAEALIATAI 180
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
GL +IP+ +AYN+ K E F EF AIL RQ
Sbjct: 181 GLFAAIPAVMAYNRLNLRVNKLEQNYENFMEEFIAILHRQA 221
>gi|24374292|ref|NP_718335.1| MotA/TolQ/ExbB proton channel family protein [Shewanella oneidensis
MR-1]
gi|24348830|gb|AAN55779.1|AE015714_6 MotA/TolQ/ExbB proton channel family protein [Shewanella oneidensis
MR-1]
Length = 228
Score = 238 bits (607), Expect = 5e-61, Method: Composition-based stats.
Identities = 73/218 (33%), Positives = 116/218 (53%), Gaps = 2/218 (0%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S LF+Q L VK ++ L SI+SW+VI+Q+ + + +FE FWSG L
Sbjct: 4 DMSFIGLFLQASLLVKFVMFTLLGLSIMSWTVILQRRSLLTGAKNKSAKFEDKFWSGVDL 63
Query: 70 ETVCKSLKNHH-NIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ K L N GL ++F++ E+ + ++ P + D R M V ++RELE++
Sbjct: 64 NRLYKELSARPDNTGLESLFVTGFKEYSRLNKLNSKVPDAVMDGTSRAMRVTLSRELEKL 123
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLC 187
L L ++ S +G+ G V G+M F +I + + + PGI E+LI+ +GL
Sbjct: 124 EANLPLLATIGSTSPYIGLFGTVWGIMNSFIAIGSMENATLAMVAPGIAEALIATAMGLF 183
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ IAYN+F +K + F EFS+IL RQ
Sbjct: 184 AAIPAVIAYNRFATQVEKLEIAYANFMEEFSSILHRQA 221
>gi|329295945|ref|ZP_08253281.1| colicin uptake protein TolQ [Plautia stali symbiont]
Length = 228
Score = 238 bits (607), Expect = 6e-61, Method: Composition-based stats.
Identities = 68/221 (30%), Positives = 115/221 (52%), Gaps = 3/221 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
+ D+++ LF++ L VK I+ +L FSI SW++IIQ++ R+ FE FWSG
Sbjct: 1 MTDMNVLDLFLKASLLVKLIMLILIGFSIASWAIIIQRTRILNAAGREAEAFEDKFWSGI 60
Query: 68 SLETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
L + + + + G IF S E+ + + +P + + R M +++ REL
Sbjct: 61 ELSRLYQESQARRDELSGSEQIFYSGFKEFARLHRANSHAPEAVVEGAGRAMRISMNREL 120
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILL 184
E + + FLG++ S +G+ G V G+M F ++ + + PGI E+LI+ +
Sbjct: 121 EALENHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMVAPGIAEALIATAI 180
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
GL +IP+ +AYN+ + K + F EF+AIL RQ
Sbjct: 181 GLFAAIPAVMAYNRLNQRVNKLEQGYDNFMEEFTAILHRQA 221
>gi|288957822|ref|YP_003448163.1| biopolymer transport protein [Azospirillum sp. B510]
gi|288910130|dbj|BAI71619.1| biopolymer transport protein [Azospirillum sp. B510]
Length = 244
Score = 238 bits (607), Expect = 6e-61, Method: Composition-based stats.
Identities = 82/230 (35%), Positives = 128/230 (55%), Gaps = 3/230 (1%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N +I+I LF Q VK ++ +L I SI W++II+K + L Q FE+
Sbjct: 12 NAAATTAHEITILGLFWQADAIVKIVMMMLVIASIWCWAIIIEKLMRLRRLNAQADAFEE 71
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARS--PIGIQDRIDRMMDV 119
FWSG SL+ + + + +AA F + M EW+ + D+G +Q R++R+M V
Sbjct: 72 AFWSGGSLDALYDRIGQSPSDPMAATFAAGMREWRHAADRGIGGTMKSSLQQRVERVMAV 131
Query: 120 AIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIES 178
I RE+ ++FL S+ S +G+ G V G+M F SIAG + ++ V PGI E+
Sbjct: 132 TIGREMARAERYMTFLASVGSTAPFIGLFGTVWGIMNSFTSIAGSGNTSLAVVAPGIAEA 191
Query: 179 LISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
L + +GL +IP+ ++YNKF D ++A +++ F+ EFSAILSR E
Sbjct: 192 LFATAMGLLAAIPAVLSYNKFSTDLGRYADRLDTFSGEFSAILSRHLEER 241
>gi|241662338|ref|YP_002980698.1| protein TolQ [Ralstonia pickettii 12D]
gi|240864365|gb|ACS62026.1| protein TolQ [Ralstonia pickettii 12D]
Length = 230
Score = 238 bits (607), Expect = 6e-61, Method: Composition-based stats.
Identities = 75/231 (32%), Positives = 121/231 (52%), Gaps = 6/231 (2%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
MN + D+SI +L + L V+ ++ LL + S+ SW+ I +K+ R Q FE
Sbjct: 1 MNPVEV-TQDLSIVSLVLHASLLVQFVMGLLLVMSLFSWTYIFRKAFALRAARSQTESFE 59
Query: 61 QLFWSGQSLETVCKSLKNHHNI--GLAAIFMSAMSEWKKSCD--KGARSPIGIQDRIDRM 116
+ FW+G L+ + +S N+ + L IF + M E+ K+ + +G P I D R
Sbjct: 60 RDFWAGGDLQALYQSAANNRHTTGALERIFEAGMREYLKARELQRGGGDPSAILDASRRA 119
Query: 117 MDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGI 175
M A RE++ + L FL S+ S +G+ G V G+M F+ ++ + PGI
Sbjct: 120 MRAAYQREMDSLESHLPFLASVGSVSPYIGLFGTVWGIMNAFRGLSNVQQATLSAVAPGI 179
Query: 176 IESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
E+L++ +GL +IP+ IAYN++ + + A + E F EFS IL RQT
Sbjct: 180 AEALVATAIGLFAAIPAVIAYNRYATEIDRLANRFESFMEEFSNILQRQTR 230
>gi|227327553|ref|ZP_03831577.1| colicin uptake protein TolQ [Pectobacterium carotovorum subsp.
carotovorum WPP14]
Length = 225
Score = 237 bits (606), Expect = 7e-61, Method: Composition-based stats.
Identities = 68/218 (31%), Positives = 113/218 (51%), Gaps = 3/218 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+++F LF++ L VK I+ +L FSI SW++IIQ++ R+ FE FWSG L
Sbjct: 1 MNVFDLFLKASLLVKLIMLILICFSIASWAIIIQRTRILNAATREAEAFEDKFWSGIELS 60
Query: 71 TVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ + + + G IF S E+ + + +P + + R M +++ RELE +
Sbjct: 61 RLYQESQTRRDSLTGTEQIFHSGFKEFARLHRVNSHAPEAVVEGASRAMRISMNRELETL 120
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
+ FLG++ S +G+ G V G+M F ++ + + PGI E+LI+ +GL
Sbjct: 121 ETHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMVAPGIAEALIATAIGLF 180
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ +AYN+ + K + F EF AIL RQ
Sbjct: 181 AAIPAVMAYNRLNQRVGKLEQNYDNFTEEFIAILHRQA 218
>gi|256823068|ref|YP_003147031.1| protein TolQ [Kangiella koreensis DSM 16069]
gi|256796607|gb|ACV27263.1| protein TolQ [Kangiella koreensis DSM 16069]
Length = 237
Score = 237 bits (606), Expect = 7e-61, Method: Composition-based stats.
Identities = 71/219 (32%), Positives = 117/219 (53%), Gaps = 3/219 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+SI LF+ + V+ I+ LL + S++SW++I Q+S + R+ ++FE FWSG L
Sbjct: 18 MSIANLFLHASIPVQAIMVLLLVISVISWAMIFQRSSVLNSASRESKKFEDRFWSGIDLG 77
Query: 71 TVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ L GL ++F + E+ + + SP + D R M VA +RE+E++
Sbjct: 78 KLSTDLSQRQKPVTGLESLFQAGYREFMRLRQQSGVSPEAVMDGTHRAMRVAHSREVEKL 137
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLC 187
LSFL ++ S +G+ G V G+M F ++ + + PGI E+LI+ +GL
Sbjct: 138 ERNLSFLATVGSVTPYIGLFGTVWGIMNSFIALGAVKQATLAMVAPGIAEALIATAMGLF 197
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ IAYN+F ++ Q E F EFS +L R+
Sbjct: 198 AAIPAVIAYNRFTNRLQRIETQYENFLEEFSGVLHRKAH 236
>gi|152996213|ref|YP_001341048.1| Tol-Pal system TolQ [Marinomonas sp. MWYL1]
gi|150837137|gb|ABR71113.1| Tol-Pal system TolQ [Marinomonas sp. MWYL1]
Length = 226
Score = 237 bits (606), Expect = 7e-61, Method: Composition-based stats.
Identities = 69/219 (31%), Positives = 112/219 (51%), Gaps = 3/219 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+SI+ L V+ ++ +L SI SW VI Q+ ++ FE+ FWSG L
Sbjct: 1 MSIWGLIASASFVVQLVMLILLAASIFSWIVIFQRIRVLKEAKKVRTAFEESFWSGIDLS 60
Query: 71 TVCKSL--KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ + L + G+ IF S + E+ + P I D + R M VA+ RE E++
Sbjct: 61 QLYRKLTQEGRKVEGMENIFTSGIKEFTRLRQSHNVDPEAIMDGVQRAMRVALYREEEKL 120
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLC 187
+ L FL ++ S +G+ G V G+M F +A + ++ PGI E+LI+ +GL
Sbjct: 121 DQHLPFLATVGSTSPYIGLFGTVWGIMHSFIGLAEVQQATLATVAPGIAEALIATAIGLA 180
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ IAYN+F ++ E FA+EF++IL R+
Sbjct: 181 AAIPAVIAYNRFSSTAESLGSSYENFADEFTSILHRKVH 219
>gi|83592427|ref|YP_426179.1| MotA/TolQ/ExbB proton channel [Rhodospirillum rubrum ATCC 11170]
gi|83575341|gb|ABC21892.1| MotA/TolQ/ExbB proton channel [Rhodospirillum rubrum ATCC 11170]
Length = 308
Score = 237 bits (606), Expect = 7e-61, Method: Composition-based stats.
Identities = 75/222 (33%), Positives = 124/222 (55%), Gaps = 4/222 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+S +++F Q + VK ++ L SI SW+++ +K V L ++ +FE+ FWSG SLE
Sbjct: 86 LSAWSMFWQADIIVKMVMLSLVGASIWSWTIVFEKIVRLRDLNKKAEQFEEKFWSGGSLE 145
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDK---GARSPIGIQDRIDRMMDVAIARELEE 127
+ + + A+F++AM EW+ S + A + + R++R+M + RELE
Sbjct: 146 DLFDRIGQRPRDPMTAVFVAAMREWRHSAQRRNGAAGARAMLAQRVERVMGITQNRELET 205
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ +L FL S + VG+ G V G+M F +I ++ ++ PGI E+L + LGL
Sbjct: 206 LERRLGFLASTGAVAPFVGLFGTVWGIMNSFHAIGMSNDTSLATVAPGIAEALFATALGL 265
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
+IP+ IAYNK D ++A ++E F+ EF AIL RQ +
Sbjct: 266 VAAIPAVIAYNKLSADIDRYAGRLEAFSGEFGAILGRQLDER 307
>gi|261868495|ref|YP_003256417.1| protein TolQ [Aggregatibacter actinomycetemcomitans D11S-1]
gi|293390511|ref|ZP_06634845.1| protein TolQ [Aggregatibacter actinomycetemcomitans D7S-1]
gi|261413827|gb|ACX83198.1| protein TolQ [Aggregatibacter actinomycetemcomitans D11S-1]
gi|290951045|gb|EFE01164.1| protein TolQ [Aggregatibacter actinomycetemcomitans D7S-1]
Length = 229
Score = 237 bits (606), Expect = 7e-61, Method: Composition-based stats.
Identities = 68/222 (30%), Positives = 117/222 (52%), Gaps = 3/222 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
+++ LF++ + V+ +I +L IFSI SW++IIQ+S ++ FE FWSG+ L
Sbjct: 4 ELNFLDLFLKASIVVQLVILILIIFSITSWAIIIQRSRVLTKALKESMAFEDRFWSGEDL 63
Query: 70 ETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + L N + G IF E+ + +P I R M++++ RE+E+
Sbjct: 64 NKLYEGLSNRRDGLTGSEQIFYVGFKEFSRLKQANPDAPEAIIQGSTRAMNLSMNREIED 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
+ ++ FL +++S +G+ G V G+M F S++G + + PGI E+LI+ +GL
Sbjct: 124 LETRVPFLATVASISPYIGLFGTVWGIMHAFLSLSGAKQATLQMVAPGIAEALIATAIGL 183
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
+IP+ +AYN+ K F +EF+ IL RQ G
Sbjct: 184 FAAIPAVMAYNRLSLRVNKLEQNYGNFIDEFTTILHRQVFGK 225
>gi|237809445|ref|YP_002893885.1| protein TolQ [Tolumonas auensis DSM 9187]
gi|237501706|gb|ACQ94299.1| protein TolQ [Tolumonas auensis DSM 9187]
Length = 228
Score = 237 bits (606), Expect = 7e-61, Method: Composition-based stats.
Identities = 66/219 (30%), Positives = 117/219 (53%), Gaps = 3/219 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
++S L ++ V+ ++ +L SI SW++I+Q++ T R +FE+ FWSG L
Sbjct: 5 EMSFTNLILEASPLVQIVMLILLSMSIASWAIIVQRTKVLKTARSISEQFEERFWSGIDL 64
Query: 70 ETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + N + GL IF S E+ + + G ++ I D R M V+++REL+E
Sbjct: 65 NRLYQECANRRDELSGLEQIFYSGFKEFARLHNSGLKNQEMIMDGTYRAMRVSLSRELDE 124
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ L L ++ S +G+ G V G+M F +++ + ++ + P I E+LI+ +GL
Sbjct: 125 LETHLPVLATIGSISPYIGLFGTVWGIMHAFIALSAVKNASLAMVAPPIAEALIATAMGL 184
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ +AYN+F ++ F +EFS IL+RQ
Sbjct: 185 FAAIPAVVAYNRFSTKVERLDNSYINFMDEFSTILNRQL 223
>gi|157962388|ref|YP_001502422.1| Tol-Pal system TolQ [Shewanella pealeana ATCC 700345]
gi|157847388|gb|ABV87887.1| Tol-Pal system TolQ [Shewanella pealeana ATCC 700345]
Length = 229
Score = 237 bits (606), Expect = 8e-61, Method: Composition-based stats.
Identities = 75/219 (34%), Positives = 118/219 (53%), Gaps = 3/219 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
DIS LF+Q L VK ++ L SI SW+VIIQ+ +++ +FE FWSG L
Sbjct: 4 DISFIGLFLQASLLVKLVMLTLLGLSIASWAVIIQRRRLLNAAKKEALKFEDKFWSGVDL 63
Query: 70 ETVCKSL--KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + L + N GL+++F++ E+ + R P + D R M V+++RELE+
Sbjct: 64 NKLYQELSARQDSNSGLSSLFVTGFKEYARLSKLNGRVPEAVMDGSYRAMRVSLSRELEK 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ L L ++ S +G+ G V G+M F ++ + + + PGI E+LI+ +GL
Sbjct: 124 LETHLPLLATIGSTSPYIGLFGTVWGIMNSFIALGAVENATLAMVAPGIAEALIATAMGL 183
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ IAYN+F +K M F EFS+IL RQ
Sbjct: 184 FAAIPAVIAYNRFSTQVEKVEMSYANFMEEFSSILHRQA 222
>gi|304320245|ref|YP_003853888.1| TolQ protein, inner membrane protein, tolerance to group A colicins
[Parvularcula bermudensis HTCC2503]
gi|303299147|gb|ADM08746.1| TolQ protein, inner membrane protein, tolerance to group A colicins
[Parvularcula bermudensis HTCC2503]
Length = 231
Score = 237 bits (606), Expect = 8e-61, Method: Composition-based stats.
Identities = 75/218 (34%), Positives = 128/218 (58%), Gaps = 4/218 (1%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
D SI+ L +Q + V+ ++ +L S+ SW+++ KS+ ++ + ++FE FWSG+
Sbjct: 13 TDFSIWGLILQADIVVQFVMLVLAGMSVWSWTIMFDKSMTLGAIKSKAKKFEDQFWSGRP 72
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
L+ + + +K+ + +A IFM+ M E+ + D+G P R++ + V + RELE+I
Sbjct: 73 LDELGRKVKDKPDHPMARIFMTLMDEFTQ--DRGHGDPAAAS-RLESVARVHVNRELEKI 129
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
+LS L ++ SA +G+ G V G+M F+ I N+ V PGI E+L + LGL
Sbjct: 130 QSQLSVLATIGSAAPFIGLFGTVWGIMNAFRGIGATGDANLAVVAPGIAEALFATALGLV 189
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ I YN++ +A+++EGFA EF AILSR+
Sbjct: 190 AAIPAVIGYNRYAAGVNSYAVRLEGFATEFVAILSRRL 227
>gi|163802044|ref|ZP_02195940.1| TolQ protein [Vibrio sp. AND4]
gi|159174185|gb|EDP58993.1| TolQ protein [Vibrio sp. AND4]
Length = 232
Score = 237 bits (606), Expect = 8e-61, Method: Composition-based stats.
Identities = 71/219 (32%), Positives = 111/219 (50%), Gaps = 3/219 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
DISI LF+Q L VK ++ L SI SW++II++S + FE FWSG L
Sbjct: 4 DISILDLFLQASLLVKLVMLTLLGMSIASWAMIIKRSKVLSQESKSAESFEDKFWSGTDL 63
Query: 70 ETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + +K + G IF + +E+ + A SP + + R M VA+ARE++E
Sbjct: 64 SLLYQKVKGRKDEITGTEEIFYAGFTEFARLRKSNANSPDYVMEGTGRAMRVAVAREVDE 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
+ L FL ++ S +G+ G V G+M F ++ + + PGI E+LI+ +GL
Sbjct: 124 LETSLPFLATVGSISPYIGLFGTVWGIMHAFIALGEVKQATLSMVAPGIAEALIATAMGL 183
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ + YN+ K F+ EF +IL RQ
Sbjct: 184 FAAIPAVMFYNRLSNKVSKLEHTYATFSEEFHSILHRQA 222
>gi|160897904|ref|YP_001563486.1| protein TolQ [Delftia acidovorans SPH-1]
gi|160363488|gb|ABX35101.1| protein TolQ [Delftia acidovorans SPH-1]
Length = 234
Score = 237 bits (606), Expect = 8e-61, Method: Composition-based stats.
Identities = 73/228 (32%), Positives = 114/228 (50%), Gaps = 3/228 (1%)
Query: 6 LAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS 65
+ D+SI +L +Q V+ ++ +L S+ SW+ I +KS +R FEQ FWS
Sbjct: 1 MNSHDMSILSLVLQASWVVQLVMLILVGASVASWATIFRKSQTLKRVRSLNDGFEQDFWS 60
Query: 66 GQSLETVCKSLKNH--HNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAR 123
G SL + S +H + IF S M E++K ++ + D R M + R
Sbjct: 61 GTSLNDLYASAAHHAKQGGPMERIFASGMREYQKLRERRIADVNQLMDGTRRAMRASFQR 120
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISI 182
E++E+ LSFLG++ S +G+ G V G+M F A + ++ PGI E+L++
Sbjct: 121 EMDEVESGLSFLGTVGSVSPYIGLFGTVWGVMHAFTGFANMEQITLATVAPGIAEALVAT 180
Query: 183 LLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
+GL +IP+ AYN++ + A Q E F EFS IL R S
Sbjct: 181 AMGLFAAIPAVTAYNRYAHQIDRVASQQETFIEEFSNILQRNVGATGS 228
>gi|251793060|ref|YP_003007786.1| protein TolQ [Aggregatibacter aphrophilus NJ8700]
gi|247534453|gb|ACS97699.1| protein TolQ [Aggregatibacter aphrophilus NJ8700]
Length = 229
Score = 237 bits (606), Expect = 8e-61, Method: Composition-based stats.
Identities = 69/222 (31%), Positives = 117/222 (52%), Gaps = 3/222 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
+++ LF++ + V+ +I +L IFSI SW++IIQ+S ++ FE FWSG+ L
Sbjct: 4 ELNFLDLFLKASIVVQLVILILIIFSITSWAIIIQRSRVLTKALKESMAFEDRFWSGEDL 63
Query: 70 ETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + L N + G IF E+ + +P I R M++++ RE+E+
Sbjct: 64 NKLYEGLSNRRDGLSGSEQIFYVGFKEFSRLKQANPDAPEAIIKGSTRAMNLSMNREIED 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
I ++ FL +++S +G+ G V G+M F S++G + + PGI E+LI+ +GL
Sbjct: 124 IETRVPFLATVASISPYIGLFGTVWGIMHAFMSLSGAKQATLQMVAPGIAEALIATAIGL 183
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
+IP+ +AYN+ K F +EF+ IL RQ G
Sbjct: 184 FAAIPAVMAYNRLSLRVNKLEQNYGNFIDEFTTILHRQVFGK 225
>gi|295096557|emb|CBK85647.1| Cell division and transport-associated protein TolQ (TC 2.C.1.2.1)
[Enterobacter cloacae subsp. cloacae NCTC 9394]
Length = 227
Score = 237 bits (606), Expect = 8e-61, Method: Composition-based stats.
Identities = 68/218 (31%), Positives = 114/218 (52%), Gaps = 3/218 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
++I LF++ L VK I+ +L FSI SW++IIQ++ R+ FE FWSG L
Sbjct: 1 MNILDLFLKASLLVKLIMLILIGFSIASWAIIIQRTRILNAAGREAEAFEDKFWSGIELS 60
Query: 71 TVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ + + + G IF S E+ + + +P + + R M +++ RELE +
Sbjct: 61 RLYQESQGRRDNLSGSEQIFYSGFKEFARLHRANSHAPEAVVEGASRAMRISMNRELENL 120
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
+ FLG++ S +G+ G V G+M F ++ + + PGI E+LI+ +GL
Sbjct: 121 ETHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMVAPGIAEALIATAIGLF 180
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ +AYN+ + K + + F EF+AIL RQ
Sbjct: 181 AAIPAVMAYNRLNQRVNKLELNYDNFMEEFTAILHRQA 218
>gi|309780837|ref|ZP_07675578.1| protein TolQ [Ralstonia sp. 5_7_47FAA]
gi|308920519|gb|EFP66175.1| protein TolQ [Ralstonia sp. 5_7_47FAA]
Length = 230
Score = 237 bits (606), Expect = 8e-61, Method: Composition-based stats.
Identities = 75/231 (32%), Positives = 121/231 (52%), Gaps = 6/231 (2%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
MN + D+SI +L + L V+ ++ LL + S+ SW+ I +K+ R Q FE
Sbjct: 1 MNPVEV-TQDLSIVSLVLHASLLVQFVMGLLLVMSLFSWTYIFRKAFALRAARSQTESFE 59
Query: 61 QLFWSGQSLETVCKSLKNHHNI--GLAAIFMSAMSEWKKSCD--KGARSPIGIQDRIDRM 116
+ FW+G L+ + +S N+ + L IF + M E+ K+ + +G P I D R
Sbjct: 60 RDFWAGGDLQALYQSAANNRHTTGALERIFEAGMREYLKARELQRGGGDPSAILDASRRA 119
Query: 117 MDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGI 175
M A RE++ + L FL S+ S +G+ G V G+M F+ ++ + PGI
Sbjct: 120 MRAAYQREMDSLEPHLPFLASVGSVSPYIGLFGTVWGIMNAFRGLSNVQQATLSAVAPGI 179
Query: 176 IESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
E+L++ +GL +IP+ IAYN++ + + A + E F EFS IL RQT
Sbjct: 180 AEALVATAIGLFAAIPAVIAYNRYATEIDRLANRFESFMEEFSNILQRQTR 230
>gi|91792749|ref|YP_562400.1| MotA/TolQ/ExbB proton channel [Shewanella denitrificans OS217]
gi|91714751|gb|ABE54677.1| MotA/TolQ/ExbB proton channel [Shewanella denitrificans OS217]
Length = 229
Score = 237 bits (606), Expect = 8e-61, Method: Composition-based stats.
Identities = 71/219 (32%), Positives = 111/219 (50%), Gaps = 3/219 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
+IS LF++ L VK ++ L SI+SW+VIIQ+ T + + FE FWSG L
Sbjct: 4 EISFIGLFLEASLLVKLVMLTLLGLSIMSWAVIIQRRKLLNTAKAKSARFEDTFWSGVDL 63
Query: 70 ETVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ K L + GL +F++ E+ + + P + D R M V+++RE+E+
Sbjct: 64 NRLYKELVARGDSIAGLECLFVAGFKEYSRLSKSSGKQPDAVMDGTSRAMRVSLSREIEK 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ L L ++ S +G+ G V G+M F +I + + + PGI E+LI+ +GL
Sbjct: 124 LENNLPLLATIGSTSPYIGLFGTVWGIMNSFIAIGTVQNATLAMVAPGIAEALIATAMGL 183
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ I YN+F K F EFS IL RQ
Sbjct: 184 FAAIPAVIGYNRFTTQVDKLETAYVNFMEEFSNILHRQA 222
>gi|304395716|ref|ZP_07377599.1| protein TolQ [Pantoea sp. aB]
gi|304357010|gb|EFM21374.1| protein TolQ [Pantoea sp. aB]
Length = 228
Score = 237 bits (606), Expect = 9e-61, Method: Composition-based stats.
Identities = 70/221 (31%), Positives = 113/221 (51%), Gaps = 3/221 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
+ D++I LF++ L VK I+ +L FSI SW++IIQ++ R+ FE FWSG
Sbjct: 1 MTDMNILDLFLKASLLVKLIMLILIGFSIASWAIIIQRTRILNAAGREAEAFEDKFWSGI 60
Query: 68 SLETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
L + + + G IF S E+ + +P + D R M +++ REL
Sbjct: 61 ELSRLYQESQERREELGGSEQIFYSGFKEFARLHRANNHAPEAVIDGASRAMRISMNREL 120
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILL 184
E + + FLG++ S +G+ G V G+M F ++ + + PGI E+LI+ +
Sbjct: 121 EALENHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMVAPGIAEALIATAI 180
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
GL +IP+ +AYN+ + K + F EF+AIL RQ
Sbjct: 181 GLFAAIPAVMAYNRLNQRVNKLEQGYDNFMEEFTAILHRQA 221
>gi|77464243|ref|YP_353747.1| biopolymer transport protein, TolQ [Rhodobacter sphaeroides 2.4.1]
gi|126463085|ref|YP_001044199.1| MotA/TolQ/ExbB proton channel [Rhodobacter sphaeroides ATCC 17029]
gi|221640127|ref|YP_002526389.1| MotA/TolQ/ExbB proton channel [Rhodobacter sphaeroides KD131]
gi|332559132|ref|ZP_08413454.1| MotA/TolQ/ExbB proton channel [Rhodobacter sphaeroides WS8N]
gi|77388661|gb|ABA79846.1| Biopolymer transport protein, TolQ [Rhodobacter sphaeroides 2.4.1]
gi|126104749|gb|ABN77427.1| MotA/TolQ/ExbB proton channel [Rhodobacter sphaeroides ATCC 17029]
gi|221160908|gb|ACM01888.1| MotA/TolQ/ExbB proton channel [Rhodobacter sphaeroides KD131]
gi|332276844|gb|EGJ22159.1| MotA/TolQ/ExbB proton channel [Rhodobacter sphaeroides WS8N]
Length = 232
Score = 237 bits (605), Expect = 9e-61, Method: Composition-based stats.
Identities = 81/231 (35%), Positives = 126/231 (54%), Gaps = 4/231 (1%)
Query: 1 MNNYGLAI---MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFR 57
M LA+ +D S+ ALF + L VK ++ LL + S SW++I++K + + RR+
Sbjct: 1 METETLAMAQEIDFSMLALFARATLTVKFVMILLIVMSFWSWAIIVRKHLLYRQARREAA 60
Query: 58 EFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMM 117
F++ FWSG+ L+ + + L IF + M EW++S G Q RIDR M
Sbjct: 61 IFDRAFWSGEPLDELFERLGPQPEGASEKIFAAGMLEWRRSHRNDGGLIAGAQSRIDRSM 120
Query: 118 DVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGII 176
VAI +E E + LSFL + S +G+ G V G+ F+ IA + N+ V PGI
Sbjct: 121 GVAIDKESETLNSGLSFLATTGSTAPFIGLFGTVWGIKHAFEQIAISQNTNLAVVAPGIA 180
Query: 177 ESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEG 227
E+L++ GL +IP+ + YNK DS++ + F++EF+ ILSRQ +
Sbjct: 181 EALLATAFGLVAAIPAVVFYNKLNADSERIIGGYDAFSDEFATILSRQLDA 231
>gi|146310893|ref|YP_001175967.1| colicin uptake protein TolQ [Enterobacter sp. 638]
gi|145317769|gb|ABP59916.1| Cell division and transport-associated protein TolQ [Enterobacter
sp. 638]
Length = 227
Score = 237 bits (605), Expect = 1e-60, Method: Composition-based stats.
Identities = 68/218 (31%), Positives = 112/218 (51%), Gaps = 3/218 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
++I LF++ L VK I+ +L FSI SW++IIQ++ R+ FE FWSG L
Sbjct: 1 MNILDLFLKASLLVKLIMLILIGFSIASWAIIIQRTRILNAASREAEAFEDKFWSGIELS 60
Query: 71 TVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ + + G IF S E+ + +P + + R M +++ RELE +
Sbjct: 61 RLYQESQGRRENLSGSEQIFYSGFKEFARLHRANNHAPEAVVEGASRAMRISMNRELETL 120
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
+ FLG++ S +G+ G V G+M F ++ + + PGI E+LI+ +GL
Sbjct: 121 ENHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMVAPGIAEALIATAIGLF 180
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ +AYN+ + K + + F EF+AIL RQ
Sbjct: 181 AAIPAVMAYNRLNQRVNKLELNYDNFMEEFTAILHRQA 218
>gi|323143604|ref|ZP_08078281.1| protein TolQ [Succinatimonas hippei YIT 12066]
gi|322416667|gb|EFY07324.1| protein TolQ [Succinatimonas hippei YIT 12066]
Length = 326
Score = 237 bits (605), Expect = 1e-60, Method: Composition-based stats.
Identities = 63/218 (28%), Positives = 112/218 (51%), Gaps = 3/218 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+S L + V+ ++ L S++SW++IIQ+S + R++ EFE+ FWSG L
Sbjct: 8 LSFTELVLNASFLVQLVMLFLLTLSVVSWTIIIQRSNQYKLGRKKADEFEEKFWSGIDLN 67
Query: 71 TVCKSL--KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ + + H IGL I+ + E+ + + G + D R M VA +RE+E +
Sbjct: 68 NLYQDCVKRQHSLIGLEVIYSAGFKEFVRLVNSGPADQEVVMDGTYRQMKVAASREIENL 127
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
L L ++ S +G+ G V G+M F ++A + + + P I E+LI+ +GL
Sbjct: 128 ETHLPTLATIGSISPYIGLFGTVWGIMHAFVALAAVKNATLSMVAPPIAEALIATAMGLF 187
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ + YN+F + + F +EF+ IL+R+
Sbjct: 188 AAIPAVMFYNRFTTKLEALENRYLNFMDEFATILNRRL 225
>gi|315634716|ref|ZP_07890000.1| TolQ colicin import protein [Aggregatibacter segnis ATCC 33393]
gi|315476664|gb|EFU67412.1| TolQ colicin import protein [Aggregatibacter segnis ATCC 33393]
Length = 229
Score = 237 bits (605), Expect = 1e-60, Method: Composition-based stats.
Identities = 68/222 (30%), Positives = 117/222 (52%), Gaps = 3/222 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
+++ LF++ + V+ +I +L FSI+SW++IIQ+S ++ FE FWSG+ L
Sbjct: 4 ELNFLDLFLKASIVVQLVILILVSFSIISWAIIIQRSRVLTKALKESMAFEDRFWSGEDL 63
Query: 70 ETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + L N + G IF E+ + +P I R M++++ RE+E+
Sbjct: 64 NKLYEGLSNRRDGLTGSEQIFYVGFKEFTRLKQANPDAPEAIIKGSTRAMNLSMNREIED 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
I ++ FL +++S +G+ G V G+M F S++G + + PGI E+LI+ +GL
Sbjct: 124 IETRVPFLATVASISPYIGLFGTVWGIMHAFMSLSGAKQATLQMVAPGIAEALIATAIGL 183
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
+IP+ +AYN+ K F +EF+ IL RQ G
Sbjct: 184 FAAIPAVMAYNRLSLRVNKLEQNYGNFIDEFTTILHRQVFGK 225
>gi|257465519|ref|ZP_05629890.1| colicin transport protein TolQ [Actinobacillus minor 202]
gi|257451179|gb|EEV25222.1| colicin transport protein TolQ [Actinobacillus minor 202]
Length = 226
Score = 237 bits (605), Expect = 1e-60, Method: Composition-based stats.
Identities = 68/218 (31%), Positives = 110/218 (50%), Gaps = 3/218 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+ +LF Q + VK +I +L FS+LSW++IIQ+S + FE FWSG+ L
Sbjct: 5 FDLVSLFAQASIVVKIVILILIAFSVLSWAIIIQRSRTLTKANKDSLAFEDKFWSGEDLN 64
Query: 71 TVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ + L+N + G IF E+ + + +P I R M++A+ RE+E +
Sbjct: 65 RLHEGLENRRDGLNGSEQIFYVGFKEFSRLQNANPEAPEAIIQGTSRAMNLALNREVEGL 124
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV-SIPGIIESLISILLGLC 187
+ FLG++ S +G+ G V G+M F ++ + PGI E+LI+ +GL
Sbjct: 125 ESYIPFLGTVGSISPYIGLFGTVWGIMHSFMGLSAVKQATLQSVAPGIAEALIATAIGLF 184
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ +AYN+ K F +EF+ IL RQ
Sbjct: 185 AAIPAVMAYNRLNLRVNKLEQNYANFIDEFTTILHRQV 222
>gi|182677271|ref|YP_001831417.1| protein TolQ [Beijerinckia indica subsp. indica ATCC 9039]
gi|182633154|gb|ACB93928.1| protein TolQ [Beijerinckia indica subsp. indica ATCC 9039]
Length = 241
Score = 237 bits (605), Expect = 1e-60, Method: Composition-based stats.
Identities = 89/232 (38%), Positives = 141/232 (60%), Gaps = 6/232 (2%)
Query: 1 MNNYGLA-----IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQ 55
MN LA + ++S+F++F + VK ++ L SI W++I+ K + F + R
Sbjct: 1 MNPADLASAAAPVTEVSLFSMFWSAHIIVKIVMLGLLGSSIWCWAIIVNKVLLFSKVDRD 60
Query: 56 FREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDR 115
FE +FWSG SL+ + +L G+A++F++ M EWK+S A S +G+Q RI++
Sbjct: 61 MARFEDIFWSGTSLDELYATLSAKPVSGMASLFVAGMREWKRSMQGAAHSFLGLQARIEK 120
Query: 116 MMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPG 174
+DV+IARE+E+ L L +++SAG VG+ G V G+M F+SIA + ++ V PG
Sbjct: 121 ALDVSIAREVEKYESSLLVLATVASAGPFVGLFGTVWGIMTAFRSIAASKNTSLAVVAPG 180
Query: 175 IIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
I E+L + +GL +IP+ IAYNK D + ++E FA+EFS+ILSRQ +
Sbjct: 181 IAEALFATAIGLFAAIPALIAYNKLQNDVARKQAKLESFADEFSSILSRQID 232
>gi|260779151|ref|ZP_05888043.1| MotA/TolQ/ExbB proton channel family protein [Vibrio
coralliilyticus ATCC BAA-450]
gi|260605315|gb|EEX31610.1| MotA/TolQ/ExbB proton channel family protein [Vibrio
coralliilyticus ATCC BAA-450]
Length = 232
Score = 237 bits (604), Expect = 1e-60, Method: Composition-based stats.
Identities = 72/219 (32%), Positives = 113/219 (51%), Gaps = 3/219 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
DIS+ LF+Q L VK ++ L SI+SW++II++S + FE FWSG L
Sbjct: 4 DISMLDLFLQASLLVKMVMLTLLGMSIVSWAMIIKRSKVLSQAAKGAETFEDKFWSGTDL 63
Query: 70 ETVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ ++ K + G IF S +E+ + A SP I + R M VA+ARE++E
Sbjct: 64 SVLYQNAKKRKDELEGTEEIFYSGFTEFARLRKSNADSPDFIMEGTGRAMRVAVAREVDE 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ L FL ++ S +G+ G V G+M F ++ + + PGI E+L++ +GL
Sbjct: 124 LETNLPFLATVGSISPYIGLFGTVWGIMHAFIALGEVKQATLAMVAPGIAEALVATAMGL 183
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ +AYN+ K F+ EF +IL RQ
Sbjct: 184 FAAIPAVMAYNRLSNKVGKLEHNYATFSEEFHSILHRQA 222
>gi|254362581|ref|ZP_04978678.1| TonB family auxiliary protein TolQ [Mannheimia haemolytica PHL213]
gi|261493431|ref|ZP_05989956.1| colicin transport protein, TolQ [Mannheimia haemolytica serotype A2
str. BOVINE]
gi|261496880|ref|ZP_05993248.1| colicin transport protein, TolQ [Mannheimia haemolytica serotype A2
str. OVINE]
gi|110735353|gb|ABG89247.1| TolQ [Mannheimia haemolytica]
gi|153094187|gb|EDN75074.1| TonB family auxiliary protein TolQ [Mannheimia haemolytica PHL213]
gi|261307404|gb|EEY08739.1| colicin transport protein, TolQ [Mannheimia haemolytica serotype A2
str. OVINE]
gi|261310925|gb|EEY12103.1| colicin transport protein, TolQ [Mannheimia haemolytica serotype A2
str. BOVINE]
Length = 226
Score = 237 bits (604), Expect = 1e-60, Method: Composition-based stats.
Identities = 68/220 (30%), Positives = 114/220 (51%), Gaps = 3/220 (1%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
+ S+ +LF++ + VK ++ +L +FSILSW+VIIQ+S ++ FE FWSG+
Sbjct: 3 TEFSLLSLFLEASIVVKIVMLILIVFSILSWAVIIQRSKILTKAKKDSLAFEDRFWSGED 62
Query: 69 LETVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
L + + L+N + G IF E+ + +P I R M++A+ RE+E
Sbjct: 63 LNRLHQGLENRRDALNGSEQIFYVGFKEFTRLQQANPDAPESIIQGSTRAMNLALNREME 122
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV-SIPGIIESLISILLG 185
+ + FLG++ S +G+ G V G+M F ++ + PGI E+LI+ +G
Sbjct: 123 SLENYIPFLGTVGSISPYIGLFGTVWGIMHSFMGLSAVKQATLQSVAPGIAEALIATAIG 182
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
L +IP+ +AYN+ K F +EF+ +L RQ
Sbjct: 183 LFAAIPAVMAYNRLNLRLGKVEQGYVNFIDEFTTLLHRQA 222
>gi|187927777|ref|YP_001898264.1| protein TolQ [Ralstonia pickettii 12J]
gi|187724667|gb|ACD25832.1| protein TolQ [Ralstonia pickettii 12J]
Length = 230
Score = 237 bits (604), Expect = 1e-60, Method: Composition-based stats.
Identities = 75/231 (32%), Positives = 121/231 (52%), Gaps = 6/231 (2%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
MN + D+SI +L + L V+ ++ LL + S+ SW+ I +K+ R Q FE
Sbjct: 1 MNPVEV-TQDLSIVSLVLHASLLVQFVMGLLLVMSLFSWTYIFRKAFALRAARSQTESFE 59
Query: 61 QLFWSGQSLETVCKSLKNHHNI--GLAAIFMSAMSEWKKSCD--KGARSPIGIQDRIDRM 116
+ FW+G L+ + +S N+ + L IF + M E+ K+ + +G P I D R
Sbjct: 60 RDFWAGGDLQALYQSAANNRHTTGALERIFEAGMREYLKARELQRGGGDPSAILDASRRA 119
Query: 117 MDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGI 175
M A RE++ + L FL S+ S +G+ G V G+M F+ ++ + PGI
Sbjct: 120 MRAAYQREMDSLESHLPFLASVGSVSPYIGLFGTVWGIMNAFRGLSNVQQATLSAVAPGI 179
Query: 176 IESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
E+L++ +GL +IP+ IAYN++ + + A + E F EFS IL RQT
Sbjct: 180 AEALVATAIGLFAAIPAVIAYNRYATEMDRLANRFESFMEEFSNILQRQTR 230
>gi|90022177|ref|YP_528004.1| peptidase A8, signal peptidase II [Saccharophagus degradans 2-40]
gi|89951777|gb|ABD81792.1| MotA/TolQ/ExbB proton channel [Saccharophagus degradans 2-40]
Length = 231
Score = 237 bits (604), Expect = 1e-60, Method: Composition-based stats.
Identities = 70/225 (31%), Positives = 124/225 (55%), Gaps = 5/225 (2%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+SI++L +Q + V+ ++ +LF+ S++SW +I+Q+ + + +++FE+ FWSG L
Sbjct: 6 LSIWSLIVQASVLVQIVMAILFLLSVVSWGLIVQRGLYQYHAKVAYKDFERQFWSGVDLT 65
Query: 71 TVCKS----LKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
+ + G+ IF + E+ + +G+ P I + R M VA+ARE E
Sbjct: 66 QLYRQGNSKANRSATDGVENIFRAGFKEFTRLRQQGSTDPDAIMEGTQRTMRVAMAREEE 125
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV-SIPGIIESLISILLG 185
++ L FL S++S +G+ G V G+M F+ +A + PGI E+L++ +G
Sbjct: 126 KLEVFLPFLASVASVSPYIGLFGTVWGIMNSFRGLATESQATLALVAPGISEALVATAMG 185
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
L +IP+ +AYN+F +++ + E FA EFSAIL RQ +
Sbjct: 186 LFAAIPAVLAYNRFSSNAESLISRYETFAEEFSAILHRQVHSKSA 230
>gi|292898895|ref|YP_003538264.1| TolQ colicin import protein [Erwinia amylovora ATCC 49946]
gi|291198743|emb|CBJ45852.1| TolQ colicin import protein [Erwinia amylovora ATCC 49946]
Length = 228
Score = 237 bits (604), Expect = 1e-60, Method: Composition-based stats.
Identities = 69/221 (31%), Positives = 113/221 (51%), Gaps = 3/221 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
+ D++I LF++ L VK I+ +L FSI SW+VIIQ++ R FE FWSG
Sbjct: 1 MTDMNILDLFLKASLLVKLIMLILIGFSIASWAVIIQRTRILNAAVRDADAFEDKFWSGI 60
Query: 68 SLETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
L + + ++ + G IF + E+ + +P + + R M +++ REL
Sbjct: 61 ELSRLYQESQSRRDELGGSEQIFYAGFKEFARLHRANNHAPEAVVEGATRAMRISMNREL 120
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILL 184
E + + FLG++ S +G+ G V G+M F ++ + + PGI E+LI+ +
Sbjct: 121 EALENHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMVAPGIAEALIATAI 180
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
GL +IP+ +AYN+ K + F EF+AIL RQ
Sbjct: 181 GLFAAIPAVMAYNRLTLRVNKLEQNYDNFMEEFTAILHRQA 221
>gi|152969305|ref|YP_001334414.1| colicin uptake protein TolQ [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|262041203|ref|ZP_06014415.1| TolQ colicin import protein [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|329998747|ref|ZP_08303201.1| protein TolQ [Klebsiella sp. MS 92-3]
gi|150954154|gb|ABR76184.1| inner membrane protein [Klebsiella pneumoniae subsp. pneumoniae MGH
78578]
gi|259041432|gb|EEW42491.1| TolQ colicin import protein [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|328538574|gb|EGF64678.1| protein TolQ [Klebsiella sp. MS 92-3]
Length = 227
Score = 237 bits (604), Expect = 1e-60, Method: Composition-based stats.
Identities = 69/218 (31%), Positives = 115/218 (52%), Gaps = 3/218 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
++I LF++ L VK I+ +L FSI SW++IIQ++ + R+ FE FWSG L
Sbjct: 1 MNILDLFLKASLLVKLIMLILIGFSIASWAIIIQRTRILNSAAREAEAFEDKFWSGIELS 60
Query: 71 TVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ + + + G IF S E+ + + +P I + R M +++ RELE +
Sbjct: 61 RLYQESQGRRDNLTGSEQIFYSGFKEFARLHRANSHAPEAIVEGASRAMRISMNRELETL 120
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
+ FLG++ S +G+ G V G+M F ++ + + PGI E+LI+ +GL
Sbjct: 121 ETHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMVAPGIAEALIATAIGLF 180
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ +AYN+ + K + + F EF+AIL RQ
Sbjct: 181 AAIPAVMAYNRLNQRVNKLELNYDNFMEEFTAILHRQA 218
>gi|53720371|ref|YP_109357.1| putative TolQ transport transmembrane protein [Burkholderia
pseudomallei K96243]
gi|76811339|ref|YP_334625.1| tolQ protein [Burkholderia pseudomallei 1710b]
gi|52210785|emb|CAH36769.1| putative TolQ transport transmembrane protein [Burkholderia
pseudomallei K96243]
gi|76580792|gb|ABA50267.1| tolQ protein [Burkholderia pseudomallei 1710b]
Length = 262
Score = 237 bits (604), Expect = 1e-60, Method: Composition-based stats.
Identities = 74/229 (32%), Positives = 120/229 (52%), Gaps = 7/229 (3%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
MN D+SI +L + + + ++ LL + S++SW+ I +K R Q FE
Sbjct: 38 MNT----SQDLSIISLVLNASVLAQAVMGLLLVLSLMSWTFIFRKWFAIRRARAQTERFE 93
Query: 61 QLFWSGQSLETVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMD 118
+ FWSG L+ + +S N+ + L IF S M E+ K+ +K P + D R M
Sbjct: 94 RDFWSGGDLQALYQSAANNRHTIGALERIFESGMREFLKAKEKRLSDPALLLDGARRAMR 153
Query: 119 VAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV-SIPGIIE 177
+ RE++ + LSFL S+ S +G+ G V G+M F+ +A + PGI E
Sbjct: 154 ASFQREMDVLESNLSFLASVGSVSPYIGLFGTVWGIMNSFRGLANVQQATLANVAPGIAE 213
Query: 178 SLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+L++ +GL +IP+ +AYN++ D + A++ E F EFS IL RQ +
Sbjct: 214 ALVATAIGLFAAIPAVVAYNRYAHDIDRLAIRFETFIEEFSNILQRQAQ 262
>gi|317491194|ref|ZP_07949630.1| TolQ protein [Enterobacteriaceae bacterium 9_2_54FAA]
gi|316920741|gb|EFV42064.1| TolQ protein [Enterobacteriaceae bacterium 9_2_54FAA]
Length = 227
Score = 237 bits (604), Expect = 1e-60, Method: Composition-based stats.
Identities = 69/226 (30%), Positives = 113/226 (50%), Gaps = 3/226 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
+ D+++F LF++ L VK I+ +L FSI SW++IIQ++ R FE FWSG
Sbjct: 1 MTDMNMFDLFLKASLLVKLIMLVLVCFSIASWAIIIQRTRILNAATRDAEAFEDKFWSGI 60
Query: 68 SLETVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
L + + + + G IF S E+ + + + G+ + R M +++ RE+
Sbjct: 61 ELSRLYQESQTRRDSLTGSEQIFHSGFKEFARLHRVNSHAADGVIEGATRAMRISLNREV 120
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILL 184
E + + FLG++ S +G+ G V G+M F + + + PGI E+LI+ +
Sbjct: 121 EGLETHIPFLGTVGSISPYIGLFGTVWGIMHAFIGLGAVKQATLQMVAPGIAEALIATAI 180
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
GL +IP+ +AYN+ + K F EF AIL RQ S
Sbjct: 181 GLFAAIPAVMAYNRLNQRVNKLEQNYTNFMEEFIAILHRQAFATES 226
>gi|145297811|ref|YP_001140652.1| MotA/TolQ/ExbB proton channel [Aeromonas salmonicida subsp.
salmonicida A449]
gi|142850583|gb|ABO88904.1| MotA/TolQ/ExbB proton channel [Aeromonas salmonicida subsp.
salmonicida A449]
Length = 229
Score = 237 bits (604), Expect = 1e-60, Method: Composition-based stats.
Identities = 67/219 (30%), Positives = 109/219 (49%), Gaps = 3/219 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
+IS LF Q L VK ++ L S++SW++I Q+S +FE FWSG L
Sbjct: 4 EISFIGLFWQASLLVKLVMMTLMGMSVVSWALIFQRSKVIKAANLASEQFEDRFWSGVDL 63
Query: 70 ETVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + + + G+ IF S E+ + GAR + D R M V+++R ++E
Sbjct: 64 NRLYQESSSRRDDIEGMEDIFYSGFKEYARLLKAGARGQDAVMDGTYRAMRVSLSRAVDE 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
+ L L ++ S +G+ G V G+M F ++ + + PGI E+LI+ +GL
Sbjct: 124 LESNLPVLATVGSISPYIGLFGTVWGIMNAFIALGQVQQATLQMVAPGIAEALIATAMGL 183
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ I YN+F +K F +EF+ IL+RQ
Sbjct: 184 FAAIPAVIFYNRFTNKVEKLENAYANFMDEFTTILNRQI 222
>gi|257095748|ref|YP_003169389.1| protein TolQ [Candidatus Accumulibacter phosphatis clade IIA str.
UW-1]
gi|257048272|gb|ACV37460.1| protein TolQ [Candidatus Accumulibacter phosphatis clade IIA str.
UW-1]
Length = 225
Score = 237 bits (604), Expect = 1e-60, Method: Composition-based stats.
Identities = 68/221 (30%), Positives = 109/221 (49%), Gaps = 3/221 (1%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
D+SI L + V+ ++ LL S +SW I +K R Q +FE+ FWSG
Sbjct: 5 QDLSILHLILNASAVVQAVMLLLAGVSFMSWYYIFRKWFTVKAARAQTEQFERDFWSGGD 64
Query: 69 LETVCKSL--KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
L ++ +S H + IF + E+ K + P + D R M RE++
Sbjct: 65 LNSLYQSAINDRHSTGNMERIFEAGFREFTKLRSQKNLDPKDVIDGSRRAMRATYQREMD 124
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLG 185
I L+FL S+ S VG+ G V G+M F+ ++ + ++ PGI E+L++ +G
Sbjct: 125 SIDSHLAFLASVGSVSPYVGLFGTVWGIMHSFRGLSNVGQATLAAVAPGIAEALVATAIG 184
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
L +IP+ +AYN+F + + + + E F EFS IL RQ
Sbjct: 185 LFAAIPAVVAYNRFAHEIDRLSSRFESFMEEFSNILQRQMR 225
>gi|254475158|ref|ZP_05088544.1| protein TolQ [Ruegeria sp. R11]
gi|214029401|gb|EEB70236.1| protein TolQ [Ruegeria sp. R11]
Length = 231
Score = 237 bits (604), Expect = 1e-60, Method: Composition-based stats.
Identities = 84/219 (38%), Positives = 126/219 (57%), Gaps = 1/219 (0%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
+D S++ LF + + VK ++ +L SI SW++I+QK +N+ RR+ EF++ FWSG+
Sbjct: 12 IDFSMWGLFERATVTVKLVMVMLVASSIWSWAIILQKLINYRQARREAAEFDRAFWSGEP 71
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
L+ + + IF + M+EW++S G Q RI+R MDVAIA+E E +
Sbjct: 72 LDGLFDDIGPQPKGQSQRIFAAGMTEWRRSHRTDGALIAGAQARIERSMDVAIAKESESV 131
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
LS L ++ S VG+ G V G+M F IA + N+ V PGI E+L++ LGL
Sbjct: 132 QSGLSILATIGSTAPFVGLFGTVWGIMTAFIEIAEQQNTNLAVVAPGIAEALMATGLGLL 191
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ I YNK DS + E FA+EF+ ILSRQ +
Sbjct: 192 AAIPAVIFYNKLSADSDRIIGSYEAFADEFATILSRQLD 230
>gi|145634619|ref|ZP_01790328.1| long-chain-fatty-acid--CoA ligase [Haemophilus influenzae PittAA]
gi|145640340|ref|ZP_01795924.1| TolQ [Haemophilus influenzae R3021]
gi|145268164|gb|EDK08159.1| long-chain-fatty-acid--CoA ligase [Haemophilus influenzae PittAA]
gi|145274926|gb|EDK14788.1| TolQ [Haemophilus influenzae 22.4-21]
Length = 228
Score = 236 bits (603), Expect = 2e-60, Method: Composition-based stats.
Identities = 67/222 (30%), Positives = 116/222 (52%), Gaps = 3/222 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
+++ LF++ + V+ +I +L FSI+SW++IIQ+S ++ R FE FWSG+ L
Sbjct: 4 ELNFLDLFLKASIVVQLVIVILISFSIISWAIIIQRSRILTNALKEARTFEDRFWSGEDL 63
Query: 70 ETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + L N + G IF E+ + +P I R M++A+ RE+E
Sbjct: 64 NKLYEGLSNRRDGLTGSEQIFCVGFKEFSRLKQVNPDAPEAIIKGTTRAMNLAMNREIES 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
+ ++ FL +++S +G+ G V G+M F +++G + + PGI E+LI+ +GL
Sbjct: 124 LENRVPFLATVASVSPYIGLFGTVWGIMHAFMALSGAKQATLQMVAPGIAEALIATAIGL 183
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
+IP+ +AYN+ F +EF+ IL RQ G
Sbjct: 184 FAAIPAVMAYNRLSLRVNAIEQDYVNFIDEFTTILHRQAFGK 225
>gi|332530155|ref|ZP_08406104.1| transmembrane protein/ biopolymer transport [Hylemonella gracilis
ATCC 19624]
gi|332040425|gb|EGI76802.1| transmembrane protein/ biopolymer transport [Hylemonella gracilis
ATCC 19624]
Length = 231
Score = 236 bits (603), Expect = 2e-60, Method: Composition-based stats.
Identities = 68/224 (30%), Positives = 113/224 (50%), Gaps = 2/224 (0%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
D SI L + V+ ++ +L SI SW+ I K +R +FEQ FWSG +
Sbjct: 3 QDFSIIQLVLHASWVVQAVMLILLCGSIASWAAIFSKHFGLKKVRASNEKFEQDFWSGAN 62
Query: 69 LETVCKSLKNHHNIG-LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
L T+ + G + IF++ + E++K ++ + D R M ++ RE++
Sbjct: 63 LNTLYAQAAQKSDSGPMERIFVAGLREYQKLRERRVTDNSALLDGARRAMRASMQREMDS 122
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ LSFL ++ S +G+ G V G+M F +A + ++ PGI E+L++ +GL
Sbjct: 123 VESNLSFLATVGSVSPYIGLFGTVWGIMHAFTGLASMQQVTLATVAPGIAEALVATAIGL 182
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
+IP+ +AYN+F D + A +E F EFS IL R G +
Sbjct: 183 FAAIPAVVAYNRFARDIDRVANAVETFIEEFSNILQRNISGQQA 226
>gi|300715886|ref|YP_003740689.1| TolQ colicin import protein [Erwinia billingiae Eb661]
gi|299061722|emb|CAX58838.1| TolQ colicin import protein [Erwinia billingiae Eb661]
Length = 225
Score = 236 bits (603), Expect = 2e-60, Method: Composition-based stats.
Identities = 67/218 (30%), Positives = 111/218 (50%), Gaps = 3/218 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
++I LF++ L VK I+ +L FSI SW++IIQ++ R FE FWSG L
Sbjct: 1 MNILDLFLKASLLVKLIMLILIGFSIASWAIIIQRTRILNAAGRDADAFEDKFWSGIELS 60
Query: 71 TVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ + + + G IF S E+ + +P + + R M +++ RE+E +
Sbjct: 61 RLYQESQARRDELGGSEQIFYSGFKEFARLHRANNHAPEAVVEGATRAMRISLNREMEAL 120
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
+ FLG++ S +G+ G V G+M F ++ + + PGI E+LI+ +GL
Sbjct: 121 ENHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMVAPGIAEALIATAIGLF 180
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ +AYN+ + K + F EF+AIL RQ
Sbjct: 181 AAIPAVMAYNRLNQRVNKLEQNYDNFMEEFTAILHRQA 218
>gi|261341327|ref|ZP_05969185.1| protein TolQ [Enterobacter cancerogenus ATCC 35316]
gi|288316632|gb|EFC55570.1| protein TolQ [Enterobacter cancerogenus ATCC 35316]
Length = 227
Score = 236 bits (603), Expect = 2e-60, Method: Composition-based stats.
Identities = 68/218 (31%), Positives = 113/218 (51%), Gaps = 3/218 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
++I LF++ L VK I+ +L FSI SW++IIQ++ R+ FE FWSG L
Sbjct: 1 MNILDLFLKASLLVKLIMLILIGFSIASWAIIIQRTRILNAASREAEAFEDKFWSGIELS 60
Query: 71 TVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ + + + G IF S E+ + +P + + R M +++ RELE +
Sbjct: 61 RLYQESQGRRDNLAGSEQIFYSGFKEFARLHRANNHAPEAVVEGASRAMRISMNRELETL 120
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
+ FLG++ S +G+ G V G+M F ++ + + PGI E+LI+ +GL
Sbjct: 121 ETHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMVAPGIAEALIATAIGLF 180
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ +AYN+ + K + + F EF+AIL RQ
Sbjct: 181 AAIPAVMAYNRLNQRVNKLELNYDNFMEEFTAILHRQA 218
>gi|240948552|ref|ZP_04752925.1| colicin transport protein TolQ [Actinobacillus minor NM305]
gi|240297060|gb|EER47631.1| colicin transport protein TolQ [Actinobacillus minor NM305]
Length = 226
Score = 236 bits (603), Expect = 2e-60, Method: Composition-based stats.
Identities = 68/218 (31%), Positives = 110/218 (50%), Gaps = 3/218 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+ +LF Q + VK +I +L FS+LSW++IIQ+S + FE FWSG+ L
Sbjct: 5 FDLVSLFAQASIVVKIVILILIAFSVLSWAIIIQRSRTLTKANKDSLAFEDKFWSGEDLN 64
Query: 71 TVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ + L+N + G IF E+ + + +P I R M++A+ RE+E +
Sbjct: 65 RLHEGLENRRDGLNGSEQIFYVGFKEFSRLQNANPEAPEAIIQGTSRAMNLALNREVEGL 124
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV-SIPGIIESLISILLGLC 187
+ FLG++ S +G+ G V G+M F ++ + PGI E+LI+ +GL
Sbjct: 125 ESYIPFLGTVGSISPYIGLFGTVWGIMHSFMGLSAVKQATLQSVAPGIAEALIATAIGLF 184
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ +AYN+ K F +EF+ IL RQ
Sbjct: 185 AAIPAVMAYNRLNLRVNKLEQNYANFIDEFTTILHRQV 222
>gi|322514839|ref|ZP_08067858.1| TolQ colicin import protein [Actinobacillus ureae ATCC 25976]
gi|322119221|gb|EFX91362.1| TolQ colicin import protein [Actinobacillus ureae ATCC 25976]
Length = 226
Score = 236 bits (603), Expect = 2e-60, Method: Composition-based stats.
Identities = 72/220 (32%), Positives = 114/220 (51%), Gaps = 3/220 (1%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
D ++ +LFMQ + VK +I +L FSILSW+VIIQ+S ++ FE FWSG+
Sbjct: 3 TDFNLVSLFMQASIVVKIVILILITFSILSWAVIIQRSRVLTAAKKDALAFENKFWSGED 62
Query: 69 LETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
L + + L+N + G IF + E+ + A +P R M++A+ RE+E
Sbjct: 63 LHRLHEGLENRRDGLSGSEQIFYAGFKEYMRLQQVNADAPEATMKGSSRAMNLALNREIE 122
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV-SIPGIIESLISILLG 185
+ + FLG++ S +G+ G V G+M F ++ + PGI E+LI+ +G
Sbjct: 123 NLESYIPFLGTVGSISPYIGLFGTVWGIMHSFMGLSAVKQATLQSVAPGIAEALIATAIG 182
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
L +IP+ +AYN+ K F +EF+ IL RQ
Sbjct: 183 LFAAIPAVMAYNRLSLRVNKLEQDYANFIDEFTTILHRQA 222
>gi|167623619|ref|YP_001673913.1| Tol-Pal system TolQ [Shewanella halifaxensis HAW-EB4]
gi|167353641|gb|ABZ76254.1| Tol-Pal system TolQ [Shewanella halifaxensis HAW-EB4]
Length = 229
Score = 236 bits (603), Expect = 2e-60, Method: Composition-based stats.
Identities = 76/219 (34%), Positives = 115/219 (52%), Gaps = 3/219 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
DIS LF+Q L VK ++ L SI SW+VIIQ+ + +FE FWSG L
Sbjct: 4 DISFIGLFLQASLLVKFVMLTLLSLSIASWAVIIQRRKLLNAAKNDALKFEDKFWSGVDL 63
Query: 70 ETVCKSL--KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + L + N GL A+F++ E+ + R P + D R M V+++RELE+
Sbjct: 64 NKLYQELSARQDSNTGLEALFVTGFKEYARLNKLNGRVPEAVMDGSYRAMRVSLSRELEK 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ L L ++ S +G+ G V G+M F ++ + + + PGI E+LI+ +GL
Sbjct: 124 LETHLPLLATIGSTSPYIGLFGTVWGIMNSFIALGAVENATLAMVAPGIAEALIATAMGL 183
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ IAYN+F +K M F EFS+IL RQ
Sbjct: 184 FAAIPAVIAYNRFSTQVEKIEMSYANFMEEFSSILHRQA 222
>gi|320539142|ref|ZP_08038813.1| membrane spanning protein in TolA-TolQ-TolR complex [Serratia
symbiotica str. Tucson]
gi|320030780|gb|EFW12788.1| membrane spanning protein in TolA-TolQ-TolR complex [Serratia
symbiotica str. Tucson]
Length = 227
Score = 236 bits (603), Expect = 2e-60, Method: Composition-based stats.
Identities = 68/221 (30%), Positives = 113/221 (51%), Gaps = 3/221 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
+ D++I LF++ L VK I+ +L FS+ SW++IIQ++ R FE FWSG
Sbjct: 1 MTDMNILDLFLKASLLVKLIMLILICFSVASWAIIIQRTRILNAATRDAEAFEDKFWSGV 60
Query: 68 SLETVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
L + + + + G IF + E+ + +P + + R M +++ REL
Sbjct: 61 ELSRLYQESQARRDSLTGSEQIFYAGFKEFARLHRANKHAPESVIEGALRAMRISMNREL 120
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILL 184
E + +SFLG++ S +G+ G V G+M F ++ + + PGI E+LI+ +
Sbjct: 121 EALENHISFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLHMVAPGIAEALIATAI 180
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
GL +IP+ +AYN+ + K F EF+AIL RQ
Sbjct: 181 GLFAAIPAVMAYNRLNQRVNKIEQNYGNFMEEFTAILHRQA 221
>gi|332993886|gb|AEF03941.1| tolQ protein [Alteromonas sp. SN2]
Length = 230
Score = 236 bits (603), Expect = 2e-60, Method: Composition-based stats.
Identities = 71/218 (32%), Positives = 111/218 (50%), Gaps = 3/218 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D++ LF+Q V+ ++ LL S+ SW+ I Q+S + R + R+FE FWSG L
Sbjct: 4 DLTFIGLFLQASFIVQLVMLLLLGVSVASWTFIFQRSKALSSAREEMRQFEDKFWSGADL 63
Query: 70 ETVCKSLKNHHN-IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ + L N G+ IF + E+ + + I D R M V ++R++EE+
Sbjct: 64 NRLYQELSARPNLSGIGTIFCAGFKEFVRLRKSNTGTN-AIVDGTYRSMRVTMSRQVEEL 122
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLC 187
+L FL + S +G+ G V G+M F ++ + + PGI E+LI+ +GL
Sbjct: 123 ESRLPFLATAGSISPYIGLFGTVWGIMNAFIALGEVQQATLAMVAPGIAEALIATAIGLF 182
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ IAYN+F +K F EFSAIL RQ
Sbjct: 183 AAIPAVIAYNRFSHQVEKLENSYGNFMEEFSAILHRQA 220
>gi|146276611|ref|YP_001166770.1| MotA/TolQ/ExbB proton channel [Rhodobacter sphaeroides ATCC 17025]
gi|145554852|gb|ABP69465.1| MotA/TolQ/ExbB proton channel [Rhodobacter sphaeroides ATCC 17025]
Length = 232
Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats.
Identities = 83/231 (35%), Positives = 126/231 (54%), Gaps = 4/231 (1%)
Query: 1 MNNYGLAI---MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFR 57
M LA+ +D S+ ALF + L VK ++ LL + S SW++II+K + + RR+
Sbjct: 1 METETLAMAQEIDFSMLALFARATLTVKVVMILLIVMSFWSWAIIIRKHLLYRQARREAA 60
Query: 58 EFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMM 117
F++ FWSG+ L+ + + L IF + M EW++S G Q RIDR M
Sbjct: 61 IFDRAFWSGEPLDELFERLGPQPEGASEKIFAAGMLEWRRSHRTDGGLIAGAQSRIDRSM 120
Query: 118 DVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGII 176
VAI +E E + LSFL + S +G+ G V G+ F+ IA + N+ V PGI
Sbjct: 121 GVAIDKESETLNAGLSFLATTGSTAPFIGLFGTVWGIKHAFEQIAISQNTNLAVVAPGIA 180
Query: 177 ESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEG 227
E+L++ GL +IP+ + YNK DS++ E F++EF+ ILSRQ +
Sbjct: 181 EALLATAFGLVAAIPAVVFYNKLNADSERIIGGYEAFSDEFATILSRQLDA 231
>gi|323496597|ref|ZP_08101650.1| hypothetical protein VISI1226_13296 [Vibrio sinaloensis DSM 21326]
gi|323318343|gb|EGA71301.1| hypothetical protein VISI1226_13296 [Vibrio sinaloensis DSM 21326]
Length = 232
Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats.
Identities = 69/219 (31%), Positives = 111/219 (50%), Gaps = 3/219 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
+IS+ LF+Q L VK ++ L SI SW++II++S + FE FWSG L
Sbjct: 4 EISMLDLFLQASLLVKMVMLTLLGMSIASWAMIIKRSKVLSQAAKDAEAFEDKFWSGTDL 63
Query: 70 ETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + + + G IF S +E+ + + SP I + R M VA+ARE++E
Sbjct: 64 AVLYQKAQKRKDELAGTEEIFYSGFTEFARLRKSNSDSPDFIMEGTGRSMRVAVAREVDE 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ L FL ++ S +G+ G V G+M F ++ + + PGI E+L++ +GL
Sbjct: 124 LETNLPFLATVGSISPYIGLFGTVWGIMHAFIALGEVKQATLAMVAPGIAEALVATAMGL 183
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ +AYN+ K F+ EF +IL RQ
Sbjct: 184 FAAIPAVMAYNRLSNKVGKLEHNYATFSEEFHSILHRQA 222
>gi|227114772|ref|ZP_03828428.1| colicin uptake protein TolQ [Pectobacterium carotovorum subsp.
brasiliensis PBR1692]
Length = 225
Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats.
Identities = 68/218 (31%), Positives = 113/218 (51%), Gaps = 3/218 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+++F LF++ L VK I+ +L FSI SW++IIQ++ + R+ FE FWSG L
Sbjct: 1 MNVFDLFLKASLLVKLIMLILICFSIASWAIIIQRTRILNSATREAEAFEDKFWSGIELS 60
Query: 71 TVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ + + + G IF S E+ + + +P + + R M +++ RELE +
Sbjct: 61 RLYQESQTRRDSLTGTEQIFHSGFKEFARLHRANSHAPEAVVEGASRAMRISMNRELETL 120
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
+ FLG++ S +G+ G V G+M F ++ + + PGI E+LI+ +GL
Sbjct: 121 ETHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMVAPGIAEALIATAIGLF 180
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ +AYN+ K + F EF AIL RQ
Sbjct: 181 AAIPAVMAYNRLSLRVGKLEQNYDNFTEEFIAILHRQA 218
>gi|283833966|ref|ZP_06353707.1| protein TolQ [Citrobacter youngae ATCC 29220]
gi|291070097|gb|EFE08206.1| protein TolQ [Citrobacter youngae ATCC 29220]
Length = 227
Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats.
Identities = 68/218 (31%), Positives = 114/218 (52%), Gaps = 3/218 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
++I LF++ L VK I+ +L FSI SW++IIQ++ R+ FE FWSG L
Sbjct: 1 MNILDLFLKASLLVKLIMLILIGFSIASWAIIIQRTRILNAASREAEAFEDKFWSGIELS 60
Query: 71 TVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ + + + G IF S E+ + + +P + + R M +++ RELE +
Sbjct: 61 RLYQESQGRRDNLAGSEQIFYSGFKEFARLHRANSHAPEAVVEGASRAMRISMNRELETL 120
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
+ FLG++ S +G+ G V G+M F ++ + + PGI E+LI+ +GL
Sbjct: 121 ETHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMVAPGIAEALIATAIGLF 180
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ +AYN+ + K + + F EF+AIL RQ
Sbjct: 181 AAIPAVMAYNRLNQRVNKLELNYDNFMEEFTAILHRQA 218
>gi|157374993|ref|YP_001473593.1| MotA/TolQ/ExbB proton channel [Shewanella sediminis HAW-EB3]
gi|157317367|gb|ABV36465.1| MotA/TolQ/ExbB proton channel [Shewanella sediminis HAW-EB3]
Length = 229
Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats.
Identities = 73/219 (33%), Positives = 114/219 (52%), Gaps = 3/219 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
DIS LF+Q L VK ++ L S++SW+VIIQ+ T ++ +FE FWSG L
Sbjct: 4 DISFIGLFLQASLLVKFVMLTLLSLSVISWAVIIQRRRLLTTAKQSSIKFEDRFWSGVDL 63
Query: 70 ETVCKSLKNHH--NIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ K + N GL A+F + E+ + + P + D R M V+++RE+E+
Sbjct: 64 NKLYKEISARQDGNEGLEALFHTGFKEYARLSKLNGKVPAAVMDGSYRAMRVSLSREMEK 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ L L ++ S +G+ G V G+M F ++ + + + PGI E+LI+ +GL
Sbjct: 124 LETHLPLLATIGSTSPYIGLFGTVWGIMNSFIALGAVENATLAMVAPGIAEALIATAMGL 183
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ IAYN+F M F EFS+IL RQ
Sbjct: 184 FAAIPAVIAYNRFTTQVDSIEMSYANFMEEFSSILHRQA 222
>gi|85706714|ref|ZP_01037806.1| proton transporter TolQ [Roseovarius sp. 217]
gi|85668772|gb|EAQ23641.1| proton transporter TolQ [Roseovarius sp. 217]
Length = 231
Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats.
Identities = 81/219 (36%), Positives = 120/219 (54%), Gaps = 1/219 (0%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
MD S++ALF + VK ++ +L + S SWS+IIQK + + R + F++ FWSG+
Sbjct: 12 MDFSMWALFARATFIVKLVMFMLIVASFWSWSIIIQKIIVYRKARLEAEIFDRRFWSGEP 71
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
L+ + + IF + M EW++S G RIDR MDVAIA+E E +
Sbjct: 72 LDGLFDEIGPDPAGQSERIFAAGMMEWRRSHRNDGNLIAGATARIDRSMDVAIAKESEGL 131
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
L L ++ S +G+ G V G+M F IA + N+ V PGI E+L++ LGL
Sbjct: 132 QSGLQVLATVGSTAPFIGLFGTVWGIMHAFIEIAEQQNTNLAVVAPGIAEALLATGLGLI 191
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ I YNK D+ + E FA+EF+ ILSRQ +
Sbjct: 192 AAIPAVIFYNKLSADADRIVAGYEAFADEFATILSRQLD 230
>gi|15602835|ref|NP_245907.1| hypothetical protein PM0970 [Pasteurella multocida subsp. multocida
str. Pm70]
gi|12721295|gb|AAK03054.1| TolQ [Pasteurella multocida subsp. multocida str. Pm70]
Length = 229
Score = 235 bits (601), Expect = 3e-60, Method: Composition-based stats.
Identities = 70/222 (31%), Positives = 117/222 (52%), Gaps = 3/222 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D++ LF++ + V+ +I +L IFSI+SW++IIQ+S + FE FWSG+ L
Sbjct: 4 DLNFLELFLKASIVVQFVIVILIIFSIMSWAIIIQRSRILTKALKDSAAFEDRFWSGEDL 63
Query: 70 ETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ L+N + G IF E+ + +P I R M++A+ RE+EE
Sbjct: 64 NRLFDGLENKRDGLSGSEQIFYVGFKEFSRLKQANPNAPEAIIQGSSRAMNLAMNREVEE 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
+ ++ FL +++S +G+ G V G+M F +++G + + PGI E+LI+ +GL
Sbjct: 124 LETRVPFLATVASISPYIGLFGTVWGIMHAFMALSGAKQATLQMVAPGIAEALIATAIGL 183
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
+IP+ +AYN+ K F +EF+ IL RQ G
Sbjct: 184 FAAIPAVMAYNRLSLRVSKLEQNYGNFIDEFTTILHRQAFGK 225
>gi|188534423|ref|YP_001908220.1| colicin uptake protein TolQ [Erwinia tasmaniensis Et1/99]
gi|188029465|emb|CAO97342.1| TolQ colicin import protein [Erwinia tasmaniensis Et1/99]
Length = 228
Score = 235 bits (601), Expect = 3e-60, Method: Composition-based stats.
Identities = 69/221 (31%), Positives = 112/221 (50%), Gaps = 3/221 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
+ D++I LF++ L VK I+ +L FSI SW+VIIQ++ R FE FWSG
Sbjct: 1 MTDMNILDLFLKASLLVKLIMLILIGFSIASWAVIIQRTRILNAAVRDADAFEDKFWSGM 60
Query: 68 SLETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
L + + + + G IF + E+ + +P + + R M +++ REL
Sbjct: 61 ELSRLYQESQVRRDELGGSEQIFYAGFKEFARLHRANNHAPEAVVEGATRAMRISMNREL 120
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILL 184
E + + FLG++ S +G+ G V G+M F ++ + + PGI E+LI+ +
Sbjct: 121 ETLENHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMVAPGIAEALIATAI 180
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
GL +IP+ +AYN+ K + F EF+AIL RQ
Sbjct: 181 GLFAAIPAVMAYNRLTLRVNKLEQNYDNFMEEFTAILHRQA 221
>gi|167855028|ref|ZP_02477802.1| colicin transport protein TolQ [Haemophilus parasuis 29755]
gi|167853876|gb|EDS25116.1| colicin transport protein TolQ [Haemophilus parasuis 29755]
Length = 226
Score = 235 bits (601), Expect = 3e-60, Method: Composition-based stats.
Identities = 71/224 (31%), Positives = 114/224 (50%), Gaps = 3/224 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
+ ++ +LFM+ + VK +I +L FS+LSW+VIIQ+S ++ FE FWSG+
Sbjct: 2 ATEFNLVSLFMEASIVVKLVILILISFSVLSWAVIIQRSRVLTRAKKDSLNFEDRFWSGE 61
Query: 68 SLETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
L + + L++ + G IF E+ + SP I R M++A+ REL
Sbjct: 62 DLHRLHEGLEHRRDGLTGAEHIFYVGFKEFNRLQQANPDSPESIIQGSSRAMNLALNREL 121
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV-SIPGIIESLISILL 184
EE+ + FLG++ S +G+ G V G+M F ++ + PGI E+LI+ +
Sbjct: 122 EELENYIPFLGTVGSISPYIGLFGTVWGIMHSFMGLSAVKQATLQSVAPGIAEALIATAI 181
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
GL +IP+ +AYN+ K F +EF+ IL RQ
Sbjct: 182 GLFAAIPAVMAYNRLNLRVGKLEQNYVNFIDEFTTILHRQAFAK 225
>gi|114327767|ref|YP_744924.1| tolQ protein [Granulibacter bethesdensis CGDNIH1]
gi|114315941|gb|ABI62001.1| tolQ protein [Granulibacter bethesdensis CGDNIH1]
Length = 241
Score = 235 bits (601), Expect = 3e-60, Method: Composition-based stats.
Identities = 84/225 (37%), Positives = 125/225 (55%), Gaps = 3/225 (1%)
Query: 7 AIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG 66
A D+S+ LF+Q VK ++ LL SI W+V I K V+ R FE FWSG
Sbjct: 16 AGGDLSLLGLFLQADAIVKIVMLLLLFASIWVWAVAIDKYVSLRRANRAADAFEDRFWSG 75
Query: 67 QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARS--PIGIQDRIDRMMDVAIARE 124
SL+ + ++ +AA+F +AM EW+++ G+++R DR M V I RE
Sbjct: 76 GSLDELYETEGAKPTNPIAAVFGAAMGEWRRTARIAGTDFSRSGVRERTDRAMGVTIGRE 135
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISIL 183
++ + + FL S+ S +G+ G V G+M F SIA ++ N+ V PGI E+L +
Sbjct: 136 MDRLERWMVFLASVGSTAPFIGLFGTVWGIMNSFSSIAAMHNTNLSVVAPGIAEALFATA 195
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
+GL +IP+ + YNK D +FA ++E FA EF AILSRQ+E
Sbjct: 196 MGLVAAIPAVLIYNKLSTDMARFAARLEAFAAEFGAILSRQSEER 240
>gi|283479099|emb|CAY75015.1| Protein tolQ [Erwinia pyrifoliae DSM 12163]
Length = 228
Score = 235 bits (601), Expect = 3e-60, Method: Composition-based stats.
Identities = 69/221 (31%), Positives = 113/221 (51%), Gaps = 3/221 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
+ D++I LF++ L VK I+ +L FSI SW+VIIQ++ R FE FWSG
Sbjct: 1 MTDMNILDLFLKASLLVKLIMLILIGFSIASWAVIIQRTRILNAAVRDADAFEDKFWSGI 60
Query: 68 SLETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
L + + ++ + G IF + E+ + +P + + R M +++ REL
Sbjct: 61 ELSRLYQESQSRRDELGGSEQIFFAGFKEFARLHRANNHAPEAVVEGATRAMRISMNREL 120
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILL 184
E + + FLG++ S +G+ G V G+M F ++ + + PGI E+LI+ +
Sbjct: 121 EALENHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMVAPGIAEALIATAI 180
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
GL +IP+ +AYN+ K + F EF+AIL RQ
Sbjct: 181 GLFAAIPAVMAYNRLTLRVNKLEQNYDNFMEEFTAILHRQA 221
>gi|217969216|ref|YP_002354450.1| protein TolQ [Thauera sp. MZ1T]
gi|217506543|gb|ACK53554.1| protein TolQ [Thauera sp. MZ1T]
Length = 222
Score = 235 bits (601), Expect = 3e-60, Method: Composition-based stats.
Identities = 72/220 (32%), Positives = 114/220 (51%), Gaps = 2/220 (0%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
D+SI +L Q + V+ ++ LL S++SW I +K+ R Q EFE+ FWSG
Sbjct: 4 THDLSILSLISQASVLVQLVMALLASLSLVSWYWIFRKAFQIRQARAQTDEFERDFWSGG 63
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
L T+ +S H + G+ IF + E+ K KG D R M RE+++
Sbjct: 64 DLNTLYESAGRHQSEGMERIFEAGYREFTKLRGKG-HDHGATLDGARRAMRATYQREIDD 122
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV-SIPGIIESLISILLGL 186
+ L+FL S+ S +G+LG V G+M F+ ++ + + PGI E+L++ +GL
Sbjct: 123 LEAHLAFLASVGSVSPYIGLLGTVWGIMNSFRGLSSVGAATLAQVAPGIAEALVATAIGL 182
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ +AYN+F D + ++ E F EFS IL R
Sbjct: 183 FAAIPAVVAYNRFAHDIDRLGIRFESFMEEFSNILQRNLR 222
>gi|300692240|ref|YP_003753235.1| protein tolQ, essential components of the Tol-Pal system [Ralstonia
solanacearum PSI07]
gi|299079300|emb|CBJ51972.1| Protein tolQ, essential components of the Tol-Pal system [Ralstonia
solanacearum PSI07]
Length = 230
Score = 235 bits (601), Expect = 3e-60, Method: Composition-based stats.
Identities = 75/231 (32%), Positives = 121/231 (52%), Gaps = 6/231 (2%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
MN + D+SI +L + L V+ ++ LL + S+ SW+ I +K+ R Q FE
Sbjct: 1 MNPVEV-TQDLSIVSLVLHASLLVQFVMGLLLVMSLFSWTYIFRKAFALRAARSQTESFE 59
Query: 61 QLFWSGQSLETVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDK--GARSPIGIQDRIDRM 116
+ FW+G L+ + +S N+ + L IF + M E+ K+ ++ G P I D R
Sbjct: 60 RDFWAGGDLQAMYQSAANNRHNTGALERIFEAGMREFLKTREQQRGIGDPSAILDASRRA 119
Query: 117 MDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGI 175
M A RE++ + L FL S+ S +G+ G V G+M F+ ++ + PGI
Sbjct: 120 MRAAYQREMDSLESHLPFLASVGSVSPYIGLFGTVWGIMNAFRGLSNVQQATLSAVAPGI 179
Query: 176 IESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
E+L++ +GL +IP+ IAYN++ + + A + E F EFS IL RQT
Sbjct: 180 AEALVATAIGLFAAIPAVIAYNRYATEMDRLANRFESFMEEFSNILQRQTR 230
>gi|84388526|ref|ZP_00991073.1| TolQ protein [Vibrio splendidus 12B01]
gi|84377075|gb|EAP93946.1| TolQ protein [Vibrio splendidus 12B01]
Length = 227
Score = 235 bits (600), Expect = 3e-60, Method: Composition-based stats.
Identities = 70/219 (31%), Positives = 113/219 (51%), Gaps = 3/219 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
+ISI L ++ L VK ++ +L S++SW++II++S +Q FE FWSG L
Sbjct: 4 EISILGLILEASLLVKMVMLILMGMSVVSWAMIIKRSKVLSQASKQTDVFEDKFWSGVDL 63
Query: 70 ETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + + G IF + +E+ + A SP I + R M VA+ARE++E
Sbjct: 64 AKLYQESNKRKDELSGTEEIFYAGFTEFARLRKSNATSPDFIMEGTGRAMRVAVAREVDE 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ L FL ++ S +G+ G V G+M F ++ + + PGI E+LI+ +GL
Sbjct: 124 LETNLPFLATVGSISPYIGLFGTVWGIMHSFIALGEVKQATLAMVAPGIAEALIATAMGL 183
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ +AYN+F K F+ EF +IL RQ
Sbjct: 184 FAAIPAVMAYNRFSSRVGKLEHNYATFSEEFHSILHRQA 222
>gi|53804467|ref|YP_113690.1| tolQ protein [Methylococcus capsulatus str. Bath]
gi|53758228|gb|AAU92519.1| tolQ protein [Methylococcus capsulatus str. Bath]
Length = 225
Score = 235 bits (600), Expect = 4e-60, Method: Composition-based stats.
Identities = 63/220 (28%), Positives = 111/220 (50%), Gaps = 3/220 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
++SI L + V+ ++ +L S++SW+ I K + FE FWSG L
Sbjct: 4 ELSIITLIKEASPVVQIVMFILVAASVISWTFIFGKYREIRRAEQTSIAFEDRFWSGIDL 63
Query: 70 ETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + L + GL IF++ E+ + + P + + R M VA+ REL++
Sbjct: 64 ADLYRQLATESDDCGGLELIFLAGFKEFGRLRQQSGIMPEAVMEGTQRAMRVALNRELDK 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ E+L FL ++ S +G+ G V G+M F+S+ + + PGI E+L++ +GL
Sbjct: 124 LDERLPFLATVGSTSPYIGLFGTVWGIMNSFRSLGSVKQATLAMVAPGISEALVATAMGL 183
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ IAYN++ + + A + E F E ++L RQ
Sbjct: 184 FAAIPAVIAYNRYSTNISRLANRYESFTEELLSLLHRQAH 223
>gi|156934769|ref|YP_001438685.1| colicin uptake protein TolQ [Cronobacter sakazakii ATCC BAA-894]
gi|156533023|gb|ABU77849.1| hypothetical protein ESA_02609 [Cronobacter sakazakii ATCC BAA-894]
Length = 231
Score = 235 bits (600), Expect = 4e-60, Method: Composition-based stats.
Identities = 68/218 (31%), Positives = 113/218 (51%), Gaps = 3/218 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
++I LF++ L VK I+ +L FSI SW++IIQ++ R+ FE FWSG L
Sbjct: 1 MNILDLFLKASLLVKLIMLILIGFSIASWAIIIQRTRILNAASREAEAFEDKFWSGIELS 60
Query: 71 TVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ + + G IF + E+ + + +P I + R M +++ RELE +
Sbjct: 61 RLYQESQGRRENLSGSEQIFYAGFKEFARLHRANSHAPEAIVEGASRAMRISMNRELETL 120
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
+ FLG++ S +G+ G V G+M F ++ + + PGI E+LI+ +GL
Sbjct: 121 ETHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMVAPGIAEALIATAIGLF 180
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ +AYN+ + K + + F EF+AIL RQ
Sbjct: 181 AAIPAVMAYNRLNQRVNKLELNYDNFMEEFTAILHRQA 218
>gi|220935400|ref|YP_002514299.1| TolQ protein [Thioalkalivibrio sp. HL-EbGR7]
gi|219996710|gb|ACL73312.1| TolQ protein [Thioalkalivibrio sp. HL-EbGR7]
Length = 228
Score = 235 bits (600), Expect = 4e-60, Method: Composition-based stats.
Identities = 67/222 (30%), Positives = 119/222 (53%), Gaps = 2/222 (0%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
+D+S++ L ++ V+ ++ +L + S+LSW+V+I K R EFE+ FWSG
Sbjct: 3 VDLSLYRLILEASFIVQLVMLILVVMSVLSWTVMIIKWRVLRDTRAATDEFEERFWSGVD 62
Query: 69 LETVCKSLKNHHN-IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
L + + ++ GL +FM+ E+ + + + + R M VA++RE++
Sbjct: 63 LAHLYEGIRRKSEVTGLEHVFMAGFKEFLRGRKHRSDRGATLGESAQRSMRVAVSREVDG 122
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ LSFL ++ S +G+ G V G+M F ++G + + PGI E+LI+ LGL
Sbjct: 123 LESYLSFLATVGSTSPYIGLFGTVWGIMHAFIGLSGAQQATLAMVAPGIAEALIATALGL 182
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
+IP+ IAYN+F +D + + + F EF+++L RQ
Sbjct: 183 FAAIPAVIAYNRFSDDVDRIVTRYDNFTEEFTSLLQRQAPAT 224
>gi|162146625|ref|YP_001601084.1| protein TolQ [Gluconacetobacter diazotrophicus PAl 5]
gi|209543383|ref|YP_002275612.1| protein TolQ [Gluconacetobacter diazotrophicus PAl 5]
gi|161785200|emb|CAP54746.1| putative protein tolQ [Gluconacetobacter diazotrophicus PAl 5]
gi|209531060|gb|ACI50997.1| protein TolQ [Gluconacetobacter diazotrophicus PAl 5]
Length = 238
Score = 235 bits (600), Expect = 4e-60, Method: Composition-based stats.
Identities = 80/229 (34%), Positives = 125/229 (54%), Gaps = 3/229 (1%)
Query: 3 NYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQL 62
N G A +S+++LF+ + VK ++ L S++ W +I K V + RQ FE
Sbjct: 9 NLGAAASGLSLWSLFLHAAIVVKLVMIGLVFSSVVVWGIIFDKIVTLRRVNRQAGVFEDK 68
Query: 63 FWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARS--PIGIQDRIDRMMDVA 120
FWSG SL+ + ++ LAA+F +AM EW++S G+Q+R+DR M++
Sbjct: 69 FWSGGSLDDLYETDGAKPVHPLAAVFGAAMGEWRRSSRISGVDLARGGVQERVDRAMNIT 128
Query: 121 IARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESL 179
I RE+E + + FL ++ +G+ G V G+M F +IA ++ N+ V PGI E+L
Sbjct: 129 ITREMERLGRWMIFLATIGPVAPFIGLFGTVWGIMHAFGAIAAMHNTNLAVVAPGISEAL 188
Query: 180 ISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
+ +GL +IP+ IAYN F +M F EF+AILSRQ+E
Sbjct: 189 FATAIGLVTAIPAVIAYNVINNSLSLFEDRMAAFGTEFAAILSRQSEER 237
>gi|312882594|ref|ZP_07742334.1| hypothetical protein VIBC2010_09537 [Vibrio caribbenthicus ATCC
BAA-2122]
gi|309369754|gb|EFP97266.1| hypothetical protein VIBC2010_09537 [Vibrio caribbenthicus ATCC
BAA-2122]
Length = 232
Score = 235 bits (600), Expect = 4e-60, Method: Composition-based stats.
Identities = 65/222 (29%), Positives = 112/222 (50%), Gaps = 3/222 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D S+ L ++ V+ ++ +L S++SW++II++S + FE FWSG L
Sbjct: 4 DTSMLDLILKASFLVQLVMMILLGMSVISWAMIIKRSKVLSKAAKDADSFEDKFWSGADL 63
Query: 70 ETVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ ++ K + G IF S +E+ + + SP + + R M VA+ARE+++
Sbjct: 64 SILYQNAKKRKDDLMGTEEIFYSGFTEFARLRKSNSDSPDFVMEGTGRAMRVAVAREVDD 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ L FL ++ S +G+ G V G+M F + + ++ PGI E+LI+ +GL
Sbjct: 124 LEANLPFLATVGSISPYIGLFGTVWGIMHAFMELGQVKQATLATVAPGIAEALIATAMGL 183
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
+IP+ +AYN+ K F+ EF +IL RQ N
Sbjct: 184 FAAIPAVMAYNRLSNKVGKLEHNYATFSEEFHSILHRQAMAN 225
>gi|16272333|ref|NP_438546.1| colicin transport protein [Haemophilus influenzae Rd KW20]
gi|68248988|ref|YP_248100.1| hypothetical protein NTHI0505 [Haemophilus influenzae 86-028NP]
gi|145628745|ref|ZP_01784545.1| TolQ [Haemophilus influenzae 22.1-21]
gi|145636347|ref|ZP_01792016.1| long-chain-fatty-acid--CoA ligase [Haemophilus influenzae PittHH]
gi|148825333|ref|YP_001290086.1| long-chain-fatty-acid--CoA ligase [Haemophilus influenzae PittEE]
gi|229844452|ref|ZP_04464592.1| long-chain-fatty-acid--CoA ligase [Haemophilus influenzae 6P18H1]
gi|229846472|ref|ZP_04466580.1| long-chain-fatty-acid--CoA ligase [Haemophilus influenzae 7P49H1]
gi|260580552|ref|ZP_05848380.1| TolQ protein [Haemophilus influenzae RdAW]
gi|260582351|ref|ZP_05850144.1| TolQ protein [Haemophilus influenzae NT127]
gi|319775686|ref|YP_004138174.1| membrane spanning protein in TolA-TolQ-TolR complex [Haemophilus
influenzae F3047]
gi|319898093|ref|YP_004136290.1| membrane spanning protein in tola-tolq-tolr complex [Haemophilus
influenzae F3031]
gi|329122260|ref|ZP_08250848.1| TolQ colicin import protein [Haemophilus aegyptius ATCC 11116]
gi|1174730|sp|P43768|TOLQ_HAEIN RecName: Full=Protein tolQ
gi|1573355|gb|AAC22043.1| colicin transport protein (tolQ) [Haemophilus influenzae Rd KW20]
gi|68057187|gb|AAX87440.1| TolQ [Haemophilus influenzae 86-028NP]
gi|144979215|gb|EDJ88901.1| TolQ [Haemophilus influenzae 22.1-21]
gi|145270512|gb|EDK10446.1| long-chain-fatty-acid--CoA ligase [Haemophilus influenzae PittHH]
gi|148715493|gb|ABQ97703.1| long-chain-fatty-acid--CoA ligase [Haemophilus influenzae PittEE]
gi|229810565|gb|EEP46283.1| long-chain-fatty-acid--CoA ligase [Haemophilus influenzae 7P49H1]
gi|229812701|gb|EEP48390.1| long-chain-fatty-acid--CoA ligase [Haemophilus influenzae 6P18H1]
gi|260092894|gb|EEW76829.1| TolQ protein [Haemophilus influenzae RdAW]
gi|260094719|gb|EEW78614.1| TolQ protein [Haemophilus influenzae NT127]
gi|301169087|emb|CBW28684.1| membrane spanning protein in TolA-TolQ-TolR complex [Haemophilus
influenzae 10810]
gi|317433599|emb|CBY81983.1| membrane spanning protein in TolA-TolQ-TolR complex [Haemophilus
influenzae F3031]
gi|317450277|emb|CBY86493.1| membrane spanning protein in TolA-TolQ-TolR complex [Haemophilus
influenzae F3047]
gi|327473821|gb|EGF19238.1| TolQ colicin import protein [Haemophilus aegyptius ATCC 11116]
Length = 228
Score = 235 bits (600), Expect = 4e-60, Method: Composition-based stats.
Identities = 67/222 (30%), Positives = 116/222 (52%), Gaps = 3/222 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
+++ LF++ + V+ +I +L FSI+SW++IIQ+S ++ R FE FWSG+ L
Sbjct: 4 ELNFLDLFLKASIVVQLVIVILISFSIISWAIIIQRSRILTNALKEARTFEDRFWSGEDL 63
Query: 70 ETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + L N + G IF E+ + +P I R M++A+ RE+E
Sbjct: 64 NKLYEGLSNRRDGLTGSEQIFCVGFKEFSRLKQVNPDAPEAIIKGTMRAMNLAMNREIES 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
+ ++ FL +++S +G+ G V G+M F +++G + + PGI E+LI+ +GL
Sbjct: 124 LENRVPFLATVASVSPYIGLFGTVWGIMHAFMALSGAKQATLQMVAPGIAEALIATAIGL 183
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
+IP+ +AYN+ F +EF+ IL RQ G
Sbjct: 184 FAAIPAVMAYNRLSLRVNAIEQDYGNFIDEFTTILHRQAFGK 225
>gi|160872695|ref|ZP_02062827.1| protein TolQ [Rickettsiella grylli]
gi|159121494|gb|EDP46832.1| protein TolQ [Rickettsiella grylli]
Length = 233
Score = 235 bits (599), Expect = 4e-60, Method: Composition-based stats.
Identities = 68/227 (29%), Positives = 116/227 (51%), Gaps = 4/227 (1%)
Query: 6 LAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS 65
++ +D S+++ F VKC++ +L + SILSWS+I Q R++ +FE FWS
Sbjct: 1 MSTIDPSLWSYFSAASGIVKCVMFILLVASILSWSMIFQYGFILRRSRKRLAQFENKFWS 60
Query: 66 GQSLETVCKSL--KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAR 123
G L + L + GLA+IF + E+ + + P I + + R M +A +
Sbjct: 61 GIELSKLYTELNREQEQQNGLASIFHAGFREFVRLDQHVSDVPAVIMEGVQRAMRIAYSE 120
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVS--IPGIIESLIS 181
+ + + + L FL ++ S +G+ G V G+M F +++ ++ PGI E+L++
Sbjct: 121 QHQLLEKHLDFLATLGSTSPYIGLFGTVWGIMTAFHALSASQQTATIAMVAPGIAEALVA 180
Query: 182 ILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
+GL V+IP+ I YN++ + F EFS IL RQ GN
Sbjct: 181 TAMGLFVAIPAVIFYNRYAHQIQHLLHHYHRFQEEFSTILYRQIHGN 227
>gi|46143832|ref|ZP_00133961.2| COG0811: Biopolymer transport proteins [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|126207784|ref|YP_001053009.1| colicin transport protein TolQ [Actinobacillus pleuropneumoniae
L20]
gi|307245113|ref|ZP_07527206.1| hypothetical protein appser1_3230 [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|307249516|ref|ZP_07531503.1| hypothetical protein appser4_3270 [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|307254069|ref|ZP_07535916.1| hypothetical protein appser9_3240 [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|307258524|ref|ZP_07540261.1| hypothetical protein appser11_3250 [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
gi|126096576|gb|ABN73404.1| colicin transport protein TolQ [Actinobacillus pleuropneumoniae
serovar 5b str. L20]
gi|306854002|gb|EFM86214.1| hypothetical protein appser1_3230 [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|306858371|gb|EFM90440.1| hypothetical protein appser4_3270 [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|306862994|gb|EFM94941.1| hypothetical protein appser9_3240 [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|306867428|gb|EFM99279.1| hypothetical protein appser11_3250 [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
Length = 226
Score = 235 bits (599), Expect = 4e-60, Method: Composition-based stats.
Identities = 70/220 (31%), Positives = 113/220 (51%), Gaps = 3/220 (1%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
+ ++ +LFMQ + VK +I +L FSILSW+VIIQ+S ++ FE FWSG+
Sbjct: 3 TEFNLVSLFMQASIVVKIVILILISFSILSWAVIIQRSRVLTEAKKNALAFENKFWSGED 62
Query: 69 LETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
L + + L+N + G IF + E+ + +P R M++A+ RE+E
Sbjct: 63 LHRLHEGLENRRDGLNGSEQIFYAGFKEYMRLQQVNPDAPEATMKGSSRAMNLALNREVE 122
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV-SIPGIIESLISILLG 185
+ + FLG++ S +G+ G V G+M F ++ + PGI E+LI+ +G
Sbjct: 123 NLESYIPFLGTVGSISPYIGLFGTVWGIMHSFMGLSAVKQATLQSVAPGIAEALIATAIG 182
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
L +IP+ +AYN+ K F +EF+ IL RQ
Sbjct: 183 LFAAIPAVMAYNRLSLRVNKLEQDYANFIDEFTTILHRQA 222
>gi|117618590|ref|YP_858097.1| protein TolQ [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
gi|117559997|gb|ABK36945.1| protein TolQ [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
Length = 229
Score = 235 bits (599), Expect = 4e-60, Method: Composition-based stats.
Identities = 67/219 (30%), Positives = 110/219 (50%), Gaps = 3/219 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
+IS LF Q L VK ++ L S++SW++IIQ+S +FE FWSG L
Sbjct: 4 EISFIGLFWQASLLVKLVMMTLMGMSVVSWALIIQRSKAIKAANLASEQFEDRFWSGVDL 63
Query: 70 ETVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + + + G+ IF S E+ + GAR + D R M V+++R ++E
Sbjct: 64 NRLYQESSSRRDDIEGMEDIFYSGFKEYARLLKAGARGQDAVMDGTYRAMRVSLSRAVDE 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
+ L L ++ S +G+ G V G+M F ++ + + PGI E+LI+ +GL
Sbjct: 124 LESNLPVLATIGSISPYIGLFGTVWGIMNAFIALGQVQQATLQMVAPGIAEALIATAMGL 183
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ I YN+F ++ F +EF+ IL+RQ
Sbjct: 184 FAAIPAVIFYNRFSNKVERLENAYANFMDEFTTILNRQI 222
>gi|290474102|ref|YP_003466978.1| inner membrane protein required for outer membrane integrity,
uptake of group A colicins and phage DNA [Xenorhabdus
bovienii SS-2004]
gi|289173411|emb|CBJ80188.1| inner membrane protein required for outer membrane integrity,
uptake of group A colicins and phage DNA [Xenorhabdus
bovienii SS-2004]
Length = 226
Score = 235 bits (599), Expect = 5e-60, Method: Composition-based stats.
Identities = 68/218 (31%), Positives = 112/218 (51%), Gaps = 3/218 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
++I LF++ G V+ I+ +L FSI+SW++IIQ++ R+ FE FWSG L
Sbjct: 1 MNILDLFLKAGFLVQLIMLILIGFSIVSWAIIIQRTRILNAATREAEAFEDKFWSGIELS 60
Query: 71 TVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ K ++ + G IF S E+ + + P + R M +++ RELE +
Sbjct: 61 RLYKESQSRRDSLNGTEQIFHSGFKEFARLHQVNSHVPEAVITGASRAMRISMNRELETV 120
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
+ FLG++ S +G+ G V G+M F ++ + + PGI E+LI+ +GL
Sbjct: 121 ENHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMVAPGIAEALIATAIGLF 180
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ +AYN+ + K + F EF AIL RQ
Sbjct: 181 AAIPAVMAYNRLSQRVNKLEQIYDNFMEEFLAILHRQA 218
>gi|264679474|ref|YP_003279381.1| MotA/TolQ/ExbB proton channel [Comamonas testosteroni CNB-2]
gi|299530556|ref|ZP_07043976.1| MotA/TolQ/ExbB proton channel [Comamonas testosteroni S44]
gi|262209987|gb|ACY34085.1| MotA/TolQ/ExbB proton channel [Comamonas testosteroni CNB-2]
gi|298721532|gb|EFI62469.1| MotA/TolQ/ExbB proton channel [Comamonas testosteroni S44]
Length = 234
Score = 235 bits (599), Expect = 5e-60, Method: Composition-based stats.
Identities = 78/228 (34%), Positives = 116/228 (50%), Gaps = 3/228 (1%)
Query: 6 LAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS 65
+ D+SI +L MQ V+ ++ +L I SI SW+ I +K+ +R FEQ FWS
Sbjct: 1 MNSQDMSILSLIMQASWVVQLVMLILVIASIASWATIFRKAQTLKRVRSLNDNFEQDFWS 60
Query: 66 GQSLETVCKSLKNHHNIG--LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAR 123
G SL + S + G + IF S M E++K ++ + D R M + R
Sbjct: 61 GTSLNDLYASAAQNAKTGGPMERIFASGMREYQKLRERRIGDVATLMDGTRRAMRASFQR 120
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISI 182
EL+EI LSFLG+++S VG+ G V G+M F A + ++ PGI E+L++
Sbjct: 121 ELDEIESGLSFLGTVASVSPYVGLFGTVWGVMHAFTGFANMEQITLATVAPGIAEALVAT 180
Query: 183 LLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
+GL +IP+ AYN++ + A Q E F EFS IL R S
Sbjct: 181 AMGLFAAIPAVTAYNRYAHHIDRIASQEETFIEEFSNILQRNVGATAS 228
>gi|284007873|emb|CBA73790.1| biopolymer transport protein [Arsenophonus nasoniae]
Length = 224
Score = 235 bits (599), Expect = 5e-60, Method: Composition-based stats.
Identities = 68/218 (31%), Positives = 110/218 (50%), Gaps = 3/218 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
++I LF++ V+ I+ +L FSI SW++IIQ+S R+ FE FWSG L
Sbjct: 1 MNILDLFLKASFLVQLIMLILIGFSIASWAIIIQRSKILNAATRETEAFEDRFWSGIELS 60
Query: 71 TVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ K + + G IF S E+ + +P + + R M +++ RELE +
Sbjct: 61 RLYKECQARRDSLTGSEQIFYSGFKEFARLRQANLHTPEAVMNGASRAMRISMNRELESL 120
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
+ FLG++ S +G+ G V G+M F ++ + + PGI E+LI+ +GL
Sbjct: 121 EAHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGSVKQATLQMVAPGIAEALIATAIGLF 180
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ +AYN+ + K + F EF AIL RQ
Sbjct: 181 AAIPAVMAYNRLNQRVNKLEQSYDNFMEEFLAILHRQA 218
>gi|165975757|ref|YP_001651350.1| colicin transport protein [Actinobacillus pleuropneumoniae serovar
3 str. JL03]
gi|165875858|gb|ABY68906.1| colicin transport protein [Actinobacillus pleuropneumoniae serovar
3 str. JL03]
Length = 226
Score = 235 bits (599), Expect = 5e-60, Method: Composition-based stats.
Identities = 70/220 (31%), Positives = 114/220 (51%), Gaps = 3/220 (1%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
+ ++ +LFMQ + VK +I +L FSILSW+VIIQ+S ++ FE FWSG+
Sbjct: 3 TEFNLVSLFMQASIVVKIVILILISFSILSWAVIIQRSRVLTEAKKNALAFENKFWSGED 62
Query: 69 LETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
L + + L+N + G IF + E+ + +P R M++A+ RE+E
Sbjct: 63 LHRLHEGLENRRDGLNGSEQIFYAGFKEYMRLQQVNPDAPEATMKGSSRAMNLALNREVE 122
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV-SIPGIIESLISILLG 185
++ + FLG++ S +G+ G V G+M F ++ + PGI E+LI+ +G
Sbjct: 123 DLESYIPFLGTVGSISPYIGLFGTVWGIMHSFMGLSAVKQATLQSVAPGIAEALIATAIG 182
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
L +IP+ +AYN+ K F +EF+ IL RQ
Sbjct: 183 LFAAIPAVMAYNRLSLRVNKLEQDYANFIDEFTTILHRQA 222
>gi|300704853|ref|YP_003746456.1| protein tolq, essential components of the tol-pal system [Ralstonia
solanacearum CFBP2957]
gi|299072517|emb|CBJ43867.1| Protein tolQ, essential components of the Tol-Pal system [Ralstonia
solanacearum CFBP2957]
Length = 230
Score = 234 bits (598), Expect = 6e-60, Method: Composition-based stats.
Identities = 76/231 (32%), Positives = 120/231 (51%), Gaps = 6/231 (2%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
MN + D+SI +L + L V+ ++ LL + S+ SW+ I +K+ R Q FE
Sbjct: 1 MNPAEV-TQDLSIVSLVLHASLLVQFVMGLLLVMSLFSWTYIFRKAFALRAARSQTESFE 59
Query: 61 QLFWSGQSLETVCKSLKN--HHNIGLAAIFMSAMSEWKKSCDK--GARSPIGIQDRIDRM 116
+ FW+G L+ + +S N H L IF + M E+ K+ ++ G P I D R
Sbjct: 60 RDFWAGGDLQAMYQSAANNRHRTGALERIFEAGMREFLKTREQQRGIGDPSAILDASRRA 119
Query: 117 MDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGI 175
M A RE++ + L FL S+ S +G+ G V G+M F+ ++ + PGI
Sbjct: 120 MRAAYQREMDSLESHLPFLASVGSVSPYIGLFGTVWGIMNAFRGLSNVQQATLSAVAPGI 179
Query: 176 IESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
E+L++ +GL +IP+ IAYN++ + + A + E F EFS IL RQT
Sbjct: 180 AEALVATAIGLFAAIPAVIAYNRYATEMDRLANRFESFMEEFSNILQRQTR 230
>gi|262276106|ref|ZP_06053915.1| MotA/TolQ/ExbB proton channel family protein [Grimontia hollisae
CIP 101886]
gi|262219914|gb|EEY71230.1| MotA/TolQ/ExbB proton channel family protein [Grimontia hollisae
CIP 101886]
Length = 228
Score = 234 bits (598), Expect = 6e-60, Method: Composition-based stats.
Identities = 65/219 (29%), Positives = 111/219 (50%), Gaps = 3/219 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
++SI LF+Q L VK ++ +L SI+SW++II++S + FE FWSG L
Sbjct: 4 ELSILDLFLQASLLVKAVMLVLLGMSIVSWTMIIKRSQVLSEAFTKAERFEDRFWSGVDL 63
Query: 70 ETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + ++ + G IF S E+ + + P + + R M V++++E+E
Sbjct: 64 SQLFQEVQARKDKLSGSEQIFYSGFKEFARLHRSNGKVPEAVMEGTSRAMRVSLSKEVES 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ L FL ++ S +G+ G V G+M F ++ + + PGI E+L++ +GL
Sbjct: 124 LETNLPFLATVGSISPYIGLFGTVWGIMHAFIALGAVKQATLAMVAPGIAEALVATAMGL 183
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ +AYN+ K F EFS+IL RQ
Sbjct: 184 FAAIPAVMAYNRLTSKVGKLENNYINFMEEFSSILHRQA 222
>gi|145630444|ref|ZP_01786225.1| long-chain-fatty-acid--CoA ligase [Haemophilus influenzae R3021]
gi|144984179|gb|EDJ91616.1| long-chain-fatty-acid--CoA ligase [Haemophilus influenzae R3021]
Length = 228
Score = 234 bits (598), Expect = 6e-60, Method: Composition-based stats.
Identities = 67/222 (30%), Positives = 116/222 (52%), Gaps = 3/222 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
+++ LF++ + V+ +I +L FSI+SW++IIQ+S ++ R FE FWSG+ L
Sbjct: 4 ELNFLDLFLKASIVVQLVIVILISFSIISWAIIIQRSRILTNALKEARTFEDRFWSGEDL 63
Query: 70 ETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + L N + G IF E+ + +P I R M++A+ RE+E
Sbjct: 64 NKLYEGLSNRRDGLTGSEQIFCVGFKEFSRLKQVNPDAPEAIIKGTMRAMNLAMNREIES 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
+ ++ FL +++S +G+ G V G+M F +++G + + PGI E+LI+ +GL
Sbjct: 124 LENRVPFLATVASVSPYIGLFGTVWGIMHAFMALSGAKQATLQMVAPGIAEALIATAIGL 183
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
+IP+ +AYN+ F +EF+ IL RQ G
Sbjct: 184 FAAIPAVMAYNRLSLRVNAIEQDYVNFIDEFTTILHRQAFGK 225
>gi|114319407|ref|YP_741090.1| MotA/TolQ/ExbB proton channel [Alkalilimnicola ehrlichii MLHE-1]
gi|114225801|gb|ABI55600.1| Cell division and transport-associated protein TolQ
[Alkalilimnicola ehrlichii MLHE-1]
Length = 235
Score = 234 bits (598), Expect = 6e-60, Method: Composition-based stats.
Identities = 66/221 (29%), Positives = 118/221 (53%), Gaps = 3/221 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
++SI L ++ L V+ ++ +L + S+ SW++I K FE+ FWSG +L
Sbjct: 4 ELSITHLVLEASLLVQLVMLILVLASVSSWALIFLKRATIRKAHDGAVHFEERFWSGGNL 63
Query: 70 ETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + ++ H GL IF S E+ + + +P + + R M V+++RE+++
Sbjct: 64 AEIYRQIREPHPDHGGLERIFRSGFKEFTRMRKQTGTAPGTMVEASHRAMRVSLSREMDD 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ L FL ++ S VG+ G V G+M F+++ + ++ PGI E+LI+ LGL
Sbjct: 124 LERHLPFLATVGSVSPYVGLFGTVWGIMNSFRALGEMQQATLATVAPGIAEALIATALGL 183
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEG 227
+IP+ IAYN++ ++ + E F EF++IL R T G
Sbjct: 184 FAAIPAVIAYNQYANQVERLINRYETFVEEFTSILQRNTHG 224
>gi|86146490|ref|ZP_01064813.1| TolQ protein [Vibrio sp. MED222]
gi|218709107|ref|YP_002416728.1| TolQ protein [Vibrio splendidus LGP32]
gi|85835753|gb|EAQ53888.1| TolQ protein [Vibrio sp. MED222]
gi|218322126|emb|CAV18240.1| TolQ protein [Vibrio splendidus LGP32]
Length = 227
Score = 234 bits (598), Expect = 6e-60, Method: Composition-based stats.
Identities = 70/219 (31%), Positives = 113/219 (51%), Gaps = 3/219 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
+ISI L ++ L VK ++ +L S++SW++II++S +Q FE FWSG L
Sbjct: 4 EISILGLILEASLLVKMVMLILMGMSVVSWAMIIKRSKVLSQATKQTDVFEDKFWSGVDL 63
Query: 70 ETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + + G IF + +E+ + A SP I + R M VA+ARE++E
Sbjct: 64 AKLYQESNKRKDELSGTEEIFYAGFTEFARLRKSNAASPDFIMEGTGRAMRVAVAREVDE 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ L FL ++ S +G+ G V G+M F ++ + + PGI E+LI+ +GL
Sbjct: 124 LETNLPFLATVGSISPYIGLFGTVWGIMHSFIALGEVKQATLAMVAPGIAEALIATAMGL 183
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ +AYN+F K F+ EF +IL RQ
Sbjct: 184 FAAIPAVMAYNRFSSRVGKLEHNYATFSEEFHSILHRQA 222
>gi|219870348|ref|YP_002474723.1| colicin transport protein/biopolymer transport protein, membrane
spanning protein in TolA-TolQ-TolR complex [Haemophilus
parasuis SH0165]
gi|219690552|gb|ACL31775.1| colicin transport protein/biopolymer transport protein, membrane
spanning protein in TolA-TolQ-TolR complex [Haemophilus
parasuis SH0165]
Length = 226
Score = 234 bits (598), Expect = 7e-60, Method: Composition-based stats.
Identities = 70/224 (31%), Positives = 114/224 (50%), Gaps = 3/224 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
+ ++ +LFM+ + VK +I +L FS+LSW+VIIQ+S ++ FE FWSG+
Sbjct: 2 ATEFNLVSLFMEASIVVKLVILILISFSVLSWAVIIQRSRVLTRAKKDSLNFEDRFWSGE 61
Query: 68 SLETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
L + + L++ + G IF E+ + SP I R M++A+ REL
Sbjct: 62 DLHRLHEGLEHRRDGLTGAEQIFYVGFKEFNRLQQANPDSPESIIQGSSRAMNLALNREL 121
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV-SIPGIIESLISILL 184
EE+ + FLG++ S +G+ G V G+M F ++ + PGI E+LI+ +
Sbjct: 122 EELENYIPFLGTVGSISPYIGLFGTVWGIMHSFMGLSAVKQATLQSVAPGIAEALIATAI 181
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
GL +IP+ +AYN+ K F +EF+ IL R+
Sbjct: 182 GLFAAIPAVMAYNRLNLRVGKLEQNYVNFIDEFTTILHRKAFAK 225
>gi|262404185|ref|ZP_06080740.1| MotA/TolQ/ExbB proton channel family protein [Vibrio sp. RC586]
gi|262349217|gb|EEY98355.1| MotA/TolQ/ExbB proton channel family protein [Vibrio sp. RC586]
Length = 227
Score = 234 bits (598), Expect = 7e-60, Method: Composition-based stats.
Identities = 67/219 (30%), Positives = 108/219 (49%), Gaps = 3/219 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
DIS LF+Q VK ++ L S+ SW+ II++S R+ FE FWSG L
Sbjct: 4 DISFLDLFLQASFLVKMVMLTLLGMSVASWAAIIKRSKVISAAEREADTFEDRFWSGIDL 63
Query: 70 ETVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + +K + G+ IF + +E+ + +P + + R M VA+ARE++
Sbjct: 64 GALYQDVKKRKDDIYGIEEIFYAGFTEFARLRKTNPSAPDFVMEGTGRAMRVAVAREVDS 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ L FL ++ S +G+ G V G+M F ++ + + PGI E+LI+ +GL
Sbjct: 124 LETSLPFLATVGSISPYIGLFGTVWGIMHAFIALGEVKQATLAMVAPGIAEALIATAIGL 183
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ +AYN+ K F+ EF IL RQ
Sbjct: 184 FAAIPAVMAYNRLSNKVSKLEHNYATFSEEFHTILHRQA 222
>gi|300722394|ref|YP_003711680.1| inner membrane protein [Xenorhabdus nematophila ATCC 19061]
gi|297628897|emb|CBJ89480.1| inner membrane protein required for outer membrane integrity,
uptake of group A colicins and phage DNA [Xenorhabdus
nematophila ATCC 19061]
Length = 226
Score = 234 bits (598), Expect = 7e-60, Method: Composition-based stats.
Identities = 68/218 (31%), Positives = 113/218 (51%), Gaps = 3/218 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
++I LF++ G V+ I+ +L FSI+SW++IIQ++ R+ FE FWSG L
Sbjct: 1 MNILDLFLKAGFLVQLIMLILIGFSIVSWAIIIQRTKILNAASREAEAFEDKFWSGIELS 60
Query: 71 TVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ K ++ + G IF S E+ + + +P + R M +++ RELE +
Sbjct: 61 RLYKESQSRRDSLSGAEQIFHSGFKEFARLHQANSHAPEAVITGASRAMRISLNRELETL 120
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
+ FLG++ S +G+ G V G+M F ++ + + PGI E+LI+ +GL
Sbjct: 121 ENHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMVAPGIAEALIATAIGLF 180
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ +AYN+ + K + F EF AIL RQ
Sbjct: 181 AAIPAVMAYNRLNQRVNKLEQTYDNFMEEFLAILHRQA 218
>gi|238752124|ref|ZP_04613607.1| hypothetical protein yrohd0001_520 [Yersinia rohdei ATCC 43380]
gi|238785866|ref|ZP_04629834.1| hypothetical protein yberc0001_38220 [Yersinia bercovieri ATCC
43970]
gi|238797733|ref|ZP_04641227.1| hypothetical protein ymoll0001_12410 [Yersinia mollaretii ATCC
43969]
gi|238709701|gb|EEQ01936.1| hypothetical protein yrohd0001_520 [Yersinia rohdei ATCC 43380]
gi|238713236|gb|EEQ05280.1| hypothetical protein yberc0001_38220 [Yersinia bercovieri ATCC
43970]
gi|238718374|gb|EEQ10196.1| hypothetical protein ymoll0001_12410 [Yersinia mollaretii ATCC
43969]
Length = 228
Score = 234 bits (597), Expect = 7e-60, Method: Composition-based stats.
Identities = 72/221 (32%), Positives = 113/221 (51%), Gaps = 3/221 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
+ D++I LF+Q L VK I+ +L FSI SW++IIQ++ R FE FWSG
Sbjct: 1 MADMNILDLFLQASLFVKLIMLVLMGFSIASWAIIIQRTRILNAATRDAEAFEDKFWSGI 60
Query: 68 SLETVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
L + + + + G IF S E+ + + +P + D R M +++ REL
Sbjct: 61 ELSRLYQESQARRDTLGGSEQIFHSGFKEFARLHRANSHAPEAVIDGASRAMRISMNREL 120
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILL 184
E + + FLG++ S +G+ G V G+M F S+ + + PGI E+LI+ +
Sbjct: 121 EALETHIPFLGTVGSISPYIGLFGTVWGIMHAFISLGAVKQATLQMVAPGIAEALIATAI 180
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
GL +IP+ +AYN+ + K + F EF AIL RQ
Sbjct: 181 GLFAAIPAVMAYNRLNQRVNKLEQNYDNFMEEFIAILHRQA 221
>gi|260222862|emb|CBA32854.1| Protein tolQ [Curvibacter putative symbiont of Hydra
magnipapillata]
Length = 242
Score = 234 bits (597), Expect = 8e-60, Method: Composition-based stats.
Identities = 72/225 (32%), Positives = 114/225 (50%), Gaps = 3/225 (1%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
D+SI L + + V+ ++ LL + SI SW+ I +K + ++ Q FE+ FWSG S
Sbjct: 14 QDLSILHLVLNASIVVQAVMALLMMVSIASWAAIFRKLFSLKRVKTQNEAFEREFWSGSS 73
Query: 69 LETVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
L + + + + IF S M E++K ++ + D R M + RE++
Sbjct: 74 LNDLFNAASRNAQTCGPMERIFASGMREFQKLRERRVSDVGTLMDGARRAMRASFQREMD 133
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLG 185
E+ LSFL S+ S VG+ G V G+M F +A + PGI E+L++ +G
Sbjct: 134 EVESNLSFLASVGSVSPYVGLFGTVWGIMHAFTGLASLQQVTLSTVAPGIAEALVATAIG 193
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
L +IP+ +AYN+F D + A+Q E F EFS IL R +
Sbjct: 194 LFAAIPAVVAYNRFARDLDRIAIQQETFIEEFSNILQRNVSAQPA 238
>gi|22126934|ref|NP_670357.1| colicin uptake protein TolQ [Yersinia pestis KIM 10]
gi|45440869|ref|NP_992408.1| colicin uptake protein TolQ [Yersinia pestis biovar Microtus str.
91001]
gi|51595500|ref|YP_069691.1| colicin uptake protein TolQ [Yersinia pseudotuberculosis IP 32953]
gi|108806596|ref|YP_650512.1| colicin uptake protein TolQ [Yersinia pestis Antiqua]
gi|108813037|ref|YP_648804.1| colicin uptake protein TolQ [Yersinia pestis Nepal516]
gi|145599840|ref|YP_001163916.1| colicin uptake protein TolQ [Yersinia pestis Pestoides F]
gi|149366879|ref|ZP_01888913.1| TolQ colicin import protein [Yersinia pestis CA88-4125]
gi|153950907|ref|YP_001401834.1| colicin uptake protein TolQ [Yersinia pseudotuberculosis IP 31758]
gi|162420513|ref|YP_001605919.1| colicin uptake protein TolQ [Yersinia pestis Angola]
gi|165924350|ref|ZP_02220182.1| protein TolQ [Yersinia pestis biovar Orientalis str. F1991016]
gi|165938371|ref|ZP_02226929.1| protein TolQ [Yersinia pestis biovar Orientalis str. IP275]
gi|166011568|ref|ZP_02232466.1| protein TolQ [Yersinia pestis biovar Antiqua str. E1979001]
gi|166211429|ref|ZP_02237464.1| protein TolQ [Yersinia pestis biovar Antiqua str. B42003004]
gi|167399737|ref|ZP_02305255.1| protein TolQ [Yersinia pestis biovar Antiqua str. UG05-0454]
gi|167419441|ref|ZP_02311194.1| protein TolQ [Yersinia pestis biovar Orientalis str. MG05-1020]
gi|167423896|ref|ZP_02315649.1| protein TolQ [Yersinia pestis biovar Mediaevalis str. K1973002]
gi|218928289|ref|YP_002346164.1| colicin uptake protein TolQ [Yersinia pestis CO92]
gi|229841058|ref|ZP_04461217.1| membrane spanning protein in TolA-TolQ-TolR complex [Yersinia
pestis biovar Orientalis str. PEXU2]
gi|229843162|ref|ZP_04463308.1| membrane spanning protein in TolA-TolQ-TolR complex [Yersinia
pestis biovar Orientalis str. India 195]
gi|229893999|ref|ZP_04509185.1| membrane spanning protein in TolA-TolQ-TolR complex [Yersinia
pestis Pestoides A]
gi|229903477|ref|ZP_04518590.1| membrane spanning protein in TolA-TolQ-TolR complex [Yersinia
pestis Nepal516]
gi|270487258|ref|ZP_06204332.1| protein TolQ [Yersinia pestis KIM D27]
gi|294503126|ref|YP_003567188.1| TolQ colicin import protein [Yersinia pestis Z176003]
gi|21959974|gb|AAM86608.1|AE013907_2 inner membrane protein [Yersinia pestis KIM 10]
gi|45435727|gb|AAS61285.1| TolQ colicin import protein [Yersinia pestis biovar Microtus str.
91001]
gi|51588782|emb|CAH20396.1| TolQ colicin import protein [Yersinia pseudotuberculosis IP 32953]
gi|108776685|gb|ABG19204.1| TolQ colicin import protein [Yersinia pestis Nepal516]
gi|108778509|gb|ABG12567.1| TolQ colicin import protein [Yersinia pestis Antiqua]
gi|115346900|emb|CAL19787.1| TolQ colicin import protein [Yersinia pestis CO92]
gi|145211536|gb|ABP40943.1| TolQ colicin import protein [Yersinia pestis Pestoides F]
gi|149291253|gb|EDM41328.1| TolQ colicin import protein [Yersinia pestis CA88-4125]
gi|152962402|gb|ABS49863.1| protein TolQ [Yersinia pseudotuberculosis IP 31758]
gi|162353328|gb|ABX87276.1| protein TolQ [Yersinia pestis Angola]
gi|165913749|gb|EDR32368.1| protein TolQ [Yersinia pestis biovar Orientalis str. IP275]
gi|165923410|gb|EDR40542.1| protein TolQ [Yersinia pestis biovar Orientalis str. F1991016]
gi|165989516|gb|EDR41817.1| protein TolQ [Yersinia pestis biovar Antiqua str. E1979001]
gi|166207200|gb|EDR51680.1| protein TolQ [Yersinia pestis biovar Antiqua str. B42003004]
gi|166962182|gb|EDR58203.1| protein TolQ [Yersinia pestis biovar Orientalis str. MG05-1020]
gi|167050445|gb|EDR61853.1| protein TolQ [Yersinia pestis biovar Antiqua str. UG05-0454]
gi|167056745|gb|EDR66508.1| protein TolQ [Yersinia pestis biovar Mediaevalis str. K1973002]
gi|229679247|gb|EEO75350.1| membrane spanning protein in TolA-TolQ-TolR complex [Yersinia
pestis Nepal516]
gi|229689509|gb|EEO81570.1| membrane spanning protein in TolA-TolQ-TolR complex [Yersinia
pestis biovar Orientalis str. India 195]
gi|229697424|gb|EEO87471.1| membrane spanning protein in TolA-TolQ-TolR complex [Yersinia
pestis biovar Orientalis str. PEXU2]
gi|229703884|gb|EEO90897.1| membrane spanning protein in TolA-TolQ-TolR complex [Yersinia
pestis Pestoides A]
gi|262361162|gb|ACY57883.1| TolQ colicin import protein [Yersinia pestis D106004]
gi|262365282|gb|ACY61839.1| TolQ colicin import protein [Yersinia pestis D182038]
gi|270335762|gb|EFA46539.1| protein TolQ [Yersinia pestis KIM D27]
gi|294353585|gb|ADE63926.1| TolQ colicin import protein [Yersinia pestis Z176003]
gi|320014261|gb|ADV97832.1| membrane spanning protein in TolA-TolQ-TolR complex [Yersinia
pestis biovar Medievalis str. Harbin 35]
Length = 228
Score = 234 bits (597), Expect = 8e-60, Method: Composition-based stats.
Identities = 72/221 (32%), Positives = 113/221 (51%), Gaps = 3/221 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
+ D++I LF+Q L VK I+ +L FSI SW++IIQ++ R FE FWSG
Sbjct: 1 MADMNILDLFLQASLFVKLIMLVLMGFSIASWAIIIQRTRILNAATRDAEAFEDKFWSGI 60
Query: 68 SLETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
L + + + + G IF S E+ + + +P + D R M +++ REL
Sbjct: 61 ELSRLYQESQARRDTLSGSEQIFHSGFKEFARLHRANSHAPEAVIDGASRAMRISMNREL 120
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILL 184
E + + FLG++ S +G+ G V G+M F S+ + + PGI E+LI+ +
Sbjct: 121 EALETHIPFLGTVGSISPYIGLFGTVWGIMHAFISLGAVKQATLQMVAPGIAEALIATAI 180
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
GL +IP+ +AYN+ + K + F EF AIL RQ
Sbjct: 181 GLFAAIPAVMAYNRLNQHVNKLEQNYDNFMEEFIAILHRQA 221
>gi|85058861|ref|YP_454563.1| colicin uptake protein TolQ [Sodalis glossinidius str. 'morsitans']
gi|84779381|dbj|BAE74158.1| colicin import protein TolQ [Sodalis glossinidius str. 'morsitans']
Length = 228
Score = 234 bits (597), Expect = 8e-60, Method: Composition-based stats.
Identities = 70/226 (30%), Positives = 114/226 (50%), Gaps = 3/226 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
+ D++IF LF++ G VK I+ +L FSI SW++IIQ+S + R+ FE FWSG
Sbjct: 1 MTDMNIFDLFLKAGFLVKLIMLILICFSIASWAIIIQRSRILTSAAREAEAFEDKFWSGI 60
Query: 68 SLETVCKS--LKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
L + + + G IF + E+ + +P + + R M +++ REL
Sbjct: 61 ELSRLYQESLTRRDSLSGSEQIFYAGFKEFARLHRANNHAPEAVVEGASRAMRISMNREL 120
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILL 184
E + + FLG++ S +G+ G V G+M F + + + PGI E+LI+ +
Sbjct: 121 EALETHIPFLGTVGSISPYIGLFGTVWGIMHAFIGLGTVKQATLQMVAPGIAEALIATAI 180
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
GL +IP+ +A+N+ K + F EF AIL RQ + S
Sbjct: 181 GLFAAIPAVMAFNRLSLRVNKLEQNYDNFTEEFIAILHRQAFASDS 226
>gi|123443149|ref|YP_001007123.1| colicin uptake protein TolQ [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|238757965|ref|ZP_04619146.1| hypothetical protein yaldo0001_8410 [Yersinia aldovae ATCC 35236]
gi|238765248|ref|ZP_04626177.1| hypothetical protein ykris0001_32630 [Yersinia kristensenii ATCC
33638]
gi|238790495|ref|ZP_04634264.1| hypothetical protein yfred0001_12250 [Yersinia frederiksenii ATCC
33641]
gi|332160926|ref|YP_004297503.1| colicin uptake protein TolQ [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|122090110|emb|CAL12973.1| TolQ colicin import protein [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|238696520|gb|EEP89308.1| hypothetical protein ykris0001_32630 [Yersinia kristensenii ATCC
33638]
gi|238703719|gb|EEP96255.1| hypothetical protein yaldo0001_8410 [Yersinia aldovae ATCC 35236]
gi|238721439|gb|EEQ13110.1| hypothetical protein yfred0001_12250 [Yersinia frederiksenii ATCC
33641]
gi|318604833|emb|CBY26331.1| mota/TolQ/ExbB proton channel family protein [Yersinia
enterocolitica subsp. palearctica Y11]
gi|325665156|gb|ADZ41800.1| colicin uptake protein TolQ [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|330864062|emb|CBX74139.1| protein tolQ [Yersinia enterocolitica W22703]
Length = 228
Score = 234 bits (597), Expect = 8e-60, Method: Composition-based stats.
Identities = 72/221 (32%), Positives = 113/221 (51%), Gaps = 3/221 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
+ D++I LF+Q L VK I+ +L FSI SW++IIQ++ R FE FWSG
Sbjct: 1 MADMNILDLFLQASLFVKLIMLVLMGFSIASWAIIIQRTRILNAATRDAEAFEDKFWSGI 60
Query: 68 SLETVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
L + + + + G IF S E+ + + +P + D R M +++ REL
Sbjct: 61 ELSRLYQESQARRDTLGGSEQIFHSGFKEFARLHRANSHAPEAVIDGASRAMRISMNREL 120
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILL 184
E + + FLG++ S +G+ G V G+M F S+ + + PGI E+LI+ +
Sbjct: 121 EALETHIPFLGTVGSISPYIGLFGTVWGIMHAFISLGAVKQATLQMVAPGIAEALIATAI 180
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
GL +IP+ +AYN+ + K + F EF AIL RQ
Sbjct: 181 GLFAAIPAVMAYNRLNQRVNKLEQNYDNFMEEFIAILHRQA 221
>gi|307256328|ref|ZP_07538111.1| hypothetical protein appser10_3350 [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
gi|306865154|gb|EFM97054.1| hypothetical protein appser10_3350 [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
Length = 226
Score = 234 bits (597), Expect = 9e-60, Method: Composition-based stats.
Identities = 70/220 (31%), Positives = 114/220 (51%), Gaps = 3/220 (1%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
+ ++ +LFMQ + VK +I +L FSILSW+VIIQ+S ++ FE FWSG+
Sbjct: 3 TEFNLISLFMQASIVVKIVILILISFSILSWAVIIQRSRVLTEAKKNALAFENKFWSGED 62
Query: 69 LETVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
L + + L+N + G IF + E+ + +P R M++A+ RE+E
Sbjct: 63 LHRLHEGLENRRDALNGSEQIFYAGFKEYMRLQQVNPDAPEATMKGSSRAMNLALNREVE 122
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV-SIPGIIESLISILLG 185
+ + FLG++ S +G+ G V G+M F ++ + PGI E+LI+ +G
Sbjct: 123 NLESYIPFLGTVGSISPYIGLFGTVWGIMHSFMGLSAVKQATLQSVAPGIAEALIATAIG 182
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
L +IP+ +AYN+ K + F +EF+ IL RQ
Sbjct: 183 LFAAIPAVMAYNRLSLRVNKLEQEYANFIDEFTTILHRQA 222
>gi|308050001|ref|YP_003913567.1| Cell division and transport-associated protein TolQ [Ferrimonas
balearica DSM 9799]
gi|307632191|gb|ADN76493.1| Cell division and transport-associated protein TolQ [Ferrimonas
balearica DSM 9799]
Length = 230
Score = 234 bits (597), Expect = 9e-60, Method: Composition-based stats.
Identities = 68/219 (31%), Positives = 115/219 (52%), Gaps = 4/219 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
+IS LF++ L VK ++ L + S+ +W+VI Q+ +R+ + FE FWSG L
Sbjct: 4 EISFIGLFLEASLLVKLVMIFLLLMSVAAWTVIFQRQKALKEAQRRAQRFEDRFWSGVDL 63
Query: 70 ETVCKSLKNH--HNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + L N GL +F + E+ + K +RS + D R M V+++RE+++
Sbjct: 64 NRLYQELSARGDQNSGLELMFTNGFKEYARL-SKSSRSAEAVMDGSYRAMRVSLSREVDK 122
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
+ + L L ++ S +G+ G V G+M F ++ + + PGI E+LI+ +GL
Sbjct: 123 LEQHLPMLATIGSTSPYIGLFGTVWGIMNSFIALGSVQHATLNMVAPGIAEALIATAMGL 182
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ I +N+F +K F +EFSAIL RQ
Sbjct: 183 FAAIPAVIFFNRFSTRVEKLENSYANFMDEFSAILHRQA 221
>gi|258621412|ref|ZP_05716446.1| tolQ protein [Vibrio mimicus VM573]
gi|258626841|ref|ZP_05721648.1| tolQ protein [Vibrio mimicus VM603]
gi|262171196|ref|ZP_06038874.1| MotA/TolQ/ExbB proton channel family protein [Vibrio mimicus
MB-451]
gi|258580888|gb|EEW05830.1| tolQ protein [Vibrio mimicus VM603]
gi|258586800|gb|EEW11515.1| tolQ protein [Vibrio mimicus VM573]
gi|261892272|gb|EEY38258.1| MotA/TolQ/ExbB proton channel family protein [Vibrio mimicus
MB-451]
Length = 227
Score = 234 bits (597), Expect = 9e-60, Method: Composition-based stats.
Identities = 66/219 (30%), Positives = 108/219 (49%), Gaps = 3/219 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
DIS LF+Q VK ++ L S+ SW+ II++S ++ FE FWSG L
Sbjct: 4 DISFLDLFLQASFLVKMVMLTLLGMSVASWAAIIKRSKVISAAEKEADTFEDRFWSGIDL 63
Query: 70 ETVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + +K + G+ IF + +E+ + +P + + R M VA+ARE++
Sbjct: 64 GALYQDVKKRKDDIYGIEEIFYAGFTEFARLRKTNPSAPDFVMEGTGRAMRVAVAREVDS 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ L FL ++ S +G+ G V G+M F ++ + + PGI E+LI+ +GL
Sbjct: 124 LETSLPFLATVGSISPYIGLFGTVWGIMHAFIALGEVKQATLAMVAPGIAEALIATAIGL 183
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ +AYN+ K F+ EF IL RQ
Sbjct: 184 FAAIPAVMAYNRLSNKVSKLEHNYATFSEEFHTILHRQA 222
>gi|330991875|ref|ZP_08315824.1| Protein tolQ [Gluconacetobacter sp. SXCC-1]
gi|329760896|gb|EGG77391.1| Protein tolQ [Gluconacetobacter sp. SXCC-1]
Length = 221
Score = 234 bits (597), Expect = 9e-60, Method: Composition-based stats.
Identities = 76/219 (34%), Positives = 123/219 (56%), Gaps = 3/219 (1%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
++ALFM + VK ++ L S++ W++I K + + RQ +FE+ FW+G SLE +
Sbjct: 1 MWALFMHASIVVKLVMIGLVSCSVIVWAIIFDKFMTVRRVNRQANDFEERFWAGGSLEDL 60
Query: 73 CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARS--PIGIQDRIDRMMDVAIARELEEITE 130
+S +AA+F +AM EW++S G+QDR++R M + I RE++ +
Sbjct: 61 YESDGAKPVHPMAAVFGAAMGEWRRSSRISGIDLVHGGVQDRVNRAMAITITREMDRLNR 120
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVS 189
+ FL ++ +G+ G V G+M F SIA ++ N+ V PGI E+L + +GL +
Sbjct: 121 WIIFLATIGPVAPFIGLFGTVWGIMHAFGSIAAMHNTNLSVVAPGISEALFATAIGLVTA 180
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
IP+ IAYN F +++ F EF+AILSRQ+E
Sbjct: 181 IPAVIAYNVISNSMSVFEDRLDAFGTEFAAILSRQSEER 219
>gi|212634654|ref|YP_002311179.1| MotA/TolQ/ExbB proton channel [Shewanella piezotolerans WP3]
gi|212556138|gb|ACJ28592.1| MotA/TolQ/ExbB proton channel [Shewanella piezotolerans WP3]
Length = 229
Score = 234 bits (597), Expect = 9e-60, Method: Composition-based stats.
Identities = 74/219 (33%), Positives = 115/219 (52%), Gaps = 3/219 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
DIS LF+Q L VK ++ L SI SW+VI+Q+ + + +FE FWSG L
Sbjct: 4 DISFIGLFLQASLLVKFVMLTLLSLSIASWAVILQRRKLLTAAKTEALKFEDKFWSGVDL 63
Query: 70 ETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + L + GL A+F++ E+ + R P + D R M V+++RELE+
Sbjct: 64 NKLYQELSARQDRTSGLEALFVTGFKEYARLNKLNGRVPEAVMDGSYRAMRVSLSRELEK 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ L L ++ S +G+ G V G+M F ++ + + + PGI E+LI+ +GL
Sbjct: 124 LETHLPLLATIGSTSPYIGLFGTVWGIMNSFIALGAVENATLAMVAPGIAEALIATAMGL 183
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ IAYN+F +K M F EFS+IL RQ
Sbjct: 184 FAAIPAVIAYNRFSTQVEKIEMSYANFMEEFSSILHRQA 222
>gi|261211903|ref|ZP_05926190.1| MotA/TolQ/ExbB proton channel family protein [Vibrio sp. RC341]
gi|260839253|gb|EEX65885.1| MotA/TolQ/ExbB proton channel family protein [Vibrio sp. RC341]
Length = 227
Score = 233 bits (596), Expect = 1e-59, Method: Composition-based stats.
Identities = 67/219 (30%), Positives = 108/219 (49%), Gaps = 3/219 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
DIS LF+Q VK ++ L S+ SW+ II++S R+ FE FWSG L
Sbjct: 4 DISFLDLFLQASFLVKMVMLTLLGMSVASWAAIIKRSKIISAAEREADTFEDRFWSGIDL 63
Query: 70 ETVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + +K + G+ IF + +E+ + +P + + R M VA+ARE++
Sbjct: 64 GALYQDVKKRKDDIYGIEEIFYAGFTEFARLRKTNPSAPDFVMEGTGRAMRVAVAREVDS 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ L FL ++ S +G+ G V G+M F ++ + + PGI E+LI+ +GL
Sbjct: 124 LETSLPFLATVGSISPYIGLFGTVWGIMHAFIALGEVKQATLAMVAPGIAEALIATAIGL 183
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ +AYN+ K F+ EF IL RQ
Sbjct: 184 FAAIPAVMAYNRLSNKVSKLEHNYATFSEEFHTILHRQA 222
>gi|190149573|ref|YP_001968098.1| colicin transporter TolQ [Actinobacillus pleuropneumoniae serovar 7
str. AP76]
gi|303249540|ref|ZP_07335747.1| colicin transport protein [Actinobacillus pleuropneumoniae serovar
6 str. Femo]
gi|303252542|ref|ZP_07338705.1| colicin transport protein [Actinobacillus pleuropneumoniae serovar
2 str. 4226]
gi|307247292|ref|ZP_07529340.1| hypothetical protein appser2_2890 [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
gi|307251831|ref|ZP_07533733.1| hypothetical protein appser6_3520 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|307260767|ref|ZP_07542454.1| hypothetical protein appser12_3390 [Actinobacillus pleuropneumoniae
serovar 12 str. 1096]
gi|307262893|ref|ZP_07544517.1| hypothetical protein appser13_3180 [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
gi|189914704|gb|ACE60956.1| colicin transport protein TolQ [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
gi|302648510|gb|EFL78703.1| colicin transport protein [Actinobacillus pleuropneumoniae serovar
2 str. 4226]
gi|302651614|gb|EFL81763.1| colicin transport protein [Actinobacillus pleuropneumoniae serovar
6 str. Femo]
gi|306856136|gb|EFM88291.1| hypothetical protein appser2_2890 [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
gi|306860738|gb|EFM92749.1| hypothetical protein appser6_3520 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|306869493|gb|EFN01283.1| hypothetical protein appser12_3390 [Actinobacillus pleuropneumoniae
serovar 12 str. 1096]
gi|306871798|gb|EFN03518.1| hypothetical protein appser13_3180 [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
Length = 226
Score = 233 bits (596), Expect = 1e-59, Method: Composition-based stats.
Identities = 70/220 (31%), Positives = 114/220 (51%), Gaps = 3/220 (1%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
+ ++ +LFMQ + VK +I +L FSILSW+VIIQ+S ++ FE FWSG+
Sbjct: 3 TEFNLVSLFMQASIVVKIVILILISFSILSWAVIIQRSRVLTEAKKNALAFENKFWSGED 62
Query: 69 LETVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
L + + L+N + G IF + E+ + +P R M++A+ RE+E
Sbjct: 63 LHRLHEGLENRRDALNGSEQIFYAGFKEYMRLQQVNPDAPEATMKGSSRAMNLALNREVE 122
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV-SIPGIIESLISILLG 185
+ + FLG++ S +G+ G V G+M F ++ + PGI E+LI+ +G
Sbjct: 123 NLESYIPFLGTVGSISPYIGLFGTVWGIMHSFMGLSAVKQATLQSVAPGIAEALIATAIG 182
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
L +IP+ +AYN+ K + F +EF+ IL RQ
Sbjct: 183 LFAAIPAVMAYNRLSLRVNKLEQEYANFIDEFTTILHRQA 222
>gi|221065983|ref|ZP_03542088.1| protein TolQ [Comamonas testosteroni KF-1]
gi|220711006|gb|EED66374.1| protein TolQ [Comamonas testosteroni KF-1]
Length = 234
Score = 233 bits (596), Expect = 1e-59, Method: Composition-based stats.
Identities = 78/228 (34%), Positives = 116/228 (50%), Gaps = 3/228 (1%)
Query: 6 LAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS 65
+ D+SI +L MQ V+ ++ +L I SI SW+ I +K+ +R FEQ FWS
Sbjct: 1 MNSQDMSILSLIMQASWVVQLVMLILVIASIASWATIFRKAQTLKRVRTLNDNFEQDFWS 60
Query: 66 GQSLETVCKSLKNHHNIG--LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAR 123
G SL + S + G + IF S M E++K ++ + D R M + R
Sbjct: 61 GTSLNDLYASAAQNAKTGGPMERIFASGMREYQKLRERRIGDVATLLDGTRRAMRASFQR 120
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISI 182
EL+EI LSFLG+++S VG+ G V G+M F A + ++ PGI E+L++
Sbjct: 121 ELDEIESGLSFLGTVASVSPYVGLFGTVWGVMHAFTGFANMEQITLATVAPGIAEALVAT 180
Query: 183 LLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
+GL +IP+ AYN++ + A Q E F EFS IL R S
Sbjct: 181 AMGLFAAIPAVTAYNRYAHHIDRIASQEETFIEEFSNILQRNVGATAS 228
>gi|308186080|ref|YP_003930211.1| Protein tolQ [Pantoea vagans C9-1]
gi|308056590|gb|ADO08762.1| Protein tolQ [Pantoea vagans C9-1]
Length = 225
Score = 233 bits (596), Expect = 1e-59, Method: Composition-based stats.
Identities = 69/218 (31%), Positives = 111/218 (50%), Gaps = 3/218 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
++I LF++ L VK I+ +L FSI SW++IIQ++ R+ FE FWSG L
Sbjct: 1 MNILDLFLKASLLVKLIMLILIGFSIASWAIIIQRTRILNAAGREAEAFEDKFWSGIELS 60
Query: 71 TVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ + + G IF S E+ + +P + D R M +++ RELE +
Sbjct: 61 RLYQESQERREELGGSEQIFYSGFKEFARLHRANNHAPEAVIDGASRAMRISMNRELEAL 120
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
+ FLG++ S +G+ G V G+M F ++ + + PGI E+LI+ +GL
Sbjct: 121 ENHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMVAPGIAEALIATAIGLF 180
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ +AYN+ + K + F EF+AIL RQ
Sbjct: 181 AAIPAVMAYNRLNQRVNKLEQGYDNFMEEFTAILHRQA 218
>gi|149910562|ref|ZP_01899201.1| Putative TolQ protein [Moritella sp. PE36]
gi|149806405|gb|EDM66378.1| Putative TolQ protein [Moritella sp. PE36]
Length = 230
Score = 233 bits (596), Expect = 1e-59, Method: Composition-based stats.
Identities = 69/223 (30%), Positives = 111/223 (49%), Gaps = 3/223 (1%)
Query: 6 LAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS 65
+ DIS F LF + + VK ++ +L S+ SW++I +S + FE FWS
Sbjct: 1 MEAADISFFELFWEASILVKAVMLILLSMSVASWAMIFHRSKALTQANEASKRFEDRFWS 60
Query: 66 GQSLETVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAR 123
G L + K N G+ IF + E+ + + + I D R M VA++R
Sbjct: 61 GIDLSKLYKESDARKNNIQGMELIFHAGFKEYVRIHNADQDNTDAIMDGSYRTMRVALSR 120
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISI 182
E++E+ L+ L ++ S +G+ G V G+M F ++ + + PGI E+LI+
Sbjct: 121 EVDELEVHLNNLATIGSISPYIGLFGTVWGIMSSFIALGAVQQATLAMVAPGIAEALIAT 180
Query: 183 LLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+GL +IP+ IAYN+F + + F EFS+IL RQT
Sbjct: 181 AMGLFAAIPAVIAYNRFSDQVMRIENNYANFMEEFSSILHRQT 223
>gi|145632632|ref|ZP_01788366.1| TolQ [Haemophilus influenzae 3655]
gi|144986827|gb|EDJ93379.1| TolQ [Haemophilus influenzae 3655]
gi|309972456|gb|ADO95657.1| Outer membrane integrity protein TolQ [Haemophilus influenzae
R2846]
Length = 228
Score = 233 bits (596), Expect = 1e-59, Method: Composition-based stats.
Identities = 66/222 (29%), Positives = 115/222 (51%), Gaps = 3/222 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
+++ LF++ + V+ +I +L FSI+SW++IIQ+S ++ FE FWSG+ L
Sbjct: 4 ELNFLDLFLKASIVVQLVIVILISFSIISWAIIIQRSRILTNALKEAHTFEDRFWSGEDL 63
Query: 70 ETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + L N + G IF E+ + +P I R M++A+ RE+E
Sbjct: 64 NKLYEGLSNRRDGLTGSEQIFCVGFKEFSRLKQVNPDAPEAIIKGTMRAMNLAMNREIES 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
+ ++ FL +++S +G+ G V G+M F +++G + + PGI E+LI+ +GL
Sbjct: 124 LENRVPFLATVASVSPYIGLFGTVWGIMHAFMALSGAKQATLQMVAPGIAEALIATAIGL 183
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
+IP+ +AYN+ F +EF+ IL RQ G
Sbjct: 184 FAAIPAVMAYNRLSLRVNAIEQDYGNFIDEFTTILHRQAFGK 225
>gi|124268138|ref|YP_001022142.1| transmembrane protein/ biopolymer transport [Methylibium
petroleiphilum PM1]
gi|124260913|gb|ABM95907.1| transmembrane protein/ biopolymer transport [Methylibium
petroleiphilum PM1]
Length = 227
Score = 233 bits (596), Expect = 1e-59, Method: Composition-based stats.
Identities = 77/223 (34%), Positives = 115/223 (51%), Gaps = 3/223 (1%)
Query: 6 LAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS 65
+ D+SIF L + L V+ +I L S+ SW+VI K +R FE+ FWS
Sbjct: 1 MNSQDLSIFQLVLHASLVVQLVIVALLAMSLASWTVIFGKLFGLKRVRALNEGFERDFWS 60
Query: 66 GQSLETVCKSL--KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAR 123
GQ+L+ + K + + IF S M E+ K ++ P + D R M + R
Sbjct: 61 GQNLQDLYADAAKKADRSGPMTRIFASGMREFMKLRERRVADPGALLDGSRRAMRASFQR 120
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISI 182
EL+ + LSFL S+ S VG+ G V G+M F +A + ++ PGI E+L++
Sbjct: 121 ELDTVESHLSFLASVGSVSPYVGLFGTVWGIMHAFTGLANLQQVTLATVAPGIAEALVAT 180
Query: 183 LLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+GL +IP+ +AYN+F D + A+QME F EFS IL R
Sbjct: 181 AIGLFAAIPAVLAYNRFARDIDRIAIQMETFIEEFSNILQRNI 223
>gi|49474674|ref|YP_032716.1| inner membrane tolQ protein [Bartonella quintana str. Toulouse]
gi|49240178|emb|CAF26644.1| Inner membrane tolQ protein [Bartonella quintana str. Toulouse]
Length = 237
Score = 233 bits (596), Expect = 1e-59, Method: Composition-based stats.
Identities = 88/217 (40%), Positives = 143/217 (65%), Gaps = 1/217 (0%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
I + LF+Q VK I+ L + S+ SW++I +K + +R + ++FE++FWSG+ LE
Sbjct: 12 IGMLRLFIQANWVVKAIMISLLLASVWSWAIIFEKIFTYRKIRCEIKQFERIFWSGKPLE 71
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
+ + K+ ++A+FM+AM EWKKS +KG + I +Q RID+ MD+ + RE +I
Sbjct: 72 DLYSTCKSQRPSSISAVFMAAMVEWKKSLEKGIHTSISLQSRIDKAMDLTLGRESAKIES 131
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVS 189
KLSFL ++ SAG +G+LG V+G+MG F SI+ + ++ + PGI E+L++ +GL +
Sbjct: 132 KLSFLATLGSAGPFIGLLGTVIGVMGSFLSISASQNTSLAIVAPGIAEALLATAIGLFAA 191
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
IP+ IAYNK + +S + Q+E FA+EFS I+SR+ +
Sbjct: 192 IPAVIAYNKLVNESAQIIAQIENFADEFSTIVSRRID 228
>gi|145638704|ref|ZP_01794313.1| long-chain-fatty-acid--CoA ligase [Haemophilus influenzae PittII]
gi|145272299|gb|EDK12207.1| long-chain-fatty-acid--CoA ligase [Haemophilus influenzae PittII]
gi|309750196|gb|ADO80180.1| Outer membrane integrity protein TolQ [Haemophilus influenzae
R2866]
Length = 228
Score = 233 bits (596), Expect = 1e-59, Method: Composition-based stats.
Identities = 67/222 (30%), Positives = 116/222 (52%), Gaps = 3/222 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
+++ LF++ + V+ +I +L FSI+SW++IIQ+S ++ R FE FWSG+ L
Sbjct: 4 ELNFLDLFLKASIVVQLVIVILISFSIISWAIIIQRSRILTNALKEARTFEDRFWSGEDL 63
Query: 70 ETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + L N + G IF E+ + +P I R M++A+ RE+E
Sbjct: 64 NKLYEGLSNRRDGLTGSEQIFSVGFKEFSRLKQVNPDAPEAIIKGTMRAMNLAMNREIES 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
+ ++ FL +++S +G+ G V G+M F +++G + + PGI E+LI+ +GL
Sbjct: 124 LENRVPFLATVASVSPYIGLFGTVWGIMHAFMALSGAKQATLQMVAPGIAEALIATAIGL 183
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
+IP+ +AYN+ F +EF+ IL RQ G
Sbjct: 184 FAAIPAVMAYNRLSLRVNAIEQDYGNFIDEFTTILHRQAFGK 225
>gi|291616737|ref|YP_003519479.1| TolQ [Pantoea ananatis LMG 20103]
gi|291151767|gb|ADD76351.1| TolQ [Pantoea ananatis LMG 20103]
Length = 228
Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats.
Identities = 67/221 (30%), Positives = 112/221 (50%), Gaps = 3/221 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
+ D+++ LF++ L VK I+ +L FSI SW++IIQ++ R+ FE FWSG
Sbjct: 1 MTDMNVLDLFLKASLLVKLIMLILIGFSIASWAIIIQRTRILNAAGREADAFEDKFWSGV 60
Query: 68 SLETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
L + + + G IF + E+ + +P + R M +++ REL
Sbjct: 61 ELSRLYQESQARREELAGSEQIFYAGFKEFARLHRVNNHAPEAAVEGASRAMRISMNREL 120
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILL 184
E + + FLG++ S +G+ G V G+M F ++ + + PGI E+LI+ +
Sbjct: 121 EALENHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMVAPGIAEALIATAI 180
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
GL +IP+ +AYN+ + K + F EF+AIL RQ
Sbjct: 181 GLFAAIPAVMAYNRLNQRVNKLEQGYDNFMEEFTAILHRQA 221
>gi|15641841|ref|NP_231473.1| tolQ protein [Vibrio cholerae O1 biovar El Tor str. N16961]
gi|121727659|ref|ZP_01680762.1| tolQ protein [Vibrio cholerae V52]
gi|147674417|ref|YP_001217375.1| tolQ protein [Vibrio cholerae O395]
gi|153820329|ref|ZP_01972996.1| tolQ protein [Vibrio cholerae NCTC 8457]
gi|227081968|ref|YP_002810519.1| tolQ protein [Vibrio cholerae M66-2]
gi|254848925|ref|ZP_05238275.1| tolQ protein [Vibrio cholerae MO10]
gi|255745399|ref|ZP_05419348.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholera CIRS
101]
gi|262169826|ref|ZP_06037517.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae RC27]
gi|298498122|ref|ZP_07007929.1| TolQ [Vibrio cholerae MAK 757]
gi|10441437|gb|AAG17039.1|AF187269_1 TolQ [Vibrio cholerae O395]
gi|9656366|gb|AAF94987.1| tolQ protein [Vibrio cholerae O1 biovar El Tor str. N16961]
gi|121630046|gb|EAX62453.1| tolQ protein [Vibrio cholerae V52]
gi|126509124|gb|EAZ71718.1| tolQ protein [Vibrio cholerae NCTC 8457]
gi|146316300|gb|ABQ20839.1| tolQ protein [Vibrio cholerae O395]
gi|227009856|gb|ACP06068.1| tolQ protein [Vibrio cholerae M66-2]
gi|227013738|gb|ACP09948.1| tolQ protein [Vibrio cholerae O395]
gi|254844630|gb|EET23044.1| tolQ protein [Vibrio cholerae MO10]
gi|255737229|gb|EET92625.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholera CIRS
101]
gi|262022060|gb|EEY40770.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae RC27]
gi|297542455|gb|EFH78505.1| TolQ [Vibrio cholerae MAK 757]
Length = 227
Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats.
Identities = 67/219 (30%), Positives = 108/219 (49%), Gaps = 3/219 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
DIS LF+Q VK ++ L S+ SW+ II++S R+ FE FWSG L
Sbjct: 4 DISFLDLFLQASFLVKMVMLTLLGMSVASWAAIIKRSKVISAAEREADTFEDRFWSGMDL 63
Query: 70 ETVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + +K + G+ IF + +E+ + +P + + R M VA+ARE++
Sbjct: 64 GALYQDVKKRKDDIYGIEEIFYAGFTEFARLRKTNPGAPDFVMEGTGRAMRVAVAREVDS 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ L FL ++ S +G+ G V G+M F ++ + + PGI E+LI+ +GL
Sbjct: 124 LETSLPFLATVGSISPYIGLFGTVWGIMHAFIALGEVKQATLAMVAPGIAEALIATAIGL 183
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ +AYN+ K F+ EF IL RQ
Sbjct: 184 FAAIPAVMAYNRLSNKVSKLEHTYATFSEEFHTILHRQV 222
>gi|209965098|ref|YP_002298013.1| protein TolQ [Rhodospirillum centenum SW]
gi|209958564|gb|ACI99200.1| protein TolQ [Rhodospirillum centenum SW]
Length = 244
Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats.
Identities = 77/226 (34%), Positives = 121/226 (53%), Gaps = 5/226 (2%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
++SI LF+ VK ++ L S+ W++I K+V ++ EFE+ FWSG
Sbjct: 18 AHELSILGLFLAADWIVKIVMLALVGASVWCWAIIFDKAVKLRRMKAAATEFEEQFWSGG 77
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARS----PIGIQDRIDRMMDVAIAR 123
SL+ + + + L+A F + M EW+ + ++G + + RI+R+M V I R
Sbjct: 78 SLDQLYDEVAANPGDPLSATFAAGMREWRHAAERGLLTTGAMRANLAQRIERVMSVTIGR 137
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISI 182
E+ ++ L S+ S +G+ G V G+M F SIA + ++ V PGI E+L +
Sbjct: 138 EMAGAERYMTVLASVGSTAPFIGLFGTVWGIMNAFTSIAAQQNTSLAVVAPGIAEALFAT 197
Query: 183 LLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
LGL +IP+ IAYNKF D +FA +++ F EFSAIL R E
Sbjct: 198 ALGLVAAIPAVIAYNKFSTDLGRFADRLDSFTTEFSAILQRHLEER 243
>gi|330828304|ref|YP_004391256.1| protein TolQ [Aeromonas veronii B565]
gi|328803440|gb|AEB48639.1| Protein TolQ [Aeromonas veronii B565]
Length = 229
Score = 233 bits (595), Expect = 2e-59, Method: Composition-based stats.
Identities = 67/219 (30%), Positives = 110/219 (50%), Gaps = 3/219 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
+IS LF Q L VK ++ L SI+SW++IIQ+S +FE FWSG L
Sbjct: 4 EISFIGLFWQASLLVKLVMMTLMSMSIVSWALIIQRSKAIKAANLASEQFEDRFWSGVDL 63
Query: 70 ETVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + + + G+ IF S E+ + GAR + D R M V+++R +++
Sbjct: 64 NRLYQESSSRRDDIEGMEDIFYSGFKEYARLLKAGARGQDAVMDGTYRAMRVSLSRAVDD 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
+ L L ++ S +G+ G V G+M F ++ + + PGI E+LI+ +GL
Sbjct: 124 LESNLPVLATIGSISPYIGLFGTVWGIMNAFIALGQVQQATLQMVAPGIAEALIATAMGL 183
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ I YN+F ++ F +EF+ IL+RQ
Sbjct: 184 FAAIPAVIFYNRFSNKVERLENAYANFMDEFTTILNRQI 222
>gi|292487658|ref|YP_003530531.1| protein TolQ [Erwinia amylovora CFBP1430]
gi|291553078|emb|CBA20123.1| Protein tolQ [Erwinia amylovora CFBP1430]
gi|312171766|emb|CBX80024.1| Protein tolQ [Erwinia amylovora ATCC BAA-2158]
Length = 225
Score = 233 bits (595), Expect = 2e-59, Method: Composition-based stats.
Identities = 68/218 (31%), Positives = 111/218 (50%), Gaps = 3/218 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
++I LF++ L VK I+ +L FSI SW+VIIQ++ R FE FWSG L
Sbjct: 1 MNILDLFLKASLLVKLIMLILIGFSIASWAVIIQRTRILNAAVRDADAFEDKFWSGIELS 60
Query: 71 TVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ + ++ + G IF + E+ + +P + + R M +++ RELE +
Sbjct: 61 RLYQESQSRRDELGGSEQIFYAGFKEFARLHRANNHAPEAVVEGATRAMRISMNRELEAL 120
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
+ FLG++ S +G+ G V G+M F ++ + + PGI E+LI+ +GL
Sbjct: 121 ENHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMVAPGIAEALIATAIGLF 180
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ +AYN+ K + F EF+AIL RQ
Sbjct: 181 AAIPAVMAYNRLTLRVNKLEQNYDNFMEEFTAILHRQA 218
>gi|307826392|ref|ZP_07656594.1| protein TolQ [Methylobacter tundripaludum SV96]
gi|307732569|gb|EFO03444.1| protein TolQ [Methylobacter tundripaludum SV96]
Length = 225
Score = 233 bits (594), Expect = 2e-59, Method: Composition-based stats.
Identities = 67/221 (30%), Positives = 108/221 (48%), Gaps = 3/221 (1%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
D+SIF L + V+ ++ +L S+ SW+ I K EFE+ FWSG
Sbjct: 3 TDLSIFHLVKEASFVVQFVMLILLSASVSSWTFIFSKRKELNRAIEITDEFEEQFWSGVV 62
Query: 69 LETVCKSL--KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
L + + L K+ G+ IF++ E+ + G P + R+M + ++RELE
Sbjct: 63 LAELYRKLAAKDFEPEGIEKIFLAGYKEFSRMRQAGNVEPGVQVESAQRVMRIELSRELE 122
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV-SIPGIIESLISILLG 185
+ E L+FL ++ S +G+ G V G+M F S+ + PGI E+LI+ +G
Sbjct: 123 RLDEHLAFLATVGSISPYIGLFGTVWGIMNSFMSLGNVKQATLAQVAPGIAEALIATAIG 182
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
L +IP+ I+YN+F + + E F EF +L RQ
Sbjct: 183 LFAAIPAVISYNRFSTRLDRLTGRYELFVEEFVVLLQRQAH 223
>gi|153827559|ref|ZP_01980226.1| tolQ protein [Vibrio cholerae MZO-2]
gi|153828554|ref|ZP_01981221.1| tolQ protein [Vibrio cholerae 623-39]
gi|254292156|ref|ZP_04962927.1| tolQ protein [Vibrio cholerae AM-19226]
gi|297579358|ref|ZP_06941286.1| tolQ protein [Vibrio cholerae RC385]
gi|148875949|gb|EDL74084.1| tolQ protein [Vibrio cholerae 623-39]
gi|149738472|gb|EDM52868.1| tolQ protein [Vibrio cholerae MZO-2]
gi|150421919|gb|EDN13895.1| tolQ protein [Vibrio cholerae AM-19226]
gi|297536952|gb|EFH75785.1| tolQ protein [Vibrio cholerae RC385]
gi|327484393|gb|AEA78800.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae
LMA3894-4]
Length = 227
Score = 233 bits (594), Expect = 2e-59, Method: Composition-based stats.
Identities = 67/219 (30%), Positives = 108/219 (49%), Gaps = 3/219 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
DIS LF+Q VK ++ L S+ SW+ II++S R+ FE FWSG L
Sbjct: 4 DISFLDLFLQASFLVKMVMLTLLGMSVASWAAIIKRSKVISAAEREADTFEDRFWSGMDL 63
Query: 70 ETVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + +K + G+ IF + +E+ + +P + + R M VA+ARE++
Sbjct: 64 GALYQDVKKRKDDIYGIEEIFYAGFTEFARLRKTNPGAPDFVMEGTGRAMRVAVAREVDS 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ L FL ++ S +G+ G V G+M F ++ + + PGI E+LI+ +GL
Sbjct: 124 LETSLPFLATVGSISPYIGLFGTVWGIMHAFIALGEVKQATLAMVAPGIAEALIATAIGL 183
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ +AYN+ K F+ EF IL RQ
Sbjct: 184 FAAIPAVMAYNRLSNKVSKLEHTYATFSEEFHTILHRQA 222
>gi|238793894|ref|ZP_04637514.1| hypothetical protein yinte0001_25090 [Yersinia intermedia ATCC
29909]
gi|238726797|gb|EEQ18331.1| hypothetical protein yinte0001_25090 [Yersinia intermedia ATCC
29909]
Length = 228
Score = 233 bits (594), Expect = 2e-59, Method: Composition-based stats.
Identities = 72/221 (32%), Positives = 112/221 (50%), Gaps = 3/221 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
+ D++I LF+Q L VK I+ +L FSI SW++IIQ++ R FE FWSG
Sbjct: 1 MADMNILDLFLQASLFVKLIMLVLMGFSIASWAIIIQRTRILNAATRDAEAFEDKFWSGI 60
Query: 68 SLETVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
L + + + G IF S E+ + + +P + D R M +++ REL
Sbjct: 61 ELSRLYQESQARRETLGGSEQIFHSGFKEFARLHRANSHAPEAVIDGASRAMRISMNREL 120
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILL 184
E + + FLG++ S +G+ G V G+M F S+ + + PGI E+LI+ +
Sbjct: 121 EALETHIPFLGTVGSISPYIGLFGTVWGIMHAFISLGAVKQATLQMVAPGIAEALIATAI 180
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
GL +IP+ +AYN+ + K + F EF AIL RQ
Sbjct: 181 GLFAAIPAVMAYNRLNQRVNKLEQNYDNFMEEFIAILHRQA 221
>gi|253997447|ref|YP_003049511.1| protein TolQ [Methylotenera mobilis JLW8]
gi|253984126|gb|ACT48984.1| protein TolQ [Methylotenera mobilis JLW8]
Length = 224
Score = 233 bits (594), Expect = 2e-59, Method: Composition-based stats.
Identities = 67/222 (30%), Positives = 110/222 (49%), Gaps = 3/222 (1%)
Query: 7 AIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG 66
A D+S F+L L V+ ++ +L I S+ SW I K R +FE FWSG
Sbjct: 3 ASSDMSFFSLVAGASLPVQLVMLILIITSLFSWWYIFIKVATVKRAERDAEDFEDTFWSG 62
Query: 67 QSLETVCKSLKNHH--NIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARE 124
L + S+ H G+A+IF + E+ + + + + R M A RE
Sbjct: 63 GDLNKLYDSITAHRRKPQGMASIFEAGFKEYARHKQQTRMDVSDVMEGARRAMRAAYNRE 122
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISIL 183
++E+ L FL S+ S +G+ G V G+M F+ ++ + PGI E+L++
Sbjct: 123 MDELDAHLPFLASVGSVSPYIGLFGTVWGIMNAFRGLSSVGQATLTQVAPGIAEALVATA 182
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+GL +IP+ IAYN+F + +++ E F EF+ IL R++
Sbjct: 183 IGLFAAIPAVIAYNRFASSVDRLSVRYESFMEEFTNILQRKS 224
>gi|269139921|ref|YP_003296622.1| Tol-Pal system [Edwardsiella tarda EIB202]
gi|267985582|gb|ACY85411.1| Tol-Pal system [Edwardsiella tarda EIB202]
gi|304559756|gb|ADM42420.1| MotA/TolQ/ExbB proton channel family protein [Edwardsiella tarda
FL6-60]
Length = 224
Score = 233 bits (594), Expect = 2e-59, Method: Composition-based stats.
Identities = 69/218 (31%), Positives = 110/218 (50%), Gaps = 3/218 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
++I LF++ L VK I+ +L FSI SW++IIQ++ R FE FWSG L
Sbjct: 1 MNILDLFLKASLLVKLIMLVLICFSIASWAIIIQRTRILNAATRDAEAFEDKFWSGIELS 60
Query: 71 TVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ + + + G IF S E+ + + +P G+ + R M +++ RE+E +
Sbjct: 61 RLYQESQTRRDALSGSEQIFYSGFKEFARLHRMNSHAPEGVIEGASRAMRISLNREIEAM 120
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
+ FLG++ S +G+ G V G+M F + + + PGI E+LI+ +GL
Sbjct: 121 ENHIPFLGTVGSISPYIGLFGTVWGIMHAFIGLGAVKQATLQMVAPGIAEALIATAIGLF 180
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ +AYN+ K E F EF AIL RQ
Sbjct: 181 AAIPAVMAYNRLSLRVNKLEQNYENFMEEFIAILHRQA 218
>gi|33152787|ref|NP_874140.1| colicin transport protein, TolQ [Haemophilus ducreyi 35000HP]
gi|33149011|gb|AAP96529.1| colicin transport protein, TolQ [Haemophilus ducreyi 35000HP]
Length = 226
Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats.
Identities = 69/218 (31%), Positives = 109/218 (50%), Gaps = 3/218 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
++ +LFMQ + VK +I +L FSILSW++IIQ+S ++ FE FWSG L
Sbjct: 5 FNLVSLFMQASIVVKIVILILICFSILSWAIIIQRSQVLAKAKKAVVAFENKFWSGDDLH 64
Query: 71 TVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ + L+N G IF + E+ + +P R M +A+ RE+E +
Sbjct: 65 RLHERLENRREGLSGSEQIFYAGFKEFLRLQQVNPEAPEATMKGTSRAMHLALNREVESL 124
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV-SIPGIIESLISILLGLC 187
+ FLG++ S +G+ G V G+M F ++G + PGI E+LI+ +GL
Sbjct: 125 ESYIPFLGTVGSISPYIGLFGTVWGIMHSFMGLSGVKQATLQSVAPGIAEALIATAIGLF 184
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ +AYN+ + F +EF IL RQ
Sbjct: 185 AAIPAVMAYNRLNLAMNRLEQDYLNFIDEFITILHRQA 222
>gi|294637424|ref|ZP_06715715.1| protein TolQ [Edwardsiella tarda ATCC 23685]
gi|291089417|gb|EFE21978.1| protein TolQ [Edwardsiella tarda ATCC 23685]
Length = 224
Score = 232 bits (593), Expect = 3e-59, Method: Composition-based stats.
Identities = 65/218 (29%), Positives = 109/218 (50%), Gaps = 3/218 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
++I LF++ + VK I+ +L FS+ SW++IIQ++ R FE FWSG L
Sbjct: 1 MNILDLFLKASVLVKLIMLVLICFSVASWAIIIQRTRILNAATRDAEAFEDKFWSGIELS 60
Query: 71 TVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ + + + G IF + E+ + + + G+ + R M +++ RE+E +
Sbjct: 61 RLYQESQTRRDTLNGSEQIFYAGFKEFARLHRMNSHATEGVIEGASRAMRISLNREVEAL 120
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
+ FLG++ S +G+ G V G+M F + + + PGI E+LI+ +GL
Sbjct: 121 ETHIPFLGTVGSISPYIGLFGTVWGIMHAFIGLGAVKQATLQMVAPGIAEALIATAIGLF 180
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ +AYN+ K E F EF AIL RQ
Sbjct: 181 AAIPAVMAYNRLNLRVNKLEQNYENFMEEFIAILHRQA 218
>gi|254229967|ref|ZP_04923369.1| protein TolQ [Vibrio sp. Ex25]
gi|151937536|gb|EDN56392.1| protein TolQ [Vibrio sp. Ex25]
Length = 221
Score = 232 bits (592), Expect = 3e-59, Method: Composition-based stats.
Identities = 66/211 (31%), Positives = 108/211 (51%), Gaps = 3/211 (1%)
Query: 18 MQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLK 77
+Q L VK ++ L SI+SW++II++S + +FE FWSG L + + +K
Sbjct: 1 LQASLLVKLVMLTLLGMSIVSWAMIIKRSKVLSQASKNAEQFEDKFWSGTDLSQLYQKVK 60
Query: 78 NHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFL 135
+ G IF + +E+ + A SP I + R M VA++RE++E+ L FL
Sbjct: 61 ARKDEIEGTEEIFYAGFTEFARLRKSNANSPAYIMEGTGRAMRVAVSREVDELETSLPFL 120
Query: 136 GSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSI 194
++ S +G+ G V G+M F ++ + + PGI E+LI+ +GL +IP+ +
Sbjct: 121 ATVGSISPYIGLFGTVWGIMHAFIALGEVKQATLSMVAPGIAEALIATAMGLFAAIPAVM 180
Query: 195 AYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
AYN+ K F+ EF +IL RQ
Sbjct: 181 AYNRLSNKVSKLEHTYATFSEEFHSILHRQA 211
>gi|170025181|ref|YP_001721686.1| colicin uptake protein TolQ [Yersinia pseudotuberculosis YPIII]
gi|186894553|ref|YP_001871665.1| colicin uptake protein TolQ [Yersinia pseudotuberculosis PB1/+]
gi|169751715|gb|ACA69233.1| protein TolQ [Yersinia pseudotuberculosis YPIII]
gi|186697579|gb|ACC88208.1| protein TolQ [Yersinia pseudotuberculosis PB1/+]
Length = 225
Score = 232 bits (592), Expect = 3e-59, Method: Composition-based stats.
Identities = 71/221 (32%), Positives = 112/221 (50%), Gaps = 3/221 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
++I LF+Q L VK I+ +L FSI SW++IIQ++ R FE FWSG L
Sbjct: 1 MNILDLFLQASLFVKLIMLVLMGFSIASWAIIIQRTRILNAATRDAEAFEDKFWSGIELS 60
Query: 71 TVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ + + + G IF S E+ + + +P + D R M +++ RELE +
Sbjct: 61 RLYQESQARRDTLSGSEQIFHSGFKEFARLHRANSHAPEAVIDGASRAMRISMNRELEAL 120
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
+ FLG++ S +G+ G V G+M F S+ + + PGI E+LI+ +GL
Sbjct: 121 ETHIPFLGTVGSISPYIGLFGTVWGIMHAFISLGAVKQATLQMVAPGIAEALIATAIGLF 180
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
+IP+ +AYN+ + K + F EF AIL RQ +
Sbjct: 181 AAIPAVMAYNRLNQHVNKLEQNYDNFMEEFIAILHRQAFAS 221
>gi|259909073|ref|YP_002649429.1| colicin uptake protein TolQ [Erwinia pyrifoliae Ep1/96]
gi|224964695|emb|CAX56212.1| TolQ colicin import protein [Erwinia pyrifoliae Ep1/96]
gi|310767027|gb|ADP11977.1| Protein tolQ [Erwinia sp. Ejp617]
Length = 225
Score = 232 bits (592), Expect = 3e-59, Method: Composition-based stats.
Identities = 68/218 (31%), Positives = 111/218 (50%), Gaps = 3/218 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
++I LF++ L VK I+ +L FSI SW+VIIQ++ R FE FWSG L
Sbjct: 1 MNILDLFLKASLLVKLIMLILIGFSIASWAVIIQRTRILNAAVRDADAFEDKFWSGIELS 60
Query: 71 TVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ + ++ + G IF + E+ + +P + + R M +++ RELE +
Sbjct: 61 RLYQESQSRRDELGGSEQIFFAGFKEFARLHRANNHAPEAVVEGATRAMRISMNRELEAL 120
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
+ FLG++ S +G+ G V G+M F ++ + + PGI E+LI+ +GL
Sbjct: 121 ENHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMVAPGIAEALIATAIGLF 180
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ +AYN+ K + F EF+AIL RQ
Sbjct: 181 AAIPAVMAYNRLTLRVNKLEQNYDNFMEEFTAILHRQA 218
>gi|148977422|ref|ZP_01814022.1| tol biopolymer transport system, TolQ protein [Vibrionales
bacterium SWAT-3]
gi|145963374|gb|EDK28639.1| tol biopolymer transport system, TolQ protein [Vibrionales
bacterium SWAT-3]
Length = 227
Score = 232 bits (592), Expect = 3e-59, Method: Composition-based stats.
Identities = 70/219 (31%), Positives = 112/219 (51%), Gaps = 3/219 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
+ISI L ++ L VK ++ L S++SW++II++S +Q FE FWSG L
Sbjct: 4 EISILGLILEASLLVKMVMLTLMGMSVVSWAMIIKRSKVLSQASKQAEVFEDKFWSGVDL 63
Query: 70 ETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + + G IF + +E+ + A SP I + R M VA+ARE++E
Sbjct: 64 AKLYQESNKRKDELSGTEEIFYAGFTEFARLRKSNATSPDFIMEGTGRAMRVAVAREVDE 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ L FL ++ S +G+ G V G+M F ++ + + PGI E+LI+ +GL
Sbjct: 124 LETNLPFLATVGSISPYIGLFGTVWGIMHSFIALGEVKQATLAMVAPGIAEALIATAMGL 183
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ +AYN+F K F+ EF +IL RQ
Sbjct: 184 FAAIPAVMAYNRFSSSVGKLEHNYATFSEEFHSILHRQA 222
>gi|326795236|ref|YP_004313056.1| protein TolQ [Marinomonas mediterranea MMB-1]
gi|326546000|gb|ADZ91220.1| protein TolQ [Marinomonas mediterranea MMB-1]
Length = 226
Score = 232 bits (592), Expect = 3e-59, Method: Composition-based stats.
Identities = 67/221 (30%), Positives = 112/221 (50%), Gaps = 3/221 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+SI+ L + V+ ++ L + S+ SW VI Q+ + FE+ FWSG L
Sbjct: 1 MSIWGLIASASIVVQLVMLTLLLASLFSWIVIFQRVRILKRAKVVRNRFEEQFWSGIDLS 60
Query: 71 TVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ K L G+ IF S + E+ + + P + + + R M VA+ +E E++
Sbjct: 61 KLYKQLTADGRKVEGIENIFTSGIREFTRLRQGSSVEPDAVMEGVARSMRVALYKEEEKL 120
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLC 187
+ L FL ++ S +G+ G V G+M F +A + ++ PGI E+LI+ +GL
Sbjct: 121 DQHLPFLATVGSISPYIGLFGTVWGIMHSFIGLAQVQQATIATVAPGIAEALIATAIGLA 180
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
+IP+ IAYN+F + A E F++EFS+IL R+
Sbjct: 181 AAIPAVIAYNRFSAGADNLASSYENFSDEFSSILHRKVHSR 221
>gi|294678715|ref|YP_003579330.1| TolQ protein [Rhodobacter capsulatus SB 1003]
gi|294477535|gb|ADE86923.1| TolQ protein [Rhodobacter capsulatus SB 1003]
Length = 234
Score = 232 bits (591), Expect = 4e-59, Method: Composition-based stats.
Identities = 86/234 (36%), Positives = 131/234 (55%), Gaps = 7/234 (2%)
Query: 1 MNNYGLAI------MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRR 54
M+ LA+ MD S+ ALF++ L VK ++ LL + S SWS++I+K ++F R
Sbjct: 1 MDQQTLAMAAAAPEMDFSLLALFVRASLTVKLVMILLTLASFWSWSIMIRKYISFRAARA 60
Query: 55 QFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRID 114
+ F++ FWSG+ L+ + + + IF + M EW++S G Q RI+
Sbjct: 61 EADAFDRAFWSGEPLDELFDQIGPAPDGASQRIFAAGMLEWRRSHRHDGELITGAQARIE 120
Query: 115 RMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIP 173
R MDVAIA+E E + LSFL ++ S VG+ G V G+ F+ IA + ++ V P
Sbjct: 121 RSMDVAIAKEGEALNSGLSFLATVGSTAPFVGLFGTVWGIKVAFEEIAISQNTSLAVVAP 180
Query: 174 GIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEG 227
GI E+L++ +GL +IP+ IAYNK D+ + E FA+EFS I SRQ +
Sbjct: 181 GISEALVATAIGLVAAIPAVIAYNKLSSDADEITSGYEAFADEFSTIPSRQLDA 234
>gi|296117352|ref|ZP_06835942.1| protein TolQ [Gluconacetobacter hansenii ATCC 23769]
gi|295976118|gb|EFG82906.1| protein TolQ [Gluconacetobacter hansenii ATCC 23769]
Length = 254
Score = 232 bits (591), Expect = 5e-59, Method: Composition-based stats.
Identities = 77/220 (35%), Positives = 126/220 (57%), Gaps = 3/220 (1%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLET 71
S+++LF+Q + VK ++ L + S++ W++I K V + RQ +FE+ FW+G SLE
Sbjct: 34 SLWSLFLQAAIVVKLVMMGLVVSSVIVWAIIFDKIVTIRRVNRQASDFEERFWAGGSLED 93
Query: 72 VCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARS--PIGIQDRIDRMMDVAIARELEEIT 129
+ +S +AA+F +AM EW++S G+QDR++R M + I RE++ +
Sbjct: 94 LYESDGAKPIHPMAAVFGAAMGEWRRSSRITGIDLVHGGVQDRVNRAMSITITREMDRLN 153
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCV 188
L F+ ++ +G+ G V G+M F SIA ++ N+ V PGI E+L + +GL
Sbjct: 154 RWLIFVATIGPVAPFIGLFGTVWGIMHAFGSIAAMHNTNLSVVAPGISEALFATAIGLVT 213
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
+IP+ IAYN F +++ F EF+AILSRQ+E
Sbjct: 214 AIPAVIAYNVIGNSLGVFEDRLDAFGTEFAAILSRQSEER 253
>gi|89068043|ref|ZP_01155460.1| proton transporter TolQ [Oceanicola granulosus HTCC2516]
gi|89046282|gb|EAR52339.1| proton transporter TolQ [Oceanicola granulosus HTCC2516]
Length = 224
Score = 231 bits (590), Expect = 5e-59, Method: Composition-based stats.
Identities = 85/222 (38%), Positives = 125/222 (56%), Gaps = 1/222 (0%)
Query: 7 AIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG 66
A D S++ALF + LAVK ++ LL SI W+VI+ K + + R + F++ FWSG
Sbjct: 3 AATDFSMWALFARATLAVKFVMILLIGASIWCWAVIVDKWLQYQRARAEAARFDRSFWSG 62
Query: 67 QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
+ L+ + + + IF + M+EW++S + G Q RIDR MDVAIA+E
Sbjct: 63 EPLDGLYEEIGPTPKGQSQKIFAAGMTEWRRSHRQDGGLIAGAQARIDRSMDVAIAKEAG 122
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLG 185
+ L L ++ S +G+LG V G+M F IA + N+ V PGI E+L++ LG
Sbjct: 123 RLQRGLPVLATVGSTAPFIGLLGTVWGIMNAFIEIAEQQNTNLAVVAPGIAEALLATGLG 182
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEG 227
L +IP+ I YNK D+ + E FA+EFS ILSRQ +G
Sbjct: 183 LLAAIPAVIFYNKLSADADRIVSGYEAFADEFSTILSRQLDG 224
>gi|1685077|gb|AAC44594.1| TolQ [Haemophilus influenzae]
Length = 220
Score = 231 bits (589), Expect = 6e-59, Method: Composition-based stats.
Identities = 65/217 (29%), Positives = 112/217 (51%), Gaps = 3/217 (1%)
Query: 15 ALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCK 74
LF++ + V+ +I +L FSI+SW++IIQ+S ++ FE FWSG+ L + +
Sbjct: 1 DLFLKASIVVQLVIVILISFSIISWAIIIQRSRILTNALKEAHTFEDRFWSGEDLNKLYE 60
Query: 75 SLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKL 132
L N + G IF E+ + +P I R M++A+ RE+E + ++
Sbjct: 61 GLSNRRDGLTGSEQIFCVGFKEFSRLKQVNPDAPEAIIKGTTRAMNLAMNREIESLENRV 120
Query: 133 SFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIP 191
FL +++S +G+ G V G+M F +++G + + PGI E+L++ +GL +IP
Sbjct: 121 PFLATVASVSPYIGLFGTVWGIMHAFMALSGAKQATLQMVAPGIAEALVATAIGLFAAIP 180
Query: 192 SSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
+ +AYN+ F +EF+ IL RQ G
Sbjct: 181 AVMAYNRLSLRVNAIEQDYVNFIDEFTTILHRQAFGK 217
>gi|90412126|ref|ZP_01220132.1| Putative TolQ protein [Photobacterium profundum 3TCK]
gi|90326850|gb|EAS43235.1| Putative TolQ protein [Photobacterium profundum 3TCK]
Length = 228
Score = 231 bits (589), Expect = 6e-59, Method: Composition-based stats.
Identities = 65/219 (29%), Positives = 109/219 (49%), Gaps = 3/219 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
++SI LF+Q L VK ++ +L S+ SW++II++S + FE FWSG L
Sbjct: 4 ELSILDLFLQASLLVKIVMLILLGMSVASWAMIIKRSQILSNAASKAERFEDRFWSGVDL 63
Query: 70 ETVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ K ++ + G IF + E+ + + P + + R M V++ RE++E
Sbjct: 64 SQLYKEVEARKDDLMGSEQIFYTGFKEYARLHRSNGQVPDAVMEGTSRAMRVSLLREVDE 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ L FL ++ S +G+ G V G+M F ++ + + PGI E+L++ +GL
Sbjct: 124 LETSLPFLATVGSISPYIGLFGTVWGIMHAFIALGAVKQATLAMVAPGIAEALVATAMGL 183
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ + YNK K F EFS+IL RQ
Sbjct: 184 FAAIPAVMFYNKLTNQVSKLEHTYATFMEEFSSILHRQA 222
>gi|332188251|ref|ZP_08389979.1| protein TolQ [Sphingomonas sp. S17]
gi|332011750|gb|EGI53827.1| protein TolQ [Sphingomonas sp. S17]
Length = 219
Score = 231 bits (589), Expect = 7e-59, Method: Composition-based stats.
Identities = 64/217 (29%), Positives = 117/217 (53%), Gaps = 2/217 (0%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+S ALF+Q VK ++ L + SI +W++I+ S ++ FE+ FW + ++
Sbjct: 1 MSPVALFLQADWVVKFVMIGLLLASIWTWTIIVAFSRKLARTKKGMTRFERDFWKAEDID 60
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
++ + + A +F + + EW++S G G ++R+ M A+A E++++++
Sbjct: 61 -AFHRMEQDNELPSARVFSAGVQEWRRSTAGGHIDRDGTRERLATAMGSAVAGEIDKLSD 119
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVS 189
+L+ L ++ S VG+ G V G+M F IA ++++ V PGI E+L + +GL +
Sbjct: 120 RLNVLATVGSVAPFVGLFGTVWGIMRSFTGIAQAQNSSLAVVAPGIAEALFATAIGLFAA 179
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
IP+ IAYN+F K + FA+ F LSRQ +
Sbjct: 180 IPAVIAYNRFSHGVNKVEASLNRFADGFHTTLSRQLD 216
>gi|197106550|ref|YP_002131927.1| MotA/TolQ/ExbB proton channel family protein [Phenylobacterium
zucineum HLK1]
gi|196479970|gb|ACG79498.1| MotA/TolQ/ExbB proton channel family protein [Phenylobacterium
zucineum HLK1]
Length = 404
Score = 231 bits (589), Expect = 7e-59, Method: Composition-based stats.
Identities = 72/229 (31%), Positives = 116/229 (50%), Gaps = 4/229 (1%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
M+ + +I LF Q VK ++ L + S+ SW++I+ K F L R+ FE
Sbjct: 172 MDPAAVTPESFNIVNLFFQADWVVKLVMIGLALASLWSWTIILDKLFRFAALNREATRFE 231
Query: 61 QLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIG---IQDRIDRMM 117
SG+SLE V L + A+ EW+ + KG + + RIDR +
Sbjct: 232 DQVASGRSLEDVAAEAGERPAHALPRMLQGALKEWRDARQKGPPTEAQVAFLIQRIDRHL 291
Query: 118 DVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGII 176
D IARE + L L +++A +G+ G V G+M FQ+IA + ++ V P I
Sbjct: 292 DAVIARESARVENGLGALAIVATASPFIGLFGTVWGIMNSFQAIAIQKNTSLAVVAPAIA 351
Query: 177 ESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
E+L + +GL +IP+ IA+N F + K+A ++EGFA++ S + R+
Sbjct: 352 EALFATAIGLVAAIPAYIAFNAFSTSAGKYAARLEGFADDLSTAIQRRL 400
>gi|167470907|ref|ZP_02335611.1| protein TolQ [Yersinia pestis FV-1]
Length = 225
Score = 231 bits (589), Expect = 7e-59, Method: Composition-based stats.
Identities = 70/221 (31%), Positives = 112/221 (50%), Gaps = 3/221 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
++I LF+Q L VK I+ +L FSI SW++IIQ++ R F+ FWSG L
Sbjct: 1 MNILDLFLQASLFVKLIMLVLMGFSIASWAIIIQRTRILNAATRDAEAFKDKFWSGIELS 60
Query: 71 TVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ + + + G IF S E+ + + +P + D R M +++ RELE +
Sbjct: 61 RLYQESQARRDTLSGSEQIFHSGFKEFARLHRANSHAPEAVIDGASRAMRISMNRELEAL 120
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
+ FLG++ S +G+ G V G+M F S+ + + PGI E+LI+ +GL
Sbjct: 121 ETHIPFLGTVGSISPYIGLFGTVWGIMHAFISLGAVKQATLQMVAPGIAEALIATAIGLF 180
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
+IP+ +AYN+ + K + F EF AIL RQ +
Sbjct: 181 AAIPAVMAYNRLNQHVNKLEQNYDNFMEEFIAILHRQAFAS 221
>gi|83719386|ref|YP_441922.1| tolQ protein [Burkholderia thailandensis E264]
gi|167580766|ref|ZP_02373640.1| tolQ protein [Burkholderia thailandensis TXDOH]
gi|167618869|ref|ZP_02387500.1| tolQ protein [Burkholderia thailandensis Bt4]
gi|167837691|ref|ZP_02464574.1| tolQ protein [Burkholderia thailandensis MSMB43]
gi|257138093|ref|ZP_05586355.1| tolQ protein [Burkholderia thailandensis E264]
gi|83653211|gb|ABC37274.1| tolQ protein [Burkholderia thailandensis E264]
Length = 225
Score = 230 bits (588), Expect = 8e-59, Method: Composition-based stats.
Identities = 72/221 (32%), Positives = 118/221 (53%), Gaps = 3/221 (1%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
D+SI +L + + + ++ LL + S++SW+ I +K R Q FE+ FWSG
Sbjct: 5 QDLSIISLVLNASVLAQAVMGLLLVLSLMSWTFIFRKWFAIRRARAQTERFERDFWSGGD 64
Query: 69 LETVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
L+ + +S N+ + L IF S M E+ K+ +K P + D R M + RE++
Sbjct: 65 LQALYQSAANNRHTIGALERIFESGMREFLKAKEKRLNDPALLLDGARRAMRASFQREMD 124
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV-SIPGIIESLISILLG 185
+ LSFL S+ S +G+ G V G+M F+ +A + PGI E+L++ +G
Sbjct: 125 VLESNLSFLASVGSVSPYIGLFGTVWGIMNSFRGLANVQQATLANVAPGIAEALVATAIG 184
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
L +IP+ +AYN++ D + A++ E F EFS IL RQ +
Sbjct: 185 LFAAIPAVVAYNRYAHDIDRLAIRFETFIEEFSNILQRQAQ 225
>gi|217977107|ref|YP_002361254.1| protein TolQ [Methylocella silvestris BL2]
gi|217502483|gb|ACK49892.1| protein TolQ [Methylocella silvestris BL2]
Length = 248
Score = 230 bits (588), Expect = 9e-59, Method: Composition-based stats.
Identities = 87/243 (35%), Positives = 144/243 (59%), Gaps = 13/243 (5%)
Query: 1 MNNYGLAIM-----------DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNF 49
MN +A ++S+ ++F + VK ++ L S+ W++II K +
Sbjct: 1 MNPADIAATGVAATGFAQGSEVSLLSMFWSAHIVVKLVMLGLLAASVWCWAIIINKVILL 60
Query: 50 ITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSP-IG 108
+R +FE++FWSG SL+ + +L G+A++F++AM EW++S A S +G
Sbjct: 61 RRTQRAIDQFEEVFWSGASLDELYTTLSARPTSGMASLFVAAMREWRRSVQGAATSTFMG 120
Query: 109 IQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN 168
+Q RI++++DV+IARE+E++ L L +++SA +G+ G V G+M F+SIA + +
Sbjct: 121 LQARIEKVLDVSIAREVEKLESNLLVLATVASASPFIGLFGTVWGIMSSFRSIAASRNTS 180
Query: 169 V-VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEG 227
+ V PGI E+L + +GL +IP+ IAYNK D K Q+EGFA+EFS+ILSRQ +
Sbjct: 181 LAVVAPGIAEALFATAIGLFAAIPALIAYNKLQGDVAKKQAQLEGFADEFSSILSRQIDQ 240
Query: 228 NIS 230
+
Sbjct: 241 RAA 243
>gi|238756019|ref|ZP_04617343.1| hypothetical protein yruck0001_31500 [Yersinia ruckeri ATCC 29473]
gi|238705744|gb|EEP98137.1| hypothetical protein yruck0001_31500 [Yersinia ruckeri ATCC 29473]
Length = 225
Score = 230 bits (588), Expect = 1e-58, Method: Composition-based stats.
Identities = 71/218 (32%), Positives = 110/218 (50%), Gaps = 3/218 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
++I LF+Q L VK I+ +L FSI SW++IIQ++ R FE FWSG L
Sbjct: 1 MNILDLFLQASLFVKLIMLVLMGFSIASWAIIIQRTRVLNAATRDAEAFEDKFWSGIELS 60
Query: 71 TVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ + + + G IF S E+ + + +P + D R M +++ RELE +
Sbjct: 61 RLYQESQARRDTLGGSEQIFHSGFKEFARLHRANSHAPEAVIDGASRAMRISMNRELEAL 120
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
+ FLG++ S +G+ G V G+M F S+ + + PGI E+LI+ +GL
Sbjct: 121 ENHIPFLGTVGSISPYIGLFGTVWGIMHAFISLGAVKQATLQMVAPGIAEALIATAIGLF 180
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ +AYN+ K + F EF AIL RQ
Sbjct: 181 AAIPAVMAYNRLNLHVSKLEQNYDNFMEEFIAILHRQA 218
>gi|119944495|ref|YP_942175.1| MotA/TolQ/ExbB proton channel [Psychromonas ingrahamii 37]
gi|119863099|gb|ABM02576.1| MotA/TolQ/ExbB proton channel [Psychromonas ingrahamii 37]
Length = 227
Score = 230 bits (587), Expect = 1e-58, Method: Composition-based stats.
Identities = 64/219 (29%), Positives = 106/219 (48%), Gaps = 3/219 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S LF+Q VK ++ LL SI SW++I ++ N + + + FE+ FWSG L
Sbjct: 4 DMSFLGLFLQASWLVKFVLILLLGMSIYSWTLIFSRTKNLKSSEKALKLFEERFWSGHDL 63
Query: 70 ETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ K G IF E+ + R+ + R+M V ++RE++E
Sbjct: 64 SRLYKESAARSERITGGEKIFHGGFKEFSRLHRIPGRTVDSTTEGAHRIMRVTLSREIDE 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
+ L L ++ S +G+ G V G+M F ++ + + PGI E+LI+ +GL
Sbjct: 124 LETGLPVLATIGSISPYIGLFGTVWGIMNSFIALGEVQQATLTMVAPGIAEALIATAMGL 183
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ +AYN+F K EF++IL RQ+
Sbjct: 184 FAAIPAVMAYNRFSTQVGKLETAYINLMEEFTSILHRQS 222
>gi|17545451|ref|NP_518853.1| TOLQ-like transport transmembrane protein [Ralstonia solanacearum
GMI1000]
gi|17427743|emb|CAD14262.1| probable tolq-related transport transmembrane protein [Ralstonia
solanacearum GMI1000]
gi|299067722|emb|CBJ38931.1| Protein tolQ, essential components of the Tol-Pal system [Ralstonia
solanacearum CMR15]
Length = 230
Score = 230 bits (587), Expect = 1e-58, Method: Composition-based stats.
Identities = 77/231 (33%), Positives = 121/231 (52%), Gaps = 6/231 (2%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
MN + D+SI +L + L V+ ++ LL + S+ SW+ I +K+ R Q FE
Sbjct: 1 MNPVEV-TQDLSIVSLVLHASLLVQFVMGLLLVMSLFSWTYIFRKAFALRAARAQTESFE 59
Query: 61 QLFWSGQSLETVCKSLKN--HHNIGLAAIFMSAMSEWKKSCDK--GARSPIGIQDRIDRM 116
+ FW+G L+ + +S N HH L IF + M E+ K+ ++ G P I D R
Sbjct: 60 RDFWAGGDLQAMYQSAANNRHHTGALERIFEAGMREYLKTREQQRGVGDPSAILDAARRA 119
Query: 117 MDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGI 175
M A RE++ + L FL S+ S +G+ G V G+M F+ ++ + PGI
Sbjct: 120 MRAAYQREMDSLESHLPFLASVGSVSPYIGLFGTVWGIMNAFRGLSNVQQATLSAVAPGI 179
Query: 176 IESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
E+L++ +GL +IP+ IAYN++ + + A + E F EFS IL RQT
Sbjct: 180 AEALVATAIGLFAAIPAVIAYNRYATEMDRLANRFESFMEEFSNILQRQTR 230
>gi|167563916|ref|ZP_02356832.1| tolQ protein [Burkholderia oklahomensis EO147]
gi|167571051|ref|ZP_02363925.1| tolQ protein [Burkholderia oklahomensis C6786]
Length = 225
Score = 230 bits (587), Expect = 1e-58, Method: Composition-based stats.
Identities = 73/221 (33%), Positives = 118/221 (53%), Gaps = 3/221 (1%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
D+SI +L + + + ++ LL I S++SW+ I +K R Q FE+ FWSG
Sbjct: 5 QDLSIISLVLNASVLAQAVMGLLLILSLMSWTFIFRKWFAIRRARAQTERFERDFWSGGD 64
Query: 69 LETVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
L+ + +S N+ + L IF S M E+ K+ +K P + D R M + RE++
Sbjct: 65 LQALYQSAANNRHTIGALERIFESGMREFLKAKEKRLSDPALLLDGARRAMRASFQREMD 124
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV-SIPGIIESLISILLG 185
+ LSFL S+ S +G+ G V G+M F+ +A + PGI E+L++ +G
Sbjct: 125 VLESNLSFLASVGSVSPYIGLFGTVWGIMNSFRGLANVQQATLANVAPGIAEALVATAIG 184
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
L +IP+ +AYN++ D + A++ E F EFS IL RQ +
Sbjct: 185 LFAAIPAVVAYNRYAHDIDRLAIRFETFIEEFSNILQRQAQ 225
>gi|53725622|ref|YP_103657.1| tolQ protein [Burkholderia mallei ATCC 23344]
gi|67643923|ref|ZP_00442666.1| protein TolQ [Burkholderia mallei GB8 horse 4]
gi|121600116|ref|YP_992170.1| tolQ protein [Burkholderia mallei SAVP1]
gi|124383938|ref|YP_001028616.1| tolQ protein [Burkholderia mallei NCTC 10229]
gi|126441853|ref|YP_001060212.1| MotA/TolQ/ExbB proton channel family protein [Burkholderia
pseudomallei 668]
gi|126448943|ref|YP_001081483.1| tolQ protein [Burkholderia mallei NCTC 10247]
gi|126452711|ref|YP_001067476.1| MotA/TolQ/ExbB proton channel family protein [Burkholderia
pseudomallei 1106a]
gi|166998273|ref|ZP_02264133.1| protein TolQ [Burkholderia mallei PRL-20]
gi|167720987|ref|ZP_02404223.1| tolQ protein [Burkholderia pseudomallei DM98]
gi|167739944|ref|ZP_02412718.1| tolQ protein [Burkholderia pseudomallei 14]
gi|167817181|ref|ZP_02448861.1| tolQ protein [Burkholderia pseudomallei 91]
gi|167825594|ref|ZP_02457065.1| tolQ protein [Burkholderia pseudomallei 9]
gi|167847078|ref|ZP_02472586.1| tolQ protein [Burkholderia pseudomallei B7210]
gi|167895662|ref|ZP_02483064.1| tolQ protein [Burkholderia pseudomallei 7894]
gi|167904055|ref|ZP_02491260.1| tolQ protein [Burkholderia pseudomallei NCTC 13177]
gi|167912312|ref|ZP_02499403.1| tolQ protein [Burkholderia pseudomallei 112]
gi|167920269|ref|ZP_02507360.1| tolQ protein [Burkholderia pseudomallei BCC215]
gi|226194311|ref|ZP_03789910.1| protein TolQ [Burkholderia pseudomallei Pakistan 9]
gi|237813602|ref|YP_002898053.1| protein TolQ [Burkholderia pseudomallei MSHR346]
gi|242314143|ref|ZP_04813159.1| protein TolQ [Burkholderia pseudomallei 1106b]
gi|254175704|ref|ZP_04882364.1| tolQ protein [Burkholderia mallei ATCC 10399]
gi|254180827|ref|ZP_04887425.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei 1655]
gi|254191665|ref|ZP_04898168.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei Pasteur 52237]
gi|254194925|ref|ZP_04901355.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei S13]
gi|254202354|ref|ZP_04908717.1| protein TolQ [Burkholderia mallei FMH]
gi|254207688|ref|ZP_04914038.1| protein TolQ [Burkholderia mallei JHU]
gi|254260751|ref|ZP_04951805.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei 1710a]
gi|254299062|ref|ZP_04966512.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei 406e]
gi|254356410|ref|ZP_04972686.1| protein TolQ [Burkholderia mallei 2002721280]
gi|52429045|gb|AAU49638.1| tolQ protein [Burkholderia mallei ATCC 23344]
gi|121228926|gb|ABM51444.1| tolQ protein [Burkholderia mallei SAVP1]
gi|124291958|gb|ABN01227.1| protein TolQ [Burkholderia mallei NCTC 10229]
gi|126221346|gb|ABN84852.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei 668]
gi|126226353|gb|ABN89893.1| protein TolQ [Burkholderia pseudomallei 1106a]
gi|126241813|gb|ABO04906.1| protein TolQ [Burkholderia mallei NCTC 10247]
gi|147746601|gb|EDK53678.1| protein TolQ [Burkholderia mallei FMH]
gi|147751582|gb|EDK58649.1| protein TolQ [Burkholderia mallei JHU]
gi|148025407|gb|EDK83561.1| protein TolQ [Burkholderia mallei 2002721280]
gi|157808950|gb|EDO86120.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei 406e]
gi|157939336|gb|EDO95006.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei Pasteur 52237]
gi|160696748|gb|EDP86718.1| tolQ protein [Burkholderia mallei ATCC 10399]
gi|169651674|gb|EDS84367.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei S13]
gi|184211366|gb|EDU08409.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei 1655]
gi|225933776|gb|EEH29764.1| protein TolQ [Burkholderia pseudomallei Pakistan 9]
gi|237504440|gb|ACQ96758.1| protein TolQ [Burkholderia pseudomallei MSHR346]
gi|238525392|gb|EEP88820.1| protein TolQ [Burkholderia mallei GB8 horse 4]
gi|242137382|gb|EES23784.1| protein TolQ [Burkholderia pseudomallei 1106b]
gi|243065353|gb|EES47539.1| protein TolQ [Burkholderia mallei PRL-20]
gi|254219440|gb|EET08824.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei 1710a]
Length = 225
Score = 230 bits (587), Expect = 1e-58, Method: Composition-based stats.
Identities = 72/221 (32%), Positives = 118/221 (53%), Gaps = 3/221 (1%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
D+SI +L + + + ++ LL + S++SW+ I +K R Q FE+ FWSG
Sbjct: 5 QDLSIISLVLNASVLAQAVMGLLLVLSLMSWTFIFRKWFAIRRARAQTERFERDFWSGGD 64
Query: 69 LETVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
L+ + +S N+ + L IF S M E+ K+ +K P + D R M + RE++
Sbjct: 65 LQALYQSAANNRHTIGALERIFESGMREFLKAKEKRLSDPALLLDGARRAMRASFQREMD 124
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV-SIPGIIESLISILLG 185
+ LSFL S+ S +G+ G V G+M F+ +A + PGI E+L++ +G
Sbjct: 125 VLESNLSFLASVGSVSPYIGLFGTVWGIMNSFRGLANVQQATLANVAPGIAEALVATAIG 184
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
L +IP+ +AYN++ D + A++ E F EFS IL RQ +
Sbjct: 185 LFAAIPAVVAYNRYAHDIDRLAIRFETFIEEFSNILQRQAQ 225
>gi|327393163|dbj|BAK10585.1| protein TolQ [Pantoea ananatis AJ13355]
Length = 225
Score = 230 bits (586), Expect = 1e-58, Method: Composition-based stats.
Identities = 66/218 (30%), Positives = 110/218 (50%), Gaps = 3/218 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+++ LF++ L VK I+ +L FSI SW++IIQ++ R+ FE FWSG L
Sbjct: 1 MNVLDLFLKASLLVKLIMLILIGFSIASWAIIIQRTRILNAAGREADAFEDKFWSGVELS 60
Query: 71 TVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ + + G IF + E+ + +P + R M +++ RELE +
Sbjct: 61 RLYQESQARREELAGSEQIFYAGFKEFARLHRVNNHAPEAAVEGASRAMRISMNRELEAL 120
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
+ FLG++ S +G+ G V G+M F ++ + + PGI E+LI+ +GL
Sbjct: 121 ENHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMVAPGIAEALIATAIGLF 180
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ +AYN+ + K + F EF+AIL RQ
Sbjct: 181 AAIPAVMAYNRLNQRVNKLEQGYDNFMEEFTAILHRQA 218
>gi|301155735|emb|CBW15203.1| membrane spanning protein in TolA-TolQ-TolR complex [Haemophilus
parainfluenzae T3T1]
Length = 228
Score = 230 bits (586), Expect = 1e-58, Method: Composition-based stats.
Identities = 68/222 (30%), Positives = 115/222 (51%), Gaps = 3/222 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
+++ LF++ + V+ +I +L FSI+SW++IIQ+S T ++ FE FWSG+ L
Sbjct: 4 ELNFLDLFLKASIVVQLVIVILISFSIISWAIIIQRSRILTTALKEANTFEDRFWSGEDL 63
Query: 70 ETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ L N G IF E+ + A +P I R M++A+ RE+E
Sbjct: 64 NKLYDGLSNRREVLTGSEQIFFVGFKEFSRLKQVNANAPEAIIKGTTRAMNLAMNREVEA 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
+ ++ FL +++S +G+ G V G+M F +++G + + PGI E+LI+ +GL
Sbjct: 124 LESRVPFLATVASVSPYIGLFGTVWGIMHAFMALSGAKQATLQMVAPGIAEALIATAIGL 183
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
+IP+ +AYN+ F +EF+ IL RQ G
Sbjct: 184 FAAIPAVMAYNRLSLRVNAIEQNYGNFIDEFTTILHRQAFGK 225
>gi|304393327|ref|ZP_07375255.1| protein TolQ [Ahrensia sp. R2A130]
gi|303294334|gb|EFL88706.1| protein TolQ [Ahrensia sp. R2A130]
Length = 265
Score = 230 bits (586), Expect = 1e-58, Method: Composition-based stats.
Identities = 107/229 (46%), Positives = 159/229 (69%), Gaps = 3/229 (1%)
Query: 5 GLAI--MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQL 62
GLA +D S+ LF++ GL VK ++ L + SI W++I+ K + F ++RQ +FEQ+
Sbjct: 36 GLAAPTVDTSLIGLFLEAGLVVKIVMIGLIVASIWCWAIIVDKMLLFGRVKRQIDQFEQV 95
Query: 63 FWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIA 122
FWSGQSLE + ++L G+AA+F++AM EWK+S ++ ARSPIG+Q RID+ +DVA++
Sbjct: 96 FWSGQSLEQLYQTLSMQQQTGMAALFVAAMGEWKRSFERNARSPIGLQTRIDKQLDVAMS 155
Query: 123 RELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLIS 181
+E+E + ++L FL ++ SA VG+ G V+G+M FQ+IAG S N+ V PGI E+L++
Sbjct: 156 KEMETLEKRLLFLATLGSAAPFVGLFGTVVGIMTSFQAIAGSKSTNLAVVAPGIAEALLA 215
Query: 182 ILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
LGL +IP+ IAYNK D+ K +MEGFA+EFSAILSRQ + +
Sbjct: 216 TALGLLAAIPAVIAYNKLSADAGKIGNRMEGFADEFSAILSRQVDEKSA 264
>gi|54309714|ref|YP_130734.1| putative TolQ protein [Photobacterium profundum SS9]
gi|46914152|emb|CAG20932.1| Putative TolQ protein [Photobacterium profundum SS9]
Length = 228
Score = 230 bits (586), Expect = 2e-58, Method: Composition-based stats.
Identities = 65/219 (29%), Positives = 109/219 (49%), Gaps = 3/219 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
++SI LF+Q L VK ++ +L S+ SW++II++S + FE FWSG L
Sbjct: 4 ELSILDLFLQASLLVKIVMLILLGMSVASWAMIIKRSQILSNAASKAGRFEDRFWSGVDL 63
Query: 70 ETVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ K ++ + G IF + E+ + + P + + R M V++ RE++E
Sbjct: 64 SQLYKEVEARKDDLMGSEQIFYTGFKEYARLHRSNGQVPDAVMEGTSRAMRVSLLREVDE 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ L FL ++ S +G+ G V G+M F ++ + + PGI E+L++ +GL
Sbjct: 124 LETSLPFLATVGSISPYIGLFGTVWGIMHAFIALGAVKQATLAMVAPGIAEALVATAMGL 183
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ + YNK K F EFS+IL RQ
Sbjct: 184 FAAIPAVMFYNKLTNQVSKLEHTYATFMEEFSSILHRQA 222
>gi|226938987|ref|YP_002794058.1| TolQ [Laribacter hongkongensis HLHK9]
gi|226713911|gb|ACO73049.1| TolQ [Laribacter hongkongensis HLHK9]
Length = 225
Score = 230 bits (586), Expect = 2e-58, Method: Composition-based stats.
Identities = 75/221 (33%), Positives = 117/221 (52%), Gaps = 2/221 (0%)
Query: 7 AIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG 66
A +S+ L + L V+ I+ LL S+LSW+ I+ K+V T RR +FE+ FWSG
Sbjct: 3 ATQSLSVVQLILDASLPVQLIMALLVAMSVLSWTRILTKAVEVRTARRHTEDFERAFWSG 62
Query: 67 QSLETVCKSLKNHHN-IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
L + + + + IG+ IF S +E+ K + I D R M A REL
Sbjct: 63 TDLNHIYQQVSAKPDGIGMEKIFQSGFAEFLKLRRQPGGELSDIMDGTRRAMKAAAQREL 122
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILL 184
+++ SFL ++ S +G+ G V G+M F + + + ++ PGI E+LI+ +
Sbjct: 123 DDLDRHTSFLATVGSVSPYIGLFGTVWGIMHAFIGLGNAGNATLATVAPGIAEALIATAI 182
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
GL +IP+ +AYN+F D +FA + + F EFS IL RQ
Sbjct: 183 GLFAAIPAVVAYNRFAYDIDRFATRFDTFMEEFSNILQRQA 223
>gi|157825551|ref|YP_001493271.1| TolQ protein [Rickettsia akari str. Hartford]
gi|157799509|gb|ABV74763.1| TolQ protein [Rickettsia akari str. Hartford]
Length = 241
Score = 230 bits (586), Expect = 2e-58, Method: Composition-based stats.
Identities = 79/219 (36%), Positives = 127/219 (57%), Gaps = 3/219 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+S+FAL + K ++ +L I SI SW++I+ K ++R+ ++FE +FWSG LE
Sbjct: 19 LSLFALINSSDIIGKSVMLMLLITSIWSWAIILDKIFKLAQVQRRMKDFENVFWSGGVLE 78
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPI--GIQDRIDRMMDVAIARELEEI 128
+ S+K N LA IF+SAM E K KG + ++RI M +A RE+E++
Sbjct: 79 QLYDSIKRSVNNPLALIFVSAMDECKSLSTKGLSDALKNNHKERITGAMYLAQNREVEKL 138
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
+ LSFL ++ S+ VG+ G V G+M FQSIA + ++ V PGI E+L++ +GL
Sbjct: 139 EKNLSFLATVGSSAPFVGLFGTVWGIMHSFQSIATSKNTSLAVVAPGIAEALLATAIGLF 198
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ I YN I ++E F++E ++ILS+ +
Sbjct: 199 AAIPAVIFYNYLISRITLINNKIEDFSSELNSILSKAID 237
>gi|212712436|ref|ZP_03320564.1| hypothetical protein PROVALCAL_03530 [Providencia alcalifaciens DSM
30120]
gi|212684893|gb|EEB44421.1| hypothetical protein PROVALCAL_03530 [Providencia alcalifaciens DSM
30120]
Length = 227
Score = 230 bits (586), Expect = 2e-58, Method: Composition-based stats.
Identities = 69/221 (31%), Positives = 111/221 (50%), Gaps = 3/221 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
+ D++I LF++ L V+ I+ +L FSI SW++IIQ++ R+ FE FWSG
Sbjct: 1 MTDMNILDLFLKASLLVQIIMFVLIGFSIASWAIIIQRTKILNAATREAEAFEDKFWSGI 60
Query: 68 SLETVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
L + K + + G IF S E+ + +P + R M +++ REL
Sbjct: 61 ELSRLYKESQARRDALGGAEQIFYSGFKEFVRLHQANIHAPDAVVTGASRAMRISMNREL 120
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILL 184
E + + FLG++ S +G+ G V G+M F ++ + + PGI E+LI+ +
Sbjct: 121 ESVESHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMVAPGIAEALIATAI 180
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
GL +IP+ +AYN+ K + F EF AIL RQ
Sbjct: 181 GLFAAIPAVMAYNRLNLRVNKLEQSYDNFMEEFLAILHRQA 221
>gi|114562636|ref|YP_750149.1| MotA/TolQ/ExbB proton channel [Shewanella frigidimarina NCIMB 400]
gi|114333929|gb|ABI71311.1| MotA/TolQ/ExbB proton channel [Shewanella frigidimarina NCIMB 400]
Length = 229
Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats.
Identities = 70/219 (31%), Positives = 116/219 (52%), Gaps = 3/219 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
+IS LF++ + VK ++ L SI SW+VIIQ++ + R + FE+ FWSG L
Sbjct: 4 EISFIGLFLEASVLVKLVMLTLLALSIASWAVIIQRNKLLGSARVKSLRFEETFWSGVDL 63
Query: 70 ETVCKSL--KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ K L + GL ++F++ E+ + +++P + D R M V+++RE+E+
Sbjct: 64 NRLYKELIARGSAISGLESMFVAGFKEYTRLSKVNSKAPEAVMDGTSRAMRVSLSREMEK 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ L L ++ S +G+ G V G+M F ++ + + + PGI E+LI+ +GL
Sbjct: 124 LENHLPLLATIGSTSPYIGLFGTVWGIMNSFIALGAVENATLAMVAPGIAEALIATAMGL 183
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ I YN+F K M F EFS IL RQ
Sbjct: 184 FAAIPAVIGYNRFTTQVDKIEMTYANFMEEFSNILQRQA 222
>gi|325579036|ref|ZP_08148992.1| TolQ colicin import protein [Haemophilus parainfluenzae ATCC 33392]
gi|325159271|gb|EGC71405.1| TolQ colicin import protein [Haemophilus parainfluenzae ATCC 33392]
Length = 228
Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats.
Identities = 67/222 (30%), Positives = 115/222 (51%), Gaps = 3/222 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
+++ LF++ + V+ +I +L FSI+SW++IIQ+S + ++ FE FWSG+ L
Sbjct: 4 ELNFLDLFLKASIVVQLVIVILISFSIISWAIIIQRSRILTSALKEANTFEDRFWSGEDL 63
Query: 70 ETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ L N G IF E+ + A +P I R M++A+ RE+E
Sbjct: 64 NKLYDGLSNRREVLTGSEQIFFVGFKEFSRLKQVNADAPEAIIKGTTRAMNLAMNREVEA 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
+ ++ FL +++S +G+ G V G+M F +++G + + PGI E+LI+ +GL
Sbjct: 124 LESRVPFLATVASVSPYIGLFGTVWGIMHAFMALSGAKQATLQMVAPGIAEALIATAIGL 183
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
+IP+ +AYN+ F +EF+ IL RQ G
Sbjct: 184 FAAIPAVMAYNRLSLRVNAIEQNYGNFIDEFTTILHRQAFGK 225
>gi|91776694|ref|YP_546450.1| MotA/TolQ/ExbB proton channel [Methylobacillus flagellatus KT]
gi|91710681|gb|ABE50609.1| Cell division and transport-associated protein TolQ
[Methylobacillus flagellatus KT]
Length = 224
Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats.
Identities = 67/228 (29%), Positives = 115/228 (50%), Gaps = 7/228 (3%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
MN D+S +L + V+ ++ LL + S++SW I K + + + EFE
Sbjct: 1 MNP----TEDMSFISLISGASVPVQIVMALLLLTSLISWWYIFIKFFSIRSADNEAEEFE 56
Query: 61 QLFWSGQSLETVCKSL--KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMD 118
++FW G L + +S+ GLA+IF + E+ + + + + + R M
Sbjct: 57 RVFWKGGDLNQLYESVTSGRRSTQGLASIFEAGFKEYARLKRQPSLDVGDVTEGARRAMR 116
Query: 119 VAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV-SIPGIIE 177
A RE++E+ L FL S+ S +G+ G V G+M F+ +A + PGI E
Sbjct: 117 AAYNREMDELDSHLPFLASVGSVSPYIGLFGTVWGIMNAFRGLANMAQATLSHVAPGIAE 176
Query: 178 SLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+L++ +GL +IP+ IAYN+F + + A++ E F EF+ IL R+
Sbjct: 177 ALVATAIGLFAAIPAVIAYNRFTASADRLAVRYESFIEEFTNILQRKA 224
>gi|218549690|ref|YP_002383481.1| colicin uptake protein TolQ [Escherichia fergusonii ATCC 35469]
gi|218357231|emb|CAQ89866.1| membrane spanning protein in TolA-TolQ-TolR complex [Escherichia
fergusonii ATCC 35469]
gi|324114856|gb|EGC08824.1| TolQ protein [Escherichia fergusonii B253]
Length = 230
Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats.
Identities = 69/221 (31%), Positives = 116/221 (52%), Gaps = 3/221 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
+ D++I LF++ L VK I+ +L FSI SW++IIQ++ R+ FE FWSG
Sbjct: 1 MTDMNILDLFLKASLLVKLIMLILIGFSIASWAIIIQRTRILNAAAREAEAFEDKFWSGI 60
Query: 68 SLETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
L + + + + G IF S E+ + + +P + + R M +++ REL
Sbjct: 61 ELSRLYQESQGRRDNLSGSEQIFYSGFKEFVRLHRANSHAPEAVVEGASRAMRISMNREL 120
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILL 184
E + + FLG++ S +G+ G V G+M F ++ + + PGI E+LI+ +
Sbjct: 121 ENLETHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMVAPGIAEALIATAI 180
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
GL +IP+ +AYN+ + K + + F EF+AIL RQ
Sbjct: 181 GLFAAIPAVMAYNRLNQRVNKLELNYDNFMEEFTAILHRQA 221
>gi|15800453|ref|NP_286465.1| colicin uptake protein TolQ [Escherichia coli O157:H7 EDL933]
gi|15830026|ref|NP_308799.1| colicin uptake protein TolQ [Escherichia coli O157:H7 str. Sakai]
gi|16128712|ref|NP_415265.1| membrane spanning protein in TolA-TolQ-TolR complex [Escherichia
coli str. K-12 substr. MG1655]
gi|24111987|ref|NP_706497.1| colicin uptake protein TolQ [Shigella flexneri 2a str. 301]
gi|30062100|ref|NP_836271.1| colicin uptake protein TolQ [Shigella flexneri 2a str. 2457T]
gi|74311261|ref|YP_309680.1| colicin uptake protein TolQ [Shigella sonnei Ss046]
gi|82543164|ref|YP_407111.1| colicin uptake protein TolQ [Shigella boydii Sb227]
gi|89107595|ref|AP_001375.1| membrane spanning protein in TolA-TolQ-TolR complex [Escherichia
coli str. K-12 substr. W3110]
gi|157156530|ref|YP_001461898.1| colicin uptake protein TolQ [Escherichia coli E24377A]
gi|157160220|ref|YP_001457538.1| colicin uptake protein TolQ [Escherichia coli HS]
gi|168757202|ref|ZP_02782209.1| protein TolQ [Escherichia coli O157:H7 str. EC4401]
gi|168765423|ref|ZP_02790430.1| protein TolQ [Escherichia coli O157:H7 str. EC4501]
gi|168779232|ref|ZP_02804239.1| protein TolQ [Escherichia coli O157:H7 str. EC4076]
gi|168786903|ref|ZP_02811910.1| protein TolQ [Escherichia coli O157:H7 str. EC869]
gi|170080404|ref|YP_001729724.1| membrane spanning protein in TolA-TolQ-TolR complex [Escherichia
coli str. K-12 substr. DH10B]
gi|170681028|ref|YP_001742848.1| colicin uptake protein TolQ [Escherichia coli SMS-3-5]
gi|187733296|ref|YP_001879394.1| colicin uptake protein TolQ [Shigella boydii CDC 3083-94]
gi|188025332|ref|ZP_02777768.2| protein TolQ [Escherichia coli O157:H7 str. EC4113]
gi|188492595|ref|ZP_02999865.1| protein TolQ [Escherichia coli 53638]
gi|189402927|ref|ZP_02792196.2| protein TolQ [Escherichia coli O157:H7 str. EC4486]
gi|191169780|ref|ZP_03031423.1| protein TolQ [Escherichia coli B7A]
gi|194429041|ref|ZP_03061572.1| protein TolQ [Escherichia coli B171]
gi|194439232|ref|ZP_03071312.1| protein TolQ [Escherichia coli 101-1]
gi|195939089|ref|ZP_03084471.1| colicin uptake protein TolQ [Escherichia coli O157:H7 str. EC4024]
gi|208805902|ref|ZP_03248239.1| protein TolQ [Escherichia coli O157:H7 str. EC4206]
gi|208815454|ref|ZP_03256633.1| protein TolQ [Escherichia coli O157:H7 str. EC4045]
gi|208823284|ref|ZP_03263602.1| protein TolQ [Escherichia coli O157:H7 str. EC4042]
gi|209398857|ref|YP_002269371.1| protein TolQ [Escherichia coli O157:H7 str. EC4115]
gi|209917988|ref|YP_002292072.1| colicin uptake protein TolQ [Escherichia coli SE11]
gi|217326027|ref|ZP_03442111.1| protein TolQ [Escherichia coli O157:H7 str. TW14588]
gi|218553264|ref|YP_002386177.1| colicin uptake protein TolQ [Escherichia coli IAI1]
gi|218694161|ref|YP_002401828.1| colicin uptake protein TolQ [Escherichia coli 55989]
gi|218699109|ref|YP_002406738.1| colicin uptake protein TolQ [Escherichia coli IAI39]
gi|218704064|ref|YP_002411583.1| colicin uptake protein TolQ [Escherichia coli UMN026]
gi|238900002|ref|YP_002925798.1| membrane spanning protein in TolA-TolQ-TolR complex [Escherichia
coli BW2952]
gi|253774292|ref|YP_003037123.1| colicin uptake protein TolQ [Escherichia coli 'BL21-Gold(DE3)pLysS
AG']
gi|254160807|ref|YP_003043915.1| colicin uptake protein TolQ [Escherichia coli B str. REL606]
gi|254791894|ref|YP_003076731.1| colicin uptake protein TolQ [Escherichia coli O157:H7 str. TW14359]
gi|256023660|ref|ZP_05437525.1| colicin uptake protein TolQ [Escherichia sp. 4_1_40B]
gi|260842943|ref|YP_003220721.1| membrane spanning protein TolQ [Escherichia coli O103:H2 str.
12009]
gi|260853972|ref|YP_003227863.1| membrane spanning protein TolQ [Escherichia coli O26:H11 str.
11368]
gi|260866868|ref|YP_003233270.1| membrane spanning protein TolQ [Escherichia coli O111:H- str.
11128]
gi|261224448|ref|ZP_05938729.1| membrane spanning protein in TolA-TolQ-TolR complex [Escherichia
coli O157:H7 str. FRIK2000]
gi|261254561|ref|ZP_05947094.1| membrane spanning protein TolQ [Escherichia coli O157:H7 str.
FRIK966]
gi|291281680|ref|YP_003498498.1| Inner membrane protein [Escherichia coli O55:H7 str. CB9615]
gi|300816386|ref|ZP_07096608.1| protein TolQ [Escherichia coli MS 107-1]
gi|300822974|ref|ZP_07103109.1| protein TolQ [Escherichia coli MS 119-7]
gi|300900744|ref|ZP_07118893.1| protein TolQ [Escherichia coli MS 198-1]
gi|300906996|ref|ZP_07124665.1| protein TolQ [Escherichia coli MS 84-1]
gi|300918398|ref|ZP_07134998.1| protein TolQ [Escherichia coli MS 115-1]
gi|300926141|ref|ZP_07141954.1| protein TolQ [Escherichia coli MS 182-1]
gi|300929457|ref|ZP_07144925.1| protein TolQ [Escherichia coli MS 187-1]
gi|300937792|ref|ZP_07152588.1| protein TolQ [Escherichia coli MS 21-1]
gi|300947182|ref|ZP_07161392.1| protein TolQ [Escherichia coli MS 116-1]
gi|300957686|ref|ZP_07169875.1| protein TolQ [Escherichia coli MS 175-1]
gi|301020791|ref|ZP_07184855.1| protein TolQ [Escherichia coli MS 69-1]
gi|301027081|ref|ZP_07190453.1| protein TolQ [Escherichia coli MS 196-1]
gi|301305225|ref|ZP_07211323.1| protein TolQ [Escherichia coli MS 124-1]
gi|301327930|ref|ZP_07221101.1| protein TolQ [Escherichia coli MS 78-1]
gi|301648042|ref|ZP_07247809.1| protein TolQ [Escherichia coli MS 146-1]
gi|307137350|ref|ZP_07496706.1| colicin uptake protein TolQ [Escherichia coli H736]
gi|307314798|ref|ZP_07594392.1| protein TolQ [Escherichia coli W]
gi|309797452|ref|ZP_07691844.1| protein TolQ [Escherichia coli MS 145-7]
gi|331641238|ref|ZP_08342373.1| protein TolQ [Escherichia coli H736]
gi|331651745|ref|ZP_08352764.1| protein TolQ [Escherichia coli M718]
gi|331662097|ref|ZP_08363020.1| protein TolQ [Escherichia coli TA143]
gi|331667104|ref|ZP_08367969.1| protein TolQ [Escherichia coli TA271]
gi|331672259|ref|ZP_08373050.1| protein TolQ [Escherichia coli TA280]
gi|331676419|ref|ZP_08377116.1| protein TolQ [Escherichia coli H591]
gi|332282414|ref|ZP_08394827.1| membrane-spanning inner membrane protein [Shigella sp. D9]
gi|78103355|sp|P0ABV0|TOLQ_ECO57 RecName: Full=Protein tolQ
gi|78103356|sp|P0ABU9|TOLQ_ECOLI RecName: Full=Protein tolQ
gi|78103357|sp|P0ABV1|TOLQ_SHIFL RecName: Full=Protein tolQ
gi|12513670|gb|AAG55073.1|AE005252_9 inner membrane protein, membrane-spanning, maintains integrity of
cell envelope; tolerance to group A colicins
[Escherichia coli O157:H7 str. EDL933]
gi|1128978|gb|AAA83919.1| ORF 2; putative [Escherichia coli]
gi|1651329|dbj|BAA35403.1| membrane spanning protein in TolA-TolQ-TolR complex [Escherichia
coli str. K12 substr. W3110]
gi|1786958|gb|AAC73831.1| membrane spanning protein in TolA-TolQ-TolR complex [Escherichia
coli str. K-12 substr. MG1655]
gi|13360231|dbj|BAB34195.1| inner membrane protein TolQ [Escherichia coli O157:H7 str. Sakai]
gi|24050800|gb|AAN42204.1| inner membrane protein TolQ [Shigella flexneri 2a str. 301]
gi|30040344|gb|AAP16077.1| inner membrane protein TolQ [Shigella flexneri 2a str. 2457T]
gi|73854738|gb|AAZ87445.1| membrane-spanning inner membrane protein [Shigella sonnei Ss046]
gi|81244575|gb|ABB65283.1| TolQ [Shigella boydii Sb227]
gi|157065900|gb|ABV05155.1| protein TolQ [Escherichia coli HS]
gi|157078560|gb|ABV18268.1| protein TolQ [Escherichia coli E24377A]
gi|169888239|gb|ACB01946.1| membrane spanning protein in TolA-TolQ-TolR complex [Escherichia
coli str. K-12 substr. DH10B]
gi|170518746|gb|ACB16924.1| protein TolQ [Escherichia coli SMS-3-5]
gi|187430288|gb|ACD09562.1| protein TolQ [Shigella boydii CDC 3083-94]
gi|188013541|gb|EDU51663.1| protein TolQ [Escherichia coli O157:H7 str. EC4113]
gi|188487794|gb|EDU62897.1| protein TolQ [Escherichia coli 53638]
gi|189002913|gb|EDU71899.1| protein TolQ [Escherichia coli O157:H7 str. EC4076]
gi|189355762|gb|EDU74181.1| protein TolQ [Escherichia coli O157:H7 str. EC4401]
gi|189363406|gb|EDU81825.1| protein TolQ [Escherichia coli O157:H7 str. EC4486]
gi|189364863|gb|EDU83279.1| protein TolQ [Escherichia coli O157:H7 str. EC4501]
gi|189373046|gb|EDU91462.1| protein TolQ [Escherichia coli O157:H7 str. EC869]
gi|190900178|gb|EDV60084.1| protein TolQ [Escherichia coli B7A]
gi|194412872|gb|EDX29163.1| protein TolQ [Escherichia coli B171]
gi|194421817|gb|EDX37824.1| protein TolQ [Escherichia coli 101-1]
gi|208725703|gb|EDZ75304.1| protein TolQ [Escherichia coli O157:H7 str. EC4206]
gi|208732102|gb|EDZ80790.1| protein TolQ [Escherichia coli O157:H7 str. EC4045]
gi|208737477|gb|EDZ85161.1| protein TolQ [Escherichia coli O157:H7 str. EC4042]
gi|209160257|gb|ACI37690.1| protein TolQ [Escherichia coli O157:H7 str. EC4115]
gi|209776408|gb|ACI86516.1| inner membrane protein TolQ [Escherichia coli]
gi|209776410|gb|ACI86517.1| inner membrane protein TolQ [Escherichia coli]
gi|209776412|gb|ACI86518.1| inner membrane protein TolQ [Escherichia coli]
gi|209776414|gb|ACI86519.1| inner membrane protein TolQ [Escherichia coli]
gi|209776416|gb|ACI86520.1| inner membrane protein TolQ [Escherichia coli]
gi|209911247|dbj|BAG76321.1| TolQ protein [Escherichia coli SE11]
gi|217322248|gb|EEC30672.1| protein TolQ [Escherichia coli O157:H7 str. TW14588]
gi|218350893|emb|CAU96591.1| membrane spanning protein in TolA-TolQ-TolR complex [Escherichia
coli 55989]
gi|218360032|emb|CAQ97579.1| membrane spanning protein in TolA-TolQ-TolR complex [Escherichia
coli IAI1]
gi|218369095|emb|CAR16849.1| membrane spanning protein in TolA-TolQ-TolR complex [Escherichia
coli IAI39]
gi|218431161|emb|CAR12037.1| membrane spanning protein in TolA-TolQ-TolR complex [Escherichia
coli UMN026]
gi|238861744|gb|ACR63742.1| membrane spanning protein in TolA-TolQ-TolR complex [Escherichia
coli BW2952]
gi|242376499|emb|CAQ31203.1| tolQ, subunit of The Tol-Pal Cell Envelope Complex, Colicin S4
Transport System and The Colicin A Import System
[Escherichia coli BL21(DE3)]
gi|253325336|gb|ACT29938.1| protein TolQ [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
gi|253972708|gb|ACT38379.1| membrane spanning protein in TolA-TolQ-TolR complex [Escherichia
coli B str. REL606]
gi|253976902|gb|ACT42572.1| membrane spanning protein in TolA-TolQ-TolR complex [Escherichia
coli BL21(DE3)]
gi|254591294|gb|ACT70655.1| membrane spanning protein in TolA-TolQ-TolR complex [Escherichia
coli O157:H7 str. TW14359]
gi|257752621|dbj|BAI24123.1| membrane spanning protein TolQ [Escherichia coli O26:H11 str.
11368]
gi|257758090|dbj|BAI29587.1| membrane spanning protein TolQ [Escherichia coli O103:H2 str.
12009]
gi|257763224|dbj|BAI34719.1| membrane spanning protein TolQ [Escherichia coli O111:H- str.
11128]
gi|260450109|gb|ACX40531.1| protein TolQ [Escherichia coli DH1]
gi|281599947|gb|ADA72931.1| Inner membrane protein [Shigella flexneri 2002017]
gi|284920524|emb|CBG33586.1| colicin import protein [Escherichia coli 042]
gi|290761553|gb|ADD55514.1| Inner membrane protein [Escherichia coli O55:H7 str. CB9615]
gi|299879415|gb|EFI87626.1| protein TolQ [Escherichia coli MS 196-1]
gi|300315604|gb|EFJ65388.1| protein TolQ [Escherichia coli MS 175-1]
gi|300355803|gb|EFJ71673.1| protein TolQ [Escherichia coli MS 198-1]
gi|300398437|gb|EFJ81975.1| protein TolQ [Escherichia coli MS 69-1]
gi|300401217|gb|EFJ84755.1| protein TolQ [Escherichia coli MS 84-1]
gi|300414461|gb|EFJ97771.1| protein TolQ [Escherichia coli MS 115-1]
gi|300417840|gb|EFK01151.1| protein TolQ [Escherichia coli MS 182-1]
gi|300453168|gb|EFK16788.1| protein TolQ [Escherichia coli MS 116-1]
gi|300457157|gb|EFK20650.1| protein TolQ [Escherichia coli MS 21-1]
gi|300462566|gb|EFK26059.1| protein TolQ [Escherichia coli MS 187-1]
gi|300524515|gb|EFK45584.1| protein TolQ [Escherichia coli MS 119-7]
gi|300531076|gb|EFK52138.1| protein TolQ [Escherichia coli MS 107-1]
gi|300839537|gb|EFK67297.1| protein TolQ [Escherichia coli MS 124-1]
gi|300845573|gb|EFK73333.1| protein TolQ [Escherichia coli MS 78-1]
gi|301073868|gb|EFK88674.1| protein TolQ [Escherichia coli MS 146-1]
gi|306905696|gb|EFN36224.1| protein TolQ [Escherichia coli W]
gi|308118976|gb|EFO56238.1| protein TolQ [Escherichia coli MS 145-7]
gi|309700959|emb|CBJ00256.1| colicin import protein [Escherichia coli ETEC H10407]
gi|315059980|gb|ADT74307.1| membrane spanning protein in TolA-TolQ-TolR complex [Escherichia
coli W]
gi|315257656|gb|EFU37624.1| protein TolQ [Escherichia coli MS 85-1]
gi|320193142|gb|EFW67782.1| MotA/TolQ/ExbB proton channel family protein [Escherichia coli
O157:H7 str. EC1212]
gi|320637995|gb|EFX07764.1| colicin uptake protein TolQ [Escherichia coli O157:H7 str. G5101]
gi|320643390|gb|EFX12570.1| colicin uptake protein TolQ [Escherichia coli O157:H- str. 493-89]
gi|320648739|gb|EFX17372.1| colicin uptake protein TolQ [Escherichia coli O157:H- str. H 2687]
gi|320654323|gb|EFX22376.1| colicin uptake protein TolQ [Escherichia coli O55:H7 str. 3256-97
TW 07815]
gi|320659955|gb|EFX27497.1| colicin uptake protein TolQ [Escherichia coli O55:H7 str. USDA
5905]
gi|320664780|gb|EFX31918.1| colicin uptake protein TolQ [Escherichia coli O157:H7 str. LSU-61]
gi|323379460|gb|ADX51728.1| protein TolQ [Escherichia coli KO11]
gi|323942960|gb|EGB39124.1| TolQ protein [Escherichia coli E482]
gi|323963118|gb|EGB58688.1| TolQ protein [Escherichia coli H489]
gi|323967340|gb|EGB62761.1| TolQ protein [Escherichia coli M863]
gi|324020355|gb|EGB89574.1| protein TolQ [Escherichia coli MS 117-3]
gi|324116279|gb|EGC10200.1| TolQ protein [Escherichia coli E1167]
gi|326341514|gb|EGD65304.1| MotA/TolQ/ExbB proton channel family protein [Escherichia coli
O157:H7 str. 1044]
gi|331038036|gb|EGI10256.1| protein TolQ [Escherichia coli H736]
gi|331050023|gb|EGI22081.1| protein TolQ [Escherichia coli M718]
gi|331060519|gb|EGI32483.1| protein TolQ [Escherichia coli TA143]
gi|331065460|gb|EGI37353.1| protein TolQ [Escherichia coli TA271]
gi|331070454|gb|EGI41818.1| protein TolQ [Escherichia coli TA280]
gi|331075912|gb|EGI47209.1| protein TolQ [Escherichia coli H591]
gi|332096457|gb|EGJ01453.1| protein TolQ [Shigella dysenteriae 155-74]
gi|332104766|gb|EGJ08112.1| membrane-spanning inner membrane protein [Shigella sp. D9]
Length = 230
Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats.
Identities = 69/221 (31%), Positives = 116/221 (52%), Gaps = 3/221 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
+ D++I LF++ L VK I+ +L FSI SW++IIQ++ R+ FE FWSG
Sbjct: 1 MTDMNILDLFLKASLLVKLIMLILIGFSIASWAIIIQRTRILNAAAREAEAFEDKFWSGI 60
Query: 68 SLETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
L + + + + G IF S E+ + + +P + + R M +++ REL
Sbjct: 61 ELSRLYQESQGKRDNLTGSEQIFYSGFKEFVRLHRANSHAPEAVVEGASRAMRISMNREL 120
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILL 184
E + + FLG++ S +G+ G V G+M F ++ + + PGI E+LI+ +
Sbjct: 121 ENLETHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMVAPGIAEALIATAI 180
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
GL +IP+ +AYN+ + K + + F EF+AIL RQ
Sbjct: 181 GLFAAIPAVMAYNRLNQRVNKLELNYDNFMEEFTAILHRQA 221
>gi|26246706|ref|NP_752746.1| colicin uptake protein TolQ [Escherichia coli CFT073]
gi|91209771|ref|YP_539757.1| colicin uptake protein TolQ [Escherichia coli UTI89]
gi|117622928|ref|YP_851841.1| colicin uptake protein TolQ [Escherichia coli APEC O1]
gi|191174066|ref|ZP_03035582.1| protein TolQ [Escherichia coli F11]
gi|215485759|ref|YP_002328190.1| colicin uptake protein TolQ [Escherichia coli O127:H6 str.
E2348/69]
gi|218557650|ref|YP_002390563.1| colicin uptake protein TolQ [Escherichia coli S88]
gi|218688528|ref|YP_002396740.1| colicin uptake protein TolQ [Escherichia coli ED1a]
gi|227884296|ref|ZP_04002101.1| colicin uptake protein TolQ [Escherichia coli 83972]
gi|237707300|ref|ZP_04537781.1| colicin uptake protein TolQ [Escherichia sp. 3_2_53FAA]
gi|300992348|ref|ZP_07179871.1| protein TolQ [Escherichia coli MS 200-1]
gi|300993163|ref|ZP_07180246.1| protein TolQ [Escherichia coli MS 45-1]
gi|301051343|ref|ZP_07198166.1| protein TolQ [Escherichia coli MS 185-1]
gi|306812856|ref|ZP_07447049.1| colicin uptake protein TolQ [Escherichia coli NC101]
gi|331645888|ref|ZP_08346991.1| protein TolQ [Escherichia coli M605]
gi|331656755|ref|ZP_08357717.1| protein TolQ [Escherichia coli TA206]
gi|331682167|ref|ZP_08382789.1| protein TolQ [Escherichia coli H299]
gi|26107105|gb|AAN79289.1|AE016757_193 TolQ protein [Escherichia coli CFT073]
gi|91071345|gb|ABE06226.1| TolQ protein [Escherichia coli UTI89]
gi|115512052|gb|ABJ00127.1| TolQ protein [Escherichia coli APEC O1]
gi|190905674|gb|EDV65297.1| protein TolQ [Escherichia coli F11]
gi|215263831|emb|CAS08169.1| membrane spanning protein TolQ in TolA-TolQ-TolR complex
[Escherichia coli O127:H6 str. E2348/69]
gi|218364419|emb|CAR02099.1| membrane spanning protein in TolA-TolQ-TolR complex [Escherichia
coli S88]
gi|218426092|emb|CAR06910.1| membrane spanning protein in TolA-TolQ-TolR complex [Escherichia
coli ED1a]
gi|222032473|emb|CAP75212.1| Protein tolQ [Escherichia coli LF82]
gi|226898510|gb|EEH84769.1| colicin uptake protein TolQ [Escherichia sp. 3_2_53FAA]
gi|227839048|gb|EEJ49514.1| colicin uptake protein TolQ [Escherichia coli 83972]
gi|281177880|dbj|BAI54210.1| TolQ protein [Escherichia coli SE15]
gi|294489766|gb|ADE88522.1| protein TolQ [Escherichia coli IHE3034]
gi|300297005|gb|EFJ53390.1| protein TolQ [Escherichia coli MS 185-1]
gi|300305365|gb|EFJ59885.1| protein TolQ [Escherichia coli MS 200-1]
gi|300406693|gb|EFJ90231.1| protein TolQ [Escherichia coli MS 45-1]
gi|305853619|gb|EFM54058.1| colicin uptake protein TolQ [Escherichia coli NC101]
gi|312945261|gb|ADR26088.1| colicin uptake protein TolQ [Escherichia coli O83:H1 str. NRG 857C]
gi|315287148|gb|EFU46560.1| protein TolQ [Escherichia coli MS 110-3]
gi|315292651|gb|EFU52003.1| protein TolQ [Escherichia coli MS 153-1]
gi|315299260|gb|EFU58512.1| protein TolQ [Escherichia coli MS 16-3]
gi|323953137|gb|EGB49004.1| TolQ protein [Escherichia coli H252]
gi|323958481|gb|EGB54187.1| TolQ protein [Escherichia coli H263]
gi|324009569|gb|EGB78788.1| protein TolQ [Escherichia coli MS 57-2]
gi|324010460|gb|EGB79679.1| protein TolQ [Escherichia coli MS 60-1]
gi|331044640|gb|EGI16767.1| protein TolQ [Escherichia coli M605]
gi|331055003|gb|EGI27012.1| protein TolQ [Escherichia coli TA206]
gi|331080591|gb|EGI51767.1| protein TolQ [Escherichia coli H299]
Length = 230
Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats.
Identities = 69/221 (31%), Positives = 116/221 (52%), Gaps = 3/221 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
+ D++I LF++ L VK I+ +L FSI SW++IIQ++ R+ FE FWSG
Sbjct: 1 MTDMNILDLFLKASLLVKLIMLILIGFSIASWAIIIQRTRILNAAAREAEAFEDKFWSGI 60
Query: 68 SLETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
L + + + + G IF S E+ + + +P + + R M +++ REL
Sbjct: 61 ELSRLYQESQGKRDNLSGSEQIFYSGFKEFVRLHRANSHAPEAVVEGASRAMRISMNREL 120
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILL 184
E + + FLG++ S +G+ G V G+M F ++ + + PGI E+LI+ +
Sbjct: 121 ENLETHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMVAPGIAEALIATAI 180
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
GL +IP+ +AYN+ + K + + F EF+AIL RQ
Sbjct: 181 GLFAAIPAVMAYNRLNQRVNKLELNYDNFMEEFTAILHRQA 221
>gi|126728383|ref|ZP_01744199.1| proton transporter TolQ [Sagittula stellata E-37]
gi|126711348|gb|EBA10398.1| proton transporter TolQ [Sagittula stellata E-37]
Length = 231
Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats.
Identities = 82/219 (37%), Positives = 126/219 (57%), Gaps = 1/219 (0%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
+D S +ALF + L VK ++ +L SI SW++II+K V++ RR+ F+++FWSG+
Sbjct: 12 IDFSFWALFARATLTVKLVMIMLIAASIWSWAIIIEKFVSYRKARREASRFDRMFWSGEP 71
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
L+ + L +F + M EW++S + Q RIDR MDVAI +E +E+
Sbjct: 72 LDELFDQLGPEPKGRSERVFAAGMIEWRRSHREDGALIANAQSRIDRSMDVAIQKEADEL 131
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLC 187
L L ++ S +G+ G V G+M F IA + ++V + PGI E+L++ LGL
Sbjct: 132 QRGLPVLATVGSTSPFIGLFGTVFGIMHAFVQIAETQNTSLVVVAPGIAEALLATGLGLL 191
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ I YNKF D+ + E FA+EFS ILSRQ +
Sbjct: 192 AAIPAVIFYNKFSADADRIVGNYEAFADEFSTILSRQLD 230
>gi|120610901|ref|YP_970579.1| MotA/TolQ/ExbB proton channel [Acidovorax citrulli AAC00-1]
gi|326317712|ref|YP_004235384.1| protein TolQ [Acidovorax avenae subsp. avenae ATCC 19860]
gi|120589365|gb|ABM32805.1| Cell division and transport-associated protein TolQ [Acidovorax
citrulli AAC00-1]
gi|323374548|gb|ADX46817.1| protein TolQ [Acidovorax avenae subsp. avenae ATCC 19860]
Length = 233
Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats.
Identities = 75/228 (32%), Positives = 114/228 (50%), Gaps = 3/228 (1%)
Query: 6 LAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS 65
+ D+SI L + V+ ++ LL SI SW+ I +K +R EFE+ FWS
Sbjct: 1 MNSQDMSILHLVLNASWVVQLVMALLIGVSIASWAAIFRKLFALKRVRSLNDEFEREFWS 60
Query: 66 GQSLETVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAR 123
G SL + S + + IF S M E+ K ++ P + D R M + R
Sbjct: 61 GTSLNDLYASAAQNAKNAGPMERIFASGMREFHKLRERRITDPGTLLDGARRAMRASFQR 120
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISI 182
E++ + LSFLGS++S VG+ G V G+M F AG + ++ PGI E+L++
Sbjct: 121 EMDVVESSLSFLGSVASVSPYVGLFGTVWGIMHAFTGFAGMEQVTLATVAPGIAEALVAT 180
Query: 183 LLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
+GL +IP+ +AYN+F D + A+ E F EFS IL R +
Sbjct: 181 AIGLFAAIPAVVAYNRFARDIDRVAIHQETFIEEFSNILQRNLGAAPA 228
>gi|163733518|ref|ZP_02140961.1| putative proton transporter TolQ [Roseobacter litoralis Och 149]
gi|161393306|gb|EDQ17632.1| putative proton transporter TolQ [Roseobacter litoralis Och 149]
Length = 231
Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats.
Identities = 81/230 (35%), Positives = 128/230 (55%), Gaps = 4/230 (1%)
Query: 1 MNNYGLAI---MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFR 57
M LA+ +D S F LF + + VK ++ +L + S +WSVI+ K + + R +
Sbjct: 1 MEAETLAMAHEIDFSFFGLFARATIVVKLVMIMLIVASFWAWSVIVIKLILYRKTRHEAA 60
Query: 58 EFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMM 117
F++ FWSG+ L+ + + + + G IF + M EW++S G RIDR M
Sbjct: 61 VFDRAFWSGEPLDGLFEEVGPAPSGGTEKIFAAGMMEWQRSHHDDGGLIAGATQRIDRSM 120
Query: 118 DVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGII 176
DVAI +E E + + L+ L ++ S+ +G+ G V+G+M F IA + N+ V PGI
Sbjct: 121 DVAINKESEHLRDGLTVLATIGSSTPFIGLFGTVIGIMNAFIEIAEQQNTNLAVVAPGIA 180
Query: 177 ESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
E+L++ LGL +IP+ I YNK D+ + E FA+EF+ ILSRQ +
Sbjct: 181 EALLATGLGLFAAIPAVIYYNKLSADADRILAGYESFADEFATILSRQLD 230
>gi|134280048|ref|ZP_01766759.1| protein TolQ [Burkholderia pseudomallei 305]
gi|217421193|ref|ZP_03452698.1| protein TolQ [Burkholderia pseudomallei 576]
gi|134248055|gb|EBA48138.1| protein TolQ [Burkholderia pseudomallei 305]
gi|217396605|gb|EEC36622.1| protein TolQ [Burkholderia pseudomallei 576]
Length = 225
Score = 229 bits (584), Expect = 3e-58, Method: Composition-based stats.
Identities = 72/221 (32%), Positives = 117/221 (52%), Gaps = 3/221 (1%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
D+SI +L + + + ++ LL S++SW+ I +K R Q FE+ FWSG
Sbjct: 5 QDLSIISLVLNASVLAQAVMGLLLALSLMSWTFIFRKWFAIRRARAQTERFERDFWSGGD 64
Query: 69 LETVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
L+ + +S N+ + L IF S M E+ K+ +K P + D R M + RE++
Sbjct: 65 LQALYQSAANNRHTIGALERIFESGMREFLKAKEKRLSDPALLLDGARRAMRASFQREMD 124
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV-SIPGIIESLISILLG 185
+ LSFL S+ S +G+ G V G+M F+ +A + PGI E+L++ +G
Sbjct: 125 VLESNLSFLASVGSVSPYIGLFGTVWGIMNSFRGLANVQQATLANVAPGIAEALVATAIG 184
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
L +IP+ +AYN++ D + A++ E F EFS IL RQ +
Sbjct: 185 LFAAIPAVVAYNRYAHDIDRLAIRFETFIEEFSNILQRQAQ 225
>gi|82776015|ref|YP_402362.1| colicin uptake protein TolQ [Shigella dysenteriae Sd197]
gi|81240163|gb|ABB60873.1| inner membrane protein [Shigella dysenteriae Sd197]
Length = 230
Score = 229 bits (584), Expect = 3e-58, Method: Composition-based stats.
Identities = 70/221 (31%), Positives = 116/221 (52%), Gaps = 3/221 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
+ D++I LF++ L VK I+ +L FSI SW+VIIQ++ R+ FE FWSG
Sbjct: 1 MTDMNILDLFLKASLLVKLIMLILIGFSIASWAVIIQRTRILNAAAREAEAFEDKFWSGI 60
Query: 68 SLETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
L + + + + G IF S E+ + + +P + + R M +++ REL
Sbjct: 61 ELSRLYQESQGKRDNLTGSEQIFYSGFKEFVRLHRANSHAPEAVVEGASRAMRISMNREL 120
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILL 184
E + + FLG++ S +G+ G V G+M F ++ + + PGI E+LI+ +
Sbjct: 121 ENLETHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMVAPGIAEALIATAI 180
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
GL +IP+ +AYN+ + K + + F EF+AIL RQ
Sbjct: 181 GLFAAIPAVMAYNRLNQRVNKLELNYDNFMEEFTAILHRQA 221
>gi|88861317|ref|ZP_01135948.1| inner membrane protein [Pseudoalteromonas tunicata D2]
gi|88816696|gb|EAR26520.1| inner membrane protein [Pseudoalteromonas tunicata D2]
Length = 230
Score = 229 bits (584), Expect = 3e-58, Method: Composition-based stats.
Identities = 66/224 (29%), Positives = 110/224 (49%), Gaps = 3/224 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
++S L ++ V+ ++ +L S++SW++I Q+ + Q ++FE FWSG
Sbjct: 2 TTELSFIDLILKASFLVQLVMLMLVGLSVISWTMIFQRQKALHNAQIQAKKFEDKFWSGT 61
Query: 68 SLETVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
L + L GL ++F + E+ + + I D R M VA++RE+
Sbjct: 62 DLSKIYTELSARQQGLDGLESLFTAGFKEFARLSKSNLTAAGTIMDGTHRAMRVALSREM 121
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILL 184
E++ LSFL ++ S +G+ G V G+M F ++ + + PGI E+LI+ +
Sbjct: 122 EKLESSLSFLATVGSISPYIGLFGTVWGIMNAFIALGQVKQATLQMVAPGIAEALIATAM 181
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
GL +IP+ IAYN+F +K F EFS IL RQ
Sbjct: 182 GLFAAIPAVIAYNRFAHKVEKIESSYGNFMEEFSNILHRQAVAQ 225
>gi|192362359|ref|YP_001981528.1| tolQ protein [Cellvibrio japonicus Ueda107]
gi|190688524|gb|ACE86202.1| tolQ protein [Cellvibrio japonicus Ueda107]
Length = 228
Score = 228 bits (583), Expect = 3e-58, Method: Composition-based stats.
Identities = 71/221 (32%), Positives = 115/221 (52%), Gaps = 3/221 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+SI L +Q V+ ++ +L + S++SW++I Q+ F FE+ FWSG L
Sbjct: 8 LSITHLILQASFLVQLVMLILVLASVISWAMIFQRERYQRKASSAFSYFEKQFWSGIDLN 67
Query: 71 TVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ + ++ G+ IF + E+ + I + R M VA+ARE E++
Sbjct: 68 QLYRQGNGRTDLAEGIENIFRAGFKEFTRLRQTAGADSDAIMEGSMRAMRVALAREQEKL 127
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLC 187
E L FL S++S +G+ G V G+M F +IA ++ ++ PGI E+LI+ +GL
Sbjct: 128 EENLPFLASVASVSPYIGLFGTVWGIMVSFLNIANAGQPSLATVAPGIAEALIATAMGLF 187
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
+IP+ +AYNKF ++ + FA EFSAIL RQ
Sbjct: 188 AAIPAVLAYNKFSARAESLLSNYQTFAEEFSAILHRQVHSK 228
>gi|161504093|ref|YP_001571205.1| colicin uptake protein TolQ [Salmonella enterica subsp. arizonae
serovar 62:z4,z23:-- str. RSK2980]
gi|160865440|gb|ABX22063.1| hypothetical protein SARI_02191 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 230
Score = 228 bits (583), Expect = 3e-58, Method: Composition-based stats.
Identities = 69/221 (31%), Positives = 116/221 (52%), Gaps = 3/221 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
+ D++I LF++ L VK I+ +L FSI SW++IIQ++ R+ FE FWSG
Sbjct: 1 MTDMNILDLFLKASLLVKLIMLILIGFSIASWAIIIQRTRILNAAAREAEAFEDKFWSGI 60
Query: 68 SLETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
L + + + + G IF S E+ + + +P + + R M +++ REL
Sbjct: 61 ELSRLYQESQGRRDNLSGSEQIFYSGFKEFVRLHRANSHAPEAVVEGASRAMRISMNREL 120
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILL 184
E + + FLG++ S +G+ G V G+M F ++ + + PGI E+LI+ +
Sbjct: 121 ETLETHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMVAPGIAEALIATAI 180
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
GL +IP+ +AYN+ + K + + F EF+AIL RQ
Sbjct: 181 GLFAAIPAVMAYNRLNQRVNKLELNYDNFMEEFTAILHRQA 221
>gi|78485240|ref|YP_391165.1| MotA/TolQ/ExbB proton channel [Thiomicrospira crunogena XCL-2]
gi|78363526|gb|ABB41491.1| TolQ protein [Thiomicrospira crunogena XCL-2]
Length = 229
Score = 228 bits (583), Expect = 4e-58, Method: Composition-based stats.
Identities = 64/228 (28%), Positives = 115/228 (50%), Gaps = 9/228 (3%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
MNN+ S+ L + V+ ++ +L + SI++W++ KS +R+ R+F+
Sbjct: 1 MNNH-------SLMELILDASPVVQAVMVILLLMSIMAWAITFAKSYQLRKAQREARDFD 53
Query: 61 QLFWSGQSLETVCKSL-KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDV 119
+LFWS L + + ++ N G A IF + E+ +G + + R M V
Sbjct: 54 ELFWSTPELTGLYNQVTRDEDNTGNAQIFEAGFKEFMSLKSQGVIDSADLINGTQRAMRV 113
Query: 120 AIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV-SIPGIIES 178
A ++++E + + L ++ S+ +G+ G V G+M F S+ + + PGI E+
Sbjct: 114 AFSKQIERLENQTPLLATVGSSAPYIGLFGTVWGVMHAFSSLGDIQNATLASVAPGISEA 173
Query: 179 LISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
LI+ +GL +IP+ IAYN+ ++ K Q E FA F I+ RQ+
Sbjct: 174 LIATAMGLFAAIPAVIAYNRLSVNTDKVIGQYENFAEGFLTIIQRQSH 221
>gi|283784490|ref|YP_003364355.1| colicin import protein [Citrobacter rodentium ICC168]
gi|282947944|emb|CBG87508.1| colicin import protein [Citrobacter rodentium ICC168]
Length = 230
Score = 228 bits (583), Expect = 4e-58, Method: Composition-based stats.
Identities = 70/221 (31%), Positives = 116/221 (52%), Gaps = 3/221 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
+ D++I LF++ L VK I+ +L FSI SW++IIQ++ R+ FE FWSG
Sbjct: 1 MTDMNILDLFLKASLLVKLIMLILIGFSIASWAIIIQRTRILNAAAREAEAFEDKFWSGI 60
Query: 68 SLETVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
L + + + + G IF S E+ + + +P I + R M +++ REL
Sbjct: 61 ELSRLYQESQGRRDSLAGTEQIFYSGFKEFARLHRANSHAPEAIVEGASRAMRISMNREL 120
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILL 184
E + + FLG++ S +G+ G V G+M F ++ + + PGI E+LI+ +
Sbjct: 121 ENLETHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMVAPGIAEALIATAI 180
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
GL +IP+ +AYN+ + K + + F EF+AIL RQ
Sbjct: 181 GLFAAIPAVMAYNRLNQRVNKLELNYDNFMEEFTAILHRQA 221
>gi|59711565|ref|YP_204341.1| membrane spanning protein in TolA-TolQ-TolR complex [Vibrio
fischeri ES114]
gi|197334878|ref|YP_002155720.1| protein TolQ [Vibrio fischeri MJ11]
gi|59479666|gb|AAW85453.1| membrane spanning protein in TolA-TolQ-TolR complex [Vibrio
fischeri ES114]
gi|197316368|gb|ACH65815.1| protein TolQ [Vibrio fischeri MJ11]
Length = 228
Score = 228 bits (583), Expect = 4e-58, Method: Composition-based stats.
Identities = 67/219 (30%), Positives = 110/219 (50%), Gaps = 3/219 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
++SI LF+Q L VK ++ +L S++SW++I ++S R FE FWSG L
Sbjct: 4 ELSILDLFLQASLLVKIVMLILLSLSVISWAMIFKRSKVLSVARSDAERFEDKFWSGMDL 63
Query: 70 ETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ +K + G IF S +E+ + + S + D R M V ++RE++
Sbjct: 64 SQLFNEVKVRKDRISGTEKIFYSGFNEFARLSRVNSSSSEAVMDGTARAMRVTVSREVDN 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ L FL ++ S +G+ G V G+M F ++ + + PGI E+L++ +GL
Sbjct: 124 LETNLPFLATVGSITPYIGLFGTVWGIMHAFIALGAVKQATLAMVAPGIAEALVATAMGL 183
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ IAYN+ K F +EFS+IL RQ
Sbjct: 184 FAAIPAVIAYNRLSVKVGKLEHNYAAFMDEFSSILHRQA 222
>gi|71279709|ref|YP_268466.1| tolQ protein [Colwellia psychrerythraea 34H]
gi|71145449|gb|AAZ25922.1| tolQ protein [Colwellia psychrerythraea 34H]
Length = 228
Score = 228 bits (582), Expect = 4e-58, Method: Composition-based stats.
Identities = 68/223 (30%), Positives = 117/223 (52%), Gaps = 2/223 (0%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
+ISIF LF++ + V+ ++ +L FSI+ W++I Q+ T + + FE FWSG L
Sbjct: 4 EISIFHLFLEASILVQFVMLVLLTFSIVCWAMIFQRRKILRTAAAELKAFEDKFWSGADL 63
Query: 70 ETVCKSLKNHHNI-GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ I G+ ++F++ E+ + +P I D R M VA++RE++ +
Sbjct: 64 SKLYSETSAKSQIQGIESLFIAGFKEFARLRKSHIDNPQIIVDGTHRAMRVALSREVDSL 123
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLC 187
L F+ ++ S +G+ G V G+M F ++ + + PGI E+LI+ +GL
Sbjct: 124 ETHLPFMATVGSISPYIGLFGTVWGIMNSFIALGAVKQATLAMVAPGIAEALIATAMGLF 183
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
+IP+ IA+N+F +K F +EFS+IL RQ+ S
Sbjct: 184 AAIPAVIAFNRFSHKVEKLENSYGNFMDEFSSILQRQSAAEQS 226
>gi|255263319|ref|ZP_05342661.1| protein TolQ [Thalassiobium sp. R2A62]
gi|255105654|gb|EET48328.1| protein TolQ [Thalassiobium sp. R2A62]
Length = 223
Score = 228 bits (582), Expect = 4e-58, Method: Composition-based stats.
Identities = 82/222 (36%), Positives = 128/222 (57%), Gaps = 1/222 (0%)
Query: 6 LAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS 65
+ +D S++ALF + + VK ++ +L I S+ W VI+ K + + R++ F++ FWS
Sbjct: 1 MEAVDFSMWALFARATITVKLVMIMLIIASVWCWGVIVDKLIQYRNARKEAGIFDRAFWS 60
Query: 66 GQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
G+ L+ + + + + IF + M EW++S + G Q RIDR MDVAIARE
Sbjct: 61 GEPLDGLFEKIGAEPDGPSEKIFAAGMMEWRRSHRQDGGLIAGAQARIDRAMDVAIARES 120
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILL 184
E++ + L L ++ S VG+ G V G+M F IA ++ N+ V PGI E+L++ L
Sbjct: 121 EKLQKGLPVLATVGSTAPFVGLFGTVWGIMNAFIEIAEQHNTNLAVVAPGIAEALLATGL 180
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
GL +IP+ I YNK DS + E FA+EF+ ILSRQ +
Sbjct: 181 GLLAAIPAVIYYNKLSADSDRIVGGYEAFADEFATILSRQLD 222
>gi|311280383|ref|YP_003942614.1| protein TolQ [Enterobacter cloacae SCF1]
gi|308749578|gb|ADO49330.1| protein TolQ [Enterobacter cloacae SCF1]
Length = 230
Score = 228 bits (582), Expect = 4e-58, Method: Composition-based stats.
Identities = 70/221 (31%), Positives = 115/221 (52%), Gaps = 3/221 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
+ D++I LF++ L VK I+ +L FSI SW++IIQ++ R+ FE FWSG
Sbjct: 1 MTDMNILDLFLKASLLVKLIMLILIGFSIASWAIIIQRTRILNAAAREAEAFEDKFWSGI 60
Query: 68 SLETVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
L + + + G IF S E+ + + +P I + R M +++ REL
Sbjct: 61 ELSRLYQESQGRRESLNGSEQIFYSGFKEFARLHRANSHAPEAIVEGASRAMRISMNREL 120
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILL 184
E + + FLG++ S +G+ G V G+M F ++ + + PGI E+LI+ +
Sbjct: 121 ETLETHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMVAPGIAEALIATAI 180
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
GL +IP+ +AYN+ + K + + F EF+AIL RQ
Sbjct: 181 GLFAAIPAVMAYNRLNQRVNKLELNYDNFMEEFTAILHRQA 221
>gi|16759684|ref|NP_455301.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Typhi str. CT18]
gi|16764115|ref|NP_459730.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|29142543|ref|NP_805885.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|56414138|ref|YP_151213.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|62179319|ref|YP_215736.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|161615021|ref|YP_001588986.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Paratyphi B str. SPB7]
gi|194446660|ref|YP_002039986.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
gi|194448001|ref|YP_002044779.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|194472247|ref|ZP_03078231.1| protein TolQ [Salmonella enterica subsp. enterica serovar Kentucky
str. CVM29188]
gi|194737848|ref|YP_002113853.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|195874283|ref|ZP_02701529.2| protein TolQ [Salmonella enterica subsp. enterica serovar Newport
str. SL317]
gi|197251691|ref|YP_002145706.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Agona str. SL483]
gi|197264867|ref|ZP_03164941.1| protein TolQ [Salmonella enterica subsp. enterica serovar Saintpaul
str. SARA23]
gi|197301124|ref|ZP_02663953.2| protein TolQ [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
gi|197363060|ref|YP_002142697.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|198242904|ref|YP_002214715.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|200389466|ref|ZP_03216077.1| protein TolQ [Salmonella enterica subsp. enterica serovar Virchow
str. SL491]
gi|204929841|ref|ZP_03220862.1| protein TolQ [Salmonella enterica subsp. enterica serovar Javiana
str. GA_MM04042433]
gi|205352009|ref|YP_002225810.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|205357295|ref|ZP_02346581.2| protein TolQ [Salmonella enterica subsp. enterica serovar Saintpaul
str. SARA29]
gi|205357903|ref|ZP_02574124.2| protein TolQ [Salmonella enterica subsp. enterica serovar
4,[5],12:i:- str. CVM23701]
gi|205358370|ref|ZP_02655688.2| protein TolQ [Salmonella enterica subsp. enterica serovar Kentucky
str. CDC 191]
gi|205358899|ref|ZP_02665535.2| protein TolQ [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL486]
gi|205359761|ref|ZP_02832120.2| protein TolQ [Salmonella enterica subsp. enterica serovar
Weltevreden str. HI_N05-537]
gi|205360773|ref|ZP_02686328.2| protein TolQ [Salmonella enterica subsp. enterica serovar Hadar
str. RI_05P066]
gi|207856189|ref|YP_002242840.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|25301390|pir||AE0592 TolQ protein [imported] - Salmonella enterica subsp. enterica
serovar Typhi (strain CT18)
gi|16419255|gb|AAL19689.1| tol protein, membrane-spanning inner membrane protein [Salmonella
enterica subsp. enterica serovar Typhimurium str. LT2]
gi|16501977|emb|CAD05207.1| TolQ protein [Salmonella enterica subsp. enterica serovar Typhi]
gi|29138174|gb|AAO69745.1| tolQ protein [Salmonella enterica subsp. enterica serovar Typhi
str. Ty2]
gi|56128395|gb|AAV77901.1| TolQ protein [Salmonella enterica subsp. enterica serovar Paratyphi
A str. ATCC 9150]
gi|62126952|gb|AAX64655.1| tol protein, membrane-spanning inner membrane proteins, required
for outer membrane integrity, uptake of group A
colicins, and translocation of phage DNA to cytoplasm
[Salmonella enterica subsp. enterica serovar
Choleraesuis str. SC-B67]
gi|161364385|gb|ABX68153.1| hypothetical protein SPAB_02781 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194405323|gb|ACF65545.1| protein TolQ [Salmonella enterica subsp. enterica serovar Newport
str. SL254]
gi|194406305|gb|ACF66524.1| protein TolQ [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL476]
gi|194458611|gb|EDX47450.1| protein TolQ [Salmonella enterica subsp. enterica serovar Kentucky
str. CVM29188]
gi|194713350|gb|ACF92571.1| protein TolQ [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|195629230|gb|EDX48598.1| protein TolQ [Salmonella enterica subsp. enterica serovar Newport
str. SL317]
gi|197094537|emb|CAR60057.1| TolQ protein [Salmonella enterica subsp. enterica serovar Paratyphi
A str. AKU_12601]
gi|197215394|gb|ACH52791.1| protein TolQ [Salmonella enterica subsp. enterica serovar Agona
str. SL483]
gi|197243122|gb|EDY25742.1| protein TolQ [Salmonella enterica subsp. enterica serovar Saintpaul
str. SARA23]
gi|197288339|gb|EDY27720.1| protein TolQ [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
gi|197937420|gb|ACH74753.1| protein TolQ [Salmonella enterica subsp. enterica serovar Dublin
str. CT_02021853]
gi|199601911|gb|EDZ00457.1| protein TolQ [Salmonella enterica subsp. enterica serovar Virchow
str. SL491]
gi|204320835|gb|EDZ06036.1| protein TolQ [Salmonella enterica subsp. enterica serovar Javiana
str. GA_MM04042433]
gi|205271790|emb|CAR36624.1| TolQ protein [Salmonella enterica subsp. enterica serovar
Gallinarum str. 287/91]
gi|205322565|gb|EDZ10404.1| protein TolQ [Salmonella enterica subsp. enterica serovar Saintpaul
str. SARA29]
gi|205328903|gb|EDZ15667.1| protein TolQ [Salmonella enterica subsp. enterica serovar
4,[5],12:i:- str. CVM23701]
gi|205334681|gb|EDZ21445.1| protein TolQ [Salmonella enterica subsp. enterica serovar Kentucky
str. CDC 191]
gi|205340129|gb|EDZ26893.1| protein TolQ [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL486]
gi|205343116|gb|EDZ29880.1| protein TolQ [Salmonella enterica subsp. enterica serovar
Weltevreden str. HI_N05-537]
gi|205347188|gb|EDZ33819.1| protein TolQ [Salmonella enterica subsp. enterica serovar Hadar
str. RI_05P066]
gi|206707992|emb|CAR32281.1| TolQ protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. P125109]
gi|261246008|emb|CBG23810.1| TolQ protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. D23580]
gi|267992486|gb|ACY87371.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Typhimurium str. 14028S]
gi|301157336|emb|CBW16825.1| TolQ protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. SL1344]
gi|322623637|gb|EFY20475.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-3]
gi|322670514|gb|EFY66647.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Montevideo str. 414877]
gi|322713790|gb|EFZ05361.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Choleraesuis str. A50]
gi|323129057|gb|ADX16487.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Typhimurium str. 4/74]
gi|323231002|gb|EGA15118.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Montevideo str. MB111609-0052]
gi|323260627|gb|EGA44236.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008284]
gi|323264698|gb|EGA48200.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008285]
gi|326627050|gb|EGE33393.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Gallinarum str. 9]
gi|332987682|gb|AEF06665.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Typhimurium str. UK-1]
Length = 230
Score = 228 bits (581), Expect = 5e-58, Method: Composition-based stats.
Identities = 69/221 (31%), Positives = 116/221 (52%), Gaps = 3/221 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
+ D++I LF++ L VK I+ +L FSI SW++IIQ++ R+ FE FWSG
Sbjct: 1 MTDMNILDLFLKASLLVKLIMLILIGFSIASWAIIIQRTRILNAAAREAEAFEDKFWSGI 60
Query: 68 SLETVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
L + + + + G IF S E+ + + +P + + R M +++ REL
Sbjct: 61 ELSRLYQESQGRRDSLSGSEQIFYSGFKEFVRLHRANSHAPEAVVEGASRAMRISMNREL 120
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILL 184
E + + FLG++ S +G+ G V G+M F ++ + + PGI E+LI+ +
Sbjct: 121 ETLETHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMVAPGIAEALIATAI 180
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
GL +IP+ +AYN+ + K + + F EF+AIL RQ
Sbjct: 181 GLFAAIPAVMAYNRLNQRVNKLELNYDNFMEEFTAILHRQA 221
>gi|165918701|ref|ZP_02218787.1| TolQ protein [Coxiella burnetii RSA 334]
gi|165917636|gb|EDR36240.1| TolQ protein [Coxiella burnetii RSA 334]
Length = 237
Score = 228 bits (581), Expect = 5e-58, Method: Composition-based stats.
Identities = 71/217 (32%), Positives = 116/217 (53%), Gaps = 3/217 (1%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLET 71
++++ L VK +I LLF+ SI SWS+IIQ+ RR+ ++FE LFWSG L T
Sbjct: 6 TLWSFVAHASLIVKMVIFLLFLASIASWSIIIQRVFFVKRTRREMKKFEHLFWSGVDLTT 65
Query: 72 VCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+ L + IG+++IF + +E+ + + +P I + R M +A +RE + +
Sbjct: 66 LYNQLSEKKDKLIGMSSIFYAGFNEFTRLRQELGSNPKAILEGTHRAMRIAQSREADLLE 125
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCV 188
LSFL ++ S VG+ G V G+M F+++ + + PGI E+LI+ +GL
Sbjct: 126 RNLSFLATVGSTSPYVGLFGTVWGIMTSFRALGAVQQVTIAMVAPGISEALIATAVGLFA 185
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ IAYN+F + + F E IL R+
Sbjct: 186 AIPAVIAYNRFSNELNAITQNYDTFQEEILNILHRRV 222
>gi|302879784|ref|YP_003848348.1| protein TolQ [Gallionella capsiferriformans ES-2]
gi|302582573|gb|ADL56584.1| protein TolQ [Gallionella capsiferriformans ES-2]
Length = 225
Score = 228 bits (581), Expect = 6e-58, Method: Composition-based stats.
Identities = 64/221 (28%), Positives = 105/221 (47%), Gaps = 4/221 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
D+S L + V+ ++ LL S++SW I K +R EFE+ FW
Sbjct: 4 TQDLSFIHLISNASVLVQLVMGLLLFVSMMSWWYIFMKMFAIRREKRLTAEFEETFWRNP 63
Query: 68 SLETVCKSLKNHHNI---GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARE 124
+L V K++ N L IF + E+ K + + + R M RE
Sbjct: 64 NLNEVYKTVSNTSRSDQGALERIFAAGFVEFVKLKKQHGVDAAAVMEGTRRAMRATYQRE 123
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV-SIPGIIESLISIL 183
++ + L+FL S+ S VG+ G V G+M F+ +A + PGI E+L++
Sbjct: 124 MDHLESHLAFLASVGSVSPYVGLFGTVWGIMNAFRGLANVGQATLAHVAPGIAEALVATA 183
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+GL +IP+ +AYN++ D ++ + + E F EFS +L RQ
Sbjct: 184 MGLFAAIPAVVAYNRYAHDIERLSTRFESFTEEFSNVLQRQ 224
>gi|238897407|ref|YP_002923084.1| inner membrane protein [Candidatus Hamiltonella defensa 5AT
(Acyrthosiphon pisum)]
gi|229465161|gb|ACQ66935.1| inner membrane protein [Candidatus Hamiltonella defensa 5AT
(Acyrthosiphon pisum)]
Length = 236
Score = 228 bits (581), Expect = 6e-58, Method: Composition-based stats.
Identities = 66/218 (30%), Positives = 109/218 (50%), Gaps = 3/218 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+SI LF++ VK II++L FSI SW++I++K+ + + FE FWSG L
Sbjct: 1 MSILDLFLKASFLVKGIISILICFSIFSWAIILKKTSILRSATKAANAFENRFWSGIELS 60
Query: 71 TVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ + + + G IF S E+ + R M +++ RELE +
Sbjct: 61 RLYQQSDDRRDKLSGSEQIFYSGFKEFVRLHRAHHHVCESAVKGAARAMRISMNRELEAL 120
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
+ FLG++ S +G+ G V G+M F ++ + + PGI E+LI+ +GL
Sbjct: 121 ETHVPFLGTIGSISPYIGLFGTVWGIMHSFIALGAAKQATLQMVAPGIAEALIATAIGLF 180
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ +AYN+F ++ K + F EF AIL R+
Sbjct: 181 SAIPAVMAYNRFNQNINKIEQNYDNFVEEFIAILHREV 218
>gi|134095581|ref|YP_001100656.1| inner membrane protein [Herminiimonas arsenicoxydans]
gi|133739484|emb|CAL62535.1| Protein TolQ [Herminiimonas arsenicoxydans]
Length = 230
Score = 228 bits (581), Expect = 7e-58, Method: Composition-based stats.
Identities = 75/227 (33%), Positives = 115/227 (50%), Gaps = 8/227 (3%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
D+S L + V+ ++ LL S++SW+ I +K R Q EFE+ FWSG
Sbjct: 4 TQDLSFVHLIANASVLVQLVMALLVGVSVMSWTYIFRKMFAIKNARTQTEEFERAFWSGG 63
Query: 68 SLETVCKSLKNHHN------IGLAAIFMSAMSEWKKSCDKGARSPIGIQ-DRIDRMMDVA 120
L + + ++ L IF + MSE+ KS S ++ D R M A
Sbjct: 64 DLNALYQDATSNRRKSSGSTGALERIFEAGMSEFNKSRASHDPSQASVRLDGARRAMRAA 123
Query: 121 IARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESL 179
RE++ + L+FL S+ S VG+ G V G+M F+ +A + ++ PGI E+L
Sbjct: 124 YQREMDGLESHLAFLASVGSVSPYVGLFGTVWGIMNSFRGLANVQQATLAAVAPGIAEAL 183
Query: 180 ISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
I+ +GL +IP+ +AYN++ D + AM+ E F EFS IL RQT
Sbjct: 184 IATAIGLFAAIPAVVAYNRYSHDIDRLAMRFESFVEEFSNILQRQTR 230
>gi|221134417|ref|ZP_03560722.1| tolQ protein [Glaciecola sp. HTCC2999]
Length = 222
Score = 227 bits (580), Expect = 7e-58, Method: Composition-based stats.
Identities = 73/219 (33%), Positives = 121/219 (55%), Gaps = 3/219 (1%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
D+S LF+Q L VK ++ LL SI+SW+ I+Q+S + + + +FE+ FWSG
Sbjct: 3 HDMSFIGLFLQASLVVKLVMILLMGASIVSWAFIVQRSRALNSAKNELFQFEEQFWSGTD 62
Query: 69 LETVCKSLKNHHNI-GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
L + + L + I G+ +IF++ E+ + A+ + + + R M VA++RE++E
Sbjct: 63 LNKLFQDLSSRSQITGVHSIFVAGFREFVRLRKSEAQGDV-VVEGSSRAMRVALSREVDE 121
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ KL FL ++ S +G+ G V G+M F ++ + + PGI E+LI+ +GL
Sbjct: 122 LESKLPFLATVGSISPYIGLFGTVWGIMNAFIALGQVQQATLAMVAPGIAEALIATAIGL 181
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ IAYN+F +K F EF+AIL RQ
Sbjct: 182 FAAIPAVIAYNRFSNQVEKIENGYINFMEEFAAILQRQA 220
>gi|29654865|ref|NP_820557.1| TolQ [Coxiella burnetii RSA 493]
gi|29542134|gb|AAO91071.1| TolQ [Coxiella burnetii RSA 493]
Length = 237
Score = 227 bits (580), Expect = 7e-58, Method: Composition-based stats.
Identities = 71/217 (32%), Positives = 116/217 (53%), Gaps = 3/217 (1%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLET 71
++++ L VK +I LLF+ SI SWS+IIQ+ RR+ ++FE LFWSG L T
Sbjct: 6 TLWSFVAHASLIVKMVIFLLFLASIASWSIIIQRVFFVKRTRREMKKFEHLFWSGVDLTT 65
Query: 72 VCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+ L + IG+++IF + +E+ + + +P I + R M +A +RE + +
Sbjct: 66 LYNRLSKKKDKLIGMSSIFYAGFNEFTRLRQELGSNPKAILEGTHRAMRIAQSREADLLE 125
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCV 188
LSFL ++ S VG+ G V G+M F+++ + + PGI E+LI+ +GL
Sbjct: 126 RNLSFLATVGSTSPYVGLFGTVWGIMTSFRALGAVQQVTIAMVAPGISEALIATAVGLFA 185
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ IAYN+F + + F E IL R+
Sbjct: 186 AIPAVIAYNRFSNELNAITQNYDTFQEEILNILHRRV 222
>gi|119896711|ref|YP_931924.1| translocation protein TolQ [Azoarcus sp. BH72]
gi|119669124|emb|CAL93037.1| translocation protein TolQ [Azoarcus sp. BH72]
Length = 224
Score = 227 bits (580), Expect = 7e-58, Method: Composition-based stats.
Identities = 69/221 (31%), Positives = 111/221 (50%), Gaps = 4/221 (1%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
D+SI +L Q + V+ ++ +L S++SW I +K R + EFE+ FWSG
Sbjct: 5 HDLSIISLITQASVLVQLVMAMLAGLSVMSWYWIFRKWFQIRAARSKTTEFERDFWSGGD 64
Query: 69 LETVCK--SLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
L + + S HH G+ IF S E+ K K + D R M RE++
Sbjct: 65 LNALFQSASAARHHTGGMERIFESGYREYNKLRAK-SHDHGATIDGARRAMRATFQREVD 123
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLG 185
++ L+FL S+ S +G+ G V G+M F+ ++ + + PGI E+L++ +G
Sbjct: 124 DLEAHLAFLASVGSVSPYIGLFGTVWGIMNAFRGLSNVGTATLTQVAPGIAEALVATAIG 183
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
L +IP+ +AYN+F D + ++ E F EFS IL R
Sbjct: 184 LFAAIPAVVAYNRFAHDIDRIGIRFESFMEEFSNILQRNLR 224
>gi|261343495|ref|ZP_05971140.1| protein TolQ [Providencia rustigianii DSM 4541]
gi|282568641|gb|EFB74176.1| protein TolQ [Providencia rustigianii DSM 4541]
Length = 227
Score = 227 bits (580), Expect = 8e-58, Method: Composition-based stats.
Identities = 68/221 (30%), Positives = 111/221 (50%), Gaps = 3/221 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
+ D++I LF++ L V+ I+ +L FSI SW++IIQ++ R+ FE FWSG
Sbjct: 1 MTDMNILDLFLKASLLVQIIMFVLLGFSIASWAIIIQRTKILNAATREAEAFEDKFWSGI 60
Query: 68 SLETVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
L + K + + G IF S E+ + +P + R M +++ REL
Sbjct: 61 ELSRLYKESQARRDALGGTEQIFYSGFKEFVRLHQANIHAPDAVITGAARAMRISMNREL 120
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILL 184
E + + FLG++ S +G+ G V G+M F ++ + + PGI E+LI+ +
Sbjct: 121 ESVESHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMVAPGIAEALIATAI 180
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
GL +IP+ +A+N+ K + F EF AIL RQ
Sbjct: 181 GLFAAIPAVMAFNRLNLRVNKLEQSYDNFMEEFLAILHRQA 221
>gi|171059622|ref|YP_001791971.1| protein TolQ [Leptothrix cholodnii SP-6]
gi|170777067|gb|ACB35206.1| protein TolQ [Leptothrix cholodnii SP-6]
Length = 236
Score = 227 bits (580), Expect = 8e-58, Method: Composition-based stats.
Identities = 69/220 (31%), Positives = 116/220 (52%), Gaps = 3/220 (1%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
D++I L Q V+ ++ L + S+ SW+VI K + +R FE+ FWSG++
Sbjct: 3 QDLNILHLITQASFVVQLVMATLMLVSLASWAVIFGKLIGLRRVRGANDGFEREFWSGRN 62
Query: 69 LETVCKSLKNHH--NIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
++ + + + L IF S M E+ K ++ + D R M ++ RE++
Sbjct: 63 VQELYAHSERNAEIGAPLERIFASGMREFLKLRERRVGDAGSLLDGARRAMRASLQREMD 122
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLG 185
+ LSFL ++ S VG+ G V G+M F +A ++ ++ PGI E+L++ +G
Sbjct: 123 AVEHNLSFLATVGSVSPYVGLFGTVWGIMHAFTGLANVQQVSLATVAPGIAEALVATAIG 182
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
L +IP+ IAYN+F D + A+Q+E F EFS IL+R
Sbjct: 183 LFAAIPAVIAYNRFSRDIDRIAIQLETFVEEFSNILARNI 222
>gi|153208745|ref|ZP_01946983.1| TolQ protein [Coxiella burnetii 'MSU Goat Q177']
gi|154706732|ref|YP_001423834.1| TolQ [Coxiella burnetii Dugway 5J108-111]
gi|161830814|ref|YP_001597409.1| TolQ protein [Coxiella burnetii RSA 331]
gi|212212075|ref|YP_002303011.1| TolQ [Coxiella burnetii CbuG_Q212]
gi|212219286|ref|YP_002306073.1| TolQ [Coxiella burnetii CbuK_Q154]
gi|120575777|gb|EAX32401.1| TolQ protein [Coxiella burnetii 'MSU Goat Q177']
gi|154356018|gb|ABS77480.1| TolQ [Coxiella burnetii Dugway 5J108-111]
gi|161762681|gb|ABX78323.1| TolQ protein [Coxiella burnetii RSA 331]
gi|212010485|gb|ACJ17866.1| TolQ [Coxiella burnetii CbuG_Q212]
gi|212013548|gb|ACJ20928.1| TolQ [Coxiella burnetii CbuK_Q154]
Length = 237
Score = 227 bits (580), Expect = 8e-58, Method: Composition-based stats.
Identities = 71/217 (32%), Positives = 116/217 (53%), Gaps = 3/217 (1%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLET 71
++++ L VK +I LLF+ SI SWS+IIQ+ RR+ ++FE LFWSG L T
Sbjct: 6 TLWSFVAHASLIVKMVIFLLFLASIASWSIIIQRVFFVKRTRREMKKFEHLFWSGVDLTT 65
Query: 72 VCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+ L + IG+++IF + +E+ + + +P I + R M +A +RE + +
Sbjct: 66 LYNRLSEKKDKLIGMSSIFYAGFNEFTRLRQELGSNPKAILEGTHRAMRIAQSREADLLE 125
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCV 188
LSFL ++ S VG+ G V G+M F+++ + + PGI E+LI+ +GL
Sbjct: 126 RNLSFLATVGSTSPYVGLFGTVWGIMTSFRALGAVQQVTIAMVAPGISEALIATAVGLFA 185
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ IAYN+F + + F E IL R+
Sbjct: 186 AIPAVIAYNRFSNELNAITQNYDTFQEEILNILHRRV 222
>gi|56460191|ref|YP_155472.1| TonB system biopolymer transport component [Idiomarina loihiensis
L2TR]
gi|56179201|gb|AAV81923.1| TonB system biopolymer transport component [Idiomarina loihiensis
L2TR]
Length = 236
Score = 227 bits (580), Expect = 9e-58, Method: Composition-based stats.
Identities = 65/222 (29%), Positives = 107/222 (48%), Gaps = 3/222 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
++S LFMQ L VK ++ +L S+ W +I Q+ R +FE FWSG L
Sbjct: 4 ELSFIDLFMQASLLVKLVMVMLLAMSVWGWVLIFQRKKVLKQARNDALKFEDRFWSGVDL 63
Query: 70 ETVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + + G+ +F + E+ + + + + + R M VA ARE E+
Sbjct: 64 ARLYQEISARAKNARGMELLFHAGFKEYARLRNHSTTNTQTMLEGAFRAMRVAHARETEK 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ L L ++ S +G+ G V G+M F ++ + + PGI E+LI+ +GL
Sbjct: 124 LDNNLGILATIGSISPYIGLFGTVWGIMNAFIALGAVQQATLAMVAPGIAEALIATAMGL 183
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
+IP+ IAYN+F +K Q F +EF +IL RQ+
Sbjct: 184 FAAIPAVIAYNRFTTSVEKVDNQYMNFIDEFISILQRQSSAQ 225
>gi|254482599|ref|ZP_05095838.1| protein TolQ [marine gamma proteobacterium HTCC2148]
gi|214037290|gb|EEB77958.1| protein TolQ [marine gamma proteobacterium HTCC2148]
Length = 236
Score = 227 bits (579), Expect = 1e-57, Method: Composition-based stats.
Identities = 65/221 (29%), Positives = 114/221 (51%), Gaps = 6/221 (2%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+S+ L + V+ ++ +L SILSW +I+Q+ + R + FE+ FWSG L
Sbjct: 5 LSLIDLVINASFTVQMVMLILVGASILSWYMIVQRFLYLHNAREEMYGFEERFWSGIDLS 64
Query: 71 TVCKSLKNHHN-----IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
+ + + +G+ +IF + E+ + + I + R M VA+ RE
Sbjct: 65 QLYREGNEKASDGQAILGMESIFRAGFKEFSRLAQQSEMDSEAILEGSRRAMRVAVMREE 124
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILL 184
E + L+FL S+ S +G+ G V G+M F+ +A + ++ PGI E+L++ +
Sbjct: 125 ERLERHLAFLASVGSTSPYIGLFGTVWGIMHSFRGLANSTQATLATVAPGISEALVATAM 184
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
GL +IP+ +AYN+F + F + + F +EFS+IL RQ
Sbjct: 185 GLFAAIPAVLAYNRFSAKVEVFGNRYDTFVDEFSSILYRQA 225
>gi|84501649|ref|ZP_00999821.1| proton transporter TolQ [Oceanicola batsensis HTCC2597]
gi|84390270|gb|EAQ02829.1| proton transporter TolQ [Oceanicola batsensis HTCC2597]
Length = 231
Score = 227 bits (579), Expect = 1e-57, Method: Composition-based stats.
Identities = 88/231 (38%), Positives = 131/231 (56%), Gaps = 4/231 (1%)
Query: 1 MNNYGLAI---MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFR 57
M LAI +D S++ALF + L VK ++ LL S SWS+IIQK + + + R +
Sbjct: 1 METETLAIAQHVDFSMWALFARATLTVKLVMLLLIAASFWSWSIIIQKIITYRSARSEAT 60
Query: 58 EFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMM 117
+F++ FWSG+ L+ + + + +F + M+EW++S + + G Q RIDR M
Sbjct: 61 KFDRSFWSGEPLDEFYEQIGPDPSGRAHRVFAAGMTEWRRSHREDGQMIAGAQARIDRSM 120
Query: 118 DVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGII 176
DVAIA+E E + L L ++ S VG+ G V G+M F IA + N+ V PGI
Sbjct: 121 DVAIAKEAEGLQAGLPVLATVGSTAPFVGLFGTVWGIMHAFIGIAESQNTNLAVVAPGIA 180
Query: 177 ESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEG 227
E+L++ LGL +IP+ I YNK D+ + E FA+EFS ILSRQ +
Sbjct: 181 EALLATGLGLLAAIPAVIFYNKLSTDADRLVGNYEAFADEFSTILSRQLDA 231
>gi|110679373|ref|YP_682380.1| putative proton transporter TolQ [Roseobacter denitrificans OCh
114]
gi|109455489|gb|ABG31694.1| putative proton transporter TolQ [Roseobacter denitrificans OCh
114]
Length = 231
Score = 227 bits (579), Expect = 1e-57, Method: Composition-based stats.
Identities = 82/230 (35%), Positives = 128/230 (55%), Gaps = 4/230 (1%)
Query: 1 MNNYGLAI---MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFR 57
M LA+ +D S F LF + L VK ++ +L + S +WSVI+ K + + R +
Sbjct: 1 MEAETLAMAHEIDFSFFGLFARATLIVKIVMIMLIVASFWAWSVIVIKLILYRKTRHEAA 60
Query: 58 EFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMM 117
F++ FWSG+ L+ + + + + G IF + M EW++S G RIDR M
Sbjct: 61 VFDRAFWSGEPLDGLFEEVGPAPSGGTEKIFAAGMMEWQRSHHDDGGLIAGATQRIDRSM 120
Query: 118 DVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGII 176
DVAI +E E + + L+ L ++ S+ +G+ G V+G+M F IA + N+ V PGI
Sbjct: 121 DVAINKEAEHLRDGLTVLATIGSSTPFIGLFGTVIGIMNAFIEIAEQQNTNLAVVAPGIA 180
Query: 177 ESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
E+L++ LGL +IP+ I YNK D+ + E FA+EF+ ILSRQ +
Sbjct: 181 EALLATGLGLFAAIPAVIYYNKLSADADRILAGYESFADEFATILSRQLD 230
>gi|90417113|ref|ZP_01225041.1| tolQ protein [marine gamma proteobacterium HTCC2207]
gi|90331129|gb|EAS46385.1| tolQ protein [marine gamma proteobacterium HTCC2207]
Length = 232
Score = 226 bits (578), Expect = 1e-57, Method: Composition-based stats.
Identities = 74/225 (32%), Positives = 120/225 (53%), Gaps = 6/225 (2%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
++SI+ L + V+ ++ LLF+ SI+SW +I+Q+ + +R FR+FE FWSG L
Sbjct: 8 NMSIWHLISNASVLVQLVMGLLFVASIMSWVMIVQRGIFLNAAQRGFRQFEDAFWSGVDL 67
Query: 70 ETVCKSLKNHH-----NIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARE 124
+ L G+ +F + E+ + G+ I + DR M VA++RE
Sbjct: 68 NKLYGELTQEAKEHGGRDGVENVFRAGFREFNRLAQVGSADSDTIMEGTDRAMRVALSRE 127
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISIL 183
E++ L FL S++S +G+ G V G+M F+ +A + ++ PGI E+LI+
Sbjct: 128 DEKLNISLPFLASVASVSPYIGLFGTVWGIMNSFRGLAMVQQATLATVAPGISEALIATA 187
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
+GL +IP+ IAYN++ + E FA EFS+IL RQ N
Sbjct: 188 MGLFAAIPALIAYNRYAAIVETMNSSYETFAEEFSSILHRQIRAN 232
>gi|119477232|ref|ZP_01617468.1| TolQ protein [marine gamma proteobacterium HTCC2143]
gi|119449595|gb|EAW30833.1| TolQ protein [marine gamma proteobacterium HTCC2143]
Length = 240
Score = 226 bits (578), Expect = 1e-57, Method: Composition-based stats.
Identities = 67/223 (30%), Positives = 114/223 (51%), Gaps = 6/223 (2%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
++S++ L L V+ ++ LLFIFS +SW +I+Q+ F R + FE FWSG L
Sbjct: 4 ELSVWQLVANASLTVQAVMALLFIFSAISWFMIVQRGFYFRACNRAMQNFEHQFWSGMDL 63
Query: 70 ETVCKSLKNH-----HNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARE 124
+ + +G+ +IF + E+ + + + R M VA +RE
Sbjct: 64 SQLFRQGSADIESGASFVGMESIFRAGFKEFSRLRQQPGVDADAVMQGAQRSMRVATSRE 123
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISIL 183
E++ L FL ++ S VG+ G V G+M FQS+A + ++ PGI E+L++
Sbjct: 124 EEQMDTHLPFLATVGSISPYVGLFGTVWGIMTSFQSLATMNQATLATVAPGISEALVATA 183
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+GL +IP+ +AYN++ + + + F++EF IL RQ
Sbjct: 184 MGLFAAIPAVMAYNRYSSRVEILLNKYDSFSDEFYGILHRQAH 226
>gi|268590339|ref|ZP_06124560.1| protein TolQ [Providencia rettgeri DSM 1131]
gi|291314248|gb|EFE54701.1| protein TolQ [Providencia rettgeri DSM 1131]
Length = 227
Score = 226 bits (577), Expect = 2e-57, Method: Composition-based stats.
Identities = 68/221 (30%), Positives = 111/221 (50%), Gaps = 3/221 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
+ D++I LF++ L V+ I+ +L FSI SW++IIQ++ R+ FE FWSG
Sbjct: 1 MTDMNILDLFLKASLLVQLIMFVLIGFSIASWAIIIQRTKILNAATREAEAFEDKFWSGI 60
Query: 68 SLETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
L + K + + G IF S E+ + +P + R M +++ REL
Sbjct: 61 ELSRLYKESQARRDELSGAEQIFHSGFKEFVRLHQANIHAPDAVVTGASRAMRISMNREL 120
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILL 184
E + + FLG++ S +G+ G V G+M F ++ + + PGI E+LI+ +
Sbjct: 121 ESVEAHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMVAPGIAEALIATAI 180
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
GL +IP+ +A+N+ K + F EF AIL RQ
Sbjct: 181 GLFAAIPAVMAFNRLNLRVSKLEQNYDNFMEEFLAILHRQA 221
>gi|86139149|ref|ZP_01057719.1| proton transporter TolQ [Roseobacter sp. MED193]
gi|85823993|gb|EAQ44198.1| proton transporter TolQ [Roseobacter sp. MED193]
Length = 231
Score = 226 bits (577), Expect = 2e-57, Method: Composition-based stats.
Identities = 87/219 (39%), Positives = 125/219 (57%), Gaps = 1/219 (0%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
+D S++ LF + VK ++ +L SI SW +IIQK +N+ RR+ +F+Q FWSG+
Sbjct: 12 IDFSMWGLFARATFTVKLVMLMLTAASIWSWGIIIQKLINYRQARRRAAQFDQAFWSGEP 71
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
L+ + L IF + M+EW++S G Q RIDR MDVAIA+E E++
Sbjct: 72 LDGLFDQLGPEPTGHSERIFAAGMAEWRRSHRSDGGLIPGAQARIDRSMDVAIAKETEDL 131
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
LS L ++ S VG+ G V G+M F IA S N+ V PGI E+L++ LGL
Sbjct: 132 QRGLSVLATVGSTAPFVGLFGTVWGIMTAFIEIAEQQSTNLAVVAPGIAEALLATGLGLL 191
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ + YNK DS + E FA+EF+ ILSRQ +
Sbjct: 192 AAIPAVVFYNKLSADSDRILGGYEAFADEFATILSRQLD 230
>gi|325498080|gb|EGC95939.1| colicin uptake protein TolQ [Escherichia fergusonii ECD227]
Length = 227
Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats.
Identities = 68/218 (31%), Positives = 114/218 (52%), Gaps = 3/218 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
++I LF++ L VK I+ +L FSI SW++IIQ++ R+ FE FWSG L
Sbjct: 1 MNILDLFLKASLLVKLIMLILIGFSIASWAIIIQRTRILNAAAREAEAFEDKFWSGIELS 60
Query: 71 TVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ + + + G IF S E+ + + +P + + R M +++ RELE +
Sbjct: 61 RLYQESQGRRDNLSGSEQIFYSGFKEFVRLHRANSHAPEAVVEGASRAMRISMNRELENL 120
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
+ FLG++ S +G+ G V G+M F ++ + + PGI E+LI+ +GL
Sbjct: 121 ETHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMVAPGIAEALIATAIGLF 180
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ +AYN+ + K + + F EF+AIL RQ
Sbjct: 181 AAIPAVMAYNRLNQRVNKLELNYDNFMEEFTAILHRQA 218
>gi|110640945|ref|YP_668673.1| colicin uptake protein TolQ [Escherichia coli 536]
gi|312965173|ref|ZP_07779410.1| protein TolQ [Escherichia coli 2362-75]
gi|110342537|gb|ABG68774.1| TolQ protein [Escherichia coli 536]
gi|307552588|gb|ADN45363.1| membrane spanning protein in TolA-TolQ-TolR complex [Escherichia
coli ABU 83972]
gi|307627849|gb|ADN72153.1| colicin uptake protein TolQ [Escherichia coli UM146]
gi|312290264|gb|EFR18147.1| protein TolQ [Escherichia coli 2362-75]
gi|320194084|gb|EFW68716.1| MotA/TolQ/ExbB proton channel family protein [Escherichia coli
WV_060327]
gi|330910488|gb|EGH38998.1| motA/TolQ/ExbB proton channel family protein [Escherichia coli
AA86]
Length = 227
Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats.
Identities = 68/218 (31%), Positives = 114/218 (52%), Gaps = 3/218 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
++I LF++ L VK I+ +L FSI SW++IIQ++ R+ FE FWSG L
Sbjct: 1 MNILDLFLKASLLVKLIMLILIGFSIASWAIIIQRTRILNAAAREAEAFEDKFWSGIELS 60
Query: 71 TVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ + + + G IF S E+ + + +P + + R M +++ RELE +
Sbjct: 61 RLYQESQGKRDNLSGSEQIFYSGFKEFVRLHRANSHAPEAVVEGASRAMRISMNRELENL 120
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
+ FLG++ S +G+ G V G+M F ++ + + PGI E+LI+ +GL
Sbjct: 121 ETHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMVAPGIAEALIATAIGLF 180
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ +AYN+ + K + + F EF+AIL RQ
Sbjct: 181 AAIPAVMAYNRLNQRVNKLELNYDNFMEEFTAILHRQA 218
>gi|110804637|ref|YP_688157.1| colicin uptake protein TolQ [Shigella flexneri 5 str. 8401]
gi|170020918|ref|YP_001725872.1| colicin uptake protein TolQ [Escherichia coli ATCC 8739]
gi|170768990|ref|ZP_02903443.1| protein TolQ [Escherichia albertii TW07627]
gi|256021188|ref|ZP_05435053.1| colicin uptake protein TolQ [Shigella sp. D9]
gi|293403992|ref|ZP_06647986.1| colicin uptake protein TolQ [Escherichia coli FVEC1412]
gi|293409121|ref|ZP_06652697.1| TolQ protein [Escherichia coli B354]
gi|293414022|ref|ZP_06656671.1| TolQ protein [Escherichia coli B185]
gi|293433005|ref|ZP_06661433.1| TolQ [Escherichia coli B088]
gi|298379772|ref|ZP_06989377.1| biopolymer transporter TolQ [Escherichia coli FVEC1302]
gi|110614185|gb|ABF02852.1| TolQ protein [Shigella flexneri 5 str. 8401]
gi|169755846|gb|ACA78545.1| protein TolQ [Escherichia coli ATCC 8739]
gi|170122062|gb|EDS90993.1| protein TolQ [Escherichia albertii TW07627]
gi|291323824|gb|EFE63246.1| TolQ [Escherichia coli B088]
gi|291428578|gb|EFF01603.1| colicin uptake protein TolQ [Escherichia coli FVEC1412]
gi|291434080|gb|EFF07053.1| TolQ protein [Escherichia coli B185]
gi|291469589|gb|EFF12073.1| TolQ protein [Escherichia coli B354]
gi|298279470|gb|EFI20978.1| biopolymer transporter TolQ [Escherichia coli FVEC1302]
gi|315135394|dbj|BAJ42553.1| inner membrane protein [Escherichia coli DH1]
gi|323153747|gb|EFZ39994.1| protein TolQ [Escherichia coli EPECa14]
gi|323938276|gb|EGB34534.1| TolQ protein [Escherichia coli E1520]
gi|323946997|gb|EGB43011.1| TolQ protein [Escherichia coli H120]
gi|323972023|gb|EGB67243.1| TolQ protein [Escherichia coli TA007]
gi|323976282|gb|EGB71372.1| TolQ protein [Escherichia coli TW10509]
gi|326345733|gb|EGD69472.1| MotA/TolQ/ExbB proton channel family protein [Escherichia coli
O157:H7 str. 1125]
gi|327254426|gb|EGE66048.1| protein TolQ [Escherichia coli STEC_7v]
gi|332097657|gb|EGJ02632.1| protein TolQ [Shigella boydii 3594-74]
gi|332342074|gb|AEE55408.1| colicin uptake protein TolQ [Escherichia coli UMNK88]
gi|332763943|gb|EGJ94181.1| protein TolQ [Shigella flexneri K-671]
gi|333007352|gb|EGK26832.1| protein TolQ [Shigella flexneri VA-6]
Length = 227
Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats.
Identities = 68/218 (31%), Positives = 114/218 (52%), Gaps = 3/218 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
++I LF++ L VK I+ +L FSI SW++IIQ++ R+ FE FWSG L
Sbjct: 1 MNILDLFLKASLLVKLIMLILIGFSIASWAIIIQRTRILNAAAREAEAFEDKFWSGIELS 60
Query: 71 TVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ + + + G IF S E+ + + +P + + R M +++ RELE +
Sbjct: 61 RLYQESQGKRDNLTGSEQIFYSGFKEFVRLHRANSHAPEAVVEGASRAMRISMNRELENL 120
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
+ FLG++ S +G+ G V G+M F ++ + + PGI E+LI+ +GL
Sbjct: 121 ETHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMVAPGIAEALIATAIGLF 180
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ +AYN+ + K + + F EF+AIL RQ
Sbjct: 181 AAIPAVMAYNRLNQRVNKLELNYDNFMEEFTAILHRQA 218
>gi|254427665|ref|ZP_05041372.1| protein TolQ [Alcanivorax sp. DG881]
gi|196193834|gb|EDX88793.1| protein TolQ [Alcanivorax sp. DG881]
Length = 228
Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats.
Identities = 71/228 (31%), Positives = 114/228 (50%), Gaps = 4/228 (1%)
Query: 6 LAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS 65
+ D+S+ +L + V+ ++ LL + S+ SW +I+ + R R FE+ FWS
Sbjct: 2 VEASDMSVVSLISHATIVVQLVMALLILASLTSWYMIVGRFRVLGRAHRAGRAFEEKFWS 61
Query: 66 GQSLETVCKSLKNHH--NIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAR 123
L ++ + + G AIF + E+ + K R + D R M VA+ R
Sbjct: 62 SDDLASLYNQSRKDPDVDSGTEAIFRAGFQEFVRL-SKSTRGAEAVMDGAQRAMRVALQR 120
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISI 182
E +T+ L FL ++ S VG+ G V G+M F ++A + V PGI E+LI+
Sbjct: 121 EQTRLTKHLPFLATVGSTSPYVGLFGTVWGIMNSFMALANVKQATLSVVAPGIAEALIAT 180
Query: 183 LLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
+GL +IP+ +AYN+F S + E FA EFS++L RQ G +
Sbjct: 181 AIGLFAAIPAVMAYNRFSAQSDALLTENEMFAEEFSSVLHRQAHGREA 228
>gi|254511091|ref|ZP_05123158.1| protein TolQ [Rhodobacteraceae bacterium KLH11]
gi|221534802|gb|EEE37790.1| protein TolQ [Rhodobacteraceae bacterium KLH11]
Length = 231
Score = 226 bits (576), Expect = 3e-57, Method: Composition-based stats.
Identities = 81/219 (36%), Positives = 124/219 (56%), Gaps = 1/219 (0%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
+D S++ L+ + VK ++ +L SI SW++IIQK +N+ RR+ + F++ FWSG
Sbjct: 12 IDFSMWGLYARATFIVKLVMLMLIGASIWSWAIIIQKLINYRAARREAQVFDESFWSGNP 71
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
L+ + + + + IF + M EW++S G RIDR MDVAIA+E E +
Sbjct: 72 LDELFERIGTQPDGSSEKIFAAGMIEWRRSHRTDGGLIAGATARIDRSMDVAIAKEAEAL 131
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
+ L L ++ S +G+ G V G+M F IA + N+ V PGI E+L++ LGL
Sbjct: 132 QKGLPILATVGSTAPFIGLFGTVWGIMNAFIEIAEQQNTNLAVVAPGIAEALLATGLGLL 191
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ I YNK DS + E FA+EF+ ILSRQ +
Sbjct: 192 AAIPAVIFYNKLSADSDRIVGGYEAFADEFATILSRQLD 230
>gi|331000271|ref|ZP_08323955.1| protein TolQ [Parasutterella excrementihominis YIT 11859]
gi|329572437|gb|EGG54090.1| protein TolQ [Parasutterella excrementihominis YIT 11859]
Length = 227
Score = 225 bits (575), Expect = 3e-57, Method: Composition-based stats.
Identities = 71/225 (31%), Positives = 111/225 (49%), Gaps = 6/225 (2%)
Query: 7 AIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG 66
A D+SI L V+ ++ +L IFS++SW++I QK RR+ R F++ FW G
Sbjct: 3 ASADLSIITLVAHASAVVQIVLAILLIFSLVSWTIIFQKWFQMSRARREARNFDKRFWGG 62
Query: 67 QSLETVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPI---GIQDRIDRMMDVAI 121
L + +S + IF S M+E+ +S + G+ D + R M
Sbjct: 63 ADLNKLYESATERRSSIGPQEGIFYSGMTEFLRSRASNLEARAGTFGVIDGVSRAMRARY 122
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLI 180
REL+ + LS L ++ S +G+ G V G+M F + S ++ V PGI E+L+
Sbjct: 123 QRELDILESGLSVLATIGSVSPYIGLFGTVWGIMDAFTGLGNLESASLAVVAPGIAEALV 182
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+ +GL +IP+ I YN+F + + Q E F EF IL RQ
Sbjct: 183 ATAIGLFAAIPAVIGYNRFAYSLDRLSSQYESFMQEFQNILGRQA 227
>gi|309786416|ref|ZP_07681042.1| protein TolQ [Shigella dysenteriae 1617]
gi|308925810|gb|EFP71291.1| protein TolQ [Shigella dysenteriae 1617]
Length = 227
Score = 225 bits (575), Expect = 3e-57, Method: Composition-based stats.
Identities = 69/218 (31%), Positives = 114/218 (52%), Gaps = 3/218 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
++I LF++ L VK I+ +L FSI SW+VIIQ++ R+ FE FWSG L
Sbjct: 1 MNILDLFLKASLLVKLIMLILIGFSIASWAVIIQRTRILNAAAREAEAFEDKFWSGIELS 60
Query: 71 TVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ + + + G IF S E+ + + +P + + R M +++ RELE +
Sbjct: 61 RLYQESQGKRDNLTGSEQIFYSGFKEFVRLHRANSHAPEAVVEGASRAMRISMNRELENL 120
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
+ FLG++ S +G+ G V G+M F ++ + + PGI E+LI+ +GL
Sbjct: 121 ETHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMVAPGIAEALIATAIGLF 180
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ +AYN+ + K + + F EF+AIL RQ
Sbjct: 181 AAIPAVMAYNRLNQRVNKLELNYDNFMEEFTAILHRQA 218
>gi|15604178|ref|NP_220693.1| TOLQ protein (tolQ) [Rickettsia prowazekii str. Madrid E]
gi|3860870|emb|CAA14770.1| TOLQ PROTEIN (tolQ) [Rickettsia prowazekii]
gi|292571910|gb|ADE29825.1| TolQ [Rickettsia prowazekii Rp22]
Length = 241
Score = 225 bits (575), Expect = 3e-57, Method: Composition-based stats.
Identities = 75/220 (34%), Positives = 125/220 (56%), Gaps = 3/220 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
++SI +L + K ++ +L SI SWS+I+ K ++R+ + FE +FWSG L
Sbjct: 18 NLSILSLISSADIIGKSVMLMLLFASIWSWSIILHKIFRLAQVQRRIQSFENVFWSGCVL 77
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPI--GIQDRIDRMMDVAIARELEE 127
E + +S+K N LA IF+SAM+E KG + ++RI M +A RE+E+
Sbjct: 78 EQLYESIKKSVNNPLALIFVSAMNECNSLNTKGFSEALKNNHKERIMSAMYLAQNREIEK 137
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
+ + L+ L ++ S+ +G+ G V G+M FQSIA + ++ V PGI E+L++ +GL
Sbjct: 138 LEQNLNVLATIGSSAPFIGLFGTVWGIMHSFQSIASSKNTSLAVVAPGIAEALLATAIGL 197
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
V+IP+ I YN I ++E F +E ++ILS+ +
Sbjct: 198 FVAIPAVIFYNYLISRITLINNKIEDFISELNSILSKAID 237
>gi|303258200|ref|ZP_07344207.1| protein TolQ [Burkholderiales bacterium 1_1_47]
gi|302858953|gb|EFL82037.1| protein TolQ [Burkholderiales bacterium 1_1_47]
Length = 228
Score = 225 bits (573), Expect = 5e-57, Method: Composition-based stats.
Identities = 71/225 (31%), Positives = 111/225 (49%), Gaps = 6/225 (2%)
Query: 7 AIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG 66
A D+SI L V+ ++ +L IFS++SW++I QK RR+ R F++ FW G
Sbjct: 4 ASADLSIITLVAHASAVVQIVLAILLIFSLVSWTIIFQKWFQMSRARREARNFDKRFWGG 63
Query: 67 QSLETVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPI---GIQDRIDRMMDVAI 121
L + +S + IF S M+E+ +S + G+ D + R M
Sbjct: 64 ADLNKLYESATERRSSIGPQEGIFYSGMTEFLRSRASNLEARAGTFGVIDGVSRAMRARY 123
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLI 180
REL+ + LS L ++ S +G+ G V G+M F + S ++ V PGI E+L+
Sbjct: 124 QRELDILESGLSVLATIGSVSPYIGLFGTVWGIMDAFTGLGNLESASLAVVAPGIAEALV 183
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+ +GL +IP+ I YN+F + + Q E F EF IL RQ
Sbjct: 184 ATAIGLFAAIPAVIGYNRFAYSLDRLSSQYESFMQEFQNILGRQA 228
>gi|259417777|ref|ZP_05741696.1| protein TolQ [Silicibacter sp. TrichCH4B]
gi|259346683|gb|EEW58497.1| protein TolQ [Silicibacter sp. TrichCH4B]
Length = 231
Score = 225 bits (573), Expect = 6e-57, Method: Composition-based stats.
Identities = 82/219 (37%), Positives = 124/219 (56%), Gaps = 1/219 (0%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
+D S++ LF + L VK ++ +L SI SWS+I QK + + + RR+ + FE+ FWSG
Sbjct: 12 IDFSMWGLFARATLTVKLVMIMLIGASIWSWSIIAQKLITYRSARREAQVFERAFWSGNP 71
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
L+ + + + + IF + M+EW++S G Q RIDR MDVAI++E E +
Sbjct: 72 LDELYEDIGADPSGHSERIFAAGMTEWRRSHRTDGALIPGAQARIDRSMDVAISKESEGL 131
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
L L ++ S +G+ G V G+M F IA + N+ V PGI E+L++ LGL
Sbjct: 132 QGGLQILATIGSTAPFIGLFGTVWGIMNAFIEIAEQQNTNLAVVAPGIAEALLATGLGLL 191
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ I YNK DS + E FA+EF+ I SRQ +
Sbjct: 192 AAIPAVIFYNKLSADSDRIIGGYEAFADEFATIFSRQLD 230
>gi|74318227|ref|YP_315967.1| MotA/TolQ/ExbB proton channel family protein [Thiobacillus
denitrificans ATCC 25259]
gi|74057722|gb|AAZ98162.1| MotA/TolQ/ExbB proton channel family [Thiobacillus denitrificans
ATCC 25259]
Length = 231
Score = 225 bits (573), Expect = 6e-57, Method: Composition-based stats.
Identities = 67/220 (30%), Positives = 103/220 (46%), Gaps = 3/220 (1%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
D+S+ L + L V+ ++ LL S++SW I K R FE FW G
Sbjct: 7 QDLSLLHLILNASLPVQIVMLLLLGASLMSWWYIFIKMFALKRALRVTDRFEHEFWGGGD 66
Query: 69 LETVCK--SLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
+ + + + + IF + E+ K + S I D R M + REL+
Sbjct: 67 IHAMYERVAAGREEASEMERIFEAGFREFMKLRQQAGLSLNVIIDGTRRAMRASYQRELD 126
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV-SIPGIIESLISILLG 185
+ L+FL ++ S VG+ G V G+M FQ +A + PGI E+LI+ +G
Sbjct: 127 ALESHLAFLATVGSVSPYVGLFGTVWGIMLAFQGLATVAQATLAQVAPGIAEALIATAMG 186
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
L +IP+ + YN++ D + A +ME F EFS IL RQ
Sbjct: 187 LFAAIPAVVGYNRYTHDVDRLANRMESFMEEFSNILQRQV 226
>gi|213028045|ref|ZP_03342492.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Typhi str. 404ty]
gi|213051764|ref|ZP_03344642.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Typhi str. E00-7866]
gi|213425395|ref|ZP_03358145.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Typhi str. E02-1180]
gi|213649141|ref|ZP_03379194.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Typhi str. J185]
gi|213857295|ref|ZP_03384266.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Typhi str. M223]
gi|224582564|ref|YP_002636362.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|238911678|ref|ZP_04655515.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Tennessee str. CDC07-0191]
gi|289824365|ref|ZP_06543958.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Typhi str. E98-3139]
gi|291084643|ref|ZP_06540569.2| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Typhi str. AG3]
gi|224467091|gb|ACN44921.1| tolQ protein [Salmonella enterica subsp. enterica serovar Paratyphi
C strain RKS4594]
gi|312911772|dbj|BAJ35746.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Typhimurium str. T000240]
gi|320085016|emb|CBY94805.1| Protein tolQ [Salmonella enterica subsp. enterica serovar
Weltevreden str. 2007-60-3289-1]
gi|321226324|gb|EFX51375.1| MotA/TolQ/ExbB proton channel family protein [Salmonella enterica
subsp. enterica serovar Typhimurium str. TN061786]
gi|322615821|gb|EFY12739.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Montevideo str. 315996572]
gi|322621380|gb|EFY18236.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-1]
gi|322628910|gb|EFY25690.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-4]
gi|322634889|gb|EFY31619.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-1]
gi|322636583|gb|EFY33287.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-2]
gi|322641767|gb|EFY38401.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Montevideo str. 531954]
gi|322647824|gb|EFY44304.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Montevideo str. NC_MB110209-0054]
gi|322651846|gb|EFY48215.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Montevideo str. OH_2009072675]
gi|322652657|gb|EFY49006.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Montevideo str. CASC_09SCPH15965]
gi|322658464|gb|EFY54727.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Montevideo str. 19N]
gi|322664933|gb|EFY61124.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Montevideo str. 81038-01]
gi|322668398|gb|EFY64554.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Montevideo str. MD_MDA09249507]
gi|322675254|gb|EFY71330.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Montevideo str. 366867]
gi|322679680|gb|EFY75721.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Montevideo str. 413180]
gi|322684844|gb|EFY80843.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Montevideo str. 446600]
gi|323193162|gb|EFZ78381.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Montevideo str. 609458-1]
gi|323200613|gb|EFZ85688.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Montevideo str. 556150-1]
gi|323202284|gb|EFZ87332.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Montevideo str. 609460]
gi|323205448|gb|EFZ90414.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Montevideo str. 507440-20]
gi|323213512|gb|EFZ98305.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Montevideo str. 556152]
gi|323215347|gb|EGA00092.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Montevideo str. MB101509-0077]
gi|323221779|gb|EGA06186.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Montevideo str. MB102109-0047]
gi|323228091|gb|EGA12227.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Montevideo str. MB110209-0055]
gi|323234165|gb|EGA18254.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009083312]
gi|323238140|gb|EGA22198.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009085258]
gi|323243575|gb|EGA27593.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Montevideo str. 315731156]
gi|323247400|gb|EGA31359.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2009159199]
gi|323251389|gb|EGA35261.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008282]
gi|323258473|gb|EGA42145.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008283]
gi|323270962|gb|EGA54397.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008287]
Length = 227
Score = 224 bits (572), Expect = 6e-57, Method: Composition-based stats.
Identities = 68/218 (31%), Positives = 114/218 (52%), Gaps = 3/218 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
++I LF++ L VK I+ +L FSI SW++IIQ++ R+ FE FWSG L
Sbjct: 1 MNILDLFLKASLLVKLIMLILIGFSIASWAIIIQRTRILNAAAREAEAFEDKFWSGIELS 60
Query: 71 TVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ + + + G IF S E+ + + +P + + R M +++ RELE +
Sbjct: 61 RLYQESQGRRDSLSGSEQIFYSGFKEFVRLHRANSHAPEAVVEGASRAMRISMNRELETL 120
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
+ FLG++ S +G+ G V G+M F ++ + + PGI E+LI+ +GL
Sbjct: 121 ETHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMVAPGIAEALIATAIGLF 180
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ +AYN+ + K + + F EF+AIL RQ
Sbjct: 181 AAIPAVMAYNRLNQRVNKLELNYDNFMEEFTAILHRQA 218
>gi|99082208|ref|YP_614362.1| MotA/TolQ/ExbB proton channel [Ruegeria sp. TM1040]
gi|99038488|gb|ABF65100.1| MotA/TolQ/ExbB proton channel [Ruegeria sp. TM1040]
Length = 231
Score = 224 bits (572), Expect = 7e-57, Method: Composition-based stats.
Identities = 84/219 (38%), Positives = 125/219 (57%), Gaps = 1/219 (0%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
+D S++ LF + L VK ++ +L + SI SWS+IIQK + + T RR+ + FE+ FWSG
Sbjct: 12 IDFSMWGLFARATLTVKLVMIMLIVASIWSWSIIIQKVITYRTARREAQVFERAFWSGNP 71
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
L+ + + + + IF + M EW++S G Q RIDR MDVAI++E E +
Sbjct: 72 LDELFEEIGAEPSGRSERIFAAGMIEWRRSHRTDGALIPGAQARIDRSMDVAISKESEGL 131
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
L L ++ S +G+ G V G+M F IA + N+ V PGI E+L++ LGL
Sbjct: 132 QSGLQVLATIGSTTPFIGLFGTVWGIMNAFIEIAEQQNTNLAVVAPGIAEALLATGLGLL 191
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ I YNK DS + E FA+EF+ I SRQ +
Sbjct: 192 AAIPAVIFYNKLSADSDRIIGGYEAFADEFATIFSRQLD 230
>gi|157146638|ref|YP_001453957.1| colicin uptake protein TolQ [Citrobacter koseri ATCC BAA-895]
gi|157083843|gb|ABV13521.1| hypothetical protein CKO_02404 [Citrobacter koseri ATCC BAA-895]
Length = 227
Score = 224 bits (571), Expect = 8e-57, Method: Composition-based stats.
Identities = 68/218 (31%), Positives = 113/218 (51%), Gaps = 3/218 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
++I LF++ L VK I+ +L FSI SW++IIQ++ R+ FE FWSG L
Sbjct: 1 MNILDLFLKASLLVKLIMLILIGFSIASWAIIIQRTRILNAAAREAEAFEDKFWSGIELS 60
Query: 71 TVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ + + + G IF S E+ + +P + + R M +++ RELE +
Sbjct: 61 RLYQESQGRRDSLAGSEQIFYSGFKEFVRLHRANNHAPEAVVEGASRAMRISMNRELETL 120
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
+ FLG++ S +G+ G V G+M F ++ + + PGI E+LI+ +GL
Sbjct: 121 ETHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMVAPGIAEALIATAIGLF 180
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ +AYN+ + K + + F EF+AIL RQ
Sbjct: 181 AAIPAVMAYNRLNQRVNKLELNYDNFMEEFTAILHRQA 218
>gi|121998993|ref|YP_001003780.1| MotA/TolQ/ExbB proton channel [Halorhodospira halophila SL1]
gi|121590398|gb|ABM62978.1| Cell division and transport-associated protein TolQ [Halorhodospira
halophila SL1]
Length = 232
Score = 224 bits (571), Expect = 8e-57, Method: Composition-based stats.
Identities = 66/222 (29%), Positives = 117/222 (52%), Gaps = 4/222 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S+ L + L V+ ++ L + S+ SW++I+ K + + FE+ FW+G +L
Sbjct: 4 DVSVLRLILDASLLVQAVMLSLILASVTSWALILSKRLTLKRAEQTAIRFEEEFWAGGNL 63
Query: 70 ETVCKSLKNHHN---IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
+ + L + G+ IF + E+ + + P + + R M V+++REL+
Sbjct: 64 AEIYRRLSDEGPGEHAGMERIFRAGFQEFSRMRKQSGAPPSAVVEAAHRAMRVSVSRELD 123
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLG 185
L FL ++ S VG+ G V G+M F+++AG + ++ PGI E+LI+ LG
Sbjct: 124 NAERHLQFLATVGSVSPYVGLFGTVWGIMNSFRALAGQQQATLATVAPGIAEALIATALG 183
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEG 227
L +IP+ IAYN + +++ A + E F EF++IL R T
Sbjct: 184 LFAAIPAVIAYNHYANRAERLANRYETFVEEFTSILERHTHA 225
>gi|82703830|ref|YP_413396.1| MotA/TolQ/ExbB proton channel [Nitrosospira multiformis ATCC 25196]
gi|82411895|gb|ABB76004.1| Cell division and transport-associated protein TolQ [Nitrosospira
multiformis ATCC 25196]
Length = 228
Score = 223 bits (570), Expect = 1e-56, Method: Composition-based stats.
Identities = 68/222 (30%), Positives = 105/222 (47%), Gaps = 3/222 (1%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
D+S+F L L V+ ++ LL I S++SW I +K RQ EFE +FW G
Sbjct: 7 QDMSLFQLVGSASLPVQLVMLLLVIASLMSWWYIFRKLFVIREAERQCDEFENVFWKGTD 66
Query: 69 LETVCKSLKNHHNIG--LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
L + +S + + IF + E+ K + D R M RE++
Sbjct: 67 LNALFQSAAASRHTAGSMERIFEAGFREFMKHRRQPGMDTGTAMDSTRRAMRATYQREMD 126
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV-SIPGIIESLISILLG 185
+ LSFL ++ S VG+ G V G+M F+ ++ + PGI E+LI+ +G
Sbjct: 127 RLESHLSFLATVGSVSPYVGLFGTVWGIMNSFRGLSNVAQATIAHVAPGIAEALIATAMG 186
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEG 227
L +IP+ IAYN++ + A + E F E S +L RQ G
Sbjct: 187 LFAAIPAVIAYNRYASSMDRLATRFESFMEEMSNVLQRQAGG 228
>gi|254516706|ref|ZP_05128765.1| protein TolQ [gamma proteobacterium NOR5-3]
gi|219675129|gb|EED31496.1| protein TolQ [gamma proteobacterium NOR5-3]
Length = 236
Score = 223 bits (570), Expect = 1e-56, Method: Composition-based stats.
Identities = 66/224 (29%), Positives = 114/224 (50%), Gaps = 6/224 (2%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
+ ++SI L M G+ VK ++ LL S+ SW +I Q+ F + + +FE+ FWSG
Sbjct: 1 MDELSIIDLVMDAGVTVKLVMALLMAASVSSWYMIFQRFFYFRSAGAEMLDFEEHFWSGV 60
Query: 68 SLETVCKSLKNHHN-----IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIA 122
L + + IG+ +F + E+ + + + + R M VA+
Sbjct: 61 DLAQLYREGNERAADGEIIIGVEGVFRAGFKEFSRLAQQSDMDAEAMLEGARRAMRVAMM 120
Query: 123 RELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLIS 181
RE E + + L FL ++ S VG+ G V G+M F+ +A + ++ PGI E+L++
Sbjct: 121 REEERLEQHLPFLATVGSTSPYVGLFGTVWGIMNSFRGLANTSQATLATVAPGISEALVA 180
Query: 182 ILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+GL +IP+ +AYN+F + + + F +EFS+IL RQ
Sbjct: 181 TAMGLFAAIPAVMAYNRFASKVDVYGKRYDTFVDEFSSILGRQA 224
>gi|307294756|ref|ZP_07574598.1| protein TolQ [Sphingobium chlorophenolicum L-1]
gi|306879230|gb|EFN10448.1| protein TolQ [Sphingobium chlorophenolicum L-1]
Length = 235
Score = 223 bits (570), Expect = 1e-56, Method: Composition-based stats.
Identities = 73/235 (31%), Positives = 123/235 (52%), Gaps = 8/235 (3%)
Query: 1 MNNYGLA------IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRR 54
M + GLA IS ALF+Q + VK ++ L + SI +W++II S R
Sbjct: 1 MPDVGLAVGSAAQAATISPLALFLQADIVVKVVMLGLLLASIWTWAMIIGFSFTLRKASR 60
Query: 55 QFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRID 114
Q R FEQ FW + ++ ++ + A + + ++EW++S + G +DR+
Sbjct: 61 QSRAFEQDFWKAEDIDRFYEA-RGKSEFPAARVMAAGVTEWRRSTAQKVIDREGTRDRLS 119
Query: 115 RMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIP 173
M IA E++ ++++L+ L ++ S VG+ G V G+M F SIA ++++ V P
Sbjct: 120 TAMSSTIAAEVDRLSDRLNILATIGSVAPFVGLFGTVWGIMRAFTSIAAEQNSSLAVVAP 179
Query: 174 GIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
GI E+L + +GL +IP+ IAYN+F + + FA+ F + LSR+ E
Sbjct: 180 GIAEALFATAIGLFAAIPAVIAYNRFSHGINRMESGLTRFADNFYSTLSRELEAQ 234
>gi|149927729|ref|ZP_01915981.1| MotA/TolQ/ExbB proton channel [Limnobacter sp. MED105]
gi|149823555|gb|EDM82785.1| MotA/TolQ/ExbB proton channel [Limnobacter sp. MED105]
Length = 219
Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats.
Identities = 72/218 (33%), Positives = 110/218 (50%), Gaps = 4/218 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+S +L + L V+ ++ +L + S++SW+ I +K ++Q +FE+ FWSG L
Sbjct: 1 MSFISLIAEASLVVQLVMLILVMISLISWATIFKKWAVLKRTKQQADKFEEEFWSGGDLN 60
Query: 71 TVCKSLKNHHN--IGLAAIFMSAMSEWKKSCD-KGARSPIGIQDRIDRMMDVAIARELEE 127
T+ + N L IF + MSE+ ++ D KG I D R M A RE E
Sbjct: 61 TLFQRAGMRRNDAGPLERIFEAGMSEFLRARDKKGLTDYSLIIDGARRAMKAAFQRENEI 120
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV-SIPGIIESLISILLGL 186
+ L FL S S +G+ G V G+M F +A + PGI E+LI+ +GL
Sbjct: 121 LERNLPFLASAGSVSPYIGLFGTVWGIMHAFVGLANVQQATLASVAPGIAEALIATAIGL 180
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+IP+ +AYN++ D + + Q E F EF IL RQ
Sbjct: 181 FAAIPAVVAYNRYANDIDRLSTQFESFVEEFLNILQRQ 218
>gi|126737224|ref|ZP_01752959.1| proton transporter TolQ [Roseobacter sp. SK209-2-6]
gi|126721809|gb|EBA18512.1| proton transporter TolQ [Roseobacter sp. SK209-2-6]
Length = 231
Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats.
Identities = 87/219 (39%), Positives = 127/219 (57%), Gaps = 1/219 (0%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
+D S++ LF + L VK ++ +L + SI SW +I QK +N+ R + EF+Q FWSG+
Sbjct: 12 IDFSMWGLFARATLTVKLVMLMLIVASIWSWGIIFQKLINYRLARSEAAEFDQAFWSGEP 71
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
L+ + L + A IF + M+EW++S G Q RIDR MDVAIA+E E++
Sbjct: 72 LDGLFDHLGPEPSGRAARIFAAGMAEWRRSHRSDGGLIPGAQARIDRSMDVAIAKETEDL 131
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
LS L ++ S +G+ G V G+M F IA + N+ V PGI E+L++ LGL
Sbjct: 132 QSGLSILATVGSTAPFIGLFGTVWGIMNAFIEIAEQQNTNLAVVAPGIAEALLATGLGLL 191
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ I YNK DS + E FA+EF+ ILSRQ +
Sbjct: 192 AAIPAVIFYNKLSADSDRILGGYEAFADEFATILSRQLD 230
>gi|254448719|ref|ZP_05062177.1| protein TolQ [gamma proteobacterium HTCC5015]
gi|198261727|gb|EDY86014.1| protein TolQ [gamma proteobacterium HTCC5015]
Length = 239
Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats.
Identities = 68/225 (30%), Positives = 119/225 (52%), Gaps = 4/225 (1%)
Query: 7 AIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG 66
A +SI L + V+ ++ LLF S+ SW VI K + + FE FWSG
Sbjct: 3 AHESLSIVGLIWEASFIVQLVMLLLFAASVTSWWVIYLKVKGYKQANEEADRFEDQFWSG 62
Query: 67 QSLETVCKSLKNH--HNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARE 124
L + ++L+N G+ IF + E+ + G P + + R+M VA++RE
Sbjct: 63 GDLRDIYEALQNRRVPRQGMEHIFEAGYREYARQVRLGVV-PGQVVEAAQRVMRVALSRE 121
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISIL 183
++E+ +LSFL ++ S VG+ G V+G+M F+++ + + PGI E+LI+
Sbjct: 122 IDELETRLSFLATVGSTSPYVGLFGTVVGIMNSFRALGQVQQATLSMVAPGIAEALIATA 181
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
+GL +IP+ +AYN+F ++ ++ + F EF+A++ RQ +
Sbjct: 182 IGLLAAIPAVVAYNRFANQVERLELRYDNFKEEFAALIHRQASAS 226
>gi|152980246|ref|YP_001354154.1| biopolymer transport protein [Janthinobacterium sp. Marseille]
gi|151280323|gb|ABR88733.1| biopolymer transport protein [Janthinobacterium sp. Marseille]
Length = 230
Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats.
Identities = 73/227 (32%), Positives = 114/227 (50%), Gaps = 8/227 (3%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
D+S L + V+ ++ LL S++SW+ I +K R Q EFE+ FWSG
Sbjct: 4 TQDLSFVHLITNASVLVQLVMALLLGVSVMSWTYIFRKMFAIKNARAQTEEFERAFWSGG 63
Query: 68 SLETVCKSLKNHHN------IGLAAIFMSAMSEWKKSCDKGARSPIGIQ-DRIDRMMDVA 120
L T+ ++ L IF + MSE+ K+ + + D R M A
Sbjct: 64 DLNTLYLEASSNRRKNNGSTGALERIFEAGMSEFNKAKGSNDSFHVSARLDGARRAMRAA 123
Query: 121 IARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESL 179
RE++ + L+FL S+ S VG+ G V G+M F+ +A + ++ PGI E+L
Sbjct: 124 YQREMDALESHLAFLASVGSVSPYVGLFGTVWGIMNAFRGLANVQQATLAAVAPGIAEAL 183
Query: 180 ISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
I+ +GL +IP+ +AYN++ D + A++ E F EFS IL RQT
Sbjct: 184 IATAIGLFAAIPAVVAYNRYSHDIDRLAIRFESFVEEFSNILQRQTR 230
>gi|163869134|ref|YP_001610373.1| tolQ protein [Bartonella tribocorum CIP 105476]
gi|161018820|emb|CAK02378.1| tolQ protein [Bartonella tribocorum CIP 105476]
Length = 237
Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats.
Identities = 89/221 (40%), Positives = 143/221 (64%), Gaps = 1/221 (0%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+ + LFMQ L VK ++ LL + S+ SW++I K + +RR+ ++FE+ FWSG++LE
Sbjct: 12 MGMLHLFMQASLVVKVVMVLLLLASVWSWAIIFDKIFTYRRIRREIKQFERTFWSGKALE 71
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
+ S K+ ++A+FM+AM EWKKS +KG + +Q RID+ MD+ + RE E+I
Sbjct: 72 DLYASCKSQRTNSISAVFMAAMVEWKKSLEKGTHTSTSLQSRIDKAMDLTLGRESEKIES 131
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVS 189
KLSFL ++ SAG +G+ G V+G+M F SI+ + ++ + PGI E+L++ +GL +
Sbjct: 132 KLSFLATLGSAGPFIGLFGTVIGIMESFLSISASQNTSLAIVAPGIAEALLATAIGLFAA 191
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
IP+ IAYNK +S + Q+E FA+EFS I+SR+ + +
Sbjct: 192 IPAVIAYNKLTHESARIIAQIENFADEFSTIVSRRIDETRT 232
>gi|291612987|ref|YP_003523144.1| protein TolQ [Sideroxydans lithotrophicus ES-1]
gi|291583099|gb|ADE10757.1| protein TolQ [Sideroxydans lithotrophicus ES-1]
Length = 225
Score = 223 bits (568), Expect = 2e-56, Method: Composition-based stats.
Identities = 65/221 (29%), Positives = 106/221 (47%), Gaps = 4/221 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
I D+S L L V+ ++ LL + S++SW I K + +Q REFE FW
Sbjct: 4 IQDLSFMHLVTNASLLVQLVMGLLLLVSLMSWWYIFLKMFAVRSAVKQAREFEDAFWGNP 63
Query: 68 SLETVCKSLKNHHNI---GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARE 124
+L + + + L IF + +E+ K + D R M RE
Sbjct: 64 NLNALYQQANSQARTDVGALERIFAAGFAEFVKLKKTHGVDGAAVMDGTRRAMRAKYQRE 123
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV-SIPGIIESLISIL 183
++ + LSFL ++ S VG+LG V G+M F+ ++ + PGI E+L++
Sbjct: 124 MDHLESHLSFLATVGSVSPYVGLLGTVWGIMNAFRGLSNVGQATLAQVAPGIAEALVATA 183
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+GL +IP+ +AYN++ D + + + E F EFS +L RQ
Sbjct: 184 MGLFAAIPAVVAYNRYAHDITRLSSRFESFIEEFSNVLQRQ 224
>gi|67458896|ref|YP_246520.1| TolQ protein [Rickettsia felis URRWXCal2]
gi|67004429|gb|AAY61355.1| TolQ protein [Rickettsia felis URRWXCal2]
Length = 242
Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats.
Identities = 75/205 (36%), Positives = 120/205 (58%), Gaps = 3/205 (1%)
Query: 25 KCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGL 84
K ++ +L I SI SW++I+ K ++R+ + FE +FWSG LE + +S+K N L
Sbjct: 34 KSVMLMLLIASIWSWAIILDKIFKLAQVQRRMKNFENVFWSGGVLEQLYESIKRSVNNPL 93
Query: 85 AAIFMSAMSEWKKSCDKGARSPI--GIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAG 142
A IF+SAM E K KG + ++RI M +A RE+E++ + LSFL ++ S+
Sbjct: 94 ALIFVSAMDECKSLNTKGLSDALKNNHKERITGAMYLAQNREVEKLEKNLSFLATVGSSA 153
Query: 143 LLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIE 201
VG+ G V G+M FQSIA + ++ V PGI E+L++ +GL +IP+ I YN I
Sbjct: 154 PFVGLFGTVWGIMHSFQSIATSKNTSLAVVAPGIAEALLATAIGLFAAIPAVIFYNYLIS 213
Query: 202 DSKKFAMQMEGFANEFSAILSRQTE 226
++E F++E ++ILS+ +
Sbjct: 214 RITLINNKIEDFSSELNSILSKAID 238
>gi|109899249|ref|YP_662504.1| MotA/TolQ/ExbB proton channel [Pseudoalteromonas atlantica T6c]
gi|109701530|gb|ABG41450.1| Cell division and transport-associated protein TolQ
[Pseudoalteromonas atlantica T6c]
Length = 236
Score = 222 bits (567), Expect = 3e-56, Method: Composition-based stats.
Identities = 71/218 (32%), Positives = 117/218 (53%), Gaps = 2/218 (0%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
++SIF LF Q L V+ ++ LL S+ SW+ I Q+S + ++FE FWSG L
Sbjct: 4 ELSIFGLFWQASLLVQLVMLLLLAASVASWTFIFQRSQALSRAKNDMKKFEDKFWSGVDL 63
Query: 70 ETVCKSLKNHHNI-GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ + L ++ G+A++F + E+ + + I D R M V+++RE++E+
Sbjct: 64 NRLYQELAARESVQGMASLFCAGFKEFVRLRKSSSTPSEAIMDGTYRAMRVSLSREIDEL 123
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLC 187
+L FL ++ S +G+ G V G+M F ++ + + PGI E+LI+ +GL
Sbjct: 124 ESRLPFLATVGSISPYIGLFGTVWGIMNAFIALGEVQQATLAMVAPGIAEALIATAMGLF 183
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IPS IAYN+F +K F EFS+IL RQ+
Sbjct: 184 AAIPSVIAYNRFSHQVEKLENNYGNFMEEFSSILHRQS 221
>gi|51473504|ref|YP_067261.1| TolQ protein [Rickettsia typhi str. Wilmington]
gi|13235454|emb|CAC33747.1| TolQ protein [Rickettsia typhi]
gi|51459816|gb|AAU03779.1| TolQ protein [Rickettsia typhi str. Wilmington]
Length = 241
Score = 222 bits (567), Expect = 3e-56, Method: Composition-based stats.
Identities = 76/219 (34%), Positives = 123/219 (56%), Gaps = 3/219 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
SI +L K ++ +L I SI SWS+I+ K + ++R+ + FE +FWSG LE
Sbjct: 19 FSILSLIGSSDFIGKSVMLMLLIASIWSWSIILHKIFSLAQVQRRIQSFENVFWSGCVLE 78
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPI--GIQDRIDRMMDVAIARELEEI 128
+ +S+K N LA IF+SAM E KG + ++RI M +A RE+E++
Sbjct: 79 QLYESIKKSVNNPLALIFVSAMDECNSLNTKGFSEALKNNHKERIMSAMYLAQNREIEKL 138
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
+ L+ L ++ S+ VG+ G V G+M FQSIA + ++ V PGI E+L++ +GL
Sbjct: 139 EKYLNVLATVGSSAPFVGLFGTVWGIMHSFQSIALSKNTSLAVVAPGIAEALLATAIGLF 198
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
V+IP+ I YN + ++E F +E ++ILS+ +
Sbjct: 199 VAIPAVIFYNYLMSRITLINNKIEDFISELNSILSKAID 237
>gi|289207748|ref|YP_003459814.1| protein TolQ [Thioalkalivibrio sp. K90mix]
gi|288943379|gb|ADC71078.1| protein TolQ [Thioalkalivibrio sp. K90mix]
Length = 230
Score = 222 bits (566), Expect = 3e-56, Method: Composition-based stats.
Identities = 73/225 (32%), Positives = 123/225 (54%), Gaps = 6/225 (2%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
+D S++ L M+ L V+ ++ +L + S+LSW II K+ + R +FE+ FWSG
Sbjct: 2 AVDFSMYQLVMEATLVVQLVMVILVLASVLSWLAIIVKARSLNAAHRACDDFEERFWSGA 61
Query: 68 SLETVCKSLKNHHN-IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
L + + ++ G+ +F S E+ ++ G + + R M VAIARE++
Sbjct: 62 DLSHLYEGVRRKQEMTGMEHVFSSGFKEFLRARQHGIPAG----EPAQRAMRVAIAREID 117
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLG 185
E+ L FL ++ S +G+ G V G+M F ++G + + PGI E+LI+ LG
Sbjct: 118 EMERYLQFLATVGSTSPYIGLFGTVWGIMHAFLGLSGVQQATLAMVAPGIAEALIATALG 177
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
L +IP+ IAYN+F D + A+++E F +EF A+L+RQ +
Sbjct: 178 LFAAIPAVIAYNRFAGDVDRVAVRLENFNDEFVALLNRQVHAKST 222
>gi|187479382|ref|YP_787407.1| TolQ protein [Bordetella avium 197N]
gi|115423969|emb|CAJ50522.1| TolQ protein [Bordetella avium 197N]
Length = 224
Score = 222 bits (566), Expect = 3e-56, Method: Composition-based stats.
Identities = 70/220 (31%), Positives = 115/220 (52%), Gaps = 4/220 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S+ +L + V+ I+ LL S++SW+ I K + +Q R FE FWSG L
Sbjct: 6 DMSLSSLLFNASVPVQLIMLLLLGISVVSWTYIFAKRMAIKRANQQTRRFEDDFWSGGDL 65
Query: 70 ETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ +++ + + LA IF + M+E+ K+ G S + D R M A RE++
Sbjct: 66 AMLQQAVSSRRDEQGALARIFDAGMTEFLKARRSGGDSS-SLLDGPRRAMRAAYQREMDS 124
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV-SIPGIIESLISILLGL 186
+ L+FL S S +G+LG V G+M F ++ + PGI E+LI+ +GL
Sbjct: 125 LESHLNFLASAGSVSPYIGLLGTVWGIMHAFIGLSNMQQATLASVAPGIAEALIATAIGL 184
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ +AYN+F D + +++ + F +EF IL RQ
Sbjct: 185 FAAIPAVVAYNRFTNDIDRISIRFDSFVDEFLNILQRQVR 224
>gi|332305761|ref|YP_004433612.1| protein TolQ [Glaciecola agarilytica 4H-3-7+YE-5]
gi|332173090|gb|AEE22344.1| protein TolQ [Glaciecola agarilytica 4H-3-7+YE-5]
Length = 236
Score = 222 bits (566), Expect = 4e-56, Method: Composition-based stats.
Identities = 70/218 (32%), Positives = 117/218 (53%), Gaps = 2/218 (0%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
++SIF LF Q L V+ ++ LL S+ SW+ I Q+S + ++FE FWSG L
Sbjct: 4 ELSIFGLFWQASLLVQLVMLLLLAASVASWTFIFQRSQALSRAKSDMKKFEDKFWSGVDL 63
Query: 70 ETVCKSLKNHHNI-GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ + L ++ G+A++F + E+ + + I D R M V+++RE++++
Sbjct: 64 NRLYQELAARESVGGMASLFCAGFKEFVRLRKSSSTPSEAIMDGTYRAMRVSLSREIDDL 123
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLC 187
+L FL ++ S +G+ G V G+M F ++ + + PGI E+LI+ +GL
Sbjct: 124 ESRLPFLATVGSISPYIGLFGTVWGIMNAFIALGEVQQATLAMVAPGIAEALIATAMGLF 183
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IPS IAYN+F +K F EFS+IL RQ+
Sbjct: 184 AAIPSVIAYNRFSHQVEKLENNYGNFMEEFSSILHRQS 221
>gi|294013403|ref|YP_003546863.1| biopolymer transport protein TolQ [Sphingobium japonicum UT26S]
gi|292676733|dbj|BAI98251.1| biopolymer transport protein TolQ [Sphingobium japonicum UT26S]
Length = 239
Score = 221 bits (565), Expect = 4e-56, Method: Composition-based stats.
Identities = 73/235 (31%), Positives = 123/235 (52%), Gaps = 8/235 (3%)
Query: 1 MNNYGLA------IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRR 54
M + GLA IS ALF+Q + VK ++ L + SI +W++II S R
Sbjct: 5 MPDVGLAVGSAAQAATISPLALFLQADIVVKVVMLGLLLASIWTWAMIIGFSFTLRKASR 64
Query: 55 QFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRID 114
Q R FEQ FW + ++ ++ + A + + ++EW++S + G +DR+
Sbjct: 65 QSRAFEQDFWKAEDIDRFYEA-RGKSEFPAARVMAAGVTEWRRSTAQKVIDREGTRDRLS 123
Query: 115 RMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIP 173
M IA E++ ++++L+ L ++ S VG+ G V G+M F SIA ++++ V P
Sbjct: 124 TAMSSTIAAEVDRLSDRLNILATIGSVAPFVGLFGTVWGIMRAFTSIAAEQNSSLAVVAP 183
Query: 174 GIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
GI E+L + +GL +IP+ IAYN+F + + FA+ F + LSR+ E
Sbjct: 184 GIAEALFATAIGLFAAIPAVIAYNRFSHGINRMESGLTRFADGFYSTLSRELEAQ 238
>gi|84687708|ref|ZP_01015581.1| proton transporter TolQ [Maritimibacter alkaliphilus HTCC2654]
gi|84664291|gb|EAQ10782.1| proton transporter TolQ [Rhodobacterales bacterium HTCC2654]
Length = 231
Score = 221 bits (565), Expect = 4e-56, Method: Composition-based stats.
Identities = 88/230 (38%), Positives = 127/230 (55%), Gaps = 4/230 (1%)
Query: 1 MNNYGLAI---MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFR 57
M LA+ MD S +ALF + L VK ++ LL S SW++I+ K + F + +
Sbjct: 1 MEQDALALAGEMDFSFWALFFRATLIVKLVMVLLVAMSFYSWAIIVTKFMQFRRAKAEAA 60
Query: 58 EFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMM 117
F+Q FWSG+ L+ + + + +F + M EW++S G Q RIDR M
Sbjct: 61 MFDQAFWSGEPLDELYEQIGPSPTGSSEKVFAAGMLEWRRSHRADGGLIAGAQSRIDRSM 120
Query: 118 DVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGII 176
DVAIA+E E + +L FL + +S+ +G+ G V G+M F IA + N+ V PGI
Sbjct: 121 DVAIAKEAEGLNARLGFLATTASSAPFIGLFGTVWGIMHAFTEIAQQQNTNLAVVAPGIA 180
Query: 177 ESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
E+L++ LGL +IP+ I YNK DS A E FA+EFS ILSRQ +
Sbjct: 181 EALLATGLGLLAAIPALIFYNKLTADSDNVAAGWESFADEFSTILSRQLD 230
>gi|126733596|ref|ZP_01749343.1| proton transporter TolQ [Roseobacter sp. CCS2]
gi|126716462|gb|EBA13326.1| proton transporter TolQ [Roseobacter sp. CCS2]
Length = 224
Score = 221 bits (565), Expect = 5e-56, Method: Composition-based stats.
Identities = 79/221 (35%), Positives = 123/221 (55%), Gaps = 1/221 (0%)
Query: 7 AIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG 66
A + +++ALF + + VK ++ +L S+ W+VII K++ + R + F++ FWSG
Sbjct: 3 AAQEFTMWALFARATITVKIVMIMLVAASVWCWAVIIDKTIQYRKARAEADVFDRSFWSG 62
Query: 67 QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
+ L+ + + + IF S M EW++S + G RIDR MDVAIA++
Sbjct: 63 EPLDALFDQIGADPDGQSEKIFASGMLEWRRSHRQDGGLIAGATARIDRSMDVAIAKQAS 122
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLG 185
+ + L L ++ S VG+ G V G+M F IA + N+ V PGI E+L++ LG
Sbjct: 123 SLQKGLPILATVGSTAPFVGLFGTVWGIMNAFIEIAEAQTTNLAVVAPGIAEALLATGLG 182
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
L +IP+ I YNKF DS + E FA+EF+ ILSRQ +
Sbjct: 183 LLAAIPAVIYYNKFSADSDQIVSGYEAFADEFATILSRQLD 223
>gi|84516655|ref|ZP_01004014.1| proton transporter TolQ [Loktanella vestfoldensis SKA53]
gi|84509691|gb|EAQ06149.1| proton transporter TolQ [Loktanella vestfoldensis SKA53]
Length = 224
Score = 221 bits (564), Expect = 5e-56, Method: Composition-based stats.
Identities = 76/220 (34%), Positives = 124/220 (56%), Gaps = 1/220 (0%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
+ +++ALF + + VK ++ +L + SI W++I+ K++ + R + F++ FWSG+
Sbjct: 4 AHEFTMWALFARATIIVKLVMIMLILASIWCWAIIVDKTIQYRRARTEAEIFDRAFWSGE 63
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
L+ + + + IF + M EW++S + G RIDR MDVAIA+E
Sbjct: 64 PLDQLFDQIGPDPDGASEKIFAAGMLEWRRSHRQDGGLIAGATARIDRSMDVAIAKETAR 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
+ + L+ L ++ S VG+ G V G+M F IA + N+ V PGI E+L++ LGL
Sbjct: 124 LQKSLAVLATVGSTAPFVGLFGTVWGIMNAFIEIAEAQNTNLAVVAPGIAEALLATGLGL 183
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ I YNK DS++ E FA+EF+ ILSRQ +
Sbjct: 184 LAAIPAVIYYNKLSADSERIVAGYEAFADEFATILSRQLD 223
>gi|323163896|gb|EFZ49706.1| protein TolQ [Shigella sonnei 53G]
gi|323170858|gb|EFZ56508.1| protein TolQ [Escherichia coli LT-68]
gi|332768164|gb|EGJ98349.1| protein TolQ [Shigella flexneri 2930-71]
Length = 222
Score = 221 bits (564), Expect = 5e-56, Method: Composition-based stats.
Identities = 66/213 (30%), Positives = 111/213 (52%), Gaps = 3/213 (1%)
Query: 16 LFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKS 75
+F++ L VK I+ +L FSI SW++IIQ++ R+ FE FWSG L + +
Sbjct: 1 MFLKASLLVKLIMLILIGFSIASWAIIIQRTRILNAAAREAEAFEDKFWSGIELSRLYQE 60
Query: 76 LKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLS 133
+ + G IF S E+ + + +P + + R M +++ RELE + +
Sbjct: 61 SQGKRDNLTGSEQIFYSGFKEFVRLHRANSHAPEAVVEGASRAMRISMNRELENLETHIP 120
Query: 134 FLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPS 192
FLG++ S +G+ G V G+M F ++ + + PGI E+LI+ +GL +IP+
Sbjct: 121 FLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMVAPGIAEALIATAIGLFAAIPA 180
Query: 193 SIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+AYN+ + K + + F EF+AIL RQ
Sbjct: 181 VMAYNRLNQRVNKLELNYDNFMEEFTAILHRQA 213
>gi|117923785|ref|YP_864402.1| MotA/TolQ/ExbB proton channel [Magnetococcus sp. MC-1]
gi|117607541|gb|ABK42996.1| Cell division and transport-associated protein TolQ [Magnetococcus
sp. MC-1]
Length = 230
Score = 221 bits (564), Expect = 6e-56, Method: Composition-based stats.
Identities = 68/219 (31%), Positives = 116/219 (52%), Gaps = 5/219 (2%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLET 71
S+F L Q G V+ ++ L S++SW++I K + + + FE+ FWSG S+ +
Sbjct: 5 SVFDLITQAGPLVQLVMLALLAASVVSWAIIFDKWRRYRRITQDAEAFEERFWSGGSVAS 64
Query: 72 VCKSL-KNHHNIGLAAIFMSAMSEWKKSCDK---GARSPIGIQDRIDRMMDVAIARELEE 127
+ +S K + + +F + EWK+ + + R M VA+ RELE
Sbjct: 65 LFQSATKEWPDSPMVVMFSAGFREWKRWESNEPTSEGDGGDLVTNVRRAMTVALNRELEN 124
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
+ + L+FL ++ S VG+ G V G+M F + G ++ + + PGI E+LI+ +GL
Sbjct: 125 LEKGLTFLATVGSTSPFVGLFGTVWGIMNAFLGLTGAKASTLTMVAPGIAEALIATAMGL 184
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IPS IAYNK+ + ++ +M+ F EF IL R++
Sbjct: 185 VAAIPSVIAYNKYSSEMRRLHAKMDNFGAEFLNILERRS 223
>gi|94496184|ref|ZP_01302762.1| MotA/TolQ/ExbB proton channel [Sphingomonas sp. SKA58]
gi|94424363|gb|EAT09386.1| MotA/TolQ/ExbB proton channel [Sphingomonas sp. SKA58]
Length = 234
Score = 221 bits (564), Expect = 6e-56, Method: Composition-based stats.
Identities = 68/219 (31%), Positives = 121/219 (55%), Gaps = 2/219 (0%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
IS ALF+Q + VK ++ L + SI +W++II SV ++ R+FE FW + ++
Sbjct: 16 ISPLALFLQADIVVKGVMIGLLLASIWTWAMIIGFSVTLRKASKESRKFEADFWKAEDID 75
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
++ + + A + + ++EW++S + G +DR+ +M IA E++ +++
Sbjct: 76 RFYEA-RGKGSFPAAKVMAAGVTEWRRSTAQKVIDREGTRDRLSTVMSSTIASEVDRLSD 134
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVS 189
+L+ L ++ S VG+ G V G+M F SIA ++++ V PGI E+L + +GL +
Sbjct: 135 RLNILATIGSVAPFVGLFGTVWGIMRAFTSIAAEQNSSLAVVAPGIAEALFATAIGLFAA 194
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
IP+ IAYN+F + M FA+ F + LSR+ E
Sbjct: 195 IPAVIAYNRFSHGINRLEAAMTRFADGFYSTLSRELEAQ 233
>gi|119472452|ref|ZP_01614551.1| inner membrane protein [Alteromonadales bacterium TW-7]
gi|119444889|gb|EAW26188.1| inner membrane protein [Alteromonadales bacterium TW-7]
Length = 234
Score = 221 bits (563), Expect = 7e-56, Method: Composition-based stats.
Identities = 64/222 (28%), Positives = 112/222 (50%), Gaps = 3/222 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
++ L ++ L V+ ++ L S++SW++I Q+ ++FEQ FWSG L
Sbjct: 5 LNFLDLILEASLLVQLVMLGLVAMSVMSWAIIFQRKKAISDALSNAKKFEQKFWSGIDLS 64
Query: 71 TVCKSLKNHH--NIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ + + + G+ A+F + E+ + + + + R M VA++RE+E+I
Sbjct: 65 KLYNEISSRSAQSHGIEALFTAGFKEFARHKKNTFQGASIVMEGTHRSMRVALSREIEKI 124
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
+ LSFL ++ S +G+ G V G+M F ++ + + PGI E+LI+ +GL
Sbjct: 125 EKSLSFLATVGSISPYIGLFGTVWGIMNAFIALGEVKQATLQMVAPGIAEALIATAMGLF 184
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNI 229
+IP+ IAYN+F +K F EF+ IL RQ I
Sbjct: 185 AAIPAVIAYNRFSNSVEKLESHYINFMEEFANILHRQAATQI 226
>gi|90408533|ref|ZP_01216690.1| tol protein, membrane-spanning inner membrane protein, required for
outer membrane integrity, uptake of group A
[Psychromonas sp. CNPT3]
gi|90310352|gb|EAS38480.1| tol protein, membrane-spanning inner membrane protein, required for
outer membrane integrity, uptake of group A
[Psychromonas sp. CNPT3]
Length = 227
Score = 221 bits (563), Expect = 7e-56, Method: Composition-based stats.
Identities = 63/219 (28%), Positives = 105/219 (47%), Gaps = 3/219 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
++S LF+Q L VK ++ LL S+ SW++I +S FE+ FWSG L
Sbjct: 4 EMSFLGLFLQASLLVKFVMLLLLAMSVYSWTIIFSRSRVLKAAHEALEHFEKRFWSGHDL 63
Query: 70 ETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + G IF E+ + R+ + + R M V ++RE+EE
Sbjct: 64 SRLYQETAARSERIGGGEKIFFQGFKEFSRLHTMPGRNVDSVTEGAHRSMRVVLSREVEE 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
+ E LS L ++ S +G+ G V G+M F ++ ++ + PGI E+LI+ +GL
Sbjct: 124 LEEGLSALATIGSISPYIGLFGTVWGIMNAFMALGQVQQASLNMVAPGIAEALIATAMGL 183
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ +AYN++ + EF++IL RQ
Sbjct: 184 FAAIPAVMAYNRYTAKMMRLETAYINLMEEFTSILHRQA 222
>gi|88810555|ref|ZP_01125812.1| MotA/TolQ/ExbB proton channel [Nitrococcus mobilis Nb-231]
gi|88792185|gb|EAR23295.1| MotA/TolQ/ExbB proton channel [Nitrococcus mobilis Nb-231]
Length = 234
Score = 221 bits (563), Expect = 7e-56, Method: Composition-based stats.
Identities = 63/220 (28%), Positives = 111/220 (50%), Gaps = 4/220 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+SI L + L V+ ++ +L SI SW++I +K + FE FWSG +L
Sbjct: 4 DLSIAGLVLNASLIVQFVLLILLGASISSWTLIFRKWQTIGQAQSGANAFEDRFWSGGNL 63
Query: 70 ETVCKSLKNHH--NIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + H GL IF + E+ + +G+ +P + D R M V++ RE++
Sbjct: 64 AEIYAQVSQPHEQAGGLERIFRAGFREFTRMRKQGS-NPESVVDASHRAMRVSLQREIDI 122
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ + FL ++ S +G+ G V G+M F ++ + ++ PGI E+L++ +GL
Sbjct: 123 LESYVPFLATVGSTSPYIGLFGTVWGIMNAFLALGNMQQATLTTVAPGIAEALVATAMGL 182
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ IAYN++ ++ E F EF++IL R
Sbjct: 183 FAAIPAVIAYNRYASQIERLTNHYEIFMEEFASILQRHVH 222
>gi|332525522|ref|ZP_08401679.1| transmembrane protein/ biopolymer transport [Rubrivivax
benzoatilyticus JA2]
gi|332109089|gb|EGJ10012.1| transmembrane protein/ biopolymer transport [Rubrivivax
benzoatilyticus JA2]
Length = 227
Score = 221 bits (563), Expect = 7e-56, Method: Composition-based stats.
Identities = 76/221 (34%), Positives = 116/221 (52%), Gaps = 3/221 (1%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
D+SI +L +Q V+ ++ L + S+ SW+VI K T+R + FE+ FWSG+S
Sbjct: 3 QDLSIVSLVLQASAVVQLVMAGLALVSLASWTVIFGKLFGLRTVRSRNEAFEREFWSGRS 62
Query: 69 LETVCKSLKNHHN-IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
L + ++ N + + IF S M E+ K ++ D R M + REL+
Sbjct: 63 LTELNQAASNKADAAPIERIFASGMREFLKLRERRL-DAGAQLDGARRAMRASFQRELDA 121
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
I LSFL S+ S VG+ G V G+M F ++ + ++ PGI E+L++ +GL
Sbjct: 122 IESHLSFLASVGSVSPYVGLFGTVWGIMHAFVGLSNLQQVTLATVAPGIAEALVATAIGL 181
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEG 227
+IP+ IAYN+F D + A+Q E F EFS IL R G
Sbjct: 182 FAAIPAVIAYNRFARDIDRIAIQFETFIEEFSNILQRNASG 222
>gi|209695362|ref|YP_002263291.1| TolQ protein, inner membrane component [Aliivibrio salmonicida
LFI1238]
gi|208009314|emb|CAQ79580.1| TolQ protein, inner membrane component [Aliivibrio salmonicida
LFI1238]
Length = 228
Score = 221 bits (563), Expect = 8e-56, Method: Composition-based stats.
Identities = 65/219 (29%), Positives = 109/219 (49%), Gaps = 3/219 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
++SI LF+ L VK ++ +L S++SW++I ++S FE FWSG L
Sbjct: 4 ELSILDLFLHASLLVKIVMLILLSLSVMSWAMIFKRSKVLAVAHTDAERFESKFWSGMDL 63
Query: 70 ETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ +K + G IF S +E+ + + S + D R M V ++RE+++
Sbjct: 64 AQLFNEVKVRKDRISGTEKIFYSGFNEFARLSRVNSSSSEAVMDGTIRSMRVTVSREVDD 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ L FL ++ S +G+ G V G+M F ++ + + PGI E+L++ +GL
Sbjct: 124 LETNLPFLATVGSITPYIGLFGTVWGIMHSFIALGAVKQATLAMVAPGIAEALVATAMGL 183
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ IAYN+ K F +EFS+IL RQ
Sbjct: 184 FAAIPAVIAYNQLSVKVGKLEHNYAAFMDEFSSILHRQA 222
>gi|237746668|ref|ZP_04577148.1| TolQ protein [Oxalobacter formigenes HOxBLS]
gi|229378019|gb|EEO28110.1| TolQ protein [Oxalobacter formigenes HOxBLS]
Length = 229
Score = 221 bits (563), Expect = 8e-56, Method: Composition-based stats.
Identities = 72/223 (32%), Positives = 120/223 (53%), Gaps = 6/223 (2%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
D+S +L L V+ I+ LL + S++SW+ I QK R + FE FWSG +
Sbjct: 7 QDLSFISLIANASLLVQLIMALLVVVSLMSWTFIFQKMFAIKNARVETENFEHAFWSGGN 66
Query: 69 LETVCKSLKNHHNIG-LAAIFMSAMSEWKKSCD----KGARSPIGIQDRIDRMMDVAIAR 123
L+++ + N++ G L IF + M E+ K + + + + D R M A R
Sbjct: 67 LQSLYQRAGNNNRTGALERIFYAGMGEYLKGKNAMTPHSTQDAVALLDGARRAMRAAYQR 126
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISI 182
E++ + L+FL S+ S VG+ G V G+M F+ +A + + ++ PGI E+LI+
Sbjct: 127 EMDSLESHLAFLASVGSVSPYVGLFGTVWGIMNAFRGLANVHQATLATVAPGIAEALIAT 186
Query: 183 LLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+GL +IP+ +AYN++ D + +++ E F EFS IL RQ+
Sbjct: 187 AIGLFAAIPAVVAYNRYSHDIDRLSIRFETFIEEFSNILQRQS 229
>gi|88705608|ref|ZP_01103318.1| MotA/TolQ/ExbB proton channel [Congregibacter litoralis KT71]
gi|88700121|gb|EAQ97230.1| MotA/TolQ/ExbB proton channel [Congregibacter litoralis KT71]
Length = 230
Score = 220 bits (562), Expect = 1e-55, Method: Composition-based stats.
Identities = 64/218 (29%), Positives = 109/218 (50%), Gaps = 6/218 (2%)
Query: 14 FALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVC 73
L M G+ VK ++ LL S+ SW +I Q+ F + + +FE+ FWSG L +
Sbjct: 1 MDLVMDAGVTVKLVMALLMAASVTSWYMIFQRFFYFRSAGEEMLDFEEHFWSGVDLAQLY 60
Query: 74 KSLKNHHN-----IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ IG+ +F + E+ + + + + R M VA+ RE E +
Sbjct: 61 REGNERAADGEIIIGVEGVFRAGFKEFSRLAQQSDMDAEAMLEGARRAMRVAMLREEERL 120
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLC 187
+ L FL ++ S VG+ G V G+M F+ +A + ++ PGI E+L++ +GL
Sbjct: 121 EKHLPFLATVGSTSPYVGLFGTVWGIMNSFRGLANTSQATLATVAPGISEALVATAMGLF 180
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ +AYN+F + + + F +EFS+IL RQ
Sbjct: 181 AAIPAVMAYNRFASKVDVYGKRYDTFVDEFSSILGRQA 218
>gi|297539679|ref|YP_003675448.1| protein TolQ [Methylotenera sp. 301]
gi|297259026|gb|ADI30871.1| protein TolQ [Methylotenera sp. 301]
Length = 226
Score = 220 bits (562), Expect = 1e-55, Method: Composition-based stats.
Identities = 65/222 (29%), Positives = 110/222 (49%), Gaps = 3/222 (1%)
Query: 7 AIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG 66
A D+SIF+L L V+ ++ +L S+ SW I K +FE+ FWSG
Sbjct: 5 AANDMSIFSLVAGASLPVQMVLLVLIGTSLFSWWYIFIKLATIKKAETNAEDFEKAFWSG 64
Query: 67 QSLETVCKSLKN--HHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARE 124
L + + L + G+A+IF + E+ + + + + R M A RE
Sbjct: 65 GDLNKLFEGLASSRRKPQGMASIFEAGFREYVRHKQQTTMDVSDVMEGSRRAMRAAYNRE 124
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISIL 183
L+++ L FL S+ S +G+ G V G+M F+ ++ + PGI E+L++
Sbjct: 125 LDDLDAHLPFLASVGSVSPYIGLFGTVWGIMNAFRGLSNVAQATLSQVAPGIAEALVATA 184
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+GL +IP+ IAYN+F + +++ E F EF+ IL R++
Sbjct: 185 IGLFAAIPAVIAYNRFASSVDRLSVRYESFMEEFTNILQRKS 226
>gi|292490338|ref|YP_003525777.1| protein TolQ [Nitrosococcus halophilus Nc4]
gi|291578933|gb|ADE13390.1| protein TolQ [Nitrosococcus halophilus Nc4]
Length = 225
Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats.
Identities = 64/222 (28%), Positives = 114/222 (51%), Gaps = 3/222 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
+D+S+F L V+ ++ +L + S+++W++I +K + EFE FWSG+
Sbjct: 2 AVDLSLFELVTGASFLVQLVMLILLVISVIAWTLIFRKRSELKGAKEAADEFEDRFWSGK 61
Query: 68 SLETVCKSLKNH--HNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
L ++ L G+ IF S E+ + + + D R M V++ARE+
Sbjct: 62 ELNSLYAELAAREIPLHGMEGIFFSGFREFVRLRKQTNAEHRAVLDGTQRAMRVSLAREI 121
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILL 184
+ + L FL + S +G+ G V G+M F+++ + + + PGI E+LI+ +
Sbjct: 122 DTLEAALPFLATAGSTSPYIGLFGTVWGIMNSFRALGNAHQATLAMVAPGIAEALIATAM 181
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
GL +IP+ IAYN++I + ++ + + F EFS IL RQ
Sbjct: 182 GLFAAIPAVIAYNRYIHEVERLINRYDTFLEEFSTILQRQLH 223
>gi|332534225|ref|ZP_08410070.1| inner membrane protein required for outer membrane integrity,
uptake of group A colicins and phage DNA
[Pseudoalteromonas haloplanktis ANT/505]
gi|332036305|gb|EGI72776.1| inner membrane protein required for outer membrane integrity,
uptake of group A colicins and phage DNA
[Pseudoalteromonas haloplanktis ANT/505]
Length = 234
Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats.
Identities = 65/222 (29%), Positives = 112/222 (50%), Gaps = 3/222 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
++ L ++ L V+ ++ L S++SW++I Q+ ++FEQ FWSG L
Sbjct: 5 LNFLDLILEASLLVQLVMLGLVAMSVMSWTIIFQRKKAISDALINAKKFEQKFWSGIDLS 64
Query: 71 TVCKSLKNHH--NIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ + + + G+ A+F S E+ + +S + + R M VA++RE+E++
Sbjct: 65 KLYNEISSRSGQSQGIEALFTSGFKEFARHKKNTFQSASIVMEGTHRSMRVALSREIEKM 124
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
LSFL ++ S +G+ G V G+M F ++ + + PGI E+LI+ +GL
Sbjct: 125 ESSLSFLATVGSISPYIGLFGTVWGIMNAFIALGEVKQATLQMVAPGIAEALIATAMGLF 184
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNI 229
+IP+ IAYN+F +K F EF+ IL RQ I
Sbjct: 185 AAIPAVIAYNRFSNSVEKLESHYINFMEEFANILHRQAATQI 226
>gi|114776331|ref|ZP_01451376.1| MotA/TolQ/ExbB proton channel family protein [Mariprofundus
ferrooxydans PV-1]
gi|114553161|gb|EAU55559.1| MotA/TolQ/ExbB proton channel family protein [Mariprofundus
ferrooxydans PV-1]
Length = 229
Score = 220 bits (560), Expect = 1e-55, Method: Composition-based stats.
Identities = 70/226 (30%), Positives = 123/226 (54%), Gaps = 8/226 (3%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
D+SI L + G+ V+ ++ +L + S++SW++I K + RR+ F Q FW G
Sbjct: 3 QDLSILHLILNAGVIVQGVLIMLIMLSLMSWAIIFNKWRLYRKTRREAELFSQSFWGGTD 62
Query: 69 LETVCKSL-KNHHNIGLAAIFMSAMSEWKKSCDKGARSPI------GIQDRIDRMMDVAI 121
++TV + + + + L IF + E+ + ++S G D + R +D A
Sbjct: 63 MDTVLAGIPQQYPDSSLPNIFQAGYREFLRLRRDASQSHTAKITAGGGIDGVRRSLDAAF 122
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV-SIPGIIESLI 180
+RE+E+++ L+FL ++ S +G+ G V G++ FQSIA + + PGI E+L+
Sbjct: 123 SREIEKLSRHLAFLATVGSTSPFIGLFGTVWGIVNAFQSIAMTKNTALTSVAPGIAEALV 182
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+ GL +IP+ +AYNKF D K+ ME F++EF I++R +
Sbjct: 183 ATAFGLVAAIPAVVAYNKFTADLKRMGANMEQFSSEFLNIIARHVK 228
>gi|254000103|ref|YP_003052166.1| protein TolQ [Methylovorus sp. SIP3-4]
gi|313202062|ref|YP_004040720.1| protein tolq [Methylovorus sp. MP688]
gi|253986782|gb|ACT51639.1| protein TolQ [Methylovorus sp. SIP3-4]
gi|312441378|gb|ADQ85484.1| protein TolQ [Methylovorus sp. MP688]
Length = 224
Score = 220 bits (560), Expect = 1e-55, Method: Composition-based stats.
Identities = 62/218 (28%), Positives = 107/218 (49%), Gaps = 3/218 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S++ L + V+ ++ +L + S++SW I K + + R FE+ FW G L
Sbjct: 6 DMSLYTLIAGASVPVQIVMAILLLTSLVSWWYIFIKVFSIRSAERDALAFEEEFWRGGDL 65
Query: 70 ETVCKS--LKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ S G+A+IF + E+ K +G + R M + RE+++
Sbjct: 66 NKLYDSVNAGRRRAQGMASIFEAGFKEYAKLKRQGGLEISDVTQSAQRAMRASYNREMDD 125
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV-SIPGIIESLISILLGL 186
+ L FL S+ S +G+ G V G+M F+ ++ + PGI E+L++ +GL
Sbjct: 126 LDSHLPFLASVGSVSPYIGLFGTVWGIMNAFRGLSNMAQATLSHVAPGIAEALVATAIGL 185
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+IP+ IAYN+F + A++ E F EF+ IL R
Sbjct: 186 FAAIPAVIAYNRFASAVDRLAVRYESFMEEFTNILQRN 223
>gi|317402477|gb|EFV83045.1| TolQ colicin import protein [Achromobacter xylosoxidans C54]
Length = 226
Score = 220 bits (560), Expect = 2e-55, Method: Composition-based stats.
Identities = 70/224 (31%), Positives = 114/224 (50%), Gaps = 4/224 (1%)
Query: 7 AIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG 66
A D+S+ +L + V+ I+ +L SI+SW+ I K + Q R FE FWSG
Sbjct: 3 ATNDMSLLSLISHASVPVQLIMLMLLGISIMSWTYIFAKRLAIKRAHAQTRRFEDDFWSG 62
Query: 67 QSLETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGAR-SPIGIQDRIDRMMDVAIAR 123
L + +++ + + LA IF + M+E+ K+ A + D R M A R
Sbjct: 63 GDLSMLQQAVASRRDEQGALARIFDAGMTEFLKARRGNASNDATAVLDGPRRAMRAAYQR 122
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV-SIPGIIESLISI 182
E++ + L+FL S S +G+LG V G+M F ++ + PGI E+LI+
Sbjct: 123 EMDALESHLNFLASAGSVSPYIGLLGTVWGIMHAFIGLSNMQQATLASVAPGIAEALIAT 182
Query: 183 LLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+GL +IP+ +AYN+F D + +++ + F +EF IL RQ
Sbjct: 183 AIGLFAAIPAVVAYNRFTNDIDRISIRFDSFVDEFLNILQRQVR 226
>gi|148262289|ref|YP_001228995.1| MotA/TolQ/ExbB proton channel [Geobacter uraniireducens Rf4]
gi|146395789|gb|ABQ24422.1| Cell division and transport-associated protein TolQ [Geobacter
uraniireducens Rf4]
Length = 224
Score = 220 bits (560), Expect = 2e-55, Method: Composition-based stats.
Identities = 63/224 (28%), Positives = 105/224 (46%), Gaps = 9/224 (4%)
Query: 14 FALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVC 73
+F GL VK ++ +L FS++SW++I K + + F + FW + + +
Sbjct: 1 MEIFATTGLVVKLVLFILLYFSVVSWAIIFYKLLQVHRANSESERFLEFFWKAKRFDAIN 60
Query: 74 KSLKNHHNIGLAAIFMSAMSEWKKSCDKG--------ARSPIGIQDRIDRMMDVAIAREL 125
L N L +F E KK +KG + +G D I R + A E+
Sbjct: 61 AQLDRFANSPLTVLFNEGYGEMKKLMEKGEEKQDPTIISTELGGIDNISRALRRATTSEI 120
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILL 184
+ + L+FL + S +G+ G V G+M F+ I S ++ V PGI E+LI+ +
Sbjct: 121 TRLEKYLTFLATTGSTAPFIGLFGTVWGIMTAFKGIGETGSASLAVVAPGIAEALIATAI 180
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
GL +IP+ + YN F + + +M+ F+ EF I+ R G
Sbjct: 181 GLVAAIPAVMGYNHFQQKIRVLIAEMDSFSTEFLNIVQRTFTGK 224
>gi|262394687|ref|YP_003286541.1| MotA/TolQ/ExbB proton channel family protein [Vibrio sp. Ex25]
gi|262338281|gb|ACY52076.1| MotA/TolQ/ExbB proton channel family protein [Vibrio sp. Ex25]
Length = 211
Score = 220 bits (560), Expect = 2e-55, Method: Composition-based stats.
Identities = 62/201 (30%), Positives = 102/201 (50%), Gaps = 3/201 (1%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNI--GLA 85
+ L SI+SW++II++S + +FE FWSG L + + +K + G
Sbjct: 1 MLTLLGMSIVSWAMIIKRSKVLSQASKNAEQFEDKFWSGTDLSQLYQKVKARKDEIEGTE 60
Query: 86 AIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLV 145
IF + +E+ + A SP I + R M VA++RE++E+ L FL ++ S +
Sbjct: 61 EIFYAGFTEFARLRKSNANSPAYIMEGTGRAMRVAVSREVDELETSLPFLATVGSISPYI 120
Query: 146 GILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSK 204
G+ G V G+M F ++ + + PGI E+LI+ +GL +IP+ +AYN+
Sbjct: 121 GLFGTVWGIMHAFIALGEVKQATLSMVAPGIAEALIATAMGLFAAIPAVMAYNRLSNKVS 180
Query: 205 KFAMQMEGFANEFSAILSRQT 225
K F+ EF +IL RQ
Sbjct: 181 KLEHTYATFSEEFHSILHRQA 201
>gi|56476925|ref|YP_158514.1| TOLQ-related transport transmembrane protein [Aromatoleum
aromaticum EbN1]
gi|56312968|emb|CAI07613.1| TOLQ-related transport transmembrane protein [Aromatoleum
aromaticum EbN1]
Length = 224
Score = 220 bits (560), Expect = 2e-55, Method: Composition-based stats.
Identities = 71/220 (32%), Positives = 114/220 (51%), Gaps = 4/220 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
++SI +L Q + V+ ++TLL S++SW I +KS + R + FE+ FWSG L
Sbjct: 6 NLSIISLVSQASVLVQLVMTLLATLSLVSWYWIFRKSFQIRSARNKTNGFERDFWSGGDL 65
Query: 70 ETVCK--SLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + + H G+ IF S E+ K K + D R M RE+++
Sbjct: 66 NGLFQSAAAARHQTGGMERIFESGYREFTKLRAK-SHDHAATIDGARRAMRATYQREMDD 124
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV-SIPGIIESLISILLGL 186
+ L+FL S+ S +G+LG V G+M F+ ++ S + PGI E+L++ +GL
Sbjct: 125 LEAHLAFLASVGSVSPYIGLLGTVWGIMNAFRGLSNVSSATLAQVAPGIAEALVATAIGL 184
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ +AYN+F D + ++ E F EFS IL RQ
Sbjct: 185 FAAIPAVVAYNRFAHDIDRVGIRFESFMEEFSNILQRQLR 224
>gi|254463470|ref|ZP_05076886.1| protein TolQ [Rhodobacterales bacterium HTCC2083]
gi|206680059|gb|EDZ44546.1| protein TolQ [Rhodobacteraceae bacterium HTCC2083]
Length = 231
Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats.
Identities = 90/230 (39%), Positives = 136/230 (59%), Gaps = 4/230 (1%)
Query: 1 MNNYGLAI---MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFR 57
M LA+ +D S++ALF++ + VK ++ +L + SI +WS+++QK + + T R +
Sbjct: 1 MEAETLAMAQEIDFSMWALFVRATITVKLVMIMLIVASIWAWSIVVQKYMQYRTARSEQA 60
Query: 58 EFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMM 117
EF+Q FWSG+ L+ + + + N IF + M+EW++S G Q RIDR M
Sbjct: 61 EFDQAFWSGEPLDQLFEQIGAQPNGASEKIFAAGMTEWRRSHRVDGGLIAGAQSRIDRSM 120
Query: 118 DVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGII 176
DVAI++E EE+ LS L ++ S VG+ G V G+M F IA + N+ V PGI
Sbjct: 121 DVAISKEAEELQSGLSVLATVGSTAPFVGLFGTVWGIMNAFIEIAEAQNTNLAVVAPGIA 180
Query: 177 ESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
E+L++ LGL +IP+ I YNKF DS + E FA+EF+ ILSRQ +
Sbjct: 181 EALLATGLGLLAAIPAVIYYNKFSADSDRIVGGYEAFADEFATILSRQLD 230
>gi|73540496|ref|YP_295016.1| MotA/TolQ/ExbB proton channel [Ralstonia eutropha JMP134]
gi|72117909|gb|AAZ60172.1| MotA/TolQ/ExbB proton channel [Ralstonia eutropha JMP134]
Length = 227
Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats.
Identities = 72/229 (31%), Positives = 119/229 (51%), Gaps = 5/229 (2%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
MN + D+SI +L + L + ++ LL + S+ SW+ I +K + + R Q FE
Sbjct: 1 MNPVTV-TQDLSIISLVLHASLLAQAVMALLLVMSLFSWTYIFRKHLALRSARTQTEGFE 59
Query: 61 QLFWSGQSLETVCKSL--KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMD 118
+ FW+G L+ + S H+ L IF S M E+ K+ ++G + + D R M
Sbjct: 60 RDFWAGGDLQALYNSAVNNRHNTGALERIFESGMGEFLKARERGNEAS-ALLDAARRAMR 118
Query: 119 VAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV-SIPGIIE 177
A RE++ + L FL S+ S +G+ G V G+M F+ ++ + PGI E
Sbjct: 119 AAYQREMDVLESHLPFLASVGSVSPYIGLFGTVWGIMNAFRGLSNVQQATLASVAPGIAE 178
Query: 178 SLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+L++ +GL +IP+ IAYN++ + + A++ E F EF IL RQT
Sbjct: 179 ALVATAIGLFAAIPAVIAYNRYATEIDRLAIRFESFMEEFLNILQRQTR 227
>gi|329893682|ref|ZP_08269816.1| MotA/TolQ/ExbB proton channel family protein [gamma proteobacterium
IMCC3088]
gi|328923609|gb|EGG30921.1| MotA/TolQ/ExbB proton channel family protein [gamma proteobacterium
IMCC3088]
Length = 236
Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats.
Identities = 63/221 (28%), Positives = 114/221 (51%), Gaps = 6/221 (2%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+S+ L ++ L V+ ++ +L + SI SW +I+++ + F + +FE FWSG L
Sbjct: 5 LSLLDLVLEASLTVQAVMAMLVLASITSWFMIVKRGLYFQRAKSAMLDFEDAFWSGSDLS 64
Query: 71 TVCKSLKNHHNIG-----LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
++ K G + ++F + E+ + + I + R M VA+ RE
Sbjct: 65 SLYKDGSERAANGELILGMESLFRAGFKEFSRLAQQPEMDADAILEGARRAMRVAMLREE 124
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILL 184
E + + LSFL S+ S +G+ G V G+M F+ +A + ++ PGI E+L++ +
Sbjct: 125 ERLEQNLSFLASVGSTSPYIGLFGTVWGIMHSFRGLASSSQATLATVAPGISEALVATAM 184
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
GL +IP+ +AYN++ F + + F +EFS +L RQ
Sbjct: 185 GLFAAIPAVLAYNRYTARVDVFVNRYDTFMDEFSGLLYRQA 225
>gi|226945716|ref|YP_002800789.1| TolQ proton channel [Azotobacter vinelandii DJ]
gi|226720643|gb|ACO79814.1| TolQ proton channel [Azotobacter vinelandii DJ]
Length = 231
Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats.
Identities = 70/223 (31%), Positives = 115/223 (51%), Gaps = 3/223 (1%)
Query: 7 AIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG 66
A+ +S+++L L V+ ++ +L S+ SW +I Q+ RR FE+ FWSG
Sbjct: 5 AVDHMSMWSLISNASLVVQLVMLVLVAASVTSWIMIFQRGNMLRAARRSLDSFEERFWSG 64
Query: 67 QSLETVCKSLKN--HHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARE 124
L + + + + GL IF + E+ + C + P + D + R M VAI+RE
Sbjct: 65 IDLAKLYRQAGSEPDPDSGLERIFRAGFKEFSRLCQQSGVVPDAVMDGVARSMRVAISRE 124
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISIL 183
E++ + L FL ++ S +G+ G V G+M F+ +A + PGI E+LI+
Sbjct: 125 EEKLEQSLPFLATVGSTSPYIGLFGTVWGIMNSFRGLAQVQQATLSTVAPGIAEALIATA 184
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+GL +IP+ IAYN+F + + FA+EF AIL R+
Sbjct: 185 IGLFAAIPAVIAYNRFSARGELLIARYYTFADEFQAILHRKVH 227
>gi|54294382|ref|YP_126797.1| hypothetical protein lpl1451 [Legionella pneumophila str. Lens]
gi|54297487|ref|YP_123856.1| hypothetical protein lpp1532 [Legionella pneumophila str. Paris]
gi|53751272|emb|CAH12683.1| hypothetical protein lpp1532 [Legionella pneumophila str. Paris]
gi|53754214|emb|CAH15691.1| hypothetical protein lpl1451 [Legionella pneumophila str. Lens]
Length = 224
Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats.
Identities = 65/220 (29%), Positives = 118/220 (53%), Gaps = 7/220 (3%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLET 71
++ FMQ GL VK ++ +L I SI+SW++I Q++ F ++ F + FW L
Sbjct: 6 NVLMYFMQAGLVVKSVMLILLIASIISWTLIFQRAWFFNRRKQMTETFTRRFWDCGDLSK 65
Query: 72 VCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+ + ++ + G+AAIF + E+ + +G S + I R+M ++ A+E E++
Sbjct: 66 LYADVDSNSDERQGVAAIFHAGFKEFVRCRKQGKVS----IEPIQRVMQISHAKEAEKLE 121
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCV 188
+ L F S+ S VG+ G V G+M FQ++ + + PGI E+L++ LGL
Sbjct: 122 QHLPFFASVGSISPYVGLFGTVWGIMTSFQALGHAQQATIAMVAPGISEALVATALGLFT 181
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
+IP+ IAYN++ + + + F E +++ +QT G+
Sbjct: 182 AIPAVIAYNRYTTRANTLLNKYDLFQEELISLIEQQTSGS 221
>gi|33594235|ref|NP_881879.1| putative TolQ-like translocation protein [Bordetella pertussis
Tohama I]
gi|33603209|ref|NP_890769.1| putative TolQ-like translocation protein [Bordetella bronchiseptica
RB50]
gi|33564310|emb|CAE43611.1| putative TolQ-like translocation protein [Bordetella pertussis
Tohama I]
gi|33568840|emb|CAE34598.1| putative TolQ-like translocation protein [Bordetella bronchiseptica
RB50]
gi|332383649|gb|AEE68496.1| putative TolQ-like translocation protein [Bordetella pertussis CS]
Length = 226
Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats.
Identities = 70/221 (31%), Positives = 116/221 (52%), Gaps = 4/221 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S+ +L + V+ I+ LL SI+SW+ I K + +Q R FE FWSG L
Sbjct: 6 DMSLLSLISHASVPVQLIMLLLLGISIMSWTYIFAKRLAIKRAHQQTRRFEDDFWSGGDL 65
Query: 70 ETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPI-GIQDRIDRMMDVAIARELE 126
+ +++ + LA IF + M+E+ K+ A + + D R M A RE++
Sbjct: 66 AMLQQAVATRRDEQGALARIFDAGMTEFLKARRTSAAGDVNAVLDGPRRAMRAAYQREMD 125
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLG 185
+ L+FL S S +G+LG V G+M F ++ + ++ PGI E+LI+ +G
Sbjct: 126 SLESHLNFLASAGSVSPYIGLLGTVWGIMHAFIGLSNMQQATLAAVAPGIAEALIATAIG 185
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
L +IP+ +AYN+F D + +++ + F +EF IL RQ
Sbjct: 186 LFAAIPAVVAYNRFTNDIDRLSIRFDSFVDEFLNILQRQVR 226
>gi|148359110|ref|YP_001250317.1| biopolymer transport protein TolQ [Legionella pneumophila str.
Corby]
gi|296107158|ref|YP_003618858.1| biopolymer transport protein TolQ [Legionella pneumophila 2300/99
Alcoy]
gi|148280883|gb|ABQ54971.1| biopolymer transport protein TolQ [Legionella pneumophila str.
Corby]
gi|295649059|gb|ADG24906.1| biopolymer transport protein TolQ [Legionella pneumophila 2300/99
Alcoy]
gi|307610272|emb|CBW99836.1| hypothetical protein LPW_15971 [Legionella pneumophila 130b]
Length = 225
Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats.
Identities = 65/220 (29%), Positives = 118/220 (53%), Gaps = 7/220 (3%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLET 71
++ FMQ GL VK ++ +L I SI+SW++I Q++ F ++ F + FW L
Sbjct: 7 NVLMYFMQAGLVVKSVMLILLIASIISWTLIFQRAWFFNRRKQMTETFTRRFWDCGDLSK 66
Query: 72 VCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+ + ++ + G+AAIF + E+ + +G S + I R+M ++ A+E E++
Sbjct: 67 LYADVDSNSDERQGVAAIFHAGFKEFVRCRKQGKVS----IEPIQRVMQISHAKEAEKLE 122
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCV 188
+ L F S+ S VG+ G V G+M FQ++ + + PGI E+L++ LGL
Sbjct: 123 QHLPFFASVGSISPYVGLFGTVWGIMTSFQALGHAQQATIAMVAPGISEALVATALGLFT 182
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
+IP+ IAYN++ + + + F E +++ +QT G+
Sbjct: 183 AIPAVIAYNRYTTRANTLLNKYDLFQEELISLIEQQTSGS 222
>gi|110833616|ref|YP_692475.1| biopolymer transport protein TolQ [Alcanivorax borkumensis SK2]
gi|110646727|emb|CAL16203.1| biopolymer transport protein TolQ [Alcanivorax borkumensis SK2]
Length = 228
Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats.
Identities = 71/221 (32%), Positives = 112/221 (50%), Gaps = 4/221 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+S+ +L + V+ ++ LL + S+ SW +I+ + +R R FE FWS L
Sbjct: 7 MSVVSLISNATVVVQLVMALLILASLTSWYMIVGRFRVLGRAQRAGRAFEGKFWSSDDLA 66
Query: 71 TVCKSLKNHH--NIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
++ + + G AIF + E+ + K AR + D R M VA+ RE +
Sbjct: 67 SLYNQSRKEPDLDSGSEAIFRAGFQEFVRL-SKSARGGEAVMDGAQRAMRVALQREQTRL 125
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
T+ L FL ++ S VG+ G V G+M F ++A + V PGI E+LI+ +GL
Sbjct: 126 TKHLPFLATVGSTSPYVGLFGTVWGIMNSFMALANVKQATLSVVAPGIAEALIATAIGLF 185
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
+IP+ +AYN+F S + E FA EFS++L RQ G
Sbjct: 186 AAIPAVMAYNRFSAQSDALLTENEMFAEEFSSVLHRQAHGR 226
>gi|319941768|ref|ZP_08016090.1| TolQ [Sutterella wadsworthensis 3_1_45B]
gi|319804701|gb|EFW01568.1| TolQ [Sutterella wadsworthensis 3_1_45B]
Length = 223
Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats.
Identities = 64/220 (29%), Positives = 107/220 (48%), Gaps = 5/220 (2%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+SI L L VK ++ +L + S+ SW+VI QK RQ +FE FWSG L
Sbjct: 6 DLSILTLIANASLVVKAVLAILIVLSLASWTVIFQKFFVVRRAMRQTDDFESRFWSGTEL 65
Query: 70 ETVCKSLKNHHNIG--LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + + IF + M+E+ K + + + R M RE++
Sbjct: 66 TKLLDTANRSRDTSGMEERIFAAGMNEFMKQRQTAGAADT--VNSVSRAMRAVFTREMDR 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
+ L L S+ S +G+ G V G+M F ++ + ++ V PGI E+L++ +GL
Sbjct: 124 LENGLPMLASIGSTSPYIGLFGTVWGIMNAFTGLSSLENASLAVVAPGIAEALVATAIGL 183
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ AYN + + + +++GF+ EF IL RQ+
Sbjct: 184 FAAIPAVAAYNYYNNRVGRLSNRVDGFSEEFLNILERQSR 223
>gi|239947582|ref|ZP_04699335.1| protein TolQ [Rickettsia endosymbiont of Ixodes scapularis]
gi|239921858|gb|EER21882.1| protein TolQ [Rickettsia endosymbiont of Ixodes scapularis]
Length = 241
Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats.
Identities = 75/205 (36%), Positives = 118/205 (57%), Gaps = 3/205 (1%)
Query: 25 KCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGL 84
K ++ +L I SI SW++I K ++R+ + FE +FWSG LE + +S+K N L
Sbjct: 33 KSVMLMLLIASIWSWAIIWDKIFKLAQVQRRMKNFENVFWSGGVLEQLYESIKRSVNNPL 92
Query: 85 AAIFMSAMSEWKKSCDKGARSPI--GIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAG 142
A IF+SAM E K KG + ++RI M +A RE+E++ + LSFL ++ S+
Sbjct: 93 ALIFVSAMDECKSLSIKGLSDALKNNHKERITNSMYLAQNREVEKLEKNLSFLATVGSSA 152
Query: 143 LLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIE 201
VG+ G V G+M FQSIA + ++ V PGI E+L++ +GL +IP+ I YN I
Sbjct: 153 PFVGLFGTVWGIMHSFQSIANSKNTSLAVVAPGIAEALLATAIGLFAAIPAVIFYNYLIS 212
Query: 202 DSKKFAMQMEGFANEFSAILSRQTE 226
++E F +E ++ILS+ +
Sbjct: 213 RITLINNKIEDFISELNSILSKAID 237
>gi|327480559|gb|AEA83869.1| tolQ protein [Pseudomonas stutzeri DSM 4166]
Length = 237
Score = 219 bits (558), Expect = 3e-55, Method: Composition-based stats.
Identities = 59/220 (26%), Positives = 108/220 (49%), Gaps = 4/220 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+S++ L + L V+ ++ +L + S+ SW +II++S R R F+Q F G L
Sbjct: 8 MSVWGLISEASLVVQAVMVILVLASVSSWYLIIRRSAALHRSERLLRSFQQRFRQGGDLA 67
Query: 71 TVCKSLKNHH---NIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + + L IF++ E+ + + +P + + ++R + VAIA + E
Sbjct: 68 QLYREGQQQPLPEEAALQRIFLAGYGEFAQLQREAGIAPDAVAEGVERSLYVAIAEQEER 127
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
+ + L FL ++ S +G+ G V G+M F ++ + PGI E+LI+ +GL
Sbjct: 128 LEKGLQFLATVGSVSPYIGLFGTVWGIMNSFLGLSQVQQATLSTVAPGIAEALIATAIGL 187
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ +AYN+F + + F NE A L R+
Sbjct: 188 FAAIPAVMAYNRFAARGQTLVGRYYAFGNELQARLHRRLH 227
>gi|87199036|ref|YP_496293.1| MotA/TolQ/ExbB proton channel [Novosphingobium aromaticivorans DSM
12444]
gi|87134717|gb|ABD25459.1| Cell division and transport-associated protein TolQ
[Novosphingobium aromaticivorans DSM 12444]
Length = 233
Score = 219 bits (558), Expect = 3e-55, Method: Composition-based stats.
Identities = 63/226 (27%), Positives = 118/226 (52%), Gaps = 2/226 (0%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N A ++ LF+ V+ ++ L + SI +W++II S+ +++R +E+
Sbjct: 8 NGVSFAPTSLNPVQLFLDADYVVQAVMAGLVLASIWTWTIIIGFSLKMGSVQRGCDAYER 67
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
FW + ++ K ++ + +A++EW++S A G + R+ +D A+
Sbjct: 68 EFWEARDIDQFHKD-NKGKDLPSVRVVAAALTEWRRSTSGSAIDRDGTRQRLTTALDGAV 126
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLI 180
E + + +L+FL ++ S VG+ G V G+M F +I ++++ V PGI E+L
Sbjct: 127 VAETDALASRLNFLATVGSVAPFVGLFGTVWGIMDSFFNIGAQQNSSLAVVAPGISEALF 186
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+ +GL +IP+ IAYN+F +F ++ FA+ F A LSR+ E
Sbjct: 187 ATAIGLFAAIPAVIAYNRFSHRVNRFETRLYRFADRFHASLSRELE 232
>gi|126725526|ref|ZP_01741368.1| Biopolymer transport protein, TolQ [Rhodobacterales bacterium
HTCC2150]
gi|126704730|gb|EBA03821.1| Biopolymer transport protein, TolQ [Rhodobacterales bacterium
HTCC2150]
Length = 231
Score = 219 bits (558), Expect = 3e-55, Method: Composition-based stats.
Identities = 89/219 (40%), Positives = 128/219 (58%), Gaps = 1/219 (0%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
+D SI ALF + L VK ++ +L + S SWS+IIQK + + + R Q F++ FWSG+
Sbjct: 12 LDFSILALFWRATLTVKIVMMMLIVASFWSWSIIIQKLIGYRSARSQAARFDESFWSGEP 71
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
L+ + S+ N +F + M EW++S R G Q RIDR MDVAIA+E EE+
Sbjct: 72 LDELFDSIGPTPNSPGEKVFFAGMVEWRRSHRDDGRLIAGAQARIDRSMDVAIAKEAEEM 131
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
LSFL S+ S +G+ G V G+ F+ IA + N+ V PGI E+L++ LGL
Sbjct: 132 NRGLSFLASVGSTAPFIGLFGTVWGIKTAFEQIAIAQNTNLAVVAPGIAEALLATGLGLL 191
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ + YNK DS + E FA+EF+ ILSRQ +
Sbjct: 192 AAIPAVVFYNKLSADSDRILGGYEAFADEFATILSRQLD 230
>gi|197284478|ref|YP_002150350.1| colicin uptake protein TolQ [Proteus mirabilis HI4320]
gi|227356656|ref|ZP_03841042.1| TonB family auxiliary protein TolQ [Proteus mirabilis ATCC 29906]
gi|194681965|emb|CAR41393.1| biopolymer transport protein [Proteus mirabilis HI4320]
gi|227163164|gb|EEI48095.1| TonB family auxiliary protein TolQ [Proteus mirabilis ATCC 29906]
Length = 228
Score = 219 bits (558), Expect = 3e-55, Method: Composition-based stats.
Identities = 72/221 (32%), Positives = 114/221 (51%), Gaps = 3/221 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
+ D+++ LF++ GL VK I+ LL FSI SW++IIQ++ R+ +FE FWSG
Sbjct: 1 MADMNVIDLFLKAGLLVKLIMLLLIGFSIASWAIIIQRTKVLNAADREAADFEDKFWSGT 60
Query: 68 SLETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
L + K + + G IF S E+ + +P + + R M V+ REL
Sbjct: 61 DLARLYKESQARRDELSGAEQIFHSGFKEFARLHQANVHAPDAVVNGASRAMRVSFNREL 120
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILL 184
E + + FLG++ S +G+ G V G+M F ++ + + PGI E+LI+ +
Sbjct: 121 ESLETHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGSVKQATLQMVAPGIAEALIATAI 180
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
GL +IP+ +AYN+F + K + F EF IL RQ
Sbjct: 181 GLFAAIPAVMAYNRFTQRVNKLEQSYDNFMEEFLTILHRQA 221
>gi|238026340|ref|YP_002910571.1| MotA/TolQ/ExbB proton channel [Burkholderia glumae BGR1]
gi|237875534|gb|ACR27867.1| MotA/TolQ/ExbB proton channel [Burkholderia glumae BGR1]
Length = 225
Score = 219 bits (558), Expect = 3e-55, Method: Composition-based stats.
Identities = 73/223 (32%), Positives = 119/223 (53%), Gaps = 3/223 (1%)
Query: 7 AIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG 66
+ D+SI +L + + + ++ LL + S++SW+ I +K RRQ FE+ FWSG
Sbjct: 3 SAQDLSIVSLVLNASVLAQAVMGLLLLLSLMSWTFIFRKWFALRRARRQTERFERDFWSG 62
Query: 67 QSLETVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARE 124
L+ + +S N+ + L IF S M E+ K+ +K P I D R M A RE
Sbjct: 63 GDLQALYQSAANNRHTIGSLERIFESGMREFLKAKEKRISDPSLILDGARRAMRAAFQRE 122
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV-SIPGIIESLISIL 183
++ + L+FL S+ S +G+ G V G+M F+ +A + PGI E+L++
Sbjct: 123 MDMLEANLAFLASVGSVSPYIGLFGTVWGIMNSFRGLANVQQATLANVAPGIAEALVATA 182
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+GL +IP+ +AYN++ + + A + E F EFS IL RQ +
Sbjct: 183 IGLFAAIPAVVAYNRYAHEIDRLASRFETFVEEFSNILQRQAQ 225
>gi|33598299|ref|NP_885942.1| putative TolQ-like translocation protein [Bordetella parapertussis
12822]
gi|33566857|emb|CAE39072.1| putative TolQ-like translocation protein [Bordetella parapertussis]
Length = 226
Score = 219 bits (558), Expect = 3e-55, Method: Composition-based stats.
Identities = 70/221 (31%), Positives = 116/221 (52%), Gaps = 4/221 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S+ +L + V+ I+ LL SI+SW+ I K + +Q R FE FWSG L
Sbjct: 6 DMSLLSLVSHASVPVQLIMLLLLGISIMSWTYIFAKRLAIKRAHQQTRRFEDDFWSGGDL 65
Query: 70 ETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPI-GIQDRIDRMMDVAIARELE 126
+ +++ + LA IF + M+E+ K+ A + + D R M A RE++
Sbjct: 66 AMLQQAVATRRDEQGALARIFDAGMTEFLKARRTSAAGDVNAVLDGPRRAMRAAYQREMD 125
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLG 185
+ L+FL S S +G+LG V G+M F ++ + ++ PGI E+LI+ +G
Sbjct: 126 SLESHLNFLASAGSVSPYIGLLGTVWGIMHAFIGLSNMQQATLAAVAPGIAEALIATAIG 185
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
L +IP+ +AYN+F D + +++ + F +EF IL RQ
Sbjct: 186 LFAAIPAVVAYNRFTNDIDRLSIRFDSFVDEFLNILQRQVR 226
>gi|94311610|ref|YP_584820.1| MotA/TolQ/ExbB proton channel [Cupriavidus metallidurans CH34]
gi|93355462|gb|ABF09551.1| membrane spanning protein in TolA-TolQ-TolR complex [Cupriavidus
metallidurans CH34]
gi|222874295|gb|EEF11426.1| predicted protein [Populus trichocarpa]
Length = 227
Score = 219 bits (558), Expect = 3e-55, Method: Composition-based stats.
Identities = 72/229 (31%), Positives = 118/229 (51%), Gaps = 5/229 (2%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
MN + D+SI +L + L + ++ LL + S+ SW+ I +K + R Q FE
Sbjct: 1 MNPVTV-TQDLSIISLVLHASLLAQAVMALLLVMSLFSWTYIFRKHLALRAARTQTEGFE 59
Query: 61 QLFWSGQSLETVCKSL--KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMD 118
+ FW+G L+ + S H+ L IF S M E+ K+ ++G + + D R M
Sbjct: 60 RDFWAGGDLQALYNSAVNNRHNTGALERIFESGMGEFLKARERGNEA-GALLDAARRAMR 118
Query: 119 VAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV-SIPGIIE 177
A RE++ + L FL S+ S +G+ G V G+M F+ ++ + PGI E
Sbjct: 119 AAYQREMDVLESHLPFLASVGSVSPYIGLFGTVWGIMNAFRGLSNVQQATLASVAPGIAE 178
Query: 178 SLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+L++ +GL +IP+ IAYN++ + + A++ E F EF IL RQT
Sbjct: 179 ALVATAIGLFAAIPAVIAYNRYATEIDRLAIRFESFMEEFLNILQRQTR 227
>gi|326388394|ref|ZP_08209990.1| MotA/TolQ/ExbB proton channel [Novosphingobium nitrogenifigens DSM
19370]
gi|326207126|gb|EGD57947.1| MotA/TolQ/ExbB proton channel [Novosphingobium nitrogenifigens DSM
19370]
Length = 233
Score = 218 bits (557), Expect = 3e-55, Method: Composition-based stats.
Identities = 60/221 (27%), Positives = 117/221 (52%), Gaps = 2/221 (0%)
Query: 7 AIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG 66
A ++ LF+ + V+ ++ L + S+ W++I+ V +R + R++E FWS
Sbjct: 13 APTRLNPVELFLHADIVVQIVMGGLVLASVWVWTIIVGFMVRMTLVRSRCRKYEDGFWSA 72
Query: 67 QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
+ ++ + +I A + +A++EW++S + G + R+ M+ A+ +E +
Sbjct: 73 RDID-AYQKSHEDQDIPSARVVSAALAEWRRSTSGKSIDREGTRQRLSMAMESAVTQETD 131
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLG 185
++ +L+FL ++ + VG+ G V G+M F +I ++++ V PGI E+L + +G
Sbjct: 132 RLSNRLNFLATVGTVAPFVGLFGTVWGVMDSFFNIGAQQNSSLAVVAPGISEALFATAIG 191
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
L +IPS +AYN+F F + FA+ F LSR+ E
Sbjct: 192 LFAAIPSVVAYNRFSHRVNGFETGLFRFADRFHTTLSRELE 232
>gi|311103964|ref|YP_003976817.1| protein TolQ [Achromobacter xylosoxidans A8]
gi|310758653|gb|ADP14102.1| protein TolQ [Achromobacter xylosoxidans A8]
Length = 226
Score = 218 bits (557), Expect = 3e-55, Method: Composition-based stats.
Identities = 69/221 (31%), Positives = 113/221 (51%), Gaps = 4/221 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S+ +L + V+ I+ +L SI+SW+ I K + Q R FE FWSG L
Sbjct: 6 DMSLLSLISHASVPVQLIMLMLLGISIMSWTYIFAKRLAIKRAHAQTRRFEDDFWSGGDL 65
Query: 70 ETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGA-RSPIGIQDRIDRMMDVAIARELE 126
+ +++ + + LA IF + M+E+ K+ A + D R M A RE++
Sbjct: 66 SMLQQAVASRRDEQGALARIFDAGMTEFLKARRGNAAGDATAVLDGPRRAMRAAYQREMD 125
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV-SIPGIIESLISILLG 185
+ L+FL S S +G+LG V G+M F ++ + PGI E+LI+ +G
Sbjct: 126 SLESHLNFLASAGSVSPYIGLLGTVWGIMHAFIGLSNMQQATLASVAPGIAEALIATAIG 185
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
L +IP+ +AYN+F D + +++ + F +EF IL RQ
Sbjct: 186 LFAAIPAVVAYNRFTNDIDRISIRFDSFVDEFLNILQRQVR 226
>gi|254455761|ref|ZP_05069190.1| protein TolQ [Candidatus Pelagibacter sp. HTCC7211]
gi|207082763|gb|EDZ60189.1| protein TolQ [Candidatus Pelagibacter sp. HTCC7211]
Length = 224
Score = 218 bits (557), Expect = 4e-55, Method: Composition-based stats.
Identities = 73/222 (32%), Positives = 125/222 (56%), Gaps = 7/222 (3%)
Query: 2 NNYGLAI-MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
GL D S+ +LF++ + VK +I +L + SI SW+VII+K F + + EFE
Sbjct: 8 QAVGLGTNTDFSLLSLFLRADIVVKSVIIILILCSIYSWAVIIEKFRLFKKINKSSEEFE 67
Query: 61 QLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVA 120
+ FW+ +S E SL +A +F SAM K +S + +R+ M++
Sbjct: 68 EKFWNSKSAENFYNSLPTKVEDPMALVFQSAMEGLLK-----KKSKTNLSERMTAMLETG 122
Query: 121 IARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESL 179
+ +++ +I + +FL ++ S +G+ G V G+M FQSIA + ++ + PGI E+L
Sbjct: 123 VEKQMTKIDKGFTFLATVGSTAPFIGLFGTVWGIMNSFQSIAISRNTSLAIVAPGIAEAL 182
Query: 180 ISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+ LGL +IP+ +AYNKF DS+K++ ++E F+ +F I+
Sbjct: 183 FATALGLLAAIPAVVAYNKFNTDSQKYSQKLENFSKKFLTII 224
>gi|254253143|ref|ZP_04946461.1| MotA/TolQ/ExbB proton channel [Burkholderia dolosa AUO158]
gi|124895752|gb|EAY69632.1| MotA/TolQ/ExbB proton channel [Burkholderia dolosa AUO158]
Length = 237
Score = 218 bits (557), Expect = 4e-55, Method: Composition-based stats.
Identities = 73/229 (31%), Positives = 120/229 (52%), Gaps = 7/229 (3%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
MN D+SI +L + + + ++ LL + S++SW+ I +K R Q FE
Sbjct: 13 MNT----SQDLSIISLVLNASVLAQAVMGLLLLLSLMSWTFIFRKWFAIRRARAQTERFE 68
Query: 61 QLFWSGQSLETVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMD 118
+ FWSG L+ + +S N+ + L IF S M E+ K+ +K P + D R M
Sbjct: 69 RDFWSGGDLQALYQSAANNRHTIGALERIFESGMREFLKAKEKRLSDPGLVLDGARRAMR 128
Query: 119 VAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV-SIPGIIE 177
+ RE++ + L+FL S+ S +G+ G V G+M F+ +A + PGI E
Sbjct: 129 ASFQREMDVLESNLAFLASVGSVSPYIGLFGTVWGIMNSFRGLANVQQATLANVAPGIAE 188
Query: 178 SLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+L++ +GL +IP+ +AYN++ D + A++ E F EFS IL RQ +
Sbjct: 189 ALVATAIGLFAAIPAVVAYNRYAHDIDRLAIRFETFIEEFSNILQRQAQ 237
>gi|293603407|ref|ZP_06685834.1| TolQ colicin import protein [Achromobacter piechaudii ATCC 43553]
gi|292818180|gb|EFF77234.1| TolQ colicin import protein [Achromobacter piechaudii ATCC 43553]
Length = 226
Score = 218 bits (557), Expect = 4e-55, Method: Composition-based stats.
Identities = 69/221 (31%), Positives = 113/221 (51%), Gaps = 4/221 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S+ +L + V+ I+ +L SI+SW+ I K + Q R FE FWSG L
Sbjct: 6 DMSLLSLISHASVPVQLIMLMLLGISIMSWTYIFAKRLAIKRAHTQTRRFEDDFWSGGDL 65
Query: 70 ETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGAR-SPIGIQDRIDRMMDVAIARELE 126
+ +++ + + LA IF + M+E+ K+ A + D R M A RE++
Sbjct: 66 SMLQQAVASRRDEQGALARIFDAGMTEFLKARRGNASGDATALLDGPRRAMRAAYQREMD 125
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV-SIPGIIESLISILLG 185
+ L+FL S S +G+LG V G+M F ++ + PGI E+LI+ +G
Sbjct: 126 ALESHLNFLASAGSVSPYIGLLGTVWGIMHAFIGLSNMQQATLASVAPGIAEALIATAIG 185
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
L +IP+ +AYN+F D + +++ + F +EF IL RQ
Sbjct: 186 LFAAIPAVVAYNRFTNDIDRISIRFDSFVDEFLNILQRQVR 226
>gi|115350734|ref|YP_772573.1| MotA/TolQ/ExbB proton channel [Burkholderia ambifaria AMMD]
gi|115280722|gb|ABI86239.1| Cell division and transport-associated protein TolQ [Burkholderia
ambifaria AMMD]
Length = 242
Score = 218 bits (557), Expect = 4e-55, Method: Composition-based stats.
Identities = 73/229 (31%), Positives = 120/229 (52%), Gaps = 7/229 (3%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
MN D+SI +L + + + ++ LL + S++SW+ I +K R Q FE
Sbjct: 18 MNT----SQDLSIISLVLNASVLAQAVMGLLLLLSLMSWTFIFRKWFAIRRARAQTERFE 73
Query: 61 QLFWSGQSLETVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMD 118
+ FWSG L+ + +S N+ + L IF S M E+ K+ +K P + D R M
Sbjct: 74 RDFWSGGDLQALYQSAANNRHTIGALERIFESGMREFLKAKEKRLTDPGLVLDGARRAMR 133
Query: 119 VAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV-SIPGIIE 177
+ RE++ + L+FL S+ S +G+ G V G+M F+ +A + PGI E
Sbjct: 134 ASFQREMDVLEANLAFLASVGSVSPYIGLFGTVWGIMNSFRGLANVQQATLANVAPGIAE 193
Query: 178 SLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+L++ +GL +IP+ +AYN++ D + A++ E F EFS IL RQ +
Sbjct: 194 ALVATAIGLFAAIPAVVAYNRYAHDIDRLAIRFETFIEEFSNILQRQAQ 242
>gi|119504261|ref|ZP_01626341.1| Biopolymer transport protein [marine gamma proteobacterium
HTCC2080]
gi|119459769|gb|EAW40864.1| Biopolymer transport protein [marine gamma proteobacterium
HTCC2080]
Length = 235
Score = 218 bits (556), Expect = 4e-55, Method: Composition-based stats.
Identities = 63/227 (27%), Positives = 110/227 (48%), Gaps = 6/227 (2%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
++ I L + V+ ++ +L + S+ SW +I+Q+ + + + + FE FWSG L
Sbjct: 4 ELGILELIIGASGTVQVVMLILLLASVSSWYLIVQRVMLYRRMTEELGGFEAHFWSGVDL 63
Query: 70 ETVCKS-----LKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARE 124
+ + IG+ +IF + E+ + + + + R M VA RE
Sbjct: 64 AQIYREGNEALADGATPIGVESIFRAGFKEFSRLSQQSDIEADAVLEGARRAMRVATLRE 123
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISIL 183
+ + L FL S+ S +G+ G V G+M F+ +A + ++ PGI E+LI+
Sbjct: 124 SDRLESNLPFLASVGSTSPYIGLFGTVWGIMHSFRGLANATQATLATVAPGISEALIATA 183
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
+GL +IP+ +AYN+F S + F +EFS IL RQT +
Sbjct: 184 MGLFAAIPAVLAYNRFAARSDSLINHYDTFVDEFSGILQRQTYAQRA 230
>gi|183598185|ref|ZP_02959678.1| hypothetical protein PROSTU_01563 [Providencia stuartii ATCC 25827]
gi|188020351|gb|EDU58391.1| hypothetical protein PROSTU_01563 [Providencia stuartii ATCC 25827]
Length = 227
Score = 218 bits (556), Expect = 4e-55, Method: Composition-based stats.
Identities = 68/221 (30%), Positives = 112/221 (50%), Gaps = 3/221 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
+ D++I LF++ L V+ I+ +L FSI SW++IIQ++ R+ FE FWSG
Sbjct: 1 MTDMNIVDLFLKASLLVQIIMFVLIGFSIASWAIIIQRTKILNAAAREAEAFEDKFWSGI 60
Query: 68 SLETVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
L + K + + G IF + E+ + +P + R M +++ REL
Sbjct: 61 ELSRLYKESQARRDSLSGAEQIFHAGFKEFVRLHQANIHAPDAVVTGASRAMRISMNREL 120
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILL 184
E + + FLG++ S +G+ G V G+M F ++ + + PGI E+LI+ +
Sbjct: 121 ESVEAHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMVAPGIAEALIATAI 180
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
GL +IP+ +AYN+ + K + F EF AIL RQ
Sbjct: 181 GLFAAIPAVMAYNRLNQRVNKLEQSYDNFMEEFLAILHRQA 221
>gi|237748802|ref|ZP_04579282.1| TolQ [Oxalobacter formigenes OXCC13]
gi|229380164|gb|EEO30255.1| TolQ [Oxalobacter formigenes OXCC13]
Length = 228
Score = 218 bits (556), Expect = 4e-55, Method: Composition-based stats.
Identities = 73/224 (32%), Positives = 120/224 (53%), Gaps = 6/224 (2%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
D+S +L L V+ I+ LL + S++SW+ I QK + R + FE FWSG +
Sbjct: 5 QDLSFISLISNASLLVQLIMALLVVVSLMSWTFIFQKMFAIKSARTETVSFEHAFWSGGN 64
Query: 69 LETVCKSLKNHHNIG-LAAIFMSAMSEWKKSCD----KGARSPIGIQDRIDRMMDVAIAR 123
L+ + + ++ G L IF + M E+ K + A+ + + D R M A R
Sbjct: 65 LQNLYQRAGSNSKTGALERIFHAGMGEYIKGKNAISGHTAQDTVAVLDGARRAMRAAYQR 124
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISI 182
E++ + L+FL S+ S VG+ G V G+M F+ +A + + ++ PGI E+LI+
Sbjct: 125 EMDSLESHLAFLASVGSVSPYVGLFGTVWGIMNAFRGLANVHQATLATVAPGIAEALIAT 184
Query: 183 LLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+GL +IP+ +AYN+F D + +++ E F EFS IL RQ+
Sbjct: 185 AIGLFAAIPAVVAYNRFSHDIDRLSIRFETFIEEFSNILQRQSR 228
>gi|52841804|ref|YP_095603.1| biopolymer transport protein TolQ [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|52628915|gb|AAU27656.1| biopolymer transport protein TolQ [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
Length = 229
Score = 218 bits (556), Expect = 5e-55, Method: Composition-based stats.
Identities = 65/220 (29%), Positives = 118/220 (53%), Gaps = 7/220 (3%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLET 71
++ FMQ GL VK ++ +L I SI+SW++I Q++ F ++ F + FW L
Sbjct: 11 NVLMYFMQAGLVVKSVMLILLIASIISWTLIFQRAWFFNRRKQMTETFTRRFWDCGDLSK 70
Query: 72 VCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+ + ++ + G+AAIF + E+ + +G S + I R+M ++ A+E E++
Sbjct: 71 LYADVDSNSDERQGVAAIFHAGFKEFVRCRKQGKVS----IEPIQRVMQISHAKEAEKLE 126
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCV 188
+ L F S+ S VG+ G V G+M FQ++ + + PGI E+L++ LGL
Sbjct: 127 QHLPFFASVGSISPYVGLFGTVWGIMTSFQALGHAQQATIAMVAPGISEALVATALGLFT 186
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
+IP+ IAYN++ + + + F E +++ +QT G+
Sbjct: 187 AIPAVIAYNRYTTRANTLLNKYDLFQEELISLIEQQTSGS 226
>gi|330815671|ref|YP_004359376.1| tolQ protein [Burkholderia gladioli BSR3]
gi|327368064|gb|AEA59420.1| tolQ protein [Burkholderia gladioli BSR3]
Length = 225
Score = 218 bits (556), Expect = 5e-55, Method: Composition-based stats.
Identities = 72/223 (32%), Positives = 119/223 (53%), Gaps = 3/223 (1%)
Query: 7 AIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG 66
+ D+SI +L + + + ++ LL + S++SW+ I +K R+Q FE+ FWSG
Sbjct: 3 SAQDLSIVSLVLNASVLAQAVMGLLLLLSLMSWTFIFRKWFAIRRARKQTERFERDFWSG 62
Query: 67 QSLETVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARE 124
L+ + +S N+ + L IF S M E+ K+ +K P I D R M + RE
Sbjct: 63 GDLQALYQSAANNRHTIGSLERIFESGMREFLKAKEKRISDPSLILDGARRAMRASFQRE 122
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV-SIPGIIESLISIL 183
++ + L+FL S+ S +G+ G V G+M F+ +A + PGI E+L++
Sbjct: 123 MDMLEANLAFLASVGSVSPYIGLFGTVWGIMNSFRGLANVQQATLANVAPGIAEALVATA 182
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+GL +IP+ +AYN++ D + A + E F EFS IL RQ +
Sbjct: 183 IGLFAAIPAVVAYNRYAHDIDRLASRFETFVEEFSNILQRQAQ 225
>gi|226330932|ref|ZP_03806450.1| hypothetical protein PROPEN_04855 [Proteus penneri ATCC 35198]
gi|225201727|gb|EEG84081.1| hypothetical protein PROPEN_04855 [Proteus penneri ATCC 35198]
Length = 228
Score = 218 bits (556), Expect = 5e-55, Method: Composition-based stats.
Identities = 73/221 (33%), Positives = 114/221 (51%), Gaps = 3/221 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
+ D+++ LF++ GL VK I+ LL FSI SW++IIQ++ R+ +FE FWSG
Sbjct: 1 MADMNVIDLFLKAGLLVKLIMLLLIGFSIASWAIIIQRTKVLNAADREAADFEDKFWSGT 60
Query: 68 SLETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
L + K + + G IF S E+ + +P I + R M V+ REL
Sbjct: 61 DLARLYKDSQARRDELSGSEQIFHSGFKEFARLHQASVHAPDAIVNGASRAMRVSFNREL 120
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILL 184
E + + FLG++ S +G+ G V G+M F ++ + + PGI E+LI+ +
Sbjct: 121 ESLETHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGSVKQATLQMVAPGIAEALIATAI 180
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
GL +IP+ +AYN+F + K + F EF IL RQ
Sbjct: 181 GLFAAIPAVMAYNRFTQRVNKLEQSYDNFMEEFLTILHRQA 221
>gi|78065366|ref|YP_368135.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. 383]
gi|77966111|gb|ABB07491.1| Cell division and transport-associated protein TolQ [Burkholderia
sp. 383]
Length = 246
Score = 218 bits (556), Expect = 5e-55, Method: Composition-based stats.
Identities = 73/229 (31%), Positives = 120/229 (52%), Gaps = 7/229 (3%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
MN D+SI +L + + + ++ LL + S++SW+ I +K R Q FE
Sbjct: 22 MNT----SQDLSIISLVLNASVLAQAVMGLLLLLSLMSWTFIFRKWFAIRRARVQTERFE 77
Query: 61 QLFWSGQSLETVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMD 118
+ FWSG L+ + +S N+ + L IF S M E+ K+ +K P + D R M
Sbjct: 78 KDFWSGGDLQALYQSAANNRHTIGALERIFESGMREFLKAKEKRISDPGLVLDGARRAMR 137
Query: 119 VAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV-SIPGIIE 177
+ RE++ + L+FL S+ S +G+ G V G+M F+ +A + PGI E
Sbjct: 138 ASFQREMDVLEANLAFLASVGSVSPYIGLFGTVWGIMNSFRGLANVQQATLANVAPGIAE 197
Query: 178 SLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+L++ +GL +IP+ +AYN++ D + A++ E F EFS IL RQ +
Sbjct: 198 ALVATAIGLFAAIPAVVAYNRYAHDIDRLAIRFETFIEEFSNILQRQAQ 246
>gi|91205080|ref|YP_537435.1| hypothetical protein RBE_0265 [Rickettsia bellii RML369-C]
gi|157827583|ref|YP_001496647.1| hypothetical protein A1I_06470 [Rickettsia bellii OSU 85-389]
gi|91068624|gb|ABE04346.1| TolQ [Rickettsia bellii RML369-C]
gi|157802887|gb|ABV79610.1| TolQ [Rickettsia bellii OSU 85-389]
Length = 241
Score = 218 bits (555), Expect = 6e-55, Method: Composition-based stats.
Identities = 75/205 (36%), Positives = 117/205 (57%), Gaps = 3/205 (1%)
Query: 25 KCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGL 84
K ++ +L I SI SW++I+ K + ++R+ R FE FWSG LE + S+K N L
Sbjct: 33 KSVMLMLLIASIWSWAIILDKVFKLMQVQRKMRAFENTFWSGGVLEQLYDSIKRSVNNPL 92
Query: 85 AAIFMSAMSEWKKSCDKGARS--PIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAG 142
A IF+SAM E K KG ++RI M +A RE+E++ + LSFL ++ S+
Sbjct: 93 ALIFVSAMDECKSINTKGLPELLKNNHKERITNSMYLAQNREIEKLEKNLSFLATVGSSS 152
Query: 143 LLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIE 201
+G+ G V G+M FQSIA + ++ V PGI E+L++ +GL +IP+ I YN I
Sbjct: 153 PFIGLFGTVWGIMHSFQSIATSKNTSLAVVAPGIAEALLATAIGLFAAIPAVIFYNYLIS 212
Query: 202 DSKKFAMQMEGFANEFSAILSRQTE 226
++E F +E ++ILS+ +
Sbjct: 213 RITLINNKIEDFISELNSILSKAID 237
>gi|198282213|ref|YP_002218534.1| protein TolQ [Acidithiobacillus ferrooxidans ATCC 53993]
gi|218666774|ref|YP_002424578.1| TolQ protein [Acidithiobacillus ferrooxidans ATCC 23270]
gi|198246734|gb|ACH82327.1| protein TolQ [Acidithiobacillus ferrooxidans ATCC 53993]
gi|218518987|gb|ACK79573.1| TolQ protein [Acidithiobacillus ferrooxidans ATCC 23270]
Length = 233
Score = 218 bits (555), Expect = 6e-55, Method: Composition-based stats.
Identities = 71/230 (30%), Positives = 117/230 (50%), Gaps = 7/230 (3%)
Query: 1 MNNYGLA--IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFRE 58
M+ + +A +S+ L M V+ I+ +L I S++SW++I QK F +R
Sbjct: 1 MDPHSIANTAQSLSLGHLVMNASWVVQGILAILMIASVISWTIIFQKWAIFAAAQRALER 60
Query: 59 FEQLFWSGQSLETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRM 116
FE+ FWSG + + + + + N G +IF + E+++ + P D R
Sbjct: 61 FEKRFWSGGEMSQIYQHVSGNANLETGAGSIFCAGYEEFQR--QRNKIRPSDALDAARRA 118
Query: 117 MDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGI 175
M VA RE+ + L+FL S+SS +G+ G V G+M F +I + ++ P +
Sbjct: 119 MRVAQMREVGRLENNLAFLASVSSVSPFIGLFGTVWGIMTAFMNIGMAGQATLATVAPPV 178
Query: 176 IESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
E+LI+ GL +IP++ AYN++I K Q E F +EF+ IL RQ
Sbjct: 179 AEALIATAAGLFAAIPATAAYNRYIHQLDKLDAQYEVFMDEFTNILHRQV 228
>gi|121605813|ref|YP_983142.1| MotA/TolQ/ExbB proton channel [Polaromonas naphthalenivorans CJ2]
gi|120594782|gb|ABM38221.1| Cell division and transport-associated protein TolQ [Polaromonas
naphthalenivorans CJ2]
Length = 230
Score = 217 bits (554), Expect = 8e-55, Method: Composition-based stats.
Identities = 69/223 (30%), Positives = 113/223 (50%), Gaps = 3/223 (1%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
D+SI +L + V+ ++ LL SI SW+ I +K V ++ EF++ FWSG S
Sbjct: 3 QDLSIVSLLLHASWVVQAVVALLIGISIASWAAIFRKIVALKRAQQLNDEFDRGFWSGTS 62
Query: 69 LETVCKSLKNHH--NIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
L + + + + IF S M E++K ++ + D R M + RE++
Sbjct: 63 LNDLFAGAAQNAKISGSMERIFASGMREYQKLRERHISDAGTLLDGARRAMRASYQREMD 122
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLG 185
I LSFL ++ S VG+ G V G+M F +A + ++ PGI E+L++ +
Sbjct: 123 AIEANLSFLATVGSVSPYVGLFGTVWGIMHAFTGLAAMEQVTLATVAPGIAEALVATAIA 182
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
L +IP+ +AYN+F D + A ++E F EFS IL R +
Sbjct: 183 LFAAIPAVVAYNRFAHDIDRIANRLETFIEEFSNILQRNLGAH 225
>gi|194290410|ref|YP_002006317.1| membrane spanning protein in tola-tolq-tolr complex; proton channel
component [Cupriavidus taiwanensis LMG 19424]
gi|193224245|emb|CAQ70254.1| membrane spanning protein in TolA-TolQ-TolR complex; putative
proton channel component [Cupriavidus taiwanensis LMG
19424]
Length = 227
Score = 217 bits (553), Expect = 1e-54, Method: Composition-based stats.
Identities = 71/229 (31%), Positives = 118/229 (51%), Gaps = 5/229 (2%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
MN + D+SI L + + + ++ LL + S+ SW+ I +K + + R Q FE
Sbjct: 1 MNPVTV-TQDMSIVTLVLHASVLAQAVMALLLVMSLFSWTYIFRKHLAVRSARTQTEGFE 59
Query: 61 QLFWSGQSLETVCKSL--KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMD 118
+ FW+G L+ + S H+ L IF S M E+ K+ ++G + + D R M
Sbjct: 60 RDFWAGGDLQALYNSAVNNRHNTGALERIFESGMGEFLKARERGNEA-GALLDAARRAMR 118
Query: 119 VAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV-SIPGIIE 177
A RE++ + L FL S+ S +G+ G V G+M F+ ++ + PGI E
Sbjct: 119 AAYQREMDVLESHLPFLASVGSVSPYIGLFGTVWGIMNAFRGLSNVQQATLASVAPGIAE 178
Query: 178 SLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+L++ +GL +IP+ IAYN++ + + A++ E F EF IL RQT
Sbjct: 179 ALVATAIGLFAAIPAVIAYNRYATEIDRLAIRFESFMEEFLNILQRQTR 227
>gi|319786282|ref|YP_004145757.1| protein TolQ [Pseudoxanthomonas suwonensis 11-1]
gi|317464794|gb|ADV26526.1| protein TolQ [Pseudoxanthomonas suwonensis 11-1]
Length = 258
Score = 217 bits (553), Expect = 1e-54, Method: Composition-based stats.
Identities = 69/222 (31%), Positives = 112/222 (50%), Gaps = 4/222 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
I+ L ++ L VK I+ LL S++SW +I +K +F ++ EFE FWSG L
Sbjct: 36 INYLDLMLRASLPVKLIVLLLLAGSLISWVIIFRKLGSFKRADQEADEFENRFWSGADLG 95
Query: 71 TVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ + + + + GL AIF + E+ + DK + R M VA +RE+ ++
Sbjct: 96 KLYAAATDRNRVVGGLEAIFEAGFREFTRLRDKRRHDGRAQLEGAQRAMRVAFSREVGQL 155
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYS--NNVVSIPGIIESLISILLGL 186
L L ++ S VG++G V G+M + PGI E+L + +GL
Sbjct: 156 ERNLELLANIGSTAPYVGLVGTVFGIMVTMHDMVSQGQQVGIASVAPGISEALFATAIGL 215
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
V+IP+ AYN++ + + + E FA+EFS+IL RQT +
Sbjct: 216 FVAIPAVWAYNRYTSRVDRLSQRYESFADEFSSILQRQTGAD 257
>gi|254787338|ref|YP_003074767.1| protein TolQ [Teredinibacter turnerae T7901]
gi|237685839|gb|ACR13103.1| protein TolQ [Teredinibacter turnerae T7901]
Length = 229
Score = 217 bits (553), Expect = 1e-54, Method: Composition-based stats.
Identities = 73/223 (32%), Positives = 123/223 (55%), Gaps = 5/223 (2%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+SI L + L V+ ++ LLF+ S +SW +I+Q+ + R+ FREFE FWSG L
Sbjct: 6 LSILNLVLNASLLVQLVMLLLFMASAVSWVMIVQRGMYQGRARQAFREFESQFWSGIDLT 65
Query: 71 TVCKS----LKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
+ + H G+ IF + E+ + +G+ P I + R M VA +RE E
Sbjct: 66 QLYRQGNSGANKHSTDGIENIFRAGFKEFTRLRQQGSTDPDAIMEGTQRAMRVAHSREEE 125
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLG 185
++ L FL S++S +G+ G V G+M F+ +A + + ++ PGI E+L++ +G
Sbjct: 126 KLEANLPFLASVASVSPYIGLFGTVWGIMNSFRGLANVHQATLATVAPGISEALVATAMG 185
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
L +IP+ +AYN+F ++++ + + FA EFS+IL RQ
Sbjct: 186 LFAAIPAVLAYNRFSANAEQLTGKYQTFAEEFSSILHRQVHAK 228
>gi|118594341|ref|ZP_01551688.1| MotA/TolQ/ExbB proton channel [Methylophilales bacterium HTCC2181]
gi|118440119|gb|EAV46746.1| MotA/TolQ/ExbB proton channel [Methylophilales bacterium HTCC2181]
Length = 223
Score = 217 bits (553), Expect = 1e-54, Method: Composition-based stats.
Identities = 67/218 (30%), Positives = 109/218 (50%), Gaps = 4/218 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S F+L L V+ ++ +L S++SW I K +EFE+ FWSG L
Sbjct: 6 DLSFFSLIFGASLPVQLVMLILIAASVISWKFIYLKVKFLKESEENAQEFEKFFWSGGDL 65
Query: 70 ETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ +S+ N+ GLA IF S E+ + A I + + R M + RE++
Sbjct: 66 AKLYESVSNNSRGINGLAEIFRSGYKEYMGQKEHQAFDKKSI-ESVRRAMRASYNREIDT 124
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
+ + L FL S+ S +G+ G V G+M F ++ + PGI E+LI+ +GL
Sbjct: 125 LDQHLPFLASVGSVSPYIGLFGTVWGIMNAFIGLSNVAQATLSQVAPGIAEALIATAIGL 184
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+IP+ IAYN+F + +++ E F EF I+ R+
Sbjct: 185 FAAIPAVIAYNRFATKVDRLSLRFESFIEEFINIVDRK 222
>gi|113868788|ref|YP_727277.1| biopolymer transport protein [Ralstonia eutropha H16]
gi|113527564|emb|CAJ93909.1| biopolymer transport protein [Ralstonia eutropha H16]
Length = 227
Score = 216 bits (552), Expect = 1e-54, Method: Composition-based stats.
Identities = 71/229 (31%), Positives = 117/229 (51%), Gaps = 5/229 (2%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
MN + D+SI L + L + ++ LL + S+ SW+ I +K + + R Q FE
Sbjct: 1 MNPVTV-TQDMSIVTLVLHASLLAQAVMALLLVMSLFSWTYIFRKHLALRSARTQTEGFE 59
Query: 61 QLFWSGQSLETVCKSL--KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMD 118
+ FW+G L+ + S H+ L IF S M E+ K+ ++G + + D R M
Sbjct: 60 RDFWAGGDLQALYNSAVNNRHNTGALERIFESGMGEFLKARERGNEA-GALLDAARRAMR 118
Query: 119 VAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV-SIPGIIE 177
A RE++ + L FL S+ S +G+ G V G+M F+ ++ + PGI E
Sbjct: 119 AAYQREMDVLESHLPFLASVGSVSPYIGLFGTVWGIMNAFRGLSNVQQATLASVAPGIAE 178
Query: 178 SLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+L++ +GL +IP+ IAYN++ + + A++ E F EF IL RQ
Sbjct: 179 ALVATAIGLFAAIPAVIAYNRYATEIDRLAIRFESFMEEFLNILQRQAR 227
>gi|15892345|ref|NP_360059.1| tolQ protein [Rickettsia conorii str. Malish 7]
gi|34580648|ref|ZP_00142128.1| tolQ protein [Rickettsia sibirica 246]
gi|229586571|ref|YP_002845072.1| TolQ [Rickettsia africae ESF-5]
gi|15619491|gb|AAL02960.1| tolQ protein [Rickettsia conorii str. Malish 7]
gi|28262033|gb|EAA25537.1| tolQ protein [Rickettsia sibirica 246]
gi|228021621|gb|ACP53329.1| TolQ [Rickettsia africae ESF-5]
Length = 241
Score = 216 bits (552), Expect = 1e-54, Method: Composition-based stats.
Identities = 75/205 (36%), Positives = 119/205 (58%), Gaps = 3/205 (1%)
Query: 25 KCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGL 84
K ++ +L I SI SW++I+ K + +++ R FE +FWSG LE + +S+K N L
Sbjct: 33 KSVMLMLLIASIWSWAIILDKIFKLVQVQKSMRAFENVFWSGGVLEQLYESIKRSVNNPL 92
Query: 85 AAIFMSAMSEWKKSCDKGARSPI--GIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAG 142
A IF+SAM E K KG + ++RI M +A RE+E++ + LSFL ++ S+
Sbjct: 93 ALIFVSAMDECKSLSTKGLSEGLKNNHKERITGAMYLAQNREVEKLEKNLSFLATVGSSA 152
Query: 143 LLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIE 201
VG+ G V G+M FQSIA + ++ V PGI E+L++ +GL +IP+ I YN I
Sbjct: 153 PFVGLFGTVWGIMHSFQSIATSKNTSLAVVAPGIAEALLATAIGLFAAIPAVIFYNYLIS 212
Query: 202 DSKKFAMQMEGFANEFSAILSRQTE 226
++E F +E ++ILS+ +
Sbjct: 213 RITLINNKIEDFISELNSILSKAID 237
>gi|90580124|ref|ZP_01235932.1| Putative TolQ protein [Vibrio angustum S14]
gi|90439009|gb|EAS64192.1| Putative TolQ protein [Vibrio angustum S14]
Length = 229
Score = 216 bits (552), Expect = 1e-54, Method: Composition-based stats.
Identities = 60/219 (27%), Positives = 109/219 (49%), Gaps = 3/219 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
++++ + + G ++ +L SI SW++II++S R+ +FE FWSG L
Sbjct: 4 ELTVLDIILNSGALEIMVMLILLGMSIASWTMIIKRSQVLSEASRKATQFEDRFWSGIDL 63
Query: 70 ETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ K ++ + G IF S E+ + + P + + R M V++++E++E
Sbjct: 64 SQLYKEVQARKDDLTGSEQIFYSGFKEFARLHRSNDKVPEAVMEGTSRAMRVSLSKEVDE 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ L FL ++ S +G+ G VLG+M F ++ + ++ PGI +LI+ +GL
Sbjct: 124 LETNLPFLATVGSISPYIGLFGTVLGIMTAFIALGAMKQPTLATVAPGIAGALIATAMGL 183
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ + YN+ K F EFS+IL RQ
Sbjct: 184 FAAIPAVMFYNRLTNKVSKLEHTYATFMEEFSSILHRQA 222
>gi|157828297|ref|YP_001494539.1| tolQ protein [Rickettsia rickettsii str. 'Sheila Smith']
gi|165933001|ref|YP_001649790.1| TolQ [Rickettsia rickettsii str. Iowa]
gi|13235464|emb|CAC33699.1| TolQ protein [Rickettsia rickettsii]
gi|157800778|gb|ABV76031.1| tolQ protein [Rickettsia rickettsii str. 'Sheila Smith']
gi|165908088|gb|ABY72384.1| TolQ [Rickettsia rickettsii str. Iowa]
Length = 241
Score = 216 bits (552), Expect = 1e-54, Method: Composition-based stats.
Identities = 75/205 (36%), Positives = 120/205 (58%), Gaps = 3/205 (1%)
Query: 25 KCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGL 84
K ++ +L I SI SW++I+ K + +++ R FE +FWSG LE + +S+K N L
Sbjct: 33 KSVMLMLLIASIWSWAIILDKIFKLVQVQKSMRAFENVFWSGGVLEQLYESIKRSVNNPL 92
Query: 85 AAIFMSAMSEWKKSCDKGARSPI--GIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAG 142
A IF+SAM E K KG + ++RI +M +A RE+E++ + LSFL ++ S+
Sbjct: 93 ALIFVSAMDECKSLSTKGLSESLKNNHKERITGVMYLAQNREVEKLEKNLSFLATVGSSA 152
Query: 143 LLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIE 201
VG+ G V G+M FQSIA + ++ V PGI E+L++ +GL +IP+ I YN I
Sbjct: 153 PFVGLFGTVWGIMHSFQSIATSKNTSLAVVAPGIAEALLATAIGLFAAIPAVIFYNYLIS 212
Query: 202 DSKKFAMQMEGFANEFSAILSRQTE 226
++E F +E ++ILS+ +
Sbjct: 213 RITLINNKIEDFISELNSILSKAID 237
>gi|89075794|ref|ZP_01162182.1| Putative TolQ protein [Photobacterium sp. SKA34]
gi|89048526|gb|EAR54101.1| Putative TolQ protein [Photobacterium sp. SKA34]
Length = 229
Score = 216 bits (552), Expect = 2e-54, Method: Composition-based stats.
Identities = 60/219 (27%), Positives = 108/219 (49%), Gaps = 3/219 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
++++ + + G ++ +L SI SW++II++S R+ FE FWSG L
Sbjct: 4 ELTVLDIILNSGALEIMVMLILLGMSIASWTMIIKRSQVLSEASRKATNFEDRFWSGIDL 63
Query: 70 ETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ K ++ + G IF S E+ + + P + + R M V++++E++E
Sbjct: 64 SQLYKEVQARKDDLTGSEQIFYSGFKEFARLHRSNDKVPEAVMEGTSRAMRVSLSKEVDE 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ L FL ++ S +G+ G VLG+M F ++ + ++ PGI +LI+ +GL
Sbjct: 124 LETNLPFLATVGSISPYIGLFGTVLGIMTAFIALGAMKQPTLATVAPGIAGALIATAMGL 183
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ + YN+ K F EFS+IL RQ
Sbjct: 184 FAAIPAVMFYNRLTNKVSKLEHTYATFMEEFSSILHRQA 222
>gi|283479855|emb|CAY75771.1| Biopolymer transport exbB protein [Erwinia pyrifoliae DSM 12163]
Length = 337
Score = 216 bits (551), Expect = 2e-54, Method: Composition-based stats.
Identities = 52/222 (23%), Positives = 104/222 (46%), Gaps = 2/222 (0%)
Query: 6 LAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS 65
L MD+S++ ++ + VK ++ L + S+ +W++ KS+ + R++ + + L
Sbjct: 98 LMQMDLSVWGMYQHADIVVKAVMIGLLLASVATWAIFFSKSIELRSARKRLKREQLLLAD 157
Query: 66 GQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
+SL+ + + + L+ I + +E + G+ GI++R ++ +A
Sbjct: 158 ARSLDEASQIGGDFQSQSLS-ILLIKEAENELELSAGSDDNNGIKERTAFRLERRVAAIG 216
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILL 184
FL ++ S VG+ G V G+M F IA + N+ V PGI E+L++ +
Sbjct: 217 RHPGRGNGFLATIGSIAPFVGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGIAEALLATAI 276
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
GL +IP+ + YN F + + A + + SR +
Sbjct: 277 GLVAAIPAVVIYNVFARAIGSYKASLGDVAAQVLLLQSRDLD 318
>gi|161525753|ref|YP_001580765.1| protein TolQ [Burkholderia multivorans ATCC 17616]
gi|189349525|ref|YP_001945153.1| biopolymer transport protein [Burkholderia multivorans ATCC 17616]
gi|221201009|ref|ZP_03574049.1| protein TolQ [Burkholderia multivorans CGD2M]
gi|221206539|ref|ZP_03579552.1| protein TolQ [Burkholderia multivorans CGD2]
gi|221214393|ref|ZP_03587364.1| protein TolQ [Burkholderia multivorans CGD1]
gi|160343182|gb|ABX16268.1| protein TolQ [Burkholderia multivorans ATCC 17616]
gi|189333547|dbj|BAG42617.1| biopolymer transport protein [Burkholderia multivorans ATCC 17616]
gi|221165650|gb|EED98125.1| protein TolQ [Burkholderia multivorans CGD1]
gi|221173848|gb|EEE06282.1| protein TolQ [Burkholderia multivorans CGD2]
gi|221178859|gb|EEE11266.1| protein TolQ [Burkholderia multivorans CGD2M]
Length = 225
Score = 216 bits (551), Expect = 2e-54, Method: Composition-based stats.
Identities = 71/221 (32%), Positives = 118/221 (53%), Gaps = 3/221 (1%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
D+SI +L + + + ++ LL + S++SW+ I +K R Q FE+ FWSG
Sbjct: 5 QDLSIISLVLNASVLAQAVMGLLLLLSLMSWTFIFRKWFAIRRARAQTERFERDFWSGGD 64
Query: 69 LETVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
L+ + +S N+ + L IF S M E+ K+ +K P + D R M + RE++
Sbjct: 65 LQALYQSAANNRHTIGALERIFESGMREFLKAKEKRLSDPGLVLDGARRAMRASFQREMD 124
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV-SIPGIIESLISILLG 185
+ L+FL S+ S +G+ G V G+M F+ +A + PGI E+L++ +G
Sbjct: 125 VLESNLAFLASVGSVSPYIGLFGTVWGIMNSFRGLANVQQATLANVAPGIAEALVATAIG 184
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
L +IP+ +AYN++ D + A++ E F EFS IL RQ +
Sbjct: 185 LFAAIPAVVAYNRYAHDIDRLAIRFETFIEEFSNILQRQAQ 225
>gi|157803962|ref|YP_001492511.1| hypothetical protein A1E_03995 [Rickettsia canadensis str. McKiel]
gi|157785225|gb|ABV73726.1| hypothetical protein A1E_03995 [Rickettsia canadensis str. McKiel]
Length = 242
Score = 216 bits (551), Expect = 2e-54, Method: Composition-based stats.
Identities = 76/205 (37%), Positives = 121/205 (59%), Gaps = 3/205 (1%)
Query: 25 KCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGL 84
K ++ +LFI SI SW++I+ K + ++R+ R FE +FWSG+ LE + S+K N L
Sbjct: 34 KSVMLILFIASIWSWAIILNKIFKLMQVQRRMRAFENVFWSGRVLEQLYDSIKRSVNNPL 93
Query: 85 AAIFMSAMSEWKKSCDKGARSPI--GIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAG 142
A IF+SAM E K KG + + RI +M +A RE+E++ + LSFL ++ S+
Sbjct: 94 ALIFVSAMDECKSLNSKGLSDALKNNHKGRITGVMYLAQNREIEKLEKNLSFLATVGSSS 153
Query: 143 LLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIE 201
+G+ G V G+M FQSIA + ++ V PGI E+L++ +GL +IP+ I YN I
Sbjct: 154 PFIGLFGTVWGIMHSFQSIATSKNTSLAVVAPGIAEALLATAIGLFAAIPAVIFYNYLIS 213
Query: 202 DSKKFAMQMEGFANEFSAILSRQTE 226
++E F +E ++ILS+ +
Sbjct: 214 RIILINNKIEDFISELNSILSKAID 238
>gi|307545153|ref|YP_003897632.1| biopolymer transporter TolQ [Halomonas elongata DSM 2581]
gi|307217177|emb|CBV42447.1| K03562 biopolymer transport protein TolQ [Halomonas elongata DSM
2581]
Length = 225
Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats.
Identities = 76/220 (34%), Positives = 117/220 (53%), Gaps = 3/220 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+SI L M V+ ++ LL I S+LSW VI Q++ R+ REFE FWSG L
Sbjct: 1 MSIPHLIMNASGVVQAVMLLLLIGSLLSWVVIFQRTFVMRRARKAHREFEDRFWSGVDLN 60
Query: 71 TVCKSLKNHHNI-GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+ + + G IF + E+ + K RSP I D + R M VA +RE + +
Sbjct: 61 ELYRETPAEQDTLGTEHIFRAGFREFNRLLPK-TRSPQAILDGVQRSMRVAWSREEDRLN 119
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCV 188
L FL +++S+ +G+ G V G+MG FQS++ + ++ P I E+LI+ +GL
Sbjct: 120 LHLVFLATVASSSPYIGLFGTVWGIMGSFQSLSMAQQATLATVAPWIAEALIATAMGLFA 179
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
+IP+ I YN+ +S + + E FA EF +IL R +G
Sbjct: 180 AIPAVIFYNRLSAESSRLLGKYEDFAEEFHSILHRNLQGR 219
>gi|148261884|ref|YP_001236011.1| MotA/TolQ/ExbB proton channel [Acidiphilium cryptum JF-5]
gi|326405388|ref|YP_004285470.1| protein TolQ [Acidiphilium multivorum AIU301]
gi|146403565|gb|ABQ32092.1| Cell division and transport-associated protein TolQ [Acidiphilium
cryptum JF-5]
gi|325052250|dbj|BAJ82588.1| protein TolQ [Acidiphilium multivorum AIU301]
Length = 238
Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats.
Identities = 84/233 (36%), Positives = 130/233 (55%), Gaps = 5/233 (2%)
Query: 1 MNNYGLAI--MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFRE 58
+N GLA ++S+ +F+ G V+ +I LL S+ W++II+KS++ + R+
Sbjct: 5 VNTAGLAAPGTNLSLLGMFLHAGFVVQVVIVLLLAASVWVWAIIIEKSLSIRRVNREANA 64
Query: 59 FEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARS--PIGIQDRIDRM 116
FE FWSG+SL+ + +AA+F +AM EW++S + +RIDR
Sbjct: 65 FEDKFWSGRSLDELYDQEGAEPGHPMAAVFGAAMGEWRRSSRIAGADVVRSSVAERIDRA 124
Query: 117 MDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGI 175
M V RE+E + + FL S+ + VG+ G V G+M F +IA ++ N+ V PGI
Sbjct: 125 MGVTTMREMERLERYMVFLASIGAVAPFVGLFGTVWGIMHSFSAIAAMHNTNLAVVAPGI 184
Query: 176 IESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
E+L + +GL +IP+ +AYNK D + A ++E F EFSAILSRQ E
Sbjct: 185 AEALFATAIGLVAAIPAVLAYNKLSTDLARLAARLEAFGAEFSAILSRQAEER 237
>gi|120554622|ref|YP_958973.1| MotA/TolQ/ExbB proton channel [Marinobacter aquaeolei VT8]
gi|120324471|gb|ABM18786.1| Cell division and transport-associated protein TolQ [Marinobacter
aquaeolei VT8]
Length = 229
Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats.
Identities = 70/221 (31%), Positives = 116/221 (52%), Gaps = 4/221 (1%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
++S++ L G+ V+ ++ LL + S++SW++I Q+ F R+ EFE FWSG
Sbjct: 3 TELSVWHLIANAGILVQLVMLLLMLASVVSWALIFQRLQVFRKARQAQLEFEDRFWSGMD 62
Query: 69 LETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
L + K + G+ ++F + E+ + + +R + + R M VA +RE E
Sbjct: 63 LGQLYKEVSAEPTPFSGMESVFRAGFKEFSRLRQQ-SRDADAVMEGTQRAMRVAFSREQE 121
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLG 185
+ L FL ++ S VG+ G V G+M F+ +A + ++ PGI E+LI+ +G
Sbjct: 122 RLETHLPFLATVGSTSPYVGLFGTVWGIMNSFRGLAQVQQATLATVAPGISEALIATAMG 181
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
L +IP+ IAYN+F S E FA EFS+IL R+
Sbjct: 182 LFAAIPAVIAYNRFSAMSDALLKNYETFAEEFSSILHRRVH 222
>gi|238650758|ref|YP_002916612.1| tolQ protein [Rickettsia peacockii str. Rustic]
gi|238624856|gb|ACR47562.1| tolQ protein [Rickettsia peacockii str. Rustic]
Length = 241
Score = 215 bits (549), Expect = 3e-54, Method: Composition-based stats.
Identities = 74/205 (36%), Positives = 118/205 (57%), Gaps = 3/205 (1%)
Query: 25 KCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGL 84
K ++ +L I SI SW++I+ K + +++ R FE +FWSG LE + +S+K N L
Sbjct: 33 KSVMLMLLIASIWSWAIILDKIFKLVQVQKSMRAFENVFWSGGVLEQLYESIKRSVNNPL 92
Query: 85 AAIFMSAMSEWKKSCDKGARSPI--GIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAG 142
A IF+SAM E K KG + ++RI M +A R +E++ + LSFL ++ S+
Sbjct: 93 ALIFVSAMDECKSLSTKGLSEGLKNNHKERITGAMYLAQNRAVEKLEKNLSFLATVGSSA 152
Query: 143 LLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIE 201
VG+ G V G+M FQSIA + ++ V PGI E+L++ +GL +IP+ I YN I
Sbjct: 153 PFVGLFGTVWGIMHSFQSIATSKNTSLAVVAPGIAEALLATAIGLFAAIPAVIFYNYLIS 212
Query: 202 DSKKFAMQMEGFANEFSAILSRQTE 226
++E F +E ++ILS+ +
Sbjct: 213 RITLINNKIEDFISELNSILSKAID 237
>gi|146282309|ref|YP_001172462.1| tolQ protein [Pseudomonas stutzeri A1501]
gi|145570514|gb|ABP79620.1| tolQ protein [Pseudomonas stutzeri A1501]
Length = 237
Score = 215 bits (549), Expect = 3e-54, Method: Composition-based stats.
Identities = 58/220 (26%), Positives = 108/220 (49%), Gaps = 4/220 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+S++ L + L V+ ++ +L + S+ SW +II++S R F+Q F G L
Sbjct: 8 MSVWGLISEASLVVQAVMVILVLASVSSWYLIIRRSAALHRSERLLHSFQQRFRQGGDLA 67
Query: 71 TVCKSLKNHH---NIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + + L IF++ ++ + + +P + + ++R + VAIA + E
Sbjct: 68 QLYREGQQQPLPEEAALQRIFLAGYGDFAQLQREAGIAPDAVAEGVERSLYVAIAEQEER 127
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
+ + L FL ++ S +G+ G V G+M F ++ + PGI E+LI+ +GL
Sbjct: 128 LEKGLQFLATVGSVSPYIGLFGTVWGIMNSFLGLSQVQQATLSTVAPGIAEALIATAIGL 187
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ +AYN+F +K + F NE A L R+
Sbjct: 188 FAAIPAVMAYNRFAAHGQKLVGRYYAFGNELQARLHRRLH 227
>gi|107021878|ref|YP_620205.1| MotA/TolQ/ExbB proton channel [Burkholderia cenocepacia AU 1054]
gi|116688826|ref|YP_834449.1| MotA/TolQ/ExbB proton channel [Burkholderia cenocepacia HI2424]
gi|170732125|ref|YP_001764072.1| protein TolQ [Burkholderia cenocepacia MC0-3]
gi|254246217|ref|ZP_04939538.1| MotA/TolQ/ExbB proton channel [Burkholderia cenocepacia PC184]
gi|105892067|gb|ABF75232.1| Cell division and transport-associated protein TolQ [Burkholderia
cenocepacia AU 1054]
gi|116646915|gb|ABK07556.1| Cell division and transport-associated protein TolQ [Burkholderia
cenocepacia HI2424]
gi|124870993|gb|EAY62709.1| MotA/TolQ/ExbB proton channel [Burkholderia cenocepacia PC184]
gi|169815367|gb|ACA89950.1| protein TolQ [Burkholderia cenocepacia MC0-3]
Length = 225
Score = 215 bits (549), Expect = 3e-54, Method: Composition-based stats.
Identities = 71/222 (31%), Positives = 119/222 (53%), Gaps = 3/222 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
+ D+SI +L + + + ++ LL + S++SW+ I +K R Q FE+ FWSG
Sbjct: 4 VQDLSIISLVLNASVLAQAVMGLLLLLSLMSWTFIFRKWFAIRRARAQTERFEKDFWSGG 63
Query: 68 SLETVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
L+ + +S N+ + L IF S M E+ K+ +K P + D R M + RE+
Sbjct: 64 DLQALYQSAANNRHTIGALERIFESGMREFLKAKEKRLSDPGLVLDGARRAMRASFQREM 123
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV-SIPGIIESLISILL 184
+ + L+FL S+ S +G+ G V G+M F+ +A + PGI E+L++ +
Sbjct: 124 DVLEANLAFLASVGSVSPYIGLFGTVWGIMNSFRGLANVQQATLANVAPGIAEALVATAI 183
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
GL +IP+ +AYN++ D + A++ E F EFS IL RQ +
Sbjct: 184 GLFAAIPAVVAYNRYAHDIDRLAIRFETFIEEFSNILQRQAQ 225
>gi|134294847|ref|YP_001118582.1| MotA/TolQ/ExbB proton channel [Burkholderia vietnamiensis G4]
gi|134138004|gb|ABO53747.1| Cell division and transport-associated protein TolQ [Burkholderia
vietnamiensis G4]
Length = 225
Score = 215 bits (549), Expect = 3e-54, Method: Composition-based stats.
Identities = 71/221 (32%), Positives = 118/221 (53%), Gaps = 3/221 (1%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
D+SI +L + + + ++ LL + S++SW+ I +K R Q FE+ FWSG
Sbjct: 5 QDLSIISLVLNASVLAQAVMGLLLLLSLMSWTFIFRKWFAIRRARAQTERFEKDFWSGGD 64
Query: 69 LETVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
L+ + +S N+ + L IF + M E+ K+ +K P + D R M A RE++
Sbjct: 65 LQALYQSAANNRHTIGALERIFEAGMREFLKAKEKRLSDPGLVLDGARRAMRAAFQREMD 124
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV-SIPGIIESLISILLG 185
+ L+FL S+ S +G+ G V G+M F+ +A + PGI E+L++ +G
Sbjct: 125 VLEANLAFLASVGSVSPYIGLFGTVWGIMNSFRGLANVQQATLANVAPGIAEALVATAIG 184
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
L +IP+ +AYN++ D + A++ E F EFS IL RQ +
Sbjct: 185 LFAAIPAVVAYNRYAHDIDRLAIRFETFIEEFSNILQRQAQ 225
>gi|288940687|ref|YP_003442927.1| protein TolQ [Allochromatium vinosum DSM 180]
gi|288896059|gb|ADC61895.1| protein TolQ [Allochromatium vinosum DSM 180]
Length = 224
Score = 215 bits (549), Expect = 3e-54, Method: Composition-based stats.
Identities = 65/221 (29%), Positives = 115/221 (52%), Gaps = 3/221 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S+FAL + L V+ ++ +L + S++SW++I+ ++ R+ FE+ FWSG L
Sbjct: 4 DLSLFALILDASLVVQLVLLVLVVASVISWTMILDRTRVLGRARKLADRFEERFWSGGDL 63
Query: 70 ETVCKSLKNHH--NIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ K L GLA IF + E+ + + +R M VA++RE++
Sbjct: 64 GALYKELSQDEKGGQGLAVIFRAGFKEFVRLRKVEDTDMPSVLQGAERSMRVALSREMDR 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV-SIPGIIESLISILLGL 186
+ L+FL ++ S +G+ G V G+M F ++ + PGI E+L++ +GL
Sbjct: 124 LETNLAFLATVGSTSPYIGLFGTVWGIMQSFHALGNVEQATLALVAPGISEALVATAIGL 183
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEG 227
+IP+ IAYN++ ++ + E F EF+ +L RQ G
Sbjct: 184 FAAIPAVIAYNRYSNQVERLNNRYEEFIEEFATLLQRQGRG 224
>gi|70733350|ref|YP_263125.1| TonB system transport protein ExbB [Pseudomonas fluorescens Pf-5]
gi|68347649|gb|AAY95255.1| TonB system transport protein ExbB [Pseudomonas fluorescens Pf-5]
Length = 334
Score = 215 bits (549), Expect = 3e-54, Method: Composition-based stats.
Identities = 55/226 (24%), Positives = 104/226 (46%), Gaps = 5/226 (2%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N G+A D+S + ++ + VK ++ L I SI++W++ I K + +R+ R
Sbjct: 97 NTLGMA-HDLSPWGMYQNADIIVKLVMIGLAIASIITWTIWIAKGFELMGAKRRLRSEIA 155
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
+L+ + + + A+ E + S +R GI++R+ ++ +
Sbjct: 156 ALKKATTLKEASATATKEGTLA-NLLVHDALEEMRLSA--NSREKEGIKERVSFRLERLV 212
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLI 180
A ++ L ++ S VG+ G V G+M F IA + N+ V PGI E+L+
Sbjct: 213 AACGRNMSSGTGVLATIGSTAPFVGLFGTVWGIMNSFIGIAKTQTTNLAVVAPGIAEALL 272
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+ LGL +IP+ + YN F + Q+ + E ++SR +
Sbjct: 273 ATALGLVAAIPAVVIYNVFARSITGYKAQVTDASAEVLLLVSRDLD 318
>gi|254521584|ref|ZP_05133639.1| protein TolQ [Stenotrophomonas sp. SKA14]
gi|219719175|gb|EED37700.1| protein TolQ [Stenotrophomonas sp. SKA14]
Length = 259
Score = 215 bits (549), Expect = 3e-54, Method: Composition-based stats.
Identities = 71/222 (31%), Positives = 112/222 (50%), Gaps = 4/222 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
I+ L + L VK I+ LL + S +SW +I +K+ F R+ EFE FWSG L
Sbjct: 37 INYLELMAKASLPVKIIVLLLLVGSFVSWVIIFRKARVFKQATREADEFENRFWSGADLG 96
Query: 71 TVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ S + GL AIF + E+ + DK + R M RE++++
Sbjct: 97 KLYSSATDRSRNVGGLEAIFEAGFREYTRLRDKRRLDGRAQLEGAQRAMRTTYTREVDQL 156
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGL 186
L L ++ S VG++G V G+M + +G + PGI E+L + +GL
Sbjct: 157 ERNLELLANIGSTAPYVGLVGTVFGIMVTMHDMISSGAQAGIAAVAPGISEALFATAIGL 216
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
V+IP+ AYN+F ++ +++ E FA EFS+IL RQ+ G+
Sbjct: 217 FVAIPAVWAYNRFTTRVERMSVRFETFAEEFSSILQRQSAGD 258
>gi|206561544|ref|YP_002232309.1| putative TolQ transport transmembrane protein [Burkholderia
cenocepacia J2315]
gi|198037586|emb|CAR53524.1| putative TolQ transport transmembrane protein [Burkholderia
cenocepacia J2315]
gi|325522826|gb|EGD01298.1| putative TolQ transport transmembrane protein [Burkholderia sp.
TJI49]
Length = 225
Score = 215 bits (549), Expect = 3e-54, Method: Composition-based stats.
Identities = 71/221 (32%), Positives = 118/221 (53%), Gaps = 3/221 (1%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
D+SI +L + + + ++ LL + S++SW+ I +K R Q FE+ FWSG
Sbjct: 5 QDLSIISLVLNASVLAQAVMGLLLLLSLMSWTFIFRKWFAIRRARAQTERFEKDFWSGGD 64
Query: 69 LETVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
L+ + +S N+ + L IF S M E+ K+ +K P + D R M + RE++
Sbjct: 65 LQALYQSAANNRHTIGALERIFESGMREFLKAKEKRLSDPGLVLDGARRAMRASFQREMD 124
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV-SIPGIIESLISILLG 185
+ L+FL S+ S +G+ G V G+M F+ +A + PGI E+L++ +G
Sbjct: 125 VLEANLAFLASVGSVSPYIGLFGTVWGIMNSFRGLANVQQATLANVAPGIAEALVATAIG 184
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
L +IP+ +AYN++ D + A++ E F EFS IL RQ +
Sbjct: 185 LFAAIPAVVAYNRYAHDIDRLAIRFETFIEEFSNILQRQAQ 225
>gi|71083299|ref|YP_266018.1| inner membrane protein TolQ [Candidatus Pelagibacter ubique
HTCC1062]
gi|71062412|gb|AAZ21415.1| inner membrane protein TolQ [Candidatus Pelagibacter ubique
HTCC1062]
Length = 224
Score = 215 bits (548), Expect = 4e-54, Method: Composition-based stats.
Identities = 76/222 (34%), Positives = 124/222 (55%), Gaps = 7/222 (3%)
Query: 2 NNYGLAI-MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
GLA D S+++LF++ VK +I +L SI SW+VII+K F + + EFE
Sbjct: 8 QAVGLASNTDFSLWSLFLRADFIVKSVILMLIGCSIYSWAVIIEKFRLFKKINLESEEFE 67
Query: 61 QLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVA 120
+ FW +S E+ SL A +F M K A+S + +RI +++V
Sbjct: 68 EKFWKSKSAESFYNSLPADVENPTALLFKDTMQSLLK-----AKSKTNLNERIASILEVN 122
Query: 121 IARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESL 179
I +++ +I + +FL ++ S +G+ G V G+M FQSIA + ++ + PGI E+L
Sbjct: 123 IEKQISKIDKGFTFLATVGSTAPFIGLFGTVWGIMNSFQSIAISRNTSLAIVAPGIAEAL 182
Query: 180 ISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+ LGL +IP+ +AYNKF DSKK++ ++E F+ F +I+
Sbjct: 183 FATALGLLAAIPAVVAYNKFNNDSKKYSQRLENFSKRFLSII 224
>gi|157964385|ref|YP_001499209.1| hypothetical protein RMA_0432 [Rickettsia massiliae MTU5]
gi|157844161|gb|ABV84662.1| TolQ [Rickettsia massiliae MTU5]
Length = 244
Score = 215 bits (548), Expect = 4e-54, Method: Composition-based stats.
Identities = 75/205 (36%), Positives = 119/205 (58%), Gaps = 3/205 (1%)
Query: 25 KCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGL 84
K ++ +L I SI SW++I+ K + +++ R FE +FWSG LE + +S+K N L
Sbjct: 36 KSVMLMLLIASIWSWAIILDKIFKLVQVQKSMRAFENVFWSGGVLEQLYESIKRSVNNPL 95
Query: 85 AAIFMSAMSEWKKSCDKGARSPI--GIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAG 142
A IF+SAM E K KG + ++RI M +A RE+E++ + LSFL ++ S+
Sbjct: 96 ALIFVSAMDECKSLSTKGLSEGLKNNHKERIMGAMYLAQNREVEKLEKNLSFLATVGSSA 155
Query: 143 LLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIE 201
VG+ G V G+M FQSIA + ++ V PGI E+L++ +GL +IP+ I YN I
Sbjct: 156 PFVGLFGTVWGIMHSFQSIATSNNTSLAVVAPGIAEALLATAIGLFAAIPAVIFYNYLIS 215
Query: 202 DSKKFAMQMEGFANEFSAILSRQTE 226
++E F +E ++ILS+ +
Sbjct: 216 RITLINNKIEDFISELNSILSKAID 240
>gi|170701070|ref|ZP_02892047.1| protein TolQ [Burkholderia ambifaria IOP40-10]
gi|171322374|ref|ZP_02911195.1| protein TolQ [Burkholderia ambifaria MEX-5]
gi|172059757|ref|YP_001807409.1| protein TolQ [Burkholderia ambifaria MC40-6]
gi|170134010|gb|EDT02361.1| protein TolQ [Burkholderia ambifaria IOP40-10]
gi|171092302|gb|EDT37674.1| protein TolQ [Burkholderia ambifaria MEX-5]
gi|171992274|gb|ACB63193.1| protein TolQ [Burkholderia ambifaria MC40-6]
Length = 225
Score = 215 bits (548), Expect = 5e-54, Method: Composition-based stats.
Identities = 71/221 (32%), Positives = 118/221 (53%), Gaps = 3/221 (1%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
D+SI +L + + + ++ LL + S++SW+ I +K R Q FE+ FWSG
Sbjct: 5 QDLSIISLVLNASVLAQAVMGLLLLLSLMSWTFIFRKWFAIRRARAQTERFERDFWSGGD 64
Query: 69 LETVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
L+ + +S N+ + L IF S M E+ K+ +K P + D R M + RE++
Sbjct: 65 LQALYQSAANNRHTIGALERIFESGMREFLKAKEKRLTDPGLVLDGARRAMRASFQREMD 124
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV-SIPGIIESLISILLG 185
+ L+FL S+ S +G+ G V G+M F+ +A + PGI E+L++ +G
Sbjct: 125 VLEANLAFLASVGSVSPYIGLFGTVWGIMNSFRGLANVQQATLANVAPGIAEALVATAIG 184
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
L +IP+ +AYN++ D + A++ E F EFS IL RQ +
Sbjct: 185 LFAAIPAVVAYNRYAHDIDRLAIRFETFIEEFSNILQRQAQ 225
>gi|262193461|ref|YP_003264670.1| protein TolQ [Haliangium ochraceum DSM 14365]
gi|262076808|gb|ACY12777.1| protein TolQ [Haliangium ochraceum DSM 14365]
Length = 232
Score = 215 bits (547), Expect = 5e-54, Method: Composition-based stats.
Identities = 55/220 (25%), Positives = 104/220 (47%), Gaps = 2/220 (0%)
Query: 7 AIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG 66
A + + +L +Q VK ++ LL + SI+ W +I K ++ ++ +F + FW
Sbjct: 10 AAGQLDLASLILQAHWVVKAVMALLALMSIIGWYIIGSKHIHIRRATKESNKFLESFWRT 69
Query: 67 QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSC--DKGARSPIGIQDRIDRMMDVAIARE 124
+ +E + K K N ++A+F++ +E K ++ R + ++R + E
Sbjct: 70 RDIEQIYKQAKGLQNSPISAMFLAGYTELAKLEADERPTRDKEADLENVERALRRTQTIE 129
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILL 184
++ + FL + SA +G+ G V G+M F S+ +N PGI E+L + +
Sbjct: 130 TTKLENMIPFLATTGSAAPFIGLFGTVWGIMNSFTSLGSGAANIQTVAPGIAEALFATAI 189
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
GL +IP+ +AYN F + M F ++ I+ R
Sbjct: 190 GLVAAIPAVMAYNYFTRRIRIQVSHMNTFEQDYLNIIRRH 229
>gi|190575565|ref|YP_001973410.1| putative TolQ transport transmembrane protein [Stenotrophomonas
maltophilia K279a]
gi|190013487|emb|CAQ47122.1| putative TolQ transport transmembrane protein [Stenotrophomonas
maltophilia K279a]
Length = 259
Score = 215 bits (547), Expect = 5e-54, Method: Composition-based stats.
Identities = 70/222 (31%), Positives = 112/222 (50%), Gaps = 4/222 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
I+ L + L VK I+ LL + S +SW +I +K+ F R+ EFE FWSG L
Sbjct: 37 INYLELMAKASLPVKIIVLLLLVGSFVSWVIIFRKARVFKQATREADEFENRFWSGADLG 96
Query: 71 TVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ + + GL AIF + E+ + DK + R M RE++++
Sbjct: 97 KLYSAATDRSRSVTGLEAIFEAGFREYTRLRDKRRLDGRAQLEGAQRAMRTTYTREVDQL 156
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGL 186
L L ++ S VG++G V G+M + +G + PGI E+L + +GL
Sbjct: 157 ERNLELLANIGSTAPYVGLVGTVFGIMVTMHDMISSGAQAGIAAVAPGISEALFATAIGL 216
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
V+IP+ AYN+F ++ +++ E FA EFS+IL RQ+ G+
Sbjct: 217 FVAIPAVWAYNRFTTRVERMSVRFETFAEEFSSILQRQSAGD 258
>gi|319943005|ref|ZP_08017288.1| TolQ colicin import protein [Lautropia mirabilis ATCC 51599]
gi|319743547|gb|EFV95951.1| TolQ colicin import protein [Lautropia mirabilis ATCC 51599]
Length = 230
Score = 215 bits (547), Expect = 6e-54, Method: Composition-based stats.
Identities = 63/230 (27%), Positives = 113/230 (49%), Gaps = 9/230 (3%)
Query: 6 LAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS 65
+ D+SI ++ L + ++ LL + S++SW++I +K +R FE+ FW
Sbjct: 1 MNAHDLSILSMISDASLLAQAVMALLLVISLVSWTIIFRKLFAIKAAQRATNRFEEKFWQ 60
Query: 66 GQSLETVCKSL--KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIG------IQDRIDRMM 117
G L + + + + +A IF + M E++++ G G + R M
Sbjct: 61 GAELNALYQEVSHASKDPGPMARIFEAGMKEFRRARQNGITGNGGPESSNIVLAPASRAM 120
Query: 118 DVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV-SIPGII 176
A RE++ + L+FL S S +G+ G V G+M F+ +A + PGI
Sbjct: 121 RAAFQREMDALESSLAFLASAGSVSPYIGLFGTVWGIMNAFRGLADVQQATLASVAPGIA 180
Query: 177 ESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
E+L++ +GL +IP+ +AYN++ + ++ A + E F +EFS IL R
Sbjct: 181 EALVATAIGLFAAIPAVVAYNRYAYEIERLANRFETFIDEFSNILDRHAR 230
>gi|167586276|ref|ZP_02378664.1| MotA/TolQ/ExbB proton channel [Burkholderia ubonensis Bu]
Length = 225
Score = 215 bits (547), Expect = 6e-54, Method: Composition-based stats.
Identities = 71/221 (32%), Positives = 118/221 (53%), Gaps = 3/221 (1%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
D+SI +L + + + ++ LL + S++SW+ I +K R Q FE+ FWSG
Sbjct: 5 QDLSIISLVLNASVLAQAVMGLLLLLSLMSWTFIFRKWFAIRRARAQTERFERDFWSGGD 64
Query: 69 LETVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
L+ + +S N+ + L IF S M E+ K+ +K P + D R M + RE++
Sbjct: 65 LQALYQSAANNRHTIGALERIFESGMREFLKAKEKRISDPGLVLDGARRAMRASFQREMD 124
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV-SIPGIIESLISILLG 185
+ L+FL S+ S +G+ G V G+M F+ +A + PGI E+L++ +G
Sbjct: 125 VLEANLAFLASVGSVSPYIGLFGTVWGIMNSFRGLANVQQATLANVAPGIAEALVATAIG 184
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
L +IP+ +AYN++ D + A++ E F EFS IL RQ +
Sbjct: 185 LFAAIPAVVAYNRYAHDIDRLAIRFETFIEEFSNILQRQAQ 225
>gi|148555051|ref|YP_001262633.1| Tol-Pal system, TolQ [Sphingomonas wittichii RW1]
gi|148500241|gb|ABQ68495.1| Tol-Pal system, TolQ [Sphingomonas wittichii RW1]
Length = 232
Score = 214 bits (546), Expect = 6e-54, Method: Composition-based stats.
Identities = 63/218 (28%), Positives = 112/218 (51%), Gaps = 3/218 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+S ALF+Q + VK ++ L + S+ +W++I+ S+ R + FE FW + ++
Sbjct: 14 LSPIALFLQADIVVKAVMIGLLLASVWTWTIIVSGSMALTRAFRASKGFETDFWKSEDID 73
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGA-RSPIGIQDRIDRMMDVAIARELEEIT 129
+ +I A +F + ++EW++S G G + R+ M A E++ ++
Sbjct: 74 KFYEG-PGRQDIPAAKVFSAGVAEWRRSVRNGQPVDRDGTRARLSNAMAAAAGAEIDRLS 132
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCV 188
++L+ L ++ S VG+ G V G+M F IA + ++ V PGI E+L + LGL
Sbjct: 133 DRLNILATVGSVAPFVGLFGTVWGIMRSFTDIAASQNTSLGVVAPGIAEALFATALGLFA 192
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ IAYN+ + K Q+ F + LSR+ E
Sbjct: 193 AIPAVIAYNRLLHRVSKIEGQLHRFGDAIHMTLSRELE 230
>gi|16127463|ref|NP_422027.1| MotA/TolQ/ExbB proton channel family protein [Caulobacter
crescentus CB15]
gi|221236276|ref|YP_002518713.1| TolQ protein [Caulobacter crescentus NA1000]
gi|13424917|gb|AAK25195.1| MotA/TolQ/ExbB proton channel family protein [Caulobacter
crescentus CB15]
gi|220965449|gb|ACL96805.1| TolQ protein [Caulobacter crescentus NA1000]
Length = 232
Score = 214 bits (546), Expect = 6e-54, Method: Composition-based stats.
Identities = 81/227 (35%), Positives = 125/227 (55%), Gaps = 4/227 (1%)
Query: 7 AIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG 66
A + S FALFMQ VK ++ L + S+ SW+VI+ K F L R FE+ G
Sbjct: 6 AAPNFSFFALFMQADWVVKSVMIGLILASLGSWAVILDKLFRFQALNRAANRFEEQVSGG 65
Query: 67 QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIG---IQDRIDRMMDVAIAR 123
+SLE V + L + +A+ EW+ + KGA S + RIDR++D IAR
Sbjct: 66 RSLEDVAGEAGANPRHALPRMLQAALKEWRDAKSKGAMSETQAGFLIARIDRILDTQIAR 125
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISI 182
E ++ E L L +++A +G+ G V G+M FQ+IA + ++ V P I E+L +
Sbjct: 126 ETTKVEEGLGSLAIVATASPFIGLFGTVWGIMHAFQNIALSKNTSLAVVAPSIAEALFAT 185
Query: 183 LLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNI 229
+GL +IP+ IAYNKF D+ K+A ++EGFA++ S + R+ +
Sbjct: 186 AIGLIAAIPAYIAYNKFSTDAGKYAGRLEGFADDLSTAIQRRLAERV 232
>gi|91762271|ref|ZP_01264236.1| inner membrane protein TolQ [Candidatus Pelagibacter ubique
HTCC1002]
gi|91718073|gb|EAS84723.1| inner membrane protein TolQ [Candidatus Pelagibacter ubique
HTCC1002]
Length = 224
Score = 214 bits (546), Expect = 7e-54, Method: Composition-based stats.
Identities = 75/222 (33%), Positives = 124/222 (55%), Gaps = 7/222 (3%)
Query: 2 NNYGLAI-MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
GLA D S+++LF++ VK +I +L SI SW+VII+K F + + EFE
Sbjct: 8 QAVGLASNTDFSLWSLFLRADFIVKSVILMLIGCSIYSWAVIIEKFRLFKKINLESEEFE 67
Query: 61 QLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVA 120
+ FW +S E+ SL A +F M K A+S + +R+ +++V
Sbjct: 68 EKFWKSKSAESFYNSLPADVENPTALLFKDTMQSLLK-----AKSKTNLNERMASILEVN 122
Query: 121 IARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESL 179
I +++ +I + +FL ++ S +G+ G V G+M FQSIA + ++ + PGI E+L
Sbjct: 123 IEKQISKIDKGFTFLATVGSTAPFIGLFGTVWGIMNSFQSIAISRNTSLAIVAPGIAEAL 182
Query: 180 ISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+ LGL +IP+ +AYNKF DSKK++ ++E F+ F +I+
Sbjct: 183 FATALGLLAAIPAVVAYNKFNNDSKKYSQRLENFSKRFLSII 224
>gi|254469020|ref|ZP_05082426.1| protein TolQ [beta proteobacterium KB13]
gi|207087830|gb|EDZ65113.1| protein TolQ [beta proteobacterium KB13]
Length = 223
Score = 214 bits (546), Expect = 7e-54, Method: Composition-based stats.
Identities = 65/219 (29%), Positives = 105/219 (47%), Gaps = 4/219 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S +L M + V+ ++ +L S+ SW I K EFE+ FW+G
Sbjct: 6 DLSFLSLVMGASIPVQLVMLILIAASVFSWKYIFIKIKTIKNAEEHATEFEKYFWAGAQF 65
Query: 70 ETVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + +S + N GL +IF + E+ S ++ I R M VA REL+
Sbjct: 66 KQLYESASHSSNNVGGLKSIFFAGYKEFIASTKDQKLDKQS-KESIRRAMQVAYNRELDS 124
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV-SIPGIIESLISILLGL 186
+ L FL S+ S +G+ G V G+M F ++ + + PGI E+LI+ +GL
Sbjct: 125 LERHLPFLASVGSVSPYIGLFGTVWGIMNSFIGLSNVAQSTLAQVAPGIAEALIATAIGL 184
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ IAYN+F + A++ E F EF + R+
Sbjct: 185 FAAIPAVIAYNRFAAKVDRLAIRYESFMEEFINNVDRRA 223
>gi|224823452|ref|ZP_03696561.1| protein TolQ [Lutiella nitroferrum 2002]
gi|224603907|gb|EEG10081.1| protein TolQ [Lutiella nitroferrum 2002]
Length = 216
Score = 214 bits (546), Expect = 7e-54, Method: Composition-based stats.
Identities = 66/212 (31%), Positives = 104/212 (49%), Gaps = 2/212 (0%)
Query: 14 FALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVC 73
+L + L V+ ++ L + S+LSW++II K + RR FEQ FW G L +
Sbjct: 1 MSLILNASLVVQLVMLGLALLSVLSWTLIISKLGTLRSARRHSESFEQNFWGGTDLNRLY 60
Query: 74 KSLKNHHNI-GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKL 132
+ + + G+ IF S +E+ K + I D R M A REL+ +
Sbjct: 61 EDARQQGDTVGMERIFQSGFAEFLKQRGRSGAELSDIMDGARRAMRAAAQRELDRLDSHT 120
Query: 133 SFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIP 191
SFL ++ S +G+ G V G+M F + + PGI E+L++ +GL +IP
Sbjct: 121 SFLATVGSVSPYIGLFGTVWGIMHAFIGLGNAGQATLSTVAPGIAEALVATAIGLFAAIP 180
Query: 192 SSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
+ +AYN+F D + A + + F EFS IL R
Sbjct: 181 AVVAYNRFAADVDRLASRFDTFMEEFSNILQR 212
>gi|87118955|ref|ZP_01074853.1| TolQ protein [Marinomonas sp. MED121]
gi|86165346|gb|EAQ66613.1| TolQ protein [Marinomonas sp. MED121]
Length = 226
Score = 214 bits (545), Expect = 1e-53, Method: Composition-based stats.
Identities = 72/221 (32%), Positives = 115/221 (52%), Gaps = 3/221 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+SI+ L L V+ ++ LL S+ SW VI Q+ ++ R FE LFWSG L
Sbjct: 1 MSIWGLIASASLVVQLVMLLLASASVFSWVVIFQRIRVLRNAKKVRRTFEDLFWSGMDLS 60
Query: 71 TVCKS--LKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ + + G+ IF + + E+ + P + + + R M VA+ARE E++
Sbjct: 61 QLYRQITAEGRRIEGIENIFTAGIKEFTRLRQSANMDPDAVMEGVQRSMRVALAREEEKL 120
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLC 187
+ L FL ++ S VG+ G V G+M F +A + ++ PGI E+LI+ +GL
Sbjct: 121 DQHLPFLATVGSTSPYVGLFGTVWGIMHSFIGLAEVQQATLATVAPGIAEALIATAIGLL 180
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
+IP+ I YN+F S A+ E F++EFS+IL R+ G
Sbjct: 181 AAIPAVICYNRFSATSDALAINYETFSDEFSSILHRKVHGR 221
>gi|330445538|ref|ZP_08309190.1| protein TolQ [Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
gi|328489729|dbj|GAA03687.1| protein TolQ [Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
Length = 210
Score = 213 bits (544), Expect = 1e-53, Method: Composition-based stats.
Identities = 58/202 (28%), Positives = 101/202 (50%), Gaps = 3/202 (1%)
Query: 27 IITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHN--IGL 84
++ +L SI SW++II++S R+ +FE FWSG L + K ++ + G
Sbjct: 2 VMLILLGMSIASWAMIIKRSQVLSEASRKAAQFEDRFWSGVDLSQLYKEVQGRKDELTGS 61
Query: 85 AAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLL 144
IF S E+ + + P + + R M V++++E++E+ L FL ++ S
Sbjct: 62 EQIFYSGFKEFARLHRSNDKVPEAVMEGTGRAMRVSLSKEVDELETSLPFLATVGSISPY 121
Query: 145 VGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCVSIPSSIAYNKFIEDS 203
+G+ G V G+M F ++ + + PGI E+L++ +GL +IP+ + YN+
Sbjct: 122 IGLFGTVWGIMTAFIALGAVKQATLAMVAPGIAEALVATAMGLFAAIPAVMFYNRLTNKV 181
Query: 204 KKFAMQMEGFANEFSAILSRQT 225
K F EFS+IL RQ
Sbjct: 182 AKLEHTYATFMEEFSSILHRQA 203
>gi|328953810|ref|YP_004371144.1| protein TolQ [Desulfobacca acetoxidans DSM 11109]
gi|328454134|gb|AEB09963.1| protein TolQ [Desulfobacca acetoxidans DSM 11109]
Length = 263
Score = 213 bits (544), Expect = 1e-53, Method: Composition-based stats.
Identities = 62/229 (27%), Positives = 109/229 (47%), Gaps = 14/229 (6%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+ + L + G VK ++ +L +FS+ W +I K ++Q EF LFW ++L
Sbjct: 25 DLDVVPLILNAGPVVKGVMFILLVFSVACWGIIFAKVFQLSRAKKQTAEFLDLFWGARNL 84
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKK------SCDKGARSPIGIQ-------DRIDRM 116
T ++ +AAIF E K S D G R +G + ++R
Sbjct: 85 STAYHETRHLQASPVAAIFRLGYIELGKLMQTQVSTDSGDRDVLGTIAVRGAGVENVNRS 144
Query: 117 MDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGI 175
+ A+ E ++ ++FL + + +G+ G V G+M F+ I S ++ V PGI
Sbjct: 145 LRRAMNTETTRLSRAITFLATTGNTAPFIGLFGTVWGIMTSFRGIGLKGSASLAVVAPGI 204
Query: 176 IESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
E+L++ +GL +IP+ +AYN F+ + +M F ++F I+ R
Sbjct: 205 SEALVATAVGLAAAIPAVVAYNYFLSKVRVLETEMASFISDFLNIIERD 253
>gi|114771189|ref|ZP_01448609.1| Biopolymer transport protein, TolQ [alpha proteobacterium HTCC2255]
gi|114548114|gb|EAU51001.1| Biopolymer transport protein, TolQ [alpha proteobacterium HTCC2255]
Length = 230
Score = 213 bits (544), Expect = 1e-53, Method: Composition-based stats.
Identities = 87/219 (39%), Positives = 130/219 (59%), Gaps = 2/219 (0%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
+D S+ AL+++ VK ++ +L SI SWS+IIQK +N+ R+ F++ FWSG
Sbjct: 12 IDFSVLALYLRATFTVKIVMLMLIFSSIWSWSIIIQKFINYRKARKNAHLFDKAFWSGAP 71
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
L+ + + + + IF++AMSEW++S +G G Q RIDR MDVAIARE E +
Sbjct: 72 LDQLYERVGSDPTGASEKIFVAAMSEWERSH-RGEDLIGGAQQRIDRSMDVAIARESEIL 130
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
L+FL ++ S +G+ G V G+ F+ IA + N+ V PGI E+L++ LGL
Sbjct: 131 NNGLTFLATVGSTAPFIGLFGTVWGIKNAFEEIAIQQNTNLAVVAPGIAEALVATALGLL 190
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ I YNK D+ + E FA+EFS ILSRQ +
Sbjct: 191 AAIPAVIFYNKLSADADRLVGGYESFADEFSTILSRQLD 229
>gi|289661904|ref|ZP_06483485.1| TolQ protein [Xanthomonas campestris pv. vasculorum NCPPB702]
gi|289666995|ref|ZP_06488070.1| TolQ protein [Xanthomonas campestris pv. musacearum NCPPB4381]
Length = 259
Score = 213 bits (544), Expect = 1e-53, Method: Composition-based stats.
Identities = 69/222 (31%), Positives = 114/222 (51%), Gaps = 4/222 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
I+ L ++ + VK I+ LL I S +SW +I +K+ F R+ EFE FWSG L
Sbjct: 37 INYVDLILRASIPVKIIVLLLLIGSFISWVIIFRKARAFKQANREADEFENRFWSGADLA 96
Query: 71 TVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ S + + GL ++F S E+ + D+ + R M A RE++++
Sbjct: 97 KLYASATDRNRTVGGLESMFESGFREFSRLRDRRRLDARVQLEGAQRAMRTAFTREVDQL 156
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGL 186
L L ++ S VG++G V G+M + +G + PGI E+L + +GL
Sbjct: 157 ERNLELLANIGSTAPYVGLVGTVFGIMVTMHDMVSSGEQAGIAAVAPGISEALFATAIGL 216
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
V+IP+ AYN+F ++ +++ E FA+EFS+IL RQ +
Sbjct: 217 FVAIPAVWAYNRFTTRVERLSVRYETFADEFSSILQRQVGAD 258
>gi|51246261|ref|YP_066145.1| biopolymer transport protein TolQ [Desulfotalea psychrophila LSv54]
gi|50877298|emb|CAG37138.1| related to biopolymer transport protein (TolQ) [Desulfotalea
psychrophila LSv54]
Length = 232
Score = 213 bits (544), Expect = 1e-53, Method: Composition-based stats.
Identities = 63/230 (27%), Positives = 109/230 (47%), Gaps = 10/230 (4%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
MD+SI + + G VK ++ +L +FS+ SW++++ K +RR +F FW +
Sbjct: 1 MDLSITHMILSAGPMVKFVMLVLLVFSVSSWTIVLMKWALLRNIRRDSEDFLDSFWGSPN 60
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKK-----SCDKGARSPIGIQ----DRIDRMMDV 119
L K + AA+F + +E +K S + + P+G+Q D + R +
Sbjct: 61 LNEAYKEVNQFPYSSEAAVFSAGFTELQKITKIQSSKEESNQPLGMQMAAMDNLKRAVRK 120
Query: 120 AIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIES 178
A ++ E + L FL + SA +G+ G V G+M F I S ++ V PGI E+
Sbjct: 121 AETQKFNEFNKALPFLATTGSASPFIGLFGTVWGIMTSFHQIGQQGSASLAVVAPGISEA 180
Query: 179 LISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
L+ GL V+IP+ + +N F + + F +F ++ R G
Sbjct: 181 LVVTAAGLFVAIPAVVTFNYFSHKFDQADAAAQHFTTDFLNLIERDLLGR 230
>gi|262165951|ref|ZP_06033688.1| MotA/TolQ/ExbB proton channel family protein [Vibrio mimicus VM223]
gi|262025667|gb|EEY44335.1| MotA/TolQ/ExbB proton channel family protein [Vibrio mimicus VM223]
Length = 208
Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats.
Identities = 58/202 (28%), Positives = 99/202 (49%), Gaps = 3/202 (1%)
Query: 27 IITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNI--GL 84
++ L S+ SW+ II++S ++ FE FWSG L + + +K + G+
Sbjct: 2 VMLTLLGMSVASWAAIIKRSKVISAAEKEADTFEDRFWSGIDLGALYQDVKKRKDDIYGI 61
Query: 85 AAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLL 144
IF + +E+ + +P + + R M VA+ARE++ + L FL ++ S
Sbjct: 62 EEIFYAGFTEFARLRKTNPSAPDFVMEGTGRAMRVAVAREVDSLETSLPFLATVGSISPY 121
Query: 145 VGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCVSIPSSIAYNKFIEDS 203
+G+ G V G+M F ++ + + PGI E+LI+ +GL +IP+ +AYN+
Sbjct: 122 IGLFGTVWGIMHAFIALGEVKQATLAMVAPGIAEALIATAIGLFAAIPAVMAYNRLSNKV 181
Query: 204 KKFAMQMEGFANEFSAILSRQT 225
K F+ EF IL RQ
Sbjct: 182 SKLEHNYATFSEEFHTILHRQA 203
>gi|21243871|ref|NP_643453.1| TolQ protein [Xanthomonas axonopodis pv. citri str. 306]
gi|294626859|ref|ZP_06705451.1| TolQ protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB
11122]
gi|294665408|ref|ZP_06730696.1| TolQ protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB
10535]
gi|21109472|gb|AAM37989.1| TolQ protein [Xanthomonas axonopodis pv. citri str. 306]
gi|292598873|gb|EFF43018.1| TolQ protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB
11122]
gi|292604819|gb|EFF48182.1| TolQ protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB
10535]
Length = 259
Score = 213 bits (543), Expect = 2e-53, Method: Composition-based stats.
Identities = 69/222 (31%), Positives = 114/222 (51%), Gaps = 4/222 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
I+ L ++ + VK I+ LL I S +SW +I +K+ F R+ EFE FWSG L
Sbjct: 37 INYVDLILRASIPVKIIVLLLLIGSFISWVIIFRKARAFKQANREADEFENRFWSGADLA 96
Query: 71 TVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ S + + GL ++F S E+ + D+ + R M A RE++++
Sbjct: 97 KLYASATDRNRTVGGLESMFESGFREFSRLRDRRRLDARVQLEGAQRAMRTAFTREVDQL 156
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGL 186
L L ++ S VG++G V G+M + +G + PGI E+L + +GL
Sbjct: 157 ERNLELLANIGSTAPYVGLVGTVFGIMVTMHDMVSSGEQAGIAAVAPGISEALFATAIGL 216
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
V+IP+ AYN+F ++ +++ E FA+EFS+IL RQ +
Sbjct: 217 FVAIPAVWAYNRFTTRVERLSVRYETFADEFSSILQRQAGAD 258
>gi|85374733|ref|YP_458795.1| TolQ, tolQ protein [Erythrobacter litoralis HTCC2594]
gi|84787816|gb|ABC63998.1| TolQ, tolQ protein [Erythrobacter litoralis HTCC2594]
Length = 234
Score = 213 bits (543), Expect = 2e-53, Method: Composition-based stats.
Identities = 69/223 (30%), Positives = 114/223 (51%), Gaps = 2/223 (0%)
Query: 5 GLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFW 64
G A + LF+ + V+ ++ L + SI SW +I+ S+ R + FE+ W
Sbjct: 11 GEATGRLDPLQLFLDADIVVQAVMIGLILASIWSWMIIVSFSMRLSGARSRSARFEKDLW 70
Query: 65 SGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARE 124
+++ +N ++ A I AM+EWK+S KG + +RI M +A E
Sbjct: 71 QADDFDSIMGKYQN-KDVPSARIAGVAMTEWKRSTSKGLKDREAASNRIAAAMGGQVAEE 129
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISIL 183
+ + +L+FL + S VG+ G V G+M F I S+++ V PGI E+L +
Sbjct: 130 ADTLAARLNFLATTGSVAPFVGLFGTVWGIMNSFFQIGVQESSSLAVVAPGISEALFATA 189
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+GL +IP+ IAYN+F F +++ FA++F A LSR+ E
Sbjct: 190 IGLFAAIPAVIAYNRFSSKVNIFEARLQRFADKFHANLSRELE 232
>gi|149202849|ref|ZP_01879820.1| MotA/TolQ/ExbB proton channel [Roseovarius sp. TM1035]
gi|149143395|gb|EDM31431.1| MotA/TolQ/ExbB proton channel [Roseovarius sp. TM1035]
Length = 231
Score = 213 bits (543), Expect = 2e-53, Method: Composition-based stats.
Identities = 79/219 (36%), Positives = 122/219 (55%), Gaps = 1/219 (0%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
+D S++ALF + L VK ++ +L + S +WS+IIQK + + + + F++ FWSG+
Sbjct: 12 IDFSMWALFARATLTVKLVMFMLIVSSFWAWSIIIQKIIIYRKAQLEAEIFDRRFWSGEP 71
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
L+ + + IF + M+EW++S G RIDR MDVAIA+E E +
Sbjct: 72 LDGLFDEIGPEPAGQSERIFAAGMTEWRRSHRNDGNLIAGATARIDRSMDVAIAKESEGL 131
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
L L ++ S +G+ G V G+M F IA + N+ V PGI E+L++ LGL
Sbjct: 132 QSGLQVLATVGSTAPFIGLFGTVWGIMHAFVEIAEQQNTNLAVVAPGIAEALLATGLGLI 191
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ I YNK D+ + E FA+EF+ ILSRQ +
Sbjct: 192 AAIPAVIFYNKLSADADRIVAGYEAFADEFATILSRQLD 230
>gi|295688120|ref|YP_003591813.1| protein TolQ [Caulobacter segnis ATCC 21756]
gi|295430023|gb|ADG09195.1| protein TolQ [Caulobacter segnis ATCC 21756]
Length = 231
Score = 213 bits (543), Expect = 2e-53, Method: Composition-based stats.
Identities = 77/222 (34%), Positives = 122/222 (54%), Gaps = 3/222 (1%)
Query: 7 AIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG 66
A + S FALFMQ VK ++ L + S+ SW+VI+ K F L R FE+ G
Sbjct: 6 AAPNFSFFALFMQADWVVKGVMIGLILASLGSWAVILDKLFRFTNLNRAADRFEEQVSGG 65
Query: 67 QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIG--IQDRIDRMMDVAIARE 124
+SLE V + L + +A+ EW+++ + + RIDR++D IARE
Sbjct: 66 RSLEDVAGEAGANPPHALPRMLQAALKEWREAKTRAMTENQTAFLVARIDRILDTMIARE 125
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISIL 183
++ E L L +++A +G+ G V G+M FQ+IA + ++ V P I E+L +
Sbjct: 126 TAKVEEGLGSLAIVATASPFIGLFGTVWGIMHAFQNIALSKNTSLAVVAPSIAEALFATA 185
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+GL +IP+ IAYNKF D+ K+A ++EGFA++ S + R+
Sbjct: 186 VGLIAAIPAYIAYNKFSTDAGKYAGRLEGFADDLSTAIQRRL 227
>gi|229593364|ref|YP_002875483.1| biopolymer transport membrane protein [Pseudomonas fluorescens
SBW25]
gi|229365230|emb|CAY53532.1| biopolymer transport membrane protein [Pseudomonas fluorescens
SBW25]
Length = 322
Score = 213 bits (543), Expect = 2e-53, Method: Composition-based stats.
Identities = 57/226 (25%), Positives = 105/226 (46%), Gaps = 5/226 (2%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N G+A D+S + ++ + VK ++ L I SI++W++ I K + +R+ R
Sbjct: 85 NTLGMA-HDLSPWGMYQNADVVVKAVMIGLAIASIITWTIWIAKGFELLGAKRRLRNEIV 143
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
+L+ +S + + A+ E + S AR GI++R+ ++ +
Sbjct: 144 HLKKATTLKEASESATKKGTLANT-LVHDALEEMRLSA--NAREKEGIKERVAFRLERLV 200
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLI 180
A ++ L ++ S VG+ G V G+M F IA + N+ V PGI E+L+
Sbjct: 201 AACGRNMSSGTGVLATIGSTAPFVGLFGTVWGIMNSFIGIAKTQTTNLAVVAPGIAEALL 260
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+ LGL +IP+ + YN F + Q+ + E ++SR +
Sbjct: 261 ATALGLVAAIPAVVIYNVFARSIAGYKAQVSDASAEVLLLVSRDLD 306
>gi|194366894|ref|YP_002029504.1| protein TolQ [Stenotrophomonas maltophilia R551-3]
gi|194349698|gb|ACF52821.1| protein TolQ [Stenotrophomonas maltophilia R551-3]
Length = 259
Score = 213 bits (543), Expect = 2e-53, Method: Composition-based stats.
Identities = 70/222 (31%), Positives = 111/222 (50%), Gaps = 4/222 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
I+ L + L VK I+ L + S +SW +I +K+ F R+ EFE FWSG L
Sbjct: 37 INYLELMAKASLPVKIIVLALLVGSFVSWVIIFRKARIFKQATREADEFENRFWSGADLG 96
Query: 71 TVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ S + GL AIF + E+ + DK + R M RE++++
Sbjct: 97 KLYSSATDRSRNVGGLEAIFEAGFREYSRLRDKRRLDGRAQLEGAQRAMRTTYTREVDQL 156
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGL 186
L L ++ S VG++G V G+M + +G + PGI E+L + +GL
Sbjct: 157 ERNLELLANIGSTAPYVGLVGTVFGIMVTMHDMISSGAQAGIAAVAPGISEALFATAIGL 216
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
V+IP+ AYN+F ++ +++ E FA EFS+IL RQ+ G+
Sbjct: 217 FVAIPAVWAYNRFTTRVERMSVRFETFAEEFSSILQRQSAGD 258
>gi|325917787|ref|ZP_08179971.1| Cell division and transport-associated protein TolQ (TC 2.C.1.2.1)
[Xanthomonas vesicatoria ATCC 35937]
gi|325536003|gb|EGD07815.1| Cell division and transport-associated protein TolQ (TC 2.C.1.2.1)
[Xanthomonas vesicatoria ATCC 35937]
Length = 259
Score = 213 bits (543), Expect = 2e-53, Method: Composition-based stats.
Identities = 69/222 (31%), Positives = 114/222 (51%), Gaps = 4/222 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
I+ L ++ + VK I+ LL I S +SW +I +K+ F R+ EFE FWSG L
Sbjct: 37 INYVDLILRASIPVKIIVLLLLIGSFISWVIIFRKARAFKQANREADEFENRFWSGADLA 96
Query: 71 TVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ S + + GL ++F S E+ + D+ + R M A RE++++
Sbjct: 97 KLYASATDRNRTVGGLESMFESGFREFSRLRDRRRLDARVQLEGAQRAMRTAFTREVDQL 156
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGL 186
L L ++ S VG++G V G+M + +G + PGI E+L + +GL
Sbjct: 157 ERNLELLANIGSTAPYVGLVGTVFGIMVTMHDMVSSGEQAGIAAVAPGISEALFATAIGL 216
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
V+IP+ AYN+F ++ +++ E FA+EFS+IL RQ +
Sbjct: 217 FVAIPAVWAYNRFTTRVERLSVRYETFADEFSSILQRQAGAD 258
>gi|312963866|ref|ZP_07778337.1| TonB system transport protein [Pseudomonas fluorescens WH6]
gi|311281901|gb|EFQ60511.1| TonB system transport protein [Pseudomonas fluorescens WH6]
Length = 325
Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats.
Identities = 56/230 (24%), Positives = 105/230 (45%), Gaps = 5/230 (2%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N G+A D+S + ++ + VK ++ L I SI++W++ I K + +R+ R
Sbjct: 88 NTLGMA-HDLSPWGMYQNADVVVKAVMIGLAIASIITWTIWIAKGFELLGAKRRLRTEIV 146
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
+L+ ++ + + A+ E + S R GI++R+ ++ +
Sbjct: 147 HLKKATTLKEASETATKKGTLA-NLLVHDALEEMRLSA--NTREKEGIKERVSFRLERLV 203
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLI 180
A ++ L ++ S VG+ G V G+M F IA + N+ V PGI E+L+
Sbjct: 204 AACGRNMSSGTGVLATIGSTAPFVGLFGTVWGIMNSFIGIAKTQTTNLAVVAPGIAEALL 263
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
+ LGL +IP+ + YN F + Q+ + E ++SR + S
Sbjct: 264 ATALGLVAAIPAVVIYNVFARSIAGYKAQVSDASAEVLLLVSRDLDHQPS 313
>gi|325923400|ref|ZP_08185065.1| Cell division and transport-associated protein TolQ (TC 2.C.1.2.1)
[Xanthomonas gardneri ATCC 19865]
gi|325546115|gb|EGD17304.1| Cell division and transport-associated protein TolQ (TC 2.C.1.2.1)
[Xanthomonas gardneri ATCC 19865]
Length = 259
Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats.
Identities = 69/222 (31%), Positives = 114/222 (51%), Gaps = 4/222 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
I+ L ++ + VK I+ LL I S +SW +I +K+ F R+ EFE FWSG L
Sbjct: 37 INYVELILRASIPVKIIVLLLLIGSFISWVIIFRKARAFKQANREADEFENRFWSGADLA 96
Query: 71 TVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ S + + GL ++F S E+ + D+ + R M A RE++++
Sbjct: 97 KLYASATDRNRTVGGLESMFESGFREFSRLRDRRRLDGRVQLEGAQRAMRTAFTREVDQL 156
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGL 186
L L ++ S VG++G V G+M + +G + PGI E+L + +GL
Sbjct: 157 ERNLELLANIGSTAPYVGLVGTVFGIMVTMHDMVSSGEQAGIAAVAPGISEALFATAIGL 216
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
V+IP+ AYN+F ++ +++ E FA+EFS+IL RQ +
Sbjct: 217 FVAIPAVWAYNRFTTRVERLSVRYETFADEFSSILQRQAGAD 258
>gi|229508064|ref|ZP_04397569.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae BX
330286]
gi|229511697|ref|ZP_04401176.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae B33]
gi|229518836|ref|ZP_04408279.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae RC9]
gi|229607625|ref|YP_002878273.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae
MJ-1236]
gi|229343525|gb|EEO08500.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae RC9]
gi|229351662|gb|EEO16603.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae B33]
gi|229355569|gb|EEO20490.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae BX
330286]
gi|229370280|gb|ACQ60703.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae
MJ-1236]
Length = 208
Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats.
Identities = 59/202 (29%), Positives = 99/202 (49%), Gaps = 3/202 (1%)
Query: 27 IITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNI--GL 84
++ L S+ SW+ II++S R+ FE FWSG L + + +K + G+
Sbjct: 2 VMLTLLGMSVASWAAIIKRSKVISAAEREADTFEDRFWSGMDLGALYQDVKKRKDDIYGI 61
Query: 85 AAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLL 144
IF + +E+ + +P + + R M VA+ARE++ + L FL ++ S
Sbjct: 62 EEIFYAGFTEFARLRKTNPGAPDFVMEGTGRAMRVAVAREVDSLETSLPFLATVGSISPY 121
Query: 145 VGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCVSIPSSIAYNKFIEDS 203
+G+ G V G+M F ++ + + PGI E+LI+ +GL +IP+ +AYN+
Sbjct: 122 IGLFGTVWGIMHAFIALGEVKQATLAMVAPGIAEALIATAIGLFAAIPAVMAYNRLSNKV 181
Query: 204 KKFAMQMEGFANEFSAILSRQT 225
K F+ EF IL RQ
Sbjct: 182 SKLEHTYATFSEEFHTILHRQV 203
>gi|229515219|ref|ZP_04404679.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae TMA
21]
gi|229347924|gb|EEO12883.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae TMA
21]
Length = 208
Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats.
Identities = 59/202 (29%), Positives = 100/202 (49%), Gaps = 3/202 (1%)
Query: 27 IITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNI--GL 84
++ L S+ SW+ II++S R+ FE FWSG L ++ + +K + G+
Sbjct: 2 VMLTLLGMSVASWAAIIKRSKVISAAEREADTFEDRFWSGMDLGSLYQDVKKRKDDIYGI 61
Query: 85 AAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLL 144
IF + +E+ + +P + + R M VA+ARE++ + L FL ++ S
Sbjct: 62 EEIFYAGFTEFARLRKTNPGAPDFVMEGTGRAMRVAVAREVDSLETSLPFLATVGSISPY 121
Query: 145 VGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCVSIPSSIAYNKFIEDS 203
+G+ G V G+M F ++ + + PGI E+LI+ +GL +IP+ +AYN+
Sbjct: 122 IGLFGTVWGIMHAFIALGEVKQATLAMVAPGIAEALIATAIGLFAAIPAVMAYNRLSNKV 181
Query: 204 KKFAMQMEGFANEFSAILSRQT 225
K F+ EF IL RQ
Sbjct: 182 SKLEHTYATFSEEFHTILHRQA 203
>gi|188532604|ref|YP_001906401.1| biopolymer transport protein ExbB [Erwinia tasmaniensis Et1/99]
gi|188027646|emb|CAO95496.1| Biopolymer transport ExbB protein [Erwinia tasmaniensis Et1/99]
Length = 244
Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats.
Identities = 54/223 (24%), Positives = 111/223 (49%), Gaps = 4/223 (1%)
Query: 6 LAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS 65
L MD+S++ ++ + VK ++ L + S+++W++ KS+ R++ + + L +
Sbjct: 5 LMQMDLSVWGMYQHADIVVKAVMIGLLLASVVTWAIFFSKSIELSRARKRLKREQALLAN 64
Query: 66 GQSLETVCKSLKNHHNIGLAAIFMS-AMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARE 124
+SLE + + H+ L+++ +S A++E + S G+ GI++R ++ +A
Sbjct: 65 ARSLENAAQVCEGFHHQSLSSLLVSEAVNELELSV--GSDDNNGIKERTAFRLERRVAAI 122
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISIL 183
FL ++ + +G+ G V G+M F IA + N+ V PGI E+L++
Sbjct: 123 SRHAGRGNGFLATIGAVAPFIGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGIAEALLATA 182
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+GL +IP+ + YN F + + A + + SR +
Sbjct: 183 IGLVAAIPAVVIYNVFARTIGSYKASLGDVAAQVLLLQSRDLD 225
>gi|188577431|ref|YP_001914360.1| protein TolQ [Xanthomonas oryzae pv. oryzae PXO99A]
gi|188521883|gb|ACD59828.1| protein TolQ [Xanthomonas oryzae pv. oryzae PXO99A]
Length = 259
Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats.
Identities = 68/222 (30%), Positives = 113/222 (50%), Gaps = 4/222 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
I+ L ++ + VK I+ LL I S +SW +I +K+ F R+ EFE FWSG L
Sbjct: 37 INYVDLILRASIPVKIIVLLLLIGSFISWVIIFRKARAFKQANREADEFENRFWSGADLA 96
Query: 71 TVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ S + + GL ++F E+ + D+ + R M A RE++++
Sbjct: 97 KLYASATDRNRTVGGLESMFEGGFREFSRLRDRRRLDARVQLEGAQRAMRTAFTREVDQL 156
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGL 186
L L ++ S VG++G V G+M + +G + PGI E+L + +GL
Sbjct: 157 ERNLELLANIGSTAPYVGLVGTVFGIMVTMHDMVSSGEQAGIAAVAPGISEALFATAIGL 216
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
V+IP+ AYN+F ++ +++ E FA+EFS+IL RQ +
Sbjct: 217 FVAIPAVWAYNRFTTRVERLSVRYETFADEFSSILQRQVGAD 258
>gi|58581288|ref|YP_200304.1| hypothetical protein XOO1665 [Xanthomonas oryzae pv. oryzae
KACC10331]
gi|84623206|ref|YP_450578.1| TolQ protein [Xanthomonas oryzae pv. oryzae MAFF 311018]
gi|58425882|gb|AAW74919.1| TolQ protein [Xanthomonas oryzae pv. oryzae KACC10331]
gi|84367146|dbj|BAE68304.1| TolQ protein [Xanthomonas oryzae pv. oryzae MAFF 311018]
Length = 259
Score = 212 bits (541), Expect = 3e-53, Method: Composition-based stats.
Identities = 68/222 (30%), Positives = 113/222 (50%), Gaps = 4/222 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
I+ L ++ + VK I+ LL I S +SW +I +K+ F R+ EFE FWSG L
Sbjct: 37 INYVDLILRASIPVKIIVLLLLIGSFISWVIIFRKARAFKQANREADEFENRFWSGADLA 96
Query: 71 TVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ S + + GL ++F E+ + D+ + R M A RE++++
Sbjct: 97 KLYASATDRNRSVGGLESMFEGGFREFSRLRDRRRLDARVQLEGAQRAMRTAFTREVDQL 156
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGL 186
L L ++ S VG++G V G+M + +G + PGI E+L + +GL
Sbjct: 157 ERNLELLANIGSTAPYVGLVGTVFGIMVTMHDMVSSGEQAGIAAVAPGISEALFATAIGL 216
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
V+IP+ AYN+F ++ +++ E FA+EFS+IL RQ +
Sbjct: 217 FVAIPAVWAYNRFTTRVERLSVRYETFADEFSSILQRQVGAD 258
>gi|239995976|ref|ZP_04716500.1| tolQ protein [Alteromonas macleodii ATCC 27126]
Length = 229
Score = 212 bits (541), Expect = 3e-53, Method: Composition-based stats.
Identities = 73/216 (33%), Positives = 112/216 (51%), Gaps = 3/216 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D++ LF+Q V+ ++ LL SI SW+ I Q+S R + R+FE FWSG L
Sbjct: 4 DLTFIGLFLQASFIVQLVMLLLLSVSIASWTFIFQRSKALSAARNEMRQFEDKFWSGADL 63
Query: 70 ETVCKSLKNHHN-IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ + L N G+ +IF S E+ + + GI D R M V+++R++EE+
Sbjct: 64 NRLYQELSARTNLTGMGSIFCSGFKEFVRLRKSNTATN-GIVDGTYRAMRVSMSRQVEEL 122
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLC 187
+L FL + S +G+ G V G+M F ++ + + PGI E+LI+ +GL
Sbjct: 123 ESRLPFLATAGSISPYIGLFGTVWGIMNAFIALGEVQQATLAMVAPGIAEALIATAIGLF 182
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
+IP+ IAYN+F +K F EFSAIL R
Sbjct: 183 AAIPAVIAYNRFSHQVEKLENSYGNFMEEFSAILHR 218
>gi|153214280|ref|ZP_01949297.1| tolQ protein [Vibrio cholerae 1587]
gi|229520299|ref|ZP_04409725.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae TM
11079-80]
gi|229523857|ref|ZP_04413262.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae bv.
albensis VL426]
gi|229529138|ref|ZP_04418528.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae
12129(1)]
gi|124115428|gb|EAY34248.1| tolQ protein [Vibrio cholerae 1587]
gi|229332912|gb|EEN98398.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae
12129(1)]
gi|229337438|gb|EEO02455.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae bv.
albensis VL426]
gi|229342665|gb|EEO07657.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae TM
11079-80]
Length = 208
Score = 212 bits (541), Expect = 3e-53, Method: Composition-based stats.
Identities = 59/202 (29%), Positives = 99/202 (49%), Gaps = 3/202 (1%)
Query: 27 IITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNI--GL 84
++ L S+ SW+ II++S R+ FE FWSG L + + +K + G+
Sbjct: 2 VMLTLLGMSVASWAAIIKRSKVISAAEREADTFEDRFWSGMDLGALYQDVKKRKDDIYGI 61
Query: 85 AAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLL 144
IF + +E+ + +P + + R M VA+ARE++ + L FL ++ S
Sbjct: 62 EEIFYAGFTEFARLRKTNPGAPDFVMEGTGRAMRVAVAREVDSLETSLPFLATVGSISPY 121
Query: 145 VGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCVSIPSSIAYNKFIEDS 203
+G+ G V G+M F ++ + + PGI E+LI+ +GL +IP+ +AYN+
Sbjct: 122 IGLFGTVWGIMHAFIALGEVKQATLAMVAPGIAEALIATAIGLFAAIPAVMAYNRLSNKV 181
Query: 204 KKFAMQMEGFANEFSAILSRQT 225
K F+ EF IL RQ
Sbjct: 182 SKLEHTYATFSEEFHTILHRQA 203
>gi|13235473|emb|CAC33632.1| TolQ protein [Rickettsia montanensis]
Length = 241
Score = 212 bits (541), Expect = 3e-53, Method: Composition-based stats.
Identities = 73/205 (35%), Positives = 117/205 (57%), Gaps = 3/205 (1%)
Query: 25 KCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGL 84
K ++ +L I SI SW++I+ K + +++ R FE +FWSG LE + +S+K N L
Sbjct: 33 KSVMLMLLIASIWSWAIILDKIFKLVQVQKSMRAFENVFWSGGVLERLYESIKRSVNNPL 92
Query: 85 AAIFMSAMSEWKKSCDKGARSPI--GIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAG 142
A IF+ AM E K KG + ++RI M +A RE+ ++ + LSFL ++ S+
Sbjct: 93 ALIFVLAMDECKSLSTKGLSEGLKNNHKERITGAMYLAQNREVAKLEKNLSFLATVGSSA 152
Query: 143 LLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIE 201
VG+ G V G+M FQSIA + ++ V PGI E+L++ +GL +IP+ I YN I
Sbjct: 153 PFVGLFGTVWGIMHSFQSIATSKNTSLAVVAPGIAEALLATAIGLFAAIPAVIFYNYLIS 212
Query: 202 DSKKFAMQMEGFANEFSAILSRQTE 226
++E F +E ++ILS+ +
Sbjct: 213 RITLINNKIEDFISELNSILSKAID 237
>gi|166712986|ref|ZP_02244193.1| TolQ [Xanthomonas oryzae pv. oryzicola BLS256]
Length = 259
Score = 212 bits (540), Expect = 3e-53, Method: Composition-based stats.
Identities = 68/222 (30%), Positives = 113/222 (50%), Gaps = 4/222 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
I+ L ++ + VK I+ LL I S +SW +I +K+ F R+ EFE FWSG L
Sbjct: 37 INYVDLILRASIPVKIIVLLLLIGSFISWVIIFRKARAFKQANREADEFENRFWSGADLA 96
Query: 71 TVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ S + + GL ++F E+ + D+ + R M A RE++++
Sbjct: 97 KLYASATDRNRTVGGLESMFEGGFREFSRLRDRRRLDARVQLEGAQRAMRTAFTREVDQL 156
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGL 186
L L ++ S VG++G V G+M + +G + PGI E+L + +GL
Sbjct: 157 ERNLELLANIGSTAPYVGLVGTVFGIMVTMHDMVSSGEQAGIAAVAPGISEALFATAIGL 216
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
V+IP+ AYN+F ++ +++ E FA+EFS+IL RQ +
Sbjct: 217 FVAIPAVWAYNRFTTRVERLSVRYETFADEFSSILQRQAGAD 258
>gi|237729936|ref|ZP_04560417.1| biopolymer transporter ExbB [Citrobacter sp. 30_2]
gi|226908542|gb|EEH94460.1| biopolymer transporter ExbB [Citrobacter sp. 30_2]
Length = 244
Score = 212 bits (540), Expect = 3e-53, Method: Composition-based stats.
Identities = 57/227 (25%), Positives = 110/227 (48%), Gaps = 4/227 (1%)
Query: 6 LAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS 65
L D+S++ ++ + VKC++ L + S+++W++ KS+ F T +R+ + +QL
Sbjct: 5 LMQTDLSVWGMYQHADIVVKCVMIGLILASVVTWAIFFSKSLEFFTQKRRLKREQQLLAE 64
Query: 66 GQSLETVCKSLKNHHNIGL-AAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARE 124
+SL+ + L A + A +E + S +G+ GI++R ++ +A
Sbjct: 65 ARSLDQASEIAAGFDGKSLGAQLINEAQNELELS--EGSDDNEGIKERTGFRLERRVAAV 122
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISIL 183
+ +L ++ + VG+ G V G+M F IA + N+ V PGI E+L++
Sbjct: 123 GRHMGRGNGYLATIGAISPFVGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGIAEALLATA 182
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
+GL +IP+ + YN F + + A + + SR + N S
Sbjct: 183 IGLVAAIPAVVIYNIFARQIGSYKAMLGDVAAQVLLLQSRDLDLNAS 229
>gi|85710727|ref|ZP_01041791.1| MotA/TolQ/ExbB proton channel family protein [Erythrobacter sp.
NAP1]
gi|85687905|gb|EAQ27910.1| MotA/TolQ/ExbB proton channel family protein [Erythrobacter sp.
NAP1]
Length = 240
Score = 212 bits (540), Expect = 3e-53, Method: Composition-based stats.
Identities = 63/222 (28%), Positives = 112/222 (50%), Gaps = 2/222 (0%)
Query: 6 LAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS 65
L + LF++ + V+ ++ L + SI +W++I+ + L RE+E FW
Sbjct: 18 LGPTRLDPIELFLEADIVVQAVMIGLILASIWTWAIIVSFLLRIGKLNSASREYEAEFWD 77
Query: 66 GQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
+ E V + + A + + + EW++S GA + RI M+ +A E
Sbjct: 78 TRDREAVLTK-QRRAKVPSARVAGAGLDEWRRSTKGGAPDRPAARQRIGAAMESQVAEEA 136
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILL 184
+++ KL+FL + S VG+ G V G+M F I S ++ V PGI E+L + +
Sbjct: 137 DDLAGKLNFLATTGSVAPFVGLFGTVWGIMNSFFQIGAQQSASLAVVAPGIAEALFATAI 196
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
GL +IP+ IAYN+F ++ +++ FA++ A LSR+ +
Sbjct: 197 GLFAAIPAVIAYNRFSNSVNQYEAKLQRFADKVHAGLSRELD 238
>gi|78048831|ref|YP_365006.1| biopolymer transport TolQ protein [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|325929360|ref|ZP_08190490.1| Cell division and transport-associated protein TolQ (TC 2.C.1.2.1)
[Xanthomonas perforans 91-118]
gi|78037261|emb|CAJ25006.1| biopolymer transport TolQ protein [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|325540272|gb|EGD11884.1| Cell division and transport-associated protein TolQ (TC 2.C.1.2.1)
[Xanthomonas perforans 91-118]
Length = 259
Score = 212 bits (540), Expect = 4e-53, Method: Composition-based stats.
Identities = 69/222 (31%), Positives = 114/222 (51%), Gaps = 4/222 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
I+ L ++ + VK I+ LL I S +SW +I +K+ F R+ EFE FWSG L
Sbjct: 37 INYVDLILRASIPVKIIVLLLLIGSFISWVIIFRKARAFKLANREADEFENRFWSGADLA 96
Query: 71 TVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ S + + GL ++F S E+ + D+ + R M A RE++++
Sbjct: 97 KLYASATDRNRTVGGLESMFESGFREFSRLRDRRRLDARVQLEGAQRAMRTAFTREVDQL 156
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGL 186
L L ++ S VG++G V G+M + +G + PGI E+L + +GL
Sbjct: 157 ERNLELLANIGSTAPYVGLVGTVFGIMVTMHDMVSSGEQAGIAAVAPGISEALFATAIGL 216
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
V+IP+ AYN+F ++ +++ E FA+EFS+IL RQ +
Sbjct: 217 FVAIPAVWAYNRFTTRVERLSVRYETFADEFSSILQRQAGAD 258
>gi|153824285|ref|ZP_01976952.1| protein TolQ [Vibrio cholerae B33]
gi|126518191|gb|EAZ75416.1| protein TolQ [Vibrio cholerae B33]
Length = 200
Score = 211 bits (539), Expect = 4e-53, Method: Composition-based stats.
Identities = 59/200 (29%), Positives = 98/200 (49%), Gaps = 3/200 (1%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNI--GLA 85
+ L S+ SW+ II++S R+ FE FWSG L + + +K + G+
Sbjct: 1 MLTLLGMSVASWAAIIKRSKVISAAEREADTFEDRFWSGMDLGALYQDVKKRKDDIYGIE 60
Query: 86 AIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLV 145
IF + +E+ + +P + + R M VA+ARE++ + L FL ++ S +
Sbjct: 61 EIFYAGFTEFARLRKTNPGAPDFVMEGTGRAMRVAVAREVDSLETSLPFLATVGSISPYI 120
Query: 146 GILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCVSIPSSIAYNKFIEDSK 204
G+ G V G+M F ++ + + PGI E+LI+ +GL +IP+ +AYN+
Sbjct: 121 GLFGTVWGIMHAFIALGEVKQATLAMVAPGIAEALIATAIGLFAAIPAVMAYNRLSNKVS 180
Query: 205 KFAMQMEGFANEFSAILSRQ 224
K F+ EF IL RQ
Sbjct: 181 KLEHTYATFSEEFHTILHRQ 200
>gi|218550255|ref|YP_002384046.1| biopolymer transport protein ExbB [Escherichia fergusonii ATCC
35469]
gi|218357796|emb|CAQ90440.1| membrane spanning protein in TonB-ExbB-ExbD complex [Escherichia
fergusonii ATCC 35469]
Length = 244
Score = 211 bits (539), Expect = 4e-53, Method: Composition-based stats.
Identities = 57/227 (25%), Positives = 109/227 (48%), Gaps = 4/227 (1%)
Query: 6 LAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS 65
L D+S++ ++ + VKC++ L + S+++W++ KSV F +R+ + +QL
Sbjct: 5 LMQTDLSVWGMYQHADIVVKCVMIGLILASVVTWAIFFTKSVEFFKQKRRLKREQQLLAD 64
Query: 66 GQSLETVCKSLKNHHNIGLA-AIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARE 124
+SL+ + + L+ + A +E + S G+ GI++R ++ ++A
Sbjct: 65 ARSLDQASEIAGDFGKYSLSLQLLNEAQNELELSA--GSDDNDGIKERTSFRLERSVAAV 122
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISIL 183
+ FL ++ + VG+ G V G+M F IA + N+ V PGI E+L++
Sbjct: 123 GRYMGRGNGFLATIGAISPFVGLFGTVWGIMNSFIGIAQSQTTNLAVVAPGIAEALLATA 182
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
+GL +IP+ + YN F F + A + + SR + S
Sbjct: 183 IGLVAAIPAVVIYNIFARQIAGFKAMLGDVAAQVLLLQSRDLDLEAS 229
>gi|229591135|ref|YP_002873254.1| putative TolQ transport transmembrane protein [Pseudomonas
fluorescens SBW25]
gi|229363001|emb|CAY49951.1| putative TolQ transport transmembrane protein [Pseudomonas
fluorescens SBW25]
Length = 230
Score = 211 bits (539), Expect = 5e-53, Method: Composition-based stats.
Identities = 60/222 (27%), Positives = 105/222 (47%), Gaps = 5/222 (2%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
+ ++I+ L L VK ++ L + S+LSW +IIQ+ L RQ F + F +
Sbjct: 5 MEHMTIWGLISDASLLVKAVMVTLLLASLLSWYLIIQRGSVLRRLERQLNGFVRRFRAAS 64
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
L+ + + G+A IF++ + E++ + + ++R + VAI + E
Sbjct: 65 DLQPLYRETVQAGEGGIAPIFIAGVQEYQHLHSH----DPAVLEGVERALQVAITEQEIE 120
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
+ + L FL ++ S +G+ G V G+M F ++ + PGI E+LI+ +GL
Sbjct: 121 LEKGLQFLATVGSVSPYIGLFGTVWGIMNSFIGLSQVQQATLSTVAPGIAEALIATAIGL 180
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
+IP+ IAYN+F + + F NE L R G
Sbjct: 181 FAAIPAVIAYNRFAARGQTLLTRYYAFGNELQVRLHRTLRGT 222
>gi|34496006|ref|NP_900221.1| tolQ-related transport transmembrane protein [Chromobacterium
violaceum ATCC 12472]
gi|34101859|gb|AAQ58227.1| tolQ-related transport transmembrane protein [Chromobacterium
violaceum ATCC 12472]
Length = 222
Score = 211 bits (539), Expect = 5e-53, Method: Composition-based stats.
Identities = 66/218 (30%), Positives = 108/218 (49%), Gaps = 2/218 (0%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
+ IS +L + L V+ ++ L + S+LSW++I K + +R EFE+ FWSG
Sbjct: 1 MQQISFISLILNASLLVQLVMAGLALTSLLSWALIFNKISVLRSAKRHSEEFERNFWSGA 60
Query: 68 SLETVCKSLKNHHNI-GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
L + + + + G+ IF S +E+ K + I D R M A REL+
Sbjct: 61 DLNRLYEDVCRRSDTVGMERIFQSGFAEFLKLRGRSGAELSDIMDGSRRAMRAAAQRELD 120
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLG 185
+ SFL ++ S +G+ G V G+M F + + PGI E+L++ +G
Sbjct: 121 ALDSHTSFLATVGSVSPYIGLFGTVWGIMHAFIGLGNAGQATLSTVAPGIAEALVATAIG 180
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
L +IP+ +AYN+F D + A + + + EFS IL R
Sbjct: 181 LFAAIPAVVAYNRFATDVDRLATRFDTYMEEFSNILQR 218
>gi|77461776|ref|YP_351283.1| MotA/TolQ/ExbB proton channel [Pseudomonas fluorescens Pf0-1]
gi|77385779|gb|ABA77292.1| outer membrane transport energization protein ExbB [Pseudomonas
fluorescens Pf0-1]
Length = 317
Score = 211 bits (538), Expect = 5e-53, Method: Composition-based stats.
Identities = 55/226 (24%), Positives = 104/226 (46%), Gaps = 5/226 (2%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N G+A D+S + ++ + VK ++ L I SI++W++ I K + +R+ R
Sbjct: 80 NTLGMA-HDLSPWGMYQNADVIVKAVMIGLAIASIITWTIWIAKGFELMGAKRRLRGEIA 138
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
+L+ + + + A+ E + S AR GI++R+ ++ +
Sbjct: 139 ALKKAATLKEASATAAKEGTLA-NLLVHDALEEMRLST--NAREKEGIKERVSFRLERLV 195
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLI 180
A ++ L ++ S VG+ G V G+M F IA + N+ V PGI E+L+
Sbjct: 196 AACGRNMSSGTGVLATIGSTAPFVGLFGTVWGIMNSFIGIAKTQTTNLAVVAPGIAEALL 255
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+ LGL +IP+ + YN F + Q+ + + ++SR +
Sbjct: 256 ATALGLVAAIPAVVIYNVFARSIAGYKAQVSDASAQVLLLVSRDLD 301
>gi|21232451|ref|NP_638368.1| TolQ protein [Xanthomonas campestris pv. campestris str. ATCC
33913]
gi|66767466|ref|YP_242228.1| TolQ protein [Xanthomonas campestris pv. campestris str. 8004]
gi|188990572|ref|YP_001902582.1| Biopolymer transport TolQ protein [Xanthomonas campestris pv.
campestris str. B100]
gi|21114233|gb|AAM42292.1| TolQ protein [Xanthomonas campestris pv. campestris str. ATCC
33913]
gi|66572798|gb|AAY48208.1| TolQ protein [Xanthomonas campestris pv. campestris str. 8004]
gi|167732332|emb|CAP50524.1| Biopolymer transport TolQ protein [Xanthomonas campestris pv.
campestris]
Length = 259
Score = 211 bits (538), Expect = 6e-53, Method: Composition-based stats.
Identities = 69/222 (31%), Positives = 114/222 (51%), Gaps = 4/222 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
I+ L ++ + VK I+ LL I S +SW +I +K+ F R+ EFE FWSG L
Sbjct: 37 INYAELILRASIPVKIIVLLLLIGSFISWVIIFRKARAFKQANREADEFENRFWSGADLA 96
Query: 71 TVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ S + + GL ++F S E+ + D+ + R M A RE++++
Sbjct: 97 KLYASATDRNRTVGGLESMFESGFREFSRLRDRRRLDARVQLEGAQRAMRTAFTREVDQL 156
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGL 186
L L ++ S VG++G V G+M + +G + PGI E+L + +GL
Sbjct: 157 ERNLELLANIGSTAPYVGLVGTVFGIMVTMHDMVSSGEQAGIAAVAPGISEALFATAIGL 216
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
V+IP+ AYN+F ++ +++ E FA+EFS+IL RQ +
Sbjct: 217 FVAIPAVWAYNRFTTRVERLSVRYETFADEFSSILQRQAGAD 258
>gi|330954684|gb|EGH54944.1| tolQ protein [Pseudomonas syringae Cit 7]
Length = 236
Score = 211 bits (538), Expect = 6e-53, Method: Composition-based stats.
Identities = 58/220 (26%), Positives = 106/220 (48%), Gaps = 3/220 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
++I+ L L VK ++ +L + S++SW +IIQ+S+ R F+Q F S L
Sbjct: 8 MTIWGLISDASLLVKAVMLILLLASLVSWYLIIQRSLVLRHYERSLDAFQQRFRSAADLA 67
Query: 71 --TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
S G+ +F + +E+ + + P + ++R + VAI+ + ++
Sbjct: 68 PLQAQASSAQRDATGIEDVFQAGYAEYMQLKQRPGIEPDVVLSGVERSLQVAISEQELQL 127
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
+ L FL ++ S +G+ G V G+M F ++ + PGI E+LI+ +GL
Sbjct: 128 EKGLQFLATVGSVSPYIGLFGTVWGIMNSFIGLSQVQQATLSTVAPGIAEALIATAIGLF 187
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEG 227
+IP+ +AYN+F + + F NE L+R +G
Sbjct: 188 AAIPAVVAYNRFAARGQTLTARYYSFGNELQVRLNRTLQG 227
>gi|159043657|ref|YP_001532451.1| Tol-Pal system TolQ [Dinoroseobacter shibae DFL 12]
gi|157911417|gb|ABV92850.1| Tol-Pal system TolQ [Dinoroseobacter shibae DFL 12]
Length = 224
Score = 211 bits (537), Expect = 7e-53, Method: Composition-based stats.
Identities = 80/220 (36%), Positives = 121/220 (55%), Gaps = 1/220 (0%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
+D S ALF + L V+ ++ LL S SWS+IIQK + F R + F+ FWSG
Sbjct: 5 IDFSFLALFARATLTVQLVMILLIGMSFWSWSIIIQKWITFRKARAEAEAFDAAFWSGDP 64
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
L+ + + + +F S M+EW++S G Q RIDR MDVAIA++ E +
Sbjct: 65 LDDLFDEIGPTPDGAAQRVFASGMTEWRRSHRDTGDLIPGAQQRIDRSMDVAIAKQSERL 124
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
L+FL + + +G+ G V G+ F+ IA + N+ V PGI E+L++ LGL
Sbjct: 125 QNGLNFLATTGATAPFIGLFGTVWGIKHSFEQIAIQQNTNLAVVAPGIAEALLATGLGLL 184
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEG 227
+IP+ +AYNK D+ + E FA+EF+ +LSRQ +
Sbjct: 185 AAIPAVVAYNKLSADADRIVGGYEAFADEFATLLSRQLDA 224
>gi|82545391|ref|YP_409338.1| biopolymer transport protein ExbB [Shigella boydii Sb227]
gi|187730205|ref|YP_001881769.1| biopolymer transport protein ExbB [Shigella boydii CDC 3083-94]
gi|81246802|gb|ABB67510.1| ExbB [Shigella boydii Sb227]
gi|187427197|gb|ACD06471.1| tonB-system energizer ExbB [Shigella boydii CDC 3083-94]
gi|320175247|gb|EFW50355.1| MotA/TolQ/ExbB proton channel family protein [Shigella dysenteriae
CDC 74-1112]
gi|320187488|gb|EFW62175.1| MotA/TolQ/ExbB proton channel family protein [Shigella flexneri CDC
796-83]
Length = 244
Score = 211 bits (537), Expect = 7e-53, Method: Composition-based stats.
Identities = 57/227 (25%), Positives = 110/227 (48%), Gaps = 4/227 (1%)
Query: 6 LAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS 65
L D+S++ ++ + VKC++ L + S+++W++ KSV F +R+ + +QL
Sbjct: 5 LMQTDLSVWGMYQHADIVVKCVMIGLILASVVTWAIFFSKSVEFFNQKRRLKREQQLLAE 64
Query: 66 GQSLETVCKSLKNHHNIGLA-AIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARE 124
+SL + + L+ +F A +E + S +G+ GI++R ++ +A
Sbjct: 65 ARSLNQANDIAADFGSKSLSLHLFNEAQNELELS--EGSDDNEGIKERTSFRLERRVAAV 122
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISIL 183
++ +L ++ + VG+ G V G+M F IA + N+ V PGI E+L++
Sbjct: 123 GRQMGRGNGYLATIGAISPFVGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGIAEALLATA 182
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
+GL +IP+ + YN F F + A + + SR + S
Sbjct: 183 IGLVAAIPAVVIYNVFARQIGGFKAMLGDVAAQVLLLQSRDLDLEAS 229
>gi|261855151|ref|YP_003262434.1| protein TolQ [Halothiobacillus neapolitanus c2]
gi|261835620|gb|ACX95387.1| protein TolQ [Halothiobacillus neapolitanus c2]
Length = 225
Score = 211 bits (537), Expect = 8e-53, Method: Composition-based stats.
Identities = 64/220 (29%), Positives = 112/220 (50%), Gaps = 3/220 (1%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLET 71
S+ L + L V+ ++ +L + S+ SW++I KS R Q + FE+ FWSG SL
Sbjct: 6 SVMHLVLGASLPVQLVLLILLLASVASWALIFHKSSLLRRARAQAKRFEESFWSGGSLND 65
Query: 72 VCKSLKN--HHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+ G AIF + E+K+ RS + + ++R M V + R++++
Sbjct: 66 FYDRISRDPRPREGQEAIFEAGFREFKRLRQIEGRSSSELLEGVERAMRVTLHRQIDKFE 125
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCV 188
E LS L ++ S VG+ G V G+M F ++ + + ++ P I E+LI+ +GL
Sbjct: 126 EGLSVLATIGSVSPYVGLFGTVWGIMSAFMNLGNAQNATLATVAPPIAEALIATAMGLFA 185
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
+IP+ +AYN++ + + + F +EF +L RQ G
Sbjct: 186 AIPAVVAYNRYSTQIDELFGRYDRFTDEFLGLLQRQIGGQ 225
>gi|258545750|ref|ZP_05705984.1| TolQ protein [Cardiobacterium hominis ATCC 15826]
gi|258518995|gb|EEV87854.1| TolQ protein [Cardiobacterium hominis ATCC 15826]
Length = 243
Score = 211 bits (537), Expect = 8e-53, Method: Composition-based stats.
Identities = 66/226 (29%), Positives = 112/226 (49%), Gaps = 3/226 (1%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
M A +S+ L + VK I+ +LF+ + + + +K V F+ LR + ++F+
Sbjct: 1 MQPT--AETGLSVSRLIGDASIPVKVIMLILFMMFLTTLFITGKKYVQFLRLRHKIKQFD 58
Query: 61 QLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVA 120
+ FWSG LE + + H + +F E+ + +P I R M A
Sbjct: 59 RTFWSGNDLEVLYAGYEKRHPESIERVFTDGFREFMQFQGNSLDNPDVIVHNCRRAMTAA 118
Query: 121 IARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESL 179
+ RE L+ L ++ S+ +G+LG V G+M F +I G S ++ PGI E+L
Sbjct: 119 LNRESSRQERGLNLLATIGSSAPYIGLLGTVYGIMNSFIAIGGAQSASISSVAPGIAEAL 178
Query: 180 ISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
I+ +GL +IPS ++YN F+ S+ ++ + F EFS +L RQ
Sbjct: 179 IATAIGLLAAIPSVLSYNYFVAHSESLTVEYDAFIEEFSNLLQRQI 224
>gi|324114962|gb|EGC08927.1| tonB-system energizer ExbB [Escherichia fergusonii B253]
Length = 239
Score = 211 bits (537), Expect = 8e-53, Method: Composition-based stats.
Identities = 56/224 (25%), Positives = 108/224 (48%), Gaps = 4/224 (1%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
D+S++ ++ + VKC++ L + S+++W++ KSV F +R+ + +QL +S
Sbjct: 3 TDLSVWGMYQHADIVVKCVMIGLILASVVTWAIFFTKSVEFFKQKRRLKREQQLLADARS 62
Query: 69 LETVCKSLKNHHNIGLA-AIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
L+ + + L+ + A +E + S G+ GI++R ++ ++A
Sbjct: 63 LDQASEIAGDFGKYSLSLQLLNEAQNELELSA--GSDDNDGIKERTSFRLERSVAAVGRY 120
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
+ FL ++ + VG+ G V G+M F IA + N+ V PGI E+L++ +GL
Sbjct: 121 MGRGNGFLATIGAISPFVGLFGTVWGIMNSFIGIAQSQTTNLAVVAPGIAEALLATAIGL 180
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
+IP+ + YN F F + A + + SR + S
Sbjct: 181 VAAIPAVVIYNIFARQIAGFKAMLGDVAAQVLLLQSRDLDLEAS 224
>gi|15838498|ref|NP_299186.1| TolQ protein [Xylella fastidiosa 9a5c]
gi|9106995|gb|AAF84706.1|AE004010_3 TolQ protein [Xylella fastidiosa 9a5c]
Length = 257
Score = 211 bits (537), Expect = 8e-53, Method: Composition-based stats.
Identities = 70/225 (31%), Positives = 113/225 (50%), Gaps = 4/225 (1%)
Query: 5 GLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFW 64
G A I+ L ++ + VK I+ LL + S SW +I +K+ F R+ +FE FW
Sbjct: 29 GTAHGGINYIDLMLKASIPVKIIVLLLLLGSFTSWVIIFRKARVFKQANREADQFENRFW 88
Query: 65 SGQSLETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIA 122
SG L + S + + GL AIF E+ + ++ P + R+M
Sbjct: 89 SGTDLSKLYASTNSRKHMVSGLEAIFEGGFREFTRLRERRRLDPRIQIEGAQRVMRTNFM 148
Query: 123 RELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLI 180
RE++++ L L ++ S VG++G V G+M + +G + PGI E+L
Sbjct: 149 REMDQLERNLELLANIGSTAPYVGLVGTVFGIMVTMHDMISSGDQAGIAAVAPGISEALF 208
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+ +GL V+IP+ AYN+F ++ +++ E FA EFSAIL RQ
Sbjct: 209 ATAVGLFVAIPAVWAYNRFTTRVERLSVRYETFAEEFSAILQRQV 253
>gi|157148574|ref|YP_001455893.1| biopolymer transport protein ExbB [Citrobacter koseri ATCC BAA-895]
gi|157085779|gb|ABV15457.1| hypothetical protein CKO_04401 [Citrobacter koseri ATCC BAA-895]
Length = 239
Score = 210 bits (536), Expect = 1e-52, Method: Composition-based stats.
Identities = 54/224 (24%), Positives = 107/224 (47%), Gaps = 4/224 (1%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
D+S++ ++ + VKC++ L + S+++W++ KS+ F T +R+ + +Q +S
Sbjct: 3 TDLSVWGMYQHADIVVKCVMIGLILASVVTWAIFFSKSLEFFTQKRRLKREQQQLAEARS 62
Query: 69 LETVCKSLKNHHNIGL-AAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
L+ L + + A +E + S +G+ GI++R ++ +A
Sbjct: 63 LDQASNIASAFAAKSLSSQLLYEAQNELELS--EGSEDNEGIKERTGFRLERRVAAVGRH 120
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
+ +L ++ + VG+ G V G+M F IA + N+ V PGI E+L++ +GL
Sbjct: 121 MGRGNGYLATIGAISPFVGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGIAEALLATAIGL 180
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
+IP+ + YN F + + A + + SR + N S
Sbjct: 181 VAAIPAVVIYNIFARQIGSYKATLGDVAAQILLLQSRDLDLNAS 224
>gi|255020127|ref|ZP_05292197.1| MotA/TolQ/ExbB proton channel family protein [Acidithiobacillus
caldus ATCC 51756]
gi|254970420|gb|EET27912.1| MotA/TolQ/ExbB proton channel family protein [Acidithiobacillus
caldus ATCC 51756]
Length = 233
Score = 210 bits (536), Expect = 1e-52, Method: Composition-based stats.
Identities = 68/222 (30%), Positives = 111/222 (50%), Gaps = 5/222 (2%)
Query: 7 AIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG 66
A +S+ L + V+ I+ LL I S+ SW VI QK++ F +R + FE+ FWSG
Sbjct: 9 AAESLSLTHLVLHASWVVQAILVLLLIASVASWYVIFQKALVFAHAQRALKRFEKRFWSG 68
Query: 67 QSLETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARE 124
+ + + + + G AIF + E+++ + + R M A RE
Sbjct: 69 GEMAQIYQQVTGNAQLETGAGAIFCAGYEEFQRQRKQARGADALDA--ARRAMRGAQIRE 126
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISIL 183
+ ++ L L S+SS VG+LG V G+M F +I + ++ P + E+LI+ L
Sbjct: 127 VGQLEGNLPLLASISSVAPFVGLLGTVWGIMTTFMNIGAAQQATLATVAPPVAEALIATL 186
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
GL +IP++ YN+F+ + E F +EF+ IL RQT
Sbjct: 187 AGLFAAIPATFFYNRFVHRLDELDSHYEVFMDEFTNILHRQT 228
>gi|330812607|ref|YP_004357069.1| transporter [Pseudomonas brassicacearum subsp. brassicacearum
NFM421]
gi|327380715|gb|AEA72065.1| putative transporter [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
Length = 323
Score = 210 bits (536), Expect = 1e-52, Method: Composition-based stats.
Identities = 55/226 (24%), Positives = 105/226 (46%), Gaps = 5/226 (2%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N+ G+A D+S + ++ + VK ++ L I SI++W++ I K + +R+ R
Sbjct: 86 NSLGMA-HDLSPWGMYKNADIIVKIVMIGLAIASIITWTIWIAKGFELLGAKRRLRGEIA 144
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
+L+ + + + A+ E + S +R GI++R+ ++ +
Sbjct: 145 ALKKATTLKEASATAAKAGTLA-NLLVHDALEEMRLSA--NSREKEGIKERVSFRLERLV 201
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLI 180
A ++ L ++ S VG+ G V G+M F IA + N+ V PGI E+L+
Sbjct: 202 AACGRNMSSGTGVLATIGSTAPFVGLFGTVWGIMNSFIGIAKTQTTNLAVVAPGIAEALL 261
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+ LGL +IP+ + YN F + Q+ + E ++SR +
Sbjct: 262 ATALGLVAAIPAVVIYNVFARSIAGYKAQVSDASAEVLLLVSRDLD 307
>gi|325981321|ref|YP_004293723.1| protein TolQ [Nitrosomonas sp. AL212]
gi|325530840|gb|ADZ25561.1| protein TolQ [Nitrosomonas sp. AL212]
Length = 226
Score = 210 bits (536), Expect = 1e-52, Method: Composition-based stats.
Identities = 61/223 (27%), Positives = 106/223 (47%), Gaps = 5/223 (2%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
D+S L L V+ ++ +L + S SW I +K +R+ +FE +FW G
Sbjct: 6 TQDMSFLYLISSASLLVQLVMLILVLISFFSWWFIFRKLFVIRNEKRKTDDFEDIFWRGV 65
Query: 68 SLETVCKSL--KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
L + + + + + L IF + E+ K + + R M RE+
Sbjct: 66 DLNALHQRITSARYDSGSLERIFAAGFGEFNK--HPAGSDLDAVMESTRRAMRATYQREM 123
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV-SIPGIIESLISILL 184
+ + LSFL ++ S +G+LG V G+M F+S++ + PGI E+LI+ +
Sbjct: 124 DYLESHLSFLATVGSVSPYIGLLGTVWGIMNSFRSLSSVTQATIAHVAPGIAEALIATAM 183
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEG 227
GL +IP+ +AYN++ + + A + E F E S +L R+ G
Sbjct: 184 GLFAAIPAVVAYNRYASSTDQLATRFESFMEELSNVLQRRAAG 226
>gi|161506270|ref|YP_001573382.1| biopolymer transport protein ExbB [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-- str. RSK2980]
gi|160867617|gb|ABX24240.1| hypothetical protein SARI_04465 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 239
Score = 210 bits (535), Expect = 1e-52, Method: Composition-based stats.
Identities = 55/224 (24%), Positives = 107/224 (47%), Gaps = 4/224 (1%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
D+S++ ++ + VKC++ L + S+++W++ KSV F + +R+ + +Q +S
Sbjct: 3 TDLSVWGMYQHADIVVKCVMIGLILASVVTWAIFFSKSVEFFSQKRRLKHEQQQLVDARS 62
Query: 69 LETVCKSLKNHHNIGL-AAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
L+ L A + A +E + S +G+ GI++R ++ +A
Sbjct: 63 LDQAADIAAGFSAKSLSAQLINEAQNELELS--QGSEDNEGIKERTGFRLERRVAAVGRY 120
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
+ +L ++ + VG+ G V G+M F IA + N+ V PGI E+L++ +GL
Sbjct: 121 MGRGNGYLATIGAISPFVGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGIAEALLATAIGL 180
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
+IP+ + YN F + + A + + SR + N S
Sbjct: 181 VAAIPAVVIYNIFARQIGSYKATLGDVAAQVLLLQSRDLDLNAS 224
>gi|194444554|ref|YP_002042424.1| biopolymer transport protein ExbB [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
gi|194403217|gb|ACF63439.1| tonB-system energizer ExbB [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
Length = 244
Score = 210 bits (535), Expect = 1e-52, Method: Composition-based stats.
Identities = 56/227 (24%), Positives = 107/227 (47%), Gaps = 4/227 (1%)
Query: 6 LAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS 65
L D+S++ ++ + VKC++ L + S+++W++ KSV F T +R+ + +
Sbjct: 5 LMQTDLSVWGMYQHADIVVKCVMIGLILASVVTWAIFFSKSVEFFTQKRRLKREQLQLAD 64
Query: 66 GQSLETVCKSLKNHHNIGL-AAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARE 124
+SL+ L A + A +E + S +G+ GI++R ++ +A
Sbjct: 65 ARSLDQASDIAAGFSAKSLSAQLINEAQNELELS--QGSEDNEGIKERTGFRLERRVAAV 122
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISIL 183
+ +L ++ + VG+ G V G+M F IA + N+ V PGI E+L++
Sbjct: 123 GRYMGRGNGYLATIGAISPFVGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGIAEALLATA 182
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
+GL +IP+ + YN F + + A + + SR + N S
Sbjct: 183 IGLVAAIPAVVIYNIFARQIGSYKATLGDVAAQVLLLQSRDLDLNAS 229
>gi|270156708|ref|ZP_06185365.1| protein TolQ [Legionella longbeachae D-4968]
gi|289164844|ref|YP_003454982.1| TolQ, involved in the tonB-independent uptake of proteins
[Legionella longbeachae NSW150]
gi|269988733|gb|EEZ94987.1| protein TolQ [Legionella longbeachae D-4968]
gi|288858017|emb|CBJ11877.1| putative TolQ, involved in the tonB-independent uptake of proteins
[Legionella longbeachae NSW150]
Length = 224
Score = 210 bits (535), Expect = 1e-52, Method: Composition-based stats.
Identities = 63/216 (29%), Positives = 112/216 (51%), Gaps = 7/216 (3%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLET 71
++ FMQ GL VK ++ LL SI SW++I Q++ F ++ F + FW L
Sbjct: 6 NVLMYFMQAGLVVKTVMLLLAAASITSWTLIFQRAWFFNQKKQLTDAFNRRFWESADLSR 65
Query: 72 VCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+ + ++ + G+AAIF S E+ ++ +G + + I R+M + A+E E++
Sbjct: 66 LYADVDSNSDERQGMAAIFHSGFREFIRARKQGNV----VIEPIQRVMQITHAKEAEKLE 121
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCV 188
L F S+ S VG+ G V G+M FQ++ + + PGI E+L++ LGL
Sbjct: 122 RHLPFFASVGSIAPYVGLFGTVWGIMTSFQALGHAQQATIAMVAPGISEALVATALGLFT 181
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+IP+ IAYN++ + + + F E +++ +Q
Sbjct: 182 AIPAVIAYNRYTTRANDLLNRFDLFQEELISLIEQQ 217
>gi|332091439|gb|EGI96524.1| tonB-system energizer ExbB [Shigella boydii 3594-74]
Length = 239
Score = 210 bits (535), Expect = 1e-52, Method: Composition-based stats.
Identities = 56/224 (25%), Positives = 109/224 (48%), Gaps = 4/224 (1%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
D+S++ ++ + VKC++ L + S+++W++ KSV F +R+ + +QL +S
Sbjct: 3 TDLSVWGMYQHADIVVKCVMIGLILASVVTWAIFFSKSVEFFNQKRRLKREQQLLAEARS 62
Query: 69 LETVCKSLKNHHNIGLA-AIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
L + + L+ +F A +E + S +G+ GI++R ++ +A +
Sbjct: 63 LNQANDIAADFGSKSLSLHLFNEAQNELELS--EGSDDNEGIKERTSFRLERRVAAVGRQ 120
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
+ +L ++ + VG+ G V G+M F IA + N+ V PGI E+L++ +GL
Sbjct: 121 MGRGNGYLATIGAISPFVGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGIAEALLATAIGL 180
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
+IP+ + YN F F + A + + SR + S
Sbjct: 181 VAAIPAVVIYNVFARQIGGFKAMLGDVAAQVLLLQSRDLDLEAS 224
>gi|167648385|ref|YP_001686048.1| protein TolQ [Caulobacter sp. K31]
gi|167350815|gb|ABZ73550.1| protein TolQ [Caulobacter sp. K31]
Length = 232
Score = 210 bits (535), Expect = 1e-52, Method: Composition-based stats.
Identities = 74/227 (32%), Positives = 117/227 (51%), Gaps = 4/227 (1%)
Query: 7 AIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG 66
S +LF+Q VK ++ L + S+ SW+VII K F + FE +G
Sbjct: 6 GPQSFSFISLFLQADWVVKGVMVGLILASLGSWAVIIDKLFRFSAMNSAANRFEDQVSAG 65
Query: 67 QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIG---IQDRIDRMMDVAIAR 123
Q LE V + L + +A+ EW+++ KG + RIDRM+D IAR
Sbjct: 66 QGLEEVAAQAGPNPRHPLPRMLQTALKEWREAKAKGVVGEAQAAFLIQRIDRMLDTLIAR 125
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISI 182
E + E L L +++A +G+ G V G+M FQ+IA + ++ V P I E+L +
Sbjct: 126 ETGKAEEGLGSLAIVATASPFIGLFGTVWGIMHAFQNIAISKNTSLAVVAPSIAEALFAT 185
Query: 183 LLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNI 229
+GL +IP+ IAYNKF D+ K+A ++E FA++ S + R+ +
Sbjct: 186 AIGLIAAIPAYIAYNKFSTDAGKYAGRLENFADDLSTAIQRRLSERV 232
>gi|330958284|gb|EGH58544.1| tolQ protein [Pseudomonas syringae pv. maculicola str. ES4326]
Length = 234
Score = 210 bits (534), Expect = 2e-52, Method: Composition-based stats.
Identities = 57/218 (26%), Positives = 106/218 (48%), Gaps = 1/218 (0%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
++++ L L VK ++ +L + S++SW +IIQ+S+ R F+Q F S L
Sbjct: 8 MTVWGLISDASLLVKAVMLILLLASLVSWFLIIQRSLALRQYERSLDAFQQRFRSETELA 67
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
+ G+ +F + +E+ + + P + ++R + VAI+ + ++ +
Sbjct: 68 PLYSRSAQEAADGIGQVFNAGYAEYVQLKQRPGIEPDTVLSGVERALQVAISEQELQLEK 127
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVS 189
L FL ++ S +G+ G V G+M F ++ + PGI E+LI+ +GL +
Sbjct: 128 GLQFLATVGSVSPYIGLFGTVWGIMNSFIGLSQVQQATLSTVAPGIAEALIATAIGLFAA 187
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEG 227
IP+ IAYN+F + + F NE L+R +G
Sbjct: 188 IPAVIAYNRFAARGQTLTARYYTFGNELQVRLNRTLQG 225
>gi|71892113|ref|YP_277845.1| hypothetical protein BPEN_345 [Candidatus Blochmannia
pennsylvanicus str. BPEN]
gi|71796219|gb|AAZ40970.1| TolQ [Candidatus Blochmannia pennsylvanicus str. BPEN]
Length = 249
Score = 210 bits (534), Expect = 2e-52, Method: Composition-based stats.
Identities = 71/230 (30%), Positives = 108/230 (46%), Gaps = 11/230 (4%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
++IF LF++ + V+ I +L FS+LSWS+I + + +R+ + FE FWSG L
Sbjct: 1 MNIFDLFLETNILVQISIFILIGFSVLSWSIIFHRIFVLSSAQRKLKVFENEFWSGIDLS 60
Query: 71 TVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
++ + H N G IF E+ K SP + R M AI EL+ +
Sbjct: 61 SLYQKAAAHRNKLNGAEQIFYVGFKEFSKLYQTKHCSPETMMSRTLDSMHTAINTELKSL 120
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVS---------IPGIIESL 179
+ + +G++ S +G+ G VLG++ F + + N V+ PGI ESL
Sbjct: 121 EDYIPLIGTIGSISPYLGLFGTVLGIIHVFIELGKTTATNNVATQMIHMQIVAPGIAESL 180
Query: 180 ISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNI 229
IS +GL V+IP+ IA+N F EF IL Q NI
Sbjct: 181 ISTAIGLFVAIPAVIAFNYLTTQINNMDQDYHNFIEEFITILYHQIFFNI 230
>gi|238909959|ref|ZP_04653796.1| biopolymer transport protein ExbB [Salmonella enterica subsp.
enterica serovar Tennessee str. CDC07-0191]
Length = 244
Score = 210 bits (534), Expect = 2e-52, Method: Composition-based stats.
Identities = 56/227 (24%), Positives = 107/227 (47%), Gaps = 4/227 (1%)
Query: 6 LAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS 65
L D+S++ ++ + VKC++ L + S+++W++ KSV F T +R+ + +
Sbjct: 5 LMQTDLSVWGMYQHADIVVKCVMIGLILASVVTWAIFFSKSVEFFTQKRRLKREQLQLAD 64
Query: 66 GQSLETVCKSLKNHHNIGL-AAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARE 124
+SL+ L A + A +E + S +G+ GI++R ++ +A
Sbjct: 65 ARSLDQASDIATGFSAKSLSAQLINEAQNELELS--QGSEDNEGIKERTGFRLERRVAAV 122
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISIL 183
+ +L ++ + VG+ G V G+M F IA + N+ V PGI E+L++
Sbjct: 123 GRYMGRGNGYLATIGAISPFVGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGIAEALLATA 182
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
+GL +IP+ + YN F + + A + + SR + N S
Sbjct: 183 IGLVAAIPAVVIYNIFARQIGSYKATLGDVAAQVLLLQSRDLDLNAS 229
>gi|146309076|ref|YP_001189541.1| MotA/TolQ/ExbB proton channel [Pseudomonas mendocina ymp]
gi|145577277|gb|ABP86809.1| Cell division and transport-associated protein TolQ [Pseudomonas
mendocina ymp]
Length = 236
Score = 210 bits (534), Expect = 2e-52, Method: Composition-based stats.
Identities = 55/219 (25%), Positives = 106/219 (48%), Gaps = 3/219 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
++++ L + L V+ ++ L + S++SW +I+Q+S R+ + F Q F L
Sbjct: 8 MTVWGLVSEASLLVQAVMLSLVLASLVSWYLIVQRSAVLRRSEREAKAFLQRFRGSAELA 67
Query: 71 TVCK--SLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ + + + + G+ +F + E+ + + + + + ++R + VAIA + E +
Sbjct: 68 QLQRECAAEADQDAGVQQLFQAGYGEYLQLQREPGIAADAVIEGVERSLLVAIAEQEERL 127
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
+ L L ++ S VG+ G V G+M F ++ + PGI E+LI+ +GL
Sbjct: 128 EKGLPLLATVGSVSPYVGLFGTVWGIMNSFIGLSQVQQATLSTVAPGIAEALIATAIGLF 187
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ IAYN+F + FANE L R+
Sbjct: 188 AAIPAVIAYNRFSARVAGLGARYYSFANELQGRLQRRLH 226
>gi|89053461|ref|YP_508912.1| MotA/TolQ/ExbB proton channel [Jannaschia sp. CCS1]
gi|88863010|gb|ABD53887.1| Cell division and transport-associated protein TolQ [Jannaschia sp.
CCS1]
Length = 230
Score = 210 bits (534), Expect = 2e-52, Method: Composition-based stats.
Identities = 79/230 (34%), Positives = 120/230 (52%), Gaps = 4/230 (1%)
Query: 1 MNNYGLAIM---DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFR 57
M LA+ D ++ ALF + L V+ ++ L + S+ W++ K F R
Sbjct: 1 METETLALANEADFTLIALFFRASLIVQLVMIALIVASVWVWAIAFSKFAMFRKARANAA 60
Query: 58 EFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMM 117
F+ FWSG+ L+ ++ +F++ M+EW++S G+Q R+DR M
Sbjct: 61 TFDATFWSGEPLDEYYDTVAEAPRSASERVFVAGMTEWRRSLRDDGALIPGVQQRVDRSM 120
Query: 118 DVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGII 176
DVAIARE +T L+FL + + VG+ G V G+M FQ IA ++ V PGI
Sbjct: 121 DVAIARESGRMTNGLTFLATTGATAPFVGLFGTVWGIMRSFQEIAISGQTSLAVVAPGIA 180
Query: 177 ESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
E+L++ LGL +IP+ I YNK D+ E FA+EFS +LSRQ +
Sbjct: 181 EALLATGLGLLAAIPAVILYNKLSNDADTIIGTYESFADEFSTLLSRQLD 230
>gi|113460405|ref|YP_718467.1| biopolymer transport protein [Haemophilus somnus 129PT]
gi|112822448|gb|ABI24537.1| Cell division and transport-associated protein TolQ [Haemophilus
somnus 129PT]
Length = 227
Score = 209 bits (533), Expect = 2e-52, Method: Composition-based stats.
Identities = 67/222 (30%), Positives = 114/222 (51%), Gaps = 3/222 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
++ LF++ + V+ +I +L FSI+SW++IIQ+S + FE+ FWSG+ L
Sbjct: 4 ELDFLELFLKASIVVQIVIVILISFSIISWAIIIQRSRILTRALKDSTLFEERFWSGEDL 63
Query: 70 ETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ L N N IF E+ + +P I R M++A+ RE+E+
Sbjct: 64 YKLYDGLSNRRNGLNSSERIFYVGFKEFNRLKQANPDAPEAIIQGSSRAMNLAMNREVED 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
+ ++ FL +++S +G+ G V G+M F +++G + + PGI E+LI+ +GL
Sbjct: 124 LETRVPFLATVASISPYIGLFGTVWGIMHAFMALSGAKQATLQMVAPGIAEALIATAIGL 183
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
+IP+ +AYN+ K F +EF+ IL RQ G
Sbjct: 184 FAAIPAVMAYNRLSLRVNKLEQNYANFIDEFTTILHRQAFGK 225
>gi|226943196|ref|YP_002798269.1| tonB-system proton channel, ExbB [Azotobacter vinelandii DJ]
gi|226718123|gb|ACO77294.1| tonB-system proton channel, ExbB [Azotobacter vinelandii DJ]
Length = 359
Score = 209 bits (533), Expect = 2e-52, Method: Composition-based stats.
Identities = 55/223 (24%), Positives = 108/223 (48%), Gaps = 5/223 (2%)
Query: 5 GLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFW 64
GLA D+S + ++ + VK ++ L + S+++W++ + K + + RR+ +
Sbjct: 122 GLA-HDLSPWGMYQNADIVVKGVMIGLLLASVVTWTIWMAKGLELLGARRRLQRSLADIK 180
Query: 65 SGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARE 124
++L+ +L + N A + A E + S G GI++R+ ++ +A
Sbjct: 181 GLRTLDQAS-ALPSGENCLRAKLIADAREELQLSA--GTIDKDGIKERVSFRLERLVAEC 237
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISIL 183
+++ L ++ S VG+ G V G+M F IA + N+ V PGI E+L++
Sbjct: 238 GRKMSVGTGVLATIGSTSPFVGLFGTVWGIMNSFIGIAKSQTTNLAVVAPGIAEALLATA 297
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+GL +IP+ I YN F + Q+ ++E ++SR +
Sbjct: 298 IGLVAAIPAVIIYNVFARSIAAYKAQVANLSSEVLLLVSRDLD 340
>gi|16761935|ref|NP_457552.1| biopolymer transport protein ExbB [Salmonella enterica subsp.
enterica serovar Typhi str. CT18]
gi|16766459|ref|NP_462074.1| biopolymer transport protein ExbB [Salmonella enterica subsp.
enterica serovar Typhimurium str. LT2]
gi|29143422|ref|NP_806764.1| biopolymer transport protein ExbB [Salmonella enterica subsp.
enterica serovar Typhi str. Ty2]
gi|161616141|ref|YP_001590106.1| biopolymer transport protein ExbB [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|167551932|ref|ZP_02345685.1| tonB-system energizer ExbB [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
gi|167990296|ref|ZP_02571396.1| tonB-system energizer ExbB [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|168231752|ref|ZP_02656810.1| tonB-system energizer ExbB [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
gi|168238112|ref|ZP_02663170.1| tonB-system energizer ExbB [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
gi|168242979|ref|ZP_02667911.1| tonB-system energizer ExbB [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
gi|168262888|ref|ZP_02684861.1| tonB-system energizer ExbB [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|168463637|ref|ZP_02697554.1| tonB-system energizer ExbB [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|194451250|ref|YP_002047155.1| biopolymer transport protein ExbB [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|194470700|ref|ZP_03076684.1| tonB-system energizer ExbB [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|194733979|ref|YP_002116115.1| biopolymer transport protein ExbB [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. CVM19633]
gi|197249773|ref|YP_002148081.1| biopolymer transport protein ExbB [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
gi|197266007|ref|ZP_03166081.1| tonB-system energizer ExbB [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|198244982|ref|YP_002217137.1| biopolymer transport protein ExbB [Salmonella enterica subsp.
enterica serovar Dublin str. CT_02021853]
gi|200387183|ref|ZP_03213795.1| tonB-system energizer ExbB [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|204927984|ref|ZP_03219184.1| tonB-system energizer ExbB [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
gi|205354076|ref|YP_002227877.1| biopolymer transport protein ExbB [Salmonella enterica subsp.
enterica serovar Gallinarum str. 287/91]
gi|207858418|ref|YP_002245069.1| biopolymer transport protein ExbB [Salmonella enterica subsp.
enterica serovar Enteritidis str. P125109]
gi|213028805|ref|ZP_03343252.1| biopolymer transport protein ExbB [Salmonella enterica subsp.
enterica serovar Typhi str. 404ty]
gi|213161298|ref|ZP_03347008.1| biopolymer transport protein ExbB [Salmonella enterica subsp.
enterica serovar Typhi str. E00-7866]
gi|213424365|ref|ZP_03357189.1| biopolymer transport protein ExbB [Salmonella enterica subsp.
enterica serovar Typhi str. E02-1180]
gi|213647425|ref|ZP_03377478.1| biopolymer transport protein ExbB [Salmonella enterica subsp.
enterica serovar Typhi str. J185]
gi|213851960|ref|ZP_03381492.1| biopolymer transport protein ExbB [Salmonella enterica subsp.
enterica serovar Typhi str. M223]
gi|289825772|ref|ZP_06544940.1| biopolymer transport protein ExbB [Salmonella enterica subsp.
enterica serovar Typhi str. E98-3139]
gi|60392257|sp|P0A1H7|EXBB_SALTY RecName: Full=Biopolymer transport protein exbB
gi|60392258|sp|P0A1H8|EXBB_SALTI RecName: Full=Biopolymer transport protein exbB
gi|25301393|pir||AF0886 biopolymer transport ExbB protein STY3332 [imported] - Salmonella
enterica subsp. enterica serovar Typhi (strain CT18)
gi|16421714|gb|AAL22033.1| uptake of enterochelin [Salmonella enterica subsp. enterica serovar
Typhimurium str. LT2]
gi|16504237|emb|CAD02990.1| biopolymer transport ExbB protein [Salmonella enterica subsp.
enterica serovar Typhi]
gi|29139056|gb|AAO70624.1| biopolymer transport ExbB protein [Salmonella enterica subsp.
enterica serovar Typhi str. Ty2]
gi|161365505|gb|ABX69273.1| hypothetical protein SPAB_03943 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194409554|gb|ACF69773.1| tonB-system energizer ExbB [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|194457064|gb|EDX45903.1| tonB-system energizer ExbB [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|194709481|gb|ACF88702.1| TonB-system energizer ExbB [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|195633697|gb|EDX52111.1| tonB-system energizer ExbB [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|197213476|gb|ACH50873.1| tonB-system energizer ExbB [Salmonella enterica subsp. enterica
serovar Agona str. SL483]
gi|197244262|gb|EDY26882.1| tonB-system energizer ExbB [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|197289035|gb|EDY28406.1| tonB-system energizer ExbB [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
gi|197939498|gb|ACH76831.1| tonB-system energizer ExbB [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|199604281|gb|EDZ02826.1| tonB-system energizer ExbB [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|204322306|gb|EDZ07503.1| tonB-system energizer ExbB [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
gi|205273857|emb|CAR38857.1| biopolymer transport ExbB protein [Salmonella enterica subsp.
enterica serovar Gallinarum str. 287/91]
gi|205323313|gb|EDZ11152.1| tonB-system energizer ExbB [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
gi|205331187|gb|EDZ17951.1| tonB-system energizer ExbB [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|205333747|gb|EDZ20511.1| tonB-system energizer ExbB [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
gi|205337928|gb|EDZ24692.1| tonB-system energizer ExbB [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
gi|205348481|gb|EDZ35112.1| tonB-system energizer ExbB [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|206710221|emb|CAR34578.1| biopolymer transport ExbB protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. P125109]
gi|261248289|emb|CBG26126.1| biopolymer transport ExbB protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. D23580]
gi|267995343|gb|ACY90228.1| biopolymer transport protein ExbB [Salmonella enterica subsp.
enterica serovar Typhimurium str. 14028S]
gi|301159713|emb|CBW19232.1| biopolymer transport ExbB protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. SL1344]
gi|312914183|dbj|BAJ38157.1| biopolymer transport protein ExbB [Salmonella enterica subsp.
enterica serovar Typhimurium str. T000240]
gi|321225836|gb|EFX50890.1| MotA/TolQ/ExbB proton channel family protein [Salmonella enterica
subsp. enterica serovar Typhimurium str. TN061786]
gi|322613561|gb|EFY10502.1| biopolymer transport protein ExbB [Salmonella enterica subsp.
enterica serovar Montevideo str. 315996572]
gi|322621153|gb|EFY18011.1| biopolymer transport protein ExbB [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-1]
gi|322624216|gb|EFY21050.1| biopolymer transport protein ExbB [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-3]
gi|322628045|gb|EFY24834.1| biopolymer transport protein ExbB [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-4]
gi|322633164|gb|EFY29906.1| biopolymer transport protein ExbB [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-1]
gi|322636259|gb|EFY32967.1| biopolymer transport protein ExbB [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-2]
gi|322639377|gb|EFY36066.1| biopolymer transport protein ExbB [Salmonella enterica subsp.
enterica serovar Montevideo str. 531954]
gi|322647472|gb|EFY43961.1| biopolymer transport protein ExbB [Salmonella enterica subsp.
enterica serovar Montevideo str. NC_MB110209-0054]
gi|322648655|gb|EFY45102.1| biopolymer transport protein ExbB [Salmonella enterica subsp.
enterica serovar Montevideo str. OH_2009072675]
gi|322653709|gb|EFY50035.1| biopolymer transport protein ExbB [Salmonella enterica subsp.
enterica serovar Montevideo str. CASC_09SCPH15965]
gi|322657816|gb|EFY54084.1| biopolymer transport protein ExbB [Salmonella enterica subsp.
enterica serovar Montevideo str. 19N]
gi|322663918|gb|EFY60117.1| biopolymer transport protein ExbB [Salmonella enterica subsp.
enterica serovar Montevideo str. 81038-01]
gi|322669070|gb|EFY65221.1| biopolymer transport protein ExbB [Salmonella enterica subsp.
enterica serovar Montevideo str. MD_MDA09249507]
gi|322672935|gb|EFY69042.1| biopolymer transport protein ExbB [Salmonella enterica subsp.
enterica serovar Montevideo str. 414877]
gi|322678073|gb|EFY74136.1| biopolymer transport protein ExbB [Salmonella enterica subsp.
enterica serovar Montevideo str. 366867]
gi|322681250|gb|EFY77283.1| biopolymer transport protein ExbB [Salmonella enterica subsp.
enterica serovar Montevideo str. 413180]
gi|322687820|gb|EFY83787.1| biopolymer transport protein ExbB [Salmonella enterica subsp.
enterica serovar Montevideo str. 446600]
gi|323131517|gb|ADX18947.1| biopolymer transport protein ExbB [Salmonella enterica subsp.
enterica serovar Typhimurium str. 4/74]
gi|323195631|gb|EFZ80808.1| biopolymer transport protein ExbB [Salmonella enterica subsp.
enterica serovar Montevideo str. 609458-1]
gi|323199687|gb|EFZ84777.1| biopolymer transport protein ExbB [Salmonella enterica subsp.
enterica serovar Montevideo str. 556150-1]
gi|323202565|gb|EFZ87605.1| biopolymer transport protein ExbB [Salmonella enterica subsp.
enterica serovar Montevideo str. 609460]
gi|323207947|gb|EFZ92893.1| biopolymer transport protein ExbB [Salmonella enterica subsp.
enterica serovar Montevideo str. 507440-20]
gi|323212500|gb|EFZ97317.1| biopolymer transport protein ExbB [Salmonella enterica subsp.
enterica serovar Montevideo str. 556152]
gi|323215017|gb|EFZ99765.1| biopolymer transport protein ExbB [Salmonella enterica subsp.
enterica serovar Montevideo str. MB101509-0077]
gi|323222747|gb|EGA07112.1| biopolymer transport protein ExbB [Salmonella enterica subsp.
enterica serovar Montevideo str. MB102109-0047]
gi|323224171|gb|EGA08464.1| biopolymer transport protein ExbB [Salmonella enterica subsp.
enterica serovar Montevideo str. MB110209-0055]
gi|323230496|gb|EGA14614.1| biopolymer transport protein ExbB [Salmonella enterica subsp.
enterica serovar Montevideo str. MB111609-0052]
gi|323235153|gb|EGA19239.1| biopolymer transport protein ExbB [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009083312]
gi|323239193|gb|EGA23243.1| biopolymer transport protein ExbB [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009085258]
gi|323244450|gb|EGA28456.1| biopolymer transport protein ExbB [Salmonella enterica subsp.
enterica serovar Montevideo str. 315731156]
gi|323247065|gb|EGA31031.1| biopolymer transport protein ExbB [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2009159199]
gi|323253453|gb|EGA37282.1| biopolymer transport protein ExbB [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008282]
gi|323256241|gb|EGA39977.1| biopolymer transport protein ExbB [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008283]
gi|323262584|gb|EGA46140.1| biopolymer transport protein ExbB [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008284]
gi|323267321|gb|EGA50805.1| biopolymer transport protein ExbB [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008285]
gi|323269276|gb|EGA52731.1| biopolymer transport protein ExbB [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008287]
gi|326629193|gb|EGE35536.1| biopolymer transport protein ExbB [Salmonella enterica subsp.
enterica serovar Gallinarum str. 9]
gi|332990024|gb|AEF09007.1| biopolymer transport protein ExbB [Salmonella enterica subsp.
enterica serovar Typhimurium str. UK-1]
Length = 244
Score = 209 bits (533), Expect = 2e-52, Method: Composition-based stats.
Identities = 56/227 (24%), Positives = 107/227 (47%), Gaps = 4/227 (1%)
Query: 6 LAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS 65
L D+S++ ++ + VKC++ L + S+++W++ KSV F T +R+ + +
Sbjct: 5 LMQTDLSVWGMYQHADIVVKCVMIGLILASVVTWAIFFSKSVEFFTQKRRLKREQLQLAD 64
Query: 66 GQSLETVCKSLKNHHNIGL-AAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARE 124
+SL+ L A + A +E + S +G+ GI++R ++ +A
Sbjct: 65 ARSLDQASDIAAGFSAKSLSAQLINEAQNELELS--QGSEDNEGIKERTGFRLERRVAAV 122
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISIL 183
+ +L ++ + VG+ G V G+M F IA + N+ V PGI E+L++
Sbjct: 123 GRYMGRGNGYLATIGAISPFVGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGIAEALLATA 182
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
+GL +IP+ + YN F + + A + + SR + N S
Sbjct: 183 IGLVAAIPAVVIYNIFARQIGSYKATLGDVAAQVLLLQSRDLDLNAS 229
>gi|296136872|ref|YP_003644114.1| protein TolQ [Thiomonas intermedia K12]
gi|295796994|gb|ADG31784.1| protein TolQ [Thiomonas intermedia K12]
Length = 250
Score = 209 bits (533), Expect = 2e-52, Method: Composition-based stats.
Identities = 73/220 (33%), Positives = 113/220 (51%), Gaps = 3/220 (1%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
+ SI ++ + + V+ ++ LL S+ SW+VI +K + R + +FEQ FWSG
Sbjct: 3 QNFSIVSMVLGASIVVQLVLALLLSVSLASWTVIFRKYFAIKSARVKSEDFEQEFWSGTG 62
Query: 69 LETVCKSL--KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
L + +S H L IF S M E+ K ++ + D R M A RE++
Sbjct: 63 LNDLYQSALSNGRHGSPLQRIFASGMREYLKLRERHVLDGSTLVDGARRAMRAAFQREMD 122
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLG 185
+ LSFL S+ S VG+ G V G+M F ++ + ++ PGI E+L++ +G
Sbjct: 123 ALEANLSFLASVGSVSPYVGLFGTVWGIMHAFVGLSNLQQVTLATVAPGIAEALVATAIG 182
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
L +IP+ IAYN F D + A + E F EFS IL RQ+
Sbjct: 183 LFAAIPAVIAYNFFARDIDRLANRYESFTEEFSNILQRQS 222
>gi|170717554|ref|YP_001783485.1| Tol-Pal system TolQ [Haemophilus somnus 2336]
gi|168825683|gb|ACA31054.1| Tol-Pal system TolQ [Haemophilus somnus 2336]
Length = 227
Score = 209 bits (533), Expect = 2e-52, Method: Composition-based stats.
Identities = 66/222 (29%), Positives = 113/222 (50%), Gaps = 3/222 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
++ LF++ + V+ +I +L FSI+SW++IIQ+S + FE+ FWSG+ L
Sbjct: 4 ELDFLELFLKASIVVQIVIVILISFSIISWAIIIQRSRILTRALKDSTLFEERFWSGEDL 63
Query: 70 ETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ L N N IF E+ + +P I R M++ + RE+E+
Sbjct: 64 YKLYDGLSNRRNGLNSSERIFYVGFKEFNRLKQANPDAPEAIIQGSSRAMNLTMNREVED 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
+ ++ FL +++S +G+ G V G+M F +++G + + PGI E+LI+ +GL
Sbjct: 124 LETRVPFLATVASISPYIGLFGTVWGIMHAFMALSGAKQATLQMVAPGIAEALIATAIGL 183
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
+IP+ +AYN+ K F +EF+ IL RQ G
Sbjct: 184 FAAIPAVMAYNRLSLRVNKLEQNYANFIDEFTTILHRQAFGK 225
>gi|71275799|ref|ZP_00652083.1| MotA/TolQ/ExbB proton channel [Xylella fastidiosa Dixon]
gi|71900398|ref|ZP_00682531.1| MotA/TolQ/ExbB proton channel [Xylella fastidiosa Ann-1]
gi|170730221|ref|YP_001775654.1| TolQ protein [Xylella fastidiosa M12]
gi|71163377|gb|EAO13095.1| MotA/TolQ/ExbB proton channel [Xylella fastidiosa Dixon]
gi|71729830|gb|EAO31928.1| MotA/TolQ/ExbB proton channel [Xylella fastidiosa Ann-1]
gi|167965014|gb|ACA12024.1| TolQ protein [Xylella fastidiosa M12]
Length = 257
Score = 209 bits (533), Expect = 2e-52, Method: Composition-based stats.
Identities = 69/225 (30%), Positives = 112/225 (49%), Gaps = 4/225 (1%)
Query: 5 GLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFW 64
G I+ L ++ + VK I+ LL + S SW +I +K+ F R+ +FE FW
Sbjct: 29 GTTHGGINYIDLMLKASIPVKIIVLLLLLGSFTSWVIIFRKARVFKQANREADQFENRFW 88
Query: 65 SGQSLETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIA 122
SG L + S + + GL AIF E+ + ++ P + R+M
Sbjct: 89 SGTDLSKLYASTNSRKHMVSGLEAIFEGGFREFTRLRERRRLDPRIQIEGAQRVMRTNFM 148
Query: 123 RELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLI 180
RE++++ L L ++ S VG++G V G+M + +G + PGI E+L
Sbjct: 149 REMDQLERNLELLANIGSTAPYVGLVGTVFGIMVTMHDMISSGDQAGIAAVAPGISEALF 208
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+ +GL V+IP+ AYN+F ++ +++ E FA EFSAIL RQ
Sbjct: 209 ATAVGLFVAIPAVWAYNRFTTRVERLSVRYETFAEEFSAILQRQV 253
>gi|156932496|ref|YP_001436412.1| biopolymer transport protein ExbB [Cronobacter sakazakii ATCC
BAA-894]
gi|156530750|gb|ABU75576.1| hypothetical protein ESA_00276 [Cronobacter sakazakii ATCC BAA-894]
Length = 239
Score = 209 bits (532), Expect = 3e-52, Method: Composition-based stats.
Identities = 50/224 (22%), Positives = 103/224 (45%), Gaps = 4/224 (1%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
D+S++ ++ + VK ++ L + S+++W++ KSV +R+ + +Q ++
Sbjct: 3 TDLSVWGMYQHADIVVKIVMIGLILASVVTWAIFFSKSVELSGHKRRLKREQQELAGART 62
Query: 69 LETVCKSLKNHHNIGL-AAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
L+ + + L A + A +E + G+ GI++R ++ +A
Sbjct: 63 LDDAREMAERFGPKSLSARLIEEAQNE--RELSAGSEDNEGIKERTGFRLERRVAAAGRH 120
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
+ +L ++ + VG+ G V G+M F IA + N+ V PGI E+L++ +GL
Sbjct: 121 MGRGNGYLATIGAISPFVGLFGTVWGIMNSFIGIAQSQTTNLAVVAPGIAEALLATAIGL 180
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
+IP+ + YN F + + A + + SR + S
Sbjct: 181 VAAIPAVVIYNIFARTIGSYKATLGDVAAQVLLLQSRDLDLEAS 224
>gi|301019984|ref|ZP_07184117.1| TonB-system energizer ExbB [Escherichia coli MS 196-1]
gi|331664621|ref|ZP_08365527.1| TonB-system energizer ExbB [Escherichia coli TA143]
gi|299881990|gb|EFI90201.1| TonB-system energizer ExbB [Escherichia coli MS 196-1]
gi|331058552|gb|EGI30533.1| TonB-system energizer ExbB [Escherichia coli TA143]
Length = 244
Score = 209 bits (532), Expect = 3e-52, Method: Composition-based stats.
Identities = 57/227 (25%), Positives = 110/227 (48%), Gaps = 4/227 (1%)
Query: 6 LAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS 65
L D+S++ ++ + VKC++ L + S+++W++ KSV F T +R+ + +QL
Sbjct: 5 LMQTDLSVWGMYQHADIVVKCVMIGLILASVVTWAIFFSKSVEFFTQKRRLKREQQLLAE 64
Query: 66 GQSLETVCKSLKNHHNIGLA-AIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARE 124
+SL + + L+ + A +E + S +G+ GI++R ++ +A
Sbjct: 65 ARSLNQANDIAADFGSKSLSLHLLNEAQNELELS--EGSDDNEGIKERTSFRLERRVAAV 122
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISIL 183
++ +L ++ + VG+ G V G+M F IA + N+ V PGI E+L++
Sbjct: 123 GRQMGRGNGYLATIGAISPFVGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGIAEALLATA 182
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
+GL +IP+ + YN F F + A + + SR + S
Sbjct: 183 IGLVAAIPAVVIYNVFARQIGGFKAMLGDVAAQVLLLQSRDLDLEAS 229
>gi|15803550|ref|NP_289583.1| biopolymer transport protein ExbB [Escherichia coli O157:H7 EDL933]
gi|15833144|ref|NP_311917.1| biopolymer transport protein ExbB [Escherichia coli O157:H7 str.
Sakai]
gi|16130904|ref|NP_417479.1| membrane spanning protein in TonB-ExbB-ExbD complex [Escherichia
coli str. K-12 substr. MG1655]
gi|74313549|ref|YP_311968.1| biopolymer transport protein ExbB [Shigella sonnei Ss046]
gi|82778226|ref|YP_404575.1| biopolymer transport protein ExbB [Shigella dysenteriae Sd197]
gi|89109778|ref|AP_003558.1| membrane spanning protein in TonB-ExbB-ExbD complex [Escherichia
coli str. K-12 substr. W3110]
gi|91212418|ref|YP_542404.1| biopolymer transport protein ExbB [Escherichia coli UTI89]
gi|117625309|ref|YP_854510.1| biopolymer transport protein ExbB [Escherichia coli APEC O1]
gi|157156078|ref|YP_001464472.1| biopolymer transport protein ExbB [Escherichia coli E24377A]
gi|168747488|ref|ZP_02772510.1| TonB-system energizer ExbB [Escherichia coli O157:H7 str. EC4113]
gi|168753971|ref|ZP_02778978.1| TonB-system energizer ExbB [Escherichia coli O157:H7 str. EC4401]
gi|168760162|ref|ZP_02785169.1| TonB-system energizer ExbB [Escherichia coli O157:H7 str. EC4501]
gi|168767025|ref|ZP_02792032.1| TonB-system energizer ExbB [Escherichia coli O157:H7 str. EC4486]
gi|168773341|ref|ZP_02798348.1| TonB-system energizer ExbB [Escherichia coli O157:H7 str. EC4196]
gi|168781878|ref|ZP_02806885.1| TonB-system energizer ExbB [Escherichia coli O157:H7 str. EC4076]
gi|168785876|ref|ZP_02810883.1| TonB-system energizer ExbB [Escherichia coli O157:H7 str. EC869]
gi|168797594|ref|ZP_02822601.1| TonB-system energizer ExbB [Escherichia coli O157:H7 str. EC508]
gi|170018738|ref|YP_001723692.1| biopolymer transport protein ExbB [Escherichia coli ATCC 8739]
gi|170082551|ref|YP_001731871.1| membrane spanning protein in TonB-ExbB-ExbD complex [Escherichia
coli str. K-12 substr. DH10B]
gi|170680008|ref|YP_001745271.1| biopolymer transport protein ExbB [Escherichia coli SMS-3-5]
gi|188492681|ref|ZP_02999951.1| tonB-system energizer ExbB [Escherichia coli 53638]
gi|191167568|ref|ZP_03029380.1| TonB-system energizer ExbB [Escherichia coli B7A]
gi|191172531|ref|ZP_03034071.1| TonB-system energizer ExbB [Escherichia coli F11]
gi|193062063|ref|ZP_03043159.1| TonB-system energizer ExbB [Escherichia coli E22]
gi|193067250|ref|ZP_03048218.1| TonB-system energizer ExbB [Escherichia coli E110019]
gi|194426357|ref|ZP_03058912.1| TonB-system energizer ExbB [Escherichia coli B171]
gi|194431783|ref|ZP_03064074.1| TonB-system energizer ExbB [Shigella dysenteriae 1012]
gi|194436750|ref|ZP_03068850.1| TonB-system energizer ExbB [Escherichia coli 101-1]
gi|195937151|ref|ZP_03082533.1| biopolymer transport protein ExbB [Escherichia coli O157:H7 str.
EC4024]
gi|208807245|ref|ZP_03249582.1| tonB-system energizer ExbB [Escherichia coli O157:H7 str. EC4206]
gi|208813577|ref|ZP_03254906.1| tonB-system energizer ExbB [Escherichia coli O157:H7 str. EC4045]
gi|208818524|ref|ZP_03258844.1| tonB-system energizer ExbB [Escherichia coli O157:H7 str. EC4042]
gi|209397203|ref|YP_002272484.1| tonB-system energizer ExbB [Escherichia coli O157:H7 str. EC4115]
gi|209920481|ref|YP_002294565.1| biopolymer transport protein ExbB [Escherichia coli SE11]
gi|215488331|ref|YP_002330762.1| biopolymer transport protein ExbB [Escherichia coli O127:H6 str.
E2348/69]
gi|217327909|ref|ZP_03443992.1| tonB-system energizer ExbB [Escherichia coli O157:H7 str. TW14588]
gi|218555579|ref|YP_002388492.1| biopolymer transport protein ExbB [Escherichia coli IAI1]
gi|218560080|ref|YP_002392993.1| biopolymer transport protein ExbB [Escherichia coli S88]
gi|218691296|ref|YP_002399508.1| biopolymer transport protein ExbB [Escherichia coli ED1a]
gi|218696715|ref|YP_002404382.1| biopolymer transport protein ExbB [Escherichia coli 55989]
gi|218701779|ref|YP_002409408.1| biopolymer transport protein ExbB [Escherichia coli IAI39]
gi|218706634|ref|YP_002414153.1| biopolymer transport protein ExbB [Escherichia coli UMN026]
gi|227887711|ref|ZP_04005516.1| biopolymer transport protein ExbB [Escherichia coli 83972]
gi|237706248|ref|ZP_04536729.1| biopolymer transporter ExbB [Escherichia sp. 3_2_53FAA]
gi|238902121|ref|YP_002927917.1| membrane spanning protein in TonB-ExbB-ExbD complex [Escherichia
coli BW2952]
gi|253772156|ref|YP_003034987.1| biopolymer transporter ExbB [Escherichia coli 'BL21-Gold(DE3)pLysS
AG']
gi|254038176|ref|ZP_04872234.1| biopolymer transporter ExbB [Escherichia sp. 1_1_43]
gi|254162957|ref|YP_003046065.1| biopolymer transport protein ExbB [Escherichia coli B str. REL606]
gi|254794961|ref|YP_003079798.1| biopolymer transport protein ExbB [Escherichia coli O157:H7 str.
TW14359]
gi|256019072|ref|ZP_05432937.1| biopolymer transport protein ExbB [Shigella sp. D9]
gi|256024410|ref|ZP_05438275.1| biopolymer transport protein ExbB [Escherichia sp. 4_1_40B]
gi|260845765|ref|YP_003223543.1| membrane spanning protein ExbB [Escherichia coli O103:H2 str.
12009]
gi|260857144|ref|YP_003231035.1| membrane spanning protein ExbB [Escherichia coli O26:H11 str.
11368]
gi|260869765|ref|YP_003236167.1| membrane spanning protein ExbB [Escherichia coli O111:H- str.
11128]
gi|261228020|ref|ZP_05942301.1| membrane spanning protein in TonB-ExbB-ExbD complex [Escherichia
coli O157:H7 str. FRIK2000]
gi|261254877|ref|ZP_05947410.1| membrane spanning protein ExbB [Escherichia coli O157:H7 str.
FRIK966]
gi|291284387|ref|YP_003501205.1| Biopolymer transport protein exbB [Escherichia coli O55:H7 str.
CB9615]
gi|293406623|ref|ZP_06650549.1| biopolymer transporter ExbB [Escherichia coli FVEC1412]
gi|293412383|ref|ZP_06655106.1| tonB-system energizer ExbB [Escherichia coli B354]
gi|293416450|ref|ZP_06659089.1| tonB-system energizer ExbB [Escherichia coli B185]
gi|293449353|ref|ZP_06663774.1| tonB-system energizer ExbB [Escherichia coli B088]
gi|298382362|ref|ZP_06991959.1| biopolymer transporter exbB [Escherichia coli FVEC1302]
gi|307139696|ref|ZP_07499052.1| biopolymer transport protein ExbB [Escherichia coli H736]
gi|307310361|ref|ZP_07590009.1| tonB-system energizer ExbB [Escherichia coli W]
gi|331643708|ref|ZP_08344839.1| TonB-system energizer ExbB [Escherichia coli H736]
gi|331648796|ref|ZP_08349884.1| TonB-system energizer ExbB [Escherichia coli M605]
gi|331669972|ref|ZP_08370817.1| TonB-system energizer ExbB [Escherichia coli TA271]
gi|331674557|ref|ZP_08375317.1| TonB-system energizer ExbB [Escherichia coli TA280]
gi|331679081|ref|ZP_08379753.1| TonB-system energizer ExbB [Escherichia coli H591]
gi|332280174|ref|ZP_08392587.1| membrane spanning protein in TonB-ExbB-ExbD complex [Shigella sp.
D9]
gi|78099974|sp|P0ABU8|EXBB_ECO57 RecName: Full=Biopolymer transport protein exbB
gi|78099975|sp|P0ABU7|EXBB_ECOLI RecName: Full=Biopolymer transport protein exbB
gi|12517572|gb|AAG58142.1|AE005530_8 uptake of enterochelin; tonB-dependent uptake of B colicins
[Escherichia coli O157:H7 str. EDL933]
gi|882535|gb|AAA69173.1| exbB [Escherichia coli str. K-12 substr. MG1655]
gi|1789381|gb|AAC76042.1| membrane spanning protein in TonB-ExbB-ExbD complex [Escherichia
coli str. K-12 substr. MG1655]
gi|13363362|dbj|BAB37313.1| biopolymer transport ExbB protein [Escherichia coli O157:H7 str.
Sakai]
gi|73857026|gb|AAZ89733.1| uptake of enterochelin; tonB-dependent uptake of B colicins
[Shigella sonnei Ss046]
gi|81242374|gb|ABB63084.1| ExbB [Shigella dysenteriae Sd197]
gi|85675811|dbj|BAE77064.1| membrane spanning protein in TonB-ExbB-ExbD complex [Escherichia
coli str. K12 substr. W3110]
gi|91073992|gb|ABE08873.1| TonB-dependent enterochelin uptake protein [Escherichia coli UTI89]
gi|115514433|gb|ABJ02508.1| membrane spanning protein in TonB-ExbB-ExbD complex [Escherichia
coli APEC O1]
gi|157078108|gb|ABV17816.1| TonB-system energizer ExbB [Escherichia coli E24377A]
gi|169753666|gb|ACA76365.1| tonB-system energizer ExbB [Escherichia coli ATCC 8739]
gi|169890386|gb|ACB04093.1| membrane spanning protein in TonB-ExbB-ExbD complex [Escherichia
coli str. K-12 substr. DH10B]
gi|170517726|gb|ACB15904.1| TonB-system energizer ExbB [Escherichia coli SMS-3-5]
gi|187770997|gb|EDU34841.1| TonB-system energizer ExbB [Escherichia coli O157:H7 str. EC4196]
gi|188017796|gb|EDU55918.1| TonB-system energizer ExbB [Escherichia coli O157:H7 str. EC4113]
gi|188487880|gb|EDU62983.1| tonB-system energizer ExbB [Escherichia coli 53638]
gi|189000633|gb|EDU69619.1| TonB-system energizer ExbB [Escherichia coli O157:H7 str. EC4076]
gi|189358565|gb|EDU76984.1| TonB-system energizer ExbB [Escherichia coli O157:H7 str. EC4401]
gi|189363812|gb|EDU82231.1| TonB-system energizer ExbB [Escherichia coli O157:H7 str. EC4486]
gi|189369243|gb|EDU87659.1| TonB-system energizer ExbB [Escherichia coli O157:H7 str. EC4501]
gi|189373966|gb|EDU92382.1| TonB-system energizer ExbB [Escherichia coli O157:H7 str. EC869]
gi|189379738|gb|EDU98154.1| TonB-system energizer ExbB [Escherichia coli O157:H7 str. EC508]
gi|190902425|gb|EDV62162.1| TonB-system energizer ExbB [Escherichia coli B7A]
gi|190907199|gb|EDV66798.1| TonB-system energizer ExbB [Escherichia coli F11]
gi|192932283|gb|EDV84881.1| TonB-system energizer ExbB [Escherichia coli E22]
gi|192959207|gb|EDV89642.1| TonB-system energizer ExbB [Escherichia coli E110019]
gi|194415665|gb|EDX31932.1| TonB-system energizer ExbB [Escherichia coli B171]
gi|194420139|gb|EDX36217.1| TonB-system energizer ExbB [Shigella dysenteriae 1012]
gi|194424232|gb|EDX40219.1| TonB-system energizer ExbB [Escherichia coli 101-1]
gi|208727046|gb|EDZ76647.1| tonB-system energizer ExbB [Escherichia coli O157:H7 str. EC4206]
gi|208734854|gb|EDZ83541.1| tonB-system energizer ExbB [Escherichia coli O157:H7 str. EC4045]
gi|208738647|gb|EDZ86329.1| tonB-system energizer ExbB [Escherichia coli O157:H7 str. EC4042]
gi|209158603|gb|ACI36036.1| tonB-system energizer ExbB [Escherichia coli O157:H7 str. EC4115]
gi|209759718|gb|ACI78171.1| biopolymer transport ExbB protein [Escherichia coli]
gi|209759720|gb|ACI78172.1| biopolymer transport ExbB protein [Escherichia coli]
gi|209759722|gb|ACI78173.1| biopolymer transport ExbB protein [Escherichia coli]
gi|209759724|gb|ACI78174.1| biopolymer transport ExbB protein [Escherichia coli]
gi|209759726|gb|ACI78175.1| biopolymer transport ExbB protein [Escherichia coli]
gi|209913740|dbj|BAG78814.1| biopolymer transport protein [Escherichia coli SE11]
gi|215266403|emb|CAS10841.1| membrane spanning protein ExbB in TonB-ExbB-ExbD complex
[Escherichia coli O127:H6 str. E2348/69]
gi|217320276|gb|EEC28701.1| tonB-system energizer ExbB [Escherichia coli O157:H7 str. TW14588]
gi|218353447|emb|CAU99531.1| membrane spanning protein in TonB-ExbB-ExbD complex [Escherichia
coli 55989]
gi|218362347|emb|CAQ99969.1| membrane spanning protein in TonB-ExbB-ExbD complex [Escherichia
coli IAI1]
gi|218366849|emb|CAR04619.1| membrane spanning protein in TonB-ExbB-ExbD complex [Escherichia
coli S88]
gi|218371765|emb|CAR19618.1| membrane spanning protein in TonB-ExbB-ExbD complex [Escherichia
coli IAI39]
gi|218428860|emb|CAR09805.2| membrane spanning protein in TonB-ExbB-ExbD complex [Escherichia
coli ED1a]
gi|218433731|emb|CAR14648.1| membrane spanning protein in TonB-ExbB-ExbD complex [Escherichia
coli UMN026]
gi|222034727|emb|CAP77469.1| biopolymer transport exbB protein [Escherichia coli LF82]
gi|226839800|gb|EEH71821.1| biopolymer transporter ExbB [Escherichia sp. 1_1_43]
gi|226899288|gb|EEH85547.1| biopolymer transporter ExbB [Escherichia sp. 3_2_53FAA]
gi|227835107|gb|EEJ45573.1| biopolymer transport protein ExbB [Escherichia coli 83972]
gi|238861747|gb|ACR63745.1| membrane spanning protein in TonB-ExbB-ExbD complex [Escherichia
coli BW2952]
gi|242378560|emb|CAQ33347.1| ExbB protein; uptake of enterochelin; tonB-dependent uptake of B
colicins, subunit of TonB energy transducing system,
vitamin B12 outer membrane transport complex, vitamin
B12 transport system, Outer Membrane Ferric Enterobactin
Transport System, Ferric Enterobactin Transport System,
Outer Membrane Ferrichrome Transport System, ferrichrome
uptake system, Outer Membrane Ferric Citrate Transport
System and ferric dicitrate uptake system [Escherichia
coli BL21(DE3)]
gi|253323200|gb|ACT27802.1| tonB-system energizer ExbB [Escherichia coli 'BL21-Gold(DE3)pLysS
AG']
gi|253974858|gb|ACT40529.1| membrane spanning protein in TonB-ExbB-ExbD complex [Escherichia
coli B str. REL606]
gi|253979014|gb|ACT44684.1| membrane spanning protein in TonB-ExbB-ExbD complex [Escherichia
coli BL21(DE3)]
gi|254594361|gb|ACT73722.1| membrane spanning protein in TonB-ExbB-ExbD complex [Escherichia
coli O157:H7 str. TW14359]
gi|257755793|dbj|BAI27295.1| membrane spanning protein ExbB [Escherichia coli O26:H11 str.
11368]
gi|257760912|dbj|BAI32409.1| membrane spanning protein ExbB [Escherichia coli O103:H2 str.
12009]
gi|257766121|dbj|BAI37616.1| membrane spanning protein ExbB [Escherichia coli O111:H- str.
11128]
gi|260447955|gb|ACX38377.1| tonB-system energizer ExbB [Escherichia coli DH1]
gi|281180045|dbj|BAI56375.1| biopolymer transport protein [Escherichia coli SE15]
gi|284923031|emb|CBG36124.1| biopolymer transport protein [Escherichia coli 042]
gi|290764260|gb|ADD58221.1| Biopolymer transport protein exbB [Escherichia coli O55:H7 str.
CB9615]
gi|291322443|gb|EFE61872.1| tonB-system energizer ExbB [Escherichia coli B088]
gi|291426629|gb|EFE99661.1| biopolymer transporter ExbB [Escherichia coli FVEC1412]
gi|291431806|gb|EFF04789.1| tonB-system energizer ExbB [Escherichia coli B185]
gi|291469154|gb|EFF11645.1| tonB-system energizer ExbB [Escherichia coli B354]
gi|294491817|gb|ADE90573.1| TonB-system energizer ExbB [Escherichia coli IHE3034]
gi|298277502|gb|EFI19018.1| biopolymer transporter exbB [Escherichia coli FVEC1302]
gi|306909256|gb|EFN39751.1| tonB-system energizer ExbB [Escherichia coli W]
gi|307625392|gb|ADN69696.1| biopolymer transport protein ExbB [Escherichia coli UM146]
gi|309703439|emb|CBJ02779.1| biopolymer transport protein [Escherichia coli ETEC H10407]
gi|312947565|gb|ADR28392.1| biopolymer transport protein ExbB [Escherichia coli O83:H1 str. NRG
857C]
gi|315062322|gb|ADT76649.1| membrane spanning protein in TonB-ExbB-ExbD complex [Escherichia
coli W]
gi|315137602|dbj|BAJ44761.1| biopolymer transport protein exbB [Escherichia coli DH1]
gi|320180965|gb|EFW55886.1| MotA/TolQ/ExbB proton channel family protein [Shigella boydii ATCC
9905]
gi|320189361|gb|EFW64020.1| MotA/TolQ/ExbB proton channel family protein [Escherichia coli
O157:H7 str. EC1212]
gi|320195155|gb|EFW69784.1| MotA/TolQ/ExbB proton channel family protein [Escherichia coli
WV_060327]
gi|320201922|gb|EFW76497.1| MotA/TolQ/ExbB proton channel family protein [Escherichia coli
EC4100B]
gi|320640082|gb|EFX09654.1| biopolymer transport protein ExbB [Escherichia coli O157:H7 str.
G5101]
gi|320645380|gb|EFX14389.1| biopolymer transport protein ExbB [Escherichia coli O157:H- str.
493-89]
gi|320650693|gb|EFX19150.1| biopolymer transport protein ExbB [Escherichia coli O157:H- str. H
2687]
gi|320656387|gb|EFX24294.1| biopolymer transport protein ExbB [Escherichia coli O55:H7 str.
3256-97 TW 07815]
gi|320661760|gb|EFX29168.1| biopolymer transport protein ExbB [Escherichia coli O55:H7 str.
USDA 5905]
gi|320666911|gb|EFX33887.1| biopolymer transport protein ExbB [Escherichia coli O157:H7 str.
LSU-61]
gi|323377092|gb|ADX49360.1| tonB-system energizer ExbB [Escherichia coli KO11]
gi|326337715|gb|EGD61549.1| MotA/TolQ/ExbB proton channel family protein [Escherichia coli
O157:H7 str. 1125]
gi|326347279|gb|EGD71004.1| MotA/TolQ/ExbB proton channel family protein [Escherichia coli
O157:H7 str. 1044]
gi|330909062|gb|EGH37576.1| motA/TolQ/ExbB proton channel family protein [Escherichia coli
AA86]
gi|331037179|gb|EGI09403.1| TonB-system energizer ExbB [Escherichia coli H736]
gi|331042543|gb|EGI14685.1| TonB-system energizer ExbB [Escherichia coli M605]
gi|331062885|gb|EGI34799.1| TonB-system energizer ExbB [Escherichia coli TA271]
gi|331068651|gb|EGI40046.1| TonB-system energizer ExbB [Escherichia coli TA280]
gi|331073146|gb|EGI44469.1| TonB-system energizer ExbB [Escherichia coli H591]
gi|332102526|gb|EGJ05872.1| membrane spanning protein in TonB-ExbB-ExbD complex [Shigella sp.
D9]
Length = 244
Score = 209 bits (532), Expect = 3e-52, Method: Composition-based stats.
Identities = 56/227 (24%), Positives = 109/227 (48%), Gaps = 4/227 (1%)
Query: 6 LAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS 65
L D+S++ ++ + VKC++ L + S+++W++ KSV F +R+ + +QL
Sbjct: 5 LMQTDLSVWGMYQHADIVVKCVMIGLILASVVTWAIFFSKSVEFFNQKRRLKREQQLLAE 64
Query: 66 GQSLETVCKSLKNHHNIGLA-AIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARE 124
+SL + + L+ + A +E + S +G+ GI++R ++ +A
Sbjct: 65 ARSLNQANDIAADFGSKSLSLHLLNEAQNELELS--EGSDDNEGIKERTSFRLERRVAAV 122
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISIL 183
++ +L ++ + VG+ G V G+M F IA + N+ V PGI E+L++
Sbjct: 123 GRQMGRGNGYLATIGAISPFVGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGIAEALLATA 182
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
+GL +IP+ + YN F F + A + + SR + S
Sbjct: 183 IGLVAAIPAVVIYNVFARQIGGFKAMLGDVAAQVLLLQSRDLDLEAS 229
>gi|260599390|ref|YP_003211961.1| biopolymer transport protein ExbB [Cronobacter turicensis z3032]
gi|260218567|emb|CBA33808.1| Biopolymer transport protein exbB [Cronobacter turicensis z3032]
Length = 239
Score = 209 bits (532), Expect = 3e-52, Method: Composition-based stats.
Identities = 50/224 (22%), Positives = 102/224 (45%), Gaps = 4/224 (1%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
D+S++ ++ + VK ++ L + S+++W++ KSV +R+ + +Q ++
Sbjct: 3 TDLSVWGMYQHADIVVKIVMIGLILASVVTWAIFFSKSVELSGHKRRLKREQQELAGART 62
Query: 69 LETVCKSLKNHHNIGL-AAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
L+ + + L A + A +E + G GI++R ++ +A
Sbjct: 63 LDDAREMAERFGPKSLSARLIEEAQNE--RELSAGCEDNEGIKERTGFRLERRVAAAGRH 120
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
+ +L ++ + VG+ G V G+M F IA + N+ V PGI E+L++ +GL
Sbjct: 121 MGRGNGYLATIGAISPFVGLFGTVWGIMNSFIGIAQSQTTNLAVVAPGIAEALLATAIGL 180
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
+IP+ + YN F + + A + + SR + S
Sbjct: 181 IAAIPAVVIYNIFARTIGGYKATLGDVAAQVLLLQSRDLDLEAS 224
>gi|294341041|emb|CAZ89436.1| Protein tolQ [Thiomonas sp. 3As]
Length = 250
Score = 208 bits (531), Expect = 3e-52, Method: Composition-based stats.
Identities = 73/220 (33%), Positives = 113/220 (51%), Gaps = 3/220 (1%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
+ SI ++ + + V+ ++ LL S+ SW+VI +K + R + +FEQ FWSG
Sbjct: 3 QNFSIVSMVLGASIVVQLVLALLLSVSLASWTVIFRKYFAIKSARVKSEDFEQEFWSGTG 62
Query: 69 LETVCKSL--KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
L + +S H L IF S M E+ K ++ + D R M A RE++
Sbjct: 63 LNDLYQSALSNGRHGSPLQRIFASGMREYLKLRERHVLDGSTLVDGARRAMRAAFQREMD 122
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLG 185
+ LSFL S+ S VG+ G V G+M F ++ + ++ PGI E+L++ +G
Sbjct: 123 ALEANLSFLASVGSVSPYVGLFGTVWGIMHAFVGLSNLQQVTLATVAPGIAEALVATAIG 182
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
L +IP+ IAYN F D + A + E F EFS IL RQ+
Sbjct: 183 LFAAIPAVIAYNFFARDIDRLANRYESFTEEFSNILQRQS 222
>gi|329888412|ref|ZP_08267010.1| protein TolQ [Brevundimonas diminuta ATCC 11568]
gi|328846968|gb|EGF96530.1| protein TolQ [Brevundimonas diminuta ATCC 11568]
Length = 262
Score = 208 bits (531), Expect = 3e-52, Method: Composition-based stats.
Identities = 68/219 (31%), Positives = 118/219 (53%), Gaps = 4/219 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
++ LFM VK ++ L S+ SW++II K+V F + + EFE+ SG+SLE
Sbjct: 10 LNPIELFMTADWVVKTVMIGLAAASVWSWTIIIDKAVRFSRMNARATEFEKQVESGRSLE 69
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIG---IQDRIDRMMDVAIARELEE 127
V L + + + +W+++ +GA + + RIDR +D IARE ++
Sbjct: 70 EVAAQAGPQPVDPLPRMLVLTLQDWREARARGAMTDTQGNMLIARIDRALDSVIARESQK 129
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
I L L +++A +G+ G V G+M F SIA + N+ ++ P I E+L + +GL
Sbjct: 130 IENGLGVLSVVATASPFIGLFGTVWGIMNAFDSIAAAGNTNLTTVAPAIAEALFATAIGL 189
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ IA+N F + KF ++E FA++ + ++R+
Sbjct: 190 AAAIPAYIAFNAFSVSAGKFTGRLEAFADDLQSAIARRL 228
>gi|145868|gb|AAA23732.1| exbB peptide [Escherichia coli]
Length = 244
Score = 208 bits (531), Expect = 3e-52, Method: Composition-based stats.
Identities = 57/227 (25%), Positives = 110/227 (48%), Gaps = 4/227 (1%)
Query: 6 LAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS 65
L D+S++ ++ + VKC++ L + S+++W++ KSV F L+R+ + +QL
Sbjct: 5 LMQTDLSVWGMYQHADIVVKCVMIGLILASVVTWAIFFSKSVEFFNLKRRLKREQQLLAE 64
Query: 66 GQSLETVCKSLKNHHNIGLA-AIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARE 124
+SL + + L+ + A +E + S +G+ GI++R ++ +A
Sbjct: 65 ARSLNQANDIAADFGSKSLSLHLLNEAQNELELS--EGSDDNEGIKERTSFRLERRVAAV 122
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISIL 183
++ +L ++ + VG+ G V G+M F IA + N+ V PGI E+L++
Sbjct: 123 GRQMGRGNGYLATIGAISPFVGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGIAEALLATA 182
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
+GL +IP+ + YN F F + A + + SR + S
Sbjct: 183 IGLVAAIPAVVIYNVFARQIGGFKAMLGDVAAQVLLLQSRDLDLEAS 229
>gi|259909764|ref|YP_002650120.1| biopolymer transport protein ExbB [Erwinia pyrifoliae Ep1/96]
gi|224965386|emb|CAX56918.1| Biopolymer transport protein [Erwinia pyrifoliae Ep1/96]
Length = 244
Score = 208 bits (531), Expect = 3e-52, Method: Composition-based stats.
Identities = 52/222 (23%), Positives = 104/222 (46%), Gaps = 2/222 (0%)
Query: 6 LAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS 65
L MD+S++ ++ + VK ++ L + S+ +W++ KS+ + R++ + + L
Sbjct: 5 LMQMDLSVWGMYQHADIVVKAVMIGLLLASVATWAIFFSKSIELRSARKRLKREQLLLAD 64
Query: 66 GQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
+SL+ + + + L+ I + +E + G+ GI++R ++ +A
Sbjct: 65 ARSLDEASQIGGDFQSQSLS-ILLIKEAENELELSAGSDDNNGIKERTAFRLERRVAAIG 123
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILL 184
FL ++ S VG+ G V G+M F IA + N+ V PGI E+L++ +
Sbjct: 124 RHPGRGNGFLATIGSIAPFVGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGIAEALLATAI 183
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
GL +IP+ + YN F + + A + + SR +
Sbjct: 184 GLVAAIPAVVIYNVFARAIGSYKASLGDVAAQVLLLQSRDLD 225
>gi|332974346|gb|EGK11276.1| TolQ colicin import protein [Psychrobacter sp. 1501(2011)]
Length = 246
Score = 208 bits (531), Expect = 4e-52, Method: Composition-based stats.
Identities = 63/222 (28%), Positives = 113/222 (50%), Gaps = 3/222 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
I++ +L L V+ ++ +L + S+L W +I + S T +RQ + FE FWSG+ L
Sbjct: 8 INLISLVTNASLLVQVVMGILLLASVLCWVLIFRLSARLGTAKRQDQHFENWFWSGEDLA 67
Query: 71 TVCKSLKNHHN-IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+ + ++N + GLA IF SE+ + K + I D ++R + V + R+ + +
Sbjct: 68 KMYQGIQNSPDRHGLANIFYVGFSEFLRMNKKR-QPKDHIIDGVERKLRVGLGRQQQSLE 126
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCV 188
L+ L S+ S +G+ G V G+M F ++ ++ PGI E+LI+ +GL
Sbjct: 127 SGLAVLASIGSVSPYIGLFGTVWGIMNAFIGLSEASQVSLSAVAPGIAEALIATAMGLFA 186
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
+IP+ +AYN F + F +E + +L R+T +
Sbjct: 187 AIPAVLAYNHFTAKAAGIYDSRALFCDEMTGMLQRETHETAT 228
>gi|331654615|ref|ZP_08355615.1| TonB-system energizer ExbB [Escherichia coli M718]
gi|331047997|gb|EGI20074.1| TonB-system energizer ExbB [Escherichia coli M718]
Length = 244
Score = 208 bits (531), Expect = 4e-52, Method: Composition-based stats.
Identities = 57/227 (25%), Positives = 109/227 (48%), Gaps = 4/227 (1%)
Query: 6 LAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS 65
L D+S++ ++ + VKC++ L + S+++W++ KSV F +R+ + +QL
Sbjct: 5 LMQTDLSVWGMYQHADIVVKCVMIGLILASVVTWAIFFSKSVEFFNQKRRLKREQQLLAE 64
Query: 66 GQSLETVCKSLKNHHNIGLA-AIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARE 124
+SL + + L+ + A SE + S +G+ GI++R ++ +A
Sbjct: 65 ARSLNQANDIAADFGSKSLSLHLLNEAQSELELS--EGSDDNEGIKERTSFRLERRVAAV 122
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISIL 183
++ +L ++ + VG+ G V G+M F IA + N+ V PGI E+L++
Sbjct: 123 GRQMGRGNGYLATIGAISPFVGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGIAEALLATA 182
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
+GL +IP+ + YN F F + A + + SR + S
Sbjct: 183 IGLVAAIPAVVIYNVFARQIGGFKAMLGDVAAQVLLLQSRDLDLEAS 229
>gi|283787142|ref|YP_003367007.1| biopolymer transport protein [Citrobacter rodentium ICC168]
gi|282950596|emb|CBG90266.1| biopolymer transport protein [Citrobacter rodentium ICC168]
Length = 244
Score = 208 bits (531), Expect = 4e-52, Method: Composition-based stats.
Identities = 55/227 (24%), Positives = 108/227 (47%), Gaps = 4/227 (1%)
Query: 6 LAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS 65
L D+S++ ++ + VKC++ L + S+++W++ KSV+F + RR+ + +Q
Sbjct: 5 LMQTDLSVWGMYQHADIVVKCVMIGLILASVVTWAIFFSKSVDFFSQRRRLKREQQQLAE 64
Query: 66 GQSLETVCKSLKNHHNIGL-AAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARE 124
+SL+ + L + A +E + S G+ GI++R ++ +A
Sbjct: 65 ARSLDQASDIAASFGAKSLNTQLLNEAQNELELSA--GSEDNEGIKERTGFRLERRVAAA 122
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISIL 183
++ +L ++ + VG+ G V G+M F IA + N+ V PGI E+L++
Sbjct: 123 GRQMGRGNGYLATIGAISPFVGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGIAEALLATA 182
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
+GL +IP+ + YN F + A + + SR + + S
Sbjct: 183 IGLVAAIPAVVIYNIFARQIGGLKATLSDIAAQVLLLQSRDLDLDAS 229
>gi|26249572|ref|NP_755612.1| biopolymer transport protein ExbB [Escherichia coli CFT073]
gi|306816653|ref|ZP_07450785.1| biopolymer transport protein ExbB [Escherichia coli NC101]
gi|26109980|gb|AAN82185.1|AE016766_273 Biopolymer transport exbB protein [Escherichia coli CFT073]
gi|305850218|gb|EFM50677.1| biopolymer transport protein ExbB [Escherichia coli NC101]
Length = 244
Score = 208 bits (531), Expect = 4e-52, Method: Composition-based stats.
Identities = 56/227 (24%), Positives = 109/227 (48%), Gaps = 4/227 (1%)
Query: 6 LAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS 65
L D+S++ ++ + VKC++ L + S+++W++ KSV F +R+ + +QL
Sbjct: 5 LMQTDLSVWGMYQHADIVVKCVMIGLILASVVTWAIFFSKSVEFFNQKRRLKREQQLLAE 64
Query: 66 GQSLETVCKSLKNHHNIGLAA-IFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARE 124
+SL + + L+ + A +E + S +G+ GI++R ++ +A
Sbjct: 65 ARSLNQANDIAADFGSKSLSLYLLNEAQNELELS--EGSDDNEGIKERTSFRLERRVAAV 122
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISIL 183
++ +L ++ + VG+ G V G+M F IA + N+ V PGI E+L++
Sbjct: 123 GRQMGRGNGYLATIGAISPFVGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGIAEALLATA 182
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
+GL +IP+ + YN F F + A + + SR + S
Sbjct: 183 IGLVAAIPAVVIYNVFARQIGGFKAMLGDVAAQVLLLQSRDLDLEAS 229
>gi|186476701|ref|YP_001858171.1| MotA/TolQ/ExbB proton channel [Burkholderia phymatum STM815]
gi|184193160|gb|ACC71125.1| MotA/TolQ/ExbB proton channel [Burkholderia phymatum STM815]
Length = 243
Score = 208 bits (531), Expect = 4e-52, Method: Composition-based stats.
Identities = 58/228 (25%), Positives = 99/228 (43%), Gaps = 14/228 (6%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
M NYG+A ++ Q + I L I S+LSWSVI+ KS N + L R R E
Sbjct: 1 MQNYGIA-------HVWAQGDFVTRGIALALLIMSVLSWSVIVVKSWNVMRLNRLTRNAE 53
Query: 61 QLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRID------ 114
+ FW K L + + F++ +++ D ++ + DR+D
Sbjct: 54 KAFWHSDDFADGAKKLGSDTSSPTENPFLALALSGQEAADHHHQTQPHLHDRMDVSDWVT 113
Query: 115 RMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG 174
R + + + + L+ L S+ S VG+ G V G+ +I +++ + G
Sbjct: 114 RCLKDTMDESVARMQAGLAILASIGSTAPFVGLFGTVWGIYHALLTIGATGQSSIDQVAG 173
Query: 175 -IIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+ E+LI GL V+IP+ + YN +K ++ FA+ A
Sbjct: 174 PVGEALIMTAFGLFVAIPAVLGYNALTRANKGIVSKLNRFAHGLHAFF 221
>gi|301643625|ref|ZP_07243666.1| TonB-system energizer ExbB [Escherichia coli MS 146-1]
gi|301078009|gb|EFK92815.1| TonB-system energizer ExbB [Escherichia coli MS 146-1]
Length = 239
Score = 208 bits (531), Expect = 4e-52, Method: Composition-based stats.
Identities = 55/224 (24%), Positives = 108/224 (48%), Gaps = 4/224 (1%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
D+S++ ++ + VKC++ L + S+++W++ KSV F +R+ + +QL +S
Sbjct: 3 TDLSVWGMYQHADIVVKCVMIGLILASVVTWAIFFSKSVEFFNQKRRLKREQQLLAEARS 62
Query: 69 LETVCKSLKNHHNIGLA-AIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
L + + L+ + A +E + S +G+ GI++R ++ +A +
Sbjct: 63 LNQANDIAADFGSKSLSLHLLNEAQNELELS--EGSDDNEGIKERTSFRLERRVAAVGRQ 120
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
+ +L ++ + VG+ G V G+M F IA + N+ V PGI E+L++ +GL
Sbjct: 121 MGRGNGYLATIGAISPFVGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGIAEALLATAIGL 180
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
+IP+ + YN F F + A + + SR + S
Sbjct: 181 VAAIPAVVIYNVFARQIGGFKAMLGDVAAQVLLLQSRDLDLEAS 224
>gi|326624910|gb|EGE31255.1| biopolymer transport protein ExbB [Salmonella enterica subsp.
enterica serovar Dublin str. 3246]
Length = 239
Score = 208 bits (531), Expect = 4e-52, Method: Composition-based stats.
Identities = 55/224 (24%), Positives = 106/224 (47%), Gaps = 4/224 (1%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
D+S++ ++ + VKC++ L + S+++W++ KSV F T +R+ + + +S
Sbjct: 3 TDLSVWGMYQHADIVVKCVMIGLILASVVTWAIFFSKSVEFFTQKRRLKREQLQLADARS 62
Query: 69 LETVCKSLKNHHNIGL-AAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
L+ L A + A +E + S +G+ GI++R ++ +A
Sbjct: 63 LDQASDIAAGFSAKSLSAQLINEAQNELELS--QGSEDNEGIKERTGFRLERRVAAVGRY 120
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
+ +L ++ + VG+ G V G+M F IA + N+ V PGI E+L++ +GL
Sbjct: 121 MGRGNGYLATIGAISPFVGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGIAEALLATAIGL 180
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
+IP+ + YN F + + A + + SR + N S
Sbjct: 181 VAAIPAVVIYNIFARQIGSYKATLGDVAAQVLLLQSRDLDLNAS 224
>gi|226942654|ref|YP_002797727.1| TolQ-like protein [Azotobacter vinelandii DJ]
gi|226717581|gb|ACO76752.1| TolQ-like protein [Azotobacter vinelandii DJ]
Length = 234
Score = 208 bits (530), Expect = 4e-52, Method: Composition-based stats.
Identities = 57/223 (25%), Positives = 109/223 (48%), Gaps = 2/223 (0%)
Query: 7 AIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG 66
AI +S++ L + VK ++ L + S+ SW +I+++S+ R R+F + F
Sbjct: 4 AIEPMSVWGLIEEASPLVKLVMLTLVLASLASWYLIVRRSLLLGASERLCRDFLRRFRGS 63
Query: 67 QSLETVCKSLKNHH-NIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
L + + + GL +F + E+++ + +P + + ++R + VAI+ E
Sbjct: 64 AELAPLYREAAELPADAGLERLFRAGYGEFQQLGGEPGVAPEAVIEGVERSLLVAISEEE 123
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILL 184
E + + L+ L S+ S +G+ G V G+M F ++ + PGI E+LI+ +
Sbjct: 124 ERLGKGLALLASIGSVSPYIGLFGTVWGIMNSFIGLSQVRQATLSTVAPGIAEALIATAI 183
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEG 227
GL +IP+ +AYN+F + + F NE L R+ +
Sbjct: 184 GLFAAIPAVLAYNRFSARVASLSSRYYAFGNELQGRLHRRLQA 226
>gi|299769118|ref|YP_003731144.1| protein TolQ [Acinetobacter sp. DR1]
gi|298699206|gb|ADI89771.1| protein TolQ [Acinetobacter sp. DR1]
Length = 232
Score = 208 bits (530), Expect = 5e-52, Method: Composition-based stats.
Identities = 63/220 (28%), Positives = 113/220 (51%), Gaps = 3/220 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+ I L +Q V+ ++ +L + SI SW +I + +++ ++ F+++FWSG L
Sbjct: 9 LHISDLILQASPVVQLVMLILLLASIFSWYLIAKLHMSYKKAHQEDEHFQKMFWSGAELN 68
Query: 71 TVCKSLK-NHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
T+ + + N GL IF +SE+ K + A I + +R++ V ++R+ +
Sbjct: 69 TLYNNAQLNSKRSGLEDIFYQGLSEFFKLKKRQAPVSQTI-EGTERILRVGLSRDQSHLE 127
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCV 188
L L S+ S +G+ G V G+M F +A + ++ PGI E+LI+ +GL
Sbjct: 128 YGLGTLASIGSVAPYIGLFGTVWGIMNAFIGLAAVDQVTLATVAPGIAEALIATAIGLFA 187
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
+IP+ +A+N F S+ FA E A+L RQ+ G+
Sbjct: 188 AIPAVLAFNHFTSKSESVYSDRALFAEEMIALLQRQSVGS 227
>gi|149185614|ref|ZP_01863930.1| TolQ, tolQ protein [Erythrobacter sp. SD-21]
gi|148830834|gb|EDL49269.1| TolQ, tolQ protein [Erythrobacter sp. SD-21]
Length = 232
Score = 208 bits (530), Expect = 5e-52, Method: Composition-based stats.
Identities = 67/231 (29%), Positives = 119/231 (51%), Gaps = 6/231 (2%)
Query: 1 MNNYGL----AIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQF 56
MN+ L A + LF+ + V+ ++ L + SI W++I+ S+ L+
Sbjct: 1 MNHLSLIAVGAPTRLDPVQLFLDADIVVQAVMAGLILASIWVWAIIVSFSLRMNKLKSVQ 60
Query: 57 REFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRM 116
R +E FW + + + +I A + + ++EW++S R ++ RI
Sbjct: 61 RNYETEFWQADQFDRFMAE-RGNRDIPSARVAQAGVAEWRRSTKGEVRDREALRGRIATA 119
Query: 117 MDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGI 175
MD IA+E +++ E+L+FL ++ + VG+ G V G+M F I S+++ V PGI
Sbjct: 120 MDSQIAQEADDVAERLNFLATVGAVAPFVGLFGTVWGIMNSFFQIGAQESSSLAVVAPGI 179
Query: 176 IESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
E+L + +GL +IP+ IAYN+F ++F ++ FA++ A SRQ E
Sbjct: 180 SEALFATAIGLFAAIPAVIAYNRFSHTVERFESRLHRFADKLHASFSRQLE 230
>gi|56415100|ref|YP_152175.1| biopolymer transport protein ExbB [Salmonella enterica subsp.
enterica serovar Paratyphi A str. ATCC 9150]
gi|197364029|ref|YP_002143666.1| biopolymer transport protein ExbB [Salmonella enterica subsp.
enterica serovar Paratyphi A str. AKU_12601]
gi|56129357|gb|AAV78863.1| biopolymer transport ExbB protein [Salmonella enterica subsp.
enterica serovar Paratyphi A str. ATCC 9150]
gi|197095506|emb|CAR61070.1| biopolymer transport ExbB protein [Salmonella enterica subsp.
enterica serovar Paratyphi A str. AKU_12601]
Length = 244
Score = 208 bits (530), Expect = 5e-52, Method: Composition-based stats.
Identities = 56/227 (24%), Positives = 107/227 (47%), Gaps = 4/227 (1%)
Query: 6 LAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS 65
L D+S++ ++ + VKC++ L + S+++W++ KSV F T +R+ + +
Sbjct: 5 LMQTDLSVWGMYQHADIVVKCVMIGLILASVVTWAIFFSKSVEFFTQKRRLKREQLQLAD 64
Query: 66 GQSLETVCKSLKNHHNIGL-AAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARE 124
+SL+ L A + A +E + S +G+ GI++R ++ +A
Sbjct: 65 ARSLDQASDIAAGFSAKSLSAQLINEAQNELELS--QGSEDNEGIKERTGFRLERRVAAV 122
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISIL 183
+ +L ++ + VG+ G V G+M F IA + N+ V PGI E+L++
Sbjct: 123 GRYMGRGNGYLATIGAISPFVGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGIAEALLATA 182
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
+GL +IP+ + YN F + + A + + SR + N S
Sbjct: 183 IGLVAAIPAVVIYNIFACQIGSYKATLGDVAAQVLLLQSRDLDLNAS 229
>gi|149375114|ref|ZP_01892886.1| Biopolymer transport protein [Marinobacter algicola DG893]
gi|149360478|gb|EDM48930.1| Biopolymer transport protein [Marinobacter algicola DG893]
Length = 229
Score = 208 bits (530), Expect = 5e-52, Method: Composition-based stats.
Identities = 68/220 (30%), Positives = 119/220 (54%), Gaps = 4/220 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
++S++ L G+ V+ ++ LL + SI+SW++I Q+ F ++ FE+ FWSG L
Sbjct: 4 EVSVWYLIANAGVLVQLVMLLLALASIISWALIFQRLKVFRKAKQAQYAFEERFWSGMDL 63
Query: 70 ETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + + ++ G+ ++F + E+ + + +R + + R M VA +RE E
Sbjct: 64 GQLYREVNSNPTPFSGMESLFRAGFKEFSRLRQQ-SRDADAVMEGTQRAMRVAFSREQER 122
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ L FL ++ S VG+ G V G+M F+ +A + ++ PGI E+LI+ +GL
Sbjct: 123 LEMHLPFLATVGSTSPYVGLFGTVWGIMNSFRGLAQVQQATLATVAPGISEALIATAMGL 182
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ IAYN+F S E FA+EFS+IL R+
Sbjct: 183 FAAIPAVIAYNRFSAISDALLKNYETFADEFSSILHRRVH 222
>gi|296162470|ref|ZP_06845261.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. Ch1-1]
gi|295887283|gb|EFG67110.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. Ch1-1]
Length = 243
Score = 208 bits (530), Expect = 5e-52, Method: Composition-based stats.
Identities = 57/228 (25%), Positives = 99/228 (43%), Gaps = 14/228 (6%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
M NYGLA ++ Q + I L I S++SW+VI+ K N + L+R + E
Sbjct: 1 MQNYGLA-------HVWAQGDFVTRGIALTLLIMSVMSWTVIVIKGWNVMRLKRLTKNAE 53
Query: 61 QLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRID------ 114
Q FW L K L + F++ +++ D ++ + DR+D
Sbjct: 54 QAFWHSDDLADGVKKLGAGSSTPQDNPFLALALSGQEAADHHHQTQPHLHDRMDVSDWVT 113
Query: 115 RMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG 174
R + + + + L+ L S+ S VG+ G V G+ +I +++ + G
Sbjct: 114 RCLKDTMDESVARMQSGLAILASIGSTAPFVGLFGTVWGIYHALLAIGASGQSSIDQVAG 173
Query: 175 -IIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+ E+LI GL V+IP+ + YN +K ++ FA+ A
Sbjct: 174 PVGEALIMTAFGLFVAIPAVLGYNALTRANKAVVAKLSRFAHGLHAFF 221
>gi|301325646|ref|ZP_07219110.1| TonB-system energizer ExbB [Escherichia coli MS 78-1]
gi|300847564|gb|EFK75324.1| TonB-system energizer ExbB [Escherichia coli MS 78-1]
gi|323966535|gb|EGB61968.1| tonB-system energizer ExbB [Escherichia coli M863]
gi|327251789|gb|EGE63475.1| tonB-system energizer ExbB [Escherichia coli STEC_7v]
Length = 239
Score = 208 bits (530), Expect = 5e-52, Method: Composition-based stats.
Identities = 55/224 (24%), Positives = 107/224 (47%), Gaps = 4/224 (1%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
D+S++ ++ + VKC++ L + S+++W++ KSV F +R+ + +QL +S
Sbjct: 3 TDLSVWGMYQHADIVVKCVMIGLILASVVTWAIFFSKSVEFFNQKRRLKREQQLLAQARS 62
Query: 69 LETVCKSLKNHHNIGLA-AIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
L + + L+ + A E + S +G+ GI++R ++ +A +
Sbjct: 63 LNQANDIAADFGSKSLSLHLLNEAQDELELS--EGSDDNEGIKERTSFRLERRVAAVGRQ 120
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
+ +L ++ + VG+ G V G+M F IA + N+ V PGI E+L++ +GL
Sbjct: 121 MGRGNGYLATIGAISPFVGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGIAEALLATAIGL 180
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
+IP+ + YN F F + A + + SR + S
Sbjct: 181 VAAIPAVVIYNVFARQIGGFKAMLGDVAAQVLLLQSRDLDLEAS 224
>gi|310766368|gb|ADP11318.1| biopolymer transport protein ExbB [Erwinia sp. Ejp617]
Length = 244
Score = 208 bits (530), Expect = 5e-52, Method: Composition-based stats.
Identities = 52/222 (23%), Positives = 104/222 (46%), Gaps = 2/222 (0%)
Query: 6 LAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS 65
L MD+S++ ++ + VK ++ L + S+ +W++ KS+ + R++ + + L
Sbjct: 5 LMQMDLSVWGMYQHADIVVKAVMIGLLLASVATWAIFFSKSIELRSARKRLKREQLLLAD 64
Query: 66 GQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
+SL+ + + + L+ I + +E + G+ GI++R ++ +A
Sbjct: 65 ARSLDEASQIGGDFQSQSLS-ILLIKEAENELELSAGSDDNNGIKERTAFRLERRVAAIG 123
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILL 184
FL ++ S VG+ G V G+M F IA + N+ V PGI E+L++ +
Sbjct: 124 RHAGRGNGFLATIGSIAPFVGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGIAEALLATAI 183
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
GL +IP+ + YN F + + A + + SR +
Sbjct: 184 GLVAAIPAVVIYNVFARAIGSYKASLGDVAAQVLLLQSRDLD 225
>gi|170766052|ref|ZP_02900863.1| TonB-system energizer ExbB [Escherichia albertii TW07627]
gi|170125198|gb|EDS94129.1| TonB-system energizer ExbB [Escherichia albertii TW07627]
Length = 244
Score = 208 bits (530), Expect = 5e-52, Method: Composition-based stats.
Identities = 55/227 (24%), Positives = 109/227 (48%), Gaps = 4/227 (1%)
Query: 6 LAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS 65
L D+S++ ++ + VKC++ L + S+++W++ KSV F +R+ + +Q+
Sbjct: 5 LMQTDLSVWGMYQHADIVVKCVMIGLILASVVTWAIFFSKSVEFFNQKRRLKREQQMLAE 64
Query: 66 GQSLETVCKSLKNHHNIGLA-AIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARE 124
+SL + + L+ + A +E + S +G+ GI++R ++ +A
Sbjct: 65 ARSLNQANDIAADFGSKSLSLHLLNEAQNELELS--EGSDDNEGIKERTSFRLERRVAAV 122
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISIL 183
++ +L ++ + VG+ G V G+M F IA + N+ V PGI E+L++
Sbjct: 123 GRQMGRGNGYLATIGAISPFVGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGIAEALLATA 182
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
+GL +IP+ + YN F F + A + + SR + S
Sbjct: 183 IGLVAAIPAVVIYNVFARQIGGFKAMLGDVAAQVLLLQSRDLDLEAS 229
>gi|169632717|ref|YP_001706453.1| tolerance to group A colicins, single-stranded DNA filamentous
phage, required for OM integrity [Acinetobacter
baumannii SDF]
gi|169795061|ref|YP_001712854.1| tolerance to group A colicins, single-stranded DNA filamentous
phage, required for OM integrity [Acinetobacter
baumannii AYE]
gi|213158277|ref|YP_002320328.1| protein TolQ [Acinetobacter baumannii AB0057]
gi|215482610|ref|YP_002324802.1| protein TolQ [Acinetobacter baumannii AB307-0294]
gi|239501029|ref|ZP_04660339.1| protein TolQ [Acinetobacter baumannii AB900]
gi|260556545|ref|ZP_05828763.1| TolQ [Acinetobacter baumannii ATCC 19606]
gi|301344813|ref|ZP_07225554.1| protein TolQ [Acinetobacter baumannii AB056]
gi|301510232|ref|ZP_07235469.1| protein TolQ [Acinetobacter baumannii AB058]
gi|301595125|ref|ZP_07240133.1| protein TolQ [Acinetobacter baumannii AB059]
gi|332851091|ref|ZP_08433200.1| protein TolQ [Acinetobacter baumannii 6013150]
gi|332869660|ref|ZP_08438848.1| protein TolQ [Acinetobacter baumannii 6013113]
gi|332875981|ref|ZP_08443767.1| protein TolQ [Acinetobacter baumannii 6014059]
gi|169147988|emb|CAM85851.1| tolerance to group A colicins, single-stranded DNA filamentous
phage, required for OM integrity [Acinetobacter
baumannii AYE]
gi|169151509|emb|CAP00272.1| tolerance to group A colicins, single-stranded DNA filamentous
phage, required for OM integrity [Acinetobacter
baumannii]
gi|193078073|gb|ABO13008.2| tolerance to group A colicins single-stranded DNA filamentous phage
[Acinetobacter baumannii ATCC 17978]
gi|213057437|gb|ACJ42339.1| protein TolQ [Acinetobacter baumannii AB0057]
gi|213987830|gb|ACJ58129.1| protein TolQ [Acinetobacter baumannii AB307-0294]
gi|260409804|gb|EEX03104.1| TolQ [Acinetobacter baumannii ATCC 19606]
gi|322509066|gb|ADX04520.1| tolQ [Acinetobacter baumannii 1656-2]
gi|323519047|gb|ADX93428.1| group A colicins tolerance protein [Acinetobacter baumannii
TCDC-AB0715]
gi|332730255|gb|EGJ61580.1| protein TolQ [Acinetobacter baumannii 6013150]
gi|332732562|gb|EGJ63795.1| protein TolQ [Acinetobacter baumannii 6013113]
gi|332735847|gb|EGJ66888.1| protein TolQ [Acinetobacter baumannii 6014059]
Length = 232
Score = 208 bits (530), Expect = 5e-52, Method: Composition-based stats.
Identities = 64/220 (29%), Positives = 114/220 (51%), Gaps = 3/220 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+ I L +Q V+ ++ +L + SI SW +I + +++ R+ F+++FWSG L
Sbjct: 9 LHISDLILQASPVVQLVMLILLLASIFSWYLIAKLHMSYKKARQDDEHFQKMFWSGAELN 68
Query: 71 TVCKSLK-NHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
T+ + + N GL IF +SE+ K + A + I + +R++ V ++R+ +
Sbjct: 69 TLYNNAQLNSKRSGLEDIFYQGLSEFFKLKKRQAPTSQMI-EGTERILRVGLSRDQGSLE 127
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCV 188
L L S+ S +G+ G V G+M F +A + ++ PGI E+LI+ +GL
Sbjct: 128 YGLGTLASIGSVAPYIGLFGTVWGIMNAFIGLAAVDQVTLATVAPGIAEALIATAIGLFA 187
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
+IP+ +A+N F S+ FA E A+L RQ+ G+
Sbjct: 188 AIPAVLAFNHFTAKSESVYSDRALFAEEMIALLQRQSVGS 227
>gi|311694929|gb|ADP97802.1| MotA/TolQ/ExbB proton channel [marine bacterium HP15]
Length = 229
Score = 208 bits (530), Expect = 6e-52, Method: Composition-based stats.
Identities = 69/220 (31%), Positives = 117/220 (53%), Gaps = 4/220 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
++S++ L G+ V+ ++ LL + SI+SW++I Q+ F +R FE+ FWSG L
Sbjct: 4 ELSVWYLIANAGVLVQLVMLLLALASIMSWALIFQRLQVFRKAKRAQLAFEERFWSGMDL 63
Query: 70 ETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + + G+ ++F + E+ + + +R + + R M VA +RE E
Sbjct: 64 GQLYREVNADPTPFSGMESLFRAGFKEFSRLRQQ-SRDADAVMEGTQRAMRVAFSREHER 122
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ L FL ++ S VG+ G V G+M F+ +A + ++ PGI E+LI+ +GL
Sbjct: 123 LEASLPFLATVGSTSPYVGLFGTVWGIMNSFRGLAQVQQATLATVAPGISEALIATAMGL 182
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ IAYN+F S E FA+EFS+IL R+
Sbjct: 183 FAAIPAVIAYNRFSAMSDALLKNYETFADEFSSILHRRVH 222
>gi|291086577|ref|ZP_06356197.2| TonB-system energizer ExbB [Citrobacter youngae ATCC 29220]
gi|291067834|gb|EFE05943.1| TonB-system energizer ExbB [Citrobacter youngae ATCC 29220]
Length = 239
Score = 208 bits (530), Expect = 6e-52, Method: Composition-based stats.
Identities = 57/224 (25%), Positives = 108/224 (48%), Gaps = 4/224 (1%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
D+S++ ++ + VKC++ L + S+++W++ KS+ F T +R+ + QL +S
Sbjct: 3 TDLSVWGMYQHADIVVKCVMIGLILASVVTWAIFFSKSLEFFTQKRRLKRELQLLADARS 62
Query: 69 LETVCKSLKNHHNIGL-AAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
LE + L A + A +E + S +G+ GI++R ++ +A
Sbjct: 63 LEGASEIAAGFDAKSLGAQLINEAQNELELS--EGSDDNEGIKERTGFRLERRVAAVGRH 120
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
+ +L ++ + VG+ G V G+M F IA + N+ V PGI E+L++ +GL
Sbjct: 121 MGRGNGYLATIGAISPFVGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGIAEALLATAIGL 180
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
+IP+ + YN F + + A + + SR + N S
Sbjct: 181 VAAIPAVVIYNVFARQIGSYKAMLGDVAAQVLLLQSRDLDLNAS 224
>gi|301017299|ref|ZP_07182063.1| TonB-system energizer ExbB [Escherichia coli MS 69-1]
gi|300400272|gb|EFJ83810.1| TonB-system energizer ExbB [Escherichia coli MS 69-1]
Length = 239
Score = 208 bits (529), Expect = 6e-52, Method: Composition-based stats.
Identities = 56/224 (25%), Positives = 109/224 (48%), Gaps = 4/224 (1%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
D+S++ ++ + VKC++ L + S+++W++ KSV F T +R+ + +QL +S
Sbjct: 3 TDLSVWGMYQHADIVVKCVMIGLILASVVTWAIFFSKSVEFFTQKRRLKREQQLLAEARS 62
Query: 69 LETVCKSLKNHHNIGLA-AIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
L + + L+ + A +E + S +G+ GI++R ++ +A +
Sbjct: 63 LNQANDIAADFGSKSLSLHLLNEAQNELELS--EGSDDNEGIKERTSFRLERRVAAVGRQ 120
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
+ +L ++ + VG+ G V G+M F IA + N+ V PGI E+L++ +GL
Sbjct: 121 MGRGNGYLATIGAISPFVGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGIAEALLATAIGL 180
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
+IP+ + YN F F + A + + SR + S
Sbjct: 181 VAAIPAVVIYNVFARQIGGFKAMLGDVAAQVLLLQSRDLDLEAS 224
>gi|312970816|ref|ZP_07784995.1| protein TolQ [Escherichia coli 1827-70]
gi|310336577|gb|EFQ01744.1| protein TolQ [Escherichia coli 1827-70]
gi|313649620|gb|EFS14044.1| protein TolQ [Shigella flexneri 2a str. 2457T]
gi|315614613|gb|EFU95255.1| protein TolQ [Escherichia coli 3431]
gi|320172960|gb|EFW48188.1| MotA/TolQ/ExbB proton channel family protein [Shigella dysenteriae
CDC 74-1112]
gi|320179422|gb|EFW54379.1| MotA/TolQ/ExbB proton channel family protein [Shigella boydii ATCC
9905]
gi|320183979|gb|EFW58803.1| MotA/TolQ/ExbB proton channel family protein [Shigella flexneri CDC
796-83]
gi|320198143|gb|EFW72747.1| MotA/TolQ/ExbB proton channel family protein [Escherichia coli
EC4100B]
gi|323158789|gb|EFZ44802.1| protein TolQ [Escherichia coli E128010]
gi|323180023|gb|EFZ65579.1| protein TolQ [Escherichia coli 1180]
gi|323185102|gb|EFZ70468.1| protein TolQ [Escherichia coli 1357]
gi|323191082|gb|EFZ76347.1| protein TolQ [Escherichia coli RN587/1]
gi|332093798|gb|EGI98852.1| protein TolQ [Shigella boydii 5216-82]
gi|332760895|gb|EGJ91183.1| protein TolQ [Shigella flexneri 4343-70]
gi|332761220|gb|EGJ91506.1| protein TolQ [Shigella flexneri 2747-71]
gi|333007852|gb|EGK27328.1| protein TolQ [Shigella flexneri K-218]
gi|333010144|gb|EGK29579.1| protein TolQ [Shigella flexneri K-272]
gi|333021416|gb|EGK40666.1| protein TolQ [Shigella flexneri K-304]
Length = 210
Score = 208 bits (529), Expect = 6e-52, Method: Composition-based stats.
Identities = 61/201 (30%), Positives = 103/201 (51%), Gaps = 3/201 (1%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHN--IGLA 85
+ +L FSI SW++IIQ++ R+ FE FWSG L + + + + G
Sbjct: 1 MLILIGFSIASWAIIIQRTRILNAAAREAEAFEDKFWSGIELSRLYQESQGKRDNLTGSE 60
Query: 86 AIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLV 145
IF S E+ + + +P + + R M +++ RELE + + FLG++ S +
Sbjct: 61 QIFYSGFKEFVRLHRANSHAPEAVVEGASRAMRISMNRELENLETHIPFLGTVGSISPYI 120
Query: 146 GILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSK 204
G+ G V G+M F ++ + + PGI E+LI+ +GL +IP+ +AYN+ +
Sbjct: 121 GLFGTVWGIMHAFIALGAVKQATLQMVAPGIAEALIATAIGLFAAIPAVMAYNRLNQRVN 180
Query: 205 KFAMQMEGFANEFSAILSRQT 225
K + + F EF+AIL RQ
Sbjct: 181 KLELNYDNFMEEFTAILHRQA 201
>gi|110643244|ref|YP_670974.1| biopolymer transport protein ExbB [Escherichia coli 536]
gi|110806907|ref|YP_690427.1| biopolymer transport protein ExbB [Shigella flexneri 5 str. 8401]
gi|300818770|ref|ZP_07098976.1| TonB-system energizer ExbB [Escherichia coli MS 107-1]
gi|300821591|ref|ZP_07101737.1| TonB-system energizer ExbB [Escherichia coli MS 119-7]
gi|300901385|ref|ZP_07119471.1| TonB-system energizer ExbB [Escherichia coli MS 198-1]
gi|300905865|ref|ZP_07123598.1| TonB-system energizer ExbB [Escherichia coli MS 84-1]
gi|300916885|ref|ZP_07133588.1| TonB-system energizer ExbB [Escherichia coli MS 115-1]
gi|300923665|ref|ZP_07139692.1| TonB-system energizer ExbB [Escherichia coli MS 182-1]
gi|300931892|ref|ZP_07147189.1| TonB-system energizer ExbB [Escherichia coli MS 187-1]
gi|300935666|ref|ZP_07150638.1| TonB-system energizer ExbB [Escherichia coli MS 21-1]
gi|300950785|ref|ZP_07164672.1| TonB-system energizer ExbB [Escherichia coli MS 116-1]
gi|300958391|ref|ZP_07170531.1| TonB-system energizer ExbB [Escherichia coli MS 175-1]
gi|300973363|ref|ZP_07172163.1| TonB-system energizer ExbB [Escherichia coli MS 45-1]
gi|300993145|ref|ZP_07180231.1| TonB-system energizer ExbB [Escherichia coli MS 200-1]
gi|301048179|ref|ZP_07195215.1| TonB-system energizer ExbB [Escherichia coli MS 185-1]
gi|301304190|ref|ZP_07210306.1| TonB-system energizer ExbB [Escherichia coli MS 124-1]
gi|309785160|ref|ZP_07679791.1| tonB-system energizer ExbB [Shigella dysenteriae 1617]
gi|309793571|ref|ZP_07687997.1| TonB-system energizer ExbB [Escherichia coli MS 145-7]
gi|312968660|ref|ZP_07782869.1| tonB-system energizer ExbB [Escherichia coli 2362-75]
gi|312972731|ref|ZP_07786904.1| tonB-system energizer ExbB [Escherichia coli 1827-70]
gi|331659287|ref|ZP_08360229.1| TonB-system energizer ExbB [Escherichia coli TA206]
gi|331684650|ref|ZP_08385242.1| TonB-system energizer ExbB [Escherichia coli H299]
gi|110344836|gb|ABG71073.1| biopolymer transport ExbB protein [Escherichia coli 536]
gi|110616455|gb|ABF05122.1| Biopolymer transport exbB protein [Shigella flexneri 5 str. 8401]
gi|300299937|gb|EFJ56322.1| TonB-system energizer ExbB [Escherichia coli MS 185-1]
gi|300305160|gb|EFJ59680.1| TonB-system energizer ExbB [Escherichia coli MS 200-1]
gi|300314900|gb|EFJ64684.1| TonB-system energizer ExbB [Escherichia coli MS 175-1]
gi|300355157|gb|EFJ71027.1| TonB-system energizer ExbB [Escherichia coli MS 198-1]
gi|300402334|gb|EFJ85872.1| TonB-system energizer ExbB [Escherichia coli MS 84-1]
gi|300410792|gb|EFJ94330.1| TonB-system energizer ExbB [Escherichia coli MS 45-1]
gi|300415855|gb|EFJ99165.1| TonB-system energizer ExbB [Escherichia coli MS 115-1]
gi|300420032|gb|EFK03343.1| TonB-system energizer ExbB [Escherichia coli MS 182-1]
gi|300449955|gb|EFK13575.1| TonB-system energizer ExbB [Escherichia coli MS 116-1]
gi|300459139|gb|EFK22632.1| TonB-system energizer ExbB [Escherichia coli MS 21-1]
gi|300460315|gb|EFK23808.1| TonB-system energizer ExbB [Escherichia coli MS 187-1]
gi|300525729|gb|EFK46798.1| TonB-system energizer ExbB [Escherichia coli MS 119-7]
gi|300528555|gb|EFK49617.1| TonB-system energizer ExbB [Escherichia coli MS 107-1]
gi|300840603|gb|EFK68363.1| TonB-system energizer ExbB [Escherichia coli MS 124-1]
gi|307555099|gb|ADN47874.1| TonB-dependent enterochelin uptake protein [Escherichia coli ABU
83972]
gi|308122528|gb|EFO59790.1| TonB-system energizer ExbB [Escherichia coli MS 145-7]
gi|308926280|gb|EFP71756.1| tonB-system energizer ExbB [Shigella dysenteriae 1617]
gi|310332673|gb|EFP99886.1| tonB-system energizer ExbB [Escherichia coli 1827-70]
gi|312286878|gb|EFR14789.1| tonB-system energizer ExbB [Escherichia coli 2362-75]
gi|315256907|gb|EFU36875.1| TonB-system energizer ExbB [Escherichia coli MS 85-1]
gi|315288761|gb|EFU48159.1| TonB-system energizer ExbB [Escherichia coli MS 110-3]
gi|315295040|gb|EFU54377.1| TonB-system energizer ExbB [Escherichia coli MS 153-1]
gi|315297741|gb|EFU57018.1| TonB-system energizer ExbB [Escherichia coli MS 16-3]
gi|315615009|gb|EFU95647.1| tonB-system energizer ExbB [Escherichia coli 3431]
gi|323154705|gb|EFZ40904.1| tonB-system energizer ExbB [Escherichia coli EPECa14]
gi|323163060|gb|EFZ48893.1| tonB-system energizer ExbB [Escherichia coli E128010]
gi|323168150|gb|EFZ53837.1| tonB-system energizer ExbB [Shigella sonnei 53G]
gi|323178714|gb|EFZ64290.1| tonB-system energizer ExbB [Escherichia coli 1180]
gi|323183595|gb|EFZ68992.1| tonB-system energizer ExbB [Escherichia coli 1357]
gi|323935990|gb|EGB32285.1| tonB-system energizer ExbB [Escherichia coli E1520]
gi|323941893|gb|EGB38072.1| tonB-system energizer ExbB [Escherichia coli E482]
gi|323946747|gb|EGB42767.1| tonB-system energizer ExbB [Escherichia coli H120]
gi|323951473|gb|EGB47348.1| tonB-system energizer ExbB [Escherichia coli H252]
gi|323957845|gb|EGB53559.1| tonB-system energizer ExbB [Escherichia coli H263]
gi|323960945|gb|EGB56564.1| tonB-system energizer ExbB [Escherichia coli H489]
gi|323971866|gb|EGB67091.1| tonB-system energizer ExbB [Escherichia coli TA007]
gi|323978920|gb|EGB74000.1| tonB-system energizer ExbB [Escherichia coli TW10509]
gi|324005413|gb|EGB74632.1| TonB-system energizer ExbB [Escherichia coli MS 57-2]
gi|324011898|gb|EGB81117.1| TonB-system energizer ExbB [Escherichia coli MS 60-1]
gi|324018149|gb|EGB87368.1| TonB-system energizer ExbB [Escherichia coli MS 117-3]
gi|324119620|gb|EGC13501.1| tonB-system energizer ExbB [Escherichia coli E1167]
gi|331053869|gb|EGI25898.1| TonB-system energizer ExbB [Escherichia coli TA206]
gi|331078265|gb|EGI49471.1| TonB-system energizer ExbB [Escherichia coli H299]
gi|332088502|gb|EGI93619.1| tonB-system energizer ExbB [Shigella dysenteriae 155-74]
gi|332998949|gb|EGK18540.1| tonB-system energizer ExbB [Shigella flexneri VA-6]
gi|332999759|gb|EGK19343.1| tonB-system energizer ExbB [Shigella flexneri K-272]
gi|333015625|gb|EGK34964.1| tonB-system energizer ExbB [Shigella flexneri K-227]
Length = 239
Score = 208 bits (529), Expect = 6e-52, Method: Composition-based stats.
Identities = 55/224 (24%), Positives = 108/224 (48%), Gaps = 4/224 (1%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
D+S++ ++ + VKC++ L + S+++W++ KSV F +R+ + +QL +S
Sbjct: 3 TDLSVWGMYQHADIVVKCVMIGLILASVVTWAIFFSKSVEFFNQKRRLKREQQLLAEARS 62
Query: 69 LETVCKSLKNHHNIGLA-AIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
L + + L+ + A +E + S +G+ GI++R ++ +A +
Sbjct: 63 LNQANDIAADFGSKSLSLHLLNEAQNELELS--EGSDDNEGIKERTSFRLERRVAAVGRQ 120
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
+ +L ++ + VG+ G V G+M F IA + N+ V PGI E+L++ +GL
Sbjct: 121 MGRGNGYLATIGAISPFVGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGIAEALLATAIGL 180
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
+IP+ + YN F F + A + + SR + S
Sbjct: 181 VAAIPAVVIYNVFARQIGGFKAMLGDVAAQVLLLQSRDLDLEAS 224
>gi|157162484|ref|YP_001459802.1| biopolymer transport protein ExbB [Escherichia coli HS]
gi|157068164|gb|ABV07419.1| TonB-system energizer ExbB [Escherichia coli HS]
Length = 244
Score = 208 bits (529), Expect = 7e-52, Method: Composition-based stats.
Identities = 56/227 (24%), Positives = 109/227 (48%), Gaps = 4/227 (1%)
Query: 6 LAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS 65
L D+S++ ++ + VKC++ L + S+++W++ KSV F +R+ + +QL
Sbjct: 5 LMQTDLSVWGMYQHADIVVKCVMIGLILASVVTWAIFFSKSVEFFNQKRRLKREQQLLAE 64
Query: 66 GQSLETVCKSLKNHHNIGLA-AIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARE 124
+SL + + L+ + A +E + S +G+ GI++R ++ +A
Sbjct: 65 ARSLNQANDIAADFGSKSLSLHLLNEAQNELELS--EGSDDNEGIKERTSFRLERRVAAV 122
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISIL 183
++ +L ++ + VG+ G V G+M F IA + N+ V PGI E+L++
Sbjct: 123 GRQMGRGNGYLATIGAISPFVGLFGTVWGIMNSFIGIAQTQTANLAVVAPGIAEALLATA 182
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
+GL +IP+ + YN F F + A + + SR + S
Sbjct: 183 IGLVAAIPAVVIYNVFARQIGGFKAMLGDVAAQVLLLQSRDLDLEAS 229
>gi|269468526|gb|EEZ80180.1| biopolymer transport protein TolQ [uncultured SUP05 cluster
bacterium]
Length = 222
Score = 207 bits (528), Expect = 8e-52, Method: Composition-based stats.
Identities = 59/217 (27%), Positives = 104/217 (47%), Gaps = 3/217 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+SIF+L + G V+ ++ +L + SI SW++I+ K + +R + F F + LE
Sbjct: 5 LSIFSLIISAGFVVQVVMFILVLMSIYSWTIILSKKKILMDAKRDIKTFHNNFLTDTDLE 64
Query: 71 TVCKSLKN--HHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ K + + IF S E+ ++ I +R R M+ E++ +
Sbjct: 65 KLHKKIPKVVSKRSPMEHIFGSGYGEFTHFSSSSNQALIMNSERAYRAMNTTANNEVDRL 124
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
LS L ++S+ +G+ G V G+M F +A + + PGI E+LI+ GL
Sbjct: 125 DGGLSVLAMIASSSPYIGLFGTVWGIMHSFIGLASVKQATIAIVAPGIAEALIATAFGLF 184
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+IP+++AYN+ + + A + F E IL RQ
Sbjct: 185 AAIPATMAYNRLVSQVEGIANKYTAFIEELFVILQRQ 221
>gi|330957280|gb|EGH57540.1| TonB system transport protein ExbB1 [Pseudomonas syringae pv.
maculicola str. ES4326]
Length = 287
Score = 207 bits (528), Expect = 8e-52, Method: Composition-based stats.
Identities = 55/226 (24%), Positives = 104/226 (46%), Gaps = 5/226 (2%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N+ G+A D+S + ++ + VK ++ L I S+++W++ I K + +R+ R
Sbjct: 47 NSLGMA-HDLSPWGMYQNADVVVKAVMIGLAIASVITWTIWISKGFELLGAKRRLRGEIV 105
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
+SL S + + A+ E + S +R GI++R+ ++ +
Sbjct: 106 NLKKARSLNEASASASKEGTLA-HLLVHDALEEMRLSA--NSREREGIKERVSFRLERLV 162
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLI 180
A ++ L ++ S VG+ G V G+M F IA + N+ V PGI E+L+
Sbjct: 163 AACGRNMSMGTGVLATIGSTAPFVGLFGTVWGIMNSFIGIAKTQTTNLAVVAPGIAEALL 222
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+ LGL +IP+ + YN F + Q+ + ++SR +
Sbjct: 223 ATALGLVAAIPAVVIYNVFARSIAGYKAQVSDASAHVLLLVSRDLD 268
>gi|333021096|gb|EGK40353.1| protein TolQ [Shigella flexneri K-227]
Length = 210
Score = 207 bits (528), Expect = 8e-52, Method: Composition-based stats.
Identities = 61/201 (30%), Positives = 103/201 (51%), Gaps = 3/201 (1%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHN--IGLA 85
+ +L FSI SW++IIQ++ R+ FE FWSG L + + + + G
Sbjct: 1 MLILIGFSITSWAIIIQRTRILNAAAREAEAFEDKFWSGIELSRLYQESQGKRDNLTGSE 60
Query: 86 AIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLV 145
IF S E+ + + +P + + R M +++ RELE + + FLG++ S +
Sbjct: 61 QIFYSGFKEFVRLHRANSHAPEAVVEGASRAMRISMNRELENLETHIPFLGTVGSISPYI 120
Query: 146 GILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSK 204
G+ G V G+M F ++ + + PGI E+LI+ +GL +IP+ +AYN+ +
Sbjct: 121 GLFGTVWGIMHAFIALGAVKQATLQMVAPGIAEALIATAIGLFAAIPAVMAYNRLNQRVN 180
Query: 205 KFAMQMEGFANEFSAILSRQT 225
K + + F EF+AIL RQ
Sbjct: 181 KLELNYDNFMEEFTAILHRQA 201
>gi|262278155|ref|ZP_06055940.1| tolerance protein to group A colicins [Acinetobacter calcoaceticus
RUH2202]
gi|262258506|gb|EEY77239.1| tolerance protein to group A colicins [Acinetobacter calcoaceticus
RUH2202]
Length = 232
Score = 207 bits (528), Expect = 9e-52, Method: Composition-based stats.
Identities = 63/220 (28%), Positives = 113/220 (51%), Gaps = 3/220 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+ I L +Q V+ ++ +L + SI SW +I + +++ ++ F+++FWSG L
Sbjct: 9 LHISDLILQASPVVQLVMLILLLASIFSWYLIAKLHMSYKKAHQEDEHFQKMFWSGAELN 68
Query: 71 TVCKSLK-NHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
T+ + + N GL IF +SE+ K + A I + +R++ V ++R+ +
Sbjct: 69 TLYNNAQLNSKRSGLEDIFYQGLSEFFKLKKRQAPVSQTI-EGTERILRVGLSRDQSHLE 127
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCV 188
L L S+ S +G+ G V G+M F +A + ++ PGI E+LI+ +GL
Sbjct: 128 YGLGSLASIGSVAPYIGLFGTVWGIMNAFIGLAAVDQVTLATVAPGIAEALIATAIGLFA 187
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
+IP+ +A+N F S+ FA E A+L RQ+ G+
Sbjct: 188 AIPAVLAFNHFTSKSESVYSDRALFAEEMIALLQRQSVGS 227
>gi|168819784|ref|ZP_02831784.1| TonB-system energizer ExbB [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|205343445|gb|EDZ30209.1| TonB-system energizer ExbB [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
Length = 244
Score = 207 bits (528), Expect = 9e-52, Method: Composition-based stats.
Identities = 56/227 (24%), Positives = 107/227 (47%), Gaps = 4/227 (1%)
Query: 6 LAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS 65
L D+S++ ++ + VKC++ L + S+++W++ KSV F T +R+ + +
Sbjct: 5 LMQTDLSVWGMYQHADIVVKCVMIGLILASVVTWAIFFSKSVEFFTQKRRLKREQLQLAD 64
Query: 66 GQSLETVCKSLKNHHNIGL-AAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARE 124
+SL+ L A + A +E + S +G+ GI++R ++ +A
Sbjct: 65 VRSLDQASDIAAGFSAKSLSAQLINEAQNELELS--QGSEDNEGIKERTGFRLERRVAAA 122
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISIL 183
+ +L ++ + VG+ G V G+M F IA + N+ V PGI E+L++
Sbjct: 123 GRYMGRGNGYLATIGAISPFVGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGIAEALLATA 182
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
+GL +IP+ + YN F + + A + + SR + N S
Sbjct: 183 IGLVAAIPAVVIYNIFARQIGSYKATLGDVAAQVLLLQSRDLDLNAS 229
>gi|254428812|ref|ZP_05042519.1| protein TolQ [Alcanivorax sp. DG881]
gi|196194981|gb|EDX89940.1| protein TolQ [Alcanivorax sp. DG881]
Length = 239
Score = 207 bits (528), Expect = 9e-52, Method: Composition-based stats.
Identities = 53/223 (23%), Positives = 106/223 (47%), Gaps = 2/223 (0%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
+ D++I+ L L V+ ++ +L + S+ SW +I+ + + + ++F F
Sbjct: 1 MNDMTIWGLVSDASLVVQAVMLVLILASVGSWCLIVLRHLAMRRGEKHQKQFLATFRGED 60
Query: 68 SLETVCKS-LKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
+L+++ + + H L +F + +E++ SP +Q+ ++R+M I+ +
Sbjct: 61 NLDSLAQLPVPGHRQAALQTLFNAGYAEYQLLHGDWDASPASVQEGVERVMQGVISEQEA 120
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLG 185
++ LSFL ++ S +G+ G V G+M F ++ + PGI E+LI+ +G
Sbjct: 121 DLEAGLSFLATVGSVSPYIGLFGTVWGIMNSFIGLSQVQQATLSTVAPGIAEALIATAIG 180
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
L +IP+ IAYN+ ++ F E L R G
Sbjct: 181 LFAAIPAVIAYNRLSARGQRLIASSYAFGTELQQRLHRLLYGK 223
>gi|209522409|ref|ZP_03271017.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. H160]
gi|209497152|gb|EDZ97399.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. H160]
Length = 256
Score = 207 bits (528), Expect = 9e-52, Method: Composition-based stats.
Identities = 58/228 (25%), Positives = 98/228 (42%), Gaps = 14/228 (6%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
M +YGLA ++ + + I+ +L I S+LSW+VII K I LRR R +
Sbjct: 1 MQHYGLA-------NVWDSGDIVTRGILCVLVIMSVLSWTVIIVKLWQLIRLRRVTRHSD 53
Query: 61 QLFWSGQSLETVCKSLK----NHHNIGLAAIFMSAMSE--WKKSCDKGARSPIGIQDRID 114
FWS + +L N H+ L A+ ++ + + I + D I
Sbjct: 54 ARFWSADRFDDGLHALGHPESNAHDNPLLALALAGHEAATHHRQTQQHLHDRIDVSDWIT 113
Query: 115 RMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG 174
R + + + + L+ L S+ S VG+ G V G+ I ++ + G
Sbjct: 114 RRLQDTMDETIARLQSGLAILASIGSTAPFVGLFGTVWGIYHALIVIGETGQTSIDHVAG 173
Query: 175 -IIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+ ESLI GL V+IP+ + YN ++ +++ FA+ A
Sbjct: 174 PVGESLIMTAFGLFVAIPAVLGYNGLTRANRSIVARLKRFAHGLHAYF 221
>gi|91782684|ref|YP_557890.1| biopolymer transport transmembrane protein, MotA/TolQ/ExbB like
[Burkholderia xenovorans LB400]
gi|91686638|gb|ABE29838.1| outer membrane transport energization protein ExbB [Burkholderia
xenovorans LB400]
Length = 242
Score = 207 bits (528), Expect = 9e-52, Method: Composition-based stats.
Identities = 58/228 (25%), Positives = 99/228 (43%), Gaps = 14/228 (6%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
M NYGLA ++ Q + I L I S++SWSVI+ K N + L+R + E
Sbjct: 1 MQNYGLA-------HVWAQGDFVTRGIALTLLIMSVMSWSVIVIKGWNVMRLKRLTKNAE 53
Query: 61 QLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRID------ 114
Q FW L K L + F++ +++ D ++ + DR+D
Sbjct: 54 QAFWHSDDLADGVKKLGAGSSTPQDNPFLALALSGQEAADHHHQTQPHLHDRMDVSDWVT 113
Query: 115 RMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG 174
R + + + + L+ L S+ S VG+ G V G+ +I +++ + G
Sbjct: 114 RCLKDTMDESVARMQSGLAILASIGSTAPFVGLFGTVWGIYHALLAIGASGQSSIDQVAG 173
Query: 175 -IIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+ E+LI GL V+IP+ + YN +K ++ FA+ A
Sbjct: 174 PVGEALIMTAFGLFVAIPAVLGYNALTRANKAVVAKLSRFAHGLHAFF 221
>gi|184159153|ref|YP_001847492.1| biopolymer transport protein [Acinetobacter baumannii ACICU]
gi|183210747|gb|ACC58145.1| Biopolymer transport protein [Acinetobacter baumannii ACICU]
Length = 232
Score = 207 bits (527), Expect = 1e-51, Method: Composition-based stats.
Identities = 63/220 (28%), Positives = 113/220 (51%), Gaps = 3/220 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+ I L +Q V+ ++ +L + SI SW +I + +++ R+ F+++FWSG
Sbjct: 9 LHISDLILQASPVVQLVMLILLLASIFSWYLIAKLHMSYKKARQDDEHFQKMFWSGAEFN 68
Query: 71 TVCKSLK-NHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
T+ + + N GL IF +SE+ K + A + I + +R++ V ++R+ +
Sbjct: 69 TLYNNAQLNSKRSGLEDIFYQGLSEFFKLKKRQAPTSQMI-EGTERILRVGLSRDQGSLE 127
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCV 188
L L S+ S +G+ G V G+M F +A + ++ PGI E+LI+ +GL
Sbjct: 128 YGLGTLASIGSVAPYIGLFGTVWGIMNAFIGLAAVDQVTLATVAPGIAEALIATAIGLFA 187
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
+IP+ +A+N F S+ FA E A+L RQ+ G+
Sbjct: 188 AIPAVLAFNHFTAKSESVYSDRALFAEEMIALLQRQSVGS 227
>gi|148653364|ref|YP_001280457.1| Tol-Pal system, TolQ [Psychrobacter sp. PRwf-1]
gi|148572448|gb|ABQ94507.1| Tol-Pal system, TolQ [Psychrobacter sp. PRwf-1]
Length = 263
Score = 207 bits (527), Expect = 1e-51, Method: Composition-based stats.
Identities = 64/217 (29%), Positives = 113/217 (52%), Gaps = 3/217 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
I++ AL + L V+ ++ +L + S++ W +I + S T +RQ + FE FWSG+ L
Sbjct: 22 INLIALITEASLLVQIVMAILLLASVICWVLIFRLSARLGTAKRQDQHFENWFWSGEDLS 81
Query: 71 TVCKSLKNHHN-IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+ + ++N + GLA IF SE+ + K + I D ++R + V + R+ + +
Sbjct: 82 KLYQGIQNSPDRHGLANIFYVGFSEFLRMNKKR-QPKDHIIDGVERKLRVGLGRQQQSLE 140
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCV 188
L+ L S+ S +G+ G V G+M F +A ++ PGI E+LI+ +GL
Sbjct: 141 SGLAVLASIGSVSPYIGLFGTVWGIMNAFLGLAQVEQVSLSAVAPGIAEALIATAMGLFA 200
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ +AYN F + F +E + +L R+T
Sbjct: 201 AIPAVLAYNHFTAKAAGIYDSRALFCDEMTGMLQRET 237
>gi|157372444|ref|YP_001480433.1| TonB-system energizer ExbB type-1 [Serratia proteamaculans 568]
gi|157324208|gb|ABV43305.1| TonB-system energizer ExbB type-1 [Serratia proteamaculans 568]
Length = 323
Score = 207 bits (527), Expect = 1e-51, Method: Composition-based stats.
Identities = 50/211 (23%), Positives = 102/211 (48%), Gaps = 4/211 (1%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
MD+S++ ++ + VK ++ L + SI++W+++ K +R+ R + + +S
Sbjct: 87 MDLSVWGMYQHADIVVKIVMIGLVLASIVTWTILFSKGSELFRAKRRLRREQLALANVRS 146
Query: 69 LETVCKSLKNHHNIGLAAIFM-SAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
L+ + +N + ++++ + A +E + S + GI++R ++ +A
Sbjct: 147 LDEASELAQNFSDESISSVLLNDAQNELELSAESN--DNNGIKERTGFRLERRVAGYSRN 204
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
+ FL ++ + VG+ G V G+M F IA + N+ V PGI E+L++ LGL
Sbjct: 205 MGRGNGFLATIGAISPFVGLFGTVWGIMNSFIGIAHSQTTNLAVVAPGIAEALLATALGL 264
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEF 217
+IP+ + YN F Q+ A +
Sbjct: 265 VAAIPAVVIYNIFARVISGHRAQVGDVAAQV 295
>gi|332086664|gb|EGI91804.1| tonB-system energizer ExbB [Shigella boydii 5216-82]
Length = 239
Score = 207 bits (527), Expect = 1e-51, Method: Composition-based stats.
Identities = 55/224 (24%), Positives = 108/224 (48%), Gaps = 4/224 (1%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
D+S++ ++ + VKC++ L + S+++W++ KSV F +R+ + +QL +S
Sbjct: 3 TDLSVWGMYQHADIVVKCVMIGLILASVVTWAIFFSKSVEFFNQKRRLKREQQLLAEARS 62
Query: 69 LETVCKSLKNHHNIGLA-AIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
L + + L+ + A +E + S +G+ GI++R ++ +A +
Sbjct: 63 LNQANDIAADFGSKSLSLHLINEAQNELELS--EGSDDNEGIKERTSFRLERRVAAVGRQ 120
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
+ +L ++ + VG+ G V G+M F IA + N+ V PGI E+L++ +GL
Sbjct: 121 MGRGNGYLATIGAISPFVGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGIAEALLATAIGL 180
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
+IP+ + YN F F + A + + SR + S
Sbjct: 181 VAAIPAVVIYNVFARQIGGFKAMLGDVAAQVLLLQSRDLDLEAS 224
>gi|307579946|gb|ADN63915.1| protein TolQ [Xylella fastidiosa subsp. fastidiosa GB514]
Length = 256
Score = 207 bits (527), Expect = 1e-51, Method: Composition-based stats.
Identities = 69/225 (30%), Positives = 112/225 (49%), Gaps = 4/225 (1%)
Query: 5 GLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFW 64
G I+ L ++ + VK I+ LL + S SW +I +K+ F R+ +FE FW
Sbjct: 28 GTTHGGINYIDLMLKASIPVKIIVLLLLLGSFTSWLIIFRKARVFKQANREADQFENRFW 87
Query: 65 SGQSLETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIA 122
SG L + S + + GL AIF E+ + ++ P + R+M
Sbjct: 88 SGTDLSKLYASTNSRKHMVSGLEAIFEGGFREFTRLRERRRLDPRIQIEGAQRVMRTNFM 147
Query: 123 RELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLI 180
RE++++ L L ++ S VG++G V G+M + +G + PGI E+L
Sbjct: 148 REMDQLERNLELLANIGSTAPYVGLVGTVFGIMVTMHDMISSGDQAGIAAVAPGISEALF 207
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+ +GL V+IP+ AYN+F ++ +++ E FA EFSAIL RQ
Sbjct: 208 ATAVGLFVAIPAVWAYNRFTTRLERLSVRYETFAEEFSAILQRQV 252
>gi|237797794|ref|ZP_04586255.1| TonB system transport protein ExbB1 [Pseudomonas syringae pv.
oryzae str. 1_6]
gi|331020644|gb|EGI00701.1| TonB system transport protein ExbB1 [Pseudomonas syringae pv.
oryzae str. 1_6]
Length = 313
Score = 206 bits (526), Expect = 1e-51, Method: Composition-based stats.
Identities = 56/226 (24%), Positives = 104/226 (46%), Gaps = 5/226 (2%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N+ G+A D+S + ++ + VK ++ L I SI++W++ I K + +R+ R
Sbjct: 73 NSLGMA-HDLSPWGMYQNADVVVKAVMIGLAIASIITWTIWISKGFELLGAKRRLRGEIA 131
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
+SL S + + A+ E + S +R GI++R+ ++ +
Sbjct: 132 NLKKARSLNEASASASKEGTLA-HLLVHDALEEMRLSA--NSREREGIKERVSFRLERLV 188
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLI 180
A ++ L ++ S VG+ G V G+M F IA + N+ V PGI E+L+
Sbjct: 189 AACGRNMSMGTGVLATIGSTAPFVGLFGTVWGIMNSFIGIAKTQTTNLAVVAPGIAEALL 248
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+ LGL +IP+ + YN F + Q+ + ++SR +
Sbjct: 249 ATALGLVAAIPAVVIYNVFARSIAGYKAQVSDASAHVLLLVSRDLD 294
>gi|152979451|ref|YP_001345080.1| Tol-Pal system TolQ [Actinobacillus succinogenes 130Z]
gi|150841174|gb|ABR75145.1| Tol-Pal system TolQ [Actinobacillus succinogenes 130Z]
Length = 228
Score = 206 bits (526), Expect = 1e-51, Method: Composition-based stats.
Identities = 67/223 (30%), Positives = 114/223 (51%), Gaps = 4/223 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
+++ LF++ + V+ +I +L FSI+SW++IIQ+S + FE FWSG+ L
Sbjct: 4 ELNFLDLFLKASIVVQIVILILISFSIISWAIIIQRSRILTQALKDSMAFEDRFWSGEDL 63
Query: 70 ETVCKSLKNHHN---IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
+ L N + G IF E+ + A +P I R M++A+ RE+E
Sbjct: 64 TKLYDGLSNRRDGMMSGSEQIFYVGFKEFSRLKQVNAEAPEAIIKGSTRAMNLAMNREVE 123
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLG 185
+ ++ FL +++S +G+ G V G+M F +++G + + PGI E+LI+ +G
Sbjct: 124 TLESRIPFLATVASVSPYIGLFGTVWGIMHAFMALSGAKQATLQMVAPGIAEALIATAIG 183
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
L +IP+ +AYN+ K F +EF+ IL RQ
Sbjct: 184 LFAAIPAVMAYNRLSLRVNKLEQNYGNFIDEFTTILQRQVFAK 226
>gi|315122878|ref|YP_004063367.1| tolQ protein [Candidatus Liberibacter solanacearum CLso-ZC1]
gi|313496280|gb|ADR52879.1| tolQ protein [Candidatus Liberibacter solanacearum CLso-ZC1]
Length = 213
Score = 206 bits (526), Expect = 1e-51, Method: Composition-based stats.
Identities = 164/212 (77%), Positives = 195/212 (91%)
Query: 18 MQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLK 77
MQMGLAVKC+I LL +FSI SWS+I+QK VNFI +RR FREFEQLFWSGQSLE++CK LK
Sbjct: 1 MQMGLAVKCVIILLLVFSIFSWSIIVQKIVNFIMIRRNFREFEQLFWSGQSLESLCKLLK 60
Query: 78 NHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGS 137
+ HN+GLAAIFMSAM EWKKS ++GARS IG+QDRIDRMMDVAIARELE+ITE+LSFLG+
Sbjct: 61 DKHNVGLAAIFMSAMCEWKKSYEQGARSSIGMQDRIDRMMDVAIARELEDITERLSFLGT 120
Query: 138 MSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYN 197
MSS GLLVG+LGAVLGM+GFFQ+IAG ++N + IP IIESL+SI+LGLCVSIPSSIAYN
Sbjct: 121 MSSVGLLVGLLGAVLGMVGFFQNIAGPHANIIFFIPEIIESLMSIILGLCVSIPSSIAYN 180
Query: 198 KFIEDSKKFAMQMEGFANEFSAILSRQTEGNI 229
KF+ED+KKF++QMEGF++EFSAILSRQTEG++
Sbjct: 181 KFMEDAKKFSVQMEGFSDEFSAILSRQTEGHV 212
>gi|257485271|ref|ZP_05639312.1| tolQ protein [Pseudomonas syringae pv. tabaci ATCC 11528]
Length = 236
Score = 206 bits (526), Expect = 1e-51, Method: Composition-based stats.
Identities = 58/220 (26%), Positives = 106/220 (48%), Gaps = 3/220 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
++I+ L L VK ++ +L + S++SW +IIQ+S+ R F+Q F + L
Sbjct: 8 MTIWGLISDASLLVKAVMLILLLASLVSWYLIIQRSLALGHYERTLDAFQQRFRAEAELA 67
Query: 71 TVCKSL--KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
T+ G+ +F + +E+ + + P + ++R + VAI+ + ++
Sbjct: 68 TLYAESHSAQEGADGIERVFNAGYAEYVQLKPRPGIEPDVVPSGVERALQVAISEQELQL 127
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
+ L FL ++ S +G+ G V G+M F ++ + PGI E+LI+ +GL
Sbjct: 128 EKGLQFLATVGSVSPYIGLFGTVWGIMNSFIGLSQVQQATLSTVAPGIAEALIATAIGLF 187
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEG 227
+IP+ IAYN F + + F NE L+R +G
Sbjct: 188 AAIPAVIAYNCFAARGQTLTARYYSFGNELQVRLNRTLQG 227
>gi|28870405|ref|NP_793024.1| tolQ protein [Pseudomonas syringae pv. tomato str. DC3000]
gi|213969870|ref|ZP_03398004.1| tolQ protein [Pseudomonas syringae pv. tomato T1]
gi|301386269|ref|ZP_07234687.1| tolQ protein [Pseudomonas syringae pv. tomato Max13]
gi|302063955|ref|ZP_07255496.1| tolQ protein [Pseudomonas syringae pv. tomato K40]
gi|302135263|ref|ZP_07261253.1| tolQ protein [Pseudomonas syringae pv. tomato NCPPB 1108]
gi|28853652|gb|AAO56719.1| tolQ protein [Pseudomonas syringae pv. tomato str. DC3000]
gi|213925418|gb|EEB58979.1| tolQ protein [Pseudomonas syringae pv. tomato T1]
Length = 236
Score = 206 bits (526), Expect = 1e-51, Method: Composition-based stats.
Identities = 57/220 (25%), Positives = 108/220 (49%), Gaps = 3/220 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
++++ L L VK ++ +L + S++SW +I+Q+S+ R F+Q F S L
Sbjct: 8 MTVWGLISDASLLVKAVMLILLLASLVSWFLIVQRSLALRHYERSLDAFQQRFRSEAELA 67
Query: 71 TVCKSL--KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ + G+ +IF + +E+ + + P + ++R + VAI+ + ++
Sbjct: 68 PLYAQASSAQSDSGGIGSIFQAGYAEYMQLKHRPGIDPDVVLSGVERSLQVAISEQELQL 127
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
+ L FL ++ S +G+ G V G+M F ++ + PGI E+LI+ +GL
Sbjct: 128 EKGLQFLATVGSVSPYIGLFGTVWGIMNSFIGLSQVQQATLSTVAPGIAEALIATAIGLF 187
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEG 227
+IP+ IAYN+F + + F NE L+R +G
Sbjct: 188 AAIPAVIAYNRFAARGQTLTARYYTFGNELQVRLNRTLQG 227
>gi|317486274|ref|ZP_07945106.1| TolQ protein [Bilophila wadsworthia 3_1_6]
gi|316922444|gb|EFV43698.1| TolQ protein [Bilophila wadsworthia 3_1_6]
Length = 230
Score = 206 bits (526), Expect = 1e-51, Method: Composition-based stats.
Identities = 57/223 (25%), Positives = 110/223 (49%), Gaps = 2/223 (0%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
MD+SI +L Q L K ++ +L S+ SW+++ +K +N ++ + F +
Sbjct: 1 MDLSILSLLAQATLVAKAVLVVLLFMSVFSWALMFRKWMNIRAALKKAADGMDRFNHARD 60
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
L +SL + L + ++E+ +S + G + + D + R + + E+ +
Sbjct: 61 LREAVQSLGGDPDSPLYTVAHEGVTEFNRSKEAGNSEDV-VVDNVRRALRQGVDMEMTRL 119
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLC 187
T LSFL + ++ +G+ G V G+M F +I S ++ ++ PGI E+LI+ +GL
Sbjct: 120 TSSLSFLATSANTAPFIGLFGTVWGIMNTFHAIGAMKSASLATVAPGISEALIATAMGLL 179
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
V+IP++I YN F ++ FA F + R+ + +
Sbjct: 180 VAIPATIGYNTFHGSLGVLETRLVNFAGMFLNRVQRELNAHRA 222
>gi|330875931|gb|EGH10080.1| tolQ protein [Pseudomonas syringae pv. morsprunorum str. M302280PT]
Length = 236
Score = 206 bits (526), Expect = 1e-51, Method: Composition-based stats.
Identities = 56/220 (25%), Positives = 107/220 (48%), Gaps = 3/220 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
++++ L L VK ++ +L + S++SW +I+Q+S+ R F+Q F S L
Sbjct: 8 MTVWGLISDASLLVKAVMLILLLASLVSWFLIVQRSLALRHYERSLDAFQQRFRSEAELA 67
Query: 71 TVCKSL--KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ + G+ +F + +E+ + + P + ++R + VAI+ + ++
Sbjct: 68 PLYAQASSAQSDSGGIGPVFQAGYAEYMQLKHRPGIDPDVVLSGVERSLQVAISEQELQL 127
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
+ L FL ++ S +G+ G V G+M F ++ + PGI E+LI+ +GL
Sbjct: 128 EKGLQFLATVGSVSPYIGLFGTVWGIMNSFIGLSQVQQATLSTVAPGIAEALIATAIGLF 187
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEG 227
+IP+ IAYN+F + + F NE L+R +G
Sbjct: 188 AAIPAVIAYNRFAARGQTLTARYYTFGNELQVRLNRTLQG 227
>gi|288550403|ref|ZP_05970300.2| TonB-system energizer ExbB [Enterobacter cancerogenus ATCC 35316]
gi|288315079|gb|EFC54017.1| TonB-system energizer ExbB [Enterobacter cancerogenus ATCC 35316]
Length = 238
Score = 206 bits (526), Expect = 1e-51, Method: Composition-based stats.
Identities = 54/224 (24%), Positives = 108/224 (48%), Gaps = 4/224 (1%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
D+S++ ++ + VK ++ L + S+++W++ KSV I+ +R+ + +Q +S
Sbjct: 3 TDLSVWGMYHHADIVVKIVMIGLILASVVTWAIFFSKSVELISQKRRLKREQQQLAEARS 62
Query: 69 LETVCKSLKNHHNIGLAAIFM-SAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
L+ + H L ++ + A +E + S G+ GI++R ++ +A
Sbjct: 63 LDQASDMTSSFHAKSLTSLLVNEAQNELELSA--GSEDNEGIKERTGFRLERRVAAVGRH 120
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
+ +L ++ + VG+ G V G+M F IA + N+ V PGI E+L++ +GL
Sbjct: 121 MGRGNGYLATIGAISPFVGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGIAEALLATAIGL 180
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
+IP+ + YN F + + A + + SR + N S
Sbjct: 181 VAAIPAVVIYNIFARMIGSYKATLGDVAAQVLLLQSRDLDLNAS 224
>gi|307730278|ref|YP_003907502.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. CCGE1003]
gi|307584813|gb|ADN58211.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. CCGE1003]
Length = 242
Score = 206 bits (526), Expect = 2e-51, Method: Composition-based stats.
Identities = 58/228 (25%), Positives = 98/228 (42%), Gaps = 14/228 (6%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
M NYGLA ++ Q + I L + S+LSWSVI+ K N + L R + E
Sbjct: 1 MQNYGLA-------HVWAQGDFVTRGIALALLVMSVLSWSVIVVKGWNVVRLNRLTKNAE 53
Query: 61 QLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRID------ 114
Q FW L K L + F++ +++ D ++ + DR+D
Sbjct: 54 QAFWHSDDLADGVKKLGAGSSTPQDNPFLALALSGQEAADHHHQTQPHLHDRMDVSDWVT 113
Query: 115 RMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG 174
R + + + + L+ L S+ S VG+ G V G+ +I +++ + G
Sbjct: 114 RCLKDTMDESVARMQSGLAILASIGSTAPFVGLFGTVWGIYHALLAIGASGQSSIDQVAG 173
Query: 175 -IIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+ E+LI GL V+IP+ + YN +K ++ FA+ A
Sbjct: 174 PVGEALIMTAFGLFVAIPAVLGYNALTRANKAIVAKLSRFAHGLHAFF 221
>gi|28198793|ref|NP_779107.1| TolQ protein [Xylella fastidiosa Temecula1]
gi|182681492|ref|YP_001829652.1| protein TolQ [Xylella fastidiosa M23]
gi|28056884|gb|AAO28756.1| TolQ protein [Xylella fastidiosa Temecula1]
gi|182631602|gb|ACB92378.1| protein TolQ [Xylella fastidiosa M23]
Length = 257
Score = 206 bits (526), Expect = 2e-51, Method: Composition-based stats.
Identities = 69/225 (30%), Positives = 112/225 (49%), Gaps = 4/225 (1%)
Query: 5 GLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFW 64
G I+ L ++ + VK I+ LL + S SW +I +K+ F R+ +FE FW
Sbjct: 29 GTTHGGINYIDLMLKASIPVKIIVLLLLLGSFTSWLIIFRKARVFKQANREADQFENRFW 88
Query: 65 SGQSLETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIA 122
SG L + S + + GL AIF E+ + ++ P + R+M
Sbjct: 89 SGTDLSKLYASTNSRKHMVSGLEAIFEGGFREFTRLRERRRLDPRIQIEGAQRVMRTNFM 148
Query: 123 RELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLI 180
RE++++ L L ++ S VG++G V G+M + +G + PGI E+L
Sbjct: 149 REMDQLERNLELLANIGSTAPYVGLVGTVFGIMVTMHDMISSGDQAGIAAVAPGISEALF 208
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+ +GL V+IP+ AYN+F ++ +++ E FA EFSAIL RQ
Sbjct: 209 ATAVGLFVAIPAVWAYNRFTTRLERLSVRYETFAEEFSAILQRQV 253
>gi|326622471|gb|EGE28816.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Dublin str. 3246]
Length = 210
Score = 206 bits (526), Expect = 2e-51, Method: Composition-based stats.
Identities = 61/201 (30%), Positives = 103/201 (51%), Gaps = 3/201 (1%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNI--GLA 85
+ +L FSI SW++IIQ++ R+ FE FWSG L + + + + G
Sbjct: 1 MLILIGFSIASWAIIIQRTRILNAAAREAEAFEDKFWSGIELSRLYQESQGRRDSLSGSE 60
Query: 86 AIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLV 145
IF S E+ + + +P + + R M +++ RELE + + FLG++ S +
Sbjct: 61 QIFYSGFKEFVRLHRANSHAPEAVVEGASRAMRISMNRELETLETHIPFLGTVGSISPYI 120
Query: 146 GILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSK 204
G+ G V G+M F ++ + + PGI E+LI+ +GL +IP+ +AYN+ +
Sbjct: 121 GLFGTVWGIMHAFIALGAVKQATLQMVAPGIAEALIATAIGLFAAIPAVMAYNRLNQRVN 180
Query: 205 KFAMQMEGFANEFSAILSRQT 225
K + + F EF+AIL RQ
Sbjct: 181 KLELNYDNFMEEFTAILHRQA 201
>gi|153873820|ref|ZP_02002274.1| MotA/TolQ/ExbB proton channel [Beggiatoa sp. PS]
gi|152069718|gb|EDN67730.1| MotA/TolQ/ExbB proton channel [Beggiatoa sp. PS]
Length = 236
Score = 206 bits (525), Expect = 2e-51, Method: Composition-based stats.
Identities = 65/225 (28%), Positives = 116/225 (51%), Gaps = 4/225 (1%)
Query: 6 LAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS 65
+ +++S L ++ L V+ ++ LL + SI SW++I +KS RR FE FW
Sbjct: 1 MPELNLSFIQLILEASLLVQMVMLLLLLISIYSWTLIFRKSRFLKRARRTSDHFEDRFWK 60
Query: 66 GQSLETVCKSL--KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAR 123
+ L + + + G+A IF S E+ K + +P + + R M VA+ R
Sbjct: 61 FKDLNALYNRIVSEEEEPKGMANIFTSGYMEFVKLRKQPNITPTTLLEGSQRAMRVALHR 120
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAG--YYSNNVVSIPGIIESLIS 181
E++E+ L+ L ++ S +G+ G V G+M F ++ + PGI E+LI+
Sbjct: 121 EMDELDANLATLATVGSVSPYIGLFGTVWGIMNSFHALGTMEQQVTLAMVAPGISEALIA 180
Query: 182 ILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+GL +IP+ +AYN +++D + + + F +EF++IL RQ
Sbjct: 181 TAMGLFAAIPAVMAYNNYVDDVDRLITRYDTFLDEFTSILQRQAH 225
>gi|320087608|emb|CBY97372.1| Biopolymer transport protein exbB [Salmonella enterica subsp.
enterica serovar Weltevreden str. 2007-60-3289-1]
Length = 239
Score = 206 bits (525), Expect = 2e-51, Method: Composition-based stats.
Identities = 55/224 (24%), Positives = 106/224 (47%), Gaps = 4/224 (1%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
D+S++ ++ + VKC++ L + S+++W++ KSV F T +R+ + + +S
Sbjct: 3 TDLSVWGMYQHADIVVKCVMIGLILASVVTWAIFFSKSVEFFTQKRRLKREQLQLADVRS 62
Query: 69 LETVCKSLKNHHNIGL-AAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
L+ L A + A +E + S +G+ GI++R ++ +A
Sbjct: 63 LDQASDIAAGFSAKSLSAQLINEAQNELELS--QGSEDNEGIKERTGFRLERRVAAAGRY 120
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
+ +L ++ + VG+ G V G+M F IA + N+ V PGI E+L++ +GL
Sbjct: 121 MGRGNGYLATIGAISPFVGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGIAEALLATAIGL 180
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
+IP+ + YN F + + A + + SR + N S
Sbjct: 181 VAAIPAVVIYNIFARQIGSYKATLGDVAAQVLLLQSRDLDLNAS 224
>gi|330968208|gb|EGH68468.1| tolQ protein [Pseudomonas syringae pv. actinidiae str. M302091]
Length = 236
Score = 206 bits (525), Expect = 2e-51, Method: Composition-based stats.
Identities = 57/220 (25%), Positives = 108/220 (49%), Gaps = 3/220 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
++++ L L VK ++ +L + S++SW +I+Q+S+ R F+Q F S L
Sbjct: 8 MTVWGLVSDASLLVKAVMLILLLASLVSWFLIVQRSLALRHYERSLDAFQQRFRSEAELA 67
Query: 71 TVCKSL--KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ + G+ +IF + +E+ + + P + ++R + VAI+ + ++
Sbjct: 68 PLYAQASSAQSDSGGIGSIFQAGYAEYVQLKHRPGIDPDVVLSGVERSLQVAISEQELQL 127
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
+ L FL ++ S +G+ G V G+M F ++ + PGI E+LI+ +GL
Sbjct: 128 EKGLQFLATVGSVSPYIGLFGTVWGIMNSFIGLSQVQQATLSTVAPGIAEALIATAIGLF 187
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEG 227
+IP+ IAYN+F + + F NE L+R +G
Sbjct: 188 AAIPAVIAYNRFAARGQTLTARYYTFGNELQVRLNRTLQG 227
>gi|260551458|ref|ZP_05825642.1| hypothetical protein HMPREF0014_02656 [Acinetobacter sp. RUH2624]
gi|260405452|gb|EEW98945.1| hypothetical protein HMPREF0014_02656 [Acinetobacter sp. RUH2624]
Length = 232
Score = 206 bits (525), Expect = 2e-51, Method: Composition-based stats.
Identities = 63/220 (28%), Positives = 112/220 (50%), Gaps = 3/220 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+ I L +Q V+ ++ +L + SI SW +I + + + R+ F+++FWSG L
Sbjct: 9 LHISDLILQASPVVQLVMLILLLASIFSWYLIAKLHMGYKKARQGDEHFQKMFWSGAELN 68
Query: 71 TVCKSLK-NHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
T+ + + N GL IF +SE+ K + A + I + +R++ V ++R+ +
Sbjct: 69 TLYNNAQLNSKRSGLEDIFYQGLSEFFKLKKRNASTSQTI-EGTERILRVGLSRDQGTLE 127
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCV 188
L L S+ S +G+ G V G+M F +A + ++ PGI E+LI+ +GL
Sbjct: 128 YGLGTLASIGSVAPYIGLFGTVWGIMNAFIGLAAVDQVTLATVAPGIAEALIATAIGLFA 187
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
+IP+ +A+N F + FA E A+L RQ+ G+
Sbjct: 188 AIPAVLAFNHFTAKGESVYSDRALFAEEMIALLQRQSVGS 227
>gi|300718399|ref|YP_003743202.1| Biopolymer transport ExbB protein [Erwinia billingiae Eb661]
gi|299064235|emb|CAX61355.1| Biopolymer transport ExbB protein [Erwinia billingiae Eb661]
Length = 238
Score = 206 bits (525), Expect = 2e-51, Method: Composition-based stats.
Identities = 49/219 (22%), Positives = 98/219 (44%), Gaps = 2/219 (0%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
D+S++ ++ + VK ++ L + S+++W++ KS +R+ + + +S
Sbjct: 3 TDLSVWGMYQHADIVVKVVMIGLLLASVVTWAIFFSKSFELSAAKRRLKNEQNALAGARS 62
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
L+ + + L F+ +E + G+ GI++R ++ +A
Sbjct: 63 LQEAAQISASFKAGSLTTQFLKE-AENELELSAGSDDDNGIKERTSFRLERRVAFFSRHA 121
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
FL ++ + VG+ G V G+M F IA + N+ V PGI E+L++ +GL
Sbjct: 122 GRGNGFLATIGAIAPFVGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGIAEALLATAIGLV 181
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ + YN F + M A + + SR +
Sbjct: 182 AAIPAVVIYNVFARLIGNYKASMGDVAAQVMLLQSRDLD 220
>gi|149915617|ref|ZP_01904143.1| MotA/TolQ/ExbB proton channel [Roseobacter sp. AzwK-3b]
gi|149810509|gb|EDM70352.1| MotA/TolQ/ExbB proton channel [Roseobacter sp. AzwK-3b]
Length = 231
Score = 206 bits (525), Expect = 2e-51, Method: Composition-based stats.
Identities = 79/219 (36%), Positives = 121/219 (55%), Gaps = 1/219 (0%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
MD S++ L+ + + VK ++ +L I S +WS+IIQK + + R F++ FWSG+
Sbjct: 12 MDFSLWGLYARATIIVKLVMWMLVIASFWAWSIIIQKIILYRKARADAAAFDRRFWSGEP 71
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
L+ + + + IF + M EW++S G RIDR MDVAI++E EE+
Sbjct: 72 LDELFDEIGPEPSGRSERIFAAGMMEWRRSHRNDGGLIAGATARIDRSMDVAISKETEEL 131
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
L L ++ S +G+ G V G+M F IA + ++ V PGI E+L++ LGL
Sbjct: 132 QSSLQILATIGSTTPFIGLFGTVWGIMNAFIEIAEQQNTSLAVVAPGIAEALLATGLGLL 191
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ I YNK DS + E FA+EF+ ILSRQ +
Sbjct: 192 AAIPAVIFYNKLSSDSDRIVGSYEAFADEFATILSRQLD 230
>gi|51597681|ref|YP_071872.1| MotA/TolQ/ExbB proton channel family protein [Yersinia
pseudotuberculosis IP 32953]
gi|145597776|ref|YP_001161852.1| MotA/TolQ/ExbB proton channel family protein [Yersinia pestis
Pestoides F]
gi|186896821|ref|YP_001873933.1| tonB-system energizer ExbB [Yersinia pseudotuberculosis PB1/+]
gi|51590963|emb|CAH22621.1| Possible MotA/TolQ/ExbB proton channel family protein [Yersinia
pseudotuberculosis IP 32953]
gi|145209472|gb|ABP38879.1| MotA/TolQ/ExbB proton channel family protein [Yersinia pestis
Pestoides F]
gi|186699847|gb|ACC90476.1| tonB-system energizer ExbB [Yersinia pseudotuberculosis PB1/+]
Length = 345
Score = 206 bits (525), Expect = 2e-51, Method: Composition-based stats.
Identities = 49/212 (23%), Positives = 104/212 (49%), Gaps = 4/212 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
MD+S++ ++ + VK ++ L + SI++W+++ K RR+ R+ ++ +
Sbjct: 108 AMDLSVWGMYQNADVVVKGVMIGLVLASIVTWTILFSKGTELFRARRRLRQEHEVIGAVT 167
Query: 68 SLETVCKSLKNHHNIGLAA-IFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
L+T + ++ +++ + A++E + + GI++R ++ +A
Sbjct: 168 DLDTASERAEDFGQGSVSSLLLHEALNE--RLLSIESNDNNGIKERTAFRLERRVAAIGR 225
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLG 185
++ + FL ++ + VG+ G V G+M F IA + N+ V PGI E+L++ LG
Sbjct: 226 QMGKGNGFLATIGAISPFVGLFGTVWGIMNSFIGIAHSQTTNLAVVAPGIAEALLATALG 285
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEF 217
L +IP+ + YN F + Q+ A +
Sbjct: 286 LVAAIPAVVIYNIFARQIGNYRAQVGDVAAQV 317
>gi|295676102|ref|YP_003604626.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. CCGE1002]
gi|295435945|gb|ADG15115.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. CCGE1002]
Length = 243
Score = 206 bits (524), Expect = 2e-51, Method: Composition-based stats.
Identities = 58/228 (25%), Positives = 99/228 (43%), Gaps = 14/228 (6%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
M NYGLA ++ Q + I L I S++SWSVI+ K N + L+R + E
Sbjct: 1 MQNYGLA-------HVWAQGDFVTRGIALALLIMSVMSWSVIVVKGWNVVRLKRLTKNAE 53
Query: 61 QLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRID------ 114
Q FW L K L + F++ +++ D ++ + DR+D
Sbjct: 54 QAFWHSDDLADGVKKLGGGASTPHDNPFLALALSGQEAADHHHQTQPHLHDRMDVSDWIT 113
Query: 115 RMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG 174
R + + + + L+ L S+ S VG+ G V G+ +I +++ + G
Sbjct: 114 RCLKDTMDESVARMQSGLAILASIGSTAPFVGLFGTVWGIYHALLAIGASGQSSIDQVAG 173
Query: 175 -IIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+ E+LI GL V+IP+ + YN +K ++ FA+ A
Sbjct: 174 PVGEALIMTAFGLFVAIPAVLGYNALTRANKAIVAKLSRFAHGLHAFF 221
>gi|320539417|ref|ZP_08039086.1| membrane spanning protein in TonB-ExbB-ExbD complex [Serratia
symbiotica str. Tucson]
gi|320030542|gb|EFW12552.1| membrane spanning protein in TonB-ExbB-ExbD complex [Serratia
symbiotica str. Tucson]
Length = 304
Score = 206 bits (524), Expect = 2e-51, Method: Composition-based stats.
Identities = 54/228 (23%), Positives = 105/228 (46%), Gaps = 4/228 (1%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
+ MD+S++ ++ + VK ++ L + SI++W+++ K +R+ +
Sbjct: 60 IQPPATGNMDLSVWGMYQHADIVVKVVMIGLVLASIVTWTILFAKGSELFCAKRRLLREQ 119
Query: 61 QLFWSGQSLETVCKSLKNHHNIGLAAIFM-SAMSEWKKSCDKGARSPIGIQDRIDRMMDV 119
L SL+ K ++ ++A+ + A +E S S GI++R ++
Sbjct: 120 WLLAEVHSLDEASKLAQSFSEQSISAVLLNDAQNELALSAKSNDNS--GIKERTGFRLER 177
Query: 120 AIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIES 178
+A ++ FL ++ + +G+ G V G+M F IA + N+ V PGI E+
Sbjct: 178 RVAAYSRDMARGSGFLATIGAISPFIGLFGTVWGIMNSFIGIAHSQTTNLAVVAPGIAEA 237
Query: 179 LISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
L++ LGLC +IP+ + YN F Q+ A + + SR +
Sbjct: 238 LLATALGLCAAIPAVVIYNIFARVISSHRAQVSDVAAQVMLLQSRDLD 285
>gi|224584956|ref|YP_002638755.1| biopolymer transport protein ExbB [Salmonella enterica subsp.
enterica serovar Paratyphi C strain RKS4594]
gi|224469484|gb|ACN47314.1| biopolymer transport ExbB protein [Salmonella enterica subsp.
enterica serovar Paratyphi C strain RKS4594]
Length = 248
Score = 206 bits (524), Expect = 2e-51, Method: Composition-based stats.
Identities = 55/227 (24%), Positives = 106/227 (46%), Gaps = 4/227 (1%)
Query: 6 LAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS 65
L D+S++ ++ + VKC++ L + S+++W++ KSV F T + + + +
Sbjct: 5 LMQTDLSVWGMYQHADIVVKCVMIGLILASVVTWAIFFSKSVEFFTQKLRLKREQLQLAD 64
Query: 66 GQSLETVCKSLKNHHNIGL-AAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARE 124
+SL+ L A + A +E + S +G+ GI++R ++ +A
Sbjct: 65 ARSLDQASDIAAGFSAKSLSAQLINEAQNELELS--QGSEDNEGIKERTGFRLERRVAAV 122
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISIL 183
+ +L ++ + VG+ G V G+M F IA + N+ V PGI E+L++
Sbjct: 123 GRYMGRGNGYLATIGAISPFVGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGIAEALLATA 182
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
+GL +IP+ + YN F + + A + + SR + N S
Sbjct: 183 IGLVAAIPAVVIYNIFARQIGSYKATLGDVAAQVLLLQSRDLDLNAS 229
>gi|24114312|ref|NP_708822.1| biopolymer transport protein ExbB [Shigella flexneri 2a str. 301]
gi|30064360|ref|NP_838531.1| biopolymer transport protein ExbB [Shigella flexneri 2a str. 2457T]
gi|24053470|gb|AAN44529.1| enterochelin transporter (uptake) [Shigella flexneri 2a str. 301]
gi|30042617|gb|AAP18341.1| enterochelin transporter (uptake) [Shigella flexneri 2a str. 2457T]
gi|281602396|gb|ADA75380.1| Biopolymer transport protein exbB [Shigella flexneri 2002017]
Length = 244
Score = 206 bits (524), Expect = 2e-51, Method: Composition-based stats.
Identities = 56/227 (24%), Positives = 109/227 (48%), Gaps = 4/227 (1%)
Query: 6 LAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS 65
L D+S++ ++ + VKC++ L + S+++W++ KSV F +R+ + +QL
Sbjct: 5 LMQTDLSVWGMYQYADIVVKCVMIGLILASVVTWAIFFSKSVEFFNQKRRLKREQQLLAE 64
Query: 66 GQSLETVCKSLKNHHNIGLA-AIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARE 124
+SL + + L+ + A +E + S +G+ GI++R ++ +A
Sbjct: 65 ARSLNQANDIAADFGSKSLSLHLLNEAQNELELS--EGSDDNEGIKERTSFRLERRVAAV 122
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISIL 183
++ +L ++ + VG+ G V G+M F IA + N+ V PGI E+L++
Sbjct: 123 GRQMGRGNGYLATIGAISPFVGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGIAEALLATA 182
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
+GL +IP+ + YN F F + A + + SR + S
Sbjct: 183 IGLVAAIPAVVIYNVFARQIGGFKAMLGDVAAQVLLLQSRDLDLEAS 229
>gi|50085689|ref|YP_047199.1| group A colicins tolerance protein [Acinetobacter sp. ADP1]
gi|49531665|emb|CAG69377.1| tolerance to group A colicins, single-stranded DNA filamentous
phage, required for OM integrity [Acinetobacter sp.
ADP1]
Length = 232
Score = 206 bits (524), Expect = 2e-51, Method: Composition-based stats.
Identities = 64/220 (29%), Positives = 114/220 (51%), Gaps = 3/220 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+ I L +Q V+ ++ +L + SI SW +I + +++ +Q F+++FWSG L
Sbjct: 9 LHISDLILQASPVVQAVMLILLLASIYSWYLIAKLHLSYKKSAQQDEHFQKMFWSGAELN 68
Query: 71 TVCKSLK-NHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
T+ + + N GL IF + E+ K + A S I + +R++ V ++R+ ++
Sbjct: 69 TLYNNAQLNSKRTGLEDIFYHGLGEFFKLKKRQATSTQTI-EGTERILRVGLSRDQSQLE 127
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCV 188
+ L L S+ S VG+ G V G+M F +A + ++ PGI E+LI+ +GL
Sbjct: 128 QGLGTLASIGSVAPYVGLFGTVWGIMNAFIGLAAVDQVTLATVAPGIAEALIATAIGLFA 187
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
+IP+ +A+N F + FA E A+L RQ+ G+
Sbjct: 188 AIPAVLAFNHFTSKGEAIYSDRALFAEEMVALLQRQSVGS 227
>gi|71901738|ref|ZP_00683810.1| MotA/TolQ/ExbB proton channel [Xylella fastidiosa Ann-1]
gi|71728510|gb|EAO30669.1| MotA/TolQ/ExbB proton channel [Xylella fastidiosa Ann-1]
Length = 257
Score = 206 bits (524), Expect = 2e-51, Method: Composition-based stats.
Identities = 69/225 (30%), Positives = 112/225 (49%), Gaps = 4/225 (1%)
Query: 5 GLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFW 64
G I+ L ++ + VK I+ LL + S SW +I +K+ F R+ +FE FW
Sbjct: 29 GTTHGGINYIDLMLKASIPVKIIVLLLLLGSFTSWLIIFRKARVFKQANREADQFENRFW 88
Query: 65 SGQSLETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIA 122
SG L + S + + GL AIF E+ + ++ P + R+M
Sbjct: 89 SGTDLSKLYASTNSRKHMVSGLEAIFEGGFREFTRLRERRRLDPRIQIEGAQRVMRTNFM 148
Query: 123 RELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLI 180
RE++++ L L ++ S VG++G V G+M + +G + PGI E+L
Sbjct: 149 REMDQLERNLELLANIGSTAPYVGLVGTVFGIMVTMHDMISSGDQAGIAAVAPGISEALF 208
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+ +GL V+IP+ AYN+F ++ +++ E FA EFSAIL RQ
Sbjct: 209 ATAVGLFVAIPAVWAYNRFTTRLERLSVRYETFAEEFSAILQRQV 253
>gi|293394345|ref|ZP_06638645.1| TonB system transporter ExbB [Serratia odorifera DSM 4582]
gi|291423323|gb|EFE96552.1| TonB system transporter ExbB [Serratia odorifera DSM 4582]
Length = 317
Score = 206 bits (524), Expect = 2e-51, Method: Composition-based stats.
Identities = 52/211 (24%), Positives = 101/211 (47%), Gaps = 4/211 (1%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
MD+S++ ++ + VK ++ L + SI++W+++ K +R+ R Q +S
Sbjct: 81 MDLSVWGMYQHADVVVKTVMIGLVLASIITWTILFAKGSELTRAKRRLRREHQALSEARS 140
Query: 69 LETVCKSLKNHHNIGLAA-IFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
L+ + ++ N ++A + A +E + S + GI++R + +A +
Sbjct: 141 LDEATEMAQSFQNDSISATLLNDAQNELELSAESN--DNNGIKERAGFRFERRVAAYGRQ 198
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
+ + FL ++ + VG+ G V G+M F IA + N+ V PGI E+L++ LGL
Sbjct: 199 LGKGNGFLATIGAISPFVGLFGTVWGIMNSFIGIAHSQTTNLAVVAPGIAEALLATALGL 258
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEF 217
+IP+ + YN F Q+ A +
Sbjct: 259 VAAIPAVVIYNIFARVIGGHRAQVGDVAAQV 289
>gi|298484814|ref|ZP_07002914.1| MotA/TolQ/ExbB proton channel family protein [Pseudomonas
savastanoi pv. savastanoi NCPPB 3335]
gi|298160668|gb|EFI01689.1| MotA/TolQ/ExbB proton channel family protein [Pseudomonas
savastanoi pv. savastanoi NCPPB 3335]
Length = 317
Score = 206 bits (524), Expect = 2e-51, Method: Composition-based stats.
Identities = 55/226 (24%), Positives = 105/226 (46%), Gaps = 5/226 (2%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N+ G+A D+S + ++ + VK ++ L I SI++W++ I K + +R+ R
Sbjct: 77 NSLGMA-HDLSPWGMYQNADVVVKAVMIGLAIASIITWTIWISKGFELLGAKRRLRGEIV 135
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
+SL + + + A+ E + S +R GI++R+ ++ +
Sbjct: 136 NLKKARSLNEASSTASKEGTLA-HLLVHDALEEMRLSA--NSREREGIKERVSFRLERLV 192
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLI 180
A ++ L ++ S VG+ G V G+M F IA + N+ V PGI E+L+
Sbjct: 193 AACGRNMSMGTGVLATIGSTAPFVGLFGTVWGIMNSFIGIAKTQTTNLAVVAPGIAEALL 252
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+ LGL +IP+ + YN F + Q+ + + ++SR +
Sbjct: 253 ATALGLVAAIPAVVIYNVFARSIAGYKAQVSDASAQVLLLVSRDLD 298
>gi|255320818|ref|ZP_05361993.1| protein TolQ [Acinetobacter radioresistens SK82]
gi|262379407|ref|ZP_06072563.1| TolQ [Acinetobacter radioresistens SH164]
gi|255302195|gb|EET81437.1| protein TolQ [Acinetobacter radioresistens SK82]
gi|262298864|gb|EEY86777.1| TolQ [Acinetobacter radioresistens SH164]
Length = 232
Score = 205 bits (523), Expect = 3e-51, Method: Composition-based stats.
Identities = 61/219 (27%), Positives = 111/219 (50%), Gaps = 3/219 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+ I L +Q V+ ++ +L + SI SW +I + ++ ++ F+++FWSG L
Sbjct: 9 LHISDLILQASPVVQLVMLILLLASIYSWYLIAKLYMSHKKAQKDDEHFQKMFWSGAELN 68
Query: 71 TVCKSLK-NHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
T+ + + N GL IF + E+ K + A + I + +R++ V ++R+ +
Sbjct: 69 TLYNNAQLNSKRSGLEDIFYQGLGEFFKLNKRHASTTQSI-EGTERILRVGLSRDQGNLE 127
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCV 188
+ L L S+ S +G+ G V G+M F +A + ++ PGI E+LI+ +GL
Sbjct: 128 QGLGALASIGSVAPYIGLFGTVWGIMNAFIGLAAVDQVTLATVAPGIAEALIATAIGLFA 187
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEG 227
+IP+ +A+N F + FA E A+L RQ+ G
Sbjct: 188 AIPAVLAFNHFTAKGEALYSDRALFAEEMVALLQRQSVG 226
>gi|293609861|ref|ZP_06692163.1| hypothetical protein HMPREF0013_02011 [Acinetobacter sp. SH024]
gi|292828313|gb|EFF86676.1| hypothetical protein HMPREF0013_02011 [Acinetobacter sp. SH024]
Length = 232
Score = 205 bits (523), Expect = 3e-51, Method: Composition-based stats.
Identities = 63/220 (28%), Positives = 112/220 (50%), Gaps = 3/220 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+ I L +Q V+ ++ +L + SI SW +I + +++ + F+++FWSG L
Sbjct: 9 LHISDLILQASPVVQLVMLILLLASIFSWYLIAKLHMSYKKAHQDDEHFQKMFWSGAELS 68
Query: 71 TVCKSLK-NHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
T+ + + N GL IF +SE+ K + A I + +R++ V ++R+ +
Sbjct: 69 TLYNNAQLNSKRSGLEDIFYQGLSEFFKLKKRQAPVSQTI-EGTERILHVGLSRDQSHLE 127
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCV 188
L L S+ S +G+ G V G+M F +A + ++ PGI E+LI+ +GL
Sbjct: 128 YGLGTLASIGSVAPYIGLFGTVWGIMNAFIGLAAVDQVTLATVAPGIAEALIATAIGLFA 187
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
+IP+ +A+N F S+ FA E A+L RQ+ G+
Sbjct: 188 AIPAVLAFNHFTAKSESVYSDRALFAEEMIALLQRQSVGS 227
>gi|330964243|gb|EGH64503.1| TonB system transport protein ExbB [Pseudomonas syringae pv.
actinidiae str. M302091]
Length = 318
Score = 205 bits (523), Expect = 3e-51, Method: Composition-based stats.
Identities = 55/226 (24%), Positives = 104/226 (46%), Gaps = 5/226 (2%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N+ G+A D+S + ++ + VK ++ L I SI++W++ I K + +R+ R
Sbjct: 78 NSLGMA-HDLSPWGMYQNADIVVKIVMIGLAIASIITWTIWISKGFELLGAKRRLRGEIV 136
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
+SL + + + A+ E + S +R GI++R+ ++ +
Sbjct: 137 NLKKARSLTEASATASKEGTLA-HLLVHDALEEMRLSA--NSREREGIKERVSFRLERLV 193
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLI 180
A ++ L ++ S VG+ G V G+M F IA + N+ V PGI E+L+
Sbjct: 194 AACGRNMSMGTGVLATIGSTAPFVGLFGTVWGIMNSFIGIAKTQTTNLAVVAPGIAEALL 253
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+ LGL +IP+ + YN F + Q+ + ++SR +
Sbjct: 254 ATALGLVAAIPAVVIYNVFARSIAGYKAQVSDASAHVLLLVSRDLD 299
>gi|22127369|ref|NP_670792.1| TonB complex protein [Yersinia pestis KIM 10]
gi|45442759|ref|NP_994298.1| TonB complex protein [Yersinia pestis biovar Microtus str. 91001]
gi|21960454|gb|AAM87043.1|AE013952_10 TonB complex protein [Yersinia pestis KIM 10]
gi|45437625|gb|AAS63175.1| TonB complex protein [Yersinia pestis biovar Microtus str. 91001]
Length = 353
Score = 205 bits (523), Expect = 3e-51, Method: Composition-based stats.
Identities = 48/212 (22%), Positives = 103/212 (48%), Gaps = 4/212 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
MD+S++ ++ + VK ++ L + SI++W+++ K RR+ R+ ++ +
Sbjct: 116 AMDLSVWGMYQNADVVVKGVMIGLVLASIVTWTILFSKGTELFRARRRLRQEHEVIGAVT 175
Query: 68 SLETVCKSLKNHHNIGLAA-IFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
L+T + ++ +++ + A++E + + GI++R ++ +A
Sbjct: 176 DLDTASERAEDFGQGSVSSLLLHEALNE--RLLSIESNDNNGIKERTAFRLERRVAAIGR 233
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVS-IPGIIESLISILLG 185
++ + FL ++ + VG+ G V G+M F IA + N+ PGI E+L++ LG
Sbjct: 234 QMGKGNGFLATIGAISPFVGLFGTVWGIMNSFIGIAHSQTTNLAVIAPGIAEALLATALG 293
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEF 217
L +IP+ + YN F + Q+ A +
Sbjct: 294 LVAAIPAVVIYNIFARQIGNYRAQVGDVAAQV 325
>gi|292900653|ref|YP_003540022.1| biopolymer transport protein [Erwinia amylovora ATCC 49946]
gi|291200501|emb|CBJ47630.1| biopolymer transport protein [Erwinia amylovora ATCC 49946]
Length = 244
Score = 205 bits (523), Expect = 3e-51, Method: Composition-based stats.
Identities = 51/226 (22%), Positives = 102/226 (45%), Gaps = 2/226 (0%)
Query: 6 LAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS 65
L MD+S++ ++ + VK ++ L + S+ +W++ KS+ + R++ + + +
Sbjct: 5 LMQMDLSVWGMYQHADIVVKAVMIGLLLASVATWAIFFSKSIELRSARKRLKREQLSLAA 64
Query: 66 GQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
+SLE + L+ + + +E + + GI++R ++ +A
Sbjct: 65 ARSLEEALQIGGGFQRQSLSTLLVKE-AENELELSANSDDNNGIKERTAFRLERQVAAIG 123
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILL 184
FL ++ S VG+ G V G+M F IA + N+ V PGI E+L++ +
Sbjct: 124 RHAGRGNGFLATIGSIAPFVGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGIAEALLATAI 183
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
GL +IP+ + YN F + + A + + SR + S
Sbjct: 184 GLVAAIPAVVIYNVFARTIASYKASLGDVAAQVLLLQSRDLDLAAS 229
>gi|71735527|ref|YP_275169.1| tolQ protein [Pseudomonas syringae pv. phaseolicola 1448A]
gi|71556080|gb|AAZ35291.1| tolQ protein [Pseudomonas syringae pv. phaseolicola 1448A]
gi|320323664|gb|EFW79748.1| tolQ protein [Pseudomonas syringae pv. glycinea str. B076]
gi|320328302|gb|EFW84306.1| tolQ protein [Pseudomonas syringae pv. glycinea str. race 4]
gi|330878529|gb|EGH12678.1| tolQ protein [Pseudomonas syringae pv. glycinea str. race 4]
gi|330889788|gb|EGH22449.1| tolQ protein [Pseudomonas syringae pv. mori str. 301020]
Length = 236
Score = 205 bits (523), Expect = 3e-51, Method: Composition-based stats.
Identities = 57/220 (25%), Positives = 108/220 (49%), Gaps = 3/220 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
++I+ L L VK ++ +L + S++SW +IIQ+S+ R F+Q F + L
Sbjct: 8 MTIWGLISDASLLVKAVMLILLLASLVSWYLIIQRSLALGHYERTLDAFQQRFRAEAELA 67
Query: 71 TVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ ++ G+ +F + +E+ + + P + ++R + VAI+ + ++
Sbjct: 68 PLYAESRSAQEGADGIERVFNAGYAEYVQLKPRPGIEPDVVLSGVERALQVAISEQELQL 127
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
+ L FL ++ S +G+ G V G+M F ++ + PGI E+LI+ +GL
Sbjct: 128 EKGLQFLATVGSVSPYIGLFGTVWGIMNSFIGLSQVQQATLSTVAPGIAEALIATAIGLF 187
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEG 227
+IP+ IAYN+F + + F NE L+R +G
Sbjct: 188 AAIPAVIAYNRFAARGQTLTARYYSFGNELQVRLNRTLQG 227
>gi|332286929|ref|YP_004418840.1| putative TolQ-like translocation protein [Pusillimonas sp. T7-7]
gi|330430882|gb|AEC22216.1| putative TolQ-like translocation protein [Pusillimonas sp. T7-7]
Length = 224
Score = 205 bits (523), Expect = 3e-51, Method: Composition-based stats.
Identities = 62/210 (29%), Positives = 105/210 (50%), Gaps = 4/210 (1%)
Query: 20 MGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNH 79
+ V+ ++ +L SILSW+ I K Q R FE FW+G L + +++
Sbjct: 16 ASVPVQFVMLVLLGISILSWAYIFSKRAALKRANEQTRRFEDDFWAGGDLSVLQQAIATR 75
Query: 80 HN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGS 137
LA IF + M+E+ K+ + + + + D R M RE++ + L+FL S
Sbjct: 76 RAEHGALARIFDAGMTEFIKAR-RNSSNGDAVLDGPRRAMRATYQREMDSLESHLNFLAS 134
Query: 138 MSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAY 196
S +G+LG V G+M F ++ + PGI E+LI+ +GL +IP+ IAY
Sbjct: 135 AGSVSPYIGLLGTVWGIMHAFIGLSSMQQATLSAVAPGIAEALIATAIGLFAAIPAVIAY 194
Query: 197 NKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
N++ + + +++ + F +EF IL RQ
Sbjct: 195 NRYTNEIDRLSIRFDSFIDEFLNILQRQVR 224
>gi|332344963|gb|AEE58297.1| tonB-system energizer ExbB [Escherichia coli UMNK88]
Length = 239
Score = 205 bits (523), Expect = 4e-51, Method: Composition-based stats.
Identities = 55/224 (24%), Positives = 108/224 (48%), Gaps = 4/224 (1%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
D+S++ ++ + VKC++ L + S+++W++ KSV F +R+ + +QL +S
Sbjct: 3 TDLSVWGMYQHADIVVKCVMIGLILASVVTWAIFFSKSVEFFNQKRRLKREQQLLAEARS 62
Query: 69 LETVCKSLKNHHNIGLA-AIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
L + + L+ + A +E + S +G+ GI++R ++ +A +
Sbjct: 63 LNLANDIAADFGSKSLSLHLLNEAQNELELS--EGSDDNEGIKERTSFRLERRVAAVGRQ 120
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
+ +L ++ + VG+ G V G+M F IA + N+ V PGI E+L++ +GL
Sbjct: 121 MGRGNGYLATIGAISPFVGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGIAEALLATAIGL 180
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
+IP+ + YN F F + A + + SR + S
Sbjct: 181 VAAIPAVVIYNVFARQIGGFKAMLGDVAAQVLLLQSRDLDLEAS 224
>gi|209520630|ref|ZP_03269383.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. H160]
gi|209498913|gb|EDZ99015.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. H160]
Length = 243
Score = 205 bits (522), Expect = 4e-51, Method: Composition-based stats.
Identities = 57/228 (25%), Positives = 98/228 (42%), Gaps = 14/228 (6%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
M NYGLA ++ Q + I L + S++SWSVI+ K N + L+R + E
Sbjct: 1 MQNYGLA-------HVWAQGDFVTRGIALALLLMSVMSWSVIVVKGWNVMRLKRLTKNAE 53
Query: 61 QLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRID------ 114
Q FW L K L F++ +++ D ++ + DR+D
Sbjct: 54 QAFWHSDDLADGVKKLGGGAPTPHDNPFVALALSGQEAADHHHQTQPHLHDRMDVSDWIT 113
Query: 115 RMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG 174
R + + + + L+ L S+ S VG+ G V G+ +I +++ + G
Sbjct: 114 RCLKDTMDESVARMQSGLAILASIGSTAPFVGLFGTVWGIYHALLAIGASSQSSIDQVAG 173
Query: 175 -IIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+ E+LI GL V+IP+ + YN +K ++ FA+ A
Sbjct: 174 PVGEALIMTAFGLFVAIPAVLGYNALTRANKAIVAKLSRFAHGLHAFF 221
>gi|28867309|ref|NP_789928.1| TonB system transport protein ExbB [Pseudomonas syringae pv. tomato
str. DC3000]
gi|213970702|ref|ZP_03398827.1| TonB system transport protein ExbB [Pseudomonas syringae pv. tomato
T1]
gi|301382589|ref|ZP_07231007.1| TonB system transport protein ExbB [Pseudomonas syringae pv. tomato
Max13]
gi|302063044|ref|ZP_07254585.1| TonB system transport protein ExbB [Pseudomonas syringae pv. tomato
K40]
gi|302133608|ref|ZP_07259598.1| TonB system transport protein ExbB [Pseudomonas syringae pv. tomato
NCPPB 1108]
gi|28850543|gb|AAO53623.1| TonB system transport protein ExbB [Pseudomonas syringae pv. tomato
str. DC3000]
gi|213924536|gb|EEB58106.1| TonB system transport protein ExbB [Pseudomonas syringae pv. tomato
T1]
Length = 318
Score = 205 bits (522), Expect = 4e-51, Method: Composition-based stats.
Identities = 55/226 (24%), Positives = 104/226 (46%), Gaps = 5/226 (2%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N+ G+A D+S + ++ + VK ++ L I SI++W++ I K + +R+ R
Sbjct: 78 NSLGMA-HDLSPWGMYQNADIVVKIVMIGLAIASIITWTIWISKGFELLGAKRRLRGEIV 136
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
+SL + + + A+ E + S +R GI++R+ ++ +
Sbjct: 137 NLKKARSLTEASATASKEGTLA-HLLVHDALEEMRLSA--NSREREGIKERVSFRLERLV 193
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLI 180
A ++ L ++ S VG+ G V G+M F IA + N+ V PGI E+L+
Sbjct: 194 AACGRNMSMGTGVLATIGSTAPFVGLFGTVWGIMNSFIGIAKTQTTNLAVVAPGIAEALL 253
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+ LGL +IP+ + YN F + Q+ + ++SR +
Sbjct: 254 ATALGLVAAIPAVVIYNVFARSIAGYKAQVSDASAHVLLLVSRDLD 299
>gi|332290103|ref|YP_004420955.1| colicin uptake protein TolQ [Gallibacterium anatis UMN179]
gi|330432999|gb|AEC18058.1| colicin uptake protein TolQ [Gallibacterium anatis UMN179]
Length = 229
Score = 205 bits (522), Expect = 4e-51, Method: Composition-based stats.
Identities = 66/224 (29%), Positives = 118/224 (52%), Gaps = 3/224 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
+ +++ F LF++ + V+ +I++L +FSI+SW++IIQ+S +Q FE+ FWSG+
Sbjct: 1 MSELNFFDLFLKASVVVQIVISILILFSIISWAIIIQRSKILSKALKQSMTFEERFWSGE 60
Query: 68 SLETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
L + + L N + G IF E+ + + I R M +A+ RE+
Sbjct: 61 DLTKLYEGLSNRRDGLSGSEQIFFVGFKEFSRLKQANPNASESIIQGSSRAMHLAMNREI 120
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILL 184
E++ + FL +++S +G+ G V G+M F +++ + + PGI E+LI+ +
Sbjct: 121 EDVENTVPFLATVASVSPYIGLFGTVWGIMHAFMALSNVKQATLQMVAPGIAEALIATAI 180
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
GL +IP+ +AYN+ K F +EF+ IL R+ G
Sbjct: 181 GLFAAIPAVMAYNRLSLRVNKLEQNYANFIDEFTTILHRKVFGQ 224
>gi|170022923|ref|YP_001719428.1| tonB-system energizer ExbB [Yersinia pseudotuberculosis YPIII]
gi|169749457|gb|ACA66975.1| tonB-system energizer ExbB [Yersinia pseudotuberculosis YPIII]
Length = 345
Score = 205 bits (522), Expect = 4e-51, Method: Composition-based stats.
Identities = 49/212 (23%), Positives = 104/212 (49%), Gaps = 4/212 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
MD+S++ ++ + VK ++ L + SI++W+++ K RR+ R+ ++ +
Sbjct: 108 AMDLSVWGMYQNADVVVKGVMIGLVLASIVTWTILFSKGTELFRARRRLRQEHEVIGAVT 167
Query: 68 SLETVCKSLKNHHNIGLAA-IFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
L+T + ++ +++ + A++E + + GI++R ++ +A
Sbjct: 168 DLDTASERAEDFGQGSVSSLLLREALNE--RLLSIESNDNNGIKERTAFRLERRVAAIGR 225
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLG 185
++ + FL ++ + VG+ G V G+M F IA + N+ V PGI E+L++ LG
Sbjct: 226 QMGKGNGFLATIGAISPFVGLFGTVWGIMNSFIGIAHSQTTNLAVVAPGIAEALLATALG 285
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEF 217
L +IP+ + YN F + Q+ A +
Sbjct: 286 LVAAIPAVVIYNIFARQIGNYRAQVGDVAAQV 317
>gi|330876516|gb|EGH10665.1| TonB system transport protein ExbB [Pseudomonas syringae pv.
morsprunorum str. M302280PT]
gi|331018570|gb|EGH98626.1| TonB system transport protein ExbB [Pseudomonas syringae pv.
lachrymans str. M302278PT]
Length = 318
Score = 205 bits (522), Expect = 4e-51, Method: Composition-based stats.
Identities = 55/226 (24%), Positives = 104/226 (46%), Gaps = 5/226 (2%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N+ G+A D+S + ++ + VK ++ L I SI++W++ I K + +R+ R
Sbjct: 78 NSLGMA-HDLSPWGMYQNADIVVKIVMIGLAIASIITWTIWISKGFELLGAKRRLRGEIV 136
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
+SL + + + A+ E + S +R GI++R+ ++ +
Sbjct: 137 NLKKARSLTEASATASKEGTLA-HLLVHDALEEMRLSA--NSREREGIKERVSFRLERLV 193
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLI 180
A ++ L ++ S VG+ G V G+M F IA + N+ V PGI E+L+
Sbjct: 194 AACGRNMSMGTGVLATIGSTAPFVGLFGTVWGIMNSFIGIAKTQTTNLAVVAPGIAEALL 253
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+ LGL +IP+ + YN F + Q+ + ++SR +
Sbjct: 254 ATALGLVAAIPAVVIYNVFARSIAGYKAQVSDASAHVLLLVSRDLD 299
>gi|330972214|gb|EGH72280.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. aceris str.
M302273PT]
Length = 320
Score = 205 bits (522), Expect = 4e-51, Method: Composition-based stats.
Identities = 55/226 (24%), Positives = 104/226 (46%), Gaps = 5/226 (2%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N+ G+A D+S + ++ + VK ++ L I SI++W++ I K + +R+ R
Sbjct: 80 NSLGMA-HDLSPWGMYQNADVVVKAVMIGLAIASIITWTIWISKGFELLGAKRRLRGEIA 138
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
+SL + + + A+ E + S +R GI++R+ ++ +
Sbjct: 139 NLKKARSLTEASATASTEGTLA-HLLVHDALEEMRLSA--NSREREGIKERVSFRLERLV 195
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLI 180
A ++ L ++ S VG+ G V G+M F IA + N+ V PGI E+L+
Sbjct: 196 AACGRNMSMGTGVLATIGSTAPFVGLFGTVWGIMNSFIGIAKTQTTNLAVVAPGIAEALL 255
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+ LGL +IP+ + YN F + Q+ + ++SR +
Sbjct: 256 ATALGLVAAIPAVVIYNVFARSIAGYKAQVSDASAHVLLLVSRDLD 301
>gi|186477201|ref|YP_001858671.1| protein TolQ [Burkholderia phymatum STM815]
gi|184193660|gb|ACC71625.1| protein TolQ [Burkholderia phymatum STM815]
Length = 225
Score = 205 bits (522), Expect = 4e-51, Method: Composition-based stats.
Identities = 74/222 (33%), Positives = 115/222 (51%), Gaps = 3/222 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
D+SI +L + L + ++ LL + S++SW+ I +K R Q FE+ FWSG
Sbjct: 4 TQDLSIISLVLNASLLAQAVMALLLLLSLMSWTFIFRKWFAIRRARAQTERFERDFWSGG 63
Query: 68 SLETVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
L+ + +S N+ + L IF S M E+ K +K P I D R M A RE+
Sbjct: 64 DLQALYQSAANNRHTIGALERIFESGMREFLKGKEKRINDPGAILDGARRAMRAAFQREM 123
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV-SIPGIIESLISILL 184
+ + L+FL S+ S +G+ G V G+M F+ +A + PGI E+L + +
Sbjct: 124 DVLEANLAFLASVGSVSPYIGLFGTVWGIMNAFRGLANVQQATLANVAPGIAEALTATAI 183
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
GL +IP+ +AYN++ D + A++ E F EFS IL RQ
Sbjct: 184 GLFAAIPAVVAYNRYAHDIDRLAIRFETFIEEFSNILQRQAH 225
>gi|330814397|ref|YP_004358636.1| motA/TolQ/ExbB proton channel family protein [Candidatus
Pelagibacter sp. IMCC9063]
gi|327487492|gb|AEA81897.1| motA/TolQ/ExbB proton channel family protein [Candidatus
Pelagibacter sp. IMCC9063]
Length = 222
Score = 205 bits (522), Expect = 4e-51, Method: Composition-based stats.
Identities = 75/217 (34%), Positives = 118/217 (54%), Gaps = 6/217 (2%)
Query: 6 LAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS 65
L D SI LFM+ L VK ++ L + SI SW++II K F + ++ E FWS
Sbjct: 11 LGTTDFSILTLFMRADLVVKFVMISLVLASIFSWALIIDKIKIFKKIFKETDIAEDQFWS 70
Query: 66 GQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
+S K + + L +F + M C + +S I +R R+MDVAI +++
Sbjct: 71 SKSAGEFYKKTSSSSDNPLVVVFRAGME-----CVQDHKSKGQIVERTKRVMDVAIDKQI 125
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILL 184
E+ + L+FL ++ S VG+ G V G+M FQSIA + ++ + PGI E+L + L
Sbjct: 126 EKYEKNLTFLATVGSVAPFVGLFGTVWGIMNSFQSIAISRNTSLAIVAPGIAEALFATAL 185
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
GL +IP+ +AYNKF DS+++ ++E F F I+
Sbjct: 186 GLLAAIPAVVAYNKFSSDSRRYTQKLENFTQSFLTII 222
>gi|294502748|ref|YP_003566810.1| MotA/TolQ/ExbB proton channel family protein [Yersinia pestis
Z176003]
gi|294353207|gb|ADE63548.1| MotA/TolQ/ExbB proton channel family protein [Yersinia pestis
Z176003]
Length = 343
Score = 205 bits (522), Expect = 4e-51, Method: Composition-based stats.
Identities = 48/212 (22%), Positives = 103/212 (48%), Gaps = 4/212 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
MD+S++ ++ + VK ++ L + SI++W+++ K RR+ R+ ++ +
Sbjct: 106 AMDLSVWGMYQNADVVVKGVMIGLVLASIVTWTILFSKGTELFRARRRLRQEHEVIGAVT 165
Query: 68 SLETVCKSLKNHHNIGLAA-IFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
L+T + ++ +++ + A++E + + GI++R ++ +A
Sbjct: 166 DLDTASERAEDFGQGSVSSLLLHEALNE--RLLSIESNDNNGIKERTAFRLERRVAAIGR 223
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVS-IPGIIESLISILLG 185
++ + FL ++ + VG+ G V G+M F IA + N+ PGI E+L++ LG
Sbjct: 224 QMGKGNGFLATIGAISPFVGLFGTVWGIMNSFIGIAHSQTTNLAVIAPGIAEALLATALG 283
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEF 217
L +IP+ + YN F + Q+ A +
Sbjct: 284 LVAAIPAVVIYNIFARQIGNYRAQVGDVAAQV 315
>gi|146313054|ref|YP_001178128.1| biopolymer transport protein ExbB [Enterobacter sp. 638]
gi|145319930|gb|ABP62077.1| outer membrane transport energization protein ExbB [Enterobacter
sp. 638]
Length = 238
Score = 205 bits (522), Expect = 4e-51, Method: Composition-based stats.
Identities = 54/224 (24%), Positives = 107/224 (47%), Gaps = 4/224 (1%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
D+S++ ++ + VK ++ L + S+++W++ KSV I+ +R+ + +Q +S
Sbjct: 3 TDLSVWGMYQHADIVVKIVMIGLILASVITWAIFFSKSVELISQKRRLKREQQQLAEARS 62
Query: 69 LETVCKSLKNHHNIGLAAIFM-SAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
L+ H L ++ + A +E + S G+ GI++R ++ +A
Sbjct: 63 LDQANDMTSAFHAKSLTSMLVNEAQNELELSA--GSEDNEGIKERTGFRLERRVAAVGRH 120
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
+ +L ++ + VG+ G V G+M F IA + N+ V PGI E+L++ +GL
Sbjct: 121 MGRGNGYLATIGAISPFVGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGIAEALLATAIGL 180
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
+IP+ + YN F F + A + + SR + + S
Sbjct: 181 IAAIPAVVIYNVFARMIGSFKATLGDVAAQVLLLQSRDLDLSAS 224
>gi|108809101|ref|YP_653017.1| MotA/TolQ/ExbB proton channel family protein [Yersinia pestis
Antiqua]
gi|108810704|ref|YP_646471.1| MotA/TolQ/ExbB proton channel family protein [Yersinia pestis
Nepal516]
gi|150260288|ref|ZP_01917016.1| MotA/TolQ/ExbB proton channel family protein [Yersinia pestis
CA88-4125]
gi|165939887|ref|ZP_02228426.1| tonB-system energizer ExbB [Yersinia pestis biovar Orientalis str.
IP275]
gi|166008741|ref|ZP_02229639.1| tonB-system energizer ExbB [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166212089|ref|ZP_02238124.1| tonB-system energizer ExbB [Yersinia pestis biovar Antiqua str.
B42003004]
gi|167419105|ref|ZP_02310858.1| tonB-system energizer ExbB [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167425209|ref|ZP_02316962.1| tonB-system energizer ExbB [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|167466386|ref|ZP_02331090.1| TonB complex protein [Yersinia pestis FV-1]
gi|229837364|ref|ZP_04457527.1| membrane spanning protein in TonB-ExbB-ExbD complex [Yersinia
pestis Pestoides A]
gi|229840576|ref|ZP_04460735.1| membrane spanning protein in TonB-ExbB-ExbD complex [Yersinia
pestis biovar Orientalis str. PEXU2]
gi|229842874|ref|ZP_04463026.1| membrane spanning protein in TonB-ExbB-ExbD complex [Yersinia
pestis biovar Orientalis str. India 195]
gi|229900902|ref|ZP_04516026.1| membrane spanning protein in TonB-ExbB-ExbD complex [Yersinia
pestis Nepal516]
gi|270487724|ref|ZP_06204798.1| TonB-system energizer ExbB [Yersinia pestis KIM D27]
gi|108774352|gb|ABG16871.1| MotA/TolQ/ExbB proton channel family protein [Yersinia pestis
Nepal516]
gi|108781014|gb|ABG15072.1| MotA/TolQ/ExbB proton channel family protein [Yersinia pestis
Antiqua]
gi|149289696|gb|EDM39773.1| MotA/TolQ/ExbB proton channel family protein [Yersinia pestis
CA88-4125]
gi|165912198|gb|EDR30836.1| tonB-system energizer ExbB [Yersinia pestis biovar Orientalis str.
IP275]
gi|165992080|gb|EDR44381.1| tonB-system energizer ExbB [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166206835|gb|EDR51315.1| tonB-system energizer ExbB [Yersinia pestis biovar Antiqua str.
B42003004]
gi|166963099|gb|EDR59120.1| tonB-system energizer ExbB [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167055972|gb|EDR65753.1| tonB-system energizer ExbB [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|229682241|gb|EEO78333.1| membrane spanning protein in TonB-ExbB-ExbD complex [Yersinia
pestis Nepal516]
gi|229690141|gb|EEO82198.1| membrane spanning protein in TonB-ExbB-ExbD complex [Yersinia
pestis biovar Orientalis str. India 195]
gi|229696942|gb|EEO86989.1| membrane spanning protein in TonB-ExbB-ExbD complex [Yersinia
pestis biovar Orientalis str. PEXU2]
gi|229705487|gb|EEO91497.1| membrane spanning protein in TonB-ExbB-ExbD complex [Yersinia
pestis Pestoides A]
gi|262360780|gb|ACY57501.1| MotA/TolQ/ExbB proton channel family protein [Yersinia pestis
D106004]
gi|262364725|gb|ACY61282.1| MotA/TolQ/ExbB proton channel family protein [Yersinia pestis
D182038]
gi|270336228|gb|EFA47005.1| TonB-system energizer ExbB [Yersinia pestis KIM D27]
Length = 345
Score = 205 bits (522), Expect = 4e-51, Method: Composition-based stats.
Identities = 48/212 (22%), Positives = 103/212 (48%), Gaps = 4/212 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
MD+S++ ++ + VK ++ L + SI++W+++ K RR+ R+ ++ +
Sbjct: 108 AMDLSVWGMYQNADVVVKGVMIGLVLASIVTWTILFSKGTELFRARRRLRQEHEVIGAVT 167
Query: 68 SLETVCKSLKNHHNIGLAA-IFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
L+T + ++ +++ + A++E + + GI++R ++ +A
Sbjct: 168 DLDTASERAEDFGQGSVSSLLLHEALNE--RLLSIESNDNNGIKERTAFRLERRVAAIGR 225
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVS-IPGIIESLISILLG 185
++ + FL ++ + VG+ G V G+M F IA + N+ PGI E+L++ LG
Sbjct: 226 QMGKGNGFLATIGAISPFVGLFGTVWGIMNSFIGIAHSQTTNLAVIAPGIAEALLATALG 285
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEF 217
L +IP+ + YN F + Q+ A +
Sbjct: 286 LVAAIPAVVIYNIFARQIGNYRAQVGDVAAQV 317
>gi|330988188|gb|EGH86291.1| tolQ protein [Pseudomonas syringae pv. lachrymans str. M301315]
Length = 236
Score = 205 bits (522), Expect = 4e-51, Method: Composition-based stats.
Identities = 57/220 (25%), Positives = 108/220 (49%), Gaps = 3/220 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
++I+ L L VK ++ +L + S++SW +IIQ+S+ R F+Q F + L
Sbjct: 8 MTIWGLISDASLLVKAVMLILLLASLVSWYLIIQRSLALGHYERTLDAFQQRFRAEAELA 67
Query: 71 TVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ ++ G+ +F + +E+ + + P + ++R + VAI+ + ++
Sbjct: 68 PLYSDSRSAQEGADGIERVFNAGYAEYVQLKPRPGIEPDVVLSGVERALQVAISEQELQL 127
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
+ L FL ++ S +G+ G V G+M F ++ + PGI E+LI+ +GL
Sbjct: 128 EKGLQFLATVGSVSPYIGLFGTVWGIMNSFIGLSQVQQATLSTVAPGIAEALIATAIGLF 187
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEG 227
+IP+ IAYN+F + + F NE L+R +G
Sbjct: 188 AAIPAVIAYNRFAARGQTLTARYYSFGNELQVRLNRTLQG 227
>gi|330986877|gb|EGH84980.1| TonB system transport protein ExbB1 [Pseudomonas syringae pv.
lachrymans str. M301315]
Length = 317
Score = 205 bits (522), Expect = 4e-51, Method: Composition-based stats.
Identities = 55/226 (24%), Positives = 104/226 (46%), Gaps = 5/226 (2%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N+ G+A D+S + ++ + VK ++ L I SI++W++ I K + +R+ R
Sbjct: 77 NSLGMA-HDLSPWGMYQNADVVVKAVMIGLAIASIITWTIWISKGFELLGAKRRLRGEIV 135
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
+SL + + + A+ E + S +R GI++R+ ++ +
Sbjct: 136 NLKKARSLNEASSTASKEGTLA-HLLVHDALEEMRLSA--NSREREGIKERVSFRLERLV 192
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLI 180
A ++ L ++ S VG+ G V G+M F IA + N+ V PGI E+L+
Sbjct: 193 AACGRNMSMGTGVLATIGSTAPFVGLFGTVWGIMNSFIGIAKTQTTNLAVVAPGIAEALL 252
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+ LGL +IP+ + YN F + Q+ + ++SR +
Sbjct: 253 ATALGLVAAIPAVVIYNVFARSIAGYKAQVSDASAHVLLLVSRDLD 298
>gi|289625454|ref|ZP_06458408.1| TonB system transport protein ExbB1 [Pseudomonas syringae pv.
aesculi str. NCPPB3681]
gi|289646380|ref|ZP_06477723.1| TonB system transport protein ExbB1 [Pseudomonas syringae pv.
aesculi str. 2250]
gi|330866519|gb|EGH01228.1| TonB system transport protein ExbB1 [Pseudomonas syringae pv.
aesculi str. 0893_23]
Length = 317
Score = 205 bits (522), Expect = 4e-51, Method: Composition-based stats.
Identities = 55/226 (24%), Positives = 104/226 (46%), Gaps = 5/226 (2%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N+ G+A D+S + ++ + VK ++ L I SI++W++ I K + +R+ R
Sbjct: 77 NSLGMA-HDLSPWGMYQNADVVVKAVMIGLAIASIITWTIWISKGFELLGAKRRLRGEIV 135
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
+SL + + + A+ E + S +R GI++R+ ++ +
Sbjct: 136 NLKKARSLNEASSTASKEGTLA-HLLVHDALEEMRLSA--NSREREGIKERVSFRLERLV 192
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLI 180
A ++ L ++ S VG+ G V G+M F IA + N+ V PGI E+L+
Sbjct: 193 AACGRNMSMGTGVLATIGSTAPFVGLFGTVWGIMNSFIGIAKTQTTNLAVVAPGIAEALL 252
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+ LGL +IP+ + YN F + Q+ + ++SR +
Sbjct: 253 ATALGLVAAIPAVVIYNVFARSIAGYKAQVSDASAHVLLLVSRDLD 298
>gi|312171024|emb|CBX79283.1| Biopolymer transport exbB protein [Erwinia amylovora ATCC BAA-2158]
Length = 244
Score = 205 bits (522), Expect = 4e-51, Method: Composition-based stats.
Identities = 51/226 (22%), Positives = 102/226 (45%), Gaps = 2/226 (0%)
Query: 6 LAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS 65
L MD+S++ ++ + VK ++ L + S+ +W++ KS+ + R++ + + +
Sbjct: 5 LMQMDLSVWGMYQHADIVVKAVMIGLLLASVATWAIFFSKSIELRSARKRLKREQLSLAA 64
Query: 66 GQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
+SLE + L+ + + +E + + GI++R ++ +A
Sbjct: 65 ARSLEEALQIGGGFQRQSLSTLLVKE-AENELELSANSDDNNGIKERTAFRLERRVAAIG 123
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILL 184
FL ++ S VG+ G V G+M F IA + N+ V PGI E+L++ +
Sbjct: 124 RHAGRGNGFLATIGSIAPFVGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGIAEALLATAI 183
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
GL +IP+ + YN F + + A + + SR + S
Sbjct: 184 GLVAAIPAVVIYNVFARTIASYKASLGDVAAQVLLLQSRDLDLAAS 229
>gi|330890916|gb|EGH23577.1| TonB system transport protein ExbB1 [Pseudomonas syringae pv. mori
str. 301020]
Length = 317
Score = 205 bits (522), Expect = 5e-51, Method: Composition-based stats.
Identities = 56/226 (24%), Positives = 105/226 (46%), Gaps = 5/226 (2%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N+ G+A D+S + ++ + VK ++ L I SI++W++ I K + +R+ R
Sbjct: 77 NSLGMA-HDLSPWGMYQNADVVVKAVMIGLAIASIITWTIWISKGFELLGAKRRLRGEIV 135
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
+SL + + + A+ E + S +R GI++R+ ++ +
Sbjct: 136 NLKKARSLNEASSTASKEGTLA-HLLVHDALEEMRLSA--NSREREGIKERVSFRLERLV 192
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLI 180
A ++ S L ++ S VG+ G V G+M F IA + N+ V PGI E+L+
Sbjct: 193 AACGRNMSMGTSVLATIGSTAPFVGLFGTVWGIMNSFIGIAKTQTTNLAVVAPGIAEALL 252
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+ LGL +IP+ + YN F + Q+ + ++SR +
Sbjct: 253 ATALGLVAAIPAVVIYNVFARSIAGYKAQVSDASAHVLLLVSRDLD 298
>gi|311278071|ref|YP_003940302.1| tonB-system energizer ExbB [Enterobacter cloacae SCF1]
gi|308747266|gb|ADO47018.1| tonB-system energizer ExbB [Enterobacter cloacae SCF1]
Length = 243
Score = 205 bits (522), Expect = 5e-51, Method: Composition-based stats.
Identities = 52/226 (23%), Positives = 102/226 (45%), Gaps = 2/226 (0%)
Query: 6 LAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS 65
L D+S++ ++ + VK ++ L + S+++W++ KS I+ +R+ + +QL
Sbjct: 5 LMQTDLSVWGMYHHADIVVKVVMIGLVLASVVTWAIFFSKSAELISHKRRLKREQQLLGD 64
Query: 66 GQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
+SL L+ +S ++ GA GI++R ++ +A
Sbjct: 65 ARSLNQASDIAGAFEAKSLSRQLISEAQN-ERELSAGAEDYEGIKERTGFRLERRVAAVG 123
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILL 184
+ +L ++ + VG+ G V G+M F IA + N+ V PGI E+L++ +
Sbjct: 124 RHMGRGNGYLATIGAISPFVGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGIAEALLATAI 183
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
GL +IP+ + YN F + + A + + SR + S
Sbjct: 184 GLFAAIPAVVIYNVFARMIGSYKALLGDVAAQVLLLQSRDLDLGAS 229
>gi|241767252|ref|ZP_04764992.1| protein TolQ [Acidovorax delafieldii 2AN]
gi|241362086|gb|EER58205.1| protein TolQ [Acidovorax delafieldii 2AN]
Length = 233
Score = 205 bits (522), Expect = 5e-51, Method: Composition-based stats.
Identities = 74/226 (32%), Positives = 115/226 (50%), Gaps = 3/226 (1%)
Query: 6 LAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS 65
+ D+SI +L + V+ ++ LL S+ SW+ I +K ++ EFE+ FWS
Sbjct: 1 MNSQDMSILSLVLHASWVVQLVMLLLLGVSVASWAAIFRKLFALKRVKNLNEEFERDFWS 60
Query: 66 GQSLETVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAR 123
G SL + S + + IF S M E++K ++ P + D R M + R
Sbjct: 61 GTSLNDLYASAAQNAKNAGPMERIFASGMREYQKLRERRITDPGTLLDGARRAMRASFQR 120
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISI 182
E++ + LSFLGS++S VG+ G V G+M F AG + ++ PGI E+L++
Sbjct: 121 EMDVVESSLSFLGSVASVSPYVGLFGTVWGIMHAFTGFAGMEQVTLATVAPGIAEALVAT 180
Query: 183 LLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
+GL +IP+ IAYN+F D + A E F EFS IL R +
Sbjct: 181 AIGLFAAIPAVIAYNRFARDIDRVATHQETFIEEFSNILQRNLGAH 226
>gi|313648123|gb|EFS12569.1| tonB-system energizer ExbB [Shigella flexneri 2a str. 2457T]
gi|332752681|gb|EGJ83066.1| tonB-system energizer ExbB [Shigella flexneri K-671]
gi|332753066|gb|EGJ83450.1| tonB-system energizer ExbB [Shigella flexneri 4343-70]
gi|332754574|gb|EGJ84940.1| tonB-system energizer ExbB [Shigella flexneri 2747-71]
gi|332765487|gb|EGJ95705.1| tonB-system energizer ExbB [Shigella flexneri 2930-71]
gi|333000327|gb|EGK19910.1| tonB-system energizer ExbB [Shigella flexneri K-218]
gi|333014917|gb|EGK34262.1| tonB-system energizer ExbB [Shigella flexneri K-304]
Length = 239
Score = 205 bits (521), Expect = 5e-51, Method: Composition-based stats.
Identities = 55/224 (24%), Positives = 108/224 (48%), Gaps = 4/224 (1%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
D+S++ ++ + VKC++ L + S+++W++ KSV F +R+ + +QL +S
Sbjct: 3 TDLSVWGMYQYADIVVKCVMIGLILASVVTWAIFFSKSVEFFNQKRRLKREQQLLAEARS 62
Query: 69 LETVCKSLKNHHNIGLA-AIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
L + + L+ + A +E + S +G+ GI++R ++ +A +
Sbjct: 63 LNQANDIAADFGSKSLSLHLLNEAQNELELS--EGSDDNEGIKERTSFRLERRVAAVGRQ 120
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
+ +L ++ + VG+ G V G+M F IA + N+ V PGI E+L++ +GL
Sbjct: 121 MGRGNGYLATIGAISPFVGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGIAEALLATAIGL 180
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
+IP+ + YN F F + A + + SR + S
Sbjct: 181 VAAIPAVVIYNVFARQIGGFKAMLGDVAAQVLLLQSRDLDLEAS 224
>gi|323525501|ref|YP_004227654.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. CCGE1001]
gi|323382503|gb|ADX54594.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. CCGE1001]
Length = 242
Score = 205 bits (521), Expect = 5e-51, Method: Composition-based stats.
Identities = 57/228 (25%), Positives = 98/228 (42%), Gaps = 14/228 (6%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
M NYGLA ++ Q + I L + S++SWSVI+ K N + L R + E
Sbjct: 1 MQNYGLA-------HVWAQGDFVTRGIALALLVMSVMSWSVIVIKGWNVMRLNRLTKNAE 53
Query: 61 QLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRID------ 114
Q FW L K L + F++ +++ D ++ + DR+D
Sbjct: 54 QAFWHSDDLADGVKKLGAGSSTPHDNPFLALALSGQEAADHHHQTQPHLHDRMDVSDWVT 113
Query: 115 RMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG 174
R + + + + L+ L S+ S VG+ G V G+ +I +++ + G
Sbjct: 114 RCLKDTMDESVARMQSGLAILASIGSTAPFVGLFGTVWGIYHALLAIGASGQSSIDQVAG 173
Query: 175 -IIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+ E+LI GL V+IP+ + YN +K ++ FA+ A
Sbjct: 174 PVGEALIMTAFGLFVAIPAVLGYNALTRANKAIVAKLSRFAHGLHAFF 221
>gi|257481748|ref|ZP_05635789.1| TonB system transport protein ExbB1 [Pseudomonas syringae pv.
tabaci ATCC 11528]
Length = 317
Score = 205 bits (521), Expect = 5e-51, Method: Composition-based stats.
Identities = 55/226 (24%), Positives = 104/226 (46%), Gaps = 5/226 (2%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N+ G+A D+S + ++ + VK ++ L I SI++W++ I K + +R+ R
Sbjct: 77 NSLGMA-HDLSPWGMYQNADVVVKAVMIGLAIASIITWTIWISKGFELLGAKRRLRGEIV 135
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
+SL + + + A+ E + S +R GI++R+ ++ +
Sbjct: 136 NLKKARSLNEASSTASKEGTLA-HLLVHDALEEMRLSA--NSREREGIKERVSFRLERLV 192
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLI 180
A ++ L ++ S VG+ G V G+M F IA + N+ V PGI E+L+
Sbjct: 193 AACGRNMSMGTGVLATIGSTAPFVGLFGTVWGIMNSFIGIAKTQTTNLAVVAPGIAEALL 252
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+ LGL +IP+ + YN F + Q+ + ++SR +
Sbjct: 253 ATALGLVAAIPAVVIYNVFARSIAGYKAQVSDASAHVLLLVSRDLD 298
>gi|148550415|ref|YP_001270517.1| TonB-system energizer ExbB type-1 [Pseudomonas putida F1]
gi|148514473|gb|ABQ81333.1| TonB-system energizer ExbB type-1 [Pseudomonas putida F1]
Length = 324
Score = 205 bits (521), Expect = 5e-51, Method: Composition-based stats.
Identities = 53/224 (23%), Positives = 101/224 (45%), Gaps = 4/224 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
D+S + ++ + VK ++ L I SI++W++ I K + +R+ R
Sbjct: 93 AHDLSPWGMYKNADIVVKIVMIGLAIASIITWTIWIAKGFELMGAKRRLRGEIAQLKKST 152
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+L+ + + N + A+ E + S AR GI++R+ ++ +
Sbjct: 153 TLKEASE-VSNKEGTLAHTLVHDALEEMRLST--NAREKEGIKERVSFRLERLVHASGRT 209
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
++ L ++ S VG+ G V G+M F IA + N+ V PGI E+L++ LGL
Sbjct: 210 MSSGTGVLATIGSTAPFVGLFGTVWGIMNSFIGIAKTQTTNLAVVAPGIAEALLATALGL 269
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
+IP+ + YN F + Q+ + + ++SR + S
Sbjct: 270 VAAIPAVVIYNVFARSIAGYKAQVSDASAQVLLLVSRDLDHQGS 313
>gi|170691328|ref|ZP_02882493.1| protein TolQ [Burkholderia graminis C4D1M]
gi|295675615|ref|YP_003604139.1| protein TolQ [Burkholderia sp. CCGE1002]
gi|307728554|ref|YP_003905778.1| protein TolQ [Burkholderia sp. CCGE1003]
gi|323524841|ref|YP_004226994.1| protein TolQ [Burkholderia sp. CCGE1001]
gi|170143533|gb|EDT11696.1| protein TolQ [Burkholderia graminis C4D1M]
gi|295435458|gb|ADG14628.1| protein TolQ [Burkholderia sp. CCGE1002]
gi|307583089|gb|ADN56487.1| protein TolQ [Burkholderia sp. CCGE1003]
gi|323381843|gb|ADX53934.1| protein TolQ [Burkholderia sp. CCGE1001]
Length = 225
Score = 205 bits (521), Expect = 5e-51, Method: Composition-based stats.
Identities = 77/229 (33%), Positives = 117/229 (51%), Gaps = 7/229 (3%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
MN D+SI +L + L + ++ LL + S+LSW+ I +K R Q FE
Sbjct: 1 MNT----TQDLSIVSLVLNASLLAQAVMALLLLLSLLSWTFIFRKWFAIRRARAQTERFE 56
Query: 61 QLFWSGQSLETVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMD 118
+ FWSG L+ + +S N+ + L IF S M E+ K +K P I D R M
Sbjct: 57 RDFWSGGDLQALYQSAANNRHTIGALERIFESGMREFLKGKEKRLNDPGAILDGARRAMR 116
Query: 119 VAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV-SIPGIIE 177
A RE++ + L+FL S+ S +G+ G V G+M F+ +A + PGI E
Sbjct: 117 AAFQREMDVLEANLAFLASVGSVSPYIGLFGTVWGIMNAFRGLANVQQATLANVAPGIAE 176
Query: 178 SLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+L + +GL +IP+ +AYN++ D + A++ E F EFS IL RQ
Sbjct: 177 ALTATAIGLFAAIPAVVAYNRYAHDIDRLAIRFETFIEEFSNILQRQAH 225
>gi|62181671|ref|YP_218088.1| biopolymer transport protein ExbB [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SC-B67]
gi|62129304|gb|AAX67007.1| uptake of enterochelin; tonB-dependent uptake of B colicins
[Salmonella enterica subsp. enterica serovar
Choleraesuis str. SC-B67]
gi|322716155|gb|EFZ07726.1| biopolymer transport protein ExbB [Salmonella enterica subsp.
enterica serovar Choleraesuis str. A50]
Length = 243
Score = 205 bits (521), Expect = 5e-51, Method: Composition-based stats.
Identities = 54/224 (24%), Positives = 105/224 (46%), Gaps = 4/224 (1%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
D+S++ ++ + VKC++ L + S+++W++ KSV F T + + + + +S
Sbjct: 3 TDLSVWGMYQHADIVVKCVMIGLILASVVTWAIFFSKSVEFFTQKLRLKREQLQLADARS 62
Query: 69 LETVCKSLKNHHNIGL-AAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
L+ L A + A +E + S +G+ GI++R ++ +A
Sbjct: 63 LDQASDIAAGFSAKSLSAQLINEAQNELELS--QGSEDNEGIKERTGFRLERRVAAIGRY 120
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
+ +L ++ + VG+ G V G+M F IA + N+ V PGI E+L++ +GL
Sbjct: 121 MGRGNGYLATIGAISPFVGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGIAEALLATAIGL 180
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
+IP+ + YN F + + A + + SR + N S
Sbjct: 181 VAAIPAVVIYNIFARQIGSYKATLGDVAAQVLLLQSRDLDLNAS 224
>gi|66043475|ref|YP_233316.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. syringae
B728a]
gi|63254182|gb|AAY35278.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. syringae
B728a]
Length = 320
Score = 205 bits (521), Expect = 5e-51, Method: Composition-based stats.
Identities = 55/226 (24%), Positives = 104/226 (46%), Gaps = 5/226 (2%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N+ G+A D+S + ++ + VK ++ L I SI++W++ I K + +R+ R
Sbjct: 80 NSLGMA-HDLSPWGMYQNADVVVKAVMIGLAIASIMTWTIWISKGFELLGAKRRLRGEIA 138
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
+SL + + + A+ E + S +R GI++R+ ++ +
Sbjct: 139 NLKKARSLTEASATASTEGTLA-HLLVHDALEEMRLSA--NSREREGIKERVSFRLERLV 195
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLI 180
A ++ L ++ S VG+ G V G+M F IA + N+ V PGI E+L+
Sbjct: 196 AACGRNMSMGTGVLATIGSTAPFVGLFGTVWGIMNSFIGIAKTQTTNLAVVAPGIAEALL 255
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+ LGL +IP+ + YN F + Q+ + ++SR +
Sbjct: 256 ATALGLVAAIPAVVIYNVFARSIAGYKAQVSDASAHVLLLVSRDLD 301
>gi|170719354|ref|YP_001747042.1| tonB-system energizer ExbB [Pseudomonas putida W619]
gi|169757357|gb|ACA70673.1| tonB-system energizer ExbB [Pseudomonas putida W619]
Length = 323
Score = 205 bits (521), Expect = 5e-51, Method: Composition-based stats.
Identities = 53/220 (24%), Positives = 100/220 (45%), Gaps = 4/220 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
D+S + ++ + VK ++ L I SI++W++ I K + +R+ R
Sbjct: 92 AHDLSPWGMYKNADVVVKAVMIGLAIASIITWTIWIAKGFELMGAKRRLRGEIAQLKKSA 151
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
SL+ + + N + A+ E + S AR GI++R+ ++ +
Sbjct: 152 SLKEASE-VSNKEGTLAHTLVHDALEEMRLSA--NAREKEGIKERVSFRLERLVHASGRN 208
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
++ L ++ S VG+ G V G+M F IA + N+ V PGI E+L++ LGL
Sbjct: 209 MSSGTGVLATIGSTAPFVGLFGTVWGIMNSFIGIAKTQTTNLAVVAPGIAEALLATALGL 268
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ + YN F + Q+ + + ++SR +
Sbjct: 269 VAAIPAVVIYNVFARSIAGYKAQVSDASAQVLLLVSRDLD 308
>gi|320016755|gb|ADW00327.1| membrane spanning protein in TonB-ExbB-ExbD complex [Yersinia
pestis biovar Medievalis str. Harbin 35]
Length = 345
Score = 205 bits (521), Expect = 6e-51, Method: Composition-based stats.
Identities = 47/212 (22%), Positives = 102/212 (48%), Gaps = 4/212 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
MD+S++ ++ + VK ++ L + SI++W+++ K RR+ R+ ++ +
Sbjct: 108 AMDLSVWGMYQNADVVVKGVMIGLVLASIVTWTILFSKGTELFRARRRLRQEHEVIGAVT 167
Query: 68 SLETVCKSLKNHHNIGLAA-IFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
L+T + ++ +++ + A++E + + GI++R ++ +A
Sbjct: 168 DLDTASERAEDFGQGSVSSLLLHEALNE--RLLSIESNDNNGIKERTAFRLERRVAAIGR 225
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVS-IPGIIESLISILLG 185
++ + FL ++ + VG+ G V G+M F I + N+ PGI E+L++ LG
Sbjct: 226 QMGKGNGFLATIGAISPFVGLFGTVWGIMNSFIGITHSQTTNLAVIAPGIAEALLATALG 285
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEF 217
L +IP+ + YN F + Q+ A +
Sbjct: 286 LVAAIPAVVIYNIFARQIGNYRAQVGDVAAQV 317
>gi|297568865|ref|YP_003690209.1| protein TolQ [Desulfurivibrio alkaliphilus AHT2]
gi|296924780|gb|ADH85590.1| protein TolQ [Desulfurivibrio alkaliphilus AHT2]
Length = 234
Score = 205 bits (521), Expect = 6e-51, Method: Composition-based stats.
Identities = 60/222 (27%), Positives = 107/222 (48%), Gaps = 6/222 (2%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
M++++F +F++ G +K +I LL + S+ SW ++ QK + + +R+ EF++ FW ++
Sbjct: 1 MELNVFTMFLEAGPTIKAVILLLLVMSLYSWFIVFQKEILYRKVRQASEEFKEQFWKCRN 60
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARS-----PIGIQDRIDRMMDVAIAR 123
L K+ K A IF +A E +K + + + R A
Sbjct: 61 LAEAHKTAKQAELAPEAMIFRAAYQELQKLNKAQGGELRLEQRLAGMEPLKRAAGKARDG 120
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISI 182
E+ ++ L FL S SA +G+ G V G+M F I S ++ V PGI E+L+
Sbjct: 121 EIAQLASSLPFLASTGSASPFIGLFGTVWGIMTAFHEIGVRGSASLAVVAPGISEALVVT 180
Query: 183 LLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+GL V+IP+ + YN + + + F +F ++ R
Sbjct: 181 AMGLAVAIPAVVFYNYYTNRLAQIEDNSQAFVTDFINLIERD 222
>gi|330862283|emb|CBX72444.1| biopolymer transport protein exbB [Yersinia enterocolitica W22703]
Length = 340
Score = 205 bits (521), Expect = 6e-51, Method: Composition-based stats.
Identities = 49/216 (22%), Positives = 102/216 (47%), Gaps = 3/216 (1%)
Query: 3 NYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQL 62
GLA MD+S++ ++ + VK ++ L + SI++W+++ K RR+ ++ ++
Sbjct: 99 PQGLA-MDLSVWGMYQHADVVVKGVMIGLVLASIVTWTILFSKGTELFRARRRLQQEHEV 157
Query: 63 FWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIA 122
+ L+T + ++ + + ++ + GI++R ++ +A
Sbjct: 158 IGAVTDLDTASERAAAFSPESISGLLLREAQN-ERLLSAESNDNNGIKERTAFRLERRVA 216
Query: 123 RELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLIS 181
++ + FL ++ + VG+ G V G+M F IA + N+ V PGI E+L++
Sbjct: 217 AISRQMGKGNGFLATIGAISPFVGLFGTVWGIMNSFIGIAHSQTTNLAVVAPGIAEALLA 276
Query: 182 ILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEF 217
LGL +IP+ + YN F + Q+ A +
Sbjct: 277 TALGLVAAIPAVVIYNIFARLIGSYRAQVGDVAAQV 312
>gi|296283274|ref|ZP_06861272.1| TolQ, tolQ protein [Citromicrobium bathyomarinum JL354]
Length = 237
Score = 205 bits (521), Expect = 6e-51, Method: Composition-based stats.
Identities = 71/217 (32%), Positives = 120/217 (55%), Gaps = 2/217 (0%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+ LFM + VK ++ L + SI SW +II ++ +++ R+FEQ FW+ ++ E
Sbjct: 20 LEPVKLFMDADIVVKAVMAALLLASIWSWMIIISVAMKIGGAKKRARKFEQDFWASENYE 79
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
+ +N ++ A I A++EWKKS G + G Q RI +MD +A E + +
Sbjct: 80 ETLDAYRNQ-DVAPARIAWGAITEWKKSTKGGVKDVRGAQGRIAAVMDSHVAEEADRMAN 138
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVS 189
+L+FL ++ S VG+ G V G+M F I ++++ V PGI E+L + +GL +
Sbjct: 139 RLTFLATLGSVAPFVGLFGTVWGIMNSFFQIGAQNNSSLAVVAPGISEALFATAIGLFAA 198
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
IP+ IAYN+F ++ ++ FA+ F+A L R+ E
Sbjct: 199 IPAVIAYNRFSASVNRYEAILQRFADRFNANLGRELE 235
>gi|289672859|ref|ZP_06493749.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. syringae
FF5]
gi|330977354|gb|EGH77304.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. aptata str.
DSM 50252]
Length = 317
Score = 205 bits (521), Expect = 6e-51, Method: Composition-based stats.
Identities = 55/226 (24%), Positives = 104/226 (46%), Gaps = 5/226 (2%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N+ G+A D+S + ++ + VK ++ L I SI++W++ I K + +R+ R
Sbjct: 77 NSLGMA-HDLSPWGMYQNADVVVKAVMIGLAIASIITWTIWISKGFELLGAKRRLRGEIA 135
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
+SL + + + A+ E + S +R GI++R+ ++ +
Sbjct: 136 NLKKARSLSEASATASTEGTLA-HLLVHDALEEMRLSA--NSREREGIKERVSFRLERLV 192
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLI 180
A ++ L ++ S VG+ G V G+M F IA + N+ V PGI E+L+
Sbjct: 193 AACGRNMSMGTGVLATIGSTAPFVGLFGTVWGIMNSFIGIAKTQTTNLAVVAPGIAEALL 252
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+ LGL +IP+ + YN F + Q+ + ++SR +
Sbjct: 253 ATALGLVAAIPAVVIYNVFARSIAGYKAQVSDASAHVLLLVSRDLD 298
>gi|331010851|gb|EGH90907.1| tolQ protein [Pseudomonas syringae pv. tabaci ATCC 11528]
Length = 236
Score = 205 bits (521), Expect = 6e-51, Method: Composition-based stats.
Identities = 57/220 (25%), Positives = 106/220 (48%), Gaps = 3/220 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
++I+ L L VK ++ +L + S++SW +IIQ+S+ R F+Q F + L
Sbjct: 8 MTIWGLISDASLLVKAVMLILLLASLVSWYLIIQRSLALGHYERTLDAFQQRFRAEAELA 67
Query: 71 TVCKSL--KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
T+ G+ +F + +E+ + + P + ++R + VAI+ + ++
Sbjct: 68 TLYAESHSAQEGADGIERVFNAGYAEYVQLKPRPGIEPDVVPSGVERALQVAISEQELQL 127
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
+ L FL ++ S +G+ G V G+M F ++ + PGI E+LI+ +GL
Sbjct: 128 EKGLQFLATVGSVSPYIGLFGTVWGIMNSFIGLSQVQQATLSTVAPGIAEALIATAIGLF 187
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEG 227
++P+ IAYN F + + F NE L+R +G
Sbjct: 188 AALPAVIAYNCFAARGQTLTARYYSFGNELQVRLNRTLQG 227
>gi|162419125|ref|YP_001604886.1| tonB-system energizer ExbB [Yersinia pestis Angola]
gi|162351940|gb|ABX85888.1| tonB-system energizer ExbB [Yersinia pestis Angola]
Length = 330
Score = 205 bits (521), Expect = 6e-51, Method: Composition-based stats.
Identities = 48/212 (22%), Positives = 103/212 (48%), Gaps = 4/212 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
MD+S++ ++ + VK ++ L + SI++W+++ K RR+ R+ ++ +
Sbjct: 93 AMDLSVWGMYQNADVVVKGVMIGLVLASIVTWTILFSKGTELFRARRRLRQEHEVIGAVT 152
Query: 68 SLETVCKSLKNHHNIGLAA-IFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
L+T + ++ +++ + A++E + + GI++R ++ +A
Sbjct: 153 DLDTASERAEDFGQGSVSSLLLHEALNE--RLLSIESNDNNGIKERTAFRLERRVAAIGR 210
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVS-IPGIIESLISILLG 185
++ + FL ++ + VG+ G V G+M F IA + N+ PGI E+L++ LG
Sbjct: 211 QMGKGNGFLATIGAISPFVGLFGTVWGIMNSFIGIAHSQTTNLAVIAPGIAEALLATALG 270
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEF 217
L +IP+ + YN F + Q+ A +
Sbjct: 271 LVAAIPAVVIYNIFARQIGNYRAQVGDVAAQV 302
>gi|330952135|gb|EGH52395.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae Cit 7]
Length = 317
Score = 204 bits (520), Expect = 6e-51, Method: Composition-based stats.
Identities = 55/226 (24%), Positives = 104/226 (46%), Gaps = 5/226 (2%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N+ G+A D+S + ++ + VK ++ L I SI++W++ I K + +R+ R
Sbjct: 77 NSLGMA-HDLSPWGMYQNADVVVKAVMIGLAIASIITWTIWISKGFELLGAKRRLRGEIV 135
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
+SL + + + A+ E + S +R GI++R+ ++ +
Sbjct: 136 NLKKARSLTEASATASKEGTLA-HLLVHDALEEMRLSA--NSREREGIKERVSFRLERLV 192
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLI 180
A ++ L ++ S VG+ G V G+M F IA + N+ V PGI E+L+
Sbjct: 193 AACGRNMSMGTGVLATIGSTAPFVGLFGTVWGIMNSFIGIAKTQTTNLAVVAPGIAEALL 252
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+ LGL +IP+ + YN F + Q+ + ++SR +
Sbjct: 253 ATALGLVAAIPAVVIYNVFARSIAGYKAQVSDASAHVLLLVSRDLD 298
>gi|15887516|ref|NP_353197.1| biopolymer transport protein [Agrobacterium tumefaciens str. C58]
gi|15155043|gb|AAK85982.1| biopolymer transport protein [Agrobacterium tumefaciens str. C58]
Length = 340
Score = 204 bits (520), Expect = 6e-51, Method: Composition-based stats.
Identities = 49/221 (22%), Positives = 96/221 (43%), Gaps = 3/221 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
++S + +FM VK ++ L S+++W+V + KS+ R + ++ +
Sbjct: 102 PHNLSPWGMFMAADWVVKGVMIGLAFASLVTWTVWVAKSIELAGARVRAGSTLKVIRRAK 161
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKS-CDKGARSPIGIQDRIDRMMDVAIARELE 126
+L +++N A + A E + S GI++R+ +
Sbjct: 162 TLAEATDAVEN-KGGPAALMLRMATHEMQLSDAVVEHTDGGGIKERVSSALSRIETHAGR 220
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLG 185
++ L ++ S VG+ G V G+M F SI+ + N+ V PGI E+L++ +G
Sbjct: 221 RMSRGTGALATIGSTAPFVGLFGTVWGIMNSFISISESQTTNLAVVAPGIAEALLATAIG 280
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
L +IP+ + YN F + + A ++SR +
Sbjct: 281 LVAAIPAVVIYNVFARSITGYRHLLADAAAGVERLVSRDLD 321
>gi|325518367|gb|EGC98089.1| biopolymer transport protein [Burkholderia sp. TJI49]
Length = 243
Score = 204 bits (520), Expect = 7e-51, Method: Composition-based stats.
Identities = 57/228 (25%), Positives = 96/228 (42%), Gaps = 14/228 (6%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
M +YG+A ++ Q + I L + S+LSW VII K N + L R + E
Sbjct: 1 MQSYGIA-------HVWAQGDFVTRAIAITLLVMSVLSWIVIIVKGWNVVRLNRLTKNAE 53
Query: 61 QLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRID------ 114
Q FW + K L + F++ K++ D ++ + DR+D
Sbjct: 54 QAFWHSDDFDDGVKKLGLATSTPSDNPFLALALSGKEAADHHHQTQPHLHDRMDVSDWVT 113
Query: 115 RMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG 174
R + + + + L+ L S+ S VG+ G V G+ +I ++ + G
Sbjct: 114 RCLKDTMDEGIARMQSGLAILASIGSTAPFVGLFGTVWGIYHALLAIGMSGQTSIDQVAG 173
Query: 175 -IIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+ ESLI GL V+IP+ + YN +K ++ FA+ A
Sbjct: 174 PVGESLIMTAFGLFVAIPAVLGYNALTRANKGVVSKLRRFAHGLHAYF 221
>gi|91781926|ref|YP_557132.1| biopolymer MotA/TolQ/ExbB proton channel family transporter
[Burkholderia xenovorans LB400]
gi|91685880|gb|ABE29080.1| Cell division and transport-associated protein TolQ [Burkholderia
xenovorans LB400]
Length = 225
Score = 204 bits (520), Expect = 7e-51, Method: Composition-based stats.
Identities = 77/229 (33%), Positives = 118/229 (51%), Gaps = 7/229 (3%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
MN D+SI +L + L + ++ LL + S+LSW+ I +K R Q FE
Sbjct: 1 MNT----TQDLSIVSLVLNASLLAQAVMALLLLLSLLSWTFIFRKWFAIRRARTQTERFE 56
Query: 61 QLFWSGQSLETVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMD 118
+ FWSG L+ + +S N+ + L IF S M E+ K +K P I D R M
Sbjct: 57 RDFWSGGDLQALYQSAANNRHTIGALERIFESGMREFLKGKEKRLNDPSAILDGARRAMR 116
Query: 119 VAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV-SIPGIIE 177
A RE++ + L+FL S+ S +G+ G V G+M F+ +A + PGI E
Sbjct: 117 AAFQREMDVLEANLAFLASVGSVSPYIGLFGTVWGIMNAFRGLANVQQATLANVAPGIAE 176
Query: 178 SLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+L + +GL +IP+ +AYN++ D + A++ E F EFS IL RQ +
Sbjct: 177 ALTATAIGLFAAIPAVVAYNRYAHDIDRLAIRFETFIEEFSNILQRQAQ 225
>gi|296104662|ref|YP_003614808.1| biopolymer transport protein ExbB [Enterobacter cloacae subsp.
cloacae ATCC 13047]
gi|295059121|gb|ADF63859.1| biopolymer transport protein ExbB [Enterobacter cloacae subsp.
cloacae ATCC 13047]
Length = 243
Score = 204 bits (520), Expect = 8e-51, Method: Composition-based stats.
Identities = 54/227 (23%), Positives = 107/227 (47%), Gaps = 4/227 (1%)
Query: 6 LAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS 65
L D+S++ ++ + VK ++ L + S+++W++ KS I+ +R+ + +Q
Sbjct: 5 LMQTDLSVWGMYHHADIVVKIVMIGLILASVITWAIFFGKSAELISQKRRLKREQQQLAE 64
Query: 66 GQSLETVCKSLKNHHNIGLAAIFM-SAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARE 124
+SL+ + H L + + A +E + S G+ GI++R ++ +A
Sbjct: 65 ARSLDQASDMTSSFHAKSLTTLLVNEAQNELELSA--GSEDNEGIKERTGFRLERRVAAV 122
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISIL 183
+ +L ++ + VG+ G V G+M F IA + N+ V PGI E+L++
Sbjct: 123 GRHMGRGNGYLATIGAISPFVGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGIAEALLATA 182
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
+GL +IP+ + YN F + + A + + SR + N S
Sbjct: 183 IGLVAAIPAVVIYNVFARMIGSYKATLGDVAAQVLLLQSRDLDLNAS 229
>gi|292486957|ref|YP_003529827.1| biopolymer transport exbb protein [Erwinia amylovora CFBP1430]
gi|291552374|emb|CBA19419.1| Biopolymer transport exbB protein [Erwinia amylovora CFBP1430]
Length = 239
Score = 204 bits (520), Expect = 8e-51, Method: Composition-based stats.
Identities = 50/223 (22%), Positives = 101/223 (45%), Gaps = 2/223 (0%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
MD+S++ ++ + VK ++ L + S+ +W++ KS+ + R++ + + + +S
Sbjct: 3 MDLSVWGMYQHADIVVKAVMIGLLLASVATWAIFFSKSIELRSARKRLKREQLSLAAARS 62
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
LE + L+ + + +E + + GI++R ++ +A
Sbjct: 63 LEEALQIGGGFQRQSLSTLLVKE-AENELELSANSDDNNGIKERTAFRLERQVAAIGRHA 121
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
FL ++ S VG+ G V G+M F IA + N+ V PGI E+L++ +GL
Sbjct: 122 GRGNGFLATIGSIAPFVGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGIAEALLATAIGLV 181
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
+IP+ + YN F + + A + + SR + S
Sbjct: 182 AAIPAVVIYNVFARTIASYKASLGDVAAQVLLLQSRDLDLAAS 224
>gi|296162183|ref|ZP_06844979.1| protein TolQ [Burkholderia sp. Ch1-1]
gi|295887569|gb|EFG67391.1| protein TolQ [Burkholderia sp. Ch1-1]
Length = 225
Score = 204 bits (520), Expect = 8e-51, Method: Composition-based stats.
Identities = 77/229 (33%), Positives = 118/229 (51%), Gaps = 7/229 (3%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
MN D+SI +L + L + ++ LL + S+LSW+ I +K R Q FE
Sbjct: 1 MNT----TQDLSIVSLVLNASLLAQAVMALLLLLSLLSWTFIFRKWFAIRRARAQTERFE 56
Query: 61 QLFWSGQSLETVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMD 118
+ FWSG L+ + +S N+ + L IF S M E+ K +K P I D R M
Sbjct: 57 RDFWSGGDLQALYQSAANNRHTIGALERIFESGMREFLKGKEKRLNDPGAILDGARRAMR 116
Query: 119 VAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV-SIPGIIE 177
A RE++ + L+FL S+ S +G+ G V G+M F+ +A + PGI E
Sbjct: 117 AAFQREMDVLEANLAFLASVGSVSPYIGLFGTVWGIMNAFRGLANVQQATLANVAPGIAE 176
Query: 178 SLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+L + +GL +IP+ +AYN++ D + A++ E F EFS IL RQ +
Sbjct: 177 ALTATAIGLFAAIPAVVAYNRYAHDIDRLAIRFETFIEEFSNILQRQAQ 225
>gi|167036340|ref|YP_001671571.1| tonB-system energizer ExbB [Pseudomonas putida GB-1]
gi|166862828|gb|ABZ01236.1| tonB-system energizer ExbB [Pseudomonas putida GB-1]
Length = 326
Score = 204 bits (520), Expect = 8e-51, Method: Composition-based stats.
Identities = 53/224 (23%), Positives = 101/224 (45%), Gaps = 4/224 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
D+S + ++ + VK ++ L I SI++W++ I K + +R+ R
Sbjct: 95 AHDLSPWGMYKNADIVVKIVMIGLAIASIITWTIWIAKGFELMGAKRRLRGEIAQLKKST 154
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+L+ + + N + A+ E + S AR GI++R+ ++ +
Sbjct: 155 TLKEASE-VSNKEGTLAHTLVHDALEEMRLSA--NAREKEGIKERVSFRLERLVHASGRT 211
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
++ L ++ S VG+ G V G+M F IA + N+ V PGI E+L++ LGL
Sbjct: 212 MSSGTGVLATIGSTAPFVGLFGTVWGIMNSFIGIAKTQTTNLAVVAPGIAEALLATALGL 271
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
+IP+ + YN F + Q+ + + ++SR + S
Sbjct: 272 VAAIPAVVIYNVFARSIAGYKAQVSDASAQVLLLVSRDLDHQGS 315
>gi|332162965|ref|YP_004299542.1| MotA/TolQ/ExbB proton channel family protein [Yersinia
enterocolitica subsp. palearctica 105.5R(r)]
gi|325667195|gb|ADZ43839.1| MotA/TolQ/ExbB proton channel family protein [Yersinia
enterocolitica subsp. palearctica 105.5R(r)]
Length = 336
Score = 204 bits (519), Expect = 8e-51, Method: Composition-based stats.
Identities = 49/216 (22%), Positives = 102/216 (47%), Gaps = 3/216 (1%)
Query: 3 NYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQL 62
GLA MD+S++ ++ + VK ++ L + SI++W+++ K RR+ ++ ++
Sbjct: 95 PQGLA-MDLSVWGMYQHADVVVKGVMIGLVLASIVTWTILFSKGTELFRARRRLQQEHEV 153
Query: 63 FWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIA 122
+ L+T + ++ + + ++ + GI++R ++ +A
Sbjct: 154 IGAVTDLDTASERAAAFSPESISGLLLREAQN-ERLLSAESNDNNGIKERTAFRLERRVA 212
Query: 123 RELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLIS 181
++ + FL ++ + VG+ G V G+M F IA + N+ V PGI E+L++
Sbjct: 213 AISRQMGKGNGFLATIGAISPFVGLFGTVWGIMNSFIGIAHSQTTNLAVVAPGIAEALLA 272
Query: 182 ILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEF 217
LGL +IP+ + YN F + Q+ A +
Sbjct: 273 TALGLVAAIPAVVIYNIFARLIGSYRAQVGDVAAQV 308
>gi|238762418|ref|ZP_04623389.1| TonB complex protein [Yersinia kristensenii ATCC 33638]
gi|238699403|gb|EEP92149.1| TonB complex protein [Yersinia kristensenii ATCC 33638]
Length = 332
Score = 204 bits (519), Expect = 8e-51, Method: Composition-based stats.
Identities = 50/216 (23%), Positives = 103/216 (47%), Gaps = 3/216 (1%)
Query: 3 NYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQL 62
GLA MD+S++ ++ + VK ++ L + SI++W+++ K RR+ R+ ++
Sbjct: 91 PQGLA-MDLSVWGMYQHADVVVKGVMIGLVLASIVTWTILFSKGTELFRARRRLRQEHEV 149
Query: 63 FWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIA 122
+ L+T + + ++ + + ++ + GI++R ++ +A
Sbjct: 150 IGAVADLDTASERAEVFSPESISGLLLREAQN-ERLLSAESDDNNGIKERTAFRLERRVA 208
Query: 123 RELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLIS 181
++ + FL ++ + VG+ G V G+M F IA + N+ V PGI E+L++
Sbjct: 209 AIGRQMGKGNGFLATIGAISPFVGLFGTVWGIMNSFIGIAHSQTTNLAVVAPGIAEALLA 268
Query: 182 ILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEF 217
LGL +IP+ + YN F + Q+ A +
Sbjct: 269 TALGLVAAIPAVVIYNIFARLIGSYRAQVGDVAAQV 304
>gi|262375575|ref|ZP_06068808.1| TolQ [Acinetobacter lwoffii SH145]
gi|262309829|gb|EEY90959.1| TolQ [Acinetobacter lwoffii SH145]
Length = 232
Score = 204 bits (519), Expect = 9e-51, Method: Composition-based stats.
Identities = 61/219 (27%), Positives = 110/219 (50%), Gaps = 3/219 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+ + L +Q V+ ++ L + SI SW +I + +++ + F+++FWSG L
Sbjct: 9 LQVSDLILQASPVVQLVMLSLLLASIYSWYLIARLYMSYKKAQADDEHFQKIFWSGAELN 68
Query: 71 TVCKSLK-NHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
T+ + + N GL IF + E+ K + A + I + +R++ V ++R+ +
Sbjct: 69 TLYNNAQLNSKRTGLEDIFYQGLGEFLKLKKRHAPTAQSI-EGTERILRVGLSRDQGHLE 127
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCV 188
+ L L S+ S VG+ G V G+M F +A + ++ PGI E+LI+ +GL
Sbjct: 128 QGLGALASIGSVAPYVGLFGTVWGIMNAFIGLADVDQVTLATVAPGIAEALIATAIGLFA 187
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEG 227
+IP+ +A+N F + FA E A+L RQ+ G
Sbjct: 188 AIPAVLAFNHFTAKGETVYSDRALFAEEMVALLQRQSVG 226
>gi|302189232|ref|ZP_07265905.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. syringae
642]
Length = 320
Score = 204 bits (519), Expect = 9e-51, Method: Composition-based stats.
Identities = 55/226 (24%), Positives = 104/226 (46%), Gaps = 5/226 (2%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N+ G+A D+S + ++ + VK ++ L I SI++W++ I K + +R+ R
Sbjct: 80 NSLGMA-HDLSPWGMYQNADVVVKAVMIGLAIASIITWTIWISKGFELLGAKRRLRGEIV 138
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
+SL + + + A+ E + S +R GI++R+ ++ +
Sbjct: 139 NLKKARSLTEASATASKEGTLA-HLLVHDALEEMRLSA--NSREREGIKERVSFRLERLV 195
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLI 180
A ++ L ++ S VG+ G V G+M F IA + N+ V PGI E+L+
Sbjct: 196 AACGRNMSMGTGVLATIGSTAPFVGLFGTVWGIMNSFIGIAKTQTTNLAVVAPGIAEALL 255
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+ LGL +IP+ + YN F + Q+ + ++SR +
Sbjct: 256 ATALGLVAAIPAVVIYNVFARSIAGYKAQVSDASAHVLLLVSRDLD 301
>gi|312796625|ref|YP_004029547.1| TolQ protein [Burkholderia rhizoxinica HKI 454]
gi|312168400|emb|CBW75403.1| TolQ protein [Burkholderia rhizoxinica HKI 454]
Length = 244
Score = 204 bits (519), Expect = 9e-51, Method: Composition-based stats.
Identities = 61/228 (26%), Positives = 98/228 (42%), Gaps = 14/228 (6%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
M NYG+A ++ Q + I L I S+LSWSVI+ K N + LRR R E
Sbjct: 1 MQNYGMA-------HVWAQGDFVTRGIAITLLIMSVLSWSVILIKGWNVLRLRRLTRNTE 53
Query: 61 QLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRID------ 114
Q FW L + + F++ K++ D +S + DR+D
Sbjct: 54 QQFWHSDDFTEGLVKLGSTGSGAADNPFVALALSGKEAADHHHKSQPHLHDRMDISDWIT 113
Query: 115 RMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG 174
R + + + ++ L+ L S+ S VG+ G V G+ +I ++ + G
Sbjct: 114 RCLKDTMDDCVAQMQSGLAVLASIGSTAPFVGLFGTVWGIYHALLTIGATGDTSIDKVAG 173
Query: 175 -IIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+ ESLI GL V+IP+ + YN +K ++ FA+ A
Sbjct: 174 PVGESLIMTAFGLFVAIPAVLGYNALTRSNKAVVTKLNRFAHGLHAYF 221
>gi|165924876|ref|ZP_02220708.1| tonB-system energizer ExbB [Yersinia pestis biovar Orientalis str.
F1991016]
gi|167398853|ref|ZP_02304377.1| tonB-system energizer ExbB [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|165923076|gb|EDR40227.1| tonB-system energizer ExbB [Yersinia pestis biovar Orientalis str.
F1991016]
gi|167051357|gb|EDR62765.1| tonB-system energizer ExbB [Yersinia pestis biovar Antiqua str.
UG05-0454]
Length = 332
Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats.
Identities = 48/212 (22%), Positives = 103/212 (48%), Gaps = 4/212 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
MD+S++ ++ + VK ++ L + SI++W+++ K RR+ R+ ++ +
Sbjct: 95 AMDLSVWGMYQNADVVVKGVMIGLVLASIVTWTILFSKGTELFRARRRLRQEHEVIGAVT 154
Query: 68 SLETVCKSLKNHHNIGLAA-IFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
L+T + ++ +++ + A++E + + GI++R ++ +A
Sbjct: 155 DLDTASERAEDFGQGSVSSLLLHEALNE--RLLSIESNDNNGIKERTAFRLERRVAAIGR 212
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVS-IPGIIESLISILLG 185
++ + FL ++ + VG+ G V G+M F IA + N+ PGI E+L++ LG
Sbjct: 213 QMGKGNGFLATIGAISPFVGLFGTVWGIMNSFIGIAHSQTTNLAVIAPGIAEALLATALG 272
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEF 217
L +IP+ + YN F + Q+ A +
Sbjct: 273 LVAAIPAVVIYNIFARQIGNYRAQVGDVAAQV 304
>gi|222054201|ref|YP_002536563.1| protein TolQ [Geobacter sp. FRC-32]
gi|221563490|gb|ACM19462.1| protein TolQ [Geobacter sp. FRC-32]
Length = 224
Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats.
Identities = 56/204 (27%), Positives = 94/204 (46%), Gaps = 9/204 (4%)
Query: 34 FSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMS 93
FS++SW++I K + + F + FW + + + L N L +F
Sbjct: 21 FSVVSWAIIFYKLLQVHRANNESERFLEFFWKAKRFDAINAQLDRFANSPLTVLFNEGYG 80
Query: 94 EWKKSCDKG--------ARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLV 145
E KK +KG + + D I R + A E+ + + L+FL + S +
Sbjct: 81 ELKKLMEKGEEKQDPNVISTDLAGIDNITRALRRATTSEITRLEKYLTFLATTGSTAPFI 140
Query: 146 GILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSK 204
G+ G V G+M F+ I S ++ V PGI E+LI+ +GL +IP+ + YN F + +
Sbjct: 141 GLFGTVWGIMTAFKGIGETGSASLAVVAPGIAEALIATAIGLVAAIPAVMGYNHFQQKIR 200
Query: 205 KFAMQMEGFANEFSAILSRQTEGN 228
+M+ F+ EF I+ R G
Sbjct: 201 VLIGEMDSFSTEFLNIVQRTFTGK 224
>gi|103485826|ref|YP_615387.1| MotA/TolQ/ExbB proton channel [Sphingopyxis alaskensis RB2256]
gi|98975903|gb|ABF52054.1| MotA/TolQ/ExbB proton channel [Sphingopyxis alaskensis RB2256]
Length = 232
Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats.
Identities = 63/217 (29%), Positives = 108/217 (49%), Gaps = 2/217 (0%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+S ALF+Q + VK ++ L SI W+VI L R FE+ FW +++
Sbjct: 14 LSPVALFLQADIIVKAVMIGLLAASIYVWAVIFTHGRGVGKLMRASERFERDFWRADNID 73
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
+ A + + + EW++S G ++R+ M+ AIA E++ + E
Sbjct: 74 RFFDK-NGAEELPSAKVLSAGIGEWRRSTKGKVIDRDGTRERLGIAMNSAIAGEIDRLAE 132
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVS 189
K+ L ++ + VG+ G V G+M F +IA ++++ V PGI E+L + +GL +
Sbjct: 133 KIGTLATIGAVAPFVGLFGTVWGIMRSFTAIAAENNSSLAVVAPGIAEALFATAIGLFAA 192
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
IP+ IAYN F + + ++ FA+ A SR+ E
Sbjct: 193 IPAVIAYNAFSQRLNRLESRLGRFADGLHATFSRELE 229
>gi|187923405|ref|YP_001895047.1| MotA/TolQ/ExbB proton channel [Burkholderia phytofirmans PsJN]
gi|187714599|gb|ACD15823.1| MotA/TolQ/ExbB proton channel [Burkholderia phytofirmans PsJN]
Length = 243
Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats.
Identities = 58/228 (25%), Positives = 98/228 (42%), Gaps = 14/228 (6%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
M NYGLA ++ Q + I L I S++SWSVI+ K N + L R + E
Sbjct: 1 MQNYGLA-------HVWAQGDFVTRGIALALLIMSVMSWSVIVIKGWNVMRLNRLTKNAE 53
Query: 61 QLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRID------ 114
Q FW L K L + F++ +++ D ++ + DR+D
Sbjct: 54 QAFWHSDDLADGVKKLGAGSSTPHDNPFLALALSGQEAADHHHQTQPHLHDRMDVSDWVT 113
Query: 115 RMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG 174
R + + + + L+ L S+ S VG+ G V G+ +I +++ + G
Sbjct: 114 RCLKDTMDESVARMQSGLAILASIGSTAPFVGLFGTVWGIYHALLAIGASGQSSIDQVAG 173
Query: 175 -IIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+ E+LI GL V+IP+ + YN +K ++ FA+ A
Sbjct: 174 PVGEALIMTAFGLFVAIPAVLGYNALTRANKAVVAKLSRFAHGLHAFF 221
>gi|261819732|ref|YP_003257838.1| tonB-system energizer ExbB [Pectobacterium wasabiae WPP163]
gi|261603745|gb|ACX86231.1| tonB-system energizer ExbB [Pectobacterium wasabiae WPP163]
Length = 332
Score = 203 bits (518), Expect = 1e-50, Method: Composition-based stats.
Identities = 50/223 (22%), Positives = 101/223 (45%), Gaps = 4/223 (1%)
Query: 6 LAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS 65
L D+S++ ++ VK ++ L + S+++WS+ KSV +R+ R
Sbjct: 93 LMKTDLSVWGMYQHADAVVKTVMIGLLLASVITWSIFFSKSVEMSGAKRRLRREYLALEQ 152
Query: 66 GQSLETVCKSLKNHHNIGLA-AIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARE 124
++L+ ++ + +A + A +E + S + GI++R ++ +A
Sbjct: 153 AKTLDDALETADSFKAGSVALQLLEDAQNELELSAR--SDDNNGIKERTAFRLERRVAAT 210
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISIL 183
+ +L ++ + VG+ G V G+M F IA + N+ V PGI E+L++
Sbjct: 211 GRHMGRGNGYLATVGAVAPFVGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGIAEALLATA 270
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+GL +IP+ + YN F + + A + + SR +
Sbjct: 271 IGLVAAIPAVVIYNVFARSIAGYKATVGDVAAQVLLLQSRDLD 313
>gi|302189466|ref|ZP_07266139.1| tolQ protein [Pseudomonas syringae pv. syringae 642]
Length = 236
Score = 203 bits (518), Expect = 1e-50, Method: Composition-based stats.
Identities = 59/220 (26%), Positives = 106/220 (48%), Gaps = 3/220 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
++I+ L L VK ++ +L + S++SW +IIQ+S+ R F+Q F S L
Sbjct: 8 MTIWGLISDASLLVKAVMLILLLASLVSWFLIIQRSLALRHYERSMDAFQQRFRSAAELA 67
Query: 71 --TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
S G+ +F + +E+ + + P + ++R + VAI+ + ++
Sbjct: 68 PLQAQASSAQRDAGGIGEVFAAGYAEYLQLKQRPGIEPDVVLSGVERSLQVAISEQELQL 127
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
+ L FL ++ S +G+ G V G+M F ++ + PGI E+LI+ +GL
Sbjct: 128 EKGLQFLATVGSVSPYIGLFGTVWGIMNSFIGLSQVQQATLSTVAPGIAEALIATAIGLF 187
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEG 227
+IP+ IAYN+F + + F NE L+R +G
Sbjct: 188 AAIPAVIAYNRFAARGQTLTARYYSFGNELQVRLNRTLQG 227
>gi|121611697|ref|YP_999504.1| MotA/TolQ/ExbB proton channel [Verminephrobacter eiseniae EF01-2]
gi|121556337|gb|ABM60486.1| MotA/TolQ/ExbB proton channel [Verminephrobacter eiseniae EF01-2]
Length = 235
Score = 203 bits (518), Expect = 1e-50, Method: Composition-based stats.
Identities = 73/228 (32%), Positives = 114/228 (50%), Gaps = 3/228 (1%)
Query: 6 LAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS 65
+ D+SI +L + V+ ++ LL SI SW+ I++K ++ EFE+ FWS
Sbjct: 1 MNSQDMSIISLMLHASWMVQLVLLLLLSVSIASWAAILRKLFALARIKALNEEFEREFWS 60
Query: 66 GQSLETVCKSL--KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAR 123
G SL + + + IF S M E +K ++ P + D R M + R
Sbjct: 61 GASLNDLYANATRNARQAGPMERIFASGMREHQKLRERRIADPGTLLDGARRAMRASFQR 120
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISI 182
E++ + LSFL S+ S VG+ G V G+M F AG + ++ PGI E+L++
Sbjct: 121 EMDVVESSLSFLASVGSVSPYVGLFGTVWGIMHAFTGFAGMAQVTLATVAPGIAEALVAT 180
Query: 183 LLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
+GL +IP+ IAYN+F D + A E F EFS IL R +++
Sbjct: 181 AIGLFAAIPAVIAYNRFARDIDRVATHQETFIEEFSNILQRNLGAHVA 228
>gi|116748198|ref|YP_844885.1| MotA/TolQ/ExbB proton channel [Syntrophobacter fumaroxidans MPOB]
gi|116697262|gb|ABK16450.1| MotA/TolQ/ExbB proton channel [Syntrophobacter fumaroxidans MPOB]
Length = 268
Score = 203 bits (518), Expect = 1e-50, Method: Composition-based stats.
Identities = 58/222 (26%), Positives = 97/222 (43%), Gaps = 9/222 (4%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
F + G VK I+ L + SI W +I+ K+ +++ F F ++ T+
Sbjct: 27 FFDMVRNAGPMVKFIMVSLVVLSIACWCIILLKARLVRRAQKESELFVNYFRQRKNYSTL 86
Query: 73 CKSLKNHHNIGLAAIFMSAMSEWKKS--------CDKGARSPIGIQDRIDRMMDVAIARE 124
+ + LA IF +E + + + +P + + +DR + I E
Sbjct: 87 YRESEPLDESHLAQIFRIGYAELNRLGKSLETKNLQELSTNPEVVLENVDRAIRGGIMAE 146
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISIL 183
+ L L + S +G+ G V G+M F I S N+ V PGI E+L++
Sbjct: 147 RQRFESFLPLLATTGSTAPFIGLFGTVWGIMTSFHEIGLKGSANLAVVAPGISEALVATA 206
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+GL +IP+ +AYN F K ++M FA +F IL R
Sbjct: 207 MGLAAAIPAVVAYNHFANRIKMIEIEMSHFAADFLNILKRDL 248
>gi|270263128|ref|ZP_06191398.1| TonB-system energizer ExbB type-1 [Serratia odorifera 4Rx13]
gi|270042816|gb|EFA15910.1| TonB-system energizer ExbB type-1 [Serratia odorifera 4Rx13]
Length = 323
Score = 203 bits (518), Expect = 1e-50, Method: Composition-based stats.
Identities = 48/211 (22%), Positives = 100/211 (47%), Gaps = 4/211 (1%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
MD+S++ ++ + VK ++ L + SI++W+++ K +R+ R + + ++
Sbjct: 87 MDLSVWGMYQHADIVVKMVMIGLVLASIVTWTILFSKGSELFRAKRRLRREQLALANVRT 146
Query: 69 LETVCKSLKNHHNIGLAAIFM-SAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
L+ + ++ ++ + + A +E + S + GI++R ++ +A
Sbjct: 147 LDEASELAQHFSEESISVVLLNDAQNELELSAESN--DNNGIKERTGFRLERRVAGYSRN 204
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
+ FL ++ + VG+ G V G+M F IA + N+ V PGI E+L++ LGL
Sbjct: 205 MGRGNGFLATIGAISPFVGLFGTVWGIMNSFIGIAHSQTTNLAVVAPGIAEALLATALGL 264
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEF 217
+IP+ + YN F Q+ A +
Sbjct: 265 VAAIPAVVIYNVFARVISGHRAQVGDVAAQV 295
>gi|260431111|ref|ZP_05785082.1| protein TolQ [Silicibacter lacuscaerulensis ITI-1157]
gi|260414939|gb|EEX08198.1| protein TolQ [Silicibacter lacuscaerulensis ITI-1157]
Length = 231
Score = 203 bits (518), Expect = 1e-50, Method: Composition-based stats.
Identities = 85/230 (36%), Positives = 127/230 (55%), Gaps = 4/230 (1%)
Query: 1 MNNYGLAI---MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFR 57
M LA+ +D S++ LF + VK ++ +L + S SWS+IIQ+ +N+ RR+
Sbjct: 1 MEAETLALAQEIDFSMWGLFARATFIVKVVMLMLVVASFWSWSIIIQRLINYRAARREAE 60
Query: 58 EFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMM 117
F+Q FWSG L+ + + + + IF + M EW++S G RIDR M
Sbjct: 61 AFDQAFWSGNPLDELFEQIGPQPDGASEKIFAAGMIEWRRSHRNDGGLIAGATARIDRSM 120
Query: 118 DVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGII 176
DVAIA+E E++ + L L ++ S +G+ G V G+M F IA + N+ V PGI
Sbjct: 121 DVAIAKEAEKLKKGLPILATVGSTAPFIGLFGTVWGIMNAFIEIAEQQNTNLAVVAPGIA 180
Query: 177 ESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
E+L++ LGL +IP+ I YNK DS E FA+EF+ ILSRQ +
Sbjct: 181 EALLATGLGLLAAIPAVIFYNKLSADSDHIIGGYEAFADEFATILSRQLD 230
>gi|14595284|gb|AAK70856.1|AF315582_1 ExbB [Pseudomonas putida]
Length = 320
Score = 203 bits (517), Expect = 1e-50, Method: Composition-based stats.
Identities = 53/224 (23%), Positives = 101/224 (45%), Gaps = 4/224 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
D+S + ++ + VK ++ L I SI++W++ I K + +R+ R
Sbjct: 89 AHDLSPWGMYKNADIVVKIVMIGLAIASIITWTIWIAKGFELMGAKRRLRGEIAQLKKST 148
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+L+ + + N + A+ E + S AR GI++R+ ++ +
Sbjct: 149 TLKEASE-VSNKEGTLAHTLVHDALEEMRLSA--NAREKEGIKERVSFRLERLVHASGRT 205
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
++ L ++ S VG+ G V G+M F IA + N+ V PGI E+L++ LGL
Sbjct: 206 MSSGTGVLATIGSTAPFVGLFGTVWGIMNSFIGIAKTQTTNLAVVAPGIAEALLATALGL 265
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
+IP+ + YN F + Q+ + + ++SR + S
Sbjct: 266 VAAIPAVVIYNVFARSIAGYKAQVSDASAQVLLLVSRDLDHQGS 309
>gi|325291602|ref|YP_004277466.1| biopolymer transport protein [Agrobacterium sp. H13-3]
gi|325059455|gb|ADY63146.1| biopolymer transport protein [Agrobacterium sp. H13-3]
Length = 387
Score = 203 bits (517), Expect = 1e-50, Method: Composition-based stats.
Identities = 48/221 (21%), Positives = 96/221 (43%), Gaps = 3/221 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
++S + +FM VK ++ L S+++W+V + KS+ R + ++ +
Sbjct: 149 PHNLSPWGMFMAADWVVKGVMIGLAFASLVTWTVWVAKSIELAGARVRAGATLKVIRRAK 208
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKS-CDKGARSPIGIQDRIDRMMDVAIARELE 126
+L ++++ A + A E + S GI++R+ +
Sbjct: 209 TLNEATEAVEK-KGGPAALMLRMATHEMQLSDAVVEHTDGGGIKERVSSALSRIETHAGR 267
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLG 185
++ L ++ S VG+ G V G+M F SI+ + N+ V PGI E+L++ +G
Sbjct: 268 RMSRGTGALATIGSTAPFVGLFGTVWGIMNSFISISESQTTNLAVVAPGIAEALLATAIG 327
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
L +IP+ + YN F + + A ++SR +
Sbjct: 328 LVAAIPAVVIYNVFARSITGYRHLLADAAAGVERLVSRDLD 368
>gi|153948974|ref|YP_001399584.1| tonB-system energizer ExbB [Yersinia pseudotuberculosis IP 31758]
gi|152960469|gb|ABS47930.1| tonB-system energizer ExbB [Yersinia pseudotuberculosis IP 31758]
Length = 237
Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats.
Identities = 49/211 (23%), Positives = 104/211 (49%), Gaps = 4/211 (1%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
MD+S++ ++ + VK ++ L + SI++W+++ K RR+ R+ ++ +
Sbjct: 1 MDLSVWGMYQNADVVVKGVMIGLVLASIVTWTILFSKGTELFRARRRLRQEHEVIGAVTD 60
Query: 69 LETVCKSLKNHHNIGLAA-IFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
L+T + ++ +++ + A++E + + GI++R ++ +A +
Sbjct: 61 LDTASERAEDFGQGSVSSLLLHEALNE--RLLSIESNDNNGIKERTAFRLERRVAAIGRQ 118
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
+ + FL ++ + VG+ G V G+M F IA + N+ V PGI E+L++ LGL
Sbjct: 119 MGKGNGFLATIGAISPFVGLFGTVWGIMNSFIGIAHSQTTNLAVVAPGIAEALLATALGL 178
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEF 217
+IP+ + YN F + Q+ A +
Sbjct: 179 VAAIPAVVIYNIFARQIGNYRAQVGDVAAQV 209
>gi|304312898|ref|YP_003812496.1| TolQ-related transport transmembrane protein [gamma proteobacterium
HdN1]
gi|301798631|emb|CBL46863.1| TolQ-related transport transmembrane protein [gamma proteobacterium
HdN1]
Length = 249
Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats.
Identities = 68/228 (29%), Positives = 110/228 (48%), Gaps = 3/228 (1%)
Query: 6 LAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS 65
L +S +L + V+ ++ +L SI SW +I Q+ RR FE+ FWS
Sbjct: 21 LVQHSMSFTSLVLNATWVVQLVMLVLLGLSISSWYIIWQRRSLLGESRRAAENFEERFWS 80
Query: 66 GQSLETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAR 123
G L + + N + G AIF + E+ + G P I +R M VA+ +
Sbjct: 81 GIDLSRLFVQVNNEPDHYSGHEAIFRAGFKEFARLRKVGNAEPDSIMAGAERAMKVALLK 140
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISI 182
E E + LSFL ++ S +G+ G V G+M F ++A + PGI E+LI+
Sbjct: 141 EQERLEANLSFLATVGSVSPYIGLFGTVWGIMHAFINLANQNQATLSAVAPGIAEALIAT 200
Query: 183 LLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
+GL +IP+ +A+N++ ++ E FA+EFS IL R+ +
Sbjct: 201 AIGLVAAIPAVVAFNRYTSLCERLLHNYETFADEFSGILHRKAHSKEA 248
>gi|170694658|ref|ZP_02885810.1| MotA/TolQ/ExbB proton channel [Burkholderia graminis C4D1M]
gi|170140540|gb|EDT08716.1| MotA/TolQ/ExbB proton channel [Burkholderia graminis C4D1M]
Length = 242
Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats.
Identities = 57/228 (25%), Positives = 98/228 (42%), Gaps = 14/228 (6%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
M NYGLA ++ Q + I L + S++SWSVI+ K N + L R + E
Sbjct: 1 MQNYGLA-------HVWAQGDFVTRGIALALLVMSVMSWSVIVIKGWNVMRLNRLTKNAE 53
Query: 61 QLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRID------ 114
Q FW L K L + F++ +++ D ++ + DR+D
Sbjct: 54 QAFWHSDDLADGVKKLGAGASTPQDNPFLALALSGQEAADHHHQTQPHLHDRMDVSDWVT 113
Query: 115 RMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG 174
R + + + + L+ L S+ S VG+ G V G+ +I +++ + G
Sbjct: 114 RCLKDTMDESVARMQSGLAILASIGSTAPFVGLFGTVWGIYHALLAIGASGQSSIDQVAG 173
Query: 175 -IIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+ E+LI GL V+IP+ + YN +K ++ FA+ A
Sbjct: 174 PVGEALIMTAFGLFVAIPAVLGYNALTRANKAIVAKLSRFAHGLHAFF 221
>gi|121595092|ref|YP_986988.1| MotA/TolQ/ExbB proton channel [Acidovorax sp. JS42]
gi|222111435|ref|YP_002553699.1| protein tolq [Acidovorax ebreus TPSY]
gi|120607172|gb|ABM42912.1| Cell division and transport-associated protein TolQ [Acidovorax sp.
JS42]
gi|221730879|gb|ACM33699.1| protein TolQ [Acidovorax ebreus TPSY]
Length = 233
Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats.
Identities = 74/228 (32%), Positives = 117/228 (51%), Gaps = 3/228 (1%)
Query: 6 LAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS 65
+ D+SI +L + V+ ++ LL S+ SW+ I +K ++ +FE+ FWS
Sbjct: 1 MNSQDMSILSLVLNASWVVQLVMLLLLAVSVASWAAIFRKLFALKRVKALNEDFERDFWS 60
Query: 66 GQSLETVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAR 123
G SL + S ++ + IF S M E++K ++ P + D R M + R
Sbjct: 61 GTSLNDLYASATHNAKSAGPMERIFASGMREYQKLRERRISDPGTLLDGARRAMRASFQR 120
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISI 182
E++ I LSFLGS++S VG+ G V G+M F AG + ++ PGI E+L++
Sbjct: 121 EMDVIESSLSFLGSVASVSPYVGLFGTVWGIMHAFTGFAGMEQVTLATVAPGIAEALVAT 180
Query: 183 LLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
+GL +IP+ IAYN+F D + A E F EFS IL R + +
Sbjct: 181 AIGLFAAIPAVIAYNRFARDIDRVATHQETFIEEFSNILQRNLGAHPA 228
>gi|320322263|gb|EFW78359.1| TonB system transport protein ExbB1 [Pseudomonas syringae pv.
glycinea str. B076]
gi|320331912|gb|EFW87850.1| TonB system transport protein ExbB1 [Pseudomonas syringae pv.
glycinea str. race 4]
Length = 314
Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats.
Identities = 55/226 (24%), Positives = 104/226 (46%), Gaps = 5/226 (2%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N+ G+A D+S + ++ + VK ++ L I SI++W++ I K + +R+ R
Sbjct: 74 NSLGMA-HDLSPWGMYQNADVVVKAVMIGLAIVSIITWTIWISKGFELLGAKRRLRGEIV 132
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
+SL + + + A+ E + S +R GI++R+ ++ +
Sbjct: 133 NLKKARSLNEASSTASKEGTLA-HLLVHDALEEMRLSA--NSREREGIKERVSFRLERLV 189
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLI 180
A ++ L ++ S VG+ G V G+M F IA + N+ V PGI E+L+
Sbjct: 190 AACGRNMSMGTGVLATIGSTAPFVGLFGTVWGIMNSFIGIAKTQTTNLAVVAPGIAEALL 249
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+ LGL +IP+ + YN F + Q+ + ++SR +
Sbjct: 250 ATALGLVAAIPAVVIYNVFARSIAGYKAQVSDASAHVLLLVSRDLD 295
>gi|330873188|gb|EGH07337.1| TonB system transport protein ExbB1 [Pseudomonas syringae pv.
glycinea str. race 4]
Length = 302
Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats.
Identities = 55/226 (24%), Positives = 104/226 (46%), Gaps = 5/226 (2%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N+ G+A D+S + ++ + VK ++ L I SI++W++ I K + +R+ R
Sbjct: 62 NSLGMA-HDLSPWGMYQNADVVVKAVMIGLAIVSIITWTIWISKGFELLGAKRRLRGEIV 120
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
+SL + + + A+ E + S +R GI++R+ ++ +
Sbjct: 121 NLKKARSLNEASSTASKEGTLA-HLLVHDALEEMRLSA--NSREREGIKERVSFRLERLV 177
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLI 180
A ++ L ++ S VG+ G V G+M F IA + N+ V PGI E+L+
Sbjct: 178 AACGRNMSMGTGVLATIGSTAPFVGLFGTVWGIMNSFIGIAKTQTTNLAVVAPGIAEALL 237
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+ LGL +IP+ + YN F + Q+ + ++SR +
Sbjct: 238 ATALGLVAAIPAVVIYNVFARSIAGYKAQVSDASAHVLLLVSRDLD 283
>gi|294651069|ref|ZP_06728407.1| TonB family auxiliary protein TolQ [Acinetobacter haemolyticus ATCC
19194]
gi|292823048|gb|EFF81913.1| TonB family auxiliary protein TolQ [Acinetobacter haemolyticus ATCC
19194]
Length = 232
Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats.
Identities = 65/220 (29%), Positives = 112/220 (50%), Gaps = 3/220 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+ I L +Q V+ ++ +L + SI SW VI + ++F + F+++FWSG L
Sbjct: 9 MHISDLILQASPVVQLVMLILLLASIYSWYVIAKLHMSFKKTGQDDEHFQKMFWSGAELN 68
Query: 71 TVCKSLK-NHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
T+ + + N GL +F +SE+ K + A + I + +RM+ V ++RE +
Sbjct: 69 TLYNNAQLNSKRNGLEDVFYQGLSEFFKLKKRKADTTQTI-EGTERMLRVGLSREQGGLE 127
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCV 188
+ L L S+ S +G+ G V G+M F +A + ++ PGI E+LI+ +GL
Sbjct: 128 QNLGVLASIGSVAPYIGLFGTVWGIMNAFIGLAAVDQVTLATVAPGIAEALIATAIGLFA 187
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
+IP+ +A+N F + FA E A+L RQ+ G
Sbjct: 188 AIPAVLAFNHFTAKGEAIYSDRALFAEEMVALLQRQSIGT 227
>gi|91788751|ref|YP_549703.1| MotA/TolQ/ExbB proton channel [Polaromonas sp. JS666]
gi|91697976|gb|ABE44805.1| Cell division and transport-associated protein TolQ [Polaromonas
sp. JS666]
Length = 230
Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats.
Identities = 71/223 (31%), Positives = 115/223 (51%), Gaps = 3/223 (1%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
D+SI +L + V+ ++ LL SI SW+ I +K V +++ +F++ FWSG S
Sbjct: 3 QDLSIVSLILNASWVVQLVVALLVGVSIASWAAIFRKIVALKKVQKLNDDFDREFWSGTS 62
Query: 69 LETVCKSLKNH--HNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
L + + H+ + IF S M E++K ++ + D R M + REL+
Sbjct: 63 LNDLFAGAAQNAKHSGAMERIFASGMREYQKLRERRIADTGTLLDGARRAMRASYQRELD 122
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLG 185
I LSFL ++ S VG+ G V G+M F +A + ++ PGI E+L++ +G
Sbjct: 123 AIEVNLSFLATVGSVSPYVGLFGTVWGIMHAFTGLAALEQVTLATVAPGIAEALVATAIG 182
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
L +IP+ +AYN+F D + A ++E F EFS IL R
Sbjct: 183 LFAAIPAVVAYNRFAHDIDRVANRLETFIEEFSNILQRNLGAQ 225
>gi|78358668|ref|YP_390117.1| tolQ protein [Desulfovibrio desulfuricans subsp. desulfuricans str.
G20]
gi|78221073|gb|ABB40422.1| Cell division and transport-associated protein TolQ [Desulfovibrio
desulfuricans subsp. desulfuricans str. G20]
Length = 228
Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats.
Identities = 57/220 (25%), Positives = 114/220 (51%), Gaps = 2/220 (0%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
M+ +IF L MQ VK ++++L + S+ SWS+++QK + + RR+ + F +
Sbjct: 1 MESNIFGLLMQATPVVKGVLSILVLMSVASWSLMLQKWIVLSSARRKAAQGLSAFTHARD 60
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
L +SL H L + ++E+ + D + + + D + R + ++ + +
Sbjct: 61 LREAVQSLSGDHTSPLYQVAQEGVAEYNRLRDMQSSEDV-VADNVRRALRQGVSMQTSRL 119
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLC 187
+ L+FL + ++A +G+ G V G+M F SI + ++ ++ PGI E+L++ +GL
Sbjct: 120 SSSLAFLATCANAAPFIGLFGTVWGIMHSFHSIGLMKTASLAAVAPGISEALVATAIGLG 179
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEG 227
V+IP+++ YN F+ +Q+ FA F + R+
Sbjct: 180 VAIPATVGYNLFLGMLNGIEVQLVNFAGVFLNRVQRELHA 219
>gi|312796777|ref|YP_004029699.1| TolQ protein [Burkholderia rhizoxinica HKI 454]
gi|312168552|emb|CBW75555.1| TolQ protein [Burkholderia rhizoxinica HKI 454]
Length = 225
Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats.
Identities = 78/229 (34%), Positives = 123/229 (53%), Gaps = 7/229 (3%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
MNN D+SI AL + L + ++ LL + S++SW+ I +K + R Q FE
Sbjct: 1 MNN----AQDLSIIALVLNASLLAQAVMALLLLLSLMSWTFIFRKWFSIRRARAQTELFE 56
Query: 61 QLFWSGQSLETVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMD 118
+ FWSG L+++ +S N+ + L IF S M E+ K+ +K P I D R M
Sbjct: 57 RDFWSGGELQSLYQSAANNRHTIGALERIFESGMREFLKAKEKRVADPGAILDGARRAMR 116
Query: 119 VAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV-SIPGIIE 177
A RE++ + L+FL S+ S +G+ G V G+M F+ +A + PGI E
Sbjct: 117 AAFQREMDALEANLAFLASVGSVSPYIGLFGTVWGIMNAFRGLANVQQATLASVAPGIAE 176
Query: 178 SLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+L++ +GL +IP+ +AYN++ D + +++ E F EFS IL RQT
Sbjct: 177 ALVATAIGLFAAIPAVVAYNRYAHDIDRLSIRFETFIEEFSNILQRQTH 225
>gi|115352289|ref|YP_774128.1| MotA/TolQ/ExbB proton channel [Burkholderia ambifaria AMMD]
gi|115282277|gb|ABI87794.1| outer membrane transport energization protein ExbB [Burkholderia
ambifaria AMMD]
Length = 243
Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats.
Identities = 58/228 (25%), Positives = 95/228 (41%), Gaps = 14/228 (6%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
M +YG+A ++ Q + I L + S+LSW VII K N I L R + E
Sbjct: 1 MQSYGIA-------HVWAQGDFVTRAIAITLLVMSVLSWIVIIVKGWNVIRLNRLTKNAE 53
Query: 61 QLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRID------ 114
Q FW + K L + F++ K++ D ++ + DR+D
Sbjct: 54 QAFWHSDDFDDGIKKLGLTASTPSDNPFLALALSGKEAADHHHQTQPHLHDRMDVSDWVT 113
Query: 115 RMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG 174
R + + + + L+ L S+ S VG+ G V G+ I ++ + G
Sbjct: 114 RCLKDTMDEGISRMQAGLAILASIGSTAPFVGLFGTVWGIYHALLVIGATGQTSIDQVAG 173
Query: 175 -IIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+ ESLI GL V+IP+ + YN +K ++ FA+ A
Sbjct: 174 PVGESLIMTAFGLFVAIPAVLGYNALTRANKGVVSKLRRFAHGLHAYF 221
>gi|88800182|ref|ZP_01115750.1| TolQ protein [Reinekea sp. MED297]
gi|88777028|gb|EAR08235.1| TolQ protein [Reinekea sp. MED297]
Length = 213
Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats.
Identities = 61/202 (30%), Positives = 98/202 (48%), Gaps = 3/202 (1%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGL--A 85
+ L S+ +W I ++ + FE+ FWSG L + + + + +
Sbjct: 1 MLTLVALSVATWVFIFERRNVMNQAASKLAAFEERFWSGIDLAHLYRQVNANPDEANCGE 60
Query: 86 AIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLV 145
+IF + E+ + + GI R M VA+++E + + LSF+ ++ S +
Sbjct: 61 SIFRAGFKEFSRMRQQNVTDADGIMAGCQRAMRVAVSKENDRLDSHLSFMATVGSTSPYI 120
Query: 146 GILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSK 204
G+ G V G+M F +A ++ PGI E+LI+ +GL +IP+ IAYN+F S
Sbjct: 121 GLFGTVWGIMHSFLGLATVTQVSLSTVAPGIAEALIATAMGLFAAIPAVIAYNRFSARSD 180
Query: 205 KFAMQMEGFANEFSAILSRQTE 226
K ME FA EFSAIL RQ
Sbjct: 181 KILTGMEMFAEEFSAILHRQAH 202
>gi|194290134|ref|YP_002006041.1| biopolymer transporter [Cupriavidus taiwanensis LMG 19424]
gi|193223969|emb|CAQ69978.1| BIOPOLYMER TRANSPORT PROTEIN [Cupriavidus taiwanensis LMG 19424]
Length = 242
Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats.
Identities = 45/217 (20%), Positives = 94/217 (43%), Gaps = 3/217 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
+ D+ + L+ Q ++ +L I S+ SW VI+ K+ + + L++ + E+ FW
Sbjct: 1 MQDLGLTHLWSQGDFVMRATAIILLIMSLASWIVILTKAWDLVRLKKMAQGAEKRFWHSD 60
Query: 68 SLETVCKSLKNHHNIGLAAIFMSA--MSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
+ ++L + + ++ ++ ++ + I D + R + +I +
Sbjct: 61 DFDHALETLGAGDSNPFRTLAIAGKEAAQHHRASQPQLHDVMDISDWLTRSLKSSIDESV 120
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILL 184
+ L+ L S+ S VG+ G V G+ I + + G + E+LI
Sbjct: 121 ARMQSGLAVLASVGSTAPFVGLFGTVWGIYHALIGIGASGVPTIDKVAGPVGEALIMTAF 180
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
GL V+IP+ + YN +K ++ FA++ A
Sbjct: 181 GLAVAIPAVLGYNALTRGNKSVISKLNRFAHDLHAYF 217
>gi|170702371|ref|ZP_02893263.1| MotA/TolQ/ExbB proton channel [Burkholderia ambifaria IOP40-10]
gi|170132730|gb|EDT01166.1| MotA/TolQ/ExbB proton channel [Burkholderia ambifaria IOP40-10]
Length = 243
Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats.
Identities = 58/228 (25%), Positives = 95/228 (41%), Gaps = 14/228 (6%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
M +YG+A ++ Q + I L + S+LSW VII K N I L R + E
Sbjct: 1 MQSYGIA-------HVWAQGDFVTRAIAITLLVMSVLSWIVIIVKGWNVIRLNRLTKNAE 53
Query: 61 QLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRID------ 114
Q FW + K L + F++ K++ D ++ + DR+D
Sbjct: 54 QAFWHSDDFDDGIKKLGLTASTPNDNPFLALALSGKEAADHHHQTQPHLHDRMDVSDWVT 113
Query: 115 RMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG 174
R + + + + L+ L S+ S VG+ G V G+ I ++ + G
Sbjct: 114 RCLKDTMDEGISRMQAGLAILASIGSTAPFVGLFGTVWGIYHALLVIGATGQTSIDQVAG 173
Query: 175 -IIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+ ESLI GL V+IP+ + YN +K ++ FA+ A
Sbjct: 174 PVGESLIMTAFGLFVAIPAVLGYNALTRANKGVVSKLRRFAHGLHAYF 221
>gi|39995139|ref|NP_951090.1| tolQ protein [Geobacter sulfurreducens PCA]
gi|39981901|gb|AAR33363.1| tolQ protein [Geobacter sulfurreducens PCA]
gi|298504169|gb|ADI82892.1| TolQ-related biopolymer transport membrane proton channel
[Geobacter sulfurreducens KN400]
Length = 225
Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats.
Identities = 57/207 (27%), Positives = 95/207 (45%), Gaps = 10/207 (4%)
Query: 32 FIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSA 91
FS++SW++I K + + F FW + + + L N L+ +F
Sbjct: 19 IFFSVVSWAIIFFKLLQINRANGESDRFLDFFWKTKRFDAISSQLDRFGNSPLSVLFNEG 78
Query: 92 MSEWKKSCDKGA---------RSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAG 142
+E ++ DKG + +G D I R + A E+ + + ++FL + S
Sbjct: 79 YAELRRLLDKGGEQRDEPGVVSTDLGGIDNIARALRRATTSEITRLEKYVTFLATTGSTA 138
Query: 143 LLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIE 201
+G+ G V G+M F+ I S ++ V PGI E+LI+ +GL +IP+ +AYN F
Sbjct: 139 PFIGLFGTVWGIMNAFKGIGETGSASLAVVAPGIAEALIATAIGLVAAIPAVMAYNHFQH 198
Query: 202 DSKKFAMQMEGFANEFSAILSRQTEGN 228
K M+ F+ EF I+ R G
Sbjct: 199 KIKVLIASMDNFSTEFLNIVQRTFAGK 225
>gi|254284318|ref|ZP_04959286.1| protein TolQ [gamma proteobacterium NOR51-B]
gi|219680521|gb|EED36870.1| protein TolQ [gamma proteobacterium NOR51-B]
Length = 234
Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats.
Identities = 60/222 (27%), Positives = 108/222 (48%), Gaps = 6/222 (2%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
++ + L + + V+ ++ LL + S+ SW +I+Q+ + +FE+ FWSG L
Sbjct: 4 ELGLIELILGASITVQLVMLLLVLASVTSWYMIVQRMILLRRTDDALLDFEEQFWSGVDL 63
Query: 70 ETVCKSLKN-----HHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARE 124
+ + G+ +IF + E+ + + + + R M VA RE
Sbjct: 64 AELYREGNQAVNDGQPPTGIESIFRAGFKEFSRLSQQSDIDADAVLEGARRAMRVATLRE 123
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISIL 183
+ + L FL S+ S +G+ G V G+M F+ +A + ++ PGI E+LI+
Sbjct: 124 GDRLEMHLPFLASVGSTSPYIGLFGTVWGIMHSFRGLANATQATLAAVAPGISEALIATA 183
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+GL +IP+ +AYN+F + + F +EFS IL RQ+
Sbjct: 184 MGLFAAIPAVLAYNRFAARVDGLINRYDTFVDEFSGILQRQS 225
>gi|254447611|ref|ZP_05061077.1| MotA/TolQ/ExbB proton channel [gamma proteobacterium HTCC5015]
gi|198262954|gb|EDY87233.1| MotA/TolQ/ExbB proton channel [gamma proteobacterium HTCC5015]
Length = 305
Score = 202 bits (515), Expect = 2e-50, Method: Composition-based stats.
Identities = 57/220 (25%), Positives = 106/220 (48%), Gaps = 3/220 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
D+S ++ Q VK ++ L S+++W+V K++ +T++R +E Q +
Sbjct: 69 PHDLSPMGMYRQADWVVKAVMLGLLFASVVTWTVWAVKALQLMTVKRHAKEAVQHLQQAK 128
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
SL+ +L++ + + +A E S D+ A S G+++R + A +
Sbjct: 129 SLKEALLALQSSKG-AIPMLAKAAQHELHLSSDR-AMSKDGVKERTFSRLQDIEAITGRQ 186
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
+ + L ++ S VG+ G V G+M F IA + N+ V PGI E+L++ +GL
Sbjct: 187 LNQGTGLLATIGSTAPFVGLFGTVWGIMNSFIGIAAANTTNLAVVAPGIAEALLATAIGL 246
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ I YN F F Q+ ++E ++SR +
Sbjct: 247 LAAIPAVIIYNHFARGMGAFRGQLGNASSEVLRLVSRDLD 286
>gi|32491164|ref|NP_871418.1| hypothetical protein WGLp415 [Wigglesworthia glossinidia
endosymbiont of Glossina brevipalpis]
gi|25166371|dbj|BAC24561.1| tolQ [Wigglesworthia glossinidia endosymbiont of Glossina
brevipalpis]
Length = 235
Score = 202 bits (515), Expect = 2e-50, Method: Composition-based stats.
Identities = 71/222 (31%), Positives = 107/222 (48%), Gaps = 4/222 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
+++ +IF LF++ L +K I LF SI SW +I K L ++ FE+ FWS +
Sbjct: 1 MINTNIFDLFLKSDLILKIIFLFLFFCSITSWMIIFYKFFILRKLEKKMEIFEKKFWSKK 60
Query: 68 SLETVCKSLK--NHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
++ + + G IF E+ K + P + + R M++ RE+
Sbjct: 61 NISNIYNDISFNKKELTGCEQIFFYGFKEFSKLNHEEVNDPQSVINGTKRAMNIITNREI 120
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVS--IPGIIESLISIL 183
E I LS LGS+SS VG+LG V +M F I GY N + P I E+L +
Sbjct: 121 EFIEFNLSTLGSISSVSPYVGLLGTVWSIMNTFYKIGGYSENITIQNIAPEISEALSTTA 180
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+ L V+IP+ IA+NK S + F+ E SAIL R+
Sbjct: 181 ISLFVAIPALIAFNKLNVKSNIISQNYLNFSEELSAILHRKI 222
>gi|78066997|ref|YP_369766.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. 383]
gi|77967742|gb|ABB09122.1| outer membrane transport energization protein ExbB [Burkholderia
sp. 383]
Length = 243
Score = 202 bits (515), Expect = 3e-50, Method: Composition-based stats.
Identities = 57/228 (25%), Positives = 96/228 (42%), Gaps = 14/228 (6%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
M +YG+A ++ Q + I L + S+LSW VI+ K N I L R + E
Sbjct: 1 MQSYGIA-------HVWAQGDFVTRAIAITLLVMSVLSWIVIVIKGWNVIRLNRLTKNAE 53
Query: 61 QLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRID------ 114
Q FW + K L + F++ K++ D ++ + DR+D
Sbjct: 54 QAFWHSDDFDDGIKKLGLAASTPNDNPFLALALSGKEAADHHHQTQPHLHDRMDVSDWVT 113
Query: 115 RMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG 174
R + + + + L+ L S+ S VG+ G V G+ +I ++ + G
Sbjct: 114 RCLKDTMDEGISRMQSGLAILASIGSTAPFVGLFGTVWGIYHALLAIGASGQTSIDQVAG 173
Query: 175 -IIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+ ESLI GL V+IP+ + YN +K ++ FA+ A
Sbjct: 174 PVGESLIMTAFGLFVAIPAVLGYNALTRANKGIVSKLRRFAHGLHAYF 221
>gi|171320683|ref|ZP_02909699.1| MotA/TolQ/ExbB proton channel [Burkholderia ambifaria MEX-5]
gi|171094086|gb|EDT39179.1| MotA/TolQ/ExbB proton channel [Burkholderia ambifaria MEX-5]
Length = 243
Score = 202 bits (515), Expect = 3e-50, Method: Composition-based stats.
Identities = 59/228 (25%), Positives = 96/228 (42%), Gaps = 14/228 (6%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
M +YG+A ++ Q + I L + S+LSW VII K N I L R + E
Sbjct: 1 MQSYGIA-------HVWAQGDFVTRAIAITLLVMSVLSWIVIIVKGWNVIRLNRLTKNAE 53
Query: 61 QLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRID------ 114
Q FW + K L + F++ K++ D ++ + DR+D
Sbjct: 54 QAFWHSDDFDDGIKKLGLTASTPSDNPFLALALSGKEAADHHHQTQPHLHDRMDVSDWVT 113
Query: 115 RMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG 174
R + + + + L+ L S+ S VG+ G V G+ I ++ + G
Sbjct: 114 RCLKDTMDEGISRMQAGLAILASIGSTAPFVGLFGTVWGIYHALLVIGATGQTSIDQVAG 173
Query: 175 -IIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+ ESLI GL V+IP+ + YN +K A ++ FA+ A
Sbjct: 174 PVGESLIMTAFGLFVAIPAVLGYNALTRANKGVASKLRRFAHGLHAYF 221
>gi|313501280|gb|ADR62646.1| TonB-system energizer ExbB type-1 [Pseudomonas putida BIRD-1]
Length = 324
Score = 202 bits (515), Expect = 3e-50, Method: Composition-based stats.
Identities = 53/224 (23%), Positives = 101/224 (45%), Gaps = 4/224 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
D+S + ++ + VK ++ L I SI++W++ I K + +R+ R
Sbjct: 93 AHDLSPWGMYKNADIVVKIVMIGLAIASIITWTIWIAKGFELMGAKRRLRGEIAQLKKST 152
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+L+ + + N + A+ E + S AR GI++R+ ++ +
Sbjct: 153 TLKEASE-VSNKEGTLAHTLVHDALEEMRLSA--NAREKEGIKERVSFRLERLVHASGRT 209
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
++ L ++ S VG+ G V G+M F IA + N+ V PGI E+L++ LGL
Sbjct: 210 MSSGTGVLATIGSTAPFVGLFGTVWGIMNSFIGIAKTQTTNLAVVAPGIAEALLATALGL 269
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
+IP+ + YN F + Q+ + + ++SR + S
Sbjct: 270 VAAIPAVVIYNVFARSIAGYKAQVSDASAQVLLLVSRDLDHQGS 313
>gi|114570969|ref|YP_757649.1| MotA/TolQ/ExbB proton channel [Maricaulis maris MCS10]
gi|114341431|gb|ABI66711.1| Cell division and transport-associated protein TolQ [Maricaulis
maris MCS10]
Length = 222
Score = 202 bits (515), Expect = 3e-50, Method: Composition-based stats.
Identities = 68/215 (31%), Positives = 110/215 (51%), Gaps = 10/215 (4%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
S +ALFM+ VK ++ +L SI SW++ I KS+ L + R+FE+ FWSG+SL+
Sbjct: 15 FSFYALFMRADWVVKGVMGILAFMSIWSWAIAIDKSLQLRGLHAKGRQFEREFWSGRSLD 74
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
+ + + +F + + EWK G R+ + R++ E
Sbjct: 75 ALSDQFAKNAREPFSRVFAAGLREWKGDNPGG---------RVAKAAGAEAGRQMTESEG 125
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVS 189
L L +++SA VG+ G V G+M F+SIA N+ V PGI E+L + LGL +
Sbjct: 126 GLGILATIASAAPFVGLFGTVWGIMNAFRSIAASQDTNLAVVAPGIAEALFATALGLLAA 185
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
IP+ I +N + K+ +++GF +E SA+ R
Sbjct: 186 IPAVIFFNALSANLAKYGSRLDGFVDELSALADRD 220
>gi|126442436|ref|YP_001061618.1| MotA/TolQ/ExbB proton channel family protein [Burkholderia
pseudomallei 668]
gi|126221927|gb|ABN85432.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei 668]
Length = 242
Score = 202 bits (515), Expect = 3e-50, Method: Composition-based stats.
Identities = 57/228 (25%), Positives = 96/228 (42%), Gaps = 14/228 (6%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
M +YG+A ++ Q + I L + SILSW VI+ K N I L+R ++ E
Sbjct: 1 MQSYGIA-------HVWAQGDFVTRFIAIALLVMSILSWMVIVIKGWNVIRLKRLSKDAE 53
Query: 61 QLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRID------ 114
Q FW + L + F++ K++ D ++ + DR+D
Sbjct: 54 QSFWHSDDFDEGVDKLGRASSSSQDNPFLALALSGKEAADHHHQTQPHLHDRMDVSDWVT 113
Query: 115 RMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG 174
R + + + + L+ L S+ S VG+ G V G+ I ++ + G
Sbjct: 114 RCLKDTMDERIARMQGGLAILASIGSTAPFVGLFGTVWGIYHALLVIGATGQTSIDQVAG 173
Query: 175 -IIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+ ESLI GL V+IP+ + YN +K ++ FA+ A
Sbjct: 174 PVGESLIMTAFGLFVAIPAVLGYNALTRANKSVVSRLRRFAHGLHAYF 221
>gi|238750907|ref|ZP_04612404.1| TonB complex protein [Yersinia rohdei ATCC 43380]
gi|238710821|gb|EEQ03042.1| TonB complex protein [Yersinia rohdei ATCC 43380]
Length = 336
Score = 202 bits (515), Expect = 3e-50, Method: Composition-based stats.
Identities = 50/216 (23%), Positives = 105/216 (48%), Gaps = 3/216 (1%)
Query: 3 NYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQL 62
GLA MD+S++ ++ + VK ++ L + SI++W+++ K RR+ ++ ++
Sbjct: 95 PQGLA-MDLSVWGMYQHADVVVKAVMIGLVLASIVTWTILFSKGTELFRARRRLQQEHEV 153
Query: 63 FWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIA 122
+ +L+T + ++++ +S ++ + GI++R ++ +A
Sbjct: 154 IGAVTNLDTASERAAAFSTESISSLLLSEAQN-ERLLSAESDDNNGIKERAAFRLERRVA 212
Query: 123 RELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLIS 181
++ + FL ++ + VG+ G V G+M F IA + N+ V PGI E+L++
Sbjct: 213 AISRQMGKGNGFLATIGAISPFVGLFGTVWGIMNSFIGIAHSQTTNLAVVAPGIAEALLA 272
Query: 182 ILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEF 217
LGL +IP+ + YN F + Q+ A +
Sbjct: 273 TALGLVAAIPAVVIYNIFARLIGSYRAQVGDVAAQV 308
>gi|172061160|ref|YP_001808812.1| MotA/TolQ/ExbB proton channel [Burkholderia ambifaria MC40-6]
gi|171993677|gb|ACB64596.1| MotA/TolQ/ExbB proton channel [Burkholderia ambifaria MC40-6]
Length = 243
Score = 202 bits (515), Expect = 3e-50, Method: Composition-based stats.
Identities = 59/228 (25%), Positives = 95/228 (41%), Gaps = 14/228 (6%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
M +YG+A ++ Q + I L + S+LSW VII K N I L R + E
Sbjct: 1 MQSYGIA-------HVWAQGDFVTRAIAITLLVMSVLSWIVIIVKGWNVIRLNRLTKNAE 53
Query: 61 QLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRID------ 114
Q FW E K L + F++ K++ D ++ + DR+D
Sbjct: 54 QAFWHSDDFEDGIKKLGLTASTPSDNPFLALALSGKEAADHHHQTQPHLHDRMDVSDWVT 113
Query: 115 RMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG 174
R + + + + L+ L S+ S VG+ G V G+ I ++ + G
Sbjct: 114 RCLKDTMDEGISRMQAGLAILASIGSTAPFVGLFGTVWGIYHALLVIGATGQTSIDQVAG 173
Query: 175 -IIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+ ESLI GL V+IP+ + YN +K ++ FA+ A
Sbjct: 174 PVGESLIMTAFGLFVAIPAVLGYNALTRANKGVVSKLRRFAHGLHAYF 221
>gi|218927873|ref|YP_002345748.1| MotA/TolQ/ExbB proton channel family protein [Yersinia pestis CO92]
gi|115346484|emb|CAL19358.1| MotA/TolQ/ExbB proton channel family protein [Yersinia pestis CO92]
Length = 237
Score = 202 bits (515), Expect = 3e-50, Method: Composition-based stats.
Identities = 48/211 (22%), Positives = 103/211 (48%), Gaps = 4/211 (1%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
MD+S++ ++ + VK ++ L + SI++W+++ K RR+ R+ ++ +
Sbjct: 1 MDLSVWGMYQNADVVVKGVMIGLVLASIVTWTILFSKGTELFRARRRLRQEHEVIGAVTD 60
Query: 69 LETVCKSLKNHHNIGLAA-IFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
L+T + ++ +++ + A++E + + GI++R ++ +A +
Sbjct: 61 LDTASERAEDFGQGSVSSLLLHEALNE--RLLSIESNDNNGIKERTAFRLERRVAAIGRQ 118
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVS-IPGIIESLISILLGL 186
+ + FL ++ + VG+ G V G+M F IA + N+ PGI E+L++ LGL
Sbjct: 119 MGKGNGFLATIGAISPFVGLFGTVWGIMNSFIGIAHSQTTNLAVIAPGIAEALLATALGL 178
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEF 217
+IP+ + YN F + Q+ A +
Sbjct: 179 VAAIPAVVIYNIFARQIGNYRAQVGDVAAQV 209
>gi|26991982|ref|NP_747407.1| ferric siderophore transport system protein ExbB [Pseudomonas
putida KT2440]
gi|24987113|gb|AAN70871.1|AE016731_6 ferric siderophore transport system protein ExbB [Pseudomonas
putida KT2440]
Length = 320
Score = 202 bits (515), Expect = 3e-50, Method: Composition-based stats.
Identities = 53/224 (23%), Positives = 101/224 (45%), Gaps = 4/224 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
D+S + ++ + VK ++ L I SI++W++ I K + +R+ R
Sbjct: 89 AHDLSPWGMYKNADIVVKIVMIGLAIASIITWTIWIAKGFELMGAKRRLRGEIAQLKKST 148
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+L+ + + N + A+ E + S AR GI++R+ ++ +
Sbjct: 149 TLKEASE-VTNKEGTLAHTLVHDALEEMRLSA--NAREKEGIKERVSFRLERLVHASGRT 205
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
++ L ++ S VG+ G V G+M F IA + N+ V PGI E+L++ LGL
Sbjct: 206 MSSGTGVLATIGSTAPFVGLFGTVWGIMNSFIGIAKTQTTNLAVVAPGIAEALLATALGL 265
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
+IP+ + YN F + Q+ + + ++SR + S
Sbjct: 266 VAAIPAVVIYNVFARSIAGYKAQVSDASAQVLLLVSRDLDHQGS 309
>gi|318604211|emb|CBY25709.1| mota/TolQ/ExbB proton channel family protein [Yersinia
enterocolitica subsp. palearctica Y11]
Length = 336
Score = 202 bits (514), Expect = 3e-50, Method: Composition-based stats.
Identities = 48/216 (22%), Positives = 101/216 (46%), Gaps = 3/216 (1%)
Query: 3 NYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQL 62
GLA MD+S++ ++ + VK ++ L + SI++W+++ K RR+ ++ ++
Sbjct: 95 PQGLA-MDLSVWGMYQHADVVVKGVMIGLVLASIVTWTILFSKGTELFRARRRLQQEHEV 153
Query: 63 FWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIA 122
+ L+ + ++ + + ++ + GI++R ++ +A
Sbjct: 154 IGAVTDLDIASERAAAFSPESISGLLLREAQN-ERLLSAESNDNNGIKERTAFRLERRVA 212
Query: 123 RELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLIS 181
++ + FL ++ + VG+ G V G+M F IA + N+ V PGI E+L++
Sbjct: 213 AISRQMGKGNGFLATIGAISPFVGLFGTVWGIMNSFIGIAHSQTTNLAVVAPGIAEALLA 272
Query: 182 ILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEF 217
LGL +IP+ + YN F + Q+ A +
Sbjct: 273 TALGLVAAIPAVVIYNIFARLIGSYRAQVGDVAAQV 308
>gi|298290782|ref|YP_003692721.1| tonB-system energizer ExbB [Starkeya novella DSM 506]
gi|296927293|gb|ADH88102.1| tonB-system energizer ExbB [Starkeya novella DSM 506]
Length = 357
Score = 202 bits (514), Expect = 3e-50, Method: Composition-based stats.
Identities = 55/220 (25%), Positives = 97/220 (44%), Gaps = 7/220 (3%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
D+S + +FM VK ++ L S+++W+V + KSV + + R + +
Sbjct: 120 PHDLSPWGMFMAADWVVKAVMIGLAFASVVTWTVWLAKSVELTFAKGRLRRALKGYLGAA 179
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
SLE A+ + E K+S D A GI++R+ +
Sbjct: 180 SLEEARDV---GPAGPAGAMLRTTFLEVKRSGDLPAD---GIKERVSISLSRIEVAAGRA 233
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
IT L ++ + VG+ G V G+M F I+ + N+ V PGI E+L++ +GL
Sbjct: 234 ITRGTGLLATIGATAPFVGLFGTVWGIMNSFIGISKAQTTNLAVVAPGIAEALLATAIGL 293
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ + YN F + + + + E +LSR +
Sbjct: 294 VAAIPAVVIYNHFSRQVSGYRLLLGDASAEVLRLLSRDLD 333
>gi|53721402|ref|YP_110387.1| bipolymer transport protein [Burkholderia pseudomallei K96243]
gi|126455682|ref|YP_001074558.1| MotA/TolQ/ExbB proton channel family protein [Burkholderia
pseudomallei 1106a]
gi|134282955|ref|ZP_01769657.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei 305]
gi|167722444|ref|ZP_02405680.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Burkholderia pseudomallei DM98]
gi|167741426|ref|ZP_02414200.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Burkholderia pseudomallei 14]
gi|167818609|ref|ZP_02450289.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Burkholderia pseudomallei 91]
gi|167826986|ref|ZP_02458457.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Burkholderia pseudomallei 9]
gi|167848501|ref|ZP_02474009.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Burkholderia pseudomallei B7210]
gi|167897053|ref|ZP_02484455.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Burkholderia pseudomallei 7894]
gi|167905437|ref|ZP_02492642.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Burkholderia pseudomallei NCTC 13177]
gi|167921671|ref|ZP_02508762.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Burkholderia pseudomallei BCC215]
gi|217424563|ref|ZP_03456061.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei 576]
gi|237508166|ref|ZP_04520881.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei MSHR346]
gi|242311243|ref|ZP_04810260.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei 1106b]
gi|254185301|ref|ZP_04891889.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei 1655]
gi|254187187|ref|ZP_04893701.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei Pasteur 52237]
gi|254198920|ref|ZP_04905338.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei S13]
gi|254262799|ref|ZP_04953664.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei 1710a]
gi|52211816|emb|CAH37815.1| putative bipolymer transport protein [Burkholderia pseudomallei
K96243]
gi|126229450|gb|ABN92863.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei 1106a]
gi|134245603|gb|EBA45695.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei 305]
gi|157934869|gb|EDO90539.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei Pasteur 52237]
gi|169657092|gb|EDS88486.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei S13]
gi|184209536|gb|EDU06579.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei 1655]
gi|217392487|gb|EEC32511.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei 576]
gi|235000371|gb|EEP49795.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei MSHR346]
gi|242134482|gb|EES20885.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei 1106b]
gi|254213801|gb|EET03186.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei 1710a]
Length = 242
Score = 202 bits (514), Expect = 3e-50, Method: Composition-based stats.
Identities = 57/228 (25%), Positives = 96/228 (42%), Gaps = 14/228 (6%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
M +YG+A ++ Q + I L + SILSW VI+ K N I L+R ++ E
Sbjct: 1 MQSYGIA-------HVWAQGDFVTRFIAIALLVMSILSWMVIVIKGWNVIRLKRLSKDAE 53
Query: 61 QLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRID------ 114
Q FW + L + F++ K++ D ++ + DR+D
Sbjct: 54 QSFWHSDDFDEGVDKLGRASSSSQDNPFLALALSGKEAADHHHQTQPHLHDRMDVSDWVT 113
Query: 115 RMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG 174
R + + + + L+ L S+ S VG+ G V G+ I ++ + G
Sbjct: 114 RCLKDTMDEGIARMQGGLAILASIGSTAPFVGLFGTVWGIYHALLVIGATGQTSIDQVAG 173
Query: 175 -IIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+ ESLI GL V+IP+ + YN +K ++ FA+ A
Sbjct: 174 PVGESLIMTAFGLFVAIPAVLGYNALTRANKSVVSRLRRFAHGLHAYF 221
>gi|262373119|ref|ZP_06066398.1| TolQ [Acinetobacter junii SH205]
gi|262313144|gb|EEY94229.1| TolQ [Acinetobacter junii SH205]
Length = 232
Score = 202 bits (514), Expect = 3e-50, Method: Composition-based stats.
Identities = 62/220 (28%), Positives = 109/220 (49%), Gaps = 3/220 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+ I L +Q V+ ++ +L + SI SW +I + + F + F+++FWSG L
Sbjct: 9 LHISDLILQASPVVQLVMLILLLASIYSWYLIAKLHMGFKKAEQDDEHFQKMFWSGAELN 68
Query: 71 TVCKSLK-NHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
T+ + + N GL IF + E+ K + A + I + +R++ V ++R+ +
Sbjct: 69 TLYNNAQLNSKRRGLEDIFYQGLGEFFKLQKRKADTTQTI-EGTERILRVGLSRDQGGLE 127
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCV 188
L L S+ S +G+ G V G+M F +A + ++ PGI E+LI+ +GL
Sbjct: 128 VGLGSLASIGSVAPYIGLFGTVWGIMNAFIGLAAVDQVTLATVAPGIAEALIATAIGLFA 187
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
+IP+ +A+N F + FA E A+L RQ+ G
Sbjct: 188 AIPAVLAFNHFTAKGESIYSDRALFAEEMIALLQRQSIGT 227
>gi|238759130|ref|ZP_04620299.1| TonB complex protein [Yersinia aldovae ATCC 35236]
gi|238702678|gb|EEP95226.1| TonB complex protein [Yersinia aldovae ATCC 35236]
Length = 326
Score = 202 bits (514), Expect = 3e-50, Method: Composition-based stats.
Identities = 49/216 (22%), Positives = 103/216 (47%), Gaps = 3/216 (1%)
Query: 3 NYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQL 62
GLA MD+S++ ++ + VK ++ L + SI++W+++ K RR+ ++ ++
Sbjct: 84 PQGLA-MDLSVWGMYQHADVVVKGVMIGLVLASIVTWTILFSKGTELFRARRRLQQEHEV 142
Query: 63 FWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIA 122
+ L+T + + ++ + + ++ + GI++R ++ +A
Sbjct: 143 IGAVTDLDTASERAEAFTADSISGLLLREAQN-ERLLSAESDDNNGIKERTAFRLERRVA 201
Query: 123 RELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLIS 181
++ + FL ++ + VG+ G V G+M F IA + N+ V PGI E+L++
Sbjct: 202 AIGRQMGKGNGFLATIGAISPFVGLFGTVWGIMNSFIGIAHSQTTNLAVVAPGIAEALLA 261
Query: 182 ILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEF 217
LGL +IP+ + YN F + Q+ A +
Sbjct: 262 TALGLVAAIPAVVIYNIFARLIGSYRAQVGDVAAQV 297
>gi|85713413|ref|ZP_01044410.1| TonB system biopolymer transport component [Idiomarina baltica
OS145]
gi|85692763|gb|EAQ30764.1| TonB system biopolymer transport component [Idiomarina baltica
OS145]
Length = 234
Score = 202 bits (514), Expect = 3e-50, Method: Composition-based stats.
Identities = 66/223 (29%), Positives = 108/223 (48%), Gaps = 3/223 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
++S LF+Q L VK ++ +L S+ W +I Q+ +FE FWSG L
Sbjct: 4 ELSFIDLFLQASLLVKLVMLMLLAMSVWGWVLIFQRKKVIGQAHSDALKFEDRFWSGVDL 63
Query: 70 ETVCKSLKNHH--NIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + + + G+ +F + E+ + + + R M VA ARELE+
Sbjct: 64 ARLYQEISARAKNSRGMELLFHAGFKEFARLSNHDNADSQTRVEGAFRAMRVAHARELEK 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ L L ++ S +G+ G V G+M F ++ + + PGI E+LI+ +GL
Sbjct: 124 LDANLGILATIGSISPYIGLFGTVWGIMNAFIALGAVKQATLAMVAPGIAEALIATAMGL 183
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNI 229
+IP+ IAYN+F +K Q F +EF AIL RQ+ N+
Sbjct: 184 FAAIPAVIAYNRFTNRVEKVDNQYMNFIDEFVAILQRQSLSNV 226
>gi|585111|sp|Q05605|EXBB_PSEPU RecName: Full=Biopolymer transport protein exbB
gi|49193|emb|CAA49714.1| inner-membrane protein ExbB [Pseudomonas putida]
Length = 329
Score = 202 bits (514), Expect = 4e-50, Method: Composition-based stats.
Identities = 56/229 (24%), Positives = 104/229 (45%), Gaps = 5/229 (2%)
Query: 3 NYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQL 62
G+A D+S + ++ + VK ++ L I SI++W++ I K + +R+ R
Sbjct: 94 TLGMA-HDLSPWGMYKNADIVVKIVMIGLAIASIITWTIWIAKGFELMGAKRRLRGEIAQ 152
Query: 63 FWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIA 122
SL+ + + N + A+ E + S R GI++R+ ++ +A
Sbjct: 153 LKKSASLKEASE-VSNKEGTLAHTLVHDALEEMRLSA--NTREKEGIKERVAFRLERLVA 209
Query: 123 RELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLIS 181
++ L ++ S VG+ G V G+M F IA + N+ V PGI E+L++
Sbjct: 210 ASGRNMSSGTGVLATIGSTAPFVGLFGTVWGIMNSFIGIAKTQTTNLAVVAPGIAEALLA 269
Query: 182 ILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
LGL +IP+ + YN F + Q+ + + ++SR + S
Sbjct: 270 TALGLVAAIPAVVIYNVFARSIAGYKAQVSDASAQVLLLVSRDLDHQGS 318
>gi|148284677|ref|YP_001248767.1| transport protein [Orientia tsutsugamushi str. Boryong]
gi|146740116|emb|CAM80289.1| transport protein [Orientia tsutsugamushi str. Boryong]
Length = 229
Score = 202 bits (514), Expect = 4e-50, Method: Composition-based stats.
Identities = 55/219 (25%), Positives = 113/219 (51%), Gaps = 1/219 (0%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
ISI + F+ + K ++ L I SI SW++I K +F ++++ F +L S Q ++
Sbjct: 11 ISIISAFLSADIICKTVMVTLIIASIWSWAIIFYKYYHFNNIKKEINTFNKLLQSNQQVD 70
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
+ + ++ ++++ ++E+K + A + ++DR+ +++ + E++
Sbjct: 71 ELYSKINKNNGNSISSMLTIVLNEYKYEHNVTAGNNSNLKDRLLYTIELTKNQISEQLET 130
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVS 189
L L ++SS +G+LG V G+M FQ+IA + ++ V PGI E+L++ +GL +
Sbjct: 131 YLIVLATISSTAPFIGLLGTVWGIMHSFQAIAATKNTSIAVVAPGIAEALLATAIGLFAA 190
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
IP+ I YN ++E F +F +L + +
Sbjct: 191 IPAGIFYNILTHKLSLVESKLENFIRKFYTVLCKTIDKR 229
>gi|187922767|ref|YP_001894409.1| protein TolQ [Burkholderia phytofirmans PsJN]
gi|187713961|gb|ACD15185.1| protein TolQ [Burkholderia phytofirmans PsJN]
Length = 225
Score = 201 bits (513), Expect = 4e-50, Method: Composition-based stats.
Identities = 74/222 (33%), Positives = 115/222 (51%), Gaps = 3/222 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
D+SI +L + L + ++ LL + S+LSW+ I +K R Q FE+ FWSG
Sbjct: 4 TQDLSIVSLVLNASLLAQAVMALLLLLSLLSWTFIFRKWFAIRRARAQTERFERDFWSGG 63
Query: 68 SLETVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
L+ + +S N+ + L IF S M E+ K +K I D R M A RE+
Sbjct: 64 DLQALYQSAANNRHTIGALERIFESGMREFLKGKEKRLNDSGAILDGARRAMRAAFQREM 123
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV-SIPGIIESLISILL 184
+ + L+FL S+ S +G+ G V G+M F+ +A + PGI E+L + +
Sbjct: 124 DVLEANLAFLASVGSVSPYIGLFGTVWGIMNAFRGLANVQQATLANVAPGIAEALTATAI 183
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
GL +IP+ +AYN++ D + A++ E F EFS IL RQ +
Sbjct: 184 GLFAAIPAVVAYNRYAHDIDRLAIRFETFIEEFSNILQRQAQ 225
>gi|134296384|ref|YP_001120119.1| MotA/TolQ/ExbB proton channel [Burkholderia vietnamiensis G4]
gi|134139541|gb|ABO55284.1| outer membrane transport energization protein ExbB [Burkholderia
vietnamiensis G4]
Length = 243
Score = 201 bits (513), Expect = 4e-50, Method: Composition-based stats.
Identities = 58/228 (25%), Positives = 97/228 (42%), Gaps = 14/228 (6%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
M +YG+A ++ Q + I L + S+LSW VI+ K N I L R + E
Sbjct: 1 MQSYGIA-------HVWAQGDFVTRAIAITLLVMSVLSWIVIVVKGWNVIRLNRLTKNAE 53
Query: 61 QLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRID------ 114
Q FW + K L + F++ K++ D ++ + DR+D
Sbjct: 54 QAFWHSDDFDDGIKKLGLTASTPGDNPFLALALSGKEAADHHHQTQPHLHDRMDVSDWVT 113
Query: 115 RMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG 174
R + + + + L+ L S+ S VG+ G V G+ +I ++ + G
Sbjct: 114 RCLKDTMDEGISRMQAGLAILASIGSTAPFVGLFGTVWGIYHALLAIGATGQTSIDQVAG 173
Query: 175 -IIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+ ESLI GL V+IP+ + YN +K A ++ FA+ A
Sbjct: 174 PVGESLIMTAFGLFVAIPAVLGYNALTRANKGIASKLRRFAHGLHAYF 221
>gi|238796986|ref|ZP_04640490.1| TonB complex protein [Yersinia mollaretii ATCC 43969]
gi|238719246|gb|EEQ11058.1| TonB complex protein [Yersinia mollaretii ATCC 43969]
Length = 332
Score = 201 bits (513), Expect = 4e-50, Method: Composition-based stats.
Identities = 49/216 (22%), Positives = 103/216 (47%), Gaps = 3/216 (1%)
Query: 3 NYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQL 62
GLA MD+S++ ++ + VK ++ L + SI++W+++ K RR+ + ++
Sbjct: 91 PQGLA-MDLSVWGMYQHADVVVKGVMIGLVLASIVTWTILFSKGTELFRARRRLLQEHEV 149
Query: 63 FWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIA 122
+ L+T + + ++++ + ++ + GI++R ++ +A
Sbjct: 150 IGAVTDLDTASERAEVFAPDSISSLLLREAQN-ERLLSAESNDNNGIKERTAFRLERRVA 208
Query: 123 RELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLIS 181
++ + FL ++ + VG+ G V G+M F IA + N+ V PGI E+L++
Sbjct: 209 AIGRQMGKGNGFLATIGAISPFVGLFGTVWGIMNSFIGIAHSQTTNLAVVAPGIAEALLA 268
Query: 182 ILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEF 217
LGL +IP+ + YN F + Q+ A +
Sbjct: 269 TALGLVAAIPAVVIYNIFARLIGSYRAQVGDVAAQV 304
>gi|94311216|ref|YP_584426.1| MotA/TolQ/ExbB proton channel [Cupriavidus metallidurans CH34]
gi|93355068|gb|ABF09157.1| biopolymer transport exbB protein MotA/TolQ/ExbB proton channel
[Cupriavidus metallidurans CH34]
Length = 243
Score = 201 bits (513), Expect = 4e-50, Method: Composition-based stats.
Identities = 48/217 (22%), Positives = 93/217 (42%), Gaps = 3/217 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
+ D+ + L+ Q ++ +L I S+LSW VI+ K+ + I L++ E+ FW
Sbjct: 1 MQDLGLSHLWSQGDFVMRATAIILLIMSLLSWIVILTKAWDLIRLKKMAHGAEKRFWHSD 60
Query: 68 SLETVCKSLKNHHNIGLAAIFMSA--MSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
+ +L + + ++ ++ ++ + I D + R + AI +
Sbjct: 61 DFDHALDTLGANDANPFRMLAVTGREAAQHHRASQPQLHDALDISDWLTRSLKSAIDEAV 120
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILL 184
+ L+ L S+ S VG+ G V G+ I + + G + E+LI
Sbjct: 121 ARMQSGLAILASVGSTAPFVGLFGTVWGIYHALIGIGASGVPTIDKVAGPVGEALIMTAF 180
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
GL V+IP+ + YN +K ++ FA++ A
Sbjct: 181 GLAVAIPAVLGYNALSRGNKGVISKLNRFAHDLHAYF 217
>gi|53716290|ref|YP_106355.1| MotA/TolQ/ExbB proton channel family protein [Burkholderia mallei
ATCC 23344]
gi|67642803|ref|ZP_00441555.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
mallei GB8 horse 4]
gi|121596962|ref|YP_990399.1| MotA/TolQ/ExbB proton channel family protein [Burkholderia mallei
SAVP1]
gi|124382037|ref|YP_001024894.1| MotA/TolQ/ExbB proton channel family protein [Burkholderia mallei
NCTC 10229]
gi|126446944|ref|YP_001079235.1| MotA/TolQ/ExbB proton channel family protein [Burkholderia mallei
NCTC 10247]
gi|167002073|ref|ZP_02267863.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
mallei PRL-20]
gi|254176448|ref|ZP_04883106.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
mallei ATCC 10399]
gi|254203338|ref|ZP_04909699.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
mallei FMH]
gi|254205217|ref|ZP_04911570.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
mallei JHU]
gi|254356029|ref|ZP_04972306.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
mallei 2002721280]
gi|52422260|gb|AAU45830.1| MotA/TolQ/ExbB proton channel family protein [Burkholderia mallei
ATCC 23344]
gi|121224760|gb|ABM48291.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
mallei SAVP1]
gi|126239798|gb|ABO02910.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
mallei NCTC 10247]
gi|147745577|gb|EDK52656.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
mallei FMH]
gi|147754803|gb|EDK61867.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
mallei JHU]
gi|148025012|gb|EDK83181.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
mallei 2002721280]
gi|160697490|gb|EDP87460.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
mallei ATCC 10399]
gi|238524001|gb|EEP87436.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
mallei GB8 horse 4]
gi|243062230|gb|EES44416.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
mallei PRL-20]
gi|261826614|gb|ABN00385.2| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
mallei NCTC 10229]
Length = 242
Score = 201 bits (513), Expect = 5e-50, Method: Composition-based stats.
Identities = 57/228 (25%), Positives = 97/228 (42%), Gaps = 14/228 (6%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
M +YG+A ++ Q + I L + SILSW VI+ K N I L+R ++ E
Sbjct: 1 MQSYGIA-------HVWAQGDFVTRFIAIALLVMSILSWMVIVIKGWNVIRLKRLSKDAE 53
Query: 61 QLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRID------ 114
Q FW + L + F++ K++ D ++ ++DR+D
Sbjct: 54 QSFWHSDDFDEGVDKLGRASSSSQDNPFLALALSGKEAADHHHQTQPHLRDRMDVSDWVT 113
Query: 115 RMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG 174
R + + + + L+ L S+ S VG+ G V G+ I ++ + G
Sbjct: 114 RCLKDTMDEGIARMQGGLAILASIGSTAPFVGLFGTVWGIYHALLVIGATGQTSIDQVAG 173
Query: 175 -IIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+ ESLI GL V+IP+ + YN +K ++ FA+ A
Sbjct: 174 PVGESLIMTAFGLFVAIPAVLGYNALTRANKSVVSRLRRFAHGLHAYF 221
>gi|253990989|ref|YP_003042345.1| biopolymer transport exbb protein [Photorhabdus asymbiotica subsp.
asymbiotica ATCC 43949]
gi|253782439|emb|CAQ85603.1| biopolymer transport exbb protein [Photorhabdus asymbiotica]
Length = 386
Score = 201 bits (513), Expect = 5e-50, Method: Composition-based stats.
Identities = 44/210 (20%), Positives = 97/210 (46%), Gaps = 2/210 (0%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
D+SI+ ++ + VK ++ L I S+++W++ K + R+ R+ + +
Sbjct: 161 ATDLSIWGMYQNADVVVKTVMIGLVIASVITWALFFSKGAELLAAGRRLRKEQLALAEVK 220
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
SL+ + + + ++ + +S + ++ + ++R ++ ++A
Sbjct: 221 SLDQAAEMAEGFSKLSISRMLLSEVQAERQLSSESL-DLNSTKERASFRLERSVAAISRH 279
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
+ +L ++ + VG+ G V G+M F IA + N+ V PGI E+L++ LGL
Sbjct: 280 MGRGNGYLATIGAISPFVGLFGTVWGIMNSFIGIAHSQTTNLAVVAPGIAEALLATALGL 339
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANE 216
+IP+ + YN F + Q+ A +
Sbjct: 340 VAAIPAVVIYNIFARMIASYRGQVGDVAAQ 369
>gi|146279028|ref|YP_001169187.1| MotA/TolQ/ExbB proton channel [Rhodobacter sphaeroides ATCC 17025]
gi|145557269|gb|ABP71882.1| MotA/TolQ/ExbB proton channel [Rhodobacter sphaeroides ATCC 17025]
Length = 355
Score = 201 bits (513), Expect = 5e-50, Method: Composition-based stats.
Identities = 50/225 (22%), Positives = 102/225 (45%), Gaps = 3/225 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
D++ + +F V+ ++ +L S ++W+V++ K V RR+
Sbjct: 129 PHDLTPWGMFEAAHWVVQAVMIVLAAASFVTWTVLLFKLVEIAIARRRLASTAGTVRGSA 188
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKS-CDKGARSPIGIQDRIDRMMDVAIARELE 126
+L+ + L + A + +A E ++S G+++R+ +++ A+ E
Sbjct: 189 TLDEAVQRLSGRRD-PAAFMARAAFEELQRSDAALDLAGTAGLKERVRSILERVEAQAGE 247
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLG 185
+ + L ++ S G VG+ G V G+M F I+ + N+ V PGI E+L++ LG
Sbjct: 248 RLRRGIGLLATIGSVGPFVGLFGTVWGIMNAFIGISQSQTTNLAVVAPGIAEALLATGLG 307
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
L +IP+ + YN F+ + + + +LSR + +
Sbjct: 308 LVAAIPAVVIYNHFVRSIASWRLSLADAGAAVERMLSRDLDFRTA 352
>gi|226952121|ref|ZP_03822585.1| Tol-Pal system TolQ protein [Acinetobacter sp. ATCC 27244]
gi|226837130|gb|EEH69513.1| Tol-Pal system TolQ protein [Acinetobacter sp. ATCC 27244]
Length = 232
Score = 201 bits (513), Expect = 5e-50, Method: Composition-based stats.
Identities = 65/220 (29%), Positives = 112/220 (50%), Gaps = 3/220 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+ I L +Q V+ ++ +L + SI SW VI + ++F + F+++FWSG L
Sbjct: 9 MHISDLILQASPVVQLVMLILLLASIYSWYVIAKLHMSFKKTGQDDEHFQKMFWSGAELN 68
Query: 71 TVCKSLK-NHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
T+ + + N GL +F +SE+ K + A + I + +RM+ V ++RE +
Sbjct: 69 TLYNNAQLNSKRNGLEDVFYQGLSEFFKLKKRKADTTQTI-EGTERMLRVGLSREQGGLE 127
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCV 188
+ L L S+ S +G+ G V G+M F +A + ++ PGI E+LI+ +GL
Sbjct: 128 QSLGVLASIGSVAPYIGLFGTVWGIMNAFIGLAAVDQVTLATVAPGIAEALIATAIGLFA 187
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
+IP+ +A+N F + FA E A+L RQ+ G
Sbjct: 188 AIPAVLAFNHFTAKGEAIYSDRALFAEEMVALLQRQSIGT 227
>gi|253686750|ref|YP_003015940.1| tonB-system energizer ExbB [Pectobacterium carotovorum subsp.
carotovorum PC1]
gi|251753328|gb|ACT11404.1| tonB-system energizer ExbB [Pectobacterium carotovorum subsp.
carotovorum PC1]
Length = 336
Score = 201 bits (513), Expect = 5e-50, Method: Composition-based stats.
Identities = 49/223 (21%), Positives = 101/223 (45%), Gaps = 4/223 (1%)
Query: 6 LAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS 65
L D+S++ ++ VK ++ L + S+++W++ KSV +R+ R
Sbjct: 97 LMKTDLSVWGMYQHADAVVKTVMIGLLLASVITWAIFFSKSVEMSGAKRRLRREYLALEQ 156
Query: 66 GQSLETVCKSLKNHHNIGLA-AIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARE 124
++L+ ++ +A + + A +E + S + GI++R ++ +A
Sbjct: 157 AKTLDDALETADAFKTGSVAQQLLVDAQNELELSAR--SDDNNGIKERTAFRLERRVAAT 214
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISIL 183
+ +L ++ + VG+ G V G+M F IA + N+ V PGI E+L++
Sbjct: 215 GRHMGRGNGYLATVGAVAPFVGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGIAEALLATA 274
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+GL +IP+ + YN F + + A + + SR +
Sbjct: 275 IGLVAAIPAVVIYNVFARSIASYKAMVGDVAAQVLLLQSRDLD 317
>gi|167913730|ref|ZP_02500821.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Burkholderia pseudomallei 112]
gi|254296819|ref|ZP_04964273.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei 406e]
gi|157806604|gb|EDO83774.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei 406e]
Length = 242
Score = 201 bits (513), Expect = 5e-50, Method: Composition-based stats.
Identities = 57/228 (25%), Positives = 96/228 (42%), Gaps = 14/228 (6%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
M +YG+A ++ Q + I L + SILSW VI+ K N I L+R ++ E
Sbjct: 1 MQSYGIA-------HVWAQGDFVTRFIAIALLVMSILSWMVIVIKGWNVIRLKRLSKDAE 53
Query: 61 QLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRID------ 114
Q FW + L + F++ K++ D ++ + DR+D
Sbjct: 54 QSFWHSDDFDEGVDKLGRASSSSQDNPFLALALSGKEAADHHHQTQPHLHDRMDVSDWVT 113
Query: 115 RMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG 174
R + + + + L+ L S+ S VG+ G V G+ I ++ + G
Sbjct: 114 RCLKDTMDEGIARMQGGLAILASIGSTAPFVGLFGTVWGIYHALLMIGATGQTSIDQVAG 173
Query: 175 -IIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+ ESLI GL V+IP+ + YN +K ++ FA+ A
Sbjct: 174 PVGESLIMTAFGLFVAIPAVLGYNALTRANKSVVSRLRRFAHGLHAYF 221
>gi|284006382|emb|CBA71618.1| biopolymer transport protein [Arsenophonus nasoniae]
Length = 312
Score = 201 bits (513), Expect = 5e-50, Method: Composition-based stats.
Identities = 50/219 (22%), Positives = 101/219 (46%), Gaps = 2/219 (0%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
D+SI++++ + VK ++ L + SI++W++ K + I RQ ++ +Q +S
Sbjct: 87 QDLSIWSMYQHADMVVKAVMLGLIVASIITWALFFSKGIEMIGAYRQLQKEQQKLSKVKS 146
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
L+ + + +K+ G+ G +DR ++ A+A +
Sbjct: 147 LDDAIGIAATFKKNSVTRKLYDEVVA-EKTLSAGSHDLNGTKDRASFRLERAVASISRYM 205
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
+L ++ + +G+ G V G+M F IA + N+ V PGI E+L++ +GL
Sbjct: 206 GRGNGYLATIGAISPFIGLFGTVWGIMNSFIGIAHSQTTNLAVVAPGIAEALLATAIGLV 265
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ + YN F + Q+ A + + +L R +
Sbjct: 266 AAIPAVVIYNLFARMINTYRGQLGDVAAQATVLLGRDLD 304
>gi|73541923|ref|YP_296443.1| MotA/TolQ/ExbB proton channel [Ralstonia eutropha JMP134]
gi|72119336|gb|AAZ61599.1| MotA/TolQ/ExbB proton channel [Ralstonia eutropha JMP134]
Length = 242
Score = 201 bits (512), Expect = 5e-50, Method: Composition-based stats.
Identities = 47/217 (21%), Positives = 95/217 (43%), Gaps = 3/217 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
+ D+ + L+ Q ++ +L I S+LSW VI+ K+ + I L++ E+ FW
Sbjct: 1 MQDLGLSHLWSQGDFVMRATAIILLIMSLLSWIVILTKAWDLIRLKKMAHGAEKRFWHSD 60
Query: 68 SLETVCKSLKNHHNIGLAAIFMSA--MSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
+ ++L ++ + ++ ++ ++ + I D + R + +I +
Sbjct: 61 DFDHALETLGSNDANPFRTLAIAGKEAAQHHRASQPQLHDVMDISDWLTRSLKSSIDDAV 120
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILL 184
+ L+ L S+ S VG+ G V G+ I + + G + E+LI
Sbjct: 121 AHMQSGLAVLASVGSTAPFVGLFGTVWGIYHALIGIGASGVPTIDKVAGPVGEALIMTAF 180
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
GL V+IP+ + YN +K ++ FA++ A
Sbjct: 181 GLAVAIPAVLGYNALTRGNKSVISKLNRFAHDLHAYF 217
>gi|325275151|ref|ZP_08141124.1| TonB-system energizer ExbB type-1 [Pseudomonas sp. TJI-51]
gi|324099723|gb|EGB97596.1| TonB-system energizer ExbB type-1 [Pseudomonas sp. TJI-51]
Length = 321
Score = 201 bits (512), Expect = 5e-50, Method: Composition-based stats.
Identities = 52/224 (23%), Positives = 101/224 (45%), Gaps = 4/224 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
D+S + ++ + VK ++ L I SI++W++ I K + +R+ R
Sbjct: 90 AHDLSPWGMYKNADIVVKIVMIGLAIASIITWTIWIAKGFELMGAKRRLRGEIAQLKKAT 149
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+L+ + + + + A+ E + S AR GI++R+ ++ +
Sbjct: 150 TLKDASE-VSSKEGTLAHTLVHDALEEMRLSA--NAREKEGIKERVSFRLERLVHASGRN 206
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
++ L ++ S VG+ G V G+M F IA + N+ V PGI E+L++ LGL
Sbjct: 207 MSSGTGVLATIGSTAPFVGLFGTVWGIMNSFIGIAKTQTTNLAVVAPGIAEALLATALGL 266
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
+IP+ + YN F + Q+ + + ++SR + S
Sbjct: 267 VAAIPAVVIYNVFARSIAGYKAQVSDASAQVLLLVSRDLDHQGS 310
>gi|206580290|ref|YP_002236568.1| TonB-system energizer ExbB [Klebsiella pneumoniae 342]
gi|238896519|ref|YP_002921259.1| biopolymer transport protein ExbB [Klebsiella pneumoniae
NTUH-K2044]
gi|288933551|ref|YP_003437610.1| tonB-system energizer ExbB [Klebsiella variicola At-22]
gi|206569348|gb|ACI11124.1| TonB-system energizer ExbB [Klebsiella pneumoniae 342]
gi|238548841|dbj|BAH65192.1| TonB-dependent enterochelin uptake/biopolymer transport protein
[Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044]
gi|288888280|gb|ADC56598.1| tonB-system energizer ExbB [Klebsiella variicola At-22]
Length = 243
Score = 201 bits (512), Expect = 5e-50, Method: Composition-based stats.
Identities = 51/227 (22%), Positives = 102/227 (44%), Gaps = 4/227 (1%)
Query: 6 LAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS 65
L D+S++ ++ + VK ++ L + S+++W++ K + +R+ + +Q
Sbjct: 5 LMQADLSVWGMYHHADIVVKVVMIGLILASVVTWAIFFGKGAEILASKRRLKREQQQLAE 64
Query: 66 GQSLETVCKSLKNHHNIGL-AAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARE 124
+SL+ L + A +E + S GA GI++R ++ +A
Sbjct: 65 ARSLDQASDIASAFEAKSLTTQLINEAQNELELSA--GAEDNEGIKERTGFRLERRVAAV 122
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISIL 183
+ +L ++ + VG+ G V G+M F IA + N+ V PGI E+L++
Sbjct: 123 GRHMGRGNGYLATIGAISPFVGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGIAEALLATA 182
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
+GL +IP+ + YN F + + A + + SR + + S
Sbjct: 183 IGLFAAIPAVVIYNIFARMIGSYKASLGDVAAQVLLLQSRDLDLSAS 229
>gi|92113973|ref|YP_573901.1| MotA/TolQ/ExbB proton channel [Chromohalobacter salexigens DSM
3043]
gi|91797063|gb|ABE59202.1| Cell division and transport-associated protein TolQ
[Chromohalobacter salexigens DSM 3043]
Length = 225
Score = 201 bits (512), Expect = 6e-50, Method: Composition-based stats.
Identities = 69/220 (31%), Positives = 114/220 (51%), Gaps = 3/220 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+SI L M L V+ ++ LL S+ SW VI Q+ + +R+FE FWSG L
Sbjct: 1 MSIPHLIMNASLVVQLVMLLLLAASVASWIVIFQRGFALRRAEKAYRDFEDRFWSGVDLN 60
Query: 71 TVCKSL-KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+ + L ++G +F S E+ + K +S + + + R VA++RE + +
Sbjct: 61 ELYRELPAEQESLGAEHVFRSGFREFNRLMAK-TQSTEAVLEGVQRGQRVALSREEDRLQ 119
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCV 188
L+FL +++SA +G+ G V G+MG FQS++ + P I E+L++ +GL
Sbjct: 120 LHLTFLATVASATPYIGLFGTVWGIMGSFQSLSMAQQATLSTVAPWIAEALVATAMGLFA 179
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
+IP+ I YN+ + + + E FA EF AIL R +G
Sbjct: 180 AIPAVIFYNRLSAHATRLLGKYENFAEEFHAILHRNLQGR 219
>gi|50119317|ref|YP_048484.1| biopolymer transport protein [Pectobacterium atrosepticum SCRI1043]
gi|49609843|emb|CAG73277.1| biopolymer transport protein [Pectobacterium atrosepticum SCRI1043]
Length = 304
Score = 201 bits (512), Expect = 6e-50, Method: Composition-based stats.
Identities = 49/223 (21%), Positives = 100/223 (44%), Gaps = 4/223 (1%)
Query: 6 LAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS 65
L D+S++ ++ VK ++ L + S+++W++ KSV +R+ R
Sbjct: 65 LMKTDLSVWGMYQHADAVVKTVMIGLLLASVITWAIFFSKSVEMSGAKRRLRREYLALEQ 124
Query: 66 GQSLETVCKSLKNHHNIGLAAIFMS-AMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARE 124
++L+ ++ +A ++ A +E S + GI++R ++ +A
Sbjct: 125 AKTLDDALETADAFKTGSVAQQLLADAQNELDLSAR--SDDNNGIKERTAFRLERRVAAT 182
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISIL 183
+ +L ++ + VG+ G V G+M F IA + N+ V PGI E+L++
Sbjct: 183 GRHMGRGNGYLATVGAVAPFVGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGIAEALLATA 242
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+GL +IP+ + YN F + + A + + SR +
Sbjct: 243 IGLVAAIPAVVIYNVFARSIAGYKATVGDVAAQVLLLQSRDLD 285
>gi|239816090|ref|YP_002945000.1| protein TolQ [Variovorax paradoxus S110]
gi|239802667|gb|ACS19734.1| protein TolQ [Variovorax paradoxus S110]
Length = 240
Score = 201 bits (512), Expect = 6e-50, Method: Composition-based stats.
Identities = 72/223 (32%), Positives = 113/223 (50%), Gaps = 3/223 (1%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
D+SI L + V+ ++ LL I SI SW+ II+K +R +FE+ FWSG S
Sbjct: 3 QDLSIINLLLHASFVVQLVVLLLVIVSIASWAAIIRKYFALRRMRALNDDFEREFWSGTS 62
Query: 69 LETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
L + S + + IF S M E++K ++ + D R M + REL+
Sbjct: 63 LNELFASAAQNAKFAGPMERIFASGMREYQKLRERHVSDAPTLLDGARRAMRASFQRELD 122
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLG 185
+ LSFL ++ S VG+ G V G+M F +A + ++ PGI E+L++ +G
Sbjct: 123 AAEQNLSFLATVGSVSPYVGLFGTVWGIMHAFTGLAALAQVTLATVAPGIAEALVATAIG 182
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
L +IP+ + YN+F + K A+ +E + EFS IL R N
Sbjct: 183 LFAAIPAVVGYNRFAREIDKIAIALETYIEEFSNILQRNLSAN 225
>gi|319794184|ref|YP_004155824.1| protein tolq [Variovorax paradoxus EPS]
gi|315596647|gb|ADU37713.1| protein TolQ [Variovorax paradoxus EPS]
Length = 240
Score = 201 bits (512), Expect = 6e-50, Method: Composition-based stats.
Identities = 72/220 (32%), Positives = 113/220 (51%), Gaps = 3/220 (1%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
D+SI L + V+ ++ LL I SI SW+ II+K +R +FE+ FWSG S
Sbjct: 3 QDLSIINLLLHASFVVQMVVLLLVIVSIASWAAIIRKYFALRRMRALNDDFEREFWSGTS 62
Query: 69 LETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
L + S + + IF S M E++K ++ P + D R M + REL+
Sbjct: 63 LNELFASAAQNAKFAGPMERIFASGMREYQKLRERHVSDPATLLDGARRAMRASFQRELD 122
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLG 185
+ LSFL ++ S VG+ G V G+M F +A + ++ PGI E+L++ +G
Sbjct: 123 AAEQNLSFLATVGSVSPYVGLFGTVWGIMHAFTGLAALTQVTLATVAPGIAEALVATAIG 182
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
L +IP+ + YN+F + K A+ +E + EFS IL R
Sbjct: 183 LFAAIPAVVGYNRFAREIDKIAIALETYIEEFSNILQRNL 222
>gi|209517623|ref|ZP_03266461.1| protein TolQ [Burkholderia sp. H160]
gi|209501919|gb|EEA01937.1| protein TolQ [Burkholderia sp. H160]
Length = 225
Score = 201 bits (512), Expect = 7e-50, Method: Composition-based stats.
Identities = 73/222 (32%), Positives = 115/222 (51%), Gaps = 3/222 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
D+SI +L + L + ++ LL + S+LSW+ I +K R Q FE+ FWSG
Sbjct: 4 TQDLSIVSLVLNASLLAQAVMALLLLLSLLSWTFIFRKWFAIRRARAQTERFERDFWSGG 63
Query: 68 SLETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
L+ + +S N+ + L IF S M E+ K +K I D R M + RE+
Sbjct: 64 DLQALYQSAANNRHRIGALERIFESGMREFLKGKEKRLNDSGAILDGARRAMRASFQREM 123
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV-SIPGIIESLISILL 184
+ + L+FL S+ S +G+ G V G+M F+ +A + PGI E+L + +
Sbjct: 124 DVLEANLAFLASVGSVSPYIGLFGTVWGIMNAFRGLANVQQATLANVAPGIAEALTATAI 183
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
GL +IP+ +AYN++ D + A++ E F EFS IL RQ +
Sbjct: 184 GLFAAIPAVVAYNRYAHDIDRLAIRFETFIEEFSNILQRQAQ 225
>gi|330721826|gb|EGG99800.1| MotA/TolQ/ExbB proton channel family protein [gamma proteobacterium
IMCC2047]
Length = 239
Score = 201 bits (512), Expect = 7e-50, Method: Composition-based stats.
Identities = 63/195 (32%), Positives = 107/195 (54%), Gaps = 3/195 (1%)
Query: 39 WSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNH--HNIGLAAIFMSAMSEWK 96
W +I Q+S R+ +FE+ FWSG L + + N G+ IF + + E+
Sbjct: 33 WVMIFQRSRFLRHARKTLDKFEEQFWSGIDLSQLYVEINARINPNSGVENIFGAGLKEYT 92
Query: 97 KSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMG 156
+ + A I + + R+M VA+ARE E++ + LSFL ++ S VG+ G V G+M
Sbjct: 93 RLRSRIASDADAIINGVQRVMRVALAREEEKLEKHLSFLATVGSISPYVGLFGTVWGIMN 152
Query: 157 FFQSIAGYYSNNVVSI-PGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFAN 215
F+ +A + ++ PGI E+L++ +GL +IP+ IAYN++ ++ A + E FA
Sbjct: 153 SFRGLANVQQATLATVAPGISEALVATAMGLFAAIPAVIAYNRYSAEADNLAGRYETFAE 212
Query: 216 EFSAILSRQTEGNIS 230
EFS+IL R+ + +
Sbjct: 213 EFSSILHRKVHDSQA 227
>gi|71735760|ref|YP_272498.1| TonB system transport protein ExbB1 [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|71556313|gb|AAZ35524.1| TonB system transport protein ExbB1 [Pseudomonas syringae pv.
phaseolicola 1448A]
Length = 314
Score = 201 bits (511), Expect = 7e-50, Method: Composition-based stats.
Identities = 55/226 (24%), Positives = 104/226 (46%), Gaps = 5/226 (2%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N+ G+A D+S + ++ + VK ++ L I SI++W++ I K + +R+ R
Sbjct: 74 NSLGMA-HDLSPWGMYQNAEVVVKAVMIGLAIASIITWTIWISKGFELLGAKRRLRGEIV 132
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
+SL + + + A+ E + S +R GI++R+ ++ +
Sbjct: 133 NLKKARSLNEASSTASKEGTLA-HLLVHDALEEMRLSA--NSREREGIKERVSFRLERLV 189
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLI 180
A ++ L ++ S VG+ G V G+M F IA + N+ V PGI E+L+
Sbjct: 190 AACGRNMSMGTGVLATIGSTAPFVGLFGTVWGIMNSFIGIAKTQTTNLAVVAPGIAEALL 249
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+ LGL +IP+ + YN F + Q+ + ++SR +
Sbjct: 250 ATALGLVAAIPAVVIYNVFARSIAGYKAQVSDASAHVLLLVSRDLD 295
>gi|167565058|ref|ZP_02357974.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Burkholderia oklahomensis EO147]
Length = 243
Score = 201 bits (511), Expect = 7e-50, Method: Composition-based stats.
Identities = 58/228 (25%), Positives = 98/228 (42%), Gaps = 14/228 (6%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
M +YG+A ++ Q + I L + SILSW VI+ K N I L+R ++ E
Sbjct: 1 MQSYGIA-------HVWAQGDFVTRAIAIALLVMSILSWMVIVIKGWNVIRLKRLSKDAE 53
Query: 61 QLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRID------ 114
Q FW E K L + + F++ +++ D ++ + DR+D
Sbjct: 54 QSFWHSDDFEEGVKKLGSTSSSTQDNPFLALALSGQEAADHHHQTQPHLHDRMDVSDWVT 113
Query: 115 RMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG 174
R + + + + L+ L S+ S VG+ G V G+ I ++ + G
Sbjct: 114 RCLKDTMDEGIARMQGGLAILASIGSTAPFVGLFGTVWGIYHALLVIGATGQTSIDQVAG 173
Query: 175 -IIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+ ESLI GL V+IP+ + YN +K ++ FA+ A
Sbjct: 174 PVGESLIMTAFGLFVAIPAVLGYNALTRANKSIVSRLRRFAHGLHAYF 221
>gi|238789157|ref|ZP_04632945.1| TonB complex protein [Yersinia frederiksenii ATCC 33641]
gi|238722689|gb|EEQ14341.1| TonB complex protein [Yersinia frederiksenii ATCC 33641]
Length = 333
Score = 201 bits (511), Expect = 7e-50, Method: Composition-based stats.
Identities = 49/216 (22%), Positives = 103/216 (47%), Gaps = 3/216 (1%)
Query: 3 NYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQL 62
GLA MD+S++ ++ + VK ++ L + SI++W+++ K RR+ ++ ++
Sbjct: 92 PEGLA-MDLSVWGMYQHADVVVKGVMIGLVLASIVTWTILFSKGTELFRARRRLQQEHEV 150
Query: 63 FWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIA 122
+ L+T + + ++ + + ++ + GI++R ++ +A
Sbjct: 151 IGAVTDLDTASERAEAFSTDSISGLLLREAQN-ERLLSAESNDNNGIKERTAFRLERRVA 209
Query: 123 RELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLIS 181
++ + FL ++ + VG+ G V G+M F IA + N+ V PGI E+L++
Sbjct: 210 AISRQMGKGNGFLATIGAISPFVGLFGTVWGIMNSFIGIAHSQTTNLAVVAPGIAEALLA 269
Query: 182 ILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEF 217
LGL +IP+ + YN F + Q+ A +
Sbjct: 270 TALGLVAAIPAVVIYNIFARLIGSYRAQVGDVAAQV 305
>gi|126668396|ref|ZP_01739353.1| Biopolymer transport protein [Marinobacter sp. ELB17]
gi|126627105|gb|EAZ97745.1| Biopolymer transport protein [Marinobacter sp. ELB17]
Length = 229
Score = 201 bits (511), Expect = 8e-50, Method: Composition-based stats.
Identities = 68/220 (30%), Positives = 115/220 (52%), Gaps = 4/220 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
+IS++ L G+ V+ ++ LL + S+ SW++I+Q+ F ++ FE+ FWSG L
Sbjct: 4 EISVWYLISNAGVLVQLVMLLLLLASVASWALILQRVQVFRKAQQSRLAFEERFWSGMDL 63
Query: 70 ETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + + G+ +IF + E+ + + + + + R M VA +RE E
Sbjct: 64 GQLYREVAAEPTPFSGMESIFRAGFREFSRLRQQ-SHDADAVMNGAQRAMRVAFSREQER 122
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
+ L FL ++ S VG+ G V G+M F+ +A + ++ PGI E+LI+ +GL
Sbjct: 123 LEISLPFLATVGSTSPYVGLFGTVWGIMNSFRGLAQVQQATLATVAPGISEALIATAMGL 182
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ IAYN+F S E FA EFS+IL R+
Sbjct: 183 FAAIPAVIAYNRFAARSDALLKNYETFAEEFSSILHRRVH 222
>gi|261346411|ref|ZP_05974055.1| TonB system transport protein ExbB [Providencia rustigianii DSM
4541]
gi|282565393|gb|EFB70928.1| TonB system transport protein ExbB [Providencia rustigianii DSM
4541]
Length = 314
Score = 201 bits (511), Expect = 8e-50, Method: Composition-based stats.
Identities = 47/219 (21%), Positives = 103/219 (47%), Gaps = 2/219 (0%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
D+S++ ++ + VK ++ L + S+++W++ + K + RR+ + + +S
Sbjct: 90 QDLSVWGMYQNADVVVKTVMIGLLLASVITWALFLSKGTEILIARRRLKYEAKAIAEAKS 149
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
L+ + + + + ++ + +K + GI+DR ++ A+A +
Sbjct: 150 LDEAVSIAEGFKSGSITRMLLAEAT-TEKVLSANSNDLSGIKDRTGFRLERAVAAISRYM 208
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
+L ++ + VG+ G V G+M F IA + N+ V PGI E+L++ +GL
Sbjct: 209 GRGNGYLATIGAISPFVGLFGTVWGIMNSFIGIAHSQTTNLAVVAPGIAEALLATAIGLI 268
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ + YN F + Q+ A + + +L R +
Sbjct: 269 AAIPAVVIYNIFARMINNYRGQVGDVAAQAALLLGRDLD 307
>gi|306841382|ref|ZP_07474085.1| tonB-system energizer ExbB [Brucella sp. BO2]
gi|306288567|gb|EFM59916.1| tonB-system energizer ExbB [Brucella sp. BO2]
Length = 329
Score = 201 bits (511), Expect = 8e-50, Method: Composition-based stats.
Identities = 54/225 (24%), Positives = 103/225 (45%), Gaps = 3/225 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
D+S + +FM VK ++ L I S+ +W+V + KS+ RR+ + ++
Sbjct: 95 PHDLSPWGMFMAADWVVKAVMIGLAIASLATWTVWVAKSLELAGARRRANKALKVIGHSA 154
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARS-PIGIQDRIDRMMDVAIARELE 126
+L +L G AA +A E + S AR+ G+++R+ + A+
Sbjct: 155 TLNDAVHALDGMKGPG-AAFVRAAEDEVRLSGPALARAGGEGLKERVASRLSRIEAKAGR 213
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLG 185
+ + L ++ S VG+ G V G+M F +I+ + N+ V PGI E+L++ +G
Sbjct: 214 RLAKGTGILATIGSVAPFVGLFGTVWGIMNSFINISEAQTTNLAVVAPGIAEALLATAIG 273
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
L +IP+ + YN F + + + ++SR + +
Sbjct: 274 LVAAIPAVVIYNVFARSITGYRALLADASAGVERLVSRDLDFRTA 318
>gi|119383479|ref|YP_914535.1| MotA/TolQ/ExbB proton channel [Paracoccus denitrificans PD1222]
gi|119373246|gb|ABL68839.1| outer membrane transport energization protein ExbB [Paracoccus
denitrificans PD1222]
Length = 431
Score = 201 bits (511), Expect = 8e-50, Method: Composition-based stats.
Identities = 49/221 (22%), Positives = 104/221 (47%), Gaps = 3/221 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
D+S + +F+ VK ++ L S+++W+V++ K + + + + +
Sbjct: 202 PHDLSPWGMFLAADWVVKAVMIGLAFASVVTWTVLVAKVLELLGATNRAQSGIRRIEHAA 261
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARS-PIGIQDRIDRMMDVAIARELE 126
SL S + + ++ + +A +E+ +S ++ GI++R+D +D A
Sbjct: 262 SLPAALASAGSRRD-PVSRMIRAAAAEYDRSAPALDQAGDSGIKERVDSHLDRIEAIAGR 320
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLG 185
++ L ++ S VG+ G V G+M F I+ + N+ V PGI E+L++ +G
Sbjct: 321 RMSRGTGVLATIGSTAPFVGLFGTVWGIMNSFIGISQAQTTNLAVVAPGIAEALLATAIG 380
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
L +IP+ + YN F + +++ A ++SR +
Sbjct: 381 LVAAIPAVVIYNVFARAITGYRLRLANAAAGVKRLVSRDLD 421
>gi|104784347|ref|YP_610845.1| solvent/drug/ferric siderophore transport protein ExbB [Pseudomonas
entomophila L48]
gi|95113334|emb|CAK18062.1| solvent/drug/ferric siderophore transport protein ExbB [Pseudomonas
entomophila L48]
Length = 320
Score = 201 bits (511), Expect = 8e-50, Method: Composition-based stats.
Identities = 54/224 (24%), Positives = 101/224 (45%), Gaps = 4/224 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
D+S + ++ + VK ++ L + SI++W++ I K + +R+ R
Sbjct: 89 AHDLSPWGMYKNADVVVKAVMIGLALASIITWTIWIAKGFELMGAKRRLRGEIAALKRSV 148
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
SL+ + N + A+ E + S AR GI++R+ ++ +A
Sbjct: 149 SLKEASD-VSNKEGTLAHTLVHDALEEMRLSA--NAREKEGIKERVSFRLERLVAASGRN 205
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
++ L ++ S VG+ G V G+M F IA + N+ V PGI E+L++ LGL
Sbjct: 206 MSSGTGVLATIGSTAPFVGLFGTVWGIMNSFIGIAKTQTTNLAVVAPGIAEALLATALGL 265
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
+IP+ + YN F + Q+ + + ++SR + S
Sbjct: 266 VAAIPAVVIYNVFARSIAGYKAQVSDASAQVLLLVSRDLDHQGS 309
>gi|152971943|ref|YP_001337052.1| biopolymer transport protein ExbB [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|262042318|ref|ZP_06015483.1| TonB system transporter ExbB [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|290511390|ref|ZP_06550759.1| tonB-system energizer ExbB [Klebsiella sp. 1_1_55]
gi|330008854|ref|ZP_08306316.1| tonB-system energizer ExbB [Klebsiella sp. MS 92-3]
gi|150956792|gb|ABR78822.1| hypothetical protein KPN_03426 [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|259040382|gb|EEW41488.1| TonB system transporter ExbB [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|289776383|gb|EFD84382.1| tonB-system energizer ExbB [Klebsiella sp. 1_1_55]
gi|328535054|gb|EGF61576.1| tonB-system energizer ExbB [Klebsiella sp. MS 92-3]
Length = 238
Score = 201 bits (511), Expect = 8e-50, Method: Composition-based stats.
Identities = 50/223 (22%), Positives = 101/223 (45%), Gaps = 4/223 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S++ ++ + VK ++ L + S+++W++ K + +R+ + +Q +SL
Sbjct: 4 DLSVWGMYHHADIVVKVVMIGLILASVVTWAIFFGKGAEILASKRRLKREQQQLAEARSL 63
Query: 70 ETVCKSLKNHHNIGL-AAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ L + A +E + S GA GI++R ++ +A +
Sbjct: 64 DQASDIASAFEAKSLTTQLINEAQNELELSA--GAEDNEGIKERTGFRLERRVAAVGRHM 121
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
+L ++ + VG+ G V G+M F IA + N+ V PGI E+L++ +GL
Sbjct: 122 GRGNGYLATIGAISPFVGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGIAEALLATAIGLF 181
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
+IP+ + YN F + + A + + SR + + S
Sbjct: 182 AAIPAVVIYNIFARMIGSYKASLGDVAAQVLLLQSRDLDLSAS 224
>gi|262277493|ref|ZP_06055286.1| protein TolQ [alpha proteobacterium HIMB114]
gi|262224596|gb|EEY75055.1| protein TolQ [alpha proteobacterium HIMB114]
Length = 225
Score = 201 bits (511), Expect = 9e-50, Method: Composition-based stats.
Identities = 69/213 (32%), Positives = 120/213 (56%), Gaps = 4/213 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D S + LF + VK +I +L SI SW++I +K F + + EFE+ F + +S+
Sbjct: 16 DFSFWTLFTRADFIVKSVIIMLIAASIYSWALIFEKYKIFKKIFKSSDEFEEEFLNSKSV 75
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+T+ + + + + +F S + ++S + +++ R+MDVAI +E+E+
Sbjct: 76 KTLFEKTSSDTDDPMTVVFRSGAN---YLMQNKSQSQTVLTEKVKRVMDVAIDKEVEKYE 132
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCV 188
KL+FL ++ S +G+ G V G+M FQSIA + ++ + PGI E+L + LGL
Sbjct: 133 NKLTFLATVGSVAPFIGLFGTVWGIMNSFQSIAISRNTSLAIVAPGIAEALFATALGLLA 192
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+IP+ +AYNKF S+KF ++E F F +I+
Sbjct: 193 AIPAVVAYNKFTSSSRKFTQKLENFTQTFLSII 225
>gi|238793632|ref|ZP_04637255.1| TonB complex protein [Yersinia intermedia ATCC 29909]
gi|238727047|gb|EEQ18578.1| TonB complex protein [Yersinia intermedia ATCC 29909]
Length = 336
Score = 201 bits (511), Expect = 9e-50, Method: Composition-based stats.
Identities = 50/216 (23%), Positives = 104/216 (48%), Gaps = 3/216 (1%)
Query: 3 NYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQL 62
GLA MD+S++ ++ + VK ++ L + SI++W+++ K RR+ ++ ++
Sbjct: 95 PQGLA-MDLSVWGMYQHADVVVKGVMIGLVLASIVTWTILFSKGTELFRARRRLQQEYEV 153
Query: 63 FWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIA 122
+ L+T + + ++A+ + ++ + GI++R ++ +A
Sbjct: 154 IGAVTELDTASERAEAFSTDSISALLLREAQN-ERLLSTESNDNNGIKERAAFRLERRVA 212
Query: 123 RELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLIS 181
++ + FL ++ + VG+ G V G+M F IA + N+ V PGI E+L++
Sbjct: 213 AIGRQMGKGNGFLATIGAISPFVGLFGTVWGIMNSFIGIAHSQTTNLAVVAPGIAEALLA 272
Query: 182 ILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEF 217
LGL +IP+ + YN F + Q+ A +
Sbjct: 273 TALGLVAAIPAVVIYNIFARLIGSYRAQVGDVAAQV 308
>gi|317049560|ref|YP_004117208.1| tonB-system energizer ExbB [Pantoea sp. At-9b]
gi|316951177|gb|ADU70652.1| tonB-system energizer ExbB [Pantoea sp. At-9b]
Length = 247
Score = 200 bits (510), Expect = 9e-50, Method: Composition-based stats.
Identities = 51/228 (22%), Positives = 104/228 (45%), Gaps = 5/228 (2%)
Query: 6 LAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS 65
L D+S++ ++ + VK ++ L + S+++W++ K + +R+ +
Sbjct: 6 LMQTDLSVWGMYHHADIVVKVVMIGLLLASVVTWAIFFGKFAELSSAKRRLKREHLALSD 65
Query: 66 GQSLETVCKSLKNHHNIGLAAIFM-SAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARE 124
+SL+ + + +A+ + A +E + S G GI++R ++ +A
Sbjct: 66 ARSLDDAASTAASFKGNSHSAVLLNDAQNELELSA--GVEDTDGIKERTSFRLERRVAAF 123
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISIL 183
FL ++ S +G+ G V G+M F IA + N+ V PGI E+L++
Sbjct: 124 SRHAGRGNGFLATIGSVAPFIGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGIAEALLATA 183
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE-GNIS 230
+GL +IP+ + YN F + + A + + SR + GN++
Sbjct: 184 IGLVAAIPAVVIYNVFARMIAGYKASLGDVAAQVLLLQSRDLDLGNVT 231
>gi|118581726|ref|YP_902976.1| MotA/TolQ/ExbB proton channel [Pelobacter propionicus DSM 2379]
gi|118504436|gb|ABL00919.1| Cell division and transport-associated protein TolQ [Pelobacter
propionicus DSM 2379]
Length = 223
Score = 200 bits (510), Expect = 1e-49, Method: Composition-based stats.
Identities = 69/223 (30%), Positives = 108/223 (48%), Gaps = 8/223 (3%)
Query: 14 FALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVC 73
AL + G+ VK ++ LL FS++SW++I+ K R+ F LFW +T+
Sbjct: 1 MALLLNAGIVVKLVLILLLFFSVVSWAIILFKLFQVHRANRESERFMDLFWKSSRFDTIA 60
Query: 74 KSLKNHHNIGLAAIFMSAMSEWKKSCDKGARS-------PIGIQDRIDRMMDVAIARELE 126
L + L+ +F A +E K DKGA S +G + + R + A EL
Sbjct: 61 SQLDRFSSSPLSVLFNEAYAELNKLMDKGATSNGGGLSTDLGGIENVSRALRRATNSELT 120
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLG 185
+ L+FL + S +G+ G V G+M F+ I S ++ V PGI E+LI+ +G
Sbjct: 121 RLERYLTFLATTGSTSPFIGLFGTVWGIMTAFEGIGRTGSASLAVVAPGIAEALIATAIG 180
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
L +IP+ +AYN F + M+ F+ EF I+ R G
Sbjct: 181 LVAAIPAVMAYNHFQHKIRVLTNDMDSFSTEFLNIVQRTVAGR 223
>gi|167572230|ref|ZP_02365104.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Burkholderia oklahomensis C6786]
Length = 243
Score = 200 bits (510), Expect = 1e-49, Method: Composition-based stats.
Identities = 58/228 (25%), Positives = 98/228 (42%), Gaps = 14/228 (6%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
M +YG+A ++ Q + I L + SILSW VI+ K N I L+R ++ E
Sbjct: 1 MQSYGIA-------HVWAQGDFVTRAIAIALLVMSILSWMVIVIKGWNVIRLKRLSKDAE 53
Query: 61 QLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRID------ 114
Q FW E K L + + F++ +++ D ++ + DR+D
Sbjct: 54 QSFWHSDDFEEGVKKLGSASSSTQDNPFLALALSGQEAADHHHQTQPHLHDRMDVSDWVT 113
Query: 115 RMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG 174
R + + + + L+ L S+ S VG+ G V G+ I ++ + G
Sbjct: 114 RCLKDTMDEGIARMQGGLAILASIGSTAPFVGLFGTVWGIYHALLVIGATGQTSIDQVAG 173
Query: 175 -IIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+ ESLI GL V+IP+ + YN +K ++ FA+ A
Sbjct: 174 PVGESLIMTAFGLFVAIPAVLGYNALTRANKSIVSRLRRFAHGLHAYF 221
>gi|56697944|ref|YP_168315.1| proton transporter TolQ [Ruegeria pomeroyi DSS-3]
gi|56679681|gb|AAV96347.1| proton transporter TolQ [Ruegeria pomeroyi DSS-3]
Length = 231
Score = 200 bits (510), Expect = 1e-49, Method: Composition-based stats.
Identities = 87/230 (37%), Positives = 127/230 (55%), Gaps = 4/230 (1%)
Query: 1 MNNYGLAI---MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFR 57
M LA+ +D S++ LF + L VK ++ LL + S +W++IIQK + + RR+
Sbjct: 1 METEALALAQEIDFSMWGLFARATLTVKLVMLLLVLASFWAWAIIIQKHILYRATRREAD 60
Query: 58 EFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMM 117
F+Q FWSG+ L+ + + + IF + M EW++S G Q RIDR M
Sbjct: 61 RFDQSFWSGEPLDELFEQIGAQPEGSSEKIFAAGMVEWRRSHRNDGGLIAGAQARIDRSM 120
Query: 118 DVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGII 176
DVAIA+E E + L L ++ S VG+ G V G+M F IA + N+ V PGI
Sbjct: 121 DVAIAKEAEGLQRGLPVLATVGSTAPFVGLFGTVWGIMTAFIEIAEQQNTNLAVVAPGIA 180
Query: 177 ESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
E+L++ LGL +IP+ I YNK DS + E FA+EF+ ILSRQ +
Sbjct: 181 EALLATGLGLLAAIPAVIFYNKLSADSDRIVAGYEAFADEFATILSRQLD 230
>gi|167584779|ref|ZP_02377167.1| MotA/TolQ/ExbB proton channel [Burkholderia ubonensis Bu]
Length = 243
Score = 200 bits (510), Expect = 1e-49, Method: Composition-based stats.
Identities = 58/228 (25%), Positives = 95/228 (41%), Gaps = 14/228 (6%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
M +YG+A ++ Q + I L + SILSW VI+ K N I L R + E
Sbjct: 1 MQSYGIA-------HVWAQGDFVTRFIAIALLVMSILSWMVIVIKGWNVIRLNRLTKNAE 53
Query: 61 QLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRID------ 114
Q FW + K L + F++ K++ D ++ + DR+D
Sbjct: 54 QAFWHSDDFDDGIKKLGQAASTPSDNPFLALALAGKEAADHHHQTQPHLHDRMDVSDWIT 113
Query: 115 RMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG 174
R + + + + L+ L S+ S VG+ G V G+ I ++ + G
Sbjct: 114 RCLKDTMDEGIARMQGGLAILASIGSTAPFVGLFGTVWGIYHALLVIGATGQTSIDQVAG 173
Query: 175 -IIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+ ESLI GL V+IP+ + YN +K ++ FA+ A
Sbjct: 174 PVGESLIMTAFGLFVAIPAVLGYNALTRANKGVVSKLRRFAHGLHAYF 221
>gi|189183647|ref|YP_001937432.1| TolQ protein [Orientia tsutsugamushi str. Ikeda]
gi|189180418|dbj|BAG40198.1| TolQ protein [Orientia tsutsugamushi str. Ikeda]
Length = 229
Score = 200 bits (510), Expect = 1e-49, Method: Composition-based stats.
Identities = 55/219 (25%), Positives = 112/219 (51%), Gaps = 1/219 (0%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
ISI + F+ + K ++ L I SI SW++I K +F ++++ F +L S Q ++
Sbjct: 11 ISIISAFLSADIICKTVMVTLIISSIWSWAIIFYKYYHFNNIKKEINTFNKLLQSNQQVD 70
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
+ + ++ ++++ ++E K + A + ++DR+ +++ + E++
Sbjct: 71 ELYSKINKNNGNSISSMLTIVLNECKNEHNVTAGNNSNLKDRLLYTIELTKNQISEQLET 130
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVS 189
L L ++SS +G+LG V G+M FQ+IA + ++ V PGI E+L++ +GL +
Sbjct: 131 YLIVLATISSTAPFIGLLGTVWGIMHSFQAIAATKNTSIAVVAPGIAEALLATAIGLFAA 190
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
IP+ I YN ++E F +F +L + +
Sbjct: 191 IPAGIFYNILTHKVSLIENKLENFIRKFYTVLCKTIDKR 229
>gi|107028621|ref|YP_625716.1| MotA/TolQ/ExbB proton channel [Burkholderia cenocepacia AU 1054]
gi|116690220|ref|YP_835843.1| MotA/TolQ/ExbB proton channel [Burkholderia cenocepacia HI2424]
gi|170733560|ref|YP_001765507.1| MotA/TolQ/ExbB proton channel [Burkholderia cenocepacia MC0-3]
gi|206560652|ref|YP_002231417.1| putative bipolymer transport protein [Burkholderia cenocepacia
J2315]
gi|105897785|gb|ABF80743.1| outer membrane transport energization protein ExbB [Burkholderia
cenocepacia AU 1054]
gi|116648309|gb|ABK08950.1| outer membrane transport energization protein ExbB [Burkholderia
cenocepacia HI2424]
gi|169816802|gb|ACA91385.1| MotA/TolQ/ExbB proton channel [Burkholderia cenocepacia MC0-3]
gi|198036694|emb|CAR52593.1| putative bipolymer transport protein [Burkholderia cenocepacia
J2315]
Length = 244
Score = 200 bits (510), Expect = 1e-49, Method: Composition-based stats.
Identities = 57/228 (25%), Positives = 97/228 (42%), Gaps = 14/228 (6%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
M +YG+A ++ Q + I L + S+LSW VI+ K N I L R + E
Sbjct: 1 MQSYGIA-------HVWAQGDFVTRAIAITLLVMSVLSWIVIVIKGWNVIRLNRLTKNAE 53
Query: 61 QLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRID------ 114
Q FW + + K L + F++ K++ D ++ + DR+D
Sbjct: 54 QAFWHSDNFDDGIKKLGLAASTPNDNPFLALALSGKEAADHHHQTQPHLHDRMDVSDWVT 113
Query: 115 RMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG 174
R + + + + L+ L S+ S VG+ G V G+ +I ++ + G
Sbjct: 114 RCLKDTMDEGISRMQSGLAILASVGSTAPFVGLFGTVWGIYHALLAIGATGQTSIDQVAG 173
Query: 175 -IIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+ ESLI GL V+IP+ + YN +K ++ FA+ A
Sbjct: 174 PVGESLIMTAFGLFVAIPAVLGYNALTRANKGVVSKLRRFAHGLHAYF 221
>gi|187929196|ref|YP_001899683.1| MotA/TolQ/ExbB proton channel [Ralstonia pickettii 12J]
gi|187726086|gb|ACD27251.1| MotA/TolQ/ExbB proton channel [Ralstonia pickettii 12J]
Length = 242
Score = 200 bits (510), Expect = 1e-49, Method: Composition-based stats.
Identities = 49/217 (22%), Positives = 94/217 (43%), Gaps = 3/217 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
+ ++ + L+ Q + + LL I S+ SW VI K+ + + L+ + E+ FW
Sbjct: 1 MQELGLSHLWTQGDIVTRATAILLLIMSLASWIVIFTKAWDIVRLKSMAQGAEKRFWHSD 60
Query: 68 SLETVCKSLKNHHNIGLAAIFMSA--MSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
+ ++L + + A+ + ++ ++ + I D I R + AI +
Sbjct: 61 DFDHAIQTLGSPKDNPFHALAQTGREAAQHHRASQPQLHDVMDISDWITRSLKSAIDEAV 120
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILL 184
++ L+ L S+ S VG+ G V G+ I + + G + ESLI
Sbjct: 121 GQMQSGLAVLASVGSTAPFVGLFGTVWGIYHALLGIGAVGVPTIDKVAGPVGESLIMTAF 180
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
GL V+IP+ + YN +K ++ FA++ A
Sbjct: 181 GLAVAIPAVLGYNALTRGNKAIIAKLNRFAHDLHAYF 217
>gi|77920568|ref|YP_358383.1| TolQ protein [Pelobacter carbinolicus DSM 2380]
gi|77546651|gb|ABA90213.1| Cell division and transport-associated protein TolQ [Pelobacter
carbinolicus DSM 2380]
Length = 223
Score = 200 bits (510), Expect = 1e-49, Method: Composition-based stats.
Identities = 53/202 (26%), Positives = 94/202 (46%), Gaps = 8/202 (3%)
Query: 33 IFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAM 92
FS+LSW++I K + F+Q FW+ + ++ + + L++ + A++F
Sbjct: 20 GFSLLSWAIIFLKFRVIYRAISDSQRFQQFFWNKRHIDAIAQKLRDFPHAPTASLFRDGY 79
Query: 93 SEWKKSCDKGARS-------PIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLV 145
E K++ +G D + R + A +E + + L FL + S +
Sbjct: 80 QEMKRNQRDNGTDEPTLFSADMGQADNVARALRRATNQETQRLERYLPFLATTGSTAPFI 139
Query: 146 GILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSK 204
G+ G V G+M F I S ++ V PGI E+L++ +GL +IP+ +AYN F+
Sbjct: 140 GLFGTVWGIMDSFHGIGKTGSASLAVVAPGISEALVATAIGLVAAIPAVVAYNHFVSKVN 199
Query: 205 KFAMQMEGFANEFSAILSRQTE 226
M+ F+ EF I+ R
Sbjct: 200 VLTGDMDSFSQEFLNIVDRMLR 221
>gi|123443831|ref|YP_001007802.1| MotA/TolQ/ExbB proton channel family protein [Yersinia
enterocolitica subsp. enterocolitica 8081]
gi|122090792|emb|CAL13674.1| MotA/TolQ/ExbB proton channel family protein [Yersinia
enterocolitica subsp. enterocolitica 8081]
Length = 237
Score = 200 bits (509), Expect = 1e-49, Method: Composition-based stats.
Identities = 46/210 (21%), Positives = 99/210 (47%), Gaps = 2/210 (0%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
MD+S++ ++ + VK ++ L + SI++W+++ K RR+ ++ ++ +
Sbjct: 1 MDLSVWGMYQHADVVVKGVMIGLVLASIVTWTILFSKGTELFRARRRLQQEHEVIGAVTD 60
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
L+T + ++ + + ++ + GI++R ++ +A ++
Sbjct: 61 LDTASERAAAFSPESISGLLLREAQN-ERLLSAESNDNNGIKERTAFRLERRVAAISRQM 119
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
+ FL ++ + VG+ G V G+M F IA + N+ V PGI E+L++ LGL
Sbjct: 120 GKGNGFLATIGAISPFVGLFGTVWGIMNSFIGIAHSQTTNLAVVAPGIAEALLATALGLV 179
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEF 217
+IP+ + YN F + Q+ A +
Sbjct: 180 AAIPAVVIYNIFARLIGSYRAQVGDVAAQV 209
>gi|113868499|ref|YP_726988.1| biopolymer transport protein [Ralstonia eutropha H16]
gi|113527275|emb|CAJ93620.1| biopolymer transport protein [Ralstonia eutropha H16]
Length = 242
Score = 200 bits (509), Expect = 1e-49, Method: Composition-based stats.
Identities = 45/217 (20%), Positives = 93/217 (42%), Gaps = 3/217 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
+ D+ + L+ Q ++ +L I S+ SW VI+ K+ + + L++ E+ FW
Sbjct: 1 MQDLGLSHLWTQGDFVMRATAIILLIMSLASWIVILTKAWDLVRLKKMAHGAEKRFWHSD 60
Query: 68 SLETVCKSLKNHHNIGLAAIFMSA--MSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
+ ++L + + ++ ++ ++ + I D + R + +I +
Sbjct: 61 DFDHALETLGAGDSNPFRTLAIAGKEAAQHHRASQPQLHDVMDISDWLTRSLKSSIDDSV 120
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILL 184
+ L+ L S+ S VG+ G V G+ I + + G + E+LI
Sbjct: 121 AHMQSGLAVLASVGSTAPFVGLFGTVWGIYHALIGIGASGVPTIDKVAGPVGEALIMTAF 180
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
GL V+IP+ + YN +K ++ FA++ A
Sbjct: 181 GLAVAIPAVLGYNALTRGNKSVISKLNRFAHDLHAYF 217
>gi|167578827|ref|ZP_02371701.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Burkholderia thailandensis TXDOH]
Length = 242
Score = 200 bits (509), Expect = 1e-49, Method: Composition-based stats.
Identities = 58/228 (25%), Positives = 97/228 (42%), Gaps = 14/228 (6%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
M +YG+A ++ Q + I L + SILSW VI+ K N I L+R ++ E
Sbjct: 1 MQSYGIA-------HVWAQGDFVTRSIAIALLVMSILSWMVIVIKGWNVIRLKRLSKDAE 53
Query: 61 QLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRID------ 114
Q FW + K L + F++ K++ D ++ + DR+D
Sbjct: 54 QSFWHSDDFDEGVKKLGLASSSSQDNPFLALALSGKEAADHHHQTQPHLHDRMDVSDWVT 113
Query: 115 RMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG 174
R + + + + L+ L S+ S VG+ G V G+ I ++ + G
Sbjct: 114 RCLKDTMDEGIARMQGGLAILASIGSTAPFVGLFGTVWGIYHALLVIGATGQTSIDQVAG 173
Query: 175 -IIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+ ESLI GL V+IP+ + YN +K ++ FA+ A
Sbjct: 174 PVGESLIMTAFGLFVAIPAVLGYNALTRANKSVVSRLRRFAHGLHAYF 221
>gi|302343859|ref|YP_003808388.1| protein TolQ [Desulfarculus baarsii DSM 2075]
gi|301640472|gb|ADK85794.1| protein TolQ [Desulfarculus baarsii DSM 2075]
Length = 277
Score = 200 bits (509), Expect = 1e-49, Method: Composition-based stats.
Identities = 59/225 (26%), Positives = 108/225 (48%), Gaps = 5/225 (2%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+ I L Q G VK ++ LL +FS++SW+VI K + +Q +F+ +FW +SL
Sbjct: 43 MDIMHLIFQAGWVVKFVLFLLVLFSVISWAVIFSKLMVLRRSIKQNEQFQAMFWHAKSLG 102
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKK----SCDKGARSPIGIQDRIDRMMDVAIARELE 126
LA +F A +E +K +G P G+ I R + A E
Sbjct: 103 AANAQAMQLAGSPLATVFRLAYAELQKVMGLRKGRGDGLPEGLMANIKRALSRGTAAEAT 162
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLG 185
++ ++FL + ++ +G+ G V G+M F +I + N+ ++ PGI E+L++ G
Sbjct: 163 KLARSVTFLATCANTSPFIGLFGTVWGIMDAFSNIGALKTANLATVAPGIAEALVATATG 222
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
L +IP+ + +N F + +M+ F+ +F ++ + S
Sbjct: 223 LFAAIPAVVFFNHFNRRIQVLEAEMDTFSQDFLNLVELEVMSRQS 267
>gi|118579668|ref|YP_900918.1| MotA/TolQ/ExbB proton channel [Pelobacter propionicus DSM 2379]
gi|118502378|gb|ABK98860.1| Cell division and transport-associated protein TolQ [Pelobacter
propionicus DSM 2379]
Length = 223
Score = 200 bits (509), Expect = 1e-49, Method: Composition-based stats.
Identities = 69/223 (30%), Positives = 108/223 (48%), Gaps = 8/223 (3%)
Query: 14 FALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVC 73
AL + G+ VK ++ LL FS++SW++I+ K R+ F LFW +T+
Sbjct: 1 MALLLNAGVVVKLVLILLLFFSVVSWAIILFKLFQVHRANRESERFMDLFWKSSRFDTIA 60
Query: 74 KSLKNHHNIGLAAIFMSAMSEWKKSCDKGARS-------PIGIQDRIDRMMDVAIARELE 126
L + L+ +F A +E K DKGA S +G + + R + A EL
Sbjct: 61 SQLDRFSSSPLSVLFNEAYAELNKLMDKGATSSGTGLSTDLGGIENVSRALRRATNSELT 120
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLG 185
+ L+FL + S +G+ G V G+M F+ I S ++ V PGI E+LI+ +G
Sbjct: 121 RLERYLTFLATTGSTSPFIGLFGTVWGIMTAFEGIGRTGSASLAVVAPGIAEALIATAIG 180
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
L +IP+ +AYN F + M+ F+ EF I+ R G
Sbjct: 181 LVAAIPAVMAYNHFQHKIRVLTNDMDSFSTEFLNIVQRTVAGR 223
>gi|145588466|ref|YP_001155063.1| MotA/TolQ/ExbB proton channel [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
gi|145046872|gb|ABP33499.1| Cell division and transport-associated protein TolQ
[Polynucleobacter necessarius subsp. asymbioticus
QLW-P1DMWA-1]
Length = 218
Score = 200 bits (509), Expect = 1e-49, Method: Composition-based stats.
Identities = 67/225 (29%), Positives = 113/225 (50%), Gaps = 12/225 (5%)
Query: 7 AIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG 66
+ D+S +L + L V+ ++ LL S+ SW++I +K+ +R+ FE+ FWSG
Sbjct: 3 STQDLSFLSLVLNASLLVQLVMLLLLGMSVASWTIIFKKTAVLRGVRQDTERFERDFWSG 62
Query: 67 QSLETVCKSLKN--HHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARE 124
L T+ ++ + + L IF + M E+ K + D R M RE
Sbjct: 63 GDLNTLLEAAQRNTRSDAVLEHIFEAGMQEFMKVHE---------IDAARRAMKATYQRE 113
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISIL 183
++ + L FL S+ S +G+ G V G+M F+ +A + + PGI E+LI+
Sbjct: 114 MDTLEANLPFLASVGSVSPYIGLFGTVWGIMHSFRGLANVQNATLSAVAPGIAEALIATA 173
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
+GL +IP+ +AYN+ D + +++ E F EF+ IL RQ G
Sbjct: 174 IGLFAAIPAVVAYNRAATDVDRLSIRFETFIEEFTNILQRQNSGR 218
>gi|325498559|gb|EGC96418.1| biopolymer transport protein ExbB [Escherichia fergusonii ECD227]
Length = 230
Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats.
Identities = 54/217 (24%), Positives = 103/217 (47%), Gaps = 4/217 (1%)
Query: 16 LFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKS 75
++ + VKC++ L + S+++W++ KSV F +R+ + +QL +SL+ +
Sbjct: 1 MYQHADIVVKCVMIGLILASVVTWAIFFTKSVEFFKQKRRLKREQQLLADARSLDQASEI 60
Query: 76 LKNHHNIGLA-AIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSF 134
+ L+ + A +E + S G+ GI++R ++ ++A + F
Sbjct: 61 AGDFGKYSLSLQLLNEAQNELELSA--GSDDNDGIKERTSFRLERSVAAVGRYMGRGNGF 118
Query: 135 LGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSS 193
L ++ + VG+ G V G+M F IA + N+ V PGI E+L++ +GL +IP+
Sbjct: 119 LATIGAISPFVGLFGTVWGIMNSFIGIAQSQTTNLAVVAPGIAEALLATAIGLVAAIPAV 178
Query: 194 IAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
+ YN F F + A + + SR + S
Sbjct: 179 VIYNIFARQIAGFKAMLGDVAAQVLLLQSRDLDLEAS 215
>gi|167838895|ref|ZP_02465672.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Burkholderia thailandensis MSMB43]
Length = 243
Score = 200 bits (508), Expect = 2e-49, Method: Composition-based stats.
Identities = 57/228 (25%), Positives = 97/228 (42%), Gaps = 14/228 (6%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
M +YG+A ++ Q + I L + S+LSW VI+ K N I L+R ++ E
Sbjct: 1 MQSYGIA-------HVWAQGDFVTRSIAVALLVMSVLSWMVIVIKGWNVIRLKRLSKDAE 53
Query: 61 QLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRID------ 114
Q FW + K L + F++ K++ D ++ + DR+D
Sbjct: 54 QSFWHSDDFDEGVKKLGRASSSAQDNPFLALALSGKEASDHHHQTQPHLHDRMDVSDWVT 113
Query: 115 RMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG 174
R + + + + L+ L S+ S VG+ G V G+ I ++ + G
Sbjct: 114 RCLKDTMDEGIARMQGGLAILASIGSTAPFVGLFGTVWGIYHALLVIGATGQTSIDQVAG 173
Query: 175 -IIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+ ESLI GL V+IP+ + YN +K ++ FA+ A
Sbjct: 174 PVGESLIMTAFGLFVAIPAVLGYNALTRANKSIVSRLRRFAHGLHAYF 221
>gi|268592103|ref|ZP_06126324.1| ferric siderophore transport system protein ExbB [Providencia
rettgeri DSM 1131]
gi|291312499|gb|EFE52952.1| ferric siderophore transport system protein ExbB [Providencia
rettgeri DSM 1131]
Length = 314
Score = 200 bits (508), Expect = 2e-49, Method: Composition-based stats.
Identities = 48/226 (21%), Positives = 103/226 (45%), Gaps = 4/226 (1%)
Query: 3 NYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQL 62
G D+S++ ++ VK ++ L I S+++W++ K + + RR+ + +
Sbjct: 84 PTGGFDQDLSVWGMYQNADNVVKTVMIGLVIASVITWALFFSKGLEILVARRRLKAEAKA 143
Query: 63 FWSGQSLETVCKSLKNHHNIGLAAIFM-SAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
+SL+ + + + + A++E ++ + G ++R ++ A+
Sbjct: 144 IAEVKSLDEAVSIAEGFKANSITRMLLNEAVTE--RALSANSSDLSGTKERTSFRLERAV 201
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLI 180
A + +L ++ + VG+ G V G+M F IA + N+ V PGI E+L+
Sbjct: 202 AAISRYMGRGNGYLATIGAISPFVGLFGTVWGIMNSFIGIAHSQTTNLAVVAPGIAEALL 261
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+ +GL +IP+ + YN F + Q+ A + + +L R +
Sbjct: 262 ATAIGLIAAIPAVVIYNIFARMINNYRGQVGDVAAQSALLLGRDLD 307
>gi|304396830|ref|ZP_07378710.1| tonB-system energizer ExbB [Pantoea sp. aB]
gi|304355626|gb|EFM19993.1| tonB-system energizer ExbB [Pantoea sp. aB]
Length = 246
Score = 200 bits (508), Expect = 2e-49, Method: Composition-based stats.
Identities = 49/223 (21%), Positives = 99/223 (44%), Gaps = 4/223 (1%)
Query: 6 LAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS 65
L D+S++ ++ + VK ++ L + S+++W++ K +R+ + +
Sbjct: 6 LMQTDLSVWGMYQHADIVVKVVMIGLLLASVVTWAIFFGKYAELSAAKRRLKREQLALGE 65
Query: 66 GQSLETVCKSLKNHHNIGLAAIFM-SAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARE 124
+SL + ++ + + + A +E + S G GI+DR ++ +A
Sbjct: 66 ARSLNDAARIAQSFTGHSHSVVLLNDAQNELELSA--GVEDTNGIKDRTSFRLERRVAAF 123
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISIL 183
FL ++ S +G+ G V G+M F IA + N+ V PGI E+L++
Sbjct: 124 SRHAGRGNGFLATIGSVAPFIGLFGTVWGIMNSFIGIAKTQTTNLAVVAPGIAEALLATA 183
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+GL +IP+ + YN F + + A + + SR +
Sbjct: 184 VGLVAAIPAVVIYNVFARMIANYKASLGDVAAQVMLLQSRDID 226
>gi|75676230|ref|YP_318651.1| MotA/TolQ/ExbB proton channel [Nitrobacter winogradskyi Nb-255]
gi|74421100|gb|ABA05299.1| outer membrane transport energization protein ExbB [Nitrobacter
winogradskyi Nb-255]
Length = 421
Score = 200 bits (508), Expect = 2e-49, Method: Composition-based stats.
Identities = 56/222 (25%), Positives = 101/222 (45%), Gaps = 6/222 (2%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
D+S + +FMQ + VK ++ L S+++W+V + K + RR+ + +
Sbjct: 182 PQDLSPWGMFMQADIVVKAVMIGLAFASLVTWTVWLAKGIELAASRRRAQSCVRKLERAD 241
Query: 68 SLETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
SL+ + +A + +A E ++S G S GI++R+ + A+
Sbjct: 242 SLDAARSEIAEGWTCEGTVADLMGAAERELQRS---GDLSSEGIKERLAIALSRIEAKAG 298
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILL 184
+I L ++ + VG+ G V G+M F I+ + N+ V PGI E+L++ L
Sbjct: 299 RDIARGTGLLATIGATAPFVGLFGTVWGIMNAFIGISQTKTTNLAVVAPGIAEALLATAL 358
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
GL +IP+ I YN F + + + E +SR E
Sbjct: 359 GLVAAIPAVIIYNVFARALSSYRALLSDASGEIIQHISRDLE 400
>gi|78224720|ref|YP_386467.1| MotA/TolQ/ExbB proton channel [Geobacter metallireducens GS-15]
gi|78195975|gb|ABB33742.1| Cell division and transport-associated protein TolQ [Geobacter
metallireducens GS-15]
Length = 224
Score = 200 bits (508), Expect = 2e-49, Method: Composition-based stats.
Identities = 57/200 (28%), Positives = 94/200 (47%), Gaps = 9/200 (4%)
Query: 33 IFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAM 92
FS++SW++I K + + F FW + + V L N L +F
Sbjct: 20 FFSVVSWAIIFFKLLQVYRANSESERFLDFFWKTKRFDAVNSQLDRFTNSPLTVLFSEGY 79
Query: 93 SEWKKSCDKGAR--------SPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLL 144
SE K+ +KG + + +G + I R + A E+ + + ++FL + S
Sbjct: 80 SELKRLVEKGDQKEELDVMSTELGGIENIARALRRATTSEITRLEKYVTFLATTGSTTPF 139
Query: 145 VGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDS 203
+G+ G V G+M F+ I S ++ V PGI E+LI+ +GL +IP+ +AYN F
Sbjct: 140 IGLFGTVWGIMTAFKGIGETGSASLAVVAPGISEALIATAIGLVAAIPAVMAYNHFQYKI 199
Query: 204 KKFAMQMEGFANEFSAILSR 223
K M+ F+ EF I+ R
Sbjct: 200 KVLIATMDNFSTEFLNIVQR 219
>gi|241663387|ref|YP_002981747.1| MotA/TolQ/ExbB proton channel [Ralstonia pickettii 12D]
gi|240865414|gb|ACS63075.1| MotA/TolQ/ExbB proton channel [Ralstonia pickettii 12D]
Length = 242
Score = 200 bits (508), Expect = 2e-49, Method: Composition-based stats.
Identities = 48/217 (22%), Positives = 93/217 (42%), Gaps = 3/217 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
+ ++ + L+ Q + + LL I S+ SW VI K+ + + L+ + E+ FW
Sbjct: 1 MQELGLSHLWTQGDIVTRATAILLLIMSLASWIVIFTKAWDIVRLKSMAQGAEKRFWHSD 60
Query: 68 SLETVCKSLKNHHNIGLAAIFMSA--MSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
+ ++L + + + + ++ ++ + I D I R + AI +
Sbjct: 61 DFDHAIQTLGSPKDNPFHTLAQTGREAAQHHRASQPQLHDVMDISDWITRSLKSAIDEAV 120
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILL 184
++ L+ L S+ S VG+ G V G+ I + + G + ESLI
Sbjct: 121 GQMQSGLAVLASVGSTAPFVGLFGTVWGIYHALLGIGAVGVPTIDKVAGPVGESLIMTAF 180
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
GL V+IP+ + YN +K ++ FA++ A
Sbjct: 181 GLAVAIPAVLGYNALTRGNKAIIAKLNRFAHDLHAYF 217
>gi|238782872|ref|ZP_04626901.1| TonB complex protein [Yersinia bercovieri ATCC 43970]
gi|238716295|gb|EEQ08278.1| TonB complex protein [Yersinia bercovieri ATCC 43970]
Length = 332
Score = 200 bits (508), Expect = 2e-49, Method: Composition-based stats.
Identities = 49/216 (22%), Positives = 104/216 (48%), Gaps = 3/216 (1%)
Query: 3 NYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQL 62
GLA MD+S++ ++ + VK ++ L + SI++W+++ K RR+ + ++
Sbjct: 91 PQGLA-MDLSVWGMYQHADVVVKGVMIGLVLASIVTWTILFSKGTELFRARRRLLQEHEV 149
Query: 63 FWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIA 122
+ L+T + + + ++++ + ++ + GI++R ++ +A
Sbjct: 150 IGAVTDLDTASERAEVFASDSISSLLLREAQN-ERLLSAESNDNNGIKERAAFRLERRVA 208
Query: 123 RELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLIS 181
++ + FL ++ + VG+ G V G+M F IA + N+ V PGI E+L++
Sbjct: 209 AIGRQMGKGNGFLATIGAISPFVGLFGTVWGIMNSFIGIAHSQTTNLAVVAPGIAEALLA 268
Query: 182 ILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEF 217
LGL +IP+ + YN F + Q+ A +
Sbjct: 269 TALGLVAAIPAVVIYNIFARLIGSYRAQVGDVAAQV 304
>gi|238755462|ref|ZP_04616802.1| TonB complex protein [Yersinia ruckeri ATCC 29473]
gi|238706303|gb|EEP98680.1| TonB complex protein [Yersinia ruckeri ATCC 29473]
Length = 339
Score = 199 bits (507), Expect = 2e-49, Method: Composition-based stats.
Identities = 49/215 (22%), Positives = 101/215 (46%), Gaps = 3/215 (1%)
Query: 3 NYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQL 62
GLA MD+S++ ++ + VK ++ L + S+++WS++ K + RR+ + +
Sbjct: 98 PQGLA-MDLSVWGMYQHADVVVKAVMIGLVLASVVTWSILFSKGMELYRARRRLHQEHMV 156
Query: 63 FWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIA 122
S +L + ++ + + +E ++ G+ G ++R ++ +A
Sbjct: 157 LGSATNLNDALAQADDFAPESISGMLLRE-AENERQLSAGSSDNSGTKERASFRLERRVA 215
Query: 123 RELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLIS 181
++ + FL ++ + VG+ G V G+M F IA + N+ V PGI E+L++
Sbjct: 216 AVSRQMGKGTGFLATIGAISPFVGLFGTVWGIMNSFIGIAHSQTTNLAVVAPGIAEALLA 275
Query: 182 ILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANE 216
LGL +IP+ + YN F + + A +
Sbjct: 276 TALGLVAAIPAVVIYNIFARLIATYRAHVGDVAAQ 310
>gi|167616913|ref|ZP_02385544.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Burkholderia thailandensis Bt4]
gi|257140844|ref|ZP_05589106.1| MotA/TolQ/ExbB proton channel family protein [Burkholderia
thailandensis E264]
Length = 241
Score = 199 bits (507), Expect = 2e-49, Method: Composition-based stats.
Identities = 55/227 (24%), Positives = 94/227 (41%), Gaps = 13/227 (5%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
M +YG+A ++ Q + I L + SILSW VI+ K N I L+R ++ E
Sbjct: 1 MQSYGIA-------HVWAQGDFVTRSIAIALLVMSILSWMVIVIKGWNVIRLKRLSKDAE 53
Query: 61 QLFWSGQSLETVCKSLK---NHHNIGLAAIFMSA--MSEWKKSCDKGARSPIGIQDRIDR 115
Q FW + K L + + A+ +S ++ + + D + R
Sbjct: 54 QSFWHSDDFDEGVKKLGLASSSQDNPFLALALSGKEAADHHHQTQPHLHDRMDVSDWVTR 113
Query: 116 MMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG- 174
+ + + + L+ L S+ S VG+ G V G+ I ++ + G
Sbjct: 114 CLKDTMDEGIARMQGGLAILASIGSTAPFVGLFGTVWGIYHALLVIGATGQTSIDQVAGP 173
Query: 175 IIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+ ESLI GL V+IP+ + YN +K ++ FA+ A
Sbjct: 174 VGESLIMTAFGLFVAIPAVLGYNALTRANKSVVSRLRRFAHGLHAYF 220
>gi|300112855|ref|YP_003759430.1| protein TolQ [Nitrosococcus watsonii C-113]
gi|299538792|gb|ADJ27109.1| protein TolQ [Nitrosococcus watsonii C-113]
Length = 226
Score = 199 bits (507), Expect = 2e-49, Method: Composition-based stats.
Identities = 64/223 (28%), Positives = 114/223 (51%), Gaps = 4/223 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
+D+S+ L V+ +I +L I S+++W++I +K R + EFE FWSG+
Sbjct: 2 TVDLSLLDLITGASFLVQLVILILLIISVIAWTLIFRKRGELKQAREEADEFEDRFWSGK 61
Query: 68 SLETVCKSLKNH---HNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARE 124
L + L G+ IF++ E+ + + + + R M V++ARE
Sbjct: 62 ELNNLYAELAAQQELPPGGMEGIFLAGFGEFARLRKQVGIEHRTVLEGTQRAMRVSLARE 121
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISIL 183
++ + L FL ++ S +G+ G V G+M F+ + + + + PGI E+LI+
Sbjct: 122 IDRLEASLPFLATVGSTSPYIGLFGTVWGIMNSFRGLGNAHQATLAMVAPGIAEALIATA 181
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+GL +IP+ IAYN++ + ++ A + + F EFS IL RQ
Sbjct: 182 MGLFAAIPAVIAYNRYAYEVERLANRYDTFIEEFSTILQRQIH 224
>gi|161524253|ref|YP_001579265.1| MotA/TolQ/ExbB proton channel [Burkholderia multivorans ATCC 17616]
gi|189350990|ref|YP_001946618.1| biopolymer transport protein [Burkholderia multivorans ATCC 17616]
gi|221214855|ref|ZP_03587824.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
multivorans CGD1]
gi|160341682|gb|ABX14768.1| MotA/TolQ/ExbB proton channel [Burkholderia multivorans ATCC 17616]
gi|189335012|dbj|BAG44082.1| biopolymer transport protein [Burkholderia multivorans ATCC 17616]
gi|221165394|gb|EED97871.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
multivorans CGD1]
Length = 243
Score = 199 bits (507), Expect = 2e-49, Method: Composition-based stats.
Identities = 57/228 (25%), Positives = 96/228 (42%), Gaps = 14/228 (6%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
M +YG+A ++ Q + I L + S+LSW VI+ K N + L R + E
Sbjct: 1 MQSYGIA-------HVWAQGDFVTRAIAITLLVMSVLSWIVIVVKGWNVVRLNRLTKNAE 53
Query: 61 QLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRID------ 114
Q FW E K L + F++ K++ D ++ + DR+D
Sbjct: 54 QGFWHSDDFEDGIKKLGLAASTPADNPFLALALSGKEAADHHHQTQPHLHDRMDVSDWVT 113
Query: 115 RMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG 174
R + + + + L+ L S+ S VG+ G V G+ +I ++ + G
Sbjct: 114 RCLKDTMDEGIARMQSGLAILASIGSTAPFVGLFGTVWGIYHALLAIGMTGQTSIDQVAG 173
Query: 175 -IIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+ ESLI GL V+IP+ + YN +K ++ FA+ A
Sbjct: 174 PVGESLIMTAFGLFVAIPAVLGYNALTRANKGIVSKLRRFAHGLHAYF 221
>gi|42521815|ref|NP_967195.1| adventurous gliding motility protein X [Bdellovibrio bacteriovorus
HD100]
gi|39574345|emb|CAE77849.1| Adventurous gliding motility protein X [Bdellovibrio bacteriovorus
HD100]
Length = 245
Score = 199 bits (507), Expect = 2e-49, Method: Composition-based stats.
Identities = 58/221 (26%), Positives = 108/221 (48%), Gaps = 8/221 (3%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLET 71
S Q V+ + +L + S+ W++ K V F +++ F FW SL+T
Sbjct: 20 SSIDAIAQASPIVQLTLLMLIVMSVFCWAIGYSKYVTFKNMKQSDELFLSKFWKVNSLDT 79
Query: 72 VCKSLKNHHNIGLAAIFMSAMSEWKK-------SCDKGARSPIGIQDRIDRMMDVAIARE 124
+ + + + + +A +F + E KK S +G + + D ++R+++ A E
Sbjct: 80 LFEDIDQYKDSSVARVFKAVYLEMKKISESPLLSKTEGDKPILSGIDNLERVLNKATESE 139
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISIL 183
+ ++ +L+ L + S G +G+ G V G+MG F I + ++ V PGI E+LI+
Sbjct: 140 ISKLESRLTVLATTGSTGPFIGLFGTVWGIMGSFHKIGQTGTASLAVVAPGISEALIATA 199
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+GL +IP+ + YN FI +K + + F +F I+ R
Sbjct: 200 IGLATAIPAVVLYNNFISKIRKQEIVLNNFGADFLNIVKRN 240
>gi|237745916|ref|ZP_04576396.1| MotA/TolQ/ExbB proton channel family protein [Oxalobacter
formigenes HOxBLS]
gi|229377267|gb|EEO27358.1| MotA/TolQ/ExbB proton channel family protein [Oxalobacter
formigenes HOxBLS]
Length = 251
Score = 199 bits (507), Expect = 2e-49, Method: Composition-based stats.
Identities = 53/218 (24%), Positives = 96/218 (44%), Gaps = 5/218 (2%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
+I Q K I+ +L S++SW++II K + +R +EF Q FW+ SL
Sbjct: 7 NIGFSHFIAQSDFLGKTILAILIGMSVVSWTLIIVKGIAGWRRKRHSKEFLQFFWNATSL 66
Query: 70 ETVCKSLKNH----HNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
+TV ++ H L A A +Q+ + R M + + +
Sbjct: 67 DTVRHEIQTHGIKCPFSHLTAHAQHAKEHHVHYGAAKLSEAGTMQEFVTRTMRMVMDEDA 126
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILL 184
+ L+ L ++ S +G+ G V G+ +I+ + + + G + E+LI +
Sbjct: 127 ARLENGLTVLATIGSTAPFIGLFGTVWGIYNALINISASGAGTLDMVAGPVGEALIMTGI 186
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
GL V+IP+ I YN + + +++ FANE L+
Sbjct: 187 GLAVAIPAVIGYNWLVRSNNVMMSKLDTFANELLTFLT 224
>gi|146329605|ref|YP_001210059.1| TolQ protein [Dichelobacter nodosus VCS1703A]
gi|146233075|gb|ABQ14053.1| TolQ protein [Dichelobacter nodosus VCS1703A]
Length = 227
Score = 199 bits (507), Expect = 2e-49, Method: Composition-based stats.
Identities = 65/219 (29%), Positives = 115/219 (52%), Gaps = 2/219 (0%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFW-SGQ 67
++S+ L + V+ I+ +LFI ++ + + + V+F + + ++F Q FW
Sbjct: 3 TELSVGHLIFNASVIVQAIMLILFIMLTITIKISVNRWVHFKRIEYKTKQFNQTFWDHAT 62
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
L+ + + KN + G+ IFM E+ S G +P I R ++ I +E
Sbjct: 63 DLQMLYEYYKNRSSEGIERIFMKGFDEFIHSHASGITNPDVIVQNCRRAIEAEIMLIGDE 122
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV-SIPGIIESLISILLGL 186
+ LS L + +S+ +G+LG V G+M F ++ G +++ PGI E+LI+ +GL
Sbjct: 123 HEKNLSVLATFASSAPYIGLLGTVYGIMTSFIALGGVQQSSIASVAPGIAEALIATAIGL 182
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
C +IPS ++YN FI S++ M+ E F +FS +L RQ
Sbjct: 183 CAAIPSVLSYNFFIAKSERLQMEYEAFIEKFSNLLHRQL 221
>gi|309782378|ref|ZP_07677102.1| transporter, MotA/TolQ/ExbB proton channel family [Ralstonia sp.
5_7_47FAA]
gi|308918715|gb|EFP64388.1| transporter, MotA/TolQ/ExbB proton channel family [Ralstonia sp.
5_7_47FAA]
Length = 242
Score = 199 bits (507), Expect = 2e-49, Method: Composition-based stats.
Identities = 48/217 (22%), Positives = 93/217 (42%), Gaps = 3/217 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
+ ++ + L+ Q + + LL I S+ SW VI K+ + + L+ + E+ FW
Sbjct: 1 MQELGLSHLWTQGDVVTRATAILLLIMSLASWIVIFTKAWDIVRLKSMAQGAEKRFWHSD 60
Query: 68 SLETVCKSLKNHHNIGLAAIFMSA--MSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
+ ++L + + + + ++ ++ + I D I R + AI +
Sbjct: 61 DFDHAIQTLGSPKDNPFHTLAQTGREAAQHHRASQPQLHDVMDISDWITRSLKSAIDEAV 120
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILL 184
++ L+ L S+ S VG+ G V G+ I + + G + ESLI
Sbjct: 121 GQMQSGLAVLASVGSTAPFVGLFGTVWGIYHALLGIGAVGVPTIDKVAGPVGESLIMTAF 180
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
GL V+IP+ + YN +K ++ FA++ A
Sbjct: 181 GLAVAIPAVLGYNALTRGNKAIIAKLNRFAHDLHAYF 217
>gi|322418111|ref|YP_004197334.1| protein TolQ [Geobacter sp. M18]
gi|320124498|gb|ADW12058.1| protein TolQ [Geobacter sp. M18]
Length = 224
Score = 199 bits (506), Expect = 3e-49, Method: Composition-based stats.
Identities = 56/204 (27%), Positives = 91/204 (44%), Gaps = 9/204 (4%)
Query: 34 FSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMS 93
FS++SW +I K + F + FW + + + L + L +F
Sbjct: 21 FSVVSWGIIFYKLLQVYRANGASERFLEFFWKAKRFDAINSQLDRFEHSPLTVLFQEGYG 80
Query: 94 EWKKSCDK--------GARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLV 145
E KK +K + +G D I R + A E+ + + L+FL + + V
Sbjct: 81 ELKKLQEKVEEKADPNTVSTDLGGVDNIARALRRATTSEITRLEKYLTFLATTGATAPFV 140
Query: 146 GILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSK 204
G+ G V G+M F+ I S ++ V PGI E+LI+ +GL +IP+ + YN F K
Sbjct: 141 GLFGTVWGIMTAFEKIGQSGSASLAVVAPGIAEALIATAIGLVAAIPAVMGYNHFQHKIK 200
Query: 205 KFAMQMEGFANEFSAILSRQTEGN 228
+M+ F+ EF I+ R G
Sbjct: 201 VLISEMDSFSTEFLNIVQRNFAGR 224
>gi|295701103|ref|YP_003608996.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. CCGE1002]
gi|295440316|gb|ADG19485.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. CCGE1002]
Length = 256
Score = 199 bits (506), Expect = 3e-49, Method: Composition-based stats.
Identities = 55/228 (24%), Positives = 97/228 (42%), Gaps = 14/228 (6%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
M +YGLA ++ + I+ +L I S+LSW+V+I K I LRR + +
Sbjct: 1 MQHYGLA-------NVWDSGDFVTRGILGVLVIMSVLSWTVLIVKLWQVIRLRRVTSQSD 53
Query: 61 QLFWSGQSLETVCKSLK----NHHNIGLAAIFMSAMSE--WKKSCDKGARSPIGIQDRID 114
FWS + +L + H+ L A+ ++ + + I + D I
Sbjct: 54 ARFWSADRFDDGLHALGYPDSSAHDNPLLALALAGHEAATHHRQTQQQLHDRIDVSDWIT 113
Query: 115 RMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG 174
R + + + + L+ L S+ S VG+ G V G+ I ++ + G
Sbjct: 114 RRLQDTMDETIARLQSGLAILASIGSTAPFVGLFGTVWGIYHALIVIGETGQTSIDHVAG 173
Query: 175 -IIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+ ESLI GL V+IP+ + YN ++ +++ FA+ A
Sbjct: 174 PVGESLIMTAFGLFVAIPAVLGYNGLTRANRSIVARLKRFAHGLHAYF 221
>gi|221198506|ref|ZP_03571552.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
multivorans CGD2M]
gi|221208544|ref|ZP_03581545.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
multivorans CGD2]
gi|221171535|gb|EEE03981.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
multivorans CGD2]
gi|221182438|gb|EEE14839.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
multivorans CGD2M]
Length = 243
Score = 199 bits (506), Expect = 3e-49, Method: Composition-based stats.
Identities = 58/228 (25%), Positives = 96/228 (42%), Gaps = 14/228 (6%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
M +YG+A ++ Q + I L + SILSW VI+ K N + L R + E
Sbjct: 1 MQSYGIA-------HVWAQGDFVTRAIAITLLVMSILSWIVIVVKGWNVVRLNRLTKNAE 53
Query: 61 QLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRID------ 114
Q FW E K L + F++ K++ D ++ + DR+D
Sbjct: 54 QGFWHSDDFEDGIKKLGLAASTPADNPFLALALSGKEAADHHHQTQPHLHDRMDVSDWVT 113
Query: 115 RMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG 174
R + + + + L+ L S+ S VG+ G V G+ +I ++ + G
Sbjct: 114 RCLKDTMDEGIARMQSGLAILASIGSTAPFVGLFGTVWGIYHALLAIGMTGQTSIDQVAG 173
Query: 175 -IIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+ ESLI GL V+IP+ + YN +K ++ FA+ A
Sbjct: 174 PVGESLIMTAFGLFVAIPAVLGYNALTRANKGIVSKLRRFAHGLHAYF 221
>gi|320354284|ref|YP_004195623.1| cell division and transport-associated protein TolQ [Desulfobulbus
propionicus DSM 2032]
gi|320122786|gb|ADW18332.1| Cell division and transport-associated protein TolQ [Desulfobulbus
propionicus DSM 2032]
Length = 230
Score = 199 bits (506), Expect = 3e-49, Method: Composition-based stats.
Identities = 65/226 (28%), Positives = 109/226 (48%), Gaps = 9/226 (3%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
M +SIF + G+ K I+ +L IFS+ SWS++I K + F R +F FW ++
Sbjct: 1 MSLSIFEIMKHAGMMGKLIMLILLIFSVASWSIVIMKFLMFRKARNASLDFLDAFWDSKT 60
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGA--------RSPIGIQDRIDRMMDVA 120
L + + + A +F++ +E KK + + + D + R + A
Sbjct: 61 LNEAYDAAREYPLSPEATVFVTGYNELKKISAARSAGQALATLETQLATMDNLKRAVRKA 120
Query: 121 IARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESL 179
E + + +S L + SA +G+ G V G+M FQSI S ++ V PGI E+L
Sbjct: 121 QFLESDRLASYISVLATTGSATPFIGLFGTVWGIMASFQSIGERGSASLAVVAPGISEAL 180
Query: 180 ISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
++ GL V+IP+ I YN F +F +E F+ +F ++ R
Sbjct: 181 VATAAGLAVAIPAVIFYNYFSNKVAEFDSNVESFSTDFINLIERDI 226
>gi|308188108|ref|YP_003932239.1| Biopolymer transport exbB protein [Pantoea vagans C9-1]
gi|308058618|gb|ADO10790.1| Biopolymer transport exbB protein [Pantoea vagans C9-1]
Length = 240
Score = 199 bits (506), Expect = 3e-49, Method: Composition-based stats.
Identities = 48/220 (21%), Positives = 97/220 (44%), Gaps = 4/220 (1%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
D+S++ ++ + VK ++ L + S+++W++ K +R+ + + ++
Sbjct: 3 TDLSVWGMYQHADIVVKVVMIGLLLASVVTWAIFFGKYAELSAAKRRLKREQLALGEARN 62
Query: 69 LETVCKSLKNHHNIGLAAIFM-SAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
L + K + + + A +E + S G GI+DR ++ +A
Sbjct: 63 LNDAARIAKAFTGHSHSVVLLNDAQNELELSA--GVEDTNGIKDRTSFRLERRVAAFSRH 120
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
FL ++ S +G+ G V G+M F IA + N+ V PGI E+L++ +GL
Sbjct: 121 AGRGNGFLATIGSVAPFIGLFGTVWGIMNSFIGIAKTQTTNLAVVAPGIAEALLATAIGL 180
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ + YN F + + A + + SR +
Sbjct: 181 VAAIPAVVIYNVFARMIANYKASLGDVAAQVMLLQSRDID 220
>gi|289809365|ref|ZP_06539994.1| biopolymer transport protein ExbB [Salmonella enterica subsp.
enterica serovar Typhi str. AG3]
Length = 203
Score = 199 bits (506), Expect = 3e-49, Method: Composition-based stats.
Identities = 51/200 (25%), Positives = 97/200 (48%), Gaps = 4/200 (2%)
Query: 6 LAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS 65
L D+S++ ++ + VKC++ L + S+++W++ KSV F T +R+ + +
Sbjct: 5 LMQTDLSVWGMYQHADIVVKCVMIGLILASVVTWAIFFSKSVEFFTQKRRLKREQLQLAD 64
Query: 66 GQSLETVCKSLKNHHNIGL-AAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARE 124
+SL+ L A + A +E + S +G+ GI++R ++ +A
Sbjct: 65 ARSLDQASDIAAGFSAKSLSAQLINEAQNELELS--QGSEDNEGIKERTGFRLERRVAAV 122
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISIL 183
+ +L ++ + VG+ G V G+M F IA + N+ V PGI E+L++
Sbjct: 123 GRYMGRGNGYLATIGAISPFVGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGIAEALLATA 182
Query: 184 LGLCVSIPSSIAYNKFIEDS 203
+GL +IP+ + YN F
Sbjct: 183 IGLVAAIPAVVIYNIFARQI 202
>gi|290474740|ref|YP_003467620.1| TonB complex protein [Xenorhabdus bovienii SS-2004]
gi|289174053|emb|CBJ80840.1| TonB complex protein [Xenorhabdus bovienii SS-2004]
Length = 330
Score = 199 bits (506), Expect = 3e-49, Method: Composition-based stats.
Identities = 49/220 (22%), Positives = 100/220 (45%), Gaps = 2/220 (0%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
D+S++ ++ VK ++ L I S+++W++ K + RR+ R+ +
Sbjct: 100 ATDLSVWGMYQNADAVVKTVMLGLVIASVITWALFFSKGTELLIARRRLRKEQWALADAA 159
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+L+ K + ++ + +S +++ + G ++R M+ A+A
Sbjct: 160 NLDVAAKIASDFGKQSISRLLLSEAQS-ERALSAASTDKAGTKERTSFRMERAVAAISRH 218
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
+ +L ++ + VG+ G V G+M F IA + N+ V PGI E+L++ LGL
Sbjct: 219 MGRGNGYLATIGAISPFVGLFGTVWGIMNSFIGIAHSQTTNLAVVAPGIAEALLATALGL 278
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ + YN F + Q+ A + +L R +
Sbjct: 279 VAAIPAVVIYNIFARVISSYRGQVGDMAAQAILLLGRDLD 318
>gi|253702169|ref|YP_003023358.1| protein TolQ [Geobacter sp. M21]
gi|251777019|gb|ACT19600.1| protein TolQ [Geobacter sp. M21]
Length = 224
Score = 199 bits (506), Expect = 3e-49, Method: Composition-based stats.
Identities = 56/204 (27%), Positives = 90/204 (44%), Gaps = 9/204 (4%)
Query: 34 FSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMS 93
FS++SW +I K + F FW + + + L N L +F
Sbjct: 21 FSVVSWGIIFYKLLQVSRANGASERFLDFFWKAKRFDAINGQLDRFTNSPLTVLFQEGYG 80
Query: 94 EWKKSCDK--------GARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLV 145
E KK +K + +G D I R + A E+ + + L+FL + + +
Sbjct: 81 ELKKLQEKVEEKADPTSISTDLGGIDNIARALRRATTSEITRLEKYLTFLATTGATAPFI 140
Query: 146 GILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSK 204
G+ G V G+M F+ I S ++ V PGI E+LI+ +GL +IP+ + YN F K
Sbjct: 141 GLFGTVWGIMTAFEKIGQTGSASLAVVAPGIAEALIATAIGLVAAIPAVMGYNHFQHKIK 200
Query: 205 KFAMQMEGFANEFSAILSRQTEGN 228
+M+ F+ EF I+ R G
Sbjct: 201 VLISEMDSFSTEFLNIVQRNFAGR 224
>gi|327395240|dbj|BAK12662.1| biopolymer transport ExbB protein [Pantoea ananatis AJ13355]
Length = 241
Score = 199 bits (506), Expect = 3e-49, Method: Composition-based stats.
Identities = 48/219 (21%), Positives = 99/219 (45%), Gaps = 4/219 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S++ ++ + VK ++ L + S+++W++ K +R+ + + ++L
Sbjct: 4 DLSVWGMYQHADIVVKVVMIGLLLASVVTWAIFFGKYAELSAAKRRLKREQLALGEARNL 63
Query: 70 ETVCKSLKNHHNIGLAAIFM-SAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
++ + +A+ + A +E + S G GI++R ++ +A
Sbjct: 64 NDAARAAQQFKTASHSAVLLNDAQNELELSA--GVEDTAGIKERTAFRLERRVAAFCRHA 121
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
FL ++ S VG+ G V G+M F IA + N+ V PGI E+L++ +GL
Sbjct: 122 GRGNGFLATIGSVAPFVGLFGTVWGIMNSFIGIAKTQTTNLAVVAPGIAEALLATAIGLV 181
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ + YN F + + A + + SR +
Sbjct: 182 AAIPAVVIYNVFARMIANYKASLGDVAAQIMLLQSRDID 220
>gi|92119098|ref|YP_578827.1| MotA/TolQ/ExbB proton channel [Nitrobacter hamburgensis X14]
gi|91801992|gb|ABE64367.1| outer membrane transport energization protein ExbB [Nitrobacter
hamburgensis X14]
Length = 366
Score = 198 bits (505), Expect = 3e-49, Method: Composition-based stats.
Identities = 54/219 (24%), Positives = 104/219 (47%), Gaps = 4/219 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
+++ +FM VK ++ L + S+++WSV + K++ ++ R + + +
Sbjct: 138 PHELTPIGMFMAADYIVKSVMIGLALASVMTWSVWLAKTIELLSARSKLLRDLRSVEGVR 197
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
SLE +L+ +A + +A E ++S D A + GI++R+ + A
Sbjct: 198 SLEEANNTLQ-RAGSDIAILTHAARDEIRRSQD--AMNHDGIKERVASLFSRIEAAAARR 254
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
+T S L ++ S VG+ G V G+M F I+ + N+ V PGI E+L++ +GL
Sbjct: 255 MTRGTSILATIGSTAPFVGLFGTVWGIMNAFIGISKSQTTNLAVVAPGIAEALLATAMGL 314
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ + YN F + + + E ++SR
Sbjct: 315 VAAIPAVMIYNMFSRSITGYRGLLGDGSAELMRMVSRDL 353
>gi|262368711|ref|ZP_06062040.1| TolQ protein [Acinetobacter johnsonii SH046]
gi|262316389|gb|EEY97427.1| TolQ protein [Acinetobacter johnsonii SH046]
Length = 236
Score = 198 bits (505), Expect = 4e-49, Method: Composition-based stats.
Identities = 55/220 (25%), Positives = 111/220 (50%), Gaps = 3/220 (1%)
Query: 7 AIMD-ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS 65
A MD +S++ L + VK ++ +L + S++SW +I++ + + + F + F
Sbjct: 7 ATMDQMSVWMLISHASVLVKVVMLILVLSSVVSWYLIVRHGMLLRGQEQLWNRFLKNFRQ 66
Query: 66 GQSLETVCKSLKNHHNI-GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARE 124
+ L + + + G+ +IF + E+ + + + D ++R + +I+ E
Sbjct: 67 QKDLNLLQQDYQQPEQQKGVVSIFQHGIDEYHQLIKDEQLTTSDVIDGVERRLLSSISEE 126
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISIL 183
E++ + L+FL ++ S +G+ G V G+M F ++ + PGI E+LI+
Sbjct: 127 EEKLQQNLTFLATVGSVSPYIGLFGTVWGIMNAFIGLSAVEQATLNTVAPGIAEALIATA 186
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
+GL +IP+ +AYN+F + K + + GFANE + R
Sbjct: 187 IGLFAAIPAVVAYNRFSARADKLSSRYYGFANELQTRIYR 226
>gi|183601006|ref|ZP_02962499.1| hypothetical protein PROSTU_04622 [Providencia stuartii ATCC 25827]
gi|188019339|gb|EDU57379.1| hypothetical protein PROSTU_04622 [Providencia stuartii ATCC 25827]
Length = 310
Score = 198 bits (505), Expect = 4e-49, Method: Composition-based stats.
Identities = 46/218 (21%), Positives = 100/218 (45%), Gaps = 2/218 (0%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S++ ++ VK ++ L + S+++W++ K + + RR+ + +SL
Sbjct: 87 DLSVWGMYQNADNVVKTVMIGLVLASVITWALFFSKGIELLAARRRLKAEVAQLNKVKSL 146
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+ + + + + + +++ + GI+DR ++ +IA +
Sbjct: 147 DEAMSIAEGFKANSVTRLLLK-QAVVERTLSAQSTDLSGIKDRTGFRLERSIAAISRHMG 205
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCV 188
+L ++ + VG+ G V G+M F IA + N+ V PGI E+L++ +GL
Sbjct: 206 RGNGYLATIGAISPFVGLFGTVWGIMNSFIGIAHSQTTNLAVVAPGIAEALLATAIGLIA 265
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ + YN F + Q+ A + + +L R +
Sbjct: 266 AIPAVVIYNIFARMINNYRGQVGDVAAQAALLLGRDLD 303
>gi|91777657|ref|YP_552865.1| bipolymer transport protein MotA/TolQ/ExbB family [Burkholderia
xenovorans LB400]
gi|91690317|gb|ABE33515.1| outer membrane transport energization protein ExbB [Burkholderia
xenovorans LB400]
Length = 262
Score = 198 bits (505), Expect = 4e-49, Method: Composition-based stats.
Identities = 56/229 (24%), Positives = 94/229 (41%), Gaps = 15/229 (6%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
M +YGLA ++ + +CI+ L I S+LSW+VI+ K + +RR R+ E
Sbjct: 1 MQHYGLA-------NVWESGDIVTRCILGTLLIMSVLSWTVILVKLWTIVRIRRVTRQAE 53
Query: 61 QLFWSGQSLETVCKSLKNHHNIGLAA-------IFMSAMSEWKKSCDKGARSPIGIQDRI 113
FW E KSL + + + + + I + D I
Sbjct: 54 AQFWRADRFEDGLKSLGAEASKSVRDNPLLALALAGEEAAAHHRQTQSHLHDRIDVSDWI 113
Query: 114 DRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP 173
R + + + + L+ L S+ S VG+ G V G+ I ++ +
Sbjct: 114 TRRLQDTMDDAIARMQSGLAVLASIGSTAPFVGLFGTVWGIYHALILIGETGQTSIDHVA 173
Query: 174 G-IIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
G + ESLI GL V+IP+ + YN +K +++ FA+ A
Sbjct: 174 GPVGESLIMTAFGLFVAIPAVLGYNGLTRANKSVVTRLKRFAHGLHAYF 222
>gi|300724564|ref|YP_003713889.1| ExbB [Xenorhabdus nematophila ATCC 19061]
gi|297631106|emb|CBJ91794.1| ExbB [Xenorhabdus nematophila ATCC 19061]
Length = 333
Score = 198 bits (505), Expect = 4e-49, Method: Composition-based stats.
Identities = 52/220 (23%), Positives = 103/220 (46%), Gaps = 2/220 (0%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
D+S++ ++ VK ++ L I S+++W++ K + RR+ R+ + +
Sbjct: 103 ATDLSVWGMYQNADAVVKSVMVGLVIASVITWALFFSKGTELLMARRRLRKEQLSLANVA 162
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+LE K +N ++ + +S +++ + GI++R M+ A+A
Sbjct: 163 NLEAAAKIAENFDKQSISRLLLSEAQS-ERALSAASTDKEGIKERTSFRMERAVAAISRH 221
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
+ +L ++ + VG+ G V G+M F IA + N+ V PGI E+L++ LGL
Sbjct: 222 MGRGNGYLATIGAISPFVGLFGTVWGIMNSFIGIAHSQTTNLAVVAPGIAEALLATALGL 281
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ + YN F + Q+ A + +L R +
Sbjct: 282 MAAIPAVVIYNIFARVISSYRGQVGDMAAQAILLLGRDLD 321
>gi|330817740|ref|YP_004361445.1| Biopolymer transport protein [Burkholderia gladioli BSR3]
gi|327370133|gb|AEA61489.1| Biopolymer transport protein [Burkholderia gladioli BSR3]
Length = 244
Score = 198 bits (505), Expect = 4e-49, Method: Composition-based stats.
Identities = 54/228 (23%), Positives = 92/228 (40%), Gaps = 14/228 (6%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
M +YG+A ++ Q + I L I S+LSW VII K N + L R + E
Sbjct: 1 MESYGIA-------HVWAQGDFVTRFIAIALLIMSVLSWLVIIVKGWNVMRLGRLMKNAE 53
Query: 61 QLFWSGQSLETVCKSLKNHHNIGLAAIFMSA------MSEWKKSCDKGARSPIGIQDRID 114
Q FW + + L++ F++ +E + + + D +
Sbjct: 54 QSFWHSDEFDKGVQKLRDASPTTQDNPFLALALAGQEAAEHHQQTQPHLHDRMDVSDWVT 113
Query: 115 RMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG 174
R + + + + L+ L S+ S VG+ G V G+ I ++ + G
Sbjct: 114 RCLKDTMDDGVARMQSGLAILASIGSTAPFVGLFGTVWGIYHALLVIGATGQTSIDQVAG 173
Query: 175 -IIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+ ESLI GL V+IP+ + YN +K ++ FA+ A
Sbjct: 174 PVGESLIMTAFGLFVAIPAVLGYNALTRANKGIVTKLRRFAHGLHAYF 221
>gi|76817585|ref|YP_337083.1| MotA/TolQ/ExbB proton channel family protein [Burkholderia
pseudomallei 1710b]
gi|226199189|ref|ZP_03794750.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei Pakistan 9]
gi|76582058|gb|ABA51532.1| MotA/TolQ/ExbB proton channel family protein [Burkholderia
pseudomallei 1710b]
gi|225928788|gb|EEH24814.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei Pakistan 9]
Length = 234
Score = 198 bits (504), Expect = 5e-49, Method: Composition-based stats.
Identities = 53/213 (24%), Positives = 90/213 (42%), Gaps = 7/213 (3%)
Query: 16 LFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKS 75
++ Q + I L + SILSW VI+ K N I L+R ++ EQ FW +
Sbjct: 1 MWAQGDFVTRFIAIALLVMSILSWMVIVIKGWNVIRLKRLSKDAEQSFWHSDDFDEGVDK 60
Query: 76 LKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRID------RMMDVAIARELEEIT 129
L + F++ K++ D ++ + DR+D R + + + +
Sbjct: 61 LGRASSSSQDNPFLALALSGKEAADHHHQTQPHLHDRMDVSDWVTRCLKDTMDEGIARMQ 120
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCV 188
L+ L S+ S VG+ G V G+ I ++ + G + ESLI GL V
Sbjct: 121 GGLAILASIGSTAPFVGLFGTVWGIYHALLVIGATGQTSIDQVAGPVGESLIMTAFGLFV 180
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+IP+ + YN +K ++ FA+ A
Sbjct: 181 AIPAVLGYNALTRANKSVVSRLRRFAHGLHAYF 213
>gi|271498917|ref|YP_003331942.1| tonB-system energizer ExbB [Dickeya dadantii Ech586]
gi|270342472|gb|ACZ75237.1| tonB-system energizer ExbB [Dickeya dadantii Ech586]
Length = 311
Score = 198 bits (504), Expect = 5e-49, Method: Composition-based stats.
Identities = 44/223 (19%), Positives = 101/223 (45%), Gaps = 2/223 (0%)
Query: 5 GLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFW 64
GL D+S+ ++ + VK ++ L + S+++W++ KS + + +++ R Q
Sbjct: 71 GLMNTDLSVLGMYQHADVVVKTVMIGLLLASVVTWAIFFSKSASLMGAKKRIRREYQALE 130
Query: 65 SGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARE 124
++L+ ++ ++ + ++ + GI++R + +A
Sbjct: 131 DARTLDDAVDIAAVFKPGSVSLQLLTDARNEQALSER-SDDNGGIKERTAFRFERRVAAT 189
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISIL 183
++ +L ++ + +G+ G V G+M F IA + N+ V PGI E+L++
Sbjct: 190 GRQMGRGTGYLATVGAIAPFIGLFGTVWGIMNSFIGIAQSQTTNLAVVAPGIAEALLATA 249
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+GL +IP+ + YN F + + + A + + SR +
Sbjct: 250 IGLVAAIPAVVIYNVFARWTASYKAMVGDVAAQILLLQSRDLD 292
>gi|291618890|ref|YP_003521632.1| ExbB [Pantoea ananatis LMG 20103]
gi|291153920|gb|ADD78504.1| ExbB [Pantoea ananatis LMG 20103]
Length = 247
Score = 198 bits (504), Expect = 5e-49, Method: Composition-based stats.
Identities = 49/223 (21%), Positives = 100/223 (44%), Gaps = 4/223 (1%)
Query: 6 LAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS 65
L D+S++ ++ + VK ++ L + S+++W++ K +R+ + +
Sbjct: 6 LMQADLSVWGMYQHADIVVKVVMIGLLLASVVTWAIFFGKYAELSAAKRRLKREQLALGE 65
Query: 66 GQSLETVCKSLKNHHNIGLAAIFM-SAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARE 124
++L ++ + +A+ + A +E + S G GI++R ++ +A
Sbjct: 66 ARNLNDAARAAQQFKTASHSAVLLNDAQNELELSA--GVEDTAGIKERTAFRLERRVAAF 123
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISIL 183
FL ++ S VG+ G V G+M F IA + N+ V PGI E+L++
Sbjct: 124 CRHAGRGNGFLATIGSVAPFVGLFGTVWGIMNSFIGIAKTQTTNLAVVAPGIAEALLATA 183
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+GL +IP+ + YN F + + A + + SR +
Sbjct: 184 IGLVAAIPAVVIYNVFARMIANYKASLGDVAAQIMLLQSRDID 226
>gi|85716760|ref|ZP_01047728.1| ABC transporter, ATPase subunit [Nitrobacter sp. Nb-311A]
gi|85696478|gb|EAQ34368.1| ABC transporter, ATPase subunit [Nitrobacter sp. Nb-311A]
Length = 1014
Score = 198 bits (504), Expect = 5e-49, Method: Composition-based stats.
Identities = 53/222 (23%), Positives = 101/222 (45%), Gaps = 6/222 (2%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
D+S + +FMQ + VK ++ L S+++W++ + + V RR+ + +
Sbjct: 775 PQDLSPWGMFMQADIIVKAVMIGLAFASLVTWTIWLARGVELAASRRRAQSCLRKLERAG 834
Query: 68 SLETVCKSLKN--HHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
+L + ++ + +A +E ++S D S GI++R+ + A+
Sbjct: 835 TLAAARAEIAEGWTGKGPVSDLMEAAENECRRSND---LSSEGIKERLAIALSRIEAKAG 891
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILL 184
+I L ++ + VG+ G V G+M F I+ + N+ V PGI E+L++ L
Sbjct: 892 RDIARGTGLLATIGATAPFVGLFGTVWGIMNAFIGISHSKTTNLAVVAPGIAEALLATAL 951
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
GL +IP+ I YN F + + + E +SR E
Sbjct: 952 GLVAAIPAVIIYNVFARALSSYRALLSDASGEIIQHISRDLE 993
>gi|89899953|ref|YP_522424.1| MotA/TolQ/ExbB proton channel [Rhodoferax ferrireducens T118]
gi|89901448|ref|YP_523919.1| MotA/TolQ/ExbB proton channel [Rhodoferax ferrireducens T118]
gi|89344690|gb|ABD68893.1| MotA/TolQ/ExbB proton channel [Rhodoferax ferrireducens T118]
gi|89346185|gb|ABD70388.1| MotA/TolQ/ExbB proton channel [Rhodoferax ferrireducens T118]
Length = 230
Score = 198 bits (504), Expect = 5e-49, Method: Composition-based stats.
Identities = 69/225 (30%), Positives = 115/225 (51%), Gaps = 3/225 (1%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
D+SI L + + V+ ++ LL + S+ SW+ I +K ++ FE+ FWSG S
Sbjct: 3 QDLSILRLVLNASVVVQLVMLLLVVVSMASWAAIFRKLFALKRVKLLNDTFEREFWSGTS 62
Query: 69 LETVCKSLKN--HHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
L + + + L IF S M E++K ++ + D R M + REL+
Sbjct: 63 LNDLFSAAAQNARDSGPLERIFASGMREYQKLRERHITDASTLMDGARRAMRASYQRELD 122
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLG 185
+ LSFL S+ S +G+ G V G+M F +A + + ++ PGI E+L++ +G
Sbjct: 123 VVEANLSFLASVGSVSPYLGLFGTVWGIMHAFTGLASMQTVTLATVAPGIAEALVATAIG 182
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
L +IP+ +AYN+F D + A+++E F EFS IL R +
Sbjct: 183 LFAAIPAVVAYNRFAHDIDRIAIRLETFIEEFSNILQRNVSAQSA 227
>gi|307129122|ref|YP_003881138.1| membrane spanning protein in TonB-ExbB-ExbD complex [Dickeya
dadantii 3937]
gi|306526651|gb|ADM96581.1| membrane spanning protein in TonB-ExbB-ExbD complex [Dickeya
dadantii 3937]
Length = 312
Score = 198 bits (504), Expect = 5e-49, Method: Composition-based stats.
Identities = 43/222 (19%), Positives = 102/222 (45%), Gaps = 2/222 (0%)
Query: 6 LAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS 65
L D+S++ ++ + VK ++ L + S+++W++ KS + + +++ R Q
Sbjct: 73 LMSTDLSVWGMYQHADVVVKTVMIGLLLASVVTWAIFFGKSTSLMGAKKRIRREYQALED 132
Query: 66 GQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
++L+ ++ ++ ++ ++ + GI++R + +A
Sbjct: 133 ARTLDDALDISGVFKPGSVSLQLLADARNEQELSER-SDDNNGIKERTAFRFERRVAATG 191
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILL 184
++ +L ++ + +G+ G V G+M F IA + N+ V PGI E+L++ +
Sbjct: 192 RQMGRGTGYLATVGAIAPFIGLFGTVWGIMNSFIGIAQSQTTNLAVVAPGIAEALLATAI 251
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
GL +IP+ + YN F + + + A + + SR +
Sbjct: 252 GLVAAIPAVVIYNVFARWTAGYKAMVGDVAAQILLLQSRDLD 293
>gi|197119872|ref|YP_002140299.1| TolQ-like biopolymer transport membrane proton channel [Geobacter
bemidjiensis Bem]
gi|197089232|gb|ACH40503.1| TolQ-related biopolymer transport membrane proton channel
[Geobacter bemidjiensis Bem]
Length = 224
Score = 198 bits (504), Expect = 5e-49, Method: Composition-based stats.
Identities = 56/204 (27%), Positives = 90/204 (44%), Gaps = 9/204 (4%)
Query: 34 FSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMS 93
FS++SW +I K + F FW + + + L N L +F
Sbjct: 21 FSVVSWGIIFYKLLQVSRANGASERFLDFFWKAKRFDAISGQLDRFANSPLTVLFQEGYG 80
Query: 94 EWKKSCDK--------GARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLV 145
E KK +K + +G D I R + A E+ + + L+FL + + +
Sbjct: 81 ELKKLQEKIEEKADPTSISTDLGGIDNIARALRRATTSEITRLEKYLTFLATTGATAPFI 140
Query: 146 GILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSK 204
G+ G V G+M F+ I S ++ V PGI E+LI+ +GL +IP+ + YN F K
Sbjct: 141 GLFGTVWGIMTAFEKIGQTGSASLAVVAPGIAEALIATAIGLVAAIPAVMGYNHFQHKIK 200
Query: 205 KFAMQMEGFANEFSAILSRQTEGN 228
+M+ F+ EF I+ R G
Sbjct: 201 VLISEMDSFSTEFLNIVQRNFAGR 224
>gi|256828397|ref|YP_003157125.1| MotA/TolQ/ExbB proton channel [Desulfomicrobium baculatum DSM 4028]
gi|256577573|gb|ACU88709.1| MotA/TolQ/ExbB proton channel [Desulfomicrobium baculatum DSM 4028]
Length = 263
Score = 198 bits (504), Expect = 6e-49, Method: Composition-based stats.
Identities = 58/223 (26%), Positives = 112/223 (50%), Gaps = 4/223 (1%)
Query: 7 AIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG 66
+ + + + + V+ ++TLL I S++SWS+I K + RR+ LF +
Sbjct: 33 GMSQMGFWDMISNATVVVQGVMTLLAIMSLISWSIIFFKIIQINVGRRKALRERALFQNA 92
Query: 67 QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQ---DRIDRMMDVAIAR 123
+L ++L+ N L I + E+++ + + D + R+++ ++
Sbjct: 93 TNLADGVQTLREQGNSALYPIAKRGLQEFRRLEQSVIHPNLKFRVAGDNLRRVLEQGVSE 152
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISI 182
L E++ LSFL + ++A +G+ G V G+M F +I + + ++ PGI E+L++
Sbjct: 153 GLGEMSRSLSFLATCANAAPFIGLFGTVWGIMNSFHAIGQMKTAALAAVAPGISEALVAT 212
Query: 183 LLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+GL V+IP++IAYN F+ +ME FA+EF +
Sbjct: 213 AIGLAVAIPATIAYNTFLGMITTVHTEMECFASEFLNRAQLEL 255
>gi|37527796|ref|NP_931141.1| biopolymer transport protein ExbB [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|36787232|emb|CAE16313.1| Biopolymer transport protein ExbB [Photorhabdus luminescens subsp.
laumondii TTO1]
Length = 344
Score = 198 bits (504), Expect = 6e-49, Method: Composition-based stats.
Identities = 46/220 (20%), Positives = 101/220 (45%), Gaps = 2/220 (0%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
D+SI+ ++ + VK ++ L I S+++W++ K + R+ R+ +
Sbjct: 119 ATDLSIWGMYQNADIVVKTVMIGLVIASVITWALFFSKGTELLASGRRLRKERLALTDVK 178
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
SL+ + + + ++ + +S + ++ + + ++R ++ ++A
Sbjct: 179 SLDQAAEIAEGFNKHSISRLLLSEVQAERQLSSE-STDLNSTKERAAFRLERSVAAISRH 237
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
+ +L ++ + VG+ G V G+M F IA + N+ V PGI E+L++ LGL
Sbjct: 238 MGRGNGYLATIGAISPFVGLFGTVWGIMNSFIGIAHSQTTNLAVVAPGIAEALLATALGL 297
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ + YN F + Q+ A + +L R +
Sbjct: 298 VAAIPAVVIYNIFARMIVAYRGQVGDMAAQSILLLGRDLD 337
>gi|120611968|ref|YP_971646.1| MotA/TolQ/ExbB proton channel [Acidovorax citrulli AAC00-1]
gi|120590432|gb|ABM33872.1| outer membrane transport energization protein ExbB [Acidovorax
citrulli AAC00-1]
Length = 238
Score = 198 bits (503), Expect = 6e-49, Method: Composition-based stats.
Identities = 46/214 (21%), Positives = 88/214 (41%), Gaps = 4/214 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
I +++Q + + LL S+ SW VI+ K+++ I ++ R FW +
Sbjct: 5 FGIANVWIQGDFVTRAVAVLLLGMSLASWIVILIKALDIIKFKKHARGARD-FWHSEDFA 63
Query: 71 TVCKSLKNHHNIGLAAIFMSA--MSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ L N + + + + ++ + + D I R + I +
Sbjct: 64 AGMEKLGNDPSNPFRHLALEGREATAHHRNTKAHLHDSLDVSDWITRSLRNCIDEFTARL 123
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLC 187
L+ L S+ S +G+ G V G+ +I + + + G I E+LI LGL
Sbjct: 124 QSGLAVLASVGSTAPFIGLFGTVWGIYHALVAIGASGQSTIDKVAGPIGEALIMTALGLA 183
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
V+IP+ + YN + +K + FA++ A
Sbjct: 184 VAIPAVLGYNALVRGNKSILNGLNSFAHDLHAYF 217
>gi|114799599|ref|YP_758885.1| protein TolQ [Hyphomonas neptunium ATCC 15444]
gi|114739773|gb|ABI77898.1| protein TolQ [Hyphomonas neptunium ATCC 15444]
Length = 236
Score = 198 bits (503), Expect = 6e-49, Method: Composition-based stats.
Identities = 68/218 (31%), Positives = 110/218 (50%), Gaps = 3/218 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D S+ +L M VK ++ LF+ S+ SW VI +K L++ R+FE+ FWSG++
Sbjct: 14 DFSLISLLMAADPVVKLVLLALFLASVWSWIVIGEKFFKLGGLKKSSRDFEEAFWSGRA- 72
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKG-ARSPIGIQDRIDRMMDVAIARELEEI 128
+ + +F+SA EW + + I R +R M A+ RE+
Sbjct: 73 GEIDMRPGQGGKDPASRVFISAAREWADAGKGPVSVEATAIVSRAERSMRAAVDREIGRA 132
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLC 187
+ LS L ++ SA +G+ G V G+M F +IA ++ ++ G I E+L + LGL
Sbjct: 133 SAGLSVLATIGSASPFIGLFGTVWGIMNAFLNIAEQQDTSLGTVAGPIAEALFATGLGLI 192
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ I YNKF D K Q++ F+ + LSR+
Sbjct: 193 AAIPAVIFYNKFTSDLTKLGDQLDTFSQDVLVRLSRRA 230
>gi|239832740|ref|ZP_04681069.1| tonB-system energizer ExbB [Ochrobactrum intermedium LMG 3301]
gi|239825007|gb|EEQ96575.1| tonB-system energizer ExbB [Ochrobactrum intermedium LMG 3301]
Length = 338
Score = 198 bits (503), Expect = 7e-49, Method: Composition-based stats.
Identities = 52/225 (23%), Positives = 105/225 (46%), Gaps = 3/225 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
D+S + +FM VK ++ L + S+ +W+V + KS+ RR+ + ++
Sbjct: 104 PHDLSPWGMFMAADWVVKAVMIGLALASLATWTVWVAKSLELAGARRRAYKALKVIGHSA 163
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARS-PIGIQDRIDRMMDVAIARELE 126
+L ++L G A + +A E + S AR+ G+++R+ + A+
Sbjct: 164 TLAEAVRALDGAKGPG-AVLVRAAEDEVRLSGPALARAGGEGLKERVSSRLSRIEAKAGR 222
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLG 185
+++ L ++ S VG+ G V G+M F +I+ + N+ V PGI E+L++ +G
Sbjct: 223 RLSKGTGVLATIGSVAPFVGLFGTVWGIMNSFINISQAQTTNLAVVAPGIAEALLATAIG 282
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
L +IP+ + YN F + + + ++SR + +
Sbjct: 283 LVAAIPAVVIYNVFARSITGYRSLLADASAGVERLVSRDLDFRTA 327
>gi|218887452|ref|YP_002436773.1| protein TolQ [Desulfovibrio vulgaris str. 'Miyazaki F']
gi|218758406|gb|ACL09305.1| protein TolQ [Desulfovibrio vulgaris str. 'Miyazaki F']
Length = 231
Score = 197 bits (502), Expect = 8e-49, Method: Composition-based stats.
Identities = 55/219 (25%), Positives = 107/219 (48%), Gaps = 2/219 (0%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+ I ++ Q L K I+ LL + SI SW+++ QK +R+ + F + L
Sbjct: 1 MDILSILAQATLVAKFILVLLVLMSIGSWTLMFQKWFALKAAQRKAADGLDRFQKARDLR 60
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
+SL L + ++E+ + + G+ + + D + R + + E+ ++
Sbjct: 61 EAVQSLGGDAASPLYHVAQQGVAEFNRLKEAGSSGDV-VADNVRRSLRQGVGNEMTRLSA 119
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCVS 189
LSFL + ++ +G+ G V G+M F +I S ++ ++ PGI E+LI+ +GL V+
Sbjct: 120 SLSFLATAANTAPFIGLFGTVWGIMYSFHAIGQMKSASLATVAPGISEALIATAIGLFVA 179
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
IP+++ YN F+ +Q+ FA F + R+ +
Sbjct: 180 IPATVGYNIFLGMISSIEVQLVNFAGAFLNRVQREINAH 218
>gi|296161441|ref|ZP_06844247.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. Ch1-1]
gi|295888256|gb|EFG68068.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. Ch1-1]
Length = 262
Score = 197 bits (502), Expect = 8e-49, Method: Composition-based stats.
Identities = 56/229 (24%), Positives = 96/229 (41%), Gaps = 15/229 (6%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
M +YGLA ++ + +CI++ L I S+LSW+VI+ K + ++R R+ E
Sbjct: 1 MQHYGLA-------NVWESGDIVTRCILSTLLIMSVLSWTVILVKLWTILRIKRVTRQAE 53
Query: 61 QLFWSGQSLETVCKSLKNHHNIGLAA-------IFMSAMSEWKKSCDKGARSPIGIQDRI 113
FW E KSL H + + + + + I + D I
Sbjct: 54 AQFWRADHFEDGLKSLGAHASKSVRDNPLLALALAGEEAAAHHQQTQSHLHDRIDVSDWI 113
Query: 114 DRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP 173
R + + + + L+ L S+ S VG+ G V G+ I ++ +
Sbjct: 114 TRRLQDTMDDAIARMQSGLAVLASIGSTAPFVGLFGTVWGIYHALILIGETGQTSIDHVA 173
Query: 174 G-IIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
G + ESLI GL V+IP+ + YN +K +++ FA+ A
Sbjct: 174 GPVGESLIMTAFGLFVAIPAVLGYNGLTRANKSVVTRLKRFAHGLHAYF 222
>gi|121594748|ref|YP_986644.1| MotA/TolQ/ExbB proton channel [Acidovorax sp. JS42]
gi|222110639|ref|YP_002552903.1| mota/tolq/exbb proton channel [Acidovorax ebreus TPSY]
gi|120606828|gb|ABM42568.1| outer membrane transport energization protein ExbB [Acidovorax sp.
JS42]
gi|221730083|gb|ACM32903.1| MotA/TolQ/ExbB proton channel [Acidovorax ebreus TPSY]
Length = 238
Score = 197 bits (502), Expect = 8e-49, Method: Composition-based stats.
Identities = 44/214 (20%), Positives = 89/214 (41%), Gaps = 4/214 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
I +++Q + + LL S+ SW VII K+++ + ++ R+ FW +
Sbjct: 5 FGIANVWVQGDFVTRAVAVLLIGMSLASWIVIIIKALDILKFKKHARQARD-FWHSEDFA 63
Query: 71 TVCKSLKNHHNIGLAAIFMSA--MSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
L + + + + ++ ++ + + D + R + I +
Sbjct: 64 AGLTKLGSDPSNPFRHLALEGREATQHHRNTQAHLHDSLDVSDWVTRCLRNCIDEFTARV 123
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLC 187
L+ L S+ S +G+ G V G+ +I + + + G I E+LI LGL
Sbjct: 124 QSGLAILASVGSTAPFIGLFGTVWGIYHALVAIGASGQSTIDKVAGPIGEALIMTALGLA 183
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
V+IP+ + YN + +K + FA++ A
Sbjct: 184 VAIPAVLGYNALVRGNKSILHSLNSFAHDLHAYF 217
>gi|319762693|ref|YP_004126630.1| protein tolq [Alicycliphilus denitrificans BC]
gi|330824834|ref|YP_004388137.1| protein TolQ [Alicycliphilus denitrificans K601]
gi|317117254|gb|ADU99742.1| protein TolQ [Alicycliphilus denitrificans BC]
gi|329310206|gb|AEB84621.1| protein TolQ [Alicycliphilus denitrificans K601]
Length = 233
Score = 197 bits (502), Expect = 8e-49, Method: Composition-based stats.
Identities = 73/228 (32%), Positives = 118/228 (51%), Gaps = 3/228 (1%)
Query: 6 LAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS 65
+ D+SI +L + V+ ++ LL S+ SW+ I +K ++ +FE+ FWS
Sbjct: 1 MNSQDMSILSLVLNASWVVQLVMLLLLAVSVASWAAIFRKLFALKRVKALNEDFERDFWS 60
Query: 66 GQSLETVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAR 123
G SL + + ++ + IF S M E++K ++ P + D R M + R
Sbjct: 61 GTSLNELFAAAAHNAKSAGPMERIFASGMREYQKLRERRITDPGTLLDGARRAMRASFQR 120
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISI 182
E++ I LSFLGS++S VG+ G V G+M F AG + ++ PGI E+L++
Sbjct: 121 EMDVIESSLSFLGSVASVSPYVGLFGTVWGIMHAFTGFAGMEQVTLATVAPGIAEALVAT 180
Query: 183 LLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
+GL +IP+ IAYN+F D + A+ E F EFS IL R + +
Sbjct: 181 AIGLFAAIPAVIAYNRFARDIDRVAIHQETFIEEFSNILQRNLGAHPA 228
>gi|77163680|ref|YP_342205.1| MotA/TolQ/ExbB proton channel [Nitrosococcus oceani ATCC 19707]
gi|254435268|ref|ZP_05048775.1| protein TolQ [Nitrosococcus oceani AFC27]
gi|76881994|gb|ABA56675.1| Cell division and transport-associated protein TolQ [Nitrosococcus
oceani ATCC 19707]
gi|207088379|gb|EDZ65651.1| protein TolQ [Nitrosococcus oceani AFC27]
Length = 225
Score = 197 bits (502), Expect = 9e-49, Method: Composition-based stats.
Identities = 66/222 (29%), Positives = 115/222 (51%), Gaps = 3/222 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
+D+S+ L V+ +I +L I S+++W++I +K R + EFE FWSG+
Sbjct: 2 TVDLSLLDLITGASFLVQLVILILLIISVIAWTLIFRKRSELKQAREEADEFEDRFWSGK 61
Query: 68 SLETVCKSLKNH--HNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
L ++ L G+ IF++ SE+ + + + D R M V++ARE+
Sbjct: 62 ELNSLYAELAAQELPPGGMEGIFLAGFSEFARLRKQAGVEHRTVLDGTQRAMRVSLAREI 121
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILL 184
+ + L FL + S +G+ G V G+M F+ + + + + PGI E+LI+ +
Sbjct: 122 DMLEASLPFLATAGSTSPYIGLFGTVWGIMNSFRGLGNAHQATLAMVAPGIAEALIATAM 181
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
GL +IP+ IAYN++ + ++ A + + F EFS IL RQ
Sbjct: 182 GLFAAIPAVIAYNRYAYEVERLANRYDTFVEEFSTILQRQIH 223
>gi|262373303|ref|ZP_06066582.1| TolQ [Acinetobacter junii SH205]
gi|262313328|gb|EEY94413.1| TolQ [Acinetobacter junii SH205]
Length = 291
Score = 197 bits (502), Expect = 9e-49, Method: Composition-based stats.
Identities = 52/221 (23%), Positives = 92/221 (41%), Gaps = 11/221 (4%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YGL AL+ + L K + +L + SI +W +I+ K ++R E E+
Sbjct: 66 NPYGLE-------ALWREGDLVAKTTLFILVLMSIGTWYIILSKLFQQSKIKRHGTEAER 118
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
FW +L + +SL I + K D I + + AI
Sbjct: 119 NFWEADTLNSAKESLDPSSTYRY--IAEKGIHS-TKHHDGTLLERIDFNTWVTISIQRAI 175
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLI 180
+ + L+FL ++ S VG+ G V G+ +I ++ + G + E+LI
Sbjct: 176 DKVQSHLGNGLAFLATVGSTAPFVGLFGTVWGIYHALTAIGISGQASIDKVAGPVGEALI 235
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+GL V++P+ + YN +K + F ++ A+L
Sbjct: 236 MTAIGLAVAVPAVLGYNWLTRRNKAVMDNVRSFGSDLHAVL 276
>gi|260568758|ref|ZP_05839226.1| ExbB family protein [Brucella suis bv. 4 str. 40]
gi|261754080|ref|ZP_05997789.1| biopolymer transporter ExbB [Brucella suis bv. 3 str. 686]
gi|260154142|gb|EEW89224.1| ExbB family protein [Brucella suis bv. 4 str. 40]
gi|261743833|gb|EEY31759.1| biopolymer transporter ExbB [Brucella suis bv. 3 str. 686]
Length = 319
Score = 197 bits (502), Expect = 9e-49, Method: Composition-based stats.
Identities = 54/225 (24%), Positives = 103/225 (45%), Gaps = 3/225 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
D+S + +FM VK ++ L I S+ +W+V + KS+ RR+ + ++
Sbjct: 85 PHDLSPWGMFMAADWVVKAVMIGLAIASLATWTVWVAKSLELAGARRRANKALKIIGHSA 144
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARS-PIGIQDRIDRMMDVAIARELE 126
+L +L G AA +A E + S AR+ G+++R+ + A+
Sbjct: 145 TLNDAVHALDGAKGPG-AAFVRAAEDEVRLSGPALARAGGEGLKERVASRLSRIEAKAGR 203
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLG 185
+ + L ++ S VG+ G V G+M F +I+ + N+ V PGI E+L++ +G
Sbjct: 204 RLAKGTGILATIGSVAPFVGLFGTVWGIMNSFINISEAQTTNLAVVAPGIAEALLATAIG 263
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
L +IP+ + YN F + + + ++SR + +
Sbjct: 264 LVAAIPAVVIYNVFARSITGYRALLADASASVERLVSRDLDFRTA 308
>gi|238028093|ref|YP_002912324.1| Biopolymer transport protein [Burkholderia glumae BGR1]
gi|237877287|gb|ACR29620.1| Biopolymer transport protein [Burkholderia glumae BGR1]
Length = 246
Score = 197 bits (502), Expect = 9e-49, Method: Composition-based stats.
Identities = 54/228 (23%), Positives = 98/228 (42%), Gaps = 14/228 (6%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
M +YG+A ++ Q + I +L + S+LSW VI+ K N I L R + +
Sbjct: 1 MQSYGIA-------HVWAQGDFVTRAIAIVLLVMSVLSWLVIVVKGWNAIRLGRLMKNAD 53
Query: 61 QLFWSGQSLETVCKSLKNH----HNIGLAAIFMSA--MSEWKKSCDKGARSPIGIQDRID 114
Q FW + + L++ + L A+ ++ +E + + + + I
Sbjct: 54 QAFWHSDEFDKGVQKLRDAAPNVQDNPLLALALAGQEAAEHHQQTQPHLHDRMDVSEWIT 113
Query: 115 RMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG 174
R + + + + L+ L S+ S VG+ G V G+ +I ++ + G
Sbjct: 114 RCLKDTMDGSVARMQSGLAVLASIGSTAPFVGLFGTVWGIYHALLTIGATGQTSIDQVAG 173
Query: 175 -IIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+ ESLI GL V+IP+ + YN +K F ++ FA+ A
Sbjct: 174 PVGESLIMTAFGLFVAIPAVLGYNALTRTNKGFVTKLRRFAHGLHAYF 221
>gi|225628238|ref|ZP_03786272.1| tonB-system energizer ExbB [Brucella ceti str. Cudo]
gi|237816045|ref|ZP_04595041.1| tonB-system energizer ExbB [Brucella abortus str. 2308 A]
gi|260547212|ref|ZP_05822950.1| ExbB protein [Brucella abortus NCTC 8038]
gi|260565827|ref|ZP_05836310.1| ExbB family protein [Brucella melitensis bv. 1 str. 16M]
gi|260755371|ref|ZP_05867719.1| biopolymer transporter ExbB [Brucella abortus bv. 6 str. 870]
gi|260758592|ref|ZP_05870940.1| biopolymer transporter ExbB [Brucella abortus bv. 4 str. 292]
gi|260762424|ref|ZP_05874761.1| biopolymer transporter ExbB [Brucella abortus bv. 2 str. 86/8/59]
gi|260884387|ref|ZP_05896001.1| ExbB [Brucella abortus bv. 9 str. C68]
gi|261219261|ref|ZP_05933542.1| biopolymer transporter ExbB [Brucella ceti M13/05/1]
gi|261222797|ref|ZP_05937078.1| ExbB [Brucella ceti B1/94]
gi|261315961|ref|ZP_05955158.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|261316176|ref|ZP_05955373.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261322322|ref|ZP_05961519.1| ExbB [Brucella ceti M644/93/1]
gi|261325712|ref|ZP_05964909.1| ExbB [Brucella neotomae 5K33]
gi|261757325|ref|ZP_06001034.1| biopolymer transporter ExbB [Brucella sp. F5/99]
gi|265987240|ref|ZP_06099797.1| ExbB [Brucella pinnipedialis M292/94/1]
gi|265991707|ref|ZP_06104264.1| ExbB [Brucella melitensis bv. 1 str. Rev.1]
gi|265995544|ref|ZP_06108101.1| ExbB [Brucella melitensis bv. 3 str. Ether]
gi|265998755|ref|ZP_06111312.1| ExbB [Brucella ceti M490/95/1]
gi|297248943|ref|ZP_06932651.1| biopolymer transporter ExbB [Brucella abortus bv. 5 str. B3196]
gi|12802721|gb|AAK08069.1| ExbB [Brucella melitensis]
gi|225616084|gb|EEH13132.1| tonB-system energizer ExbB [Brucella ceti str. Cudo]
gi|237788708|gb|EEP62920.1| tonB-system energizer ExbB [Brucella abortus str. 2308 A]
gi|260095577|gb|EEW79455.1| ExbB protein [Brucella abortus NCTC 8038]
gi|260151200|gb|EEW86295.1| ExbB family protein [Brucella melitensis bv. 1 str. 16M]
gi|260668910|gb|EEX55850.1| biopolymer transporter ExbB [Brucella abortus bv. 4 str. 292]
gi|260672850|gb|EEX59671.1| biopolymer transporter ExbB [Brucella abortus bv. 2 str. 86/8/59]
gi|260675479|gb|EEX62300.1| biopolymer transporter ExbB [Brucella abortus bv. 6 str. 870]
gi|260873915|gb|EEX80984.1| ExbB [Brucella abortus bv. 9 str. C68]
gi|260921381|gb|EEX88034.1| ExbB [Brucella ceti B1/94]
gi|260924350|gb|EEX90918.1| biopolymer transporter ExbB [Brucella ceti M13/05/1]
gi|261295012|gb|EEX98508.1| ExbB [Brucella ceti M644/93/1]
gi|261295399|gb|EEX98895.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261301692|gb|EEY05189.1| ExbB [Brucella neotomae 5K33]
gi|261304987|gb|EEY08484.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|261737309|gb|EEY25305.1| biopolymer transporter ExbB [Brucella sp. F5/99]
gi|262553444|gb|EEZ09213.1| ExbB [Brucella ceti M490/95/1]
gi|262766828|gb|EEZ12446.1| ExbB [Brucella melitensis bv. 3 str. Ether]
gi|263002663|gb|EEZ15066.1| ExbB [Brucella melitensis bv. 1 str. Rev.1]
gi|264659437|gb|EEZ29698.1| ExbB [Brucella pinnipedialis M292/94/1]
gi|297174076|gb|EFH33433.1| biopolymer transporter ExbB [Brucella abortus bv. 5 str. B3196]
Length = 319
Score = 197 bits (502), Expect = 1e-48, Method: Composition-based stats.
Identities = 54/225 (24%), Positives = 103/225 (45%), Gaps = 3/225 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
D+S + +FM VK ++ L I S+ +W+V + KS+ RR+ + ++
Sbjct: 85 PHDLSPWGMFMAADWVVKAVMIGLAIASLATWTVWVAKSLELAGARRRANKALKIIGHSA 144
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARS-PIGIQDRIDRMMDVAIARELE 126
+L +L G AA +A E + S AR+ G+++R+ + A+
Sbjct: 145 TLNDAVHALDGAKGPG-AAFVRAAEDEVRLSGPALARAGGEGLKERVASRLSRIEAKAGR 203
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLG 185
+ + L ++ S VG+ G V G+M F +I+ + N+ V PGI E+L++ +G
Sbjct: 204 RLAKGTGILATIGSVAPFVGLFGTVWGIMNSFINISEAQTTNLAVVAPGIAEALLATAIG 263
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
L +IP+ + YN F + + + ++SR + +
Sbjct: 264 LVAAIPAVVIYNVFARSITGYRALLADASAGVERLVSRDLDFRTA 308
>gi|83950091|ref|ZP_00958824.1| proton transporter TolQ [Roseovarius nubinhibens ISM]
gi|83837990|gb|EAP77286.1| proton transporter TolQ [Roseovarius nubinhibens ISM]
Length = 201
Score = 197 bits (502), Expect = 1e-48, Method: Composition-based stats.
Identities = 73/200 (36%), Positives = 109/200 (54%), Gaps = 1/200 (0%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAI 87
+ +L I S +WS+IIQK + + R + F+Q FWSG+ L+ + + + +
Sbjct: 1 MLMLIIASFWAWSIIIQKLIMYRKARAEAERFDQRFWSGEPLDELFDEIGTEASGQSERV 60
Query: 88 FMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGI 147
F + M+EW++S RIDR MDVAI +E E++ LS L ++ S VG+
Sbjct: 61 FAAGMTEWRRSHRNDGGMIANATARIDRSMDVAIVKESEDLQSGLSVLATVGSTAPFVGL 120
Query: 148 LGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKF 206
G V G+M F IA + N+ V PGI E+L++ LGL +IP+ I YNK D +
Sbjct: 121 FGTVWGIMHAFIGIAEEQNTNLAVVAPGIAEALLATGLGLLAAIPAVIFYNKLSADVDRI 180
Query: 207 AMQMEGFANEFSAILSRQTE 226
E FA+EF+ ILSRQ +
Sbjct: 181 VAGYEAFADEFATILSRQLD 200
>gi|319763204|ref|YP_004127141.1| mota/tolq/exbb proton channel [Alicycliphilus denitrificans BC]
gi|330825398|ref|YP_004388701.1| MotA/TolQ/ExbB proton channel [Alicycliphilus denitrificans K601]
gi|317117765|gb|ADV00254.1| MotA/TolQ/ExbB proton channel [Alicycliphilus denitrificans BC]
gi|329310770|gb|AEB85185.1| MotA/TolQ/ExbB proton channel [Alicycliphilus denitrificans K601]
Length = 239
Score = 197 bits (501), Expect = 1e-48, Method: Composition-based stats.
Identities = 44/214 (20%), Positives = 86/214 (40%), Gaps = 4/214 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
I +++Q + + LL S+ SW VII K+++ + ++ R+ FW +
Sbjct: 5 FGIANVWIQGDFVTRAVAVLLLGMSLASWIVIIIKALDIVRYKKHARQARD-FWHSEDFA 63
Query: 71 TVCKSLKNHHNIGLAAIFMSA--MSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
L + + + ++ + + D + R + I +
Sbjct: 64 AGLTKLGADPANPFRHLALEGREATAHHRNTQAHLHDSLDVSDWVTRCLRNCIDEFTARL 123
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLC 187
L+ L S+ S +G+ G V G+ +I + + + G I E+LI LGL
Sbjct: 124 QSGLAILASVGSTAPFIGLFGTVWGIYHALVAIGASGQSTIDKVAGPIGEALIMTALGLA 183
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
V+IP+ + YN + +K + FA++ A
Sbjct: 184 VAIPAVLGYNALVRGNKSVLSSLNSFAHDLHAYF 217
>gi|323173751|gb|EFZ59380.1| tonB-system energizer ExbB [Escherichia coli LT-68]
gi|323188563|gb|EFZ73848.1| tonB-system energizer ExbB [Escherichia coli RN587/1]
Length = 230
Score = 197 bits (501), Expect = 1e-48, Method: Composition-based stats.
Identities = 53/217 (24%), Positives = 103/217 (47%), Gaps = 4/217 (1%)
Query: 16 LFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKS 75
++ + VKC++ L + S+++W++ KSV F +R+ + +QL +SL
Sbjct: 1 MYQHADIVVKCVMIGLILASVVTWAIFFSKSVEFFNQKRRLKREQQLLAEARSLNQANDI 60
Query: 76 LKNHHNIGLA-AIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSF 134
+ + L+ + A +E + S +G+ GI++R ++ +A ++ +
Sbjct: 61 AADFGSKSLSLHLLNEAQNELELS--EGSDDNEGIKERTSFRLERRVAAVGRQMGRGNGY 118
Query: 135 LGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSS 193
L ++ + VG+ G V G+M F IA + N+ V PGI E+L++ +GL +IP+
Sbjct: 119 LATIGAISPFVGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGIAEALLATAIGLVAAIPAV 178
Query: 194 IAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
+ YN F F + A + + SR + S
Sbjct: 179 VIYNVFARQIGGFKAMLGDVAAQVLLLQSRDLDLEAS 215
>gi|212704942|ref|ZP_03313070.1| hypothetical protein DESPIG_03009 [Desulfovibrio piger ATCC 29098]
gi|212671606|gb|EEB32089.1| hypothetical protein DESPIG_03009 [Desulfovibrio piger ATCC 29098]
Length = 231
Score = 197 bits (501), Expect = 1e-48, Method: Composition-based stats.
Identities = 58/221 (26%), Positives = 109/221 (49%), Gaps = 2/221 (0%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
M+ S F++ Q L K ++ +L + S+ SW ++IQK++ R+ + LF S
Sbjct: 1 MEFSFFSMISQASLVAKIVLCILVLMSVGSWGMMIQKTLALNAAYRKALQGTDLFEKAPS 60
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
L SL + L + + E+ +S + G S I + D + R + +A E+ +
Sbjct: 61 LREAVLSLGSDRASPLYFVAHQGVMEFNRSKEAGNSSEI-VVDNVRRSLRQGVASEMARL 119
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLC 187
LS L + ++ +G+ G V G+M F SI S ++ ++ PGI E+L++ +GL
Sbjct: 120 ERSLSLLATTANTAPFIGLFGTVWGIMHSFHSIGMLKSASLATVAPGISEALVATAIGLG 179
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
V++P++I +N F+ + + FA F + R+ +
Sbjct: 180 VAVPATIGFNIFMGKLSQVDTLLVNFAGVFLNRVQRELNAH 220
>gi|222106934|ref|YP_002547725.1| tonB-system energizer ExbB [Agrobacterium vitis S4]
gi|221738113|gb|ACM39009.1| tonB-system energizer ExbB [Agrobacterium vitis S4]
Length = 341
Score = 197 bits (501), Expect = 1e-48, Method: Composition-based stats.
Identities = 51/221 (23%), Positives = 99/221 (44%), Gaps = 3/221 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
D+S +FM VK ++ L + S+ +W++++ K++ + + R + +
Sbjct: 104 PHDLSPVGMFMAADWVVKSVMIALGLASVATWTILLVKTLQLSGSKARLRRGLAVLQEAR 163
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSC-DKGARSPIGIQDRIDRMMDVAIARELE 126
SL +L+ + + + A E K S G+++R+ + +R
Sbjct: 164 SLSQAAGALQKRRGT-VPDMLLIAARELKLSEPALDYAGNDGVKERVSSALSRIESRAGR 222
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLG 185
+T L ++ S G VG+ G V G+M F I+ + N+ V PGI E+L++ +G
Sbjct: 223 RMTAGTGILATIGSIGPFVGLFGTVWGIMNSFIGISQSQTTNLAVVAPGIAEALLATAIG 282
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
L +IP+ + YN F + Q+ A ++SR +
Sbjct: 283 LVAAIPAVVIYNVFARAVTGYRQQLLDAATAVERLVSRDLD 323
>gi|227112807|ref|ZP_03826463.1| biopolymer transport protein [Pectobacterium carotovorum subsp.
brasiliensis PBR1692]
Length = 239
Score = 197 bits (501), Expect = 1e-48, Method: Composition-based stats.
Identities = 48/220 (21%), Positives = 100/220 (45%), Gaps = 4/220 (1%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
D+S++ ++ VK ++ L + S+++W++ KSV +R+ R ++
Sbjct: 3 TDLSVWGMYQHADAVVKTVMIGLLLASVITWAIFFSKSVEMSGAKRRLRREYLALEQAKT 62
Query: 69 LETVCKSLKNHHNIGLA-AIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
L+ ++ +A + + A +E + S + GI++R ++ +A
Sbjct: 63 LDDALETADAFKAGSVAQQLLIDAQNELELSAR--SDDNNGIKERTAFRLERRVAATGRH 120
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
+ +L ++ + VG+ G V G+M F IA + N+ V PGI E+L++ +GL
Sbjct: 121 MGRGNGYLATVGAVAPFVGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGIAEALLATAIGL 180
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ + YN F + + A + + SR +
Sbjct: 181 VAAIPAVVIYNVFARSIAGYKAMVGDVAAQVLLLQSRDLD 220
>gi|220904135|ref|YP_002479447.1| protein TolQ [Desulfovibrio desulfuricans subsp. desulfuricans str.
ATCC 27774]
gi|219868434|gb|ACL48769.1| protein TolQ [Desulfovibrio desulfuricans subsp. desulfuricans str.
ATCC 27774]
Length = 231
Score = 197 bits (501), Expect = 1e-48, Method: Composition-based stats.
Identities = 58/221 (26%), Positives = 106/221 (47%), Gaps = 2/221 (0%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
M+ S F++ Q L K ++ LL + SI SW ++IQK + E F +
Sbjct: 1 MEFSFFSMIAQASLVAKAVLALLVVMSITSWGLMIQKFFALSAANNKALEGTTGFEKAPN 60
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
L +SL + + L I + E+ +S + G S + + D + R + + EL +
Sbjct: 61 LREAVQSLGSDPSSPLYYIAHQGVLEFNRSKELGNSSEV-VVDNVRRALRQGVGSELSRL 119
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLC 187
LS L + ++ +G+ G V G+M F SI S ++ ++ PGI E+L++ +GL
Sbjct: 120 QRSLSLLATTANTAPFIGLFGTVWGIMSSFHSIGMLKSASLATVAPGISEALVATAIGLA 179
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
V++P++I +N F+ + + FA F + R+ +
Sbjct: 180 VAVPATIGFNVFMGKLSQVDTLLVNFAGVFLNRVQRELNAH 220
>gi|265999347|ref|ZP_05465915.2| ExbB [Brucella melitensis bv. 2 str. 63/9]
gi|263093380|gb|EEZ17449.1| ExbB [Brucella melitensis bv. 2 str. 63/9]
Length = 319
Score = 196 bits (500), Expect = 1e-48, Method: Composition-based stats.
Identities = 54/225 (24%), Positives = 103/225 (45%), Gaps = 3/225 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
D+S + +FM VK ++ L I S+ +W+V + KS+ RR+ + ++
Sbjct: 85 PHDLSPWGMFMAADWVVKAVMIGLAIASLATWTVWVAKSLELAGARRRANKALKIIGHSA 144
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARS-PIGIQDRIDRMMDVAIARELE 126
+L +L G AA +A E + S AR+ G+++R+ + A+
Sbjct: 145 TLNDAVHALDGAKGPG-AAFVRAAEDEVRLSGPALARAGGEGLKERVASRLSRIEAKAGR 203
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLG 185
+ + L ++ S VG+ G V G+M F +I+ + N+ V PGI E+L++ +G
Sbjct: 204 RLAKGTGILATIGSVAPFVGLFGTVWGIMNSFINISEAQTTNLAVVAPGIAEALLATAIG 263
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
L +IP+ + YN F + + + ++SR + +
Sbjct: 264 LVAAIPAVVIYNVFARSITGYRALLADASAGVERLVSRDLDFRTA 308
>gi|264679183|ref|YP_003279090.1| MotA/TolQ/ExbB proton channel [Comamonas testosteroni CNB-2]
gi|299533538|ref|ZP_07046914.1| MotA/TolQ/ExbB proton channel [Comamonas testosteroni S44]
gi|262209696|gb|ACY33794.1| MotA/TolQ/ExbB proton channel [Comamonas testosteroni CNB-2]
gi|298718444|gb|EFI59425.1| MotA/TolQ/ExbB proton channel [Comamonas testosteroni S44]
Length = 240
Score = 196 bits (500), Expect = 1e-48, Method: Composition-based stats.
Identities = 47/214 (21%), Positives = 89/214 (41%), Gaps = 4/214 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
I ++ Q K + +L + S+ SW VII K+++ + ++ + + FW L
Sbjct: 5 FGIAHVWTQGDFVTKGVAIILLVMSVASWLVIILKALDIVKFKKFATQAQD-FWHSPDLA 63
Query: 71 TVCKSLKNHHNIGLAAIFMSA--MSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
T + L + + + S + + I D + R + I +
Sbjct: 64 TGLEKLGDDKQNPFRFMVLEGREASAHHRKTSVHLHDTLDISDWVTRCLRNGINEFTARL 123
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLC 187
L+ L S+ S +G+ G V G+ +I +++ + G I E+LI LGL
Sbjct: 124 QSGLAILASVGSTAPFIGLFGTVWGIYHALVAIGMSGQSSIDKVAGPIGEALIMTALGLA 183
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
V+IP+ + YN + +K + FA++ A
Sbjct: 184 VAIPAVLGYNALVRGNKGILNALNSFAHDVHAYF 217
>gi|149927605|ref|ZP_01915858.1| MotA/TolQ/ExbB proton channel [Limnobacter sp. MED105]
gi|149823659|gb|EDM82887.1| MotA/TolQ/ExbB proton channel [Limnobacter sp. MED105]
Length = 239
Score = 196 bits (500), Expect = 2e-48, Method: Composition-based stats.
Identities = 54/223 (24%), Positives = 88/223 (39%), Gaps = 11/223 (4%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YG+A A++ Q +K + LL I SI SW VII +S+ LR+
Sbjct: 4 NPYGIA-------AMWAQGDWVIKSVALLLLIMSIASWYVIITRSIRLYRLRKNV-GAVD 55
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSE--WKKSCDKGARSPIGIQDRIDRMMDV 119
FW S + L + + + + I + D + +
Sbjct: 56 KFWHTHSFAEGLQVLGKDTGNPFHHMAIEGQAAVNHHSTNKDDLHGQISLADWLSEALRG 115
Query: 120 AIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIES 178
A+ E++ LS L S+ S VG+ G V G+ I ++ + G + E+
Sbjct: 116 AMDEAAEKLQSGLSILASVGSTAPFVGLFGTVWGIYHALVGIGVSGQASIDKVAGPVGEA 175
Query: 179 LISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
LI GL V+IP+ + YN +K ++ FA + A
Sbjct: 176 LIMTAFGLAVAIPAVLGYNALTRANKGLLSKLNRFARQLHAYF 218
>gi|163854966|ref|YP_001629264.1| TolQ colicin import protein [Bordetella petrii DSM 12804]
gi|163258694|emb|CAP40993.1| TolQ colicin import protein [Bordetella petrii]
Length = 226
Score = 196 bits (500), Expect = 2e-48, Method: Composition-based stats.
Identities = 70/221 (31%), Positives = 113/221 (51%), Gaps = 4/221 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S+ +L + V+ I+ LL SILSW+ I K + Q R FE FWSG L
Sbjct: 6 DMSLLSLIAHASVPVQLIMLLLLGISILSWTYIFAKRLAIKRAHAQTRRFEDDFWSGGDL 65
Query: 70 ETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIG-IQDRIDRMMDVAIARELE 126
+ +++ + + LA IF + M+E+ K+ I + D R M A RE++
Sbjct: 66 SMLQQAVASRRDEQGALARIFDAGMTEFLKARRTNVNGDINTLLDGPRRAMRAAYQREMD 125
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV-SIPGIIESLISILLG 185
+ L+FL S S +G+LG V G+M F ++ + PGI E+LI+ +G
Sbjct: 126 SLESHLNFLASAGSVSPYIGLLGTVWGIMHAFIGLSNMQQATLASVAPGIAEALIATAIG 185
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
L +IP+ +AYN++ D + +++ + F +EF IL RQ
Sbjct: 186 LFAAIPAVVAYNRYTHDIDRLSIRFDSFVDEFLNILQRQVR 226
>gi|301347557|ref|ZP_07228298.1| biopolymer transport protein [Acinetobacter baumannii AB056]
gi|301513106|ref|ZP_07238343.1| biopolymer transport protein [Acinetobacter baumannii AB058]
gi|301597536|ref|ZP_07242544.1| biopolymer transport protein [Acinetobacter baumannii AB059]
Length = 292
Score = 196 bits (500), Expect = 2e-48, Method: Composition-based stats.
Identities = 54/221 (24%), Positives = 96/221 (43%), Gaps = 11/221 (4%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YGL AL+ + L K + +L + SI +W +II K + ++RQ +E E+
Sbjct: 66 NPYGLE-------ALWREGDLVAKSTLFILVLMSIGTWYIIISKLLQQGKVKRQGKEAEK 118
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
FW SL+ + L+ I ++ KS I + + AI
Sbjct: 119 HFWEATSLDNAAEGLEQSSAYRF--IAEKGINS-TKSHGGSLLERIDFNTWVSISIQRAI 175
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLI 180
+ + L+FL ++ S VG+ G V G+ +I ++ + G + E+LI
Sbjct: 176 EKVQNHLGGGLAFLATVGSTAPFVGLFGTVWGIYHALTAIGISGQASIDKVAGPVGEALI 235
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+GL V++P+ + YN +K + F ++ A+L
Sbjct: 236 MTAIGLAVAVPAVLGYNWLTRRNKAVMENVRSFGSDLHAVL 276
>gi|193077254|gb|ABO12032.2| biopolymer transport protein [Acinetobacter baumannii ATCC 17978]
Length = 292
Score = 196 bits (500), Expect = 2e-48, Method: Composition-based stats.
Identities = 54/221 (24%), Positives = 96/221 (43%), Gaps = 11/221 (4%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YGL AL+ + L K + +L + SI +W +II K + ++RQ +E E+
Sbjct: 66 NPYGLE-------ALWREGDLVAKSTLFILVLMSIGTWYIIISKLLQQGKVKRQGKEAEK 118
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
FW SL+ + L+ I ++ KS I + + AI
Sbjct: 119 HFWEATSLDNAAEGLEQSSAYRF--IAEKGINS-TKSHGGSLLERIDFNTWVSISIQRAI 175
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLI 180
+ + L+FL ++ S VG+ G V G+ +I ++ + G + E+LI
Sbjct: 176 EKVQNHLGGGLAFLATVGSTAPFVGLFGTVWGIYHALTAIGISGQASIDKVAGPVGEALI 235
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+GL V++P+ + YN +K + F ++ A+L
Sbjct: 236 MTAIGLAVAVPAVLGYNWLTRRNKAVMENVRSFGSDLHAVL 276
>gi|23502525|ref|NP_698652.1| biopolymer transport protein ExbB [Brucella suis 1330]
gi|23348523|gb|AAN30567.1| biopolymer transport protein ExbB [Brucella suis 1330]
Length = 292
Score = 196 bits (499), Expect = 2e-48, Method: Composition-based stats.
Identities = 54/225 (24%), Positives = 103/225 (45%), Gaps = 3/225 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
D+S + +FM VK ++ L I S+ +W+V + KS+ RR+ + ++
Sbjct: 58 PHDLSPWGMFMAADWVVKAVMIGLAIASLATWTVWVAKSLELAGARRRANKALKIIGHSA 117
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARS-PIGIQDRIDRMMDVAIARELE 126
+L +L G AA +A E + S AR+ G+++R+ + A+
Sbjct: 118 TLNDAVHALDGAKGPG-AAFVRAAEDEVRLSGPALARAGGEGLKERVASRLSRIEAKAGR 176
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLG 185
+ + L ++ S VG+ G V G+M F +I+ + N+ V PGI E+L++ +G
Sbjct: 177 RLAKGTGILATIGSVAPFVGLFGTVWGIMNSFINISEAQTTNLAVVAPGIAEALLATAIG 236
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
L +IP+ + YN F + + + ++SR + +
Sbjct: 237 LVAAIPAVVIYNVFARSITGYRALLADASASVERLVSRDLDFRTA 281
>gi|158422882|ref|YP_001524174.1| biopolymer transport protein [Azorhizobium caulinodans ORS 571]
gi|158329771|dbj|BAF87256.1| biopolymer transport protein [Azorhizobium caulinodans ORS 571]
Length = 394
Score = 196 bits (499), Expect = 2e-48, Method: Composition-based stats.
Identities = 56/226 (24%), Positives = 102/226 (45%), Gaps = 5/226 (2%)
Query: 6 LAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS 65
L D+S + +FM + VK +++ L + S+++W++ + K + T RQ R
Sbjct: 163 LLPHDLSPWGMFMAADIVVKVVMSGLALASVITWTIWLVKVLELTTANRQVRRALHTLRE 222
Query: 66 GQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
+L ++L A + SA+ E + S A GI++R+ ++ A
Sbjct: 223 SSNLLGSARALPPR-GGASARLIQSALGELEASRALPA---EGIKERVAISLNRIEAAAG 278
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILL 184
++ L ++ S +G+ G V G+M F I+ + N+ V PGI E+L++ +
Sbjct: 279 RRMSLGTGLLATIGSTAPFIGLFGTVWGIMNSFIGISKAQTTNLAVVAPGIAEALLATAI 338
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
GL +IP+ I YN F + + + E LSR + S
Sbjct: 339 GLVAAIPAVIIYNVFARAISNYKASLSDASAEVMRHLSRDLDREAS 384
>gi|293608231|ref|ZP_06690534.1| ExbB protein [Acinetobacter sp. SH024]
gi|292828804|gb|EFF87166.1| ExbB protein [Acinetobacter sp. SH024]
Length = 292
Score = 196 bits (499), Expect = 2e-48, Method: Composition-based stats.
Identities = 54/221 (24%), Positives = 96/221 (43%), Gaps = 11/221 (4%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YGL AL+ + L K + +L + SI +W +II K + ++RQ +E E+
Sbjct: 66 NPYGLE-------ALWREGDLVAKSTLFILVLMSIGTWYIIISKLLQQGKVKRQGKEAEK 118
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
FW SL+ + L+ I ++ KS I + + AI
Sbjct: 119 HFWEATSLDNAAEGLEQSSAYRF--IAEKGINS-TKSHGGSLLERIDFNTWVSISIQRAI 175
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLI 180
+ + L+FL ++ S VG+ G V G+ +I ++ + G + E+LI
Sbjct: 176 EKIQNHLGGGLAFLATVGSTAPFVGLFGTVWGIYHALTAIGISGQASIDKVAGPVGEALI 235
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+GL V++P+ + YN +K + F ++ A+L
Sbjct: 236 MTAIGLAVAVPAVLGYNWLTRRNKAVMENVRSFGSDLHAVL 276
>gi|169633460|ref|YP_001707196.1| putative transporter; MotA/TolQ/ExbB proton channel [Acinetobacter
baumannii SDF]
gi|169152252|emb|CAP01157.1| putative transporter; MotA/TolQ/ExbB proton channel [Acinetobacter
baumannii]
Length = 293
Score = 196 bits (499), Expect = 2e-48, Method: Composition-based stats.
Identities = 54/221 (24%), Positives = 96/221 (43%), Gaps = 11/221 (4%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YGL AL+ + L K + +L + SI +W +II K + ++RQ +E E+
Sbjct: 67 NPYGLE-------ALWREGDLVAKSTLFILVLMSIGTWYIIISKLLQQGKVKRQGKEAEK 119
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
FW SL+ + L+ I ++ KS I + + AI
Sbjct: 120 HFWEATSLDNAAEGLEQSSAYRF--IAEKGINS-TKSHGGSLLERIDFNTWVSISIQRAI 176
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLI 180
+ + L+FL ++ S VG+ G V G+ +I ++ + G + E+LI
Sbjct: 177 EKVQSHLGGGLAFLATVGSTAPFVGLFGTVWGIYHALTAIGISGQASIDKVAGPVGEALI 236
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+GL V++P+ + YN +K + F ++ A+L
Sbjct: 237 MTAIGLAVAVPAVLGYNWLTRRNKAVMENVRSFGSDLHAVL 277
>gi|184157951|ref|YP_001846290.1| biopolymer transport protein [Acinetobacter baumannii ACICU]
gi|183209545|gb|ACC56943.1| Biopolymer transport protein [Acinetobacter baumannii ACICU]
Length = 292
Score = 196 bits (499), Expect = 2e-48, Method: Composition-based stats.
Identities = 54/221 (24%), Positives = 96/221 (43%), Gaps = 11/221 (4%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YGL AL+ + L K + +L + SI +W +II K + ++RQ +E E+
Sbjct: 66 NPYGLE-------ALWREGDLVAKSTLFILVLMSIGTWYIIISKLLQQGKVKRQGKEAEK 118
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
FW SL+ + L+ I ++ KS I + + AI
Sbjct: 119 HFWEATSLDNAAEGLEQSSAYRF--IAEKGINS-TKSHGGSLLERIDFNTWVSISIQRAI 175
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLI 180
+ + L+FL ++ S VG+ G V G+ +I ++ + G + E+LI
Sbjct: 176 EKVQNHLGGGLAFLATVGSTAPFVGLFGTVWGIYHALTAIGISGQASIDKVAGPVGEALI 235
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+GL V++P+ + YN +K + F ++ A+L
Sbjct: 236 MTAIGLAVAVPAVLGYNWLTRRNKAVMENVRSFGSDLHAVL 276
>gi|82700456|ref|YP_415030.1| MotA/TolQ/ExbB proton channel [Brucella melitensis biovar Abortus
2308]
gi|256370079|ref|YP_003107590.1| biopolymer transport protein ExbB [Brucella microti CCM 4915]
gi|82616557|emb|CAJ11635.1| MotA/TolQ/ExbB proton channel [Brucella melitensis biovar Abortus
2308]
gi|256000242|gb|ACU48641.1| biopolymer transport protein ExbB [Brucella microti CCM 4915]
gi|326539386|gb|ADZ87601.1| TonB-system energizer ExbB [Brucella melitensis M5-90]
Length = 292
Score = 196 bits (499), Expect = 2e-48, Method: Composition-based stats.
Identities = 54/225 (24%), Positives = 103/225 (45%), Gaps = 3/225 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
D+S + +FM VK ++ L I S+ +W+V + KS+ RR+ + ++
Sbjct: 58 PHDLSPWGMFMAADWVVKAVMIGLAIASLATWTVWVAKSLELAGARRRANKALKIIGHSA 117
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARS-PIGIQDRIDRMMDVAIARELE 126
+L +L G AA +A E + S AR+ G+++R+ + A+
Sbjct: 118 TLNDAVHALDGAKGPG-AAFVRAAEDEVRLSGPALARAGGEGLKERVASRLSRIEAKAGR 176
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLG 185
+ + L ++ S VG+ G V G+M F +I+ + N+ V PGI E+L++ +G
Sbjct: 177 RLAKGTGILATIGSVAPFVGLFGTVWGIMNSFINISEAQTTNLAVVAPGIAEALLATAIG 236
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
L +IP+ + YN F + + + ++SR + +
Sbjct: 237 LVAAIPAVVIYNVFARSITGYRALLADASAGVERLVSRDLDFRTA 281
>gi|262375664|ref|ZP_06068896.1| TolQ [Acinetobacter lwoffii SH145]
gi|262309267|gb|EEY90398.1| TolQ [Acinetobacter lwoffii SH145]
Length = 293
Score = 196 bits (499), Expect = 2e-48, Method: Composition-based stats.
Identities = 52/224 (23%), Positives = 101/224 (45%), Gaps = 17/224 (7%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YGL A++ + + K + +L I SI +W ++I K + +R+Q +E E
Sbjct: 67 NPYGLE-------AMWKEGDMVSKVTLFILVIMSIGTWYIMISKCLQQSKIRKQAKEAEH 119
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQD---RIDRMMD 118
FW SL+ ++L A+++ + KS + + D + +
Sbjct: 120 QFWESSSLDNATENLDE------ASVYRFIAEKGIKSTKNHGGTLLERIDFNTWVTISIS 173
Query: 119 VAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIE 177
AI + ++ L+FL ++ S VG+ G V G+ +I ++ + G + E
Sbjct: 174 RAIDKIQNHLSGGLAFLATVGSTAPFVGLFGTVWGIYHALTAIGVSGQASIDKVAGPVGE 233
Query: 178 SLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+LI +GL V++P+ + YN +K ++ F ++ A+L
Sbjct: 234 ALIMTAIGLAVAVPAVLGYNWLTRRNKAVMEEVRTFGSDLHAVL 277
>gi|85714503|ref|ZP_01045491.1| exbB, uptake of enterochelin; tonB-dependent uptake of B colicins
[Nitrobacter sp. Nb-311A]
gi|85698950|gb|EAQ36819.1| exbB, uptake of enterochelin; tonB-dependent uptake of B colicins
[Nitrobacter sp. Nb-311A]
Length = 296
Score = 196 bits (499), Expect = 2e-48, Method: Composition-based stats.
Identities = 54/224 (24%), Positives = 103/224 (45%), Gaps = 4/224 (1%)
Query: 3 NYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQL 62
+ +++ +FM VK ++ L + S+++WSV + K++ + R +
Sbjct: 63 PEPILPHELTPIGMFMAADAIVKAVMIGLALASVVTWSVWLAKTIELLGARSRLLRDLHS 122
Query: 63 FWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIA 122
+SL+ K L+ N +A + +A E +S D A + G+++R+ + A
Sbjct: 123 VEDVRSLDEASKILQ-RSNSDIAILTNAARDEIHRSQD--AMNHDGVKERVASLFSRIEA 179
Query: 123 RELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLIS 181
+T S L ++ S VG+ G V G+M F I+ + N+ V PGI E+L++
Sbjct: 180 AAARRMTRGTSILATIGSTAPFVGLFGTVWGIMNAFIGISKTQTTNLAVVAPGIAEALLA 239
Query: 182 ILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+GL +IP+ + YN F + + + E ++SR
Sbjct: 240 TAMGLVAAIPAVMIYNVFSRSITGYRGLLGDGSAELMRMVSRDL 283
>gi|169796121|ref|YP_001713914.1| putative transporter; putative MotA/TolQ/ExbB proton channel
[Acinetobacter baumannii AYE]
gi|213157146|ref|YP_002319191.1| biopolymer transport protein [Acinetobacter baumannii AB0057]
gi|215483575|ref|YP_002325796.1| MotA/TolQ/ExbB proton channel family protein [Acinetobacter
baumannii AB307-0294]
gi|169149048|emb|CAM86925.1| putative transporter; putative MotA/TolQ/ExbB proton channel
[Acinetobacter baumannii AYE]
gi|213056306|gb|ACJ41208.1| biopolymer transport protein [Acinetobacter baumannii AB0057]
gi|213988205|gb|ACJ58504.1| MotA/TolQ/ExbB proton channel family protein [Acinetobacter
baumannii AB307-0294]
Length = 293
Score = 196 bits (499), Expect = 2e-48, Method: Composition-based stats.
Identities = 54/221 (24%), Positives = 96/221 (43%), Gaps = 11/221 (4%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YGL AL+ + L K + +L + SI +W +II K + ++RQ +E E+
Sbjct: 67 NPYGLE-------ALWREGDLVAKSTLFILVLMSIGTWYIIISKLLQQGKVKRQGKEAEK 119
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
FW SL+ + L+ I ++ KS I + + AI
Sbjct: 120 HFWEATSLDNAAEGLEQSSAYRF--IAEKGINS-TKSHGGSLLERIDFNTWVSISIQRAI 176
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLI 180
+ + L+FL ++ S VG+ G V G+ +I ++ + G + E+LI
Sbjct: 177 EKVQNHLGGGLAFLATVGSTAPFVGLFGTVWGIYHALTAIGISGQASIDKVAGPVGEALI 236
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+GL V++P+ + YN +K + F ++ A+L
Sbjct: 237 MTAIGLAVAVPAVLGYNWLTRRNKAVMENVRSFGSDLHAVL 277
>gi|262278935|ref|ZP_06056720.1| biopolymer transporter [Acinetobacter calcoaceticus RUH2202]
gi|262259286|gb|EEY78019.1| biopolymer transporter [Acinetobacter calcoaceticus RUH2202]
Length = 292
Score = 196 bits (498), Expect = 2e-48, Method: Composition-based stats.
Identities = 54/221 (24%), Positives = 96/221 (43%), Gaps = 11/221 (4%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YGL AL+ + L K + +L + SI +W +II K + ++RQ +E E+
Sbjct: 66 NPYGLE-------ALWREGDLVAKSTLFILVLMSIGTWYIIISKFLQQAKVKRQGKEAEK 118
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
FW SL+ +L+ I ++ KS I + + AI
Sbjct: 119 SFWEATSLDNAADTLEQSSAYRF--IAEKGINS-TKSHGGSLLERIDFNTWVSISIQRAI 175
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLI 180
+ + L+FL ++ S VG+ G V G+ +I ++ + G + E+LI
Sbjct: 176 EKIQNHLGGGLAFLATVGSTAPFVGLFGTVWGIYHALTAIGISGQASIDKVAGPVGEALI 235
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+GL V++P+ + YN +K + F ++ A+L
Sbjct: 236 MTAIGLAVAVPAVLGYNWLTRRNKAVMENVRSFGSDLHAVL 276
>gi|265984685|ref|ZP_06097420.1| biopolymer transport channel protein [Brucella sp. 83/13]
gi|264663277|gb|EEZ33538.1| biopolymer transport channel protein [Brucella sp. 83/13]
Length = 319
Score = 196 bits (498), Expect = 2e-48, Method: Composition-based stats.
Identities = 54/225 (24%), Positives = 103/225 (45%), Gaps = 3/225 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
D+S + +FM VK ++ L I S+ +W+V + KS+ RR+ + ++
Sbjct: 85 PHDLSPWGMFMAADWVVKAVMIGLAIASLATWTVWVAKSLELAGARRRANKALKVIGHSA 144
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARS-PIGIQDRIDRMMDVAIARELE 126
+L +L G AA +A E + S AR+ G+++R+ + A+
Sbjct: 145 TLNDAVHALDGAKGPG-AAFVRAAEDEVRLSGPALARAGGEGLKERVASRLSRIEAKAGR 203
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLG 185
+ + L ++ S VG+ G V G+M F +I+ + N+ V PGI E+L++ +G
Sbjct: 204 RLAKGTGILATIGSVAPFVGLFGTVWGIMNSFINISEAQTTNLAVVAPGIAEALLATAIG 263
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
L +IP+ + YN F + + + ++SR + +
Sbjct: 264 LVAAIPAVVIYNVFARSITGYRALLADASAGVERLVSRDLDFRTA 308
>gi|38327066|gb|AAR17605.1| ExbB [Photorhabdus temperata subsp. temperata]
Length = 344
Score = 196 bits (498), Expect = 2e-48, Method: Composition-based stats.
Identities = 46/210 (21%), Positives = 100/210 (47%), Gaps = 2/210 (0%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
D+SI+ ++ + VK ++ L I S+++W++ K V + R+ R+ + +
Sbjct: 119 ATDLSIWGMYKNADIVVKTVMVGLVIASVITWALFFSKGVELLAAGRRLRKEQLALAEVK 178
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
SL+ + + + ++ + +S ++ + + I++R+ ++ ++A
Sbjct: 179 SLDQAAEIAEGFSKLSISRLLLSEAQAERQLSSE-STDLNSIKERVSFRLERSVAAISRH 237
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
+ +L ++ + VG+ G V G+M F IA + N+ V PGI E+L++ LGL
Sbjct: 238 MGRGNGYLATIGAISPFVGLFGTVWGIMNSFIGIAHSQTTNLAVVAPGIAEALLATALGL 297
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANE 216
+IP+ + YN F + Q+ A +
Sbjct: 298 VAAIPAVVIYNIFARMIASYRGQVGDMAAQ 327
>gi|258405708|ref|YP_003198450.1| MotA/TolQ/ExbB proton channel [Desulfohalobium retbaense DSM 5692]
gi|257797935|gb|ACV68872.1| MotA/TolQ/ExbB proton channel [Desulfohalobium retbaense DSM 5692]
Length = 243
Score = 196 bits (498), Expect = 2e-48, Method: Composition-based stats.
Identities = 56/217 (25%), Positives = 108/217 (49%), Gaps = 4/217 (1%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
+ + + + V+ ++ LL S+ SW++I+ K +R+ R+ + F + + L T
Sbjct: 9 FWGMIQEATIVVQFVLALLAAMSVTSWAIILYKIFQLTQAKRKVRQEAEQFANARDLATA 68
Query: 73 CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARS---PIGIQDRIDRMMDVAIARELEEIT 129
+ LK + N L + A+SE + +S D I R++ +++ + +
Sbjct: 69 MQQLKRNQNSALYLVGYEAISELHRLERSSLQSRQKAAVAADNIRRVLRRGVSKRMTQYA 128
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCV 188
+ L+FL + +A +G+ G V G+M FQ+I + + ++ PGI E+L++ +GL V
Sbjct: 129 QNLAFLATCGNAAPFIGLFGTVWGIMHAFQTIGLEQTAALAAVAPGISEALVATAIGLAV 188
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP++IAYN F+ +M FA F R+
Sbjct: 189 AIPATIAYNSFLGVLNAVEAEMVNFAGSFLNRAQREV 225
>gi|37222145|gb|AAP49338.1| ExbB [uncultured bacterium]
Length = 238
Score = 196 bits (498), Expect = 2e-48, Method: Composition-based stats.
Identities = 48/222 (21%), Positives = 89/222 (40%), Gaps = 11/222 (4%)
Query: 3 NYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQL 62
YG+A +++ Q +K + +L I SI SW VI+ ++ LRR +
Sbjct: 4 PYGIA-------SIWQQGDALIKGVAIILLIMSIASWWVIVVRAWGLWRLRRPSQG-LND 55
Query: 63 FWSGQSLETVCKSLKNHHNIGLAAIFMSAMSE--WKKSCDKGARSPIGIQDRIDRMMDVA 120
FW QS ++L + + + + + + + + + +
Sbjct: 56 FWHAQSFAEGLRTLGEDRSTPFRHLAEEGQAALDHHSNHKDDLHGHLPLAEWLTACLRGS 115
Query: 121 IARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESL 179
I E + L+ L S+ S VG+ G V G+ I ++ + G + E+L
Sbjct: 116 IDESAERLQRGLAILASVGSTAPFVGLFGTVWGIYHALVGIGISGQASIDKVAGPVGEAL 175
Query: 180 ISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
I GL V+IP+ + YN +K ++ FA++ A
Sbjct: 176 IMTAFGLAVAIPAVLGYNALTRANKGVLNKLNRFAHQLHAYF 217
>gi|299770380|ref|YP_003732406.1| biopolymer transport protein [Acinetobacter sp. DR1]
gi|298700468|gb|ADI91033.1| biopolymer transport protein [Acinetobacter sp. DR1]
Length = 292
Score = 196 bits (498), Expect = 3e-48, Method: Composition-based stats.
Identities = 54/221 (24%), Positives = 96/221 (43%), Gaps = 11/221 (4%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YGL AL+ + L K + +L + SI +W +II K + ++RQ +E E+
Sbjct: 66 NPYGLE-------ALWREGDLVAKSTLFILVLMSIGTWYIIISKFLQQAKVKRQGKEAEK 118
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
FW SL+ +L+ I ++ KS I + + AI
Sbjct: 119 SFWEATSLDNAADNLEQSSAYRF--IAEKGINS-TKSHGGSLLERIDFNTWVSISIQRAI 175
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLI 180
+ + L+FL ++ S VG+ G V G+ +I ++ + G + E+LI
Sbjct: 176 EKIQNHLGGGLAFLATVGSTAPFVGLFGTVWGIYHALTAIGISGQASIDKVAGPVGEALI 235
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+GL V++P+ + YN +K + F ++ A+L
Sbjct: 236 MTAIGLAVAVPAVLGYNWLTRRNKAVMENVRSFGSDLHAVL 276
>gi|221066179|ref|ZP_03542284.1| MotA/TolQ/ExbB proton channel [Comamonas testosteroni KF-1]
gi|220711202|gb|EED66570.1| MotA/TolQ/ExbB proton channel [Comamonas testosteroni KF-1]
Length = 240
Score = 196 bits (498), Expect = 3e-48, Method: Composition-based stats.
Identities = 46/214 (21%), Positives = 89/214 (41%), Gaps = 4/214 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
I ++ Q K + +L + S+ SW VI+ K+++ + ++ + + FW L
Sbjct: 5 FGIAHVWTQGDFVTKGVAIILLVMSVASWLVIVLKALDIVKFKKFATQAQD-FWHSPDLA 63
Query: 71 TVCKSLKNHHNIGLAAIFMSA--MSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
T + L + + + S + + I D + R + I +
Sbjct: 64 TGLEKLGDDKQNPFRFMVLEGREASAHHRKTSVHLHDTLDISDWVTRCLRNGINEFTARL 123
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLC 187
L+ L S+ S +G+ G V G+ +I +++ + G I E+LI LGL
Sbjct: 124 QSGLAILASVGSTAPFIGLFGTVWGIYHALVAIGMSGQSSIDKVAGPIGEALIMTALGLA 183
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
V+IP+ + YN + +K + FA++ A
Sbjct: 184 VAIPAVLGYNALVRGNKGILNALNSFAHDVHAYF 217
>gi|326316752|ref|YP_004234424.1| MotA/TolQ/ExbB proton channel [Acidovorax avenae subsp. avenae ATCC
19860]
gi|323373588|gb|ADX45857.1| MotA/TolQ/ExbB proton channel [Acidovorax avenae subsp. avenae ATCC
19860]
Length = 238
Score = 196 bits (498), Expect = 3e-48, Method: Composition-based stats.
Identities = 45/214 (21%), Positives = 88/214 (41%), Gaps = 4/214 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
I +++Q + + LL S+ SW VI+ K+++ I ++ R FW +
Sbjct: 5 FGIANVWIQGDFVTRAVAVLLLGMSLASWIVILIKALDIIKFKKHARAARD-FWHSEDFA 63
Query: 71 TVCKSLKNHHNIGLAAIFMSA--MSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ L + + + + + ++ + + D I R + I +
Sbjct: 64 AGMEKLGSDADNPFRHLALEGREATAHHRNTKAHLHDSLDVSDWITRSLRNCIDEFTARL 123
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLC 187
L+ L S+ S +G+ G V G+ +I + + + G I E+LI LGL
Sbjct: 124 QSGLAILASVGSTAPFIGLFGTVWGIYHALVAIGTSGQSTIDKVAGPIGEALIMTALGLA 183
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
V+IP+ + YN + +K + FA++ A
Sbjct: 184 VAIPAVLGYNALVRGNKSILNGLNSFAHDLHAYF 217
>gi|325122037|gb|ADY81560.1| putative biopolymer transport protein ExbB [Acinetobacter
calcoaceticus PHEA-2]
Length = 293
Score = 196 bits (498), Expect = 3e-48, Method: Composition-based stats.
Identities = 54/221 (24%), Positives = 96/221 (43%), Gaps = 11/221 (4%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YGL AL+ + L K + +L + SI +W +II K + ++RQ +E E+
Sbjct: 67 NPYGLE-------ALWREGDLVAKSTLFILVLMSIGTWYIIISKLLQQGKVKRQGKEAEK 119
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
FW SL+ + L+ I ++ KS I + + AI
Sbjct: 120 HFWEATSLDNAAEGLEQSSAYRF--IAEKGINS-TKSHGGSLLERIDFNTWVSISIQRAI 176
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLI 180
+ + L+FL ++ S VG+ G V G+ +I ++ + G + E+LI
Sbjct: 177 EKIQNHLGGGLAFLATVGSTAPFVGLFGTVWGIYHALTAIGISGQASIDKVAGPVGEALI 236
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+GL V++P+ + YN +K + F ++ A+L
Sbjct: 237 MTAIGLAVAVPAVLGYNWLTRRNKAVMENVRSFGSDLHAVL 277
>gi|239502172|ref|ZP_04661482.1| biopolymer transport protein [Acinetobacter baumannii AB900]
Length = 292
Score = 196 bits (498), Expect = 3e-48, Method: Composition-based stats.
Identities = 54/221 (24%), Positives = 96/221 (43%), Gaps = 11/221 (4%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YGL AL+ + L K + +L + SI +W +II K + ++RQ +E E+
Sbjct: 66 NPYGLE-------ALWREGDLVAKSTLFILVLMSIGTWYIIISKLLQQGKVKRQGKEAEK 118
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
FW SL+ + L+ I ++ KS I + + AI
Sbjct: 119 HFWEATSLDNAAEGLEQSSAYRF--IAEKGINS-TKSHGGSLLERIDFNTWVSISIQRAI 175
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLI 180
+ + L+FL ++ S VG+ G V G+ +I ++ + G + E+LI
Sbjct: 176 EKVQNHLGGGLAFLATVGSTAPFVGLFGTVWGIYHALTAIGISGQASIDKVAGPVGEALI 235
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+GL V++P+ + YN +K + F ++ A+L
Sbjct: 236 MTAIGLAVAVPAVLGYNWLTRRNKAVMENVRSFGSDLHAVL 276
>gi|241766457|ref|ZP_04764329.1| MotA/TolQ/ExbB proton channel [Acidovorax delafieldii 2AN]
gi|241363354|gb|EER58874.1| MotA/TolQ/ExbB proton channel [Acidovorax delafieldii 2AN]
Length = 239
Score = 195 bits (497), Expect = 3e-48, Method: Composition-based stats.
Identities = 44/214 (20%), Positives = 86/214 (40%), Gaps = 4/214 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
I +++Q + + LL S+ SW VI+ K+++ + ++ R + FW +
Sbjct: 5 FGIANVWIQGDFVTRAVAILLLGMSLASWIVILIKALDIVKFKKHARAAQD-FWHSEDFA 63
Query: 71 TVCKSLKNHHNIGLAAIFMSA--MSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
L + + + ++ + + D + R + I I
Sbjct: 64 AGLTKLGADPTNPFRHLALEGREATAHHRNTKAHLHDSLDVSDWVTRCLRNCIDEFTARI 123
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLC 187
L+ L S+ S +G+ G V G+ +I + + + G I E+LI LGL
Sbjct: 124 QSGLAILASVGSTAPFIGLFGTVWGIYHALLAIGTSGQSTIDKVAGPIGEALIMTALGLA 183
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
V+IP+ + YN + +K + FA++ A
Sbjct: 184 VAIPAVLGYNALVRGNKSILNGLNSFAHDLHAYF 217
>gi|261750827|ref|ZP_05994536.1| biopolymer transporter ExbB [Brucella suis bv. 5 str. 513]
gi|261740580|gb|EEY28506.1| biopolymer transporter ExbB [Brucella suis bv. 5 str. 513]
Length = 319
Score = 195 bits (497), Expect = 3e-48, Method: Composition-based stats.
Identities = 54/225 (24%), Positives = 102/225 (45%), Gaps = 3/225 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
D+S + +FM VK ++ L I S+ +W+V + KS+ RR+ + ++
Sbjct: 85 PHDLSPWGMFMAADWVVKAVMIGLAIASLATWTVWVAKSLELAGARRRANKALKIIGHSA 144
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARS-PIGIQDRIDRMMDVAIARELE 126
+L +L G AA +A E + S AR+ G ++R+ + A+
Sbjct: 145 TLNDAVHALDGAKGPG-AAFVRAAEDEVRLSGPALARAGGEGFKERVASRLSRIEAKAGR 203
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLG 185
+ + L ++ S VG+ G V G+M F +I+ + N+ V PGI E+L++ +G
Sbjct: 204 RLAKGTGILATIGSVAPFVGLFGTVWGIMNSFINISEAQTTNLAVVAPGIAEALLATAIG 263
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
L +IP+ + YN F + + + ++SR + +
Sbjct: 264 LVAAIPAVVIYNVFARSITGYRALLADASAGVERLVSRDLDFRTA 308
>gi|260555170|ref|ZP_05827391.1| TolQ [Acinetobacter baumannii ATCC 19606]
gi|260411712|gb|EEX05009.1| TolQ [Acinetobacter baumannii ATCC 19606]
gi|322508270|gb|ADX03724.1| MotA/TolQ/ExbB proton channel [Acinetobacter baumannii 1656-2]
gi|323517896|gb|ADX92277.1| biopolymer transport protein [Acinetobacter baumannii TCDC-AB0715]
Length = 293
Score = 195 bits (497), Expect = 3e-48, Method: Composition-based stats.
Identities = 54/221 (24%), Positives = 96/221 (43%), Gaps = 11/221 (4%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YGL AL+ + L K + +L + SI +W +II K + ++RQ +E E+
Sbjct: 67 NPYGLE-------ALWREGDLVAKSTLFILVLMSIGTWYIIISKLLQQGKVKRQGKEAEK 119
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
FW SL+ + L+ I ++ KS I + + AI
Sbjct: 120 HFWEATSLDNAAEGLEQSSAYRF--IAEKGINS-TKSHGGSLLERIDFNTWVSISIQRAI 176
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLI 180
+ + L+FL ++ S VG+ G V G+ +I ++ + G + E+LI
Sbjct: 177 EKVQNHLGGGLAFLATVGSTAPFVGLFGTVWGIYHALTAIGISGQASIDKVAGPVGEALI 236
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+GL V++P+ + YN +K + F ++ A+L
Sbjct: 237 MTAIGLAVAVPAVLGYNWLTRRNKAVMENVRSFGSDLHAVL 277
>gi|83716181|ref|YP_440218.1| MotA/TolQ/ExbB proton channel family protein [Burkholderia
thailandensis E264]
gi|83650006|gb|ABC34070.1| MotA/TolQ/ExbB proton channel family protein [Burkholderia
thailandensis E264]
Length = 233
Score = 195 bits (497), Expect = 3e-48, Method: Composition-based stats.
Identities = 51/212 (24%), Positives = 88/212 (41%), Gaps = 6/212 (2%)
Query: 16 LFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKS 75
++ Q + I L + SILSW VI+ K N I L+R ++ EQ FW + K
Sbjct: 1 MWAQGDFVTRSIAIALLVMSILSWMVIVIKGWNVIRLKRLSKDAEQSFWHSDDFDEGVKK 60
Query: 76 LK---NHHNIGLAAIFMSA--MSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
L + + A+ +S ++ + + D + R + + + +
Sbjct: 61 LGLASSSQDNPFLALALSGKEAADHHHQTQPHLHDRMDVSDWVTRCLKDTMDEGIARMQG 120
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVS 189
L+ L S+ S VG+ G V G+ I ++ + G + ESLI GL V+
Sbjct: 121 GLAILASIGSTAPFVGLFGTVWGIYHALLVIGATGQTSIDQVAGPVGESLIMTAFGLFVA 180
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
IP+ + YN +K ++ FA+ A
Sbjct: 181 IPAVLGYNALTRANKSVVSRLRRFAHGLHAYF 212
>gi|167626690|ref|YP_001677190.1| group A colicin translocation protein TolQ [Francisella
philomiragia subsp. philomiragia ATCC 25017]
gi|241667265|ref|ZP_04754843.1| group A colicin translocation; TolQ protein [Francisella
philomiragia subsp. philomiragia ATCC 25015]
gi|167596691|gb|ABZ86689.1| group A colicin translocation; TolQ protein [Francisella
philomiragia subsp. philomiragia ATCC 25017]
Length = 235
Score = 195 bits (497), Expect = 3e-48, Method: Composition-based stats.
Identities = 56/221 (25%), Positives = 108/221 (48%), Gaps = 3/221 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
IS+ L + V+ I+ L S+ SW+++ + + R + +F++LFW+G ++
Sbjct: 5 ISLIQLILHANFIVQLIMLGLVAMSVYSWAIMFEVNNRVKKYRNEQVQFDKLFWAGHHIQ 64
Query: 71 TVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ H G + IF S + E+ D G I + ++R + +AIA+E +E+
Sbjct: 65 KLYDYYLQHKENIFGKSIIFCSGLREFNNLKDTGILRGDTILEGMERTVSIAIAQEAKEL 124
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
KL L ++ + +G++G V G+M F ++ G + V P I E+LI+ LGL
Sbjct: 125 DRKLPALATIGAVSPYIGLVGTVWGIMSSFNTLGGVEQATISVVAPHIAEALIATALGLF 184
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
V+IP+ I +++ E F ++ +L ++ +
Sbjct: 185 VAIPAVIGHSRLSNQVDDVLSGYESFQDDLCILLLKEAHRD 225
>gi|260550124|ref|ZP_05824338.1| biopolymer transporter [Acinetobacter sp. RUH2624]
gi|260406879|gb|EEX00358.1| biopolymer transporter [Acinetobacter sp. RUH2624]
Length = 292
Score = 195 bits (497), Expect = 3e-48, Method: Composition-based stats.
Identities = 53/221 (23%), Positives = 95/221 (42%), Gaps = 11/221 (4%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YGL AL+ + L K + +L + SI +W +I+ K + ++RQ +E E+
Sbjct: 66 NPYGLE-------ALWREGDLVAKSTLFILVLMSIGTWYIIVSKFLQQAKVKRQGKEAEK 118
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
FW SL+ L+ I ++ KS I + + AI
Sbjct: 119 SFWEATSLDNATDGLEQSSAYRF--IAEKGINS-TKSHGGSLLERIDFNTWVSISIQRAI 175
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLI 180
+ + L+FL ++ S VG+ G V G+ +I ++ + G + E+LI
Sbjct: 176 EKVQNHLGGGLAFLATVGSTAPFVGLFGTVWGIYHALTAIGISGQASIDKVAGPVGEALI 235
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+GL V++P+ + YN +K + F ++ A+L
Sbjct: 236 MTAIGLAVAVPAVLGYNWLTRRNKAVMENVRSFGSDLHAVL 276
>gi|212709139|ref|ZP_03317267.1| hypothetical protein PROVALCAL_00172 [Providencia alcalifaciens DSM
30120]
gi|212688051|gb|EEB47579.1| hypothetical protein PROVALCAL_00172 [Providencia alcalifaciens DSM
30120]
Length = 254
Score = 195 bits (497), Expect = 3e-48, Method: Composition-based stats.
Identities = 45/219 (20%), Positives = 104/219 (47%), Gaps = 2/219 (0%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
D+S++ ++ + VK ++ L + S+++W++ + K + RR+ ++ + +S
Sbjct: 30 QDLSVWGMYQNADVVVKTVMIGLLLASVITWALFLSKGSEILVARRRLKDEAKAIAEVKS 89
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
L+ + + ++ + +++ ++ GI+DR ++ ++A +
Sbjct: 90 LDEAVSIADGFKANSITRMLLAEAT-TERALSASSQDLSGIKDRTAFRLERSVAAISRYM 148
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
+L ++ + VG+ G V G+M F IA + N+ V PGI E+L++ +GL
Sbjct: 149 GRGNGYLATIGAISPFVGLFGTVWGIMNSFIGIAHSQTTNLAVVAPGIAEALLATAIGLI 208
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ + YN F + Q+ A + + +L R +
Sbjct: 209 AAIPAVVIYNIFARMINNYRGQVGDVAAQAALLLGRDLD 247
>gi|323698028|ref|ZP_08109940.1| protein TolQ [Desulfovibrio sp. ND132]
gi|323699567|ref|ZP_08111479.1| protein TolQ [Desulfovibrio sp. ND132]
gi|323457960|gb|EGB13825.1| protein TolQ [Desulfovibrio desulfuricans ND132]
gi|323459499|gb|EGB15364.1| protein TolQ [Desulfovibrio desulfuricans ND132]
Length = 233
Score = 195 bits (497), Expect = 3e-48, Method: Composition-based stats.
Identities = 65/222 (29%), Positives = 109/222 (49%), Gaps = 5/222 (2%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
+ D SI L LAVK ++ L S+ SW++I K T R++ + + F +
Sbjct: 4 LPDNSILTLLSGATLAVKLVMLFLGCMSLWSWTIIFLKFFTIGTARKKVIQGYEAFVAAG 63
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGA---RSPIGIQDRIDRMMDVAIARE 124
L KSL + LA + A+ E++ G R + ++D + R++ I++E
Sbjct: 64 DLAKGIKSLGDQE-SPLARVASLAIKEFRLLEKAGVNRERKRLLVKDTLRRVLKQGISKE 122
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISIL 183
+ +T L FL + ++A +G+ G V G+M F SI S + ++ PGI E+LI+
Sbjct: 123 MRSLTRNLPFLATCANAAPFIGLFGTVWGIMHSFHSIGMAQSAALATVAPGISEALIATA 182
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+GL V+IP++I YN F+ + M FA F R+
Sbjct: 183 IGLLVAIPATIFYNYFLGKLNEVESGMVDFAGAFLNRAEREI 224
>gi|300310552|ref|YP_003774644.1| MotA/TolQ/ExbB proton channel family protein [Herbaspirillum
seropedicae SmR1]
gi|300073337|gb|ADJ62736.1| MotA/TolQ/ExbB proton channel family protein [Herbaspirillum
seropedicae SmR1]
Length = 234
Score = 195 bits (496), Expect = 4e-48, Method: Composition-based stats.
Identities = 74/231 (32%), Positives = 117/231 (50%), Gaps = 12/231 (5%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
D+S +L + V+ ++ LL SI+SW+ I +K R Q EFE++FWSG
Sbjct: 4 TQDLSFISLIANASVLVQLVMLLLLSASIISWTYIFRKMFTIRAARVQTEEFERVFWSGG 63
Query: 68 SLETVCKSLKNHHN------IGLAAIFMSAMSEWKK-----SCDKGARSPIGIQDRIDRM 116
+L + + ++ L IF + M E+ K + GA P + D R
Sbjct: 64 NLSALYQDALSNRRKAGGAGGALERIFQAGMGEFTKAKASVAARGGAVDPSLLLDGARRA 123
Query: 117 MDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGI 175
M A RE++ + L+FL S+ S VG+ G V G+M F+ +A + ++ PGI
Sbjct: 124 MRAAYQREMDALESHLAFLASVGSVSPYVGLFGTVWGIMNAFRGLANVQQATLAAVAPGI 183
Query: 176 IESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
E+LI+ +GL +IP+ +AYN++ D + A++ E F EFS IL RQ
Sbjct: 184 AEALIATAIGLFAAIPAVVAYNRYSHDIDRLAIRFESFIEEFSNILQRQAR 234
>gi|251791319|ref|YP_003006040.1| tonB-system energizer ExbB [Dickeya zeae Ech1591]
gi|247539940|gb|ACT08561.1| tonB-system energizer ExbB [Dickeya zeae Ech1591]
Length = 296
Score = 195 bits (496), Expect = 4e-48, Method: Composition-based stats.
Identities = 43/222 (19%), Positives = 102/222 (45%), Gaps = 2/222 (0%)
Query: 6 LAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS 65
L D+S++ ++ + VK ++ L + S+++W++ KS + ++ +++ R Q
Sbjct: 57 LMNTDLSVWGMYQHADVVVKTVMIGLLLASVVTWAIFFGKSASLMSAKKRIRREYQALEE 116
Query: 66 GQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
++L+ ++ ++ + ++ + GI++R + +A
Sbjct: 117 ARTLDDATDIAAEFKPGSVSLQLLTDARNEQVLSER-SDDNNGIKERTAFRFERRVAATG 175
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILL 184
++ +L ++ + +G+ G V G+M F IA + N+ V PGI E+L++ +
Sbjct: 176 RQMGRGTGYLATVGAIAPFIGLFGTVWGIMNSFIGIAQSQTTNLAVVAPGIAEALLATAI 235
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
GL +IP+ + YN F + + + A + + SR +
Sbjct: 236 GLVAAIPAVVIYNVFARWTASYKAIVGDVAAQVLLLQSRDLD 277
>gi|322831377|ref|YP_004211404.1| tonB-system energizer ExbB [Rahnella sp. Y9602]
gi|321166578|gb|ADW72277.1| tonB-system energizer ExbB [Rahnella sp. Y9602]
Length = 313
Score = 195 bits (496), Expect = 4e-48, Method: Composition-based stats.
Identities = 49/225 (21%), Positives = 102/225 (45%), Gaps = 4/225 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
D+S+ ++ + VK ++ L + S+++W+++ K T +R+ R S +
Sbjct: 76 PTDLSVMGMYHHADVVVKTVMIGLLLASVVTWALLFSKGAEVFTGKRRMRREFDALSSVR 135
Query: 68 SLETVCKSLKNHHNIGL-AAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
+L+ + ++ + A + A +E + S G+ GI++R ++ ++
Sbjct: 136 TLDEAAEQAESFAASSISAQMIRDAQNELELSA--GSTDNNGIKERTGFRLERRVSAAGR 193
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLG 185
+ L ++ + VG+ G V G+M F IA + N+ V PGI E+L++ +G
Sbjct: 194 YMGRGNGILATIGAISPFVGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGIAEALLATAVG 253
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
L +IP+ + YN F + Q+ A + + R + S
Sbjct: 254 LVAAIPAVVIYNIFARTITSYRHQVGDVAAQIILLQGRDLDLAAS 298
>gi|148244815|ref|YP_001219509.1| biopolymer transport protein TolQ [Candidatus Vesicomyosocius
okutanii HA]
gi|146326642|dbj|BAF61785.1| biopolymer transport protein TolQ [Candidatus Vesicomyosocius
okutanii HA]
Length = 230
Score = 195 bits (496), Expect = 4e-48, Method: Composition-based stats.
Identities = 57/217 (26%), Positives = 106/217 (48%), Gaps = 3/217 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+SIF+L + G V+ ++ +L + SI SW++I+ K I + + F Q F + LE
Sbjct: 5 LSIFSLILSAGFVVQVVMFILVLMSIYSWTLILSKKKILIDTNKSIKFFYQKFSTNVDLE 64
Query: 71 TV-CKSLKNHHN-IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ ++ + N + IF + E + ++ I +R R+M++ E++ +
Sbjct: 65 KLAYQTFQESTNQSSMERIFNAGYQELNYTTSDSSQELIINAERAYRIMNITANNEVDYL 124
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
+ LS L ++S+ +G+ G V G+M F +A + + PGI E+LI+ GL
Sbjct: 125 DDGLSILAMIASSSPYIGLFGTVWGIMHSFIGLASVKQATIAIVAPGIAEALIATAFGLF 184
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+IP++IAYN+ I + F + + RQ
Sbjct: 185 SAIPATIAYNRLITKVGMINNKYSVFVEQLFVLFQRQ 221
>gi|161619600|ref|YP_001593487.1| tonB-system energizer ExbB [Brucella canis ATCC 23365]
gi|254703450|ref|ZP_05165278.1| tonB-system energizer ExbB [Brucella suis bv. 3 str. 686]
gi|161336411|gb|ABX62716.1| tonB-system energizer ExbB [Brucella canis ATCC 23365]
Length = 307
Score = 195 bits (496), Expect = 4e-48, Method: Composition-based stats.
Identities = 54/225 (24%), Positives = 103/225 (45%), Gaps = 3/225 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
D+S + +FM VK ++ L I S+ +W+V + KS+ RR+ + ++
Sbjct: 73 PHDLSPWGMFMAADWVVKAVMIGLAIASLATWTVWVAKSLELAGARRRANKALKIIGHSA 132
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARS-PIGIQDRIDRMMDVAIARELE 126
+L +L G AA +A E + S AR+ G+++R+ + A+
Sbjct: 133 TLNDAVHALDGAKGPG-AAFVRAAEDEVRLSGPALARAGGEGLKERVASRLSRIEAKAGR 191
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLG 185
+ + L ++ S VG+ G V G+M F +I+ + N+ V PGI E+L++ +G
Sbjct: 192 RLAKGTGILATIGSVAPFVGLFGTVWGIMNSFINISEAQTTNLAVVAPGIAEALLATAIG 251
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
L +IP+ + YN F + + + ++SR + +
Sbjct: 252 LVAAIPAVVIYNVFARSITGYRALLADASASVERLVSRDLDFRTA 296
>gi|312115235|ref|YP_004012831.1| tonB-system energizer ExbB [Rhodomicrobium vannielii ATCC 17100]
gi|311220364|gb|ADP71732.1| tonB-system energizer ExbB [Rhodomicrobium vannielii ATCC 17100]
Length = 311
Score = 195 bits (496), Expect = 4e-48, Method: Composition-based stats.
Identities = 51/222 (22%), Positives = 97/222 (43%), Gaps = 2/222 (0%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
++S +F + VK ++ L + S L+W+V K+ RR + S
Sbjct: 79 PHELSPLGMFHAADVVVKTVMIALMLASFLTWTVFFAKTAELWAARRGLKAAIMSIDSAP 138
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
SL+ +++ G A+ A+ E ++S G G+++R+ + A AR
Sbjct: 139 SLDAAAEAVAQTKGPGAVAV-AEAVREVQRSRTLGNPDKDGVKERVASRLSRAEARASRH 197
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
+ + + ++ S VG+ G V G+M F I+ + N+ V PGI E+L++ LGL
Sbjct: 198 VMVGIGIVATIGSVAPFVGLFGTVWGIMNAFIGISKAQTTNLAVVAPGIAEALLATALGL 257
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
+IP+ + YN F + + + ++S +
Sbjct: 258 VAAIPAVVVYNAFARQITDYRQLLADASAAVERLVSFDLDAR 299
>gi|217977011|ref|YP_002361158.1| tonB-system energizer ExbB [Methylocella silvestris BL2]
gi|217502387|gb|ACK49796.1| tonB-system energizer ExbB [Methylocella silvestris BL2]
Length = 348
Score = 195 bits (496), Expect = 5e-48, Method: Composition-based stats.
Identities = 51/218 (23%), Positives = 101/218 (46%), Gaps = 5/218 (2%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S + +F+ VK ++ L S+++W++ + KS++ R R + + L
Sbjct: 114 DLSPWGMFLHADRIVKGVMIGLAFASLVTWTIWLVKSLDLWRARASARRDLEAVTEAEDL 173
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+ K+ +A +A SE +S A G+++RI ++ + ++
Sbjct: 174 RAAQTTFKDQR-SPVARFVEAARSEEDRSRGLPA---EGVKERIAALLVRLESHAGRKMA 229
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCV 188
S + ++ + VG+ G V G+M F I+ ++ N+ V PGI E+L++ +GL
Sbjct: 230 RGTSVVATIGATAPFVGLFGTVWGIMDSFIGISKSHTTNLAVVAPGIAEALLATAMGLIA 289
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ + YN F + Q+ A E +SR +
Sbjct: 290 AIPAVMIYNVFARGITGYKAQLGDAAAEVLRHVSRDLD 327
>gi|329907985|ref|ZP_08274763.1| MotA/TolQ/ExbB proton channel family protein [Oxalobacteraceae
bacterium IMCC9480]
gi|327546839|gb|EGF31765.1| MotA/TolQ/ExbB proton channel family protein [Oxalobacteraceae
bacterium IMCC9480]
Length = 233
Score = 195 bits (496), Expect = 5e-48, Method: Composition-based stats.
Identities = 69/230 (30%), Positives = 114/230 (49%), Gaps = 11/230 (4%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
D+S +L + V+ ++ LL S++SW+ I +K+ + + Q EFE+ FW+G
Sbjct: 4 TQDLSFISLIANASILVQLVLALLLTVSVMSWTYIFRKAFSIKNAQAQTEEFERAFWAGG 63
Query: 68 SLETVCKSLKNHHN------IGLAAIFMSAMSEWKK----SCDKGARSPIGIQDRIDRMM 117
L T+ + ++ IF + MSE+ K ++ + D R M
Sbjct: 64 DLNTLYQDAASNRRRSEGATGAQERIFAAGMSEFNKGKASLSNRNPGDASQLIDGARRAM 123
Query: 118 DVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGII 176
A RE++ + LSFL S+ S VG+ G V G+M F+ +A + PGI
Sbjct: 124 RAAYQREMDALESHLSFLASVGSVSPYVGLFGTVWGIMNAFRGLANVQQATLSAVAPGIA 183
Query: 177 ESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
E+L++ +GL +IP+ +AYN+F D + +++ E F EFS IL RQ
Sbjct: 184 EALVATAIGLFAAIPAVVAYNRFSHDVDRLSIRFESFVEEFSNILQRQAR 233
>gi|163845249|ref|YP_001622904.1| hypothetical protein BSUIS_B1144 [Brucella suis ATCC 23445]
gi|163675972|gb|ABY40082.1| Hypothetical protein, conserved [Brucella suis ATCC 23445]
Length = 307
Score = 195 bits (496), Expect = 5e-48, Method: Composition-based stats.
Identities = 54/225 (24%), Positives = 103/225 (45%), Gaps = 3/225 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
D+S + +FM VK ++ L I S+ +W+V + KS+ RR+ + ++
Sbjct: 73 PHDLSPWGMFMAADWVVKAVMIGLAIASLATWTVWVAKSLELAGARRRANKALKIIGHSA 132
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARS-PIGIQDRIDRMMDVAIARELE 126
+L +L G AA +A E + S AR+ G+++R+ + A+
Sbjct: 133 TLNDAVHALDGAKGPG-AAFVRAAEDEVRLSGPALARAGGEGLKERVASHLSRIEAKAGR 191
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLG 185
+ + L ++ S VG+ G V G+M F +I+ + N+ V PGI E+L++ +G
Sbjct: 192 RLAKGTGILATIGSVAPFVGLFGTVWGIMNSFINISEAQTTNLAVVAPGIAEALLATAIG 251
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
L +IP+ + YN F + + + ++SR + +
Sbjct: 252 LVAAIPAVVIYNVFARSITGYRALLADASASVERLVSRDLDFRTA 296
>gi|62290541|ref|YP_222334.1| biopolymer transport protein ExbB [Brucella abortus bv. 1 str.
9-941]
gi|189024761|ref|YP_001935529.1| MotA/TolQ/ExbB proton channel [Brucella abortus S19]
gi|225853130|ref|YP_002733363.1| TonB-system energizer ExbB [Brucella melitensis ATCC 23457]
gi|254689838|ref|ZP_05153092.1| tonB-system energizer ExbB [Brucella abortus bv. 6 str. 870]
gi|254697986|ref|ZP_05159814.1| tonB-system energizer ExbB [Brucella abortus bv. 2 str. 86/8/59]
gi|254708464|ref|ZP_05170292.1| tonB-system energizer ExbB [Brucella pinnipedialis M163/99/10]
gi|254708684|ref|ZP_05170495.1| tonB-system energizer ExbB [Brucella pinnipedialis B2/94]
gi|254714531|ref|ZP_05176342.1| tonB-system energizer ExbB [Brucella ceti M644/93/1]
gi|254717429|ref|ZP_05179240.1| tonB-system energizer ExbB [Brucella ceti M13/05/1]
gi|254730872|ref|ZP_05189450.1| tonB-system energizer ExbB [Brucella abortus bv. 4 str. 292]
gi|256030210|ref|ZP_05443824.1| tonB-system energizer ExbB [Brucella pinnipedialis M292/94/1]
gi|256045279|ref|ZP_05448173.1| tonB-system energizer ExbB [Brucella melitensis bv. 1 str. Rev.1]
gi|256061708|ref|ZP_05451845.1| tonB-system energizer ExbB [Brucella neotomae 5K33]
gi|256114238|ref|ZP_05454983.1| tonB-system energizer ExbB [Brucella melitensis bv. 3 str. Ether]
gi|256160384|ref|ZP_05458074.1| tonB-system energizer ExbB [Brucella ceti M490/95/1]
gi|256255592|ref|ZP_05461128.1| tonB-system energizer ExbB [Brucella ceti B1/94]
gi|256258091|ref|ZP_05463627.1| tonB-system energizer ExbB [Brucella abortus bv. 9 str. C68]
gi|260167886|ref|ZP_05754697.1| tonB-system energizer ExbB [Brucella sp. F5/99]
gi|294850922|ref|ZP_06791598.1| biopolymer transporter ExbB [Brucella sp. NVSL 07-0026]
gi|62196673|gb|AAX74973.1| ExbB, biopolymer transport protein ExbB [Brucella abortus bv. 1
str. 9-941]
gi|189020333|gb|ACD73055.1| MotA/TolQ/ExbB proton channel [Brucella abortus S19]
gi|225641495|gb|ACO01409.1| tonB-system energizer ExbB [Brucella melitensis ATCC 23457]
gi|294821565|gb|EFG38561.1| biopolymer transporter ExbB [Brucella sp. NVSL 07-0026]
gi|326409679|gb|ADZ66744.1| MotA/TolQ/ExbB proton channel [Brucella melitensis M28]
Length = 307
Score = 195 bits (496), Expect = 5e-48, Method: Composition-based stats.
Identities = 54/225 (24%), Positives = 103/225 (45%), Gaps = 3/225 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
D+S + +FM VK ++ L I S+ +W+V + KS+ RR+ + ++
Sbjct: 73 PHDLSPWGMFMAADWVVKAVMIGLAIASLATWTVWVAKSLELAGARRRANKALKIIGHSA 132
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARS-PIGIQDRIDRMMDVAIARELE 126
+L +L G AA +A E + S AR+ G+++R+ + A+
Sbjct: 133 TLNDAVHALDGAKGPG-AAFVRAAEDEVRLSGPALARAGGEGLKERVASRLSRIEAKAGR 191
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLG 185
+ + L ++ S VG+ G V G+M F +I+ + N+ V PGI E+L++ +G
Sbjct: 192 RLAKGTGILATIGSVAPFVGLFGTVWGIMNSFINISEAQTTNLAVVAPGIAEALLATAIG 251
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
L +IP+ + YN F + + + ++SR + +
Sbjct: 252 LVAAIPAVVIYNVFARSITGYRALLADASAGVERLVSRDLDFRTA 296
>gi|226953479|ref|ZP_03823943.1| transporter; MotA/TolQ/ExbB proton channel [Acinetobacter sp. ATCC
27244]
gi|226835764|gb|EEH68147.1| transporter; MotA/TolQ/ExbB proton channel [Acinetobacter sp. ATCC
27244]
Length = 291
Score = 195 bits (495), Expect = 5e-48, Method: Composition-based stats.
Identities = 52/221 (23%), Positives = 91/221 (41%), Gaps = 11/221 (4%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YGL AL+ + + K + +L + SI +W +I K ++R E E+
Sbjct: 66 NPYGLE-------ALWREGDVIAKTTLFILVLMSIGTWYIIFSKVFQQSKVKRHGIEAER 118
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
FW +L + SL N I + K D I + + AI
Sbjct: 119 NFWEADTLNSAKDSLA--PNSSYRYIAEKGIHS-TKHHDGTLLERIDFNTWVTISIQRAI 175
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLI 180
+ + L+FL ++ S VG+ G V G+ +I ++ + G + E+LI
Sbjct: 176 EKVQSHLGNGLAFLATVGSTAPFVGLFGTVWGIYHALTAIGISGQASIDKVAGPVGEALI 235
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+GL V++P+ + YN +K + F ++ A+L
Sbjct: 236 MTAIGLAVAVPAVLGYNWLTRRNKAVMDNVRSFGSDLHAVL 276
>gi|285019186|ref|YP_003376897.1| biopolymer transport tolq transmembrane protein [Xanthomonas
albilineans GPE PC73]
gi|283474404|emb|CBA16905.1| probable biopolymer transport tolq transmembrane protein
[Xanthomonas albilineans]
Length = 258
Score = 195 bits (495), Expect = 5e-48, Method: Composition-based stats.
Identities = 60/194 (30%), Positives = 97/194 (50%), Gaps = 4/194 (2%)
Query: 39 WSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNI--GLAAIFMSAMSEWK 96
W +I +K F R+ FE FWSG L + + + + GL AIF + E+
Sbjct: 65 WVIIFRKGRVFKQANREADAFENRFWSGADLSKLYAGATDRNRVVGGLEAIFEAGFREFA 124
Query: 97 KSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMG 156
+ DK + R M ARE++ + L L +++S VG++G V G+M
Sbjct: 125 RLRDKRHLDARIQLEGAQRAMRATYAREVDRLERNLELLANIASNAPYVGLVGTVFGIMV 184
Query: 157 FFQSI--AGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFA 214
+ +G + PGI E+L + +GL V+IP++ AYN+F ++ A++ E F+
Sbjct: 185 TMHDMINSGQQAGIAAVAPGISEALFATAIGLFVAIPAAWAYNRFSTRVERLAVRFETFS 244
Query: 215 NEFSAILSRQTEGN 228
EFS+IL RQ G+
Sbjct: 245 EEFSSILQRQASGD 258
>gi|192362375|ref|YP_001981791.1| ExbB [Cellvibrio japonicus Ueda107]
gi|190688540|gb|ACE86218.1| ExbB [Cellvibrio japonicus Ueda107]
Length = 239
Score = 195 bits (495), Expect = 5e-48, Method: Composition-based stats.
Identities = 50/222 (22%), Positives = 90/222 (40%), Gaps = 11/222 (4%)
Query: 3 NYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQL 62
YGLA +L+ Q L +K + +L I SI SW VI+ ++ LR+ +
Sbjct: 4 PYGLA-------SLWAQGDLLIKGVAIMLLIMSIASWWVIVVRAWGLWRLRKSSQG-LND 55
Query: 63 FWSGQSLETVCKSLKNHHNIGLAAIFMSAMSE--WKKSCDKGARSPIGIQDRIDRMMDVA 120
FW QS ++L + + + + + + D + + +
Sbjct: 56 FWHAQSFAEGLRTLGEDRHSPFRHLAEEGQAALDHHTNHKTDLHGHLPLADWLTACLRGS 115
Query: 121 IARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESL 179
I E + L+ L S+ S +G+ G V G+ I ++ + G + E+L
Sbjct: 116 IDESAERLQRGLAILASVGSTSPFIGLFGTVWGIYHALVGIGVSGQASIDKVAGPVGEAL 175
Query: 180 ISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
I GL V+IP+ + YN +K ++ FA++ A
Sbjct: 176 IMTAFGLAVAIPAVLGYNALTRANKGVLNKLHRFAHQLHAYF 217
>gi|160900055|ref|YP_001565637.1| MotA/TolQ/ExbB proton channel [Delftia acidovorans SPH-1]
gi|160365639|gb|ABX37252.1| MotA/TolQ/ExbB proton channel [Delftia acidovorans SPH-1]
Length = 240
Score = 195 bits (495), Expect = 6e-48, Method: Composition-based stats.
Identities = 45/214 (21%), Positives = 90/214 (42%), Gaps = 4/214 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
I ++ Q + + +L S+ SW V+I K+++ + ++ R + FW L
Sbjct: 5 FGIAHVWTQGDFVTRAVAIILLAMSVASWLVMIIKALDIVKFKKLARNAQD-FWHSPDLA 63
Query: 71 TVCKSLKNHHNIGLAAIFMSA--MSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ + L + + + + + + + I D + R M I+ +
Sbjct: 64 SGLEKLGDDRSNPFRYLVLEGREATAHHRKTSAHLHDTLDISDWVTRCMRNGISEFTARL 123
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLC 187
L+ L S+ S +G+ G V G+ +I +++ + G I E+LI LGL
Sbjct: 124 QSGLAILASVGSTAPFIGLFGTVWGIYHALVAIGLSGQSSIDKVAGPIGEALIMTALGLA 183
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
V+IP+ + YN + +K + FA++ A
Sbjct: 184 VAIPAVLGYNAVVRGNKSILNALNSFAHDMHAYF 217
>gi|148559259|ref|YP_001259522.1| ExbB protein [Brucella ovis ATCC 25840]
gi|148370516|gb|ABQ60495.1| ExbB [Brucella ovis ATCC 25840]
Length = 310
Score = 195 bits (495), Expect = 6e-48, Method: Composition-based stats.
Identities = 53/225 (23%), Positives = 103/225 (45%), Gaps = 3/225 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
D+S + +FM VK ++ L I S+ +W+V + KS+ RR+ + ++
Sbjct: 73 PHDLSPWGMFMAADWVVKAVMIGLAIASLATWTVWVAKSLELAGARRRANKALKIIGHSA 132
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARS-PIGIQDRIDRMMDVAIARELE 126
+L +L G AA +A E + S AR+ G+++R+ + A+
Sbjct: 133 TLNDAVHALDGAKGPG-AAFVRAAEDEVRLSGPALARAGGEGLKERVASRLSRIEAKAGR 191
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLG 185
+ + L ++ S VG+ G V G+M F +I+ + N+ V PGI E+L++ +G
Sbjct: 192 RLAKGTGILATIGSVAPFVGLFGTVWGIMNSFINISEAQTTNLAVVAPGIAEALLATAIG 251
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
L +IP+ + Y+ F + + + ++SR + +
Sbjct: 252 LVAAIPAVVIYDVFARSITGYRALLADASAGVERLVSRDLDFRTA 296
>gi|306844657|ref|ZP_07477242.1| tonB-system energizer ExbB [Brucella sp. BO1]
gi|306274829|gb|EFM56599.1| tonB-system energizer ExbB [Brucella sp. BO1]
Length = 307
Score = 195 bits (495), Expect = 6e-48, Method: Composition-based stats.
Identities = 54/225 (24%), Positives = 103/225 (45%), Gaps = 3/225 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
D+S + +FM VK ++ L I S+ +W+V + KS+ RR+ + ++
Sbjct: 73 PHDLSPWGMFMAADWVVKAVMIGLAIASLATWTVWVAKSLELAGARRRANKALKIIGHSA 132
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARS-PIGIQDRIDRMMDVAIARELE 126
+L +L G AA +A E + S AR+ G+++R+ + A+
Sbjct: 133 TLNDAVHALDGMKGPG-AAFVRAAEDEVRLSGPALARAGGEGLKERVASRLSRIEAKAGR 191
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLG 185
+ + L ++ S VG+ G V G+M F +I+ + N+ V PGI E+L++ +G
Sbjct: 192 RLAKGTGILATIGSVAPFVGLFGTVWGIMNSFINISEAQTTNLAVVAPGIAEALLATAIG 251
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
L +IP+ + YN F + + + ++SR + +
Sbjct: 252 LVAAIPAVVIYNVFARSITGYRGLLADASAGVERLVSRDLDFRTA 296
>gi|254418272|ref|ZP_05031996.1| protein TolQ [Brevundimonas sp. BAL3]
gi|196184449|gb|EDX79425.1| protein TolQ [Brevundimonas sp. BAL3]
Length = 250
Score = 195 bits (495), Expect = 6e-48, Method: Composition-based stats.
Identities = 72/219 (32%), Positives = 120/219 (54%), Gaps = 4/219 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
++ LF+ VK ++ L S+ SW++II K+ F L RQ EFE+ SG+SLE
Sbjct: 10 MNPVELFLTADWVVKTVMIGLAAASLWSWTIIIDKAFRFTALNRQADEFEKAVQSGRSLE 69
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGA---RSPIGIQDRIDRMMDVAIARELEE 127
V L + + A+S+W+++ +GA + RIDR ++ I+RE +
Sbjct: 70 DVATQAGPAPEHALPRMLVIALSDWREARQRGALNDHQGDLLMTRIDRALNSLISRESQR 129
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
I L L +++A +G+ G V G+M F IA + N+ ++ P I E+L + +GL
Sbjct: 130 IENGLGVLSVVATASPFIGLFGTVWGIMNAFGRIAAAGNTNLTTVAPAIAEALFATAIGL 189
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ IAYNKF D+ KFA +++ FA++ A ++R+
Sbjct: 190 AAAIPAYIAYNKFSIDAGKFAGRLDAFADDLQAAVARRL 228
>gi|239814812|ref|YP_002943722.1| MotA/TolQ/ExbB proton channel [Variovorax paradoxus S110]
gi|239801389|gb|ACS18456.1| MotA/TolQ/ExbB proton channel [Variovorax paradoxus S110]
Length = 238
Score = 195 bits (495), Expect = 6e-48, Method: Composition-based stats.
Identities = 50/214 (23%), Positives = 89/214 (41%), Gaps = 4/214 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+ ++ Q K + LL S+ SW VII K+++ I +R + Q FW +
Sbjct: 5 FGLMNVWNQGDFVTKAVALLLIGMSLASWIVIIIKALDVIKYKRLAKH-SQDFWHSEDFA 63
Query: 71 TVCKSLKNHHNIGLAAIFMSA--MSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
T L + A+ + + ++ + + D I R + I +
Sbjct: 64 TALNKLGKDDSNPFRALALEGREAAAHHRNTKAHLHDALDVSDWITRALRNGIDAFTARL 123
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLC 187
L+ L S+ S +G+ G V G+ SI+ + + G I E+LI LGL
Sbjct: 124 QTGLAILASVGSTAPFIGLFGTVWGIYHALMSISTAGQATIDKVAGPIGEALIMTALGLA 183
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
V+IP+ + YN + +K ++ FA++ A
Sbjct: 184 VAIPAVLGYNALVRGNKFVLTKLNSFAHDLHAYF 217
>gi|261214638|ref|ZP_05928919.1| biopolymer transporter ExbD [Brucella abortus bv. 3 str. Tulya]
gi|260916245|gb|EEX83106.1| biopolymer transporter ExbD [Brucella abortus bv. 3 str. Tulya]
Length = 319
Score = 195 bits (495), Expect = 6e-48, Method: Composition-based stats.
Identities = 54/225 (24%), Positives = 103/225 (45%), Gaps = 3/225 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
D+S + +FM VK ++ L I S+ +W+V + KS+ RR+ + ++
Sbjct: 85 PHDLSPWGMFMAADWVVKAVMIGLAIASLATWTVWVAKSLELAGARRRANKALKIIGHSA 144
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARS-PIGIQDRIDRMMDVAIARELE 126
+L +L G AA +A E + S AR+ G+++R+ + A+
Sbjct: 145 TLNDAVHALDGAKGPG-AAFVRAAEDEVRLSGPALARAGGEGLKERVASRLSRIEAKAGR 203
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLG 185
+ + L ++ S VG+ G V G+M F +I+ + N+ V PGI E+L++ +G
Sbjct: 204 RLAKGTGILATIGSVAPFVGLFGTVWGIMNSFINISEAQTTNLAVVAPGIAEALLATAIG 263
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
L +IP+ + YN F + + + ++SR + +
Sbjct: 264 LVAAIPAVVIYNVFARSITGYRALLADASAGVERLVSRDLDFRTA 308
>gi|254875816|ref|ZP_05248526.1| TolQ protein [Francisella philomiragia subsp. philomiragia ATCC
25015]
gi|254841837|gb|EET20251.1| TolQ protein [Francisella philomiragia subsp. philomiragia ATCC
25015]
Length = 240
Score = 195 bits (495), Expect = 6e-48, Method: Composition-based stats.
Identities = 56/221 (25%), Positives = 108/221 (48%), Gaps = 3/221 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
IS+ L + V+ I+ L S+ SW+++ + + R + +F++LFW+G ++
Sbjct: 10 ISLIQLILHANFIVQLIMLGLVAMSVYSWAIMFEVNNRVKKYRNEQVQFDKLFWAGHHIQ 69
Query: 71 TVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ H G + IF S + E+ D G I + ++R + +AIA+E +E+
Sbjct: 70 KLYDYYLQHKENIFGKSIIFCSGLREFNNLKDTGILRGDTILEGMERTVSIAIAQEAKEL 129
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
KL L ++ + +G++G V G+M F ++ G + V P I E+LI+ LGL
Sbjct: 130 DRKLPALATIGAVSPYIGLVGTVWGIMSSFNTLGGVEQATISVVAPHIAEALIATALGLF 189
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
V+IP+ I +++ E F ++ +L ++ +
Sbjct: 190 VAIPAVIGHSRLSNQVDDVLSGYESFQDDLCILLLKEAHRD 230
>gi|227358185|ref|ZP_03842526.1| ExbB protein [Proteus mirabilis ATCC 29906]
gi|227161521|gb|EEI46558.1| ExbB protein [Proteus mirabilis ATCC 29906]
Length = 336
Score = 194 bits (494), Expect = 7e-48, Method: Composition-based stats.
Identities = 53/218 (24%), Positives = 106/218 (48%), Gaps = 2/218 (0%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S+ ++ L VK ++ L + SI++W++ K + LRR+ R +SL
Sbjct: 113 DLSVMGMYRNADLVVKSVMIGLLLASIVTWALFFAKGSYLLALRRRLRNESAQLVEAKSL 172
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+ + N A+F + +E +++ + + GI++R++ M+ +A + E+
Sbjct: 173 KEALAISQKFGNKSATAVFFND-AELERTYSQDSHVASGIKERVEMRMERRVAAIIRELG 231
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCV 188
+L ++ + +G+ G V G+M F IA + N+ V PGI E+L++ +GL
Sbjct: 232 RGNGYLATIGAISPFIGLFGTVWGIMNSFIGIAHSQTTNLAVVAPGIAEALLATAIGLIA 291
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ I YN F + ++ A ++SR +
Sbjct: 292 AIPAVIIYNIFARMISGYRGEIGDIATGVVTLVSRDLD 329
>gi|153008585|ref|YP_001369800.1| TonB-system energizer ExbB type-1 [Ochrobactrum anthropi ATCC
49188]
gi|151560473|gb|ABS13971.1| TonB-system energizer ExbB type-1 [Ochrobactrum anthropi ATCC
49188]
Length = 338
Score = 194 bits (494), Expect = 8e-48, Method: Composition-based stats.
Identities = 52/225 (23%), Positives = 104/225 (46%), Gaps = 3/225 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
D+S + +FM VK ++ L I S+ +W+V + K++ RR+ + ++
Sbjct: 104 PHDLSPWGMFMAADWVVKAVMIGLAIASLATWTVWVAKTLELAGARRRATKALKVIGHSA 163
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARS-PIGIQDRIDRMMDVAIARELE 126
+L +L G A + +A E + S AR+ G+++R+ + A+
Sbjct: 164 TLAEAVHALDGAKGPG-AVLVRAAEDEVRLSGPALARAGGEGLKERVSSRLSRIEAKAGR 222
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLG 185
+++ L ++ S VG+ G V G+M F +I+ + N+ V PGI E+L++ +G
Sbjct: 223 RLSKGTGILATIGSVAPFVGLFGTVWGIMNSFINISQAQTTNLAVVAPGIAEALLATAIG 282
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
L +IP+ + YN F + + + ++SR + +
Sbjct: 283 LVAAIPAVVIYNVFARSITGYRSLLADASAGVERLVSRDLDFRTA 327
>gi|90426011|ref|YP_534381.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris BisB18]
gi|90108025|gb|ABD90062.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris BisB18]
Length = 301
Score = 194 bits (494), Expect = 8e-48, Method: Composition-based stats.
Identities = 58/220 (26%), Positives = 105/220 (47%), Gaps = 4/220 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
D++ +FM VK ++ L + S+L+WSV + K++ T RR+ + + Q
Sbjct: 73 PHDLTPIGMFMAADSIVKMVMIGLALASVLTWSVWLTKTIELATARRRLGRDLGIVEASQ 132
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+L C L++ + +A + +A E ++S D GI++R+ + A
Sbjct: 133 TLREACAKLQD-ADSDIAVLARAAAGELQRSQDTANHD--GIKERVGSLFSRIEAGAARR 189
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
+T L ++ S G VG+ G V G+M F I+ + N+ V PGI E+L++ LGL
Sbjct: 190 MTRGTGILATIGSIGPFVGLFGTVWGIMNAFIGISKSQTTNLAVVAPGIAEALLATALGL 249
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ + YN F + + + E ++SR +
Sbjct: 250 VAAIPAVVIYNMFARSIMGYRGLLNDGSAELMRMVSRDLD 289
>gi|295097525|emb|CBK86615.1| outer membrane transport energization protein ExbB (TC 2.C.1.1.1)
[Enterobacter cloacae subsp. cloacae NCTC 9394]
Length = 228
Score = 194 bits (494), Expect = 8e-48, Method: Composition-based stats.
Identities = 48/217 (22%), Positives = 101/217 (46%), Gaps = 4/217 (1%)
Query: 16 LFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKS 75
++ + VK ++ L + S+++W++ KS ++ +R+ + ++ +SL+
Sbjct: 1 MYQHADIVVKIVMIGLILASVITWAIFFSKSAELLSQKRRLKREQKQLAEARSLDQASDI 60
Query: 76 LKNHHNIGLAAIFM-SAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSF 134
+ H L + + A +E + S G+ GI++R ++ +A + +
Sbjct: 61 TSSFHAKSLTTLLVNEAQNELELSA--GSEDNEGIKERTGFRLERRVAAVGRHMGRGNGY 118
Query: 135 LGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSS 193
L ++ + VG+ G V G+M F IA + N+ V PGI E+L++ +GL +IP+
Sbjct: 119 LATIGAISPFVGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGIAEALLATAIGLVAAIPAV 178
Query: 194 IAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
+ YN F + + A + + SR + N +
Sbjct: 179 VIYNIFARMIGSYKATLGDVAAQVLLLQSRDLDLNAA 215
>gi|91780432|ref|YP_555639.1| putative MotA/TolQ/ExbB proton channel [Burkholderia xenovorans
LB400]
gi|91693092|gb|ABE36289.1| outer membrane transport energization protein ExbB [Burkholderia
xenovorans LB400]
Length = 309
Score = 194 bits (493), Expect = 9e-48, Method: Composition-based stats.
Identities = 52/221 (23%), Positives = 95/221 (42%), Gaps = 11/221 (4%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YGL AL+ L + ++ LL I S+ SW ++I K + + R+ + ++
Sbjct: 84 NPYGLG-------ALWKNGDLVARFVLILLVIMSMGSWYIMITKFLEQLRANRRAKSADE 136
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
WS SL + L + A E ++ + ID +D AI
Sbjct: 137 QLWSAPSLAQGAEQLDGNSPFRFIAQVGI---EAGAHHEEALLEAVDRNTWIDVSIDRAI 193
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLI 180
+ + L+FLG++ S VG+ G V G+ +I ++ + G + E+LI
Sbjct: 194 TNVSNRLQDGLAFLGTVGSTAPFVGLFGTVWGIYHALTAIGIAGQASIDKVAGPVGEALI 253
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+GL V++P+ + YN + +K ++ F + +L
Sbjct: 254 MTAIGLAVAVPAVLGYNFLVRRNKSVMERVRAFGAQLHTVL 294
>gi|258591273|emb|CBE67570.1| TolQ protein [NC10 bacterium 'Dutch sediment']
Length = 239
Score = 194 bits (493), Expect = 9e-48, Method: Composition-based stats.
Identities = 63/233 (27%), Positives = 107/233 (45%), Gaps = 20/233 (8%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+++ +L +Q G+ + ++ +L FS++SW++I K F RR+ +F +F S ++L
Sbjct: 1 MNVVSLVVQAGVVAQAVLLILLGFSLMSWTLIFMKFGVFRRGRRESAQFLHIFRSAKNLT 60
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKG-------------------ARSPIGIQD 111
TV + K + ++F E + G A D
Sbjct: 61 TVFEESKRFTKSPVVSVFQEGYRELSQLVKGGQGPAAQWPTANEPRSAVPEAPLHKEPLD 120
Query: 112 RIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-V 170
I R + A +E+ + L FL + + VG+ G V G+M F SI S N+
Sbjct: 121 LISRTLRHASMKEVAQQERYLIFLATTGNVTPFVGLFGTVWGIMNAFASIGQAGSANLGA 180
Query: 171 SIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
PG+ E+LI+ GL +IP+ +AYN F+ ++ A +ME F EF + R
Sbjct: 181 VAPGVAEALITTAAGLGAAIPAVVAYNYFLNRVRRQATEMELFGLEFLTLAER 233
>gi|319792735|ref|YP_004154375.1| mota/tolq/exbb proton channel [Variovorax paradoxus EPS]
gi|315595198|gb|ADU36264.1| MotA/TolQ/ExbB proton channel [Variovorax paradoxus EPS]
Length = 238
Score = 194 bits (493), Expect = 1e-47, Method: Composition-based stats.
Identities = 50/214 (23%), Positives = 88/214 (41%), Gaps = 4/214 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+ ++ Q K + LL S+ SW VII K+++ I +R + Q FW +
Sbjct: 5 FGLMNVWNQGDFVTKAVAVLLIGMSLASWIVIIVKALDVIKYKRLAKN-SQDFWHSEDFA 63
Query: 71 TVCKSLKNHHNIGLAAIFMSA--MSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
T L + A+ + + ++ + + D I R + I +
Sbjct: 64 TALNKLGKDDSNPFRALALEGREAAAHHRNTKAHLHDALDVSDWITRALRNGIDAFTARL 123
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLC 187
L+ L S+ S +G+ G V G+ SI + + G I E+LI LGL
Sbjct: 124 QTGLAILASVGSTAPFIGLFGTVWGIYHALMSIGSAGQATIDKVAGPIGEALIMTALGLA 183
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
V+IP+ + YN + +K ++ FA++ A
Sbjct: 184 VAIPAVLGYNALVRGNKFVLTKLNSFAHDLHAYF 217
>gi|269103010|ref|ZP_06155707.1| MotA/TolQ/ExbB proton channel family protein [Photobacterium
damselae subsp. damselae CIP 102761]
gi|268162908|gb|EEZ41404.1| MotA/TolQ/ExbB proton channel family protein [Photobacterium
damselae subsp. damselae CIP 102761]
Length = 194
Score = 194 bits (493), Expect = 1e-47, Method: Composition-based stats.
Identities = 54/188 (28%), Positives = 90/188 (47%), Gaps = 3/188 (1%)
Query: 41 VIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHN--IGLAAIFMSAMSEWKKS 98
+II++S + FE FWSG L + K ++ + G IF + E+ +
Sbjct: 1 MIIKRSQVLSEATTRAHRFEDRFWSGVDLSQLYKEVEARKDDLTGSEQIFYAGFKEYARL 60
Query: 99 CDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFF 158
+ P + + R M VA++RE+EE+ L FL ++ S +G+ G V G+M F
Sbjct: 61 HRSNGKVPEAVMEGTGRAMRVALSREVEELETNLPFLATVGSISPYIGLFGTVWGIMHAF 120
Query: 159 QSIAGYYSNNVVSI-PGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEF 217
++ + + PGI E+L++ +GL +IP+ + YN+ K F EF
Sbjct: 121 IALGAVKQATLAMVAPGIAEALVATAMGLFAAIPAVMFYNRLTNRVAKLEHTYATFMEEF 180
Query: 218 SAILSRQT 225
S+IL RQ
Sbjct: 181 SSILHRQA 188
>gi|254719671|ref|ZP_05181482.1| tonB-system energizer ExbB [Brucella sp. 83/13]
gi|306840053|ref|ZP_07472840.1| tonB-system energizer ExbB [Brucella sp. NF 2653]
gi|306404867|gb|EFM61159.1| tonB-system energizer ExbB [Brucella sp. NF 2653]
Length = 307
Score = 194 bits (493), Expect = 1e-47, Method: Composition-based stats.
Identities = 54/225 (24%), Positives = 103/225 (45%), Gaps = 3/225 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
D+S + +FM VK ++ L I S+ +W+V + KS+ RR+ + ++
Sbjct: 73 PHDLSPWGMFMAADWVVKAVMIGLAIASLATWTVWVAKSLELAGARRRANKALKVIGHSA 132
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARS-PIGIQDRIDRMMDVAIARELE 126
+L +L G AA +A E + S AR+ G+++R+ + A+
Sbjct: 133 TLNDAVHALDGAKGPG-AAFVRAAEDEVRLSGPALARAGGEGLKERVASRLSRIEAKAGR 191
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLG 185
+ + L ++ S VG+ G V G+M F +I+ + N+ V PGI E+L++ +G
Sbjct: 192 RLAKGTGILATIGSVAPFVGLFGTVWGIMNSFINISEAQTTNLAVVAPGIAEALLATAIG 251
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
L +IP+ + YN F + + + ++SR + +
Sbjct: 252 LVAAIPAVVIYNVFARSITGYRALLADASAGVERLVSRDLDFRTA 296
>gi|182677523|ref|YP_001831669.1| MotA/TolQ/ExbB proton channel [Beijerinckia indica subsp. indica
ATCC 9039]
gi|182633406|gb|ACB94180.1| MotA/TolQ/ExbB proton channel [Beijerinckia indica subsp. indica
ATCC 9039]
Length = 246
Score = 194 bits (493), Expect = 1e-47, Method: Composition-based stats.
Identities = 61/223 (27%), Positives = 109/223 (48%), Gaps = 4/223 (1%)
Query: 7 AIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG 66
A +S LF+Q VK ++ LL + S W VI K + L+++ + + G
Sbjct: 12 AAHVLSPVELFLQADSVVKTVMILLVLASAWGWVVIFNKLIRLSVLQKRAAKLLKSVQEG 71
Query: 67 QSLETVCKSLKNHH-NIGLAAIFMSAMSEWKKSCDK--GARSPIGIQDRIDRMMDVAIAR 123
+ T+ +S N +++ + + E +S D +Q+RI R+ +A +
Sbjct: 72 LPVATLAESFDKAPANDPFVSVYKAMIEEHARSADLIYTDGQRDSLQERIHRVAHLASSH 131
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISI 182
++++ +L L ++ + VG+ G V G+M FQ IA + ++ V PGI E+L +
Sbjct: 132 AIDQLQSQLPGLATIGAVAPFVGLFGTVWGIMNSFQGIAASNNTSLSVVAPGIAEALFAT 191
Query: 183 LLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
LGL +IP+ + YN+ D K++ ++ F N F LSRQ
Sbjct: 192 ALGLVAAIPAVVFYNRIGTDISKYSKKLSAFINVFEIELSRQL 234
>gi|197121113|ref|YP_002133064.1| protein TolQ [Anaeromyxobacter sp. K]
gi|220915814|ref|YP_002491118.1| protein TolQ [Anaeromyxobacter dehalogenans 2CP-1]
gi|196170962|gb|ACG71935.1| protein TolQ [Anaeromyxobacter sp. K]
gi|219953668|gb|ACL64052.1| protein TolQ [Anaeromyxobacter dehalogenans 2CP-1]
Length = 257
Score = 194 bits (493), Expect = 1e-47, Method: Composition-based stats.
Identities = 55/226 (24%), Positives = 109/226 (48%), Gaps = 8/226 (3%)
Query: 7 AIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG 66
A ++ + G ++ LL S +SW++I++K + + Q +F + FW
Sbjct: 29 AAGGLNYLEIATNSGPVGIGVLALLLGASAVSWAIIVKKWLQIRRAQDQSVKFLETFWQS 88
Query: 67 QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDK-------GARSPIGIQDRIDRMMDV 119
+ L+ + ++ ++ L+ +F + E K + +G + ++R +
Sbjct: 89 KRLDAIYQAAESLGASPLSHVFRAGYVELSKVTARKNEGDPGAMSDQLGGIENVERALKR 148
Query: 120 AIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIES 178
A A E+ + ++ FLG+ +SA VG+ G V G+M F I + N+ ++ I E+
Sbjct: 149 AAASEVTALERQVPFLGTTASAAPFVGLFGTVWGIMRAFHEIYLMGNANLATVAKPISEA 208
Query: 179 LISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
LI+ +GL +IP+ +AYN F+ + +M F+N+F I+ R
Sbjct: 209 LIATAVGLFAAIPAVVAYNFFLSKIRVLDSEMTNFSNDFLNIVRRH 254
>gi|323497269|ref|ZP_08102288.1| TonB-system energizer ExbB type-1 [Vibrio sinaloensis DSM 21326]
gi|323317626|gb|EGA70618.1| TonB-system energizer ExbB type-1 [Vibrio sinaloensis DSM 21326]
Length = 281
Score = 194 bits (493), Expect = 1e-47, Method: Composition-based stats.
Identities = 57/225 (25%), Positives = 100/225 (44%), Gaps = 3/225 (1%)
Query: 3 NYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQL 62
+ L D+S ++ VK ++ L + SI W+V K + + ++ R+
Sbjct: 44 SNPLITHDLSPMGMYHAADWVVKAVMISLLLASIACWAVFFTKQIQVMFANQRTRKLLAN 103
Query: 63 FWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIA 122
+SL +L H +A I +A E S GA S GI++R+ ++ A
Sbjct: 104 LVVSESLTDAEHALSQHKGNEIALI-TAAQHEMHMS-SLGATSEDGIKERVQLRLERVQA 161
Query: 123 RELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLIS 181
++T L ++ S VG+ G V G+M F IA S +V + PGI E+L++
Sbjct: 162 ELGRKMTSLTGVLATIGSVSPFVGLFGTVWGIMNAFIGIAKAKSTTLVVVAPGIAEALLA 221
Query: 182 ILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+GL +IP+ + YN F K+ + + ++SR +
Sbjct: 222 TAIGLIAAIPAVMMYNYFTRYIAKYKALVADTSVATMVLVSRDLD 266
>gi|119775224|ref|YP_927964.1| MotA/TolQ/ExbB proton channel [Shewanella amazonensis SB2B]
gi|119767724|gb|ABM00295.1| MotA/TolQ/ExbB proton channel [Shewanella amazonensis SB2B]
Length = 229
Score = 193 bits (492), Expect = 1e-47, Method: Composition-based stats.
Identities = 73/219 (33%), Positives = 115/219 (52%), Gaps = 3/219 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
DIS LF+Q L VK ++ +L S+LSW+VIIQ+ + + +FE FWSG L
Sbjct: 4 DISFLGLFLQASLLVKLVMLVLVGLSVLSWAVIIQRRNLIKAAKSRSAKFEDKFWSGVDL 63
Query: 70 ETVCKSLKNH--HNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + L N GL A+F++ E+ + AR P + D R M V ++RELE+
Sbjct: 64 NRLYQELSARGDANAGLEAMFVTGFKEYSRLARLSARVPGAVMDGTYRAMRVTLSRELEK 123
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
+ L L ++ S +G+ G V G+M F ++ + + + P I E+LI+ +GL
Sbjct: 124 LETNLPLLATIGSTSPYIGLFGTVWGIMNAFIALGAVQNPTLGIVAPAIAEALIATAMGL 183
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ I YN++ + +K F EFS+IL RQ
Sbjct: 184 AAAIPAVIFYNRYSTEVEKLEGTYVNFMEEFSSILHRQA 222
>gi|315126273|ref|YP_004068276.1| inner membrane protein required for outer membrane integrity,
uptake of group A colicins and phage DNA
[Pseudoalteromonas sp. SM9913]
gi|315014787|gb|ADT68125.1| inner membrane protein required for outer membrane integrity,
uptake of group A colicins and phage DNA
[Pseudoalteromonas sp. SM9913]
Length = 204
Score = 193 bits (492), Expect = 1e-47, Method: Composition-based stats.
Identities = 60/196 (30%), Positives = 99/196 (50%), Gaps = 3/196 (1%)
Query: 37 LSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNH--HNIGLAAIFMSAMSE 94
+SW++I Q+ ++FEQ FWSG L + + + + G+ A+F S E
Sbjct: 1 MSWAIIFQRKKAISDALANAKKFEQRFWSGVDLSKLYNEISSRGGQSTGIEALFTSGFKE 60
Query: 95 WKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGM 154
+ + +S + + R M VA++RE+E++ LSFL ++ S +G+ G V G+
Sbjct: 61 FARHKKNTFQSAGIVMEGTHRSMRVALSREIEKLESSLSFLATVGSISPYIGLFGTVWGI 120
Query: 155 MGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGF 213
M F ++ + + PGI E+LI+ +GL +IP+ IAYN+F +K F
Sbjct: 121 MNAFIALGEVKQATLQMVAPGIAEALIATAMGLFAAIPAVIAYNRFANKVEKLESHYINF 180
Query: 214 ANEFSAILSRQTEGNI 229
EF+ IL RQ I
Sbjct: 181 MEEFANILHRQAATQI 196
>gi|153800449|ref|ZP_01955035.1| tolQ protein [Vibrio cholerae MZO-3]
gi|124124075|gb|EAY42818.1| tolQ protein [Vibrio cholerae MZO-3]
Length = 194
Score = 193 bits (492), Expect = 1e-47, Method: Composition-based stats.
Identities = 55/187 (29%), Positives = 91/187 (48%), Gaps = 3/187 (1%)
Query: 42 IIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNI--GLAAIFMSAMSEWKKSC 99
II++S R+ FE FWSG L + + +K + G+ IF + +E+ +
Sbjct: 3 IIKRSKVISAAEREADTFEDRFWSGMDLGALYQDVKKRKDDIYGIEEIFYAGFTEFARLR 62
Query: 100 DKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQ 159
+P + + R M VA+ARE++ + L FL ++ S +G+ G V G+M F
Sbjct: 63 KTNPGAPDFVMEGTGRAMRVAVAREVDSLETSLPFLATVGSISPYIGLFGTVWGIMHAFI 122
Query: 160 SIAGYYSNNVVSI-PGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFS 218
++ + + PGI E+LI+ +GL +IP+ +AYN+ K F+ EF
Sbjct: 123 ALGEVKQATLAMVAPGIAEALIATAIGLFAAIPAVMAYNRLSNKVSKLEHTYATFSEEFH 182
Query: 219 AILSRQT 225
IL RQ
Sbjct: 183 TILHRQA 189
>gi|315498696|ref|YP_004087500.1| mota/tolq/exbb proton channel [Asticcacaulis excentricus CB 48]
gi|315416708|gb|ADU13349.1| MotA/TolQ/ExbB proton channel [Asticcacaulis excentricus CB 48]
Length = 234
Score = 193 bits (492), Expect = 1e-47, Method: Composition-based stats.
Identities = 60/227 (26%), Positives = 115/227 (50%), Gaps = 3/227 (1%)
Query: 7 AIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG 66
A +S LF++ VK ++ LL + S+ SW++II+K L ++ FE +G
Sbjct: 6 AAESLSFIDLFLRADWVVKGVMLLLALGSLWSWAIIIEKGFKLAKLNKEAAGFEAELAAG 65
Query: 67 QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIG--IQDRIDRMMDVAIARE 124
++LE + + ++ S W + K +P G + R+DR ++ I+ E
Sbjct: 66 RALEDIAAKHGTQPTAPFPKLLVTVTSAWGEYKGKSISAPEGELLLSRVDRELNHVISTE 125
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISIL 183
+ + + LS L +++A +G+ G V G+M F +IA N+ ++ P I E+L +
Sbjct: 126 ADVMEDGLSLLAVVATAAPFIGLFGTVWGIMNAFSAIASQGDTNLATVAPAISEALFATA 185
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
+GL +IP+ I +N + +F ++EGFA+E ++ + G ++
Sbjct: 186 IGLGAAIPAYIFFNLYNAKVARFVGRLEGFADELMVSVTGRLGGKLA 232
>gi|90423486|ref|YP_531856.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris BisB18]
gi|90105500|gb|ABD87537.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris BisB18]
Length = 288
Score = 193 bits (492), Expect = 1e-47, Method: Composition-based stats.
Identities = 55/222 (24%), Positives = 102/222 (45%), Gaps = 6/222 (2%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
D+S +A+F+ VK +I L + S+ +W+V + K V + +R+ R +
Sbjct: 48 PHDLSPWAMFLAADNIVKAVIVGLALASLATWTVWLVKIVELTSAKRRARSAVRKLQRAD 107
Query: 68 SLETVCKSLKNH--HNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
SL + + + +A + +A+ E ++S D A G+++R+ + A
Sbjct: 108 SLVQARQQIDADWTRDGPVADLAQAALRETERSNDLSA---EGVKERLAIALSRIEAEAG 164
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILL 184
++ L ++ + +G+ G V G+M F IA + N+ V PGI E+L++ +
Sbjct: 165 RDMARGTGLLATIGATAPFIGLFGTVWGIMNSFVGIAQTKTTNLAVVAPGIAEALLATAI 224
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
GL +IP+ I YN F + + + E LSR E
Sbjct: 225 GLVAAIPAVIIYNVFARAIAGYRALLSDASGEVLQHLSRDLE 266
>gi|316933259|ref|YP_004108241.1| tonB-system energizer ExbB [Rhodopseudomonas palustris DX-1]
gi|315600973|gb|ADU43508.1| tonB-system energizer ExbB [Rhodopseudomonas palustris DX-1]
Length = 308
Score = 193 bits (492), Expect = 1e-47, Method: Composition-based stats.
Identities = 55/221 (24%), Positives = 107/221 (48%), Gaps = 4/221 (1%)
Query: 7 AIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG 66
+ ++S + +F+ + VK ++ L I S+++W++ I K + R + R +
Sbjct: 78 GMSELSPWTMFLNADIVVKIVMIGLAISSVITWTIFIAKKIELGRARIRLRRSLKQIGES 137
Query: 67 QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
+SL +L + H++ L+ + +A+ E K S G S GI++R + E
Sbjct: 138 RSLAEAQMALGDKHSV-LSMLLAAALREAKLSA--GLSSDEGIKERAASSFSEYVRAEGR 194
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLG 185
+ + FL ++ + +G+ G V G+M F I+ + N+ V PGI E+L++ +G
Sbjct: 195 HMRRGMGFLATIGATAPFIGLFGTVWGIMNSFIGISKSQTTNLAVVAPGIAEALLATAIG 254
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
L +IP+ I YN F + K + + + +LSR +
Sbjct: 255 LVAAIPAVIIYNHFSREIKVYLELVARASGAAGRLLSRDLD 295
>gi|260219673|emb|CBA26518.1| Biopolymer transport protein exbB [Curvibacter putative symbiont of
Hydra magnipapillata]
Length = 239
Score = 193 bits (492), Expect = 1e-47, Method: Composition-based stats.
Identities = 48/214 (22%), Positives = 85/214 (39%), Gaps = 4/214 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+ + L+ Q K + LL S+ SW VI+ K+++ + + E FW E
Sbjct: 5 LGLITLWTQGDWVTKSVAVLLLGMSLASWIVILIKTLDILKFKSLAARTE-YFWHSAEFE 63
Query: 71 TVCKSLKNHHNIGLAAIFMSA--MSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+L + + + + ++ + I D I R + +I
Sbjct: 64 EGIDTLGAPTDNPFVQLARAGQEATAHHRNTQTQLHDALDISDWISRSLRNSIDDSTARF 123
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLC 187
L+ L S+ S VG+ G V G+ I + + G I E+LI LGL
Sbjct: 124 QSGLAVLASVGSTAPFVGLFGTVWGIYHALMGIGASGQATIDKVAGPIGEALIMTALGLA 183
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
V+IP+ + YN + +K ++ FA++ A
Sbjct: 184 VAIPAVLGYNALVRGNKSILTKLNRFAHDLHAYF 217
>gi|152981614|ref|YP_001352054.1| biopolymer transport protein ExbB [Janthinobacterium sp. Marseille]
gi|151281691|gb|ABR90101.1| biopolymer transport protein ExbB [Janthinobacterium sp. Marseille]
Length = 242
Score = 193 bits (492), Expect = 1e-47, Method: Composition-based stats.
Identities = 56/229 (24%), Positives = 93/229 (40%), Gaps = 12/229 (5%)
Query: 3 NYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQL 62
YGL +L+ Q K + LL SI SW VI K++ + RR R
Sbjct: 5 PYGLE-------SLWSQGDFVTKGVAVLLVAMSIASWYVIATKALQLMQYRRAARAAGHE 57
Query: 63 FWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKK--SCDKGARSPIGIQDRIDRMMDVA 120
FW SL +L N A I + ++ + + + + D I + A
Sbjct: 58 FWDATSLTEGTATLGN--GNPFADIAEAGVTAMRHHEAHKGHLHDQLSVSDWITLSLRQA 115
Query: 121 IARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESL 179
I ++ ++ L S+ S VG+ G V G+ +I ++ + G + E+L
Sbjct: 116 IDETSAKLQSGMAVLASVGSTAPFVGLFGTVWGIYHALVAIGTSGQASIDKVAGPVGEAL 175
Query: 180 ISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
I LGL V+IP++ YN + +K +M F + A+ + N
Sbjct: 176 IMTALGLAVAIPATFGYNALVRGNKSVIAKMNKFGFDLHALFVTGSRAN 224
>gi|254700331|ref|ZP_05162159.1| tonB-system energizer ExbB [Brucella suis bv. 5 str. 513]
Length = 307
Score = 193 bits (491), Expect = 1e-47, Method: Composition-based stats.
Identities = 54/225 (24%), Positives = 102/225 (45%), Gaps = 3/225 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
D+S + +FM VK ++ L I S+ +W+V + KS+ RR+ + ++
Sbjct: 73 PHDLSPWGMFMAADWVVKAVMIGLAIASLATWTVWVAKSLELAGARRRANKALKIIGHSA 132
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARS-PIGIQDRIDRMMDVAIARELE 126
+L +L G AA +A E + S AR+ G ++R+ + A+
Sbjct: 133 TLNDAVHALDGAKGPG-AAFVRAAEDEVRLSGPALARAGGEGFKERVASRLSRIEAKAGR 191
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLG 185
+ + L ++ S VG+ G V G+M F +I+ + N+ V PGI E+L++ +G
Sbjct: 192 RLAKGTGILATIGSVAPFVGLFGTVWGIMNSFINISEAQTTNLAVVAPGIAEALLATAIG 251
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
L +IP+ + YN F + + + ++SR + +
Sbjct: 252 LVAAIPAVVIYNVFARSITGYRALLADASAGVERLVSRDLDFRTA 296
>gi|218513591|ref|ZP_03510431.1| protein transporter protein [Rhizobium etli 8C-3]
Length = 167
Score = 193 bits (491), Expect = 2e-47, Method: Composition-based stats.
Identities = 81/164 (49%), Positives = 117/164 (71%)
Query: 7 AIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG 66
A D+S+++LFMQ G+ VK ++ L S+ +W+++I K + + RRQF +FEQ+FWSG
Sbjct: 4 ATTDVSLWSLFMQAGIVVKLVMLGLIAASVWTWAIVIDKYLAYGRARRQFDKFEQVFWSG 63
Query: 67 QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
QSLE + +SL +N GLA+IF++AM EWKKS ++GARSPIG+Q RIDR MDV +ARE E
Sbjct: 64 QSLEELYRSLSERNNTGLASIFVAAMREWKKSFERGARSPIGLQMRIDRAMDVTLARETE 123
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ +L L ++ SAG +G+ G V+G+M FQ+IAG S N+
Sbjct: 124 YLGARLGSLATIGSAGPFIGLFGTVVGIMTSFQAIAGSKSTNLA 167
>gi|33519795|ref|NP_878627.1| TolQ protein [Candidatus Blochmannia floridanus]
gi|33504140|emb|CAD83402.1| TolQ protein [Candidatus Blochmannia floridanus]
Length = 249
Score = 193 bits (491), Expect = 2e-47, Method: Composition-based stats.
Identities = 65/225 (28%), Positives = 104/225 (46%), Gaps = 10/225 (4%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
++I LF++ V+ I +L IFSI+SWS+I + +R+ + FE FWSG L
Sbjct: 1 MNILGLFLKTNFLVQITIFILIIFSIVSWSIIFHRVFILKYEQRKLKSFENKFWSGIELP 60
Query: 71 TVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ + N N + IF E+ + I R R+M+ + ELE++
Sbjct: 61 RLYIEISNKKNQLSSVEHIFYIGFKEFSRLHKIKKCLSETIASRTLRVMNNTLNLELEKL 120
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV--------VSIPGIIESLI 180
+ +G++ S VG+ G VLG++ F ++ + N + PGI E+LI
Sbjct: 121 ESYIPLIGTIGSISPYVGLFGTVLGIIHVFIALDKISAVNSNHHMGHIHLIAPGIAEALI 180
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
S +GL V+IP+ +A+N F EF IL RQ
Sbjct: 181 STAIGLFVAIPAVMAFNYLTTQINNLNQNFNNFIEEFITILYRQV 225
>gi|17986648|ref|NP_539282.1| biopolymer transport EXBB protein [Brucella melitensis bv. 1 str.
16M]
gi|17982264|gb|AAL51546.1| biopolymer transport exbb protein [Brucella melitensis bv. 1 str.
16M]
Length = 290
Score = 193 bits (491), Expect = 2e-47, Method: Composition-based stats.
Identities = 54/225 (24%), Positives = 103/225 (45%), Gaps = 3/225 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
D+S + +FM VK ++ L I S+ +W+V + KS+ RR+ + ++
Sbjct: 56 PHDLSPWGMFMAADWVVKAVMIGLAIASLATWTVWVAKSLELAGARRRANKALKIIGHSA 115
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARS-PIGIQDRIDRMMDVAIARELE 126
+L +L G AA +A E + S AR+ G+++R+ + A+
Sbjct: 116 TLNDAVHALDGAKGPG-AAFVRAAEDEVRLSGPALARAGGEGLKERVASRLSRIEAKAGR 174
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLG 185
+ + L ++ S VG+ G V G+M F +I+ + N+ V PGI E+L++ +G
Sbjct: 175 RLAKGTGILATIGSVAPFVGLFGTVWGIMNSFINISEAQTTNLAVVAPGIAEALLATAIG 234
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
L +IP+ + YN F + + + ++SR + +
Sbjct: 235 LVAAIPAVVIYNVFARSITGYRALLADASAGVERLVSRDLDFRTA 279
>gi|115526568|ref|YP_783479.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris BisA53]
gi|115520515|gb|ABJ08499.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris BisA53]
Length = 302
Score = 193 bits (491), Expect = 2e-47, Method: Composition-based stats.
Identities = 57/228 (25%), Positives = 105/228 (46%), Gaps = 4/228 (1%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
+ + D++ +FM + VK ++ L + S+L+WSV + K + +R+ R
Sbjct: 67 IEPEPILPHDLTPIGMFMAADVIVKAVMIGLALASVLTWSVWLAKIIELADAKRRLRRDL 126
Query: 61 QLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVA 120
+ SL C L+ + +A + +A E ++S D + GI++R+ +
Sbjct: 127 GIVEQALSLRQSCDELRE-ADSDIAVLARAASGELQRSGDTASHD--GIKERVASLFARI 183
Query: 121 IARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESL 179
A +T L ++ S G VG+ G V G+M F I+ + N+ V PGI E+L
Sbjct: 184 EAAAARRMTRGTGILATIGSVGPFVGLFGTVWGIMNAFIGISKSQTTNLAVVAPGIAEAL 243
Query: 180 ISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEG 227
++ LGL +IP+ + +N F + + + E ++SR E
Sbjct: 244 LATALGLVAAIPAVVIFNMFARSITGYRGLLNDGSAELMRMVSRDLEA 291
>gi|197283944|ref|YP_002149816.1| biopolymer transport protein [Proteus mirabilis HI4320]
gi|194681431|emb|CAR40269.1| biopolymer transport protein [Proteus mirabilis HI4320]
Length = 336
Score = 193 bits (490), Expect = 2e-47, Method: Composition-based stats.
Identities = 53/218 (24%), Positives = 105/218 (48%), Gaps = 2/218 (0%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S+ ++ L VK ++ L + SI++W++ K + LRR+ R +SL
Sbjct: 113 DLSVMGMYRNADLVVKSVMIGLLLASIVTWALFFAKGSYLLALRRRLRNESAQLVEAKSL 172
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+ + N A F + +E +++ + + GI++R++ M+ +A + E+
Sbjct: 173 KEALAISQKFGNKSATADFFND-AELERTYSQDSHVASGIKERVEMRMERRVAAIIRELG 231
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCV 188
+L ++ + +G+ G V G+M F IA + N+ V PGI E+L++ +GL
Sbjct: 232 RGNGYLATIGAISPFIGLFGTVWGIMNSFIGIAHSQTTNLAVVAPGIAEALLATAIGLIA 291
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ I YN F + ++ A ++SR +
Sbjct: 292 AIPAVIIYNIFARMISGYRGEIGDIATGVVTLVSRDLD 329
>gi|170749570|ref|YP_001755830.1| MotA/TolQ/ExbB proton channel [Methylobacterium radiotolerans JCM
2831]
gi|170656092|gb|ACB25147.1| MotA/TolQ/ExbB proton channel [Methylobacterium radiotolerans JCM
2831]
Length = 229
Score = 193 bits (490), Expect = 2e-47, Method: Composition-based stats.
Identities = 68/222 (30%), Positives = 105/222 (47%), Gaps = 10/222 (4%)
Query: 7 AIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG 66
A D S LF+Q VK ++ LL I SI W+V+ +K + RRQ + F L SG
Sbjct: 10 AAHDFSFLGLFLQADPIVKGVMILLVIASIACWTVVFEKVIRLAAARRQAKAFANLVRSG 69
Query: 67 QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
SL+ + + H + +A+ W+ + + +DRI+R M A+ E++
Sbjct: 70 GSLDGEHRGIAGH-------VVKAAIDAWRD--QDSSETRAERRDRIERAMKGALTIEVK 120
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLG 185
+ LS L + S VG+ G V G+M F SIA ++ V PGI E+L + +G
Sbjct: 121 RLRTGLSLLATSGSTAPFVGLFGTVWGIMNSFSSIARSQDTSLAVVAPGIAEALFATAIG 180
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEG 227
L V+IP+ +AYNK D + + L+R G
Sbjct: 181 LVVAIPAVMAYNKLASDVSGIQSTFSSYISVLGNRLARDRAG 222
>gi|124266945|ref|YP_001020949.1| biopolymer transport ExbB protein [Methylibium petroleiphilum PM1]
gi|124259720|gb|ABM94714.1| biopolymer transport ExbB protein [Methylibium petroleiphilum PM1]
Length = 307
Score = 193 bits (490), Expect = 2e-47, Method: Composition-based stats.
Identities = 50/221 (22%), Positives = 97/221 (43%), Gaps = 12/221 (5%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YGL +L+ K ++ +L + S+ SW +I+ K + L RQ + +
Sbjct: 88 NPYGLE-------SLWRTSDGVAKAVLLILVVMSMGSWYIIVVKFIEQARLNRQAKLAAK 140
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
FWS S+ +L+ I + + KK G + + + + A+
Sbjct: 141 SFWSAGSVRQGADTLEQ--TSPFRFIAEAGLEATKK--HGGLFEHVDLNSWVTMSIQRAM 196
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLI 180
R + + L+FL ++ S VG+ G V G+ +I ++ + G + E+LI
Sbjct: 197 ERVQSRLQDGLAFLATVGSTAPFVGLFGTVWGIYHALTAIGVAGQASIDKVAGPVGEALI 256
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+GL V++P+ + YN + +K ++ F N+ ++L
Sbjct: 257 MTAIGLAVAVPAVLGYNWLVRRNKGSMEEVRAFGNDLHSVL 297
>gi|16126575|ref|NP_421139.1| MotA/TolQ/ExbB proton channel family protein [Caulobacter
crescentus CB15]
gi|221235357|ref|YP_002517794.1| TonB accessory protein exbB [Caulobacter crescentus NA1000]
gi|13423861|gb|AAK24307.1| MotA/TolQ/ExbB proton channel family protein [Caulobacter
crescentus CB15]
gi|220964530|gb|ACL95886.1| TonB accessory protein exbB [Caulobacter crescentus NA1000]
Length = 302
Score = 193 bits (490), Expect = 2e-47, Method: Composition-based stats.
Identities = 60/225 (26%), Positives = 107/225 (47%), Gaps = 7/225 (3%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
++ +FMQ G+ VK ++ L + S+ SW +++ K F L +Q +F + F +S
Sbjct: 75 HSLTPIGMFMQAGVVVKVVMIGLVLASVFSWVLLLTKIFEFAALNKQSDKFLEAFRGARS 134
Query: 69 LETVCK--SLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQD----RIDRMMDVAIA 122
+ + + S + +A + +A E + S G +D R ++ +
Sbjct: 135 IADIARISSSEEFEGNPMADMAAAASQEVELSRQAGLAVAGEHRDSTLSRATYAINAVQS 194
Query: 123 RELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLIS 181
+ ++ + FL S+ S G +G+ G V G+M F IA + N+ V PGI E+L++
Sbjct: 195 SLAKRLSGGMVFLASVGSGGPFIGLFGTVYGIMTSFIGIANTNTTNLAVVAPGIAEALLA 254
Query: 182 ILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+GL +IP+ I YN F + + EGF E +SRQ +
Sbjct: 255 TGIGLFAAIPAVIFYNYFQTRISAYGTRSEGFVAELMNAISRQLD 299
>gi|238024465|ref|YP_002908697.1| MotA/TolQ/ExbB proton channel [Burkholderia glumae BGR1]
gi|238025671|ref|YP_002909903.1| MotA/TolQ/ExbB proton channel [Burkholderia glumae BGR1]
gi|237879130|gb|ACR31462.1| MotA/TolQ/ExbB proton channel [Burkholderia glumae BGR1]
gi|237880336|gb|ACR32667.1| MotA/TolQ/ExbB proton channel [Burkholderia glumae BGR1]
Length = 244
Score = 193 bits (490), Expect = 2e-47, Method: Composition-based stats.
Identities = 51/221 (23%), Positives = 97/221 (43%), Gaps = 10/221 (4%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
M YG+A ++ Q + I L S++SW VI+ K + L + +
Sbjct: 1 MEQYGIA-------NVWQQGDFITRFIFVFLLGMSVVSWFVIVTKGLANRRLETMGKRAQ 53
Query: 61 QLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGA--RSPIGIQDRIDRMMD 118
FWS S + K+L + + A+ ++ ++ GA + + + + R +
Sbjct: 54 TRFWSTPSFDEGIKALGDGADNPYRAMALAGREANEQQAGGGASLQGSLSASEWVARGLR 113
Query: 119 VAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIE 177
A E+ + L+ LGS+ S VG+ G V G+ +I ++ + G + E
Sbjct: 114 NAFDDEVARLQNGLAVLGSIGSTAPFVGLFGTVWGIYHALMAIGASGQASLDHVAGPVGE 173
Query: 178 SLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFS 218
SLI +GL V+IP+ + +N +K+ + ++ F +E
Sbjct: 174 SLIMTAIGLFVAIPAVLGFNYVNRGNKRVSHRLNRFVHELH 214
>gi|154248193|ref|YP_001419151.1| TonB-system energizer ExbB type-1 [Xanthobacter autotrophicus Py2]
gi|154162278|gb|ABS69494.1| TonB-system energizer ExbB type-1 [Xanthobacter autotrophicus Py2]
Length = 327
Score = 192 bits (489), Expect = 3e-47, Method: Composition-based stats.
Identities = 56/224 (25%), Positives = 99/224 (44%), Gaps = 5/224 (2%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
D+S + +FM L VK ++ L S+++W+V KS+ + RR +
Sbjct: 96 PHDLSPWGMFMAADLVVKAVMVGLAFASLVTWTVWFAKSLELVFARRAVARTLDALQAAP 155
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+L ++ A + +A++EWK S GI++R+ + AR
Sbjct: 156 TLFDAAAAMPKDRGAAPATV-KAALAEWKVS---EGLPVEGIKERVAVALSRIEARAGRR 211
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
++ L ++ + VG+ G V G+M F I+ + N+ V PGI E+L++ LGL
Sbjct: 212 LSGGTGVLATIGATAPFVGLFGTVWGIMNAFIGISRAQTTNLAVVAPGIAEALLATALGL 271
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
+IP+ + YN F ++ + E LSR + S
Sbjct: 272 VAAIPAVVIYNLFARAIAAQKARLADTSAEVMRHLSRDLDRAAS 315
>gi|77360812|ref|YP_340387.1| inner membrane protein required for outer membrane integrity,
uptake of group A colicins and phage DNA
[Pseudoalteromonas haloplanktis TAC125]
gi|76875723|emb|CAI86944.1| inner membrane protein required for outer membrane integrity,
uptake of group A colicins and phage DNA
[Pseudoalteromonas haloplanktis TAC125]
Length = 204
Score = 192 bits (489), Expect = 3e-47, Method: Composition-based stats.
Identities = 59/196 (30%), Positives = 99/196 (50%), Gaps = 3/196 (1%)
Query: 37 LSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHH--NIGLAAIFMSAMSE 94
+SW++I Q+ ++FEQ FWSG L + + + + G+ A+F + E
Sbjct: 1 MSWAIIFQRKKAISDALSNAKKFEQKFWSGIDLSKLYSEISSRSGQSKGIEALFTAGFKE 60
Query: 95 WKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGM 154
+ + +S + + R M VA++RE+E++ LSFL ++ S +G+ G V G+
Sbjct: 61 FARHKKNTFQSAGIVMEGTHRSMRVALSREVEKLESSLSFLATVGSISPYIGLFGTVWGI 120
Query: 155 MGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGF 213
M F ++ + + PGI E+LI+ +GL +IP+ IAYN+F +K F
Sbjct: 121 MNAFIALGEVKQATLQMVAPGIAEALIATAMGLFAAIPAVIAYNRFANKVEKLETHYINF 180
Query: 214 ANEFSAILSRQTEGNI 229
EF+ IL RQ I
Sbjct: 181 MEEFANILHRQAATQI 196
>gi|254694330|ref|ZP_05156158.1| tonB-system energizer ExbB [Brucella abortus bv. 3 str. Tulya]
Length = 307
Score = 192 bits (489), Expect = 3e-47, Method: Composition-based stats.
Identities = 54/225 (24%), Positives = 103/225 (45%), Gaps = 3/225 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
D+S + +FM VK ++ L I S+ +W+V + KS+ RR+ + ++
Sbjct: 73 PHDLSPWGMFMAADWVVKAVMIGLAIASLATWTVWVAKSLELAGARRRANKALKIIGHSA 132
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARS-PIGIQDRIDRMMDVAIARELE 126
+L +L G AA +A E + S AR+ G+++R+ + A+
Sbjct: 133 TLNDAVHALDGAKGPG-AAFVRAAEDEVRLSGPALARAGGEGLKERVASRLSRIEAKAGR 191
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLG 185
+ + L ++ S VG+ G V G+M F +I+ + N+ V PGI E+L++ +G
Sbjct: 192 RLAKGTGILATIGSVAPFVGLFGTVWGIMNSFINISEAQTTNLAVVAPGIAEALLATAIG 251
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
L +IP+ + YN F + + + ++SR + +
Sbjct: 252 LVAAIPAVVIYNVFARSITGYRALLADASAGVERLVSRDLDFRTA 296
>gi|167567040|ref|ZP_02359956.1| MotA/TolQ/ExbB proton channel [Burkholderia oklahomensis EO147]
gi|167574117|ref|ZP_02366991.1| MotA/TolQ/ExbB proton channel [Burkholderia oklahomensis C6786]
Length = 286
Score = 192 bits (489), Expect = 3e-47, Method: Composition-based stats.
Identities = 50/221 (22%), Positives = 92/221 (41%), Gaps = 11/221 (4%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YGL AL+ + ++ LL + S+ SW ++I K + + R+ + ++
Sbjct: 57 NPYGLG-------ALWKNGDFVARFVLLLLVVMSMGSWYIMIAKFLEQLRANRRAKVADE 109
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
WS SL K L E + D + ID ++ AI
Sbjct: 110 QLWSAPSLAEGAKRLDEASPF---RFIAETAIEAGEHHDNALLEAVDRNTWIDVSVERAI 166
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLI 180
+ + L+FLG++ S VG+ G V G+ +I ++ + G + E+LI
Sbjct: 167 TNVSNRLQDGLAFLGTVGSTAPFVGLFGTVWGIYHALTAIGIAGQASIDKVAGPVGEALI 226
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+GL V++P+ + YN + +K ++ F + +L
Sbjct: 227 MTAIGLAVAVPAVLGYNFLVRRNKSVMERVRNFGAQLHTVL 267
>gi|294649529|ref|ZP_06726950.1| MotA/TolQ/ExbB family proton channel [Acinetobacter haemolyticus
ATCC 19194]
gi|292824590|gb|EFF83372.1| MotA/TolQ/ExbB family proton channel [Acinetobacter haemolyticus
ATCC 19194]
Length = 291
Score = 192 bits (489), Expect = 3e-47, Method: Composition-based stats.
Identities = 52/221 (23%), Positives = 91/221 (41%), Gaps = 11/221 (4%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YGL AL+ + + K + +L + SI +W +I K ++R E E+
Sbjct: 66 NPYGLE-------ALWREGDVIAKTTLFILVLMSIGTWYIIFSKVFQQSKVKRHGIEAER 118
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
FW +L + SL N I + K D I + + AI
Sbjct: 119 NFWEADTLNSAKDSLA--PNSSYRYIAEKGIHS-TKHHDGTLLERIDFNTWVTISIQRAI 175
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLI 180
+ + L+FL ++ S VG+ G V G+ +I ++ + G + E+LI
Sbjct: 176 EKVQSHLGNGLAFLATVGSTAPFVGLFGTVWGIYHALTAIGISGQASIDKVAGPVGEALI 235
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+GL V++P+ + YN +K + F ++ A+L
Sbjct: 236 MTAIGLAVAVPAVLGYNWLTRRNKAVMDNVRSFGSDLHAVL 276
>gi|303328318|ref|ZP_07358756.1| protein TolQ [Desulfovibrio sp. 3_1_syn3]
gi|302861648|gb|EFL84584.1| protein TolQ [Desulfovibrio sp. 3_1_syn3]
Length = 231
Score = 192 bits (488), Expect = 4e-47, Method: Composition-based stats.
Identities = 59/221 (26%), Positives = 108/221 (48%), Gaps = 2/221 (0%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
M+ S F++ Q L K ++ LL + SI SW ++IQK + R+ + F S
Sbjct: 1 MEFSFFSMIAQASLIAKAVLALLVLMSIGSWGMMIQKFIALNAASRKALSGAERFDKAAS 60
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
L +SL + L I + E+ +S + G S + + D + R + +A EL +
Sbjct: 61 LREAVQSLGSDPASPLYYIAHQGVLEFNRSKELGNSSEV-VVDNVRRALRQGVASELARL 119
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLC 187
LS L + ++ +G+ G V G+M F SI S ++ ++ PGI E+L++ +GL
Sbjct: 120 QRSLSLLATTANTAPFIGLFGTVWGIMNSFHSIGMLKSASLATVAPGISEALVATAIGLG 179
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
V++P+++ +N F+ + + FA F + R+ +
Sbjct: 180 VAVPATVGFNIFMGKLSQVDTLLVNFAGFFLNRVQRELNAH 220
>gi|118602712|ref|YP_903927.1| MotA/TolQ/ExbB proton channel [Candidatus Ruthia magnifica str. Cm
(Calyptogena magnifica)]
gi|118567651|gb|ABL02456.1| Cell division and transport-associated protein TolQ [Candidatus
Ruthia magnifica str. Cm (Calyptogena magnifica)]
Length = 223
Score = 192 bits (488), Expect = 4e-47, Method: Composition-based stats.
Identities = 58/219 (26%), Positives = 103/219 (47%), Gaps = 3/219 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+SIF+L + G V+ ++ +L + SI SW++I+ K I + + F Q F + LE
Sbjct: 4 LSIFSLILSAGFVVQMVMLILILMSIYSWTLILSKKKILIDTNKNIKLFHQNFSANIDLE 63
Query: 71 TV-CKSLKNH-HNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ ++LK + + IF + E + + I +R R+M+ E+ +
Sbjct: 64 KLAYQTLKKDINQSSMERIFSTGFQELTHTTSDFNQVLIIDAERAYRVMNTMANNEVNRL 123
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-VVSIPGIIESLISILLGLC 187
LS L ++S+ +G+ G V G+M F +A + PGI E+LI+ GL
Sbjct: 124 DSGLSILAMIASSSPYIGLFGTVWGIMHSFIGLASVKQATVAIVAPGIAEALIATAFGLF 183
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP++IAYN+ I + + F + + RQ
Sbjct: 184 AAIPATIAYNRLISQVESINNKYTAFVEQLFVLFQRQNR 222
>gi|300310025|ref|YP_003774117.1| biopolymer transport transmembrane protein [Herbaspirillum
seropedicae SmR1]
gi|300072810|gb|ADJ62209.1| biopolymer transport transmembrane protein [Herbaspirillum
seropedicae SmR1]
Length = 243
Score = 192 bits (488), Expect = 4e-47, Method: Composition-based stats.
Identities = 51/220 (23%), Positives = 87/220 (39%), Gaps = 8/220 (3%)
Query: 3 NYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQL 62
YGL +L+ Q K + LL SI SW VII K++ + LR+
Sbjct: 5 PYGLE-------SLWAQGDFVTKGVAVLLLAMSIASWYVIITKALQLLRLRKASAAAGHQ 57
Query: 63 FWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIA 122
FW +L +L + A + + + D + + AI
Sbjct: 58 FWDTTNLPEGVATLGQDNPFAEVAKAGVTAMSHHTAHKGHLHDQLSVSDWVTLSLRQAID 117
Query: 123 RELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLIS 181
++ ++ L S+ S VG+ G V G+ SI ++ + G + E+LI
Sbjct: 118 EASGKLQAGMAVLASVGSTAPFVGLFGTVWGIYHALVSIGTTGQASIDKVAGPVGEALIM 177
Query: 182 ILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
LGL V+IP++ YN + +K ++ F + A+
Sbjct: 178 TALGLAVAIPATFGYNALVRGNKTILAKLNKFGFDLHALF 217
>gi|92116361|ref|YP_576090.1| MotA/TolQ/ExbB proton channel [Nitrobacter hamburgensis X14]
gi|91799255|gb|ABE61630.1| outer membrane transport energization protein ExbB [Nitrobacter
hamburgensis X14]
Length = 337
Score = 192 bits (488), Expect = 4e-47, Method: Composition-based stats.
Identities = 57/220 (25%), Positives = 100/220 (45%), Gaps = 6/220 (2%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S + +FMQ + VK ++ L S+++W++ + K V RR+ + + SL
Sbjct: 100 DLSPWGMFMQADIVVKAVMVGLAFASLVTWTIWLAKGVELAAARRRAQSCVRKLARADSL 159
Query: 70 ETVCKSLKN--HHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ +A + +A E K+S D + GI++R+ + AR E
Sbjct: 160 AAAQAETADGWTGQGTVAELLEAAEGELKRSRD---LTAEGIKERLAIALSRIEARAGRE 216
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
+ L ++ + VG+ G V G+M F I+ + N+ V PGI E+L++ LGL
Sbjct: 217 VARGTGLLATIGATAPFVGLFGTVWGIMNAFIGISLSKTTNLAVVAPGIAEALLATALGL 276
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ I YN F + + + E +SR E
Sbjct: 277 VAAIPAVIIYNVFARALSSYRALLSDASGEIIQHISRDLE 316
>gi|119898621|ref|YP_933834.1| putative biopolymer transport protein ExbB [Azoarcus sp. BH72]
gi|119671034|emb|CAL94947.1| putative biopolymer transport protein ExbB [Azoarcus sp. BH72]
Length = 273
Score = 192 bits (488), Expect = 4e-47, Method: Composition-based stats.
Identities = 52/221 (23%), Positives = 88/221 (39%), Gaps = 12/221 (5%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YGL AL+ K + +L + SI SW +I K L RQ +
Sbjct: 39 NPYGLE-------ALWSAGDFVAKGTLAILVVMSIGSWYIIFSKLYEQAKLNRQGNSANK 91
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
FW ++ ++L N I S + G I + + I + A
Sbjct: 92 TFWGAGDVDKGLETL--DKNSAYHYIAKSGND--ATAHHDGLLQFIDVNEWIQLSIHRAT 147
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLI 180
+ + L+FL ++ S VG+ G V G+ +I ++ + G + E+LI
Sbjct: 148 EKVQSRLQGGLAFLATVGSTAPFVGLFGTVWGIYHALTAIGVAGQASIDKVAGPVGEALI 207
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+GL V++P+ + YN + +K + F E A+L
Sbjct: 208 MTAIGLAVAVPAVLGYNWLVRRNKAALEDVRSFGAELHAVL 248
>gi|328675511|gb|AEB28186.1| MotA/TolQ/ExbB proton channel family protein [Francisella cf.
novicida 3523]
Length = 235
Score = 191 bits (487), Expect = 4e-47, Method: Composition-based stats.
Identities = 56/221 (25%), Positives = 107/221 (48%), Gaps = 3/221 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
IS+ L + V+ I+ L S+ SW+++ + + R + +F++LFW+G ++
Sbjct: 5 ISLVELVLHANFIVQLIMLALVAMSVYSWAIMFEVNNRVKKYRNEQVQFDKLFWAGHHIQ 64
Query: 71 TVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ H G + IF S + E+ D I + ++R + +AIA+E +E+
Sbjct: 65 KLYDYYLQHKENIFGKSIIFCSGLREFNNLKDTCMLRGDTILEGMERTVSIAIAQEAKEL 124
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
KL L ++ + +G++G V G+M F ++ G + V P I E+LI+ LGL
Sbjct: 125 DRKLPALATIGAVAPYIGLVGTVWGIMSSFNTLGGVEQATISVVAPHIAEALIATALGLF 184
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
V+IP+ I ++K E F ++ +L ++ +
Sbjct: 185 VAIPAVIGHSKLSNQVDDILSSYESFQDDLCILLLKEAHRD 225
>gi|257455251|ref|ZP_05620486.1| protein TolQ [Enhydrobacter aerosaccus SK60]
gi|257447213|gb|EEV22221.1| protein TolQ [Enhydrobacter aerosaccus SK60]
Length = 242
Score = 191 bits (487), Expect = 4e-47, Method: Composition-based stats.
Identities = 65/217 (29%), Positives = 111/217 (51%), Gaps = 3/217 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
I + +L + VK I+ +L S+L W I + S R FE+ FWSG L
Sbjct: 5 IDLVSLVTHASIFVKIIMGILLFASLLCWVTIFRLSSRLAIATRADNYFEKTFWSGVELP 64
Query: 71 TVCKSLKNHHN-IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
T+ K ++ + + GL IF SE+ K K ++ + + ++R + V + R+ E+
Sbjct: 65 TLYKGVQGNPDRSGLEQIFFIGFSEFLKLL-KNTQARSDVIEGVERKLRVGLGRQQLELE 123
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCV 188
+ L L S++S +G+LG V G+M F ++ + ++ PGI E+LI+ LGL
Sbjct: 124 QGLPLLASIASVSPYIGLLGTVWGIMTAFMGLSTSSQATLAAVAPGIAEALIATALGLFA 183
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+++A+N F + K F +E + +L RQT
Sbjct: 184 AIPAALAFNHFTAKNDKVYQSRSLFCDEMTGMLLRQT 220
>gi|121610019|ref|YP_997826.1| MotA/TolQ/ExbB proton channel [Verminephrobacter eiseniae EF01-2]
gi|121554659|gb|ABM58808.1| MotA/TolQ/ExbB proton channel [Verminephrobacter eiseniae EF01-2]
Length = 239
Score = 191 bits (487), Expect = 5e-47, Method: Composition-based stats.
Identities = 46/214 (21%), Positives = 87/214 (40%), Gaps = 4/214 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
I +++Q + + T+L S+ SW VI+ K+++ I +Q R + FW +
Sbjct: 5 FGIANVWIQGDFVTRAVATMLLAMSLASWIVILLKALDLIRFNKQARAAQD-FWHSEDFA 63
Query: 71 TVCKSLKNHHNIGLAAIFMSA--MSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
L + + + ++ + + D + R + I +
Sbjct: 64 AGLTQLGTDPHNPFLQLAREGREATAHHRNTQAHLHDQLDMSDWVTRCLRNCIDAFTARL 123
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLC 187
L+ L S+ S +G+ G V G+ SI + + + G I E+LI LGL
Sbjct: 124 QSGLAILASVGSTAPFIGLFGTVWGIYHALLSIGTSGQSTIDKVAGPIGEALIMTALGLA 183
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
V+IP+ + YN + +K + FA++ A
Sbjct: 184 VAIPAVLGYNALVRGNKSILGSLNSFAHDLHAYF 217
>gi|295690488|ref|YP_003594181.1| MotA/TolQ/Exbb proton channel [Caulobacter segnis ATCC 21756]
gi|295432391|gb|ADG11563.1| MotA/TolQ/ExbB proton channel [Caulobacter segnis ATCC 21756]
Length = 297
Score = 191 bits (487), Expect = 5e-47, Method: Composition-based stats.
Identities = 60/226 (26%), Positives = 107/226 (47%), Gaps = 7/226 (3%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
++ +F+ G VK ++ L + S+ SW +++ K F L +Q +F + F +
Sbjct: 69 AHSLTPVGMFLAAGAVVKVVMIGLILASVFSWVLLLTKIFEFAGLNKQSDKFLEAFRGAR 128
Query: 68 SLETVCK--SLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQD----RIDRMMDVAI 121
S+ + + S + +A + +A E + S G + +D R ++
Sbjct: 129 SIADIARISSSEEFEGNPMADMAAAASQEVELSRQAGLQVAGEHRDSTLARATYAINAVQ 188
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLI 180
A + ++ + FL S+ SAG +G+ G V G+M F IA + N+ V PGI E+L+
Sbjct: 189 ASLAKRLSGGMVFLASVGSAGPFIGLFGTVYGIMTSFIGIANTNTTNLAVVAPGIAEALL 248
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+ +GL +IP+ I YN F + + EGF E +SRQ +
Sbjct: 249 ATGIGLFAAIPAVIFYNYFQTRISGYGTRSEGFVAELMNAISRQLD 294
>gi|86157090|ref|YP_463875.1| MotA/TolQ/ExbB proton channel [Anaeromyxobacter dehalogenans 2CP-C]
gi|85773601|gb|ABC80438.1| Cell division and transport-associated protein TolQ
[Anaeromyxobacter dehalogenans 2CP-C]
Length = 247
Score = 191 bits (487), Expect = 5e-47, Method: Composition-based stats.
Identities = 55/226 (24%), Positives = 109/226 (48%), Gaps = 8/226 (3%)
Query: 7 AIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG 66
A ++ + G ++ LL S +SW++I++K + + Q +F + FW
Sbjct: 19 AAGGLNYLEIATNSGPVGIGVLALLLGASAVSWAIIVKKWLQIRRAQDQSVKFLETFWQS 78
Query: 67 QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDK-------GARSPIGIQDRIDRMMDV 119
+ L+ + ++ ++ L+ +F + E K + +G + ++R +
Sbjct: 79 KRLDAIYQAAESLGASPLSHVFRAGYVELSKVTARKNEGDPGAMSDQLGGIENVERALKR 138
Query: 120 AIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIES 178
A A E+ + ++ FLG+ +SA VG+ G V G+M F I + N+ ++ I E+
Sbjct: 139 AAASEVTALERQVPFLGTTASAAPFVGLFGTVWGIMRAFHEIYLMGNANLATVAKPISEA 198
Query: 179 LISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
LI+ +GL +IP+ +AYN F+ + +M F+N+F I+ R
Sbjct: 199 LIATAVGLFAAIPAVVAYNFFLSKIRVLDSEMTNFSNDFLNIVRRH 244
>gi|134093598|ref|YP_001098673.1| biopolymer transport ExbB protein [Herminiimonas arsenicoxydans]
gi|133737501|emb|CAL60544.1| Biopolymer transport exbB protein [Herminiimonas arsenicoxydans]
Length = 242
Score = 191 bits (487), Expect = 5e-47, Method: Composition-based stats.
Identities = 55/229 (24%), Positives = 93/229 (40%), Gaps = 12/229 (5%)
Query: 3 NYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQL 62
YGL +L+ Q K + LL SI SW VI K++ + RR R
Sbjct: 5 PYGLE-------SLWSQGDFVTKGVAILLVAMSIASWYVIATKALQLMQYRRAARAAGHE 57
Query: 63 FWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKK--SCDKGARSPIGIQDRIDRMMDVA 120
FW SL +L + A+I + ++ + + + + D I + A
Sbjct: 58 FWDATSLSEGTATLGS--GNPFASIAEAGVTAMRHHEAHKGHLHDELSVSDWITLSLRQA 115
Query: 121 IARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESL 179
I ++ ++ L S+ S VG+ G V G+ +I ++ + G + E+L
Sbjct: 116 IDETSAKLQTGMAVLASVGSTAPFVGLFGTVWGIYHALVAIGTSGQASIDKVAGPVGEAL 175
Query: 180 ISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
I LGL V+IP++ YN + +K +M F + A+ N
Sbjct: 176 IMTALGLAVAIPATFGYNALVRGNKSLIAKMNKFGFDLHALFVTGARAN 224
>gi|78060438|ref|YP_367013.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. 383]
gi|77964988|gb|ABB06369.1| outer membrane transport energization protein ExbB [Burkholderia
sp. 383]
Length = 311
Score = 191 bits (487), Expect = 5e-47, Method: Composition-based stats.
Identities = 46/221 (20%), Positives = 94/221 (42%), Gaps = 11/221 (4%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YGL AL+ + ++ LL + S+ SW V++ K + + + ++
Sbjct: 75 NPYGLG-------ALWANGDFVARFVLALLVVMSLGSWYVMVTKFIEQARANSRAKSADE 127
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
W+ +L L + I +A+ E + D + I+ ++ +I
Sbjct: 128 QVWNAPTLAEGTAQLDDASPFRF--IAENAI-EAGEHHDSALLDSVDRNTWIELNIERSI 184
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLI 180
+ + L+FLG++ S VG+ G V G+ +I ++ + G + E+LI
Sbjct: 185 TNVSNRLQDGLAFLGTVGSTAPFVGLFGTVWGIYHALTAIGIAGQASIDKVAGPVGEALI 244
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+GL V++P+ + YN + +K ++ F + +L
Sbjct: 245 MTAIGLAVAVPAVLGYNFLVRRNKSVMERVRNFGAQLHTVL 285
>gi|254372332|ref|ZP_04987823.1| hypothetical protein FTCG_01399 [Francisella tularensis subsp.
novicida GA99-3549]
gi|151570061|gb|EDN35715.1| hypothetical protein FTCG_01399 [Francisella novicida GA99-3549]
Length = 235
Score = 191 bits (487), Expect = 5e-47, Method: Composition-based stats.
Identities = 56/221 (25%), Positives = 108/221 (48%), Gaps = 3/221 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
IS+ L + V+ I+ L S+ SW+++++ + R + +F++LFW+G ++
Sbjct: 5 ISLVELVLHANFIVQLIMLALVAMSVYSWAIMLEVNKRVKKYRNEQVQFDKLFWAGHHIQ 64
Query: 71 TVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ H G + IF S + E+ D I + ++R + +AIA+E +E+
Sbjct: 65 KLYDYYLQHKENIFGKSIIFCSGLREFNNLKDTCMLRGDTILEGMERTVSIAIAQEAKEL 124
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
KL L ++ + +G++G V G+M F ++ G + V P I E+LI+ LGL
Sbjct: 125 DRKLPALATIGAVAPYIGLVGTVWGIMSSFNTLGGVEQATISVVAPHIAEALIATALGLF 184
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
V+IP+ I ++K E F ++ +L ++ +
Sbjct: 185 VAIPAVIGHSKLSNQVDDILSSYESFQDDLCILLLKEAHRD 225
>gi|167588865|ref|ZP_02381253.1| MotA/TolQ/ExbB proton channel [Burkholderia ubonensis Bu]
Length = 265
Score = 191 bits (486), Expect = 6e-47, Method: Composition-based stats.
Identities = 50/221 (22%), Positives = 93/221 (42%), Gaps = 11/221 (4%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YGL AL+ + +++LL I S+ SW ++I K + R+ + ++
Sbjct: 34 NPYGLG-------ALWKNGDFVARFVLSLLVIMSMGSWYIMIAKFLEQFRANRRAKLADE 86
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
WS SL K L + E + D+ + ID ++ AI
Sbjct: 87 QLWSAPSLSDGAKLLDDASPF---RFIAETAIEAGEHHDEALLEAVDRNTWIDVSVERAI 143
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLI 180
+ + L+FL ++ S VG+ G V G+ +I ++ + G + E+LI
Sbjct: 144 TNVSNRLQDGLAFLATVGSTAPFVGLFGTVWGIYHALTAIGIAGQASIDKVAGPVGEALI 203
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+GL V++P+ + YN + +K ++ F + +L
Sbjct: 204 MTAIGLAVAVPAVLGYNFLVRRNKSVMERVRNFGAQLHTVL 244
>gi|310816769|ref|YP_003964733.1| tonB-system energizer ExbB [Ketogulonicigenium vulgare Y25]
gi|308755504|gb|ADO43433.1| tonB-system energizer ExbB [Ketogulonicigenium vulgare Y25]
Length = 311
Score = 191 bits (486), Expect = 6e-47, Method: Composition-based stats.
Identities = 57/224 (25%), Positives = 99/224 (44%), Gaps = 3/224 (1%)
Query: 5 GLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFW 64
GL D+S ++ Q + VK ++ L +I++W V++ K + R + R +L
Sbjct: 79 GLGGHDMSPMGMYNQADVVVKSVMIGLAAAAIVTWIVLVAKWLQLTGARGRARRTLRLLE 138
Query: 65 SGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCD-KGARSPIGIQDRIDRMMDVAIAR 123
+SL +L A + +A E S D G G+++R+ M+
Sbjct: 139 QSRSLSDASAALAGRSGAP-ALLVRAASDEIAASQDVLGQVDGEGVKERVASRMNRIEIA 197
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISI 182
I + L ++ S G VG+ G V G+M F IA + N+ V PGI E+L++
Sbjct: 198 AGRRIGRGVGLLATIGSVGPFVGLFGTVWGIMNSFIGIAETQTTNLAVVAPGIAEALLAT 257
Query: 183 LLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
LGL +IP+ + YN F + + + ++SR +
Sbjct: 258 ALGLVAAIPAVVIYNGFARAITGYRQLLGDVSASIGRLVSRDLD 301
>gi|242279947|ref|YP_002992076.1| MotA/TolQ/ExbB proton channel [Desulfovibrio salexigens DSM 2638]
gi|242122841|gb|ACS80537.1| MotA/TolQ/ExbB proton channel [Desulfovibrio salexigens DSM 2638]
Length = 239
Score = 191 bits (486), Expect = 6e-47, Method: Composition-based stats.
Identities = 58/217 (26%), Positives = 107/217 (49%), Gaps = 4/217 (1%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
IFA+ Q + VKC++ LL S+ SW++I K ++ R + ++ SL +
Sbjct: 9 IFAMLDQATIVVKCVLGLLAAMSLWSWTIIFWKLISLGRARTLILKGNKIMEEADSLSSG 68
Query: 73 CKSLKNHHNIGLAAIFMSAMSEWK---KSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+ L I +A+ E++ KS + I+D + R++ ++ EL+++T
Sbjct: 69 LTEISKTEGSPLNRIGTAAVKEYRVLEKSAVSASHKRRLIKDTLRRILRRKVSSELKKLT 128
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI-AGYYSNNVVSIPGIIESLISILLGLCV 188
LSFL + ++ +G+ G V G+M F +I + + PGI E+L++ +GL V
Sbjct: 129 SSLSFLATCANGAPFIGLFGTVWGIMNSFHAIGSAKSAALAAVAPGISEALVATAIGLGV 188
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP++I YN F+ ++ FA F + R+
Sbjct: 189 AIPATIFYNFFLGVLNGIETELVNFAGTFLNRVEREV 225
>gi|50120210|ref|YP_049377.1| biopolymer transport protein [Pectobacterium atrosepticum SCRI1043]
gi|49610736|emb|CAG74181.1| biopolymer transport protein [Pectobacterium atrosepticum SCRI1043]
Length = 258
Score = 191 bits (486), Expect = 6e-47, Method: Composition-based stats.
Identities = 44/214 (20%), Positives = 87/214 (40%), Gaps = 3/214 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+ I + Q + + +L I S+LSW+V++ K+ L + + FW SL+
Sbjct: 4 LDIHHFWQQGDVVTHSVAIILLIMSLLSWTVMLLKARQLFALNKSVQYSRNTFWQATSLQ 63
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCD--KGARSPIGIQDRIDRMMDVAIARELEEI 128
+ + + + K + + D + R + + ++
Sbjct: 64 ESVEKFGKQRFNPFRDLVIEGHALLKHPHKFSSTLGGHVDLSDWLVRGLSNTLDTNSGKL 123
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLC 187
L L S+ S +G+LG V G+ Q+I+ ++ + G + E+LI GL
Sbjct: 124 QSGLGTLASIGSTAPFIGLLGTVWGIFHALQTISTIGQPDLAQVAGPVGEALIMTAFGLF 183
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
V+IP+ + +N ++ M FA++ A L
Sbjct: 184 VAIPAVLGFNAINRRNRIVLHAMNRFAHDLHAYL 217
>gi|86749211|ref|YP_485707.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris HaA2]
gi|86572239|gb|ABD06796.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris HaA2]
Length = 313
Score = 191 bits (486), Expect = 6e-47, Method: Composition-based stats.
Identities = 51/221 (23%), Positives = 107/221 (48%), Gaps = 4/221 (1%)
Query: 7 AIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG 66
+ ++S +++F+Q + VK ++ L + S+++W+++I K + R + R +
Sbjct: 83 GLTELSPWSMFLQADIVVKAVMVGLALASMITWTILIAKKIELGRARWRLRSALKQIADA 142
Query: 67 QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
+S+ +L + ++ + +A+ E + S G S GI++R + E
Sbjct: 143 RSMSEAQLALGD-KTSPVSMLLAAALREARVSA--GLASDEGIKERAASSFSEIVRAESR 199
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLG 185
+ + FL ++ + +G+ G V G+M F I+ + N+ V PGI E+L++ +G
Sbjct: 200 HMRHGMGFLATIGATAPFIGLFGTVWGIMNSFIGISKSQTTNLAVVAPGIAEALLATAIG 259
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
L +IP+ I YN F + K + + + +LSR +
Sbjct: 260 LVAAIPAVIIYNHFSREIKVYLEMVARASGAALRLLSRDLD 300
>gi|170734612|ref|YP_001773726.1| MotA/TolQ/ExbB proton channel [Burkholderia cenocepacia MC0-3]
gi|169820650|gb|ACA95231.1| MotA/TolQ/ExbB proton channel [Burkholderia cenocepacia MC0-3]
Length = 246
Score = 191 bits (486), Expect = 6e-47, Method: Composition-based stats.
Identities = 49/221 (22%), Positives = 94/221 (42%), Gaps = 10/221 (4%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
M YG+A ++ Q + I L S++SW VI+ K L + +
Sbjct: 1 MEQYGIA-------NVWQQGDFVTRFIFVFLIGMSVVSWFVILTKGFANRRLESLGKRAQ 53
Query: 61 QLFWSGQSLETVCKSLKNHHNIGLAAIFMSA--MSEWKKSCDKGARSPIGIQDRIDRMMD 118
FWS S+ +L + A+ ++ +E + + + + + R +
Sbjct: 54 TGFWSSASISDGIAALGERGDNPYRALVLAGREANEQHAGNEPSMQGSLSASEWVARGLR 113
Query: 119 VAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIE 177
A E+ + L+ LGS+ S VG+ G V G+ +I ++ + G + E
Sbjct: 114 NAFDDEVARLQNGLAVLGSIGSTAPFVGLFGTVWGIYHALMAIGMSGQASLDHVAGPVGE 173
Query: 178 SLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFS 218
SL+ +GL V+IP+ + +N +K+ + ++ FA+E
Sbjct: 174 SLVMTAIGLFVAIPAVLGFNYVNRGNKRVSHRLNRFAHELH 214
>gi|91782826|ref|YP_558032.1| biopolymer transport transmembrane protein, ExbB/TolQ [Burkholderia
xenovorans LB400]
gi|91686780|gb|ABE29980.1| outer membrane transport energization protein ExbB [Burkholderia
xenovorans LB400]
Length = 301
Score = 191 bits (486), Expect = 6e-47, Method: Composition-based stats.
Identities = 50/221 (22%), Positives = 92/221 (41%), Gaps = 11/221 (4%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YGL AL+ + ++ LL + S+ SW ++I K V R+ + ++
Sbjct: 72 NPYGLG-------ALWKNGDFVARFVLILLVLMSMGSWYIMITKFVEQFRANRRAKSADE 124
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
W+ SL K L E + D+ + ID ++ AI
Sbjct: 125 QLWTAPSLVEGAKLLDEASPF---RFIAETAIEAGEHHDEALLEAVDRNTWIDTSVERAI 181
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLI 180
+ + L+FLG++ S VG+ G V G+ +I ++ + G + E+LI
Sbjct: 182 TNVSNRLQDGLAFLGTVGSTAPFVGLFGTVWGIYHALTAIGIAGQASIDKVAGPVGEALI 241
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+GL V++P+ + YN + +K ++ F + +L
Sbjct: 242 MTAIGLAVAVPAVLGYNFLVRRNKSVMERVRAFGAQLHTVL 282
>gi|171463100|ref|YP_001797213.1| protein TolQ [Polynucleobacter necessarius subsp. necessarius
STIR1]
gi|171192638|gb|ACB43599.1| protein TolQ [Polynucleobacter necessarius subsp. necessarius
STIR1]
Length = 218
Score = 191 bits (486), Expect = 6e-47, Method: Composition-based stats.
Identities = 68/225 (30%), Positives = 113/225 (50%), Gaps = 12/225 (5%)
Query: 7 AIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG 66
+ D+S L + L V+ +I LL S+ SW++I +K+ +R+ FE+ FW+G
Sbjct: 3 STQDLSFLPLVLNASLLVQLVILLLLSMSVASWTIIFKKTAVLRGVRQDTERFERDFWAG 62
Query: 67 QSLETVCKSLKN--HHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARE 124
L T+ ++ + + L IF + M E+ K + D R M A RE
Sbjct: 63 GDLNTLLEAAQRNTRSDAVLEHIFEAGMQEFTKGRE---------IDAARRAMKAAYQRE 113
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISIL 183
++ + L FL S+ S +G+ G V G+M F+ +A + + PGI E+LI+
Sbjct: 114 MDLLEANLPFLASVGSVSPYIGLFGTVWGIMHSFRGLANVQNAILSAVAPGIAEALIATA 173
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
+GL +IP+ +AYN+ D + +++ E F EF+ IL QT G
Sbjct: 174 IGLFAAIPAVVAYNRAATDVDRLSIRFETFIEEFTNILQHQTAGR 218
>gi|49474662|ref|YP_032704.1| biopolymer transport exbB protein [Bartonella quintana str.
Toulouse]
gi|49240166|emb|CAF26630.1| Biopolymer transport exbB protein [Bartonella quintana str.
Toulouse]
Length = 280
Score = 191 bits (486), Expect = 7e-47, Method: Composition-based stats.
Identities = 56/256 (21%), Positives = 105/256 (41%), Gaps = 35/256 (13%)
Query: 6 LAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS 65
LA D+S F++F+ VK +I +L + S+ SW++ K V +R+ R QL
Sbjct: 15 LAAHDLSPFSIFIAADWVVKAVIVILLLASLASWTIAFVKIVEITLAKRRARRELQLVLK 74
Query: 66 GQSLETVCKSLKNHHNIGLAAI---------------FMSA------------------- 91
Q+L + SLK+ G+ + F++
Sbjct: 75 AQTLTRLAASLKDSKGPGVTFLKETLKEVYLSTQQVNFIATEDLSEKQGRQGAFSEETIP 134
Query: 92 MSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAV 151
E + + G+++RI ++ + + + + L ++ + VG+ V
Sbjct: 135 YEEIPRYGEITRDVNEGVKERIRSLLSRCLLANMRRVACGSAVLATIGAIAPFVGLFATV 194
Query: 152 LGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQM 210
G+M F IA + V PGI E+L++ +GL V+IP+ + YN + + +
Sbjct: 195 WGIMNSFIGIAESQITRLDVVAPGIAEALLATAVGLFVAIPAVVMYNSLMRALSSYRNDL 254
Query: 211 EGFANEFSAILSRQTE 226
A +LSR+ +
Sbjct: 255 GDIAAALERLLSRELD 270
>gi|253999469|ref|YP_003051532.1| MotA/TolQ/ExbB proton channel [Methylovorus sp. SIP3-4]
gi|313201498|ref|YP_004040156.1| mota/tolq/exbb proton channel [Methylovorus sp. MP688]
gi|253986148|gb|ACT51005.1| MotA/TolQ/ExbB proton channel [Methylovorus sp. SIP3-4]
gi|312440814|gb|ADQ84920.1| MotA/TolQ/ExbB proton channel [Methylovorus sp. MP688]
Length = 247
Score = 191 bits (485), Expect = 8e-47, Method: Composition-based stats.
Identities = 54/215 (25%), Positives = 93/215 (43%), Gaps = 2/215 (0%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
+ + A G+ + L + S+ SW +II K + + LR R + Q FW SL
Sbjct: 6 EFNSLAFITDGGVVSITVALCLLVMSVASWYLIIVKGIQSLRLRAASRNYSQRFWDASSL 65
Query: 70 ETVCKSLK-NHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
E + + LA + A ++ K + + R M I+ E +
Sbjct: 66 EVAIRENGVSTPMSRLANQAVEAAEHHQRHASKRLADACNQDEFVARSMRRVISDEGARL 125
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLC 187
L+ L S+ S VG+ G V G+ SI+ + + G + E+LI GL
Sbjct: 126 ENGLTILASVGSVSPFVGLFGTVWGIYHALASISMSGQATLDKVAGPVGEALIMTAFGLA 185
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
V+IP+ +AYN + ++ Q++ FAN+ +L+
Sbjct: 186 VAIPAVLAYNALVRSNRVLMAQLDSFANDLHVLLT 220
>gi|294670981|ref|ZP_06735837.1| hypothetical protein NEIELOOT_02687 [Neisseria elongata subsp.
glycolytica ATCC 29315]
gi|291307468|gb|EFE48711.1| hypothetical protein NEIELOOT_02687 [Neisseria elongata subsp.
glycolytica ATCC 29315]
Length = 237
Score = 191 bits (485), Expect = 8e-47, Method: Composition-based stats.
Identities = 38/223 (17%), Positives = 97/223 (43%), Gaps = 5/223 (2%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+ + +F Q + +L I S+ +W+V+I +++ ++ + W +S E
Sbjct: 1 MDLLHVFKQGDPVLIAAFLILVIMSLATWTVMIVRTIKLRRAKKANARVKDRIWGAKSWE 60
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSE---WKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + + + ++ + + A+ + ++ D S + + + + +
Sbjct: 61 DAIRIARENEDAPMSNMLLDAVKADEFFHRNQDTDLASGVPFSQYLLHQIHHNQGQIMRG 120
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGL 186
L+ L S+ S+ +G+ G V G+ +I ++ ++ G I E+L++ GL
Sbjct: 121 FEGGLTALASIGSSAPFIGLFGTVWGIYHALVNIGQSGQVSIAAVAGPIGEALVATAFGL 180
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA-ILSRQTEGN 228
+IP+ ++YN + +K + F ++ IL+++T
Sbjct: 181 FAAIPAVLSYNFLVRGNKTLQQDLHAFGHDLHVQILNKKTRSK 223
>gi|317153130|ref|YP_004121178.1| MotA/TolQ/ExbB proton channel [Desulfovibrio aespoeensis Aspo-2]
gi|316943381|gb|ADU62432.1| MotA/TolQ/ExbB proton channel [Desulfovibrio aespoeensis Aspo-2]
Length = 234
Score = 191 bits (485), Expect = 8e-47, Method: Composition-based stats.
Identities = 61/222 (27%), Positives = 106/222 (47%), Gaps = 4/222 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
+ D +F L LAVK ++ L S+ SW++I K R++ + F S
Sbjct: 4 LPDSDLFTLLAGATLAVKMVLLFLAAMSLWSWTIIFYKFFTIGEARKKVMLGYEAFTSAG 63
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGA---RSPIGIQDRIDRMMDVAIARE 124
L + K+L L+ + A+ E++ R + ++D + R++ I++E
Sbjct: 64 DLSSGLKALGAKEQSPLSRVSTLAVKEFRLLEKADVNRERKRLLVKDTLRRVLKQGISKE 123
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISIL 183
+ +T L FL + ++A +G+ G V G+M F SI S + ++ PGI E+LI+
Sbjct: 124 MRILTRNLPFLATCANAAPFIGLFGTVWGIMHSFHSIGLAQSAALATVAPGISEALIATA 183
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+GL V+IP++I YN F+ + M FA F R+
Sbjct: 184 IGLLVAIPATIFYNYFLGKLNEVESGMIDFAGAFLNRAEREI 225
>gi|292491864|ref|YP_003527303.1| tonB-system energizer ExbB [Nitrosococcus halophilus Nc4]
gi|291580459|gb|ADE14916.1| tonB-system energizer ExbB [Nitrosococcus halophilus Nc4]
Length = 311
Score = 191 bits (485), Expect = 8e-47, Method: Composition-based stats.
Identities = 51/220 (23%), Positives = 98/220 (44%), Gaps = 3/220 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
D+S + +F+ VK +I L SI++W++ + KS+ +R+ R + +
Sbjct: 73 PHDLSPWGMFLGADWVVKAVILGLVFASIVTWTIGLAKSLELGMGKRRLRGALERLGEVR 132
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+L KSL++ + + ++F + + GI++RI +
Sbjct: 133 TLGEGMKSLRDEES--IVSLFADVVEKELDFFADSIPEKEGIKERIATGLGRIEVAASRR 190
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
I+ L ++ S VG+ G V G+M F I+ + N+ V PGI E+L+ +GL
Sbjct: 191 ISRGTGILATIGSTAPFVGLFGTVWGIMNSFIGISEAQTTNLAVVAPGIAEALLVTAIGL 250
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ + YN F + + ++E +SR +
Sbjct: 251 IAAIPAVVIYNFFARSIAGYRALLADTSSEVLQWVSRDFD 290
>gi|107029103|ref|YP_626198.1| MotA/TolQ/ExbB proton channel [Burkholderia cenocepacia AU 1054]
gi|116689738|ref|YP_835361.1| MotA/TolQ/ExbB proton channel [Burkholderia cenocepacia HI2424]
gi|105898267|gb|ABF81225.1| outer membrane transport energization protein ExbB [Burkholderia
cenocepacia AU 1054]
gi|116647827|gb|ABK08468.1| outer membrane transport energization protein ExbB [Burkholderia
cenocepacia HI2424]
Length = 303
Score = 191 bits (485), Expect = 8e-47, Method: Composition-based stats.
Identities = 50/221 (22%), Positives = 91/221 (41%), Gaps = 11/221 (4%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YGL AL+ + ++ LL I S+ SW ++I K V + R+ + +
Sbjct: 74 NPYGLG-------ALWKNGDFVARFVLILLVIMSMGSWYIMISKFVEQLRANRRAKLADA 126
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
WS SL K L E + D+ + ID ++ +I
Sbjct: 127 QLWSAPSLAEGAKLLDEASPF---RFIAETAIEAGEHHDEALLEAVDRNTWIDVSVERSI 183
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLI 180
+ + L+FL ++ S VG+ G V G+ +I ++ + G + E+LI
Sbjct: 184 TNVSNRMQDGLAFLATVGSTAPFVGLFGTVWGIYHALTAIGIAGQASIDKVAGPVGEALI 243
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+GL V++P+ + YN + +K ++ F + +L
Sbjct: 244 MTAIGLAVAVPAVLGYNFLVRRNKSVMERVRNFGAQLHTVL 284
>gi|90418655|ref|ZP_01226566.1| biopolymer transport protein exbB [Aurantimonas manganoxydans
SI85-9A1]
gi|90336735|gb|EAS50440.1| biopolymer transport protein exbB [Aurantimonas manganoxydans
SI85-9A1]
Length = 289
Score = 191 bits (485), Expect = 9e-47, Method: Composition-based stats.
Identities = 54/220 (24%), Positives = 99/220 (45%), Gaps = 4/220 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
D+S +FM VK ++ L S+++W++ + K++ +R+ R + +
Sbjct: 57 PHDLSPMGMFMAADWVVKAVMIGLAFASLVTWTIGLSKAMELALAKRRARVGVRRLARAE 116
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+L + + +AA+ SA +E +S D S GI++R+ + A
Sbjct: 117 TLTEALTANRRRWRGPVAALAQSAEAERARSAD---LSDDGIKERVSVALSRIEAGAGRS 173
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
I+ L ++ S VG+ G V G+M F I+ + N+ V PGI E+L++ +GL
Sbjct: 174 ISRGTGILATIGSTAPFVGLFGTVWGIMNAFIGISQANTTNLAVVAPGIAEALLATAIGL 233
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ I YN F + + + LSR +
Sbjct: 234 VAAIPAVIVYNVFARSIAGYRAVLSDGSALVLQHLSRDLD 273
>gi|253687542|ref|YP_003016732.1| MotA/TolQ/ExbB proton channel [Pectobacterium carotovorum subsp.
carotovorum PC1]
gi|251754120|gb|ACT12196.1| MotA/TolQ/ExbB proton channel [Pectobacterium carotovorum subsp.
carotovorum PC1]
Length = 246
Score = 191 bits (485), Expect = 9e-47, Method: Composition-based stats.
Identities = 45/214 (21%), Positives = 89/214 (41%), Gaps = 3/214 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+ I + Q + + +L I S+LSW+V++ K+ +TL + + FW SL+
Sbjct: 4 LDIHHFWQQGDVVTHSVAIILLIMSLLSWTVMLFKARQLLTLNKSVQYSRHTFWQATSLQ 63
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCD--KGARSPIGIQDRIDRMMDVAIARELEEI 128
+ + + + K + + D + R + + ++
Sbjct: 64 ESVEKFGKQRFNPFRDLVIEGHALLKHPHKFSSTLGGHVDLSDWLVRGLSNTLDTNSGKL 123
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLC 187
L L S+ S +G+LG V G+ Q+I+ ++ + G + E+LI GL
Sbjct: 124 QSGLGTLASIGSTAPFIGLLGTVWGIFHALQTISTIGQPDLAQVAGPVGEALIMTAFGLF 183
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
V+IP+ + +N ++ M FA++ A L
Sbjct: 184 VAIPAVLGFNAINRRNRIVLHAMNRFAHDLHAYL 217
>gi|30248239|ref|NP_840309.1| MotA/TolQ/ExbB proton channel family protein [Nitrosomonas europaea
ATCC 19718]
gi|30180124|emb|CAD84126.1| MotA/TolQ/ExbB proton channel family [Nitrosomonas europaea ATCC
19718]
Length = 234
Score = 191 bits (485), Expect = 9e-47, Method: Composition-based stats.
Identities = 64/221 (28%), Positives = 103/221 (46%), Gaps = 5/221 (2%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
D+S F L L V+ ++ LL + S +SW I +K +Q EFE +FW G
Sbjct: 6 TQDLSFFHLVSGASLPVQLVMLLLLLASFVSWWFIFRKLFTLRQEIKQTDEFENIFWRGS 65
Query: 68 SLETVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
L + + + + IF + E+ K + I D M RE+
Sbjct: 66 DLNALYQRAAGARHAVGSMERIFEAGFREFTKY--QSGVDIGPIMDSTRGAMRAVYQREM 123
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV-SIPGIIESLISILL 184
+ + LSFL ++ S VG+ G V G+M F+ ++ + PGI E+LI+ +
Sbjct: 124 DRLESHLSFLATVGSVSPYVGLFGTVWGIMNAFRELSNVGQATIAHVAPGIAEALIATAM 183
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
GL +IP+ IAYN++ D+ + A + E F E S +L R+
Sbjct: 184 GLFAAIPAVIAYNRYASDTAQLATRYESFIEEVSNVLQRRV 224
>gi|192292333|ref|YP_001992938.1| tonB-system energizer ExbB [Rhodopseudomonas palustris TIE-1]
gi|192286082|gb|ACF02463.1| tonB-system energizer ExbB [Rhodopseudomonas palustris TIE-1]
Length = 303
Score = 191 bits (485), Expect = 9e-47, Method: Composition-based stats.
Identities = 56/221 (25%), Positives = 107/221 (48%), Gaps = 4/221 (1%)
Query: 7 AIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG 66
+ ++S + +F+ + VK ++ L I S+++W++ I K V R + R +
Sbjct: 73 GLSELSPWTMFLNADIIVKIVMIGLAISSVITWTIFIAKKVELGRARFRLRRSLKEIGES 132
Query: 67 QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
+SL +L + H++ L+ + +A+ E K S G S GI++R + E
Sbjct: 133 RSLAEAQMALGDKHSV-LSMLLAAALREAKLSA--GLSSDEGIKERAASSFSEYVRAEGR 189
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLG 185
+ + FL ++ + +G+ G V G+M F I+ + N+ V PGI E+L++ +G
Sbjct: 190 HMRRGMGFLATIGATAPFIGLFGTVWGIMNSFIGISKSQTTNLAVVAPGIAEALLATAIG 249
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
L +IP+ I YN F + K + + + +LSR +
Sbjct: 250 LVAAIPAVIIYNHFSREIKLYLELVARASGAAGRLLSRDLD 290
>gi|89255757|ref|YP_513119.1| TolQ protein [Francisella tularensis subsp. holarctica LVS]
gi|115314251|ref|YP_762974.1| TolQ protein [Francisella tularensis subsp. holarctica OSU18]
gi|118496962|ref|YP_898012.1| TolQ protein [Francisella tularensis subsp. novicida U112]
gi|156501720|ref|YP_001427785.1| TolQ protein [Francisella tularensis subsp. holarctica FTNF002-00]
gi|167009209|ref|ZP_02274140.1| TolQ protein [Francisella tularensis subsp. holarctica FSC200]
gi|194324191|ref|ZP_03057965.1| TolQ protein [Francisella tularensis subsp. novicida FTE]
gi|208780414|ref|ZP_03247755.1| TolQ protein [Francisella novicida FTG]
gi|224457027|ref|ZP_03665500.1| TolQ protein [Francisella tularensis subsp. tularensis MA00-2987]
gi|254369032|ref|ZP_04985045.1| hypothetical protein FTAG_00872 [Francisella tularensis subsp.
holarctica FSC022]
gi|254370435|ref|ZP_04986440.1| group A colicin translocation [Francisella tularensis subsp.
tularensis FSC033]
gi|254373806|ref|ZP_04989289.1| group A colicin translocation [Francisella novicida GA99-3548]
gi|89143588|emb|CAJ78771.1| TolQ protein [Francisella tularensis subsp. holarctica LVS]
gi|115129150|gb|ABI82337.1| TolQ protein [Francisella tularensis subsp. holarctica OSU18]
gi|118422868|gb|ABK89258.1| group A colicin translocation; tolQ protein [Francisella novicida
U112]
gi|151568678|gb|EDN34332.1| group A colicin translocation [Francisella tularensis subsp.
tularensis FSC033]
gi|151571527|gb|EDN37181.1| group A colicin translocation [Francisella novicida GA99-3548]
gi|156252323|gb|ABU60829.1| tol-pal system component, tolQ [Francisella tularensis subsp.
holarctica FTNF002-00]
gi|157121953|gb|EDO66123.1| hypothetical protein FTAG_00872 [Francisella tularensis subsp.
holarctica FSC022]
gi|194321638|gb|EDX19122.1| TolQ protein [Francisella tularensis subsp. novicida FTE]
gi|208743782|gb|EDZ90085.1| TolQ protein [Francisella novicida FTG]
gi|282159131|gb|ADA78522.1| TolQ protein [Francisella tularensis subsp. tularensis NE061598]
gi|328676436|gb|AEB27306.1| MotA/TolQ/ExbB proton channel family protein [Francisella cf.
novicida Fx1]
Length = 235
Score = 190 bits (484), Expect = 1e-46, Method: Composition-based stats.
Identities = 56/221 (25%), Positives = 108/221 (48%), Gaps = 3/221 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
IS+ L + V+ I+ L S+ SW+++++ + R + +F++LFW+G ++
Sbjct: 5 ISLVELVLHANFIVQLIMLALVAMSVYSWAIMLEVNNRVKKYRNEQVQFDKLFWAGHHIQ 64
Query: 71 TVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ H G + IF S + E+ D I + ++R + +AIA+E +E+
Sbjct: 65 KLYDYYLQHKENIFGKSIIFCSGLREFNNLKDTCMLRGDTILEGMERTVSIAIAQEAKEL 124
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
KL L ++ + +G++G V G+M F ++ G + V P I E+LI+ LGL
Sbjct: 125 DRKLPALATIGAVAPYIGLVGTVWGIMSSFNTLGGVEQATISVVAPHIAEALIATALGLF 184
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
V+IP+ I ++K E F ++ +L ++ +
Sbjct: 185 VAIPAVIGHSKLSNQVDDILSSYESFQDDLCILLLKEAHRD 225
>gi|330991176|ref|ZP_08315129.1| Biopolymer transport protein exbB [Gluconacetobacter sp. SXCC-1]
gi|329761762|gb|EGG78253.1| Biopolymer transport protein exbB [Gluconacetobacter sp. SXCC-1]
Length = 295
Score = 190 bits (484), Expect = 1e-46, Method: Composition-based stats.
Identities = 42/221 (19%), Positives = 90/221 (40%), Gaps = 11/221 (4%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YGL AL+ + ++ ++ + S+ +W ++I K + + + +E +
Sbjct: 72 NPYGLG-------ALWSNGDFIARTVLLIMVVMSVGTWYIMIIKFLEQARIFKDVKEVKA 124
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
FW + L I + + + + + I + + ++
Sbjct: 125 KFWPAADIRQGASQLDTA--SPFRYIADTGIKA-AEHHEGTMQETIDLPSWTALSLQRSV 181
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLI 180
+ L+FLG++ S VG+ G V G+ +I ++ + G + ESLI
Sbjct: 182 DFVQNRLQGGLAFLGTVGSTSPFVGLFGTVWGIYHALTAIGIAGQASIDKVAGPVGESLI 241
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+GL ++P+ + YN + +K ++ FA + +IL
Sbjct: 242 MTAIGLGTAVPAVLGYNMLVRRNKGALDEVRNFAADLQSIL 282
>gi|95929962|ref|ZP_01312702.1| MotA/TolQ/ExbB proton channel [Desulfuromonas acetoxidans DSM 684]
gi|95133931|gb|EAT15590.1| MotA/TolQ/ExbB proton channel [Desulfuromonas acetoxidans DSM 684]
Length = 222
Score = 190 bits (484), Expect = 1e-46, Method: Composition-based stats.
Identities = 50/191 (26%), Positives = 88/191 (46%), Gaps = 6/191 (3%)
Query: 38 SWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKK 97
SW++I K R+ +F FW+ + L+ V + +K + + L+++F E K
Sbjct: 26 SWTIIFYKFRTIQRATRESSQFIDFFWNKKRLDAVAQEIKQYSHSPLSSLFREGYQELLK 85
Query: 98 SC-----DKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVL 152
D + I R + A +E + + L+FL + S +G+ G V
Sbjct: 86 VQRIEKGDDSRGFADMGGENIARALRRASTQETHRLEKYLTFLATTGSTAPFIGLFGTVW 145
Query: 153 GMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
G+M F I S ++ V PGI E+L++ +GL +IP+ + YN F+ +M+
Sbjct: 146 GIMDSFHGIGQTGSASLAVVAPGISEALVATAIGLMAAIPAVVGYNHFLNKVNVLIGEMD 205
Query: 212 GFANEFSAILS 222
F+ EF I+
Sbjct: 206 NFSQEFLNIIE 216
>gi|163869099|ref|YP_001610335.1| biopolymer transport exbB protein [Bartonella tribocorum CIP
105476]
gi|161018782|emb|CAK02340.1| biopolymer transport exbB protein [Bartonella tribocorum CIP
105476]
Length = 291
Score = 190 bits (484), Expect = 1e-46, Method: Composition-based stats.
Identities = 57/267 (21%), Positives = 107/267 (40%), Gaps = 46/267 (17%)
Query: 6 LAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS 65
LA+ D S F++FM VK +I LL + S++SW++ K + +R+ R +L +
Sbjct: 15 LAVHDFSPFSMFMAADWVVKAVIILLLLASLVSWTIAFVKIIEITLAKRRVRHELRLVLN 74
Query: 66 GQSLETVCKSLKNHHNIG-------LAAIFMSAMSEWKKSCDKGARS------------- 105
Q+L + SLK G L +++S S + + S
Sbjct: 75 AQTLTRLAASLKESKGAGVFFLKEVLKEVYLSTQQVHFASPEGTSESSGERANTRKSVQT 134
Query: 106 -------------------------PIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSS 140
G+++R+ ++ + + + + L ++ +
Sbjct: 135 LEDILFYEENDQYGGASRDVYVRDVHEGLKERVHSLLSRCLLAAIRRVAYGNAVLATIGA 194
Query: 141 AGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKF 199
VG+ V G+M F IA + + V PGI E+L + +GL V+IP+ + YN
Sbjct: 195 IAPFVGLFATVWGIMNSFIGIAQSQTTRLDVVAPGIAEALFATAMGLFVAIPAVVMYNSL 254
Query: 200 IEDSKKFAMQMEGFANEFSAILSRQTE 226
+ + + A +LSR+ +
Sbjct: 255 MRALNGYRSDLGDIAAALERLLSRELD 281
>gi|295700974|ref|YP_003608867.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. CCGE1002]
gi|295440187|gb|ADG19356.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. CCGE1002]
Length = 302
Score = 190 bits (484), Expect = 1e-46, Method: Composition-based stats.
Identities = 48/221 (21%), Positives = 91/221 (41%), Gaps = 11/221 (4%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YGL AL+ + ++ LL I S+ SW +++ K R+ + ++
Sbjct: 72 NPYGLG-------ALWKNGDFVARFVLLLLVIMSMGSWYIMVTKFFEQFRANRRAKHADE 124
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
WS SL + L E + D+ + ID ++ AI
Sbjct: 125 QLWSAPSLTEGAQQLDESSPF---RFIAETAIEAGQHHDEALLEAVDRNTWIDVSVERAI 181
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLI 180
+ + L+FL ++ S +G+ G V G+ +I ++ + G + E+LI
Sbjct: 182 TNVSNRMQDGLAFLATVGSTAPFIGLFGTVWGIYHALTAIGIAGQASIDKVAGPVGEALI 241
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+GL V++P+ + YN + +K ++ F + A+L
Sbjct: 242 MTAIGLGVAVPAVLGYNFLVRRNKSVMERVRAFGAQLHAVL 282
>gi|296159357|ref|ZP_06842182.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. Ch1-1]
gi|295890341|gb|EFG70134.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. Ch1-1]
Length = 301
Score = 190 bits (484), Expect = 1e-46, Method: Composition-based stats.
Identities = 48/221 (21%), Positives = 92/221 (41%), Gaps = 11/221 (4%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YGL AL+ + ++ LL + S+ SW +++ K V R+ + ++
Sbjct: 72 NPYGLG-------ALWKNGDFVARFVLILLVLMSMGSWYIMVTKFVEQFRANRRAKSADE 124
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
W+ SL K L E + ++ + ID ++ AI
Sbjct: 125 QLWTAPSLVEGAKLLDEASPF---RFIAETAIEAGEHHEEALLEAVDRNTWIDTSVERAI 181
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLI 180
+ + L+FLG++ S VG+ G V G+ +I ++ + G + E+LI
Sbjct: 182 TNVSNRLQDGLAFLGTVGSTAPFVGLFGTVWGIYHALTAIGIAGQASIDKVAGPVGEALI 241
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+GL V++P+ + YN + +K ++ F + +L
Sbjct: 242 MTAIGLAVAVPAVLGYNFLVRRNKSVMERVRAFGAQLHTVL 282
>gi|153838036|ref|ZP_01990703.1| protein TolQ [Vibrio parahaemolyticus AQ3810]
gi|149748570|gb|EDM59429.1| protein TolQ [Vibrio parahaemolyticus AQ3810]
Length = 186
Score = 190 bits (484), Expect = 1e-46, Method: Composition-based stats.
Identities = 55/175 (31%), Positives = 88/175 (50%), Gaps = 3/175 (1%)
Query: 54 RQFREFEQLFWSGQSLETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQD 111
+ +FE FWSG L + + +K + G IF + +E+ + A SP I +
Sbjct: 2 KNAEQFEDKFWSGTDLSQLYQKVKGRKDEIAGTEEIFYAGFTEFARLRKSNANSPAYIME 61
Query: 112 RIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-V 170
R M VA+ARE++E+ L FL ++ S +G+ G V G+M F ++ + +
Sbjct: 62 GTGRAMRVAVAREVDELETSLPFLATVGSISPYIGLFGTVWGIMHAFIALGEVKQATLSM 121
Query: 171 SIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
PGI E+LI+ +GL +IP+ +AYN+ K F+ EF +IL RQ
Sbjct: 122 VAPGIAEALIATAMGLFAAIPAVMAYNRLSNKVSKLEHTYATFSEEFHSILHRQA 176
>gi|209515327|ref|ZP_03264194.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. H160]
gi|209504308|gb|EEA04297.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. H160]
Length = 302
Score = 190 bits (484), Expect = 1e-46, Method: Composition-based stats.
Identities = 48/221 (21%), Positives = 91/221 (41%), Gaps = 11/221 (4%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YGL AL+ + ++ LL I S+ SW +++ K R+ + ++
Sbjct: 72 NPYGLG-------ALWKNGDFVARFVLLLLVIMSMGSWYIMVTKFFEQFRASRRAKHADE 124
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
WS SL + L E + D+ + ID ++ AI
Sbjct: 125 QLWSAPSLTEGAQQLDESSPF---RFIAETAIEAGQHHDEALLEAVDRNTWIDVSVERAI 181
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLI 180
+ + L+FL ++ S +G+ G V G+ +I ++ + G + E+LI
Sbjct: 182 TNVSNRMQDGLAFLATVGSTAPFIGLFGTVWGIYHALTAIGIAGQASIDKVAGPVGEALI 241
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+GL V++P+ + YN + +K ++ F + A+L
Sbjct: 242 MTAIGLGVAVPAVLGYNFLVRRNKSVMERVRAFGAQLHAVL 282
>gi|206560151|ref|YP_002230915.1| putative iron-transport protein [Burkholderia cenocepacia J2315]
gi|198036192|emb|CAR52088.1| putative iron-transport protein [Burkholderia cenocepacia J2315]
Length = 287
Score = 190 bits (484), Expect = 1e-46, Method: Composition-based stats.
Identities = 50/221 (22%), Positives = 91/221 (41%), Gaps = 11/221 (4%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YGL AL+ + ++ LL I S+ SW ++I K V + R+ + +
Sbjct: 58 NPYGLG-------ALWKNGDFVARFVLILLVIMSMGSWYIMITKFVEQLRANRRAKLADA 110
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
WS SL K L E + D+ + ID ++ +I
Sbjct: 111 QLWSAPSLAEGAKLLDEASPF---RFIAETAIEAGEHHDEALLEAVDRNTWIDVSVERSI 167
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLI 180
+ + L+FL ++ S VG+ G V G+ +I ++ + G + E+LI
Sbjct: 168 TNVSNRMQDGLAFLATVGSTAPFVGLFGTVWGIYHALTAIGIAGQASIDKVAGPVGEALI 227
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+GL V++P+ + YN + +K ++ F + +L
Sbjct: 228 MTAIGLAVAVPAVLGYNFLVRRNKSVMERVRNFGAQLHTVL 268
>gi|148252869|ref|YP_001237454.1| putative biopolymer transport protein [Bradyrhizobium sp. BTAi1]
gi|146405042|gb|ABQ33548.1| outer membrane transport energization protein ExbB [Bradyrhizobium
sp. BTAi1]
Length = 274
Score = 190 bits (484), Expect = 1e-46, Method: Composition-based stats.
Identities = 55/224 (24%), Positives = 105/224 (46%), Gaps = 5/224 (2%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
D+S +++F+ + VK ++ L + S+ +W+V I K++ F LRR+ + +
Sbjct: 30 PHDLSPWSMFLAADILVKAVMMGLALASLATWTVFIAKTIEFAMLRRKLKRALHKVADVR 89
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
L +L + ++ L + +AM E + S + + G+ +R + E
Sbjct: 90 WLSEAKLALGSRESV-LTTMIDAAMHEIRMSSELPSH---GVNERAASSFAEIVRAEGRR 145
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
+ L ++ S VG+ G V G+M F I+ + N+ V PGI E+L++ +GL
Sbjct: 146 CRTGMGLLATIGSISPFVGLFGTVWGIMNSFIGISKSQTTNLAVVAPGIAEALLATAIGL 205
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
+IP+ I YN F +K + + + + +LSR + S
Sbjct: 206 VAAIPAVIIYNHFTRVTKGYMELVSRSSGATARMLSRDLDRGQS 249
>gi|110180256|gb|ABG54367.1| ExbB [Klebsiella pneumoniae]
Length = 200
Score = 190 bits (484), Expect = 1e-46, Method: Composition-based stats.
Identities = 47/198 (23%), Positives = 92/198 (46%), Gaps = 4/198 (2%)
Query: 6 LAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS 65
L D+S++ ++ + VK ++ L + S+++W++ K + +R+ + +Q
Sbjct: 5 LMQADLSVWGMYHHADIVVKVVMIGLILASVVTWAIFFGKGAEILASKRRLKREQQQLAE 64
Query: 66 GQSLETVCKSLKNHHNIGL-AAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARE 124
+SL+ L + A +E + S GA GI++R ++ +A
Sbjct: 65 ARSLDQASDIASAFEAKSLTTQLINEAQNELELSA--GAEDNEGIKERTGFRLERRVAAV 122
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISIL 183
+ +L ++ + VG+ G V G+M F IA + N+ V PGI E+L++
Sbjct: 123 GRHMGRGNGYLATIGAISPFVGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGIAEALLATA 182
Query: 184 LGLCVSIPSSIAYNKFIE 201
+GL +IP+ + YN F
Sbjct: 183 IGLFAAIPAVVIYNIFAR 200
>gi|15595395|ref|NP_248889.1| transport protein ExbB [Pseudomonas aeruginosa PAO1]
gi|107099188|ref|ZP_01363106.1| hypothetical protein PaerPA_01000198 [Pseudomonas aeruginosa PACS2]
gi|116053917|ref|YP_788355.1| transport protein ExbB [Pseudomonas aeruginosa UCBPP-PA14]
gi|152985469|ref|YP_001345676.1| transport protein ExbB [Pseudomonas aeruginosa PA7]
gi|218888943|ref|YP_002437807.1| transport protein ExbB [Pseudomonas aeruginosa LESB58]
gi|254237565|ref|ZP_04930888.1| transport protein ExbB [Pseudomonas aeruginosa C3719]
gi|254243305|ref|ZP_04936627.1| transport protein ExbB [Pseudomonas aeruginosa 2192]
gi|296386686|ref|ZP_06876185.1| transport protein ExbB [Pseudomonas aeruginosa PAb1]
gi|313112225|ref|ZP_07797999.1| transport protein ExbB [Pseudomonas aeruginosa 39016]
gi|6118339|gb|AAF04083.1|AF190125_2 ExbB [Pseudomonas aeruginosa]
gi|9946033|gb|AAG03587.1|AE004458_2 transport protein ExbB [Pseudomonas aeruginosa PAO1]
gi|115589138|gb|ABJ15153.1| transport protein ExbB [Pseudomonas aeruginosa UCBPP-PA14]
gi|126169496|gb|EAZ55007.1| transport protein ExbB [Pseudomonas aeruginosa C3719]
gi|126196683|gb|EAZ60746.1| transport protein ExbB [Pseudomonas aeruginosa 2192]
gi|150960627|gb|ABR82652.1| transport protein ExbB [Pseudomonas aeruginosa PA7]
gi|218769166|emb|CAW24926.1| transport protein ExbB [Pseudomonas aeruginosa LESB58]
gi|310884501|gb|EFQ43095.1| transport protein ExbB [Pseudomonas aeruginosa 39016]
Length = 239
Score = 190 bits (484), Expect = 1e-46, Method: Composition-based stats.
Identities = 54/201 (26%), Positives = 105/201 (52%), Gaps = 4/201 (1%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLA 85
+I LL FS+++W + + K V F +RQ R+F++ FWS SL++ + ++ G A
Sbjct: 14 AVIWLLVGFSVVTWGLALVKGVQFARQKRQDRQFQKQFWSATSLDSAGEQAQDKQGAG-A 72
Query: 86 AIFMSAMSEWK--KSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
+ + + + + I QDR++R + I RE + L+ L S+ S
Sbjct: 73 RVAQAGFAAIQVQDNGQPDLAQSINHQDRLERALRQQIQRERRSLESGLAVLASIGSTSP 132
Query: 144 LVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIPSSIAYNKFIED 202
+G+ G V G+M + I+ S ++ ++ G I +LI+ +G+ V++P+ + YN F+
Sbjct: 133 FIGLFGTVWGIMEALKGISAAGSASLETVAGPIGSALIATGVGIAVAVPAVLVYNYFLRR 192
Query: 203 SKKFAMQMEGFANEFSAILSR 223
K A ++ FA++F ++ +
Sbjct: 193 LKLTAADLDDFAHDFYSLAQK 213
>gi|330819371|ref|YP_004348233.1| MotA/TolQ/ExbB proton channel [Burkholderia gladioli BSR3]
gi|327371366|gb|AEA62721.1| MotA/TolQ/ExbB proton channel [Burkholderia gladioli BSR3]
Length = 244
Score = 190 bits (483), Expect = 1e-46, Method: Composition-based stats.
Identities = 51/221 (23%), Positives = 96/221 (43%), Gaps = 10/221 (4%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
M YG+A ++ Q + I L S++SW VI+ K + L + +
Sbjct: 1 MEQYGIA-------NVWQQGDFITRFIFVFLLGMSVVSWFVILTKGLANRRLETMGKRAQ 53
Query: 61 QLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGA--RSPIGIQDRIDRMMD 118
FWS S + K+L + A+ ++ ++ GA + + + + R +
Sbjct: 54 TRFWSTPSFDEGIKALGEGADNPYRAMALAGREANEQQAGGGASLQGSLSASEWVARGLR 113
Query: 119 VAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIE 177
A E+ + L+ LGS+ S VG+ G V G+ +I ++ + G + E
Sbjct: 114 NAFDDEVARLQNGLAVLGSIGSTAPFVGLFGTVWGIYHALMAIGASGQASLDHVAGPVGE 173
Query: 178 SLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFS 218
SLI +GL V+IP+ + +N +K+ + ++ F +E
Sbjct: 174 SLIMTAIGLFVAIPAVLGFNYVNRGNKRVSHRLNRFVHELH 214
>gi|146343118|ref|YP_001208166.1| biopolymer transport protein [Bradyrhizobium sp. ORS278]
gi|146195924|emb|CAL79951.1| biopolymer transport protein [Bradyrhizobium sp. ORS278]
Length = 325
Score = 190 bits (482), Expect = 2e-46, Method: Composition-based stats.
Identities = 58/224 (25%), Positives = 106/224 (47%), Gaps = 5/224 (2%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
D+S +++F+ + VK ++ L + S+ +W+V I K+V F LRR+ R + +
Sbjct: 81 PHDLSPWSMFLAADILVKSVMMGLALASLATWTVFIAKTVEFAILRRKLRSALRKVDDVR 140
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
L +L + ++ L + +AM E + S + P G+ +R + E
Sbjct: 141 WLSEAKLALGSKQSV-LTVLIDAAMHEIRMSSELP---PHGVNERAASSFAEIVRAEGRR 196
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
+ L ++ S VG+ G V G+M F I+ + N+ V PGI E+L++ +GL
Sbjct: 197 CRTGMGLLATIGSISPFVGLFGTVWGIMNSFIGISKSQTTNLAVVAPGIAEALLATAIGL 256
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
+IP+ I YN F +K + + + + +LSR + S
Sbjct: 257 VAAIPAVIIYNHFTRVTKGYMELVNRSSGATARMLSRDLDRGQS 300
>gi|15965264|ref|NP_385617.1| biopolymer transport transmembrane protein [Sinorhizobium meliloti
1021]
gi|15074444|emb|CAC46090.1| Probable biopolymer transport transmembrane protein [Sinorhizobium
meliloti 1021]
Length = 328
Score = 190 bits (482), Expect = 2e-46, Method: Composition-based stats.
Identities = 49/221 (22%), Positives = 103/221 (46%), Gaps = 3/221 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
D+S +F+ + VK ++ L + S+ +W++ + K++ I + + + S
Sbjct: 83 PHDLSPVGMFLAADIVVKAVMVALALASVATWAIFLVKTLELIYAKSRLKRAVAALVSAN 142
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSP-IGIQDRIDRMMDVAIARELE 126
L V L+ + + +A+ E +S +P +G+++R+ ++ R +
Sbjct: 143 GLAEVQSKLERRAGVAGE-MVAAAIDEMTRSEAVLDLAPAVGVKERVSSLLTRIEVRAGK 201
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLG 185
++ L S+ S G VG+ G V G+M F I+ + N+ + PGI E+L++ +G
Sbjct: 202 RMSAGTGILASIGSVGPFVGLFGTVWGIMNSFIGISKAQTTNLAIVAPGIAEALLATAIG 261
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
L +IP+ + YN F + + + A ++SR +
Sbjct: 262 LVAAIPAVVIYNYFARSVGGYKLILADAAAAVERLVSRDLD 302
>gi|307317028|ref|ZP_07596469.1| tonB-system energizer ExbB [Sinorhizobium meliloti AK83]
gi|306897116|gb|EFN27861.1| tonB-system energizer ExbB [Sinorhizobium meliloti AK83]
Length = 328
Score = 190 bits (482), Expect = 2e-46, Method: Composition-based stats.
Identities = 49/221 (22%), Positives = 103/221 (46%), Gaps = 3/221 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
D+S +F+ + VK ++ L + S+ +W++ + K++ I + + + S
Sbjct: 83 PHDLSPVGMFLAADIVVKAVMVALALASVATWAIFLVKTLELIYAKSRLKRAVAALVSAN 142
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSP-IGIQDRIDRMMDVAIARELE 126
L V L+ + + +A+ E +S +P +G+++R+ ++ R +
Sbjct: 143 GLAEVQPKLERRAGVAGE-MVAAAIDEMTRSEAVLDLAPAVGVKERVSSLLTRIEVRAGK 201
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLG 185
++ L S+ S G VG+ G V G+M F I+ + N+ + PGI E+L++ +G
Sbjct: 202 RMSAGTGILASIGSVGPFVGLFGTVWGIMNSFIGISKAQTTNLAIVAPGIAEALLATAIG 261
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
L +IP+ + YN F + + + A ++SR +
Sbjct: 262 LVAAIPAVVIYNYFARSVGGYKLILADAAAAVERLVSRDLD 302
>gi|134293632|ref|YP_001117368.1| MotA/TolQ/ExbB proton channel [Burkholderia vietnamiensis G4]
gi|134136789|gb|ABO57903.1| outer membrane transport energization protein ExbB [Burkholderia
vietnamiensis G4]
Length = 301
Score = 190 bits (482), Expect = 2e-46, Method: Composition-based stats.
Identities = 48/221 (21%), Positives = 91/221 (41%), Gaps = 11/221 (4%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YGL AL+ + ++ LL I S+ SW +++ K V + R+ + +
Sbjct: 72 NPYGLG-------ALWKNGDFVARFVLILLVIMSMGSWYIMVTKFVEQLRANRRAKLADA 124
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
WS SL K L E + ++ + ID ++ +I
Sbjct: 125 QLWSAPSLAEGAKLLDEASPF---RFIAETAIEAGEHHEEALLEAVDRNTWIDVSVERSI 181
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLI 180
+ + L+FL ++ S VG+ G V G+ +I ++ + G + E+LI
Sbjct: 182 TNVSNRMQDGLAFLATVGSTAPFVGLFGTVWGIYHALTAIGIAGQASIDKVAGPVGEALI 241
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+GL V++P+ + YN + +K ++ F + +L
Sbjct: 242 MTAIGLAVAVPAVLGYNFLVRRNKSVMERVRNFGAQLHTVL 282
>gi|75674900|ref|YP_317321.1| MotA/TolQ/ExbB proton channel [Nitrobacter winogradskyi Nb-255]
gi|74419770|gb|ABA03969.1| outer membrane transport energization protein ExbB [Nitrobacter
winogradskyi Nb-255]
Length = 400
Score = 190 bits (482), Expect = 2e-46, Method: Composition-based stats.
Identities = 56/222 (25%), Positives = 101/222 (45%), Gaps = 6/222 (2%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
D+S + +FMQ + VK ++ L S+++W+V + K + RR+ + +
Sbjct: 161 PQDLSPWGMFMQADIVVKAVMIGLAFASLVTWTVWLAKGIELAASRRRAQSCVRKLERAD 220
Query: 68 SLETVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
SL+ + +A + +A E ++S G S GI++R+ + A+
Sbjct: 221 SLDAARSEIAEGWTCEGTVADLMGAAERELQRS---GDLSSEGIKERLAIALSRIEAKAG 277
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILL 184
+I L ++ + VG+ G V G+M F I+ + N+ V PGI E+L++ L
Sbjct: 278 RDIARGTGLLATIGATAPFVGLFGTVWGIMNAFIGISQTKTTNLAVVAPGIAEALLATAL 337
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
GL +IP+ I YN F + + + E +SR E
Sbjct: 338 GLVAAIPAVIIYNVFARALSSYRALLSDASGEIIQHISRDLE 379
>gi|56707946|ref|YP_169842.1| TolQ protein [Francisella tularensis subsp. tularensis SCHU S4]
gi|110670417|ref|YP_666974.1| TolQ protein [Francisella tularensis subsp. tularensis FSC198]
gi|134302261|ref|YP_001122230.1| TolQ protein [Francisella tularensis subsp. tularensis WY96-3418]
gi|254874750|ref|ZP_05247460.1| tolQ protein [Francisella tularensis subsp. tularensis MA00-2987]
gi|56604438|emb|CAG45470.1| TolQ protein [Francisella tularensis subsp. tularensis SCHU S4]
gi|110320750|emb|CAL08853.1| TolQ protein [Francisella tularensis subsp. tularensis FSC198]
gi|134050038|gb|ABO47109.1| protein TolQ [Francisella tularensis subsp. tularensis WY96-3418]
gi|254840749|gb|EET19185.1| tolQ protein [Francisella tularensis subsp. tularensis MA00-2987]
Length = 239
Score = 190 bits (482), Expect = 2e-46, Method: Composition-based stats.
Identities = 56/221 (25%), Positives = 108/221 (48%), Gaps = 3/221 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
IS+ L + V+ I+ L S+ SW+++++ + R + +F++LFW+G ++
Sbjct: 9 ISLVELVLHANFIVQLIMLALVAMSVYSWAIMLEVNNRVKKYRNEQVQFDKLFWAGHHIQ 68
Query: 71 TVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ H G + IF S + E+ D I + ++R + +AIA+E +E+
Sbjct: 69 KLYDYYLQHKENIFGKSIIFCSGLREFNNLKDTCMLRGDTILEGMERTVSIAIAQEAKEL 128
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
KL L ++ + +G++G V G+M F ++ G + V P I E+LI+ LGL
Sbjct: 129 DRKLPALATIGAVAPYIGLVGTVWGIMSSFNTLGGVEQATISVVAPHIAEALIATALGLF 188
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
V+IP+ I ++K E F ++ +L ++ +
Sbjct: 189 VAIPAVIGHSKLSNQVDDILSSYESFQDDLCILLLKEAHRD 229
>gi|254245397|ref|ZP_04938718.1| Biopolymer transport protein [Burkholderia cenocepacia PC184]
gi|124870173|gb|EAY61889.1| Biopolymer transport protein [Burkholderia cenocepacia PC184]
Length = 301
Score = 190 bits (482), Expect = 2e-46, Method: Composition-based stats.
Identities = 50/221 (22%), Positives = 91/221 (41%), Gaps = 11/221 (4%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YGL AL+ + ++ LL I S+ SW ++I K V + R+ + +
Sbjct: 72 NPYGLG-------ALWKNGDFVARFVLILLVIMSMGSWYIMISKFVEQLRANRRAKLADA 124
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
WS SL K L E + D+ + ID ++ +I
Sbjct: 125 QLWSAPSLAEGAKLLDEASPF---RFIAETAIEAGEHHDEALLEAVDRNTWIDVSVERSI 181
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLI 180
+ + L+FL ++ S VG+ G V G+ +I ++ + G + E+LI
Sbjct: 182 TNVSNRMQDGLAFLATVGSTAPFVGLFGTVWGIYHALTAIGIAGQASIDKVAGPVGEALI 241
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+GL V++P+ + YN + +K ++ F + +L
Sbjct: 242 MTAIGLAVAVPAVLGYNFLVRRNKSVMERVRNFGAQLHTVL 282
>gi|237748567|ref|ZP_04579047.1| MotA/TolQ/ExbB proton channel family protein [Oxalobacter
formigenes OXCC13]
gi|229379929|gb|EEO30020.1| MotA/TolQ/ExbB proton channel family protein [Oxalobacter
formigenes OXCC13]
Length = 249
Score = 190 bits (482), Expect = 2e-46, Method: Composition-based stats.
Identities = 50/218 (22%), Positives = 93/218 (42%), Gaps = 5/218 (2%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
+I Q K I+ +L SI+SW++II K + ++ +F FW+ SL
Sbjct: 7 NIGFSHFIAQSDFLGKTILAILIGMSIVSWTLIIIKGIAGWRRKQYSNQFLHFFWNASSL 66
Query: 70 ETVCKSLKNH----HNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
+TV ++ H L + A Q+ + R M + + +
Sbjct: 67 DTVRHEIQTHGIRCPFSHLTSHAQHAQEHHVHYGAAKLSEAGTQQEFVIRTMRMVMDEDA 126
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILL 184
+ L+ L ++ S +G+ G V G+ +I+ + + + G + E+LI +
Sbjct: 127 ARLENGLTVLATIGSTAPFIGLFGTVWGIYNALINISASGAGTLDKVAGPVGEALIMTGI 186
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
GL V+IP+ I YN + + +++ FANE L+
Sbjct: 187 GLAVAIPAVIGYNWLVRSNNVLMSKLDTFANELLTFLT 224
>gi|154250831|ref|YP_001411655.1| TonB-system energizer ExbB type-1 [Parvibaculum lavamentivorans
DS-1]
gi|154154781|gb|ABS61998.1| TonB-system energizer ExbB type-1 [Parvibaculum lavamentivorans
DS-1]
Length = 309
Score = 190 bits (482), Expect = 2e-46, Method: Composition-based stats.
Identities = 51/218 (23%), Positives = 100/218 (45%), Gaps = 4/218 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S + +F+ + VK ++ L SI++W++ + K+ R + + + ++L
Sbjct: 83 DLSPWGMFLAADIVVKAVMIGLVFASIVTWTIWLAKNTEIARARSRAKSGFAALAASKTL 142
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+ + L++ + + +A+ E + S A G+++RI A EI
Sbjct: 143 DEAGEKLRSAKG-PVQQLAQAAIHEMQLSG--TAPDKEGVKERIAWRFQRIEANTAREIG 199
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCV 188
L ++ + VG+ G V G+M F IA + N+ V PGI E+L++ LGL
Sbjct: 200 IGTGVLATIGATAPFVGLFGTVWGIMNSFIGIAHTQTTNLAVVAPGIAEALLATGLGLVA 259
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ + YN F + + + E ++SR +
Sbjct: 260 AIPAVVIYNSFSRAIAGYRAIVADSSAELLRLVSRDLD 297
>gi|307309287|ref|ZP_07588955.1| tonB-system energizer ExbB [Sinorhizobium meliloti BL225C]
gi|306900288|gb|EFN30905.1| tonB-system energizer ExbB [Sinorhizobium meliloti BL225C]
Length = 328
Score = 189 bits (481), Expect = 2e-46, Method: Composition-based stats.
Identities = 49/221 (22%), Positives = 103/221 (46%), Gaps = 3/221 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
D+S +F+ + VK ++ L + S+ +W++ + K++ I + + + S
Sbjct: 83 PHDLSPVGMFLAADIVVKAVMVALALASVATWAIFLVKTLELIYAKSRLKRAVAALVSAN 142
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSP-IGIQDRIDRMMDVAIARELE 126
L V L+ + + +A+ E +S +P +G+++R+ ++ R +
Sbjct: 143 GLAEVQSKLERRAGVAGE-MVAAAIDEMTRSEAVLDLAPAVGVKERVSSLLTRIEVRAGK 201
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLG 185
++ L S+ S G VG+ G V G+M F I+ + N+ + PGI E+L++ +G
Sbjct: 202 RMSAGTGILASIGSVGPFVGLFGTVWGIMNSFIGISKAQTTNLAIVAPGIAEALLATAIG 261
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
L +IP+ + YN F + + + A ++SR +
Sbjct: 262 LVAAIPAVVIYNYFARSVGGYKLILADAAAAVERLVSRDLD 302
>gi|187923438|ref|YP_001895080.1| MotA/TolQ/ExbB proton channel [Burkholderia phytofirmans PsJN]
gi|187714632|gb|ACD15856.1| MotA/TolQ/ExbB proton channel [Burkholderia phytofirmans PsJN]
Length = 301
Score = 189 bits (481), Expect = 2e-46, Method: Composition-based stats.
Identities = 50/221 (22%), Positives = 93/221 (42%), Gaps = 11/221 (4%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YGL+ AL+ + ++ LL + S+ SW ++I K V R+ + ++
Sbjct: 72 NPYGLS-------ALWNNGDFVARFVLILLVLMSMGSWYIMITKFVEQFRANRRAKSADE 124
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
W+ SL K L E + D+ + ID ++ AI
Sbjct: 125 QLWTAPSLVEGAKLLDETSPF---RFIAETAIEAGEHHDEALLEAVDRNTWIDTSVERAI 181
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLI 180
+ + L+FLG++ S VG+ G V G+ +I ++ + G + E+LI
Sbjct: 182 TNVSNRLQDGLAFLGTVGSTAPFVGLFGTVWGIYHALTAIGIAGQASIDKVAGPVGEALI 241
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+GL V++P+ + YN + +K ++ F + +L
Sbjct: 242 MTAIGLAVAVPAVLGYNFLVRRNKSVMERVRAFGAQLHTVL 282
>gi|150396365|ref|YP_001326832.1| TonB-system energizer ExbB type-1 [Sinorhizobium medicae WSM419]
gi|150027880|gb|ABR59997.1| TonB-system energizer ExbB type-1 [Sinorhizobium medicae WSM419]
Length = 325
Score = 189 bits (481), Expect = 2e-46, Method: Composition-based stats.
Identities = 48/221 (21%), Positives = 100/221 (45%), Gaps = 3/221 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
D+S +F+ + VK ++ L + S+ +W++ I K++ + + + S
Sbjct: 81 PHDLSPVGMFLAADIVVKAVMIALALASVATWAIFIVKTLELAYAKSRLKRAVANLVSAN 140
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSP-IGIQDRIDRMMDVAIARELE 126
L V L+ + + +A+ E +S +P G+++R+ ++ R +
Sbjct: 141 GLAEVHSKLERRSGVA-GNMVTAAIDEMTRSEAVLDLTPSAGVKERVSSLLTRIEVRAGK 199
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLG 185
++ L S+ S G VG+ G V G+M F I+ + N+ + PGI E+L++ +G
Sbjct: 200 RMSAGTGILASIGSVGPFVGLFGTVWGIMNSFIGISKAQTTNLAIVAPGIAEALLATAIG 259
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
L +IP+ + YN F + + + ++SR +
Sbjct: 260 LVAAIPAVVIYNYFARSVGGYKLILADAGAAVERLVSRDLD 300
>gi|317493081|ref|ZP_07951505.1| tonB-system energizer ExbB [Enterobacteriaceae bacterium 9_2_54FAA]
gi|316919203|gb|EFV40538.1| tonB-system energizer ExbB [Enterobacteriaceae bacterium 9_2_54FAA]
Length = 302
Score = 189 bits (481), Expect = 2e-46, Method: Composition-based stats.
Identities = 52/214 (24%), Positives = 106/214 (49%), Gaps = 4/214 (1%)
Query: 6 LAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS 65
++ +D+SIF ++ Q + VK ++ L + S+++W+++ K + + +R+ ++ +L +
Sbjct: 73 ISSLDLSIFGMYQQADIVVKSVMIGLLVISVITWTILFAKGIALLRAKRKLQQEYRLLFP 132
Query: 66 GQSLETVCKSLKNHHNIGL-AAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARE 124
S T C+ ++ + AA+ A E K GI+DR + +D +A
Sbjct: 133 SLSFTTACELSQSFEKDSISAALLNDAQDE--KQLSAQMLDLNGIKDRANFRLDRRVAAY 190
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISIL 183
+ + +L ++ + +G+ G V G+M F IA + N+ V PGI E+L++
Sbjct: 191 GRSLAKGNGYLATIGAVAPFIGLFGTVWGIMNSFIGIAHSQTTNLAVVAPGIAEALLATA 250
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEF 217
+GL +IP+ + YN F + Q+ A +
Sbjct: 251 MGLIAAIPAVVIYNLFNRLIGEHRAQVGDAAAQV 284
>gi|126642626|ref|YP_001085610.1| tolerance to group A colicins single-stranded DNA filamentous phage
[Acinetobacter baumannii ATCC 17978]
Length = 207
Score = 189 bits (481), Expect = 2e-46, Method: Composition-based stats.
Identities = 60/203 (29%), Positives = 106/203 (52%), Gaps = 3/203 (1%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLK-NHHNIGLAA 86
+ +L + SI SW +I + +++ R+ F+++FWSG L T+ + + N GL
Sbjct: 1 MLILLLASIFSWYLIAKLHMSYKKARQDDEHFQKMFWSGAELNTLYNNAQLNSKRSGLED 60
Query: 87 IFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVG 146
IF +SE+ K + A + I + +R++ V ++R+ + L L S+ S +G
Sbjct: 61 IFYQGLSEFFKLKKRQAPTSQMI-EGTERILRVGLSRDQGSLEYGLGTLASIGSVAPYIG 119
Query: 147 ILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCVSIPSSIAYNKFIEDSKK 205
+ G V G+M F +A + ++ PGI E+LI+ +GL +IP+ +A+N F S+
Sbjct: 120 LFGTVWGIMNAFIGLAAVDQVTLATVAPGIAEALIATAIGLFAAIPAVLAFNHFTAKSES 179
Query: 206 FAMQMEGFANEFSAILSRQTEGN 228
FA E A+L RQ+ G+
Sbjct: 180 VYSDRALFAEEMIALLQRQSVGS 202
>gi|114330313|ref|YP_746535.1| MotA/TolQ/ExbB proton channel [Nitrosomonas eutropha C91]
gi|114307327|gb|ABI58570.1| Cell division and transport-associated protein TolQ [Nitrosomonas
eutropha C91]
Length = 234
Score = 189 bits (481), Expect = 2e-46, Method: Composition-based stats.
Identities = 64/221 (28%), Positives = 103/221 (46%), Gaps = 5/221 (2%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
D+S L L V+ ++ LL + S +SW I +K +Q EFE +FW G
Sbjct: 6 TQDLSFLHLISGASLPVQLVMLLLLLASFISWWFIFRKLFTLRQEIKQTDEFESVFWRGS 65
Query: 68 SLETVCKSLKN--HHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
L + + + H + IF + E+ K + I D M RE+
Sbjct: 66 DLNALYQRAASARHAAGSMERIFEAGFREFTKY--QSGIDIGPIMDSTRGAMRAVYQREM 123
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV-SIPGIIESLISILL 184
+ + LSFL ++ S VG+ G V G+M F+ ++ + PGI E+LI+ +
Sbjct: 124 DRLESHLSFLATVGSVSPYVGLFGTVWGIMNAFRELSNVGQATIAHVAPGIAEALIATAM 183
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
GL +IP+ IAYN++ D+ + A + E F E S +L R+
Sbjct: 184 GLFAAIPAVIAYNRYASDTAQLATRYESFIEEVSNVLQRRV 224
>gi|92117068|ref|YP_576797.1| MotA/TolQ/ExbB proton channel [Nitrobacter hamburgensis X14]
gi|91799962|gb|ABE62337.1| outer membrane transport energization protein ExbB [Nitrobacter
hamburgensis X14]
Length = 337
Score = 189 bits (481), Expect = 2e-46, Method: Composition-based stats.
Identities = 57/225 (25%), Positives = 103/225 (45%), Gaps = 4/225 (1%)
Query: 3 NYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQL 62
+ D+S +++F+ + VK ++ L S+++W++ I K + +R R
Sbjct: 100 PEPTTLHDLSPWSMFLTADILVKFVMIGLAFASLVTWTICIAKMIELSLAQRALRAALTT 159
Query: 63 FWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIA 122
+SL +L + LA++ +AM E + S G S GI++R +
Sbjct: 160 ISESRSLAEAQMALGAKDGV-LASLLAAAMREARLSA--GISSDAGIKERAASNFAEIVR 216
Query: 123 RELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLIS 181
E I + L ++ + VG+ G V G+M F I+ + N+ V PGI E+L++
Sbjct: 217 AESRRIRLGMGLLATIGATSPFVGLFGTVWGIMNSFIGISKAQTTNLAVVAPGIAEALLA 276
Query: 182 ILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
LGL +IP+ I YN F +K + + + +LSR +
Sbjct: 277 TALGLVAAIPAVIIYNHFARVTKGYTELVGRASGAAGRLLSRDLD 321
>gi|319779145|ref|YP_004130058.1| MotA/TolQ/ExbB proton channel family protein [Taylorella
equigenitalis MCE9]
gi|317109169|gb|ADU91915.1| MotA/TolQ/ExbB proton channel family protein [Taylorella
equigenitalis MCE9]
Length = 229
Score = 189 bits (481), Expect = 3e-46, Method: Composition-based stats.
Identities = 72/229 (31%), Positives = 110/229 (48%), Gaps = 5/229 (2%)
Query: 1 MNNYGLAIMD-ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREF 59
MN + D +SI L L V+ I+ LL + S++SW++I K + + F
Sbjct: 1 MNEVAINTPDKMSILTLITDASLPVQIIMLLLLVLSVVSWAIIFSKFTLLLGSNTSNKNF 60
Query: 60 EQLFWSGQSLETVCKSLKNHHNIG--LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMM 117
FW G L + ++ A +F + M+E+ K+ K SP DR M
Sbjct: 61 LNDFWRGGDLTDLHSKIQKAPRKYGITARVFEAGMTEFLKARSKKL-SPELQTLAADRAM 119
Query: 118 DVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGII 176
RE++ + +LSFL ++ S +G+LG V G+M F + + + PGI
Sbjct: 120 QATYNREMDGLDSRLSFLATVGSVSPYIGLLGTVWGIMHSFLGLTADTTATLSAVAPGIA 179
Query: 177 ESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
E+LI+ +GL +IP+SIAYN F K + EGF +EF IL RQ
Sbjct: 180 EALIATAIGLFAAIPASIAYNSFSRSIDKVSTNTEGFMDEFLNILQRQA 228
>gi|170733074|ref|YP_001765021.1| MotA/TolQ/ExbB proton channel [Burkholderia cenocepacia MC0-3]
gi|169816316|gb|ACA90899.1| MotA/TolQ/ExbB proton channel [Burkholderia cenocepacia MC0-3]
Length = 301
Score = 189 bits (481), Expect = 3e-46, Method: Composition-based stats.
Identities = 50/221 (22%), Positives = 91/221 (41%), Gaps = 11/221 (4%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YGL AL+ + ++ LL I S+ SW ++I K V + R+ + +
Sbjct: 72 NPYGLG-------ALWKNGDFVARFVLILLVIMSMGSWYIMITKFVEQLRANRRAKLADA 124
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
WS SL K L E + D+ + ID ++ +I
Sbjct: 125 QLWSAPSLAEGAKLLDEASPF---RFIAETAIEAGEHHDEALLEAVDRNTWIDVSVERSI 181
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLI 180
+ + L+FL ++ S VG+ G V G+ +I ++ + G + E+LI
Sbjct: 182 TNVSNRMQDGLAFLATVGSTAPFVGLFGTVWGIYHALTAIGIAGQASIDKVAGPVGEALI 241
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+GL V++P+ + YN + +K ++ F + +L
Sbjct: 242 MTAIGLAVAVPAVLGYNFLVRRNKSVMERVRNFGAQLHTVL 282
>gi|302381974|ref|YP_003817797.1| protein TolQ [Brevundimonas subvibrioides ATCC 15264]
gi|302192602|gb|ADL00174.1| protein TolQ [Brevundimonas subvibrioides ATCC 15264]
Length = 255
Score = 189 bits (481), Expect = 3e-46, Method: Composition-based stats.
Identities = 76/219 (34%), Positives = 119/219 (54%), Gaps = 4/219 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
++ LFM VK ++ L + S+ SW++II K+V F L RQ FE SG+SLE
Sbjct: 13 MNPVTLFMTADWVVKSVMVGLAVASVWSWTIIIDKAVRFTALNRQADAFEAAISSGRSLE 72
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIG---IQDRIDRMMDVAIARELEE 127
V L + + A+ +WK++ KG + + RIDR +D IARE +
Sbjct: 73 DVAAQAGPQPTHALPRMLVVALGDWKETRQKGPMTDTQGNLLVSRIDRALDSLIAREGQR 132
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
I E L L +++A +G+ G V G+M F IA + N+ ++ P I E+L + +GL
Sbjct: 133 IEEGLGVLSVVATASPFIGLFGTVWGIMNAFGRIAAAGNTNLTTVAPAIAEALFATAVGL 192
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ IAYNKF D+ KF ++E FA++ A ++R+
Sbjct: 193 AAAIPAYIAYNKFSIDAGKFTGRLESFADDLQAAVARRL 231
>gi|39936540|ref|NP_948816.1| enterochelin uptake protein ExbB [Rhodopseudomonas palustris
CGA009]
gi|39650396|emb|CAE28919.1| possible exbB, uptake of enterochelin; tonB-dependent uptake of B
colicins [Rhodopseudomonas palustris CGA009]
Length = 234
Score = 189 bits (480), Expect = 3e-46, Method: Composition-based stats.
Identities = 56/221 (25%), Positives = 107/221 (48%), Gaps = 4/221 (1%)
Query: 7 AIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG 66
+ ++S + +F+ + VK ++ L I S+++W++ I K V R + R +
Sbjct: 4 GLSELSPWTMFLNADIIVKIVMIGLAISSVITWTIFIAKKVELGRARFRLRRSLKEIGES 63
Query: 67 QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
+SL +L + H++ L+ + +A+ E K S G S GI++R + E
Sbjct: 64 RSLAEAQMALGDKHSV-LSMLLAAALREAKLSA--GLSSDEGIKERAASSFSEYVRAEGR 120
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLG 185
+ + FL ++ + +G+ G V G+M F I+ + N+ V PGI E+L++ +G
Sbjct: 121 HMRRGMGFLATIGATAPFIGLFGTVWGIMNSFIGISKSQTTNLAVVAPGIAEALLATAIG 180
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
L +IP+ I YN F + K + + + +LSR +
Sbjct: 181 LVAAIPAVIIYNHFSREIKLYLELVARASGAAGRLLSRDLD 221
>gi|85714773|ref|ZP_01045759.1| MotA/TolQ/ExbB proton channel [Nitrobacter sp. Nb-311A]
gi|85698259|gb|EAQ36130.1| MotA/TolQ/ExbB proton channel [Nitrobacter sp. Nb-311A]
Length = 360
Score = 189 bits (480), Expect = 3e-46, Method: Composition-based stats.
Identities = 57/221 (25%), Positives = 103/221 (46%), Gaps = 4/221 (1%)
Query: 7 AIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG 66
+ ++S +++F+ + VK ++ L S+++W++ I K V RR +
Sbjct: 130 SSHELSPWSMFLSADIIVKLVMIGLAFASLVTWTICIAKMVELSLARRNLGTALREISES 189
Query: 67 QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
+SL +L + LA++ SAM E + S G S GI++R + E
Sbjct: 190 RSLAEAQMALGARDGV-LASLLASAMHEARLSA--GISSDAGIKERAASSFAEIVRAESR 246
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLG 185
+ + L ++ + VG+ G V G+M F I+ + N+ V PGI E+L++ LG
Sbjct: 247 RVRLGMGLLATIGATSPFVGLFGTVWGIMNSFIGISKAQTTNLAVVAPGIAEALLATALG 306
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
L +IP+ I YN F +K + + + +LSR +
Sbjct: 307 LVAAIPAVIIYNHFARVTKGYIELVSRASGSAGRLLSRDLD 347
>gi|119356687|ref|YP_911331.1| MotA/TolQ/ExbB proton channel [Chlorobium phaeobacteroides DSM 266]
gi|119354036|gb|ABL64907.1| Cell division and transport-associated protein TolQ [Chlorobium
phaeobacteroides DSM 266]
Length = 225
Score = 189 bits (480), Expect = 3e-46, Method: Composition-based stats.
Identities = 58/220 (26%), Positives = 108/220 (49%), Gaps = 4/220 (1%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
IF + G AV ++ +L FS++SW++I K ++ REF F+ S++ +
Sbjct: 8 IFFMLSDAGPAVLAVLIVLLGFSVVSWAIIAFKFGYVNKSIKESREFLDCFFELSSVDKI 67
Query: 73 CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKL 132
+ + + LA +F SA E++ ++ +++R+ R + + E + + +
Sbjct: 68 FVESEKYRSSSLARVFRSAYIEYRALVERNGE--RHVEERVARAVKREVNAESKRLVYLV 125
Query: 133 SFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV-SIPGIIESLISILLGLCVSIP 191
FL ++ + +G+ G V G+M FQ I S ++ PGI E+L++ GL +IP
Sbjct: 126 PFLATVGNTAPFIGLFGTVWGIMTSFQQIGLTQSASLASVAPGISEALVATAAGLVAAIP 185
Query: 192 SSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE-GNIS 230
+ IAYN F + +E F+ EF R + G++S
Sbjct: 186 AVIAYNYFTQQIALIDRDLEDFSGEFVTACIRNIQKGSVS 225
>gi|260774731|ref|ZP_05883634.1| biopolymer transport protein ExbB [Vibrio coralliilyticus ATCC
BAA-450]
gi|260609293|gb|EEX35445.1| biopolymer transport protein ExbB [Vibrio coralliilyticus ATCC
BAA-450]
Length = 264
Score = 189 bits (480), Expect = 3e-46, Method: Composition-based stats.
Identities = 52/219 (23%), Positives = 97/219 (44%), Gaps = 4/219 (1%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
D+S + ++ VK ++ LL + S ++W++ I K + RR+ R ++
Sbjct: 36 HDMSPYGMYQSADWVVKAVMILLLVASGVTWAIGIAKQIQLNLARRRARHILNELLDSET 95
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
L + GLA I +E + + A + GI++R+ ++ A +
Sbjct: 96 LVEGKLRCDSAEGAGLALI---EATEKELALSARADNEDGIKERLQLRLERVQAGLSSAM 152
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
L ++ S G VG+ G V G+M F IA + + V PGI E+L++ +GL
Sbjct: 153 VGGTGVLATVGSVGPFVGLFGTVWGIMNAFIGIAKSQNTTLAVVAPGIAEALLATAIGLV 212
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ + YN F ++ M + ++SR +
Sbjct: 213 AAIPAVVLYNHFTRGVSQYRALMADISAALMVLVSRDLD 251
>gi|227114381|ref|ZP_03828037.1| biopolymer transport protein [Pectobacterium carotovorum subsp.
brasiliensis PBR1692]
Length = 246
Score = 189 bits (480), Expect = 3e-46, Method: Composition-based stats.
Identities = 44/214 (20%), Positives = 88/214 (41%), Gaps = 3/214 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+ I + Q + + +L I S+LSW+V++ K+ + L + + FW SL+
Sbjct: 4 LDIHHFWQQGDVVTHSVAIILLIMSLLSWTVMLLKARQLLALNKSVQYSRNTFWQATSLQ 63
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCD--KGARSPIGIQDRIDRMMDVAIARELEEI 128
+ + + + K + + D + R + + ++
Sbjct: 64 ESVEKFGKQRFNPFRDLVIEGHALLKHPHKFSSTLGGHVDLSDWLVRGLSNTLDTNSGKL 123
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLC 187
L L S+ S +G+LG V G+ Q+I+ ++ + G + E+LI GL
Sbjct: 124 QSGLGTLASIGSTAPFIGLLGTVWGIFHALQTISTIGQPDLAQVAGPVGEALIMTAFGLF 183
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
V+IP+ + +N ++ M FA++ A L
Sbjct: 184 VAIPAVLGFNAINRRNRIVLHAMNRFAHDLHAYL 217
>gi|224370142|ref|YP_002604306.1| TolQ1 [Desulfobacterium autotrophicum HRM2]
gi|223692859|gb|ACN16142.1| TolQ1 [Desulfobacterium autotrophicum HRM2]
Length = 236
Score = 189 bits (480), Expect = 3e-46, Method: Composition-based stats.
Identities = 58/224 (25%), Positives = 103/224 (45%), Gaps = 10/224 (4%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
IF + GL VK ++ LL FSI SW++I K + +F LFW ++L
Sbjct: 8 IFHMLSNAGLVVKLVLLLLLFFSITSWAIIFIKYRYVKKAYGESVDFTDLFWQCRNLSDA 67
Query: 73 CKSLKNHHNIGLAAIFMSAMSEWKKSCD---------KGARSPIGIQDRIDRMMDVAIAR 123
K +A +F++ E K++ + + + + R + +I
Sbjct: 68 FSKAKVLKQSPVARVFVAGYLEIKRASEPSGEGVGEKRATDTNFMGLGNVKRALRRSINL 127
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISI 182
E+ +++ + FL + + +G+ G V G+M F I S ++ V PGI E+L++
Sbjct: 128 EVRRLSQLVPFLATAGNTAPFIGLFGTVWGIMNTFHGIGTTGSASLAVVAPGISEALVAT 187
Query: 183 LLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
GL V+IP+ IAYN F + + +++ FA + I+ R
Sbjct: 188 AAGLAVAIPAVIAYNYFTDRIRVLDSELQSFAADLLNIIERDIH 231
>gi|299139859|ref|ZP_07033031.1| MotA/TolQ/ExbB proton channel [Acidobacterium sp. MP5ACTX8]
gi|298598213|gb|EFI54379.1| MotA/TolQ/ExbB proton channel [Acidobacterium sp. MP5ACTX8]
Length = 249
Score = 189 bits (480), Expect = 3e-46, Method: Composition-based stats.
Identities = 62/220 (28%), Positives = 111/220 (50%), Gaps = 5/220 (2%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG---Q 67
SI L+ QMG KC++ +LFI SI S +VII +++ F R+Q REF
Sbjct: 30 FSIPQLWAQMGWPAKCVVIILFIMSIWSLAVIIDRALYFSAARKQSREFAPKVAGALKEG 89
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
L+ K LA + + +SE++ GA +P + + R ++ A + +
Sbjct: 90 RLDEAIKVADRSKKSHLAEVVTAGLSEFRSFGSGGAITPEQV-ESSKRALERAESITHAK 148
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
+ + LS L ++ S +G+ G V+G++ F+SIA S+ + GI E+L++ GL
Sbjct: 149 LKKGLSGLATIGSTAPFIGLFGTVIGILNAFRSIASSKSSGIGQVAGGISEALVTTAFGL 208
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
V+IP+ + +N F + F ++M+ ++E +Q+
Sbjct: 209 LVAIPAVMCFNYFTSKVEAFDVEMDNSSSELVDYFIKQSH 248
>gi|227328309|ref|ZP_03832333.1| biopolymer transport protein [Pectobacterium carotovorum subsp.
carotovorum WPP14]
Length = 246
Score = 188 bits (479), Expect = 4e-46, Method: Composition-based stats.
Identities = 45/214 (21%), Positives = 87/214 (40%), Gaps = 3/214 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+ I + Q L + +L I S+LSW+V++ K+ L + + FW SL+
Sbjct: 4 LDIHHFWQQGDLVTHSVAIILLIMSLLSWTVMLLKARQLFALNKSVQYSRNTFWQATSLQ 63
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCD--KGARSPIGIQDRIDRMMDVAIARELEEI 128
+ + + + K + + D + R + + ++
Sbjct: 64 ESVEKFGRQRFNPFRDLVIEGHALLKHPHKFSSTLGGHVDLSDWLVRGLSNTLDTNSGKL 123
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLC 187
L L S+ S +G+LG V G+ Q+I+ ++ + G + E+LI GL
Sbjct: 124 QSGLGTLASIGSTAPFIGLLGTVWGIFHALQTISTIGQPDLAQVAGPVGEALIMTAFGLF 183
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
V+IP+ + +N ++ M FA++ A L
Sbjct: 184 VAIPAVLGFNAINRRNRIVLHAMNRFAHDLHAYL 217
>gi|254294747|ref|YP_003060770.1| protein TolQ [Hirschia baltica ATCC 49814]
gi|254043278|gb|ACT60073.1| protein TolQ [Hirschia baltica ATCC 49814]
Length = 266
Score = 188 bits (479), Expect = 4e-46, Method: Composition-based stats.
Identities = 72/227 (31%), Positives = 116/227 (51%), Gaps = 4/227 (1%)
Query: 7 AIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG 66
A D S AL + G VK ++ +L I SI SW V K R++ R+FE+ FWSG
Sbjct: 38 AHSDFSFLALILAAGPVVKVVMLVLVIMSIWSWMVTFDKWTGMGAARKKGRQFEEAFWSG 97
Query: 67 QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSP---IGIQDRIDRMMDVAIAR 123
Q L+ + + + + LA ++ + EW+++ + + R M+VA+ R
Sbjct: 98 QPLDEMDDRVGDKPSDALARVYSAGSREWREARRLRTLTDTVATSLLQRARSQMNVAVNR 157
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISI 182
E + + LS L +SS+ +G+ G V G+M F+ I N+ V PG+ E+L +
Sbjct: 158 EAARLEKGLSTLAIISSSAPFIGLFGTVWGIMTAFRDIGMAGETNLAVVAPGMAEALFAT 217
Query: 183 LLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNI 229
LGL +IP+ + YNKF + KF M+ FA EF+ +SR+ +
Sbjct: 218 ALGLLAAIPAMMFYNKFSGEVNKFVEHMDTFAEEFTVRISRRLAERL 264
>gi|86748778|ref|YP_485274.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris HaA2]
gi|86571806|gb|ABD06363.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris HaA2]
Length = 286
Score = 188 bits (479), Expect = 4e-46, Method: Composition-based stats.
Identities = 54/222 (24%), Positives = 103/222 (46%), Gaps = 6/222 (2%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
D+S +A+F+ VK +I L + S+ +W+V + K + + R+ R +
Sbjct: 48 PHDLSPWAMFVAADNIVKAVIIGLALASLATWTVWLVKVIELTSALRKARSALRKLQRAD 107
Query: 68 SLETVCKSLKNH--HNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
+L + ++ + +A + +A+ E ++S D A G+++R+ + AR
Sbjct: 108 NLADATREIEAEWTKDGPVADLVQAALRETERSVDLAA---DGVKERLAIALSRIEARAG 164
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILL 184
++ L ++ + +G+ G V G+M F IA + N+ V PGI E+L++ +
Sbjct: 165 RDMARSTGLLATIGATAPFIGLFGTVWGIMNSFIGIAQSKTTNLAVVAPGIAEALLATAI 224
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
GL +IP+ I YN F + + + E LSR E
Sbjct: 225 GLVAAIPAVIIYNVFARAIAGYRALLSDASGEVLQHLSRDLE 266
>gi|332529071|ref|ZP_08405036.1| MotA/TolQ/ExbB proton channel [Hylemonella gracilis ATCC 19624]
gi|332041515|gb|EGI77876.1| MotA/TolQ/ExbB proton channel [Hylemonella gracilis ATCC 19624]
Length = 242
Score = 188 bits (478), Expect = 5e-46, Method: Composition-based stats.
Identities = 48/219 (21%), Positives = 89/219 (40%), Gaps = 9/219 (4%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+ ++ Q + + LL SI SW VI+ K+++ + R+Q E FW L
Sbjct: 5 FGLSHVWSQGDWITRSVALLLLGMSIASWVVIVLKALDLMRCRKQAALTED-FWRSTDLA 63
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSE-------WKKSCDKGARSPIGIQDRIDRMMDVAIAR 123
L + F A++E ++ + + D + R + +I
Sbjct: 64 EGLNRLNLPKDRHPQDNFFRALAEEGREAALHHRNAKAQLHDSLDVSDWVTRSLRNSIDN 123
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISI 182
++ L+ L ++ S +G+ G V G+ SI ++ + G I E+LI
Sbjct: 124 ATAKLQGGLAVLATVGSTSPFIGLFGTVWGIYHALLSIGASGQASIDQVAGPIGEALIMT 183
Query: 183 LLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
GL V+IP+ + N + +K Q+ FA++ A
Sbjct: 184 AFGLAVAIPAVLGNNALVRGNKAVLGQLNSFAHDLHAYF 222
>gi|49082190|gb|AAT50495.1| PA0198 [synthetic construct]
Length = 240
Score = 188 bits (478), Expect = 5e-46, Method: Composition-based stats.
Identities = 54/201 (26%), Positives = 105/201 (52%), Gaps = 4/201 (1%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLA 85
+I LL FS+++W + + K V F +RQ R+F++ FWS SL++ + ++ G A
Sbjct: 14 AVIWLLVGFSVVTWGLALVKGVQFARQKRQDRQFQKQFWSATSLDSAGEQAQDKQGAG-A 72
Query: 86 AIFMSAMSEWK--KSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
+ + + + + I QDR++R + I RE + L+ L S+ S
Sbjct: 73 RVAQAGFAAIQVQDNGQPDLAQSINHQDRLERALRQQIQRERRSLGSGLAVLASIGSTSP 132
Query: 144 LVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIPSSIAYNKFIED 202
+G+ G V G+M + I+ S ++ ++ G I +LI+ +G+ V++P+ + YN F+
Sbjct: 133 FIGLFGTVWGIMEALKGISAAGSASLETVAGPIGSALIATGVGIAVAVPAVLVYNYFLRR 192
Query: 203 SKKFAMQMEGFANEFSAILSR 223
K A ++ FA++F ++ +
Sbjct: 193 LKLTAADLDDFAHDFYSLAQK 213
>gi|187931252|ref|YP_001891236.1| group A colicin translocation; tolQ protein [Francisella tularensis
subsp. mediasiatica FSC147]
gi|187712161|gb|ACD30458.1| group A colicin translocation; tolQ protein [Francisella tularensis
subsp. mediasiatica FSC147]
Length = 235
Score = 188 bits (478), Expect = 5e-46, Method: Composition-based stats.
Identities = 56/221 (25%), Positives = 108/221 (48%), Gaps = 3/221 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
IS+ L + V+ I+ L S+ SW+++++ + R + +F++LFW+G ++
Sbjct: 5 ISLVELVLHANFIVQLIMLALVAMSVYSWAIMLEVNNRVKKYRNEQVQFDKLFWAGHHIQ 64
Query: 71 TVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ H G + IF S + E+ D I + ++R + +AIA+E +E+
Sbjct: 65 KLHDYYLQHKENIFGKSIIFCSGLREFNNLKDTCMLRGDTILEGMERTVSIAIAQEAKEL 124
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
KL L ++ + +G++G V G+M F ++ G + V P I E+LI+ LGL
Sbjct: 125 DRKLPALATIGAVAPYIGLVGTVWGIMSSFNTLGGVEQATISVVAPHIAEALIATALGLF 184
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
V+IP+ I ++K E F ++ +L ++ +
Sbjct: 185 VAIPAVIGHSKLSNQVDDILSSYESFQDDLCILLLKEAHRD 225
>gi|197105655|ref|YP_002131032.1| MotA/TolQ/ExbB proton channel family protein [Phenylobacterium
zucineum HLK1]
gi|196479075|gb|ACG78603.1| MotA/TolQ/ExbB proton channel family protein [Phenylobacterium
zucineum HLK1]
Length = 301
Score = 188 bits (478), Expect = 5e-46, Method: Composition-based stats.
Identities = 60/223 (26%), Positives = 103/223 (46%), Gaps = 7/223 (3%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+++ +FM VK I+ L + S+ +W++++ K + F +L R F + F +S+
Sbjct: 76 LNVGTMFMDADPVVKVIMIGLALASVFTWTILLTKILEFRSLNRVTDSFLENFRGAKSIN 135
Query: 71 TVCKSL--KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQD----RIDRMMDVAIARE 124
+ + + LA + +A E + S G ++ R + A
Sbjct: 136 DMNRIAMSEEFDGNPLADMAAAAAQEVELSRQAGLSITGDHRETTLMRAQAAVGAVQASL 195
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISIL 183
++ + FL S+ S G +G+ G V G+M F IA + N+ V PGI E+L++
Sbjct: 196 GRRLSGGMQFLASVGSNGPFIGLFGTVYGIMNSFIGIANTNTTNLAVVAPGIAEALLATG 255
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
LGL +IPS I YN F + + EGF E +SRQ +
Sbjct: 256 LGLFAAIPSVIFYNYFQTRISAYGARTEGFVAELMNAISRQLD 298
>gi|167840957|ref|ZP_02467641.1| MotA/TolQ/ExbB proton channel [Burkholderia thailandensis MSMB43]
Length = 286
Score = 188 bits (478), Expect = 5e-46, Method: Composition-based stats.
Identities = 50/221 (22%), Positives = 93/221 (42%), Gaps = 11/221 (4%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YGL AL+ + ++ LL + S+ SW ++I K + + R+ + ++
Sbjct: 57 NPYGLG-------ALWKNGDFVARFVLLLLVVMSMGSWYIMITKFLEQLRAYRRAKVADE 109
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
WS SL K L E + D+ + ID ++ AI
Sbjct: 110 QLWSAPSLAEGAKRLDEASPF---RFIAETAIEAGEHHDEALLEAVDRNTWIDVSVERAI 166
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLI 180
+ + L+FLG++ S VG+ G V G+ +I ++ + G + E+LI
Sbjct: 167 TNVSNRLQDGLAFLGTVGSTAPFVGLFGTVWGIYHALTAIGIAGQASIDKVAGPVGEALI 226
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+GL V++P+ + YN + +K ++ F + +L
Sbjct: 227 MTAIGLAVAVPAVLGYNFLVRRNKSVMERVRNFGAQLHTVL 267
>gi|153003578|ref|YP_001377903.1| Tol-Pal system TolQ [Anaeromyxobacter sp. Fw109-5]
gi|152027151|gb|ABS24919.1| Tol-Pal system TolQ [Anaeromyxobacter sp. Fw109-5]
Length = 245
Score = 188 bits (478), Expect = 5e-46, Method: Composition-based stats.
Identities = 52/214 (24%), Positives = 105/214 (49%), Gaps = 8/214 (3%)
Query: 19 QMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKN 78
G ++ LL S +SW++I++K + + + +F + FW + L+ + ++ ++
Sbjct: 29 NSGPIGIGVLLLLLGASAVSWAIIVKKWLQIRRAQDESVKFLETFWQSKRLDAIYQAAES 88
Query: 79 HHNIGLAAIFMSAMSEWKKSC-------DKGARSPIGIQDRIDRMMDVAIARELEEITEK 131
++ +F + E K + +G + ++R + A A E+ + +
Sbjct: 89 LSASPISQVFRAGYVELSKVTAQKKEGGEGSMSDELGGIENVERALKRAAASEVTHLEAQ 148
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSI 190
+ FLG+ +SA VG+ G V G+M F I + N+ ++ I E+LI+ +GL +I
Sbjct: 149 VPFLGTTASAAPFVGLFGTVWGIMRAFHDIYQAGNANLATVAKPISEALIATAVGLFAAI 208
Query: 191 PSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
P+ +AYN F+ + +M F+N+F I+ R
Sbjct: 209 PAVVAYNYFVSKIRVLDSEMTNFSNDFLNIVRRH 242
>gi|312116244|ref|YP_004013840.1| MotA/TolQ/ExbB proton channel [Rhodomicrobium vannielii ATCC 17100]
gi|312116280|ref|YP_004013876.1| MotA/TolQ/ExbB proton channel [Rhodomicrobium vannielii ATCC 17100]
gi|311221373|gb|ADP72741.1| MotA/TolQ/ExbB proton channel [Rhodomicrobium vannielii ATCC 17100]
gi|311221409|gb|ADP72777.1| MotA/TolQ/ExbB proton channel [Rhodomicrobium vannielii ATCC 17100]
Length = 246
Score = 188 bits (478), Expect = 5e-46, Method: Composition-based stats.
Identities = 60/219 (27%), Positives = 105/219 (47%), Gaps = 4/219 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
++ LF Q + VK ++ LL + S W +I KS+ L + + + G L
Sbjct: 17 LTPLELFQQADIVVKAVMGLLILASAWGWGIIAAKSIQLAILNARAKRLLKSLAHGVPLT 76
Query: 71 TVCKS-LKNHHNIGLAAIFMSAMSEWKKSCD--KGARSPIGIQDRIDRMMDVAIARELEE 127
+ ++ LK N L ++ S + E K+S + A + DR+ R+ +A + L+
Sbjct: 77 DLSETFLKVQPNDPLRVVYQSMIDENKRSAELRHSAAQQESLLDRVYRVGQLASSNTLDR 136
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
+ L L ++ + VG+ G V G+M FQ IA + ++ V PGI E+L + LGL
Sbjct: 137 LKGGLQSLATIGAVSPFVGLFGTVWGIMNSFQGIAASNNTSLAVVAPGIAEALFATALGL 196
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ + YN+ + +F ++ F + LSRQ
Sbjct: 197 VAAIPAVVFYNRINGNIGQFGKSLKTFVEVYGVELSRQL 235
>gi|308271864|emb|CBX28472.1| Protein tolQ [uncultured Desulfobacterium sp.]
Length = 258
Score = 188 bits (478), Expect = 6e-46, Method: Composition-based stats.
Identities = 61/237 (25%), Positives = 102/237 (43%), Gaps = 15/237 (6%)
Query: 4 YGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLF 63
Y + + +F + G+ V+ ++ L +FSI SW++I K ++ F F
Sbjct: 14 YSMGSQQLDLFHMIGNAGIVVQGVLMTLVLFSITSWAIIFIKYKYLRRAFKESEAFTDYF 73
Query: 64 WSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSC--------------DKGARSPIGI 109
W + V K LA IF +E K D S
Sbjct: 74 WRCRDFSDVYAKSKELTGSPLARIFRIGYAELAKLSQSGVSISSMSSESEDVTISSKFAG 133
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
D + R + AI E+ +T+ + FL + + +G+ G V G+M F I S +
Sbjct: 134 MDNVKRALRRAINSEITGLTQLVPFLATTGNTSPFIGLFGTVWGIMNSFHGIGLRGSATL 193
Query: 170 -VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
V PGI E+L++ GL +IP+ IA+N F++ + +++ FA +F I+ R T
Sbjct: 194 AVVAPGISEALVATAAGLAAAIPAVIAFNYFMQKIRNIESELQSFAADFLNIVERDT 250
>gi|46581502|ref|YP_012310.1| tolQ protein [Desulfovibrio vulgaris str. Hildenborough]
gi|120601332|ref|YP_965732.1| MotA/TolQ/ExbB proton channel [Desulfovibrio vulgaris DP4]
gi|46450924|gb|AAS97570.1| tolQ protein [Desulfovibrio vulgaris str. Hildenborough]
gi|120561561|gb|ABM27305.1| Cell division and transport-associated protein TolQ [Desulfovibrio
vulgaris DP4]
gi|311235151|gb|ADP88005.1| protein TolQ [Desulfovibrio vulgaris RCH1]
Length = 230
Score = 188 bits (478), Expect = 6e-46, Method: Composition-based stats.
Identities = 58/221 (26%), Positives = 109/221 (49%), Gaps = 2/221 (0%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
M+ + F + Q L K ++ LL + SI SWS++ QK RR+ + + F +
Sbjct: 1 MENNFFQIIGQATLVAKFVLALLVLMSIGSWSLMFQKLFALRAARRKAEDGLERFLRARD 60
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
L +SL L + ++E+ + + G + + D + R + +A E+ +
Sbjct: 61 LREAVQSLGGDATSPLYHVAQQGVAEFNRLKEMGNSGEV-VADNVRRALRQGVANEMSSL 119
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLC 187
+ LSFL + ++ +G+ G V G+M F +I S ++ ++ PGI E+LI+ +GL
Sbjct: 120 SSSLSFLATAANTAPFIGLFGTVWGIMHSFHAIGMMKSASLATVAPGISEALIATAIGLA 179
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
V+IP+++ YN F+ +Q+ FA F + R+ +
Sbjct: 180 VAIPATVGYNVFLGMLAGIEVQVVNFAGVFLNRVQRELNAH 220
>gi|87198415|ref|YP_495672.1| MotA/TolQ/ExbB proton channel [Novosphingobium aromaticivorans DSM
12444]
gi|87134096|gb|ABD24838.1| Cell division and transport-associated protein TolQ
[Novosphingobium aromaticivorans DSM 12444]
Length = 227
Score = 188 bits (477), Expect = 6e-46, Method: Composition-based stats.
Identities = 68/223 (30%), Positives = 113/223 (50%), Gaps = 3/223 (1%)
Query: 7 AIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG 66
A+ D S ALF Q + VK I+ L SI +W++I+ + + FE
Sbjct: 5 AVTDFSPIALFAQADIVVKVIMLGLLAASIWTWAIIVAQILKNRRAHATSDLFEAEIREA 64
Query: 67 QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKS-CDKGARSPIGIQDRIDRMMDVAIAREL 125
K L AA+F +AM+EW KS + + ++RI +++ AI E+
Sbjct: 65 GFTGESSKHLA-RDASPAAALFKAAMAEWSKSVRARASLDKDAARERIADVLEGAIEGEV 123
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILL 184
+ ++E+L++L ++ S VG+ G V G+M F SIA + ++ V PGI E+L++ +
Sbjct: 124 DRLSERLNYLATIGSIAPFVGLFGTVWGIMRSFTSIAASQNTSLSVVAPGIAEALLATAI 183
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEG 227
GL +IP+ IAYN+F +F ++ FA LSR+ +
Sbjct: 184 GLFAAIPAVIAYNRFGHSLNRFEARLVRFARYLRGNLSRELDA 226
>gi|83859803|ref|ZP_00953323.1| TolQ, tolQ protein [Oceanicaulis alexandrii HTCC2633]
gi|83852162|gb|EAP90016.1| TolQ, tolQ protein [Oceanicaulis alexandrii HTCC2633]
Length = 217
Score = 188 bits (477), Expect = 7e-46, Method: Composition-based stats.
Identities = 57/217 (26%), Positives = 102/217 (47%), Gaps = 14/217 (6%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
+++I LFM+ + VK ++ +L + SI SW++ I+K + FE FWSG
Sbjct: 12 ATELTIMHLFMRADIVVKAVMAILALMSIWSWAIAIEKWMQLNKAHAGASRFENDFWSGG 71
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
SL+ + + +AM +W + ++ L +
Sbjct: 72 SLDQLVTKYAKPAKEPFGRVLAAAMRDWDGYAVAKSGGAEANRE-------------LNK 118
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
+ L L + S+ +G+ G V G+M F+SIA + ++ V PGI E+L + LGL
Sbjct: 119 MEAGLGVLSIIGSSAPFIGLFGTVWGIMNAFRSIAASENTSLAVVAPGISEALFATALGL 178
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
+IP+ I +N + K+A ++EG ++ +A+ SR
Sbjct: 179 LAAIPAVIFFNALSSNLAKYAARLEGLVDDLAALASR 215
>gi|302382824|ref|YP_003818647.1| MotA/TolQ/ExbB proton channel [Brevundimonas subvibrioides ATCC
15264]
gi|302193452|gb|ADL01024.1| MotA/TolQ/ExbB proton channel [Brevundimonas subvibrioides ATCC
15264]
Length = 293
Score = 188 bits (477), Expect = 7e-46, Method: Composition-based stats.
Identities = 57/223 (25%), Positives = 103/223 (46%), Gaps = 7/223 (3%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
I+ ++F L VK ++ L + SI SW+++ K + + L R+ F + F + +++
Sbjct: 68 ITPVSMFNDATLVVKVVMIGLLLASIFSWALLFIKLLEYGGLNRKTDRFLEEFRATRTIA 127
Query: 71 TV--CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQD----RIDRMMDVAIARE 124
+ + + LA + +A E + S G +D R + A
Sbjct: 128 DMRRVATSDEYDGNPLADMAAAATEEVELSRQAGLSVTGDHRDSALFRAQSAVAAVQAGL 187
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISIL 183
++ FL S+ S G VG+ G V G+M F I + N+ ++ PGI E+L++
Sbjct: 188 AARLSGGQQFLASVGSTGPFVGLFGTVYGIMNSFIGIVESNTTNLAAVAPGIAEALLATG 247
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+GL +IP+ + YN F + + +GFA E +SRQ +
Sbjct: 248 IGLFAAIPAVVFYNYFNTRISAYGTRSDGFAAELLNGISRQLD 290
>gi|317402708|gb|EFV83256.1| MotA/TolQ/ExbB proton channel family protein [Achromobacter
xylosoxidans C54]
Length = 254
Score = 188 bits (477), Expect = 7e-46, Method: Composition-based stats.
Identities = 57/220 (25%), Positives = 100/220 (45%), Gaps = 5/220 (2%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
+ D+ Q K + +L + S+++W +I+ K + I++RR+ +F FW+
Sbjct: 5 VPDMGFLHFVAQSDFVGKTLFIILILMSLVTWYLILVKVGSNISMRRRSADFLNKFWNSS 64
Query: 68 SLETVCKSL----KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAR 123
SLE V + LA+ M A + K D + R M I
Sbjct: 65 SLEQVEHEITTHGARDPFSHLASHAMHAQAHHNKFGATKLEEAGSNGDFVTRTMRKVIDE 124
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISI 182
E ++ L+ L S+ S VG+ G V G+ I + I G + E+LI
Sbjct: 125 ETAKLENGLTVLASVGSTAPFVGLFGTVWGVYHALVGIGLSDGVTINRIAGPVGEALIMT 184
Query: 183 LLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
LGL V+IP+ +AYN F+ +++ + +++ FA++ A L+
Sbjct: 185 GLGLAVAIPAVLAYNTFVRNNRVYLSRLDAFAHDLFAFLT 224
>gi|71065807|ref|YP_264534.1| TolQ proton channel [Psychrobacter arcticus 273-4]
gi|71038792|gb|AAZ19100.1| probable TolQ proton channel [Psychrobacter arcticus 273-4]
Length = 243
Score = 187 bits (476), Expect = 8e-46, Method: Composition-based stats.
Identities = 65/217 (29%), Positives = 110/217 (50%), Gaps = 3/217 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
++I L Q L V+ ++ LL + S+LSW +I + S T R ++FE FWSG+ L
Sbjct: 5 LNIIDLITQASLLVQIVMALLLLASLLSWVIIFRMSARLGTARNFDQQFETWFWSGEDLA 64
Query: 71 TVCKSLKNHH-NIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+ + ++ GL IF SE+ + K + I D ++R + V + R+ +
Sbjct: 65 KLYQGIQGSPERQGLEQIFYVGFSEYLRMHKKR-QPKDDIIDGVERKLRVGLGRQQLLLE 123
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCV 188
L+ L S+ S VG+ G V G+M F ++ + ++ PGI E+LI+ +GL
Sbjct: 124 SGLTTLASIGSVAPYVGLFGTVWGIMNAFLGLSQNEQATLAAVAPGIAEALIATAMGLFA 183
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ +AYN F S + F +E + +L R+T
Sbjct: 184 AIPAVLAYNHFTAKSSRLYDSRALFCDEMTGMLQRET 220
>gi|331019301|gb|EGH99357.1| tolQ protein [Pseudomonas syringae pv. lachrymans str. M302278PT]
Length = 212
Score = 187 bits (476), Expect = 8e-46, Method: Composition-based stats.
Identities = 53/203 (26%), Positives = 99/203 (48%), Gaps = 3/203 (1%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSL--KNHHNIGLA 85
+ +L + S++SW +I+Q+S+ R F+Q F S L + + G+
Sbjct: 1 MLILLLASLVSWFLIVQRSLALRHYERSLDAFQQRFRSEAELAPLYAQASSAQSDSGGIG 60
Query: 86 AIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLV 145
+IF + +E+ + + P + ++R + VAI+ + ++ + L FL ++ S +
Sbjct: 61 SIFQAGYAEYMQLKHRPGIDPDVVLSGVERSLQVAISEQELQLEKGLQFLATVGSVSPYI 120
Query: 146 GILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSK 204
G+ G V G+M F ++ + PGI E+LI+ +GL +IP+ IAYN+F +
Sbjct: 121 GLFGTVWGIMNSFIGLSQVQQATLSTVAPGIAEALIATAIGLFAAIPAVIAYNRFAARGQ 180
Query: 205 KFAMQMEGFANEFSAILSRQTEG 227
+ F NE L+R +G
Sbjct: 181 TLTARYYTFGNELQVRLNRTLQG 203
>gi|241589562|ref|YP_002979587.1| MotA/TolQ/ExbB proton channel [Ralstonia pickettii 12D]
gi|240868274|gb|ACS65933.1| MotA/TolQ/ExbB proton channel [Ralstonia pickettii 12D]
Length = 303
Score = 187 bits (476), Expect = 8e-46, Method: Composition-based stats.
Identities = 49/221 (22%), Positives = 94/221 (42%), Gaps = 11/221 (4%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YGL+ AL+ + ++ LL I S+ SW +++ K + + R+ + +
Sbjct: 70 NPYGLS-------ALWNNGDFVARFVLMLLVIMSMGSWYIMVTKFLEQMRANRRAKNADD 122
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
WS SL K L L E + D+ + ID ++ AI
Sbjct: 123 QLWSAPSLAAGAKLLDE---ASLFRFLAETAVEAGEHHDEALLESVDRNTWIDVSVERAI 179
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLI 180
+ + L+FL ++ S +G+ G V G+ +I ++ + G + E+LI
Sbjct: 180 TNVSNRLQDGLAFLATVGSTAPFIGLFGTVWGIYHALTAIGIAGQASIDKVAGPVGEALI 239
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+GL V++P+ + YN + +K ++ F + A++
Sbjct: 240 MTAIGLAVAVPAVLGYNFLVRRNKSVMERVRAFGAQLHAVV 280
>gi|298529982|ref|ZP_07017384.1| MotA/TolQ/ExbB proton channel [Desulfonatronospira thiodismutans
ASO3-1]
gi|298509356|gb|EFI33260.1| MotA/TolQ/ExbB proton channel [Desulfonatronospira thiodismutans
ASO3-1]
Length = 234
Score = 187 bits (476), Expect = 8e-46, Method: Composition-based stats.
Identities = 56/217 (25%), Positives = 103/217 (47%), Gaps = 4/217 (1%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
++++ Q L ++ I+ +L + S+ SW++II K +++ Q+F L
Sbjct: 10 LWSMLAQASLLIQFIMLVLLVMSVSSWTIIIYKFISYRRFTENLGNQLQIFDRASDLAEA 69
Query: 73 CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIG---IQDRIDRMMDVAIARELEEIT 129
K ++ + L I SA+ E +K S + +D + R++ ++ L+++
Sbjct: 70 MKKVRQDADSPLYRIGFSALKEIQKLEQSQLSSSVKFRIAEDNVRRVLRQGVSTHLKKLA 129
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGY-YSNNVVSIPGIIESLISILLGLCV 188
L FL +++ LL+G+LG V G+M F +I ++ PGI E+LI+ GL V
Sbjct: 130 SSLPFLAICANSSLLIGLLGTVWGIMNAFHAIGVQRGASLATVAPGISEALITTAFGLVV 189
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP++I YN E + FA F R+
Sbjct: 190 AIPATIFYNILWERLNSIQADLIYFAGAFLNRAQREL 226
>gi|226939428|ref|YP_002794501.1| ExbB-like biopolymer transport [Laribacter hongkongensis HLHK9]
gi|226714354|gb|ACO73492.1| probable ExbB-like biopolymer transport [Laribacter hongkongensis
HLHK9]
Length = 224
Score = 187 bits (476), Expect = 9e-46, Method: Composition-based stats.
Identities = 54/215 (25%), Positives = 109/215 (50%), Gaps = 4/215 (1%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
MD+S+ + Q + + LL S+ SW +I+Q+S+ L RQ R++ + FW+ S
Sbjct: 1 MDVSL--VMQQGDAVLIGVFALLLAMSLGSWWLILQRSLVLARLSRQARQWSRQFWAADS 58
Query: 69 LETVCKSLKNH-HNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
L++ L + +A + + +++ + + G+ + + R + +A++RE
Sbjct: 59 LDSARGQLDTPLPHARIATAGLEGLDHYRQHAQRSLGAACGLDEFLVRTIRMALSRETGR 118
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGL 186
+ L++L ++ S VG+ G V G+ IA ++ ++ G I E+L++ GL
Sbjct: 119 LESGLTWLATVGSIAPFVGLFGTVWGIYHALVGIAAEGQVSIGTVSGPIGEALVATAAGL 178
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+IP+ +AYN F ++ + M+ FA++ A L
Sbjct: 179 FAAIPAVVAYNAFTRVNRVLSQDMDSFAHDLHAQL 213
>gi|189426519|ref|YP_001953696.1| protein TolQ [Geobacter lovleyi SZ]
gi|189422778|gb|ACD97176.1| protein TolQ [Geobacter lovleyi SZ]
Length = 227
Score = 187 bits (476), Expect = 1e-45, Method: Composition-based stats.
Identities = 53/206 (25%), Positives = 95/206 (46%), Gaps = 9/206 (4%)
Query: 32 FIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSA 91
+FS++SW++I+ K + F FW + +++ + + L A+F
Sbjct: 22 IMFSVVSWAIIMFKFFQIHKAFSESGRFMDFFWKTKRFDSISSQVDRFASSPLTALFNEG 81
Query: 92 MSEWKKSCDK--------GARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
SE K+ + G + +G + R + A E+ + + +FL + S
Sbjct: 82 YSELKQLMEAEGVKPDHGGVSTDLGGVANVSRALRRATNLEVNRLEKYTTFLATTGSTSP 141
Query: 144 LVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIED 202
+G+ G V G+M F+ I S ++ V PGI E+LI+ +GL +IP+ +AYN F
Sbjct: 142 FIGLFGTVWGIMVAFEGIGKTGSASLAVVAPGIAEALIATAVGLVAAIPAVMAYNHFQHK 201
Query: 203 SKKFAMQMEGFANEFSAILSRQTEGN 228
+ +M+ F+ EF I+ R G
Sbjct: 202 IRVLVKEMDSFSTEFLNIVQRNIAGK 227
>gi|209964014|ref|YP_002296929.1| biopolymer transport ExbB protein [Rhodospirillum centenum SW]
gi|209957480|gb|ACI98116.1| biopolymer transport ExbB protein [Rhodospirillum centenum SW]
Length = 337
Score = 187 bits (475), Expect = 1e-45, Method: Composition-based stats.
Identities = 51/226 (22%), Positives = 95/226 (42%), Gaps = 11/226 (4%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YGL+ AL+ Q K + + I S+ +W +++ K L RQ + +
Sbjct: 114 NPYGLS-------ALWAQGDFVSKGTLVAMIIMSMGTWYIMLTKLFEQSRLLRQAKVARK 166
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
FW+ S+ K L + +I S + + D I + + + +
Sbjct: 167 EFWTAGSITEGAKRLGDKSVFR--SIVESGVRS-AEHHDGALTDQIDLHTWVTMSLQRTV 223
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLI 180
+ E L+FL ++ S VG+ G V G+ +I ++ + G + E+LI
Sbjct: 224 ETTQSRLQEGLAFLATVGSTAPFVGLFGTVWGIYHALVAIGLSGQASIDKVAGPVGEALI 283
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+GL V++P+ + YN + +K + F+ + A+L QT
Sbjct: 284 MTAIGLAVAVPAVLGYNWLVRRNKACTDALRSFSADLHAVLLAQTH 329
>gi|332971556|gb|EGK10506.1| TonB family auxiliary protein ExbB [Kingella kingae ATCC 23330]
Length = 231
Score = 187 bits (475), Expect = 1e-45, Method: Composition-based stats.
Identities = 49/219 (22%), Positives = 103/219 (47%), Gaps = 3/219 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+++ +F Q + + L SI +W VI+ +S+ ++ R WS ++L+
Sbjct: 13 MNLGLVFQQGDPVLIGVFLFLVAMSICTWVVIVLRSIRHFAAKKANRAALDAIWSSKTLD 72
Query: 71 TVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ K + + LAA A + +S + + ++R + +I++ +
Sbjct: 73 NAEHAAKQNPSPISDLAAHAFVANRRFSESQQTLLSASLPKNAYLERELRHSISKIMNSY 132
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLC 187
++ L ++ S +G+LG V G+ +I+ ++ + G I E+L++ LGL
Sbjct: 133 DGGMTALATIGSTAPFIGLLGTVWGIYHALINISQKGQMSIAEVSGPIGEALVATALGLF 192
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
V+IP+ +AYN F +KK + ++ FA++ L + E
Sbjct: 193 VAIPAVLAYNCFTRGNKKLSRELHNFAHDLHVQLINEKE 231
>gi|182677234|ref|YP_001831380.1| tonB-system energizer ExbB [Beijerinckia indica subsp. indica ATCC
9039]
gi|182633117|gb|ACB93891.1| tonB-system energizer ExbB [Beijerinckia indica subsp. indica ATCC
9039]
Length = 355
Score = 187 bits (475), Expect = 1e-45, Method: Composition-based stats.
Identities = 54/223 (24%), Positives = 101/223 (45%), Gaps = 7/223 (3%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
D+S + +F + V+ ++ L S+++W++ I K + + R R + Q
Sbjct: 116 PHDLSPWGMFTHADIIVQGVMLGLLFASLVTWTIGIAKCLELMAGDRNARRGLNILSGAQ 175
Query: 68 SLETVCKSLKNHHNIG---LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARE 124
SL +L+ G +A + +A++E ++S A G+++R ++ R
Sbjct: 176 SLRLADSALEGTLGRGKGVVAKLVSAAIAEAERSQGLPAD---GVKERAAALLSRIEIRA 232
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISIL 183
+T L ++ + G VG+ G V G+M F I+ + N+ V PGI E+L++
Sbjct: 233 SRAMTRGTGLLATIGATGPFVGLFGTVWGIMNSFIGISKSNTTNLAVVAPGIAEALLATA 292
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
GL +IP+ I YN F + + + E LSR +
Sbjct: 293 CGLVAAIPAVIIYNVFSRAIAGYKGILGDASTEVLRHLSRDLD 335
>gi|93005964|ref|YP_580401.1| MotA/TolQ/ExbB proton channel [Psychrobacter cryohalolentis K5]
gi|92393642|gb|ABE74917.1| MotA/TolQ/ExbB proton channel [Psychrobacter cryohalolentis K5]
Length = 246
Score = 187 bits (475), Expect = 1e-45, Method: Composition-based stats.
Identities = 65/217 (29%), Positives = 110/217 (50%), Gaps = 3/217 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
++I L Q L V+ ++ LL + S+LSW +I + S T R ++FE FWSG+ L
Sbjct: 5 LNIIDLITQASLLVQIVMALLLLASLLSWVIIFRMSARLGTARNFDQQFEAWFWSGEDLA 64
Query: 71 TVCKSLKNHH-NIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+ + ++ GL IF SE+ + K + I D ++R + V + R+ +
Sbjct: 65 KLYQGIQGSPERQGLEQIFYVGFSEYLRMHKKR-QPKDDIIDGVERKLRVGLGRQQLLLE 123
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCV 188
L+ L S+ S VG+ G V G+M F ++ + ++ PGI E+LI+ +GL
Sbjct: 124 SGLTTLASIGSVAPYVGLFGTVWGIMNAFLGLSQNEQATLAAVAPGIAEALIATAMGLFA 183
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ +AYN F S + F +E + +L R+T
Sbjct: 184 AIPAVLAYNHFTAKSSRLYDSRALFCDEMTGMLQRET 220
>gi|13473530|ref|NP_105098.1| exbB, uptake of enterochelin; tonB-dependent uptake of B colicins
[Mesorhizobium loti MAFF303099]
gi|14024280|dbj|BAB50884.1| ExbB [Mesorhizobium loti MAFF303099]
Length = 249
Score = 187 bits (475), Expect = 1e-45, Method: Composition-based stats.
Identities = 43/220 (19%), Positives = 95/220 (43%), Gaps = 1/220 (0%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
D+S + +F+ + VK ++ L S+++W++ + KS+ + + + R +
Sbjct: 17 PHDLSPWGMFIAADIIVKAVMIGLAFASLVTWTIWLAKSLEILGGKLRIRRAVRAIGDAA 76
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+L+ ++L G + + + G+++R+ + A
Sbjct: 77 TLKQASRALGRSGGPGALLVKAAEEETALSAGALDHVGGDGLKERVTSRLSRIEAAASRR 136
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
++ L ++ S VG+ G V G+M F I+ + N+ V PGI E+L++ +GL
Sbjct: 137 MSRGTGVLATIGSTAPFVGLFGTVWGIMNAFIGISQAQTTNLAVVAPGIAEALLATAMGL 196
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ + YN F + + + ++SR +
Sbjct: 197 VAAIPAVVIYNVFARSIAGYRQILADASAGVERLVSRDLD 236
>gi|240851192|ref|YP_002972595.1| biopolymer transport protein ExbB [Bartonella grahamii as4aup]
gi|240268315|gb|ACS51903.1| biopolymer transport protein ExbB [Bartonella grahamii as4aup]
Length = 294
Score = 186 bits (474), Expect = 1e-45, Method: Composition-based stats.
Identities = 54/268 (20%), Positives = 104/268 (38%), Gaps = 49/268 (18%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
D S F++FM VK +I +L + S++SW++ K + +R+ R QL + Q
Sbjct: 17 AHDFSPFSMFMAADWVVKAVIIILLLASLMSWTIAFVKIIEITLAKRRVRHELQLVLNAQ 76
Query: 68 SLETVCKSLKNHHNIG-------LAAIFMS--------------------AMSEWKKSCD 100
+L + SLK G L +++S E ++ +
Sbjct: 77 TLTRLAASLKESKGAGVFFLKEVLKEVYLSTQQVHFSAPEGINKSSGERTGARESAQTIE 136
Query: 101 ---------------------KGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMS 139
+ G+++R+ ++ + + + L ++
Sbjct: 137 DILFYEESNQYEDVSRDVRDVRARDVHEGLKERVHSLLSRCLLAATRRVACGSTVLATIG 196
Query: 140 SAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNK 198
+ VG+ V G+M F IA + + V PGI E+L + +GL V+IP+ + YN
Sbjct: 197 AIAPFVGLFATVWGIMNSFIGIAQSQTTRLDVVAPGIAEALFATAIGLFVAIPAVVMYNS 256
Query: 199 FIEDSKKFAMQMEGFANEFSAILSRQTE 226
+ + + A +LSR+ +
Sbjct: 257 LMRALNGYRNDLGDIAAALERLLSRELD 284
>gi|291618145|ref|YP_003520887.1| ExbB [Pantoea ananatis LMG 20103]
gi|291153175|gb|ADD77759.1| ExbB [Pantoea ananatis LMG 20103]
gi|327394543|dbj|BAK11965.1| biopolymer transport ExbB protein [Pantoea ananatis AJ13355]
Length = 250
Score = 186 bits (474), Expect = 1e-45, Method: Composition-based stats.
Identities = 50/216 (23%), Positives = 100/216 (46%), Gaps = 3/216 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
+ + I ++ Q + + + +L I S++SWSVI+ K + +++ + LFWS +
Sbjct: 1 MNEFGIEHVWEQGDIITRSVAIILLIMSVMSWSVIVIKCIQGAGMKKIAHRTKHLFWSQK 60
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSE--WKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
+L +L + N + ++ + + + + G + + I D + R + +I
Sbjct: 61 TLPAAIDTLGANGNNPFRDLAIAGHAAMSHQYTIEAGISNNLDISDWLARALKNSIDDSA 120
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILL 184
+ L L S+ S VG+LG V G+ QSI+ ++ + G + E+LI
Sbjct: 121 ANLQSGLGILASIGSTAPFVGLLGTVWGIYHALQSISMADQPDLAHVAGPVGEALIMTAF 180
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAI 220
GL V+IP+ + +N ++ + FAN+ A
Sbjct: 181 GLFVAIPAVLGFNTISRRNRALQHAIARFANDLHAY 216
>gi|253997472|ref|YP_003049536.1| MotA/TolQ/ExbB proton channel [Methylotenera mobilis JLW8]
gi|253984151|gb|ACT49009.1| MotA/TolQ/ExbB proton channel [Methylotenera mobilis JLW8]
Length = 249
Score = 186 bits (474), Expect = 1e-45, Method: Composition-based stats.
Identities = 51/215 (23%), Positives = 94/215 (43%), Gaps = 3/215 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
+ + + G + +L + S+ SW I+ KS+ R ++ + FW SL
Sbjct: 6 EFNSWEFITAGGPVSMLVALILLVMSVASWYFIVTKSIAVWRTRSAYKAYLAAFWQAPSL 65
Query: 70 ETVCKSLKNHHNIGLAAIFMSAM--SEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
K + G+A + A+ +E KS A + + + R M+ +I E
Sbjct: 66 AAAVKQGQQVSATGMARLAEKAVQAAEHHKSHAAKAVDIVAQDEFVARAMNRSITEEAAN 125
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGL 186
+ L+ L S+ S VG+ G V G+ SI+ + + G + E+LI GL
Sbjct: 126 MEGGLTVLASVGSVSPFVGLFGTVWGIYHALASISLSGQATLDKVAGPVGEALIMTAFGL 185
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
V+IP+ +AYN + ++ + ++E F E ++
Sbjct: 186 AVAIPAVLAYNAIVRSNRALSAELEKFGYELHTLI 220
>gi|293604394|ref|ZP_06686801.1| biopolymer transporter ExbB [Achromobacter piechaudii ATCC 43553]
gi|292817271|gb|EFF76345.1| biopolymer transporter ExbB [Achromobacter piechaudii ATCC 43553]
Length = 312
Score = 186 bits (474), Expect = 1e-45, Method: Composition-based stats.
Identities = 56/220 (25%), Positives = 100/220 (45%), Gaps = 5/220 (2%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
D+ Q K + +L + S+++W +I+ K+ + +++R++ +F FW+
Sbjct: 63 TPDMGFLHFVAQSDFVGKSLFIILILMSLVTWYLILVKAASNVSMRKRSADFLNKFWNAS 122
Query: 68 SLETVCKSL----KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAR 123
SLE V + LA+ M A + K D + R M I
Sbjct: 123 SLEQVEHEISTHGARDPFSHLASHAMHAQAHHNKFGATKLEESGSNSDFVTRTMRKVIDE 182
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISI 182
E ++ L+ L S+ S VG+ G V G+ I + I G + E+LI
Sbjct: 183 ETAKLENGLTVLASVGSTAPFVGLFGTVWGVYHALVGIGLSDGVTINRIAGPVGEALIMT 242
Query: 183 LLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
LGL V+IP+ +AYN F+ +++ F +++ FA++ A L+
Sbjct: 243 GLGLAVAIPAVLAYNTFVRNNRVFLSRLDAFAHDLFAFLT 282
>gi|254250436|ref|ZP_04943755.1| Biopolymer transport protein [Burkholderia cenocepacia PC184]
gi|124879570|gb|EAY66926.1| Biopolymer transport protein [Burkholderia cenocepacia PC184]
Length = 312
Score = 186 bits (474), Expect = 2e-45, Method: Composition-based stats.
Identities = 49/233 (21%), Positives = 95/233 (40%), Gaps = 14/233 (6%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YGL AL+ + ++ LL + S+ SW ++I K V + + ++
Sbjct: 76 NPYGLG-------ALWANGDFVARFVLGLLVVMSLGSWYIMITKFVEQARANGRAKSADE 128
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
W+ +L L + E + D + ID ++ +I
Sbjct: 129 QVWNAPTLAEGAAQLDDASPF---RFIAENAIEAGEHHDTALLDSVDRNTWIDLNIERSI 185
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLI 180
+ + L+FLG++ S VG+ G V G+ +I ++ + G + E+LI
Sbjct: 186 TSVSNRLQDGLAFLGTVGSTAPFVGLFGTVWGIYHALTAIGIAGQASIDKVAGPVGEALI 245
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL---SRQTEGNIS 230
+GL V++P+ + YN + +K ++ F + +L R+ G I+
Sbjct: 246 MTAIGLAVAVPAVLGYNFLVRRNKSVMERVRDFGAQLHTVLLAGGRRAAGGIA 298
>gi|227326942|ref|ZP_03830966.1| biopolymer transport protein [Pectobacterium carotovorum subsp.
carotovorum WPP14]
Length = 230
Score = 186 bits (474), Expect = 2e-45, Method: Composition-based stats.
Identities = 46/213 (21%), Positives = 95/213 (44%), Gaps = 4/213 (1%)
Query: 16 LFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKS 75
++ VK ++ L + S+++W++ KSV +R+ R ++L+ ++
Sbjct: 1 MYQHADAVVKTVMIGLLLASVITWAIFFSKSVEMSGAKRRLRREYLALEQAKTLDDALET 60
Query: 76 LKNHHNIGLA-AIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSF 134
+A + + A +E + S + GI++R ++ +A + +
Sbjct: 61 ADAFKAGSVAQQLLVDAQNELELSAR--SDDNNGIKERTAFRLERRVAATGRHMGRGNGY 118
Query: 135 LGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSS 193
L ++ + VG+ G V G+M F IA + N+ V PGI E+L++ +GL +IP+
Sbjct: 119 LATVGAVAPFVGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGIAEALLATAIGLVAAIPAV 178
Query: 194 IAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+ YN F + + A + + SR +
Sbjct: 179 VIYNVFARSIASYKAMVGDVAAQVLLLQSRDLD 211
>gi|91977799|ref|YP_570458.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris BisB5]
gi|91684255|gb|ABE40557.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris BisB5]
Length = 294
Score = 186 bits (474), Expect = 2e-45, Method: Composition-based stats.
Identities = 52/221 (23%), Positives = 108/221 (48%), Gaps = 4/221 (1%)
Query: 7 AIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG 66
+ ++S + +F+Q + VK ++ L S+++W++ I K + R + R +
Sbjct: 64 GLAELSPWTMFLQADIVVKAVMVGLAFASVITWTIFIAKKIELGRARWRLRSALKQIAES 123
Query: 67 QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
+SL +L + ++ L ++ +A+ E + S G S GI++R+ + E
Sbjct: 124 RSLSEAQLALGDSDHL-LTSLVTAAVREARLSA--GIASDSGIKERVASSFSEIVRAEAR 180
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLG 185
+ + FL S+ + +G+ G V G+M F I+ + N+ V PGI E+L++ +G
Sbjct: 181 HMRHGMGFLASIGATAPFIGLFGTVWGIMNSFIGISKSQTTNLAVVAPGIAEALLATAIG 240
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
L +IP+ + YN F +++ + + + +LSR +
Sbjct: 241 LVAAIPAVLIYNHFTRETRVYLELVSRASGAVGRLLSRDLD 281
>gi|242240997|ref|YP_002989178.1| tonB-system energizer ExbB [Dickeya dadantii Ech703]
gi|242133054|gb|ACS87356.1| tonB-system energizer ExbB [Dickeya dadantii Ech703]
Length = 304
Score = 186 bits (473), Expect = 2e-45, Method: Composition-based stats.
Identities = 44/222 (19%), Positives = 98/222 (44%), Gaps = 2/222 (0%)
Query: 6 LAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS 65
L MD+S+ ++ + VK ++ L + S+++W++ + KS + ++ + + R
Sbjct: 65 LMRMDLSVMGMYQHADVVVKTVMIGLVVASVITWAIFLSKSASLMSAKNRIRREHLALED 124
Query: 66 GQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
+L+ +A + ++ + GI++R + +A
Sbjct: 125 ASTLDDAADIAAVFKPGSVALQLLDDARN-EQMLSARSDDNNGIKERTAFRFERRVAATG 183
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILL 184
++ +L ++ + +G+ G V G+M F IA + N+ V PGI E+L++ +
Sbjct: 184 RQMGRGTGYLATVGAIAPFIGLFGTVWGIMNSFIGIAHTQTTNLAVVAPGIAEALLATAI 243
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
GL +IP+ + YN F + + + A + + SR +
Sbjct: 244 GLIAAIPAVVIYNIFARWTTSYKAIVGDVAAQVLLLQSRDLD 285
>gi|170690046|ref|ZP_02881213.1| MotA/TolQ/ExbB proton channel [Burkholderia graminis C4D1M]
gi|170144481|gb|EDT12642.1| MotA/TolQ/ExbB proton channel [Burkholderia graminis C4D1M]
Length = 238
Score = 186 bits (473), Expect = 2e-45, Method: Composition-based stats.
Identities = 55/236 (23%), Positives = 96/236 (40%), Gaps = 22/236 (9%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
M +YGLA ++ + I+ +LFI SILSW+VI+ K + + ++R +
Sbjct: 1 MQHYGLA-------NVWQSGDFITRAILGILFIMSILSWTVIVVKLWHVLRIKRVTGRTD 53
Query: 61 QLFWSGQSLETVCKSLKNHHNIGLAAIFMS--------------AMSEWKKSCDKGARSP 106
FW + E ++L G A + + + +
Sbjct: 54 AQFWQADNFEHGLRNLGGLAGHGSEASAEALRDNPLLALAMAASEAAAHHRDTRPHLQDR 113
Query: 107 IGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYS 166
I + D I R + +I + + L+ L S+ S VG+ G V G+ I
Sbjct: 114 IDVSDWIARRLQGSIDDAVAHMQSGLAVLASIGSTAPFVGLFGTVWGIYHALIVIGETGQ 173
Query: 167 NNVVSIPG-IIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
++ + G + ESLI GL V+IP+ + YN +K +++ FA+ A
Sbjct: 174 ASIDHVAGPVGESLIMTAFGLFVAIPAVLGYNGLTRANKSIVTRLKRFAHGLHAYF 229
>gi|209885841|ref|YP_002289698.1| ExbB [Oligotropha carboxidovorans OM5]
gi|209874037|gb|ACI93833.1| ExbB [Oligotropha carboxidovorans OM5]
Length = 308
Score = 186 bits (473), Expect = 2e-45, Method: Composition-based stats.
Identities = 51/220 (23%), Positives = 103/220 (46%), Gaps = 4/220 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
D+S + +FMQ + VK ++ L S+L+W++ K ++++ + + + +
Sbjct: 80 PHDLSPWGMFMQADIVVKLVMIGLAFASLLTWTICFAKLREQYVMQKRLKAALRAVSNSR 139
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+L +L + + L++ A+ E + S G GI++R + E
Sbjct: 140 TLAEARMALGSGKTV-LSSFLAMAVHELRMS--SGIVGDAGIKERAASLFAEVTRSEARR 196
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
+ + L ++ + VG+ G V G+M F I+ + N+ V PGI E+L++ LGL
Sbjct: 197 MRLGMGVLATIGATAPFVGLFGTVWGIMNSFIGISKSQTTNLAVVAPGIAEALLATALGL 256
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ I YN F ++++ + + +LSR +
Sbjct: 257 VAAIPAVIIYNHFTRVTRRYMEYVNQASGSAGRLLSRDLD 296
>gi|255588558|ref|XP_002534642.1| Biopolymer transport exbB protein, putative [Ricinus communis]
gi|223524846|gb|EEF27737.1| Biopolymer transport exbB protein, putative [Ricinus communis]
Length = 240
Score = 186 bits (472), Expect = 2e-45, Method: Composition-based stats.
Identities = 55/224 (24%), Positives = 93/224 (41%), Gaps = 11/224 (4%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
M+ YGL L+ Q +A++ I +L SI SWSVI+ KS+ F LRR E
Sbjct: 1 MHAYGL-------LHLWQQGDIAMRAIAMILLAMSIASWSVIVVKSLEFSRLRRLATHAE 53
Query: 61 QLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMS--EWKKSCDKGARSPIGIQDRIDRMMD 118
Q FW E + L L + + + + + D + R +
Sbjct: 54 QQFWHADDFEAAMRGLGA-PGTPLHELACAGQAAVALHDANRGRLIDCVDPSDWLLRNLK 112
Query: 119 VAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIE 177
+I + L+ L S+ S VG+ G V G+ + + + G + E
Sbjct: 113 SSIDESTSRLQRGLAVLASIGSTAPFVGLFGTVWGIYHALLMLGTGGQARIDQVAGPVGE 172
Query: 178 SLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+LI GL V+IP+ + YN ++ +++ FA+ ++L
Sbjct: 173 ALIMTAFGLFVAIPAVLGYNGLTRLNRDIVVRLNRFAHALHSLL 216
>gi|213619068|ref|ZP_03372894.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Typhi str. E98-2068]
Length = 182
Score = 186 bits (472), Expect = 3e-45, Method: Composition-based stats.
Identities = 51/173 (29%), Positives = 86/173 (49%), Gaps = 3/173 (1%)
Query: 56 FREFEQLFWSGQSLETVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRI 113
FE FWSG L + + + + G IF S E+ + + +P + +
Sbjct: 1 AEAFEDKFWSGIELSRLYQESQGRRDSLSGSEQIFYSGFKEFVRLHRANSHAPEAVVEGA 60
Query: 114 DRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSI 172
R M +++ RELE + + FLG++ S +G+ G V G+M F ++ + +
Sbjct: 61 SRAMRISMNRELETLETHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMVA 120
Query: 173 PGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
PGI E+LI+ +GL +IP+ +AYN+ + K + + F EF+AIL RQ
Sbjct: 121 PGIAEALIATAIGLFAAIPAVMAYNRLNQRVNKLELNYDNFMEEFTAILHRQA 173
>gi|46201556|ref|ZP_00054804.2| COG0811: Biopolymer transport proteins [Magnetospirillum
magnetotacticum MS-1]
Length = 235
Score = 186 bits (472), Expect = 3e-45, Method: Composition-based stats.
Identities = 53/219 (24%), Positives = 97/219 (44%), Gaps = 5/219 (2%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
+I + + Q + + +L S+ SWSVI + V I + R + FWS +
Sbjct: 8 TEIGLAHFWEQGDIVSHTVAIILAFLSVASWSVIALRFVAQIRVNRSVDGALETFWSAPT 67
Query: 69 LETVCKSLKNHHNIG----LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARE 124
LE + + G LA I + A + ++G S + + + R M + R
Sbjct: 68 LEEAVERMTRRDYSGILAGLARIGVEAARIHAQHEERGIGSGVSSSEFLTRAMRNYMVRS 127
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISIL 183
+ L+FL S+ S +G+ G V G+ ++G + + G + E+L+
Sbjct: 128 QARLESGLTFLASVGSTAPFIGLFGTVWGIFHALVGLSGATQVVLDKVAGPVGEALVMTA 187
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
GL V+IP+ +AYN ++ ++GFA++ A L+
Sbjct: 188 AGLFVAIPAVLAYNALNRANRLIGAYLDGFAHDLHAFLT 226
>gi|144897126|emb|CAM73990.1| MotA/TolQ/ExbB proton channel family protin [Magnetospirillum
gryphiswaldense MSR-1]
Length = 208
Score = 186 bits (472), Expect = 3e-45, Method: Composition-based stats.
Identities = 58/169 (34%), Positives = 93/169 (55%), Gaps = 4/169 (2%)
Query: 6 LAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS 65
+A D+S++ LFMQ VK ++ L S W++I K + +L ++ +FE+ FWS
Sbjct: 13 VAAHDMSMWGLFMQADFIVKTVMIALLASSFWCWAIIFDKLLRLRSLSQRAEQFEESFWS 72
Query: 66 GQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGA----RSPIGIQDRIDRMMDVAI 121
G SLE + + ++AIF +AM EW++S KG + + + RIDR+M V +
Sbjct: 73 GGSLEELYDRIGARPLDPMSAIFAAAMREWRRSAAKGLTERETARVSLPQRIDRVMHVTL 132
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
RE++ + L L S+ S LVG+ G V G+M FQSIA + ++
Sbjct: 133 GREMDTLERNLGVLASVGSTAPLVGLFGTVWGIMNSFQSIAASKNTSLA 181
>gi|33600966|ref|NP_888526.1| MotA/TolQ/ExbB proton channel family protein [Bordetella
bronchiseptica RB50]
gi|33575401|emb|CAE32478.1| MotA/TolQ/ExbB proton channel family protein [Bordetella
bronchiseptica RB50]
Length = 325
Score = 186 bits (472), Expect = 3e-45, Method: Composition-based stats.
Identities = 56/218 (25%), Positives = 97/218 (44%), Gaps = 5/218 (2%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+ Q K + +L + S+++W +I+ K+V + +R++ F FW+ SL
Sbjct: 84 DMGFLHFVAQSDFVGKTLFIILIVMSLVTWYLIVVKAVGNMGMRKRAAHFLNKFWNASSL 143
Query: 70 ETVCKSL----KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
E V + LA+ M A K + + R M I E
Sbjct: 144 EQVENEIVTHGARDPFSHLASHAMHAQQHHAKFGATKLEESGSNGEFVSRTMRKVIDEET 203
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILL 184
++ L+ L S+ S VG+ G V G+ I + I G + E+LI L
Sbjct: 204 AKLENGLTVLASVGSTAPFVGLFGTVWGVYHALVGIGLSDGVTINRIAGPVGEALIMTGL 263
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
GL V+IP+ +AYN F+ +++ F +++ FA++ A L+
Sbjct: 264 GLAVAIPAVLAYNAFVRNNRVFLSRLDAFAHDLFAFLT 301
>gi|114326703|ref|YP_743860.1| tolQ protein [Granulibacter bethesdensis CGDNIH1]
gi|114314877|gb|ABI60937.1| tolQ protein [Granulibacter bethesdensis CGDNIH1]
Length = 316
Score = 186 bits (472), Expect = 3e-45, Method: Composition-based stats.
Identities = 59/224 (26%), Positives = 101/224 (45%), Gaps = 5/224 (2%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
D+S+ A+F L VK ++ L SIL+W++++ K + RR R + +
Sbjct: 91 PHDLSVQAMFHNADLVVKAVMLGLVAASILTWTILLAKGIEIAGARRSLRRDLSEAMAER 150
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
SL T+ A+ +A E S D+ GIQ+R+ + A
Sbjct: 151 SLATLQARQHGRGMSPGVAMVNAAAEEIIASGDRTG----GIQERVVSRLRRLEAAYGRR 206
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
I FL ++ + +G+ G V G+M F I+ ++ N+ V PGI E+L++ GL
Sbjct: 207 IGRGTGFLATIGATSPFIGLFGTVWGIMNSFIGISQSHTTNLAVVAPGIAEALLATATGL 266
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
+IP+ + YN F + + Q+ + I+SR +G S
Sbjct: 267 VAAIPAVVIYNSFARITGGYRAQLTDLTAAVTRIVSRDLDGQRS 310
>gi|329851101|ref|ZP_08265858.1| exbB [Asticcacaulis biprosthecum C19]
gi|328839947|gb|EGF89519.1| exbB [Asticcacaulis biprosthecum C19]
Length = 289
Score = 186 bits (472), Expect = 3e-45, Method: Composition-based stats.
Identities = 58/225 (25%), Positives = 105/225 (46%), Gaps = 7/225 (3%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
D++ ++F + VK ++ LL + S+ SW ++I K ++F +L R F + + +S
Sbjct: 62 TDVNFVSMFSGATIVVKIVMILLVVMSLFSWILLIMKLLDFSSLNRVSSNFLEAYRGARS 121
Query: 69 LETVCKSL--KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQD----RIDRMMDVAIA 122
+ + + LA + E + S G + +D R + + A
Sbjct: 122 IADINRIAVSDEFAGNPLADMAAVGTEEVQLSKQAGLQVSGEHRDSTLSRAEASIHAVQA 181
Query: 123 RELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLIS 181
+ ++ LSFL + S +G+ G V G+M F IA + N+ V PGI E+L++
Sbjct: 182 GLAKRLSGGLSFLATTGSTSPFIGLFGTVYGIMNSFIGIANSNTTNLAVVAPGIAEALMA 241
Query: 182 ILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+GL +IP+ + YN F + ++ E F +E LSRQ +
Sbjct: 242 TGIGLIAAIPAVVMYNIFNTSISNYGIRSEQFVSELMNSLSRQLD 286
>gi|329905535|ref|ZP_08274158.1| MotA/TolQ/ExbB proton channel family protein [Oxalobacteraceae
bacterium IMCC9480]
gi|327547569|gb|EGF32371.1| MotA/TolQ/ExbB proton channel family protein [Oxalobacteraceae
bacterium IMCC9480]
Length = 238
Score = 186 bits (472), Expect = 3e-45, Method: Composition-based stats.
Identities = 53/218 (24%), Positives = 86/218 (39%), Gaps = 8/218 (3%)
Query: 3 NYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQL 62
YGL +L+ Q + +K + LL S+ SW VII + V + LRR
Sbjct: 5 PYGLE-------SLWQQGDIVIKAVALLLIAMSVASWFVIITRGVQLLRLRRSAALVGLR 57
Query: 63 FWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIA 122
FW S+ + L + A SA + + D + + I
Sbjct: 58 FWDASSMAQGVERLGRDNPFAELAQAGSAAMAHHATHQGHLHDQLSKSDWVTMSLRQGID 117
Query: 123 RELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLIS 181
+ + ++ L S+ S VG+ G V G+ +I + + G + ESLI
Sbjct: 118 DAAGRLQQGMAVLASVGSTAPFVGLFGTVWGIYHALVAIGTSGQAGIDKVAGPVGESLIM 177
Query: 182 ILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
LGL V+IP++ YN + +K Q+ F + A
Sbjct: 178 TALGLAVAIPATFGYNALVRGNKSTLAQLNKFGFDLHA 215
>gi|33597122|ref|NP_884765.1| MotA/TolQ/ExbB proton channel family protein [Bordetella
parapertussis 12822]
gi|33566573|emb|CAE37830.1| MotA/TolQ/ExbB proton channel family protein [Bordetella
parapertussis]
Length = 325
Score = 185 bits (471), Expect = 3e-45, Method: Composition-based stats.
Identities = 56/218 (25%), Positives = 97/218 (44%), Gaps = 5/218 (2%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+ Q K + +L + S+++W +I+ K+V + +R++ F FW+ SL
Sbjct: 84 DMGFLHFVAQSDFVGKTLFIILIVMSLVTWYLIVVKAVGNMGMRKRAAHFLNKFWNASSL 143
Query: 70 ETVCKSL----KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
E V + LA+ M A K + + R M I E
Sbjct: 144 EQVENEIVTHGARDPFSHLASHAMHAQQHHAKFGATKLEESGSNGEFVSRTMRKVIDEET 203
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILL 184
++ L+ L S+ S VG+ G V G+ I + I G + E+LI L
Sbjct: 204 AKLENGLTVLASVGSTAPFVGLFGTVWGVYHALVGIGLSDGVTINRIAGPVGEALIMTGL 263
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
GL V+IP+ +AYN F+ +++ F +++ FA++ A L+
Sbjct: 264 GLAVAIPAVLAYNAFVRNNRVFLSRLDAFAHDLFAFLT 301
>gi|217979261|ref|YP_002363408.1| MotA/TolQ/ExbB proton channel [Methylocella silvestris BL2]
gi|217504637|gb|ACK52046.1| MotA/TolQ/ExbB proton channel [Methylocella silvestris BL2]
Length = 247
Score = 185 bits (471), Expect = 3e-45, Method: Composition-based stats.
Identities = 55/221 (24%), Positives = 104/221 (47%), Gaps = 4/221 (1%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
+S LF Q VK ++ +L + S W+VI K + L+++ + +G
Sbjct: 15 HGLSPIELFSQSDTIVKSVMIILILASAWGWAVIFDKLIRLHLLQKRADKLIASIQAGLP 74
Query: 69 LETVCKSLKNHHNI-GLAAIFMSAMSEWKKSCD--KGARSPIGIQDRIDRMMDVAIAREL 125
+ +V +S + ++ + + E +S + + +Q+R+ R+ +A L
Sbjct: 75 IASVAESFQQAAGTDPFVTVYKAMVEEHSRSAELTQSEGQRDSLQERVHRVGQLASINAL 134
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILL 184
+ + +L L ++ + VG+ G V G+M FQ IA + ++ V PGI E+L + L
Sbjct: 135 DHLQSRLPGLATIGAVAPFVGLFGTVWGIMTSFQGIAASNNTSLAVVAPGIAEALFATAL 194
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
GL +IP+ + YN+ D ++ ++ F F LSRQ
Sbjct: 195 GLVAAIPAVVFYNRIGADIGRYGKRLNAFIGVFEVELSRQL 235
>gi|33594403|ref|NP_882047.1| MotA/TolQ/ExbB proton channel family protein [Bordetella pertussis
Tohama I]
gi|5777376|emb|CAB53384.1| ExbB protein [Bordetella pertussis]
gi|33564478|emb|CAE43791.1| MotA/TolQ/ExbB proton channel family protein [Bordetella pertussis
Tohama I]
gi|332383814|gb|AEE68661.1| MotA/TolQ/ExbB proton channel family protein [Bordetella pertussis
CS]
Length = 325
Score = 185 bits (471), Expect = 3e-45, Method: Composition-based stats.
Identities = 56/218 (25%), Positives = 96/218 (44%), Gaps = 5/218 (2%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+ Q K + +L + S+++W +I+ K V + +R++ F FW+ SL
Sbjct: 84 DMGFLHFVAQSDFVGKTLFIILIVMSLVTWYLIVVKVVGNMGMRKRAAHFLNKFWNASSL 143
Query: 70 ETVCKSL----KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
E V + LA+ M A K + + R M I E
Sbjct: 144 EQVENEIVTHGARDPFSHLASHAMHAQQHHAKFGATKLEESGSNGEFVSRTMRKVIDEET 203
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILL 184
++ L+ L S+ S VG+ G V G+ I + I G + E+LI L
Sbjct: 204 AKLENGLTVLASVGSTAPFVGLFGTVWGVYHALVGIGLSDGVTINRIAGPVGEALIMTGL 263
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
GL V+IP+ +AYN F+ +++ F +++ FA++ A L+
Sbjct: 264 GLAVAIPAVLAYNAFVRNNRVFLSRLDAFAHDLFAFLT 301
>gi|213420649|ref|ZP_03353715.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Typhi str. E01-6750]
Length = 179
Score = 185 bits (471), Expect = 3e-45, Method: Composition-based stats.
Identities = 51/170 (30%), Positives = 86/170 (50%), Gaps = 3/170 (1%)
Query: 59 FEQLFWSGQSLETVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRM 116
FE FWSG L + + + + G IF S E+ + + +P + + R
Sbjct: 1 FEDKFWSGIELSRLYQESQGRRDSLSGSEQIFYSGFKEFVRLHRANSHAPEAVVEGASRA 60
Query: 117 MDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGI 175
M +++ RELE + + FLG++ S +G+ G V G+M F ++ + + PGI
Sbjct: 61 MRISMNRELETLETHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMVAPGI 120
Query: 176 IESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
E+LI+ +GL +IP+ +AYN+ + K + + F EF+AIL RQ
Sbjct: 121 AEALIATAIGLFAAIPAVMAYNRLNQRVNKLELNYDNFMEEFTAILHRQA 170
>gi|298487360|ref|ZP_07005408.1| MotA/TolQ/ExbB proton channel family protein [Pseudomonas
savastanoi pv. savastanoi NCPPB 3335]
gi|298158163|gb|EFH99235.1| MotA/TolQ/ExbB proton channel family protein [Pseudomonas
savastanoi pv. savastanoi NCPPB 3335]
Length = 255
Score = 185 bits (471), Expect = 3e-45, Method: Composition-based stats.
Identities = 53/202 (26%), Positives = 103/202 (50%), Gaps = 5/202 (2%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLA 85
+I LL IFS+ +W + + K V F L+ Q R+F + FW+ SL++ + L A
Sbjct: 27 AVIWLLVIFSVATWGLALLKGVQFSRLKSQDRKFHKQFWAASSLDSAAQ-LAQEQPGAAA 85
Query: 86 AIFMSAMSEWKK---SCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAG 142
+ ++ + + + I QDR++R + I RE + L+ L S+ S
Sbjct: 86 RVALAGYAAIQVPDGAQANDLSQSINHQDRLERALRQQIVRERRSLETGLAILASIGSTS 145
Query: 143 LLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIPSSIAYNKFIE 201
+G+ G V G+M + I+ S ++ ++ G I +L++ +G+ V++P+ + YN F+
Sbjct: 146 PFIGLFGTVWGIMSALKGISAAGSASLETVAGPIGAALVATGVGIAVAVPAVLVYNYFLR 205
Query: 202 DSKKFAMQMEGFANEFSAILSR 223
K A ++ FA++F ++ +
Sbjct: 206 RLKLTAADLDDFAHDFYSLAQK 227
>gi|254255297|ref|ZP_04948613.1| Biopolymer transport protein [Burkholderia dolosa AUO158]
gi|124901034|gb|EAY71784.1| Biopolymer transport protein [Burkholderia dolosa AUO158]
Length = 299
Score = 185 bits (471), Expect = 4e-45, Method: Composition-based stats.
Identities = 49/221 (22%), Positives = 89/221 (40%), Gaps = 11/221 (4%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YGL AL+ + ++ LL + S+ SW +++ K V R+ R +
Sbjct: 70 NPYGLG-------ALWKNGDFVARFVLLLLVVMSMGSWYIMVTKFVEQYRANRRARHADD 122
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
W+ SL K L A E D+ + ID ++ A
Sbjct: 123 NLWAAPSLADGVKQLDEASPFRFIAQTAIEAGEH---HDEALLEAVDRNTWIDVSIERAT 179
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLI 180
+ + L+FL ++ S VG+ G V G+ +I ++ + G + E+LI
Sbjct: 180 TSVSNRLQDGLAFLATVGSTSPFVGLFGTVWGIYHALTAIGIAGQASIDKVAGPVGEALI 239
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+GL V++P+ + YN + +K ++ F + +L
Sbjct: 240 MTAIGLAVAVPAVLGYNFLVRRNKSVMERVRAFGAQLHTVL 280
>gi|319780847|ref|YP_004140323.1| tonB-system energizer ExbB [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317166735|gb|ADV10273.1| tonB-system energizer ExbB [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 323
Score = 185 bits (471), Expect = 4e-45, Method: Composition-based stats.
Identities = 49/221 (22%), Positives = 97/221 (43%), Gaps = 3/221 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
D+S + +FM + VK ++ L S+++W++ + KS+ + + R +
Sbjct: 91 PHDLSPWGMFMAADIVVKAVMIGLAFASLVTWTIWLAKSLELFGGKLRIRRAVRAIGEAA 150
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGAR-SPIGIQDRIDRMMDVAIARELE 126
+L+ +L G A + +A E S S G+++R+ + A
Sbjct: 151 TLKQAGSTLDRSGGPG-ALLVRAAEEETALSAGALDHVSGDGLKERVTSRLSRIEAAAAR 209
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLG 185
++ L ++ S VG+ G V G+M F I+ + N+ V PGI E+L++ +G
Sbjct: 210 RMSRGTGVLATIGSTAPFVGLFGTVWGIMNAFIGISQAQTTNLAVVAPGIAEALLATAMG 269
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
L +IP+ + YN F + + + ++SR +
Sbjct: 270 LVAAIPAVVIYNVFARSIAGYRQILADASAGVERLVSRDLD 310
>gi|122042274|gb|ABM65817.1| ExbB [Mesorhizobium sp. R88B]
Length = 334
Score = 185 bits (471), Expect = 4e-45, Method: Composition-based stats.
Identities = 49/221 (22%), Positives = 98/221 (44%), Gaps = 3/221 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
D+S + +FM + VK ++ L S+++W++ + KS+ + + R +
Sbjct: 102 PHDLSPWGMFMAADIIVKAVMIGLAFASLVTWTIWLAKSLEIFGGKLRIRRAVRAIGDAA 161
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGAR-SPIGIQDRIDRMMDVAIARELE 126
+L+ ++L G A + +A E S S G+++R+ + A
Sbjct: 162 TLKQASRALDRSGGPG-ALLVKAAQDETALSAGALDHVSGDGLKERVSSRLSRIEAAASR 220
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLG 185
++ L ++ S VG+ G V G+M F I+ + N+ V PGI E+L++ +G
Sbjct: 221 RMSRGTGVLATIGSTAPFVGLFGTVWGIMNAFIGISQAQTTNLAVVAPGIAEALLATAMG 280
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
L +IP+ + YN F + + + ++SR +
Sbjct: 281 LVAAIPAVVIYNVFARSIAGYRQILADASAGVERLVSRDLD 321
>gi|3916254|gb|AAC78851.1| ExbB [Bordetella bronchiseptica]
Length = 314
Score = 185 bits (470), Expect = 4e-45, Method: Composition-based stats.
Identities = 56/218 (25%), Positives = 97/218 (44%), Gaps = 5/218 (2%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+ Q K + +L + S+++W +I+ K+V + +R++ F FW+ SL
Sbjct: 73 DMGFLHFVAQSDFVGKTLFVILIVMSLVTWYLIVVKAVGNMGMRKRAAHFLNKFWNASSL 132
Query: 70 ETVCKSL----KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
E V + LA+ M A K + + R M I E
Sbjct: 133 EQVENEIVTHGARDPFSHLASHAMHAQQHHAKFGATKLEESGSNGEFVSRTMRKVIDEET 192
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILL 184
++ L+ L S+ S VG+ G V G+ I + I G + E+LI L
Sbjct: 193 AKLENGLTVLASVGSTAPFVGLFGTVWGVYHALVGIGLSDGVTINRIAGPVGEALIMTGL 252
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
GL V+IP+ +AYN F+ +++ F +++ FA++ A L+
Sbjct: 253 GLAVAIPAVLAYNAFVRNNRVFLSRLDAFAHDLFAFLT 290
>gi|78066476|ref|YP_369245.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. 383]
gi|77967221|gb|ABB08601.1| outer membrane transport energization protein ExbB [Burkholderia
sp. 383]
Length = 304
Score = 185 bits (470), Expect = 4e-45, Method: Composition-based stats.
Identities = 46/221 (20%), Positives = 90/221 (40%), Gaps = 11/221 (4%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YGL AL+ + ++ LL I S+ SW ++I K + + R+ + +
Sbjct: 73 NPYGLG-------ALWKNGDFVARFVLILLVIMSMGSWYIMITKFLEQLRANRRAKLADA 125
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
W+ SL + L E + + + ID ++ +I
Sbjct: 126 QLWTAPSLAEGARLLDEASPF---RFIAETAIEAGEHHEDALLEAVDRNTWIDVSVERSI 182
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLI 180
+ + L+FL ++ S VG+ G V G+ +I ++ + G + E+LI
Sbjct: 183 TNVSNRMQDGLAFLATVGSTAPFVGLFGTVWGIYHALTAIGIAGQASIDKVAGPVGEALI 242
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+GL V++P+ + YN + +K ++ F + +L
Sbjct: 243 MTAIGLAVAVPAVLGYNFLVRRNKSVMERVRNFGAQLHTVL 283
>gi|89901943|ref|YP_524414.1| MotA/TolQ/ExbB proton channel [Rhodoferax ferrireducens T118]
gi|89346680|gb|ABD70883.1| MotA/TolQ/ExbB proton channel [Rhodoferax ferrireducens T118]
Length = 301
Score = 185 bits (470), Expect = 5e-45, Method: Composition-based stats.
Identities = 50/221 (22%), Positives = 99/221 (44%), Gaps = 12/221 (5%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YG AL+ + ++ LL I S+ SW ++I K + + RQ + +
Sbjct: 85 NPYGFE-------ALWKTSDAVARTVLLLLLIMSVGSWYIMIVKVLEQAKMGRQAKAAAR 137
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
FWS +++ +L+ + FM+ + +G I + D I + A+
Sbjct: 138 DFWSADTVQQGAAALEANSPFR----FMAEAATTAVKKHEGLMGHIPLNDWIAMRIQRAV 193
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLI 180
R L+FL ++ S VG+ G V G+ +I ++ + G + E+L+
Sbjct: 194 DRIQSNTQGGLAFLATVGSISPFVGLFGTVWGIYHALTAIGISGQASIDKVAGPVGEALL 253
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+GL V++P+ +AYN + +K ++ F+++ A++
Sbjct: 254 MTAIGLAVAVPAVLAYNWLVRRNKAVMDEVRAFSSDLHAVV 294
>gi|70731074|ref|YP_260815.1| tolQ protein [Pseudomonas fluorescens Pf-5]
gi|68345373|gb|AAY92979.1| tolQ protein [Pseudomonas fluorescens Pf-5]
Length = 236
Score = 185 bits (470), Expect = 5e-45, Method: Composition-based stats.
Identities = 61/223 (27%), Positives = 108/223 (48%), Gaps = 3/223 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+SI+ L L VK ++ L + S+LSW +IIQ+ ++F+ F Q F + L
Sbjct: 8 MSIWGLISDASLLVKAVMLTLLLASLLSWYLIIQRGAVLRGREQRFQAFIQRFRAAPELL 67
Query: 71 TVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ + + + G+ IF + E+ + + G+ + ++R + VAI+ + +
Sbjct: 68 PLYREVAKGSDAEGGVEPIFAAGYQEFSHLRGQPGGAGEGVLEGVERALYVAISEQETRL 127
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
+ L FL ++ S +G+ G V G+M F ++ + PGI E+LI+ +GL
Sbjct: 128 EKGLQFLATVGSVSPYIGLFGTVWGIMNSFLGLSQVQQATLSTVAPGIAEALIATAIGLF 187
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
+IP+ IAYN+F S+ + F NE L R +G S
Sbjct: 188 AAIPAVIAYNRFSARSQTLLTRYYAFGNELQVRLHRTLQGTPS 230
>gi|330945627|gb|EGH47117.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. pisi str.
1704B]
Length = 229
Score = 185 bits (470), Expect = 5e-45, Method: Composition-based stats.
Identities = 50/209 (23%), Positives = 97/209 (46%), Gaps = 5/209 (2%)
Query: 16 LFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKS 75
L+ Q + + + L + SI SW V++ K V R + + + FWS +L+ +
Sbjct: 11 LWQQADVVTRGVALTLLVMSIASWYVMVDKLVRLALHRLRSPKLLEAFWSAPTLKDGVQQ 70
Query: 76 LKNHHNIGLAAIFMSAMSEWKKSCD--KGARSPIGIQDRIDRMMDVAIARELEEITEKLS 133
L +H A + + +S ++ D G P + ++R + A ++ ++
Sbjct: 71 LGHH--SAYAELTQAGVSAARQHRDALDGDMHPPAFSEWLNRALRQATLTVGGQLQGGMA 128
Query: 134 FLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIPS 192
L ++ S+ VG+LG V G+ I ++ + G + E+LI LGL V+IP+
Sbjct: 129 ILATVGSSAPFVGLLGTVWGIYHALMKIGLTGDASIDKVAGPVGETLIMTALGLAVAIPA 188
Query: 193 SIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
++ YN + +K+ ++ FA E +L
Sbjct: 189 TLGYNLLVRSNKQTLAELGKFAFELHDLL 217
>gi|167841809|ref|ZP_02468493.1| MotA/TolQ/ExbB proton channel [Burkholderia thailandensis MSMB43]
Length = 299
Score = 185 bits (469), Expect = 5e-45, Method: Composition-based stats.
Identities = 48/221 (21%), Positives = 92/221 (41%), Gaps = 11/221 (4%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YGL AL+ + ++ LL I S+ SW +++ K + + R+ + +
Sbjct: 70 NPYGLG-------ALWKNGDFVARFVLILLVIMSMGSWYIMVTKFLEQLRANRRAKLADA 122
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
WS SL K L E + D+ + ID ++ +I
Sbjct: 123 QLWSAPSLAEGAKLLDEASPF---RFIAETAIEASEHHDEALLEAVDRNTWIDVSVERSI 179
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLI 180
+ + L+FL ++ S VG+ G V G+ +I ++ + G + E+LI
Sbjct: 180 TNVSNRMQDGLAFLATVGSTAPFVGLFGTVWGIHHALTAIGIAGQASIDKVAGPVGEALI 239
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+ +GL V++P+ + YN + +K ++ F + +L
Sbjct: 240 TTAIGLAVAVPAVLGYNFLVRRNKSMMERVRNFGAQLHTVL 280
>gi|192292067|ref|YP_001992672.1| tonB-system energizer ExbB [Rhodopseudomonas palustris TIE-1]
gi|192285816|gb|ACF02197.1| tonB-system energizer ExbB [Rhodopseudomonas palustris TIE-1]
Length = 316
Score = 185 bits (469), Expect = 6e-45, Method: Composition-based stats.
Identities = 48/221 (21%), Positives = 92/221 (41%), Gaps = 3/221 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
D+S +FM VK ++ L + S LSW++ + K+V + + + +
Sbjct: 79 PHDLSPIGMFMAADWVVKAVMIALLLASFLSWTICVAKTVELACANARAKRAFLIVDRSR 138
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCD-KGARSPIGIQDRIDRMMDVAIARELE 126
L+ L + + SA E +S +G+++R+ + A+
Sbjct: 139 DLDEAVHRLSKRGGPAV-FMVRSASEELHRSLPVLAYSGEVGLKERVVSRLARIEAQAGR 197
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLG 185
+ L ++ + VG+ G V G+M F I+ ++ N+ V PGI E+L++ G
Sbjct: 198 RLMRGTGLLATVGAVSPFVGLFGTVWGIMNAFIGISQSHTTNLAVVAPGIAEALLATAFG 257
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
L +IP+ I YN F + + A ++S +
Sbjct: 258 LVAAIPAVIIYNVFARAISGYRQVLADAAVGVERLISLDLD 298
>gi|94967626|ref|YP_589674.1| MotA/TolQ/ExbB proton channel [Candidatus Koribacter versatilis
Ellin345]
gi|94549676|gb|ABF39600.1| Cell division and transport-associated protein TolQ [Candidatus
Koribacter versatilis Ellin345]
Length = 235
Score = 185 bits (469), Expect = 6e-45, Method: Composition-based stats.
Identities = 51/214 (23%), Positives = 100/214 (46%), Gaps = 7/214 (3%)
Query: 15 ALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCK 74
+LF GL + ++ +L +FS+ SWS+++ K F + Q F + F Q ++ V
Sbjct: 16 SLFSNTGLVARAVLLILMLFSLFSWSIVVAKWSLFRRAKVQSGRFVRAFRKAQRMQDVAA 75
Query: 75 SLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSF 134
+ L ++F A E ++ + P I R +A + EL + +L +
Sbjct: 76 VAEQFKPSPLVSVFEGAYEELRR------QGPRLNVTSIQRSTQIAASEELTRLERRLPW 129
Query: 135 LGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSS 193
L + + +G+ G V G++ F + + + PGI E+LI+ GL ++P+
Sbjct: 130 LATTGAVTPFIGLFGTVWGIIDAFHGLGDAGAATLRAVAPGISEALITTAAGLFAAVPAV 189
Query: 194 IAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEG 227
I YN ++ + ++F +M+ F+ E + R +
Sbjct: 190 IFYNMYMNNIREFGARMDDFSLELLNTVERGSNA 223
>gi|289675543|ref|ZP_06496433.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. syringae
FF5]
gi|330976688|gb|EGH76731.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. aptata str.
DSM 50252]
Length = 242
Score = 185 bits (469), Expect = 6e-45, Method: Composition-based stats.
Identities = 50/209 (23%), Positives = 97/209 (46%), Gaps = 5/209 (2%)
Query: 16 LFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKS 75
L+ Q + + + L + SI SW V++ K V R + + + FWS +L+ +
Sbjct: 11 LWQQADVVTRGVALTLLVMSIASWYVMVDKLVRLALHRLRSPKLLEAFWSAPTLKDGVQQ 70
Query: 76 LKNHHNIGLAAIFMSAMSEWKKSCD--KGARSPIGIQDRIDRMMDVAIARELEEITEKLS 133
L +H A + + +S ++ D G P + ++R + A ++ ++
Sbjct: 71 LGHH--SAYAELTQAGVSAARQHRDALDGDMHPPAFSEWLNRALRQATLTVGGQLQGGMA 128
Query: 134 FLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIPS 192
L ++ S+ VG+LG V G+ I ++ + G + E+LI LGL V+IP+
Sbjct: 129 ILATVGSSAPFVGLLGTVWGIYHALMKIGLTGDASIDKVAGPVGETLIMTALGLAVAIPA 188
Query: 193 SIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
++ YN + +K+ ++ FA E +L
Sbjct: 189 TLGYNLLVRSNKQTLAELGKFAFELHDLL 217
>gi|167647543|ref|YP_001685206.1| MotA/TolQ/ExbB proton channel [Caulobacter sp. K31]
gi|167349973|gb|ABZ72708.1| MotA/TolQ/ExbB proton channel [Caulobacter sp. K31]
Length = 299
Score = 185 bits (469), Expect = 6e-45, Method: Composition-based stats.
Identities = 60/228 (26%), Positives = 107/228 (46%), Gaps = 7/228 (3%)
Query: 6 LAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS 65
+ ++ +F+ VK ++ L + S+ SW ++I K F L +Q +F + F
Sbjct: 69 MKSHSLTPIGMFLSAQAVVKVVMIGLILASVFSWVLLITKLFEFGALNKQSDKFLEAFRG 128
Query: 66 GQSLETVCK--SLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQD----RIDRMMDV 119
+S+ + + S + +A + +A E + S G +D R ++
Sbjct: 129 ARSIADIARIGSSEEFEGNPMADMAAAAAQEVELSRQAGLAVGGEHRDSTLSRATYAINA 188
Query: 120 AIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIES 178
A ++ ++ + FL S+ SAG +G+ G V G+M F IA + N+ V PGI E+
Sbjct: 189 VQASLVKRLSGGMVFLASVGSAGPFIGLFGTVYGIMTSFIGIANTNTTNLAVVAPGIAEA 248
Query: 179 LISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
L++ +GL +IP+ I YN F + + EGF E +SRQ +
Sbjct: 249 LLATGIGLFAAIPAVIFYNFFQTRISGYGTRSEGFVAELMNAISRQLD 296
>gi|329115466|ref|ZP_08244215.1| Biopolymer transport protein ExbB [Acetobacter pomorum DM001]
gi|326695244|gb|EGE46936.1| Biopolymer transport protein ExbB [Acetobacter pomorum DM001]
Length = 271
Score = 185 bits (469), Expect = 6e-45, Method: Composition-based stats.
Identities = 57/216 (26%), Positives = 104/216 (48%), Gaps = 4/216 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
S + +F+ G V+C++ LL + S+L+W++ I KSV F+++RR+ + E+ +L
Sbjct: 36 FSPWEMFLNAGSVVQCVMILLALASLLTWTIFIAKSVEFLSVRRKLKTAEKTLEEAGTLA 95
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
+S N + M+A +E S D G+++RI ++ A E +
Sbjct: 96 LGERS--TRPNSIAHTLVMAAETEKAVSYDIP-NDNEGLKERIVLHLERLEAAEGRRLMR 152
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVS 189
L ++ + +G+ G V G+M F IA + ++ V PGI E+L++ LGL +
Sbjct: 153 GTGLLATIGATSPFIGLFGTVWGIMTSFTGIAASKATSLAVVAPGIAEALLATALGLVAA 212
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
IP+ + YN S Q+ + ++SR
Sbjct: 213 IPAVVIYNHLARQSASCRAQVADLTSLVMRLVSRDL 248
>gi|238025555|ref|YP_002909787.1| MotA/TolQ/ExbB proton channel [Burkholderia glumae BGR1]
gi|237880220|gb|ACR32552.1| MotA/TolQ/ExbB proton channel [Burkholderia glumae BGR1]
Length = 303
Score = 185 bits (469), Expect = 6e-45, Method: Composition-based stats.
Identities = 47/221 (21%), Positives = 90/221 (40%), Gaps = 11/221 (4%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YGL AL+ + ++ LL I S+ SW ++I K + + R+ + +Q
Sbjct: 74 NPYGLG-------ALWKGGDFVARFVLVLLVIMSMGSWYIMITKFLEQVRANRRAKHADQ 126
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
W+ SL K L E + + + ID ++ I
Sbjct: 127 QLWTAPSLNEGVKLLDEASPF---RFLTETAIEAGEHHQEALLEAVDRNTWIDASVERGI 183
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLI 180
+ + L+FL ++ S VG+ G V G+ +I ++ + G + E+LI
Sbjct: 184 TNVSNRLQDGLAFLATVGSTAPFVGLFGTVWGIYHALTAIGIAGQASIDKVAGPVGEALI 243
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+GL V++P+ + YN + +K ++ F + ++
Sbjct: 244 MTAIGLAVAVPAVLGYNFLVRRNKTVMERVRNFGAQLHTVV 284
>gi|170697552|ref|ZP_02888642.1| MotA/TolQ/ExbB proton channel [Burkholderia ambifaria IOP40-10]
gi|170137575|gb|EDT05813.1| MotA/TolQ/ExbB proton channel [Burkholderia ambifaria IOP40-10]
Length = 312
Score = 185 bits (469), Expect = 6e-45, Method: Composition-based stats.
Identities = 49/233 (21%), Positives = 96/233 (41%), Gaps = 14/233 (6%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YGL AL+ + ++ LL + S+ SW ++I K V + + ++
Sbjct: 76 NPYGLG-------ALWANGDFVARFVLGLLVVMSLGSWYIMITKFVEQARANGRAKSADE 128
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
W+ +L L + E + D + ID ++ +I
Sbjct: 129 QVWNAPTLAEGAAQLDDASPF---RFIAENAIEAGEHHDTALLDSVDRNTWIDLNIERSI 185
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLI 180
+ + L+FLG++ S VG+ G V G+ +I ++ + G + E+LI
Sbjct: 186 TSVSNRLQDGLAFLGTVGSTAPFVGLFGTVWGIYHALTAIGIAGQASIDKVAGPVGEALI 245
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL---SRQTEGNIS 230
+GL V++P+ + YN + +K ++ F + +L R+ G+I+
Sbjct: 246 MTAIGLAVAVPAVLGYNFLVRRNKSVMERVRDFGAQLHTVLLAGGRRAAGSIA 298
>gi|78065826|ref|YP_368595.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. 383]
gi|77966571|gb|ABB07951.1| outer membrane transport energization protein ExbB [Burkholderia
sp. 383]
Length = 262
Score = 185 bits (469), Expect = 7e-45, Method: Composition-based stats.
Identities = 46/218 (21%), Positives = 92/218 (42%), Gaps = 11/218 (5%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YGL AL+ + + +L + S+ SW +I+ K + + R+ + E
Sbjct: 30 NPYGLD-------ALWKGGDFIARGTLLILVVMSMGSWYIIVAKLLEQARVLRRAKAAET 82
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
FW SL K L I + ++ + + + + + ++ A
Sbjct: 83 GFWKAGSLSEGTKKLDT--GSPFRFIAETGLAAFDH-HEGALVEQVDLNQWVAAAIERAT 139
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLI 180
+ + L+FLG++ S +G+ G V G+ +I ++ + G + E+LI
Sbjct: 140 TSVSSRLQDGLAFLGTVGSTAPFIGLFGTVWGIYHALTAIGIAGQASIDKVAGPVGEALI 199
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFS 218
+GL V++P+ + YN + +K ++ GF+ E
Sbjct: 200 MTAIGLAVAVPAVLGYNWLVRRNKAVMERVRGFSTELH 237
>gi|89899921|ref|YP_522392.1| MotA/TolQ/ExbB proton channel [Rhodoferax ferrireducens T118]
gi|89344658|gb|ABD68861.1| MotA/TolQ/ExbB proton channel [Rhodoferax ferrireducens T118]
Length = 286
Score = 184 bits (468), Expect = 7e-45, Method: Composition-based stats.
Identities = 50/221 (22%), Positives = 101/221 (45%), Gaps = 12/221 (5%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YGL AL+ K ++ LL I S+ SW ++I K + + RQ + +
Sbjct: 70 NPYGLE-------ALWKTSDAVAKTVLLLLLIMSVGSWYIMIVKVLEQAKMGRQAKAAVK 122
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
FW+ +++ ++L+ + FM+ + +G I + D + + A+
Sbjct: 123 NFWTAGTVQQGAEALEKNSPFR----FMADAATNAIKKHEGLMGHIPLNDWMAMGIQRAV 178
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLI 180
R L+FL ++ S VG+ G V G+ +I ++ + G + E+L+
Sbjct: 179 DRIQSNTQGGLAFLATVGSISPFVGLFGTVWGIYHALTAIGISGQASIDKVAGPVGEALL 238
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+GL V++P+ +AYN + +K ++ F+++ A++
Sbjct: 239 MTAIGLAVAVPAVLAYNWLVRRNKAVMDEVRAFSSDLHAVV 279
>gi|66047724|ref|YP_237565.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. syringae
B728a]
gi|63258431|gb|AAY39527.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. syringae
B728a]
Length = 242
Score = 184 bits (468), Expect = 7e-45, Method: Composition-based stats.
Identities = 49/209 (23%), Positives = 96/209 (45%), Gaps = 5/209 (2%)
Query: 16 LFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKS 75
L+ Q + + + L + SI SW V++ K V R + + + FW+ +L+ +
Sbjct: 11 LWQQADVVTRGVALTLLVMSIASWYVMVDKLVRLALHRLRSPKLLEAFWNAPTLKDGVQQ 70
Query: 76 LKNHHNIGLAAIFMSAMSEWKKSCDK--GARSPIGIQDRIDRMMDVAIARELEEITEKLS 133
L +H A + + +S ++ D G P + + R + A ++ ++
Sbjct: 71 LGHH--SAYAELTQAGVSAARQHRDALNGDMHPPAFSEWLTRALRQATLTVGGQLQGGMA 128
Query: 134 FLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIPS 192
L ++ S+ VG+LG V G+ I ++ + G + E+LI LGL V+IP+
Sbjct: 129 ILATVGSSAPFVGLLGTVWGIYHALMKIGLTGDASIDKVAGPVGETLIMTALGLAVAIPA 188
Query: 193 SIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
++ YN + +K+ ++ FA E +L
Sbjct: 189 TLGYNLLVRSNKQTLAELGKFAFELHDLL 217
>gi|171318720|ref|ZP_02907862.1| MotA/TolQ/ExbB proton channel [Burkholderia ambifaria MEX-5]
gi|171096087|gb|EDT41014.1| MotA/TolQ/ExbB proton channel [Burkholderia ambifaria MEX-5]
Length = 312
Score = 184 bits (468), Expect = 7e-45, Method: Composition-based stats.
Identities = 49/233 (21%), Positives = 95/233 (40%), Gaps = 14/233 (6%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YGL AL+ + ++ LL + S+ SW ++I K V + + ++
Sbjct: 76 NPYGLG-------ALWANGDFVARFVLGLLVVMSLGSWYIMITKFVEQARANGRAKSADE 128
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
W+ +L L + E + D + ID ++ +I
Sbjct: 129 QVWNAPTLAEGAAQLDDASPF---RFIAENAIEAGEHHDTALLDSVDRNTWIDLNIERSI 185
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLI 180
+ + L+FLG++ S VG+ G V G+ +I ++ + G + E+LI
Sbjct: 186 TSVSNRLQDGLAFLGTVGSTAPFVGLFGTVWGIYHALTAIGIAGQASIDKVAGPVGEALI 245
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL---SRQTEGNIS 230
+GL V++P+ + YN + +K ++ F + +L R+ G I+
Sbjct: 246 MTAIGLAVAVPAVLGYNFLVRRNKSVMERVRDFGAQLHTVLLAGGRRAAGGIA 298
>gi|299770153|ref|YP_003732179.1| putative biopolymer transport protein (ExbB-like) [Acinetobacter
sp. DR1]
gi|298700241|gb|ADI90806.1| putative biopolymer transport protein (ExbB-like) [Acinetobacter
sp. DR1]
Length = 244
Score = 184 bits (468), Expect = 7e-45, Method: Composition-based stats.
Identities = 49/202 (24%), Positives = 100/202 (49%), Gaps = 5/202 (2%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLA 85
I LL FSI++W +I+ K V RQ + F + FWS ++L+ + + +A
Sbjct: 11 GTIWLLVAFSIVTWGLIVIKLVQTQKANRQSKAFAEEFWSAKNLQDAIQKSEAGEG-PVA 69
Query: 86 AIFMSAMSEWKKSCD---KGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAG 142
I + + D + + QD ++R + I E ++ + + L S+ +
Sbjct: 70 RIANTGFKTLADADDDTHQDLQHSWSRQDLLERHLRKQILSERRQLEKGSALLASIGNNA 129
Query: 143 LLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIPSSIAYNKFIE 201
+G+ G V G++ Q+IA + ++ + G I E+L++ +G+ V++P+ +AYN F+
Sbjct: 130 PFIGLFGTVFGIIHALQAIAHSGNASMDVVAGPIGEALVATGIGIAVAVPAVLAYNYFVR 189
Query: 202 DSKKFAMQMEGFANEFSAILSR 223
K +++ FA +F ++ +
Sbjct: 190 KVKTIGAELDDFATDFVSLNQK 211
>gi|311105153|ref|YP_003978006.1| MotA/TolQ/ExbB proton channel family protein 1 [Achromobacter
xylosoxidans A8]
gi|310759842|gb|ADP15291.1| MotA/TolQ/ExbB proton channel family protein 1 [Achromobacter
xylosoxidans A8]
Length = 331
Score = 184 bits (468), Expect = 7e-45, Method: Composition-based stats.
Identities = 56/218 (25%), Positives = 99/218 (45%), Gaps = 5/218 (2%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+ Q K + +L + S+++W +I+ K + +++R++ +F FW+ SL
Sbjct: 84 DMGFMHFIAQSDFVGKSLFIILILMSLVTWYLILVKVASNVSMRKRSADFLNKFWNASSL 143
Query: 70 ETVCKSL----KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
E V + LA+ M A + K D + R M I E
Sbjct: 144 EQVENEIVTHGARDPFSHLASHAMHAQAHHNKFGATKLEEAGSNTDFVTRTMRKVIDEET 203
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILL 184
++ L+ L S+ S VG+ G V G+ I + I G + E+LI L
Sbjct: 204 AKLENGLTVLASVGSTAPFVGLFGTVWGVYHALVGIGLSDGVTINRIAGPVGEALIMTGL 263
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
GL V+IP+ +AYN F+ +++ F +++ FA++ A L+
Sbjct: 264 GLAVAIPAVLAYNTFVRNNRVFLSRLDAFAHDLFAFLT 301
>gi|241761366|ref|ZP_04759454.1| MotA/TolQ/ExbB proton channel [Zymomonas mobilis subsp. mobilis
ATCC 10988]
gi|260753281|ref|YP_003226174.1| MotA/TolQ/ExbB proton channel [Zymomonas mobilis subsp. mobilis
NCIMB 11163]
gi|283856201|ref|YP_161896.2| MotA/TolQ/ExbB proton channel protein [Zymomonas mobilis subsp.
mobilis ZM4]
gi|241374273|gb|EER63770.1| MotA/TolQ/ExbB proton channel [Zymomonas mobilis subsp. mobilis
ATCC 10988]
gi|258552644|gb|ACV75590.1| MotA/TolQ/ExbB proton channel [Zymomonas mobilis subsp. mobilis
NCIMB 11163]
gi|283775197|gb|AAV88785.2| MotA/TolQ/ExbB proton channel [Zymomonas mobilis subsp. mobilis
ZM4]
Length = 236
Score = 184 bits (468), Expect = 8e-45, Method: Composition-based stats.
Identities = 64/229 (27%), Positives = 108/229 (47%), Gaps = 5/229 (2%)
Query: 3 NYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQL 62
N LA +S LF+ + + ++ LL SI SW++I + R R FE+
Sbjct: 9 NADLASSVLSPVTLFLHADMVGRLVMILLLCASIGSWALIFGQFFRSSAANRASRNFEKA 68
Query: 63 FWSGQSLETVCKSLKNH--HNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVA 120
+ +S+ + + + N A IF++ M K + G +DR+ ++ A
Sbjct: 69 YSKAESMGELERFYDRYFGSNDPSARIFLAGMQTAKSAGK--VIDHEGERDRLSLSLEDA 126
Query: 121 IARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYY-SNNVVSIPGIIESL 179
+A +E+++ LS L ++ S VG+ G V G+M F IA + + PGI E+L
Sbjct: 127 VAAAVEDMSSPLSSLATIGSVSPFVGLFGTVWGIMHSFSQIAAGGNTAMAIVGPGIAEAL 186
Query: 180 ISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
S LGL +IP+SIAYN+ +F ++ F++ LSR +
Sbjct: 187 FSTALGLFAAIPASIAYNRMSHTIGRFESRLTRFSDRIYITLSRAMDAR 235
>gi|297539697|ref|YP_003675466.1| MotA/TolQ/ExbB proton channel [Methylotenera sp. 301]
gi|297259044|gb|ADI30889.1| MotA/TolQ/ExbB proton channel [Methylotenera sp. 301]
Length = 247
Score = 184 bits (467), Expect = 9e-45, Method: Composition-based stats.
Identities = 54/214 (25%), Positives = 98/214 (45%), Gaps = 2/214 (0%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
+ + A G + +L S+ SW +I+ KS+ +R+ F+ + Q FW+ +L
Sbjct: 6 EFNSLAFITAGGPVSIGVALILLAMSVASWYLIVSKSLQAWRVRQAFKVYAQHFWNAPNL 65
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
K LA ++A +E K+ + + + R ++ +IA E ++
Sbjct: 66 AVAMKQNNKTALASLAKNAIAA-AEHHKTHVSKNSEKVAQDEFVARALNRSIAEENTKME 124
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCV 188
LS L S+ S VG+ G V G+ SI+ + + G + E+LI LGL V
Sbjct: 125 NGLSVLASVGSVSPFVGLFGTVWGIYHALASISQSGQATLDKVAGPVGEALIMTALGLAV 184
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
+IP+ +AYN + ++ A ++E F +L+
Sbjct: 185 AIPAVLAYNALVRSNRLLAAELEDFGYTLHTLLT 218
>gi|85715429|ref|ZP_01046411.1| MotA/TolQ/ExbB proton channel [Nitrobacter sp. Nb-311A]
gi|85697850|gb|EAQ35725.1| MotA/TolQ/ExbB proton channel [Nitrobacter sp. Nb-311A]
Length = 335
Score = 184 bits (467), Expect = 9e-45, Method: Composition-based stats.
Identities = 57/227 (25%), Positives = 104/227 (45%), Gaps = 4/227 (1%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
+N + ++S +++F+ + VK ++ L S+++W++ I K V RR
Sbjct: 99 LNPDSASSHELSPWSMFLSADIIVKLVMIGLAFASLVTWTICIAKMVELSLARRNLGTAL 158
Query: 61 QLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVA 120
+ +SL +L + LA++ SAM E + S G S GI++R
Sbjct: 159 REISESRSLAEAQMALGARDGV-LASLLASAMHEARLSA--GISSDAGIKERAASSFAEI 215
Query: 121 IARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESL 179
+ E + + L ++ + VG+ G V G+M F I+ + N+ V PGI E+L
Sbjct: 216 VRAESRRVRLGMGLLATIGATSPFVGLFGTVWGIMNSFIGISKAQTTNLAVVAPGIAEAL 275
Query: 180 ISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
++ LGL +I + I YN F +K + + + +LSR +
Sbjct: 276 LATALGLVAAILAVIIYNHFARVTKGYIELVSRASGSAGRLLSRDLD 322
>gi|317051747|ref|YP_004112863.1| MotA/TolQ/ExbB proton channel [Desulfurispirillum indicum S5]
gi|316946831|gb|ADU66307.1| MotA/TolQ/ExbB proton channel [Desulfurispirillum indicum S5]
Length = 215
Score = 184 bits (467), Expect = 9e-45, Method: Composition-based stats.
Identities = 64/217 (29%), Positives = 106/217 (48%), Gaps = 4/217 (1%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
M+ SI +F K I+ L SI+SW VIIQK + + + F +FWS QS
Sbjct: 1 MEFSIANVFSHADFFGKFIMIFLLGMSIVSWGVIIQKFLYLRNVSQMNDRFLDIFWSNQS 60
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
L V S + + L +F ++ + A ++R++ ++ ++
Sbjct: 61 LSKVTSSAGSM-SAPLLDVFRVTHKNFQALPQETASDEK--VAYVERIVRAESMAKVRDM 117
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
LS L ++S+ +G+LG V G++ F +I S ++ V PG+ E+L++ LGL
Sbjct: 118 ESSLSTLAIIASSAPYIGLLGTVWGIIRSFHTIGAMRSASLAVVAPGLSEALVATALGLF 177
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+IP+ + YN F K+ ME FA+E AIL R+
Sbjct: 178 AAIPAVMFYNVFAARIKQQVSIMESFADELMAILMRK 214
>gi|126463339|ref|YP_001044453.1| MotA/TolQ/ExbB proton channel [Rhodobacter sphaeroides ATCC 17029]
gi|126105003|gb|ABN77681.1| MotA/TolQ/ExbB proton channel [Rhodobacter sphaeroides ATCC 17029]
Length = 363
Score = 184 bits (467), Expect = 1e-44, Method: Composition-based stats.
Identities = 52/221 (23%), Positives = 103/221 (46%), Gaps = 3/221 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
D++ + +F V+ ++ LL S ++W+V++ K V RR+ +
Sbjct: 137 PHDLTPWGMFEAAHWVVQAVMILLAAASFVTWTVLLFKLVEIAIARRRLARTAATVETSA 196
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKS-CDKGARSPIGIQDRIDRMMDVAIARELE 126
+LE V + L + A + ++ E ++S G+++R+ +++ A+ E
Sbjct: 197 TLEEVVRRLSGRKD-PAAFMARASFEELQRSDAALDLAGTAGLKERVRSILERVEAQAGE 255
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLG 185
+ + L ++ S G VG+ G V G+M F I+ + N+ V PGI E+L++ LG
Sbjct: 256 RLRRGIGLLATIGSVGPFVGLFGTVWGIMNAFIGISQSQTTNLAVVAPGIAEALLATGLG 315
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
L +IP+ + YN F+ + + + +LSR +
Sbjct: 316 LVAAIPAVVIYNHFVRSIASWRLSLADAGAAIERMLSRDLD 356
>gi|221640392|ref|YP_002526654.1| MotA/TolQ/ExbB proton channel [Rhodobacter sphaeroides KD131]
gi|221161173|gb|ACM02153.1| MotA/TolQ/ExbB proton channel precursor [Rhodobacter sphaeroides
KD131]
Length = 349
Score = 184 bits (467), Expect = 1e-44, Method: Composition-based stats.
Identities = 51/221 (23%), Positives = 103/221 (46%), Gaps = 3/221 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
D++ + +F V+ ++ LL S ++W+V++ K V RR+ +
Sbjct: 123 PHDLTPWGMFEAAHWVVQAVMILLAAASFVTWTVLLFKLVEIAIARRRLARTAATVETSA 182
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKS-CDKGARSPIGIQDRIDRMMDVAIARELE 126
+L+ V + L + A + ++ E ++S G+++R+ +++ A+ E
Sbjct: 183 TLDEVVRRLSGRKD-PAAFMARASFEELQRSDAALDLAGTAGLKERVRSILERVEAQAGE 241
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLG 185
+ + L ++ S G VG+ G V G+M F I+ + N+ V PGI E+L++ LG
Sbjct: 242 RLRRGIGLLATIGSVGPFVGLFGTVWGIMNAFIGISQSQTTNLAVVAPGIAEALLATGLG 301
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
L +IP+ + YN F+ + + + +LSR +
Sbjct: 302 LVAAIPAVVIYNHFVRSIASWRLSLADAGAAIERMLSRDLD 342
>gi|303246912|ref|ZP_07333188.1| MotA/TolQ/ExbB proton channel [Desulfovibrio fructosovorans JJ]
gi|302491619|gb|EFL51502.1| MotA/TolQ/ExbB proton channel [Desulfovibrio fructosovorans JJ]
Length = 246
Score = 184 bits (467), Expect = 1e-44, Method: Composition-based stats.
Identities = 53/217 (24%), Positives = 95/217 (43%), Gaps = 4/217 (1%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
+ V ++++L S+ WS+I+ K +R+ F +L T
Sbjct: 10 FLGMLSNATPTVLFVLSVLAAMSVGCWSIILVKIFTLTRAKREAARDYVRFQKADTLRTA 69
Query: 73 CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIG---IQDRIDRMMDVAIARELEEIT 129
+ L + A +E + D + D I R++ + EL ++
Sbjct: 70 MRELGESRASPSFHVGRLAFAELVRMEDAPMQPDEKGRVAMDNIRRVLRQGVTEELGNLS 129
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCV 188
+ L FL + ++A +G+ G V G+M F SI S + ++ PGI E+LI+ +GL V
Sbjct: 130 KTLPFLATCANATPFIGLFGTVWGIMNSFHSIGLMQSAALAAVAPGISEALIATAIGLAV 189
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ IAYN F+ + ++ FA F + R+
Sbjct: 190 AIPAVIAYNFFLGYMQTIERELVNFAGAFLNRIQREV 226
>gi|330969777|gb|EGH69843.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. aceris str.
M302273PT]
Length = 227
Score = 183 bits (466), Expect = 1e-44, Method: Composition-based stats.
Identities = 49/209 (23%), Positives = 96/209 (45%), Gaps = 5/209 (2%)
Query: 16 LFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKS 75
L+ Q + + + L + SI SW V++ K V R + + + FW+ +L+ +
Sbjct: 11 LWQQADVVTRGVALTLLVMSIASWYVMVDKLVRLALHRLRSPKLLEAFWNAPTLKDGVQQ 70
Query: 76 LKNHHNIGLAAIFMSAMSEWKKSCDK--GARSPIGIQDRIDRMMDVAIARELEEITEKLS 133
L +H A + + +S ++ D G P + + R + A ++ ++
Sbjct: 71 LGHH--SAYAELTQAGVSAARQHRDALNGDMHPPAFSEWLTRALRQATLTVGGQLQGGMA 128
Query: 134 FLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIPS 192
L ++ S+ VG+LG V G+ I ++ + G + E+LI LGL V+IP+
Sbjct: 129 ILATVGSSAPFVGLLGTVWGIYHALMKIGLTGDASIDKVAGPVGETLIMTALGLAVAIPA 188
Query: 193 SIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
++ YN + +K+ ++ FA E +L
Sbjct: 189 TLGYNLLVRSNKQTLAELGKFAFELHDLL 217
>gi|85715805|ref|ZP_01046784.1| MotA/TolQ/ExbB proton channel [Nitrobacter sp. Nb-311A]
gi|85697458|gb|EAQ35337.1| MotA/TolQ/ExbB proton channel [Nitrobacter sp. Nb-311A]
Length = 319
Score = 183 bits (466), Expect = 1e-44, Method: Composition-based stats.
Identities = 60/221 (27%), Positives = 103/221 (46%), Gaps = 4/221 (1%)
Query: 7 AIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG 66
+ D+S +++FM + VK ++ L S+++W++ I K V RR+
Sbjct: 86 SPHDLSPWSMFMSADIIVKLVMIGLAFASLVTWTICIAKMVELSLARRKLGAALTQIGES 145
Query: 67 QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
+SL +L + LA++ SAM E + S G S GI++R + E
Sbjct: 146 RSLAEAQMALGAKDGV-LASLLASAMHEARLSA--GISSDAGIKERAASNFAEIVRAESR 202
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLG 185
I + L ++ + VG+ G V G+M F I+ + N+ V PGI E+L++ LG
Sbjct: 203 RIRLGMGLLATIGATSPFVGLFGTVWGIMNSFIGISKAQTTNLAVVAPGIAEALLATALG 262
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
L +IP+ I YN F +K + + + +LSR +
Sbjct: 263 LVAAIPAVIIYNHFARVTKGYIELVSRASGSAGRLLSRDLD 303
>gi|319779493|ref|YP_004130406.1| MotA/TolQ/ExbB proton channel family protein [Taylorella
equigenitalis MCE9]
gi|317109517|gb|ADU92263.1| MotA/TolQ/ExbB proton channel family protein [Taylorella
equigenitalis MCE9]
Length = 239
Score = 183 bits (466), Expect = 1e-44, Method: Composition-based stats.
Identities = 41/214 (19%), Positives = 101/214 (47%), Gaps = 7/214 (3%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
MD+S+ +F Q + + +L + S+++W+VII +++ ++ + ++ W+ +
Sbjct: 1 MDLSL--VFKQGDPVLIAVFLILILMSVITWTVIIVRALKLFVVKGKNKKALSRIWASKD 58
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGA---RSPIGIQDRIDRMMDVAIAREL 125
+ V ++ ++ + + + KK I + + + R + +I + +
Sbjct: 59 MSEV-EAFVRKDTSTISNVAENGIDAMKKHTSTDGNFLGREISLDEFVGRGLRNSIKQTM 117
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILL 184
L+ L S+ + +G+ G V G+ +I+ ++ ++ G I E+L++
Sbjct: 118 RRFEGGLTALASIGATAPFIGLFGTVWGIYHALINISAEGQMSIAAVAGPIGEALVATAA 177
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFS 218
GL V+IP+ + YN + +K ++ FA++F
Sbjct: 178 GLFVAIPAVLVYNALVRSNKTLQQDLDAFAHDFY 211
>gi|213970953|ref|ZP_03399075.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. tomato T1]
gi|213924329|gb|EEB57902.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. tomato T1]
Length = 255
Score = 183 bits (465), Expect = 2e-44, Method: Composition-based stats.
Identities = 53/202 (26%), Positives = 103/202 (50%), Gaps = 5/202 (2%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLA 85
+I LL IFS+ +W + + K V F L+ Q R+F + FW+ SL++ + L A
Sbjct: 27 AVIWLLVIFSVATWGLALLKGVQFSRLKAQDRKFHKQFWAASSLDSAAQ-LAQEQPGAAA 85
Query: 86 AIFMSAMSEWKK---SCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAG 142
+ ++ + + + I QDR++R + I RE + L+ L S+ S
Sbjct: 86 RVALAGYAAIQVPDGAQANDLSQSINHQDRLERALRQQIVRERRSLETGLAILASIGSTS 145
Query: 143 LLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIPSSIAYNKFIE 201
+G+ G V G+M + I+ S ++ ++ G I +L++ +G+ V++P+ + YN F+
Sbjct: 146 PFIGLFGTVWGIMSALKGISAAGSASLETVAGPIGAALVATGVGIAVAVPAVLVYNYFLR 205
Query: 202 DSKKFAMQMEGFANEFSAILSR 223
K A ++ FA++F ++ +
Sbjct: 206 RLKLTAADLDDFAHDFYSLAQK 227
>gi|171057502|ref|YP_001789851.1| MotA/TolQ/ExbB proton channel [Leptothrix cholodnii SP-6]
gi|170774947|gb|ACB33086.1| MotA/TolQ/ExbB proton channel [Leptothrix cholodnii SP-6]
Length = 265
Score = 183 bits (465), Expect = 2e-44, Method: Composition-based stats.
Identities = 52/226 (23%), Positives = 90/226 (39%), Gaps = 12/226 (5%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YGL+ AL+ Q K + +L + S+ SW VI K V L +Q
Sbjct: 50 NPYGLS-------ALWAQGDFVAKTTLLILVVMSMASWYVIFTKLVEQSKLNKQAAAARS 102
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
FW ++E L I + S G + + + + AI
Sbjct: 103 NFWEADTVEIGKDKLAA--GSAFRYIAEKGLD--GASKHTGLLGAVDFNEWVTMSLQRAI 158
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLI 180
+ + L+ L ++ S VG+ G V G+ I ++ + G + ESLI
Sbjct: 159 NNVQSRMQDGLAVLATVGSTAPFVGLFGTVWGIYHALVKIGMSGQASIDKVAGPVGESLI 218
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+GL V++P+ + YN + +K ++ F ++ A+L Q +
Sbjct: 219 MTAIGLAVAVPAVLGYNWLVRRNKAVMEEVNAFGSDLHAVLLGQAK 264
>gi|74316730|ref|YP_314470.1| MotA/TolQ/ExbB proton channel family protein [Thiobacillus
denitrificans ATCC 25259]
gi|74056225|gb|AAZ96665.1| MotA/TolQ/ExbB proton channel family protein [Thiobacillus
denitrificans ATCC 25259]
Length = 250
Score = 183 bits (465), Expect = 2e-44, Method: Composition-based stats.
Identities = 51/221 (23%), Positives = 100/221 (45%), Gaps = 5/221 (2%)
Query: 7 AIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG 66
A + Q ++ +L S+++W++I+ KSV +++ R F FW+
Sbjct: 5 APTQLGFAHFIAQADGLAHFLLVVLLAMSVVTWTLIVAKSVGNWRMKQHARAFLAHFWNA 64
Query: 67 QSLETVCKSLKNH----HNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIA 122
L V L+ H L + A +++ + + + R + AI
Sbjct: 65 PGLPAVADHLQKHGVKDPFSHLTHHGLKAAEQYRNRSGQRLIESGSEDEFLTRALRRAIN 124
Query: 123 RELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLIS 181
++ + + L S++S+ VG+ G V G+ +I S ++ + G + E+LI
Sbjct: 125 QDTARLEYGHTMLASIASSAPFVGLFGTVWGIYHALVNIGMSGSGSLDQVAGPVGEALIM 184
Query: 182 ILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
LGL V+IP+ +AYN F ++ +++GFA++ A +S
Sbjct: 185 TALGLAVAIPAVLAYNFFNRARREMLSEVDGFAHDLFAFMS 225
>gi|66045528|ref|YP_235369.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. syringae
B728a]
gi|63256235|gb|AAY37331.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. syringae
B728a]
Length = 255
Score = 183 bits (465), Expect = 2e-44, Method: Composition-based stats.
Identities = 54/202 (26%), Positives = 105/202 (51%), Gaps = 5/202 (2%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLA 85
+I LL IFS+ +W + + K V F L+ Q R+F + FW+ SL++ + L + A
Sbjct: 27 AVIWLLVIFSVATWGLALLKGVQFSRLKSQDRKFHKQFWAASSLDSAAQ-LAHEQPGAAA 85
Query: 86 AIFMSAMSEWKKSCDKGARS---PIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAG 142
+ ++ + + + A I QDR++R + I RE + L+ L S+ S
Sbjct: 86 RVALAGYAAIQVADGAQAHDLSQSINHQDRLERALRQQIVRERRSLETGLAILASIGSTS 145
Query: 143 LLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIPSSIAYNKFIE 201
+G+ G V G+M + I+ S ++ ++ G I +L++ +G+ V++P+ + YN F+
Sbjct: 146 PFIGLFGTVWGIMSALKGISAAGSASLETVAGPIGAALVATGVGIAVAVPAVLVYNYFLR 205
Query: 202 DSKKFAMQMEGFANEFSAILSR 223
K A ++ FA++F ++ +
Sbjct: 206 RLKLTAADLDDFAHDFYSLAQK 227
>gi|239906027|ref|YP_002952766.1| putative protein TolQ [Desulfovibrio magneticus RS-1]
gi|239795891|dbj|BAH74880.1| putative protein TolQ [Desulfovibrio magneticus RS-1]
Length = 255
Score = 183 bits (465), Expect = 2e-44, Method: Composition-based stats.
Identities = 49/217 (22%), Positives = 96/217 (44%), Gaps = 4/217 (1%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
++A+ V ++ +L S+ WS+I K +R + F +L
Sbjct: 10 LWAMMASATPTVIFVLCVLAFMSLGCWSIIFVKFFTLTAAKRDTARDYERFQEADTLRAA 69
Query: 73 CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIG---IQDRIDRMMDVAIARELEEIT 129
++L + + A E + D I R++ ++ EL +++
Sbjct: 70 MQALGQSRHSPAFFVGRMAFEELVRMEQADLDPAEKGHVAMDNIRRVLRQGVSMELAKLS 129
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCV 188
+ L+FL + ++A +G+ G V G+M F SI S + ++ PGI E+L++ +GL V
Sbjct: 130 KNLAFLATTANATPFIGLFGTVWGIMNSFHSIGLQQSAALAAVAPGISEALVATAIGLAV 189
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ +AYN ++ ++ FA F + R+
Sbjct: 190 AIPAVLAYNYYLGFVTSIENELVNFAGAFLNRIQREV 226
>gi|254417731|ref|ZP_05031455.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Brevundimonas sp. BAL3]
gi|196183908|gb|EDX78884.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Brevundimonas sp. BAL3]
Length = 295
Score = 183 bits (465), Expect = 2e-44, Method: Composition-based stats.
Identities = 60/223 (26%), Positives = 103/223 (46%), Gaps = 7/223 (3%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
I+ ++FM+ + VK ++ L + SILSW++++ K F L R+ F + F +++
Sbjct: 70 ITPISMFMEATVIVKVVMIGLLLASILSWTLLLIKLFEFGALNRKTDNFLENFRGARTIA 129
Query: 71 T--VCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQD----RIDRMMDVAIARE 124
+ + LA + +A E + S G D R + +
Sbjct: 130 DMRAVSTQEEFDGNPLADMAAAATEEVEMSRQAGLSVTGDHLDSALGRAQAAVAAVQSGL 189
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISIL 183
++ FL S+ S G VG+ G V G+M F IA + N+ V PGI E+L++
Sbjct: 190 ALRLSGGQQFLASVGSIGPFVGLFGTVYGIMNSFIGIAESNTTNLAVVAPGIAEALLATG 249
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+GL +IP+ + YN F + + +GFA E +SRQ +
Sbjct: 250 IGLFAAIPAVVFYNYFNTRIAAYGTRADGFAAELLNGISRQLD 292
>gi|121605464|ref|YP_982793.1| MotA/TolQ/ExbB proton channel [Polaromonas naphthalenivorans CJ2]
gi|120594433|gb|ABM37872.1| outer membrane transport energization protein ExbB [Polaromonas
naphthalenivorans CJ2]
Length = 242
Score = 183 bits (464), Expect = 2e-44, Method: Composition-based stats.
Identities = 45/220 (20%), Positives = 85/220 (38%), Gaps = 8/220 (3%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
+ ++ Q + K + LL + S+ SW VII K+++ L Q + E FW
Sbjct: 3 TQFGLAHVWSQGDIVTKSVAILLLLMSLASWMVIIIKALDLRRLSAQAKATE-SFWHSAD 61
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGA------RSPIGIQDRIDRMMDVAIA 122
+ + K + + + + R + +I
Sbjct: 62 FADGLSKFGADPANPFRLLALEGREATAHVLHKDGNTKPQLHDALDLSEWVTRSLRNSID 121
Query: 123 RELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLIS 181
+ L+ L S+ S VG+ G V G+ +I ++ + G + ESLI
Sbjct: 122 DITANMQSGLAVLASVGSTAPFVGLFGTVWGIYHALLAIGLNGQASIDKVAGPVGESLIM 181
Query: 182 ILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+GL V+IP+ + YN + +K + ++ FA++ A
Sbjct: 182 TAMGLAVAIPAVLGYNALVRGNKSVSGKLNRFAHDLHAYF 221
>gi|288962267|ref|YP_003452562.1| biopolymer transport protein [Azospirillum sp. B510]
gi|288914533|dbj|BAI76018.1| biopolymer transport protein [Azospirillum sp. B510]
Length = 386
Score = 183 bits (464), Expect = 2e-44, Method: Composition-based stats.
Identities = 50/220 (22%), Positives = 99/220 (45%), Gaps = 4/220 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
D+S + +F+ V+ ++ L + S+++W++ I K+V + +R+ R + +
Sbjct: 141 PHDLSPWGMFVTASPVVQAVMVGLALASVVTWTIAIAKTVELSSAKRKARAALAMLEEAR 200
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
SL + + A + + ++E S D +R G+ DR ++ A
Sbjct: 201 SLSQAAEKVG-FSQGTAATLVRAVLAETHLSADAPSR--EGLMDRAASRLERIEAAAGRR 257
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
+ L ++ S G +G+ G V G+M F I+ + N+ V PGI E+L++ +GL
Sbjct: 258 MARGTGILATIGSTGPFIGLFGTVWGIMTSFIGISRAQTTNLAVVAPGIAEALLATAIGL 317
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ + YN Q+ + +LSR +
Sbjct: 318 VAAIPAVVVYNACSRAIGGHKAQLTDASAAVLRLLSRDID 357
>gi|50084751|ref|YP_046261.1| putative biopolymer transport protein (ExbB-like) [Acinetobacter
sp. ADP1]
gi|49530727|emb|CAG68439.1| putative biopolymer transport protein (ExbB-like) [Acinetobacter
sp. ADP1]
Length = 244
Score = 182 bits (463), Expect = 3e-44, Method: Composition-based stats.
Identities = 48/202 (23%), Positives = 100/202 (49%), Gaps = 5/202 (2%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLA 85
I LL FS+++W +I+ K V RQ + F + FWS ++L+ + + +A
Sbjct: 11 GTIWLLVAFSVVTWGLIVIKLVQTQKADRQSKAFAEEFWSAKNLQDAIQKSEAGQG-PVA 69
Query: 86 AIFMSAMSEWKKSCD---KGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAG 142
I + + D + + QD ++R + I E ++ + + L S+ +
Sbjct: 70 RIANTGFKTLADADDDTHQDLQHSWSRQDLLERHLRKQILSERRQLEKGSALLASIGNNA 129
Query: 143 LLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIPSSIAYNKFIE 201
+G+ G V G++ Q+IA + ++ + G I E+L++ +G+ V++P+ +AYN F+
Sbjct: 130 PFIGLFGTVFGIIHALQAIAHSGNASMDVVAGPIGEALVATGIGIAVAVPAVLAYNYFVR 189
Query: 202 DSKKFAMQMEGFANEFSAILSR 223
K +++ FA +F ++ +
Sbjct: 190 KVKTIGAELDDFATDFVSLNQK 211
>gi|301058352|ref|ZP_07199385.1| protein TolQ [delta proteobacterium NaphS2]
gi|300447588|gb|EFK11320.1| protein TolQ [delta proteobacterium NaphS2]
Length = 267
Score = 182 bits (463), Expect = 3e-44, Method: Composition-based stats.
Identities = 59/238 (24%), Positives = 109/238 (45%), Gaps = 20/238 (8%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
I + G VK ++ +LF FSI +W++I K R + +F +LF+ + ++ +
Sbjct: 24 IIQMIFHAGPMVKFVMLILFFFSITTWAIIFLKFRMLRKARDETDDFLELFYESRDIKKI 83
Query: 73 CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIG-------------------IQDRI 113
+S +A +F + +E+ + P G + D +
Sbjct: 84 YRSSDALKLSPVAQLFRAGYAEFTRFRKMQGSDPDGTSQGGTASQSEYPLRSQQTLMDNL 143
Query: 114 DRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSI 172
+R + A + + + + LSFL + + +G+ G V G+M F SI S N+ V
Sbjct: 144 ERALRKAEIDQNKRLEKALSFLATTGNTAPFIGLFGTVWGIMESFHSIGLKGSANLAVVA 203
Query: 173 PGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
PGI E+L++ GL +IP+ +A+N F + +M+ FA +F +++ RQ S
Sbjct: 204 PGISEALVATAAGLAAAIPAVVAFNYFTQRVVSLRAEMDIFATDFLSMVVRQFFKKPS 261
>gi|330822032|ref|YP_004350894.1| MotA/TolQ/ExbB proton channel [Burkholderia gladioli BSR3]
gi|327374027|gb|AEA65382.1| MotA/TolQ/ExbB proton channel [Burkholderia gladioli BSR3]
Length = 303
Score = 182 bits (463), Expect = 3e-44, Method: Composition-based stats.
Identities = 46/221 (20%), Positives = 90/221 (40%), Gaps = 11/221 (4%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YGL AL+ + ++ LL I S+ SW ++I K + + R+ + ++
Sbjct: 75 NPYGLG-------ALWKGGDFVARFVLVLLVIMSMGSWYIMITKFLEQLRANRRAKHADE 127
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
W+ SL K L E + + + ID ++ I
Sbjct: 128 QLWTAPSLAEGVKLLDEASPF---RFLTETAIEAGEHHQEALLEAVDRNTWIDASVERGI 184
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLI 180
+ + L+FL ++ S VG+ G V G+ +I ++ + G + E+LI
Sbjct: 185 TNVSNRMQDGLAFLATVGSTAPFVGLFGTVWGIYHALTAIGIAGQASIDKVAGPVGEALI 244
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+GL V++P+ + YN + +K ++ F + ++
Sbjct: 245 MTAIGLAVAVPAVLGYNFLVRRNKSVMERVRNFGAQLHTVV 285
>gi|255593120|ref|XP_002535793.1| Biopolymer transport exbB protein, putative [Ricinus communis]
gi|223521926|gb|EEF26588.1| Biopolymer transport exbB protein, putative [Ricinus communis]
Length = 294
Score = 182 bits (462), Expect = 3e-44, Method: Composition-based stats.
Identities = 49/221 (22%), Positives = 89/221 (40%), Gaps = 12/221 (5%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YGL AL+ Q K + +L I S +W +++ K L Q +
Sbjct: 71 NPYGLG-------ALWAQGDFVAKGTLIILVIMSAFTWYIMVTKLWEQQRLISQAGAARR 123
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
W +SL + L N A+ + ++ D I + + + + ++
Sbjct: 124 A-WDAKSLGEGIQKLA--KNSAYRAVAEDGLRA-REHHDGKLTDNIALPEWVTSNVQRSV 179
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLI 180
+ L+FL ++ S VG+ G V G+ +I ++ + G + E+LI
Sbjct: 180 DGINSRMQGGLAFLATVGSTAPFVGLFGTVWGIYHALIAIGLAGQASIDKVAGPVGEALI 239
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+GL V++P+ + YN + SK + FA + A L
Sbjct: 240 MTAIGLAVAVPAVLGYNWLVRRSKVALEDLHAFAEDVQAYL 280
>gi|77459960|ref|YP_349467.1| MotA/TolQ/ExbB proton channel [Pseudomonas fluorescens Pf0-1]
gi|77383963|gb|ABA75476.1| outer membrane transport energization protein ExbB [Pseudomonas
fluorescens Pf0-1]
Length = 234
Score = 182 bits (462), Expect = 4e-44, Method: Composition-based stats.
Identities = 55/208 (26%), Positives = 102/208 (49%), Gaps = 6/208 (2%)
Query: 21 GLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHH 80
+ V ++ L +FS++SW++++ KS ++ + Q ++F + FW L T + +
Sbjct: 7 SMIVPGVLWGLVLFSVVSWAILLVKSAQYLRQKTQNKQFSKAFWGAPDLLTAAEHASQYP 66
Query: 81 NIGLAAIFMSAMS----EWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLG 136
LA I S E + I DR++R + I +E + + L
Sbjct: 67 GS-LARIASSGFEALLVEESPRTTQQLAHTINRSDRLERNLRQQIQKERRSLENGQAILA 125
Query: 137 SMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIPSSIA 195
S+ S +G+ G V G+M QSI S ++ ++ G I +LI+ +G+ V++P+ +
Sbjct: 126 SIGSTAPFIGLFGTVWGIMEALQSIGASGSASLETVAGPIGHALIATGVGIAVAVPAVLI 185
Query: 196 YNKFIEDSKKFAMQMEGFANEFSAILSR 223
YN F+ K + M+ FA++F A+ SR
Sbjct: 186 YNFFLRRLKLASADMDDFAHDFDALASR 213
>gi|91775230|ref|YP_544986.1| MotA/TolQ/ExbB proton channel [Methylobacillus flagellatus KT]
gi|91775374|ref|YP_545130.1| MotA/TolQ/ExbB proton channel [Methylobacillus flagellatus KT]
gi|91709217|gb|ABE49145.1| outer membrane transport energization protein ExbB [Methylobacillus
flagellatus KT]
gi|91709361|gb|ABE49289.1| outer membrane transport energization protein ExbB [Methylobacillus
flagellatus KT]
Length = 249
Score = 182 bits (462), Expect = 4e-44, Method: Composition-based stats.
Identities = 53/223 (23%), Positives = 94/223 (42%), Gaps = 2/223 (0%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
+ + + G + +L S+ SW +++ K +T+R RE+ FW S+
Sbjct: 6 EFNSLDFILDGGPVSILVAVVLVFMSVASWYLMVVKFYQALTIRSANREYSNSFWQASSI 65
Query: 70 ETVCK-SLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
E+ + +A + A + + I R M I+ E E +
Sbjct: 66 ESALRHDSGETIVSRVANQAVDAAEHHQSHVGSNVEDACNKDEFIARAMRRQISAESERL 125
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLC 187
L+ L S+ S VG+ G V G+ SI+ + + G + E+LI LGL
Sbjct: 126 DYGLTMLASVGSVAPFVGLFGTVWGIYHALASISQSGQATLDKVAGPVGEALIMTALGLA 185
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
V+IP+ +AYN + ++ ++E FAN+ +L+ N S
Sbjct: 186 VAIPAVLAYNALVRRNRLILSEVEAFANDLHILLTTGAPLNPS 228
>gi|260467352|ref|ZP_05813525.1| tonB-system energizer ExbB [Mesorhizobium opportunistum WSM2075]
gi|259028879|gb|EEW30182.1| tonB-system energizer ExbB [Mesorhizobium opportunistum WSM2075]
Length = 238
Score = 182 bits (462), Expect = 4e-44, Method: Composition-based stats.
Identities = 48/221 (21%), Positives = 98/221 (44%), Gaps = 3/221 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
D+S + +FM + VK ++ L S+++W++ + KS+ + + + +
Sbjct: 6 PHDLSPWGMFMAADIIVKGVMIGLAFASLVTWTIWLAKSLEILGGKLRISRAVRAIGDAA 65
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGAR-SPIGIQDRIDRMMDVAIARELE 126
+L+ ++L G A + +A E S S G+++R+ + A
Sbjct: 66 TLKQASRALDRSGGPG-ALLVRAAEEETTLSAGALDHVSGDGLKERVASRLSRIEAAASR 124
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLG 185
++ L ++ S VG+ G V G+M F I+ + N+ V PGI E+L++ +G
Sbjct: 125 RMSRGTGVLATIGSTAPFVGLFGTVWGIMNAFIGISQAQTTNLAVVAPGIAEALLATAMG 184
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
L +IP+ + YN F + + + ++SR +
Sbjct: 185 LVAAIPAVVIYNVFARSIAGYRQILADASAGIERLVSRDLD 225
>gi|329113725|ref|ZP_08242500.1| Biopolymer transport protein ExbB [Acetobacter pomorum DM001]
gi|326696988|gb|EGE48654.1| Biopolymer transport protein ExbB [Acetobacter pomorum DM001]
Length = 249
Score = 181 bits (461), Expect = 4e-44, Method: Composition-based stats.
Identities = 52/221 (23%), Positives = 103/221 (46%), Gaps = 4/221 (1%)
Query: 6 LAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS 65
LA + S + +F+ GL V+C++ LL + ++L+W++ I KSV + +R + + E
Sbjct: 4 LAPISFSPWEMFLNAGLVVRCVMVLLAVAALLTWTIFIAKSVELLRVRVKLAKAEHTLEQ 63
Query: 66 GQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
+L+ + + + G+A + A + G+++RI ++ A E
Sbjct: 64 AGTLDLGEEGTRKN---GIAHTLVMAAETERTRSQDIPDDSEGLKERIVLHLERLEAAEG 120
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILL 184
+ L ++ + +G+ G V G+M F IA + ++ V PGI E+L++ L
Sbjct: 121 RRLMRGTGLLATIGATSPFIGLFGTVWGIMTSFTGIAASKATSLAVVAPGIAEALLATAL 180
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
GL +IP+ + YN + Q+ + ++SR
Sbjct: 181 GLVAAIPAVVIYNHLARQTASCRAQVADLTSLVMRLVSRDL 221
>gi|303248658|ref|ZP_07334912.1| MotA/TolQ/ExbB proton channel [Desulfovibrio fructosovorans JJ]
gi|302489914|gb|EFL49840.1| MotA/TolQ/ExbB proton channel [Desulfovibrio fructosovorans JJ]
Length = 248
Score = 181 bits (461), Expect = 4e-44, Method: Composition-based stats.
Identities = 52/217 (23%), Positives = 97/217 (44%), Gaps = 4/217 (1%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
+A+ V ++ +L + S+ WS+I K + +R+ F +L +
Sbjct: 10 FWAMMANATPTVIFVLCVLGVMSLGCWSIIFVKIFTLTSAKRETARDFDRFQEADTLRSA 69
Query: 73 CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIG---IQDRIDRMMDVAIARELEEIT 129
+SL + A E + D I R++ +++EL +++
Sbjct: 70 MQSLGQSRQSPAFNVGRLAFEELVRMEQADLDPAEKGHIAMDNIRRVLRQGVSQELAKLS 129
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCV 188
L FL + ++A +G+ G V G+M F SI S + ++ PGI E+LI+ +GL V
Sbjct: 130 SSLPFLATSANATPFIGLFGTVWGIMNSFHSIGLMQSAALAAVAPGISEALIATAIGLAV 189
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ I+YN F+ + ++ FA F + R+
Sbjct: 190 AIPAVISYNFFLGYIQAIEGELVNFAGAFLNRIQREV 226
>gi|291613856|ref|YP_003524013.1| MotA/TolQ/ExbB proton channel [Sideroxydans lithotrophicus ES-1]
gi|291583968|gb|ADE11626.1| MotA/TolQ/ExbB proton channel [Sideroxydans lithotrophicus ES-1]
Length = 218
Score = 181 bits (461), Expect = 5e-44, Method: Composition-based stats.
Identities = 50/212 (23%), Positives = 96/212 (45%), Gaps = 4/212 (1%)
Query: 16 LFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKS 75
LF V + LL + SI++WS+ + K ++ REF + FW+ + +
Sbjct: 4 LFSINSPIVSATLALLILLSIVTWSIALFKLWKQWQAKQHDREFNECFWAVREWGDA-EK 62
Query: 76 LKNHHNIGLAAIFMSAMSEWKKSC--DKGARSPIGIQDRIDRMMDVAIARELEEITEKLS 133
+ + +A + + +E K + + QD ++RM+ + L+
Sbjct: 63 VARNSQGDIARLAQAGFAELKTLSADQQDLKHSGAPQDVLERMLRQQLQNIQRYHERGLA 122
Query: 134 FLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIPS 192
L S+ S +G+ G V G+M Q I S ++ + G I E+LI+ +G+ ++P+
Sbjct: 123 ELASIGSTSPFIGLFGTVWGIMHALQDIGRSGSASLDVVAGPIGEALIATAIGIATALPA 182
Query: 193 SIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+AYN F+ K +E FA++F + +
Sbjct: 183 VLAYNFFLRRLKVHVTDLENFAHDFLRLAQKH 214
>gi|225873732|ref|YP_002755191.1| transporter, MotA/TolQ/ExbB proton channel family [Acidobacterium
capsulatum ATCC 51196]
gi|225791727|gb|ACO31817.1| transporter, MotA/TolQ/ExbB proton channel family [Acidobacterium
capsulatum ATCC 51196]
Length = 247
Score = 181 bits (461), Expect = 5e-44, Method: Composition-based stats.
Identities = 53/223 (23%), Positives = 100/223 (44%), Gaps = 4/223 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG- 66
+ S+ ++ QMG K ++ +LFI SI S +V+I + + F R+Q REF
Sbjct: 24 AVGFSLPDMWHQMGDLAKGVVFVLFIMSIWSLAVMIDRWLYFSAARKQSREFAPKVAGAL 83
Query: 67 --QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARE 124
L+ K + LA + + + E++ G+ + R ++ A A
Sbjct: 84 REGKLDEAVKVADRNKKSHLAEVVTAGLQEFRNYGGGGSAVTPEQIESSKRALERAEAIV 143
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISIL 183
++ L L ++ S VG+ G V G++ F IA + + GI E+L++
Sbjct: 144 HAKLKRGLGALATIGSTAPFVGLFGTVAGILKAFNEIATMKTPGIGAVAGGISEALVTTA 203
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
GL V++P+ +N F + F ++M+ ++E +Q+
Sbjct: 204 FGLLVAVPAVWTFNYFTNKVESFDVEMDNSSSELVDYFIKQSR 246
>gi|305432723|ref|ZP_07401883.1| TonB system transporter ExbB [Campylobacter coli JV20]
gi|304444232|gb|EFM36885.1| TonB system transporter ExbB [Campylobacter coli JV20]
Length = 258
Score = 181 bits (461), Expect = 5e-44, Method: Composition-based stats.
Identities = 51/216 (23%), Positives = 101/216 (46%), Gaps = 10/216 (4%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
+++S+ +L+ VK +I +L +FS+L+W+V I K + F +++ Q ++
Sbjct: 45 IELSLSSLYQNADEVVKGVIYILVLFSVLAWAVFISKLMQFYFMKKNLDSSIQKIKELKN 104
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
L + ++ + L E + +K I++RI+ + I++++
Sbjct: 105 LNELDQTKDFAGVLSL---------EIQDELEKSEYKNDHIKERIELRLQNTISKQITAS 155
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
LS L S+ ++ +G+ G V G+M F IA + ++ V PGI E+L + GL
Sbjct: 156 KNGLSLLASIGASAPFIGLFGTVWGIMNAFIGIANLGNASLAVVAPGIAEALFATAFGLI 215
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
+IP+ + YN + K ++ AN + R
Sbjct: 216 AAIPAVLFYNYLTRKNLKLMHHLDELANFVYILFHR 251
>gi|258542444|ref|YP_003187877.1| ExbB/TolQ/MotA [Acetobacter pasteurianus IFO 3283-01]
gi|256633522|dbj|BAH99497.1| ExbB/TolQ/MotA [Acetobacter pasteurianus IFO 3283-01]
gi|256636581|dbj|BAI02550.1| ExbB/TolQ/MotA [Acetobacter pasteurianus IFO 3283-03]
gi|256639634|dbj|BAI05596.1| ExbB/TolQ/MotA [Acetobacter pasteurianus IFO 3283-07]
gi|256642690|dbj|BAI08645.1| ExbB/TolQ/MotA [Acetobacter pasteurianus IFO 3283-22]
gi|256645745|dbj|BAI11693.1| ExbB/TolQ/MotA [Acetobacter pasteurianus IFO 3283-26]
gi|256648798|dbj|BAI14739.1| ExbB/TolQ/MotA [Acetobacter pasteurianus IFO 3283-32]
gi|256651851|dbj|BAI17785.1| ExbB/TolQ/MotA [Acetobacter pasteurianus IFO 3283-01-42C]
gi|256654842|dbj|BAI20769.1| ExbB/TolQ/MotA [Acetobacter pasteurianus IFO 3283-12]
Length = 249
Score = 181 bits (461), Expect = 5e-44, Method: Composition-based stats.
Identities = 51/221 (23%), Positives = 102/221 (46%), Gaps = 4/221 (1%)
Query: 6 LAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS 65
LA + S + +F+ G V+C++ LL + ++L+W++ I KSV + +R + + E
Sbjct: 4 LAPISFSPWEMFLNAGPVVRCVMVLLAVAALLTWTIFIAKSVELLRVRAKLTKAEHTLEQ 63
Query: 66 GQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
+L+ + + + G+A + A + G+++RI ++ A E
Sbjct: 64 AGTLDLGEEGTRKN---GIAHTLVMAAETERTRSQDIPDDSEGLKERIVLHLERLEAAEG 120
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILL 184
+ L ++ + +G+ G V G+M F IA + ++ V PGI E+L++ L
Sbjct: 121 RRLMRGTGVLATIGATSPFIGLFGTVWGIMTSFTGIAASKATSLAVVAPGIAEALLATAL 180
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
GL +IP+ + YN + Q+ + ++SR
Sbjct: 181 GLVAAIPAVVIYNHLARQTASCRAQVADLTSLVMRLVSRDL 221
>gi|194719509|gb|ACF93793.1| ExbB [Collimonas fungivorans Ter331]
Length = 306
Score = 181 bits (461), Expect = 5e-44, Method: Composition-based stats.
Identities = 48/221 (21%), Positives = 97/221 (43%), Gaps = 11/221 (4%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YGL AL+ + + +L + S+ SW +II K + + L Q + ++
Sbjct: 75 NPYGLD-------ALWKGGDFVARGTLIILVLMSMGSWYIIITKLIEQVKLMGQAKNAQK 127
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
FW S+E LK N I + ++ + D I + + + ++
Sbjct: 128 TFWKAASVEAGVSGLK--PNSAYRFIAQNGVNSTQH-HDGALLEQIDLNTWVTMSIQRSV 184
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLI 180
+ + + L+FL ++ S VG+ G V G+ +I ++ + G + E+LI
Sbjct: 185 EKVQSRLQDGLAFLATVGSTAPFVGLFGTVWGIYHALTAIGIAGQASIDKVAGPVGEALI 244
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+GL V++P+ + YN + +K ++ F+ + ++L
Sbjct: 245 MTAIGLAVAVPAVLGYNWLVRRNKSAMEEIRSFSADLHSVL 285
>gi|186477338|ref|YP_001858808.1| MotA/TolQ/ExbB proton channel [Burkholderia phymatum STM815]
gi|184193797|gb|ACC71762.1| MotA/TolQ/ExbB proton channel [Burkholderia phymatum STM815]
Length = 250
Score = 181 bits (461), Expect = 5e-44, Method: Composition-based stats.
Identities = 48/216 (22%), Positives = 88/216 (40%), Gaps = 2/216 (0%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
I + +L SI SW +I KS +RQ FW +L
Sbjct: 6 IIHYLQTSDAITHGVAYVLLAMSIASWCFLIVKSWMLSRAKRQGPRAVARFWLAPTLAEG 65
Query: 73 CKSLKNHHNIGL-AAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEK 131
+L+ + + + +A+ + + + +R+ R + A+ R +
Sbjct: 66 VATLRLADRERIFSPLAEAALKASEVETPGALLARVERSERVLRALRQALHRSQRRLEFG 125
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSI 190
L S+ S VG+LG V G+ SIA + ++ G + E+LI GL V+I
Sbjct: 126 QVLLASIGSTAPFVGLLGTVWGIYHALGSIAQSGQAMIENVAGPVGEALIMTAFGLVVAI 185
Query: 191 PSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
P+ +AYN ++ + ++GFA++ A + +
Sbjct: 186 PAVLAYNVLGRMVRQVSEDLDGFAHDLHAYVCAPAD 221
>gi|77464499|ref|YP_354003.1| biopolymer transport protein, ExbB [Rhodobacter sphaeroides 2.4.1]
gi|77388917|gb|ABA80102.1| Biopolymer transport protein, ExbB [Rhodobacter sphaeroides 2.4.1]
Length = 349
Score = 181 bits (460), Expect = 6e-44, Method: Composition-based stats.
Identities = 51/221 (23%), Positives = 102/221 (46%), Gaps = 3/221 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
D++ + +F V+ ++ LL S ++W+V++ K V RR+ +
Sbjct: 123 PHDLTPWGMFEAAHWVVQAVMILLAAASFVTWTVLLFKLVEIAIARRRLARTAATVETSA 182
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKS-CDKGARSPIGIQDRIDRMMDVAIARELE 126
+LE + L + A + ++ E ++S G+++R+ +++ A+ E
Sbjct: 183 TLEEAVRRLAGRKD-PAAFMARASFEELQRSDAALDLAGTAGLKERVRSILERVEAQAGE 241
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLG 185
+ + L ++ S G VG+ G V G+M F I+ + N+ V PGI E+L++ LG
Sbjct: 242 RLRRGIGLLATIGSVGPFVGLFGTVWGIMNAFIGISQSQTTNLAVVAPGIAEALLATGLG 301
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
L +IP+ + YN F+ + + + +LSR +
Sbjct: 302 LVAAIPAVVIYNHFVRSIASWRLSLADAGAAIERMLSRDLD 342
>gi|323528304|ref|YP_004230456.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. CCGE1001]
gi|323385306|gb|ADX57396.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. CCGE1001]
Length = 250
Score = 181 bits (460), Expect = 6e-44, Method: Composition-based stats.
Identities = 57/248 (22%), Positives = 99/248 (39%), Gaps = 34/248 (13%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
M +YGLA ++ L + I+ LLF+ S+LSW+VI+ K N + ++R +
Sbjct: 1 MQHYGLA-------NVWQSGDLVTRAILCLLFVMSMLSWTVIVVKLWNVLRIKRLTGRTD 53
Query: 61 QLFWSGQSLETVCKSLKNHHNIGLAA-----------IFMSAMSE--------------- 94
FW S E ++L + A +A+ +
Sbjct: 54 AQFWQADSFEHGLQNLGGLSSGSGHANHGGRGGCSDEASAAALRDNPLLALAMAAAEAAA 113
Query: 95 WKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGM 154
+ + I + D I R + +I + + L+ L S+ S VG+ G V G+
Sbjct: 114 HHRDNKPHLQDRIDVSDWIARRLQSSIDDAVAHMQSGLAVLASIGSTAPFVGLFGTVWGI 173
Query: 155 MGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGF 213
I ++ + G + ESLI GL V+IP+ + YN +K +++ F
Sbjct: 174 YHALIVIGETGQASIDRVAGPVGESLIMTAFGLFVAIPAVLGYNGLTRANKSIVTRLKRF 233
Query: 214 ANEFSAIL 221
A+ A
Sbjct: 234 AHGLHAYF 241
>gi|299138489|ref|ZP_07031668.1| MotA/TolQ/ExbB proton channel [Acidobacterium sp. MP5ACTX8]
gi|298599735|gb|EFI55894.1| MotA/TolQ/ExbB proton channel [Acidobacterium sp. MP5ACTX8]
Length = 259
Score = 181 bits (460), Expect = 6e-44, Method: Composition-based stats.
Identities = 46/221 (20%), Positives = 96/221 (43%), Gaps = 3/221 (1%)
Query: 3 NYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQL 62
+A +I + G ++ +L + SI SW++++ K +F +Q R F +
Sbjct: 20 PPPVAAHSGAIAEMLHNSGPTALTVLGILLLASIFSWAIMLSKWRSFGAANKQNRRFVRA 79
Query: 63 FWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIA 122
F L + L +F E+++ G R ++R A +
Sbjct: 80 FRKSGRLSEIAAVADQFRPSPLVTVFHEIHDEYQR--QSGGRGTPPNPQAMERAAQTASS 137
Query: 123 RELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLIS 181
+ + ++++L +++ + VG+ G V+G++ F + + + PGI E+LI+
Sbjct: 138 EAVTIMERRMTWLATIAQSATFVGLFGTVMGIVDAFHGLGTAGAATLRAVAPGISEALIT 197
Query: 182 ILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
GL V+IP+ + YN+ ++FA + + F E +
Sbjct: 198 TAAGLVVAIPALVGYNQLTARLREFAARCDDFGRELLNAIE 238
>gi|71735398|ref|YP_275070.1| TonB system transport protein ExbB2 [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|257482634|ref|ZP_05636675.1| TonB system transport protein ExbB2 [Pseudomonas syringae pv.
tabaci ATCC 11528]
gi|289623868|ref|ZP_06456822.1| TonB system transport protein ExbB2 [Pseudomonas syringae pv.
aesculi str. NCPPB3681]
gi|289650028|ref|ZP_06481371.1| TonB system transport protein ExbB2 [Pseudomonas syringae pv.
aesculi str. 2250]
gi|71555951|gb|AAZ35162.1| TonB system transport protein ExbB2 [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|320323563|gb|EFW79647.1| TonB system transport protein ExbB2 [Pseudomonas syringae pv.
glycinea str. B076]
gi|320328195|gb|EFW84199.1| TonB system transport protein ExbB2 [Pseudomonas syringae pv.
glycinea str. race 4]
gi|330868827|gb|EGH03536.1| TonB system transport protein ExbB2 [Pseudomonas syringae pv.
aesculi str. 0893_23]
gi|330880152|gb|EGH14301.1| TonB system transport protein ExbB2 [Pseudomonas syringae pv.
glycinea str. race 4]
gi|330890875|gb|EGH23536.1| TonB system transport protein ExbB2 [Pseudomonas syringae pv. mori
str. 301020]
gi|330986048|gb|EGH84151.1| TonB system transport protein ExbB2 [Pseudomonas syringae pv.
lachrymans str. M301315]
gi|331010353|gb|EGH90409.1| TonB system transport protein ExbB2 [Pseudomonas syringae pv.
tabaci ATCC 11528]
Length = 242
Score = 181 bits (460), Expect = 6e-44, Method: Composition-based stats.
Identities = 53/202 (26%), Positives = 103/202 (50%), Gaps = 5/202 (2%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLA 85
+I LL IFS+ +W + + K V F L+ Q R+F + FW+ SL++ + L A
Sbjct: 14 AVIWLLVIFSVATWGLALLKGVQFSRLKSQDRKFHKQFWAASSLDSAAQ-LAQEQPGAAA 72
Query: 86 AIFMSAMSEWKK---SCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAG 142
+ ++ + + + I QDR++R + I RE + L+ L S+ S
Sbjct: 73 RVALAGYAAIQVPDGAQANDLSQSINHQDRLERALRQQIVRERRSLETGLAILASIGSTS 132
Query: 143 LLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIPSSIAYNKFIE 201
+G+ G V G+M + I+ S ++ ++ G I +L++ +G+ V++P+ + YN F+
Sbjct: 133 PFIGLFGTVWGIMSALKGISAAGSASLETVAGPIGAALVATGVGIAVAVPAVLVYNYFLR 192
Query: 202 DSKKFAMQMEGFANEFSAILSR 223
K A ++ FA++F ++ +
Sbjct: 193 RLKLTAADLDDFAHDFYSLAQK 214
>gi|310823645|ref|YP_003956003.1| adventurous gliding motility protein X [Stigmatella aurantiaca
DW4/3-1]
gi|309396717|gb|ADO74176.1| Adventurous gliding motility protein X [Stigmatella aurantiaca
DW4/3-1]
Length = 234
Score = 181 bits (460), Expect = 7e-44, Method: Composition-based stats.
Identities = 58/232 (25%), Positives = 106/232 (45%), Gaps = 9/232 (3%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
M LA+ ++ + ++TLL S+ SW +I+ K+ R Q F
Sbjct: 1 MFRLPLALGAMNYLEIIRGASFIELAVLTLLMGVSVASWGLIVMKATQLSRARSQSLTFL 60
Query: 61 QLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDR------ID 114
FW LE + ++ + L+ +F + E K + + DR ++
Sbjct: 61 DTFWKATRLEGIYQTAQGLEGSPLSKVFCAGYEELSKLAQAKEGTDGAMSDRLGGIENVE 120
Query: 115 RMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA--GYYSNNVVSI 172
R + A ++ E+ ++ FLG++ +A VG+ G V+G++ F IA G + + V+
Sbjct: 121 RALHRAATTQITELEARVPFLGTVGAAAPFVGLFGTVIGILNAFNEIADKGNATLSTVAA 180
Query: 173 PGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
P + +L + GL +IP+ +AYN F+ K F +M F+ +F I+ R
Sbjct: 181 P-VGNALFATAAGLFAAIPAVVAYNSFVSRIKIFDTEMSNFSADFLNIIKRH 231
>gi|330900513|gb|EGH31932.1| TonB system transport protein ExbB2 [Pseudomonas syringae pv.
japonica str. M301072PT]
gi|330979867|gb|EGH78183.1| TonB system transport protein ExbB2 [Pseudomonas syringae pv.
aptata str. DSM 50252]
Length = 242
Score = 181 bits (460), Expect = 7e-44, Method: Composition-based stats.
Identities = 52/202 (25%), Positives = 103/202 (50%), Gaps = 5/202 (2%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLA 85
+I LL +FS+ +W + + K V F L+ Q R+F + FW+ SL++ + L A
Sbjct: 14 AVIWLLVLFSVATWGLALLKGVQFSRLKSQDRKFHKRFWAASSLDSAAQ-LAQEQPGAAA 72
Query: 86 AIFMSAMSEWKK---SCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAG 142
+ ++ + + + I QDR++R + I RE + L+ L S+ S
Sbjct: 73 RVALAGYAAIQVPDGAQANDLSQSINHQDRLERALRQQIVRERRSLETGLAILASIGSTS 132
Query: 143 LLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIPSSIAYNKFIE 201
+G+ G V G+M + I+ S ++ ++ G I +L++ +G+ V++P+ + YN F+
Sbjct: 133 PFIGLFGTVWGIMSALKGISAAGSASLETVAGPIGAALVATGVGIAVAVPAVLVYNYFLR 192
Query: 202 DSKKFAMQMEGFANEFSAILSR 223
K A ++ FA++F ++ +
Sbjct: 193 RLKLTAADLDDFAHDFYSLAQK 214
>gi|330991100|ref|ZP_08315054.1| Biopolymer transport protein exbB [Gluconacetobacter sp. SXCC-1]
gi|329761921|gb|EGG78411.1| Biopolymer transport protein exbB [Gluconacetobacter sp. SXCC-1]
Length = 350
Score = 181 bits (460), Expect = 7e-44, Method: Composition-based stats.
Identities = 43/222 (19%), Positives = 92/222 (41%), Gaps = 11/222 (4%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YGL AL+ + ++ ++ S+ +W ++I K + ++
Sbjct: 112 NPYGLG-------ALWANGDFIARGVLLIMVFMSLGTWYIMITKFFEQARVMAAAKQVMT 164
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
FW+ S++ +L N I + + + + + I + + ++
Sbjct: 165 DFWTKGSIKEGAAALPA--NSPFRYIADTGVKA-AEHHEGTMQESIDLHSWTTMSIQRSV 221
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLI 180
++ L+FLG++ S VG+ G V G+ +I ++ + G + ESLI
Sbjct: 222 DVIQTKLQGGLAFLGTVGSTSPFVGLFGTVWGIYHALTAIGIAGQASIDKVAGPVGESLI 281
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
+GL ++P+ + YN + +K ++ FA + +IL
Sbjct: 282 MTAIGLGTAVPAVLGYNLLVRRNKGAIDKVRNFAADVQSILM 323
>gi|206891066|ref|YP_002248792.1| TolQ protein [Thermodesulfovibrio yellowstonii DSM 11347]
gi|206743004|gb|ACI22061.1| TolQ protein [Thermodesulfovibrio yellowstonii DSM 11347]
Length = 209
Score = 181 bits (459), Expect = 8e-44, Method: Composition-based stats.
Identities = 52/212 (24%), Positives = 99/212 (46%), Gaps = 11/212 (5%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
M+ ++ L Q G K ++ +L FSI SW++I K F ++++ ++F F +
Sbjct: 2 FMEPTVIDLIKQTGFIAKSVLLILLFFSIFSWAIIFYKWKIFKNMKKENQKFFDAFINSN 61
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + K +A+++ + +E + +D ++ + E +
Sbjct: 62 GTKELFSLAKRFELSPIASLYRAVFAETQGRNSVN----------LDAIVKKYSSDEANK 111
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
I L FL + S +G+ G V G+M F+SI S ++ ++ PGI E+LI+ GL
Sbjct: 112 IESYLGFLATTGSTTPFIGLFGTVWGIMDAFRSIGIKGSASIATVAPGIAEALITTAAGL 171
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFS 218
+IP+ IAYN F + K +++ F+
Sbjct: 172 FAAIPAVIAYNYFTSQANKIINEVQDFSETLL 203
>gi|229587785|ref|YP_002869904.1| putative transporter-like membrane protein [Pseudomonas fluorescens
SBW25]
gi|229359651|emb|CAY46494.1| putative transport-related membrane protein [Pseudomonas
fluorescens SBW25]
Length = 239
Score = 181 bits (459), Expect = 8e-44, Method: Composition-based stats.
Identities = 51/203 (25%), Positives = 102/203 (50%), Gaps = 3/203 (1%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIG-- 83
+I LL +FS+ +W + + K V F L+ Q R F + FW+ SL++ + +
Sbjct: 13 AVIWLLVVFSVATWGLALLKGVQFGRLKAQDRRFHKQFWAASSLDSAAELAETQPGAAAR 72
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
+A +A+ + I QDR++R + I RE + L+ + S+ S
Sbjct: 73 VAQAGYAAIQVGETPHAADLSQAINHQDRLERALRQQIVRERRSLETGLAVVASIGSTSP 132
Query: 144 LVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIPSSIAYNKFIED 202
+G+ G V G+M + I+ S ++ ++ G I +L++ +G+ V++P+ + YN F+
Sbjct: 133 FIGLFGTVWGIMEALKGISAAGSASLETVAGPIGAALVATGVGIAVAVPAVLVYNYFLRR 192
Query: 203 SKKFAMQMEGFANEFSAILSRQT 225
K A ++ FA++F ++ + +
Sbjct: 193 LKLTAADLDDFAHDFYSLAQKNS 215
>gi|120601889|ref|YP_966289.1| MotA/TolQ/ExbB proton channel [Desulfovibrio vulgaris DP4]
gi|120562118|gb|ABM27862.1| Cell division and transport-associated protein TolQ [Desulfovibrio
vulgaris DP4]
Length = 311
Score = 181 bits (459), Expect = 9e-44, Method: Composition-based stats.
Identities = 47/205 (22%), Positives = 98/205 (47%), Gaps = 2/205 (0%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+ I L+ + ++ +L + S++SWS+I++K++ F +L + + +
Sbjct: 1 MEIIELYSHATPVARAVMAVLVVMSVVSWSIIVRKALLFRSLEGRLDGAIHRLEACDGIA 60
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
K H + + + + E+ + + A + + I D + R M A+A E +
Sbjct: 61 EAMSRFKGHADNTVWHLLRTGYREYMRLLPRRAPAEV-IADNVRRAMRHAVAEETGRLGS 119
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV-SIPGIIESLISILLGLCVS 189
+L L + ++ +G+ G V G+M F +AG + + PGI E+LI+ +GL V+
Sbjct: 120 QLPLLATTANTAPFIGLFGTVWGIMDAFHKLAGAKTAAIASVAPGISEALIATAVGLGVA 179
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFA 214
IP++I YN + ++ ++ A
Sbjct: 180 IPAAIGYNLHMTRVRRVQARLISLA 204
>gi|254251909|ref|ZP_04945227.1| Biopolymer transport protein [Burkholderia dolosa AUO158]
gi|124894518|gb|EAY68398.1| Biopolymer transport protein [Burkholderia dolosa AUO158]
Length = 218
Score = 181 bits (459), Expect = 9e-44, Method: Composition-based stats.
Identities = 50/195 (25%), Positives = 82/195 (42%), Gaps = 7/195 (3%)
Query: 34 FSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMS 93
S+LSW VII K N + L R + EQ FW + K L + F++
Sbjct: 2 MSVLSWIVIIVKGWNVVRLNRLTKNAEQAFWHSDDFDDGIKKLGQAASTPSDNPFLALAL 61
Query: 94 EWKKSCDKGARSPIGIQDRID------RMMDVAIARELEEITEKLSFLGSMSSAGLLVGI 147
K++ D ++ + DR+D R + + + + L+ L S+ S VG+
Sbjct: 62 SGKEAADHHHQTQPHLHDRMDVSDWITRCLKDTMDEGISRMQSGLAILASIGSTAPFVGL 121
Query: 148 LGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIPSSIAYNKFIEDSKKF 206
G V G+ I ++ + G + ESLI GL V+IP+ + YN +K
Sbjct: 122 FGTVWGIYHALLVIGATGQTSIDQVAGPVGESLIMTAFGLFVAIPAVLGYNALTRANKGV 181
Query: 207 AMQMEGFANEFSAIL 221
++ FA+ A
Sbjct: 182 VSKLRRFAHGLHAYF 196
>gi|315498553|ref|YP_004087357.1| mota/tolq/exbb proton channel [Asticcacaulis excentricus CB 48]
gi|315416565|gb|ADU13206.1| MotA/TolQ/ExbB proton channel [Asticcacaulis excentricus CB 48]
Length = 291
Score = 180 bits (458), Expect = 1e-43, Method: Composition-based stats.
Identities = 57/223 (25%), Positives = 104/223 (46%), Gaps = 7/223 (3%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
I++ ++F+ VK ++ L S++SW++++ K + F L + + + F +S+
Sbjct: 66 ITVASMFIMAVPVVKAVMIGLVAASVISWTILVIKLMFFAKLNKSSNNYLEAFRGARSIA 125
Query: 71 TVCK--SLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQD----RIDRMMDVAIARE 124
+ + + +A + A E + S G + +D R ++ A
Sbjct: 126 DINRISTSDEFAGNPMADMAAVATEEIQISKQAGLQVSGEHRDSTLHRASSSINAVQAGL 185
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISIL 183
+ ++ L+FL S S G VG+ G V G+M F IA + N+ V PGI E+L++
Sbjct: 186 AKRLSGGLTFLASTGSIGPFVGLFGTVYGIMNSFIGIADSGTTNLAVVAPGIAEALLATG 245
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+GL +IP+ + YN F + + E F E LSRQ +
Sbjct: 246 IGLAAAIPAVVMYNIFNTSIAAYGTRSEQFVAELMNSLSRQLD 288
>gi|152981657|ref|YP_001354583.1| MotA/TolQ/ExbB proton channel family protein [Janthinobacterium sp.
Marseille]
gi|151281734|gb|ABR90144.1| MotA/TolQ/ExbB proton channel family protein [Janthinobacterium sp.
Marseille]
Length = 230
Score = 180 bits (458), Expect = 1e-43, Method: Composition-based stats.
Identities = 49/225 (21%), Positives = 95/225 (42%), Gaps = 5/225 (2%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
MN+ A + + + Q + +L I SILSW I+ K+ + +R+
Sbjct: 1 MNSTA-ADQGLGLAHYWAQGDAVSHSVAYVLLIMSILSWYYILSKAWSSWRIRKSA-AAL 58
Query: 61 QLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWK--KSCDKGARSPIGIQDRIDRMMD 118
FW +L +++ + + + E K + + I R +
Sbjct: 59 DGFWQAPTLTDAIATIRRSDSENVYTPLAAQSVEAANIKPHANSLNANTDPGELITRTLR 118
Query: 119 VAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIE 177
I R + L+ L S+ S +G+ G V G+ +++ + + + G + E
Sbjct: 119 QEINRVSSRLETGLTLLASVGSTAPFIGLFGTVWGIYHALVAVSSSGTIQIDKVAGPVGE 178
Query: 178 SLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
+LI LGL V+IP+ +AYN F ++ +++ FA++ A L+
Sbjct: 179 ALIMTALGLAVAIPAVLAYNAFTRVNRVTLAELDAFAHDLHAYLT 223
>gi|163851045|ref|YP_001639088.1| MotA/TolQ/ExbB proton channel [Methylobacterium extorquens PA1]
gi|218529875|ref|YP_002420691.1| MotA/TolQ/ExbB proton channel [Methylobacterium chloromethanicum
CM4]
gi|240138179|ref|YP_002962651.1| membrane spanning protein in TonB-ExbB-ExbD complex
[Methylobacterium extorquens AM1]
gi|254560739|ref|YP_003067834.1| TonB-ExbB-ExbD complex membrane spanning protein [Methylobacterium
extorquens DM4]
gi|163662650|gb|ABY30017.1| MotA/TolQ/ExbB proton channel [Methylobacterium extorquens PA1]
gi|218522178|gb|ACK82763.1| MotA/TolQ/ExbB proton channel [Methylobacterium chloromethanicum
CM4]
gi|240008148|gb|ACS39374.1| membrane spanning protein in TonB-ExbB-ExbD complex
[Methylobacterium extorquens AM1]
gi|254268017|emb|CAX23888.1| membrane spanning protein in TonB-ExbB-ExbD complex
[Methylobacterium extorquens DM4]
Length = 233
Score = 180 bits (458), Expect = 1e-43, Method: Composition-based stats.
Identities = 61/219 (27%), Positives = 105/219 (47%), Gaps = 10/219 (4%)
Query: 7 AIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG 66
A D+S LF+Q VK ++ LL + S+ W+V+ +K V +RQ + F+ + S
Sbjct: 13 AAHDMSFIGLFLQADPIVKSVMILLVVASLACWTVVFEKIVRLSAAKRQAKAFDAMVRSE 72
Query: 67 QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
+++T K + H + + + W+ + S ++RI+R M A++ E++
Sbjct: 73 GTIDTGQKGIAGH-------VVKAGLDAWRD--QDPSESRAERRERIERAMKGALSLEVK 123
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLG 185
+ L L + S VG+ G V G+M F SIA ++ V PGI E+L + +G
Sbjct: 124 RLQGGLPLLATSGSTAPFVGLFGTVWGIMNSFSSIAKSQDTSLAVVAPGIAEALFATAIG 183
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
L V+IP+ +AYNK D + + L+R
Sbjct: 184 LVVAIPAVMAYNKLSGDVARIQSSFVSCISVLGNRLARD 222
>gi|39934314|ref|NP_946590.1| putative biopolymer transport protein ExbB [Rhodopseudomonas
palustris CGA009]
gi|39648162|emb|CAE26682.1| putative biopolymer transport protein ExbB [Rhodopseudomonas
palustris CGA009]
Length = 328
Score = 180 bits (458), Expect = 1e-43, Method: Composition-based stats.
Identities = 44/216 (20%), Positives = 98/216 (45%), Gaps = 5/216 (2%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S + +F + VK ++ L + S+ +W+V + K++ + R+ + +L
Sbjct: 106 DLSAWGMFKNADIVVKVVMAGLALASLATWTVWLSKTIELRRETARARDGLSKLETDTTL 165
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+ + + H+ ++ + +A E S G ++R+ ++ A +I
Sbjct: 166 AELGRGSEGAHD-AVSQLIQTAAREGSLS---GWTFDADFKERVALRLERVEAAMARKIA 221
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCV 188
L ++ + VG+ G V G+M F I+ ++ N+ V PGI E+L++ LGL
Sbjct: 222 SGTGILATVGAVAPFVGLFGTVWGIMNAFIGISEAHTTNLAVVAPGIAEALLATALGLVA 281
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
++P+ + YN + + + + + ++SR
Sbjct: 282 AVPAVVIYNYLVRAIATYRALLGDASAQVLLLVSRD 317
>gi|134095826|ref|YP_001100901.1| biopolymer transport ExbB protein [Herminiimonas arsenicoxydans]
gi|133739729|emb|CAL62780.1| Putative biopolymer transport ExbB protein [Herminiimonas
arsenicoxydans]
Length = 230
Score = 180 bits (458), Expect = 1e-43, Method: Composition-based stats.
Identities = 55/227 (24%), Positives = 100/227 (44%), Gaps = 9/227 (3%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
MN+ +A + + + Q + L I SILSW I+ K + +RR E
Sbjct: 1 MNST-VAEQGLGLSHYWAQGDAVSHAVAYALLIMSILSWYYILSKGWSAWRIRRSAAALE 59
Query: 61 QLFWSGQSLETVCKSLK----NHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRM 116
FW +L +++ + LAA + A + + A + G + I R
Sbjct: 60 N-FWQAPTLPDAIAAIRLTDSENVYTPLAAQSVEAANITPHANSLNANTDPG--ELITRT 116
Query: 117 MDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-I 175
+ I R + L+ L S+ S +G+ G V G+ +++ + + + G +
Sbjct: 117 LRQEINRVSSRLENGLTLLASVGSTAPFIGLFGTVWGIYHALVAVSASGTVQIDKVAGPV 176
Query: 176 IESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
E+LI LGL V+IP+ +AYN F ++ +++ FA++ A L+
Sbjct: 177 GEALIMTALGLAVAIPAVLAYNAFTRVNRITLAELDAFAHDLHAYLT 223
>gi|302188942|ref|ZP_07265615.1| TonB system transport protein ExbB2 [Pseudomonas syringae pv.
syringae 642]
Length = 242
Score = 180 bits (458), Expect = 1e-43, Method: Composition-based stats.
Identities = 53/202 (26%), Positives = 103/202 (50%), Gaps = 5/202 (2%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLA 85
+I LL +FSI +W + + K V F L+ Q R+F + FW+ SL++ + L A
Sbjct: 14 AVIWLLVLFSIATWGLALLKGVQFSRLKSQDRKFHKQFWAASSLDSAAQ-LAQEQPGAAA 72
Query: 86 AIFMSAMSEWKK---SCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAG 142
+ ++ + + + I QDR++R + I RE + L+ L S+ S
Sbjct: 73 RVALAGYAAIQVPDGAQANDLSQSINHQDRLERALRQQIVRERRSLETGLAILASIGSTS 132
Query: 143 LLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIPSSIAYNKFIE 201
+G+ G V G+M + I+ S ++ ++ G I +L++ +G+ V++P+ + YN F+
Sbjct: 133 PFIGLFGTVWGIMSALKGISAAGSASLETVAGPIGAALVATGVGIAVAVPAVLVYNYFLR 192
Query: 202 DSKKFAMQMEGFANEFSAILSR 223
K A ++ FA++F ++ +
Sbjct: 193 RLKLTAADLDDFAHDFYSLAQK 214
>gi|300312127|ref|YP_003776219.1| biopolymer transport transmembrane protein [Herbaspirillum
seropedicae SmR1]
gi|300074912|gb|ADJ64311.1| biopolymer transport transmembrane protein [Herbaspirillum
seropedicae SmR1]
Length = 243
Score = 180 bits (458), Expect = 1e-43, Method: Composition-based stats.
Identities = 46/219 (21%), Positives = 96/219 (43%), Gaps = 8/219 (3%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
M NYGLA +++Q + + +IT+L S +SW V+I K + L R +
Sbjct: 1 MENYGLA-------NVWLQGDVVTRFLITILLGMSSVSWIVMIVKGMANRRLSRIGLKAH 53
Query: 61 QLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVA 120
+ FW+ S+E ++ + + I +A+ + + + +
Sbjct: 54 KEFWAAHSIEGGIAAIGAGTDNPYSNIATAAVEAQAQKDQPLLEGSTSNTEWVAYCVRNE 113
Query: 121 IARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESL 179
+ ++ + L+ L S+ S +G+ G V G+ +I ++ + G + ESL
Sbjct: 114 LDEQIAHLQGGLAVLASIGSTSPFIGLFGTVWGIYHALIAIGASGQASLDHVAGPVGESL 173
Query: 180 ISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFS 218
+ +GL V+IP+ + YN ++ A ++ F+++
Sbjct: 174 VMTAVGLFVAIPAVLGYNYVARGNRTVAQKLMRFSHQLH 212
>gi|78061538|ref|YP_371446.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. 383]
gi|77969423|gb|ABB10802.1| outer membrane transport energization protein ExbB [Burkholderia
sp. 383]
Length = 307
Score = 180 bits (457), Expect = 1e-43, Method: Composition-based stats.
Identities = 45/222 (20%), Positives = 89/222 (40%), Gaps = 11/222 (4%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
+N YGL AL+ + ++ LL + S+ SW +++ K R+ +
Sbjct: 77 INPYGLD-------ALWRGGDFVARFVLILLVVMSMGSWYIMVTKFFEQYRANRRATRAD 129
Query: 61 QLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVA 120
W+ SL + L E D+ + ID ++ A
Sbjct: 130 AQLWTAPSLVEGVQQLDASSPF---RFIAETAIEAGAHHDEVLLEAVDRNTWIDTSVERA 186
Query: 121 IARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESL 179
+ + + L+FLG++ S VG+ G V G+ +I ++ + G + E+L
Sbjct: 187 VTNVSNRLQDGLAFLGTVGSTAPFVGLFGTVWGIYHALTAIGVAGQASIDKVAGPVGEAL 246
Query: 180 ISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
I +GL V++P+ + YN + +K ++ F + ++
Sbjct: 247 IMTAIGLAVAVPAVLGYNFLVRRNKAVMERVRAFGAQLHVVV 288
>gi|226944276|ref|YP_002799349.1| ExbB proton channel [Azotobacter vinelandii DJ]
gi|226719203|gb|ACO78374.1| ExbB proton channel [Azotobacter vinelandii DJ]
Length = 236
Score = 180 bits (457), Expect = 1e-43, Method: Composition-based stats.
Identities = 48/203 (23%), Positives = 100/203 (49%), Gaps = 3/203 (1%)
Query: 23 AVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNI 82
+I +L FS+L+W + + K++ F L + R + FW SL++ + L
Sbjct: 11 VEHVVIWVLIGFSVLTWGLALIKTIQFARLGYRDRRLLKHFWQAPSLDSAAE-LVQRQAS 69
Query: 83 GLAAIFMSAMSEWKKS-CDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSA 141
+A + + + ++ I QDR++R + I RE + L+ + S+ S
Sbjct: 70 AVAHVAQAGFAAIREEPGQHDLAHSINHQDRLERALRQQIQRERRSLESGLAVVASIGST 129
Query: 142 GLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIPSSIAYNKFI 200
+G+ G V G+M + I+ S ++ ++ G I +L++ +G+ V++P+ + YN F+
Sbjct: 130 SPFIGLFGTVWGIMEALKGISAAGSASLETVAGPIGAALVATGVGIAVAVPAVLVYNYFL 189
Query: 201 EDSKKFAMQMEGFANEFSAILSR 223
K A ++ FA++F ++ +
Sbjct: 190 RRLKLTAADLDDFAHDFYSLAQK 212
>gi|289673477|ref|ZP_06494367.1| TonB system transport protein ExbB2 [Pseudomonas syringae pv.
syringae FF5]
Length = 242
Score = 179 bits (456), Expect = 2e-43, Method: Composition-based stats.
Identities = 52/202 (25%), Positives = 103/202 (50%), Gaps = 5/202 (2%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLA 85
+I LL +FS+ +W + + K V F L+ Q R+F + FW+ SL++ + L A
Sbjct: 14 AVIWLLVLFSVATWGLALLKGVQFSRLKSQDRKFHKRFWATSSLDSAAQ-LAQEQPGAAA 72
Query: 86 AIFMSAMSEWKK---SCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAG 142
+ ++ + + + I QDR++R + I RE + L+ L S+ S
Sbjct: 73 RVALAGYAAIQVPDGAQANDLSQSINHQDRLERALRQQIVRERRSLETGLAILASIGSTS 132
Query: 143 LLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIPSSIAYNKFIE 201
+G+ G V G+M + I+ S ++ ++ G I +L++ +G+ V++P+ + YN F+
Sbjct: 133 PFIGLFGTVWGIMSALKGISAAGSASLETVAGPIGAALVATGVGIAVAVPAVLVYNYFLR 192
Query: 202 DSKKFAMQMEGFANEFSAILSR 223
K A ++ FA++F ++ +
Sbjct: 193 RLKLTAADLDDFAHDFYSLAQK 214
>gi|237797486|ref|ZP_04585947.1| TonB system transport protein ExbB [Pseudomonas syringae pv. oryzae
str. 1_6]
gi|331020336|gb|EGI00393.1| TonB system transport protein ExbB [Pseudomonas syringae pv. oryzae
str. 1_6]
Length = 230
Score = 179 bits (456), Expect = 2e-43, Method: Composition-based stats.
Identities = 48/206 (23%), Positives = 95/206 (46%), Gaps = 4/206 (1%)
Query: 22 LAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHN 81
+ + + LL IFS+++W++++ K+ L RQ R + FW+ + L+ + H
Sbjct: 8 IITQTSMILLVIFSLVTWALLLGKTFQHWRLSRQNRRYATQFWAARDLQNALQL--PHGE 65
Query: 82 IGLAAIFMSAMSEWKKSCDK-GARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSS 140
LA + + D QD ++R + I +E + + L S+ S
Sbjct: 66 GSLARLTDAGAQALAAPHDSPDLGHSWNRQDLLERSLRQQIHKERRHLESGMILLASIGS 125
Query: 141 AGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIPSSIAYNKF 199
+G+ G V G++ +I+ S ++ + G I E+L++ +G+ V++P+ +AYN F
Sbjct: 126 TAPFIGLFGTVFGIIHALTAISQAKSASIAVVAGPIGEALVATGVGIAVAVPAVLAYNFF 185
Query: 200 IEDSKKFAMQMEGFANEFSAILSRQT 225
K ++ FA +F + R
Sbjct: 186 GRRMKLVIADLDEFAVDFLNLSQRNA 211
>gi|188583835|ref|YP_001927280.1| tonB-system energizer ExbB [Methylobacterium populi BJ001]
gi|179347333|gb|ACB82745.1| tonB-system energizer ExbB [Methylobacterium populi BJ001]
Length = 335
Score = 179 bits (456), Expect = 2e-43, Method: Composition-based stats.
Identities = 48/221 (21%), Positives = 90/221 (40%), Gaps = 7/221 (3%)
Query: 7 AIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG 66
A D+S +F+ VK ++ +L S+++W++++ K + +R+ R S
Sbjct: 103 AAHDLSPMGMFLAADPVVKAVMIILAAASVVTWTILLVKMFSLGLAKRRMRLSLNELRSA 162
Query: 67 QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
+L + ++ L G+++R ++ AR +
Sbjct: 163 GNLAEAGQRVRRGVGALLLVEAEEE------LGLSHGLPSEGVKERAAIALNRVEARVGK 216
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLG 185
+ L ++ S G VG+ G V G+MG F IA + N+ V PGI E+L++ +G
Sbjct: 217 RMASGTGILATIGSIGPFVGLFGTVWGIMGSFIGIASSNTTNLAVVAPGIAEALLATGIG 276
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
L +IP+ + YN + LSR +
Sbjct: 277 LVAAIPAVVIYNALTRSITGYRALTGDAVALIMRHLSRDLD 317
>gi|39936341|ref|NP_948617.1| putative enterochelin uptake protein ExbB [Rhodopseudomonas
palustris CGA009]
gi|39650196|emb|CAE28719.1| putative exbB, uptake of enterochelin; tonB-dependent uptake of B
colicins [Rhodopseudomonas palustris CGA009]
Length = 311
Score = 179 bits (456), Expect = 2e-43, Method: Composition-based stats.
Identities = 47/221 (21%), Positives = 91/221 (41%), Gaps = 3/221 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
D+S +F+ VK ++ L + S LSW++ + K+V + + + +
Sbjct: 74 PHDLSPIGMFIAADWVVKAVMIALLLASFLSWTICVAKAVEVACANARAKRAFLIVDRSR 133
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCD-KGARSPIGIQDRIDRMMDVAIARELE 126
L+ L + + SA E +S G+++R+ + A+
Sbjct: 134 DLDEAVHRLSKRGGPAV-FMVRSASEELHRSLPVLAYSGEAGLKERVVSRLARIEAQAGR 192
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLG 185
+ L ++ + VG+ G V G+M F I+ ++ N+ V PGI E+L++ G
Sbjct: 193 RLMRGTGLLATVGAVSPFVGLFGTVWGIMNAFIGISQSHTTNLAVVAPGIAEALLATAFG 252
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
L +IP+ I YN F + + A ++S +
Sbjct: 253 LVAAIPAVIIYNVFARAISGYRQVLADAAAGVERLISLDLD 293
>gi|300309940|ref|YP_003774032.1| biopolymer transport transmembrane protein [Herbaspirillum
seropedicae SmR1]
gi|300072725|gb|ADJ62124.1| biopolymer transport transmembrane protein [Herbaspirillum
seropedicae SmR1]
Length = 231
Score = 179 bits (456), Expect = 2e-43, Method: Composition-based stats.
Identities = 49/220 (22%), Positives = 92/220 (41%), Gaps = 7/220 (3%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
+I + Q + LL I SI SW I+ K+ +RR + FW +
Sbjct: 3 QNIGFAHYWAQGDAVSHSVAYLLLIMSIASWYYILSKAWAAWRIRRGS-NALERFWQAPT 61
Query: 69 LETVCKSLKNHHNIGL-----AAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAR 123
L +++ + + +A ++ + + I R + I R
Sbjct: 62 LADATAAMQRLDSEQIYTPMAERAAEAADIGTRQQGTPSLNAATDPGELITRTLRREINR 121
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISI 182
+ L+ L S+ S VG+ G V G+ +++ + + + G + E+LI
Sbjct: 122 VSARLERGLTLLASVGSTAPFVGLFGTVWGIYHALVAVSASGTVQIDKVAGPVGEALIMT 181
Query: 183 LLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
LGL V+IP+ +AYN F ++ +++GFA++ A L+
Sbjct: 182 ALGLLVAIPAVLAYNAFTRINRVVLAELDGFAHDLHAYLT 221
>gi|58039002|ref|YP_190966.1| ExbB protein [Gluconobacter oxydans 621H]
gi|58001416|gb|AAW60310.1| ExbB protein [Gluconobacter oxydans 621H]
Length = 241
Score = 179 bits (456), Expect = 2e-43, Method: Composition-based stats.
Identities = 48/216 (22%), Positives = 100/216 (46%), Gaps = 1/216 (0%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
S + +F+ G V+ ++T+L + S+++W++ I K++ LR + ++ E ++L+
Sbjct: 5 FSPWQMFLDAGPVVRGVMTILAMASLVTWTIFIAKTIELQRLRSRLKKSEITLEDAETLD 64
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
+ + G+A + A ++ GI++RI ++ A E +
Sbjct: 65 IGEEWTRTGSGSGIAHAMVMAAEVERQRSQDIPGDREGIKERIVLHLERLEAAEGRRLMR 124
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVS 189
L ++ + VG+ G V G+M F IA ++ ++ V PGI E+L++ LGL +
Sbjct: 125 GTGVLATIGATSPFVGLFGTVWGIMSSFTGIAAAHATSLAVVAPGIAEALLATALGLVAA 184
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
IP+ + YN + + + ++SR
Sbjct: 185 IPAVVIYNHLARQTAACRACLADLTSLVMRLVSRDL 220
>gi|301631723|ref|XP_002944946.1| PREDICTED: biopolymer transport protein exbB-like [Xenopus
(Silurana) tropicalis]
Length = 212
Score = 179 bits (456), Expect = 2e-43, Method: Composition-based stats.
Identities = 44/200 (22%), Positives = 84/200 (42%), Gaps = 4/200 (2%)
Query: 34 FSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSA-- 91
S+ SW VI+ K+++ + ++Q R + FW + T L + + +
Sbjct: 1 MSLASWIVILIKALDIMKFKKQARRAQD-FWHSEDFATGLAKLDTDPSNPFRHLALEGRE 59
Query: 92 MSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAV 151
+ ++ + I D + R + I + L+ L S+ S +G+ G V
Sbjct: 60 ATAHHRNTKGHLHDALDISDWVTRCLRNCIDEFTARLQSGLAILASVGSTAPFIGLFGTV 119
Query: 152 LGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQM 210
G+ +I + + + G I E+LI LGL V+IP+ + YN + +K ++
Sbjct: 120 WGIYHALVAIGTSGQSTIDKVAGPIGEALIMTALGLAVAIPAVLGYNALVRGNKSILNRL 179
Query: 211 EGFANEFSAILSRQTEGNIS 230
FA++ A +IS
Sbjct: 180 NSFAHDMHAYFVTGARVSIS 199
>gi|312958329|ref|ZP_07772850.1| TonB system transport protein [Pseudomonas fluorescens WH6]
gi|311287393|gb|EFQ65953.1| TonB system transport protein [Pseudomonas fluorescens WH6]
Length = 239
Score = 179 bits (456), Expect = 2e-43, Method: Composition-based stats.
Identities = 52/204 (25%), Positives = 104/204 (50%), Gaps = 5/204 (2%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLA 85
+I LL +FS+++W + + K V F L+ Q R+F + FW+ SL++ + L A
Sbjct: 13 TVIWLLVVFSVVTWGLALLKGVQFGRLKAQDRKFHRQFWAASSLDSAAE-LAETQPGAAA 71
Query: 86 AIFMSAMSEWKKSCDKGARS---PIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAG 142
+ + + + A I QDR++R + I RE + L+ + S+ S
Sbjct: 72 RVAQAGYAAIQVGDAPHAADLSQAINHQDRLERALRQQIVRERRSLETGLAVVASIGSTS 131
Query: 143 LLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIPSSIAYNKFIE 201
+G+ G V G+M + I+ S ++ ++ G I +L++ +G+ V++P+ + YN F+
Sbjct: 132 PFIGLFGTVWGIMEALKGISAAGSASLETVAGPIGAALVATGVGIAVAVPAVLVYNYFLR 191
Query: 202 DSKKFAMQMEGFANEFSAILSRQT 225
K A ++ FA++F ++ + +
Sbjct: 192 RLKLTAADLDDFAHDFYSLAQKNS 215
>gi|307728041|ref|YP_003911254.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. CCGE1003]
gi|307588566|gb|ADN61963.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. CCGE1003]
Length = 246
Score = 179 bits (456), Expect = 2e-43, Method: Composition-based stats.
Identities = 47/221 (21%), Positives = 91/221 (41%), Gaps = 10/221 (4%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
M YG+A ++ + I L S+ SW V++ K++ L + +
Sbjct: 1 MEQYGIA-------NVWQTGDFVTRFIFVTLLAMSVASWIVLLTKAIANRRLEAIGKRAQ 53
Query: 61 QLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGA--RSPIGIQDRIDRMMD 118
FW+ Q+L +SL + A+ ++ + + + +G + + R +
Sbjct: 54 TRFWATQNLNEGLESLGKSADNPYRALVVAGREANDQQGASQSVMQGSLGSGEWVARGLR 113
Query: 119 VAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIE 177
A E + L+ LGS+ S VG+ G V G+ +I ++ + G + E
Sbjct: 114 NAFDEEAARLQNGLAVLGSIGSTAPFVGLFGTVWGIYHALMAIGLSGQASLDHVAGPVGE 173
Query: 178 SLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFS 218
SLI GL V+IP+ + +N + + ++ F +E
Sbjct: 174 SLIMTAFGLFVAIPAVLGFNYVNRGNTRVRQRLHRFMHELH 214
>gi|57237184|ref|YP_178196.1| TonB system transport protein ExbB [Campylobacter jejuni RM1221]
gi|57165988|gb|AAW34767.1| TonB system transport protein ExbB [Campylobacter jejuni RM1221]
gi|315057616|gb|ADT71945.1| Ferric siderophore transport system, biopolymer transport protein
ExbB [Campylobacter jejuni subsp. jejuni S3]
Length = 253
Score = 179 bits (456), Expect = 2e-43, Method: Composition-based stats.
Identities = 52/216 (24%), Positives = 101/216 (46%), Gaps = 10/216 (4%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
+++S+ +L+ VK +I +L +FSIL+W+V I K + F +++ Q ++
Sbjct: 40 IELSLSSLYQNADEVVKGVIYILVLFSILAWAVFISKLMQFYFMKKNLDLSIQKIKELKN 99
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
L + ++ + L E + +K I++RI+ + I++++
Sbjct: 100 LNELDQTKDFAGVLSL---------EIQDELEKSEYKNDHIKERIELRLQNTISKQITAS 150
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
LS L S+ ++ +G+ G V G+M F IA + ++ V PGI E+L + GL
Sbjct: 151 KNGLSLLASIGASAPFIGLFGTVWGIMNAFIGIANLGNASLAVVAPGIAEALFATAFGLI 210
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
+IP+ + YN + K ++ AN + R
Sbjct: 211 AAIPAVLFYNYLTRKNLKLMHHLDELANFVYILFHR 246
>gi|119896523|ref|YP_931736.1| putative biopolymer transport protein ExbB [Azoarcus sp. BH72]
gi|119668936|emb|CAL92849.1| putative biopolymer transport protein ExbB [Azoarcus sp. BH72]
Length = 280
Score = 179 bits (456), Expect = 2e-43, Method: Composition-based stats.
Identities = 51/221 (23%), Positives = 95/221 (42%), Gaps = 13/221 (5%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YGL AL+ K ++ L+ I S SW +II K + + RQ + E
Sbjct: 65 NPYGLE-------ALWAGSDAVAKVVLVLMIIMSAGSWYIIIVKLIEQTRMYRQAKAVE- 116
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
W +++ ++L+N I + + + + + D + + AI
Sbjct: 117 GVWKSATIKHGAENLEN--GSPFRFIAEAGLEATNR--HDSLLEHVDLNDWVTLSIHRAI 172
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLI 180
+ + L+FL ++ S VG+ G V G+ +I ++ + G + E+LI
Sbjct: 173 EKVQSRMQNGLAFLATVGSTAPFVGLFGTVWGIYHALTAIGIAGQASIDKVAGPVGEALI 232
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+GL V++P+ + YN + +K Q+ GF NE ++
Sbjct: 233 MTAIGLAVAVPAVLGYNWLVRRNKGVMDQVRGFGNELHTVI 273
>gi|187925355|ref|YP_001896997.1| MotA/TolQ/ExbB proton channel [Burkholderia phytofirmans PsJN]
gi|187716549|gb|ACD17773.1| MotA/TolQ/ExbB proton channel [Burkholderia phytofirmans PsJN]
Length = 238
Score = 179 bits (456), Expect = 2e-43, Method: Composition-based stats.
Identities = 50/216 (23%), Positives = 89/216 (41%), Gaps = 2/216 (0%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
I + +L SI SW +I KS +RQ LFW +L
Sbjct: 7 IIHYLQTSDAITHGVAYVLLAMSIASWCFLIVKSWILTRAKRQATRAIALFWQAPTLSEG 66
Query: 73 CKSLKNHHNIGL-AAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEK 131
+LK + + +A+ + + + +R+ R + A++ +
Sbjct: 67 VAALKRADRERVFTPLAEAALHASEVDIPGALLARVERGERVLRALRQALSASQRRLEFG 126
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSI 190
L S+ S VG+LG V G+ SIA + ++ G + E+LI GL V+I
Sbjct: 127 QVLLASVGSTAPFVGLLGTVWGIYHALGSIAASGQAQIENVAGPVGEALIMTAFGLVVAI 186
Query: 191 PSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
P+ +AYN ++ + +++GFA++ A + E
Sbjct: 187 PAVLAYNVLGRMVRQLSEELDGFAHDLHAYVCAPAE 222
>gi|253997817|ref|YP_003049880.1| MotA/TolQ/ExbB proton channel [Methylovorus sp. SIP3-4]
gi|313199891|ref|YP_004038549.1| mota/tolq/exbb proton channel [Methylovorus sp. MP688]
gi|253984496|gb|ACT49353.1| MotA/TolQ/ExbB proton channel [Methylovorus sp. SIP3-4]
gi|312439207|gb|ADQ83313.1| MotA/TolQ/ExbB proton channel [Methylovorus sp. MP688]
Length = 236
Score = 179 bits (456), Expect = 2e-43, Method: Composition-based stats.
Identities = 46/204 (22%), Positives = 93/204 (45%), Gaps = 6/204 (2%)
Query: 21 GLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHH 80
L V ++ L FS+++W+++ K V Q + +++ FW+ L + + N
Sbjct: 8 SLIVDSVLWTLVAFSVVTWTLLAVKGVQNFRAGYQNKRYKKAFWAAPDLLSAAEI--NDF 65
Query: 81 NIGLAAIFMSAMSEWKKSCDKGARSPIGIQDR---IDRMMDVAIARELEEITEKLSFLGS 137
N A + + + + + G +R ++R + I +E + L+ L S
Sbjct: 66 NGPAARVAQAGFNALRDADTPGQHDLEHSGERQDLLERSLRQQILKERRSLESGLAILAS 125
Query: 138 MSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIPSSIAY 196
+ S VG+ G V G+M I + ++ + G I E+L++ LG+ V++P+ +AY
Sbjct: 126 IGSTSPFVGLFGTVWGIMHALTDIGRLGTASLEVVAGPIGEALVATGLGIAVAVPAVLAY 185
Query: 197 NKFIEDSKKFAMQMEGFANEFSAI 220
N F K + ++ FA + +
Sbjct: 186 NFFTRRLKLASGDLDDFAADLINL 209
>gi|88810217|ref|ZP_01125474.1| MotA/TolQ/ExbB proton channel family protein [Nitrococcus mobilis
Nb-231]
gi|88791847|gb|EAR22957.1| MotA/TolQ/ExbB proton channel family protein [Nitrococcus mobilis
Nb-231]
Length = 255
Score = 179 bits (455), Expect = 2e-43, Method: Composition-based stats.
Identities = 56/219 (25%), Positives = 97/219 (44%), Gaps = 5/219 (2%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
+ Q K I+ L+ S++SW +I+ K+V+ R+ R+F + FW+ S
Sbjct: 7 HALGFINFLQQADGLAKTILALMLFASLISWYLILTKTVHNSLAIRRSRQFLEFFWATPS 66
Query: 69 LETVCKSLKNHHN----IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARE 124
L V L+ LA + A S ++ + D + R + I E
Sbjct: 67 LTAVAAHLEEQQPKDPFSRLAHHGVIASSHHERYGVNRVSTAGSAGDFVTRALRKVIDEE 126
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISIL 183
L+ L S+ S VG+LG V G+ +IA S + + G + E+LI
Sbjct: 127 TARAESGLTLLASIGSTAPFVGLLGTVWGIYHALIAIAQSGSGGLDQVAGPVGEALIMTA 186
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
+GL V+IP+ + YN + ++ +++GFA + A L+
Sbjct: 187 IGLAVAIPAVLGYNFLVRSNRLMLARLDGFAYDLFAFLA 225
>gi|294788257|ref|ZP_06753500.1| biopolymer transport protein ExbB [Simonsiella muelleri ATCC 29453]
gi|294483688|gb|EFG31372.1| biopolymer transport protein ExbB [Simonsiella muelleri ATCC 29453]
Length = 219
Score = 179 bits (455), Expect = 2e-43, Method: Composition-based stats.
Identities = 42/214 (19%), Positives = 97/214 (45%), Gaps = 3/214 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+++ +F + + + + SI +W +I+ + + ++R + LFW +
Sbjct: 1 MNLGLVFQSGDPVLIGVFISMVLMSIATWFLIVYRCIQLAKIKRANHDAYDLFWKADNFT 60
Query: 71 TVCKSLK--NHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+K + +A +++ + K + + D ++R + ++ + +
Sbjct: 61 NAEMQMKTIDSPVSKMALDAIASHRNYANMQQKMLSANLPKSDFLEREIRHSMTKIMHRY 120
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLC 187
LS L S+ S +G+LG V G+ + I+ ++ ++ G I E+L+S +GL
Sbjct: 121 DAGLSVLASVGSTAPFIGLLGTVWGIYHALEGISKAGQMSIAAVAGPIGEALVSTAVGLF 180
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
V+IP+ +AYN +K + ++ FA++ L
Sbjct: 181 VAIPAVLAYNYLSRKNKLLSRKLNDFAHDLHVYL 214
>gi|146341553|ref|YP_001206601.1| biopolymer transport protein ExbB [Bradyrhizobium sp. ORS278]
gi|146194359|emb|CAL78383.1| biopolymer transport protein ExbB; uptake of enterobactin,
tonB-dependent uptake of B colicins [Bradyrhizobium sp.
ORS278]
Length = 302
Score = 179 bits (455), Expect = 2e-43, Method: Composition-based stats.
Identities = 56/224 (25%), Positives = 107/224 (47%), Gaps = 6/224 (2%)
Query: 7 AIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG 66
+ ++S +F++ + VK ++ L + S+ SW+++I KS+ F LRR+ + S
Sbjct: 69 GLDELSPLGMFLKADIVVKAVMIALALASVASWTILIAKSIEFSVLRRRLIGALRKLTSA 128
Query: 67 QSLETVCKSLKNHHNIG---LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAR 123
+SL ++ + A + +A++E + S G S GI++R +
Sbjct: 129 KSLAEAQLAVGQGKDRSGNIAAVLLQAAITEARLSA--GLNSDEGIKERAASSFSEIVRA 186
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISI 182
E + + L ++ + VG+ G V G+M F I+ + N+ V PGI E+L++
Sbjct: 187 EARRVRVGMGLLATVGAISPFVGLFGTVWGIMNSFIGISKSQTTNLAVVAPGIAEALLAT 246
Query: 183 LLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+GL +IP+ I YN F +K + + + +LSR +
Sbjct: 247 AIGLAAAIPAVIIYNHFSRVTKGYLELVNRASGATGRLLSRDLD 290
>gi|82523867|emb|CAI78815.1| biopolymer transport protein [uncultured candidate division WS3
bacterium]
Length = 250
Score = 179 bits (455), Expect = 3e-43, Method: Composition-based stats.
Identities = 56/225 (24%), Positives = 103/225 (45%), Gaps = 13/225 (5%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
+F + ++ K I+ +LF FS+ SW++I+++ + R+ F Q F S +
Sbjct: 24 VFDMIIRAAAFSKIILLILFGFSVSSWAIILERWWFYKRAERRSLAFLQSFRRAASPQAF 83
Query: 73 CKSLKNHHNIGLAAIFMSAMSE------------WKKSCDKGARSPIGIQDRIDRMMDVA 120
++ + A IF A+ + +++ A + + R +++A
Sbjct: 84 RTAVSGGRDNPFARIFDRALKQAENGSEDSHDAGYREMPVATATERTVATESLKRTLELA 143
Query: 121 IARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESL 179
E+ + L FL + S +G+LG V G+M F S+ S ++ V PGI E+L
Sbjct: 144 TTEEIAVLERYLGFLATTGSTCPFIGLLGTVWGVMSSFMSMGREGSASLAVVAPGIAEAL 203
Query: 180 ISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
I GL +IP+ I YN ++ ++F +M+ F+ E L R
Sbjct: 204 IVTAAGLFAAIPAVIGYNLYVNRVQRFTRRMDSFSLELLNALERN 248
>gi|283850883|ref|ZP_06368169.1| MotA/TolQ/ExbB proton channel [Desulfovibrio sp. FW1012B]
gi|283573806|gb|EFC21780.1| MotA/TolQ/ExbB proton channel [Desulfovibrio sp. FW1012B]
Length = 248
Score = 179 bits (455), Expect = 3e-43, Method: Composition-based stats.
Identities = 51/217 (23%), Positives = 94/217 (43%), Gaps = 4/217 (1%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
+A+ V ++ +L S+ WS+I K +R F +L +
Sbjct: 10 FWAMMASATPTVIFVLGILGFMSLGCWSIIFVKLFTLTAAKRDTARDYTRFQEADTLRSA 69
Query: 73 CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIG---IQDRIDRMMDVAIARELEEIT 129
+L + A E + D I R++ +++EL +++
Sbjct: 70 MNALGQSRQSPAFNVGRLAFEELVRMEQADLDPSEKGHIAMDNIRRVLRQGVSQELAKLS 129
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCV 188
LSFL + ++A +G+ G V G+M F SI S + ++ PGI E+L++ +GL V
Sbjct: 130 SSLSFLATSANATPFIGLFGTVWGIMNSFHSIGLMQSAALAAVAPGISEALVATAIGLAV 189
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ I+YN F+ + ++ FA F + R+
Sbjct: 190 AIPAVISYNFFLGYMQAIEGELVNFAGAFLNRIQREV 226
>gi|226942954|ref|YP_002798027.1| ExbB proton channel [Azotobacter vinelandii DJ]
gi|226944266|ref|YP_002799339.1| ExbB proton channel [Azotobacter vinelandii DJ]
gi|226717881|gb|ACO77052.1| ExbB proton channel [Azotobacter vinelandii DJ]
gi|226719193|gb|ACO78364.1| ExbB proton channel [Azotobacter vinelandii DJ]
Length = 236
Score = 179 bits (455), Expect = 3e-43, Method: Composition-based stats.
Identities = 48/203 (23%), Positives = 100/203 (49%), Gaps = 3/203 (1%)
Query: 23 AVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNI 82
+I +L FS+L+W + + K++ F L + R + FW SL++ + L
Sbjct: 11 VEHVVIWVLIGFSVLTWGLALIKAIQFARLGYRDRRLLKHFWQAPSLDSAAE-LVQRQAG 69
Query: 83 GLAAIFMSAMSEWKKS-CDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSA 141
+A + + + ++ I QDR++R + I RE + L+ + S+ S
Sbjct: 70 AVAHVAQAGFAAIREEPGQHDLAHSINHQDRLERALRQQIQRERRSLESGLAVVASIGST 129
Query: 142 GLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIPSSIAYNKFI 200
+G+ G V G+M + I+ S ++ ++ G I +L++ +G+ V++P+ + YN F+
Sbjct: 130 SPFIGLFGTVWGIMEALKGISAAGSASLETVAGPIGAALVATGVGIAVAVPAVLVYNYFL 189
Query: 201 EDSKKFAMQMEGFANEFSAILSR 223
K A ++ FA++F ++ +
Sbjct: 190 RRLKLTAADLDDFAHDFYSLAQK 212
>gi|302189331|ref|ZP_07266004.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. syringae
642]
Length = 230
Score = 179 bits (454), Expect = 3e-43, Method: Composition-based stats.
Identities = 50/206 (24%), Positives = 95/206 (46%), Gaps = 4/206 (1%)
Query: 22 LAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHN 81
L + +TLL IFS+++W++++ K+ L RQ R + FW+ + L+ +
Sbjct: 8 LITQSSMTLLVIFSLVTWALLLGKTFQHWRLTRQNRRYATQFWAARDLKNALHL--PNSE 65
Query: 82 IGLAAIFMSAMSEWKKSCDK-GARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSS 140
LA + + D QD ++R + I +E + + L S+ S
Sbjct: 66 GSLARLTDAGAQALAAPHDSPDLGHSWNRQDLLERSLRQQIHKERRRLESGMILLASIGS 125
Query: 141 AGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIPSSIAYNKF 199
+G+ G V G++ +I+ S ++ + G I E+L++ +G+ V++P+ +AYN F
Sbjct: 126 TAPFIGLFGTVFGIIHALTAISQAKSASIAVVAGPIGEALVATGVGIAVAVPAVLAYNFF 185
Query: 200 IEDSKKFAMQMEGFANEFSAILSRQT 225
K +E FA +F + R
Sbjct: 186 GRRLKLVIADLEEFAVDFLNLSQRNA 211
>gi|330974473|gb|EGH74539.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. aceris str.
M302273PT]
Length = 242
Score = 179 bits (454), Expect = 3e-43, Method: Composition-based stats.
Identities = 54/202 (26%), Positives = 105/202 (51%), Gaps = 5/202 (2%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLA 85
+I LL IFS+ +W + + K V F L+ Q R+F + FW+ SL++ + L + A
Sbjct: 14 AVIWLLVIFSVATWGLALLKGVQFSRLKSQDRKFHKQFWAASSLDSAAQ-LAHEQPGAAA 72
Query: 86 AIFMSAMSEWKKSCDKGARS---PIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAG 142
+ ++ + + + A I QDR++R + I RE + L+ L S+ S
Sbjct: 73 RVALAGYAAIQVADGAQAHDLSQSINHQDRLERALRQQIVRERRSLETGLAILASIGSTS 132
Query: 143 LLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIPSSIAYNKFIE 201
+G+ G V G+M + I+ S ++ ++ G I +L++ +G+ V++P+ + YN F+
Sbjct: 133 PFIGLFGTVWGIMSALKGISAAGSASLETVAGPIGAALVATGVGIAVAVPAVLVYNYFLR 192
Query: 202 DSKKFAMQMEGFANEFSAILSR 223
K A ++ FA++F ++ +
Sbjct: 193 RLKLTAADLDDFAHDFYSLAQK 214
>gi|299134911|ref|ZP_07028103.1| tonB-system energizer ExbB [Afipia sp. 1NLS2]
gi|298590721|gb|EFI50924.1| tonB-system energizer ExbB [Afipia sp. 1NLS2]
Length = 307
Score = 179 bits (454), Expect = 3e-43, Method: Composition-based stats.
Identities = 49/220 (22%), Positives = 101/220 (45%), Gaps = 4/220 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
D+S +++FM + VK ++ L S+++W++ K +++ + + + +
Sbjct: 80 PHDLSPWSMFMSADIVVKLVMIGLAFASLMTWTICFAKMREQFVAQQRLKAALRTVSNSR 139
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+L +L + L++ A+ E + S G GI++R + E
Sbjct: 140 TLAEARMALGTGKTV-LSSFLAMAVHEVRLS--SGIVGDTGIKERAASLFAELTRSEARR 196
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
+ + L ++ + VG+ G V G+M F I+ + N+ V PGI E+L++ +GL
Sbjct: 197 MRLGMGMLATIGATAPFVGLFGTVWGIMNSFIGISKMQTTNLAVVAPGIAEALLATAMGL 256
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ I YN F +K++ + + +LSR +
Sbjct: 257 VAAIPAVIIYNHFSRVTKRYLELVSQASGAAGRLLSRDLD 296
>gi|154251452|ref|YP_001412276.1| MotA/TolQ/ExbB proton channel [Parvibaculum lavamentivorans DS-1]
gi|154155402|gb|ABS62619.1| MotA/TolQ/ExbB proton channel [Parvibaculum lavamentivorans DS-1]
Length = 299
Score = 179 bits (454), Expect = 3e-43, Method: Composition-based stats.
Identities = 54/218 (24%), Positives = 92/218 (42%), Gaps = 11/218 (5%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YGL+ AL+ Q K + +L I S+ SW V+I K L QF +
Sbjct: 83 NPYGLS-------ALWEQGDFVSKATLLILAIMSMGSWYVLITKLFEQRRLFDQFNRVIK 135
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
LF +L ++L ++ AI E +KG S + + + ++ A+
Sbjct: 136 LFAPTDTLRAGIEALPKRNSYR--AIAEDG-EEAVAQFNKGLSSEVTLSEWSTAALNRAV 192
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLI 180
++ L+FL ++ S VG+ G V G+ +I ++ + G + E+LI
Sbjct: 193 DTLAAKLQGGLAFLATVGSTAPFVGLFGTVWGIYHALVAIGVSGQASIDKVAGPVGEALI 252
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFS 218
+GL V++P+ + YN +K FA E
Sbjct: 253 MTAIGLAVAVPAVLGYNLLTRRNKGVVSHARRFATEVH 290
>gi|28869675|ref|NP_792294.1| TonB system transport protein ExbB [Pseudomonas syringae pv. tomato
str. DC3000]
gi|301386225|ref|ZP_07234643.1| TonB system transport protein ExbB [Pseudomonas syringae pv. tomato
Max13]
gi|302060048|ref|ZP_07251589.1| TonB system transport protein ExbB [Pseudomonas syringae pv. tomato
K40]
gi|302134430|ref|ZP_07260420.1| TonB system transport protein ExbB [Pseudomonas syringae pv. tomato
NCPPB 1108]
gi|28852917|gb|AAO55989.1| TonB system transport protein ExbB [Pseudomonas syringae pv. tomato
str. DC3000]
Length = 242
Score = 179 bits (454), Expect = 3e-43, Method: Composition-based stats.
Identities = 53/202 (26%), Positives = 103/202 (50%), Gaps = 5/202 (2%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLA 85
+I LL IFS+ +W + + K V F L+ Q R+F + FW+ SL++ + L A
Sbjct: 14 AVIWLLVIFSVATWGLALLKGVQFSRLKAQDRKFHKQFWAASSLDSAAQ-LAQEQPGAAA 72
Query: 86 AIFMSAMSEWKK---SCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAG 142
+ ++ + + + I QDR++R + I RE + L+ L S+ S
Sbjct: 73 RVALAGYAAIQVPDGAQANDLSQSINHQDRLERALRQQIVRERRSLETGLAILASIGSTS 132
Query: 143 LLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIPSSIAYNKFIE 201
+G+ G V G+M + I+ S ++ ++ G I +L++ +G+ V++P+ + YN F+
Sbjct: 133 PFIGLFGTVWGIMSALKGISAAGSASLETVAGPIGAALVATGVGIAVAVPAVLVYNYFLR 192
Query: 202 DSKKFAMQMEGFANEFSAILSR 223
K A ++ FA++F ++ +
Sbjct: 193 RLKLTAADLDDFAHDFYSLAQK 214
>gi|237808556|ref|YP_002892996.1| MotA/TolQ/ExbB proton channel [Tolumonas auensis DSM 9187]
gi|237500817|gb|ACQ93410.1| MotA/TolQ/ExbB proton channel [Tolumonas auensis DSM 9187]
Length = 253
Score = 179 bits (454), Expect = 3e-43, Method: Composition-based stats.
Identities = 53/219 (24%), Positives = 103/219 (47%), Gaps = 4/219 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
+ + + + Q LL + S+ +W I+ K LRR + F FWS +
Sbjct: 7 VTQMGLAHVLTQTSGMGLIPAVLLLLMSVATWYWIVLKVYQSWKLRRNTKAFLAAFWSCR 66
Query: 68 SLETVCKS-LKNHHNIGLAAIFMSAMSEWKKSC--DKGARSPIGIQDRIDRMMDVAIARE 124
+L+ V + LK A + +S + ++ D+G ++ + R + ++ R
Sbjct: 67 NLKQVEEQVLKQVKPEPCAELMISGLQAARQVQNPDQGLVEMGSREEFVLRALRRSVTRS 126
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISIL 183
+ L+ L S+ SA VG+ G V G+ I+ + + + G + E+LI
Sbjct: 127 TLRLEAGLTLLASVGSAAPFVGLFGTVWGIYNALIGISVSGQSTLDKVAGPVGEALIMTA 186
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
GL V++P+ +AYN F+ ++ + +++GFA++ A+LS
Sbjct: 187 FGLAVALPAVLAYNAFVRMNRVYLAELDGFAHDVFALLS 225
>gi|330966843|gb|EGH67103.1| TonB system transport protein ExbB [Pseudomonas syringae pv.
actinidiae str. M302091]
Length = 242
Score = 179 bits (454), Expect = 3e-43, Method: Composition-based stats.
Identities = 53/202 (26%), Positives = 103/202 (50%), Gaps = 5/202 (2%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLA 85
+I LL IFS+ +W + + K V F L+ Q R+F + FW+ SL++ + L A
Sbjct: 14 AVIWLLVIFSVATWGLALLKGVQFSRLKAQDRKFHKQFWAASSLDSAAQ-LAQQQPGAAA 72
Query: 86 AIFMSAMSEWKK---SCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAG 142
+ ++ + + + I QDR++R + I RE + L+ L S+ S
Sbjct: 73 RVALAGYAAIQVPDGAQANDLSQSINHQDRLERALRQQIVRERRSLETGLAILASIGSTS 132
Query: 143 LLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIPSSIAYNKFIE 201
+G+ G V G+M + I+ S ++ ++ G I +L++ +G+ V++P+ + YN F+
Sbjct: 133 PFIGLFGTVWGIMSALKGISAAGSASLETVAGPIGAALVATGVGIAVAVPAVLVYNYFLR 192
Query: 202 DSKKFAMQMEGFANEFSAILSR 223
K A ++ FA++F ++ +
Sbjct: 193 RLKLTAADLDDFAHDFYSLAQK 214
>gi|332527210|ref|ZP_08403280.1| biopolymer transport ExbB protein [Rubrivivax benzoatilyticus JA2]
gi|332111632|gb|EGJ11613.1| biopolymer transport ExbB protein [Rubrivivax benzoatilyticus JA2]
Length = 265
Score = 179 bits (454), Expect = 3e-43, Method: Composition-based stats.
Identities = 52/221 (23%), Positives = 93/221 (42%), Gaps = 11/221 (4%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YGL AL+MQ K + +L I S+ SW +I K ++ + RE +
Sbjct: 50 NPYGLQ-------ALWMQGDFVAKGTLIILVIMSMGSWYIIFTKLYEQRSMMKSARESAE 102
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
FW S++ +L+ I S + + I + ++ A+
Sbjct: 103 AFWKANSVKAGVTALE--EGSAFRYIAESGIKA-SDHHEGTMVESIDKHTWVTMSVERAV 159
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLI 180
+T+ L+FL ++ S VG+ G V G+ I ++ + G + E+LI
Sbjct: 160 GNIQGRLTDGLAFLATVGSTAPFVGLFGTVWGIYNALVRIGISGQASIDKVAGPVGEALI 219
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+GL V++P+ + YN I +K Q+ F+ + +L
Sbjct: 220 MTAIGLAVAVPAVMGYNWLIRRNKAVLDQVRSFSADLHNVL 260
>gi|329119626|ref|ZP_08248307.1| TonB family auxiliary protein ExbB [Neisseria bacilliformis ATCC
BAA-1200]
gi|327464223|gb|EGF10527.1| TonB family auxiliary protein ExbB [Neisseria bacilliformis ATCC
BAA-1200]
Length = 220
Score = 179 bits (454), Expect = 3e-43, Method: Composition-based stats.
Identities = 45/221 (20%), Positives = 103/221 (46%), Gaps = 6/221 (2%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+++ +F Q + +L I S+ +W+V+I +++ + + L W+ +SL+
Sbjct: 1 MNLLHVFQQGDFVLITAFIILIIMSMATWAVMIVRAIKLRQAKAGNARVKDLIWNAKSLD 60
Query: 71 TVCKSLKNHHNIGLAAIFMSAMS---EWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
K + + ++ + + A+ + ++ D S + + R + I++ +
Sbjct: 61 EAVKIARENE-SPMSDMLLDAVKTDEAFHRNKDANLASGVPFGPYLMRQIQYNISQIMRR 119
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGL 186
L+ L S+ S+ +G+ G V G+ +I ++ ++ G I E+LI+ +GL
Sbjct: 120 FDGGLTALASIGSSAPFIGLFGTVWGIHKALLNIGQSGQVSIAAVAGPIGEALIATAVGL 179
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA-ILSRQTE 226
+IP+ +AYN + +K + F ++ A IL++ E
Sbjct: 180 FAAIPAVLAYNFLVRGNKTLLQDLNAFGHDLHAQILNKNGE 220
>gi|75676490|ref|YP_318911.1| MotA/TolQ/ExbB proton channel [Nitrobacter winogradskyi Nb-255]
gi|74421360|gb|ABA05559.1| outer membrane transport energization protein ExbB [Nitrobacter
winogradskyi Nb-255]
Length = 320
Score = 179 bits (454), Expect = 3e-43, Method: Composition-based stats.
Identities = 57/221 (25%), Positives = 102/221 (46%), Gaps = 4/221 (1%)
Query: 7 AIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG 66
+ ++S +++FM + V+ ++ L S+++W++ I K RR R
Sbjct: 91 SPHELSPWSMFMSADIVVQLVMIGLAFASLVTWTICIAKLAELSLARRALRAALNKIGDA 150
Query: 67 QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
+SL +L + LA++ SAM E + S G S GI++R + E
Sbjct: 151 RSLAEAQMALGAREGV-LASLLASAMHEARLSA--GISSDAGIKERAASSFAEIVRAESR 207
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLG 185
I + L ++ + VG+ G V G+M F I+ + N+ V PGI E+L++ LG
Sbjct: 208 RIRLGMGLLATIGATSPFVGLFGTVWGIMNSFIGISKSQTTNLAVVAPGIAEALLATALG 267
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
L +IP+ I YN F ++ + + + +LSR +
Sbjct: 268 LVAAIPAVIIYNYFARVTRGYTELVGRASGAAGRLLSRDLD 308
>gi|75675459|ref|YP_317880.1| MotA/TolQ/ExbB proton channel [Nitrobacter winogradskyi Nb-255]
gi|74420329|gb|ABA04528.1| outer membrane transport energization protein ExbB [Nitrobacter
winogradskyi Nb-255]
Length = 318
Score = 179 bits (454), Expect = 3e-43, Method: Composition-based stats.
Identities = 58/227 (25%), Positives = 104/227 (45%), Gaps = 4/227 (1%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
+N + ++S +++FM + V+ ++ L S+++W++ I K RR R
Sbjct: 83 LNPDTASPHELSPWSMFMSADIVVQLVMIGLAFASLVTWTICIAKLAELSLARRALRAAL 142
Query: 61 QLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVA 120
+SL +L + LA++ SAM E + S G S GI++R
Sbjct: 143 NKIGDARSLAEAQMALGAREGV-LASLLASAMHEARLSA--GISSDAGIKERAASSFAEI 199
Query: 121 IARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESL 179
+ E I + L ++ + VG+ G V G+M F I+ + N+ V PGI E+L
Sbjct: 200 VRAESRRIRLGMGLLATIGATSPFVGLFGTVWGIMNSFIGISKSQTTNLAVVAPGIAEAL 259
Query: 180 ISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
++ LGL +IP+ I YN F ++ + + + +LSR +
Sbjct: 260 LATALGLVAAIPAVIIYNYFARVTRGYTELVGRASGAAGRLLSRDLD 306
>gi|251790231|ref|YP_003004952.1| MotA/TolQ/ExbB proton channel [Dickeya zeae Ech1591]
gi|247538852|gb|ACT07473.1| MotA/TolQ/ExbB proton channel [Dickeya zeae Ech1591]
Length = 232
Score = 179 bits (454), Expect = 3e-43, Method: Composition-based stats.
Identities = 53/200 (26%), Positives = 103/200 (51%), Gaps = 4/200 (2%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLA 85
+I LL FS+++WS+ + K V + RR+ ++F QLFW ++++ + + H LA
Sbjct: 14 GVILLLLFFSLVTWSIGLLKLVQYARHRRRNQQFRQLFWQQENIDAALRDVA--HPGALA 71
Query: 86 AIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLV 145
+ + ++ D+ +QDR++R + I RE + L+ L S+ + +
Sbjct: 72 NLARATQLTLERVKDR-ITPIAHLQDRVERALQQQIQRERRTLETGLALLASIGTTSPFI 130
Query: 146 GILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIPSSIAYNKFIEDSK 204
G+ G V G+M Q+I S + ++ G I +LI+ +G+ V++P+ + YN F+ K
Sbjct: 131 GLFGTVWGIMAALQTIGQSGSAGLDTVAGPIGNALIATGIGIAVAVPAVLIYNYFLRRLK 190
Query: 205 KFAMQMEGFANEFSAILSRQ 224
M+ FA++ ++ Q
Sbjct: 191 LEVADMDDFAHDIYSVAQAQ 210
>gi|330876907|gb|EGH11056.1| TonB system transport protein ExbB [Pseudomonas syringae pv.
morsprunorum str. M302280PT]
Length = 242
Score = 179 bits (454), Expect = 3e-43, Method: Composition-based stats.
Identities = 53/202 (26%), Positives = 103/202 (50%), Gaps = 5/202 (2%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLA 85
+I LL IFS+ +W + + K V F L+ Q R+F + FW+ SL++ + L A
Sbjct: 14 AVIWLLVIFSVATWGLALLKGVQFSRLKAQDRKFHKQFWAASSLDSAAQ-LAQEQPGAAA 72
Query: 86 AIFMSAMSEWKK---SCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAG 142
+ ++ + + + I QDR++R + I RE + L+ L S+ S
Sbjct: 73 RVALAGYAAIQVPDGAQANDLSQSINHQDRLERALRQQIVRERRSLETGLAILASIGSTS 132
Query: 143 LLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIPSSIAYNKFIE 201
+G+ G V G+M + I+ S ++ ++ G I +L++ +G+ V++P+ + YN F+
Sbjct: 133 PFIGLFGTVWGIMSALKGISAAGSASLETVAGPIGAALVATGVGIAVAVPAVLVYNYFLR 192
Query: 202 DSKKFAMQMEGFANEFSAILSR 223
K A ++ FA++F ++ +
Sbjct: 193 RLKLTAADLDDFAHDFYSLAQK 214
>gi|148254956|ref|YP_001239541.1| biopolymer transport protein ExbB [Bradyrhizobium sp. BTAi1]
gi|146407129|gb|ABQ35635.1| outer membrane transport energization protein ExbB [Bradyrhizobium
sp. BTAi1]
Length = 313
Score = 179 bits (454), Expect = 3e-43, Method: Composition-based stats.
Identities = 55/202 (27%), Positives = 103/202 (50%), Gaps = 4/202 (1%)
Query: 7 AIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG 66
+ ++S + +F++ + VK ++ L + S+ SW+++I KS+ F LRR+ + +
Sbjct: 77 GLDELSPWGMFLKADIVVKAVMIALALASVASWTILIAKSIEFSILRRKLGGALRKLTAA 136
Query: 67 QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
+SL +L N N+ A + +A++E + S G S GI++R + E
Sbjct: 137 KSLAEAQLALGNGRNVA-AVLLQAALTEARLSA--GLGSDEGIKERAASSFAEIVRAEGR 193
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLG 185
+ + L ++ + VG+ G V G+M F I+ + N+ V PGI E+L++ +G
Sbjct: 194 RVRTGMGLLATVGAISPFVGLFGTVWGIMNSFIGISKSQTTNLAVVAPGIAEALLATAIG 253
Query: 186 LCVSIPSSIAYNKFIEDSKKFA 207
L +IP+ I YN F +K +
Sbjct: 254 LAAAIPAVIIYNHFSRVTKGYL 275
>gi|330958698|gb|EGH58958.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. maculicola
str. ES4326]
Length = 240
Score = 179 bits (454), Expect = 4e-43, Method: Composition-based stats.
Identities = 54/202 (26%), Positives = 103/202 (50%), Gaps = 5/202 (2%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLA 85
+I LL IFS+ +W + + K V F L+ Q R+F + FW+ SL++ + L + A
Sbjct: 14 AVIWLLVIFSVATWGLALLKGVQFSRLKAQDRKFHKQFWAASSLDSAAQ-LAHEQPGAAA 72
Query: 86 AIFMSAMSEWKKSCDKGARS---PIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAG 142
+ ++ + S I QDR++R + I RE + L+ L S+ S
Sbjct: 73 RVALAGYVAIQVSDGAQVNDLSQSINHQDRLERALRQQIVRERRSLETGLAILASIGSTS 132
Query: 143 LLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIPSSIAYNKFIE 201
+G+ G V G+M + I+ S ++ ++ G I +L++ +G+ V++P+ + YN F+
Sbjct: 133 PFIGLFGTVWGIMSALKGISAAGSASLETVAGPIGAALVATGVGIAVAVPAVLVYNYFLR 192
Query: 202 DSKKFAMQMEGFANEFSAILSR 223
K A ++ FA++F ++ +
Sbjct: 193 RLKLTAADLDDFAHDFYSLAQK 214
>gi|57168649|ref|ZP_00367781.1| biopolymer transport protein Cj0179 [Campylobacter coli RM2228]
gi|57019930|gb|EAL56610.1| biopolymer transport protein Cj0179 [Campylobacter coli RM2228]
Length = 253
Score = 179 bits (454), Expect = 4e-43, Method: Composition-based stats.
Identities = 51/216 (23%), Positives = 99/216 (45%), Gaps = 10/216 (4%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
+++S+ +L+ VK +I +L +FS+L+W+V I K + F +++ ++
Sbjct: 40 IELSLSSLYQNADEVVKGVIYILVLFSVLAWAVFISKLMQFYFMKKNLDFSIHKIKELKN 99
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
L + G A + E + +K I++RI+ + I++++
Sbjct: 100 LNEL------DQTKGFAGVLS---LEIQDELEKSEYKNDHIKERIELRLQNTISKQITAS 150
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
LS L S+ ++ +G+ G V G+M F IA + ++ V PGI E+L + GL
Sbjct: 151 KNGLSLLASIGASAPFIGLFGTVWGIMNAFIGIANLGNASLAVVAPGIAEALFATAFGLI 210
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
+IP+ + YN + K ++ AN + R
Sbjct: 211 AAIPAVLFYNYLTRKNLKLMHHLDELANFVYILFHR 246
>gi|86153953|ref|ZP_01072156.1| biopolymer transport protein [Campylobacter jejuni subsp. jejuni
HB93-13]
gi|88597218|ref|ZP_01100453.1| TonB system transport protein ExbB [Campylobacter jejuni subsp.
jejuni 84-25]
gi|218561858|ref|YP_002343637.1| biopolymer transport protein [Campylobacter jejuni subsp. jejuni
NCTC 11168]
gi|85842914|gb|EAQ60126.1| biopolymer transport protein [Campylobacter jejuni subsp. jejuni
HB93-13]
gi|88190279|gb|EAQ94253.1| TonB system transport protein ExbB [Campylobacter jejuni subsp.
jejuni 84-25]
gi|112359564|emb|CAL34348.1| biopolymer transport protein [Campylobacter jejuni subsp. jejuni
NCTC 11168]
gi|284925471|gb|ADC27823.1| TonB system transport protein ExbB [Campylobacter jejuni subsp.
jejuni IA3902]
gi|315927781|gb|EFV07107.1| biopolymer transport protein exbB [Campylobacter jejuni subsp.
jejuni DFVF1099]
gi|315929096|gb|EFV08327.1| biopolymer transport protein exbB [Campylobacter jejuni subsp.
jejuni 305]
Length = 253
Score = 179 bits (454), Expect = 4e-43, Method: Composition-based stats.
Identities = 52/216 (24%), Positives = 101/216 (46%), Gaps = 10/216 (4%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
+++S+ +L+ VK +I +L +FSIL+W+V I K + F +++ Q ++
Sbjct: 40 IELSLSSLYQNADEVVKGVIYILVLFSILAWAVFISKLMQFYFMKKNLDLSIQKIKELKN 99
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
L + ++ + L E + +K I++RI+ + I++++
Sbjct: 100 LNELDQTKDFAGVLSL---------EIQDELEKSEYKNDHIKERIELRLQNTISKQITAS 150
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
LS L S+ ++ +G+ G V G+M F IA + ++ V PGI E+L + GL
Sbjct: 151 KNGLSLLASIGASAPFIGLFGTVWGIMNAFIGIANLGNASLAVVAPGIAEALFATAFGLI 210
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
+IP+ + YN + K ++ AN + R
Sbjct: 211 AAIPAVLFYNYLTRKNLKLMHHLDELANFVYILFHR 246
>gi|225872184|ref|YP_002753639.1| transporter, MotA/TolQ/ExbB proton channel family [Acidobacterium
capsulatum ATCC 51196]
gi|225792744|gb|ACO32834.1| transporter, MotA/TolQ/ExbB proton channel family [Acidobacterium
capsulatum ATCC 51196]
Length = 254
Score = 178 bits (453), Expect = 4e-43, Method: Composition-based stats.
Identities = 47/212 (22%), Positives = 92/212 (43%), Gaps = 3/212 (1%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
+ + + ++ LL I SI SW +I KS Q R F + F L+ +
Sbjct: 23 LLQMIGRSSGTAIAVLVLLLIASIWSWVIIFAKSSALRRANMQSRRFLRAFRKATRLQDI 82
Query: 73 CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKL 132
+ L +F +K+ G P ++R A + L + E++
Sbjct: 83 AAVSEQFKPSPLVNVFDDVYETYKR--QTGGFGPPRNITTLERAAMSASSESLTILEERM 140
Query: 133 SFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIP 191
S+L ++ + VG+ G ++G++ F + + + PG+ E+LI+ GL V++P
Sbjct: 141 SWLATIGAVAPFVGLFGTIMGIVDAFHGLGTAGAATLRAVAPGVSEALITTAAGLIVAVP 200
Query: 192 SSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
+ +AYN+F ++F +++ F E +
Sbjct: 201 AVVAYNQFTAKIREFGSRIDDFTRELINSMEE 232
>gi|330891871|gb|EGH24532.1| biopolymer transport protein ExbB [Pseudomonas syringae pv. mori
str. 301020]
Length = 228
Score = 178 bits (453), Expect = 4e-43, Method: Composition-based stats.
Identities = 54/207 (26%), Positives = 100/207 (48%), Gaps = 6/207 (2%)
Query: 22 LAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHN 81
+ V ++ L +FS+LSW++++ KS ++ + Q ++F + FWS L T + +
Sbjct: 1 MIVPAVLWALILFSVLSWALLLIKSAQYVRQKSQNKQFTKAFWSAPDLLTAAEHSAQYPG 60
Query: 82 IGLAAIFMSAMSEWK----KSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGS 137
LA I S + I DR++R + I +E + + L S
Sbjct: 61 -ALARIANSGFEAMAVDESPRTTQQLAHTINRSDRLERNLRQQIQKERRALESGQAILAS 119
Query: 138 MSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIPSSIAY 196
+ S +G+ G V G+M QSI S ++ ++ G I +L++ +G+ V++P+ + Y
Sbjct: 120 IGSTAPFIGLFGTVWGIMEALQSIGVTGSASLEAVAGPIGHALVATGVGIAVAVPAVLIY 179
Query: 197 NKFIEDSKKFAMQMEGFANEFSAILSR 223
N F+ K M+ FA++F A+ R
Sbjct: 180 NFFLRRLKLAVADMDDFAHDFDALAQR 206
>gi|91780293|ref|YP_555500.1| MotA/TolQ/ExbB proton channel [Burkholderia xenovorans LB400]
gi|91692953|gb|ABE36150.1| outer membrane transport energization protein ExbB [Burkholderia
xenovorans LB400]
Length = 240
Score = 178 bits (453), Expect = 4e-43, Method: Composition-based stats.
Identities = 46/206 (22%), Positives = 99/206 (48%), Gaps = 4/206 (1%)
Query: 21 GLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHH 80
L VK + L +FSI++W++I+ K + R + F++ FWS L +L N
Sbjct: 7 SLIVKGALWALVLFSIVTWALILAKGTQSWRVARNNQRFQKAFWSAGDLPQAA-ALGNPR 65
Query: 81 NIGLAAIFMSAMSEWKKSCD--KGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSM 138
+ L + +A + ++ + + ++R++ I +E + L+ L S+
Sbjct: 66 DSALGRVAHAAFTALTETSEGLHDLEHSWDRLESLERLLRQQIVKERGSLESGLAILASV 125
Query: 139 SSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIPSSIAYN 197
S VG+ G V G++ +I+ + ++ + G I E+L++ +G+ V++P+ +AYN
Sbjct: 126 GSTAPFVGLFGTVFGIVHAMTAISQNGTADIGVVAGPIGEALVTTGVGIAVAVPAVLAYN 185
Query: 198 KFIEDSKKFAMQMEGFANEFSAILSR 223
F+ K ++ F + ++ +
Sbjct: 186 FFVRRLKVTGGVLDDFGTDLISLAQK 211
>gi|66047708|ref|YP_237549.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. syringae
B728a]
gi|63258415|gb|AAY39511.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. syringae
B728a]
Length = 230
Score = 178 bits (453), Expect = 4e-43, Method: Composition-based stats.
Identities = 50/206 (24%), Positives = 94/206 (45%), Gaps = 4/206 (1%)
Query: 22 LAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHN 81
L + + LL IFS+++W++++ K+ L RQ R + FW+ + L+ H
Sbjct: 8 LITQSSMALLVIFSLVTWALLLGKTFQHWRLTRQNRRYATQFWAARDLKNALHL--PHSE 65
Query: 82 IGLAAIFMSAMSEWKKSCDK-GARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSS 140
LA + + D QD ++R + I +E + + L S+ S
Sbjct: 66 GSLARLTDAGAQALAAPHDSPDLGHSWNRQDLLERSLRQQIHKERRRLESGMILLASIGS 125
Query: 141 AGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIPSSIAYNKF 199
+G+ G V G++ +I+ S ++ + G I E+L++ +G+ V++P+ +AYN F
Sbjct: 126 TAPFIGLFGTVFGIIHALSAISQAKSASIAVVAGPIGEALVATGVGIAVAVPAVLAYNFF 185
Query: 200 IEDSKKFAMQMEGFANEFSAILSRQT 225
K +E FA +F + R
Sbjct: 186 GRRLKLVIADLEEFAVDFLNLSQRNA 211
>gi|86149597|ref|ZP_01067827.1| TonB system transport protein ExbB [Campylobacter jejuni subsp.
jejuni CF93-6]
gi|85839865|gb|EAQ57124.1| TonB system transport protein ExbB [Campylobacter jejuni subsp.
jejuni CF93-6]
Length = 253
Score = 178 bits (453), Expect = 5e-43, Method: Composition-based stats.
Identities = 52/216 (24%), Positives = 101/216 (46%), Gaps = 10/216 (4%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
+++S+ +L+ VK +I +L +FSIL+W+V I K + F +++ Q ++
Sbjct: 40 IELSLSSLYQNADEVVKGVIYILVLFSILAWAVFISKLMQFYFMKKNLDLSIQKIKELKN 99
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
L + ++ + L E + +K I++RI+ + I++++
Sbjct: 100 LNELDQTKDFAGVLSL---------EIQDELEKSEYKNDHIKERIELRLQNTISKQITAS 150
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
LS L S+ ++ +G+ G V G+M F IA + ++ V PGI E+L + GL
Sbjct: 151 KNGLSLLASIGASAPFIGLFGTVWGIMNAFIGIANLGNASLAVVAPGIAEALFATAFGLI 210
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
+IP+ + YN + K ++ AN + R
Sbjct: 211 AAIPAVLFYNYLTRKNLKLMHHLDELANFVYILFHR 246
>gi|85713906|ref|ZP_01044895.1| MotA/TolQ/ExbB proton channel [Nitrobacter sp. Nb-311A]
gi|85716372|ref|ZP_01047344.1| MotA/TolQ/ExbB proton channel [Nitrobacter sp. Nb-311A]
gi|85696729|gb|EAQ34615.1| MotA/TolQ/ExbB proton channel [Nitrobacter sp. Nb-311A]
gi|85699032|gb|EAQ36900.1| MotA/TolQ/ExbB proton channel [Nitrobacter sp. Nb-311A]
Length = 232
Score = 178 bits (453), Expect = 5e-43, Method: Composition-based stats.
Identities = 51/214 (23%), Positives = 97/214 (45%), Gaps = 6/214 (2%)
Query: 16 LFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKS 75
+FMQ + VK ++ L S+++W++ + + V RR+ + + +L
Sbjct: 1 MFMQADIIVKAVMIGLAFASLVTWTIWLARGVELAASRRRAQSCLRKLERAGTLAAARAE 60
Query: 76 LKN--HHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLS 133
+ ++ + +A +E ++S D S GI++R+ + A+ +I
Sbjct: 61 IAEGWTGKGPVSDLMEAAENECRRSND---LSSEGIKERLAIALSRIEAKAGRDIARGTG 117
Query: 134 FLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPS 192
L ++ + VG+ G V G+M F I+ + N+ V PGI E+L++ LGL +IP+
Sbjct: 118 LLATIGATAPFVGLFGTVWGIMNAFIGISHSKTTNLAVVAPGIAEALLATALGLVAAIPA 177
Query: 193 SIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
I YN F + + + E +SR E
Sbjct: 178 VIIYNVFARALSSYRALLSDASGEIIQHISRDLE 211
>gi|299066429|emb|CBJ37614.1| Biopolymer transport protein [Ralstonia solanacearum CMR15]
Length = 243
Score = 178 bits (453), Expect = 5e-43, Method: Composition-based stats.
Identities = 52/235 (22%), Positives = 100/235 (42%), Gaps = 13/235 (5%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
+ ++ + L+ Q + + LL + S+ SW VI+ K+ + I L+ + E+ FW
Sbjct: 1 MQELGLSHLWTQGDIVARGTALLLLLMSLASWIVILTKAWDLIRLKSMAQGAEKRFWHSD 60
Query: 68 SLETVCKSLKNHHNIGLAAIFMSA--MSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
+ +L + + A+ + ++ ++ + I D I R + AI +
Sbjct: 61 DFDHAMHTLGSSKDNPFYALAQTGREATQHHRASHPQLHDVMDISDWITRSLKSAIDESV 120
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILL 184
++ L+ L S+ S VG+ G V G+ I + + G + ESLI
Sbjct: 121 GQMQSGLAVLASVGSTAPFVGLFGTVWGIYHALIGIGAVGVPTIDKVAGPVGESLIMTAF 180
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL----------SRQTEGNI 229
GL V+IP+ + YN +K ++ FA++ A +RQ + N+
Sbjct: 181 GLAVAIPAVLGYNALTRGNKSVIAKLNRFAHDLHAYFVTGARLRPGSARQDDANV 235
>gi|253995474|ref|YP_003047538.1| MotA/TolQ/ExbB proton channel [Methylotenera mobilis JLW8]
gi|253982153|gb|ACT47011.1| MotA/TolQ/ExbB proton channel [Methylotenera mobilis JLW8]
Length = 241
Score = 178 bits (453), Expect = 5e-43, Method: Composition-based stats.
Identities = 51/209 (24%), Positives = 96/209 (45%), Gaps = 7/209 (3%)
Query: 21 GLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHH 80
+ V+ ++ L S ++W++I+ KS+ +R+Q ++ FWS ++ ++ H
Sbjct: 10 SIVVQAVLLTLIAGSFVTWTLILAKSLQVWLIRKQNVKYRAAFWSARNFQSAADL--KDH 67
Query: 81 NIGLAAIFMSAMSEWKKSCDKGARSPIGIQDR---IDRMMDVAIARELEEITEKLSFLGS 137
N + + K A DR ++R + I +E L L S
Sbjct: 68 NGPAYRVATVGFNVLKDIDSNTANDLQHFGDRQDVLERALRQQIQKERVTRESGLVVLAS 127
Query: 138 MSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIPSSIAY 196
+ S VG+ G V G+M +I S ++ + G I E+LI+ +G+ V++P+ +AY
Sbjct: 128 IGSTAPFVGLFGTVWGIMHALSAIGKTGSASLDVVAGPIGEALIATAVGIAVAVPAVLAY 187
Query: 197 NKFIEDSKKFAMQMEGFANEFSAILSRQT 225
N F+ K + ++ FA + LSR+
Sbjct: 188 NFFLRRLKTSSNNLDDFAEDLIT-LSRKA 215
>gi|28867901|ref|NP_790520.1| TonB system transport protein ExbB [Pseudomonas syringae pv. tomato
str. DC3000]
gi|28851137|gb|AAO54215.1| TonB system transport protein ExbB [Pseudomonas syringae pv. tomato
str. DC3000]
gi|331018208|gb|EGH98264.1| TonB system transport protein ExbB [Pseudomonas syringae pv.
lachrymans str. M302278PT]
Length = 230
Score = 178 bits (452), Expect = 5e-43, Method: Composition-based stats.
Identities = 51/206 (24%), Positives = 96/206 (46%), Gaps = 4/206 (1%)
Query: 22 LAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHN 81
L + +TLL IFS+++W++++ K++ L RQ R + FW+ + L+ H
Sbjct: 8 LITQSSMTLLVIFSLVTWALLLGKTLQHWRLSRQNRRYSTQFWAARDLKNALHL--PHSE 65
Query: 82 IGLAAIFMSAMSEWKKSCDK-GARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSS 140
LA + + D QD ++R + I +E + + L S+ S
Sbjct: 66 GSLARLTDAGAQALATPHDSPDLGHSWNRQDLLERSLRQQIHKERRRLESGMILLASIGS 125
Query: 141 AGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIPSSIAYNKF 199
+G+ G V G++ +I+ S ++ + G I E+L++ +G+ V++P+ +AYN F
Sbjct: 126 TAPFIGLFGTVFGIIHALTAISQAKSASIAVVAGPIGEALVATGVGIAVAVPAVLAYNFF 185
Query: 200 IEDSKKFAMQMEGFANEFSAILSRQT 225
K +E FA +F + R
Sbjct: 186 GRRMKLVIADLEEFAVDFLNLSQRNA 211
>gi|82618530|gb|AAO67510.2| putative ExbB [Pseudomonas syringae pv. tagetis]
Length = 230
Score = 178 bits (452), Expect = 5e-43, Method: Composition-based stats.
Identities = 52/206 (25%), Positives = 95/206 (46%), Gaps = 4/206 (1%)
Query: 22 LAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHN 81
L + +TLL IFS+++W++++ KS L RQ R + FW+ + L+ H
Sbjct: 8 LITQSSMTLLVIFSLVTWALLLGKSFQHWRLTRQNRRYAAQFWAARDLKNALHL--PHSE 65
Query: 82 IGLAAIFMSAMSEWKKSCDK-GARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSS 140
LA + + D QD ++R + I +E + + L S+ S
Sbjct: 66 GSLARLTDAGAQALAAPHDSPDLGHSWNRQDLLERSLRQQIHKERRRLESGMILLASIGS 125
Query: 141 AGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIPSSIAYNKF 199
+G+ G V G++ +I+ S ++ + G I E+L++ +G+ V++P+ +AYN F
Sbjct: 126 TAPFIGLFGTVFGIIHALSAISQARSASIAVVAGPIGEALVATGVGIAVAVPAVLAYNFF 185
Query: 200 IEDSKKFAMQMEGFANEFSAILSRQT 225
K +E FA +F + R
Sbjct: 186 GRRLKLVIADLEEFAVDFLNLSQRNA 211
>gi|213969265|ref|ZP_03397403.1| TonB system transport protein ExbB [Pseudomonas syringae pv. tomato
T1]
gi|301381769|ref|ZP_07230187.1| TonB system transport protein ExbB [Pseudomonas syringae pv. tomato
Max13]
gi|302061031|ref|ZP_07252572.1| TonB system transport protein ExbB [Pseudomonas syringae pv. tomato
K40]
gi|302133871|ref|ZP_07259861.1| TonB system transport protein ExbB [Pseudomonas syringae pv. tomato
NCPPB 1108]
gi|213925943|gb|EEB59500.1| TonB system transport protein ExbB [Pseudomonas syringae pv. tomato
T1]
gi|330877592|gb|EGH11741.1| TonB system transport protein ExbB [Pseudomonas syringae pv.
morsprunorum str. M302280PT]
Length = 230
Score = 178 bits (452), Expect = 5e-43, Method: Composition-based stats.
Identities = 51/206 (24%), Positives = 96/206 (46%), Gaps = 4/206 (1%)
Query: 22 LAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHN 81
L + +TLL IFS+++W++++ K++ L RQ R + FW+ + L+ H
Sbjct: 8 LITQSSMTLLVIFSLVTWALLLGKTLQHWRLSRQNRRYSTQFWAARDLKNALHL--PHSE 65
Query: 82 IGLAAIFMSAMSEWKKSCDK-GARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSS 140
LA + + D QD ++R + I +E + + L S+ S
Sbjct: 66 GSLARLTDAGAQALATPHDSPDLGHSWNRQDLLERSLRQQIHKERRRLESGMILLASIGS 125
Query: 141 AGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIPSSIAYNKF 199
+G+ G V G++ +I+ S ++ + G I E+L++ +G+ V++P+ +AYN F
Sbjct: 126 TAPFIGLFGTVFGIIHALTAISQAKSASIAVVAGPIGEALVATGVGIAVAVPAVLAYNFF 185
Query: 200 IEDSKKFAMQMEGFANEFSAILSRQT 225
K +E FA +F + R
Sbjct: 186 GRRMKLVIADLEEFAVDFLNLSQRNA 211
>gi|57505753|ref|ZP_00371679.1| biopolymer transport protein Cj0179 [Campylobacter upsaliensis
RM3195]
gi|57016026|gb|EAL52814.1| biopolymer transport protein Cj0179 [Campylobacter upsaliensis
RM3195]
Length = 249
Score = 178 bits (452), Expect = 5e-43, Method: Composition-based stats.
Identities = 52/216 (24%), Positives = 101/216 (46%), Gaps = 10/216 (4%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
+++S+ +L+ VK +I +L +FSIL+W+V I K + F +++ Q ++
Sbjct: 36 IELSLSSLYQNADEVVKGVIYILVLFSILAWAVFISKLMQFYFMKKNLDLSIQKIKELKN 95
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
L + ++ + L E + +K I++RI+ + I++++
Sbjct: 96 LNELDQTKDFAGVLSL---------EIQDELEKSEYKNDHIKERIELRLQNTISKQITAS 146
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
LS L S+ ++ +G+ G V G+M F IA + ++ V PGI E+L + GL
Sbjct: 147 KNGLSLLASIGASAPFIGLFGTVWGIMNAFIGIANLGNASLAVVAPGIAEALFATAFGLI 206
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
+IP+ + YN + K ++ AN + R
Sbjct: 207 AAIPAVLFYNYLTRKNLKLMHHLDELANFVYILFHR 242
>gi|320109153|ref|YP_004184743.1| MotA/TolQ/ExbB proton channel [Terriglobus saanensis SP1PR4]
gi|319927674|gb|ADV84749.1| MotA/TolQ/ExbB proton channel [Terriglobus saanensis SP1PR4]
Length = 251
Score = 178 bits (452), Expect = 5e-43, Method: Composition-based stats.
Identities = 55/220 (25%), Positives = 101/220 (45%), Gaps = 5/220 (2%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG---Q 67
S+ + MG ++ +LFI SI S +V+I +++ F R+Q REF
Sbjct: 32 FSVLGMLKNMGWIDLVVVAILFIMSIWSLAVMIDRALYFSAARKQSREFAPKVAGALKDG 91
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
L+ K LA + S + E++ GA + I + R ++ + A +
Sbjct: 92 RLDEAIKVADRTKKSHLAEVVTSGLQEFRSYGSGGAITEEQI-ESSKRALERSEAIVHAK 150
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
+ L L ++ S +G+ G V+G++ FQ IA S + GI E+L++ GL
Sbjct: 151 LKRGLGSLATIGSTAPFIGLFGTVIGILHAFQQIAQSKSTGIGAVAGGISEALVTTAFGL 210
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
V+IP+ + +N F + F ++M+ ++E +Q+
Sbjct: 211 LVAIPAVMCFNYFTNKVEAFDVEMDNSSSELVDYFIKQSH 250
>gi|257482558|ref|ZP_05636599.1| biopolymer transport protein ExbB, putative [Pseudomonas syringae
pv. tabaci ATCC 11528]
gi|289626255|ref|ZP_06459209.1| biopolymer transport protein ExbB [Pseudomonas syringae pv. aesculi
str. NCPPB3681]
gi|320326518|gb|EFW82569.1| biopolymer transport protein ExbB [Pseudomonas syringae pv.
glycinea str. B076]
gi|330866646|gb|EGH01355.1| biopolymer transport protein ExbB [Pseudomonas syringae pv. aesculi
str. 0893_23]
Length = 228
Score = 178 bits (452), Expect = 5e-43, Method: Composition-based stats.
Identities = 54/207 (26%), Positives = 100/207 (48%), Gaps = 6/207 (2%)
Query: 22 LAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHN 81
+ V ++ L +FS+LSW++++ KS ++ + Q ++F + FWS L T + +
Sbjct: 1 MIVPAVLWALILFSVLSWALLLIKSAQYVRQKSQNKQFTKAFWSAPDLLTAAEHSAQYPG 60
Query: 82 IGLAAIFMSAMSEWK----KSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGS 137
LA I S + I DR++R + I +E + + L S
Sbjct: 61 -ALARIANSGFEAMAVDESPRTTQQLAHTINRSDRLERNLRQQIQKERRALESGQAILAS 119
Query: 138 MSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIPSSIAY 196
+ S +G+ G V G+M QSI S ++ ++ G I +L++ +G+ V++P+ + Y
Sbjct: 120 IGSTAPFIGLFGTVWGIMEALQSIGVTGSASLEAVAGPIGHALVATGVGIAVAVPAVLIY 179
Query: 197 NKFIEDSKKFAMQMEGFANEFSAILSR 223
N F+ K M+ FA++F A+ R
Sbjct: 180 NFFLRRLKLAVADMDDFAHDFDALAQR 206
>gi|330899683|gb|EGH31102.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. japonica
str. M301072PT]
gi|330940953|gb|EGH43894.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. pisi str.
1704B]
Length = 230
Score = 178 bits (452), Expect = 6e-43, Method: Composition-based stats.
Identities = 49/206 (23%), Positives = 94/206 (45%), Gaps = 4/206 (1%)
Query: 22 LAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHN 81
L + + LL IFS+++W++++ K+ L RQ R + FW+ + L+ +
Sbjct: 8 LITQSSMALLVIFSLVTWALLLGKTFQHWRLTRQNRRYATQFWAARDLKNALHL--PNSE 65
Query: 82 IGLAAIFMSAMSEWKKSCDK-GARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSS 140
LA + + D QD ++R + I +E + + L S+ S
Sbjct: 66 GSLARLTDAGAQALAAPHDSPDLGHSWNRQDLLERSLRQQIHKERRRLESGMILLASIGS 125
Query: 141 AGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIPSSIAYNKF 199
+G+ G V G++ +I+ S ++ + G I E+L++ +G+ V++P+ +AYN F
Sbjct: 126 TAPFIGLFGTVFGIIHALSAISQAKSASIAVVAGPIGEALVATGVGIAVAVPAVLAYNFF 185
Query: 200 IEDSKKFAMQMEGFANEFSAILSRQT 225
K +E FA +F + R
Sbjct: 186 GRRLKLVIADLEEFAVDFLNLSQRNA 211
>gi|104784186|ref|YP_610684.1| biopolymer transport protein ExbB [Pseudomonas entomophila L48]
gi|95113173|emb|CAK17901.1| putative biopolymer transport protein ExbB [Pseudomonas entomophila
L48]
Length = 240
Score = 178 bits (452), Expect = 6e-43, Method: Composition-based stats.
Identities = 51/201 (25%), Positives = 103/201 (51%), Gaps = 3/201 (1%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIG-- 83
+I LL FS+ +W++ + K V F+ L+ Q + F Q FW+ SL++ + +
Sbjct: 14 AVIWLLVGFSVATWALALAKVVQFVRLKNQDKRFHQQFWAASSLDSAAEPAHDLPGPAAR 73
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
+A +A++ + I QDR++R + I RE + L+ + S+ S
Sbjct: 74 VAQAGFAAIAVGEPGQASDLSQAINHQDRLERALRQQIVRERRSLETGLAVVASIGSTSP 133
Query: 144 LVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIPSSIAYNKFIED 202
+G+ G V G+M + I+ S ++ ++ G I +L++ +G+ V++P+ + YN F+
Sbjct: 134 FIGLFGTVWGIMEALKGISAAGSASLETVAGPIGAALVATGVGIAVAVPAVLVYNYFLRR 193
Query: 203 SKKFAMQMEGFANEFSAILSR 223
K A ++ FA++F ++ +
Sbjct: 194 LKLTAADLDDFAHDFYSLAQK 214
>gi|66043406|ref|YP_233247.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. syringae
B728a]
gi|71737469|ref|YP_277134.1| biopolymer transport protein ExbB [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|289647956|ref|ZP_06479299.1| biopolymer transport protein ExbB [Pseudomonas syringae pv. aesculi
str. 2250]
gi|298489475|ref|ZP_07007486.1| MotA/TolQ/ExbB proton channel family protein [Pseudomonas
savastanoi pv. savastanoi NCPPB 3335]
gi|63254113|gb|AAY35209.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. syringae
B728a]
gi|71558022|gb|AAZ37233.1| biopolymer transport protein ExbB, putative [Pseudomonas syringae
pv. phaseolicola 1448A]
gi|298156049|gb|EFH97158.1| MotA/TolQ/ExbB proton channel family protein [Pseudomonas
savastanoi pv. savastanoi NCPPB 3335]
gi|320331416|gb|EFW87357.1| biopolymer transport protein ExbB [Pseudomonas syringae pv.
glycinea str. race 4]
gi|331012799|gb|EGH92855.1| biopolymer transport protein ExbB [Pseudomonas syringae pv. tabaci
ATCC 11528]
Length = 235
Score = 178 bits (452), Expect = 6e-43, Method: Composition-based stats.
Identities = 54/208 (25%), Positives = 100/208 (48%), Gaps = 6/208 (2%)
Query: 21 GLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHH 80
+ V ++ L +FS+LSW++++ KS ++ + Q ++F + FWS L T + +
Sbjct: 7 SMIVPAVLWALILFSVLSWALLLIKSAQYVRQKSQNKQFTKAFWSAPDLLTAAEHSAQYP 66
Query: 81 NIGLAAIFMSAMSEWK----KSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLG 136
LA I S + I DR++R + I +E + + L
Sbjct: 67 G-ALARIANSGFEAMAVDESPRTTQQLAHTINRSDRLERNLRQQIQKERRALESGQAILA 125
Query: 137 SMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIPSSIA 195
S+ S +G+ G V G+M QSI S ++ ++ G I +L++ +G+ V++P+ +
Sbjct: 126 SIGSTAPFIGLFGTVWGIMEALQSIGVTGSASLEAVAGPIGHALVATGVGIAVAVPAVLI 185
Query: 196 YNKFIEDSKKFAMQMEGFANEFSAILSR 223
YN F+ K M+ FA++F A+ R
Sbjct: 186 YNFFLRRLKLAVADMDDFAHDFDALAQR 213
>gi|330987984|gb|EGH86087.1| biopolymer transport protein ExbB [Pseudomonas syringae pv.
lachrymans str. M301315]
Length = 235
Score = 178 bits (452), Expect = 6e-43, Method: Composition-based stats.
Identities = 54/208 (25%), Positives = 100/208 (48%), Gaps = 6/208 (2%)
Query: 21 GLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHH 80
+ V ++ L +FS+LSW++++ KS ++ + Q ++F + FWS L T + +
Sbjct: 7 SMIVPAVLWALILFSVLSWALLLIKSAQYVRQKSQNKQFTKAFWSAPDLLTAAEHSAQYP 66
Query: 81 NIGLAAIFMSAMSEWK----KSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLG 136
LA I S + I DR++R + I +E + + L
Sbjct: 67 G-ALARIANSGFEAMAVDESPRTTQQLAHTINRSDRLERNLRQQIQKERRALESGQAILA 125
Query: 137 SMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIPSSIA 195
S+ S +G+ G V G+M QSI S ++ ++ G I +L++ +G+ V++P+ +
Sbjct: 126 SIGSTAPFIGLFGTVWGIMDALQSIGVTGSASLEAVAGPIGHALVATGVGIAVAVPAVLI 185
Query: 196 YNKFIEDSKKFAMQMEGFANEFSAILSR 223
YN F+ K M+ FA++F A+ R
Sbjct: 186 YNFFLRRLKLAVADMDDFAHDFDALAQR 213
>gi|330957254|gb|EGH57514.1| biopolymer transport protein ExbB [Pseudomonas syringae pv.
maculicola str. ES4326]
Length = 228
Score = 178 bits (452), Expect = 6e-43, Method: Composition-based stats.
Identities = 54/207 (26%), Positives = 100/207 (48%), Gaps = 6/207 (2%)
Query: 22 LAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHN 81
+ V ++ L +FS+LSW++++ KS ++ + Q ++F + FWS L T + +
Sbjct: 1 MIVPAVLWALIVFSVLSWALLLIKSAQYVRQKSQNKQFTKAFWSAPDLLTAAEHAAQYPG 60
Query: 82 IGLAAIFMSAMSEWK----KSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGS 137
LA I S + I DR++R + I +E + + L S
Sbjct: 61 -ALARIANSGFEAMAVDESPRTTQQLAHTINRSDRLERNLRQQIQKERRALESGQAILAS 119
Query: 138 MSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIPSSIAY 196
+ S +G+ G V G+M QSI S ++ ++ G I +L++ +G+ V++P+ + Y
Sbjct: 120 IGSTAPFIGLFGTVWGIMEALQSIGLTGSASLEAVAGPIGHALVATGVGIAVAVPAVLIY 179
Query: 197 NKFIEDSKKFAMQMEGFANEFSAILSR 223
N F+ K M+ FA++F A+ R
Sbjct: 180 NFFLRRLKLAVADMDDFAHDFDALAQR 206
>gi|330937170|gb|EGH41211.1| biopolymer transport protein ExbB [Pseudomonas syringae pv. pisi
str. 1704B]
Length = 235
Score = 178 bits (452), Expect = 6e-43, Method: Composition-based stats.
Identities = 54/208 (25%), Positives = 101/208 (48%), Gaps = 6/208 (2%)
Query: 21 GLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHH 80
+ V ++ L +FS+LSW++++ KS ++ + Q ++F ++FWS L T + +
Sbjct: 7 SMIVPAVLWALILFSVLSWALLLIKSAQYVRQKSQNKQFTKVFWSAPDLLTAAEHSAQYP 66
Query: 81 NIGLAAIFMSAMSEWK----KSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLG 136
LA I S + I DR++R + I +E + + L
Sbjct: 67 G-ALARIANSGFEAMAVDESPRTTQQLAHTINRSDRLERNLRQQIQKERRALESGQAILA 125
Query: 137 SMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIPSSIA 195
S+ S +G+ G V G+M QSI S ++ ++ G I +L++ +G+ V++P+ +
Sbjct: 126 SIGSTAPFIGLFGTVWGIMEALQSIGVTGSASLEAVAGPIGHALVATGVGIAVAVPAVLI 185
Query: 196 YNKFIEDSKKFAMQMEGFANEFSAILSR 223
YN F+ K M+ FA++F A+ R
Sbjct: 186 YNFFLRRLKLAVADMDDFAHDFDALAQR 213
>gi|302134731|ref|ZP_07260721.1| biopolymer transport protein ExbB [Pseudomonas syringae pv. tomato
NCPPB 1108]
Length = 228
Score = 178 bits (451), Expect = 6e-43, Method: Composition-based stats.
Identities = 54/207 (26%), Positives = 100/207 (48%), Gaps = 6/207 (2%)
Query: 22 LAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHN 81
+ V ++ L +FS+LSW++++ KS ++ + Q ++F + FWS L T + +
Sbjct: 1 MIVPAVLWALIVFSVLSWALLLIKSAQYVRQKSQNKQFTKAFWSAPDLLTAAEHSAQYPG 60
Query: 82 IGLAAIFMSAMSEWK----KSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGS 137
LA I S + I DR++R + I +E + + L S
Sbjct: 61 -ALARIANSGFEAMAVDESPRTTQQLAHTINRSDRLERNLRQQIQKERRALESGQAILAS 119
Query: 138 MSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIPSSIAY 196
+ S +G+ G V G+M QSI S ++ ++ G I +L++ +G+ V++P+ + Y
Sbjct: 120 IGSTAPFIGLFGTVWGIMEALQSIGVTGSASLEAVAGPIGHALVATGVGIAVAVPAVLIY 179
Query: 197 NKFIEDSKKFAMQMEGFANEFSAILSR 223
N F+ K M+ FA++F A+ R
Sbjct: 180 NFFLRRLKLAVADMDDFAHDFDALAQR 206
>gi|213971562|ref|ZP_03399672.1| biopolymer transport protein ExbB [Pseudomonas syringae pv. tomato
T1]
gi|237797879|ref|ZP_04586340.1| biopolymer transport protein ExbB [Pseudomonas syringae pv. oryzae
str. 1_6]
gi|237806025|ref|ZP_04592729.1| biopolymer transport protein ExbB [Pseudomonas syringae pv. oryzae
str. 1_6]
gi|301383609|ref|ZP_07232027.1| biopolymer transport protein ExbB [Pseudomonas syringae pv. tomato
Max13]
gi|302059434|ref|ZP_07250975.1| biopolymer transport protein ExbB [Pseudomonas syringae pv. tomato
K40]
gi|213923665|gb|EEB57250.1| biopolymer transport protein ExbB [Pseudomonas syringae pv. tomato
T1]
gi|331020729|gb|EGI00786.1| biopolymer transport protein ExbB [Pseudomonas syringae pv. oryzae
str. 1_6]
gi|331027135|gb|EGI07190.1| biopolymer transport protein ExbB [Pseudomonas syringae pv. oryzae
str. 1_6]
Length = 235
Score = 178 bits (451), Expect = 6e-43, Method: Composition-based stats.
Identities = 54/208 (25%), Positives = 100/208 (48%), Gaps = 6/208 (2%)
Query: 21 GLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHH 80
+ V ++ L +FS+LSW++++ KS ++ + Q ++F + FWS L T + +
Sbjct: 7 SMIVPAVLWALIVFSVLSWALLLIKSAQYVRQKSQNKQFTKAFWSAPDLLTAAEHSAQYP 66
Query: 81 NIGLAAIFMSAMSEWK----KSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLG 136
LA I S + I DR++R + I +E + + L
Sbjct: 67 G-ALARIANSGFEAMAVDESPRTTQQLAHTINRSDRLERNLRQQIQKERRALESGQAILA 125
Query: 137 SMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIPSSIA 195
S+ S +G+ G V G+M QSI S ++ ++ G I +L++ +G+ V++P+ +
Sbjct: 126 SIGSTAPFIGLFGTVWGIMEALQSIGVTGSASLEAVAGPIGHALVATGVGIAVAVPAVLI 185
Query: 196 YNKFIEDSKKFAMQMEGFANEFSAILSR 223
YN F+ K M+ FA++F A+ R
Sbjct: 186 YNFFLRRLKLAVADMDDFAHDFDALAQR 213
>gi|227821912|ref|YP_002825882.1| biopolymer transport ExbB protein [Sinorhizobium fredii NGR234]
gi|227340911|gb|ACP25129.1| biopolymer transport ExbB protein [Sinorhizobium fredii NGR234]
Length = 316
Score = 178 bits (451), Expect = 7e-43, Method: Composition-based stats.
Identities = 47/221 (21%), Positives = 103/221 (46%), Gaps = 5/221 (2%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
D+S +F+ + VK ++ L + S+ +W++ + K++ + + + ++ + +
Sbjct: 74 PHDLSPVGMFLAADMVVKSVMISLALASVATWAIFLVKTLELAFAKSRMKRALRVLAAAR 133
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPI-GIQDRIDRMMDVAIARELE 126
L V + + +A+ E +S +P+ GI++R+ ++ R +
Sbjct: 134 GLAEVEL---DRKAGAAGQMIAAAVDEVARSEAVLDHAPVAGIKERVASLLARIEVRAGK 190
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLG 185
++ L S+ S G VG+ G V G+M F I+ + N+ + PGI E+L++ +G
Sbjct: 191 RMSAGTGILASIGSVGPFVGLFGTVWGIMNSFIGISKAQTTNLAIVAPGIAEALLATAIG 250
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
L +IP+ + YN F + + + A ++SR +
Sbjct: 251 LVAAIPAVVIYNYFARSVGGYKLVLADAAAAVERLVSRDLD 291
>gi|115522985|ref|YP_779896.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris BisA53]
gi|115516932|gb|ABJ04916.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris BisA53]
Length = 264
Score = 178 bits (451), Expect = 7e-43, Method: Composition-based stats.
Identities = 49/224 (21%), Positives = 100/224 (44%), Gaps = 5/224 (2%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
+++ L ++S + +F+ + V+ ++ L + S+ +W+V + K++ Q R
Sbjct: 31 VDSASLLPRNLSPWGMFVNADIVVQAVMVGLALASLATWTVWLSKTLELRHATDQARRRL 90
Query: 61 QLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVA 120
+ F + +L + + + + +A + SA E S G ++RI ++
Sbjct: 91 EAFETETTLADLERDSGDATD-AVAQLIQSAAREASLS---GTNWDADFKERIALRLERV 146
Query: 121 IARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESL 179
A I L ++ + VG+ G V G+M F I+ + N+ V PGI E+L
Sbjct: 147 EAAMSRRIARGTGVLATIGAVAPFVGLFGTVWGIMNAFIGISQAQTTNLAVVAPGIAEAL 206
Query: 180 ISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
++ LGL +IP+ + YN + + + + +LSR
Sbjct: 207 LATALGLVAAIPAVVIYNHLTRVIAGYRALLGDASAQLLLLLSR 250
>gi|27379017|ref|NP_770546.1| biopolymer transport protein [Bradyrhizobium japonicum USDA 110]
gi|27352167|dbj|BAC49171.1| biopolymer transport protein [Bradyrhizobium japonicum USDA 110]
Length = 326
Score = 178 bits (451), Expect = 7e-43, Method: Composition-based stats.
Identities = 58/221 (26%), Positives = 103/221 (46%), Gaps = 4/221 (1%)
Query: 7 AIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG 66
A+ ++S + +FM + VK ++ L S+++W+V+I KS+ + R +
Sbjct: 97 AMKELSPWVMFMSADVIVKAVMIGLAFASLMTWTVLIAKSIELSVASGRLRSALKKISEA 156
Query: 67 QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
+SL +L I L + +A+ E + S G S GI++R + E
Sbjct: 157 RSLAEAQMALGTKEGI-LPSFLAAALREARMSA--GLSSDAGIKERAASSFSEIVRAEAR 213
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLG 185
I + L ++ S VG+ G V G+M F I+ + N+ V PGI E+L++ +G
Sbjct: 214 RIRIGMGVLATIGSTSPFVGLFGTVWGIMNSFIGISKSQTTNLAVVAPGIAEALLATAIG 273
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
L +IP+ I YN F +K + + + +LSR +
Sbjct: 274 LVAAIPAVIIYNHFSRVTKSYLELVSRASGAAGRLLSRDLD 314
>gi|209517545|ref|ZP_03266385.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. H160]
gi|209502078|gb|EEA02094.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. H160]
Length = 239
Score = 178 bits (451), Expect = 7e-43, Method: Composition-based stats.
Identities = 46/214 (21%), Positives = 83/214 (38%), Gaps = 8/214 (3%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
I + +L SI SW +I KS +RQ + FW +L
Sbjct: 7 IIHYLQTGDALTHGVAYVLLAMSIASWCFLIVKSWILTRAKRQAKRAVARFWQAPTLAEG 66
Query: 73 CKSLKNHHNIGLAAIFMSAMSEWKKSCD----KGARSPIGIQDRIDRMMDVAIARELEEI 128
L+ +F + + + + +R+ R + A+ +
Sbjct: 67 VAILRRTDR---ERVFAPLAEAALHAAEVDIPGALLARVERSERVLRALRQALNASQRRL 123
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLC 187
L S+ + VG+LG V G+ SIA + ++ G + E+LI GL
Sbjct: 124 EFGQVLLASVGATAPFVGLLGTVWGIYHALGSIAASGQAQIENVAGPVGEALIMTAFGLV 183
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
V+IP+ +AYN ++ + ++GFA++ A +
Sbjct: 184 VAIPAVLAYNVLGRLVRQLSEDLDGFAHDLHAYV 217
>gi|86151491|ref|ZP_01069706.1| TonB system transport protein ExbB [Campylobacter jejuni subsp.
jejuni 260.94]
gi|148926345|ref|ZP_01810029.1| biopolymer transport protein [Campylobacter jejuni subsp. jejuni
CG8486]
gi|315123780|ref|YP_004065784.1| TonB system transport protein ExbB [Campylobacter jejuni subsp.
jejuni ICDCCJ07001]
gi|85841838|gb|EAQ59085.1| TonB system transport protein ExbB [Campylobacter jejuni subsp.
jejuni 260.94]
gi|145844737|gb|EDK21842.1| biopolymer transport protein [Campylobacter jejuni subsp. jejuni
CG8486]
gi|315017502|gb|ADT65595.1| TonB system transport protein ExbB [Campylobacter jejuni subsp.
jejuni ICDCCJ07001]
Length = 253
Score = 178 bits (451), Expect = 7e-43, Method: Composition-based stats.
Identities = 52/216 (24%), Positives = 101/216 (46%), Gaps = 10/216 (4%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
+++S+ +L+ VK +I +L +FSIL+W+V I K + F +++ Q ++
Sbjct: 40 IELSLSSLYQNADEVVKGVIYILVLFSILAWAVFISKLMQFYFMKKNLDLSIQKIKELKN 99
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
L + ++ + L E + +K I++RI+ + I++++
Sbjct: 100 LNELDQTKDFAGVLSL---------EIQDELEKSEYKNDHIKERIELRLQNTISKQITAS 150
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
LS L S+ ++ +G+ G V G+M F IA + ++ V PGI E+L + GL
Sbjct: 151 KNGLSLLASIGASAPFIGLFGTVWGIMNAFIGIANLGNASLAVVAPGIAEALFATAFGLI 210
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
+IP+ + YN + K ++ AN + R
Sbjct: 211 AAIPAVLFYNYLTRKNLKLMHHLDELANFVYILFHR 246
>gi|83593490|ref|YP_427242.1| MotA/TolQ/ExbB proton channel [Rhodospirillum rubrum ATCC 11170]
gi|83576404|gb|ABC22955.1| MotA/TolQ/ExbB proton channel [Rhodospirillum rubrum ATCC 11170]
Length = 296
Score = 178 bits (451), Expect = 7e-43, Method: Composition-based stats.
Identities = 65/224 (29%), Positives = 102/224 (45%), Gaps = 9/224 (4%)
Query: 3 NYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQL 62
A+ D S LF+Q VK ++ LL + SI W+VI+ K+V + RR+ R FE+
Sbjct: 72 PVAPALHDFSALGLFLQADPVVKGVMGLLVVASIAVWAVILDKAVRLVIARREARAFERA 131
Query: 63 FWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIA 122
+ L V + SA W+ ARS +D I+R M + +
Sbjct: 132 V-AANDLSAVM-----LKGGMATTVVRSAHEAWQDYQPGEARSVR--RDGIERAMRLTVN 183
Query: 123 RELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLIS 181
EL ++ L L S+ SA VG+ G V G+M F SIA ++ V PGI E+L +
Sbjct: 184 AELRKLEVGLPLLASVGSAAPFVGLFGTVWGIMHSFTSIAQSNDTSLAVVAPGIAEALFA 243
Query: 182 ILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+GL +IP+ +A+N + + + + L+R
Sbjct: 244 TAIGLVAAIPAVLAFNALSVGLGRIGQRFQASMIPLAGRLARDV 287
>gi|28867502|ref|NP_790121.1| biopolymer transport protein ExbB [Pseudomonas syringae pv. tomato
str. DC3000]
gi|28850736|gb|AAO53816.1| biopolymer transport protein ExbB, putative [Pseudomonas syringae
pv. tomato str. DC3000]
Length = 235
Score = 178 bits (451), Expect = 8e-43, Method: Composition-based stats.
Identities = 54/208 (25%), Positives = 100/208 (48%), Gaps = 6/208 (2%)
Query: 21 GLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHH 80
+ V ++ L +FS+LSW++++ KS ++ + Q ++F + FWS L T + +
Sbjct: 7 SMIVPAVLWALIVFSVLSWALLLIKSAQYVRQKSQNKQFTKAFWSAPDLLTAAEHSAQYP 66
Query: 81 NIGLAAIFMSAMSEWK----KSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLG 136
LA I S + I DR++R + I +E + + L
Sbjct: 67 G-ALARIANSGFEAMAVDESPRTTQQLAHTINRSDRLERNLRQQIQKERRALESGQAILA 125
Query: 137 SMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIPSSIA 195
S+ S +G+ G V G+M QSI S ++ ++ G I +L++ +G+ V++P+ +
Sbjct: 126 SIGSTAPFIGLFGTVWGIMEALQSIGLTGSASLEAVAGPIGHALVATGVGIAVAVPAVLI 185
Query: 196 YNKFIEDSKKFAMQMEGFANEFSAILSR 223
YN F+ K M+ FA++F A+ R
Sbjct: 186 YNFFLRRLKLAVADMDDFAHDFDALAQR 213
>gi|152981708|ref|YP_001351935.1| biopolymer transport protein ExbB [Janthinobacterium sp. Marseille]
gi|151281785|gb|ABR90195.1| biopolymer transport protein ExbB [Janthinobacterium sp. Marseille]
Length = 279
Score = 178 bits (451), Expect = 8e-43, Method: Composition-based stats.
Identities = 47/221 (21%), Positives = 98/221 (44%), Gaps = 12/221 (5%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YG++ AL+ K + +L +FSI SW +I+ K + L +Q R+ E+
Sbjct: 61 NPYGIS-------ALWNGSDFVAKGTLLILLLFSIGSWYIIVAKLLAQRKLHKQARDTER 113
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
FW ++ +L++ +E G + + + + + ++
Sbjct: 114 TFWDAGTVRQGLDTLESGTPFHFIGTLALKATEHH----SGLLAHVDFNTWVVQSLHSSV 169
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLI 180
+ + L+FL ++ S VG+ G V G+ +I ++ + G + E+LI
Sbjct: 170 DTVKNRLQDGLAFLATVGSTAPFVGLFGTVWGIYHALTAIGLSGQASIDKVAGPVGEALI 229
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+GL V++P+ + YN + +K +++ F++ A+L
Sbjct: 230 MTAIGLAVAVPAVLGYNLLVRRNKAALEKVQDFSSTLHAVL 270
>gi|17546683|ref|NP_520085.1| biopolymer transport transmembrane protein [Ralstonia solanacearum
GMI1000]
gi|17428982|emb|CAD15666.1| probable biopolymer transport transmembrane protein [Ralstonia
solanacearum GMI1000]
Length = 243
Score = 178 bits (451), Expect = 8e-43, Method: Composition-based stats.
Identities = 49/217 (22%), Positives = 94/217 (43%), Gaps = 3/217 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
+ ++ + L+ Q + + LL + S+ SW VI+ K+ + I L+ + E+ FW
Sbjct: 1 MQELGLSHLWTQGDIVARGTALLLLLMSLASWIVILTKAWDLIRLKSMAQGAEKRFWHSD 60
Query: 68 SLETVCKSLKNHHNIGLAAIFMSA--MSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
+ +L + + A+ + ++ ++ + I D I R + AI +
Sbjct: 61 DFDHAMHTLGSPKDNPFYALAQTGREAAQHHRASHPQLHDVMDISDWITRSLKSAIDESV 120
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILL 184
++ L+ L S+ S VG+ G V G+ I + + G + ESLI
Sbjct: 121 GQMQSGLAVLASVGSTAPFVGLFGTVWGIYHALIGIGAVGVPTIDKVAGPVGESLIMTAF 180
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
GL V+IP+ + YN +K ++ FA++ A
Sbjct: 181 GLAVAIPAVLGYNALTRGNKSVIAKLNRFAHDLHAYF 217
>gi|56476435|ref|YP_158024.1| MotA/TolQ/ExbB proton channel family protein [Aromatoleum
aromaticum EbN1]
gi|56312478|emb|CAI07123.1| MotA/TolQ/ExbB proton channel family protein [Aromatoleum
aromaticum EbN1]
Length = 259
Score = 178 bits (451), Expect = 8e-43, Method: Composition-based stats.
Identities = 48/215 (22%), Positives = 91/215 (42%), Gaps = 7/215 (3%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+ L+ Q L +K + L + S+ SW +I+ ++V RR F + FW+ L+
Sbjct: 6 FGLAHLWGQSDLIIKLVAFTLVVMSVASWYLILVRTVRQFRARR-FDSAVEAFWNAPHLD 64
Query: 71 TVCKSL-KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQ----DRIDRMMDVAIAREL 125
L + A+ + + +G + + + R M +IA
Sbjct: 65 EGLARLSGAAPDSPFEALARQGAAAAEHLRRHTHGETLGGKLDADEFVTRAMRKSIALST 124
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILL 184
++ L+ L S+ S VG+ G V G+ I+ + + G + E+LI
Sbjct: 125 AQLESGLTVLASIGSTAPFVGLFGTVWGIYHALIGISTSGMATLDKVAGPVGEALIMTAF 184
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
GL V+IP+ +A+N F ++ ++ FA++ A
Sbjct: 185 GLFVAIPAVLAFNTFTRANRLELSLLDAFAHDLHA 219
>gi|188580872|ref|YP_001924317.1| MotA/TolQ/ExbB proton channel [Methylobacterium populi BJ001]
gi|179344370|gb|ACB79782.1| MotA/TolQ/ExbB proton channel [Methylobacterium populi BJ001]
Length = 233
Score = 177 bits (450), Expect = 8e-43, Method: Composition-based stats.
Identities = 61/219 (27%), Positives = 104/219 (47%), Gaps = 10/219 (4%)
Query: 7 AIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG 66
A D+S LF+Q VK ++ LL + S+ W+V+ +K V +RQ + F+ + S
Sbjct: 13 AAHDMSFIGLFLQADPIVKSVMILLVVASLACWTVVFEKIVRLSAAKRQAKAFDAMVRSE 72
Query: 67 QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
+++T K + H + + + W+ + S ++RI+R M A+ E++
Sbjct: 73 GTIDTGQKGIAGH-------VVKAGLDAWRD--QDPSESRAERRERIERAMKGALGLEVK 123
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLG 185
+ L L + S VG+ G V G+M F SIA ++ V PGI E+L + +G
Sbjct: 124 RLLGGLPLLATSGSTAPFVGLFGTVWGIMNSFSSIAKSQDTSLAVVAPGIAEALFATAIG 183
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
L V+IP+ +AYNK D + + L+R
Sbjct: 184 LVVAIPAVMAYNKLSGDVARIQSSFVSCISVLGNRLARD 222
>gi|46200994|ref|ZP_00207926.1| COG0811: Biopolymer transport proteins [Magnetospirillum
magnetotacticum MS-1]
Length = 266
Score = 177 bits (450), Expect = 8e-43, Method: Composition-based stats.
Identities = 51/221 (23%), Positives = 93/221 (42%), Gaps = 11/221 (4%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YGL AL+ Q K + +L + S+ SW +++ K V + R +E
Sbjct: 42 NPYGLE-------ALWAQGDFVSKGTLLILALMSMASWYILVIKLVEQSRMLRHAKEAGA 94
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
FW S+ ++L + + S M + D I + I + A+
Sbjct: 95 GFWKAASISDGARALA--EDSPFRFVASSGMDA-ARHHDGSLTEKIDLNTWITMSIQRAV 151
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLI 180
+ ++ L+ L ++ S VG+ G V G+ +I + + G + E+LI
Sbjct: 152 GDIVSDLQGGLAVLATVGSTAPFVGLFGTVWGIYHALTAIGIAGQAAIDKVAGPVGEALI 211
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
GL V++P+ + YN + +K A ++ FA + A+L
Sbjct: 212 MTAFGLAVAVPAVLGYNLLVRRNKLVAEKVRSFAADLHAVL 252
>gi|302189185|ref|ZP_07265858.1| biopolymer transport protein ExbB [Pseudomonas syringae pv.
syringae 642]
Length = 235
Score = 177 bits (450), Expect = 9e-43, Method: Composition-based stats.
Identities = 53/208 (25%), Positives = 99/208 (47%), Gaps = 6/208 (2%)
Query: 21 GLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHH 80
+ V ++ L + S+LSW++++ KS ++ + Q ++F + FWS L T + +
Sbjct: 7 SMIVPAVLWALILLSVLSWALLLIKSAQYVRQKSQNKQFTKAFWSAPDLLTAAEHSAQYP 66
Query: 81 NIGLAAIFMSAMSEWK----KSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLG 136
LA I S + I DR++R + I +E + + L
Sbjct: 67 G-ALARIANSGFEAMAVDESPRTTQQLAHTINRSDRLERNLRQQIQKERRALESGQAILA 125
Query: 137 SMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIPSSIA 195
S+ S +G+ G V G+M QSI S ++ ++ G I +L++ +G+ V++P+ +
Sbjct: 126 SIGSTAPFIGLFGTVWGIMEALQSIGVTGSASLEAVAGPIGHALVATGVGIAVAVPAVLI 185
Query: 196 YNKFIEDSKKFAMQMEGFANEFSAILSR 223
YN F+ K M+ FA++F A+ R
Sbjct: 186 YNFFLRRLKLAVADMDDFAHDFDALAQR 213
>gi|300703736|ref|YP_003745338.1| biopolymer transport protein [Ralstonia solanacearum CFBP2957]
gi|299071399|emb|CBJ42718.1| Biopolymer transport protein [Ralstonia solanacearum CFBP2957]
Length = 243
Score = 177 bits (450), Expect = 9e-43, Method: Composition-based stats.
Identities = 49/217 (22%), Positives = 95/217 (43%), Gaps = 3/217 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
+ ++ + L+ Q + + LL + S+ SW VI+ K+ + I L+ + E+ FW
Sbjct: 1 MQELGLSHLWTQGDIVARGTALLLLLMSLASWIVILTKAWDLIRLKSMAQGAEKRFWHSD 60
Query: 68 SLETVCKSLKNHHNIGLAAIFMSA--MSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
+ ++L + + A+ + ++ ++ + I D I R + AI +
Sbjct: 61 DFDHAMQTLGSPKDNPFYALAQTGREAAQHHRASHPQLHDVMDISDWITRSLKSAIDESV 120
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILL 184
++ L+ L S+ S VG+ G V G+ I + + G + ESLI
Sbjct: 121 GQMQSGLAVLASVGSTAPFVGLFGTVWGIYHALIGIGAVGVPTIDKVAGPVGESLIMTAF 180
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
GL V+IP+ + YN +K ++ FA++ A
Sbjct: 181 GLAVAIPAVLGYNALTRGNKSVIAKLNRFAHDLHAYF 217
>gi|326317083|ref|YP_004234755.1| MotA/TolQ/ExbB proton channel [Acidovorax avenae subsp. avenae ATCC
19860]
gi|323373919|gb|ADX46188.1| MotA/TolQ/ExbB proton channel [Acidovorax avenae subsp. avenae ATCC
19860]
Length = 297
Score = 177 bits (450), Expect = 9e-43, Method: Composition-based stats.
Identities = 47/221 (21%), Positives = 88/221 (39%), Gaps = 11/221 (4%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YG A++ + K + +L I S SW VII K + + Q R +
Sbjct: 76 NPYG-------FKAMWEHGDMVSKGTLFILLIMSATSWYVIITKLLEQRRVHGQARLVQA 128
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
FW+ L T ++L + + A +K + + + + + AI
Sbjct: 129 DFWNRGDLRTSTQAL---PDSSVFRYVAEAGLIAQKQYEGPLTQQVDRNSWLSQSVMQAI 185
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLI 180
+ + L+ L ++ S VG+ G V G+ +I ++ + G + E+LI
Sbjct: 186 DAVGDRLQGGLAVLATVGSTAPFVGLFGTVWGIYHALTAIGLAGQASIDKVAGPVGEALI 245
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+GL ++P+ + YN + +K ++ F E L
Sbjct: 246 MTAIGLAAAVPAVLGYNWLVRRNKAALDEVRDFGTELHTSL 286
>gi|170739437|ref|YP_001768092.1| tonB-system energizer ExbB [Methylobacterium sp. 4-46]
gi|168193711|gb|ACA15658.1| tonB-system energizer ExbB [Methylobacterium sp. 4-46]
Length = 348
Score = 177 bits (450), Expect = 9e-43, Method: Composition-based stats.
Identities = 53/222 (23%), Positives = 101/222 (45%), Gaps = 6/222 (2%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
I D+S +A+F+ + VK +++ L + S+++W+++ K+V RR
Sbjct: 118 IHDLSPWAMFLNADILVKIVMSGLALASVVTWTILAAKTVELGLARRGLGRALGRVAGAG 177
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
SL + L + L + + + E + S G GI++R + E
Sbjct: 178 SLAEAERELGGRDTV-LDRLVAAILDEVRISRGLG----EGIKERAASRCAEIVKAEGRT 232
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
+ L ++ + VG+ G V G+M F IA + N+ V PGI E+L++ +GL
Sbjct: 233 ARRGMGALATIGAISPFVGLFGTVWGIMNSFIGIARAQTTNLAVVAPGIAEALLATAIGL 292
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
+IP+ I YN F ++ + ++ + +LSR + +
Sbjct: 293 AAAIPAVIVYNHFARATRGYGELVQRASGAAQRLLSRDLDRD 334
>gi|299770162|ref|YP_003732188.1| putative biopolymer transport protein (ExbB-like) [Acinetobacter
sp. DR1]
gi|298700250|gb|ADI90815.1| putative biopolymer transport protein (ExbB-like) [Acinetobacter
sp. DR1]
Length = 244
Score = 177 bits (450), Expect = 9e-43, Method: Composition-based stats.
Identities = 46/201 (22%), Positives = 96/201 (47%), Gaps = 3/201 (1%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCK--SLKNHHNIG 83
I LL FSI++W +I+ K V +Q + F + FW ++L L
Sbjct: 11 GTIWLLVAFSIVTWVLIVVKVVQTQRATKQSKLFVEEFWKAKNLSDAVTKSELGEGPAAR 70
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
+A + E + + ++ QD ++R + + E ++ + + L S+ +
Sbjct: 71 VANTGFQTLIEADEKTHQDLQNSWSRQDLLERHLSKQVLTERRQLEKGSALLASIGNNAP 130
Query: 144 LVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIPSSIAYNKFIED 202
+G+ G V G++ Q+IA + ++ + G I E+L++ +G+ V++P+ +AYN F+
Sbjct: 131 FIGLFGTVFGIIHALQAIAHSGNASMDVVAGPIGEALVATGIGIAVAVPAVLAYNYFVRK 190
Query: 203 SKKFAMQMEGFANEFSAILSR 223
K ++ FA +F ++ +
Sbjct: 191 VKTIGADLDDFATDFVSLNQK 211
>gi|222872011|gb|EEF09142.1| predicted protein [Populus trichocarpa]
Length = 217
Score = 177 bits (450), Expect = 1e-42, Method: Composition-based stats.
Identities = 43/191 (22%), Positives = 81/191 (42%), Gaps = 3/191 (1%)
Query: 34 FSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSA-- 91
S+LSW VI+ K+ + I L++ E+ FW + +L + + ++
Sbjct: 1 MSLLSWIVILTKAWDLIRLKKMAHGAEKRFWHSDDFDHALDTLGANDANPFRMLAVTGRE 60
Query: 92 MSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAV 151
++ ++ + I D + R + AI + + L+ L S+ S VG+ G V
Sbjct: 61 AAQHHRASQPQLHDALDISDWLTRSLKSAIDEAVARMQSGLAILASVGSTAPFVGLFGTV 120
Query: 152 LGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQM 210
G+ I + + G + E+LI GL V+IP+ + YN +K ++
Sbjct: 121 WGIYHALIGIGASGVPTIDKVAGPVGEALIMTAFGLAVAIPAVLGYNALSRGNKGVISKL 180
Query: 211 EGFANEFSAIL 221
FA++ A
Sbjct: 181 NRFAHDLHAYF 191
>gi|237748490|ref|ZP_04578970.1| MotA/TolQ/ExbB proton channel [Oxalobacter formigenes OXCC13]
gi|229379852|gb|EEO29943.1| MotA/TolQ/ExbB proton channel [Oxalobacter formigenes OXCC13]
Length = 234
Score = 177 bits (450), Expect = 1e-42, Method: Composition-based stats.
Identities = 56/224 (25%), Positives = 99/224 (44%), Gaps = 12/224 (5%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YG I AL+ Q G +K + LL + S+ SW++I ++ L +E
Sbjct: 4 NPYG-------IMALWNQGGWIIKFVALLLLVMSVASWTIIALRAWRAWKLYGLSKEI-A 55
Query: 62 LFWSGQSLETVCKSLKN-HHNIGLAAIFMSAMSE--WKKSCDKGARSPIGIQDRIDRMMD 118
FW + +SLK + A+ + ++ ++ +S IG+ + + +
Sbjct: 56 AFWKAPTFAKGLESLKTVPDDNPFHALAAEGLQAASLHQAGEQNLQSKIGLPEWLTESLR 115
Query: 119 VAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIE 177
+I ++ LS L S+ + +G+ G V G+ SI ++ I G + E
Sbjct: 116 GSIDDSTAKMQSGLSILASIGATAPFIGLFGTVWGIYHALVSIGISGQASIDKIAGPVGE 175
Query: 178 SLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
SLI LGL V+IP+ + YN I +++ Q+ FA + A
Sbjct: 176 SLIMTALGLAVAIPAVLGYNALIRINRRLVGQLNRFARQLYAYF 219
>gi|167036213|ref|YP_001671444.1| MotA/TolQ/ExbB proton channel [Pseudomonas putida GB-1]
gi|166862701|gb|ABZ01109.1| MotA/TolQ/ExbB proton channel [Pseudomonas putida GB-1]
Length = 239
Score = 177 bits (450), Expect = 1e-42, Method: Composition-based stats.
Identities = 51/201 (25%), Positives = 101/201 (50%), Gaps = 4/201 (1%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLA 85
+I LL FS+++W + + K F+ L+ Q + F Q FW+ SL++ + L + A
Sbjct: 14 AVIWLLVGFSVVTWGLALVKVAQFVRLKNQDKRFHQQFWAASSLDSAAE-LSHELPGPAA 72
Query: 86 AIFMSAMSEWK--KSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
+ S + + I QDR++R + I RE + L+ + S+ S
Sbjct: 73 RVAQSGYAAIAVGDTQANDLSHAINHQDRLERALRQQIVRERRSLETGLAVVASIGSTSP 132
Query: 144 LVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIPSSIAYNKFIED 202
+G+ G V G+M + I+ S ++ ++ G I +L++ +G+ V++P+ + YN F+
Sbjct: 133 FIGLFGTVWGIMEALKGISAAGSASLETVAGPIGAALVATGVGIAVAVPAVLVYNYFLRR 192
Query: 203 SKKFAMQMEGFANEFSAILSR 223
K A ++ FA++F ++ +
Sbjct: 193 LKLTAADLDDFAHDFYSLAQK 213
>gi|170719483|ref|YP_001747171.1| MotA/TolQ/ExbB proton channel [Pseudomonas putida W619]
gi|169757486|gb|ACA70802.1| MotA/TolQ/ExbB proton channel [Pseudomonas putida W619]
Length = 239
Score = 177 bits (449), Expect = 1e-42, Method: Composition-based stats.
Identities = 50/201 (24%), Positives = 102/201 (50%), Gaps = 4/201 (1%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLA 85
+I LL FS+++W + + K V F+ L+ Q + F FW+ SL+ + + + A
Sbjct: 14 AVIWLLVGFSVVTWGLALAKIVQFVRLKNQDKRFHTQFWAASSLDAAAQ-VSHELPGPAA 72
Query: 86 AIFMSAMSEWK--KSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
+ S + ++ I QDR++R + I RE + L+ + S+ S
Sbjct: 73 RVAQSGYAAIAVGEAQTNDLSHAINHQDRLERALHQQIVRERRSLETGLAVVASIGSTSP 132
Query: 144 LVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIPSSIAYNKFIED 202
+G+ G V G+M + I+ S ++ ++ G I +L++ +G+ V++P+ + YN F+
Sbjct: 133 FIGLFGTVWGIMEALKGISAAGSASLETVAGPIGAALVATGVGIAVAVPAVLVYNYFLRR 192
Query: 203 SKKFAMQMEGFANEFSAILSR 223
K A +++ FA++F ++ +
Sbjct: 193 LKLTAAELDDFAHDFYSLAQK 213
>gi|254523737|ref|ZP_05135792.1| tonB-system energizer ExbB [Stenotrophomonas sp. SKA14]
gi|219721328|gb|EED39853.1| tonB-system energizer ExbB [Stenotrophomonas sp. SKA14]
Length = 234
Score = 177 bits (449), Expect = 1e-42, Method: Composition-based stats.
Identities = 53/222 (23%), Positives = 96/222 (43%), Gaps = 4/222 (1%)
Query: 6 LAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS 65
+A ++ + +++ + VK ++ L + S+ +W+V++ K RQ R L
Sbjct: 1 MAAPALTPWGMYLAADVVVKGVMIALALASLATWTVLLAKGWELARQARQLRAARALLLQ 60
Query: 66 GQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
SL LA + +A +E + S D +R GI++R+ +D
Sbjct: 61 APSLPAESAEASAQQGTALA-MLEAARTELRLSQDLDSRD--GIKERVASRLDRIELETA 117
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILL 184
+ L S+ + VG+ G V G+M F IA + N+ V PGI E+L++ L
Sbjct: 118 RLQRRGIGVLASIGAVAPFVGLFGTVWGIMNSFIGIAHSNTTNLAVVAPGIAEALLATAL 177
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
GL +IP+ + YN F + + ++SR +
Sbjct: 178 GLVAAIPAVLVYNHFSRVLASLRGLLGDLSAAVQQLVSRDLD 219
>gi|46580793|ref|YP_011601.1| tolQ protein [Desulfovibrio vulgaris str. Hildenborough]
gi|46450213|gb|AAS96861.1| tolQ protein [Desulfovibrio vulgaris str. Hildenborough]
gi|311234500|gb|ADP87354.1| MotA/TolQ/ExbB proton channel [Desulfovibrio vulgaris RCH1]
Length = 317
Score = 177 bits (449), Expect = 1e-42, Method: Composition-based stats.
Identities = 46/205 (22%), Positives = 98/205 (47%), Gaps = 2/205 (0%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+ I L+ + ++ +L + S++SWS+I++K++ F ++ + + +
Sbjct: 1 MEIIELYSHATPVARAVMAVLVVMSVVSWSIIVRKALLFRSIEGRLDGAIHRLEACDGIA 60
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
K H + + + + E+ + + A + + I D + R M A+A E +
Sbjct: 61 EAMSRFKGHADNTVWHLLRTGYREYMRLLPRRAPAEV-IADNVRRAMRHAVAEETGRLGS 119
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV-SIPGIIESLISILLGLCVS 189
+L L + ++ +G+ G V G+M F +AG + + PGI E+LI+ +GL V+
Sbjct: 120 QLPLLATTANTAPFIGLFGTVWGIMDAFHKLAGAKTAAIASVAPGISEALIATAVGLGVA 179
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFA 214
IP++I YN + ++ ++ A
Sbjct: 180 IPAAIGYNLHMTRVRRVQARLISLA 204
>gi|331009381|gb|EGH89437.1| TonB system transport protein ExbB1 [Pseudomonas syringae pv.
tabaci ATCC 11528]
Length = 219
Score = 177 bits (449), Expect = 1e-42, Method: Composition-based stats.
Identities = 49/203 (24%), Positives = 91/203 (44%), Gaps = 4/203 (1%)
Query: 25 KCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGL 84
K ++ L I SI++W++ I K + +R+ R +SL + +
Sbjct: 1 KAVMIGLAIASIITWTIWISKGFELLGAKRRLRGEIVNLKKARSLNEASSTASKEGTLA- 59
Query: 85 AAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLL 144
+ A+ E + S +R GI++R+ ++ +A ++ L ++ S
Sbjct: 60 HLLVHDALEEMRLSA--NSREREGIKERVSFRLERLVAACGRNMSMGTGVLATIGSTAPF 117
Query: 145 VGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDS 203
VG+ G V G+M F IA + N+ V PGI E+L++ LGL +IP+ + YN F
Sbjct: 118 VGLFGTVWGIMNSFIGIAKTQTTNLAVVAPGIAEALLATALGLVAAIPAVVIYNVFARSI 177
Query: 204 KKFAMQMEGFANEFSAILSRQTE 226
+ Q+ + ++SR +
Sbjct: 178 AGYKAQVSDASAHVLLLVSRDLD 200
>gi|83748337|ref|ZP_00945361.1| TolQ protein [Ralstonia solanacearum UW551]
gi|207723931|ref|YP_002254329.1| biopolymer transport protein [Ralstonia solanacearum MolK2]
gi|207742832|ref|YP_002259224.1| biopolymer transport protein [Ralstonia solanacearum IPO1609]
gi|83724959|gb|EAP72113.1| TolQ protein [Ralstonia solanacearum UW551]
gi|206589138|emb|CAQ36100.1| biopolymer transport protein [Ralstonia solanacearum MolK2]
gi|206594226|emb|CAQ61153.1| biopolymer transport protein [Ralstonia solanacearum IPO1609]
Length = 243
Score = 177 bits (449), Expect = 1e-42, Method: Composition-based stats.
Identities = 49/217 (22%), Positives = 94/217 (43%), Gaps = 3/217 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
+ ++ + L+ Q + + LL + S+ SW VI+ K + I L+ + E+ FW
Sbjct: 1 MQELGLSHLWTQGDIVARGTALLLLLMSLASWIVILTKVWDLIRLKSMAQGAEKRFWHSD 60
Query: 68 SLETVCKSLKNHHNIGLAAIFMSA--MSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
+ ++L + + A+ + ++ ++ + I D I R + AI +
Sbjct: 61 DFDHAMQTLGSPKDNPFYALAQTGREAAQHHRASHPQLHDVMDISDWITRSLKSAIDESV 120
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILL 184
++ L+ L S+ S VG+ G V G+ I + + G + ESLI
Sbjct: 121 GQMQSGLAVLASVGSTAPFVGLFGTVWGIYHALIGIGAVGVPTIDKVAGPVGESLIMTAF 180
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
GL V+IP+ + YN +K ++ FA++ A
Sbjct: 181 GLAVAIPAVLGYNALTRGNKSVIAKLNRFAHDLHAYF 217
>gi|187478612|ref|YP_786636.1| biopolymer transport protein [Bordetella avium 197N]
gi|115423198|emb|CAJ49729.1| biopolymer transport protein [Bordetella avium 197N]
Length = 304
Score = 177 bits (449), Expect = 1e-42, Method: Composition-based stats.
Identities = 53/217 (24%), Positives = 98/217 (45%), Gaps = 5/217 (2%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+ Q K + +L + S+++W +I+ K+++ +++R++ F FW+ SL+
Sbjct: 60 MGFMHFVAQSDFVGKALFVILILMSLVTWYLIVVKTLSNLSMRKRAANFLNHFWNASSLK 119
Query: 71 TVCKSL----KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
V + LA + A S K + + R M I E
Sbjct: 120 QVENEIVTHGARDPFSHLAIHAIHAQSHHAKFGATKLEEAGSNGEFVTRTMRKVIDEETA 179
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLG 185
++ L+ L S+ S VG+ G V G+ I + I G + E+LI LG
Sbjct: 180 KLENGLTVLASVGSTAPFVGLFGTVWGVYHALVGIGLSDGVTINRIAGPVGEALIMTGLG 239
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
L V+IP+ +AYN F+ +++ F +++ FA++ A L+
Sbjct: 240 LAVAIPAVLAYNAFVRNNRVFLSRLDAFAHDLFAFLT 276
>gi|209967073|ref|YP_002299988.1| biopolymer transport ExbB protein [Rhodospirillum centenum SW]
gi|209960539|gb|ACJ01176.1| biopolymer transport ExbB protein [Rhodospirillum centenum SW]
Length = 278
Score = 177 bits (449), Expect = 1e-42, Method: Composition-based stats.
Identities = 55/216 (25%), Positives = 96/216 (44%), Gaps = 3/216 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
++ + +FMQ VK ++ L + S+ +W+V+I KSV R R S QSL
Sbjct: 50 LTPWGMFMQADWVVKTVMIGLLLASVATWTVLIAKSVELRRARAVQRAGFASVDSAQSLA 109
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
++ + + LA + +A E + S D + G+++R+ + A I
Sbjct: 110 QAIQA-GSREDGVLAEMTAAASLELRLSADA-LQDVDGVKERVALRLQRIEATAGRRIAV 167
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVS 189
L ++ + +G+ G V G+M F IA + N+ V PGI E+L++ GL +
Sbjct: 168 GTGLLATIGATSPFIGLFGTVWGIMNAFIGIADSKATNLAVVAPGIAEALLATAFGLIAA 227
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
IP+ + YN F + + I+SR
Sbjct: 228 IPAVVIYNHFTRQIAAYRGLVADTGAAVMRIVSRDL 263
>gi|241760806|ref|ZP_04758897.1| transporter, MotA/TolQ/ExbB proton channel family [Neisseria
flavescens SK114]
gi|261379269|ref|ZP_05983842.1| TonB system transport protein ExbB [Neisseria subflava NJ9703]
gi|241318703|gb|EER55255.1| transporter, MotA/TolQ/ExbB proton channel family [Neisseria
flavescens SK114]
gi|284797701|gb|EFC53048.1| TonB system transport protein ExbB [Neisseria subflava NJ9703]
Length = 219
Score = 176 bits (448), Expect = 1e-42, Method: Composition-based stats.
Identities = 44/221 (19%), Positives = 106/221 (47%), Gaps = 5/221 (2%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
MD+S+ +F + + + L+ + S+++WSVI+ + + + ++ + ++L + +
Sbjct: 1 MDLSL--VFKSGDVVLIGVFVLMLLMSVVTWSVIVIRCIKYRKAKKGNAQVKELMLNAFT 58
Query: 69 LETVCKSLKN--HHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
L + K +A + A ++++ K + + + + + ++ + +
Sbjct: 59 LADAVQKAKAVEAPMSRVADESLRAYQNYRQTTSKSLIDELPLNEYLVVHIRNSLTQTMR 118
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLG 185
+ ++ L S+ + +G+LG V G+ I+ ++ ++ G I E+L+S +G
Sbjct: 119 QFDYGMTALASIGATAPFIGLLGTVWGIYHALIGISESGQMSIAAVAGPIGEALVSTAVG 178
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
L V+IP+ +AYN +K A M+ FA++ L Q +
Sbjct: 179 LFVAIPAVLAYNFLNRGTKTIAQDMDAFAHDLHVRLLNQKD 219
>gi|85058259|ref|YP_453961.1| biopolymer transport protein ExbB [Sodalis glossinidius str.
'morsitans']
gi|84778779|dbj|BAE73556.1| biopolymer transport protein [Sodalis glossinidius str.
'morsitans']
Length = 253
Score = 176 bits (448), Expect = 1e-42, Method: Composition-based stats.
Identities = 50/206 (24%), Positives = 98/206 (47%), Gaps = 6/206 (2%)
Query: 6 LAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS 65
L MD+S++ ++ + VK ++ L + S+++W++ K + ++R+ R L
Sbjct: 14 LMQMDLSVWGMYQHADVVVKIVMIGLLLASVVTWALFFGKGAELLAVKRRLRRELLLLKD 73
Query: 66 GQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGAR--SPIGIQDRIDRMMDVAIAR 123
+SL+ N L+ +S ++E D AR GI++R+ ++ +A
Sbjct: 74 VRSLDQATTVAANFSPRSLS---VSLLAETANELDLSARLSDNNGIKERVAFRLERRVAG 130
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISI 182
+ + FL ++ + +G+ G V G+M F IA + N+ V PGI E+L++
Sbjct: 131 VSRAMGKGNGFLATIGAISPFIGLFGTVWGIMNSFIGIAHTQTTNLAVVAPGIAEALLAT 190
Query: 183 LLGLCVSIPSSIAYNKFIEDSKKFAM 208
+GL +IP+ + YN F +
Sbjct: 191 AIGLFAAIPAVVIYNVFARTIAGYKA 216
>gi|58039740|ref|YP_191704.1| biopolymer transport ExbB protein [Gluconobacter oxydans 621H]
gi|58002154|gb|AAW61048.1| Biopolymer transport ExbB protein [Gluconobacter oxydans 621H]
Length = 366
Score = 176 bits (448), Expect = 2e-42, Method: Composition-based stats.
Identities = 47/221 (21%), Positives = 92/221 (41%), Gaps = 11/221 (4%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YGL AL+ + ++ ++ I S +W +++ K + L +E +
Sbjct: 129 NPYGLG-------ALWANGDAIARGVLIIMVIMSAGTWIIMVMKFLEQGRLFAASKEAAR 181
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
FW+ S+ +LK A +E + R I + + + A+
Sbjct: 182 EFWTKPSVHDGAAALKPSSPFRYIAETGIVAAEH---HEGSMRDSIDLPSWTEMSISRAV 238
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLI 180
+ L+FLG++ S VG+ G V G+ +I ++ + G + ESLI
Sbjct: 239 DTINTRMQGGLAFLGTVGSTSPFVGLFGTVWGIYHALTAIGISGQASIDKVAGPVGESLI 298
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+GL ++P+ + YN + +K ++ FA + ++L
Sbjct: 299 MTAIGLATAVPAVLGYNLLVRRNKGAMDRVRNFAADIQSVL 339
>gi|91781063|ref|YP_556270.1| MotA/TolQ/ExbB proton channel [Burkholderia xenovorans LB400]
gi|91693723|gb|ABE36920.1| outer membrane transport energization protein ExbB [Burkholderia
xenovorans LB400]
Length = 250
Score = 176 bits (448), Expect = 2e-42, Method: Composition-based stats.
Identities = 44/221 (19%), Positives = 91/221 (41%), Gaps = 10/221 (4%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
M +YG++ +++ + I+ +L S+LSW+V+ K +R+Q E
Sbjct: 1 MQHYGIS-------NVWLSGDGVTRAILIVLATMSVLSWAVVFAKGATLTRVRQQSAVAE 53
Query: 61 QLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKG--ARSPIGIQDRIDRMMD 118
+ FW+ + + L + ++ ++ D + + + R +
Sbjct: 54 RRFWTASTYDEGIALLGKQIENPYRDLAIAGREASEQIFDAQQLLIGSLNRNEWVSRCLK 113
Query: 119 VAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIE 177
V++ + + + L S+ S VG+ G V G+ +I ++ + G + E
Sbjct: 114 VSLDDYVARLQRGTAILASVGSTAPFVGLFGTVWGIYHALMAIGASAQASLDHVAGPVGE 173
Query: 178 SLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFS 218
SLI GL V+IP+ + YN +K ++ F +E
Sbjct: 174 SLIMTAFGLFVAIPAVLGYNGVSRGNKAVVHKLVRFTHEVH 214
>gi|171058621|ref|YP_001790970.1| MotA/TolQ/ExbB proton channel [Leptothrix cholodnii SP-6]
gi|170776066|gb|ACB34205.1| MotA/TolQ/ExbB proton channel [Leptothrix cholodnii SP-6]
Length = 263
Score = 176 bits (448), Expect = 2e-42, Method: Composition-based stats.
Identities = 52/227 (22%), Positives = 94/227 (41%), Gaps = 12/227 (5%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YGLA AL+ + K ++ L+ + S SW VI+ K + + RQ +E +
Sbjct: 45 NPYGLA-------ALWAGSDVVAKIVLMLMTVMSAGSWYVIVVKLLEQARVGRQAQEAQD 97
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
FW + +L I + +K G I + + + A+
Sbjct: 98 RFWRAGDVRQGADAL--SVGSPFRFIAEAGAEASRK--HDGLLGQIDLNTWVTMSIQRAV 153
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLI 180
R + L+FL ++ S VG+ G V G+ +I ++ + G + E+LI
Sbjct: 154 ERVHSRLQGGLAFLATVGSTAPFVGLFGTVWGIYHALTAIGVAGQASIDKVAGPVGEALI 213
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEG 227
+GL V++P+ + YN + +K + F ++ A+L Q
Sbjct: 214 MTAIGLAVAVPAVLGYNWLVRRNKVAMDDVRAFGSDLHAVLLAQANA 260
>gi|319639111|ref|ZP_07993868.1| biopolymer transporter exbB [Neisseria mucosa C102]
gi|317399689|gb|EFV80353.1| biopolymer transporter exbB [Neisseria mucosa C102]
Length = 219
Score = 176 bits (448), Expect = 2e-42, Method: Composition-based stats.
Identities = 44/221 (19%), Positives = 107/221 (48%), Gaps = 5/221 (2%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
MD+S+ +F + + + L+ + S+++WSVI+ + + + ++ + ++L + +
Sbjct: 1 MDLSL--VFKSGDVVLIGVFVLMLLMSVVTWSVIVIRCIKYCKAKKGNTQVKELMLNAFT 58
Query: 69 LETVCKSLKN--HHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
L + K +A + A ++++ K + + + + + ++++ +
Sbjct: 59 LADAVQKAKAVEAPMSRVADESLRAYQNYRQTTSKSLIDELPLNEYLVVHIRNSMSQTMR 118
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLG 185
+ ++ L S+ + +G+LG V G+ I+ ++ ++ G I E+L+S +G
Sbjct: 119 QFDYGMTALASIGATAPFIGLLGTVWGIYHALIGISESGQMSIAAVAGPIGEALVSTAVG 178
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
L V+IP+ +AYN +K A M+ FA++ L Q +
Sbjct: 179 LFVAIPAVLAYNFLNRGTKTIAQDMDAFAHDLHVRLLNQKD 219
>gi|205356572|ref|ZP_03223335.1| biopolymer transport protein [Campylobacter jejuni subsp. jejuni
CG8421]
gi|205345577|gb|EDZ32217.1| biopolymer transport protein [Campylobacter jejuni subsp. jejuni
CG8421]
Length = 253
Score = 176 bits (448), Expect = 2e-42, Method: Composition-based stats.
Identities = 51/216 (23%), Positives = 101/216 (46%), Gaps = 10/216 (4%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
+++S+ +L+ VK +I +L +FSIL+W+V I K + F +++ Q ++
Sbjct: 40 IELSLSSLYQNADEVVKGVIYILVLFSILAWAVFISKLMQFYFMKKNLDSSIQKIKELKN 99
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
L + ++ + L E + +K I++RI+ + I++++
Sbjct: 100 LNELDQTKDFAGVLSL---------EIQDELEKSEYKNDHIKERIELRLQNTISKQITAS 150
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
LS L S+ ++ +G+ G V G+M F IA + ++ V PGI ++L + GL
Sbjct: 151 KNGLSLLASIGASAPFIGLFGTVWGIMNAFIGIANLGNASLAVVAPGIAKALFATAFGLI 210
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
+IP+ + YN + K ++ AN + R
Sbjct: 211 AAIPAVLFYNYLTRKNLKLMHHLDELANFVYILFHR 246
>gi|225075999|ref|ZP_03719198.1| hypothetical protein NEIFLAOT_01026 [Neisseria flavescens
NRL30031/H210]
gi|224952714|gb|EEG33923.1| hypothetical protein NEIFLAOT_01026 [Neisseria flavescens
NRL30031/H210]
Length = 219
Score = 176 bits (447), Expect = 2e-42, Method: Composition-based stats.
Identities = 44/221 (19%), Positives = 106/221 (47%), Gaps = 5/221 (2%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
MD+S+ +F + + + L+ + S+++WSVI+ + + + ++ + ++L + +
Sbjct: 1 MDLSL--VFKSGDVVLIGVFVLMLLMSVVTWSVIVIRCIKYRKAKKGNAQVKELMLNAFT 58
Query: 69 LETVCKSLKN--HHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
L + K +A + A ++++ K + + + + + ++ + +
Sbjct: 59 LADAVQKAKAVEAPMSNVADESLRAYQNYRQTTSKSLIDELPLNEYLVVHIRNSLTQTMR 118
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLG 185
+ ++ L S+ + +G+LG V G+ I+ ++ ++ G I E+L+S +G
Sbjct: 119 QFDYGMTALASIGATAPFIGLLGTVWGIYHALIGISESGQMSIAAVAGPIGEALVSTAVG 178
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
L V+IP+ +AYN +K A M+ FA++ L Q +
Sbjct: 179 LFVAIPAVLAYNFLNRGTKTIAQDMDAFAHDLHVRLLNQKD 219
>gi|330945602|gb|EGH47102.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. pisi str.
1704B]
Length = 219
Score = 176 bits (447), Expect = 2e-42, Method: Composition-based stats.
Identities = 49/203 (24%), Positives = 91/203 (44%), Gaps = 4/203 (1%)
Query: 25 KCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGL 84
K ++ L I SI++W++ I K + +R+ R +SL + +
Sbjct: 1 KAVMIGLAIASIITWTIWISKGFELLGAKRRLRGEIANLKKARSLSEASATASTEGTLA- 59
Query: 85 AAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLL 144
+ A+ E + S +R GI++R+ ++ +A ++ L ++ S
Sbjct: 60 HLLVHDALEEMRLSA--NSREREGIKERVSFRLERLVAACGRNMSMGTGVLATIGSTAPF 117
Query: 145 VGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDS 203
VG+ G V G+M F IA + N+ V PGI E+L++ LGL +IP+ + YN F
Sbjct: 118 VGLFGTVWGIMNSFIGIAKTQTTNLAVVAPGIAEALLATALGLVAAIPAVVIYNVFARSI 177
Query: 204 KKFAMQMEGFANEFSAILSRQTE 226
+ Q+ + ++SR +
Sbjct: 178 AGYKAQVSDASAHVLLLVSRDLD 200
>gi|296114478|ref|ZP_06833131.1| ExbB/TolQ/MotA [Gluconacetobacter hansenii ATCC 23769]
gi|295978834|gb|EFG85559.1| ExbB/TolQ/MotA [Gluconacetobacter hansenii ATCC 23769]
Length = 368
Score = 176 bits (447), Expect = 2e-42, Method: Composition-based stats.
Identities = 43/222 (19%), Positives = 93/222 (41%), Gaps = 11/222 (4%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YGL AL+ + ++ ++ S+ +W ++I+K +L ++
Sbjct: 126 NPYGLG-------ALWANGDFIARGVLLIMVFMSVGTWVIMIKKFFEQASLFSAGKDVTS 178
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
FW+ +++ +L N I + + + + + I + + ++
Sbjct: 179 KFWTKPTIKQGADALPA--NSPFRYIAETGVKA-AEHHEGTMQESIDLHSWTTMSIQRSV 235
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLI 180
+ L+FLG++ S VG+ G V G+ +I + ++ + G + ESLI
Sbjct: 236 DLIQTRLQGGLAFLGTVGSTSPFVGLFGTVWGIYHALTAIGIAGNASIDKVAGPVGESLI 295
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
+GL ++P+ + YN + +K + FA + +IL
Sbjct: 296 MTAIGLGTAVPAVLGYNLLVRRNKGAMDLVRNFAADLQSILM 337
>gi|50084695|ref|YP_046205.1| putative biopolymer transport protein (ExbB-like) [Acinetobacter
sp. ADP1]
gi|49530671|emb|CAG68383.1| putative biopolymer transport protein (ExbB-like) [Acinetobacter
sp. ADP1]
Length = 244
Score = 176 bits (447), Expect = 2e-42, Method: Composition-based stats.
Identities = 46/201 (22%), Positives = 96/201 (47%), Gaps = 3/201 (1%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCK--SLKNHHNIG 83
I LL FSI++W +I+ K V +Q + F + FW ++L L
Sbjct: 11 GTIWLLVAFSIVTWVLIVVKVVQTQRATKQSKIFVEEFWKAKNLSDAVTKSELGEGPAAR 70
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
+A + E + + ++ QD ++R + + E ++ + + L S+ +
Sbjct: 71 VANAGFQTLIEADEKTHQDLQNSWSRQDLLERHLSKQVLTERRQLEKGSALLASIGNNAP 130
Query: 144 LVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIPSSIAYNKFIED 202
+G+ G V G++ Q+IA + ++ + G I E+L++ +G+ V++P+ +AYN F+
Sbjct: 131 FIGLFGTVFGIIHALQAIASSGNASMDVVAGPIGEALVATGIGIAVAVPAVLAYNYFVRK 190
Query: 203 SKKFAMQMEGFANEFSAILSR 223
K ++ FA +F ++ +
Sbjct: 191 VKTIGADLDDFATDFVSLNQK 211
>gi|325122240|gb|ADY81763.1| putative biopolymer transport protein (ExbB-like) [Acinetobacter
calcoaceticus PHEA-2]
Length = 244
Score = 176 bits (447), Expect = 2e-42, Method: Composition-based stats.
Identities = 46/201 (22%), Positives = 96/201 (47%), Gaps = 3/201 (1%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCK--SLKNHHNIG 83
I LL FSI++W +I+ K V +Q + F + FW ++L L
Sbjct: 11 GTIWLLVAFSIVTWVLIVIKVVQTQRATKQSKLFVEEFWKAKNLSDAVTKSELGEGPAAR 70
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
+A + E + + ++ QD ++R + + E ++ + + L S+ +
Sbjct: 71 VANTGFQTLIEADEKTHQDLQNSWSRQDLLERHLSKQVLTERRQLEKGSALLASIGNNAP 130
Query: 144 LVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIPSSIAYNKFIED 202
+G+ G V G++ Q+IA + ++ + G I E+L++ +G+ V++P+ +AYN F+
Sbjct: 131 FIGLFGTVFGIIHALQAIAHSGNASMDVVAGPIGEALVATGIGIAVAVPAVLAYNYFVRK 190
Query: 203 SKKFAMQMEGFANEFSAILSR 223
K ++ FA +F ++ +
Sbjct: 191 VKTIGADLDDFATDFVSLNQK 211
>gi|325122250|gb|ADY81773.1| putative biopolymer transport protein (ExbB-like) [Acinetobacter
calcoaceticus PHEA-2]
Length = 229
Score = 176 bits (447), Expect = 2e-42, Method: Composition-based stats.
Identities = 45/197 (22%), Positives = 97/197 (49%), Gaps = 5/197 (2%)
Query: 31 LFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMS 90
+ FS+++W +I+ K V RQ + F + FWS ++L+ + +A I +
Sbjct: 1 MVAFSVVTWGLIVIKLVQTQKADRQSKAFAEEFWSAKNLQDAIQK-SELGQGPVARIANT 59
Query: 91 AMSEWKKSCD---KGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGI 147
+ D + + QD ++R + I E ++ + + L S+ + +G+
Sbjct: 60 GFKTLADADDDTHQDLQHSWSRQDLLERHLRKQILSERRQLEKGSALLASIGNNAPFIGL 119
Query: 148 LGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIPSSIAYNKFIEDSKKF 206
G V G++ Q+IA + ++ + G I E+L++ +G+ V++P+ +AYN F+ K
Sbjct: 120 FGTVFGIIHALQAIAHSGNASMDVVAGPIGEALVATGIGIAVAVPAVLAYNYFVRKVKTI 179
Query: 207 AMQMEGFANEFSAILSR 223
+++ FA +F ++ +
Sbjct: 180 GAELDDFATDFVSLNQK 196
>gi|330964940|gb|EGH65200.1| TonB system transport protein ExbB [Pseudomonas syringae pv.
actinidiae str. M302091]
Length = 230
Score = 176 bits (447), Expect = 2e-42, Method: Composition-based stats.
Identities = 50/206 (24%), Positives = 96/206 (46%), Gaps = 4/206 (1%)
Query: 22 LAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHN 81
L + +TLL IFS+++W++++ K++ L RQ R + FW+ + L+ H
Sbjct: 8 LITQSSMTLLVIFSLVTWALLLGKTLQHWRLSRQNRRYSTQFWAARDLKNALHL--PHSE 65
Query: 82 IGLAAIFMSAMSEWKKSCDK-GARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSS 140
LA + + D QD ++R + I +E + + L S+ S
Sbjct: 66 GSLARLTDAGAQALATPHDSPDLGHSWNRQDLLERSLRQQIHKERRRLESGMILLASIGS 125
Query: 141 AGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIPSSIAYNKF 199
+G+ G V G++ +I+ S ++ + G I ++L++ +G+ V++P+ +AYN F
Sbjct: 126 TAPFIGLFGTVFGIIHALTAISQAKSASIAVVAGPIGDALVATGVGIAVAVPAVLAYNFF 185
Query: 200 IEDSKKFAMQMEGFANEFSAILSRQT 225
K +E FA +F + R
Sbjct: 186 GRRMKLVIADLEEFAVDFLNLSQRNA 211
>gi|77456447|ref|YP_345952.1| MotA/TolQ/ExbB proton channel [Pseudomonas fluorescens Pf0-1]
gi|77380450|gb|ABA71963.1| outer membrane transport energization protein ExbB [Pseudomonas
fluorescens Pf0-1]
Length = 241
Score = 176 bits (447), Expect = 2e-42, Method: Composition-based stats.
Identities = 52/202 (25%), Positives = 103/202 (50%), Gaps = 5/202 (2%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLA 85
+I LL +FS+ +W + + K+V F L+ Q R+F + FW+ SL++ + L A
Sbjct: 14 AVIWLLVVFSVATWGLALLKAVQFGRLKAQDRKFHKRFWAASSLDSAAE-LSETQPGAAA 72
Query: 86 AIFMSAMSEWKKSCDKGARS---PIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAG 142
+ + + + A I QDR++R + I RE + L+ + S+ S
Sbjct: 73 RVAQAGYAAIQVGEAPQANDLSQAINHQDRLERALRQQIVRERRSLETGLAVVASIGSTS 132
Query: 143 LLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIPSSIAYNKFIE 201
+G+ G V G+M + I+ S ++ ++ G I +L++ +G+ V++P+ + YN F+
Sbjct: 133 PFIGLFGTVWGIMEALKGISAAGSASLETVAGPIGAALVATGVGIAVAVPAVLVYNYFLR 192
Query: 202 DSKKFAMQMEGFANEFSAILSR 223
K A ++ FA++F ++ +
Sbjct: 193 RLKLTAADLDDFAHDFYSLAQK 214
>gi|332283867|ref|YP_004415778.1| putative TolQ-like translocation protein [Pusillimonas sp. T7-7]
gi|330427820|gb|AEC19154.1| putative TolQ-like translocation protein [Pusillimonas sp. T7-7]
Length = 293
Score = 176 bits (447), Expect = 2e-42, Method: Composition-based stats.
Identities = 55/215 (25%), Positives = 94/215 (43%), Gaps = 5/215 (2%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
+ + + K + +L I S++SW +I KS + ++ + +F + FW+ SLE V
Sbjct: 56 MLHFISESDIVGKSLFGILVIMSVVSWYLIFVKSFMNMRVQLRSNKFLREFWAASSLEQV 115
Query: 73 CKSLK----NHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ N LA+ + A + K I R + I E +
Sbjct: 116 ENEIATHGANEPFAHLASHAIHARNHHAKYGALKLEEKGSTSAFITRTIRKVIDEETARL 175
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLC 187
L+ L S+ S VG+ G V G+ I V I G + E+LI LGL
Sbjct: 176 ENGLTVLASIGSTAPFVGLFGTVWGVYHALIGIGLSDGVTVNRIAGPVGEALIMTGLGLA 235
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
V+IP+ +AYN F+ ++ + +++ FA++ LS
Sbjct: 236 VAIPAVLAYNGFVRGNRVYLARLDAFAHDLFTFLS 270
>gi|300691123|ref|YP_003752118.1| Biopolymer transport protein [Ralstonia solanacearum PSI07]
gi|299078183|emb|CBJ50826.1| Biopolymer transport protein [Ralstonia solanacearum PSI07]
Length = 243
Score = 176 bits (447), Expect = 2e-42, Method: Composition-based stats.
Identities = 50/235 (21%), Positives = 98/235 (41%), Gaps = 13/235 (5%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
+ ++ + L+ Q + + LL + S+ SW VI+ K+ + I L+ + E+ FW
Sbjct: 1 MQELGLSHLWTQGDIVARGTALLLLLMSLASWIVILTKAWDLIRLKSMAQGAEKRFWHSD 60
Query: 68 SLETVCKSLKNHHNIGLAAIFMSA--MSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
+ ++L + + + ++ ++ + I D I R + I +
Sbjct: 61 DFDHAMQTLGAPKDNPFYTLAQTGREAAQHHRASHPQLHDVMDISDWITRSLKSTIDESV 120
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILL 184
++ L+ L S+ S VG+ G V G+ I + + G + ESLI
Sbjct: 121 GQMQSGLAVLASVGSTAPFVGLFGTVWGIYHALIGIGAVGVPTIDKVAGPVGESLIMTAF 180
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL----------SRQTEGNI 229
GL V+IP+ + YN +K ++ FA++ A +RQ + N+
Sbjct: 181 GLAVAIPAVLGYNALTRGNKSVIAKLNRFAHDLHAYFVTGARLRPGAARQDDANV 235
>gi|295677679|ref|YP_003606203.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. CCGE1002]
gi|295437522|gb|ADG16692.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. CCGE1002]
Length = 238
Score = 176 bits (447), Expect = 2e-42, Method: Composition-based stats.
Identities = 46/214 (21%), Positives = 81/214 (37%), Gaps = 8/214 (3%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
I + +L SI SW +I KS +RQ FW +L
Sbjct: 7 IIHYLQTSDAITHAVAYVLLAMSIASWCFLIVKSWILTRAKRQSSRAITRFWQAPTLAEG 66
Query: 73 CKSLKNHHNIGLAAIFMSAMSEWKKSCD----KGARSPIGIQDRIDRMMDVAIARELEEI 128
L+ +F + + + + +R+ R + A+ +
Sbjct: 67 VAILRRADR---ERVFAPLAEAALHAAEVDIPGALLARVERSERVLRALRQALNASHRRL 123
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLC 187
L S+ S VG+LG V G+ SIA + ++ G + E+LI GL
Sbjct: 124 EFGQVLLASVGSTAPFVGLLGTVWGIYHALGSIAASGQAQIENVAGPVGEALIMTAFGLV 183
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
V+IP+ + YN ++ +++GFA++ A +
Sbjct: 184 VAIPAVLGYNVLGRLVRQLTEELDGFAHDLHAYV 217
>gi|82523891|emb|CAI78614.1| biopolymer transport proteins [uncultured delta proteobacterium]
Length = 203
Score = 176 bits (447), Expect = 2e-42, Method: Composition-based stats.
Identities = 47/188 (25%), Positives = 85/188 (45%), Gaps = 12/188 (6%)
Query: 49 FITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIG 108
F + R+ +F FW+ +SL KN +A +F E +
Sbjct: 2 FRSAIRKSEKFTDAFWNSKSLAGAYNETKNLKESHIAEVFRHGYIELGRLLKVQDNDRDN 61
Query: 109 IQ-----------DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGF 157
++ D +DR + A+ E + ++ + FL + + +G+ G V G+M
Sbjct: 62 LKTKSISKSMNWTDNLDRSLRRAMNNESQRLSRAIPFLATTGNTAPFIGLFGTVWGIMDS 121
Query: 158 FQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANE 216
F IA + ++ V PGI E+L++ GL +IP+ +AYN F+ + + ME F ++
Sbjct: 122 FHGIAQKGNASLAVVAPGIAEALVATAAGLIAAIPAVVAYNYFVTKLEGMNLDMEAFKDD 181
Query: 217 FSAILSRQ 224
F I+ R+
Sbjct: 182 FLNIIRRE 189
>gi|322435210|ref|YP_004217422.1| MotA/TolQ/ExbB proton channel [Acidobacterium sp. MP5ACTX9]
gi|321162937|gb|ADW68642.1| MotA/TolQ/ExbB proton channel [Acidobacterium sp. MP5ACTX9]
Length = 256
Score = 176 bits (446), Expect = 2e-42, Method: Composition-based stats.
Identities = 44/209 (21%), Positives = 92/209 (44%), Gaps = 3/209 (1%)
Query: 15 ALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCK 74
+ G ++ +L + S+LSW+V+I K +F Q + F + F L +
Sbjct: 30 DMLHNSGPVAMTVLIVLGLASLLSWTVMISKWRSFGAANTQSKRFLRAFRKSGRLSEISA 89
Query: 75 SLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSF 134
+ L A+F E+ + R + ++R A + L + E++++
Sbjct: 90 VAEQFRPSPLVAVFTEINDEYYR--QTNGRGLPKNPNGLERAAATASSEALTVMEERVTW 147
Query: 135 LGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSS 193
L ++++ +G+ G V+G++ F + + + PGI E+LI+ G+ V++P+
Sbjct: 148 LATIANIAPFIGLFGTVMGIIDAFHGLGASGTATLRAVAPGISEALITTAAGIVVAVPAV 207
Query: 194 IAYNKFIEDSKKFAMQMEGFANEFSAILS 222
+ YN + FA + + F E +
Sbjct: 208 VGYNHLTSQLRDFAARTDDFGRELLNAIE 236
>gi|27804814|gb|AAO22858.1| adventurous gliding motility protein X [Myxococcus xanthus]
Length = 298
Score = 176 bits (446), Expect = 2e-42, Method: Composition-based stats.
Identities = 49/198 (24%), Positives = 92/198 (46%), Gaps = 8/198 (4%)
Query: 35 SILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSE 94
S+ SW++I K+ R Q F FW LE + ++ + L+ +F + E
Sbjct: 98 SVASWALIAMKASQLAKARAQSLTFLDTFWKASRLEAIYQTAQKLDGSPLSKVFCAGYEE 157
Query: 95 WKKSCDK-------GARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGI 147
K +G + ++R + A ++ E+ ++SFLG++ +A VG+
Sbjct: 158 LTKLAQAKEGGTEGALAERLGGIENVERALHRASTAQITELENRVSFLGTVGAASPFVGL 217
Query: 148 LGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIPSSIAYNKFIEDSKKF 206
G V+G++ F IA + + ++ + +L + GL +IP+ +AYN F+ K F
Sbjct: 218 FGTVIGILSAFNQIAEQGNATLATVAAPVGNALFATAAGLFAAIPAVVAYNSFVSRIKVF 277
Query: 207 AMQMEGFANEFSAILSRQ 224
+M F+ +F I+ R
Sbjct: 278 DTEMSNFSADFLNIIKRH 295
>gi|254247706|ref|ZP_04941027.1| MotA/TolQ/ExbB proton channel [Burkholderia cenocepacia PC184]
gi|124872482|gb|EAY64198.1| MotA/TolQ/ExbB proton channel [Burkholderia cenocepacia PC184]
Length = 219
Score = 176 bits (446), Expect = 3e-42, Method: Composition-based stats.
Identities = 50/195 (25%), Positives = 84/195 (43%), Gaps = 7/195 (3%)
Query: 34 FSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMS 93
S+LSW VI+ K N I L R + EQ FW + + K L + F++
Sbjct: 2 MSVLSWIVIVIKGWNVIRLNRLTKNAEQAFWHSDNFDDGIKKLGLAASTPNDNPFLALAL 61
Query: 94 EWKKSCDKGARSPIGIQDRID------RMMDVAIARELEEITEKLSFLGSMSSAGLLVGI 147
K++ D ++ + DR+D R + + + + L+ L S+ S VG+
Sbjct: 62 SGKEAADHHHQTQPHLHDRMDVSDWVTRCLKDTMDEGISRMQSGLAILASVGSTAPFVGL 121
Query: 148 LGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIPSSIAYNKFIEDSKKF 206
G V G+ +I ++ + G + ESLI GL V+IP+ + YN +K
Sbjct: 122 FGTVWGIYHALLAIGATGQTSIDQVAGPVGESLIMTAFGLFVAIPAVLGYNALTRANKGV 181
Query: 207 AMQMEGFANEFSAIL 221
++ FA+ A
Sbjct: 182 VSKLRRFAHGLHAYF 196
>gi|162147179|ref|YP_001601640.1| biopolymer transport exbB protein [Gluconacetobacter diazotrophicus
PAl 5]
gi|209544233|ref|YP_002276462.1| MotA/TolQ/ExbB proton channel [Gluconacetobacter diazotrophicus PAl
5]
gi|161785756|emb|CAP55327.1| Biopolymer transport exbB protein [Gluconacetobacter diazotrophicus
PAl 5]
gi|209531910|gb|ACI51847.1| MotA/TolQ/ExbB proton channel [Gluconacetobacter diazotrophicus PAl
5]
Length = 355
Score = 176 bits (446), Expect = 3e-42, Method: Composition-based stats.
Identities = 45/221 (20%), Positives = 92/221 (41%), Gaps = 11/221 (4%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YGL AL+ + + ++ ++ S+ +W +++ K + +E
Sbjct: 115 NPYGLD-------ALWRNGDIIARGVLLIMVAMSLGTWYIMVTKFFEQARMFSAAKEASS 167
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
+FW+ S++ +LK A +E + + I + + A+
Sbjct: 168 VFWTKSSIQEGAAALKPTSPFRYIADTGIVAAEH---HEGTMQESIDLHSWTSMSIQRAV 224
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLI 180
+ L+FLG++ S VG+ G V G+ +I ++ + G + ESLI
Sbjct: 225 DTIQSRLQGGLAFLGTVGSTSPFVGLFGTVWGIYHALTAIGIAGQASIDKVAGPVGESLI 284
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+GL ++P+ + YN + +K ++ FA + +IL
Sbjct: 285 MTAIGLGTAVPAVLGYNLLVRRNKGAMDKVRNFAADLQSIL 325
>gi|322437192|ref|YP_004219404.1| MotA/TolQ/ExbB proton channel [Acidobacterium sp. MP5ACTX9]
gi|321164919|gb|ADW70624.1| MotA/TolQ/ExbB proton channel [Acidobacterium sp. MP5ACTX9]
Length = 248
Score = 176 bits (446), Expect = 3e-42, Method: Composition-based stats.
Identities = 60/224 (26%), Positives = 107/224 (47%), Gaps = 5/224 (2%)
Query: 7 AIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG 66
A S+ ++ M + I+ LLFI SI S +VII +++ F R Q REF +
Sbjct: 25 ASNSFSLMDMWGHMSWIPRLIVMLLFIMSIWSLAVIIDRAIYFSAARSQSREFAPKVANA 84
Query: 67 ---QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAR 123
+L+ K LA + S + E++ GA S I + R ++ + A
Sbjct: 85 LKTGNLDAAIKVADTTKKSHLAEVVTSGLQEFRSFGSGGAISEAQI-ESSKRALERSEAI 143
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISI 182
++ L L ++ S +G+LG V+G++ FQ IA ++ + GI E+L++
Sbjct: 144 VHSKLKRGLGGLATIGSTAPFIGLLGTVIGILNAFQQIATQKTSGIGAVAGGISEALVTT 203
Query: 183 LLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
GL V+IP+ +A+N F + F ++M+ ++E +Q+
Sbjct: 204 AFGLVVAIPAVMAFNYFTNKVEAFDVEMDNSSSELVDYFIKQSH 247
>gi|170695375|ref|ZP_02886521.1| MotA/TolQ/ExbB proton channel [Burkholderia graminis C4D1M]
gi|170139775|gb|EDT07957.1| MotA/TolQ/ExbB proton channel [Burkholderia graminis C4D1M]
Length = 239
Score = 175 bits (445), Expect = 3e-42, Method: Composition-based stats.
Identities = 49/211 (23%), Positives = 88/211 (41%), Gaps = 2/211 (0%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
I + +L S+ SW +I KS + +RQ FW +L
Sbjct: 7 IIHYLQTSDAITHGVAYVLLAMSVASWCFLIVKSWVLVRAKRQATRAIARFWQAPTLAEG 66
Query: 73 CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGAR-SPIGIQDRIDRMMDVAIARELEEITEK 131
+LK + + A + GA + + +R+ R + A++ +
Sbjct: 67 VAALKRADRERVFSPLAEAALHAAEVDIPGALLARVERGERVLRALRQALSASQRRLEFG 126
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSI 190
L S+ S VG+LG V G+ SIA + ++ G + E+LI GL V+I
Sbjct: 127 QVLLASVGSTAPFVGLLGTVWGIYHALGSIAASGQAQIENVAGPVGEALIMTAFGLVVAI 186
Query: 191 PSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
P+ +AYN ++ + +++GFA++ A +
Sbjct: 187 PAVLAYNVLGRLVRQLSEELDGFAHDLHAYV 217
>gi|296446767|ref|ZP_06888706.1| tonB-system energizer ExbB [Methylosinus trichosporium OB3b]
gi|296255770|gb|EFH02858.1| tonB-system energizer ExbB [Methylosinus trichosporium OB3b]
Length = 267
Score = 175 bits (445), Expect = 3e-42, Method: Composition-based stats.
Identities = 57/220 (25%), Positives = 102/220 (46%), Gaps = 4/220 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
D+S++++F+ + VK ++ L SI +W+V+I K+V RR+ R + +
Sbjct: 35 PHDLSVWSMFVNADIVVKVVMLGLLAASIGTWTVLIAKTVELSRSRRRVRASIERLQEAR 94
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
L +L + + A I A+ E++ S D A G+++R+ E
Sbjct: 95 GLAEARVALGSDDALASALI-AEALREFRLSSDLSASG--GLKERVASSFAELERAEGLS 151
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
I L S+ S G VG+ G V G+M F I+ + N+ V PGI E+L++ +GL
Sbjct: 152 IRRGTGLLASVGSTGPFVGLFGTVWGIMNSFIGISKAQTTNLAVVAPGIAEALLATAIGL 211
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ + YN + + + E ++SR +
Sbjct: 212 FAAIPAVLIYNHLARQIGAYQELVSNLSGELLRVVSRDID 251
>gi|296448897|ref|ZP_06890718.1| MotA/TolQ/ExbB proton channel [Methylosinus trichosporium OB3b]
gi|296253595|gb|EFH00801.1| MotA/TolQ/ExbB proton channel [Methylosinus trichosporium OB3b]
Length = 245
Score = 175 bits (445), Expect = 4e-42, Method: Composition-based stats.
Identities = 58/221 (26%), Positives = 99/221 (44%), Gaps = 4/221 (1%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
++ LF+Q VK +I LL + S W+VI +K + L R+
Sbjct: 13 HSLTPVELFLQADSIVKTVIVLLILASAWGWTVIAEKLIRLGVLHRRAARLIDSVQKELP 72
Query: 69 LETVCKSLKNHHN-IGLAAIFMSAMSEWKKSCD--KGARSPIGIQDRIDRMMDVAIAREL 125
+ + S L ++ + + E +S D +Q+R+ R+ +A A +
Sbjct: 73 VADLPASFDAASPEDPLVQVYRAMVDENARSSDLQHSETQRDALQERVHRVGQLAAANAI 132
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILL 184
+ + +L L ++ + VG+ G V G+M FQ IA + ++ V PGI E+L + L
Sbjct: 133 DHLHARLQGLATIGAVAPFVGLFGTVWGIMNSFQGIAASNNTSLAVVAPGIAEALFATAL 192
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
GL +IP+ I YN+ D + ++ F F LSRQ
Sbjct: 193 GLVAAIPAVIFYNRISGDIGAYGKRLNSFIGVFEVELSRQL 233
>gi|145589325|ref|YP_001155922.1| MotA/TolQ/ExbB proton channel [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
gi|145047731|gb|ABP34358.1| outer membrane transport energization protein ExbB
[Polynucleobacter necessarius subsp. asymbioticus
QLW-P1DMWA-1]
Length = 230
Score = 175 bits (445), Expect = 4e-42, Method: Composition-based stats.
Identities = 49/217 (22%), Positives = 90/217 (41%), Gaps = 7/217 (3%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
I L+++ + + L I SI++W +++ + LR+ + + FW S E
Sbjct: 5 FGIANLWLEGDGITRFVAIALLICSIVTWVILLTRFWELRNLRK-LKPELEQFWRATSYE 63
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQ-----DRIDRMMDVAIAREL 125
S NH I SA + + + +Q + + R + I
Sbjct: 64 QGLASFSNHAANPYYQIAKSAATASTHHQSQSSNRRELLQTLNYSEWMARSIKNGIDSIA 123
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILL 184
+ + L+FLGS + +G+ G V G+ +I+ S + + G I E+LI L
Sbjct: 124 ASLQKGLTFLGSTGAVAPFIGLFGTVWGIYHALIAISSSGSAQLDQVAGPIGEALIMTAL 183
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
GL V+IP+ + +N +K ++ F N+ A
Sbjct: 184 GLAVAIPAVLGFNALNRGNKLLVAELNRFGNDLLAYF 220
>gi|304313302|ref|YP_003812900.1| MotA/TolQ/ExbB proton channel protein [gamma proteobacterium HdN1]
gi|301799035|emb|CBL47278.1| MotA/TolQ/ExbB proton channel protein [gamma proteobacterium HdN1]
Length = 243
Score = 175 bits (445), Expect = 4e-42, Method: Composition-based stats.
Identities = 53/200 (26%), Positives = 95/200 (47%), Gaps = 3/200 (1%)
Query: 22 LAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHN 81
+ V + +L FS+L+W+VI K++ F L R + + FW +L+
Sbjct: 10 IFVTATLWVLLTFSLLTWTVIFAKAIQFSMLNRTDKGYADKFWQSGTLQQAACDCTGK-- 67
Query: 82 IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSA 141
+ I + + + R++R + + E + L+ L S+ S
Sbjct: 68 APMCNIARAGFQAMATHGGGNLGTGGKREHRLERHLRTQLHAERRSLEGGLTLLASIGST 127
Query: 142 GLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIPSSIAYNKFI 200
VG+ G V+G+M Q I S ++ + G I E+L++ +G+ V+IP+ +AYN F+
Sbjct: 128 APFVGLFGTVIGIMRALQDIGTSGSASLDVVAGPIGEALLATGIGIAVAIPAVLAYNFFL 187
Query: 201 EDSKKFAMQMEGFANEFSAI 220
SK A+++E FA +F AI
Sbjct: 188 RRSKLIALRLEDFAGDFLAI 207
>gi|258543131|ref|YP_003188564.1| ExbB/TolQ/MotA [Acetobacter pasteurianus IFO 3283-01]
gi|256634209|dbj|BAI00185.1| ExbB/TolQ/MotA [Acetobacter pasteurianus IFO 3283-01]
gi|256637269|dbj|BAI03238.1| ExbB/TolQ/MotA [Acetobacter pasteurianus IFO 3283-03]
gi|256640321|dbj|BAI06283.1| ExbB/TolQ/MotA [Acetobacter pasteurianus IFO 3283-07]
gi|256643378|dbj|BAI09333.1| ExbB/TolQ/MotA [Acetobacter pasteurianus IFO 3283-22]
gi|256646433|dbj|BAI12381.1| ExbB/TolQ/MotA [Acetobacter pasteurianus IFO 3283-26]
gi|256649486|dbj|BAI15427.1| ExbB/TolQ/MotA [Acetobacter pasteurianus IFO 3283-32]
gi|256652472|dbj|BAI18406.1| ExbB/TolQ/MotA [Acetobacter pasteurianus IFO 3283-01-42C]
gi|256655530|dbj|BAI21457.1| ExbB/TolQ/MotA [Acetobacter pasteurianus IFO 3283-12]
Length = 337
Score = 175 bits (445), Expect = 4e-42, Method: Composition-based stats.
Identities = 45/221 (20%), Positives = 94/221 (42%), Gaps = 11/221 (4%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YGL AL+ + + ++ ++ S+ +W ++I K + L +E +
Sbjct: 96 NPYGLG-------ALWSNGDIIARGVLLIMLTMSLGTWYIMITKFIEQARLFAAAKEATK 148
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
FW+ S++ +L + A +E + + I + + A+
Sbjct: 149 SFWTKHSIQEGASALTSTSPFRYIADTGIVAAEH---HEGTMQESIDLHSWTGMSIQRAV 205
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLI 180
+ + L+FLG++ S +G+ G V G+ +I ++ + G + ESLI
Sbjct: 206 NNIQNSLQKGLAFLGTVGSTSPFIGLFGTVWGIYHALTAIGIAGQASIDKVAGPVGESLI 265
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+GL ++P+ + YN + +K + FA++ +IL
Sbjct: 266 MTAIGLATAVPAVLGYNLLVRRNKTAMDLVRDFASDLQSIL 306
>gi|258541172|ref|YP_003186605.1| ExbB/TolQ/MotA [Acetobacter pasteurianus IFO 3283-01]
gi|258542394|ref|YP_003187827.1| ExbB/TolQ/MotA [Acetobacter pasteurianus IFO 3283-01]
gi|256632250|dbj|BAH98225.1| ExbB/TolQ/MotA [Acetobacter pasteurianus IFO 3283-01]
gi|256633472|dbj|BAH99447.1| ExbB/TolQ/MotA [Acetobacter pasteurianus IFO 3283-01]
gi|256635307|dbj|BAI01276.1| ExbB/TolQ/MotA [Acetobacter pasteurianus IFO 3283-03]
gi|256636531|dbj|BAI02500.1| ExbB/TolQ/MotA [Acetobacter pasteurianus IFO 3283-03]
gi|256638362|dbj|BAI04324.1| ExbB/TolQ/MotA [Acetobacter pasteurianus IFO 3283-07]
gi|256639584|dbj|BAI05546.1| ExbB/TolQ/MotA [Acetobacter pasteurianus IFO 3283-07]
gi|256641416|dbj|BAI07371.1| ExbB/TolQ/MotA [Acetobacter pasteurianus IFO 3283-22]
gi|256642640|dbj|BAI08595.1| ExbB/TolQ/MotA [Acetobacter pasteurianus IFO 3283-22]
gi|256644471|dbj|BAI10419.1| ExbB/TolQ/MotA [Acetobacter pasteurianus IFO 3283-26]
gi|256645695|dbj|BAI11643.1| ExbB/TolQ/MotA [Acetobacter pasteurianus IFO 3283-26]
gi|256647526|dbj|BAI13467.1| ExbB/TolQ/MotA [Acetobacter pasteurianus IFO 3283-32]
gi|256648748|dbj|BAI14689.1| ExbB/TolQ/MotA [Acetobacter pasteurianus IFO 3283-32]
gi|256650579|dbj|BAI16513.1| ExbB/TolQ/MotA [Acetobacter pasteurianus IFO 3283-01-42C]
gi|256651801|dbj|BAI17735.1| ExbB/TolQ/MotA [Acetobacter pasteurianus IFO 3283-01-42C]
gi|256653570|dbj|BAI19497.1| ExbB/TolQ/MotA [Acetobacter pasteurianus IFO 3283-12]
gi|256654792|dbj|BAI20719.1| ExbB/TolQ/MotA [Acetobacter pasteurianus IFO 3283-12]
Length = 337
Score = 175 bits (445), Expect = 4e-42, Method: Composition-based stats.
Identities = 45/221 (20%), Positives = 94/221 (42%), Gaps = 11/221 (4%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YGL AL+ + + ++ ++ S+ +W ++I K + L +E +
Sbjct: 96 NPYGLG-------ALWSNGDIIARGVLLIMLTMSLGTWYIMITKFIEQARLFAAAKEATK 148
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
FW+ S++ +L + A +E + + I + + A+
Sbjct: 149 SFWTKHSIQEGASALTSTSPFRYIADTGIVAAEH---HEGTMQESIDLHSWTGMSIQRAV 205
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLI 180
+ + L+FLG++ S +G+ G V G+ +I ++ + G + ESLI
Sbjct: 206 NNIQNSLQKGLAFLGTVGSTSPFIGLFGTVWGIYHALTAIGIAGQASIDKVAGPVGESLI 265
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+GL ++P+ + YN + +K + FA++ +IL
Sbjct: 266 MTAIGLATAVPAVLGYNLLVRRNKTAMDLVRDFASDLQSIL 306
>gi|310816632|ref|YP_003964596.1| ExbB family protein [Ketogulonicigenium vulgare Y25]
gi|308755367|gb|ADO43296.1| ExbB family protein [Ketogulonicigenium vulgare Y25]
Length = 291
Score = 175 bits (444), Expect = 4e-42, Method: Composition-based stats.
Identities = 50/221 (22%), Positives = 93/221 (42%), Gaps = 3/221 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
D+S +FM VK ++ L + ++ + + K++ RR+ R +L +
Sbjct: 61 AHDLSPVGMFMAADWVVKGVMIGLALATVTVLVLWLGKTLELWGARRRARNGLKLLAAST 120
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDK-GARSPIGIQDRIDRMMDVAIARELE 126
LE + + +A + +A E + S G++DRI + A
Sbjct: 121 RLEDAIIAFQGERG-AIALMVRAAEDEARLSLGALDYAGSDGMKDRIASRLQRLSAGAGR 179
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLG 185
+ L ++ + VG+ G V G+M F SIA + N+ V PGI E+L++ +G
Sbjct: 180 RLQRGTGILATVGAVAPFVGLFGTVWGIMNSFVSIAETQTTNLAVVAPGIAEALLATAIG 239
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
L +IP+ + YN F + + ++SR +
Sbjct: 240 LVAAIPAVVIYNGFARAVTGYRQILTDAGATIERLVSRDLD 280
>gi|163857006|ref|YP_001631304.1| biopolymer transport ExbB protein [Bordetella petrii DSM 12804]
gi|163260734|emb|CAP43036.1| biopolymer transport ExbB protein [Bordetella petrii]
Length = 321
Score = 175 bits (444), Expect = 5e-42, Method: Composition-based stats.
Identities = 56/217 (25%), Positives = 96/217 (44%), Gaps = 5/217 (2%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+ Q K + +L + S+++W +I+ K +N + +RR+ +F FW+ SLE
Sbjct: 77 MGFLHFVAQSDFVGKALFAILIVMSLVTWYLILVKFINNVRMRRRSADFLNKFWNSSSLE 136
Query: 71 TVCKSL----KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
V + L + M A + K + + R M I E
Sbjct: 137 QVENEIVTHGARDPFSHLTSHAMHAQAHHAKFGATKLEETGANGEFVTRTMRKVIDEETA 196
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLG 185
++ L+ L S+ S VG+ G V G+ I + I G + E+LI LG
Sbjct: 197 KLENGLTVLASVGSTAPFVGLFGTVWGVYHALVGIGLADGVTINRIAGPVGEALIMTGLG 256
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
L V+IP+ +AYN F+ ++ F +++ FA++ A LS
Sbjct: 257 LAVAIPAVLAYNAFVRGNRVFLSRLDAFAHDLFAFLS 293
>gi|316935513|ref|YP_004110495.1| tonB-system energizer ExbB [Rhodopseudomonas palustris DX-1]
gi|315603227|gb|ADU45762.1| tonB-system energizer ExbB [Rhodopseudomonas palustris DX-1]
Length = 266
Score = 174 bits (443), Expect = 5e-42, Method: Composition-based stats.
Identities = 46/216 (21%), Positives = 98/216 (45%), Gaps = 5/216 (2%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S + +F + VK ++ L I S+ +W+V + K++ + R+ + +L
Sbjct: 44 DLSPWGMFRNADIVVKVVMAGLAIASLATWTVWLSKTIELRRETARARDGLAKLETDTTL 103
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+ + + H+ ++ + +A E S G +DR+ ++ A +I
Sbjct: 104 AELGRDAEGAHD-AVSQLIQTAAREGSLS---GWTFDADFKDRVALRLERVEAAMARKIA 159
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCV 188
L ++ + VG+ G V G+M F I+ ++ N+ V PGI E+L++ LGL
Sbjct: 160 SGTGILATIGAVAPFVGLFGTVWGIMNAFIGISEAHTTNLAVVAPGIAEALLATALGLVA 219
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
++P+ + YN + + + + + ++SR
Sbjct: 220 AVPAVVIYNYLVRAIASYRALLGDASAQVLLLVSRD 255
>gi|330809804|ref|YP_004354266.1| membrane spanning protein TolQ [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327377912|gb|AEA69262.1| putative membrane spanning protein TolQ [Pseudomonas brassicacearum
subsp. brassicacearum NFM421]
Length = 235
Score = 174 bits (443), Expect = 6e-42, Method: Composition-based stats.
Identities = 61/220 (27%), Positives = 110/220 (50%), Gaps = 4/220 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
++I+ L L VK ++ L + S+LSW +IIQ+S RQ F Q F Q L
Sbjct: 8 MTIWGLISDASLLVKAVMLTLLLASLLSWYLIIQRSAVLQRNERQLNGFMQRFRGTQDLL 67
Query: 71 TVCKSLKN--HHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ + + G+ IF + + + + ++ + +P + + ++R + VAI+ + ++
Sbjct: 68 PLYREHAQVREDDGGVTPIFQAGVLAFTQL-NQPSSTPQVVLEGVERALQVAISEQEIQL 126
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
+ L FL ++ S +G+ G V G+M F ++ ++ PGI E+LI+ +GL
Sbjct: 127 EKGLQFLATVGSVSPYIGLFGTVWGIMNAFIGLSQVQQASLSTVAPGIAEALIATAIGLF 186
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEG 227
+IP+ IAYN+F + + F NE A L R+ G
Sbjct: 187 AAIPAVIAYNRFAARGQTLLTRYYAFGNELQARLHRKLHG 226
>gi|14041207|emb|CAC38749.1| ExbB protein [Bradyrhizobium japonicum]
Length = 258
Score = 174 bits (443), Expect = 7e-42, Method: Composition-based stats.
Identities = 48/223 (21%), Positives = 101/223 (45%), Gaps = 5/223 (2%)
Query: 5 GLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFW 64
L ++S + +F+ + VK ++ L + S+++W+V + K+V + +
Sbjct: 29 ALLPRNLSPWGMFLGADIIVKTVMIGLAVASVVTWTVWLAKTVELRRKSALAVQRTRALE 88
Query: 65 SGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARE 124
L + + H+ +A + S E + S G G+Q+R+ ++ A
Sbjct: 89 GRMKLAEAAERTGDAHD-AVAQLIQSCAKEAELS---GGIVDDGLQERVALRLERVEAAM 144
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISIL 183
+I L ++ + VG+ G V G+M F I+ ++ ++ V PGI E+L++
Sbjct: 145 SRQIARGTGVLATIGATAPFVGLFGTVWGIMNAFIGISESHTTSLAVVAPGIAEALLATA 204
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
LGL +IP+ + YN + + + + + ++SRQ +
Sbjct: 205 LGLVAAIPAVVIYNHLVRGIANYRALLGDASAQLMLLVSRQRD 247
>gi|114331602|ref|YP_747824.1| MotA/TolQ/ExbB proton channel [Nitrosomonas eutropha C91]
gi|114308616|gb|ABI59859.1| outer membrane transport energization protein ExbB [Nitrosomonas
eutropha C91]
Length = 265
Score = 174 bits (443), Expect = 7e-42, Method: Composition-based stats.
Identities = 50/217 (23%), Positives = 103/217 (47%), Gaps = 5/217 (2%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+ Q+ ++ LL S+ SW +I+ KS++ + R+ ++F + FW S+
Sbjct: 5 LGFSNFLTQVDSVGMSVLILLLTLSVASWYLIVTKSISNMIASRRAKDFLKHFWHIDSVP 64
Query: 71 TVCKSL----KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
+ + H + LA ++A ++ +K + + G + + R + ++ +E
Sbjct: 65 QLKTEISAMTDRHAFVQLAKTALTATADSQKHGLEKLAAAGGTNELLTRSLRNSLDQEAA 124
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLG 185
I L+ + S S+ +G+ G V G+ I + + G + E+LI LG
Sbjct: 125 RIEYGLTIIASAGSSAPYIGLFGTVWGIYHALIQIGLSGQGTLDKVAGPVGEALIMTALG 184
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
L V+IP+ +AYN FI ++ + Q++ FA++ I++
Sbjct: 185 LAVAIPAVLAYNAFIRRNRLWMAQLDDFAHDLYTIMT 221
>gi|193212304|ref|YP_001998257.1| protein TolQ [Chlorobaculum parvum NCIB 8327]
gi|193085781|gb|ACF11057.1| protein TolQ [Chlorobaculum parvum NCIB 8327]
Length = 220
Score = 174 bits (442), Expect = 8e-42, Method: Composition-based stats.
Identities = 46/193 (23%), Positives = 98/193 (50%), Gaps = 4/193 (2%)
Query: 34 FSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMS 93
FSILSW++I K +++ ++F F+ Q+ + + + ++ + L +F +
Sbjct: 30 FSILSWAIIAWKFGMVRKSKKESQDFLDSFFELQNTDRLFATSESFRSGSLPRVFRAGYI 89
Query: 94 EWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLG 153
E+ ++G +++ I R + + E + ++ + FL ++ + +G+ G V G
Sbjct: 90 EYSSMRNRG--DDARLKEHIRRAVKREVNTESKRLSRLVPFLATVGNTAPFIGLFGTVWG 147
Query: 154 MMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEG 212
+M FQ+I S ++ ++ PGI E+L++ GL +IP+ I YN + + +E
Sbjct: 148 IMSSFQNIGLMKSASLAAVAPGISEALVATATGLVAAIPAVIGYNYLTSEIGQIERDLED 207
Query: 213 FANEFS-AILSRQ 224
F +F + L++Q
Sbjct: 208 FVPDFVESYLNQQ 220
>gi|91976831|ref|YP_569490.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris BisB5]
gi|91683287|gb|ABE39589.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris BisB5]
Length = 265
Score = 174 bits (442), Expect = 8e-42, Method: Composition-based stats.
Identities = 49/217 (22%), Positives = 93/217 (42%), Gaps = 5/217 (2%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S + +F+ + V+ ++ L + S+ +W+V + KS+ R L +G +L
Sbjct: 43 DLSPWGMFVNADMVVRTVMIGLALASLAAWTVWLAKSIELRRNVTLARRGLDLLDNGATL 102
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
V + +A + S E S G G DR+ ++ A + +
Sbjct: 103 AQVEAECGEDSDT-VAQMIRSVAREASLS---GGIQDDGFADRVSLRLERVEAAAVRRVA 158
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCV 188
L S+ + VG+ G V G+M F I+ + N+ V PGI E+L++ LGL
Sbjct: 159 IGTGLLASIGAVAPFVGLFGTVWGIMNAFIGISKANTTNLAVVAPGIAEALLATALGLVA 218
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ + YN + + + + ++ R+
Sbjct: 219 AIPAVVIYNHLSRRIGSYRALLGDASAQLLLLIGREA 255
>gi|301167927|emb|CBW27512.1| TolQ protein [Bacteriovorax marinus SJ]
Length = 230
Score = 174 bits (442), Expect = 8e-42, Method: Composition-based stats.
Identities = 57/226 (25%), Positives = 105/226 (46%), Gaps = 8/226 (3%)
Query: 6 LAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS 65
+ ++ I + + GL VK ++ L + S++SW++I++K L R+F +++ +
Sbjct: 1 MTTGELDIVQIMLDSGLVVKTVLLSLILASVVSWAIILKKKKLIKELEENSRDFLEVYKN 60
Query: 66 GQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRI--------DRMM 117
SL+ + +S ++F + E K D ++ I +R M
Sbjct: 61 STSLKDIMESCHRLSLSPHKSLFTNGYLELSKLKDALGDDKEKLEQHITKHGLQFLERGM 120
Query: 118 DVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIE 177
+ E+ L+ L S+ S VG+ G V G++G F +AG + PGI E
Sbjct: 121 KKGVHEINIELERFLATLASIGSVTPFVGLFGTVWGIIGSFTGLAGGGATLDAVAPGIAE 180
Query: 178 SLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
+L++ +GL +IP+ YNKF ++ +ME F EF ++ R
Sbjct: 181 ALVATAVGLVAAIPAVWFYNKFNNENSHIQSEMESFGQEFLNVVER 226
>gi|192359874|ref|YP_001982789.1| ExbB [Cellvibrio japonicus Ueda107]
gi|190686039|gb|ACE83717.1| ExbB [Cellvibrio japonicus Ueda107]
Length = 243
Score = 174 bits (442), Expect = 9e-42, Method: Composition-based stats.
Identities = 55/206 (26%), Positives = 96/206 (46%), Gaps = 4/206 (1%)
Query: 21 GLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHH 80
AV+ LL FSI++W++I+ K V I + R F + FWS L +L+NH
Sbjct: 6 TFAVELTFWLLIAFSIITWALILIKGVQNILASNRNRRFTRAFWSATDLN-AAAALENHQ 64
Query: 81 NIG--LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSM 138
+A + + S QD ++R + I +E + L+ L S+
Sbjct: 65 GSAAQVAQVGFRTLRSADSSYGLDLEHSWDRQDLLERHLRQQIQKERRSLESGLAVLASI 124
Query: 139 SSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIPSSIAYN 197
+ VG+ G V G++ +I S ++ + G I +L++ G+ V+IPS +AYN
Sbjct: 125 GTTAPFVGLFGTVFGIIEALTAITSNSSASIEVVAGPIGHALVATGFGIAVAIPSVLAYN 184
Query: 198 KFIEDSKKFAMQMEGFANEFSAILSR 223
F+ K A ++ FA +F ++ +
Sbjct: 185 YFLRRLKLIAADLDDFATDFVTLVQK 210
>gi|90422455|ref|YP_530825.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris BisB18]
gi|90104469|gb|ABD86506.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris BisB18]
Length = 283
Score = 174 bits (441), Expect = 9e-42, Method: Composition-based stats.
Identities = 46/216 (21%), Positives = 94/216 (43%), Gaps = 5/216 (2%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
++S + +F + VK ++ L + S+ +W+V + K++ + + L S L
Sbjct: 59 NLSPWGMFQNADIVVKVVMVGLALASLATWTVWLSKTLELRRETERALQRLALLESDTPL 118
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+ + + N +A + +SA E S G ++R+ ++ I
Sbjct: 119 RDIEQDCTDA-NDAVAQLILSASREASLS---GGVFDDAFKERVALRLERVEGAMSRRIA 174
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCV 188
L ++ + +G+ G V G+M F I+ ++ N+ V PGI E+L++ LGL
Sbjct: 175 RGTGILATIGATSPFIGLFGTVWGIMNAFIGISQAHTTNLAVVAPGIAEALLATALGLVA 234
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+IP+ + YN + + + + +LSR
Sbjct: 235 AIPAVVIYNHLARVIAGYRALLGDASAQLLLLLSRD 270
>gi|222112434|ref|YP_002554698.1| mota/tolq/exbb proton channel [Acidovorax ebreus TPSY]
gi|221731878|gb|ACM34698.1| MotA/TolQ/ExbB proton channel [Acidovorax ebreus TPSY]
Length = 222
Score = 174 bits (441), Expect = 9e-42, Method: Composition-based stats.
Identities = 49/204 (24%), Positives = 83/204 (40%), Gaps = 1/204 (0%)
Query: 19 QMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKN 78
Q + LL S+ SW VI K FW SL + L
Sbjct: 9 QGDAVTQASALLLLAMSVASWVVIFWKLRLMRRAHVDVPRSTAAFWQAPSLAAAAERLPA 68
Query: 79 HHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSM 138
GL + A + +++ G+ R+ R++ A+ L ++ L ++
Sbjct: 69 FDREGLVLPLVRAAQQVEQAGAATLAGQGGLSQRLTRVLRDALHGVLGKLQFGQVLLATV 128
Query: 139 SSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIPSSIAYN 197
S VG+LG V G+ ++AG ++ + G + E+LI GL V+IP+ +AYN
Sbjct: 129 GSTAPFVGLLGTVWGIYHALTAMAGAGQISIERVAGPVGEALIMTAAGLTVAIPAVLAYN 188
Query: 198 KFIEDSKKFAMQMEGFANEFSAIL 221
F + +EGFA + ++
Sbjct: 189 WFGRVIGRIEADLEGFARDLRELV 212
>gi|91978465|ref|YP_571124.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris BisB5]
gi|91684921|gb|ABE41223.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris BisB5]
Length = 267
Score = 174 bits (441), Expect = 9e-42, Method: Composition-based stats.
Identities = 49/221 (22%), Positives = 99/221 (44%), Gaps = 6/221 (2%)
Query: 5 GLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFW 64
GL D+S + +F + VK ++T L + S+ +W+V + K++ + R+
Sbjct: 39 GLLPRDLSPWGMFKNADIVVKIVMTGLAVASLATWTVWLSKTIELRHETARARDGLAKLE 98
Query: 65 SGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARE 124
+ +L + + + H +A + +A E S G +DR+ ++ A
Sbjct: 99 ADTTLAELRSADEAHD--AVAQLVQTAAREASLS---GWTFDDDFKDRVGLRLERVEAAM 153
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISIL 183
I L ++ + VG+ G V G+M F I+ ++ N+ V PGI E+L++
Sbjct: 154 SRRIARGTGILATIGAVAPFVGLFGTVWGIMNAFIGISEAHTTNLAVVAPGIAEALLATA 213
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
LGL ++P+ + YN + + + + + ++SR
Sbjct: 214 LGLVAAVPAVVIYNYLVRQIANYRALLGDASAQVLLLVSRD 254
>gi|27382184|ref|NP_773713.1| biopolymer transport protein [Bradyrhizobium japonicum USDA 110]
gi|27355354|dbj|BAC52338.1| biopolymer transport protein [Bradyrhizobium japonicum USDA 110]
Length = 261
Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats.
Identities = 48/223 (21%), Positives = 101/223 (45%), Gaps = 5/223 (2%)
Query: 5 GLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFW 64
L ++S + +F+ + VK ++ L + S+++W+V + K+V + +
Sbjct: 32 ALLPRNLSPWGMFLGADIIVKTVMIGLAVASVVTWTVWLAKTVELRRKSALAVQRTRALE 91
Query: 65 SGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARE 124
L + + H+ +A + S E + S G G+Q+R+ ++ A
Sbjct: 92 GRMKLAEAAERTGDAHD-AVAQLIQSCAKEAELS---GGIVDDGLQERVALRLERVEAAM 147
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISIL 183
+I L ++ + VG+ G V G+M F I+ ++ ++ V PGI E+L++
Sbjct: 148 SRQIARGTGVLATIGATAPFVGLFGTVWGIMNAFIGISESHTTSLAVVAPGIAEALLATA 207
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
LGL +IP+ + YN + + + + + ++SRQ +
Sbjct: 208 LGLVAAIPAVVIYNHLVRGIANYRALLGDASAQLMLLVSRQRD 250
>gi|298370159|ref|ZP_06981475.1| biopolymer transport protein ExbB [Neisseria sp. oral taxon 014
str. F0314]
gi|298281619|gb|EFI23108.1| biopolymer transport protein ExbB [Neisseria sp. oral taxon 014
str. F0314]
Length = 219
Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats.
Identities = 41/219 (18%), Positives = 102/219 (46%), Gaps = 3/219 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+++ +F + + +L I SI++WS+II +++ + ++L + +L
Sbjct: 1 MNLALVFQSGDFVLISVFIILVIMSIVTWSIIILRAIRLRKAKNGNAAVKKLVLASFTLN 60
Query: 71 TVCKSLK--NHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ K + L + A +++S K + + + + + + ++++ + +
Sbjct: 61 EAVQKAKSVDSPMGRLTEEAVKAHQNYRQSDAKLLANALPLNEYLVTQIRNSMSQIMRQF 120
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLC 187
++ L S+ + +G+ G V G+ +I+ ++ ++ G I E+L+S GL
Sbjct: 121 DGGMTSLASIGATAPFIGLFGTVWGIYHALINISQSGQMSIAAVAGPIGEALVSTAAGLF 180
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
V+IP+ +AYN +K + M+ +A++ L Q +
Sbjct: 181 VAIPAVLAYNFLNRSTKTLSQDMDAYAHDLHVRLLNQKD 219
>gi|91785205|ref|YP_560411.1| MotA/TolQ/ExbB proton channel family protein [Burkholderia
xenovorans LB400]
gi|91689159|gb|ABE32359.1| MotA/TolQ/ExbB proton channel family protein [Burkholderia
xenovorans LB400]
Length = 236
Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats.
Identities = 50/220 (22%), Positives = 86/220 (39%), Gaps = 2/220 (0%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
I + +L SI SW +I KS +RQ FW +L
Sbjct: 7 IIHYLQTSDAITHGVAYVLLAMSIASWCFLIVKSWILTRAKRQATRAIAQFWQAPTLSEG 66
Query: 73 CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGAR-SPIGIQDRIDRMMDVAIARELEEITEK 131
+L+ + A + GA + + +R+ R + A+ +
Sbjct: 67 VAALRRADRERVFTPLAEAALHAAEVDIPGALLARVERSERVLRALRQALNASQRRLEFG 126
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSI 190
L S+ S VG+LG V G+ SIA + ++ G + E+LI GL V+I
Sbjct: 127 QVLLASVGSTAPFVGLLGTVWGIYHALGSIAASGQAQIENVAGPVGEALIMTAFGLVVAI 186
Query: 191 PSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
P+ +AYN + + +++GFA++ A + E +
Sbjct: 187 PAVLAYNVLGRLVLQLSEELDGFAHDLHAYVCAPAEQTPA 226
>gi|82702177|ref|YP_411743.1| MotA/TolQ/ExbB proton channel [Nitrosospira multiformis ATCC 25196]
gi|82410242|gb|ABB74351.1| outer membrane transport energization protein ExbB [Nitrosospira
multiformis ATCC 25196]
Length = 254
Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats.
Identities = 52/217 (23%), Positives = 104/217 (47%), Gaps = 5/217 (2%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+ Q+ ++ LL S+ SW +I+ K ++ I ++ F + FWS SL+
Sbjct: 5 LGFSNFLAQLDGVGMTVLILLLALSVASWYLILTKGISNIMAGKRADAFLKRFWSAGSLQ 64
Query: 71 TVCKSLKNHHN----IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
V +LK + LA + M+A ++ +K + + G + I R++ + +E
Sbjct: 65 EVNSTLKEDADDNAFAQLARLAMNAAADSEKHGLQNLAAAGGASEFITRVLRNGLDQEAA 124
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLG 185
++ L+ + S SA +G+ G V G+ I + + G + E+LI LG
Sbjct: 125 QVENGLTVIASAGSAAPYIGLFGTVWGIYHALIQIGLSGQGTLDKVAGPVGEALIMTALG 184
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
L V+IP+ +AYN F ++ + +++ FA++ +++
Sbjct: 185 LAVAIPAVLAYNTFGRRNRIWLARLDAFAHDLFVLIT 221
>gi|296160455|ref|ZP_06843271.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. Ch1-1]
gi|295889204|gb|EFG69006.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. Ch1-1]
Length = 236
Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats.
Identities = 49/211 (23%), Positives = 86/211 (40%), Gaps = 2/211 (0%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
I + +L SI SW +I KS +RQ FW +L
Sbjct: 7 IIHYLQTSDAITHGVAYVLLAMSIASWCFLIVKSWILTRAKRQATRAIAQFWQAPTLSEG 66
Query: 73 CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGAR-SPIGIQDRIDRMMDVAIARELEEITEK 131
+L+ + A + GA + + +R+ R + A++ +
Sbjct: 67 VAALRRTDRERVFTPLAEAALHAAEVDIPGALLARVERGERVLRALRQALSASQRRLEFG 126
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSI 190
L S+ S VG+LG V G+ SIA + ++ G + E+LI GL V+I
Sbjct: 127 QVLLASVGSTAPFVGLLGTVWGIYHALGSIAASGQAQIENVAGPVGEALIMTAFGLVVAI 186
Query: 191 PSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
P+ +AYN ++ + +++GFA++ A +
Sbjct: 187 PAVLAYNVLGRLVRQLSEELDGFAHDLHAYV 217
>gi|49476130|ref|YP_034171.1| biopolymer transport exbB protein [Bartonella henselae str.
Houston-1]
gi|49238938|emb|CAF28234.1| Biopolymer transport exbB protein [Bartonella henselae str.
Houston-1]
Length = 280
Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats.
Identities = 56/255 (21%), Positives = 106/255 (41%), Gaps = 35/255 (13%)
Query: 7 AIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG 66
A D+S F++FM VK +I LL + S+ SW++ K + +R+ R +L S
Sbjct: 16 AAHDLSPFSMFMAADFVVKAVIVLLLLASLASWTIAFVKIIEITLAKRKARHELRLVLSA 75
Query: 67 QSLETVCKSLKNHHNIG-------LAAIFMSA---------------------------M 92
Q+L + SLK+ G L +++S
Sbjct: 76 QTLTRLAASLKDSKGPGVFFFKEMLKEVYLSTQKVNFIATEDSSERQGEQTVVCEDAIPY 135
Query: 93 SEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVL 152
+E + + G+++R+ ++ + + + L ++ + VG+ V
Sbjct: 136 AEIARYGETARGVNEGLKERVHSLLSRCLLAATRRVACGSAVLATIGAIAPFVGLFATVW 195
Query: 153 GMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
G+M F IA + + V PGI E+L++ +GL V+IP+ + YN + + +
Sbjct: 196 GIMNSFIGIAQSQTTRLDVVAPGIAEALLATAIGLFVAIPAVVMYNSLMRALSGYRNDLG 255
Query: 212 GFANEFSAILSRQTE 226
A +LSR+ +
Sbjct: 256 DIAAALERLLSRELD 270
>gi|121596207|ref|YP_988103.1| MotA/TolQ/ExbB proton channel [Acidovorax sp. JS42]
gi|120608287|gb|ABM44027.1| MotA/TolQ/ExbB proton channel [Acidovorax sp. JS42]
Length = 219
Score = 173 bits (440), Expect = 1e-41, Method: Composition-based stats.
Identities = 49/204 (24%), Positives = 83/204 (40%), Gaps = 1/204 (0%)
Query: 19 QMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKN 78
Q + LL S+ SW VI K FW SL + L
Sbjct: 9 QGDAVTQASALLLLAMSVASWVVIFWKLRLMRRAHVDVPRSTAAFWQAPSLAAAAERLPA 68
Query: 79 HHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSM 138
GL + A + +++ G+ R+ R++ A+ L ++ L ++
Sbjct: 69 FDREGLVLPLVRAAQQVEQAGAATLAGQGGLSQRLTRVLRDALHGVLGKLQFGQVLLATV 128
Query: 139 SSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIPSSIAYN 197
S VG+LG V G+ ++AG ++ + G + E+LI GL V+IP+ +AYN
Sbjct: 129 GSTAPFVGLLGTVWGIYHALTAMAGAGQISIERVAGPVGEALIMTAAGLTVAIPAVLAYN 188
Query: 198 KFIEDSKKFAMQMEGFANEFSAIL 221
F + +EGFA + ++
Sbjct: 189 WFGRVIGRIEADLEGFARDLRELV 212
>gi|190575740|ref|YP_001973585.1| putative MotA/TolQ/ExbB proton channel family protein
[Stenotrophomonas maltophilia K279a]
gi|190013662|emb|CAQ47297.1| putative MotA/TolQ/ExbB proton channel family protein
[Stenotrophomonas maltophilia K279a]
Length = 247
Score = 173 bits (440), Expect = 1e-41, Method: Composition-based stats.
Identities = 54/222 (24%), Positives = 97/222 (43%), Gaps = 4/222 (1%)
Query: 6 LAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS 65
+A ++ + +++ + VK ++ L + S+ +W+V++ K RQ R L
Sbjct: 14 VAAPALTPWGMYLAADVVVKAVMIALALASLATWTVLLAKGWELARQARQLRAARALLLQ 73
Query: 66 GQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
L + I LA + +A +E + S D +R GI++RI +D
Sbjct: 74 SAQLPPQSEEASLQQGIALA-MLDAARTELRLSQDLDSRD--GIKERIASRLDRIELETA 130
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILL 184
+ L S+ + VG+ G V G+M F IA + N+ V PGI E+L++ L
Sbjct: 131 RVQRRGIGVLASIGAVAPFVGLFGTVWGIMNSFIGIAHSNTTNLAVVAPGIAEALLATAL 190
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
GL +IP+ + YN F + + ++SR +
Sbjct: 191 GLVAAIPAVLVYNHFSRVLAGLRGLLGDLSAAVQQLVSRDLD 232
>gi|255067246|ref|ZP_05319101.1| TonB system transport protein ExbB [Neisseria sicca ATCC 29256]
gi|255048614|gb|EET44078.1| TonB system transport protein ExbB [Neisseria sicca ATCC 29256]
Length = 219
Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats.
Identities = 41/219 (18%), Positives = 98/219 (44%), Gaps = 3/219 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+ + +F + + L+ + SI++W +II +S+ + + + +L
Sbjct: 1 MDLKTIFESGDFVLISVFVLMLVMSIVTWCLIILRSIKLKKAKTANALVKTQMLNAFTLT 60
Query: 71 TVCKSLKN--HHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ +K+ +A + A +++S K + + + + + + ++ + + +
Sbjct: 61 EAVQKVKDIDAPMSRVADESLRAYQSYRQSNAKTLTTELPLNEYLVIQIRNSMEQNMRQF 120
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLC 187
++ L S+ S +G+ G V G+ +I ++ ++ G I E+L+S +GL
Sbjct: 121 DYGMTALASIGSTAPFIGLFGTVWGIYHALINIGQSGQMSIAAVAGPIGEALVSTAIGLF 180
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
V+IP+ +AYN K + M+ FA++ L Q +
Sbjct: 181 VAIPAVLAYNFLNRGKKTLSQDMDAFAHDLHVRLLNQKD 219
>gi|261365668|ref|ZP_05978551.1| TonB system transport protein ExbB [Neisseria mucosa ATCC 25996]
gi|288565834|gb|EFC87394.1| TonB system transport protein ExbB [Neisseria mucosa ATCC 25996]
Length = 219
Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats.
Identities = 42/221 (19%), Positives = 100/221 (45%), Gaps = 5/221 (2%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
MD+ + +F + + L+ + SI++W +II +++ + E + + +
Sbjct: 1 MDLKL--VFESGDFVLISVFVLMLLMSIVTWCLIILRTIKLKKAKSANAEVKTQMLNAFT 58
Query: 69 LETVCKSLK--NHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
L + +K + +A + A +++S K + + + + + + ++ + +
Sbjct: 59 LSEAVQKVKSIDSPMSRVADESLRAYQSYRQSNAKTLTTELPLNEYLVIQIRNSMEQAMR 118
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLG 185
+ ++ L S+ + +G+ G V G+ +I ++ ++ G I E+L+S G
Sbjct: 119 QFDYGMTALASIGATAPFIGLFGTVWGIYHALINIGQSGQMSIAAVAGPIGEALVSTAAG 178
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
L V+IP+ +AYN K + M+ FA++ L Q +
Sbjct: 179 LFVAIPAVLAYNFLNRGKKTLSQDMDAFAHDLHVRLLNQKD 219
>gi|262368604|ref|ZP_06061933.1| TolQ protein [Acinetobacter johnsonii SH046]
gi|262316282|gb|EEY97320.1| TolQ protein [Acinetobacter johnsonii SH046]
Length = 232
Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats.
Identities = 54/194 (27%), Positives = 99/194 (51%), Gaps = 3/194 (1%)
Query: 37 LSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLK-NHHNIGLAAIFMSAMSEW 95
SW +I + +++ + F+++FWSG L T+ + + N +GL IF + E+
Sbjct: 35 FSWYLIAKLHMSYKKAQADDDHFQKIFWSGAELNTLYNNAQLNSKRVGLEDIFYQGLGEF 94
Query: 96 KKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMM 155
K + A +P + +R++ V ++R+ ++ + L L S+ S VG+ G V G+M
Sbjct: 95 LKLKKRNA-APAQTIEGTERILRVGLSRDQSQLEQGLGALASIGSVAPYVGLFGTVWGIM 153
Query: 156 GFFQSIAGYYSNNVVSI-PGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFA 214
F +A + ++ PGI E+LI+ +GL +IP+ +A+N + + FA
Sbjct: 154 NAFIGLADVDQVTLATVAPGIAEALIATAIGLFAAIPAVLAFNHYTGKGETVYSDRALFA 213
Query: 215 NEFSAILSRQTEGN 228
E A+L RQ+ G
Sbjct: 214 EEMVALLQRQSLGE 227
>gi|329848727|ref|ZP_08263755.1| protein TolQ [Asticcacaulis biprosthecum C19]
gi|328843790|gb|EGF93359.1| protein TolQ [Asticcacaulis biprosthecum C19]
Length = 234
Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats.
Identities = 62/222 (27%), Positives = 114/222 (51%), Gaps = 3/222 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+ LFM L VK ++ +L S+ SW++I+QKS++ + ++ FE SG++L+
Sbjct: 11 LDFIDLFMNADLVVKVVMIVLVFSSLWSWAIIVQKSLSLGKINKEADTFESALGSGRALD 70
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIG--IQDRIDRMMDVAIARELEEI 128
+ +L H + ++ S W+ K G + ++DR M + E + +
Sbjct: 71 DIAAALGPHPKEPFQKLLVTVTSAWRDYKGKPMNPTQGELLMAQVDREMSHIVTSEADSV 130
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLC 187
+ LS L +++A +G+ G V G+M F +IA N+ ++ P I E+L + +GL
Sbjct: 131 EDGLSILAVIATATPFLGLFGTVWGIMNAFSAIAAQGDTNLATVAPAISEALFATAMGLF 190
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNI 229
+IP+ +A+N F +FA +ME FA+E L+R+ +
Sbjct: 191 AAIPAYVAFNLFNAKVSRFASRMESFADELMVSLTRRLGEKL 232
>gi|154174874|ref|YP_001407645.1| biopolymer transport ExbB protein [Campylobacter curvus 525.92]
gi|112802306|gb|EAT99650.1| biopolymer transport ExbB protein [Campylobacter curvus 525.92]
Length = 251
Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats.
Identities = 57/223 (25%), Positives = 104/223 (46%), Gaps = 8/223 (3%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
+++S ++L+ + VKC+I +L FS+L+WSV I K + + R + E + +
Sbjct: 32 VELSFYSLYSNADMVVKCVIYILVFFSVLTWSVFICKFIEYFLAFRTLKGDENSVRNLSN 91
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
L + K K L + E A +Q+RI +++ I + L +
Sbjct: 92 LNDLSKFKKQSFAKRL-------IKEINLETSACASYNANVQNRIKERLEIEILKILSSL 144
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
+ L S+ S+ +G+ G V G+M F IA + ++ + PGI E+L + GL
Sbjct: 145 KSYVWLLASIGSSSPFIGLFGTVWGIMNSFIGIANANNASLNIVAPGIAEALFATAFGLM 204
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
+IP+ + YN FI+ + KF+ ++ A + R E +
Sbjct: 205 AAIPAVLFYNYFIQKNAKFSNKLNELATTIYILSDRLNEAKNA 247
>gi|124268903|ref|YP_001022907.1| MotA/TolQ/ExbB proton channel family protein [Methylibium
petroleiphilum PM1]
gi|124261678|gb|ABM96672.1| MotA/TolQ/ExbB proton channel family protein [Methylibium
petroleiphilum PM1]
Length = 247
Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats.
Identities = 49/217 (22%), Positives = 95/217 (43%), Gaps = 5/217 (2%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+ Q K ++ +L + S +SW++I+ K + + R+ +F FW+ +SL+
Sbjct: 1 MGFAHFIAQSDFVGKSLLAVLVVMSAISWTLIVVKGLGQLLRTRRSEKFLLFFWNARSLD 60
Query: 71 TVCKSLKNH----HNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
V + H L A ++A + + QD + R + + E
Sbjct: 61 EVGAEIGTHGVQEPFAHLTAHAINAQAHHARYGAAKLEEAGTAQDFVTRTIKKVLDEETT 120
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLG 185
+ L++L ++ + VG+ G V G+ +I S + + G + E+LI +G
Sbjct: 121 RLENGLTWLATIGATAPFVGLFGTVWGVYHALVAIGMSGSGTLDKVAGPVGEALIMTGIG 180
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
L V+IP+ +AYN ++ +++ FA E LS
Sbjct: 181 LAVAIPAVMAYNAITRSNRVLNAKLDAFAFELMTFLS 217
>gi|330960511|gb|EGH60771.1| TonB system transport protein ExbB [Pseudomonas syringae pv.
maculicola str. ES4326]
Length = 228
Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats.
Identities = 48/207 (23%), Positives = 92/207 (44%), Gaps = 4/207 (1%)
Query: 21 GLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHH 80
L + + +L +FS+ +W+V++ K+ L+ Q + + + FW+ Q +T +S
Sbjct: 7 TLIQQSSMGILLLFSLATWAVLLLKAWQQGRLKSQNKRYTEAFWAAQDFDTALRSAPQKS 66
Query: 81 NIGLAAIFMSAMSEWKKSCDKGA-RSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMS 139
LA + S D Q+ ++R + I E + + L S+
Sbjct: 67 Q--LARLAQVTTKALSSSQDGHEPVDSWSRQELLERSLHQQIHCERRSLESGMIVLASIG 124
Query: 140 SAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIPSSIAYNK 198
S +G+ G V G++ Q+I+ S ++ + G I E+LI+ +G+ V++P+ +AYN
Sbjct: 125 STAPFIGLFGTVFGIIHALQAISTAKSASIAVVAGPIGEALIATGIGIAVAVPAVLAYNF 184
Query: 199 FIEDSKKFAMQMEGFANEFSAILSRQT 225
K M+ FA + R
Sbjct: 185 CGRRLKLMVADMDAFAVDLLNRAQRHA 211
>gi|86748366|ref|YP_484862.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris HaA2]
gi|86571394|gb|ABD05951.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris HaA2]
Length = 266
Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats.
Identities = 43/216 (19%), Positives = 94/216 (43%), Gaps = 6/216 (2%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S + +F + V+ ++ L + S+ +W+V + K++ + R+ + +L
Sbjct: 43 DLSPWGMFTSADIVVQVVMAGLVVASLATWTVWLSKTLELRRETARARDGLARLEADVTL 102
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+ + +A + +A E S G ++R+ ++ A I
Sbjct: 103 AEL--RSADEAQDAVAQLVQTAAREASLS---GWSFDDEFKERVALRLERVEAAMSRRIA 157
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCV 188
L ++ + VG+ G V G+M F I+ ++ N+ V PGI E+L++ LGL
Sbjct: 158 RGTGILATIGAVAPFVGLFGTVWGIMNAFIGISEAHTTNLAVVAPGIAEALLATALGLVA 217
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
++P+ + YN + + + + + ++SR
Sbjct: 218 AVPAVVIYNYLVRGIANYRALLGDASAQVLLLVSRD 253
>gi|194367082|ref|YP_002029692.1| tonB-system energizer ExbB [Stenotrophomonas maltophilia R551-3]
gi|194349886|gb|ACF53009.1| tonB-system energizer ExbB [Stenotrophomonas maltophilia R551-3]
Length = 242
Score = 173 bits (438), Expect = 2e-41, Method: Composition-based stats.
Identities = 50/222 (22%), Positives = 95/222 (42%), Gaps = 4/222 (1%)
Query: 6 LAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS 65
+A ++ + +++ + VK ++ L + S+ +W+V++ K RQ R L
Sbjct: 9 VAAPALTPWGMYLAADVVVKTVMIALALASLATWTVLLAKGWELARQARQLRAARALLLQ 68
Query: 66 GQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
SL + LA + +A +E + S + +R G ++R+ +
Sbjct: 69 APSLPSESADASVQQGTALA-MLDAARTELRLSQELDSRD--GTKERVASRLGRIELETA 125
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILL 184
+ L S+ + VG+ G V G+M F IA + N+ V PGI E+L++ L
Sbjct: 126 RVQRRGIGVLASIGAVAPFVGLFGTVWGIMNSFIGIAHSNTTNLAVVAPGIAEALLATAL 185
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
GL +IP+ + YN F + + ++SR +
Sbjct: 186 GLVAAIPAVLVYNHFSRVLAGLCGLLGDLSAAVQQLVSRDLD 227
>gi|91775912|ref|YP_545668.1| MotA/TolQ/ExbB proton channel [Methylobacillus flagellatus KT]
gi|91709899|gb|ABE49827.1| outer membrane transport energization protein ExbB [Methylobacillus
flagellatus KT]
Length = 244
Score = 173 bits (438), Expect = 2e-41, Method: Composition-based stats.
Identities = 46/209 (22%), Positives = 94/209 (44%), Gaps = 7/209 (3%)
Query: 21 GLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHH 80
L V ++ L FS+++W++++ K Q + +++ FWS ++ +
Sbjct: 9 SLIVDGVLYALIAFSVVTWTLLLVKGYQHWRAASQTKRYKKAFWSAPNIIAASEI--QDV 66
Query: 81 NIGLAAIFMSAMSEWKKSCDKGARSPIGIQDR---IDRMMDVAIARELEEITEKLSFLGS 137
+ A + + + + + DR ++R + I +E + L+ L S
Sbjct: 67 DGPAARVAQAGFNTLRDIDSHASHDLEHTGDRQDLLERSLRQQILKERRSLDSGLAVLAS 126
Query: 138 MSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIPSSIAY 196
+ S VG+ G V G+M +I S ++ + G I E+L++ LG+ V++P+ +A+
Sbjct: 127 IGSTSPFVGLFGTVWGIMNALTNIGALGSASLEVVAGPIGEALVATGLGIAVAVPAVLAF 186
Query: 197 NKFIEDSKKFAMQMEGFANEFSAILSRQT 225
N F K ++ FA + LSR+
Sbjct: 187 NFFTRRLKLINGDLDDFAADLI-RLSRKA 214
>gi|296113197|ref|YP_003627135.1| MotA/TolQ/ExbB proton channel [Moraxella catarrhalis RH4]
gi|295920891|gb|ADG61242.1| MotA/TolQ/ExbB proton channel [Moraxella catarrhalis RH4]
Length = 229
Score = 173 bits (438), Expect = 2e-41, Method: Composition-based stats.
Identities = 51/212 (24%), Positives = 93/212 (43%), Gaps = 1/212 (0%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
IS+ +L ++ + VK ++ +L + S +SW +I + + FE+ FW+
Sbjct: 5 ISLISLVIEASVVVKLVMAILLLLSTISWVLIFHLGTKIGGIAKFDERFERWFWTDDIDH 64
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
+ GL IF + + + S ++R + +A+ E + +
Sbjct: 65 QLSVVQAESERAGLELIFYTGFYDQNHQDQDSSLSDDKKVQIVERRLRMALGSEQVHLEK 124
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCVS 189
LS L ++ S +G+ G V G+M F + S + ++ P I E+LI+ LGL V+
Sbjct: 125 GLSTLATIGSVSPYIGLFGTVWGIMNAFIGLGQAESVGLATVAPSIAEALIATALGLFVA 184
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
IP+++AYN F S F + L
Sbjct: 185 IPATMAYNHFATKSNTLYENRSLFCEGLISAL 216
>gi|323527346|ref|YP_004229499.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. CCGE1001]
gi|323384348|gb|ADX56439.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. CCGE1001]
Length = 237
Score = 172 bits (437), Expect = 3e-41, Method: Composition-based stats.
Identities = 51/211 (24%), Positives = 87/211 (41%), Gaps = 2/211 (0%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
I + +L SI SW +I KS + +RQ FW +L
Sbjct: 5 IIHYLQTSDAITHGVAYVLLAMSIASWCFLIVKSWVLLRAKRQGARAVARFWQAPTLAEG 64
Query: 73 CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGAR-SPIGIQDRIDRMMDVAIARELEEITEK 131
+LK + A A + GA + + +R+ R + A+ +
Sbjct: 65 VAALKRADRERVFAPLAEAALHAAEVDIPGALLARVERGERVLRALRQALNASQRRLEFG 124
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSI 190
L S+ S VG+LG V G+ SIA + ++ G + E+LI GL V+I
Sbjct: 125 QVLLASVGSTAPFVGLLGTVWGIYHALGSIAASGQAQIENVAGPVGEALIMTAFGLVVAI 184
Query: 191 PSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
P+ +AYN ++ + +++GFA++ A +
Sbjct: 185 PAVLAYNVLGRLVRQLSEELDGFAHDLHAYV 215
>gi|326559276|gb|EGE09704.1| MotA/TolQ/ExbB proton channel [Moraxella catarrhalis 103P14B1]
gi|326564930|gb|EGE15132.1| MotA/TolQ/ExbB proton channel [Moraxella catarrhalis 46P47B1]
gi|326566620|gb|EGE16762.1| MotA/TolQ/ExbB proton channel [Moraxella catarrhalis BC1]
gi|326567860|gb|EGE17961.1| MotA/TolQ/ExbB proton channel [Moraxella catarrhalis 12P80B1]
gi|326571035|gb|EGE21059.1| MotA/TolQ/ExbB proton channel [Moraxella catarrhalis BC7]
gi|326573332|gb|EGE23300.1| MotA/TolQ/ExbB proton channel [Moraxella catarrhalis 101P30B1]
gi|326575770|gb|EGE25693.1| MotA/TolQ/ExbB proton channel [Moraxella catarrhalis CO72]
gi|326576852|gb|EGE26758.1| MotA/TolQ/ExbB proton channel [Moraxella catarrhalis O35E]
Length = 229
Score = 172 bits (437), Expect = 3e-41, Method: Composition-based stats.
Identities = 50/212 (23%), Positives = 93/212 (43%), Gaps = 1/212 (0%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
IS+ +L ++ + VK ++ +L + S +SW +I + + + FE+ FW+
Sbjct: 5 ISLISLVIEASVVVKLVMAILLLLSTISWVLIFHLGTKIGGIAKFDKRFERWFWTDDIDH 64
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
+ GL IF + + + S ++R + +A+ E + +
Sbjct: 65 QLSVVQAESERAGLELIFYTGFYDQNHQDQDSSLSDDKKVQIVERRLRMALGSEQVHLEK 124
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCVS 189
LS L ++ S +G+ G V G+M F + S + ++ P I E+LI+ LGL +
Sbjct: 125 GLSTLATIGSVSPYIGLFGTVWGIMNAFIGLGQAESVGLATVAPSIAEALIATALGLFAA 184
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
IP+++AYN F S F + L
Sbjct: 185 IPATMAYNHFATKSNTLYENRSLFCEGLISAL 216
>gi|78063451|ref|YP_373359.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. 383]
gi|77971336|gb|ABB12715.1| outer membrane transport energization protein ExbB [Burkholderia
sp. 383]
Length = 238
Score = 172 bits (437), Expect = 3e-41, Method: Composition-based stats.
Identities = 48/205 (23%), Positives = 94/205 (45%), Gaps = 2/205 (0%)
Query: 21 GLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHH 80
V+ + LL +FS+++W++I+ K++ + + R + FW+ S +
Sbjct: 7 TFIVQGALWLLVVFSVVTWTLIVVKAIQSLRASVRNRRYVSAFWAANSFHEAAALDGANS 66
Query: 81 NIG-LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMS 139
+G LAA A+ +S D ++R + I L+ L S+
Sbjct: 67 PVGELAATGFDALRRADESNAHDLEHSWSRHDLLERHLRQQIHNARRREEAGLAVLASIG 126
Query: 140 SAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIPSSIAYNK 198
S VG+ G V G++ +I S ++ + G I E+L++ +G+ V++P+ +AYN
Sbjct: 127 STAPFVGLFGTVFGIIHALTAITHSASASIDVVAGPIGEALVATGIGIAVAVPAVLAYNF 186
Query: 199 FIEDSKKFAMQMEGFANEFSAILSR 223
F+ K + ++ FA +F + R
Sbjct: 187 FVRRVKAASADLDAFATDFVTLAQR 211
>gi|91788912|ref|YP_549864.1| MotA/TolQ/ExbB proton channel [Polaromonas sp. JS666]
gi|91698137|gb|ABE44966.1| outer membrane transport energization protein ExbB [Polaromonas sp.
JS666]
Length = 238
Score = 172 bits (436), Expect = 4e-41, Method: Composition-based stats.
Identities = 48/214 (22%), Positives = 85/214 (39%), Gaps = 4/214 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+ ++ Q + K + LL S+ SW VII K+++ I ++ R E FW +
Sbjct: 5 FGLANVWSQGDIVTKSVALLLLAMSLASWMVIIIKTLDLIKYKKIARAAED-FWHSEDFA 63
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSE--WKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
L + + ++ + + D + R + I +
Sbjct: 64 AGLTKLGADPTNPFRQLALEGREATLHHRNTKAHLHDALDVSDWVTRTLRNTIDEFTARL 123
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLC 187
L+ L S+ S +G+ G V G+ SI + + G I ESLI LGL
Sbjct: 124 QSGLAVLASVGSTAPFIGLFGTVWGIYHALLSIGAAGQATIDKVAGPIGESLIMTALGLA 183
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
V+IP+ + YN + +K ++ FA++ A
Sbjct: 184 VAIPAVLGYNALVRGNKGILQKLSRFAHDLHAYF 217
>gi|94987137|ref|YP_595070.1| biopolymer transport proteins [Lawsonia intracellularis PHE/MN1-00]
gi|94731386|emb|CAJ54749.1| Biopolymer transport proteins [Lawsonia intracellularis PHE/MN1-00]
Length = 225
Score = 172 bits (436), Expect = 4e-41, Method: Composition-based stats.
Identities = 55/224 (24%), Positives = 110/224 (49%), Gaps = 2/224 (0%)
Query: 6 LAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS 65
+ MD+SI +L Q + + ++ +L + S+LSW+++ QK + ++ + F
Sbjct: 1 MNRMDLSIISLIAQATVVGQVVLLILLLMSVLSWAMMFQKWIAIRLAMKKTVLGSERFHD 60
Query: 66 GQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
+ L S+ L + ++E+ +S + G S I + + R + ++ E+
Sbjct: 61 ARELRNAVHSIGRDMVSPLYVVAHEGVTEFNRSKEAG-NSEEVIVENVRRALRQGVSTEM 119
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILL 184
++ LSFL + ++ +G+ G + G+M F SI S ++ ++ PGI E+LI+
Sbjct: 120 TRLSSSLSFLATTANTAPFIGLFGTIWGIMHTFHSIGAMKSASLATVAPGISEALIATAF 179
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
GL V+IP+++ YN F+ ++ FA F + R+ N
Sbjct: 180 GLAVAIPATVGYNIFVGKLGDLESKLVNFAGMFLNRVHRELNAN 223
>gi|307730981|ref|YP_003908205.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. CCGE1003]
gi|307585516|gb|ADN58914.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. CCGE1003]
Length = 239
Score = 171 bits (435), Expect = 5e-41, Method: Composition-based stats.
Identities = 51/211 (24%), Positives = 87/211 (41%), Gaps = 2/211 (0%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
I + +L SI SW +I KS + +RQ FW +L
Sbjct: 7 IIHYLQTSDAITHGVAYVLLAMSIASWCFLIVKSWVLVRAKRQGARAVARFWQAPTLAEG 66
Query: 73 CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGAR-SPIGIQDRIDRMMDVAIARELEEITEK 131
L + A A + + GA + + +R+ R + A++ +
Sbjct: 67 VAGLTRADRERVFAPLAEAALQAAEVDIPGALLARVERNERVLRALRQALSASQRRLEFG 126
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSI 190
L S+ S VG+LG V G+ SIA + S+ G + E+LI GL V+I
Sbjct: 127 QVLLASVGSTAPFVGLLGTVWGIYHALGSIAASGQAQIESVAGPVGEALIMTAFGLVVAI 186
Query: 191 PSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
P+ +AYN ++ + +++GFA++ A +
Sbjct: 187 PAVLAYNVLGRLVRQLSEELDGFAHDLHAYV 217
>gi|120613185|ref|YP_972863.1| MotA/TolQ/ExbB proton channel [Acidovorax citrulli AAC00-1]
gi|120591649|gb|ABM35089.1| MotA/TolQ/ExbB proton channel [Acidovorax citrulli AAC00-1]
Length = 222
Score = 171 bits (435), Expect = 5e-41, Method: Composition-based stats.
Identities = 51/213 (23%), Positives = 95/213 (44%), Gaps = 2/213 (0%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
++ + + Q + + LL SI SW VI+ K+ FWS +L
Sbjct: 1 MNAWHWWHQGDMVTRISALLLLSMSIASWVVILWKARLLRRAVAGVERSTAEFWSSPTLA 60
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQ-DRIDRMMDVAIARELEEIT 129
+ + L GL + A + + G+ + G + ++ R++ A+ R L +
Sbjct: 61 SARERLVPADPDGLLRPLVDAATGVADNAHAGSLAASGQRSQQLTRVLRDALHRVLARLE 120
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCV 188
L ++ S VG+LG V G+ ++AG + ++ + G + E+L+ GL V
Sbjct: 121 FGQVLLATVGSTAPFVGLLGTVWGIYHALTALAGGGAVSIDRVAGPVGEALVMTAAGLAV 180
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+IP+ +AYN F + ++EGFA + +L
Sbjct: 181 AIPAVLAYNLFGRWIGRVEAELEGFALDLRELL 213
>gi|251772670|gb|EES53234.1| MotA/TolQ/ExbB proton channel [Leptospirillum ferrodiazotrophum]
Length = 223
Score = 171 bits (435), Expect = 5e-41, Method: Composition-based stats.
Identities = 51/218 (23%), Positives = 93/218 (42%), Gaps = 5/218 (2%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+++F Q+ L + ++ L S LSW VI K + R F + F
Sbjct: 1 MNLFNFINQISLLAEIVLGFLIFLSSLSWGVIFYKWYAISKTNAENRGFIKAFKKADRFS 60
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWK----KSCDKGARSPIGIQDRIDRMMDVAIARELE 126
+ + LA +F SA + K ++ +G + I R + A +L
Sbjct: 61 RLYQDAGEFRRSTLAFMFRSAYEKIKGIEERAVSRGGEVRESEIEIIHRTLLQARQEDLT 120
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV-SIPGIIESLISILLG 185
+ L L + ++ VG+ G V G++ F+ I+ S ++ PGI ++L++ G
Sbjct: 121 RLESYLQILATTANISPFVGLFGTVWGIIHAFRDISHQSSVSIASVAPGIADALVTTASG 180
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
L +IP+ IAYN F++ + E F E +++
Sbjct: 181 LFAAIPAVIAYNYFLQRIRSIESLAESFNMELLNLMAE 218
>gi|319944465|ref|ZP_08018739.1| TonB family auxiliary protein ExbB [Lautropia mirabilis ATCC 51599]
gi|319742426|gb|EFV94839.1| TonB family auxiliary protein ExbB [Lautropia mirabilis ATCC 51599]
Length = 244
Score = 171 bits (435), Expect = 6e-41, Method: Composition-based stats.
Identities = 46/218 (21%), Positives = 93/218 (42%), Gaps = 6/218 (2%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+ Q K ++ +L S++SW++I+ K + + F ++FW S++
Sbjct: 7 LGFAHFLAQGDFVSKALLVILLGMSVVSWTLILVKGITHFIRSSRAERFLKMFWEAPSMQ 66
Query: 71 TVCKSLKNH----HNIGLAAIFMSAMSEWKKSCDKGARSPIGI-QDRIDRMMDVAIAREL 125
V K + H + A + A+ + ++ + G D + R + + E
Sbjct: 67 AVAKDIAAHGVHDPFSRVTANALQAIQHYARTAPSNRMADAGTAADLLTRTIKKVLDEET 126
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILL 184
+ LS L ++ + G+ G V G+ +I S ++ + G + E+LI L
Sbjct: 127 VRLENGLSVLATVGATAPFFGLFGTVWGVYHALVNIGLSGSGSLDKVAGPVGEALIMTGL 186
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
GL V++P+ I +N ++ +++ FA E LS
Sbjct: 187 GLAVALPAVIGFNWLTRRNRVLTARLDAFAFELFTFLS 224
>gi|326560191|gb|EGE10579.1| MotA/TolQ/ExbB proton channel [Moraxella catarrhalis 7169]
gi|326570298|gb|EGE20343.1| MotA/TolQ/ExbB proton channel [Moraxella catarrhalis BC8]
Length = 229
Score = 171 bits (434), Expect = 7e-41, Method: Composition-based stats.
Identities = 50/212 (23%), Positives = 92/212 (43%), Gaps = 1/212 (0%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
IS+ +L ++ + VK ++ +L + S +SW +I + + FE+ FW+
Sbjct: 5 ISLISLVIEASVVVKLVMAILLLLSTISWVLIFHLGTKIGGIAKFDERFERWFWTDDIDH 64
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
+ GL IF + + + S ++R + +A+ E + +
Sbjct: 65 QLSVVQAESERAGLELIFYTGFYDQNHQDQDSSLSDDKKVQIVERRLRMALGSEQVHLEK 124
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCVS 189
LS L ++ S +G+ G V G+M F + S + ++ P I E+LI+ LGL +
Sbjct: 125 GLSTLATIGSVSPYIGLFGTVWGIMNAFIGLGQAESVGLATVAPSIAEALIATALGLFAA 184
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
IP+++AYN F S F + L
Sbjct: 185 IPATMAYNHFATKSNTLYENRSLFCEGLISAL 216
>gi|329902500|ref|ZP_08273130.1| MotA/TolQ/ExbB proton channel family protein [Oxalobacteraceae
bacterium IMCC9480]
gi|327548761|gb|EGF33399.1| MotA/TolQ/ExbB proton channel family protein [Oxalobacteraceae
bacterium IMCC9480]
Length = 298
Score = 171 bits (434), Expect = 7e-41, Method: Composition-based stats.
Identities = 49/221 (22%), Positives = 97/221 (43%), Gaps = 11/221 (4%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YGL AL+ + + + +L + S+ SW VII K ++ + L Q E +
Sbjct: 76 NPYGLD-------ALWKGGDIVARGTLVILVLMSMSSWYVIITKLIDQVKLGGQAAEAGK 128
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
FW ++++ SLK A +E K + I + + + A+
Sbjct: 129 KFWDAKTVDAGTASLKEGSPFRFIAETGIKSTEHK---EGALLEHIDLNTWVTMSIQRAV 185
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLI 180
+ + + L+ L ++ S VG+ G V G+ +I ++ + G + E+LI
Sbjct: 186 EKVQSRLQDGLALLATVGSTAPFVGLFGTVWGIYNALTAIGIAGQASIDKVAGPVGEALI 245
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+GL V++P+ + YN + +K + F+++ ++L
Sbjct: 246 MTAIGLGVAVPAVLGYNFLVRRNKTAMENVRTFSSDLHSVL 286
>gi|126641650|ref|YP_001084634.1| biopolymer transport proteins [Acinetobacter baumannii ATCC 17978]
gi|332851774|ref|ZP_08433699.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Acinetobacter baumannii 6013150]
gi|332865846|ref|ZP_08436630.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Acinetobacter baumannii 6013113]
gi|332874410|ref|ZP_08442313.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Acinetobacter baumannii 6014059]
gi|332729781|gb|EGJ61116.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Acinetobacter baumannii 6013150]
gi|332735058|gb|EGJ66143.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Acinetobacter baumannii 6013113]
gi|332737254|gb|EGJ68178.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Acinetobacter baumannii 6014059]
Length = 202
Score = 171 bits (434), Expect = 7e-41, Method: Composition-based stats.
Identities = 45/189 (23%), Positives = 82/189 (43%), Gaps = 4/189 (2%)
Query: 34 FSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMS 93
SI +W +II K + ++RQ +E E+ FW SL+ + L+ I ++
Sbjct: 1 MSIGTWYIIISKLLQQGKVKRQGKEAEKHFWEATSLDNAAEGLEQSSAYRF--IAEKGIN 58
Query: 94 EWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLG 153
KS I + + AI + + L+FL ++ S VG+ G V G
Sbjct: 59 S-TKSHGGSLLERIDFNTWVSISIQRAIEKVQNHLGGGLAFLATVGSTAPFVGLFGTVWG 117
Query: 154 MMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEG 212
+ +I ++ + G + E+LI +GL V++P+ + YN +K +
Sbjct: 118 IYHALTAIGISGQASIDKVAGPVGEALIMTAIGLAVAVPAVLGYNWLTRRNKAVMENVRS 177
Query: 213 FANEFSAIL 221
F ++ A+L
Sbjct: 178 FGSDLHAVL 186
>gi|171322985|ref|ZP_02911656.1| MotA/TolQ/ExbB proton channel [Burkholderia ambifaria MEX-5]
gi|171091638|gb|EDT37214.1| MotA/TolQ/ExbB proton channel [Burkholderia ambifaria MEX-5]
Length = 222
Score = 171 bits (433), Expect = 8e-41, Method: Composition-based stats.
Identities = 48/214 (22%), Positives = 86/214 (40%), Gaps = 2/214 (0%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
+ + +L S+ SW ++ K+ + +RQ FW SL+
Sbjct: 7 VVHYLESGDAITHAVAYVLLAMSVASWCFLLMKAWLLVRAKRQGPRALAAFWRAASLDAG 66
Query: 73 CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSP-IGIQDRIDRMMDVAIARELEEITEK 131
+L + A + D A + + +R+ R + A+ R +
Sbjct: 67 IDALAGADRERVFVPLAEAARDAADQHDPAALAARVERSERVLRALRHAMLRSQRRLEFG 126
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSI 190
L S+ S VG+LG V G+ SIA + ++ G + E+LI GL V+I
Sbjct: 127 QVLLASIGSTAPFVGLLGTVWGIYHALGSIAASGQAQIENVAGPVGEALIMTAFGLVVAI 186
Query: 191 PSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
P+ +AYN ++ A +++GFA + + Q
Sbjct: 187 PAVLAYNILGRLVRQLAEELDGFARDLHVFVCAQ 220
>gi|316934721|ref|YP_004109703.1| tonB-system energizer ExbB [Rhodopseudomonas palustris DX-1]
gi|315602435|gb|ADU44970.1| tonB-system energizer ExbB [Rhodopseudomonas palustris DX-1]
Length = 266
Score = 170 bits (432), Expect = 1e-40, Method: Composition-based stats.
Identities = 49/217 (22%), Positives = 91/217 (41%), Gaps = 5/217 (2%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S + +F+ VK ++ L S+ +W+V + KS+ R S +L
Sbjct: 43 DLSPWGMFVNADAVVKTVMVGLAAASLAAWTVWLAKSIELRRSVALARAGLDRLESDTTL 102
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+ + H+ +A + + E S G G +DR+ ++ A E
Sbjct: 103 QQAAADTADQHD-AVAQMIHTVEREASLS---GGVHDDGFRDRVALRLERVEAAEARRAA 158
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCV 188
L S+ + VG+ G V G+M F I+ + N+ V PGI E+L++ LGL
Sbjct: 159 IGTGLLASIGAVAPFVGLFGTVWGIMNAFIGISKANTTNLAVVAPGIAEALLATALGLVA 218
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ + YN + + + + ++ R+
Sbjct: 219 AIPAVVIYNHLTRRVSAYRALLGDASAQLLLMIGREA 255
>gi|307294040|ref|ZP_07573884.1| MotA/TolQ/ExbB proton channel [Sphingobium chlorophenolicum L-1]
gi|306880191|gb|EFN11408.1| MotA/TolQ/ExbB proton channel [Sphingobium chlorophenolicum L-1]
Length = 252
Score = 170 bits (432), Expect = 1e-40, Method: Composition-based stats.
Identities = 46/221 (20%), Positives = 89/221 (40%), Gaps = 12/221 (5%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YGL Q G + +L S+ ++ ++ K + + Q ++
Sbjct: 15 NPYGL-------MEALEQGGTIAWTVFIILCGMSVGTFYILFTKLIEQQKVINQGKKVRA 67
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
FW +L+ L+ N I + ++ P+ D + + +
Sbjct: 68 TFWRAANLKEGTAKLE--KNSAYKQIVDDGIKAQEEHTK--LTDPVEAHDWLHGSLARSE 123
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLI 180
A ++ L+FL ++ S +G+ G V+G+ I ++ ++ G + E+LI
Sbjct: 124 ASINSKLNGGLAFLATVGSTSPFIGLFGTVIGIYRALIKIGAAGQASIDAVAGPVGEALI 183
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
LGL V++P+ +AYN +K Q+ GF + A L
Sbjct: 184 MTALGLAVAVPAVLAYNFLQRRNKSIQEQLSGFTVDLLAYL 224
>gi|134294732|ref|YP_001118467.1| MotA/TolQ/ExbB proton channel [Burkholderia vietnamiensis G4]
gi|134137889|gb|ABO53632.1| MotA/TolQ/ExbB proton channel [Burkholderia vietnamiensis G4]
Length = 231
Score = 170 bits (432), Expect = 1e-40, Method: Composition-based stats.
Identities = 48/214 (22%), Positives = 85/214 (39%), Gaps = 2/214 (0%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
+ + +L S+ SW ++ KS + +RQ FW SL+
Sbjct: 7 VVHYLESGDAITHAVAYVLLAMSVASWCFLLVKSWLLVRAKRQGPRALAAFWRAASLDAG 66
Query: 73 CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSP-IGIQDRIDRMMDVAIARELEEITEK 131
+L + A + D A + + +R+ R + A+ R +
Sbjct: 67 IAALAGADRERVFVPLAEAARDAADEHDPAALAARVERGERVLRALRHAMLRSQRRLEFG 126
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSI 190
L S+ S VG+LG V G+ SIA + ++ G + E+LI GL V+I
Sbjct: 127 QVLLASIGSTAPFVGLLGTVWGIYHALGSIAVSGQAQIENVAGPVGEALIMTAFGLVVAI 186
Query: 191 PSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
P+ +AYN ++ +++GFA + + Q
Sbjct: 187 PAVLAYNILGRLVRQLTEELDGFARDLHVFVCAQ 220
>gi|206562421|ref|YP_002233184.1| transport protein [Burkholderia cenocepacia J2315]
gi|198038461|emb|CAR54419.1| transport protein [Burkholderia cenocepacia J2315]
Length = 238
Score = 170 bits (432), Expect = 1e-40, Method: Composition-based stats.
Identities = 47/205 (22%), Positives = 94/205 (45%), Gaps = 2/205 (0%)
Query: 21 GLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHH 80
V+ + LL +FS+++W++I+ K++ + + R + FW+ S +
Sbjct: 7 TFIVQGALWLLVVFSVVTWTLIVVKAIQSLRSSARNRRYVSAFWAANSFHDAAALDGANS 66
Query: 81 NIG-LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMS 139
+G LAA A+ +S D ++R + I L+ L S+
Sbjct: 67 PVGQLAATGFDALRRADESSAHDLEHSWSRHDLLERHLRQQIHNARRREEAGLAVLASIG 126
Query: 140 SAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIPSSIAYNK 198
S VG+ G V G++ +I S ++ + G I E+L++ +G+ V++P+ +AYN
Sbjct: 127 STAPFVGLFGTVFGIIHALTAITHSASASIDVVAGPIGEALVATGIGIAVAVPAVLAYNF 186
Query: 199 FIEDSKKFAMQMEGFANEFSAILSR 223
F+ K + ++ FA +F + +
Sbjct: 187 FVRRVKAASADLDAFATDFVTLAQK 211
>gi|148553046|ref|YP_001260628.1| MotA/TolQ/ExbB proton channel [Sphingomonas wittichii RW1]
gi|148498236|gb|ABQ66490.1| MotA/TolQ/ExbB proton channel [Sphingomonas wittichii RW1]
Length = 241
Score = 170 bits (431), Expect = 1e-40, Method: Composition-based stats.
Identities = 47/218 (21%), Positives = 86/218 (39%), Gaps = 12/218 (5%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YGL A Q G + +L + S SW ++ K + + Q +
Sbjct: 10 NPYGL-------MAALEQGGTIAWTVFIILVVMSAASWYIMFTKLIEQQKILNQGKRARA 62
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
FW SL+ L+ N I + + P+ + + + +
Sbjct: 63 SFWQAPSLKDGQAKLE--KNSAYRQIVDDGL--LAQDQHTKLTDPVDQHEWLTGSLMRSQ 118
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLI 180
A ++ L+ L ++ S +G+ G V+G+ I ++ ++ G + E+LI
Sbjct: 119 ALINSKLGNGLAVLATVGSTSPFIGLFGTVIGIYRALIKIGAAGQASIDAVAGPVGEALI 178
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFS 218
LGL V++P+ + YN I +K A Q+ FA +
Sbjct: 179 MTALGLAVAVPAVLGYNWLIRRNKVVAEQISAFATDLH 216
>gi|71737513|ref|YP_275035.1| TonB system transport protein ExbB [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|71558066|gb|AAZ37277.1| TonB system transport protein ExbB [Pseudomonas syringae pv.
phaseolicola 1448A]
Length = 228
Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats.
Identities = 47/207 (22%), Positives = 95/207 (45%), Gaps = 4/207 (1%)
Query: 21 GLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHH 80
L + + +L +FS+ +W+V++ K+ L+ Q + + Q FW+ + + S
Sbjct: 7 TLIQQSSMGILLLFSLATWAVLLLKAWQQGRLKNQNKRYTQAFWAAKDFDAALHSGPQKS 66
Query: 81 NIG-LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMS 139
+ LA + A+S + + Q+ ++R + I E + + L S+
Sbjct: 67 QLARLAQVTTQALSGGQDGHEPA--DSWSRQELLERSLHQQIHSERRNLESGMIVLASIG 124
Query: 140 SAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIPSSIAYNK 198
S +G+ G V G++ Q+I+ S ++ + G I E+LI+ +G+ V++P+ +AYN
Sbjct: 125 STAPFIGLFGTVFGIIHALQAISTAKSASIAVVAGPIGEALIATGIGIAVAVPAVLAYNF 184
Query: 199 FIEDSKKFAMQMEGFANEFSAILSRQT 225
F K ++ FA + R
Sbjct: 185 FNRRLKLMVADLDAFAIDLLNRAQRHA 211
>gi|126730594|ref|ZP_01746404.1| probable biopolymer transport transmembrane protein [Sagittula
stellata E-37]
gi|126708760|gb|EBA07816.1| probable biopolymer transport transmembrane protein [Sagittula
stellata E-37]
Length = 269
Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats.
Identities = 49/220 (22%), Positives = 95/220 (43%), Gaps = 5/220 (2%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+S +++ + VK ++ L + S+L W++ + + V RR+ + +LE
Sbjct: 34 MSPVGMYLAADIVVKSVMVSLAVASVLVWAIFVARVVLLTLARRRLARNYRALDRAGTLE 93
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
+ + + A+ A++E ++S G GI++R + +
Sbjct: 94 VAEARFRKRRGV-MGAMVRVALAERQRS---GTAPDGGIKERAESALSRIEVGAARSQQR 149
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVS 189
+ L S VG+ G V G+M F SIA + N+ V PGI E+L++ +GL +
Sbjct: 150 GSALLAITGSTAPFVGLFGTVWGIMNSFISIAETNTTNLAVVAPGIAEALLATAIGLVAA 209
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNI 229
IP+ I YN + + + + LSR + ++
Sbjct: 210 IPAVIFYNLLARMLGGYKVMLGDASALVQRTLSRDLDMSV 249
>gi|116691633|ref|YP_837166.1| MotA/TolQ/ExbB proton channel [Burkholderia cenocepacia HI2424]
gi|116649633|gb|ABK10273.1| outer membrane transport energization protein ExbB [Burkholderia
cenocepacia HI2424]
Length = 238
Score = 169 bits (430), Expect = 2e-40, Method: Composition-based stats.
Identities = 47/205 (22%), Positives = 94/205 (45%), Gaps = 2/205 (0%)
Query: 21 GLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHH 80
V+ + LL +FS+++W++I+ K++ + + R + FW+ S +
Sbjct: 7 TFIVQGALWLLVVFSVVTWTLIVVKAIQSLRSSARNRRYVSAFWAANSFHDAATLDGANS 66
Query: 81 NIG-LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMS 139
+G LAA A+ +S D ++R + I L+ L S+
Sbjct: 67 PVGELAATGFDALRRADESSAHDLEHSWSRHDLLERHLRQQIHNARRREEAGLAVLASIG 126
Query: 140 SAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIPSSIAYNK 198
S VG+ G V G++ +I S ++ + G I E+L++ +G+ V++P+ +AYN
Sbjct: 127 STAPFVGLFGTVFGIIHALTAITHSASASIDVVAGPIGEALVATGIGIAVAVPAVLAYNF 186
Query: 199 FIEDSKKFAMQMEGFANEFSAILSR 223
F+ K + ++ FA +F + +
Sbjct: 187 FVRRVKAASADLDAFATDFVTLAQK 211
>gi|116620404|ref|YP_822560.1| MotA/TolQ/ExbB proton channel [Candidatus Solibacter usitatus
Ellin6076]
gi|116223566|gb|ABJ82275.1| MotA/TolQ/ExbB proton channel [Candidatus Solibacter usitatus
Ellin6076]
Length = 244
Score = 169 bits (430), Expect = 2e-40, Method: Composition-based stats.
Identities = 54/220 (24%), Positives = 100/220 (45%), Gaps = 6/220 (2%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG---QSL 69
+L+ QMG K ++ LFI S S V+I + + + R+Q R+F L
Sbjct: 23 PASLWKQMGPLAKAVVVGLFIMSAYSIGVMIDRLMAYSAARKQSRQFAPAVAGALREGKL 82
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+ K + LA + ++ + E++ + + P + R ++ A A E+
Sbjct: 83 DEAVKIADRYKKSHLAKVVVAGLQEFQ-AHQISSEIPGEEIEASKRALERAEAIVHAELK 141
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCV 188
+S L ++ S VG+ G V+G++ F+ I+ S + GI E+L++ +GL V
Sbjct: 142 RGVSGLATIGSTAPFVGLFGTVVGIINAFKGISNEKSTGLGAVAGGISEALVTTAIGLFV 201
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSA-ILSRQTEG 227
+IP+ +N F + F ++M ++E L R G
Sbjct: 202 AIPAVWMFNYFTGKIESFDVEMGNSSSELIDYFLKRSQRG 241
>gi|320324430|gb|EFW80508.1| TonB system transport protein ExbB [Pseudomonas syringae pv.
glycinea str. B076]
gi|320328162|gb|EFW84166.1| TonB system transport protein ExbB [Pseudomonas syringae pv.
glycinea str. race 4]
Length = 228
Score = 169 bits (430), Expect = 2e-40, Method: Composition-based stats.
Identities = 47/207 (22%), Positives = 95/207 (45%), Gaps = 4/207 (1%)
Query: 21 GLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHH 80
L + + +L +FS+ +W+V++ K+ L+ Q + + Q FW+ + + S
Sbjct: 7 TLIQQSSMGILLLFSLATWAVLLLKAWQQGRLKNQNKRYTQAFWAAKDFDAALHSGPQKS 66
Query: 81 NIG-LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMS 139
+ LA + A+S + + Q+ ++R + I E + + L S+
Sbjct: 67 QLARLAQVTTQALSGGQDGHEPA--DSWSRQELLERSLHQQIHSERRNLESGMIVLASIG 124
Query: 140 SAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIPSSIAYNK 198
S +G+ G V G++ Q+I+ S ++ + G I E+LI+ +G+ V++P+ +AYN
Sbjct: 125 STAPFIGLFGTVFGIIHALQAISTAKSASIAVVAGPIGEALIATGIGIAVAVPAVLAYNF 184
Query: 199 FIEDSKKFAMQMEGFANEFSAILSRQT 225
F K ++ FA + R
Sbjct: 185 FNRRLKLMVADLDAFAIDLLNRAQRHA 211
>gi|146338971|ref|YP_001204019.1| biopolymer transport protein ExbB [Bradyrhizobium sp. ORS278]
gi|146191777|emb|CAL75782.1| biopolymer transport protein ExbB; uptake of enterobactin,
tonB-dependent uptake of B colicins [Bradyrhizobium sp.
ORS278]
Length = 271
Score = 169 bits (430), Expect = 2e-40, Method: Composition-based stats.
Identities = 52/217 (23%), Positives = 100/217 (46%), Gaps = 5/217 (2%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+S +++FMQ + VK ++ L + S+ +W+V++ K++ + R R +SL
Sbjct: 30 LSPWSMFMQADIVVKAVMIGLALSSVATWTVLVVKAIQLRSALRTARRALGAATVARSLL 89
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
+ + + + A E KS A GI++R+ + A + I
Sbjct: 90 DATGGVSADGGV-VGRLLAVAEDEIDKSRGLPAD---GIKERVSWQFERIEAAAVARIGR 145
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVS 189
+ L ++ + G VG+ G V G+M F I+ ++ N+ V PGI E+L++ GL +
Sbjct: 146 GIGILATVGAVGPFVGLFGTVWGIMNSFIGISHAHTTNLAVVAPGIAEALLATAFGLAAA 205
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
IP+ + YN F + + + + +LSR +
Sbjct: 206 IPAVVIYNLFARATSGYRAVIADASVAVMRLLSRDLD 242
>gi|307823127|ref|ZP_07653357.1| MotA/TolQ/ExbB proton channel [Methylobacter tundripaludum SV96]
gi|307735902|gb|EFO06749.1| MotA/TolQ/ExbB proton channel [Methylobacter tundripaludum SV96]
Length = 288
Score = 169 bits (430), Expect = 2e-40, Method: Composition-based stats.
Identities = 53/219 (24%), Positives = 102/219 (46%), Gaps = 10/219 (4%)
Query: 22 LAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHN 81
L V + +L FS+++W++I+ K + + + + R + + FW Q + N
Sbjct: 42 LIVDATLWILIGFSVVTWALILIKGIQHLRISQHNRSYGKKFWGAQDFQAAAALEGNKGP 101
Query: 82 IG-LAAIFMSAMSEWKKSCDKGARSPIG-IQDRIDRMMDVAIARELEEITEKLSFLGSMS 139
+A I + + E G Q+ +DR + + +E + L+ L ++
Sbjct: 102 AARVADIGFTTLIEADGGTTTHDLEHTGDRQELLDRRLRQQMQKERGALESGLAILATIG 161
Query: 140 SAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIPSSIAYNK 198
S VG+ G V G+MG SI+ S ++ + G I E+LI+ +G+ V++P+ I YN
Sbjct: 162 SISPFVGLFGTVWGIMGALTSISKSGSASLDVVAGPIGEALIATAVGIAVAVPAVIGYNF 221
Query: 199 FIEDSKKFAMQMEGFANEFSA-------ILSRQTEGNIS 230
FI +K ++ FA +F ++ R G+++
Sbjct: 222 FIRRNKVIWAFLDDFAIDFVHLALKTSFLIKRPASGSVA 260
>gi|330880022|gb|EGH14171.1| TonB system transport protein ExbB [Pseudomonas syringae pv.
glycinea str. race 4]
Length = 210
Score = 169 bits (430), Expect = 2e-40, Method: Composition-based stats.
Identities = 47/206 (22%), Positives = 95/206 (46%), Gaps = 4/206 (1%)
Query: 21 GLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHH 80
L + + +L +FS+ +W+V++ K+ L+ Q + + Q FW+ + + S
Sbjct: 7 TLIQQSSMGILLLFSLATWAVLLLKAWQQGRLKNQNKRYTQAFWAAKDFDAALHSGPQKS 66
Query: 81 NIG-LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMS 139
+ LA + A+S + + Q+ ++R + I E + + L S+
Sbjct: 67 QLARLAQVTTQALSGGQDGHEPA--DSWSRQELLERSLHQQIHSERRNLESGMIVLASIG 124
Query: 140 SAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIPSSIAYNK 198
S +G+ G V G++ Q+I+ S ++ + G I E+LI+ +G+ V++P+ +AYN
Sbjct: 125 STAPFIGLFGTVFGIIHALQAISTAKSASIAVVAGPIGEALIATGIGIAVAVPAVLAYNF 184
Query: 199 FIEDSKKFAMQMEGFANEFSAILSRQ 224
F K ++ FA + R
Sbjct: 185 FNRRLKLMVADLDAFAIDLLNRAQRH 210
>gi|302038653|ref|YP_003798975.1| protein TolQ [Candidatus Nitrospira defluvii]
gi|300606717|emb|CBK43050.1| Protein TolQ [Candidatus Nitrospira defluvii]
Length = 240
Score = 169 bits (430), Expect = 2e-40, Method: Composition-based stats.
Identities = 53/223 (23%), Positives = 98/223 (43%), Gaps = 13/223 (5%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
+ L +G K ++ LLF+ SILSW VI K F R+ + F F + L+ +
Sbjct: 6 VMGLVGSLGAVSKIVLLLLFVASILSWGVIFYKWRTFKAADREDQRFFSAFTKIRDLDEL 65
Query: 73 CKSLKNHHNIGLAAIFMSAMSEWKKSCDKG----------ARSPIGIQD--RIDRMMDVA 120
+ K A +F M G ++ P+ D +D+ +
Sbjct: 66 YRQSKRADGSPSARVFQGIMDRVLTVSGDGTVSASQSAGVSKDPVAAIDHQYMDKTVAYL 125
Query: 121 IARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESL 179
+ ++ + L L + + +G+LG VLG++ F+ I + ++ ++ PG+ E+L
Sbjct: 126 VQNQVSHLESYLPVLATTGNITPFIGLLGTVLGIIDSFREIGTQGTASIAAVAPGVSEAL 185
Query: 180 ISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
++ GL +IP+ I YN ++ +K ++E F E L
Sbjct: 186 VATAAGLFTAIPAVIFYNYYLTRIRKTVFRIESFTVEAMRSLQ 228
>gi|330899694|gb|EGH31113.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. japonica
str. M301072PT]
Length = 222
Score = 169 bits (430), Expect = 2e-40, Method: Composition-based stats.
Identities = 48/199 (24%), Positives = 92/199 (46%), Gaps = 5/199 (2%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLA 85
+ L + SI SW V++ K V R + + + FWS +L+ + L +H A
Sbjct: 1 GVALTLLVMSIASWYVMVDKLVRLALHRLRSPKLLEAFWSAPTLKDGVQQLGHH--SAYA 58
Query: 86 AIFMSAMSEWKKSCD--KGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
+ + +S ++ D G P + ++R + A ++ ++ L ++ S+
Sbjct: 59 ELTQAGVSAARQHRDALDGDMHPPAFSEWLNRALRQATLTVGGQLQGGMAILATVGSSAP 118
Query: 144 LVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIPSSIAYNKFIED 202
VG+LG V G+ I ++ + G + E+LI LGL V+IP+++ YN +
Sbjct: 119 FVGLLGTVWGIYHALMKIGLTGDASIDKVAGPVGETLIMTALGLAVAIPATLGYNLLVRS 178
Query: 203 SKKFAMQMEGFANEFSAIL 221
+K+ ++ FA E +L
Sbjct: 179 NKQTLAELGKFAFELHDLL 197
>gi|70733732|ref|YP_257372.1| TonB system transport protein ExbB [Pseudomonas fluorescens Pf-5]
gi|68348031|gb|AAY95637.1| TonB system transport protein ExbB [Pseudomonas fluorescens Pf-5]
Length = 241
Score = 169 bits (429), Expect = 2e-40, Method: Composition-based stats.
Identities = 51/203 (25%), Positives = 101/203 (49%), Gaps = 3/203 (1%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIG-- 83
+I LL +FS+ +W + + K V F L+ Q R+F FW+ SL++ +
Sbjct: 14 AVIWLLVVFSVATWGLALVKGVQFARLKSQDRKFHNQFWAASSLDSAASLSETQPGAAAR 73
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
+A +A+ + I QDR++R + I RE + L+ + S+ S
Sbjct: 74 VAQAGYAAIQVGEAPHAADLSQAINHQDRLERALRQQIVRERRSLETGLAVVASIGSTSP 133
Query: 144 LVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIPSSIAYNKFIED 202
+G+ G V G+M + I+ S ++ ++ G I +L++ +G+ V++P+ + YN F+
Sbjct: 134 FIGLFGTVWGIMEALKGISAAGSASLETVAGPIGAALVATGVGIAVAVPAVLVYNYFLRR 193
Query: 203 SKKFAMQMEGFANEFSAILSRQT 225
K A ++ FA++F ++ + +
Sbjct: 194 LKLTAADLDDFAHDFYSLAQKNS 216
>gi|237746079|ref|ZP_04576559.1| MotA/TolQ/ExbB proton channel family protein [Oxalobacter
formigenes HOxBLS]
gi|229377430|gb|EEO27521.1| MotA/TolQ/ExbB proton channel family protein [Oxalobacter
formigenes HOxBLS]
Length = 235
Score = 169 bits (429), Expect = 2e-40, Method: Composition-based stats.
Identities = 52/221 (23%), Positives = 97/221 (43%), Gaps = 12/221 (5%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YG + AL+ Q G ++C+ LL S++SW++I + L +
Sbjct: 4 NPYG-------VLALWNQGGWVIRCVALLLLAMSVVSWTIIAARVWRAWKLYGLSKR-MA 55
Query: 62 LFWSGQSLETVCKSLKNHH-NIGLAAIFMSAMSEWKKSCD--KGARSPIGIQDRIDRMMD 118
+FW + + L+ + A+ + K + + R +G+ + + +
Sbjct: 56 VFWKATTFSAGLEMLETAPEDNPFHALARDGLIAAKHYTEGPEKLRERMGMAEWLTENLR 115
Query: 119 VAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIE 177
+I + ++ LS L S+ + +G+ G V G+ SI ++ I G + E
Sbjct: 116 GSIDESMAKMQHGLSALASIGATAPFIGLFGTVWGIYHALVSIGVSGQASIDKIAGPVGE 175
Query: 178 SLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFS 218
SLI LGL V+IP+ + YN +++FA Q+ FA +
Sbjct: 176 SLIMTALGLAVAIPAVLGYNALTRINRRFAGQLNRFARQLY 216
>gi|167837877|ref|ZP_02464760.1| MotA/TolQ/ExbB proton channel family protein [Burkholderia
thailandensis MSMB43]
Length = 231
Score = 169 bits (429), Expect = 2e-40, Method: Composition-based stats.
Identities = 44/213 (20%), Positives = 82/213 (38%), Gaps = 4/213 (1%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
I + +L SI SW ++ K+ + +RQ FW +L+
Sbjct: 7 ILHYLESGDAVTHAVAYVLLAMSIASWCFLLVKAWVLVRAKRQGPGALAAFWRAATLDDG 66
Query: 73 CKSLKNHHNIGLAAIF---MSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+L+ + A + + + +R+ R + A+ +
Sbjct: 67 VAALRAADKERVFAPLAEAARDADAASRVEPHALFARVERGERVLRALRHALRASQRRLE 126
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCV 188
L S+ S VG+LG V G+ SIA + ++ G + E+LI GL V
Sbjct: 127 FGQVLLASIGSTAPFVGLLGTVWGIYHALGSIAASGQAQIENVAGPVGEALIMTAFGLVV 186
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+IP+ +AYN ++ +++GFA + +
Sbjct: 187 AIPAVLAYNILGRLVRQLVEELDGFARDLHVFV 219
>gi|170736366|ref|YP_001777626.1| MotA/TolQ/ExbB proton channel [Burkholderia cenocepacia MC0-3]
gi|169818554|gb|ACA93136.1| MotA/TolQ/ExbB proton channel [Burkholderia cenocepacia MC0-3]
Length = 238
Score = 169 bits (429), Expect = 2e-40, Method: Composition-based stats.
Identities = 47/205 (22%), Positives = 94/205 (45%), Gaps = 2/205 (0%)
Query: 21 GLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHH 80
V+ + LL +FS+++W++I+ K++ + + R + FW+ S +
Sbjct: 7 TFIVQGALWLLVVFSVVTWTLIVVKAIQSLRSSARNRRYVSAFWAANSFHDAATLDGANS 66
Query: 81 NIG-LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMS 139
+G LAA A+ +S D ++R + I L+ L S+
Sbjct: 67 PVGELAATGFDALRRADESSAHDLEHSWSRHDLLERHLRQQIHNARRREEAGLAVLASIG 126
Query: 140 SAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIPSSIAYNK 198
S VG+ G V G++ +I S ++ + G I E+L++ +G+ V++P+ +AYN
Sbjct: 127 STAPFVGLFGTVFGIIHALTAITHSASASIDVVAGPIGEALVATGIGIAVAVPAVLAYNF 186
Query: 199 FIEDSKKFAMQMEGFANEFSAILSR 223
F+ K + ++ FA +F + +
Sbjct: 187 FVRRVKAASADLDAFATDFVTLAQK 211
>gi|171057168|ref|YP_001789517.1| MotA/TolQ/ExbB proton channel [Leptothrix cholodnii SP-6]
gi|170774613|gb|ACB32752.1| MotA/TolQ/ExbB proton channel [Leptothrix cholodnii SP-6]
Length = 233
Score = 169 bits (429), Expect = 2e-40, Method: Composition-based stats.
Identities = 45/210 (21%), Positives = 85/210 (40%), Gaps = 3/210 (1%)
Query: 17 FMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSL 76
+ + + + LL S+ +W +I KS RR FW L+ + L
Sbjct: 8 WSEGDAVSRGVALLLLAMSVSAWVLIFWKSWVLGRARRDLAVVVPAFWRAPDLDAGQRLL 67
Query: 77 KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLG 136
+ L + A + + Q ++ R + A+ L ++ + L
Sbjct: 68 ASRDREQLLLPLLDAAL--RPVSADTLEAGTHTQAQLTRRLRDALHGVLAQLQQGQVLLA 125
Query: 137 SMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIPSSIA 195
S+ + +G+ G V G+ I+ S ++ + G + E+LI GL V+IP+ +A
Sbjct: 126 SVGATAPFIGLFGTVWGIYHALLGISAAGSVSIDKVAGPVGEALIMTAAGLAVAIPAVLA 185
Query: 196 YNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
YN F + +EG+A++ +L Q
Sbjct: 186 YNLFGKWVGACEADLEGYAHDLREMLVEQA 215
>gi|56552612|ref|YP_163451.1| MotA/TolQ/ExbB proton channel protein [Zymomonas mobilis subsp.
mobilis ZM4]
gi|241762143|ref|ZP_04760226.1| MotA/TolQ/ExbB proton channel [Zymomonas mobilis subsp. mobilis
ATCC 10988]
gi|56544186|gb|AAV90340.1| MotA/TolQ/ExbB proton channel [Zymomonas mobilis subsp. mobilis
ZM4]
gi|241373393|gb|EER62993.1| MotA/TolQ/ExbB proton channel [Zymomonas mobilis subsp. mobilis
ATCC 10988]
Length = 247
Score = 169 bits (428), Expect = 3e-40, Method: Composition-based stats.
Identities = 46/208 (22%), Positives = 85/208 (40%), Gaps = 5/208 (2%)
Query: 15 ALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCK 74
Q G ++ +L + S SW VI K + Q RE FW+ SL+ K
Sbjct: 18 GALQQGGAPTWTVLIILVLMSAASWYVIFTKLWEQHRVLVQSREVGAAFWNAPSLKDAAK 77
Query: 75 SLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSF 134
L+ N I + + + I + ++ ++ ++ + L+
Sbjct: 78 KLE--ENTAYRQIVEDGLDADTQYVK--IPNAIDQHEWLNDSLERSVGSINARLGSGLAI 133
Query: 135 LGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIPSS 193
L ++ + VG+ G V G+ G I ++ + G + E+LI +GL V++P+
Sbjct: 134 LATVGATSPFVGLFGTVNGIYGALVQIGASGQASIGKVAGPVGEALIMTSIGLAVAVPAV 193
Query: 194 IAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+ YN +K A ++ FA + A L
Sbjct: 194 LGYNWLSRRNKTIAERIGSFAIDVHAYL 221
>gi|325265637|ref|ZP_08132327.1| TonB family auxiliary protein ExbB [Kingella denitrificans ATCC
33394]
gi|324982907|gb|EGC18529.1| TonB family auxiliary protein ExbB [Kingella denitrificans ATCC
33394]
Length = 219
Score = 169 bits (428), Expect = 3e-40, Method: Composition-based stats.
Identities = 41/220 (18%), Positives = 100/220 (45%), Gaps = 5/220 (2%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+++ +F Q + + L SI +W VI+ +S+ + ++ + WS ++L
Sbjct: 1 MNLGLVFQQGDPVLIGVFLFLISMSICTWCVIVLRSIRHVAAKKANAAASEAIWSSKTLA 60
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQ---DRIDRMMDVAIARELEE 127
+ ++ + + A++ ++ D + G + ++R + + ++ +
Sbjct: 61 -GAEKAAKQTPSPISELTLDALTAQRRFRDGSLQQLSGSLPEPEFLEREVRHSASKIMSR 119
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGL 186
++ L ++ S +G+LG V G+ +I+ ++ + G I E+L++ +GL
Sbjct: 120 FEGGMTALATIGSTAPFIGLLGTVWGIYHALINISKSGQMSIAEVSGPIGEALVATAVGL 179
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
V+IP+ +AYN F +K + + +A++ L E
Sbjct: 180 FVAIPAVLAYNCFSRGNKNLSRTLHNYAHDLHVQLINHKE 219
>gi|320107205|ref|YP_004182795.1| MotA/TolQ/ExbB proton channel [Terriglobus saanensis SP1PR4]
gi|319925726|gb|ADV82801.1| MotA/TolQ/ExbB proton channel [Terriglobus saanensis SP1PR4]
Length = 262
Score = 169 bits (428), Expect = 3e-40, Method: Composition-based stats.
Identities = 45/190 (23%), Positives = 86/190 (45%), Gaps = 3/190 (1%)
Query: 34 FSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMS 93
SI SW+++I K F + Q + F + F L + L A+F
Sbjct: 52 CSIFSWTIMITKWQTFRKAQVQSQRFLRAFRKSTRLGEIATVADQFKPSPLVAVFTEIAD 111
Query: 94 EWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLG 153
E+++ G R ++R A + L + +L++L ++++A +G+ G V+G
Sbjct: 112 EYQR--QTGGRGLPRNPQGLERAAQTAASEALSGMESRLTWLATIAAAAPFIGLFGTVMG 169
Query: 154 MMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEG 212
++ F + + + PGI E+LI+ GL V++P+ + YN+F + +M+
Sbjct: 170 IIDAFHGLGTAGAATLRAVAPGISEALITTAAGLVVAVPALVGYNQFAARLRDMGGRMDD 229
Query: 213 FANEFSAILS 222
FA E +
Sbjct: 230 FARELLNAIE 239
>gi|260753733|ref|YP_003226626.1| MotA/TolQ/ExbB proton channel [Zymomonas mobilis subsp. mobilis
NCIMB 11163]
gi|258553096|gb|ACV76042.1| MotA/TolQ/ExbB proton channel [Zymomonas mobilis subsp. mobilis
NCIMB 11163]
Length = 247
Score = 169 bits (428), Expect = 4e-40, Method: Composition-based stats.
Identities = 46/208 (22%), Positives = 85/208 (40%), Gaps = 5/208 (2%)
Query: 15 ALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCK 74
Q G ++ +L + S SW VI K + Q RE FW+ SL+ K
Sbjct: 18 GALQQGGAPTWTVLIILVLMSAASWYVIFTKLWEQHRVLVQSREVGAAFWNAPSLKDAAK 77
Query: 75 SLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSF 134
L+ N I + + + I + ++ ++ ++ + L+
Sbjct: 78 KLE--ENTAYRQIVEDGLDADTQYVK--IPNAIDQHEWLNDSLERSVGSINARLGSGLAI 133
Query: 135 LGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIPSS 193
L ++ + VG+ G V G+ G I ++ + G + E+LI +GL V++P+
Sbjct: 134 LATVGATSPFVGLFGTVNGIYGALVQIGASGQASIGKVAGPVGEALIMTSIGLAVAVPAV 193
Query: 194 IAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+ YN +K A ++ FA + A L
Sbjct: 194 LGYNWLSRRNKTIAERIGSFAIDVHAYL 221
>gi|53805154|ref|YP_113182.1| MotA/TolQ/ExbB proton channel family protein [Methylococcus
capsulatus str. Bath]
gi|53758915|gb|AAU93206.1| MotA/TolQ/ExbB proton channel family protein [Methylococcus
capsulatus str. Bath]
Length = 218
Score = 169 bits (428), Expect = 4e-40, Method: Composition-based stats.
Identities = 48/208 (23%), Positives = 97/208 (46%), Gaps = 4/208 (1%)
Query: 22 LAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHN 81
L + + +L FS+L+W++I+ K + R FE+ FW SL+ + +
Sbjct: 8 LIINVTLWVLIAFSVLTWTLIVLKVWQYWRQSLANRSFEERFWGASSLDEARGEIASGKT 67
Query: 82 IGLAAIFMSAMS---EWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSM 138
+ + + ++S + + ++R + + RE L+ L S+
Sbjct: 68 APVVRLAGAGFEVLDNARQSHPPALKYRGDLLATLERKLKRQLERESRLSDIGLTVLASI 127
Query: 139 SSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIPSSIAYN 197
S VG+ G V G+M Q I+ ++ + G I E+LI+ +G+ V++P+ +AYN
Sbjct: 128 GSTAPFVGLFGTVWGIMHALQDISRSGKASLEVVAGPIGEALIATAIGIAVAVPAVLAYN 187
Query: 198 KFIEDSKKFAMQMEGFANEFSAILSRQT 225
+ S++ +E FA +F +++ +T
Sbjct: 188 FLMRQSRRKQQALEIFAEDFLHLVAAET 215
>gi|121606676|ref|YP_984005.1| MotA/TolQ/ExbB proton channel [Polaromonas naphthalenivorans CJ2]
gi|120595645|gb|ABM39084.1| MotA/TolQ/ExbB proton channel [Polaromonas naphthalenivorans CJ2]
Length = 237
Score = 168 bits (427), Expect = 4e-40, Method: Composition-based stats.
Identities = 51/220 (23%), Positives = 90/220 (40%), Gaps = 4/220 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+S+ AL Q GL + + LL S+ SW VI+ K+ FW S++
Sbjct: 1 MSLLALLTQGGLVSQLVAGLLLSMSVASWVVILWKTWLLHRAVGDVARSTAAFWQSASVD 60
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
C+ + L ++A A ++ R++ A+ L+++
Sbjct: 61 AACEKVAAFDRDALVLPLIAATQTRAHGTLATAGDKAA---QLTRVLRDALHAILQKLQF 117
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVS 189
L ++ S VG+LG V G+ +A + + G + E+LI GL V+
Sbjct: 118 GQILLATVGSTAPFVGLLGTVWGIYHALTGMATAGQVTIDKVSGPVGEALIMTAAGLAVA 177
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNI 229
IP+ +AYN F + +EGFA + +L+ +
Sbjct: 178 IPAVLAYNVFGRSIGRIEADLEGFAFDLRELLAADANAKV 217
>gi|325123088|gb|ADY82611.1| tolerance to group A colicins, single-stranded DNA filamentous
phage, required for OM integrity [Acinetobacter
calcoaceticus PHEA-2]
Length = 185
Score = 168 bits (427), Expect = 4e-40, Method: Composition-based stats.
Identities = 49/178 (27%), Positives = 90/178 (50%), Gaps = 3/178 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+ I L +Q V+ ++ +L + SI SW +I + +++ + F+++FWSG L
Sbjct: 9 LHISDLILQASPVVQLVMLILLLASIFSWYLIAKLHMSYKKAHQDDEHFQKMFWSGAELN 68
Query: 71 TVCKSLK-NHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
T+ + + N GL IF +SE+ K + A I + +R++ V ++R+ +
Sbjct: 69 TLYNNAQLNSKRSGLEDIFYQGLSEFFKLKKRQAPVSQTI-EGTERILRVGLSRDQSHLE 127
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
L L S+ S +G+ G V G+M F +A + ++ PGI E+LI+ +GL
Sbjct: 128 YGLGTLASIGSVAPYIGLFGTVWGIMNAFIGLAAVDQVTLATVAPGIAEALIATAIGL 185
>gi|296114418|ref|ZP_06833072.1| MotA/TolQ/ExbB proton channel [Gluconacetobacter hansenii ATCC
23769]
gi|295979179|gb|EFG85903.1| MotA/TolQ/ExbB proton channel [Gluconacetobacter hansenii ATCC
23769]
Length = 255
Score = 168 bits (427), Expect = 4e-40, Method: Composition-based stats.
Identities = 40/221 (18%), Positives = 93/221 (42%), Gaps = 11/221 (4%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YGL AL+ + ++ ++ + S+ +W ++I K + + + + +
Sbjct: 34 NPYGLG-------ALWSNGDFIARTVLLIMVVMSVGTWYIMISKFLEQARILKDAKIMKT 86
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
FW+ +++ ++ A +E + + I + + ++
Sbjct: 87 DFWTKPTIQAGSDAMPASSPFRYIAQTGITAAEH---HEGTMQEAIDLHSWTTMSILRSV 143
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLI 180
+ L+FLG++ S VG+ G V G+ +I + ++ + G + ESLI
Sbjct: 144 ELVQTRLQGGLAFLGTVGSTSPFVGLFGTVWGIYHALTAIGIAGNASIDKVAGPVGESLI 203
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+GL ++P+ + YN + +K ++ FA + ++L
Sbjct: 204 MTAIGLGTAVPAVLGYNLLVRRNKGAMDEVRNFAADVQSVL 244
>gi|303246170|ref|ZP_07332451.1| MotA/TolQ/ExbB proton channel [Desulfovibrio fructosovorans JJ]
gi|302492566|gb|EFL52437.1| MotA/TolQ/ExbB proton channel [Desulfovibrio fructosovorans JJ]
Length = 235
Score = 168 bits (427), Expect = 5e-40, Method: Composition-based stats.
Identities = 54/214 (25%), Positives = 96/214 (44%), Gaps = 2/214 (0%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
MD ++ Q K ++ LL + S++SW+VI K + +R S
Sbjct: 1 MDSTLLQALSQATGVAKAVLALLVVMSVVSWTVIYWKWRSLTVAKRGVSRLTGQILEADS 60
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
L ++ + ++ E+ K G + + D + R++ IA E+ +
Sbjct: 61 LAEAAAAIDALAGPSIRSMASLGFKEFTKLSLSGDAEKL-VSDNVRRILHHGIAEEMRGL 119
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLC 187
+ L L ++A +G+ G V G+M F +I S ++ ++ PGI E+LI+ +GL
Sbjct: 120 SRALPLLAIAANAAPFIGLFGTVWGIMHSFHAIGQMQSASLATVAPGISEALIATAVGLA 179
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
V+IP+S+AYN F+ + Q FA L
Sbjct: 180 VAIPASVAYNMFLGMIESLESQYISFAGLLLNRL 213
>gi|220904727|ref|YP_002480039.1| MotA/TolQ/ExbB proton channel [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
gi|219869026|gb|ACL49361.1| MotA/TolQ/ExbB proton channel [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
Length = 229
Score = 168 bits (425), Expect = 7e-40, Method: Composition-based stats.
Identities = 52/215 (24%), Positives = 95/215 (44%), Gaps = 2/215 (0%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLET 71
S+ +Q L KC++ LL S+ SW+ + K + + +R+ + F L
Sbjct: 3 SMIEAVLQATLISKCVLVLLLFMSVSSWAYMCGKWLTLRSAQRRTQRGLVAFDDAGELCQ 62
Query: 72 VCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEK 131
++ L I A+ E+ + G + + D + R + AIA E+ +
Sbjct: 63 ALPVMEADRQSPLYGITRRAVREYNRLTRTGDTERL-LNDNVRRALHFAIAEEVARLKSS 121
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCVSI 190
L+ L + ++ +G+ G V G+M F +IA S ++ ++ PGI E+LI+ +GL V+I
Sbjct: 122 LALLATAANTAPFIGLFGTVWGIMHSFTAIAQMKSVSLATVAPGIAEALIATAVGLFVAI 181
Query: 191 PSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
P+ YN F +A + L +
Sbjct: 182 PAVCGYNVFRAKLVYIEGVCINYAGQLLNRLQHEA 216
>gi|319404748|emb|CBI78350.1| Biopolymer transport exbB protein [Bartonella rochalimae ATCC
BAA-1498]
Length = 274
Score = 168 bits (425), Expect = 7e-40, Method: Composition-based stats.
Identities = 56/248 (22%), Positives = 103/248 (41%), Gaps = 24/248 (9%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N L + D S F++FM V+ +I L + S+LSW++ K V F + + R Q
Sbjct: 11 NTNALPMHDFSPFSMFMAADWVVQAVIIALLLASLLSWTIAFFKIVEFTVAKYKARRVFQ 70
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDK-------------------- 101
L Q+ + S + + + E + S +
Sbjct: 71 LTNDAQTFAELIASFQKIKGTSV-FFLEEVLKEIRLSSQQLCLMKSKDLHQNQSEVFPYD 129
Query: 102 --GARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQ 159
+ G+++R+ ++ ++ + I + L ++ S VG+ V G+M F
Sbjct: 130 ILSCGNIDGVKERVHSLLSRSLFAAMRRIACGSAVLATIGSVAPFVGLFATVWGIMNAFI 189
Query: 160 SIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFS 218
IA + + V PGI E+L++ +GL V+IP+ I YN FI + + A
Sbjct: 190 GIAKSQTTRLDVVAPGIAEALLATAIGLFVAIPAVILYNGFIRFLNGYRNDLADIAAAIE 249
Query: 219 AILSRQTE 226
++SR+ +
Sbjct: 250 RLISREFD 257
>gi|319406236|emb|CBI79873.1| Biopolymer transport exbB protein [Bartonella sp. AR 15-3]
Length = 274
Score = 168 bits (425), Expect = 7e-40, Method: Composition-based stats.
Identities = 57/245 (23%), Positives = 99/245 (40%), Gaps = 24/245 (9%)
Query: 5 GLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFW 64
L++ D S F++FM VK +I LL + S+LSW++ K V + + R L
Sbjct: 14 ALSMHDFSPFSMFMAADWVVKAVIILLLLASLLSWTIAFIKIVELTVAKYKARHALHLTN 73
Query: 65 SGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDK----------------------G 102
Q+L + + K + + E S +
Sbjct: 74 KAQTLAELIANFKEIKGTSV-FFLEETLKEIHLSSQQPRLMTSEDLHKNQGEVFSDDILS 132
Query: 103 ARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA 162
G+++RI ++ + I + L ++ S VG+ V G+M F IA
Sbjct: 133 CGQIDGVKERIHSLLSRYLFAATRRIASGSAILATIGSVAPFVGLFATVWGIMNSFIGIA 192
Query: 163 GYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+ + V PGI E+L++ +GL V+IP+ I YN FI + + A ++
Sbjct: 193 KSQTTRLDVVAPGIAEALLATAIGLFVAIPAVIIYNGFIRVLHGYRNDLTDIAAAIERLV 252
Query: 222 SRQTE 226
SR+ +
Sbjct: 253 SREFD 257
>gi|262477953|gb|ACY68246.1| ExbB [Lysobacter enzymogenes]
Length = 249
Score = 168 bits (425), Expect = 8e-40, Method: Composition-based stats.
Identities = 45/221 (20%), Positives = 91/221 (41%), Gaps = 5/221 (2%)
Query: 7 AIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG 66
A+ +S L L + L + S+LS I+ V + LR FW
Sbjct: 17 ALQQMSFSHLLQNFDLVGWIVFITLTLMSVLSVYWIVINFVKNLRLRGSSDRVVSTFWET 76
Query: 67 QSLETVCKSLKNHHNI-GLAAIFMSAMSEWK---KSCDKGARSPIGIQDRIDRMMDVAIA 122
+ + + ++ + I + A + + + +DR + A+
Sbjct: 77 PNAQDAIRYMEEQPRSEPFSKIALDAAQAAAHHQRHEGSRLVESLNRSEFVDRALRQAVT 136
Query: 123 RELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLIS 181
RE + L+ L ++ S VG+LG V G+ + +++ ++ G + E+LI
Sbjct: 137 RESSRLEAGLTVLATVGSTAPFVGLLGTVWGIYHALLRLGASGESSIQAVAGPVGEALIM 196
Query: 182 ILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
+GL V+IP+ +AYN F+ ++ + + FA++ +
Sbjct: 197 TAIGLFVAIPAVLAYNFFVRLNRVTNNKFDTFAHDLHDFFA 237
>gi|78065214|ref|YP_367983.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. 383]
gi|77965959|gb|ABB07339.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. 383]
Length = 222
Score = 168 bits (425), Expect = 8e-40, Method: Composition-based stats.
Identities = 47/214 (21%), Positives = 84/214 (39%), Gaps = 2/214 (0%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
+ + +L SI SW + K+ + +RQ FW SL+
Sbjct: 7 VVHYLESGDAITHAVAYVLLAMSIASWCFLFMKAWLLVRAKRQGPRALAAFWRAPSLDAG 66
Query: 73 CKSLKNHHNIGL-AAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEK 131
+L + + +A + + +R+ R + A+ R +
Sbjct: 67 IAALAGADRERVFVPLAEAARDAADDHDPAALAARVDRSERVLRALRHAMLRSQRRLEFG 126
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSI 190
L S+ S VG+LG V G+ SIA + ++ G + E+LI GL V+I
Sbjct: 127 QVLLASIGSTAPFVGLLGTVWGIYHALGSIAASGQAQIENVAGPVGEALIMTAFGLVVAI 186
Query: 191 PSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
P+ +AYN ++ A +++GFA + + Q
Sbjct: 187 PAVLAYNILGRLVRQLAEELDGFARDLHVFVCAQ 220
>gi|192289842|ref|YP_001990447.1| tonB-system energizer ExbB [Rhodopseudomonas palustris TIE-1]
gi|192283591|gb|ACE99971.1| tonB-system energizer ExbB [Rhodopseudomonas palustris TIE-1]
Length = 257
Score = 168 bits (425), Expect = 8e-40, Method: Composition-based stats.
Identities = 44/216 (20%), Positives = 98/216 (45%), Gaps = 5/216 (2%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S + +F + VK ++ L + S+ +W+V + K++ + R+ + +L
Sbjct: 35 DLSAWGMFKNADIVVKVVMAGLALASLATWTVWLSKTIELRRETARARDGLSKLETDTTL 94
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+ + + H+ ++ + +A E S G ++R+ ++ A +I
Sbjct: 95 AELGRGSEGAHD-AVSQLIQTAAREGSLS---GWTFDADFKERVALRLERVEAAMARKIA 150
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCV 188
L ++ + VG+ G V G+M F I+ ++ N+ V PGI E+L++ LGL
Sbjct: 151 SGTGILATVGAVAPFVGLFGTVWGIMNAFIGISEAHTTNLAVVAPGIAEALLATALGLVA 210
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
++P+ + YN + + + + + ++SR
Sbjct: 211 AVPAVVIYNYLVRAIATYRALLGDASAQVLLLVSRD 246
>gi|171318263|ref|ZP_02907424.1| MotA/TolQ/ExbB proton channel [Burkholderia ambifaria MEX-5]
gi|171096527|gb|EDT41423.1| MotA/TolQ/ExbB proton channel [Burkholderia ambifaria MEX-5]
Length = 238
Score = 168 bits (425), Expect = 8e-40, Method: Composition-based stats.
Identities = 47/205 (22%), Positives = 93/205 (45%), Gaps = 2/205 (0%)
Query: 21 GLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHH 80
V+ + LL +FS+++W++I+ K++ + + R FW+ S +
Sbjct: 7 TFIVQGALWLLVVFSVVTWTLIVVKAIQSLRSSARNRHCVSAFWAANSFHDAAALDGANS 66
Query: 81 NIG-LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMS 139
+G LAA A+ +S D ++R + I L+ L S+
Sbjct: 67 PVGELAATGFDALRRADESSAHDLEHSWSRHDLLERHLRQQIHNARRREEAGLAVLASIG 126
Query: 140 SAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIPSSIAYNK 198
S VG+ G V G++ +I S ++ + G I E+L++ +G+ V++P+ +AYN
Sbjct: 127 STAPFVGLFGTVFGIIHALTAITHSASASIDVVAGPIGEALVATGIGIAVAVPAVLAYNF 186
Query: 199 FIEDSKKFAMQMEGFANEFSAILSR 223
F+ K + ++ FA +F + +
Sbjct: 187 FVRRVKAASADLDAFATDFVTLAQK 211
>gi|115350601|ref|YP_772440.1| MotA/TolQ/ExbB proton channel [Burkholderia ambifaria AMMD]
gi|170704110|ref|ZP_02894729.1| MotA/TolQ/ExbB proton channel [Burkholderia ambifaria IOP40-10]
gi|172059634|ref|YP_001807286.1| MotA/TolQ/ExbB proton channel [Burkholderia ambifaria MC40-6]
gi|115280589|gb|ABI86106.1| MotA/TolQ/ExbB proton channel [Burkholderia ambifaria AMMD]
gi|170130983|gb|EDS99691.1| MotA/TolQ/ExbB proton channel [Burkholderia ambifaria IOP40-10]
gi|171992151|gb|ACB63070.1| MotA/TolQ/ExbB proton channel [Burkholderia ambifaria MC40-6]
Length = 222
Score = 167 bits (424), Expect = 9e-40, Method: Composition-based stats.
Identities = 48/214 (22%), Positives = 86/214 (40%), Gaps = 2/214 (0%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
+ + +L S+ SW ++ K+ + +RQ FW SL+
Sbjct: 7 VVHYLESGDAITHAVAYVLLAMSVASWCFLLMKAWLLVRAKRQGPRALAAFWRAASLDAG 66
Query: 73 CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSP-IGIQDRIDRMMDVAIARELEEITEK 131
+L + A + D A + + +R+ R + A+ R +
Sbjct: 67 IDALAGADRERVFVPLAEAARDAADEHDPAALAARVERSERVLRALRHAMLRSQRRLEFG 126
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSI 190
L S+ S VG+LG V G+ SIA + ++ G + E+LI GL V+I
Sbjct: 127 QVLLASIGSTAPFVGLLGTVWGIYHALGSIAASGQAQIENVAGPVGEALIMTAFGLVVAI 186
Query: 191 PSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
P+ +AYN ++ A +++GFA + + Q
Sbjct: 187 PAVLAYNILGRLVRQLAEELDGFARDLHVFVCAQ 220
>gi|330815525|ref|YP_004359230.1| hypothetical protein bgla_1g05810 [Burkholderia gladioli BSR3]
gi|327367918|gb|AEA59274.1| hypothetical protein bgla_1g05810 [Burkholderia gladioli BSR3]
Length = 232
Score = 167 bits (424), Expect = 9e-40, Method: Composition-based stats.
Identities = 47/212 (22%), Positives = 86/212 (40%), Gaps = 1/212 (0%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
+ + + LLF S+ SW ++ K+ +RQ FW
Sbjct: 2 ATETGVVHYLASGDAVTHGVAWLLFAMSVASWCFLLVKAWTLARAKRQGPGAIAAFWRAG 61
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
S + +L++ + A A E + + + +R+ R + A+
Sbjct: 62 SFDEGLAALRSADRERVFAPLAEAAREAADAAPSLLGARVERGERVLRAVRQAMRGSQRR 121
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGL 186
+ L L S++S VG+LG V G+ SIA + ++ G + E+LI GL
Sbjct: 122 LEFGLVLLASIASTAPFVGLLGTVWGIYHALGSIAESGQAQIGNVAGPVGEALIMTAFGL 181
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFS 218
V+IP+ +AYN ++ + ++GFA +
Sbjct: 182 VVAIPAVLAYNLLGRLVRQLSEDLDGFARDLH 213
>gi|307823184|ref|ZP_07653414.1| MotA/TolQ/ExbB proton channel [Methylobacter tundripaludum SV96]
gi|307735959|gb|EFO06806.1| MotA/TolQ/ExbB proton channel [Methylobacter tundripaludum SV96]
Length = 221
Score = 167 bits (424), Expect = 9e-40, Method: Composition-based stats.
Identities = 49/203 (24%), Positives = 87/203 (42%), Gaps = 4/203 (1%)
Query: 22 LAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHN 81
+ + + L FS+ +W+VI K F + R F FW L +
Sbjct: 9 VIINGTLYTLLAFSVATWTVIFFKIWEFTNNGYRNRRFNAAFWDAADLTHAESVPADTAI 68
Query: 82 IGLAAIFMSAMS---EWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSM 138
A I + E +++ K R + ++ + V + RE + L+ L S+
Sbjct: 69 GPQARIAQQGFAWLNESQQADGKHLRYIGAPAELLEHSLQVQMQREQHLMESGLTLLASI 128
Query: 139 SSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIPSSIAYN 197
S VG+ G VLG+M I S ++ + G I ++L++ +G+ V++P+ +AYN
Sbjct: 129 GSTSPFVGLFGTVLGIMHAMHEITASGSTSLDVVAGPIGDALVATAIGIAVAVPAVLAYN 188
Query: 198 KFIEDSKKFAMQMEGFANEFSAI 220
F+ K+ +E F F I
Sbjct: 189 FFLRRVKQQRAGLENFVTSFLHI 211
>gi|258543290|ref|YP_003188723.1| ExbB/TolQ/MotA [Acetobacter pasteurianus IFO 3283-01]
gi|256634368|dbj|BAI00344.1| ExbB/TolQ/MotA [Acetobacter pasteurianus IFO 3283-01]
gi|256637426|dbj|BAI03395.1| ExbB/TolQ/MotA [Acetobacter pasteurianus IFO 3283-03]
gi|256640478|dbj|BAI06440.1| ExbB/TolQ/MotA [Acetobacter pasteurianus IFO 3283-07]
gi|256643535|dbj|BAI09490.1| ExbB/TolQ/MotA [Acetobacter pasteurianus IFO 3283-22]
gi|256646590|dbj|BAI12538.1| ExbB/TolQ/MotA [Acetobacter pasteurianus IFO 3283-26]
gi|256649643|dbj|BAI15584.1| ExbB/TolQ/MotA [Acetobacter pasteurianus IFO 3283-32]
gi|256652631|dbj|BAI18565.1| ExbB/TolQ/MotA [Acetobacter pasteurianus IFO 3283-01-42C]
gi|256655687|dbj|BAI21614.1| ExbB/TolQ/MotA [Acetobacter pasteurianus IFO 3283-12]
Length = 258
Score = 167 bits (424), Expect = 1e-39, Method: Composition-based stats.
Identities = 55/216 (25%), Positives = 101/216 (46%), Gaps = 4/216 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
S + +F+ G V+C++ LL + S+L+W++ I KSV F+++RR+ R E+ +L
Sbjct: 23 FSPWEMFLNAGSVVQCVMALLALASLLTWTIFIAKSVEFLSIRRKLRTAEKTLEEAGTLA 82
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
K + + +A + A K G+++RI ++ A E +
Sbjct: 83 LGEKGTRQNS---IAHTLVMAAETEKAVSHDIPNDNEGLKERIVLHLERLEAAEGRRLMR 139
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVS 189
L ++ + +G+ G V G+M F IA + ++ V PGI E+L++ LGL +
Sbjct: 140 GTGLLATIGATSPFIGLFGTVWGIMTSFTGIAASKATSLAVVAPGIAEALLATALGLVAA 199
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
IP+ + YN S Q+ + ++SR
Sbjct: 200 IPAVVIYNHLARQSASCRAQVADLTSLIMRLVSRDL 235
>gi|219872226|ref|YP_002476601.1| biopolymer transport ExbB protein [Haemophilus parasuis SH0165]
gi|219692430|gb|ACL33653.1| biopolymer transport ExbB protein [Haemophilus parasuis SH0165]
Length = 222
Score = 167 bits (424), Expect = 1e-39, Method: Composition-based stats.
Identities = 45/215 (20%), Positives = 100/215 (46%), Gaps = 5/215 (2%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+++ L Q + + +L + SILSW++I+ + + I +R+ ++ QL S ++L
Sbjct: 1 MNLIQLLQQQDIVLSISFGILVVMSILSWTIILIRLIKMIGVRKNNQQSFQLVKSAENLT 60
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSE---WKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ ++N + +A I + ++ + +D + + AI + L +
Sbjct: 61 QAEQYIQNKRSE-IADILQLTFKQCELYQAKEKNHLSHQLPFKDFLTLHLRNAITQSLRK 119
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
L L S+ + +G+ G V G+ I+ ++ ++ I E+L++ +GL
Sbjct: 120 YDGGLVALASIGAVAPFIGLFGTVWGIFNALMDISQQGQVSIATVSAPIGEALVATAMGL 179
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
V+IP+ +AYN ++ + ++ +ANE L
Sbjct: 180 FVAIPAVLAYNLITRLNRNLSQDLDHYANELFIYL 214
>gi|319760467|ref|YP_004124405.1| protein TolQ [Candidatus Blochmannia vafer str. BVAF]
gi|318039181|gb|ADV33731.1| protein TolQ [Candidatus Blochmannia vafer str. BVAF]
Length = 256
Score = 167 bits (424), Expect = 1e-39, Method: Composition-based stats.
Identities = 64/223 (28%), Positives = 104/223 (46%), Gaps = 8/223 (3%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
++IF LF + + V+ LL IFSI+SWS+I + +R+ + FE FW+G L
Sbjct: 1 MNIFDLFFKTNMLVQFTTLLLIIFSIISWSIIFNRIFILKKEQRKLKLFEDRFWAGIELS 60
Query: 71 TVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ K + N N IF E+ K P + +R +M + ELE +
Sbjct: 61 NLYKEISNRRNRLNSSERIFFVGFKEFSKLYHIKNHLPEVVTNRTLCVMHNIMNIELEML 120
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA------GYYSNNVVSIPGIIESLISI 182
+ + +G + S +G+ G VLG++ F + ++ + PG+ E+LIS
Sbjct: 121 EKNVPLIGIIGSISPYIGLFGTVLGIIHVFLELGKITTEHTGGTHIQLIAPGVAEALIST 180
Query: 183 LLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+GL V+IP+ +A+N + F EF AIL RQ
Sbjct: 181 AIGLFVAIPAVMAFNYLTIQINTLSQSYNNFIEEFIAILYRQV 223
>gi|119896905|ref|YP_932118.1| biopolymer transport protein ExbB [Azoarcus sp. BH72]
gi|119669318|emb|CAL93231.1| probable biopolymer transport protein ExbB [Azoarcus sp. BH72]
Length = 253
Score = 167 bits (424), Expect = 1e-39, Method: Composition-based stats.
Identities = 47/218 (21%), Positives = 89/218 (40%), Gaps = 7/218 (3%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
L+ Q ++ + LL S+ SW +I+ R+ + FW+ L
Sbjct: 7 FGFAHLWGQSDAIIRTVAILLLAMSVTSWYLILV-RALRQLRARRSIDAVDAFWAASDLS 65
Query: 71 TVCKSLKNHHNIG----LAAIFMSAMSEWKKS-CDKGARSPIGIQDRIDRMMDVAIAREL 125
K L++ LA +A ++ + + + I R + +I+
Sbjct: 66 QGLKRLQDQAPDSPFDDLARQGAAAADHVRRHTHQETLGGKLDADEFITRALRKSISLST 125
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILL 184
+ L+ L S+ S VG+ G V G+ +I+ + + G + E+LI
Sbjct: 126 ARLEAGLTMLASIGSTAPFVGLFGTVWGIYHALVNISASGMATLDKVAGPVGEALIMTAF 185
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
GL V+IP+ +AYN F ++ +++ FA++ A S
Sbjct: 186 GLFVAIPAVLAYNAFTRANRVELSELDAFAHDLHAWFS 223
>gi|330994512|ref|ZP_08318437.1| Biopolymer transport protein exbB [Gluconacetobacter sp. SXCC-1]
gi|329758512|gb|EGG75031.1| Biopolymer transport protein exbB [Gluconacetobacter sp. SXCC-1]
Length = 246
Score = 167 bits (423), Expect = 1e-39, Method: Composition-based stats.
Identities = 54/221 (24%), Positives = 102/221 (46%), Gaps = 3/221 (1%)
Query: 6 LAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS 65
+ + S +A+F+ G V+C++TLL + S+L+W++ I KSV + +R + R EQ
Sbjct: 1 MTPISFSPWAMFLGAGPVVRCVMTLLAMASVLTWTLFIAKSVELLRVRLKLRRAEQALEQ 60
Query: 66 GQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
+L+ + N +A + A ++ G+++RI ++ A E
Sbjct: 61 ANTLDLGEEW--TRDNASIAHTLVMAAETERRCSADIPDDGEGLKERIVLHLERLEAAEG 118
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILL 184
+ L ++ + +G+ G V G+M F IA + ++ V PGI E+L++ L
Sbjct: 119 RRLLRGTGVLATIGATAPFIGLFGTVWGIMTSFTGIAASRATSLAVVAPGIAEALLATAL 178
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
GL +IP+ + YN + Q+ ++SR
Sbjct: 179 GLVAAIPAVVIYNHLARQAASCRAQVADLTALVMRLVSRDL 219
>gi|326319250|ref|YP_004236922.1| MotA/TolQ/ExbB proton channel [Acidovorax avenae subsp. avenae ATCC
19860]
gi|323376086|gb|ADX48355.1| MotA/TolQ/ExbB proton channel [Acidovorax avenae subsp. avenae ATCC
19860]
Length = 222
Score = 167 bits (423), Expect = 1e-39, Method: Composition-based stats.
Identities = 50/206 (24%), Positives = 90/206 (43%), Gaps = 2/206 (0%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
++ + + Q + LL SI SW VI+ K+ FW +LE
Sbjct: 1 MNAWHWWHQGDTVTRISALLLLAMSIASWVVILWKARLLRRAVAGVERSTAEFWRSPTLE 60
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQ-DRIDRMMDVAIARELEEIT 129
+ + L GL + A + + G+ + G + ++ R++ A+ R L +
Sbjct: 61 SARERLVPVDPDGLVRPLVDAAAGIANNAQAGSLAASGQRSQQLTRVLRDALHRVLARLQ 120
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCV 188
L ++ S VG+LG V G+ ++AG + ++ + G + E+L+ GL V
Sbjct: 121 FGQVLLATVGSTAPFVGLLGTVWGIYHALTALAGGGAVSIDRVAGPVGEALVMTAAGLAV 180
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFA 214
+IP+ +AYN F + +EGFA
Sbjct: 181 AIPAVLAYNLFGRWIGRVEADLEGFA 206
>gi|192290802|ref|YP_001991407.1| tonB-system energizer ExbB [Rhodopseudomonas palustris TIE-1]
gi|192284551|gb|ACF00932.1| tonB-system energizer ExbB [Rhodopseudomonas palustris TIE-1]
Length = 265
Score = 167 bits (423), Expect = 1e-39, Method: Composition-based stats.
Identities = 47/217 (21%), Positives = 93/217 (42%), Gaps = 5/217 (2%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S + +F+ V+ ++ L + S+ +W+V + KS+ + S +L
Sbjct: 42 DLSPWGMFLGADAVVRTVMVGLALASLAAWTVWLAKSIELRRSSAVAQRGLDRLESDITL 101
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+ + H+ +A + + E S G G ++R+ ++ A E
Sbjct: 102 QQAAAETADQHD-AVAQMIQTVDREASLS---GGAHDDGFRERVALRLERVEAAEARRAA 157
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCV 188
L S+ + VG+ G V G+M F I+ + N+ V PGI E+L++ LGL
Sbjct: 158 IGTGLLASIGAVAPFVGLFGTVWGIMNAFIGISKANTTNLAVVAPGIAEALLATALGLVA 217
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ + YN + + + + ++SR+
Sbjct: 218 AIPAVVIYNHLTRRVTAYRALLGDASTQLLLMISREA 254
>gi|167854591|ref|ZP_02477372.1| biopolymer transport ExbB protein [Haemophilus parasuis 29755]
gi|167854346|gb|EDS25579.1| biopolymer transport ExbB protein [Haemophilus parasuis 29755]
Length = 222
Score = 167 bits (423), Expect = 1e-39, Method: Composition-based stats.
Identities = 44/215 (20%), Positives = 100/215 (46%), Gaps = 5/215 (2%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+++ L Q + + +L + SILSW++I+ + + I +R+ ++ +L S ++L
Sbjct: 1 MNLIQLLQQQDIVLSISFGILVVMSILSWTIILIRLIKMIGIRKNNQQSFKLVKSAENLT 60
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSE---WKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ ++N + +A I + ++ + +D + + AI + L +
Sbjct: 61 QAEQYIQNKRSE-IADILQLTFKQCELYQAKEKNHLSHQLPFKDFLTLHLRNAITQSLRK 119
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
L L S+ + +G+ G V G+ I+ ++ ++ I E+L++ +GL
Sbjct: 120 YDGGLVALASIGAVAPFIGLFGTVWGIFNALMDISQQGQVSIATVSAPIGEALVATAMGL 179
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
V+IP+ +AYN ++ + ++ +ANE L
Sbjct: 180 FVAIPAVLAYNLITRLNRNLSQDLDHYANELFIYL 214
>gi|108762516|ref|YP_633890.1| MotA/TolQ/ExbB proton channel family protein [Myxococcus xanthus DK
1622]
gi|108466396|gb|ABF91581.1| transporter, MotA/TolQ/ExbB proton channel family [Myxococcus
xanthus DK 1622]
Length = 236
Score = 167 bits (423), Expect = 1e-39, Method: Composition-based stats.
Identities = 49/198 (24%), Positives = 92/198 (46%), Gaps = 8/198 (4%)
Query: 35 SILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSE 94
S+ SW++I K+ R Q F FW LE + ++ + L+ +F + E
Sbjct: 36 SVASWALIAMKASQLAKARAQSLTFLDTFWKASRLEAIYQTAQKLDGSPLSKVFCAGYEE 95
Query: 95 WKKSCDK-------GARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGI 147
K +G + ++R + A ++ E+ ++SFLG++ +A VG+
Sbjct: 96 LTKLAQAKEGGTEGALAERLGGIENVERALHRASTAQITELENRVSFLGTVGAASPFVGL 155
Query: 148 LGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIPSSIAYNKFIEDSKKF 206
G V+G++ F IA + + ++ + +L + GL +IP+ +AYN F+ K F
Sbjct: 156 FGTVIGILSAFNQIAEQGNATLATVAAPVGNALFATAAGLFAAIPAVVAYNSFVSRIKVF 215
Query: 207 AMQMEGFANEFSAILSRQ 224
+M F+ +F I+ R
Sbjct: 216 DTEMSNFSADFLNIIKRH 233
>gi|294010717|ref|YP_003544177.1| biopolymer transport protein ExbB [Sphingobium japonicum UT26S]
gi|292674047|dbj|BAI95565.1| biopolymer transport protein ExbB [Sphingobium japonicum UT26S]
Length = 252
Score = 166 bits (422), Expect = 1e-39, Method: Composition-based stats.
Identities = 48/221 (21%), Positives = 90/221 (40%), Gaps = 12/221 (5%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YGL Q G + +L S+ ++ ++ K + + Q ++
Sbjct: 15 NPYGL-------MEALEQGGTIAWTVFIILCGMSVGTFYILFTKLIEQQKVINQGKKVRA 67
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
FW SL+ L+ N I + ++ P+ D + + +
Sbjct: 68 TFWRAASLKEGTAKLE--KNSAYKQIVDDGIKAQEEHTK--LTDPVEAHDWLHGSLARSE 123
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLI 180
A ++ L+FL ++ S +G+ G V+G+ I ++ ++ G + E+LI
Sbjct: 124 ASINSKLGGGLAFLATVGSTSPFIGLFGTVIGIYRALIKIGAAGQASIDAVAGPVGEALI 183
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
LGL V++P+ +AYN +K A Q+ GF + A L
Sbjct: 184 MTALGLAVAVPAVLAYNFLQRRNKSIAEQLNGFTVDLLAHL 224
>gi|161525903|ref|YP_001580915.1| MotA/TolQ/ExbB proton channel [Burkholderia multivorans ATCC 17616]
gi|189349378|ref|YP_001945006.1| biopolymer transport protein [Burkholderia multivorans ATCC 17616]
gi|221213182|ref|ZP_03586157.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
multivorans CGD1]
gi|160343332|gb|ABX16418.1| MotA/TolQ/ExbB proton channel [Burkholderia multivorans ATCC 17616]
gi|189333400|dbj|BAG42470.1| biopolymer transport protein [Burkholderia multivorans ATCC 17616]
gi|221166634|gb|EED99105.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
multivorans CGD1]
Length = 222
Score = 166 bits (422), Expect = 1e-39, Method: Composition-based stats.
Identities = 48/214 (22%), Positives = 86/214 (40%), Gaps = 2/214 (0%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
+ + +L S+ SW ++ K+ + +RQ FW SLE
Sbjct: 7 VVHYLESGDAITHAVAYVLLAMSVASWCFLLMKAWLLVRAKRQGPRALAAFWRASSLEAG 66
Query: 73 CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSP-IGIQDRIDRMMDVAIARELEEITEK 131
+L + A + + A + + +R+ R + A+ R +
Sbjct: 67 IAALAGADRERVFVPLAEAARDAADEHEPAALAARVERSERVLRALRHAMLRSQRRLEFG 126
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSI 190
L S+ S VG+LG V G+ SIA + ++ G + E+LI GL V+I
Sbjct: 127 QVLLASIGSTAPFVGLLGTVWGIYHALGSIAASGQAQIENVAGPVGEALIMTAFGLVVAI 186
Query: 191 PSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
P+ +AYN ++ A +++GFA + + Q
Sbjct: 187 PAVLAYNILGRLVRQLAEELDGFARDLHVFVCAQ 220
>gi|300021817|ref|YP_003754428.1| MotA/TolQ/ExbB proton channel [Hyphomicrobium denitrificans ATCC
51888]
gi|299523638|gb|ADJ22107.1| MotA/TolQ/ExbB proton channel [Hyphomicrobium denitrificans ATCC
51888]
Length = 227
Score = 166 bits (422), Expect = 2e-39, Method: Composition-based stats.
Identities = 63/220 (28%), Positives = 109/220 (49%), Gaps = 12/220 (5%)
Query: 6 LAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS 65
+A D++I LF + VKCII L S++ W++ +K + + R+ ++ E+ +
Sbjct: 11 IAGRDLTILGLFQHADVVVKCIIVGLLSASVVCWAMTFEKLIRVWLVNREIKQLEKSSQT 70
Query: 66 GQSLETVCKSLKNHHNIGL-AAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARE 124
G +L + GL AI +A +EW + G+ ++DR++ M A R+
Sbjct: 71 G--------TLPAAKSSGLIRAIIDAARTEWTEGAHDGSTGE--VRDRLEIAMRSATKRQ 120
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISIL 183
L+ I + L FL ++ SA +G+ G V G+M F +IA ++ V PGI E+L +
Sbjct: 121 LKGIEQGLPFLATLGSAAPFIGLFGTVWGIMNSFTAIAQSKDTSLAVVAPGIAEALFATA 180
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
+GL +IP+ I YN+ + A + + LSR
Sbjct: 181 VGLAAAIPAVIFYNQITVALGRAADRAAPAIVGLARSLSR 220
>gi|221202475|ref|ZP_03575506.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
multivorans CGD2M]
gi|221208068|ref|ZP_03581073.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
multivorans CGD2]
gi|221171971|gb|EEE04413.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
multivorans CGD2]
gi|221177648|gb|EEE10064.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
multivorans CGD2M]
Length = 222
Score = 166 bits (422), Expect = 2e-39, Method: Composition-based stats.
Identities = 49/214 (22%), Positives = 87/214 (40%), Gaps = 2/214 (0%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
+ + +L SI SW ++ K+ + +RQ FW SLE+
Sbjct: 7 VVHYLESGDAITHAVAYVLLAMSIASWCFLLMKAWLLVRAKRQGPRALAAFWRASSLESG 66
Query: 73 CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSP-IGIQDRIDRMMDVAIARELEEITEK 131
+L + A + + A + + +R+ R + A+ R +
Sbjct: 67 IAALAGADRERVFVPLAEAARDAADEHEPAALAARVERSERVLRALRHAMLRSQRRLEFG 126
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSI 190
L S+ S VG+LG V G+ SIA + ++ G + E+LI GL V+I
Sbjct: 127 QVLLASIGSTAPFVGLLGTVWGIYHALGSIAASGQAQIENVAGPVGEALIMTAFGLVVAI 186
Query: 191 PSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
P+ +AYN ++ A +++GFA + + Q
Sbjct: 187 PAVLAYNILGRLVRQLAEELDGFARDLHVFVCAQ 220
>gi|325520277|gb|EGC99435.1| transport protein [Burkholderia sp. TJI49]
Length = 236
Score = 166 bits (422), Expect = 2e-39, Method: Composition-based stats.
Identities = 43/207 (20%), Positives = 95/207 (45%), Gaps = 6/207 (2%)
Query: 21 GLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHH 80
V+ + LL IFS+++W++I+ K++ + + R + + F + S + +
Sbjct: 7 TFIVQGALWLLVIFSVVTWTLIVVKAIQSLRASARNRRYTKAFRAANSFQEAAAL--DGA 64
Query: 81 NIGLAAIFMSAMSEWKKSCDKGARS---PIGIQDRIDRMMDVAIARELEEITEKLSFLGS 137
N + + + +++ + A D ++R + I L+ L S
Sbjct: 65 NSPASELAATGFDVLRRADEGSAHDLEHSWNRHDLLERHLRQQIQHARRREEAGLAVLAS 124
Query: 138 MSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIPSSIAY 196
+ S VG+ G V G++ +I S ++ + G I E+L++ +G+ V++P+ +AY
Sbjct: 125 IGSTAPFVGLFGTVFGIIHALTAITHSASASIDVVAGPIGEALVATGIGIAVAVPAVLAY 184
Query: 197 NKFIEDSKKFAMQMEGFANEFSAILSR 223
N F+ K + ++ FA +F + +
Sbjct: 185 NFFVRRVKAASADLDAFATDFVTLAQK 211
>gi|91790436|ref|YP_551388.1| MotA/TolQ/ExbB proton channel [Polaromonas sp. JS666]
gi|91699661|gb|ABE46490.1| MotA/TolQ/ExbB proton channel [Polaromonas sp. JS666]
Length = 214
Score = 166 bits (422), Expect = 2e-39, Method: Composition-based stats.
Identities = 52/213 (24%), Positives = 89/213 (41%), Gaps = 4/213 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
++ F+L Q G+ + + LL S+ SW VI+ K+ +FW S+E
Sbjct: 1 MNFFSLMTQGGVVSQLVAVLLLAMSVASWVVILWKAWLLHRALGDVARSTAVFWQSVSIE 60
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
+ + L + A + GA Q + R++ A+ L ++
Sbjct: 61 EASQKVAAFDREALVLPLIDATK-LRAIGTLGAAGDRAQQ--LTRVLRDALHAILHKLQF 117
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVS 189
L ++ S VG+LG V G+ IA + + G + E+LI GL V+
Sbjct: 118 GQVLLATVGSTAPFVGLLGTVWGIYHALIGIASAGQITIDKVSGPVGEALIMTAAGLAVA 177
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
IP+ +AYN F + +EGFA + +L+
Sbjct: 178 IPAVLAYNIFGRHIGRIEADLEGFARDLRELLA 210
>gi|319899357|ref|YP_004159454.1| biopolymer transport exbB protein [Bartonella clarridgeiae 73]
gi|319403325|emb|CBI76884.1| Biopolymer transport exbB protein [Bartonella clarridgeiae 73]
Length = 273
Score = 166 bits (422), Expect = 2e-39, Method: Composition-based stats.
Identities = 59/247 (23%), Positives = 106/247 (42%), Gaps = 23/247 (9%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
+ +++ D S F++FM VK +I L + S+LSW++ K V + + R Q
Sbjct: 11 DTVTVSMHDFSPFSMFMAADWVVKAVIIFLLLTSLLSWTIAFVKIVELTVAKYKARHALQ 70
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDK-------------------- 101
L S Q+L + S K + + + E + S
Sbjct: 71 LTKSAQTLAGLAASFKEIKGTAV-FLLEETLKEIRLSSQLVKSDDSNNNQCEAFSYDIFS 129
Query: 102 -GARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQS 160
G+ S G+++R+ ++ + + I + L ++ S VG+ V G+M F
Sbjct: 130 CGSISINGVKERVHSLLSRCLLAAMRRIACGTAILATIGSVAPFVGLFATVWGIMNSFIG 189
Query: 161 IAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
IA + + V PGI E+L++ +GL V+IP+ I YN FI + + A
Sbjct: 190 IAKSQTTRLDVVAPGIAEALLATAIGLFVAIPAVIIYNSFIRVLNGYRNDLADIAAAIER 249
Query: 220 ILSRQTE 226
++SR+ +
Sbjct: 250 LVSREFD 256
>gi|303326619|ref|ZP_07357061.1| TolQ protein [Desulfovibrio sp. 3_1_syn3]
gi|302862607|gb|EFL85539.1| TolQ protein [Desulfovibrio sp. 3_1_syn3]
Length = 229
Score = 166 bits (421), Expect = 2e-39, Method: Composition-based stats.
Identities = 52/215 (24%), Positives = 93/215 (43%), Gaps = 2/215 (0%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLET 71
S+ +Q L K ++ LL SI SW+ + K + +R+ E F L+
Sbjct: 3 SLIHAVLQATLISKFVLVLLLAMSIASWTYMCGKWLTLRAAQRRAHEGLSAFDKAGELKR 62
Query: 72 VCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEK 131
+ L I A+ E+ + G + + D + R + IA E+ ++
Sbjct: 63 ALPIVAADERSPLYGITRRAVREYNRITRTGDTERL-LNDNVRRALHFGIAEEIAKLKSS 121
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCVSI 190
L+ L + ++ +G+ G V G+M F +IA S ++ ++ PGI E+LI+ +GL V+I
Sbjct: 122 LALLATAANTAPFIGLFGTVWGIMHSFTAIAKMKSVSLATVAPGIAEALIATAVGLFVAI 181
Query: 191 PSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
P+ YN F +A + L +
Sbjct: 182 PAVCGYNMFRAKLTGIEGVCINYAGQLLNRLQHEA 216
>gi|237654176|ref|YP_002890490.1| MotA/TolQ/ExbB proton channel [Thauera sp. MZ1T]
gi|237625423|gb|ACR02113.1| MotA/TolQ/ExbB proton channel [Thauera sp. MZ1T]
Length = 253
Score = 166 bits (421), Expect = 2e-39, Method: Composition-based stats.
Identities = 45/215 (20%), Positives = 88/215 (40%), Gaps = 7/215 (3%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+ L+ Q ++ + +L + SI SW +I+ +S+ + R E FW+ L+
Sbjct: 7 FGLAHLWAQSDNIIRAVALILLVMSITSWYLILSRSLRQLRARSHSGAVE-AFWAAPDLD 65
Query: 71 TVCKSLKNHHNIG-----LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
+ L +A + + + + I R + +IA
Sbjct: 66 AGLRVLAERAPESPFEALAQQGAAAAQHVRRHTHSNTLGGKLDTDEVITRALRKSIALST 125
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILL 184
+ L+ L S+ S VG+ G V G+ +I+ + + G + E+LI
Sbjct: 126 AALESGLTVLASIGSTAPFVGLFGTVWGIYHALVNISVSGMATLDKVAGPVGEALIMTAF 185
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
GL V+IP+ +AYN ++ +++ FA++ A
Sbjct: 186 GLFVAIPAVLAYNGITRANRVELSELDAFAHDLHA 220
>gi|39935196|ref|NP_947472.1| putative enterochelin uptake protein ExbB [Rhodopseudomonas
palustris CGA009]
gi|39649047|emb|CAE27568.1| putative exbB, uptake of enterochelin; tonB-dependent uptake of B
colicins [Rhodopseudomonas palustris CGA009]
Length = 265
Score = 166 bits (421), Expect = 2e-39, Method: Composition-based stats.
Identities = 47/217 (21%), Positives = 94/217 (43%), Gaps = 5/217 (2%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+S + +F+ V+ ++ L + S+ +W+V + KS+ + + S +L
Sbjct: 42 DLSPWGMFLGADAVVRTVMVGLALASLAAWTVWLAKSIELRRSVAVAQRGLERLESDVTL 101
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+ + H+ +A + + E S G G ++R+ ++ A E
Sbjct: 102 QQAAAETADQHD-AVAQMIQTVDREASLS---GGAHDDGFRERVALRLERVEAAEARRAA 157
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCV 188
L S+ + VG+ G V G+M F I+ + N+ V PGI E+L++ LGL
Sbjct: 158 IGTGLLASIGAVAPFVGLFGTVWGIMNAFIGISKANTTNLAVVAPGIAEALLATALGLVA 217
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ + YN + + + + ++SR+
Sbjct: 218 AIPAVVIYNHLTRRVTAYRALLGDASTQLLLMISREA 254
>gi|171058255|ref|YP_001790604.1| MotA/TolQ/ExbB proton channel [Leptothrix cholodnii SP-6]
gi|170775700|gb|ACB33839.1| MotA/TolQ/ExbB proton channel [Leptothrix cholodnii SP-6]
Length = 266
Score = 166 bits (421), Expect = 2e-39, Method: Composition-based stats.
Identities = 48/213 (22%), Positives = 96/213 (45%), Gaps = 5/213 (2%)
Query: 15 ALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCK 74
Q K ++ +L + S+ SW++I+ K + + +R+ +F FW+ +SL+ V
Sbjct: 26 HFIAQSDAVGKTLLAVLVLMSVASWALILIKGLTQLIRQRRSGQFLNFFWNARSLDEVSA 85
Query: 75 SLKNH----HNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
++ H LAA + A + + + Q+ + R + + E +
Sbjct: 86 EIQTHGARDPFGHLAAHAIHAQAHHARYGAAKLQEAGTSQEFVTRTIKKVLDEETTRLEN 145
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVS 189
L+ L ++ + VG+ G V G+ +I + + + G + E+LI +GL V+
Sbjct: 146 GLTTLATIGATAPFVGLFGTVWGVYHALLAIGMSGAGTLDKVAGPVGEALIMTGIGLAVA 205
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
IP+ +AYN ++ +++ FA E LS
Sbjct: 206 IPAVMAYNAISRSNRVLNARLDAFAFELLTFLS 238
>gi|124514215|gb|EAY55730.1| putative MotA/TolQ/ExbB proton channel [Leptospirillum rubarum]
gi|206602335|gb|EDZ38816.1| Putative MotA/TolQ/ExbB proton channel [Leptospirillum sp. Group II
'5-way CG']
Length = 223
Score = 166 bits (421), Expect = 2e-39, Method: Composition-based stats.
Identities = 50/219 (22%), Positives = 97/219 (44%), Gaps = 5/219 (2%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+++F Q+ + ++++L S LSW ++ K ++ R+F F
Sbjct: 1 MTLFNFLSQVSPMAEAVLSVLLFLSALSWGIVFYKLYIVSRSVKENRQFVMAFKRTDRFS 60
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDK----GARSPIGIQDRIDRMMDVAIARELE 126
+ + + LA IF + + + DK G +S D I R + A E
Sbjct: 61 RLYQEAVAYRKSTLAFIFRAGYEKVQALKDKWMVAGGKSSEMDLDVIHRTLLQASQEEQA 120
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV-SIPGIIESLISILLG 185
+ L L + ++ VG+LG V G++ F+ I+ S ++ PGI ++L++ G
Sbjct: 121 RLEAYLPVLATTANIAPFVGLLGTVWGIIHAFRDISHQASASIASVAPGIADALVTTAAG 180
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
L +IP+ I YN F++ ++ + F E ++S +
Sbjct: 181 LFTAIPAVIFYNYFLQKIRQIQGVADTFTLEILNVVSEE 219
>gi|148253728|ref|YP_001238313.1| biopolymer transport [Bradyrhizobium sp. BTAi1]
gi|146405901|gb|ABQ34407.1| outer membrane transport energization protein ExbB [Bradyrhizobium
sp. BTAi1]
Length = 258
Score = 166 bits (421), Expect = 2e-39, Method: Composition-based stats.
Identities = 51/217 (23%), Positives = 97/217 (44%), Gaps = 5/217 (2%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+S + +F+Q + VK ++ L + S+ +W+V++ K++ R R + SL
Sbjct: 17 LSPWTMFLQADMVVKAVMIGLALASVATWTVLVVKTIQLRAALRVARVALGTAVTAHSLA 76
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
S + + + A E KS A GI++R+ + A + I
Sbjct: 77 NAAGSESAQEGV-VGRLLAVAEDEIDKSRGLPAD---GIKERVAWQFERVEAAAVARIGR 132
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVS 189
+ L ++ + VG+ G V G+M F I+ ++ N+ V PGI E+L++ GL +
Sbjct: 133 GIGILATVGAVAPFVGLFGTVWGIMNSFIGISHAHTTNLAVVAPGIAEALLATAFGLAAA 192
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
IP+ + YN F + + + + +LSR +
Sbjct: 193 IPAVVIYNLFARATGGYRAVIADASVAVMRLLSRDLD 229
>gi|107021729|ref|YP_620056.1| MotA/TolQ/ExbB proton channel [Burkholderia cenocepacia AU 1054]
gi|116688675|ref|YP_834298.1| MotA/TolQ/ExbB proton channel [Burkholderia cenocepacia HI2424]
gi|105891918|gb|ABF75083.1| MotA/TolQ/ExbB proton channel [Burkholderia cenocepacia AU 1054]
gi|116646764|gb|ABK07405.1| MotA/TolQ/ExbB proton channel [Burkholderia cenocepacia HI2424]
Length = 222
Score = 166 bits (421), Expect = 2e-39, Method: Composition-based stats.
Identities = 46/214 (21%), Positives = 84/214 (39%), Gaps = 2/214 (0%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
+ + +L S+ SW + K+ + +RQ FW SL+
Sbjct: 7 VVHYLESGDAITHAVSYVLLAMSVASWCFLFMKAWLLVRAKRQGPRALAAFWRAPSLDAG 66
Query: 73 CKSLKNHHNIGL-AAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEK 131
+L + + +A + + +R+ R + A+ R +
Sbjct: 67 IAALAGADRERVFVPLAEAARDAADDHDPTALAARVERSERVLRALRHAMLRSQRRLEFG 126
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSI 190
L S+ S VG+LG V G+ SIA + ++ G + E+LI GL V+I
Sbjct: 127 QVLLASIGSTAPFVGLLGTVWGIYHALGSIAASGQAQIENVAGPVGEALIMTAFGLVVAI 186
Query: 191 PSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
P+ +AYN ++ A +++GFA + + Q
Sbjct: 187 PAVLAYNILGRLVRQLAEELDGFARDLHVFVCAQ 220
>gi|301630152|ref|XP_002944191.1| PREDICTED: biopolymer transport protein exbB-like [Xenopus
(Silurana) tropicalis]
Length = 220
Score = 166 bits (420), Expect = 3e-39, Method: Composition-based stats.
Identities = 49/214 (22%), Positives = 87/214 (40%), Gaps = 2/214 (0%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+ + + Q + LLF S+ SW VI+ K FW SL
Sbjct: 1 MDLLHWWRQGDAVTQVTALLLFAMSVASWVVILWKLRLLRRASADLPRAIAAFWQTASLA 60
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQ-DRIDRMMDVAIARELEEIT 129
+ L A + G+ + G + ++ R++ A+ L +
Sbjct: 61 DGVNRVPPFDRESLVLPLARAAHTLAAAAPSGSLAAQGSRAQQLTRVLRDALHGVLGRLQ 120
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCV 188
L ++ S VG+LG V G+ +IAG + + G + E+L+ GL V
Sbjct: 121 WGQVLLATVGSTAPFVGLLGTVWGIYHALATIAGAGQITIERVAGPVGEALVMTAAGLAV 180
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
+IP+ +AYN + + + ++EGFA + A+L+
Sbjct: 181 AIPAVLAYNVYGRIAGRIEAELEGFAYDLRALLA 214
>gi|83312649|ref|YP_422913.1| biopolymer transport protein [Magnetospirillum magneticum AMB-1]
gi|82947490|dbj|BAE52354.1| Biopolymer transport protein [Magnetospirillum magneticum AMB-1]
Length = 266
Score = 165 bits (419), Expect = 3e-39, Method: Composition-based stats.
Identities = 52/227 (22%), Positives = 94/227 (41%), Gaps = 11/227 (4%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YGL AL+ Q K + +L + S+ SW +++ K + L R +
Sbjct: 42 NPYGLD-------ALWAQGDFVSKGTLIILALMSMASWYILVVKLIEQSRLMRHAKAAAA 94
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
FW S+ ++L A SA E + + I + + + A+
Sbjct: 95 GFWKAASVADGARALAEDSPFRFVA---SAGMEAAQHHEGALTEKIDLNTWVTMSIQRAV 151
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLI 180
+ E+ L+ L ++ S VG+ G V G+ +I + + G + E+LI
Sbjct: 152 GEIVSELQGGLAVLATVGSTAPFVGLFGTVWGIYHALTAIGIAGQAAIDKVAGPVGEALI 211
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEG 227
GL V++P+ + YN + +K A ++ FA + A+L + G
Sbjct: 212 MTAFGLAVAVPAVLGYNLLVRRNKLAAEKVRAFAADLHAVLLAGSSG 258
>gi|319791129|ref|YP_004152769.1| mota/tolq/exbb proton channel [Variovorax paradoxus EPS]
gi|315593592|gb|ADU34658.1| MotA/TolQ/ExbB proton channel [Variovorax paradoxus EPS]
Length = 231
Score = 165 bits (419), Expect = 3e-39, Method: Composition-based stats.
Identities = 51/212 (24%), Positives = 87/212 (41%), Gaps = 5/212 (2%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+S+ L + + LL SI SW VI+ K+ R FW +L
Sbjct: 1 MSVLELLTHGDGVSRSVAALLLAMSIASWVVILWKTWLLRGGTRDVLRSIAAFWQSATLA 60
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQ-DRIDRMMDVAIARELEEIT 129
+ L+ L + A+ G + R+ R++ A+ L +
Sbjct: 61 DAEQKLQAFDRAALVLPAVVAIKNAAAVNVNGTLGATADRNQRLTRVLRDALHGALRRLQ 120
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYY---SNNVVSIPGIIESLISILLGL 186
L ++ + VG+LG V G+ G IAG + + V+ P + E+L+ GL
Sbjct: 121 AGQILLATVGATAPFVGLLGTVWGIYGALTGIAGQTGGFTIDKVAGP-VGEALVMTAFGL 179
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFS 218
V+IP+ +AYN F + ++EGFA++
Sbjct: 180 AVAIPAVLAYNVFGRVIGRIEAELEGFAHDLL 211
>gi|170731972|ref|YP_001763919.1| MotA/TolQ/ExbB proton channel [Burkholderia cenocepacia MC0-3]
gi|254246339|ref|ZP_04939660.1| MotA/TolQ/ExbB proton channel [Burkholderia cenocepacia PC184]
gi|124871115|gb|EAY62831.1| MotA/TolQ/ExbB proton channel [Burkholderia cenocepacia PC184]
gi|169815214|gb|ACA89797.1| MotA/TolQ/ExbB proton channel [Burkholderia cenocepacia MC0-3]
Length = 222
Score = 165 bits (419), Expect = 3e-39, Method: Composition-based stats.
Identities = 45/214 (21%), Positives = 83/214 (38%), Gaps = 2/214 (0%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
+ + +L S+ SW + K+ + +RQ FW SL+
Sbjct: 7 VVHYLESGDAITHAVSYVLLAMSVASWCFLFMKAWLLVRAKRQGPRALAAFWRAPSLDAG 66
Query: 73 CKSLKNHHNIGL-AAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEK 131
+L + + +A + + +R+ R + A+ +
Sbjct: 67 IAALAGADRERVFVPLAEAARDAADDHDPTALAARVERSERVLRALRHAMLHSQRRLEFG 126
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSI 190
L S+ S VG+LG V G+ SIA + ++ G + E+LI GL V+I
Sbjct: 127 QVLLASIGSTAPFVGLLGTVWGIYHALGSIAASGQAQIENVAGPVGEALIMTAFGLVVAI 186
Query: 191 PSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
P+ +AYN ++ A +++GFA + + Q
Sbjct: 187 PAVLAYNILGRLVRQLAEELDGFARDLHVFVCAQ 220
>gi|206561712|ref|YP_002232477.1| putative transport-related membrane protein [Burkholderia
cenocepacia J2315]
gi|198037754|emb|CAR53698.1| putative transport-related membrane protein [Burkholderia
cenocepacia J2315]
Length = 222
Score = 165 bits (419), Expect = 3e-39, Method: Composition-based stats.
Identities = 47/214 (21%), Positives = 84/214 (39%), Gaps = 2/214 (0%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
+ + +L S+ SW + K+ I +RQ FW SL+
Sbjct: 7 VVHYLESGDAITHAVSYVLLAMSVASWCFLFMKAWLLIRAKRQGPRALAAFWRAPSLDAG 66
Query: 73 CKSLKNHHNIGL-AAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEK 131
+L + + +A + + +R+ R + A+ R +
Sbjct: 67 IAALAGADRERVFVPLAEAARDAADDHDPAALAARVERSERVLRALRHAMLRSQRRLEFG 126
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSI 190
L S+ S VG+LG V G+ SIA + ++ G + E+LI GL V+I
Sbjct: 127 QVLLASIGSTAPFVGLLGTVWGIYHALGSIAASGQAQIENVAGPVGEALIMTAFGLVVAI 186
Query: 191 PSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
P+ +AYN ++ A +++GFA + + Q
Sbjct: 187 PAVLAYNILGRLVRQLAEELDGFARDLHVFVCAQ 220
>gi|94967180|ref|YP_589228.1| MotA/TolQ/ExbB proton channel [Candidatus Koribacter versatilis
Ellin345]
gi|94549230|gb|ABF39154.1| outer membrane transport energization protein ExbB [Candidatus
Koribacter versatilis Ellin345]
Length = 251
Score = 165 bits (419), Expect = 4e-39, Method: Composition-based stats.
Identities = 52/216 (24%), Positives = 105/216 (48%), Gaps = 5/216 (2%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG---QSL 69
+L+ QMG+ K ++ +LFI S S V+I +++ F R+Q R F +
Sbjct: 32 PVSLWKQMGILAKIVVIILFIMSGWSIGVMIDRALAFSAARKQSRAFAPAVAGALREGKI 91
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+ + + + LA + + + E+ K+ + A P + R ++ A A E+
Sbjct: 92 DEAIRVAERNKKSHLAKVVTAGLQEF-KAHGESADIPGEQIEASKRALERAEAIVHAELK 150
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCV 188
LS L ++ + VG+ G V+G++ F+SI+ + + GI E+L++ +GL V
Sbjct: 151 RGLSGLATIGATAPFVGLFGTVVGILNAFRSISQNKATGLGAVAGGISEALVTTAIGLFV 210
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+IP+ + +N F + F ++M+ ++E ++
Sbjct: 211 AIPAVMMFNYFTGKVEAFDVEMDNSSSELIDYFLKR 246
>gi|332186771|ref|ZP_08388513.1| motA/TolQ/ExbB proton channel family protein [Sphingomonas sp. S17]
gi|332013104|gb|EGI55167.1| motA/TolQ/ExbB proton channel family protein [Sphingomonas sp. S17]
Length = 266
Score = 165 bits (419), Expect = 4e-39, Method: Composition-based stats.
Identities = 49/222 (22%), Positives = 94/222 (42%), Gaps = 12/222 (5%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YGL + GL + + T+L + SI+S+ ++ K + Q + Q
Sbjct: 17 NPYGLGQA-------LKEGGLISQSVFTILCLMSIVSFYILFSKLFEQQKIINQAKRVRQ 69
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
FWS SL L+ N I ++ + P+ D + + +
Sbjct: 70 SFWSSNSLREGSAKLE--KNSAYKQIVDDGLA--AQDQHSKLTDPVEAHDWLHGSLARSE 125
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLI 180
A ++ L+FL ++ + +G+ G V+G+ I ++ ++ G + E+LI
Sbjct: 126 AAINSKLGGGLAFLATVGATAPFIGLFGTVIGIYRALIKIGSSGQASIDAVAGPVGEALI 185
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
LGL V++P+ +A+N +K A + F+N+ L+
Sbjct: 186 MTALGLVVAVPAVLAFNWLQRRNKSIAEDLSSFSNDVLGFLA 227
>gi|94495911|ref|ZP_01302490.1| MotA/TolQ/ExbB proton channel [Sphingomonas sp. SKA58]
gi|94424603|gb|EAT09625.1| MotA/TolQ/ExbB proton channel [Sphingomonas sp. SKA58]
Length = 251
Score = 165 bits (419), Expect = 4e-39, Method: Composition-based stats.
Identities = 47/221 (21%), Positives = 88/221 (39%), Gaps = 12/221 (5%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YGL Q G + +L S+ ++ ++ K + + Q ++
Sbjct: 14 NPYGL-------MEALEQGGTIAWTVFIILCAMSVGTFYILFTKLIEQQKVISQGKKVRA 66
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
FW SL L+ N I + ++ + P+ D + + +
Sbjct: 67 TFWRSASLREASAKLE--KNSAYKQIVDDGIKAQEEHGK--LKDPVEAHDWLHGSLARSE 122
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLI 180
+ L+FL ++ S +G+ G V+G+ I ++ ++ G + E+LI
Sbjct: 123 GAINSSLNGGLAFLATVGSTSPFIGLFGTVIGIYRALIKIGAAGQASIDAVAGPVGEALI 182
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
LGL V++P+ +AYN +K A Q+ GF + A L
Sbjct: 183 MTALGLAVAVPAVLAYNFLQRRNKAIAEQLNGFTVDLLAYL 223
>gi|53802322|ref|YP_112972.1| MotA/TolQ/ExbB proton channel family protein [Methylococcus
capsulatus str. Bath]
gi|53756083|gb|AAU90374.1| MotA/TolQ/ExbB proton channel family protein [Methylococcus
capsulatus str. Bath]
Length = 218
Score = 165 bits (419), Expect = 4e-39, Method: Composition-based stats.
Identities = 53/208 (25%), Positives = 97/208 (46%), Gaps = 4/208 (1%)
Query: 22 LAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHN 81
L + + +L FS+L+W+VI+ K + R FE+ FWS SL+ +
Sbjct: 8 LIINVTLWVLISFSVLTWTVILLKGGQYWRHAVGNRLFEEKFWSAASLDEARLRMDEAGG 67
Query: 82 IGLAAIFMSAMSEWKKSCDKGARS---PIGIQDRIDRMMDVAIARELEEITEKLSFLGSM 138
L + + + GA S + ++R + + RE L+ L S+
Sbjct: 68 CPLYRLASAGFQVFDSGNGNGAASLKHRGDLVATLERKLKRQLERESRLSDIGLTVLASI 127
Query: 139 SSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIPSSIAYN 197
S VG+ G V G+M Q I+ ++ + G I E+LI+ +G+ V++P+ +AYN
Sbjct: 128 GSTAPFVGLFGTVWGIMHALQDISRSGKASLEVVAGPIGEALIATAIGIAVAVPAVLAYN 187
Query: 198 KFIEDSKKFAMQMEGFANEFSAILSRQT 225
+ S++ +E FA +F +++ +T
Sbjct: 188 FLMRRSRRKQQALEIFAEDFLHLVAAET 215
>gi|121591677|ref|ZP_01678911.1| tolQ protein [Vibrio cholerae 2740-80]
gi|121546462|gb|EAX56686.1| tolQ protein [Vibrio cholerae 2740-80]
Length = 165
Score = 165 bits (418), Expect = 4e-39, Method: Composition-based stats.
Identities = 45/160 (28%), Positives = 78/160 (48%), Gaps = 3/160 (1%)
Query: 69 LETVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
L + + +K + G+ IF + +E+ + +P + + R M VA+ARE++
Sbjct: 1 LGALYQDVKKRKDDIYGIEEIFYAGFTEFARLRKTNPGAPDFVMEGTGRAMRVAVAREVD 60
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLG 185
+ L FL ++ S +G+ G V G+M F ++ + + PGI E+LI+ +G
Sbjct: 61 SLETSLPFLATVGSISPYIGLFGTVWGIMHAFIALGEVKQATLAMVAPGIAEALIATAIG 120
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
L +IP+ +AYN+ K F+ EF IL RQ
Sbjct: 121 LFAAIPAVMAYNRLSNKVSKLEHTYATFSEEFHTILHRQV 160
>gi|254253257|ref|ZP_04946575.1| Biopolymer transport protein [Burkholderia dolosa AUO158]
gi|124895866|gb|EAY69746.1| Biopolymer transport protein [Burkholderia dolosa AUO158]
Length = 222
Score = 165 bits (418), Expect = 4e-39, Method: Composition-based stats.
Identities = 47/214 (21%), Positives = 85/214 (39%), Gaps = 2/214 (0%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
+ + +L SI SW ++ K+ + +RQ FW SL+
Sbjct: 7 VVHYLESGDAITHAVAYVLLAMSIASWCFLLMKAWLLVRAKRQGPRALAAFWRASSLDAG 66
Query: 73 CKSLKNHHNIGL-AAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEK 131
+L + + +A + + +R+ R + A+ R +
Sbjct: 67 IAALAGADRERVFVPLAEAARDAADDHDPAALAARVERSERVLRALRHAMLRSQRRLEFG 126
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSI 190
L S+ S VG+LG V G+ SIA + ++ G + E+LI GL V+I
Sbjct: 127 QVLLASIGSTAPFVGLLGTVWGIYHALGSIAASGQAQIENVAGPVGEALIMTAFGLVVAI 186
Query: 191 PSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
P+ +AYN ++ A +++GFA + + Q
Sbjct: 187 PAVLAYNILGRLVRQLAEELDGFARDLHVFVCAQ 220
>gi|332559388|ref|ZP_08413710.1| biopolymer transport protein, ExbB [Rhodobacter sphaeroides WS8N]
gi|332277100|gb|EGJ22415.1| biopolymer transport protein, ExbB [Rhodobacter sphaeroides WS8N]
Length = 219
Score = 164 bits (417), Expect = 6e-39, Method: Composition-based stats.
Identities = 49/213 (23%), Positives = 98/213 (46%), Gaps = 3/213 (1%)
Query: 16 LFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKS 75
+F V+ ++ LL S ++W+V++ K V RR+ + +L+ +
Sbjct: 1 MFEAAHWVVQAVMILLAAASFVTWTVLLFKLVEIAIARRRLARTAATVETSATLDEAVRR 60
Query: 76 LKNHHNIGLAAIFMSAMSEWKKS-CDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSF 134
L + A + ++ E ++S G+++R+ +++ A+ E + +
Sbjct: 61 LAGRKD-PAAFMARASFEELQRSDAALDLAGTAGLKERVRSILERVEAQAGERLRRGIGL 119
Query: 135 LGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSS 193
L ++ S G VG+ G V G+M F I+ + N+ V PGI E+L++ LGL +IP+
Sbjct: 120 LATIGSVGPFVGLFGTVWGIMNAFIGISQSQTTNLAVVAPGIAEALLATGLGLVAAIPAV 179
Query: 194 IAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+ YN F+ + + + +LSR +
Sbjct: 180 VIYNHFVRSIASWRLSLADAGAAIERMLSRDLD 212
>gi|261855192|ref|YP_003262475.1| MotA/TolQ/ExbB proton channel [Halothiobacillus neapolitanus c2]
gi|261835661|gb|ACX95428.1| MotA/TolQ/ExbB proton channel [Halothiobacillus neapolitanus c2]
Length = 237
Score = 164 bits (416), Expect = 7e-39, Method: Composition-based stats.
Identities = 51/217 (23%), Positives = 94/217 (43%), Gaps = 5/217 (2%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
+ +L+ Q L ++ + LL S+L+W ++Q+ + LR R FEQ FW Q
Sbjct: 2 PHSFDLASLWQQSDLIIRSVALLLLAMSVLTWFYVLQRLSFMLRLRGVSRRFEQ-FWHTQ 60
Query: 68 SLETVCKSLKNH-HNIGLAAIFMSAMS--EWKKSCDKGARSPIGIQDRIDRMMDVAIARE 124
L H + SA+ E S S + + + + + I
Sbjct: 61 GYSEGLALLGKPGHINPFRTLADSAVEAVEHYYSHSTDLHSQLPLSEWLSLSLTSKIDDI 120
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISIL 183
E + +S L S+ + +G+ G V G+ ++I S N+ +I G + E+L+
Sbjct: 121 QEFFRQGMSALASIGAVAPFIGLFGTVWGIYHALENIGQTGSANLATIAGPVGEALVMTA 180
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAI 220
GL V+IP+ +AYN +++ +++ FA +
Sbjct: 181 FGLAVAIPAVLAYNAINRQNRQLIARVQRFAQQLHTY 217
>gi|89899566|ref|YP_522037.1| MotA/TolQ/ExbB proton channel [Rhodoferax ferrireducens T118]
gi|89344303|gb|ABD68506.1| MotA/TolQ/ExbB proton channel [Rhodoferax ferrireducens T118]
Length = 217
Score = 164 bits (416), Expect = 8e-39, Method: Composition-based stats.
Identities = 50/215 (23%), Positives = 83/215 (38%), Gaps = 4/215 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
++ LF Q + + LL S+ SW VI+ K+ FWS S+
Sbjct: 1 MNAAQLFWQGDTLTRGVALLLLAMSVGSWVVIVWKAWLLRRASADVVRSLAAFWSSISVA 60
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
L+ L + A K + S ++ R++ A+ L ++
Sbjct: 61 EALHKLQAFDREALVIPMIVA---TKLEANGTLSSAGDKSQQLTRVLRDALHAALTKLHY 117
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVS 189
L ++ + VG+LG V G+ IA + I G + E+LI GL V+
Sbjct: 118 GQVLLATVGATAPFVGLLGTVWGIYHALIGIANAGQVTIDKISGPVGEALIMTAAGLAVA 177
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
IP+ + YN + Q+EGFA + + Q
Sbjct: 178 IPAVLGYNVLGRVIGRIEAQLEGFARDLRELAGTQ 212
>gi|15677575|ref|NP_274732.1| biopolymer transport protein [Neisseria meningitidis MC58]
gi|121635363|ref|YP_975608.1| biopolymer transport protein [Neisseria meningitidis FAM18]
gi|218768741|ref|YP_002343253.1| biopolymer transport protein [Neisseria meningitidis Z2491]
gi|254805477|ref|YP_003083698.1| MotA/TolQ/ExbB proton channel family protein [Neisseria
meningitidis alpha14]
gi|54037072|sp|P64100|EXBB_NEIMB RecName: Full=Biopolymer transport protein exbB
gi|54040986|sp|P64099|EXBB_NEIMA RecName: Full=Biopolymer transport protein exbB
gi|7226984|gb|AAF42074.1| biopolymer transport protein ExbB [Neisseria meningitidis MC58]
gi|120867069|emb|CAM10834.1| biopolymer transport protein [Neisseria meningitidis FAM18]
gi|121052749|emb|CAM09093.1| biopolymer transport protein [Neisseria meningitidis Z2491]
gi|254669019|emb|CBA07428.1| MotA/TolQ/ExbB proton channel family protein [Neisseria
meningitidis alpha14]
gi|254671783|emb|CBA09642.1| MotA/TolQ/ExbB proton channel family protein [Neisseria
meningitidis alpha153]
gi|254672764|emb|CBA06802.1| MotA/TolQ/ExbB proton channel family protein [Neisseria
meningitidis alpha275]
gi|261392051|emb|CAX49543.1| biopolymer transport ExbB protein [Neisseria meningitidis 8013]
gi|308389847|gb|ADO32167.1| biopolymer transport protein [Neisseria meningitidis alpha710]
gi|316985741|gb|EFV64686.1| motA/TolQ/ExbB proton channel family protein [Neisseria
meningitidis H44/76]
gi|319410977|emb|CBY91373.1| biopolymer transport ExbB protein [Neisseria meningitidis WUE 2594]
gi|325128734|gb|EGC51597.1| biopolymer transport protein ExbB [Neisseria meningitidis N1568]
gi|325132784|gb|EGC55464.1| biopolymer transport protein ExbB [Neisseria meningitidis M6190]
gi|325133615|gb|EGC56273.1| biopolymer transport protein ExbB [Neisseria meningitidis M13399]
gi|325135669|gb|EGC58283.1| biopolymer transport protein ExbB [Neisseria meningitidis M0579]
gi|325138866|gb|EGC61417.1| biopolymer transport protein ExbB [Neisseria meningitidis ES14902]
gi|325145083|gb|EGC67366.1| biopolymer transport protein ExbB [Neisseria meningitidis
M01-240013]
gi|325198820|gb|ADY94276.1| biopolymer transport protein ExbB [Neisseria meningitidis G2136]
gi|325199682|gb|ADY95137.1| biopolymer transport protein ExbB [Neisseria meningitidis H44/76]
gi|325201621|gb|ADY97075.1| biopolymer transport protein ExbB [Neisseria meningitidis
M01-240149]
gi|325204684|gb|ADZ00138.1| biopolymer transport protein ExbB [Neisseria meningitidis
M01-240355]
gi|325205561|gb|ADZ01014.1| biopolymer transport protein ExbB [Neisseria meningitidis
M04-240196]
gi|325208644|gb|ADZ04096.1| biopolymer transport protein ExbB [Neisseria meningitidis NZ-05/33]
Length = 220
Score = 164 bits (416), Expect = 8e-39, Method: Composition-based stats.
Identities = 34/219 (15%), Positives = 95/219 (43%), Gaps = 3/219 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+++ +F + + L+ + SI++W +++ + + R+ ++ SL
Sbjct: 1 MNLKLVFESGDPVLIGVFVLMLLMSIVTWCLVVLRCIKLYRARKGNAAVKRHMRDTLSLN 60
Query: 71 TVCKSLK--NHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ ++ + LA + + ++++ + + + + + ++A+ +
Sbjct: 61 DAVEKVRAVDAPLSKLAQEALQSYRNYRRNEASELAQALPLNEYLVIQIRNSMAQIMRRF 120
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLC 187
++ L S+ + +G+ G V G+ +I ++ ++ G I E+L++ GL
Sbjct: 121 DYGMTALASIGATAPFIGLFGTVWGIYHALINIGQSGQMSIAAVAGPIGEALVATAAGLF 180
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
V+IP+ +AYN +K ++ A++ L Q +
Sbjct: 181 VAIPAVLAYNFLNRGTKILTQDLDAMAHDLHVRLLNQKD 219
>gi|319407712|emb|CBI81360.1| Biopolymer transport exbB protein [Bartonella sp. 1-1C]
Length = 274
Score = 164 bits (416), Expect = 8e-39, Method: Composition-based stats.
Identities = 55/245 (22%), Positives = 102/245 (41%), Gaps = 24/245 (9%)
Query: 5 GLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFW 64
L + D S F++FM V+ +I L + S+LSW++ K V F + + R QL
Sbjct: 14 ALPMHDFSPFSMFMAADWVVQAVIIALLLASLLSWTIAFFKIVEFTVAKYKARRVFQLTN 73
Query: 65 SGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDK----------------------G 102
Q+ + S + + + E + S +
Sbjct: 74 DAQTFAELIASFQKIKGTSV-FFLEEVLKEIRLSSQQLCLMKSKDLHQNQGEVFPYDILS 132
Query: 103 ARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA 162
+ G+++R+ ++ ++ + I + L ++ S VG+ V G+M F IA
Sbjct: 133 CGNIDGVKERVHSLLSRSLFAAMRRIACGSAVLATIGSVAPFVGLFATVWGIMNAFIGIA 192
Query: 163 GYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+ + V PGI E+L++ +GL V+IP+ I YN FI + + A ++
Sbjct: 193 KSQTTRLDVVAPGIAEALLATAIGLFVAIPAVILYNGFIRFLNGYRNDLADIAAAIERLI 252
Query: 222 SRQTE 226
SR+ +
Sbjct: 253 SREFD 257
>gi|254180641|ref|ZP_04887239.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei 1655]
gi|184211180|gb|EDU08223.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei 1655]
Length = 235
Score = 164 bits (416), Expect = 9e-39, Method: Composition-based stats.
Identities = 46/213 (21%), Positives = 84/213 (39%), Gaps = 4/213 (1%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
I + +L SI SW ++ K+ + +RQ FW +L+
Sbjct: 7 ILHYLASGDAVTHAVAYVLLAMSIASWCFLLVKAWVLVRAKRQGPAALAAFWRAATLDDG 66
Query: 73 CKSLKNHHNIGLAAIFMSAMSEWKKSCD---KGARSPIGIQDRIDRMMDVAIARELEEIT 129
+L+ + A A E + + + +R+ R + A+ +
Sbjct: 67 IAALRAADKERVFAPLAEAAREADTASRVEPHALAARVERGERVLRALRHALRASQRRLE 126
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCV 188
L S+ S VG+LG V G+ SIA + ++ G + E+LI GL V
Sbjct: 127 FGQVLLASIGSTAPFVGLLGTVWGIYHALGSIAASGQAQIENVAGPVGEALIMTAFGLVV 186
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+IP+ +AYN ++ +++GFA + +
Sbjct: 187 AIPAVLAYNILGRLVRQLVEELDGFARDLHVFV 219
>gi|220921396|ref|YP_002496697.1| MotA/TolQ/ExbB proton channel [Methylobacterium nodulans ORS 2060]
gi|219946002|gb|ACL56394.1| MotA/TolQ/ExbB proton channel [Methylobacterium nodulans ORS 2060]
Length = 228
Score = 164 bits (415), Expect = 9e-39, Method: Composition-based stats.
Identities = 66/219 (30%), Positives = 104/219 (47%), Gaps = 10/219 (4%)
Query: 7 AIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG 66
A D+S LF+Q VK ++ LL + S+ W+VII+K++ + RRQ + F ++ +G
Sbjct: 9 AAHDMSFLGLFLQADPIVKGVMILLILASVACWTVIIEKTIRLASARRQAKVFARMVATG 68
Query: 67 QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
LE + A I +A W+ + ++RI+R M A+ +L+
Sbjct: 69 GGLEEGRGGIA-------ARIVAAAQEAWRD--QDPTETRAERRERIERAMRAALTLDLK 119
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLG 185
+ L L + SA VG+ G V G+M F SIA ++ V PGI E+L + +G
Sbjct: 120 RLQLGLPLLATSGSAAPFVGLFGTVWGIMNSFSSIAKSQDTSLAVVAPGIAEALFATAIG 179
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
L V+IP+ +AYNK D K L+R
Sbjct: 180 LVVAIPAVVAYNKLSGDLGKVQSAFAAAIGTLGNRLARD 218
>gi|225163848|ref|ZP_03726143.1| MotA/TolQ/ExbB proton channel [Opitutaceae bacterium TAV2]
gi|224801529|gb|EEG19830.1| MotA/TolQ/ExbB proton channel [Opitutaceae bacterium TAV2]
Length = 228
Score = 164 bits (415), Expect = 1e-38, Method: Composition-based stats.
Identities = 52/220 (23%), Positives = 110/220 (50%), Gaps = 5/220 (2%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLET 71
+IF +F L + I L + S+++W+V+ K +R FEQ ++
Sbjct: 9 NIFNVFSTTDLVGQIITVSLALSSLVTWTVMFGKYFELKRIRELNLAFEQRLRDERATLD 68
Query: 72 VCKSLKNHHNIGLAAIFMSAMSEWKKS----CDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ +H +I +F A+ ++++ ++GA S + + + AIAR++
Sbjct: 69 SATAYLHHRHIPYGDVFADAIDAYRRAGEIISERGADSVRTRLEHSENAIQRAIARQVLR 128
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVS-IPGIIESLISILLGL 186
+ FL ++ + +G+LG V G+M F ++AG + + + PG+ +L++ + GL
Sbjct: 129 YESSMIFLATVVTGAPFMGLLGTVWGVMEAFTAVAGQQTATIQTLAPGVSAALLTTVAGL 188
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
CV+IPS + YN + +K+ ++E F++ + + +T+
Sbjct: 189 CVAIPSLLGYNFLLGKTKQLTTEIENFSSSLADRIELETQ 228
>gi|21673465|ref|NP_661530.1| ExbB/TolQ family protein [Chlorobium tepidum TLS]
gi|21646569|gb|AAM71872.1| ExbB/TolQ family protein [Chlorobium tepidum TLS]
Length = 219
Score = 164 bits (415), Expect = 1e-38, Method: Composition-based stats.
Identities = 48/187 (25%), Positives = 93/187 (49%), Gaps = 3/187 (1%)
Query: 34 FSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMS 93
FSI+SW++I K + ++F F+ ++ + + + +N+ N LA +F +
Sbjct: 30 FSIISWAIIAWKFGFVRKSMNESQDFLDSFFDLRNADKLFAASENYRNSSLARVFRAGYI 89
Query: 94 EWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLG 153
E+ D+ S +++RI + + E + +T + FL ++ + +G+ G V G
Sbjct: 90 EYSGMRDRATAS--NVKERIMLAVKREVNAESKRLTHMVPFLATVGNTAPFIGLFGTVWG 147
Query: 154 MMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEG 212
+M FQ+I S ++ ++ PGI E+L++ GL +IP+ + YN + ME
Sbjct: 148 IMSSFQNIGLMKSASLAAVAPGISEALVATATGLVAAIPAVMGYNYLAHQIGQIERDMED 207
Query: 213 FANEFSA 219
FA +F
Sbjct: 208 FALDFVD 214
>gi|262199187|ref|YP_003270396.1| MotA/TolQ/ExbB proton channel [Haliangium ochraceum DSM 14365]
gi|262082534|gb|ACY18503.1| MotA/TolQ/ExbB proton channel [Haliangium ochraceum DSM 14365]
Length = 227
Score = 164 bits (415), Expect = 1e-38, Method: Composition-based stats.
Identities = 50/225 (22%), Positives = 107/225 (47%), Gaps = 10/225 (4%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREF---EQLFWS 65
MD+S+ ++ MGL VK + + SI + I++ + + Q F + + +
Sbjct: 1 MDMSLTEMWESMGLLVKLNTIFMLVMSIAMVYIAIERFIVYRKAATQNFSFVTALKDYLA 60
Query: 66 GQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARS------PIGIQDRIDRMMDV 119
+ L+ K+ H + +A + + ++K + + + D ++R ++
Sbjct: 61 KRRLDDARKAADRHKDSPVATVVGQGLEAYQKGREAQKEAGPDDVGDFDLVDSVNRALER 120
Query: 120 AIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESL 179
RE+ + + L+ L +++S VG+ G VLG++ F+ + G V PGI E+L
Sbjct: 121 VKEREVSSLRKGLNVLATVASIAPFVGLFGTVLGIINAFELLKGGG-GMEVIGPGIAEAL 179
Query: 180 ISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+S GL V+IP++I +N + + ++ + ++EF + R+
Sbjct: 180 VSTAFGLLVAIPAAILFNFYTGRVETMSVDINDVSSEFMDYVLRE 224
>gi|3913626|sp|P95375|EXBB_NEIMC RecName: Full=Biopolymer transport protein exbB
gi|1732297|gb|AAC44835.1| ExbB [Neisseria meningitidis]
Length = 220
Score = 164 bits (415), Expect = 1e-38, Method: Composition-based stats.
Identities = 34/220 (15%), Positives = 95/220 (43%), Gaps = 5/220 (2%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+++ +F + + L+ + SI++W +++ + + R+ ++ SL
Sbjct: 1 MNLKLVFESGDPVLIGVFVLMLLMSIVTWCLVVLRCIKLYRARKGNAAVKRHMRDNLSLN 60
Query: 71 TVCKSLKNHHNIGLAAIFMSA---MSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ ++ + L+ + A ++++ + + + + + ++A+ +
Sbjct: 61 EAVEKVRA-VDAPLSKLAQEALQFYRNYRRNEASELAQALPLNEYLVIQIRNSMAQIMRR 119
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGL 186
++ L S+ + +G+ G V G+ +I ++ ++ G I E+L++ GL
Sbjct: 120 FDYGMTALASIGATAPFIGLFGTVWGIYHALINIGQSGQMSIAAVAGPIGEALVATAAGL 179
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
V+IP+ +AYN +K ++ A++ L Q +
Sbjct: 180 FVAIPAVLAYNFLNRGTKILTQDLDAMAHDLHVRLLNQKD 219
>gi|325140812|gb|EGC63322.1| biopolymer transport protein ExbB [Neisseria meningitidis CU385]
Length = 220
Score = 164 bits (415), Expect = 1e-38, Method: Composition-based stats.
Identities = 34/219 (15%), Positives = 95/219 (43%), Gaps = 3/219 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+++ +F + + L+ + SI++W +++ + + R+ ++ SL
Sbjct: 1 MNLKLVFESGDPVLIGVFVLMLLMSIVTWCLVVLRCIKLYRARKGNAAVKRHMRDTLSLN 60
Query: 71 TVCKSLK--NHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ ++ + LA + + ++++ + + + + + ++A+ +
Sbjct: 61 DAVEKVRAVDAPLSKLAQEALQSYRNYRRNEASELAQALPLNEYLVIQIRNSMAQIMRRF 120
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLC 187
++ L S+ + +G+ G V G+ +I ++ ++ G I E+L++ GL
Sbjct: 121 DYGMTALASIGATAPFIGLFGTVWGIYHALINIGQSGQMSIAAVAGPIGEALVATAAGLF 180
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
V+IP+ +AYN +K ++ A++ L Q +
Sbjct: 181 VAIPAVLAYNFLNRGTKILPQDLDAMAHDLHVRLLNQKD 219
>gi|149923452|ref|ZP_01911856.1| MotA/TolQ/ExbB proton channel [Plesiocystis pacifica SIR-1]
gi|149815704|gb|EDM75231.1| MotA/TolQ/ExbB proton channel [Plesiocystis pacifica SIR-1]
Length = 231
Score = 163 bits (414), Expect = 1e-38, Method: Composition-based stats.
Identities = 53/209 (25%), Positives = 93/209 (44%), Gaps = 7/209 (3%)
Query: 23 AVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNI 82
V ++ +L L VI+ K + + Q F FW + L+ + + +
Sbjct: 21 IVLAVVIVLLALVALCIFVILYKLIQVSQAQSQSVTFLDRFWESKRLDDIYRVAEGLKAS 80
Query: 83 GLAAIFMSAMSEWKKSCDKGARSPIGIQDR------IDRMMDVAIARELEEITEKLSFLG 136
LAA+F + E K + A + DR I+R + A EL ++ L FL
Sbjct: 81 PLAAMFRAGYVELSKIKKRSAEGGESMHDRMEDTANIERALQRARVSELTKLETLLPFLA 140
Query: 137 SMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISILLGLCVSIPSSIA 195
+ +A +G+ G V G+M F +IA + I I E+L++ L L ++P+ +A
Sbjct: 141 TTGAAAPFIGLFGTVWGIMDAFLAIAAAGEAELSEISQPIAEALVTTALALLSAVPAVVA 200
Query: 196 YNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+N F K + +M+ F N++ I+ R
Sbjct: 201 FNYFNRRLKVLSAEMQTFGNDYLNIIRRH 229
>gi|332704877|ref|ZP_08424965.1| MotA/TolQ/ExbB proton channel [Desulfovibrio africanus str. Walvis
Bay]
gi|332555026|gb|EGJ52070.1| MotA/TolQ/ExbB proton channel [Desulfovibrio africanus str. Walvis
Bay]
Length = 229
Score = 163 bits (414), Expect = 1e-38, Method: Composition-based stats.
Identities = 59/220 (26%), Positives = 105/220 (47%), Gaps = 4/220 (1%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
MD + + L ++ +L + S+ SW VII K + ++ ++ F +
Sbjct: 1 MDGFLGGILGGASLVGLTVLFVLVLMSLGSWYVIIFKLMTLNRAKKAILAEQRAFQDARD 60
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIG---IQDRIDRMMDVAIAREL 125
+ + +L + L I +A+ E K+ + +D + R + A+A E+
Sbjct: 61 MASAMHALGKDSSSSLYRIAHNAVRELKRIEASKTEVKVKARLAKDNMRRALRQAVASEM 120
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILL 184
+ ++SFLG+ ++A +G+LG V G++ FQSIA S + PG+ E+LI+
Sbjct: 121 SAMDSQMSFLGTCANATPYIGLLGTVWGIIVAFQSIATLKSAAISAVAPGMAEALIATAF 180
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
GL V+IPS+IAYN K ++ FA F + R+
Sbjct: 181 GLAVAIPSTIAYNAIQGLLSKIETELVNFAGIFLNRIQRE 220
>gi|50123219|ref|YP_052386.1| putative biopolymer transport protein [Pectobacterium atrosepticum
SCRI1043]
gi|49613745|emb|CAG77196.1| putative biopolymer transport protein [Pectobacterium atrosepticum
SCRI1043]
Length = 240
Score = 163 bits (414), Expect = 1e-38, Method: Composition-based stats.
Identities = 54/216 (25%), Positives = 106/216 (49%), Gaps = 7/216 (3%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
+M + LF G +I LL +FS+++W + + K V + +R+ R F FW
Sbjct: 2 VMTLGHIELFSAEG----AVILLLLLFSLVTWGLGLLKLVQYGRAQRRDRHFRAAFWQQD 57
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ ++ LA + ++A+ ++ + A + I + DR++R + I RE
Sbjct: 58 DVSQTPETSAKQPGS-LANLALAAVKAPERISGQLALN-IHLPDRVERALQQQIQRERRS 115
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGL 186
+ L+ L S+ S +G+ G V G+M Q I S ++ ++ G I +LI+ +G+
Sbjct: 116 LEGGLAVLASIGSTSPFIGLFGTVWGIMAALQEIGLSGSASLDTVAGPIGNALIATGVGI 175
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
V++P+ + YN F+ K M+ FA++ +++
Sbjct: 176 AVAVPAVLIYNYFLRRLKLAVADMDDFAHDVYSVMQ 211
>gi|307823253|ref|ZP_07653483.1| MotA/TolQ/ExbB proton channel [Methylobacter tundripaludum SV96]
gi|307736028|gb|EFO06875.1| MotA/TolQ/ExbB proton channel [Methylobacter tundripaludum SV96]
Length = 221
Score = 163 bits (413), Expect = 2e-38, Method: Composition-based stats.
Identities = 49/201 (24%), Positives = 93/201 (46%), Gaps = 4/201 (1%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVC---KSLKNHHNI 82
+ L FS+++W++I+ K F R F ++FW +LE +
Sbjct: 13 GTLYTLLAFSVVTWTLILFKIWQFTKNSFYNRAFNKVFWDAANLEQAKTLPAEIARGPQA 72
Query: 83 GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAG 142
+A + MSE ++S + + + ++ + V + +E + L+ L S+ S
Sbjct: 73 RIAQQGFAWMSESQQSEGQSLKYRGVPSELLEHSLLVQMQQEQHAMESGLTMLASIGSTS 132
Query: 143 LLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIPSSIAYNKFIE 201
VG+ G VLG+M I S ++ + G I ++L++ +G+ V++P+ +AYN F+
Sbjct: 133 PFVGLFGTVLGIMHAMHEITASGSTSLDVVAGPIGDALVATAIGIAVAVPAVLAYNFFLR 192
Query: 202 DSKKFAMQMEGFANEFSAILS 222
K+ +E F F I S
Sbjct: 193 RVKQQRAGLENFVVSFMHIAS 213
>gi|206603060|gb|EDZ39540.1| TolQ [Leptospirillum sp. Group II '5-way CG']
Length = 236
Score = 163 bits (413), Expect = 2e-38, Method: Composition-based stats.
Identities = 46/229 (20%), Positives = 95/229 (41%), Gaps = 18/229 (7%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
++I L Q+ + ++ +L I S SW +I+ K + F + R+ + F +F
Sbjct: 1 MNISDLLFQISPLAETVLFILLILSATSWGIIVLKLITFFRVDRENKAFLSIFEKNDLFS 60
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGI-----------------QDRI 113
+ + + LA +F + + KK + S + +
Sbjct: 61 IIYEKSLDFQESPLAQMFKAVYEKIKKMPESKDPSNENSHYAELEIIQKALNKSRKMEIV 120
Query: 114 DRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI- 172
+ + +++ KL L + + +G+ G V G++ F I+ S ++ ++
Sbjct: 121 QNTLVQSQNLATSQMSVKLPILATTAGVSPFIGLFGTVWGIVHSFMGISHQSSASIAAVA 180
Query: 173 PGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
PGI E+LI+ +GL +IP+ + YN F++ + F+ E L
Sbjct: 181 PGIAEALITTAVGLFTAIPAVVGYNYFVQKIRSMNSLSNHFSMEIRNYL 229
>gi|261399992|ref|ZP_05986117.1| biopolymer transport protein ExbB [Neisseria lactamica ATCC 23970]
gi|313667886|ref|YP_004048170.1| biopolymer transport protein [Neisseria lactamica ST-640]
gi|269210457|gb|EEZ76912.1| biopolymer transport protein ExbB [Neisseria lactamica ATCC 23970]
gi|313005348|emb|CBN86781.1| biopolymer transport protein [Neisseria lactamica 020-06]
Length = 220
Score = 163 bits (413), Expect = 2e-38, Method: Composition-based stats.
Identities = 36/220 (16%), Positives = 95/220 (43%), Gaps = 5/220 (2%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+++ +F + + L+ + SI++W +I+ + + R+ ++ L
Sbjct: 1 MNLKLVFESGDPVLIGVFVLMLLMSIVTWCLIVLRCIKLYQARKGNAAVKRHMSDTLPLG 60
Query: 71 TVCKSLKNHHNIGLAAIFMSA---MSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ ++ + L+ + A +++S + + + + + ++A+ +
Sbjct: 61 DAVEKVRA-VDAPLSKLVQEALQSYRNYRRSEASELAQALPLNEYLVIQIRNSMAQIMRR 119
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGL 186
++ L S+ + +G+ G V G+ +I ++ ++ G I E+L++ GL
Sbjct: 120 FDYGMTALASIGATAPFIGLFGTVWGIYHALINIGQSGQMSIAAVAGPIGEALVATAAGL 179
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
V+IP+ +AYN +K A ++ A++ L Q +
Sbjct: 180 FVAIPAVLAYNFLNRGTKTLAQDLDAMAHDLHVRLLNQKD 219
>gi|161870576|ref|YP_001599748.1| biopolymer transport protein [Neisseria meningitidis 053442]
gi|304386787|ref|ZP_07369054.1| biopolymer transporter ExbB [Neisseria meningitidis ATCC 13091]
gi|161596129|gb|ABX73789.1| biopolymer transport protein [Neisseria meningitidis 053442]
gi|304339137|gb|EFM05224.1| biopolymer transporter ExbB [Neisseria meningitidis ATCC 13091]
Length = 230
Score = 163 bits (413), Expect = 2e-38, Method: Composition-based stats.
Identities = 34/219 (15%), Positives = 95/219 (43%), Gaps = 3/219 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+++ +F + + L+ + SI++W +++ + + R+ ++ SL
Sbjct: 11 MNLKLVFESGDPVLIGVFVLMLLMSIVTWCLVVLRCIKLYRARKGNAAVKRHMRDTLSLN 70
Query: 71 TVCKSLK--NHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ ++ + LA + + ++++ + + + + + ++A+ +
Sbjct: 71 DAVEKVRAVDAPLSKLAQEALQSYRNYRRNEASELAQALPLNEYLVIQIRNSMAQIMRRF 130
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLC 187
++ L S+ + +G+ G V G+ +I ++ ++ G I E+L++ GL
Sbjct: 131 DYGMTALASIGATAPFIGLFGTVWGIYHALINIGQSGQMSIAAVAGPIGEALVATAAGLF 190
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
V+IP+ +AYN +K ++ A++ L Q +
Sbjct: 191 VAIPAVLAYNFLNRGTKILTQDLDAMAHDLHVRLLNQKD 229
>gi|226227416|ref|YP_002761522.1| putative biopolymer transport protein [Gemmatimonas aurantiaca
T-27]
gi|226090607|dbj|BAH39052.1| putative biopolymer transport protein [Gemmatimonas aurantiaca
T-27]
Length = 241
Score = 163 bits (413), Expect = 2e-38, Method: Composition-based stats.
Identities = 45/222 (20%), Positives = 93/222 (41%), Gaps = 5/222 (2%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE---QLFWSGQ 67
+ I L+ +MG K I+ L I S S ++IQK + + R+F F
Sbjct: 1 MDIMDLWHEMGWFAKGIVWTLLIMSAYSTGIMIQKWWQMRRAQGETRKFAPEFSQFLEED 60
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+L + + +A + A+ E + G+ + I +R ++ + + +
Sbjct: 61 NLTEAINLAEGYKKSHVARVLGGALGEIRPLIQDGSVTVADIN-SAERAVEREMLMTVVD 119
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV-SIPGIIESLISILLGL 186
+ L L ++ + VG++G +G++ F +++ + + GI E+LI+ +G+
Sbjct: 120 LKRGLGVLATVGATAPFVGLVGTTMGIVNSFTAMSTSGAGGISSMAAGIAEALITTAIGI 179
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
V+IP+ +N F +M + E L + G
Sbjct: 180 GVAIPAVWGFNYFQTKIDNLTAEMTYTSKEMIDYLIKGVSGE 221
>gi|83944057|ref|ZP_00956514.1| biopolymer transport protein ExbB [Sulfitobacter sp. EE-36]
gi|83845304|gb|EAP83184.1| biopolymer transport protein ExbB [Sulfitobacter sp. EE-36]
Length = 287
Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats.
Identities = 51/216 (23%), Positives = 92/216 (42%), Gaps = 7/216 (3%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLET 71
S A+FM + VK ++ L I S+L W+V K + + R + +++
Sbjct: 56 SPLAMFMGADIVVKAVMFGLAIASVLGWAVWAGKILQVSWANARLRRSYRKLAKAGAVKG 115
Query: 72 VCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEK 131
+ + A+ +A++E S + GI++R+ + A +
Sbjct: 116 AQAK---SFSGPMRAMIRAALAEIDIS---DGLNKAGIKERVASELSRIEAGAARSMQSG 169
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSI 190
LGS+ S +G+ G V G+M F IA S ++ V PGI E+L++ +GL +I
Sbjct: 170 AMILGSIGSTAPFIGLFGTVWGIMNSFIGIAESGSTSLTVVAPGIAEALLATAIGLVAAI 229
Query: 191 PSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
P+ + YN + ++ A LSR +
Sbjct: 230 PAVLLYNHITRVVTGYRARVGDAAALVERCLSRDLD 265
>gi|34497427|ref|NP_901642.1| biopolymer transport protein [Chromobacterium violaceum ATCC 12472]
gi|34497439|ref|NP_901654.1| biopolymer transport protein [Chromobacterium violaceum ATCC 12472]
gi|34103282|gb|AAQ59644.1| biopolymer transport protein [Chromobacterium violaceum ATCC 12472]
gi|34103294|gb|AAQ59656.1| biopolymer transport protein [Chromobacterium violaceum ATCC 12472]
Length = 248
Score = 163 bits (412), Expect = 3e-38, Method: Composition-based stats.
Identities = 46/221 (20%), Positives = 83/221 (37%), Gaps = 13/221 (5%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YG+ AL+ Q K + +L I S +W V I K + L +Q E
Sbjct: 34 NPYGID-------ALWSQGDFVAKGTLIILLIMSASTWYVGIVKLLEQRRLIKQGHELLA 86
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
G L+ L + G+ + A E + + + + + A+
Sbjct: 87 H--HGVDLQKAASELADE---GMYSAVAQAGIEAAAEHKGELANRVDLNTWVAMAISDAV 141
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLI 180
+ LS + ++ S VG+ G V G+ I ++ + G + E+LI
Sbjct: 142 DSASHHMQNGLSVIATVGSTAPFVGLFGTVWGIYHALVKIGTSGQASIDKVAGPVGEALI 201
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+GL V++P+ + YN + +K + + A L
Sbjct: 202 MTAIGLAVAVPAVLGYNWLVRRNKLVLDNVRVVSGRLHASL 242
>gi|254994809|ref|ZP_05276999.1| TOLQ protein (tolQ) [Anaplasma marginale str. Mississippi]
gi|255002937|ref|ZP_05277901.1| TOLQ protein (tolQ) [Anaplasma marginale str. Puerto Rico]
gi|255004062|ref|ZP_05278863.1| TOLQ protein (tolQ) [Anaplasma marginale str. Virginia]
Length = 221
Score = 163 bits (412), Expect = 3e-38, Method: Composition-based stats.
Identities = 53/211 (25%), Positives = 106/211 (50%), Gaps = 10/211 (4%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+S+ F + VK + +L FS++SWSVI++K + R+ RE E+ F S ++
Sbjct: 15 LSMLGAFSNADIVVKATMLILVAFSVISWSVILKKHLVLRKRAREIRELEERFSSRRTFT 74
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
+ + + + I ++ I M + ++ Q + R + ++R L+++ +
Sbjct: 75 NLTEIIGHSTGI-VSQILNYGM--------QNSKLVTNKQAGLHRFVSAELSRTLDKLED 125
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCVS 189
+ L ++ S+ +G+ G V G++G +SI S + S+ PG+ E+L + LGL V+
Sbjct: 126 NVELLATIGSSSPFIGLFGTVWGVVGSLRSIPAGASVGIASVGPGMAEALFATALGLLVA 185
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFANEFSAI 220
IP++I YN+F + + ++ E A
Sbjct: 186 IPANIFYNRFTALITRMSNRLSNLVCELEAF 216
>gi|254489089|ref|ZP_05102293.1| tonB-system energizer ExbB [Roseobacter sp. GAI101]
gi|214042097|gb|EEB82736.1| tonB-system energizer ExbB [Roseobacter sp. GAI101]
Length = 283
Score = 163 bits (412), Expect = 3e-38, Method: Composition-based stats.
Identities = 52/216 (24%), Positives = 93/216 (43%), Gaps = 7/216 (3%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLET 71
S A+FM + VK ++ L I S+L W+V K + + R + +LE
Sbjct: 56 SPLAMFMGADIVVKAVMFGLAIASVLGWTVWAGKLLQVKWANGRLRRSYKRLAKQGALEG 115
Query: 72 VCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEK 131
++ + + + +A +E +S G + GI++R+ + +
Sbjct: 116 TDAAI---YAGPVRVMVQAAQAEVARS---GGMNKAGIKERVASELSRIETGAARSMQSG 169
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSI 190
LGS+ S +G+ G V G+M F IA S ++ V PGI E+L++ +GL +I
Sbjct: 170 AMVLGSIGSTAPFIGLFGTVWGIMNSFIGIAESGSTSLSVVAPGIAEALLATAIGLVAAI 229
Query: 191 PSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
P+ + YN + ++ A LSR +
Sbjct: 230 PAVLLYNHVTRIVSGYRARIGDVAALVERCLSRDLD 265
>gi|207744080|ref|YP_002260472.1| tolq-related transport (c-terminal fragment) transmembrane protein
[Ralstonia solanacearum IPO1609]
gi|206595484|emb|CAQ62411.1| probable tolq-related transport (c-terminal fragment) transmembrane
protein [Ralstonia solanacearum IPO1609]
Length = 170
Score = 163 bits (412), Expect = 3e-38, Method: Composition-based stats.
Identities = 52/155 (33%), Positives = 81/155 (52%), Gaps = 3/155 (1%)
Query: 75 SLKNHHNIGLAAIFMSAMSEWKKSCDK--GARSPIGIQDRIDRMMDVAIARELEEITEKL 132
+ +HH L IF + M E+ K+ ++ G P I D R M A RE++ + L
Sbjct: 16 KVPSHHTGALERIFEAGMREFLKTREQQRGIGDPSAILDASRRAMRAAYQREMDSLESHL 75
Query: 133 SFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIP 191
FL S+ S +G+ G V G+M F+ ++ + PGI E+L++ +GL +IP
Sbjct: 76 PFLASVGSVSPYIGLFGTVWGIMNAFRGLSNVQQATLSAVAPGIAEALVATAIGLFAAIP 135
Query: 192 SSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+ IAYN++ + + A + E F EFS IL RQT
Sbjct: 136 AVIAYNRYATEMDRLANRFESFMEEFSNILQRQTR 170
>gi|239813428|ref|YP_002942338.1| MotA/TolQ/ExbB proton channel [Variovorax paradoxus S110]
gi|239800005|gb|ACS17072.1| MotA/TolQ/ExbB proton channel [Variovorax paradoxus S110]
Length = 235
Score = 162 bits (411), Expect = 3e-38, Method: Composition-based stats.
Identities = 52/214 (24%), Positives = 88/214 (41%), Gaps = 7/214 (3%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+S+ L Q + + LL SI SW VI+ K+ R FW +L
Sbjct: 1 MSVLELLTQGDGVSRSVAALLLAMSIASWVVILWKAWLLRGGTRDVLRSIAAFWQSATLA 60
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKG---ARSPIGIQDRIDRMMDVAIARELEE 127
+ L+ L +SA+ + + R+ R + A+ L
Sbjct: 61 DAQQRLQAFDRAMLVGPAVSAIRNAAATDAGDATLGATTGDRNQRLTRALRGALHGALRR 120
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYY---SNNVVSIPGIIESLISILL 184
+ L ++ + VG+LG V G+ G IAG + + V+ P + E+L+
Sbjct: 121 LQSGQILLATVGATAPFVGLLGTVWGIYGALSGIAGQTGGFTIDKVAGP-VGEALVMTAF 179
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFS 218
GL V+IP+ +AYN F + ++EGFA++
Sbjct: 180 GLAVAIPAVLAYNVFGRVIGRIEAELEGFAHDLL 213
>gi|329114782|ref|ZP_08243539.1| Biopolymer transport protein ExbB [Acetobacter pomorum DM001]
gi|326695913|gb|EGE47597.1| Biopolymer transport protein ExbB [Acetobacter pomorum DM001]
Length = 300
Score = 162 bits (411), Expect = 3e-38, Method: Composition-based stats.
Identities = 41/205 (20%), Positives = 86/205 (41%), Gaps = 11/205 (5%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YGL AL+ + + ++ ++ I S+ +W ++I K + L +E +
Sbjct: 100 NPYGLG-------ALWSNGDIIARGVLLIMLIMSLGTWYIMITKFIEQARLFAAAKEATK 152
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
FW+ S++ +L + A +E + + I + + A+
Sbjct: 153 SFWTKHSIQEGASALTSTSPFRYIADTGIVAAEH---HEGTMQESIDLHSWTGMSIQRAV 209
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLI 180
+ + L+FLG++ S +G+ G V G+ +I ++ + G + ESLI
Sbjct: 210 NNIQNSLQKGLAFLGTVGSTSPFIGLFGTVWGIYHALTAIGIAGQASIDKVAGPVGESLI 269
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKK 205
+GL ++P+ + YN + +
Sbjct: 270 MTAIGLATAVPAVLGYNLLVRRQQD 294
>gi|218780982|ref|YP_002432300.1| MotA/TolQ/ExbB proton channel [Desulfatibacillum alkenivorans
AK-01]
gi|218762366|gb|ACL04832.1| MotA/TolQ/ExbB proton channel [Desulfatibacillum alkenivorans
AK-01]
Length = 240
Score = 162 bits (411), Expect = 3e-38, Method: Composition-based stats.
Identities = 50/208 (24%), Positives = 90/208 (43%), Gaps = 6/208 (2%)
Query: 24 VKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIG 83
V+ ++ +L FS W++I K + + +F + FW ++ K N
Sbjct: 2 VQFVLFVLLSFSAACWTIIGLKIRQLWLAKNETAQFVEFFWKSGNMAKSYAKAKQLTNSP 61
Query: 84 LAAIFMSAMSEWKKSCDKGARSP-----IGIQDRIDRMMDVAIARELEEITEKLSFLGSM 138
+A + A E + D I R + A EL +T+ + FL ++
Sbjct: 62 VARAYRVAYMEMVRINQSSGNGQNQEGFSMGTDNIKRALRRANVSELTRLTQWVPFLATI 121
Query: 139 SSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYN 197
+ +G+ G V G+M F I + + V PGI E+L++ GL +IP+ +AYN
Sbjct: 122 GNTAPFIGLFGTVWGIMSAFHGIGQRGTATLAVVAPGISEALVATAAGLAAAIPAVMAYN 181
Query: 198 KFIEDSKKFAMQMEGFANEFSAILSRQT 225
F + Q+ FA++F ++ R+
Sbjct: 182 HFTSRIRVAESQLNNFASDFINVVEREV 209
>gi|319409303|emb|CBI82947.1| Biopolymer transport exbB protein [Bartonella schoenbuchensis R1]
Length = 246
Score = 162 bits (411), Expect = 3e-38, Method: Composition-based stats.
Identities = 49/236 (20%), Positives = 93/236 (39%), Gaps = 25/236 (10%)
Query: 16 LFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKS 75
+FM V+ +I +L + S++SW++ + K V +R+ Q + Q+ +
Sbjct: 1 MFMAADGVVQAVIVVLMLASLISWTIALAKIVEITWAKRKAHRALQFVLNAQTFTHLTSD 60
Query: 76 LKNHHNI-----GLAAIFMS-------------------AMSEWKKSCDKGARSPIGIQD 111
KN G AIF+ E K G+++
Sbjct: 61 FKNQQEANSVFLGAGAIFLEETLKEVNLSTQQVVFIKFQGTRERKDDDSALCAFNEGVKE 120
Query: 112 RIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-V 170
R+ ++ + + + L ++ + VG+ V G+M F IA + + V
Sbjct: 121 RVHLLLARCVLTATRHMACGTAVLATIGAIAPFVGLFATVWGIMNAFIGIAQTQTTRLDV 180
Query: 171 SIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
PGI E+L++ +GL V+IP+ + YN + + A +LSR+ +
Sbjct: 181 VAPGIAEALLATAIGLFVAIPAVVMYNGLTRALNGYRNDLGDIAAAIERLLSRELD 236
>gi|296314376|ref|ZP_06864317.1| biopolymer transport protein ExbB [Neisseria polysaccharea ATCC
43768]
gi|296838933|gb|EFH22871.1| biopolymer transport protein ExbB [Neisseria polysaccharea ATCC
43768]
Length = 220
Score = 162 bits (410), Expect = 4e-38, Method: Composition-based stats.
Identities = 38/222 (17%), Positives = 97/222 (43%), Gaps = 7/222 (3%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
MD+ + +F + + + L+ + SI++W +I+ + + R+ ++
Sbjct: 1 MDLKL--VFESGDVVLIGVFVLMLLMSIVTWCLIVLRCIKLYQARKGNAAVKRHMSDTLP 58
Query: 69 LETVCKSLKNHHNIGLAAIFMSA---MSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
L + ++ + L+ + A +++S + + + + + ++A+ +
Sbjct: 59 LGDAVEKVRA-VDAPLSKLVQEALQSYRNYRRSEASELAQALPLNEYLVIQIRNSMAQIM 117
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILL 184
++ L S+ + +G+ G V G+ +I ++ ++ G I E+L++
Sbjct: 118 RRFDYGMTALASIGATAPFIGLFGTVWGIYHALINIGQSGQMSIAAVAGPIGEALVATAA 177
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
GL V+IP+ +AYN +K A ++ A++ L Q +
Sbjct: 178 GLFVAIPAVLAYNFLNRGTKTLAQDLDAMAHDLHVRLLNQKD 219
>gi|171059908|ref|YP_001792257.1| MotA/TolQ/ExbB proton channel [Leptothrix cholodnii SP-6]
gi|170777353|gb|ACB35492.1| MotA/TolQ/ExbB proton channel [Leptothrix cholodnii SP-6]
Length = 278
Score = 162 bits (410), Expect = 4e-38, Method: Composition-based stats.
Identities = 47/223 (21%), Positives = 96/223 (43%), Gaps = 14/223 (6%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YGL A+ + K ++ LL I S+ +W +++ K++ L R+ +
Sbjct: 60 NPYGLK-------AMIEHGDMVAKGVLGLLMIMSLGTWYLLVTKALEQRKLLREAKSVGA 112
Query: 62 --LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDV 119
FW+ +L SL + I +A+ +K G + + + I ++
Sbjct: 113 GSRFWTAGTLRQGSDSLA--KDGAFRFIADTALEASQK--HDGVLAGVDLGSWITTSLEE 168
Query: 120 AIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIES 178
A + + L+FL ++ S +G+ G V G++ +I ++ + G + E+
Sbjct: 169 AGEEVEHRLQKGLAFLATVGSTSPFIGLFGTVWGILNALTAIGVAGQASIDKVAGPVGEA 228
Query: 179 LISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
LI +GL V++P+ + YN + + + F ++ A L
Sbjct: 229 LIMTAIGLAVAVPAVLGYNWLVGRNSTALHYVTTFGSKLRATL 271
>gi|307822092|ref|ZP_07652324.1| MotA/TolQ/ExbB proton channel [Methylobacter tundripaludum SV96]
gi|307736658|gb|EFO07503.1| MotA/TolQ/ExbB proton channel [Methylobacter tundripaludum SV96]
Length = 262
Score = 162 bits (410), Expect = 4e-38, Method: Composition-based stats.
Identities = 51/230 (22%), Positives = 90/230 (39%), Gaps = 24/230 (10%)
Query: 17 FMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG---------- 66
Q G + +L SI SW++++ K++ LR F + FW
Sbjct: 13 ISQGGAVSIAVAAMLLAMSIGSWTLMVIKAIQARRLRSNSARFLERFWQASSTTLSSMVT 72
Query: 67 ---QSLETVCK----------SLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRI 113
+ L + NHH A +F + + + I
Sbjct: 73 VMSEDLNKAENPFARLAIQGINAANHHKRYTAQLFAEHAVTANEGGSSALQEHSRHDEFI 132
Query: 114 DRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP 173
+ + I +E + L+ L S+ S +G+ G V G+ +IA +V +
Sbjct: 133 AQALRRVIGQEAMHLETGLTLLASVGSIAPFIGLFGTVWGIYHALGAIAVGGQASVDKVA 192
Query: 174 G-IIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
G + E+LI GL V+IP+ +AYN + D++ Q+E FA++ L+
Sbjct: 193 GPVGEALIMTAFGLAVAIPAVLAYNALVRDNRLLMGQLETFAHDLHTYLT 242
>gi|302878962|ref|YP_003847526.1| MotA/TolQ/ExbB proton channel [Gallionella capsiferriformans ES-2]
gi|302581751|gb|ADL55762.1| MotA/TolQ/ExbB proton channel [Gallionella capsiferriformans ES-2]
Length = 218
Score = 162 bits (410), Expect = 4e-38, Method: Composition-based stats.
Identities = 43/189 (22%), Positives = 87/189 (46%), Gaps = 4/189 (2%)
Query: 35 SILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSE 94
S+ +WS+ + K R+ R F FW+ + + + + +A + + SE
Sbjct: 23 SVATWSIALFKLWKQTKDRKHNRTFHGAFWAASNWS-AAEGVASEGEGDVALLAKAGFSE 81
Query: 95 WKK--SCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVL 152
+ S + Q+ ++R + + L+ L ++ S VG+ G V
Sbjct: 82 LRALGSDRQDLMHTGAPQEILERQLRQQVENIKRYHERGLAELATIGSTAPFVGLFGTVW 141
Query: 153 GMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
G+M QSI + ++ + G I E+LI+ +G+ ++P+ +AYN F+ + K ++E
Sbjct: 142 GIMHALQSIGQSGAASLDVVAGPIGEALIATAIGIATALPAVLAYNYFLRNLKVRITELE 201
Query: 212 GFANEFSAI 220
FA++F +
Sbjct: 202 NFAHDFMRL 210
>gi|103486299|ref|YP_615860.1| MotA/TolQ/ExbB proton channel [Sphingopyxis alaskensis RB2256]
gi|98976376|gb|ABF52527.1| MotA/TolQ/ExbB proton channel [Sphingopyxis alaskensis RB2256]
Length = 273
Score = 162 bits (410), Expect = 4e-38, Method: Composition-based stats.
Identities = 39/218 (17%), Positives = 88/218 (40%), Gaps = 12/218 (5%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YGL + G+ + +L I + + ++ K + Q + +
Sbjct: 36 NPYGLVPA-------LCEGGIVSQLTFLILLIMFVGTLYILFTKLFEQNKVISQGKTVDA 88
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
FW +L L+ N + + ++ P+ D + ++ +
Sbjct: 89 NFWRAPTLADGAAKLE--KNSAYRQVVEDGLRANEEHNK--LTDPVEAHDWMHGTLERSQ 144
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLI 180
++ L+FL ++ S +G+ G V+G++ I ++ ++ G + E+LI
Sbjct: 145 NHINSKLNSGLAFLATVGSTAPFIGLFGTVIGILRALVKIGASGQASIDTVAGPVGEALI 204
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFS 218
+GL V++P+ +A+N +K A ++ F+N+
Sbjct: 205 MTAIGLIVAVPAVLAFNWLQSRNKMIARRLSIFSNDVL 242
>gi|221069917|ref|ZP_03546022.1| MotA/TolQ/ExbB proton channel [Comamonas testosteroni KF-1]
gi|220714940|gb|EED70308.1| MotA/TolQ/ExbB proton channel [Comamonas testosteroni KF-1]
Length = 219
Score = 162 bits (410), Expect = 4e-38, Method: Composition-based stats.
Identities = 45/218 (20%), Positives = 87/218 (39%), Gaps = 1/218 (0%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
M ++ + L+ + S+LSW VI+ K RR + +FW
Sbjct: 1 MSAGMWQWLAEGDAVTWATAALMLLMSVLSWVVILYKLWFMAAARRSVPQAVAVFWQMPD 60
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
L ++ GL A+ + + R+ R + A+ + ++
Sbjct: 61 LTQALAQVRARDRQGLVQPMAVAVEQGSGADQGSLEQRAAPDQRLMRRLREALGQASTQL 120
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLC 187
+ L ++ + VG+LG V G+ ++AG + + G + E+L+ GL
Sbjct: 121 QWGQTLLATIGATAPFVGLLGTVWGIHHALGTLAGSGQVEIAQLAGPVGEALVMTAAGLA 180
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
V++P+ +AYN + + +EGFA++ A Q
Sbjct: 181 VALPAVLAYNLLGRSASQLEAVLEGFAHDLHAQFGAQA 218
>gi|194337190|ref|YP_002018984.1| protein TolQ [Pelodictyon phaeoclathratiforme BU-1]
gi|194309667|gb|ACF44367.1| protein TolQ [Pelodictyon phaeoclathratiforme BU-1]
Length = 219
Score = 161 bits (409), Expect = 5e-38, Method: Composition-based stats.
Identities = 57/210 (27%), Positives = 103/210 (49%), Gaps = 3/210 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+ IF LF G V ++++L FS++SW++I K R+ R F F++ +++
Sbjct: 6 LGIFGLFSDAGPVVLMVLSILLAFSVISWAIIAFKFGYLRKSLRESRLFLDYFFAVSNVD 65
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
V +N L +F + E++ DK + RI R M + E + ++
Sbjct: 66 KVFTECENFRTGSLPRVFRACYIEYRSLGDKSDLRQG--RARIARAMKREVNAENKRLST 123
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCVS 189
+ FL ++ + +G+ G V G+M FQ+I S ++ ++ PGI E+LI+ GL +
Sbjct: 124 LVPFLATVGNTAPFIGLFGTVWGIMNSFQNIGMTQSASLAAVAPGISEALIATAAGLAAA 183
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
IP+ + YN F + +E F+ EF +
Sbjct: 184 IPAVMGYNFFAQQIGMIERDLEEFSPEFVS 213
>gi|281357073|ref|ZP_06243563.1| MotA/TolQ/ExbB proton channel [Victivallis vadensis ATCC BAA-548]
gi|281316631|gb|EFB00655.1| MotA/TolQ/ExbB proton channel [Victivallis vadensis ATCC BAA-548]
Length = 353
Score = 161 bits (409), Expect = 5e-38, Method: Composition-based stats.
Identities = 47/223 (21%), Positives = 98/223 (43%), Gaps = 19/223 (8%)
Query: 17 FMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ---SLETVC 73
+ K I+ LL I S+ +WSV+I K + R+ F F + + + +
Sbjct: 18 YTNSDGVGKGIVVLLLIGSVFTWSVMIDKGMALYRARQCSNRFLARFRANKKNIATPQLV 77
Query: 74 KSLKNHHNIGLAAIFMSAMS---EWKKSCDKGARSPIGIQDR-----------IDRMMDV 119
+ + + AI+ + + E+ +S + + I R I+ +++
Sbjct: 78 RE-GSADPGPIGAIYSAGVERLLEFYESDSRSQQYSTAISTRPSRLSDAQYNAIEAVLER 136
Query: 120 AIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-VVSIPGIIES 178
++ +++++ ++ FL ++ S G+ G V G+M F IA ++ PG+ +
Sbjct: 137 EVSSQIQQLETRIGFLATLVSVSPFCGLFGTVWGVMLAFCGIAAAGKSDFTALAPGVAGA 196
Query: 179 LISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
L++ + GL V+IPS + YN + + M+ F EF +
Sbjct: 197 LLTTVAGLIVAIPSLVGYNLLTATIRTLTITMDNFTEEFMVRI 239
>gi|194099155|ref|YP_002002240.1| ExbB [Neisseria gonorrhoeae NCCP11945]
gi|239999452|ref|ZP_04719376.1| ExbB [Neisseria gonorrhoeae 35/02]
gi|240014627|ref|ZP_04721540.1| ExbB [Neisseria gonorrhoeae DGI18]
gi|240017073|ref|ZP_04723613.1| ExbB [Neisseria gonorrhoeae FA6140]
gi|240081291|ref|ZP_04725834.1| ExbB [Neisseria gonorrhoeae FA19]
gi|240113499|ref|ZP_04727989.1| ExbB [Neisseria gonorrhoeae MS11]
gi|240116150|ref|ZP_04730212.1| ExbB [Neisseria gonorrhoeae PID18]
gi|240118433|ref|ZP_04732495.1| ExbB [Neisseria gonorrhoeae PID1]
gi|240121151|ref|ZP_04734113.1| ExbB [Neisseria gonorrhoeae PID24-1]
gi|240123977|ref|ZP_04736933.1| ExbB [Neisseria gonorrhoeae PID332]
gi|240126179|ref|ZP_04739065.1| ExbB [Neisseria gonorrhoeae SK-92-679]
gi|240128656|ref|ZP_04741317.1| ExbB [Neisseria gonorrhoeae SK-93-1035]
gi|254494167|ref|ZP_05107338.1| biopolymer transporter exbB [Neisseria gonorrhoeae 1291]
gi|260440039|ref|ZP_05793855.1| ExbB [Neisseria gonorrhoeae DGI2]
gi|268599567|ref|ZP_06133734.1| biopolymer transporter exbB [Neisseria gonorrhoeae MS11]
gi|268601815|ref|ZP_06135982.1| biopolymer transporter exbB [Neisseria gonorrhoeae PID18]
gi|268604147|ref|ZP_06138314.1| biopolymer transporter exbB [Neisseria gonorrhoeae PID1]
gi|268682605|ref|ZP_06149467.1| biopolymer transporter ExbB [Neisseria gonorrhoeae PID332]
gi|268684765|ref|ZP_06151627.1| biopolymer transporter exbB [Neisseria gonorrhoeae SK-92-679]
gi|268687045|ref|ZP_06153907.1| biopolymer transporter exbB [Neisseria gonorrhoeae SK-93-1035]
gi|3913608|sp|O06433|EXBB_NEIGO RecName: Full=Biopolymer transport protein exbB
gi|2098622|gb|AAC45287.1| ExbB [Neisseria gonorrhoeae]
gi|193934445|gb|ACF30269.1| ExbB [Neisseria gonorrhoeae NCCP11945]
gi|226513207|gb|EEH62552.1| biopolymer transporter exbB [Neisseria gonorrhoeae 1291]
gi|268583698|gb|EEZ48374.1| biopolymer transporter exbB [Neisseria gonorrhoeae MS11]
gi|268585946|gb|EEZ50622.1| biopolymer transporter exbB [Neisseria gonorrhoeae PID18]
gi|268588278|gb|EEZ52954.1| biopolymer transporter exbB [Neisseria gonorrhoeae PID1]
gi|268622889|gb|EEZ55289.1| biopolymer transporter ExbB [Neisseria gonorrhoeae PID332]
gi|268625049|gb|EEZ57449.1| biopolymer transporter exbB [Neisseria gonorrhoeae SK-92-679]
gi|268627329|gb|EEZ59729.1| biopolymer transporter exbB [Neisseria gonorrhoeae SK-93-1035]
gi|317164700|gb|ADV08241.1| ExbB [Neisseria gonorrhoeae TCDC-NG08107]
Length = 220
Score = 161 bits (408), Expect = 6e-38, Method: Composition-based stats.
Identities = 33/219 (15%), Positives = 94/219 (42%), Gaps = 3/219 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+++ +F + + L+ + S ++W +++ + + R+ ++ SL
Sbjct: 1 MNLKLVFESGDPVLIGVFVLMLLMSTVTWCLVVLRCIKLYRARKGNAAVKRHMRDTLSLN 60
Query: 71 TVCKSLK--NHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ ++ + LA + + ++++ + + + + + ++A+ +
Sbjct: 61 DAVEKVRAVDAPLSKLAQEALQSYRNYRRNEASELAQALPLNEYLVIQIRNSMAQIMRRF 120
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLC 187
++ L S+ + +G+ G V G+ +I ++ ++ G I E+L++ GL
Sbjct: 121 DYGMTALASIGATAPFIGLFGTVWGIYHALINIGQSGQMSIAAVAGPIGEALVATAAGLF 180
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
V+IP+ +AYN +K ++ A++ L Q +
Sbjct: 181 VAIPAVLAYNFLNRGTKILTQDLDAMAHDLHVRLLNQKD 219
>gi|78186494|ref|YP_374537.1| ExbB/TolQ family protein [Chlorobium luteolum DSM 273]
gi|78166396|gb|ABB23494.1| Cell division and transport-associated protein TolQ [Chlorobium
luteolum DSM 273]
Length = 222
Score = 161 bits (408), Expect = 6e-38, Method: Composition-based stats.
Identities = 55/209 (26%), Positives = 105/209 (50%), Gaps = 3/209 (1%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
I AL Q G V ++ +L +FS++SW++I QK + + F F+ Q +E +
Sbjct: 8 ILALLSQAGPVVLFVLGILLLFSVVSWAIIFQKFTFVRKSMLESKAFLDSFFQSQGVERI 67
Query: 73 CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKL 132
+N+ + LA +F +A E++ + + RI R + E++ +++ +
Sbjct: 68 FAESENYRDASLAKVFRAAYIEYRALGENPGAGDA--RTRIARAVKREGNLEVKRLSQLV 125
Query: 133 SFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCVSIP 191
FL ++ + +G+ G V G+M FQ+I S ++ ++ PGI E+L++ GL +IP
Sbjct: 126 PFLATVGNTAPFIGLFGTVWGIMDAFQNIGMVQSASLAAVAPGISEALVATAAGLAAAIP 185
Query: 192 SSIAYNKFIEDSKKFAMQMEGFANEFSAI 220
+ + YN +E F+ EF+A+
Sbjct: 186 AVMGYNYLSLQVGIIERDIEEFSPEFTAV 214
>gi|59801726|ref|YP_208438.1| ExbB [Neisseria gonorrhoeae FA 1090]
gi|59718621|gb|AAW90026.1| transport protein [Neisseria gonorrhoeae FA 1090]
Length = 236
Score = 161 bits (408), Expect = 7e-38, Method: Composition-based stats.
Identities = 33/219 (15%), Positives = 94/219 (42%), Gaps = 3/219 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+++ +F + + L+ + S ++W +++ + + R+ ++ SL
Sbjct: 17 MNLKLVFESGDPVLIGVFVLMLLMSTVTWCLVVLRCIKLYRARKGNAAVKRHMRDTLSLN 76
Query: 71 TVCKSLK--NHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ ++ + LA + + ++++ + + + + + ++A+ +
Sbjct: 77 DAVEKVRAVDAPLSKLAQEALQSYRNYRRNEASELAQALPLNEYLVIQIRNSMAQIMRRF 136
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLC 187
++ L S+ + +G+ G V G+ +I ++ ++ G I E+L++ GL
Sbjct: 137 DYGMTALASIGATAPFIGLFGTVWGIYHALINIGQSGQMSIAAVAGPIGEALVATAAGLF 196
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
V+IP+ +AYN +K ++ A++ L Q +
Sbjct: 197 VAIPAVLAYNFLNRGTKILTQDLDAMAHDLHVRLLNQKD 235
>gi|56416595|ref|YP_153669.1| TolQ protein [Anaplasma marginale str. St. Maries]
gi|222474962|ref|YP_002563377.1| TOLQ protein (tolQ) [Anaplasma marginale str. Florida]
gi|56387827|gb|AAV86414.1| TolQ protein [Anaplasma marginale str. St. Maries]
gi|222419098|gb|ACM49121.1| TOLQ protein (tolQ) [Anaplasma marginale str. Florida]
Length = 230
Score = 161 bits (408), Expect = 8e-38, Method: Composition-based stats.
Identities = 53/211 (25%), Positives = 106/211 (50%), Gaps = 10/211 (4%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+S+ F + VK + +L FS++SWSVI++K + R+ RE E+ F S ++
Sbjct: 24 LSMLGAFSNADIVVKATMLILVAFSVISWSVILKKHLVLRKRAREIRELEERFSSRRTFT 83
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
+ + + + I ++ I M + ++ Q + R + ++R L+++ +
Sbjct: 84 NLTEIIGHSTGI-VSQILNYGM--------QNSKLVTNKQAGLHRFVSAELSRTLDKLED 134
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCVS 189
+ L ++ S+ +G+ G V G++G +SI S + S+ PG+ E+L + LGL V+
Sbjct: 135 NVELLATIGSSSPFIGLFGTVWGVVGSLRSIPAGASVGIASVGPGMAEALFATALGLLVA 194
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFANEFSAI 220
IP++I YN+F + + ++ E A
Sbjct: 195 IPANIFYNRFTALITRMSNRLSNLVCELEAF 225
>gi|225023691|ref|ZP_03712883.1| hypothetical protein EIKCOROL_00554 [Eikenella corrodens ATCC
23834]
gi|224943573|gb|EEG24782.1| hypothetical protein EIKCOROL_00554 [Eikenella corrodens ATCC
23834]
Length = 218
Score = 161 bits (407), Expect = 8e-38, Method: Composition-based stats.
Identities = 46/219 (21%), Positives = 102/219 (46%), Gaps = 4/219 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+++ +F Q + + + LL + S+L+W +II +S +R R + + SL+
Sbjct: 1 MNLGHVFAQGDIVLITVFLLLLLMSVLTWWIIIMRSFRLHQVRHANRGTIESVATVASLD 60
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGAR--SPIGIQDRIDRMMDVAIARELEEI 128
+ + L H LA + +A+ ++ A + I + D + + + + +
Sbjct: 61 DMLR-LAKAHPSPLADLTEAAIQAARQYRANPASQLTSIPLGDYLVQHIRHKMDIAKRGL 119
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLC 187
L+ L S+ + +G+ G V G+ ++I+ N+ ++ G I E+L++ +GL
Sbjct: 120 NGGLTILASVGATAPFIGLFGTVWGIYHALENISQQGQVNIATVAGPIGEALVATAVGLF 179
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ +AYN + +K+ M+ +A + + E
Sbjct: 180 AAIPAVLAYNFIVFGNKQVVQDMDAYAYDLHVKIMNNKE 218
>gi|325142887|gb|EGC65252.1| ExbB [Neisseria meningitidis 961-5945]
Length = 216
Score = 161 bits (407), Expect = 9e-38, Method: Composition-based stats.
Identities = 33/214 (15%), Positives = 93/214 (43%), Gaps = 3/214 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+++ +F + + L+ + SI++W +++ + + R+ ++ SL
Sbjct: 1 MNLKLVFESGDPVLIGVFVLMLLMSIVTWCLVVLRCIKLYRARKGNAAVKRHMRDTLSLN 60
Query: 71 TVCKSLK--NHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ ++ + LA + + ++++ + + + + + ++A+ +
Sbjct: 61 DAVEKVRAVDAPLSKLAQEALQSYRNYRRNEASELAQALPLNEYLVIQIRNSMAQIMRRF 120
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLC 187
++ L S+ + +G+ G V G+ +I ++ ++ G I E+L++ GL
Sbjct: 121 DYGMTALASIGATAPFIGLFGTVWGIYHALINIGQSGQMSIAAVAGPIGEALVATAAGLF 180
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
V+IP+ +AYN +K ++ A++ L
Sbjct: 181 VAIPAVLAYNFLNRGTKILTQDLDAMAHDLHVRL 214
>gi|261378938|ref|ZP_05983511.1| biopolymer transport protein ExbB [Neisseria cinerea ATCC 14685]
gi|269144636|gb|EEZ71054.1| biopolymer transport protein ExbB [Neisseria cinerea ATCC 14685]
Length = 219
Score = 161 bits (407), Expect = 9e-38, Method: Composition-based stats.
Identities = 41/222 (18%), Positives = 99/222 (44%), Gaps = 7/222 (3%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
MD+ + +F + + + L+ + SI++W +I+ +S+ R+ +Q + S
Sbjct: 1 MDLKL--VFESGDVVLIGVFVLMLLMSIVTWCLIVLRSIKLYQARKGNMVVKQHMSNTLS 58
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGAR---SPIGIQDRIDRMMDVAIAREL 125
L + ++ + L+ + A+ ++ A + + + + + ++A+ +
Sbjct: 59 LNDALEKVRA-VDAPLSKLAQEALQSYRNYRQNEASKLAQALPLNEYLVIQIRNSMAQIM 117
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILL 184
++ L S+ + +G+ G V G+ +I ++ ++ G I E+L+S
Sbjct: 118 RRFDYGMTALASIGATAPFIGLFGTVWGIYHALINIGQSGQMSIAAVAGPIGEALVSTAA 177
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
GL V+IP+ +AYN +K ++ A++ L Q +
Sbjct: 178 GLFVAIPAVLAYNFLNRGAKTLTQDLDAMAHDLHVRLLNQKD 219
>gi|325982383|ref|YP_004294785.1| MotA/TolQ/ExbB proton channel [Nitrosomonas sp. AL212]
gi|325531902|gb|ADZ26623.1| MotA/TolQ/ExbB proton channel [Nitrosomonas sp. AL212]
Length = 253
Score = 161 bits (407), Expect = 9e-38, Method: Composition-based stats.
Identities = 53/200 (26%), Positives = 96/200 (48%), Gaps = 5/200 (2%)
Query: 36 ILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKN----HHNIGLAAIFMSA 91
I SW +II KS+ + +R+ F + FWS SL+T LKN + LA + + A
Sbjct: 30 IASWYLIITKSIANLIAKRRVEAFLKHFWSYDSLQTARIELKNAVPDNAFSELAKMSIDA 89
Query: 92 MSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAV 151
S+ K + + G + + R + I +E + L+ + + SA +G+ G V
Sbjct: 90 TSDSKIRNIHKSLTAEGTNEFLTRTLRNGIDQEATRVENGLTLIATAGSAAPYIGLFGTV 149
Query: 152 LGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQM 210
G+ I + + G + E+LI LGL V+IP+ +AYN F+ ++ + ++
Sbjct: 150 WGIYHALIQIGLSGQGTLDKVAGPVGEALIMTALGLAVAIPAVLAYNAFVRRNRIWLARL 209
Query: 211 EGFANEFSAILSRQTEGNIS 230
E FA++ +++ + S
Sbjct: 210 EAFAHDLFVLITAGDNTDAS 229
>gi|254443562|ref|ZP_05057038.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Verrucomicrobiae bacterium DG1235]
gi|198257870|gb|EDY82178.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Verrucomicrobiae bacterium DG1235]
Length = 227
Score = 160 bits (406), Expect = 1e-37, Method: Composition-based stats.
Identities = 55/220 (25%), Positives = 102/220 (46%), Gaps = 5/220 (2%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLET 71
S+F F Q LA K II L FS+ +W+V+I K LR FE S+
Sbjct: 8 SLFTYFSQSNLAGKFIIMALAFFSVCAWAVMIGKYWELKKLRLLNLGFEHNLHRQPSVLV 67
Query: 72 VCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQ----DRIDRMMDVAIARELEE 127
+ K + A++++ A+ + + K S ++ + ++ + A+A +
Sbjct: 68 PPSTFKAPRQVPYASLYIDAVDAYHRIKAKDGESDEQLRSARVEHVENALQRALANKTLN 127
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV-SIPGIIESLISILLGL 186
+ FL ++ S G+LG V G+M F S+ + + PG+ +L++ + GL
Sbjct: 128 YESSMVFLATIVSGAPFFGLLGTVWGVMDAFGSMGLQANATLQNLAPGVSGALLTTVAGL 187
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
CV+IPS YN + +K ++E FA+ + ++ ++
Sbjct: 188 CVAIPSVFGYNYLLSRTKILVTELENFASALADVIELESR 227
>gi|268595270|ref|ZP_06129437.1| biopolymer transporter exbB [Neisseria gonorrhoeae 35/02]
gi|268597397|ref|ZP_06131564.1| biopolymer transporter exbB [Neisseria gonorrhoeae FA19]
gi|291043325|ref|ZP_06569048.1| biopolymer transporter exbB [Neisseria gonorrhoeae DGI2]
gi|293398636|ref|ZP_06642814.1| biopolymer transporter ExbB [Neisseria gonorrhoeae F62]
gi|268548659|gb|EEZ44077.1| biopolymer transporter exbB [Neisseria gonorrhoeae 35/02]
gi|268551185|gb|EEZ46204.1| biopolymer transporter exbB [Neisseria gonorrhoeae FA19]
gi|291012931|gb|EFE04914.1| biopolymer transporter exbB [Neisseria gonorrhoeae DGI2]
gi|291611107|gb|EFF40204.1| biopolymer transporter ExbB [Neisseria gonorrhoeae F62]
Length = 230
Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats.
Identities = 33/219 (15%), Positives = 94/219 (42%), Gaps = 3/219 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+++ +F + + L+ + S ++W +++ + + R+ ++ SL
Sbjct: 11 MNLKLVFESGDPVLIGVFVLMLLMSTVTWCLVVLRCIKLYRARKGNAAVKRHMRDTLSLN 70
Query: 71 TVCKSLK--NHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ ++ + LA + + ++++ + + + + + ++A+ +
Sbjct: 71 DAVEKVRAVDAPLSKLAQEALQSYRNYRRNEASELAQALPLNEYLVIQIRNSMAQIMRRF 130
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLC 187
++ L S+ + +G+ G V G+ +I ++ ++ G I E+L++ GL
Sbjct: 131 DYGMTALASIGATAPFIGLFGTVWGIYHALINIGQSGQMSIAAVAGPIGEALVATAAGLF 190
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
V+IP+ +AYN +K ++ A++ L Q +
Sbjct: 191 VAIPAVLAYNFLNRGTKILTQDLDAMAHDLHVRLLNQKD 229
>gi|238026213|ref|YP_002910444.1| hypothetical protein bglu_1g05440 [Burkholderia glumae BGR1]
gi|237875407|gb|ACR27740.1| Hypothetical protein bglu_1g05440 [Burkholderia glumae BGR1]
Length = 229
Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats.
Identities = 47/217 (21%), Positives = 83/217 (38%), Gaps = 4/217 (1%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
D + + LL S+ SW ++ K+ + RR FW
Sbjct: 2 ATDTGVIHYLASGDAVTHAVAYLLLAMSVASWCCLLLKAWTLVRARRASAGAIAAFWRAG 61
Query: 68 SLETVCKSLKNHHNIGLAAIF---MSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARE 124
S + +L+ + A + + + + +R+ R + A+
Sbjct: 62 SFDAGLAALRAADRERVFVPLAAAADAAAREAAAGAALLGARVAPGERVLRAVREAMRGS 121
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISIL 183
+ L L S++S VG+LG V G+ SIA + S+ G + E+LI
Sbjct: 122 QRRLEFGLVLLASIASTAPFVGLLGTVWGIYHALGSIAASGQAQIGSVAGPVGEALIMTA 181
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAI 220
GL V+IP+ +AYN ++ ++GFA + A
Sbjct: 182 FGLVVAIPAVLAYNMLGRLVRQLVEDLDGFARDLHAF 218
>gi|269958989|ref|YP_003328778.1| TolQ protein [Anaplasma centrale str. Israel]
gi|269848820|gb|ACZ49464.1| TolQ protein [Anaplasma centrale str. Israel]
Length = 228
Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats.
Identities = 54/211 (25%), Positives = 107/211 (50%), Gaps = 10/211 (4%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+S+ F + VK I+ +L FSI+SWSVI++K + R+ +E E F S ++
Sbjct: 22 LSMLGAFSNADIVVKAIMLILVAFSIISWSVILKKHLTLRKQAREIKELEGRFSSRRTFT 81
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
+ + + + I ++ I + + ++ Q + R + ++R L+++ +
Sbjct: 82 NLSEIVGSSTGI-VSQILNYGI--------QNSKLVTNKQAGLHRFVSAELSRTLDKLED 132
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCVS 189
+ L ++ S+ +G+LG V G++G +SI S + S+ PG+ E+L + LGL V+
Sbjct: 133 NVEILATIGSSSPFIGLLGTVWGVVGSLRSIPTGVSVGIASVGPGVAEALFATALGLLVA 192
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFANEFSAI 220
IP++I YN+F + + ++ E A
Sbjct: 193 IPANIFYNRFTALITRMSNRLSNLVYELEAF 223
>gi|241767823|ref|ZP_04765411.1| MotA/TolQ/ExbB proton channel [Acidovorax delafieldii 2AN]
gi|241361113|gb|EER57786.1| MotA/TolQ/ExbB proton channel [Acidovorax delafieldii 2AN]
Length = 210
Score = 159 bits (404), Expect = 2e-37, Method: Composition-based stats.
Identities = 46/208 (22%), Positives = 84/208 (40%), Gaps = 5/208 (2%)
Query: 24 VKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIG 83
+ LL S+ SW VI K FW SL+ + L++
Sbjct: 2 TQVAALLLLAMSVASWVVIFWKLRLMHRATGDVARCTAAFWQAPSLDAAVQRLQSFDREA 61
Query: 84 LAAIFMSAMSEWKK----SCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMS 139
L + A + + + + + ++ R++ A+ L + L ++
Sbjct: 62 LVLPMVVAANSVAQDGAAAPQATLATAGSLSQQLTRVLRDALHGALGRLQWGQVLLATVG 121
Query: 140 SAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIPSSIAYNK 198
S VG+LG V G+ ++AG + + G + E+L+ GL V+IP+ +AYN
Sbjct: 122 STAPFVGLLGTVWGIYHALTAMAGAGQITIDRVAGPVGEALVMTAAGLAVAIPAVLAYNV 181
Query: 199 FIEDSKKFAMQMEGFANEFSAILSRQTE 226
F + +EGFA + +L++ E
Sbjct: 182 FGRFVGRIEADLEGFARDLRELLAQHPE 209
>gi|296134543|ref|YP_003641785.1| MotA/TolQ/ExbB proton channel [Thiomonas intermedia K12]
gi|294338478|emb|CAZ86804.1| Biopolymer transport ExbB protein [Thiomonas sp. 3As]
gi|295794665|gb|ADG29455.1| MotA/TolQ/ExbB proton channel [Thiomonas intermedia K12]
Length = 217
Score = 159 bits (404), Expect = 2e-37, Method: Composition-based stats.
Identities = 47/207 (22%), Positives = 88/207 (42%), Gaps = 3/207 (1%)
Query: 17 FMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSL 76
+ Q + +L S+ SW VI+ K+ R+ +W S +
Sbjct: 8 WQQGDALSHLVALVLLAMSVASWFVILWKAALLWRATRRVPAGIAAYWGAASPLQAAAAT 67
Query: 77 KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLG 136
++ GL+++ S + + A +DR+ R + A+ + L
Sbjct: 68 QSADPDGLSSLMAETAS--RLARPDTAHRWQSHEDRVTRELREALQAAQRRLQAGHVLLA 125
Query: 137 SMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIPSSIA 195
S+ S VG+ G V G+ +IA +V + G + E+LI GL V+IP+ +A
Sbjct: 126 SVGSTAPFVGLFGTVWGIYHALTAIAASGQISVDKVAGPVGETLIMTAAGLAVAIPAVLA 185
Query: 196 YNKFIEDSKKFAMQMEGFANEFSAILS 222
YN + +++ +EGFA++ +L+
Sbjct: 186 YNALSKRARRVQGALEGFAHDLQRLLA 212
>gi|149924036|ref|ZP_01912419.1| MotA/TolQ/ExbB proton channel [Plesiocystis pacifica SIR-1]
gi|149815119|gb|EDM74672.1| MotA/TolQ/ExbB proton channel [Plesiocystis pacifica SIR-1]
Length = 240
Score = 159 bits (403), Expect = 2e-37, Method: Composition-based stats.
Identities = 51/226 (22%), Positives = 108/226 (47%), Gaps = 10/226 (4%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREF---EQLFWS 65
D S+ ++ QMG+ K ++ +L I +++ + I++ + + + Q + + F +
Sbjct: 12 TDFSLSGMWAQMGIFAKLVLIVLIIQFVITLIMSIERLMVYNKAKSQSISYIMMLRNFLN 71
Query: 66 GQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDK------GARSPIGIQDRIDRMMDV 119
+ LE ++K H + +A + S M E+ + + I D ++R M+
Sbjct: 72 ERKLEDAVAAVKQHSSSPVAKVVGSGMDEYLQGLEALQEEGPDDVGDFDIVDAVNRQMER 131
Query: 120 AIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV-SIPGIIES 178
RE + + L+ + + S VG+LG V+G++ FQ ++ + GI E+
Sbjct: 132 TKERETANLKKGLALVATTGSTAPFVGLLGTVVGIINSFQGLSSDGGGGLSSVAGGISEA 191
Query: 179 LISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
L++ +GL V+IP+ +A+N F + F + M A+E + ++
Sbjct: 192 LVATAVGLIVAIPAVMAFNYFNSRVEGFQIDMNDVASEVINYVLKE 237
>gi|330975325|gb|EGH75391.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. aptata str.
DSM 50252]
Length = 151
Score = 159 bits (402), Expect = 3e-37, Method: Composition-based stats.
Identities = 39/142 (27%), Positives = 71/142 (50%), Gaps = 2/142 (1%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLET 71
S+++L + V+ ++ +L S+ SW VI Q+S RR FE+ FWSG L
Sbjct: 10 SMWSLVSNASIVVQLVMLILVAASVTSWIVIFQRSNMLRAGRRALDSFEERFWSGIDLSK 69
Query: 72 VCKSLKNH--HNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+ + ++ + G+ IF + E+ + + P + + + R M VAI+RE +++
Sbjct: 70 LYRQAGSNPDPDSGVEQIFRAGFKEFSRLRQQSGVDPDAVMEGVARAMRVAISREEKKLE 129
Query: 130 EKLSFLGSMSSAGLLVGILGAV 151
L +L ++ S VG+ G V
Sbjct: 130 AGLPYLATVGSTSPYVGLFGTV 151
>gi|116619648|ref|YP_821804.1| MotA/TolQ/ExbB proton channel [Candidatus Solibacter usitatus
Ellin6076]
gi|116222810|gb|ABJ81519.1| MotA/TolQ/ExbB proton channel [Candidatus Solibacter usitatus
Ellin6076]
Length = 237
Score = 159 bits (402), Expect = 3e-37, Method: Composition-based stats.
Identities = 54/212 (25%), Positives = 107/212 (50%), Gaps = 3/212 (1%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
++ + G A K ++ +L FS+ SW+ I K R+ F + F +E V
Sbjct: 24 LWDMVQHTGPAGKVVLVVLVFFSVSSWTFIFSKLSALRGARQSNARFLRAFRKSSGMEAV 83
Query: 73 CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKL 132
+ + L A+F E ++ +R I + ++R + + + E+ ++ +
Sbjct: 84 MVASEQFRPSPLVAVFDFGYEELERQVK--SRGSIVNRTALERTLQLGVNEEISKLERNM 141
Query: 133 SFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCVSIP 191
S+L + +S +G+LG VLG++ F+ ++ S ++ +I PGI E+LI+ +GL +IP
Sbjct: 142 SWLATTASVTPFIGLLGTVLGIIRAFEDLSQMGSTSIKAIGPGIAEALITTAVGLFAAIP 201
Query: 192 SSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
+++ YN F +++ +M+ FA EF + R
Sbjct: 202 AAVFYNYFGHVTREIGARMDDFAMEFLNMADR 233
>gi|115525151|ref|YP_782062.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris BisA53]
gi|115519098|gb|ABJ07082.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris BisA53]
Length = 262
Score = 159 bits (402), Expect = 3e-37, Method: Composition-based stats.
Identities = 49/217 (22%), Positives = 96/217 (44%), Gaps = 5/217 (2%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
++S + +F+ + V+ ++ L + S+ +W+V + K+V + L S +L
Sbjct: 38 NLSPWGMFVAADMVVQTVMVGLALASLATWTVWLSKTVEIRRETAVAKRRLALLESDIAL 97
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+ + A + SA+ E S G G ++R+ ++ A +I
Sbjct: 98 TVAEAECGDATDAA-AQLIQSAVREASLS---GVVPDDGFKERVALRLERVEAAMARKIA 153
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCV 188
L S+ + VG+ G V G+M F I+ +S N+ V PGI E+L++ LGL
Sbjct: 154 IGTGVLASIGAVAPFVGLFGTVWGIMNAFIGISEAHSTNLAVVAPGIAEALLATALGLVA 213
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ + YN+ + + + ++SR+
Sbjct: 214 AIPAVVIYNRLARQIAAYRALLADASALVLLLVSREA 250
>gi|294056290|ref|YP_003549948.1| MotA/TolQ/ExbB proton channel [Coraliomargarita akajimensis DSM
45221]
gi|293615623|gb|ADE55778.1| MotA/TolQ/ExbB proton channel [Coraliomargarita akajimensis DSM
45221]
Length = 244
Score = 159 bits (402), Expect = 3e-37, Method: Composition-based stats.
Identities = 54/224 (24%), Positives = 104/224 (46%), Gaps = 5/224 (2%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLET 71
++F F Q A K +I +L + S+L+WSV++ K ++ LR Q + +E+L L
Sbjct: 19 NVFTYFAQSNFAGKIVILILVVCSVLAWSVMLGKYMDMSRLRSQNQRYERLLSRESHLLA 78
Query: 72 VCKSLKNHHNIGLAAIFMSAMSEWKK----SCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ S I + + + D ++ + +A +
Sbjct: 79 LDPSRPGKGAGPYYNIVREGLEAFFRYGGDLADPDTHRATLRMGHVENALQRGVADQTIR 138
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVS-IPGIIESLISILLGL 186
K+ LGS+ + +G+LG V G+M F +AG S ++ S PG+ +L++ + GL
Sbjct: 139 YEAKMVLLGSIVTGAPFLGLLGTVWGVMDAFGGMAGSGSASLQSLAPGVSGALLTTVAGL 198
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
V+IPS YN ++ +K +++E FA+ + + + + +S
Sbjct: 199 VVAIPSVFGYNYLLQQTKISVVELENFASTVADRIELEAQAAVS 242
>gi|53720548|ref|YP_109534.1| putative transport-related membrane protein [Burkholderia
pseudomallei K96243]
gi|53725687|ref|YP_104002.1| MotA/TolQ/ExbB proton channel family protein [Burkholderia mallei
ATCC 23344]
gi|67643541|ref|ZP_00442286.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
mallei GB8 horse 4]
gi|76810545|ref|YP_334825.1| MotA/TolQ/ExbB proton channel family protein [Burkholderia
pseudomallei 1710b]
gi|121599718|ref|YP_991722.1| MotA/TolQ/ExbB proton channel family protein [Burkholderia mallei
SAVP1]
gi|124384087|ref|YP_001027215.1| MotA/TolQ/ExbB proton channel family protein [Burkholderia mallei
NCTC 10229]
gi|126450341|ref|YP_001082167.1| MotA/TolQ/ExbB proton channel family protein [Burkholderia mallei
NCTC 10247]
gi|126455098|ref|YP_001067689.1| MotA/TolQ/ExbB proton channel family protein [Burkholderia
pseudomallei 1106a]
gi|134280497|ref|ZP_01767208.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei 305]
gi|166998534|ref|ZP_02264392.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
mallei PRL-20]
gi|167847308|ref|ZP_02472816.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Burkholderia pseudomallei B7210]
gi|167895897|ref|ZP_02483299.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Burkholderia pseudomallei 7894]
gi|167904282|ref|ZP_02491487.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Burkholderia pseudomallei NCTC 13177]
gi|167912543|ref|ZP_02499634.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Burkholderia pseudomallei 112]
gi|167920497|ref|ZP_02507588.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Burkholderia pseudomallei BCC215]
gi|217420858|ref|ZP_03452363.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei 576]
gi|237813819|ref|YP_002898270.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei MSHR346]
gi|242316904|ref|ZP_04815920.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei 1106b]
gi|254178827|ref|ZP_04885481.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
mallei ATCC 10399]
gi|254190926|ref|ZP_04897432.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei Pasteur 52237]
gi|254199076|ref|ZP_04905491.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei S13]
gi|254202721|ref|ZP_04909084.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
mallei FMH]
gi|254208062|ref|ZP_04914412.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
mallei JHU]
gi|254258328|ref|ZP_04949382.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei 1710a]
gi|254299273|ref|ZP_04966723.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei 406e]
gi|52210962|emb|CAH36950.1| putative transport-related membrane protein [Burkholderia
pseudomallei K96243]
gi|52429110|gb|AAU49703.1| MotA/TolQ/ExbB proton channel family protein [Burkholderia mallei
ATCC 23344]
gi|76579998|gb|ABA49473.1| MotA/TolQ/ExbB proton channel family protein [Burkholderia
pseudomallei 1710b]
gi|121228528|gb|ABM51046.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
mallei SAVP1]
gi|124292107|gb|ABN01376.1| MotA/TolQ/ExbB proton channel family protein [Burkholderia mallei
NCTC 10229]
gi|126228740|gb|ABN92280.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei 1106a]
gi|126243211|gb|ABO06304.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
mallei NCTC 10247]
gi|134248504|gb|EBA48587.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei 305]
gi|147746968|gb|EDK54045.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
mallei FMH]
gi|147751956|gb|EDK59023.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
mallei JHU]
gi|157808866|gb|EDO86036.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei 406e]
gi|157938600|gb|EDO94270.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei Pasteur 52237]
gi|160694741|gb|EDP84749.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
mallei ATCC 10399]
gi|169656906|gb|EDS88303.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei S13]
gi|217396270|gb|EEC36287.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei 576]
gi|237504130|gb|ACQ96448.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei MSHR346]
gi|238524909|gb|EEP88339.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
mallei GB8 horse 4]
gi|242140143|gb|EES26545.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei 1106b]
gi|243065219|gb|EES47405.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
mallei PRL-20]
gi|254217017|gb|EET06401.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei 1710a]
Length = 235
Score = 159 bits (402), Expect = 3e-37, Method: Composition-based stats.
Identities = 44/213 (20%), Positives = 82/213 (38%), Gaps = 4/213 (1%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
I + +L SI SW ++ K+ + +RQ FW +L+
Sbjct: 7 ILHYLASGDAVTHAVAYVLLAMSIASWCFLLVKAWVLVRAKRQGPAALAAFWRAATLDDG 66
Query: 73 CKSLKNHHNIGLAAIF---MSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+L+ + A + + + +R+ R + A+ +
Sbjct: 67 IAALRAADKERVFAPLAEAAREADAASRVEPHALAARVERGERVLRALRHALRASQRRLE 126
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCV 188
L S+ S VG+LG V G+ SIA + ++ G + E+LI GL V
Sbjct: 127 FGQVLLASIGSTAPFVGLLGTVWGIYHALGSIAASGQAQIENVAGPVGEALIMTAFGLVV 186
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+IP+ +AYN ++ +++GFA + +
Sbjct: 187 AIPAVLAYNILGRLVRQLVEELDGFARDLHVFV 219
>gi|158522224|ref|YP_001530094.1| Tol-Pal system TolQ [Desulfococcus oleovorans Hxd3]
gi|158511050|gb|ABW68017.1| Tol-Pal system TolQ [Desulfococcus oleovorans Hxd3]
Length = 240
Score = 158 bits (401), Expect = 4e-37, Method: Composition-based stats.
Identities = 53/199 (26%), Positives = 89/199 (44%), Gaps = 10/199 (5%)
Query: 38 SWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKK 97
SW++I K RQ EF + FW + KN + +A +F + SE+K+
Sbjct: 32 SWTIIFIKYTYIRHALRQSLEFSEYFWKKRDFSEAFAKAKNLDSSPVAQVFRAGYSEFKR 91
Query: 98 SCDKGARSPIGIQDR---------IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGIL 148
R+ G + I+R + I E ++ + FL + + +G+
Sbjct: 92 FSTPSTRTGSGESENNFDVPVIKSIERALSRGITAETAKLNRLVPFLATTGNTTPFIGLF 151
Query: 149 GAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFA 207
G V G+M F I + ++ V PGI E+L++ GL +IP+ +AYN F +
Sbjct: 152 GTVWGIMNSFHGIGERGAASLAVVAPGISEALVATAAGLAAAIPAVVAYNYFTGKIRVID 211
Query: 208 MQMEGFANEFSAILSRQTE 226
+M FA++F I+ RQ
Sbjct: 212 SEMRNFASDFLNIIERQVH 230
>gi|117619942|ref|YP_856517.1| MotA/TolQ/ExbB proton channel family protein [Aeromonas hydrophila
subsp. hydrophila ATCC 7966]
gi|117561349|gb|ABK38297.1| MotA/TolQ/ExbB proton channel family protein [Aeromonas hydrophila
subsp. hydrophila ATCC 7966]
Length = 251
Score = 158 bits (401), Expect = 4e-37, Method: Composition-based stats.
Identities = 48/227 (21%), Positives = 99/227 (43%), Gaps = 7/227 (3%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
M+ +A + I L Q LL + S+ + + K +R F
Sbjct: 1 MDPE-IASNGMGIAHLLSQNSGVGLIPFILLVLMSLGTCYYALLKGYLAQREQRLNARFI 59
Query: 61 QLFWSGQSLETVCKSLKNHHN----IGLAAIFMSAMSEWKKSCDKGARSPIGI-QDRIDR 115
FW S++ + + L + L ++A+++ ++ ++ +G + + R
Sbjct: 60 ADFWQHDSVQEMERQLAHLPPQEAYGRLTGAALAAVAQLNRAEERAVSCKLGSPDEYLLR 119
Query: 116 MMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG- 174
M AI +E + + L+FL S+ SA +G+ G V G+ +I +++ + G
Sbjct: 120 AMRRAITQERVRLEQGLAFLASVGSAAPFIGLFGTVWGIYHALLAIGAAGQSSLDKVAGP 179
Query: 175 IIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+ E+LI GL V++P+ + YN F+ ++ +E F ++ +L
Sbjct: 180 VGEALIMTGFGLAVALPAVLIYNFFVRRNRLRLAALEEFGHDLFTLL 226
>gi|115373681|ref|ZP_01460975.1| adventurous gliding motility protein X [Stigmatella aurantiaca
DW4/3-1]
gi|115369228|gb|EAU68169.1| adventurous gliding motility protein X [Stigmatella aurantiaca
DW4/3-1]
Length = 191
Score = 158 bits (401), Expect = 4e-37, Method: Composition-based stats.
Identities = 48/188 (25%), Positives = 87/188 (46%), Gaps = 9/188 (4%)
Query: 45 KSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGAR 104
K+ R Q F FW LE + ++ + L+ +F + E K
Sbjct: 2 KATQLSRARSQSLTFLDTFWKATRLEGIYQTAQGLEGSPLSKVFCAGYEELSKLAQAKEG 61
Query: 105 SPIGIQDR------IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFF 158
+ + DR ++R + A ++ E+ ++ FLG++ +A VG+ G V+G++ F
Sbjct: 62 TDGAMSDRLGGIENVERALHRAATTQITELEARVPFLGTVGAAAPFVGLFGTVIGILNAF 121
Query: 159 QSIA--GYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANE 216
IA G + + V+ P + +L + GL +IP+ +AYN F+ K F +M F+ +
Sbjct: 122 NEIADKGNATLSTVAAP-VGNALFATAAGLFAAIPAVVAYNSFVSRIKIFDTEMSNFSAD 180
Query: 217 FSAILSRQ 224
F I+ R
Sbjct: 181 FLNIIKRH 188
>gi|83721248|ref|YP_441756.1| MotA/TolQ/ExbB proton channel family protein [Burkholderia
thailandensis E264]
gi|167580571|ref|ZP_02373445.1| MotA/TolQ/ExbB proton channel family protein [Burkholderia
thailandensis TXDOH]
gi|257137923|ref|ZP_05586185.1| MotA/TolQ/ExbB proton channel family protein [Burkholderia
thailandensis E264]
gi|83655073|gb|ABC39136.1| MotA/TolQ/ExbB proton channel family protein [Burkholderia
thailandensis E264]
Length = 235
Score = 158 bits (400), Expect = 6e-37, Method: Composition-based stats.
Identities = 45/216 (20%), Positives = 84/216 (38%), Gaps = 10/216 (4%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
I + +L SI SW ++ K+ + +RQ FW +L+
Sbjct: 7 ILHYLESGDAVTHAVAYVLLAMSIASWCFLLVKAWVLVRAKRQGPAALAAFWRAATLDDG 66
Query: 73 CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQ------DRIDRMMDVAIARELE 126
+L+ +F+ + + P + +R+ R + A+
Sbjct: 67 LAALRAADK---ERVFLPLAEAARDADAASRIEPHALSARVERGERVLRALRHALRASQR 123
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLG 185
+ L S+ S VG+LG V G+ SIA + ++ G + E+LI G
Sbjct: 124 RLEFGQVLLASIGSTAPFVGLLGTVWGIYHALGSIAASGQAQIENVAGPVGEALIMTAFG 183
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
L V+IP+ +AYN ++ +++GFA + +
Sbjct: 184 LVVAIPAVLAYNILGRLVRQLVEELDGFARDLHVFV 219
>gi|257095500|ref|YP_003169141.1| MotA/TolQ/ExbB proton channel [Candidatus Accumulibacter phosphatis
clade IIA str. UW-1]
gi|257048024|gb|ACV37212.1| MotA/TolQ/ExbB proton channel [Candidatus Accumulibacter phosphatis
clade IIA str. UW-1]
Length = 239
Score = 158 bits (400), Expect = 6e-37, Method: Composition-based stats.
Identities = 52/218 (23%), Positives = 96/218 (44%), Gaps = 2/218 (0%)
Query: 7 AIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG 66
AI + + + ++ L + SI SW +I+ +++ +R+ EF + FW
Sbjct: 5 AINSLGFAHFLTETDGVGRSVLAALLLLSIASWYLIVTRALANAIAQRRAEEFLRRFWQA 64
Query: 67 QSLETVCKSLKNHHNIGLAAIF-MSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
SL V +L H A ++ S + G+ + + R ++ + RE
Sbjct: 65 SSLSEVETTLGAHAADNAFAALARKSLDALADSSRESLAVAGGMAEYLTRTLNNEVDREA 124
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGI-IESLISILL 184
+ L+ L S SA +G+ G V G+ I + + G E+LI L
Sbjct: 125 AKAEYGLTVLASAGSAAPYIGLFGTVWGIYHALVQIGLSGQGTLDKVAGPEGEALIMTAL 184
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
GL V+IP+ +AYN F ++ + ++E FA++ +L+
Sbjct: 185 GLAVAIPAVLAYNAFNRRNRVWLARLESFAHDLYVLLT 222
>gi|126442171|ref|YP_001060428.1| MotA/TolQ/ExbB proton channel family protein [Burkholderia
pseudomallei 668]
gi|126221664|gb|ABN85170.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei 668]
Length = 235
Score = 158 bits (399), Expect = 7e-37, Method: Composition-based stats.
Identities = 43/213 (20%), Positives = 81/213 (38%), Gaps = 4/213 (1%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
I + +L SI SW ++ K+ + +RQ FW +L+
Sbjct: 7 ILHYLASGDAVTHAVAYVLLAMSIASWCFLLVKAWVLVRAKRQGPAALAAFWRAATLDDG 66
Query: 73 CKSLKNHHNIGLAAIF---MSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+L+ + A + + + +R+ R + A+ +
Sbjct: 67 IAALRAADKERVFAPLAEAAREADAASRVEPHALAARVERGERVLRALRHALRASQRRLE 126
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCV 188
L S+ S VG+LG V G+ SIA + ++ G + E+L GL V
Sbjct: 127 FGQVLLASIGSTAPFVGLLGTVWGIYHALGSIAASGQAQIENVAGPVGEALTMTAFGLVV 186
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+IP+ +AYN ++ +++GFA + +
Sbjct: 187 AIPAVLAYNILGRLVRQLVEELDGFARDLHVFV 219
>gi|260177181|gb|ACX33905.1| putative MotA/TolQ/ExbB proton channel [uncultured prokaryote AT3]
Length = 245
Score = 158 bits (399), Expect = 8e-37, Method: Composition-based stats.
Identities = 49/198 (24%), Positives = 93/198 (46%), Gaps = 5/198 (2%)
Query: 38 SWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNH-HNIGLAAIFMSA---MS 93
SW +I+ + V + RR+ F FW+ SL V ++L + AA+ A +
Sbjct: 32 SWYLIVSRGVANLLARRRADRFLAEFWNADSLAAVSQTLAARQPDNAFAALAHDAILTAA 91
Query: 94 EWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLG 153
E ++ + + G + + R++ + E + L+ L S SA +G+ G V G
Sbjct: 92 ESERHGLQKLAAVGGSGEFMTRVLRNGVDMEAARVESGLTVLASAGSAAPYIGLFGTVWG 151
Query: 154 MMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEG 212
+ +I + + G + E+LI LGL V+IP+ +AYN F ++ + +++
Sbjct: 152 IYHALVNIGLSGQGTLDKVAGPVGEALIMTALGLAVAIPAVLAYNAFARRNRIWLARLDA 211
Query: 213 FANEFSAILSRQTEGNIS 230
FA++ A+ ++ N S
Sbjct: 212 FAHDLYALTMVGSKANSS 229
>gi|124265413|ref|YP_001019417.1| putative transport-related membrane protein [Methylibium
petroleiphilum PM1]
gi|124258188|gb|ABM93182.1| putative transport-related membrane protein [Methylibium
petroleiphilum PM1]
Length = 221
Score = 157 bits (398), Expect = 9e-37, Method: Composition-based stats.
Identities = 44/209 (21%), Positives = 83/209 (39%), Gaps = 3/209 (1%)
Query: 14 FALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVC 73
+ + + + LL + S+ +W +I KS +R FW+ L
Sbjct: 1 MHFWSEGDAITRLVAALLLLMSVSAWVLIFWKSWLLRRVRADLARAVPAFWAAPDLAAAR 60
Query: 74 KSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLS 133
L+ + A + + A Q + R + A+ L ++
Sbjct: 61 TQLQIFDREAALVPLLDAGLQSARGGTLEAAGARASQ--LTRRLRDALHGVLMQLQFGQV 118
Query: 134 FLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIPS 192
L S+ + +G+ G V G+ IA + ++ I G + E+L+ GL V+IP+
Sbjct: 119 LLASIGATAPFIGLFGTVWGIYHALLGIAAAGNLSIDRISGPVGEALVMTAAGLAVAIPA 178
Query: 193 SIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+AYN F + ++EGFA++ +L
Sbjct: 179 VLAYNVFGKLVGACEAELEGFAHDLREML 207
>gi|167618681|ref|ZP_02387312.1| MotA/TolQ/ExbB proton channel family protein [Burkholderia
thailandensis Bt4]
Length = 235
Score = 157 bits (397), Expect = 1e-36, Method: Composition-based stats.
Identities = 45/216 (20%), Positives = 84/216 (38%), Gaps = 10/216 (4%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
I + +L SI SW ++ K+ + +RQ FW +L+
Sbjct: 7 ILHYLESGDAVTHAVAYVLLAMSIASWCFLLVKAWVLVRAKRQGPAALAAFWRAATLDDG 66
Query: 73 CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQ------DRIDRMMDVAIARELE 126
+L+ +F+ + + P + +R+ R + A+
Sbjct: 67 LAALRAADK---ERVFLPLAEAARDADAASRIEPHALAARVERGERVLRALRHALRASQR 123
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLG 185
+ L S+ S VG+LG V G+ SIA + ++ G + E+LI G
Sbjct: 124 RLEFGQVLLASIGSTAPFVGLLGTVWGIYHALGSIAASGQAQIENVAGPVGEALIMTAFG 183
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
L V+IP+ +AYN ++ +++GFA + +
Sbjct: 184 LVVAIPAVLAYNILGRLVRQLVEELDGFARDLHVFV 219
>gi|149187086|ref|ZP_01865391.1| biopolymer transport ExbB protein [Erythrobacter sp. SD-21]
gi|148829238|gb|EDL47684.1| biopolymer transport ExbB protein [Erythrobacter sp. SD-21]
Length = 270
Score = 156 bits (396), Expect = 2e-36, Method: Composition-based stats.
Identities = 43/210 (20%), Positives = 86/210 (40%), Gaps = 5/210 (2%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+ + G I+ ++ I S+ S+ ++ K + +Q++ FW SL+
Sbjct: 17 FGFWQAMEEGGPVAWSILAVMVIMSVGSFYILFTKLFEQNKVMKQYKGVRTNFWRTNSLK 76
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
L N + A+ +K + D + + + ++
Sbjct: 77 EGATKL--DKNSAWRQLVDDALVAEEKHAKLN--DQMEAHDWMHGSLARSEHAIQAKLNG 132
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVS 189
L FL ++ + VG+LG V+G+ +I S ++ + G + E+LI +GL V+
Sbjct: 133 GLPFLATVGATAPFVGLLGTVIGIYRALINIGVAGSASIDKVAGPVGEALIMTAIGLLVA 192
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
+P+ AYN ++K M GF+ + A
Sbjct: 193 VPAVFAYNWLQSRNRKIFDMMSGFSTDLLA 222
>gi|83954608|ref|ZP_00963319.1| biopolymer transport protein ExbB [Sulfitobacter sp. NAS-14.1]
gi|83840892|gb|EAP80063.1| biopolymer transport protein ExbB [Sulfitobacter sp. NAS-14.1]
Length = 287
Score = 156 bits (395), Expect = 2e-36, Method: Composition-based stats.
Identities = 50/216 (23%), Positives = 91/216 (42%), Gaps = 7/216 (3%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLET 71
S A+FM + VK ++ L I S+L +V K + + R + +++
Sbjct: 56 SPLAMFMGADIVVKAVMFGLAIASVLGLAVWAGKILQVSWANARLRRSYRKLAKAGAVKG 115
Query: 72 VCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEK 131
+ + A+ +A++E S + GI++R+ + A +
Sbjct: 116 AQAK---SFSGPMRAMIRAALAEIDIS---DGLNKAGIKERVASELSRIEAGAARAMQSG 169
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSI 190
LGS+ S +G+ G V G+M F IA S ++ V PGI E+L++ +GL +I
Sbjct: 170 AMILGSIGSTAPFIGLFGTVWGIMNSFIGIAESGSTSLTVVAPGIAEALLATAIGLVAAI 229
Query: 191 PSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
P+ + YN + ++ A LSR +
Sbjct: 230 PAVLLYNHITRVVTGYRARVGDAAALVERCLSRDLD 265
>gi|223939355|ref|ZP_03631234.1| MotA/TolQ/ExbB proton channel [bacterium Ellin514]
gi|223891959|gb|EEF58441.1| MotA/TolQ/ExbB proton channel [bacterium Ellin514]
Length = 258
Score = 156 bits (394), Expect = 3e-36, Method: Composition-based stats.
Identities = 48/222 (21%), Positives = 94/222 (42%), Gaps = 8/222 (3%)
Query: 17 FMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSL 76
F + L K I L + S+ SW+VII K RR ++F + + S + + +
Sbjct: 17 FSKATLEGKITICCLIVVSLFSWTVIITKIRQLYRARRMAKKFYESYRSTRDPLEIFRKQ 76
Query: 77 KNHHNIGLAAIFMSAMSEWKKSCDKG-------ARSPIGIQDRIDRMMDVAIARELEEIT 129
+ ++ + E R D + ++ ++ E +
Sbjct: 77 EEFDGAPANEVYYTGAEELDYHLKNNPVMVKGQTRISSAGFDSVKVSLERSVGTESLNLE 136
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCV 188
+ + L + + G +G+LG V G+M F +A S ++ PG+ +LI+ ++GL V
Sbjct: 137 KGMIVLSTAVAGGPFIGLLGTVWGVMETFSGVARANSASLTAMAPGVAGALIATVVGLLV 196
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
+IP+ AYN + + +++ FA E+ + + N S
Sbjct: 197 AIPAMFAYNFMVTSIRAITQELDNFATEYVTQIEHKYVDNRS 238
>gi|34495854|ref|NP_900069.1| exbB-like biopolymer transport [Chromobacterium violaceum ATCC
12472]
gi|34101709|gb|AAQ58077.1| probable exbB-like biopolymer transport [Chromobacterium violaceum
ATCC 12472]
Length = 225
Score = 156 bits (394), Expect = 3e-36, Method: Composition-based stats.
Identities = 51/218 (23%), Positives = 105/218 (48%), Gaps = 3/218 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+++ +F Q + + +L + S+L+W +II + V ++LRR RE E W
Sbjct: 1 MNVLTVFQQGDAVLISVFMILILMSVLTWYLIIVRGVQTLSLRRANREAENALWGAADWR 60
Query: 71 TVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
SL++ LA ++A+ +++ + G+ + + R + A+++E+
Sbjct: 61 QAEASLQHSQGQFANLARAGLAALKQYQGQAGRALGQACGVDEFLTRAIRRALSQEMARQ 120
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLC 187
L+ L S+ S VG+ G V G+ +I ++ ++ G I E+L++ GL
Sbjct: 121 ESGLTVLASIGSTAPFVGLFGTVWGIYHALVNIGHAGQMSIGAVAGPIGEALVATAAGLA 180
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ +AYN + + +++ FA++ A L Q+
Sbjct: 181 AAIPAVLAYNALTRAQRVMSQELDYFAHDLHAQLLTQS 218
>gi|163746897|ref|ZP_02154254.1| biopolymer transport protein [Oceanibulbus indolifex HEL-45]
gi|161380011|gb|EDQ04423.1| biopolymer transport protein [Oceanibulbus indolifex HEL-45]
Length = 277
Score = 156 bits (394), Expect = 3e-36, Method: Composition-based stats.
Identities = 49/222 (22%), Positives = 88/222 (39%), Gaps = 3/222 (1%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
++S +FM VK ++ L S L W + + + + R R + SL
Sbjct: 38 EMSPLGMFMAADWVVKGVMLSLLFASALVWVIFVARVLILRWERGALRRRYRALDRAGSL 97
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+ + + + +A E + + +GA GI++R + A +
Sbjct: 98 VAAREIFAKRKGV-MGQMVRAAERE-RATTGEGAALKPGIKERAGSEIARIEAGAARRMG 155
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCV 188
L + S VG+ G V G+M F SI+ + N+ + PGI E+L++ +GL
Sbjct: 156 HGAGVLAIVGSTAPFVGLFGTVWGIMNSFISISESNTTNLAIVAPGIAEALLATAIGLVA 215
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
+IP+ I YN + + + LSR + S
Sbjct: 216 AIPAVIFYNIMARGLGGYKVMLADAGALVERTLSRDLDLAAS 257
>gi|223938138|ref|ZP_03630035.1| MotA/TolQ/ExbB proton channel [bacterium Ellin514]
gi|223893182|gb|EEF59646.1| MotA/TolQ/ExbB proton channel [bacterium Ellin514]
Length = 244
Score = 156 bits (394), Expect = 3e-36, Method: Composition-based stats.
Identities = 50/211 (23%), Positives = 95/211 (45%), Gaps = 8/211 (3%)
Query: 17 FMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSL 76
+ + K II L IFSI++WS +I K++ +R F F + +++ +
Sbjct: 25 WQKATPEAKIIIIFLVIFSIVAWSTMISKALQMRRAKRLNTFFNSEFRNQKNVLGMYDRR 84
Query: 77 KNHHNIGLAAIFMSAMSEWKKSCDKG-------ARSPIGIQDRIDRMMDVAIARELEEIT 129
L A++ + E +G + I + + R ++ +A++ ++
Sbjct: 85 LEVEGCPLFAVYQAGSIELDTRLKRGVAGEGRKSNLSIKAVEHVKRSLENTVAQQSLKLE 144
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCV 188
L L S +G+LG V G+M F IA S ++ PG+ +LI+ + GL V
Sbjct: 145 SGLILLAIAVSGAPFLGLLGTVWGVMSTFGGIAREGSASLAAMAPGVSAALITTVAGLLV 204
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
+IPS YN + + + ++++ FA E +
Sbjct: 205 AIPSMFGYNWLVHNLRVLTVELDNFAQELIS 235
>gi|74316929|ref|YP_314669.1| MotA/TolQ/ExbB proton channel family protein [Thiobacillus
denitrificans ATCC 25259]
gi|74056424|gb|AAZ96864.1| MotA/TolQ/ExbB proton channel family [Thiobacillus denitrificans
ATCC 25259]
Length = 253
Score = 155 bits (393), Expect = 3e-36, Method: Composition-based stats.
Identities = 44/189 (23%), Positives = 89/189 (47%), Gaps = 5/189 (2%)
Query: 39 WSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLK-NHHNIGLAAIFMSAMSEWKK 97
W +I+ K++ R+ F + FW+ SL+ V +L+ + A + A+ +
Sbjct: 33 WYLIVTKALANYLAGRRADAFLKQFWASDSLQEVRAALRTQPRDNAFAELAHDALEAAED 92
Query: 98 SCDKGAR---SPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGM 154
G + + G+ + + R++ I +E L+ + S SA +G+ G V G+
Sbjct: 93 DHQHGVQKLAAAGGLGEFLTRLLRNGIDQEAMRAERGLTVMASAGSAAPYIGLFGTVWGI 152
Query: 155 MGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGF 213
+I + + G + E+LI LGL V+IP+ +AYN F ++ + +++ F
Sbjct: 153 YHALVNIGLAGQGTLDKVSGPVGEALIMTALGLAVAIPAVLAYNAFNRRNRVWLARLDAF 212
Query: 214 ANEFSAILS 222
A++ +L+
Sbjct: 213 AHDLYTVLT 221
>gi|319785629|ref|YP_004145104.1| MotA/TolQ/ExbB proton channel [Pseudoxanthomonas suwonensis 11-1]
gi|317464141|gb|ADV25873.1| MotA/TolQ/ExbB proton channel [Pseudoxanthomonas suwonensis 11-1]
Length = 254
Score = 155 bits (393), Expect = 3e-36, Method: Composition-based stats.
Identities = 41/210 (19%), Positives = 85/210 (40%), Gaps = 10/210 (4%)
Query: 23 AVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNI 82
++ L + S SW I ++ + L+ FW + + + ++
Sbjct: 39 VSWIVLLTLVLMSAASWYWTIFNTIKNMRLKSAADRVVNAFWEAPNAQEAIRIMEEQPRS 98
Query: 83 -GLAAIFMSAMS--------EWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLS 133
+ I + A E + G + + +DR + A+ RE + +
Sbjct: 99 EPFSKIALDAAQAAAHHQRAEAAATSGTGLGETLSRSEFVDRALRQAVTRESSRLQSGMV 158
Query: 134 FLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIPS 192
L ++ + VG+LG V G+ G I S ++ ++ G + E+LI +GL V+IP+
Sbjct: 159 LLATVGATAPFVGLLGTVWGIYGALIKIGATGSASIDAVAGPVGEALIMTAIGLFVAIPA 218
Query: 193 SIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
A+N F + + + + FA++ +
Sbjct: 219 VFAFNFFSKINSATIARFDSFAHDLHDFFA 248
>gi|260222013|emb|CBA31153.1| Biopolymer transport protein exbB [Curvibacter putative symbiont of
Hydra magnipapillata]
Length = 216
Score = 155 bits (393), Expect = 4e-36, Method: Composition-based stats.
Identities = 47/212 (22%), Positives = 80/212 (37%), Gaps = 4/212 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+++ L + + L SI +W VI KS FW +
Sbjct: 1 MNLLQLLFRGDAVHTAVALTLLCMSIAAWFVIFWKSWLLQRALTDVSRSTAAFWQAADVT 60
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
+L GL + A + + ++ R++ + L+ +
Sbjct: 61 AALAALPAFDREGLVLPLVQA---TQTQGTGTLAAAGDRGQQLTRVLRDGLHGVLQRLQS 117
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVS 189
L ++ S VG+LG V G+ SI G ++ I G + E+LI GL V+
Sbjct: 118 GQVLLATVGSTAPFVGLLGTVWGIYHALISITGGGQVSIDKISGPVGEALIMTAAGLAVA 177
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
IP+ +AYN F + +EGFA + +L
Sbjct: 178 IPAVLAYNVFGRLVARLEADLEGFALDLRELL 209
>gi|85375577|ref|YP_459639.1| biopolymer transport ExbB protein [Erythrobacter litoralis
HTCC2594]
gi|84788660|gb|ABC64842.1| biopolymer transport ExbB protein [Erythrobacter litoralis
HTCC2594]
Length = 263
Score = 155 bits (392), Expect = 5e-36, Method: Composition-based stats.
Identities = 46/215 (21%), Positives = 87/215 (40%), Gaps = 5/215 (2%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
+ Q G I +L I SI S+ ++I K + + +Q++ FW
Sbjct: 16 ATQFGFWEAMEQGGAIAWFIFGVLVIMSIGSFYILITKLLEQNKIMKQYKGVRTSFWKAP 75
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+L+ L N I AM D + + + +
Sbjct: 76 TLKDGATKL--DKNSAWRQIVDDAMK--ADEDHGKMADQREAHDYLHGSLQASEDSINAK 131
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGL 186
+ L FL S+ + +G+LG V+G+ +I S ++ + G + E+LI +GL
Sbjct: 132 LAGGLPFLASVGATAPFIGLLGTVIGIYRALINIGLAGSASIDKVAGPVGEALIMTAIGL 191
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
V++P+ +AYN +++ A + GF+ + A +
Sbjct: 192 LVAVPAVLAYNWLQSRNRRIAELLTGFSTDVLAYI 226
>gi|264680774|ref|YP_003280684.1| MotA/TolQ/ExbB proton channel [Comamonas testosteroni CNB-2]
gi|262211290|gb|ACY35388.1| MotA/TolQ/ExbB proton channel [Comamonas testosteroni CNB-2]
Length = 219
Score = 155 bits (392), Expect = 5e-36, Method: Composition-based stats.
Identities = 45/212 (21%), Positives = 88/212 (41%), Gaps = 1/212 (0%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
M ++ + L+ + S+LSW VI+ K RR+ + FW
Sbjct: 1 MSAGMWQWLAEGDAVTWATAALMLLMSVLSWVVILYKLWFVAVARRRVPQAVAAFWQMPD 60
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
L +K GL A+++ + R+ R + A+ + ++
Sbjct: 61 LVQAMAQVKALDRQGLVQAMADAVAQGGAAAQGSLAQSAAQGQRLLRSLREALGQASTQL 120
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLC 187
+ L ++ + VG+LG V G+ ++AG ++ + G + E+L+ GL
Sbjct: 121 QWGQTLLATIGATAPFVGLLGTVWGIHHALGTLAGSGQVDIAQLAGPVGEALVMTAAGLA 180
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
V++P+ +AYN + + +EGFA++ A
Sbjct: 181 VALPAVLAYNLLGRSASQLEAVLEGFAHDLHA 212
>gi|319764772|ref|YP_004128709.1| mota/tolq/exbb proton channel [Alicycliphilus denitrificans BC]
gi|330826988|ref|YP_004390291.1| MotA/TolQ/ExbB proton channel [Alicycliphilus denitrificans K601]
gi|317119333|gb|ADV01822.1| MotA/TolQ/ExbB proton channel [Alicycliphilus denitrificans BC]
gi|329312360|gb|AEB86775.1| MotA/TolQ/ExbB proton channel [Alicycliphilus denitrificans K601]
Length = 217
Score = 154 bits (391), Expect = 6e-36, Method: Composition-based stats.
Identities = 51/206 (24%), Positives = 84/206 (40%), Gaps = 2/206 (0%)
Query: 19 QMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKN 78
Q + + LL S+ SW VI+ K R FW SL + L
Sbjct: 9 QGDAVAQGLALLLLAMSVASWVVILWKLRLMWRARVDVPRSTAAFWQSPSLAAGLERLPP 68
Query: 79 HHNIGLAAIFMSAMSEWKKSCDKGARSPIG-IQDRIDRMMDVAIARELEEITEKLSFLGS 137
L + A ++ S A + G I R+ R + A+ L + L +
Sbjct: 69 CDREALVLPLVRAAAQVACSGSGAALADQGAIAQRLTRALRDALHGVLGRLQFGQVLLAT 128
Query: 138 MSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIPSSIAY 196
+ S VG+LG V G+ ++AG + + G + E+L+ GL V+IP+ +AY
Sbjct: 129 VGSTAPFVGLLGTVWGIHHALGALAGAEQITIERLAGPVGEALVMTAAGLSVAIPAVLAY 188
Query: 197 NKFIEDSKKFAMQMEGFANEFSAILS 222
N F + +EGFA + +++
Sbjct: 189 NWFGRAIGRIEADLEGFARDLRELVA 214
>gi|78189862|ref|YP_380200.1| ExbB/TolQ family protein [Chlorobium chlorochromatii CaD3]
gi|78172061|gb|ABB29157.1| Cell division and transport-associated protein TolQ [Chlorobium
chlorochromatii CaD3]
Length = 220
Score = 154 bits (391), Expect = 7e-36, Method: Composition-based stats.
Identities = 52/210 (24%), Positives = 96/210 (45%), Gaps = 3/210 (1%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
IFAL G V ++ L FS++SW++I K++ R + + F F+ E +
Sbjct: 9 IFALVADAGAVVLVVLFTLLAFSVVSWAIIAYKAIGLRAARYESKLFMDAFFDVAP-ERL 67
Query: 73 CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKL 132
+ LA ++ + + ++ D + Q + R + A E +++ +
Sbjct: 68 FAESERLSGAPLARVYRAGYIAF-RALDGKNVTFKQAQAVVARAIKRATNAETKQLASLV 126
Query: 133 SFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIP 191
FL ++ + +G+ G V G+M FQ+I S ++ PGI E+L++ +GL +IP
Sbjct: 127 PFLATVGNTAPFIGLFGTVWGIMTSFQAIGVTRSASLSAVAPGISEALVATAVGLAAAIP 186
Query: 192 SSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+ + YN + +E FA EF L
Sbjct: 187 AVMGYNYLTQQVGLLERDIEEFAPEFVTAL 216
>gi|296284897|ref|ZP_06862895.1| biopolymer transport ExbB protein [Citromicrobium bathyomarinum
JL354]
Length = 248
Score = 154 bits (390), Expect = 8e-36, Method: Composition-based stats.
Identities = 47/216 (21%), Positives = 95/216 (43%), Gaps = 7/216 (3%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
+ Q G I+ +L I S+ S+ ++I K + + Q+++ FW S
Sbjct: 16 TEFGFMEAMEQGGPIAWTILAVLVIMSVGSFYILITKLLEQNKVLGQYKKVRSQFWRANS 75
Query: 69 LETVCKSLKNHHN-IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
LE L + + ++A + K D + D + + + +
Sbjct: 76 LEEGAGKLDKNSAWRQMVDDTVAAQASHGKMTD-----SMEAHDWMHGSLARSQDAIMSR 130
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGL 186
+ L+FL ++ + VG+LG V+G+ +I S ++ + G + E+LI +GL
Sbjct: 131 LNGGLAFLATVGATAPFVGLLGTVIGIYRALINIGLAGSASIDKVAGPVGEALIMTAIGL 190
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
V++P+ AYN + +K+ A + GF+ + A ++
Sbjct: 191 LVAVPAVFAYNWLMSRNKRIAELLTGFSTDLLAYVN 226
>gi|2632265|emb|CAB08609.1| exbB [Xanthomonas campestris]
Length = 253
Score = 154 bits (390), Expect = 8e-36, Method: Composition-based stats.
Identities = 42/211 (19%), Positives = 85/211 (40%), Gaps = 8/211 (3%)
Query: 20 MGLAV-KCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKN 78
AV ++ L S SW + L+ FW + + ++++
Sbjct: 37 GDFAVSWVVLITLIAMSAASWYWTVINIFRATRLKSAADRVTTAFWDAPNAQDAIRAMEE 96
Query: 79 HHNI------GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKL 132
L A A + + G + + +DR + A+ RE ++ +
Sbjct: 97 QPASEPFSKIALDAAQARAHHQRAEGSTGGMGESLSRSEFVDRALRQAVTRESTKLQSGM 156
Query: 133 SFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIP 191
+ L ++ + VG+LG V G+ G I S ++ ++ G + E+LI +GL V+IP
Sbjct: 157 TLLATVGATAPFVGLLGTVWGIYGALIKIGATGSASIDAVAGPVGEALIMTAIGLFVAIP 216
Query: 192 SSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
+ A+N F + + + + FA++ +
Sbjct: 217 AVFAFNFFSKVNSSVIAKFDTFAHDLHDFFA 247
>gi|170739188|ref|YP_001767843.1| MotA/TolQ/ExbB proton channel [Methylobacterium sp. 4-46]
gi|168193462|gb|ACA15409.1| MotA/TolQ/ExbB proton channel [Methylobacterium sp. 4-46]
Length = 228
Score = 154 bits (390), Expect = 8e-36, Method: Composition-based stats.
Identities = 69/219 (31%), Positives = 104/219 (47%), Gaps = 11/219 (5%)
Query: 7 AIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG 66
A D S LF+Q VK ++ LL + S+ W+VI++K++ RRQ R F ++ +G
Sbjct: 9 AAHDFSFLGLFLQADPIVKGVMILLVLASVACWTVIVEKAIRLAAARRQARAFARMVATG 68
Query: 67 QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
LE G+AA ++A E + D + RI+R M A+A +L+
Sbjct: 69 GPLEAG---------RGIAARVVAAAQEAWRDQDPSETRAERRE-RIERAMRAALALDLK 118
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLG 185
+ L L + SA VG+ G V G+M F SIA ++ V PGI E+L + +G
Sbjct: 119 RLQVGLPLLATSGSAAPFVGLFGTVWGIMNSFASIAKSQDTSLAVVAPGIAEALFATAIG 178
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
L V+IP+ +AYNK D K L+R
Sbjct: 179 LVVAIPAVVAYNKLSGDLAKLQSTFAAAIGTLGNRLARD 217
>gi|213580960|ref|ZP_03362786.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Typhi str. E98-0664]
Length = 161
Score = 154 bits (390), Expect = 9e-36, Method: Composition-based stats.
Identities = 46/161 (28%), Positives = 80/161 (49%), Gaps = 2/161 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
++I LF++ L VK I+ +L FSI SW++IIQ++ R+ FE FWSG L
Sbjct: 1 MNILDLFLKASLLVKLIMLILIGFSIASWAIIIQRTRILNAAAREAEAFEDKFWSGIELS 60
Query: 71 TVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ + + + G IF S E+ + + +P + + R M +++ RELE +
Sbjct: 61 RLYQESQGRRDSLSGSEQIFYSGFKEFVRLHRANSHAPEAVVEGASRAMRISMNRELETL 120
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
+ FLG++ S +G+ G V G+M F ++ +
Sbjct: 121 ETHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATL 161
>gi|145298849|ref|YP_001141690.1| MotA/TolQ/ExbB proton channel family protein [Aeromonas salmonicida
subsp. salmonicida A449]
gi|142851621|gb|ABO89942.1| MotA/TolQ/ExbB proton channel family protein [Aeromonas salmonicida
subsp. salmonicida A449]
Length = 250
Score = 154 bits (389), Expect = 1e-35, Method: Composition-based stats.
Identities = 48/227 (21%), Positives = 100/227 (44%), Gaps = 7/227 (3%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
M+ +A + + L Q LL + S+ + + K V RR +F
Sbjct: 1 MDPE-IANNGMGVAHLLSQNTGVGLLPFILLVLMSLGTCYYTLLKIVLGQRERRLNAQFV 59
Query: 61 QLFWSGQSLETVCKSLK----NHHNIGLAAIFMSAMSEWKKSCDKGARSPIGI-QDRIDR 115
FW +S++ + + L + + ++ +++ ++ ++ +G + + R
Sbjct: 60 TRFWQHESVQDMERQLAHLTPQEAYGRVTSTALATVAQLNRAGERTVSLKLGSPDEFLLR 119
Query: 116 MMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG- 174
+ AI E + L+FL S+ SA +G+ G V G+ +I +++ + G
Sbjct: 120 ALRQAITHERVRLERGLAFLASVGSAAPFIGLFGTVWGIYHALLAIGAAGQSSLDKVAGP 179
Query: 175 IIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+ E+LI GL V++P+ + YN F+ ++ +E FA + A+L
Sbjct: 180 VGEALIMTGFGLAVALPAVLVYNFFVRRNRLKLAALEAFAYDLFALL 226
>gi|307130417|ref|YP_003882433.1| MotA/TolQ/ExbB proton channel family protein [Dickeya dadantii
3937]
gi|306527946|gb|ADM97876.1| MotA/TolQ/ExbB proton channel family protein [Dickeya dadantii
3937]
Length = 232
Score = 153 bits (388), Expect = 1e-35, Method: Composition-based stats.
Identities = 52/200 (26%), Positives = 103/200 (51%), Gaps = 4/200 (2%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLA 85
+I LL FS+++WS+ + K + RR+ ++F QLFW ++++ + + H LA
Sbjct: 14 GVILLLLFFSLVTWSIGLLKLAQYARQRRRNQQFRQLFWQQENIDAALRDVA--HPGALA 71
Query: 86 AIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLV 145
+ + ++ D+ +QDR++R + I RE + L+ L S+ + +
Sbjct: 72 NLARATQLTLERVKDR-ITPIAHLQDRVERALQQQIQRERRTLENGLALLASIGTTSPFI 130
Query: 146 GILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIPSSIAYNKFIEDSK 204
G+ G V G+M Q+I S ++ ++ G I +LI+ +G+ V++P+ + YN F+ K
Sbjct: 131 GLFGTVWGIMAALQTIGQSGSASLDTVAGPIGNALIATGIGIAVAVPAVLIYNYFLRRLK 190
Query: 205 KFAMQMEGFANEFSAILSRQ 224
M+ FA++ ++ Q
Sbjct: 191 LEVADMDDFAHDIYSVAQAQ 210
>gi|152980817|ref|YP_001354069.1| ExbB transport protein [Janthinobacterium sp. Marseille]
gi|151280894|gb|ABR89304.1| ExbB transport protein [Janthinobacterium sp. Marseille]
Length = 591
Score = 153 bits (388), Expect = 1e-35, Method: Composition-based stats.
Identities = 56/231 (24%), Positives = 99/231 (42%), Gaps = 12/231 (5%)
Query: 12 SIFALFMQMGLA-VKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFW--SGQS 68
S F + ++ LL + +LSW+++I K N+ + R F F +G
Sbjct: 354 SHFGFILAAMPLDAWLVVILLGVMMVLSWAIMISKGRNYGAISRANAIFMDHFRETAGAP 413
Query: 69 LETVCKSLK----NHHNIGLAAIFMSAMSEWKKSCDKG---ARSPIGIQDRIDRMMDVAI 121
L+ + S K + L ++ A+ E ++ D+G I MD +
Sbjct: 414 LDQLANSSKLPQDVKADSSLWRLYKVAVDEMRRRHDRGYDLNAVSNATISAIRAAMDGVM 473
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLI 180
RE E ++ ++++L + VG+ G V+G+M F A + ++ PG+ +L+
Sbjct: 474 VRENERMSHRMNWLSTAIEGAPYVGLFGTVIGIMLVFVVAAMAGAVDINSVAPGMAAALL 533
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS-RQTEGNIS 230
GL V+IP+ YN S M F +EF+ L+ Q EG +
Sbjct: 534 CTAAGLGVAIPALFGYNWLASRSDAIGADMAVFVDEFATRLAEEQGEGRQA 584
>gi|299529347|ref|ZP_07042785.1| MotA/TolQ/ExbB proton channel [Comamonas testosteroni S44]
gi|298722596|gb|EFI63515.1| MotA/TolQ/ExbB proton channel [Comamonas testosteroni S44]
Length = 215
Score = 153 bits (388), Expect = 2e-35, Method: Composition-based stats.
Identities = 44/208 (21%), Positives = 87/208 (41%), Gaps = 1/208 (0%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
++ + L+ + S+LSW VI+ K RR+ + FW L
Sbjct: 1 MWQWLAEGDAVTWATAALMLLMSVLSWVVILYKLRFMAVARRRVPQAVAAFWQMPDLVQA 60
Query: 73 CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKL 132
+K GL A+++ + R+ R + A+ + ++
Sbjct: 61 MAQVKALDRQGLVQAMADAVAQGGAAAQGSLAQSAAQGQRLLRSLREALGQASTQLQWGQ 120
Query: 133 SFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIP 191
+ L ++ + VG+LG V G+ ++AG ++ + G + E+L+ GL V++P
Sbjct: 121 TLLATIGATAPFVGLLGTVWGIHHALGTLAGSGQVDIAQLAGPVGEALVMTAAGLAVALP 180
Query: 192 SSIAYNKFIEDSKKFAMQMEGFANEFSA 219
+ +AYN + + +EGFA++ A
Sbjct: 181 AVLAYNLLGRSASQLEAVLEGFAHDLHA 208
>gi|108755183|emb|CAK32575.1| putative biopolymer transport protein [uncultured organism]
Length = 152
Score = 153 bits (387), Expect = 2e-35, Method: Composition-based stats.
Identities = 60/151 (39%), Positives = 95/151 (62%), Gaps = 5/151 (3%)
Query: 83 GLAAIFMSAMSEWKKSCDKGA----RSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSM 138
++A+F++AM EW++S KG + +Q+RI+R+M +A REL+ ++FL S
Sbjct: 1 PMSAVFVTAMQEWRRSLAKGLTQNESTRASLQERIERVMQIATVRELDRAERNMTFLAST 60
Query: 139 SSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCVSIPSSIAYN 197
+ +G+ G V G+M FQSIA + ++V + PGI E+L + LGL +IP+ +AYN
Sbjct: 61 GATAPFIGLFGTVWGIMNSFQSIALSKNTSLVVVAPGIAEALFATALGLLAAIPAVVAYN 120
Query: 198 KFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
K +D ++A +++ FA EFSAILSRQ E
Sbjct: 121 KLSKDLTRYADRLDSFAGEFSAILSRQMEEK 151
>gi|182415138|ref|YP_001820204.1| MotA/TolQ/ExbB proton channel [Opitutus terrae PB90-1]
gi|177842352|gb|ACB76604.1| MotA/TolQ/ExbB proton channel [Opitutus terrae PB90-1]
Length = 234
Score = 153 bits (387), Expect = 2e-35, Method: Composition-based stats.
Identities = 52/220 (23%), Positives = 106/220 (48%), Gaps = 5/220 (2%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLET 71
+I +F + G K I+ L + S+ +W+V++ K LR FE ++L
Sbjct: 15 NIIEIFERCGTVDKVIVLGLGLASLAAWTVMLGKHFELKRLRLLNYSFETHLRDQRTLLD 74
Query: 72 VCKSLKNHHNIGLAAIFMSAMSEWKK----SCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ +S +N I A +F A+ + + S ++G S + + + AIAR+
Sbjct: 75 LPESFRNKRVIPYADLFADAVESYWRAAAISKEQGQMSGRARLEHAENAIQRAIARQTLR 134
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
+ FL S+ S +G+LG V G+M F ++A + + PG+ ++++ + GL
Sbjct: 135 YESSMIFLASIVSGAPFIGLLGTVWGVMEAFAAVATQQTAGIQQLAPGVSGAMLATIAGL 194
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
V+IPS YN + +++ ++E +A+ + + +++
Sbjct: 195 VVAIPSVFGYNLLLGNTRAMVTELENYASSLADRIELESK 234
>gi|307944542|ref|ZP_07659882.1| protein TolQ [Roseibium sp. TrichSKD4]
gi|307772291|gb|EFO31512.1| protein TolQ [Roseibium sp. TrichSKD4]
Length = 139
Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats.
Identities = 67/139 (48%), Positives = 89/139 (64%), Gaps = 1/139 (0%)
Query: 92 MSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAV 151
M EWK+S + + +Q RIDR+MDV I RE E + +L L S+ SAG +G+ G V
Sbjct: 1 MREWKRSHEGARPAIASLQQRIDRVMDVTIQREAERLESRLLILASVGSAGPFIGLFGTV 60
Query: 152 LGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQM 210
G+M FQ+IA S N+ V PGI E+L + LGL +IP+ IAYNKF D K +M
Sbjct: 61 WGIMTAFQAIANAESTNLAVVAPGIAEALFATALGLLAAIPAVIAYNKFSSDVGKVVGRM 120
Query: 211 EGFANEFSAILSRQTEGNI 229
EGFA+EFSAILSRQ + ++
Sbjct: 121 EGFADEFSAILSRQIDQSV 139
>gi|86156696|ref|YP_463481.1| MotA/TolQ/ExbB proton channel [Anaeromyxobacter dehalogenans 2CP-C]
gi|85773207|gb|ABC80044.1| outer membrane transport energization protein ExbB
[Anaeromyxobacter dehalogenans 2CP-C]
Length = 252
Score = 152 bits (385), Expect = 3e-35, Method: Composition-based stats.
Identities = 45/228 (19%), Positives = 93/228 (40%), Gaps = 10/228 (4%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS---GQ 67
+ ++ MG K I +L + SI S V+ ++ V F ++ R+F
Sbjct: 23 FDLLHMWKTMGPFAKFIAGVLAVMSIYSLGVMAERLVTFARAQKASRQFAAALRDLLPAA 82
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWK------KSCDKGARSPIGIQDRIDRMMDVAI 121
+ + L + A+ E+ ++ + ++R ++ +
Sbjct: 83 KFGEAVELSRKLKRGHLPKVLGLAIEEYSHGVEALRTHGPRDVGQFDVIAAVNRAVERSS 142
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLI 180
R + ++ L L ++ S VG+LG V G++ FQ++A S + S+ GI E+L+
Sbjct: 143 LRTVNDLRRGLGALATVGSTAPFVGLLGTVAGIITAFQAMAATGSGGLGSVSAGIAEALV 202
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
+ GL V+IP+ + +N + + + A E ++ G
Sbjct: 203 TTAFGLLVAIPAVMMFNYLTNRVEDMQVDITDSATELMDFFMKEGRGE 250
>gi|21240783|ref|NP_640365.1| biopolymer transport ExbB protein [Xanthomonas axonopodis pv. citri
str. 306]
gi|78045565|ref|YP_361740.1| biopolymer transport ExbB protein [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|289662275|ref|ZP_06483856.1| biopolymer transport ExbB protein [Xanthomonas campestris pv.
vasculorum NCPPB702]
gi|289667641|ref|ZP_06488716.1| biopolymer transport ExbB protein [Xanthomonas campestris pv.
musacearum NCPPB4381]
gi|294627430|ref|ZP_06706014.1| biopolymer transport ExbB protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|325915693|ref|ZP_08177998.1| outer membrane transport energization protein ExbB (TC 2.C.1.1.1)
[Xanthomonas vesicatoria ATCC 35937]
gi|325926211|ref|ZP_08187569.1| outer membrane transport energization protein ExbB (TC 2.C.1.1.1)
[Xanthomonas perforans 91-118]
gi|21106048|gb|AAM34901.1| biopolymer transport ExbB protein [Xanthomonas axonopodis pv. citri
str. 306]
gi|78033995|emb|CAJ21640.1| biopolymer transport ExbB protein [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|292598251|gb|EFF42404.1| biopolymer transport ExbB protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|325538110|gb|EGD09801.1| outer membrane transport energization protein ExbB (TC 2.C.1.1.1)
[Xanthomonas vesicatoria ATCC 35937]
gi|325543393|gb|EGD14818.1| outer membrane transport energization protein ExbB (TC 2.C.1.1.1)
[Xanthomonas perforans 91-118]
Length = 253
Score = 152 bits (384), Expect = 4e-35, Method: Composition-based stats.
Identities = 42/211 (19%), Positives = 86/211 (40%), Gaps = 8/211 (3%)
Query: 20 MGLAV-KCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKN 78
AV ++ L S SW + L+ FW + + ++++
Sbjct: 37 GDFAVSWVVLITLIAMSAASWYWTVINIFRATRLKSAADRVTTAFWDAPNAQDAIRAMEE 96
Query: 79 HHNI------GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKL 132
L A +A + + G + + +DR + A+ RE ++ +
Sbjct: 97 QPASEPFSKIALDAAQAAAHHQRAEGSTGGLGESLSRSEFVDRALRQAVTRESTKLQSGM 156
Query: 133 SFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIP 191
+ L ++ + VG+LG V G+ G I S ++ ++ G + E+LI +GL V+IP
Sbjct: 157 TLLATVGATAPFVGLLGTVWGIYGALIKIGATGSASIDAVAGPVGEALIMTAIGLFVAIP 216
Query: 192 SSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
+ A+N F + + + + FA++ +
Sbjct: 217 AVFAFNFFSKVNSSVIAKFDTFAHDLHDFFA 247
>gi|30248370|ref|NP_840440.1| MotA/TolQ/ExbB proton channel family protein [Nitrosomonas europaea
ATCC 19718]
gi|30138256|emb|CAD84264.1| MotA/TolQ/ExbB proton channel family [Nitrosomonas europaea ATCC
19718]
Length = 266
Score = 151 bits (382), Expect = 6e-35, Method: Composition-based stats.
Identities = 46/189 (24%), Positives = 90/189 (47%), Gaps = 5/189 (2%)
Query: 39 WSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSL----KNHHNIGLAAIFMSAMSE 94
W +I+ KS++ R+ F + FW+ ++ + + NH I LA + ++
Sbjct: 34 WYLIVTKSISNTIASRRANAFLKHFWNIDTIPQLETEIRTMTGNHAFIQLAKTALGVTTD 93
Query: 95 WKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGM 154
+K + + GI + + R + ++ +E I L+ + S SA +G+ G V G+
Sbjct: 94 SQKHGLEKLAAAGGINELLTRSLRNSLDQEAARIENGLTIIASAGSAAPYIGLFGTVWGI 153
Query: 155 MGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGF 213
I + + G + E+LI LGL V+IP+ +A+N F ++ + Q++ F
Sbjct: 154 YHALIQIGLSGQGTLDKVAGPVGEALIMTALGLAVAIPAVLAFNAFTRRNRLWMAQLDSF 213
Query: 214 ANEFSAILS 222
A++ IL+
Sbjct: 214 AHDLYTILT 222
>gi|21229487|ref|NP_635404.1| biopolymer transport ExbB protein [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66766361|ref|YP_241123.1| biopolymer transport ExbB protein [Xanthomonas campestris pv.
campestris str. 8004]
gi|188989405|ref|YP_001901415.1| macromolecule import protein [Xanthomonas campestris pv. campestris
str. B100]
gi|190359307|sp|B0RLE6|EXBB_XANCB RecName: Full=Biopolymer transport protein exbB
gi|190359308|sp|P0C7L9|EXBB_XANCP RecName: Full=Biopolymer transport protein exbB
gi|22023958|gb|AAM89267.1|AF527951_4 ExbB [Xanthomonas campestris pv. campestris]
gi|21110948|gb|AAM39328.1| biopolymer transport ExbB protein [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66571693|gb|AAY47103.1| biopolymer transport ExbB protein [Xanthomonas campestris pv.
campestris str. 8004]
gi|167731165|emb|CAP49337.1| macromolecule import protein [Xanthomonas campestris pv.
campestris]
Length = 253
Score = 151 bits (382), Expect = 6e-35, Method: Composition-based stats.
Identities = 42/211 (19%), Positives = 86/211 (40%), Gaps = 8/211 (3%)
Query: 20 MGLAV-KCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKN 78
AV ++ L S SW + L+ FW + + ++++
Sbjct: 37 GDFAVSWVVLITLIAMSAASWYWTVINIFRATRLKSAADRVTTAFWDAPNAQDAIRAMEE 96
Query: 79 HHNI------GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKL 132
L A +A + + G + + +DR + A+ RE ++ +
Sbjct: 97 QPASEPFSKIALDAAQAAAHHQRAEGSTGGMGESLSRSEFVDRALRQAVTRESTKLQSGM 156
Query: 133 SFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIP 191
+ L ++ + VG+LG V G+ G I S ++ ++ G + E+LI +GL V+IP
Sbjct: 157 TLLATVGATAPFVGLLGTVWGIYGALIKIGATGSASIDAVAGPVGEALIMTAIGLFVAIP 216
Query: 192 SSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
+ A+N F + + + + FA++ +
Sbjct: 217 AVFAFNFFSKVNSSVIAKFDTFAHDLHDFFA 247
>gi|254524713|ref|ZP_05136768.1| transport protein ExbB2 [Stenotrophomonas sp. SKA14]
gi|219722304|gb|EED40829.1| transport protein ExbB2 [Stenotrophomonas sp. SKA14]
Length = 594
Score = 151 bits (382), Expect = 7e-35, Method: Composition-based stats.
Identities = 55/230 (23%), Positives = 101/230 (43%), Gaps = 13/230 (5%)
Query: 12 SIFALFMQM-GLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLF--WSGQS 68
S F ++ ++ +L + +LSW+++I KS +F + F + F SG
Sbjct: 358 SHFGFILKAMPFDAWVVVAILGLMMLLSWAIMIAKSRHFGRTSKANAVFTESFGKLSGVP 417
Query: 69 LETVC------KSLKNHHNIGLAAIFMSAMSEWKKSCDKGARS---PIGIQDRIDRMMDV 119
L T+ K+ H+ L I+ A+ E ++ + S I MD
Sbjct: 418 LRTLSDMDRQGKAPTAMHDGSLWRIYQVAIDEMQQRHQRDGNSGYLSAATIAAIRASMDA 477
Query: 120 AIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIES 178
+ RE E + ++++L + VG+ G V+G+M F A + ++ PG+ +
Sbjct: 478 VMVREQEGMARRMNWLSTTIEGAPYVGLFGTVIGIMLVFVVAAMAGAVDINSVAPGMAAA 537
Query: 179 LISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
L+ GL V+IP+ YN ++ M F +EF+A L+ + +G
Sbjct: 538 LLCTAAGLGVAIPALFGYNYLGARAEAIGADMAVFIDEFAARLAEEQDGR 587
>gi|294665508|ref|ZP_06730791.1| biopolymer transport ExbB protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
gi|292604711|gb|EFF48079.1| biopolymer transport ExbB protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
Length = 253
Score = 151 bits (382), Expect = 8e-35, Method: Composition-based stats.
Identities = 42/211 (19%), Positives = 85/211 (40%), Gaps = 8/211 (3%)
Query: 20 MGLAV-KCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKN 78
AV ++ L S SW + L+ FW + ++++
Sbjct: 37 GDFAVSWVVLITLIAMSAASWYWTVINIFRATRLKSAADRVTTAFWDAPHAQDAIRAMEE 96
Query: 79 HHNI------GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKL 132
L A +A + + G + + +DR + A+ RE ++ +
Sbjct: 97 QPASEPFSKIALDAAQAAAHHQRAEGSTGGLGESLSRSEFVDRALRQAVTRESTKLQSGM 156
Query: 133 SFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIP 191
+ L ++ + VG+LG V G+ G I S ++ ++ G + E+LI +GL V+IP
Sbjct: 157 TLLATVGATAPFVGLLGTVWGIYGALIKIGATGSASIDAVAGPVGEALIMTAIGLFVAIP 216
Query: 192 SSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
+ A+N F + + + + FA++ +
Sbjct: 217 AVFAFNFFSKVNSSVIAKFDTFAHDLHDFFA 247
>gi|220934041|ref|YP_002512940.1| MotA/TolQ/ExbB proton channel [Thioalkalivibrio sp. HL-EbGR7]
gi|219995351|gb|ACL71953.1| MotA/TolQ/ExbB proton channel [Thioalkalivibrio sp. HL-EbGR7]
Length = 240
Score = 151 bits (382), Expect = 8e-35, Method: Composition-based stats.
Identities = 50/216 (23%), Positives = 97/216 (44%), Gaps = 5/216 (2%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+ I +F Q + + +L + S+ +W++I ++V + +RR R F+Q FW +
Sbjct: 1 MDIGLVFEQGDWVLIGVFLILLLMSVATWALIFGRTVTALRIRRDNRAFQQAFWDARGDA 60
Query: 71 TVCKSLKNHHNIGLAAIFMSA---MSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ LAAI + + ++ + + + R + A+ RE
Sbjct: 61 QALARAEQ-SGSPLAAIARAGIRGLKHYRSRDPQRLGDACSSDEFLVRTIRNALGREQAR 119
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGI-IESLISILLGL 186
L+ L S+ S VG+ G V G+ IA + ++ + G E+L++ GL
Sbjct: 120 QQSGLTVLASVGSTAPFVGLFGTVWGIYHALMDIAAAGNASMEVVAGPLGEALVATAAGL 179
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
+IP+ +AYN ++ A +M+ FA++ A L+
Sbjct: 180 AAAIPAVLAYNASHRFNRSLAQEMDAFAHDLHAYLT 215
>gi|166709904|ref|ZP_02241111.1| biopolymer transport ExbB protein [Xanthomonas oryzae pv. oryzicola
BLS256]
Length = 253
Score = 151 bits (381), Expect = 8e-35, Method: Composition-based stats.
Identities = 42/211 (19%), Positives = 86/211 (40%), Gaps = 8/211 (3%)
Query: 20 MGLAV-KCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKN 78
AV ++ L S SW + L+ FW + + ++++
Sbjct: 37 GDFAVSWVVLITLISMSAASWYWTVINIFRATRLKSAADRVTTAFWDAPNAQDAIRAMEE 96
Query: 79 HHNI------GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKL 132
L A +A + + G + + +DR + A+ RE ++ +
Sbjct: 97 QPASEPFSKIALDAAQAAAHHQRAEGSTGGLGESLSRSEFVDRALRQAVTRESTKLQSGM 156
Query: 133 SFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIP 191
+ L ++ + VG+LG V G+ G I S ++ ++ G + E+LI +GL V+IP
Sbjct: 157 TLLATVGATSPFVGLLGTVWGIYGALIKIGATGSASIDAVAGPVGEALIMTAIGLFVAIP 216
Query: 192 SSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
+ A+N F + + + + FA++ +
Sbjct: 217 AVFAFNFFSKVNSSVIAKFDTFAHDLHDFFA 247
>gi|189346275|ref|YP_001942804.1| protein TolQ [Chlorobium limicola DSM 245]
gi|189340422|gb|ACD89825.1| protein TolQ [Chlorobium limicola DSM 245]
Length = 225
Score = 151 bits (381), Expect = 8e-35, Method: Composition-based stats.
Identities = 53/217 (24%), Positives = 105/217 (48%), Gaps = 3/217 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+F+L G V ++ LL FS++SW++I K + R + EF F+ +L+
Sbjct: 6 FGLFSLVSDAGPVVLLVLALLVGFSVISWTIIAYKFTSVRKSRHESSEFLDCFFEVSNLD 65
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
V + + N LA +F S E++ ++RI R + + E + ++
Sbjct: 66 RVFAESEKYRNGSLARVFRSGYLEYR--APGKPEENRNKEERIKRAIKREVNAETKRLSH 123
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCVS 189
+ FL ++ + +G+ G V G+M F +I S ++ ++ PGI E+L++ GL +
Sbjct: 124 LVPFLATVGNTAPFIGLFGTVWGIMNAFHNIGLTQSASLAAVAPGISEALVATAAGLAAA 183
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
IP+ + YN + ++ F+++F+A +T+
Sbjct: 184 IPAVMGYNYLTQQIGGIERDLDDFSSDFAAACLEKTD 220
>gi|194365976|ref|YP_002028586.1| MotA/TolQ/ExbB proton channel [Stenotrophomonas maltophilia R551-3]
gi|194348780|gb|ACF51903.1| MotA/TolQ/ExbB proton channel [Stenotrophomonas maltophilia R551-3]
Length = 594
Score = 151 bits (381), Expect = 9e-35, Method: Composition-based stats.
Identities = 54/230 (23%), Positives = 101/230 (43%), Gaps = 13/230 (5%)
Query: 12 SIFALFMQM-GLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLF--WSGQS 68
S F ++ ++ +L + ++SW+++I KS +F + F + F SG
Sbjct: 358 SHFGFILKAMPFDAWVVVAILGLMMLMSWAIMIAKSRHFGRTSKANAVFTESFGKLSGVP 417
Query: 69 LETVC------KSLKNHHNIGLAAIFMSAMSEWKKSCDKGARS---PIGIQDRIDRMMDV 119
L T+ K+ H+ L I+ A+ E ++ + S I MD
Sbjct: 418 LRTLSEMDRQGKAPTAMHDGSLWRIYQVAIDEMQQRHQRDGNSGYLSGATIAAIRASMDA 477
Query: 120 AIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIES 178
+ RE E + ++++L + VG+ G V+G+M F A + ++ PG+ +
Sbjct: 478 VMVREQEAMARRMNWLSTTIEGAPYVGLFGTVIGIMLVFVVAAMAGAVDINSVAPGMAAA 537
Query: 179 LISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
L+ GL V+IP+ YN ++ M F +EF+A L+ + +G
Sbjct: 538 LLCTAAGLGVAIPALFGYNYLGARAEAIGADMAVFIDEFAARLAEEQDGR 587
>gi|325922767|ref|ZP_08184501.1| outer membrane transport energization protein ExbB (TC 2.C.1.1.1)
[Xanthomonas gardneri ATCC 19865]
gi|325922955|ref|ZP_08184667.1| outer membrane transport energization protein ExbB (TC 2.C.1.1.1)
[Xanthomonas gardneri ATCC 19865]
gi|325546563|gb|EGD17705.1| outer membrane transport energization protein ExbB (TC 2.C.1.1.1)
[Xanthomonas gardneri ATCC 19865]
gi|325546763|gb|EGD17883.1| outer membrane transport energization protein ExbB (TC 2.C.1.1.1)
[Xanthomonas gardneri ATCC 19865]
Length = 254
Score = 151 bits (381), Expect = 9e-35, Method: Composition-based stats.
Identities = 42/212 (19%), Positives = 84/212 (39%), Gaps = 9/212 (4%)
Query: 20 MGLAV-KCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKN 78
AV ++ L S SW + L+ FW + + ++++
Sbjct: 37 GDFAVSWVVLITLIAMSAASWYWTVINIFRATRLKSAADRVTTAFWDAPNAQDAIRAMEE 96
Query: 79 HHNI-GLAAIFMSAMSEWKKSCDKGARSPIGI------QDRIDRMMDVAIARELEEITEK 131
+ I + A S G+ + +DR + A+ RE +
Sbjct: 97 QPASEPFSKIALDAAQAAAHHQRAEGTSAGGLGESLSRSEFVDRALRQAVTRESTRLQSG 156
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSI 190
++ L ++ + VG+LG V G+ G I S ++ ++ G + E+LI +GL V+I
Sbjct: 157 MTLLATVGATAPFVGLLGTVWGIYGALIKIGATGSASIDAVAGPVGEALIMTAIGLFVAI 216
Query: 191 PSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
P+ A+N F + + + + FA++ +
Sbjct: 217 PAVFAFNFFSKVNSSVIAKFDTFAHDLHDFFA 248
>gi|71275526|ref|ZP_00651812.1| MotA/TolQ/ExbB proton channel [Xylella fastidiosa Dixon]
gi|71900173|ref|ZP_00682313.1| MotA/TolQ/ExbB proton channel [Xylella fastidiosa Ann-1]
gi|170729260|ref|YP_001774693.1| biopolymer transport ExbB protein [Xylella fastidiosa M12]
gi|71163826|gb|EAO13542.1| MotA/TolQ/ExbB proton channel [Xylella fastidiosa Dixon]
gi|71730062|gb|EAO32153.1| MotA/TolQ/ExbB proton channel [Xylella fastidiosa Ann-1]
gi|167964053|gb|ACA11063.1| biopolymer transport ExbB protein [Xylella fastidiosa M12]
Length = 254
Score = 151 bits (381), Expect = 9e-35, Method: Composition-based stats.
Identities = 44/230 (19%), Positives = 97/230 (42%), Gaps = 14/230 (6%)
Query: 7 AIMDISIFALF--MQMGL----AVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
A+ + ++ L M ++ +L S LSW + + + L+
Sbjct: 19 ALSKMGVWHLIGEMTASPAEFAVSWAVLIILVTMSSLSWYWTVINILRALRLKGAGYLVI 78
Query: 61 QLFWSGQSLETVCKSL-KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDR------I 113
FW ++ + ++ K + + I + A + +G+ +R +
Sbjct: 79 NAFWKAKTPQEAISAMEKQSASEPFSKIALDASQAAAHHQRTEGGNAMGLGERLSLSEFV 138
Query: 114 DRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP 173
DR + A+ RE ++ ++ L ++ + VG+LG V G+ +I S ++ ++
Sbjct: 139 DRALRQAVTRESSKLQSGMTLLATVGATAPFVGLLGTVWGIYNALITIGATGSASIDAVA 198
Query: 174 G-IIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
G + E+LI +GL V+IP+ A+N F + + + + FA++ +
Sbjct: 199 GPVGEALIMTAIGLFVAIPAVFAFNFFSKINSSIIAKFDTFAHDLHDFFA 248
>gi|160901437|ref|YP_001567019.1| MotA/TolQ/ExbB proton channel [Delftia acidovorans SPH-1]
gi|160367021|gb|ABX38634.1| MotA/TolQ/ExbB proton channel [Delftia acidovorans SPH-1]
Length = 244
Score = 151 bits (381), Expect = 1e-34, Method: Composition-based stats.
Identities = 49/221 (22%), Positives = 90/221 (40%), Gaps = 4/221 (1%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
++ + Q + LL S+ SW VI+ K RR+ + FWS L T
Sbjct: 5 LWLWWQQGDAVARGTALLLLALSVASWVVIVWKIWFMAASRRRVPQAIAAFWSAPDLATG 64
Query: 73 CKSLKNHHNIGLAAIFMSAMSEWKK---SCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+ L A A+S+ S R+ R + A+ ++
Sbjct: 65 QARMAEGDRQQLVAPMAGAVSQALAPTGSSGMALSGRAARSVRLTRGLRQALQSASHQLQ 124
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCV 188
+ L ++ + VG+LG V G+ ++AG + + G + E+L+ GL V
Sbjct: 125 WGQTLLATVGATAPFVGLLGTVWGIHHALATLAGSGQIGIEQLAGPVGEALVMTAAGLAV 184
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNI 229
++P+ +AYN + + +EGFA++ A+ + G +
Sbjct: 185 ALPAVLAYNLLGRAAAQMEALLEGFAHDLQAMFGLEQPGQV 225
>gi|238021536|ref|ZP_04601962.1| hypothetical protein GCWU000324_01436 [Kingella oralis ATCC 51147]
gi|237868516|gb|EEP69522.1| hypothetical protein GCWU000324_01436 [Kingella oralis ATCC 51147]
Length = 219
Score = 151 bits (381), Expect = 1e-34, Method: Composition-based stats.
Identities = 48/219 (21%), Positives = 99/219 (45%), Gaps = 3/219 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+++ +F + + L SI +W +I+ + V + RR R + W+ + L
Sbjct: 1 MNLGLVFKSGDAVLIGVFLCLIAMSITTWVLILLRGVRYRAARRANRVAAEAIWAAKDLA 60
Query: 71 TVCKSLKN--HHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ K LA + A ++ + + + ++R M +I + L
Sbjct: 61 QAEQQAKQIDAPISDLALDAIRANQQFHATQSSMLSASLPRNAYLEREMRHSIGKILSRF 120
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLC 187
+ L ++ S VG+LG V G+ +I+ ++ ++ G I E+L++ +GL
Sbjct: 121 EGGMMALATIGSTAPFVGLLGTVWGIYHALINISNSGQMSIAAVAGPIGEALVATAVGLF 180
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ +AYN F+ +K + ++ GFA++F L + E
Sbjct: 181 AAIPAVLAYNVFMRGNKNLSRELHGFAHDFHVQLINEKE 219
>gi|197120699|ref|YP_002132650.1| MotA/TolQ/ExbB proton channel [Anaeromyxobacter sp. K]
gi|220915411|ref|YP_002490715.1| MotA/TolQ/ExbB proton channel [Anaeromyxobacter dehalogenans 2CP-1]
gi|196170548|gb|ACG71521.1| MotA/TolQ/ExbB proton channel [Anaeromyxobacter sp. K]
gi|219953265|gb|ACL63649.1| MotA/TolQ/ExbB proton channel [Anaeromyxobacter dehalogenans 2CP-1]
Length = 252
Score = 150 bits (380), Expect = 1e-34, Method: Composition-based stats.
Identities = 45/229 (19%), Positives = 93/229 (40%), Gaps = 10/229 (4%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS---GQ 67
+ ++ MG K I +L + SI S V+ ++ V F ++ R+F
Sbjct: 23 FDLLHMWKTMGPFAKFIAGVLAVMSIYSLGVMAERLVTFARAQKASRQFAAALRDLLPAA 82
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWK------KSCDKGARSPIGIQDRIDRMMDVAI 121
+ + L + A+ E+ K+ + ++R ++ +
Sbjct: 83 KFGEAVELSRKLKRGHLPKVLGLAIEEYSHGVEALKTHGPRDVGNFDVIAAVNRAVERSS 142
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLI 180
R + ++ L L ++ S VG+LG V G++ FQ++A S + S+ GI E+L+
Sbjct: 143 LRTVNDLRRGLGALATVGSTAPFVGLLGTVAGIITAFQAMAATGSGGLGSVSAGIAEALV 202
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNI 229
+ GL V+IP+ + +N + + + A E ++ +
Sbjct: 203 TTAFGLLVAIPAVMMFNYLTNRVEDMQVDITDSATELMDFFMKEGRSEV 251
>gi|285016830|ref|YP_003374541.1| biopolymer transport protein [Xanthomonas albilineans GPE PC73]
gi|283472048|emb|CBA14555.1| probable biopolymer transport protein [Xanthomonas albilineans]
Length = 253
Score = 150 bits (380), Expect = 1e-34, Method: Composition-based stats.
Identities = 44/211 (20%), Positives = 88/211 (41%), Gaps = 8/211 (3%)
Query: 20 MGLAV-KCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKN 78
AV ++ L S SW + L+ Q LFW + + ++++
Sbjct: 37 GDFAVSWVVLVTLITMSASSWYWTVINIFRATRLKSQADRVTSLFWDTPNAQDAIRAMEE 96
Query: 79 HHNI------GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKL 132
L A +A + + G + + +DR + A+ RE ++ +
Sbjct: 97 QPASEPFSKIALDAAQAAAHHQRSEGTGAGLGETLSRSEFVDRALRQAVTRESTKLQSGM 156
Query: 133 SFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIP 191
+ L ++ + VG+LG V G+ G I S ++ ++ G + E+LI +GL V+IP
Sbjct: 157 TLLATVGACAPFVGLLGTVWGIYGALIKIGATGSASIDAVAGPVGEALIMTAIGLFVAIP 216
Query: 192 SSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
+ A+N F + + + + FA++ +
Sbjct: 217 AVFAFNFFSKVNSSVIAKFDTFAHDLHDFFA 247
>gi|58579632|ref|YP_198648.1| biopolymer transport ExbB protein [Xanthomonas oryzae pv. oryzae
KACC10331]
gi|84621666|ref|YP_449038.1| biopolymer transport ExbB protein [Xanthomonas oryzae pv. oryzae
MAFF 311018]
gi|188574279|ref|YP_001911208.1| biopolymer transport ExbB protein [Xanthomonas oryzae pv. oryzae
PXO99A]
gi|58424226|gb|AAW73263.1| biopolymer transport ExbB protein [Xanthomonas oryzae pv. oryzae
KACC10331]
gi|84365606|dbj|BAE66764.1| biopolymer transport ExbB protein [Xanthomonas oryzae pv. oryzae
MAFF 311018]
gi|188518731|gb|ACD56676.1| biopolymer transport ExbB protein [Xanthomonas oryzae pv. oryzae
PXO99A]
Length = 253
Score = 150 bits (380), Expect = 1e-34, Method: Composition-based stats.
Identities = 42/211 (19%), Positives = 86/211 (40%), Gaps = 8/211 (3%)
Query: 20 MGLAV-KCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKN 78
AV ++ L S SW + L+ FW + + ++++
Sbjct: 37 GDFAVSWVVLITLISMSAASWYWTVINIFRATRLKGAADRVTTAFWDAPNAQDAIRAMEE 96
Query: 79 HHNI------GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKL 132
L A +A + + G + + +DR + A+ RE ++ +
Sbjct: 97 QPASEPFSKIALDAAQAAAHHQRAEGSTGGLGESLSRSEFVDRALRQAVTRESTKLQSGM 156
Query: 133 SFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIP 191
+ L ++ + VG+LG V G+ G I S ++ ++ G + E+LI +GL V+IP
Sbjct: 157 TLLATVGATAPFVGLLGTVWGIYGALIKIGATGSASIDAVAGPVGEALIMTAIGLFVAIP 216
Query: 192 SSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
+ A+N F + + + + FA++ +
Sbjct: 217 AVFAFNFFSKVNSSVIAKFDTFAHDLHDFFA 247
>gi|85709675|ref|ZP_01040740.1| biopolymer transport ExbB protein [Erythrobacter sp. NAP1]
gi|85688385|gb|EAQ28389.1| biopolymer transport ExbB protein [Erythrobacter sp. NAP1]
Length = 265
Score = 150 bits (380), Expect = 1e-34, Method: Composition-based stats.
Identities = 45/214 (21%), Positives = 93/214 (43%), Gaps = 7/214 (3%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
+ + + G I+ ++ I S+ S+ ++ K + RQ++ Q FW SL
Sbjct: 19 EFGFWKAMEEGGPVAWSILAVMIIMSVGSFYILFTKLFEQNKVMRQYQSVRQSFWRASSL 78
Query: 70 ETVCKSLKNHHN-IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ L+ + LA ++A K G ++ + + + +
Sbjct: 79 KEGATKLEKNSAWRQLADDAVTAQEHHGKMEGAGQEVHF-----VEEELAHSQNTINQSL 133
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLC 187
+ LSFL S+ + +G+LG V+G+ +I S ++ + G + E+LI +GL
Sbjct: 134 SGGLSFLASVGATAPFIGLLGTVIGIYRALINIGIEGSASIDKVAGPVGEALIMTAIGLL 193
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
V++P+ +A+N +++ M F+N A +
Sbjct: 194 VAVPAVLAFNWLQSRNRRIDALMTDFSNSIVAYI 227
>gi|28197955|ref|NP_778269.1| biopolymer transport ExbB protein [Xylella fastidiosa Temecula1]
gi|71899727|ref|ZP_00681879.1| MotA/TolQ/ExbB proton channel [Xylella fastidiosa Ann-1]
gi|182680582|ref|YP_001828742.1| MotA/TolQ/ExbB proton channel [Xylella fastidiosa M23]
gi|28056015|gb|AAO27918.1| biopolymer transport ExbB protein [Xylella fastidiosa Temecula1]
gi|71730522|gb|EAO32601.1| MotA/TolQ/ExbB proton channel [Xylella fastidiosa Ann-1]
gi|182630692|gb|ACB91468.1| MotA/TolQ/ExbB proton channel [Xylella fastidiosa M23]
gi|307579034|gb|ADN63003.1| biopolymer transport ExbB protein [Xylella fastidiosa subsp.
fastidiosa GB514]
Length = 254
Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats.
Identities = 44/230 (19%), Positives = 97/230 (42%), Gaps = 14/230 (6%)
Query: 7 AIMDISIFALF--MQMGL----AVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
A+ + ++ L M ++ +L S LSW + + + L+
Sbjct: 19 ALSKMGVWHLIGEMTASPAEFAVSWAVLIILVTMSSLSWYWTVINILRALRLKGAGYLVI 78
Query: 61 QLFWSGQSLETVCKSL-KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDR------I 113
FW ++ + ++ K + + I + A + +G+ +R +
Sbjct: 79 NAFWKAKTPQEAISAMEKQSASEPFSKIALDASQAAAHHQRTEGGNAMGLGERLSLSEFV 138
Query: 114 DRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP 173
DR + A+ RE ++ ++ L ++ + VG+LG V G+ +I S ++ ++
Sbjct: 139 DRALRQAVTRESSKLQSGMTLLATVGATAPFVGLLGTVWGIYNALITIGATGSASIDAVA 198
Query: 174 G-IIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
G + E+LI +GL V+IP+ A+N F + + + + FA++ +
Sbjct: 199 GPVGEALIMTAIGLFVAIPAVFAFNFFSKINSSTIAKFDTFAHDLHDFFA 248
>gi|307246492|ref|ZP_07528564.1| Biopolymer transport ExbB protein [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|306852555|gb|EFM84788.1| Biopolymer transport ExbB protein [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
Length = 222
Score = 149 bits (378), Expect = 2e-34, Method: Composition-based stats.
Identities = 42/215 (19%), Positives = 96/215 (44%), Gaps = 5/215 (2%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+++ L Q + + +L SILSWS+I+ + + I +++ + S +++
Sbjct: 1 MNLTELIKQQDIVLSVSFFILVFMSILSWSIILIRLIKIIGVKKNNQVTFNRIKSDENMN 60
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSE---WKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
K + ++ I +A + ++ + + +D + + AI + L +
Sbjct: 61 QA-KKYTQNKRSDISEILQTAFKQCELYQLNGKYNLSHQLPFKDFLTLHLRNAITQSLRK 119
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
L L S+ + +G+ G V G+ I+ ++ ++ I E+L++ +GL
Sbjct: 120 YDGGLVALASIGAVAPFIGLFGTVWGIFNALMDISQQGQVSIATVSAPIGEALVATAMGL 179
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
V+IP+ +AYN ++ + ++ +ANE L
Sbjct: 180 FVAIPAVLAYNLIARLNRNLSQDLDHYANELFIYL 214
>gi|134293914|ref|YP_001117650.1| MotA/TolQ/ExbB proton channel [Burkholderia vietnamiensis G4]
gi|134137071|gb|ABO58185.1| outer membrane transport energization protein ExbB [Burkholderia
vietnamiensis G4]
Length = 601
Score = 149 bits (378), Expect = 2e-34, Method: Composition-based stats.
Identities = 56/225 (24%), Positives = 103/225 (45%), Gaps = 12/225 (5%)
Query: 11 ISIFALFMQM-GLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFW--SGQ 67
F + +Q + +IT+L +++SW V+ K+ T+ + + F Q F +G+
Sbjct: 365 FGYFGVIVQSVTVDAWVVITILLGMALVSWVVMWTKARYVGTVDKANQYFVQRFREVAGR 424
Query: 68 SL------ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQ--DRIDRMMDV 119
L + + + L ++ + + E D R+ I + + I MD
Sbjct: 425 HLVGLAHVDEASADGRRLYQSSLYRLYKAGVHEIHSRVDGNGRTVITSESIEAIRASMDA 484
Query: 120 AIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIES 178
+ RE + +++ + L S G +G+LG V+G+M F +IA NV PGI +
Sbjct: 485 TLVRENQRLSKSMVLLTIAISGGPFLGLLGTVVGVMITFAAIAAAGDVNVNAIAPGIAAA 544
Query: 179 LISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
L++ + GL V+IP+ YN + +K M+ F +EF L+
Sbjct: 545 LLATVTGLFVAIPALFGYNYLLIRNKNVTANMQVFVDEFVTRLAE 589
>gi|312114309|ref|YP_004011905.1| MotA/TolQ/ExbB proton channel [Rhodomicrobium vannielii ATCC 17100]
gi|311219438|gb|ADP70806.1| MotA/TolQ/ExbB proton channel [Rhodomicrobium vannielii ATCC 17100]
Length = 221
Score = 149 bits (377), Expect = 3e-34, Method: Composition-based stats.
Identities = 47/211 (22%), Positives = 86/211 (40%), Gaps = 15/211 (7%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
++I L VK ++ +L + SI W++ I+K I ++ E
Sbjct: 4 LAIGDLLANADPVVKGVMAILVVASIACWTIAIEKFARLIAFSKEVAALES--------- 54
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
+ L A + E +S P R+++ + A +L+ +
Sbjct: 55 --ANPADGAPSSWLVARMRQIVDEEPRS---SGERPSEFSARLEKSLHGEAAAQLQRLQA 109
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVS 189
L FL ++ S VG+ G V G+M F IA ++ V PGI E+L + +GL +
Sbjct: 110 GLPFLATVGSTAPFVGLFGTVWGIMRSFAGIAAAKDTSLAVVAPGIAEALFATAVGLVAA 169
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFANEFSAI 220
IP+ I YN+ + A + + ++ +
Sbjct: 170 IPAVIFYNQINVMLGRVAERFAAASTRYAKL 200
>gi|194333581|ref|YP_002015441.1| protein TolQ [Prosthecochloris aestuarii DSM 271]
gi|194311399|gb|ACF45794.1| protein TolQ [Prosthecochloris aestuarii DSM 271]
Length = 220
Score = 149 bits (377), Expect = 3e-34, Method: Composition-based stats.
Identities = 51/184 (27%), Positives = 92/184 (50%), Gaps = 3/184 (1%)
Query: 35 SILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSE 94
S+LSW++II K + R+F F+ SL+ V + + N LA +F + E
Sbjct: 30 SVLSWTIIIFKYGLIRKAMSESRDFLDYFFEVSSLDKVFGESERYRNGALARVFRAGYIE 89
Query: 95 WKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGM 154
++ D+ + ++RI R + E ++ ++FL ++ + +G+ G V G+
Sbjct: 90 YRALSDR--QDTRFCEERIARAIKREANAESSRLSRYVAFLATVGNTAPFIGLFGTVWGI 147
Query: 155 MGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGF 213
M FQSI S ++ ++ PGI E+LI+ GL +IPS I +N F + ++ F
Sbjct: 148 MNSFQSIGLTQSASLATVAPGIAEALIATAAGLAAAIPSVIGFNYFSQQIALVERDLDDF 207
Query: 214 ANEF 217
+ E+
Sbjct: 208 SAEY 211
>gi|153003166|ref|YP_001377491.1| MotA/TolQ/ExbB proton channel [Anaeromyxobacter sp. Fw109-5]
gi|152026739|gb|ABS24507.1| MotA/TolQ/ExbB proton channel [Anaeromyxobacter sp. Fw109-5]
Length = 255
Score = 149 bits (376), Expect = 3e-34, Method: Composition-based stats.
Identities = 46/234 (19%), Positives = 95/234 (40%), Gaps = 10/234 (4%)
Query: 5 GLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFW 64
G A + + + + +L I SI S V+ ++ V + + R++
Sbjct: 20 GAAPGTFDLVNMIKSIEGFGIVVAVILGIMSIYSLGVMAERLVTYSRANKASRQYAASLR 79
Query: 65 S---GQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDK-GARSPIGIQD-----RIDR 115
G + + L + A+ E+ + + R P + D ++R
Sbjct: 80 DLLPGGKFGDAVELSRKLKRGHLPKVLGLAIEEYSRGVEALHTRGPKDVGDFDVIAAVNR 139
Query: 116 MMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG- 174
++ + R + ++ L L ++ S VG+LG V G++ FQ++A S + ++ G
Sbjct: 140 AVERSSLRTVNDLRRGLGSLATIGSTAPFVGLLGTVWGIIKAFQNMAATGSGGLGTVSGA 199
Query: 175 IIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
I E+LI+ GL V+IP+ + +N + + + A E ++ G
Sbjct: 200 IAEALINTAFGLLVAIPAVMMFNYLTNRVEDMQVDITDSATELVDFFMKEGRGE 253
>gi|71906754|ref|YP_284341.1| MotA/TolQ/ExbB proton channel [Dechloromonas aromatica RCB]
gi|71846375|gb|AAZ45871.1| outer membrane transport energization protein ExbB [Dechloromonas
aromatica RCB]
Length = 247
Score = 149 bits (376), Expect = 3e-34, Method: Composition-based stats.
Identities = 42/215 (19%), Positives = 87/215 (40%), Gaps = 3/215 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
L+ L I +L + SI SW +I+ K+ ++ RR + + + E
Sbjct: 9 FGFAHLWASGDLISHAIACILAVMSIASWYLILAKAWDWFRARRAAKAMAAFWAASSVSE 68
Query: 71 TVCKSLKNHHNIGLAAIFMSAM--SEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ + K + A + A + ++ S ++++R + ++ +
Sbjct: 69 GIEQLRKAGEDSPYAQLATQANCCNHDCEAVTGRLASRFDPAEQMERALRQQLSATQARM 128
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLC 187
L+ L + + VG+ G V G+ +I + I G + E+LI GL
Sbjct: 129 ENGLTLLATTGATSPFVGLFGTVWGIYHALVAIGISGQAALEKIAGPVGEALIMTAAGLA 188
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
V++P+ AYN F ++ ++ FA++ A +
Sbjct: 189 VALPAVFAYNAFTRANRVLLADLDAFAHDLHAFFT 223
>gi|254521942|ref|ZP_05133997.1| biopolymer transport ExbB protein [Stenotrophomonas sp. SKA14]
gi|219719533|gb|EED38058.1| biopolymer transport ExbB protein [Stenotrophomonas sp. SKA14]
Length = 253
Score = 149 bits (376), Expect = 3e-34, Method: Composition-based stats.
Identities = 42/212 (19%), Positives = 89/212 (41%), Gaps = 9/212 (4%)
Query: 20 MGLAV-KCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKN 78
AV ++ L + S +SW + + L+ LFW + + ++++
Sbjct: 36 GDFAVSWVVLLTLIVMSAMSWYWTVINIFRSVRLKSAADRVVSLFWDTPNAQDAIRAMEE 95
Query: 79 HHNI-GLAAIFMSAMSEWKKSCDKGARSPIGI------QDRIDRMMDVAIARELEEITEK 131
+ I + A + G+ + +DR + A+ RE ++
Sbjct: 96 QPASEPFSKIALDAAQAAAHHQRAEGGATGGVGENLSRSEFVDRALRQAVTRESNKLQSG 155
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSI 190
++ L ++ + VG+LG V G+ G I S ++ ++ G + E+LI +GL V+I
Sbjct: 156 MTLLATVGATAPFVGLLGTVWGIYGALIKIGATGSASIDAVAGPVGEALIMTAIGLFVAI 215
Query: 191 PSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
P+ A+N F + + + + FA++ +
Sbjct: 216 PAVFAFNFFSKVNSATISKFDTFAHDLHDFFA 247
>gi|190574648|ref|YP_001972493.1| putative transmembrane MotA/TolQ/ExbB transport protein
[Stenotrophomonas maltophilia K279a]
gi|190012570|emb|CAQ46198.1| putative transmembrane MotA/TolQ/ExbB transport protein
[Stenotrophomonas maltophilia K279a]
Length = 594
Score = 149 bits (376), Expect = 3e-34, Method: Composition-based stats.
Identities = 55/230 (23%), Positives = 101/230 (43%), Gaps = 13/230 (5%)
Query: 12 SIFALFMQM-GLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLF--WSGQS 68
S FA ++ ++ +L + +LSW+++I K +F + F + F SG
Sbjct: 358 SHFAFILKAMPFDAWVVVAILGLMMLLSWAIMIAKGRHFGRTSKANAVFTESFGKLSGVP 417
Query: 69 LETVC------KSLKNHHNIGLAAIFMSAMSEWKKSCDKGARS---PIGIQDRIDRMMDV 119
L T+ K+ H+ L I+ A+ E ++ + S I MD
Sbjct: 418 LRTLSDMDRQGKAPTAMHDGSLWRIYQVAIDEMQQRHQRDGNSGYLSGATIAAIRASMDA 477
Query: 120 AIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIES 178
+ RE E + ++++L + VG+ G V+G+M F A + ++ PG+ +
Sbjct: 478 VMVREQEAMARRMNWLSTTIEGAPYVGLFGTVIGIMLVFVVAAMAGAVDINSVAPGMAAA 537
Query: 179 LISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
L+ GL V+IP+ YN ++ M F +EF+A L+ + +G
Sbjct: 538 LLCTAAGLGVAIPALFGYNYLGARAEAIGADMAVFIDEFAARLAEEQDGR 587
>gi|332524698|ref|ZP_08400897.1| putative transport-related membrane protein [Rubrivivax
benzoatilyticus JA2]
gi|332108006|gb|EGJ09230.1| putative transport-related membrane protein [Rubrivivax
benzoatilyticus JA2]
Length = 217
Score = 149 bits (376), Expect = 3e-34, Method: Composition-based stats.
Identities = 40/208 (19%), Positives = 82/208 (39%), Gaps = 3/208 (1%)
Query: 15 ALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCK 74
+ + + + LLF S+ +W +I+ KS+ R FW S+
Sbjct: 6 HFWAEADAVGRIVALLLFTMSVAAWLLIVWKSLLLRRAGADIRRAVPAFWDAASVADGRA 65
Query: 75 SLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSF 134
++ G+ + A + ++ R+ R + A+ R L +
Sbjct: 66 RVQAMDREGVLLPLVDAA--VAPAAGGTLEGAAALEARLTRRLRDALHRGLAHLQFGQVI 123
Query: 135 LGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIPSS 193
L S+ S VG+ G V + I + + + G + E+L+ G+ V++P+
Sbjct: 124 LASIGSTAPFVGLFGTVWAIHHALTGIGDAGTLTIERVAGPVGEALVMTAAGIAVAVPAV 183
Query: 194 IAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+AYN + ++EGFA++ ++
Sbjct: 184 LAYNALGKRVAACEAELEGFAHDLRRMV 211
>gi|224826715|ref|ZP_03699815.1| MotA/TolQ/ExbB proton channel [Lutiella nitroferrum 2002]
gi|224600935|gb|EEG07118.1| MotA/TolQ/ExbB proton channel [Lutiella nitroferrum 2002]
Length = 225
Score = 149 bits (376), Expect = 3e-34, Method: Composition-based stats.
Identities = 53/218 (24%), Positives = 100/218 (45%), Gaps = 3/218 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+++ +F Q + + LL SIL+W VI ++V RR + E W+ +
Sbjct: 1 MNLLTVFHQGDAVLVTVFMLLIAMSILTWYVIALRAVQGWRARRDNKLAEAALWNAANWP 60
Query: 71 TVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
T +L + LA +SA+ + + + + + + R + +A+E
Sbjct: 61 TAEAALAGSTSAYANLARDGLSALRHFHANAQRSLGQACDLNEFLTRAIRKRLAQETGRH 120
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLC 187
++ L S+ S +G+ G V G+ +IA ++ ++ G I E+L++ GL
Sbjct: 121 EAGMTLLASVGSTAPFIGLFGTVWGIYHALVNIAAEGQVSIATVAGPIGEALVATAAGLA 180
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+IP+ +AYN F+ + A QM+ FA++ A L Q
Sbjct: 181 AAIPAVLAYNTFMRLQRVMAQQMDHFAHDLHAQLLTQA 218
>gi|87198042|ref|YP_495299.1| MotA/TolQ/ExbB proton channel [Novosphingobium aromaticivorans DSM
12444]
gi|87133723|gb|ABD24465.1| outer membrane transport energization protein ExbB [Novosphingobium
aromaticivorans DSM 12444]
Length = 249
Score = 149 bits (376), Expect = 3e-34, Method: Composition-based stats.
Identities = 42/203 (20%), Positives = 81/203 (39%), Gaps = 5/203 (2%)
Query: 18 MQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLK 77
Q G + +L I S S+ ++ K + Q++ FW +L L
Sbjct: 26 QQGGFIAYATVVILGIMSFGSFFILFTKFFEQNKILGQYKTIRTTFWKAPTLREGAAKL- 84
Query: 78 NHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGS 137
N + +S + + D + + + A + L FL +
Sbjct: 85 -DKNSAWRQLVDDGISAEDQHSK--MTDALEAHDWLHGSLARSEASINSRLASGLPFLAT 141
Query: 138 MSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIPSSIAY 196
+ + +G+ G V+G+ +I S ++ + G + E+LI LGL V++P+ +AY
Sbjct: 142 VGATSPFIGLFGTVVGIYRALINIGLAGSASIDKVAGPVGEALIMTALGLLVAVPAVLAY 201
Query: 197 NKFIEDSKKFAMQMEGFANEFSA 219
N +K+ A + GF+ + A
Sbjct: 202 NWLQARNKRIAELLSGFSTDVLA 224
>gi|194363787|ref|YP_002026397.1| MotA/TolQ/ExbB proton channel [Stenotrophomonas maltophilia R551-3]
gi|194346591|gb|ACF49714.1| MotA/TolQ/ExbB proton channel [Stenotrophomonas maltophilia R551-3]
Length = 253
Score = 149 bits (376), Expect = 4e-34, Method: Composition-based stats.
Identities = 42/212 (19%), Positives = 88/212 (41%), Gaps = 9/212 (4%)
Query: 20 MGLAV-KCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKN 78
AV ++ L + S +SW + L+ LFW + + ++++
Sbjct: 36 GDFAVSWVVLLTLVVMSAMSWYWTVINIFRATRLKSAADRVVSLFWDTPNAQDAIRAMEE 95
Query: 79 HHNI-GLAAIFMSAMSEWKKSCDKGARSPIGI------QDRIDRMMDVAIARELEEITEK 131
+ I + A + G+ + +DR + A+ RE ++
Sbjct: 96 QPASEPFSKIALDAAQAAAHHQRAEGGATGGVGENLSRSEFVDRALRQAVTRESNKLQSG 155
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSI 190
++ L ++ + VG+LG V G+ G I S ++ ++ G + E+LI +GL V+I
Sbjct: 156 MTLLATVGATAPFVGLLGTVWGIYGALIKIGATGSASIDAVAGPVGEALIMTAIGLFVAI 215
Query: 191 PSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
P+ A+N F + + + + FA++ +
Sbjct: 216 PAVFAFNFFSKINSATISKFDTFAHDLHDFFA 247
>gi|261414613|ref|YP_003248296.1| MotA/TolQ/ExbB proton channel [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|261371069|gb|ACX73814.1| MotA/TolQ/ExbB proton channel [Fibrobacter succinogenes subsp.
succinogenes S85]
Length = 224
Score = 148 bits (375), Expect = 4e-34, Method: Composition-based stats.
Identities = 56/213 (26%), Positives = 96/213 (45%), Gaps = 8/213 (3%)
Query: 16 LFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKS 75
+ Q + I+ +L S+ SW +II K + R +F + F + + K
Sbjct: 1 MITQSDIVTMIILGILAFMSLGSWGIIIVKFFKHKSNLRANAKFFKEFCKLKHFSELQKL 60
Query: 76 LKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI----TEK 131
++ L + + ++E K KG + IQ R +++ AI R +E I
Sbjct: 61 CTVSNDSALRLLSVEVLNEVSKF--KGKVTYESIQHR-SSLLEDAIQRSIEGIRMGEDRY 117
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSI 190
L+FL + S+ G+LG V G+M F I + S ++ V PGI +LI+ + GL V+I
Sbjct: 118 LTFLATSSNLAPFFGLLGTVWGIMIAFFQIGHHGSADLTVVAPGIAMALITTVAGLLVAI 177
Query: 191 PSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
P+S YN F + F ++ ++ R
Sbjct: 178 PASAGYNYFTSKNGSNETSYYNFGSQVLSLFKR 210
>gi|171463474|ref|YP_001797587.1| MotA/TolQ/ExbB proton channel [Polynucleobacter necessarius subsp.
necessarius STIR1]
gi|171193012|gb|ACB43973.1| MotA/TolQ/ExbB proton channel [Polynucleobacter necessarius subsp.
necessarius STIR1]
Length = 201
Score = 148 bits (375), Expect = 4e-34, Method: Composition-based stats.
Identities = 44/201 (21%), Positives = 81/201 (40%), Gaps = 11/201 (5%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
I L+++ + + +L SI++W +++ + + LR+ + + FW S E
Sbjct: 5 FGIANLWLEGDAITRFVALILLTCSIVTWVILLTRLWDLRNLRK-LKPELEQFWRATSFE 63
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQ-----DRIDRMMDVAIAREL 125
+S N I SA ++ +Q + + R + +I
Sbjct: 64 QDLQSFSN----PYYQIAKSASKASLHHQNQSTNHRELLQTLNYSEWMSRSVKNSIDAIA 119
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILL 184
+ + L+FLGS + VG+ G V G+ SI+ S + + G I E LI L
Sbjct: 120 AGLQKGLTFLGSTGAISPFVGLFGTVWGIYHALISISSSGSVQIDQVAGPIGEVLIMTAL 179
Query: 185 GLCVSIPSSIAYNKFIEDSKK 205
GL V+IP+ + +
Sbjct: 180 GLAVAIPAILGFTPLTAPINS 200
>gi|303249617|ref|ZP_07335823.1| biopolymer transport ExbB protein [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|307253229|ref|ZP_07535104.1| Biopolymer transport ExbB protein [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|302651550|gb|EFL81700.1| biopolymer transport ExbB protein [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|306859317|gb|EFM91355.1| Biopolymer transport ExbB protein [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
Length = 222
Score = 148 bits (375), Expect = 5e-34, Method: Composition-based stats.
Identities = 41/215 (19%), Positives = 95/215 (44%), Gaps = 5/215 (2%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+++ L Q + + +L SILSWS+I+ + + I +++ + S +++
Sbjct: 1 MNLTELIKQQDIVLSVSFFILVFMSILSWSIILIRLIKIIGVKKNNQVTFNRIKSDENMN 60
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSE---WKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
K + ++ I + + ++ + + +D + + AI + L +
Sbjct: 61 QA-KKYTQNKRSDISEILQTTFKQCELYQLNGKYNLSHQLPFKDFLTLHLRNAITQSLRK 119
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
L L S+ + +G+ G V G+ I+ ++ ++ I E+L++ +GL
Sbjct: 120 YDGGLVALASIGAVAPFIGLFGTVWGIFNALMDISQQGQVSIATVSAPIGEALVATAMGL 179
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
V+IP+ +AYN ++ + ++ +ANE L
Sbjct: 180 FVAIPAVLAYNLIARLNRNLSQDLDHYANELFIYL 214
>gi|115372382|ref|ZP_01459691.1| TolQ protein [Stigmatella aurantiaca DW4/3-1]
gi|310819523|ref|YP_003951881.1| tolq protein [Stigmatella aurantiaca DW4/3-1]
gi|115370595|gb|EAU69521.1| TolQ protein [Stigmatella aurantiaca DW4/3-1]
gi|309392595|gb|ADO70054.1| TolQ protein [Stigmatella aurantiaca DW4/3-1]
Length = 228
Score = 148 bits (374), Expect = 7e-34, Method: Composition-based stats.
Identities = 54/226 (23%), Positives = 98/226 (43%), Gaps = 8/226 (3%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ---LFWS 65
M ++ ++ GL + II L SI S V+ ++ F R R F +
Sbjct: 1 MQFTLADIWAHTGLFARFIIFTLAFMSIASLVVMAERIFVFRKTRSDSRTFAAKMGAILA 60
Query: 66 GQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
L + L + S ++ +K S + + + R ++ RE+
Sbjct: 61 KGDLTAAANTNLGKDVGHLGRVINSGLTAYKISPS----NKDVAVESVARALERQAQREV 116
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILL 184
+ + L L ++ S VG+LG +G++ FQ +A S + +I GI E+LI+
Sbjct: 117 QSLKRGLGVLATVGSTAPFVGLLGTTMGIVNAFQLMAEAGSGGLGTISAGIAEALITTAF 176
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
GL V+IP+ +AYN ++ + +NEF +++RQ G +
Sbjct: 177 GLLVAIPAVMAYNFLQGWVDARSVDISESSNEFLDVVARQLTGGAA 222
>gi|190572101|ref|YP_001969946.1| putative biopolymer transport exbB protein [Stenotrophomonas
maltophilia K279a]
gi|190010023|emb|CAQ43628.1| putative biopolymer transport exbB protein [Stenotrophomonas
maltophilia K279a]
Length = 253
Score = 148 bits (373), Expect = 7e-34, Method: Composition-based stats.
Identities = 42/212 (19%), Positives = 87/212 (41%), Gaps = 9/212 (4%)
Query: 20 MGLAV-KCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKN 78
AV ++ L S +SW + L+ LFW + + ++++
Sbjct: 36 GDFAVSWVVLLTLIAMSAMSWYWTVINIFRATRLKSAADRVVSLFWDTPNAQDAIRAMEE 95
Query: 79 HHNI-GLAAIFMSAMSEWKKSCDKGARSPIGI------QDRIDRMMDVAIARELEEITEK 131
+ I + A + G+ + +DR + A+ RE ++
Sbjct: 96 QPASEPFSKIALDAAQAAAHHQRAEGGATGGVGENLSRSEFVDRALRQAVTRESNKLQSG 155
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSI 190
++ L ++ + VG+LG V G+ G I S ++ ++ G + E+LI +GL V+I
Sbjct: 156 MTLLATVGATAPFVGLLGTVWGIYGALIKIGATGSASIDAVAGPVGEALIMTAIGLFVAI 215
Query: 191 PSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
P+ A+N F + + + + FA++ +
Sbjct: 216 PAVFAFNFFSKINSATISKFDTFAHDLHDFFA 247
>gi|126209034|ref|YP_001054259.1| biopolymer transport ExbB protein [Actinobacillus pleuropneumoniae
L20]
gi|165977003|ref|YP_001652596.1| biopolymer transport ExbB protein [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
gi|190150901|ref|YP_001969426.1| biopolymer transport ExbB protein [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
gi|303253485|ref|ZP_07339627.1| biopolymer transport ExbB protein [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
gi|307248616|ref|ZP_07530630.1| Biopolymer transport ExbB protein [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
gi|307250849|ref|ZP_07532777.1| Biopolymer transport ExbB protein [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|307255476|ref|ZP_07537282.1| Biopolymer transport ExbB protein [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|307259928|ref|ZP_07541641.1| Biopolymer transport ExbB protein [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
gi|307262057|ref|ZP_07543711.1| Biopolymer transport ExbB protein [Actinobacillus pleuropneumoniae
serovar 12 str. 1096]
gi|307264254|ref|ZP_07545844.1| Biopolymer transport ExbB protein [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
gi|4127364|emb|CAA76936.1| TolQ protein [Actinobacillus pleuropneumoniae]
gi|28572164|gb|AAM63530.1| ExbB [Actinobacillus suis]
gi|28572170|gb|AAM63534.1| ExbB [Actinobacillus suis]
gi|49532664|dbj|BAD26602.1| cytoplasmic membrane protein [Actinobacillus suis]
gi|55978871|gb|AAV68897.1| ExbB [Haemophilus parasuis]
gi|126097826|gb|ABN74654.1| biopolymer transport ExbB protein [Actinobacillus pleuropneumoniae
serovar 5b str. L20]
gi|165877104|gb|ABY70152.1| biopolymer transport ExbB protein [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
gi|189916032|gb|ACE62284.1| biopolymer transport ExbB protein [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
gi|302647729|gb|EFL77943.1| biopolymer transport ExbB protein [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
gi|306854827|gb|EFM87016.1| Biopolymer transport ExbB protein [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
gi|306857099|gb|EFM89227.1| Biopolymer transport ExbB protein [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|306861518|gb|EFM93506.1| Biopolymer transport ExbB protein [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|306865956|gb|EFM97831.1| Biopolymer transport ExbB protein [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
gi|306868236|gb|EFN00059.1| Biopolymer transport ExbB protein [Actinobacillus pleuropneumoniae
serovar 12 str. 1096]
gi|306870425|gb|EFN02179.1| Biopolymer transport ExbB protein [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
Length = 222
Score = 148 bits (373), Expect = 8e-34, Method: Composition-based stats.
Identities = 42/215 (19%), Positives = 96/215 (44%), Gaps = 5/215 (2%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+++ L Q + + +L SILSWS+I+ + + I +++ + L S +++
Sbjct: 1 MNLTELIKQQDIVLSVSFFILVFMSILSWSIILIRLIKIIGVKKNNQVTFNLIKSDENMN 60
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSE---WKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
K + ++ I + + ++ + + +D + + AI + L +
Sbjct: 61 QA-KKYTQNKRSDISEILQTTFKQCELYQLNGKYNLSHQLPFKDFLTLHLRNAITQSLRK 119
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
L L S+ + +G+ G V G+ I+ ++ ++ I E+L++ +GL
Sbjct: 120 YDGGLVALASIGAVAPFIGLFGTVWGIFNALMDISQQGQVSIATVSAPIGEALVATAMGL 179
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
V+IP+ +AYN ++ + ++ +ANE L
Sbjct: 180 FVAIPAVLAYNLIARLNRNLSQDLDHYANELFIYL 214
>gi|330944982|gb|EGH46769.1| TonB system transport protein ExbB2 [Pseudomonas syringae pv. pisi
str. 1704B]
Length = 199
Score = 147 bits (372), Expect = 1e-33, Method: Composition-based stats.
Identities = 41/171 (23%), Positives = 85/171 (49%), Gaps = 5/171 (2%)
Query: 57 REFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKK---SCDKGARSPIGIQDRI 113
R+F + FW+ SL++ + L A + ++ + + + I QDR+
Sbjct: 2 RKFHKRFWAASSLDSAAQ-LAQEQPGAAARVALAGYAAIQVPDGAQANDLSQSINHQDRL 60
Query: 114 DRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP 173
+R + I RE + L+ L S+ S +G+ G V G+M + I+ S ++ ++
Sbjct: 61 ERALRQQIVRERRSLETGLAILASIGSTSPFIGLFGTVWGIMSALKGISAAGSASLETVA 120
Query: 174 G-IIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
G I +L++ +G+ V++P+ + YN F+ K A ++ FA++F ++ +
Sbjct: 121 GPIGAALVATGVGIAVAVPAVLVYNYFLRRLKLTAADLDDFAHDFYSLAQK 171
>gi|15836615|ref|NP_297303.1| biopolymer transport ExbB protein [Xylella fastidiosa 9a5c]
gi|9104772|gb|AAF82823.1|AE003856_2 biopolymer transport ExbB protein [Xylella fastidiosa 9a5c]
Length = 254
Score = 147 bits (371), Expect = 1e-33, Method: Composition-based stats.
Identities = 44/230 (19%), Positives = 97/230 (42%), Gaps = 14/230 (6%)
Query: 7 AIMDISIFALF--MQMGL----AVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
A+ + ++ L M ++ +L S LSW + + + L+
Sbjct: 19 ALSKMGVWHLIGEMTASPIEFAVSWAVLIILVTMSSLSWYWTVINILRALRLKGAGYLVI 78
Query: 61 QLFWSGQSLETVCKSL-KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDR------I 113
FW ++ + ++ K + + I + A + +G+ +R +
Sbjct: 79 NAFWKAKNPQEAISAMEKQSASEPFSKIALDAAQAAAHHQRTEGGNAMGLGERLSLSEFV 138
Query: 114 DRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP 173
DR + A+ RE ++ ++ L ++ + VG+LG V G+ +I S ++ ++
Sbjct: 139 DRALRQAVTRESSKLQSGMTLLATVGATAPFVGLLGTVWGIYNALITIGATGSASIDAVA 198
Query: 174 G-IIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
G + E+LI +GL V+IP+ A+N F + + + + FA++ +
Sbjct: 199 GPVGEALIMTAIGLFVAIPAVFAFNFFSKINSSTIAKFDTFAHDLHDFFA 248
>gi|91776754|ref|YP_546510.1| MotA/TolQ/ExbB proton channel [Methylobacillus flagellatus KT]
gi|91710741|gb|ABE50669.1| outer membrane transport energization protein ExbB [Methylobacillus
flagellatus KT]
Length = 555
Score = 146 bits (370), Expect = 2e-33, Method: Composition-based stats.
Identities = 53/212 (25%), Positives = 96/212 (45%), Gaps = 4/212 (1%)
Query: 16 LFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV-CK 74
LF + + +I +L I ++S +V++ K+ + +EF Q F + + +
Sbjct: 340 LFESLTVDAWVVIIILAIMFVISAAVMVAKARQVARNDKANQEFLQRFNQANNAQLLQLD 399
Query: 75 SLKNHHNIGLAAIFMSAMSEWKK--SCDKGARSPIGIQDRIDRMMDVAIARELEEITEKL 132
N + LA ++M+ + E +K + D D I +D + RE +++ +
Sbjct: 400 QGNNKTDSTLARLYMAGLREIRKRYAADGSVSLSGASLDAIKAAIDADLIRENKKLNANI 459
Query: 133 SFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIP 191
L S G +G+LG V+G+M F IA NV PGI +L++ + GL V+IP
Sbjct: 460 VLLTIAISGGPFLGLLGTVVGVMITFAEIAAAGDVNVNAIAPGIAAALMATVAGLAVAIP 519
Query: 192 SSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
+ YN K M+ F +E+ ++
Sbjct: 520 ALFGYNYLSSRIKNINTDMQIFVDEYVTRVAE 551
>gi|55978881|gb|AAV68902.1| ExbB [Haemophilus parasuis]
Length = 222
Score = 146 bits (369), Expect = 2e-33, Method: Composition-based stats.
Identities = 42/215 (19%), Positives = 96/215 (44%), Gaps = 5/215 (2%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+++ L Q + + +L SILSWS+I+ + + I +++ + L S +++
Sbjct: 1 MNLTELIKQQDIVLSVSFFILVFMSILSWSIILIRLIKIIGVKKNNQVTFNLIKSDENMN 60
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSE---WKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
K + ++ I + + ++ + + +D + + AI + L +
Sbjct: 61 XA-KKYTQNKRSDISEILQTTFKQCELYQLNGKYNLSHQLPFKDFLTLHLRNAITQSLRK 119
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGL 186
L L S+ + +G+ G V G+ I+ ++ ++ I E+L++ +GL
Sbjct: 120 YDGGLVALASIGAVAPFIGLFGTVWGIFNALMDISQQGQVSIATVSAPIGEALVATAMGL 179
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
V+IP+ +AYN ++ + ++ +ANE L
Sbjct: 180 FVAIPAVLAYNLIARLNRNLSQDLDHYANELFIYL 214
>gi|90424486|ref|YP_532856.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris BisB18]
gi|90106500|gb|ABD88537.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris BisB18]
Length = 655
Score = 146 bits (368), Expect = 3e-33, Method: Composition-based stats.
Identities = 51/218 (23%), Positives = 88/218 (40%), Gaps = 23/218 (10%)
Query: 25 KCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFW-SGQSLETVCK--------- 74
+I +L I ++SW V+I + + + R F + F S LE + +
Sbjct: 419 WVVIGILAIMMVISWIVMIDRVSYLNRIAKGNRLFLKHFRESATDLEGLLQFDREETDAS 478
Query: 75 --------SLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQ----DRIDRMMDVAIA 122
K H+ L +F + E ++ P + I ++D
Sbjct: 479 IAGKSDTQDHKAIHSAPLHRLFHIGVQEIRRRFSANGGGPRLLSPQAIQSIRAVLDSGFI 538
Query: 123 RELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLIS 181
E + + + + L S G +G+LG V+G+M F +IA NV PGI +L++
Sbjct: 539 HETQRLNKMMVMLTIAISGGPFLGLLGTVVGVMITFAAIAASGDVNVNAIAPGIAAALVA 598
Query: 182 ILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
+ GL V+IP+ YN K +M+ F +E
Sbjct: 599 TVAGLAVAIPALFGYNYLTIRIKDSTNEMQVFVDELVT 636
>gi|327399148|ref|YP_004340017.1| MotA/TolQ/ExbB proton channel [Hippea maritima DSM 10411]
gi|327181777|gb|AEA33958.1| MotA/TolQ/ExbB proton channel [Hippea maritima DSM 10411]
Length = 191
Score = 146 bits (368), Expect = 3e-33, Method: Composition-based stats.
Identities = 43/203 (21%), Positives = 78/203 (38%), Gaps = 21/203 (10%)
Query: 17 FMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSL 76
F +G ++ +L + S+ SW+ I K + L R+ + F F +
Sbjct: 8 FSHVGSVAVAVLIILAVMSVFSWAFIFYKWLQLKGLDRKNKVFLNKF------------I 55
Query: 77 KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLG 136
+ L A + K+ D A + E+ +L
Sbjct: 56 ETKDKTSLEA--------FAKASDSIAGKLYLLNKESSSSAFTFFEMIARELEGGFPWLA 107
Query: 137 SMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCVSIPSSIA 195
S+ + VG+ G V G++ F +I S + ++ PGI E+LI+ G+ V++P+ I
Sbjct: 108 SVGATAPFVGLFGTVWGIINAFNNIGNVQSVTIATVAPGISEALITTAAGIFVAVPAVIG 167
Query: 196 YNKFIEDSKKFAMQMEGFANEFS 218
YN +++GF S
Sbjct: 168 YNILHTKLSSLLNELDGFLEALS 190
>gi|146282081|ref|YP_001172234.1| TonB system transport protein ExbB [Pseudomonas stutzeri A1501]
gi|145570286|gb|ABP79392.1| TonB system transport protein ExbB [Pseudomonas stutzeri A1501]
Length = 206
Score = 146 bits (368), Expect = 3e-33, Method: Composition-based stats.
Identities = 45/186 (24%), Positives = 84/186 (45%), Gaps = 8/186 (4%)
Query: 44 QKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAM-----SEWKKS 98
K + RRQ + F + FW L T + + +A I E ++
Sbjct: 2 VKLAQSMKARRQNKHFLKAFWGAPDLLTAAEHASQYPG-PMARIANRGFLAMAPDETPRN 60
Query: 99 CDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFF 158
+ A+S I +R++R + I +E + L+ L S+ S +G+ G V G+M
Sbjct: 61 TLQLAQS-IDRGNRVERNLRQQILKERRALEAGLAVLASIGSTSPFIGLFGTVWGIMDAL 119
Query: 159 QSIAGYYSNNVVSIPG-IIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEF 217
I + + ++ G I +LI+ +G+ V++P+ + YN F+ K M+ FA++F
Sbjct: 120 TMIGVTGNAGLDTVAGPIGHALIATGVGIAVAVPAVLIYNFFLRRLKLAGAHMDDFAHDF 179
Query: 218 SAILSR 223
++ R
Sbjct: 180 DSLAQR 185
>gi|196233275|ref|ZP_03132121.1| MotA/TolQ/ExbB proton channel [Chthoniobacter flavus Ellin428]
gi|196222746|gb|EDY17270.1| MotA/TolQ/ExbB proton channel [Chthoniobacter flavus Ellin428]
Length = 254
Score = 145 bits (367), Expect = 4e-33, Method: Composition-based stats.
Identities = 49/218 (22%), Positives = 89/218 (40%), Gaps = 15/218 (6%)
Query: 17 FMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSL 76
F L K I+ LFI SI SWSV++ K + + +F + F S + +
Sbjct: 20 FDHSTLPGKLILFTLFIASIFSWSVMVTKFRLVRRAQTRRAQFLESFRSDRQPLRIYTDR 79
Query: 77 KNHHNIGLAAIFMSAMSE--------------WKKSCDKGARSPIGIQDRIDRMMDVAIA 122
+ + A++ + E ++ D R + M+ A+
Sbjct: 80 TRYDGAPVFAVYRAGCRELTFQLLGSAEVDETFRARLDIAQRISPAQMRVVTTAMERAVG 139
Query: 123 RELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI-AGYYSNNVVSIPGIIESLIS 181
+ ++ L + S +G+LG V G+M F + A +N PG+ +LI+
Sbjct: 140 ETALRLESQMILLATAVSGAPFLGLLGTVWGVMDTFGDVAAAGSANLAAMAPGVSAALIT 199
Query: 182 ILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
+ GL V+IP+ YN + + + ++ FA E S+
Sbjct: 200 TVTGLLVAIPAMFGYNYLVTTIRAMIVGLDNFAAELSS 237
>gi|297537933|ref|YP_003673702.1| MotA/TolQ/ExbB proton channel [Methylotenera sp. 301]
gi|297257280|gb|ADI29125.1| MotA/TolQ/ExbB proton channel [Methylotenera sp. 301]
Length = 569
Score = 145 bits (366), Expect = 5e-33, Method: Composition-based stats.
Identities = 54/209 (25%), Positives = 94/209 (44%), Gaps = 6/209 (2%)
Query: 16 LFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFW--SGQSLETVC 73
L + + K +I +L + +S V+ K++ + ++F F SG L ++
Sbjct: 354 LINSLTIDAKVVIAILAVMFAISVWVMWSKAMLVSRTDKDNKKFLARFQKTSGDDLLSL- 412
Query: 74 KSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPI--GIQDRIDRMMDVAIARELEEITEK 131
N+ N L ++ + + E KK +G + + D I +D + RE +
Sbjct: 413 DKGANYPNSSLFKLYQAGVREMKKRQHEGEKLSLSGASMDAIKAAIDADLVRETQRQNAG 472
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSI 190
+ L S G +G+LG V+G+M F +IA NV PGI +L++ + GL V+I
Sbjct: 473 MVLLTIAISGGPFLGLLGTVVGVMITFAAIAAAGDVNVNAIAPGIAAALLATVAGLAVAI 532
Query: 191 PSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
P+ YN K + M+ F +EF
Sbjct: 533 PALFGYNYLASRVKNITIAMQIFVDEFVT 561
>gi|46369620|gb|AAS89660.1| ExbB-like protein [Yersinia ruckeri]
Length = 153
Score = 144 bits (365), Expect = 6e-33, Method: Composition-based stats.
Identities = 30/154 (19%), Positives = 70/154 (45%), Gaps = 2/154 (1%)
Query: 9 MDISIFALFMQMGLAVKCIITLL-FIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
MD+S++ ++ + VK ++ L + S+++WS++ K + RR+ + + S
Sbjct: 1 MDLSVWGMYQHADVVVKAVMIGLVLLASVVTWSILFSKGMELYRARRRLHQEHMVLGSAT 60
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+L + ++ + + +E ++ G+ G ++R M+ +A +
Sbjct: 61 NLNDALAQADDFAPESISGMLLRE-AENERQLSAGSSDNSGTKERASFRMERRVAAVSRQ 119
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI 161
+ + FL ++ + VG+ G V G+M F I
Sbjct: 120 MGKGTGFLATIGAISPFVGLFGTVWGIMNSFIGI 153
>gi|253686555|ref|YP_003015745.1| MotA/TolQ/ExbB proton channel [Pectobacterium carotovorum subsp.
carotovorum PC1]
gi|251753133|gb|ACT11209.1| MotA/TolQ/ExbB proton channel [Pectobacterium carotovorum subsp.
carotovorum PC1]
Length = 238
Score = 144 bits (365), Expect = 7e-33, Method: Composition-based stats.
Identities = 54/215 (25%), Positives = 105/215 (48%), Gaps = 7/215 (3%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
M + LF G +I LL +FS+++W + + K V + +R+ R F FW
Sbjct: 1 MTLGHIELFSAEG----AVILLLLLFSLVTWGLGLLKFVQYGRAQRRDRRFRAAFWQQDD 56
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ ++ LA + ++A+ ++ + A + I + DR++R + I RE +
Sbjct: 57 VSQTPETSAKQPGS-LANLALAAVKAPEQMSGQLALN-IHLPDRVERALQQQIQRERRTL 114
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLC 187
L+ L S+ S +G+ G V G+M Q I S ++ ++ G I +LI+ +G+
Sbjct: 115 ESGLAVLASIGSTSPFIGLFGTVWGIMAALQEIGLSGSASLDTVAGPIGNALIATGIGIA 174
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
V++P+ + YN F+ K M+ FA++ +++
Sbjct: 175 VAVPAVLIYNYFLRRLKLAVADMDDFAHDVYSVMQ 209
>gi|227113236|ref|ZP_03826892.1| putative biopolymer transport protein [Pectobacterium carotovorum
subsp. brasiliensis PBR1692]
Length = 238
Score = 144 bits (365), Expect = 7e-33, Method: Composition-based stats.
Identities = 54/217 (24%), Positives = 105/217 (48%), Gaps = 7/217 (3%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
M + LF G +I LL +FS+++W + + K V + +R+ R F FW
Sbjct: 1 MTLGHIELFSAEG----AVILLLLLFSLVTWGLGLLKFVQYGRAQRRDRRFRAAFWQQDD 56
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ ++ LA + ++A+ ++ + A + I + DR++R + I RE +
Sbjct: 57 VSQTPETSAKQPGS-LANLALAAVKAPERISGQLALN-IHLPDRVERALQQQIQRERRSL 114
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLC 187
L+ L S+ S +G+ G V G+M Q I S ++ ++ G I +LI+ +G+
Sbjct: 115 ESGLAVLASIGSTSPFIGLFGTVWGIMAALQEIGLSGSASLDTVAGPIGNALIATGIGIA 174
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
V++P+ + YN F+ K M+ FA++ +++
Sbjct: 175 VAVPAVLIYNYFLRRLKLAVADMDDFAHDVYSVMQAH 211
>gi|78061937|ref|YP_371845.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. 383]
gi|77969822|gb|ABB11201.1| outer membrane transport energization protein ExbB [Burkholderia
sp. 383]
Length = 598
Score = 144 bits (364), Expect = 8e-33, Method: Composition-based stats.
Identities = 56/225 (24%), Positives = 104/225 (46%), Gaps = 12/225 (5%)
Query: 11 ISIFALFMQM-GLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFW--SGQ 67
F + +Q + +IT+L +++SW V+ K+ T+ + + F Q F +G+
Sbjct: 362 FGYFGVIVQSVTVDAWVVITILLGMALVSWIVMWTKARYVGTVDKANQYFVQRFREVAGR 421
Query: 68 SL------ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQ--DRIDRMMDV 119
L + + + L ++ + + E D R+ I + + I MD
Sbjct: 422 HLVGLAHVDEASADGRRLYQSSLYRLYKAGVHEIYSRVDNNGRTVITSESIEAIRASMDA 481
Query: 120 AIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIES 178
+ RE +++++ + L S G +G+LG V+G+M F +IA NV PGI +
Sbjct: 482 TLVRENQKLSKSMVLLTIAISGGPFLGLLGTVVGVMITFAAIAAAGDVNVNAIAPGIAAA 541
Query: 179 LISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
L++ + GL V+IP+ YN + +K M+ F +EF L+
Sbjct: 542 LLATVTGLFVAIPALFGYNYLLIRNKNVTANMQVFVDEFVTRLAE 586
>gi|108763298|ref|YP_629705.1| MotA/TolQ/ExbB proton channel family protein [Myxococcus xanthus DK
1622]
gi|108467178|gb|ABF92363.1| transporter, MotA/TolQ/ExbB proton channel family [Myxococcus
xanthus DK 1622]
Length = 227
Score = 144 bits (364), Expect = 8e-33, Method: Composition-based stats.
Identities = 54/223 (24%), Positives = 100/223 (44%), Gaps = 8/223 (3%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ---LFWS 65
M ++ ++ GL + II L I SI S V+ ++ + F R R F +
Sbjct: 1 MQFTLAEIWDHTGLFARMIIFTLGIMSIASLVVLAERMIVFRKTRSDSRNFAAKMGAILA 60
Query: 66 GQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
L T + L + S ++ ++ S + + + + R ++ RE+
Sbjct: 61 KGDLNTAANTNLGKDVGHLGRVINSGLTAYRISPNNKDVA----VESVARALERQAQREV 116
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILL 184
+ + L L ++ S VG+LG +G++ FQ +A S + +I GI E+LI+
Sbjct: 117 QSMKRGLGLLATVGSTAPFVGLLGTTMGIVNAFQLMAQAGSGGLGTISAGIAEALITTAF 176
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEG 227
GL V+IP+ +AYN ++ + +NEF +++R G
Sbjct: 177 GLLVAIPAVMAYNFLQGWVDARSVDISESSNEFLDVVARHLGG 219
>gi|218461494|ref|ZP_03501585.1| protein transporter protein [Rhizobium etli Kim 5]
Length = 122
Score = 144 bits (363), Expect = 1e-32, Method: Composition-based stats.
Identities = 62/119 (52%), Positives = 88/119 (73%)
Query: 7 AIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG 66
A D+S+++LFMQ G+ VK ++ L S+ +W+++I K + + RRQF +FEQ+FWSG
Sbjct: 4 ATTDVSLWSLFMQAGIVVKLVMLGLIAASVWTWAIVIDKYLAYGRARRQFDKFEQVFWSG 63
Query: 67 QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
QSLE + +SL +N GLA+IF++AM EWKKS ++GARSPIG+Q RIDR MD +ARE
Sbjct: 64 QSLEELYRSLSERNNTGLASIFVAAMREWKKSFERGARSPIGLQMRIDRAMDATLARET 122
>gi|85713848|ref|ZP_01044837.1| MotA/TolQ/ExbB proton channel [Nitrobacter sp. Nb-311A]
gi|85717558|ref|ZP_01048502.1| MotA/TolQ/ExbB proton channel [Nitrobacter sp. Nb-311A]
gi|85695639|gb|EAQ33553.1| MotA/TolQ/ExbB proton channel [Nitrobacter sp. Nb-311A]
gi|85698974|gb|EAQ36842.1| MotA/TolQ/ExbB proton channel [Nitrobacter sp. Nb-311A]
Length = 205
Score = 143 bits (362), Expect = 1e-32, Method: Composition-based stats.
Identities = 52/195 (26%), Positives = 88/195 (45%), Gaps = 4/195 (2%)
Query: 33 IFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAM 92
S+++W++ I K V RR + +SL +L + LA++ SAM
Sbjct: 1 FASLVTWTICIAKMVELSLARRNLGTALREISESRSLAEAQMALGARDGV-LASLLASAM 59
Query: 93 SEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVL 152
E + S G S GI++R + E + + L ++ + VG+ G V
Sbjct: 60 HEARLSA--GISSDAGIKERAASSFAEIVRAESRRVRLGMGLLATIGATSPFVGLFGTVW 117
Query: 153 GMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
G+M F I+ + N+ V PGI E+L++ LGL +IP+ I YN F +K + +
Sbjct: 118 GIMNSFIGISKAQTTNLAVVAPGIAEALLATALGLVAAIPAVIIYNHFARVTKGYIELVS 177
Query: 212 GFANEFSAILSRQTE 226
+ +LSR +
Sbjct: 178 RASGSAGRLLSRDLD 192
>gi|258591850|emb|CBE68153.1| MotA/TolQ/ExbB proton channel precursor [NC10 bacterium 'Dutch
sediment']
Length = 225
Score = 143 bits (362), Expect = 2e-32, Method: Composition-based stats.
Identities = 51/224 (22%), Positives = 96/224 (42%), Gaps = 10/224 (4%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ---LFW 64
+M IF + Q G+ + +L IFSI S +VI ++ F ++ + +
Sbjct: 1 MMGQGIFQVMAQGGI----TMVVLAIFSIFSLAVIGERFYTFYKAQQATGRVAEKGLQYV 56
Query: 65 SGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCD--KGARSPIGIQDRIDRMMDVAIA 122
+ + + + + +A + + + D + + M +
Sbjct: 57 ADGKMAEALRLCEQNDGSPVAKVLQAGLLAIIDRGDPTLSGKQFPRRLESCKGAMQRTTS 116
Query: 123 RELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLIS 181
E+ + L L ++ + VG+ G VLG++ F++IA S + ++ GI E+L++
Sbjct: 117 AEISRLERYLGSLATLGNVSPFVGLFGTVLGIIRAFEAIAKVGSGGIGTVSAGIAEALVA 176
Query: 182 ILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
GL V+IP+ IAYN F+ K F M+ A+E L Q
Sbjct: 177 TAAGLFVAIPAVIAYNYFVGRVKLFTAAMDSAASEMVDRLLDQA 220
>gi|254499314|ref|ZP_05111986.1| truncated biopolymer transport protein TolQ [Legionella drancourtii
LLAP12]
gi|254351469|gb|EET10332.1| truncated biopolymer transport protein TolQ [Legionella drancourtii
LLAP12]
Length = 159
Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats.
Identities = 42/148 (28%), Positives = 79/148 (53%), Gaps = 5/148 (3%)
Query: 78 NHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGS 137
+ G+AAIF + E+ ++ +G + + I R+M ++ A+E E++ + L F S
Sbjct: 9 SDERQGMAAIFHAGFKEFVRARKQGNV----VIEPIQRVMQISHAKEAEKLEQHLPFFAS 64
Query: 138 MSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCVSIPSSIAY 196
+ S VG+ G V G+M FQ++ + + PGI E+L++ LGL +IP+ IAY
Sbjct: 65 VGSIAPYVGLFGTVWGIMTSFQALGHAQQATIAMVAPGISEALVATALGLFTAIPAVIAY 124
Query: 197 NKFIEDSKKFAMQMEGFANEFSAILSRQ 224
N++ + + + F E +++ +Q
Sbjct: 125 NRYTTRANILLNRFDLFQEELISLIEQQ 152
>gi|46447481|ref|YP_008846.1| putative TolQ protein [Candidatus Protochlamydia amoebophila UWE25]
gi|46401122|emb|CAF24571.1| putative TolQ protein [Candidatus Protochlamydia amoebophila UWE25]
Length = 250
Score = 141 bits (357), Expect = 5e-32, Method: Composition-based stats.
Identities = 51/232 (21%), Positives = 97/232 (41%), Gaps = 20/232 (8%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFW--SGQSLE 70
F + Q + K I L+I SI SW V+I K ++ F + F L
Sbjct: 13 FFEAYSQSDVLGKLIFLALYILSICSWIVLIHKLWLTSQAKKYAFRFHEAFQLQKANPLS 72
Query: 71 TVCKSLKN----HHNIGLAAIF-------MSAMSEWKKSCDKGARSPIGIQ----DRIDR 115
++ N + + L + ++ + +SP + D +
Sbjct: 73 LDYDTINNKTHLNPFLDLYKVLKRQTLDVLAKNRHFHTQLSNTPQSPTFLSLSDIDYVAS 132
Query: 116 MMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAG---YYSNNVVSI 172
+ +A +++ + + L L + S +G+LG V G++ F + S + + +
Sbjct: 133 HLSTQVASQIKYLEKNLYVLSTTVSLAPFLGLLGTVWGILTTFAELQSHQSGGSTHQMVL 192
Query: 173 PGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
G+ +L + +LGL +IP+ I YN + + F+M MEGF+N+ A + Q
Sbjct: 193 SGLSLALATTVLGLLDAIPALIGYNYLKNEIRDFSMDMEGFSNDILAAVELQ 244
>gi|297519725|ref|ZP_06938111.1| biopolymer transport protein ExbB [Escherichia coli OP50]
Length = 149
Score = 141 bits (355), Expect = 9e-32, Method: Composition-based stats.
Identities = 32/147 (21%), Positives = 71/147 (48%), Gaps = 3/147 (2%)
Query: 6 LAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS 65
L D+S++ ++ + VKC++ L + S+++W++ KSV F +R+ + +QL
Sbjct: 5 LMQTDLSVWGMYQHADIVVKCVMIGLILASVVTWAIFFSKSVEFFNQKRRLKREQQLLAE 64
Query: 66 GQSLETVCKSLKNHHNIGLA-AIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARE 124
+SL + + L+ + A +E + S +G+ GI++R ++ +A
Sbjct: 65 ARSLNQANDIAADFGSKSLSLHLLNEAQNELELS--EGSDDNEGIKERTSFRLERRVAAV 122
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAV 151
++ +L ++ + VG+ G V
Sbjct: 123 GRQMGRGNGYLATIGAISPFVGLFGTV 149
>gi|146339255|ref|YP_001204303.1| biopolymer transport protein ExbB/TolQ family [Bradyrhizobium sp.
ORS278]
gi|146192061|emb|CAL76066.1| Putative Biopolymer transport protein, ExbB/TolQ family
[Bradyrhizobium sp. ORS278]
Length = 651
Score = 141 bits (355), Expect = 9e-32, Method: Composition-based stats.
Identities = 52/225 (23%), Positives = 92/225 (40%), Gaps = 21/225 (9%)
Query: 25 KCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ-SLETVC---------- 73
+I LL + +++SW V+ + + R F + F G + +
Sbjct: 420 WVVIGLLAVMAVISWFVMYDRVSYLNRISRANATFLKHFRDGTVEISELLSADQQDTDLS 479
Query: 74 --------KSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIG-IQDRIDRMMDVAIARE 124
K + L +F + ++ +G S G + I ++D +E
Sbjct: 480 LGGRITKKKETRALQRSPLFRLFNLGAEQIRRRFARGQSSLSGPAIESIRAVLDSGFVQE 539
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISIL 183
+ + + L S G +G+LG V+G+M F +IA NV PGI +L++ +
Sbjct: 540 TQRLNRMMVMLTIAISGGPFLGLLGTVVGVMITFAAIAATGDVNVNAIAPGIAAALVATV 599
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
GL V+IP+ AYN I K +M+ F +E ++ GN
Sbjct: 600 AGLGVAIPALFAYNYLITRIKDATSEMQVFIDEMITRIAETYSGN 644
>gi|226329175|ref|ZP_03804693.1| hypothetical protein PROPEN_03078 [Proteus penneri ATCC 35198]
gi|225202361|gb|EEG84715.1| hypothetical protein PROPEN_03078 [Proteus penneri ATCC 35198]
Length = 196
Score = 141 bits (355), Expect = 1e-31, Method: Composition-based stats.
Identities = 45/188 (23%), Positives = 88/188 (46%), Gaps = 2/188 (1%)
Query: 40 SVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSC 99
++ K ++LRR+ R +SL K N A F + +E +++
Sbjct: 3 TIFFAKGSYLLSLRRRLRNETAQLVEAKSLNDALAISKKFGNKSATADFFND-AELERTY 61
Query: 100 DKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQ 159
+ ++ GI++R++ M+ +A + E+ +L ++ + +G+ G V G+M F
Sbjct: 62 SQESKVASGIKERVEMRMERRVAAIIRELGRGNGYLATIGAISPFIGLFGTVWGIMNSFI 121
Query: 160 SIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFS 218
IA + N+ V PGI E+L++ +GL +IP+ I YN F + ++ A
Sbjct: 122 GIAHSQTTNLAVVAPGIAEALLATAIGLIAAIPAVIIYNIFARMIAGYRGEIGDIATGVV 181
Query: 219 AILSRQTE 226
++SR +
Sbjct: 182 TLVSRDLD 189
>gi|189500643|ref|YP_001960113.1| protein TolQ [Chlorobium phaeobacteroides BS1]
gi|189496084|gb|ACE04632.1| protein TolQ [Chlorobium phaeobacteroides BS1]
Length = 220
Score = 140 bits (354), Expect = 1e-31, Method: Composition-based stats.
Identities = 47/185 (25%), Positives = 93/185 (50%), Gaps = 3/185 (1%)
Query: 35 SILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSE 94
S+ SW++I+ K+ + R F F+ +++ V +N+ N LA +F + E
Sbjct: 30 SVFSWTIIMMKARFIGRAMSESRGFLHYFFDVSNVDKVFGETENYRNGSLARVFRAGYLE 89
Query: 95 WKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGM 154
++ + + ++RI R + + E + ++ + FL ++ + +G+ G V G+
Sbjct: 90 YRALGE--LKDSERSEERIARAVRREVNEESKSLSRYVPFLATVGNTAPFIGLFGTVWGI 147
Query: 155 MGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGF 213
M F SI S ++ ++ PGI E+LI+ GL +IP++IAYN + + ++ F
Sbjct: 148 MNSFMSIGVTQSASLATVAPGIAEALIATAAGLAAAIPAAIAYNYLTQQINQIERDLDDF 207
Query: 214 ANEFS 218
+ EF
Sbjct: 208 SGEFI 212
>gi|261823525|ref|YP_003261631.1| MotA/TolQ/ExbB proton channel [Pectobacterium wasabiae WPP163]
gi|261607538|gb|ACX90024.1| MotA/TolQ/ExbB proton channel [Pectobacterium wasabiae WPP163]
Length = 238
Score = 140 bits (354), Expect = 1e-31, Method: Composition-based stats.
Identities = 44/186 (23%), Positives = 90/186 (48%), Gaps = 3/186 (1%)
Query: 38 SWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKK 97
+W + + K + +R+ R F FW + ++ LA + ++A+ ++
Sbjct: 26 TWGLGLLKFTQYRLAQRRDRRFRAAFWQQDDVSQTPETSAKQPGS-LANLALAAVKAPER 84
Query: 98 SCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGF 157
+ A + I + DR++R + I RE + L+ L S+ S +G+ G V G+M
Sbjct: 85 ISGQLALN-IHLPDRVERALQQQIQRERRSLESGLAVLASIGSTSPFIGLFGTVWGIMAA 143
Query: 158 FQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANE 216
Q I S ++ ++ G I +LI+ +G+ V++P+ + YN F+ K M+ FA++
Sbjct: 144 LQEIGLSGSASLDTVAGPIGNALIATGIGIAVAVPAVLIYNYFLRRLKLAVADMDDFAHD 203
Query: 217 FSAILS 222
+++
Sbjct: 204 VYSVMQ 209
>gi|325529867|gb|EGD06707.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. TJI49]
Length = 279
Score = 139 bits (352), Expect = 2e-31, Method: Composition-based stats.
Identities = 57/225 (25%), Positives = 102/225 (45%), Gaps = 12/225 (5%)
Query: 11 ISIFALFMQM-GLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFW--SGQ 67
F + +Q + +IT+L + +SW V+ K+ T+ + + F Q F +G+
Sbjct: 43 FGYFGVIVQSVTVDAWVVITILLAMAAVSWVVMWSKARYVGTVDKANQFFVQRFREVAGR 102
Query: 68 SLETVCKSLKNHH------NIGLAAIFMSAMSEWKKSCDKGARSPIGIQ--DRIDRMMDV 119
L + +N L ++ + + E D R+ I + + I MD
Sbjct: 103 HLGGLAHVDENSAEGRRLYQSSLYRLYRAGVHEIHSRVDGNGRTVITTESIEAIRASMDA 162
Query: 120 AIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIES 178
+ RE + +++ + L S G +G+LG V+G+M F +IA NV PGI +
Sbjct: 163 TLVRENQRLSKSMVLLTIAISGGPFLGLLGTVVGVMITFAAIAAAGDVNVNAIAPGIAAA 222
Query: 179 LISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
L++ + GL V+IP+ YN + +K M+ F +EF L+
Sbjct: 223 LLATVTGLFVAIPALFGYNYLLIRNKNVTANMQVFVDEFVTRLAE 267
>gi|294677897|ref|YP_003578512.1| biopolymer transport protein ExbB [Rhodobacter capsulatus SB 1003]
gi|294476717|gb|ADE86105.1| biopolymer transport protein ExbB [Rhodobacter capsulatus SB 1003]
Length = 261
Score = 139 bits (351), Expect = 3e-31, Method: Composition-based stats.
Identities = 52/221 (23%), Positives = 94/221 (42%), Gaps = 10/221 (4%)
Query: 7 AIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG 66
A ++ A+F + V+ ++ L S+L+W++ K V RR+ ++ +
Sbjct: 34 ASEALTPLAMFAHADILVQGVMLGLLAASVLAWAIWAGKLVQLTRARRRLTRDYRVLAAR 93
Query: 67 QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
+L +A + +A +E S GI++R+ + A
Sbjct: 94 GTLGAAL------SGGIVARMQAAARAEIGASA---GLPDAGIKERVAIDLTRIEAGAAR 144
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLG 185
+ ++ +GS+ S VG+ G V G+M F IA S+N+ V PGI E+L++ LG
Sbjct: 145 AMQSGVTAVGSIGSTAPFVGLFGTVWGIMNAFVGIAESGSSNLAVVAPGIAEALMATALG 204
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
L +IP+ + YN + + A LSR +
Sbjct: 205 LVAAIPAVLLYNHLTRAVGGYRAALTDAAALVERTLSRDLD 245
>gi|297519773|ref|ZP_06938159.1| colicin uptake protein TolQ [Escherichia coli OP50]
Length = 143
Score = 138 bits (349), Expect = 5e-31, Method: Composition-based stats.
Identities = 43/143 (30%), Positives = 73/143 (51%), Gaps = 2/143 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
++I LF++ L VK I+ +L FSI SW++IIQ++ R+ FE FWSG L
Sbjct: 1 MNILDLFLKASLLVKLIMLILIGFSIASWAIIIQRTRILNAAAREAEAFEDKFWSGIELS 60
Query: 71 TVCKSLKNHHN--IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ + + + G IF S E+ + + +P + + R M +++ RELE +
Sbjct: 61 RLYQESQGKRDNLTGSEQIFYSGFKEFVRLHRANSHAPEAVVEGASRAMRISMNRELENL 120
Query: 129 TEKLSFLGSMSSAGLLVGILGAV 151
+ FLG++ S +G+ G V
Sbjct: 121 ETHIPFLGTVGSISPYIGLFGTV 143
>gi|326386264|ref|ZP_08207888.1| MotA/TolQ/ExbB proton channel [Novosphingobium nitrogenifigens DSM
19370]
gi|326209489|gb|EGD60282.1| MotA/TolQ/ExbB proton channel [Novosphingobium nitrogenifigens DSM
19370]
Length = 253
Score = 138 bits (348), Expect = 6e-31, Method: Composition-based stats.
Identities = 42/213 (19%), Positives = 86/213 (40%), Gaps = 6/213 (2%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
G +T++ + S S+ ++I K + + Q++ FW +L+
Sbjct: 19 FGFVEALQAGGFISYATVTIMGVMSFGSFFILITKFLEQSKIMGQYK-ALAGFWRAGTLK 77
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
L N + ++ + D + + + A ++
Sbjct: 78 EGAAKL--DKNSAWRQVVEDGIAAEDQHSK--MPDATEAHDWLHGSLARSEASINSKLAG 133
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVS 189
L FL ++ + +G+ G V+G+ +I S ++ + G + ESLI LGL V+
Sbjct: 134 GLPFLATVGATAPFIGLFGTVVGIYRALIAIGLAGSASIDKVAGPVGESLIMTALGLLVA 193
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
+P+ +AYN +K+ A + GF+ + A L+
Sbjct: 194 VPAVLAYNYLQSRNKRIAELLTGFSTDVLAYLA 226
>gi|108763356|ref|YP_628556.1| TonB system transport protein ExbB/TolQ [Myxococcus xanthus DK
1622]
gi|108467236|gb|ABF92421.1| tonB system transport protein ExbB/TolQ [Myxococcus xanthus DK
1622]
Length = 250
Score = 138 bits (347), Expect = 8e-31, Method: Composition-based stats.
Identities = 48/220 (21%), Positives = 95/220 (43%), Gaps = 9/220 (4%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
M+ ++ ++ MG+ I L +F++ S +V ++ F R ++F +G
Sbjct: 1 MNFNLRDIYNHMGVFALGIAWTLILFAVASLAVFFERLFVFFRSRSISKQFASR--AGPL 58
Query: 69 L-----ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAR 123
L E + K + LA + M + + + +G + R + R
Sbjct: 59 LTQHQHEALVKEAEATKGSHLAMLLGGGMKHF-LAKSRVPAGKLGPVELTRRELVRINER 117
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISI 182
++ +S L ++ S VG+LG V+G++ F IA S + ++ GI E+L+
Sbjct: 118 VSADVRRGMSVLATVGSVAPFVGLLGTVVGIIEAFSGIAKEGSGGLGAVSAGIAEALVVT 177
Query: 183 LLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
LGL V+IP+ + +N + + ++ +EF L
Sbjct: 178 ALGLLVAIPAVLMFNFLSTRADSLQLSLDAARSEFMDYLE 217
>gi|53803730|ref|YP_114656.1| MotA/TolQ/ExbB proton channel family protein [Methylococcus
capsulatus str. Bath]
gi|53757491|gb|AAU91782.1| MotA/TolQ/ExbB proton channel family domain protein [Methylococcus
capsulatus str. Bath]
Length = 607
Score = 137 bits (346), Expect = 1e-30, Method: Composition-based stats.
Identities = 58/239 (24%), Positives = 101/239 (42%), Gaps = 25/239 (10%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREF------------ 59
S + + L +I L + ++S V+I K+V +R+ + F
Sbjct: 360 SFGVIIQNVTLDGWVVIALTGVMFVVSVLVMIIKAVVISKIRKDNKAFLTQYEALSPDAD 419
Query: 60 -----------EQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIG 108
E+ + L + + + L I+ + + E KK A+
Sbjct: 420 PGQLDREETEDEKELADSEFLSALVGKHDHFQSSPLYHIYHAGIREVKKRTGSSAKPLTP 479
Query: 109 IQDRIDRM-MDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSN 167
+ R+ +D + RE + + K+ L + G +G+LG V+G+M F IA
Sbjct: 480 EALNVVRVKLDSIVVRESQRLNSKMVLLTIAIAGGPFLGLLGTVVGVMITFAVIAATGDV 539
Query: 168 NVVS-IPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
N+ S PGI +L++ + GL V+IPS AYN + K M F++EF A+LS +
Sbjct: 540 NINSIAPGIAAALLATVAGLAVAIPSLFAYNYLLTQIKDVIADMRVFSDEFLAMLSERV 598
>gi|162453347|ref|YP_001615714.1| tolQ protein [Sorangium cellulosum 'So ce 56']
gi|161163929|emb|CAN95234.1| tolQ protein [Sorangium cellulosum 'So ce 56']
Length = 236
Score = 137 bits (346), Expect = 1e-30, Method: Composition-based stats.
Identities = 45/221 (20%), Positives = 95/221 (42%), Gaps = 5/221 (2%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFW--- 64
+M + ++ MGL K + L + ++ S +V++++ + + R F +
Sbjct: 1 MMQFDLGHIWATMGLLSKLVAFALVLMALASVAVVVERLIALARQASETRRFAREARPVM 60
Query: 65 SGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARE 124
+ + LA + +A+ ++++ + G + + R +
Sbjct: 61 EAWDTARLVSIADGYGRSALARLVGAAVRRFQRAVEAGEGGVPPV-ELARREVSRRREAI 119
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISIL 183
++ LS L ++ S VG+LG V+G++ FQ+IA S + ++ GI E+LI
Sbjct: 120 SADLRRGLSVLATVGSVAPFVGLLGTVIGIITAFQTIASTGSGGLGAVSAGIAEALIVTA 179
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
LGL V+IP+ + +N + +E A E + +
Sbjct: 180 LGLGVAIPAVLCFNYLTTRIAAVELALERSAGELIDEMENE 220
>gi|88607164|ref|YP_505510.1| TolQ protein [Anaplasma phagocytophilum HZ]
gi|88598227|gb|ABD43697.1| TolQ protein [Anaplasma phagocytophilum HZ]
Length = 234
Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats.
Identities = 46/215 (21%), Positives = 104/215 (48%), Gaps = 11/215 (5%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLET 71
S F +F + + V+ ++ +L FS++SW++I +K +R+ + E +F S +
Sbjct: 16 SAFDVFAEASIVVRLVMLVLLAFSLVSWAIIFKKCFVINRHKRELHDVEVVFNSRGT-AL 74
Query: 72 VCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEK 131
+ + + +A I + ++ +K ++ R ++ + R ++++ E+
Sbjct: 75 GIREIVECGSGVVAKILQHGIKHAQQLHNK--------KEGFHRAINSELTRAVDKLEEQ 126
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQS--IAGYYSNNVVSIPGIIESLISILLGLCVS 189
L L ++ S+ +G+LG + ++ F++ I V P + E+L ++ LGL V+
Sbjct: 127 LGLLSAIGSSAPYIGLLGTLWKVIESFRAVSIGESQQIASVLYPYMAEALYTLALGLLVA 186
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
IP+ + YN F K + ++ E SA ++ +
Sbjct: 187 IPAQLFYNGFSAYVTKLSHRLGNLVYELSAFVTNE 221
>gi|167842102|ref|ZP_02468786.1| MotA/TolQ/ExbB proton channel [Burkholderia thailandensis MSMB43]
Length = 246
Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats.
Identities = 44/204 (21%), Positives = 92/204 (45%), Gaps = 2/204 (0%)
Query: 23 AVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKS-LKNHHN 81
V+ + L +FSI +W++II K++ + R + +L + L+
Sbjct: 9 IVQGALWALGLFSIATWTIIIVKTIQHVRAARADDRASAVLADANNLREIAARPLQAGPK 68
Query: 82 IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSA 141
+ + A+++ + QD ++R + I E + L++L S+ S
Sbjct: 69 ARVTQAALDALADAHAFAGETPEDLWSRQDTLERQLARQIGHERRRLEHALAWLASVGSV 128
Query: 142 GLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIPSSIAYNKFI 200
VG+ G V G++ +I+ S ++ + G I E+L++ +G+ V++P+ +AYN F+
Sbjct: 129 APFVGLFGTVFGIINALGAISHAASASIAVVAGPIGEALVATGIGIAVAVPAVLAYNIFV 188
Query: 201 EDSKKFAMQMEGFANEFSAILSRQ 224
K ++ A + A+ R
Sbjct: 189 RRVKVVVALLDDHAGDLYALAQRD 212
>gi|262197823|ref|YP_003269032.1| MotA/TolQ/ExbB proton channel [Haliangium ochraceum DSM 14365]
gi|262081170|gb|ACY17139.1| MotA/TolQ/ExbB proton channel [Haliangium ochraceum DSM 14365]
Length = 218
Score = 136 bits (342), Expect = 3e-30, Method: Composition-based stats.
Identities = 44/206 (21%), Positives = 89/206 (43%), Gaps = 10/206 (4%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLA 85
++ LL I SI+S V+I++ + F+ RR V ++L + L
Sbjct: 17 WVMWLLVILSIVSVGVMIER-ILFLRARRIDVRELSR--------EVARALDDDDLAPLK 67
Query: 86 AIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLV 145
+ + + + +G D M+ R ++ L LG++ + +
Sbjct: 68 KKYTDSDAMAAQVAIRGLAERHHGTDAASEAMNSGKTRARKDYERYLVILGTLGNNAPFI 127
Query: 146 GILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSK 204
G+ G VLG++ FQ ++G V + GI E+L++ +GL V+IP+ +A+N F +
Sbjct: 128 GLFGTVLGIIQAFQDLSGNAQGGAEVVMGGISEALVATAIGLLVAIPAVVAFNYFNRRVR 187
Query: 205 KFAMQMEGFANEFSAILSRQTEGNIS 230
+ + A+ + L + + +
Sbjct: 188 EAISVTDDIAHTILSELHGRAHRDAT 213
>gi|296136138|ref|YP_003643380.1| MotA/TolQ/ExbB proton channel [Thiomonas intermedia K12]
gi|294340373|emb|CAZ88754.1| putative Biopolymer transport protein MotA/TolQ/ExbB [Thiomonas sp.
3As]
gi|295796260|gb|ADG31050.1| MotA/TolQ/ExbB proton channel [Thiomonas intermedia K12]
Length = 206
Score = 136 bits (342), Expect = 3e-30, Method: Composition-based stats.
Identities = 49/214 (22%), Positives = 91/214 (42%), Gaps = 18/214 (8%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLR----RQFREFEQLFWSGQS 68
+ + G I L + SI++ +VI ++ + R + E + S +
Sbjct: 1 MLQMVEAAGWP----IWPLILCSIVALAVIFERLASLRRARILPTKLLDEALNV--SAKQ 54
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
L K N L A+ S +S + S G+Q+ ++ + +
Sbjct: 55 LPAADVIDKLEQNSPLGAVLASGF----RSVARPHASAAGLQEDLENAGRNQVY----RL 106
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCV 188
+ L+ L +++SA L+G+LG V+GM+ F S + ++ V GI +L + LGL V
Sbjct: 107 QKYLNALATVASAAPLLGLLGTVVGMIEIFGSQSTAGTDPTVLAHGISVALYNTALGLIV 166
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
++PS I Y F + +++E A + L
Sbjct: 167 AVPSLIFYRYFRSRVDDYTVELEQAARRLATHLQ 200
>gi|290954091|ref|ZP_06558712.1| TolQ protein [Francisella tularensis subsp. holarctica URFT1]
gi|295312522|ref|ZP_06803286.1| TolQ protein [Francisella tularensis subsp. holarctica URFT1]
Length = 171
Score = 136 bits (342), Expect = 3e-30, Method: Composition-based stats.
Identities = 39/165 (23%), Positives = 80/165 (48%), Gaps = 2/165 (1%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
IS+ L + V+ I+ L S+ SW+++++ + R + +F++LFW+G ++
Sbjct: 5 ISLVELVLHANFIVQLIMLALVAMSVYSWAIMLEVNNRVKKYRNEQVQFDKLFWAGHHIQ 64
Query: 71 TVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ H G + IF S + E+ D I + ++R + +AIA+E +E+
Sbjct: 65 KLYDYYLQHKENIFGKSIIFCSGLREFNNLKDTCMLRGDTILEGMERTVSIAIAQEAKEL 124
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP 173
KL L ++ + +G++G V G+M F ++ G + +
Sbjct: 125 DRKLPALATIGAVAPYIGLVGTVWGIMSSFNTLGGVEQATISVVA 169
>gi|86160450|ref|YP_467235.1| MotA/TolQ/ExbB proton channel [Anaeromyxobacter dehalogenans 2CP-C]
gi|85776961|gb|ABC83798.1| MotA/TolQ/ExbB proton channel [Anaeromyxobacter dehalogenans 2CP-C]
Length = 233
Score = 136 bits (342), Expect = 3e-30, Method: Composition-based stats.
Identities = 40/223 (17%), Positives = 88/223 (39%), Gaps = 9/223 (4%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG-- 66
MD S+ + + ++ S+++ +V I++ + + +
Sbjct: 1 MDTSLVGIMKTGS----ASMWIIVACSVIALAVAIERGIALWGFTARAKSLADAVTRALY 56
Query: 67 -QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
LE + A +F++ + G R+P ++I ++ +
Sbjct: 57 RGDLEDGRAQCE-RSGSPAADVFLAGLVAVAPRPGPGGRTPAPTAEKITAAVERERQQVN 115
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-VVSIPGIIESLISILL 184
++ L LG++ + VG+ G V+G+M F+ +A V GI E+L++
Sbjct: 116 LKLRRNLWILGTVGATAPFVGLFGTVVGIMHAFRQMAATGQGGFTVVAAGISEALVTTAG 175
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEG 227
G+ V+I + + +N +K A+Q+ E+ I+ G
Sbjct: 176 GIAVAIEAVVIFNFLNVHVQKLALQLRLLTEEYLEIVKEVLAG 218
>gi|321443981|gb|EFX60255.1| hypothetical protein DAPPUDRAFT_344393 [Daphnia pulex]
Length = 194
Score = 135 bits (341), Expect = 4e-30, Method: Composition-based stats.
Identities = 24/141 (17%), Positives = 65/141 (46%), Gaps = 3/141 (2%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
MD+S++ ++ + VK ++ L + SI++W+++ K +R+ R + + ++
Sbjct: 56 MDLSVWGMYQHADIVVKIVMIGLVLASIVTWTILFSKGSELFRAKRRLRREQLALANVRT 115
Query: 69 LETVCKSLKNHHNIGLAAIFM-SAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
L+ + ++ ++ + + A +E + S + GI++R ++ +A
Sbjct: 116 LDEASELAQHFSEESISVVLLNDAQNELELSAESN--DNNGIKERTGFRLERRVAGYSRN 173
Query: 128 ITEKLSFLGSMSSAGLLVGIL 148
+ FL ++ + VG+
Sbjct: 174 MGRGNGFLATIGAISPFVGLF 194
>gi|254420281|ref|ZP_05034005.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Brevundimonas sp. BAL3]
gi|196186458|gb|EDX81434.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Brevundimonas sp. BAL3]
Length = 576
Score = 135 bits (340), Expect = 5e-30, Method: Composition-based stats.
Identities = 51/214 (23%), Positives = 87/214 (40%), Gaps = 12/214 (5%)
Query: 16 LFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKS 75
LF + + +I +L + +L+ V+I K V R +F +
Sbjct: 344 LFKALTVDAWVVIVILGLMLVLAVWVMITKGVMLGRTTRANEDFLDAYRQSARASNGHDG 403
Query: 76 LKN-----HHNIGLAAIFMSAMSEWKKSCDKG--ARSPIGIQ----DRIDRMMDVAIARE 124
L + N LA ++ E +G A S I+ I +D RE
Sbjct: 404 LGDLPGDLARNSPLARLYRIGQRELGLRLQEGRAAGSRFAIRPQSIAAIRSALDAGQVRE 463
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISIL 183
+++ + + L S G +G+LG VLG+M F S+A N+ PGI +L++ +
Sbjct: 464 SQKLNKWMVLLTIAISGGPFIGLLGTVLGVMITFASVAAAGEVNINAIAPGIAAALLATV 523
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEF 217
GL V+IP+ YN + + + F +E
Sbjct: 524 AGLAVAIPALFGYNYLLSRVEDVTADNQIFVDEL 557
>gi|85858717|ref|YP_460919.1| tolQ protein [Syntrophus aciditrophicus SB]
gi|85721808|gb|ABC76751.1| tolQ protein [Syntrophus aciditrophicus SB]
Length = 248
Score = 135 bits (340), Expect = 5e-30, Method: Composition-based stats.
Identities = 52/198 (26%), Positives = 90/198 (45%), Gaps = 13/198 (6%)
Query: 39 WSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSE---- 94
W++I+ K + + + F + +L V K + + LA +F S +E
Sbjct: 46 WAIIVTKYRSIRKVNAENSLFLDAYMKCSNLADVLPEAKKYSSSTLAGVFRSGYAELVNF 105
Query: 95 --------WKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVG 146
++ D I D ++R ++ A + E ++ L FL + SA +G
Sbjct: 106 AKATQGASFRDRDDAVPSPEIKGLDNVERALNRACSAEATKLEAALGFLATTGSASPFIG 165
Query: 147 ILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKK 205
+ G V G+M F+ I S + V PGI E+LI+ GL +IP+ I YN ++ K
Sbjct: 166 LFGTVWGIMDTFRGIGFQGSATLAVVAPGISEALIATAAGLAAAIPAVIFYNYYLNRVKL 225
Query: 206 FAMQMEGFANEFSAILSR 223
++M+ FA+E I+ R
Sbjct: 226 MTLEMDHFASELINIVER 243
>gi|167841252|ref|ZP_02467936.1| MotA/TolQ/ExbB proton channel [Burkholderia thailandensis MSMB43]
Length = 299
Score = 135 bits (340), Expect = 6e-30, Method: Composition-based stats.
Identities = 54/211 (25%), Positives = 94/211 (44%), Gaps = 11/211 (5%)
Query: 24 VKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFW--SGQSL------ETVCKS 75
+IT+L + +SW V+ K+ + R F Q F +G+ L +
Sbjct: 77 AWVVITVLLAMAAISWFVMWTKARYVGAVDRANGYFVQRFREVAGRHLVGLAHVDARSDE 136
Query: 76 LKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQ--DRIDRMMDVAIARELEEITEKLS 133
+ L ++ + + E D R+ I + + I MD + RE + +++ +
Sbjct: 137 GRRLAQSSLYRLYRAGVDEIHSRVDDNGRTVITTESIEAIRASMDATLVRENQRLSKSMV 196
Query: 134 FLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPS 192
L S G +G+LG V+G+M F +IA NV PGI +L++ + GL V+IP+
Sbjct: 197 LLTIAISGGPFLGLLGTVVGVMITFAAIAAAGDVNVNAIAPGIAAALLATVTGLFVAIPA 256
Query: 193 SIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
YN + +K M+ F +EF L+
Sbjct: 257 LFGYNYLLIRNKNVTANMQVFVDEFVTRLAE 287
>gi|153003741|ref|YP_001378066.1| MotA/TolQ/ExbB proton channel [Anaeromyxobacter sp. Fw109-5]
gi|152027314|gb|ABS25082.1| MotA/TolQ/ExbB proton channel [Anaeromyxobacter sp. Fw109-5]
Length = 240
Score = 135 bits (340), Expect = 6e-30, Method: Composition-based stats.
Identities = 56/219 (25%), Positives = 101/219 (46%), Gaps = 18/219 (8%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
M S+F LF + G + ++ LL S+ S +VI++++V F RR + L G+
Sbjct: 1 MTKSLFELFTRAG--AEWVMLLLVGLSVASVAVILERTVYFARRRRACPDLLALLRDGR- 57
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
LE ++ H GL A A + D P +Q+ + AIA
Sbjct: 58 LEEARGRVE--HQRGLEAEVARA------ALDAADGGPAAVQEAVA----CAIAERRLAY 105
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVS---IPGIIESLISILLG 185
LSFLG++ + +G+ G V+G++ F +A + + + GI E+L++ +G
Sbjct: 106 ERGLSFLGTLGNNAPFLGLFGTVVGIIRAFSDLAVGAAQGAGASAVMSGISEALVATAVG 165
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+ V+IP+ +A+N F + + E + ++ L R
Sbjct: 166 IFVAIPAVVAFNGFQRWLRSLVTRAEAVGHALASHLERD 204
>gi|162448919|ref|YP_001611286.1| putative transport transmembrane protein, tolQ [Sorangium
cellulosum 'So ce 56']
gi|161159501|emb|CAN90806.1| putative transport transmembrane protein, tolQ [Sorangium
cellulosum 'So ce 56']
Length = 246
Score = 134 bits (338), Expect = 8e-30, Method: Composition-based stats.
Identities = 50/218 (22%), Positives = 87/218 (39%), Gaps = 13/218 (5%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+ +L + V ++ LL +IL W + + K + L FEQ S +
Sbjct: 18 LDPVSLVLHASGPVFLVVWLLIFAAILVWVIAVLKVLQLARLASLQARFEQESAHAHSPD 77
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
+ + H + A + M +G +D + AI E + +
Sbjct: 78 QLFALAQRHADAPGARVVME------------LSRRVGTSRLLDSIAKRAIVTETQRASA 125
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVS 189
+ L S+++A +G+ G V G+M F I S ++ V P I E+LI+ +GL +
Sbjct: 126 LMPTLSSIAAASPFIGLFGTVYGIMDAFLRIGQQKSASLPVVAPAIGEALIATAIGLFAA 185
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEG 227
IP+ IAYN + +E + + I S G
Sbjct: 186 IPAVIAYNGINKRVDDLLAALEAASEGWVEIASLSARG 223
>gi|167646068|ref|YP_001683731.1| MotA/TolQ/ExbB proton channel [Caulobacter sp. K31]
gi|167348498|gb|ABZ71233.1| MotA/TolQ/ExbB proton channel [Caulobacter sp. K31]
Length = 585
Score = 134 bits (338), Expect = 9e-30, Method: Composition-based stats.
Identities = 57/220 (25%), Positives = 95/220 (43%), Gaps = 12/220 (5%)
Query: 21 GLAVKCI-------ITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFW-SGQSLETV 72
G+ VK + I +L + + S+ VI KS+ ++ F +LF G +
Sbjct: 359 GVIVKSVTVDAWVIIGILGVMAAASFWVIWSKSMYVGSVDAANERFVKLFREQGDDFLAL 418
Query: 73 CKSLKNH--HNIGLAAIFMSAMSEW-KKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+ + + I+ + E ++ GA I +MD + RE + ++
Sbjct: 419 ARGGEPRGVAQSSIYRIYRAGGDEITRRHLASGAMLRAEAIQVIRALMDATLVRENQRLS 478
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCV 188
+ L L S G +G+LG V+G+M F +IA NV PGI +L++ + GL V
Sbjct: 479 KSLVVLTIAISGGPFLGLLGTVVGVMITFAAIAAAGDVNVNAIAPGISAALLATVAGLGV 538
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
+IPS YN + +K M F +EF S + G
Sbjct: 539 AIPSLFGYNYILTRNKAVQANMIVFVDEFITRASERYSGE 578
>gi|197124531|ref|YP_002136482.1| MotA/TolQ/ExbB proton channel [Anaeromyxobacter sp. K]
gi|220919256|ref|YP_002494560.1| MotA/TolQ/ExbB proton channel [Anaeromyxobacter dehalogenans 2CP-1]
gi|196174380|gb|ACG75353.1| MotA/TolQ/ExbB proton channel [Anaeromyxobacter sp. K]
gi|219957110|gb|ACL67494.1| MotA/TolQ/ExbB proton channel [Anaeromyxobacter dehalogenans 2CP-1]
Length = 233
Score = 134 bits (337), Expect = 1e-29, Method: Composition-based stats.
Identities = 40/223 (17%), Positives = 88/223 (39%), Gaps = 9/223 (4%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG-- 66
MD S+ + + ++ S+++ +V I++ + + +
Sbjct: 1 MDTSLVGIMKTGS----ASMWIIVACSVIALAVAIERGIALWGFTARAKSLADAVTRALY 56
Query: 67 -QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
LE + A +F++ + G R+P ++I ++ +
Sbjct: 57 RGDLEDGRAQCE-RSGSPAADVFLAGLVAVAPRPGPGGRAPAPTAEKIAAAVERERQQVN 115
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-VVSIPGIIESLISILL 184
++ L LG++ + VG+ G V+G+M F+ +A V GI E+L++
Sbjct: 116 LKLRRNLWILGTVGATAPFVGLFGTVVGIMHAFRQMAATGQGGFTVVAAGISEALVTTAG 175
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEG 227
G+ V+I + + +N +K A+Q+ E+ I+ G
Sbjct: 176 GIAVAIEAVVIFNFLNVHVQKLALQLRLLTEEYLEIVKEVLAG 218
>gi|90424416|ref|YP_532786.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris BisB18]
gi|90106430|gb|ABD88467.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris BisB18]
Length = 680
Score = 133 bits (336), Expect = 1e-29, Method: Composition-based stats.
Identities = 54/221 (24%), Positives = 89/221 (40%), Gaps = 22/221 (9%)
Query: 25 KCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFW------------SGQSLETV 72
+I +L I + LSW V++ + R F + F + T+
Sbjct: 441 WVVIGILAIMAALSWVVMVDRVSYLNKQTRANARFAKSFREVSSDLTMLDRGDADEIATL 500
Query: 73 CKSLKNH-----HNIGLAAIFMSAMSEWK-KSCDKGARSPI---GIQDRIDRMMDVAIAR 123
L L I+ E + + G R+PI I +D +
Sbjct: 501 GGRLSEDDATMMRASSLYRIYHIGALEIRGRFAGNGTRAPILSATSIAAIRATLDSGYVK 560
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISI 182
E++++ + L S G +G+LG V+G+M F +IA NV PGI +L++
Sbjct: 561 EMQKLNRLMVVLTIAISGGPFLGLLGTVVGVMITFAAIAASGDVNVNAIAPGIAAALVAT 620
Query: 183 LLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
+ GL V+IP+ AYN I K M+ F +EF ++
Sbjct: 621 VAGLGVAIPALFAYNYLISRIKDLTTDMQVFVDEFVTRMAE 661
>gi|213416756|ref|ZP_03349900.1| biopolymer transport protein ExbB [Salmonella enterica subsp.
enterica serovar Typhi str. E01-6750]
Length = 183
Score = 133 bits (336), Expect = 2e-29, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 4/170 (2%)
Query: 63 FWSGQSLETVCKSLKNHHNIGL-AAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
+SL+ L A + A +E + S +G+ GI++R ++ +
Sbjct: 1 LADARSLDQASDIAAGFSAKSLSAQLINEAQNELELS--QGSEDNEGIKERTGFRLERRV 58
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLI 180
A + +L ++ + VG+ G V G+M F IA + N+ V PGI E+L+
Sbjct: 59 AAVGRYMGRGNGYLATIGAISPFVGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGIAEALL 118
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
+ +GL +IP+ + YN F + + A + + SR + N S
Sbjct: 119 ATAIGLVAAIPAVVIYNIFARQIGSYKATLGDVAAQVLLLQSRDLDLNAS 168
>gi|145219972|ref|YP_001130681.1| MotA/TolQ/ExbB proton channel [Prosthecochloris vibrioformis DSM
265]
gi|145206136|gb|ABP37179.1| Cell division and transport-associated protein TolQ [Chlorobium
phaeovibrioides DSM 265]
Length = 220
Score = 133 bits (336), Expect = 2e-29, Method: Composition-based stats.
Identities = 57/222 (25%), Positives = 103/222 (46%), Gaps = 4/222 (1%)
Query: 6 LAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS 65
++ I I L Q G V ++ +L +FS+ SW++I+ K + + + F F+
Sbjct: 1 MSDSQIGIIDLLFQAGPVVLFVLVVLLLFSVGSWAIILYKFGAVRSSMNESKAFLDCFFE 60
Query: 66 GQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
S + + + N L+ +F +A E + + RI R + E
Sbjct: 61 SGSADRIFSESEKFRNGSLSKVFRAAYIENRAVAASPGAVDDRL--RIARAVKREANLEA 118
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILL 184
+ ++ + FL ++ + +G+ G V G+M FQ+I S ++ V PGI E+L++
Sbjct: 119 KRLSSLVPFLATVGNTAPFIGLFGTVWGIMSAFQNIGLVQSASLAVVAPGISEALVATAA 178
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAI-LSRQT 225
GL +IP+ + YN F + +E FA EF A+ L Q+
Sbjct: 179 GLAAAIPAVMGYNYFSQQIGIIERDLEEFAPEFVAVCLHNQS 220
>gi|162452529|ref|YP_001614896.1| TolQ protein [Sorangium cellulosum 'So ce 56']
gi|161163111|emb|CAN94416.1| TolQ protein [Sorangium cellulosum 'So ce 56']
Length = 238
Score = 133 bits (335), Expect = 2e-29, Method: Composition-based stats.
Identities = 53/231 (22%), Positives = 103/231 (44%), Gaps = 9/231 (3%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLF---WS 65
M ++ L+ MGL K I+ L I S+ S V+ ++ V R R F +
Sbjct: 1 MQFTLTELWGHMGLFAKLIVFALAIMSVASLIVLGERLVVSFLSRAASRAFAARVGPMLA 60
Query: 66 GQSLETVCKSLKNHHNIG-LAAIFMSAMSEWKKSCD----KGARSPIGIQDRIDRMMDVA 120
LE + + G L + + ++ + S G+ + + R ++
Sbjct: 61 RGELEGAWTAARPGGESGYLGRVIGAGLAAYASSAPSRLPAQGHERDGVFESVSRALERQ 120
Query: 121 IARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESL 179
RE+ + L ++ S VG+LG V+G++ FQ +A S + ++ GI E+L
Sbjct: 121 AQREVLSLKRGYGLLATVGSTAPFVGLLGTVMGIVTAFQQMAASGSGGLGTVSAGIAEAL 180
Query: 180 ISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
I+ GL V+IP+ + YN + A+ + +NE +++++ +G ++
Sbjct: 181 ITTAFGLIVAIPAVMGYNYLQGWVEARAIDISESSNELLDVVAKRLDGRLA 231
>gi|77166131|ref|YP_344656.1| MotA/TolQ/ExbB proton channel [Nitrosococcus oceani ATCC 19707]
gi|254435037|ref|ZP_05048544.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Nitrosococcus oceani AFC27]
gi|76884445|gb|ABA59126.1| MotA/TolQ/ExbB proton channel [Nitrosococcus oceani ATCC 19707]
gi|207088148|gb|EDZ65420.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Nitrosococcus oceani AFC27]
Length = 253
Score = 132 bits (333), Expect = 3e-29, Method: Composition-based stats.
Identities = 44/222 (19%), Positives = 86/222 (38%), Gaps = 18/222 (8%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLET 71
++ + G + + SI++ +II++ R + W Q
Sbjct: 20 TVLEIIKAGGWL----MLPILACSIVAIGIIIERFWFLRRQRVVPKHIASQIWQWQYRNQ 75
Query: 72 VCKSL--KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+ K + L I + ++ +S + + ++ E+
Sbjct: 76 LDKIHIKSVRESSPLGRILAAGLANRNRSR-----------EIMKESIEDVGRHVTLELE 124
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYY-SNNVVSIPGIIESLISILLGLCV 188
L+ LG++++ L+G+LG V+GM+ F I N V GI E+LI+ GL V
Sbjct: 125 RFLNTLGTIAAITPLLGLLGTVIGMIKVFTVITAQGVDNPAVLAGGISEALITTAAGLAV 184
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
+IPS + Y F + + ME A + ++ E + +
Sbjct: 185 AIPSLMFYRYFHGRVMRLVVDMEEQAIKLVEVMHGDRELDPT 226
>gi|226227351|ref|YP_002761457.1| putative biopolymer transport protein [Gemmatimonas aurantiaca
T-27]
gi|226090542|dbj|BAH38987.1| putative biopolymer transport protein [Gemmatimonas aurantiaca
T-27]
Length = 233
Score = 132 bits (332), Expect = 4e-29, Method: Composition-based stats.
Identities = 57/228 (25%), Positives = 103/228 (45%), Gaps = 8/228 (3%)
Query: 5 GLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFW 64
G A S+ +L + K ++ LL + S+ SW ++ K F R F F
Sbjct: 3 GEAPGSSSLISLVITSDPVTKFVLGLLAVLSLASWGIMFAKWRAFSAAEANGRSFVHEFE 62
Query: 65 SGQSLETVCKSLKNHHNIGLAAIFMSAMS-------EWKKSCDKGARSPIGIQDRIDRMM 117
+ ++ + + A+F A+ + D+ AR + + ++
Sbjct: 63 RARGIDDAMLLAQRVKSSAFTAVFSRAVQFLHDTKPALGATSDRTARLSGSQVEALRLVL 122
Query: 118 DVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGII 176
D +E EE+ + +L ++ S L+G+ G VLG++ F+ IA S N+ PGI
Sbjct: 123 DAESGKEREELGRFIPWLATVGSVSPLIGLFGTVLGVIEAFEGIATKGSGNIGAVAPGIA 182
Query: 177 ESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+L++ L V+IP++ AYN F +F +EGF +E A++ R+
Sbjct: 183 TALLATAAALAVAIPAAFAYNVFASRLNRFDNSLEGFGSELIALMVRE 230
>gi|257092031|ref|YP_003165672.1| MotA/TolQ/ExbB proton channel [Candidatus Accumulibacter phosphatis
clade IIA str. UW-1]
gi|257044555|gb|ACV33743.1| MotA/TolQ/ExbB proton channel [Candidatus Accumulibacter phosphatis
clade IIA str. UW-1]
Length = 219
Score = 132 bits (332), Expect = 5e-29, Method: Composition-based stats.
Identities = 43/219 (19%), Positives = 92/219 (42%), Gaps = 21/219 (9%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLR----RQFREFEQLFWSGQ 67
++F++ G I L + SI++ ++II++ V + + +
Sbjct: 17 NVFSIVQAAGWP----IWPLLLASIIAVALIIERLVALRRAKVVPPGLLQRAVAEYRKNG 72
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + +L+ +G + G R+ ++ + ++ A + +
Sbjct: 73 TTPDLIANLEADSPLG-------------RVLGAGLRNVAASREIMKEAIEEAGSVVSHD 119
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLC 187
+ L+ LG+++S L+G+ G V+GM+ F S A SN + GI +L + GL
Sbjct: 120 LERYLTTLGTIASISPLMGLFGTVVGMIEIFGSQAPSGSNPIQLAHGISVALYNTGFGLL 179
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
++IPS I + F F ++M+ A +L + +
Sbjct: 180 IAIPSMIFWRHFRALVDSFVIEMQQQAVRLVEVLHGERK 218
>gi|304413880|ref|ZP_07395297.1| membrane spanning protein in TolA-TolQ-TolR complex [Candidatus
Regiella insecticola LSR1]
gi|304283600|gb|EFL91995.1| membrane spanning protein in TolA-TolQ-TolR complex [Candidatus
Regiella insecticola LSR1]
Length = 117
Score = 131 bits (331), Expect = 6e-29, Method: Composition-based stats.
Identities = 38/114 (33%), Positives = 61/114 (53%), Gaps = 1/114 (0%)
Query: 117 MDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGI 175
M +A+ RELE + + FLG++ S +G+ G V G+M F ++ + + PGI
Sbjct: 1 MRIAMNRELEMLETHIPFLGTVGSISPYIGLFGTVWGIMNAFIALGAAKQATLQMVAPGI 60
Query: 176 IESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNI 229
E+LI+ +GL +IP+ +AYN+ K + F EF+AIL RQ +
Sbjct: 61 AEALIATAIGLFAAIPAVMAYNRLNLRVNKLEQNYDNFMEEFTAILHRQVFARV 114
>gi|94309482|ref|YP_582692.1| MotA/TolQ/ExbB proton channel [Cupriavidus metallidurans CH34]
gi|93353334|gb|ABF07423.1| biopolymer transport channel protein [Cupriavidus metallidurans
CH34]
Length = 206
Score = 131 bits (331), Expect = 6e-29, Method: Composition-based stats.
Identities = 40/213 (18%), Positives = 89/213 (41%), Gaps = 17/213 (7%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLR----RQFREFEQLFWSGQS 68
+F++ G I L + S+++ ++I+++ ++ + + + E ++
Sbjct: 1 MFSIIQAAGWP----IWPLLLASVIALALIVERFISLKRSKILPPKLYEEALSAAQQRRA 56
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
V +L+ N L + + + + + + R++ E+
Sbjct: 57 TPEVVNNLEQ--NSPLGRVLAAGLRHVVLQPQTSRDAAKDVVEEAGRVV-------AHEL 107
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCV 188
L+ LG+++S L+G+LG V+GM+ F + G +N GI +L + GL V
Sbjct: 108 ERYLNALGTIASVAPLMGLLGTVIGMIEIFGNQGGTGANPEQLAHGISVALYNTAFGLIV 167
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+IP+ I + F + ++E A F +
Sbjct: 168 AIPALIFWRYFRRRVDDYVAELEFRATSFLDAI 200
>gi|115525465|ref|YP_782376.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris BisA53]
gi|115519412|gb|ABJ07396.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris BisA53]
Length = 687
Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats.
Identities = 49/218 (22%), Positives = 81/218 (37%), Gaps = 23/218 (10%)
Query: 25 KCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS----LETVC------- 73
II +L I + +SW V+ ++ + F + F S L+T
Sbjct: 447 WVIIGILMIMAAISWVVMYDRASYLNRQSKANSTFLKGFREAASDLMALDTAVGGGDASS 506
Query: 74 -------KSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQ----DRIDRMMDVAIA 122
+ K L I+ + + + I +D
Sbjct: 507 HRLGLGEEDAKLMRASSLYRIYHIGAEQIRARFAGNGNRATALSGITIAAIRASLDSGYV 566
Query: 123 RELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLIS 181
+E + + + L S G +G+LG V+G+M F +IA NV PGI +L++
Sbjct: 567 KETQRLNRLMVLLTIAISGGPFLGLLGTVVGVMITFAAIAQSGDVNVNAIAPGIAAALVA 626
Query: 182 ILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
+ GL V+IP+ YN I K M+ F +EF
Sbjct: 627 TVAGLFVAIPALFGYNYLISRIKDLTSDMQVFIDEFVT 664
>gi|330947267|gb|EGH47979.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. pisi str.
1704B]
Length = 145
Score = 129 bits (326), Expect = 2e-28, Method: Composition-based stats.
Identities = 32/148 (21%), Positives = 62/148 (41%), Gaps = 3/148 (2%)
Query: 20 MGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNH 79
+ VK ++ L I SI++W++ I K + +R+ R +SL +
Sbjct: 1 ADVVVKAVMIGLAIASIITWTIWISKGFELLGAKRRLRGEIANLKKARSLSEASATASTE 60
Query: 80 HNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMS 139
+ + A+ E + S +R GI++R+ ++ +A ++ L ++
Sbjct: 61 GTLA-HLLVHDALEEMRLSA--NSREREGIKERVSFRLERLVAACGRNMSMGTGVLATIG 117
Query: 140 SAGLLVGILGAVLGMMGFFQSIAGYYSN 167
S VG+ G V G+M F IA +
Sbjct: 118 STAPFVGLFGTVWGIMNSFIGIAKTQTT 145
>gi|319640601|ref|ZP_07995320.1| biopolymer transporter ExbB [Bacteroides sp. 3_1_40A]
gi|317387771|gb|EFV68631.1| biopolymer transporter ExbB [Bacteroides sp. 3_1_40A]
Length = 237
Score = 129 bits (326), Expect = 2e-28, Method: Composition-based stats.
Identities = 35/220 (15%), Positives = 89/220 (40%), Gaps = 19/220 (8%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
++++ + M+ G I+ +L + S++ + + ++ + F +
Sbjct: 32 MNLWDMAMKGGW----IMLVLALLSVVCFYIFFERMAVIRKAGKDDPLFMERIRDYIRTG 87
Query: 71 TVCKSLK--NHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ ++ N A + ++ + + ++ + E+ ++
Sbjct: 88 EIKSAINYCRITNTPSARMIEKGITRMGRPVAD-----------VQAAIENSGNIEVAKL 136
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI--PGIIESLISILLGL 186
L + +++ ++G LG V GM+ F ++ +N +++ GI E++I+ + GL
Sbjct: 137 ENGLPVVATIAGGAPMIGFLGTVTGMVQAFWEMSNAGNNIDITLLSGGIYEAMITTVGGL 196
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
V I + AYN + K QME +F +L+ +
Sbjct: 197 VVGIAAMFAYNYLVTRVDKVVSQMEARTMDFMDLLNEPVQ 236
>gi|262038091|ref|ZP_06011496.1| biopolymer transport ExbB protein [Leptotrichia goodfellowii F0264]
gi|261747911|gb|EEY35345.1| biopolymer transport ExbB protein [Leptotrichia goodfellowii F0264]
Length = 211
Score = 129 bits (325), Expect = 3e-28, Method: Composition-based stats.
Identities = 41/216 (18%), Positives = 97/216 (44%), Gaps = 15/216 (6%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKS-VNFITLRRQFREFEQLFWSGQSLET 71
+ F+ G+ + + + SI +VI++K+ + ++ EF++ + ++L+
Sbjct: 1 MLHYFIAGGIF----MWGILLASICGLAVILEKAALFLTKEKKLTEEFKRKLY--KTLKK 54
Query: 72 VCKS----LKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
K L + ++ I + ++ + DK S + ++ ++ I + +
Sbjct: 55 GNKKEILDLCSERKDSVSQILVKTVNNMEIDLDKADHSH---KQYVEEIITENILEQTMK 111
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
+ + + LG++ + +G+LG V GM+ F +++ + + GI E+L + GL
Sbjct: 112 LEKGMWLLGAVVNTAPQLGLLGTVTGMIVSFSALSTNNTESARAVASGISEALYTTAFGL 171
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
V+IP + YN F + ++ME + +F
Sbjct: 172 MVAIPFLVFYNYFNKKIDDTVLEMERVSLQFLNRFQ 207
>gi|150003064|ref|YP_001297808.1| putative biopolymer transport protein ExbB [Bacteroides vulgatus
ATCC 8482]
gi|254882347|ref|ZP_05255057.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
gi|294775908|ref|ZP_06741407.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Bacteroides vulgatus PC510]
gi|149931488|gb|ABR38186.1| putative biopolymer transport protein ExbB [Bacteroides vulgatus
ATCC 8482]
gi|254835140|gb|EET15449.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
gi|294450277|gb|EFG18778.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Bacteroides vulgatus PC510]
Length = 238
Score = 129 bits (325), Expect = 3e-28, Method: Composition-based stats.
Identities = 35/220 (15%), Positives = 89/220 (40%), Gaps = 19/220 (8%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
++++ + M+ G I+ +L + S++ + + ++ + F +
Sbjct: 33 MNLWDMAMKGGW----IMLVLALLSVVCFYIFFERMAVIRKAGKDDPLFMERIRDYIRTG 88
Query: 71 TVCKSLK--NHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ ++ N A + ++ + + ++ + E+ ++
Sbjct: 89 EIKSAINYCRITNTPSARMIEKGITRMGRPVAD-----------VQAAIENSGNIEVAKL 137
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI--PGIIESLISILLGL 186
L + +++ ++G LG V GM+ F ++ +N +++ GI E++I+ + GL
Sbjct: 138 ENGLPVVATIAGGAPMIGFLGTVTGMVQAFWEMSNAGNNIDITLLSGGIYEAMITTVGGL 197
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
V I + AYN + K QME +F +L+ +
Sbjct: 198 VVGIAAMFAYNYLVTRVDKVVSQMEARTMDFMDLLNEPVQ 237
>gi|113866635|ref|YP_725124.1| biopolymer transport channel protein [Ralstonia eutropha H16]
gi|113525411|emb|CAJ91756.1| biopolymer transport channel protein [Ralstonia eutropha H16]
Length = 239
Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats.
Identities = 46/226 (20%), Positives = 94/226 (41%), Gaps = 17/226 (7%)
Query: 6 LAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLR----RQFREFEQ 61
L+I + +F++ G I L + S+++ ++I+++ + R R + E
Sbjct: 27 LSIPGVQLFSIIQAAGWP----IWPLLLASVIALALIVERFLTLKRSRVLPARLYEEALA 82
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
++ V +L+ N L + + + + + S +D ++ V
Sbjct: 83 AAQQRRATPEVVNTLEQ--NSPLGRVLAAGL---RHVVLQPHTSRDAAKDVVEEAGRVVA 137
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLIS 181
+ L+ LG+++S L+G+LG V+GM+ F S G ++ GI +L +
Sbjct: 138 HE----LERYLNALGTIASVAPLMGLLGTVIGMIEIFGSQGGTGASPEQLAHGISVALYN 193
Query: 182 ILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEG 227
GL V+IP+ I + F + ++E A F + Q
Sbjct: 194 TAFGLIVAIPALIFWRYFRRRVDDYVAELEFRATSFLDAILPQRRA 239
>gi|296445264|ref|ZP_06887223.1| MotA/TolQ/ExbB proton channel [Methylosinus trichosporium OB3b]
gi|296257219|gb|EFH04287.1| MotA/TolQ/ExbB proton channel [Methylosinus trichosporium OB3b]
Length = 626
Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats.
Identities = 50/231 (21%), Positives = 91/231 (39%), Gaps = 25/231 (10%)
Query: 25 KCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS-GQSLETV----------- 72
+I LL I + +SW V+I ++ + +F + F L ++
Sbjct: 389 WIVIGLLMIMAAVSWMVMIDRTSYVNRQSKANEQFIKSFRDMATDLTSLDHGDAEDIASI 448
Query: 73 -----CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQ----DRIDRMMDVAIAR 123
+ L I+ SE P + I +D + +
Sbjct: 449 GGRVGESEAEMMRVSALYRIYHIGASEISHRFAAAGGRPTALSGASIAAIRAALDSGVVK 508
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISI 182
E +++ + L S G +G+LG V+G+M F +IA NV PGI +L++
Sbjct: 509 ETQQLNRMMVVLTIAISGGPFLGLLGTVVGVMITFAAIAASGDVNVNAIAPGIAAALVAT 568
Query: 183 LLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR---QTEGNIS 230
+ GL V+IP+ YN I K ++ F +EF ++ + G+++
Sbjct: 569 VAGLAVAIPALFGYNYLISRIKDLTSEIHVFVDEFVTKMAEAYSERRGDVA 619
>gi|224826272|ref|ZP_03699374.1| MotA/TolQ/ExbB proton channel [Lutiella nitroferrum 2002]
gi|224601373|gb|EEG07554.1| MotA/TolQ/ExbB proton channel [Lutiella nitroferrum 2002]
Length = 209
Score = 129 bits (324), Expect = 4e-28, Method: Composition-based stats.
Identities = 40/220 (18%), Positives = 90/220 (40%), Gaps = 21/220 (9%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITL----RRQFREFEQLFWSG 66
+ + ++ G + I + S++S ++I ++ + + + Q +
Sbjct: 1 MPVGSIIEAAGWPIWAI----IVASVISLTIIFERFFSLRQSLVAPQGLLGQTLQEYRRA 56
Query: 67 QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
+ + + + L H L +F + + R+ ++ + ++
Sbjct: 57 GATQELLQLLGQH--SPLGRLFAAGL-----------RNADASREVMKESIEDEGRLVAH 103
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGL 186
++ L+ LG++++ L+G+LG V+GM+ F S A +N GI +L + GL
Sbjct: 104 QLERYLTTLGTIAAMAPLLGLLGTVIGMIEIFGSQAPSGTNPTELAHGISVALYNTAFGL 163
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
V+IPS + Y F + ME A + +L + +
Sbjct: 164 IVAIPSMMFYRHFRAQVDALLVDMESQAVKLVEVLHGERK 203
>gi|293608262|ref|ZP_06690565.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292828835|gb|EFF87197.1| conserved hypothetical protein [Acinetobacter sp. SH024]
Length = 211
Score = 128 bits (323), Expect = 5e-28, Method: Composition-based stats.
Identities = 50/213 (23%), Positives = 103/213 (48%), Gaps = 21/213 (9%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
++ L G + L + SIL+ ++ I++ V + + S E +
Sbjct: 1 MWELVRAGGWL----MLPLILCSILTVAISIERFVRLRRSQVLPKALIDD--SSLRTEDI 54
Query: 73 CKSLKNH---HNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
++L+ + N LA I + ++ ++ AR+ M+VA ++E+ +
Sbjct: 55 VENLEQNVEVQNSALAHILKAGFD-HREHGEQFARAQ----------MEVAASQEISYLE 103
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA-GYYSNNVVSIPGIIESLISILLGLCV 188
+ ++FLG++S+ L+G+LG V+G++ F I G + + IPGI ++LI+ +G+ +
Sbjct: 104 KNINFLGTLSAVAPLLGLLGTVVGIIESFLVIDFGSAGSPSLMIPGISKALITTAVGMLI 163
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+IP+ +AY F + + +E + F A L
Sbjct: 164 AIPALVAYRYFQRLVQDYITDLEQQSTLFHASL 196
>gi|194288710|ref|YP_002004617.1| biopolymer transport transmembrane protein [Cupriavidus taiwanensis
LMG 19424]
gi|193222545|emb|CAQ68548.1| BIOPOLYMER TRANSPORT TRANSMEMBRANE PROTEIN [Cupriavidus taiwanensis
LMG 19424]
Length = 206
Score = 128 bits (323), Expect = 5e-28, Method: Composition-based stats.
Identities = 42/219 (19%), Positives = 91/219 (41%), Gaps = 17/219 (7%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLR----RQFREFEQLFWSGQS 68
+F++ G I L + S+++ ++I+++ ++ + R + E ++
Sbjct: 1 MFSIIQAAGWP----IWPLLLASVIALALIVERFLSLKRSKVLPARLYEEALAAAQQRRA 56
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
V +L+ N L + + + + + S +D ++ V +
Sbjct: 57 TPEVVNTLEQ--NSPLGRVLAAGL---RHVVLQPHTSRDAAKDVVEEAGRVVAHE----L 107
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCV 188
L+ LG+++S L+G+LG V+GM+ F + G ++ GI +L + GL V
Sbjct: 108 ERYLNALGTIASVAPLMGLLGTVIGMIEIFGNQGGTGTSPEQLAHGISVALYNTAFGLIV 167
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEG 227
+IP+ I + F + ++E A F + Q
Sbjct: 168 AIPALIFWRYFRRRVDDYVAELEFRATSFLDAILPQRRA 206
>gi|262278905|ref|ZP_06056690.1| MotA/TolQ/ExbB proton channel family protein [Acinetobacter
calcoaceticus RUH2202]
gi|262259256|gb|EEY77989.1| MotA/TolQ/ExbB proton channel family protein [Acinetobacter
calcoaceticus RUH2202]
Length = 211
Score = 128 bits (323), Expect = 6e-28, Method: Composition-based stats.
Identities = 52/215 (24%), Positives = 107/215 (49%), Gaps = 25/215 (11%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL--E 70
++ L G + L + SIL+ ++ I++ V R+ + + SL E
Sbjct: 1 MWELVRAGGWL----MLPLILCSILTVAISIERFVRL----RRSQVLPEALSGKGSLRAE 52
Query: 71 TVCKSLKNH---HNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ ++L+ + + L I + E ++ ++ AR+ M+VA ++E+
Sbjct: 53 DIVENLEQNVEAQSSALGHILKAGF-EHREHGEQFARAQ----------MEVAASQEISY 101
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA-GYYSNNVVSIPGIIESLISILLGL 186
+ + ++FLG++S+ L+G+LG V+G++ F I G + + IPGI ++LI+ +G+
Sbjct: 102 LEKNINFLGTISAVAPLLGLLGTVVGIIESFLVIDFGSAGSPSLMIPGISKALITTAVGM 161
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
++IP+ IAY F + + ++E + F A L
Sbjct: 162 LIAIPALIAYRYFQRVVQDYIAELEQQSTLFHASL 196
>gi|299770411|ref|YP_003732437.1| biopolymer transport protein ExbB [Acinetobacter sp. DR1]
gi|298700499|gb|ADI91064.1| biopolymer transport protein ExbB [Acinetobacter sp. DR1]
Length = 211
Score = 128 bits (322), Expect = 6e-28, Method: Composition-based stats.
Identities = 54/215 (25%), Positives = 107/215 (49%), Gaps = 25/215 (11%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL--E 70
++ L G + L + SIL+ ++ I++ V R+ + + SL E
Sbjct: 1 MWELVRAGGWL----MLPLILCSILTVAISIERFVRL----RRSQVLPEALSGKSSLRAE 52
Query: 71 TVCKSLKNH---HNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ +SL+ + N L I + E ++ ++ AR+ M+VA ++E+
Sbjct: 53 DIVESLEQNVEVQNSALGHILKAGF-EHREHGEQFARAQ----------MEVAASQEISY 101
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA-GYYSNNVVSIPGIIESLISILLGL 186
+ + ++FLG++S+ L+G+LG V+G++ F I G + + IPGI ++LI+ +G+
Sbjct: 102 LEKNINFLGTLSAVAPLLGLLGTVVGIIESFLVIDFGSAGSPSLMIPGISKALITTAVGM 161
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
++IP+ IAY F + + ++E + F A L
Sbjct: 162 LIAIPALIAYRYFQRVVQDYIAELEQQSTLFHASL 196
>gi|71908823|ref|YP_286410.1| MotA/TolQ/ExbB proton channel [Dechloromonas aromatica RCB]
gi|71848444|gb|AAZ47940.1| MotA/TolQ/ExbB proton channel [Dechloromonas aromatica RCB]
Length = 201
Score = 128 bits (322), Expect = 6e-28, Method: Composition-based stats.
Identities = 46/214 (21%), Positives = 91/214 (42%), Gaps = 21/214 (9%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLR----RQFREFEQLFWSGQS 68
+ + G I L + SI+S ++II++ V + + F G +
Sbjct: 1 MIEIVKAAGWP----IWPLLLASIISVALIIERVVALRRSKVVPHGLLQRAVGEFKRGAN 56
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ + + L+ H +G + G R+ ++ + ++ A + E+
Sbjct: 57 NDKLLEELEGHSPLG-------------RVLSAGLRNVNSTREIMKESIEEAGSAVSHEL 103
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCV 188
L+ LG+++S L+G+ G V+GM+ F S + +N + GI +L + GL +
Sbjct: 104 NRYLTTLGTIASISPLMGLFGTVVGMIEIFGSQSPSGANPMQLAHGISVALYNTGFGLVI 163
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
+IPS IA+ F + F ++ME A +
Sbjct: 164 AIPSLIAWRHFRALADGFVVEMEQQAVRLVEYMH 197
>gi|310779065|ref|YP_003967398.1| outer membrane transport energization protein ExbB [Ilyobacter
polytropus DSM 2926]
gi|309748388|gb|ADO83050.1| outer membrane transport energization protein ExbB [Ilyobacter
polytropus DSM 2926]
Length = 203
Score = 128 bits (322), Expect = 7e-28, Method: Composition-based stats.
Identities = 43/208 (20%), Positives = 82/208 (39%), Gaps = 9/208 (4%)
Query: 17 FMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSL 76
G+ + + S++ +V+I KS+ F ++ F+ + W+ +
Sbjct: 4 IQNGGIL----MYFIVAMSVIGLAVVIDKSIYF--ASKEKGNFDDIKWNVKEYIEKGDYT 57
Query: 77 KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLG 136
L S K+ + ++ ++ +L + + LG
Sbjct: 58 GAFAL--LEKHDCSTYKVLKELLLQCTKNKDYSIVHMEEKAREVGLSQLPRLERGMWLLG 115
Query: 137 SMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIA 195
++ L+G+LG V GM+ F +IA Y + + V GI ++LI+ GL V+IP+ I
Sbjct: 116 IVAHTTPLLGLLGTVTGMIQAFHAIASYGTGDPSVLAEGISKALITTAGGLTVAIPAVIF 175
Query: 196 YNKFIEDSKKFAMQMEGFANEFSAILSR 223
YN F + ME + E +
Sbjct: 176 YNYFNKRIDTVVNNMEKSSVEMINFFRK 203
>gi|325122006|gb|ADY81529.1| hypothetical protein BDGL_000943 [Acinetobacter calcoaceticus
PHEA-2]
Length = 211
Score = 127 bits (321), Expect = 7e-28, Method: Composition-based stats.
Identities = 50/213 (23%), Positives = 104/213 (48%), Gaps = 21/213 (9%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
++ L G + L + SIL+ ++ I++ V + + S E +
Sbjct: 1 MWELVRAGGWL----MLPLILCSILTVAISIERFVRLRRSQVLPKALIDD--SSLRTEDI 54
Query: 73 CKSLKNH---HNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
++L+ + N LA I + ++ ++ AR+ M+VA ++E+ +
Sbjct: 55 VENLEQNVEVQNSALAHILKAGFD-HREHGEQFARAQ----------MEVAASQEISYLE 103
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA-GYYSNNVVSIPGIIESLISILLGLCV 188
+ ++FLG++S+ L+G+LG V+G++ F I G + + IPGI ++LI+ +G+ +
Sbjct: 104 KNINFLGTLSAVAPLLGLLGTVVGIIESFLVIDFGSAGSPSLMIPGISKALITTAVGMLI 163
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+IP+ +AY F + + ++E + F A L
Sbjct: 164 AIPALVAYRYFQRLVQDYIAELEQQSTLFHASL 196
>gi|254491815|ref|ZP_05104994.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Methylophaga thiooxidans DMS010]
gi|224463293|gb|EEF79563.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Methylophaga thiooxydans DMS010]
Length = 218
Score = 127 bits (321), Expect = 7e-28, Method: Composition-based stats.
Identities = 52/217 (23%), Positives = 86/217 (39%), Gaps = 16/217 (7%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
+ LF G + LFI S++S ++I ++ + R E W
Sbjct: 1 MLELFKAGGWL----MIPLFICSVISIAIIAERFWSLQQKRIAPPELVTQIW-------- 48
Query: 73 CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKL 132
+ LK + A S + G + ++ ++ + L
Sbjct: 49 -QWLKYKQVDASRIKALQANSPLGQILASGLINRNSSREITKESIEDIGRHVTVALERNL 107
Query: 133 SFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVS-IPGIIESLISILLGLCVSIP 191
+ LG++++ L+G+LG V+GM+ F I N + GI E+LI+ GL V+IP
Sbjct: 108 NTLGTVAAISPLIGLLGTVIGMIKVFAVITAEGVGNPETLAGGISEALITTATGLVVAIP 167
Query: 192 SSIAYNKFIEDSKKFAMQMEGFANEFSAILS--RQTE 226
S I Y F K + ME A + IL RQ +
Sbjct: 168 SLIFYRYFRGKISKLVVGMEEQAMQLIEILHGDRQFD 204
>gi|260889990|ref|ZP_05901253.1| MotA/TolQ/ExbB proton channel family protein [Leptotrichia
hofstadii F0254]
gi|260860596|gb|EEX75096.1| MotA/TolQ/ExbB proton channel family protein [Leptotrichia
hofstadii F0254]
Length = 208
Score = 127 bits (321), Expect = 8e-28, Method: Composition-based stats.
Identities = 43/203 (21%), Positives = 90/203 (44%), Gaps = 17/203 (8%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAI 87
+ ++ + SI +VII+K F++ ++ E E+ + K+L+ + +
Sbjct: 12 MWVILLASISGLAVIIEKLYTFLSKEKKLSENEK--------NQLYKALRTGSREEILKL 63
Query: 88 FMSAMSEWKKSCDKGARS--------PIGIQDRIDRMMDVAIARELEEITEKLSFLGSMS 139
KS K + + I+ ++ +I + ++ + +S LG++
Sbjct: 64 CKDKTDSVSKSVTKIVSNTDINFDELDNSHRQVIEGIISESILEQTTKLEKGMSLLGTVV 123
Query: 140 SAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNK 198
+A +G+LG V GM+ F ++ ++ + GI E+L + GL V+IP+ + YN
Sbjct: 124 NAAPQLGLLGTVTGMIAAFSALTRNGTSTAKIVAGGISEALYTTAFGLIVAIPALVFYNY 183
Query: 199 FIEDSKKFAMQMEGFANEFSAIL 221
F +ME A +F + +
Sbjct: 184 FNRRIDVIVAEMERVALQFLSRV 206
>gi|300310500|ref|YP_003774592.1| biopolymer transport ExbB-like transmembrane protein
[Herbaspirillum seropedicae SmR1]
gi|300073285|gb|ADJ62684.1| biopolymer transport ExbB-like transmembrane protein
[Herbaspirillum seropedicae SmR1]
Length = 201
Score = 127 bits (321), Expect = 8e-28, Method: Composition-based stats.
Identities = 45/214 (21%), Positives = 89/214 (41%), Gaps = 21/214 (9%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLR----RQFREFEQLFWSGQS 68
+ A+ + G I L I SI+ +++I++ V R + +++ SG+
Sbjct: 1 MLAIILAAGWP----IWPLLIASIIGLALVIERLVYLRRSRILPPDLLNQVVRVYQSGRI 56
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ V L+ + +G G R+ ++ + ++ A +
Sbjct: 57 TDDVADKLEQNSPLG-------------HVLAAGLRNVDAPREVMKEAIEEAGQAAAHRL 103
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCV 188
L+ LG+++S L+G+ G V+GM+ F S +N GI +L + GL +
Sbjct: 104 ERFLTTLGTIASLAPLMGLFGTVVGMIEIFASQNAAGTNPAQLAHGISIALYNTGFGLAI 163
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
++P+ + Y F F + ME A +F I+
Sbjct: 164 AMPALVFYRHFRALVDGFVVDMEQQAVKFVDIVH 197
>gi|39934424|ref|NP_946700.1| putative transport protein ExbB2 [Rhodopseudomonas palustris
CGA009]
gi|39648273|emb|CAE26793.1| putative transport protein ExbB2 [Rhodopseudomonas palustris
CGA009]
Length = 675
Score = 127 bits (321), Expect = 8e-28, Method: Composition-based stats.
Identities = 47/204 (23%), Positives = 79/204 (38%), Gaps = 20/204 (9%)
Query: 25 KCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ---------LFWSGQSLETVC-- 73
+I +L + +++SW V++ ++ R F S S E V
Sbjct: 440 WVVIAILMVMAVISWMVMVDRASYLRRQARANARFIACYNAVDFDLRLLSYGSPEDVATL 499
Query: 74 ------KSLKNHHNIGLAAIFMSAMSEWKKSCDKGAR--SPIGIQDRIDRMMDVAIAREL 125
K + L I+ A E ++ +G + +D + RE
Sbjct: 500 GGRLNNKDAALMRSSSLYRIYHIAADEIRRRSHQGGLPVLTSNSIAAMRAALDGGVVRES 559
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILL 184
+ + + L S G +G+LG V+G+M F +IA NV PGI +L++ +
Sbjct: 560 QRLNRLMVMLTIAISGGPFLGLLGTVVGVMITFAAIAASGDVNVNAIAPGIAAALVATVA 619
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAM 208
GL V+IP+ YN I K
Sbjct: 620 GLGVAIPALFGYNYLISQIKNLTA 643
>gi|262195327|ref|YP_003266536.1| MotA/TolQ/ExbB proton channel [Haliangium ochraceum DSM 14365]
gi|262078674|gb|ACY14643.1| MotA/TolQ/ExbB proton channel [Haliangium ochraceum DSM 14365]
Length = 245
Score = 127 bits (320), Expect = 1e-27, Method: Composition-based stats.
Identities = 47/226 (20%), Positives = 93/226 (41%), Gaps = 27/226 (11%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFIT----LRRQFREFEQLFW 64
MD SI+ V+ + LF FS++ ++V +++ V R+ +
Sbjct: 1 MDQSIWE------WLVQATLWCLFGFSVVVFAVAMERVVVLWRFTDRARKLSDTVNRCLM 54
Query: 65 SGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARE 124
G E +S LA +F+ + +S + +D + AR
Sbjct: 55 RGARGEG--RSACERSRSPLADVFLVGYERFGRSKP----------ENVDSAVHRERARV 102
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI-----AGYYSNNVVSIPGIIESL 179
+ + +L G++ + VG+ G V+G+M F+ + +G + V I E+L
Sbjct: 103 MVSLKNRLWIPGTIGATAPFVGLFGTVVGIMEAFRDLERAEGSGQEAGIGVVSGHISEAL 162
Query: 180 ISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
I+ +G+ V++ + I +N F + + M+ + +EF L T
Sbjct: 163 IATAVGIFVAVIAVIVFNLFNQRIGRIGMEAKMLTDEFLEHLHEST 208
>gi|308275036|emb|CBX31635.1| hypothetical protein N47_E51470 [uncultured Desulfobacterium sp.]
Length = 600
Score = 127 bits (320), Expect = 1e-27, Method: Composition-based stats.
Identities = 42/189 (22%), Positives = 81/189 (42%), Gaps = 13/189 (6%)
Query: 41 VIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHN----IGLAAIFMSAMSEWK 96
+ I K+ ++R +F F L K + + L I+ + E
Sbjct: 404 IFIYKTYILFIIKRTNNDFLVYFDGVTDLRKAEKVKEEDDDYFLSSSLYRIYAAGKKELT 463
Query: 97 KSCDKGARSPIGIQ-------DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILG 149
G+ +P ++ + + ++ A RE +++ L FL + G G+LG
Sbjct: 464 NKV-GGSGNPDELKKLTPKALNSVKAAIERAYVRETLKLSAWLVFLSMSVAGGPFFGLLG 522
Query: 150 AVLGMMGFFQSIAGYYSNNVVS-IPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAM 208
V G+M F +++ N+++ PG+ +L + + GL V+IP+ +AYN + K
Sbjct: 523 TVWGVMNTFAAMSEAGEANIMAIAPGVASALATTVFGLIVAIPALLAYNYLMTKIKNINS 582
Query: 209 QMEGFANEF 217
+M F +E
Sbjct: 583 EMVLFVDEL 591
>gi|86749340|ref|YP_485836.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris HaA2]
gi|86572368|gb|ABD06925.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris HaA2]
Length = 671
Score = 127 bits (320), Expect = 1e-27, Method: Composition-based stats.
Identities = 46/204 (22%), Positives = 82/204 (40%), Gaps = 20/204 (9%)
Query: 25 KCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLF------------WSGQSLETV 72
+I +L + +++SW V++ ++ R F + S + + T+
Sbjct: 436 WVVIAILMVMAVISWMVMVDRASYLRRQARANARFMACYNAVDFDLRLLGYGSPEDVATL 495
Query: 73 CKSLKNH-----HNIGLAAIFMSAMSEWKKSCDKGA--RSPIGIQDRIDRMMDVAIAREL 125
L N + L I+ A E ++ +G + +D + RE
Sbjct: 496 GGRLDNKDAALMRSSSLYRIYHIAADEIRRRSGQGGVPTLSSNSVAAMRAALDGGVVRES 555
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILL 184
+ + + L S G +G+LG V+G+M F +IA NV PGI +L++ +
Sbjct: 556 QRLNRLMVMLTIAISGGPFLGLLGTVVGVMITFAAIAASGDVNVNAIAPGIAAALVATVA 615
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAM 208
GL V+IP+ YN I K
Sbjct: 616 GLGVAIPALFGYNYLISQIKNLTA 639
>gi|152981742|ref|YP_001354271.1| biopolymer transport protein ExbB [Janthinobacterium sp. Marseille]
gi|151281819|gb|ABR90229.1| biopolymer transport protein ExbB [Janthinobacterium sp. Marseille]
Length = 203
Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats.
Identities = 49/216 (22%), Positives = 95/216 (43%), Gaps = 23/216 (10%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLR----RQFREFEQLFWSGQS 68
+ A+ G I LL I S+++ ++II++S+ R E +++ SG+
Sbjct: 1 MLAIIHAAGWP----IWLLLIASVIALTLIIERSMYLRRRRILPPSLLEEVVRVYRSGRI 56
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ V +L+ + +G + G R+ +D + ++ A +
Sbjct: 57 DDNVVNTLEQNSPLG-------------RVLAAGLRNVDAPRDVMKESIEEAGRGTAHTL 103
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFF--QSIAGYYSNNVVSIPGIIESLISILLGL 186
L+ LG++++ L+G+ G V+GM+ F Q+ G +N GI +L + GL
Sbjct: 104 ERFLTTLGTIATLAPLMGLFGTVVGMIEIFGSQNATGTGANPAQLAHGISIALYNTGFGL 163
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
+++PS + Y F F + ME A +F I+
Sbjct: 164 AIAMPSLVFYRHFRALVDSFIIDMEQQAVKFVDIVH 199
>gi|34498803|ref|NP_903018.1| exbB-like biopolymer transport [Chromobacterium violaceum ATCC
12472]
gi|34104655|gb|AAQ61012.1| probable exbB-like biopolymer transport [Chromobacterium violaceum
ATCC 12472]
Length = 204
Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats.
Identities = 40/218 (18%), Positives = 88/218 (40%), Gaps = 21/218 (9%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITL----RRQFREFEQLFWSGQS 68
++A+ G + I S++S ++I+++ + + Q +
Sbjct: 1 MWAIVEAAGWPIWTI----IAASVVSLAIILERLYTLRRGAAVPQGLLAQTLQEYRRVGD 56
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
E + + L+ H L +F + + G ++ + ++ + ++
Sbjct: 57 KEELLQRLQGH--SPLGRLFAAGLRNVH-----------GSREVMKEAIEDEGRQVAYQL 103
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCV 188
L+ LG++++ L+G+LG V+GM+ F S +N GI +L + GL V
Sbjct: 104 ERLLTTLGTIAAMAPLLGLLGTVIGMIEIFGSQNASGANPQQLAHGISVALYNTAFGLIV 163
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IPS + Y F ++ME A + + + +
Sbjct: 164 AIPSMMFYRYFRSKVDGLLVEMEAQAVKLVEVAHGERK 201
>gi|323135641|ref|ZP_08070724.1| MotA/TolQ/ExbB proton channel [Methylocystis sp. ATCC 49242]
gi|322398732|gb|EFY01251.1| MotA/TolQ/ExbB proton channel [Methylocystis sp. ATCC 49242]
Length = 214
Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats.
Identities = 47/212 (22%), Positives = 89/212 (41%), Gaps = 19/212 (8%)
Query: 6 LAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS 65
+ +S ++F+ G K ++ +L + S+ +W +I++ V + + +
Sbjct: 1 MDHTSLSPLSMFLNAGPVGKIVMAMLLLASVWTWVLIVEGVVAVMRISK----------- 49
Query: 66 GQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
S ++ +G+ A +A E + D + ++RI M L
Sbjct: 50 ------AAASARSGGPVGVLAPVEAAGREAF-ALDLPDETIGDKRERIAEHMSRTAREFL 102
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILL 184
+ L L +SS VG+ G V G+M F IA ++ V PGI E+L +
Sbjct: 103 TKAEGGLPNLAVISSVAPFVGLFGTVWGIMTSFAGIAQSQDTSLAVVAPGIAEALAATAY 162
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANE 216
GL +IP+S+AYN+ + Q+ + +
Sbjct: 163 GLAAAIPASVAYNRIGSAFARLGQQVAHYIED 194
>gi|241663983|ref|YP_002982343.1| MotA/TolQ/ExbB proton channel [Ralstonia pickettii 12D]
gi|309781425|ref|ZP_07676161.1| MotA/TolQ/ExbB proton channel family domain protein [Ralstonia sp.
5_7_47FAA]
gi|240866010|gb|ACS63671.1| MotA/TolQ/ExbB proton channel [Ralstonia pickettii 12D]
gi|308919838|gb|EFP65499.1| MotA/TolQ/ExbB proton channel family domain protein [Ralstonia sp.
5_7_47FAA]
Length = 206
Score = 126 bits (318), Expect = 2e-27, Method: Composition-based stats.
Identities = 44/213 (20%), Positives = 89/213 (41%), Gaps = 17/213 (7%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLR----RQFREFEQLFWSGQS 68
+F++ G I L I S+L+ ++II++ V + + + E + ++
Sbjct: 1 MFSIIQAAGWP----IWPLLIASVLALALIIERFVALQRKKIIPPKVYDEALAVAHQRRA 56
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
V +L+ L + +A+ P +D +++ A +
Sbjct: 57 TPEVVNTLEQ--GSPLGRLLAAALRHV-------VLHPNTSRDAAKEVVEEAGQNVAHRL 107
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCV 188
L+ LG+++S L+G+ G V+GM+ F S +N GI +L + LGL V
Sbjct: 108 ERYLNALGTIASVAPLMGLFGTVVGMIEIFGSQTAAGTNPQALAHGISVALYNTALGLVV 167
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+IP+ I + F + +++E + F +
Sbjct: 168 AIPTLIFWRYFRGVVDNYVVELEHLSTTFLDAI 200
>gi|213585736|ref|ZP_03367562.1| biopolymer transport protein ExbB [Salmonella enterica subsp.
enterica serovar Typhi str. E98-0664]
Length = 173
Score = 126 bits (318), Expect = 2e-27, Method: Composition-based stats.
Identities = 38/147 (25%), Positives = 69/147 (46%), Gaps = 3/147 (2%)
Query: 85 AAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLL 144
A + A +E + S +G+ GI++R ++ +A + +L ++ +
Sbjct: 14 AQLINEAQNELELS--QGSEDNEGIKERTGFRLERRVAAVGRYMGRGNGYLATIGAISPF 71
Query: 145 VGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDS 203
VG+ G V G+M F IA + N+ V PGI E+L++ +GL +IP+ + YN F
Sbjct: 72 VGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGIAEALLATAIGLVAAIPAVVIYNIFARQI 131
Query: 204 KKFAMQMEGFANEFSAILSRQTEGNIS 230
+ + A + + SR + N S
Sbjct: 132 GSYKATLGDVAAQVLLLQSRDLDLNAS 158
>gi|187250855|ref|YP_001875337.1| biopolymer transport protein [Elusimicrobium minutum Pei191]
gi|186971015|gb|ACC98000.1| Biopolymer transport protein [Elusimicrobium minutum Pei191]
Length = 209
Score = 126 bits (318), Expect = 2e-27, Method: Composition-based stats.
Identities = 50/221 (22%), Positives = 91/221 (41%), Gaps = 28/221 (12%)
Query: 9 MDIS----IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFIT---LRRQFREFEQ 61
MD S I L G ++ L SI+S ++I+++ + R+ + +
Sbjct: 1 MDFSNITNIEELLKAGGP----VLIFLIFLSIVSLTIILERFFTLRKQIKMSRKLIAYAK 56
Query: 62 LFWSGQSLETVCKSLKNH--HNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDV 119
++ + ++ N + K+ R ++D D ++D
Sbjct: 57 YQLQAGQIDKIIEACGRDIAKNTPAGRLI--------KTLLTSNRQGANLKDYSDEVID- 107
Query: 120 AIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV---VSIPGII 176
E+ + +KL L ++ S +G+ G VLG+M F +A + V GI
Sbjct: 108 ---WEVTLLHKKLPVLATLGSTTPFIGLFGTVLGVMRAFADLAAMTAATAGPSVVAKGIA 164
Query: 177 ESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEF 217
E+LI+ GL V++P+ IAYN F F ++E A+E
Sbjct: 165 EALINTAAGLFVAVPAVIAYNYFTTQINFFERELENIASEI 205
>gi|292490661|ref|YP_003526100.1| MotA/TolQ/ExbB proton channel [Nitrosococcus halophilus Nc4]
gi|291579256|gb|ADE13713.1| MotA/TolQ/ExbB proton channel [Nitrosococcus halophilus Nc4]
Length = 211
Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats.
Identities = 44/217 (20%), Positives = 83/217 (38%), Gaps = 18/217 (8%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
+ + G + + + SI++ +II++ + R + W Q +
Sbjct: 1 MLEIIKAGGWL----MLPILVCSIVAIGIIIERFWSLRRQRVAPKHLVGQIWQWQCCNQL 56
Query: 73 --CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
+ + N L I + + S + + ++ E+
Sbjct: 57 HELQIKRVRENSPLGRILAAGLVNRNHSR-----------EIMKESIEDVGRHVTLELER 105
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYY-SNNVVSIPGIIESLISILLGLCVS 189
L+ LG++++ L+G+LG V+GM+ F I N V GI E+LI+ GL V+
Sbjct: 106 FLNTLGTIAAITPLLGLLGTVIGMIKVFTVINTQGVGNPAVLAGGISEALITTAAGLAVA 165
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
IPS + Y F + ME A + ++ E
Sbjct: 166 IPSLMFYRYFRGKVMALVVDMEEQAIQLVEVMHGDRE 202
>gi|88705098|ref|ZP_01102810.1| MotA/TolQ/ExbB proton channel family protein [Congregibacter
litoralis KT71]
gi|88700793|gb|EAQ97900.1| MotA/TolQ/ExbB proton channel family protein [Congregibacter
litoralis KT71]
Length = 207
Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats.
Identities = 42/220 (19%), Positives = 86/220 (39%), Gaps = 20/220 (9%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS---GQSL 69
+ L GL + ++ S+++ ++ I+++ R W L
Sbjct: 1 MLELITAGGLL----MIIIIACSVVAIAICIERTYVLNRRRIAPPHLLANVWKQLKAGEL 56
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+ K + L I + ++ D + ++ A + ++
Sbjct: 57 D-AAKLRNLRDSSPLGRILAAGLANAHHGR-----------DVMKESIEEAAGHVVHDLE 104
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCV 188
L+ LG++++ L+G+LG V+GM+ F I + N GI E+LI+ GLCV
Sbjct: 105 RYLNTLGTIAAIAPLLGLLGTVVGMIRVFAEIMSQGTGNASALAGGISEALITTAAGLCV 164
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
+IP+ + + F +++E + L + EG
Sbjct: 165 AIPALVMHRYFSGRIDGIVVELEQQTIKLVDALHAREEGR 204
>gi|212691799|ref|ZP_03299927.1| hypothetical protein BACDOR_01294 [Bacteroides dorei DSM 17855]
gi|237708609|ref|ZP_04539090.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
gi|237724123|ref|ZP_04554604.1| conserved hypothetical protein [Bacteroides sp. D4]
gi|265755207|ref|ZP_06089977.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
gi|212665700|gb|EEB26272.1| hypothetical protein BACDOR_01294 [Bacteroides dorei DSM 17855]
gi|229437583|gb|EEO47660.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4]
gi|229457309|gb|EEO63030.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
gi|263234349|gb|EEZ19939.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
Length = 238
Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats.
Identities = 38/220 (17%), Positives = 88/220 (40%), Gaps = 19/220 (8%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
++++ + ++ G I+ +L + S+ + + ++ ++ F +
Sbjct: 33 MNLWDMAVKGGW----IMLVLALLSVACFYIFFERLAYIRKAGKEDPLFMERIRDYIRTG 88
Query: 71 TVCKSLK--NHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
V ++ N A + +S + + ++ A E+ ++
Sbjct: 89 EVKSAINYCRITNTPSARMIEKGISRMGRPVAD-----------VQAAIENAGNIEVAKL 137
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI--PGIIESLISILLGL 186
+ ++S ++G LG V GM+ F +A +N +++ GI E++I+ + GL
Sbjct: 138 ENGFPVIATVSGGAPMLGFLGTVTGMVRAFWEMANAGNNIDITLLSGGIYEAMITTVGGL 197
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
V I + AYN + K QME +F +L+ +
Sbjct: 198 IVGIAAMFAYNYLVVRVDKVVGQMEARTMDFMDLLNEPVQ 237
>gi|302392223|ref|YP_003828043.1| MotA/TolQ/ExbB proton channel [Acetohalobium arabaticum DSM 5501]
gi|302204300|gb|ADL12978.1| MotA/TolQ/ExbB proton channel [Acetohalobium arabaticum DSM 5501]
Length = 221
Score = 126 bits (316), Expect = 3e-27, Method: Composition-based stats.
Identities = 46/209 (22%), Positives = 92/209 (44%), Gaps = 19/209 (9%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLR----RQFREFEQLFWSGQSLETVCKSLKNHHNIG 83
I L I SILS ++I+++ F ++ R + + L G+ L K + N
Sbjct: 12 IIPLLICSILSVAIILERYFYFRSINNNDFRLVKRVKLLLSDGK-LSKAKKEAEK-TNGP 69
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
+AA+ ++ + +++ + + E+ + ++L L ++S
Sbjct: 70 IAAMVLAGLEKYRHDRQT-----------VKEFIQARGQHEIRVMEKRLRVLDFIASVSP 118
Query: 144 LVGILGAVLGMMGFFQSIAGYY--SNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIE 201
L+G+LG V+G++ F +AG + GI E+LIS +GL V+IP+ + Y
Sbjct: 119 LLGLLGTVIGIIKSFDILAGAQGMAAPSALSSGIAEALISTAIGLIVAIPTMLFYTYLDS 178
Query: 202 DSKKFAMQMEGFANEFSAILSRQTEGNIS 230
+ +M+ ++ +L+ N S
Sbjct: 179 KVEAKMTEMQQWSTRLIEMLAEDPSSNCS 207
>gi|254514451|ref|ZP_05126512.1| MotA/TolQ/ExbB proton channel [gamma proteobacterium NOR5-3]
gi|219676694|gb|EED33059.1| MotA/TolQ/ExbB proton channel [gamma proteobacterium NOR5-3]
Length = 207
Score = 126 bits (316), Expect = 3e-27, Method: Composition-based stats.
Identities = 41/222 (18%), Positives = 85/222 (38%), Gaps = 20/222 (9%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS---GQSL 69
+ L G + ++ S+++ ++ I+++ R W L
Sbjct: 1 MLELITAGGWL----MVIIIACSVVAIAICIERTYVLNRRRIAPPHLLASVWKQLKAGEL 56
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+ K + L I + ++ D + ++ A + E+
Sbjct: 57 D-AAKLRNLRDSSPLGRILAAGLANAHHGR-----------DVMKESIEEAAGHVVHELE 104
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCV 188
L+ LG++++ L+G+LG V+GM+ F I + N GI E+LI+ GLCV
Sbjct: 105 RYLNTLGTIAAIAPLLGLLGTVVGMIRVFAEIMSQGTGNASALAGGISEALITTAAGLCV 164
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
+IP+ + + F +++E + L + + S
Sbjct: 165 AIPALVMHRYFSGRIDGIVIELEQQTIKLVDALHAREDERDS 206
>gi|89900323|ref|YP_522794.1| MotA/TolQ/ExbB proton channel [Rhodoferax ferrireducens T118]
gi|89345060|gb|ABD69263.1| MotA/TolQ/ExbB proton channel [Rhodoferax ferrireducens T118]
Length = 300
Score = 126 bits (316), Expect = 4e-27, Method: Composition-based stats.
Identities = 49/226 (21%), Positives = 97/226 (42%), Gaps = 12/226 (5%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N YG+ +++ Q L + + LL + S+LSW II K + L Q + ++
Sbjct: 74 NPYGMR-------SVWQQGDLVARTTLLLLALMSLLSWYFIIAKLLAQGRLSAQAKAAKK 126
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
F +L + L I SA+ ++ + + + + + + ++
Sbjct: 127 AFAVADALNKRVEGLDKASPFRF--IAESALEAARRYYSLAGQ--VDMNSWLSQDIVRSV 182
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLI 180
A E LS L ++ S VG+ G V G+ +I ++ + G + E+LI
Sbjct: 183 ATLQMRSQEGLSVLATIGSTAPFVGLFGTVWGIYNALVTIGVSGQASIEKVAGPVGEALI 242
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
LGL V++P+ + YN + ++ ++GF +E +L + +
Sbjct: 243 MTALGLAVAVPAVLGYNWLVRRNRVTLHAVKGFGSELHTLLLVEID 288
>gi|227327599|ref|ZP_03831623.1| putative biopolymer transport protein [Pectobacterium carotovorum
subsp. carotovorum WPP14]
Length = 146
Score = 125 bits (315), Expect = 4e-27, Method: Composition-based stats.
Identities = 32/116 (27%), Positives = 61/116 (52%), Gaps = 1/116 (0%)
Query: 108 GIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSN 167
+ DR++R + I RE + L+ L S+ S +G+ G V G+M Q I S
Sbjct: 2 HLPDRVERALQQQIQRERRSLESGLAVLASIGSTSPFIGLFGTVWGIMAALQEIGLSGSA 61
Query: 168 NVVSIPG-IIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
++ ++ G I +LI+ +G+ V++P+ + YN F+ K M+ FA++ +++
Sbjct: 62 SLDTVAGPIGNALIATGIGIAVAVPAVLIYNYFLRRLKLAVADMDDFAHDVYSVMQ 117
>gi|42522085|ref|NP_967465.1| tolQ protein [Bdellovibrio bacteriovorus HD100]
gi|39574616|emb|CAE78458.1| tolQ protein [Bdellovibrio bacteriovorus HD100]
Length = 209
Score = 125 bits (314), Expect = 5e-27, Method: Composition-based stats.
Identities = 43/200 (21%), Positives = 80/200 (40%), Gaps = 15/200 (7%)
Query: 17 FMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFW---SGQSLETVC 73
F LA + ++ +L + S+LS +I+++ + + + SLE V
Sbjct: 7 FTIAHLADQVVLWILLVLSVLSIGMILERYFALKKISAESQRVRARIKLALQSNSLEDV- 65
Query: 74 KSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLS 133
+ L N A+ + + KG +R E+ + L
Sbjct: 66 EDLAKDPNSIEGRAAGYALKHMRDAGSKGLSEIFNTFALTER----------PELEKFLG 115
Query: 134 FLGSMSSAGLLVGILGAVLGMMGFFQSIAGY-YSNNVVSIPGIIESLISILLGLCVSIPS 192
FL ++ S +G+ G VLG+M F +A + + GI +L++ GL V+IP+
Sbjct: 116 FLATVGSNAPYIGLFGTVLGIMKAFNDLATAPEAGQQTVMAGISMALVATAAGLFVAIPA 175
Query: 193 SIAYNKFIEDSKKFAMQMEG 212
AYN + + + +E
Sbjct: 176 VAAYNYYSKQVRGVFQNLES 195
>gi|257125314|ref|YP_003163428.1| MotA/TolQ/ExbB proton channel [Leptotrichia buccalis C-1013-b]
gi|257049253|gb|ACV38437.1| MotA/TolQ/ExbB proton channel [Leptotrichia buccalis C-1013-b]
Length = 208
Score = 125 bits (314), Expect = 6e-27, Method: Composition-based stats.
Identities = 45/203 (22%), Positives = 90/203 (44%), Gaps = 17/203 (8%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAI 87
+ ++ SI ++I++K+ F+T ++ E E+ + KSL+ + + +
Sbjct: 12 MWVILFASICGLAIILEKTYTFLTKEKKLTENEK--------NKLYKSLRTGNREEILRL 63
Query: 88 FMSAMSEWKKSCDK--------GARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMS 139
KS K A + I+ ++ +I + E+ + +S LG++
Sbjct: 64 CKDKTDSVSKSVTKIVSNMDINFAELDNSHRQVIEGIISESILEQTTELEKGMSLLGTVV 123
Query: 140 SAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNK 198
+A +G+LG V GM+ F ++ + + GI E+L + GL V+IP+ + YN
Sbjct: 124 NAAPQLGLLGTVTGMITAFSALTRNGESTARIVASGISEALYTTAFGLIVAIPALVFYNY 183
Query: 199 FIEDSKKFAMQMEGFANEFSAIL 221
F +ME A +F + +
Sbjct: 184 FNRQIDIIVAEMERAALQFLSRV 206
>gi|330881261|gb|EGH15410.1| biopolymer transport protein ExbB [Pseudomonas syringae pv.
glycinea str. race 4]
Length = 160
Score = 125 bits (314), Expect = 6e-27, Method: Composition-based stats.
Identities = 37/134 (27%), Positives = 70/134 (52%), Gaps = 2/134 (1%)
Query: 91 AMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGA 150
A+ E ++ + A + I DR++R + I +E + + L S+ S +G+ G
Sbjct: 6 AVDESPRTTQQLAHT-INRSDRLERNLRQQIQKERRALESGQAILASIGSTAPFIGLFGT 64
Query: 151 VLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQ 209
V G+M QSI S ++ ++ G I +L++ +G+ V++P+ + YN F+ K
Sbjct: 65 VWGIMEALQSIGVTGSASLEAVAGPIGHALVATGVGIAVAVPAVLIYNFFLRRLKLAVAD 124
Query: 210 MEGFANEFSAILSR 223
M+ FA++F A+ R
Sbjct: 125 MDDFAHDFDALAQR 138
>gi|308270223|emb|CBX26835.1| hypothetical protein N47_A08640 [uncultured Desulfobacterium sp.]
Length = 212
Score = 125 bits (314), Expect = 6e-27, Method: Composition-based stats.
Identities = 49/190 (25%), Positives = 93/190 (48%), Gaps = 10/190 (5%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLA 85
I+ LL + SILS ++II+KS+ + R+ + W E V K +++ + +
Sbjct: 17 WILMLLIVLSILSIALIIEKSILYTRWLRETKR----LW-----EEVKKYFESNSSSEME 67
Query: 86 AIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLV 145
I + + + G S + ++ + ++ EI +L+FLG++ + +
Sbjct: 68 NILQQSNTPITRIIRAGLGS-LTEKESMMEAIEAEKIITRMEIERRLAFLGTLGTNAPFI 126
Query: 146 GILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKK 205
G+ G VLG++ F+ +A I GI E+LI+ +GL V+IPS++ YN F + S
Sbjct: 127 GLFGTVLGIIHTFKDLAISGQGGTSVISGISEALIATGVGLWVAIPSAVFYNIFKKKSSD 186
Query: 206 FAMQMEGFAN 215
+ + A+
Sbjct: 187 MMVYADSIAH 196
>gi|325299879|ref|YP_004259796.1| MotA/TolQ/ExbB proton channel [Bacteroides salanitronis DSM 18170]
gi|324319432|gb|ADY37323.1| MotA/TolQ/ExbB proton channel [Bacteroides salanitronis DSM 18170]
Length = 240
Score = 125 bits (314), Expect = 6e-27, Method: Composition-based stats.
Identities = 39/230 (16%), Positives = 92/230 (40%), Gaps = 19/230 (8%)
Query: 3 NYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQL 62
+++++ + + G I+ +L I S++++ V +++ ++ F
Sbjct: 26 PVASGEPEMNLWDMACKGGW----IMIVLAIMSVIAFYVFFERAFAIRKAGKEDPLFMDR 81
Query: 63 FWSGQSLETVCKSLK--NHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVA 120
+ ++ N A + ++ + + ++
Sbjct: 82 IRDYIKTGEIKSAINYCRMVNTPSARMIEKGITRMGRPVSD-----------VQAAIENT 130
Query: 121 IARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI--PGIIES 178
E+ ++ L+ + ++SS ++G LG V GM+ F ++A +N +++ GI E+
Sbjct: 131 GNIEVAKLENGLAIIATVSSGAPMLGFLGTVTGMVRAFWNMANAGNNIDITLLSGGIYEA 190
Query: 179 LISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
+I+ + GL V I + AYN + K QME F +++ E
Sbjct: 191 MITTVGGLVVGIAAMFAYNHLVYRVDKVVSQMEARTMAFMDLINEPDEKR 240
>gi|330722473|gb|EGH00304.1| MotA/TolQ/ExbB proton channel family protein [gamma proteobacterium
IMCC2047]
Length = 212
Score = 124 bits (313), Expect = 6e-27, Method: Composition-based stats.
Identities = 38/221 (17%), Positives = 85/221 (38%), Gaps = 18/221 (8%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
+ + G + + + S+++ ++I+++ + + W +
Sbjct: 1 MLEMIKSGGWL----MLPILLCSVVALAIIVERFWTLRPNKIAPKNLLAEVWGWIRSNQL 56
Query: 73 CKS--LKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
+ + L I + +S K D + + + + ++
Sbjct: 57 NAERMKELRESTPLGKILAAGLSNSKYGRDI-----------MKESIQEVASHVIHDMER 105
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVS 189
L+ LG+++ L+G+LG V+GM+ F +I + N V GI E+LI+ GL V+
Sbjct: 106 YLNTLGTIAVITPLLGLLGTVIGMIKVFTAIMIQGTGNANVLAGGISEALITTAAGLTVA 165
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
IP+ + + + + + ME A + + N S
Sbjct: 166 IPAVVFHRMYQRRIDELVVDMEQEAVKLVDVFHGDRGKNSS 206
>gi|319952330|ref|YP_004163597.1| outer membrane transport energization protein exbb [Cellulophaga
algicola DSM 14237]
gi|319420990|gb|ADV48099.1| outer membrane transport energization protein ExbB [Cellulophaga
algicola DSM 14237]
Length = 230
Score = 124 bits (313), Expect = 8e-27, Method: Composition-based stats.
Identities = 44/219 (20%), Positives = 89/219 (40%), Gaps = 15/219 (6%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS--GQS 68
+SI L + G II++LF+ ++ + ++ + + F
Sbjct: 23 LSIIDLIIDGGAGSIIIISVLFVMLFVALYIYFERIFAIKAASKIDKNFMNQIRDHVSNG 82
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
K L + +A + +KG + I++ ++ A E+ ++
Sbjct: 83 KLEAAKLLCAQTDSPVA-----------RLTEKGISRIGKPLEDINKAIENAGTLEVYKL 131
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA--GYYSNNVVSIPGIIESLISILLGL 186
+ +S L +++ A ++G LG V+GM+ F +A G + GI ++ + + GL
Sbjct: 132 EKNVSILATVAGAAPMIGFLGTVIGMILAFHEMASSGGQAEMGSLASGIYTAMTTTVAGL 191
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
V I + I YN + + K ME A +F +L+
Sbjct: 192 IVGIIAYIGYNHLVNRTDKVVHSMEANAVDFLDLLNEPL 230
>gi|300690600|ref|YP_003751595.1| biopolymer transport [Ralstonia solanacearum PSI07]
gi|299077660|emb|CBJ50296.1| biopolymer transport [Ralstonia solanacearum PSI07]
Length = 206
Score = 124 bits (313), Expect = 8e-27, Method: Composition-based stats.
Identities = 41/213 (19%), Positives = 89/213 (41%), Gaps = 17/213 (7%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLR----RQFREFEQLFWSGQS 68
+F++ G I L I S+L+ ++II++ + + + + E + ++
Sbjct: 1 MFSIIQAAGWP----IWPLLIASVLALALIIERFIALQRNKIIPPKVYDEALAVAHQRKA 56
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
V +L+ L + +A+ P ++ +++ A +
Sbjct: 57 TPEVVNTLEQ--GSPLGRVLAAALRHV-------VLHPATTREAAKEVVEEAGQNVAHRL 107
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCV 188
L+ LG+++S L+G+ G V+GM+ F S +N GI +L + LGL V
Sbjct: 108 ERYLNALGTIASVAPLMGLFGTVVGMIEIFGSQTAAGTNPQTLAHGISVALYNTALGLVV 167
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+IP+ I + F + +++E + + +
Sbjct: 168 AIPTLIFWRYFRGVVDNYVVELEHLSATYLDAI 200
>gi|148264653|ref|YP_001231359.1| MotA/TolQ/ExbB proton channel [Geobacter uraniireducens Rf4]
gi|146398153|gb|ABQ26786.1| outer membrane transport energization protein ExbB [Geobacter
uraniireducens Rf4]
Length = 598
Score = 124 bits (313), Expect = 8e-27, Method: Composition-based stats.
Identities = 40/196 (20%), Positives = 75/196 (38%), Gaps = 12/196 (6%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAI 87
+ LL V ++K + + + F +F + + + + L I
Sbjct: 397 MLLLAT------YVFVRKFIALQKITKGNHAFLAIFGELDDPLALHEEEEAFQHSSLWRI 450
Query: 88 FMSAMSEWKKSCDKGARSPIGIQDR-----IDRMMDVAIARELEEITEKLSFLGSMSSAG 142
+ + E ++ ++ S R ++ +D A E +++ + L S G
Sbjct: 451 YCAGYDEVQRCLERANSSKKNALSRASLNYVEAALDRASTNETKKLNGWMMVLTLGISGG 510
Query: 143 LLVGILGAVLGMMGFFQSIAGYYSNNVVS-IPGIIESLISILLGLCVSIPSSIAYNKFIE 201
G+LG V G+M F S+A ++ + PG+ +L L GL V+IP+ AY
Sbjct: 511 PFWGLLGTVWGVMNTFASLAESGEASLAAIAPGVASALACTLFGLLVAIPALFAYTYLAA 570
Query: 202 DSKKFAMQMEGFANEF 217
K + F E
Sbjct: 571 QMKNVNIDTRLFIEEL 586
>gi|228472713|ref|ZP_04057471.1| MotA/TolQ/ExbB family biopolymer transport protein [Capnocytophaga
gingivalis ATCC 33624]
gi|228275764|gb|EEK14530.1| MotA/TolQ/ExbB family biopolymer transport protein [Capnocytophaga
gingivalis ATCC 33624]
Length = 231
Score = 124 bits (312), Expect = 8e-27, Method: Composition-based stats.
Identities = 48/219 (21%), Positives = 96/219 (43%), Gaps = 15/219 (6%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+SI L GLA II +LF+ +S + ++S ++ F + S
Sbjct: 24 LSIMDLIFNGGLANSIIIGILFLMLAMSLYIYFERSFAIGAAKKIDSNFMNVIRDNISSG 83
Query: 71 --TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
K+L +N +A + +S K D I + ++ A + E+ ++
Sbjct: 84 RIEAAKNLCYQYNNPVARLVAKGISRIGKPIDD-----------IHKAIENAGSLEVYKL 132
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA--GYYSNNVVSIPGIIESLISILLGL 186
+ +S L +++ G ++G LG V+GM+ F ++A G ++ + GI ++ + + GL
Sbjct: 133 EKNVSLLATLAGVGPMIGFLGTVVGMVMSFHAMATSGGQADMSILAGGIYTAMTTTVAGL 192
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
V I + +AYN + ++E +F +L+
Sbjct: 193 IVGIVAYLAYNHLVMRINNVTQKLEATTVDFLDMLNEPV 231
>gi|268317077|ref|YP_003290796.1| MotA/TolQ/ExbB proton channel [Rhodothermus marinus DSM 4252]
gi|262334611|gb|ACY48408.1| MotA/TolQ/ExbB proton channel [Rhodothermus marinus DSM 4252]
Length = 238
Score = 124 bits (312), Expect = 9e-27, Method: Composition-based stats.
Identities = 40/223 (17%), Positives = 83/223 (37%), Gaps = 21/223 (9%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS-- 65
+S+ + +Q G I+ + + S+L+ +I+++ + + R+
Sbjct: 21 ATSMSLLDILVQGGW----IMIPIGLLSLLTIYLIVERLITVQRAKTDPRQIMDRVRDYV 76
Query: 66 -GQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARE 124
+ + + + I + + + I ++ A E
Sbjct: 77 EAGDIRGALAYCEAQ-DKPITRILRRGLERLGRPISE-----------IRDAVEAAGKYE 124
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSN--NVVSIPGIIESLISI 182
E+ +++ L S++ ++G LG V GM+ FQ I N V GI E+L++
Sbjct: 125 AFELEKRMDILASIAGIAPMLGFLGTVTGMIEAFQQIQNLQGNVNPSVLAGGIWEALLTT 184
Query: 183 LLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
GL V I + +N + + ME A +F +L
Sbjct: 185 AFGLVVGILALFGHNFLLTRINRLVNDMERSATDFIDLLQEPV 227
>gi|50083746|ref|YP_045256.1| putative biopolymer transport protein (ExbB) [Acinetobacter sp.
ADP1]
gi|49529722|emb|CAG67434.1| putative biopolymer transport protein (ExbB) [Acinetobacter sp.
ADP1]
Length = 207
Score = 124 bits (312), Expect = 9e-27, Method: Composition-based stats.
Identities = 41/211 (19%), Positives = 85/211 (40%), Gaps = 33/211 (15%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
M+ S++ + K + +L SI +W++ I + + L++Q
Sbjct: 1 MNFSVY--WQHADAVSKTLYFVLLAMSIATWTIFILRLMGTRQLKQQA------------ 46
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ K+L L A F E +K+ ++ + I+ E
Sbjct: 47 YAQLSKAL-----SSLKAKFTHLTFEQRKAV-------------AEQALLRQISAEKSNA 88
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISILLGLC 187
+ ++ LG+++S VG+ G V G+ ++ + + + E+LI LGL
Sbjct: 89 EKGVAVLGTIASIAPFVGLFGTVWGIFHALVAVGKSGQAGLAQVATPVGEALIMTGLGLA 148
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFS 218
V+IP+ +AYN + ++ A ++ A+
Sbjct: 149 VAIPAVLAYNICVRFNRGLAHDLQDQAHSLL 179
>gi|262280878|ref|ZP_06058661.1| MotA/TolQ/ExbB proton channel [Acinetobacter calcoaceticus RUH2202]
gi|262257778|gb|EEY76513.1| MotA/TolQ/ExbB proton channel [Acinetobacter calcoaceticus RUH2202]
Length = 206
Score = 124 bits (312), Expect = 9e-27, Method: Composition-based stats.
Identities = 44/211 (20%), Positives = 83/211 (39%), Gaps = 33/211 (15%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
M+ SI+ + K + +L SI +W+V I + + L++Q
Sbjct: 1 MNFSIY--WQHADAVSKTLYFILLAMSIATWTVFILRLMGTRQLKQQAY---------TQ 49
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
L SLK L+ A++E + + I+ E
Sbjct: 50 LSQAITSLKA-KLQPLSFEQRKAVAE--------------------QALLRQISAEKVNA 88
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISILLGLC 187
+ +S LG+++S VG+ G V G+ ++ + + + E+LI LGL
Sbjct: 89 EKGISVLGTIASIAPFVGLFGTVWGIFHALVAVGKSGQAGLAQVATPVGEALIMTGLGLA 148
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFS 218
V+IP+ +AYN + ++ A ++ A+
Sbjct: 149 VAIPAVLAYNICVRANRGLAHDLQDQAHSLL 179
>gi|299065873|emb|CBJ37052.1| biopolymer transport [Ralstonia solanacearum CMR15]
Length = 206
Score = 124 bits (312), Expect = 1e-26, Method: Composition-based stats.
Identities = 42/213 (19%), Positives = 89/213 (41%), Gaps = 17/213 (7%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLR----RQFREFEQLFWSGQS 68
+F++ G I L I S+L+ ++II++ V + + + E + ++
Sbjct: 1 MFSIIQAAGWP----IWPLLIASVLALALIIERFVALQRKKIIPPKVYDEALAVAHQRKA 56
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
V +L+ L + +A+ P ++ +++ A +
Sbjct: 57 TPEVVNTLEQ--GSPLGRVLAAALRHV-------VLHPATTREAAKEVVEEAGQNVSHRL 107
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCV 188
L+ LG+++S L+G+ G V+GM+ F S +N GI +L + LGL V
Sbjct: 108 ERYLNALGTIASVAPLMGLFGTVIGMIEIFGSQTAAGTNPQALAHGISVALYNTALGLVV 167
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+IP+ I + F + +++E + + +
Sbjct: 168 AIPTLIFWRYFRGVVDSYVVELEHLSATYLDAI 200
>gi|207721748|ref|YP_002252187.1| biopolymer transport exbb-like protein [Ralstonia solanacearum
MolK2]
gi|206586912|emb|CAQ17497.1| biopolymer transport exbb-like protein [Ralstonia solanacearum
MolK2]
Length = 206
Score = 124 bits (312), Expect = 1e-26, Method: Composition-based stats.
Identities = 42/213 (19%), Positives = 89/213 (41%), Gaps = 17/213 (7%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLR----RQFREFEQLFWSGQS 68
+F++ G I L I S+L+ ++II++ V + + + E + ++
Sbjct: 1 MFSIIQAAGWP----IWPLLIASVLALALIIERFVALQRKKIIPPKVYDEALAVAHQRKA 56
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
V +L+ L + +A+ P ++ +++ A +
Sbjct: 57 TPEVVNTLEQ--GSPLGRVLAAALRHV-------VLHPATTREAAKEVVEEAGQNVAHRL 107
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCV 188
L+ LG+++S L+G+ G V+GM+ F S +N GI +L + LGL V
Sbjct: 108 ERYLNALGTIASVAPLMGLFGTVVGMIEIFGSQTAAGTNPQTLAHGISVALYNTALGLVV 167
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+IP+ I + F + +++E + + +
Sbjct: 168 AIPTLIFWRYFRGVVDNYVVELEHLSATYLDAI 200
>gi|326336141|ref|ZP_08202313.1| MotA/TolQ/ExbB proton channel family protein [Capnocytophaga sp.
oral taxon 338 str. F0234]
gi|325691650|gb|EGD33617.1| MotA/TolQ/ExbB proton channel family protein [Capnocytophaga sp.
oral taxon 338 str. F0234]
Length = 241
Score = 124 bits (312), Expect = 1e-26, Method: Composition-based stats.
Identities = 47/219 (21%), Positives = 95/219 (43%), Gaps = 15/219 (6%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+SI L GLA II +LF+ + + +++ +R F + S
Sbjct: 34 LSIMQLIFDGGLANTIIIGILFLMLATALYIYFERTFAIGAAKRIDTNFMNVIRDNISSG 93
Query: 71 --TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
K+L +N +A + +S K D I + ++ A + E+ ++
Sbjct: 94 RIDAAKNLCYQYNSPVARLVSKGLSRIGKPIDD-----------IRKAIENAGSLEVYKL 142
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA--GYYSNNVVSIPGIIESLISILLGL 186
+ +S L +++ G ++G LG V+GM+ F ++A G ++ + GI ++ + + GL
Sbjct: 143 EKNVSLLATLAGVGPMIGFLGTVVGMVMSFHAMATSGGQADMTILAGGIYTAMTTTVAGL 202
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
V I + +AYN + ++E +F +L+
Sbjct: 203 IVGIVAYLAYNHLVMRINNVTQKLEATTVDFLDMLNEPV 241
>gi|332283507|ref|YP_004415418.1| transport protein ExbB2 [Pusillimonas sp. T7-7]
gi|330427460|gb|AEC18794.1| transport protein ExbB2 [Pusillimonas sp. T7-7]
Length = 654
Score = 124 bits (311), Expect = 1e-26, Method: Composition-based stats.
Identities = 57/216 (26%), Positives = 99/216 (45%), Gaps = 8/216 (3%)
Query: 16 LFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS-GQSLETVCK 74
LF + L I+ +L + SW ++ +KS N L + F + F GQ LE +
Sbjct: 402 LFSAVPLDAWIILAVLAFMMVQSWIIMARKSRNAARLNQANGRFREAFSKVGQRLELLAD 461
Query: 75 S---LKNHHNIGLAAIFMSAMSEWKKSCDKGARSP---IGIQDRIDRMMDVAIARELEEI 128
+ + L ++ A++E + +G + + + I MD RE +++
Sbjct: 462 DKNLASSLKDSSLWRLYQVAINEIRTRRAQGVDTSMVSVATIESIRASMDAVRTRENQQL 521
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
KL L + + G +G+LG VLG+M F A N+ PG+ +L++ GL
Sbjct: 522 GAKLGILSNAIAGGPYIGLLGTVLGIMVVFLGTAMAGDVNINAIAPGMAAALLATAAGLF 581
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
V+IP+ YN+ I +K+ + M F +EF L+
Sbjct: 582 VAIPALFGYNRIISRNKEISADMRVFVDEFVTRLAE 617
>gi|253582118|ref|ZP_04859342.1| biopolymer transport exbB protein [Fusobacterium varium ATCC 27725]
gi|251836467|gb|EES65004.1| biopolymer transport exbB protein [Fusobacterium varium ATCC 27725]
Length = 203
Score = 124 bits (311), Expect = 1e-26, Method: Composition-based stats.
Identities = 45/202 (22%), Positives = 91/202 (45%), Gaps = 15/202 (7%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFI-----TLRRQFREFEQLFWSGQSLETVCKSLKNHHNI 82
+ + SI+ +V+I++ + F + R E QL G E + L N+
Sbjct: 11 MYFILAMSIIGLAVVIERFIYFKLSEKDSFNRINPELRQLIEKGSIKEAIV--LLNNKKA 68
Query: 83 GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAG 142
A + + ++ KS ++ P ++++ + ++ + + + L ++
Sbjct: 69 SAARVLKDILIQYYKS---NSKDPTMLEEKG----KESAMVQIPLLEKHMWILSLVAHIT 121
Query: 143 LLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIE 201
L+G+LG V GM+ FQ+++ + + + V GI E+L + GL V+IP++I YN F +
Sbjct: 122 PLLGLLGTVTGMIKAFQAVSIHGTGDASVLAKGISEALFTTAGGLFVAIPATIFYNYFNK 181
Query: 202 DSKKFAMQMEGFANEFSAILSR 223
+ ME + E R
Sbjct: 182 KIDETINDMEKTSTELINYFRR 203
>gi|330955709|gb|EGH55969.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae Cit 7]
Length = 138
Score = 124 bits (311), Expect = 1e-26, Method: Composition-based stats.
Identities = 31/117 (26%), Positives = 59/117 (50%), Gaps = 1/117 (0%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
QD ++R + I +E + + L S+ S +G+ G V G++ +I+ S ++
Sbjct: 3 QDLLERSLRQQIHKERRRLESGMILLASIGSTAPFIGLFGTVFGIIHALTAISQARSASI 62
Query: 170 VSIPG-IIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+ G I E+L++ +G+ V++P+ +AYN F K +E FA +F + R
Sbjct: 63 AVVAGPIGEALVATGVGIAVAVPAVLAYNFFGRRLKLVIADLEEFAVDFLNLSQRNA 119
>gi|299771664|ref|YP_003733690.1| MotA/TolQ/ExbB proton channel [Acinetobacter sp. DR1]
gi|298701752|gb|ADI92317.1| MotA/TolQ/ExbB proton channel [Acinetobacter sp. DR1]
Length = 206
Score = 124 bits (311), Expect = 1e-26, Method: Composition-based stats.
Identities = 44/211 (20%), Positives = 83/211 (39%), Gaps = 33/211 (15%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
M+ SI+ + K + +L SI +W+V I + + L++Q
Sbjct: 1 MNFSIY--WQHADAVSKTLYFILLAMSIATWTVFILRLMGTRQLKQQAYA---------Q 49
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
L SLK L+ A++E + + I+ E
Sbjct: 50 LSQAITSLKA-KLQPLSFEQRKAVAE--------------------QALLRQISAEKVNA 88
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISILLGLC 187
+ +S LG+++S VG+ G V G+ ++ + + + E+LI LGL
Sbjct: 89 EKGISVLGTIASIAPFVGLFGTVWGIFHALVAVGKSGQAGLAQVATPVGEALIMTGLGLA 148
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFS 218
V+IP+ +AYN + ++ A ++ A+
Sbjct: 149 VAIPAVLAYNICVRANRGLAHDLQDQAHSLL 179
>gi|17547247|ref|NP_520649.1| biopolymer transport EXBB-like transmembrane protein [Ralstonia
solanacearum GMI1000]
gi|17429549|emb|CAD16235.1| probable biopolymer transport exbb-like transmembrane protein
[Ralstonia solanacearum GMI1000]
Length = 206
Score = 124 bits (311), Expect = 1e-26, Method: Composition-based stats.
Identities = 42/213 (19%), Positives = 89/213 (41%), Gaps = 17/213 (7%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLR----RQFREFEQLFWSGQS 68
+F++ G I L I S+L+ ++II++ V + + + E + ++
Sbjct: 1 MFSIIQAAGWP----IWPLLIASVLALALIIERFVALQRKKIIPPKVYDEALAVAHQRKA 56
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
V +L+ L + +A+ P ++ +++ A +
Sbjct: 57 TPEVVNTLEQ--GSPLGRVLAAALRHV-------VLHPATTREAAKEVVEEAGQNVAHRL 107
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCV 188
L+ LG+++S L+G+ G V+GM+ F S +N GI +L + LGL V
Sbjct: 108 ERYLNALGTIASVAPLMGLFGTVVGMIEIFGSQTAAGTNPQTLAHGISVALYNTALGLVV 167
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+IP+ I + F + +++E + + +
Sbjct: 168 AIPTLIFWRYFRGVVDSYVVELEHLSATYLDAI 200
>gi|224025358|ref|ZP_03643724.1| hypothetical protein BACCOPRO_02097 [Bacteroides coprophilus DSM
18228]
gi|224018594|gb|EEF76592.1| hypothetical protein BACCOPRO_02097 [Bacteroides coprophilus DSM
18228]
Length = 239
Score = 124 bits (311), Expect = 1e-26, Method: Composition-based stats.
Identities = 39/228 (17%), Positives = 91/228 (39%), Gaps = 19/228 (8%)
Query: 3 NYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQL 62
+++++ + + G I+ +L + S++++ + +++V ++ F
Sbjct: 26 PVTSGEPEMNLWDMACKGGW----IMIVLALMSVIAFYIFFERAVTIRKAGKEDPLFMDR 81
Query: 63 FWSGQSLETVCKSLK--NHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVA 120
V ++ N A + + + + ++
Sbjct: 82 IRDYIKSGEVKSAINYCRMINTPSARMIEKGIMRMNRPVAD-----------VQAAIENT 130
Query: 121 IARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI--PGIIES 178
E+ ++ LS + ++S ++G LG V GM+ F ++A +N +++ GI E+
Sbjct: 131 GNIEVAKLENGLSIIATISGGAPMLGFLGTVTGMVQAFWNMANAGNNIDITLLSSGIYEA 190
Query: 179 LISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+I+ + GL V I + AYN + K QME F +L+ +
Sbjct: 191 MITTVGGLVVGIATMFAYNHLVYRVDKVVSQMEARTIAFMDLLNEPND 238
>gi|330955761|gb|EGH56021.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae Cit 7]
Length = 143
Score = 123 bits (310), Expect = 1e-26, Method: Composition-based stats.
Identities = 32/115 (27%), Positives = 64/115 (55%), Gaps = 1/115 (0%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
QDR++R + I RE + L+ L S+ S +G+ G V G+M + I+ S ++
Sbjct: 1 QDRLERALRQQIVRERRSLETGLAILASIGSTSPFIGLFGTVWGIMSALKGISAAGSASL 60
Query: 170 VSIPG-IIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
++ G I +L++ +G+ V++P+ + YN F+ K A ++ FA++F ++ +
Sbjct: 61 ETVAGPIGAALVATGVGIAVAVPAVLIYNYFLRRLKLTAADLDDFAHDFYSLAQK 115
>gi|300703205|ref|YP_003744807.1| biopolymer transport [Ralstonia solanacearum CFBP2957]
gi|299070868|emb|CBJ42170.1| biopolymer transport [Ralstonia solanacearum CFBP2957]
Length = 206
Score = 123 bits (310), Expect = 2e-26, Method: Composition-based stats.
Identities = 42/213 (19%), Positives = 89/213 (41%), Gaps = 17/213 (7%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLR----RQFREFEQLFWSGQS 68
+F++ G I L I S+L+ ++II++ V + + + E + ++
Sbjct: 1 MFSIIQAAGWP----IWPLLIASVLALALIIERFVALQRKKIIPPKVYDEALAVAHQRKA 56
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
V +L+ L + +A+ P ++ +++ A +
Sbjct: 57 TPEVVNTLEQ--GSPLGRVLAAALRHV-------VLHPATTREAAKEVVEEAGQNVAHRL 107
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCV 188
L+ LG+++S L+G+ G V+GM+ F S +N GI +L + LGL V
Sbjct: 108 ERYLNALGTIASVAPLMGLFGTVVGMIEIFGSQTAAGTNPQTLAHGISVALYNTALGLVV 167
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+IP+ I + F + +++E + + +
Sbjct: 168 AIPTLIFWRYFRGVVDNYVVELEHLSATYLDAI 200
>gi|108756839|ref|YP_629081.1| MotA/TolQ/ExbB proton channel family protein [Myxococcus xanthus DK
1622]
gi|108460719|gb|ABF85904.1| MotA/TolQ/ExbB proton channel family protein [Myxococcus xanthus DK
1622]
Length = 226
Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats.
Identities = 45/207 (21%), Positives = 94/207 (45%), Gaps = 18/207 (8%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLA 85
++ +L S+LS +++++++V F R E + S L+ V +++ G+
Sbjct: 32 WVLWVLVCLSVLSIAIMLERTVYFARHRLPDSEALAVRLSRGELDAVKAAIQGRQ--GME 89
Query: 86 AIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLV 145
A + + E D+GA D +++++ ++RE LS+LG++ + +
Sbjct: 90 A---AILREGLACADQGA-------DTVEQVIASTLSRERPRYERFLSYLGTLGNNAPFI 139
Query: 146 GILGAVLGMMGFFQSIA------GYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKF 199
G+ G VLG++ F + G + + GI E+L++ +GL V+IP+ +A+N F
Sbjct: 140 GLFGTVLGIIKAFNDLGKMNAQGGGGAMQQTVMAGISEALVATAVGLAVAIPAVVAFNVF 199
Query: 200 IEDSKKFAMQMEGFANEFSAILSRQTE 226
K + + L +
Sbjct: 200 SRQLKTLTSRANALGHALVGSLRSEAR 226
>gi|260549123|ref|ZP_05823344.1| biopolymer transporter [Acinetobacter sp. RUH2624]
gi|260407851|gb|EEX01323.1| biopolymer transporter [Acinetobacter sp. RUH2624]
Length = 206
Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats.
Identities = 44/211 (20%), Positives = 83/211 (39%), Gaps = 33/211 (15%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
M+ SI+ + K + +L SI +W+V I + + L++Q
Sbjct: 1 MNFSIY--WQHADAVSKTLYFILLAMSIATWTVFILRLMGTRQLKQQAYA---------Q 49
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
L SLK L+ A++E + + I+ E
Sbjct: 50 LSKAISSLKA-KLQPLSFEQRKAVAE--------------------QALLRQISAEKVNA 88
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISILLGLC 187
+ +S LG+++S VG+ G V G+ ++ + + + E+LI LGL
Sbjct: 89 EKGISVLGTIASIAPFVGLFGTVWGIFHALVAVGKSGQAGLAQVATPVGEALIMTGLGLA 148
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFS 218
V+IP+ +AYN + ++ A ++ A+
Sbjct: 149 VAIPAVLAYNICVRANRGLAHDLQDQAHSLL 179
>gi|260550093|ref|ZP_05824307.1| biopolymer transporter [Acinetobacter sp. RUH2624]
gi|260406848|gb|EEX00327.1| biopolymer transporter [Acinetobacter sp. RUH2624]
Length = 211
Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats.
Identities = 44/213 (20%), Positives = 99/213 (46%), Gaps = 21/213 (9%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
++ L G + L + SIL+ ++ I++ + + + + +
Sbjct: 1 MWELVKAGGWL----MLPLILCSILTVAISIERFIRLRRSQVLPKALMSD--GSADISHI 54
Query: 73 CKSLKNH---HNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+L+ + L I + E ++ ++ AR+ M+ ++E+ +
Sbjct: 55 ITNLEQDTDASSTALGNILKAGF-EHQEHGEQFARAQ----------MEAMASQEISYLE 103
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA-GYYSNNVVSIPGIIESLISILLGLCV 188
+ ++FLG++S+ L+G+LG V+G++ F I G + + IPGI ++LI+ +G+ +
Sbjct: 104 KNINFLGTLSAIAPLLGLLGTVVGIIESFLVIDFGSAGSPSLMIPGISKALITTAVGMLI 163
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+IP+ I+Y F + + ++E + F A L
Sbjct: 164 AIPALISYRYFQRVVQNYIAELEQQSTLFHASL 196
>gi|119897759|ref|YP_932972.1| biopolymer transport protein ExbB [Azoarcus sp. BH72]
gi|119670172|emb|CAL94085.1| conserved hypothetical biopolymer transport protein ExbB [Azoarcus
sp. BH72]
Length = 202
Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats.
Identities = 47/215 (21%), Positives = 89/215 (41%), Gaps = 13/215 (6%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
+F + G I L + S+++ ++II++SV+ R L+ V
Sbjct: 1 MFEIIQAAGWP----IWPLLLASVIAVALIIERSVSLRRAR---------VVPAGLLDKV 47
Query: 73 CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKL 132
L++H ++A S + G R+ +D + ++ + E+ L
Sbjct: 48 LVDLRSHGASAEMINRVAAHSPLGRVLAAGLRNIGASRDVMKESIEETGRAVVHELERFL 107
Query: 133 SFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPS 192
+ LG+++S L+G+ G V+GM+ F S +N GI +L + GL ++IP+
Sbjct: 108 TTLGTIASVAPLLGLFGTVIGMIEIFASQGISGANTAQLAHGISLALYATGFGLVIAIPT 167
Query: 193 SIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEG 227
I + F F + ME A + + G
Sbjct: 168 MIFWRHFRRLIDDFVIDMEQQAIKLVEVAQGDRRG 202
>gi|296535156|ref|ZP_06897383.1| TolQ protein [Roseomonas cervicalis ATCC 49957]
gi|296264519|gb|EFH10917.1| TolQ protein [Roseomonas cervicalis ATCC 49957]
Length = 171
Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats.
Identities = 39/141 (27%), Positives = 68/141 (48%), Gaps = 2/141 (1%)
Query: 85 AAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLL 144
A + + EW+ ++G S + R++ M + EL + L FL + +
Sbjct: 16 ARVLRAGTREWRDGREQG-ESRFEYRHRMEHAMRHVLTIELRRVEPGLPFLATTGAVAPF 74
Query: 145 VGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDS 203
+G+ G V G+M F IA ++ V PGI E+L + +GL +IP+ +AYN+ +
Sbjct: 75 IGLFGTVWGIMNSFAGIAQSNDTSLAVVAPGIAEALFATAIGLIAAIPAVMAYNRLLVRL 134
Query: 204 KKFAMQMEGFANEFSAILSRQ 224
+ + A E +A LSR+
Sbjct: 135 GRLRQDGQAAATELAAGLSRR 155
>gi|149196305|ref|ZP_01873360.1| Biopolymer transport protein [Lentisphaera araneosa HTCC2155]
gi|149140566|gb|EDM28964.1| Biopolymer transport protein [Lentisphaera araneosa HTCC2155]
Length = 236
Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats.
Identities = 49/220 (22%), Positives = 92/220 (41%), Gaps = 18/220 (8%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS-LE 70
S + F+ + I+ LLF+ SI+SW ++++K + T + + + S L
Sbjct: 6 SPYYYFLMSDNFGRFIVLLLFLVSIVSWFLMLEKWIEVKTALKNAFQLKSQLQDRGSCLL 65
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGI--------------QDRIDRM 116
+ + H IG ++ SA + + + + +
Sbjct: 66 KCTQEFNSDHPIG--KVYTSANHQLISLLHTNEHELLSFAHDNLLPRQISSIEIESVRKS 123
Query: 117 MDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII 176
M+ A+ E+ K+S L ++ S G+LG V G+M F +A + S N+ +I I
Sbjct: 124 MEQAVNDEILRYEGKMSSLSTIVSVSPFCGLLGTVYGVMTSFGGMAEHGSANIAAIAPGI 183
Query: 177 ES-LISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFAN 215
L++ + GL V+IPS + YN + M+ F +
Sbjct: 184 AGALLTTVAGLLVAIPSVVGYNLLTAKIRTLISHMDNFTD 223
>gi|213157114|ref|YP_002319159.1| MotA/TolQ/ExbB proton channel [Acinetobacter baumannii AB0057]
gi|213056274|gb|ACJ41176.1| MotA/TolQ/ExbB proton channel [Acinetobacter baumannii AB0057]
Length = 211
Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats.
Identities = 46/213 (21%), Positives = 99/213 (46%), Gaps = 21/213 (9%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
++ L G + L + SIL+ ++ I++ V + + + V
Sbjct: 1 MWELVKAGGWL----MLPLILCSILTVAISIERFVRLRRSQVLPKVLMND--GSADISVV 54
Query: 73 CKSLKNH---HNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+L+ + L I + E ++ ++ AR+ M+ ++E+ +
Sbjct: 55 ITNLEQDTNAQSTALGNILKAGF-EHQEHGEQFARAQ----------MEAMASQEISYLE 103
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA-GYYSNNVVSIPGIIESLISILLGLCV 188
+ ++FLG++S+ L+G+LG V+G++ F I G + + IPGI ++LI+ +G+ +
Sbjct: 104 KNINFLGTLSAIAPLLGLLGTVVGIIESFWFIDFGSAGSPSLMIPGISKALITTAVGMLI 163
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+IP+ I+Y F + + ++E + F A L
Sbjct: 164 AIPALISYRYFQRVVQDYIAELEQQSTLFHASL 196
>gi|198277582|ref|ZP_03210113.1| hypothetical protein BACPLE_03804 [Bacteroides plebeius DSM 17135]
gi|198270080|gb|EDY94350.1| hypothetical protein BACPLE_03804 [Bacteroides plebeius DSM 17135]
Length = 239
Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats.
Identities = 41/229 (17%), Positives = 93/229 (40%), Gaps = 21/229 (9%)
Query: 3 NYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQL 62
++++ + + G I+ +L + S++++ + +++V + F
Sbjct: 26 PVASGEPQMNLWDMACKGGW----IMIVLALMSVIAFYIFFERAVAIRKAGKDDPLFMDR 81
Query: 63 FW---SGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDV 119
+++ + N A + ++ + + ++
Sbjct: 82 IRDYIKSGEIKSAINYCR-ITNTPSARMIEKGITRMGRPVAD-----------VQAAIEN 129
Query: 120 AIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI--PGIIE 177
E+ ++ LS + ++SS ++G LG V GM+ F ++A +N +++ GI E
Sbjct: 130 TGNIEVAKLENGLSIMATISSGAPMLGFLGTVTGMVRAFWNMANAGNNIDITLLSSGIYE 189
Query: 178 SLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
++I+ + GL V I + AYN + K QME F +L+ TE
Sbjct: 190 AMITTVGGLVVGIATMFAYNHLVYRVDKVVSQMEARTLAFMDLLNEPTE 238
>gi|257469132|ref|ZP_05633226.1| biopolymer transport exbB protein [Fusobacterium ulcerans ATCC
49185]
gi|317063379|ref|ZP_07927864.1| biopolymer transport exbB protein [Fusobacterium ulcerans ATCC
49185]
gi|313689055|gb|EFS25890.1| biopolymer transport exbB protein [Fusobacterium ulcerans ATCC
49185]
Length = 203
Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats.
Identities = 45/202 (22%), Positives = 91/202 (45%), Gaps = 15/202 (7%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQ-----FREFEQLFWSGQSLETVCKSLKNHHNI 82
+ + SI+ +V+I++ + F R E QL G E + L N+
Sbjct: 11 MYFILAMSIIGLAVVIERFIYFKLSERDSFNKINPELRQLIEKGSVKEAIV--LLNNQKA 68
Query: 83 GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAG 142
A + + ++ KS ++ P+ ++++ + ++ + + + L ++
Sbjct: 69 SAARVLKDILIQYYKS---NSKDPVMLEEKG----KESAMAQVPLLEKHMWMLSLVAHIT 121
Query: 143 LLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIE 201
L+G+LG V GM+ FQ+++ + + + V GI E+L + GL V+IP++I YN F +
Sbjct: 122 PLLGLLGTVTGMIKAFQAVSVHGTGDASVLAKGISEALFTTAGGLFVAIPATIFYNYFNK 181
Query: 202 DSKKFAMQMEGFANEFSAILSR 223
+ ME + E R
Sbjct: 182 KIDETINDMEKTSTELINYFRR 203
>gi|169633832|ref|YP_001707568.1| putative biopolymer transport protein (ExbB) [Acinetobacter
baumannii SDF]
gi|169634450|ref|YP_001708186.1| putative biopolymer transport protein (ExbB) [Acinetobacter
baumannii SDF]
gi|169797295|ref|YP_001715088.1| putative biopolymer transport protein (ExbB) [Acinetobacter
baumannii AYE]
gi|184156783|ref|YP_001845122.1| biopolymer transport protein [Acinetobacter baumannii ACICU]
gi|213155895|ref|YP_002317940.1| MotA/TolQ/ExbB proton channel [Acinetobacter baumannii AB0057]
gi|239500814|ref|ZP_04660124.1| MotA/TolQ/ExbB proton channel [Acinetobacter baumannii AB900]
gi|293610249|ref|ZP_06692550.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|301346584|ref|ZP_07227325.1| MotA/TolQ/ExbB proton channel [Acinetobacter baumannii AB056]
gi|301511041|ref|ZP_07236278.1| MotA/TolQ/ExbB proton channel [Acinetobacter baumannii AB058]
gi|301596903|ref|ZP_07241911.1| MotA/TolQ/ExbB proton channel [Acinetobacter baumannii AB059]
gi|332853006|ref|ZP_08434516.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Acinetobacter baumannii 6013150]
gi|332866456|ref|ZP_08437025.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Acinetobacter baumannii 6013113]
gi|332873196|ref|ZP_08441153.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Acinetobacter baumannii 6014059]
gi|169150222|emb|CAM88118.1| putative biopolymer transport protein (ExbB) [Acinetobacter
baumannii AYE]
gi|169152624|emb|CAP01615.1| putative biopolymer transport protein (ExbB) [Acinetobacter
baumannii]
gi|169153242|emb|CAP02342.1| putative biopolymer transport protein (ExbB) [Acinetobacter
baumannii]
gi|183208377|gb|ACC55775.1| Biopolymer transport protein [Acinetobacter baumannii ACICU]
gi|193076269|gb|ABO10908.2| putative biopolymer transport protein (ExbB) [Acinetobacter
baumannii ATCC 17978]
gi|213055055|gb|ACJ39957.1| MotA/TolQ/ExbB proton channel [Acinetobacter baumannii AB0057]
gi|292827481|gb|EFF85845.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|322506675|gb|ADX02129.1| ExbB [Acinetobacter baumannii 1656-2]
gi|323516550|gb|ADX90931.1| biopolymer transport protein [Acinetobacter baumannii TCDC-AB0715]
gi|325124428|gb|ADY83951.1| MotA/TolQ/ExbB proton channel [Acinetobacter calcoaceticus PHEA-2]
gi|332728942|gb|EGJ60297.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Acinetobacter baumannii 6013150]
gi|332734613|gb|EGJ65720.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Acinetobacter baumannii 6013113]
gi|332738708|gb|EGJ69578.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Acinetobacter baumannii 6014059]
Length = 206
Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats.
Identities = 44/211 (20%), Positives = 83/211 (39%), Gaps = 33/211 (15%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
M+ SI+ + K + +L SI +W+V I + + L++Q
Sbjct: 1 MNFSIY--WQHADAVSKTLYFILLAMSIATWTVFILRLMGTRQLKQQAYA---------Q 49
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
L SLK L+ A++E + + I+ E
Sbjct: 50 LSQAITSLKA-KLQPLSFEQRKAVAE--------------------QALLRQISAEKANA 88
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISILLGLC 187
+ +S LG+++S VG+ G V G+ ++ + + + E+LI LGL
Sbjct: 89 DKGISVLGTIASIAPFVGLFGTVWGIFHALVAVGKSGQAGLAQVATPVGEALIMTGLGLA 148
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFS 218
V+IP+ +AYN + ++ A ++ A+
Sbjct: 149 VAIPAVLAYNICVRANRGLAHDLQDQAHSLL 179
>gi|329910417|ref|ZP_08275302.1| Ferric siderophore transport system, biopolymer transport protein
ExbB [Oxalobacteraceae bacterium IMCC9480]
gi|327546185|gb|EGF31231.1| Ferric siderophore transport system, biopolymer transport protein
ExbB [Oxalobacteraceae bacterium IMCC9480]
Length = 201
Score = 122 bits (308), Expect = 2e-26, Method: Composition-based stats.
Identities = 42/214 (19%), Positives = 91/214 (42%), Gaps = 21/214 (9%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLR----RQFREFEQLFWSGQS 68
+FA+ G I L I S++ ++I+++ + R + +E +++ +G+
Sbjct: 1 MFAIIQAAGWP----IWPLLIASVIGLALIVERLLYLRRSRVLPAKLLQEVIRVYHNGKI 56
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ +L+ + +G + G R+ +D + ++ A E+
Sbjct: 57 NAEILANLEQNSPLG-------------QVLAAGLRNVDAPRDIMKESIEEAGMASAHEL 103
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCV 188
L+ LG++++ L+G+ G V+GM+ F + +N GI +L + GL +
Sbjct: 104 ERFLTTLGTIATLAPLMGLFGTVVGMIEIFGAQNATGANPAQLAHGISVALYNTGFGLAI 163
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
++P+ + Y F F + ME A F +
Sbjct: 164 AMPALVFYRHFRALVDSFVVDMEQQAVRFVDTVH 197
>gi|330947371|gb|EGH48043.1| biopolymer transport protein ExbB [Pseudomonas syringae pv. pisi
str. 1704B]
Length = 138
Score = 122 bits (308), Expect = 3e-26, Method: Composition-based stats.
Identities = 33/115 (28%), Positives = 61/115 (53%), Gaps = 1/115 (0%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
QD ++R + I +E + + L S+ S +G+ G V G+M QSI S ++
Sbjct: 3 QDLLERSLRQQIHKERRRLESGMILLASIGSTAPFIGLFGTVWGIMEALQSIGVTGSASL 62
Query: 170 VSIPG-IIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
++ G I +L++ +G+ V++P+ + YN F+ K M+ FA++F A+ R
Sbjct: 63 EAVAGPIGHALVATGVGIAVAVPAVLIYNFFLRRLKLAVADMDDFAHDFDALAQR 117
>gi|253583882|ref|ZP_04861080.1| biopolymer transport exbB protein [Fusobacterium varium ATCC 27725]
gi|251834454|gb|EES63017.1| biopolymer transport exbB protein [Fusobacterium varium ATCC 27725]
Length = 209
Score = 122 bits (308), Expect = 3e-26, Method: Composition-based stats.
Identities = 48/195 (24%), Positives = 97/195 (49%), Gaps = 8/195 (4%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQ-FREFEQLFWSGQSLETVCKSLKNHHNIGLAA 86
+ LL + SIL I++++ F+ + +EF++ S + ++ K + L
Sbjct: 12 MWLLAVLSILGLGTILERTAYFMKNEQGITKEFKEEIVS------LVRAGKEKEAMELCD 65
Query: 87 IFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVG 146
+++S KS ++ + + +++M ++E + +LS LG ++ + G
Sbjct: 66 KTNNSVSRTVKSILLAYQNEDDLYESKEKLMKEKALEQIENLERRLSILGIVAYISPMAG 125
Query: 147 ILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKK 205
+LG VLGM+ F++IA + + V GI E+L++ GL ++IP+ IAYN F + K
Sbjct: 126 LLGTVLGMIKSFKAIALQGAGDPNVVANGISEALLTTAAGLLIAIPAIIAYNTFNRKADK 185
Query: 206 FAMQMEGFANEFSAI 220
+++E + I
Sbjct: 186 VMLEIEKTSTALINI 200
>gi|255321186|ref|ZP_05362352.1| transporter, MotA/TolQ/ExbB proton channel family [Acinetobacter
radioresistens SK82]
gi|262380128|ref|ZP_06073283.1| TolQ [Acinetobacter radioresistens SH164]
gi|255301740|gb|EET80991.1| transporter, MotA/TolQ/ExbB proton channel family [Acinetobacter
radioresistens SK82]
gi|262298322|gb|EEY86236.1| TolQ [Acinetobacter radioresistens SH164]
Length = 208
Score = 122 bits (308), Expect = 3e-26, Method: Composition-based stats.
Identities = 42/223 (18%), Positives = 85/223 (38%), Gaps = 33/223 (14%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
M+ S++ + K + +L SI +W++ I + + L++Q
Sbjct: 1 MNFSVY--WQHADAVSKTLYFVLLAMSIATWTIFILRLMGTRQLKQQAYA---------Q 49
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
L LK K G + ++ + I+ E
Sbjct: 50 LSQALAKLK------------------TKLAPLGFEQRKAVAEQ---ALLRQISAEKASA 88
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISILLGLC 187
+ ++ LG+++S VG+ G V G+ ++ + + + E+LI LGL
Sbjct: 89 EKGVAVLGTIASIAPFVGLFGTVWGIFHALVAVGKSGQAGLAQVATPVGEALIMTGLGLA 148
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
V+IP+ +AYN + ++ A ++ A+ Q + N+S
Sbjct: 149 VAIPAVLAYNIAVRFNRGLAHDLQDQAHSLLIDTMLQQDSNVS 191
>gi|283780563|ref|YP_003371318.1| MotA/TolQ/ExbB proton channel [Pirellula staleyi DSM 6068]
gi|283439016|gb|ADB17458.1| MotA/TolQ/ExbB proton channel [Pirellula staleyi DSM 6068]
Length = 327
Score = 122 bits (308), Expect = 3e-26, Method: Composition-based stats.
Identities = 49/203 (24%), Positives = 96/203 (47%), Gaps = 6/203 (2%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLK--NHHNIGLA 85
+ L I I++ VII+++ + L + E S + + ++L +
Sbjct: 103 MWPLLIMGIVALGVIIERTRALLMLGSRQEELRTEVRSLLEKDQIEEALAKCEETKGPVP 162
Query: 86 AIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLV 145
AI + + ++ + G I++++ + MD + + + L L ++SSA +V
Sbjct: 163 AILGAGLKKYLVARRLGY-DAAKIEEQVVKGMDDYSVHVVAALEKHLPILATISSAAPMV 221
Query: 146 GILGAVLGMMGFFQSIA---GYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIED 202
G LG V GM+ F I G + + GI+ SL++ +LGL V IP+ +A+N F
Sbjct: 222 GFLGTVQGMVVSFDDIVKHMGEKNIVEAAAGGIMVSLLTTVLGLIVGIPAYVAFNYFTSV 281
Query: 203 SKKFAMQMEGFANEFSAILSRQT 225
+ +F +++E A+E ++ Q
Sbjct: 282 TNRFVLEVEESASELIESVTFQL 304
>gi|83645477|ref|YP_433912.1| biopolymer transport protein [Hahella chejuensis KCTC 2396]
gi|83633520|gb|ABC29487.1| Biopolymer transport protein [Hahella chejuensis KCTC 2396]
Length = 211
Score = 122 bits (308), Expect = 3e-26, Method: Composition-based stats.
Identities = 37/206 (17%), Positives = 89/206 (43%), Gaps = 10/206 (4%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLA 85
I+ + + S+++ ++II++ + R + LK G
Sbjct: 10 LIMIPILLCSVVALAIIIERFWTLRPQKVAPRSIV---------NDLMARLKKKELNGKT 60
Query: 86 AIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLV 145
+ + + G + ++ + ++ + + E+ L+ LGS+++ L+
Sbjct: 61 LKDLQQSTPLGRVLAAGLINAKHGREIMKESIEEEASHVVHELERFLTALGSVAAITPLL 120
Query: 146 GILGAVLGMMGFFQSIAGYYSNNVVS-IPGIIESLISILLGLCVSIPSSIAYNKFIEDSK 204
G+LG V+GM+ F I + N + GI ++LI+ +GL ++IP+ + + F
Sbjct: 121 GLLGTVIGMIDVFAEIQIAGTGNTQALAGGISKALITTAVGLTIAIPALVCHRYFQRRVD 180
Query: 205 KFAMQMEGFANEFSAILSRQTEGNIS 230
+ ++ME A + ++ + ++S
Sbjct: 181 ELVVEMEQQALKLVEVVHGDRDVDMS 206
>gi|184157920|ref|YP_001846259.1| biopolymer transport protein [Acinetobacter baumannii ACICU]
gi|239502203|ref|ZP_04661513.1| biopolymer transport protein [Acinetobacter baumannii AB900]
gi|260555201|ref|ZP_05827422.1| biopolymer transporter [Acinetobacter baumannii ATCC 19606]
gi|332872757|ref|ZP_08440723.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Acinetobacter baumannii 6014059]
gi|183209514|gb|ACC56912.1| Biopolymer transport protein [Acinetobacter baumannii ACICU]
gi|193077188|gb|ABO11980.2| MotA/TolQ/ExbB proton channel [Acinetobacter baumannii ATCC 17978]
gi|260411743|gb|EEX05040.1| biopolymer transporter [Acinetobacter baumannii ATCC 19606]
gi|322508239|gb|ADX03693.1| MotA/TolQ/ExbB proton channel [Acinetobacter baumannii 1656-2]
gi|323517865|gb|ADX92246.1| biopolymer transport protein [Acinetobacter baumannii TCDC-AB0715]
gi|332739054|gb|EGJ69915.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Acinetobacter baumannii 6014059]
Length = 211
Score = 122 bits (307), Expect = 3e-26, Method: Composition-based stats.
Identities = 46/213 (21%), Positives = 99/213 (46%), Gaps = 21/213 (9%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
++ L G + L + SIL+ ++ I++ V + + + V
Sbjct: 1 MWELVKAGGWL----MLPLILCSILTVAISIERFVRLRRSQVLPKVLMND--GSADISVV 54
Query: 73 CKSLKNH---HNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+L+ + L I + E ++ ++ AR+ M+ ++E+ +
Sbjct: 55 ITNLEQDTNAQSTALGNILKAGF-EHQEHGEQFARAQ----------MEAMASQEISYLE 103
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA-GYYSNNVVSIPGIIESLISILLGLCV 188
+ ++FLG++S+ L+G+LG V+G++ F I G + + IPGI ++LI+ +G+ +
Sbjct: 104 KNINFLGTLSAIAPLLGLLGTVVGIIESFLVIDFGSAGSPSLMIPGISKALITTAVGMLI 163
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+IP+ I+Y F + + ++E + F A L
Sbjct: 164 AIPALISYRYFQRVVQDYIAELEQQSTLFHASL 196
>gi|328952316|ref|YP_004369650.1| MotA/TolQ/ExbB proton channel [Desulfobacca acetoxidans DSM 11109]
gi|328452640|gb|AEB08469.1| MotA/TolQ/ExbB proton channel [Desulfobacca acetoxidans DSM 11109]
Length = 224
Score = 122 bits (307), Expect = 3e-26, Method: Composition-based stats.
Identities = 39/202 (19%), Positives = 88/202 (43%), Gaps = 10/202 (4%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLA 85
++ LL + SI+S +++++ + F R + F + + L+ +
Sbjct: 17 WVLWLLVVLSIISVIIMVERGLMFYRCRFNDQAFV---------DELTPLLQTQNWRQAT 67
Query: 86 AIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLV 145
A+ ++ + + G ++ + M+ + + + L+FLG++ + +
Sbjct: 68 ALCENSTAMEPQILLAGLGQVSEGKEAANESMEAERIKAGLLMEKGLNFLGTLGANAPFI 127
Query: 146 GILGAVLGMMGFFQSIAGY-YSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSK 204
G+ G VLG++ F+ +A + GI E+L++ +GL V+IP+ + YN +
Sbjct: 128 GLFGTVLGIIHAFKDLALTEGGGGPAVMAGIAEALVATAVGLLVAIPAVVMYNFYHRRLH 187
Query: 205 KFAMQMEGFANEFSAILSRQTE 226
+ + A LSRQ +
Sbjct: 188 IVLERSQRLGRLLLASLSRQPQ 209
>gi|329963085|ref|ZP_08300865.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Bacteroides fluxus YIT 12057]
gi|328529126|gb|EGF56056.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Bacteroides fluxus YIT 12057]
Length = 238
Score = 122 bits (307), Expect = 3e-26, Method: Composition-based stats.
Identities = 38/225 (16%), Positives = 96/225 (42%), Gaps = 21/225 (9%)
Query: 7 AIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS- 65
A +++++++ ++ G I+ +L + SIL + ++ +++ ++ F
Sbjct: 30 APDEMNLWSMAVKGGW----IMIVLGLMSILCFYILFERNYVIRKAGKEDPLFMDKIKDY 85
Query: 66 --GQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAR 123
G L+ ++ + A + +S + + + ++
Sbjct: 86 ILGGELKAAIAYCRS-VDTPSARMIEKGISRLGRPVND-----------VQAAIENVGNI 133
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI--PGIIESLIS 181
E+ ++ + ++ + ++S ++G LG V GM+ F +A +N +++ GI E++I+
Sbjct: 134 EVAKLEKGMTIMATISGGAPMLGFLGTVTGMVRAFWEMANAGNNIDITMLSGGIYEAMIT 193
Query: 182 ILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+ GL V I + AYN + +ME F +L+ +
Sbjct: 194 TVGGLIVGIIAMFAYNYLVTLIDGVVNKMEAKTMAFMDLLNEPAK 238
>gi|160890801|ref|ZP_02071804.1| hypothetical protein BACUNI_03246 [Bacteroides uniformis ATCC 8492]
gi|317479761|ref|ZP_07938883.1| MotA/TolQ/ExbB proton channel family protein [Bacteroides sp.
4_1_36]
gi|156859800|gb|EDO53231.1| hypothetical protein BACUNI_03246 [Bacteroides uniformis ATCC 8492]
gi|316904131|gb|EFV25963.1| MotA/TolQ/ExbB proton channel family protein [Bacteroides sp.
4_1_36]
Length = 238
Score = 122 bits (307), Expect = 3e-26, Method: Composition-based stats.
Identities = 37/225 (16%), Positives = 97/225 (43%), Gaps = 21/225 (9%)
Query: 7 AIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS- 65
A +++++++ ++ G I+ +L + S+L + ++ +++ ++ +F
Sbjct: 30 ASDEMNLWSMAVKGGW----IMVVLGLMSVLCFYILFERNYVIRKAGKEDPQFMDKIKDY 85
Query: 66 --GQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAR 123
G L+ ++ + A + +S + + + ++
Sbjct: 86 ILGGELKAAIAYCRS-VDTPSARMIEKGISRLGRPVND-----------VQAAIENVGNI 133
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI--PGIIESLIS 181
E+ ++ + ++ + ++S ++G LG V GM+ F +A +N +++ GI E++I+
Sbjct: 134 EVAKLEKGMTIMATISGGAPMLGFLGTVTGMVRAFWQMANAGNNIDITLLSGGIYEAMIT 193
Query: 182 ILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+ GL V I + AYN + +ME F +L+ +
Sbjct: 194 TVGGLIVGIIAMFAYNYLVTLIDGVVNKMEAKTMAFMDLLNEPAK 238
>gi|134095666|ref|YP_001100741.1| putative biopolymer transport exbB-like protein [Herminiimonas
arsenicoxydans]
gi|133739569|emb|CAL62620.1| putative biopolymer transport protein ExbB-like [Herminiimonas
arsenicoxydans]
Length = 203
Score = 122 bits (307), Expect = 3e-26, Method: Composition-based stats.
Identities = 48/216 (22%), Positives = 94/216 (43%), Gaps = 23/216 (10%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLR----RQFREFEQLFWSGQS 68
+ A+ G I LL I S+++ ++II++S+ R E +++ +G+
Sbjct: 1 MLAIIHAAGWP----IWLLLIASVIALTLIIERSLYLRRRRILPPSLLEEVVRVYHNGKI 56
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
V +L+ + +G + G R+ +D + ++ A E+
Sbjct: 57 DANVVATLEKNSPLG-------------RVLAAGLRNVNAPRDVMKESIEEAGRGTAHEL 103
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFF--QSIAGYYSNNVVSIPGIIESLISILLGL 186
L+ LG++++ L+G+ G V+GM+ F Q+ G +N GI +L + GL
Sbjct: 104 ERFLTTLGTIATLAPLMGLFGTVVGMIEIFGSQNATGTGANPTQLAHGISIALYNTGFGL 163
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
+++PS + Y F F + ME A +F +
Sbjct: 164 AIAMPSLVFYRHFRALVDSFIIDMEQQAVKFVDTVH 199
>gi|53729226|ref|ZP_00348353.1| COG0811: Biopolymer transport proteins [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|307257645|ref|ZP_07539404.1| Biopolymer transport ExbB protein [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
gi|306863820|gb|EFM95744.1| Biopolymer transport ExbB protein [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
Length = 164
Score = 122 bits (307), Expect = 4e-26, Method: Composition-based stats.
Identities = 29/153 (18%), Positives = 66/153 (43%), Gaps = 4/153 (2%)
Query: 73 CKSLKNHHNIGLAAIFMSAMSE---WKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
K + ++ I + + ++ + + +D + + AI + L +
Sbjct: 4 AKKYTQNKRSDISEILQTTFKQCELYQLNGKYNLSHQLPFKDFLTLHLRNAITQSLRKYD 63
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCV 188
L L S+ + +G+ G V G+ I+ ++ ++ I E+L++ +GL V
Sbjct: 64 GGLVALASIGAVAPFIGLFGTVWGIFNALMDISQQGQVSIATVSAPIGEALVATAMGLFV 123
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+IP+ +AYN ++ + ++ +ANE L
Sbjct: 124 AIPAVLAYNLIARLNRNLSQDLDHYANELFIYL 156
>gi|182679109|ref|YP_001833255.1| MotA/TolQ/ExbB proton channel [Beijerinckia indica subsp. indica
ATCC 9039]
gi|182634992|gb|ACB95766.1| MotA/TolQ/ExbB proton channel [Beijerinckia indica subsp. indica
ATCC 9039]
Length = 211
Score = 122 bits (307), Expect = 4e-26, Method: Composition-based stats.
Identities = 52/217 (23%), Positives = 86/217 (39%), Gaps = 19/217 (8%)
Query: 6 LAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS 65
+ + IS +LF Q G K ++ +L + S+ W +II+ V+ L++ R S
Sbjct: 1 METLSISPLSLFEQAGPVGKAVMAILLLASVWCWVLIIEALVSVSRLKKAVRLA----RS 56
Query: 66 GQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
G V L I ++ E + RI M A +
Sbjct: 57 GGIHPLVAPLLDAGQKAAATTIPGESVGEARI--------------RIAEAMHRAAQTIM 102
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILL 184
++ L L +SS VG+ G V G+M F IA ++ V PGI E+L +
Sbjct: 103 KKTEGGLPNLAVISSVAPFVGLFGTVWGIMTSFTGIAASKDTSLAVVAPGIAEALAATAY 162
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
GL +IP+++ YN+ + E + +L
Sbjct: 163 GLAAAIPATLGYNRIGAMLAGLGQTLSHLVEERAVML 199
>gi|169796151|ref|YP_001713944.1| putative biopolymer transport protein (EXBB-like) [Acinetobacter
baumannii AYE]
gi|215483605|ref|YP_002325826.1| MotA/TolQ/ExbB proton channel family protein [Acinetobacter
baumannii AB307-0294]
gi|301345168|ref|ZP_07225909.1| biopolymer transport protein ExbB [Acinetobacter baumannii AB056]
gi|301511294|ref|ZP_07236531.1| biopolymer transport protein ExbB [Acinetobacter baumannii AB058]
gi|301595464|ref|ZP_07240472.1| biopolymer transport protein ExbB [Acinetobacter baumannii AB059]
gi|169149078|emb|CAM86955.1| putative biopolymer transport protein (EXBB-like) [Acinetobacter
baumannii AYE]
gi|213985798|gb|ACJ56097.1| MotA/TolQ/ExbB proton channel family protein [Acinetobacter
baumannii AB307-0294]
Length = 211
Score = 122 bits (307), Expect = 4e-26, Method: Composition-based stats.
Identities = 46/213 (21%), Positives = 99/213 (46%), Gaps = 21/213 (9%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
++ L G + L + SIL+ ++ I++ V + + + V
Sbjct: 1 MWELVKAGGWL----MLPLILCSILTVAISIERFVRLRRSQVLPKVLMND--GSADISVV 54
Query: 73 CKSLKNH---HNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+L+ + L I + E ++ ++ AR+ M+ ++E+ +
Sbjct: 55 ITNLEQDTNAQSTALGNILKAGF-EHQEHGEQFARAQ----------MEAMASQEISYLE 103
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA-GYYSNNVVSIPGIIESLISILLGLCV 188
+ ++FLG++S+ L+G+LG V+G++ F I G + + IPGI ++LI+ +G+ +
Sbjct: 104 KNINFLGTLSAIAPLLGLLGTVVGIIESFLVIDFGSAGSPSLMIPGISKALITTAVGMLI 163
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+IP+ I+Y F + + ++E + F A L
Sbjct: 164 AIPALISYRYFQRVVQDYIAELEQQSTLFHASL 196
>gi|260556183|ref|ZP_05828402.1| TolQ [Acinetobacter baumannii ATCC 19606]
gi|260410238|gb|EEX03537.1| TolQ [Acinetobacter baumannii ATCC 19606]
Length = 206
Score = 122 bits (307), Expect = 4e-26, Method: Composition-based stats.
Identities = 44/211 (20%), Positives = 83/211 (39%), Gaps = 33/211 (15%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
M+ SI+ + K + +L SI +W+V I + + L++Q
Sbjct: 1 MNFSIY--WQHADAVSKTLYFILLAMSIATWTVFILRLMGTRQLKQQAYA---------Q 49
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
L SLK L+ A++E + + I+ E
Sbjct: 50 LSQAITSLKA-KLQPLSFEQRKAVAE--------------------QALLRQISAEKANA 88
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISILLGLC 187
+ +S LG+++S VG+ G V G+ ++ + + + E+LI LGL
Sbjct: 89 DKGISVLGTIASIAPFVGLFGTVWGIFHALVAVGKSGQAGLAQVATPVGEALIMTGLGLA 148
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFS 218
V+IP+ +AYN + ++ A ++ A+
Sbjct: 149 VAIPAVLAYNICLRANRGLAHDLQDQAHSLL 179
>gi|332851805|ref|ZP_08433730.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Acinetobacter baumannii 6013150]
gi|332865815|ref|ZP_08436599.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Acinetobacter baumannii 6013113]
gi|332729812|gb|EGJ61147.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Acinetobacter baumannii 6013150]
gi|332735027|gb|EGJ66112.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Acinetobacter baumannii 6013113]
Length = 211
Score = 122 bits (307), Expect = 4e-26, Method: Composition-based stats.
Identities = 46/213 (21%), Positives = 99/213 (46%), Gaps = 21/213 (9%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
++ L G + L + SIL+ ++ I++ V + + + V
Sbjct: 1 MWELVKAGGWL----MLPLILCSILTVAISIERFVRLRRSQVLPKVLMND--GSADISVV 54
Query: 73 CKSLKNH---HNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+L+ + L I + E ++ ++ AR+ M+ ++E+ +
Sbjct: 55 ITNLEQDTNAQSTALGNILKAGF-EHQEYGEQFARAQ----------MEAMASQEISYLE 103
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA-GYYSNNVVSIPGIIESLISILLGLCV 188
+ ++FLG++S+ L+G+LG V+G++ F I G + + IPGI ++LI+ +G+ +
Sbjct: 104 KNINFLGTLSAIAPLLGLLGTVVGIIESFLVIDFGSAGSPSLMIPGISKALITTAVGMLI 163
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+IP+ I+Y F + + ++E + F A L
Sbjct: 164 AIPALISYRYFQRVVQDYIAELEQQSTLFHASL 196
>gi|83749962|ref|ZP_00946915.1| TolQ protein [Ralstonia solanacearum UW551]
gi|83723365|gb|EAP70590.1| TolQ protein [Ralstonia solanacearum UW551]
Length = 206
Score = 122 bits (306), Expect = 4e-26, Method: Composition-based stats.
Identities = 42/213 (19%), Positives = 88/213 (41%), Gaps = 17/213 (7%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLR----RQFREFEQLFWSGQS 68
+F++ G I L I S+L+ ++II++ V + + + E + ++
Sbjct: 1 MFSIIQAAGWP----IWPLLIASVLALALIIERFVALQRKKIIPPKVYDEALAVAHQRKA 56
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
V +L+ L +A+ P ++ +++ A +
Sbjct: 57 TPEVVNTLEQ--GSPLGRAXAAALRHV-------VLHPATTREAAKEVVEEAGQNVAHRL 107
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCV 188
L+ LG+++S L+G+ G V+GM+ F S +N GI +L + LGL V
Sbjct: 108 ERYLNALGTIASVAPLMGLFGTVVGMIEIFGSQTAAGTNPQTLAHGISVALYNTALGLVV 167
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+IP+ I + F + +++E + + +
Sbjct: 168 AIPTLIFWRYFRGVVDNYVVELEHLSATYLDAI 200
>gi|260061802|ref|YP_003194882.1| putative biopolymer transport protein [Robiginitalea biformata
HTCC2501]
gi|88785935|gb|EAR17104.1| putative biopolymer transport protein [Robiginitalea biformata
HTCC2501]
Length = 228
Score = 122 bits (306), Expect = 4e-26, Method: Composition-based stats.
Identities = 48/220 (21%), Positives = 91/220 (41%), Gaps = 17/220 (7%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS---GQ 67
+S+ L G IIT+LF+ ++ + ++ + + + F G
Sbjct: 21 LSVIDLIFNGGTGSIVIITVLFVMLAVAMYIYFERLLAIKAASKIDKNFMNQIRDHVMGG 80
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
L K L + +A + +KG D I+ ++ A E+ +
Sbjct: 81 KL-EAAKILCAQTDSPVA-----------RLTEKGISRIGKPLDDINTAIENAGTLEVYK 128
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA--GYYSNNVVSIPGIIESLISILLG 185
+ + +S L +++ A ++G LG V+GM+ F +A G + GI ++ + + G
Sbjct: 129 LEKNVSVLATVAGAAPMIGFLGTVIGMILAFHQMATSGGQAEMGALASGIYTAMTTTVAG 188
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
L V I + + YN + + K +ME A EF +LS
Sbjct: 189 LVVGIIAYVGYNHLVNRTDKVVHKMEANAVEFLDLLSEPI 228
>gi|237738480|ref|ZP_04568961.1| biopolymer transport exbB protein [Fusobacterium mortiferum ATCC
9817]
gi|229420360|gb|EEO35407.1| biopolymer transport exbB protein [Fusobacterium mortiferum ATCC
9817]
Length = 203
Score = 122 bits (306), Expect = 5e-26, Method: Composition-based stats.
Identities = 40/201 (19%), Positives = 88/201 (43%), Gaps = 13/201 (6%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQFR----EFEQLFWSGQSLETVCKSLKNHHNIG 83
+ ++ I SI+ S +I++ ++F + R + ++ ++ V K L +
Sbjct: 11 MYVILIMSIIGLSAVIERFIHFRKYEKDNRTTLNKELRVMIEQGNIIDVVKKL-HPEKSA 69
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
++ + + ++ +P ++++ E+ + + + + ++
Sbjct: 70 VSRVLKVVLYDY-------YNNPNSSIEKLEEKGKERAMAEIAGLEKNMWIISLVAHLTP 122
Query: 144 LVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIED 202
VG+LG V GM+ FQ+++ Y + + V GI E+L + GL V+IP+ I YN F +
Sbjct: 123 FVGLLGTVTGMIKAFQAVSIYGTGDASVLAKGISEALFTTAGGLFVAIPALIFYNYFNKK 182
Query: 203 SKKFAMQMEGFANEFSAILSR 223
K ME E + +
Sbjct: 183 IDKIISDMEITTTELLNMFRK 203
>gi|305664635|ref|YP_003860922.1| putative biopolymer transport protein [Maribacter sp. HTCC2170]
gi|88708652|gb|EAR00888.1| putative biopolymer transport protein [Maribacter sp. HTCC2170]
Length = 230
Score = 122 bits (306), Expect = 5e-26, Method: Composition-based stats.
Identities = 45/219 (20%), Positives = 87/219 (39%), Gaps = 15/219 (6%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS-- 68
+S+ L G II++LF+ ++ + ++ + F +
Sbjct: 23 LSVIDLIFNGGTGSIVIISILFVLLFVALYIYFERIFAIKAASKIDSNFMNQIRDHVTNG 82
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
K L + +A + +KG D I+ ++ A E+ ++
Sbjct: 83 KLEAAKLLCAQTDSPVA-----------RLTEKGVSRIGKPLDDINTAIENAGTLEVYKL 131
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA--GYYSNNVVSIPGIIESLISILLGL 186
+S L +++ A ++G LG V+GM+ F +A G + GI ++ + + GL
Sbjct: 132 ERNVSVLATVAGAAPMIGFLGTVIGMILAFHEMATSGGQAEMGSLASGIYTAMTTTVAGL 191
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
V I + I YN + + K +ME A EF +L+
Sbjct: 192 IVGIIAYIGYNHLVNRTDKVVHKMEANAVEFLDLLNEPL 230
>gi|323138337|ref|ZP_08073408.1| MotA/TolQ/ExbB proton channel [Methylocystis sp. ATCC 49242]
gi|322396420|gb|EFX98950.1| MotA/TolQ/ExbB proton channel [Methylocystis sp. ATCC 49242]
Length = 219
Score = 122 bits (306), Expect = 5e-26, Method: Composition-based stats.
Identities = 48/219 (21%), Positives = 89/219 (40%), Gaps = 23/219 (10%)
Query: 6 LAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS 65
+ I +S +FM G+ K ++ LL + S+ +W +II + R
Sbjct: 1 MDISSMSPVGMFMNAGVVSKVVMALLLVASVWTWVLIIDGVFVVFRISR----------- 49
Query: 66 GQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGI--QDRIDRMMDVAIAR 123
++ + + G + S K+ D + ++R+ + M+ A
Sbjct: 50 ---------AIDSARSGGPEGVLWPITSAGMKALDVRVPDETALEKRERVFQHMNRAARE 100
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISI 182
+ L L +SS G VG+ G V G++ F IA ++ V PGI E+L +
Sbjct: 101 FMTIAKGGLPNLAIVSSVGPFVGLFGTVWGIISSFSGIAQTQDTSLAVVAPGIAEALAAT 160
Query: 183 LLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
GL +IP++I YN+ + ++ + + IL
Sbjct: 161 AYGLAAAIPAAIGYNRIGAAFSRLNEEIGQYIKAEANIL 199
>gi|319899977|ref|YP_004159705.1| outer membrane transport energization protein ExbB [Bacteroides
helcogenes P 36-108]
gi|319415008|gb|ADV42119.1| outer membrane transport energization protein ExbB [Bacteroides
helcogenes P 36-108]
Length = 238
Score = 122 bits (306), Expect = 5e-26, Method: Composition-based stats.
Identities = 38/225 (16%), Positives = 95/225 (42%), Gaps = 21/225 (9%)
Query: 7 AIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS- 65
A +++++++ ++ G I+ +L + SIL + ++ +++ ++ F
Sbjct: 30 ASDEMNLWSMAVKGGW----IMIVLGLMSILCFYILFERNYVIRRAGKEDPLFMDKIKDY 85
Query: 66 --GQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAR 123
G L+ ++ + A + +S + + + ++
Sbjct: 86 ILGGELKAAIAYCRS-VDTPSARMIEKGISRLGRPVND-----------VQAAIENVGNI 133
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI--PGIIESLIS 181
E+ ++ + ++ + ++S ++G LG V GM+ F +A +N +++ GI E++I+
Sbjct: 134 EVAKLEKGMTIMATISGGAPMLGFLGTVTGMVRAFWQMANAGNNIDITMLSGGIYEAMIT 193
Query: 182 ILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+ GL V I + AYN + +ME F +L+
Sbjct: 194 TVGGLVVGIAAMFAYNYLVTLIDGVVNKMEAKTMAFMDLLNEPAR 238
>gi|296327926|ref|ZP_06870461.1| biopolymer transport ExbB protein [Fusobacterium nucleatum subsp.
nucleatum ATCC 23726]
gi|296154882|gb|EFG95664.1| biopolymer transport ExbB protein [Fusobacterium nucleatum subsp.
nucleatum ATCC 23726]
Length = 202
Score = 121 bits (305), Expect = 6e-26, Method: Composition-based stats.
Identities = 45/202 (22%), Positives = 93/202 (46%), Gaps = 15/202 (7%)
Query: 27 IITLLFIFSILSWSVIIQKSVNFITLRRQ----FREFEQLFWSGQSLETVCKSLKNHHNI 82
I+ +L I SI +++V++++ V F + F++ L + + L+ +
Sbjct: 11 ILWVLVIISIGAFAVVLERIVFFARNEKNVGSNFKDEILLLVASKKLDEAIALCDTKKSC 70
Query: 83 GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAG 142
SA+ ++ + KG I +QD + ++ +E+ +L+ L S+ S
Sbjct: 71 -----VASAVRKFLQKAPKG----IDVQDY-EFILKEVTNQEISPYERRLNLLASVMSIS 120
Query: 143 LLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISILLGLCVSIPSSIAYNKFIE 201
++G+LG V GM+ F +I+ Y + + + GI E+L++ GL ++IP + YN
Sbjct: 121 PMLGLLGTVTGMIRAFTNISKYGAGDAAVVADGIAEALLTTAAGLMIAIPVIVVYNYLNR 180
Query: 202 DSKKFAMQMEGFANEFSAILSR 223
+K +++ I R
Sbjct: 181 RLEKMENEIDDVITNIINIFRR 202
>gi|53805021|ref|YP_113146.1| MotA/TolQ/ExbB proton channel family protein [Methylococcus
capsulatus str. Bath]
gi|53758782|gb|AAU93073.1| MotA/TolQ/ExbB proton channel family domain protein [Methylococcus
capsulatus str. Bath]
Length = 204
Score = 121 bits (305), Expect = 6e-26, Method: Composition-based stats.
Identities = 47/204 (23%), Positives = 88/204 (43%), Gaps = 17/204 (8%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLR---RQFREFEQLFWSGQSLETVCKSLKNHHNIGL 84
I + I S+++ ++I+++ T R + W L+ + N L
Sbjct: 12 IWPILICSVVALAIILERLWALRTSRILPAELASTVWTLWRNDRLDAGSIR-QIALNSPL 70
Query: 85 AAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLL 144
A+ + ++ K + + R ++ A + + + L+ LG+++S
Sbjct: 71 GAVLAAGLANHKHGR-----------EVMQRCIEQAGRQVVHAMERYLNTLGTIASISPY 119
Query: 145 VGILGAVLGMMGFFQSIAGY--YSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIED 202
+G+LG+VLGMM F + N V G+ E LI+ GL V+IPS + Y F
Sbjct: 120 LGLLGSVLGMMKVFAGFSAAHGAGNPAVLAGGLSEILITTAAGLAVAIPSLMFYRYFRGR 179
Query: 203 SKKFAMQMEGFANEFSAILSRQTE 226
+ +M++E A A+L + E
Sbjct: 180 VNELSMRLEEEAVRLIAVLHGERE 203
>gi|295135758|ref|YP_003586434.1| MotA/TolQ/ExbB family biopolymer transport protein [Zunongwangia
profunda SM-A87]
gi|294983773|gb|ADF54238.1| MotA/TolQ/ExbB family biopolymer transport protein [Zunongwangia
profunda SM-A87]
Length = 233
Score = 121 bits (304), Expect = 7e-26, Method: Composition-based stats.
Identities = 47/220 (21%), Positives = 94/220 (42%), Gaps = 17/220 (7%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+SIF L + G+A + II +LF+ + + ++ + + + F L
Sbjct: 26 LSIFDLLLSGGIAGQIIIFVLFVLLFAAVYIYFERLFAIKSASQVDKNFMHQIKDSV-LN 84
Query: 71 TVCKSLK---NHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+S K + +A + +KG + I+ ++ A E+ +
Sbjct: 85 GNIESAKIRCAQSDNPVA-----------RLTEKGISRIGSPLEDINTAIENAGRLEVYK 133
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGY--YSNNVVSIPGIIESLISILLG 185
+ + +S L +++ A ++G LG V+GM+ F +A + + GI ++ + + G
Sbjct: 134 LEKNVSILATIAGAAPMIGFLGTVIGMVIAFHELATSSGQAQMGLLAEGIYTAMTTTVAG 193
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
L V I + I YN + + K QME A +F +L+
Sbjct: 194 LIVGIIAYIGYNHLVVKTDKVVHQMEATAVDFLDLLNEPA 233
>gi|329957266|ref|ZP_08297786.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Bacteroides clarus YIT 12056]
gi|328522979|gb|EGF50082.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Bacteroides clarus YIT 12056]
Length = 238
Score = 121 bits (304), Expect = 8e-26, Method: Composition-based stats.
Identities = 37/225 (16%), Positives = 96/225 (42%), Gaps = 21/225 (9%)
Query: 7 AIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS- 65
A +++++++ ++ G I+ +L + S++ + ++ +++ ++ F
Sbjct: 30 APNEMNLWSMAVKGGW----IMIVLGVLSVICFYILFERNYVIRKAGKEDPMFMDKIKDY 85
Query: 66 --GQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAR 123
G ++ ++ N A + +S + + + ++
Sbjct: 86 ILGGEIKAAIAYCRS-VNTPSARMIEKGISRLGRPVND-----------VQAAIENVGNI 133
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI--PGIIESLIS 181
E+ ++ + L+ + ++S ++G LG V GM+ F +A +N +++ GI E++I+
Sbjct: 134 EVAKLEKGLTIMATISGGAPMIGFLGTVTGMVRAFFEMANAGNNIDITLLSGGIYEAMIT 193
Query: 182 ILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+ GL V I + AYN + +ME F +L+ +
Sbjct: 194 TVGGLIVGIIAMFAYNYLVTLVDGVVNKMEAKTMAFMDLLNEPAK 238
>gi|77458723|ref|YP_348229.1| MotA/TolQ/ExbB proton channel [Pseudomonas fluorescens Pf0-1]
gi|77382726|gb|ABA74239.1| outer membrane transport energization protein ExbB [Pseudomonas
fluorescens Pf0-1]
Length = 599
Score = 121 bits (304), Expect = 8e-26, Method: Composition-based stats.
Identities = 53/227 (23%), Positives = 99/227 (43%), Gaps = 10/227 (4%)
Query: 14 FALFMQMGLA-VKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS---- 68
+ II +L + SW ++++K+ + +F F +
Sbjct: 357 LGFLLNAVPVDAWVIIAVLVLMMFQSWIIMLRKNRTLSRVTAANEDFRVQFAKVGTRLEM 416
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSP---IGIQDRIDRMMDVAIAREL 125
+ + + L +++ A+ E + ++GA + + I MD RE
Sbjct: 417 FADDTQLAQRLQHSSLWRLYLVAVKEIRTRREQGADTSSVSAATIEAIRCSMDGVRTREN 476
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILL 184
++++ KLS L + + G +G+LG VLG+M F A N+ PG+ +L++ +
Sbjct: 477 QQLSSKLSTLSNAIAGGPYIGLLGTVLGIMVVFLGTAMAGDVNINAIAPGMAAALLATAM 536
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR-QTEGNIS 230
GL V+IP+ YN+ I +K+ + M F +EF L+ EG S
Sbjct: 537 GLFVAIPALFGYNRLITRNKEVSADMRVFVDEFITRLAEMHGEGQSS 583
>gi|319790082|ref|YP_004151715.1| MotA/TolQ/ExbB proton channel [Thermovibrio ammonificans HB-1]
gi|317114584|gb|ADU97074.1| MotA/TolQ/ExbB proton channel [Thermovibrio ammonificans HB-1]
Length = 209
Score = 121 bits (304), Expect = 8e-26, Method: Composition-based stats.
Identities = 47/216 (21%), Positives = 93/216 (43%), Gaps = 20/216 (9%)
Query: 17 FMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLR---RQFREFEQLFWSGQSLETVC 73
+ G+ +L S++S +VIIQK + + ++ + F SL
Sbjct: 7 ISEAGIVG----YILLFLSVVSLAVIIQKLITLRLSKLIPKEDFKLLADFIRRGSLGDAV 62
Query: 74 KSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLS 133
+ K N + + E K ++ +V+ +++ E+ ++
Sbjct: 63 ELCKRRKN-----LLTEVVHETFKHVALN-----PTRETFLSAFEVSARKKMMELERGMA 112
Query: 134 FLGSMSSAGLLVGILGAVLGMMGFF---QSIAGYYSNNVVSIPGIIESLISILLGLCVSI 190
L ++++ L+G+LG V+GM+ F + G N GI E+L++ + GL V+I
Sbjct: 113 LLATVAAISPLLGLLGTVIGMVKIFGVLTAGGGAIGNPQQLSAGIAEALLTTIFGLVVAI 172
Query: 191 PSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
P+ + YN F + K A ++E F+ L R+ +
Sbjct: 173 PAVVMYNLFNKKLDKIAAELEAAGVFFANALGRRQK 208
>gi|189462958|ref|ZP_03011743.1| hypothetical protein BACCOP_03660 [Bacteroides coprocola DSM 17136]
gi|189430240|gb|EDU99224.1| hypothetical protein BACCOP_03660 [Bacteroides coprocola DSM 17136]
Length = 239
Score = 121 bits (304), Expect = 8e-26, Method: Composition-based stats.
Identities = 38/221 (17%), Positives = 92/221 (41%), Gaps = 19/221 (8%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
+++++ + + G I+ +L + S++++ + +++V ++ F
Sbjct: 33 EMNLWDMACKGGW----IMIVLALMSVIAFYIFFERAVAIRKAGKEDPLFMDRIRDYIKT 88
Query: 70 ETVCKSLK--NHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ ++ N + + + + + ++ E+ +
Sbjct: 89 GEIKSAINYCRITNTPSSRMIEKGIMRMGRPVAD-----------VQAAIENTGNIEVAK 137
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI--PGIIESLISILLG 185
+ LS + ++SS ++G LG V GM+ F ++A +N +++ GI E++I+ + G
Sbjct: 138 LENGLSIMATISSGAPMLGFLGTVTGMVRAFWNMANAGNNIDITLLSSGIYEAMITTVGG 197
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
L V I + AYN + K QME F +++ E
Sbjct: 198 LVVGIATMFAYNHLVYRVDKVVSQMEARTIAFMDLMNEPNE 238
>gi|328952950|ref|YP_004370284.1| MotA/TolQ/ExbB proton channel [Desulfobacca acetoxidans DSM 11109]
gi|328453274|gb|AEB09103.1| MotA/TolQ/ExbB proton channel [Desulfobacca acetoxidans DSM 11109]
Length = 231
Score = 121 bits (304), Expect = 8e-26, Method: Composition-based stats.
Identities = 37/188 (19%), Positives = 80/188 (42%), Gaps = 16/188 (8%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG---QSLETVCKSLKNHHNI 82
++ LL S+ S +++I K++ F R F + + + + ++
Sbjct: 17 WVLWLLLGLSVASVAIMIDKTLIFYRHRFNQDRFVAEIKTSLRQEDWPRIISRCEQERSM 76
Query: 83 GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAG 142
A + + + E +S + + +M + + ++L FLG++ +
Sbjct: 77 -EARVLLVGLREIPRS-----------KAAVQDIMKGERLQVGLYLGKRLGFLGTLGANA 124
Query: 143 LLVGILGAVLGMMGFFQSIA-GYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIE 201
+G+ G VLG++ F+ +A + GI E+LI+ +GL V+IP+ + YN F
Sbjct: 125 PFIGLFGTVLGIIHAFKDLALAEGGGGPAVMAGIAEALIATAVGLLVAIPAVVMYNLFHH 184
Query: 202 DSKKFAMQ 209
+ +
Sbjct: 185 RLQVVLER 192
>gi|262375008|ref|ZP_06068242.1| TolQ [Acinetobacter lwoffii SH145]
gi|262310021|gb|EEY91150.1| TolQ [Acinetobacter lwoffii SH145]
Length = 207
Score = 121 bits (304), Expect = 9e-26, Method: Composition-based stats.
Identities = 39/223 (17%), Positives = 86/223 (38%), Gaps = 35/223 (15%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
M+ S++ + K + +L SI +W++ + + + L++
Sbjct: 1 MNFSVY--WQHADAVSKTLYFVLLAMSIATWTIFVLRLMGTRQLKQIAYA---------Q 49
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
L + LK K G + ++ + I+ E
Sbjct: 50 LSKALEQLK------------------TKLAPLGFEQRKAVAEQ---ALLRQISAEKANA 88
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISILLGLC 187
+ +S LG+++S VG+ G V G+ ++ + + + E+LI LGL
Sbjct: 89 EKGVSVLGTIASISPFVGLFGTVWGIFHALVAVGKSGQAGLAQVATPVGEALIMTGLGLA 148
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFS--AILSRQTEGN 228
V+IP+ +AYN + ++ A +++ A+ +L +++
Sbjct: 149 VAIPAVLAYNICVRANRGLAHELQDQAHGLLIDTMLQQESAAK 191
>gi|255320525|ref|ZP_05361706.1| biopolymer transport protein [Acinetobacter radioresistens SK82]
gi|262378417|ref|ZP_06071574.1| biopolymer transporter [Acinetobacter radioresistens SH164]
gi|255302497|gb|EET81733.1| biopolymer transport protein [Acinetobacter radioresistens SK82]
gi|262299702|gb|EEY87614.1| biopolymer transporter [Acinetobacter radioresistens SH164]
Length = 210
Score = 121 bits (303), Expect = 9e-26, Method: Composition-based stats.
Identities = 49/213 (23%), Positives = 98/213 (46%), Gaps = 21/213 (9%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
++ L G + L + SI + ++ +++ + R Q E + Q + V
Sbjct: 1 MWELVKAGGWL----MLPLVVCSIFTIAITLERFIRLK--RSQVIPVELILRHPQDIAPV 54
Query: 73 CKSLKNHHN---IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
L + N L I ++ + ++S + M+ ++E+ +
Sbjct: 55 IDRLSHAPNLQASTLGQILLTGYASRQES-----------EQFARAQMEAKASQEIGYLE 103
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA-GYYSNNVVSIPGIIESLISILLGLCV 188
+ ++FLG++S+ L+G+LG VLG++ F I G SN + IPGI ++LI+ G+ +
Sbjct: 104 KNINFLGTLSAVAPLIGLLGTVLGIIESFLVIDLGTTSNPGLMIPGISKALITTAAGMLI 163
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+IP+ AY F +++ ++E + F A L
Sbjct: 164 AIPALFAYRFFQRLVQEYVAELEQQSTLFHAAL 196
>gi|110598373|ref|ZP_01386646.1| MotA/TolQ/ExbB proton channel [Chlorobium ferrooxidans DSM 13031]
gi|110339982|gb|EAT58484.1| MotA/TolQ/ExbB proton channel [Chlorobium ferrooxidans DSM 13031]
Length = 225
Score = 121 bits (303), Expect = 9e-26, Method: Composition-based stats.
Identities = 44/182 (24%), Positives = 84/182 (46%), Gaps = 3/182 (1%)
Query: 39 WSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKS 98
W++I K + + F F+ +++ + + + L +F + E++
Sbjct: 34 WAIIAYKFGYVRKSLGESKVFLDFFFDVYNVDKAFTESEQYRHGSLPRVFRAGYIEYRAL 93
Query: 99 CDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFF 158
+K + RI R + E + ++ +SFL ++ + +G+ G V G+M F
Sbjct: 94 GEKS--DIRQARARIARAIKREANLEGKRLSSLISFLATVGNTAPFIGLFGTVWGIMTSF 151
Query: 159 QSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEF 217
Q+I S ++ + PGI E+LI+ GL +IP+ I YN F + +E F+ EF
Sbjct: 152 QNIGQSQSASLAIVAPGISEALIATAAGLAAAIPAVIGYNYFSQQIGSIEHDLEEFSPEF 211
Query: 218 SA 219
+A
Sbjct: 212 AA 213
>gi|183221018|ref|YP_001839014.1| biopolymer transport ExbB protein [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
gi|189911112|ref|YP_001962667.1| biopolymer transport protein [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|106879690|emb|CAJ90414.1| biopolymer transport ExbB protein [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
gi|167775788|gb|ABZ94089.1| Biopolymer transport protein, TolQ-like protein [Leptospira biflexa
serovar Patoc strain 'Patoc 1 (Ames)']
gi|167779440|gb|ABZ97738.1| Biopolymer transport ExbB protein; putative membrane protein
[Leptospira biflexa serovar Patoc strain 'Patoc 1
(Paris)']
Length = 204
Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats.
Identities = 45/207 (21%), Positives = 89/207 (42%), Gaps = 20/207 (9%)
Query: 21 GLAVKCIITLLFIFSILSWSVIIQKSVNFITLRR----QFREFEQLFWSGQSLETVCKSL 76
+ + I L+ + SI+ +++I+++ V + L+ FR +L G+ + L
Sbjct: 14 SVPPQTIPILIILVSIVGFTIIVERLVYYWRLKSIPQDHFRRVRELAREGK-WDDAKDVL 72
Query: 77 KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLG 136
A + A ++ + R++ + L+ LG
Sbjct: 73 SQEVQSPAAVLLRMAFDLKRRGVSFWEED-----------IRQEGFRQIYLMERYLTGLG 121
Query: 137 SMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAY 196
++++ L+G+LG V+G++ F AG V GI E+LI+ +GL ++IP+ I Y
Sbjct: 122 TIATIAPLLGVLGTVIGIVRSFAEGAGTQGAEV----GISEALITTAMGLAIAIPAYIFY 177
Query: 197 NKFIEDSKKFAMQMEGFANEFSAILSR 223
N F ++ +ME + L+R
Sbjct: 178 NVFTRMKEEKITEMENVTDLVLPHLNR 204
>gi|187929874|ref|YP_001900361.1| MotA/TolQ/ExbB proton channel [Ralstonia pickettii 12J]
gi|187726764|gb|ACD27929.1| MotA/TolQ/ExbB proton channel [Ralstonia pickettii 12J]
Length = 206
Score = 120 bits (302), Expect = 1e-25, Method: Composition-based stats.
Identities = 42/213 (19%), Positives = 88/213 (41%), Gaps = 17/213 (7%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLR----RQFREFEQLFWSGQS 68
+F++ G I L I S+L+ ++II++ V + + + E + ++
Sbjct: 1 MFSIIQAAGWP----IWPLLIASVLALALIIERFVALQHKKIIPPKVYDEALAVAHQRRA 56
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
V +L+ L + +A+ P +D +++ A +
Sbjct: 57 TPEVVNTLEQ--GSPLGRLLAAALRHV-------VLHPNTTRDAAKEVVEEAGQNVAHRL 107
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCV 188
L+ LG+++S L+G+ G V+GM+ F S +N GI +L + L L V
Sbjct: 108 ERYLNALGTIASVAPLMGLFGTVVGMIEIFGSQTAAGTNPQALAHGISVALYNTALCLVV 167
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+IP+ I + F + +++E + + +
Sbjct: 168 AIPTLIFWRYFRGVVDNYVVELEHLSTTYLDAI 200
>gi|319944096|ref|ZP_08018374.1| MotA/TolQ/ExbB proton channel family protein [Lautropia mirabilis
ATCC 51599]
gi|319742590|gb|EFV94999.1| MotA/TolQ/ExbB proton channel family protein [Lautropia mirabilis
ATCC 51599]
Length = 203
Score = 120 bits (302), Expect = 1e-25, Method: Composition-based stats.
Identities = 42/209 (20%), Positives = 83/209 (39%), Gaps = 13/209 (6%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
+F++ G I L + SI + ++I+++++ + LE V
Sbjct: 1 MFSIIQAAGWP----IWFLILASIATVALIVERAITLQR---------RKILPPGMLEEV 47
Query: 73 CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKL 132
+N + S + G R +D I M+ ++ L
Sbjct: 48 VNLHRNRQLNAEMVTRVERSSPLGRVLATGLRHEFESRDMIKDAMEETGRAVAHDLERFL 107
Query: 133 SFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPS 192
LG++++ L+G+ G V+GM+ F S A ++ GI +L + G+ V+IP+
Sbjct: 108 PTLGTLATVAPLLGLFGTVIGMIEIFGSQAPSGNDPTQLAHGISIALYNTAFGIGVAIPA 167
Query: 193 SIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+AY F F ++ME + ++
Sbjct: 168 LLAYRGFRSRVDDFLVEMEQQSLRLVDVI 196
>gi|19704647|ref|NP_604209.1| biopolymer transport exbB protein [Fusobacterium nucleatum subsp.
nucleatum ATCC 25586]
gi|19714951|gb|AAL95508.1| Biopolymer transport exbB protein [Fusobacterium nucleatum subsp.
nucleatum ATCC 25586]
Length = 202
Score = 120 bits (302), Expect = 1e-25, Method: Composition-based stats.
Identities = 45/202 (22%), Positives = 93/202 (46%), Gaps = 15/202 (7%)
Query: 27 IITLLFIFSILSWSVIIQKSVNFITLRRQ----FREFEQLFWSGQSLETVCKSLKNHHNI 82
I+ +L I SI +++V++++ V F + F++ L + + L+ +
Sbjct: 11 ILWVLVIISIGAFAVVLERIVFFARNEKNVGSNFKDEILLLVASKKLDEAIALCDTKKSC 70
Query: 83 GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAG 142
SA+ ++ + KG I +QD + ++ +E+ +L+ L S+ S
Sbjct: 71 -----VASAVRKFLQKAPKG----IDVQDY-EFILKEVTNQEISPYERRLNLLASVMSIS 120
Query: 143 LLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISILLGLCVSIPSSIAYNKFIE 201
++G+LG V GM+ F +I+ Y + + + GI E+L++ GL ++IP + YN
Sbjct: 121 PMLGLLGTVTGMIRAFTNISKYGAGDAAIVADGIAEALLTTAAGLMIAIPVIVVYNYLNR 180
Query: 202 DSKKFAMQMEGFANEFSAILSR 223
+K +++ I R
Sbjct: 181 RLEKMENEIDDVITNIINIFRR 202
>gi|297184175|gb|ADI20294.1| hypothetical protein [uncultured Sphingobacterium sp. EB080_L08E11]
Length = 232
Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats.
Identities = 41/220 (18%), Positives = 82/220 (37%), Gaps = 17/220 (7%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+SI L G+ I+T L I SI + + +++ + F L+
Sbjct: 25 MSILELMTSGGIGGILIMTFLAILSIFAIYIFLERFGAIRNANKVDPNFMNNIKD-MVLD 83
Query: 71 ---TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
++L + +A + +S K I + ++ E+
Sbjct: 84 GKLDAAQALCTAESTPVARMIEKGISRIGKPLGD-----------ITQAIENQGKLEVTR 132
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV--VSIPGIIESLISILLG 185
+ + L L ++S ++G LG V+GM+ F+ +A + GI ++ + + G
Sbjct: 133 LEKGLPMLATISGGAPMIGFLGTVIGMILTFKEMANAGGQIKLDMMAEGIYTAMTTTVAG 192
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
L V I + YN + + ++E A F +L
Sbjct: 193 LLVGIIAYFGYNFLVTRVDRVVYKLEDSAMAFLDLLHEPA 232
>gi|227824312|ref|ZP_03989144.1| predicted protein [Acidaminococcus sp. D21]
gi|226904811|gb|EEH90729.1| predicted protein [Acidaminococcus sp. D21]
Length = 211
Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats.
Identities = 50/214 (23%), Positives = 96/214 (44%), Gaps = 15/214 (7%)
Query: 17 FMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSL 76
F++ G ++ L + S+ S ++I+ + F R F + F CK+L
Sbjct: 13 FLRGGP----VMWPLLLCSMASLALILDRFAFFHRADTD-RSFARTF---------CKAL 58
Query: 77 KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLG 136
+ + + + + +P I+ + +M + + L+ E LS+L
Sbjct: 59 RRNDWQEADRVAQATKGGEAHLAVRLLDAPEEIRAQEAFIMSES-KQVLDRYKEGLSYLS 117
Query: 137 SMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAY 196
+ + L+G+LG + GMM F ++ + N GI E+LI+ + GL ++I + +
Sbjct: 118 VIITLAPLLGLLGTITGMMASFGNLGSRWENPFAVTSGIGEALITTVFGLAIAIVTLCCH 177
Query: 197 NKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
F E + A+ ME A+ FS + RQ +G+ S
Sbjct: 178 AYFEERVHRIALDMEMIASTFSEAIVRQKKGDQS 211
>gi|86140668|ref|ZP_01059227.1| putative biopolymer transport protein [Leeuwenhoekiella blandensis
MED217]
gi|85832610|gb|EAQ51059.1| putative biopolymer transport protein [Leeuwenhoekiella blandensis
MED217]
Length = 234
Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats.
Identities = 45/219 (20%), Positives = 86/219 (39%), Gaps = 15/219 (6%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS--GQS 68
+S+F L M GL + II +LF+ ++ + ++ F
Sbjct: 27 LSLFDLLMSGGLPGQIIILVLFVLLFVAIYIYFERLFAIKAASGMDSNFMNQIKDNVANG 86
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
K L N ++ + KG + I+ ++ + E+ +
Sbjct: 87 KIEAAKVLCAQQNSPVS-----------RLTAKGISRIGSPLEDINTAIENSGRLEVYRL 135
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGY--YSNNVVSIPGIIESLISILLGL 186
+ +S L +++ A ++G LG V+GM+ F +A + GI ++ + + GL
Sbjct: 136 EKNVSVLATIAGAAPMIGFLGTVIGMVLAFHQLATSSGQAEMGNLAEGIYTAMTTTVAGL 195
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
V I + I YN + + K QME A +F +L+
Sbjct: 196 IVGIIAYIGYNHLVVRTDKVVHQMEATAVDFLDMLNEPV 234
>gi|262369950|ref|ZP_06063277.1| conserved hypothetical protein [Acinetobacter johnsonii SH046]
gi|262314989|gb|EEY96029.1| conserved hypothetical protein [Acinetobacter johnsonii SH046]
Length = 207
Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats.
Identities = 40/211 (18%), Positives = 83/211 (39%), Gaps = 33/211 (15%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
M+ S++ + K + +L SI +W++ + + + L++Q
Sbjct: 1 MNFSVY--WQHADAVSKTLYFILLAMSIATWTIFVLRIMGTRQLKQQAYA---------Q 49
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
L LK+ F E +K+ ++ + I+ E
Sbjct: 50 LSQALAKLKSK--------FAVLNFEQRKAV-------------AEQALLRQISAEKANA 88
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISILLGLC 187
+ +S LG+++S VG+ G V G+ ++ + + + E+LI LGL
Sbjct: 89 EKGVSVLGTIASLAPFVGLFGTVWGIFHALVAVGKSGQAGLAQVATPVGEALIMTGLGLA 148
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFS 218
V+IP+ +AYN ++ A +++ A+
Sbjct: 149 VAIPAVLAYNICARVNRTLAHELQDQAHGLL 179
>gi|167589397|ref|ZP_02381785.1| MotA/TolQ/ExbB proton channel [Burkholderia ubonensis Bu]
Length = 151
Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats.
Identities = 34/142 (23%), Positives = 63/142 (44%), Gaps = 5/142 (3%)
Query: 85 AAIFMSAMSEWKKSCDKGARSPIGIQ----DRIDRMMDVAIARELEEITEKLSFLGSMSS 140
+F+ + + + + + +R+ R + A+ R + L S+ S
Sbjct: 5 ERVFVPLAEAARDAAHDHDPAALAARVERSERVLRALRHAMLRSQRRLEFGQVLLASIGS 64
Query: 141 AGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIPSSIAYNKF 199
VG+LG V G+ SIA + S+ G + E+LI GL V+IP+ +AYN
Sbjct: 65 TAPFVGLLGTVWGIYHALGSIAASGQAQIESVAGPVGEALIMTAFGLVVAIPAVLAYNIL 124
Query: 200 IEDSKKFAMQMEGFANEFSAIL 221
++ A +++GFA + +
Sbjct: 125 GRLVRQLAEELDGFARDLHVFV 146
>gi|302877903|ref|YP_003846467.1| MotA/TolQ/ExbB proton channel [Gallionella capsiferriformans ES-2]
gi|302580692|gb|ADL54703.1| MotA/TolQ/ExbB proton channel [Gallionella capsiferriformans ES-2]
Length = 202
Score = 119 bits (300), Expect = 2e-25, Method: Composition-based stats.
Identities = 46/215 (21%), Positives = 87/215 (40%), Gaps = 13/215 (6%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
+FA+ G I L SI++ +I ++ + + R L+ V
Sbjct: 1 MFAIVEAAGWP----IWFLIFASIIATGLITERLIYLRSSR---------IAPSGLLDEV 47
Query: 73 CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKL 132
K LK ++ S G ++ + + ++ A ++ L
Sbjct: 48 VKELKQRGVSEGMLAKLAKHSPLGCIFAAGLKNIKSTPEIMKESIEEAGRATSHDLEHFL 107
Query: 133 SFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPS 192
+ LG+++S L+G+ G V+GM+ F + ++ + GI +L + GL V+IPS
Sbjct: 108 TTLGTIASISPLLGLFGTVVGMIEIFGAQTAAGNSPAILAHGISVALYNTAFGLIVAIPS 167
Query: 193 SIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEG 227
I Y F + ++ME A + I+ Q +G
Sbjct: 168 MIFYRHFRAKADSLTIEMEQQAIKLVEIVHGQRKG 202
>gi|56478316|ref|YP_159905.1| MotA/TolQ/ExbB proton channel family protein [Aromatoleum
aromaticum EbN1]
gi|56314359|emb|CAI09004.1| MotA/TolQ/ExbB proton channel family protein [Aromatoleum
aromaticum EbN1]
Length = 202
Score = 119 bits (300), Expect = 2e-25, Method: Composition-based stats.
Identities = 48/215 (22%), Positives = 91/215 (42%), Gaps = 13/215 (6%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
+FAL G I L + S+++ ++II++ R L+ V
Sbjct: 1 MFALIQASGWP----IWPLLLASVIALALIIERLTTLRRSR---------IAPPDLLDKV 47
Query: 73 CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKL 132
L+ G A ++A S K G R+ +D + ++ + E+ L
Sbjct: 48 LADLRQKGVSGEMANRVAAHSPLGKVLAAGLRNVTSSRDVMKEAIEESGRVVAHELERFL 107
Query: 133 SFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPS 192
+ LG++++ L+G+ G ++GM+ F S + +N GI +L S LGL ++IP+
Sbjct: 108 TTLGTIAAISPLMGLFGTIVGMIDIFASQSAAGTNPQQLAQGISTALNSTGLGLIIAIPA 167
Query: 193 SIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEG 227
+I + F F ++ME A ++ +
Sbjct: 168 TIFWRHFRALVDSFVIEMEQQAIRLVEVVHGERRA 202
>gi|53715250|ref|YP_101242.1| putative biopolymer transport protein ExbB [Bacteroides fragilis
YCH46]
gi|60683184|ref|YP_213328.1| putative transport related membrane protein [Bacteroides fragilis
NCTC 9343]
gi|253566382|ref|ZP_04843836.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
gi|265767080|ref|ZP_06094909.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
gi|52218115|dbj|BAD50708.1| putative biopolymer transport protein ExbB [Bacteroides fragilis
YCH46]
gi|60494618|emb|CAH09419.1| putative transport related membrane protein [Bacteroides fragilis
NCTC 9343]
gi|251945486|gb|EES85924.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
gi|263253457|gb|EEZ24933.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
gi|301164704|emb|CBW24263.1| putative transport related membrane protein [Bacteroides fragilis
638R]
Length = 240
Score = 119 bits (300), Expect = 2e-25, Method: Composition-based stats.
Identities = 38/226 (16%), Positives = 95/226 (42%), Gaps = 22/226 (9%)
Query: 7 AIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFW-- 64
A ++++ + ++ G I+ +L + S++ + ++ +++ ++ F +
Sbjct: 30 APAEMNMLDMAIKGGW----IMIVLAVLSVVCFYILFERNYMIRKAGKEDPMFMEKIKDY 85
Query: 65 -SGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAR 123
+++ + N A + +S + + + ++
Sbjct: 86 IHSGEIKSAINYCRTI-NTPSARMIEKGISRLGRPVND-----------VQVAIENVGNI 133
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV---VSIPGIIESLI 180
E+ ++ + L+ + ++S ++G LG V GM+ F +A S N+ + GI E++I
Sbjct: 134 EVAKLEKGLTVMATISGGAPMLGFLGTVTGMVRAFYEMANAGSGNIDITLLSGGIYEAMI 193
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+ + GL V I + AYN + + +ME EF +L+ +
Sbjct: 194 TTVGGLIVGIIAMFAYNYLVMLVDRVVNKMESRTMEFMDLLNEPAQ 239
>gi|254239070|ref|ZP_04932393.1| transport protein ExbB2 [Pseudomonas aeruginosa C3719]
gi|126171001|gb|EAZ56512.1| transport protein ExbB2 [Pseudomonas aeruginosa C3719]
Length = 615
Score = 119 bits (300), Expect = 2e-25, Method: Composition-based stats.
Identities = 50/208 (24%), Positives = 95/208 (45%), Gaps = 8/208 (3%)
Query: 24 VKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS----LETVCKSLKNH 79
II +L + + SW ++ +K+ N + R F + F + L +
Sbjct: 387 AWVIIAILALMMVQSWVIMYRKNQNVGRVSRANGLFRERFAEVGTRLELLADDRELAARL 446
Query: 80 HNIGLAAIFMSAMSEWKKSCDKGARSP---IGIQDRIDRMMDVAIARELEEITEKLSFLG 136
+ L ++ A+ E + ++GA + + I MD +E +++ +LS L
Sbjct: 447 QHSSLWRLYQVAVKEIRTRREQGADTSSVSAATIEAIRASMDGVRTKENQQLGSRLSSLS 506
Query: 137 SMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIA 195
+ + G +G+LG VLG+M F A N+ PG+ +L++ +GL V+IP+
Sbjct: 507 NAIAGGPYIGLLGTVLGIMVVFLGTAMAGDVNINAIAPGMAAALLATAMGLFVAIPALFG 566
Query: 196 YNKFIEDSKKFAMQMEGFANEFSAILSR 223
YN+ + +K+ + M F +EF L+
Sbjct: 567 YNRLVTRNKEVSADMRVFVDEFVTRLAE 594
>gi|107100158|ref|ZP_01364076.1| hypothetical protein PaerPA_01001180 [Pseudomonas aeruginosa PACS2]
gi|116048599|ref|YP_792602.1| transport protein ExbB2 [Pseudomonas aeruginosa UCBPP-PA14]
gi|218893349|ref|YP_002442218.1| transport protein ExbB2 [Pseudomonas aeruginosa LESB58]
gi|254244930|ref|ZP_04938252.1| transport protein ExbB2 [Pseudomonas aeruginosa 2192]
gi|313105520|ref|ZP_07791789.1| transport protein ExbB2 [Pseudomonas aeruginosa 39016]
gi|115583820|gb|ABJ09835.1| transport protein ExbB2 [Pseudomonas aeruginosa UCBPP-PA14]
gi|126198308|gb|EAZ62371.1| transport protein ExbB2 [Pseudomonas aeruginosa 2192]
gi|218773577|emb|CAW29391.1| transport protein ExbB2 [Pseudomonas aeruginosa LESB58]
gi|310878291|gb|EFQ36885.1| transport protein ExbB2 [Pseudomonas aeruginosa 39016]
Length = 615
Score = 119 bits (300), Expect = 2e-25, Method: Composition-based stats.
Identities = 50/208 (24%), Positives = 95/208 (45%), Gaps = 8/208 (3%)
Query: 24 VKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS----LETVCKSLKNH 79
II +L + + SW ++ +K+ N + R F + F + L +
Sbjct: 387 AWVIIAILALMMVQSWVIMYRKNQNVGRVSRANGLFRERFAEVGTRLELLADDRELAARL 446
Query: 80 HNIGLAAIFMSAMSEWKKSCDKGARSP---IGIQDRIDRMMDVAIARELEEITEKLSFLG 136
+ L ++ A+ E + ++GA + + I MD +E +++ +LS L
Sbjct: 447 QHSSLWRLYQVAVKEIRTRREQGADTSSVSAATIEAIRASMDGVRTKENQQLGSRLSSLS 506
Query: 137 SMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIA 195
+ + G +G+LG VLG+M F A N+ PG+ +L++ +GL V+IP+
Sbjct: 507 NAIAGGPYIGLLGTVLGIMVVFLGTAMAGDVNINAIAPGMAAALLATAMGLFVAIPALFG 566
Query: 196 YNKFIEDSKKFAMQMEGFANEFSAILSR 223
YN+ + +K+ + M F +EF L+
Sbjct: 567 YNRLVTRNKEVSADMRVFVDEFVTRLAE 594
>gi|121602392|ref|YP_988511.1| putative tonB-system energizer ExbB [Bartonella bacilliformis
KC583]
gi|120614569|gb|ABM45170.1| putative tonB-system energizer ExbB [Bartonella bacilliformis
KC583]
Length = 323
Score = 119 bits (300), Expect = 2e-25, Method: Composition-based stats.
Identities = 29/122 (23%), Positives = 57/122 (46%), Gaps = 1/122 (0%)
Query: 106 PIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYY 165
G+++R+ ++ ++ + + + L ++ + VG+ V G+M F IA
Sbjct: 193 HEGVKERVHSLLSRSLLVATQRMAAGNAILATIGAISPFVGLFATVWGIMNSFIGIAKTQ 252
Query: 166 SNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+ + V PGI E+L++ LGL V+IP+ + YN + + A +LSR
Sbjct: 253 TTRLDVVAPGIAEALLATALGLFVAIPAVVMYNGLSRALSHYRSDLGNVAAAIERLLSRD 312
Query: 225 TE 226
+
Sbjct: 313 MD 314
Score = 87.2 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 34/78 (43%)
Query: 7 AIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG 66
A D S +FM VK ++ LL + SI+SW++ K V +R+ R
Sbjct: 17 AAHDFSPLGMFMAADFVVKAVMVLLILASIVSWTIAFAKIVEITLAKRKARRALHSAQQA 76
Query: 67 QSLETVCKSLKNHHNIGL 84
Q+L + L+N +
Sbjct: 77 QTLACLVDQLQNQTGASV 94
>gi|330900779|gb|EGH32198.1| biopolymer transport protein ExbB [Pseudomonas syringae pv.
japonica str. M301072PT]
Length = 145
Score = 119 bits (300), Expect = 3e-25, Method: Composition-based stats.
Identities = 40/146 (27%), Positives = 73/146 (50%), Gaps = 7/146 (4%)
Query: 22 LAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHN 81
+ V ++ L +FS+LSW++++ KS ++ + Q ++F ++FWS L T + +
Sbjct: 1 MIVPAVLWALILFSVLSWALLLIKSAQYVRQKSQNKQFTKVFWSAPDLLTAAEHSAQYPG 60
Query: 82 IGLAAIFMS-----AMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLG 136
LA I S A+ E ++ + A + I DR++R + I +E + + L
Sbjct: 61 -ALARIANSGIEAMAVDESPRTTQQLAHT-INRSDRLERNLRQQIQKERRALESGQAILA 118
Query: 137 SMSSAGLLVGILGAVLGMMGFFQSIA 162
S+ S +G+ G V G+M QSI
Sbjct: 119 SIGSTAPFIGLFGTVWGIMEALQSIG 144
>gi|257470246|ref|ZP_05634337.1| biopolymer transport exbB protein [Fusobacterium ulcerans ATCC
49185]
gi|317064459|ref|ZP_07928944.1| biopolymer transport exbB protein [Fusobacterium ulcerans ATCC
49185]
gi|313690135|gb|EFS26970.1| biopolymer transport exbB protein [Fusobacterium ulcerans ATCC
49185]
Length = 209
Score = 119 bits (300), Expect = 3e-25, Method: Composition-based stats.
Identities = 45/194 (23%), Positives = 93/194 (47%), Gaps = 6/194 (3%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAI 87
+ LL SI+ I++++ F+ + + + + + ++ K + I L
Sbjct: 12 MWLLAALSIVGLGTILERTAYFMKNEQGITTEFK-----EEIVNLVRAEKENEAIALCDK 66
Query: 88 FMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGI 147
+++S KS R+ + + +++M ++E + +LS LG ++ + G+
Sbjct: 67 TNNSVSRTVKSILLAYRNENDLYESKEKLMKEKALEQIENLERRLSILGIVAYISPMAGL 126
Query: 148 LGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKF 206
LG VLGM+ F++IA + + V GI E+L++ GL ++IP+ IAY F + K
Sbjct: 127 LGTVLGMIKSFKAIALQGAGDPNVVANGISEALLTTAAGLFIAIPAIIAYQTFSRKADKI 186
Query: 207 AMQMEGFANEFSAI 220
+++E + I
Sbjct: 187 MLEIEKTSTALINI 200
>gi|255534208|ref|YP_003094579.1| MotA/TolQ/ExbB family biopolymer transport prote in
[Flavobacteriaceae bacterium 3519-10]
gi|255340404|gb|ACU06517.1| MotA/TolQ/ExbB family biopolymer transport prote in
[Flavobacteriaceae bacterium 3519-10]
Length = 226
Score = 119 bits (299), Expect = 3e-25, Method: Composition-based stats.
Identities = 39/223 (17%), Positives = 87/223 (39%), Gaps = 17/223 (7%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE---QLFW 64
S++ + G+ I+ +F+ IL+ + ++ + ++ F + F
Sbjct: 16 THVFSLWNILFSGGILGNSIMIAIFLLGILALYIFFERYLFIKRSSKETPNFLENIKDFV 75
Query: 65 SGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARE 124
++T K + A + ++ + I M E
Sbjct: 76 QEGKIQTAVDYCKTI-DSPEARMIEKGLARIGRPISD-----------ISNAMQNQGQLE 123
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSN--NVVSIPGIIESLISI 182
+ ++ + L+ L S S A ++G LG V+GM+ F I+ + GI ++ +
Sbjct: 124 VSKLEKNLNILASASGAAPMLGFLGTVVGMIMAFFEISNVTGAVSPKLLASGIYTAMATT 183
Query: 183 LLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+GL V IP+ YN + + + ++++ N+F L++
Sbjct: 184 AVGLFVGIPAYFFYNILVTNVDRLVLKIQTHVNDFLDALNKPL 226
>gi|88810579|ref|ZP_01125836.1| MotA/TolQ/ExbB proton channel family protein [Nitrococcus mobilis
Nb-231]
gi|88792209|gb|EAR23319.1| MotA/TolQ/ExbB proton channel family protein [Nitrococcus mobilis
Nb-231]
Length = 262
Score = 119 bits (299), Expect = 3e-25, Method: Composition-based stats.
Identities = 50/210 (23%), Positives = 93/210 (44%), Gaps = 16/210 (7%)
Query: 27 IITLLFIFSILSWSVIIQKSVNFITL----RRQFREFEQLFWSGQSLETVCKSLKNHHNI 82
++ +L SI++ +++ K F +L RR RE +L+ G+ E V L
Sbjct: 31 VVVILGFMSIIALTILFLKLWQFRSLQLGDRRTAREMLRLYRGGRGKEAVA--LACRSRN 88
Query: 83 GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAG 142
+A + A+ ++S A R+ + A +LE + L ++S
Sbjct: 89 PVAQVLALAIRGRRRSELSEA--------RVREEVVRVAADQLEALRSYFRPLEVIASLA 140
Query: 143 LLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFI 200
L+G+ G VLGM+ FQ + AG + + GI E+L++ +GL V+IP + N
Sbjct: 141 PLLGLFGTVLGMITAFQQLQQAGNQVDPAILSGGIWEALLTTAVGLGVAIPVVVVINWLE 200
Query: 201 EDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
+ A +M+ + + QT +++
Sbjct: 201 RKIDRLAHEMQSTVTQVFTLDLLQTAEDLA 230
>gi|325280589|ref|YP_004253131.1| MotA/TolQ/ExbB proton channel [Odoribacter splanchnicus DSM 20712]
gi|324312398|gb|ADY32951.1| MotA/TolQ/ExbB proton channel [Odoribacter splanchnicus DSM 20712]
Length = 272
Score = 119 bits (299), Expect = 3e-25, Method: Composition-based stats.
Identities = 38/220 (17%), Positives = 94/220 (42%), Gaps = 21/220 (9%)
Query: 7 AIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS- 65
A ++S++++ ++ G + +FI SI++ + ++ + R F
Sbjct: 59 AEPELSLWSMIVKGGWL----MIPIFILSIIAVYIFCERYMLLRKYTRISDTFPDKIRDC 114
Query: 66 --GQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAR 123
++ ++ N N ++ + + + ++ + + +++ A
Sbjct: 115 IFAGNIRGAV-TVCNEENTPMSRMLVKGLLHYRLPVTE-----------LRAIVESAANL 162
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI--PGIIESLIS 181
E+ + + LS L + + ++G LG V+GM+ F +A +N +++ GI ++I+
Sbjct: 163 EVAGMEKGLSTLATCAGMAPMIGFLGTVVGMVQAFYDMAMAGNNINITLLSRGIYTAMIT 222
Query: 182 ILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+ GL V I + AYN +ME + +F ++
Sbjct: 223 TVAGLIVGIIAYFAYNALTAKIDHIVTKMETASADFMEVI 262
>gi|330809629|ref|YP_004354091.1| transport-related membrane protein ExbB2 [Pseudomonas
brassicacearum subsp. brassicacearum NFM421]
gi|327377737|gb|AEA69087.1| putative transport-related membrane protein ExbB2 [Pseudomonas
brassicacearum subsp. brassicacearum NFM421]
Length = 599
Score = 119 bits (299), Expect = 3e-25, Method: Composition-based stats.
Identities = 55/208 (26%), Positives = 95/208 (45%), Gaps = 8/208 (3%)
Query: 24 VKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS-GQSLETVCKS---LKNH 79
II +L + SW ++I+K+ L F + F G LE +
Sbjct: 368 AWVIIGVLVLMMFQSWIIMIRKNRMVSRLSAANDAFREQFAQIGTRLEMFADDQGLAQRL 427
Query: 80 HNIGLAAIFMSAMSEWKKSCDKGARSP---IGIQDRIDRMMDVAIARELEEITEKLSFLG 136
+ L +++ A+ E + ++GA + + I MD RE + ++ KLS L
Sbjct: 428 QHSSLWRLYLVAVKEIRTRREQGADTSSVSAATIEAIRCSMDGVRTRENQALSSKLSTLS 487
Query: 137 SMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIA 195
+ + G +G+LG VLG+M F A N+ PG+ +L++ +GL V+IP+
Sbjct: 488 NAIAGGPYIGLLGTVLGIMVVFLGTAMAGDVNINAIAPGMAAALLATAMGLFVAIPALFG 547
Query: 196 YNKFIEDSKKFAMQMEGFANEFSAILSR 223
YN+ I +K+ + M F +EF L+
Sbjct: 548 YNRLITRNKEVSADMRVFVDEFITRLAE 575
>gi|255011374|ref|ZP_05283500.1| putative transport related membrane protein [Bacteroides fragilis
3_1_12]
gi|313149189|ref|ZP_07811382.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
gi|313137956|gb|EFR55316.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
Length = 240
Score = 119 bits (299), Expect = 3e-25, Method: Composition-based stats.
Identities = 38/226 (16%), Positives = 95/226 (42%), Gaps = 22/226 (9%)
Query: 7 AIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFW-- 64
A ++++ + ++ G I+ +L + S++ + ++ +++ ++ F +
Sbjct: 30 APAEMNMLDMAIKGGW----IMIVLGVLSVVCFYILFERNYVIRKAGKEDPMFMEKIKDY 85
Query: 65 -SGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAR 123
+++ + N A + +S + + + ++
Sbjct: 86 IHSGEIKSAINYCRTM-NTPSARMIEKGISRLGRPVND-----------VQVAIENVGNI 133
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV---VSIPGIIESLI 180
E+ ++ + L+ + ++S ++G LG V GM+ F +A S N+ + GI E++I
Sbjct: 134 EVAKLEKGLTVMATISGGAPMLGFLGTVTGMVRAFYEMANAGSGNIDITLLSGGIYEAMI 193
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+ + GL V I + AYN + + +ME EF +L+ +
Sbjct: 194 TTVGGLIVGIIAMFAYNYLVMLVDRVVNKMESRTMEFMDLLNEPAQ 239
>gi|283138918|gb|ADB12521.1| hypothetical protein [uncultured bacterium 9F08]
Length = 208
Score = 119 bits (299), Expect = 3e-25, Method: Composition-based stats.
Identities = 44/220 (20%), Positives = 89/220 (40%), Gaps = 20/220 (9%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS---GQSL 69
+F L G + + + SI++ ++I ++ + W + L
Sbjct: 1 MFELVTAGGWL----MVPIILCSIVAVAIIGERFWALKQEKVVPANLVAQVWQLHQRREL 56
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+ +L L I + + + + + ++ + + E+
Sbjct: 57 DNQRLTL-LRDGSPLGRILAAGLVNMQHER-----------EVMKEAIEETGRQVVIELE 104
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYY-SNNVVSIPGIIESLISILLGLCV 188
L+ LG+++S L+G+LG V+GM+ F +I N V GI E+LI+ GL V
Sbjct: 105 RFLNTLGTIASITPLLGLLGTVIGMIKVFAAITSQGVGNPAVLAGGISEALITTAAGLSV 164
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
+IPS + Y F + ++ME A + ++ + E +
Sbjct: 165 AIPSLMFYRYFRGKVEMLVIKMEEQALKLVEVIHGEREAD 204
>gi|167721229|ref|ZP_02404465.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Burkholderia pseudomallei DM98]
Length = 131
Score = 119 bits (299), Expect = 3e-25, Method: Composition-based stats.
Identities = 30/112 (26%), Positives = 53/112 (47%), Gaps = 1/112 (0%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+R+ R + A+ + L S+ S VG+LG V G+ SIA +
Sbjct: 4 ERVLRALRHALRASQRRLEFGQVLLASIGSTAPFVGLLGTVWGIYHALGSIAASGQAQIE 63
Query: 171 SIPG-IIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
++ G + E+LI GL V+IP+ +AYN ++ +++GFA + +
Sbjct: 64 NVAGPVGEALIMTAFGLVVAIPAVLAYNILGRLVRQLVEELDGFARDLHVFV 115
>gi|270295800|ref|ZP_06202000.1| conserved hypothetical protein [Bacteroides sp. D20]
gi|270273204|gb|EFA19066.1| conserved hypothetical protein [Bacteroides sp. D20]
Length = 238
Score = 119 bits (299), Expect = 3e-25, Method: Composition-based stats.
Identities = 37/225 (16%), Positives = 96/225 (42%), Gaps = 21/225 (9%)
Query: 7 AIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS- 65
A +++++++ ++ G I+ +L + S L + ++ +++ ++ +F
Sbjct: 30 ASDEMNLWSMAVKGGW----IMVVLGLMSGLCFYILFERNYVIRKAGKEDPQFMDKIKDY 85
Query: 66 --GQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAR 123
G L+ ++ + A + +S + + + ++
Sbjct: 86 ILGGELKAAIAYCRS-VDTPSARMIEKGISRLGRPVND-----------VQAAIENVGNF 133
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI--PGIIESLIS 181
E+ ++ + ++ + ++S ++G LG V GM+ F +A +N +++ GI E++I+
Sbjct: 134 EVAKLEKGMTIMATISGGAPMLGFLGTVTGMVRAFWQMANAGNNIDITMLSGGIYEAMIT 193
Query: 182 ILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+ GL V I + AYN + +ME F +L+ +
Sbjct: 194 TVGGLIVGIIAMFAYNYLVTLIDGVVNKMEAKTMAFMDLLNEPAK 238
>gi|262374147|ref|ZP_06067424.1| TolQ [Acinetobacter junii SH205]
gi|262311158|gb|EEY92245.1| TolQ [Acinetobacter junii SH205]
Length = 206
Score = 119 bits (299), Expect = 3e-25, Method: Composition-based stats.
Identities = 39/211 (18%), Positives = 84/211 (39%), Gaps = 33/211 (15%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
M+ S++ + K + +L SI +W++ I + + L++Q + S
Sbjct: 1 MNFSVY--WQHADAVSKTLYFILLAMSIATWTIFILRLMGTRQLKQQAYAQLAQ--ALTS 56
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
L++ + L +A ++ + I+ E +
Sbjct: 57 LKSKLQPLTFEQRKAVA----------------------------EQALLRQISAEKSQA 88
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISILLGLC 187
+ +S LG+++S VG+ G V G+ ++ + + + E+LI LGL
Sbjct: 89 EKGVSVLGTIASIAPFVGLFGTVWGIFHALVAVGKSGQAGLAQVATPVGEALIMTGLGLA 148
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFS 218
V+IP+ +AYN + ++ A ++ A+
Sbjct: 149 VAIPAVLAYNICVRFNRGLAHDLQDQAHSLL 179
>gi|15595890|ref|NP_249384.1| transport protein ExbB2 [Pseudomonas aeruginosa PAO1]
gi|9946575|gb|AAG04082.1|AE004505_3 transport protein ExbB2 [Pseudomonas aeruginosa PAO1]
Length = 615
Score = 119 bits (299), Expect = 3e-25, Method: Composition-based stats.
Identities = 50/208 (24%), Positives = 95/208 (45%), Gaps = 8/208 (3%)
Query: 24 VKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS----LETVCKSLKNH 79
II +L + + SW ++ +K+ N + R F + F + L +
Sbjct: 387 AWVIIAILALMMVQSWVIMYRKNQNVGRVSRANGLFRERFAEVGTRLELLADDRELAARL 446
Query: 80 HNIGLAAIFMSAMSEWKKSCDKGARSP---IGIQDRIDRMMDVAIARELEEITEKLSFLG 136
+ L ++ A+ E + ++GA + + I MD +E +++ +LS L
Sbjct: 447 QHSSLWRLYQVAVKEIRTRREQGADTSSVSAATIEAIRASMDGVRTKENQQLGSRLSSLS 506
Query: 137 SMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIA 195
+ + G +G+LG VLG+M F A N+ PG+ +L++ +GL V+IP+
Sbjct: 507 NAIAGGPYIGLLGTVLGIMVVFLGTAMAGDVNINAIAPGMAAALLATAMGLFVAIPALFG 566
Query: 196 YNKFIEDSKKFAMQMEGFANEFSAILSR 223
YN+ + +K+ + M F +EF L+
Sbjct: 567 YNRLVTRNKEVSADMRVFVDEFVTRLAE 594
>gi|108761427|ref|YP_634605.1| MotA/TolQ/ExbB proton channel family protein [Myxococcus xanthus DK
1622]
gi|108465307|gb|ABF90492.1| MotA/TolQ/ExbB proton channel family protein [Myxococcus xanthus DK
1622]
Length = 240
Score = 119 bits (299), Expect = 3e-25, Method: Composition-based stats.
Identities = 43/198 (21%), Positives = 87/198 (43%), Gaps = 18/198 (9%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLA 85
++ +L I S+LS +++++++V F R E L + G
Sbjct: 32 WVLWVLVILSVLSIAIMLERTVYFARHRLPDSEAL-----AVRLARGEYDVARKAIEGKT 86
Query: 86 AIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLV 145
+ + + E S D+GA D +++++ ++RE + LS+LG++ + +
Sbjct: 87 GMEAAIIREALASADQGA-------DTVEQVIASTLSRERPQYERFLSYLGTLGNNAPFI 139
Query: 146 GILGAVLGMMGFFQSIA------GYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKF 199
G+ G VLG++ F + G + + GI E+L++ +GL V+IP+ +A+N F
Sbjct: 140 GLFGTVLGIIKAFNDLGKMNAQGGGGAMQQTVMAGISEALVATAVGLAVAIPAVVAFNVF 199
Query: 200 IEDSKKFAMQMEGFANEF 217
K +
Sbjct: 200 NRQLKTLTSRANALGYAL 217
>gi|153003268|ref|YP_001377593.1| MotA/TolQ/ExbB proton channel [Anaeromyxobacter sp. Fw109-5]
gi|152026841|gb|ABS24609.1| MotA/TolQ/ExbB proton channel [Anaeromyxobacter sp. Fw109-5]
Length = 229
Score = 119 bits (298), Expect = 4e-25, Method: Composition-based stats.
Identities = 38/200 (19%), Positives = 84/200 (42%), Gaps = 8/200 (4%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG---QSLETVCKSLKNHHNIGL 84
+ ++ S+L+ +V I++++ + R LE +
Sbjct: 15 MWIIGACSVLALAVAIERAIALWGFAARARTVADAVVRALLRGDLEEARAECE-RSPSPA 73
Query: 85 AAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLL 144
A +F++ ++ + +G ++ID ++ + + + LG++ +
Sbjct: 74 ADVFLAGLAAAGRRAARGGLPDP---EKIDAAVERERQQMNLRLRRNVWVLGTVGAIAPF 130
Query: 145 VGILGAVLGMMGFFQSIAGYYSNN-VVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDS 203
+G+ G V+G+M F+ +A V GI E+L++ G+ V+I + + YN F
Sbjct: 131 IGLFGTVVGIMQAFRHMAATGQGGFTVVASGISEALVATAGGIAVAIEAVVIYNFFNVHV 190
Query: 204 KKFAMQMEGFANEFSAILSR 223
+K A+Q++ EF L
Sbjct: 191 QKLALQLKLMVEEFLETLHE 210
>gi|124002252|ref|ZP_01687106.1| MotA/TolQ/ExbB proton channel family protein [Microscilla marina
ATCC 23134]
gi|123992718|gb|EAY32063.1| MotA/TolQ/ExbB proton channel family protein [Microscilla marina
ATCC 23134]
Length = 216
Score = 119 bits (298), Expect = 4e-25, Method: Composition-based stats.
Identities = 41/202 (20%), Positives = 87/202 (43%), Gaps = 16/202 (7%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE---TVCKSLKNHHNIGL 84
+ +F S+++ + I++ V + F + + L+ K + + +
Sbjct: 27 MYPIFFLSVVAVYIFIERLVVIRGAMKNPANFMKQIKK-KVLDGDIEGAKVICKRNKTPI 85
Query: 85 AAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLL 144
A + +S S I+ ++ EL + + L+ L +++ A +
Sbjct: 86 ARMVAKGLSRVGSSLK-----------NIETSIEYVGKIELYRLEKNLAMLATIAGAAPM 134
Query: 145 VGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISILLGLCVSIPSSIAYNKFIEDS 203
VG LG V+GM+G F I+ + + + GI +L++ GL V I ++++YN +
Sbjct: 135 VGFLGTVVGMIGAFIRISQQSTVSPQVLSQGIYTALLTTAGGLIVGILANVSYNYLMTKV 194
Query: 204 KKFAMQMEGFANEFSAILSRQT 225
+K QME + +F +L +
Sbjct: 195 QKVIHQMEYVSMDFMDLLQEPS 216
>gi|30249158|ref|NP_841228.1| MotA/TolQ/ExbB proton channel family protein [Nitrosomonas europaea
ATCC 19718]
gi|30180477|emb|CAD85082.1| MotA/TolQ/ExbB proton channel family [Nitrosomonas europaea ATCC
19718]
Length = 202
Score = 119 bits (298), Expect = 4e-25, Method: Composition-based stats.
Identities = 38/217 (17%), Positives = 89/217 (41%), Gaps = 19/217 (8%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
+F++ G I + + S+L+ +I ++ + + R + +
Sbjct: 1 MFSIIQAAGWP----IWPIILASVLAVGIIGERLWSLRRSKVSPR------------DLL 44
Query: 73 CKSLKNHHNIGLAAIFMSAMSEWKKSCD---KGARSPIGIQDRIDRMMDVAIARELEEIT 129
+ L+ + G+ ++ + E G ++ ++ + ++ A E+
Sbjct: 45 PRVLQEYRRSGVHTDTLTRLQEHSPLGQVLVAGLKNIDSPREAMKESIEEAGRVAAHELE 104
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVS 189
L+ LG+++S L+G+ G ++GM+ F S N + GI +L + G+ V+
Sbjct: 105 RYLTTLGTIASLSPLMGLFGTLIGMIEIFGSGTPTGGNPIQLAHGISVALYNAAFGILVA 164
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
IPS + Y F + ++ME A + ++ +
Sbjct: 165 IPSIVFYRYFRAKVDELVLEMELQALKLVEVVHGERR 201
>gi|229589913|ref|YP_002872032.1| putative transporter-like membrane protein [Pseudomonas fluorescens
SBW25]
gi|229361779|emb|CAY48661.1| putative transport-related membrane protein [Pseudomonas
fluorescens SBW25]
Length = 599
Score = 119 bits (298), Expect = 4e-25, Method: Composition-based stats.
Identities = 54/219 (24%), Positives = 94/219 (42%), Gaps = 9/219 (4%)
Query: 14 FALFMQMGLA-VKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS-GQSLET 71
+ II +L SW ++++K+ L F + F G LE
Sbjct: 359 LGFLLNAVPVDAWVIILVLVAMMFQSWVIMLRKNRQVSRLSSANEVFREHFAQIGTRLEM 418
Query: 72 VCKSLK---NHHNIGLAAIFMSAMSEWKKSCDKGARSP---IGIQDRIDRMMDVAIAREL 125
+ + L +++ A+ E + +GA + + I MD RE
Sbjct: 419 YADDAQLGERLTHSSLWRLYLVAVKEIRTRRAQGADTSSVSAATIEAIRCSMDGVRTREN 478
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILL 184
+ ++ KLS L + + G +G+LG VLG+M F A N+ PG+ +L++ +
Sbjct: 479 QALSSKLSTLSNAIAGGPYIGLLGTVLGIMVVFLGTAMAGDVNINAIAPGMAAALLATAM 538
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
GL V+IP+ YN+ I +K+ + M F +EF L+
Sbjct: 539 GLFVAIPALFGYNRLITRNKEVSADMRVFVDEFITRLAE 577
>gi|70730188|ref|YP_259927.1| transport protein ExbB2 [Pseudomonas fluorescens Pf-5]
gi|68344487|gb|AAY92093.1| transport protein ExbB2 PA0693 [Pseudomonas fluorescens Pf-5]
Length = 605
Score = 119 bits (298), Expect = 4e-25, Method: Composition-based stats.
Identities = 54/219 (24%), Positives = 96/219 (43%), Gaps = 9/219 (4%)
Query: 14 FALFMQMGLA-VKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS-GQSLET 71
++ II +L I SW ++++K+ + F + F G LE
Sbjct: 363 LGFLLKAVPVDAWVIILVLVGMMIQSWVIMLRKNRMVGRVSAANALFREQFAKVGTRLEM 422
Query: 72 VCKS---LKNHHNIGLAAIFMSAMSEWKKSCDKGARSP---IGIQDRIDRMMDVAIAREL 125
+ L +++ A+ E + ++GA + + I MD RE
Sbjct: 423 FADDQVLASRLEHSSLWRLYLVAVKEIRTRREQGADTSSVSAATIEAIRCSMDGVRTREN 482
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILL 184
++++ KLS L + + G +G+LG VLG+M F A N+ PG+ +L++ +
Sbjct: 483 QQLSSKLSTLSNAIAGGPYIGLLGTVLGIMVVFLGTAMAGDVNINAIAPGMAAALLATAM 542
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
GL V+IP+ YN+ I +K+ M F +EF L+
Sbjct: 543 GLFVAIPALFGYNRLITRNKEVGADMRVFVDEFITRLAE 581
>gi|167740202|ref|ZP_02412976.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Burkholderia pseudomallei 14]
gi|167817417|ref|ZP_02449097.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Burkholderia pseudomallei 91]
Length = 140
Score = 119 bits (298), Expect = 4e-25, Method: Composition-based stats.
Identities = 30/112 (26%), Positives = 53/112 (47%), Gaps = 1/112 (0%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+R+ R + A+ + L S+ S VG+LG V G+ SIA +
Sbjct: 13 ERVLRALRHALRASQRRLEFGQVLLASIGSTAPFVGLLGTVWGIYHALGSIAASGQAQIE 72
Query: 171 SIPG-IIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
++ G + E+LI GL V+IP+ +AYN ++ +++GFA + +
Sbjct: 73 NVAGPVGEALIMTAFGLVVAIPAVLAYNILGRLVRQLVEELDGFARDLHVFV 124
>gi|94499586|ref|ZP_01306123.1| Biopolymer transport protein [Oceanobacter sp. RED65]
gi|94428340|gb|EAT13313.1| Biopolymer transport protein [Oceanobacter sp. RED65]
Length = 209
Score = 119 bits (298), Expect = 4e-25, Method: Composition-based stats.
Identities = 44/204 (21%), Positives = 85/204 (41%), Gaps = 18/204 (8%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV----CKSLKNHHNIG 83
+ L + S+L+ ++ I++ + W+ + K +K ++G
Sbjct: 12 MVPLLLASVLAVAICIERFWTLRPSNIAPKHLLAEMWALIKKNELTPTRLKQIKQESHLG 71
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
+ G + +D ++ A ++ + ++ L+ LG++++
Sbjct: 72 SVLVA-------------GLTNSKHGRDITKEAIEQAASQSIHDMERFLTALGTIAAVTP 118
Query: 144 LVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIED 202
L+G+LG VLGM+ F I + N V GI E+LI+ G+ V+IPS I Y F
Sbjct: 119 LMGLLGTVLGMISVFNEIMAQGTGNAAVLAGGISEALITTAAGMIVAIPSLICYRIFTRR 178
Query: 203 SKKFAMQMEGFANEFSAILSRQTE 226
+ + ME A + +L E
Sbjct: 179 IDEIVVFMEQEAMKLVDVLHGDRE 202
>gi|124267669|ref|YP_001021673.1| putative biopolymer transport exbB-like transmembrane protein
[Methylibium petroleiphilum PM1]
gi|124260444|gb|ABM95438.1| putative biopolymer transport exbB-like transmembrane protein
[Methylibium petroleiphilum PM1]
Length = 213
Score = 118 bits (297), Expect = 5e-25, Method: Composition-based stats.
Identities = 49/222 (22%), Positives = 90/222 (40%), Gaps = 22/222 (9%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLR----RQFREFEQLFWSGQS 68
+F++ G I L + SI++ +++I++ + T+R R E +
Sbjct: 1 MFSIIQAAGWP----IWPLILCSIVALALVIERFSSLRTVRVVPQRLLDEVISVTSKSLP 56
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
V L + +G ++ S + P +D + + A + +
Sbjct: 57 APEVVNKLSANSVLG--SVLASGLRAV-------IADPRITEDGLRIAFETAGRAAVHRL 107
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQS-----IAGYYSNNVVSIPGIIESLISIL 183
L+ LG+++SA L+G+ G V+GM+ F S AG N GI +L +
Sbjct: 108 ERYLNTLGTIASAAPLLGLFGTVVGMIEIFGSQAPATTAGVGGNPEQLAHGISIALYNTA 167
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
GL V+IPS + Y F ++ + +E + L R T
Sbjct: 168 FGLVVAIPSLMFYRYFRGRVDEYTIDLEQASERIMPHLLRFT 209
>gi|254302837|ref|ZP_04970195.1| ligand gated channel protein TolQ [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
gi|148323029|gb|EDK88279.1| ligand gated channel protein TolQ [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
Length = 202
Score = 118 bits (297), Expect = 5e-25, Method: Composition-based stats.
Identities = 44/202 (21%), Positives = 91/202 (45%), Gaps = 15/202 (7%)
Query: 27 IITLLFIFSILSWSVIIQKSVNFITLRRQ----FREFEQLFWSGQSLETVCKSLKNHHNI 82
I+ +L I SI +++V++++ V F + F++ + + L+ +
Sbjct: 11 ILWVLVIISIGAFAVVLERIVFFARNEKNVGSNFKDEILSLVASKKLDEAIALCDTKKSC 70
Query: 83 GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAG 142
SA+ ++ + KG I +QD + ++ +E +L+ L S+ S
Sbjct: 71 -----VASAVKKFLQKAPKG----IDVQDY-EFILKEITIKETSPYESRLNLLASVISIS 120
Query: 143 LLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISILLGLCVSIPSSIAYNKFIE 201
++G+LG V GM+ F +I+ Y + + + GI E+L++ GL ++IP + YN
Sbjct: 121 PMLGLLGTVTGMIRAFTNISKYGAGDAAIVADGIAEALLTTAAGLMIAIPVIVVYNYLNR 180
Query: 202 DSKKFAMQMEGFANEFSAILSR 223
+K +++ I R
Sbjct: 181 RLEKMENEIDDVVTNIINIFRR 202
>gi|295086525|emb|CBK68048.1| outer membrane transport energization protein ExbB (TC 2.C.1.1.1)
[Bacteroides xylanisolvens XB1A]
Length = 238
Score = 118 bits (297), Expect = 5e-25, Method: Composition-based stats.
Identities = 37/224 (16%), Positives = 94/224 (41%), Gaps = 20/224 (8%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
++++ + ++ G I+ +L + S++ + ++ +++ ++ F +
Sbjct: 30 APEMNMLDMAIKGGW----IMIVLGVLSVVCFYILFERNYMIRKAGKEDPMFMERIKDYI 85
Query: 68 SLETVCKSLK--NHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
+ + ++ N A + +S + + + ++ E+
Sbjct: 86 HSDEIKAAINYCRTINTPSARMIEKGISRLGRPIND-----------VQVAIENVGNIEV 134
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV---VSIPGIIESLISI 182
++ + L+ + ++S ++G LG V GM+ F +A S N+ + GI E++I+
Sbjct: 135 AKLEKGLTVMATISGGAPMLGFLGTVTGMVRAFYEMANAGSGNIDITLLSGGIYEAMITT 194
Query: 183 LLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+ GL V I + AYN + + +ME EF +L+ +
Sbjct: 195 VGGLIVGIIAMFAYNYLVMLVDRVVNKMESRTMEFMDLLNEPAK 238
>gi|73540301|ref|YP_294821.1| MotA/TolQ/ExbB proton channel [Ralstonia eutropha JMP134]
gi|72117714|gb|AAZ59977.1| MotA/TolQ/ExbB proton channel [Ralstonia eutropha JMP134]
Length = 231
Score = 118 bits (297), Expect = 5e-25, Method: Composition-based stats.
Identities = 40/190 (21%), Positives = 76/190 (40%), Gaps = 13/190 (6%)
Query: 42 IIQKSVNFITLR----RQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKK 97
I+++ + + R + E ++ V +L+ N L + + +
Sbjct: 51 IVERFLTLKRSKVLPARLYEEALSAAQQRRATPEVVNTLEQ--NSPLGRVLAAGLRHV-- 106
Query: 98 SCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGF 157
P +D +++ A E+ L+ LG+++S L+G+LG V+GM+
Sbjct: 107 -----VLQPHTSRDAAKEVVEEAGRAVAHELERYLNALGTIASVAPLMGLLGTVIGMIEI 161
Query: 158 FQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEF 217
F S G +N GI +L + GL V+IP+ I + F + ++E A F
Sbjct: 162 FGSQGGTGANPEQLAHGISVALYNTAFGLIVAIPALIFWRYFRRRVDDYVAELEFRATAF 221
Query: 218 SAILSRQTEG 227
+ Q
Sbjct: 222 LDAILPQRRA 231
>gi|29349327|ref|NP_812830.1| putative biopolymer transport protein [Bacteroides thetaiotaomicron
VPI-5482]
gi|253570326|ref|ZP_04847735.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
gi|298384860|ref|ZP_06994419.1| MotA/TolQ/ExbB proton channel family protein [Bacteroides sp.
1_1_14]
gi|29341235|gb|AAO79024.1| putative biopolymer transport protein [Bacteroides thetaiotaomicron
VPI-5482]
gi|251840707|gb|EES68789.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
gi|298262004|gb|EFI04869.1| MotA/TolQ/ExbB proton channel family protein [Bacteroides sp.
1_1_14]
Length = 239
Score = 118 bits (297), Expect = 5e-25, Method: Composition-based stats.
Identities = 37/227 (16%), Positives = 96/227 (42%), Gaps = 22/227 (9%)
Query: 6 LAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFW- 64
++ ++++ + ++ G I+ +L + S++ + ++ +++ ++ F +
Sbjct: 28 VSAPEMNMLDMAIKGGW----IMIVLGVLSVVCFYILFERNYMIRKAGKEDPMFMERIKD 83
Query: 65 --SGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIA 122
++ + + N A + +S + + + ++
Sbjct: 84 YIHSGEIKAAIQYCRTM-NTPSARMIEKGISRLGRPIND-----------VQVAIENVGN 131
Query: 123 RELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV---VSIPGIIESL 179
E+ ++ + L+ + ++S ++G LG V GM+ F +A S N+ + GI E++
Sbjct: 132 LEVAKLEKGLTVMATISGGAPMLGFLGTVTGMVRAFYEMANAGSGNIDITLLSGGIYEAM 191
Query: 180 ISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
I+ + GL V I + AYN + + +ME EF +L+ +
Sbjct: 192 ITTVGGLIVGIIAMFAYNYLVMLVDRVVNKMEARTMEFMDLLNEPAQ 238
>gi|152984716|ref|YP_001350158.1| transport protein ExbB2 [Pseudomonas aeruginosa PA7]
gi|150959874|gb|ABR81899.1| transport protein ExbB2 [Pseudomonas aeruginosa PA7]
Length = 608
Score = 118 bits (297), Expect = 5e-25, Method: Composition-based stats.
Identities = 50/208 (24%), Positives = 95/208 (45%), Gaps = 8/208 (3%)
Query: 24 VKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS----LETVCKSLKNH 79
II +L + + SW ++ +K+ N + R F + F + L +
Sbjct: 380 AWVIIAILALMMVQSWVIMYRKNQNVGRVSRANGLFRERFAEVGTRLELLADDRELAARL 439
Query: 80 HNIGLAAIFMSAMSEWKKSCDKGARSP---IGIQDRIDRMMDVAIARELEEITEKLSFLG 136
+ L ++ A+ E + ++GA + + I MD +E +++ +LS L
Sbjct: 440 QHSSLWRLYQVAVKEIRTRREQGADTSSVSAATIEAIRASMDGVRTKENQQLGARLSSLS 499
Query: 137 SMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIA 195
+ + G +G+LG VLG+M F A N+ PG+ +L++ +GL V+IP+
Sbjct: 500 NAIAGGPYIGLLGTVLGIMVVFLGTAMAGDVNINAIAPGMAAALLATAMGLFVAIPALFG 559
Query: 196 YNKFIEDSKKFAMQMEGFANEFSAILSR 223
YN+ + +K+ + M F +EF L+
Sbjct: 560 YNRLVTRNKEVSADMRVFVDEFVTRLAE 587
>gi|120554663|ref|YP_959014.1| MotA/TolQ/ExbB proton channel [Marinobacter aquaeolei VT8]
gi|120324512|gb|ABM18827.1| MotA/TolQ/ExbB proton channel [Marinobacter aquaeolei VT8]
Length = 208
Score = 118 bits (297), Expect = 5e-25, Method: Composition-based stats.
Identities = 45/218 (20%), Positives = 93/218 (42%), Gaps = 14/218 (6%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
+F L G+ + + SIL+ ++I+++ R QS+ +
Sbjct: 1 MFELLKAGGIL----MVPIVACSILALAIILERIWTLRASR---------VAPPQSINEL 47
Query: 73 CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKL 132
+ +K G + A S + G + ++ + ++ ++ + E+ L
Sbjct: 48 WRWIKKKELNGRKLKALQASSPLGRILAGGLINAKHGREIMKESIEHEASQVIHELERFL 107
Query: 133 SFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV-SIPGIIESLISILLGLCVSIP 191
+ LG++++ L+G+LG V+GM+ F I N GI E+LI+ GL V+IP
Sbjct: 108 NPLGTIATITPLLGLLGTVIGMIKVFAEIQLAGVGNAGNLAGGISEALITTAAGLSVAIP 167
Query: 192 SSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNI 229
+ + + FI + + ME A + ++ E ++
Sbjct: 168 ALVCHRYFIRRVDELVVNMEQEAIKLVEVVHGDREIDV 205
>gi|74317528|ref|YP_315268.1| exbB-like biopolymer transport [Thiobacillus denitrificans ATCC
25259]
gi|74057023|gb|AAZ97463.1| probable exbB-like biopolymer transport [Thiobacillus denitrificans
ATCC 25259]
Length = 201
Score = 118 bits (297), Expect = 5e-25, Method: Composition-based stats.
Identities = 46/214 (21%), Positives = 89/214 (41%), Gaps = 21/214 (9%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQ----FREFEQLFWSGQS 68
+ A+ G V L + S+++ ++II+++ + T E +++
Sbjct: 1 MLAIIEAAGWPV----WPLILASVIAVAIIIERAYSLRTREVAPAGLLLETIKVYQERGV 56
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ L + N L IF +A+ S + + ++ A ++
Sbjct: 57 STELVSHLAD--NSPLGRIFATALRNANNSR-----------EIMKESIEEAGRAVTHDL 103
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCV 188
L+ LG+++S L+G+LG V+GM+ F + G +N GI +L + GL V
Sbjct: 104 DRFLTSLGTIASMAPLLGLLGTVIGMIEIFGAQTGGAANPGQLAHGISIALYNTAFGLIV 163
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
+IP+ I Y F + + ME A + I+
Sbjct: 164 AIPAMIFYRYFRSRVESLVVDMEQQAIKLVEIVH 197
>gi|119505773|ref|ZP_01627841.1| MotA/TolQ/ExbB proton channel [marine gamma proteobacterium
HTCC2080]
gi|119458407|gb|EAW39514.1| MotA/TolQ/ExbB proton channel [marine gamma proteobacterium
HTCC2080]
Length = 207
Score = 118 bits (297), Expect = 5e-25, Method: Composition-based stats.
Identities = 44/215 (20%), Positives = 87/215 (40%), Gaps = 22/215 (10%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS---GQSL 69
+F L G ++ ++ + S+++ + I++SV R W L
Sbjct: 1 MFDLLAAGGW----VMPVIVLCSVIALGISIERSVALNPDRIAPPHLLANVWKQLKAGEL 56
Query: 70 ETVCKSLKN-HHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ + LK H L AI + ++ + D + + A + ++
Sbjct: 57 D--AQRLKALRHRSPLGAILAAGLANRSQGR-----------DVMKESIQEAAGHVVHDL 103
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
L+ LG++++ L+G+LG V+GM+ F I + N GI E+LI+ GL
Sbjct: 104 ERYLNTLGTVAAVAPLLGLLGTVVGMIRVFTEITVQGTGNANALAGGISEALITTAAGLV 163
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
V+IP+ + + F + +E + + L
Sbjct: 164 VAIPALVMHRYFTGKIDTIVVGLEQVSIKLVDALH 198
>gi|325295281|ref|YP_004281795.1| MotA/TolQ/ExbB proton channel [Desulfurobacterium
thermolithotrophum DSM 11699]
gi|325065729|gb|ADY73736.1| MotA/TolQ/ExbB proton channel [Desulfurobacterium
thermolithotrophum DSM 11699]
Length = 206
Score = 118 bits (297), Expect = 6e-25, Method: Composition-based stats.
Identities = 45/208 (21%), Positives = 88/208 (42%), Gaps = 21/208 (10%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLR---RQFREFEQLFWSGQ 67
+S+ L + G+ L S++S ++II+K + + ++ F S
Sbjct: 1 MSVLELLQKSGIIG----YFLLFLSVISVAIIIEKFIVLRLSKLVPKEDLRLIVDFLSEG 56
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
++ + K + L +I + A+ K ++ +V R+ E
Sbjct: 57 NIGDAVEFCKKRKSF-LTSIVLDALKNIGK----------PTKENFLNAFEVTAKRKFME 105
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYS---NNVVSIPGIIESLISILL 184
I + L ++++ L+G++G VLGM+ F + + N GI E+L++ +
Sbjct: 106 IERGMPLLATIAAVSPLLGLVGTVLGMIKIFGVLTAGSTAIGNPQELSAGIAEALLTTVF 165
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEG 212
GL V+IP+ YN F K A ++E
Sbjct: 166 GLLVAIPALFMYNLFQRKLDKIAAEVES 193
>gi|254786466|ref|YP_003073895.1| MotA/TolQ/ExbB proton channel [Teredinibacter turnerae T7901]
gi|237685694|gb|ACR12958.1| MotA/TolQ/ExbB proton channel [Teredinibacter turnerae T7901]
Length = 208
Score = 118 bits (297), Expect = 6e-25, Method: Composition-based stats.
Identities = 43/220 (19%), Positives = 90/220 (40%), Gaps = 18/220 (8%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
+ ++ G+ + + + SI ++ I++ + + R W+ +
Sbjct: 1 MLEIYSAGGIL----MYPILLCSIAVVAISIERFWTLNSQKIAPRHQLGEVWNWLQKNQL 56
Query: 73 -CKSLKN-HHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
+ LK + L I + +S + D + + A + + ++
Sbjct: 57 DAEKLKQLRQSSKLGRILAAGLSNSRHGR-----------DVMKDSIQEAANQVIHDMER 105
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVS 189
L LG++++ L+G+LG V+GM+ F ++ + N GI E+LI+ GLCV+
Sbjct: 106 YLGALGTIAAIAPLLGLLGTVIGMINVFTALNLEGTGNAGALAGGISEALITTAAGLCVA 165
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNI 229
IP+ IA+ F+ + ME A + L ++
Sbjct: 166 IPAMIAHRFFVRRVDTLVVTMEQEAVKLVDALHNDRRVDV 205
>gi|311694957|gb|ADP97830.1| MotA/TolQ/ExbB proton channel family protein [marine bacterium
HP15]
Length = 208
Score = 118 bits (296), Expect = 6e-25, Method: Composition-based stats.
Identities = 43/218 (19%), Positives = 90/218 (41%), Gaps = 14/218 (6%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
+F L G+ + + SIL+ ++I+++ R + W
Sbjct: 1 MFELLKAGGIL----MVPIVACSILALAIILERFWTLRASRVAPPQTINELW-------- 48
Query: 73 CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKL 132
+ +K G + S + G + ++ + ++ ++ + ++ L
Sbjct: 49 -RWIKKKELNGRKLKALQGSSPLGRILAGGLLNAKHGREIMKESIEHEASQVIHDLERFL 107
Query: 133 SFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV-SIPGIIESLISILLGLCVSIP 191
+ LG++++ L+G+LG V+GM+ F I N GI E+LI+ GL V+IP
Sbjct: 108 NPLGTVATITPLLGLLGTVIGMIKVFAEIQLAGVGNAGNLAGGISEALITTAAGLSVAIP 167
Query: 192 SSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNI 229
+ I + FI + + ME A + ++ E ++
Sbjct: 168 ALICHRYFIRRVDELVVGMEQEAIKLVEVVHGDREIDV 205
>gi|149919461|ref|ZP_01907942.1| tonB system transport protein ExbB/TolQ [Plesiocystis pacifica
SIR-1]
gi|149819767|gb|EDM79192.1| tonB system transport protein ExbB/TolQ [Plesiocystis pacifica
SIR-1]
Length = 211
Score = 118 bits (296), Expect = 6e-25, Method: Composition-based stats.
Identities = 43/211 (20%), Positives = 78/211 (36%), Gaps = 15/211 (7%)
Query: 20 MGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV------- 72
M + K + L ++ S V I++ + F + S LE +
Sbjct: 1 MSILSKIVAISLVGMAVGSVYVTIERIFVLTRAFKSSATFAKK--SRPLLEELDLGKLEE 58
Query: 73 CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKL 132
K LA + ++ + + R + R ++ + E + +
Sbjct: 59 LAKGKEFEKAPLAKLTRMGLAAYNRHEGAEER-----LEFARRDLERRLDEVGSEARKGM 113
Query: 133 SFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCVSIP 191
L S+ S +G+ G V+G++ F IA + ++ GI E+LI +GL V+I
Sbjct: 114 GLLASVGSTAPFIGLFGTVIGIIVAFTGIAAAGGGGIEAVSAGIAEALIVTAIGLAVAIT 173
Query: 192 SSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
S + +N K M M+ A E L
Sbjct: 174 SVLIFNYLSARFDKLDMAMQHAAGELLDHLE 204
>gi|313206421|ref|YP_004045598.1| outer membrane transport energization protein exbb [Riemerella
anatipestifer DSM 15868]
gi|312445737|gb|ADQ82092.1| outer membrane transport energization protein ExbB [Riemerella
anatipestifer DSM 15868]
gi|325336135|gb|ADZ12409.1| ExbD5 [Riemerella anatipestifer RA-GD]
Length = 226
Score = 118 bits (296), Expect = 6e-25, Method: Composition-based stats.
Identities = 41/220 (18%), Positives = 84/220 (38%), Gaps = 17/220 (7%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE---QLFWSGQ 67
S++ + G+ I+ +F+ IL+ + +++ + F + F
Sbjct: 19 FSLWEILFGGGIISNVIMIAIFLLGILALYIFLERYFFIRRAAKTDPNFLNNIKDFVYEG 78
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
++T L N A + +S + I M E+ +
Sbjct: 79 KIDTAID-LCKTSNTPEARMIEKGLSRIGRPISD-----------ISNAMQSQGNLEVSK 126
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSN--NVVSIPGIIESLISILLG 185
+ + L+ L S S A ++G LG V+GM+ F I+ + GI ++ + G
Sbjct: 127 LEKNLNLLASASGAAPMLGFLGTVIGMIMAFFEISNVTGAVSPKLLASGIYTAMATTAAG 186
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
L V IP+ YN + + ++++ A EF +++
Sbjct: 187 LFVGIPAYFFYNILVTKVDRLVLKIQIHAGEFLDAINKPL 226
>gi|153809132|ref|ZP_01961800.1| hypothetical protein BACCAC_03442 [Bacteroides caccae ATCC 43185]
gi|149128465|gb|EDM19684.1| hypothetical protein BACCAC_03442 [Bacteroides caccae ATCC 43185]
Length = 239
Score = 118 bits (296), Expect = 6e-25, Method: Composition-based stats.
Identities = 37/225 (16%), Positives = 93/225 (41%), Gaps = 22/225 (9%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFW--- 64
++++ + ++ G I+ +L + S++ + ++ +++ ++ F +
Sbjct: 30 APEMNMLDMAIKGGW----IMIVLGVLSVVCFYILFERNYMIRKAGKEDPMFMERIKDYI 85
Query: 65 SGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARE 124
++ + N A + +S + + + ++ E
Sbjct: 86 HSGEIKAAINYCRTM-NTPSARMIEKGISRLGRPIND-----------VQAAIENVGNIE 133
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV---VSIPGIIESLIS 181
+ ++ + L+ + ++S ++G LG V GM+ F +A S N+ + GI E++I+
Sbjct: 134 VAKLEKGLTVMATISGGAPMLGFLGTVTGMVRAFYEMANAGSGNIDITLLSGGIYEAMIT 193
Query: 182 ILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+ GL V I + AYN + + +ME EF +L+ +
Sbjct: 194 TVGGLIVGIIAMFAYNYLVMLVDRVVNKMESRTMEFMDLLNEPAQ 238
>gi|82702158|ref|YP_411724.1| MotA/TolQ/ExbB proton channel [Nitrosospira multiformis ATCC 25196]
gi|82410223|gb|ABB74332.1| MotA/TolQ/ExbB proton channel [Nitrosospira multiformis ATCC 25196]
Length = 203
Score = 118 bits (296), Expect = 6e-25, Method: Composition-based stats.
Identities = 43/220 (19%), Positives = 86/220 (39%), Gaps = 22/220 (10%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFI----TLRRQFREFEQLFWSGQS 68
+FAL G I + + SI++ ++I ++ R + +
Sbjct: 1 MFALIQAAGWP----IWPIILASIVAVAIIGERIWALRLNVVAPRNLLPLVVREYREAGV 56
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ L+ H L IF + + + ++ + ++ A ++
Sbjct: 57 SSEMLTRLQKH--SPLGQIFSAGLK-----------NDTSTREVMKESIEEAGRAVAHQL 103
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQS-IAGYYSNNVVSIPGIIESLISILLGLC 187
L+ LG++ S L+G+LG ++GM+ F S +N GI +L + G+
Sbjct: 104 ERYLTTLGTIGSISPLMGLLGTLVGMIEIFGSNTPVSGNNPAQLAHGISVALYNAAFGIL 163
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEG 227
V+IPS + Y F + ++ME A + I+ +G
Sbjct: 164 VAIPSIMFYRYFRAKVDELVVEMELQALKLVEIIHGDRKG 203
>gi|260494268|ref|ZP_05814399.1| tonB-system energizer ExbB [Fusobacterium sp. 3_1_33]
gi|260198414|gb|EEW95930.1| tonB-system energizer ExbB [Fusobacterium sp. 3_1_33]
Length = 202
Score = 118 bits (296), Expect = 7e-25, Method: Composition-based stats.
Identities = 43/202 (21%), Positives = 91/202 (45%), Gaps = 15/202 (7%)
Query: 27 IITLLFIFSILSWSVIIQKSVNFITLRRQ----FREFEQLFWSGQSLETVCKSLKNHHNI 82
I+ +L I SI +++V++++ V F + FR+ + + ++ +
Sbjct: 11 ILWILVIISIGAFAVVLERIVFFARNEKNVGSNFRDEILSLVANKKIDEAIALCDTKESC 70
Query: 83 GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAG 142
SA+ ++ + +G I +QD + ++ +E +L+ L S+ S
Sbjct: 71 -----VASAVKKFLQKAPRG----IDVQDY-EFILKEITIKETSPYESRLNLLASVISIS 120
Query: 143 LLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISILLGLCVSIPSSIAYNKFIE 201
++G+LG V GM+ F +I+ Y + + + GI E+L++ GL ++IP + YN
Sbjct: 121 PMLGLLGTVTGMIRAFTNISKYGTGDAAIVADGIAEALLTTAAGLMIAIPVIVVYNYLNR 180
Query: 202 DSKKFAMQMEGFANEFSAILSR 223
+K +++ I R
Sbjct: 181 RLEKMENEIDDVVTNIINIFRR 202
>gi|126667251|ref|ZP_01738224.1| Biopolymer transport protein [Marinobacter sp. ELB17]
gi|126628196|gb|EAZ98820.1| Biopolymer transport protein [Marinobacter sp. ELB17]
Length = 208
Score = 118 bits (296), Expect = 7e-25, Method: Composition-based stats.
Identities = 45/218 (20%), Positives = 92/218 (42%), Gaps = 14/218 (6%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
+F L G+ + + S+L+ ++I+++ + R E W
Sbjct: 1 MFELLKAGGIL----MMPILFCSVLALAIILERFWSLRDSRIAPPEVLNELW-------- 48
Query: 73 CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKL 132
+ +K G + A S + G + ++ + ++ ++ + ++ L
Sbjct: 49 -RWIKKKELNGKRLKTLQASSPMGRVLASGLLNAKHGREVMKESIEHEASQVVHQLERFL 107
Query: 133 SFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV-SIPGIIESLISILLGLCVSIP 191
+ LG++++ L+G+LG V+GM+ F I N GI E+LI+ GL V+IP
Sbjct: 108 NPLGTVATITPLLGLLGTVIGMIKVFAEIQLAGVGNAGNLAGGISEALITTASGLSVAIP 167
Query: 192 SSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNI 229
+ IA+ FI + ME A + ++ E ++
Sbjct: 168 ALIAHRYFIRRVDALVINMEQEAIKLVEVVHGDREIDV 205
>gi|119478441|ref|ZP_01618426.1| MotA/TolQ/ExbB proton channel family protein [marine gamma
proteobacterium HTCC2143]
gi|119448527|gb|EAW29774.1| MotA/TolQ/ExbB proton channel family protein [marine gamma
proteobacterium HTCC2143]
Length = 208
Score = 118 bits (296), Expect = 7e-25, Method: Composition-based stats.
Identities = 47/221 (21%), Positives = 90/221 (40%), Gaps = 24/221 (10%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFW----SGQS 68
+F L G + + + SI ++ I++ + + E W + Q
Sbjct: 1 MFELVKSGGWL----MLPIILCSIAVVAICIERFLALNPKKISPPETLGEVWGWIKNSQL 56
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
K+LKN + L I + +S + D + + A + + ++
Sbjct: 57 DAEKLKTLKN--SSPLGRILAAGLSNSRHGR-----------DVMKESIQEAASHVIHDL 103
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
L+ LG++++ L+G+LG V+GM+ F +I + N V GI E+LI+ GL
Sbjct: 104 ERYLNTLGTIAAISPLLGLLGTVIGMIKVFTAIMLQGTGNAGVLAGGISEALITTATGLT 163
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS--RQTE 226
V+IP+ I + + + +E + L RQ +
Sbjct: 164 VAIPALIMHRFYSRRIDSVVITLEQETIKLVDALHGDRQVD 204
>gi|315023638|gb|EFT36642.1| MotA/TolQ/ExbB family biopolymer transport prote in [Riemerella
anatipestifer RA-YM]
Length = 220
Score = 118 bits (296), Expect = 7e-25, Method: Composition-based stats.
Identities = 41/220 (18%), Positives = 84/220 (38%), Gaps = 17/220 (7%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE---QLFWSGQ 67
S++ + G+ I+ +F+ IL+ + +++ + F + F
Sbjct: 13 FSLWEILFGGGIISNVIMIAIFLLGILALYIFLERYFFIRRAAKTDPNFLNNIKDFVYEG 72
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
++T L N A + +S + I M E+ +
Sbjct: 73 KIDTAID-LCKTSNTPEARMIEKGLSRIGRPISD-----------ISNAMQSQGNLEVSK 120
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSN--NVVSIPGIIESLISILLG 185
+ + L+ L S S A ++G LG V+GM+ F I+ + GI ++ + G
Sbjct: 121 LEKNLNLLASASGAAPMLGFLGTVIGMIMAFFEISNVTGAVSPKLLASGIYTAMATTAAG 180
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
L V IP+ YN + + ++++ A EF +++
Sbjct: 181 LFVGIPAYFFYNILVTKVDRLVLKIQIHAGEFLDAINKPL 220
>gi|297620361|ref|YP_003708498.1| putative protein TolQ [Waddlia chondrophila WSU 86-1044]
gi|297375662|gb|ADI37492.1| putative protein TolQ [Waddlia chondrophila WSU 86-1044]
Length = 249
Score = 118 bits (296), Expect = 7e-25, Method: Composition-based stats.
Identities = 49/226 (21%), Positives = 90/226 (39%), Gaps = 23/226 (10%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLET- 71
+ Q L K I + S++ W++++ K+ R+ F++ L
Sbjct: 15 FLQAYQQSDLLGKGIYLAIVAASVICWTLMLYKTWQIREARKNSLRFKKKV----DLRKG 70
Query: 72 --VCKSLKNHHNIGLAAIFMSAMSEWKKSC--------------DKGARSPIGIQDRIDR 115
+ + + L + KK + G+ D I+
Sbjct: 71 NLLAQEAEGERKERLPNPYYEIYVILKKHTVDLLRKNHHVMGQKEGGSYLSPTDIDCIEA 130
Query: 116 MMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA--GYYSNNVVSIP 173
+ AIA + +E+ L L ++ L+G+LG V G++ F + ++N + +
Sbjct: 131 NLATAIASQTKEMDRHLFILSTIVGLAPLMGLLGTVWGILISFSQLQSQAAAASNQMVLG 190
Query: 174 GIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
GI +L + +LGL +IP+ IAYN + F MEGF NE +
Sbjct: 191 GIALALTTTVLGLLTAIPALIAYNYLKSSIRDFETDMEGFTNEMLS 236
>gi|158521749|ref|YP_001529619.1| MotA/TolQ/ExbB proton channel [Desulfococcus oleovorans Hxd3]
gi|158510575|gb|ABW67542.1| MotA/TolQ/ExbB proton channel [Desulfococcus oleovorans Hxd3]
Length = 576
Score = 117 bits (295), Expect = 8e-25, Method: Composition-based stats.
Identities = 43/209 (20%), Positives = 89/209 (42%), Gaps = 19/209 (9%)
Query: 17 FMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFW---SGQSLETVC 73
+ G V I+ +L ++ ++II+++V F +G +
Sbjct: 375 IAKGGPIVWPILAIL----VMGLTIIIERAVYLWKRTCDAETFMAHVGRCIAGGQWDACR 430
Query: 74 KSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLS 133
+ + + + + +A++ + + ++ + AI E+ + LS
Sbjct: 431 LACEKNQKQSVPRVIGTAVAFGQMDR-----------ESMENALQEAILNEVPRLERFLS 479
Query: 134 FLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPS 192
LG +++ L+G+LG V GM+ F I Y + + + GI E+L++ +LGLCV+IP
Sbjct: 480 TLGLLAAIAPLLGLLGTVTGMIQTFHVITYYGTGDARMLSGGISEALVTTMLGLCVAIPL 539
Query: 193 SIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+ + + QME A F ++
Sbjct: 540 MLGHTLLTRKVETLIGQMEEKAVAFVNMI 568
>gi|333029291|ref|ZP_08457352.1| MotA/TolQ/ExbB proton channel [Bacteroides coprosuis DSM 18011]
gi|332739888|gb|EGJ70370.1| MotA/TolQ/ExbB proton channel [Bacteroides coprosuis DSM 18011]
Length = 237
Score = 117 bits (295), Expect = 8e-25, Method: Composition-based stats.
Identities = 36/221 (16%), Positives = 85/221 (38%), Gaps = 21/221 (9%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+++ + + G I+ +L I S++ + + ++ + +F L
Sbjct: 33 MNLLTMAAKGGW----IMIVLAILSLICFYIFFERIYVIRKASKDVPDFIDKI-KADILS 87
Query: 71 ---TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
N A + ++ + + + ++ E+ +
Sbjct: 88 GNIKGALEYCQSVNTPAARMIEKGINRLGRPVND-----------VQAAIENVGNLEVSK 136
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI--PGIIESLISILLG 185
+ + L+F+ +++ ++G LG V GM+ F +A +N +++ GI E++I+ + G
Sbjct: 137 LEKGLNFMATIAGGAPMIGFLGTVTGMVRAFYEMANAGNNVDITLLSGGIYEAMITTIGG 196
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
L V I + AYN + ME F +L+ +
Sbjct: 197 LVVGIIAMFAYNYLVSLIDGIVNNMESKTMAFMDLLNEPAK 237
>gi|167765302|ref|ZP_02437415.1| hypothetical protein BACSTE_03690 [Bacteroides stercoris ATCC
43183]
gi|167696930|gb|EDS13509.1| hypothetical protein BACSTE_03690 [Bacteroides stercoris ATCC
43183]
Length = 238
Score = 117 bits (295), Expect = 8e-25, Method: Composition-based stats.
Identities = 36/225 (16%), Positives = 96/225 (42%), Gaps = 21/225 (9%)
Query: 7 AIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS- 65
A +++++++ ++ G I+ +L + S++ + ++ +++ ++ F
Sbjct: 30 APDEMNLWSMAVKGGW----IMVVLGVLSVVCFYILFERNYVIRKAGKEDPMFMDKIKDY 85
Query: 66 --GQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAR 123
G ++ ++ + A + +S + + + ++
Sbjct: 86 ILGGEIKAAIAYCRS-VDTPSARMIEKGISRLGRPVND-----------VQAAIENVGNI 133
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI--PGIIESLIS 181
E+ ++ + L+ + ++S ++G LG V GM+ F +A +N +++ GI E++I+
Sbjct: 134 EVAKLEKGLTIMATISGGAPMIGFLGTVTGMVRAFFEMANAGNNIDITLLSGGIYEAMIT 193
Query: 182 ILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+ GL V I + AYN + +ME F +L+ +
Sbjct: 194 TVGGLIVGIIAMFAYNYLVTLVDGVVNKMEAKTMAFMDLLNEPAK 238
>gi|255690512|ref|ZP_05414187.1| MotA/TolQ/ExbB proton channel family protein [Bacteroides
finegoldii DSM 17565]
gi|260623964|gb|EEX46835.1| MotA/TolQ/ExbB proton channel family protein [Bacteroides
finegoldii DSM 17565]
Length = 239
Score = 117 bits (295), Expect = 9e-25, Method: Composition-based stats.
Identities = 37/227 (16%), Positives = 94/227 (41%), Gaps = 22/227 (9%)
Query: 6 LAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFW- 64
+ ++++ + ++ G I+ +L + S++ + ++ +++ ++ F +
Sbjct: 28 VGTPEMNMLDMAIKGGW----IMVVLGVLSVVCFYILFERNYMIRKAGKEDPMFMERIKD 83
Query: 65 --SGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIA 122
++ + N A + +S + + + ++
Sbjct: 84 YIHSGEIKAAINYCRTM-NTPSARMIEKGISRLGRPIND-----------VQVAIENVGN 131
Query: 123 RELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV---VSIPGIIESL 179
E+ ++ + L+ + ++S ++G LG V GM+ F +A S N+ + GI E++
Sbjct: 132 IEVAKLEKGLTVMATISGGAPMLGFLGTVTGMVRAFYEMANAGSGNIDITLLSGGIYEAM 191
Query: 180 ISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
I+ + GL V I + AYN + + +ME EF +L+ +
Sbjct: 192 ITTVGGLIVGIIAMFAYNYLVMLVDRVVNKMESRTMEFMDLLNEPAQ 238
>gi|218128537|ref|ZP_03457341.1| hypothetical protein BACEGG_00107 [Bacteroides eggerthii DSM 20697]
gi|317475647|ref|ZP_07934908.1| MotA/TolQ/ExbB proton channel family protein [Bacteroides eggerthii
1_2_48FAA]
gi|217989261|gb|EEC55575.1| hypothetical protein BACEGG_00107 [Bacteroides eggerthii DSM 20697]
gi|316908217|gb|EFV29910.1| MotA/TolQ/ExbB proton channel family protein [Bacteroides eggerthii
1_2_48FAA]
Length = 238
Score = 117 bits (295), Expect = 9e-25, Method: Composition-based stats.
Identities = 37/225 (16%), Positives = 96/225 (42%), Gaps = 21/225 (9%)
Query: 7 AIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS- 65
A +++++++ ++ G I+ +L + S++ + ++ +++ ++ F
Sbjct: 30 APDEMNLWSMAVKGGW----IMVVLGVLSVVCFYILFERNYVIRKAGKEDPMFMDKIKDY 85
Query: 66 --GQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAR 123
G ++ ++ N A + +S + + + ++
Sbjct: 86 ILGGEIKAAIAYCRS-VNTPSARMIEKGISRLGRP-----------MNDVQAAIENVGNI 133
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI--PGIIESLIS 181
E+ ++ + L+ + ++S ++G LG V GM+ F +A +N +++ GI E++I+
Sbjct: 134 EVAKLEKGLTIMATISGGAPMIGFLGTVTGMVRAFFEMANAGNNIDITLLSGGIYEAMIT 193
Query: 182 ILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+ GL V I + AYN + +ME F +L+ +
Sbjct: 194 TVGGLIVGIIAMFAYNYLVTLVDGVVNKMESKTMAFMDLLNEPAK 238
>gi|317060725|ref|ZP_07925210.1| LOW QUALITY PROTEIN: biopolymer transport exbB protein
[Fusobacterium sp. D12]
gi|313686401|gb|EFS23236.1| LOW QUALITY PROTEIN: biopolymer transport exbB protein
[Fusobacterium sp. D12]
Length = 215
Score = 117 bits (295), Expect = 9e-25, Method: Composition-based stats.
Identities = 44/204 (21%), Positives = 83/204 (40%), Gaps = 19/204 (9%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQ-----FREFEQLFWSGQSLETVCKSLKNHHNI 82
+ +F +L I++++V F+ + ++ + + + E + N +
Sbjct: 23 MWFIFALGVLGLYAILERTVYFMIREKNSIANLNKKLKDMLEKNKIKEAIVHLNSNKSSS 82
Query: 83 G--LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSS 140
L AI + E KKS + ++ ++L + + + +
Sbjct: 83 ARVLQAILIYGYKENKKSL-----------EALEEKGKEVAIQQLRHLERNMWLISVAAH 131
Query: 141 AGLLVGILGAVLGMMGFFQSIAGYYSNN-VVSIPGIIESLISILLGLCVSIPSSIAYNKF 199
LVG+LG V GM+ FQ++A Y + + V GI E+L + GL V+IP+ I YN +
Sbjct: 132 VAPLVGLLGTVTGMIKAFQAVALYGTGDPAVLAKGISEALYTTAGGLFVAIPAMILYNYY 191
Query: 200 IEDSKKFAMQMEGFANEFSAILSR 223
+ ME + E R
Sbjct: 192 NKKIDTIISDMEQSSTELLNYFRR 215
>gi|330752059|emb|CBL80570.1| MotA/TolQ/ExbB family biopolymer transport protein [uncultured
Flavobacteria bacterium]
gi|330752180|emb|CBL87139.1| MotA/TolQ/ExbB family biopolymer transport protein [uncultured
Flavobacteria bacterium]
Length = 232
Score = 117 bits (295), Expect = 1e-24, Method: Composition-based stats.
Identities = 38/219 (17%), Positives = 79/219 (36%), Gaps = 15/219 (6%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG--QS 68
++I L G+ I+ L I SI + + +++ + F
Sbjct: 25 MTILELMTSGGVGGILIMVTLGILSIFAVYIFLERFGAMRNANKVDPNFMNNIKDMVMDG 84
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+L + +A + +S K I + ++ E+ +
Sbjct: 85 KLDAAGALCKAESTPVARMIAKGISRIGKPLGD-----------ITQAIENQGKLEVTRL 133
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV--VSIPGIIESLISILLGL 186
+ L L ++S ++G LG V+GM+ F+ +A + GI ++ + + GL
Sbjct: 134 EKGLPMLATISGGAPMIGFLGTVIGMILTFKEMANAGGQIKLDMMAEGIYTAMTTTVAGL 193
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
V I + YN + + ++E A +F +L
Sbjct: 194 LVGIIAYFGYNFLVTRVDRVVYKLESSAMDFLDLLHEPA 232
>gi|237744147|ref|ZP_04574628.1| biopolymer transport exbB protein [Fusobacterium sp. 7_1]
gi|256027740|ref|ZP_05441574.1| biopolymer transport exbB protein [Fusobacterium sp. D11]
gi|289765697|ref|ZP_06525075.1| biopolymer transport exbB protein [Fusobacterium sp. D11]
gi|229431376|gb|EEO41588.1| biopolymer transport exbB protein [Fusobacterium sp. 7_1]
gi|289717252|gb|EFD81264.1| biopolymer transport exbB protein [Fusobacterium sp. D11]
Length = 202
Score = 117 bits (294), Expect = 1e-24, Method: Composition-based stats.
Identities = 43/202 (21%), Positives = 91/202 (45%), Gaps = 15/202 (7%)
Query: 27 IITLLFIFSILSWSVIIQKSVNFITLRRQ----FREFEQLFWSGQSLETVCKSLKNHHNI 82
I+ +L I SI +++V++++ V F + FR+ + + ++ +
Sbjct: 11 ILWVLVIISIGAFAVVLERIVFFARNEKNVGSNFRDEILSLVANKKIDEAIALCDTKKSC 70
Query: 83 GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAG 142
SA+ ++ + +G I +QD + ++ +E +L+ L S+ S
Sbjct: 71 -----VASAVKKFLQKAPRG----IDVQDY-EFILKEITIKETSPYESRLNLLASVISIS 120
Query: 143 LLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISILLGLCVSIPSSIAYNKFIE 201
++G+LG V GM+ F +I+ Y + + + GI E+L++ GL ++IP + YN
Sbjct: 121 PMLGLLGTVTGMIRAFTNISKYGTGDAAIVADGIAEALLTTAAGLMIAIPVIVVYNYLNR 180
Query: 202 DSKKFAMQMEGFANEFSAILSR 223
+K +++ I R
Sbjct: 181 RLEKMENEIDDVVTNIINIFRR 202
>gi|260222818|emb|CBA32766.1| hypothetical protein Csp_B15670 [Curvibacter putative symbiont of
Hydra magnipapillata]
Length = 208
Score = 117 bits (294), Expect = 1e-24, Method: Composition-based stats.
Identities = 50/216 (23%), Positives = 87/216 (40%), Gaps = 20/216 (9%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLR----RQFREFEQLFWSGQS 68
+F++ G I L SIL+ ++II++ ++ T + R E + +
Sbjct: 1 MFSIIQAAGWP----IWPLIACSILALAIIIERFISLKTAKVAPPRLLDEVLSVTKTSVP 56
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
V L+ N L + SA+ P +D + M+ A + +
Sbjct: 57 GPDVVSQLE--KNSALGEVLASALRAVN-------SDPHCSEDDLRATMEGAGRLVAQRL 107
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA---GYYSNNVVSIPGIIESLISILLG 185
L+ LG+++SA L+G+ G V+GM+ F S A N GI +L + G
Sbjct: 108 ENYLTALGTIASAAPLLGLFGTVVGMIEIFGSQAPGSTGGGNPAQLAHGISIALYNTAFG 167
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
L V+IPS I + F + + +E + L
Sbjct: 168 LVVAIPSLIFWRYFRGRVDAYLLTLELSSEHLVRHL 203
>gi|149920467|ref|ZP_01908935.1| MotA/TolQ/ExbB proton channel family protein [Plesiocystis pacifica
SIR-1]
gi|149818648|gb|EDM78093.1| MotA/TolQ/ExbB proton channel family protein [Plesiocystis pacifica
SIR-1]
Length = 221
Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats.
Identities = 44/219 (20%), Positives = 89/219 (40%), Gaps = 18/219 (8%)
Query: 11 ISIFALFMQMGLA-VKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS--GQ 67
+++ F+Q+ L ++ +L S+ S +++I++ + F ++ ++ +
Sbjct: 1 MNLQEAFLQLALLGANWVLWILVALSVGSVAIVIERLMFFSSISKKDAGLMKGVADKLAN 60
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
L + A + +A+ D+GA S + + +
Sbjct: 61 DDIEGTAKLVENQPSPGARMLGAALE----VADRGAPSAKAVLEGNRASEKL-------R 109
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP----GIIESLISIL 183
+ L FLG++ S +G+ G VL ++ F + GI E+L++
Sbjct: 110 LERNLGFLGTVGSNAPFIGLFGTVLEILRVFNKLGESGVTTGDEASEIMTGISEALVATA 169
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
+GL V+IP+ IAYN F K+ + +G A LS
Sbjct: 170 IGLLVAIPAVIAYNAFQRRVKRQLAEADGLTGMALAQLS 208
>gi|237719136|ref|ZP_04549617.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
gi|293368685|ref|ZP_06615291.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Bacteroides ovatus SD CMC 3f]
gi|229451515|gb|EEO57306.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
gi|292636226|gb|EFF54712.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Bacteroides ovatus SD CMC 3f]
Length = 238
Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats.
Identities = 37/225 (16%), Positives = 93/225 (41%), Gaps = 22/225 (9%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFW--- 64
++++ + ++ G I+ +L + S++ + ++ +++ ++ F +
Sbjct: 30 APEMNMLDMAIKGGW----IMIVLGVLSVVCFYILFERNYMIRKAGKEDPMFMERIKDYI 85
Query: 65 SGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARE 124
++ + N A + +S + + + ++ E
Sbjct: 86 HSGEIKAAINYCRTI-NTPSARMIEKGISRLGRPIND-----------VQVAIENVGNIE 133
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV---VSIPGIIESLIS 181
+ ++ + L+ + ++S ++G LG V GM+ F +A S N+ + GI E++I+
Sbjct: 134 VAKLEKGLTVMATISGGAPMLGFLGTVTGMVRAFYEMANAGSGNIDITLLSGGIYEAMIT 193
Query: 182 ILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+ GL V I + AYN + + +ME EF +L+ +
Sbjct: 194 TVGGLIVGIIAMFAYNYLVMLVDRVVNKMESRTMEFMDLLNEPAK 238
>gi|225154950|ref|ZP_03723447.1| MotA/TolQ/ExbB proton channel [Opitutaceae bacterium TAV2]
gi|224804309|gb|EEG22535.1| MotA/TolQ/ExbB proton channel [Opitutaceae bacterium TAV2]
Length = 622
Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats.
Identities = 55/243 (22%), Positives = 96/243 (39%), Gaps = 34/243 (13%)
Query: 5 GLAIMDISIFA------LFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFRE 58
G A+ +S+F +F G + ++ I+ WSV I K +++
Sbjct: 363 GEAMEHVSLFGDIANNMMFD--GWIAVFVCIIMI---IVGWSVAIAKFSYLNKIQKGSES 417
Query: 59 FEQLFWS--GQSLETV----CKSLKNHHNIGLAA------------IFMSAMSEWK-KSC 99
F + W L + +S+++ AA ++ E + +
Sbjct: 418 FIKQ-WKEVSSDLTALDHNNAESVQSLGGTASAATQKLIRQSPHYHVYQIGSEEIRHRLT 476
Query: 100 DKGARSPIGIQ--DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGF 157
KG + + + I +D + E + + L +L + G VG+LG V+G+M
Sbjct: 477 RKGGFAGLSARSIQAIKASLDSGLTHETDRLNRGLVYLTISIAGGPYVGLLGTVVGVMIT 536
Query: 158 FQSIAGYYSNNVVS-IPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANE 216
F IA V S PGI +L++ + GL V+IP+ Y+ K M F +E
Sbjct: 537 FAVIAKTGEVEVNSIAPGIASALLATVAGLLVAIPALFIYSYLNTRIKSLTSSMRTFIDE 596
Query: 217 FSA 219
F A
Sbjct: 597 FIA 599
>gi|298207908|ref|YP_003716087.1| putative biopolymer transport protein [Croceibacter atlanticus
HTCC2559]
gi|83850549|gb|EAP88417.1| putative biopolymer transport protein [Croceibacter atlanticus
HTCC2559]
Length = 228
Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats.
Identities = 45/220 (20%), Positives = 89/220 (40%), Gaps = 17/220 (7%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFW---SGQ 67
+S+ L G+A II +LF+ + + ++ + + F +G
Sbjct: 21 LSLLDLLFSGGMAGSIIIGVLFVLLFAAVYIYFERLFAIKAASKTDKNFMHQIRDNVAGG 80
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
++ K N +A + KG + I+ ++ A E+ +
Sbjct: 81 NI-EAAKIRCAQENSPVA-----------RLTAKGISRIGSPLEDINTAIENAGRLEVYK 128
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGY--YSNNVVSIPGIIESLISILLG 185
+ + +S L +++ A ++G LG V+GM+ F +A + GI ++ + + G
Sbjct: 129 LEKNVSVLATIAGAAPMIGFLGTVIGMVLAFHQLATSSGQAEMGNLAEGIYTAMTTTVAG 188
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
L V I + I YN + + K QME A +F +L+
Sbjct: 189 LIVGIIAYIGYNHLVVKTDKVVHQMEATAVDFLDLLNEPA 228
>gi|167571243|ref|ZP_02364117.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Burkholderia oklahomensis C6786]
Length = 132
Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats.
Identities = 30/112 (26%), Positives = 53/112 (47%), Gaps = 1/112 (0%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+R+ R + A+ + L S+ S VG+LG V G+ SIA +
Sbjct: 9 ERVLRALRHALRTSQRRLEFGQVLLASIGSTAPFVGLLGTVWGIYHALGSIAASGQAQIE 68
Query: 171 SIPG-IIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
++ G + E+LI GL V+IP+ +AYN ++ +++GFA + +
Sbjct: 69 NVAGPVGEALIMTAFGLVVAIPAVLAYNILGRLVRQLVEELDGFARDLHVFV 120
>gi|298480233|ref|ZP_06998431.1| MotA/TolQ/ExbB proton channel family protein [Bacteroides sp. D22]
gi|298273514|gb|EFI15077.1| MotA/TolQ/ExbB proton channel family protein [Bacteroides sp. D22]
Length = 239
Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats.
Identities = 37/224 (16%), Positives = 92/224 (41%), Gaps = 22/224 (9%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFW--- 64
++++ + ++ G I+ +L + S++ + ++ +++ ++ F +
Sbjct: 30 APEMNMLDMAIKGGW----IMIVLGVLSVVCFYILFERNYMIRKAGKEDPMFMERIKDYI 85
Query: 65 SGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARE 124
++ + N A + +S + + + ++ E
Sbjct: 86 HSGEIKAAINYCRTI-NTPSARMIEKGISRLGRPIND-----------VQVAIENVGNIE 133
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV---VSIPGIIESLIS 181
+ ++ + L+ + ++S ++G LG V GM+ F +A S N+ + GI E++I+
Sbjct: 134 VAKLEKGLTVMATISGGAPMLGFLGTVTGMVRAFYEMANAGSGNIDITLLSGGIYEAMIT 193
Query: 182 ILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+ GL V I + AYN + + +ME EF +L+
Sbjct: 194 TVGGLIVGIIAMFAYNYLVMLVDRVVNKMESRTMEFMDLLNEPA 237
>gi|192359531|ref|YP_001982256.1| MotA/TolQ/ExbB proton channel family domain-containing protein
[Cellvibrio japonicus Ueda107]
gi|190685696|gb|ACE83374.1| MotA/TolQ/ExbB proton channel family domain protein [Cellvibrio
japonicus Ueda107]
Length = 231
Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats.
Identities = 41/222 (18%), Positives = 86/222 (38%), Gaps = 18/222 (8%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS--GQS 68
+ + +F+ G + + + S++ V +++ + + WS +
Sbjct: 22 LQVIEIFLAGGFL----MWPILLCSLVVIGVSLERYWTLNPAKIAPKTLLAQVWSWIKNN 77
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
K + + L I + +S K + + + A + + ++
Sbjct: 78 QVDASKLRELKQSSPLGQILAAGLSNSKHGR-----------EVMKDSIQEAANQVIHDL 126
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
++ LG++++ L+G+LG V GM+ F +I S N V GI +L + GL
Sbjct: 127 ERYINILGTIANVVPLMGLLGTVFGMIEVFNAIMLQGSGNTGVLAGGISVALYTTAFGLL 186
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNI 229
V+IP+ IA+ F + ME A + L ++
Sbjct: 187 VAIPAMIAHRFFQRRIDSIVVTMEEEAIKLVDALHSDRRVDV 228
>gi|189463784|ref|ZP_03012569.1| hypothetical protein BACINT_00117 [Bacteroides intestinalis DSM
17393]
gi|189438734|gb|EDV07719.1| hypothetical protein BACINT_00117 [Bacteroides intestinalis DSM
17393]
Length = 238
Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats.
Identities = 37/223 (16%), Positives = 92/223 (41%), Gaps = 19/223 (8%)
Query: 7 AIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG 66
+++++++ ++ G I+ +L + SIL + ++ +++ ++ F
Sbjct: 30 GPEEMNLWSMAVKGGW----IMIVLGLLSILCFYILFERNYVIRKAGKEDPMFMDKIKDY 85
Query: 67 QSLETVCKSLK--NHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARE 124
+ ++ N A + +S + + + ++ E
Sbjct: 86 ILDGEIKAAIAYCRSVNTPAARMIEKGISRLGRPVND-----------VQAAIENVGNIE 134
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI--PGIIESLISI 182
+ ++ + L+ + ++S ++G LG V GM+ F +A +N +++ GI E++I+
Sbjct: 135 VAKLEKGLTIMATISGGAPMIGFLGTVTGMVRAFYEMANAGNNIDITLLSGGIYEAMITT 194
Query: 183 LLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+ GL V I + AYN + +ME F +L+
Sbjct: 195 VGGLIVGIIAMFAYNYLVTLVDGVVNKMEAKTMAFMDLLNEPA 237
>gi|86134191|ref|ZP_01052773.1| MotA/TolQ/ExbB proton channel family protein [Polaribacter sp.
MED152]
gi|85821054|gb|EAQ42201.1| MotA/TolQ/ExbB proton channel family protein [Polaribacter sp.
MED152]
Length = 229
Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats.
Identities = 49/220 (22%), Positives = 94/220 (42%), Gaps = 17/220 (7%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFW---SGQ 67
+SI+ L M GL + II +LF+ ++ + ++ + + F S
Sbjct: 22 LSIYKLIMDGGLGGQIIIAILFVLLAVALYIYFERIFAIKAASKVDKNFMNQIKDYVSNG 81
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
LE+ +L N N A + +S K + I+ ++ E+ E
Sbjct: 82 KLESA-NALCNSKNTPTARLISKGISRIGKPL-----------EDINTAIETTGKLEIYE 129
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA-GYYSNNVVSIP-GIIESLISILLG 185
+ + +S L +++ A ++G LG V+GM+ IA ++ + G+ ++ + + G
Sbjct: 130 LEKNVSVLATVAGAAPMIGFLGTVIGMIVAIHEIANAGGQIDIKMLSDGLYTAMTTTVAG 189
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
L V I + I YN + + K QME + EF +L+
Sbjct: 190 LIVGIIAYITYNHLVVRTNKVVYQMEAKSVEFLDLLNEPV 229
>gi|237653875|ref|YP_002890189.1| MotA/TolQ/ExbB proton channel [Thauera sp. MZ1T]
gi|237625122|gb|ACR01812.1| MotA/TolQ/ExbB proton channel [Thauera sp. MZ1T]
Length = 202
Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats.
Identities = 42/208 (20%), Positives = 88/208 (42%), Gaps = 12/208 (5%)
Query: 23 AVKCI---ITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNH 79
++ + I L + S+++ ++II++S+ R L+ V L+
Sbjct: 4 IIQAVGWPIWPLILASVIAVALIIERSITLRRSR---------IVPPGLLDKVLDDLRQI 54
Query: 80 HNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMS 139
A ++A S + G R+ ++ + ++ + ++ L+ LG+++
Sbjct: 55 GPSAEMAERVAAHSPLGRVLAAGLRNVHSPREVMKESIEETGRAVVHDLERFLTTLGTIA 114
Query: 140 SAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKF 199
S L+G+LG ++GM+ F S +N GI +L + LGL ++IP+ I + F
Sbjct: 115 SISPLMGLLGTIIGMIDIFASQGVSGANPAQLAQGISIALYTTGLGLIIAIPAMIFWRHF 174
Query: 200 IEDSKKFAMQMEGFANEFSAILSRQTEG 227
F + ME A + + +
Sbjct: 175 RALIDSFVIDMEQQAIKLVEVSHGERRA 202
>gi|291613833|ref|YP_003523990.1| MotA/TolQ/ExbB proton channel [Sideroxydans lithotrophicus ES-1]
gi|291583945|gb|ADE11603.1| MotA/TolQ/ExbB proton channel [Sideroxydans lithotrophicus ES-1]
Length = 201
Score = 116 bits (292), Expect = 2e-24, Method: Composition-based stats.
Identities = 47/219 (21%), Positives = 91/219 (41%), Gaps = 23/219 (10%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLR-----RQFREFEQLFWSGQ 67
+ L G I LL I S+++ ++I ++++ + + ++L G
Sbjct: 1 MITLIEAAGWP----IYLLLIASLVAVALITERALYLRSKKIVPPTLLDEVVQELKQRGV 56
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
SL+ + K L +F + + K +P +++ I+ A
Sbjct: 57 SLQMLAKL---SEGSPLGKVFAAGLKNIK-------SAPEVMKESIEEAGRSAAHD---- 102
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLC 187
+ L+ LG+++S L+G+ G V+GM+ F S + GI +L + GL
Sbjct: 103 LERFLTTLGTIASISPLLGLFGTVIGMIEIFGSQNAGGAAPTELAHGISVALYNTAYGLI 162
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
V++PS IAY F ++ME A + I+ + +
Sbjct: 163 VAVPSMIAYRHFRAQVDSLTIEMEQQAIKLVEIVHGERK 201
>gi|237749557|ref|ZP_04580037.1| biopolymer transporter ExbB [Oxalobacter formigenes OXCC13]
gi|229380919|gb|EEO31010.1| biopolymer transporter ExbB [Oxalobacter formigenes OXCC13]
Length = 204
Score = 116 bits (292), Expect = 2e-24, Method: Composition-based stats.
Identities = 37/217 (17%), Positives = 85/217 (39%), Gaps = 21/217 (9%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLR----RQFREFEQLFW 64
M+ +F++ G I L I S+++ ++II++ + + + + +
Sbjct: 1 MEAFVFSIIQAAGWP----IWFLLIASVIALALIIERLIYLRRRKILPPHLLDQVIREYR 56
Query: 65 SGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARE 124
G+ L+ +G G + +D + M+
Sbjct: 57 EGRVDAATIDKLEKGSPLGTV-------------LATGLQHSDVSRDNMKEAMEETGRSV 103
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILL 184
++ L+ +G++++ L+G+ G V+GM+ F S +N GI +L +
Sbjct: 104 ALQMERFLTTIGTIATLAPLMGLFGTVVGMIEIFGSQNAGGANPAELAHGISVALYNTGF 163
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
GL +++P+ + Y F F ++ME + ++
Sbjct: 164 GLLIAMPTLVFYRHFRALVDSFLIEMERQSARLVDVI 200
>gi|301166334|emb|CBW25910.1| putative biopolymer transport protein [Bacteriovorax marinus SJ]
Length = 197
Score = 116 bits (292), Expect = 2e-24, Method: Composition-based stats.
Identities = 47/211 (22%), Positives = 88/211 (41%), Gaps = 16/211 (7%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
+F LF G I+ L + S+L W V +K L++ +F GQ+L
Sbjct: 1 MFELFNAGGF----IMYPLLLCSLLVWFVTFEKIRFLNNLKKDIDL---MFIKGQAL--- 50
Query: 73 CKSLKNHHNIGLAAIFMSAMSE-WKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEK 131
K K H GL+ +S + + + R+ R + + +
Sbjct: 51 LKENKIHEAKGLSHSIHPLLSTPYLTLFESEELTREQWSMRLGRRL----IETQQGLKRS 106
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-VVSIPGIIESLISILLGLCVSI 190
L +G++ S+ +G+ G V+G++ FQSIA + V G+ E+LI+ G+ V++
Sbjct: 107 LWIIGTIGSSAPFIGLFGTVVGIIKSFQSIAASGKSGFAVVASGLSEALIATAAGIIVAV 166
Query: 191 PSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+ I YN F +++ + ++
Sbjct: 167 MAVILYNYFQNRLTSVNTEIKNRMQDLMDLI 197
>gi|34763646|ref|ZP_00144574.1| Biopolymer transport exbB protein [Fusobacterium nucleatum subsp.
vincentii ATCC 49256]
gi|237742306|ref|ZP_04572787.1| biopolymer transport exbB protein [Fusobacterium sp. 4_1_13]
gi|256845585|ref|ZP_05551043.1| tonB-system energizer ExbB [Fusobacterium sp. 3_1_36A2]
gi|27886655|gb|EAA23820.1| Biopolymer transport exbB protein [Fusobacterium nucleatum subsp.
vincentii ATCC 49256]
gi|229429954|gb|EEO40166.1| biopolymer transport exbB protein [Fusobacterium sp. 4_1_13]
gi|256719144|gb|EEU32699.1| tonB-system energizer ExbB [Fusobacterium sp. 3_1_36A2]
Length = 202
Score = 116 bits (292), Expect = 2e-24, Method: Composition-based stats.
Identities = 43/202 (21%), Positives = 91/202 (45%), Gaps = 15/202 (7%)
Query: 27 IITLLFIFSILSWSVIIQKSVNFITLRRQ----FREFEQLFWSGQSLETVCKSLKNHHNI 82
I+ +L I SI +++V++++ V F + F++ + + ++ +
Sbjct: 11 ILWVLVIISIGAFAVVLERIVFFARNEKNIGDTFKDEILSLVANKKIDEAIALCDTKKSC 70
Query: 83 GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAG 142
SA+ ++ + KG I +QD + ++ +E +L+ L S+ S
Sbjct: 71 -----VASAVKKFLQKAPKG----IDVQDY-EFILKEITIKETSPYESRLNLLASVISIS 120
Query: 143 LLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISILLGLCVSIPSSIAYNKFIE 201
++G+LG V GM+ F +I+ Y + + + GI E+L++ GL ++IP + YN
Sbjct: 121 PMLGLLGTVTGMIRAFTNISKYGAGDAAIVADGIAEALLTTAAGLMIAIPVIVIYNYLNR 180
Query: 202 DSKKFAMQMEGFANEFSAILSR 223
+K +++ I R
Sbjct: 181 RLEKMENEIDDVVTNIINIFRR 202
>gi|254468964|ref|ZP_05082370.1| MotA/TolQ/ExbB proton channel [beta proteobacterium KB13]
gi|207087774|gb|EDZ65057.1| MotA/TolQ/ExbB proton channel [beta proteobacterium KB13]
Length = 201
Score = 116 bits (292), Expect = 2e-24, Method: Composition-based stats.
Identities = 46/214 (21%), Positives = 90/214 (42%), Gaps = 21/214 (9%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITL----RRQFREFEQLFWSGQS 68
++ + G I L SIL+ ++II++ + + E + L
Sbjct: 1 MWNIIQGAGWP----IWPLIFASILALAIIIERLWALRSAIIAPKNLLNEVKTLIDQKGV 56
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ L+ H +G IF +A+ D + SP I++ I+ ++
Sbjct: 57 NKKSIDLLREHSYLG--EIFATAL-------DHISSSPGLIKESIEETGRAVFH----KL 103
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCV 188
+ LS LG++++ L+G+ G ++GM+ F S ++ V GI +L + G+ V
Sbjct: 104 EKYLSTLGTIATVAPLLGLFGTIIGMVELFSSFTSSGADVTVFARGISIALYNTAGGIVV 163
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
++P+ I Y F + ++ME A I+
Sbjct: 164 AVPAMIMYRFFKNKVESLIVEMEQQAITLVEIIH 197
>gi|262065975|ref|ZP_06025587.1| biopolymer transport ExbB protein [Fusobacterium periodonticum ATCC
33693]
gi|291380332|gb|EFE87850.1| biopolymer transport ExbB protein [Fusobacterium periodonticum ATCC
33693]
Length = 202
Score = 116 bits (292), Expect = 2e-24, Method: Composition-based stats.
Identities = 42/202 (20%), Positives = 91/202 (45%), Gaps = 15/202 (7%)
Query: 27 IITLLFIFSILSWSVIIQKSVNFITLRRQ----FREFEQLFWSGQSLETVCKSLKNHHNI 82
I+ +L I SI +++VI+++ F + F+E + + ++ + +
Sbjct: 11 ILWVLTIISIAAFAVILERIAFFSRNEKAIGDTFKEEILSLVANKKIDEAKNLCASKKSC 70
Query: 83 GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAG 142
+A+ ++ + +KG +QD + ++ +E +L+ L S+ S
Sbjct: 71 -----VAAAVKKFLEKAEKGME----VQDY-EFILKEITIQETSPYESRLNLLASIISIS 120
Query: 143 LLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISILLGLCVSIPSSIAYNKFIE 201
++G+LG V GM+ F +I+ Y + + + GI E+L++ GL ++IP + YN
Sbjct: 121 PMLGLLGTVTGMIKAFTNISKYGAGDAAIVADGIAEALLTTAAGLMIAIPVIVVYNYLNR 180
Query: 202 DSKKFAMQMEGFANEFSAILSR 223
+K +++ I R
Sbjct: 181 RLEKMENEIDDIVTNIINIFRR 202
>gi|34540437|ref|NP_904916.1| MotA/TolQ/ExbB proton channel family protein [Porphyromonas
gingivalis W83]
gi|188994536|ref|YP_001928788.1| probable biopolymer transport protein [Porphyromonas gingivalis
ATCC 33277]
gi|34396750|gb|AAQ65815.1| MotA/TolQ/ExbB proton channel family protein [Porphyromonas
gingivalis W83]
gi|188594216|dbj|BAG33191.1| probable biopolymer transport protein [Porphyromonas gingivalis
ATCC 33277]
Length = 204
Score = 116 bits (292), Expect = 2e-24, Method: Composition-based stats.
Identities = 43/215 (20%), Positives = 88/215 (40%), Gaps = 20/215 (9%)
Query: 20 MGLAVKC--IITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFW---SGQSLETVCK 74
M LA+K I+ +L S+L+ + ++K + R+ F + +E+ +
Sbjct: 1 MDLALKGGWIMIVLAALSLLAIYIFVRKVMEIRAAGREDNSFMERIKDYIHEGKIESAMR 60
Query: 75 SLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSF 134
L A + ++ + + I ++ E+ ++ + L
Sbjct: 61 -LCQDRATPSARMIAKGITRLGRP-----------MNDILVAVENTGNIEIGKLEKGLPI 108
Query: 135 LGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI---PGIIESLISILLGLCVSIP 191
+ ++++ ++G LG V GM+ F +A + V GI E+L++ + GL V I
Sbjct: 109 IATIAAGAPMIGFLGTVTGMVRAFFDMANAGNGGVDVALLSGGIYEALVTTVGGLVVGIV 168
Query: 192 SSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+ AYN + K +ME EF +L+ +
Sbjct: 169 TLFAYNYLVAQVDKVVNKMETKTLEFMDLLNEPIK 203
>gi|237714382|ref|ZP_04544863.1| conserved hypothetical protein [Bacteroides sp. D1]
gi|262408214|ref|ZP_06084761.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|294646283|ref|ZP_06723935.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Bacteroides ovatus SD CC 2a]
gi|294806770|ref|ZP_06765597.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Bacteroides xylanisolvens SD CC 1b]
gi|229445546|gb|EEO51337.1| conserved hypothetical protein [Bacteroides sp. D1]
gi|262353766|gb|EEZ02859.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|292638364|gb|EFF56730.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Bacteroides ovatus SD CC 2a]
gi|294446052|gb|EFG14692.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Bacteroides xylanisolvens SD CC 1b]
Length = 238
Score = 116 bits (292), Expect = 2e-24, Method: Composition-based stats.
Identities = 37/225 (16%), Positives = 93/225 (41%), Gaps = 22/225 (9%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFW--- 64
++++ + ++ G I+ +L + S++ + ++ +++ ++ F +
Sbjct: 30 APEMNMLDMAVKGGW----IMIVLGVLSVICFYILFERNYMIRKAGKEDPMFMERIKDYI 85
Query: 65 SGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARE 124
++ + N A + +S + + + ++ E
Sbjct: 86 HSGEIKAAINYCRTM-NTPSARMIEKGISRLGRPIND-----------VQVAIENVGNIE 133
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV---VSIPGIIESLIS 181
+ ++ + L+ + ++S ++G LG V GM+ F +A S N+ + GI E++I+
Sbjct: 134 VAKLEKGLTVMATISGGAPMLGFLGTVTGMVRAFYEMANAGSGNIDITLLSGGIYEAMIT 193
Query: 182 ILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+ GL V I + AYN + + +ME EF +L+ +
Sbjct: 194 TVGGLIVGIIAMFAYNYLVMLVDRVVNKMESRTMEFMDLLNEPAK 238
>gi|224535818|ref|ZP_03676357.1| hypothetical protein BACCELL_00682 [Bacteroides cellulosilyticus
DSM 14838]
gi|224522541|gb|EEF91646.1| hypothetical protein BACCELL_00682 [Bacteroides cellulosilyticus
DSM 14838]
Length = 237
Score = 116 bits (292), Expect = 2e-24, Method: Composition-based stats.
Identities = 37/223 (16%), Positives = 92/223 (41%), Gaps = 19/223 (8%)
Query: 7 AIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG 66
+++++++ ++ G I+ +L + SIL + ++ +++ ++ F
Sbjct: 30 GPEEMNLWSMAVKGGW----IMIVLGLLSILCFYILFERNYVIRKAGKEDPMFMDKIKDY 85
Query: 67 QSLETVCKSLK--NHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARE 124
+ ++ N A + +S + + + ++ E
Sbjct: 86 ILDGEIKAAIAYCRSVNTPAARMIEKGISRLGRPVND-----------VQAAIENVGNIE 134
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI--PGIIESLISI 182
+ ++ + L+ + ++S ++G LG V GM+ F +A +N +++ GI E++I+
Sbjct: 135 VAKLEKGLTIMATISGGAPMIGFLGTVTGMVRAFYEMANAGNNIDITLLSGGIYEAMITT 194
Query: 183 LLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+ GL V I + AYN + +ME F +L+
Sbjct: 195 VGGLIVGIIAMFAYNYLVTLVDGVVNKMEAKTMAFMDLLNEPA 237
>gi|253996019|ref|YP_003048083.1| MotA/TolQ/ExbB proton channel [Methylotenera mobilis JLW8]
gi|253982698|gb|ACT47556.1| MotA/TolQ/ExbB proton channel [Methylotenera mobilis JLW8]
Length = 201
Score = 116 bits (292), Expect = 2e-24, Method: Composition-based stats.
Identities = 42/218 (19%), Positives = 91/218 (41%), Gaps = 21/218 (9%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFI----TLRRQFREFEQLFWSGQS 68
++ + + G I L I S+++ ++I ++S + + E + G
Sbjct: 1 MWEIILAAGWP----IWPLVIASVIAVAIIGERSFALRENIVSPKNLLPELQAWLAKGGI 56
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ L+ H +G +F +A++ K S + ++ ++
Sbjct: 57 TKDTITRLEQHSMLG--RVFATALANAKNSR-----------EVTKESIEETARAVAHQM 103
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCV 188
+ LS LG++++ L+G+LG V+GM+ F + + GI +L + G+ V
Sbjct: 104 EKYLSTLGTIATVSPLLGLLGTVIGMVELFGAFTTQGHDVAQFARGISVALYNTAAGIVV 163
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
++P+ IAY F ++ME A + I+ + +
Sbjct: 164 AVPAMIAYRYFRTKVDALLIEMEQQAIKLVEIIHGERQ 201
>gi|237747406|ref|ZP_04577886.1| biopolymer transporter ExbB [Oxalobacter formigenes HOxBLS]
gi|229378757|gb|EEO28848.1| biopolymer transporter ExbB [Oxalobacter formigenes HOxBLS]
Length = 202
Score = 116 bits (292), Expect = 2e-24, Method: Composition-based stats.
Identities = 39/209 (18%), Positives = 80/209 (38%), Gaps = 13/209 (6%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
+F + G I LL I S+++ ++II++ R LE
Sbjct: 1 MFYIIQAAGWP----IWLLLIASVIALALIIERLWYLRRSR---------ILPAGLLEQT 47
Query: 73 CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKL 132
+ + ++ S G + +D + M+ ++ L
Sbjct: 48 IRDYREGRIDNKTIAWLEGNSPLGAVLATGLQHSDVSRDNMREAMEETGRSVALQMERFL 107
Query: 133 SFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPS 192
+ +G++++ L+G+ G V+GM+ F S + +N GI +L + GL +++P+
Sbjct: 108 TTIGTIATLAPLMGLFGTVVGMIEIFGSQSATGTNPAQLAHGISVALYNTGFGLLIAMPT 167
Query: 193 SIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
I Y F F ++ME + +
Sbjct: 168 LIFYRHFRALVTSFLIEMERQSARLVDAI 196
>gi|257463129|ref|ZP_05627530.1| biopolymer transport exbB protein [Fusobacterium sp. D12]
Length = 203
Score = 116 bits (292), Expect = 2e-24, Method: Composition-based stats.
Identities = 44/204 (21%), Positives = 83/204 (40%), Gaps = 19/204 (9%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQ-----FREFEQLFWSGQSLETVCKSLKNHHNI 82
+ +F +L I++++V F+ + ++ + + + E + N +
Sbjct: 11 MWFIFALGVLGLYAILERTVYFMIREKNSIANLNKKLKDMLEKNKIKEAIVHLNSNKSSS 70
Query: 83 G--LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSS 140
L AI + E KKS + ++ ++L + + + +
Sbjct: 71 ARVLQAILIYGYKENKKSL-----------EALEEKGKEVAIQQLRHLERNMWLISVAAH 119
Query: 141 AGLLVGILGAVLGMMGFFQSIAGYYSNN-VVSIPGIIESLISILLGLCVSIPSSIAYNKF 199
LVG+LG V GM+ FQ++A Y + + V GI E+L + GL V+IP+ I YN +
Sbjct: 120 VAPLVGLLGTVTGMIKAFQAVALYGTGDPAVLAKGISEALYTTAGGLFVAIPAMILYNYY 179
Query: 200 IEDSKKFAMQMEGFANEFSAILSR 223
+ ME + E R
Sbjct: 180 NKKIDTIISDMEQSSTELLNYFRR 203
>gi|294785126|ref|ZP_06750414.1| biopolymer transport ExbB protein [Fusobacterium sp. 3_1_27]
gi|294486840|gb|EFG34202.1| biopolymer transport ExbB protein [Fusobacterium sp. 3_1_27]
Length = 202
Score = 116 bits (292), Expect = 2e-24, Method: Composition-based stats.
Identities = 42/202 (20%), Positives = 91/202 (45%), Gaps = 15/202 (7%)
Query: 27 IITLLFIFSILSWSVIIQKSVNFITLRRQ----FREFEQLFWSGQSLETVCKSLKNHHNI 82
I+ +L + SI +++V++++ V F + F++ + + ++ +
Sbjct: 11 ILWVLVVISIGAFAVVLERIVFFARNEKNIGDTFKDEILSLVANKKIDEAIALCDTKKSC 70
Query: 83 GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAG 142
SA+ ++ + KG I +QD + ++ +E +L+ L S+ S
Sbjct: 71 -----VASAVKKFLQKAPKG----IDVQDY-EFILKEITIKETSPYESRLNLLASVISIS 120
Query: 143 LLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISILLGLCVSIPSSIAYNKFIE 201
++G+LG V GM+ F +I+ Y + + + GI E+L++ GL ++IP + YN
Sbjct: 121 PMLGLLGTVTGMIRAFTNISKYGAGDAAIVADGIAEALLTTAAGLMIAIPVIVIYNYLNR 180
Query: 202 DSKKFAMQMEGFANEFSAILSR 223
+K +++ I R
Sbjct: 181 RLEKMENEIDDVVTNIINIFRR 202
>gi|332299678|ref|YP_004441599.1| MotA/TolQ/ExbB proton channel [Porphyromonas asaccharolytica DSM
20707]
gi|332176741|gb|AEE12431.1| MotA/TolQ/ExbB proton channel [Porphyromonas asaccharolytica DSM
20707]
Length = 224
Score = 116 bits (292), Expect = 2e-24, Method: Composition-based stats.
Identities = 38/215 (17%), Positives = 86/215 (40%), Gaps = 15/215 (6%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+S++ L G I+ +L + S+++ V + K + + R F +
Sbjct: 22 MSLWELACAGGW----IMIVLLLLSLVAIYVFVAKYIELRKVNRPDDSF---------IA 68
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
+ L+ A+ + +KG + + ++ + E+ +
Sbjct: 69 RIKDYLQMGRKDSAIALCKEKNTPEAHMIEKGLKRLGQPVSEVLPAIENVGSYEVGRLER 128
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI--PGIIESLISILLGLCV 188
L L ++++ ++G LG V GM+ F +A VS+ GI ++L++ + GL V
Sbjct: 129 GLPLLATIAAGAPMIGFLGTVTGMVQAFFDLANAPGGIDVSLLSSGIYQALVTTVGGLIV 188
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
I + YN + + ++E +F +++
Sbjct: 189 GIVTLFLYNYLVGQINRIVNRLEANTLDFMDVINE 223
>gi|149378072|ref|ZP_01895794.1| Biopolymer transport protein [Marinobacter algicola DG893]
gi|149357641|gb|EDM46141.1| Biopolymer transport protein [Marinobacter algicola DG893]
Length = 208
Score = 116 bits (292), Expect = 2e-24, Method: Composition-based stats.
Identities = 43/218 (19%), Positives = 90/218 (41%), Gaps = 14/218 (6%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
+F L G+ + + SIL+ ++I+++ R + W
Sbjct: 1 MFELLKAGGIL----MVPILACSILALAIILERFWTLRPSRVTPQHTINELW-------- 48
Query: 73 CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKL 132
+ +K G + S + G + ++ + ++ ++ + E+ L
Sbjct: 49 -RWIKKKELNGRKLKALQGSSPLGRILAGGLMNAKHGREIMKESIEHEASQVIHELERFL 107
Query: 133 SFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV-SIPGIIESLISILLGLCVSIP 191
+ LG++++ L+G+LG V+GM+ F I + GI E+LI+ GL V+IP
Sbjct: 108 NPLGTVATITPLLGLLGTVIGMIKVFAEIQLAGVGDAGNLAGGISEALITTASGLSVAIP 167
Query: 192 SSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNI 229
+ I + FI + + ME A + ++ E ++
Sbjct: 168 ALICHRYFIRRVDELVVGMEQEAIKLVEVVHGDREIDV 205
>gi|104781908|ref|YP_608406.1| solvent/drug/ferric siderophore transport protein ExbB [Pseudomonas
entomophila L48]
gi|95110895|emb|CAK15611.1| putative solvent/drug/ferric siderophore transport protein ExbB
[Pseudomonas entomophila L48]
Length = 601
Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats.
Identities = 52/208 (25%), Positives = 93/208 (44%), Gaps = 8/208 (3%)
Query: 24 VKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS-GQSLETVCKSLKNHHN- 81
II +L + + SW ++++K + +F + F + G LE H
Sbjct: 369 AWVIIAVLVLMMVQSWVIMLRKQRALSRVTAANAQFREHFATVGTRLEQFADDQGLHQRL 428
Query: 82 --IGLAAIFMSAMSEWKKSCDKGARS---PIGIQDRIDRMMDVAIARELEEITEKLSFLG 136
L +++ A+ E + +GA + + I MD RE + ++ KLS L
Sbjct: 429 QGSSLWRLYLVAVQELRTRRAQGADTTLVSAATIEAIRCSMDGVRTRENQVLSAKLSTLS 488
Query: 137 SMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIA 195
+ + G +G+LG VLG+M F A N+ PG+ +L++ +GL V+IP+
Sbjct: 489 NAIAGGPYIGLLGTVLGIMVVFLGTAMAGDVNINAIAPGMAAALLATAMGLFVAIPALFG 548
Query: 196 YNKFIEDSKKFAMQMEGFANEFSAILSR 223
YN+ +++ M F +EF L+
Sbjct: 549 YNRLTTRNREVGADMRVFVDEFITRLAE 576
>gi|326795255|ref|YP_004313075.1| MotA/TolQ/ExbB proton channel [Marinomonas mediterranea MMB-1]
gi|326546019|gb|ADZ91239.1| MotA/TolQ/ExbB proton channel [Marinomonas mediterranea MMB-1]
Length = 204
Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats.
Identities = 41/206 (19%), Positives = 87/206 (42%), Gaps = 18/206 (8%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLR----RQFREFEQLFWSGQSLETVCKSLKNHHNIG 83
+ L SIL+ +++I++ R Q E + ++++ H G
Sbjct: 12 MWPLLGCSILTLAIVIERFWTLRRSRVVPKNQLSEVMARLREDRMSLEYIRNMQQH--TG 69
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
L++I + + K + + A + + E+ +S LG++++
Sbjct: 70 LSSILAAGLLSSKHGRRV-----------MKDSVQDAASHVIHELERFMSTLGTIAAISP 118
Query: 144 LVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIED 202
L+G+LG V+GM+ F + + N + GI E+L++ GL ++IP+ I + F
Sbjct: 119 LLGLLGTVVGMIKVFSVLMEEGAGNTSLLAGGISEALLTTAAGLGIAIPAIIFHRFFSRK 178
Query: 203 SKKFAMQMEGFANEFSAILSRQTEGN 228
+ + ME +++ L + N
Sbjct: 179 IDELVVSMEQQSSKLIDALQGDRDSN 204
>gi|160883175|ref|ZP_02064178.1| hypothetical protein BACOVA_01144 [Bacteroides ovatus ATCC 8483]
gi|260171936|ref|ZP_05758348.1| putative biopolymer transport protein [Bacteroides sp. D2]
gi|299148208|ref|ZP_07041270.1| MotA/TolQ/ExbB proton channel family protein [Bacteroides sp.
3_1_23]
gi|315920248|ref|ZP_07916488.1| conserved hypothetical protein [Bacteroides sp. D2]
gi|156111400|gb|EDO13145.1| hypothetical protein BACOVA_01144 [Bacteroides ovatus ATCC 8483]
gi|298512969|gb|EFI36856.1| MotA/TolQ/ExbB proton channel family protein [Bacteroides sp.
3_1_23]
gi|313694123|gb|EFS30958.1| conserved hypothetical protein [Bacteroides sp. D2]
Length = 238
Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats.
Identities = 37/225 (16%), Positives = 93/225 (41%), Gaps = 22/225 (9%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFW--- 64
++++ + ++ G I+ +L + S++ + ++ +++ ++ F +
Sbjct: 30 APEMNMLDMAVKGGW----IMIVLGVLSVICFYILFERNYMIRKAGKEDPMFMERIKDYI 85
Query: 65 SGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARE 124
++ + N A + +S + + + ++ E
Sbjct: 86 HSGEIKAAINYCRTM-NTPSARMIEKGISRLGRPIND-----------VQVAIENVGNIE 133
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV---VSIPGIIESLIS 181
+ ++ + L+ + ++S ++G LG V GM+ F +A S N+ + GI E++I+
Sbjct: 134 VAKLEKGLTVMATISGGAPMLGFLGTVTGMVRAFYEMANAGSGNIDITLLSGGIYEAMIT 193
Query: 182 ILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+ GL V I + AYN + + +ME EF +L+ +
Sbjct: 194 TVGGLIVGIIAMFAYNYLVMLVDRVVNKMESRTMEFMDLLNEPAK 238
>gi|95931355|ref|ZP_01314068.1| MotA/TolQ/ExbB proton channel [Desulfuromonas acetoxidans DSM 684]
gi|95132598|gb|EAT14284.1| MotA/TolQ/ExbB proton channel [Desulfuromonas acetoxidans DSM 684]
Length = 480
Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats.
Identities = 41/208 (19%), Positives = 82/208 (39%), Gaps = 19/208 (9%)
Query: 18 MQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFW---SGQSLETVCK 74
Q G V LL ++ +I ++S R + F
Sbjct: 277 SQGGFIVWP--ILLIGA--VAVVLIGERSWFLRRNRFDGKVFLGRLEPLIEQGKWHDCET 332
Query: 75 SLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSF 134
+ + H + L + + + ++ ++ + AI E+ + LS
Sbjct: 333 ACQEHDDKPLPRVLRAGL-----------PYRDLNREDLENSLQEAILGEIPRLERFLST 381
Query: 135 LGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSS 193
L ++S L+G+LG V GM+ FQ I + + + + GI E+L++ +LGL V+IP
Sbjct: 382 LAVLASIAPLLGLLGTVTGMINTFQVITFHGTGDPRLMSSGISEALVTTMLGLAVAIPIM 441
Query: 194 IAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+ ++ + ++E A F ++
Sbjct: 442 LCHSLLSRRVEMVIGELEERAIRFVNVI 469
>gi|169633365|ref|YP_001707101.1| putative biopolymer transport protein (EXBB-like) [Acinetobacter
baumannii SDF]
gi|169152157|emb|CAP01059.1| putative biopolymer transport protein (EXBB-like) [Acinetobacter
baumannii]
Length = 211
Score = 116 bits (291), Expect = 3e-24, Method: Composition-based stats.
Identities = 46/213 (21%), Positives = 98/213 (46%), Gaps = 21/213 (9%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
++ L G + L + SIL+ ++ I++ V + + + V
Sbjct: 1 MWELVKAGGWL----MLPLILCSILTVAISIERFVRLRRSQVLPKVLMND--GSADISVV 54
Query: 73 CKSLKNHHNI---GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+L+ +N L I + E ++ ++ AR+ M+ ++E+ +
Sbjct: 55 ITNLEQDNNAQSTALGNILKAGF-EHQEHGEQFARAQ----------MEAMASQEISYLE 103
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA-GYYSNNVVSIPGIIESLISILLGLCV 188
+ ++FLG++S+ L+G+LG V+G++ F I G + + I GI ++LI+ +G+ +
Sbjct: 104 KNINFLGTLSAIAPLLGLLGTVVGIIESFLVIDFGLAGSPSLMISGISKALITTAVGMLI 163
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+IP+ I+Y F + + ++E F A L
Sbjct: 164 AIPALISYRYFQRVVQDYIAELEQQFTLFHASL 196
>gi|289207776|ref|YP_003459842.1| MotA/TolQ/ExbB proton channel [Thioalkalivibrio sp. K90mix]
gi|288943407|gb|ADC71106.1| MotA/TolQ/ExbB proton channel [Thioalkalivibrio sp. K90mix]
Length = 214
Score = 116 bits (291), Expect = 3e-24, Method: Composition-based stats.
Identities = 36/224 (16%), Positives = 87/224 (38%), Gaps = 24/224 (10%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFW-----SGQ 67
+ + G + + + S+L+ ++++++ R W G
Sbjct: 1 MLEIVQAGGWL----MLPILLCSVLAVAIVLERLWTLRRSRVVPPRLLSTIWEQMRMKGL 56
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+LE + + L A+ + ++ ++ ++ A R E
Sbjct: 57 TLEDIQRI---RAGSPLGAVLAAGLATHDRARQI-----------TQESIEEAGRRVAHE 102
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYY-SNNVVSIPGIIESLISILLGL 186
+ ++ LG+++ L+G+LG V+GM+ F I + GI ++LI+ G+
Sbjct: 103 LERYMNTLGTIAMITPLLGLLGTVVGMIEVFTVITEIGVGSPRDLAGGISQALITTAAGI 162
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
V+IP+ + F + ++ME A + ++ + + +
Sbjct: 163 GVAIPALAFHRYFRGRIDELVLEMEQEATKLVEVIHGERDATAA 206
>gi|116328204|ref|YP_797924.1| biopolymer transport protein, TolQ-like [Leptospira borgpetersenii
serovar Hardjo-bovis L550]
gi|116330928|ref|YP_800646.1| biopolymer transport protein, TolQ-like [Leptospira borgpetersenii
serovar Hardjo-bovis JB197]
gi|116120948|gb|ABJ78991.1| Biopolymer transport protein, TolQ-like [Leptospira borgpetersenii
serovar Hardjo-bovis L550]
gi|116124617|gb|ABJ75888.1| Biopolymer transport protein, TolQ-like [Leptospira borgpetersenii
serovar Hardjo-bovis JB197]
Length = 201
Score = 116 bits (291), Expect = 3e-24, Method: Composition-based stats.
Identities = 45/200 (22%), Positives = 96/200 (48%), Gaps = 20/200 (10%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLR----RQFREFEQLFWSGQSLETVCKSLKNHHN 81
+ ++ + SI+ +++II++ + F + +R ++LF ++ T LK+ +N
Sbjct: 17 SVPIVIVLVSIIGFTIIIERLIYFSKWKPIPLDDWRSLKELFRQ-KNWNTAIDYLKSMNN 75
Query: 82 IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSA 141
+ + + S + + + M A ++ ++ LS LG++++
Sbjct: 76 GPSVLVLQAGIE-----------SSLKNLEAAEEEMLSAGFAQILKMERFLSGLGTIATI 124
Query: 142 GLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIE 201
L+G+LG VLG++ F+ +G V GI E+LI+ +GL ++IP+ +AYN F +
Sbjct: 125 SPLLGVLGTVLGIIRSFEEGSGTRGAEV----GISEALITTAMGLAIAIPAYVAYNYFQK 180
Query: 202 DSKKFAMQMEGFANEFSAIL 221
+ +ME + + L
Sbjct: 181 KKEDTIAEMENLSGQALKYL 200
>gi|294661092|ref|YP_003572967.1| hypothetical protein Aasi_1464 [Candidatus Amoebophilus asiaticus
5a2]
gi|227336242|gb|ACP20839.1| hypothetical protein Aasi_1464 [Candidatus Amoebophilus asiaticus
5a2]
Length = 229
Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats.
Identities = 41/218 (18%), Positives = 99/218 (45%), Gaps = 21/218 (9%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS---GQ 67
+SI L ++ G ++ +F+ SIL+ +I++ + + +++ ++
Sbjct: 15 MSILELLLKGGW----VMVPIFLLSILTLYALIERLIILNKAGKVSQKWLNNLYNQILTG 70
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+E K L + + ++ + + +++ M++A E+
Sbjct: 71 DIEEA-KLLCEQKHTAITSVIQAGLENLPHEPQ-----------NLEKSMELAGQTEIYR 118
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYS--NNVVSIPGIIESLISILLG 185
+ + LS LG+++ ++G LG VLGM+ F ++A + + GI E++I+ G
Sbjct: 119 LEKNLSLLGAVAGIAPMLGFLGTVLGMIQAFMAMAHTTTAITPQLLAGGIYEAMITTAAG 178
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
L V I + I+Y + + ++ + ++E A++ I+
Sbjct: 179 LVVGILADISYKYILTNVERVSYKIEQTASQLIEIVQE 216
>gi|312143605|ref|YP_003995051.1| MotA/TolQ/ExbB proton channel [Halanaerobium sp. 'sapolanicus']
gi|311904256|gb|ADQ14697.1| MotA/TolQ/ExbB proton channel [Halanaerobium sp. 'sapolanicus']
Length = 232
Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats.
Identities = 49/216 (22%), Positives = 85/216 (39%), Gaps = 23/216 (10%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLR----RQFREFEQLFWSGQS 68
F LF G L I S+ S +VII+K++ F + R + E L G
Sbjct: 22 FFNLFTLGGPMT----LPLLIASVFSLAVIIEKTIFFARNKDNNFRLIKRIEILVEEGDI 77
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
L + + K R+ ++ E++++
Sbjct: 78 LSALNELKGKKSTNA-------------KLISTALAHNSEDPARLREVLQAVGEDEIKKM 124
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGL 186
+ L L ++ L+G+LG V+G++ F + A +N GI +LIS LGL
Sbjct: 125 EKHLPILDVVAMISPLLGLLGTVIGIISSFNILGTAAGAANPAQISSGIAAALISTALGL 184
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
++IP++I Y+ F ++ A M E ++S
Sbjct: 185 IIAIPTAIFYSYFSHMVERKAHNMNLSMVEIIDVVS 220
>gi|313886185|ref|ZP_07819915.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Porphyromonas asaccharolytica PR426713P-I]
gi|312924364|gb|EFR35143.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Porphyromonas asaccharolytica PR426713P-I]
Length = 224
Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats.
Identities = 38/215 (17%), Positives = 86/215 (40%), Gaps = 15/215 (6%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+S++ L G I+ +L + S+++ V + K + + R F +
Sbjct: 22 MSLWELACAGGW----IMIVLLLLSLVAIYVFVAKYIELRKVNRPDDSF---------IA 68
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
+ L+ A+ + +KG + + ++ + E+ +
Sbjct: 69 RIKDYLQMGRKDSAIALCKEKNTPEAHMIEKGLKRLGQPVSEVLPAIENVGSYEVGRLER 128
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI--PGIIESLISILLGLCV 188
L L ++++ ++G LG V GM+ F +A VS+ GI ++L++ + GL V
Sbjct: 129 GLPLLATIAAGAPMIGFLGTVTGMVQAFFDLANAPGGIDVSLLSSGIYQALVTTVGGLIV 188
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
I + YN + + ++E +F +++
Sbjct: 189 GIVTLFLYNYLVGQINRIVNRLEANTLDFMDVINE 223
>gi|108762277|ref|YP_632835.1| MotA/TolQ/ExbB proton channel family protein [Myxococcus xanthus DK
1622]
gi|108466157|gb|ABF91342.1| MotA/TolQ/ExbB proton channel family protein [Myxococcus xanthus DK
1622]
Length = 240
Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats.
Identities = 37/211 (17%), Positives = 85/211 (40%), Gaps = 18/211 (8%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQFRE----FEQLFWSGQSLETVCKSLKNHHN 81
+ +L S+ + V +++ + + + R + G ++ +
Sbjct: 15 VTLAMLIFASVAALIVAVERIIVLWGVGERSRALGETVNKHLLRGDV--AAARTAAERSD 72
Query: 82 IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSA 141
A IF++ ++S G I+ ++ A+ ++ L L ++ S
Sbjct: 73 AVAADIFLAGFDRMERSRTAGGA-------GIEAAVERERAQVALKLRRYLWILATIGSI 125
Query: 142 GLLVGILGAVLGMMGFFQSI-----AGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAY 196
VG+ G V G+M F+ + AG + + GI E+L++ +G+ V++ + + Y
Sbjct: 126 TPFVGLFGTVAGIMRSFKDLGLDVEAGGTGGSSAVMTGISEALVATAVGILVAVQAMVFY 185
Query: 197 NKFIEDSKKFAMQMEGFANEFSAILSRQTEG 227
N F + +++ +EF +L + G
Sbjct: 186 NYFQARLSRVLVELRLIGDEFVELLKERAAG 216
>gi|213962188|ref|ZP_03390452.1| MotA/TolQ/ExbB family biopolymer transport protein [Capnocytophaga
sputigena Capno]
gi|213955194|gb|EEB66512.1| MotA/TolQ/ExbB family biopolymer transport protein [Capnocytophaga
sputigena Capno]
Length = 232
Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats.
Identities = 47/220 (21%), Positives = 92/220 (41%), Gaps = 17/220 (7%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFW---SGQ 67
+SI + + G A II +LF+ ++ + ++ + + F S
Sbjct: 25 LSIMDMIVDGGTANIVIIGILFVMLAVALFLYFERLFAIKAASKVDKTFMYKIRDCISAG 84
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
L+ K L N +A + +S K + I++ ++ A E+ +
Sbjct: 85 RLD-AAKMLCVQSNTSVARLIEKGVSRIGKPL-----------EDINKAIENAGTLEVYK 132
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA--GYYSNNVVSIPGIIESLISILLG 185
+ + + L +++ AG ++G LG V+GM+ F +A G + GI ++ + + G
Sbjct: 133 LEKNTAILATIAGAGPMIGFLGTVVGMIMSFHEMASAGGQAEMGALAGGIYTAMATTVAG 192
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
L V I + + YN + + K ME A EF +L+
Sbjct: 193 LIVGIIAYVGYNHLVVKTDKVVHLMEANAVEFLDLLNEPL 232
>gi|163754134|ref|ZP_02161257.1| putative biopolymer transport protein [Kordia algicida OT-1]
gi|161326348|gb|EDP97674.1| putative biopolymer transport protein [Kordia algicida OT-1]
Length = 231
Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats.
Identities = 40/203 (19%), Positives = 82/203 (40%), Gaps = 18/203 (8%)
Query: 27 IITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS--LETVCKSLKNHHNIGL 84
++ +L ++ + ++ R + F S K L + +
Sbjct: 43 VLFVLLA---VALYIYFERLFAIKAASRIDKNFMNQIRDNVSSGKLDAAKMLCAQTDSPV 99
Query: 85 AAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLL 144
A + +KG + I++ ++ A E+ ++ + +S L +++ A +
Sbjct: 100 A-----------RLTEKGISRIGKPLEDINKAIENAGTLEVYKLEKNVSILATVAGAAPM 148
Query: 145 VGILGAVLGMMGFFQSIA--GYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIED 202
+G LG V+GM+ F +A G + GI ++ + + GL V I + I YN +
Sbjct: 149 IGFLGTVIGMILAFHEMATSGGQAEMGSLAGGIYTAMTTTVAGLIVGIIAYIGYNHLVVK 208
Query: 203 SKKFAMQMEGFANEFSAILSRQT 225
+ K QME A +F +L+
Sbjct: 209 TDKVVHQMEANAVDFLDLLNEPV 231
>gi|294783980|ref|ZP_06749302.1| biopolymer transport ExbB protein [Fusobacterium sp. 1_1_41FAA]
gi|294479792|gb|EFG27571.1| biopolymer transport ExbB protein [Fusobacterium sp. 1_1_41FAA]
Length = 202
Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats.
Identities = 43/202 (21%), Positives = 91/202 (45%), Gaps = 15/202 (7%)
Query: 27 IITLLFIFSILSWSVIIQKSVNFITLRRQ----FREFEQLFWSGQSLETVCKSLKNHHNI 82
I+ +L I SI +++VI+++ F + F+E + + ++ + +
Sbjct: 11 ILWVLTIISIAAFAVILERIAFFSRNEKAVGNTFKEEILSLVANKKIDEARNLCASKKSC 70
Query: 83 GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAG 142
SA+ ++ + +KG +QD + ++ +E +L+ L S+ S
Sbjct: 71 -----VASAVKKFLEKAEKGME----VQDY-EFILKEITIQETSPYESRLNLLSSIISIS 120
Query: 143 LLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISILLGLCVSIPSSIAYNKFIE 201
++G+LG V GM+ F +I+ Y + + + GI E+L++ GL ++IP + YN
Sbjct: 121 PMLGLLGTVTGMIKAFTNISKYGAGDAAIVADGIAEALLTTAAGLMIAIPVIVVYNYLNR 180
Query: 202 DSKKFAMQMEGFANEFSAILSR 223
+K +++ I R
Sbjct: 181 RLEKMENEIDDIVTNIINIFRR 202
>gi|209517608|ref|ZP_03266446.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. H160]
gi|209501904|gb|EEA01922.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. H160]
Length = 229
Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats.
Identities = 36/206 (17%), Positives = 80/206 (38%), Gaps = 12/206 (5%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVC--KSLKNHHNIG 83
++ ++ ++ ++II++S R + L + +
Sbjct: 15 GVLYVIAAMLFVALTIIIERSWFLQRASSGSRAVLDQVDRLEQLNAASLTACAEQFQALP 74
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
+A++ A G + ++ +D +D AI RE I L L ++ +
Sbjct: 75 MASLLKVA----------GRLAGQTSREELDACLDEAIMREAPNIDRFLWVLDTIVTLAP 124
Query: 144 LVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDS 203
L+G+ G ++GM FQ ++ + G+ E+LI+ GL V++ + +N
Sbjct: 125 LLGLFGTIVGMFNAFQVLSNPGNAPTQVTGGVAEALIATASGLFVAMIGLVFFNGLHTRV 184
Query: 204 KKFAMQMEGFANEFSAILSRQTEGNI 229
+ Q+E L+ +T ++
Sbjct: 185 RGVVHQLETVKAALVNRLAARTHESV 210
>gi|301061889|ref|ZP_07202619.1| transporter, MotA/TolQ/ExbB proton channel family protein [delta
proteobacterium NaphS2]
gi|300443993|gb|EFK08028.1| transporter, MotA/TolQ/ExbB proton channel family protein [delta
proteobacterium NaphS2]
Length = 460
Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats.
Identities = 43/222 (19%), Positives = 89/222 (40%), Gaps = 20/222 (9%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQL---FWSGQ 67
I++ G+ V I+ + + S+ +I+++ + +R
Sbjct: 249 ITMMDQLKSGGVLVIPILLVGLVASV----LIVERLIFLAKVRENTDTLMTRVTELVGSG 304
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+E K+ H + + M+ + + S + I+ + A+ RE
Sbjct: 305 DIEGAVKATYPHRDRPTGRVLMAGLRHREDSR-----------EVIESSLSEAMLREAPR 353
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
+ L L + ++ L+G+LG V GM+ FQ I + + + + GI E++++ +GL
Sbjct: 354 LERFLGALKACAAVAPLLGLLGTVTGMINTFQVITTHGTGDPRLMAGGISEAMVTTQVGL 413
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR-QTEG 227
V+IP I ++ + ME L R +T+G
Sbjct: 414 AVAIPVMIFAAFLGRRARNLSQDMEEKGLALMGTLLRLRTDG 455
>gi|296390952|ref|ZP_06880427.1| transport protein ExbB2 [Pseudomonas aeruginosa PAb1]
Length = 311
Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats.
Identities = 50/208 (24%), Positives = 95/208 (45%), Gaps = 8/208 (3%)
Query: 24 VKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS----LETVCKSLKNH 79
II +L + + SW ++ +K+ N + R F + F + L +
Sbjct: 83 AWVIIAILALMMVQSWVIMYRKNQNVGRVSRANGLFRERFAEVGTRLELLADDRELAARL 142
Query: 80 HNIGLAAIFMSAMSEWKKSCDKGARSP---IGIQDRIDRMMDVAIARELEEITEKLSFLG 136
+ L ++ A+ E + ++GA + + I MD +E +++ +LS L
Sbjct: 143 QHSSLWRLYQVAVKEIRTRREQGADTSSVSAATIEAIRASMDGVRTKENQQLGSRLSSLS 202
Query: 137 SMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIA 195
+ + G +G+LG VLG+M F A N+ PG+ +L++ +GL V+IP+
Sbjct: 203 NAIAGGPYIGLLGTVLGIMVVFLGTAMAGDVNINAIAPGMAAALLATAMGLFVAIPALFG 262
Query: 196 YNKFIEDSKKFAMQMEGFANEFSAILSR 223
YN+ + +K+ + M F +EF L+
Sbjct: 263 YNRLVTRNKEVSADMRVFVDEFVTRLAE 290
>gi|297624601|ref|YP_003706035.1| MotA/TolQ/ExbB proton channel [Truepera radiovictrix DSM 17093]
gi|297165781|gb|ADI15492.1| MotA/TolQ/ExbB proton channel [Truepera radiovictrix DSM 17093]
Length = 243
Score = 116 bits (290), Expect = 4e-24, Method: Composition-based stats.
Identities = 38/209 (18%), Positives = 79/209 (37%), Gaps = 20/209 (9%)
Query: 14 FALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG---QSLE 70
L + G + LL S+ + + ++ R S ++LE
Sbjct: 1 MELLLSGGPV--LVAILLV--SLYALYLFFERLFKLSKERLDADRLMARVNSAVRERNLE 56
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
++H +A + +A++ ++ A E + +T
Sbjct: 57 MAM-IACDNHGGPVARVLKAALARIPYGRPA-----------VEAAFQEAYLGEEQRLTR 104
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVS-IPGIIESLISILLGLCVS 189
L L +++ L+G+LG V GM+ F I+ + N + GI ++L++ GL V+
Sbjct: 105 GLRPLATIAQVATLLGLLGTVTGMIVAFAEISQQGTGNPAALAGGIGQALVTTAAGLIVA 164
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFANEFS 218
IP+ I ++ + +++E E
Sbjct: 165 IPAVIGHSYLSSRVEGILLEIERRREELM 193
>gi|115374109|ref|ZP_01461397.1| TolQ protein [Stigmatella aurantiaca DW4/3-1]
gi|310825543|ref|YP_003957901.1| MotA/TolQ/ExbB proton channel family protein [Stigmatella
aurantiaca DW4/3-1]
gi|115368885|gb|EAU67832.1| TolQ protein [Stigmatella aurantiaca DW4/3-1]
gi|309398615|gb|ADO76074.1| MotA/TolQ/ExbB proton channel family protein [Stigmatella
aurantiaca DW4/3-1]
Length = 224
Score = 116 bits (290), Expect = 4e-24, Method: Composition-based stats.
Identities = 44/200 (22%), Positives = 92/200 (46%), Gaps = 16/200 (8%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLA 85
++ +L + S+LS ++++++++ F R E + S E V ++K
Sbjct: 32 WVLWVLTVLSVLSIAIMLERALYFARHRLSQSEALAVRLSRGEFEAVRAAVKGRRG---- 87
Query: 86 AIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLV 145
+ + + E + +GA D +++++ +ARE + LSFLG++ + +
Sbjct: 88 -MEAAVLQEALAASSRGA-------DAVEQLIASVVARERPQYERFLSFLGTLGNNAPFI 139
Query: 146 GILGAVLGMMGFFQSI----AGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIE 201
G+ G VLG++ F + A + + GI E+L++ +GL V+IP+ +A+N F
Sbjct: 140 GLFGTVLGIIKAFHDLGSLSAKGGAIQQTVMAGISEALVATAVGLAVAIPAVVAFNVFNR 199
Query: 202 DSKKFAMQMEGFANEFSAIL 221
K + + L
Sbjct: 200 QLKTLTSRTTALGHALVGSL 219
>gi|114777003|ref|ZP_01452023.1| Biopolymer transport protein [Mariprofundus ferrooxydans PV-1]
gi|114552524|gb|EAU54984.1| Biopolymer transport protein [Mariprofundus ferrooxydans PV-1]
Length = 206
Score = 116 bits (290), Expect = 4e-24, Method: Composition-based stats.
Identities = 47/218 (21%), Positives = 93/218 (42%), Gaps = 22/218 (10%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITL----RRQFREFEQLFW 64
M+ + Q G ++ L SILS ++I +++ + + E
Sbjct: 1 MEAQVIEFIQQGG----TVMYFLLATSILSLTIIFERAWSLRRSVVIPLNVVNQVETSVR 56
Query: 65 SGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARE 124
G + + HHN ++ I W ++G + + +++ + +E
Sbjct: 57 DGDVKSAM--TFCQHHNTAMSRIL------WVALANRGVNRSV-----MKEILEESGRQE 103
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISIL 183
+ + + LG +++ L+G+LG V+GM+ FQ I+ V GI ++L +
Sbjct: 104 VAHLERFVGVLGVVAAIAPLLGLLGTVIGMIEVFQQISLVGVGKADVLAGGISKALNTTA 163
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
GL V+IPS +AY + +F +++E A F +L
Sbjct: 164 FGLVVAIPSMVAYRYYESRVDRFVLEIEHHALRFVELL 201
>gi|15618694|ref|NP_224980.1| proton channel protein TolQ [Chlamydophila pneumoniae CWL029]
gi|15836318|ref|NP_300842.1| macromolecule transporter [Chlamydophila pneumoniae J138]
gi|16752256|ref|NP_445624.1| MotA/TolQ/ExbB proton channel family protein [Chlamydophila
pneumoniae AR39]
gi|33242144|ref|NP_877085.1| ExbB [Chlamydophila pneumoniae TW-183]
gi|4377094|gb|AAD18923.1| Macromolecule transporter [Chlamydophila pneumoniae CWL029]
gi|8163550|gb|AAF73729.1| MotA/TolQ/ExbB proton channel family protein [Chlamydophila
pneumoniae AR39]
gi|8979158|dbj|BAA98993.1| macromolecule transporter [Chlamydophila pneumoniae J138]
gi|33236654|gb|AAP98742.1| ExbB [Chlamydophila pneumoniae TW-183]
Length = 232
Score = 116 bits (290), Expect = 4e-24, Method: Composition-based stats.
Identities = 41/216 (18%), Positives = 87/216 (40%), Gaps = 6/216 (2%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKS---VNFITLRRQFREFEQLFWSGQSL 69
I + + K I L I S+ +W+V+ QK NF+ + ++F
Sbjct: 9 IIQAYTEADFFGKSIFFCLLILSVCTWTVLHQKLAIQKNFLKAGKSLKDFLIKNRHAPLS 68
Query: 70 ETVCKSLKNHHNI--GLAAIFMSAMSEWKKSC-DKGARSPIGIQDRIDRMMDVAIARELE 126
+ L ++ + + + + ++S D+G ++ ++ + +
Sbjct: 69 LDIHPELSPFADLYFTIKRGTLELLDKNRQSAPDRGPILSSEDIQSLETLLGAIMPKYKA 128
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGL 186
+ + + S +G+LG V G++ F I+ S N + G+ +L + ++GL
Sbjct: 129 LLHKNSFIPATTISLAPFLGLLGTVWGILVAFTHISSGSSGNSAIMEGLATALGTTIIGL 188
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
V+IPS IA+N S + ++E A +
Sbjct: 189 FVAIPSLIAFNYLKAHSSELISEIEQTAYLLLNSIE 224
>gi|269302574|gb|ACZ32674.1| tolQ protein-like protein [Chlamydophila pneumoniae LPCoLN]
Length = 232
Score = 115 bits (289), Expect = 4e-24, Method: Composition-based stats.
Identities = 40/216 (18%), Positives = 86/216 (39%), Gaps = 6/216 (2%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKS---VNFITLRRQFREFEQLFWSGQSL 69
I + + K I L I S+ +W+V+ QK F+ + ++F
Sbjct: 9 IIQAYTEADFFGKSIFFCLLILSVCTWTVLHQKLAIQKKFLKAGKSLKDFLIKNRHAPLS 68
Query: 70 ETVCKSLKNHHNI--GLAAIFMSAMSEWKKSC-DKGARSPIGIQDRIDRMMDVAIARELE 126
+ L ++ + + + + ++S D+G ++ ++ + +
Sbjct: 69 LDIHPELSPFADLYFTIKRGTLELLDKNRQSAPDRGPILSSEDIQSLETLLGAIMPKYKA 128
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGL 186
+ + + S +G+LG V G++ F I+ S N + G+ +L + ++GL
Sbjct: 129 LLHKNSFIPATTISLAPFLGLLGTVWGILVAFTHISSGSSGNSAIMEGLATALGTTIIGL 188
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
V+IPS IA+N S + ++E A +
Sbjct: 189 FVAIPSLIAFNYLKAHSSELISEIEQTAYLLLNSIE 224
>gi|309389286|gb|ADO77166.1| outer membrane transport energization protein ExbB [Halanaerobium
praevalens DSM 2228]
Length = 216
Score = 115 bits (289), Expect = 4e-24, Method: Composition-based stats.
Identities = 53/221 (23%), Positives = 93/221 (42%), Gaps = 24/221 (10%)
Query: 9 MDIS-IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLR----RQFREFEQLF 63
MD + I+ L G L S+ S +VII+K++ F R + E L
Sbjct: 1 MDFNRIWNLLTLGGPMT----IPLLFASVFSLAVIIEKAIFFYRHNDSNSRLIKRIEILV 56
Query: 64 WSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAR 123
G L + + A + +A++ + P R+ ++
Sbjct: 57 EEGDILSALNELKGKTGTN--AKLLSAALA-------HNSEDPS----RLREVLKAVGED 103
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLIS 181
E++++ L L ++ L+G+LG V+G++ F + A +N GI +LIS
Sbjct: 104 EIKKMERHLPILDVVAMISPLLGLLGTVIGIISSFNILGTAAGAANPAQISSGIAAALIS 163
Query: 182 ILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
LGL ++IP++I Y+ F +K A QM E ++S
Sbjct: 164 TALGLIIAIPTAIFYSYFAHKVEKRAHQMNLSLVEIVDVVS 204
>gi|218890818|ref|YP_002439682.1| putative tolQ-type transport protein [Pseudomonas aeruginosa
LESB58]
gi|218771041|emb|CAW26806.1| probable tolQ-type transport protein [Pseudomonas aeruginosa
LESB58]
Length = 211
Score = 115 bits (289), Expect = 4e-24, Method: Composition-based stats.
Identities = 40/217 (18%), Positives = 91/217 (41%), Gaps = 18/217 (8%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
++ L G + + + SI + +++ ++ R E W + + +
Sbjct: 1 MWELVQAGGWM----MLPIILSSIAATAIVAERLWTLRKSRVAPPELLGQVWKQINGKQL 56
Query: 73 -CKSLKN-HHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
+ LK+ N L I + ++ K + + ++ A + + E+
Sbjct: 57 SAQKLKDLRANSPLGEILAAGLANSKHGR-----------EIMKECIEEAASGVIHELER 105
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQS-IAGYYSNNVVSIPGIIESLISILLGLCVS 189
L+ LG++++ L+G+LG V GM+ F + + +N+ + GI ++LI+ GL V+
Sbjct: 106 YLNALGTIAAMAPLLGLLGTVFGMIQIFGAFMDNGMANSPMLAAGISKALITTAAGLLVA 165
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
IP+ + + + + ME A + ++ E
Sbjct: 166 IPAVFFHRYLLRRVDELVIAMEQEAIKLVEVVQGDRE 202
>gi|300774591|ref|ZP_07084454.1| biopolymer transporter [Chryseobacterium gleum ATCC 35910]
gi|300506406|gb|EFK37541.1| biopolymer transporter [Chryseobacterium gleum ATCC 35910]
Length = 234
Score = 115 bits (289), Expect = 4e-24, Method: Composition-based stats.
Identities = 38/223 (17%), Positives = 84/223 (37%), Gaps = 18/223 (8%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFR----EFEQLFW 64
++ S + + G K ++ + + + S + ++ L + + F
Sbjct: 24 LEFSFWKIMFHGGAFAKIVMVTVLLLGVFSLYLFFERFFFIKRLASKTDSNFMNNIEDFI 83
Query: 65 SGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARE 124
+E K N I +S + I M+ E
Sbjct: 84 KAGKIEAATDYCKTQ-NSPEGRILEKGISRLGRPVSD-----------IVSAMEAQAQVE 131
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSN--NVVSIPGIIESLISI 182
+ + + L+ L + S ++G+LG V+GM+ F +++ + GI +L
Sbjct: 132 VANMEKNLNLLAVVPSIAPMLGLLGTVIGMIIAFFNLSHATGSFSPKTLSEGIYTALGQT 191
Query: 183 LLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+GL V+IP++ YN + KF ++ + + EF ++++
Sbjct: 192 AVGLAVAIPANFCYNILLTRIDKFVLKAQNMSGEFLDLINKPL 234
>gi|326571203|gb|EGE21227.1| motA/TolQ/ExbB proton channel [Moraxella catarrhalis BC7]
gi|326573122|gb|EGE23091.1| motA/TolQ/ExbB proton channel [Moraxella catarrhalis CO72]
Length = 182
Score = 115 bits (289), Expect = 4e-24, Method: Composition-based stats.
Identities = 40/212 (18%), Positives = 77/212 (36%), Gaps = 35/212 (16%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
MD + + + K + +L S++SW V I + +N +
Sbjct: 1 MDFGFY--WSHTDVVSKTLFFVLLALSMISWVVGIMRVINSRR------------RTANI 46
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
++ + + + G + ++ + IAR E+
Sbjct: 47 VDELTAQIN--------------------IQNLGDLPFDQRKMATEQKLLQQIARHRYEL 86
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLC 187
+ L LG+ +S +G+ G V G+ SI + + G + E+LI LGL
Sbjct: 87 EKGLPVLGTTASIAPFIGLFGTVWGIFHALHSIGATGQAGLAQVAGPVGEALIMTGLGLA 146
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
V+IP+ I YN +K+ A++ +
Sbjct: 147 VAIPAVIFYNIATRINKQAIHLATDTAHQILS 178
>gi|317406041|gb|EFV86310.1| transporter ExbB2 [Achromobacter xylosoxidans C54]
Length = 249
Score = 115 bits (289), Expect = 5e-24, Method: Composition-based stats.
Identities = 55/208 (26%), Positives = 97/208 (46%), Gaps = 8/208 (3%)
Query: 24 VKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS-GQSLETVCKSL---KNH 79
II +L + + SW ++I+KS N + F + F GQ LE + K
Sbjct: 28 AWVIIAILVLMMVQSWVIMIKKSRNVARVASANEAFRESFAKVGQRLELLADDAALAKRL 87
Query: 80 HNIGLAAIFMSAMSEWKKSCDKGARSP---IGIQDRIDRMMDVAIARELEEITEKLSFLG 136
+ L ++ A++E + ++GA + + I MD +E + + KL L
Sbjct: 88 EHASLWRLYRVAVNEIRTRREQGADTSSISAATIEAIRASMDAVRTKENQVLGAKLGSLS 147
Query: 137 SMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIA 195
+ + G +G+LG VLG+M F A N+ PG+ +L++ +GL V+IP+
Sbjct: 148 NAIAGGPYIGLLGTVLGIMVVFLGTAMAGDVNINAIAPGMAAALLATAMGLFVAIPALFG 207
Query: 196 YNKFIEDSKKFAMQMEGFANEFSAILSR 223
YN+ + +K+ + M F +EF L+
Sbjct: 208 YNRLVSRNKEVSADMRVFVDEFVTRLAE 235
>gi|171059234|ref|YP_001791583.1| MotA/TolQ/ExbB proton channel [Leptothrix cholodnii SP-6]
gi|170776679|gb|ACB34818.1| MotA/TolQ/ExbB proton channel [Leptothrix cholodnii SP-6]
Length = 192
Score = 115 bits (288), Expect = 5e-24, Method: Composition-based stats.
Identities = 44/199 (22%), Positives = 89/199 (44%), Gaps = 14/199 (7%)
Query: 31 LFIFSILSWSVIIQKSVNFITLR----RQFREFEQLFWSGQSLETVCKSLKNHHNIGLAA 86
+ + SI + ++II++ N ++ + E L SG + V + L ++ +G +
Sbjct: 1 MILCSIAALALIIERLANLREVKVAPPKLLDEVLGLTRSGLPSDDVLRKLADNSVLG--S 58
Query: 87 IFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVG 146
+ + + S + ++ + + A + ++ L+ LG+++SA L+G
Sbjct: 59 VLAAGIRSATPSRGTN-------EAQLRKAFESAGRAAVHKLERYLNALGTIASAAPLLG 111
Query: 147 ILGAVLGMMGFFQSIA-GYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKK 205
+LG V+GM+ F + + SN + GI +L + GL ++IPS + Y F
Sbjct: 112 LLGTVVGMIEIFGAQSPTSGSNPEMLAHGISVALYNTAFGLIIAIPSLMFYRYFRGRVDA 171
Query: 206 FAMQMEGFANEFSAILSRQ 224
F + +E A L R
Sbjct: 172 FVLDLELAAERLLPHLLRH 190
>gi|254480426|ref|ZP_05093673.1| transporter, MotA/TolQ/ExbB proton channel family, putative [marine
gamma proteobacterium HTCC2148]
gi|214039009|gb|EEB79669.1| transporter, MotA/TolQ/ExbB proton channel family, putative [marine
gamma proteobacterium HTCC2148]
Length = 196
Score = 115 bits (288), Expect = 5e-24, Method: Composition-based stats.
Identities = 40/200 (20%), Positives = 81/200 (40%), Gaps = 18/200 (9%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS---GQSLETV-CKSLKNHHNIG 83
+ L+ + SI+ ++ I++ + W G ++ K+LK +G
Sbjct: 1 MVLIVLCSIVVLAICIERLYTLNPKKIAPPHLLATVWKQLKGGEMDAARLKTLKQSSPLG 60
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
+ G + ++ + + A + ++ L+ LG++++
Sbjct: 61 -------------RILAAGLSNAYHGREVMKESIQEAAQHVVHDLERYLNTLGTIAAISP 107
Query: 144 LVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIED 202
L+G+LG V+GM+ F I + N V GI E+LI+ GL V+IP+ + FI
Sbjct: 108 LLGLLGTVVGMIRVFAEIMSQGTGNASVLAGGISEALITTAAGLTVAIPALAMHRYFIGK 167
Query: 203 SKKFAMQMEGFANEFSAILS 222
+++E + L
Sbjct: 168 IDAIVVELEQETIKLVDALH 187
>gi|326560396|gb|EGE10778.1| motA/TolQ/ExbB proton channel [Moraxella catarrhalis 7169]
Length = 182
Score = 115 bits (288), Expect = 5e-24, Method: Composition-based stats.
Identities = 41/216 (18%), Positives = 78/216 (36%), Gaps = 35/216 (16%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
MD + + K + +L S++SW V I + +N +
Sbjct: 1 MDFGFY--WSHTDAVSKTLFFVLLALSMISWVVGIMRVINSRR------------RTANI 46
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
++ + + + G + ++ + IAR E+
Sbjct: 47 VDELTAQIN--------------------IQNLGDLPFDQRKMATEQKLLQQIARHRYEL 86
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLC 187
+ L LG+ +S +G+ G V G+ SI + + G + E+LI LGL
Sbjct: 87 EKGLPVLGTTASIAPFIGLFGTVWGIFHALHSIGATGQAGLAQVAGPVGEALIMTGLGLA 146
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
V+IP+ I YN +K+ A++ + + R
Sbjct: 147 VAIPAVIFYNIATRINKQAIHLATDTAHQILSKIVR 182
>gi|237739471|ref|ZP_04569952.1| biopolymer transport exbB protein [Fusobacterium sp. 2_1_31]
gi|229423079|gb|EEO38126.1| biopolymer transport exbB protein [Fusobacterium sp. 2_1_31]
Length = 203
Score = 115 bits (288), Expect = 5e-24, Method: Composition-based stats.
Identities = 43/204 (21%), Positives = 79/204 (38%), Gaps = 19/204 (9%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQF-----REFEQLFWSGQSLETV--CKSLKNHH 80
+ + + I+ I+++ F + R E +QL G+ E + S K+
Sbjct: 11 MYFILLMGIVGLYAILERFFYFASKERNNYSKLPSEAKQLIKEGKIKEAIIFFNSNKSST 70
Query: 81 NIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSS 140
+ L I + E K++ ++ +++ + + L ++
Sbjct: 71 STVLKEILIYGYKENKETLSA-----------LEEKGKEKAIEQIKHLERNMWLLSLAAN 119
Query: 141 AGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKF 199
A L+G+LG V GM+ F SIA + + + GI E+L + GL V+IP I YN F
Sbjct: 120 ASPLLGLLGTVTGMITAFNSIALNGTGDAGILAKGISEALYTTAGGLFVAIPCMIFYNYF 179
Query: 200 IEDSKKFAMQMEGFANEFSAILSR 223
+ +E E
Sbjct: 180 NKRIDLVVADIEKTCTELLNYFRE 203
>gi|114320592|ref|YP_742275.1| MotA/TolQ/ExbB proton channel [Alkalilimnicola ehrlichii MLHE-1]
gi|114226986|gb|ABI56785.1| MotA/TolQ/ExbB proton channel [Alkalilimnicola ehrlichii MLHE-1]
Length = 218
Score = 115 bits (288), Expect = 6e-24, Method: Composition-based stats.
Identities = 41/207 (19%), Positives = 88/207 (42%), Gaps = 18/207 (8%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFW---SGQSLET-VCKSLKNHHNIG 83
+ + SIL+ ++I++++V R W ++ + L+ H +G
Sbjct: 12 MIPIVFCSILALAIIVERAVALQKRRVVPPGLLADTWRQVKAGQMDAVGLRRLRQHSPLG 71
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
+ G + ++ + ++ E + L+ LG++++
Sbjct: 72 -------------RVLGAGLANADCRREVMTEAIEDVGRHEAHRLERFLNTLGTLAAITP 118
Query: 144 LVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIED 202
L+G+LG V+GM+ F I+ + GI E+LI+ GL V+IP+ +AY F
Sbjct: 119 LLGLLGTVIGMIKVFSVISLQGLGDTPAMAGGISEALITTAAGLSVAIPTLMAYRYFRGR 178
Query: 203 SKKFAMQMEGFANEFSAILSRQTEGNI 229
++ +++E A + +L Q ++
Sbjct: 179 VEELVVEIEQEALKLVEVLQGQRSNDL 205
>gi|237739017|ref|ZP_04569498.1| biopolymer transport exbB protein [Fusobacterium sp. 2_1_31]
gi|229423617|gb|EEO38664.1| biopolymer transport exbB protein [Fusobacterium sp. 2_1_31]
Length = 202
Score = 115 bits (288), Expect = 6e-24, Method: Composition-based stats.
Identities = 43/202 (21%), Positives = 91/202 (45%), Gaps = 15/202 (7%)
Query: 27 IITLLFIFSILSWSVIIQKSVNFITLRRQ----FREFEQLFWSGQSLETVCKSLKNHHNI 82
I+ +L I SI +++VI+++ F + F+E + + ++ + +
Sbjct: 11 ILWVLTIISIAAFAVILERIAFFSRNEKAVGNTFKEEILSLIANKKIDEARNLCASKKSC 70
Query: 83 GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAG 142
SA+ ++ + +KG +QD + ++ +E +L+ L S+ S
Sbjct: 71 -----VASAVKKFLEKAEKGME----VQDY-EFILKEITIQETSPYESRLNLLSSIISIS 120
Query: 143 LLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISILLGLCVSIPSSIAYNKFIE 201
++G+LG V GM+ F +I+ Y + + + GI E+L++ GL ++IP + YN
Sbjct: 121 PMLGLLGTVTGMIKAFTNISKYGAGDAAIVADGIAEALLTTAAGLMIAIPVIVVYNYLNR 180
Query: 202 DSKKFAMQMEGFANEFSAILSR 223
+K +++ I R
Sbjct: 181 RLEKMENEIDDIVTNIINIFRR 202
>gi|121611790|ref|YP_999597.1| MotA/TolQ/ExbB proton channel [Verminephrobacter eiseniae EF01-2]
gi|121556430|gb|ABM60579.1| MotA/TolQ/ExbB proton channel [Verminephrobacter eiseniae EF01-2]
Length = 216
Score = 115 bits (288), Expect = 6e-24, Method: Composition-based stats.
Identities = 48/217 (22%), Positives = 82/217 (37%), Gaps = 25/217 (11%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLR----RQFREFEQLFWSGQS 68
+ ++ G I L S+L ++I ++ V T R R E + +
Sbjct: 1 MLSIIQAAGWP----IWPLIACSVLGLALIFERFVALKTARVAPPRLLDEAITVSFKALP 56
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
V L N L + S + +P + + M +
Sbjct: 57 PPDVVNQLAQ--NSALGEVLASGLRALN-------SNPACSETELRAAMQGTGRAVAHRL 107
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAG--------YYSNNVVSIPGIIESLI 180
+ L L +++SA L+G+LG V+GM+ F S AG SN + GI +L
Sbjct: 108 EKYLPALATIASAAPLLGLLGTVIGMIEIFGSQAGPGDMGQAIGGSNPAMLAHGISTALY 167
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEF 217
+ GL V+IP+ I + F + + +E A +F
Sbjct: 168 NTAFGLIVAIPALIFWRYFRARVDAYLLTLELAAEQF 204
>gi|291513614|emb|CBK62824.1| outer membrane transport energization protein ExbB (TC 2.C.1.1.1)
[Alistipes shahii WAL 8301]
Length = 206
Score = 114 bits (287), Expect = 7e-24, Method: Composition-based stats.
Identities = 35/220 (15%), Positives = 83/220 (37%), Gaps = 19/220 (8%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+ ++ LF + G + L ++ + +++ + F S
Sbjct: 1 MGLWTLFTKGGWL----MWPLLALGGVTIFIFVERFMAIRKASVLDMNFMNRIRDYISDG 56
Query: 71 TVCKS--LKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ + L + +A + + + + ++ E+ ++
Sbjct: 57 KISTAVNLCKKTDTPIARMIEKGIERIGRPMSD-----------VQTAIENVANLEVSKL 105
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN--VVSIPGIIESLISILLGL 186
L FL +++ ++G LG VLGM+ F ++ + G+ ++++ ++GL
Sbjct: 106 ENGLPFLATIAGGAPMIGFLGTVLGMVQTFMDMSAAGGTVDLGLLSSGMYVAMVTTVMGL 165
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
V IP+ YN + +K QME + F IL++ +
Sbjct: 166 IVGIPAYFGYNYLVARIEKLVFQMEANSIAFMDILNQPVQ 205
>gi|110597025|ref|ZP_01385314.1| MotA/TolQ/ExbB proton channel [Chlorobium ferrooxidans DSM 13031]
gi|110341216|gb|EAT59681.1| MotA/TolQ/ExbB proton channel [Chlorobium ferrooxidans DSM 13031]
Length = 249
Score = 114 bits (287), Expect = 7e-24, Method: Composition-based stats.
Identities = 44/209 (21%), Positives = 90/209 (43%), Gaps = 11/209 (5%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITL--RRQFREFEQLFWS---G 66
S+F + G V ++ L + I + ++++ + + EF L
Sbjct: 32 SMFHAVWKGGPVV-SVLMALILMVI---AYVVERIIALNKASGKGNIPEFVHLLKQDIDN 87
Query: 67 QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
++ +H + LAA+ S + +KK +++ ++ A E+
Sbjct: 88 GDIDQAILKCDDHQSS-LAAVLRSVLERYKKLAQFNVTDREKKISEMEKAVEEATIMEMP 146
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISILLG 185
+ + L + +++S +VG+LG LGM+ F ++A + + V + GI E+L + LG
Sbjct: 147 LLEKNLVAISTIASISTMVGLLGTTLGMIRAFAAMATSGAPDAVQLSLGISEALFNTALG 206
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFA 214
+C I +AYN F +F ++ A
Sbjct: 207 ICGGIMGIVAYNIFTSRVDRFNYTIDEAA 235
>gi|300113154|ref|YP_003759729.1| MotA/TolQ/ExbB proton channel [Nitrosococcus watsonii C-113]
gi|299539091|gb|ADJ27408.1| MotA/TolQ/ExbB proton channel [Nitrosococcus watsonii C-113]
Length = 233
Score = 114 bits (287), Expect = 7e-24, Method: Composition-based stats.
Identities = 39/186 (20%), Positives = 70/186 (37%), Gaps = 14/186 (7%)
Query: 44 QKSVNFITLRRQFREFEQLFWSGQSLETVCKSL--KNHHNIGLAAIFMSAMSEWKKSCDK 101
++ R + W Q + K + L I + + +S
Sbjct: 28 ERFWFLRRQRVVPKHIASQIWQWQYRNQLDKIHIKSVRESSPLGRILAAGLVNRNRSR-- 85
Query: 102 GARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI 161
+ + ++ E+ L+ LG++++ L+G+LG V+GM+ F I
Sbjct: 86 ---------EIMKESIEDVGRHVTLELERFLNTLGTIAAITPLLGLLGTVIGMIKVFTVI 136
Query: 162 AGYY-SNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAI 220
N V GI E+LI+ GL V+IPS + Y F + + ME A + +
Sbjct: 137 TAQGVDNPAVLAGGISEALITTAAGLAVAIPSLMFYRYFHGKVMRLVVDMEEQAIKLVEV 196
Query: 221 LSRQTE 226
+ E
Sbjct: 197 MHGDRE 202
>gi|90415822|ref|ZP_01223755.1| MotA/TolQ/ExbB proton channel family protein [marine gamma
proteobacterium HTCC2207]
gi|90332196|gb|EAS47393.1| MotA/TolQ/ExbB proton channel family protein [marine gamma
proteobacterium HTCC2207]
Length = 209
Score = 114 bits (287), Expect = 7e-24, Method: Composition-based stats.
Identities = 46/217 (21%), Positives = 96/217 (44%), Gaps = 18/217 (8%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG-Q 67
M+ +++ +F+ G + L I SI+ ++ I++ + R W +
Sbjct: 1 MEDTVYQIFLAGGWL----MWPLLICSIIVVAISIERFITLKADRIAPSGLLTRVWQQLR 56
Query: 68 SLETVCKSLKN-HHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
E +SL+ L I + +S + ++ + ++ A A+ +
Sbjct: 57 DRELAGESLRELRDTSPLGYILAAGIS-----------NSGHGREIMKDSIEEAAAQVVH 105
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV-SIPGIIESLISILLG 185
E+ L+ L ++++ L+G+LG VLGM+ F I + + N GI ++LI+ G
Sbjct: 106 ELERFLTLLSTIANMAPLIGLLGTVLGMIQVFADIMLFGTGNAADLAGGISQALITTAAG 165
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
L ++IP+ I++ F + +Q+EG A + +
Sbjct: 166 LTIAIPAMISHRYFERHVESLVVQLEGQATKLVDAMH 202
>gi|262372461|ref|ZP_06065740.1| TolQ [Acinetobacter junii SH205]
gi|262312486|gb|EEY93571.1| TolQ [Acinetobacter junii SH205]
Length = 209
Score = 114 bits (287), Expect = 8e-24, Method: Composition-based stats.
Identities = 55/212 (25%), Positives = 106/212 (50%), Gaps = 21/212 (9%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
++ L G + L + SI + ++ I++ +I L+R LF +G + ETV
Sbjct: 1 MWELVKAGGWL----MLPLILSSIFTVAITIER---YIRLKRSQVLPRDLFVNGSNAETV 53
Query: 73 CKSLKNH--HNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
+L+ L I ++ E K+ ++ AR+ M+ A ++E+ + +
Sbjct: 54 ISNLQQEQAKKSPLGRILVAGY-EHKEQGEQFARAQ----------MEAAASQEISFLEK 102
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFF-QSIAGYYSNNVVSIPGIIESLISILLGLCVS 189
++FLG++S+ L+G+LG VLG++ F G N + +PGI ++LI+ +G+ ++
Sbjct: 103 NINFLGTLSAIAPLLGLLGTVLGIIESFLVFDVGSAGNASMMMPGISKALITTAVGMLIA 162
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
IP+ IAY F ++ ++E + F A L
Sbjct: 163 IPAMIAYRYFQRVVHEYTAELEQQSTLFHAAL 194
>gi|325981587|ref|YP_004293989.1| MotA/TolQ/ExbB proton channel [Nitrosomonas sp. AL212]
gi|325531106|gb|ADZ25827.1| MotA/TolQ/ExbB proton channel [Nitrosomonas sp. AL212]
Length = 202
Score = 114 bits (287), Expect = 8e-24, Method: Composition-based stats.
Identities = 43/215 (20%), Positives = 88/215 (40%), Gaps = 13/215 (6%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
+ +L G I + I SI++ ++I ++ + + L V
Sbjct: 1 MLSLIQAAGWP----IWPIIIASIVALAIIGERMWTLR---------LSVVSPKELLPRV 47
Query: 73 CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKL 132
K + + S + G R+ ++ + ++ + + +++ L
Sbjct: 48 LNEYKRNGVNPEMLARLQMHSPLGQILAAGLRNVKSTREVMKESIEESGRVIVHDLSRYL 107
Query: 133 SFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPS 192
+ LG++++ L+G+ G ++GM+ F S + SN GI +L + G+ V+IPS
Sbjct: 108 TTLGTIAALSPLMGLFGTLVGMIEIFGSNSPTGSNPAQLAYGISVALYNAAFGILVAIPS 167
Query: 193 SIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEG 227
I Y F F ++ME A + I+ + EG
Sbjct: 168 MIFYRHFRAKVDDFVVEMELQALKLVEIVHGEREG 202
>gi|328952085|ref|YP_004369419.1| MotA/TolQ/ExbB proton channel [Desulfobacca acetoxidans DSM 11109]
gi|328452409|gb|AEB08238.1| MotA/TolQ/ExbB proton channel [Desulfobacca acetoxidans DSM 11109]
Length = 231
Score = 114 bits (286), Expect = 9e-24, Method: Composition-based stats.
Identities = 37/190 (19%), Positives = 78/190 (41%), Gaps = 16/190 (8%)
Query: 40 SVIIQKSVNFITLRRQFREFEQL---FWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWK 96
++ I K++ F R F F + + + A + ++A+ E
Sbjct: 31 AIAIDKALTFYRYRFNLDRFVAEIEPFLQQGDWPQIISRCEQESGL-EARMLLAALREIS 89
Query: 97 KSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMG 156
+S ++++ +M+ R + ++L FLG++ + +G+ G VLG++
Sbjct: 90 RS-----------KEKVQHIMEGERLRVELYLGKRLGFLGTLGANAPFIGLFGTVLGIIH 138
Query: 157 FFQSIA-GYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFAN 215
F+ +A + GI E+L++ +GL V+IP+ + YN F + +
Sbjct: 139 AFKDLALAEGGGGPAVMAGIAEALVATAVGLLVAIPAVVLYNFFHRRLQVVQERSRILEQ 198
Query: 216 EFSAILSRQT 225
A L +
Sbjct: 199 LLLARLDEEA 208
>gi|152996172|ref|YP_001341007.1| MotA/TolQ/ExbB proton channel [Marinomonas sp. MWYL1]
gi|150837096|gb|ABR71072.1| MotA/TolQ/ExbB proton channel [Marinomonas sp. MWYL1]
Length = 208
Score = 114 bits (286), Expect = 9e-24, Method: Composition-based stats.
Identities = 40/204 (19%), Positives = 83/204 (40%), Gaps = 18/204 (8%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITL----RRQFREFEQLFWSGQSLETVCKSLKNHHNIG 83
+ L SIL+ ++II++ + + + +S++ G
Sbjct: 12 MWPLMACSILALAIIIERFWTLRKAGVAPKGLLSDVMARLRDDRMTIEYIRSMQAK--TG 69
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
LA+IF + + K + + A + + E+ ++ LG++++
Sbjct: 70 LASIFAAGLLNSKHGRGA-----------MKESVQEAASHVIHELERFMNTLGTIAAISP 118
Query: 144 LVGILGAVLGMMGFFQSIAGYYSNNVVS-IPGIIESLISILLGLCVSIPSSIAYNKFIED 202
L+G+LG V+GM+ F + + N GI E+L++ GL V+IP+ I + F
Sbjct: 119 LLGLLGTVVGMIKVFSVLMESGAGNTALLAGGISEALLTTAAGLGVAIPALIFHRFFSRR 178
Query: 203 SKKFAMQMEGFANEFSAILSRQTE 226
+ + ME + + L +
Sbjct: 179 IDELVVTMEQQSTKLIDSLHGDRD 202
>gi|226952973|ref|ZP_03823437.1| biopolymer transport protein (EXBB-like) [Acinetobacter sp. ATCC
27244]
gi|226836294|gb|EEH68677.1| biopolymer transport protein (EXBB-like) [Acinetobacter sp. ATCC
27244]
Length = 209
Score = 114 bits (286), Expect = 9e-24, Method: Composition-based stats.
Identities = 50/212 (23%), Positives = 100/212 (47%), Gaps = 21/212 (9%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
++ L G + L + SI + ++II++ +I L+R + L G +E V
Sbjct: 1 MWELVKAGGWL----MLPLILSSIFTVAIIIER---YIRLKRSQVLPQALLVKGADVENV 53
Query: 73 CKSLKNHH--NIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
+L+ + L I + + ++ AR+ M+ + E+ + +
Sbjct: 54 ISTLEQPEINHSALGRILKAGYD-HQDQGEQFARAQ----------MEATASEEITHLEK 102
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSI-AGYYSNNVVSIPGIIESLISILLGLCVS 189
++FLG++ + L+G+LG VLG++ F + G N + +PGI +LI+ +G+ ++
Sbjct: 103 NINFLGTLGAIAPLLGLLGTVLGIIEAFLVVDVGSAGNASMMMPGISTALITTAVGMLIA 162
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
IP+ IAY F ++ ++E + F A L
Sbjct: 163 IPAMIAYRYFQRVVHEYVAELEQQSTLFHAAL 194
>gi|116328961|ref|YP_798681.1| transport protein, TolQ-like [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
gi|116330431|ref|YP_800149.1| transport protein, TolQ-like [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
gi|116121705|gb|ABJ79748.1| Transport protein, TolQ-like [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
gi|116124120|gb|ABJ75391.1| Transport protein, TolQ-like [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
Length = 346
Score = 114 bits (286), Expect = 1e-23, Method: Composition-based stats.
Identities = 43/207 (20%), Positives = 75/207 (36%), Gaps = 19/207 (9%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFW---SGQSL 69
LF+ G + L SI++ +I ++ T + + + + L
Sbjct: 69 FVDLFLLGGW----TMYPLAFSSIVALGIIFERIYFLATAKLLPKGYNIDLGETMDAKGL 124
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
V + + I G G + + ++ A + +
Sbjct: 125 NAVQGFFDERKDYKITQIL-----------SGGIDVSSGDAEIFAKGVEREAAEIITVLE 173
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCV 188
L L ++S+ L+G LG V GM+ F +IA N V GI E+LI+ GL V
Sbjct: 174 RGLVILAAVSTIAPLIGFLGTVSGMINAFDAIANADQVNAKVVAGGIKEALITTAAGLIV 233
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFAN 215
+IP+ + F ++E AN
Sbjct: 234 AIPAMTFHQYLTSRIDGFTSEIEEAAN 260
>gi|49079200|gb|AAT49865.1| PA2983 [synthetic construct]
Length = 212
Score = 114 bits (286), Expect = 1e-23, Method: Composition-based stats.
Identities = 40/217 (18%), Positives = 90/217 (41%), Gaps = 18/217 (8%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
++ L G + + + SI + +++ ++ R E W + +
Sbjct: 1 MWELVQAGGWM----MLPIILSSIAATAIVAERLWTLRKSRVAPPELLGQVWKQIKGKQL 56
Query: 73 -CKSLKN-HHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
+ LK+ N L I + ++ K + + ++ A + + E+
Sbjct: 57 SAQKLKDLRANSPLGEILAAGLANSKHGR-----------EIMKECIEEAASGVIHELER 105
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQS-IAGYYSNNVVSIPGIIESLISILLGLCVS 189
L+ LG++++ L+G+LG V GM+ F + + +N+ + GI ++LI+ GL V+
Sbjct: 106 YLNALGTIAAMAPLLGLLGTVFGMIQIFGAFMDNGMANSPMLAAGISKALITTAAGLLVA 165
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
IP+ + + + + ME A + ++ E
Sbjct: 166 IPAVFFHRYLLRRVDELVIAMEQEAIKLVEVVQGDRE 202
>gi|294783464|ref|ZP_06748788.1| biopolymer transport ExbB protein [Fusobacterium sp. 1_1_41FAA]
gi|294480342|gb|EFG28119.1| biopolymer transport ExbB protein [Fusobacterium sp. 1_1_41FAA]
Length = 193
Score = 114 bits (286), Expect = 1e-23, Method: Composition-based stats.
Identities = 43/204 (21%), Positives = 78/204 (38%), Gaps = 19/204 (9%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQF-----REFEQLFWSGQSLETV--CKSLKNHH 80
+ + + I+ I+++ F R E +QL G+ E + S K+
Sbjct: 1 MYFILLMGIVGLYAILERFSYFALKERNNYSKLPSEAKQLIKEGKIKEAIIFFNSNKSST 60
Query: 81 NIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSS 140
+ L I + E K++ ++ +++ + + L ++
Sbjct: 61 STVLKEILIYGYKENKETLSA-----------LEEKGKEKAIEQIKHLERNMWLLSLAAN 109
Query: 141 AGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKF 199
A L+G+LG V GM+ F SIA + + + GI E+L + GL V+IP I YN F
Sbjct: 110 ASPLLGLLGTVTGMITAFNSIALNGTGDAGILAKGISEALYTTAGGLFVAIPCMIFYNYF 169
Query: 200 IEDSKKFAMQMEGFANEFSAILSR 223
+ +E E
Sbjct: 170 NKRIDLVVTDIEKTCTELLNYFRE 193
>gi|15598179|ref|NP_251673.1| tolQ-type transport protein [Pseudomonas aeruginosa PAO1]
gi|107102532|ref|ZP_01366450.1| hypothetical protein PaerPA_01003596 [Pseudomonas aeruginosa PACS2]
gi|116050985|ref|YP_790190.1| putative tolQ-type transport protein [Pseudomonas aeruginosa
UCBPP-PA14]
gi|152985890|ref|YP_001347550.1| putative tolQ-type transport protein [Pseudomonas aeruginosa PA7]
gi|254235957|ref|ZP_04929280.1| hypothetical protein PACG_01912 [Pseudomonas aeruginosa C3719]
gi|254241689|ref|ZP_04935011.1| hypothetical protein PA2G_02397 [Pseudomonas aeruginosa 2192]
gi|296388524|ref|ZP_06877999.1| putative tolQ-type transport protein [Pseudomonas aeruginosa PAb1]
gi|313108225|ref|ZP_07794304.1| putative tolQ-type transport protein [Pseudomonas aeruginosa 39016]
gi|9949082|gb|AAG06371.1|AE004723_15 probable tolQ-type transport protein [Pseudomonas aeruginosa PAO1]
gi|115586206|gb|ABJ12221.1| putative tolQ-type transport protein [Pseudomonas aeruginosa
UCBPP-PA14]
gi|126167888|gb|EAZ53399.1| hypothetical protein PACG_01912 [Pseudomonas aeruginosa C3719]
gi|126195067|gb|EAZ59130.1| hypothetical protein PA2G_02397 [Pseudomonas aeruginosa 2192]
gi|150961048|gb|ABR83073.1| probable tolQ-type transport protein [Pseudomonas aeruginosa PA7]
gi|310880806|gb|EFQ39400.1| putative tolQ-type transport protein [Pseudomonas aeruginosa 39016]
Length = 211
Score = 114 bits (286), Expect = 1e-23, Method: Composition-based stats.
Identities = 40/217 (18%), Positives = 90/217 (41%), Gaps = 18/217 (8%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
++ L G + + + SI + +++ ++ R E W + +
Sbjct: 1 MWELVQAGGWM----MLPIILSSIAATAIVAERLWTLRKSRVAPPELLGQVWKQIKGKQL 56
Query: 73 -CKSLKN-HHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
+ LK+ N L I + ++ K + + ++ A + + E+
Sbjct: 57 SAQKLKDLRANSPLGEILAAGLANSKHGR-----------EIMKECIEEAASGVIHELER 105
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQS-IAGYYSNNVVSIPGIIESLISILLGLCVS 189
L+ LG++++ L+G+LG V GM+ F + + +N+ + GI ++LI+ GL V+
Sbjct: 106 YLNALGTIAAMAPLLGLLGTVFGMIQIFGAFMDNGMANSPMLAAGISKALITTAAGLLVA 165
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
IP+ + + + + ME A + ++ E
Sbjct: 166 IPAVFFHRYLLRRVDELVIAMEQEAIKLVEVVQGDRE 202
>gi|93006729|ref|YP_581166.1| MotA/TolQ/ExbB proton channel [Psychrobacter cryohalolentis K5]
gi|92394407|gb|ABE75682.1| MotA/TolQ/ExbB proton channel [Psychrobacter cryohalolentis K5]
Length = 238
Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats.
Identities = 40/211 (18%), Positives = 74/211 (35%), Gaps = 31/211 (14%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D+ + + + + LL SI+SW I + + L +
Sbjct: 9 DMDFTTYWQYSDMVTRTLFFLLLALSIISWVTGIIRVLQSRKL----------------V 52
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
TV L M E K D + ++ + I R
Sbjct: 53 TTVADDLSQQ------------MQE--KRSDLSVADAATRRLITEQTLLKHIGRYRFASE 98
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCV 188
L LG+ ++ +G+ G V G+ ++I + + G + E+LI LG+ V
Sbjct: 99 RGLPILGTTAAIAPFIGLFGTVWGIFHALRNIGMSGQAGLGQVAGPVGEALIMTGLGIAV 158
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
+IP+ + YN + ++ Q A++ A
Sbjct: 159 AIPAVVFYNLAVRINRSIMYQANDRAHDLLA 189
>gi|226951957|ref|ZP_03822421.1| biopolymer transport protein (ExbB) [Acinetobacter sp. ATCC 27244]
gi|294649219|ref|ZP_06726657.1| biopolymer transport protein [Acinetobacter haemolyticus ATCC
19194]
gi|226837295|gb|EEH69678.1| biopolymer transport protein (ExbB) [Acinetobacter sp. ATCC 27244]
gi|292824886|gb|EFF83651.1| biopolymer transport protein [Acinetobacter haemolyticus ATCC
19194]
Length = 206
Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats.
Identities = 40/220 (18%), Positives = 89/220 (40%), Gaps = 35/220 (15%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
M+ S++ + K + +L SI +W++ I + + L++Q + +
Sbjct: 1 MNFSVY--WQHADAVSKTLYFVLLAMSIATWTIFILRILGTRQLKQQAYAQLAQ--ALAT 56
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
L+ + L +A ++ + I+ E +
Sbjct: 57 LKAKLQPLTFEQRKAVA----------------------------EQALLRQISAEKSQA 88
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISILLGLC 187
+ +S LG+++S VG+ G V G+ ++ + + + E+LI LGL
Sbjct: 89 EKGVSVLGTIASLAPFVGLFGTVWGIFHALVAVGKSGQAGLAQVAIPVGEALIMTGLGLA 148
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFS--AILSRQT 225
V+IP+ +AYN + ++ A +++ A+ +L ++T
Sbjct: 149 VAIPAVLAYNICMRFNRGLAHELQDQAHLLLIDTMLQQET 188
>gi|257452637|ref|ZP_05617936.1| biopolymer transport exbB protein [Fusobacterium sp. 3_1_5R]
gi|257466494|ref|ZP_05630805.1| biopolymer transport exbB protein [Fusobacterium gonidiaformans
ATCC 25563]
gi|315917651|ref|ZP_07913891.1| biopolymer transport exbB protein [Fusobacterium gonidiaformans
ATCC 25563]
gi|317059176|ref|ZP_07923661.1| biopolymer transport exbB protein [Fusobacterium sp. 3_1_5R]
gi|313684852|gb|EFS21687.1| biopolymer transport exbB protein [Fusobacterium sp. 3_1_5R]
gi|313691526|gb|EFS28361.1| biopolymer transport exbB protein [Fusobacterium gonidiaformans
ATCC 25563]
Length = 202
Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats.
Identities = 44/202 (21%), Positives = 88/202 (43%), Gaps = 15/202 (7%)
Query: 27 IITLLFIFSILSWSVIIQKSVNF----ITLRRQFREFEQLFWSGQSLETVCKSLKNHHNI 82
I+ +LF S+ + ++I++K+V F + F++ S +E + +
Sbjct: 11 ILWVLFFMSMGALAIILEKTVFFTTKEKKVNANFKKDINDLISAGKVEEAIQLCETQKGS 70
Query: 83 GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAG 142
+I + K KG +QD + ++ + + + LS L ++ S
Sbjct: 71 VAGSI-----KTFLKRAKKG----QDVQDY-ESIIKEIMLESMSPLDRGLSSLEAIGSLA 120
Query: 143 LLVGILGAVLGMMGFFQSIAGYYSNN-VVSIPGIIESLISILLGLCVSIPSSIAYNKFIE 201
+ G+LG V GM+ F +I+ + + + GI E+L++ GL V+IP AYN F +
Sbjct: 121 PMCGLLGTVTGMIKAFINISKMGAGDPTIVADGISEALVTTAAGLYVAIPVIAAYNIFSK 180
Query: 202 DSKKFAMQMEGFANEFSAILSR 223
+ + +++ I R
Sbjct: 181 IAARREDEVDKIVANIINIFRR 202
>gi|258592654|emb|CBE68963.1| MotA/TolQ/ExbB proton channel [NC10 bacterium 'Dutch sediment']
Length = 200
Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats.
Identities = 48/214 (22%), Positives = 88/214 (41%), Gaps = 21/214 (9%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFR-EFEQLFWSGQSLET 71
+ AL ++ G ++ L SI S +V+I++ + + LR E + S + E
Sbjct: 4 LIALLIKGGP----VMIPLLCCSITSLAVVIERGLFWWRLRPSGEMEHLLMLASAGNWED 59
Query: 72 VCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEK 131
K +A + + + R+P M+ A EL +
Sbjct: 60 AHK-FGELSRSPVARVLAAGIRH---------RNPAPTL-----AMEAAAHEELTHMRRY 104
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCVSI 190
L L ++ + L+G+LG V GM+G F +A N +I G+ E+LI+ GL ++I
Sbjct: 105 LPLLDTVITLSPLLGLLGTVTGMIGSFGVMASGGINQPHAITGGVAEALIATATGLGIAI 164
Query: 191 PSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+ + YN F ++ +E + + L
Sbjct: 165 ATLVPYNYFTTRVERIMGDIERYGSRLELALKEP 198
>gi|296113018|ref|YP_003626956.1| motA/TolQ/ExbB proton channel [Moraxella catarrhalis RH4]
gi|295920712|gb|ADG61063.1| motA/TolQ/ExbB proton channel [Moraxella catarrhalis RH4]
gi|326564001|gb|EGE14246.1| motA/TolQ/ExbB proton channel [Moraxella catarrhalis 103P14B1]
gi|326564055|gb|EGE14299.1| motA/TolQ/ExbB proton channel [Moraxella catarrhalis 12P80B1]
gi|326570522|gb|EGE20562.1| motA/TolQ/ExbB proton channel [Moraxella catarrhalis BC8]
gi|326576119|gb|EGE26035.1| motA/TolQ/ExbB proton channel [Moraxella catarrhalis 101P30B1]
gi|326577069|gb|EGE26963.1| motA/TolQ/ExbB proton channel [Moraxella catarrhalis O35E]
Length = 182
Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats.
Identities = 40/212 (18%), Positives = 76/212 (35%), Gaps = 35/212 (16%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
MD + + K + +L S++SW V I + +N +
Sbjct: 1 MDFGFY--WSHTDAVSKTLFFVLLALSMISWVVGIMRVINSRR------------RTANI 46
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
++ + + + G + ++ + IAR E+
Sbjct: 47 VDELTAQIN--------------------IQNLGDLPFDQRKMATEQKLLQQIARHRYEL 86
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLC 187
+ L LG+ +S +G+ G V G+ SI + + G + E+LI LGL
Sbjct: 87 EKGLPVLGTTASIAPFIGLFGTVWGIFHALHSIGATGQAGLAQVAGPVGEALIMTGLGLA 146
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
V+IP+ I YN +K+ A++ +
Sbjct: 147 VAIPAVIFYNIATRINKQAIHLATDTAHQILS 178
>gi|167948429|ref|ZP_02535503.1| MotA/TolQ/ExbB proton channel [Endoriftia persephone
'Hot96_1+Hot96_2']
Length = 221
Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats.
Identities = 42/221 (19%), Positives = 93/221 (42%), Gaps = 22/221 (9%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ----LFWSG 66
+ +F G + + S+++ ++++++ + +R EF
Sbjct: 14 LPVFEFVKAGGWL----MLPIITCSVVASAIVLERFWSLQR-KRVMPEFLMQQILRLHRD 68
Query: 67 QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
+ L+ + L I + + + S ++ + ++ + +
Sbjct: 69 KKLDKA-DLKTLRESSPLGRILAAGLLNHRHS-----------KEVMKESIEEVGRQVVL 116
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYY-SNNVVSIPGIIESLISILLG 185
E+ L+ LG+++S L+G+LG V+GM+ F +I N + GI E+LI+ G
Sbjct: 117 ELERYLNTLGTIASITPLLGLLGTVIGMIKVFGAIVTAGVGNPGILAGGISEALITTATG 176
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
L V+IPS + + F+ +K + ME A + ++ + E
Sbjct: 177 LSVAIPSLMFHRYFMGLVEKLVVAMEEQALKLIEVIHGERE 217
>gi|114331497|ref|YP_747719.1| MotA/TolQ/ExbB proton channel [Nitrosomonas eutropha C91]
gi|114308511|gb|ABI59754.1| MotA/TolQ/ExbB proton channel [Nitrosomonas eutropha C91]
Length = 202
Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats.
Identities = 43/213 (20%), Positives = 86/213 (40%), Gaps = 21/213 (9%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFR----EFEQLFWSGQS 68
+F++ G I + + S+++ +I ++ + + R Q +
Sbjct: 1 MFSIIQAAGWP----IWPIILASVIAVGIIGERLWSLRLSKVSPRDLLPRVLQEYRRSGV 56
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
L++H L + ++ + + ++D I+ VA +
Sbjct: 57 HADTLTHLQSH--SPLGQVLVAGLKNIDSPREI-------MKDSIEEAGRVAAHE----L 103
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCV 188
L+ LG+++S L+G+ G ++GM+ F S SN V GI +L + G+ V
Sbjct: 104 ERYLTTLGTIASLSPLMGLFGTLIGMIEIFGSGTPSGSNPVQLAHGISVALYNSAFGILV 163
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+IPS I Y F + ++ME A + I+
Sbjct: 164 AIPSIIFYRHFRAKVDELVLEMELQALKLVEIV 196
>gi|89901922|ref|YP_524393.1| MotA/TolQ/ExbB proton channel [Rhodoferax ferrireducens T118]
gi|89346659|gb|ABD70862.1| MotA/TolQ/ExbB proton channel [Rhodoferax ferrireducens T118]
Length = 221
Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats.
Identities = 45/218 (20%), Positives = 87/218 (39%), Gaps = 21/218 (9%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLR----RQFREFEQLFWSGQS 68
+F++ G I L SIL+ +++I++ V+ T++ + E + +
Sbjct: 12 LFSIIQAAGWP----IWPLVACSILALALVIERFVSLKTIKIAPPQLLDEVLTITRTVVP 67
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
V L N L + S + P +D + M+ +
Sbjct: 68 TPDVVNQLAQ--NSALGEVLASGLRALN-------SHPRCSEDELRSTMESTGRLVAHRL 118
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA----GYYSNNVVSIPGIIESLISILL 184
+ L+ L +++SA L+G+ G V+GM+ F S + N GI +L +
Sbjct: 119 EKYLNALATIASAAPLMGLFGTVVGMIEIFGSQSTPGGATGGNPAQLAHGISIALYNTAF 178
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
GL V+IPS I + F ++ + +E + + L+
Sbjct: 179 GLIVAIPSLIFWRYFRARVDEYLLTLELASERLARHLN 216
>gi|315186359|gb|EFU20119.1| MotA/TolQ/ExbB proton channel [Spirochaeta thermophila DSM 6578]
Length = 208
Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats.
Identities = 44/216 (20%), Positives = 95/216 (43%), Gaps = 23/216 (10%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLR----RQFREFEQLFWSGQS 68
+ + ++ G + II + I + +++I++ + F +R + FR + G
Sbjct: 1 MLNVLIKGGPVLWAII---LLAFIGT-AIVIERILYFRKIRVDEEKLFRRIKSSLEKGHF 56
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
E + + + + L+ + + P IQ ++ A +E+ +
Sbjct: 57 DEALY--ICDTNYSPLSVLIKVGIE--------HRDHPEHIQ---REVIKDAANQEVPRL 103
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA--GYYSNNVVSIPGIIESLISILLGL 186
+ LS LG+++ L+G+LG V G M F + G ++ + GI E+LI+ + G+
Sbjct: 104 EKNLSGLGTIAHIAPLLGLLGTVTGTMKTFGVLGQFGAVTDPGILATGISEALITTVAGI 163
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
V++P+ I YN + ++ME N +++
Sbjct: 164 LVAVPAVIFYNYLVTKVNLLLIKMENQVNSLILMIN 199
>gi|91776444|ref|YP_546200.1| MotA/TolQ/ExbB proton channel [Methylobacillus flagellatus KT]
gi|91710431|gb|ABE50359.1| MotA/TolQ/ExbB proton channel [Methylobacillus flagellatus KT]
Length = 204
Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats.
Identities = 39/218 (17%), Positives = 90/218 (41%), Gaps = 19/218 (8%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITL----RRQFREFEQLFWSGQS 68
++ + G I L SI++ ++II++ + + E + G++
Sbjct: 1 MWEIIKAAGWP----IWPLIFASIVAVAIIIERLLALREQQIVPKALLPEVQNWLSQGRA 56
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
T + + L +F SA+ + ++ + ++ + ++
Sbjct: 57 GVTAEALARLEKHSMLGTVFASALK-----------NLGAPREVMKEAVEESGRAVAHKL 105
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCV 188
+ L+ LG++++ L+G+LG V+GM+ F + + GI +L + G+ V
Sbjct: 106 EKYLTTLGTIATVAPLLGLLGTVIGMVELFGAFTATGHDVAQFARGISVALYNTAGGIVV 165
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
++P+ I Y F F ++ME A + I+ + +
Sbjct: 166 AVPAMIFYRHFRGKIDGFIVEMEQEAVKLVEIIHGERK 203
>gi|313159658|gb|EFR59016.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Alistipes sp. HGB5]
Length = 223
Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats.
Identities = 35/220 (15%), Positives = 83/220 (37%), Gaps = 19/220 (8%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+ ++ LF + G + L ++ + +++ + F S
Sbjct: 18 MGLWTLFTKGGWL----MWPLLALGGVTIFIFVERFMAIRKASVLDMNFMNRIRDYISDG 73
Query: 71 TVCKS--LKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ + L + +A + + + + ++ E+ ++
Sbjct: 74 KIQTAVNLCKKTDTPIARMIEKGIERIGRPMSD-----------VQTAIENVANLEVSKL 122
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN--VVSIPGIIESLISILLGL 186
L FL +++ ++G LG VLGM+ F ++ + G+ ++++ ++GL
Sbjct: 123 ENGLPFLATIAGGAPMIGFLGTVLGMVQTFMDMSAAGGTVDLGLLSSGMYVAMVTTVMGL 182
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
V IP+ YN + +K QME + F IL++ +
Sbjct: 183 IVGIPAYFGYNYLVARIEKLVFQMEANSIAFMDILNQPVQ 222
>gi|15835499|ref|NP_297258.1| MotA/TolQ/ExbB proton channel family protein [Chlamydia muridarum
Nigg]
gi|270285682|ref|ZP_06195076.1| MotA/TolQ/ExbB proton channel family protein [Chlamydia muridarum
Nigg]
gi|270289690|ref|ZP_06195992.1| MotA/TolQ/ExbB proton channel family protein [Chlamydia muridarum
Weiss]
gi|301337077|ref|ZP_07225279.1| MotA/TolQ/ExbB proton channel family protein [Chlamydia muridarum
MopnTet14]
gi|8163340|gb|AAF73612.1| MotA/TolQ/ExbB proton channel family protein [Chlamydia muridarum
Nigg]
Length = 232
Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats.
Identities = 46/222 (20%), Positives = 93/222 (41%), Gaps = 18/222 (8%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKS---VNFITLRRQFREFEQLFWSGQ-S 68
I F + L K I LF SI +W+V+ QK F+ + +EF S
Sbjct: 9 IIQSFQEADLFGKVIFFSLFALSICTWTVLHQKLTVQKKFLKSGKSLKEFLIKNRHAPLS 68
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKG-----ARSPIGIQDRIDR--MMDVAI 121
L+ + + ++ + + DK R+P+ + I + A+
Sbjct: 69 LDI------HPESTPFTDLYFTIKRGTLELLDKNRQLAPERTPLLSVEDIQSLETLFNAV 122
Query: 122 ARELEEITEKLSFL-GSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLI 180
+ + K +F+ + S +G+LG V G++ F I+ +N + + G+ +L
Sbjct: 123 MPKYRSLLNKNNFIPATTISLAPFLGLLGTVWGILLAFAHISAGQANGTIMMEGLATALG 182
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
+ ++GL V+IPS + +N + + ++++E A +
Sbjct: 183 TTIVGLFVAIPSLVGFNYLRAHASQVSLEIEQIAFLLLNSIE 224
>gi|24215020|ref|NP_712501.1| biopolymer transport protein TolQ [Leptospira interrogans serovar
Lai str. 56601]
gi|45657493|ref|YP_001579.1| biopolymer transport protein [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|24196067|gb|AAN49519.1| biopolymer transport protein TolQ [Leptospira interrogans serovar
Lai str. 56601]
gi|45600732|gb|AAS70216.1| biopolymer transport protein [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
Length = 201
Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats.
Identities = 43/193 (22%), Positives = 92/193 (47%), Gaps = 20/193 (10%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLR----RQFREFEQLFWSGQSLETVCKSLKNHHN 81
+ ++ + SI+ +++II++ + F + +R ++LF ++ T LK +
Sbjct: 17 SVPIVIVLVSIIGFTIIIERLIYFSKWKPVSQEDWRSLKELFRQ-RNWNTAIDFLKGMKS 75
Query: 82 IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSA 141
+ + + S + + + M A ++ ++ LS LG++++
Sbjct: 76 GPSILVLQAGIE-----------SSLKNLEAAEEEMLSAGFAQILKMERFLSGLGTIATI 124
Query: 142 GLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIE 201
L+G+LG VLG++ F+ +G V GI E+LI+ +GL ++IP+ +AYN F +
Sbjct: 125 SPLLGVLGTVLGIIRSFEEGSGTRGAEV----GISEALITTAMGLAIAIPAYVAYNYFQK 180
Query: 202 DSKKFAMQMEGFA 214
+ +ME +
Sbjct: 181 KKEDTIAEMENLS 193
>gi|257452703|ref|ZP_05618002.1| biopolymer transport exbB protein [Fusobacterium sp. 3_1_5R]
gi|257466564|ref|ZP_05630875.1| biopolymer transport exbB protein [Fusobacterium gonidiaformans
ATCC 25563]
gi|315917719|ref|ZP_07913959.1| biopolymer transport exbB protein [Fusobacterium gonidiaformans
ATCC 25563]
gi|317059244|ref|ZP_07923729.1| biopolymer transport exbB protein [Fusobacterium sp. 3_1_5R]
gi|313684920|gb|EFS21755.1| biopolymer transport exbB protein [Fusobacterium sp. 3_1_5R]
gi|313691594|gb|EFS28429.1| biopolymer transport exbB protein [Fusobacterium gonidiaformans
ATCC 25563]
Length = 203
Score = 113 bits (284), Expect = 2e-23, Method: Composition-based stats.
Identities = 43/204 (21%), Positives = 82/204 (40%), Gaps = 19/204 (9%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQ-----FREFEQLFWSGQSLETVCKSLKNHHNI 82
+ +F ++ I++++V F R ++ + L + E + N +
Sbjct: 11 MWFIFALGVMGLYAILERTVYFTVKERNSIANLNKKLKDLLEKNKIKEAIVYLNSNKSSS 70
Query: 83 G--LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSS 140
L AI + E K+S + ++ ++L + + + +
Sbjct: 71 ARVLQAILIYGYKENKESL-----------EALEEKGKEVAIQQLRYLERNMWLISVAAH 119
Query: 141 AGLLVGILGAVLGMMGFFQSIAGYYSNN-VVSIPGIIESLISILLGLCVSIPSSIAYNKF 199
LVG+LG V GM+ FQ++A Y + + V GI E+L + GL V+IP+ I YN +
Sbjct: 120 VAPLVGLLGTVTGMIKAFQAVALYGTGDPAVLAKGISEALYTTAGGLFVAIPAMILYNYY 179
Query: 200 IEDSKKFAMQMEGFANEFSAILSR 223
+ +E + E R
Sbjct: 180 NKKIDSIVSDIEQSSTELLNYFRR 203
>gi|294650555|ref|ZP_06727912.1| biopolymer transport protein TolQ [Acinetobacter haemolyticus ATCC
19194]
gi|292823552|gb|EFF82398.1| biopolymer transport protein TolQ [Acinetobacter haemolyticus ATCC
19194]
Length = 209
Score = 113 bits (284), Expect = 2e-23, Method: Composition-based stats.
Identities = 50/212 (23%), Positives = 100/212 (47%), Gaps = 21/212 (9%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
++ L G + L + SI + ++II++ +I L+R + L G +E V
Sbjct: 1 MWELVKAGGWL----MLPLILSSIFTVAIIIER---YIRLKRSQVLPQALLVKGADVENV 53
Query: 73 CKSLKNHH--NIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
+L+ + L I + + ++ AR+ M+ + E+ + +
Sbjct: 54 VLTLEQPEINHSALGRILKAGYD-HQDQGEQFARAQ----------MEATASEEITHLEK 102
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSI-AGYYSNNVVSIPGIIESLISILLGLCVS 189
++FLG++ + L+G+LG VLG++ F + G N + +PGI +LI+ +G+ ++
Sbjct: 103 NINFLGTLGAIAPLLGLLGTVLGIIEAFLVVDVGSAGNASMMMPGISTALITTAVGMLIA 162
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
IP+ IAY F ++ ++E + F A L
Sbjct: 163 IPAMIAYRYFQRVVHEYVAELEQQSTLFHAAL 194
>gi|297537853|ref|YP_003673622.1| MotA/TolQ/ExbB proton channel [Methylotenera sp. 301]
gi|297257200|gb|ADI29045.1| MotA/TolQ/ExbB proton channel [Methylotenera sp. 301]
Length = 201
Score = 113 bits (284), Expect = 2e-23, Method: Composition-based stats.
Identities = 43/218 (19%), Positives = 87/218 (39%), Gaps = 21/218 (9%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLR----RQFREFEQLFWSGQS 68
++ + + G I L I S+++ ++I +++ E + G
Sbjct: 1 MWQIILAAGWP----IWPLIIASVVALAIIGERAFALRESTVAPPNLLPEVQAWLNKGGV 56
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ L+ H +G +F SA+S K S + ++ +
Sbjct: 57 TKETISRLEQHSLLG--QVFASALSNAKNSR-----------EITKEAIEETGRAVAHSL 103
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCV 188
+ LS LG++++ L+G+LG V+GM+ F + + GI +L + G+ V
Sbjct: 104 EKYLSTLGTIATVAPLLGLLGTVIGMVELFGAFTSTGHDIAQFARGISVALYNTAAGIVV 163
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
++P+ IAY F + ME A + I+ + +
Sbjct: 164 AVPAMIAYRYFRSKVDDLLVGMEQQAIKLVEIIHGERK 201
>gi|332291240|ref|YP_004429849.1| MotA/TolQ/ExbB proton channel [Krokinobacter diaphorus 4H-3-7-5]
gi|332169326|gb|AEE18581.1| MotA/TolQ/ExbB proton channel [Krokinobacter diaphorus 4H-3-7-5]
Length = 234
Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats.
Identities = 45/218 (20%), Positives = 88/218 (40%), Gaps = 13/218 (5%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+SI L + G A II +LF+ ++ + ++ + F
Sbjct: 27 LSIIDLLITGGTAGIIIIAVLFVLLFVAIYIYFERLFAIKAASKVDSNFMNQIRDNV--- 83
Query: 71 TVCKSLKNHHNIGLAAIFMS-AMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
NI A I+ + A S + KG + I+ ++ E+ ++
Sbjct: 84 -------QSGNIEGAKIYCAQANSPVSRLTAKGISRIGSPLEDINTAIENQGKLEVYKLE 136
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGY--YSNNVVSIPGIIESLISILLGLC 187
+S L +++ A ++G LG V+GM+ F ++A + GI ++ + + GL
Sbjct: 137 RNVSVLATIAGAAPMIGFLGTVIGMVLAFHTLATSSGQAEMGTLAEGIYTAMTTTVAGLI 196
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
V I + + YN + + K ME A +F +L+ +
Sbjct: 197 VGIIAYMGYNHLVVRTDKVVHSMEANAVDFLDLLNEPS 234
>gi|220932018|ref|YP_002508926.1| MotA/TolQ/ExbB proton channel [Halothermothrix orenii H 168]
gi|219993328|gb|ACL69931.1| MotA/TolQ/ExbB proton channel [Halothermothrix orenii H 168]
Length = 216
Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats.
Identities = 48/206 (23%), Positives = 89/206 (43%), Gaps = 19/206 (9%)
Query: 29 TLLFIFSILSWSVIIQKSVNFITLR----RQFREFEQLFWSGQSLETVCKSLKNHHNIGL 84
L I SI +VI++K + F R R ++ E L G L T LK
Sbjct: 18 IPLIIASIFGVAVILEKLIFFARYRDNSFRLIKKIELLVEEGDIL-TALNELKGERG-PN 75
Query: 85 AAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLL 144
A + +A++ + RI ++ E++++ + L L +++ L
Sbjct: 76 AKLLSTALAHHSEEPG-----------RIKEVLQAVGEDEIKKMEKHLPILDVIATVSPL 124
Query: 145 VGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIED 202
+G+LG V+G++ F + A +N GI E+LIS LGL ++IP+++ Y+ F
Sbjct: 125 LGLLGTVMGIISSFNIMGAAAGAANPHQISAGIAEALISTALGLIIAIPTAVFYSYFANK 184
Query: 203 SKKFAMQMEGFANEFSAILSRQTEGN 228
+ A +M + ++ +
Sbjct: 185 VENKAHEMNLSMIDILEVVGNNRRED 210
>gi|257469999|ref|ZP_05634091.1| biopolymer transport exbB protein [Fusobacterium ulcerans ATCC
49185]
gi|317064225|ref|ZP_07928710.1| ligand gated channel protein TolQ [Fusobacterium ulcerans ATCC
49185]
gi|313689901|gb|EFS26736.1| ligand gated channel protein TolQ [Fusobacterium ulcerans ATCC
49185]
Length = 206
Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats.
Identities = 40/201 (19%), Positives = 91/201 (45%), Gaps = 15/201 (7%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFIT----LRRQFREFEQLFWSGQSLETVCKSLKNHHNIG 83
+ +LFI S++S +VII++ F + R FR+ L S + + + + N
Sbjct: 12 MWILFILSLISTTVIIERLFFFFKKEKTMNRNFRKEVILAVSNRDMCRIIEICDKERNSV 71
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRI--DRMMDVAIARELEEITEKLSFLGSMSSA 141
+ KK + ++D D+++ E+ + ++L LG ++
Sbjct: 72 GCTV--------KKFLCRCNICDTNLKDFHQFDQIIKEIEMDEISPLEKRLHILGIIAHV 123
Query: 142 GLLVGILGAVLGMMGFFQSIAGYYSNN-VVSIPGIIESLISILLGLCVSIPSSIAYNKFI 200
++G+LG V GM+ F+ ++ + + + + I ++LI+ GL ++IP+ + YN
Sbjct: 124 APMLGLLGTVTGMIDAFKDLSKFGAGDPTIVADSISKALITTAAGLSIAIPALVVYNLLN 183
Query: 201 EDSKKFAMQMEGFANEFSAIL 221
+ ++ +++ I+
Sbjct: 184 KRIEEIEEEIDKITTNVINIV 204
>gi|257464098|ref|ZP_05628482.1| biopolymer transport exbB protein [Fusobacterium sp. D12]
gi|317061617|ref|ZP_07926102.1| biopolymer transport exbB protein [Fusobacterium sp. D12]
gi|313687293|gb|EFS24128.1| biopolymer transport exbB protein [Fusobacterium sp. D12]
Length = 202
Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats.
Identities = 44/203 (21%), Positives = 89/203 (43%), Gaps = 17/203 (8%)
Query: 27 IITLLFIFSILSWSVIIQKSVNFITLRRQF-----REFEQLFWSGQSLETVCKSLKNHHN 81
I+ +LF SI + ++I+++ V F ++ + L G+ +E + ++
Sbjct: 11 ILWVLFFMSIGALAIILERVVFFTRTEKKVDVDFKKNINDLISQGK-VEEAIQLCESKKG 69
Query: 82 IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSA 141
+I + K KG +QD + ++ + + + LS L ++ S
Sbjct: 70 SVAGSI-----RTFLKRAKKG----QDVQDY-ESIIKEIMLESMTPLDRGLSSLEAIGSL 119
Query: 142 GLLVGILGAVLGMMGFFQSIAGYYSNN-VVSIPGIIESLISILLGLCVSIPSSIAYNKFI 200
+ G+LG V GM+ F +I+ + + + GI E+L++ GL V+IP AYN F
Sbjct: 120 APMCGLLGTVTGMIKAFINISKMGAGDPTIVADGISEALVTTAAGLYVAIPVIAAYNIFS 179
Query: 201 EDSKKFAMQMEGFANEFSAILSR 223
+ + + +++ I R
Sbjct: 180 KIAARREDEVDKIVANIINIFRR 202
>gi|332283947|ref|YP_004415858.1| biopolymer transport protein [Pusillimonas sp. T7-7]
gi|330427900|gb|AEC19234.1| biopolymer transport protein [Pusillimonas sp. T7-7]
Length = 202
Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats.
Identities = 36/214 (16%), Positives = 85/214 (39%), Gaps = 13/214 (6%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
+ + G I LL S+L ++II++ ++ + +L + + E V
Sbjct: 1 MLEIIHAAGWP----IWLLVATSVLGLALIIERFMSLRS---------KLVFPPRLPEQV 47
Query: 73 CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKL 132
+ L+ H+ A + ++ S + + + D ++ + L
Sbjct: 48 LELLRQKHSSPDAILRIAGHSPLGRVLAEVMINRDETHDYRVAAIEDVGKDVAHNLNRYL 107
Query: 133 SFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPS 192
L +++ L+G+ G V+GM+ F S + GI +L + G+ ++IP+
Sbjct: 108 PALATIAVVAPLMGLFGTVVGMIEIFASYTPAGGDPSQLARGISIALYNTGFGIIIAIPA 167
Query: 193 SIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
I + + + ++E A+ + ++ R +
Sbjct: 168 LIFHRYYRSRVDHYLHKLEREASALNRMIERGAQ 201
>gi|322419085|ref|YP_004198308.1| MotA/TolQ/ExbB proton channel [Geobacter sp. M18]
gi|320125472|gb|ADW13032.1| MotA/TolQ/ExbB proton channel [Geobacter sp. M18]
Length = 598
Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats.
Identities = 41/196 (20%), Positives = 77/196 (39%), Gaps = 11/196 (5%)
Query: 29 TLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIF 88
+L + S+ V ++K + RR+ + F + F S + + L I+
Sbjct: 395 AMLIMASL----VFVRKFGYLLKNRRRNQAFLESFNSLHDPLDLDADKDDLEESSLLRIY 450
Query: 89 MSAMSEWKKSCD-KGARSPIGIQDRI-----DRMMDVAIARELEEITEKLSFLGSMSSAG 142
+ + + + + + R ++ A + E ++ + L S G
Sbjct: 451 RAGHEQIHHWAEKQNVKDEEVVVTRSGLSIFRAALERASSEETAKVNAGMIVLTLGISGG 510
Query: 143 LLVGILGAVLGMMGFFQSIAGYYSNNVVS-IPGIIESLISILLGLCVSIPSSIAYNKFIE 201
G+LG V G+M F S+A N+ + PG+ +L L GL V+IP+ AY+
Sbjct: 511 PFWGLLGTVWGVMNTFASLAEAGEANLSAIAPGVASALACTLFGLLVAIPALFAYSFLGV 570
Query: 202 DSKKFAMQMEGFANEF 217
K + F E+
Sbjct: 571 QIKHLNNETHHFIEEY 586
>gi|326561377|gb|EGE11733.1| motA/TolQ/ExbB proton channel [Moraxella catarrhalis 46P47B1]
Length = 182
Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats.
Identities = 42/212 (19%), Positives = 77/212 (36%), Gaps = 35/212 (16%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
MD + + K + +L S++SW V I + +N RR+ S +
Sbjct: 1 MDFGFY--WSHTDAVSKTLFFVLLALSMISWVVGIMRVIN---SRRRTANIVDELTSQIN 55
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
++ + G + ++ + IA E+
Sbjct: 56 IQNL-----------------------------GDLPFDQRKMATEQKLLQQIALHRYEL 86
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLC 187
+ L LG+ +S +G+ G V G+ SI + + G + E+LI LGL
Sbjct: 87 EKGLPVLGTTASIAPFIGLFGTVWGIFHALHSIGATGQAGLAQVAGPVGEALIMTGLGLA 146
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
V+IP+ I YN +K+ A++ +
Sbjct: 147 VAIPAVIFYNIATRINKQAIHLATDTAHQILS 178
>gi|269119207|ref|YP_003307384.1| MotA/TolQ/ExbB proton channel [Sebaldella termitidis ATCC 33386]
gi|268613085|gb|ACZ07453.1| MotA/TolQ/ExbB proton channel [Sebaldella termitidis ATCC 33386]
Length = 235
Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats.
Identities = 33/211 (15%), Positives = 87/211 (41%), Gaps = 11/211 (5%)
Query: 22 LAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQF-REFEQ---LFWSGQSLETVCKSLK 77
+ + + + + +V+++K+ F+ + +F++ + + +
Sbjct: 8 IVGGIFMWPILMALVCGMAVLLEKTWYFLKNEKDMTDKFKKNLIKLIQNGNKKEIIDFCS 67
Query: 78 NHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGS 137
N +A + + +++ + G P +++ + ++ + + + L
Sbjct: 68 TKKNS-VAKTIKNTLETFEE-DEGGDFDPRYLEE----IAKETTLEQITRLEKGMWLLNI 121
Query: 138 MSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-VVSIPGIIESLISILLGLCVSIPSSIAY 196
+++ +G+LG V GM+ F+ ++G + + GI E+L + GL V IP+ IAY
Sbjct: 122 VATVSPQLGLLGTVTGMIMAFKGLSGAGGADSTIIAAGISEALYTTAFGLIVGIPALIAY 181
Query: 197 NKFIEDSKKFAMQMEGFANEFSAILSRQTEG 227
N F +++E + + + G
Sbjct: 182 NFFDRRIDSVLIEVERMTVYLTNSMQNKNNG 212
>gi|291287517|ref|YP_003504333.1| MotA/TolQ/ExbB proton channel [Denitrovibrio acetiphilus DSM 12809]
gi|290884677|gb|ADD68377.1| MotA/TolQ/ExbB proton channel [Denitrovibrio acetiphilus DSM 12809]
Length = 459
Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats.
Identities = 43/213 (20%), Positives = 87/213 (40%), Gaps = 17/213 (7%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLET 71
S + G+ V I+ + I I +I++++ ++ SG+ ++
Sbjct: 252 SFLSTIKAGGILVYPILGVGLIALI----LILERAFVLSRIKST---------SGKRMDM 298
Query: 72 VCKSLKNHHNIGLAAIFMSAMSEWK--KSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+ + + G F + S + + Q+ I+ M AI REL +
Sbjct: 299 IMEFAERSDWEGCDK-FCAENSAFPTCRILKSTMGYIGETQEVIENAMQEAILRELPRME 357
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCV 188
L L +++ L+G+LG V GM+ F + + + + + GI E+L++ LGL V
Sbjct: 358 RFLPTLNILAAVAPLLGLLGTVTGMINTFNILTIFGTGDPRMMSGGISEALVTTQLGLAV 417
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+IP + ++ + +E F+ L
Sbjct: 418 AIPVMLFHHMLERRVDRILNDIEEKGTRFAVAL 450
>gi|326317449|ref|YP_004235121.1| MotA/TolQ/ExbB proton channel [Acidovorax avenae subsp. avenae ATCC
19860]
gi|323374285|gb|ADX46554.1| MotA/TolQ/ExbB proton channel [Acidovorax avenae subsp. avenae ATCC
19860]
Length = 208
Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats.
Identities = 44/218 (20%), Positives = 83/218 (38%), Gaps = 20/218 (9%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLR----RQFREFEQLFWSGQS 68
+ ++ G I L SIL+ ++++++ V T + + E + G
Sbjct: 1 MLSIIQAAGWP----IWPLIACSILALALVVERFVALKTAKVAPPKLLDEAISVSSRGLP 56
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
V L N L + S + + R + + +
Sbjct: 57 TPDVVNQLSQ--NSALGEVLASGLRTLNSHPQSSEADVRAAMEGTGRAI-------AQRL 107
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYS---NNVVSIPGIIESLISILLG 185
+ L+ L +++SA L+G+LG V+GM+ F S + N GI +L + G
Sbjct: 108 EKYLNALATIASAAPLLGLLGTVIGMIEIFGSQGSSATGQGNPAQLAHGISIALYNTAFG 167
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
L V+IP+ I + F + + +E + +F L R
Sbjct: 168 LIVAIPTLIFWRYFRSRVDAYLLTLELASEQFVRHLLR 205
>gi|228469866|ref|ZP_04054805.1| MotA/TolQ/ExbB proton channel family protein [Porphyromonas uenonis
60-3]
gi|228308501|gb|EEK17289.1| MotA/TolQ/ExbB proton channel family protein [Porphyromonas uenonis
60-3]
Length = 224
Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats.
Identities = 38/219 (17%), Positives = 90/219 (41%), Gaps = 23/219 (10%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+S++ L G I+ +L + S+++ V + K + + R +
Sbjct: 22 MSLWELACAGGW----IMIVLLLLSLVAIYVFVAKYIELRKVNRPD-------------D 64
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSE----WKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
++ +K++ +G ++ E +KG + + ++ + E+
Sbjct: 65 SLIARIKDYLQMGRKDSAIALCKEKNTPEAHMIEKGLKRLGQPASEVLPAIENVGSYEVG 124
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI--PGIIESLISILL 184
+ L L ++++ ++G LG V GM+ F +A VS+ GI ++L++ +
Sbjct: 125 RLERGLPLLATIAAGAPMIGFLGTVTGMVQAFFDLANAPGGIDVSLLSSGIYQALVTTVG 184
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
GL V I + YN + + ++E +F +++
Sbjct: 185 GLIVGIVTLFLYNYLVGQINRIVNRLEANTLDFMDVINE 223
>gi|183219574|ref|YP_001837570.1| biopolymer transport ExbB protein [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
gi|189909715|ref|YP_001961270.1| TolQ-like protein [Leptospira biflexa serovar Patoc strain 'Patoc 1
(Ames)']
gi|106879722|emb|CAJ90430.1| biopolymer transport ExbB protein [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
gi|167774391|gb|ABZ92692.1| Transport protein, TolQ-like protein [Leptospira biflexa serovar
Patoc strain 'Patoc 1 (Ames)']
gi|167777996|gb|ABZ96294.1| Biopolymer transport ExbB protein; putative membrane protein
[Leptospira biflexa serovar Patoc strain 'Patoc 1
(Paris)']
Length = 279
Score = 112 bits (282), Expect = 3e-23, Method: Composition-based stats.
Identities = 50/210 (23%), Positives = 87/210 (41%), Gaps = 19/210 (9%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS- 68
+I + LF+ G + L + SI+ + VI+++ F T + + + Q
Sbjct: 70 EIGLVKLFVTGGW----SMWPLLLASIVGFGVILERMYFFFTAKLVRKGYNQDLQDAIDA 125
Query: 69 --LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
++ V + LK + + + + M + P I+R +
Sbjct: 126 SGMQGVDEFLKANEGQRITDVLKNGM-------EVSQNDPEIFAAGIER----EAGEVMT 174
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLG 185
+ + L+ L ++S+ LVG LG V GM+ F +IA N V GI E+LI+ G
Sbjct: 175 LLEKGLTVLSAVSTIAPLVGFLGTVSGMINAFDAIANADQVNAKVVAGGIKEALITTAAG 234
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFAN 215
L V+IP+ Y F ++E AN
Sbjct: 235 LIVAIPAMTFYQYLQGRVGFFTSEVEEAAN 264
>gi|294784540|ref|ZP_06749829.1| biopolymer transport ExbB protein [Fusobacterium sp. 3_1_27]
gi|294487756|gb|EFG35115.1| biopolymer transport ExbB protein [Fusobacterium sp. 3_1_27]
Length = 193
Score = 112 bits (282), Expect = 3e-23, Method: Composition-based stats.
Identities = 46/200 (23%), Positives = 80/200 (40%), Gaps = 19/200 (9%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQF-----REFEQLFWSGQSLETVCKSLKNHHNI 82
+ + + I+ I+++ F+ R + QL G+ E + N +
Sbjct: 1 MYFILLMGIIGLYAILERFSYFLIKERNNFSRLPSDVRQLINEGKIKEAIVALNSNKSST 60
Query: 83 G--LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSS 140
L I + E K++ A G + I+R ++ + + L +++
Sbjct: 61 SVVLKEILIYGYKENKETL--SALEEKGKEKAIER---------IKSLERNMWLLSLVAN 109
Query: 141 AGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKF 199
A L+G+LG V GM+ F SIA + + V GI E+L + GL V+IP I YN F
Sbjct: 110 ASPLLGLLGTVTGMIKAFNSIALNGTGDAGVLAKGISEALYTTAGGLIVAIPCMIFYNYF 169
Query: 200 IEDSKKFAMQMEGFANEFSA 219
+ +E E
Sbjct: 170 NKKIDLVVSDIEKTCTELLN 189
>gi|260494914|ref|ZP_05815043.1| biopolymer transport exbB protein [Fusobacterium sp. 3_1_33]
gi|260197357|gb|EEW94875.1| biopolymer transport exbB protein [Fusobacterium sp. 3_1_33]
Length = 203
Score = 112 bits (282), Expect = 3e-23, Method: Composition-based stats.
Identities = 46/204 (22%), Positives = 81/204 (39%), Gaps = 19/204 (9%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQF-----REFEQLFWSGQSLETVCKSLKNHHNI 82
+ + + I+ I+++ F+ R E +QL G+ E + N +
Sbjct: 11 MYFILLMGIIGLYAILERFSYFLIKERNNFSKLPSEVKQLINEGKIKEAIVALNSNKSST 70
Query: 83 GLA--AIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSS 140
L I + E K++ + G + I+R ++ + + L +++
Sbjct: 71 SLVLKEILIYGYKENKETL--SSLEEKGKEKAIER---------IKSLERNMWLLSLVAN 119
Query: 141 AGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKF 199
A L+G+LG V GM+ F SIA + + V GI E+L + GL V+IP I YN F
Sbjct: 120 ASPLLGLLGTVTGMIKAFNSIALNGTGDAGVLAKGISEALYTTAGGLIVAIPCMIFYNYF 179
Query: 200 IEDSKKFAMQMEGFANEFSAILSR 223
+ +E E
Sbjct: 180 NKKIDLIVSDIEKTCTELLNYFRE 203
>gi|317051707|ref|YP_004112823.1| MotA/TolQ/ExbB proton channel [Desulfurispirillum indicum S5]
gi|316946791|gb|ADU66267.1| MotA/TolQ/ExbB proton channel [Desulfurispirillum indicum S5]
Length = 199
Score = 112 bits (281), Expect = 3e-23, Method: Composition-based stats.
Identities = 46/199 (23%), Positives = 92/199 (46%), Gaps = 19/199 (9%)
Query: 27 IITLLFIFSILSWSVIIQKSVNFIT---LRRQFREFEQLFWSGQSLETVCKSLKNHHNIG 83
I+T +F+FS+LS ++I++K++ + Q + + +++ K HN
Sbjct: 16 IMTPIFLFSVLSVAIILEKAITLRASVVINPQLVAKVKRSLASGNIDDAAKFCAE-HNTP 74
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
+ I ++ + G + +R++D L + L+ LG++++
Sbjct: 75 MTRIILAGLE-------------SGGEQARNRILDAGKLEAL-RLERYLTTLGTIANISP 120
Query: 144 LVGILGAVLGMMGFFQSIAGYYSN-NVVSIPGIIESLISILLGLCVSIPSSIAYNKFIED 202
L G+LG V GM+ F +I + GI E+L++ GL V+IP+ A+N F
Sbjct: 121 LFGLLGTVSGMIKVFFTIQQQGLGHSQAMAGGISEALMTTAFGLIVAIPALAAHNYFEAK 180
Query: 203 SKKFAMQMEGFANEFSAIL 221
++ ME A++ + +L
Sbjct: 181 AQNLVTHMEKHASDIAGML 199
>gi|86131527|ref|ZP_01050125.1| MotA/TolQ/ExbB proton channel family protein [Dokdonia donghaensis
MED134]
gi|85817972|gb|EAQ39140.1| MotA/TolQ/ExbB proton channel family protein [Dokdonia donghaensis
MED134]
Length = 234
Score = 112 bits (281), Expect = 3e-23, Method: Composition-based stats.
Identities = 45/218 (20%), Positives = 88/218 (40%), Gaps = 13/218 (5%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+SI L + G A II +LF+ ++ + ++ + F
Sbjct: 27 LSIIDLLLTGGTAGIIIIAVLFVLLFVAIYIYFERLFAIKAASKVDGNFMNQIRDNV--- 83
Query: 71 TVCKSLKNHHNIGLAAIFMS-AMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
NI A I+ + A S + KG + I+ ++ E+ ++
Sbjct: 84 -------ASGNIEGAKIYCAQANSPVSRLTAKGISRIGSPLEDINTAIENQGKLEVYKLE 136
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGY--YSNNVVSIPGIIESLISILLGLC 187
+S L +++ A ++G LG V+GM+ F ++A + GI ++ + + GL
Sbjct: 137 RNVSVLATIAGAAPMIGFLGTVIGMVLAFHTLATSSGQAEMGTLAEGIYTAMTTTVAGLI 196
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
V I + + YN + + K ME A +F +L+ +
Sbjct: 197 VGIIAYMGYNHLVVRTDKVVHSMEANAVDFLDLLNEPS 234
>gi|126662332|ref|ZP_01733331.1| putative biopolymer transport protein [Flavobacteria bacterium
BAL38]
gi|126625711|gb|EAZ96400.1| putative biopolymer transport protein [Flavobacteria bacterium
BAL38]
Length = 234
Score = 112 bits (281), Expect = 3e-23, Method: Composition-based stats.
Identities = 50/221 (22%), Positives = 92/221 (41%), Gaps = 19/221 (8%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFW----SG 66
+SI++L G+ + I+ +LF + + ++ + + F +G
Sbjct: 27 LSIWSLLTSGGIGGQVIMIVLFTLLFAALFLYFERLMAINKASKIDASFMNNIKINIMAG 86
Query: 67 QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
+ K L N +A + +KG + I+ ++ A EL
Sbjct: 87 KI--DGAKMLCAQTNSPVA-----------RLIEKGISRIGKPLEDINTAIENAGNLELY 133
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV--SIPGIIESLISILL 184
++ + S L ++S AG +VG LG VLGM+ F +A V GI ++ + ++
Sbjct: 134 KLEKNTSMLATISGAGPMVGFLGTVLGMILAFHKMASGGGQIEVGALAEGIYTAMTTTVV 193
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
GL V I + + YN + + K QME A +F +L+
Sbjct: 194 GLVVGIIAYVGYNHLVVKTNKVVNQMEANAVDFLDLLNEPV 234
>gi|326798993|ref|YP_004316812.1| MotA/TolQ/ExbB proton channel [Sphingobacterium sp. 21]
gi|326549757|gb|ADZ78142.1| MotA/TolQ/ExbB proton channel [Sphingobacterium sp. 21]
Length = 277
Score = 112 bits (281), Expect = 3e-23, Method: Composition-based stats.
Identities = 41/204 (20%), Positives = 82/204 (40%), Gaps = 11/204 (5%)
Query: 14 FALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITL--RRQFREFE---QLFWSGQS 68
FA+ + G V ++ L + I+ ++ + F Q F S +
Sbjct: 64 FAMVYKAGYIVP-VLLGLLLMVIV---FSFERFFVISRAAGKGNVDTFVSKVQGFLSAGN 119
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
++ +A + S + ++K++ I + ++ A A E+ +
Sbjct: 120 IDAAIAECDKQQGS-VANVIKSGLYKYKEASVDTTLDTEHSVLAIQKEIEEATALEMPML 178
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-VVSIPGIIESLISILLGLC 187
+ L+ + ++ S G L G+LG V GM+ F ++A + + GI E+LI+ G+
Sbjct: 179 EKNLTVIATLVSIGTLTGLLGTVTGMIKAFAALATGGAPDQAQLANGISEALINTATGIF 238
Query: 188 VSIPSSIAYNKFIEDSKKFAMQME 211
S + I YN F K ++
Sbjct: 239 TSTIAVIMYNVFTSKIDKLTYSID 262
>gi|170738847|ref|YP_001767502.1| MotA/TolQ/ExbB proton channel [Methylobacterium sp. 4-46]
gi|168193121|gb|ACA15068.1| MotA/TolQ/ExbB proton channel [Methylobacterium sp. 4-46]
Length = 211
Score = 112 bits (281), Expect = 3e-23, Method: Composition-based stats.
Identities = 53/212 (25%), Positives = 86/212 (40%), Gaps = 19/212 (8%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
S A+F Q GLA + +I L S W +I++ LRR R E+ +
Sbjct: 6 FSPSAMFFQAGLAGRAVILTLVASSAWCWVLILESLYTTAKLRRSLRGLER-----GEVP 60
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
+ + + A + SP +Q R M+ A AR +
Sbjct: 61 DLLRPVVEAGRQAAALVL-------------PEESPGEVQRRTAAAMERAAARAMTATEG 107
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVS 189
S L ++S VG+LG V G+M F SIA ++ V PGI E+L + +GL +
Sbjct: 108 GYSHLAVIASVAPFVGLLGTVWGIMNSFISIADAKDTSLAVVAPGIAEALATTAIGLIAA 167
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
IP+++A+ + + + M + L
Sbjct: 168 IPAAVAHGRLGAVLGRLSQHMGHLIEALAVDL 199
>gi|163783488|ref|ZP_02178479.1| hypothetical protein HG1285_08744 [Hydrogenivirga sp. 128-5-R1-1]
gi|159881252|gb|EDP74765.1| hypothetical protein HG1285_08744 [Hydrogenivirga sp. 128-5-R1-1]
Length = 208
Score = 112 bits (281), Expect = 3e-23, Method: Composition-based stats.
Identities = 43/215 (20%), Positives = 89/215 (41%), Gaps = 19/215 (8%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRR---QFREFEQLFWSGQSL 69
I L + G+ ++ L I S++SW II++ +N +L +
Sbjct: 8 ILELIRKGGI----VMYPLIILSVISWVYIIERVINL-RANLFLPSNLNEVKLLLQKMDV 62
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+ K L + + + +A+ E+ K K + + +M+ ++ + +
Sbjct: 63 DGAYKVLSLNRDT-FSRALRAALEEYLKGNRKKSD--------LSLLMERELSSVVPAVE 113
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV--SIPGIIESLISILLGLC 187
+ L L +++S L+G+ G + G++ F + A + + GI E+L + GL
Sbjct: 114 KNLMLLSAIASIAPLLGLFGTITGLIKVFSAYASVQTEEALRLLASGIGEALTAAATGLI 173
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
V+IP+ AY F ++E A + +L
Sbjct: 174 VAIPALFAYWVFRNLGNDIIEKVEKEARDVLDLLE 208
>gi|160899009|ref|YP_001564591.1| MotA/TolQ/ExbB proton channel [Delftia acidovorans SPH-1]
gi|160364593|gb|ABX36206.1| MotA/TolQ/ExbB proton channel [Delftia acidovorans SPH-1]
Length = 210
Score = 112 bits (281), Expect = 4e-23, Method: Composition-based stats.
Identities = 49/219 (22%), Positives = 88/219 (40%), Gaps = 21/219 (9%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLR----RQFREFEQLFWSGQS 68
+ ++ G I L SIL+ +++ ++ V T R E + G
Sbjct: 1 MLSIIQAAGWP----IWPLIACSILALALVFERFVALKTARVAPPALLGEAISVSSRGLP 56
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ V + L + +G + S + + P ++ + M+ A +
Sbjct: 57 SQEVVQQLSQNSTLG--EVLASGLRALQ-------AHPDSSEEELRASMEGAGRAAAHTL 107
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGY----YSNNVVSIPGIIESLISILL 184
+ LS L +++SA L+G+LG V+GM+ F S G N GI +L +
Sbjct: 108 EKHLSALATIASAAPLLGLLGTVIGMIEIFGSQGGASATGGGNPAQLAAGISIALYNTAF 167
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
GL V+IP+ I + F + + ME + +F L R
Sbjct: 168 GLIVAIPALIFWRYFRARVDGYLLGMELASEQFVRHLVR 206
>gi|237743478|ref|ZP_04573959.1| biopolymer transport exbB protein [Fusobacterium sp. 7_1]
gi|256027037|ref|ZP_05440871.1| biopolymer transport exbB protein [Fusobacterium sp. D11]
gi|289765020|ref|ZP_06524398.1| biopolymer transport exbB protein [Fusobacterium sp. D11]
gi|229433257|gb|EEO43469.1| biopolymer transport exbB protein [Fusobacterium sp. 7_1]
gi|289716575|gb|EFD80587.1| biopolymer transport exbB protein [Fusobacterium sp. D11]
Length = 203
Score = 112 bits (281), Expect = 4e-23, Method: Composition-based stats.
Identities = 46/204 (22%), Positives = 81/204 (39%), Gaps = 19/204 (9%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQF-----REFEQLFWSGQSLETVCKSLKNHHNI 82
+ + + I+ I+++ F+ R E +QL G+ E + N +
Sbjct: 11 MYFILLMGIIGLYAILERFSYFLIKERNNFSKLPSEVKQLINEGKIKEAIVALNSNKSST 70
Query: 83 GLA--AIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSS 140
L I + E K++ + G + I+R ++ + + L +++
Sbjct: 71 SLVLKEILIYGYKENKETL--SSLEEKGKEKAIER---------IKALERNMWLLSLVAN 119
Query: 141 AGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKF 199
A L+G+LG V GM+ F SIA + + V GI E+L + GL V+IP I YN F
Sbjct: 120 ASPLLGLLGTVTGMIKAFNSIALNGTGDAGVLAKGISEALYTTAGGLIVAIPCMIFYNYF 179
Query: 200 IEDSKKFAMQMEGFANEFSAILSR 223
+ +E E
Sbjct: 180 NKKIDLIVSDIEKTCTELLNYFRE 203
>gi|149370018|ref|ZP_01889869.1| putative biopolymer transport protein [unidentified eubacterium
SCB49]
gi|149356509|gb|EDM45065.1| putative biopolymer transport protein [unidentified eubacterium
SCB49]
Length = 232
Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats.
Identities = 41/200 (20%), Positives = 82/200 (41%), Gaps = 17/200 (8%)
Query: 31 LFIFSILSWSVIIQKSVNFITLRRQFREFEQLFW---SGQSLETVCKSLKNHHNIGLAAI 87
L + ++ V ++ + F SG +L K L N ++
Sbjct: 45 LAVLLFVALYVYFERLFAIKAASKYDANFMNQIRDNVSGGNL-QGAKVLCAQQNSPVS-- 101
Query: 88 FMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGI 147
+ +KG + I+ ++ A E+ ++ + +S L +++ A ++G
Sbjct: 102 ---------RLTEKGISRIGSPLEDINTAIENAGRLEVYKLEKNVSVLATIAGAAPMIGF 152
Query: 148 LGAVLGMMGFFQSIAGY--YSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKK 205
LG V+GM+ F ++A + + GI ++ + + GL V I + I YN + + K
Sbjct: 153 LGTVIGMVLAFHTLATSSGQAEMGLLAEGIYTAMTTTVAGLIVGIIAYIGYNHLVVKTDK 212
Query: 206 FAMQMEGFANEFSAILSRQT 225
QME A +F +L+
Sbjct: 213 IVHQMEATAVDFLDLLNEPA 232
>gi|241765691|ref|ZP_04763640.1| MotA/TolQ/ExbB proton channel [Acidovorax delafieldii 2AN]
gi|241364439|gb|EER59547.1| MotA/TolQ/ExbB proton channel [Acidovorax delafieldii 2AN]
Length = 213
Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats.
Identities = 42/223 (18%), Positives = 81/223 (36%), Gaps = 25/223 (11%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLR----RQFREFEQLFWSGQS 68
+ ++ G I L S+L+ ++I ++ + T R + E +
Sbjct: 1 MLSIIQAAGWP----IWPLIACSVLALALIFERFLALKTARVAPPQLLDEAITVSAKAVP 56
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
V L N L + S + + + R + +
Sbjct: 57 TPDVVNQLAQ--NSALGEVLASGLRAVNNNPQCTEADLRATMEGTGRTV-------AHRL 107
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVS--------IPGIIESLI 180
+ L+ L +++SA L+G+LG V+GM+ F S G + GI +L
Sbjct: 108 EKYLNALATIASAAPLLGLLGTVIGMIEIFGSQVGTGGASQAMGGGNPAQLAHGISIALY 167
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
+ GL V+IP+ I + F + + +E + +F + R
Sbjct: 168 NTAFGLMVAIPALIFWRYFRSRVDAYLLTLELASEQFVRHILR 210
>gi|296447216|ref|ZP_06889146.1| MotA/TolQ/ExbB proton channel [Methylosinus trichosporium OB3b]
gi|296255275|gb|EFH02372.1| MotA/TolQ/ExbB proton channel [Methylosinus trichosporium OB3b]
Length = 213
Score = 112 bits (280), Expect = 5e-23, Method: Composition-based stats.
Identities = 56/225 (24%), Positives = 94/225 (41%), Gaps = 26/225 (11%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
IS +FM G K ++ +L + S+ +W +I++ V+ + +
Sbjct: 6 ISPVTMFMNAGPVGKVVMGMLILASVWTWVLIVEGVVSVVRI-----------------G 48
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
+S + GL +A E S D S ++R+ +M A L
Sbjct: 49 RAARSARAGGAAGLLGPVEAA-GEHAGSFDLPGESIGEKRERVAEIMSRAGRELLTSAEG 107
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVS 189
L L +SS VG+ G V G+M F IA ++ V PGI E+L + GL +
Sbjct: 108 GLPNLAVISSVAPFVGLFGTVWGIMTSFAGIAQSQDTSLAVVAPGIAEALAATAYGLAAA 167
Query: 190 IPSSIAYNK----FIEDSKKFAMQMEGFANEF---SAILSRQTEG 227
IP+S+ YN+ F ++ A +E A A+++R+ E
Sbjct: 168 IPASVGYNRIGAAFARAGQQVAHYVEDKALAITSGHAVVTRKREA 212
>gi|221066470|ref|ZP_03542575.1| MotA/TolQ/ExbB proton channel [Comamonas testosteroni KF-1]
gi|220711493|gb|EED66861.1| MotA/TolQ/ExbB proton channel [Comamonas testosteroni KF-1]
Length = 210
Score = 112 bits (280), Expect = 5e-23, Method: Composition-based stats.
Identities = 45/214 (21%), Positives = 87/214 (40%), Gaps = 12/214 (5%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
+ ++ G I L SIL+ ++I ++ + + S +
Sbjct: 1 MLSIIQAAGWP----IWPLIACSILALALIFERFASLKASKVAPANLLNEAISVSTKN-- 54
Query: 73 CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKL 132
S + + +++ ++ ++ P ++ + M+ A ++ + L
Sbjct: 55 LPSAETTQQLAQSSVLGEVLATGLRTRQAH---PESSEEELRSAMEGAGRAAAHKLEKYL 111
Query: 133 SFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYS---NNVVSIPGIIESLISILLGLCVS 189
S L +++SA L+G+LG V+GM+ F S G S N GI +L + GL V+
Sbjct: 112 SALATIASAAPLLGLLGTVIGMIEIFGSQPGASSGAGNPAQLAHGISIALYNTAFGLMVA 171
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
IPS I + F + + ME + +F L R
Sbjct: 172 IPSLIFWRYFRARVDAYLLGMELASEQFVRHLGR 205
>gi|253584054|ref|ZP_04861252.1| ligand gated channel protein TolQ [Fusobacterium varium ATCC 27725]
gi|251834626|gb|EES63189.1| ligand gated channel protein TolQ [Fusobacterium varium ATCC 27725]
Length = 206
Score = 112 bits (280), Expect = 5e-23, Method: Composition-based stats.
Identities = 40/201 (19%), Positives = 91/201 (45%), Gaps = 15/201 (7%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFIT----LRRQFREFEQLFWSGQSLETVCKSLKNHHNIG 83
+ +LFI S++S +VII++ F + R FR+ + S + + + + N
Sbjct: 12 MWVLFILSLISTTVIIERLFFFFKKEKTMNRNFRKEVIMAVSNRDMCRIIEICDKERNSV 71
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRI--DRMMDVAIARELEEITEKLSFLGSMSSA 141
+ KK + ++D D+++ E+ + ++L LG ++
Sbjct: 72 GCTV--------KKFLCRCNICDTNLKDFHQFDQIIKEIEMDEISPLEKRLHILGIIAHV 123
Query: 142 GLLVGILGAVLGMMGFFQSIAGYYSNN-VVSIPGIIESLISILLGLCVSIPSSIAYNKFI 200
++G+LG V GM+ F+ +A + + + + I ++LI+ GL ++IP+ + YN
Sbjct: 124 APMLGLLGTVTGMIDAFKDLAKFGAGDPTIVADSISKALITTAAGLSIAIPALVVYNLLN 183
Query: 201 EDSKKFAMQMEGFANEFSAIL 221
+ ++ +++ I+
Sbjct: 184 KRIEEIEEEIDKITTNVINIV 204
>gi|326565865|gb|EGE16027.1| motA/TolQ/ExbB proton channel [Moraxella catarrhalis BC1]
Length = 182
Score = 112 bits (280), Expect = 5e-23, Method: Composition-based stats.
Identities = 39/212 (18%), Positives = 75/212 (35%), Gaps = 35/212 (16%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
MD + + K + +L S++SW V I + +N +
Sbjct: 1 MDFGFY--WSHTDAVSKTLFFVLLALSMISWVVGIMRVINSRR------------RTANI 46
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
++ + + + G + ++ + IA E+
Sbjct: 47 VDELTAQIN--------------------IQNLGDLPFDQRKMATEQKLLQQIALHRYEL 86
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLC 187
+ L LG+ +S +G+ G V G+ SI + + G + E+LI LGL
Sbjct: 87 EKGLPVLGTTASIAPFIGLFGTVWGIFHALHSIGATGQAGLAQVAGPVGEALIMTGLGLA 146
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
V+IP+ I YN +K+ A++ +
Sbjct: 147 VAIPAVIFYNIATRINKQAIHLATDTAHQILS 178
>gi|90021706|ref|YP_527533.1| MotA/TolQ/ExbB proton channel [Saccharophagus degradans 2-40]
gi|89951306|gb|ABD81321.1| MotA/TolQ/ExbB proton channel [Saccharophagus degradans 2-40]
Length = 209
Score = 112 bits (280), Expect = 5e-23, Method: Composition-based stats.
Identities = 42/217 (19%), Positives = 91/217 (41%), Gaps = 17/217 (7%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
+FA+ G I+ L + S+ ++ I++ + + W+ +
Sbjct: 1 MFAILASGGW---LIMVPLLLCSVAVIAISIERFWTLDPSKIAPKHQLGQVWNWLQNNQL 57
Query: 73 -CKSLKN-HHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
+ LK H+ L I + +S + + + + A + + E+ +
Sbjct: 58 DSEKLKELRHSSQLGRILAAGLSNSRHGR-----------EVMKDSIQEAANQVVHELEK 106
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV-SIPGIIESLISILLGLCVS 189
L LG++++ L+G+LG V+GM+ F ++ + N GI E+L++ +GL V+
Sbjct: 107 FLGALGTIAAIAPLLGLLGTVIGMIKVFTALNLEGATNAAPLAGGISEALVTTAVGLFVA 166
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
IP+ +A+ F+ + + +E A + L
Sbjct: 167 IPAMMAHRFFVRRVEALVVTLEQEAIKLVDALHNDRR 203
>gi|78222671|ref|YP_384418.1| MotA/TolQ/ExbB proton channel [Geobacter metallireducens GS-15]
gi|78193926|gb|ABB31693.1| outer membrane transport energization protein ExbB [Geobacter
metallireducens GS-15]
Length = 603
Score = 112 bits (280), Expect = 5e-23, Method: Composition-based stats.
Identities = 43/221 (19%), Positives = 82/221 (37%), Gaps = 26/221 (11%)
Query: 5 GLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFW 64
G AI+ + F LF+ G V + K + + + F + F
Sbjct: 391 GWAIIGLCTFMLFLAAG-------------------VFVYKFLALQKIVKGNEMFLESFG 431
Query: 65 SGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPI------GIQDRIDRMMD 118
+ + + + + I+ + E ++ + + + +D
Sbjct: 432 ELHDPLALEDTDDDLKHSSMYRIYQAGKIEIERWLARQSADKEISSLSPSALNIFRSSLD 491
Query: 119 VAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVS-IPGIIE 177
A +E + ++ L + S G G+LG V G+M F S+A N+ + PG+
Sbjct: 492 KANVKEKQNLSSWLIVMTLGISGGPFWGLLGTVWGVMNTFASLAESGEANLTAIAPGVAS 551
Query: 178 SLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFS 218
+L L GL V+IP+ AY+ K F +E++
Sbjct: 552 ALACTLFGLFVAIPALFAYSYLTNRMKNLNADTHVFIDEYA 592
>gi|189347445|ref|YP_001943974.1| MotA/TolQ/ExbB proton channel [Chlorobium limicola DSM 245]
gi|189341592|gb|ACD90995.1| MotA/TolQ/ExbB proton channel [Chlorobium limicola DSM 245]
Length = 248
Score = 111 bits (279), Expect = 6e-23, Method: Composition-based stats.
Identities = 39/209 (18%), Positives = 88/209 (42%), Gaps = 11/209 (5%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITL--RRQFREFEQLFWS---G 66
S+F + G V ++ I ++ + I+++ + + +F Q
Sbjct: 32 SMFHAVWKGGPVVSVLMA--LIMMVI--AYIVERIIALNKASGKGNIPQFVQSLKQDIEN 87
Query: 67 QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
S++ +H + L+A+ + + ++K +++ ++ A E+
Sbjct: 88 GSIDEAIAKCDDHQSS-LSAVLRAVLDRYRKMVSMNVTDRDKKISEMEKAVEEATVMEMP 146
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISILLG 185
+ + L + +++S +VG+LG LGM+ F ++A + + V + GI E+L + LG
Sbjct: 147 LLEKNLVAISTIASISTMVGLLGTTLGMIRAFAAMATSGAPDAVQLSMGISEALFNTALG 206
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFA 214
+ I + YN F F ++ A
Sbjct: 207 IVGGIMGIVTYNVFTNKVDHFNYMIDEAA 235
>gi|315223952|ref|ZP_07865796.1| MotA/TolQ/ExbB proton channel family protein [Capnocytophaga
ochracea F0287]
gi|314946056|gb|EFS98061.1| MotA/TolQ/ExbB proton channel family protein [Capnocytophaga
ochracea F0287]
Length = 234
Score = 111 bits (279), Expect = 6e-23, Method: Composition-based stats.
Identities = 47/228 (20%), Positives = 93/228 (40%), Gaps = 17/228 (7%)
Query: 3 NYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQL 62
+ +SI L + G+ II++LF+ ++ + ++ + + F
Sbjct: 19 PVAVQEKTLSIMELILDGGMGSIIIISILFVMLAVALFLYFERLFAIKAASKMDKTFMYK 78
Query: 63 FW---SGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDV 119
S L+ K L N +A + +S K + I++ ++
Sbjct: 79 IRDCISAGRLD-AAKMLCVQSNTPVARLIEKGVSRIGKPL-----------EDINKAIEN 126
Query: 120 AIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA--GYYSNNVVSIPGIIE 177
A E+ + + + L +++ AG ++G LG V+GM+ F +A G + GI
Sbjct: 127 AGTLEVYNLEKNTAILATIAGAGPMIGFLGTVVGMIMSFHEMASAGGQAEMGSLASGIYT 186
Query: 178 SLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
++ + + GL V I + + YN + + K ME A EF +L+
Sbjct: 187 AMATTVAGLIVGIIAYVGYNHLVVKTDKVVHLMEANAVEFLDLLNEPL 234
>gi|167751915|ref|ZP_02424042.1| hypothetical protein ALIPUT_00157 [Alistipes putredinis DSM 17216]
gi|167660156|gb|EDS04286.1| hypothetical protein ALIPUT_00157 [Alistipes putredinis DSM 17216]
Length = 224
Score = 111 bits (279), Expect = 6e-23, Method: Composition-based stats.
Identities = 38/220 (17%), Positives = 82/220 (37%), Gaps = 19/220 (8%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+ ++ LFM G + +L I L+ + +++ + F
Sbjct: 19 MGLWQLFMSGGWL----MWVLLILGGLTIFIFVERFMAIRKASEFDMNFMNRIRDYILDG 74
Query: 71 TVCKS--LKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
V + L N +A + + + + ++ E+ ++
Sbjct: 75 KVAAAVDLCRKTNTPIARMIEKGIGRIGRPMSD-----------VQSAIENVANLEVSKL 123
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSN--NVVSIPGIIESLISILLGL 186
L L +++ ++G LG V+GM+ F +A + G+ ++I+ + GL
Sbjct: 124 ETNLPILATIAGGAPMIGFLGTVVGMVQTFMDMAAAGGTVDMSLLSSGMYVAMITTVGGL 183
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
V IP+ YN + +K +ME + F IL++ +
Sbjct: 184 LVGIPAYFGYNYLVARIEKLVFRMEANSIAFMDILNQPVQ 223
>gi|189499602|ref|YP_001959072.1| MotA/TolQ/ExbB proton channel [Chlorobium phaeobacteroides BS1]
gi|189495043|gb|ACE03591.1| MotA/TolQ/ExbB proton channel [Chlorobium phaeobacteroides BS1]
Length = 248
Score = 111 bits (279), Expect = 6e-23, Method: Composition-based stats.
Identities = 39/212 (18%), Positives = 87/212 (41%), Gaps = 9/212 (4%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITL--RRQFREFEQLFWS 65
D S F + G V ++ L + I + I+++ + + F +
Sbjct: 28 TPDGSTFHNLYEGGYVV-TVLIALILMVI---AYIVERLIALNKASGKGNIAGFVKELKQ 83
Query: 66 GQSLETVCKSLK--NHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAR 123
+ ++L + H +AA+ + ++ +++ ++ A
Sbjct: 84 DVDAGAIDQALARCDDHQSSVAAVLRAVFQRYQMLTQHNISDREKKISEMEKAVEEATTM 143
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISI 182
E+ + + L + +++S +VG+LG LGM+ F+++A + + V + GI E+L +
Sbjct: 144 EMPLLEKNLVAISTIASISTMVGLLGTTLGMIRAFEAMATSGAPDAVQLSLGISEALFNT 203
Query: 183 LLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFA 214
LG+ I + YN F +F ++ A
Sbjct: 204 ALGIVGGIMGIVTYNVFTNRVDRFTYMIDEAA 235
>gi|215484732|ref|YP_002326967.1| Biopolymer transport exbB protein [Acinetobacter baumannii
AB307-0294]
gi|213988486|gb|ACJ58785.1| Biopolymer transport exbB protein [Acinetobacter baumannii
AB307-0294]
Length = 194
Score = 111 bits (279), Expect = 6e-23, Method: Composition-based stats.
Identities = 41/195 (21%), Positives = 77/195 (39%), Gaps = 31/195 (15%)
Query: 25 KCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGL 84
K + +L SI +W+V I + + L++Q L SLK L
Sbjct: 3 KTLYFILLAMSIATWTVFILRLMGTRQLKQQAYA---------QLSQAITSLKA-KLQPL 52
Query: 85 AAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLL 144
+ A++E + + I+ E + +S LG+++S
Sbjct: 53 SFEQRKAVAE--------------------QALLRQISAEKANADKGISVLGTIASIAPF 92
Query: 145 VGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISILLGLCVSIPSSIAYNKFIEDS 203
VG+ G V G+ ++ + + + E+LI LGL V+IP+ +AYN + +
Sbjct: 93 VGLFGTVWGIFHALVAVGKSGQAGLAQVATPVGEALIMTGLGLAVAIPAVLAYNICVRAN 152
Query: 204 KKFAMQMEGFANEFS 218
+ A ++ A+
Sbjct: 153 RGLAHDLQDQAHSLL 167
>gi|88810804|ref|ZP_01126061.1| MotA/TolQ/ExbB proton channel [Nitrococcus mobilis Nb-231]
gi|88792434|gb|EAR23544.1| MotA/TolQ/ExbB proton channel [Nitrococcus mobilis Nb-231]
Length = 200
Score = 111 bits (279), Expect = 6e-23, Method: Composition-based stats.
Identities = 35/198 (17%), Positives = 80/198 (40%), Gaps = 10/198 (5%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAI 87
+ + S+++ + I++ R + W +K++
Sbjct: 1 MLPILACSVVALAFTIERCWALRRSRVVPKHLVAQVWH---------LVKSNTLEPTQLR 51
Query: 88 FMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGI 147
+ A S + G + ++ + ++ E + L+ LG++++ L+G+
Sbjct: 52 ELRAGSPLGRMLAAGLVNIQYGREIVLESIEDRGRHEAHGLERYLNTLGTIAAVSPLLGL 111
Query: 148 LGAVLGMMGFFQSIAGYYSNN-VVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKF 206
LG V+GM+ F SI+ N GI ++L + GL V+IP+ +AY F +
Sbjct: 112 LGTVIGMIKVFSSISSAGLGNVTALAGGISQALFTTAAGLVVAIPTLMAYRYFRGKVETL 171
Query: 207 AMQMEGFANEFSAILSRQ 224
+ +E + + ++ +
Sbjct: 172 VVDLEQESLKLVEVIHAR 189
>gi|264678957|ref|YP_003278864.1| MotA/TolQ/ExbB proton channel [Comamonas testosteroni CNB-2]
gi|299530081|ref|ZP_07043508.1| MotA/TolQ/ExbB proton channel [Comamonas testosteroni S44]
gi|262209470|gb|ACY33568.1| MotA/TolQ/ExbB proton channel [Comamonas testosteroni CNB-2]
gi|298722061|gb|EFI62991.1| MotA/TolQ/ExbB proton channel [Comamonas testosteroni S44]
Length = 210
Score = 111 bits (279), Expect = 6e-23, Method: Composition-based stats.
Identities = 45/214 (21%), Positives = 87/214 (40%), Gaps = 12/214 (5%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
+ ++ G I L SIL+ ++I ++ + + S +
Sbjct: 1 MLSIIQAAGWP----IWPLIACSILALALIFERFASLKASKVAPTNLLNEAISVST--KH 54
Query: 73 CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKL 132
S + + +++ ++ ++ P ++ + M+ A ++ + L
Sbjct: 55 LPSAETTQQLAQSSVLGEVLATGLRTRQAH---PESSEEELRSAMEGAGRAAAHKLEKYL 111
Query: 133 SFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYS---NNVVSIPGIIESLISILLGLCVS 189
S L +++SA L+G+LG V+GM+ F S G S N GI +L + GL V+
Sbjct: 112 SALATIASAAPLLGLLGTVIGMIEIFGSQPGASSGAGNPAQLAHGISIALYNTAFGLMVA 171
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
IPS I + F + + ME + +F L R
Sbjct: 172 IPSLIFWRYFRARVDGYLLGMELASEQFVRHLGR 205
>gi|307825495|ref|ZP_07655713.1| MotA/TolQ/ExbB proton channel [Methylobacter tundripaludum SV96]
gi|307733381|gb|EFO04240.1| MotA/TolQ/ExbB proton channel [Methylobacter tundripaludum SV96]
Length = 204
Score = 111 bits (279), Expect = 7e-23, Method: Composition-based stats.
Identities = 43/219 (19%), Positives = 87/219 (39%), Gaps = 18/219 (8%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
+F + G + + + SI + +I ++ + + E W + +
Sbjct: 1 MFEIIKSGGWM----MLPIILSSIGAMGIIAERFWSLRRKKILPPELVAQVWRLSREKKL 56
Query: 73 CKSLKNH--HNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
H + L I + ++ + ++ A R + ++
Sbjct: 57 DDVTLRHLRSSSPLGCILAAGLANSHHGRK-----------FMKECIEEAGRRVVHDLER 105
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-VVSIPGIIESLISILLGLCVS 189
L+ LG++++ L+G+LG V GM+ F S+ + S N V GI +LI+ GL V+
Sbjct: 106 FLNTLGTIAAVSPLLGLLGTVFGMIDIFASLLQHGSGNPAVLAGGISVALITTASGLTVA 165
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
IPS + + F ++ + ME A + IL + +
Sbjct: 166 IPSLVFHRYFERLVDEYVVTMEEEALKLVDILHEDRKES 204
>gi|153877900|ref|ZP_02004410.1| MotA/TolQ/ExbB proton channel family protein [Beggiatoa sp. PS]
gi|152065636|gb|EDN65590.1| MotA/TolQ/ExbB proton channel family protein [Beggiatoa sp. PS]
Length = 202
Score = 111 bits (279), Expect = 7e-23, Method: Composition-based stats.
Identities = 43/217 (19%), Positives = 87/217 (40%), Gaps = 18/217 (8%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
+F G I+ + SI + ++I ++ + R + W + +
Sbjct: 1 MFEFISAGGW----IMWPIVFCSIAAAAIIGERFWSLQKKRVVPKGLVAQVWKWTKEDKL 56
Query: 73 CKSLKN--HHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
K + L I + + + D+ + + ++ ++ + ++
Sbjct: 57 DKKRLTLLRSHSPLGQILAAGL--VNRHHDR---------EMMKASIEEESSQVIHDLER 105
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYY-SNNVVSIPGIIESLISILLGLCVS 189
L+ LG+++ L+G+LG V GM+ F ++ N V G+ E+LI+ GL V+
Sbjct: 106 YLNALGTIAEIAPLLGLLGTVTGMIRMFAAVGEVGLGNPQVLSSGLSEALITTAAGLSVA 165
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
IP+ I Y F + + ME A + IL + E
Sbjct: 166 IPAFIFYRYFRGLIDELVLSMEQEALKMIDILHGERE 202
>gi|332531104|ref|ZP_08407020.1| MotA/TolQ/ExbB proton channel [Hylemonella gracilis ATCC 19624]
gi|332039450|gb|EGI75860.1| MotA/TolQ/ExbB proton channel [Hylemonella gracilis ATCC 19624]
Length = 223
Score = 111 bits (279), Expect = 7e-23, Method: Composition-based stats.
Identities = 42/224 (18%), Positives = 88/224 (39%), Gaps = 15/224 (6%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLR----RQFREFEQLFWSGQS 68
+F++ G I L + SIL +++I+++++ T++ E +
Sbjct: 1 MFSIIQAAGWP----IWPLILCSILGLALVIERALSLQTVKVTPPNLLNEVLRATRRSMP 56
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
V L+ N L + S + ++ A + ++ + ++ + ++
Sbjct: 57 SSDVIAQLEQ--NSPLGEMLASGLR-TAQAAQSHASTAEELRTALREAVEDSGRLVAHKL 113
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI----AGYYSNNVVSIPGIIESLISILL 184
LS L +++S L+G+ G V+GM+ F S A N GI +L +
Sbjct: 114 ERYLSALATIASIAPLLGLFGTVIGMIEIFGSQAPTNASGGGNPAQLAHGISIALYNTAF 173
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
GL ++IP+ + + F + +E L +GN
Sbjct: 174 GLVIAIPTLVFWRYFRARVDSHLLALELAGERLVQHLVALRQGN 217
>gi|34762908|ref|ZP_00143890.1| Biopolymer transport exbB protein [Fusobacterium nucleatum subsp.
vincentii ATCC 49256]
gi|237741249|ref|ZP_04571730.1| biopolymer transport exbB protein [Fusobacterium sp. 4_1_13]
gi|256846392|ref|ZP_05551849.1| biopolymer transport exbB protein [Fusobacterium sp. 3_1_36A2]
gi|27887435|gb|EAA24523.1| Biopolymer transport exbB protein [Fusobacterium nucleatum subsp.
vincentii ATCC 49256]
gi|229430781|gb|EEO40993.1| biopolymer transport exbB protein [Fusobacterium sp. 4_1_13]
gi|256718161|gb|EEU31717.1| biopolymer transport exbB protein [Fusobacterium sp. 3_1_36A2]
Length = 203
Score = 111 bits (278), Expect = 7e-23, Method: Composition-based stats.
Identities = 46/200 (23%), Positives = 80/200 (40%), Gaps = 19/200 (9%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQF-----REFEQLFWSGQSLETVCKSLKNHHNI 82
+ + + I+ I+++ F+ R + QL G+ E + N +
Sbjct: 11 MYFILLMGIIGLYAILERFSYFLIKERNNFSRLPSDVRQLINEGKIKEAIVALNSNKSST 70
Query: 83 G--LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSS 140
L I + E K++ A G + I+R ++ + + L +++
Sbjct: 71 SVVLKEILIYGYKENKETL--SALEEKGKEKAIER---------IKSLERNMWLLSLVAN 119
Query: 141 AGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKF 199
A L+G+LG V GM+ F SIA + + V GI E+L + GL V+IP I YN F
Sbjct: 120 ASPLLGLLGTVTGMIKAFNSIALNGTGDAGVLAKGISEALYTTAGGLIVAIPCMIFYNYF 179
Query: 200 IEDSKKFAMQMEGFANEFSA 219
+ +E E
Sbjct: 180 NKKIDLVVSDIEKTCTELLN 199
>gi|325298876|ref|YP_004258793.1| MotA/TolQ/ExbB proton channel [Bacteroides salanitronis DSM 18170]
gi|324318429|gb|ADY36320.1| MotA/TolQ/ExbB proton channel [Bacteroides salanitronis DSM 18170]
Length = 270
Score = 111 bits (278), Expect = 8e-23, Method: Composition-based stats.
Identities = 42/218 (19%), Positives = 93/218 (42%), Gaps = 18/218 (8%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVI---IQKSVNFITL--RRQF 56
NN+ L ++ + G+ V I TLL +VI +++ R +
Sbjct: 48 NNHPLPG---NMLGTIYKGGVVVPVIQTLLL-------TVIALSVERYFTIRAAFGRGKL 97
Query: 57 REFEQLFWSGQSLETV--CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRID 114
+F + + ++L + +A + + + +++ I
Sbjct: 98 VKFVAQIKDALAKNDMQTAQTLCDKQRGSVANVVGATLQTYREMEANTELDKDQKVLAIQ 157
Query: 115 RMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP- 173
+ ++ A A E+ + + L +G++++ G L+G+LG V+GM+ F +++ + V++
Sbjct: 158 KSLEEATALEMPMLQQNLPIIGTITTLGTLMGLLGTVIGMIRSFAALSAGGGTDSVALST 217
Query: 174 GIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
GI E+LI+ G+ + I+YN F K ++
Sbjct: 218 GISEALINTAFGILTGALAVISYNYFTNKIDKLTYSLD 255
>gi|166154810|ref|YP_001654928.1| macromolecule transporter [Chlamydia trachomatis 434/Bu]
gi|166155685|ref|YP_001653940.1| macromolecule transporter [Chlamydia trachomatis
L2b/UCH-1/proctitis]
gi|301336088|ref|ZP_07224332.1| macromolecule transporter [Chlamydia trachomatis L2tet1]
gi|165930798|emb|CAP04296.1| macromolecule transporter [Chlamydia trachomatis 434/Bu]
gi|165931673|emb|CAP07250.1| macromolecule transporter [Chlamydia trachomatis
L2b/UCH-1/proctitis]
Length = 232
Score = 111 bits (278), Expect = 9e-23, Method: Composition-based stats.
Identities = 46/222 (20%), Positives = 93/222 (41%), Gaps = 18/222 (8%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKS---VNFITLRRQFREFEQLFWSGQ-S 68
I F + L K I LF SI +W+V+ QK F+ + +EF S
Sbjct: 9 IIQSFQEADLFGKVIFFSLFALSICTWTVLHQKLSIQKKFLKSGKSLKEFLIKNRHSPLS 68
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKG-----ARSPIGIQDRIDR--MMDVAI 121
L+ + + ++ + + DK R+P+ + I + A+
Sbjct: 69 LDI------HPESTPFTDLYFTIKRGTLELLDKNRQLAPERTPLLSVEDIQSLETLFNAV 122
Query: 122 ARELEEITEKLSFL-GSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLI 180
+ + K +F+ + S +G+LG V G++ F I+ +N + + G+ +L
Sbjct: 123 MPKYRALLNKNNFIPATTISLAPFLGLLGTVWGILLAFAHISTGQANGTIMMEGLATALG 182
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
+ ++GL V+IPS + +N + + ++++E A +
Sbjct: 183 TTIVGLFVAIPSLVGFNYLRAHAFQVSLEIEQTAFLLLNSIE 224
>gi|307718628|ref|YP_003874160.1| tolQ-type transport protein [Spirochaeta thermophila DSM 6192]
gi|306532353|gb|ADN01887.1| probable tolQ-type transport protein [Spirochaeta thermophila DSM
6192]
Length = 208
Score = 111 bits (277), Expect = 9e-23, Method: Composition-based stats.
Identities = 43/216 (19%), Positives = 94/216 (43%), Gaps = 23/216 (10%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLR----RQFREFEQLFWSGQS 68
+ + ++ G + II + I + +++I++ + F +R + F + G
Sbjct: 1 MLNVLIKGGPVLWAII---LLAFIGT-AIVIERILYFRKIRVDEEKLFLRIKSSLEKGHF 56
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
E + + + + L+ + + P IQ ++ A +E+ +
Sbjct: 57 DEALY--ICDTNYSPLSVLIKVGIE--------HRDHPEHIQ---REVIKDAANQEVPRL 103
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA--GYYSNNVVSIPGIIESLISILLGL 186
+ LS LG+++ L+G+LG V G M F + G ++ + GI E+LI+ + G+
Sbjct: 104 EKNLSGLGTIAHIAPLLGLLGTVTGTMKTFGVLGQFGAVTDPGILATGISEALITTVAGI 163
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
V++P+ I YN + ++ME N +++
Sbjct: 164 LVAVPAVIFYNYLVTKVNLLLIKMENQVNSLILMIN 199
>gi|93006076|ref|YP_580513.1| MotA/TolQ/ExbB proton channel [Psychrobacter cryohalolentis K5]
gi|92393754|gb|ABE75029.1| MotA/TolQ/ExbB proton channel [Psychrobacter cryohalolentis K5]
Length = 213
Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats.
Identities = 39/209 (18%), Positives = 74/209 (35%), Gaps = 31/209 (14%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+ + + K + LF SI+SW I + L +
Sbjct: 1 MDFTDYWQYTDIITKSLFFALFALSIVSWVTGILRLYYSHQLAK---------------- 44
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
TV L + + ++ E + ++ M+ I R + +
Sbjct: 45 TVVVDLAQQIHNQIPPTLQASPEERRLLTEQ--------------MLLQQIGRYRYQSEQ 90
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVS 189
L LG+ ++ +G+ G V G+ +SI + + G + E+LI LGL V+
Sbjct: 91 GLPLLGTTAAIAPFIGLFGTVWGIFHALRSIGDSGQAGLAQVAGPVGEALIMTGLGLAVA 150
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFANEFS 218
IP+ I YN +++ + A+
Sbjct: 151 IPAVIFYNVITRMNRRILYRANDIAHGLL 179
>gi|29840727|ref|NP_829833.1| MotA/TolQ/ExbB proton channel family protein [Chlamydophila caviae
GPIC]
gi|29835077|gb|AAP05711.1| MotA/TolQ/ExbB proton channel family protein [Chlamydophila caviae
GPIC]
Length = 232
Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats.
Identities = 41/218 (18%), Positives = 83/218 (38%), Gaps = 10/218 (4%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKS---VNFITLRRQFREFEQLFWSGQSL 69
I F + L K I L I S+ +W+V+ QK F+ + ++F
Sbjct: 9 IIQAFREADLFGKGIFFSLLILSLCTWTVLHQKLAIQKKFLKSGKSLKDFLIKNRHAPLS 68
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEW-----KKSCDKGARSPIGIQDRIDRMMDVAIARE 124
+ L + L E +++ D G + ++ ++ + +
Sbjct: 69 LEIHPELNPFAD--LYFTIKRGTLELLDKNRQQAPDHGPVLSMEDIQSLETLLGAIMPKY 126
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILL 184
+ E + S +G+LG V G++ F I+ + + G+ +L + ++
Sbjct: 127 RAIMHENNFIPATTISLAPFLGLLGTVWGILVAFSHISSGEAGGTAMMEGLATALGTTIV 186
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
GL V+IPS I +N S + +++E A +
Sbjct: 187 GLFVAIPSLIGFNYLKAHSSRLILEIEQTAYLLLNSIE 224
>gi|21674404|ref|NP_662469.1| MotA/TolQ/ExbB proton channel family protein [Chlorobium tepidum
TLS]
gi|21647585|gb|AAM72811.1| MotA/TolQ/ExbB proton channel family protein [Chlorobium tepidum
TLS]
Length = 247
Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats.
Identities = 43/209 (20%), Positives = 89/209 (42%), Gaps = 11/209 (5%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITL--RRQFREFEQLFWS---G 66
S+F + G V ++ L + I + I+++ V + EF Q
Sbjct: 32 SMFHAVWKGGPIV-SVLMALILMVI---AYIVERIVALNKASGKGSITEFVQSLKQDVDS 87
Query: 67 QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
S++ +H + L+A+ + + +K + + ++ A E+
Sbjct: 88 GSIDQAISRCDDHQSS-LSAVLRAVLDRYKMLAVHNVTDREKRISEMQKAVEEATLMEMP 146
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISILLG 185
+ + L + +++S +VG+LG LGM+ F ++A + + V + GI E+L + LG
Sbjct: 147 LLEKNLVAISTIASISTMVGLLGTTLGMIRAFSAMATSGAPDAVQLSLGISEALFNTALG 206
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFA 214
+ I + YN F +F+ Q++ A
Sbjct: 207 ILGGIMGIVTYNVFTSRVDRFSYQIDEAA 235
>gi|24215943|ref|NP_713424.1| biopolymer transport protein TolQ [Leptospira interrogans serovar
Lai str. 56601]
gi|24197157|gb|AAN50442.1| biopolymer transport protein TolQ [Leptospira interrogans serovar
Lai str. 56601]
Length = 270
Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats.
Identities = 44/219 (20%), Positives = 82/219 (37%), Gaps = 20/219 (9%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFW---SGQSL 69
LF+ G + L + SI++ +I ++ T + + + + L
Sbjct: 65 FVDLFLLGGW----TMYPLALSSIVALGIIFERIYFLATAKLLPKGYNIDLGETMDAKGL 120
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+ V L + + + + G + + ++ A + +
Sbjct: 121 DAVRGFLDERKDYKITQVLAGGIE-----------VSSGDAEIFAKGVEREAAEVITVLE 169
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCV 188
L L ++S+ L+G LG V GM+ F +IA N V GI E+LI+ GL V
Sbjct: 170 RGLVILAAVSTIAPLIGFLGTVSGMINAFDAIANADQVNAKVVAGGIKEALITTAAGLIV 229
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFS-AILSRQTE 226
+IP+ + F ++E AN L R ++
Sbjct: 230 AIPAMTFHQYLTSRIDGFTSEIEEAANRIYKEFLKRNSQ 268
>gi|329943312|ref|ZP_08292086.1| motA/TolQ/ExbB proton channel family protein [Chlamydophila
psittaci Cal10]
gi|332287888|ref|YP_004422789.1| motA/TolQ/ExbB proton channel family protein [Chlamydophila
psittaci 6BC]
gi|313848460|emb|CBY17464.1| putative transport protein TolQ [Chlamydophila psittaci RD1]
gi|325506610|gb|ADZ18248.1| motA/TolQ/ExbB proton channel family protein [Chlamydophila
psittaci 6BC]
gi|328814859|gb|EGF84849.1| motA/TolQ/ExbB proton channel family protein [Chlamydophila
psittaci Cal10]
gi|328915152|gb|AEB55985.1| tolQ protein, putative [Chlamydophila psittaci 6BC]
Length = 232
Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats.
Identities = 40/218 (18%), Positives = 82/218 (37%), Gaps = 10/218 (4%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKS---VNFITLRRQFREFEQLFWSGQSL 69
I + + L K I L I S+ +W+V+ QK F+ + ++F
Sbjct: 9 IIQAYTEADLFGKGIFFSLLILSLCTWTVLHQKLAIQKKFLKSGKSLKDFLIKNRHAPLS 68
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEW-----KKSCDKGARSPIGIQDRIDRMMDVAIARE 124
+ L + L E +++ D G + ++ ++ + +
Sbjct: 69 LEIHPELNPFAD--LYFTIKRGTLELLDKNRQQAPDHGPVLSVEDIQSLETLLGAVMPKY 126
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILL 184
+ E + S +G+LG V G++ F I+ + G+ +L + ++
Sbjct: 127 RALMHENNFIPATTISLAPFLGLLGTVWGILTAFSHISSGEVGGTAMMEGLATALGTTIV 186
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
GL V+IPS I +N S + +++E A +
Sbjct: 187 GLFVAIPSLIGFNYLKAHSSRLILEIEQTAYLLLNSIE 224
>gi|332521394|ref|ZP_08397850.1| MotA/TolQ/ExbB proton channel [Lacinutrix algicola 5H-3-7-4]
gi|332043122|gb|EGI79320.1| MotA/TolQ/ExbB proton channel [Lacinutrix algicola 5H-3-7-4]
Length = 233
Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats.
Identities = 51/234 (21%), Positives = 99/234 (42%), Gaps = 22/234 (9%)
Query: 2 NNYGLAIMD-----ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQF 56
N GLA + +SI L G A II LLF+ +++ + ++ + +
Sbjct: 12 NTDGLAEGESVEKTLSIIELITTGGTAGIIIIALLFVLFVVALYIYFERILAIKEASKVD 71
Query: 57 REFEQLFW---SGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRI 113
F S +++ ++L N ++ + +S K D I
Sbjct: 72 SNFMNQIRDYVSNGKIDSA-QNLCAQTNSPVSRLISKGVSRIGKPLDD-----------I 119
Query: 114 DRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV--S 171
+ ++ A E+ + + +S L ++S A ++G LG V+GM+ IA + +
Sbjct: 120 NTAIENAGRLEIYSLEKNISVLATISGAAPMIGFLGTVIGMILSIFEIANSGGSIDIKTL 179
Query: 172 IPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
G+ ++ + + GL V I + IAYN + + K +ME + EF +L+ +
Sbjct: 180 ADGLYTAMTTTVGGLIVGIIAYIAYNHLVVKTDKVVYKMEANSLEFLDLLNEPS 233
>gi|15605326|ref|NP_220112.1| polysaccharide transporter [Chlamydia trachomatis D/UW-3/CX]
gi|76789334|ref|YP_328420.1| component of a macromolecule transport system [Chlamydia
trachomatis A/HAR-13]
gi|237803024|ref|YP_002888218.1| macromolecule transporter [Chlamydia trachomatis B/Jali20/OT]
gi|237804945|ref|YP_002889099.1| macromolecule transporter [Chlamydia trachomatis B/TZ1A828/OT]
gi|255311417|ref|ZP_05353987.1| macromolecule transporter [Chlamydia trachomatis 6276]
gi|255317718|ref|ZP_05358964.1| macromolecule transporter [Chlamydia trachomatis 6276s]
gi|255348977|ref|ZP_05380984.1| macromolecule transporter [Chlamydia trachomatis 70]
gi|255503516|ref|ZP_05381906.1| macromolecule transporter [Chlamydia trachomatis 70s]
gi|255507194|ref|ZP_05382833.1| macromolecule transporter [Chlamydia trachomatis D(s)2923]
gi|3329040|gb|AAC68198.1| polysaccharide transporter [Chlamydia trachomatis D/UW-3/CX]
gi|76167864|gb|AAX50872.1| component of a macromolecule transport system [Chlamydia
trachomatis A/HAR-13]
gi|231273245|emb|CAX10160.1| macromolecule transporter [Chlamydia trachomatis B/TZ1A828/OT]
gi|231274258|emb|CAX11053.1| macromolecule transporter [Chlamydia trachomatis B/Jali20/OT]
gi|289525638|emb|CBJ15119.1| macromolecule transporter [Chlamydia trachomatis Sweden2]
gi|296435202|gb|ADH17380.1| macromolecule transporter [Chlamydia trachomatis E/150]
gi|296436131|gb|ADH18305.1| macromolecule transporter [Chlamydia trachomatis G/9768]
gi|296437059|gb|ADH19229.1| macromolecule transporter [Chlamydia trachomatis G/11222]
gi|296437991|gb|ADH20152.1| macromolecule transporter [Chlamydia trachomatis G/11074]
gi|296438921|gb|ADH21074.1| macromolecule transporter [Chlamydia trachomatis E/11023]
gi|297140493|gb|ADH97251.1| macromolecule transporter [Chlamydia trachomatis G/9301]
gi|297748726|gb|ADI51272.1| Tolq [Chlamydia trachomatis D-EC]
gi|297749606|gb|ADI52284.1| Tolq [Chlamydia trachomatis D-LC]
Length = 232
Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats.
Identities = 46/222 (20%), Positives = 93/222 (41%), Gaps = 18/222 (8%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKS---VNFITLRRQFREFEQLFWSGQ-S 68
I F + L K I LF SI +W+V+ QK F+ + +EF S
Sbjct: 9 IIQSFQEADLFGKVIFFSLFALSICTWTVLHQKLSIQKKFLKSGKSLKEFLIKNRHSPLS 68
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKG-----ARSPIGIQDRIDR--MMDVAI 121
L+ + + ++ + + DK R+P+ + I + A+
Sbjct: 69 LDI------HPESTPFTDLYFTIKRGTLELLDKNRQLAPERTPLLSVEDIQSLETLFNAV 122
Query: 122 ARELEEITEKLSFL-GSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLI 180
+ + K +F+ + S +G+LG V G++ F I+ +N + + G+ +L
Sbjct: 123 MPKYRALLNKNNFIPATTISLAPFLGLLGTVWGILLAFAHISTGQANGTIMMEGLATALG 182
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
+ ++GL V+IPS + +N + + ++++E A +
Sbjct: 183 TTIVGLFVAIPSLVGFNYLRAHAFQVSLEIEQTAFLLLNSIE 224
>gi|89897848|ref|YP_514958.1| biopolymer transport proteins [Chlamydophila felis Fe/C-56]
gi|89331220|dbj|BAE80813.1| biopolymer transport proteins [Chlamydophila felis Fe/C-56]
Length = 232
Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats.
Identities = 40/218 (18%), Positives = 84/218 (38%), Gaps = 10/218 (4%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKS---VNFITLRRQFREFEQLFWSGQSL 69
I + + L K I L I S+ +W+V+ QK F+ + ++F
Sbjct: 9 IIQAYREADLFGKGIFFSLLILSLCTWTVLHQKLAIQKKFLKSGKSLKDFLIKNRHAPLS 68
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEW-----KKSCDKGARSPIGIQDRIDRMMDVAIARE 124
+ L + L E +++ D G + ++ ++ + +
Sbjct: 69 LEIHPELNPFAD--LYFTIKRGALELLDKNRQQAPDHGPVLSMEDIQSLETLLGAIMPKY 126
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILL 184
+ E + S +G+LG V G++ F I+ ++ + G+ +L + ++
Sbjct: 127 RAIMHENNFIPATTISLAPFLGLLGTVWGILVAFSHISTGHAGGTAMMEGLATALGTTIV 186
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
GL V+IPS I +N S + +++E A +
Sbjct: 187 GLFVAIPSLIGFNYLKAHSSRLILEIEQTAYLLLNSIE 224
>gi|87118937|ref|ZP_01074835.1| MotA/TolQ/ExbB proton channel [Marinomonas sp. MED121]
gi|86165328|gb|EAQ66595.1| MotA/TolQ/ExbB proton channel [Marinomonas sp. MED121]
Length = 210
Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats.
Identities = 35/205 (17%), Positives = 84/205 (40%), Gaps = 18/205 (8%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLR----RQFREFEQLFWSGQSLETVCKSLKNHHNIG 83
+ L SIL+ +++I++ + + + + L+ ++G
Sbjct: 12 MWPLLACSILTLAIVIERFWTLRRSKITPQGMLNNILMMLREDKLNRENIRKLQL--SMG 69
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
+ +IF + + K + + + A + + E+ ++ LG++++
Sbjct: 70 MGSIFAAGILNSKYGRNI-----------MKESIQEAASHVIHELERFMNTLGTIAAISP 118
Query: 144 LVGILGAVLGMMGFFQSIAGYYSNNVVS-IPGIIESLISILLGLCVSIPSSIAYNKFIED 202
L+G+LG V+GM+ F + + GI E+L++ GL V+IP+ I + F
Sbjct: 119 LLGLLGTVVGMIKVFAVLMEQGVGDTALLAGGISEALLTTAAGLGVAIPALIFHRFFARR 178
Query: 203 SKKFAMQMEGFANEFSAILSRQTEG 227
+ + ME + + ++ +
Sbjct: 179 IDELVVTMEQQSTKLIEVIHGDRDA 203
>gi|45656783|ref|YP_000869.1| biopolymer transport exbB-like protein [Leptospira interrogans
serovar Copenhageni str. Fiocruz L1-130]
gi|45600019|gb|AAS69506.1| biopolymer transport exbB-like protein [Leptospira interrogans
serovar Copenhageni str. Fiocruz L1-130]
Length = 270
Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats.
Identities = 44/219 (20%), Positives = 82/219 (37%), Gaps = 20/219 (9%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFW---SGQSL 69
LF+ G + L + SI++ +I ++ T + + + + L
Sbjct: 65 FVDLFLLGGW----TMYPLALSSIVALGIIFERIYFLATAKLLPKGYNIDLGETMDAKGL 120
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+ V L + + + + G + + ++ A + +
Sbjct: 121 DAVRGFLDERKDYKITQVLAGGIE-----------VSSGDAEIFAKGVEREAAEVITVLE 169
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCV 188
L L ++S+ L+G LG V GM+ F +IA N V GI E+LI+ GL V
Sbjct: 170 RGLVILAAVSTIAPLIGFLGTVSGMINAFDAIANADQVNAKVVASGIKEALITTAAGLIV 229
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFS-AILSRQTE 226
+IP+ + F ++E AN L R ++
Sbjct: 230 AIPAMTFHQYLTSRIDGFTSEIEEAANRIYKEFLKRNSQ 268
>gi|53715418|ref|YP_101410.1| MotA/TolQ/ExbB proton channel [Bacteroides fragilis YCH46]
gi|60683384|ref|YP_213528.1| putative transmembrane MotA/TolQ/ExbB proton channel family protein
[Bacteroides fragilis NCTC 9343]
gi|253567440|ref|ZP_04844888.1| MotA/TolQ/ExbB proton channel [Bacteroides sp. 3_2_5]
gi|265768315|ref|ZP_06095574.1| MotA/TolQ/ExbB proton channel [Bacteroides sp. 2_1_16]
gi|52218283|dbj|BAD50876.1| MotA/TolQ/ExbB proton channel [Bacteroides fragilis YCH46]
gi|60494818|emb|CAH09624.1| putative transmembrane MotA/TolQ/ExbB proton channel family protein
[Bacteroides fragilis NCTC 9343]
gi|251943822|gb|EES84361.1| MotA/TolQ/ExbB proton channel [Bacteroides sp. 3_2_5]
gi|263252250|gb|EEZ23798.1| MotA/TolQ/ExbB proton channel [Bacteroides sp. 2_1_16]
gi|301164858|emb|CBW24418.1| putative transmembrane MotA/TolQ/ExbB proton channel family protein
[Bacteroides fragilis 638R]
Length = 270
Score = 110 bits (276), Expect = 1e-22, Method: Composition-based stats.
Identities = 46/215 (21%), Positives = 97/215 (45%), Gaps = 12/215 (5%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITL--RRQFREF 59
NN+ L + + G+ V I TLL LS I++ + R +F
Sbjct: 48 NNHPLPG---NFMGTIYKGGVIVPVIQTLLLTVLALS----IERYFALRSAFGRGSLVKF 100
Query: 60 EQLFWSGQSLETV--CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMM 117
S+ + + + + +A + S + ++++ ++ + S I + +
Sbjct: 101 VSNIKEALSVGDLRKAQEICDKQRGSVANVVTSTLRKYEEMENESSLSKDQKLLAIQKEL 160
Query: 118 DVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GII 176
+ A A EL + + L +G++++ G L+G+LG V+GM+ F ++A S + +++ GI
Sbjct: 161 EEATALELPMMEQNLPIIGTITTLGTLMGLLGTVIGMIRSFAALAAGGSADSMALSQGIS 220
Query: 177 ESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
E+LI+ G+ + I+YN + K ++
Sbjct: 221 EALINTAFGILTGALAVISYNYYTNKIDKLTYSLD 255
>gi|183396675|dbj|BAG28274.1| MotA/TolQ/Exb proton channel [Desulfotignum balticum]
Length = 490
Score = 110 bits (276), Expect = 1e-22, Method: Composition-based stats.
Identities = 46/218 (21%), Positives = 93/218 (42%), Gaps = 19/218 (8%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS-- 65
+++ + + G V I+ +L + + +++++ V F + + F S
Sbjct: 279 TLELDLADQIPKGGPIVWPILGILGLALV----ILLERLVFFFRKQMKSEPFMDQLRSLV 334
Query: 66 -GQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARE 124
G E ++ N + I ++A++ S ++ + AI E
Sbjct: 335 AGGDWEGCEALCRSRKNKWIPRILLTALAFRDHSRQD-----------MENALQEAILGE 383
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISIL 183
+ I +S LG +++ L+G+LG V GM+ F I Y + + + GI E+L++ +
Sbjct: 384 IPAIERFVSTLGMLAAIAPLLGLLGTVTGMINTFHVITYYGAGDPKMMSGGISEALVTTM 443
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
LGL V+IP + + + QME A F ++
Sbjct: 444 LGLTVAIPIMLFHTLLSRRVETQIGQMEEKAVAFVNMV 481
>gi|196233090|ref|ZP_03131938.1| MotA/TolQ/ExbB proton channel [Chthoniobacter flavus Ellin428]
gi|196222897|gb|EDY17419.1| MotA/TolQ/ExbB proton channel [Chthoniobacter flavus Ellin428]
Length = 634
Score = 110 bits (276), Expect = 1e-22, Method: Composition-based stats.
Identities = 50/215 (23%), Positives = 86/215 (40%), Gaps = 23/215 (10%)
Query: 32 FIFSILSW---SVIIQKSVNFITLRRQFREFEQLFWSGQS----LETVCKSLKNH----- 79
F+ S+L+ +V + K + + + + F + S L+ + N
Sbjct: 403 FLCSVLALIGGAVAVLKLMYLGRISKATKAFLPQWEELASNLHVLDHGSEESINSMGGKA 462
Query: 80 --------HNIGLAAIFMSAMSEWKK--SCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
L ++ SE + S ++ I +D + RE +++
Sbjct: 463 SPNQQKLLRQSPLYHLYQIGSSEIQDRVSSEEFCGLSGRSMQAIKATLDGGVVRETQKLN 522
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVS-IPGIIESLISILLGLCV 188
L FL + G +G+LG V+G+M F IA V S PGI +L++ + GL V
Sbjct: 523 SSLVFLTIGIAGGPYLGLLGTVIGVMITFAVIAKSGQVEVNSIAPGIAGALLATVAGLAV 582
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
+IPS AY+ K M F +EF A ++
Sbjct: 583 AIPSLFAYSYISTRIKDAISDMHVFIDEFVAKVAE 617
>gi|121998038|ref|YP_001002825.1| MotA/TolQ/ExbB proton channel [Halorhodospira halophila SL1]
gi|121589443|gb|ABM62023.1| MotA/TolQ/ExbB proton channel [Halorhodospira halophila SL1]
Length = 210
Score = 110 bits (276), Expect = 1e-22, Method: Composition-based stats.
Identities = 43/216 (19%), Positives = 88/216 (40%), Gaps = 30/216 (13%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLR--------RQFREFEQLFW 64
+ L G + + I S+L+ ++II++ R R +R ++
Sbjct: 1 MLELIQAGGWL----MIPILIGSVLALAIIIERFWTLQQRRILPEPLRGRAWRLAQEHEL 56
Query: 65 SGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARE 124
LET+ + L I + ++ + ++ A E
Sbjct: 57 EAHHLETL------KESSPLGRILAAGLANRHHGRSV-----------MAEAIEDAGRHE 99
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISIL 183
+ L+ LG++++ L+G+LG V+GM+ F +I+ ++ ++ GI E+LI+
Sbjct: 100 AHRLERYLNTLGTIAAISPLLGLLGTVIGMIKVFGAISAEGLGDMAALSGGIAEALITTA 159
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
GL ++IP+ +AY + ++ME A
Sbjct: 160 SGLTIAIPALMAYRYLRGLVDERVVEMEQEAMLLLE 195
>gi|163796014|ref|ZP_02189977.1| MotA/TolQ/ExbB proton channel [alpha proteobacterium BAL199]
gi|159178769|gb|EDP63307.1| MotA/TolQ/ExbB proton channel [alpha proteobacterium BAL199]
Length = 255
Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats.
Identities = 41/213 (19%), Positives = 80/213 (37%), Gaps = 20/213 (9%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLR----RQFREFEQLFWSGQS 68
+F + G V +L S+++ ++I+ K F R R L +G+S
Sbjct: 25 VFEMVTAGGPVV----AVLAAMSVVALAIILVKLWQFAMSRVGDRTTARRALALHRAGRS 80
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+E + +A + A+ G + + + +E++
Sbjct: 81 IEAI--DAAARSRNPVAQVVACAVR--------GTLYRDLPEAMVREEVARLATDRIEDL 130
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGL 186
L ++S L+G+ G VLGM+ F+ + AG + + GI E+L++ +GL
Sbjct: 131 RMYFRPLEVIASVAPLLGLFGTVLGMIEAFRQLEQAGSQVDPSILSGGIWEALLTTAVGL 190
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
V+IP + +ME +
Sbjct: 191 AVAIPVVGILAWLERIVDRLTHEMENVVTQVFT 223
>gi|220934542|ref|YP_002513441.1| MotA/TolQ/ExbB proton channel [Thioalkalivibrio sp. HL-EbGR7]
gi|219995852|gb|ACL72454.1| MotA/TolQ/ExbB proton channel [Thioalkalivibrio sp. HL-EbGR7]
Length = 206
Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats.
Identities = 35/218 (16%), Positives = 86/218 (39%), Gaps = 18/218 (8%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
+F L G + + S+++ ++I+++ + R R+ W +
Sbjct: 1 MFELVKAGGWL----MLPIIACSVVALAIIVERFWSLQQRRVNPRQLVVQIWQMIQAGQL 56
Query: 73 CKSL--KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
+ + L + + + + +D + ++ ++
Sbjct: 57 TEDRLRQVRDGSPLGRVLAAGL-----------INMGHTRDVMKEAIEETGRHVAHDLER 105
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYY-SNNVVSIPGIIESLISILLGLCVS 189
L+ LG++++ L+G+LG V+GM+ F I + GI ++LI+ G+ V+
Sbjct: 106 FLNTLGTIAAITPLLGLLGTVVGMIQVFSVITDVGVGSPGELAGGISQALITTAAGISVA 165
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEG 227
+PS I + F + ++ME + + ++ + E
Sbjct: 166 VPSLIFHRYFRGRVDELVLEMEMESIKLVEVIHGEREA 203
>gi|294792560|ref|ZP_06757707.1| MotA/TolQ/ExbB proton channel family protein [Veillonella sp.
6_1_27]
gi|294456459|gb|EFG24822.1| MotA/TolQ/ExbB proton channel family protein [Veillonella sp.
6_1_27]
Length = 203
Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats.
Identities = 41/218 (18%), Positives = 92/218 (42%), Gaps = 20/218 (9%)
Query: 14 FALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ-SLETV 72
+ LF+ G ++ L + I++ ++ I++ + L+R+ + + +++
Sbjct: 5 WELFLHGGF----VMWPLLVALIITVAIAIERIAYYRQLKREMFALNDALEESEINWQSL 60
Query: 73 CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKL 132
SL++ + A I + + D+ + M+ +A + L
Sbjct: 61 LTSLESKYT---ANISYNLTRVLGQCHDRNV---------LQSKMEDMVAHVYTHASRGL 108
Query: 133 SFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPS 192
+L ++ + L+G+LG V GM+G FQ + G+ E+L++ GLCV+I +
Sbjct: 109 DWLSTIVTIAPLLGLLGTVTGMIGAFQVFGADGAVPTAITGGVGEALVATASGLCVAIVA 168
Query: 193 SIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
+ F + ++E + FS +L G+ +
Sbjct: 169 LCFHAGFTHHVRMTISRLE---DSFSRVLDSYDRGHAA 203
>gi|154253330|ref|YP_001414154.1| MotA/TolQ/ExbB proton channel [Parvibaculum lavamentivorans DS-1]
gi|154157280|gb|ABS64497.1| MotA/TolQ/ExbB proton channel [Parvibaculum lavamentivorans DS-1]
Length = 257
Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats.
Identities = 43/217 (19%), Positives = 87/217 (40%), Gaps = 16/217 (7%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLET 71
S+ +L + G V +L + S++S ++I+ K F + R F +
Sbjct: 43 SLGSLLDKGGPIV----AILLVLSVISAAIILLKIFQFWSAGLSKRAFVEPALDKIESGD 98
Query: 72 VCKSLK--NHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+ SL+ LA + + + + + + + E+ +
Sbjct: 99 LASSLEVLKKQRTPLARAMAAGVRAKMRGDLRD--------EDVASEIVRVGTMEIGSLQ 150
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGLC 187
L +L + + L+G+LG V+GM+ FQS+ AG + + GI +L++ +GL
Sbjct: 151 RYLRWLEVIGNISPLLGLLGTVIGMINAFQSLEEAGTQVDPALLSGGIWVALLTTAVGLI 210
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
V++P+ A N + + M + A L +
Sbjct: 211 VALPAITALNLLEGKIDQVRLSMRDASARVIAALHAR 247
>gi|120437235|ref|YP_862921.1| MotA/TolQ/ExbB family biopolymer transport protein [Gramella
forsetii KT0803]
gi|117579385|emb|CAL67854.1| MotA/TolQ/ExbB family biopolymer transport protein [Gramella
forsetii KT0803]
Length = 233
Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats.
Identities = 37/202 (18%), Positives = 78/202 (38%), Gaps = 20/202 (9%)
Query: 29 TLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFW---SGQSLETVCKSLKNHHNIGLA 85
+L ++ + ++ R + F G ++E+ +
Sbjct: 47 FVLLFAAV---YIYFERLFAIKAASRVDKNFMHQIKDSVQGGNIESAKIRCAQSESP--- 100
Query: 86 AIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLV 145
+ +KG + I+ ++ A E+ ++ + +S L +++ A ++
Sbjct: 101 ---------VARLTEKGISRIGSPLEDINTAIENAGRLEVYKLEKNVSILATIAGAAPMI 151
Query: 146 GILGAVLGMMGFFQSIAGY--YSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDS 203
G LG V+GM+ F +A + GI ++ + + GL V I + I YN + +
Sbjct: 152 GFLGTVIGMVLAFHELATSSGQAQMGALAEGIYTAMTTTVAGLIVGIIAYIGYNHLVVKT 211
Query: 204 KKFAMQMEGFANEFSAILSRQT 225
K QME A +F +L+
Sbjct: 212 DKVVHQMEATAVDFLDLLNEPA 233
>gi|330951998|gb|EGH52258.1| TonB system transport protein ExbB2 [Pseudomonas syringae Cit 7]
Length = 141
Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats.
Identities = 35/129 (27%), Positives = 61/129 (47%), Gaps = 4/129 (3%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLA 85
+I LL IFS+ +W + + K V F L+ Q R+F + FW+ SL++ + L A
Sbjct: 14 AVIWLLVIFSVATWGLALLKGVQFSRLKSQDRKFHKQFWAASSLDSAAQ-LAQEQPGAAA 72
Query: 86 AIFMSAMSEWKK---SCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAG 142
+ ++ + + + I QDR++R + I RE + L+ L S+ S
Sbjct: 73 RVALAGYAAIQVPDGAQANDLSQSINHQDRLERALRQQIVRERRSLETGLAILASIGSTS 132
Query: 143 LLVGILGAV 151
+G+ G V
Sbjct: 133 PFIGLFGTV 141
>gi|15606982|ref|NP_214364.1| TolQ-like protein [Aquifex aeolicus VF5]
gi|2984223|gb|AAC07752.1| TolQ-like protein [Aquifex aeolicus VF5]
Length = 204
Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats.
Identities = 44/202 (21%), Positives = 82/202 (40%), Gaps = 15/202 (7%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLR---RQFREFEQLFWSGQSLETVCKSLKNHHNI 82
++ L + SILSW VII+++VN R E + L G + + +
Sbjct: 13 IVMYPLILLSILSWYVIIERAVNLRVKNFLPRNLTEIKALISRGDYESAL--KISTVVDH 70
Query: 83 GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAG 142
+ E+ K + + R+M+ ++ + +I + L L + +S
Sbjct: 71 PFTKAVSVTLEEYLKGKKEKG--------YLIRLMEEELSALVPKIEKNLPILSTTASVA 122
Query: 143 LLVGILGAVLGMMGFFQ--SIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFI 200
L+G+ G + G++ FQ +I + GI E L++ GL V+IP+ +AY +
Sbjct: 123 PLLGLFGTITGLIKVFQAYAITTQGEAMNLLAKGISEVLVAAATGLGVAIPALLAYWVYK 182
Query: 201 EDSKKFAMQMEGFANEFSAILS 222
++ A E L
Sbjct: 183 AIGNHILDRISEEAREIIHSLE 204
>gi|193213160|ref|YP_001999113.1| MotA/TolQ/ExbB proton channel [Chlorobaculum parvum NCIB 8327]
gi|193086637|gb|ACF11913.1| MotA/TolQ/ExbB proton channel [Chlorobaculum parvum NCIB 8327]
Length = 249
Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats.
Identities = 45/208 (21%), Positives = 91/208 (43%), Gaps = 9/208 (4%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITL--RRQFREFEQLFWSGQSL 69
S+F + G V ++ L + I + ++++ V + EF Q
Sbjct: 32 SMFHALWKGGPIV-SVLMALILMVI---AYVVERIVALNKASGKGNITEFVQSLKQDIDA 87
Query: 70 ETVCKSLK--NHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
V +++ + H LAA+ + + +K +++ ++ A E+
Sbjct: 88 GAVDQAISRCDDHQSSLAAVMRAVLDRYKMLAVHNVTDREKRISEMEKAVEEATVMEMPL 147
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISILLGL 186
+ + L + +++S +VG+LG LGM+ F ++A + + V + GI E+L + LG+
Sbjct: 148 LEKNLVAISTIASISTMVGLLGTTLGMIRAFAAMATSGAPDAVQLSLGISEALFNTALGI 207
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFA 214
I +AYN F KF+ Q++ A
Sbjct: 208 LGGIMGIVAYNVFTNRVDKFSYQIDEAA 235
>gi|330880592|gb|EGH14741.1| biopolymer transport protein ExbB [Pseudomonas syringae pv.
morsprunorum str. M302280PT]
Length = 141
Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats.
Identities = 32/136 (23%), Positives = 59/136 (43%), Gaps = 5/136 (3%)
Query: 21 GLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHH 80
+ V ++ L +FS+LSW++++ KS ++ + Q ++F + FWS L T + +
Sbjct: 7 SMIVPAVLWALIVFSVLSWALLLIKSAQYVRQKSQNKQFTKAFWSAPDLLTAAEHSAQYP 66
Query: 81 NIGLAAIFMSAMSEWK----KSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLG 136
LA I S + I DR++R + I +E + + L
Sbjct: 67 G-ALARIANSGFEAMAVDESPRTTQQLAHTINRSDRLERNLRQQIQKERRALESGQAILA 125
Query: 137 SMSSAGLLVGILGAVL 152
S+ S +G+ G V
Sbjct: 126 SIGSTAPFIGLFGTVW 141
>gi|262066199|ref|ZP_06025811.1| biopolymer transport ExbB protein [Fusobacterium periodonticum ATCC
33693]
gi|291380106|gb|EFE87624.1| biopolymer transport ExbB protein [Fusobacterium periodonticum ATCC
33693]
Length = 203
Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats.
Identities = 43/204 (21%), Positives = 78/204 (38%), Gaps = 19/204 (9%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQF-----REFEQLFWSGQSLETV--CKSLKNHH 80
+ + + I+ I+++ F R E +QL G+ E + S K+
Sbjct: 11 MYFILLMGIVGLYAILERFSYFTLKERNNYSKLPSEAKQLIKEGKIKEAIIYFNSNKSST 70
Query: 81 NIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSS 140
+ L I + E K++ ++ +++ + + L ++
Sbjct: 71 STVLKEILIYGYKENKETLSA-----------LEEKGKEKAIEQIKLLERNMWLLSLAAN 119
Query: 141 AGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKF 199
A L+G+LG V GM+ F SIA + + + GI E+L + GL V+IP I YN F
Sbjct: 120 ASPLLGLLGTVTGMITAFNSIALNGTGDAGILAKGISEALYTTAGGLFVAIPCMIFYNYF 179
Query: 200 IEDSKKFAMQMEGFANEFSAILSR 223
+ +E E
Sbjct: 180 NKRIDLVVTDIEKTCTEMLNYFRE 203
>gi|77919985|ref|YP_357800.1| biopolymer transport protein [Pelobacter carbinolicus DSM 2380]
gi|77546068|gb|ABA89630.1| outer membrane transport energization protein ExbB [Pelobacter
carbinolicus DSM 2380]
Length = 234
Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats.
Identities = 42/199 (21%), Positives = 79/199 (39%), Gaps = 12/199 (6%)
Query: 29 TLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS---LETVCKSLKNHHNIGLA 85
+ + S+++ +II++ + F LR + F + + +
Sbjct: 16 ITIILCSLVAVFIIIERVLAFRALRLKDDRFYHRLRKRAQEGCFDEASALAREERHP--- 72
Query: 86 AIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLV 145
+ M E G + + +++ RE+ + L L +SS L+
Sbjct: 73 --WAVGMVEV--LARLGHAARGASRADLEKTFSHVATREVRRMERFLPTLFLISSISPLL 128
Query: 146 GILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDS 203
G+LG V GM+ FQ+I G ++ V GI E++++ LGL V+IP+ +A+N
Sbjct: 129 GLLGTVAGMIKAFQAIENLGGKVDSSVLAGGIWEAMLTTALGLGVAIPAMVAHNYLQGRV 188
Query: 204 KKFAMQMEGFANEFSAILS 222
M+ F L
Sbjct: 189 HATVADMKEETGIFLDALE 207
>gi|310822689|ref|YP_003955047.1| MotA/TolQ/ExbB proton channel family protein [Stigmatella
aurantiaca DW4/3-1]
gi|309395761|gb|ADO73220.1| MotA/TolQ/ExbB proton channel family protein [Stigmatella
aurantiaca DW4/3-1]
Length = 235
Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats.
Identities = 36/208 (17%), Positives = 83/208 (39%), Gaps = 19/208 (9%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQFR----EFEQLFWSGQSLETVCKSLKNHHN 81
+ +L + SI++ V I++ + + R + G ++
Sbjct: 15 VTMAVLLLASIVALGVAIERIIALWGVSENSRVLGETVHKHLLRGD--LAAARTASERSK 72
Query: 82 IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSA 141
+A IF++ +++ G ++ ++ A+ + L L ++ S
Sbjct: 73 AAVADIFLAGFDRLERARLTGG--------GVESAVERERAQVGLRLRRNLWLLATIGSL 124
Query: 142 GLLVGILGAVLGMMGFFQSI-----AGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAY 196
VG+ G V G+M F+ + +G + GI E+LI+ +G+ V++ + + Y
Sbjct: 125 APFVGLFGTVAGIMRSFKDLGLDVESGGTGGTATVMTGISEALIATAVGILVAVMAMVFY 184
Query: 197 NKFIEDSKKFAMQMEGFANEFSAILSRQ 224
N F + +++ +EF +L +
Sbjct: 185 NYFQARLARVLVELRLLGDEFVELLRER 212
>gi|255012048|ref|ZP_05284174.1| putative transmembrane MotA/TolQ/ExbB proton channel family protein
[Bacteroides fragilis 3_1_12]
gi|313149890|ref|ZP_07812083.1| MotA/TolQ/ExbB proton channel [Bacteroides fragilis 3_1_12]
gi|313138657|gb|EFR56017.1| MotA/TolQ/ExbB proton channel [Bacteroides fragilis 3_1_12]
Length = 270
Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats.
Identities = 46/215 (21%), Positives = 95/215 (44%), Gaps = 12/215 (5%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITL--RRQFREF 59
NN+ L + + G+ V I TLL LS I++ + R +F
Sbjct: 48 NNHPLPG---NFMGTIYKGGVIVPVIQTLLLTVLALS----IERYFALRSAFGRGSLVKF 100
Query: 60 EQLFWSGQSLETV--CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMM 117
S + + + + +A + S + ++++ + + S I + +
Sbjct: 101 VSNIKDALSAGDLRKAQEVCDKQRGSVANVVTSTLRKYEEMENDSSLSKDQKLLAIQKEL 160
Query: 118 DVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GII 176
+ A A EL + + L +G++++ G L+G+LG V+GM+ F ++A S + +++ GI
Sbjct: 161 EEATALELPMMEQNLPIIGTITTLGTLMGLLGTVIGMIRSFAALAAGGSADSMALSQGIS 220
Query: 177 ESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
E+LI+ G+ + I+YN + K ++
Sbjct: 221 EALINTAFGILTGALAVISYNYYTNKIDKLTYSLD 255
>gi|332881157|ref|ZP_08448817.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Capnocytophaga sp. oral taxon 329 str. F0087]
gi|332680906|gb|EGJ53843.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Capnocytophaga sp. oral taxon 329 str. F0087]
Length = 233
Score = 109 bits (274), Expect = 2e-22, Method: Composition-based stats.
Identities = 46/220 (20%), Positives = 93/220 (42%), Gaps = 17/220 (7%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFW---SGQ 67
+SI + + G II +LF+ ++ + +++ + + F +
Sbjct: 26 LSIMDMIIDGGTGNIIIIGVLFLMLGVALYIYFERTFAIKAASQVDKTFMYKIRDCIAAG 85
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
L+ K L N +A + +S K + I++ ++ A E+ +
Sbjct: 86 RLD-AAKMLCVQSNTPVARLIEKGVSRIGKPL-----------EDINKAIENAGTLEVYK 133
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA--GYYSNNVVSIPGIIESLISILLG 185
+ + + L +++ AG ++G LG V+GM+ F +A G + GI ++ + + G
Sbjct: 134 LEKNTAILATIAGAGPMIGFLGTVVGMIMSFHEMATAGGQAEMGALAGGIYTAMATTVAG 193
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
L V I + + YN + + K QME A EF +L+
Sbjct: 194 LIVGIIAYVGYNHLVVKTDKIVHQMEANAVEFLDLLNEPL 233
>gi|262370374|ref|ZP_06063700.1| biopolymer transporter [Acinetobacter johnsonii SH046]
gi|262314716|gb|EEY95757.1| biopolymer transporter [Acinetobacter johnsonii SH046]
Length = 217
Score = 109 bits (274), Expect = 2e-22, Method: Composition-based stats.
Identities = 50/211 (23%), Positives = 103/211 (48%), Gaps = 17/211 (8%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS-GQSLET 71
++ L G + L + SI + ++ +++ FI L++ + L + QS++
Sbjct: 1 MWELVKAGGWL----MLPLVLCSIFTVAISLER---FIRLKKSAILPKDLLLNPAQSVQM 53
Query: 72 VCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEK 131
V LK + ++ + + + G +S + M+ ++E+ + +
Sbjct: 54 VLPKLKQNQDLQATTLG--------RILEAGYQSKAQGEQFARAQMEATASQEIGYLEKN 105
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSI-AGYYSNNVVSIPGIIESLISILLGLCVSI 190
++FLG++S+ L+G+LG VLG++ F I G SN + IPGI ++LI+ G+ ++I
Sbjct: 106 INFLGTLSAVAPLLGLLGTVLGIIESFLMIDIGNSSNPTLMIPGISKALITTAAGMFIAI 165
Query: 191 PSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
P+ AY F +++ ++E + F A L
Sbjct: 166 PALFAYRYFQRLVQEYVAELEQQSTLFHAAL 196
>gi|237737526|ref|ZP_04568007.1| biopolymer transport exbB protein [Fusobacterium mortiferum ATCC
9817]
gi|229419406|gb|EEO34453.1| biopolymer transport exbB protein [Fusobacterium mortiferum ATCC
9817]
Length = 204
Score = 109 bits (274), Expect = 2e-22, Method: Composition-based stats.
Identities = 40/194 (20%), Positives = 84/194 (43%), Gaps = 18/194 (9%)
Query: 17 FMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRR-QFREFEQLF---WSGQSLETV 72
+M G + + +L + SI + ++I+ ++ F R FE+ +++
Sbjct: 4 YMNAGGPL---MWVLLLMSITALTIILDRAFFFFKKEGTHNRNFEKDIIKEVQNGNIDGA 60
Query: 73 CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKL 132
+ N + + C+K D+++ E+ + +L
Sbjct: 61 ISICEKEKNS-----VGYVVKGFLTRCEKNMDFH-----YYDQLLKEIAFDEISSLERRL 110
Query: 133 SFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-VVSIPGIIESLISILLGLCVSIP 191
LG + + +VG+LG V GM+ F+++A + + + + GI E+LI+ GL ++IP
Sbjct: 111 HLLGLIGNMATMVGLLGTVTGMIKAFKNLATFGAGDPTIVAGGISEALITTASGLIIAIP 170
Query: 192 SSIAYNKFIEDSKK 205
+ AYN F + +
Sbjct: 171 TIFAYNIFSKKIEN 184
>gi|224367131|ref|YP_002601294.1| TolQ3 [Desulfobacterium autotrophicum HRM2]
gi|223689847|gb|ACN13130.1| TolQ3 [Desulfobacterium autotrophicum HRM2]
Length = 478
Score = 109 bits (274), Expect = 2e-22, Method: Composition-based stats.
Identities = 48/208 (23%), Positives = 87/208 (41%), Gaps = 19/208 (9%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFW--- 64
+S+ + G V I+ L + ++L +I++K+ F
Sbjct: 268 THRLSLLEQIPKGGPVVWPILA-LAVLAVL---IILEKTFFLARKYLNAAPFMATLKKRI 323
Query: 65 SGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARE 124
+ Q E + L H LA + M K+ ++ + AI RE
Sbjct: 324 AAQDWEGCSQLLARHGKKPLARALSAGMDFRTKTRTD-----------MENALQEAILRE 372
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISIL 183
+ + LS LG +++ L+G+LG V GM+ F +I Y +++ + GI E+L++ +
Sbjct: 373 IPPLERFLSTLGMLAAIAPLMGLLGTVTGMINTFHTITFYGTSDPRMMSGGISEALVTTM 432
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQME 211
LGLCV+IP + + + ME
Sbjct: 433 LGLCVAIPIMLCHTLLSRWVETMIATME 460
>gi|110833914|ref|YP_692773.1| MotA/TolQ/ExbB proton channel family protein [Alcanivorax
borkumensis SK2]
gi|110647025|emb|CAL16501.1| MotA/TolQ/ExbB proton channel family protein [Alcanivorax
borkumensis SK2]
Length = 209
Score = 109 bits (274), Expect = 2e-22, Method: Composition-based stats.
Identities = 36/218 (16%), Positives = 88/218 (40%), Gaps = 20/218 (9%)
Query: 15 ALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE---QLFWSGQSLET 71
L G + + I S+++ ++++++ + + Q L
Sbjct: 3 DLVQSGGWM----MLPILICSVVALAIVVERFWTLRPSKLAPADTVPQVQALLKRGLLNE 58
Query: 72 VCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEK 131
+K + L I + ++ + + + + + + E+ +
Sbjct: 59 -SNLVKLRDSSPLGRILATGLANARHGR-----------EIMKESIQESATGVVHELEKF 106
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV-SIPGIIESLISILLGLCVSI 190
LS LGS+++ L+G+LG V+GM+ F +I + + + GI ++L++ GL V+I
Sbjct: 107 LSTLGSIAAITPLLGLLGTVVGMIDVFAAIMIHGTGDAAQLAGGISQALLTTAAGLVVAI 166
Query: 191 PSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
P+ + F+ ++ +++E A ++ E
Sbjct: 167 PAIFFHRFFVRRVEEITVELEQSAVHVVDLVHGDREAE 204
>gi|319786919|ref|YP_004146394.1| MotA/TolQ/ExbB proton channel [Pseudoxanthomonas suwonensis 11-1]
gi|317465431|gb|ADV27163.1| MotA/TolQ/ExbB proton channel [Pseudoxanthomonas suwonensis 11-1]
Length = 220
Score = 109 bits (274), Expect = 2e-22, Method: Composition-based stats.
Identities = 40/223 (17%), Positives = 91/223 (40%), Gaps = 22/223 (9%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRR---QFREFEQLFWSGQSL 69
++ L G + L + +++ ++II++ + + + E + + + L
Sbjct: 1 MWELVKAGGWP----MLPLILLGLVALAIIIERLWSLRRVEVMPPRLGEEVRNWAARGEL 56
Query: 70 ETV-CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
E +SL+ + +G + + + + I ++ + +
Sbjct: 57 EPAHIESLRRNSPLGALLAAALDVRQRPR-------------ELIRERLEDTGRHLVHRM 103
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
L+ LG+++SAG L+G+LG V+GM+ F I + +V GI ++L+ G+
Sbjct: 104 ERFLNALGTIASAGPLLGLLGTVVGMIQMFLGILDHGLGDVNQLAGGIGKALVCTATGMI 163
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
V+IP+ + F + ++ME A + R +
Sbjct: 164 VAIPALAFHRFFRSRIAGYVIEMEEEATALLDAIERSPAATPA 206
>gi|323698829|ref|ZP_08110741.1| MotA/TolQ/ExbB proton channel [Desulfovibrio sp. ND132]
gi|323458761|gb|EGB14626.1| MotA/TolQ/ExbB proton channel [Desulfovibrio desulfuricans ND132]
Length = 481
Score = 109 bits (274), Expect = 2e-22, Method: Composition-based stats.
Identities = 43/192 (22%), Positives = 78/192 (40%), Gaps = 17/192 (8%)
Query: 41 VIIQKSVNFITLR---RQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKK 97
V+ K R R F + W + + LK+ A + + A
Sbjct: 300 VVFYKGARLFLARPCPRDFALRLRTAWDADGPSGLTRLLKSLPRTPAARVLLWA------ 353
Query: 98 SCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGF 157
+P + D+ + EL + L F+ M++ L+G+LG V GM+
Sbjct: 354 -------APDADPELRDKRLQEGFLAELHRLESGLGFIAVMAAVAPLLGLLGTVTGMIDS 406
Query: 158 FQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANE 216
FQ++ + + N + GI E+LI+ GL V+IP+ + + + + A ME
Sbjct: 407 FQAVTVFGTANPRIMSSGISEALITTQAGLGVAIPAMLLHQFLKQRVQGLASDMEQQCAA 466
Query: 217 FSAILSRQTEGN 228
F A+L+ + +
Sbjct: 467 FQALLAANPDKD 478
>gi|89092891|ref|ZP_01165843.1| MotA/TolQ/ExbB proton channel family protein [Oceanospirillum sp.
MED92]
gi|89082916|gb|EAR62136.1| MotA/TolQ/ExbB proton channel family protein [Oceanospirillum sp.
MED92]
Length = 206
Score = 109 bits (273), Expect = 3e-22, Method: Composition-based stats.
Identities = 33/226 (14%), Positives = 89/226 (39%), Gaps = 30/226 (13%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS------- 65
+ + G + + S+++ ++ +++ + W+
Sbjct: 1 MLEILQSGGWL----MLPIMACSVIALAICLERLWTLRPSKVAPPGLLAEVWALIKQRNI 56
Query: 66 -GQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARE 124
+ L+ + + L I ++ ++ + ++ + + A +
Sbjct: 57 TSERLKEL------KRSSPLGQILVAGLN-----------NASHGREIMKESIQEAAGQV 99
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISIL 183
+ ++ L+ LG++++ L+G+LG V+GM+ F I + N V GI ++LI+
Sbjct: 100 VHDLERFLNPLGTIAAITPLLGLLGTVIGMIDVFTEIMVQGTGNANVLAGGISQALITTA 159
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNI 229
GL ++IP+ I + F + ME + ++ + + ++
Sbjct: 160 TGLTIAIPALIFHRFFQRRIDSLVVTMEQETVKLLEVMHGERDVDV 205
>gi|282890323|ref|ZP_06298851.1| hypothetical protein pah_c016o025 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|281499705|gb|EFB41996.1| hypothetical protein pah_c016o025 [Parachlamydia acanthamoebae str.
Hall's coccus]
Length = 241
Score = 109 bits (273), Expect = 3e-22, Method: Composition-based stats.
Identities = 42/190 (22%), Positives = 78/190 (41%), Gaps = 10/190 (5%)
Query: 45 KSVNFITLRRQFREFEQLFWSGQ--SLETVCKSLKNHHNIGLAAIFMSAMSE-------W 95
K + T F QLF S + L + + L + E +
Sbjct: 45 KVLQARTAESSASNFYQLFQSNKYSPLNIEYSGISENPFYSLYSTMKKYTLEILNKNRRF 104
Query: 96 KKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMM 155
+ + I+ + + ++++++ + L FL ++ S +G+LG V G++
Sbjct: 105 AAQENASSYLSKADLAFIENHVFSEVTQQIKQLEKNLFFLSTIVSLAPFLGLLGTVWGIL 164
Query: 156 GFFQSIAGYYSNNVVSI-PGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFA 214
F + G + + G+ +L + +LGL +IP+ + YN F MQ+EGFA
Sbjct: 165 MTFSELHGNAAGTHQMVLGGLSMALATTVLGLIDAIPALVGYNYLKNRFHDFEMQLEGFA 224
Query: 215 NEFSAILSRQ 224
NE A + Q
Sbjct: 225 NEILASVEMQ 234
>gi|117926836|ref|YP_867453.1| MotA/TolQ/ExbB proton channel [Magnetococcus sp. MC-1]
gi|117610592|gb|ABK46047.1| outer membrane transport energization protein ExbB [Magnetococcus
sp. MC-1]
Length = 203
Score = 109 bits (273), Expect = 3e-22, Method: Composition-based stats.
Identities = 48/200 (24%), Positives = 91/200 (45%), Gaps = 18/200 (9%)
Query: 14 FALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVC 73
F + V+ + LL + S+LSWS+I+ K+V TL + R + VC
Sbjct: 6 FGWWQDADGVVRTVFMLLLLVSLLSWSIILYKAVQLSTLVHRMR----------TCYLVC 55
Query: 74 KSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLS 133
+ K + A++ + ++++ +R++ + + LS
Sbjct: 56 QQGKMDASHPDLALYQPLLDFYQRNPSAQHSDQ-------ERLLGQLLKTRRLHLENGLS 108
Query: 134 FLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIPS 192
FL S+S+A +G+LG V G+M Q + S ++ + G + E+L++ LGL +IP+
Sbjct: 109 FLASVSAAAPFIGLLGTVWGIMHALQGLGSENSASLALVAGPVAEALVATALGLFAAIPA 168
Query: 193 SIAYNKFIEDSKKFAMQMEG 212
+ YN + K+ +EG
Sbjct: 169 LLGYNLLVRLLKRLMGYVEG 188
>gi|319793940|ref|YP_004155580.1| mota/tolq/exbb proton channel [Variovorax paradoxus EPS]
gi|315596403|gb|ADU37469.1| MotA/TolQ/ExbB proton channel [Variovorax paradoxus EPS]
Length = 210
Score = 109 bits (273), Expect = 3e-22, Method: Composition-based stats.
Identities = 42/219 (19%), Positives = 90/219 (41%), Gaps = 22/219 (10%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLR----RQFREFEQLFWSGQS 68
+F++ + G I L S+++ +++I++ + T++ + E +
Sbjct: 1 MFSIIVAAGWP----IWPLLACSVIALALVIERFTSLKTVKVLPPKLLDETITVSRGAIP 56
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
V L+ + +G + + + +P +D + M+ + ++
Sbjct: 57 GPDVVTKLERNSMLG--QVLAAGLRALN-------ANPRCTEDDLRAAMEASGRTIAHKL 107
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI-----AGYYSNNVVSIPGIIESLISIL 183
L L +++SA L+G+LG V+GM+ F S A N GI +L +
Sbjct: 108 ERYLPALATIASAAPLLGLLGTVIGMIEIFGSQSPVNGAVGSGNPAQLAHGISIALYNTA 167
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
GL V+IP+ I + F ++ + +E F+ L+
Sbjct: 168 FGLIVAIPTLIFWRYFRSRVDEYLLNLELSGERFARHLN 206
>gi|62185541|ref|YP_220326.1| putative transport protein TolQ [Chlamydophila abortus S26/3]
gi|62148608|emb|CAH64380.1| putative transport protein TolQ [Chlamydophila abortus S26/3]
Length = 232
Score = 109 bits (272), Expect = 4e-22, Method: Composition-based stats.
Identities = 39/218 (17%), Positives = 82/218 (37%), Gaps = 10/218 (4%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKS---VNFITLRRQFREFEQLFWSGQSL 69
I + + L + I L I S+ +W+V+ QK F+ + ++F
Sbjct: 9 IIQAYTEADLFGRGIFFSLLILSLCTWTVLHQKLAIQKKFLKSGKSLKDFLIKNRHAPLS 68
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEW-----KKSCDKGARSPIGIQDRIDRMMDVAIARE 124
+ L + L E +++ D G + ++ ++ + +
Sbjct: 69 LEIHPELNPFAD--LYFTIKRGTLELLDKNRQQAPDHGPVLSVEDIQSLETLLGAVMPKY 126
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILL 184
+ E + S +G+LG V G++ F I+ + G+ +L + ++
Sbjct: 127 RALMHENNFIPATTISLAPFLGLLGTVWGILTAFSHISSGEVGGTAMMEGLATALGTTIV 186
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
GL V+IPS I +N S + +++E A +
Sbjct: 187 GLFVAIPSLIGFNYLKAHSSRLILEIEQTAYLLLNSIE 224
>gi|254429386|ref|ZP_05043093.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Alcanivorax sp. DG881]
gi|196195555|gb|EDX90514.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Alcanivorax sp. DG881]
Length = 205
Score = 109 bits (272), Expect = 4e-22, Method: Composition-based stats.
Identities = 35/205 (17%), Positives = 86/205 (41%), Gaps = 16/205 (7%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQFREFE---QLFWSGQSLETVCKSLKNHHNIGL 84
+ + I S+++ ++++++ + + Q L +K + L
Sbjct: 8 MLPILICSVVALAIVVERFWTLRPSKLAPADTVPQVQTLLKRGLLNEG-NLVKLRDSSPL 66
Query: 85 AAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLL 144
I + ++ + D + + + + E+ + LS LGS+++ L
Sbjct: 67 GRILATGLANARHGRDI-----------MKESIQESATGVVHELEKFLSTLGSIAAITPL 115
Query: 145 VGILGAVLGMMGFFQSIAGYYSNNVV-SIPGIIESLISILLGLCVSIPSSIAYNKFIEDS 203
+G+LG V+GM+ F +I + + + GI ++L++ GL V+IP+ + F+
Sbjct: 116 LGLLGTVVGMIDVFAAIMIHGTGDAAQLAGGISQALLTTAAGLVVAIPAIFFHRFFVRRV 175
Query: 204 KKFAMQMEGFANEFSAILSRQTEGN 228
++ +++E A ++ E
Sbjct: 176 EEITVELEQSAVHVVDLVHGDREAE 200
>gi|254444893|ref|ZP_05058369.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Verrucomicrobiae bacterium DG1235]
gi|198259201|gb|EDY83509.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Verrucomicrobiae bacterium DG1235]
Length = 469
Score = 109 bits (272), Expect = 4e-22, Method: Composition-based stats.
Identities = 49/211 (23%), Positives = 84/211 (39%), Gaps = 14/211 (6%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLET 71
++ + G I +L SIL V + K ++ R Q E +
Sbjct: 262 TLTEHIAKGGWVGYAI-LILGAISIL---VALYKLIDLRGNRIQTPE---------DIRA 308
Query: 72 VCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEK 131
+ +S N + S G + Q+ + M+ I R +
Sbjct: 309 IAQSAAKGANEEANSKIGSKTGPIANMLVLGIEFSMTSQETLLDAMESCILRHRPRLERF 368
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISILLGLCVSI 190
L L + ++ L+G+LG V+GM+ F I + + + S+ GI E+L++ LGL V+I
Sbjct: 369 LPILATTAAVAPLMGLLGTVVGMIKTFTLIEVFGTGDAKSLSSGISEALVTTELGLIVAI 428
Query: 191 PSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
P+ I + F + ME A +FS L
Sbjct: 429 PALIFHGIFTRIMRSRLGTMEQVAADFSRHL 459
>gi|293606239|ref|ZP_06688602.1| MotA/TolQ/ExbB proton channel family domain protein [Achromobacter
piechaudii ATCC 43553]
gi|292815386|gb|EFF74504.1| MotA/TolQ/ExbB proton channel family domain protein [Achromobacter
piechaudii ATCC 43553]
Length = 213
Score = 109 bits (272), Expect = 4e-22, Method: Composition-based stats.
Identities = 33/214 (15%), Positives = 79/214 (36%), Gaps = 21/214 (9%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITL----RRQFREFEQLFWSGQS 68
+ ++ + G I L S+L ++I ++ ++ R + + + Q
Sbjct: 4 LLSILREAGWP----IWPLLATSVLGLALIFERFLSLRRSLILPRGLNDQVVDMLRNRQD 59
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
L+ + +G ++E + + + R + ++
Sbjct: 60 TPEAINRLERNSPLG------RVLAEVMRHRHLPREELRNVVEDTGRAV-------AHDL 106
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCV 188
+ + +G+++ L+G+ G V+GM+ F S + GI +L + G+ +
Sbjct: 107 SRYIPAIGTIAVVAPLMGLFGTVVGMIEIFGSYTPGGGDPAQLARGISIALYNTGFGILI 166
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
+IP+ IA+ + ME A+ +S
Sbjct: 167 AIPAMIAHRYLRSRVDNYLSAMEQSASRLVRAVS 200
>gi|121594645|ref|YP_986541.1| MotA/TolQ/ExbB proton channel [Acidovorax sp. JS42]
gi|222110753|ref|YP_002553017.1| mota/tolq/exbb proton channel [Acidovorax ebreus TPSY]
gi|120606725|gb|ABM42465.1| MotA/TolQ/ExbB proton channel [Acidovorax sp. JS42]
gi|221730197|gb|ACM33017.1| MotA/TolQ/ExbB proton channel [Acidovorax ebreus TPSY]
Length = 212
Score = 109 bits (272), Expect = 4e-22, Method: Composition-based stats.
Identities = 46/222 (20%), Positives = 85/222 (38%), Gaps = 24/222 (10%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLR----RQFREFEQLFWSGQS 68
+ ++ G I L SIL+ +++ ++ V T R + E +
Sbjct: 1 MLSIIQAAGWP----IWPLIACSILALALVFERFVALKTARVAPPKLLDEAISVSSKSIP 56
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
V L N L + S + +P + + M+ A +
Sbjct: 57 SPDVVNQLAQ--NSALGEVLASGLRTLN-------SNPQSTEADVRAAMEGAGRAVAHRL 107
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQS-------IAGYYSNNVVSIPGIIESLIS 181
+ L+ L +++SA L+G+LG V+GM+ F S A N GI +L +
Sbjct: 108 EKYLNALATIASAAPLLGLLGTVIGMIEIFGSQAGTGAVGATGGGNPAQLAHGISIALYN 167
Query: 182 ILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
GL V+IP+ I + F + + +E + +F ++R
Sbjct: 168 TAFGLIVAIPALIFWRYFRSRVDAYLLTLELASEQFVRHINR 209
>gi|254445128|ref|ZP_05058604.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Verrucomicrobiae bacterium DG1235]
gi|198259436|gb|EDY83744.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Verrucomicrobiae bacterium DG1235]
Length = 462
Score = 109 bits (272), Expect = 4e-22, Method: Composition-based stats.
Identities = 50/219 (22%), Positives = 89/219 (40%), Gaps = 14/219 (6%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N +A SI + G+ I +L LS +V K+V +L + F
Sbjct: 251 NAMAIAATKESILDHIGKGGI---WIYPILGFA-FLSLAVAAFKTVELSSLPKPKEGF-- 304
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
L V L N G A +A K +G + + ++ ++ ++
Sbjct: 305 -------LSEVLSKLANRDKEGAAHAANTASGPMGKMIQQGVKYSDHDPELVEEILYESM 357
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLI 180
++ L F+ ++ L+G+LG V GM+ F I + + + S+ GI E+LI
Sbjct: 358 VDTQPKVMRLLPFISVTAAVAPLLGLLGTVTGMINTFNRIKIFGTGDAKSLSGGISEALI 417
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
+ GL V+IP+ + Y +K + +ME + F
Sbjct: 418 TTEFGLIVAIPALLLYAILSRKAKGYLARMEKMSISFVN 456
>gi|239815624|ref|YP_002944534.1| MotA/TolQ/ExbB proton channel [Variovorax paradoxus S110]
gi|239802201|gb|ACS19268.1| MotA/TolQ/ExbB proton channel [Variovorax paradoxus S110]
Length = 210
Score = 109 bits (272), Expect = 4e-22, Method: Composition-based stats.
Identities = 44/219 (20%), Positives = 92/219 (42%), Gaps = 22/219 (10%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLR----RQFREFEQLFWSGQS 68
+F++ + G I L SI++ +++I++ + T+R + E +
Sbjct: 1 MFSIIVAAGWP----IWPLLACSIIALALVIERFTSLKTVRVLPPKLLDEAITVSHGSVP 56
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
V L+ + +G + + + +P +D + M+ + ++
Sbjct: 57 GPDVVTKLERNSMLG--QVLAAGLRALN-------ANPRCTEDDLRAAMEASGRTVAHKL 107
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA-GYYS----NNVVSIPGIIESLISIL 183
L L +++SA L+G+LG V+GM+ F S + G + N GI +L +
Sbjct: 108 ERYLPALATIASAAPLLGLLGTVIGMIEIFGSQSPGSGAVGSGNPAQLAHGISIALYNTA 167
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
GL V+IP+ I + F ++ + +E F+ L+
Sbjct: 168 FGLIVAIPTLIFWRYFRSRVDEYLLNLELSGERFARHLN 206
>gi|329895073|ref|ZP_08270818.1| MotA/TolQ/ExbB proton channel family protein [gamma proteobacterium
IMCC3088]
gi|328922518|gb|EGG29856.1| MotA/TolQ/ExbB proton channel family protein [gamma proteobacterium
IMCC3088]
Length = 213
Score = 109 bits (272), Expect = 4e-22, Method: Composition-based stats.
Identities = 37/213 (17%), Positives = 87/213 (40%), Gaps = 14/213 (6%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+ + + G + + + S+++ ++ I++ + + ++
Sbjct: 1 MDMLEIVTAGGWL----MIPILLSSVIALAICIERLIALKPSK---------VAPAGLVQ 47
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
T+ + +K+ + + S G + +D + + A ++ + E+
Sbjct: 48 TLFQQIKSGQMNAEKLRALKSSSHLGHILAAGLMNAKAGRDIMKESIQDAGSQVVHELER 107
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVS 189
L+ LG++++ L+G+LG V+GM+ F I + N GI ++LI+ GL V+
Sbjct: 108 FLNTLGTIAAIAPLMGLLGTVIGMISVFTEIVTQGTGNAGALAGGISQALITTAAGLTVA 167
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
IP+ + + ++ME AN L
Sbjct: 168 IPALVMHRYLQGRVDAIVVRMEQDANRLVDALH 200
>gi|313672600|ref|YP_004050711.1| mota/tolq/exbb proton channel [Calditerrivibrio nitroreducens DSM
19672]
gi|312939356|gb|ADR18548.1| MotA/TolQ/ExbB proton channel [Calditerrivibrio nitroreducens DSM
19672]
Length = 203
Score = 109 bits (272), Expect = 5e-22, Method: Composition-based stats.
Identities = 36/213 (16%), Positives = 90/213 (42%), Gaps = 20/213 (9%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ---LFWSGQSL 69
+F + + G+ + + + S++S + +++ + F LF + +
Sbjct: 1 MFEIIQKGGIM----MYPIILLSVISLGIFLERLFVLRVSNFVPKIFLDKLSLFLAKKDF 56
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
E + + + + + R+ ++ A + E++ +
Sbjct: 57 EGAIQLCEADRSS------------IARIAKDIVNNVDLPVSRLTEFVEEAGSFEVQRLE 104
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCV 188
L L +++S L+G LG VLGM+ F +A + N+ ++ GI +L++ GL V
Sbjct: 105 RFLPTLQTVASLAPLLGFLGTVLGMIQTFMVMANQGNANIQALSGGIAVALLTTAAGLFV 164
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
++P+ I Y+ + K ++++E ++ ++
Sbjct: 165 AVPTVIFYHIIRHRADKISLELEKATSQIMNLI 197
>gi|227825115|ref|ZP_03989947.1| predicted protein [Acidaminococcus sp. D21]
gi|226905614|gb|EEH91532.1| predicted protein [Acidaminococcus sp. D21]
Length = 217
Score = 108 bits (271), Expect = 5e-22, Method: Composition-based stats.
Identities = 43/226 (19%), Positives = 90/226 (39%), Gaps = 21/226 (9%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
M + S + F++ G ++ L + SI + +V I + + F + + F
Sbjct: 1 MQPFA------SGLSYFVRGGW----VMYPLLVCSIAAVTVGINRYLFFKK-KDSGKVFT 49
Query: 61 QLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVA 120
+ F C ++N+ G + S E K + ++ +
Sbjct: 50 EKF---------CTLVENNDWEGAKKLADSTEGEIAKLATI-VMDKHENYEYLENFISYR 99
Query: 121 IARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLI 180
R +++ + L+ L + + ++G+LG V GMMG F + + + G+ E+LI
Sbjct: 100 AERAMDKFEKNLALLNIIITLAPVLGLLGTVTGMMGSFSKLVERGQDPMAVTAGLAEALI 159
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+ + GL +SI + F K + +E +N + ++ E
Sbjct: 160 TTVFGLVISIIAVCILGYFERRMKSITLSIEEMSNTLLEAVRKKCE 205
>gi|256820802|ref|YP_003142081.1| MotA/TolQ/ExbB proton channel [Capnocytophaga ochracea DSM 7271]
gi|256582385|gb|ACU93520.1| MotA/TolQ/ExbB proton channel [Capnocytophaga ochracea DSM 7271]
Length = 234
Score = 108 bits (271), Expect = 5e-22, Method: Composition-based stats.
Identities = 47/228 (20%), Positives = 92/228 (40%), Gaps = 17/228 (7%)
Query: 3 NYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQL 62
+ +SI L + G+ II +LF+ ++ + ++ + + F
Sbjct: 19 PVAVQEKTLSIMELILDGGMGSIIIIGILFVMLAVALFLYFERLFAIKAASKMDKTFMYK 78
Query: 63 FW---SGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDV 119
S L+ K L N +A + +S K + I++ ++
Sbjct: 79 IRDCISAGRLD-AAKMLCVQSNTPVARLIEKGVSRIGKPL-----------EDINKAIEN 126
Query: 120 AIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA--GYYSNNVVSIPGIIE 177
A E+ + + + L +++ AG ++G LG V+GM+ F +A G + GI
Sbjct: 127 AGTLEVYNLEKNTAILATIAGAGPMIGFLGTVVGMIMSFHEMASAGGQAEMGSLASGIYT 186
Query: 178 SLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
++ + + GL V I + + YN + + K ME A EF +L+
Sbjct: 187 AMATTVAGLIVGIIAYVGYNHLVVKTDKVVHLMEANAVEFLDLLNEPL 234
>gi|120611235|ref|YP_970913.1| MotA/TolQ/ExbB proton channel [Acidovorax citrulli AAC00-1]
gi|120589699|gb|ABM33139.1| MotA/TolQ/ExbB proton channel [Acidovorax citrulli AAC00-1]
Length = 208
Score = 108 bits (271), Expect = 5e-22, Method: Composition-based stats.
Identities = 43/218 (19%), Positives = 81/218 (37%), Gaps = 20/218 (9%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLR----RQFREFEQLFWSGQS 68
+ ++ G I L SIL+ +++ ++ T + + E + G
Sbjct: 1 MLSIIQAAGWP----IWPLIACSILALALVAERFATLKTTKVVPPKLLDEAISVSSRGLP 56
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
V L N L + S + + R + + +
Sbjct: 57 TPDVVNQLAQ--NSALGEVLASGLRTLNSHPQSSEADVRAAMEGTGRAV-------AQRL 107
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYS---NNVVSIPGIIESLISILLG 185
+ L+ L +++SA L+G+LG V+GM+ F S + N GI +L + G
Sbjct: 108 EKYLNALATIASAAPLLGLLGTVIGMIEIFGSQGSSATGQGNPAQLAHGISIALYNTAFG 167
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
L V+IP+ I + F + + +E + +F L R
Sbjct: 168 LIVAIPTLIFWRYFRSRVDAYLLTLELASEQFVRHLLR 205
>gi|242277831|ref|YP_002989960.1| MotA/TolQ/ExbB proton channel [Desulfovibrio salexigens DSM 2638]
gi|242120725|gb|ACS78421.1| MotA/TolQ/ExbB proton channel [Desulfovibrio salexigens DSM 2638]
Length = 196
Score = 108 bits (271), Expect = 5e-22, Method: Composition-based stats.
Identities = 46/196 (23%), Positives = 90/196 (45%), Gaps = 12/196 (6%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLA 85
I+ LF+ SI S +V+ ++ F T R F + L + + H+ +
Sbjct: 9 LIMWPLFLLSIASLAVMGERFFVFSTNR---------FPKAERLNEIVNLARQHNTDKIL 59
Query: 86 AIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLV 145
++ + K + + + + + +A L + +L FL ++++A L+
Sbjct: 60 SLVEETSPLYLKIFNALFSQLPNREKKHE--VQLAGEEILFSLNRRLDFLATVATAAPLI 117
Query: 146 GILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSK 204
G+LG VLGM+ F ++ + ++ + GI ++L++ GL V+IP+ IA+ F +
Sbjct: 118 GLLGTVLGMIQAFSRLSASGNVDITMLAGGIWQALLTTAAGLSVAIPALIAHRWFCRQHE 177
Query: 205 KFAMQMEGFANEFSAI 220
K A M+ AN I
Sbjct: 178 KAAYAMQHTANMLLEI 193
>gi|163856981|ref|YP_001631279.1| biopolymer transport protein [Bordetella petrii DSM 12804]
gi|163260709|emb|CAP43011.1| biopolymer transport protein [Bordetella petrii]
Length = 206
Score = 108 bits (271), Expect = 6e-22, Method: Composition-based stats.
Identities = 36/210 (17%), Positives = 80/210 (38%), Gaps = 21/210 (10%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITL----RRQFREFEQLFWSGQS 68
+ ++F + G I L SIL ++I+++ ++ R + ++ +GQ
Sbjct: 1 MLSIFREAGWP----IWPLLATSILGLALIVERLLSLRRGLILPRGLPEQVLEMQRNGQD 56
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
L+ + +G ++E + + + + R + ++
Sbjct: 57 TPQALARLERNSPLG------RVLAEVLRQRHQPHDLQRAAIEDVGRAV-------AHDL 103
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCV 188
+ LG+++ L+G+ G V+GM+ F S + GI +L + G+ +
Sbjct: 104 NRYIPALGTVAVIAPLMGLFGTVVGMIEIFGSYTPSGGDPAQLARGISIALYNTAFGILI 163
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFS 218
+IP+ IA+ ME A +
Sbjct: 164 AIPAMIAHRYLRGRVDGLLNAMEQIAARVA 193
>gi|291534050|emb|CBL07163.1| Biopolymer transport proteins [Megamonas hypermegale ART12/1]
Length = 222
Score = 108 bits (270), Expect = 6e-22, Method: Composition-based stats.
Identities = 36/208 (17%), Positives = 84/208 (40%), Gaps = 20/208 (9%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITL---RRQFREFEQLFWSGQ 67
IS LF G ++ L SIL ++ I++ + + + + +
Sbjct: 23 ISALELFHHGGW----VMYPLLACSILVVAIGIERFIYYKRTCGDNKDMAQQILALAKER 78
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + K N+ ++ + + +++ P+ +++ + I+
Sbjct: 79 NWQETEKVCANNRCF-VSDVLAIGLK-YRE-------CPMSMKE----SFEEYISVRANG 125
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLC 187
+ L++L ++ + L+G+LG V+GM+ F + N + G+ E+LI+ GLC
Sbjct: 126 LKRNLNYLDTIVTMAPLLGLLGTVVGMISSFNVLDVAGDNPALITGGVGEALIATATGLC 185
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFAN 215
V++ + I ++ F +E
Sbjct: 186 VAVLALIVHSYFSNRLDSVLTDVENVCT 213
>gi|83814527|ref|YP_445708.1| putative biopolymer transport protein [Salinibacter ruber DSM
13855]
gi|83755921|gb|ABC44034.1| putative biopolymer transport protein [Salinibacter ruber DSM
13855]
Length = 230
Score = 108 bits (270), Expect = 6e-22, Method: Composition-based stats.
Identities = 35/188 (18%), Positives = 70/188 (37%), Gaps = 17/188 (9%)
Query: 43 IQKSVNFITLRRQFREFEQL---FWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSC 99
+++ + F ++E + + N+ + I + +
Sbjct: 45 VERLITIRQAASDPEAITDRVREFVRSGNVEAAIQYCEE-KNVPITRILQQGLERLGRPI 103
Query: 100 DKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQ 159
+ I + A E ++ ++ + L S++ ++G G V+GM+ FQ
Sbjct: 104 SE-----------IQDAVQAAGKHETFDLEKRTNLLASIAGIAPMLGFFGTVVGMIRAFQ 152
Query: 160 SIAGYYSN--NVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEF 217
I N V GI E+LI+ GL V I + +YN + ++ + ME A +F
Sbjct: 153 QIQNLQGNVNPSVLAGGIWEALITTAAGLLVGILALFSYNYLMGRIRRLSNDMERSATDF 212
Query: 218 SAILSRQT 225
+L
Sbjct: 213 IDLLQEPV 220
>gi|29348078|ref|NP_811581.1| MotA/TolQ/ExbB proton channel [Bacteroides thetaiotaomicron
VPI-5482]
gi|253572580|ref|ZP_04849982.1| MotA/TolQ/ExbB proton channel [Bacteroides sp. 1_1_6]
gi|298387768|ref|ZP_06997318.1| MotA/TolQ/ExbB proton channel family protein [Bacteroides sp.
1_1_14]
gi|29339981|gb|AAO77775.1| MotA/TolQ/ExbB proton channel [Bacteroides thetaiotaomicron
VPI-5482]
gi|251837995|gb|EES66084.1| MotA/TolQ/ExbB proton channel [Bacteroides sp. 1_1_6]
gi|298259373|gb|EFI02247.1| MotA/TolQ/ExbB proton channel family protein [Bacteroides sp.
1_1_14]
Length = 265
Score = 108 bits (270), Expect = 6e-22, Method: Composition-based stats.
Identities = 41/217 (18%), Positives = 93/217 (42%), Gaps = 12/217 (5%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITL--RRQFRE 58
MNN +++ + G+ V I TLL LS I++ + + +
Sbjct: 41 MNNDP-NNHPLNMLGTIYKGGVIVPVIQTLLLTVLALS----IERFFALRSAFGKGSLAK 95
Query: 59 FEQLFW---SGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDR 115
F + L+ + + + +A + + + ++++ A I +
Sbjct: 96 FVANIKEALAAGDLKKA-QEICDKQRGSVANVVTATLRKYEEMEKNTALPKEQKLLAIQK 154
Query: 116 MMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-G 174
++ A A E+ + + L + ++++ G L+G+LG V+GM+ F +++ + +++ G
Sbjct: 155 ELEEATALEMPMMQQNLPIIATITTLGTLMGLLGTVIGMIRSFAALSAGGGADSMALSQG 214
Query: 175 IIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
I E+LI+ G+ + I+YN F K ++
Sbjct: 215 ISEALINTAFGILTGALAVISYNYFTNKIDKLTYGLD 251
>gi|194335847|ref|YP_002017641.1| MotA/TolQ/ExbB proton channel [Pelodictyon phaeoclathratiforme
BU-1]
gi|194308324|gb|ACF43024.1| MotA/TolQ/ExbB proton channel [Pelodictyon phaeoclathratiforme
BU-1]
Length = 248
Score = 108 bits (270), Expect = 7e-22, Method: Composition-based stats.
Identities = 42/209 (20%), Positives = 90/209 (43%), Gaps = 11/209 (5%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITL--RRQFREFEQLFWS---G 66
SIF + G V ++ L + I + I+++ + + EF +
Sbjct: 32 SIFHAIWKGGPVV-SVLMALILMLI---AYIVERIIALNKASGKGNIPEFVRSLKQDIDN 87
Query: 67 QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
S++ +H + LAA+ + + +KK +++ ++ A E+
Sbjct: 88 GSIDQAIAKCDDHQSS-LAAVLRTVLDRYKKLVQHNVTDREKKISEMEKAVEEATIMEMP 146
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISILLG 185
+ + L + +++S +VG+LG LGM+ F ++A + + V + GI E+L + +G
Sbjct: 147 LLEKNLVAISTIASISTMVGLLGTTLGMIRAFAAMATSGAPDAVQLSLGISEALFNTAIG 206
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFA 214
+ I + YN F +F+ ++ A
Sbjct: 207 ILGGIMGIVTYNVFTSRVDRFSYMIDEAA 235
>gi|167564101|ref|ZP_02357017.1| MotA/TolQ/ExbB proton channel family protein [Burkholderia
oklahomensis EO147]
Length = 122
Score = 108 bits (270), Expect = 7e-22, Method: Composition-based stats.
Identities = 27/102 (26%), Positives = 47/102 (46%), Gaps = 1/102 (0%)
Query: 121 IARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESL 179
+ + L S+ S VG+LG V G+ SIA + ++ G + E+L
Sbjct: 1 MRTSQRRLEFGQVLLASIGSTAPFVGLLGTVWGIYHALGSIAASGQAQIENVAGPVGEAL 60
Query: 180 ISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
I GL V+IP+ +AYN ++ +++GFA + +
Sbjct: 61 IMTAFGLVVAIPAVLAYNILGRLVRQLVEELDGFARDLHVFV 102
>gi|294507601|ref|YP_003571659.1| biopolymer transport protein ExbB [Salinibacter ruber M8]
gi|294343929|emb|CBH24707.1| biopolymer transport protein ExbB [Salinibacter ruber M8]
Length = 245
Score = 108 bits (270), Expect = 7e-22, Method: Composition-based stats.
Identities = 35/188 (18%), Positives = 70/188 (37%), Gaps = 17/188 (9%)
Query: 43 IQKSVNFITLRRQFREFEQL---FWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSC 99
+++ + F ++E + + N+ + I + +
Sbjct: 60 VERLITIRQAASDPEAITDRVREFVRSGNVEAAIQYCEE-KNVPITRILQQGLERLGRPI 118
Query: 100 DKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQ 159
+ I + A E ++ ++ + L S++ ++G G V+GM+ FQ
Sbjct: 119 SE-----------IQDAVQAAGKHETFDLEKRTNLLASIAGIAPMLGFFGTVVGMIRAFQ 167
Query: 160 SIAGYYSN--NVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEF 217
I N V GI E+LI+ GL V I + +YN + ++ + ME A +F
Sbjct: 168 QIQNLQGNVNPSVLAGGIWEALITTAAGLLVGILALFSYNYLMGRIRRLSNDMERSATDF 227
Query: 218 SAILSRQT 225
+L
Sbjct: 228 IDLLQEPV 235
>gi|82703685|ref|YP_413251.1| MotA/TolQ/ExbB proton channel [Nitrosospira multiformis ATCC 25196]
gi|82411750|gb|ABB75859.1| outer membrane transport energization protein ExbB [Nitrosospira
multiformis ATCC 25196]
Length = 551
Score = 108 bits (270), Expect = 7e-22, Method: Composition-based stats.
Identities = 48/225 (21%), Positives = 85/225 (37%), Gaps = 18/225 (8%)
Query: 18 MQMGLAVK------CIITLLF-IFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS-- 68
MG+ +K + L + +++ V+ K+V + + F F +
Sbjct: 324 SHMGIILKSLTVDGWVAIGLLTVMLLIAIWVMYSKAVYINRVDKSNNRFMDKFRELSTDL 383
Query: 69 --LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIG------IQDRIDRMMDVA 120
++ K+ + L I+ E + D I +D
Sbjct: 384 AMIDKAQGLGKDFEHSSLYRIYHIGAVELAHRFQDTDAAHTDKSLTPQSLDAIRASLDAG 443
Query: 121 IARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESL 179
+ E++ + + L S G +G+LG V+G+M F +IA NV PGI +L
Sbjct: 444 LVEEIQRMNRFMVLLTIAISGGPFIGLLGTVMGVMITFAAIAAAGDVNVNAIAPGIAAAL 503
Query: 180 ISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+ + G+ V+IPS YN K +M F +EF L+
Sbjct: 504 AATVAGMGVAIPSLFGYNYLASRIKAIVSRMHIFVDEFITKLAEN 548
>gi|212690749|ref|ZP_03298877.1| hypothetical protein BACDOR_00236 [Bacteroides dorei DSM 17855]
gi|237708134|ref|ZP_04538615.1| MotA/TolQ/ExbB proton channel [Bacteroides sp. 9_1_42FAA]
gi|237723670|ref|ZP_04554151.1| MotA/TolQ/ExbB proton channel [Bacteroides sp. D4]
gi|265756790|ref|ZP_06090778.1| MotA/TolQ/ExbB proton channel [Bacteroides sp. 3_1_33FAA]
gi|212666626|gb|EEB27198.1| hypothetical protein BACDOR_00236 [Bacteroides dorei DSM 17855]
gi|229437881|gb|EEO47958.1| MotA/TolQ/ExbB proton channel [Bacteroides dorei 5_1_36/D4]
gi|229457687|gb|EEO63408.1| MotA/TolQ/ExbB proton channel [Bacteroides sp. 9_1_42FAA]
gi|263233576|gb|EEZ19196.1| MotA/TolQ/ExbB proton channel [Bacteroides sp. 3_1_33FAA]
Length = 271
Score = 108 bits (270), Expect = 8e-22, Method: Composition-based stats.
Identities = 49/220 (22%), Positives = 95/220 (43%), Gaps = 22/220 (10%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVI---IQKSVNFITL--RRQF 56
NN+ L + + G+ V I TLL +VI I++ + +
Sbjct: 49 NNHPLPG---NFLGTIYKGGIVVPIIQTLLL-------TVIALSIERYFAIRSAFGKGSL 98
Query: 57 REFEQLFWSGQSLETV----CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDR 112
+F S L T + L + +A + S + ++ + + S
Sbjct: 99 VKFVANIKSA--LATGDMKKAQELCDKQGGSVANVVTSTLKKYAEVENDETLSKDQKVLA 156
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI-AGYYSNNVVS 171
I + ++ A A EL + + L +G++++ G L+G+LG V+GM+ F ++ AG ++++
Sbjct: 157 IQKELEEATALELPMMEQNLPIIGTITTLGTLMGLLGTVIGMIRSFAALSAGGGTDSMAL 216
Query: 172 IPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
GI E+LI+ G+ + IAYN + K ++
Sbjct: 217 SQGISEALINTAFGILTGALAVIAYNYYTNKIDKLTYSLD 256
>gi|294794351|ref|ZP_06759487.1| MotA/TolQ/ExbB proton channel family protein [Veillonella sp.
3_1_44]
gi|294454681|gb|EFG23054.1| MotA/TolQ/ExbB proton channel family protein [Veillonella sp.
3_1_44]
Length = 203
Score = 107 bits (269), Expect = 8e-22, Method: Composition-based stats.
Identities = 39/218 (17%), Positives = 91/218 (41%), Gaps = 20/218 (9%)
Query: 14 FALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ-SLETV 72
+ LF+ G ++ L + I++ ++ I++ + L+R+ + + +++
Sbjct: 5 WELFLHGGF----VMWPLLVALIITVAIAIERIAYYRQLKREMFALNDALEESEINWQSL 60
Query: 73 CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKL 132
SL++ + ++ + G + + M+ +A + L
Sbjct: 61 LISLESKYTANIS---------YNLPRVLGQCQDRNV---LQSKMEDMVAHVYTHASRGL 108
Query: 133 SFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPS 192
+L ++ + L+G+LG V GM+G FQ + G+ E+L++ GLCV+I +
Sbjct: 109 DWLSTIVTIAPLLGLLGTVTGMIGAFQVFGADGAVPTAITGGVGEALVATASGLCVAIVA 168
Query: 193 SIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
+ F + ++E + FS +L G+ +
Sbjct: 169 LCFHAGFTHHVRMTISRLE---DSFSRVLDSYDRGHAA 203
>gi|148653313|ref|YP_001280406.1| MotA/TolQ/ExbB proton channel [Psychrobacter sp. PRwf-1]
gi|148572397|gb|ABQ94456.1| MotA/TolQ/ExbB proton channel [Psychrobacter sp. PRwf-1]
Length = 219
Score = 107 bits (269), Expect = 9e-22, Method: Composition-based stats.
Identities = 37/196 (18%), Positives = 69/196 (35%), Gaps = 31/196 (15%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+ A + + K + L SI SW I + L+ L
Sbjct: 1 MDFAAYWQYTDIVTKFLFFSLLGLSIASWIAGILRLYQSSQLKSTV---------ATDLT 51
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
+ +S + A + +++++ I R +
Sbjct: 52 QAVSA---------------------ESKNLSALGSSERKTVVEQVLMKEIGRYRYSGEK 90
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVS 189
L+ LG+ ++ +G+ G V G+ SI + + G + E+LI LGL V+
Sbjct: 91 GLAILGTTAAIAPFIGLFGTVWGIFHALHSIGESGQAGLSQVAGPVGEALIMTGLGLAVA 150
Query: 190 IPSSIAYNKFIEDSKK 205
IP+ I YN I +++
Sbjct: 151 IPAVIFYNIAIRINRR 166
>gi|332974511|gb|EGK11432.1| TonB family auxiliary protein ExbB [Psychrobacter sp. 1501(2011)]
Length = 217
Score = 107 bits (269), Expect = 9e-22, Method: Composition-based stats.
Identities = 40/210 (19%), Positives = 74/210 (35%), Gaps = 31/210 (14%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+ A + + K + L SI SW + +
Sbjct: 1 MDFAAYWQYTDVVTKFLFFSLLALSIASWITGLLRLYQ---------------------- 38
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
LK+ GL + +S + + + +++++ I R E +
Sbjct: 39 --SSQLKDKVASGLEQAVGA------ESKNIASLQSAERKTVVEQVLLKEIGRYRFESEK 90
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVS 189
L+ LG+ ++ +G+ G V G+ SI + + G + E+LI LGL V+
Sbjct: 91 GLAILGTTAAIAPFIGLFGTVWGIFHALHSIGESGQAGLSQVAGPVGEALIMTGLGLAVA 150
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
IP+ I YN + ++K A A
Sbjct: 151 IPAVIFYNIAVRINRKTLFIANDTAYGLLA 180
>gi|296121013|ref|YP_003628791.1| MotA/TolQ/ExbB proton channel [Planctomyces limnophilus DSM 3776]
gi|296013353|gb|ADG66592.1| MotA/TolQ/ExbB proton channel [Planctomyces limnophilus DSM 3776]
Length = 339
Score = 107 bits (268), Expect = 1e-21, Method: Composition-based stats.
Identities = 42/200 (21%), Positives = 78/200 (39%), Gaps = 17/200 (8%)
Query: 31 LFIFSILSWSVIIQKSVNFITLRR----QFREFEQLFWSGQSLETVCKSLKNHHNIGLAA 86
L + S+L V I++ V R R F G L + ++
Sbjct: 126 LGLASVLVLWVTIERLVVLRRSRVIPQPFVRRFFDHMREGHLDPKTSLQLCEENGSPISI 185
Query: 87 IFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVG 146
+F + +W K I D +R + ++ + + L ++ L+G
Sbjct: 186 VFAHGLRKWGK---PSVEVEQAIIDGGER--------QTSQLRKHIRVLNGAATVAPLIG 234
Query: 147 ILGAVLGMMGFFQSIAGYYSN--NVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSK 204
+LG V GM+ F +IA + GI +L++ GL ++IP+ I Y F
Sbjct: 235 LLGTVAGMIESFNTIAAKQAMGRTEDLAAGIGLALLTTAAGLLIAIPALIMYMYFAGRVD 294
Query: 205 KFAMQMEGFANEFSAILSRQ 224
++M+G A + ++S +
Sbjct: 295 SLIIEMDGLAQDLVDLISAE 314
>gi|297620445|ref|YP_003708582.1| putative biopolymer transport protein ExbB [Waddlia chondrophila
WSU 86-1044]
gi|297375746|gb|ADI37576.1| putative biopolymer transport protein ExbB [Waddlia chondrophila
WSU 86-1044]
Length = 214
Score = 107 bits (268), Expect = 1e-21, Method: Composition-based stats.
Identities = 44/207 (21%), Positives = 94/207 (45%), Gaps = 19/207 (9%)
Query: 27 IITLLFIF-SILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLK--NHHNIG 83
II +L F SI+S+++ I++ ++ F + V +++
Sbjct: 19 IILILIGFCSIVSFTIFIERLMHLKRSEIDTNSFILQLRKHINDGDVIEAIHTCEKTKGT 78
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
++ I + +++ +S ++ I+ M++A E+ ++ + L ++
Sbjct: 79 ISNIVKAGLAKHNRS-----------KEEIENSMEIAGMIEIAQLEKNAKILSIIAHIAP 127
Query: 144 LVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIE----SLISILLGLCVSIPSSIAYNKF 199
LVG+LG VLG + F + + +S I E +L++ GL V+IPS +AYN
Sbjct: 128 LVGLLGTVLGFIQAFAEMRMSGLVD-ISANRIGEAMEYALVTTAAGLVVAIPSVLAYNYV 186
Query: 200 IEDSKKFAMQMEGFANEFSAILSRQTE 226
+ + F ++++ ++E +L Q E
Sbjct: 187 VSRIEGFILEIQTSSSEIVDLLVYQKE 213
>gi|325286942|ref|YP_004262732.1| MotA/TolQ/ExbB proton channel [Cellulophaga lytica DSM 7489]
gi|324322396|gb|ADY29861.1| MotA/TolQ/ExbB proton channel [Cellulophaga lytica DSM 7489]
Length = 230
Score = 107 bits (268), Expect = 1e-21, Method: Composition-based stats.
Identities = 36/193 (18%), Positives = 76/193 (39%), Gaps = 15/193 (7%)
Query: 37 LSWSVIIQKSVNFITLRRQFREFEQLFWSGQS--LETVCKSLKNHHNIGLAAIFMSAMSE 94
++ + ++ + + F + + L + +A
Sbjct: 49 VALYIYFERIFAIKAASKIDKNFMNQIKDHVTNGKLEAARMLCAQTDSPVA--------- 99
Query: 95 WKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGM 154
+ +KG D I+ ++ A E+ ++ + +S L +++ A ++G LG V+GM
Sbjct: 100 --RLTEKGVSRIGKPLDDINTAIENAGTLEVYKLEKNVSVLATVAGAAPMIGFLGTVIGM 157
Query: 155 MGFFQSIA--GYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEG 212
+ F +A G + GI ++ + + GL V I + I YN + + K ME
Sbjct: 158 ILAFHEMASAGGQAEMGSLASGIYTAMTTTVAGLVVGIIAYIGYNHLVNRTGKVVHAMEA 217
Query: 213 FANEFSAILSRQT 225
A +F +L+
Sbjct: 218 NAVDFLDLLNEPL 230
>gi|119356439|ref|YP_911083.1| MotA/TolQ/ExbB proton channel [Chlorobium phaeobacteroides DSM 266]
gi|119353788|gb|ABL64659.1| outer membrane transport energization protein ExbB [Chlorobium
phaeobacteroides DSM 266]
Length = 248
Score = 107 bits (268), Expect = 1e-21, Method: Composition-based stats.
Identities = 41/209 (19%), Positives = 88/209 (42%), Gaps = 11/209 (5%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITL--RRQFREFEQLFWSGQS- 68
S+F + G V ++ L + I + I+++ + + +F Q
Sbjct: 32 SMFHAIWKGGPIV-SVLMALILMVI---AYIVERIIALNKAAGKGNIPQFVQSLKQDIDN 87
Query: 69 --LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
++ H + L+A+ S + +KK +++ ++ A E+
Sbjct: 88 GYVDQAIAKCDEHQSC-LSAVLRSVLDRYKKMGSLNITDRDKRISEMEKAVEEATIMEMP 146
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISILLG 185
+ + L + +++S ++G+LG LGM+ F ++A + + V + GI E+L + LG
Sbjct: 147 LLEKNLVAISTIASISTMIGLLGTTLGMIRAFAAMATSGAPDAVQLSLGISEALFNTALG 206
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFA 214
+ I + YN FI F+ ++ A
Sbjct: 207 IVGGIMGIVTYNVFISKVDHFSYMIDEAA 235
>gi|254525423|ref|ZP_05137475.1| MotA/TolQ/ExbB proton channel [Prochlorococcus marinus str. MIT
9202]
gi|221536847|gb|EEE39300.1| MotA/TolQ/ExbB proton channel [Prochlorococcus marinus str. MIT
9202]
Length = 203
Score = 107 bits (268), Expect = 1e-21, Method: Composition-based stats.
Identities = 47/210 (22%), Positives = 86/210 (40%), Gaps = 15/210 (7%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
+ LF+ GL ++ L FSI+S++ II++ + + + R +L ++
Sbjct: 1 MINLFIAGGL----VMWPLLFFSIISFACIIERFIFWKRVVSLNRN---------NLNSI 47
Query: 73 CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKL 132
+ N N+ + + +KK K + Q + + +++ E +
Sbjct: 48 AEKFSNLENLPQSKNKNDLYNPYKKLLLKVKEFNLNNQKNLSIALAISLQSIQYEFDKFN 107
Query: 133 SFLGSMSSAGLLVGILGAVLGMMGFF--QSIAGYYSNNVVSIPGIIESLISILLGLCVSI 190
+F + + L+G+LG V G++ F I N GI E+LIS GL ++I
Sbjct: 108 NFFSTTIAISPLLGLLGTVFGLINSFSFIDIGNIGVNAEEVTGGISEALISTAAGLIIAI 167
Query: 191 PSSIAYNKFIEDSKKFAMQMEGFANEFSAI 220
+ I N F K M F +F I
Sbjct: 168 FTLIFSNYFKAIRNKQLRIMNEFCGKFETI 197
>gi|260888612|ref|ZP_05899875.1| MotA/TolQ/ExbB proton channel family domain protein [Selenomonas
sputigena ATCC 35185]
gi|330838098|ref|YP_004412678.1| MotA/TolQ/ExbB proton channel [Selenomonas sputigena ATCC 35185]
gi|260861645|gb|EEX76145.1| MotA/TolQ/ExbB proton channel family domain protein [Selenomonas
sputigena ATCC 35185]
gi|329745862|gb|AEB99218.1| MotA/TolQ/ExbB proton channel [Selenomonas sputigena ATCC 35185]
Length = 208
Score = 107 bits (268), Expect = 1e-21, Method: Composition-based stats.
Identities = 44/213 (20%), Positives = 81/213 (38%), Gaps = 20/213 (9%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQL---FWSGQS 68
+ + LF + G ++ +L SI + I++ + R +F F
Sbjct: 3 NTWELFQKGGP----VMYVLLACSIAVAVIAIERFRFYRQAGRGASDFVAKLPTFLKEHD 58
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
L+ + L N A I + D + +D A A +
Sbjct: 59 LKQAAE-LCQTENTAPAYIAEIGVR------------AAAAGDDLTLALDTAYADMAMRL 105
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCV 188
E+L++L + + L+G+LG + GM+ F + + GI E+LI+ GLCV
Sbjct: 106 RERLNYLSMIVTMAPLLGLLGTISGMIESFSIFSVRAGEPLAITGGIGEALIATATGLCV 165
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+I S I + F++ + ++ A L
Sbjct: 166 AIFSLIVHTYFVQKLDEMLATLDKAAAAVRNAL 198
>gi|95930818|ref|ZP_01313550.1| MotA/TolQ/ExbB proton channel [Desulfuromonas acetoxidans DSM 684]
gi|95133166|gb|EAT14833.1| MotA/TolQ/ExbB proton channel [Desulfuromonas acetoxidans DSM 684]
Length = 470
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 41/215 (19%), Positives = 87/215 (40%), Gaps = 18/215 (8%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE- 70
+ + G+ V I+ L I ++S I++++ + +
Sbjct: 268 TFWQRIKGGGVLVWPILLLAVIAVLIS----IERALFLKKVHDNTDRTMNQVNEYAEQDD 323
Query: 71 -TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
C+ L + + + + +S + + ++ ++ AI +EL +
Sbjct: 324 WEACQKLIEGRSTPVYNVVRAGISARHEER-----------EILESILQEAILKELPRLE 372
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCV 188
L L M++ L+G+LG V GM+ F+ I Y + + + GI +L++ +LGL V
Sbjct: 373 RALPLLNIMAAIAPLLGLLGTVTGMISTFEIINIYGTGDPRMMSGGISVALVTTMLGLVV 432
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
+IP + + + ME + + I+SR
Sbjct: 433 AIPIMLLHTFLNRQVEHIIGDMEEKSVALTNIISR 467
>gi|89891836|ref|ZP_01203338.1| putative biopolymer transport protein [Flavobacteria bacterium
BBFL7]
gi|89515991|gb|EAS18656.1| putative biopolymer transport protein [Flavobacteria bacterium
BBFL7]
Length = 231
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 38/195 (19%), Positives = 81/195 (41%), Gaps = 19/195 (9%)
Query: 37 LSWSVIIQKSVNFITLRRQFREF----EQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAM 92
++ + ++ + +F + +G+ K L N +A
Sbjct: 50 VALYIYFERLFKIKGSSKIDDKFMLQIKDHVSNGRI--DAAKILCAQENSPVA------- 100
Query: 93 SEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVL 152
+ +KG + I+ ++ A E+ ++ + +S L +++ A ++G LG V+
Sbjct: 101 ----RLTEKGISRIGSPLEDINGAIENAGKLEVYKLEKNVSILATIAGAAPMIGFLGTVI 156
Query: 153 GMMGFFQSIAGYYSNNVV--SIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQM 210
GM+ F+++A + GI ++ + + GL V I + I YN + + K QM
Sbjct: 157 GMVIAFRTLAESEGAPEMGTLAEGIYTAMTTTVAGLIVGIIAYIGYNHLVVKTDKVVHQM 216
Query: 211 EGFANEFSAILSRQT 225
E A +F +L+
Sbjct: 217 ESNAVDFLDLLNEPA 231
>gi|293606745|ref|ZP_06689098.1| transporter ExbB2 [Achromobacter piechaudii ATCC 43553]
gi|292814895|gb|EFF74023.1| transporter ExbB2 [Achromobacter piechaudii ATCC 43553]
Length = 237
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 52/202 (25%), Positives = 92/202 (45%), Gaps = 8/202 (3%)
Query: 30 LLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS-GQSLETVCKS---LKNHHNIGLA 85
+L + + SW ++ +KS N + F F + GQ LE + + N L
Sbjct: 1 MLVLMMVQSWIIMFRKSRNVARVSAANEAFRDSFATVGQRLELLADDTALAQRLANASLW 60
Query: 86 AIFMSAMSEWKKSCDKGARS---PIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAG 142
++ A++E + +GA + + I MD +E + KL L + + G
Sbjct: 61 RLYRVAINEIRTRRAQGADTTSISAATIEAIRASMDAVRTKENLALGSKLGSLSNAIAGG 120
Query: 143 LLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIE 201
+G+LG VLG+M F A N+ PG+ +L++ +GL V+IP+ YN+ +
Sbjct: 121 PYIGLLGTVLGIMVVFLGTAMAGDVNINAIAPGMAAALLATAMGLFVAIPALFGYNRLVS 180
Query: 202 DSKKFAMQMEGFANEFSAILSR 223
+K+ + M F +EF L+
Sbjct: 181 RNKEVSADMRVFVDEFITRLAE 202
>gi|255693826|ref|ZP_05417501.1| MotA/TolQ/ExbB proton channel family protein [Bacteroides
finegoldii DSM 17565]
gi|260620358|gb|EEX43229.1| MotA/TolQ/ExbB proton channel family protein [Bacteroides
finegoldii DSM 17565]
Length = 267
Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats.
Identities = 42/217 (19%), Positives = 92/217 (42%), Gaps = 16/217 (7%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITL--RRQFREF 59
NN+ L + + G+ V I TLL LS I++ + + +F
Sbjct: 46 NNHPLPG---NFLGTIYKGGIIVPVIQTLLLTVLALS----IERYFALRSAFGKGSLAKF 98
Query: 60 EQLFWSGQSLETV----CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDR 115
+ L + + ++ +A + S + ++ + A S I +
Sbjct: 99 VANIKAA--LAEGDIKKAQEICDNQRGSVANVVTSTLRKYDEMEKNTALSKEQKLLAIQK 156
Query: 116 MMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-G 174
++ A A E+ + + L + ++++ G L+G+LG V+GM+ F +++ + +++ G
Sbjct: 157 ELEEATALEMPMMQQNLPIIATITTLGTLMGLLGTVIGMIRSFAALSAGGGADSMALSQG 216
Query: 175 IIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
I E+LI+ G+ + I+YN + K ++
Sbjct: 217 ISEALINTAFGILTGALAVISYNYYTNKIDKLTYGLD 253
>gi|313674448|ref|YP_004052444.1| outer membrane transport energization protein exbb [Marivirga
tractuosa DSM 4126]
gi|312941146|gb|ADR20336.1| outer membrane transport energization protein ExbB [Marivirga
tractuosa DSM 4126]
Length = 225
Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats.
Identities = 35/130 (26%), Positives = 61/130 (46%), Gaps = 2/130 (1%)
Query: 96 KKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMM 155
K +KG I+ ++ E+ + + LS L ++S A ++G LG V GM+
Sbjct: 94 AKMLEKGVSRIGSPLKNIEVSIENVGKVEIYRLEKNLSLLATISGAAPMIGFLGTVTGMI 153
Query: 156 GFFQSIAGYYSN--NVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGF 213
F +IA + + GI E++I+ +GL V I + + YN + +K +ME
Sbjct: 154 QAFIAIAQEEGSVSPKLLSEGIYEAMITTAVGLSVGIIAYLGYNYLVTQVQKVIHKMEYT 213
Query: 214 ANEFSAILSR 223
+ EF +L
Sbjct: 214 SVEFIDLLQE 223
>gi|71066218|ref|YP_264945.1| MotA/TolQ/ExbB proton channel [Psychrobacter arcticus 273-4]
gi|71039203|gb|AAZ19511.1| MotA/TolQ/ExbB proton channel [Psychrobacter arcticus 273-4]
Length = 193
Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats.
Identities = 35/210 (16%), Positives = 71/210 (33%), Gaps = 31/210 (14%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+ + + + LL SI+SW I + + L +
Sbjct: 1 MDFTNYWQYSDAVTRTLFFLLLALSIVSWVTGIIRVLQSRKL----------------VT 44
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
TV L + + ++ + + ++ IG R
Sbjct: 45 TVADDLSQQLQAKRSDLSVADAATRRLITEQTLLKHIG--------------RYRFSSER 90
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVS 189
L LG+ ++ +G+ G V G+ +I + + G + E+LI LG+ V+
Sbjct: 91 GLPILGTTAAIAPFIGLFGTVWGIFHALHNIGMSGQAGLGQVAGPVGEALIMTGLGIAVA 150
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
IP+ + YN + ++ A++ A
Sbjct: 151 IPAVVFYNLAVRINRSVMYHANDRAHDLLA 180
>gi|37520710|ref|NP_924087.1| tolQ-type transport protein [Gloeobacter violaceus PCC 7421]
gi|35211705|dbj|BAC89082.1| gll1141 [Gloeobacter violaceus PCC 7421]
Length = 220
Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats.
Identities = 38/192 (19%), Positives = 81/192 (42%), Gaps = 11/192 (5%)
Query: 22 LAV--KCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNH 79
V I L + S+L+ +V+ ++ + + F + + + L+
Sbjct: 10 FVVNDWWIAVPLLLCSVLTIAVVTERWLYINRNKTDVDRF---------IVRLQRELERA 60
Query: 80 HNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMS 139
+ G + + + G R + + ++ D+ I + + + L+ LG++
Sbjct: 61 NLSGARNLCEQVGGVIGEVAEDGVRLLSVPRVKFEQAFDITINLGMRKFEKHLNVLGTIG 120
Query: 140 SAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKF 199
+ +G+LG V+G++ FQ+ AG + + I +LI+ GL V+I S +AYN F
Sbjct: 121 AVAPFIGLLGTVVGILRSFQTFAGEGATSNKLAAEIGFALIATAAGLIVAIASVVAYNIF 180
Query: 200 IEDSKKFAMQME 211
+F +
Sbjct: 181 QNIVAQFEDDFQ 192
>gi|327403103|ref|YP_004343941.1| outer membrane transport energization protein ExbB [Fluviicola
taffensis DSM 16823]
gi|327318611|gb|AEA43103.1| outer membrane transport energization protein ExbB [Fluviicola
taffensis DSM 16823]
Length = 266
Score = 106 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 44/214 (20%), Positives = 91/214 (42%), Gaps = 12/214 (5%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQ--FREFEQLFWS 65
+D + + G+ V ++ + I I S I++ ++ + + F + S
Sbjct: 49 PIDGNTLGTVYKGGIIVPFLMAVNLIVVIFS----IERFISISKTKGRGNINNFVENIKS 104
Query: 66 ---GQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIA 122
LE + LA + + + +++ + + + ++ AI+
Sbjct: 105 LMDANDLEGAIEECDKQKGS-LANVIRAGLEKYESVKNDSTLDKEQKSEVLKAEIEEAIS 163
Query: 123 RELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISI 182
EL +++ L + + S G L+G++G VLGM+ FQ++ + GI E+LI+
Sbjct: 164 LELPMMSKNLVVISTCVSVGTLIGLIGTVLGMIKSFQAMGEGTPDTTKLSVGISEALINT 223
Query: 183 LLGLCVSIPSSIAYNKFIEDSKKFAMQME--GFA 214
LG+ S +++ YN F + M+ GFA
Sbjct: 224 FLGIFASTLATVMYNFFNTKIDQMTHAMDEAGFA 257
>gi|90407105|ref|ZP_01215294.1| MotA/TolQ/ExbB family proton channel protein [Psychromonas sp.
CNPT3]
gi|90311827|gb|EAS39923.1| MotA/TolQ/ExbB family proton channel protein [Psychromonas sp.
CNPT3]
Length = 237
Score = 106 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 41/214 (19%), Positives = 87/214 (40%), Gaps = 23/214 (10%)
Query: 16 LFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFRE--FEQLFWSGQSLETVC 73
L+ Q G ++ LL I S +S + I++ ++ + + F S +
Sbjct: 17 LWFQQGGV---VMWLLLIASFISTVITIERLFTWLKYTLASDDVNVQNCF-SALEQQDTH 72
Query: 74 KSLK--NHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEK 131
K+L+ N + + + M +++ +
Sbjct: 73 KALQFCQRQNTPRLKMLIEGIQALPFIGTDK--------------MSAYADAKIDNMARG 118
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYY-SNNVVSIPGIIESLISILLGLCVSI 190
S L ++ + ++GILG VLG++ F ++ + + GI ++LIS +GLCV++
Sbjct: 119 QSVLDTIITMAPMLGILGTVLGIIDSFHILSLQGVDDPTAVVGGIAQALISTAMGLCVAL 178
Query: 191 PSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+ + YN F +K +++E EF+ + +
Sbjct: 179 LALLPYNLFRSFLQKLTLRLECVGTEFNHLCQQN 212
>gi|189218266|ref|YP_001938908.1| MotA/TolQ/ExbB proton channel family protein [Methylacidiphilum
infernorum V4]
gi|189185124|gb|ACD82309.1| MotA/TolQ/ExbB proton channel family protein [Methylacidiphilum
infernorum V4]
Length = 278
Score = 106 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 44/218 (20%), Positives = 82/218 (37%), Gaps = 22/218 (10%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS---GQ 67
+S+F + + GL I+ + SIL+ +V ++ V + E +
Sbjct: 48 MSLFDIVHKGGL----IMWPILFCSILALAVFFERLVTYRKSELAVEETLPGIKNLIFKG 103
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + + H I + + + + A E+
Sbjct: 104 NFDEALLRSSSFHGPVGRVIRQILLFHYLPLSE------------LREAAQNAAQLEIPR 151
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLG 185
+ L L +++S L+G+LG V GM+ F ++ A + GI +L+S G
Sbjct: 152 LEAHLPILSTIASISPLLGLLGTVNGMIEAFLAMNRASGAVSVTDLASGIWMALVSTAAG 211
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEF-SAILS 222
+ V+IP+ IAYN I +E + E AI+
Sbjct: 212 ISVAIPTQIAYNFLITRLSAILGDIERVSTELIHAIIE 249
>gi|198284693|ref|YP_002221014.1| MotA/TolQ/ExbB proton channel [Acidithiobacillus ferrooxidans ATCC
53993]
gi|218665964|ref|YP_002427370.1| MotA/TolQ/ExbB proton channel family protein [Acidithiobacillus
ferrooxidans ATCC 23270]
gi|198249214|gb|ACH84807.1| MotA/TolQ/ExbB proton channel [Acidithiobacillus ferrooxidans ATCC
53993]
gi|218518177|gb|ACK78763.1| MotA/TolQ/ExbB proton channel family protein [Acidithiobacillus
ferrooxidans ATCC 23270]
Length = 215
Score = 106 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 35/198 (17%), Positives = 73/198 (36%), Gaps = 6/198 (3%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL--ETVCKSLKNHHNIG 83
++ +L + ++ +VI ++ + R+ + L E + + ++
Sbjct: 15 GVLYVLALLFLIELAVIFDRAWFMRSALRKGKTIIHKLSEVGKLTSEQLEELMQEAKGQP 74
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
I +A G+ + D +D AI + ++L L + +
Sbjct: 75 EEQIITAAYRHMDLVHHYGS----ARGEAFDNRLDEAIFLTTPFLDKRLWILDTTVTLAP 130
Query: 144 LVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDS 203
L+G+ G +LGM F +A G+ ++LI+ GL +++ I +N F
Sbjct: 131 LLGLFGTILGMFHAFSILATPGHAPTQVTGGVADALIATASGLFIAMVGLITFNAFNNAI 190
Query: 204 KKFAMQMEGFANEFSAIL 221
K Q+E L
Sbjct: 191 DKTIQQLESIKLLLINRL 208
>gi|91218299|ref|ZP_01255245.1| putative biopolymer transport protein [Psychroflexus torquis ATCC
700755]
gi|91183574|gb|EAS69971.1| putative biopolymer transport protein [Psychroflexus torquis ATCC
700755]
Length = 229
Score = 106 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 37/190 (19%), Positives = 76/190 (40%), Gaps = 15/190 (7%)
Query: 40 SVIIQKSVNFITLRRQFREFEQLFWSGQSLETV--CKSLKNHHNIGLAAIFMSAMSEWKK 97
+ ++ + + F + + K N +A +
Sbjct: 51 YIYFERIFAINAASKTDKNFMNQIKDSVTSGNIESAKIRCAQENSPVA-----------R 99
Query: 98 SCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGF 157
+KG + I+ ++ A E+ ++ + +S L +++ A ++G LG V+GM+
Sbjct: 100 LTEKGISRIGSPLEDINTAIENAGRLEVYKLEKNVSVLATIAGAAPMIGFLGTVIGMVLA 159
Query: 158 FQSIAGY--YSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFAN 215
F +A + GI ++ + + GL V I + IAYN + + K QME A
Sbjct: 160 FHELATSSGQAQMGSLAEGIYTAMTTTVAGLIVGIIAYIAYNHVVVRTDKVIHQMEATAV 219
Query: 216 EFSAILSRQT 225
+F +L+ +
Sbjct: 220 DFLDLLNEPS 229
>gi|262195254|ref|YP_003266463.1| MotA/TolQ/ExbB proton channel [Haliangium ochraceum DSM 14365]
gi|262078601|gb|ACY14570.1| MotA/TolQ/ExbB proton channel [Haliangium ochraceum DSM 14365]
Length = 247
Score = 106 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 48/232 (20%), Positives = 94/232 (40%), Gaps = 28/232 (12%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLET 71
+I +LF+Q G ++ LLF S S +V I++ V F + + +
Sbjct: 6 TIKSLFVQSG--AGWVLWLLFALSAGSVAVFIERLVYFRS-------------KSEDVRA 50
Query: 72 VCKSLKNHHNIGLAAIFMSAMSEWK----KSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ L H G + A+ + G R + D+ M AIA E +
Sbjct: 51 LAAELDAHLASGAYQAALDALRPLRSVGAAVARAGLRLAPRGSEAADKGMQSAIAVERKG 110
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN---------VVSIPGIIES 178
+ +L++LG++ + +G+ G V+G++ F+ + + I E+
Sbjct: 111 LDARLTYLGTLGNNAPFIGLFGTVIGVILAFEELGQVTGATGAAASQVASAAVMSAIAEA 170
Query: 179 LISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
L++ +G+ V++P+ AYN F E +N A L ++ ++
Sbjct: 171 LVATAVGIGVALPAVAAYNFFQRRISVLLDDAETLSNLVLAYLGARSTAALA 222
>gi|302391557|ref|YP_003827377.1| MotA/TolQ/ExbB proton channel [Acetohalobium arabaticum DSM 5501]
gi|302203634|gb|ADL12312.1| MotA/TolQ/ExbB proton channel [Acetohalobium arabaticum DSM 5501]
Length = 205
Score = 106 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 36/198 (18%), Positives = 72/198 (36%), Gaps = 9/198 (4%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLA 85
II L + SI+ ++ +++ F + ++ S + + + ++
Sbjct: 10 VIIYPLLLCSIIVVTLALERLYQFSRISKEL--------SNNLMNQIKDKISSNKVDKAV 61
Query: 86 AIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLV 145
+ K +G + I+ M E ++ + L L + +
Sbjct: 62 ELCEEVKGPIGKVLKQGILHLDKEPEEIEEQMAEVELEEFPKLEKHLGLLNFIGKISPSL 121
Query: 146 GILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKK 205
G+LG V GM+ F ++ GI E+L + GL +SIP+ AY F ++
Sbjct: 122 GLLGTVTGMIKTFHVLSMSGK-PEQLAQGISEALTTTATGLVISIPALGAYYYFTNKLQQ 180
Query: 206 FAMQMEGFANEFSAILSR 223
A+ E E +
Sbjct: 181 IALHTEKREKELINYIKE 198
>gi|319763307|ref|YP_004127244.1| mota/tolq/exbb proton channel [Alicycliphilus denitrificans BC]
gi|330825502|ref|YP_004388805.1| MotA/TolQ/ExbB proton channel [Alicycliphilus denitrificans K601]
gi|317117868|gb|ADV00357.1| MotA/TolQ/ExbB proton channel [Alicycliphilus denitrificans BC]
gi|329310874|gb|AEB85289.1| MotA/TolQ/ExbB proton channel [Alicycliphilus denitrificans K601]
Length = 212
Score = 106 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 45/222 (20%), Positives = 87/222 (39%), Gaps = 24/222 (10%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLR----RQFREFEQLFWSGQS 68
+ ++ G I L SIL+ +++ ++ + T R + E +
Sbjct: 1 MLSIIQAAGWP----IWPLIACSILALALVFERFMALKTARVAPPKLLDEAISVSSRAVP 56
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
V L+ N L + S + +P + + M+ A + +
Sbjct: 57 APDVVAQLEQ--NSALGEVLASGLRALN-------GNPQSSEADLRAAMEGAGRKVAHRL 107
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQS-------IAGYYSNNVVSIPGIIESLIS 181
+ L+ L +++SA L+G+LG V+GM+ F S A N GI +L +
Sbjct: 108 EKYLTALATIASAAPLLGLLGTVIGMIEIFGSQAGTGAVGATGGGNPAQLAHGISIALYN 167
Query: 182 ILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
GL ++IP+ I + F + + +E + +F +SR
Sbjct: 168 TAFGLIIAIPTLIFWRYFRSRVDAYLLTLELASEQFVRHISR 209
>gi|269148516|gb|ACZ28653.1| MotA/TolQ/ExbB proton channel [uncultured organism]
Length = 301
Score = 106 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 42/187 (22%), Positives = 81/187 (43%), Gaps = 16/187 (8%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
++I +LF Q G ++ +L + SIL+ ++I+ K F + EF + S +
Sbjct: 1 MNIASLFQQGGP----VMVVLLVLSILAVAIILAKLFQFFRSGLRRSEFIEPVISALNDR 56
Query: 71 TVCKSLK--NHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
K+L+ +A + SA+ P + + + + ++
Sbjct: 57 QNNKALELLQQQRSPVARVMESAVR--------CGVDPGMSAQDTEAEVSRVGSARIRDL 108
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGL 186
L L +++ L+G+LG V GM+ F + AG + + GI E+L++ GL
Sbjct: 109 ESWLRGLSAIAHLSPLLGLLGTVTGMITAFMRLEEAGNRVDPSILSGGIWEALLTTAFGL 168
Query: 187 CVSIPSS 193
V+IP+
Sbjct: 169 TVAIPAM 175
>gi|296328306|ref|ZP_06870835.1| biopolymer transport ExbB protein [Fusobacterium nucleatum subsp.
nucleatum ATCC 23726]
gi|296154610|gb|EFG95398.1| biopolymer transport ExbB protein [Fusobacterium nucleatum subsp.
nucleatum ATCC 23726]
Length = 203
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 44/200 (22%), Positives = 79/200 (39%), Gaps = 19/200 (9%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQF-----REFEQLFWSGQSLETVCKSLKNHHNI 82
+ + + I+ ++++ F+ + + QL G+ E + N +
Sbjct: 11 MYFILLMGIIGLYAVLERFSYFLIKEKNNFSKLPSDVRQLINEGKIKEAIVALNSNKSST 70
Query: 83 G--LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSS 140
L I + E K++ A G + I+R ++ + + L ++
Sbjct: 71 SVVLKEILIYGYKENKETL--SALEEKGKEKAIER---------IKSLERNMWLLSLAAN 119
Query: 141 AGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKF 199
A L+G+LG V GM+ F SIA + + V GI E+L + GL V+IP I YN F
Sbjct: 120 ASPLLGLLGTVTGMIKAFNSIALNGTGDAGVLAKGISEALYTTAGGLIVAIPCMIFYNYF 179
Query: 200 IEDSKKFAMQMEGFANEFSA 219
+ +E E
Sbjct: 180 NKKIDLIVSDIEKTCTELLN 199
>gi|254473807|ref|ZP_05087202.1| MotA/TolQ/ExbB proton channel [Pseudovibrio sp. JE062]
gi|211957193|gb|EEA92398.1| MotA/TolQ/ExbB proton channel [Pseudovibrio sp. JE062]
Length = 244
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 40/191 (20%), Positives = 78/191 (40%), Gaps = 16/191 (8%)
Query: 35 SILSWSVIIQKSVNFITL----RRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMS 90
S+L+ +++ K F R+ + FW + K + ++ +
Sbjct: 35 SVLALTIVFAKLWQFWVAGVGRHRKAEQAV-AFWRVGKRDQAYKIVVTDR-SPVSDVLAH 92
Query: 91 AMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGA 150
AM G P ++++ ++ L ++ L L ++ L+G+ G
Sbjct: 93 AMR--------GLMKPQVPEEKVREDVERVCFTHLGDLRSYLRALDMIAQIAPLLGLFGT 144
Query: 151 VLGMMGFFQSIA--GYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAM 208
VLGM+G FQ++A G + GI +L++ +GL V+IP+S+ + F ++
Sbjct: 145 VLGMIGAFQAMADAGSQVDPSTLAGGIWVALLTTAVGLAVAIPASVMLSLFEGRIEREQG 204
Query: 209 QMEGFANEFSA 219
ME E
Sbjct: 205 AMEKIVTELFT 215
>gi|156310390|ref|XP_001617735.1| hypothetical protein NEMVEDRAFT_v1g225836 [Nematostella vectensis]
gi|156195550|gb|EDO25635.1| predicted protein [Nematostella vectensis]
Length = 154
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 34/149 (22%), Positives = 67/149 (44%), Gaps = 12/149 (8%)
Query: 79 HHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSM 138
+ L I ++ +S + + + + ++ + E+ L+ LG++
Sbjct: 10 RKSSPLGRIIVAGLSNARHGR-----------EIMKESIQETASQVIHEMERFLTALGTI 58
Query: 139 SSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYN 197
++ L+G+LG V+GM+ F I + N V GI E+LI+ GL V+IP+ I +
Sbjct: 59 AAITPLLGLLGTVIGMIKVFTEIMAQGTGNASVLAGGISEALITTAAGLAVAIPTLIFHR 118
Query: 198 KFIEDSKKFAMQMEGFANEFSAILSRQTE 226
F ++ME A + ++ + E
Sbjct: 119 HFQRKIDSLVVEMEQQAVKLVEMVHGERE 147
>gi|312897586|ref|ZP_07757003.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Megasphaera micronuciformis F0359]
gi|310621219|gb|EFQ04762.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Megasphaera micronuciformis F0359]
Length = 204
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 36/211 (17%), Positives = 80/211 (37%), Gaps = 18/211 (8%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
++ LF + G ++ +L + S+ ++ ++ + L + F
Sbjct: 1 MNGLELFEKGG----AVMYILVLCSLGVVTIAAERIAFYRRLNKGTEHFLAWLPLALRNN 56
Query: 71 TVCKSLKN--HHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
V L++ H + +A + + E + D + +D A +
Sbjct: 57 GVQYVLEDCEHDDSAVAYVATQGIKEAMRGGD------------VTLALDTAYNDISGHL 104
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCV 188
L++LG + + L+G+LG + GM+ F + GI E+LI+ GLCV
Sbjct: 105 RAHLNYLGMIVTLSPLLGLLGTISGMISSFNVFSMQAGEPTAITGGIGEALIATATGLCV 164
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
+I + + + + + ++ + A
Sbjct: 165 AIMALVIHTVLAQKLDEILTALDKVTSVILA 195
>gi|149928091|ref|ZP_01916338.1| probable exbB-like biopolymer transport [Limnobacter sp. MED105]
gi|149823177|gb|EDM82414.1| probable exbB-like biopolymer transport [Limnobacter sp. MED105]
Length = 204
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 39/213 (18%), Positives = 72/213 (33%), Gaps = 15/213 (7%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
++++ G I L S+++ +++ ++ + + V
Sbjct: 1 MWSIISAAGWP----IWPLIFGSVVALAIVFERVWALRK---------KDLIPENLVTDV 47
Query: 73 CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKL 132
CK+L + I S S + I+ M + + L
Sbjct: 48 CKTLPQFKDR--QNIARLEAHSALGSLMAAGLSAFYKNEDIESAMQDKSVGIQNTLEKHL 105
Query: 133 SFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPS 192
L ++SA L+G+LG V+GM+ F GI +L + GL V+IP+
Sbjct: 106 DVLSMIASAAPLMGLLGTVIGMIEIFAVQGSGTQTPEAIAAGIAVALYNTAFGLIVAIPA 165
Query: 193 SIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+AY F M F +L +
Sbjct: 166 LVAYRLFRIRINSLLEDMGESLKPFEDLLKQHA 198
>gi|294775204|ref|ZP_06740728.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Bacteroides vulgatus PC510]
gi|294450909|gb|EFG19385.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Bacteroides vulgatus PC510]
Length = 271
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 47/219 (21%), Positives = 95/219 (43%), Gaps = 20/219 (9%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVI---IQKSVNFITL--RRQF 56
NN+ L S + G+ V I TLL +VI +++ + + R
Sbjct: 49 NNHPLPG---SFLGTIYKGGVVVPIIQTLLL-------TVIALSVERYLAIRSAFGRGSL 98
Query: 57 REFEQLFWS---GQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRI 113
+F S ++ + L + +A + S + ++ + S I
Sbjct: 99 VKFVANIKSTLAAGDMKKA-QELCDKQGGSVANVVTSTLRKYADVENDATLSKDQKVLAI 157
Query: 114 DRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI-AGYYSNNVVSI 172
+ ++ A A EL + + L +G++++ G L+G+LG V+GM+ F ++ AG ++++
Sbjct: 158 QKELEEATALELPMMEQNLPVIGTITTLGTLMGLLGTVIGMIRSFAALSAGGGTDSMALS 217
Query: 173 PGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
GI E+LI+ G+ + I+YN + K ++
Sbjct: 218 QGISEALINTAFGILTGALAVISYNYYTNKIDKLTYSLD 256
>gi|312897627|ref|ZP_07757044.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Megasphaera micronuciformis F0359]
gi|310621260|gb|EFQ04803.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Megasphaera micronuciformis F0359]
Length = 207
Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats.
Identities = 35/188 (18%), Positives = 79/188 (42%), Gaps = 15/188 (7%)
Query: 27 IITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFW-SGQSLE-TVCKSLKNHHNIGL 84
++ LFI S+++ ++ I++ + + R++ + F + +S + V + + H +
Sbjct: 17 VMIPLFILSVITIAIAIERGIYYKRNRKKSQSFFSHIEGAAKSGDWKVAEEVCEHSQTAI 76
Query: 85 AAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLL 144
+ I + + ++ + +A E L +L ++ + L
Sbjct: 77 SRIIAAGLQ------------DASTEESMKSAFSEQMALESAAFQRYLDYLSAIVTVAPL 124
Query: 145 VGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSK 204
+G+LG V GM+ F + G + ++ G+ E+L++ GLCV+I + Y F
Sbjct: 125 LGLLGTVTGMITTFSVLDGGMGASAITG-GVGEALVATATGLCVAIIAFAVYTFFTHQLD 183
Query: 205 KFAMQMEG 212
E
Sbjct: 184 TIVSDTER 191
>gi|126640526|ref|YP_001083510.1| putative biopolymer transport protein (ExbB) [Acinetobacter
baumannii ATCC 17978]
Length = 183
Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats.
Identities = 39/186 (20%), Positives = 73/186 (39%), Gaps = 31/186 (16%)
Query: 34 FSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMS 93
SI +W+V I + + L++Q L SLK L+ A++
Sbjct: 1 MSIATWTVFILRLMGTRQLKQQAYA---------QLSQAITSLKA-KLQPLSFEQRKAVA 50
Query: 94 EWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLG 153
E + + I+ E + +S LG+++S VG+ G V G
Sbjct: 51 E--------------------QALLRQISAEKANADKGISVLGTIASIAPFVGLFGTVWG 90
Query: 154 MMGFFQSIAGYYSNNVVSIP-GIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEG 212
+ ++ + + + E+LI LGL V+IP+ +AYN + ++ A ++
Sbjct: 91 IFHALVAVGKSGQAGLAQVATPVGEALIMTGLGLAVAIPAVLAYNICVRANRGLAHDLQD 150
Query: 213 FANEFS 218
A+
Sbjct: 151 QAHSLL 156
>gi|150004174|ref|YP_001298918.1| MotA/TolQ/ExbB proton channel [Bacteroides vulgatus ATCC 8482]
gi|254884810|ref|ZP_05257520.1| MotA/TolQ/ExbB proton channel [Bacteroides sp. 4_3_47FAA]
gi|319644108|ref|ZP_07998652.1| MotA/TolQ/ExbB proton channel [Bacteroides sp. 3_1_40A]
gi|149932598|gb|ABR39296.1| MotA/TolQ/ExbB proton channel [Bacteroides vulgatus ATCC 8482]
gi|254837603|gb|EET17912.1| MotA/TolQ/ExbB proton channel [Bacteroides sp. 4_3_47FAA]
gi|317384330|gb|EFV65300.1| MotA/TolQ/ExbB proton channel [Bacteroides sp. 3_1_40A]
Length = 271
Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats.
Identities = 47/219 (21%), Positives = 95/219 (43%), Gaps = 20/219 (9%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVI---IQKSVNFITL--RRQF 56
NN+ L S + G+ V I TLL +VI +++ + + R
Sbjct: 49 NNHPLPG---SFLGTIYKGGVVVPIIQTLLL-------TVIALSVERYLAIRSAFGRGSL 98
Query: 57 REFEQLFWS---GQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRI 113
+F S ++ + L + +A + S + ++ + S I
Sbjct: 99 VKFVANIKSTLAAGDMKKA-QELCDKQGGSVANVVTSTLRKYADVENDATLSKDQKVLAI 157
Query: 114 DRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI-AGYYSNNVVSI 172
+ ++ A A EL + + L +G++++ G L+G+LG V+GM+ F ++ AG ++++
Sbjct: 158 QKELEEATALELPMMEQNLPVIGTITTLGTLMGLLGTVIGMIRSFAALSAGGGTDSMALS 217
Query: 173 PGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
GI E+LI+ G+ + I+YN + K ++
Sbjct: 218 QGISEALINTAFGILTGALAVISYNYYTNKIDKLTYSLD 256
>gi|254427139|ref|ZP_05040846.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Alcanivorax sp. DG881]
gi|196193308|gb|EDX88267.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Alcanivorax sp. DG881]
Length = 224
Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats.
Identities = 40/193 (20%), Positives = 82/193 (42%), Gaps = 21/193 (10%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLR----RQFREFEQLFWSGQSLETVCKSLKNHHN 81
+ +L + S+++ + +I K + F +R RQ + G+ L N
Sbjct: 17 ATMWVLALLSVIALATLISKILQFARIRPGNSRQADQLLNALRQGKQPGEPAGKL----N 72
Query: 82 IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSA 141
+ + W+ ++ ++ + L+E+ L L +S+
Sbjct: 73 SPIDRVL------WQCWQNRNLDEAAWQEESLRLA-----RSGLDELRGGLRVLEVISAI 121
Query: 142 GLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKF 199
L+G+LG V GM+G FQ++ AG + + GI E+L++ GL V+IP+ A++
Sbjct: 122 APLLGLLGTVFGMIGAFQALETAGSQVDPSILSGGIWEALLTTAAGLTVAIPTLAAFHWA 181
Query: 200 IEDSKKFAMQMEG 212
++ +M+
Sbjct: 182 DRSIEQCREKMQD 194
>gi|308273717|emb|CBX30319.1| hypothetical protein N47_D31280 [uncultured Desulfobacterium sp.]
Length = 147
Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats.
Identities = 29/135 (21%), Positives = 44/135 (32%), Gaps = 14/135 (10%)
Query: 45 KSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGA- 103
K ++ F FW + V K LA IF +E K G
Sbjct: 2 KYKYLRRAFKESEAFTDYFWRCRDFSDVYAKSKELTGSPLARIFRIGYAELAKLSQSGVS 61
Query: 104 -------------RSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGA 150
S D + R + AI E+ +T+ + FL + + +G+ G
Sbjct: 62 ISSMSSESEDVTISSRFAGMDNVKRALRRAINSEITGLTQLVPFLATTGNTSPFIGLFGT 121
Query: 151 VLGMMGFFQSIAGYY 165
V G+M F I
Sbjct: 122 VWGIMNSFHGIGLSG 136
>gi|260886997|ref|ZP_05898260.1| MotA/TolQ/ExbB proton channel family protein [Selenomonas sputigena
ATCC 35185]
gi|330839219|ref|YP_004413799.1| MotA/TolQ/ExbB proton channel [Selenomonas sputigena ATCC 35185]
gi|260863059|gb|EEX77559.1| MotA/TolQ/ExbB proton channel family protein [Selenomonas sputigena
ATCC 35185]
gi|329746983|gb|AEC00340.1| MotA/TolQ/ExbB proton channel [Selenomonas sputigena ATCC 35185]
Length = 212
Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats.
Identities = 44/190 (23%), Positives = 78/190 (41%), Gaps = 16/190 (8%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITL---RRQFREFEQLFWSGQSLETVCKSLKNHHNI 82
I+ +L + SI ++ I++++ F + R REF Q + L H
Sbjct: 16 SIMYVLLLCSIFVVTIGIERAMYFSRMDTGRAFTREFYQCM--ANDDFAGARKLAEDHRG 73
Query: 83 GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAG 142
LA I AM KK R+ M++ L ++ ++L +L + +
Sbjct: 74 ALANILFGAMKLVKKDSS-----------RVSSYMEIQSGIVLSKLRKRLYYLSVIVTMA 122
Query: 143 LLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIED 202
L+G+LG + GM+ F G+ E+LI+ +GLCV+I + + F +
Sbjct: 123 PLLGLLGTISGMISAFSVFNLQSGQATAITGGVGEALIATAMGLCVAIIALSVHAYFTQR 182
Query: 203 SKKFAMQMEG 212
+ ME
Sbjct: 183 IESIVTDMEQ 192
>gi|115376995|ref|ZP_01464213.1| ExbB [Stigmatella aurantiaca DW4/3-1]
gi|310824471|ref|YP_003956829.1| MotA/TolQ/ExbB proton channel family protein [Stigmatella
aurantiaca DW4/3-1]
gi|115365973|gb|EAU64990.1| ExbB [Stigmatella aurantiaca DW4/3-1]
gi|309397543|gb|ADO75002.1| MotA/TolQ/ExbB proton channel family protein [Stigmatella
aurantiaca DW4/3-1]
Length = 233
Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats.
Identities = 43/189 (22%), Positives = 84/189 (44%), Gaps = 16/189 (8%)
Query: 40 SVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSC 99
+++++++V F T R E + + E V +++ + A I E S
Sbjct: 47 ALMLERAVYFSTHRLPDSEALAVKLARGEFEAVRAAIQGRKGMEAAVI-----REGLASS 101
Query: 100 DKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQ 159
+GA D ++ ++ +ARE + LSFLG++ + +G+ G VLG++ F
Sbjct: 102 AQGA-------DTVEEVIASTVARERPQYERYLSFLGTLGNNAPFIGLFGTVLGIIKAFH 154
Query: 160 SIAGY----YSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFAN 215
+ + + GI E+L++ +GL V+IP+ +A+N F K + +
Sbjct: 155 DLGTASVKGAAIQETVMAGISEALVATAVGLAVAIPAVVAFNVFNRQLKTLTSRTNALGH 214
Query: 216 EFSAILSRQ 224
A L +
Sbjct: 215 ALVASLRAE 223
>gi|288817422|ref|YP_003431769.1| biopolymer transport protein ExbB/TolQ-type [Hydrogenobacter
thermophilus TK-6]
gi|288786821|dbj|BAI68568.1| biopolymer transport protein ExbB/TolQ-type [Hydrogenobacter
thermophilus TK-6]
gi|308751029|gb|ADO44512.1| MotA/TolQ/ExbB proton channel [Hydrogenobacter thermophilus TK-6]
Length = 204
Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats.
Identities = 51/218 (23%), Positives = 101/218 (46%), Gaps = 20/218 (9%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFIT---LRRQFREFEQLFWS 65
MD+ IF L + G AV +L S++SW++II++ +N L + ++ + L +
Sbjct: 1 MDM-IFDLLQKGGFAV----YVLLFLSLVSWALIIERLINLRAGSILSKSVKDVKSLL-A 54
Query: 66 GQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
G +E K L + N I + E+K G + + + ++ +
Sbjct: 55 GGDIEGALKLL-SLDNSPAGGILYRMLEEYK----GGKVDKRTLLNDLSF----EVSLLV 105
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVS--IPGIIESLISIL 183
++ + L+ L +++S L+G+ G + G++ F + A + ++ GI E+L+S
Sbjct: 106 PKVEKNLALLSTIASVSPLIGLFGTITGLIKVFSAFAVAQTEQGIALLAAGISEALVSAA 165
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
GL V+IP+ +AY F ++E +E +L
Sbjct: 166 TGLAVAIPALLAYWVFRIIGNSVLDRVEAELSEALRVL 203
>gi|289548648|ref|YP_003473636.1| MotA/TolQ/ExbB proton channel [Thermocrinis albus DSM 14484]
gi|289182265|gb|ADC89509.1| MotA/TolQ/ExbB proton channel [Thermocrinis albus DSM 14484]
Length = 203
Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats.
Identities = 43/216 (19%), Positives = 96/216 (44%), Gaps = 22/216 (10%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFI---TLRRQFREFEQLFWSGQ 67
+ + L + GLAV +L S++SW+++I++ +N L R F++ + L G
Sbjct: 1 MPLLDLLQKGGLAV----YVLLFLSVISWAIVIERLLNLRPSIFLSRSFKDLKTLLAGGD 56
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ L + + + I + + +++ ++ + R + + + +
Sbjct: 57 T--EGAIKLLSLDSSVASRILLRILEDYRTGRIS--------KEDLMRALQEELDLVMPK 106
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYY--SNNVVSIPGIIESLISILLG 185
+ + + L +++S LVG+ G + G++ F + + + GI E+L+S +G
Sbjct: 107 LEKNIPLLSAIASLAPLVGLFGTITGLIKVFSAFSIEQGEQALRLLSSGIGEALVSAAVG 166
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
L V+IP+ Y F + ++E E S +L
Sbjct: 167 LAVAIPALFFYWVFRILAGNILDRLE---EELSQVL 199
>gi|254302059|ref|ZP_04969417.1| possible biopolymer transport protein TolQ [Fusobacterium nucleatum
subsp. polymorphum ATCC 10953]
gi|148322251|gb|EDK87501.1| possible biopolymer transport protein TolQ [Fusobacterium nucleatum
subsp. polymorphum ATCC 10953]
Length = 203
Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats.
Identities = 41/200 (20%), Positives = 75/200 (37%), Gaps = 19/200 (9%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQF-----REFEQLFWSGQSLETVCKSLKNHHNI 82
+ + I+ ++++ F+ R + QL G+ E + N +
Sbjct: 11 MYFILFMGIIGLYAVLERFSYFLIRERNNFSKLPSDVRQLINEGKIKEAIVALNSNKSST 70
Query: 83 GLA--AIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSS 140
L I + E K++ ++ +++ + + L ++
Sbjct: 71 SLVLKEILIYGYKENKETLSA-----------LEEKGKEKAIEQIKSLERNMWLLSLAAN 119
Query: 141 AGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKF 199
A L+G+LG V GM+ F SIA + + V GI E+L + GL V+IP I YN F
Sbjct: 120 ASPLLGLLGTVTGMITAFNSIALNGTGDAGVLAKGISEALYTTAGGLIVAIPCMIFYNYF 179
Query: 200 IEDSKKFAMQMEGFANEFSA 219
+ +E E
Sbjct: 180 NKKIDLIVSDIEKTCTELLN 199
>gi|160882186|ref|ZP_02063189.1| hypothetical protein BACOVA_00131 [Bacteroides ovatus ATCC 8483]
gi|156112441|gb|EDO14186.1| hypothetical protein BACOVA_00131 [Bacteroides ovatus ATCC 8483]
Length = 265
Score = 106 bits (264), Expect = 4e-21, Method: Composition-based stats.
Identities = 41/218 (18%), Positives = 91/218 (41%), Gaps = 14/218 (6%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITL--RRQFRE 58
MNN +++ + G+ V I TLL LS I++ + + +
Sbjct: 41 MNNDP-NNHPLNMLGTIYKGGIIVPIIQTLLLTVLALS----IERYFALRSAFGKGSLSK 95
Query: 59 FEQLFWSGQSLETV----CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRID 114
F L + + + +A + S + ++++ A I
Sbjct: 96 FVANIKDA--LAAGDMKKAQEICDKQRGSVANVVTSTLRKYEEMEKNTALPKEQKLLAIQ 153
Query: 115 RMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP- 173
+ ++ A A E+ + + L + ++++ G L+G+LG V+GM+ F +++ + +++
Sbjct: 154 KELEEATALEMPMMQQNLPIIATITTLGTLMGLLGTVIGMIRSFAALSAGGGADSMALSQ 213
Query: 174 GIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
GI E+LI+ G+ + I+YN + K ++
Sbjct: 214 GISEALINTAFGILTGALAVISYNYYTNKIDKLTYGLD 251
>gi|332662327|ref|YP_004445115.1| MotA/TolQ/ExbB proton channel [Haliscomenobacter hydrossis DSM
1100]
gi|332331141|gb|AEE48242.1| MotA/TolQ/ExbB proton channel [Haliscomenobacter hydrossis DSM
1100]
Length = 278
Score = 106 bits (264), Expect = 4e-21, Method: Composition-based stats.
Identities = 47/214 (21%), Positives = 92/214 (42%), Gaps = 18/214 (8%)
Query: 12 SIFALFMQMGLAVKCII--TLLFIFSILSWSVIIQKSVNFITL--RRQFREFE---QLFW 64
+ F + + G V ++ LL I V I++ + F Q F
Sbjct: 62 NYFGMMYKGGTMVPILMANFLLVIA------VFIERIFTITAASGKGSIPNFVKKVQSFL 115
Query: 65 SGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKK-SCDKGARSPIGIQDRIDRMMDVAIAR 123
SG ++ + +A + + + ++++ + A I + ++ A +
Sbjct: 116 SGDNVASAIAECDKQRGS-VANVVKAGLEKYQEMAVTTEALDREQKVLAITKEIEEATSL 174
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISI 182
E+ + L L ++SS L+G+LG V+GM+ F ++A + + V++ GI E+LI+
Sbjct: 175 EMPMLERNLVILATISSIATLLGLLGTVIGMIKAFSALATAGAPDAVALSSGISEALINT 234
Query: 183 LLGLCVSIPSSIAYNKFIEDSK--KFAMQMEGFA 214
LG+ S + I YN F +A+ GF+
Sbjct: 235 ALGIGTSAFAIIFYNFFTTRIDGMTYAIDEAGFS 268
>gi|153806019|ref|ZP_01958687.1| hypothetical protein BACCAC_00268 [Bacteroides caccae ATCC 43185]
gi|149130696|gb|EDM21902.1| hypothetical protein BACCAC_00268 [Bacteroides caccae ATCC 43185]
Length = 267
Score = 106 bits (264), Expect = 4e-21, Method: Composition-based stats.
Identities = 40/215 (18%), Positives = 92/215 (42%), Gaps = 12/215 (5%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITL--RRQFREF 59
NN+ L + + G+ V I TLL LS I++ + + +F
Sbjct: 46 NNHPLPG---NFLGTIYKGGIIVPVIQTLLLTVLALS----IERYFALRSAFGKGSLAKF 98
Query: 60 EQLFWSGQSLETV--CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMM 117
+ + + + + + +A + S + ++++ + I + +
Sbjct: 99 VANIKAALAAGDIKKAQEICDKQRGSVANVVTSTLRKYEEMEKNTSLPKEQKLLAIQKEL 158
Query: 118 DVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GII 176
+ A A E+ + + L + ++++ G L+G+LG V+GM+ F +++ + +++ GI
Sbjct: 159 EEATALEMPMMQQNLPIIATITTLGTLMGLLGTVIGMIRSFAALSAGGGADSMALSQGIS 218
Query: 177 ESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
E+LI+ G+ + I+YN F K ++
Sbjct: 219 EALINTAFGILTGALAVISYNYFTNKIDKLTYGLD 253
>gi|162452591|ref|YP_001614958.1| biopolymer transport protein, putative [Sorangium cellulosum 'So ce
56']
gi|161163173|emb|CAN94478.1| biopolymer transport protein, putative [Sorangium cellulosum 'So ce
56']
Length = 255
Score = 106 bits (264), Expect = 4e-21, Method: Composition-based stats.
Identities = 37/207 (17%), Positives = 83/207 (40%), Gaps = 21/207 (10%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLA 85
++ L+ S++S ++I++++ F +LR + SL+ ++ + + +
Sbjct: 18 WVMWLMIALSVVSVAIILERAWFFWSLRDDLTVLARDLK--TSLDDSIEAARRRMDASPS 75
Query: 86 AIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLV 145
A + + + + A A + ++ +L++LG++ + +
Sbjct: 76 AEAAVVAAGLAVAHQGPEAAEEAMA--------GAAALQRMKLERRLAYLGTLGNNAPFI 127
Query: 146 GILGAVLGMMGFFQSIAGYYSNNV-----------VSIPGIIESLISILLGLCVSIPSSI 194
G+ G V+G++G F ++ V + I E+L++ +GL V+IP+
Sbjct: 128 GLFGTVIGVVGAFDALGQAAKTPVAQATSQAMAPQAVMSSIAEALVATAVGLAVAIPAVA 187
Query: 195 AYNKFIEDSKKFAMQMEGFANEFSAIL 221
A N F K E A L
Sbjct: 188 ANNFFQRMIKSTLANTEALTRVLLAHL 214
>gi|281356692|ref|ZP_06243183.1| MotA/TolQ/ExbB proton channel [Victivallis vadensis ATCC BAA-548]
gi|281316819|gb|EFB00842.1| MotA/TolQ/ExbB proton channel [Victivallis vadensis ATCC BAA-548]
Length = 215
Score = 105 bits (263), Expect = 4e-21, Method: Composition-based stats.
Identities = 44/204 (21%), Positives = 86/204 (42%), Gaps = 20/204 (9%)
Query: 27 IITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKS--LKNHHNIGL 84
I+ ++ S+++ V ++K F RE + ++ + ++ L ++
Sbjct: 13 IMWVILAGSLIAVFVFLKKVFQFHREEINVRELLRGLFNVLKRDGFVEAITLCDNTPGPA 72
Query: 85 AAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLL 144
A + +A+ +++ + I + +D A E+ ++ ++ LG++ L
Sbjct: 73 ARLLGAAILAYERG-----------DEDIRQAIDDAALEEMPKLERHINLLGTIGFVMPL 121
Query: 145 VGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIES----LISILLGLCVSIPSSIAYNKFI 200
+G LG VLGMM FQ + +S I E+ LI+ L V+IP IAYN +
Sbjct: 122 IGFLGTVLGMMRAFQV---AANAEALSAERISEAVNMALITTASALVVAIPCYIAYNYLV 178
Query: 201 EDSKKFAMQMEGFANEFSAILSRQ 224
+ ME + E R+
Sbjct: 179 ARVNSITLDMEKASLEIMNFFERR 202
>gi|255020534|ref|ZP_05292598.1| MotA/TolQ/ExbB proton channel family protein [Acidithiobacillus
caldus ATCC 51756]
gi|254970054|gb|EET27552.1| MotA/TolQ/ExbB proton channel family protein [Acidithiobacillus
caldus ATCC 51756]
Length = 205
Score = 105 bits (263), Expect = 4e-21, Method: Composition-based stats.
Identities = 43/181 (23%), Positives = 76/181 (41%), Gaps = 16/181 (8%)
Query: 45 KSVNFITLRRQFREFEQL---FWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDK 101
+ R R + ++ K L + + LA I ++A+ + +
Sbjct: 32 RLWVLRRARIAPRGLVERVGELVEAGKVQQAVKILYEN-DTPLARILLTALQQAGQPR-- 88
Query: 102 GARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI 161
D I M++ A +E+ + L+FLGS++ L+G+LG V+G+M F +I
Sbjct: 89 ---------DVIKEMVEEAGRQEVAHLDRYLNFLGSIAGVAPLLGLLGTVIGIMHAFAAI 139
Query: 162 AGYYSNN-VVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAI 220
+ GI E+LI+ GL V+IPS + Y F + + E A + +
Sbjct: 140 GMVGMGDPKALAGGIAEALITTAGGLSVAIPSLLFYRYFRGRVETLVLATEKEALKLINL 199
Query: 221 L 221
L
Sbjct: 200 L 200
>gi|330955557|gb|EGH55817.1| biopolymer transport protein ExbB [Pseudomonas syringae Cit 7]
Length = 139
Score = 105 bits (263), Expect = 4e-21, Method: Composition-based stats.
Identities = 31/134 (23%), Positives = 58/134 (43%), Gaps = 5/134 (3%)
Query: 21 GLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHH 80
+ V ++ L +FS+LSW++++ KS ++ + Q ++F + FWS L T + +
Sbjct: 7 SMIVPAVLWALILFSVLSWALLLIKSAQYVRQKSQNKQFTKAFWSAPDLLTAAEHSAQYP 66
Query: 81 NIGLAAIFMSAMSEWK----KSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLG 136
LA I S + I DR++R + I +E + + L
Sbjct: 67 G-ALARIANSGFEAMAVDESPRTTQQLAHTINRSDRLERNLRQQIQKERRALESGQAILA 125
Query: 137 SMSSAGLLVGILGA 150
S+ S +G+ G
Sbjct: 126 SIGSTAPFIGLFGT 139
>gi|19705139|ref|NP_602634.1| biopolymer transport exbB protein [Fusobacterium nucleatum subsp.
nucleatum ATCC 25586]
gi|19713074|gb|AAL93933.1| Biopolymer transport exbB protein [Fusobacterium nucleatum subsp.
nucleatum ATCC 25586]
Length = 187
Score = 105 bits (263), Expect = 4e-21, Method: Composition-based stats.
Identities = 39/149 (26%), Positives = 63/149 (42%), Gaps = 12/149 (8%)
Query: 72 VCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEK 131
S K+ ++ L I + E K++ A G + I+R ++ +
Sbjct: 46 ALNSNKSSTSVVLKEILIYGYKENKETL--SALEEKGKEKAIER---------IKSLERN 94
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSI 190
+ L ++A L+G+LG V GM+ F SIA + + V GI E+L + GL V+I
Sbjct: 95 MWLLSLAANASPLLGLLGTVTGMIKAFNSIALNGTGDAGVLAKGISEALYTTAGGLIVAI 154
Query: 191 PSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
P I YN F + +E E
Sbjct: 155 PCMIFYNYFNKKIDLIVSDIEKTCTELLN 183
>gi|145220183|ref|YP_001130892.1| MotA/TolQ/ExbB proton channel [Prosthecochloris vibrioformis DSM
265]
gi|145206347|gb|ABP37390.1| outer membrane transport energization protein ExbB [Chlorobium
phaeovibrioides DSM 265]
Length = 248
Score = 105 bits (263), Expect = 4e-21, Method: Composition-based stats.
Identities = 43/208 (20%), Positives = 88/208 (42%), Gaps = 9/208 (4%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQ--FREFEQLFWSGQSL 69
S+F Q G V ++ L + I + +++ + Q EF Q
Sbjct: 32 SMFHAVSQGGPVV-SVLMALILMVI---AYAVERVIALNKAAGQGNIPEFVQAIKQDIDG 87
Query: 70 ETVCKSLK--NHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
V +++ + H L A+ S + + + +++ ++ A E+
Sbjct: 88 GDVNRAIARCDEHQSSLGAVIRSVLDRYNSMAALQVTDRDKMISEMEKAVEEATTMEMPL 147
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISILLGL 186
+ + L + +++S +VG+LG LGM+ FQ++A + + V + GI E+L + LG+
Sbjct: 148 LEKNLVAISTIASISTMVGLLGTTLGMIRAFQAMATSGAPDAVQLSLGISEALFNTALGI 207
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFA 214
I + YN F +F+ ++ A
Sbjct: 208 VGGILGIVTYNIFTSRVDRFSYLIDEAA 235
>gi|300771684|ref|ZP_07081559.1| biopolymer transporter [Sphingobacterium spiritivorum ATCC 33861]
gi|300761673|gb|EFK58494.1| biopolymer transporter [Sphingobacterium spiritivorum ATCC 33861]
Length = 276
Score = 105 bits (263), Expect = 4e-21, Method: Composition-based stats.
Identities = 38/206 (18%), Positives = 78/206 (37%), Gaps = 11/206 (5%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRR-----QFREFEQLFWSG 66
+ + G V I+ LF+ W I++ + F Q +G
Sbjct: 61 NYLGMVYHAGAIVP-ILIGLFLM---VWVFSIERLIVINKASGTGNVGNFVRKVQTLING 116
Query: 67 QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
+++T +A + + + ++K I + ++ A E+
Sbjct: 117 GNIDTAIAECDKQKGS-VANVIKAGLLKYKDVSANPGLDSEKSALAIQKEIEETTALEMP 175
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV-SIPGIIESLISILLG 185
+ + L+ + ++ S G L G+LG V GM+ F ++A + + GI E+LI+ G
Sbjct: 176 MLEKNLNVIATLVSIGTLTGLLGTVTGMIKAFSALATGGAPDSAKLANGISEALINTATG 235
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQME 211
+ S + + YN K ++
Sbjct: 236 IATSTFAIVMYNILTAKIDKLTYSID 261
>gi|78187442|ref|YP_375485.1| MotA/TolQ/ExbB proton channel family protein [Chlorobium luteolum
DSM 273]
gi|78167344|gb|ABB24442.1| outer membrane transport energization protein ExbB [Chlorobium
luteolum DSM 273]
Length = 248
Score = 105 bits (263), Expect = 5e-21, Method: Composition-based stats.
Identities = 40/209 (19%), Positives = 88/209 (42%), Gaps = 11/209 (5%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITL--RRQFREFEQLFWS---G 66
S+F + G V ++ L + I + +++ + + EF Q
Sbjct: 32 SMFHAVWKGGPVV-SVLMALILMVI---AYTVERIIALNKAAGKGNIPEFVQGIKQDINS 87
Query: 67 QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
++ +H + L A+ S + + + +++ ++ A E+
Sbjct: 88 GDIQGAIARCDDHQSS-LGAVLRSVLDRYTQLAAFNVTDRDKKISEMEKAVEEASTMEMP 146
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISILLG 185
+ + L + +++S +VG+LG +GM+ FQ++A + + V + GI E+L + LG
Sbjct: 147 LLEKNLVAISTIASISTMVGLLGTTMGMIRAFQAMATSGAPDAVQLSLGISEALFNTALG 206
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFA 214
+ I +AYN F +F+ ++ A
Sbjct: 207 IVGGILGIVAYNIFTTRVDRFSYMIDEAA 235
>gi|237717528|ref|ZP_04548009.1| MotA/TolQ/ExbB proton channel [Bacteroides sp. 2_2_4]
gi|260175235|ref|ZP_05761647.1| MotA/TolQ/ExbB proton channel [Bacteroides sp. D2]
gi|293373390|ref|ZP_06619745.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Bacteroides ovatus SD CMC 3f]
gi|315923467|ref|ZP_07919707.1| MotA/TolQ/ExbB proton channel [Bacteroides sp. D2]
gi|229453158|gb|EEO58949.1| MotA/TolQ/ExbB proton channel [Bacteroides sp. 2_2_4]
gi|292631528|gb|EFF50151.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Bacteroides ovatus SD CMC 3f]
gi|313697342|gb|EFS34177.1| MotA/TolQ/ExbB proton channel [Bacteroides sp. D2]
Length = 265
Score = 105 bits (263), Expect = 5e-21, Method: Composition-based stats.
Identities = 41/218 (18%), Positives = 91/218 (41%), Gaps = 14/218 (6%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITL--RRQFRE 58
MNN +++ + G+ V I TLL LS I++ + + +
Sbjct: 41 MNNDP-NNHPLNMLGTIYKGGIIVPIIQTLLLTVLALS----IERYFALRSAFGKGSLSK 95
Query: 59 FEQLFWSGQSLETV----CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRID 114
F L + + + +A + S + ++++ A I
Sbjct: 96 FVANIKDA--LAAGDMKKAQEICDKQRGSVANVVTSTLRKYEEMEKNTALPKEQKLLAIQ 153
Query: 115 RMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP- 173
+ ++ A A E+ + + L + ++++ G L+G+LG V+GM+ F +++ + +++
Sbjct: 154 KELEEATALEMPMMQQNLPIIATITTLGTLMGLLGTVIGMIRSFAALSAGGGADSMALSQ 213
Query: 174 GIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
GI E+LI+ G+ + I+YN + K ++
Sbjct: 214 GISEALINTAFGILTGALAVISYNYYTNKIDKLTYGLD 251
>gi|254447971|ref|ZP_05061435.1| MotA/TolQ/ExbB proton channel [gamma proteobacterium HTCC5015]
gi|198262397|gb|EDY86678.1| MotA/TolQ/ExbB proton channel [gamma proteobacterium HTCC5015]
Length = 203
Score = 105 bits (263), Expect = 5e-21, Method: Composition-based stats.
Identities = 42/218 (19%), Positives = 84/218 (38%), Gaps = 18/218 (8%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
+ +F G + + + +L+ +II++ R + W + V
Sbjct: 1 MLEIFKAGGWL----MWPILLSWVLALGIIIERFWALKGDRVLPKSLVADIWKMVKNDEV 56
Query: 73 C-KSLKN-HHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
+ +KN + L + + + S + + ++ E+
Sbjct: 57 DDQRIKNIYEGSPLGRVLAVGLINREHSR-----------EVMKETIEETGRHVAHELER 105
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVS 189
L+ LG++++ L+G+LG V+GM+ F I + GI ++LI+ G+ V+
Sbjct: 106 FLNALGTIAAITPLMGLLGTVIGMIQVFAVITSSGVGDPGALAGGISQALITTAAGIGVA 165
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEG 227
IPS I Y F + ME A + +L + E
Sbjct: 166 IPSMIFYRYFRARVDALIIGMEQEAIKLVEVLQGEREA 203
>gi|237713971|ref|ZP_04544452.1| MotA/TolQ/ExbB proton channel [Bacteroides sp. D1]
gi|262409120|ref|ZP_06085664.1| MotA/TolQ/ExbB proton channel [Bacteroides sp. 2_1_22]
gi|294647405|ref|ZP_06724995.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Bacteroides ovatus SD CC 2a]
gi|294807921|ref|ZP_06766701.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Bacteroides xylanisolvens SD CC 1b]
gi|298482210|ref|ZP_07000397.1| MotA/TolQ/ExbB proton channel family protein [Bacteroides sp. D22]
gi|299149482|ref|ZP_07042538.1| MotA/TolQ/ExbB proton channel family protein [Bacteroides sp.
3_1_23]
gi|229446127|gb|EEO51918.1| MotA/TolQ/ExbB proton channel [Bacteroides sp. D1]
gi|262352867|gb|EEZ01963.1| MotA/TolQ/ExbB proton channel [Bacteroides sp. 2_1_22]
gi|292637266|gb|EFF55694.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Bacteroides ovatus SD CC 2a]
gi|294444859|gb|EFG13546.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Bacteroides xylanisolvens SD CC 1b]
gi|295085246|emb|CBK66769.1| outer membrane transport energization protein ExbB (TC 2.C.1.1.1)
[Bacteroides xylanisolvens XB1A]
gi|298271497|gb|EFI13071.1| MotA/TolQ/ExbB proton channel family protein [Bacteroides sp. D22]
gi|298512512|gb|EFI36405.1| MotA/TolQ/ExbB proton channel family protein [Bacteroides sp.
3_1_23]
Length = 265
Score = 105 bits (263), Expect = 5e-21, Method: Composition-based stats.
Identities = 40/218 (18%), Positives = 91/218 (41%), Gaps = 14/218 (6%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITL--RRQFRE 58
MNN +++ + G+ V I TLL LS I++ + + +
Sbjct: 41 MNNDP-NNHPLNMLGTIYKGGIIVPIIQTLLLTVLALS----IERYFALRSAFGKGSLSK 95
Query: 59 FEQLFWSGQSLETV----CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRID 114
F L + + + +A + S + ++++ + I
Sbjct: 96 FVANIKDA--LAAGDMKKAQEICDKQRGSVANVVTSTLRKYEEMEKNTSLPKEQKLLAIQ 153
Query: 115 RMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP- 173
+ ++ A A E+ + + L + ++++ G L+G+LG V+GM+ F +++ + +++
Sbjct: 154 KELEEATALEMPMMQQNLPIIATITTLGTLMGLLGTVIGMIRSFAALSAGGGADSMALSQ 213
Query: 174 GIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
GI E+LI+ G+ + I+YN + K ++
Sbjct: 214 GISEALINTAFGILTGALAVISYNYYTNKIDKLTYGLD 251
>gi|227535977|ref|ZP_03966026.1| MotA/TolQ/ExbB proton channel [Sphingobacterium spiritivorum ATCC
33300]
gi|227244220|gb|EEI94235.1| MotA/TolQ/ExbB proton channel [Sphingobacterium spiritivorum ATCC
33300]
Length = 276
Score = 105 bits (263), Expect = 5e-21, Method: Composition-based stats.
Identities = 38/206 (18%), Positives = 78/206 (37%), Gaps = 11/206 (5%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRR-----QFREFEQLFWSG 66
+ + G V I+ LF+ W I++ + F Q +G
Sbjct: 61 NYLGMVYHAGAIVP-ILIGLFLM---VWVFSIERLIVINKASGTGNVGNFVRKVQTLING 116
Query: 67 QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
+++T +A + + + ++K I + ++ A E+
Sbjct: 117 GNIDTAIAECDKQKGS-VANVIKAGLLKYKDVSANPGLDSEKSALAIQKEIEETTALEMP 175
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV-SIPGIIESLISILLG 185
+ + L+ + ++ S G L G+LG V GM+ F ++A + + GI E+LI+ G
Sbjct: 176 MLEKNLNVIATLVSIGTLTGLLGTVTGMIKAFSALATGGAPDSAKLANGISEALINTATG 235
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQME 211
+ S + + YN K ++
Sbjct: 236 IATSTFAIVMYNILTAKIDKLTYSID 261
>gi|196234529|ref|ZP_03133352.1| MotA/TolQ/ExbB proton channel [Chthoniobacter flavus Ellin428]
gi|196221409|gb|EDY15956.1| MotA/TolQ/ExbB proton channel [Chthoniobacter flavus Ellin428]
Length = 255
Score = 105 bits (263), Expect = 5e-21, Method: Composition-based stats.
Identities = 45/224 (20%), Positives = 80/224 (35%), Gaps = 28/224 (12%)
Query: 6 LAIMDI-SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFIT-------LRRQFR 57
LA + + S F F G + L + S +S +VI+ + + L R+
Sbjct: 5 LAAVSLKSAFHFFYNGGFF----MLPLLLCSWVSVAVIVLRGLALRRDVVIPPMLEREV- 59
Query: 58 EFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMM 117
+ LA + S + G + +
Sbjct: 60 -------------EGIQPGDEDAANRLAKLVRHDRSTAARIIQVGLEHLTWPKSENMEAV 106
Query: 118 DVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAG--YYSNNVVSIPGI 175
E+ + + L + L+G+LGAV G++ F + + GI
Sbjct: 107 QTRARHEIVRLESGIFVLEIIVGIAPLLGLLGAVSGLISVFGAFGADSATQDPHGIAKGI 166
Query: 176 IESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
E+L + ++GL V+IPS IAY+ F + + A +ME E +
Sbjct: 167 SEALSTTIVGLAVAIPSLIAYSYFTKKVETMAAEMESLVAELLS 210
>gi|78357196|ref|YP_388645.1| TolQ-like transport protein [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
gi|78219601|gb|ABB38950.1| outer membrane transport energization protein ExbB [Desulfovibrio
desulfuricans subsp. desulfuricans str. G20]
Length = 474
Score = 105 bits (262), Expect = 5e-21, Method: Composition-based stats.
Identities = 47/213 (22%), Positives = 82/213 (38%), Gaps = 20/213 (9%)
Query: 17 FMQ-MGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS---GQSLETV 72
++Q GL V II + I++ ++I++ LR Q S +
Sbjct: 264 WLQTGGLLVWPIILV----GIIALGLVIERFYTLGRLRGNSDRNMQTILSMIRARKWHEC 319
Query: 73 CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKL 132
+ N I ++ I+ A+ +EL + L
Sbjct: 320 QEFCARASNFPTCRI-----------IGHTLGYMGATREIIENAYQEAMLKELPVLERFL 368
Query: 133 SFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCVSIP 191
L +++ L+G+LG V GM+ FQ+I Y + + + GI E+LI+ LGL V++P
Sbjct: 369 PTLSVLAAVAPLLGLLGTVTGMINTFQTITLYGTGDPRMMSGGISEALITTQLGLAVAVP 428
Query: 192 SSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
I ++ ME F+ L +Q
Sbjct: 429 IMILHHILERRVDALMGDMEEKGTSFTVALMQQ 461
>gi|116329668|ref|YP_799387.1| TolQ-like transport protein [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
gi|116332553|ref|YP_802270.1| TolQ-like transport protein [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
gi|116122561|gb|ABJ80454.1| TolQ-like transport protein [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
gi|116127420|gb|ABJ77512.1| TolQ-like transport protein [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
Length = 204
Score = 105 bits (262), Expect = 5e-21, Method: Composition-based stats.
Identities = 41/202 (20%), Positives = 79/202 (39%), Gaps = 13/202 (6%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLET--VCKSLKNHHNIG 83
I ++ + SI++ +V ++ + F R + S K++ + H
Sbjct: 12 FIFIVMLVASIIALAVGTERILIFRRNLRNTDVVLPILTSEIRKGDFGAIKTVASEHPTN 71
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
+ + K + + + + + I E E+ L L ++ +
Sbjct: 72 I----------YAKFSQFSTENYEVGHEALAELQEGKIIGERVELENHLPILNTLGNNAP 121
Query: 144 LVGILGAVLGMMGFFQSIAGYYSNNVV-SIPGIIESLISILLGLCVSIPSSIAYNKFIED 202
+G+LG VLG++ F + S + I +L++ GL V+IP +A N F
Sbjct: 122 FIGLLGTVLGVIKAFYGLGTLGSTGAEFVMRSISTALLATAAGLGVAIPVVMANNYFTRK 181
Query: 203 SKKFAMQMEGFANEFSAILSRQ 224
K +E + EF A LSR+
Sbjct: 182 LKVIQANLEILSKEFLASLSRK 203
>gi|24217342|ref|NP_714825.1| transport protein ExbB [Leptospira interrogans serovar Lai str.
56601]
gi|45655796|ref|YP_003605.1| ExbB [Leptospira interrogans serovar Copenhageni str. Fiocruz
L1-130]
gi|24202416|gb|AAN51840.1| TolQ-like transport protein [Leptospira interrogans serovar Lai
str. 56601]
gi|45602767|gb|AAS72242.1| ExbB [Leptospira interrogans serovar Copenhageni str. Fiocruz
L1-130]
Length = 204
Score = 105 bits (262), Expect = 6e-21, Method: Composition-based stats.
Identities = 43/201 (21%), Positives = 82/201 (40%), Gaps = 11/201 (5%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLA 85
I ++ + SI++ +V ++ + F RR + E + L + ++ +
Sbjct: 12 FIFVVMLVASIVALAVGTERILIF---RRNLKNTEAI------LPVLTSEIRKGDFSAVK 62
Query: 86 AIFMSAMSE-WKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLL 144
+I + K A + + + + I E E+ L L ++ +
Sbjct: 63 SIASENHGNIYAKFSQFSAEHYEVGHEALSELQEGKIIGERIELENHLPILNTLGNNAPF 122
Query: 145 VGILGAVLGMMGFFQSIAGYYSNNVV-SIPGIIESLISILLGLCVSIPSSIAYNKFIEDS 203
+G+LG VLG++ F + S + I +L++ GL V+IP +A N F
Sbjct: 123 IGLLGTVLGVIKAFYGLGTLGSTGAEFVMRSISTALLATAAGLGVAIPVVMANNYFTRKL 182
Query: 204 KKFAMQMEGFANEFSAILSRQ 224
K +E + EF A LSR+
Sbjct: 183 KVIQANLEILSKEFLASLSRK 203
>gi|327539542|gb|EGF26152.1| biopolymer transport ExbB-related protein [Rhodopirellula baltica
WH47]
Length = 351
Score = 105 bits (262), Expect = 6e-21, Method: Composition-based stats.
Identities = 40/202 (19%), Positives = 88/202 (43%), Gaps = 16/202 (7%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV----CKSLKNHHNIG 83
+ L I S++ + +++ ++ R + F + F + S+ + +
Sbjct: 144 MIPLAICSLIVLGLSMERLISLRRSRVIPKPFVRRFTECVEDGQLSYEEATSICDEFDCP 203
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
+A +F +A+ W + + ++ I DR+ + + L ++S+
Sbjct: 204 VAEVFHAAVRRWGRPMLEIEQAVIDAGDRVG-----------DSLRRFLRVFHAISNVTP 252
Query: 144 LVGILGAVLGMMGFFQSIA-GYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIED 202
L+G+LG VLGM+ F++IA + + GI +L++ GL V+IP+ +AY F
Sbjct: 253 LIGLLGTVLGMIQAFETIADPSAGESDLLASGISTALMTTAGGLSVAIPAYLAYMYFGAK 312
Query: 203 SKKFAMQMEGFANEFSAILSRQ 224
S + +++ +S +
Sbjct: 313 SDGYLGEIDKLCQRVIDCISAE 334
>gi|126641598|ref|YP_001084582.1| MotA/TolQ/ExbB proton channel [Acinetobacter baumannii ATCC 17978]
Length = 168
Score = 105 bits (262), Expect = 6e-21, Method: Composition-based stats.
Identities = 37/145 (25%), Positives = 76/145 (52%), Gaps = 12/145 (8%)
Query: 78 NHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGS 137
N + L I + E ++ ++ AR+ M+ ++E+ + + ++FLG+
Sbjct: 20 NAQSTALGNILKAGF-EHQEHGEQFARAQ----------MEAMASQEISYLEKNINFLGT 68
Query: 138 MSSAGLLVGILGAVLGMMGFFQSIA-GYYSNNVVSIPGIIESLISILLGLCVSIPSSIAY 196
+S+ L+G+LG V+G++ F I G + + IPGI ++LI+ +G+ ++IP+ I+Y
Sbjct: 69 LSAIAPLLGLLGTVVGIIESFLVIDFGSAGSPSLMIPGISKALITTAVGMLIAIPALISY 128
Query: 197 NKFIEDSKKFAMQMEGFANEFSAIL 221
F + + ++E + F A L
Sbjct: 129 RYFQRVVQDYIAELEQQSTLFHASL 153
>gi|95931354|ref|ZP_01314067.1| MotA/TolQ/ExbB proton channel [Desulfuromonas acetoxidans DSM 684]
gi|95132597|gb|EAT14283.1| MotA/TolQ/ExbB proton channel [Desulfuromonas acetoxidans DSM 684]
Length = 184
Score = 105 bits (262), Expect = 6e-21, Method: Composition-based stats.
Identities = 45/188 (23%), Positives = 80/188 (42%), Gaps = 18/188 (9%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAI 87
+ L + S+L W++I+ K V L R + S + + + L N + L+ +
Sbjct: 1 MLPLAVVSLLLWALIVHKLVTLKALYRPTK----------SEDHMVRVLDNAGHAVLSGV 50
Query: 88 FMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGI 147
+ E+ + A+ I D A + L+ +G +++ L+G+
Sbjct: 51 QGQLIREFFRRRSGDAQLDSHIVD-------EASMAVSHPLERGLTLIGVLAAIAPLLGL 103
Query: 148 LGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKF 206
LG V+GM+ F SIA + + N GI E+LI+ GL ++IP N +
Sbjct: 104 LGTVVGMIATFNSIAVFGTGNARAMAGGISEALITTQTGLLIAIPGLYMRNFLQRRAGNL 163
Query: 207 AMQMEGFA 214
Q+E A
Sbjct: 164 KHQVESLA 171
>gi|332526255|ref|ZP_08402384.1| putative biopolymer transport exbB-like transmembrane protein
[Rubrivivax benzoatilyticus JA2]
gi|332110089|gb|EGJ10717.1| putative biopolymer transport exbB-like transmembrane protein
[Rubrivivax benzoatilyticus JA2]
Length = 212
Score = 104 bits (261), Expect = 7e-21, Method: Composition-based stats.
Identities = 47/214 (21%), Positives = 82/214 (38%), Gaps = 14/214 (6%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLF--WSGQSLE 70
+ + G I LL + SI++ ++I+++ + T S SL
Sbjct: 1 MLTIIQAAGWP----IWLLILCSIVALALIMERLYHLRTPLIAPPTLLDEVIGVSRNSLP 56
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
K N L + + + P + + + M+ A +
Sbjct: 57 AQDVVAKLADNSLLGGVLAAGLQAV-------IADPRIQEQALRQAMENAGRTAVHTTER 109
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVS-IPGIIESLISILLGLCVS 189
L+ LG++++A L+G+ G V+GM+ F S A + N GI +L + GL ++
Sbjct: 110 YLNTLGTIAAAAPLLGLFGTVIGMIEIFGSQAPTGATNPQMLAHGISVALYNTAFGLIIA 169
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
IPS + Y F F + ME A L R
Sbjct: 170 IPSLMFYRYFRGRVDAFQLTMELAAERLVPHLMR 203
>gi|197121919|ref|YP_002133870.1| MotA/TolQ/ExbB proton channel [Anaeromyxobacter sp. K]
gi|196171768|gb|ACG72741.1| MotA/TolQ/ExbB proton channel [Anaeromyxobacter sp. K]
Length = 221
Score = 104 bits (261), Expect = 7e-21, Method: Composition-based stats.
Identities = 50/215 (23%), Positives = 90/215 (41%), Gaps = 18/215 (8%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
+F LF + G + ++ LL S+ S ++I+++ F R L +G+ LE
Sbjct: 5 LFHLFTRAG--AEWVMFLLAALSVASVTLILERLAWFARRRAPVPGLLPLLRAGR-LEEA 61
Query: 73 CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKL 132
L+ GL A A + D P + + + AIA L
Sbjct: 62 --RLRVGRLRGLEAEVARA------ALDAAEGGPASVHEAVA----CAIAEARPGYERAL 109
Query: 133 SFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG---IIESLISILLGLCVS 189
SFLG++ + +G+ G V+G++ F +A + I E+L++ G+ V+
Sbjct: 110 SFLGTLGNNAPFLGLFGTVIGVIQAFSDLAVGGPRGAGAAAVMAGISEALVATAAGILVA 169
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
IP+ +A+N + K + E + +A L R
Sbjct: 170 IPAVVAFNGYQRWLKALVQRAEAIEHALAAHLERD 204
>gi|32471265|ref|NP_864258.1| biopolymer transport ExbB-related protein [Rhodopirellula baltica
SH 1]
gi|32396967|emb|CAD71937.1| probable biopolymer transport ExbB-related protein [Rhodopirellula
baltica SH 1]
Length = 351
Score = 104 bits (261), Expect = 7e-21, Method: Composition-based stats.
Identities = 40/202 (19%), Positives = 88/202 (43%), Gaps = 16/202 (7%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV----CKSLKNHHNIG 83
+ L I S++ + +++ ++ R + F + F + S+ + +
Sbjct: 144 MIPLAICSLIVLGLSMERLISLRRSRVIPKPFVRRFTECVEDGQLSYEEATSICDEFDCP 203
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
+A +F +A+ W + + ++ I DR+ + + L ++S+
Sbjct: 204 VAEVFHAAVRRWGRPMLEIEQAVIDAGDRVG-----------DSLRRFLRVFHAISNVTP 252
Query: 144 LVGILGAVLGMMGFFQSIA-GYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIED 202
L+G+LG VLGM+ F++IA + + GI +L++ GL V+IP+ +AY F
Sbjct: 253 LIGLLGTVLGMIQAFETIADPSAGESDLLASGISTALMTTAGGLSVAIPAYLAYMYFGAK 312
Query: 203 SKKFAMQMEGFANEFSAILSRQ 224
S + +++ +S +
Sbjct: 313 SDGYLGEIDKLCQRVIDCISAE 334
>gi|311107322|ref|YP_003980175.1| MotA/TolQ/ExbB proton channel family protein 3 [Achromobacter
xylosoxidans A8]
gi|310762011|gb|ADP17460.1| MotA/TolQ/ExbB proton channel family protein 3 [Achromobacter
xylosoxidans A8]
Length = 207
Score = 104 bits (261), Expect = 8e-21, Method: Composition-based stats.
Identities = 34/214 (15%), Positives = 78/214 (36%), Gaps = 21/214 (9%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITL----RRQFREFEQLFWSGQS 68
+ ++ + G I L S+L ++I ++ ++ R + ++ + Q
Sbjct: 1 MLSILREAGWP----IWPLLATSVLGLALIFERFLSLRRGLVMPRGLSDQVAEMLRNRQD 56
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
L+ N L I M + + +++ ++
Sbjct: 57 TPESINRLE--RNSPLGRILADVMRHRHLPR-----------EELRNVVEDTGRAVAHDL 103
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCV 188
+ + +G+++ L+G+ G V+GM+ F S + GI +L + G+ +
Sbjct: 104 SRYIPAIGTIAVVAPLMGLFGTVVGMIEIFGSYTPGGGDPAQLARGISMALYNTGFGILI 163
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
+IP+ IA+ + ME A+ +S
Sbjct: 164 AIPAMIAHRYLRSRVDGYLSAMEQAASRLVRAVS 197
>gi|323698928|ref|ZP_08110840.1| MotA/TolQ/ExbB proton channel [Desulfovibrio sp. ND132]
gi|323458860|gb|EGB14725.1| MotA/TolQ/ExbB proton channel [Desulfovibrio desulfuricans ND132]
Length = 196
Score = 104 bits (260), Expect = 9e-21, Method: Composition-based stats.
Identities = 44/188 (23%), Positives = 83/188 (44%), Gaps = 13/188 (6%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAI 87
+ L I S+ + +VI+++ V F T + F SGQ+L+T+ ++ +
Sbjct: 11 MWPLLILSVAALAVILERLVVFTT---------RRFPSGQALDTLLETFRTQGRAAAMDG 61
Query: 88 FMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGI 147
+ ++ + A L +L FL + ++ L+G+
Sbjct: 62 VEETAPTFAPFFAACFSPDRAHREA---AIQAAGDEVLFGFNARLDFLSTAAATAPLMGL 118
Query: 148 LGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKF 206
LG VLGM+ F +A ++ V GI ++L++ GLC++IP+ +A+ F + K
Sbjct: 119 LGTVLGMINAFSRLASSADVDITVLAGGIWQALLTTAAGLCIAIPAVLAHRWFCREYDKI 178
Query: 207 AMQMEGFA 214
A M+ A
Sbjct: 179 AHAMQHAA 186
>gi|220916712|ref|YP_002492016.1| MotA/TolQ/ExbB proton channel [Anaeromyxobacter dehalogenans 2CP-1]
gi|219954566|gb|ACL64950.1| MotA/TolQ/ExbB proton channel [Anaeromyxobacter dehalogenans 2CP-1]
Length = 221
Score = 104 bits (260), Expect = 9e-21, Method: Composition-based stats.
Identities = 49/215 (22%), Positives = 89/215 (41%), Gaps = 18/215 (8%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
+F LF + G + ++ LL S+ S ++I+++ F R L +G+ LE
Sbjct: 5 LFHLFTRAG--AEWVMFLLAALSVASVTLILERLAWFARRRAPVPGLLPLLRAGR-LEEA 61
Query: 73 CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKL 132
+ GL A A + D P + + + AIA L
Sbjct: 62 RLRVGQLR--GLEAEVARA------AIDAAEGGPASVHEAVA----CAIAEARPGYERAL 109
Query: 133 SFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG---IIESLISILLGLCVS 189
SFLG++ + +G+ G V+G++ F +A + I E+L++ G+ V+
Sbjct: 110 SFLGTLGNNAPFLGLFGTVIGVIQAFSDLAVGGPRGAGAAAVMAGISEALVATAAGILVA 169
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
IP+ +A+N + K + E + +A L R
Sbjct: 170 IPAVVAFNGYQRWLKALVQRAEAIEHALAAHLERD 204
>gi|328953805|ref|YP_004371139.1| MotA/TolQ/ExbB proton channel [Desulfobacca acetoxidans DSM 11109]
gi|328454129|gb|AEB09958.1| MotA/TolQ/ExbB proton channel [Desulfobacca acetoxidans DSM 11109]
Length = 179
Score = 104 bits (260), Expect = 9e-21, Method: Composition-based stats.
Identities = 46/192 (23%), Positives = 87/192 (45%), Gaps = 32/192 (16%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAI 87
+ + + S+++ ++ I KS+ + +RR G+SLE +++ H + LA +
Sbjct: 12 MWPILLCSVIALAITINKSIQYFRVRRDI---------GRSLE----AIQEHGSTYLAPV 58
Query: 88 FMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGI 147
+ +G DR + +A +REL+ + L L ++ L+G+
Sbjct: 59 LQA--------VQQGLD---------DRQISLAGSRELKTLESGLGSLNLIAVIAPLLGL 101
Query: 148 LGAVLGMMGFFQSIAGYYSN--NVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKK 205
G V GM+ FQ IA +N + GI E+LI+ GL V IP+ +A + +
Sbjct: 102 TGTVTGMIKAFQVIATMGTNVDPSLLAAGIWEALITTAAGLFVGIPTHVAAHYLDRSLDE 161
Query: 206 FAMQMEGFANEF 217
A++M+ +
Sbjct: 162 VALRMKEIILDL 173
>gi|298373799|ref|ZP_06983788.1| MotA/TolQ/ExbB proton channel family protein [Bacteroidetes oral
taxon 274 str. F0058]
gi|298274851|gb|EFI16403.1| MotA/TolQ/ExbB proton channel family protein [Bacteroidetes oral
taxon 274 str. F0058]
Length = 268
Score = 104 bits (260), Expect = 9e-21, Method: Composition-based stats.
Identities = 42/217 (19%), Positives = 97/217 (44%), Gaps = 14/217 (6%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLR------RQFREFEQL 62
I++ + G V I+TLLF +LS +++ + + ++
Sbjct: 51 HPINLLGTMFKGGFVVPLILTLLFTVIVLS----VERFFALNKAKGKGNLIKFVANVKKE 106
Query: 63 FWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIA 122
+G +++ + L +AAI + ++++++ + S + I ++ A A
Sbjct: 107 LANG-NIDNA-QKLCEKQQGSVAAIVDAGLTKYRE-VESLDISKEMKVEAIKNEIEEATA 163
Query: 123 RELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLIS 181
+L + + L + ++S+ G L+G+ G VLGM+ FQ++AG + +++ GI E+L++
Sbjct: 164 LQLPSMQQNLPIIATISTLGTLMGLFGTVLGMIRSFQALAGAGGVDSMALSVGISEALVN 223
Query: 182 ILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFS 218
G+ + I+Y + +E + +
Sbjct: 224 TASGIATGALAIISYAFYSGKVDNMTYAIEEVSFALA 260
>gi|242279552|ref|YP_002991681.1| MotA/TolQ/ExbB proton channel [Desulfovibrio salexigens DSM 2638]
gi|242122446|gb|ACS80142.1| MotA/TolQ/ExbB proton channel [Desulfovibrio salexigens DSM 2638]
Length = 474
Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats.
Identities = 47/222 (21%), Positives = 88/222 (39%), Gaps = 17/222 (7%)
Query: 6 LAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS 65
LA SI GL V II + I ++ ++I++ +R
Sbjct: 254 LAQQQKSIQEWLSAGGLLVWPIIIV----GIAAFILVIERFYTLSRIRSNSDR------- 302
Query: 66 GQSLETVCKSLKNHHNIGLAAIFMSAMSEWK--KSCDKGARSPIGIQDRIDRMMDVAIAR 123
++ + K + N F + S + + ++ I+ + +
Sbjct: 303 --NMAKILKMIANDE-WDKCRSFCNEQSHYPTCRIIGHTLNYMGQAREIIENAFQEGLLK 359
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISI 182
EL + L L +++ L+G+LG V GM+ FQ I Y + + + GI E+L++
Sbjct: 360 ELPILERSLPTLNVLAAVAPLLGLLGTVTGMISTFQIITLYGTGDPRMMSGGISEALVTT 419
Query: 183 LLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
LGL V++P I ++ K ME + F+ L ++
Sbjct: 420 QLGLAVAVPIMILHHILDRRVDKIISDMEEKGSGFAVALMKK 461
>gi|284047704|ref|YP_003398043.1| MotA/TolQ/ExbB proton channel [Acidaminococcus fermentans DSM
20731]
gi|283951925|gb|ADB46728.1| MotA/TolQ/ExbB proton channel [Acidaminococcus fermentans DSM
20731]
Length = 212
Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats.
Identities = 33/206 (16%), Positives = 92/206 (44%), Gaps = 15/206 (7%)
Query: 14 FALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVC 73
+ F++ G+ ++ L + S++S ++I+++ F R++ + F +
Sbjct: 9 WMYFLRGGV----VMWPLLLCSLVSLTLILERGAFFRR-EDSGRDYPRTF------CRMV 57
Query: 74 KSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLS 133
+ + + ++ A +E + +P +++ ++ + + + + L+
Sbjct: 58 RQKQWQDLLAMSRRTRGAQAE---LGIRLLTAPPEAREKESYILGES-QQLVSRFDKGLN 113
Query: 134 FLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSS 193
+L + + ++G+LG + GMM FQ++ + N + G+ E++I+ + GL ++I +
Sbjct: 114 YLSVIVTLAPILGLLGTITGMMSSFQALGDRWDNPLGVTAGVAEAMITTVFGLLIAIGTI 173
Query: 194 IAYNKFIEDSKKFAMQMEGFANEFSA 219
+ F + ++E N F
Sbjct: 174 CFHTYFSQRVNTVLEEVEQMDNAFME 199
>gi|77918459|ref|YP_356274.1| TolR-like transport protein [Pelobacter carbinolicus DSM 2380]
gi|77544542|gb|ABA88104.1| outer membrane transport energization protein ExbB [Pelobacter
carbinolicus DSM 2380]
Length = 470
Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats.
Identities = 36/183 (19%), Positives = 74/183 (40%), Gaps = 15/183 (8%)
Query: 43 IQKSVNFITLRRQFREF---EQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSC 99
+++ + +R E S ET ++ H + + ++ +
Sbjct: 287 VERLLFLARVRHNTDELMTRVTALVSQGDWETALRATAPHRDQPTGRVLIAGL------- 339
Query: 100 DKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQ 159
+ ++ I+ + AI RE + LS L ++ L+G+LG V GM+ FQ
Sbjct: 340 ----QHRGENREIIESSLSEAILRETPRLERFLSALKVAAAVAPLLGLLGTVTGMINTFQ 395
Query: 160 SIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFS 218
I + +++ + GI E++++ +GL V+IP + + + K + ME
Sbjct: 396 VITTHGTSDPRLMAGGISEAMVTTQVGLAVAIPVMMIASFLGSRAHKLSQDMEEKGLALM 455
Query: 219 AIL 221
L
Sbjct: 456 GAL 458
>gi|121604827|ref|YP_982156.1| MotA/TolQ/ExbB proton channel [Polaromonas naphthalenivorans CJ2]
gi|120593796|gb|ABM37235.1| MotA/TolQ/ExbB proton channel [Polaromonas naphthalenivorans CJ2]
Length = 207
Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats.
Identities = 50/215 (23%), Positives = 93/215 (43%), Gaps = 15/215 (6%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREF--EQLFWSGQSLE 70
+F++ G I L SI++ ++II++ + TL+ + E + S +L
Sbjct: 1 MFSIIQAAGWP----IWPLLACSIVALALIIERFSSLKTLKVAPPKLLGEAMIVSRATLP 56
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
+ LK N L + S +P + + ++ A + ++
Sbjct: 57 SPDVVLKLEQNSLLGEVLASGFRAL-------GANPRISEADLRSTLEGAGRQAAHKLER 109
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGY--YSNNVVSIPGIIESLISILLGLCV 188
L+ L +++SA L+G+LG V+GM+ F + G +N GI +L + GL V
Sbjct: 110 YLAALATIASAAPLLGLLGTVIGMIEIFGAQTGSAGGANPAQLAQGISMALYNTAFGLMV 169
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
+IP+ I + F + + ME A +F L+R
Sbjct: 170 AIPALIFWRYFRARVDGYLLTMELAAEQFVRHLNR 204
>gi|294507700|ref|YP_003571758.1| MotA/TolQ/ExbB proton channel [Salinibacter ruber M8]
gi|294344028|emb|CBH24806.1| MotA/TolQ/ExbB proton channel [Salinibacter ruber M8]
Length = 248
Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats.
Identities = 37/208 (17%), Positives = 78/208 (37%), Gaps = 18/208 (8%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLET----VCKSLKNHHNIG 83
+ + I I+ ++ ++ ++ + F Q L+ +
Sbjct: 39 MWPVLICLIIGLAISFERIISLNRADINTQAFLQRVKEA--LDEGGIPAAEEECASTRGP 96
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
+A++F + + R+ GI D ++ + + E+ + L +L S
Sbjct: 97 VASVFQAGL----------LRADEGI-DAVEEAVVSYGSIEMSFLERGLVWLSLFISVAP 145
Query: 144 LVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIED 202
++G LG V+GM+ F SI + + GI +L++ GL V++ YN +
Sbjct: 146 MLGFLGTVIGMIEAFDSIEQAGDISPRLVAGGIKIALLTTAFGLIVAVILQFFYNYAVSK 205
Query: 203 SKKFAMQMEGFANEFSAILSRQTEGNIS 230
+ +ME + E L G +
Sbjct: 206 IDRLVAEMEDASIELVDALVALERGESA 233
>gi|258647071|ref|ZP_05734540.1| MotA/TolQ/ExbB proton channel family protein [Prevotella tannerae
ATCC 51259]
gi|260853189|gb|EEX73058.1| MotA/TolQ/ExbB proton channel family protein [Prevotella tannerae
ATCC 51259]
Length = 289
Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats.
Identities = 39/205 (19%), Positives = 84/205 (40%), Gaps = 9/205 (4%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITL--RRQFREFEQLFWSGQSL 69
++ + G V II LF ++ I++ + R +F
Sbjct: 75 NLMGTVYKGGFVVP-IIWTLFF---TVLALAIERFFALRSAYGRSSLTKFVAEIKKALRD 130
Query: 70 ETV--CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + + L + +A + +A+ +K+ + I + ++ A A E+
Sbjct: 131 KDLVKAQQLCDAQRGSVANVVGAALHSYKEMDANTEYTKEQKVLNIQKSLEEATALEMPM 190
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISILLGL 186
+ E L +G++ + G L+G+LG VLGM+ F ++ + ++ GI E+L++ G+
Sbjct: 191 LQENLPIIGTIVTLGTLMGLLGTVLGMIRSFSAMGAEGGADSSALSTGISEALVNTASGI 250
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQME 211
+ I YN F + ++
Sbjct: 251 ATGALAVITYNYFTNKIDRLTFALD 275
>gi|260424620|ref|ZP_05732695.2| MotA/TolQ/ExbB proton channel family protein [Dialister invisus DSM
15470]
gi|260402576|gb|EEW96123.1| MotA/TolQ/ExbB proton channel family protein [Dialister invisus DSM
15470]
Length = 208
Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats.
Identities = 41/213 (19%), Positives = 86/213 (40%), Gaps = 20/213 (9%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG---Q 67
+ LF G + L + SI+ ++ ++ + + R +
Sbjct: 7 MYFLHLFHAGGFM----MYPLLLCSIIVVAIFFERYRYYSSHRSDTERLSAVMTDSLDRG 62
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+E + +LK I A + +SA++ + G + +++ A A
Sbjct: 63 DIEGLKDALKADGGIP-AGVLLSAVNVY------------GTKAHQATIIEGAAAHAAGL 109
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLC 187
+ L++L + + L+G+LG V+GM+G F ++ G+ E+L+ GL
Sbjct: 110 LKNYLNYLDVIVTLSPLMGLLGTVIGMIGSFDVLSTADGQPFAITGGVAEALVCTATGLF 169
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAI 220
V+I + IAY + + +E ++ + AI
Sbjct: 170 VAIIALIAYTYLSQQVSHYISSIEKLSSVYLAI 202
>gi|269798755|ref|YP_003312655.1| MotA/TolQ/ExbB proton channel [Veillonella parvula DSM 2008]
gi|269095384|gb|ACZ25375.1| MotA/TolQ/ExbB proton channel [Veillonella parvula DSM 2008]
Length = 203
Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 39/218 (17%), Positives = 90/218 (41%), Gaps = 20/218 (9%)
Query: 14 FALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ-SLETV 72
+ LF+ G ++ L + I++ ++ +++ + L+ + + + +++
Sbjct: 5 WELFLHGGF----VMWPLLVALIIAVAIAVERVAYYQRLKHEMFALNDALEESEINWQSL 60
Query: 73 CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKL 132
+L++ H ++ + G + + M+ +A + L
Sbjct: 61 LTTLESKHTANIS---------YNLPLVLGQCQDRNV---LQSKMEDMVAHVYTHASRGL 108
Query: 133 SFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPS 192
+L ++ + L+G+LG V GM+G FQ + G+ E+LI+ GLCV+I +
Sbjct: 109 DWLSTIVTMAPLLGLLGTVTGMIGAFQVFGADGAVPTAITGGVGEALIATASGLCVAIVA 168
Query: 193 SIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
+ F + ++E + FS IL G+ +
Sbjct: 169 LCFHAAFTHHVRMTIARLE---DSFSRILDSYDRGHAA 203
>gi|209573878|gb|ACI62877.1| TonB system transport protein ExbB1 [Acidithiobacillus thiooxidans]
Length = 215
Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 38/198 (19%), Positives = 73/198 (36%), Gaps = 6/198 (3%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL--ETVCKSLKNHHNIG 83
++ +L I ++ SVII ++ + R+ + L E + + +
Sbjct: 15 GVLYVLAILFLIELSVIIDRAWFMRSALRKGKTIIHQLSEVGKLTSEKLEELMHEAKGQP 74
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
I +A G+ + D +D AI + ++L L + +
Sbjct: 75 EEQIITAAYRHMDLVHHYGS----ARGEAFDNRLDEAIFLTTPFLDKRLWILDTTVTLAP 130
Query: 144 LVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDS 203
L+G+ G +LGM F +A G+ ++LI+ GL +++ I +N F
Sbjct: 131 LLGLFGTILGMFHAFSILAAPGHAPTQVTGGVADALIATASGLFIAMVGLITFNAFNNAI 190
Query: 204 KKFAMQMEGFANEFSAIL 221
K Q+E L
Sbjct: 191 DKTIQQLESIKLLLINRL 208
>gi|317407684|gb|EFV87619.1| biopolymer transporter [Achromobacter xylosoxidans C54]
Length = 208
Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 33/214 (15%), Positives = 79/214 (36%), Gaps = 21/214 (9%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITL----RRQFREFEQLFWSGQS 68
+ ++ + G I L S+L ++I ++ ++ R + ++ + Q
Sbjct: 4 LLSILREAGWP----IWPLLATSVLGLALIFERFLSLRRSQVMPRGLNEQVAEMLRNRQD 59
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
L+ N L + M + + +++ ++
Sbjct: 60 SPDALNRLE--RNSPLGRVLAEVMRHRHLPR-----------EELRSVVEDTGRAVAHDL 106
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCV 188
+ + +G+++ L+G+ G V+GM+ F S + GI +L + G+ +
Sbjct: 107 SRYIPAIGTIAVVAPLMGLFGTVVGMIEIFGSYTPEGGDPAQLARGISIALYNTGFGILI 166
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
+IP+ IA+ + + ME A + +S
Sbjct: 167 AIPAMIAHRYLRGRVEGYLNTMEIAAARLARAVS 200
>gi|261856318|ref|YP_003263601.1| MotA/TolQ/ExbB proton channel [Halothiobacillus neapolitanus c2]
gi|261836787|gb|ACX96554.1| MotA/TolQ/ExbB proton channel [Halothiobacillus neapolitanus c2]
Length = 207
Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 35/199 (17%), Positives = 79/199 (39%), Gaps = 14/199 (7%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAI 87
+ + + SI++ ++I ++ R + S K L + LA +
Sbjct: 12 MIPIILASIIALAIIFERLWALRHSRLMGGDPVGTVESWI----ASKQLTQNKVSELARM 67
Query: 88 FMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGI 147
+ +G + + ++ A ++ L+ LG+++ L+G+
Sbjct: 68 SPLGV------VLASGLQDVGSAEAMRNRIEDAGRHVAHQMERYLNTLGTIAVISPLLGL 121
Query: 148 LGAVLGMMGFFQSIAGYYSNNVV----SIPGIIESLISILLGLCVSIPSSIAYNKFIEDS 203
LG V+G++ FQSI + GI ++L++ G+ V++P+ I + F
Sbjct: 122 LGTVVGIIDVFQSITASGGAAGINPELLAGGISKALVTTAGGIMVAVPAYIFHRYFRGLV 181
Query: 204 KKFAMQMEGFANEFSAILS 222
+ ++ME A ++
Sbjct: 182 DERIIEMEREAIRLVDMIH 200
>gi|153003047|ref|YP_001377372.1| MotA/TolQ/ExbB proton channel [Anaeromyxobacter sp. Fw109-5]
gi|152026620|gb|ABS24388.1| MotA/TolQ/ExbB proton channel [Anaeromyxobacter sp. Fw109-5]
Length = 209
Score = 103 bits (258), Expect = 2e-20, Method: Composition-based stats.
Identities = 37/201 (18%), Positives = 84/201 (41%), Gaps = 14/201 (6%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLA 85
++ LL S+ S V+I++ F++ R + + L +++ +
Sbjct: 16 WVLWLLIALSVASIGVMIERVAFFLSRRAGDVDALRRQLLAGDLAGASAAVEGRRGMEAE 75
Query: 86 AIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLV 145
+ + D + ++ I R + ++L+FLG++ + +
Sbjct: 76 VVRAA------------VAHAAMGPDAVREVVSGTIERSRIDYEQRLAFLGTLGNNAPFI 123
Query: 146 GILGAVLGMMGFFQSIA--GYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDS 203
G+ G VLG++ F ++ + + GI E+L++ +GL V++P+ +AYN F
Sbjct: 124 GLFGTVLGIVRAFFELSRNPGAAGAGTVMAGISEALVATAVGLFVALPAVVAYNLFQRGL 183
Query: 204 KKFAMQMEGFANEFSAILSRQ 224
++ A + + A L +
Sbjct: 184 RRTAQRATALGHAAIAHLEAR 204
>gi|193216030|ref|YP_001997229.1| MotA/TolQ/ExbB proton channel [Chloroherpeton thalassium ATCC
35110]
gi|193089507|gb|ACF14782.1| MotA/TolQ/ExbB proton channel [Chloroherpeton thalassium ATCC
35110]
Length = 250
Score = 103 bits (258), Expect = 2e-20, Method: Composition-based stats.
Identities = 35/179 (19%), Positives = 82/179 (45%), Gaps = 9/179 (5%)
Query: 43 IQKSVNFITLRRQ------FREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWK 96
I++S+ + +E E +G+ +++ + +NH + L+A+ + + ++K
Sbjct: 59 IERSIALKKAEGKGGLTGFIKEIETEIEAGK-IDSAIEMCENHQSS-LSAVIRAGLQKYK 116
Query: 97 KSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMG 156
+ P + + ++ A E+ + L + +++S + G+ G +GM+
Sbjct: 117 SLVKRNINDPEKRMSEMQKSIEEASMMEMPLLERNLVAISTIASIATMFGLFGTTIGMIR 176
Query: 157 FFQSIAGYYSNNVVSIP-GIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFA 214
FQ++A + + V + GI E+L + LG+ I ++YN F +F ++ A
Sbjct: 177 AFQALATGGAPDAVQLSLGISEALYNTALGIFGGISGIVSYNFFTNKIDRFTYMIDEAA 235
>gi|301057326|ref|ZP_07198444.1| transporter, MotA/TolQ/ExbB proton channel family protein [delta
proteobacterium NaphS2]
gi|300448556|gb|EFK12203.1| transporter, MotA/TolQ/ExbB proton channel family protein [delta
proteobacterium NaphS2]
Length = 467
Score = 103 bits (258), Expect = 2e-20, Method: Composition-based stats.
Identities = 36/192 (18%), Positives = 67/192 (34%), Gaps = 18/192 (9%)
Query: 44 QKSVNFITLRRQFREFEQL---FWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCD 100
++ + + + + + +++
Sbjct: 286 ERLFFLGRVSQNTDRLMTRVTKLVDEGDYGEAVLQTETRSGGPTGNVLKAGLAQ------ 339
Query: 101 KGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQS 160
+D I+ + AI +E + L L +++ L+G+LG V GM+ F
Sbjct: 340 -----QGQPRDIIESSLAEAILKETPRLERFLPALKVLAAIAPLLGLLGTVTGMINTFHV 394
Query: 161 IAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
I + + + + GI E+LI+ LGL V+IP + + + A ME A A
Sbjct: 395 ITVHGTGDPRLMAGGISEALITTQLGLAVAIPILVVTALLGRKASRIASDMEEKAMALIA 454
Query: 220 IL---SRQTEGN 228
L R GN
Sbjct: 455 ALLKDQRPPNGN 466
>gi|313891512|ref|ZP_07825125.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Dialister microaerophilus UPII 345-E]
gi|313120089|gb|EFR43268.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Dialister microaerophilus UPII 345-E]
Length = 202
Score = 103 bits (258), Expect = 2e-20, Method: Composition-based stats.
Identities = 34/218 (15%), Positives = 85/218 (38%), Gaps = 18/218 (8%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL- 69
+ I L G+ + L SI ++ I++ + + ++
Sbjct: 1 MYILHLINAGGIM----MYPLIFCSIAVIAIFIERVKYYKKSESNIAHLIKNIEESGNIK 56
Query: 70 -ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
K + A I + ++ ++ + +++++ A + ++
Sbjct: 57 GNKTLKFILEKDGGIPAQIILEGINSTNRASSQ------------EKIIESAAIHAIGKL 104
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCV 188
E +++L + + L+G+LG V+GM+G F ++ G+ E+L+ GL V
Sbjct: 105 KEYITYLDVIVTLSPLMGLLGTVVGMIGSFNVLSVVSGQPFAVTSGVAEALVCTATGLGV 164
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+I + +AY K + +E + + ++ ++E
Sbjct: 165 AIMALLAYTYLTARVNKLILDIEKISTVYLTMIEGESE 202
>gi|159043122|ref|YP_001531916.1| MotA/TolQ/ExbB proton channel [Dinoroseobacter shibae DFL 12]
gi|157910882|gb|ABV92315.1| MotA/TolQ/ExbB proton channel [Dinoroseobacter shibae DFL 12]
Length = 230
Score = 103 bits (258), Expect = 2e-20, Method: Composition-based stats.
Identities = 47/206 (22%), Positives = 87/206 (42%), Gaps = 21/206 (10%)
Query: 17 FMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITL-----RRQFREFEQLFWSGQSLET 71
FM G +I L S+++ +VI+ K F + +R R + W +
Sbjct: 18 FMAQGGPAIWVIAGL---SVITLTVILWKLWRFARIGAWSGQRADRAVQH--WVKGDMGA 72
Query: 72 VCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEK 131
++L + + + + D S G ++ R+ +A+
Sbjct: 73 AHRALSGQQGVRARLVARALA-----ALDDPGLSFEGAKEETYRIAQRELAQS----RAG 123
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGLCVS 189
L L +++ L+G+LG VLGM+ FQ++ AG ++ GI E+L++ G+ V+
Sbjct: 124 LRVLELIATIAPLIGLLGTVLGMIAAFQALQDAGARADPGTLAGGIWEALLTTAAGMAVA 183
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFAN 215
IP+S+A + F + ME A
Sbjct: 184 IPASMALSYFESVVDRIRQDMEDLAT 209
>gi|261415312|ref|YP_003248995.1| MotA/TolQ/ExbB proton channel [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|261371768|gb|ACX74513.1| MotA/TolQ/ExbB proton channel [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|302325673|gb|ADL24874.1| MotA/TolQ/ExbB proton channel family protein [Fibrobacter
succinogenes subsp. succinogenes S85]
Length = 535
Score = 103 bits (258), Expect = 2e-20, Method: Composition-based stats.
Identities = 36/198 (18%), Positives = 80/198 (40%), Gaps = 16/198 (8%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKN---HHNI 82
++ L + +I++ + +++ V R F + E + N
Sbjct: 342 IVMYPLSLVAIIALLLFLERFVMLSYRGHLGRRFTKKM-DALVAEKKYEEAANLCLKKET 400
Query: 83 GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAG 142
LA + + ++ ++ +R + A+ RE ++ ++ L +M +
Sbjct: 401 SLAMVLFAVLN-----------KVNDTRENAERSLQEALLREQPKLERRMGLLAAMGTIA 449
Query: 143 LLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIE 201
L+G+LG V G++ F I +N+ V GI E+L++ +GL ++IP I + E
Sbjct: 450 PLLGLLGTVTGIITLFTVITEVGTNDARVLAGGISEALVTTEMGLVIAIPVMILHGLLSE 509
Query: 202 DSKKFAMQMEGFANEFSA 219
+K ++ +
Sbjct: 510 KIEKITSELYVQSTSLMN 527
>gi|198282784|ref|YP_002219105.1| MotA/TolQ/ExbB proton channel [Acidithiobacillus ferrooxidans ATCC
53993]
gi|218667894|ref|YP_002424981.1| MotA/TolQ/ExbB proton channel family protein [Acidithiobacillus
ferrooxidans ATCC 23270]
gi|198247305|gb|ACH82898.1| MotA/TolQ/ExbB proton channel [Acidithiobacillus ferrooxidans ATCC
53993]
gi|218520107|gb|ACK80693.1| MotA/TolQ/ExbB proton channel family protein [Acidithiobacillus
ferrooxidans ATCC 23270]
Length = 206
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 42/185 (22%), Positives = 76/185 (41%), Gaps = 14/185 (7%)
Query: 45 KSVNFITLRRQFREFEQLFWSGQSLETVCKSLKN--HHNIGLAAIFMSAMSEWKKSCDKG 102
+ R R+ V +++K ++ LA + + A+
Sbjct: 32 RLWVLRRGRIAPRDLAPRVGELVDAGKVQQAVKVLYENDTPLARMMLVAL---------- 81
Query: 103 ARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA 162
+S +D I ++ E+ + L+FLGS++ L+G+LG V G+M F +I
Sbjct: 82 -QSAGQPRDVIKESVEETGRHEVAHLDRYLNFLGSIAGVAPLLGLLGTVFGIMHAFAAIG 140
Query: 163 GYYSNN-VVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+ + GI E+LI+ GL V+IPS + Y F + +E A + +
Sbjct: 141 MVGAGDPKALASGIAEALITTASGLIVAIPSLMFYRYFKGRVDALVLSLEKEALKLVNQI 200
Query: 222 SRQTE 226
+ TE
Sbjct: 201 AAGTE 205
>gi|313203663|ref|YP_004042320.1| outer membrane transport energization protein exbb [Paludibacter
propionicigenes WB4]
gi|312442979|gb|ADQ79335.1| outer membrane transport energization protein ExbB [Paludibacter
propionicigenes WB4]
Length = 273
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 45/215 (20%), Positives = 94/215 (43%), Gaps = 12/215 (5%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITL--RRQFREF 59
NN+ L D ++ + G V I TLL LS +++ + + +F
Sbjct: 51 NNHPL---DGNLLGTVYKGGFIVPIIQTLLLTVLALS----VERFFAIKSAQGKGNLAKF 103
Query: 60 EQLFWSGQSLET--VCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMM 117
Q + + ++ + + + SA+ ++ + + S I + +
Sbjct: 104 VQEIKTALTKGDIAGATAICDKQKGSVGNVVTSALVKYAEVEEDKTLSKEQQILAIQKEV 163
Query: 118 DVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GII 176
+ A A EL +++ L + ++++ G L+G+LG V+GM+ F S+AG + +++ GI
Sbjct: 164 EEATALELPMLSQNLPVIATITTLGTLMGLLGTVIGMIRSFASLAGAGGTDSMALSQGIS 223
Query: 177 ESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
E+LI+ G+ + I+YN F ++
Sbjct: 224 EALINTAFGIATGALAVISYNYFTSKIDSLTFSID 258
>gi|149198901|ref|ZP_01875943.1| transport protein TolQ-like protein [Lentisphaera araneosa
HTCC2155]
gi|149138099|gb|EDM26510.1| transport protein TolQ-like protein [Lentisphaera araneosa
HTCC2155]
Length = 447
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 38/195 (19%), Positives = 82/195 (42%), Gaps = 10/195 (5%)
Query: 31 LFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMS 90
L + + + + K + ++R Q+ + ++ L+ + L +
Sbjct: 262 LLLLGAICILIALYKFIQLFSIRSQYDD--KVIKLITLLKEGKSEEAEEYVSTLKKPIRA 319
Query: 91 AMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGA 150
+SE K D ++ ++ +++ I EL + + L + A L+G+LG
Sbjct: 320 LLSEAIKYKD-------APREDLEELLNETILSELPRLDRLMHILSVSAGAAPLMGLLGT 372
Query: 151 VLGMMGFFQSIAGYYSNNVVSIP-GIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQ 209
V+G++ F+ I Y + + + GI E+L++ +GL V+IP+ I Y +
Sbjct: 373 VMGIIKTFEMIGIYGTADTNQLSLGISEALVTTEVGLVVAIPTLITYALLNRRLRSIVSN 432
Query: 210 MEGFANEFSAILSRQ 224
+E + F L +
Sbjct: 433 LEKASLSFINGLRAE 447
>gi|88802201|ref|ZP_01117728.1| putative biopolymer transport protein [Polaribacter irgensii 23-P]
gi|88781059|gb|EAR12237.1| putative biopolymer transport protein [Polaribacter irgensii 23-P]
Length = 228
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 38/191 (19%), Positives = 74/191 (38%), Gaps = 17/191 (8%)
Query: 40 SVIIQKSVNFITLRRQFREFEQLFW---SGQSLETVCKSLKNHHNIGLAAIFMSAMSEWK 96
+ ++ T + F S L+ +L N A + +S
Sbjct: 50 YIYFERFFAIKTASKIDENFMNQIRDHVSNGRLD-AADALCKSKNTPTARLIGKGISRIG 108
Query: 97 KSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMG 156
K D I+ ++ A E+ ++ + +S L ++S ++G LG V+GM+
Sbjct: 109 KPLDD-----------INTAIETAGKLEVYQLEKNVSVLATISGVAPMIGFLGTVIGMII 157
Query: 157 FFQSIAGYYS--NNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFA 214
IA + + G+ ++ + + GL V I + + YN + + K QME +
Sbjct: 158 AIHEIANAGGQIDIKLLSDGLYTAMTTTVGGLIVGIIAYMTYNHLVVKTDKVVYQMEAKS 217
Query: 215 NEFSAILSRQT 225
EF +L+
Sbjct: 218 VEFLDLLNEPV 228
>gi|332667284|ref|YP_004450072.1| MotA/TolQ/ExbB proton channel [Haliscomenobacter hydrossis DSM
1100]
gi|332336098|gb|AEE53199.1| MotA/TolQ/ExbB proton channel [Haliscomenobacter hydrossis DSM
1100]
Length = 231
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 38/190 (20%), Positives = 74/190 (38%), Gaps = 16/190 (8%)
Query: 40 SVIIQKSVNFITLRRQFREFEQLFW---SGQSLETVCKSLKNHHNIGLAAIFMSAMSEWK 96
+ +++ + R + F ++ +SL + +A + +
Sbjct: 53 YIFVERYLAIKKAGRIDQNFMNNIRMSVQSGNIP-AARSLCQKTDTPVARMVEKGLQRIG 111
Query: 97 KSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMG 156
K ID ++ E+ ++ + L+ L S++ A ++G LG V GM+
Sbjct: 112 KPLRD-----------IDAAIENVGNIEIFKLEKNLANLASIAGAAPMLGFLGTVTGMIL 160
Query: 157 FFQSIAGYYS-NNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFAN 215
F ++ S + GI ++L++ GL V I + I YN + + K QME
Sbjct: 161 AFYQMSTAESITPSLLAGGIYQALLTTAFGLGVGIFALIGYNLLVANIDKIIYQMEQSTV 220
Query: 216 EFSAILSRQT 225
+F L T
Sbjct: 221 DFMDFLQEPT 230
>gi|282892410|ref|ZP_06300760.1| hypothetical protein pah_c253o034 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|281497812|gb|EFB40173.1| hypothetical protein pah_c253o034 [Parachlamydia acanthamoebae str.
Hall's coccus]
Length = 218
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 36/208 (17%), Positives = 90/208 (43%), Gaps = 20/208 (9%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQFREF---EQLFWSGQSLETVCKSLKNHHNI 82
I ++ S++ ++ I++ ++ +F + ++ + ++
Sbjct: 20 LIFIVIACCSLVGVTIFIERLIHLHRSEIDTNQFIIHLRKIIQDGNIVEAIQYCEDTGGT 79
Query: 83 GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAG 142
+A I + +++ + +D+I+ M+++ E+ + + L ++
Sbjct: 80 -IANITKAGLAKHNRD-----------KDQIENAMEISGLIEIAHLEKNAKILSIIAHIA 127
Query: 143 LLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIES----LISILLGLCVSIPSSIAYNK 198
L+G+LG VLG + F + + +S I E+ L++ GL V+IP +AYN
Sbjct: 128 PLIGLLGTVLGFIQAFSEMRMSGLVD-ISATRIGEAMEYALVTTAAGLVVAIPCVLAYNY 186
Query: 199 FIEDSKKFAMQMEGFANEFSAILSRQTE 226
+ + F ++++ + E ++L Q E
Sbjct: 187 IVSRVEGFVLEIQTTSAEIVSLLMDQKE 214
>gi|86607417|ref|YP_476180.1| MotA/TolQ/ExbB family proton transporter [Synechococcus sp.
JA-3-3Ab]
gi|86555959|gb|ABD00917.1| proton transporter, MotA/TolQ/ExbB proton channel family
[Synechococcus sp. JA-3-3Ab]
Length = 238
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 39/207 (18%), Positives = 88/207 (42%), Gaps = 17/207 (8%)
Query: 29 TLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG--QSLETVCKSLKNHHNIGLAA 86
L FS+ S + I++++ + + + E + S ++ L+ + ++ +A
Sbjct: 16 IPLLTFSVFSVACCIERALFWWKVTHRQEEVVRQALSQYRRNPRAAQYLLEQNADLPIAR 75
Query: 87 IFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVG 146
IF++ + + SP + ++ A+A E+ + + ++ + +G
Sbjct: 76 IFLAGL-------ELNEASPEDFK----LALETALAAEVPLLKRFNTVFDTVITVAPFLG 124
Query: 147 ILGAVLGMMGFFQSIA---GYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDS 203
+LG V G++ SI ++ GI E+L S GL V+IP+ + N F
Sbjct: 125 LLGTVTGIIQILSSIQLGDIGGTDTQGVGQGIAEALYSTAFGLIVAIPTLLISNVFRSLY 184
Query: 204 KKFAMQMEGFANEFSAILSRQTEGNIS 230
+ +++ + E +L RQ + +
Sbjct: 185 LRQLSKIQEYGGEL-ELLHRQRQEMQA 210
>gi|83814961|ref|YP_445800.1| MotA/TolQ/ExbB proton channel family protein [Salinibacter ruber
DSM 13855]
gi|83756355|gb|ABC44468.1| MotA/TolQ/ExbB proton channel family protein [Salinibacter ruber
DSM 13855]
Length = 242
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 37/208 (17%), Positives = 78/208 (37%), Gaps = 18/208 (8%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLET----VCKSLKNHHNIG 83
+ + I I+ ++ ++ ++ + F Q L+ +
Sbjct: 33 MWPVLICLIIGLAISFERIISLNRADINTQAFLQRVKEA--LDEGGIPAAEEECASTRGP 90
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
+A++F + + R+ GI D ++ + + E+ + L +L S
Sbjct: 91 VASVFQAGL----------LRADEGI-DAVEEAVVSYGSIEMSFLERGLVWLSLFISVAP 139
Query: 144 LVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIED 202
++G LG V+GM+ F SI + + GI +L++ GL V++ YN +
Sbjct: 140 MLGFLGTVIGMIEAFDSIEQAGDISPRLVAGGIKIALLTTAFGLIVAVILQFFYNYAVSK 199
Query: 203 SKKFAMQMEGFANEFSAILSRQTEGNIS 230
+ +ME + E L G +
Sbjct: 200 IDRLVAEMEDASIELVDALVALERGESA 227
>gi|189468465|ref|ZP_03017250.1| hypothetical protein BACINT_04863 [Bacteroides intestinalis DSM
17393]
gi|189436729|gb|EDV05714.1| hypothetical protein BACINT_04863 [Bacteroides intestinalis DSM
17393]
Length = 270
Score = 102 bits (256), Expect = 3e-20, Method: Composition-based stats.
Identities = 44/220 (20%), Positives = 94/220 (42%), Gaps = 22/220 (10%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVI---IQKSVNFITL--RRQF 56
NN+ L + + G V I TLL +VI I++ + +
Sbjct: 48 NNHPLPG---NFLGTIYKGGFIVPVIQTLLL-------TVIALSIERYIAIGAAFGKGSL 97
Query: 57 REFEQLFWSGQSLETV----CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDR 112
+F + L + L ++ +A + + + ++ + + +
Sbjct: 98 AKFVANIKAA--LAAGDMKKAQELCDNQRGSVANVVNATLKKYAEMENDTTLAKDQKLLA 155
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI 172
I + ++ A A EL + + L +G++++ G L+G+LG V+GM+ F ++A S + +++
Sbjct: 156 IQKELEEATALELPMMEQNLPIIGTITTLGTLMGLLGTVIGMIRSFAALAAGGSADSMAL 215
Query: 173 P-GIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
GI E+LI+ G+ + I+YN + K ++
Sbjct: 216 SQGISEALINTAFGILTGALAVISYNYYTNKIDKLTYSLD 255
>gi|198284027|ref|YP_002220348.1| MotA/TolQ/ExbB proton channel [Acidithiobacillus ferrooxidans ATCC
53993]
gi|218666160|ref|YP_002426671.1| MotA/TolQ/ExbB proton channel family protein [Acidithiobacillus
ferrooxidans ATCC 23270]
gi|198248548|gb|ACH84141.1| MotA/TolQ/ExbB proton channel [Acidithiobacillus ferrooxidans ATCC
53993]
gi|218518373|gb|ACK78959.1| MotA/TolQ/ExbB proton channel family protein [Acidithiobacillus
ferrooxidans ATCC 23270]
Length = 230
Score = 102 bits (256), Expect = 3e-20, Method: Composition-based stats.
Identities = 29/189 (15%), Positives = 77/189 (40%), Gaps = 12/189 (6%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE--TVCKSLKNHHNIG 83
++ +L +++ VI+ + + F + L+ T+ + ++
Sbjct: 15 GVLYILAGLLVVALGVIVDRFWYLRRTILRGSLFVREIAQHGRLDRETLQRLADEAGDLP 74
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
AA+ +A+ S + D + ++ +I ++ +L L ++ +
Sbjct: 75 EAALLKTAV----------IHSGYVLGDPLASRLEESILIMAPQLDRRLWLLDTIITLAP 124
Query: 144 LVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDS 203
L+G+ G ++GM F + G+ ++L++ GL V++ +A+N F
Sbjct: 125 LLGLFGTIIGMFHAFSVLTAPGHAPTAVTGGVADALVATATGLFVAMTGLVAFNAFNNQV 184
Query: 204 KKFAMQMEG 212
++ +Q++
Sbjct: 185 RQILLQLDS 193
>gi|189220458|ref|YP_001941098.1| biopolymer transport protein [Methylacidiphilum infernorum V4]
gi|189187316|gb|ACD84501.1| Biopolymer transport protein [Methylacidiphilum infernorum V4]
Length = 177
Score = 102 bits (256), Expect = 3e-20, Method: Composition-based stats.
Identities = 34/163 (20%), Positives = 67/163 (41%), Gaps = 15/163 (9%)
Query: 77 KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDR--------------IDRMMDVAIA 122
+N A++++ E G ++ I ++ I
Sbjct: 8 ENFPGSPHHAVYIAGCKELVNMSAGSFPPAEGFSEKSLLKIKISEKSLKLIQSAIEREIG 67
Query: 123 RELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV-SIPGIIESLIS 181
+L + E++ L + +S +G+LG V G+M F +A + PG+ SL+S
Sbjct: 68 NQLLLLEEQMILLATAASGAPFIGLLGTVWGVMDAFGELALSGKATLATMAPGVSGSLLS 127
Query: 182 ILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
++GL V+IP+ YN + K + +E F E + + ++
Sbjct: 128 TVMGLVVAIPALFGYNFIVASLKALTIDLENFGTEVLSEIEKR 170
>gi|254446067|ref|ZP_05059543.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Verrucomicrobiae bacterium DG1235]
gi|198260375|gb|EDY84683.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Verrucomicrobiae bacterium DG1235]
Length = 465
Score = 102 bits (256), Expect = 3e-20, Method: Composition-based stats.
Identities = 37/218 (16%), Positives = 90/218 (41%), Gaps = 14/218 (6%)
Query: 6 LAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS 65
LA++D ++ + G+ ++ L ++ + I K +++
Sbjct: 258 LALVDETLIEHIKKGGV----VMIPLLSMFFVAILLSILKLFEIKSVKSP---------K 304
Query: 66 GQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
+L+ + +L + + S + G ++ ++ ++ +
Sbjct: 305 AGTLQRILDALNSGNKQEALEAANSVDGPFGDLLVAGVEHADQEKELLEEVLYERLLAAQ 364
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISILL 184
++ ++F+ ++A L+G+LG V GM+ F++I + + + ++ GI +LI+
Sbjct: 365 PKLERFIAFIALTAAASPLLGLLGTVTGMIDTFKAITVFGTGDPATLSTGISVALITTEY 424
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
GL V+IP +A +K +ME + F L+
Sbjct: 425 GLIVAIPCLLAQALLSRIAKGKLGEMEQASVAFVNGLN 462
>gi|68304967|gb|AAY89978.1| predicted biopolymer transport ExbB-like transmembrane protein
RSc2528 RS01053 [uncultured bacterium BAC13K9BAC]
Length = 208
Score = 102 bits (256), Expect = 3e-20, Method: Composition-based stats.
Identities = 40/208 (19%), Positives = 79/208 (37%), Gaps = 15/208 (7%)
Query: 20 MGLAVKC--IITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQL---FWSGQSLETVCK 74
L VK ++ +L S+ S++I K + + W + E
Sbjct: 4 ASLLVKGGPVVYILLGLSVYVLSIVIYKLHILFKVNFFNSDVTHKSVKMWLNNNKEEAYT 63
Query: 75 SLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDR-IDRMMDVAIARELEEITEKLS 133
+ + + + K + ++ ++R + + LE L
Sbjct: 64 DISKDTHPQKEVVSFTMYHLLKNNINQD-------KERYLREEVSRLSQERLEYYDSNLD 116
Query: 134 FLGSMSSAGLLVGILGAVLGMMGFFQ--SIAGYYSNNVVSIPGIIESLISILLGLCVSIP 191
L ++ L+G+LG V GM+ FQ +AG N GI E+L++ +GL V+IP
Sbjct: 117 TLKVIAMVAPLLGLLGTVFGMIDAFQQMEMAGNNINPSTLSGGIWEALLTTAVGLSVAIP 176
Query: 192 SSIAYNKFIEDSKKFAMQMEGFANEFSA 219
+ + + F ++K + +E +
Sbjct: 177 TVLFESYFRATNEKLKINIEHSVTKLLT 204
>gi|329122129|ref|ZP_08250737.1| MotA/TolQ/ExbB proton channel [Dialister micraerophilus DSM 19965]
gi|327466936|gb|EGF12452.1| MotA/TolQ/ExbB proton channel [Dialister micraerophilus DSM 19965]
Length = 202
Score = 102 bits (256), Expect = 3e-20, Method: Composition-based stats.
Identities = 34/218 (15%), Positives = 86/218 (39%), Gaps = 18/218 (8%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL- 69
+ I L G+ + L SI ++ I++ + + ++
Sbjct: 1 MYILHLINAGGIM----MYPLIFCSIAVIAIFIERVKYYKKSESNIAYLIKNIEESGNIK 56
Query: 70 -ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
K + A I + ++ ++ + +++++ A + ++
Sbjct: 57 GNKTLKFILEKDGGIPAQIILEGINSTNRASSQ------------EKIIEGAAIHAIGKL 104
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCV 188
E +++L + + L+G+LG V+GM+G F ++ G+ E+L+ +GL V
Sbjct: 105 KEYITYLDVIVTLSPLMGLLGTVVGMIGSFNVLSVVSGQPFAVTSGVAEALVCTAIGLGV 164
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+I + +AY K + +E + + ++ ++E
Sbjct: 165 AIMALLAYTYLTARVNKLILDIEKISTVYLTMIEGESE 202
>gi|110834828|ref|YP_693687.1| MotA/TolQ/ExbB proton channel family protein [Alcanivorax
borkumensis SK2]
gi|110647939|emb|CAL17415.1| MotA/TolQ/ExbB proton channel family protein [Alcanivorax
borkumensis SK2]
Length = 223
Score = 102 bits (256), Expect = 3e-20, Method: Composition-based stats.
Identities = 39/193 (20%), Positives = 81/193 (41%), Gaps = 22/193 (11%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLR----RQFREFEQLFWSGQSLETVCKSLKNHHN 81
+ +L + S+++ + I K + F +R RQ + G+ S +
Sbjct: 17 ATMWVLALLSVIALATFISKILQFARIRPGNSRQADQLLSAIRQGKP-----TSKPDKLT 71
Query: 82 IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSA 141
+ + W+ ++ ++ + L+E+ L L +S+
Sbjct: 72 SPIDRVL------WQCWENRNLDEAAWQEESLRLA-----RSGLDELRGGLRVLEVISAI 120
Query: 142 GLLVGILGAVLGMMGFFQS--IAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKF 199
L+G+LG V GM+G FQ+ +AG + + GI E+L++ GL V+IP+ A++
Sbjct: 121 APLLGLLGTVFGMIGAFQALEMAGSQVDPSILSGGIWEALLTTAAGLTVAIPTLAAFHWA 180
Query: 200 IEDSKKFAMQMEG 212
++ +M+
Sbjct: 181 DRSIEQCREKMQD 193
>gi|154493588|ref|ZP_02032908.1| hypothetical protein PARMER_02928 [Parabacteroides merdae ATCC
43184]
gi|154086798|gb|EDN85843.1| hypothetical protein PARMER_02928 [Parabacteroides merdae ATCC
43184]
Length = 236
Score = 102 bits (256), Expect = 3e-20, Method: Composition-based stats.
Identities = 34/190 (17%), Positives = 72/190 (37%), Gaps = 15/190 (7%)
Query: 40 SVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLK--NHHNIGLAAIFMSAMSEWKK 97
+ IQ+ + ++ F V +L N A + ++ +
Sbjct: 57 YIFIQRLMVIRRAGKEDETFMNRIKDYIHEGKVDSALNLCRSTNTPSARMIEKGITRLGR 116
Query: 98 SCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGF 157
+ + ++ E+ ++ + + + ++ ++G LG V GM+
Sbjct: 117 P-----------MNDVLVAIENVGNLEIAKLEKGFPLIATTAAGAPMLGFLGTVTGMVRA 165
Query: 158 FQSIAGYYSNNVVSI--PGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFAN 215
F +A +N V++ GI E+L++ + GL V I + AYN + +ME
Sbjct: 166 FFDMANAGTNVDVTLLSGGIYEALVTTVGGLVVGIITLFAYNYLVSQVDNVVNKMEARTM 225
Query: 216 EFSAILSRQT 225
EF +L+
Sbjct: 226 EFMDLLNEPA 235
>gi|313680196|ref|YP_004057935.1| mota/tolq/exbb proton channel [Oceanithermus profundus DSM 14977]
gi|313152911|gb|ADR36762.1| MotA/TolQ/ExbB proton channel [Oceanithermus profundus DSM 14977]
Length = 206
Score = 102 bits (256), Expect = 3e-20, Method: Composition-based stats.
Identities = 44/194 (22%), Positives = 71/194 (36%), Gaps = 18/194 (9%)
Query: 40 SVIIQKSVNFITLR----RQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEW 95
V ++ + + R RE + GQ V H L ++ +
Sbjct: 23 YVFFERYLALRREKIGGERLMREVDASVRRGQI--DVALEAARAHGGTLGRFMLAGL--- 77
Query: 96 KKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMM 155
AR P G+ +D + A+ E + L L + L+G+LG V GM+
Sbjct: 78 -------ARVPFGVT-AVDAALKAALLEEESRLARGLGVLSVTAQVAPLLGLLGTVSGMI 129
Query: 156 GFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFA 214
F +A + GI E+L + GL V+IP+ IAY+ ++E
Sbjct: 130 RAFNVLASQGQTTAKLLAGGIGEALFTTAAGLIVAIPALIAYHYLAGRVDDILSELEQRR 189
Query: 215 NEFSAILSRQTEGN 228
E IL+ G
Sbjct: 190 EELLGILAEVRNGE 203
>gi|329961711|ref|ZP_08299742.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Bacteroides fluxus YIT 12057]
gi|328531452|gb|EGF58292.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Bacteroides fluxus YIT 12057]
Length = 270
Score = 102 bits (256), Expect = 3e-20, Method: Composition-based stats.
Identities = 44/220 (20%), Positives = 93/220 (42%), Gaps = 22/220 (10%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVI---IQKSVNFITL--RRQF 56
NN+ L + + G V I TLL +VI I++ + +
Sbjct: 48 NNHPLPG---NFLGTIYKGGFIVPVIQTLLL-------TVIALSIERYIAIRAAFGKGSL 97
Query: 57 REFEQLFWSGQSLETV----CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDR 112
+F + + L + + + +A + + + ++ + S
Sbjct: 98 VKFVENIKAA--LAAGDMNKAQQICDAQRGSVANVVNATLKKYAEMESDTTLSKDQKLLA 155
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI 172
I + ++ A A EL + + L +G++++ G L+G+LG V+GM+ F ++A S + +++
Sbjct: 156 IQKELEEATALELPMMEQNLPIIGTITTLGTLMGLLGTVIGMIRSFAALAAGGSADSMAL 215
Query: 173 P-GIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
GI E+LI+ G+ + I+YN + K ++
Sbjct: 216 SQGISEALINTAFGILTGALAVISYNYYTNKIDKLTYSLD 255
>gi|290969017|ref|ZP_06560552.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Megasphaera genomosp. type_1 str. 28L]
gi|290780973|gb|EFD93566.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Megasphaera genomosp. type_1 str. 28L]
Length = 203
Score = 102 bits (256), Expect = 3e-20, Method: Composition-based stats.
Identities = 38/202 (18%), Positives = 77/202 (38%), Gaps = 23/202 (11%)
Query: 14 FALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREF----EQLFWSGQSL 69
LF G+ ++ + + SI + ++ I++ + R+ ++F E GQ
Sbjct: 8 LHLFKSGGV----VMYPMLLLSIFTVAIAIERCFYYRGNRKDSKKFFVGIEHAVKEGQW- 62
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+ ++ I + + + + ++D + V
Sbjct: 63 -EMASQFCEKFPTAISRIIANGL--------QHNENVDDMKDGFAEQLTVEAVGF----R 109
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVS 189
L +L ++ + L+G+LG V GM+G F + + ++ G+ E+LI+ GLCV+
Sbjct: 110 RYLDYLSAIVTISPLLGLLGTVTGMIGTFSVLDNGAGASAITG-GVGEALIATASGLCVA 168
Query: 190 IPSSIAYNKFIEDSKKFAMQME 211
I S Y F E
Sbjct: 169 IVSFCVYTYFDHQLDTIITDTE 190
>gi|225849976|ref|YP_002730210.1| biopolymer transport protein ExbB [Persephonella marina EX-H1]
gi|225644778|gb|ACO02964.1| biopolymer transport protein ExbB [Persephonella marina EX-H1]
Length = 154
Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 26/86 (30%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
+ ++L L + + +G+ G VLG++ F + V V + GI E+L++ +GL
Sbjct: 59 LEKRLGILATFGNNAPFIGLFGTVLGIIKAFHDLGTSTEFGVRVVMQGISEALVATAMGL 118
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEG 212
V+IP+ IAYN F+ K + E
Sbjct: 119 FVAIPAVIAYNYFVRKVKTILLTYEQ 144
>gi|302339690|ref|YP_003804896.1| MotA/TolQ/ExbB proton channel [Spirochaeta smaragdinae DSM 11293]
gi|301636875|gb|ADK82302.1| MotA/TolQ/ExbB proton channel [Spirochaeta smaragdinae DSM 11293]
Length = 205
Score = 102 bits (255), Expect = 4e-20, Method: Composition-based stats.
Identities = 34/189 (17%), Positives = 75/189 (39%), Gaps = 17/189 (8%)
Query: 35 SILSWSVIIQKSVNFITLRRQFREFEQLFWSG---QSLETVCKSLKNHHNIGLAAIFMSA 91
S+L+ +II++ + F ++ + + +N+ +A +
Sbjct: 19 SVLAAVIIIERLLFFRKIKVDEESLINRLKATLGKGHYDEAIDICENNP-SPIANLIKVG 77
Query: 92 MSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAV 151
+ E + + + A E+ ++ L+ LG+++ L+G+LG V
Sbjct: 78 I-EHRDYPTSD----------MKEAITSAANLEIPQLERYLTSLGTIAHISPLLGLLGTV 126
Query: 152 LGMMGFFQSIAGYYS--NNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQ 209
G + F + + + + GI E+L++ G+ VS+P+ YN + ++
Sbjct: 127 TGNIKAFGVLGSSGAVGDPSLLATGISEALLTTAAGIVVSVPAITFYNYLVNRVNHMIIR 186
Query: 210 MEGFANEFS 218
ME NE
Sbjct: 187 MENRVNELI 195
>gi|196228701|ref|ZP_03127567.1| MotA/TolQ/ExbB proton channel [Chthoniobacter flavus Ellin428]
gi|196226982|gb|EDY21486.1| MotA/TolQ/ExbB proton channel [Chthoniobacter flavus Ellin428]
Length = 222
Score = 102 bits (255), Expect = 4e-20, Method: Composition-based stats.
Identities = 34/204 (16%), Positives = 80/204 (39%), Gaps = 17/204 (8%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFW---SGQSLETVCKSLKNHHNIGL 84
+ L+ S+L+ +V +++ F + + EF + + + +
Sbjct: 12 MWLILFCSVLAGAVFLERVTYFHRISIRVGEFMRGLTNLIQDRRFAEAQMECASTP-SPI 70
Query: 85 AAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLL 144
+ +A+ + ++D ++ A E+ + +L L +++ L
Sbjct: 71 TRVIHAAII-------RHQSDRSELKD----IVQEAGQLEMPRLERRLGLLATLAFITPL 119
Query: 145 VGILGAVLGMMGFFQSIAGYY--SNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIED 202
+G+LG V+G++ F ++ ++ GI +SL++ GL V+IP ++ Y+
Sbjct: 120 IGLLGTVVGLIESFVNVTSQSGFASATDISSGIYQSLLTTAGGLVVAIPCAVGYSYLSSR 179
Query: 203 SKKFAMQMEGFANEFSAILSRQTE 226
ME E ++S
Sbjct: 180 VNALMHDMERAGIEIVNLISENRH 203
>gi|225009978|ref|ZP_03700450.1| MotA/TolQ/ExbB proton channel [Flavobacteria bacterium MS024-3C]
gi|225005457|gb|EEG43407.1| MotA/TolQ/ExbB proton channel [Flavobacteria bacterium MS024-3C]
Length = 227
Score = 102 bits (255), Expect = 4e-20, Method: Composition-based stats.
Identities = 37/157 (23%), Positives = 69/157 (43%), Gaps = 13/157 (8%)
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
KSL + +A + + +S K D I+ ++ A E+ ++ +
Sbjct: 82 DAAKSLCAQTDSPVARLTLKGVSRIGKPLDD-----------INTAIENAGTLEVYKLEK 130
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA--GYYSNNVVSIPGIIESLISILLGLCV 188
+S L +++ A ++G LG V+GM+ F +A G + GI ++ + + GL V
Sbjct: 131 NVSVLATVAGAAPMIGFLGTVIGMILAFHEMATSGGQAEMGALASGIYTAMTTTVGGLVV 190
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
I + I YN + + K ME A +F +L+
Sbjct: 191 GIIAYIGYNHLVNMTNKVVHSMEANAVDFLDLLNEPV 227
>gi|160890025|ref|ZP_02071028.1| hypothetical protein BACUNI_02460 [Bacteroides uniformis ATCC 8492]
gi|270294691|ref|ZP_06200893.1| conserved hypothetical protein [Bacteroides sp. D20]
gi|317481335|ref|ZP_07940403.1| MotA/TolQ/ExbB proton channel family protein [Bacteroides sp.
4_1_36]
gi|156860413|gb|EDO53844.1| hypothetical protein BACUNI_02460 [Bacteroides uniformis ATCC 8492]
gi|270276158|gb|EFA22018.1| conserved hypothetical protein [Bacteroides sp. D20]
gi|316902431|gb|EFV24317.1| MotA/TolQ/ExbB proton channel family protein [Bacteroides sp.
4_1_36]
Length = 270
Score = 102 bits (255), Expect = 4e-20, Method: Composition-based stats.
Identities = 44/220 (20%), Positives = 93/220 (42%), Gaps = 22/220 (10%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVI---IQKSVNFITL--RRQF 56
NN+ L + + G V I TLL +VI I++ + +
Sbjct: 48 NNHPLPG---NFLGTIYKGGFIVPVIQTLLL-------TVIALSIERYIAIGAAFGKGSL 97
Query: 57 REFEQLFWSGQSLETV----CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDR 112
+F + L + + + +A + + + ++ + + S
Sbjct: 98 VKFVANIKAA--LAEGDMKKAQQICDSQRGSVANVVNATLKKYAEMENDTELSKDQKLLA 155
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI 172
I + ++ A A EL + + L +G++++ G L+G+LG V+GM+ F ++A S + +++
Sbjct: 156 IQKELEEATALELPMMEQNLPIIGTITTLGTLMGLLGTVIGMIRSFAALAAGGSADSMAL 215
Query: 173 P-GIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
GI E+LI+ G+ + I+YN + K ++
Sbjct: 216 SQGISEALINTAFGILTGALAVISYNYYTNKIDKLTYSLD 255
>gi|149921283|ref|ZP_01909738.1| MotA/TolQ/ExbB proton channel family domain protein [Plesiocystis
pacifica SIR-1]
gi|149817830|gb|EDM77293.1| MotA/TolQ/ExbB proton channel family domain protein [Plesiocystis
pacifica SIR-1]
Length = 229
Score = 102 bits (255), Expect = 4e-20, Method: Composition-based stats.
Identities = 40/219 (18%), Positives = 89/219 (40%), Gaps = 21/219 (9%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS--G 66
MD+ F F + G + + +++ V ++ + + R F +
Sbjct: 1 MDLGYF--FEKGGPL----MWAILGAAVVGLFVFFERMYSLQRSKVVPRAFVDRIRAMVA 54
Query: 67 QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
+ + + L + +A + ++++ + + I ++ RE+
Sbjct: 55 KGKTSEAQLLCEENRSSIARMIVASLQAYADGKTRAE---------IKEAVEEVGGREVA 105
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQ----SIAGYYSNNVVSIPGIIESLISI 182
+ + + +G+++S L+G+LG V+GM+ FQ + A + V GI +LI+
Sbjct: 106 HLDKNVEIIGTVASITPLLGLLGTVVGMIQVFQRFVDAYANGQATPDVFAEGIWTALITT 165
Query: 183 LLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
GL V+IP + Y + + ++ME A +L
Sbjct: 166 AYGLMVAIPMLVLYKFVQGRNDRLIVEMEEDAMGIVDLL 204
>gi|33593724|ref|NP_881368.1| putative biopolymer transport protein [Bordetella pertussis Tohama
I]
gi|33597150|ref|NP_884793.1| putative biopolymer transport protein [Bordetella parapertussis
12822]
gi|33600995|ref|NP_888555.1| putative biopolymer transport protein [Bordetella bronchiseptica
RB50]
gi|33563797|emb|CAE43039.1| putative biopolymer transport protein [Bordetella pertussis Tohama
I]
gi|33566601|emb|CAE37859.1| putative biopolymer transport protein [Bordetella parapertussis]
gi|33575430|emb|CAE32507.1| putative biopolymer transport protein [Bordetella bronchiseptica
RB50]
gi|332383127|gb|AEE67974.1| putative biopolymer transport protein [Bordetella pertussis CS]
Length = 206
Score = 102 bits (254), Expect = 5e-20, Method: Composition-based stats.
Identities = 37/214 (17%), Positives = 82/214 (38%), Gaps = 21/214 (9%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLR----RQFREFEQLFWSGQS 68
+ L + G I L SIL ++I+++ + R + ++ + Q
Sbjct: 1 MLNLLREAGWP----IWPLLATSILGLALIVERLLALRRSRILPRGLNEQVLEMLRNQQD 56
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
L+ + +G ++E + ++ + ++ A E+
Sbjct: 57 TPEALARLERNSPLG------RVLAEVLRQRHLP-------REELRTAVEDAGRGAAYEL 103
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCV 188
+S +G+++ L+G+ G V+GM+ F S A S+ GI +L + G+ +
Sbjct: 104 GRYVSAIGTIAVVAPLMGLFGTVVGMIEIFGSYAPGASDPAQLARGISIALYNTGFGILI 163
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
+IP+ I + + ME A + ++
Sbjct: 164 AIPAMIVHRYLRARIDGYLHAMEQSAGRLARYVA 197
>gi|94499685|ref|ZP_01306222.1| TolR [Oceanobacter sp. RED65]
gi|94428439|gb|EAT13412.1| TolR [Oceanobacter sp. RED65]
Length = 452
Score = 102 bits (254), Expect = 5e-20, Method: Composition-based stats.
Identities = 36/151 (23%), Positives = 69/151 (45%), Gaps = 11/151 (7%)
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+ + + + L + S + K D + ++ +D A+ +EL E+
Sbjct: 306 AQLANTDEVRDDNPLGRVL-SVYQQHKDESD---------LESLEMTLDEAVLKELPELE 355
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-VVSIPGIIESLISILLGLCV 188
LS + +++ L+G+LG V GM+ FQSI + + + + GI ++LI+ +LGL
Sbjct: 356 RGLSLIKLLAAVAPLLGLLGTVTGMIATFQSITLFGTGDPKLMAGGISQALITTVLGLVA 415
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
+IP +N SK+ ++ A A
Sbjct: 416 AIPLLFMHNFLNTRSKEVIQVLDQQAAGLIA 446
>gi|257454984|ref|ZP_05620232.1| MotA/TolQ/ExbB proton channel [Enhydrobacter aerosaccus SK60]
gi|257447694|gb|EEV22689.1| MotA/TolQ/ExbB proton channel [Enhydrobacter aerosaccus SK60]
Length = 221
Score = 102 bits (254), Expect = 5e-20, Method: Composition-based stats.
Identities = 39/210 (18%), Positives = 76/210 (36%), Gaps = 31/210 (14%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+ + + K + +L + S+LSW I + +N + +++
Sbjct: 1 MDFANYWQYTDVVTKTLFFVLIVLSMLSWITGILRILNSQKI-------------AKTVS 47
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
LA + S + ++ + + R +
Sbjct: 48 QDLTQQIYQQQSQLATL-----------------SLDNQKLVTEQQLLQQLNRYRFASEQ 90
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVS 189
L+ LG+ ++ +G+ G V G+ SIA + + G + E+LI LGL V+
Sbjct: 91 GLNILGTTAAIAPFIGLFGTVWGIFHALDSIAKSGQAGLGQVAGPVGEALIMTGLGLAVA 150
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
IP+ I YN + ++K Q A+ A
Sbjct: 151 IPAVIMYNVIVRINRKAMHQANDTAHTLLA 180
>gi|77919106|ref|YP_356921.1| MotA/TolQ/ExbB proton channel family protein [Pelobacter
carbinolicus DSM 2380]
gi|77545189|gb|ABA88751.1| MotA/TolQ/ExbB proton channel family protein [Pelobacter
carbinolicus DSM 2380]
Length = 206
Score = 101 bits (253), Expect = 6e-20, Method: Composition-based stats.
Identities = 43/213 (20%), Positives = 92/213 (43%), Gaps = 18/213 (8%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLET 71
++ +F + G + + + SI++ ++ ++ F + R E + + S
Sbjct: 7 TMLEIFQKGGPL----MYPILLCSIMAMAIFFERLWIFFRVGRGRDELVREVENLVSKLR 62
Query: 72 VCKSL--KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+ +++ + LA I ++A+ ++ D+ I +++ +RE +
Sbjct: 63 IDEAIVVCQRSDTPLARILLAALRAHGRTRDQ-----------IKTVVEETGSRESAPLE 111
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYY-SNNVVSIPGIIESLISILLGLCV 188
L LG++++ L+G+LG VLGM+ F IA GI E+LI+ GL V
Sbjct: 112 RYLGLLGTIATISPLLGLLGTVLGMIRAFTVIATAGMGTPETLGGGISEALITTASGLAV 171
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+IP+ + + ++ME + +L
Sbjct: 172 AIPTILLHKYLTSRLDLMVLKMEESSLRLVDML 204
>gi|256425431|ref|YP_003126084.1| MotA/TolQ/ExbB proton channel [Chitinophaga pinensis DSM 2588]
gi|256040339|gb|ACU63883.1| MotA/TolQ/ExbB proton channel [Chitinophaga pinensis DSM 2588]
Length = 237
Score = 101 bits (253), Expect = 6e-20, Method: Composition-based stats.
Identities = 43/218 (19%), Positives = 88/218 (40%), Gaps = 20/218 (9%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFW---SGQSL 69
+ L + G+ + L I S+++ +++ + + F + S ++
Sbjct: 36 LLDLIAKGGVL----MIPLGILSVIAVFAFVERYLTISKAGKLEDNFMPMIRDHISNGNI 91
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+SL + N +A + DKG + + I++ M+ E+ ++
Sbjct: 92 S-AARSLSKNTNSPIARM-----------IDKGVQRIGKPIESIEKSMENVGKLEIYKME 139
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISILLGLCV 188
+ L L ++ + G LG + GM+ F +I+ + +I GI +I+ GL +
Sbjct: 140 KNLVILSIIAGIAPMFGFLGTIAGMIQTFFNISITSDITLGTIAGGIYVKMITSATGLII 199
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+ + I Y+ K +MEG + EF IL T
Sbjct: 200 GLVAYIGYSFLNAQIDKVINKMEGASAEFIDILQEPTR 237
>gi|289207623|ref|YP_003459689.1| MotA/TolQ/ExbB proton channel [Thioalkalivibrio sp. K90mix]
gi|288943254|gb|ADC70953.1| MotA/TolQ/ExbB proton channel [Thioalkalivibrio sp. K90mix]
Length = 249
Score = 101 bits (253), Expect = 6e-20, Method: Composition-based stats.
Identities = 41/209 (19%), Positives = 85/209 (40%), Gaps = 20/209 (9%)
Query: 17 FMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLR----RQFREFEQLFWSGQSLETV 72
F+ G ++ +L S+++ + ++ K +R R E F G ++
Sbjct: 15 FLDAGGP---VVLILLGASVVALAFVLVKLWQLWRMRVTDVRPADEALNRFHRG-DIQGA 70
Query: 73 CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKL 132
+ + N A++ + GA I ++ + ++ + + L
Sbjct: 71 IQCAEATPNPA-----ARAVARGIRGLQAGASESIVREEVV-----RYGNATIQSLRQGL 120
Query: 133 SFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGLCVSI 190
L + + L+G+LG V+GM+ F+++ AG + V GI E+L++ +GL V+I
Sbjct: 121 RPLEVIGALAPLLGLLGTVMGMIRAFRAMEEAGSQVDPAVLSGGIWEALLTTAVGLAVAI 180
Query: 191 PSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
P A N ++ A +M+
Sbjct: 181 PVVAALNWLETRVERVAHRMDDAVTRLFT 209
>gi|319900972|ref|YP_004160700.1| outer membrane transport energization protein ExbB [Bacteroides
helcogenes P 36-108]
gi|319416003|gb|ADV43114.1| outer membrane transport energization protein ExbB [Bacteroides
helcogenes P 36-108]
Length = 270
Score = 101 bits (253), Expect = 7e-20, Method: Composition-based stats.
Identities = 41/210 (19%), Positives = 90/210 (42%), Gaps = 19/210 (9%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVI---IQKSVNFITL--RRQFREFEQLFWSG 66
+ + G V I TLL +VI I++ + + +F +
Sbjct: 55 NFLGTIYKGGFIVPVIQTLLL-------TVIALSIERYIAIRAAFGKGSLVKFVANIKTA 107
Query: 67 QSLETV----CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIA 122
L + + + +A + + + ++ + + A + I + ++ A A
Sbjct: 108 --LAAGDMKKAQQICDAQRGSVANVVNATLKKYAEMENDPALAKDQKLLAIQKELEEATA 165
Query: 123 RELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLIS 181
EL + + L +G++++ G L+G+LG V+GM+ F ++A S + +++ GI E+LI+
Sbjct: 166 LELPMMEQNLPIIGTITTLGTLMGLLGTVIGMIRSFAALAAGGSADSMALSQGISEALIN 225
Query: 182 ILLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
G+ + I+YN + K ++
Sbjct: 226 TAFGILTGALAVISYNYYTNKIDKLTYSLD 255
>gi|198283045|ref|YP_002219366.1| MotA/TolQ/ExbB proton channel [Acidithiobacillus ferrooxidans ATCC
53993]
gi|218665860|ref|YP_002425256.1| MotA/TolQ/ExbB proton channel family protein [Acidithiobacillus
ferrooxidans ATCC 23270]
gi|198247566|gb|ACH83159.1| MotA/TolQ/ExbB proton channel [Acidithiobacillus ferrooxidans ATCC
53993]
gi|218518073|gb|ACK78659.1| MotA/TolQ/ExbB proton channel family protein [Acidithiobacillus
ferrooxidans ATCC 23270]
Length = 234
Score = 101 bits (253), Expect = 7e-20, Method: Composition-based stats.
Identities = 32/198 (16%), Positives = 76/198 (38%), Gaps = 6/198 (3%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE--TVCKSLKNHHNIG 83
++ +L ++ +VI ++ + ++ + L + + +
Sbjct: 16 GVLYILMFLLVVELAVIFDRAWYLRNAISRGKKILWGISARGKLRRPDLEDLVVLSKGLP 75
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
++ A+ + G+ +R +D AI + ++L L ++ +
Sbjct: 76 EESLLGVALRHFNLIHHYGSARGEAFANR----LDEAIFLTTPSLDKRLWILDTIVTLAP 131
Query: 144 LVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDS 203
L+G+ G +LGM F +A N G+ ++LI+ GL +++ +++N F
Sbjct: 132 LLGLFGTILGMFHAFSILAAPGHNPASVTGGVADALIATASGLFIAMIGLLSFNAFNNAI 191
Query: 204 KKFAMQMEGFANEFSAIL 221
+K Q+E L
Sbjct: 192 EKTIFQLESLKVVLMNRL 209
>gi|226943592|ref|YP_002798665.1| MotA/TolQ/ExbB proton channel [Azotobacter vinelandii DJ]
gi|226718519|gb|ACO77690.1| MotA/TolQ/ExbB proton channel [Azotobacter vinelandii DJ]
Length = 200
Score = 101 bits (253), Expect = 7e-20, Method: Composition-based stats.
Identities = 43/202 (21%), Positives = 82/202 (40%), Gaps = 14/202 (6%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVC-KSLKN-HHNIGLA 85
+ + + SI++ ++II++ + R W + + LK L
Sbjct: 2 MLPIVLCSIVALAIIIERLWSLRPGRVTPPNLLGQVWRWIQDKQLNGDKLKELRAGSPLG 61
Query: 86 AIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLV 145
I + ++ K + + ++ A AR + ++ L+ LG+++ L+
Sbjct: 62 QILAAGLANSKHGR-----------EVMKECIEEAAARVIHDLERYLNALGTIAGIAPLL 110
Query: 146 GILGAVLGMMGFFQSIAGYY-SNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSK 204
G+LG VLGM+ F S G +N GI +LI+ GL V+IP+ +
Sbjct: 111 GLLGTVLGMIEIFSSFMGSGMANASQLAGGISTALITTAAGLFVAIPALFFHRYLQRRVD 170
Query: 205 KFAMQMEGFANEFSAILSRQTE 226
+ + ME A + +L E
Sbjct: 171 ELVVGMEQEAIKLVEVLQGDRE 192
>gi|260881417|ref|ZP_05893427.1| MotA/TolQ/ExbB proton channel family protein [Mitsuokella multacida
DSM 20544]
gi|260848894|gb|EEX68901.1| MotA/TolQ/ExbB proton channel family protein [Mitsuokella multacida
DSM 20544]
Length = 213
Score = 101 bits (253), Expect = 7e-20, Method: Composition-based stats.
Identities = 38/190 (20%), Positives = 81/190 (42%), Gaps = 16/190 (8%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITL---RRQFREFEQLFWSGQSLETVCKSLKNHHNI 82
++ +L + S+ S+ I++++ F + R R+F +G+ + L +
Sbjct: 16 IVMYVLLLCSLFVLSIGIERALYFRRMDSGRAFARDFYLALANGK--RQQAEKLADDARG 73
Query: 83 GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAG 142
LA I + +++ ++ A M+V L ++ ++L +L + +
Sbjct: 74 ALADILFAVITKKPEARKNPATY-----------MEVQSGIALAKLRKRLYYLSVIVTMA 122
Query: 143 LLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIED 202
L+G+LG + GM+ F G+ E+LI+ +GLCV+I + + F +
Sbjct: 123 PLLGLLGTISGMITSFSVFNLESGQATAITGGVGEALIATAMGLCVAIIALTVHAYFSQR 182
Query: 203 SKKFAMQMEG 212
+ ME
Sbjct: 183 IENIVTDMEQ 192
>gi|256822595|ref|YP_003146558.1| MotA/TolQ/ExbB proton channel [Kangiella koreensis DSM 16069]
gi|256796134|gb|ACV26790.1| MotA/TolQ/ExbB proton channel [Kangiella koreensis DSM 16069]
Length = 217
Score = 101 bits (252), Expect = 8e-20, Method: Composition-based stats.
Identities = 44/219 (20%), Positives = 91/219 (41%), Gaps = 22/219 (10%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFW----SGQS 68
+F L G + + + S+++ +I+++ + R + W +GQ
Sbjct: 11 LFDLLKTGGW----TMVPITLCSLIAMGIIVERFWSLQRSRILPKHLVAQVWTWIKNGQF 66
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+T + LKN +G + + + + + ++ A + +
Sbjct: 67 DKTKMRDLKNSSVLG--EVLTAGLLNHQHGRAA-----------MKASINEAGRAVVVRL 113
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVS-IPGIIESLISILLGLC 187
L+ LGS++ L+G+LG V+GM+ F I N + GI E+LI+ G+
Sbjct: 114 ERFLNTLGSIALVTPLLGLLGTVIGMIRVFTVIRVEGVGNADALAGGISEALITTAAGMA 173
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
V+IP+ + + F ++ +ME A + +L + E
Sbjct: 174 VAIPTLVMHRHFSRRVEELVSEMEQEALKMVDVLHGERE 212
>gi|59713962|ref|YP_206737.1| TolQ protein [Vibrio fischeri ES114]
gi|59482210|gb|AAW87849.1| TolQ protein [Vibrio fischeri ES114]
Length = 450
Score = 101 bits (252), Expect = 8e-20, Method: Composition-based stats.
Identities = 42/219 (19%), Positives = 89/219 (40%), Gaps = 30/219 (13%)
Query: 15 ALF--MQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
+LF +Q G V II L ++ + I + +++Q ++
Sbjct: 254 SLFERLQAGGVVGQIILTLL---VIGLIIAIFRGSKLALVQQQIKKQL------------ 298
Query: 73 CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKL 132
K+ + + L I E ++ + ++ + AI E + + + L
Sbjct: 299 -KTPETPTDNPLGRILSVYDEEKHRNV-----------ESLELRLLEAIVDEQQGLEKGL 346
Query: 133 SFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-VVSIPGIIESLISILLGLCVSIP 191
S L +++ ++G+LG V GM+ FQ I + + + V GI +L++ +LGL ++P
Sbjct: 347 SMLKLLAALAPMLGLLGTVTGMIETFQVITQFGNGDPKVMAGGISMALVTTVLGLVAAMP 406
Query: 192 SSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
A+N ++ +E AI + + + +
Sbjct: 407 LLFAHNILSTQAENVRSILEKQGIGLVAIQAEKQQAKST 445
>gi|218129044|ref|ZP_03457848.1| hypothetical protein BACEGG_00617 [Bacteroides eggerthii DSM 20697]
gi|317474828|ref|ZP_07934098.1| MotA/TolQ/ExbB proton channel family protein [Bacteroides eggerthii
1_2_48FAA]
gi|217988679|gb|EEC54998.1| hypothetical protein BACEGG_00617 [Bacteroides eggerthii DSM 20697]
gi|316908966|gb|EFV30650.1| MotA/TolQ/ExbB proton channel family protein [Bacteroides eggerthii
1_2_48FAA]
Length = 270
Score = 101 bits (252), Expect = 8e-20, Method: Composition-based stats.
Identities = 43/220 (19%), Positives = 92/220 (41%), Gaps = 22/220 (10%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVI---IQKSVNFITL--RRQF 56
NN+ L + + G V I TLL +VI I++ + +
Sbjct: 48 NNHPLPG---NFLGTIYKGGFIVPVIQTLLL-------TVIALSIERYIAIRAAFGKGSL 97
Query: 57 REFEQLFWSGQSLETV----CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDR 112
F + L + + + +A + + + ++ + + +
Sbjct: 98 VRFVANIKAA--LAAGDMRKAQEICDTQRGSVANVVNATLRKYAEMERETELTKDQKLLA 155
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI 172
I + ++ A A EL + + L +G++++ G L+G+LG V+GM+ F ++A S + +++
Sbjct: 156 IQKELEEATALELPMMEQNLPIIGTITTLGTLMGLLGTVIGMIRSFAALAAGGSADSMAL 215
Query: 173 P-GIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
GI E+LI+ G+ + I+YN + K ++
Sbjct: 216 SQGISEALINTAFGILTGALAVISYNYYTNKIDKLTYSLD 255
>gi|109898595|ref|YP_661850.1| MotA/TolQ/ExbB proton channel [Pseudoalteromonas atlantica T6c]
gi|109700876|gb|ABG40796.1| outer membrane transport energization protein ExbB
[Pseudoalteromonas atlantica T6c]
Length = 233
Score = 101 bits (252), Expect = 8e-20, Method: Composition-based stats.
Identities = 49/203 (24%), Positives = 93/203 (45%), Gaps = 14/203 (6%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLR-RQFREFEQLFWSGQSLET 71
+ L + G+ V LL S+++ SV + K+ F + R + EQ F L+
Sbjct: 1 MIDLLVNGGVVV----WLLISLSVVALSVGVFKAWQFYSTRPKPADAIEQAF---GFLQQ 53
Query: 72 VCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEK 131
+ G + +S + DK + + I+D I R +AIA ++
Sbjct: 54 GKHAQALLLVNGQRNYRAALISSTVQLIDKSSLALDDIKDEIYRQAQLAIA----QLNSY 109
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGLCVS 189
L L +++ L+G+ G V+GM+ F+++ AG N V GI ++L++ +GL V+
Sbjct: 110 LRVLEVIATLAPLMGLFGTVIGMIEAFKAMESAGAQVNPAVLSGGIWQALLTTAVGLAVA 169
Query: 190 IPSSIAYNKFIEDSKKFAMQMEG 212
IP S+ + F ++ + ++
Sbjct: 170 IPVSMLNSYFERKAEVESQAIQN 192
>gi|262275429|ref|ZP_06053239.1| MotA/TolQ/ExbB proton channel family protein [Grimontia hollisae
CIP 101886]
gi|262220674|gb|EEY71989.1| MotA/TolQ/ExbB proton channel family protein [Grimontia hollisae
CIP 101886]
Length = 448
Score = 101 bits (252), Expect = 8e-20, Method: Composition-based stats.
Identities = 42/204 (20%), Positives = 79/204 (38%), Gaps = 29/204 (14%)
Query: 17 FMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSL 76
F Q G+ K I LL + + + + ++ R ++ K+
Sbjct: 257 FEQGGIVGKIIAVLLA----VGLLIALVRGISMFRAR-------------MAINKQIKTP 299
Query: 77 KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLG 136
N L I +E +S D ++ + AI E + + LS L
Sbjct: 300 TQPGNNPLGRILNVYANEPDRSLDT-----------LELRLMEAIMDEQQHFEKGLSMLK 348
Query: 137 SMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-VVSIPGIIESLISILLGLCVSIPSSIA 195
+++ ++G+LG V GM+ FQ I Y + + + GI +L++ ++GL +IP +A
Sbjct: 349 LLAALAPMLGLLGTVTGMIETFQVITQYGNGDPTIMAGGISMALVTTVMGLVAAIPLLLA 408
Query: 196 YNKFIEDSKKFAMQMEGFANEFSA 219
+N + +E A
Sbjct: 409 HNVLSTQADTLRGMLEKVGVSLVA 432
>gi|304312931|ref|YP_003812529.1| MotA/TolQ/ExbB proton channel family protein [gamma proteobacterium
HdN1]
gi|301798664|emb|CBL46896.1| MotA/TolQ/ExbB proton channel family protein [gamma proteobacterium
HdN1]
Length = 206
Score = 101 bits (252), Expect = 8e-20, Method: Composition-based stats.
Identities = 47/225 (20%), Positives = 91/225 (40%), Gaps = 30/225 (13%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFW-------- 64
+F L G+ ++ L + SIL+ ++I+++ + R+ W
Sbjct: 1 MFELLKAGGI----VMWPLLLCSILASAIILERLWMLRHDKIAPRDQLPQIWVWMKNNQM 56
Query: 65 SGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARE 124
L+ + L I + + + + + + A + E
Sbjct: 57 DASHLKQL------RSGSSLGRILATGLINARHGR-----------EIMKEAITEAASHE 99
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYS-NNVVSIPGIIESLISIL 183
L + L+ LGS++S L+G+LG VLGM+ F S+ + + + GI ++L + +
Sbjct: 100 LHRMQRFLNLLGSIASIAPLLGLLGTVLGMVDMFNSLILTGNHSTTLLAAGIAKALYTTV 159
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
GL V+IPS Y F ++ + ME A + +L E +
Sbjct: 160 AGLVVAIPSVFFYRFFNRRIEELLVTMEQEAIKLVDVLHGDREND 204
>gi|15837681|ref|NP_298369.1| hypothetical protein XF1079 [Xylella fastidiosa 9a5c]
gi|28198276|ref|NP_778590.1| biopolymer transport protein [Xylella fastidiosa Temecula1]
gi|71275594|ref|ZP_00651879.1| MotA/TolQ/ExbB proton channel [Xylella fastidiosa Dixon]
gi|71899491|ref|ZP_00681648.1| MotA/TolQ/ExbB proton channel [Xylella fastidiosa Ann-1]
gi|170729598|ref|YP_001775031.1| biopolymer transport protein [Xylella fastidiosa M12]
gi|182680913|ref|YP_001829073.1| MotA/TolQ/ExbB proton channel [Xylella fastidiosa M23]
gi|9106029|gb|AAF83889.1|AE003944_6 conserved hypothetical protein [Xylella fastidiosa 9a5c]
gi|28056346|gb|AAO28239.1| biopolymer transport protein [Xylella fastidiosa Temecula1]
gi|71163485|gb|EAO13202.1| MotA/TolQ/ExbB proton channel [Xylella fastidiosa Dixon]
gi|71730711|gb|EAO32785.1| MotA/TolQ/ExbB proton channel [Xylella fastidiosa Ann-1]
gi|167964391|gb|ACA11401.1| biopolymer transport protein [Xylella fastidiosa M12]
gi|182631023|gb|ACB91799.1| MotA/TolQ/ExbB proton channel [Xylella fastidiosa M23]
gi|307579381|gb|ADN63350.1| biopolymer transport protein [Xylella fastidiosa subsp. fastidiosa
GB514]
Length = 220
Score = 101 bits (252), Expect = 8e-20, Method: Composition-based stats.
Identities = 38/214 (17%), Positives = 85/214 (39%), Gaps = 22/214 (10%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLR----RQFREFEQLFWSGQS 68
+ L G + L + +++ ++++++ RE + G+
Sbjct: 1 MLELVKAGGWP----MLPLLMLGVVALAIVLERLWTLRRNEVLPSGLGREVREWVRRGKL 56
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ +SL+ + + G+++ I ++ + +
Sbjct: 57 DQNHLESLRRNSPL-------------GALLAAALDVKGGVREMIRERIEDTGRHLVHRM 103
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
L+ LG+++SAG L+G+LG V+GM+ F I Y +V GI ++L+ G+
Sbjct: 104 ERFLNALGTIASAGPLLGLLGTVVGMIQMFLGILDYGVGDVNQLAGGIGKALVCTATGMI 163
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
++IP+ I + F + ++ME A +
Sbjct: 164 IAIPALIFHRYFKGRITGYVIEMEQEAMLLLDAI 197
>gi|329957407|ref|ZP_08297882.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Bacteroides clarus YIT 12056]
gi|328522284|gb|EGF49393.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Bacteroides clarus YIT 12056]
Length = 270
Score = 101 bits (252), Expect = 8e-20, Method: Composition-based stats.
Identities = 43/220 (19%), Positives = 93/220 (42%), Gaps = 22/220 (10%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVI---IQKSVNFITL--RRQF 56
NN+ L + + G V I TLL +VI I++ + +
Sbjct: 48 NNHPLPG---NFLGTIYKGGFIVPVIQTLLL-------TVIALSIERYIAIRAAFGKGSL 97
Query: 57 REFEQLFWSGQSLETV----CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDR 112
+F + L + + + +A + + + ++ + + +
Sbjct: 98 VKFVANIKAA--LAAGDMKKAQEICDTQRGSVANVVNATLKKYAEMENDTEMAKDQKLLA 155
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI 172
I + ++ A A EL + + L +G++++ G L+G+LG V+GM+ F ++A S + +++
Sbjct: 156 IQKELEEATALELPMMEQNLPIIGTITTLGTLMGLLGTVIGMIRSFAALAAGGSADSMAL 215
Query: 173 P-GIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
GI E+LI+ G+ + I+YN + K ++
Sbjct: 216 SQGISEALINTAFGILTGALAVISYNYYTNKIDKLTYSLD 255
>gi|95929768|ref|ZP_01312509.1| MotA/TolQ/ExbB proton channel [Desulfuromonas acetoxidans DSM 684]
gi|95134064|gb|EAT15722.1| MotA/TolQ/ExbB proton channel [Desulfuromonas acetoxidans DSM 684]
Length = 473
Score = 101 bits (252), Expect = 8e-20, Method: Composition-based stats.
Identities = 29/113 (25%), Positives = 55/113 (48%), Gaps = 1/113 (0%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
Q+ +D ++ A+ +++ + L + ++ L+G+LG V GM+ FQ I + + +
Sbjct: 345 QEVLDNALEEALMKQMPRFEKFLPTMAMFAAIAPLLGLLGTVTGMISTFQVITVFGTGDP 404
Query: 170 VSI-PGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+ GI E+LI+ +GL V+IP + ++ F ME F L
Sbjct: 405 KMMSGGISEALITTQVGLAVAIPIMLLHHLFERRVDVLIGDMEEKGTAFKITL 457
>gi|285018587|ref|YP_003376298.1| biopolymer transport exbb transmembrane protein [Xanthomonas
albilineans GPE PC73]
gi|283473805|emb|CBA16308.1| probable biopolymer transport exbb transmembrane protein
[Xanthomonas albilineans]
Length = 249
Score = 101 bits (252), Expect = 9e-20, Method: Composition-based stats.
Identities = 31/145 (21%), Positives = 64/145 (44%), Gaps = 12/145 (8%)
Query: 79 HHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSM 138
N L A+ + + +S + + ++ + + L+ LG++
Sbjct: 91 RRNSPLGALLAAGLEVRHRSR-----------EIVRERIEDTGRHVVHRMERFLNTLGTV 139
Query: 139 SSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYN 197
+SAG L+G+LG V+GM+ F I + +V GI ++L+ G+ +++P+ I +
Sbjct: 140 ASAGPLLGLLGTVVGMIQMFLGILDHGVGDVNQLAGGIGKALVCTATGMIIAVPALIFHR 199
Query: 198 KFIEDSKKFAMQMEGFANEFSAILS 222
F + ++ME A + L
Sbjct: 200 HFKSRIAGYIIEMEQEATALTDALE 224
>gi|298376391|ref|ZP_06986346.1| MotA/TolQ/ExbB proton channel family protein [Bacteroides sp.
3_1_19]
gi|298266269|gb|EFI07927.1| MotA/TolQ/ExbB proton channel family protein [Bacteroides sp.
3_1_19]
Length = 236
Score = 101 bits (252), Expect = 9e-20, Method: Composition-based stats.
Identities = 34/190 (17%), Positives = 72/190 (37%), Gaps = 15/190 (7%)
Query: 40 SVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLK--NHHNIGLAAIFMSAMSEWKK 97
+ +Q+ + ++ F V +L N A + ++ +
Sbjct: 57 YIFVQRLIIIRRAGKEDETFMNRIKDYIHEGKVDSALNLCRSTNTPSARMIEKGITRLGR 116
Query: 98 SCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGF 157
+ + ++ E+ ++ + + + ++ ++G LG V GM+
Sbjct: 117 P-----------MNDVLVAIENVGNLEIAKLEKGFPLIATTAAGAPMLGFLGTVTGMVRA 165
Query: 158 FQSIAGYYSNNVVSI--PGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFAN 215
F +A +N VS+ GI E+L++ + GL V I + AYN + +ME
Sbjct: 166 FFDMANAGTNVDVSLLSGGIYEALVTTVGGLVVGIITLFAYNYLVSQVDNVVNKMEARTM 225
Query: 216 EFSAILSRQT 225
EF +L+
Sbjct: 226 EFMDLLNEPA 235
>gi|223039322|ref|ZP_03609611.1| biopolymer transport ExbB protein [Campylobacter rectus RM3267]
gi|222879383|gb|EEF14475.1| biopolymer transport ExbB protein [Campylobacter rectus RM3267]
Length = 209
Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats.
Identities = 40/198 (20%), Positives = 89/198 (44%), Gaps = 7/198 (3%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAI 87
+ +F S+L +V+++K V F+ + ++ LE + +K ++
Sbjct: 12 MWPIFFLSVLGVAVLLEKGVYFLFIEIDATSSFKIKLCNLILEGDYEKIKEFCKRYKNSL 71
Query: 88 FMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGI 147
+A+ + + +++ ID + + A++ +L + ++ LG +SA +G+
Sbjct: 72 AKTALFVAQNLGEGASKTQ------IDYIAEEAVSMQLTSLEKRTWILGLCASASPQLGL 125
Query: 148 LGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFA 207
LG ++GM+ F ++G +V++ GI E+L + GL V+IP I Y +
Sbjct: 126 LGTIVGMIKAFSGLSGGVDAPLVAV-GISEALYTTAFGLIVAIPCVIFYLMISKKIDFIL 184
Query: 208 MQMEGFANEFSAILSRQT 225
+ + F R++
Sbjct: 185 NDLNRIMSLFGRSFERRS 202
>gi|258622911|ref|ZP_05717927.1| biopolymer transport protein ExbB-related protein [Vibrio mimicus
VM573]
gi|258584850|gb|EEW09583.1| biopolymer transport protein ExbB-related protein [Vibrio mimicus
VM573]
Length = 696
Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats.
Identities = 39/195 (20%), Positives = 80/195 (41%), Gaps = 28/195 (14%)
Query: 18 MQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLK 77
+Q G + +I +L ++ + + + V TLR++ + K+
Sbjct: 516 LQAGGVIGNVILVLLGVGLI---IALYRGVVLATLRQKIKAQL-------------KNPD 559
Query: 78 NHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGS 137
N L I E ++S + ++ + A+ E + LS L
Sbjct: 560 QPGNNPLGRILAVYNKEQQRSV-----------EALELRLLEAVVDEQNHLETGLSMLKL 608
Query: 138 MSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-VVSIPGIIESLISILLGLCVSIPSSIAY 196
+++ ++G+LG V GM+ FQ I + + + V GI +L++ + GL +IP +A+
Sbjct: 609 LAALAPMLGLLGTVTGMIETFQVITQFGNGDPKVMAGGISMALVTTVEGLIAAIPLLLAH 668
Query: 197 NKFIEDSKKFAMQME 211
N ++ +E
Sbjct: 669 NILSAQAEAIRNILE 683
>gi|288940616|ref|YP_003442856.1| MotA/TolQ/ExbB proton channel [Allochromatium vinosum DSM 180]
gi|288895988|gb|ADC61824.1| MotA/TolQ/ExbB proton channel [Allochromatium vinosum DSM 180]
Length = 220
Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats.
Identities = 36/199 (18%), Positives = 77/199 (38%), Gaps = 11/199 (5%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLA 85
I+ L+ I L+ +VI++++ + R G +L L GL
Sbjct: 15 GILYLMVILLTLALTVIVERTWVLRRVTR----------HGAALTQALTPLAAQDRNGLT 64
Query: 86 AIFMSAMSEWKKSCDKGARSPIGIQD-RIDRMMDVAIARELEEITEKLSFLGSMSSAGLL 144
++ + + + + D + +D I R + + +L L + + L
Sbjct: 65 SLRETQARHLHGALLETTLAASAEADPDLASRLDEVILRHVPLLDRRLWVLDTTVTLAPL 124
Query: 145 VGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSK 204
+G+LG ++GM FQ +A + G+ E+L++ GL +++ + +N E +
Sbjct: 125 LGLLGTIIGMFHAFQVLAEPGAAPNAVTGGVAEALVATAAGLLIAVIGLVCFNGLNERVR 184
Query: 205 KFAMQMEGFANEFSAILSR 223
Q++ R
Sbjct: 185 LAVHQLDTLKVMLVNRFGR 203
>gi|254442543|ref|ZP_05056019.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Verrucomicrobiae bacterium DG1235]
gi|198256851|gb|EDY81159.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Verrucomicrobiae bacterium DG1235]
Length = 462
Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats.
Identities = 38/194 (19%), Positives = 76/194 (39%), Gaps = 14/194 (7%)
Query: 36 ILSWSVIIQKSVNFITLRRQFREFEQLFW-------SGQSLETVCKSLKNHHNIGLAAIF 88
I W +I + +LF L ++ + ++
Sbjct: 271 IWVWPIIF------FAVMAALLAVYKLFAIYSIKQPGAAHLGSIVRKVRAGEREAALEEA 324
Query: 89 MSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGIL 148
E+ ++ + ++ ++ +M + ++ LS + ++ L+G+L
Sbjct: 325 RKLPWEFGPMIEEAVKCSDQDKELVEEVMYEKMLEAQPKVERFLSVIAVTAAVAPLLGLL 384
Query: 149 GAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFA 207
G V GM+ F+ I + + + S+ GI E+LI+ LGL V+IPS +A+ ++
Sbjct: 385 GTVTGMINTFKMITLFGTGDASSLSGGISEALITTELGLVVAIPSLVAHAMLNRKAQSIM 444
Query: 208 MQMEGFANEFSAIL 221
ME A F L
Sbjct: 445 ANMEKLAVVFVNGL 458
>gi|317152291|ref|YP_004120339.1| MotA/TolQ/ExbB proton channel [Desulfovibrio aespoeensis Aspo-2]
gi|316942542|gb|ADU61593.1| MotA/TolQ/ExbB proton channel [Desulfovibrio aespoeensis Aspo-2]
Length = 475
Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats.
Identities = 44/221 (19%), Positives = 89/221 (40%), Gaps = 17/221 (7%)
Query: 6 LAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS 65
LA + GL V II + + + +++++ + +R S
Sbjct: 255 LARQQTGVLEWLSSGGLLVWPIILV----GVAALILVVERFYSLSRIRGN---------S 301
Query: 66 GQSLETVCKSLKNHHNIGLAAIFMSAMSEWK--KSCDKGARSPIGIQDRIDRMMDVAIAR 123
+++ T+ + + N F S + + + + ++ I+ + +
Sbjct: 302 ARNMTTILEMV-NRGQWKECRRFCQEQSSYPTCRIINHTLQYLGNTREIIENAFQEGLLK 360
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISI 182
EL + L L +++ L+G+LG V GM+ FQ I Y + + + GI E+LI+
Sbjct: 361 ELPMLERFLPTLNVLAAVAPLLGLLGTVTGMINTFQIITVYGTGDPRMMSGGISEALITT 420
Query: 183 LLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
LGL V++P I ++ + ME F+ L +
Sbjct: 421 QLGLAVAVPIMILHHVLERRVDRIVGDMEEKGTGFAVALMK 461
>gi|150008180|ref|YP_001302923.1| putative biopolymer transport protein ExbB [Parabacteroides
distasonis ATCC 8503]
gi|255015133|ref|ZP_05287259.1| putative biopolymer transport protein ExbB [Bacteroides sp. 2_1_7]
gi|256840632|ref|ZP_05546140.1| conserved hypothetical protein [Parabacteroides sp. D13]
gi|262381241|ref|ZP_06074379.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
gi|301309703|ref|ZP_07215642.1| MotA/TolQ/ExbB proton channel family protein [Bacteroides sp. 20_3]
gi|149936604|gb|ABR43301.1| putative biopolymer transport protein ExbB [Parabacteroides
distasonis ATCC 8503]
gi|256737904|gb|EEU51230.1| conserved hypothetical protein [Parabacteroides sp. D13]
gi|262296418|gb|EEY84348.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
gi|300831277|gb|EFK61908.1| MotA/TolQ/ExbB proton channel family protein [Bacteroides sp. 20_3]
Length = 236
Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats.
Identities = 34/190 (17%), Positives = 72/190 (37%), Gaps = 15/190 (7%)
Query: 40 SVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLK--NHHNIGLAAIFMSAMSEWKK 97
+ +Q+ + ++ F V +L N A + ++ +
Sbjct: 57 YIFVQRLIIIRRAGKEDETFMNRIKDYIHEGKVDSALNLCRSTNTPSARMIEKGITRLGR 116
Query: 98 SCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGF 157
+ + ++ E+ ++ + + + ++ ++G LG V GM+
Sbjct: 117 P-----------MNDVLVAIENVGNLEIAKLEKGFPLIATTAAGAPMLGFLGTVTGMVRA 165
Query: 158 FQSIAGYYSNNVVSI--PGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFAN 215
F +A +N VS+ GI E+L++ + GL V I + AYN + +ME
Sbjct: 166 FFDMANAGTNVDVSLLSGGIYEALVTTVGGLVVGIITLFAYNYLVSQVDNVVNKMEARTM 225
Query: 216 EFSAILSRQT 225
EF +L+
Sbjct: 226 EFMDLLNEPA 235
>gi|323140575|ref|ZP_08075500.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Phascolarctobacterium sp. YIT 12067]
gi|322414928|gb|EFY05722.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Phascolarctobacterium sp. YIT 12067]
Length = 213
Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats.
Identities = 44/201 (21%), Positives = 82/201 (40%), Gaps = 14/201 (6%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLA 85
++ L SI ++ I++ + F + F + C+ L+
Sbjct: 24 LVMWPLLFCSIAVIAIAIERFL-FYKAEDSGQVFAAKY---------CELLRADEKEEAL 73
Query: 86 AIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLV 145
+ +A E K A+ G +++ ++ + ++ KL +L + + L+
Sbjct: 74 QLAEAANGECAKIVADAAKITDG-REQQKAFLESQAGIFIAKLKNKLDYLAIIVTMSPLL 132
Query: 146 GILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKK 205
G+LG ++GM+G F + GI E+LI+ GLCV+I S A++ F
Sbjct: 133 GLLGTIVGMIGAFSIFNLESGAPIAITGGIGEALIATATGLCVAILSLCAHSYFAHRMDN 192
Query: 206 FAMQMEGFANEFSAILSRQTE 226
ME FSA+L +T
Sbjct: 193 MITDMEQC---FSALLEAETR 210
>gi|119946950|ref|YP_944630.1| MotA/TolQ/ExbB proton channel [Psychromonas ingrahamii 37]
gi|119865554|gb|ABM05031.1| MotA/TolQ/ExbB proton channel [Psychromonas ingrahamii 37]
Length = 332
Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats.
Identities = 27/109 (24%), Positives = 58/109 (53%), Gaps = 1/109 (0%)
Query: 117 MDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYY-SNNVVSIPGI 175
M+ R++ ++ + L ++ + ++GILG VLG++ F + +N + GI
Sbjct: 113 MESYAERKIHNMSRGQTLLDTVITLAPMLGILGTVLGIIHSFNILGVQGVNNPTEVVAGI 172
Query: 176 IESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
++L+S +GL V++ + + +N F ++ + +EG +EF I +Q
Sbjct: 173 AQALVSTAMGLSVALLALLPFNLFRALLQRLTLHLEGVGSEFYHICHQQ 221
>gi|313893836|ref|ZP_07827402.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Veillonella sp. oral taxon 158 str. F0412]
gi|313441400|gb|EFR59826.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Veillonella sp. oral taxon 158 str. F0412]
Length = 203
Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats.
Identities = 34/202 (16%), Positives = 79/202 (39%), Gaps = 20/202 (9%)
Query: 14 FALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVC 73
LF G+ ++ L +F + + +++ ++ + + R+ L+ +
Sbjct: 5 IHLFHAGGI----VMYPLVLFMLAACTILFERIRMYRNIDRE-------------LQQLS 47
Query: 74 KSLKNHHNIGLAAIFMSAMSEWKKSCDK---GARSPIGIQDRIDRMMDVAIARELEEITE 130
++ N A A+ + K + + ++ + + E +
Sbjct: 48 DNIDAGRNSNSWAALEQAVKNSDDALSKFVSPIVDSVYSVEGLENRLHDVVGYMDERLKR 107
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSI 190
L++L M + L+G+LG V+GM+ F ++ G V G+ E+LI+ GL V+I
Sbjct: 108 GLNWLSMMVTMAPLLGLLGTVVGMIRSFAAVGGDIGAPTVITGGVSEALIATATGLSVAI 167
Query: 191 PSSIAYNKFIEDSKKFAMQMEG 212
+ ++ ++E
Sbjct: 168 VALAFHSWCTSKVNYDIAKLEQ 189
>gi|328947412|ref|YP_004364749.1| MotA/TolQ/ExbB proton channel [Treponema succinifaciens DSM 2489]
gi|328447736|gb|AEB13452.1| MotA/TolQ/ExbB proton channel [Treponema succinifaciens DSM 2489]
Length = 204
Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats.
Identities = 38/206 (18%), Positives = 89/206 (43%), Gaps = 15/206 (7%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV--CKSLKNHHNIG 83
++ + +++ +I+++ F +++++ +F S +S+ +
Sbjct: 10 IVMVPIIACGLVAVFIIVERFHYFFSIKKRDEKFNSDIESCILKNDFKTAESVCVLADTP 69
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
A + SA+ E + ++ +++ I +D+A+ E LS L ++S+
Sbjct: 70 CAKVVKSAV-EHRNFSER------DLKEFIQSKLDLAV----PEFENNLSALNTISNVST 118
Query: 144 LVGILGAVLGMMGFFQSIAGYYS--NNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIE 201
L+G+LG V G + F + + + + I E+L++ + GL V+IP+ I + F
Sbjct: 119 LLGLLGTVTGNIKAFGVLGNGGTMGDPALLAGAIAEALVTTVAGLVVAIPAIIFSSYFNS 178
Query: 202 DSKKFAMQMEGFANEFSAILSRQTEG 227
+ME L+++ E
Sbjct: 179 QVNHSITRMEQTVTSVLFRLTKKGEA 204
>gi|194333404|ref|YP_002015264.1| MotA/TolQ/ExbB proton channel [Prosthecochloris aestuarii DSM 271]
gi|194311222|gb|ACF45617.1| MotA/TolQ/ExbB proton channel [Prosthecochloris aestuarii DSM 271]
Length = 199
Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats.
Identities = 48/209 (22%), Positives = 95/209 (45%), Gaps = 22/209 (10%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRR---QFREFEQLFWSGQSL 69
++ L G + L + SIL + ++++++F R+ L +G+
Sbjct: 1 MWDLLNTGGPM----MYPLLLGSILVATFALERTIHFFRASSGTPAARQIHALIENGRIE 56
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+ L +AA+ + ++ K+ + I + +R E++ +
Sbjct: 57 NALA--LAQQSPGPVAAVLEAGLAHAGKNRKELEEEVILVGNR-----------EIKRLN 103
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA--GYYSNNVVSIPGIIESLISILLGLC 187
+ L + +S LVGILG VLGM+ FQ++A G +N + GI E+L++ GL
Sbjct: 104 QHLDLIELISRTAPLVGILGTVLGMVTAFQNVADAGGSANPAILASGIWEALLTTAAGLS 163
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANE 216
V+IP+ I ++ E ++ + M+ +A E
Sbjct: 164 VAIPAMIVHHLLEEKTQSLSFSMKQYATE 192
>gi|71899426|ref|ZP_00681585.1| MotA/TolQ/ExbB proton channel [Xylella fastidiosa Ann-1]
gi|71730835|gb|EAO32907.1| MotA/TolQ/ExbB proton channel [Xylella fastidiosa Ann-1]
Length = 220
Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 38/214 (17%), Positives = 85/214 (39%), Gaps = 22/214 (10%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLR----RQFREFEQLFWSGQS 68
+ L G + L + +++ ++++++ RE + G+
Sbjct: 1 MLELVKAGGWP----MLPLLMLGVVALAIVLERLWTLRRNEVLPSGLGREVREWVRRGKL 56
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ +SL+ + + G+++ I ++ + +
Sbjct: 57 DQNHLESLRRNSPL-------------GALLAAALDVKGGVREMIRERIEDTGRHLVHRM 103
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
L+ LG+++SAG L+G+LG V+GM+ F I Y +V GI ++L+ G+
Sbjct: 104 ERFLNALGTIASAGPLLGLLGTVVGMIQMFLGILDYGVGDVNQLAGGIGKALVCTATGMI 163
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
++IP+ I + F + ++ME A +
Sbjct: 164 IAIPALIFHRYFKGRIAGYVIEMEQEAMLLLDAI 197
>gi|297182746|gb|ADI18901.1| biopolymer transport proteins [uncultured delta proteobacterium
HF0010_08B07]
Length = 242
Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 35/221 (15%), Positives = 83/221 (37%), Gaps = 11/221 (4%)
Query: 11 ISIFALFMQ-MGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
++I F + L + ++ L+ I + I++ + + + +
Sbjct: 1 MNIIQTFEKFAELGAEWVMWLMLILGFGMIIIAIERLLLLSKTKVDAPDIARK------- 53
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+ L +S ++ G ++++M +ARE +
Sbjct: 54 --LVDFLDRGQAAQAKQSLTDGLSMEQRVLADGLSQYQRGAVYVEQIMLSTLARERQRYN 111
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCV 188
L++ G++ + +G+ G V+G++ F+ + + V P I E+L++ +GL V
Sbjct: 112 RYLNYFGTIGNNTPFIGLFGTVIGIILAFKKLGENPKGGLEVIGPLISEALVATAVGLFV 171
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNI 229
+IP+ + +N F K+ + A L +
Sbjct: 172 AIPAVVIFNWFKSMVKERISNTDFLMRIVLAHLGEARRKEV 212
>gi|296448309|ref|ZP_06890201.1| MotA/TolQ/ExbB proton channel [Methylosinus trichosporium OB3b]
gi|296254186|gb|EFH01321.1| MotA/TolQ/ExbB proton channel [Methylosinus trichosporium OB3b]
Length = 224
Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 36/189 (19%), Positives = 77/189 (40%), Gaps = 12/189 (6%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVC--KSLKNHHNIG 83
I+ ++ + +L+ +V ++S L R+ R + ++ ++
Sbjct: 15 GILYVMPLMLLLALTVSFERSWCLGGLVRRCRAVMARLSALDHIDRAAIGAEIERLREGP 74
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
+A I +A E D+ + ++ AI +E+ I L L ++ +
Sbjct: 75 IARILRAA-REAPNLRDRTL---------LQARIEEAILQEVPAIDRSLWLLDTIVTLAP 124
Query: 144 LVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDS 203
L+G+LG ++GM FQ + S+ G+ E+L++ GL ++I +N
Sbjct: 125 LLGLLGTIIGMFNSFQVLGKPGSSPTDITAGVAEALVATAAGLFIAIVGVFFFNGLQTRV 184
Query: 204 KKFAMQMEG 212
+ Q+E
Sbjct: 185 RLHVHQLET 193
>gi|172036074|ref|YP_001802575.1| putative biopolymer transport protein [Cyanothece sp. ATCC 51142]
gi|171697528|gb|ACB50509.1| putative biopolymer transport protein [Cyanothece sp. ATCC 51142]
Length = 226
Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 37/209 (17%), Positives = 87/209 (41%), Gaps = 24/209 (11%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITL-RRQFREFEQLFWSGQ-SLE 70
I+ LF++ G ++ L S+ + ++ ++++ +I L ++ R + + + L
Sbjct: 4 IYDLFLKGGP----VMWPLLALSVFTITIALERTWFWIRLLSQENRIVHDVLETARYDLL 59
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
K ++ + + ++ + + M+ RE ++ +
Sbjct: 60 EAQKIAQHARFLPIGRFLLA-----------PLQLKKPSPETFRLAMEARGDREFIQMRK 108
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV----SIPGIIESLISILLGL 186
FL ++ + L+G+LG V G++ F ++ N+ + GI E+LI+ G+
Sbjct: 109 GDKFLETVIAVAPLLGLLGTVTGLITTFNNLKIGEGANLAETSQAAAGISEALITTAAGM 168
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFAN 215
V+I + + Y + Q+E FA
Sbjct: 169 IVAIIALLVYRV---SVTLQSGQVEYFAE 194
>gi|291534027|emb|CBL07140.1| Biopolymer transport proteins [Megamonas hypermegale ART12/1]
Length = 238
Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 42/190 (22%), Positives = 82/190 (43%), Gaps = 18/190 (9%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQ---FREFEQLFWSGQSLETVCKSLKNHHNI 82
++ L I S++ + I++ + + ++ +++ + SG++LE + K H
Sbjct: 49 LVMYPLLICSLVIIFIAIERYLFYKSIDSGHLFTKQYCDIL-SGETLEKAFEFAKTHKG- 106
Query: 83 GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAG 142
A I A SP+ +R + M++ + + EKLS+L +++
Sbjct: 107 ACANILTQA-------------SPLPTVERTEAFMEMKGNIVMSRLREKLSYLSVITTLA 153
Query: 143 LLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIED 202
L+G+LG ++GM+ F + GI E+LI+ GLCV+I S ++
Sbjct: 154 PLLGLLGTIVGMITTFSIFNIQAGQPMAITGGIGEALIATASGLCVAILSLCVHSYLSHK 213
Query: 203 SKKFAMQMEG 212
ME
Sbjct: 214 MNNIITNMEQ 223
>gi|262165742|ref|ZP_06033479.1| MotA/TolQ/ExbB proton channel family protein [Vibrio mimicus VM223]
gi|262025458|gb|EEY44126.1| MotA/TolQ/ExbB proton channel family protein [Vibrio mimicus VM223]
Length = 458
Score = 100 bits (250), Expect = 2e-19, Method: Composition-based stats.
Identities = 40/203 (19%), Positives = 81/203 (39%), Gaps = 28/203 (13%)
Query: 18 MQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLK 77
+Q G + +I +L ++ + + + V TLR++ + K+
Sbjct: 263 LQAGGVIGNVILVLLGVGLI---IALYRGVVLATLRQKIKAQL-------------KNPD 306
Query: 78 NHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGS 137
N L I E ++S + ++ + A+ E + LS L
Sbjct: 307 QPGNNPLGRILAVYNKEQQRSV-----------EALELRLLEAVVDEQNHLETGLSMLKL 355
Query: 138 MSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-VVSIPGIIESLISILLGLCVSIPSSIAY 196
+++ ++G+LG V GM+ FQ I + + + V GI +L++ + GL +IP +A+
Sbjct: 356 LAALAPMLGLLGTVTGMIETFQVITQFGNGDPKVMAGGISMALVTTVEGLIAAIPLLLAH 415
Query: 197 NKFIEDSKKFAMQMEGFANEFSA 219
N ++ +E A
Sbjct: 416 NILSAQAEAIRNILEKQGIGLVA 438
>gi|258624585|ref|ZP_05719523.1| biopolymer transport protein ExbB-related protein [Vibrio mimicus
VM603]
gi|258583132|gb|EEW07943.1| biopolymer transport protein ExbB-related protein [Vibrio mimicus
VM603]
Length = 458
Score = 100 bits (250), Expect = 2e-19, Method: Composition-based stats.
Identities = 40/203 (19%), Positives = 81/203 (39%), Gaps = 28/203 (13%)
Query: 18 MQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLK 77
+Q G + +I +L ++ + + + V TLR++ + K+
Sbjct: 263 LQAGGVIGNVILVLLGVGLI---IALYRGVVLATLRQKIKAQL-------------KNPD 306
Query: 78 NHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGS 137
N L I E ++S + ++ + A+ E + LS L
Sbjct: 307 QPGNNPLGRILAVYNKEQQRSV-----------EALELRLLEAVVDEQNHLETGLSMLKL 355
Query: 138 MSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-VVSIPGIIESLISILLGLCVSIPSSIAY 196
+++ ++G+LG V GM+ FQ I + + + V GI +L++ + GL +IP +A+
Sbjct: 356 LAALAPMLGLLGTVTGMIETFQVITQFGNGDPKVMAGGISMALVTTVEGLIAAIPLLLAH 415
Query: 197 NKFIEDSKKFAMQMEGFANEFSA 219
N ++ +E A
Sbjct: 416 NILSAQAEAIRNILEKQGIGLVA 438
>gi|218781363|ref|YP_002432681.1| MotA/TolQ/ExbB proton channel [Desulfatibacillum alkenivorans
AK-01]
gi|218762747|gb|ACL05213.1| MotA/TolQ/ExbB proton channel [Desulfatibacillum alkenivorans
AK-01]
Length = 489
Score = 100 bits (250), Expect = 2e-19, Method: Composition-based stats.
Identities = 38/200 (19%), Positives = 82/200 (41%), Gaps = 16/200 (8%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQL---FWSGQSLETVCKSLKNHHNI 82
+ +LFI + VI ++ + + +R + + ++ N
Sbjct: 288 IVWPILFIAVLACLLVI-ERLIFLLRVRTNVDVLMEKVVTLARQNKWDACMQACTQKGNR 346
Query: 83 GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAG 142
+ + + +S + ++ ++ AI R++ + L LG +++
Sbjct: 347 PVPLVLAAGLSCRGRCRAD-----------MENILGEAILRQIPRLERFLPTLGMLAAIA 395
Query: 143 LLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIE 201
L+G+LG V GM+ F I + + + GI E+L++ +LGL V+IP ++A+
Sbjct: 396 PLLGLLGTVTGMINTFHVITVAGTGDPRLMSGGISEALVTTMLGLAVAIPVTVAHVLLSR 455
Query: 202 DSKKFAMQMEGFANEFSAIL 221
++ QME + L
Sbjct: 456 MVERNVGQMEEKSMALVNEL 475
>gi|258646833|ref|ZP_05734302.1| domain protein, MotA/TolQ/ExbB proton channel family [Dialister
invisus DSM 15470]
gi|260404270|gb|EEW97817.1| domain protein, MotA/TolQ/ExbB proton channel family [Dialister
invisus DSM 15470]
Length = 237
Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats.
Identities = 38/195 (19%), Positives = 78/195 (40%), Gaps = 10/195 (5%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAI 87
+ L + S+ + +++ + + + F LF CK + + A +
Sbjct: 51 MWPLLLCSLAVIFLAVERYMYYRQAISDTK-FVMLF---------CKEMTRGNVSEAAEL 100
Query: 88 FMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGI 147
A K + ++ + R L +++ L +LG + ++G+
Sbjct: 101 AEEAAGSAAKLAKDILSEKDSLGRSLESVTYEKTDRYLNQLSAHLDYLGVIIGLSPMLGL 160
Query: 148 LGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFA 207
LG + GMMG F S+ G N G+ E+LI+ + GL ++I + + KK
Sbjct: 161 LGTITGMMGTFSSMTGQLQNTAGVTAGLAEALITTIFGLVIAITGMLVHAYLNTRYKKAT 220
Query: 208 MQMEGFANEFSAILS 222
+ ++ A+ + LS
Sbjct: 221 LDLDAVADALISGLS 235
>gi|197336703|ref|YP_002158452.1| TolQ protein [Vibrio fischeri MJ11]
gi|197313955|gb|ACH63404.1| TolQ protein [Vibrio fischeri MJ11]
Length = 450
Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats.
Identities = 41/220 (18%), Positives = 88/220 (40%), Gaps = 29/220 (13%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLET 71
S+F G+ + I+ LL I + I + +++Q ++
Sbjct: 254 SLFERLQAGGVVGQIILALLAI----GLIIAIFRGSKLALVQQQIKKQL----------- 298
Query: 72 VCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEK 131
K+ + + L I E ++ + ++ + AI E + + +
Sbjct: 299 --KTPETPTDNPLGRILSVYDEEKHRNV-----------ESLELRLLEAIVDEQQGLEKG 345
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-VVSIPGIIESLISILLGLCVSI 190
LS L +++ ++G+LG V GM+ FQ I + + + V GI +L++ +LGL ++
Sbjct: 346 LSMLKLLAALAPMLGLLGTVTGMIETFQVITQFGNGDPKVMAGGISMALVTTVLGLVAAM 405
Query: 191 PSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
P A+N ++ +E AI + + + +
Sbjct: 406 PLLFAHNILSTQAENVRSILEKQGIGLVAIQAEKQQAKST 445
>gi|46447181|ref|YP_008546.1| putative biopolymer transport protein exbB [Candidatus
Protochlamydia amoebophila UWE25]
gi|46400822|emb|CAF24271.1| putative biopolymer transport protein exbB [Candidatus
Protochlamydia amoebophila UWE25]
Length = 241
Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats.
Identities = 38/195 (19%), Positives = 83/195 (42%), Gaps = 18/195 (9%)
Query: 33 IFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIG--LAAIFMS 90
SILS ++ I++ + +F + ++++ G +A I +
Sbjct: 52 GCSILSVTIFIERLMQIQKSEIDTNQFIISMRKTIKEGNIVEAIQICEKTGGTIATIIKA 111
Query: 91 AMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGA 150
+ + + +++I+ M+++ E+ + L ++ L+G+LG
Sbjct: 112 GLIKHNRD-----------KEQIESAMEISGLVEIARLERNAKILSIIAYIAPLIGLLGT 160
Query: 151 VLGMMGFFQSIAGYYSNNVVSIPGIIES----LISILLGLCVSIPSSIAYNKFIEDSKKF 206
VLG + F + + +S I E+ L++ GL V+IPS IAYN + + F
Sbjct: 161 VLGFIQAFSEMRLSGLVD-ISATRIGEAMEYALVTTAAGLVVAIPSVIAYNYLVSRVEGF 219
Query: 207 AMQMEGFANEFSAIL 221
++++ + E +L
Sbjct: 220 VLEIQTASAEIVDLL 234
>gi|84393272|ref|ZP_00992033.1| biopolymer transport protein ExbB-related protein [Vibrio
splendidus 12B01]
gi|84376097|gb|EAP92984.1| biopolymer transport protein ExbB-related protein [Vibrio
splendidus 12B01]
Length = 458
Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats.
Identities = 37/203 (18%), Positives = 80/203 (39%), Gaps = 28/203 (13%)
Query: 18 MQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLK 77
+Q G V +I L + + + + ++ R++ R K+ +
Sbjct: 263 LQAGGVVGKVILGLLA---IGLIIALVRGISLAIARQKIRAQL-------------KNPE 306
Query: 78 NHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGS 137
+ L + E ++ + ++ + A+ E + + LS L
Sbjct: 307 QAGDNPLGRVLAVYNKEQNQTV-----------EALELRLLEAVVDEQTHLEKGLSMLKL 355
Query: 138 MSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-VVSIPGIIESLISILLGLCVSIPSSIAY 196
+++ ++G+LG V GM+ FQ I + + + V GI +L++ +LGL ++P +A+
Sbjct: 356 LAALAPMLGLLGTVTGMIETFQVITQFGNGDPKVMAGGISMALVTTVLGLVAAMPLLLAH 415
Query: 197 NKFIEDSKKFAMQMEGFANEFSA 219
N S+ +E A
Sbjct: 416 NILSTQSENIRNILEKQGIGLVA 438
>gi|332296238|ref|YP_004438161.1| MotA/TolQ/ExbB proton channel [Thermodesulfobium narugense DSM
14796]
gi|332179341|gb|AEE15030.1| MotA/TolQ/ExbB proton channel [Thermodesulfobium narugense DSM
14796]
Length = 171
Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats.
Identities = 30/91 (32%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILL 184
+ ++L F ++ S +G+ G VLG+M F +A V + + GI E+L S L
Sbjct: 75 SNLNKRLGFFATVGSNAPFIGLFGTVLGIMKAFHDLAFSQDFGVRIVMNGIAEALSSTAL 134
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFAN 215
GL V++P IAYN F+ ++ + E AN
Sbjct: 135 GLFVAVPCVIAYNYFVRKARDLSYIYEEHAN 165
>gi|260886610|ref|ZP_05897873.1| MotA/TolQ/ExbB proton channel family protein [Selenomonas sputigena
ATCC 35185]
gi|330839556|ref|YP_004414136.1| MotA/TolQ/ExbB proton channel [Selenomonas sputigena ATCC 35185]
gi|260863753|gb|EEX78253.1| MotA/TolQ/ExbB proton channel family protein [Selenomonas sputigena
ATCC 35185]
gi|329747320|gb|AEC00677.1| MotA/TolQ/ExbB proton channel [Selenomonas sputigena ATCC 35185]
Length = 204
Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats.
Identities = 36/206 (17%), Positives = 79/206 (38%), Gaps = 19/206 (9%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ-LFWSGQSLE 70
+ LF G ++ L I S+++ ++ +++ F R+ + F ++ + S +
Sbjct: 3 NFIHLFNSGGF----VMYPLLILSLITLAIAVERFYYFRNNRKGSKTFFHGVYHAAASKD 58
Query: 71 -TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
V + L + L+ + M+ K + + ++ E
Sbjct: 59 WDVVRQLCSEFPSALSRVIEQGMAHDKSEAA------------MKSAFEDRMSMESISFH 106
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVS 189
L +L ++ + L+G+LG V GM+ F + ++ + E+L++ GLCV+
Sbjct: 107 RYLDYLSAIVTIAPLLGLLGTVTGMIQTFSVLDNGGGAAAITGG-VGEALVATASGLCVA 165
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFAN 215
I + Y F E +
Sbjct: 166 IIAFCFYTYFDHQLDTLVTDTERLCS 191
>gi|302343722|ref|YP_003808251.1| MotA/TolQ/ExbB proton channel [Desulfarculus baarsii DSM 2075]
gi|301640335|gb|ADK85657.1| MotA/TolQ/ExbB proton channel [Desulfarculus baarsii DSM 2075]
Length = 202
Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats.
Identities = 39/203 (19%), Positives = 78/203 (38%), Gaps = 24/203 (11%)
Query: 14 FALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVC 73
+ + G ++ L S+ W++I+ K++ + R+ L+
Sbjct: 8 WGFILAGGP----VMWPLLAVSVWLWTLILAKALWLWRVGRER----------VDLDLAV 53
Query: 74 KSLKNHHNIGLAA--IFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEK 131
+ L H A + A++ + G + D VA+ + +
Sbjct: 54 ECLLGHAAPPPAKRGLLYDALAMYLDLPSHGGPGDAILWD-------VAVRHQRPRLRRY 106
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV-SIPGIIESLISILLGLCVSI 190
L + + + L+G+LG V GM+ FQ I + + N GI E+LI+ GL V++
Sbjct: 107 LDTILVLVAVAPLLGLLGTVTGMIETFQVICIFGTGNAQSMASGISEALITTQTGLMVAV 166
Query: 191 PSSIAYNKFIEDSKKFAMQMEGF 213
P +A + + ++ F
Sbjct: 167 PGMLAGWALRRAAGRRMNELLAF 189
>gi|311747245|ref|ZP_07721030.1| MotA/TolQ/ExbB proton channel family protein [Algoriphagus sp. PR1]
gi|126578956|gb|EAZ83120.1| MotA/TolQ/ExbB proton channel family protein [Algoriphagus sp. PR1]
Length = 230
Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats.
Identities = 41/201 (20%), Positives = 79/201 (39%), Gaps = 19/201 (9%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRR----QFREFEQLFWSGQSLETVCKSLKNHHNIG 83
+ L++ IL+ + I++ + + + L +G+ K L N
Sbjct: 41 MIPLYLLFILAIFIFIERLLTLKKAAKTPSSMMDQVRMLVQTGKI--EKAKMLCASENTP 98
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
+A + + I+ ++ E+ ++ + L+ L ++S A
Sbjct: 99 VANMIAKGIERI-----------GSPLKNIEVSIENVGKIEIYKLEKNLNLLATVSGAAP 147
Query: 144 LVGILGAVLGMMGFFQSIAGYYS--NNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIE 201
++G LG V GM+ F +IA + + GI E++I+ GL V I + + YN +
Sbjct: 148 MIGFLGTVAGMIQAFIAIAQEEGMVSPKLLSEGIYEAMITTAAGLVVGIVAYLGYNYLVS 207
Query: 202 DSKKFAMQMEGFANEFSAILS 222
K ME EF +L
Sbjct: 208 KVSKLVHNMEYTTVEFIDLLQ 228
>gi|206602410|gb|EDZ38891.1| biopolymer transport protein, ExbB [Leptospirillum sp. Group II
'5-way CG']
Length = 230
Score = 99.9 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 33/203 (16%), Positives = 76/203 (37%), Gaps = 11/203 (5%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+S++ M+ G ++ +L S +S +++I+K + S
Sbjct: 1 MSLWNYLMKGGP----VMYVLLPLSAISLTIMIEKMLFLRKENASSIRLMNTLRDSMSPR 56
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
L+ + + F + D+ + M++ + + E
Sbjct: 57 KELSELQTAFSDSSGSSFFPD-RIFPLLLDRNLSDAQ-----MGSMLETETLLYEKRLKE 110
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSN-NVVSIPGIIESLISILLGLCVS 189
K+ L + + L+G+LG ++G++ F ++ G+ E+LI+ GL ++
Sbjct: 111 KMWILDTTVTMAPLLGLLGTIIGIISSFHVMSVSGLGKPAQITGGVAEALIATATGLVIA 170
Query: 190 IPSSIAYNKFIEDSKKFAMQMEG 212
I S YN ++ + +E
Sbjct: 171 IVSLFFYNFLNAIIREIRVTLES 193
>gi|294339570|emb|CAZ87929.1| putative MotA/TolQ/ExbB proton channel [Thiomonas sp. 3As]
Length = 238
Score = 99.9 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 30/206 (14%), Positives = 78/206 (37%), Gaps = 15/206 (7%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ- 67
M + Q + I+ LL ++ +V +++ + + + + S
Sbjct: 1 MSLDTLTHLAQTSGGILYIMALLLF---VALAVSVERFWAISRMLASAKGWIRELKSHAH 57
Query: 68 -SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
++ + + + + A + A+ D ++ A+ +
Sbjct: 58 VDVKQLKAKVDDDADSPAAQVVAVALQ----------HDLADPLDHFTDRLEEAVMDQAP 107
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGL 186
I L L ++ + L+G+LG ++GM F +++ + G+ E+L++ GL
Sbjct: 108 RIDRGLWMLDTIVTLAPLLGLLGTIIGMFNTFSALSNPGAATQAVTGGVGEALLATAAGL 167
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEG 212
+++ +A+N + + Q+E
Sbjct: 168 FIAVLGLVAFNALNQRVRLVMHQLER 193
>gi|224367130|ref|YP_002601293.1| TolQ2 [Desulfobacterium autotrophicum HRM2]
gi|223689846|gb|ACN13129.1| TolQ2 [Desulfobacterium autotrophicum HRM2]
Length = 192
Score = 99.9 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 36/182 (19%), Positives = 75/182 (41%), Gaps = 15/182 (8%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLA 85
++ L SI+ W++II + + F L R+ + ++ +
Sbjct: 10 IVMIPLVAVSIIMWTLIINRILFFHRLHRKNMS-----------REMAGEFVKNNELPPV 58
Query: 86 AIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLV 145
++ A+S + I +D + + + L+ +G +++ L+
Sbjct: 59 HLYRGAVSLLVTQFLNNRTRKASVDLYI---LDETVMDIITVLERHLALIGVLAAVAPLL 115
Query: 146 GILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSK 204
G+LG V GMM F I+ + + N GI E+L++ GL V+IP + ++ ++
Sbjct: 116 GLLGTVTGMMATFDIISTFGTGNARAMAGGISEALVTTQTGLLVAIPGLYMHGFLVKRAE 175
Query: 205 KF 206
K
Sbjct: 176 KL 177
>gi|171911017|ref|ZP_02926487.1| putative biopolymer transport protein [Verrucomicrobium spinosum
DSM 4136]
Length = 295
Score = 99.9 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 40/201 (19%), Positives = 82/201 (40%), Gaps = 16/201 (7%)
Query: 31 LFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMS 90
+ + S+ + ++I RQ F + ++ +GL A+
Sbjct: 76 MVLLSLFTLALIFFNGFTI----RQNAVVSDAFMNSAD-----ALIRKQDYLGLLAVCNR 126
Query: 91 ----AMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVG 146
K+ D ++P D + + + +R+ I +++S+LG + S ++G
Sbjct: 127 RNECVARVTAKALDFATKNPTASFDEVREVTEAEGSRQASLILQRISYLGDVGSIAPMMG 186
Query: 147 ILGAVLGMMGFFQSIAG---YYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDS 203
+LG V G++ F I+ S V G+ E+L GL + IP+ + Y +
Sbjct: 187 LLGTVFGLITSFNQISHTQFAGSQAVGVATGVYEALFCTAAGLIIGIPALMIYAMLRGKA 246
Query: 204 KKFAMQMEGFANEFSAILSRQ 224
++ ++E + A+LS Q
Sbjct: 247 QRLVSELESASTHLMALLSAQ 267
>gi|225166410|ref|ZP_03728073.1| MotA/TolQ/ExbB proton channel [Opitutaceae bacterium TAV2]
gi|224799348|gb|EEG17912.1| MotA/TolQ/ExbB proton channel [Opitutaceae bacterium TAV2]
Length = 226
Score = 99.9 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 41/222 (18%), Positives = 87/222 (39%), Gaps = 23/222 (10%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFIT--LRRQFREFEQLFWS 65
+M S LF G ++ + + S ++ + ++++++ + RRQ E +
Sbjct: 20 VMGKSPMELFAHGGP----VMWPILLVSFIAVTAVVERAIFLLRENARRQPEVVEAMLEK 75
Query: 66 GQSLE-TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARE 124
++ + +L +A I + A++ S A +E
Sbjct: 76 VEARDAEGAVALGRRSRDYVARILVYALTHRDHSPGN--------------AFTRAANQE 121
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGY--YSNNVVSIPGIIESLISI 182
L + ++ L + + L+G+LG V GMM F ++ +N G+ E+LI+
Sbjct: 122 LSRYQQGIAVLDTCITIAPLLGLLGTVTGMMNTFGALGSGDIAANAGQITGGVGEALIAT 181
Query: 183 LLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
GL ++I + +N ++ + AN IL +
Sbjct: 182 ACGLAIAIVGLLPFNALNTRIEQARHAISDAANALELILKKN 223
>gi|91204007|emb|CAJ71660.1| hypothetical protein kustc0915 [Candidatus Kuenenia
stuttgartiensis]
Length = 489
Score = 99.9 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 34/159 (21%), Positives = 67/159 (42%), Gaps = 1/159 (0%)
Query: 66 GQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
+ + ++ H + K G + I+ +M I
Sbjct: 311 SKDIGVFINAIARHDKNAAMQAAEAIKGPVGKMLSAGVEHVKEKSELIEEVMYETILATR 370
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILL 184
++ L F+ +S+ L+G+LG V G++ F+ I + S +V ++ GI E+LI+
Sbjct: 371 LKLQSLLPFIAISASSAPLLGLLGTVTGIINTFKLITVFGSGDVKTLSGGISEALITTKF 430
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
GL V+IPS + + ++ QM+ A F +++
Sbjct: 431 GLIVAIPSLLLHAFLSRKARSVVDQMQKAAAAFINQVNK 469
>gi|258405774|ref|YP_003198516.1| MotA/TolQ/ExbB proton channel [Desulfohalobium retbaense DSM 5692]
gi|257798001|gb|ACV68938.1| MotA/TolQ/ExbB proton channel [Desulfohalobium retbaense DSM 5692]
Length = 480
Score = 99.9 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 39/218 (17%), Positives = 76/218 (34%), Gaps = 32/218 (14%)
Query: 22 LAVKCIITLLFIFSILSWSVIIQKSVNFITLRR---QFREFEQLFWSGQSLETVCKSLKN 78
LAV + LL + ++ + + L S SL + +
Sbjct: 284 LAVAGVALLLAL----------ERGLALLRLGSPPPALIREIADLASRGSLNEAIRLCQK 333
Query: 79 HHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSM 138
+ + + I+ AI + + L L +
Sbjct: 334 QRGKPACLVLGRILER-----------APAPRQAIEDAQHEAILNLMPRLERFLPTLQVL 382
Query: 139 SSAGLLVGILGAVLGMMGFFQSIAGYYSN-NVVSIPGIIESLISILLGLCVSIPSSIAYN 197
++ L+G+LG V GM+G FQ+I + + + GI E+L++ GL ++IP + ++
Sbjct: 383 AAIAPLLGLLGTVTGMIGTFQTITIFGTGKPEMMAGGISEALLTTQFGLAIAIPLLLVHH 442
Query: 198 KFIEDSKKFAMQMEGFANEFS-------AILSRQTEGN 228
F ++ E AIL+ ++G
Sbjct: 443 LFDRRVERIVADCEETGATLILGLQQGGAILAEDSDGQ 480
>gi|209573954|gb|ACI62915.1| TonB system transport protein ExbB7 [Acidithiobacillus thiooxidans]
Length = 227
Score = 99.9 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 28/201 (13%), Positives = 79/201 (39%), Gaps = 12/201 (5%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE--TVCKSLKNHHNIG 83
++ +L + ++ +V++ + + F Q L+ + ++ ++
Sbjct: 15 GVLYILGLMLLVELAVMVDRFWYLRRTILRGLVFVQELGRHGRLDREALSTLAEDAGDLP 74
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
AA+ +A A S + + ++ ++ ++ +L L ++ +
Sbjct: 75 EAALLRTAA----------AHSGQVKGEALASRLEESVLVIAPKLDRRLWLLDTIITLAP 124
Query: 144 LVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDS 203
L+G+ G ++GM F +A + G+ ++L+S GL +++ + +N F
Sbjct: 125 LLGLFGTIIGMFHAFSVLAQPGHAPMQVTGGVADALVSTASGLFIAMLGLLTFNAFNNQV 184
Query: 204 KKFAMQMEGFANEFSAILSRQ 224
+ +Q++ + Q
Sbjct: 185 RMILLQLDSVKTMLINRMDGQ 205
>gi|95929559|ref|ZP_01312301.1| MotA/TolQ/ExbB proton channel [Desulfuromonas acetoxidans DSM 684]
gi|95134256|gb|EAT15913.1| MotA/TolQ/ExbB proton channel [Desulfuromonas acetoxidans DSM 684]
Length = 204
Score = 99.9 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 46/218 (21%), Positives = 95/218 (43%), Gaps = 20/218 (9%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQ---FREFEQLFWSGQSL 69
+ +F + G + + S+L+ ++ +++ + L +Q R+ +L + +
Sbjct: 1 MLEIFQKGGPL----MYPILFCSVLALAIFLERIWVYRGLIKQSTRLRDEVELLVRNEHI 56
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+ I LA I++ A++ +S D+ I +++ R +
Sbjct: 57 ADALAICRERRTI-LAPIYVVALNAAGRSRDQ-----------IKTLVEEVGERYSVTLD 104
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYY-SNNVVSIPGIIESLISILLGLCV 188
L LG++++ L+G+LG VLGM+ F +A GI E+LI+ GL V
Sbjct: 105 RYLGLLGTIATITPLLGLLGTVLGMIRAFTQLAVQGVGTPATLGGGISEALITTATGLSV 164
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ + + S A Q+E A + +L+ ++
Sbjct: 165 AIPTILLHKYLTSRSDNIAHQLEIHALDLVDLLAHDSK 202
>gi|317061659|ref|ZP_07926144.1| MotA/TolQ/ExbB proton channel family protein [Fusobacterium sp.
D12]
gi|313687335|gb|EFS24170.1| MotA/TolQ/ExbB proton channel family protein [Fusobacterium sp.
D12]
Length = 217
Score = 99.9 bits (248), Expect = 3e-19, Method: Composition-based stats.
Identities = 39/221 (17%), Positives = 85/221 (38%), Gaps = 18/221 (8%)
Query: 6 LAIMDISIF----ALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
+ M++ IF F + G+ + L + SI + S+ +++ + +
Sbjct: 2 IGGMNMGIFEGSVDYFQRGGVF----MWPLLLCSIAAVSIGVERHLYYKKA--------- 48
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
F S + T C + +H + K I R++ ++
Sbjct: 49 -FSSTDFVITFCALMNEYHFEEARKYAEKNTGDAAKLALDTFHMKEDIGKRLESLVYSKA 107
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLIS 181
R ++ + + L +L + ++G+LG + GMM F ++ N + GI E+LI+
Sbjct: 108 ERAIDGMEQHLDYLSVIIGLAPMLGLLGTITGMMSSFNALNERLQNPMAVTAGIGEALIT 167
Query: 182 ILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
+ GLC++I + K ++ + + I+
Sbjct: 168 TVFGLCIAILGMCIHAYLSSKVKTASLNLSEISEVLVDIME 208
>gi|148977293|ref|ZP_01813907.1| biopolymer transport protein ExbB-related protein [Vibrionales
bacterium SWAT-3]
gi|145963406|gb|EDK28670.1| biopolymer transport protein ExbB-related protein [Vibrionales
bacterium SWAT-3]
Length = 458
Score = 99.9 bits (248), Expect = 3e-19, Method: Composition-based stats.
Identities = 37/203 (18%), Positives = 80/203 (39%), Gaps = 28/203 (13%)
Query: 18 MQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLK 77
+Q G V +I L + + + + V+ R++ R K+ +
Sbjct: 263 LQAGGVVGKVILGLLA---IGLIIALVRGVSLAIARQKIRAQL-------------KNPE 306
Query: 78 NHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGS 137
+ L + E ++ + ++ + A+ E + + LS L
Sbjct: 307 QAGDNPLGRVLAVYNKEQNQTV-----------EALELRLLEAVVDEQTHLEKGLSMLKL 355
Query: 138 MSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-VVSIPGIIESLISILLGLCVSIPSSIAY 196
+++ ++G+LG V GM+ FQ I + + + V GI +L++ +LGL ++P +A+
Sbjct: 356 LAALAPMLGLLGTVTGMIETFQVITQFGNGDPKVMAGGISMALVTTVLGLVAAMPLLLAH 415
Query: 197 NKFIEDSKKFAMQMEGFANEFSA 219
N ++ +E A
Sbjct: 416 NILSTQAENIRNILEKQGIGLVA 438
>gi|54302374|ref|YP_132367.1| putative biopolymer transport proteinexbb-related protein
[Photobacterium profundum SS9]
gi|46915796|emb|CAG22567.1| putative biopolymer transport proteinExbB-related protein
[Photobacterium profundum SS9]
Length = 455
Score = 99.5 bits (247), Expect = 3e-19, Method: Composition-based stats.
Identities = 40/202 (19%), Positives = 80/202 (39%), Gaps = 23/202 (11%)
Query: 19 QMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKN 78
G+ K I+ LL I I + + + +R+Q + K +
Sbjct: 266 NGGVVGKVILGLLAIGGI----IALFRGTKLFIIRQQIKGQL-------------KQPQV 308
Query: 79 HHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSM 138
N L + ++ ++G + ++ + I E + + + LS L +
Sbjct: 309 PGNNPLGRVLSVFYDNKERYTEQGRS-----VEALELRLLETIVDEQQHLEKGLSMLKLL 363
Query: 139 SSAGLLVGILGAVLGMMGFFQSIAGYYSNN-VVSIPGIIESLISILLGLCVSIPSSIAYN 197
++ ++G+LG V GM+ FQ I + + + V GI +LI+ +LGL ++P +A+N
Sbjct: 364 AALAPMLGLLGTVTGMIETFQVITQFGNGDPKVMAGGISMALITTVLGLVAAMPLLLAHN 423
Query: 198 KFIEDSKKFAMQMEGFANEFSA 219
+ +E A
Sbjct: 424 ILSTQADTIRNILEKQGISLVA 445
>gi|262402226|ref|ZP_06078787.1| MotA/TolQ/ExbB proton channel family protein [Vibrio sp. RC586]
gi|262351008|gb|EEZ00141.1| MotA/TolQ/ExbB proton channel family protein [Vibrio sp. RC586]
Length = 458
Score = 99.5 bits (247), Expect = 3e-19, Method: Composition-based stats.
Identities = 38/203 (18%), Positives = 81/203 (39%), Gaps = 28/203 (13%)
Query: 18 MQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLK 77
+Q G + +I +L ++ + + + TLR++ + K+ +
Sbjct: 263 LQAGGVIGNVILVLLGVGLI---IALYRGAVLATLRQKIKAQL-------------KNPE 306
Query: 78 NHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGS 137
+ L I E ++S + ++ + A+ E + LS L
Sbjct: 307 QPGDNPLGRILAVYNKEQQRSV-----------EALELRLLEAVVDEQNHLETGLSMLKL 355
Query: 138 MSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-VVSIPGIIESLISILLGLCVSIPSSIAY 196
+++ ++G+LG V GM+ FQ I + + + V GI +L++ + GL +IP +A+
Sbjct: 356 LAALAPMLGLLGTVTGMIETFQVITQFGNGDPKVMAGGISMALVTTVEGLIAAIPLLLAH 415
Query: 197 NKFIEDSKKFAMQMEGFANEFSA 219
N ++ +E A
Sbjct: 416 NILSAQAEAIRNILEKQGIGLVA 438
>gi|262171435|ref|ZP_06039113.1| MotA/TolQ/ExbB proton channel family protein [Vibrio mimicus
MB-451]
gi|261892511|gb|EEY38497.1| MotA/TolQ/ExbB proton channel family protein [Vibrio mimicus
MB-451]
Length = 458
Score = 99.5 bits (247), Expect = 3e-19, Method: Composition-based stats.
Identities = 40/203 (19%), Positives = 81/203 (39%), Gaps = 28/203 (13%)
Query: 18 MQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLK 77
+Q G + +I +L ++ + + + V TLR++ + K+
Sbjct: 263 LQAGGVIGNVILVLLGVGLI---IALYRGVVLATLRQKIKAQL-------------KNPD 306
Query: 78 NHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGS 137
N L I E ++S + ++ + A+ E + LS L
Sbjct: 307 QPGNNPLGRILAVYNKEQQRSV-----------EALELRLLEAVVDEQNHLETGLSMLKL 355
Query: 138 MSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-VVSIPGIIESLISILLGLCVSIPSSIAY 196
+++ ++G+LG V GM+ FQ I + + + V GI +L++ + GL +IP +A+
Sbjct: 356 LAALAPMLGLLGTVTGMIETFQVITQFGNGDPKVMAGGISMALVTTVEGLIAAIPLLLAH 415
Query: 197 NKFIEDSKKFAMQMEGFANEFSA 219
N ++ +E A
Sbjct: 416 NILSAQAEAIRNILEKQGIGLVA 438
>gi|260424852|ref|ZP_05733478.2| MotA/TolQ/ExbB family proton channel protein [Dialister invisus DSM
15470]
gi|260403380|gb|EEW96927.1| MotA/TolQ/ExbB family proton channel protein [Dialister invisus DSM
15470]
Length = 209
Score = 99.5 bits (247), Expect = 3e-19, Method: Composition-based stats.
Identities = 36/204 (17%), Positives = 75/204 (36%), Gaps = 20/204 (9%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS---GQ 67
+ + +F G ++ L + SI + ++I++ + + + F +
Sbjct: 8 MEVIDVFKSGGP----VMYALLLCSICTAVIMIERGMFYHRAGKNLGIFVDNLPDMLLNK 63
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
S N A + + + D + +D A + E
Sbjct: 64 SWNDAYADAAQEDNAA-AFVAQEGIRAAAEGKD------------LRLALDTAYSTAAAE 110
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLC 187
+ L++L + + L+G+LG + GM+ FQ + GI E+LI+ GLC
Sbjct: 111 LRAHLNYLSMIVTLSPLLGLLGTIAGMISSFQIFNLQAGQPMAITGGIGEALIATAAGLC 170
Query: 188 VSIPSSIAYNKFIEDSKKFAMQME 211
V+I + + + F + +E
Sbjct: 171 VAIFALVVHTVFAQKMDDILTVIE 194
>gi|300871889|ref|YP_003786762.1| biopolymer transport protein ExbB [Brachyspira pilosicoli 95/1000]
gi|300689590|gb|ADK32261.1| biopolymer transport protein, ExbB [Brachyspira pilosicoli 95/1000]
Length = 209
Score = 99.5 bits (247), Expect = 3e-19, Method: Composition-based stats.
Identities = 45/200 (22%), Positives = 88/200 (44%), Gaps = 20/200 (10%)
Query: 29 TLLFIFSILSWSVIIQKSVNFITLRRQFREF---EQLFWSGQSLETVCKSLKNHHNIGLA 85
L + S+++ + I+ + + F ++ Q ++T +L N L+
Sbjct: 24 IALLLCSLIAITAIVDRFIYFNKVKAQDDALSPKLHALIKDNDIKTAI-ALCETSNSPLS 82
Query: 86 AIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLV 145
I + + + I M + +EL ++ +S L ++S+ L+
Sbjct: 83 NIVLEGLKN---------------IEIIKESMIMQSNKELPKLERFISTLSTISTVAPLL 127
Query: 146 GILGAVLGMMGFFQSIAGYYSNNVVS-IPGIIESLISILLGLCVSIPSSIAYNKFIEDSK 204
G+LG +LGM+ F +A S N ++ GI +L++ GL ++IP+ + YN F+
Sbjct: 128 GLLGTILGMIQSFGVMASVGSGNPIALASGIANALLTTAAGLVIAIPTVVFYNYFVNALN 187
Query: 205 KFAMQMEGFANEFSAILSRQ 224
ME +NE S LS++
Sbjct: 188 SRISFMENVSNEISDYLSKK 207
>gi|163760175|ref|ZP_02167258.1| MotA/TolQ/ExbB proton channel [Hoeflea phototrophica DFL-43]
gi|162282574|gb|EDQ32862.1| MotA/TolQ/ExbB proton channel [Hoeflea phototrophica DFL-43]
Length = 231
Score = 99.5 bits (247), Expect = 3e-19, Method: Composition-based stats.
Identities = 46/202 (22%), Positives = 84/202 (41%), Gaps = 16/202 (7%)
Query: 27 IITLLFIFSILSWSVIIQKSVNFITL----RRQFREFEQLFWSGQSLETVCKSLKNHHNI 82
++++L + SILS +VI+ K F R + LF SG+ E L
Sbjct: 21 VVSILIVVSILSLAVILLKFFQFARAGIGARSRSERAVALFVSGRVRE--AHDLAALGRN 78
Query: 83 GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAG 142
A I A+ I++R+ R+ L E+ FL S++
Sbjct: 79 PTAVIVAQAIE----LVMAKRLDKQAIEERLTRI----ATTRLHELQSGFRFLDSVAQLA 130
Query: 143 LLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFI 200
L+G+ G VLGM+ F+ + AG + + GI +L++ +GL +++P S+ F
Sbjct: 131 PLMGLFGTVLGMIEAFKDLQSAGDAVDPSLLAGGIWVALLTTAVGLAIAMPVSLILAWFE 190
Query: 201 EDSKKFAMQMEGFANEFSAILS 222
+ + ++ + +S
Sbjct: 191 TRVESERVAVQTLTTDILTGVS 212
>gi|209809662|ref|YP_002265201.1| Biopolymer transport protein TolR [Aliivibrio salmonicida LFI1238]
gi|208011225|emb|CAQ81658.1| Biopolymer transport protein TolR [Aliivibrio salmonicida LFI1238]
Length = 453
Score = 99.5 bits (247), Expect = 3e-19, Method: Composition-based stats.
Identities = 41/214 (19%), Positives = 87/214 (40%), Gaps = 28/214 (13%)
Query: 18 MQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLK 77
+Q G V II L ++ + I + V +++Q + T K+
Sbjct: 259 LQAGGVVGKIILALLTLGLV---IAIFRGVKLAIIQQQIK-------------TQLKNPD 302
Query: 78 NHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGS 137
+ L + E +S + ++ + AI E + + + LS L
Sbjct: 303 APTDNPLGRVLSVYDEEKHRSV-----------ESLELRLLEAIVDEQQGLEKGLSMLKL 351
Query: 138 MSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-VVSIPGIIESLISILLGLCVSIPSSIAY 196
+++ ++G+LG V GM+ FQ I + + + V GI +L++ +LGL ++P A+
Sbjct: 352 LAALAPMLGLLGTVTGMIETFQVITQFGNGDPKVMAGGISMALVTTVLGLVAAMPLLFAH 411
Query: 197 NKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
N ++ +E A+ + + +++
Sbjct: 412 NILSTQAENIRSILEKQGIGLVAMQAEKQPQSVA 445
>gi|51246826|ref|YP_066710.1| transport protein TolQ [Desulfotalea psychrophila LSv54]
gi|50877863|emb|CAG37703.1| related to transport protein TolQ [Desulfotalea psychrophila LSv54]
Length = 463
Score = 99.5 bits (247), Expect = 3e-19, Method: Composition-based stats.
Identities = 38/178 (21%), Positives = 74/178 (41%), Gaps = 2/178 (1%)
Query: 49 FITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMS-EWKKSCDKGARSPI 107
+T+ + + F Q +S + +++ G I + +
Sbjct: 286 LLTVLKAGQLFAQRPLDKKSKAELFARIRDGQIAGAENILLKISRCPAARVLAGSLLFHD 345
Query: 108 GIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSN 167
D +D +M RE+ + LS +G ++S L+G+LG V GM+ FQ+I + +
Sbjct: 346 RGLDTLDNVMQEGYLREIGGLERFLSLVGVLASIAPLLGLLGTVTGMINTFQAITIFGTG 405
Query: 168 NVVSIP-GIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+ + GI E+L++ GL ++IP +A++ +E A+L R
Sbjct: 406 DPRMMSTGISEALVTTQAGLGIAIPLLLAHHFLKRRIAFLVADIEESGTGMMALLGRD 463
>gi|297569525|ref|YP_003690869.1| MotA/TolQ/ExbB proton channel [Desulfurivibrio alkaliphilus AHT2]
gi|296925440|gb|ADH86250.1| MotA/TolQ/ExbB proton channel [Desulfurivibrio alkaliphilus AHT2]
Length = 210
Score = 99.5 bits (247), Expect = 3e-19, Method: Composition-based stats.
Identities = 43/220 (19%), Positives = 85/220 (38%), Gaps = 26/220 (11%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITL-----RRQFREFEQLFWSGQ 67
+ LF G + L S+++ +V+I++ + F L RR+ +
Sbjct: 1 MLQLFHSGGPL----MYPLLACSVIALAVVIERGL-FWALVEYHRRRELVDEVLELSRAG 55
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
LE V + + + + I +S + + D EL+
Sbjct: 56 RLEKVREKVSGCRDY-VVRILISGI--LHRDFSPAKAMEAAAAD------------ELQR 100
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYY-SNNVVSIPGIIESLISILLGL 186
+ + L +M + L+GILG V+G++ F+ + GI ++LI+ GL
Sbjct: 101 MRRFMGVLDTMITVAPLLGILGTVVGIINSFEMLEAAGIEEPGKVTAGIAQALITTATGL 160
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
++I + YN F ++ + +E +A I + E
Sbjct: 161 SIAIFAVFPYNYFNARAENAVLNIEKYATSLEIIFQKTAE 200
>gi|225619481|ref|YP_002720738.1| biopolymer transport protein ExbB [Brachyspira hyodysenteriae WA1]
gi|225214300|gb|ACN83034.1| biopolymer transport protein ExbB [Brachyspira hyodysenteriae WA1]
Length = 210
Score = 99.5 bits (247), Expect = 3e-19, Method: Composition-based stats.
Identities = 48/197 (24%), Positives = 84/197 (42%), Gaps = 20/197 (10%)
Query: 29 TLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS---GQSLETVCKSLKNHHNIGLA 85
L I S+L ++I+ + + F ++ Q S + L+ +L LA
Sbjct: 20 IGLLISSVLGLTIIVDRFIYFTRIKSQDNSLAPKLISLIKDKELKAAI-ALCETSKSPLA 78
Query: 86 AIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLV 145
I MS + D M A +EL + +S L ++S+ L+
Sbjct: 79 NIIMSGLKN---------------IDMPKESMQSASNKELPRLERFISALSTISTVAPLL 123
Query: 146 GILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSK 204
G+LG +LGM+ F I+ S N GI +L++ GL ++IP+ + YN F+
Sbjct: 124 GLLGTILGMIQSFAVISVAGSGNPSALASGIANALLTTAAGLIIAIPTVVFYNYFVNTLN 183
Query: 205 KFAMQMEGFANEFSAIL 221
+ + +E +NE S +
Sbjct: 184 ERILFIENLSNEVSDYI 200
>gi|94264751|ref|ZP_01288530.1| MotA/TolQ/ExbB proton channel [delta proteobacterium MLMS-1]
gi|93454797|gb|EAT05050.1| MotA/TolQ/ExbB proton channel [delta proteobacterium MLMS-1]
Length = 210
Score = 99.5 bits (247), Expect = 3e-19, Method: Composition-based stats.
Identities = 43/219 (19%), Positives = 87/219 (39%), Gaps = 24/219 (10%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITL----RRQFREFEQLFWSGQS 68
+ LF G + L S+++ +V+I+++V + + RR+ +
Sbjct: 1 MLQLFYSGGPL----MYPLLACSVIALTVVIERAVFWAGVEYHRRRELVDEVLELSRAGR 56
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
L+ V + + + + I +S + + D EL+ +
Sbjct: 57 LDRVREKVSGCRDY-VIRILVSGI--LHRDFSPAKAMEAAAAD------------ELQRM 101
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYY-SNNVVSIPGIIESLISILLGLC 187
+ L +M + L+GILG V+G++ F+ + GI ++LI+ GL
Sbjct: 102 RRFMGVLDTMITVAPLLGILGTVVGIINSFEMLETAGIEEPGKVTAGIAQALITTAAGLS 161
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
++I S YN F ++ A+ +E +A I + E
Sbjct: 162 IAIFSVFPYNYFNARAENAALNIEKYATSLEIIFQKTAE 200
>gi|167753803|ref|ZP_02425930.1| hypothetical protein ALIPUT_02088 [Alistipes putredinis DSM 17216]
gi|167658428|gb|EDS02558.1| hypothetical protein ALIPUT_02088 [Alistipes putredinis DSM 17216]
Length = 263
Score = 99.1 bits (246), Expect = 4e-19, Method: Composition-based stats.
Identities = 31/200 (15%), Positives = 78/200 (39%), Gaps = 18/200 (9%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFI----TLRRQFREFEQLFWSGQSLETVCKSLKNHHNIG 83
+ + + + ++ I++ + ++ + E+ G K + +
Sbjct: 73 MLPVLLCLVFGLAIAIERMLYLSLSTINSKKLIAQVEEALKKGGI--EAAKEVCRNKRGP 130
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
+A+IF + + + D +++ + + + + LS++G +
Sbjct: 131 VASIFYQGLDRYNQGL-----------DSVEKAVVSYGSVQTGRMESGLSWIGLFIALSP 179
Query: 144 LVGILGAVLGMMGFFQSIAGYYS-NNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIED 202
++G +G V+GM+ F +I + + GI +L++ LLGL ++ + YN +
Sbjct: 180 MLGFMGTVVGMIEAFDAIQAAGDISPTLVAGGIKVALLTTLLGLIAAVILQLFYNYIVSK 239
Query: 203 SKKFAMQMEGFANEFSAILS 222
ME + IL+
Sbjct: 240 IDSLVNDMEDSSITLMDILT 259
>gi|260778808|ref|ZP_05887700.1| MotA/TolQ/ExbB proton channel family protein [Vibrio
coralliilyticus ATCC BAA-450]
gi|260604972|gb|EEX31267.1| MotA/TolQ/ExbB proton channel family protein [Vibrio
coralliilyticus ATCC BAA-450]
Length = 452
Score = 99.1 bits (246), Expect = 4e-19, Method: Composition-based stats.
Identities = 42/213 (19%), Positives = 87/213 (40%), Gaps = 31/213 (14%)
Query: 18 MQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLK 77
+Q G V II L ++ + + + V+ R++ R KS +
Sbjct: 259 LQAGGVVGKIILGLL---VIGLIIAVVRGVSLSIARQKIRAQL-------------KSPQ 302
Query: 78 NHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGS 137
N N L + E S + ++ + + E + + LS L
Sbjct: 303 NPGNNPLGRVLSVYGKEKNLSV-----------EALELRLLETVVDEQATLEKGLSMLKL 351
Query: 138 MSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-VVSIPGIIESLISILLGLCVSIPSSIAY 196
+++ ++G+LG V GM+ FQ I + + + V GI +L++ +LGL ++P +A+
Sbjct: 352 LAALAPMLGLLGTVTGMIETFQVITQFGNGDPKVMAGGISMALVTTVLGLVAAMPLLLAH 411
Query: 197 NKFIEDSKKFAMQMEGFANEFSAILSRQTEGNI 229
N ++ +E ++++ Q E ++
Sbjct: 412 NILSSQAETIRNILEKQG---ISLVAEQAEKDL 441
>gi|209518569|ref|ZP_03267389.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. H160]
gi|209501019|gb|EEA01055.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. H160]
Length = 207
Score = 99.1 bits (246), Expect = 4e-19, Method: Composition-based stats.
Identities = 43/207 (20%), Positives = 87/207 (42%), Gaps = 21/207 (10%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLA 85
I+ L + +L+ ++II+++ F F S + L+
Sbjct: 16 WIMYPLSLLGVLALTIIIERAYVFAR-----------FASAP-----ARLLQPTSGDDNR 59
Query: 86 AIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE-ITEKLSFLGSMSSAGLL 144
++ +++ + +IA ++E + L L ++ +A L
Sbjct: 60 LDGLAPHHAFRRMAAPWLPESDSPL-WLREASAQSIAAQIERDMGRGLWLLETIVTAAPL 118
Query: 145 VGILGAVLGMMGFFQSIAGYYSNNVV-SIPGIIESLISILLGLCVSIPSSIAYNKFIEDS 203
+G+LG ++GMM FQ G + G+ +SL++ +GL V++ + A+N F
Sbjct: 119 LGLLGTIVGMMKSFQLFGGNGLVDPGGVTGGVAQSLVATAIGLIVAVFALFAFNYFSRRL 178
Query: 204 KKFAMQMEGFAN-EFSAI-LSRQTEGN 228
++ ++E FAN SA+ L R+ G
Sbjct: 179 ERLMDELELFANARLSALRLQREARGE 205
>gi|126660064|ref|ZP_01731185.1| hypothetical protein CY0110_12267 [Cyanothece sp. CCY0110]
gi|126618661|gb|EAZ89409.1| hypothetical protein CY0110_12267 [Cyanothece sp. CCY0110]
Length = 234
Score = 99.1 bits (246), Expect = 4e-19, Method: Composition-based stats.
Identities = 32/191 (16%), Positives = 81/191 (42%), Gaps = 21/191 (10%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITL-RRQFREFEQLFWSGQ-SLE 70
I+ LF++ G ++ L S+ + ++ ++++ +I L ++ R + + + L
Sbjct: 4 IYDLFLKGGP----VMWPLLALSVFTITIALERTWFWIRLLSQENRIVHDVLETARYDLI 59
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
+ ++ + + ++ + + M+ RE ++ +
Sbjct: 60 EAQRIAQHARFLPIGRFLLA-----------PLQLKKPSPETFRLAMEARGDREFIQMRK 108
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV----SIPGIIESLISILLGL 186
FL ++ + L+G+LG V G++ F ++ N+ + GI E+LI+ G+
Sbjct: 109 GDKFLETVIAVAPLLGLLGTVTGLITTFNNLKIGEGANLAETSQAAAGISEALITTAAGM 168
Query: 187 CVSIPSSIAYN 197
V+I + + Y
Sbjct: 169 IVAILALLIYR 179
>gi|78355500|ref|YP_386949.1| biopolymer transport proteins-like [Desulfovibrio desulfuricans
subsp. desulfuricans str. G20]
gi|78217905|gb|ABB37254.1| outer membrane transport energization protein ExbB [Desulfovibrio
desulfuricans subsp. desulfuricans str. G20]
Length = 465
Score = 99.1 bits (246), Expect = 4e-19, Method: Composition-based stats.
Identities = 34/209 (16%), Positives = 81/209 (38%), Gaps = 19/209 (9%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLET 71
++ M G+ + I+ + ++ ++ ++ V +R R+ + G
Sbjct: 267 TMLTAVMDGGMFLWPIMLI----GVVGLLLVAERCVTLGRVRANGRQAVEQVLHGDR--- 319
Query: 72 VCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEK 131
+ ++ C G ++++R ++ A+ EL +
Sbjct: 320 --NMTAQAGRTPAERVV-------RRMCTPGGTPDDA--EQMERRLEQAVLEELPPLERF 368
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-VVSIPGIIESLISILLGLCVSI 190
L + +++ L+G+LG V G++ F+ I + + + + GI E+L++ GL V+I
Sbjct: 369 LQTIRVLAAISPLLGLLGTVSGIIQTFRIITAHGNGDPKLLSAGISEALLTTEAGLLVAI 428
Query: 191 PSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
P + ++ + ME A
Sbjct: 429 PLLLCHHFLTRRVNTVMLDMEAAGTSLIA 457
>gi|256420471|ref|YP_003121124.1| MotA/TolQ/ExbB proton channel [Chitinophaga pinensis DSM 2588]
gi|256035379|gb|ACU58923.1| MotA/TolQ/ExbB proton channel [Chitinophaga pinensis DSM 2588]
Length = 286
Score = 99.1 bits (246), Expect = 4e-19, Method: Composition-based stats.
Identities = 40/204 (19%), Positives = 86/204 (42%), Gaps = 11/204 (5%)
Query: 14 FALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE-----QLFWSGQS 68
FA Q G V +I++L I + +I++ + + +F + Q + ++
Sbjct: 73 FATVYQGGAIVPILISVLLI----CVTFVIERFLYINKAKGKFSGADLVRRVQFHLANKN 128
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
++ + + + + ++K+ I ++ A EL +
Sbjct: 129 VDAALAECDKQKGS-VGNVMKAGLKKYKEMITNTELDTEQKILTIKNEIEETTALELPMM 187
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISILLGLC 187
+ L FL +++S L+G+ G VLGM+ F +++ + + + GI E+LI+ LG+
Sbjct: 188 EKNLVFLSTIASVATLLGLFGTVLGMIKSFSAMSAGGAPDSAKLALGISEALINTALGIG 247
Query: 188 VSIPSSIAYNKFIEDSKKFAMQME 211
S + I YN F + ++
Sbjct: 248 TSAIAIIMYNFFTTNIDGITYAID 271
>gi|115374712|ref|ZP_01461989.1| biopolymer transport protein, ExbB [Stigmatella aurantiaca DW4/3-1]
gi|115368283|gb|EAU67241.1| biopolymer transport protein, ExbB [Stigmatella aurantiaca DW4/3-1]
Length = 195
Score = 99.1 bits (246), Expect = 4e-19, Method: Composition-based stats.
Identities = 29/159 (18%), Positives = 66/159 (41%), Gaps = 13/159 (8%)
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
++ +A IF++ +++ G ++ ++ A+ +
Sbjct: 22 AAARTASERSKAAVADIFLAGFDRLERARLTGG--------GVESAVERERAQVGLRLRR 73
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSI-----AGYYSNNVVSIPGIIESLISILLG 185
L L ++ S VG+ G V G+M F+ + +G + GI E+LI+ +G
Sbjct: 74 NLWLLATIGSLAPFVGLFGTVAGIMRSFKDLGLDVESGGTGGTATVMTGISEALIATAVG 133
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+ V++ + + YN F + +++ +EF +L +
Sbjct: 134 ILVAVMAMVFYNYFQARLARVLVELRLLGDEFVELLRER 172
>gi|291286749|ref|YP_003503565.1| MotA/TolQ/ExbB proton channel [Denitrovibrio acetiphilus DSM 12809]
gi|290883909|gb|ADD67609.1| MotA/TolQ/ExbB proton channel [Denitrovibrio acetiphilus DSM 12809]
Length = 207
Score = 99.1 bits (246), Expect = 4e-19, Method: Composition-based stats.
Identities = 41/211 (19%), Positives = 85/211 (40%), Gaps = 21/211 (9%)
Query: 16 LFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQL--FWSGQSLETVC 73
L + G + LF S+L ++ ++ +I+ R ++ Q
Sbjct: 6 LIEKGGFL----MYPLFFCSLLLITIFFERLWFYISNRSDAEKYRQAKQLVENGRFGDAK 61
Query: 74 KSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLS 133
L N L +F+ ++ + S ++ ++ +EL+ + L
Sbjct: 62 NVL-NGSKGALERVFLEVLNNLRCSRHD-----------LEHIVSNKGVQELQRFNKNLH 109
Query: 134 FLGSMSSAGLLVGILGAVLGMMGFFQSIA---GYYSNNVVSIPGIIESLISILLGLCVSI 190
+ + ++G+ G V+GM+ FQ++A G N + GI ESL++ + GL V I
Sbjct: 110 IMELIGRIAPMLGLSGTVVGMVAAFQAVASSTGGAVNPALLASGIWESLLTTVAGLFVGI 169
Query: 191 PSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
P+ I Y+ F + ++ ++ E +
Sbjct: 170 PALIFYHFFEKQFVIKSIDLKIKGEEIVRLF 200
>gi|332298578|ref|YP_004440500.1| MotA/TolQ/ExbB proton channel [Treponema brennaborense DSM 12168]
gi|332181681|gb|AEE17369.1| MotA/TolQ/ExbB proton channel [Treponema brennaborense DSM 12168]
Length = 207
Score = 99.1 bits (246), Expect = 4e-19, Method: Composition-based stats.
Identities = 38/189 (20%), Positives = 75/189 (39%), Gaps = 13/189 (6%)
Query: 29 TLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIF 88
L S +I ++ F +++++ + V + + H +
Sbjct: 15 IGLCAVSAT--FIIFERLYYFFSIKKR---------DTPLVSEVSRLIAAHRYEDAVSYC 63
Query: 89 MSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGIL 148
++A + + K +D I + V + E+ L+ LG++++ L+G+L
Sbjct: 64 VNADTPAARVVKKAVECRTWPEDHIREAVSVETDTVIPELEHFLTPLGTIANISTLLGLL 123
Query: 149 GAVLGMMGFFQSIAGYYS--NNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKF 206
G V G + F + S + I E+L++ GL VSIPS I +N FI +
Sbjct: 124 GTVTGNIQAFGLLGAGGSMGDPASLAGAIAEALVTTAAGLVVSIPSVIFHNYFISRVNRR 183
Query: 207 AMQMEGFAN 215
+E +
Sbjct: 184 ITDIEAAST 192
>gi|74316375|ref|YP_314115.1| putative transport protein ExbB2 [Thiobacillus denitrificans ATCC
25259]
gi|74055870|gb|AAZ96310.1| putative transport protein ExbB2 [Thiobacillus denitrificans ATCC
25259]
Length = 555
Score = 99.1 bits (246), Expect = 5e-19, Method: Composition-based stats.
Identities = 48/199 (24%), Positives = 74/199 (37%), Gaps = 14/199 (7%)
Query: 40 SVIIQKSVNFITLRRQFREFEQLFWSGQS----LETVCKSLKNHHNIGLAAIFMSAMSEW 95
V+I K+V + + F + F S L+ + + L ++ A E
Sbjct: 354 WVMIAKAVYVNLVDAANQSFLEKFRELSSDLGALDKSTQMADAFRHSSLYRLYHIAAQEL 413
Query: 96 KKSCDKGARSPIG---------IQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVG 146
S + D I +D + RE +T + L S G +G
Sbjct: 414 SHRFKDTDASHLAEHDKNLTPQALDSIRASLDTGMVRESGLLTRLMVLLTIAISGGPFIG 473
Query: 147 ILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKK 205
+LG VLG+M F IA NV PGI +L++ G+ V+IP+ YN K
Sbjct: 474 LLGTVLGVMITFAVIAATGDVNVNAIAPGIAAALMATAAGMAVAIPALFGYNYLNSRIKT 533
Query: 206 FAMQMEGFANEFSAILSRQ 224
M F +E L+
Sbjct: 534 ITSDMRVFIDELVTKLAEN 552
>gi|206593901|emb|CAQ60828.1| putative biopolymer transport exbb-like (partial sequence)
transmembrane protein [Ralstonia solanacearum IPO1609]
Length = 347
Score = 99.1 bits (246), Expect = 5e-19, Method: Composition-based stats.
Identities = 25/100 (25%), Positives = 48/100 (48%)
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLIS 181
+ + L+ LG+++S L+G+ G V+GM+ F S +N GI +L +
Sbjct: 242 QKVAHRLERYLNALGTIASVAPLMGLFGTVVGMIEIFGSQTAAGTNPQTLAHGISVALYN 301
Query: 182 ILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
LGL V+IP+ I + F + +++E + + +
Sbjct: 302 TALGLVVAIPTLIFWRYFRGVVDNYVVELEHLSATYLDAI 341
>gi|188997280|ref|YP_001931531.1| MotA/TolQ/ExbB proton channel [Sulfurihydrogenibium sp. YO3AOP1]
gi|188932347|gb|ACD66977.1| MotA/TolQ/ExbB proton channel [Sulfurihydrogenibium sp. YO3AOP1]
Length = 147
Score = 99.1 bits (246), Expect = 5e-19, Method: Composition-based stats.
Identities = 29/86 (33%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLG 185
+ ++L L + + +G+ G VLG++ F S+A V V + GI E+L++ +G
Sbjct: 58 SLEKRLGILATFGNNAPFIGLFGTVLGIIKAFHSLATSTEFGVRVVMAGISEALVATAMG 117
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQME 211
L V+IP+ IAYN F+ +K M E
Sbjct: 118 LFVAIPAVIAYNYFVRKAKFLMMVYE 143
>gi|86608301|ref|YP_477063.1| MotA/TolQ/ExbB family proton transporter [Synechococcus sp.
JA-2-3B'a(2-13)]
gi|86556843|gb|ABD01800.1| proton transporter, MotA/TolQ/ExbB proton channel family
[Synechococcus sp. JA-2-3B'a(2-13)]
Length = 231
Score = 98.7 bits (245), Expect = 5e-19, Method: Composition-based stats.
Identities = 39/207 (18%), Positives = 86/207 (41%), Gaps = 17/207 (8%)
Query: 29 TLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG--QSLETVCKSLKNHHNIGLAA 86
L FS+ S + I++ + + + + E Q S ++ L+ + ++ +A
Sbjct: 9 IPLLTFSVFSVACCIERVLFWWKITHRQEEVVQQALSQYRRNPRAAQYLLEQNADLPIAR 68
Query: 87 IFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVG 146
IF++ + + SP + ++ A+A E+ + + ++ + +G
Sbjct: 69 IFLAGL-------ELNEASPEDFK----LALETALAAEVPLLKRFNTVFDTVITVAPFLG 117
Query: 147 ILGAVLGMMGFFQSIA---GYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDS 203
+LG V G++ SI ++ GI E+L S GL V+IP+ + N F
Sbjct: 118 LLGTVTGIIQILSSIQLGDIGGTDTQGVGRGIAEALYSTAFGLIVAIPTLLISNVFRSLY 177
Query: 204 KKFAMQMEGFANEFSAILSRQTEGNIS 230
+ +++ + +L RQ + +
Sbjct: 178 LRQLSKIQEYGG-MLELLHRQRQEMQA 203
>gi|332830249|gb|EGK02877.1| hypothetical protein HMPREF9455_01127 [Dysgonomonas gadei ATCC
BAA-286]
Length = 273
Score = 98.7 bits (245), Expect = 5e-19, Method: Composition-based stats.
Identities = 42/211 (19%), Positives = 85/211 (40%), Gaps = 13/211 (6%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITL--RRQFREF---EQLFWSG 66
+I Q G + +ITLL + + SV ++ + +F +
Sbjct: 54 NILGTLYQGGWVIPIVITLLLT--VFTLSV--ERFFALNRASGKGSTAKFVMNAKAKLEA 109
Query: 67 QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
+ L + +A I + + + I + ++ A EL
Sbjct: 110 GDIA-GASKLCDEQKGSVANILKAGLIRYADVEKLTDLHNDEKAAIIQKEIEEATTLELP 168
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-VVSIPGIIESLISILLG 185
+ + LS + ++S+ G L+G+ G VLGM+ F ++A + + V GI E+L++ +G
Sbjct: 169 YLQQNLSVIATISTLGTLMGLFGTVLGMIKSFGAMAQEGAPDSTVLALGISEALMNTAMG 228
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQME--GFA 214
+ + I+Y+ F + ++ GFA
Sbjct: 229 IGTGACAIISYSYFSGKVEDMTNAVDEVGFA 259
>gi|148244109|ref|YP_001220345.1| MotA/TolQ/ExbB proton channel [Acidiphilium cryptum JF-5]
gi|146400672|gb|ABQ29203.1| outer membrane transport energization protein ExbB [Acidiphilium
cryptum JF-5]
Length = 221
Score = 98.7 bits (245), Expect = 5e-19, Method: Composition-based stats.
Identities = 30/189 (15%), Positives = 68/189 (35%), Gaps = 12/189 (6%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLA 85
++ +L +++ +VII + G S+ ++ + LA
Sbjct: 15 GVLYVLAGLFVIAVAVIIDRMWYLRRA----------ILRGGSIVRRMAAMGRVNEQDLA 64
Query: 86 AI--FMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
A+ F M E ++ MD AI + ++ L ++ +
Sbjct: 65 ALRDFAGRMPEGLLLDTALNHMNDADHAGMNSRMDEAIMLVAPRLDRRMWVLDTIVTLAP 124
Query: 144 LVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDS 203
L+G+ G ++GM F +A G+ ++L++ G+ +++ +N
Sbjct: 125 LLGLFGTIIGMFHAFSILATPGHAPAEVTGGVADALVATACGIFIAMIGLATFNMLQNQV 184
Query: 204 KKFAMQMEG 212
+ Q+E
Sbjct: 185 RLIIHQLET 193
>gi|326385756|ref|ZP_08207385.1| MotA/TolQ/ExbB proton channel [Novosphingobium nitrogenifigens DSM
19370]
gi|326209735|gb|EGD60523.1| MotA/TolQ/ExbB proton channel [Novosphingobium nitrogenifigens DSM
19370]
Length = 575
Score = 98.7 bits (245), Expect = 5e-19, Method: Composition-based stats.
Identities = 42/202 (20%), Positives = 72/202 (35%), Gaps = 23/202 (11%)
Query: 33 IFSILS---WSVI--------------IQKSVNFITLRRQFREFEQLFWSGQSLETVCKS 75
I S++S W +I + K V + F T
Sbjct: 357 IASMVSLDGWVIIGFTLILGFIAGEVSLTKVVQLRRIAAGNARFI----GATGTATAPDP 412
Query: 76 LKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFL 135
A I +A ++ P G + + + E + + L L
Sbjct: 413 TAFFAQSSFARIEATAQK-LSAVREEDGSVPEGQIELVRSAVARTQIDEAAALNKGLVML 471
Query: 136 GSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVS-IPGIIESLISILLGLCVSIPSSI 194
S +G+LG V+G+M F +IA NV + PGI +L ++GL V+IP+
Sbjct: 472 TLTISGAPFLGLLGTVIGVMITFAAIAASGDVNVNTIAPGISAALACTVVGLVVAIPTVF 531
Query: 195 AYNKFIEDSKKFAMQMEGFANE 216
AYN + ++ M+ + +
Sbjct: 532 AYNILMARIREQLTAMDVYGED 553
>gi|317485475|ref|ZP_07944353.1| MotA/TolQ/ExbB proton channel family protein [Bilophila wadsworthia
3_1_6]
gi|316923304|gb|EFV44512.1| MotA/TolQ/ExbB proton channel family protein [Bilophila wadsworthia
3_1_6]
Length = 189
Score = 98.7 bits (245), Expect = 5e-19, Method: Composition-based stats.
Identities = 40/207 (19%), Positives = 89/207 (42%), Gaps = 37/207 (17%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+S F + G + + + S+L+ ++++ K++ + T L
Sbjct: 5 MSFADFFAKGGPL----MWPILLCSVLALAIVLFKTLEYTTA----------------LH 44
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
T+ K +K +I L F++ + E + D + + + R++ ++
Sbjct: 45 TLGK-IKQGDSIPLP-WFLAPICERLGTAD-------------EETLSLTANRQVRKLER 89
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYS--NNVVSIPGIIESLISILLGLCV 188
L L +++ ++G+ G V GM+ FQ+I + S + V GI E+LI+ GL V
Sbjct: 90 GLGVLELITTIAPILGLTGTVTGMISTFQAIGEHGSRVDPSVLAGGIWEALITTAAGLLV 149
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFAN 215
++P+ +AY+ + ++ +
Sbjct: 150 ALPAHVAYHFLENRLSELIQTVQEIVD 176
>gi|194365174|ref|YP_002027784.1| MotA/TolQ/ExbB proton channel [Stenotrophomonas maltophilia R551-3]
gi|194347978|gb|ACF51101.1| MotA/TolQ/ExbB proton channel [Stenotrophomonas maltophilia R551-3]
Length = 220
Score = 98.7 bits (245), Expect = 5e-19, Method: Composition-based stats.
Identities = 29/113 (25%), Positives = 58/113 (51%), Gaps = 1/113 (0%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
+D++ ++ + + L+ LG+++SAG L+G+LG V+GM+ F I + +V
Sbjct: 85 RDQLRERIEDTGRHLVHRMERFLNALGTIASAGPLLGLLGTVIGMIQMFLGILDHGVGDV 144
Query: 170 -VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
GI ++L+ G+ V+IP+ + + F + ++ME A+ L
Sbjct: 145 NQLAGGIGKALVCTATGMIVAIPALMFHRYFKGRIHGYVVEMEQEASALLDTL 197
>gi|90414941|ref|ZP_01222904.1| putative biopolymer transport protein; ExbB-related protein
[Photobacterium profundum 3TCK]
gi|90323941|gb|EAS40539.1| putative biopolymer transport protein; ExbB-related protein
[Photobacterium profundum 3TCK]
Length = 455
Score = 98.7 bits (245), Expect = 5e-19, Method: Composition-based stats.
Identities = 39/202 (19%), Positives = 80/202 (39%), Gaps = 23/202 (11%)
Query: 19 QMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKN 78
G+ + I+ LL I I + + + +R+Q + K +
Sbjct: 266 NGGVVGQVILGLLAIGGI----IALFRGTKLFIIRQQIKGQL-------------KQPQM 308
Query: 79 HHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSM 138
N L + ++ ++G + ++ + I E + + + LS L +
Sbjct: 309 PGNNPLGRVLSVFYDNKERYTEQGRS-----VEALELRLLETIVDEQQHLEKGLSMLKLL 363
Query: 139 SSAGLLVGILGAVLGMMGFFQSIAGYYSNN-VVSIPGIIESLISILLGLCVSIPSSIAYN 197
++ ++G+LG V GM+ FQ I + + + V GI +LI+ +LGL ++P +A+N
Sbjct: 364 AALAPMLGLLGTVTGMIETFQVITQFGNGDPKVMAGGISMALITTVLGLVAAMPLLLAHN 423
Query: 198 KFIEDSKKFAMQMEGFANEFSA 219
+ +E A
Sbjct: 424 ILSTQADTIRNILEKQGISLVA 445
>gi|237756443|ref|ZP_04584981.1| MotA/TolQ/ExbB proton channel [Sulfurihydrogenibium yellowstonense
SS-5]
gi|237691391|gb|EEP60461.1| MotA/TolQ/ExbB proton channel [Sulfurihydrogenibium yellowstonense
SS-5]
Length = 147
Score = 98.7 bits (245), Expect = 6e-19, Method: Composition-based stats.
Identities = 28/86 (32%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLG 185
+ ++L L + + +G+ G VLG++ F S++ V V + GI E+L++ +G
Sbjct: 58 SLEKRLGILATFGNNAPFIGLFGTVLGIIKAFHSLSTSTEFGVRVVMAGISEALVATAMG 117
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQME 211
L V+IP+ IAYN F+ +K M E
Sbjct: 118 LFVAIPAVIAYNYFVRKAKFLMMVYE 143
Score = 36.7 bits (84), Expect = 2.7, Method: Composition-based stats.
Identities = 9/34 (26%), Positives = 24/34 (70%)
Query: 27 IITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
++ +L I SI+++++II++ + + T+ + +FE
Sbjct: 18 VLYILLIMSIINFAIIIERFITYKTIEKNLTKFE 51
>gi|261211672|ref|ZP_05925959.1| MotA/TolQ/ExbB proton channel family protein [Vibrio sp. RC341]
gi|260839022|gb|EEX65654.1| MotA/TolQ/ExbB proton channel family protein [Vibrio sp. RC341]
Length = 458
Score = 98.7 bits (245), Expect = 6e-19, Method: Composition-based stats.
Identities = 38/203 (18%), Positives = 80/203 (39%), Gaps = 28/203 (13%)
Query: 18 MQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLK 77
+Q G + +I +L ++ + + + TLR++ + K+ +
Sbjct: 263 LQAGGVIGNVILVLLGVGLI---IALYRGAVLATLRQKIKAQL-------------KNPE 306
Query: 78 NHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGS 137
+ L I E + S + ++ + A+ E + LS L
Sbjct: 307 QPGDNPLGRILAVYNKEQQHSV-----------EALELRLLEAVVDEQNHLETGLSMLKL 355
Query: 138 MSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-VVSIPGIIESLISILLGLCVSIPSSIAY 196
+++ ++G+LG V GM+ FQ I + + + V GI +L++ + GL +IP +A+
Sbjct: 356 LAALAPMLGLLGTVTGMIETFQVITQFGNGDPKVMAGGISMALVTTVEGLIAAIPLLLAH 415
Query: 197 NKFIEDSKKFAMQMEGFANEFSA 219
N ++ +E A
Sbjct: 416 NILSAQAETIRNILEKQGIGLVA 438
>gi|332306760|ref|YP_004434611.1| MotA/TolQ/ExbB proton channel [Glaciecola agarilytica 4H-3-7+YE-5]
gi|332174089|gb|AEE23343.1| MotA/TolQ/ExbB proton channel [Glaciecola agarilytica 4H-3-7+YE-5]
Length = 230
Score = 98.7 bits (245), Expect = 6e-19, Method: Composition-based stats.
Identities = 49/203 (24%), Positives = 92/203 (45%), Gaps = 14/203 (6%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLR-RQFREFEQLFWSGQSLET 71
+ L + G+ V LL S+++ +V + K+ F + R EQ F L+
Sbjct: 1 MIDLLVNGGVVV----WLLISLSVVALTVGVFKAWQFYSTRPTPADAIEQAF---GFLQQ 53
Query: 72 VCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEK 131
+ G + +S + DK + + I+D I R +AIA ++
Sbjct: 54 GKHAQALLLVNGQRNYRAALISSTVQLIDKSSLALDDIKDEIYRQAQLAIA----QLNSY 109
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGLCVS 189
L L +++ L+G+ G V+GM+ F+++ AG N V GI ++L++ +GL V+
Sbjct: 110 LRVLEVIATLAPLMGLFGTVIGMIEAFKAMESAGAQVNPAVLSGGIWQALLTTAVGLAVA 169
Query: 190 IPSSIAYNKFIEDSKKFAMQMEG 212
IP S+ + F ++ A ++
Sbjct: 170 IPVSMLNSYFERKAEVEAQAIQN 192
>gi|257464145|ref|ZP_05628526.1| MotA/TolQ/ExbB proton channel [Fusobacterium sp. D12]
Length = 211
Score = 98.7 bits (245), Expect = 6e-19, Method: Composition-based stats.
Identities = 34/195 (17%), Positives = 75/195 (38%), Gaps = 10/195 (5%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAI 87
+ L + SI + S+ +++ + + F S + T C + +H
Sbjct: 18 MWPLLLCSIAAVSIGVERHLYYKKA----------FSSTDFVITFCALMNEYHFEEARKY 67
Query: 88 FMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGI 147
+ K I R++ ++ R ++ + + L +L + ++G+
Sbjct: 68 AEKNTGDAAKLALDTFHMKEDIGKRLESLVYSKAERAIDGMEQHLDYLSVIIGLAPMLGL 127
Query: 148 LGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFA 207
LG + GMM F ++ N + GI E+LI+ + GLC++I + K +
Sbjct: 128 LGTITGMMSSFNALNERLQNPMAVTAGIGEALITTVFGLCIAILGMCIHAYLSSKVKTAS 187
Query: 208 MQMEGFANEFSAILS 222
+ + + I+
Sbjct: 188 LNLSEISEVLVDIME 202
>gi|118588937|ref|ZP_01546344.1| MotA/TolQ/ExbB proton channel [Stappia aggregata IAM 12614]
gi|118438266|gb|EAV44900.1| MotA/TolQ/ExbB proton channel [Stappia aggregata IAM 12614]
Length = 223
Score = 98.7 bits (245), Expect = 6e-19, Method: Composition-based stats.
Identities = 51/193 (26%), Positives = 88/193 (45%), Gaps = 10/193 (5%)
Query: 27 IITLLFIFSILSWSVIIQKSVNFITLR--RQ--FREFEQLFWSGQSLETVCKSLKNHHNI 82
++ +L SI + +VI+ K+V F T R R R+ + SG+ + LK+
Sbjct: 15 VVLILLAISIAAVAVILAKAVQFSTARVGRHGPVRQAVSQWRSGERTKASQNLLKDRSLS 74
Query: 83 GLAAIFMSAMSEWKKSCDKGARSPIG--IQDRIDRMMDVAIARELEEITEKLSFLGSMSS 140
G A+ SAM + + S + ++R+ + A L + L L ++
Sbjct: 75 G--ALVRSAMDAIQMLDQQPLSSQVRDIREERLREEISARAADRLFRLASWLKALDLVTQ 132
Query: 141 AGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNK 198
L+G+ G VLGM+ FQ++ +G +N GI +L++ GL V++P SIA
Sbjct: 133 ISPLLGLFGTVLGMIETFQTLQESGASANPATLAGGIWVALLTTACGLAVAMPVSIAVTW 192
Query: 199 FIEDSKKFAMQME 211
F +K +E
Sbjct: 193 FETRLEKERAALE 205
>gi|329121476|ref|ZP_08250100.1| TonB family auxiliary protein ExbB [Dialister micraerophilus DSM
19965]
gi|327469391|gb|EGF14861.1| TonB family auxiliary protein ExbB [Dialister micraerophilus DSM
19965]
Length = 201
Score = 98.7 bits (245), Expect = 6e-19, Method: Composition-based stats.
Identities = 39/217 (17%), Positives = 88/217 (40%), Gaps = 20/217 (9%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREF---EQLFWSGQ 67
+ I LF + G ++ LL + SI + +++ ++ + + + + + SG+
Sbjct: 1 MEIIELFQKGGF----VMYLLLLASICTIAILAERFMFYRKALKGIVPYTDNLEKILSGK 56
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
S E + +S ++N+ + + +E K+ G + + +D +
Sbjct: 57 SWEEIMQSSLIYNNVAVIMV-----NETAKAVLNGYDAEL--------ALDRTYTALAAQ 103
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLC 187
L++L ++ + L+G+LG + GM+ FQ + GI E+L + GL
Sbjct: 104 FRRGLNYLSAIVTLSPLLGLLGTIFGMINSFQIFNLQAGQPMAITGGIGEALTATAFGLI 163
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
V++ S + F ME + + ++
Sbjct: 164 VAVFSLAVHTYFASRMDNALTIMEKTGAVLLSEVRKR 200
>gi|225847923|ref|YP_002728086.1| MotA/TolQ/ExbB proton channel [Sulfurihydrogenibium azorense
Az-Fu1]
gi|225643722|gb|ACN98772.1| MotA/TolQ/ExbB proton channel [Sulfurihydrogenibium azorense
Az-Fu1]
Length = 146
Score = 98.7 bits (245), Expect = 6e-19, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLG 185
++ ++L L + + +G+ G VLG++ F + V V + GI E+L++ +G
Sbjct: 58 QLEKRLGILATFGNNAPFIGLFGTVLGVIKAFHHLGTSSEFGVRVVMTGISEALVATAMG 117
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEG 212
L V+IP+ I YN F+ K M E
Sbjct: 118 LFVAIPAVIGYNYFVRKMKFLLMIYES 144
>gi|198284024|ref|YP_002220345.1| MotA/TolQ/ExbB proton channel [Acidithiobacillus ferrooxidans ATCC
53993]
gi|218666202|ref|YP_002426668.1| MotA/TolQ/ExbB proton channel family protein [Acidithiobacillus
ferrooxidans ATCC 23270]
gi|198248545|gb|ACH84138.1| MotA/TolQ/ExbB proton channel [Acidithiobacillus ferrooxidans ATCC
53993]
gi|218518415|gb|ACK79001.1| MotA/TolQ/ExbB proton channel family protein [Acidithiobacillus
ferrooxidans ATCC 23270]
Length = 227
Score = 98.3 bits (244), Expect = 6e-19, Method: Composition-based stats.
Identities = 30/201 (14%), Positives = 78/201 (38%), Gaps = 12/201 (5%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE--TVCKSLKNHHNIG 83
++ +L ++ SVI+ + + F S L+ T+ + ++
Sbjct: 15 GVLYVLGALLLVELSVIVDRFWFLRRTILRGLIFVHELGSHGRLDRDTLNQMADGASDLP 74
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
AA+ A S + + + ++ ++ ++ +L L ++ +
Sbjct: 75 EAALLRMAASHHGQVKG----------EGLASRLEESVLVLAPQLDRRLWLLDTIITLAP 124
Query: 144 LVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDS 203
L+G+ G ++GM F +A G+ ++L++ GL +++ +A+N F
Sbjct: 125 LLGLFGTIIGMFHAFSVLATPGHAPTAVTGGVADALVATATGLFIAMLGLMAFNAFNNQV 184
Query: 204 KKFAMQMEGFANEFSAILSRQ 224
++ +Q++ + Q
Sbjct: 185 RQILLQLDSVKTMLLNRMDGQ 205
>gi|313206440|ref|YP_004045617.1| outer membrane transport energization protein exbb [Riemerella
anatipestifer DSM 15868]
gi|312445756|gb|ADQ82111.1| outer membrane transport energization protein ExbB [Riemerella
anatipestifer DSM 15868]
gi|315023619|gb|EFT36623.1| MotA/TolQ/ExbB proton channel [Riemerella anatipestifer RA-YM]
gi|325336116|gb|ADZ12390.1| ExbD1 [Riemerella anatipestifer RA-GD]
Length = 288
Score = 98.3 bits (244), Expect = 7e-19, Method: Composition-based stats.
Identities = 33/207 (15%), Positives = 80/207 (38%), Gaps = 12/207 (5%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITL--RRQFREFE---QLFWSG 66
S + G V +L +F I ++ + +F + +
Sbjct: 73 SFMGIIYMGGPVVH----ILILFMITVIVFSFERFFVIKKAQGKGNLDKFVLDVRRLLNQ 128
Query: 67 QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
++ + L + + + + +K + + + + ++ A E+
Sbjct: 129 NKIDEAIE-LCDAQQGSVGNVVKEGLVTYKALANDSSMDKEKKMVALTKALEEATTLEMP 187
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI-AGYYSNNVVSIP-GIIESLISILL 184
+ + + L ++ + LV +LG V+GM+ F ++ +G + + ++ GI E+LI+ L
Sbjct: 188 MLEKNMMILSTLGTVATLVALLGTVIGMIKAFFALGSGGGTPDAAALSIGISEALINTAL 247
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQME 211
G+ S + I YN F +++
Sbjct: 248 GIGTSAIAIILYNFFTSKIDGLTYKID 274
>gi|253998349|ref|YP_003050412.1| MotA/TolQ/ExbB proton channel [Methylovorus sp. SIP3-4]
gi|313200423|ref|YP_004039081.1| mota/tolq/exbb proton channel [Methylovorus sp. MP688]
gi|253985028|gb|ACT49885.1| MotA/TolQ/ExbB proton channel [Methylovorus sp. SIP3-4]
gi|312439739|gb|ADQ83845.1| MotA/TolQ/ExbB proton channel [Methylovorus sp. MP688]
Length = 201
Score = 98.3 bits (244), Expect = 7e-19, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 56/117 (47%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
++ + ++ + ++ + L+ LG++++ L+G+LG V+GM+ F + +
Sbjct: 85 REVMKEAIEESGRAVAHKLEKYLTTLGTIATVSPLLGLLGTVIGMVELFGAFTATGHDVA 144
Query: 170 VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
GI +L + G+ V++P+ I Y F ++ME A + ++ + +
Sbjct: 145 QFARGISVALYNTAGGIVVAVPAMIFYRYFRGKVDGLIVEMEQQAVKLVELIHGERK 201
>gi|268680683|ref|YP_003305114.1| MotA/TolQ/ExbB proton channel [Sulfurospirillum deleyianum DSM
6946]
gi|268618714|gb|ACZ13079.1| MotA/TolQ/ExbB proton channel [Sulfurospirillum deleyianum DSM
6946]
Length = 148
Score = 98.3 bits (244), Expect = 7e-19, Method: Composition-based stats.
Identities = 31/91 (34%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV-SIPGIIESLISILLG 185
+ +L L + + +G+ G VLG++ F +I + +V + GI E+LI+ G
Sbjct: 57 SLESRLGILATFGNNAPFIGLFGTVLGIIQAFHAIGSNNAFDVQPIMQGISEALIATATG 116
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANE 216
L V+IP IAYN F K F Q E NE
Sbjct: 117 LFVAIPCVIAYNYFTRRVKVFLTQKEAQLNE 147
>gi|254784601|ref|YP_003072029.1| transporter proton channel domain containing protein
[Teredinibacter turnerae T7901]
gi|237684010|gb|ACR11274.1| transporter, proton channel domain containing protein
[Teredinibacter turnerae T7901]
Length = 458
Score = 98.3 bits (244), Expect = 7e-19, Method: Composition-based stats.
Identities = 31/124 (25%), Positives = 59/124 (47%), Gaps = 1/124 (0%)
Query: 97 KSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMG 156
+ + + ++ ++ A +EL I L+ L +S L+G+LG V GM+
Sbjct: 329 RVLKVAEENKGADTETLELKLEEATLKELPRIESGLNLLKIISMVAPLLGLLGTVTGMIV 388
Query: 157 FFQSIAGYYSNN-VVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFAN 215
FQ+I Y + + GI +L++ +LGLCV+IP+ + + +K+ +E +
Sbjct: 389 TFQAITIYGAGDPKAMAGGISGALVTTVLGLCVAIPTVLLHTFLNGKAKRIVHVLEEESA 448
Query: 216 EFSA 219
A
Sbjct: 449 GLIA 452
>gi|86135219|ref|ZP_01053801.1| biopolymer transport protein [Polaribacter sp. MED152]
gi|85822082|gb|EAQ43229.1| biopolymer transport protein [Polaribacter sp. MED152]
Length = 240
Score = 98.3 bits (244), Expect = 7e-19, Method: Composition-based stats.
Identities = 36/199 (18%), Positives = 81/199 (40%), Gaps = 18/199 (9%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITL----RRQFREFEQLFWSGQSLETVCKSLKNHHNIG 83
+ ++ + IL ++ I++ + ++ + SG K + +
Sbjct: 50 MGIVLVALILGLAIAIERIIYLNMATTNTKKLLANVDDALSSGGV--EAAKEVCRNTKGP 107
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
+A+IF + R GI++ ++ + ++ ++ + +S++ +
Sbjct: 108 VASIFYQGLD----------RVDEGIEE-AEKAVVSYGGVQMGQLEKNVSWISLFIALAP 156
Query: 144 LVGILGAVLGMMGFFQSIAGYYS-NNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIED 202
++G +G V+GM+G F IA + V GI +L++ + GL V+I I YN +
Sbjct: 157 MLGFMGTVIGMIGAFNDIAVANDISPAVVAGGIKVALLTTVFGLIVAIILQIFYNYIVAK 216
Query: 203 SKKFAMQMEGFANEFSAIL 221
ME + +L
Sbjct: 217 IDSIVNNMEDASISLIDLL 235
>gi|89075637|ref|ZP_01162038.1| putative biopolymer transport protein ExbB-related protein
[Photobacterium sp. SKA34]
gi|89048644|gb|EAR54217.1| putative biopolymer transport protein ExbB-related protein
[Photobacterium sp. SKA34]
Length = 455
Score = 98.3 bits (244), Expect = 8e-19, Method: Composition-based stats.
Identities = 45/212 (21%), Positives = 88/212 (41%), Gaps = 32/212 (15%)
Query: 20 MGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNH 79
G+ K I+ LL I + + I + ++RQ + K+
Sbjct: 261 GGVVGKIILLLLAIGA----GIAIFRGFKLAIVKRQIK-------------QQLKNPTQA 303
Query: 80 HNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMS 139
N L I E +S + ++ + AI E + + + LS L +
Sbjct: 304 GNNPLGRILAVYNKEQNRSV-----------EALELRLLEAIVDEQQGLEKGLSMLKLFA 352
Query: 140 SAGLLVGILGAVLGMMGFFQSIAGYYSNN-VVSIPGIIESLISILLGLCVSIPSSIAYNK 198
+ ++G+LG V GM+ FQ I + + + V GI +L++ +LGL ++P +A+N
Sbjct: 353 ALAPMLGLLGTVTGMIETFQVITQFGNGDPKVMAGGISMALVTTVLGLIAAMPLLLAHNV 412
Query: 199 FIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
++ + +E +++++Q E N S
Sbjct: 413 LSTQAENIRLILEKQG---ISLVAQQAEKNES 441
>gi|255037802|ref|YP_003088423.1| MotA/TolQ/ExbB proton channel [Dyadobacter fermentans DSM 18053]
gi|254950558|gb|ACT95258.1| MotA/TolQ/ExbB proton channel [Dyadobacter fermentans DSM 18053]
Length = 279
Score = 98.3 bits (244), Expect = 8e-19, Method: Composition-based stats.
Identities = 34/218 (15%), Positives = 91/218 (41%), Gaps = 9/218 (4%)
Query: 7 AIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQ--FREFEQLFW 64
+D + + + G V ++T I +L++++ ++ + F +
Sbjct: 60 GPIDGDYYGIVYKGGPIVPILMTCFLI--VLTFTI--ERLITLNKASGSGSIDAFVRKVR 115
Query: 65 SGQSLETVCKSLK--NHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIA 122
S + +++K + + + + + ++K+ + A + + ++ A
Sbjct: 116 SLLDKNQIEEAIKECDKQKGSVGNVIKAGLLKYKQLTTETALDKEQKLAALQKEIEEATT 175
Query: 123 RELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLIS 181
EL + + L+ + +++ A L+ +LG V+GM+ F ++ S + ++ GI E+LI+
Sbjct: 176 LELPMLQKNLTIIATLAGASTLLALLGTVIGMIKAFAALGTSGSPDSAALATGISEALIN 235
Query: 182 ILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
LG+ S ++I+Y ++ +
Sbjct: 236 TALGIGTSAIATISYAYLNSRVDDLTYSIDEIGMSLQS 273
>gi|156977963|ref|YP_001448869.1| hypothetical protein VIBHAR_06759 [Vibrio harveyi ATCC BAA-1116]
gi|156529557|gb|ABU74642.1| hypothetical protein VIBHAR_06759 [Vibrio harveyi ATCC BAA-1116]
Length = 455
Score = 98.0 bits (243), Expect = 8e-19, Method: Composition-based stats.
Identities = 38/203 (18%), Positives = 79/203 (38%), Gaps = 28/203 (13%)
Query: 18 MQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLK 77
+ G V II L + + + + V+ + R++ + KS
Sbjct: 258 LNAGGVVGKIILGLLA---IGLIIALVRGVSLMIARQK-------------IAKQLKSPA 301
Query: 78 NHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGS 137
+ L I + +S + ++ + A+ E + + LS L
Sbjct: 302 QPEDNPLGRILAVYQKDKHRSV-----------EALELRLLEAVVDEQTHLEKGLSMLKL 350
Query: 138 MSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-VVSIPGIIESLISILLGLCVSIPSSIAY 196
+++ ++G+LG V GM+ FQ I + + + V GI +L++ +LGL ++P +A+
Sbjct: 351 LAALAPMLGLLGTVTGMIETFQVITQFGNGDPKVMAGGISMALVTTVLGLVAAMPLLLAH 410
Query: 197 NKFIEDSKKFAMQMEGFANEFSA 219
N ++ +E A
Sbjct: 411 NVLSSQAENIRNILEKQGIGLVA 433
>gi|228471649|ref|ZP_04056423.1| MotA/TolQ/ExbB proton channel family protein [Capnocytophaga
gingivalis ATCC 33624]
gi|228277068|gb|EEK15754.1| MotA/TolQ/ExbB proton channel family protein [Capnocytophaga
gingivalis ATCC 33624]
Length = 233
Score = 98.0 bits (243), Expect = 8e-19, Method: Composition-based stats.
Identities = 37/215 (17%), Positives = 85/215 (39%), Gaps = 21/215 (9%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITL----RRQFREFEQLFWSGQ 67
S F++ G + + + I+ +V I++ + ++ E +G
Sbjct: 30 SFKEYFIKGGP---AYMAPILLCLIIGLAVAIERIIYLTMATTNTKKLLTNVEDALKNGG 86
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ K + + +A+IF + R GI D +++ + ++
Sbjct: 87 T--EAAKEVCRNTPGPVASIFYQGLD----------RVDEGI-DIVEKSVVSYGGVQMGL 133
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGL 186
+ + +S++ S ++G +G V+GM+ F+ I+ + I G I +L++ + GL
Sbjct: 134 LEKNISWISLFISIAPMLGFMGTVIGMIQAFEKISLAGGLDASLIAGDIQVALLTTVFGL 193
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
V++ + YN + ME + +L
Sbjct: 194 IVAMILQVFYNYIVAKVDSIVNDMEDASISLVDLL 228
>gi|313891376|ref|ZP_07824992.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Dialister microaerophilus UPII 345-E]
gi|313120151|gb|EFR43327.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Dialister microaerophilus UPII 345-E]
Length = 201
Score = 98.0 bits (243), Expect = 8e-19, Method: Composition-based stats.
Identities = 39/217 (17%), Positives = 88/217 (40%), Gaps = 20/217 (9%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREF---EQLFWSGQ 67
+ I LF + G ++ LL + SI + +++ ++ + + + + + SG+
Sbjct: 1 MEIIELFQKGGF----VMYLLLLASICTIAILAERFMFYRKALKGIVPYTDNLEKILSGK 56
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
S E + +S ++N+ + + +E K+ G + + +D +
Sbjct: 57 SWEEIMQSSLIYNNVAVIMV-----NETAKAVLNGYDAEL--------ALDRTYTALAAQ 103
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLC 187
L++L ++ + L+G+LG + GM+ FQ + GI E+L + GL
Sbjct: 104 FRRNLNYLSAIVTLSPLLGLLGTIFGMINSFQIFNLQAGQPMAITGGIGEALTATAFGLI 163
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
V++ S + F ME + + ++
Sbjct: 164 VAVFSLAVHTYFASRMDNALTIMEKTGAVLLSEVRKR 200
>gi|163753780|ref|ZP_02160903.1| MotA/TolQ/ExbB proton channel family protein [Kordia algicida OT-1]
gi|161325994|gb|EDP97320.1| MotA/TolQ/ExbB proton channel family protein [Kordia algicida OT-1]
Length = 242
Score = 98.0 bits (243), Expect = 8e-19, Method: Composition-based stats.
Identities = 36/201 (17%), Positives = 76/201 (37%), Gaps = 18/201 (8%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITL----RRQFREFEQLFWSGQSLETVCKSLKNHHNIG 83
+ ++ + IL ++ I++ + +R E +G K + +
Sbjct: 52 MGIVLLCLILGLAICIERIIYLNMASTNNKRLLANVENALATGGV--EAAKEVARNTKGP 109
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
+A+IF + + D ++ + ++ ++ +S++ +
Sbjct: 110 VASIFYQGLDRMDEGV-----------DNAEKAVVAYGGVQMGQLERNVSWISLFIAIAP 158
Query: 144 LVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIPSSIAYNKFIED 202
++G +G V+GM+ F IA S + I I +L++ + GL V I I YN I
Sbjct: 159 MLGFMGTVIGMIQAFDKIAAVGSLDASLIASSIQVALLTTVFGLIVGIILQIFYNYIIAK 218
Query: 203 SKKFAMQMEGFANEFSAILSR 223
ME + +L R
Sbjct: 219 IDSIVNDMEDSSISLIDLLVR 239
>gi|86146650|ref|ZP_01064971.1| TolQ protein [Vibrio sp. MED222]
gi|85835497|gb|EAQ53634.1| TolQ protein [Vibrio sp. MED222]
Length = 458
Score = 98.0 bits (243), Expect = 9e-19, Method: Composition-based stats.
Identities = 39/213 (18%), Positives = 85/213 (39%), Gaps = 31/213 (14%)
Query: 18 MQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLK 77
+Q G V +I L + + + + ++ R++ R K +
Sbjct: 263 LQAGGLVGKVILGLLA---IGLIIALVRGISLAIARQKIRAQL-------------KKPE 306
Query: 78 NHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGS 137
+ L + E ++ + ++ + A+ E + + LS L
Sbjct: 307 QAGDNPLGRVLAVYSKEKNQTV-----------EALELRLLEAVVDEQTHLEKGLSMLKL 355
Query: 138 MSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-VVSIPGIIESLISILLGLCVSIPSSIAY 196
+++ ++G+LG V GM+ FQ I + + + V GI +L++ +LGL ++P +A+
Sbjct: 356 LAALAPMLGLLGTVTGMIETFQVITQFGNGDPKVMAGGISMALVTTVLGLVAAMPLLLAH 415
Query: 197 NKFIEDSKKFAMQMEGFANEFSAILSRQTEGNI 229
N S+ +E +++ Q E +I
Sbjct: 416 NILSTQSENIRNILEKQG---IGLVAEQAEKSI 445
>gi|269961386|ref|ZP_06175751.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|269833937|gb|EEZ88031.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
Length = 455
Score = 98.0 bits (243), Expect = 9e-19, Method: Composition-based stats.
Identities = 37/203 (18%), Positives = 80/203 (39%), Gaps = 28/203 (13%)
Query: 18 MQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLK 77
+ G V II L ++ + + + V+ + R++ + K+
Sbjct: 258 LNAGGVVGQIILGLLAVGLI---IALVRGVSLMIARQK-------------IAKQLKNPT 301
Query: 78 NHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGS 137
+ L I + +S + ++ + A+ E + + LS L
Sbjct: 302 QPEDNPLGRILAVYQKDKHRSV-----------EALELRLLEAVVDEQTHLEKGLSMLKL 350
Query: 138 MSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-VVSIPGIIESLISILLGLCVSIPSSIAY 196
+++ ++G+LG V GM+ FQ I + + + V GI +L++ +LGL ++P +A+
Sbjct: 351 LAALAPMLGLLGTVTGMIETFQVITQFGNGDPKVMAGGISMALVTTVLGLVAAMPLLLAH 410
Query: 197 NKFIEDSKKFAMQMEGFANEFSA 219
N ++ +E A
Sbjct: 411 NVLSSQAENIRNILEKQGIGLVA 433
>gi|262375375|ref|ZP_06068608.1| MotA/TolQ/ExbB proton channel family protein [Acinetobacter lwoffii
SH145]
gi|262309629|gb|EEY90759.1| MotA/TolQ/ExbB proton channel family protein [Acinetobacter lwoffii
SH145]
Length = 212
Score = 98.0 bits (243), Expect = 9e-19, Method: Composition-based stats.
Identities = 49/218 (22%), Positives = 98/218 (44%), Gaps = 15/218 (6%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
++ L G + L + SI ++ I++ + ++ + G S T
Sbjct: 1 MWELVKAGGWL----MLPLVLCSIFMLAISIERLIRL----KKNVVLPSILLMGPSQNTA 52
Query: 73 CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKL 132
K + + L S + G S + M+V ++E+ + + +
Sbjct: 53 QVMQKMNQSAALKQ------STLGRVLAAGYTSKPQGEQYARAQMEVVASQEIGYLEKNI 106
Query: 133 SFLGSMSSAGLLVGILGAVLGMMGFFQSI-AGYYSNNVVSIPGIIESLISILLGLCVSIP 191
+FLG++S+ L+G+LG VLG++ F I G S+ V+ +PGI ++LI+ G+ ++IP
Sbjct: 107 NFLGTLSAVAPLLGLLGTVLGIIESFLMIDVGTGSDPVLMMPGISKALITTAAGMLIAIP 166
Query: 192 SSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNI 229
+ A+ F +++ ++E A F A L + +I
Sbjct: 167 ALFAHRYFQRLVQEYVAELEQQATLFHADLFYRNHADI 204
>gi|89054621|ref|YP_510072.1| MotA/TolQ/ExbB proton channel [Jannaschia sp. CCS1]
gi|88864170|gb|ABD55047.1| outer membrane transport energization protein ExbB [Jannaschia sp.
CCS1]
Length = 228
Score = 98.0 bits (243), Expect = 9e-19, Method: Composition-based stats.
Identities = 48/199 (24%), Positives = 86/199 (43%), Gaps = 21/199 (10%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLET 71
+I L G V LL S+++ S+II K+ F+ +L +G +L+
Sbjct: 9 NISGLVSLGGPVV----ALLLGMSLVALSLIIYKAAQFLRA--GVGRHSRLIRAGAALDR 62
Query: 72 V----CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ L LA +F S M R+ G + R+ +V + L+
Sbjct: 63 GDRAEARQLAGESRNHLAPVFESLMDRMA-----DMRADTGFRARV----EVEASERLDH 113
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLG 185
+ + L S++ L+G+ G VLGM+ FQ++ AG + + GI +L++ G
Sbjct: 114 LEKGFRMLDSIAQIAPLLGLFGTVLGMIDAFQALQSAGDAVDPSILAGGIWVALMTTAAG 173
Query: 186 LCVSIPSSIAYNKFIEDSK 204
L V++P+S+ F +
Sbjct: 174 LGVAMPTSLILTWFETRMQ 192
>gi|218676444|ref|YP_002395263.1| Tol R/Q protein [Vibrio splendidus LGP32]
gi|218324712|emb|CAV26340.1| Tol R/Q protein [Vibrio splendidus LGP32]
Length = 458
Score = 98.0 bits (243), Expect = 9e-19, Method: Composition-based stats.
Identities = 39/213 (18%), Positives = 85/213 (39%), Gaps = 31/213 (14%)
Query: 18 MQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLK 77
+Q G V +I L + + + + ++ R++ R K +
Sbjct: 263 LQAGGLVGKVILGLLA---IGLIIALVRGISLAIARQKIRAQL-------------KKPE 306
Query: 78 NHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGS 137
+ L + E ++ + ++ + A+ E + + LS L
Sbjct: 307 QAGDNPLGRVLAVYSKEKNQTV-----------EALELRLLEAVVDEQTHLEKGLSMLKL 355
Query: 138 MSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-VVSIPGIIESLISILLGLCVSIPSSIAY 196
+++ ++G+LG V GM+ FQ I + + + V GI +L++ +LGL ++P +A+
Sbjct: 356 LAALAPMLGLLGTVTGMIETFQVITQFGNGDPKVMAGGISMALVTTVLGLVAAMPLLLAH 415
Query: 197 NKFIEDSKKFAMQMEGFANEFSAILSRQTEGNI 229
N S+ +E +++ Q E +I
Sbjct: 416 NILSTQSENIRNILEKQG---IGLVAEQAEKSI 445
>gi|218781519|ref|YP_002432837.1| MotA/TolQ/ExbB proton channel [Desulfatibacillum alkenivorans
AK-01]
gi|218762903|gb|ACL05369.1| MotA/TolQ/ExbB proton channel [Desulfatibacillum alkenivorans
AK-01]
Length = 476
Score = 98.0 bits (243), Expect = 9e-19, Method: Composition-based stats.
Identities = 42/207 (20%), Positives = 82/207 (39%), Gaps = 19/207 (9%)
Query: 19 QMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQL---FWSGQSLETVCKS 75
Q G + +I L F++L +++++ V + +R + +
Sbjct: 278 QGGPIIW-VILALGGFAML---LVLERVVFLLRIRVNASKLMAQIQPLAQNGDWKECLDL 333
Query: 76 LKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFL 135
LK + LA + + ++ + AI E+ + LS +
Sbjct: 334 LKAQKSKPLARVLAWGIKHRHLERMD-----------MENALQEAILGEIPALERFLSII 382
Query: 136 GSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCVSIPSSI 194
M++ L+G+LG V GM+ F I Y + + + GI E+L++ +LGL +IP +
Sbjct: 383 AMMAAVAPLLGLLGTVTGMINTFHVITYYGAGDPKMMSGGISEALLTTMLGLAAAIPIML 442
Query: 195 AYNKFIEDSKKFAMQMEGFANEFSAIL 221
A+ + QME A + +
Sbjct: 443 AHTLLSRRIEGSIAQMEEKAVSLANTI 469
>gi|194333413|ref|YP_002015273.1| MotA/TolQ/ExbB proton channel [Prosthecochloris aestuarii DSM 271]
gi|194311231|gb|ACF45626.1| MotA/TolQ/ExbB proton channel [Prosthecochloris aestuarii DSM 271]
Length = 248
Score = 98.0 bits (243), Expect = 9e-19, Method: Composition-based stats.
Identities = 40/208 (19%), Positives = 86/208 (41%), Gaps = 9/208 (4%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITL--RRQFREFEQLFWSGQSL 69
S+F + G V ++ L + I + I+++ + + EF + S
Sbjct: 32 SMFHAVYKGGPVV-SVLMALILMVI---AYIVERIIALNKASGKGNIAEFVKSLKSDVDN 87
Query: 70 ETVCKSLK--NHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ ++ + H LAA+ + +K +++ ++ A E+
Sbjct: 88 GQIDSAISKCDDHQSSLAAVMRAVFERYKVLSIHHVTDREKKISEMEKAVEEATIMEMPL 147
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISILLGL 186
+ + L + +++S +VG+LG +GM+ F ++A + + V + GI E+L + LG+
Sbjct: 148 LEKNLVAISTIASISTMVGLLGTTMGMIRAFTAMATSGAPDAVQLSLGISEALFNTALGI 207
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFA 214
I + YN F F ++ A
Sbjct: 208 FGGIIGIVTYNIFTHKVDAFTYVIDEAA 235
>gi|114706010|ref|ZP_01438913.1| MotA/TolQ/ExbB proton channel family protein [Fulvimarina pelagi
HTCC2506]
gi|114538856|gb|EAU41977.1| MotA/TolQ/ExbB proton channel family protein [Fulvimarina pelagi
HTCC2506]
Length = 241
Score = 98.0 bits (243), Expect = 1e-18, Method: Composition-based stats.
Identities = 39/193 (20%), Positives = 80/193 (41%), Gaps = 16/193 (8%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFIT----LRRQFREFEQLFWSGQSLETVCKSLKNHHN 81
++ +L S+++++V++ K F RR R+ + G + + +
Sbjct: 19 FVVVILAALSVVAFAVVLLKLWQFSREGVGKRRASRQAVDAWVRGDTAKAL--KAAEGGR 76
Query: 82 IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSA 141
+A + SA+ GA + + I+ + L + L L +++
Sbjct: 77 GPVAGVVASAIR--------GAMTRSLARQTIEEDVQRIATERLHSLGSGLRLLEAIAQI 128
Query: 142 GLLVGILGAVLGMMGFFQSIAGYYS--NNVVSIPGIIESLISILLGLCVSIPSSIAYNKF 199
L+G+ G VLGM+ FQ++ S + GI +L++ +GL V++PS + F
Sbjct: 129 APLLGLFGTVLGMIEAFQAMQNAGSDVDPSQLAGGIWVALLTTAVGLAVAMPSQLLTTWF 188
Query: 200 IEDSKKFAMQMEG 212
+ + ME
Sbjct: 189 DGRIENERVAMET 201
>gi|94265095|ref|ZP_01288861.1| MotA/TolQ/ExbB proton channel [delta proteobacterium MLMS-1]
gi|93454425|gb|EAT04720.1| MotA/TolQ/ExbB proton channel [delta proteobacterium MLMS-1]
Length = 473
Score = 98.0 bits (243), Expect = 1e-18, Method: Composition-based stats.
Identities = 36/155 (23%), Positives = 71/155 (45%), Gaps = 12/155 (7%)
Query: 66 GQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
+ ++ +S + + + IF A+ E + ++ MD AI RE+
Sbjct: 313 ARRVDAQLRSDQPRPDNPVGRIF--ALHEANSKLSP---------EALEIRMDEAIHREI 361
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV-SIPGIIESLISILL 184
++ L+ + +++ L+G+LG V+GM+ FQ+I + + + GI ++L++ L
Sbjct: 362 PKLERGLTTIKILAAVAPLLGLLGTVVGMIQTFQAITMFGTGDPQLMAGGISQALVTTAL 421
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
GL V+IP ++ S+ MEG A
Sbjct: 422 GLSVAIPLIFLHSLAAAKSRYLINIMEGQGAGLLA 456
>gi|323141187|ref|ZP_08076088.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Phascolarctobacterium sp. YIT 12067]
gi|322414330|gb|EFY05148.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Phascolarctobacterium sp. YIT 12067]
Length = 208
Score = 98.0 bits (243), Expect = 1e-18, Method: Composition-based stats.
Identities = 29/194 (14%), Positives = 79/194 (40%), Gaps = 10/194 (5%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAI 87
+ L + S + ++ +++ + + +F F C+ + + + +G + +
Sbjct: 18 MWPLLMCSFAAIAIGVERYLFYKKAI-SGEKFASSF---------CRMMNDFNLVGASEL 67
Query: 88 FMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGI 147
+ E + + R++ ++ R ++ + + +++L + ++G+
Sbjct: 68 AEQSKGEAAAMAKEILDIKGDLGQRLETIVYTKADRIIDSLEKNINYLSVVIGLSPMLGL 127
Query: 148 LGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFA 207
LG + GM+ F ++ N + GI E+LI+ + GLC++I + K
Sbjct: 128 LGTITGMISSFNALNERTQNPMAVTAGIGEALITTVFGLCIAIMGMCIHAYLTSKIKTET 187
Query: 208 MQMEGFANEFSAIL 221
+ + A+ I
Sbjct: 188 LNINEVADTLVDIF 201
>gi|118595157|ref|ZP_01552504.1| probable exbB-like biopolymer transport [Methylophilales bacterium
HTCC2181]
gi|118440935|gb|EAV47562.1| probable exbB-like biopolymer transport [Methylophilales bacterium
HTCC2181]
Length = 201
Score = 98.0 bits (243), Expect = 1e-18, Method: Composition-based stats.
Identities = 43/217 (19%), Positives = 84/217 (38%), Gaps = 29/217 (13%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFW-SGQSL-- 69
++ + + G I L SI ++I+++ R+ W SL
Sbjct: 1 MWNIIVVAGWP----IWPLIATSIFGVAIILERLWTL----RESNIAPSNLWIDASSLIS 52
Query: 70 -----ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARE 124
+ ++LK + L I A+ + S I+D I+ +A
Sbjct: 53 SNVVNKESIEALK--KSSPLGEIMAVAI-------ENKNASLAVIKDSIEEAGSLASF-- 101
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILL 184
+ + L FL ++S+ L+G+ G ++GM+ F S + + GI +L +
Sbjct: 102 --RLEKYLGFLSTISTVAPLLGLFGTIIGMVELFSSFTSTGHDVSIFARGISIALYNTAG 159
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
G+ V++P+ IA+ F +ME A ++
Sbjct: 160 GIVVAVPAMIAFRYFRSKVDHLVNEMEQQALRLVEVI 196
>gi|66044878|ref|YP_234719.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. syringae
B728a]
gi|63255585|gb|AAY36681.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. syringae
B728a]
Length = 238
Score = 97.6 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 47/220 (21%), Positives = 89/220 (40%), Gaps = 19/220 (8%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
I+++ L G + + + SI + +II++ R W +
Sbjct: 12 ITVWELVKSGGWM----MLPIILSSIAAAGIIIERLWTLRASRITPPHLLGQVWQWIQEQ 67
Query: 71 TV-CKSLKN-HHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ + LK + L I + ++ + + + ++ A AR + E+
Sbjct: 68 KLDSEKLKQLRADSPLGEILAAGLANSRHGR-----------EIMKECIEEAAARVIHEL 116
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGL 186
LS LGS+++ L+G+LG VLGM+ F S +G +N V GI ++LI GL
Sbjct: 117 ERYLSALGSIAAMAPLLGLLGTVLGMIDIFGSFNSSGATANAGVLAGGISKALICTASGL 176
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
V+IP+ + + + ME A ++ +
Sbjct: 177 IVAIPAIFFHRFLQSRVDELVVGMEQQAIRLVEVVQGDRD 216
>gi|297516491|ref|ZP_06934877.1| colicin uptake protein TolQ [Escherichia coli OP50]
Length = 89
Score = 97.6 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 27/80 (33%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 147 ILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKK 205
+ G V G+M F ++ + + PGI E+LI+ +GL +IP+ +AYN+ + K
Sbjct: 1 MFGTVWGIMHAFIALGAVKQATLQMVAPGIAEALIATAIGLFAAIPAVMAYNRLNQRVNK 60
Query: 206 FAMQMEGFANEFSAILSRQT 225
+ + F EF+AIL RQ
Sbjct: 61 LELNYDNFMEEFTAILHRQA 80
>gi|325983228|ref|YP_004295630.1| MotA/TolQ/ExbB proton channel [Nitrosomonas sp. AL212]
gi|325532747|gb|ADZ27468.1| MotA/TolQ/ExbB proton channel [Nitrosomonas sp. AL212]
Length = 216
Score = 97.6 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 37/206 (17%), Positives = 78/206 (37%), Gaps = 18/206 (8%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFW----SGQSLETVCKSLKNHHN 81
II L + +++ +++++K+ + R + L LE + L + H
Sbjct: 17 IIIIPLVLLGVIAVAIMLEKAFIYWRYARLSSDLLNLVETYGFKWNDLEKILSGLDSRHY 76
Query: 82 IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSA 141
+K+ + + + E + +L L ++ +A
Sbjct: 77 -------------YKRFFEVVISNRHQPTWWTESRAADEAQIIEESLARRLWALETIVTA 123
Query: 142 GLLVGILGAVLGMMGFFQSIAGYY-SNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFI 200
L+G++G V+GMM FQ I N G+ E+LI+ ++GL +++ + +N F
Sbjct: 124 APLLGLVGTVIGMMRAFQVIGSEGLVNPTAVTGGVAEALIATVVGLAIALVALFGFNYFS 183
Query: 201 EDSKKFAMQMEGFANEFSAILSRQTE 226
+ME + R +
Sbjct: 184 RLQSLTMDEMERLGTRLIDNIRRDQQ 209
>gi|117617540|ref|YP_857924.1| hypothetical protein AHA_3435 [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
gi|117558947|gb|ABK35895.1| TolR [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
Length = 457
Score = 97.6 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 28/122 (22%), Positives = 61/122 (50%), Gaps = 1/122 (0%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN- 168
+ ++ +D I R + + + +S + ++S L+G+LG V+GM+ FQ+I + + +
Sbjct: 334 IEDLESKLDEIILRNVPKFEKGISIIKLIASVAPLLGLLGTVVGMIATFQAITLFGTGDP 393
Query: 169 VVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
+ GI E+L++ + GL V++P Y S++ +E + F A + +
Sbjct: 394 KLMAGGISEALVTTMQGLVVAVPMLFLYTIVQTQSRRLIQVLEEQSAGFVARYQERLHAS 453
Query: 229 IS 230
+
Sbjct: 454 KA 455
>gi|330900152|gb|EGH31571.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. japonica
str. M301072PT]
Length = 238
Score = 97.6 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 46/220 (20%), Positives = 87/220 (39%), Gaps = 19/220 (8%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS--GQS 68
I+++ L G + + + SI + +II++ R W +
Sbjct: 12 ITVWELVKSGGWM----MLPIILSSIAAAGIIIERLWTLRASRITPPHLLGQVWQWIQEK 67
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
K + + L I + ++ + + + ++ A AR + E+
Sbjct: 68 KLDGEKLKQLRADSPLGEILAAGLANSRHGR-----------EIMKECIEEAAARVIHEL 116
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGL 186
LS LGS+++ L+G+LG VLGM+ F S +G +N V GI ++LI GL
Sbjct: 117 ERYLSALGSIAAMAPLLGLLGTVLGMIDIFGSFNSSGATANAGVLAGGISKALICTASGL 176
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
V+IP+ + + + ME A ++ +
Sbjct: 177 IVAIPAIFFHRFLQSRVDELVVGMEQQAIRLVEVVQGDRD 216
>gi|296125586|ref|YP_003632838.1| MotA/TolQ/ExbB proton channel [Brachyspira murdochii DSM 12563]
gi|296017402|gb|ADG70639.1| MotA/TolQ/ExbB proton channel [Brachyspira murdochii DSM 12563]
Length = 209
Score = 97.6 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 46/199 (23%), Positives = 82/199 (41%), Gaps = 18/199 (9%)
Query: 29 TLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLET--VCKSLKNHHNIGLAA 86
L I S+L+ ++I+ + + F ++ + S + +L L+
Sbjct: 20 IGLLISSVLALTIIVDRFIYFTRIKSEDNSLAPKLISLVKEKEIKAAIALCEASKSPLSN 79
Query: 87 IFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVG 146
I MS + + M A +EL + +S L ++S+ L+G
Sbjct: 80 IIMSGLKNINAPKEF---------------MQSASNKELPRLERFISALSTISTIAPLLG 124
Query: 147 ILGAVLGMMGFFQSIAGYYSN-NVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKK 205
+LG +LGM+ F I+ S GI +L++ GL ++IP+ I YN F+
Sbjct: 125 LLGTILGMIQSFAVISVVGSGKPTALASGIANALLTTAAGLIIAIPAVIFYNYFVNTINA 184
Query: 206 FAMQMEGFANEFSAILSRQ 224
+ ME +NE S + Q
Sbjct: 185 RILFMENLSNEISDYIISQ 203
>gi|163803222|ref|ZP_02197103.1| biopolymer transport protein ExbB-related protein [Vibrio sp. AND4]
gi|159172977|gb|EDP57813.1| biopolymer transport protein ExbB-related protein [Vibrio sp. AND4]
Length = 455
Score = 97.6 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 37/203 (18%), Positives = 80/203 (39%), Gaps = 28/203 (13%)
Query: 18 MQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLK 77
+ G V II L + + + + V+ + R++ + K+L
Sbjct: 258 LNAGGVVGKIILGLLA---IGLIIALVRGVSLVIARQK-------------ITKQLKNLN 301
Query: 78 NHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGS 137
+ L + + +S + ++ + A+ E + + LS L
Sbjct: 302 QPEDNPLGRVLAVYQKDKHRSV-----------EALELRLLEAVVDEQTHLEKGLSMLKL 350
Query: 138 MSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-VVSIPGIIESLISILLGLCVSIPSSIAY 196
+++ ++G+LG V GM+ FQ I + + + V GI +L++ +LGL ++P +A+
Sbjct: 351 LAALAPMLGLLGTVTGMIETFQVITQFGNGDPKVMAGGISMALVTTVLGLVAAMPLLLAH 410
Query: 197 NKFIEDSKKFAMQMEGFANEFSA 219
N ++ +E A
Sbjct: 411 NVLSSQAENIRNILEKQGIGLVA 433
>gi|5531413|emb|CAB50918.1| hypothetical protein [Pseudomonas stutzeri]
Length = 199
Score = 97.6 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 39/202 (19%), Positives = 84/202 (41%), Gaps = 14/202 (6%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVC-KSLKN-HHNIGLA 85
+ + + SI + +I+++ R W + + + LK + L
Sbjct: 1 MLPIILCSIAALGIIVERLWTLRPSRVTPPHLLGQVWKWIKDKQLSNQKLKELRADSPLG 60
Query: 86 AIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLV 145
I + ++ K+ + + ++ A AR + ++ L+ LG+++ L+
Sbjct: 61 EILAAGLANSKRGR-----------EIMKECIEEAAARVVHDLERYLNALGTIAGIAPLL 109
Query: 146 GILGAVLGMMGFFQSIAGYY-SNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSK 204
G+LG VLGM+ F + G +N + GI ++LI+ GL V IP+ + +
Sbjct: 110 GLLGTVLGMIEIFSAFMGSGMANAPLLAGGISKALITTAAGLMVGIPALFFHRFLLRRVD 169
Query: 205 KFAMQMEGFANEFSAILSRQTE 226
+ + ME A + ++ +
Sbjct: 170 ELVVGMEQEAIKLVEVVQGDRD 191
>gi|27597189|dbj|BAC55123.1| probable TolR protein [Vibrio parahaemolyticus]
Length = 452
Score = 97.6 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 39/214 (18%), Positives = 88/214 (41%), Gaps = 31/214 (14%)
Query: 18 MQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLK 77
+ G V II +L + + + + V+ R++ + T K+
Sbjct: 255 LNAGGVVGQIILVLLA---IGLIIALVRGVSLFIARQK-------------IATELKNPT 298
Query: 78 NHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGS 137
+ L + ++ +S + ++ + A+ E + + LS L
Sbjct: 299 KAEDNPLGRVLSVYQNDKHRSV-----------EALELRLLEAVVDEQTHLEKGLSMLKL 347
Query: 138 MSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-VVSIPGIIESLISILLGLCVSIPSSIAY 196
+++ ++G+LG V GM+ FQ I + + + V GI +L++ +LGL ++P +A+
Sbjct: 348 LAALAPMLGLLGTVTGMIETFQVITQFGNGDPKVMAGGISMALVTTVLGLVAAMPLLLAH 407
Query: 197 NKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
N ++ +E +++ Q E ++S
Sbjct: 408 NVLSSQAESIRNILEKQG---IGLVAEQAERDMS 438
>gi|293393011|ref|ZP_06637328.1| MotA/TolQ/ExbB proton channel family protein [Serratia odorifera
DSM 4582]
gi|291424545|gb|EFE97757.1| MotA/TolQ/ExbB proton channel family protein [Serratia odorifera
DSM 4582]
Length = 222
Score = 97.6 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 37/195 (18%), Positives = 82/195 (42%), Gaps = 18/195 (9%)
Query: 17 FMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLF----WSGQSLETV 72
M L I +++ +++ +II++++ F +RQ R EQ L
Sbjct: 6 VMNANLLHDIIFYVMYAALVIALVIIIERALYFAYTQRQARRLEQALTPQVRRAGDLPQA 65
Query: 73 CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKL 132
L +++ LA I + E K D ++ + ++D ++ L
Sbjct: 66 ---LTQRNSLPLAVILP--VLEQKHQADD--------RETLGDVIDAQYLLSKPPMSRGL 112
Query: 133 SFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYY-SNNVVSIPGIIESLISILLGLCVSIP 191
L ++ +A L+G+LG V+G++ F+++A S + G+ +L + LG+ +++
Sbjct: 113 WLLETIVTAAPLLGLLGTVMGIIETFKALAASGVSEPSLVSAGMGTALYATGLGIAIALL 172
Query: 192 SSIAYNKFIEDSKKF 206
+ N ++
Sbjct: 173 CLVGNNYLQSRMERI 187
>gi|289649332|ref|ZP_06480675.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. aesculi
str. 2250]
gi|298486205|ref|ZP_07004268.1| MotA/TolQ/ExbB proton channel family protein [Pseudomonas
savastanoi pv. savastanoi NCPPB 3335]
gi|298159212|gb|EFI00270.1| MotA/TolQ/ExbB proton channel family protein [Pseudomonas
savastanoi pv. savastanoi NCPPB 3335]
Length = 238
Score = 97.6 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 46/220 (20%), Positives = 87/220 (39%), Gaps = 19/220 (8%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS--GQS 68
I+++ L G + + + SI + +II++ R W +
Sbjct: 12 ITVWELVKSGGWM----MLPIILSSIAAAGIIIERLWTLRASRITPPHLLGQVWQWIQEK 67
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
K + + L I + ++ + + + ++ A AR + E+
Sbjct: 68 KLDGEKLKQLRADSPLGEILAAGLANSRHGR-----------EIMKECIEEAAARVIHEL 116
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGL 186
LS LGS+++ L+G+LG VLGM+ F S +G +N V GI ++LI GL
Sbjct: 117 ERYLSALGSIAAMAPLLGLLGTVLGMIDIFGSFNSSGATANAGVLAGGISKALICTASGL 176
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
V+IP+ + + + ME A ++ +
Sbjct: 177 IVAIPAIFFHRFLQSRVDELVVGMEQQAIRLVEVVQGDRD 216
>gi|283778757|ref|YP_003369512.1| MotA/TolQ/ExbB proton channel [Pirellula staleyi DSM 6068]
gi|283437210|gb|ADB15652.1| MotA/TolQ/ExbB proton channel [Pirellula staleyi DSM 6068]
Length = 300
Score = 97.6 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 38/201 (18%), Positives = 81/201 (40%), Gaps = 17/201 (8%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLR---RQFREFEQLFWSGQS 68
S F + G I+ +L S+ + ++ + E +
Sbjct: 71 SFFQILFSGGPVGVIIMLVLIGLSLTAAYLVFDNLMILRRSELIPDGLGEETRALVGSGR 130
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
L + + ++ LA + + ++E G +++ M+ A A + +
Sbjct: 131 LSEAAELCRKRPSL-LAFVMLYGLAE-----------AEGGYSEVEKAMEDATAEQSARL 178
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVS--IPGIIESLISILLGL 186
K+ +L + + +VG+LG V GM+ F+ +A N + GI ++L++ ++GL
Sbjct: 179 FRKVEYLSVVGNIAPMVGLLGTVTGMLLAFKEVADSEGNAGAAQLADGIYQALVTTVVGL 238
Query: 187 CVSIPSSIAYNKFIEDSKKFA 207
++IPS A+ F +F
Sbjct: 239 IIAIPSLGAFAIFRNRVDQFI 259
>gi|300775925|ref|ZP_07085785.1| biopolymer transporter [Chryseobacterium gleum ATCC 35910]
gi|300505475|gb|EFK36613.1| biopolymer transporter [Chryseobacterium gleum ATCC 35910]
Length = 287
Score = 97.6 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 34/216 (15%), Positives = 80/216 (37%), Gaps = 10/216 (4%)
Query: 5 GLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITL--RRQFREFEQL 62
G I S + + G+ V +L F I ++ + F
Sbjct: 65 GKDIHPESFLGIIYKGGVIVP----ILITFMITVIVFSFERYFVLGKAAGKGNLDNFVVQ 120
Query: 63 FWSGQSLETVCKSLK--NHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVA 120
S + + ++++ + + + ++ +K + +++ ++ A
Sbjct: 121 VRSLLNQNKIDEAIEECDRQQGSVGNVVKEGLTTYKALAHDTTLNKEQKMVALNKAIEEA 180
Query: 121 IARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI--PGIIES 178
E+ + + + L ++ + LV +LG V+GM+ F ++ + GI E+
Sbjct: 181 TTLEMPMLEKNMMILSTLGTVATLVALLGTVIGMIKAFFALGSGGGTPDAAALSTGISEA 240
Query: 179 LISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFA 214
LI+ LG+ S + I YN F +++ +
Sbjct: 241 LINTALGIGTSAIAIILYNFFTSKIDGLTYKIDEIS 276
>gi|77164131|ref|YP_342656.1| MotA/TolQ/ExbB proton channel [Nitrosococcus oceani ATCC 19707]
gi|254436272|ref|ZP_05049779.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Nitrosococcus oceani AFC27]
gi|76882445|gb|ABA57126.1| outer membrane transport energization protein ExbB [Nitrosococcus
oceani ATCC 19707]
gi|207089383|gb|EDZ66655.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Nitrosococcus oceani AFC27]
Length = 478
Score = 97.6 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 43/217 (19%), Positives = 88/217 (40%), Gaps = 30/217 (13%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLET 71
S+ Q G I +++ + +Q+ ++ + + R+ ++
Sbjct: 281 SLLERIQQGGWIGYLI----LGLGVIALLIALQRFISLLIIGRR-------------IDR 323
Query: 72 VCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEK 131
+ N L I G R + + + +D AI RE+ I
Sbjct: 324 QRQQKTPSENNPLGRILG---------VYTGGREDV---ETLSLKLDEAILREIPSIERG 371
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-VVSIPGIIESLISILLGLCVSI 190
L L +++ L+G+LG V GM+ FQSI + + + + GI ++L++ LGL V+I
Sbjct: 372 LPVLAILAAIAPLLGLLGTVTGMIETFQSITLFGTGDPKLMSGGISQALVTTELGLAVAI 431
Query: 191 PSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEG 227
P + ++ S + ++ + A L+ + +G
Sbjct: 432 PVLLIHSSLSSKSNRLVQVLDEESAAIVARLAEEKQG 468
>gi|190573628|ref|YP_001971473.1| putative biopolymer transport protein [Stenotrophomonas maltophilia
K279a]
gi|190011550|emb|CAQ45169.1| putative biopolymer transport protein [Stenotrophomonas maltophilia
K279a]
Length = 220
Score = 97.6 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 30/113 (26%), Positives = 58/113 (51%), Gaps = 1/113 (0%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
+D+I ++ + + L+ LG+++SAG L+G+LG V+GM+ F I + +V
Sbjct: 85 RDQIRERIEDTGRHLVHRMERFLNALGTIASAGPLLGLLGTVIGMIQMFLGILDHGVGDV 144
Query: 170 -VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
GI ++L+ G+ V+IP+ + + F + ++ME A+ L
Sbjct: 145 NQLAGGIGKALVCTATGMIVAIPALMFHRYFKGRIHGYVVEMEQEASALLDTL 197
>gi|332292402|ref|YP_004431011.1| MotA/TolQ/ExbB proton channel [Krokinobacter diaphorus 4H-3-7-5]
gi|332170488|gb|AEE19743.1| MotA/TolQ/ExbB proton channel [Krokinobacter diaphorus 4H-3-7-5]
Length = 257
Score = 97.6 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 33/201 (16%), Positives = 79/201 (39%), Gaps = 18/201 (8%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITL----RRQFREFEQLFWSGQSLETVCKSLKNHHNIG 83
+ ++ + IL ++ I++ + ++ ++ E SG K + +
Sbjct: 67 MGIVLLCLILGLAIAIERIIYLNLASTNTKKLAQDVEDALNSGGV--EAAKEVCRNTKGP 124
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
+A+I+ + + + ++ + ++ ++ + +S++ +
Sbjct: 125 VASIYYQGLDRVDEGV-----------EAAEKAVVAYGGVQMGQLEKNVSWISLFIALAP 173
Query: 144 LVGILGAVLGMMGFFQSIAGYYS-NNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIED 202
++G +G V+GM+ F I N + GI +L++ + GL V+I I YN I
Sbjct: 174 MLGFMGTVIGMIQAFDRIEAAGDMNPALVAGGIKVALLTTVFGLIVAIILQIFYNYIIAK 233
Query: 203 SKKFAMQMEGFANEFSAILSR 223
ME + +L R
Sbjct: 234 IDSIVNDMEDASITLMDMLVR 254
>gi|288940746|ref|YP_003442986.1| MotA/TolQ/ExbB proton channel [Allochromatium vinosum DSM 180]
gi|288896118|gb|ADC61954.1| MotA/TolQ/ExbB proton channel [Allochromatium vinosum DSM 180]
Length = 209
Score = 97.6 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 42/219 (19%), Positives = 86/219 (39%), Gaps = 18/219 (8%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
+ L G + + S+L+ +++I+++ R + W + +
Sbjct: 1 MLELMYAGGWL----MVPILACSVLATAIVIERAWTLRRSRIMPERLVERIWRLHQEQRL 56
Query: 73 --CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
+ L I + + + S + + ++ A + ++
Sbjct: 57 NAVAIAQIREGSPLGRILAAGLVNRQHSH-----------EVMKDAINDAGRHVVAQLER 105
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVS 189
L+ LG++++ L+G+LG VLGM+ F I N V GI ++LI+ GL V+
Sbjct: 106 FLNTLGTIAAIAPLLGLLGTVLGMIDVFGVIMEAGVGNAGVLAGGISKALITTAAGLSVA 165
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
IP+ + + F + A+ ME A +L + E
Sbjct: 166 IPALMFHRFFDSKVGRIALDMEEQALRLVEVLQGEREAT 204
>gi|284039931|ref|YP_003389861.1| MotA/TolQ/ExbB proton channel [Spirosoma linguale DSM 74]
gi|283819224|gb|ADB41062.1| MotA/TolQ/ExbB proton channel [Spirosoma linguale DSM 74]
Length = 277
Score = 97.2 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 26/174 (14%), Positives = 72/174 (41%), Gaps = 5/174 (2%)
Query: 43 IQKSVNFITLRRQ--FREFEQLFWSGQSLETVCKSLK--NHHNIGLAAIFMSAMSEWKKS 98
I++ + +F + V +++ + + + +A+ ++++
Sbjct: 90 IERFITIGRANGSGSIDDFVRKIKGQLDRNEVAAAIQECDRQKGSIGNVVKTALIKYQQL 149
Query: 99 CDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFF 158
+ + ++ A EL + + L+ + +++S L+ +LG VLGM+ F
Sbjct: 150 ATDTQLDKEQKLVALQKEVEEATTLELPMLEKNLTIIATLASVSTLIALLGTVLGMIRAF 209
Query: 159 QSIAGYYSNNVVSIP-GIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
++ + ++ GI E+L++ LG+ + ++I Y+ F ++
Sbjct: 210 AAMGATGQPDTGALSTGISEALVNTALGIGTAAIATIMYSYFTSRIDVLTYNID 263
>gi|153834893|ref|ZP_01987560.1| TolR [Vibrio harveyi HY01]
gi|148868664|gb|EDL67746.1| TolR [Vibrio harveyi HY01]
Length = 455
Score = 97.2 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 37/203 (18%), Positives = 79/203 (38%), Gaps = 28/203 (13%)
Query: 18 MQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLK 77
+ G V II L + + + + V+ + R++ + K+
Sbjct: 258 LNAGGVVGKIILGLLA---IGLIIALVRGVSLMIARQK-------------IAKQLKNPA 301
Query: 78 NHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGS 137
+ L I + +S + ++ + A+ E + + LS L
Sbjct: 302 QPEDNPLGRILAVYQKDKHRSV-----------EALELRLLEAVVDEQTHLEKGLSMLKL 350
Query: 138 MSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-VVSIPGIIESLISILLGLCVSIPSSIAY 196
+++ ++G+LG V GM+ FQ I + + + V GI +L++ +LGL ++P +A+
Sbjct: 351 LAALAPMLGLLGTVTGMIETFQVITQFGNGDPKVMAGGISMALVTTVLGLVAAMPLLLAH 410
Query: 197 NKFIEDSKKFAMQMEGFANEFSA 219
N ++ +E A
Sbjct: 411 NVLSSQAENIRNILEKQGIGLVA 433
>gi|255533971|ref|YP_003094343.1| MotA/TolQ/ExbB proton channel [Pedobacter heparinus DSM 2366]
gi|255346955|gb|ACU06281.1| MotA/TolQ/ExbB proton channel [Pedobacter heparinus DSM 2366]
Length = 280
Score = 97.2 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 35/206 (16%), Positives = 80/206 (38%), Gaps = 11/206 (5%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITL--RRQFREFE---QLFWSG 66
+ + + G+ V +L ++ I++ + + F Q +
Sbjct: 65 NYMGMAYKGGVIVP----ILLGMFLMVIVFSIERMIVISKATGKSGLDSFVKKIQALLNS 120
Query: 67 QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
++E +A + S + ++++ + I + ++ A E+
Sbjct: 121 NNIEAAIAECDKQEGS-VANVIKSGLRKYREMEVEPNMDTDQKCLAIQKDIEEATTLEMP 179
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISILLG 185
+ + L+ + ++ S G L G+LG V GM+ F +A + + ++ GI E+LI+ G
Sbjct: 180 MLEQNLTVIATLVSVGTLTGLLGTVTGMIKAFGGLANSGAPDQAALATGISEALINTATG 239
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQME 211
+ S + I YN K ++
Sbjct: 240 IGTSTFAIIMYNILTSKIDKLTYAID 265
>gi|330830957|ref|YP_004393909.1| TolQ proton channel protein [Aeromonas veronii B565]
gi|328806093|gb|AEB51292.1| TolQ proton channel protein [Aeromonas veronii B565]
Length = 457
Score = 97.2 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 28/122 (22%), Positives = 61/122 (50%), Gaps = 1/122 (0%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN- 168
+ ++ +D I R + + + +S + ++S L+G+LG V+GM+ FQ+I + + +
Sbjct: 334 IEDLESKLDEIILRNVPKFEKGISLIKLIASVAPLLGLLGTVVGMIATFQAITLFGTGDP 393
Query: 169 VVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
+ GI E+L++ + GL V++P Y S++ +E + F A + +
Sbjct: 394 KLMAGGISEALVTTMQGLVVAVPMLFLYTIVQTQSRRLIQVLEEQSAGFVARYQERLHAS 453
Query: 229 IS 230
+
Sbjct: 454 KA 455
>gi|171910746|ref|ZP_02926216.1| MotA/TolQ/ExbB proton channel family protein [Verrucomicrobium
spinosum DSM 4136]
Length = 212
Score = 97.2 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 40/213 (18%), Positives = 88/213 (41%), Gaps = 21/213 (9%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQK-SVNFITLR-RQFREFEQLFWSGQSLE 70
+ LF G I+ + + + + ++I ++ + R+ ++ E++ S +S +
Sbjct: 10 LVDLFRHGGP----IMWPIGVVTFAAIAIIFERCWWWLTHAKNRKPQDLERVLMSLESGD 65
Query: 71 TV-CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+ L + + + + + +S S ++ GI+ + +
Sbjct: 66 LGHAQKLSANSSDPVLRVVHAGLSHRHASLQGALQAAAGIE--------------IRQAG 111
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVS 189
L+ + ++ + L+G+LG V G+MG F ++ G GI E+LI+ GL ++
Sbjct: 112 RFLTAMDTIITLAPLLGLLGTVTGIMGSFSAVGGAELAVEKVTGGIGEALIATAFGLGIA 171
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
I + I YN F +E AN ++
Sbjct: 172 IATLIPYNWFHSKVAGLQHDIETAANNVEVFVA 204
>gi|298527875|ref|ZP_07015279.1| MotA/TolQ/ExbB proton channel [Desulfonatronospira thiodismutans
ASO3-1]
gi|298511527|gb|EFI35429.1| MotA/TolQ/ExbB proton channel [Desulfonatronospira thiodismutans
ASO3-1]
Length = 209
Score = 97.2 bits (241), Expect = 2e-18, Method: Composition-based stats.
Identities = 39/208 (18%), Positives = 84/208 (40%), Gaps = 23/208 (11%)
Query: 27 IITLLFIFSILSWSVIIQK--SVNFITLRRQ---FREFEQLFWSGQSLETVCKSLKNHHN 81
++ L SI++ +V I++ + +RR E L+ + E++ + + +
Sbjct: 11 VMYPLLACSIIALTVTIERVIFWTLVHVRRDPALVDEVLDLYRL-EDWESIKQKVSGSRD 69
Query: 82 IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSA 141
+ + +S + S + + M+ A E++ + L +M +
Sbjct: 70 F-VIRVLVSGILHRDFS--------------MGKAMESAAGEEIKRMQRFNGVLDTMITV 114
Query: 142 GLLVGILGAVLGMMGFFQSIAGYYSN--NVVSIPGIIESLISILLGLCVSIPSSIAYNKF 199
L+GILG V+G++ F + GI ++LI+ GL ++I + + F
Sbjct: 115 APLLGILGTVIGIIHSFDILGQTGGIEEPREVTAGIAQALITTATGLVIAILALFPFKFF 174
Query: 200 IEDSKKFAMQMEGFANEFSAILSRQTEG 227
+ A ME +A + +Q +G
Sbjct: 175 SSRVEDAAAIMERYATSLEIVHEKQQQG 202
>gi|94263160|ref|ZP_01286978.1| MotA/TolQ/ExbB proton channel [delta proteobacterium MLMS-1]
gi|93456531|gb|EAT06645.1| MotA/TolQ/ExbB proton channel [delta proteobacterium MLMS-1]
Length = 473
Score = 97.2 bits (241), Expect = 2e-18, Method: Composition-based stats.
Identities = 36/155 (23%), Positives = 71/155 (45%), Gaps = 12/155 (7%)
Query: 66 GQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
+ ++ +S + + + IF A+ E + ++ MD AI RE+
Sbjct: 313 ARRVDAQLRSDQPRPDNPVGRIF--ALHEANSKLSP---------EALEIRMDEAIHREI 361
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV-SIPGIIESLISILL 184
++ L+ + +++ L+G+LG V+GM+ FQ+I + + + GI ++L++ L
Sbjct: 362 PKLERGLTTIKILAAVAPLLGLLGTVVGMIQTFQAITMFGTGDPQLMAGGISQALVTTAL 421
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
GL V+IP ++ S+ MEG A
Sbjct: 422 GLSVAIPLIFLHSLAAAKSRYLINIMEGQGAGLLA 456
>gi|320325296|gb|EFW81363.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. glycinea
str. B076]
gi|330877774|gb|EGH11923.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. glycinea
str. race 4]
Length = 238
Score = 97.2 bits (241), Expect = 2e-18, Method: Composition-based stats.
Identities = 46/220 (20%), Positives = 87/220 (39%), Gaps = 19/220 (8%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS--GQS 68
I+++ L G + + + SI + +II++ R W +
Sbjct: 12 ITVWELVKSGGWM----MLPIILSSIAAAGIIIERLWTLRASRITPPHLLGQVWQWIQEK 67
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
K + + L I + ++ + + + ++ A AR + E+
Sbjct: 68 KLDGEKLKQLRADSPLGEILAAGLANSRHGR-----------EIMKECIEEAAARVIHEL 116
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGL 186
LS LGS+++ L+G+LG VLGM+ F S +G +N V GI ++LI GL
Sbjct: 117 ERYLSALGSIAAMAPLLGLLGTVLGMIDIFGSFNSSGATANAGVLASGISKALICTASGL 176
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
V+IP+ + + + ME A ++ +
Sbjct: 177 IVAIPAIFFHRFLQSRVDELVVGMEQQAIRLVEVVQGDRD 216
>gi|325526504|gb|EGD04068.1| biopolymer MotA/TolQ/ExbB proton channel family transporter
[Burkholderia sp. TJI49]
Length = 197
Score = 97.2 bits (241), Expect = 2e-18, Method: Composition-based stats.
Identities = 44/209 (21%), Positives = 84/209 (40%), Gaps = 28/209 (13%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
M ++ + F ++ L +I++ ++II + F R + + F
Sbjct: 1 MTMNEWTGFTDALRIGGWVVYPLSALAIVALAIIIDRGYVFWRFARGIHDASRDFPDA-- 58
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
H L AIF ++ K I RI+R ++
Sbjct: 59 ----------HVMRRLGAIFEDGGMPLWRAEAK----IDAIAQRIER-----------DM 93
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV-SIPGIIESLISILLGLC 187
+ L L ++ +A L+G+LG ++GMM F+ I G N G+ ++L++ +GL
Sbjct: 94 SRGLWLLETIVTAAPLLGLLGTIVGMMHSFRLIGGDGLVNPAGVSGGVAQALVATAIGLV 153
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANE 216
+++ + A+N F + +E ANE
Sbjct: 154 IALVALFAFNYFSRRVDRLMDDIELHANE 182
>gi|254439594|ref|ZP_05053088.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Octadecabacter antarcticus 307]
gi|198255040|gb|EDY79354.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Octadecabacter antarcticus 307]
Length = 211
Score = 97.2 bits (241), Expect = 2e-18, Method: Composition-based stats.
Identities = 49/224 (21%), Positives = 91/224 (40%), Gaps = 29/224 (12%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITL----RRQFREFEQLFWSGQS 68
+++++ G V +L S++S SVI+ K F+TL R+ + + GQ
Sbjct: 11 LWSIYDLGGPVV----AILIGLSVVSLSVILWKLWQFMTLGVGQHREIKRAITNWDHGQR 66
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
E L++ + + ++ I G ++ I+ L +
Sbjct: 67 DEAKHTLLQSRNAVAISLI-------------------RGDITAQKSRIEADISAHLARL 107
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGL 186
L S++ L+G+ G VLGM+ FQ++ AG + + GI +L++ GL
Sbjct: 108 ESGFRILDSIAQIAPLLGLFGTVLGMIDAFQALQDAGASVDPSLLAGGIWVALLTTAAGL 167
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
V++P+S+A F E LS + E N++
Sbjct: 168 AVAMPTSLALTYFDSRVAAERTLAETAIEARFTPLSLKPEQNVA 211
>gi|327481328|gb|AEA84638.1| MotA/TolQ/ExbB proton channel family protein [Pseudomonas stutzeri
DSM 4166]
Length = 210
Score = 97.2 bits (241), Expect = 2e-18, Method: Composition-based stats.
Identities = 43/217 (19%), Positives = 87/217 (40%), Gaps = 18/217 (8%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
++ L G I+ + + SI + +I ++ R W + +
Sbjct: 1 MWELVKAGGW----IMLPIILCSIAAAGIIAERLWTLRPSRVTPPHLLGQVWKWIKDKKL 56
Query: 73 C-KSLKN-HHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
+ LK + L I + +S K+ + + ++ A AR + ++
Sbjct: 57 SNQKLKELRADSPLGEILAAGLSSSKRGR-----------EIMKECIEEAAARVVHDLER 105
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYY-SNNVVSIPGIIESLISILLGLCVS 189
L+ LG+++ L+G+LG VLGM+ F + G +N + GI ++LI+ GL V
Sbjct: 106 YLNALGTIAGIAPLLGLLGTVLGMIEIFSAFMGSGMANAPLLAGGIAKALITTAAGLMVG 165
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
IP+ + + + ME A + ++ +
Sbjct: 166 IPALFFHRFLQRRVDELVVGMEQEAIKLVEVVQGDRD 202
>gi|163786595|ref|ZP_02181043.1| MotA/TolQ/ExbB proton channel family protein [Flavobacteriales
bacterium ALC-1]
gi|159878455|gb|EDP72511.1| MotA/TolQ/ExbB proton channel family protein [Flavobacteriales
bacterium ALC-1]
Length = 256
Score = 97.2 bits (241), Expect = 2e-18, Method: Composition-based stats.
Identities = 34/204 (16%), Positives = 78/204 (38%), Gaps = 18/204 (8%)
Query: 28 ITLLFIFSILSWSVIIQKSVNF----ITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIG 83
+ ++ + IL ++ I++ + ++ + E SG K + +
Sbjct: 66 MGIVLLCLILGLAIAIERIIFLNLSTTNTKKLTQNVEDALSSGGI--EAAKEVCRNTKGP 123
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
+A+IF + + D ++ + ++ ++ + +S++ +
Sbjct: 124 VASIFYQGLDRADED-----------IDAAEKAVVAYGGVQMGQLEKNVSWISLFIALAP 172
Query: 144 LVGILGAVLGMMGFFQSIAGYYS-NNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIED 202
++G +G V+GM+ F I + GI +L++ + GL V+I I YN I
Sbjct: 173 MLGFMGTVIGMIQAFDKIEAAGDMQPSLVAGGIKVALLTTVFGLIVAIILQIFYNYIIAK 232
Query: 203 SKKFAMQMEGFANEFSAILSRQTE 226
ME + +L R +
Sbjct: 233 IDSIVNDMEDASITLMDLLVRHKK 256
>gi|90581004|ref|ZP_01236805.1| TolR [Vibrio angustum S14]
gi|90437882|gb|EAS63072.1| TolR [Vibrio angustum S14]
Length = 453
Score = 97.2 bits (241), Expect = 2e-18, Method: Composition-based stats.
Identities = 31/117 (26%), Positives = 57/117 (48%), Gaps = 1/117 (0%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-V 169
+ ++ +D I R I + + +S L+G+LG V+GM+G FQ+I + + +
Sbjct: 333 EDLEAKLDEIILRNAPRIERFVGSIKLFASVAPLLGLLGTVMGMIGTFQAITLFGTGDPK 392
Query: 170 VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+ GI E+L++ +LGL V+IP Y S++ +E + F A +
Sbjct: 393 LMAGGISEALVTTMLGLVVAIPLLFLYTLVHSKSRRLIQTLEEQSAGFIARYQEKLH 449
>gi|254491608|ref|ZP_05104787.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Methylophaga thiooxidans DMS010]
gi|224463086|gb|EEF79356.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Methylophaga thiooxydans DMS010]
Length = 451
Score = 97.2 bits (241), Expect = 2e-18, Method: Composition-based stats.
Identities = 38/170 (22%), Positives = 76/170 (44%), Gaps = 15/170 (8%)
Query: 58 EFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMM 117
+F L +G+ + K + N L I ++ + + + +
Sbjct: 289 QFLSLLRAGRGVAKQQKQDEASQNNPLGRILSVYNAKLAQDV-----------ETLSLKL 337
Query: 118 DVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-VVSIPGII 176
D AI RE + L L +++ ++G+LG V GM+ FQ+I + + + + GI
Sbjct: 338 DEAILRETPRLERGLITLAILAAIAPMLGLLGTVSGMIETFQAITLFGTGDPKLMSGGIS 397
Query: 177 ESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
++L++ LGL V+IP + ++ S + ++ E +AI++R E
Sbjct: 398 QALVTTELGLAVAIPLLLIHSGLSSKSNRLIQILD---EESAAIVARNAE 444
>gi|319940522|ref|ZP_08014866.1| hypothetical protein HMPREF9464_00085 [Sutterella wadsworthensis
3_1_45B]
gi|319806050|gb|EFW02804.1| hypothetical protein HMPREF9464_00085 [Sutterella wadsworthensis
3_1_45B]
Length = 201
Score = 97.2 bits (241), Expect = 2e-18, Method: Composition-based stats.
Identities = 36/214 (16%), Positives = 87/214 (40%), Gaps = 18/214 (8%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE-- 70
+F+ G + L SI++ ++ ++++V + + + F S +
Sbjct: 4 FIQIFLTGGFM----MWPLLAASIVTIAIAVERTVFYRRSASDMQVLQGEFLSAVRAKNF 59
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
+L + A+ A++E + ++ + A A + +
Sbjct: 60 DAAAALCKKAGGTVGAVLEKAIAERNAVINA------------EQYLSGAAAYSAARLKD 107
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSI 190
L+++ ++ + L+G+LG V GM+ F ++ G+ E+L++ GL V+I
Sbjct: 108 HLNYVSAIVTLAPLMGLLGTVTGMIRSFDILSISEGQPFAITGGVAEALVATGFGLLVAI 167
Query: 191 PSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+ + Y + + + +E A+ + A LS +
Sbjct: 168 IAMLVYVWLSQRANRIIEDLEAAASAYLACLSEK 201
>gi|156312541|ref|XP_001617847.1| hypothetical protein NEMVEDRAFT_v1g225742 [Nematostella vectensis]
gi|156196113|gb|EDO25747.1| predicted protein [Nematostella vectensis]
Length = 278
Score = 97.2 bits (241), Expect = 2e-18, Method: Composition-based stats.
Identities = 36/207 (17%), Positives = 87/207 (42%), Gaps = 13/207 (6%)
Query: 12 SIFALFMQMGLAVKCII-TLLFIFSILSWSVIIQKSVNFITLRRQFR--EFEQLFW---S 65
++ Q G V ++ T L + +I++ + + + EF + +
Sbjct: 63 NLMGTMYQGGWVVPILMSTFLVLL-----YFVIERGLTVFKAKGKVNGGEFVRRVQYHLA 117
Query: 66 GQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
++++ + + + ++++++ I + ++ A A EL
Sbjct: 118 NKNIDAAKAECDKQAGS-VGNVMRNGLNKYEEMIGDTELETEQKIASIQKEIEEATALEL 176
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVS-IPGIIESLISILL 184
+ + + F+ +++S L+G+ G VLGM+ F ++A + + + GI E+LI+ L
Sbjct: 177 PILEKNMVFISTIASVATLIGLFGTVLGMIRAFSAMAEAGAPDGAALAAGISEALINTAL 236
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQME 211
G+ S + IAYN + ++
Sbjct: 237 GIGTSAIAIIAYNFYTTIIDNITFGID 263
>gi|312890403|ref|ZP_07749940.1| outer membrane transport energization protein ExbB (TC 2.C.1.1.1)
[Mucilaginibacter paludis DSM 18603]
gi|311297173|gb|EFQ74305.1| outer membrane transport energization protein ExbB (TC 2.C.1.1.1)
[Mucilaginibacter paludis DSM 18603]
Length = 277
Score = 97.2 bits (241), Expect = 2e-18, Method: Composition-based stats.
Identities = 43/205 (20%), Positives = 91/205 (44%), Gaps = 11/205 (5%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRR--QFREFE---QLFWSGQ 67
+F L + G V I++ L + ++++S+ ++ V F Q F +
Sbjct: 59 VFGLVHKGGFIVPIILSCLLM--VITFSI--ERLVVIGKASGTGSVDSFVKKVQSFLNAG 114
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+++ +A + S + ++++ + A I + ++ A + E+
Sbjct: 115 NIDAASAECDKQKGS-VANVIKSGLKKYREMELEPALDVDQKTLAIQKDIEEATSLEMPM 173
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV-SIPGIIESLISILLGL 186
+ + L+ + ++ S G L+G+LG VLGM+G F+++ + N I E+LI+ LG+
Sbjct: 174 LEQNLTIIATLVSLGTLMGLLGTVLGMIGAFRTMGAAGAPNASELSSHISEALINTFLGI 233
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQME 211
S S + YN F K ++
Sbjct: 234 STSAISIVMYNIFTSKIDKLTYAID 258
>gi|187735732|ref|YP_001877844.1| MotA/TolQ/ExbB proton channel [Akkermansia muciniphila ATCC
BAA-835]
gi|187425784|gb|ACD05063.1| MotA/TolQ/ExbB proton channel [Akkermansia muciniphila ATCC
BAA-835]
Length = 263
Score = 97.2 bits (241), Expect = 2e-18, Method: Composition-based stats.
Identities = 49/245 (20%), Positives = 96/245 (39%), Gaps = 32/245 (13%)
Query: 1 MNNYGL----AIMDI-------SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNF 49
MN A MD + LFM+ G I+ L + SI V++ +
Sbjct: 1 MNPVPFTTLAAAMDFVVGDRNYPLSELFMKGGF----IMWPLLLLSIAGVVVLV---MCC 53
Query: 50 ITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKS----CDKGARS 105
+ R +L +S ++ GL+ + + S + + + R+
Sbjct: 54 FSTRASAVLPTKLVEQAESF------IRKRDYTGLSILCKNGDSCYARVMLTVANFMLRN 107
Query: 106 PIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGY- 164
P + + + R+ ++ ++S+L + + ++G+LG V+GMM F IA
Sbjct: 108 PSAQFEEVREIASAEGGRQAGFLSRQISWLSDIGAVAPMLGLLGTVVGMMKTFFEIANGD 167
Query: 165 ---YSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+ G+ E+LI+ GL + IP+ +AY F K +E +++
Sbjct: 168 FSGGKQRIDMAGGVAEALITTAGGLMLGIPAILAYVYFRSRVHKRVGDLEAAVTHSVSVV 227
Query: 222 SRQTE 226
+ Q +
Sbjct: 228 ATQLQ 232
>gi|300115031|ref|YP_003761606.1| MotA/TolQ/ExbB proton channel [Nitrosococcus watsonii C-113]
gi|299540968|gb|ADJ29285.1| MotA/TolQ/ExbB proton channel [Nitrosococcus watsonii C-113]
Length = 481
Score = 96.8 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 44/217 (20%), Positives = 89/217 (41%), Gaps = 30/217 (13%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLET 71
S+ Q G I+ L I + + +Q+ + + + R+ ++
Sbjct: 281 SLLERIQQGGWIGYLILGLGAIALL----IALQRFIFLLIIGRR-------------IDR 323
Query: 72 VCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEK 131
+ N L I + G R + + + +D AI +E+ I
Sbjct: 324 QRQQKTPSENNPLGRILGAY---------TGGREDV---ETLSLKLDEAILKEIPSIERG 371
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-VVSIPGIIESLISILLGLCVSI 190
L L +++ L+G+LG V GM+ FQSI + + + + GI ++L++ LGL V+I
Sbjct: 372 LPTLAILAAIAPLLGLLGTVTGMIETFQSITLFGTGDPKLMSGGISQALVTTELGLAVAI 431
Query: 191 PSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEG 227
P + ++ S + ++ + A L+ + +G
Sbjct: 432 PVLLIHSSLSSKSNRLVQVLDEESAAIVARLAEEKQG 468
>gi|254522202|ref|ZP_05134257.1| biopolymer transport protein [Stenotrophomonas sp. SKA14]
gi|219719793|gb|EED38318.1| biopolymer transport protein [Stenotrophomonas sp. SKA14]
Length = 220
Score = 96.8 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 30/113 (26%), Positives = 58/113 (51%), Gaps = 1/113 (0%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
+D+I ++ + + L+ LG+++SAG L+G+LG V+GM+ F I + +V
Sbjct: 85 RDQIRERIEDTGRHLVHRMERFLNALGTIASAGPLLGLLGTVIGMIQMFLGILDHGVGDV 144
Query: 170 -VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
GI ++L+ G+ V+IP+ + + F + ++ME A+ L
Sbjct: 145 NQLAGGIGKALVCTATGMIVAIPALMFHRYFKGRIHGYVVEMEQEASALLDTL 197
>gi|292493724|ref|YP_003529163.1| MotA/TolQ/ExbB proton channel [Nitrosococcus halophilus Nc4]
gi|291582319|gb|ADE16776.1| MotA/TolQ/ExbB proton channel [Nitrosococcus halophilus Nc4]
Length = 477
Score = 96.8 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 32/117 (27%), Positives = 63/117 (53%), Gaps = 4/117 (3%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-V 169
+ + +D AI +E+ + L L +++ L+G+LG V GM+ FQSI + + +
Sbjct: 351 ETLHLKLDEAILKEIPRLERGLPTLAILAAIPPLLGLLGTVTGMIETFQSITLFGTGDPK 410
Query: 170 VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+ GI E+L++ LGL V+IP + ++ S + ++ E +AI++++ E
Sbjct: 411 LMSGGISEALVTTELGLSVAIPILLIHSGLSSKSNRLVQVLD---EESAAIVAQRAE 464
>gi|90577869|ref|ZP_01233680.1| putative biopolymer transport protein ExbB-related protein [Vibrio
angustum S14]
gi|90440955|gb|EAS66135.1| putative biopolymer transport protein ExbB-related protein [Vibrio
angustum S14]
Length = 455
Score = 96.8 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 46/213 (21%), Positives = 88/213 (41%), Gaps = 32/213 (15%)
Query: 19 QMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKN 78
G+ K I+ LL I + + I + V + RQ + K+
Sbjct: 260 AGGVVGKIILLLLAIGA----GIAIFRGVKLAIINRQIK-------------QQLKNPTQ 302
Query: 79 HHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSM 138
N L I E +S + ++ + AI E + + + LS L
Sbjct: 303 AGNNPLGRILAVYNKEQNRSV-----------EALELRLLEAIVDEQQGLEKGLSMLKLF 351
Query: 139 SSAGLLVGILGAVLGMMGFFQSIAGYYSNN-VVSIPGIIESLISILLGLCVSIPSSIAYN 197
++ ++G+LG V GM+ FQ I + + + V GI +L++ +LGL ++P +A+N
Sbjct: 352 AALAPMLGLLGTVTGMIETFQVITQFGNGDPKVMAGGISMALVTTVLGLIAAMPLLLAHN 411
Query: 198 KFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
++ + +E +++++Q E N S
Sbjct: 412 VLSTQAENIRLILEKQG---ISLVAQQAEKNES 441
>gi|296135462|ref|YP_003642704.1| MotA/TolQ/ExbB proton channel [Thiomonas intermedia K12]
gi|295795584|gb|ADG30374.1| MotA/TolQ/ExbB proton channel [Thiomonas intermedia K12]
Length = 238
Score = 96.8 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 30/206 (14%), Positives = 78/206 (37%), Gaps = 15/206 (7%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ- 67
M + Q + I+ LL ++ +V +++ + + + S
Sbjct: 1 MSLDTLTHLAQTSGGILYIMALLLF---IALAVSVERFWAISRMLASAKGWILELKSHAH 57
Query: 68 -SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
++ + +++ + A + A+ D ++ A+ +
Sbjct: 58 VDVKQLKAKVEDDADSPAAQVVAVALQ----------HDLADPLDHFTDRLEEAVMDQAP 107
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGL 186
I L L ++ + L+G+LG ++GM F +++ + G+ E+L++ GL
Sbjct: 108 RIDRGLWMLDTIVTLAPLLGLLGTIIGMFNTFSALSNPGAATQAVTGGVGEALLATAAGL 167
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEG 212
+++ +A+N + + Q+E
Sbjct: 168 FIAVLGLVAFNALNQRVRLVMHQLER 193
>gi|86131606|ref|ZP_01050204.1| biopolymer transport protein [Dokdonia donghaensis MED134]
gi|85818051|gb|EAQ39219.1| biopolymer transport protein [Dokdonia donghaensis MED134]
Length = 264
Score = 96.8 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 35/201 (17%), Positives = 79/201 (39%), Gaps = 18/201 (8%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITL----RRQFREFEQLFWSGQSLETVCKSLKNHHNIG 83
+ ++ + IL ++ I++ + ++ +E E SG K + +
Sbjct: 74 MGIVLLCLILGLAIAIERIIYLNLASTNTKKLQQEVEDALNSGGV--EAAKEVCRNTKGP 131
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
+A+I+ + + D ++ + ++ ++ + +S++ +
Sbjct: 132 VASIYYQGLDRVDEGLDSA-----------EKAVVAYGGVQMGQLEKNVSWVSLFIALAP 180
Query: 144 LVGILGAVLGMMGFFQSIAGYYS-NNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIED 202
++G +G V+GM+ F I N + GI +L++ + GL V+I I YN I
Sbjct: 181 MLGFMGTVIGMIQAFDRIEAAGDMNPALVAGGIKVALLTTVFGLIVAIILQIFYNYIIAK 240
Query: 203 SKKFAMQMEGFANEFSAILSR 223
ME + +L R
Sbjct: 241 IDSIVNDMEDASITLMDMLVR 261
>gi|124010639|ref|ZP_01695241.1| MotA/TolQ/ExbB proton channel family protein [Microscilla marina
ATCC 23134]
gi|123982152|gb|EAY23787.1| MotA/TolQ/ExbB proton channel family protein [Microscilla marina
ATCC 23134]
Length = 278
Score = 96.8 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 37/199 (18%), Positives = 82/199 (41%), Gaps = 18/199 (9%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITL----RRQFREFEQLFWSGQSLETVCKSLKNHHNIG 83
++ + I IL +V ++K ++ ++ ++ E SG K + +
Sbjct: 84 MSTVLICLILGLAVALEKIISLSLATTNTKKLVKKVEDALNSGGV--EKAKEVTRNTRGP 141
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
+A+IF + + D +++ + + E+ ++ + +S++ +
Sbjct: 142 VASIFTQGLMRISEG-----------IDMVEKSVISYGSVEMGKLEKGISWISLFIALAP 190
Query: 144 LVGILGAVLGMMGFFQSIAGYYS-NNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIED 202
++G +G V+GM+ F I + + GI +LI+ + GL V+I I YN +
Sbjct: 191 MLGFMGTVIGMIDAFDQIQAAGDVSPQIVAGGIKVALITTVSGLIVAIILQIFYNYIVSK 250
Query: 203 SKKFAMQMEGFANEFSAIL 221
QME + +L
Sbjct: 251 VDSIVNQMEEASIALIDVL 269
>gi|269797127|ref|YP_003311027.1| MotA/TolQ/ExbB proton channel [Veillonella parvula DSM 2008]
gi|282849482|ref|ZP_06258867.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Veillonella parvula ATCC 17745]
gi|269093756|gb|ACZ23747.1| MotA/TolQ/ExbB proton channel [Veillonella parvula DSM 2008]
gi|282581186|gb|EFB86584.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Veillonella parvula ATCC 17745]
Length = 203
Score = 96.8 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 37/202 (18%), Positives = 87/202 (43%), Gaps = 20/202 (9%)
Query: 14 FALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS---LE 70
LF G ++ L +F + + +++ ++ + + + ++ +G++
Sbjct: 5 IHLFNAGGF----VMYPLVLFMLAACTILFERIRTYRNINHELQQLSDSIDAGRNSNNWS 60
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
T+ S+KN + L+ F+S + E S + ++ + + E +
Sbjct: 61 TLENSIKNSDD-ALSR-FVSPIVESVYSA-----------EGLENRLHDVVGYMDERLKR 107
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSI 190
L++L M + L+G+LG V+GM+ F ++ G V G+ E+L++ GL V+I
Sbjct: 108 GLNWLSMMVTMAPLLGLLGTVVGMIRSFAAVGGDIGAPTVITGGVSEALVATATGLSVAI 167
Query: 191 PSSIAYNKFIEDSKKFAMQMEG 212
+ ++ + ++E
Sbjct: 168 VALAIHSWCTDKVNSDIAKLEQ 189
>gi|121997257|ref|YP_001002044.1| MotA/TolQ/ExbB proton channel [Halorhodospira halophila SL1]
gi|121588662|gb|ABM61242.1| outer membrane transport energization protein ExbB [Halorhodospira
halophila SL1]
Length = 227
Score = 96.8 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 43/198 (21%), Positives = 84/198 (42%), Gaps = 14/198 (7%)
Query: 27 IITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ---LFWSGQSLETVCKSLKNHHNIG 83
++TLL I S+ + ++I+ K F R R W + + L+ ++G
Sbjct: 29 VLTLLAILSVFTLALILIKLWQFAAARLYDRRTLNDALAAWRAGQAQEALQRLEASKHLG 88
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
+ ++ +G QDR+ + + LE++ L L ++
Sbjct: 89 AEPLAVAM---------RGRLESPDDQDRVREEVTRLASGRLEQLRAYLRGLEAIGVLSP 139
Query: 144 LVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIE 201
L+G+LG VLGM+ F+ + AG + + GI E+L++ GL ++IP+ A
Sbjct: 140 LLGLLGTVLGMIEAFRQLEAAGSQVDPSMLSGGIWEALLTTAAGLALAIPAVAALTWLER 199
Query: 202 DSKKFAMQMEGFANEFSA 219
++F ++E +
Sbjct: 200 IVERFRHRVEDSVTQVFT 217
>gi|218256899|ref|ZP_03474388.1| hypothetical protein PRABACTJOHN_00040 [Parabacteroides johnsonii
DSM 18315]
gi|218225897|gb|EEC98547.1| hypothetical protein PRABACTJOHN_00040 [Parabacteroides johnsonii
DSM 18315]
Length = 130
Score = 96.8 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 28/112 (25%), Positives = 53/112 (47%), Gaps = 2/112 (1%)
Query: 116 MMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI--P 173
++ E+ ++ + + + ++ ++G LG V GM+ F +A +N VS+
Sbjct: 18 AIENVGNLEIAKLEKGFPLIATTAAGAPMLGFLGTVTGMVRAFFDMANAGTNVDVSLLSG 77
Query: 174 GIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
GI E+L++ + GL V I + AYN + +ME EF +L+
Sbjct: 78 GIYEALVTTVGGLVVGIITLFAYNYLVSQVDNVVNKMEARTMEFMDLLNEPA 129
>gi|330502580|ref|YP_004379449.1| MotA/TolQ/ExbB proton channel [Pseudomonas mendocina NK-01]
gi|328916866|gb|AEB57697.1| MotA/TolQ/ExbB proton channel [Pseudomonas mendocina NK-01]
Length = 210
Score = 96.8 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 41/217 (18%), Positives = 86/217 (39%), Gaps = 18/217 (8%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
++ L G + + + SI + ++ ++ R W + +
Sbjct: 1 MWELVKAGGWM----MLPIILCSIAAAGIVAERLWTLRPARVTPANLLAQVWRWIKDKKL 56
Query: 73 C-KSLKN-HHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
+ LK + L I + ++ K + + ++ A AR + ++
Sbjct: 57 NNQKLKELREDSPLGQILAAGLANSKHGR-----------EIMKECIEEAAARVIHDLER 105
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYY-SNNVVSIPGIIESLISILLGLCVS 189
L+ LG+++ L+G+LG VLGM+ F S G +N + GI ++LI+ GL V+
Sbjct: 106 YLNALGTIAGIAPLLGLLGTVLGMIEIFSSFMGSGMANAPMLAGGISKALITTAAGLMVA 165
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
IP+ + + + ME A + ++ +
Sbjct: 166 IPALFFHRYLQRRVDELVVGMEQEAIKLVEMVQGDRD 202
>gi|325107330|ref|YP_004268398.1| MotA/TolQ/ExbB proton channel [Planctomyces brasiliensis DSM 5305]
gi|324967598|gb|ADY58376.1| MotA/TolQ/ExbB proton channel [Planctomyces brasiliensis DSM 5305]
Length = 276
Score = 96.8 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 44/199 (22%), Positives = 76/199 (38%), Gaps = 17/199 (8%)
Query: 33 IFSILSWSVIIQKSVNFITLRRQFREFEQLF----WSGQSLETVCKSLKNHHNIGLAAIF 88
I +I+ ++ V R + F + F G L + +A IF
Sbjct: 76 IATIICLWFSTERLVVLRKARVIPKPFVERFLHHLREGTIEPEEAIELCEENGSPVARIF 135
Query: 89 MSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGIL 148
+ +W K I D +R ++ E+ + L L +++ L+G+L
Sbjct: 136 AHGVRKWGK---PSVEVEQAIIDGGER--------QVSELRKHLRVLNGVATVSPLIGLL 184
Query: 149 GAVLGMMGFFQSIAGYYS--NNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKF 206
G V GM+ F IA + + GI +L++ GL ++IPS I Y +
Sbjct: 185 GTVWGMIEAFNGIASSAAMGSPEKLAAGIALALLTTAAGLMIAIPSLIIYMYLSGRVDRL 244
Query: 207 AMQMEGFANEFSAILSRQT 225
M M+ A E +S +
Sbjct: 245 VMDMDRLAQEVVYSISAEA 263
>gi|325286730|ref|YP_004262520.1| MotA/TolQ/ExbB proton channel [Cellulophaga lytica DSM 7489]
gi|324322184|gb|ADY29649.1| MotA/TolQ/ExbB proton channel [Cellulophaga lytica DSM 7489]
Length = 245
Score = 96.8 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 37/199 (18%), Positives = 79/199 (39%), Gaps = 18/199 (9%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLR----RQFREFEQLFWSGQSLETVCKSLKNHHNIG 83
+ ++ + IL +V I++ + + + E SG K + +
Sbjct: 55 MGIVLLCLILGLAVAIERIIYLNMASTNTTKLKQRVEDALASGGV--EAAKEVCRNTKGP 112
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
+A+IF + +S + ++ + ++ ++ + +S+L +
Sbjct: 113 VASIFYQGLDRAGES-----------IESAEKAVVAYGGVQMGQLEKNVSWLSLFIAIAP 161
Query: 144 LVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIPSSIAYNKFIED 202
++G +G V+GM+ FQ IA + + I G I +L++ + GL +I I YN I
Sbjct: 162 MLGFMGTVIGMIQAFQKIAAVGNLSASLIAGDIQVALLTTVFGLVTAIILQIFYNYIIAK 221
Query: 203 SKKFAMQMEGFANEFSAIL 221
ME + +L
Sbjct: 222 IDSIVNDMEDSSISLIDML 240
>gi|330443984|ref|YP_004376970.1| MotA/TolQ/ExbB proton channel family protein [Chlamydophila pecorum
E58]
gi|328807094|gb|AEB41267.1| MotA/TolQ/ExbB proton channel family protein [Chlamydophila pecorum
E58]
Length = 232
Score = 96.4 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 40/222 (18%), Positives = 85/222 (38%), Gaps = 18/222 (8%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKS---VNFITLRRQFREFEQLFWSGQ-S 68
I + + + K I L + S+ +W+V+ QK F+ + +EF S
Sbjct: 9 IIQAYREADIFGKGIFFSLLLLSLCTWTVLHQKLAIQKKFLKSGKNLKEFLIKNRHAPLS 68
Query: 69 LETVCKSLKNHHNIGLAAIFM---SAMSEW-----KKSCDKGARSPIGIQDRIDRMMDVA 120
L+ A ++ E +++ D+G ++ ++
Sbjct: 69 LDV------TPEPSPFADLYFTIKRGTLELLDKNRQRAPDRGPVLAPEDISSLETLLGAV 122
Query: 121 IARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLI 180
+ + + + + S +G+LG V G++ F I+ + N + + G+ +L
Sbjct: 123 MPKYRALLHKNNFIPATTISLAPFLGLLGTVWGILVAFSQISSGNAGNSMLMEGLATALG 182
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
+ + GL V+IPS I +N S + ++E A +
Sbjct: 183 TTIAGLFVAIPSLIMFNYLKAYSSQLISEIEQTAYLLLNSIE 224
>gi|254442811|ref|ZP_05056287.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Verrucomicrobiae bacterium DG1235]
gi|198257119|gb|EDY81427.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Verrucomicrobiae bacterium DG1235]
Length = 460
Score = 96.4 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 44/216 (20%), Positives = 86/216 (39%), Gaps = 14/216 (6%)
Query: 5 GLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFW 64
+A + S+ + G+ + +L +S + I K I+++
Sbjct: 251 AIASTEESLAEHIFKGGV---WVYPILGFA-FVSLIISIYKLFELISVKSL--------- 297
Query: 65 SGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARE 124
S+ V K L+N + S + G + ++ ++ ++ +
Sbjct: 298 PAGSITKVVKLLRNGEHDAAMHEARSLPGPSGELIAVGVENSEEPKELLEEILLERMIAT 357
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISIL 183
+I LS + ++ L+G+LG V GM+ F+ I + + + S+ GI E+LI+
Sbjct: 358 QPKIERLLSVIAVTAATAPLLGLLGTVTGMINTFKLITIFGTGDAKSLSGGISEALITTE 417
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
GL V+IPS + + +K ME A F
Sbjct: 418 FGLVVAIPSLLFHAFLSRRAKSIMAAMERSAMSFVN 453
>gi|54302899|ref|YP_132892.1| putative biopolymer transport protein ExbB-related protein
[Photobacterium profundum SS9]
gi|46916323|emb|CAG23092.1| putative biopolymer transport protein ExbB-related protein
[Photobacterium profundum SS9]
Length = 454
Score = 96.4 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 38/202 (18%), Positives = 85/202 (42%), Gaps = 19/202 (9%)
Query: 19 QMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKN 78
G+ K I+ LL I +I++ + + +R++ + + N
Sbjct: 261 HGGVVGKVILGLLAIGAIIT----LFRGSKLFIVRQKIKAQLKR----------PNEPGN 306
Query: 79 HHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSM 138
+ + ++ +++ D + + ++ + AI E +E+ + LS L +
Sbjct: 307 NPLGRILNVYSLGVNQ----ADLNIKEQPRSVEALELRLLEAIVDEQQELEKGLSMLKLL 362
Query: 139 SSAGLLVGILGAVLGMMGFFQSIAGYYSNN-VVSIPGIIESLISILLGLCVSIPSSIAYN 197
++ ++G+LG V GM+ FQ I + + + V GI +L++ +LGL ++P +A+N
Sbjct: 363 AALAPMLGLLGTVTGMIETFQVITQFGNGDPKVMAGGISTALVTTVLGLISAMPLLLAHN 422
Query: 198 KFIEDSKKFAMQMEGFANEFSA 219
+ +E A
Sbjct: 423 ILSTQADAVRNILEKQGISLVA 444
>gi|88802049|ref|ZP_01117577.1| MotA/TolQ/ExbB proton channel family protein [Polaribacter irgensii
23-P]
gi|88782707|gb|EAR13884.1| MotA/TolQ/ExbB proton channel family protein [Polaribacter irgensii
23-P]
Length = 240
Score = 96.4 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 39/202 (19%), Positives = 84/202 (41%), Gaps = 24/202 (11%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITL----RRQFREFEQLFWSGQSLETVCKSLKNHHNIG 83
+ ++ + IL ++ I++ + ++ + ++ SG K + +
Sbjct: 50 MGIVLVALILGLAIAIERIIYLNLATTNTKKLVADVDEALSSGGV--EAAKEVCRNTKGP 107
Query: 84 LAAIFMSAMS---EWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSS 140
+A+IF + E +S +K S G+Q + + + +S+L +
Sbjct: 108 VASIFYQGLDRADEGVESAEKAVVSYGGVQMGL--------------LEKNVSWLSLFIA 153
Query: 141 AGLLVGILGAVLGMMGFFQSIAGYYS-NNVVSIPGIIESLISILLGLCVSIPSSIAYNKF 199
++G +G V+GM+G F +IA + V GI +L++ + GL V+I + YN
Sbjct: 154 LAPMLGFMGTVIGMIGAFDAIAQANDISPSVVAVGIKVALLTTVFGLVVAIILQVFYNYI 213
Query: 200 IEDSKKFAMQMEGFANEFSAIL 221
+ ME + + +L
Sbjct: 214 VSKIDSIVNNMEDASIQLIDML 235
>gi|255037139|ref|YP_003087760.1| MotA/TolQ/ExbB proton channel [Dyadobacter fermentans DSM 18053]
gi|254949895|gb|ACT94595.1| MotA/TolQ/ExbB proton channel [Dyadobacter fermentans DSM 18053]
Length = 226
Score = 96.4 bits (239), Expect = 3e-18, Method: Composition-based stats.
Identities = 42/227 (18%), Positives = 97/227 (42%), Gaps = 20/227 (8%)
Query: 6 LAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ---L 62
+A +S+ L + G ++ L + + + +II++ + R +F
Sbjct: 16 VAEQGLSVIDLLAKGGW----VMLPLGLLFLATLFLIIERFLGIGANGRIEPQFVDNVKD 71
Query: 63 FWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIA 122
F +L++ +SL + I A+ R I+D I+ ++ A
Sbjct: 72 FIQQGNLKSA-ESLCRNQRNAAGRILERAI----------GRIGYPIKD-IETTIENASQ 119
Query: 123 RELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLIS 181
E++ + L +LG ++ ++G +G + G++ F I+ N+ +I G+ E +I+
Sbjct: 120 IEIQRMEGNLPYLGVIAGIAPMLGFVGTISGIIRIFYDISISNDFNISTIAGGMYEKMIT 179
Query: 182 ILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
GL + + + Y+ +FA++++ A++F +L +
Sbjct: 180 SGSGLIIGLIAYAGYHLLNMKIDRFALRLQMAASDFLDVLQKPVAAK 226
>gi|118594611|ref|ZP_01551958.1| putative biopolymer transport protein [Methylophilales bacterium
HTCC2181]
gi|118440389|gb|EAV47016.1| putative biopolymer transport protein [Methylophilales bacterium
HTCC2181]
Length = 197
Score = 96.4 bits (239), Expect = 3e-18, Method: Composition-based stats.
Identities = 35/214 (16%), Positives = 81/214 (37%), Gaps = 21/214 (9%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLR----RQFREFEQLFWSGQS 68
++ + G I L S++ +S+II++ + + E G
Sbjct: 1 MWEIIQDAGWP----IWPLIFTSVVGFSIIIERLFSLRSSNIIPENLMSNLELQLKKGVI 56
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ L + L + ++A+ ++ + ++ + A ++
Sbjct: 57 KKE---ELNKMESESLLGLMLAAV----------IKNQGKPLEVMNDAIIKAGDSISYQL 103
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCV 188
+ L L +S+ L+G+ G ++GM+ F S + + GI +L + G+ V
Sbjct: 104 EKYLHILAMISTVAPLLGLFGTIIGMVELFSSFTSDGHDVEMFARGISVALYNTAGGIVV 163
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
+IP+ I++ F ME A+ +++
Sbjct: 164 AIPAMISHRFFRAKIDSQIHIMETNADRLIDLIN 197
>gi|87118917|ref|ZP_01074816.1| biopolymer transport exbB protein [Marinomonas sp. MED121]
gi|86166551|gb|EAQ67817.1| biopolymer transport exbB protein [Marinomonas sp. MED121]
Length = 292
Score = 96.4 bits (239), Expect = 3e-18, Method: Composition-based stats.
Identities = 50/212 (23%), Positives = 94/212 (44%), Gaps = 19/212 (8%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLF---WSGQSL 69
+ G V +L +FS + ++I KS F++LR + + +L W
Sbjct: 69 VIDFLQTGGPVV----WILCLFSAFALTIIFLKSWQFVSLRAESNKDVKLALSHWRKVHP 124
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
E +SLK ++ + AM+E KS +++ I+R+ D +++ +
Sbjct: 125 EQAIESLKTKR--PVSDVVAYAMTELSKS----DYDLALVKEEIERLAD----EKIQALK 174
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGLC 187
L L +++ L+G+LG VLGM+ FQ++ AG + V GI ++L++ +GL
Sbjct: 175 AYLRPLEVVATLSPLLGLLGTVLGMIVAFQNMESAGSQVDPSVLSGGIWQALLTTAVGLA 234
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
V+IP + F ++ M +
Sbjct: 235 VAIPVVAMHALFERKVERIIFLMSDSVTQVFT 266
>gi|225851487|ref|YP_002731721.1| MotA/TolQ/ExbB proton channel family protein [Persephonella marina
EX-H1]
gi|225645187|gb|ACO03373.1| MotA/TolQ/ExbB proton channel family protein [Persephonella marina
EX-H1]
Length = 213
Score = 96.4 bits (239), Expect = 3e-18, Method: Composition-based stats.
Identities = 44/211 (20%), Positives = 90/211 (42%), Gaps = 21/211 (9%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLR----RQFREFEQLFWSGQS 68
+ +F + G + L +L+ + II++S + R ++ E + G+
Sbjct: 4 VIQIFQKGGPL----MYPLLFLGVLAVAFIIERSFSLSFKRCFPVKKIEEIDFYLKEGRV 59
Query: 69 LETV-CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
E + N L A + A + ++S + + + A E+ +
Sbjct: 60 PEALTVAKSSNSVATSLIAGILEAFIKGRRSEND-----------LRLAAEEAARMEIPK 108
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYY-SNNVVSIPGIIESLISILLGL 186
+ ++ +G++++ ++G LG V GM+ F++++ SN + GI ++LI+ GL
Sbjct: 109 LEGYVNAMGAIAAIAPILGFLGTVTGMIQVFEALSLEGLSNPELLSKGISQALITTAFGL 168
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEF 217
++IPS AY F Q+E A E
Sbjct: 169 SIAIPSLAAYWYFKSKVNFLVTQLESLAVEL 199
>gi|302343723|ref|YP_003808252.1| MotA/TolQ/ExbB proton channel [Desulfarculus baarsii DSM 2075]
gi|301640336|gb|ADK85658.1| MotA/TolQ/ExbB proton channel [Desulfarculus baarsii DSM 2075]
Length = 462
Score = 96.4 bits (239), Expect = 3e-18, Method: Composition-based stats.
Identities = 36/188 (19%), Positives = 75/188 (39%), Gaps = 15/188 (7%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQFRE---FEQLFWSGQSLETVCKSLKNHHNIGL 84
+ + +L+ ++ ++ V +R E + S + +
Sbjct: 271 MWPILFVGLLALVLVGERIVFLRRVRANTDEMMSEVAMLVSQGDMAGAFSVAEEQKGRPT 330
Query: 85 AAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLL 144
+ + + ++ Q+ I+ + AI RE + L L ++ L
Sbjct: 331 SNVIKAGLA-----------LVGQPQEVIESGLAEAILRETPRLERFLQVLKVLAGVSPL 379
Query: 145 VGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDS 203
+G+LG V GM+ F I + + + + GI E+L++ GL V+IP IA + + +
Sbjct: 380 LGLLGTVTGMINTFNVITVHGTGDPRLMAGGISEALLTTEFGLIVAIPILIAASLLSQKA 439
Query: 204 KKFAMQME 211
++ A ME
Sbjct: 440 QRLAGDME 447
>gi|294793299|ref|ZP_06758445.1| biopolymer transport protein [Veillonella sp. 6_1_27]
gi|294794670|ref|ZP_06759805.1| biopolymer transport protein [Veillonella sp. 3_1_44]
gi|294454032|gb|EFG22406.1| biopolymer transport protein [Veillonella sp. 3_1_44]
gi|294456244|gb|EFG24608.1| biopolymer transport protein [Veillonella sp. 6_1_27]
Length = 204
Score = 96.4 bits (239), Expect = 3e-18, Method: Composition-based stats.
Identities = 37/202 (18%), Positives = 87/202 (43%), Gaps = 20/202 (9%)
Query: 14 FALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS---LE 70
LF G ++ L +F + + +++ ++ + + + ++ +G++
Sbjct: 6 IHLFNAGGF----VMYPLVLFMLAACTILFERIRTYRNINHELQQLSDSIDAGRNSNNWS 61
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
T+ S+KN + L+ F+S + E S + ++ + + E +
Sbjct: 62 TLENSIKNSDD-ALSR-FVSPIVESVYSA-----------EGLENRLHDVVGYMDERLKR 108
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSI 190
L++L M + L+G+LG V+GM+ F ++ G V G+ E+L++ GL V+I
Sbjct: 109 GLNWLSMMVTMAPLLGLLGTVVGMIRSFAAVGGDIGAPTVITGGVSEALVATATGLSVAI 168
Query: 191 PSSIAYNKFIEDSKKFAMQMEG 212
+ ++ + ++E
Sbjct: 169 VALAIHSWCTDKVNSDIAKLEQ 190
>gi|255534572|ref|YP_003094943.1| MotA/TolQ/ExbB proton channel family protein [Flavobacteriaceae
bacterium 3519-10]
gi|255340768|gb|ACU06881.1| MotA/TolQ/ExbB proton channel family protein [Flavobacteriaceae
bacterium 3519-10]
Length = 287
Score = 96.4 bits (239), Expect = 3e-18, Method: Composition-based stats.
Identities = 35/220 (15%), Positives = 84/220 (38%), Gaps = 15/220 (6%)
Query: 5 GLAIMDISI---FALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQ--FREF 59
GL ++ + G V +L F I+ I++++ F
Sbjct: 62 GLDTKELHPEGFMGIIYMGGPIVP----ILISFMIIVLVFSIERAMVLRKASGAGNVDNF 117
Query: 60 E---QLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRM 116
+ + ++ + + + ++ +K + +++
Sbjct: 118 VLSIRRLLNQNKVDEAIEECDRQQGS-VGNVVREGLTTYKALAHDTTMNKEQKMVALNKS 176
Query: 117 MDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI-AGYYSNNVVSIP-G 174
++ A E+ + + + L ++ + LV +LG V+GM+ F ++ +G + + ++ G
Sbjct: 177 IEEATTLEMPMLEKNMMILSTLGTVATLVALLGTVIGMIKAFNALGSGGGTPDSAALSIG 236
Query: 175 IIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFA 214
I E+LI+ LG+ S + I YN F +++ A
Sbjct: 237 ISEALINTALGIGTSAVAIIFYNYFTSKIDGLTFKIDEIA 276
>gi|28900007|ref|NP_799662.1| biopolymer transport protein ExbB-like protein [Vibrio
parahaemolyticus RIMD 2210633]
gi|153838785|ref|ZP_01991452.1| TolR [Vibrio parahaemolyticus AQ3810]
gi|260362142|ref|ZP_05775137.1| conserved hypothetical protein [Vibrio parahaemolyticus K5030]
gi|260880586|ref|ZP_05892941.1| transporter, MotA/TolQ/ExbB proton channel family [Vibrio
parahaemolyticus AN-5034]
gi|260896327|ref|ZP_05904823.1| protein TtpC [Vibrio parahaemolyticus Peru-466]
gi|260899742|ref|ZP_05908137.1| conserved hypothetical protein [Vibrio parahaemolyticus AQ4037]
gi|28808290|dbj|BAC61495.1| biopolymer transport protein ExbB-related protein [Vibrio
parahaemolyticus RIMD 2210633]
gi|149747765|gb|EDM58659.1| TolR [Vibrio parahaemolyticus AQ3810]
gi|308085149|gb|EFO34844.1| protein TtpC [Vibrio parahaemolyticus Peru-466]
gi|308092502|gb|EFO42197.1| transporter, MotA/TolQ/ExbB proton channel family [Vibrio
parahaemolyticus AN-5034]
gi|308110437|gb|EFO47977.1| conserved hypothetical protein [Vibrio parahaemolyticus AQ4037]
gi|308114662|gb|EFO52202.1| conserved hypothetical protein [Vibrio parahaemolyticus K5030]
gi|328469992|gb|EGF40903.1| biopolymer transport protein ExbB-like protein [Vibrio
parahaemolyticus 10329]
Length = 455
Score = 96.4 bits (239), Expect = 3e-18, Method: Composition-based stats.
Identities = 41/217 (18%), Positives = 88/217 (40%), Gaps = 37/217 (17%)
Query: 18 MQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLK 77
+ G V II +L + + + + V+ R + + K LK
Sbjct: 258 LNAGGVVGQIILVLLA---IGLIIALVRGVSLFIAR----------------QKIAKQLK 298
Query: 78 N---HHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSF 134
N + L + ++ +S + ++ + A+ E + + LS
Sbjct: 299 NPTKAEDNPLGRVLSVYQNDKHRSV-----------EALELRLLEAVVDEQTHLEKGLSM 347
Query: 135 LGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-VVSIPGIIESLISILLGLCVSIPSS 193
L +++ ++G+LG V GM+ FQ I + + + V GI +L++ +LGL ++P
Sbjct: 348 LKLLAALAPMLGLLGTVTGMIETFQVITQFGNGDPKVMAGGISMALVTTVLGLVAAMPLL 407
Query: 194 IAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
+A+N ++ +E +++ Q E ++S
Sbjct: 408 LAHNVLSSQAESIRNILEKQG---IGLVAEQAERDMS 441
>gi|194333431|ref|YP_002015291.1| MotA/TolQ/ExbB proton channel [Prosthecochloris aestuarii DSM 271]
gi|194311249|gb|ACF45644.1| MotA/TolQ/ExbB proton channel [Prosthecochloris aestuarii DSM 271]
Length = 267
Score = 96.4 bits (239), Expect = 3e-18, Method: Composition-based stats.
Identities = 40/208 (19%), Positives = 86/208 (41%), Gaps = 9/208 (4%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITL--RRQFREFEQLFWSGQSL 69
S+F + G V ++ L + I + I+++ + + EF + S
Sbjct: 51 SMFHAVYKGGPVV-SVLMALILMVI---AYIVERIIALNKASGKGNIAEFVKSLKSDVDN 106
Query: 70 ETVCKSLK--NHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ ++ + H LAA+ + +K +++ ++ A E+
Sbjct: 107 GQIDSAISKCDDHQSSLAAVMRAVFERYKMLSIHSVTDREKKISEMEKAVEEATIMEMPL 166
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISILLGL 186
+ + L + +++S +VG+LG +GM+ F ++A + + V + GI E+L + LG+
Sbjct: 167 LEKNLVAISTIASISTMVGLLGTTMGMIRAFTAMATSGAPDAVQLSLGISEALFNTALGI 226
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFA 214
I + YN F F ++ A
Sbjct: 227 FGGIIGIVTYNIFTHKVDAFTYVIDEAA 254
>gi|15641555|ref|NP_231187.1| biopolymer transport protein ExbB-related protein [Vibrio cholerae
O1 biovar El Tor str. N16961]
gi|121587218|ref|ZP_01676992.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae
2740-80]
gi|121726921|ref|ZP_01680122.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae V52]
gi|153818886|ref|ZP_01971553.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae NCTC
8457]
gi|153823108|ref|ZP_01975775.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae B33]
gi|227081702|ref|YP_002810253.1| biopolymer transport protein [Vibrio cholerae M66-2]
gi|229508506|ref|ZP_04398009.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae BX
330286]
gi|229511424|ref|ZP_04400903.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae B33]
gi|229518563|ref|ZP_04408006.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae RC9]
gi|229607912|ref|YP_002878560.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae
MJ-1236]
gi|254848668|ref|ZP_05238018.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae MO10]
gi|255745016|ref|ZP_05418966.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholera CIRS
101]
gi|262161698|ref|ZP_06030716.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae INDRE
91/1]
gi|298498366|ref|ZP_07008173.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae MAK
757]
gi|9656053|gb|AAF94701.1| biopolymer transport protein ExbB-related protein [Vibrio cholerae
O1 biovar El Tor str. N16961]
gi|121548561|gb|EAX58615.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae
2740-80]
gi|121630683|gb|EAX63070.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae V52]
gi|126510556|gb|EAZ73150.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae NCTC
8457]
gi|126519363|gb|EAZ76586.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae B33]
gi|227009590|gb|ACP05802.1| biopolymer transport protein [Vibrio cholerae M66-2]
gi|229343252|gb|EEO08227.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae RC9]
gi|229351389|gb|EEO16330.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae B33]
gi|229354460|gb|EEO19383.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae BX
330286]
gi|229370567|gb|ACQ60990.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae
MJ-1236]
gi|254844373|gb|EET22787.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae MO10]
gi|255737487|gb|EET92882.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholera CIRS
101]
gi|262028430|gb|EEY47085.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae INDRE
91/1]
gi|297542699|gb|EFH78749.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae MAK
757]
Length = 457
Score = 96.4 bits (239), Expect = 3e-18, Method: Composition-based stats.
Identities = 39/203 (19%), Positives = 81/203 (39%), Gaps = 28/203 (13%)
Query: 18 MQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLK 77
+Q G + +I +L ++ + + + TLR++ + K+ +
Sbjct: 262 LQAGGVIGNVILVLLGVGLI---IALYRGAILATLRQKIKAQL-------------KNPE 305
Query: 78 NHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGS 137
N L I E ++S + ++ + A+ E + LS L
Sbjct: 306 QPGNNPLGRILAVYNKEQQRSV-----------EALELRLLEAVVDEQNHLETGLSMLKL 354
Query: 138 MSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-VVSIPGIIESLISILLGLCVSIPSSIAY 196
+++ ++G+LG V GM+ FQ I + + + V GI +L++ + GL +IP +A+
Sbjct: 355 LAALAPMLGLLGTVTGMIETFQVITQFGNGDPKVMAGGISMALVTTVEGLIAAIPLLLAH 414
Query: 197 NKFIEDSKKFAMQMEGFANEFSA 219
N ++ +E A
Sbjct: 415 NILSAQAEAIRNILEKQGIGLVA 437
>gi|330952670|gb|EGH52930.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae Cit 7]
Length = 225
Score = 96.4 bits (239), Expect = 3e-18, Method: Composition-based stats.
Identities = 46/218 (21%), Positives = 87/218 (39%), Gaps = 19/218 (8%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
++ L G + + + SI + +II++ R W + +
Sbjct: 1 MWELVKSGGWM----MLPIILSSIAAAGIIIERLWTLRASRITPPHLLGQVWQWIQEKKL 56
Query: 73 -CKSLKN-HHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
+ LK + L I + ++ + + + ++ A AR + E+
Sbjct: 57 DSEKLKQLRADSPLGEILAAGLANSRHGR-----------EIMKECIEEAAARVIHELER 105
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGLCV 188
LS LGS+++ L+G+LG VLGM+ F S +G +N V GI ++LI GL V
Sbjct: 106 YLSALGSIAAMAPLLGLLGTVLGMIDIFGSFNSSGATANAGVLAGGISKALICTASGLIV 165
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ + + + ME A ++ +
Sbjct: 166 AIPAIFFHRFLQSRVDELVVGMEQQAIRLVEVVQGDRD 203
>gi|171909542|ref|ZP_02925012.1| MotA/TolQ/ExbB proton channel [Verrucomicrobium spinosum DSM 4136]
Length = 207
Score = 96.4 bits (239), Expect = 3e-18, Method: Composition-based stats.
Identities = 39/199 (19%), Positives = 78/199 (39%), Gaps = 14/199 (7%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAI 87
+ L+ + SI+S +VII K++ R F + + + + L +
Sbjct: 1 MILIVLCSIISATVIIMKALQL----RDSILFPAHIE--EEIRKIERYATTGDITPLQNM 54
Query: 88 FMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGI 147
S + ++ + + A L + + L + + L+G+
Sbjct: 55 LEEDGSVAAQLGIIAISGKHETREENNEACETAAHVILHRLETGVPLLEVIVTVSPLLGL 114
Query: 148 LGAVLGMMGFFQSIAGYY----SNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDS 203
LGAV+G++ F + ++ GI E+L S + GL V+IP+ IA+ F
Sbjct: 115 LGAVVGLVTVFSTFGTGNVVPDADTQQVAKGIAEALHSTIAGLLVAIPTVIAHGYFSRKL 174
Query: 204 KKFAMQME----GFANEFS 218
+++ME ++F
Sbjct: 175 DAISVRMELILRRAIHDFH 193
>gi|297579115|ref|ZP_06941043.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae
RC385]
gi|297536709|gb|EFH75542.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae
RC385]
Length = 457
Score = 96.4 bits (239), Expect = 3e-18, Method: Composition-based stats.
Identities = 41/214 (19%), Positives = 87/214 (40%), Gaps = 31/214 (14%)
Query: 18 MQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLK 77
+Q G + +I +L + + + + TLR++ + K+ +
Sbjct: 262 LQAGGVIGNVILVLLG---VGLIIALYRGAILATLRQKIKAQL-------------KNPE 305
Query: 78 NHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGS 137
N L I E ++S + ++ + A+ E + LS L
Sbjct: 306 QPGNNPLGRILAVYNKEQQRSV-----------EALELRLLEAVVDEQNHLETGLSMLKL 354
Query: 138 MSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-VVSIPGIIESLISILLGLCVSIPSSIAY 196
+++ ++G+LG V GM+ FQ I + + + V GI +L++ + GL +IP +A+
Sbjct: 355 LAALAPMLGLLGTVTGMIETFQVITQFGNGDPKVMAGGISMALVTTVEGLIAAIPLLLAH 414
Query: 197 NKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
N ++ +E ++++Q E + S
Sbjct: 415 NILSAQAETIRNILEKQG---IGLVAQQAERDCS 445
>gi|223939298|ref|ZP_03631178.1| MotA/TolQ/ExbB proton channel [bacterium Ellin514]
gi|223892011|gb|EEF58492.1| MotA/TolQ/ExbB proton channel [bacterium Ellin514]
Length = 211
Score = 96.4 bits (239), Expect = 3e-18, Method: Composition-based stats.
Identities = 39/206 (18%), Positives = 89/206 (43%), Gaps = 19/206 (9%)
Query: 29 TLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLET--VCKSL--KNHHNIGL 84
++ + SI+ + II++ + + E + ++ V + + +N + L
Sbjct: 7 IVMALTSIVGLAFIIERGLALRWSKNIPGAVEDAADACRTPADRPVLRRICEQNEKSSPL 66
Query: 85 AAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLL 144
A + ++A E + ++ + + +E+ ++ L L + L
Sbjct: 67 ARLLLTA-DEHMELP----------KEETESALQTRARQEIVKLERGLVVLEIVVGIAPL 115
Query: 145 VGILGAVLGMMGFFQSIAGYY-SNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDS 203
+G++G + GMM F ++ ++N GI L ++GL ++IPS IA++ + +
Sbjct: 116 LGLVGTIHGMMTLFGGLSQSSLADNTALAQGISLILNFTMMGLLIAIPSLIAWSYYSKKV 175
Query: 204 KKFAMQMEGFANEFSAILSRQTEGNI 229
+ A++ME EF + RQ +
Sbjct: 176 EMLAVEMETVCEEF---IRRQYRAAV 198
>gi|146306643|ref|YP_001187108.1| MotA/TolQ/ExbB proton channel [Pseudomonas mendocina ymp]
gi|145574844|gb|ABP84376.1| MotA/TolQ/ExbB proton channel [Pseudomonas mendocina ymp]
Length = 210
Score = 96.4 bits (239), Expect = 3e-18, Method: Composition-based stats.
Identities = 42/217 (19%), Positives = 86/217 (39%), Gaps = 18/217 (8%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
++ L G + + + SI + ++ ++ R W + +
Sbjct: 1 MWELVKAGGWM----MLPIILCSIAAAGIVAERLWTLRPARVTPANLLAQVWRWIKDKKL 56
Query: 73 C-KSLKN-HHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
+ LK + L I + ++ K + + ++ A AR + E+
Sbjct: 57 NNQKLKELREHSPLGQILAAGLANSKHGR-----------EIMKECIEEAAARVIHELER 105
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYY-SNNVVSIPGIIESLISILLGLCVS 189
L+ LG+++ L+G+LG VLGM+ F S G +N + GI ++LI+ GL V+
Sbjct: 106 YLNALGTIAGIAPLLGLLGTVLGMIEIFSSFMGSGMANAPMLAGGISKALITTAAGLMVA 165
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
IP+ + + + ME A + ++ +
Sbjct: 166 IPALFFHRYLQRRVDELVVGMEQEAIKLVEMVQGDRD 202
>gi|330448370|ref|ZP_08312018.1| motA/TolQ/ExbB proton channel family protein [Photobacterium
leiognathi subsp. mandapamensis svers.1.1.]
gi|328492561|dbj|GAA06515.1| motA/TolQ/ExbB proton channel family protein [Photobacterium
leiognathi subsp. mandapamensis svers.1.1.]
Length = 455
Score = 96.0 bits (238), Expect = 3e-18, Method: Composition-based stats.
Identities = 42/213 (19%), Positives = 86/213 (40%), Gaps = 29/213 (13%)
Query: 19 QMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKN 78
G+ K I+ LL I + + I + V T+++Q ++ K+
Sbjct: 260 AGGVVGKIILLLLAIGA----GIAIFRGVTLATIKQQIKKQL-------------KNPDQ 302
Query: 79 HHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSM 138
N L + E +S + ++ + AI E + + + LS L
Sbjct: 303 VGNNPLGRVLAVYNKEQNRSV-----------EALELRLLEAIVDEQQGLEKGLSMLKLF 351
Query: 139 SSAGLLVGILGAVLGMMGFFQSIAGYYSNN-VVSIPGIIESLISILLGLCVSIPSSIAYN 197
++ ++G+LG V GM+ FQ I + + + V GI +L++ +LGL ++P +A+N
Sbjct: 352 AALAPMLGLLGTVTGMIETFQVITQFGNGDPKVMAGGISMALVTTVLGLIAAMPLLLAHN 411
Query: 198 KFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
++ +E A + + + +
Sbjct: 412 VLSTQAENIRSILEKQGISLVAEQAEKNDAKKA 444
>gi|303229070|ref|ZP_07315876.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Veillonella atypica ACS-134-V-Col7a]
gi|303230886|ref|ZP_07317630.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Veillonella atypica ACS-049-V-Sch6]
gi|302514399|gb|EFL56397.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Veillonella atypica ACS-049-V-Sch6]
gi|302516281|gb|EFL58217.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Veillonella atypica ACS-134-V-Col7a]
Length = 203
Score = 96.0 bits (238), Expect = 3e-18, Method: Composition-based stats.
Identities = 30/201 (14%), Positives = 80/201 (39%), Gaps = 18/201 (8%)
Query: 14 FALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLET-- 71
LF G+ ++ L +F + + +++ ++ + + + ++ +G++
Sbjct: 5 IHLFNAGGV----VMYPLVLFMLAACTILFERIRMYRRIDSEIQQLSSSIEAGRNANDWI 60
Query: 72 VCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEK 131
+ +++ L+ + + + ++ + + E +
Sbjct: 61 ALEQAIKNNDDALSQFVTPIV------------DSVYNFEGLENRLHDVVGYMDERLKRG 108
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIP 191
L++L M + L+G+LG V+GM+ F ++ G V G+ E+LI+ GL V+I
Sbjct: 109 LNWLSMMVTMAPLLGLLGTVVGMIRSFAAVGGDIGAPTVITGGVSEALIATATGLSVAIV 168
Query: 192 SSIAYNKFIEDSKKFAMQMEG 212
+ ++ ++E
Sbjct: 169 ALAIHSWCTSKVNYDIAKLEQ 189
>gi|149278748|ref|ZP_01884883.1| putative transport related membrane protein [Pedobacter sp. BAL39]
gi|149230367|gb|EDM35751.1| putative transport related membrane protein [Pedobacter sp. BAL39]
Length = 236
Score = 96.0 bits (238), Expect = 3e-18, Method: Composition-based stats.
Identities = 35/220 (15%), Positives = 88/220 (40%), Gaps = 22/220 (10%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRR----QFREFEQLFWS 65
++ L + G ++ L + L+ + +++ + + + Q
Sbjct: 32 ELHFIDLLFKGGW----VMIPLAFLAFLALVIFVERYLTIRKASKTESNLMLQIRQYIHE 87
Query: 66 GQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
G+ LE +L ++N LA + + + I+ ++ E+
Sbjct: 88 GR-LENAI-ALCRNNNSPLARMLEKGLKRIGRPIKD-----------IEAAIENNGKLEV 134
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILL 184
++ + + LG ++ ++G +G ++G++ F ++ + + +I G+ +I+
Sbjct: 135 SKLEKNIGILGIVAGIAPMLGFVGTIIGVITIFHDVSIKGAIEIGTISGGLYTKMITSAT 194
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
GL V I + I Y+ ++ ++ME A EF +L
Sbjct: 195 GLIVGIIAYILYHILNMMVERIILRMETDAIEFIDLLEEP 234
>gi|198284047|ref|YP_002220368.1| MotA/TolQ/ExbB proton channel [Acidithiobacillus ferrooxidans ATCC
53993]
gi|218668040|ref|YP_002426695.1| MotA/TolQ/ExbB proton channel family protein [Acidithiobacillus
ferrooxidans ATCC 23270]
gi|198248568|gb|ACH84161.1| MotA/TolQ/ExbB proton channel [Acidithiobacillus ferrooxidans ATCC
53993]
gi|218520253|gb|ACK80839.1| MotA/TolQ/ExbB proton channel family protein [Acidithiobacillus
ferrooxidans ATCC 23270]
Length = 225
Score = 96.0 bits (238), Expect = 3e-18, Method: Composition-based stats.
Identities = 41/196 (20%), Positives = 80/196 (40%), Gaps = 17/196 (8%)
Query: 29 TLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIF 88
LL I +V I++ + + R E + L N LA I
Sbjct: 22 ILLLIA----LTVSIERFLFLNRMVRLGNEA----------ALAVEDLPNLQGRALAEIA 67
Query: 89 MSAMSEWKKSCDKGARSPIGIQD--RIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVG 146
+ ++ ++ R P I+D R+ ++ A+ R++ + ++L L ++ + L+G
Sbjct: 68 EKSAFPFRAILERPVRFP-HIKDSGRLSEILQEAVMRQVPVLDKRLWILDTIVTLAPLLG 126
Query: 147 ILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKF 206
+LG ++GM FQ + N + + E+L++ GL ++I +A+N +
Sbjct: 127 LLGTIIGMFHAFQVLNNAAQNPTLITGSVAEALLATAAGLIIAIVGLVAFNGLHNRMRYV 186
Query: 207 AMQMEGFANEFSAILS 222
QME L
Sbjct: 187 VHQMETLRTMLINRLE 202
>gi|326799632|ref|YP_004317451.1| MotA/TolQ/ExbB proton channel [Sphingobacterium sp. 21]
gi|326550396|gb|ADZ78781.1| MotA/TolQ/ExbB proton channel [Sphingobacterium sp. 21]
Length = 233
Score = 96.0 bits (238), Expect = 3e-18, Method: Composition-based stats.
Identities = 35/217 (16%), Positives = 90/217 (41%), Gaps = 22/217 (10%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRR----QFREFEQLFWS 65
D+S+ L ++ G ++ + I + L + I++ + R + +Q S
Sbjct: 29 DLSLLDLLIKGGW----VMIPIAILAFLGLVIFIERYLTIKKASRYDSNLMIQVKQNIMS 84
Query: 66 GQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
G+ +L + N L A+ ++ + I+ ++ E+
Sbjct: 85 GR--LEAALALCRNSNGPLGAMLQKGLTRIGRPIKD-----------IEGAIENVGKLEV 131
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILL 184
++ + ++ LG ++ ++G +G ++G++ F ++ + ++ G+ +I+
Sbjct: 132 SKLEKNINILGIIAGIAPMLGFVGTIIGVITIFHEVSIKGVIEIGTVSGGLYTKMITSAS 191
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
GL + I + + Y+ + ++ME A EF +L
Sbjct: 192 GLIIGIIAYVGYHILNMMVDRLILRMETDAIEFIDLL 228
>gi|153213369|ref|ZP_01948758.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae 1587]
gi|153824812|ref|ZP_01977479.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae
MZO-2]
gi|124116022|gb|EAY34842.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae 1587]
gi|149741530|gb|EDM55560.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae
MZO-2]
Length = 457
Score = 96.0 bits (238), Expect = 3e-18, Method: Composition-based stats.
Identities = 39/203 (19%), Positives = 80/203 (39%), Gaps = 28/203 (13%)
Query: 18 MQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLK 77
+Q G + +I +L ++ + + + TLR++ + K +
Sbjct: 262 LQAGGVIGNVILVLLGVGLI---IALYRGAILATLRQKIKAQL-------------KKPE 305
Query: 78 NHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGS 137
N L I E ++S + ++ + A+ E + LS L
Sbjct: 306 QPGNNPLGRILAVYNKEQQRSV-----------EALELRLLEAVVDEQNHLETGLSMLKL 354
Query: 138 MSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-VVSIPGIIESLISILLGLCVSIPSSIAY 196
+++ ++G+LG V GM+ FQ I + + + V GI +L++ + GL +IP +A+
Sbjct: 355 LAALAPMLGLLGTVTGMIETFQVITQFGNGDPKVMAGGISMALVTTVEGLIAAIPLLLAH 414
Query: 197 NKFIEDSKKFAMQMEGFANEFSA 219
N ++ +E A
Sbjct: 415 NILSAQAEAIRNILEKQGIGLVA 437
>gi|88798813|ref|ZP_01114396.1| Biopolymer transport protein [Reinekea sp. MED297]
gi|88778576|gb|EAR09768.1| Biopolymer transport protein [Reinekea sp. MED297]
Length = 195
Score = 96.0 bits (238), Expect = 4e-18, Method: Composition-based stats.
Identities = 42/203 (20%), Positives = 85/203 (41%), Gaps = 12/203 (5%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV-CKSLKNHHNIGLAA 86
+ + + S+++ ++ +++ + + ++ WS + + +K L
Sbjct: 1 MLPIILCSVIALAITVERYWTLRVSKVRPKDQLPQVWSWIKKHELDSEKIKQLKQSSLFG 60
Query: 87 IFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVG 146
+SA G S +D + + A E+ + LS LG++++ L+G
Sbjct: 61 YVLSA----------GLTSSRYGRDAMKDAIQEAGDHAAHEMEKFLSTLGTIAAISPLLG 110
Query: 147 ILGAVLGMMGFFQSIAGYYSNN-VVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKK 205
+LG VLGM+ F I + N V GI ++LI+ GL V+IPS I + +
Sbjct: 111 LLGTVLGMVDVFTDIMIQGTGNTAVLAGGISKALITTAAGLSVAIPSVIFHRALSRKIDE 170
Query: 206 FAMQMEGFANEFSAILSRQTEGN 228
+ ME + + + + G
Sbjct: 171 LLVLMEQDSAKLVEAIHAENSGQ 193
>gi|229523634|ref|ZP_04413039.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae bv.
albensis VL426]
gi|229337215|gb|EEO02232.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae bv.
albensis VL426]
Length = 457
Score = 96.0 bits (238), Expect = 4e-18, Method: Composition-based stats.
Identities = 39/203 (19%), Positives = 80/203 (39%), Gaps = 28/203 (13%)
Query: 18 MQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLK 77
+Q G + +I +L + + + + TLR++ + K+ +
Sbjct: 262 LQAGGVIGNVILVLLG---VGLIIALYRGAILATLRQKIKAQL-------------KNPE 305
Query: 78 NHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGS 137
N L I E ++S + ++ + A+ E + LS L
Sbjct: 306 QPGNNPLGRILAVYNKEQQRSV-----------EALELRLLEAVVDEQNHLETGLSMLKL 354
Query: 138 MSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-VVSIPGIIESLISILLGLCVSIPSSIAY 196
+++ ++G+LG V GM+ FQ I + + + V GI +L++ + GL +IP +A+
Sbjct: 355 LAALAPMLGLLGTVTGMIETFQVITQFGNGDPKVMAGGISMALVTTVEGLIAAIPLLLAH 414
Query: 197 NKFIEDSKKFAMQMEGFANEFSA 219
N ++ +E A
Sbjct: 415 NILSAQAEAIRNILEKQGIGLVA 437
>gi|326335793|ref|ZP_08201973.1| MotA/TolQ/ExbB proton channel family protein [Capnocytophaga sp.
oral taxon 338 str. F0234]
gi|325692032|gb|EGD33991.1| MotA/TolQ/ExbB proton channel family protein [Capnocytophaga sp.
oral taxon 338 str. F0234]
Length = 238
Score = 96.0 bits (238), Expect = 4e-18, Method: Composition-based stats.
Identities = 37/215 (17%), Positives = 84/215 (39%), Gaps = 21/215 (9%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITL----RRQFREFEQLFWSGQ 67
S F++ G + + + I+ +V I++ + ++ E +G
Sbjct: 35 SFKEYFIKGGP---AYMAPILLCLIIGLAVAIERIIYLTMATTNTKKLLENVEDALKNGG 91
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
K + + +A+IF + R GI D +++ + ++
Sbjct: 92 I--EAAKEVCRNTPGPVASIFYQGLD----------RVDEGI-DIVEKSVVSYGGVQMGL 138
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGL 186
+ + +S++ S ++G +G V+GM+ F+ I+ + I G I +L++ + GL
Sbjct: 139 LEKNVSWISLFISIAPMLGFMGTVIGMIQAFEKISLAGGLDASLIAGDIQVALLTTVFGL 198
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
V++ + YN + ME + +L
Sbjct: 199 IVAMILQVFYNYIVAKVDSIVNNMEDASISLVDLL 233
>gi|296156467|ref|ZP_06839305.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. Ch1-1]
gi|295893066|gb|EFG72846.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. Ch1-1]
Length = 215
Score = 96.0 bits (238), Expect = 4e-18, Method: Composition-based stats.
Identities = 37/206 (17%), Positives = 87/206 (42%), Gaps = 21/206 (10%)
Query: 17 FMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQ-----FREFEQLFWSGQSLET 71
+ +I L + ++L+ ++++ ++ F+ R + S L+
Sbjct: 7 ILAAVRVGGWVIYPLTLLAVLAVAIVLDRAYVFLRFGRLPAAIYAAHEIDVLGSDIDLDN 66
Query: 72 VCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE-ITE 130
+ SA + +++ P + + + ++A ++E ++
Sbjct: 67 LLNEA-------------SAQNAFRRMNSPWLPDP-SVPLWLREVKAESVASQIERDMSR 112
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV-SIPGIIESLISILLGLCVS 189
L ++ +A L+G+LG ++GMM FQ G + G+ +SL++ +GL V+
Sbjct: 113 GFWVLETIVTAAPLLGLLGTIVGMMHSFQLFGGTGLVDPAGVTGGVAQSLVATAIGLVVA 172
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFAN 215
+ + A+N F ++ ++E FAN
Sbjct: 173 LFALFAFNYFSRRLERLMDELESFAN 198
>gi|126662960|ref|ZP_01733958.1| hypothetical protein FBBAL38_06400 [Flavobacteria bacterium BAL38]
gi|126624618|gb|EAZ95308.1| hypothetical protein FBBAL38_06400 [Flavobacteria bacterium BAL38]
Length = 269
Score = 96.0 bits (238), Expect = 4e-18, Method: Composition-based stats.
Identities = 36/200 (18%), Positives = 77/200 (38%), Gaps = 18/200 (9%)
Query: 28 ITLLFIFSILSWSVIIQKSVNF----ITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIG 83
+ ++ I IL ++ I++ + ++ E E SG K + +
Sbjct: 78 MGIVLICLILGLAIAIERIIYLNLSSTNSKKLISEVESALNSGGV--NAAKEVARNTAGP 135
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
+A+IF + + D ++ + ++ ++ + +S++ +
Sbjct: 136 VASIFYQGLDRYSHGLDSA-----------EKSIVAYGGVQMGQLEKNVSWISLFIALAP 184
Query: 144 LVGILGAVLGMMGFFQSIAGYYSN-NVVSIPGIIESLISILLGLCVSIPSSIAYNKFIED 202
++G +G V+GM+ F I S + GI +L++ + GL V+I I YN
Sbjct: 185 MLGFMGTVIGMIEAFDQIQSAGSMEPSLVAGGIKVALLTTVFGLIVAIILQIFYNYITAK 244
Query: 203 SKKFAMQMEGFANEFSAILS 222
ME + +LS
Sbjct: 245 IDSIVNDMEDASISLVDMLS 264
>gi|110638417|ref|YP_678626.1| biopolymer transport protein [Cytophaga hutchinsonii ATCC 33406]
gi|110281098|gb|ABG59284.1| outer membrane transport energization protein ExbB [Cytophaga
hutchinsonii ATCC 33406]
Length = 275
Score = 96.0 bits (238), Expect = 4e-18, Method: Composition-based stats.
Identities = 43/205 (20%), Positives = 90/205 (43%), Gaps = 9/205 (4%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITL--RRQFREFEQLFWSGQSL 69
+ A+ + G V +++ F ++++SV ++ + F + S S
Sbjct: 52 NYLAIVHEGGAIVPVLMS--FFLMVITFSV--ERFITIRQAYGSGSLDNFVRKIKSYLSS 107
Query: 70 ETVCKSLK--NHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
V ++ L + ++ + ++K S Q + + ++ A + EL
Sbjct: 108 NDVNSAISVCEEQKGSLGNVTLAVLKKYKSVAADKTMSKDQKQVALQKELEEATSLELPI 167
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISILLGL 186
+ + L+ L +++S LVG+LG V+GM+ F ++A + N ++ GI E+LI+ LG+
Sbjct: 168 LEKNLTILATLASVATLVGLLGTVMGMIKAFAALASSGTPNAEALATGISEALINTALGI 227
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQME 211
S + I YN F ++
Sbjct: 228 ASSAFAIIFYNLFTSQIDTLTYSID 252
>gi|313896247|ref|ZP_07829800.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Selenomonas sp. oral taxon 137 str. F0430]
gi|320530757|ref|ZP_08031801.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Selenomonas artemidis F0399]
gi|312975046|gb|EFR40508.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Selenomonas sp. oral taxon 137 str. F0430]
gi|320137044|gb|EFW28982.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Selenomonas artemidis F0399]
Length = 240
Score = 96.0 bits (238), Expect = 4e-18, Method: Composition-based stats.
Identities = 45/201 (22%), Positives = 80/201 (39%), Gaps = 20/201 (9%)
Query: 14 FALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITL---RRQFREFEQLFWSGQSLE 70
F Q G ++ L SI + I++++ F R F +GQ E
Sbjct: 19 IHFFHQGG----TVMYFLLAASIFVVFIAIERALYFAGADAGRSFAHAFMLHIANGQFKE 74
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
V L ++ I SA+S+ K+ K ++ M+V L +
Sbjct: 75 AV--QLTEVKRGSISDILFSAISKNSKNSRK-----------MNSYMEVQSGIALSKFRN 121
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSI 190
+L +L + + L+G+LG + GM+ F + G+ E+LI+ +GLCV+I
Sbjct: 122 RLYYLSVVVTMAPLLGLLGTISGMISTFSVFNLDAGDPTAITGGVGEALIATAMGLCVAI 181
Query: 191 PSSIAYNKFIEDSKKFAMQME 211
+ + F + + ME
Sbjct: 182 IALAVHAYFSQRIENIVTDME 202
>gi|91793511|ref|YP_563162.1| MotA/TolQ/ExbB proton channel [Shewanella denitrificans OS217]
gi|91715513|gb|ABE55439.1| MotA/TolQ/ExbB proton channel [Shewanella denitrificans OS217]
Length = 488
Score = 96.0 bits (238), Expect = 4e-18, Method: Composition-based stats.
Identities = 48/219 (21%), Positives = 98/219 (44%), Gaps = 20/219 (9%)
Query: 6 LAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRR---QFREFEQL 62
LA S + G+ V I+ F++L+ + + K+V L + ++ +
Sbjct: 261 LAQHQESFAEHLGKGGIWVIPIM----GFALLALIIALVKAVTLFRLEKVQPLSQKVQPF 316
Query: 63 FWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDR--MMDVA 120
G+ L + A + +A+ +++++ A+ I+ R R ++ +
Sbjct: 317 SQKGEPLSQLAG----------AGLKRAALGQYQQALADIAKQYPQIEARQQRDDLLLDS 366
Query: 121 IARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESL 179
+ + EI L+ + +S L+G+LG V GM+ F+ + + + + ++ GI ESL
Sbjct: 367 LIQTKREIERGLTAIAVTASVAPLLGLLGTVSGMIQTFKLMTLFGAGDANAVSGGISESL 426
Query: 180 ISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFS 218
++ LGL V+IP+ IA+ F +E +A S
Sbjct: 427 VTTELGLIVAIPALIAHALMSRRCHHFMAGLESYAVALS 465
>gi|332307698|ref|YP_004435549.1| MotA/TolQ/ExbB proton channel [Glaciecola agarilytica 4H-3-7+YE-5]
gi|332175027|gb|AEE24281.1| MotA/TolQ/ExbB proton channel [Glaciecola agarilytica 4H-3-7+YE-5]
Length = 467
Score = 96.0 bits (238), Expect = 4e-18, Method: Composition-based stats.
Identities = 31/126 (24%), Positives = 63/126 (50%), Gaps = 1/126 (0%)
Query: 106 PIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYY 165
P + ++ + AI E+ +++ L+ + +S L+G+LG V GM+ FQ+I +
Sbjct: 339 PEADTESLELHLTEAILGEIPKLSRNLTIIKIISVVAPLMGLLGTVTGMINTFQAITLFG 398
Query: 166 SNN-VVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+ + + GI +L++ +LGL V+IP ++ Y SK ++ A+ A + +
Sbjct: 399 TGDPKLMAGGISTALVTTVLGLVVAIPMTLLYAMLNTRSKDVVFILQEQASGVIAERAER 458
Query: 225 TEGNIS 230
E +
Sbjct: 459 MEAKST 464
>gi|332519141|ref|ZP_08395608.1| MotA/TolQ/ExbB proton channel [Lacinutrix algicola 5H-3-7-4]
gi|332044989|gb|EGI81182.1| MotA/TolQ/ExbB proton channel [Lacinutrix algicola 5H-3-7-4]
Length = 257
Score = 96.0 bits (238), Expect = 4e-18, Method: Composition-based stats.
Identities = 33/204 (16%), Positives = 85/204 (41%), Gaps = 18/204 (8%)
Query: 28 ITLLFIFSILSWSVIIQKSVNF----ITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIG 83
+ ++ + IL ++ I++ + ++ + E+ SG K + +
Sbjct: 67 MGIVLLCLILGLAIAIERIIFLNLSTGNSKKLAQNVEEALQSGGI--EAAKEVCRNTKGP 124
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
+A+I+ + R+ G+ + ++ + ++ ++ + +S++ +
Sbjct: 125 VASIYYQGLD----------RADDGL-ESAEKAVVAYGGVQMGQLEKNVSWISLFIALAP 173
Query: 144 LVGILGAVLGMMGFFQSI-AGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIED 202
++G +G V+GM+ F I + + + GI +L++ + GL V+I I YN +
Sbjct: 174 MLGFMGTVIGMIQAFDKIQSAGGMDATLVAGGIKVALLTTVFGLIVAIILQIFYNYIVAK 233
Query: 203 SKKFAMQMEGFANEFSAILSRQTE 226
ME + +LS+ +
Sbjct: 234 IDNIVNDMEDASITLMDMLSKHKK 257
>gi|89889420|ref|ZP_01200931.1| MotA/TolQ/ExbB family proton channel [Flavobacteria bacterium
BBFL7]
gi|89517693|gb|EAS20349.1| MotA/TolQ/ExbB family proton channel [Flavobacteria bacterium
BBFL7]
Length = 263
Score = 96.0 bits (238), Expect = 4e-18, Method: Composition-based stats.
Identities = 36/211 (17%), Positives = 83/211 (39%), Gaps = 23/211 (10%)
Query: 17 FMQMGLA-VKCIITLLFIFSILSWSVIIQKSVNF----ITLRRQFREFEQLFWSGQSLET 71
F++ G + ++ L IL ++ I++ + ++ + E SG
Sbjct: 62 FIEGGPVFMSFVLICL----ILGLAIAIERIIYLNLSTTNSKKLAAQVEDALKSGGV--E 115
Query: 72 VCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEK 131
K + + +A+I+ + +S + ++ + ++ ++ +
Sbjct: 116 AAKEVCRNTKGPVASIYYQGLDRADESV-----------EAAEKAVVAYGGVQMGQLEKN 164
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSN-NVVSIPGIIESLISILLGLCVSI 190
+S++ + ++G +G VLGM+ F +I + + GI +L++ + GL V+I
Sbjct: 165 VSWVSLFIALAPMLGFMGTVLGMIDAFDNIQSAGAMEPALVAGGIKVALLTTVFGLIVAI 224
Query: 191 PSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
I YN + ME + IL
Sbjct: 225 ILQIFYNYIVAKIDSIVNDMEDASITLIDIL 255
>gi|302187293|ref|ZP_07263966.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. syringae
642]
Length = 225
Score = 96.0 bits (238), Expect = 4e-18, Method: Composition-based stats.
Identities = 46/218 (21%), Positives = 87/218 (39%), Gaps = 19/218 (8%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
++ L G + + + SI + +II++ R W + +
Sbjct: 1 MWELVKSGGWM----MLPIILSSIAAAGIIIERLWTLRASRITPPHLLGQVWQWIQEKKL 56
Query: 73 -CKSLKN-HHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
+ LK + L I + ++ + + + ++ A AR + E+
Sbjct: 57 DSEKLKQLRADSPLGEILAAGLANSRHGR-----------EIMKECIEEAAARVIHELER 105
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGLCV 188
LS LGS+++ L+G+LG VLGM+ F S +G +N V GI ++LI GL V
Sbjct: 106 YLSALGSIAAMAPLLGLLGTVLGMIDIFGSFNSSGATANAGVLAGGISKALICTASGLIV 165
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ + + + ME A ++ +
Sbjct: 166 AIPAIFFHRFLQSRVDELVVGMEQQAIRLVEVVQGDRD 203
>gi|312131885|ref|YP_003999225.1| outer membrane transport energization protein exbb [Leadbetterella
byssophila DSM 17132]
gi|311908431|gb|ADQ18872.1| outer membrane transport energization protein ExbB [Leadbetterella
byssophila DSM 17132]
Length = 273
Score = 96.0 bits (238), Expect = 4e-18, Method: Composition-based stats.
Identities = 39/211 (18%), Positives = 82/211 (38%), Gaps = 12/211 (5%)
Query: 14 FALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITL--RRQFREFEQL---FWSGQS 68
+ G V +L F ++ I++ V F F + +
Sbjct: 60 LGIVYAGGFIVP----ILLSFLLMVLVFGIERFVTISKAAGSGDLDAFVAKVRGFLNSNN 115
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ K + + + +A+ ++++ + GA + + + ++ A + EL +
Sbjct: 116 IADAKKECEKQKGT-VGNVIKTALDKYEQLQNDGALNKEQKLAALQKEVEEATSLELPML 174
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI--PGIIESLISILLGL 186
+ L+ L ++ S LV +LG VLGM+ F ++ + + GI E+LI+ LG+
Sbjct: 175 EKNLAILSTLGSVSTLVALLGTVLGMIRSFFALGQGGGSPDAAALSKGIAEALINTGLGI 234
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEF 217
S + I YN F +++
Sbjct: 235 GTSAIAIIVYNYFTASIDTLTYKIDEIGMSL 265
>gi|149280577|ref|ZP_01886693.1| biopolymer transport protein [Pedobacter sp. BAL39]
gi|149228692|gb|EDM34095.1| biopolymer transport protein [Pedobacter sp. BAL39]
Length = 275
Score = 95.6 bits (237), Expect = 4e-18, Method: Composition-based stats.
Identities = 36/203 (17%), Positives = 81/203 (39%), Gaps = 11/203 (5%)
Query: 15 ALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITL--RRQFREFE---QLFWSGQSL 69
+ + G V ++ +F+ I+ I++ + + F Q + ++
Sbjct: 63 GMAYKGGPIVP-VLMGMFLMVIV---FSIERMIVIGKATGKGSLDAFVKKIQALLNSNNI 118
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
E +A + S + ++++ + I + ++ A E+ +
Sbjct: 119 EGALAECDKQEGS-VANVIKSGLKKYREMEIEPNMDTDQKCLAIQKDIEEATTLEMPMLE 177
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISILLGLCV 188
+ L+ + ++ S G L G+LG V GM+ F +A + + ++ GI E+LI+ G+
Sbjct: 178 QNLTVIATLVSVGTLTGLLGTVTGMIKAFGGLANSGAPDQAALATGISEALINTATGIGT 237
Query: 189 SIPSSIAYNKFIEDSKKFAMQME 211
S + I YN K ++
Sbjct: 238 STFAIIMYNILTSKIDKLTYAID 260
>gi|328950991|ref|YP_004368326.1| MotA/TolQ/ExbB proton channel [Marinithermus hydrothermalis DSM
14884]
gi|328451315|gb|AEB12216.1| MotA/TolQ/ExbB proton channel [Marinithermus hydrothermalis DSM
14884]
Length = 207
Score = 95.6 bits (237), Expect = 4e-18, Method: Composition-based stats.
Identities = 40/187 (21%), Positives = 73/187 (39%), Gaps = 18/187 (9%)
Query: 40 SVIIQKSVNFITLR----RQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEW 95
V ++ ++ R + RE E G+ LE ++ + H L ++ +
Sbjct: 23 YVFFERFLSLRRERLGGDKLMREVEACLRRGR-LEPAMEACRIHGGT-LGRFVLAGL--- 77
Query: 96 KKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMM 155
R P G+ +D + A+ E ++ L+ L + L+G+LG V GM+
Sbjct: 78 -------PRVPYGVA-AVDAALKAALLEEEARLSRGLAVLSVTAQVAPLLGLLGTVTGMI 129
Query: 156 GFFQSIAGYYSNNVVS-IPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFA 214
F +A GI E+L + GL V+IP+ + Y+ + ++E
Sbjct: 130 RAFNVLAVEGQTTAQLLAGGIGEALFTTAGGLIVAIPALMGYHYLAGRVEDLLTELEQRR 189
Query: 215 NEFSAIL 221
E L
Sbjct: 190 EELLGAL 196
>gi|37678432|ref|NP_933041.1| putative TolR protein [Vibrio vulnificus YJ016]
gi|320157685|ref|YP_004190064.1| motA/TolQ/ExbB proton channel family protein [Vibrio vulnificus
MO6-24/O]
gi|37197172|dbj|BAC93012.1| putative TolR protein [Vibrio vulnificus YJ016]
gi|319932997|gb|ADV87861.1| MotA/TolQ/ExbB proton channel family protein [Vibrio vulnificus
MO6-24/O]
Length = 453
Score = 95.6 bits (237), Expect = 4e-18, Method: Composition-based stats.
Identities = 30/117 (25%), Positives = 57/117 (48%), Gaps = 1/117 (0%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-V 169
+ ++ +D I R +I + + +S L+G+LG V+GM+G FQ+I + + +
Sbjct: 333 EDLEAKLDEIILRNAPKIERFIVSIKLFASVAPLLGLLGTVMGMIGTFQAITLFGTGDPK 392
Query: 170 VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+ GI E+L++ +LGL V+IP Y ++ +E + F A +
Sbjct: 393 LMAGGISEALVTTMLGLVVAIPLLFFYTLVHSKGRRLVQTLEEQSAGFIARYQEKLH 449
>gi|330962639|gb|EGH62899.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. maculicola
str. ES4326]
Length = 225
Score = 95.6 bits (237), Expect = 4e-18, Method: Composition-based stats.
Identities = 45/218 (20%), Positives = 86/218 (39%), Gaps = 19/218 (8%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
++ L G + + + SI + +II++ R W +
Sbjct: 1 MWELVKSGGWM----MLPIILSSIAAAGIIIERLWTLRASRIAPPHLLGQAWQWIQENKL 56
Query: 73 -CKSLKN-HHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
+ LK + L I + ++ + + + ++ A AR + ++
Sbjct: 57 DSEKLKQLRADSPLGEILAAGLANSRHGR-----------EIMKECIEEAAARVIHDLER 105
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGLCV 188
LS LGS+++ L+G+LG VLGM+ F S +G +N V GI ++LI GL V
Sbjct: 106 YLSALGSIAAMAPLLGLLGTVLGMIEIFGSFNSSGATANAGVLASGISKALICTASGLIV 165
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ + + + ME A ++ +
Sbjct: 166 AIPAIFFHRFLQSRVDELVVGMEQQAIRLVEVVQGDRD 203
>gi|257487568|ref|ZP_05641609.1| MotA/TolQ/ExbB proton channel family protein [Pseudomonas syringae
pv. tabaci ATCC 11528]
gi|289624520|ref|ZP_06457474.1| MotA/TolQ/ExbB proton channel family protein [Pseudomonas syringae
pv. aesculi str. NCPPB3681]
gi|330869285|gb|EGH03994.1| MotA/TolQ/ExbB proton channel family protein [Pseudomonas syringae
pv. aesculi str. 0893_23]
gi|330891487|gb|EGH24148.1| MotA/TolQ/ExbB proton channel family protein [Pseudomonas syringae
pv. mori str. 301020]
gi|330975226|gb|EGH75292.1| MotA/TolQ/ExbB proton channel family protein [Pseudomonas syringae
pv. aptata str. DSM 50252]
gi|330985577|gb|EGH83680.1| MotA/TolQ/ExbB proton channel family protein [Pseudomonas syringae
pv. lachrymans str. M301315]
gi|331012616|gb|EGH92672.1| MotA/TolQ/ExbB proton channel family protein [Pseudomonas syringae
pv. tabaci ATCC 11528]
Length = 225
Score = 95.6 bits (237), Expect = 4e-18, Method: Composition-based stats.
Identities = 45/218 (20%), Positives = 85/218 (38%), Gaps = 19/218 (8%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS--GQSLE 70
++ L G + + + SI + +II++ R W +
Sbjct: 1 MWELVKSGGWM----MLPIILSSIAAAGIIIERLWTLRASRITPPHLLGQVWQWIQEKKL 56
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
K + + L I + ++ + + + ++ A AR + E+
Sbjct: 57 DGEKLKQLRADSPLGEILAAGLANSRHGR-----------EIMKECIEEAAARVIHELER 105
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGLCV 188
LS LGS+++ L+G+LG VLGM+ F S +G +N V GI ++LI GL V
Sbjct: 106 YLSALGSIAAMAPLLGLLGTVLGMIDIFGSFNSSGATANAGVLAGGISKALICTASGLIV 165
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ + + + ME A ++ +
Sbjct: 166 AIPAIFFHRFLQSRVDELVVGMEQQAIRLVEVVQGDRD 203
>gi|27364292|ref|NP_759820.1| TolR [Vibrio vulnificus CMCP6]
gi|27360410|gb|AAO09347.1| TolR [Vibrio vulnificus CMCP6]
Length = 453
Score = 95.6 bits (237), Expect = 4e-18, Method: Composition-based stats.
Identities = 30/117 (25%), Positives = 57/117 (48%), Gaps = 1/117 (0%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-V 169
+ ++ +D I R +I + + +S L+G+LG V+GM+G FQ+I + + +
Sbjct: 333 EDLEAKLDEIILRNAPKIERFIVSIKLFASVAPLLGLLGTVMGMIGTFQAITLFGTGDPK 392
Query: 170 VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+ GI E+L++ +LGL V+IP Y ++ +E + F A +
Sbjct: 393 LMAGGISEALVTTMLGLVVAIPLLFFYTLVHSKGRRLVQTLEEQSAGFIARYQEKLH 449
>gi|147673075|ref|YP_001217099.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae O395]
gi|262169575|ref|ZP_06037266.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae RC27]
gi|3811311|gb|AAC69453.1| exbB-related protein [Vibrio cholerae]
gi|146314958|gb|ABQ19497.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae O395]
gi|227013459|gb|ACP09669.1| biopolymer transport protein [Vibrio cholerae O395]
gi|262021809|gb|EEY40519.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae RC27]
Length = 457
Score = 95.6 bits (237), Expect = 4e-18, Method: Composition-based stats.
Identities = 39/203 (19%), Positives = 81/203 (39%), Gaps = 28/203 (13%)
Query: 18 MQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLK 77
+Q G + +I +L ++ + + + TLR++ + K+ +
Sbjct: 262 LQAGGVIGNVILVLLGVGLI---IALYRGAILATLRQKIKAQL-------------KNPE 305
Query: 78 NHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGS 137
N L I E ++S + ++ + A+ E + LS L
Sbjct: 306 QPGNNPLGRILAVYNKEQQRSV-----------EALELRLLEAVVDEQNHLETGLSMLKL 354
Query: 138 MSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-VVSIPGIIESLISILLGLCVSIPSSIAY 196
+++ ++G+LG V GM+ FQ I + + + V GI +L++ + GL +IP +A+
Sbjct: 355 LAALAPMLGLLGTVTGMIETFQVITQFGNGDPKVMAGGISMALVTTVEGLIAAIPLLLAH 414
Query: 197 NKFIEDSKKFAMQMEGFANEFSA 219
N ++ +E A
Sbjct: 415 NILSAQAEAIRNILEKQGIGLVA 437
>gi|313159736|gb|EFR59093.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Alistipes sp. HGB5]
Length = 252
Score = 95.6 bits (237), Expect = 4e-18, Method: Composition-based stats.
Identities = 30/200 (15%), Positives = 79/200 (39%), Gaps = 18/200 (9%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITL----RRQFREFEQLFWSGQSLETVCKSLKNHHNIG 83
+ + + ++ +V I++ + ++ E +G K + +
Sbjct: 61 MLPVLLCLVIGLAVAIERILYLSLATINSKKLIAAVEDALKNGGI--EAAKEVCRNTRGP 118
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
+A+I+ + + + D +++ + + + ++ LS++G +
Sbjct: 119 IASIYYQGLDRYDQGL-----------DSVEKAVVSYGSVQTGQMESGLSWIGLFIALSP 167
Query: 144 LVGILGAVLGMMGFFQSIAGYYS-NNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIED 202
++G +G V+GM+ F +I + + GI +L++ L+GL ++ + YN +
Sbjct: 168 MLGFMGTVVGMIAAFDAIQAAGDISPTLVAGGIKVALLTTLMGLIAAVILQLFYNYIVSK 227
Query: 203 SKKFAMQMEGFANEFSAILS 222
ME + IL+
Sbjct: 228 IDSLVNDMEDSSITLMDILT 247
>gi|71736933|ref|YP_273869.1| MotA/TolQ/ExbB proton channel family protein [Pseudomonas syringae
pv. phaseolicola 1448A]
gi|71557486|gb|AAZ36697.1| MotA/TolQ/ExbB proton channel family protein [Pseudomonas syringae
pv. phaseolicola 1448A]
gi|320327719|gb|EFW83727.1| MotA/TolQ/ExbB proton channel family protein [Pseudomonas syringae
pv. glycinea str. race 4]
Length = 225
Score = 95.6 bits (237), Expect = 5e-18, Method: Composition-based stats.
Identities = 45/218 (20%), Positives = 85/218 (38%), Gaps = 19/218 (8%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS--GQSLE 70
++ L G + + + SI + +II++ R W +
Sbjct: 1 MWELVKSGGWM----MLPIILSSIAAAGIIIERLWTLRASRITPPHLLGQVWQWIQEKKL 56
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
K + + L I + ++ + + + ++ A AR + E+
Sbjct: 57 DGEKLKQLRADSPLGEILAAGLANSRHGR-----------EIMKECIEEAAARVIHELER 105
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGLCV 188
LS LGS+++ L+G+LG VLGM+ F S +G +N V GI ++LI GL V
Sbjct: 106 YLSALGSIAAMAPLLGLLGTVLGMIDIFGSFNSSGATANAGVLASGISKALICTASGLIV 165
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ + + + ME A ++ +
Sbjct: 166 AIPAIFFHRFLQSRVDELVVGMEQQAIRLVEVVQGDRD 203
>gi|88706386|ref|ZP_01104091.1| MotA/TolQ/ExbB proton channel [Congregibacter litoralis KT71]
gi|88699322|gb|EAQ96436.1| MotA/TolQ/ExbB proton channel [Congregibacter litoralis KT71]
Length = 474
Score = 95.6 bits (237), Expect = 5e-18, Method: Composition-based stats.
Identities = 29/124 (23%), Positives = 59/124 (47%), Gaps = 1/124 (0%)
Query: 97 KSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMG 156
+ +P + ++ M A+ RE ++ L+ L +++ L+G+LG V GM+
Sbjct: 343 RVLKVHEDNPSMDLETLELKMSEAVMRETPKLESGLTLLKIIAAVAPLMGLLGTVTGMII 402
Query: 157 FFQSIAGYYSNN-VVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFAN 215
FQ+I + + + GI +LI+ +LGL V+IP+ + + +++ + A
Sbjct: 403 TFQAITIFGAGDPKAMAGGISGALITTVLGLLVAIPTVLLHTLVNGRAQRIIHVLTEQAT 462
Query: 216 EFSA 219
A
Sbjct: 463 GIVA 466
>gi|312881678|ref|ZP_07741456.1| MotA/TolQ/ExbB proton channel family protein [Vibrio caribbenthicus
ATCC BAA-2122]
gi|309370741|gb|EFP98215.1| MotA/TolQ/ExbB proton channel family protein [Vibrio caribbenthicus
ATCC BAA-2122]
Length = 450
Score = 95.6 bits (237), Expect = 5e-18, Method: Composition-based stats.
Identities = 42/211 (19%), Positives = 89/211 (42%), Gaps = 32/211 (15%)
Query: 17 FMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSL 76
F G+ K I LL ++ + + + + +R Q ++ K+
Sbjct: 258 FQTAGIVGKVIAGLL----VIGLLIGVVRGTVLLRVRHQ-------------IQKQLKTP 300
Query: 77 KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLG 136
+ N L + +S + K D+ + ++ + A+ E E+ + LS L
Sbjct: 301 DSPGNNPLGRV----LSVYNKDKDR-------TVEALELRLLEAVVDEQSELEKGLSMLK 349
Query: 137 SMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-VVSIPGIIESLISILLGLCVSIPSSIA 195
++ ++G+LG V GM+ FQ I + + + + GI +L++ +LGL ++P +A
Sbjct: 350 LFAALAPMLGLLGTVTGMIETFQVITQFGNGDPKIMADGISMALVTTVLGLITAMPLLLA 409
Query: 196 YNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+N ++ +E A+++ Q E
Sbjct: 410 HNILSSQAETIRTTLEKQG---IALVAEQAE 437
>gi|171915259|ref|ZP_02930729.1| MotA/TolQ/ExbB proton channel family domain protein
[Verrucomicrobium spinosum DSM 4136]
Length = 231
Score = 95.6 bits (237), Expect = 5e-18, Method: Composition-based stats.
Identities = 43/220 (19%), Positives = 83/220 (37%), Gaps = 19/220 (8%)
Query: 15 ALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCK 74
L + G V LL L+ ++ ++ F EF S + +
Sbjct: 3 DLLSKGGPLV----WLLLCCFGLALAIFAERLAYFHRASLNVGEFLAGLASLIRRKNFSE 58
Query: 75 SLKN--HHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKL 132
+L+ + + + +A+ ++++ ++ A E+ + L
Sbjct: 59 ALQECVATRVPVGRVLHAALLRHH-----------VPREQLKEIVQEAGQLEVPRLERYL 107
Query: 133 SFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYY--SNNVVSIPGIIESLISILLGLCVSI 190
S L ++ A L+G+LG + G+M F + + G+ +SLI+ LGL V+I
Sbjct: 108 SVLHGIAHAAPLIGLLGTIAGLMDTFTQLNNVNGYATPADVARGVYQSLITSALGLVVAI 167
Query: 191 PSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
PS + Y+ ++ +E E IL E S
Sbjct: 168 PSFLFYSFLAAKARHLMHDLERAGIEVVNILDDHRESAQS 207
>gi|255323307|ref|ZP_05364441.1| biopolymer transport ExbB protein [Campylobacter showae RM3277]
gi|255299599|gb|EET78882.1| biopolymer transport ExbB protein [Campylobacter showae RM3277]
Length = 209
Score = 95.6 bits (237), Expect = 5e-18, Method: Composition-based stats.
Identities = 38/198 (19%), Positives = 85/198 (42%), Gaps = 7/198 (3%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAI 87
+ +F S+L +V+++K F+ ++ LE +K ++
Sbjct: 12 MWPIFCLSVLGIAVLLEKGAYFLFTEIDATSSFKIKLCNLILEGDYAKIKEFCKGYKNSL 71
Query: 88 FMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGI 147
+A+ + + +++ ID + + A++ +L + + LG +SA +G+
Sbjct: 72 AKTALFVAENLGEGASKTQ------IDYIAEEAVSMQLTSLERRTWILGLCASASPQLGL 125
Query: 148 LGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFA 207
LG ++GM+ F ++G +V++ GI E+L + GL V+IP I + +
Sbjct: 126 LGTIVGMIKAFSGLSGGVDAPLVAV-GISEALYTTAFGLIVAIPCVIFFLMISKKIDFIL 184
Query: 208 MQMEGFANEFSAILSRQT 225
+ + F R++
Sbjct: 185 NDLNRIMSLFGRSFERRS 202
>gi|259418407|ref|ZP_05742325.1| MotA/TolQ/ExbB proton channel [Silicibacter sp. TrichCH4B]
gi|259345802|gb|EEW57646.1| MotA/TolQ/ExbB proton channel [Silicibacter sp. TrichCH4B]
Length = 321
Score = 95.6 bits (237), Expect = 5e-18, Method: Composition-based stats.
Identities = 41/196 (20%), Positives = 80/196 (40%), Gaps = 18/196 (9%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITL----RRQFREFEQLFWSGQSLETVCKSLKNHHNIG 83
I + S+++ ++I+ K + + + R+ + +G +L +
Sbjct: 124 IWAIAALSVVTLALILWKIWRLALIGAWSKGKARQAILAYEAGD--ADRALALVHGRRGV 181
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
+ + +A+ K + AR REL L L +S+
Sbjct: 182 RSKVVAAALGALKSMPEAHAREETA----------RVAKRELGSARSGLGALELISTIAP 231
Query: 144 LVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIE 201
L+G+LG V+GM+ FQ++ AG ++ + GI E+L++ G+ V+IP+S A F
Sbjct: 232 LLGLLGTVMGMIAAFQALQAAGSKADPAMLAGGIWEALLTTAAGMAVAIPASAALTWFEA 291
Query: 202 DSKKFAMQMEGFANEF 217
+ +E A
Sbjct: 292 VIDRIRRDVEDGATRL 307
>gi|33285441|emb|CAD68978.1| ExbB-related protein [Photobacterium damselae subsp. piscicida]
Length = 454
Score = 95.6 bits (237), Expect = 5e-18, Method: Composition-based stats.
Identities = 42/202 (20%), Positives = 81/202 (40%), Gaps = 29/202 (14%)
Query: 19 QMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKN 78
G+ + I+ LL I + + + N I +R+Q + K+ +
Sbjct: 262 AGGVVGQIILVLLAIGG----GIALFRGANLIKIRQQ-------------ISRQLKNPEQ 304
Query: 79 HHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSM 138
N L I E +S + ++ + I E E + + LS L +
Sbjct: 305 PSNNPLGRILSVYNKEQNRSV-----------EALELRLMETIIDEQEGLEKGLSMLKLL 353
Query: 139 SSAGLLVGILGAVLGMMGFFQSIAGYYSNN-VVSIPGIIESLISILLGLCVSIPSSIAYN 197
++ ++G+LG V GM+ FQ I + + + V GI +L++ +LGL ++P +A+N
Sbjct: 354 AALAPMLGLLGTVTGMIETFQVITQFGNGDPKVMAGGISMALVTTVLGLIAAMPLLLAHN 413
Query: 198 KFIEDSKKFAMQMEGFANEFSA 219
++ +E A
Sbjct: 414 VLGTQAENIRNILEKQGISLVA 435
>gi|298207141|ref|YP_003715320.1| MotA/TolQ/ExbB proton channel family protein [Croceibacter
atlanticus HTCC2559]
gi|83849775|gb|EAP87643.1| MotA/TolQ/ExbB proton channel family protein [Croceibacter
atlanticus HTCC2559]
Length = 246
Score = 95.6 bits (237), Expect = 5e-18, Method: Composition-based stats.
Identities = 32/199 (16%), Positives = 78/199 (39%), Gaps = 18/199 (9%)
Query: 28 ITLLFIFSILSWSVIIQKSVNF----ITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIG 83
+ ++ + IL ++ I++ + ++ ++ E SG K + +
Sbjct: 54 MGIVLLCLILGLAIAIERIIFLNLSTTNTKKLAQDVEDALNSGGV--EAAKEVCRNTKGP 111
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
+A+I+ + +S + ++ + ++ ++ + +S++ +
Sbjct: 112 VASIYYQGLDRADES-----------IEAAEKAVVAYGGVQMGQLEKNVSWISLFIALAP 160
Query: 144 LVGILGAVLGMMGFFQSIAGYYS-NNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIED 202
++G +G V+GM+ F I + GI +L++ + GL V+I I YN I
Sbjct: 161 MLGFMGTVIGMIQAFDKIEAAGDMQPSLVAGGIKVALLTTVFGLIVAIILQIFYNYIIAK 220
Query: 203 SKKFAMQMEGFANEFSAIL 221
ME + +L
Sbjct: 221 IDSIVNDMEDASITLIDML 239
>gi|114766614|ref|ZP_01445566.1| MotA/TolQ/ExbB proton channel family protein [Pelagibaca
bermudensis HTCC2601]
gi|114541154|gb|EAU44207.1| MotA/TolQ/ExbB proton channel family protein [Roseovarius sp.
HTCC2601]
Length = 222
Score = 95.6 bits (237), Expect = 5e-18, Method: Composition-based stats.
Identities = 32/184 (17%), Positives = 69/184 (37%), Gaps = 24/184 (13%)
Query: 27 IITLLFIFSILSWSVIIQKSVNFITL----RRQFREFEQLFWSGQSLETVCKSLKNHHNI 82
++ +L S+++ +V++ K F + R W L +
Sbjct: 23 VVLILVAVSVVTLAVVLYKLWQFRAAGVGRHKALRHAVDA-WDAGDEARARSELARSKSY 81
Query: 83 GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAG 142
+ ++ + +D ++ FL S++
Sbjct: 82 LKPVVELAMTRRCDTAR-----------------LDAEAETRFAKLERGFRFLDSVAQLS 124
Query: 143 LLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFI 200
L+G+ G VLGM+ FQ++ AG + + GI +L++ +GL V++P+S+ + F
Sbjct: 125 PLMGLFGTVLGMISAFQALQDAGSQVDPSILAGGIWVALMTTAVGLAVAMPTSVVLSWFE 184
Query: 201 EDSK 204
+
Sbjct: 185 TRME 188
>gi|254286393|ref|ZP_04961351.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae
AM-19226]
gi|150423560|gb|EDN15503.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae
AM-19226]
Length = 457
Score = 95.6 bits (237), Expect = 5e-18, Method: Composition-based stats.
Identities = 39/203 (19%), Positives = 81/203 (39%), Gaps = 28/203 (13%)
Query: 18 MQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLK 77
+Q G + +I +L ++ + + + TLR++ + K+ +
Sbjct: 262 LQAGGVIGNVILVLLGVGLI---IALYRGAILATLRQKIKAQL-------------KNPE 305
Query: 78 NHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGS 137
N L I E ++S + ++ + A+ E + LS L
Sbjct: 306 QPGNNPLGRILAVYNKEQQRSV-----------EALELRLLEAVVDEQNHLETGLSMLKL 354
Query: 138 MSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-VVSIPGIIESLISILLGLCVSIPSSIAY 196
+++ ++G+LG V GM+ FQ I + + + V GI +L++ + GL +IP +A+
Sbjct: 355 LAALAPMLGLLGTVTGMIETFQVITQFGNGDPKVMAGGISMALVTTVEGLIAAIPLLLAH 414
Query: 197 NKFIEDSKKFAMQMEGFANEFSA 219
N ++ +E A
Sbjct: 415 NILSAQAEAIRNILEKQGIGLVA 437
>gi|88860776|ref|ZP_01135413.1| transport protein TolQ-like [Pseudoalteromonas tunicata D2]
gi|88817371|gb|EAR27189.1| transport protein TolQ-like [Pseudoalteromonas tunicata D2]
Length = 448
Score = 95.6 bits (237), Expect = 5e-18, Method: Composition-based stats.
Identities = 37/210 (17%), Positives = 84/210 (40%), Gaps = 9/210 (4%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLET 71
S+ + G+ ++ +L F + + + + K+ L + SL
Sbjct: 235 SMLDHIKKGGI---WVLPIL-AFGVFALLIALAKAFQLWRLPQILPGLSTRLSHIFSLPA 290
Query: 72 VCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEK 131
S + A +S+M + + D+ + A+ ++
Sbjct: 291 AQASHELQGLQQQAGQAVSSMQHELLAISLNSNIGPSRDDQ----LFAALLHHKHKLEYW 346
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCVSI 190
L + ++ L+G+LG V GM+ F+ + + + + ++ GI E+L++ LGL V+I
Sbjct: 347 LGAIAITAAVSPLLGLLGTVSGMIETFKLMTLFGAGDAAAVSGGISEALVTTELGLVVAI 406
Query: 191 PSSIAYNKFIEDSKKFAMQMEGFANEFSAI 220
P+ + + +K + ++E A S +
Sbjct: 407 PALLCHALLSRRAKTYYGELESCAVNLSQL 436
>gi|153829989|ref|ZP_01982656.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae
623-39]
gi|148874525|gb|EDL72660.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae
623-39]
Length = 457
Score = 95.6 bits (237), Expect = 5e-18, Method: Composition-based stats.
Identities = 39/203 (19%), Positives = 81/203 (39%), Gaps = 28/203 (13%)
Query: 18 MQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLK 77
+Q G + +I +L ++ + + + TLR++ + K+ +
Sbjct: 262 LQAGGVIGNVILVLLGVGLI---IALYRGAILATLRQKIKAQL-------------KNPE 305
Query: 78 NHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGS 137
N L I E ++S + ++ + A+ E + LS L
Sbjct: 306 QPGNNPLGRILAVYNKEQQRSV-----------EALELRLLEAVVDEQNHLETGLSMLKL 354
Query: 138 MSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-VVSIPGIIESLISILLGLCVSIPSSIAY 196
+++ ++G+LG V GM+ FQ I + + + V GI +L++ + GL +IP +A+
Sbjct: 355 LAALAPMLGLLGTVTGMIETFQVITQFGNGDPKVMAGGISMALVTTVEGLIAAIPLLLAH 414
Query: 197 NKFIEDSKKFAMQMEGFANEFSA 219
N ++ +E A
Sbjct: 415 NILSAQAEAIRNILEKQGIGLVA 437
>gi|93005888|ref|YP_580325.1| MotA/TolQ/ExbB proton channel [Psychrobacter cryohalolentis K5]
gi|92393566|gb|ABE74841.1| MotA/TolQ/ExbB proton channel [Psychrobacter cryohalolentis K5]
Length = 244
Score = 95.6 bits (237), Expect = 5e-18, Method: Composition-based stats.
Identities = 42/206 (20%), Positives = 86/206 (41%), Gaps = 19/206 (9%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
++ L G +T + + SIL+ +II++S + E +
Sbjct: 1 MWELVKAGGWL----MTPIVLCSILALVIIIERSHTLQFNKVAPNRLR---------EQL 47
Query: 73 CKSLKNHHNIGLAAIFMSAMSEWKKSCD---KGARSPIGIQDRIDRMMDVAIARELEEIT 129
L+ + +IG + + E D G + + M + ++ ++
Sbjct: 48 ITRLRENGDIGRTQLMN--VKEKTALGDILATGLLYRQYGLESMTMHMQNRASVQVHQLE 105
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA-GYYSNNVVSIPGIIESLISILLGLCV 188
+ ++ LG++ + L+G+LG VLG++ F +I G + + G+ ++LI+ G+ V
Sbjct: 106 KNINMLGTIGAIAPLLGLLGTVLGIISSFLAITDGAMQDPTMLAAGVSQALITTAAGMIV 165
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFA 214
+IP+ +AY F Q E A
Sbjct: 166 AIPALVAYRYFQRRIIDINAQFETQA 191
>gi|221134889|ref|ZP_03561192.1| putative Tol protein [Glaciecola sp. HTCC2999]
Length = 454
Score = 95.3 bits (236), Expect = 5e-18, Method: Composition-based stats.
Identities = 48/234 (20%), Positives = 90/234 (38%), Gaps = 51/234 (21%)
Query: 3 NYGLAIMDISIFALFMQM----------GLAVKCIIT----LLFIFS--ILSWSVIIQKS 46
+G+ SI L +Q GL I+ L + ++S ++I K
Sbjct: 249 QFGIDPTGGSILGLLVQAPNLQERVEQGGLVGYIILIVGAIGLLLALERLVSLTIIKAK- 307
Query: 47 VNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSP 106
+ +Q + + F S L V K ++ P
Sbjct: 308 -----VNKQLKS--ETFSSNNPLGRVMKVKDDY--------------------------P 334
Query: 107 IGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYS 166
+ ++ + AI E+ ++ L+ + +S L+G+LG V GM+ FQ+I + +
Sbjct: 335 SADSESLELHLTEAILGEVPKLGRNLTIIKIISVVAPLMGLLGTVTGMINTFQAITLFGT 394
Query: 167 NN-VVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
+ + GI +L++ +LGL V+IP ++ Y SK ++ A A
Sbjct: 395 GDPKLMAGGISTALVTTVLGLVVAIPMTLLYAMLNTRSKNIVYILQEQAAGVIA 448
>gi|85703632|ref|ZP_01034736.1| MotA/TolQ/ExbB proton channel family protein [Roseovarius sp. 217]
gi|85672560|gb|EAQ27417.1| MotA/TolQ/ExbB proton channel family protein [Roseovarius sp. 217]
Length = 226
Score = 95.3 bits (236), Expect = 5e-18, Method: Composition-based stats.
Identities = 34/182 (18%), Positives = 70/182 (38%), Gaps = 17/182 (9%)
Query: 27 IITLLFIFSILSWSVIIQKSVNFITL---RRQFREFEQLFWSGQSLETVCKSLKNHHNIG 83
+I ++ + S+ + +V++ K F R W ++L+ +
Sbjct: 21 VIAIIGVMSVATLAVVLYKIWQFRASGVGRHLALRAAVAEWDQGQSTAARRTLEGSRSYL 80
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
I + GA + R ++ + FL +++
Sbjct: 81 APVIARA-------FATDGASDSAAV-----RRLEAEADARFSRLERGFRFLDTVAQVAP 128
Query: 144 LVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIE 201
L+G+ G VLGM+ FQ++ AG + + GI +L++ GL V++P+S+ + F
Sbjct: 129 LLGLFGTVLGMIEAFQALQSAGSQVDPSLLAGGIWVALLTTAAGLAVAMPASVVLSWFES 188
Query: 202 DS 203
Sbjct: 189 RM 190
>gi|213969766|ref|ZP_03397901.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. tomato T1]
gi|302062852|ref|ZP_07254393.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. tomato K40]
gi|213925574|gb|EEB59134.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. tomato T1]
Length = 238
Score = 95.3 bits (236), Expect = 6e-18, Method: Composition-based stats.
Identities = 47/220 (21%), Positives = 88/220 (40%), Gaps = 19/220 (8%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
I+++ L G + + + SI + +II++ R W +
Sbjct: 12 ITVWELVKSGGWM----MLPIILSSIAAAGIIIERLWTLRASRIAPPHLLGQAWQWIQEK 67
Query: 71 TV-CKSLKN-HHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ + LK + L I + ++ K + + ++ A AR + ++
Sbjct: 68 KLDNEKLKQLRADSPLGEILAAGLANSKHGR-----------EIMKECIEEAAARVIHDL 116
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGL 186
LS LGS+++ L+G+LG VLGM+ F S G +N V GI ++LI GL
Sbjct: 117 ERYLSALGSIAAMAPLLGLLGTVLGMIEIFGSFNSTGATANAGVLASGISKALICTASGL 176
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
V+IP+ + + + ME A ++ +
Sbjct: 177 IVAIPAIFFHRFLQSRVDELVVGMEQQAIRLVEVVQGDRD 216
>gi|311745870|ref|ZP_07719655.1| MotA/TolQ/ExbB proton channel family protein [Algoriphagus sp. PR1]
gi|311302436|gb|EAZ80352.2| MotA/TolQ/ExbB proton channel family protein [Algoriphagus sp. PR1]
Length = 269
Score = 95.3 bits (236), Expect = 6e-18, Method: Composition-based stats.
Identities = 37/202 (18%), Positives = 80/202 (39%), Gaps = 18/202 (8%)
Query: 28 ITLLFIFSILSWSVIIQKSVNF----ITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIG 83
+T + I IL +V +++ + ++ + E SG K +
Sbjct: 76 MTPVLICLILGLAVALERIITLNLSTTNTKKLLAKVEDALSSGGV--EAAKDVTKGTKGP 133
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
+A+IF + + + + +++ + + E+ + + L ++ S
Sbjct: 134 VASIFTQGLMRYSEG-----------IEMVEKSIIAYGSVEMGRLEKGLVWISLFISLAP 182
Query: 144 LVGILGAVLGMMGFFQSIAGYYS-NNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIED 202
++G +G V+GM+G F SI + + GI +L++ + GL V+I + YN +
Sbjct: 183 MLGFMGTVIGMIGAFDSIEAAGDISPSLVAGGIKIALLTTVAGLIVAIILQLFYNYCVAK 242
Query: 203 SKKFAMQMEGFANEFSAILSRQ 224
ME + IL +
Sbjct: 243 IDSLVNDMEDASITLVDILVKH 264
>gi|229520580|ref|ZP_04410004.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae TM
11079-80]
gi|229342404|gb|EEO07398.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae TM
11079-80]
Length = 457
Score = 95.3 bits (236), Expect = 6e-18, Method: Composition-based stats.
Identities = 39/203 (19%), Positives = 81/203 (39%), Gaps = 28/203 (13%)
Query: 18 MQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLK 77
+Q G + +I +L ++ + + + TLR++ + K+ +
Sbjct: 262 LQAGGVIGNVILVLLGVGLI---IALYRGAILATLRQKIKAQL-------------KNPE 305
Query: 78 NHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGS 137
N L I E ++S + ++ + A+ E + LS L
Sbjct: 306 QPGNNPLGRILAVYNKEQQRSV-----------EALELRLLEAVVDEQNHLETGLSMLKL 354
Query: 138 MSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-VVSIPGIIESLISILLGLCVSIPSSIAY 196
+++ ++G+LG V GM+ FQ I + + + V GI +L++ + GL +IP +A+
Sbjct: 355 LAALAPMLGLLGTVTGMIETFQVITQFGNGDPKVMAGGISMALVTTVEGLIAAIPLLLAH 414
Query: 197 NKFIEDSKKFAMQMEGFANEFSA 219
N ++ +E A
Sbjct: 415 NILSAQAEAIRNILEKQGIGLVA 437
>gi|317052096|ref|YP_004113212.1| MotA/TolQ/ExbB proton channel [Desulfurispirillum indicum S5]
gi|316947180|gb|ADU66656.1| MotA/TolQ/ExbB proton channel [Desulfurispirillum indicum S5]
Length = 455
Score = 95.3 bits (236), Expect = 6e-18, Method: Composition-based stats.
Identities = 37/151 (24%), Positives = 67/151 (44%), Gaps = 12/151 (7%)
Query: 79 HHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSM 138
H N L I A+ E + D + ++ +D I RE+ + L+ + +
Sbjct: 313 HPNNPLGRIL--ALYEENRETD---------VETMELRLDEEILREVPRLEWGLTTIKIL 361
Query: 139 SSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV-SIPGIIESLISILLGLCVSIPSSIAYN 197
++ L+G+LG V+GM+ FQ+I + + + GI ++L++ LGL V+IP +N
Sbjct: 362 AAVAPLLGLLGTVVGMIETFQAITLFGTGDPQLMAGGISQALVTTALGLVVAIPLLFLHN 421
Query: 198 KFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
S+ ME A+ + G
Sbjct: 422 LATAKSRALINTMEEQGAGLLAMHMARGRGE 452
>gi|229529414|ref|ZP_04418804.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae
12129(1)]
gi|229333188|gb|EEN98674.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae
12129(1)]
Length = 457
Score = 95.3 bits (236), Expect = 6e-18, Method: Composition-based stats.
Identities = 39/203 (19%), Positives = 81/203 (39%), Gaps = 28/203 (13%)
Query: 18 MQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLK 77
+Q G + +I +L ++ + + + TLR++ + K+ +
Sbjct: 262 LQAGGVIGNVILVLLGVGLI---IALYRGAILATLRQKIKAQL-------------KNPE 305
Query: 78 NHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGS 137
N L I E ++S + ++ + A+ E + LS L
Sbjct: 306 QPGNNPLGRILAVYNKEQQRSV-----------EALELRLLEAVVDEQNHLETGLSMLKL 354
Query: 138 MSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-VVSIPGIIESLISILLGLCVSIPSSIAY 196
+++ ++G+LG V GM+ FQ I + + + V GI +L++ + GL +IP +A+
Sbjct: 355 LAALAPMLGLLGTVTGMIETFQVITQFGNGDPKVMAGGISMALVTTVEGLIAAIPLLLAH 414
Query: 197 NKFIEDSKKFAMQMEGFANEFSA 219
N ++ +E A
Sbjct: 415 NILSAQAEAIRNILEKQGIGLVA 437
>gi|254225265|ref|ZP_04918877.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae V51]
gi|125622106|gb|EAZ50428.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae V51]
Length = 457
Score = 95.3 bits (236), Expect = 6e-18, Method: Composition-based stats.
Identities = 39/203 (19%), Positives = 81/203 (39%), Gaps = 28/203 (13%)
Query: 18 MQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLK 77
+Q G + +I +L ++ + + + TLR++ + K+ +
Sbjct: 262 LQAGGVIGNVILVLLGVGLI---IALYRGAILATLRQKIKAQL-------------KNPE 305
Query: 78 NHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGS 137
N L I E ++S + ++ + A+ E + LS L
Sbjct: 306 QPGNNPLGRILAVYNKEQQRSV-----------EALELRLLEAVVDEQNHLETGLSMLKL 354
Query: 138 MSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-VVSIPGIIESLISILLGLCVSIPSSIAY 196
+++ ++G+LG V GM+ FQ I + + + V GI +L++ + GL +IP +A+
Sbjct: 355 LAALAPMLGLLGTVTGMIETFQVITQFGNGDPKVMAGGISMALVTTVEGLIAAIPLLLAH 414
Query: 197 NKFIEDSKKFAMQMEGFANEFSA 219
N ++ +E A
Sbjct: 415 NILSAQAEAIRNILEKQGIGLVA 437
>gi|295136366|ref|YP_003587042.1| ExbB-like MotA/TolQ/ExbB family biopolymer transport protein
[Zunongwangia profunda SM-A87]
gi|294984381|gb|ADF54846.1| ExbB-like MotA/TolQ/ExbB family biopolymer transport protein
[Zunongwangia profunda SM-A87]
Length = 266
Score = 95.3 bits (236), Expect = 6e-18, Method: Composition-based stats.
Identities = 33/199 (16%), Positives = 78/199 (39%), Gaps = 18/199 (9%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITL----RRQFREFEQLFWSGQSLETVCKSLKNHHNIG 83
+ ++ + IL ++ I++ + ++ R E+ SG K + +
Sbjct: 72 MGIVLLCLILGLAIAIERIIYLNLATTNTKKLARNVEEALNSGGI--EAAKEVCRNTRGP 129
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
+A+I+ + +S + ++ + ++ ++ + +S++ +
Sbjct: 130 VASIYYQGLDRADES-----------IESAEKAVVAYGGVQMGQLEKNVSWVSLFIALAP 178
Query: 144 LVGILGAVLGMMGFFQSIAGYYS-NNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIED 202
++G +G V+GM+ F I + GI +L++ + GL V+I I YN I
Sbjct: 179 MLGFMGTVIGMIEAFDRIEAAGDMQPSLVAGGIKVALLTTVFGLIVAIILQIFYNYIIAK 238
Query: 203 SKKFAMQMEGFANEFSAIL 221
ME + +L
Sbjct: 239 IDSIVNDMEDASILLIDML 257
>gi|21231566|ref|NP_637483.1| biopolymer transport protein [Xanthomonas campestris pv. campestris
str. ATCC 33913]
gi|66768314|ref|YP_243076.1| biopolymer transport protein [Xanthomonas campestris pv. campestris
str. 8004]
gi|188991453|ref|YP_001903463.1| macromolecule import protein [Xanthomonas campestris pv. campestris
str. B100]
gi|21113252|gb|AAM41407.1| biopolymer transport protein [Xanthomonas campestris pv. campestris
str. ATCC 33913]
gi|66573646|gb|AAY49056.1| biopolymer transport protein [Xanthomonas campestris pv. campestris
str. 8004]
gi|167733213|emb|CAP51411.1| macromolecule import protein [Xanthomonas campestris pv.
campestris]
Length = 222
Score = 95.3 bits (236), Expect = 6e-18, Method: Composition-based stats.
Identities = 38/210 (18%), Positives = 83/210 (39%), Gaps = 18/210 (8%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLF--WSGQSLE 70
+ L G + L + +++ ++++++ + W+ +
Sbjct: 1 MLELVKAGGWP----MVPLLLLGVIALAIVLERLWTLRRNEVSPPGLGEEVRNWAARGKL 56
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
N L A+ +A+ +S D I ++ + +
Sbjct: 57 DPTHIESLRRNSPLGALLAAALDVRGRSRDL-----------IRERIEDTGRHVVHRMER 105
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVS 189
L+ LG+++SAG L+G+LG V+GM+ F I + +V GI ++L+ G+ ++
Sbjct: 106 YLNALGTIASAGPLLGLLGTVVGMIQMFLGILDHGVGDVNQLAGGIGKALVCTATGMIIA 165
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
+PS +A+ F + ++ME A
Sbjct: 166 VPSLMAHRFFKGRIAGYIIEMEQEATLLLD 195
>gi|225163963|ref|ZP_03726252.1| MotA/TolQ/ExbB proton channel [Opitutaceae bacterium TAV2]
gi|224801413|gb|EEG19720.1| MotA/TolQ/ExbB proton channel [Opitutaceae bacterium TAV2]
Length = 227
Score = 95.3 bits (236), Expect = 6e-18, Method: Composition-based stats.
Identities = 41/210 (19%), Positives = 85/210 (40%), Gaps = 23/210 (10%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFIT--LRRQFREFEQLFWSGQSLE 70
LF G I+ + + S L+ +V++++++ + R + ++F ++ +
Sbjct: 15 PLELFKHGGP----IMWPIIVVSFLAITVVVERALFLLRENAARDPKIAGRIFERVENHD 70
Query: 71 -TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+ +A I + A++ + S D A +REL
Sbjct: 71 VEGAVRIGEKSRDFIARILVYALTHKESSLDD--------------AFAQASSRELSRYQ 116
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGY--YSNNVVSIPGIIESLISILLGLC 187
+ L+ L + +A L+G+LG V GMM F ++ G ++ G+ E+LI+ GL
Sbjct: 117 QGLAILDTCITAAPLLGLLGTVTGMMNTFGALGGGDIAASAGQITGGVGEALIATASGLV 176
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEF 217
++I +N ++ + AN
Sbjct: 177 IAIVVLFPFNVLNTRIEQARRDIADAANAL 206
>gi|90414112|ref|ZP_01222094.1| putative biopolymer transport protein ExbB-related protein
[Photobacterium profundum 3TCK]
gi|90324784|gb|EAS41317.1| putative biopolymer transport protein ExbB-related protein
[Photobacterium profundum 3TCK]
Length = 449
Score = 95.3 bits (236), Expect = 6e-18, Method: Composition-based stats.
Identities = 42/202 (20%), Positives = 80/202 (39%), Gaps = 24/202 (11%)
Query: 19 QMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKN 78
G+ K I+ LL I +I++ + + +R+Q + +
Sbjct: 261 HGGVVGKVILGLLVIGAIIT----LFRGSKLFIIRQQIKAQLKR-------------PNE 303
Query: 79 HHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSM 138
N L I S + + ++ + AI E +EI + LS L +
Sbjct: 304 PGNNPLGRILKV------YSLGVNKKEQPRSVEALELRLLEAIVDEQQEIEKGLSMLKLL 357
Query: 139 SSAGLLVGILGAVLGMMGFFQSIAGYYSNN-VVSIPGIIESLISILLGLCVSIPSSIAYN 197
++ ++G+LG V GM+ FQ I + + + V GI +L++ +LGL ++P +A+N
Sbjct: 358 AALAPMLGLLGTVTGMIETFQVITQFGNGDPKVMAGGISTALVTTVLGLISAMPLLLAHN 417
Query: 198 KFIEDSKKFAMQMEGFANEFSA 219
+ +E A
Sbjct: 418 ILSTQADAVRNILEKQGISLVA 439
>gi|42522410|ref|NP_967790.1| adventurous gliding motility protein R [Bdellovibrio bacteriovorus
HD100]
gi|39574942|emb|CAE78783.1| Adventurous gliding motility protein R [Bdellovibrio bacteriovorus
HD100]
Length = 221
Score = 95.3 bits (236), Expect = 6e-18, Method: Composition-based stats.
Identities = 45/229 (19%), Positives = 88/229 (38%), Gaps = 25/229 (10%)
Query: 1 MNNYGLAIMDISIFA-LFMQMGLA--VKCIITLLFIFSILSWSVIIQKSVNFITLRRQFR 57
MN + + +++ F + G V +I +L +F VII++ + L +
Sbjct: 1 MNPT-VTVDNMNFIQRAFAEGGFVMYVIAVIAILALF------VIIERMMKLKNLAVDKK 53
Query: 58 EFEQLFWS---GQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRID 114
EF + L L + + + + +
Sbjct: 54 EFTDQIFRMVVAGDLRQAISYCDARP-APLTNTVKAGLVQAMNKRPD---------EEVQ 103
Query: 115 RMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGY--YSNNVVSI 172
MD A+ RE+ ++ SFL + +L G+LG ++GM+G F+++A + +
Sbjct: 104 VAMDAAVMREMPKVEGWTSFLAVFGNVAVLAGLLGTIIGMIGSFRAVAAADPATKALELS 163
Query: 173 PGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
GI +L GL V+I S +AY F +K ++ + ++
Sbjct: 164 KGISHALNCTAFGLLVAIISIVAYGLFQHRIQKTENEVVETSMSLLNLV 212
>gi|289665893|ref|ZP_06487474.1| biopolymer transport protein [Xanthomonas campestris pv. vasculorum
NCPPB702]
gi|289669016|ref|ZP_06490091.1| biopolymer transport protein [Xanthomonas campestris pv. musacearum
NCPPB4381]
Length = 220
Score = 95.3 bits (236), Expect = 6e-18, Method: Composition-based stats.
Identities = 40/212 (18%), Positives = 86/212 (40%), Gaps = 22/212 (10%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLR----RQFREFEQLFWSGQS 68
+ L G + L + +++ ++++++ + E G+
Sbjct: 1 MLELVKAGGWP----MVPLLLLGVIALAIVLERLWSLRRNEVTPPGLGEEVRNWAARGKL 56
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
T +SL+ + +G D R I++RI+ + +
Sbjct: 57 DPTHIESLRRNSPLGALLAAA---------LDVRGRPRELIRERIEDTGR----HVVHRM 103
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
L+ LG+++SAG L+G+LG V+GM+ F I + +V GI ++L+ G+
Sbjct: 104 ERYLNTLGTIASAGPLLGLLGTVVGMIQMFLGILDHGVGDVNQLAGGIGKALVCTATGMI 163
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
+++P+ +A+ F + ++ME A
Sbjct: 164 IAVPALMAHRFFKGRIAGYIIEMEQEATLLLD 195
>gi|91215089|ref|ZP_01252061.1| MotA/TolQ/ExbB proton channel family protein [Psychroflexus torquis
ATCC 700755]
gi|91186694|gb|EAS73065.1| MotA/TolQ/ExbB proton channel family protein [Psychroflexus torquis
ATCC 700755]
Length = 262
Score = 95.3 bits (236), Expect = 6e-18, Method: Composition-based stats.
Identities = 29/197 (14%), Positives = 74/197 (37%), Gaps = 14/197 (7%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG--QSLETVCKSLKNHHNIGLA 85
+ ++ + IL ++ ++ + ++ Q S K + + + +A
Sbjct: 71 MGIVLLCLILGLAIAFERIIYLNLATTNSKKLAQSVEDAMKSSGVEAAKEICRNTSGPVA 130
Query: 86 AIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLV 145
+I+ + + + ++ + ++ ++ + +S++ + ++
Sbjct: 131 SIYYQGLDRMHEGVEAS-----------EKAVVAYGGVQMGQLEKNVSWVSLFIALAPML 179
Query: 146 GILGAVLGMMGFFQSIAGYYS-NNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSK 204
G +G V+GM+ F I + GI +L++ + GL V+I + YN I
Sbjct: 180 GFMGTVIGMIQAFDKIEAAGDMQPSLVAGGIKVALLTTVFGLVVAIILQVFYNYIIAKID 239
Query: 205 KFAMQMEGFANEFSAIL 221
ME + IL
Sbjct: 240 SIVNDMEDASITLIDIL 256
>gi|91788807|ref|YP_549759.1| MotA/TolQ/ExbB proton channel [Polaromonas sp. JS666]
gi|91698032|gb|ABE44861.1| MotA/TolQ/ExbB proton channel [Polaromonas sp. JS666]
Length = 212
Score = 95.3 bits (236), Expect = 6e-18, Method: Composition-based stats.
Identities = 48/221 (21%), Positives = 91/221 (41%), Gaps = 24/221 (10%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLR----RQFREFEQLFWSGQS 68
+F++ G I L S+L+ +++I++ + T + R E + S
Sbjct: 1 MFSIIQAAGWP----IWPLLACSVLALALVIERFTSLKTPKVAPPRLLDEAITVSRSAVP 56
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
V L+ + +G + S +P +D + +++ A + ++
Sbjct: 57 APEVVSQLEQNSVLG--EVLASGFRALN-------ANPRISEDDLRSILEGAGRQAAHKL 107
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQS-------IAGYYSNNVVSIPGIIESLIS 181
L+ L +++SA L+G+LG V+GM+ F + + N V GI +L +
Sbjct: 108 ERYLAALATIASAAPLLGLLGTVIGMIEIFGAQAGAGGVSSSGGGNPVQMAQGISIALYN 167
Query: 182 ILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
GL V+IPS I + F + + ME A F L+
Sbjct: 168 TAFGLMVAIPSLIFWRYFRAQVDGYLLTMELAAERFVRHLN 208
>gi|229514950|ref|ZP_04404410.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae TMA
21]
gi|229347655|gb|EEO12614.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae TMA
21]
Length = 457
Score = 95.3 bits (236), Expect = 6e-18, Method: Composition-based stats.
Identities = 39/203 (19%), Positives = 80/203 (39%), Gaps = 28/203 (13%)
Query: 18 MQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLK 77
+Q G + +I +L + + + + TLR++ + K+ +
Sbjct: 262 LQAGGVIGNVILVLLG---VGLIIALYRGAILATLRQKIKAQL-------------KNPE 305
Query: 78 NHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGS 137
N L I E ++S + ++ + A+ E + LS L
Sbjct: 306 QPGNNPLGRILAVYNKEQQRSV-----------EALELRLLEAVVDEQNHLETGLSMLKL 354
Query: 138 MSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-VVSIPGIIESLISILLGLCVSIPSSIAY 196
+++ ++G+LG V GM+ FQ I + + + V GI +L++ + GL +IP +A+
Sbjct: 355 LAALAPMLGLLGTVTGMIETFQVITQFGNGDPKVMAGGISMALVTTVEGLIAAIPLLLAH 414
Query: 197 NKFIEDSKKFAMQMEGFANEFSA 219
N ++ +E A
Sbjct: 415 NILSAQAEAIRNILEKQGIGLVA 437
>gi|254515774|ref|ZP_05127834.1| TonB system biopolymer transport component [gamma proteobacterium
NOR5-3]
gi|219675496|gb|EED31862.1| TonB system biopolymer transport component [gamma proteobacterium
NOR5-3]
Length = 474
Score = 95.3 bits (236), Expect = 6e-18, Method: Composition-based stats.
Identities = 29/124 (23%), Positives = 59/124 (47%), Gaps = 1/124 (0%)
Query: 97 KSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMG 156
+ +P + ++ M A+ RE ++ L+ L +++ L+G+LG V GM+
Sbjct: 343 RVLKVHEDNPSMDLETLELKMSEAVMRETPKLESGLTLLKIIAAVAPLMGLLGTVTGMIV 402
Query: 157 FFQSIAGYYSNN-VVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFAN 215
FQ+I + + + GI +LI+ +LGL V+IP+ + + +++ + A
Sbjct: 403 TFQAITIFGAGDPKAMAGGISGALITTVLGLLVAIPTVLLHTLVNGRAQRIIHVLTEQAT 462
Query: 216 EFSA 219
A
Sbjct: 463 GIVA 466
>gi|300866206|ref|ZP_07110921.1| biopolymer transport protein [Oscillatoria sp. PCC 6506]
gi|300335799|emb|CBN56081.1| biopolymer transport protein [Oscillatoria sp. PCC 6506]
Length = 217
Score = 95.3 bits (236), Expect = 6e-18, Method: Composition-based stats.
Identities = 46/215 (21%), Positives = 92/215 (42%), Gaps = 22/215 (10%)
Query: 16 LFMQMGLAVKCIITLLFIFSILSWSVIIQKSVN-FITLRRQFREFEQL--FWSGQSLETV 72
LF G ++ L FS++ ++I+++ + ++RQ +Q F+ ++L
Sbjct: 6 LFTAGG----AVMWPLLGFSVVGTALIVERVRFWYRVMKRQAPVIKQALRFYQLENLVGT 61
Query: 73 CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKL 132
+ LK + ++ L IF++A+ P + R+ ++ E+ +
Sbjct: 62 IELLKQNADLPLPRIFLAALE---------LEDPNPEEFRL--ALESEAQAEIPNLKRFN 110
Query: 133 SFLGSMSSAGLLVGILGAVLGMMGFFQSIAGY---YSNNVVSIPGIIESLISILLGLCVS 189
+F ++ S L G+LG VLG++ F S+ S GI E+L+S GL V+
Sbjct: 111 NFFDTIISLSPLFGLLGTVLGLITSFASLKVGDVGGSKTAGVTSGISEALVSTASGLVVA 170
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
I + N F + ++ + + +L R
Sbjct: 171 IFIMMFANTFRGFYLRQIALIQEYCGQL-ELLYRH 204
>gi|260772794|ref|ZP_05881710.1| MotA/TolQ/ExbB proton channel family protein [Vibrio metschnikovii
CIP 69.14]
gi|260611933|gb|EEX37136.1| MotA/TolQ/ExbB proton channel family protein [Vibrio metschnikovii
CIP 69.14]
Length = 456
Score = 95.3 bits (236), Expect = 7e-18, Method: Composition-based stats.
Identities = 36/203 (17%), Positives = 79/203 (38%), Gaps = 28/203 (13%)
Query: 18 MQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLK 77
+ G + II +L + + + + + R++ ++ K +
Sbjct: 260 LDAGGVIGNIILVLLA---IGLGIAVYRGIVLAMARQR-------------IQQQLKQSE 303
Query: 78 NHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGS 137
+ N L + E +S + ++ + A+ E + + LS L
Sbjct: 304 PNSNNPLGRVLSVYDKEQNRSV-----------EALELRLLEAVVDEQAGLEKGLSMLKL 352
Query: 138 MSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-VVSIPGIIESLISILLGLCVSIPSSIAY 196
++ ++G+LG V GM+ FQ I + + + V GI +L++ +LGL ++P +A+
Sbjct: 353 FAALAPMLGLLGTVTGMIETFQVITQFGNGDPKVMAGGISMALVTTVLGLVAAMPLLLAH 412
Query: 197 NKFIEDSKKFAMQMEGFANEFSA 219
N ++ +E A
Sbjct: 413 NILSSQAETIRTILEKQGIGLVA 435
>gi|301629304|ref|XP_002943783.1| PREDICTED: protein tolQ-like [Xenopus (Silurana) tropicalis]
Length = 164
Score = 95.3 bits (236), Expect = 7e-18, Method: Composition-based stats.
Identities = 37/164 (22%), Positives = 66/164 (40%), Gaps = 12/164 (7%)
Query: 65 SGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARE 124
S + L + + N L + + + P + + M+ A
Sbjct: 4 SAKGLPALDTVSQLAQNSALGEVLATGLRTLH-------LHPQSTEADLRAAMEGAGRTV 56
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYS-----NNVVSIPGIIESL 179
+ + L+ L +++SA L+G+LG V+GM+ F S +G N GI +L
Sbjct: 57 AHRLEKYLNALATIASAAPLLGLLGTVIGMIEIFGSQSGGGGAIGSGNPAQLAHGISTAL 116
Query: 180 ISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
+ GL V+IP+ I + F + + +E A +F L R
Sbjct: 117 YNTAFGLIVAIPALIFWRYFRSRVDAYLLTLELSAEQFVRHLLR 160
>gi|229497110|ref|ZP_04390814.1| MotA/TolQ/ExbB proton channel family protein [Porphyromonas
endodontalis ATCC 35406]
gi|229316035|gb|EEN81964.1| MotA/TolQ/ExbB proton channel family protein [Porphyromonas
endodontalis ATCC 35406]
Length = 242
Score = 94.9 bits (235), Expect = 7e-18, Method: Composition-based stats.
Identities = 42/215 (19%), Positives = 91/215 (42%), Gaps = 15/215 (6%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+S++ L ++ G I+ +L + S+L + ++K + + F ++
Sbjct: 31 LSVWDLALKGGW----IMLVLLLLSLLGIYIFVKKLLQVKAAHKSDSSF---------MD 77
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
+ + + +S + + DKG I ++ A E ++
Sbjct: 78 RIKDYINTQRIDAAHNLCISVNTPESRMIDKGLMRLGRPMSDISVAIENAGNVEAGKLQT 137
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI--PGIIESLISILLGLCV 188
+ + +++++ ++G LG V GM+ F +A S+ +S+ GI E+L++ + GL V
Sbjct: 138 SMPLMATIAASAPMIGFLGTVTGMVRAFFDMANAGSSVDISLLSGGIYEALVTTVGGLIV 197
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
I + AYN + K +E + EF L+
Sbjct: 198 GIITLFAYNYLVARIDKALNVLEARSIEFMDALNE 232
>gi|77362430|ref|YP_342004.1| putative Tol protein [Pseudoalteromonas haloplanktis TAC125]
gi|76877341|emb|CAI89558.1| putative Tol protein [Pseudoalteromonas haloplanktis TAC125]
Length = 455
Score = 94.9 bits (235), Expect = 7e-18, Method: Composition-based stats.
Identities = 31/110 (28%), Positives = 59/110 (53%), Gaps = 1/110 (0%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-V 169
D ++ + AI RE+ +IT L+ + +S L+G+LG V GM+ FQ+I + + +
Sbjct: 339 DTLELKLSEAILREMPKITRNLTLIKIISVVAPLLGLLGTVTGMINTFQAITLFGTGDPK 398
Query: 170 VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
+ GI ++L++ +LGL V+IP+ Y +K + ++ + A
Sbjct: 399 LMAGGISQALVTTVLGLVVAIPTVFIYTILNTRAKSLLLILQEQSAGIIA 448
>gi|269104635|ref|ZP_06157331.1| MotA/TolQ/ExbB proton channel family protein [Photobacterium
damselae subsp. damselae CIP 102761]
gi|268161275|gb|EEZ39772.1| MotA/TolQ/ExbB proton channel family protein [Photobacterium
damselae subsp. damselae CIP 102761]
Length = 454
Score = 94.9 bits (235), Expect = 7e-18, Method: Composition-based stats.
Identities = 41/202 (20%), Positives = 81/202 (40%), Gaps = 29/202 (14%)
Query: 19 QMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKN 78
G+ + I+ LL I + + + N I +R+Q + K+ +
Sbjct: 262 AGGVVGQIILVLLAIGG----GIALFRGANLIKIRQQ-------------INRQLKNPEQ 304
Query: 79 HHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSM 138
N L I E +S + ++ + I E + + + LS L +
Sbjct: 305 PGNNPLGRILSVYNKEQNRSV-----------EALELRLMETIIDEQQGLEKGLSMLKLL 353
Query: 139 SSAGLLVGILGAVLGMMGFFQSIAGYYSNN-VVSIPGIIESLISILLGLCVSIPSSIAYN 197
++ ++G+LG V GM+ FQ I + + + V GI +L++ +LGL ++P +A+N
Sbjct: 354 AALAPMLGLLGTVTGMIETFQVITQFGNGDPKVMAGGISMALVTTVLGLIAAMPLLLAHN 413
Query: 198 KFIEDSKKFAMQMEGFANEFSA 219
++ +E A
Sbjct: 414 VLGTQAENIRNILEKQGISLVA 435
>gi|330811013|ref|YP_004355475.1| biopolymer transport protein [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327379121|gb|AEA70471.1| putative biopolymer transport protein [Pseudomonas brassicacearum
subsp. brassicacearum NFM421]
Length = 211
Score = 94.9 bits (235), Expect = 7e-18, Method: Composition-based stats.
Identities = 42/224 (18%), Positives = 88/224 (39%), Gaps = 23/224 (10%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFW---SGQSL 69
++ L G + + + SI + ++ ++ R W + L
Sbjct: 1 MWELVKSGGWM----MLPIILSSIAALGIVAERLWTLRASRVTPEHLLGQVWVWIKDKQL 56
Query: 70 ETVCKSLKN-HHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
LK + L + + ++ K + + ++ A AR + E+
Sbjct: 57 NK--DKLKELRASSPLGEVLAAGLANSKHGR-----------EIMKECIEEAAARVIHEL 103
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYY--SNNVVSIPGIIESLISILLGL 186
++ LG++++ L+G+LG VLGM+ F + G +N V GI ++LI+ GL
Sbjct: 104 ERYINTLGTIAAMSPLLGLLGTVLGMIDIFSAFTGSGMTTNAAVLAGGISKALITTAAGL 163
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
V IPS + + + ME A + ++ + +++
Sbjct: 164 MVGIPSVFFHRFLQRRVDELVVGMEQEAIKLVEVVQGDRDVDLA 207
>gi|153802650|ref|ZP_01957236.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae
MZO-3]
gi|124121823|gb|EAY40566.1| MotA/TolQ/ExbB proton channel family protein [Vibrio cholerae
MZO-3]
Length = 457
Score = 94.9 bits (235), Expect = 7e-18, Method: Composition-based stats.
Identities = 39/203 (19%), Positives = 80/203 (39%), Gaps = 28/203 (13%)
Query: 18 MQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLK 77
+Q G + +I +L + + + + TLR++ + K+ +
Sbjct: 262 LQAGGVIGNVILVLLG---VGLIIALYRGAILATLRQKIKAQL-------------KNPE 305
Query: 78 NHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGS 137
N L I E ++S + ++ + A+ E + LS L
Sbjct: 306 QPGNNPLGRILAVYNKEQQRSV-----------EALELRLLEAVVDEQNHLETGLSMLKL 354
Query: 138 MSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-VVSIPGIIESLISILLGLCVSIPSSIAY 196
+++ ++G+LG V GM+ FQ I + + + V GI +L++ + GL +IP +A+
Sbjct: 355 LAALAPMLGLLGTVTGMIETFQVITQFGNGDPKVMAGGISMALVTTVEGLIAAIPLLLAH 414
Query: 197 NKFIEDSKKFAMQMEGFANEFSA 219
N ++ +E A
Sbjct: 415 NILSAQAEAIRNILEKQGIGLVA 437
>gi|325281439|ref|YP_004253981.1| MotA/TolQ/ExbB proton channel [Odoribacter splanchnicus DSM 20712]
gi|324313248|gb|ADY33801.1| MotA/TolQ/ExbB proton channel [Odoribacter splanchnicus DSM 20712]
Length = 260
Score = 94.9 bits (235), Expect = 7e-18, Method: Composition-based stats.
Identities = 34/199 (17%), Positives = 78/199 (39%), Gaps = 18/199 (9%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE----TVCKSLKNHHNIG 83
+ + + I ++ I++ + ++F F L K +
Sbjct: 67 MACVVLCLIFGLAIAIERVIYLNLSDTNTKKFIAGFEDA--LNNGGIEAAKEYCRNTRGP 124
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
+A+IF +S + + D +++ + + ++ + + L+++G +
Sbjct: 125 VASIFYQGLSRYDQG-----------IDMVEKSVVSYGSVQMGLMEKGLTWIGLFIALAP 173
Query: 144 LVGILGAVLGMMGFFQSIAGYYS-NNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIED 202
++G LG V+GM+ F I + + GI +LI+ + GL V++ + YN +
Sbjct: 174 MLGFLGTVIGMIEAFDQIQAAGDMSPALVAGGIKVALITTVGGLIVAMILQVFYNYCVSK 233
Query: 203 SKKFAMQMEGFANEFSAIL 221
+ ME + IL
Sbjct: 234 VEGIVNNMEDASVSMLDIL 252
>gi|213964035|ref|ZP_03392278.1| MotA/TolQ/ExbB proton channel family protein [Capnocytophaga
sputigena Capno]
gi|213953317|gb|EEB64656.1| MotA/TolQ/ExbB proton channel family protein [Capnocytophaga
sputigena Capno]
Length = 224
Score = 94.9 bits (235), Expect = 7e-18, Method: Composition-based stats.
Identities = 33/197 (16%), Positives = 77/197 (39%), Gaps = 14/197 (7%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE--TVCKSLKNHHNIGLA 85
+ + + I+ +V I++ + ++ + K + +A
Sbjct: 33 MAPILLCLIIGLAVAIERIIYLNMATTNSKKLIADIEQALDSKGVEAAKEVCRDTKGPVA 92
Query: 86 AIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLV 145
+IF + R+ GI D +++ + ++ ++ + +S++ S ++
Sbjct: 93 SIFYQGLD----------RASEGI-DMVEKSVVSYGGVQMGQLEKNVSWISLFISIAPML 141
Query: 146 GILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIPSSIAYNKFIEDSK 204
G +G V+GM+ F I+ + I G I +L++ + GL V++ + YN I
Sbjct: 142 GFMGTVIGMIEAFDKISSAGGLDASLIAGDIKVALLTTVFGLIVAMILQVFYNYIIAKID 201
Query: 205 KFAMQMEGFANEFSAIL 221
ME + +L
Sbjct: 202 TIVNDMEDASISLIDLL 218
>gi|91779197|ref|YP_554405.1| biopolymer MotA/TolQ/ExbB proton channel family transporter
[Burkholderia xenovorans LB400]
gi|91691857|gb|ABE35055.1| outer membrane transport energization protein ExbB [Burkholderia
xenovorans LB400]
Length = 214
Score = 94.9 bits (235), Expect = 8e-18, Method: Composition-based stats.
Identities = 38/206 (18%), Positives = 88/206 (42%), Gaps = 21/206 (10%)
Query: 17 FMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRR-----QFREFEQLFWSGQSLET 71
+ +I L I ++L+ ++++ ++ F+ R +F + L+
Sbjct: 7 ILAAVRVGGWVIYPLTILAVLAVAIVLDRAYVFLRFGRLPVAIHAVHEIDMFGADIDLDN 66
Query: 72 VCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE-ITE 130
+ SA + +++ P + + + ++A ++E ++
Sbjct: 67 ILND-------------TSARNAFRRMNSPWQPDP-SVPLWLREVKAESVASQIERDMSR 112
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV-SIPGIIESLISILLGLCVS 189
L ++ +A L+G+LG ++GMM FQ G + G+ +SL++ +GL V+
Sbjct: 113 GFWVLETIVTAAPLLGLLGTIVGMMHSFQLFGGTGLVDPAGVTGGVAQSLVATAIGLVVA 172
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFAN 215
+ + A+N F ++ ++E FAN
Sbjct: 173 LFALFAFNYFSRRLERLMDELESFAN 198
>gi|255020854|ref|ZP_05292910.1| MotA/TolQ/ExbB proton channel [Acidithiobacillus caldus ATCC 51756]
gi|209574024|gb|ACI62950.1| TonB system transport protein ExbB2 [Acidithiobacillus caldus]
gi|254969645|gb|EET27151.1| MotA/TolQ/ExbB proton channel [Acidithiobacillus caldus ATCC 51756]
Length = 225
Score = 94.9 bits (235), Expect = 8e-18, Method: Composition-based stats.
Identities = 33/159 (20%), Positives = 67/159 (42%), Gaps = 1/159 (0%)
Query: 65 SGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSP-IGIQDRIDRMMDVAIAR 123
G+ + T S + LA I ++ ++ + R P I R+ ++ + R
Sbjct: 44 QGEQIATALDSAADLKPSTLAPIAEASPYPFRALLEVPLRFPQIRDSARLSEILQEVVMR 103
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISIL 183
++ + ++L L + + L+G+LG ++GM FQ + +N + E+L++
Sbjct: 104 QVPSLDKRLWILDTAVTLAPLLGLLGTIVGMFHAFQVLGDAANNPTAITGNVAEALLATA 163
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
GL ++I + +N + QME N L
Sbjct: 164 AGLVIAIIGLVTFNGLHNRMRLVVHQMETLRNMLVNRLE 202
>gi|119470957|ref|ZP_01613541.1| putative Tol protein [Alteromonadales bacterium TW-7]
gi|119445979|gb|EAW27259.1| putative Tol protein [Alteromonadales bacterium TW-7]
Length = 455
Score = 94.9 bits (235), Expect = 8e-18, Method: Composition-based stats.
Identities = 34/117 (29%), Positives = 62/117 (52%), Gaps = 1/117 (0%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-V 169
D ++ + AI RE+ +IT L+ + +S L+G+LG V GM+ FQ+I + + +
Sbjct: 339 DTLELKLSEAILREMPKITRNLTLIKIISVVAPLLGLLGTVTGMINTFQAITLFGTGDPK 398
Query: 170 VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+ GI ++L++ +LGL V+IP+ Y SK + ++ + A S + E
Sbjct: 399 LMAGGISQALVTTVLGLVVAIPTVFIYTLLNTRSKGLLLILQEQSAGIIAERSEKGE 455
>gi|55247873|gb|AAV48774.1| TolR [Listonella anguillarum 775]
Length = 444
Score = 94.9 bits (235), Expect = 8e-18, Method: Composition-based stats.
Identities = 40/208 (19%), Positives = 81/208 (38%), Gaps = 28/208 (13%)
Query: 18 MQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLK 77
+QMG AV II +L + + + + + + + ++
Sbjct: 254 LQMGGAVGNIILVLLG---IGLIIAFYRGFALVMTHHKIKAQLR-------------DVQ 297
Query: 78 NHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGS 137
N L + E +S + ++ + A+ E + + LS L
Sbjct: 298 KIGNNPLGRVLSVYNKEQNRSV-----------EALELRLLEAVVDEQAHLEKGLSMLKL 346
Query: 138 MSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-VVSIPGIIESLISILLGLCVSIPSSIAY 196
+++ ++G+LG V GM+ FQ I + + + V GI +L++ +LGL +IP +A+
Sbjct: 347 LAAIAPMLGLLGTVTGMIETFQVITQFGNGDPKVMAGGISMALVTTVLGLVSAIPLLLAH 406
Query: 197 NKFIEDSKKFAMQMEGFANEFSAILSRQ 224
N ++ +E A + Q
Sbjct: 407 NILSSQAENIRSILEKQGIGLVAAQAEQ 434
>gi|254442177|ref|ZP_05055653.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Verrucomicrobiae bacterium DG1235]
gi|198256485|gb|EDY80793.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Verrucomicrobiae bacterium DG1235]
Length = 439
Score = 94.9 bits (235), Expect = 8e-18, Method: Composition-based stats.
Identities = 41/210 (19%), Positives = 89/210 (42%), Gaps = 27/210 (12%)
Query: 17 FMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSL 76
Q G II LL I ++S + ++ +++Q ++ L
Sbjct: 254 INQGGEVGLVIICLLAIGLVISGVRWVSLTIVQAKMKKQLKD-----------------L 296
Query: 77 KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLG 136
+ + I + + + P + ++ +D AI +E ++ LS +
Sbjct: 297 SKPGSNPVGRI-IKVFQSFDR--------PDVSVETLELKIDEAILKETPQLEGGLSTIK 347
Query: 137 SMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-VVSIPGIIESLISILLGLCVSIPSSIA 195
+++ L+G+LG V+GM+ FQSI + + + + GI ++L++ +LGL +IP +
Sbjct: 348 ILAAIAPLLGLLGTVVGMIATFQSITLFGTGDPKLMAGGISQALVTTVLGLIAAIPLVLI 407
Query: 196 YNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
++ S + +E + A S ++
Sbjct: 408 HSFLQGISNRCIAIIEEQSAGLIASFSEKS 437
>gi|254283894|ref|ZP_04958862.1| TonB system biopolymer transport component [gamma proteobacterium
NOR51-B]
gi|219680097|gb|EED36446.1| TonB system biopolymer transport component [gamma proteobacterium
NOR51-B]
Length = 461
Score = 94.9 bits (235), Expect = 9e-18, Method: Composition-based stats.
Identities = 28/135 (20%), Positives = 62/135 (45%), Gaps = 4/135 (2%)
Query: 97 KSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMG 156
+ +P + ++ M + +E ++ L+ L +++ L+G+LG V GM+
Sbjct: 329 RVLKLHEDNPSMDPETLELKMAEGVLKETPKLESGLTLLKIIAAVAPLMGLLGTVTGMII 388
Query: 157 FFQSIAGYYSNN-VVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFAN 215
FQ+I + + + GI +L++ +LGL V+IP+ + + +++ + A
Sbjct: 389 TFQAITIFGAGDPKAMAGGISGALVTTVLGLLVAIPTVLLHTVVNGRAQRVIHVLNEQAT 448
Query: 216 EFSAILSRQTEGNIS 230
I++ E S
Sbjct: 449 ---GIVAEHAEAEHS 460
>gi|119475460|ref|ZP_01615813.1| MotA/TolQ/ExbB proton channel family protein [marine gamma
proteobacterium HTCC2143]
gi|119451663|gb|EAW32896.1| MotA/TolQ/ExbB proton channel family protein [marine gamma
proteobacterium HTCC2143]
Length = 464
Score = 94.9 bits (235), Expect = 9e-18, Method: Composition-based stats.
Identities = 42/204 (20%), Positives = 83/204 (40%), Gaps = 29/204 (14%)
Query: 17 FMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSL 76
F Q G K I L ++++ I + + + + R KS
Sbjct: 280 FEQGGTIGKAIA--LVGA--FAFALAIWRLLVLTLMNSKVRA-------------QMKSG 322
Query: 77 KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLG 136
K + N L + +P + ++ + AI +E+ +I L+ L
Sbjct: 323 KANINNPLGRVL-----------KVHEENPTMDTETLELKLSEAIMKEVPKIELGLNLLK 371
Query: 137 SMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-VVSIPGIIESLISILLGLCVSIPSSIA 195
+++ L+G+LG V GM+ FQ+I + + + GI +L++ +LGL V+IP+ +
Sbjct: 372 IIAAVAPLMGLLGTVTGMIITFQAITIFGAGDPKAMAGGISGALVTTVLGLLVAIPTVLL 431
Query: 196 YNKFIEDSKKFAMQMEGFANEFSA 219
+ +KK ++ + A
Sbjct: 432 HTVTNGQAKKVIHVLDEQSTGLIA 455
>gi|323492747|ref|ZP_08097891.1| Tol R/Q protein [Vibrio brasiliensis LMG 20546]
gi|323313122|gb|EGA66242.1| Tol R/Q protein [Vibrio brasiliensis LMG 20546]
Length = 451
Score = 94.9 bits (235), Expect = 9e-18, Method: Composition-based stats.
Identities = 39/214 (18%), Positives = 88/214 (41%), Gaps = 31/214 (14%)
Query: 18 MQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLK 77
+Q G AV +I L +L + + + ++ R++ R+ +
Sbjct: 258 LQAGGAVGKVILGLLAVGLL---IALVRGISLSVARQKIRQQLKT--------------- 299
Query: 78 NHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGS 137
+ +S + K ++ + ++ + A+ E + + LS L
Sbjct: 300 --PQVPTNNPLGRVLSVYSKGKNQ-------TVEALELRLLEAVVDEQASLEKGLSMLKL 350
Query: 138 MSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-VVSIPGIIESLISILLGLCVSIPSSIAY 196
+++ ++G+LG V GM+ FQ I + + + V GI +L++ +LGL ++P +A+
Sbjct: 351 LAALAPMLGLLGTVTGMIETFQVITQFGNGDPKVMAGGISMALVTTVLGLIAAMPLLLAH 410
Query: 197 NKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
N ++ +E A+++ Q E +
Sbjct: 411 NILSAQAESIRNILEKQG---IALVAEQAEKEST 441
>gi|328471717|gb|EGF42594.1| biopolymer transport protein ExbB [Vibrio parahaemolyticus 10329]
Length = 453
Score = 94.9 bits (235), Expect = 9e-18, Method: Composition-based stats.
Identities = 31/117 (26%), Positives = 57/117 (48%), Gaps = 1/117 (0%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-V 169
+ ++ +D I R I +S + +S L+G+LG V+GM+G FQ+I + + +
Sbjct: 333 EDLEAKLDEIILRNAPSIERFISSIKLFASVAPLLGLLGTVMGMIGTFQAITLFGTGDPK 392
Query: 170 VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+ GI E+L++ +LGL V+IP Y ++ +E + F A +
Sbjct: 393 LMAGGISEALVTTMLGLVVAIPLLFLYTIVHSKGRRLVQTLEEQSAGFIARYQEKLH 449
>gi|325920378|ref|ZP_08182309.1| biopolymer transport protein [Xanthomonas gardneri ATCC 19865]
gi|325549125|gb|EGD20048.1| biopolymer transport protein [Xanthomonas gardneri ATCC 19865]
Length = 220
Score = 94.9 bits (235), Expect = 9e-18, Method: Composition-based stats.
Identities = 39/210 (18%), Positives = 86/210 (40%), Gaps = 18/210 (8%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFIT--LRRQFREFEQLFWSGQSLE 70
+ L G + L + +++ ++++++ + + E W+ +
Sbjct: 1 MLELVKAGGWP----MVPLLLLGVIALAIVLERLWSLRRNEVTPPGLGAEVRNWAARGKL 56
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
N L A+ + + D R I++RI+ + +
Sbjct: 57 DPGHIESLRRNSPLGALLAA-------ALDVRGRPRELIRERIEDTGRHVVH----RMER 105
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVS 189
L+ LG+++SAG L+G+LG V+GM+ F I + +V GI ++L+ G+ ++
Sbjct: 106 YLNALGTIASAGPLLGLLGTVVGMIQMFMGILDHGVGDVNQLAGGIGKALVCTATGMIIA 165
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
+P+ +A+ F + ++ME A
Sbjct: 166 VPALMAHRFFKGRIAGYIIEMEQEATLLLD 195
>gi|78777739|ref|YP_394054.1| MotA/TolQ/ExbB proton channel [Sulfurimonas denitrificans DSM 1251]
gi|78498279|gb|ABB44819.1| MotA/TolQ/ExbB proton channel [Sulfurimonas denitrificans DSM 1251]
Length = 146
Score = 94.9 bits (235), Expect = 9e-18, Method: Composition-based stats.
Identities = 28/102 (27%), Positives = 53/102 (51%), Gaps = 1/102 (0%)
Query: 115 RMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA-GYYSNNVVSIP 173
R+ ++++ + ++L L + + +G+ G VLG++ F +++ G +
Sbjct: 45 RVHELSMIEVRILLEKRLGVLATFGNNAPFIGLFGTVLGIINAFHTLSRGSEFGVNAVMG 104
Query: 174 GIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFAN 215
GI E+L++ GL V+IPS IAYN F+ K + M A+
Sbjct: 105 GISEALVATATGLFVAIPSVIAYNYFVRKIKMILLDMGAKAS 146
>gi|330973873|gb|EGH73939.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. aceris str.
M302273PT]
Length = 225
Score = 94.5 bits (234), Expect = 9e-18, Method: Composition-based stats.
Identities = 46/218 (21%), Positives = 87/218 (39%), Gaps = 19/218 (8%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
++ L G + + + SI + +II++ R W + +
Sbjct: 1 MWELVKSGGWM----MLPIILSSIAAAGIIIERLWTLRASRITPPHLLGQVWQWIQEQKL 56
Query: 73 -CKSLKN-HHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
+ LK + L I + ++ + + + ++ A AR + E+
Sbjct: 57 DSEKLKQLRADSPLGEILAAGLANSRHGR-----------EIMKECIEEAAARVIHELER 105
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGLCV 188
LS LGS+++ L+G+LG VLGM+ F S +G +N V GI ++LI GL V
Sbjct: 106 YLSALGSIAAMAPLLGLLGTVLGMIDIFGSFNSSGATANAGVLAGGISKALICTASGLIV 165
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ + + + ME A ++ +
Sbjct: 166 AIPAIFFHRFLQSHVDELVVGMEQQAIRLVEVVQGDRD 203
>gi|254506695|ref|ZP_05118835.1| MotA/TolQ/ExbB proton channel family protein [Vibrio
parahaemolyticus 16]
gi|219550276|gb|EED27261.1| MotA/TolQ/ExbB proton channel family protein [Vibrio
parahaemolyticus 16]
Length = 454
Score = 94.5 bits (234), Expect = 9e-18, Method: Composition-based stats.
Identities = 38/203 (18%), Positives = 78/203 (38%), Gaps = 28/203 (13%)
Query: 18 MQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLK 77
+ G V II L + + + + V+ R++ + KS
Sbjct: 257 LNAGGVVGKIILGLLA---IGLIIALVRGVSLFIARQKIVKQL-------------KSPS 300
Query: 78 NHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGS 137
+ L I + +S + ++ + + E + + LS L
Sbjct: 301 QPSDNPLGRILSVYQKDKHRSV-----------EALELRLLEVVVDEQTHLEKGLSMLKL 349
Query: 138 MSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-VVSIPGIIESLISILLGLCVSIPSSIAY 196
+++ ++G+LG V GM+ FQ I + +++ V GI +L++ +LGL ++P +A+
Sbjct: 350 LAALAPMLGLLGTVTGMIETFQVITQFGNSDPKVMAGGISMALVTTVLGLVAAMPLLLAH 409
Query: 197 NKFIEDSKKFAMQMEGFANEFSA 219
N S+ +E A
Sbjct: 410 NLLSSQSENIRHILEKQGIGLVA 432
>gi|209964129|ref|YP_002297044.1| MotA [Rhodospirillum centenum SW]
gi|209957595|gb|ACI98231.1| MotA [Rhodospirillum centenum SW]
Length = 463
Score = 94.5 bits (234), Expect = 9e-18, Method: Composition-based stats.
Identities = 29/110 (26%), Positives = 59/110 (53%), Gaps = 1/110 (0%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-V 169
+ ++ +D AI +E+ ++ +S + ++ L+G+LG V GM+ FQ+I + + +
Sbjct: 341 ETLELKLDEAILKEIPKLERGISTIKVFAAIAPLLGLLGTVTGMIKTFQAITLFGTGDPK 400
Query: 170 VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
+ GI E+L++ +LGL V+IP + Y+ +K +E + A
Sbjct: 401 LMAGGISEALVTTVLGLVVAIPMVLLYSLCAGRAKSVIEVLEEQSAGLIA 450
>gi|238926747|ref|ZP_04658507.1| MotA/TolQ/ExbB proton channel [Selenomonas flueggei ATCC 43531]
gi|238885279|gb|EEQ48917.1| MotA/TolQ/ExbB proton channel [Selenomonas flueggei ATCC 43531]
Length = 221
Score = 94.5 bits (234), Expect = 1e-17, Method: Composition-based stats.
Identities = 41/201 (20%), Positives = 79/201 (39%), Gaps = 20/201 (9%)
Query: 14 FALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITL---RRQFREFEQLFWSGQSLE 70
A F Q G+ ++ L I SI + I+++ F R F + + E
Sbjct: 8 IAFFQQGGI----VMYFLTIASIFVVFIGIERAFYFSRADAGRAFAHAFMLDIANARYAE 63
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
+ L +A I SA++ D++ M++ L ++
Sbjct: 64 ALA--LARDRRGAIADILFSAIT-----------KNSSRADQMSSYMEIQSGIALSKMRR 110
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSI 190
++ +L + + L+G+LG + GM+ F GI E+LI+ +GLCV++
Sbjct: 111 RIYYLSVIVTMAPLLGLLGTISGMITTFSVFNIQAGEPTAITGGIGEALIATAMGLCVAL 170
Query: 191 PSSIAYNKFIEDSKKFAMQME 211
+ + + F + + ME
Sbjct: 171 IALMVHAYFSQRIENIVTDME 191
>gi|32474156|ref|NP_867150.1| TolQ-type transport protein [Rhodopirellula baltica SH 1]
gi|32444693|emb|CAD74695.1| probable TolQ-type transport protein [Rhodopirellula baltica SH 1]
Length = 276
Score = 94.5 bits (234), Expect = 1e-17, Method: Composition-based stats.
Identities = 39/219 (17%), Positives = 86/219 (39%), Gaps = 11/219 (5%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLET 71
SI+++ G+ I+ +L FSI + +++ +S+ Q + E
Sbjct: 31 SIWSIVTSGGIPGLMILFVLLSFSIAAVYLVVDQSLALR---------CQDVVPDKLSEE 81
Query: 72 VCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEK 131
V +L++ + S G +++ ++ A+ + + +
Sbjct: 82 VAAALQSSRVAEAETLLRQKPSVLAGIIAVGLNHREYGWPEVEKSVEDALVDQSSRMLRR 141
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGY--YSNNVVSIPGIIESLISILLGLCVS 189
+ +L +++ +VG+LG V GM+ F+ +A + GI ++L++ + GL V+
Sbjct: 142 IDYLAMIANLAPMVGLLGTVTGMIFAFRQVAATRGVAGAGDLAEGIYQALVTTVGGLLVA 201
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
IP+ A + A+ A L R+
Sbjct: 202 IPALAASGVLRNRVDALLSDVTMHADRALAPLRRRAAAT 240
>gi|255264187|ref|ZP_05343529.1| MotA/TolQ/ExbB proton channel family domain protein [Thalassiobium
sp. R2A62]
gi|255106522|gb|EET49196.1| MotA/TolQ/ExbB proton channel family domain protein [Thalassiobium
sp. R2A62]
Length = 210
Score = 94.5 bits (234), Expect = 1e-17, Method: Composition-based stats.
Identities = 46/197 (23%), Positives = 78/197 (39%), Gaps = 29/197 (14%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITL----RRQFREFEQLFWSGQS 68
++A+F G V +L SI+S +VI+ K F+ L R W
Sbjct: 11 LWAIFDLGGPVV----AILIALSIVSLAVILWKLWQFMALGVGHHRDITRAMTN-WDHAQ 65
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
E +L N +AA + +KS ++ + L +
Sbjct: 66 PEEAKHALIQSKN-AMAAALVRGDDTTQKSR-----------------VEAGASAHLTRL 107
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGL 186
L S++ L+G+ G VLGM+ FQ++ AG + + GI +L++ GL
Sbjct: 108 EGGFRILDSIAQIAPLLGLFGTVLGMIDAFQALQDAGNSVDPSLLAGGIWVALLTTAAGL 167
Query: 187 CVSIPSSIAYNKFIEDS 203
V++P+S+A F
Sbjct: 168 AVAMPTSLALTYFDSRV 184
>gi|255021244|ref|ZP_05293294.1| MotA/TolQ/ExbB proton channel [Acidithiobacillus caldus ATCC 51756]
gi|209574036|gb|ACI62956.1| TonB system transport protein ExbB4 [Acidithiobacillus caldus]
gi|254969359|gb|EET26871.1| MotA/TolQ/ExbB proton channel [Acidithiobacillus caldus ATCC 51756]
Length = 228
Score = 94.5 bits (234), Expect = 1e-17, Method: Composition-based stats.
Identities = 23/185 (12%), Positives = 65/185 (35%), Gaps = 12/185 (6%)
Query: 42 IIQKSVNFITLRRQFREFEQLFWSGQSL--ETVCKSLKNHHNIGLAAIFMSAMSEWKKSC 99
++ + + + L E + + + ++ E
Sbjct: 31 MVDRFWYLRRTIVRGDAIVHEVANQGRLNREQLHELAQRAGDLP----------EGVLLR 80
Query: 100 DKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQ 159
A + + + ++ ++ + +L L ++ + L+G+ G ++GM F
Sbjct: 81 MAAAHAGQVKGEALASRLEESVITLAPNLDRRLWLLDTIITLAPLLGLFGTIIGMFHAFH 140
Query: 160 SIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
+A G+ ++L++ GL ++I +A+N F ++ +Q++
Sbjct: 141 VLAAPGHAPTEVTGGVADALVATASGLFIAILGLLAFNGFNNQVRQILLQLDSVKTMLIN 200
Query: 220 ILSRQ 224
+ Q
Sbjct: 201 RMDGQ 205
>gi|315123542|ref|YP_004065548.1| putative Tol protein [Pseudoalteromonas sp. SM9913]
gi|315017302|gb|ADT70639.1| putative Tol protein [Pseudoalteromonas sp. SM9913]
Length = 455
Score = 94.5 bits (234), Expect = 1e-17, Method: Composition-based stats.
Identities = 48/231 (20%), Positives = 94/231 (40%), Gaps = 45/231 (19%)
Query: 3 NYGLAIMDISIFALFMQM---------GLAVKCIITLLFIFSILSWSVIIQKSVNFI--- 50
+ L SI L +Q G AV +I + + ++L + +++ V+ +
Sbjct: 249 PFALDPTGGSILGLLVQAPDTSEQVHQGGAVGYVILGVGLLALL---IALERFVSLMLMG 305
Query: 51 -TLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGI 109
+RRQ ++ + L + + P
Sbjct: 306 GKIRRQLKD-----------------DTPRDDNPLGRVM-----------KVKDQYPNVA 337
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN- 168
D ++ + AI RE+ +IT L+ + +S L+G+LG V GM+ FQ+I + + +
Sbjct: 338 YDTLELKLSEAILREMPKITRNLTLIKIISVVAPLLGLLGTVTGMINTFQAITLFGTGDP 397
Query: 169 VVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
+ GI ++L++ +LGL V+IP+ Y SK + ++ + A
Sbjct: 398 KLMAGGISQALVTTVLGLVVAIPTVFLYTLLNTRSKGLLLILQEQSAGIIA 448
>gi|332994434|gb|AEF04489.1| putative Tol protein [Alteromonas sp. SN2]
Length = 455
Score = 94.5 bits (234), Expect = 1e-17, Method: Composition-based stats.
Identities = 46/227 (20%), Positives = 93/227 (40%), Gaps = 37/227 (16%)
Query: 3 NYGLAIMDISIFALFMQM---------GLAVKCIITLLFIFSILSWSVIIQKSVNFITLR 53
+G+ SI L +Q G V II ++ F +L + I++ + +R
Sbjct: 250 QFGIDPTGGSILGLLVQAPNLKERVEQGGVVGYIILIVGAFGLL---LAIERLITLSLIR 306
Query: 54 RQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRI 113
+ + + K +K ++ +G + P + +
Sbjct: 307 MKVNKQLKS-----------KEVKTNNPLG-------------RVLKVRDEHPNADVEAL 342
Query: 114 DRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-VVSI 172
+ + AI E+ ++ L+ + +S L+G+LG V GM+ FQ+I + + + +
Sbjct: 343 ELHLTEAILGEVPKLGRNLTIIKIISVVAPLMGLLGTVTGMINTFQAITLFGTGDPKLMA 402
Query: 173 PGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
GI +L++ +LGL V+IP ++ Y SK ++ A+ A
Sbjct: 403 GGISTALVTTVLGLVVAIPMTLLYAMLNTRSKNIVYILQEQASGVIA 449
>gi|292670183|ref|ZP_06603609.1| conserved hypothetical protein [Selenomonas noxia ATCC 43541]
gi|292648135|gb|EFF66107.1| conserved hypothetical protein [Selenomonas noxia ATCC 43541]
Length = 229
Score = 94.5 bits (234), Expect = 1e-17, Method: Composition-based stats.
Identities = 39/201 (19%), Positives = 78/201 (38%), Gaps = 20/201 (9%)
Query: 14 FALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITL---RRQFREFEQLFWSGQSLE 70
F G+ ++ L SI + I+++ F + R F + + +
Sbjct: 8 IEFFRHGGI----VMYFLLAASIFVVFIGIERTFYFSRMDAGRAFAHAFMLDVANAKFKD 63
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
V L +A I SA+++ K+ K + M++ L ++
Sbjct: 64 AVA--LTESRRGAIADILFSAIAKNSKNSRK-----------MSSYMEIQSGIALSKLRN 110
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSI 190
++ +L + + L+G+LG + GM+ F G+ E+LI+ +GLCV+I
Sbjct: 111 RMYYLSVIVTMAPLLGLLGTISGMISTFSVFNIEAGEPSAITGGVGEALIATAMGLCVAI 170
Query: 191 PSSIAYNKFIEDSKKFAMQME 211
+ + F + + ME
Sbjct: 171 IALSVHAYFSQRIENIVTDME 191
>gi|217975308|ref|YP_002360059.1| MotA/TolQ/ExbB proton channel [Shewanella baltica OS223]
gi|217500443|gb|ACK48636.1| MotA/TolQ/ExbB proton channel [Shewanella baltica OS223]
Length = 308
Score = 94.5 bits (234), Expect = 1e-17, Method: Composition-based stats.
Identities = 39/200 (19%), Positives = 80/200 (40%), Gaps = 17/200 (8%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITL----RRQFREFEQLFWSGQSLETVCKSLKNHHN 81
++ +L + S+++ ++++ K + F R+ R+ L+ G+ E + L
Sbjct: 88 TVVVILLLMSLVAMTIVLMKLIQFQRAGLWQRKPARQALALWQQGKQEEAL--QLAAVSR 145
Query: 82 IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSA 141
A A+ + + + ++ L ++ L L + S
Sbjct: 146 NPTAQAMAQAIRGITRQLPESLVR--------EEVLRYGCNA-LFQLRRGLRPLEVIGSL 196
Query: 142 GLLVGILGAVLGMMGFFQSIAGYYS--NNVVSIPGIIESLISILLGLCVSIPSSIAYNKF 199
L+G+LG V+GM+ FQ + + N + GI E+L++ +GLCV+IP N
Sbjct: 197 SPLLGLLGTVMGMIAAFQQLQAAGNKVNPAILSGGIWEALLTTAVGLCVAIPVVALLNYL 256
Query: 200 IEDSKKFAMQMEGFANEFSA 219
A +M+ +
Sbjct: 257 ERRVDHLAHEMDNLVTQLFT 276
>gi|148260460|ref|YP_001234587.1| MotA/TolQ/ExbB proton channel [Acidiphilium cryptum JF-5]
gi|326403653|ref|YP_004283735.1| putative MotA/TolQ/ExbB proton channel [Acidiphilium multivorum
AIU301]
gi|146402141|gb|ABQ30668.1| outer membrane transport energization protein ExbB [Acidiphilium
cryptum JF-5]
gi|325050515|dbj|BAJ80853.1| putative MotA/TolQ/ExbB proton channel [Acidiphilium multivorum
AIU301]
Length = 223
Score = 94.5 bits (234), Expect = 1e-17, Method: Composition-based stats.
Identities = 30/189 (15%), Positives = 68/189 (35%), Gaps = 12/189 (6%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLA 85
++ +L +++ +VII + G S+ ++ + LA
Sbjct: 15 GVLYVLAGLFVIAVAVIIDRMWYLRRA----------ILRGGSIVRRMAAMGRVNEQDLA 64
Query: 86 AI--FMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
A+ F M E ++ MD AI + ++ L ++ +
Sbjct: 65 ALRDFAGRMPEGLLLDTALNHMNDADHAGMNSRMDEAIMLVAPRLDRRMWVLDTIVTLAP 124
Query: 144 LVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDS 203
L+G+ G ++GM F +A G+ ++L++ G+ +++ +N
Sbjct: 125 LLGLFGTIIGMFHAFSILATPGHAPAEVTGGVADALVATACGIFIAMIGLATFNMLQNQV 184
Query: 204 KKFAMQMEG 212
+ Q+E
Sbjct: 185 RLIIHQLET 193
>gi|312961639|ref|ZP_07776137.1| MotA/TolQ/ExbB proton channel [Pseudomonas fluorescens WH6]
gi|311283898|gb|EFQ62481.1| MotA/TolQ/ExbB proton channel [Pseudomonas fluorescens WH6]
Length = 221
Score = 94.5 bits (234), Expect = 1e-17, Method: Composition-based stats.
Identities = 44/222 (19%), Positives = 88/222 (39%), Gaps = 23/222 (10%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFW---SGQ 67
+++ L G + + + SI + ++ ++ R W +
Sbjct: 9 FTVWELVKSGGWM----MLPIILSSIAALGIVAERLWTLRASRVTPEHLLGQVWGWIKNK 64
Query: 68 SLETVCKSLKN-HHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
L+ + LK + L I + ++ K + + ++ A AR +
Sbjct: 65 QLDK--EKLKALRADSPLGEILAAGLANSKHGR-----------EIMKECIEEAAARVIH 111
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYY--SNNVVSIPGIIESLISILL 184
E+ ++ LG++++ L+G+LG VLGM+ F S G +N V GI ++LI+
Sbjct: 112 ELERYINALGTIAAMAPLLGLLGTVLGMIDIFSSFMGSGMSTNAAVLAGGISKALITTAA 171
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
GL V IPS + + + ME A + ++ +
Sbjct: 172 GLMVGIPSVFFHRFLQRRIDELVVGMEQEAIKLVEVVQGDRD 213
>gi|88857265|ref|ZP_01131908.1| putative Tol protein [Pseudoalteromonas tunicata D2]
gi|88820462|gb|EAR30274.1| putative Tol protein [Pseudoalteromonas tunicata D2]
Length = 455
Score = 94.5 bits (234), Expect = 1e-17, Method: Composition-based stats.
Identities = 33/110 (30%), Positives = 60/110 (54%), Gaps = 1/110 (0%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-V 169
D ++ + AI RE+ +IT L+F+ +S L+G+LG V GM+ FQ+I + + +
Sbjct: 339 DTLELKLSEAILREMPKITRNLTFIKIISVVAPLLGLLGTVTGMINTFQAITLFGTGDPK 398
Query: 170 VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
+ GI ++L++ +LGL V+IP+ Y SK + ++ + A
Sbjct: 399 LMAGGISQALVTTVLGLVVAIPTVFVYTILNTRSKNLLLILQEQSAGIIA 448
>gi|315180093|gb|ADT87007.1| biopolymer transport protein ExbB-related protein [Vibrio furnissii
NCTC 11218]
Length = 455
Score = 94.5 bits (234), Expect = 1e-17, Method: Composition-based stats.
Identities = 39/202 (19%), Positives = 78/202 (38%), Gaps = 29/202 (14%)
Query: 19 QMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKN 78
G+ K I+ LL + + + + V R++ + K+
Sbjct: 262 AGGVIGKIILVLLA----VGLIIGVYRGVVLAIARQKIKAQL-------------KTPNQ 304
Query: 79 HHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSM 138
N L I E +S + ++ + A+ E + + LS L +
Sbjct: 305 PGNNPLGRILSVYNKEQNRSV-----------EALELRLLEAVVDEQTGLEKGLSMLKLL 353
Query: 139 SSAGLLVGILGAVLGMMGFFQSIAGYYSNN-VVSIPGIIESLISILLGLCVSIPSSIAYN 197
++ ++G+LG V GM+ FQ I + + + V GI +L++ +LGL ++P +A+N
Sbjct: 354 AALAPMLGLLGTVTGMIETFQVITQFGNGDPKVMAGGISMALVTTVLGLVAAMPLLLAHN 413
Query: 198 KFIEDSKKFAMQMEGFANEFSA 219
++ +E A
Sbjct: 414 ILSTQAENIRNILEKQGIGLVA 435
>gi|325917581|ref|ZP_08179781.1| biopolymer transport protein [Xanthomonas vesicatoria ATCC 35937]
gi|325536215|gb|EGD08011.1| biopolymer transport protein [Xanthomonas vesicatoria ATCC 35937]
Length = 219
Score = 94.5 bits (234), Expect = 1e-17, Method: Composition-based stats.
Identities = 38/214 (17%), Positives = 83/214 (38%), Gaps = 28/214 (13%)
Query: 14 FALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFIT-------LRRQFREFEQLFWSG 66
L G + L + +++ ++++++ L + R W+
Sbjct: 1 MELVKAGGWP----MVPLLLLGVIALAIVLERLWTLRRNEVTPPGLGEEVRN-----WAA 51
Query: 67 QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
+ N L A+ +A+ + D I ++ +
Sbjct: 52 RGKLDPTHIESLRRNSPLGALLAAALDVRGRPRDL-----------IRERIEDTGRHVVH 100
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLG 185
+ L+ LG+++SAG L+G+LG V+GM+ F I + +V GI ++L+ G
Sbjct: 101 RMERYLNALGTIASAGPLLGLLGTVVGMIQMFLGILDHGVGDVNQLAGGIGKALVCTATG 160
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
+ +++P+ +A+ F + ++ME A
Sbjct: 161 MIIAVPALMAHRFFKGRIAGYIIEMEQEATLLLD 194
>gi|254786553|ref|YP_003073982.1| transporter MotA/TolQ/ExbB proton channel family [Teredinibacter
turnerae T7901]
gi|237686534|gb|ACR13798.1| transporter, MotA/TolQ/ExbB proton channel family [Teredinibacter
turnerae T7901]
Length = 217
Score = 94.5 bits (234), Expect = 1e-17, Method: Composition-based stats.
Identities = 41/197 (20%), Positives = 82/197 (41%), Gaps = 16/197 (8%)
Query: 40 SVIIQKSVNFI----TLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEW 95
++I+ K + F G+ + + L + A + SA++ +
Sbjct: 27 AIILVKLWQAFQYRPAANAHPEQVLGHFEKGEWQQALL--LSKNQRNARALVMASALNAF 84
Query: 96 KKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMM 155
D+G+ ++ + R+ E+EE L L ++ L+G+ G VLGM+
Sbjct: 85 ----DQGSLGEADVRAEVGRVARN----EIEEQQRYLRVLEVVAMVAPLLGLFGTVLGMI 136
Query: 156 GFFQSI--AGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGF 213
FQ++ AG N V GI ++L++ +GL V+IP SIA++ + A +
Sbjct: 137 SAFQAMEDAGAQVNPSVLSGGIWKALMTTAVGLAVAIPVSIAHSWLERRVENLAHHISDD 196
Query: 214 ANEFSAILSRQTEGNIS 230
++ +++
Sbjct: 197 VQRLFTAFHQRNAQHLA 213
>gi|269965896|ref|ZP_06179989.1| putative TolR [Vibrio alginolyticus 40B]
gi|269829449|gb|EEZ83690.1| putative TolR [Vibrio alginolyticus 40B]
Length = 453
Score = 94.5 bits (234), Expect = 1e-17, Method: Composition-based stats.
Identities = 31/117 (26%), Positives = 57/117 (48%), Gaps = 1/117 (0%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-V 169
+ ++ +D I R I +S + +S L+G+LG V+GM+G FQ+I + + +
Sbjct: 333 EDLEAKLDEIILRNAPSIERFISSIKLFASVAPLLGLLGTVMGMIGTFQAITLFGTGDPK 392
Query: 170 VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+ GI E+L++ +LGL V+IP Y ++ +E + F A +
Sbjct: 393 LMAGGISEALVTTMLGLVVAIPLLFLYTIVHSKGRRLVQTLEEQSAGFIARYQEKLH 449
>gi|28896940|ref|NP_796545.1| putative TolR [Vibrio parahaemolyticus RIMD 2210633]
gi|153837881|ref|ZP_01990548.1| TolR [Vibrio parahaemolyticus AQ3810]
gi|260365871|ref|ZP_05778365.1| biopolymer transport protein [Vibrio parahaemolyticus K5030]
gi|260877842|ref|ZP_05890197.1| biopolymer transport protein [Vibrio parahaemolyticus AN-5034]
gi|260895509|ref|ZP_05904005.1| biopolymer transport protein [Vibrio parahaemolyticus Peru-466]
gi|260902533|ref|ZP_05910928.1| biopolymer transport protein [Vibrio parahaemolyticus AQ4037]
gi|28805148|dbj|BAC58429.1| putative TolR [Vibrio parahaemolyticus RIMD 2210633]
gi|149748744|gb|EDM59589.1| TolR [Vibrio parahaemolyticus AQ3810]
gi|308088587|gb|EFO38282.1| biopolymer transport protein [Vibrio parahaemolyticus Peru-466]
gi|308089863|gb|EFO39558.1| biopolymer transport protein [Vibrio parahaemolyticus AN-5034]
gi|308109699|gb|EFO47239.1| biopolymer transport protein [Vibrio parahaemolyticus AQ4037]
gi|308113413|gb|EFO50953.1| biopolymer transport protein [Vibrio parahaemolyticus K5030]
Length = 453
Score = 94.5 bits (234), Expect = 1e-17, Method: Composition-based stats.
Identities = 31/117 (26%), Positives = 57/117 (48%), Gaps = 1/117 (0%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-V 169
+ ++ +D I R I +S + +S L+G+LG V+GM+G FQ+I + + +
Sbjct: 333 EDLEAKLDEIILRNAPSIERFISSIKLFASVAPLLGLLGTVMGMIGTFQAITLFGTGDPK 392
Query: 170 VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+ GI E+L++ +LGL V+IP Y ++ +E + F A +
Sbjct: 393 LMAGGISEALVTTMLGLVVAIPLLFLYTIVHSKGRRLVQTLEEQSAGFIARYQEKLH 449
>gi|91225002|ref|ZP_01260261.1| putative TolR [Vibrio alginolyticus 12G01]
gi|91190248|gb|EAS76518.1| putative TolR [Vibrio alginolyticus 12G01]
Length = 453
Score = 94.5 bits (234), Expect = 1e-17, Method: Composition-based stats.
Identities = 31/117 (26%), Positives = 57/117 (48%), Gaps = 1/117 (0%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-V 169
+ ++ +D I R I +S + +S L+G+LG V+GM+G FQ+I + + +
Sbjct: 333 EDLEAKLDEIILRNAPSIERFISSIKLFASVAPLLGLLGTVMGMIGTFQAITLFGTGDPK 392
Query: 170 VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+ GI E+L++ +LGL V+IP Y ++ +E + F A +
Sbjct: 393 LMAGGISEALVTTMLGLVVAIPLLFLYTIVHSKGRRLVQTLEEQSAGFIARYQEKLH 449
>gi|71065875|ref|YP_264602.1| MotA/TolQ/ExbB proton channel [Psychrobacter arcticus 273-4]
gi|71038860|gb|AAZ19168.1| probable MotA/TolQ/ExbB proton channel [Psychrobacter arcticus
273-4]
Length = 214
Score = 94.5 bits (234), Expect = 1e-17, Method: Composition-based stats.
Identities = 42/206 (20%), Positives = 86/206 (41%), Gaps = 19/206 (9%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
++ L G +T + + SIL+ +II++S + E +
Sbjct: 1 MWELVKAGGWL----MTPIVLCSILALVIIIERSHTLQFNKVAPNRLR---------EQL 47
Query: 73 CKSLKNHHNIGLAAIFMSAMSEWKKSCD---KGARSPIGIQDRIDRMMDVAIARELEEIT 129
L+ + +IG + + E D G + + M + ++ ++
Sbjct: 48 ITRLRENGDIGRTQLMN--VKEKTALGDILATGLLYRQYGLESMTMHMQNRASVQVHQLE 105
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA-GYYSNNVVSIPGIIESLISILLGLCV 188
+ ++ LG++ + L+G+LG VLG++ F +I G + + G+ ++LI+ G+ V
Sbjct: 106 KNINMLGTIGAIAPLLGLLGTVLGIISSFLAITDGAMQDPTMLAAGVSQALITTAAGMIV 165
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFA 214
+IP+ +AY F Q E A
Sbjct: 166 AIPALVAYRYFQRRIIDINAQFETQA 191
>gi|21242824|ref|NP_642406.1| biopolymer transport protein [Xanthomonas axonopodis pv. citri str.
306]
gi|21108311|gb|AAM36942.1| biopolymer transport protein [Xanthomonas axonopodis pv. citri str.
306]
Length = 220
Score = 94.5 bits (234), Expect = 1e-17, Method: Composition-based stats.
Identities = 40/212 (18%), Positives = 90/212 (42%), Gaps = 22/212 (10%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRR---QFREFEQLFWSGQSL 69
+ L G + L + +++ ++++++ + E + + + +L
Sbjct: 1 MLELVKAGGWP----MVPLLLLGVIALAIVLERMWSLRRNEVTPPGLGEEVRNWAARGNL 56
Query: 70 E-TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ T +SL+ + +G D R I++RI+ + +
Sbjct: 57 DPTHIESLRRNSPLGALLAAA---------LDVRGRPRDVIRERIEDTGR----HVVHRM 103
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
L+ LG+++SAG L+G+LG V+GM+ F I + +V GI ++L+ G+
Sbjct: 104 ERYLNALGTIASAGPLLGLLGTVVGMIQMFMGILDHGVGDVNQLAGGIGKALVCTATGMI 163
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
+++P+ +A+ F + ++ME A
Sbjct: 164 IAVPALMAHRFFKGRIAGYIVEMEQEAILLLD 195
>gi|329895889|ref|ZP_08271217.1| MotA/TolQ/ExbB proton channel family protein [gamma proteobacterium
IMCC3088]
gi|328922107|gb|EGG29466.1| MotA/TolQ/ExbB proton channel family protein [gamma proteobacterium
IMCC3088]
Length = 474
Score = 94.5 bits (234), Expect = 1e-17, Method: Composition-based stats.
Identities = 27/124 (21%), Positives = 58/124 (46%), Gaps = 1/124 (0%)
Query: 97 KSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMG 156
+ +P + ++ M + RE ++ L+ L +++ L+G+LG V GM+
Sbjct: 343 RVLKIHEDNPTMDPETLELKMAEGVMRETPKLESGLTLLKIIAAVAPLMGLLGTVTGMII 402
Query: 157 FFQSIAGYYSNN-VVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFAN 215
FQ+I + + + GI +L++ +LGL V+IP+ + + +++ + A
Sbjct: 403 TFQAITIFGAGDPKAMAGGISSALVTTVLGLLVAIPTVLLHTLVNGRAQRVIHLLNEQAT 462
Query: 216 EFSA 219
A
Sbjct: 463 GIIA 466
>gi|260768382|ref|ZP_05877316.1| MotA/TolQ/ExbB proton channel family protein [Vibrio furnissii CIP
102972]
gi|260616412|gb|EEX41597.1| MotA/TolQ/ExbB proton channel family protein [Vibrio furnissii CIP
102972]
Length = 455
Score = 94.1 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 39/202 (19%), Positives = 78/202 (38%), Gaps = 29/202 (14%)
Query: 19 QMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKN 78
G+ K I+ LL + + + + V R++ + K+
Sbjct: 262 AGGVIGKIILVLLA----VGLIIGVYRGVVLAIARQKIKAQL-------------KTPNQ 304
Query: 79 HHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSM 138
N L I E +S + ++ + A+ E + + LS L +
Sbjct: 305 PGNNPLGRILSVYNKEQNRSV-----------EALELRLLEAVVDEQTGLEKGLSMLKLL 353
Query: 139 SSAGLLVGILGAVLGMMGFFQSIAGYYSNN-VVSIPGIIESLISILLGLCVSIPSSIAYN 197
++ ++G+LG V GM+ FQ I + + + V GI +L++ +LGL ++P +A+N
Sbjct: 354 AALAPMLGLLGTVTGMIETFQVITQFGNGDPKVMAGGISMALVTTVLGLVAAMPLLLAHN 413
Query: 198 KFIEDSKKFAMQMEGFANEFSA 219
++ +E A
Sbjct: 414 ILSTQAENIRNILEKQGIGLVA 435
>gi|32472814|ref|NP_865808.1| tolQ protein [Rhodopirellula baltica SH 1]
gi|32444051|emb|CAD73493.1| probable tolQ protein [Rhodopirellula baltica SH 1]
Length = 257
Score = 94.1 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 32/152 (21%), Positives = 61/152 (40%), Gaps = 2/152 (1%)
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
E + L + N G + + S + G ++ M E ++
Sbjct: 93 EEFSQRLAANDNQGAYDLAKADESVLGQVLAAGLAKVSKGYNKALEAMQEVGEEESMKLE 152
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV--VSIPGIIESLISILLGLC 187
+LS++ + + ++G+ G V GM+ FQ IA S GI +L + L+GL
Sbjct: 153 HRLSYMALIGNLSPMIGLFGTVQGMISSFQVIALGGSTPKPSDLAAGISTALFTTLVGLA 212
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
V+IP+ AYN + +++ + +
Sbjct: 213 VAIPAIAAYNILRNRVARLLLEVGVESENLMS 244
>gi|313674732|ref|YP_004052728.1| mota/tolq/exbb proton channel [Marivirga tractuosa DSM 4126]
gi|312941430|gb|ADR20620.1| MotA/TolQ/ExbB proton channel [Marivirga tractuosa DSM 4126]
Length = 287
Score = 94.1 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 34/202 (16%), Positives = 78/202 (38%), Gaps = 18/202 (8%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITL----RRQFREFEQLFWSGQSLETVCKSLKNHHNIG 83
++++ I IL ++ I++ + + E G K + +
Sbjct: 95 MSVVLICLILGLAISIERIITLNLATTNTNKLLANVEDALNQGGV--EAAKEVTKNTRGP 152
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
+A+IF + + + +++ + + E+ + L ++ S
Sbjct: 153 VASIFTQGLMRMSEGV-----------EMVEKSVISYGSVEMGRLERGLVWISLFISLAP 201
Query: 144 LVGILGAVLGMMGFFQSIAGYYS-NNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIED 202
++G +G V+GM+G F +I + + GI +L++ + GL V++ + YN +
Sbjct: 202 MLGFMGTVIGMIGAFDAIEEAGDISPSLVAGGIKVALLTTVGGLIVAVILQLFYNYCVSK 261
Query: 203 SKKFAMQMEGFANEFSAILSRQ 224
QME + IL +
Sbjct: 262 VDSLVNQMEDASIALVDILVKH 283
>gi|254228577|ref|ZP_04922002.1| transporter, MotA/TolQ/ExbB proton channel family protein [Vibrio
sp. Ex25]
gi|262392631|ref|YP_003284485.1| MotA/TolQ/ExbB proton channel family protein [Vibrio sp. Ex25]
gi|151938959|gb|EDN57792.1| transporter, MotA/TolQ/ExbB proton channel family protein [Vibrio
sp. Ex25]
gi|262336225|gb|ACY50020.1| MotA/TolQ/ExbB proton channel family protein [Vibrio sp. Ex25]
Length = 453
Score = 94.1 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 31/117 (26%), Positives = 57/117 (48%), Gaps = 1/117 (0%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-V 169
+ ++ +D I R I +S + +S L+G+LG V+GM+G FQ+I + + +
Sbjct: 333 EDLEAKLDEIILRNAPSIERFISSIKLFASVAPLLGLLGTVMGMIGTFQAITLFGTGDPK 392
Query: 170 VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+ GI E+L++ +LGL V+IP Y ++ +E + F A +
Sbjct: 393 LMAGGISEALVTTMLGLVVAIPLLFLYTIVHSKGRRLVQTLEEQSAGFIARYQEKLH 449
>gi|304436935|ref|ZP_07396899.1| MotA/TolQ/ExbB proton channel [Selenomonas sp. oral taxon 149 str.
67H29BP]
gi|304370134|gb|EFM23795.1| MotA/TolQ/ExbB proton channel [Selenomonas sp. oral taxon 149 str.
67H29BP]
Length = 206
Score = 94.1 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 42/205 (20%), Positives = 77/205 (37%), Gaps = 23/205 (11%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG---QS 68
S LF G ++ L I S+++ ++ +++ + R+ R F + +
Sbjct: 6 SAVHLFHSGGF----VMYPLLILSLITLAIAVERFYYYRINRKGSRVFFHGVYHAAMQKD 61
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCD-KGARSPIGIQDRIDRMMDVAIARELEE 127
+TV K K +A I S M KG+ S + I+
Sbjct: 62 FDTVGKLCKEFP-SAIARIIESGMDNASSETSMKGSFSDRMSMEAINFR----------- 109
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLC 187
L +L ++ + L+G+LG V GM+ F + ++ + E+L++ GLC
Sbjct: 110 --RYLDYLSAIVTIAPLLGLLGTVTGMIQTFSVLDAGGGAAAITGG-VGEALVATASGLC 166
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEG 212
V+I + Y F E
Sbjct: 167 VAIIAFCVYTYFSHQLDTIVTDTER 191
>gi|312143690|ref|YP_003995136.1| MotA/TolQ/ExbB proton channel [Halanaerobium sp. 'sapolanicus']
gi|311904341|gb|ADQ14782.1| MotA/TolQ/ExbB proton channel [Halanaerobium sp. 'sapolanicus']
Length = 205
Score = 94.1 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 31/112 (27%), Positives = 53/112 (47%), Gaps = 1/112 (0%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
+++ MD +L E+ L L ++ A +G+LG V GM+ FQ + S
Sbjct: 86 KEQFQLFMDAEEVDKLPELERGLGLLNFLAQASPTLGLLGTVSGMINTFQVLGIGGSPEQ 145
Query: 170 VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+++ GI E+L + GL +S+P+ Y+ F K QM+ E +L
Sbjct: 146 MAV-GISEALFTTAAGLVISLPALAFYHYFYSKIDKLVNQMDNLRLETKNLL 196
>gi|291514824|emb|CBK64034.1| Biopolymer transport proteins [Alistipes shahii WAL 8301]
Length = 250
Score = 94.1 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 30/200 (15%), Positives = 80/200 (40%), Gaps = 18/200 (9%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFI----TLRRQFREFEQLFWSGQSLETVCKSLKNHHNIG 83
+ + + ++ +V I++ + ++ E+ +G K + +
Sbjct: 59 MLPVLLCLVIGLAVAIERILYLSLSTINSKKLIASVEEALKNGGI--EAAKEVCRNTRGP 116
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
+A+I+ + + + D +++ + + + ++ LS++G +
Sbjct: 117 IASIYYQGLDRYDQGL-----------DAVEKAVVSYGSVQTGQMESGLSWIGLFIALSP 165
Query: 144 LVGILGAVLGMMGFFQSIAGYYS-NNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIED 202
++G +G V+GM+ F +I + + GI +L++ L+GL ++ + YN +
Sbjct: 166 MLGFMGTVVGMIAAFDAIQAAGDISPTLVAGGIKVALLTTLMGLIAAVVLQLFYNYIVSK 225
Query: 203 SKKFAMQMEGFANEFSAILS 222
ME + IL+
Sbjct: 226 IDSLVNDMEDSSITLMDILT 245
>gi|153002735|ref|YP_001368416.1| MotA/TolQ/ExbB proton channel [Shewanella baltica OS185]
gi|304412055|ref|ZP_07393665.1| MotA/TolQ/ExbB proton channel [Shewanella baltica OS183]
gi|307305950|ref|ZP_07585696.1| MotA/TolQ/ExbB proton channel [Shewanella baltica BA175]
gi|151367353|gb|ABS10353.1| MotA/TolQ/ExbB proton channel [Shewanella baltica OS185]
gi|304349605|gb|EFM14013.1| MotA/TolQ/ExbB proton channel [Shewanella baltica OS183]
gi|306911443|gb|EFN41869.1| MotA/TolQ/ExbB proton channel [Shewanella baltica BA175]
Length = 308
Score = 94.1 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 39/200 (19%), Positives = 87/200 (43%), Gaps = 17/200 (8%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITL----RRQFREFEQLFWSGQSLETVCKSLKNHHN 81
++ +L + S+++ ++++ K + F + R+ R+ L+ G+ E + + + +
Sbjct: 88 TVVVILLLMSLVAMTIVLMKLIQFQRVGLWQRKPARQALALWQQGKQEEALQLAAVSRNP 147
Query: 82 IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSA 141
AM++ + + P+ ++ ++ L ++ L L + S
Sbjct: 148 TA------QAMAQAIRGITRQLPEPLVREE----VLRYGCNA-LFQLRRGLRPLEVIGSL 196
Query: 142 GLLVGILGAVLGMMGFFQSIAGYYS--NNVVSIPGIIESLISILLGLCVSIPSSIAYNKF 199
L+G+LG V+GM+ FQ + + N + GI E+L++ +GLCV+IP N
Sbjct: 197 SPLLGLLGTVMGMIAAFQQLQAAGNKVNPAILSGGIWEALLTTAVGLCVAIPVVALLNYL 256
Query: 200 IEDSKKFAMQMEGFANEFSA 219
A +M+ +
Sbjct: 257 ERRVDHLAHEMDNLVTQLFT 276
>gi|325928367|ref|ZP_08189562.1| biopolymer transport protein [Xanthomonas perforans 91-118]
gi|325541243|gb|EGD12790.1| biopolymer transport protein [Xanthomonas perforans 91-118]
Length = 209
Score = 94.1 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 38/199 (19%), Positives = 89/199 (44%), Gaps = 18/199 (9%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRR---QFREFEQLFWSGQSLE-TVCKSLKNHHNIG 83
+ L + +++ ++++++ + E + + + +L+ T +SL+ + +G
Sbjct: 1 MVPLLLLGVIALAIVLERLWSLRRNEVTPPGLGEEVRNWAARGNLDPTHIESLRRNSPLG 60
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
+ D R I++RI+ + + L+ LG+++SAG
Sbjct: 61 ALL---------AAALDVRGRPRDMIRERIEDTGR----HVVHRMERYLNALGTIASAGP 107
Query: 144 LVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIED 202
L+G+LG V+GM+ F I + +V GI ++L+ G+ +++P+ +A+ F
Sbjct: 108 LLGLLGTVVGMIQMFLGILDHGVGDVNQLAGGIGKALVCTATGMIIAVPALMAHRFFKGR 167
Query: 203 SKKFAMQMEGFANEFSAIL 221
+ ++ME A +
Sbjct: 168 IAGYIIEMEQEATLLLDTI 186
>gi|82703417|ref|YP_412983.1| MotA/TolQ/ExbB proton channel [Nitrosospira multiformis ATCC 25196]
gi|82411482|gb|ABB75591.1| outer membrane transport energization protein ExbB [Nitrosospira
multiformis ATCC 25196]
Length = 215
Score = 94.1 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 35/208 (16%), Positives = 82/208 (39%), Gaps = 18/208 (8%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFW----SGQSLETVCKSLKNHHN 81
+ L + ++++ +++++K+ + R + L + LE + L + H
Sbjct: 16 FTVLPLSLLAVIALAIMLEKAFIYWKFARLSHDLLNLVETYGFAWADLEKILSGLDDRHY 75
Query: 82 IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSA 141
+K+ + + + + +L L ++ +A
Sbjct: 76 -------------YKRFFEVVISNRHHPSWWTESRAADEAQLIETSLGRRLWVLETIVTA 122
Query: 142 GLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCVSIPSSIAYNKFI 200
L+G++G V+GMM FQ I G N ++ G+ E+LI+ ++GL +++ + +N F
Sbjct: 123 APLLGLVGTVIGMMRAFQVIGGEGVVNPTAVTGGVAEALIATVVGLLIALIALFGFNYFS 182
Query: 201 EDSKKFAMQMEGFANEFSAILSRQTEGN 228
+ +ME + E +
Sbjct: 183 RLQSQTMDEMERLGTRLIDHIRLDQEES 210
>gi|303256701|ref|ZP_07342715.1| MotA/TolQ/ExbB proton channel family protein [Burkholderiales
bacterium 1_1_47]
gi|302860192|gb|EFL83269.1| MotA/TolQ/ExbB proton channel family protein [Burkholderiales
bacterium 1_1_47]
Length = 223
Score = 94.1 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 40/219 (18%), Positives = 89/219 (40%), Gaps = 20/219 (9%)
Query: 14 FALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVC 73
+L + G ++ L + SI+ ++II +S+++I + +
Sbjct: 23 MSLIIAGGW----VMVPLLLISIIVLALIIDRSLSYI---------WNPLPDADQQKNIL 69
Query: 74 KSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLS 133
+ ++ F + G+ + + + + I+ + ++L
Sbjct: 70 EKIQKGEFAAAETYFSETPWLKNYASALGSSEKMPFYEGV---LAENISSLAAMMDKRLP 126
Query: 134 FLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSN--NVVSIPGIIESLISILLGLCVSIP 191
L ++ L+G+LG ++GM+ F IA S + GI ++LI+ GL ++IP
Sbjct: 127 LLATLGRISPLLGLLGTIIGMIQTFAVIAQSRSGIDMELLAEGIWQALITTATGLIIAIP 186
Query: 192 SSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
+ Y F+ + AN+ A+L +Q++ N +
Sbjct: 187 AVFCYRIFLSIESNRLDYLNRVANK--AVLYKQSQNNAA 223
>gi|253687209|ref|YP_003016399.1| MotA/TolQ/ExbB proton channel [Pectobacterium carotovorum subsp.
carotovorum PC1]
gi|251753787|gb|ACT11863.1| MotA/TolQ/ExbB proton channel [Pectobacterium carotovorum subsp.
carotovorum PC1]
Length = 227
Score = 94.1 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 27/191 (14%), Positives = 85/191 (44%), Gaps = 12/191 (6%)
Query: 18 MQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG-QSLETVCKSL 76
M + + I +++ +++ +II++S+ F RRQ + ++ + + + + +L
Sbjct: 1 MNADMLHEIIFYVMYAALVIALMIIIERSLYFSYTRRQAKRLDRALTADIRHVHDLPDAL 60
Query: 77 KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLG 136
++ + + + + +D ++ ++D + +++ L L
Sbjct: 61 TQRPSLPITVVTPVLAQSHQ----------VENRDALNDLIDAQYLQSKPQLSRGLWILE 110
Query: 137 SMSSAGLLVGILGAVLGMMGFFQSIAGYY-SNNVVSIPGIIESLISILLGLCVSIPSSIA 195
++ +A L+G+LG ++G++ F++++ S+ G+ +L + LG+ +++ +
Sbjct: 111 TVVTAAPLLGLLGTIMGIIETFKALSAAGISDPSQVSAGMGTALYATGLGIAIALVCLLG 170
Query: 196 YNKFIEDSKKF 206
N +
Sbjct: 171 NNFLQSRMEHI 181
>gi|330505169|ref|YP_004382038.1| MotA/TolQ/ExbB proton channel [Pseudomonas mendocina NK-01]
gi|328919455|gb|AEB60286.1| MotA/TolQ/ExbB proton channel [Pseudomonas mendocina NK-01]
Length = 449
Score = 94.1 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 40/204 (19%), Positives = 81/204 (39%), Gaps = 26/204 (12%)
Query: 18 MQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLK 77
+Q G V +I +L F +L + + + V + + V
Sbjct: 262 LQQGGLVGWVIVVLGAFGLL---LAVWRMVYLARVGSGVK------------AQVHDLSA 306
Query: 78 NHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGS 137
++ L + GA+ + + ++ +D AI +E + + L
Sbjct: 307 PRNDNPLGRVIGV----------LGAKPQLADLETLELKLDEAILQETPPLEKGQGLLKL 356
Query: 138 MSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAY 196
+++ L+G+LG V GM+ FQ+I + + GI ++L++ +LGL V+IP +
Sbjct: 357 LAAVAPLLGLLGTVTGMIVTFQAITQSGGGDSRLMADGISQALVTTVLGLVVAIPLLFLH 416
Query: 197 NKFIEDSKKFAMQMEGFANEFSAI 220
+ SK +E + A+
Sbjct: 417 SLLASRSKGLIQILEQQSAGLIAL 440
>gi|121534693|ref|ZP_01666514.1| MotA/TolQ/ExbB proton channel [Thermosinus carboxydivorans Nor1]
gi|121306713|gb|EAX47634.1| MotA/TolQ/ExbB proton channel [Thermosinus carboxydivorans Nor1]
Length = 205
Score = 94.1 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 48/214 (22%), Positives = 90/214 (42%), Gaps = 20/214 (9%)
Query: 15 ALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQ---FREFEQLFWSGQSLET 71
ALF + GL ++ L SI+ +++I++ + T E+ GQ +
Sbjct: 9 ALFQKGGL----VMYPLLACSIMVIAIVIERWQYYRTAETSGEFLALLEKKLAEGQ-WQE 63
Query: 72 VCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEK 131
+ I I K KGA P +Q+ ++ A A + + E+
Sbjct: 64 AMALCEKTSGITPRIIL--------KVLQKGALDPALLQN----ALEGAAALAVARLRER 111
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIP 191
L +L ++ + L+G+LG V+GM+ F +A G+ E+L++ GLCV++
Sbjct: 112 LGYLETIVTLAPLLGLLGTVIGMINSFSIMAIRSGQPHAITGGVGEALVATAAGLCVAVM 171
Query: 192 SSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+ +A++ F + + ME R+T
Sbjct: 172 ALVAHSYFAQRLDRIITGMEMAFTCLLDAAGRRT 205
>gi|254293842|ref|YP_003059865.1| MotA/TolQ/ExbB proton channel [Hirschia baltica ATCC 49814]
gi|254042373|gb|ACT59168.1| MotA/TolQ/ExbB proton channel [Hirschia baltica ATCC 49814]
Length = 222
Score = 93.7 bits (232), Expect = 2e-17, Method: Composition-based stats.
Identities = 39/183 (21%), Positives = 79/183 (43%), Gaps = 17/183 (9%)
Query: 27 IITLLFIFSILSWSVIIQKSVNFIT--LRRQFREFEQLFWSGQSLETVCKSLKNHHNIGL 84
++ +L + S+L++++I+ K F T + R + LF L+ KS L
Sbjct: 21 VLVILALTSVLTFTLILYKLWQFYTNEIGRHKLLKQALFQWDNGLKDPAKSALEPSKHCL 80
Query: 85 AAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLL 144
+ MS + ++ I++ ++ + + L ++ L
Sbjct: 81 MPMIQLGMS-------------LHGRENINKRLESEAEQAFQPFERGFRTLDMVAQLAPL 127
Query: 145 VGILGAVLGMMGFFQSIAGYYS--NNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIED 202
+G+ G VLGM+ F+++ G S + + GI +L++ GL V++P+SIA + F
Sbjct: 128 LGLFGTVLGMIEAFRALQGAGSQVDPAILAGGIWVALMTTAAGLAVAMPTSIALSWFEAQ 187
Query: 203 SKK 205
Sbjct: 188 MDN 190
>gi|42522034|ref|NP_967414.1| putative adventurous gliding motility protein R [Bdellovibrio
bacteriovorus HD100]
gi|39574565|emb|CAE78407.1| putative adventurous gliding motility protein R [Bdellovibrio
bacteriovorus HD100]
Length = 248
Score = 93.7 bits (232), Expect = 2e-17, Method: Composition-based stats.
Identities = 37/191 (19%), Positives = 79/191 (41%), Gaps = 16/191 (8%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRR-----QFREFEQLFWSGQSLETVCKSLKNHHNI 82
+ + ++S ++I ++S+ R+ + + SG + + +SL+
Sbjct: 41 MWAILAAQVVSVAIIAERSIALFVNRKVNQKDLSKTIAEDIKSGNLDKALRRSLQMSAKE 100
Query: 83 GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAG 142
L + + + A +G ++ I MD + E I +++ FL ++
Sbjct: 101 PLGVVASAGIQ---------AAIDMGGKEEIQLKMDEVLLEENSRIEKRIGFLAMFANVA 151
Query: 143 LLVGILGAVLGMMGFFQSIAGYYSNNVVSI--PGIIESLISILLGLCVSIPSSIAYNKFI 200
LVG+LG + G++ F IA +I GI ++ + GL V++P+ I Y
Sbjct: 152 TLVGLLGTITGLIHSFAGIANANPVEKAAILSNGISLAMNTTAYGLIVAVPALIMYAVLQ 211
Query: 201 EDSKKFAMQME 211
+ K + +
Sbjct: 212 NRATKLSEDLN 222
>gi|109897386|ref|YP_660641.1| MotA/TolQ/ExbB proton channel [Pseudoalteromonas atlantica T6c]
gi|109699667|gb|ABG39587.1| outer membrane transport energization protein ExbB
[Pseudoalteromonas atlantica T6c]
Length = 469
Score = 93.7 bits (232), Expect = 2e-17, Method: Composition-based stats.
Identities = 31/126 (24%), Positives = 63/126 (50%), Gaps = 1/126 (0%)
Query: 106 PIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYY 165
P + ++ + AI E+ +++ L+ + +S L+G+LG V GM+ FQ+I +
Sbjct: 341 PQADTESLELHLTEAILGEIPKLSRNLTIIKIISVVAPLMGLLGTVTGMINTFQAITLFG 400
Query: 166 SNN-VVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+ + + GI +L++ +LGL V+IP ++ Y SK ++ A+ A + +
Sbjct: 401 TGDPKLMAGGISTALVTTVLGLVVAIPMTLLYAMLNTRSKDVVFILQEQASGVIAERAER 460
Query: 225 TEGNIS 230
E +
Sbjct: 461 METKSA 466
>gi|239996818|ref|ZP_04717342.1| putative Tol protein [Alteromonas macleodii ATCC 27126]
Length = 454
Score = 93.7 bits (232), Expect = 2e-17, Method: Composition-based stats.
Identities = 30/124 (24%), Positives = 59/124 (47%), Gaps = 1/124 (0%)
Query: 97 KSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMG 156
+ P + ++ + AI E+ ++ L+ + +S L+G+LG V GM+
Sbjct: 325 RVLKVRDEHPDADVEALELHLTEAILGEVPKLGRNLTIIKIISVVAPLMGLLGTVTGMIN 384
Query: 157 FFQSIAGYYSNN-VVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFAN 215
FQ+I + + + + GI +L++ +LGL V+IP ++ Y SK ++ A+
Sbjct: 385 TFQAITLFGTGDPKLMAGGISTALVTTVLGLVVAIPMTLLYAMLNTRSKNIVYILQEQAS 444
Query: 216 EFSA 219
A
Sbjct: 445 GVIA 448
>gi|313896591|ref|ZP_07830140.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Selenomonas sp. oral taxon 137 str. F0430]
gi|312974776|gb|EFR40242.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Selenomonas sp. oral taxon 137 str. F0430]
Length = 206
Score = 93.7 bits (232), Expect = 2e-17, Method: Composition-based stats.
Identities = 40/207 (19%), Positives = 81/207 (39%), Gaps = 21/207 (10%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG---QS 68
S LF GL ++ L + S++++++ +++ + R+ R F + +
Sbjct: 6 SAMHLFKSGGL----VMYPLLLLSLITFAIAVERFYYYRINRKGSRVFFHGVYHAAVQKD 61
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+T+ K K + I M+ ++ KGA S + I+
Sbjct: 62 FDTIEKLCKEFPSAISRVIESGLMNAGTETAMKGAFSDRMSMEAINFR------------ 109
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCV 188
L +L ++ + L+G+LG V GM+ F + ++ + E+L++ GLCV
Sbjct: 110 -RYLDYLSAIVTIAPLLGLLGTVTGMIQTFSVLDEGGGAGAITGG-VGEALVATASGLCV 167
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFAN 215
+I + Y F E +
Sbjct: 168 AIIAFCVYTYFSHQLDTIVTDTERLCS 194
>gi|319953559|ref|YP_004164826.1| mota/tolq/exbb proton channel [Cellulophaga algicola DSM 14237]
gi|319422219|gb|ADV49328.1| MotA/TolQ/ExbB proton channel [Cellulophaga algicola DSM 14237]
Length = 263
Score = 93.7 bits (232), Expect = 2e-17, Method: Composition-based stats.
Identities = 36/199 (18%), Positives = 80/199 (40%), Gaps = 18/199 (9%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLR----RQFREFEQLFWSGQSLETVCKSLKNHHNIG 83
+ ++ + IL +V I++ + + + E SG K + +
Sbjct: 73 MGIVLLCLILGLAVAIERIIYLNLATTNTTKLKQRVEDALASGGI--EAAKEVCRNTKGP 130
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
+A+I+ + +S + ++ + ++ ++ + +S+L +
Sbjct: 131 VASIYYQGLDRAGES-----------IESAEKAVVAYGGVQMGQLEKNVSWLSLFIAIAP 179
Query: 144 LVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIPSSIAYNKFIED 202
++G +G V+GM+ F+ IA + + I G I +L++ + GL V+I I YN I
Sbjct: 180 MLGFMGTVIGMIAAFEKIAAVGNLSASLIAGDIQVALLTTVFGLIVAIILQIFYNYIIAK 239
Query: 203 SKKFAMQMEGFANEFSAIL 221
ME + +L
Sbjct: 240 IDSIVNDMEDSSISLIDML 258
>gi|195953341|ref|YP_002121631.1| MotA/TolQ/ExbB proton channel [Hydrogenobaculum sp. Y04AAS1]
gi|195932953|gb|ACG57653.1| MotA/TolQ/ExbB proton channel [Hydrogenobaculum sp. Y04AAS1]
Length = 206
Score = 93.7 bits (232), Expect = 2e-17, Method: Composition-based stats.
Identities = 38/202 (18%), Positives = 92/202 (45%), Gaps = 13/202 (6%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ--LFWSGQSLETVCKSLKNHHNIG 83
+I L + SI+SW++I++++ + R + + Q G++++ K L+ +
Sbjct: 13 IVIYPLLVLSIISWAIILERAFSLRLSRFLPKGYTQIKALILGRNIDAAVKMLETQNTNA 72
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
+ F+S + + K + ++R+ + + + + + + L FL +++S
Sbjct: 73 -SKAFLSLLKAYLKGRRDSYQ--------LNRIAEDSFSYVISDADKNLVFLSTVASVSP 123
Query: 144 LVGILGAVLGMMGFFQSIAGYYSNNVV--SIPGIIESLISILLGLCVSIPSSIAYNKFIE 201
L+G+ G + G++ F + + + + + GI E+L + GL V+IP+ Y +
Sbjct: 124 LLGLFGTITGLIKVFAAFSTSETQSAMYLLANGISEALTAAATGLAVAIPALFFYWVYKA 183
Query: 202 DSKKFAMQMEGFANEFSAILSR 223
+ ++E E +S
Sbjct: 184 VENRIVSKVETEVKEVIDAISE 205
>gi|327537500|gb|EGF24222.1| TolQ-type transport protein [Rhodopirellula baltica WH47]
Length = 276
Score = 93.7 bits (232), Expect = 2e-17, Method: Composition-based stats.
Identities = 41/223 (18%), Positives = 89/223 (39%), Gaps = 19/223 (8%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLR----RQFREFEQLFWSGQ 67
SI+++ G+ I+ +L FSI + +++ +S+ + E S +
Sbjct: 31 SIWSIVTSGGIPGLMILFVLLSFSIAAVYLVVDQSLALRRQDVVPDKLSEEVAAALQSSR 90
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
E ++L LA I ++ + P +++ ++ A+ +
Sbjct: 91 VAE--AETLLRQKPSVLAGIIAVGLN------HREYGWPE-----VEKSVEDALVDQSSR 137
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV--SIPGIIESLISILLG 185
+ ++ +L +++ +VG+LG V GM+ F+ +A GI ++L++ + G
Sbjct: 138 MLRRIDYLAMIANLAPMVGLLGTVTGMIFAFRQVAATRGAAGAGDLAEGIYQALVTTVGG 197
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
L V+IP+ A + A+ A L R+
Sbjct: 198 LLVAIPALAASGVLRNRVDALLSDVTMHADRALAPLRRRAAAT 240
>gi|269959386|ref|ZP_06173769.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|269835823|gb|EEZ89899.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
Length = 453
Score = 93.7 bits (232), Expect = 2e-17, Method: Composition-based stats.
Identities = 31/117 (26%), Positives = 57/117 (48%), Gaps = 1/117 (0%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-V 169
+ ++ +D I R I +S + +S L+G+LG V+GM+G FQ+I + + +
Sbjct: 333 EDLEAKLDEIILRNAPSIERFISSIKLFASVAPLLGLLGTVMGMIGTFQAITLFGTGDPK 392
Query: 170 VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+ GI E+L++ +LGL V+IP Y ++ +E + F A +
Sbjct: 393 LMAGGISEALVTTMLGLVVAIPLLFLYTIVHSKGRRLVQTLEEQSAGFIARYQEKLH 449
>gi|268317274|ref|YP_003290993.1| MotA/TolQ/ExbB proton channel [Rhodothermus marinus DSM 4252]
gi|262334808|gb|ACY48605.1| MotA/TolQ/ExbB proton channel [Rhodothermus marinus DSM 4252]
Length = 241
Score = 93.7 bits (232), Expect = 2e-17, Method: Composition-based stats.
Identities = 35/199 (17%), Positives = 76/199 (38%), Gaps = 18/199 (9%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLET----VCKSLKNHHNIG 83
+ + I I+ ++ ++ + R+F LE + +
Sbjct: 35 MWPVLISLIIGLAIAFERIITLNLADINTRKFILQVKKA--LEEGGIQAAEEICAKTRGP 92
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
+A++F + + R+ GI + +++ + + E+ + L +L S
Sbjct: 93 VASVFQAGL----------LRADEGI-EAVEKAIVSYGSIEMSFLERGLVWLSLFISLAP 141
Query: 144 LVGILGAVLGMMGFFQSIAGYYS-NNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIED 202
+ G LG V+GM+ F +I + + GI +L++ + GL +I YN +
Sbjct: 142 MFGFLGTVVGMVQAFDAIEQAGDISPSLVAGGIKVALLTTVFGLITAIILQFFYNYAVSK 201
Query: 203 SKKFAMQMEGFANEFSAIL 221
+ + ME + E L
Sbjct: 202 IDRIVVDMEEASIELIDSL 220
>gi|149369625|ref|ZP_01889477.1| MotA/TolQ/ExbB proton channel family protein [unidentified
eubacterium SCB49]
gi|149357052|gb|EDM45607.1| MotA/TolQ/ExbB proton channel family protein [unidentified
eubacterium SCB49]
Length = 267
Score = 93.7 bits (232), Expect = 2e-17, Method: Composition-based stats.
Identities = 36/199 (18%), Positives = 81/199 (40%), Gaps = 18/199 (9%)
Query: 28 ITLLFIFSILSWSVIIQKSVNF----ITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIG 83
+ ++ + IL ++ I++ + ++ + E SG K + +
Sbjct: 75 MGIVLLCLILGLAIAIERIIYLNLSTTNTQKLAQNVEDALSSGGV--EAAKEVCRNTKGP 132
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
+A+I+ + R+ GI + ++ + ++ ++ + +S++ +
Sbjct: 133 VASIYYQGLD----------RADEGI-EAAEKAVVAYGGVQMGQLEKNVSWVSLFIALAP 181
Query: 144 LVGILGAVLGMMGFFQSIAGYYS-NNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIED 202
++G +G V+GM+ F IA N + GI +L++ + GL V+I I YN I
Sbjct: 182 MLGFMGTVIGMIQAFDKIAAAGDMNPSLVAGGIKVALLTTVFGLIVAIILQIFYNYIIAK 241
Query: 203 SKKFAMQMEGFANEFSAIL 221
ME + +L
Sbjct: 242 IDSIVNSMEDASITLIDML 260
>gi|331006723|ref|ZP_08329998.1| MotA/TolQ/ExbB proton channel family protein [gamma proteobacterium
IMCC1989]
gi|330419476|gb|EGG93867.1| MotA/TolQ/ExbB proton channel family protein [gamma proteobacterium
IMCC1989]
Length = 205
Score = 93.7 bits (232), Expect = 2e-17, Method: Composition-based stats.
Identities = 38/202 (18%), Positives = 81/202 (40%), Gaps = 10/202 (4%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAI 87
+ + + SI ++ +++ + + WS ++N+
Sbjct: 12 MWPIILCSIAVIAISVERFWTLNASKIAPKNQLAQVWS---------WVQNNQIDAAKLR 62
Query: 88 FMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGI 147
+ SE + G + ++ + + A ++ + + + LG++++ L+G+
Sbjct: 63 ELRQSSELGRILAAGLSNAQAGREVMKDSIQEAASQVIHAMERYVGALGTIAAVSPLLGL 122
Query: 148 LGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKF 206
LG VLGM+ F +I + N GI E+LI+ GLCV+IP+ I + F+
Sbjct: 123 LGTVLGMIKVFVAIELQGTGNAGALAGGISEALITTAAGLCVAIPAMIMHRFFVRKIDSL 182
Query: 207 AMQMEGFANEFSAILSRQTEGN 228
+ ME + + L
Sbjct: 183 VVVMEQESVKLVDALHADKPAK 204
>gi|332533405|ref|ZP_08409270.1| MotA/TolQ/ExbB proton channel family protein [Pseudoalteromonas
haloplanktis ANT/505]
gi|332037114|gb|EGI73571.1| MotA/TolQ/ExbB proton channel family protein [Pseudoalteromonas
haloplanktis ANT/505]
Length = 455
Score = 93.7 bits (232), Expect = 2e-17, Method: Composition-based stats.
Identities = 31/115 (26%), Positives = 60/115 (52%), Gaps = 1/115 (0%)
Query: 106 PIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYY 165
P D ++ + AI RE+ ++T L+ + +S L+G+LG V GM+ FQ+I +
Sbjct: 334 PSVSHDTLELKLSEAILREMPKVTRNLTLIKIISVVAPLLGLLGTVTGMINTFQAITLFG 393
Query: 166 SNN-VVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
+ + + GI ++L++ +LGL V+IP+ Y +K + ++ + A
Sbjct: 394 TGDPKLMAGGISQALVTTVLGLVVAIPTVFLYTLLNTRAKNILLTIQEQSAGIIA 448
>gi|301382842|ref|ZP_07231260.1| MotA/TolQ/ExbB proton channel family protein [Pseudomonas syringae
pv. tomato Max13]
gi|302131671|ref|ZP_07257661.1| MotA/TolQ/ExbB proton channel family protein [Pseudomonas syringae
pv. tomato NCPPB 1108]
gi|330878266|gb|EGH12415.1| MotA/TolQ/ExbB proton channel family protein [Pseudomonas syringae
pv. morsprunorum str. M302280PT]
gi|330966263|gb|EGH66523.1| MotA/TolQ/ExbB proton channel family protein [Pseudomonas syringae
pv. actinidiae str. M302091]
gi|331019171|gb|EGH99227.1| MotA/TolQ/ExbB proton channel family protein [Pseudomonas syringae
pv. lachrymans str. M302278PT]
Length = 225
Score = 93.7 bits (232), Expect = 2e-17, Method: Composition-based stats.
Identities = 46/218 (21%), Positives = 86/218 (39%), Gaps = 19/218 (8%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
++ L G + + + SI + +II++ R W + +
Sbjct: 1 MWELVKSGGWM----MLPIILSSIAAAGIIIERLWTLRASRIAPPHLLGQAWQWIQEKKL 56
Query: 73 -CKSLKN-HHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
+ LK + L I + ++ K + + ++ A AR + ++
Sbjct: 57 DNEKLKQLRADSPLGEILAAGLANSKHGR-----------EIMKECIEEAAARVIHDLER 105
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGLCV 188
LS LGS+++ L+G+LG VLGM+ F S G +N V GI ++LI GL V
Sbjct: 106 YLSALGSIAAMAPLLGLLGTVLGMIEIFGSFNSTGATANAGVLASGISKALICTASGLIV 165
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ + + + ME A ++ +
Sbjct: 166 AIPAIFFHRFLQSRVDELVVGMEQQAIRLVEVVQGDRD 203
>gi|309389205|gb|ADO77085.1| MotA/TolQ/ExbB proton channel [Halanaerobium praevalens DSM 2228]
Length = 215
Score = 93.7 bits (232), Expect = 2e-17, Method: Composition-based stats.
Identities = 42/196 (21%), Positives = 84/196 (42%), Gaps = 11/196 (5%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLA 85
+ L + + + +II++S+ FI L + E+ + + ++ + LA
Sbjct: 11 VVAYPLLLAAFVMIFIIIERSIVFI-LNYRSINKEKYLKAVLNFDS-----EKPKKSILA 64
Query: 86 AIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLV 145
A + + ++ ++ +D +L E+ + L FL ++ A +
Sbjct: 65 NKKGIAAEIYYNLLKRKPKN----REEFSLYLDAEEVDKLPELEKHLGFLNFIAQAAPTL 120
Query: 146 GILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKK 205
G+LG V GM+ FQ + G N GI E+L + GL +S+P++ Y+ F +K
Sbjct: 121 GLLGTVSGMITTFQVL-GVGGNPEQMALGISEALFTTAAGLIISLPAAAFYHYFYSRLEK 179
Query: 206 FAMQMEGFANEFSAIL 221
Q+ E ++L
Sbjct: 180 LHNQLNNLRLESESLL 195
>gi|304436788|ref|ZP_07396756.1| MotA/TolQ/ExbB proton channel family protein [Selenomonas sp. oral
taxon 149 str. 67H29BP]
gi|304370268|gb|EFM23925.1| MotA/TolQ/ExbB proton channel family protein [Selenomonas sp. oral
taxon 149 str. 67H29BP]
Length = 230
Score = 93.7 bits (232), Expect = 2e-17, Method: Composition-based stats.
Identities = 41/198 (20%), Positives = 78/198 (39%), Gaps = 20/198 (10%)
Query: 17 FMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITL---RRQFREFEQLFWSGQSLETVC 73
F Q G+ ++ L I SI + I+++ F R F + + E +
Sbjct: 20 FKQGGI----VMYFLAIASIFVVFIGIERAFYFARADAGRAFAHAFMLHIANARYAEALA 75
Query: 74 KSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLS 133
L +A I SA++ DR+ M++ L ++ ++
Sbjct: 76 --LARDQRGAIADILFSAIT-----------KNSSRADRMSAYMEIQSGIALSKMRRRIY 122
Query: 134 FLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSS 193
+L + + L+G+LG + GM+ F GI E+LI+ +GLCV++ +
Sbjct: 123 YLSVIVTMAPLLGLLGTISGMITTFSVFNIQAGEPAAITGGIGEALIATAMGLCVALVAL 182
Query: 194 IAYNKFIEDSKKFAMQME 211
+ + F + + ME
Sbjct: 183 MVHAYFSQRIENIVTDME 200
>gi|330831693|ref|YP_004394645.1| TonB system biopolymer transport component [Aeromonas veronii B565]
gi|328806829|gb|AEB52028.1| TonB system biopolymer transport component [Aeromonas veronii B565]
Length = 434
Score = 93.7 bits (232), Expect = 2e-17, Method: Composition-based stats.
Identities = 41/208 (19%), Positives = 85/208 (40%), Gaps = 36/208 (17%)
Query: 22 LAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHN 81
+ V L I ++ WS+ S +RRQ + E H +
Sbjct: 254 IIVLLAAIGLGIAAVRLWSL----SRELGRVRRQLKSGE-----------------YHAD 292
Query: 82 IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSA 141
L + A + P + ++ +D AI +E + + + +++
Sbjct: 293 NALGRVLTVA-----------DKHPELSMETLELRLDEAILQETPRMERGIGMVKVIAAI 341
Query: 142 GLLVGILGAVLGMMGFFQSIAGYYSNN-VVSIPGIIESLISILLGLCVSIPSSIAYNKFI 200
++G+LG V GM+G FQ+I + + + + GI +L++ + GL +IP +A++
Sbjct: 342 APMLGLLGTVTGMIGTFQAITQFGTGDPKIMAGGISMALVTTVQGLVAAIPLILAHSLLQ 401
Query: 201 EDSKKFAMQMEGFANEFSAILSRQTEGN 228
+ + +E + + IL+ + E N
Sbjct: 402 SRFTELSNVLEQ---QVAGILAERAESN 426
>gi|303230272|ref|ZP_07317039.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Veillonella atypica ACS-134-V-Col7a]
gi|302515055|gb|EFL57030.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Veillonella atypica ACS-134-V-Col7a]
Length = 205
Score = 93.7 bits (232), Expect = 2e-17, Method: Composition-based stats.
Identities = 36/203 (17%), Positives = 77/203 (37%), Gaps = 21/203 (10%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQF---REFEQLFWSGQSL 69
+ LF G ++ L S++ ++ +++S + + + Q
Sbjct: 7 VIHLFHSGGY----VMYPLLFLSLMVIAIAVERSFYYRKYAGKTYMVTHAVNEYAKLQKW 62
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+ + +K + +I + I + + ++ + + +
Sbjct: 63 DEIENVIKENPSIA-SRIAEAGLK------------NGATEEGMKTAFSDQMGVDAVGFR 109
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVS 189
+ + +L + + L+G+LG V GM+G F SI + G+ E+LI+ GLCV+
Sbjct: 110 KYMDYLSATVTISPLLGLLGTVTGMIGSF-SILDAGAGASAITGGVGEALIATASGLCVA 168
Query: 190 IPSSIAYNKFIEDSKKFAMQMEG 212
I + I Y F Q+E
Sbjct: 169 IMAFIVYTFFSHRLDSIINQIEN 191
>gi|327539930|gb|EGF26531.1| TolQ-type transport protein [Rhodopirellula baltica WH47]
Length = 281
Score = 93.7 bits (232), Expect = 2e-17, Method: Composition-based stats.
Identities = 32/152 (21%), Positives = 61/152 (40%), Gaps = 2/152 (1%)
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
E + L + N G + + S + G ++ M E ++
Sbjct: 117 EEFSQRLAANDNQGAYDLAKADESVLGQVLAAGLAKVSKGYNKALEAMQEVGEEESMKLE 176
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV--VSIPGIIESLISILLGLC 187
+LS++ + + ++G+ G V GM+ FQ IA S GI +L + L+GL
Sbjct: 177 HRLSYMALIGNLSPMIGLFGTVQGMISSFQVIALGGSTPKPSDLAAGISTALFTTLVGLA 236
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
V+IP+ AYN + +++ + +
Sbjct: 237 VAIPAIAAYNILRNRVARLLLEVGVESENLMS 268
>gi|332140184|ref|YP_004425922.1| putative Tol protein [Alteromonas macleodii str. 'Deep ecotype']
gi|327550206|gb|AEA96924.1| putative Tol protein [Alteromonas macleodii str. 'Deep ecotype']
Length = 454
Score = 93.7 bits (232), Expect = 2e-17, Method: Composition-based stats.
Identities = 30/124 (24%), Positives = 60/124 (48%), Gaps = 1/124 (0%)
Query: 97 KSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMG 156
+ + P + ++ + AI E+ ++ L+ + +S L+G+LG V GM+
Sbjct: 325 RVLKVRDQYPNADVEALELHLTEAILGEVPKLGRNLTIIKIISVVAPLMGLLGTVTGMIN 384
Query: 157 FFQSIAGYYSNN-VVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFAN 215
FQ+I + + + + GI +L++ +LGL V+IP ++ Y SK ++ A+
Sbjct: 385 TFQAITLFGTGDPKLMAGGISTALVTTVLGLVVAIPMTLLYAMLNTRSKNIVYILQEQAS 444
Query: 216 EFSA 219
A
Sbjct: 445 GVIA 448
>gi|148549022|ref|YP_001269124.1| MotA/TolQ/ExbB proton channel [Pseudomonas putida F1]
gi|148513080|gb|ABQ79940.1| MotA/TolQ/ExbB proton channel [Pseudomonas putida F1]
Length = 224
Score = 93.7 bits (232), Expect = 2e-17, Method: Composition-based stats.
Identities = 40/224 (17%), Positives = 92/224 (41%), Gaps = 19/224 (8%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+++ L G + + + SI++ ++++++ R W +
Sbjct: 12 FTVWELVKSGGWM----MLPIILSSIVAMAIVVERLWTLRASRVTPPHLLGQVWMWIKDK 67
Query: 71 TV-CKSLKN-HHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ LK + L I + ++ + + + ++ A +R + E+
Sbjct: 68 QLTSDKLKALRADSPLGEILAAGLANSRHGR-----------EIMKECIEEAASRVIHEL 116
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYY--SNNVVSIPGIIESLISILLGL 186
+S LG++++ L+G+LG VLGM+ F + G +N V GI ++L++ GL
Sbjct: 117 ERYISTLGTIAAMAPLLGLLGTVLGMIDIFSAFMGSQMTANAAVLAGGISKALVTTAAGL 176
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
V IP+ + + + + ME A + ++ E ++
Sbjct: 177 MVGIPAVFFHRFLLRRIDELVVGMEQEAIKLVEVIQGDREVEVA 220
>gi|156972958|ref|YP_001443865.1| biopolymer transport protein [Vibrio harveyi ATCC BAA-1116]
gi|156524552|gb|ABU69638.1| hypothetical protein VIBHAR_00636 [Vibrio harveyi ATCC BAA-1116]
Length = 453
Score = 93.3 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 31/117 (26%), Positives = 57/117 (48%), Gaps = 1/117 (0%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-V 169
+ ++ +D I R I +S + +S L+G+LG V+GM+G FQ+I + + +
Sbjct: 333 EDLEAKLDEIILRNAPSIERFISSIKLFASVAPLLGLLGTVMGMIGTFQAITLFGTGDPK 392
Query: 170 VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+ GI E+L++ +LGL V+IP Y ++ +E + F A +
Sbjct: 393 LMAGGISEALVTTMLGLVVAIPLLFLYTIVHSKGRRLVQTLEEQSAGFIARYQEKLH 449
>gi|153833914|ref|ZP_01986581.1| TolR [Vibrio harveyi HY01]
gi|148869752|gb|EDL68729.1| TolR [Vibrio harveyi HY01]
Length = 453
Score = 93.3 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 31/117 (26%), Positives = 57/117 (48%), Gaps = 1/117 (0%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-V 169
+ ++ +D I R I +S + +S L+G+LG V+GM+G FQ+I + + +
Sbjct: 333 EDLEAKLDEIILRNAPSIERFISSIKLFASVAPLLGLLGTVMGMIGTFQAITLFGTGDPK 392
Query: 170 VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+ GI E+L++ +LGL V+IP Y ++ +E + F A +
Sbjct: 393 LMAGGISEALVTTMLGLVVAIPLLFLYTIVHSKGRRLVQTLEEQSAGFIARYQEKLH 449
>gi|27366804|ref|NP_762331.1| MotA/TolQ/ExbB proton channel family protein [Vibrio vulnificus
CMCP6]
gi|27358371|gb|AAO07321.1| MotA/TolQ/ExbB proton channel family protein [Vibrio vulnificus
CMCP6]
Length = 455
Score = 93.3 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 39/218 (17%), Positives = 85/218 (38%), Gaps = 29/218 (13%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
S+ F G+ K I LL + + + + + +T + + R +
Sbjct: 250 AHSPSLADRFAAGGVVGKVIFALLA----VGLVIALYRGILLLTTKSKIRLQLKQ----- 300
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
L N+ + A++ + + ++ + I E
Sbjct: 301 -----PNQLGNNPLGRVLAVY--------------DKDRPRSVEALELRLLETIVDEQTG 341
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-VVSIPGIIESLISILLGL 186
+ + LS L +++ ++G+LG V+GM+ FQ I + + + V GI +L++ +LGL
Sbjct: 342 LEKGLSMLKLLAALAPMLGLLGTVIGMIETFQVITQFGNGDPKVMASGISMALVTTVLGL 401
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
++P +A+N +++ +E A + Q
Sbjct: 402 VAAMPLLLAHNVLSGWAEEIRSILEKQGIGLVAQQAEQ 439
>gi|106879758|emb|CAJ90448.1| putative MotA-TolQ-ExbB proton channel protein [Leptospira biflexa
serovar Patoc strain 'Patoc 1 (Paris)']
Length = 296
Score = 93.3 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 45/200 (22%), Positives = 87/200 (43%), Gaps = 15/200 (7%)
Query: 25 KCIITLLFIFSILSWSVIIQKSVNFIT-LRRQFREFEQLFW---SGQSLETVCKSLKNHH 80
K I ++ + SIL+ +V I++ + + ++ + L+ K L++H
Sbjct: 87 KIIFLVMLLASILAIAVFIERLIVYKRNFNKESESLLDSLTLLIRHRDLKGTEKLLESHP 146
Query: 81 NIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSS 140
F+ + E +K KG + +M+ I +E + E+L L ++ +
Sbjct: 147 MENSYTRFIHFVLEREKENHKG----------LSELMEGKILKEKLSLEERLPILNTLGN 196
Query: 141 AGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKF 199
+G+LG VLG++ F + ++ V + I +L++ GL V+IP +A N F
Sbjct: 197 NTPFIGLLGTVLGVIKAFYGLGTLGNSGAEVVMRSISTALLATAAGLAVAIPVVMANNYF 256
Query: 200 IEDSKKFAMQMEGFANEFSA 219
K Q+E + E A
Sbjct: 257 TRKMKLVIGQLEILSKEIHA 276
>gi|283779768|ref|YP_003370523.1| MotA/TolQ/ExbB proton channel [Pirellula staleyi DSM 6068]
gi|283438221|gb|ADB16663.1| MotA/TolQ/ExbB proton channel [Pirellula staleyi DSM 6068]
Length = 278
Score = 93.3 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 37/205 (18%), Positives = 79/205 (38%), Gaps = 16/205 (7%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFW---SGQSLETVCKSLKNHHNI 82
+I +L S+++ I++ S++ R E + L+ + ++ N
Sbjct: 81 GVIIILL--SMVAVGFIVEHSLSIRKSRLMPEEALDQLEEWIAAGDLDAATQFCEDPRNH 138
Query: 83 GLA-AIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSA 141
LA + ++ ++ ++ S A +++ A + K L + +
Sbjct: 139 SLATDVILAGLTRFRSSQFGFAEYKSAVEE--------AGEDYTASLYRKTDVLSVIGAI 190
Query: 142 GLLVGILGAVLGMMGFFQSIAGYYSN--NVVSIPGIIESLISILLGLCVSIPSSIAYNKF 199
++G+ G V GMM F +IA I ++L++ LGL V+IP+ +A++ F
Sbjct: 191 APMLGLFGTVEGMMESFNTIAESGGMARPDQLADSIGKALVTTWLGLLVAIPAMVAFSIF 250
Query: 200 IEDSKKFAMQMEGFANEFSAILSRQ 224
+ L R+
Sbjct: 251 RNKIDSIVSECGKRVERVLLPLGRK 275
>gi|70729160|ref|YP_258896.1| MotA/TolQ/ExbB proton channel family protein [Pseudomonas
fluorescens Pf-5]
gi|68343459|gb|AAY91065.1| MotA/TolQ/ExbB proton channel family protein [Pseudomonas
fluorescens Pf-5]
Length = 208
Score = 93.3 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 42/219 (19%), Positives = 86/219 (39%), Gaps = 19/219 (8%)
Query: 16 LFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKS 75
+ G + + + SI + +I ++ R W + + K
Sbjct: 1 MVKSGGWM----MLPIILSSIAAVGIIAERLWTLRASRVTPPHLLGQVWRWIKDKQLNKE 56
Query: 76 L--KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLS 133
+ + L I + ++ K + + ++ A AR + E+ L+
Sbjct: 57 KLKELRADSPLGEILAAGLANSKHGR-----------EIMKECIEEAAARVIHELERYLN 105
Query: 134 FLGSMSSAGLLVGILGAVLGMMGFFQSIAGYY--SNNVVSIPGIIESLISILLGLCVSIP 191
LG++++ L+G+LG VLGM+ F S G +N + GI ++LI+ GL V IP
Sbjct: 106 ALGTIAAMAPLLGLLGTVLGMIDIFSSFMGSGMTTNAHILAGGISKALITTAAGLMVGIP 165
Query: 192 SSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
S + + + ME A + ++ + +++
Sbjct: 166 SVFFHRFLQRRVDELVVGMEQEAIKLVEVIQGDRDVDLA 204
>gi|325105674|ref|YP_004275328.1| outer membrane transport energization protein ExbB [Pedobacter
saltans DSM 12145]
gi|324974522|gb|ADY53506.1| outer membrane transport energization protein ExbB [Pedobacter
saltans DSM 12145]
Length = 275
Score = 93.3 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 41/206 (19%), Positives = 89/206 (43%), Gaps = 11/206 (5%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITL--RRQFREFE---QLFWSG 66
+ + + G+ V + +F+ I+ I++ + F Q F S
Sbjct: 60 NYLGMIYKGGIVVPF-LIGMFLMVIV---FSIERFFVISKAAGKGNVDAFVKKVQSFLSS 115
Query: 67 QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
++++ +AA+ S + ++K+ + I + ++ A A E+
Sbjct: 116 GNIDSAISECDKQKGS-VAAVIKSGLLKYKEVESDTVMNTEQKCLAIQKDIEEATALEMP 174
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISILLG 185
+ + L+ + ++ S G LVG+LG V+GM+ F ++A + + ++ GI E+LI+ G
Sbjct: 175 MLEQNLTVVSTLVSIGTLVGLLGTVVGMIKAFAALATAGAPDQAALANGISEALINTATG 234
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQME 211
+ S + I+YN F ++
Sbjct: 235 IGTSTLAIISYNFFTSKIDSLTYSID 260
>gi|260060705|ref|YP_003193785.1| putative biopolymer transport protein [Robiginitalea biformata
HTCC2501]
gi|88784835|gb|EAR16004.1| putative biopolymer transport protein [Robiginitalea biformata
HTCC2501]
Length = 220
Score = 93.3 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 35/199 (17%), Positives = 80/199 (40%), Gaps = 18/199 (9%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLR----RQFREFEQLFWSGQSLETVCKSLKNHHNIG 83
+ ++ + IL +V I++ + + ++ E SG K + +
Sbjct: 30 MGIVLLCLILGLAVAIERIIYLNMASTNTTKLKQQVEDALASGGV--EAAKEVCRNTKGP 87
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
+A+I+ + +S + ++ + ++ ++ + +S+L +
Sbjct: 88 VASIYYQGLDRAGES-----------IESAEKAVVAYGGVQMGQLEKNVSWLSLFIAIAP 136
Query: 144 LVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIPSSIAYNKFIED 202
++G +G V+GM+ FQ I+ + + I G I +L++ + GL +I I YN I
Sbjct: 137 MLGFMGTVIGMIQAFQKISAVGNLSASLIAGDIQVALLTTVFGLITAIILQIFYNYIIAK 196
Query: 203 SKKFAMQMEGFANEFSAIL 221
ME + +L
Sbjct: 197 IDSIVNDMEDSSIILIDML 215
>gi|304437088|ref|ZP_07397051.1| MotA/TolQ/ExbB proton channel family protein [Selenomonas sp. oral
taxon 149 str. 67H29BP]
gi|304370039|gb|EFM23701.1| MotA/TolQ/ExbB proton channel family protein [Selenomonas sp. oral
taxon 149 str. 67H29BP]
Length = 208
Score = 92.9 bits (230), Expect = 3e-17, Method: Composition-based stats.
Identities = 40/219 (18%), Positives = 84/219 (38%), Gaps = 14/219 (6%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
++ LF + G ++ LL + S+ ++ + + + + + RE E
Sbjct: 1 MTSAELFEKGGP----VMYLLLLCSLTVAAIAVDRFLLYRRASQGARELE---------A 47
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
TV +SL+ H +A + + A + + ++ A +
Sbjct: 48 TVAESLRKHKMDEVA-PAVEGKDNMVAHLVRSALDARKAGEDVPMTLEGAYGEAAMLLRA 106
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSI 190
+L++L + + L+G+LG + GM+ F + GI E+L++ GL V+I
Sbjct: 107 RLNYLSMIVTLAPLLGLLGTISGMIQSFSIFNLQAGQPMAITGGIGEALVATATGLFVAI 166
Query: 191 PSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNI 229
S + + F + +E N A + G +
Sbjct: 167 FSLVVHTYFAQRLDVMLTLLEKTMNTVLAGFAAADGGKV 205
>gi|312888738|ref|ZP_07748303.1| outer membrane transport energization protein ExbB (TC 2.C.1.1.1)
[Mucilaginibacter paludis DSM 18603]
gi|311298782|gb|EFQ75886.1| outer membrane transport energization protein ExbB (TC 2.C.1.1.1)
[Mucilaginibacter paludis DSM 18603]
Length = 235
Score = 92.9 bits (230), Expect = 3e-17, Method: Composition-based stats.
Identities = 35/230 (15%), Positives = 85/230 (36%), Gaps = 20/230 (8%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
+ L ++ L ++ G ++ + I ++L + ++ +
Sbjct: 22 VQPGALPQEELRFGDLLIKGGW----VMVPIGILAVLGLVIFFERYFTIRKASKDESNLM 77
Query: 61 QLFWSG---QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMM 117
S L++ KN N L + + + I+ +
Sbjct: 78 AQVRSSIISGKLDSAVAICKN-SNSPLGRMLQKGLLRIGRPIKD-----------IEGAI 125
Query: 118 DVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGII 176
+ E+ ++ + ++ LG ++ + G LG + G++ F I+ + ++ I G+
Sbjct: 126 ENIGKLEVSKLEKNIAILGIVAGIAPMFGFLGTIAGVIKIFYDISKTDNISMGVISGGLY 185
Query: 177 ESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+++ GL V I + + YN K +++E A EF +L ++
Sbjct: 186 VKMVTSAAGLLVGIIAYVLYNVLNIMVDKVILKLETDAIEFIDLLEEPSK 235
>gi|302337651|ref|YP_003802857.1| MotA/TolQ/ExbB proton channel [Spirochaeta smaragdinae DSM 11293]
gi|301634836|gb|ADK80263.1| MotA/TolQ/ExbB proton channel [Spirochaeta smaragdinae DSM 11293]
Length = 231
Score = 92.9 bits (230), Expect = 3e-17, Method: Composition-based stats.
Identities = 29/128 (22%), Positives = 53/128 (41%), Gaps = 2/128 (1%)
Query: 103 ARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA 162
++ +D +D + E+ L L + + L+G+LG V G+M F I
Sbjct: 94 LEDRRSTKEALDEAVDREGSAIRREMDRGLEALSVIGNIAPLMGLLGTVTGLMRAFHRIE 153
Query: 163 GYYSNNVVSI--PGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAI 220
++ GI E++I+ +GL V+IP+ + F + ++ M + S
Sbjct: 154 SLGGTVDIAAFSGGIWEAMITTAIGLIVAIPAVVFCRVFEKIVERRGEDMGYVVSLVSES 213
Query: 221 LSRQTEGN 228
L T N
Sbjct: 214 LHEGTVEN 221
>gi|163802271|ref|ZP_02196166.1| putative TolR [Vibrio sp. AND4]
gi|159174076|gb|EDP58886.1| putative TolR [Vibrio sp. AND4]
Length = 453
Score = 92.9 bits (230), Expect = 3e-17, Method: Composition-based stats.
Identities = 30/117 (25%), Positives = 56/117 (47%), Gaps = 1/117 (0%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-V 169
+ ++ +D I R I + + +S L+G+LG V+GM+G FQ+I + + +
Sbjct: 333 EDLEAKLDEIILRNAPSIERFIGSIKLFASVAPLLGLLGTVMGMIGTFQAITLFGTGDPK 392
Query: 170 VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+ GI E+L++ +LGL V+IP Y ++ +E + F A +
Sbjct: 393 LMAGGISEALVTTMLGLVVAIPLLFLYTIVHSKGRRLVQTLEEQSAGFIARYQEKLH 449
>gi|92113740|ref|YP_573668.1| MotA/TolQ/ExbB proton channel [Chromohalobacter salexigens DSM
3043]
gi|91796830|gb|ABE58969.1| outer membrane transport energization protein ExbB
[Chromohalobacter salexigens DSM 3043]
Length = 469
Score = 92.9 bits (230), Expect = 3e-17, Method: Composition-based stats.
Identities = 45/214 (21%), Positives = 82/214 (38%), Gaps = 37/214 (17%)
Query: 12 SIFALFMQMG-----LAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG 66
+++ F Q G + V I LL S + + + LRRQ R + L
Sbjct: 268 TLWERFQQGGAVGYVIVVLGIAGLLVALSQY-----VYLLLVSVRLRRQLRSPDAL---- 318
Query: 67 QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
+ L + A + ++ +D A+ E
Sbjct: 319 ------------RDDNPLGRV----------LGRFAALGREHAPEALEARLDEALLAEKP 356
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV-SIPGIIESLISILLG 185
+ + M++ L+G+LG V GM+G FQSI + + + GI ++L++ +LG
Sbjct: 357 RLERGQPLVKLMAAVAPLLGLLGTVTGMIGTFQSITVFGTGDPQLMAGGISQALVTTVLG 416
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
L ++P A+ S++ +EG A+ A
Sbjct: 417 LIAAVPLLFAHTALSSRSRELLGTLEGRASAVLA 450
>gi|85711177|ref|ZP_01042237.1| TonB system biopolymer transport component [Idiomarina baltica
OS145]
gi|85695090|gb|EAQ33028.1| TonB system biopolymer transport component [Idiomarina baltica
OS145]
Length = 458
Score = 92.9 bits (230), Expect = 3e-17, Method: Composition-based stats.
Identities = 34/122 (27%), Positives = 64/122 (52%), Gaps = 1/122 (0%)
Query: 106 PIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYY 165
P + ++ + I RE+ +IT L+F+ +S L+G+LG V GM+ FQ+I +
Sbjct: 337 PDADTETLELKLSEGILREVPKITRNLTFIKIISVVAPLMGLLGTVTGMINTFQAITLFG 396
Query: 166 SNN-VVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+ + + GI ++L++ +LGL V+IP ++ + SK ++ A+ A S +
Sbjct: 397 TGDPKMMAGGISQALVTTVLGLVVAIPMTLLFAMLHTRSKNMIHILQEQASGIIAERSER 456
Query: 225 TE 226
E
Sbjct: 457 GE 458
>gi|160877473|ref|YP_001556789.1| MotA/TolQ/ExbB proton channel [Shewanella baltica OS195]
gi|160862995|gb|ABX51529.1| MotA/TolQ/ExbB proton channel [Shewanella baltica OS195]
gi|315269677|gb|ADT96530.1| MotA/TolQ/ExbB proton channel [Shewanella baltica OS678]
Length = 308
Score = 92.9 bits (230), Expect = 3e-17, Method: Composition-based stats.
Identities = 39/200 (19%), Positives = 80/200 (40%), Gaps = 17/200 (8%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITL----RRQFREFEQLFWSGQSLETVCKSLKNHHN 81
++ +L + S+++ ++++ K + F R+ R+ L+ G+ E + L
Sbjct: 88 TVVVILVLMSLVAMTIVLMKLIQFQRAGLWQRKPARQALALWQQGKQEEAL--QLAAVSR 145
Query: 82 IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSA 141
A A+ + + + ++ L ++ L L + S
Sbjct: 146 NPTAQAMAQAIRGITRQLPESLVR--------EEVLRYGCNA-LFQLRRGLRPLEVIGSL 196
Query: 142 GLLVGILGAVLGMMGFFQSIAGYYS--NNVVSIPGIIESLISILLGLCVSIPSSIAYNKF 199
L+G+LG V+GM+ FQ + + N + GI E+L++ +GLCV+IP N
Sbjct: 197 SPLLGLLGTVMGMIAAFQQLQAAGNKVNPAILSGGIWEALLTTAVGLCVAIPVVALLNYL 256
Query: 200 IEDSKKFAMQMEGFANEFSA 219
A +M+ +
Sbjct: 257 ERRVDHLAHEMDNLVTQLFT 276
>gi|167032484|ref|YP_001667715.1| MotA/TolQ/ExbB proton channel [Pseudomonas putida GB-1]
gi|166858972|gb|ABY97379.1| MotA/TolQ/ExbB proton channel [Pseudomonas putida GB-1]
Length = 224
Score = 92.9 bits (230), Expect = 3e-17, Method: Composition-based stats.
Identities = 40/224 (17%), Positives = 91/224 (40%), Gaps = 19/224 (8%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+++ L G + + + SI + ++++++ R W +
Sbjct: 12 FTVWELVKSGGWM----MLPIILSSIAAMAIVVERLWTLRASRVTPPHLLGQVWMWIKDK 67
Query: 71 TV-CKSLKN-HHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ LK + L I + ++ + + + ++ A +R + E+
Sbjct: 68 QLTSDKLKALRADSPLGEILAAGLANSRHGR-----------EIMKECIEEAASRVIHEL 116
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYY--SNNVVSIPGIIESLISILLGL 186
+S LG++++ L+G+LG VLGM+ F + G +N V GI ++L++ GL
Sbjct: 117 ERYISTLGTIAAMAPLLGLLGTVLGMIDIFSAFMGSQMTANAAVLAGGISKALVTTAAGL 176
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
V IP+ + + + + ME A + ++ E ++
Sbjct: 177 MVGIPAVFFHRFLLRRIDELVVGMEQEAIKLVEVIQGDREVEVA 220
>gi|95929767|ref|ZP_01312508.1| MotA/TolQ/ExbB proton channel [Desulfuromonas acetoxidans DSM 684]
gi|95134063|gb|EAT15721.1| MotA/TolQ/ExbB proton channel [Desulfuromonas acetoxidans DSM 684]
Length = 196
Score = 92.9 bits (230), Expect = 3e-17, Method: Composition-based stats.
Identities = 42/206 (20%), Positives = 83/206 (40%), Gaps = 24/206 (11%)
Query: 14 FALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVC 73
+ GL ++ L + S++ W +I K + F RR+ SL+
Sbjct: 9 LDMIRHGGL----VMWPLLVSSLVMWLMIFYKGLLFFQARRE----------EVSLKQCR 54
Query: 74 KSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLS 133
++L IG A + + ++ + + + R+ E+ +
Sbjct: 55 QALIEQRYIG-AFWQQNILRQFIWLREHQSLDRDHLL--------QLQQRQSNEVDRFIG 105
Query: 134 FLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPS 192
+ ++SA L+G+LG V GM+ F I+ + + N GI E+LI+ GL V++P
Sbjct: 106 TILVLASAAPLMGLLGTVSGMITTFNVISVFGTGNARAMAAGISEALITTQAGLVVAVPG 165
Query: 193 SIAYNKFIEDSKKFAMQMEGFANEFS 218
I +++ +M+ F+
Sbjct: 166 LILGALLYRRAEQMKERMQRFSLRLL 191
>gi|254445763|ref|ZP_05059239.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Verrucomicrobiae bacterium DG1235]
gi|198260071|gb|EDY84379.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Verrucomicrobiae bacterium DG1235]
Length = 231
Score = 92.9 bits (230), Expect = 3e-17, Method: Composition-based stats.
Identities = 41/217 (18%), Positives = 85/217 (39%), Gaps = 19/217 (8%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVII-----QKSVNFITLRRQFREFEQLFWSG 66
S+F++ Q G A + L S++ + I + F + ++ F +
Sbjct: 28 SLFSMIQQGGWA----MYPLAACSLVFIYIAIHCYRETRPSRFAPAQ-LLQQLTTHFANA 82
Query: 67 QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
K H + + + K ++ + + A++ +
Sbjct: 83 N-----FDHAKQHAQASDTVLARALSIAFPKLDPTALNE---TREPFETEVGAALSAQEN 134
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLG 185
I++ + +L +++ ++G+LG V GM+G FQ+++ G I E+LI+ G
Sbjct: 135 AISQWIHYLSVIANVAPMIGLLGTVSGMIGGFQTMSAGGMGRPELFAGDIGEALITTATG 194
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
LC+ IP+ IA++ F AN + L+
Sbjct: 195 LCIGIPAMIAHSYFNNRLNTAITNTTRQANTLTDHLN 231
>gi|146282977|ref|YP_001173130.1| MotA/TolQ/ExbB proton channel family protein [Pseudomonas stutzeri
A1501]
gi|145571182|gb|ABP80288.1| MotA/TolQ/ExbB proton channel family protein [Pseudomonas stutzeri
A1501]
Length = 199
Score = 92.9 bits (230), Expect = 3e-17, Method: Composition-based stats.
Identities = 40/202 (19%), Positives = 82/202 (40%), Gaps = 14/202 (6%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVC-KSLKN-HHNIGLA 85
+ + + SI + +I ++ R W + + + LK + L
Sbjct: 1 MLPIILCSIAAAGIIAERLWTLRPSRVTPPHLLGQVWKWIKDKKLSNQKLKELRADSPLG 60
Query: 86 AIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLV 145
I + +S K+ + + ++ A AR + ++ L+ LG+++ L+
Sbjct: 61 EILAAGLSNSKRGR-----------EIMKECIEEAAARVVHDLERYLNALGTIAGIAPLL 109
Query: 146 GILGAVLGMMGFFQSIAGYY-SNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSK 204
G+LG VLGM+ F + G +N + GI ++LI+ GL V IP+ +
Sbjct: 110 GLLGTVLGMIEIFSAFMGSGMANAPLLAGGIAKALITTAAGLMVGIPALFFHRFLQRRVD 169
Query: 205 KFAMQMEGFANEFSAILSRQTE 226
+ + ME A + ++ +
Sbjct: 170 ELVVGMEQEAIKLVEVVQGDRD 191
>gi|332876995|ref|ZP_08444748.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Capnocytophaga sp. oral taxon 329 str. F0087]
gi|332685103|gb|EGJ57947.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Capnocytophaga sp. oral taxon 329 str. F0087]
Length = 243
Score = 92.9 bits (230), Expect = 3e-17, Method: Composition-based stats.
Identities = 34/197 (17%), Positives = 78/197 (39%), Gaps = 14/197 (7%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE--TVCKSLKNHHNIGLA 85
+ + + I+ +V I++ + ++ S + K + +A
Sbjct: 52 MAPILLCLIIGLAVAIERIIYLNMATTNSKKLIADIESALDSKGIEAAKEVCRDTKGPVA 111
Query: 86 AIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLV 145
+IF + RS GI D +++ + ++ ++ + +S++ + ++
Sbjct: 112 SIFYQGLD----------RSSEGI-DMVEKSVVSYGGVQMGQLEKNVSWISLFIAIAPML 160
Query: 146 GILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIPSSIAYNKFIEDSK 204
G +G V+GM+ F I+ + I G I +L++ + GL V++ + YN I
Sbjct: 161 GFMGTVIGMIEAFDKISTAGGLDASLIAGDIKVALLTTVFGLIVAMILQVFYNYIIAKID 220
Query: 205 KFAMQMEGFANEFSAIL 221
ME + +L
Sbjct: 221 AIVNDMEDASISLIDLL 237
>gi|229591209|ref|YP_002873328.1| putative biopolymer transport protein [Pseudomonas fluorescens
SBW25]
gi|229363075|emb|CAY50060.1| putative biopolymer transport protein [Pseudomonas fluorescens
SBW25]
Length = 211
Score = 92.9 bits (230), Expect = 3e-17, Method: Composition-based stats.
Identities = 46/220 (20%), Positives = 87/220 (39%), Gaps = 23/220 (10%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS---GQSL 69
++ L G + + + SI + ++ ++ R WS + L
Sbjct: 1 MWELVKSGGWM----MLPIIMSSIAALGIVAERLWTLRASRVTPEHLLGQVWSWIKNKQL 56
Query: 70 ETVCKSLKN-HHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ LK N L I + ++ K + + ++ A AR + E+
Sbjct: 57 DK--DKLKELRANSPLGEILAAGLANSKHGR-----------EIMKECIEEAAARVIHEL 103
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYY--SNNVVSIPGIIESLISILLGL 186
++ LG++++ L+G+LG VLGM+ F S G +N V GI ++LI+ GL
Sbjct: 104 ERYINALGTIAAMAPLLGLLGTVLGMIDIFSSFMGSGMTTNAAVLAGGISKALITTAAGL 163
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
V IPS + + + ME A + ++ +
Sbjct: 164 MVGIPSVFFHRFLQRRIDELVVGMEQEAIKLVEVVQGDRD 203
>gi|120434458|ref|YP_860162.1| ExbB-like MotA/TolQ/ExbB family biopolymer transport protein
[Gramella forsetii KT0803]
gi|117576608|emb|CAL65077.1| ExbB-like MotA/TolQ/ExbB family biopolymer transport protein
[Gramella forsetii KT0803]
Length = 267
Score = 92.9 bits (230), Expect = 3e-17, Method: Composition-based stats.
Identities = 33/199 (16%), Positives = 78/199 (39%), Gaps = 18/199 (9%)
Query: 28 ITLLFIFSILSWSVIIQKSVNF----ITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIG 83
+ ++ + IL ++ I++ + R+ ++ E SG K + +
Sbjct: 73 MGIVLLCLILGLAIAIERIIFLNLSTTNTRKLAQDVEDALNSGGV--EAAKEVCRNTKGP 130
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
+A+I+ + +S + ++ + ++ ++ + +S++ +
Sbjct: 131 VASIYYQGLDRADES-----------IEAAEKAVVAYGGVQMGQLEKNVSWVSLFIALAP 179
Query: 144 LVGILGAVLGMMGFFQSIAGYYS-NNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIED 202
++G +G V+GM+ F I + GI +L++ + GL V+I I YN I
Sbjct: 180 MLGFMGTVIGMIQAFDRIEAAGDMQPSLVAGGIKVALLTTVFGLIVAIILQIFYNYIIAK 239
Query: 203 SKKFAMQMEGFANEFSAIL 221
ME + +L
Sbjct: 240 IDSIVNDMEDASIILIDML 258
>gi|163786286|ref|ZP_02180734.1| putative biopolymer transport protein [Flavobacteriales bacterium
ALC-1]
gi|159878146|gb|EDP72202.1| putative biopolymer transport protein [Flavobacteriales bacterium
ALC-1]
Length = 231
Score = 92.9 bits (230), Expect = 3e-17, Method: Composition-based stats.
Identities = 32/190 (16%), Positives = 68/190 (35%), Gaps = 15/190 (7%)
Query: 40 SVIIQKSVNFITLRRQFREFEQLFWS--GQSLETVCKSLKNHHNIGLAAIFMSAMSEWKK 97
+ ++ + F + L N ++ + ++ K
Sbjct: 53 YIYFERIFAIKAASKVDSNFMNQIKDHVSNGKVDSAQMLCAQQNSPVSRLIAKGITRIGK 112
Query: 98 SCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGF 157
+ I+ ++ A E+ + + +S L ++S ++G LG V+GM+
Sbjct: 113 PL-----------EDINTAIENAGRLEVYGLEKNVSVLATISGVAPMIGFLGTVVGMILS 161
Query: 158 FQSIAGYYSN--NVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFAN 215
+A V G+ ++ + + GL V I + +AYN + + K ME +
Sbjct: 162 IFELANAGGTIQMDVLASGLYTAMTTTVGGLVVGIIAYVAYNHIVVKTNKVVHSMEANSV 221
Query: 216 EFSAILSRQT 225
EF L+
Sbjct: 222 EFLDHLNEPI 231
>gi|320529067|ref|ZP_08030159.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Selenomonas artemidis F0399]
gi|320138697|gb|EFW30587.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Selenomonas artemidis F0399]
Length = 199
Score = 92.9 bits (230), Expect = 3e-17, Method: Composition-based stats.
Identities = 39/205 (19%), Positives = 80/205 (39%), Gaps = 21/205 (10%)
Query: 14 FALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG---QSLE 70
LF GL ++ L + S++++++ +++ + R+ R F + + +
Sbjct: 1 MHLFKSGGL----VMYPLLLLSLITFAIAVERFYYYRINRKGSRVFFHGVYHAAVQKDFD 56
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
T+ K K + I M+ ++ KGA S + I+
Sbjct: 57 TIEKLCKEFPSAISRVIESGLMNAGTETTMKGAFSDRMSMEAINFR-------------R 103
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSI 190
L +L ++ + L+G+LG V GM+ F + ++ + E+L++ GLCV+I
Sbjct: 104 YLDYLSAIVTIAPLLGLLGTVTGMIQTFSVLDEGGGAGAITGG-VGEALVATASGLCVAI 162
Query: 191 PSSIAYNKFIEDSKKFAMQMEGFAN 215
+ Y F E +
Sbjct: 163 IAFCVYTYFSHQLDAIVTDTERLCS 187
>gi|149176358|ref|ZP_01854972.1| probable biopolymer transport ExbB-related protein [Planctomyces
maris DSM 8797]
gi|148844710|gb|EDL59059.1| probable biopolymer transport ExbB-related protein [Planctomyces
maris DSM 8797]
Length = 324
Score = 92.9 bits (230), Expect = 3e-17, Method: Composition-based stats.
Identities = 47/199 (23%), Positives = 85/199 (42%), Gaps = 17/199 (8%)
Query: 32 FIFSILSWSVIIQKSVNFITLR---RQF-REFEQLFWSGQSLETVCKSLKNHHNIGLAAI 87
I SI+S II++ V + R R F F +L G+ L + + +A++
Sbjct: 104 VIASIISMWFIIERLVILRSGRVIPRHFVTRFLKLLKDGKLNSRSALKLCDENPSPIASV 163
Query: 88 FMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGI 147
F + +W K I D +R + ++ + L + +++ L+G+
Sbjct: 164 FAHGIRKWGK---PSVEVEQAIIDGGERQL--------SQLRKHLRVINGVATVAPLMGL 212
Query: 148 LGAVLGMMGFFQSIAGYYSNNVV--SIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKK 205
LG V+GM+ F IA + GI +L++ LGL ++IPS I Y
Sbjct: 213 LGTVIGMILAFNDIANSSAMGKAEELAGGIALALLTTALGLGIAIPSLIMYMYLAGRVDG 272
Query: 206 FAMQMEGFANEFSAILSRQ 224
M+M+ A + ++S +
Sbjct: 273 LVMEMDQSAQDLVHLISAE 291
>gi|85712661|ref|ZP_01043707.1| TonB system biopolymer transport component [Idiomarina baltica
OS145]
gi|85693511|gb|EAQ31463.1| TonB system biopolymer transport component [Idiomarina baltica
OS145]
Length = 456
Score = 92.9 bits (230), Expect = 3e-17, Method: Composition-based stats.
Identities = 45/216 (20%), Positives = 89/216 (41%), Gaps = 28/216 (12%)
Query: 5 GLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFW 64
GL ++ + Q G I +L I I+S ++ +V +R Q + E
Sbjct: 262 GLLTQKATLMERYHQGGTVGYVITVVLIIGLIISLFKLVTLTVVGGKMRSQLKNIEN--- 318
Query: 65 SGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARE 124
L + + + ++ + A + ++ +D AI RE
Sbjct: 319 -------------PSDKNPLGRV----LKVYHENKNADA-------ENLELKLDEAIMRE 354
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISIL 183
+I ++ + ++ L+G+LG V+GM+G FQSI + + + + G I +L++
Sbjct: 355 TPKIESGINVVKIFAAIAPLLGLLGTVVGMIGTFQSITLFGTGDPKIMAGDISMALVTTA 414
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
+GL +IP +A++ SK ++ A A
Sbjct: 415 MGLIAAIPLILAHSIVASRSKSIIHLLDEQAAGIVA 450
>gi|305665280|ref|YP_003861567.1| putative biopolymer transport protein [Maribacter sp. HTCC2170]
gi|88710035|gb|EAR02267.1| putative biopolymer transport protein [Maribacter sp. HTCC2170]
Length = 239
Score = 92.6 bits (229), Expect = 4e-17, Method: Composition-based stats.
Identities = 35/199 (17%), Positives = 80/199 (40%), Gaps = 18/199 (9%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLR----RQFREFEQLFWSGQSLETVCKSLKNHHNIG 83
+ ++ + IL +V I++ + + ++ E SG K + +
Sbjct: 49 MGIVLLCLILGLAVAIERIIYLNMATTNTTKLKQQVEDALASGGV--EAAKEVCRNTKGP 106
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
+A+I+ + +S + ++ + ++ ++ + +S+L +
Sbjct: 107 VASIYYQGLDRAGESV-----------ESAEKSVVAYGGVQMGQLEKNVSWLSLFIAIAP 155
Query: 144 LVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIPSSIAYNKFIED 202
++G +G V+GM+ FQ I+ + + I G I +L++ + GL +I I YN I
Sbjct: 156 MLGFMGTVIGMIQAFQKISAVGNLSASLIAGDIQVALLTTVFGLITAIILQIFYNYIIAK 215
Query: 203 SKKFAMQMEGFANEFSAIL 221
ME + +L
Sbjct: 216 IDSIVNDMEDSSISLIDML 234
>gi|320158687|ref|YP_004191065.1| motA/TolQ/ExbB proton channel family protein [Vibrio vulnificus
MO6-24/O]
gi|319933999|gb|ADV88862.1| MotA/TolQ/ExbB proton channel family protein [Vibrio vulnificus
MO6-24/O]
Length = 455
Score = 92.6 bits (229), Expect = 4e-17, Method: Composition-based stats.
Identities = 39/218 (17%), Positives = 85/218 (38%), Gaps = 29/218 (13%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
S+ F G+ K I LL + + + + + +T + + R +
Sbjct: 250 AHSPSLADRFAAGGVVGKVIFALLA----VGLVIALYRGILLLTTKSKIRLQLKQ----- 300
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
L N+ + A++ + + ++ + I E
Sbjct: 301 -----PNQLGNNPLGRVLAVY--------------DKDKPRSVEALELRLLETIVDEQTG 341
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-VVSIPGIIESLISILLGL 186
+ + LS L +++ ++G+LG V+GM+ FQ I + + + V GI +L++ +LGL
Sbjct: 342 LEKGLSMLKLLAALAPMLGLLGTVIGMIETFQVITQFGNGDPKVMASGISMALVTTVLGL 401
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
++P +A+N +++ +E A + Q
Sbjct: 402 VAAMPLLLAHNVLSGWAEEIRSILEKQGIGLVAQQAEQ 439
>gi|119503466|ref|ZP_01625549.1| TonB system biopolymer transport component [marine gamma
proteobacterium HTCC2080]
gi|119460528|gb|EAW41620.1| TonB system biopolymer transport component [marine gamma
proteobacterium HTCC2080]
Length = 473
Score = 92.6 bits (229), Expect = 4e-17, Method: Composition-based stats.
Identities = 27/124 (21%), Positives = 57/124 (45%), Gaps = 1/124 (0%)
Query: 97 KSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMG 156
+ P + ++ M + RE ++ L+ L +++ L+G+LG V GM+
Sbjct: 341 RVLKIHEDKPDMDPETLELKMAEGVLRETPKLEAGLTLLKIIAAVAPLMGLLGTVTGMII 400
Query: 157 FFQSIAGYYSNN-VVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFAN 215
FQ+I + + + GI +L++ +LGL V+IP+ + + +++ + A
Sbjct: 401 TFQAITIFGAGDPKAMAGGISSALVTTVLGLLVAIPTVLLHTIVNGRAQRIIHVINEQAT 460
Query: 216 EFSA 219
A
Sbjct: 461 GIVA 464
>gi|94501942|ref|ZP_01308451.1| MotA/TolQ/ExbB proton channel family protein [Oceanobacter sp.
RED65]
gi|94425936|gb|EAT10935.1| MotA/TolQ/ExbB proton channel family protein [Oceanobacter sp.
RED65]
Length = 220
Score = 92.6 bits (229), Expect = 4e-17, Method: Composition-based stats.
Identities = 41/198 (20%), Positives = 88/198 (44%), Gaps = 16/198 (8%)
Query: 21 GLAVKCIITLLFIFSILSWSVIIQKSVNFITL----RRQFREFEQLFWSGQSLETVCKSL 76
+ ++ LL +FSI + ++++ K + L + + +LF S + + V +
Sbjct: 9 DIIGGPVVLLLVLFSICASALVLIKLYQYWMLAPKDKVAADDLLRLF-SEDNTQAVLELS 67
Query: 77 KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLG 136
+N N + I + ++ D + + L + + L L
Sbjct: 68 ENQKNGRIQLIAQA---------QDMIQNNGLNMDHLKTELFRRARLLLRPLQDYLRPLE 118
Query: 137 SMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGLCVSIPSSI 194
+++ L+G+ G VLGM+ F+++ AG + V GI ++L++ +GL V+IP ++
Sbjct: 119 IIATLAPLLGLFGTVLGMIEAFKAMEAAGSQVDPAVLSGGIWQALLTTAVGLAVAIPVTL 178
Query: 195 AYNKFIEDSKKFAMQMEG 212
+ + ++ A QME
Sbjct: 179 IHGALEKRAENTAAQMEN 196
>gi|307545630|ref|YP_003898109.1| MotA/TolQ/ExbB proton channel [Halomonas elongata DSM 2581]
gi|307217654|emb|CBV42924.1| MotA/TolQ/ExbB proton channel [Halomonas elongata DSM 2581]
Length = 462
Score = 92.6 bits (229), Expect = 4e-17, Method: Composition-based stats.
Identities = 30/125 (24%), Positives = 57/125 (45%), Gaps = 1/125 (0%)
Query: 96 KKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMM 155
+ A + ++ +D A+ E + S + +++ L+G+LG V GM+
Sbjct: 314 RVLKRFHALGSGHAPEALEARLDEAMLAEQPRLERGQSLVKMLAAVAPLLGLLGTVTGMI 373
Query: 156 GFFQSIAGYYSNNVV-SIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFA 214
FQSI + + + GI ++L++ +LGL ++P A+ S+ MEG A
Sbjct: 374 VTFQSITVFGTGDPQLMAGGISQALVTTVLGLITAVPLLFAHTALSSRSRALIGTMEGRA 433
Query: 215 NEFSA 219
+ A
Sbjct: 434 SAVLA 438
>gi|78188527|ref|YP_378865.1| MotA/TolQ/ExbB proton channel family protein [Chlorobium
chlorochromatii CaD3]
gi|78170726|gb|ABB27822.1| outer membrane transport energization protein ExbB [Chlorobium
chlorochromatii CaD3]
Length = 247
Score = 92.6 bits (229), Expect = 4e-17, Method: Composition-based stats.
Identities = 28/155 (18%), Positives = 65/155 (41%), Gaps = 2/155 (1%)
Query: 65 SGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARE 124
+++ + H ++ A + + + +K + + +++ A
Sbjct: 86 QAGAIDRALERCNQHQSLH-ATVLGAVVERYKWLNTQQISEHEKRRQELEKAATDATTIA 144
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISIL 183
+ + L L +++S +VG+LG LGM+ F ++A + + + GI E+L +
Sbjct: 145 MPTLERNLVVLSTIASISTMVGLLGTTLGMIRAFAAMATNGAPDAAQLSLGISEALFNTA 204
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFS 218
LG+C I +A+N + +M+ A +
Sbjct: 205 LGICGGIFGIVAFNLLSNRVDRIGYEMDEAALKLI 239
>gi|331019521|gb|EGH99577.1| TonB system transport protein ExbB [Pseudomonas syringae pv.
lachrymans str. M302278PT]
Length = 131
Score = 92.6 bits (229), Expect = 4e-17, Method: Composition-based stats.
Identities = 32/119 (26%), Positives = 56/119 (47%), Gaps = 4/119 (3%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLA 85
+I LL IFS+ +W + + K V F L+ Q R+F + FW+ SL++ + L A
Sbjct: 14 AVIWLLVIFSVATWGLALLKGVQFSRLKAQDRKFHKQFWAASSLDSAAQ-LAQEQPGAAA 72
Query: 86 AIFMSAMSEWKK---SCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSA 141
+ ++ + + + I QDR++R + I RE + L+ L S+ S
Sbjct: 73 RVALAGYAAIQVPDGAQANDLSQSINHQDRLERALRQQIVRERRSLETGLAILASIGST 131
>gi|254786070|ref|YP_003073499.1| transporter proton channel domain containing protein
[Teredinibacter turnerae T7901]
gi|237684079|gb|ACR11343.1| transporter, proton channel domain containing protein
[Teredinibacter turnerae T7901]
Length = 450
Score = 92.2 bits (228), Expect = 5e-17, Method: Composition-based stats.
Identities = 44/216 (20%), Positives = 94/216 (43%), Gaps = 28/216 (12%)
Query: 5 GLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFW 64
GL + S+ Q G II + I + +++++ ++ + R + + +
Sbjct: 252 GLLVQSPSLMERIEQGGTVGYAIIIVGIIGML----IVLERMLSLMRTRSKMQRQLK--- 304
Query: 65 SGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARE 124
+L+ V + + + + M A E + + I R M I +
Sbjct: 305 ---NLDQVEE------DNPIGRV-MQAYFEHRHLD----------LETISRKMQEVIIHD 344
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-VVSIPGIIESLISIL 183
+ I LS + +++ L+G+LG V+GM+G FQ+I + + + + GI ++LI+ +
Sbjct: 345 MAGIRRGLSIVKVLAAVAPLMGLLGTVVGMIGTFQAITLFGTGDPKLMAGGISQALITTV 404
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
LGLC +IP ++++ + + + A A
Sbjct: 405 LGLCAAIPLLLSHSMLAARATQIGKMISEQAAGLMA 440
>gi|37676579|ref|NP_936975.1| biopolymer transport protein ExbB-related protein [Vibrio
vulnificus YJ016]
gi|37201122|dbj|BAC96945.1| biopolymer transport protein ExbB-related protein [Vibrio
vulnificus YJ016]
Length = 455
Score = 92.2 bits (228), Expect = 5e-17, Method: Composition-based stats.
Identities = 40/218 (18%), Positives = 83/218 (38%), Gaps = 29/218 (13%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
S+ F G+ K I LL + + + + + +T + + R
Sbjct: 250 AHSPSLADRFAAGGVVGKVIFALLA----VGLVIALYRGILLLTTKSKIRLQL------- 298
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
K N L + + +S + ++ + I E
Sbjct: 299 ------KQPNQPGNNPLGRVLAVYDKDKPRSV-----------EALELRLLETIVDEQTG 341
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-VVSIPGIIESLISILLGL 186
+ + LS L +++ ++G+LG V+GM+ FQ I + + + V GI +L++ +LGL
Sbjct: 342 LEKGLSMLKLLAALAPMLGLLGTVIGMIETFQVITQFGNGDPKVMASGISMALVTTVLGL 401
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
++P +A+N +++ +E A + Q
Sbjct: 402 VAAMPLLLAHNVLSGWAEEIRSILEKQGIGLVAQQAEQ 439
>gi|292670668|ref|ZP_06604094.1| conserved hypothetical protein [Selenomonas noxia ATCC 43541]
gi|292647695|gb|EFF65667.1| conserved hypothetical protein [Selenomonas noxia ATCC 43541]
Length = 207
Score = 92.2 bits (228), Expect = 5e-17, Method: Composition-based stats.
Identities = 38/204 (18%), Positives = 78/204 (38%), Gaps = 21/204 (10%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG---QS 68
S LF GL ++ L I S++++++ +++ + R+ R F + +
Sbjct: 6 SAVHLFHSGGL----VMYPLLILSLITFAIAVERFYYYRINRKGSRTFFHGVYHAAVQKD 61
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+T+ K K ++ I S + G + + ++ E
Sbjct: 62 WDTIGKLCKEFP-SAVSRIVESGIE------------NAGTETAMKGAFSDRMSMEAINF 108
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCV 188
L +L ++ + L+G+LG V GM+ F + ++ + E+L++ GLCV
Sbjct: 109 RRYLDYLSAIVTIAPLLGLLGTVTGMIQTFSVLDEGGGAGAITGG-VGEALVATATGLCV 167
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEG 212
+I + Y F E
Sbjct: 168 AIIAFCVYTYFSHQLDAVVTDTER 191
>gi|227329772|ref|ZP_03833796.1| putative biopolymer transport protein [Pectobacterium carotovorum
subsp. carotovorum WPP14]
Length = 222
Score = 92.2 bits (228), Expect = 5e-17, Method: Composition-based stats.
Identities = 28/191 (14%), Positives = 84/191 (43%), Gaps = 12/191 (6%)
Query: 18 MQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG-QSLETVCKSL 76
M + + I +++ +++ +II++S+ F RQ + E+ + + + + +L
Sbjct: 1 MNADMLHEIIFYVMYASLVIALMIIIERSLYFSYTHRQAKRLERALTADIRHIHDLPDAL 60
Query: 77 KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLG 136
++ +A + + +D ++ ++D + +++ L L
Sbjct: 61 TQRPSLPIAVVTPVLAQSHQAEN----------RDALNDLIDAQYLQSKPQLSRGLWVLE 110
Query: 137 SMSSAGLLVGILGAVLGMMGFFQSIAGYY-SNNVVSIPGIIESLISILLGLCVSIPSSIA 195
++ +A L+G+LG ++G++ F++++ S+ G+ +L + LG+ +++ +
Sbjct: 111 TVVTAAPLLGLLGTIMGIIETFKALSAAGISDPSQVSAGMGTALYATGLGIAIALVCLLG 170
Query: 196 YNKFIEDSKKF 206
N +
Sbjct: 171 NNFLQSRMEHI 181
>gi|218962006|ref|YP_001741781.1| hypothetical protein; putative membrane protein [Candidatus
Cloacamonas acidaminovorans]
gi|167730663|emb|CAO81575.1| hypothetical protein; putative membrane protein [Candidatus
Cloacamonas acidaminovorans]
Length = 261
Score = 92.2 bits (228), Expect = 5e-17, Method: Composition-based stats.
Identities = 28/200 (14%), Positives = 83/200 (41%), Gaps = 8/200 (4%)
Query: 29 TLLFIFSILSWSVIIQKSVNFI-TLRRQFREF---EQLFWSGQSLETVCKSLKNHHNIGL 84
+L +F ++ + + F + + L+ K +++ +
Sbjct: 59 AILLVF-VIGLVYAFVRWYQLYPKEKIDAAGFYLKLRNYIRNDQLDEATKIAESYKGTTM 117
Query: 85 AAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLL 144
IF SA+ +K + G ++ +++ + ++ A+ + + ++ L + +++
Sbjct: 118 GFIFWSALMVFKDARKSG-QTGADLRNSVQNSLEEAVLQTVYKLDSGLFWFDTLAQVATY 176
Query: 145 VGILGAVLGMMGFFQSIAG--YYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIED 202
+G+LG + G++ F +AG + GI +++ + LGL +IP ++ +
Sbjct: 177 LGLLGTIWGLLEAFAGLAGLTGAAQQTALTDGIKKAIGTTALGLLAAIPLTLIKGWLLTR 236
Query: 203 SKKFAMQMEGFANEFSAILS 222
+ ++ F+ + ++
Sbjct: 237 ANNIISNIDEFSVKLINTIN 256
>gi|146308885|ref|YP_001189350.1| MotA/TolQ/ExbB proton channel [Pseudomonas mendocina ymp]
gi|145577086|gb|ABP86618.1| outer membrane transport energization protein ExbB [Pseudomonas
mendocina ymp]
Length = 449
Score = 92.2 bits (228), Expect = 5e-17, Method: Composition-based stats.
Identities = 30/120 (25%), Positives = 59/120 (49%), Gaps = 1/120 (0%)
Query: 102 GARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI 161
GA+ + + ++ +D AI +E + + L +++ L+G+LG V GM+ FQ+I
Sbjct: 321 GAKPQLADLETLELKLDEAILQETPPLEKGQGLLKLLAAVAPLLGLLGTVTGMIVTFQAI 380
Query: 162 AGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAI 220
+ + GI ++L++ +LGL V+IP ++ SK +E + A+
Sbjct: 381 TQSGGGDSRLMADGISQALVTTVLGLVVAIPLLFLHSLLASRSKGLIQILEQQSAGLIAL 440
>gi|71278525|ref|YP_270633.1| MotA/TolQ/ExbB proton channel family protein [Colwellia
psychrerythraea 34H]
gi|71144265|gb|AAZ24738.1| MotA/TolQ/ExbB proton channel family protein [Colwellia
psychrerythraea 34H]
Length = 457
Score = 92.2 bits (228), Expect = 5e-17, Method: Composition-based stats.
Identities = 27/124 (21%), Positives = 62/124 (50%), Gaps = 1/124 (0%)
Query: 97 KSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMG 156
+ +P + ++ + +I RE+ +++++L+ + +S L+G+LG V GM+
Sbjct: 315 RVMQVKDNNPNLDTETLELKLSESILREVPKLSKRLTLIKIISVVAPLIGLLGTVTGMIN 374
Query: 157 FFQSIAGYYSNN-VVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFAN 215
FQ+I + + + + GI ++L++ +LGL V+IP + S+ ++ +
Sbjct: 375 TFQAITLFGTGDPKLMAGGISQALVTTVLGLVVAIPMVFIFAYLNGRSRNIVNILQQEST 434
Query: 216 EFSA 219
A
Sbjct: 435 GIIA 438
>gi|157368848|ref|YP_001476837.1| MotA/TolQ/ExbB proton channel [Serratia proteamaculans 568]
gi|157320612|gb|ABV39709.1| MotA/TolQ/ExbB proton channel [Serratia proteamaculans 568]
Length = 217
Score = 92.2 bits (228), Expect = 6e-17, Method: Composition-based stats.
Identities = 41/213 (19%), Positives = 87/213 (40%), Gaps = 12/213 (5%)
Query: 18 MQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLF-WSGQSLETVCKSL 76
M L I +++ ++ +II++++ F +RQ R EQ + + L
Sbjct: 2 MNANLMHDIIFYVMYAALAIALVIIIERALYFAYTQRQARRLEQALTLDVRRTADLPDEL 61
Query: 77 KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLG 136
+++ LA I S + G ++ I ++D + L L
Sbjct: 62 TQRNSLPLAVI----------SPVLEQKHRAGDREAIGDLIDAQYLLSKPLMARGLWLLE 111
Query: 137 SMSSAGLLVGILGAVLGMMGFFQSIAGYY-SNNVVSIPGIIESLISILLGLCVSIPSSIA 195
++ +A L+G+LG V+G++ F+++A S + G+ +L + LG+ +++ +
Sbjct: 112 TIVTAAPLLGLLGTVMGIIETFKALAASGVSEPSLVSAGMGTALYATGLGIAIALLCLVG 171
Query: 196 YNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
N ++ ++ A SR GN
Sbjct: 172 NNYLQSRMERINELLKVLLIRAGAPASRPENGN 204
>gi|331019435|gb|EGH99491.1| biopolymer transport protein ExbB [Pseudomonas syringae pv.
lachrymans str. M302278PT]
Length = 104
Score = 92.2 bits (228), Expect = 6e-17, Method: Composition-based stats.
Identities = 25/82 (30%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Query: 143 LLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIPSSIAYNKFIE 201
+G+ G V G+M QSI S ++ ++ G I +L++ +G+ V++P+ + YN F+
Sbjct: 1 PFIGLFGTVWGIMEALQSIGVTGSASLEAVAGPIGHALVATGVGIAVAVPAVLIYNFFLR 60
Query: 202 DSKKFAMQMEGFANEFSAILSR 223
K M+ FA++F A+ R
Sbjct: 61 RLKLAVADMDDFAHDFDALAQR 82
>gi|330752572|emb|CBL87518.1| MotA/TolQ/ExbB family biopolymer transport protein [uncultured
Flavobacteria bacterium]
Length = 224
Score = 92.2 bits (228), Expect = 6e-17, Method: Composition-based stats.
Identities = 33/191 (17%), Positives = 75/191 (39%), Gaps = 17/191 (8%)
Query: 40 SVIIQKSVNFITLRRQFREFEQLFWS---GQSLETVCKSLKNHHNIGLAAIFMSAMSEWK 96
+ ++ + + F S +E + L NI ++ + +S
Sbjct: 46 YIYFERIFAIRSAVKMTPTFMSQIRSFVIQGKVEEA-QKLCLKENIPVSRLVSKGLSRIG 104
Query: 97 KSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMG 156
+ + I+ ++ A E+ ++ + +S L +++ A ++G LG V+GM+
Sbjct: 105 RPL-----------EDINTAIENAGRLEVYQLEKNISILATIAGAAPMLGFLGTVIGMII 153
Query: 157 FFQSIAGYYSN--NVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFA 214
I+ N + G+ ++ + + GL V I ++YN + + ME +
Sbjct: 154 SIFEISNAGGNIDMQLLADGLYTAMTTTVAGLIVGIIGYVSYNHLVVKTNNAVYLMESTS 213
Query: 215 NEFSAILSRQT 225
EF +L+
Sbjct: 214 LEFLDLLNEPA 224
>gi|325276008|ref|ZP_08141830.1| MotA/TolQ/ExbB proton channel [Pseudomonas sp. TJI-51]
gi|324098860|gb|EGB96884.1| MotA/TolQ/ExbB proton channel [Pseudomonas sp. TJI-51]
Length = 211
Score = 92.2 bits (228), Expect = 6e-17, Method: Composition-based stats.
Identities = 42/222 (18%), Positives = 90/222 (40%), Gaps = 19/222 (8%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
++ L G + + + SI + +++I++ R W + +
Sbjct: 1 MWELVKSGGWM----MLPIILSSIAAMAIVIERLWTLRASRVTPPHLLGQVWIWIKDKQL 56
Query: 73 -CKSLKN-HHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
LK + L I + ++ + + + ++ A +R + E+
Sbjct: 57 TSDKLKALRADSPLGEILAAGLANSRHGR-----------EIMKECIEEAASRVIHELER 105
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYY--SNNVVSIPGIIESLISILLGLCV 188
+S LG++++ L+G+LG VLGM+ F + G +N V GI ++L++ GL V
Sbjct: 106 YISTLGTIAAMAPLLGLLGTVLGMIDIFSAFMGTQMTANAAVLAGGISKALVTTAAGLMV 165
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
IP+ + + + + ME A + +L E ++
Sbjct: 166 GIPAVFFHRFLLRRIDELVVGMEQEAIKLVEVLQGDREVEVA 207
>gi|196228133|ref|ZP_03127000.1| MotA/TolQ/ExbB proton channel [Chthoniobacter flavus Ellin428]
gi|196227536|gb|EDY22039.1| MotA/TolQ/ExbB proton channel [Chthoniobacter flavus Ellin428]
Length = 316
Score = 92.2 bits (228), Expect = 6e-17, Method: Composition-based stats.
Identities = 34/218 (15%), Positives = 86/218 (39%), Gaps = 20/218 (9%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLET 71
+++ L G ++ + S+++ ++ TLRR + L
Sbjct: 94 TLWKLIESGGW----VMVAIGFLSVVTVMLVFT---YLFTLRRGAILTPHYMNTADVL-- 144
Query: 72 VCKSLKNHHNIGLAAI----FMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
LK +GL AI + +++ D ++P + + + + A +
Sbjct: 145 ----LKKRDYLGLLAISSRHGEAVARVVQRTLDFATKNPTASYEVVREIAETEAASQAAS 200
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA---GYYSNNVVSIPGIIESLISILL 184
+ + +L + ++G+LG V+G++ F +A S +++ G+ ++L++
Sbjct: 201 LQHRTVYLADIGMLAPMIGLLGTVIGIISSFGDLAHKDASQSRDMLLAGGVSQALVATAS 260
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
GL + I + Y+ F + +E + +++
Sbjct: 261 GLVLGITAMFFYSLFRNRVQSLISDLEIASAHILGLIA 298
>gi|239995809|ref|ZP_04716333.1| biopolymer transport proteins-like [Alteromonas macleodii ATCC
27126]
Length = 458
Score = 91.8 bits (227), Expect = 6e-17, Method: Composition-based stats.
Identities = 38/207 (18%), Positives = 81/207 (39%), Gaps = 25/207 (12%)
Query: 15 ALFMQMGLAVKCIITLLFIFSILSWSVI-IQKSVNFITLRRQFREFEQLFWSGQSLETVC 73
+ + ++ L ++I + K + L + + SG++L +
Sbjct: 253 HVVKGGVWVIPIVLFALLA------TLIALFKVIQLWRLPK-----VKQVASGKALVNMV 301
Query: 74 KSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLS 133
+G F M K A +P D + + + ++ +
Sbjct: 302 ----GSSGVG----FFDGMQRELYDITKRASTPTERDDELFSALQQ----DKIKLEKYNG 349
Query: 134 FLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCVSIPS 192
+ ++ L+G+LG V GM+ F+ + + S++ I GI ++L++ LGL V+IP+
Sbjct: 350 TIAVTAAVAPLLGLLGTVSGMIETFRMMTAFGSSDPEVISGGIAKALVTTELGLVVAIPA 409
Query: 193 SIAYNKFIEDSKKFAMQMEGFANEFSA 219
I ++ + ++E FA S
Sbjct: 410 LILNAVLSRKARHYYEELESFALVLSN 436
>gi|189220336|ref|YP_001940976.1| biopolymer transport protein, MotA/TolQ/ExbB family
[Methylacidiphilum infernorum V4]
gi|189187194|gb|ACD84379.1| Biopolymer transport protein, MotA/TolQ/ExbB family
[Methylacidiphilum infernorum V4]
Length = 296
Score = 91.8 bits (227), Expect = 6e-17, Method: Composition-based stats.
Identities = 45/224 (20%), Positives = 89/224 (39%), Gaps = 19/224 (8%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQK--SVNFITLRRQFREFEQL--FW 64
M++S + + I+ L + +I++++ + ++ + + LRR+ ++ F
Sbjct: 1 MNMSFANIILNTFFRGGPIMWPLLLTAIIAFATVFERIFWWSMVQLRRKGSRLSEVYNFL 60
Query: 65 SGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARE 124
+E K L + + ++ + S + VA E
Sbjct: 61 KSGQIEEAVK-LAQASKDPVMKMIWWGLTHHETSLQN--------------ALQVAAGFE 105
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILL 184
L+E L+ L + + G L+G+LG V G+M F + V GI E+LI+
Sbjct: 106 LKEAGRGLAILDTTVTLGPLLGLLGTVTGIMNAFHFVGNEELAAVKVSGGIAEALIATAT 165
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
GL ++I + I +N F +E A+ +L + G
Sbjct: 166 GLALAIFALIPFNYFSRKVANLQFDLETAASNVELLLQSRNRGT 209
>gi|149177284|ref|ZP_01855889.1| probable TolQ-type transport protein [Planctomyces maris DSM 8797]
gi|148843809|gb|EDL58167.1| probable TolQ-type transport protein [Planctomyces maris DSM 8797]
Length = 284
Score = 91.8 bits (227), Expect = 6e-17, Method: Composition-based stats.
Identities = 36/201 (17%), Positives = 80/201 (39%), Gaps = 16/201 (7%)
Query: 29 TLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKN---HHNIGLA 85
++ + SI ++I++ ++ G + +S + + L+
Sbjct: 59 IIIAVLSIAMVALIVEHVISI-RSNALMPPGLAEEVHGLISQQQYRSADSVCKSNPSFLS 117
Query: 86 AIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLV 145
I + ++E + +++ M+ A ++ + K+ +L + + ++
Sbjct: 118 YILSAGLAEVQLGYGA-----------VEKAMEDAAMQQSARLNRKIEYLSVIGTLSPML 166
Query: 146 GILGAVLGMMGFFQSIAGYYSNNVV-SIPGIIESLISILLGLCVSIPSSIAYNKFIEDSK 204
G+LG V GM+ F + +V PGI ++LI+ L GL V++P+ ++ F
Sbjct: 167 GLLGTVWGMILAFSEFTAKANPDVAELAPGISKALITTLFGLSVTVPALASFAFFRNRID 226
Query: 205 KFAMQMEGFANEFSAILSRQT 225
+ Q A A R T
Sbjct: 227 ELVAQSSLLAEHVFADFKRST 247
>gi|323497732|ref|ZP_08102747.1| putative biopolymer transport protein exbb-related protein [Vibrio
sinaloensis DSM 21326]
gi|323317208|gb|EGA70204.1| putative biopolymer transport protein exbb-related protein [Vibrio
sinaloensis DSM 21326]
Length = 448
Score = 91.8 bits (227), Expect = 6e-17, Method: Composition-based stats.
Identities = 39/202 (19%), Positives = 81/202 (40%), Gaps = 33/202 (16%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLA 85
+ L + I + +++RQ + KS ++ L
Sbjct: 268 IVALFLVGM-----VIAIVRGGVVFSIQRQ-------------IAQQLKSPNQPNDNPLG 309
Query: 86 AIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLV 145
+ ++ R+P ++ R+ + I E + + LS L +++ ++
Sbjct: 310 RVLSV-------LEEQPNRTPEALELRLLEV----ILDEQSHLEKGLSMLKLLAALAPML 358
Query: 146 GILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSK 204
G+LG V GM+ FQ I + + V GI +L++ ++GL ++P +A+N ++
Sbjct: 359 GLLGTVTGMIETFQVITLFGGGDAKVMAGGISTALVTTVMGLVAAMPLLLAHNLLSTQAE 418
Query: 205 KFAMQMEGFANEFSAILSRQTE 226
K +E AI++ Q E
Sbjct: 419 KLRNILEKQGV---AIVAEQAE 437
>gi|291277164|ref|YP_003516936.1| ExbB/TolQ family transport protein [Helicobacter mustelae 12198]
gi|290964358|emb|CBG40208.1| putative exbB/tolQ family transport protein [Helicobacter mustelae
12198]
Length = 154
Score = 91.8 bits (227), Expect = 6e-17, Method: Composition-based stats.
Identities = 26/89 (29%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV-SIPGIIESLISILLGL 186
+ +L+ + ++ S VG+LG V G+M F I+G N+ + G+ +L + +GL
Sbjct: 49 LHRRLTLIATIGSNAPYVGLLGTVAGIMLTFIGISGSSVNDTSEIMKGLALALKATAMGL 108
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFAN 215
V+IPS + YN + S+ A + E + +
Sbjct: 109 IVAIPSVVFYNMLVRKSEIIATKWEIYHH 137
>gi|254486924|ref|ZP_05100129.1| MotA/TolQ/ExbB proton channel [Roseobacter sp. GAI101]
gi|214043793|gb|EEB84431.1| MotA/TolQ/ExbB proton channel [Roseobacter sp. GAI101]
Length = 194
Score = 91.8 bits (227), Expect = 6e-17, Method: Composition-based stats.
Identities = 45/190 (23%), Positives = 87/190 (45%), Gaps = 22/190 (11%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAI 87
+ + + S+L ++++ K + + R + +GQS GL A
Sbjct: 16 LWAIAVLSVLVLAIVLWKLWRLMLIGAWSRSGAEALLAGQS----------GAPKGLRAR 65
Query: 88 FMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGI 147
F++ + ++ D AR + +M +A AR L ++ L L + + L+G+
Sbjct: 66 FVAEVFAARRLPDALAR---------EEVMRIA-ARVLSQLRSGLRPLELIVTIAPLIGL 115
Query: 148 LGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKK 205
LG VLGM+ FQ++ G ++ V GI E+L++ G+ V+IP+++A + F +
Sbjct: 116 LGTVLGMIEAFQALETTGGQADPSVLAGGIWEALLTTAAGMGVAIPAAVALSWFEAIADT 175
Query: 206 FAMQMEGFAN 215
+E A
Sbjct: 176 VQGDLEDIAT 185
>gi|78047808|ref|YP_363983.1| biopolymer transport ExbB protein [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|78036238|emb|CAJ23929.1| biopolymer transport ExbB protein [Xanthomonas campestris pv.
vesicatoria str. 85-10]
Length = 183
Score = 91.8 bits (227), Expect = 6e-17, Method: Composition-based stats.
Identities = 28/113 (24%), Positives = 57/113 (50%), Gaps = 1/113 (0%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
+D I ++ + + L+ LG+++SAG L+G+LG V+GM+ F I + +V
Sbjct: 48 RDMIRERIEDTGRHVVHRMERYLNALGTIASAGPLLGLLGTVVGMIQMFLGILDHGVGDV 107
Query: 170 -VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
GI ++L+ G+ +++P+ +A+ F + ++ME A +
Sbjct: 108 NQLAGGIGKALVCTATGMIIAVPALMAHRFFKGRIAGYIIEMEQEATLLLDTI 160
>gi|227113639|ref|ZP_03827295.1| putative biopolymer transport protein [Pectobacterium carotovorum
subsp. brasiliensis PBR1692]
Length = 227
Score = 91.8 bits (227), Expect = 6e-17, Method: Composition-based stats.
Identities = 29/191 (15%), Positives = 85/191 (44%), Gaps = 12/191 (6%)
Query: 18 MQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG-QSLETVCKSL 76
M + + I +++ +++ +II++S+ F RRQ + E+ + + + + +L
Sbjct: 1 MNADMLHEIIFYVMYASLVIALMIIIERSLYFSYTRRQAKRLERALTADIRHVHDLPGAL 60
Query: 77 KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLG 136
++ +A + + +D ++ ++D + +++ L L
Sbjct: 61 TQRPSLPIAVVTPVLAQSHQAEN----------RDALNDLIDAQYLQSKPQLSRGLWILE 110
Query: 137 SMSSAGLLVGILGAVLGMMGFFQSIAGYY-SNNVVSIPGIIESLISILLGLCVSIPSSIA 195
++ +A L+G+LG ++G++ F++++ S+ G+ +L + LG+ +++ +
Sbjct: 111 TVVTAAPLLGLLGTIMGIIETFKALSAAGISDPSQVSAGMGTALYATGLGIAIALVCLLG 170
Query: 196 YNKFIEDSKKF 206
N +
Sbjct: 171 NNFLQSRMEHI 181
>gi|291286884|ref|YP_003503700.1| MotA/TolQ/ExbB proton channel [Denitrovibrio acetiphilus DSM 12809]
gi|290884044|gb|ADD67744.1| MotA/TolQ/ExbB proton channel [Denitrovibrio acetiphilus DSM 12809]
Length = 447
Score = 91.8 bits (227), Expect = 7e-17, Method: Composition-based stats.
Identities = 34/147 (23%), Positives = 67/147 (45%), Gaps = 12/147 (8%)
Query: 82 IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSA 141
L +F + MS A P ++ I ++ A+ E + LSFL ++
Sbjct: 312 TPLGRVFNAVMS--------SAGKPRNVRSDI---LEQALISESSVLERNLSFLSVAAAV 360
Query: 142 GLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFI 200
++G++G V GM+ F +I Y S++ + GI E+L + +LGL +IP +A F
Sbjct: 361 SPMLGLMGTVTGMISTFHAITVYGSSDPRMMAGGISEALTTTMLGLTAAIPIMLAVTIFN 420
Query: 201 EDSKKFAMQMEGFANEFSAILSRQTEG 227
++ +++ A + + + +
Sbjct: 421 RRTENLTDRLQECAVKVFNNMEQGDDA 447
>gi|149908164|ref|ZP_01896828.1| putative biopolymer transport proteinExbB-related protein
[Moritella sp. PE36]
gi|149808706|gb|EDM68639.1| putative biopolymer transport proteinExbB-related protein
[Moritella sp. PE36]
Length = 495
Score = 91.8 bits (227), Expect = 7e-17, Method: Composition-based stats.
Identities = 43/205 (20%), Positives = 83/205 (40%), Gaps = 30/205 (14%)
Query: 19 QMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKN 78
G I++LL ++ + I + + + RRQ + + L N
Sbjct: 293 NGGTVGYVIMSLL----VVGLLIAIVQGMKLVITRRQIK----------------QQLAN 332
Query: 79 HH---NIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFL 135
+ L I + KS + + + R+M+V I + + + + LS L
Sbjct: 333 PSHIGDNPLGRILQVYVDSNIKSALHNSTEALEL-----RLMEVVIDEQ-QGLEKGLSML 386
Query: 136 GSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-VVSIPGIIESLISILLGLCVSIPSSI 194
+++ ++G+LG V GM+ FQ I + + + V GI +LI+ +LGL ++P +
Sbjct: 387 KLLAALAPMLGLLGTVTGMIETFQVITQFGNGDPKVMAGGISMALITTVLGLVAAMPLLL 446
Query: 195 AYNKFIEDSKKFAMQMEGFANEFSA 219
A+N + +E A
Sbjct: 447 AHNILSTQADNIRDILEKQGISLVA 471
>gi|56461218|ref|YP_156499.1| TonB system biopolymer transport component [Idiomarina loihiensis
L2TR]
gi|56180228|gb|AAV82950.1| TonB system biopolymer transport component [Idiomarina loihiensis
L2TR]
Length = 459
Score = 91.8 bits (227), Expect = 7e-17, Method: Composition-based stats.
Identities = 34/122 (27%), Positives = 64/122 (52%), Gaps = 1/122 (0%)
Query: 106 PIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYY 165
P + ++ + I RE+ +IT L+F+ +S L+G+LG V GM+ FQ+I +
Sbjct: 338 PQADTETLELKLSEGILREVPKITRNLTFIKIISVVAPLMGLLGTVTGMINTFQAITLFG 397
Query: 166 SNN-VVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+ + + GI ++L++ +LGL V+IP ++ + SK ++ A+ A S +
Sbjct: 398 TGDPKLMAGGISQALVTTVLGLVVAIPMTLLFATLHTRSKNLIHILQEQASGIIAERSER 457
Query: 225 TE 226
E
Sbjct: 458 GE 459
>gi|332883681|gb|EGK03961.1| hypothetical protein HMPREF9456_00989 [Dysgonomonas mossii DSM
22836]
Length = 273
Score = 91.8 bits (227), Expect = 7e-17, Method: Composition-based stats.
Identities = 44/211 (20%), Positives = 88/211 (41%), Gaps = 14/211 (6%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITL--RRQFREF---EQLFWSG 66
S+ ALF Q G + +ITLL LS +++ + +F +
Sbjct: 55 SLGALF-QGGWVIPIVITLLLTTLTLS----VERFFALNRASGKGSTAKFVMNAKAKLEA 109
Query: 67 QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
+ L + +A I + + + ++ I + ++ A EL
Sbjct: 110 GDIA-GATKLCDEQKGSVANILKAGLIRYADVEKIADKNNDEKAAMIQKELEEATTLELP 168
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISILLG 185
+ + LS + ++S+ G L+G+ G VLGM+ F ++ + + ++ GI E+L + +G
Sbjct: 169 YLQQNLSVIATISTLGTLMGLFGTVLGMIRSFGAMGQEGAPDSTALAVGISEALYNTAMG 228
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQME--GFA 214
+ S I+Y+ F + ++ GFA
Sbjct: 229 IGTGAASIISYSYFSGKVEDITNAVDEVGFA 259
>gi|166712275|ref|ZP_02243482.1| biopolymer transport protein [Xanthomonas oryzae pv. oryzicola
BLS256]
Length = 220
Score = 91.8 bits (227), Expect = 7e-17, Method: Composition-based stats.
Identities = 27/111 (24%), Positives = 56/111 (50%), Gaps = 1/111 (0%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
++ I ++ + + L+ LG+++SAG L+G+LG V+GM+ F I + +V
Sbjct: 85 RELIRERIEDTGRHVVHRMERYLNALGTIASAGPLLGLLGTVVGMIQMFLGILDHGVGDV 144
Query: 170 -VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
GI ++L+ G+ +++P+ +A+ F + ++ME A
Sbjct: 145 NQLAGGIGKALVCTATGMIIAVPALMAHRFFKGRIAGYIIEMEQEATLLLD 195
>gi|294674580|ref|YP_003575196.1| MotA/TolQ/ExbB proton channel family protein [Prevotella ruminicola
23]
gi|294474063|gb|ADE83452.1| MotA/TolQ/ExbB proton channel family protein [Prevotella ruminicola
23]
Length = 276
Score = 91.8 bits (227), Expect = 7e-17, Method: Composition-based stats.
Identities = 43/217 (19%), Positives = 88/217 (40%), Gaps = 17/217 (7%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVI---IQKSVNFITL--RRQFREFEQLFW-- 64
++ + G V I+TLLF +VI I++ T + +F
Sbjct: 59 NLLGTVYKGGFVVGLILTLLF-------TVICLGIERFFAIKTASGKINLAKFTAQVKEL 111
Query: 65 -SGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAR 123
Q + L + ++ + ++++ +K +I + + A
Sbjct: 112 IKAQKFDEA-DKLCDKMQGSVSNVVKASIAAYKDVEGNDTLKKAAKVAKIQQAHEEATQL 170
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI-AGYYSNNVVSIPGIIESLISI 182
E+ + L + ++ S G L + G VLGM+G FQ++ AG ++++ GI E+L++
Sbjct: 171 EMPTLQMNLPMVATIVSLGTLTALFGTVLGMIGSFQALSAGGGADSMALSAGISEALVNT 230
Query: 183 LLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
G+ S +++ YN F K ++ +A
Sbjct: 231 ASGILTSWVATVVYNFFSNKIDKLTYALDEIGYTIAA 267
>gi|291287516|ref|YP_003504332.1| MotA/TolQ/ExbB proton channel [Denitrovibrio acetiphilus DSM 12809]
gi|290884676|gb|ADD68376.1| MotA/TolQ/ExbB proton channel [Denitrovibrio acetiphilus DSM 12809]
Length = 198
Score = 91.8 bits (227), Expect = 7e-17, Method: Composition-based stats.
Identities = 42/216 (19%), Positives = 87/216 (40%), Gaps = 29/216 (13%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQL---FWSGQS 68
+ F G+ ++ L I S+ W +I K+ F+ +R+ FE+ F +G
Sbjct: 8 NTIQHFQSGGI----VMPALLISSLFMWLLIFMKAFQFVQIRKSEVSFEECMEGFRAGTH 63
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ + K+ +IF+S +RM++ ++ I
Sbjct: 64 VGAAWQ--KDVMQFARESIFLSG-------------------KYRNRMLNSYLSTVTSGI 102
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
++ ++ + ++SA L G+ G V GM+ F I+ Y + N GI +L++ GL
Sbjct: 103 SQHVNTVLILASAAPLFGLFGTVSGMIDTFNVISYYGTGNPRAMASGISVALVTTQAGLV 162
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
V++P + + + ++ F + L +
Sbjct: 163 VAVPGLVMGSFLRRRASVTQDRIHLFGHMLIKELEK 198
>gi|298372202|ref|ZP_06982192.1| MotA/TolQ/ExbB proton channel family protein [Bacteroidetes oral
taxon 274 str. F0058]
gi|298275106|gb|EFI16657.1| MotA/TolQ/ExbB proton channel family protein [Bacteroidetes oral
taxon 274 str. F0058]
Length = 233
Score = 91.8 bits (227), Expect = 7e-17, Method: Composition-based stats.
Identities = 34/183 (18%), Positives = 72/183 (39%), Gaps = 10/183 (5%)
Query: 40 SVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSC 99
VII++ V TL + W + + V + + +S+ + + K
Sbjct: 54 YVIIERIVVLNTLGKS-----DSVWFSRIKDLVYE----YKFESAEKFCLSSSNAYSKVI 104
Query: 100 DKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQ 159
G + + M +++ + +++LG +S ++G LG + G++ F
Sbjct: 105 AAGLSQVNNDMEAVQGAMQSEANQQVASMERHMNWLGITASVAPMLGFLGTIFGVITIFF 164
Query: 160 SIAGYYSNNVVSIP-GIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFS 218
IA + +I G+ + +I +GL V I + Y K M+ ++N+
Sbjct: 165 RIAQTNEFEIATISDGLYQKMICSGVGLFVGILAYAGYYLLNGRIDKIVANMDKYSNDLV 224
Query: 219 AIL 221
+L
Sbjct: 225 NML 227
>gi|256819107|ref|YP_003140386.1| MotA/TolQ/ExbB proton channel [Capnocytophaga ochracea DSM 7271]
gi|256580690|gb|ACU91825.1| MotA/TolQ/ExbB proton channel [Capnocytophaga ochracea DSM 7271]
Length = 243
Score = 91.8 bits (227), Expect = 7e-17, Method: Composition-based stats.
Identities = 33/197 (16%), Positives = 78/197 (39%), Gaps = 14/197 (7%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE--TVCKSLKNHHNIGLA 85
+ + + I+ +V I++ + ++ + K + + +A
Sbjct: 52 MAPILLCLIIGLAVAIERIIYLNMATTNSKKLIADIEEALDSKGIEAAKEVCRNTKGPVA 111
Query: 86 AIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLV 145
+IF + RS GI D +++ + ++ ++ + +S++ + ++
Sbjct: 112 SIFYQGLD----------RSSEGI-DMVEKSVVSYGGVQMGQLEKNVSWISLFIAIAPML 160
Query: 146 GILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIPSSIAYNKFIEDSK 204
G +G V+GM+ F I+ + I G I +L++ + GL V++ + YN I
Sbjct: 161 GFMGTVIGMIEAFDKISSAGGLDASLIAGDIKVALLTTVFGLIVAMILQVFYNYIIAKID 220
Query: 205 KFAMQMEGFANEFSAIL 221
ME + +L
Sbjct: 221 AIVNDMEDASISLIDLL 237
>gi|225011426|ref|ZP_03701864.1| MotA/TolQ/ExbB proton channel [Flavobacteria bacterium MS024-2A]
gi|225003929|gb|EEG41901.1| MotA/TolQ/ExbB proton channel [Flavobacteria bacterium MS024-2A]
Length = 225
Score = 91.8 bits (227), Expect = 7e-17, Method: Composition-based stats.
Identities = 35/192 (18%), Positives = 75/192 (39%), Gaps = 19/192 (9%)
Query: 40 SVIIQKSVNFITLRRQFREFEQLFW----SGQSLETVCKSLKNHHNIGLAAIFMSAMSEW 95
+ ++ + + F +G+ + L N ++ + +S
Sbjct: 47 YIYFERLFAIRSAVKISPNFMPQIRTYVMNGKI--DGAQQLCITENAPVSRLVSKGLSRI 104
Query: 96 KKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMM 155
+ + I+ ++ A E+ ++ + +S L ++S A ++G LG V+GM+
Sbjct: 105 GRPL-----------EDINTAIENAGRLEVYQLEKNISILATISGAAPMLGFLGTVIGMI 153
Query: 156 GFFQSIAGYYSN--NVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGF 213
I+ N + G+ ++ + + GL V I I YN + + K QME
Sbjct: 154 LSIFEISNAGGNIDMQLLADGLYTAMTTTVAGLIVGILGYITYNHLVVKTNKAVYQMEAS 213
Query: 214 ANEFSAILSRQT 225
+ EF +L+
Sbjct: 214 SLEFLDLLNEPA 225
>gi|284040769|ref|YP_003390699.1| MotA/TolQ/ExbB proton channel [Spirosoma linguale DSM 74]
gi|283820062|gb|ADB41900.1| MotA/TolQ/ExbB proton channel [Spirosoma linguale DSM 74]
Length = 236
Score = 91.8 bits (227), Expect = 7e-17, Method: Composition-based stats.
Identities = 41/218 (18%), Positives = 86/218 (39%), Gaps = 18/218 (8%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS--GQS 68
+ +F L + G + I LLF +I ++ + R F Q
Sbjct: 27 LQLFDLVAKGGWVMIPIAFLLFSA----LYLIFERYFVIRSQSRYDANFIDNIRDMVAQG 82
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+S + + +F A+ R I++ I+ ++ EL +
Sbjct: 83 NIKSAESFAKNQRTAMGRVFEKAI----------GRIGSPIRE-IEGTIETVGQIELSRL 131
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
+ +LG ++ ++G +G + G++ F I+ + +V + G+ E +I+ GL
Sbjct: 132 ERNMGYLGIIAGIAPMLGFIGTISGIIRIFYDISLSDNISVGIIAGGLYEKMITSGSGLI 191
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
V + + Y+ ++F + +E A EF +L + T
Sbjct: 192 VGVIAYTGYHLLNMMIERFTLALEVNAFEFIEVLQKPT 229
>gi|325953951|ref|YP_004237611.1| MotA/TolQ/ExbB proton channel [Weeksella virosa DSM 16922]
gi|323436569|gb|ADX67033.1| MotA/TolQ/ExbB proton channel [Weeksella virosa DSM 16922]
Length = 272
Score = 91.8 bits (227), Expect = 7e-17, Method: Composition-based stats.
Identities = 32/209 (15%), Positives = 92/209 (44%), Gaps = 10/209 (4%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQ--FREFEQLFWSG 66
++ + + G + ++T F F ++ +S+ +++ +F +
Sbjct: 54 HPLNFLGIIRKGGHIIPFLMT--FFFMVIVFSI--DRAIVLGKANGSGSVDKFVNDIRAL 109
Query: 67 QSLETVCKSLK--NHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARE 124
+ + K+++ + + + ++ +K + + ++++ ++ A E
Sbjct: 110 LNKNEINKAIELCDKQKGSVGNVVKEGLTTYKALQNDNTMNKEQKLVQLNKTLEEATVLE 169
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA-GYYSNNVVSIP-GIIESLISI 182
+ + + ++ L +++S G L+ ++G V+GM+ F ++ G S + + GI E+LI+
Sbjct: 170 MPTLEKNMTVLSTVASIGTLIALMGTVIGMIKAFFALGEGGGSPDAAQLSVGIAEALINT 229
Query: 183 LLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
+G+ S + IAY F +++
Sbjct: 230 GMGIGASAFAIIAYAYFTSKIDDLTFKID 258
>gi|192362143|ref|YP_001980995.1| MotA/TolQ/ExbB proton channel family protein [Cellvibrio japonicus
Ueda107]
gi|190688308|gb|ACE85986.1| MotA/TolQ/ExbB proton channel family protein [Cellvibrio japonicus
Ueda107]
Length = 460
Score = 91.8 bits (227), Expect = 7e-17, Method: Composition-based stats.
Identities = 26/117 (22%), Positives = 56/117 (47%), Gaps = 1/117 (0%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ ++ ++ A+ +E I L+ L +++ L+G+LG V GM+ FQ+I + + +
Sbjct: 342 ETLELKLEEAVLKERPAIESGLAILKIIAAVAPLLGLLGTVTGMIETFQAITIFGAGDPK 401
Query: 171 -SIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
GI +L++ + GL V+IP + + +K ++ A S ++
Sbjct: 402 NMAGGISAALVTTVQGLVVAIPVVLMHTLVNTRAKAVIQVLDEQTTGIIAENSERSH 458
>gi|320530157|ref|ZP_08031227.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Selenomonas artemidis F0399]
gi|320137590|gb|EFW29502.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Selenomonas artemidis F0399]
Length = 211
Score = 91.8 bits (227), Expect = 8e-17, Method: Composition-based stats.
Identities = 38/192 (19%), Positives = 70/192 (36%), Gaps = 10/192 (5%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAI 87
+ LL + S+ ++ I + + + + R E V KSL+ LA
Sbjct: 17 MYLLLLCSLTVAAIAIDRFMLYRRASQGARALE---------AEVSKSLRGRKVNELA-P 66
Query: 88 FMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGI 147
+ A + + +D A + +L++L + + L+G+
Sbjct: 67 AAEGQDNMVAYLVRTALDARAAGEDVPMALDAAYGEAAMLLRARLNYLSMIVTMAPLMGL 126
Query: 148 LGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFA 207
LG + GM+ F + GI E+LI+ GL V+I S + + F +
Sbjct: 127 LGTISGMIESFSIFNLQAGQPMAITGGIGEALIATATGLLVAIFSLVVHTYFAQRMDVML 186
Query: 208 MQMEGFANEFSA 219
+E N A
Sbjct: 187 TLLEKTMNTLQA 198
>gi|327479358|gb|AEA82668.1| TonB system biopolymer transport component [Pseudomonas stutzeri
DSM 4166]
Length = 448
Score = 91.4 bits (226), Expect = 8e-17, Method: Composition-based stats.
Identities = 29/120 (24%), Positives = 57/120 (47%), Gaps = 1/120 (0%)
Query: 102 GARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI 161
G + + + ++ +D AI +E + L +++ L+G+LG V GM+ FQ+I
Sbjct: 320 GPKPQLSDLETLELKLDEAILQETPPLERGQPLLKLLAAVAPLLGLLGTVTGMIITFQAI 379
Query: 162 AGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAI 220
+ + GI ++L++ +LGL V+IP ++ SK +E + A+
Sbjct: 380 TQSGGGDSRLMADGISQALVTTVLGLVVAIPLLFLHSLLASRSKALIQLLEQQSAGLIAL 439
>gi|310818267|ref|YP_003950625.1| MotA/TolQ/ExbB proton channel family protein [Stigmatella
aurantiaca DW4/3-1]
gi|309391339|gb|ADO68798.1| MotA/TolQ/ExbB proton channel family protein [Stigmatella
aurantiaca DW4/3-1]
Length = 246
Score = 91.4 bits (226), Expect = 8e-17, Method: Composition-based stats.
Identities = 30/200 (15%), Positives = 82/200 (41%), Gaps = 17/200 (8%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQFRE-FEQLFWS---GQSLETVCKSLKNHHNIG 83
+ + + I++ S+++++S+ +E F + L+ +
Sbjct: 37 MYPIAVCGIIAVSIVVERSIVLFFKSSINKEGFLRGLKKHIYAGDLDKAINYVAGQKPTP 96
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
L ++ + + + Q+ + +D A RE ++ + +L + +A +
Sbjct: 97 LTSVIKAGL-----------MNVPKGQEEVQAALDEASLRETPKLEVRTGYLAMLGNAAM 145
Query: 144 LVGILGAVLGMMGFFQSIAGYYSNNVVS--IPGIIESLISILLGLCVSIPSSIAYNKFIE 201
L G+LG V G++ F+++A + + GI E++ GL +IP+ +A++ +
Sbjct: 146 LAGLLGTVSGLISCFEAVANVNPADKATILANGISEAMNCTGFGLLTAIPALVAFSVLMG 205
Query: 202 DSKKFAMQMEGFANEFSAIL 221
++ + + ++
Sbjct: 206 RTQTLINDINETSVSVLNLI 225
>gi|77460398|ref|YP_349905.1| MotA/TolQ/ExbB proton channel [Pseudomonas fluorescens Pf0-1]
gi|77384401|gb|ABA75914.1| putative biopolymer transport protein [Pseudomonas fluorescens
Pf0-1]
Length = 211
Score = 91.4 bits (226), Expect = 8e-17, Method: Composition-based stats.
Identities = 43/224 (19%), Positives = 90/224 (40%), Gaps = 23/224 (10%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFW---SGQSL 69
++ L G + + + SI + +++ ++ R W + L
Sbjct: 1 MWELVKSGGWM----MLPIILSSIAAMAIVAERLWTLRASRVTPEHLLGQVWVWIKDKQL 56
Query: 70 ETVCKSLKN-HHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ LK N L I + ++ K + + ++ A AR + E+
Sbjct: 57 NK--EKLKELRANSPLGEILAAGLANSKHGR-----------EIMKECIEEAAARVIHEL 103
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYY--SNNVVSIPGIIESLISILLGL 186
++ LG++++ L+G+LG VLGM+ F + G +N V GI ++LI+ GL
Sbjct: 104 ERYVNALGTIAAMSPLLGLLGTVLGMIDIFSAFTGAGMTTNASVLAGGISKALITTAAGL 163
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
V IP+ + + + ME A + ++ + +++
Sbjct: 164 MVGIPAVFFHRFLQRRIDELVVGMEQEAIKLVEVVQGDRDVDLA 207
>gi|86140775|ref|ZP_01059334.1| MotA/TolQ/ExbB proton channel family protein [Leeuwenhoekiella
blandensis MED217]
gi|85832717|gb|EAQ51166.1| MotA/TolQ/ExbB proton channel family protein [Leeuwenhoekiella
blandensis MED217]
Length = 263
Score = 91.4 bits (226), Expect = 8e-17, Method: Composition-based stats.
Identities = 33/201 (16%), Positives = 76/201 (37%), Gaps = 18/201 (8%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITL----RRQFREFEQLFWSGQSLETVCKSLKNHHNIG 83
+ ++ + IL ++ I++ + + ++ E SG K + +
Sbjct: 73 MGIVLLCLILGLAIAIERIIYLNLATTNTSKLAQDVEDALNSGGI--EAAKEVCRNTRGP 130
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
+A+I+ + + D ++ + ++ + + +S++ +
Sbjct: 131 VASIYYQGLDRVDEGV-----------DAAEKAVVAYGGVQMGLLEKNVSWVSLFIALAP 179
Query: 144 LVGILGAVLGMMGFFQSIAGYYS-NNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIED 202
++G +G V+GM+ F I + GI +L++ + GL V+I I YN I
Sbjct: 180 MLGFMGTVIGMIQAFDKIEAAGDMQPSLVAGGIKVALLTTVFGLIVAIILQIFYNYIIAK 239
Query: 203 SKKFAMQMEGFANEFSAILSR 223
ME + +L R
Sbjct: 240 IDSIVNDMEDASITLIDMLVR 260
>gi|146281205|ref|YP_001171358.1| TonB system biopolymer transport component [Pseudomonas stutzeri
A1501]
gi|145569410|gb|ABP78516.1| TonB system biopolymer transport component [Pseudomonas stutzeri
A1501]
Length = 448
Score = 91.4 bits (226), Expect = 8e-17, Method: Composition-based stats.
Identities = 29/120 (24%), Positives = 57/120 (47%), Gaps = 1/120 (0%)
Query: 102 GARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI 161
G + + + ++ +D AI +E + L +++ L+G+LG V GM+ FQ+I
Sbjct: 320 GPKPQLSDLETLELKLDEAILQETPPLERGQPLLKLLAAVAPLLGLLGTVTGMIITFQAI 379
Query: 162 AGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAI 220
+ + GI ++L++ +LGL V+IP ++ SK +E + A+
Sbjct: 380 TQSGGGDSRLMADGISQALVTTVLGLVVAIPLLFLHSLLASRSKALIQLLEQQSAGLIAL 439
>gi|56460958|ref|YP_156239.1| TonB system biopolymer transport component [Idiomarina loihiensis
L2TR]
gi|56179968|gb|AAV82690.1| TonB system biopolymer transport component [Idiomarina loihiensis
L2TR]
Length = 455
Score = 91.4 bits (226), Expect = 9e-17, Method: Composition-based stats.
Identities = 28/110 (25%), Positives = 57/110 (51%), Gaps = 1/110 (0%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ ++ +D AI RE + ++ + +++ L+G+LG V+GM+G FQSI + + +
Sbjct: 340 ENLELKLDEAILRETPRVESGINVIKILAAIAPLLGLLGTVVGMIGTFQSITLFGTGDPK 399
Query: 171 SIPG-IIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
+ G I +L++ +GL +IP +A++ K ++ A A
Sbjct: 400 IMAGDISMALVTTAMGLIAAIPLILAHSIVASRGKSIVHILDEQAAGIVA 449
>gi|261414455|ref|YP_003248138.1| MotA/TolQ/ExbB proton channel [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|261370911|gb|ACX73656.1| MotA/TolQ/ExbB proton channel [Fibrobacter succinogenes subsp.
succinogenes S85]
Length = 210
Score = 91.4 bits (226), Expect = 9e-17, Method: Composition-based stats.
Identities = 40/208 (19%), Positives = 83/208 (39%), Gaps = 21/208 (10%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRR-QFREF 59
M+ Y + +SI ++ G ++ LF+ L W ++ ++ + L+ +F
Sbjct: 1 MDEYSVIEATMSIL---LRGGW----VLLPLFLIGWLGWFLMFERYGYYFMLKGTSTSKF 53
Query: 60 EQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDV 119
+ + E L+ F++ + +K + G + + M
Sbjct: 54 FKDLDTVGE-EAAFAKLRKRRFG----YFLALVENVRKYRNDGPVA-------VRNAMLA 101
Query: 120 AIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYY-SNNVVSIPGIIES 178
+++ L + + +S L+G+LG V GM+ F++I + N V+ GI E+
Sbjct: 102 TRHELDVSLSKSLKTIVTCASIAPLLGLLGTVSGMVHTFETIKQFGFGNPVLLADGISEA 161
Query: 179 LISILLGLCVSIPSSIAYNKFIEDSKKF 206
L++ GL V+ P + YN
Sbjct: 162 LLTTQAGLLVAFPLMLVYNYLESRVDSI 189
>gi|110681313|ref|YP_684320.1| MotA/TolQ/ExbB proton channel family protein [Roseobacter
denitrificans OCh 114]
gi|109457429|gb|ABG33634.1| MotA/TolQ/ExbB proton channel family domain protein [Roseobacter
denitrificans OCh 114]
Length = 224
Score = 91.4 bits (226), Expect = 9e-17, Method: Composition-based stats.
Identities = 36/196 (18%), Positives = 76/196 (38%), Gaps = 17/196 (8%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLET 71
S++ +F G V LL SI++ +V + K R + +
Sbjct: 11 SVWGIFDLGGPVV----MLLLCLSIVALAVTLYKVWQHRVAR---------VGRHDHIRS 57
Query: 72 VCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEK 131
+ ++ ++ S + ++P ++ + A L +
Sbjct: 58 ALRQRDANNPAAALTEVRASTSHLAPLIEAALKAPGDAI--VNDRLVKEAAANLSRLEGG 115
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGLCVS 189
L S++ L+G+ G VLGM+ F+++ AG + + GI +L++ +GL V+
Sbjct: 116 YRILDSIAQISPLLGLFGTVLGMIDAFRALQEAGAAVDPSLLAGGIWVALLTTAVGLAVA 175
Query: 190 IPSSIAYNKFIEDSKK 205
IP+S+ + +
Sbjct: 176 IPTSLVLTWLEGRTSR 191
>gi|117621306|ref|YP_858668.1| TonB system biopolymer transport component [Aeromonas hydrophila
subsp. hydrophila ATCC 7966]
gi|117562713|gb|ABK39661.1| TonB system biopolymer transport component [Aeromonas hydrophila
subsp. hydrophila ATCC 7966]
Length = 435
Score = 91.4 bits (226), Expect = 9e-17, Method: Composition-based stats.
Identities = 41/208 (19%), Positives = 84/208 (40%), Gaps = 36/208 (17%)
Query: 22 LAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHN 81
+ V L I + WS+ S +RRQ + E H +
Sbjct: 255 IIVLLAAIGLGIAGVRLWSL----SRELGRVRRQLKSGE-----------------YHAD 293
Query: 82 IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSA 141
L + A + P + ++ +D AI +E + + + +++
Sbjct: 294 NALGRVLTVA-----------DKHPELSMETLELRLDEAILQETPRMERGIGMVKVIAAI 342
Query: 142 GLLVGILGAVLGMMGFFQSIAGYYSNN-VVSIPGIIESLISILLGLCVSIPSSIAYNKFI 200
++G+LG V GM+G FQ+I + + + + GI +L++ + GL +IP +A++
Sbjct: 343 APMLGLLGTVTGMIGTFQAITQFGTGDPKIMAGGISMALVTTVQGLVAAIPLILAHSLLQ 402
Query: 201 EDSKKFAMQMEGFANEFSAILSRQTEGN 228
+ + +E + + IL+ + E N
Sbjct: 403 SRFTELSNVLEQ---QVAGILAERAESN 427
>gi|196228022|ref|ZP_03126889.1| MotA/TolQ/ExbB proton channel [Chthoniobacter flavus Ellin428]
gi|196227425|gb|EDY21928.1| MotA/TolQ/ExbB proton channel [Chthoniobacter flavus Ellin428]
Length = 304
Score = 91.4 bits (226), Expect = 9e-17, Method: Composition-based stats.
Identities = 39/211 (18%), Positives = 85/211 (40%), Gaps = 16/211 (7%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS---GQS 68
S+F + G + I + S+ + IIQ + + +
Sbjct: 42 SVFETIKEGGPLIMLIWCAIIGTSVTMVTFIIQNIMQLRKAKLAPPPLIAALQQTILAGN 101
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ ++ + N LA + S ++ + ++ ++ + RE +
Sbjct: 102 YQEAWETCNANRNY-LANVLKSGLTRIGRG-----------KEAVEDAVAEHGLREATML 149
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLC 187
+ S+L + ++G+LG V+GMMG F+ +AG ++ ++ G I E L++ GL
Sbjct: 150 RTRNSYLSVIGVVSPMIGLLGTVIGMMGAFRVLAGSGISDPRALSGKIGEVLLATASGLF 209
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFS 218
++IP+ ++Y F S+ + + N
Sbjct: 210 IAIPAFVSYYVFRNISQMCIVHADDVVNSLL 240
>gi|333031520|ref|ZP_08459581.1| MotA/TolQ/ExbB proton channel [Bacteroides coprosuis DSM 18011]
gi|332742117|gb|EGJ72599.1| MotA/TolQ/ExbB proton channel [Bacteroides coprosuis DSM 18011]
Length = 257
Score = 91.4 bits (226), Expect = 9e-17, Method: Composition-based stats.
Identities = 34/179 (18%), Positives = 76/179 (42%), Gaps = 7/179 (3%)
Query: 43 IQKSVNFITLRRQFREFEQLFWSGQSLETV----CKSLKNHHNIGLAAIFMSAMSEWKKS 98
+++ + + + + + + LE + L + +A I + + ++
Sbjct: 65 VERLFAMSRASGKGKVAQFVINANKKLEEGDIEGVEKLCDEQKGSVANILKAGLVRYRDV 124
Query: 99 CDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFF 158
+ + I + +D A EL + + L+ + ++SS G L G+ G VLGM+ F
Sbjct: 125 ESIDDLTNVEKAGLIQKEIDEATTLELPYLEKNLNIIAAISSLGTLFGLFGTVLGMIRSF 184
Query: 159 QSIAGYYSNNVVSIP-GIIESLISILLGLCVSIPSSIAYNKFIEDSKKF--AMQMEGFA 214
++ + + ++ GI E+L++ +G+ + I Y F + A+ GFA
Sbjct: 185 AAMGNEGAPDSTALAVGISEALMNTAMGIGTGAVAIITYTYFSGRVQSITDAVDEVGFA 243
>gi|312131933|ref|YP_003999273.1| mota/tolq/exbb proton channel [Leadbetterella byssophila DSM 17132]
gi|311908479|gb|ADQ18920.1| MotA/TolQ/ExbB proton channel [Leadbetterella byssophila DSM 17132]
Length = 224
Score = 91.4 bits (226), Expect = 9e-17, Method: Composition-based stats.
Identities = 38/224 (16%), Positives = 90/224 (40%), Gaps = 20/224 (8%)
Query: 7 AIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG 66
A ++I+ F+L ++ G V I+ LL I + + ++ + + F +
Sbjct: 17 APVEINYFSLLLKGGFVVYPILVLLLI----TIYLGFERYFFIKSASQMDSGFIRSLKDN 72
Query: 67 ---QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAR 123
+ +L N ++ I ++ K I+ M++
Sbjct: 73 LVRGDI-RAASALAKGTNKPISRILEKGINRIGKPVKD-----------IESAMEIQSNL 120
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISI 182
E+ ++ + + +LG ++ +G +G + G++ F I+ + + +I G+ E +I+
Sbjct: 121 EVSKMEKNMGYLGLIAGVAPTLGFVGTISGIIRIFYEISTTGNFTIETISNGLYEKMIAS 180
Query: 183 LLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
GL V + + Y+ KF++ ++ +F L+ T
Sbjct: 181 FTGLIVGLIAYALYHGINMMIDKFSIHLQSTVMDFFDTLNEPTR 224
>gi|325110932|ref|YP_004272000.1| MotA/TolQ/ExbB proton channel [Planctomyces brasiliensis DSM 5305]
gi|324971200|gb|ADY61978.1| MotA/TolQ/ExbB proton channel [Planctomyces brasiliensis DSM 5305]
Length = 238
Score = 91.4 bits (226), Expect = 1e-16, Method: Composition-based stats.
Identities = 42/206 (20%), Positives = 80/206 (38%), Gaps = 19/206 (9%)
Query: 18 MQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLR---RQFREFEQLFWSGQSLETVCK 74
++ G V +I L S++ ++I+Q+ + R E S
Sbjct: 28 LEAGGYVGYVIVAL---SVVMVTLIMQQLFSLRRGNLMPRWLAEQAHQLISTGRFSEA-N 83
Query: 75 SLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSF 134
L H L + + +SE + + + + ++ A A + K+ +
Sbjct: 84 ELCKKHPCFLGDMIQAGLSETEMGYLQ-----------VQKALEDASAEHSARMMRKVEY 132
Query: 135 LGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV-SIPGIIESLISILLGLCVSIPSS 193
L + + ++G+LG V GM+ F S +V PGI +LI+ L+GL V+IP+
Sbjct: 133 LNVIGTIAPMLGLLGTVWGMIQAFLEFESQASPSVSEFAPGISHALITTLMGLSVAIPAL 192
Query: 194 IAYNKFIEDSKKFAMQMEGFANEFSA 219
A+ + + A + A
Sbjct: 193 GAFAILRNRVDELVSETSLLAEQVFA 218
>gi|270263806|ref|ZP_06192074.1| MotA/TolQ/ExbB proton channel [Serratia odorifera 4Rx13]
gi|270041999|gb|EFA15095.1| MotA/TolQ/ExbB proton channel [Serratia odorifera 4Rx13]
Length = 216
Score = 91.4 bits (226), Expect = 1e-16, Method: Composition-based stats.
Identities = 35/191 (18%), Positives = 79/191 (41%), Gaps = 12/191 (6%)
Query: 18 MQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFW-SGQSLETVCKSL 76
M L I +++ ++ +II++++ F +RQ R EQ + L
Sbjct: 1 MNANLLHDIIFYVMYAALAIALVIIIERALYFAYTQRQARRLEQALTPDVHRAADLPDEL 60
Query: 77 KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLG 136
+++ LA I + + G ++ I ++D + L L
Sbjct: 61 TQRNSLPLAVIAPVLEQKHR----------AGDREAIGDLVDAQYLLSKPLMARGLWLLE 110
Query: 137 SMSSAGLLVGILGAVLGMMGFFQSIAGYY-SNNVVSIPGIIESLISILLGLCVSIPSSIA 195
++ +A L+G+LG V+G++ F+++A S + G+ +L + LG+ +++ +
Sbjct: 111 TIVTAAPLLGLLGTVMGIIETFKALAASGVSEPSLVSAGMGTALYATGLGIAIALLCLVG 170
Query: 196 YNKFIEDSKKF 206
N ++
Sbjct: 171 NNYLQSRMERI 181
>gi|187919305|ref|YP_001888336.1| MotA/TolQ/ExbB proton channel [Burkholderia phytofirmans PsJN]
gi|187717743|gb|ACD18966.1| MotA/TolQ/ExbB proton channel [Burkholderia phytofirmans PsJN]
Length = 215
Score = 91.4 bits (226), Expect = 1e-16, Method: Composition-based stats.
Identities = 26/106 (24%), Positives = 55/106 (51%), Gaps = 2/106 (1%)
Query: 112 RIDRMMDVAIARELEE-ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ ++A ++E +++ L ++ +A L+G+LG ++GMM FQ G +
Sbjct: 93 WLREANAQSVASQIERDMSKGFWVLETIVTAAPLLGLLGTIVGMMHSFQLFGGTGLVDPA 152
Query: 171 -SIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFAN 215
G+ +SL++ +GL V++ + A+N F ++ ++E FA
Sbjct: 153 GVTGGVAQSLVATAIGLVVALFALFAFNYFSRRLERLMDELESFAT 198
>gi|50119868|ref|YP_049035.1| putative biopolymer transport protein [Pectobacterium atrosepticum
SCRI1043]
gi|49610394|emb|CAG73838.1| putative biopolymer transport protein [Pectobacterium atrosepticum
SCRI1043]
Length = 222
Score = 91.4 bits (226), Expect = 1e-16, Method: Composition-based stats.
Identities = 27/191 (14%), Positives = 84/191 (43%), Gaps = 12/191 (6%)
Query: 18 MQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG-QSLETVCKSL 76
M + + I +++ +++ +II++S+ F RRQ + ++ + + + + +L
Sbjct: 1 MNADMLHEIIFYVMYASLVIALMIIIERSLYFSYTRRQAKRLDRALTADIRHVHDLPDAL 60
Query: 77 KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLG 136
++ + + + +D ++ ++D + +++ L L
Sbjct: 61 TQRPSLPITVVTPVLAQSHQAEN----------RDALNDLIDAQYLQSKPQLSRGLWILE 110
Query: 137 SMSSAGLLVGILGAVLGMMGFFQSIAGYY-SNNVVSIPGIIESLISILLGLCVSIPSSIA 195
++ +A L+G+LG ++G++ F++++ S+ G+ +L + LG+ +++ +
Sbjct: 111 TVVTAAPLLGLLGTIMGIIDTFKALSAAGISDPSQVSAGMGTALYATGLGIAIALVCLLG 170
Query: 196 YNKFIEDSKKF 206
N +
Sbjct: 171 NNFLQSRMEHI 181
>gi|225011194|ref|ZP_03701654.1| MotA/TolQ/ExbB proton channel [Flavobacteria bacterium MS024-3C]
gi|225004655|gb|EEG42617.1| MotA/TolQ/ExbB proton channel [Flavobacteria bacterium MS024-3C]
Length = 242
Score = 91.0 bits (225), Expect = 1e-16, Method: Composition-based stats.
Identities = 38/199 (19%), Positives = 77/199 (38%), Gaps = 18/199 (9%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLR----RQFREFEQLFWSGQSLETVCKSLKNHHNIG 83
+ ++ + IL +V I++ + + E SG K L
Sbjct: 52 MGIVLLCLILGLAVAIERIIFLNLATTNTTKLKEAVEAALKSGGV--NAAKELCRDTKGP 109
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
+A+IF + +S + ++ + ++ ++ + +S+L +
Sbjct: 110 VASIFYQGLDRAGESV-----------ESAEKAVVAYGGVQMGQLEKNVSWLSLFIAIAP 158
Query: 144 LVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIPSSIAYNKFIED 202
++G +G V+GM+ FQ IA + + I G I +L++ + GL +I I YN I
Sbjct: 159 MLGFMGTVIGMIQAFQKIAAVGNLSASLIAGDIQVALLTTVFGLITAIILQIFYNYIIAK 218
Query: 203 SKKFAMQMEGFANEFSAIL 221
ME + +L
Sbjct: 219 IDGIVNDMEDSSIALIDML 237
>gi|162451265|ref|YP_001613632.1| adventurous gliding motility protein R [Sorangium cellulosum 'So ce
56']
gi|161161847|emb|CAN93152.1| adventurous gliding motility protein R [Sorangium cellulosum 'So ce
56']
Length = 225
Score = 91.0 bits (225), Expect = 1e-16, Method: Composition-based stats.
Identities = 34/199 (17%), Positives = 82/199 (41%), Gaps = 20/199 (10%)
Query: 32 FIFSILSWSVIIQK-SVNFITLRRQFREF---EQLFWSGQSLETVCKSLKNHHNIGLAAI 87
+ S + ++II++ + R +EF + + +++ K L + + + +
Sbjct: 32 LVVSAVVVTIIIERTAFQLGRYRVNSKEFFAQVKKLVAAGNIDRAIK-LCDASDYPILQL 90
Query: 88 FMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGI 147
+ ++ K D+ ID + ++ + +++ L S+++ L+G+
Sbjct: 91 VKAGLTHANKGADE-----------IDAALSEKLSELKPAVEKRIGALWSLANIATLIGL 139
Query: 148 LGAVLGMMGFFQSIAGYYSNNV----VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDS 203
+G V G++ F SIA + + GI E++ + GL +++ IA+ S
Sbjct: 140 IGTVSGLINTFASIAAQGLSQADKQRMLSNGIAEAMYNTAFGLAIAVVCMIAHVLLHTRS 199
Query: 204 KKFAMQMEGFANEFSAILS 222
K +E +L+
Sbjct: 200 KNIQHDLESTTERVFNLLT 218
>gi|315224528|ref|ZP_07866355.1| MotA/TolQ/ExbB proton channel family protein [Capnocytophaga
ochracea F0287]
gi|314945549|gb|EFS97571.1| MotA/TolQ/ExbB proton channel family protein [Capnocytophaga
ochracea F0287]
Length = 243
Score = 91.0 bits (225), Expect = 1e-16, Method: Composition-based stats.
Identities = 33/197 (16%), Positives = 78/197 (39%), Gaps = 14/197 (7%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE--TVCKSLKNHHNIGLA 85
+ + + I+ +V I++ + ++ + K + + +A
Sbjct: 52 MAPILLCLIIGLAVAIERIIYLNMATTNSKKLIADIEEALDSKGIEAAKEVCRNTKGPVA 111
Query: 86 AIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLV 145
+IF + RS GI D +++ + ++ ++ + +S++ + ++
Sbjct: 112 SIFYQGLD----------RSSEGI-DMVEKSVVSYGGVQMGQLEKNVSWISLFIAIAPML 160
Query: 146 GILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIPSSIAYNKFIEDSK 204
G +G V+GM+ F I+ + I G I +L++ + GL V++ + YN I
Sbjct: 161 GFMGTVIGMIEAFDKISSAGGLDASLIAGDIKVALLTTVFGLIVAMILQVFYNYIIAKID 220
Query: 205 KFAMQMEGFANEFSAIL 221
ME + +L
Sbjct: 221 AIVNDMEDASISLIDLL 237
>gi|294624866|ref|ZP_06703523.1| biopolymer transport ExbB protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|292600825|gb|EFF44905.1| biopolymer transport ExbB protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
Length = 183
Score = 91.0 bits (225), Expect = 1e-16, Method: Composition-based stats.
Identities = 28/111 (25%), Positives = 56/111 (50%), Gaps = 1/111 (0%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
+D I ++ + + L+ LG+++SAG L+G+LG V+GM+ F I + +V
Sbjct: 48 RDVIRERIEDTGRHVVHRMERYLNALGTIASAGPLLGLLGTVVGMIQMFMGILDHGVGDV 107
Query: 170 -VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
GI ++L+ G+ +++P+ +A+ F + ++ME A
Sbjct: 108 NQLAGGIGKALVCTATGMIIAVPALMAHRFFKGRIAGYIVEMEQEAILLLD 158
>gi|301167607|emb|CBW27190.1| putative transport-related protein [Bacteriovorax marinus SJ]
Length = 172
Score = 91.0 bits (225), Expect = 1e-16, Method: Composition-based stats.
Identities = 38/202 (18%), Positives = 80/202 (39%), Gaps = 39/202 (19%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+ + Q G+ I+ +L +I+ ++++I K ++
Sbjct: 1 MRVIDYIEQGGV----IMYILLALNIIGFAIMISKFFILTKESKRS-------------S 43
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
V L + + K D I Q+ ++ + + +
Sbjct: 44 QVANELSDR------------VKTVTKDSDTNTIIEIAKQE---------LSNHIAGLEK 82
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVS-IPGIIESLISILLGLCVS 189
L+ + ++S L+G+LG V+G++ F+ ++ NN S GI +LI+ + G+ V+
Sbjct: 83 GLNTVKIIASISPLLGLLGTVIGVLVAFKVMSQTGLNNPASFAQGISMALITTVGGMIVA 142
Query: 190 IPSSIAYNKFIEDSKKFAMQME 211
IP I +N I +F ++E
Sbjct: 143 IPHYIGHNYLIGMVDQFETRLE 164
>gi|254281980|ref|ZP_04956948.1| MotA/TolQ/ExbB proton channel [gamma proteobacterium NOR51-B]
gi|219678183|gb|EED34532.1| MotA/TolQ/ExbB proton channel [gamma proteobacterium NOR51-B]
Length = 196
Score = 91.0 bits (225), Expect = 1e-16, Method: Composition-based stats.
Identities = 37/195 (18%), Positives = 76/195 (38%), Gaps = 16/195 (8%)
Query: 32 FIFSILSWSVIIQKSVNFITLRRQFREFEQLFW---SGQSLETVCKSLKNHHNIGLAAIF 88
+ SI++ S+ I++ R W L+ + + L I
Sbjct: 5 ILCSIIALSICIERYFALNPRRIAPPHLLATVWRQLQNGELD-GMRLKQLRQGSPLGTIL 63
Query: 89 MSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGIL 148
+ ++ + D + + A + + ++ + L+ LG++++ L+G+L
Sbjct: 64 AAGLANRSQGR-----------DVMKESIQEAASHVVHDLEKFLNALGTVAAVSPLLGLL 112
Query: 149 GAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFA 207
G VLGM+ F I + N GI E+LI+ GL V+IP+ + + +
Sbjct: 113 GTVLGMIRVFTEITVQGTGNANALAGGISEALITTATGLAVAIPALVMHRFYTARIDTIV 172
Query: 208 MQMEGFANEFSAILS 222
+ +E + L
Sbjct: 173 VGLEQETIKLVDALH 187
>gi|251771954|gb|EES52526.1| MotA/TolQ/ExbB proton channel [Leptospirillum ferrodiazotrophum]
Length = 242
Score = 91.0 bits (225), Expect = 1e-16, Method: Composition-based stats.
Identities = 34/220 (15%), Positives = 85/220 (38%), Gaps = 17/220 (7%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG--QS 68
++ + M G ++ +L S+++ SV ++ + + +
Sbjct: 1 MNALSYLMSGGP----VMYILLPMSVVAISVGFERLFVLRQEKIHTERVLAVLRQNVKEK 56
Query: 69 LE-TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
L+ ++ I + I + + +S +G + ++ +++ E ++
Sbjct: 57 LDPKAVLAMVKESYISDSFIVNKILKLFVESELEG--------ENLEYLIEAEAVLEEKK 108
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSN-NVVSIPGIIESLISILLGL 186
+ E++ L + + L+G+LG ++G++ F ++ G+ E+LI+ GL
Sbjct: 109 LKERMWILDTAITMAPLLGLLGTIIGIVASFHVMSVSGLGKPTQITGGVAEALIATATGL 168
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
++I S YN + +E A IL +
Sbjct: 169 VIAIVSLGFYNFLYKWITGIKSSLES-AARLITILHKPIR 207
>gi|317487214|ref|ZP_07946013.1| MotA/TolQ/ExbB proton channel family protein [Bilophila wadsworthia
3_1_6]
gi|316921533|gb|EFV42820.1| MotA/TolQ/ExbB proton channel family protein [Bilophila wadsworthia
3_1_6]
Length = 252
Score = 91.0 bits (225), Expect = 1e-16, Method: Composition-based stats.
Identities = 38/186 (20%), Positives = 82/186 (44%), Gaps = 16/186 (8%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAI 87
+ L S+ + ++++++++ F+ F + V ++++ LAA
Sbjct: 6 MWPLLAVSVAALAIVVERALVFMGC---------PFPDSRFPGLVLEAMRTGDVRPLAAR 56
Query: 88 FMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGI 147
+ S D A + +R + + +A LE + +LS L ++ L+G+
Sbjct: 57 LEAVPS----LRDFAALLGSPLPNR-EAALRLAGETVLERLEARLSLLSVLARLAPLMGL 111
Query: 148 LGAVLGMMGFFQSIAG--YYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKK 205
LG +LGM+ F IA + + GI ++L++ GLC++IP+ + F ++
Sbjct: 112 LGTILGMITTFSRIAEARSGVDMSLLAGGIWQALLTTAAGLCIAIPALFFLSCFQGKVRR 171
Query: 206 FAMQME 211
A +
Sbjct: 172 VADALN 177
>gi|90415504|ref|ZP_01223438.1| MotA/TolQ/ExbB proton channel family protein [marine gamma
proteobacterium HTCC2207]
gi|90332827|gb|EAS47997.1| MotA/TolQ/ExbB proton channel family protein [marine gamma
proteobacterium HTCC2207]
Length = 456
Score = 91.0 bits (225), Expect = 1e-16, Method: Composition-based stats.
Identities = 28/110 (25%), Positives = 55/110 (50%), Gaps = 1/110 (0%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-V 169
+ ++ + A+ +E I LS L ++ L+G+LG V GM+ FQ I + + +
Sbjct: 341 ESLELKLHEAVLKERPAIESGLSLLKIIAMVAPLLGLLGTVTGMIITFQMITLFGAGDPK 400
Query: 170 VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
GI ++LI+ +LGL V+IP+ + + +++ +E + A
Sbjct: 401 AMAGGISQALITTVLGLVVAIPTVLMHTLVNGKAQRVLHILEEQSAGIVA 450
>gi|198283324|ref|YP_002219645.1| MotA/TolQ/ExbB proton channel [Acidithiobacillus ferrooxidans ATCC
53993]
gi|218667595|ref|YP_002425913.1| MotA/TolQ/ExbB proton channel family protein [Acidithiobacillus
ferrooxidans ATCC 23270]
gi|198247845|gb|ACH83438.1| MotA/TolQ/ExbB proton channel [Acidithiobacillus ferrooxidans ATCC
53993]
gi|218519808|gb|ACK80394.1| MotA/TolQ/ExbB proton channel family protein [Acidithiobacillus
ferrooxidans ATCC 23270]
Length = 217
Score = 91.0 bits (225), Expect = 1e-16, Method: Composition-based stats.
Identities = 31/181 (17%), Positives = 68/181 (37%), Gaps = 13/181 (7%)
Query: 44 QKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGA 103
++ +RR+ + + + E++ L + A+F + ++ S D +
Sbjct: 31 ERGWALAMIRRKGDDLLRDLQDRKGRESLETELAKTPSCPQQAVFAAVLA----SHDLAS 86
Query: 104 RSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAG 163
+ A+ + + L L + + L+G+LG ++GM FQ +
Sbjct: 87 GEAYA---------EEAMLTQATLLDRGLWILDTAVTLAPLLGLLGTIIGMFNAFQILGN 137
Query: 164 YYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
+ + E+L++ GL ++I + +N + + QME L R
Sbjct: 138 PDTAPTAITGHVAEALVATATGLAIAIVGLVLFNGLQQRVRLVLHQMERIKVSTLNRLYR 197
Query: 224 Q 224
Q
Sbjct: 198 Q 198
>gi|26988628|ref|NP_744053.1| MotA/TolQ/ExbB proton channel [Pseudomonas putida KT2440]
gi|24983408|gb|AAN67517.1|AE016380_5 MotA/TolQ/ExbB proton channel family protein [Pseudomonas putida
KT2440]
gi|313499949|gb|ADR61315.1| MotA/TolQ/ExbB proton channel [Pseudomonas putida BIRD-1]
Length = 224
Score = 91.0 bits (225), Expect = 1e-16, Method: Composition-based stats.
Identities = 40/222 (18%), Positives = 90/222 (40%), Gaps = 19/222 (8%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
++ L G + + + SI + ++++++ R W + +
Sbjct: 14 VWELVKSGGWM----MLPIILSSIAAMAIVVERLWTLRASRVTPPHLLGQVWMWIKDKQL 69
Query: 73 -CKSLKN-HHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
LK + L I + ++ + + + ++ A +R + E+
Sbjct: 70 TSDKLKALRADSPLGEILAAGLANSRHGR-----------EIMKECIEEAASRVIHELER 118
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYY--SNNVVSIPGIIESLISILLGLCV 188
+S LG++++ L+G+LG VLGM+ F + G +N V GI ++L++ GL V
Sbjct: 119 YISTLGTIAAMAPLLGLLGTVLGMIDIFSAFMGSQMTANAAVLASGISKALVTTAAGLMV 178
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
IP+ + + + + ME A + ++ E ++
Sbjct: 179 GIPAVFFHRFLLRRIDELVIGMEQEAIKLVEVIQGDREVEVA 220
>gi|269798399|ref|YP_003312299.1| MotA/TolQ/ExbB proton channel [Veillonella parvula DSM 2008]
gi|282850636|ref|ZP_06260015.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Veillonella parvula ATCC 17745]
gi|294792267|ref|ZP_06757415.1| biopolymer transport ExbB like protein [Veillonella sp. 6_1_27]
gi|294794129|ref|ZP_06759266.1| biopolymer transport ExbB like protein [Veillonella sp. 3_1_44]
gi|269095028|gb|ACZ25019.1| MotA/TolQ/ExbB proton channel [Veillonella parvula DSM 2008]
gi|282580129|gb|EFB85533.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Veillonella parvula ATCC 17745]
gi|294455699|gb|EFG24071.1| biopolymer transport ExbB like protein [Veillonella sp. 3_1_44]
gi|294457497|gb|EFG25859.1| biopolymer transport ExbB like protein [Veillonella sp. 6_1_27]
Length = 205
Score = 91.0 bits (225), Expect = 1e-16, Method: Composition-based stats.
Identities = 37/203 (18%), Positives = 77/203 (37%), Gaps = 21/203 (10%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQF---REFEQLFWSGQSL 69
+ LF G ++ L + S + ++ +++ + + F Q
Sbjct: 7 VIHLFHSGGY----VMYPLLLLSFMVIAIAAERAFFYRKYAGKTFVVTHAVNEFAKLQRW 62
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+ + K +K + +I + I + + ++ + + +
Sbjct: 63 DEIDKVIKENPSIA-SRIAEAGLK------------NDSSEEAMKTAFADQMGVDAVGFR 109
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVS 189
+ + +L + + L+G+LG V GM+G F SI + G+ E+LI+ GLCV+
Sbjct: 110 KYMDYLSATVTISPLLGLLGTVTGMIGSF-SILDSGAGASAITGGVGEALIATASGLCVA 168
Query: 190 IPSSIAYNKFIEDSKKFAMQMEG 212
I + I Y F Q+E
Sbjct: 169 IMAFIVYTIFSHRLDSIINQIEN 191
>gi|182412067|ref|YP_001817133.1| MotA/TolQ/ExbB proton channel [Opitutus terrae PB90-1]
gi|177839281|gb|ACB73533.1| MotA/TolQ/ExbB proton channel [Opitutus terrae PB90-1]
Length = 218
Score = 91.0 bits (225), Expect = 1e-16, Method: Composition-based stats.
Identities = 39/224 (17%), Positives = 92/224 (41%), Gaps = 20/224 (8%)
Query: 6 LAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS 65
++ +D+S LF Q G + +L + +++ + +++ + + + F +
Sbjct: 1 MSALDLS---LFAQGGPM----MWVLLVIALIGLVLFVERVLFLHRGQIRSTAFINGIKN 53
Query: 66 GQSLETVCKSLK--NHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAR 123
+ + ++L +AA+ +A+ + D + + A
Sbjct: 54 ILAKRRLVEALTVCEETPGPVAAVVKAALLHADEDADT-----------MRFYVQEAAVV 102
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISIL 183
EL + ++ + +++ LVG+LG VLGM+ F Y+ V G+ ++L++
Sbjct: 103 ELPALERRVGAIAAIAQVAPLVGLLGTVLGMVTTFTGFQKDYATASVLAAGMWQALLATA 162
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEG 227
L ++IP+ +A++ + +E NE L + G
Sbjct: 163 ASLMLAIPAHLAHHFLTGRIRAIVRDVEWAGNEIMRYLLTEYRG 206
>gi|320334859|ref|YP_004171570.1| MotA/TolQ/ExbB proton channel [Deinococcus maricopensis DSM 21211]
gi|319756148|gb|ADV67905.1| MotA/TolQ/ExbB proton channel [Deinococcus maricopensis DSM 21211]
Length = 222
Score = 91.0 bits (225), Expect = 1e-16, Method: Composition-based stats.
Identities = 43/214 (20%), Positives = 79/214 (36%), Gaps = 14/214 (6%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
++ L G + +L S+ + + ++ L R LE
Sbjct: 1 MNALTLIQAAGPL----LWILAALSLYVVYLAVLRAQLLTRLGRDPSATLAR-THAVLLE 55
Query: 71 TV-CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+L G A ++ + D+G + M+ A+ E +
Sbjct: 56 RGPHAALAELDRTGEATPAVNVLRAGLTRADRGVGAAQA-------AMNDAVLAEDARLY 108
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYS-NNVVSIPGIIESLISILLGLCV 188
L+ LG+++ L+G+LG V GM+ F + + GI E+L++ GL V
Sbjct: 109 AGLTALGTVAQIAPLLGLLGTVFGMVRSFLVFSQTTAPTPTQLATGISEALVNTAGGLIV 168
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
+I + +A N + + A+ E F A LS
Sbjct: 169 AILAYVARNALRARADRIAVSAERVREVFPAWLS 202
>gi|145301146|ref|YP_001143987.1| TonB system biopolymer transport component [Aeromonas salmonicida
subsp. salmonicida A449]
gi|142853918|gb|ABO92239.1| TonB system biopolymer transport component [Aeromonas salmonicida
subsp. salmonicida A449]
Length = 431
Score = 90.6 bits (224), Expect = 1e-16, Method: Composition-based stats.
Identities = 43/208 (20%), Positives = 86/208 (41%), Gaps = 36/208 (17%)
Query: 22 LAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHN 81
+ V L I ++ WS+ S I +RRQ + E H +
Sbjct: 251 IIVLLAAIGLGIAAVRLWSL----SRELILVRRQLKSGE-----------------YHAD 289
Query: 82 IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSA 141
L + A + P + ++ +D AI +E + + + +++
Sbjct: 290 NALGRVLTVA-----------EQHPELSMETLELRLDEAILQETPRMERGIGMVKVIAAI 338
Query: 142 GLLVGILGAVLGMMGFFQSIAGYYSNN-VVSIPGIIESLISILLGLCVSIPSSIAYNKFI 200
++G+LG V GM+G FQ+I + + + + GI +LI+ + GL +IP +A++
Sbjct: 339 APMLGLLGTVTGMIGTFQAITQFGTGDPKIMAGGISMALITTVQGLVAAIPLILAHSLLQ 398
Query: 201 EDSKKFAMQMEGFANEFSAILSRQTEGN 228
+ + +E + + IL+ + E N
Sbjct: 399 SRFTELSNVLEQ---QVAGILAERAESN 423
>gi|213586368|ref|ZP_03368194.1| biopolymer transport protein ExbB [Salmonella enterica subsp.
enterica serovar Typhi str. E98-0664]
Length = 82
Score = 90.6 bits (224), Expect = 1e-16, Method: Composition-based stats.
Identities = 17/75 (22%), Positives = 37/75 (49%)
Query: 6 LAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS 65
L D+S++ ++ + VKC++ L + S+++W++ KSV F T +R+ + +
Sbjct: 7 LMQTDLSVWGMYQHADIVVKCVMIGLILASVVTWAIFFSKSVEFFTQKRRLKREQLQLAD 66
Query: 66 GQSLETVCKSLKNHH 80
+SL+
Sbjct: 67 ARSLDQASDIAAGFS 81
>gi|152998085|ref|YP_001342920.1| MotA/TolQ/ExbB proton channel [Marinomonas sp. MWYL1]
gi|150839009|gb|ABR72985.1| MotA/TolQ/ExbB proton channel [Marinomonas sp. MWYL1]
Length = 236
Score = 90.6 bits (224), Expect = 1e-16, Method: Composition-based stats.
Identities = 40/199 (20%), Positives = 86/199 (43%), Gaps = 16/199 (8%)
Query: 27 IITLLFIFSILSWSVIIQKSVNFITLRRQFRE----FEQLFWSGQSLETVCKSLKNHHNI 82
++ +L +FSI++ ++++ K F +LR + + + S ++ E + L
Sbjct: 29 VVWILMVFSIVALTIVLLKLWQFSSLRAESLKTSNLALDKWRSEENGEKALEILDEKR-- 86
Query: 83 GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAG 142
+ A+ M + + D I ++ +L ++ L L +++
Sbjct: 87 PIDALVGYTMRALLAANTQA--------DLIREEVERRAMNQLNQLRSYLRPLEIIATLS 138
Query: 143 LLVGILGAVLGMMGFFQSIAGYYS--NNVVSIPGIIESLISILLGLCVSIPSSIAYNKFI 200
L+G+LG VLGM+ FQ + G + + V GI ++L++ +GL V+IP ++
Sbjct: 139 PLLGLLGTVLGMITAFQQMEGAGNQVDPSVLSGGIWQALLTTAVGLAVAIPVVTLHSWLE 198
Query: 201 EDSKKFAMQMEGFANEFSA 219
++ A M +
Sbjct: 199 RKVERVAHNMNDAVTQVFT 217
>gi|149907622|ref|ZP_01896369.1| MotA/TolQ/ExbB proton channel family protein [Moritella sp. PE36]
gi|149809292|gb|EDM69221.1| MotA/TolQ/ExbB proton channel family protein [Moritella sp. PE36]
Length = 480
Score = 90.6 bits (224), Expect = 1e-16, Method: Composition-based stats.
Identities = 33/134 (24%), Positives = 61/134 (45%), Gaps = 3/134 (2%)
Query: 97 KSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMG 156
+ R D + R +D AI EL E + L + +++ ++G+LG V GM+
Sbjct: 328 RIIGVADRHENSNADELARFLDEAILAELPECRKGLGSIAVLATIAPMLGLLGTVAGMIE 387
Query: 157 FFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFAN 215
FQ+I Y +++ V GI ++L++ GL ++P + ++ S +E +
Sbjct: 388 TFQAITAYGNSDPQVLSSGISKALLTTKFGLIAAVPLMLLHSLLTSKSDSIVHVIEHQSA 447
Query: 216 EFSAILSRQTEGNI 229
A RQ N+
Sbjct: 448 GLLA--QRQQRLNL 459
>gi|294665029|ref|ZP_06730336.1| biopolymer transport ExbB protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
gi|292605186|gb|EFF48530.1| biopolymer transport ExbB protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
Length = 183
Score = 90.6 bits (224), Expect = 1e-16, Method: Composition-based stats.
Identities = 28/111 (25%), Positives = 56/111 (50%), Gaps = 1/111 (0%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
+D I ++ + + L+ LG+++SAG L+G+LG V+GM+ F I + +V
Sbjct: 48 RDVIRERIEDTGRHVVHRMERYLNALGTIASAGPLLGLLGTVVGMIQMFMGILDHGVGDV 107
Query: 170 -VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
GI ++L+ G+ +++P+ +A+ F + ++ME A
Sbjct: 108 NQLAGGIGKALVCTATGMIIAVPALMAHRFFEGRIAGYIVEMEQEAILLLD 158
>gi|195952777|ref|YP_002121067.1| MotA/TolQ/ExbB proton channel [Hydrogenobaculum sp. Y04AAS1]
gi|195932389|gb|ACG57089.1| MotA/TolQ/ExbB proton channel [Hydrogenobaculum sp. Y04AAS1]
Length = 151
Score = 90.6 bits (224), Expect = 1e-16, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYS-NNVVSIPGIIESLISILLGL 186
+ +L L + + +G+ G VLG++ F + V + GI ++L+S +GL
Sbjct: 58 LDRRLGILATFGNNAPFIGLFGTVLGVIKAFNDLGNSSQFGVKVVMEGISQALVSTAMGL 117
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEG 212
V+IPS +AYN F+ K + E
Sbjct: 118 FVAIPSVVAYNYFVRKMKYLVLLHES 143
Score = 39.0 bits (90), Expect = 0.46, Method: Composition-based stats.
Identities = 14/94 (14%), Positives = 38/94 (40%), Gaps = 3/94 (3%)
Query: 27 IITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ---LFWSGQSLETVCKSLKNHHNIG 83
++ LL + SI S +V+I++ + + + ++ F++ + L + N IG
Sbjct: 17 VLYLLIVMSIFSVAVMIERFLTYRYISKRLELFKELELRIALDRRLGILATFGNNAPFIG 76
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMM 117
L + + + + + + I + +
Sbjct: 77 LFGTVLGVIKAFNDLGNSSQFGVKVVMEGISQAL 110
>gi|28871000|ref|NP_793619.1| MotA/TolQ/ExbB proton channel family protein [Pseudomonas syringae
pv. tomato str. DC3000]
gi|28854249|gb|AAO57314.1| MotA/TolQ/ExbB proton channel family protein [Pseudomonas syringae
pv. tomato str. DC3000]
Length = 214
Score = 90.6 bits (224), Expect = 2e-16, Method: Composition-based stats.
Identities = 44/203 (21%), Positives = 82/203 (40%), Gaps = 15/203 (7%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV-CKSLKN-HHNIGLA 85
+ + + SI + +II++ R W + + + LK + L
Sbjct: 1 MLPIILSSIAAAGIIIERLWTLRASRIAPPHLLGQAWQWIQEKKLDNEKLKQLRADSPLG 60
Query: 86 AIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLV 145
I + ++ K + + ++ A AR + ++ LS LGS+++ L+
Sbjct: 61 EILAAGLANSKHGR-----------EIMKECIEEAAARVIHDLERYLSALGSIAAMAPLL 109
Query: 146 GILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDS 203
G+LG VLGM+ F S G +N V GI ++LI GL V+IP+ +
Sbjct: 110 GLLGTVLGMIEIFGSFNSTGATANAGVLASGISKALICTASGLIVAIPAIFFHRFLQSRV 169
Query: 204 KKFAMQMEGFANEFSAILSRQTE 226
+ + ME A ++ +
Sbjct: 170 DELVVGMEQQAIRLVEVVQGDRD 192
>gi|209573898|gb|ACI62887.1| TonB system transport protein ExbB4 [Acidithiobacillus thiooxidans]
Length = 205
Score = 90.6 bits (224), Expect = 2e-16, Method: Composition-based stats.
Identities = 27/187 (14%), Positives = 72/187 (38%), Gaps = 12/187 (6%)
Query: 40 SVIIQKSVNFITLRRQFREFEQLFWSGQSLE--TVCKSLKNHHNIGLAAIFMSAMSEWKK 97
+V++ + + F Q L+ + ++ ++ AA+ +A
Sbjct: 7 AVMVDRFWYLPRTILRGLVFVQELGRHGRLDREALSTLAEDAGDLPEAALLRTAA----- 61
Query: 98 SCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGF 157
A S + + ++ ++ ++ +L L ++ + L+G+ G ++GM
Sbjct: 62 -----AHSGQVKGEALASRLEESVLVIAPKLDRRLWLLDTIITLAPLLGLFGTIIGMFHA 116
Query: 158 FQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEF 217
F +A + G+ ++L+S GL +++ + +N F + +Q++
Sbjct: 117 FSVLAQPGHAPMQVTGGVADALVSTASGLFIAMLGLLTFNAFNNQVRMILLQLDSVKTML 176
Query: 218 SAILSRQ 224
+ Q
Sbjct: 177 INRMDGQ 183
>gi|291279653|ref|YP_003496488.1| biopolymer transport protein, ExbB/TolQ family [Deferribacter
desulfuricans SSM1]
gi|290754355|dbj|BAI80732.1| biopolymer transport protein, ExbB/TolQ family [Deferribacter
desulfuricans SSM1]
Length = 201
Score = 90.6 bits (224), Expect = 2e-16, Method: Composition-based stats.
Identities = 41/213 (19%), Positives = 86/213 (40%), Gaps = 20/213 (9%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
+F + + G+ + + S++S +V +++ F +E +
Sbjct: 1 MFEIIQKGGVL----MYPIIALSVISLAVFLERLFTLRKNN---------FVPSTFMEKL 47
Query: 73 CKSLKNHH---NIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
L+ L + + MSE P+ R+ + + + ++
Sbjct: 48 YIYLEKKDFEDAKNLCELQKNPMSEIAYEILNNLDLPVT---RLMELAEETGRFQASKLE 104
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVS-IPGIIESLISILLGLCV 188
L L ++ + L+G+LG VLGM+ F I+ N + GI E+L++ GL V
Sbjct: 105 RFLPTLQTIGNIAPLLGLLGTVLGMIKTFIVISEQGVGNAQALAGGISEALLTTAAGLSV 164
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+IP+ + Y+ S+K ++ME + ++
Sbjct: 165 AIPTVLFYHIVRHRSEKLTLEMEKATAKVINLI 197
>gi|187478591|ref|YP_786615.1| biopolymer transport protein [Bordetella avium 197N]
gi|115423177|emb|CAJ49708.1| biopolymer transport protein [Bordetella avium 197N]
Length = 198
Score = 90.6 bits (224), Expect = 2e-16, Method: Composition-based stats.
Identities = 23/126 (18%), Positives = 55/126 (43%)
Query: 97 KSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMG 156
+ + R ++ + ++ A +E+ + +G+++ L+G+ G V+GM+
Sbjct: 72 RILAEVLRMRHAPREALRDAVETAGQGIAQELNRYIPAIGTVAMVAPLMGLFGTVVGMIE 131
Query: 157 FFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANE 216
F + ++ GI +L + G+ ++IP++IA+ F + ME A
Sbjct: 132 IFGAYNPGSTDPAQLAHGISVALYNTGFGILIAIPATIAHRFFRSRVDSYLNTMEQLAAR 191
Query: 217 FSAILS 222
+ +
Sbjct: 192 LARGVQ 197
>gi|146298224|ref|YP_001192815.1| MotA/TolQ/ExbB proton channel [Flavobacterium johnsoniae UW101]
gi|146152642|gb|ABQ03496.1| MotA/TolQ/ExbB proton channel [Flavobacterium johnsoniae UW101]
Length = 230
Score = 90.6 bits (224), Expect = 2e-16, Method: Composition-based stats.
Identities = 43/219 (19%), Positives = 89/219 (40%), Gaps = 20/219 (9%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLF---WS 65
+IS+ ++ G I L +F + VI ++ + R Q
Sbjct: 27 TEISVLGFILKGGFF--LIPIALLLF--YTIYVIFERYLYIQKASRIDSRLMQDVGDKLH 82
Query: 66 GQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
++ + +++ ++ + I + + + I+ MD A E+
Sbjct: 83 AGNI-ELARTIVERNDTAVGNILKEGVLVIGRPIAE-----------IESNMDRAADIEI 130
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILL 184
E+ +L LG ++ +G +G + G++ F SI+ + ++ +I G+ E +IS
Sbjct: 131 GEMERRLGHLGLIAGIAPTLGFIGTISGVIKIFYSISVTENISIGNISGGLYEKMISSGS 190
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
GL V I + AY+ FA++++ EF I+ R
Sbjct: 191 GLIVGIIAYSAYHLLNGKIDDFALKIQKQILEFVNIIQR 229
>gi|254413562|ref|ZP_05027332.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Microcoleus chthonoplastes PCC 7420]
gi|196179669|gb|EDX74663.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Microcoleus chthonoplastes PCC 7420]
Length = 219
Score = 90.2 bits (223), Expect = 2e-16, Method: Composition-based stats.
Identities = 38/209 (18%), Positives = 82/209 (39%), Gaps = 24/209 (11%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVN-FITLRRQFREFEQLFWSGQS-LE 70
++ L +Q G ++ L SIL+ S + ++ F L ++ + + + S LE
Sbjct: 4 VYDLLIQGGF----VMLPLLGLSILTISCGLDRAWFWFQLLSQEATLVDDVLGTAHSNLE 59
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
++ ++ + + + + M+ A +EL ++ +
Sbjct: 60 QARDIAESAQHLPIGRFLYA-----------PLKLKQPTPETFRLAMEAAGDKELIKMRK 108
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV----SIPGIIESLISILLGL 186
L ++ + L+G+LG V G++ F ++ V GI E+LI+ G+
Sbjct: 109 GEKLLETIVAVAPLLGLLGTVTGLISTFNNLKIGGGGTTVEATKVAGGIGEALITTAAGM 168
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFAN 215
V+I + + + QM+ FA
Sbjct: 169 IVAIIALLI---LRTIVTLHSQQMDYFAE 194
>gi|90022457|ref|YP_528284.1| biopolymer transport proteins-like protein [Saccharophagus
degradans 2-40]
gi|89952057|gb|ABD82072.1| MotA/TolQ/ExbB proton channel [Saccharophagus degradans 2-40]
Length = 464
Score = 90.2 bits (223), Expect = 2e-16, Method: Composition-based stats.
Identities = 36/205 (17%), Positives = 87/205 (42%), Gaps = 22/205 (10%)
Query: 12 SIFALFMQMG-LAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
S+ ++ G A+ ++ LF ++ + K L F + +
Sbjct: 238 SVIEHIVKGGLWAIPIVLFGLFAL-----AIALHKVAQLWRL-----PAYVSF----TPQ 283
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
T+ L+N + + ++ + ++R D ++ + + ++ + +
Sbjct: 284 TLANVLRNAQSP-----LAQKVQGMQRILLDIGANTKSARER-DDLLFMQLQQDKTTLEK 337
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVS 189
++ + ++ L+G+LG V GM+ F+ + + + + V GI ++L++ LGL V+
Sbjct: 338 RIGAIAITAAVAPLLGLLGTVSGMIETFKMMTLFGAGDPEVVSGGIAQALVTTELGLVVA 397
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFA 214
IP+ I +K + ++E FA
Sbjct: 398 IPALILNAVLSRKAKTYYNELESFA 422
>gi|84623834|ref|YP_451206.1| biopolymer transport protein [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|188576505|ref|YP_001913434.1| biopolymer transport protein [Xanthomonas oryzae pv. oryzae PXO99A]
gi|84367774|dbj|BAE68932.1| biopolymer transport protein [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|188520957|gb|ACD58902.1| biopolymer transport protein [Xanthomonas oryzae pv. oryzae PXO99A]
Length = 220
Score = 90.2 bits (223), Expect = 2e-16, Method: Composition-based stats.
Identities = 27/111 (24%), Positives = 56/111 (50%), Gaps = 1/111 (0%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
++ I ++ + + L+ LG+++SAG L+G+LG V+GM+ F I + +V
Sbjct: 85 RELIRERIEDTGRHVVHRMEHYLNALGTIASAGPLLGLLGTVVGMIQMFLGILDHGVGDV 144
Query: 170 -VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
GI ++L+ G+ +++P+ +A+ F + ++ME A
Sbjct: 145 NQLAGGIGKALVCTATGMIIAVPALMAHRFFKGRIAGYIIEMEQEATLLLD 195
>gi|254787159|ref|YP_003074588.1| transporter proton channel domain containing protein
[Teredinibacter turnerae T7901]
gi|237686247|gb|ACR13511.1| transporter, proton channel domain containing protein
[Teredinibacter turnerae T7901]
Length = 436
Score = 90.2 bits (223), Expect = 2e-16, Method: Composition-based stats.
Identities = 37/191 (19%), Positives = 84/191 (43%), Gaps = 12/191 (6%)
Query: 32 FIFSILSWSVIIQKSVNFITLRRQFREFEQLFW-SGQSLETVCKSLKNHHNIGLAAIFMS 90
F L+ + + K+V + L + +G + ++L+ ++A
Sbjct: 252 LFFGALALVIALVKAVQLLRLPKVSDTAATRIRMAGTDAKNTAQALEK-----MSANTRG 306
Query: 91 AMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGA 150
A ++ + K S G++D + + + I + + + ++ L+G+LG
Sbjct: 307 AQNDLIEIVLKNPAS--GLRDDL---LVACLREHRFRIERFMGVVATSAAVAPLLGLLGT 361
Query: 151 VLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQ 209
V GM+ F+ + + + + ++ GI E+L++ LGL V+IPS + ++ + Q
Sbjct: 362 VSGMITTFKMMTIFGAGDAATVSGGISEALVTTELGLIVAIPSLVVSALLTRKAQSYNNQ 421
Query: 210 MEGFANEFSAI 220
+E A + S +
Sbjct: 422 LETLAIKLSKL 432
>gi|58581922|ref|YP_200938.1| biopolymer transport protein [Xanthomonas oryzae pv. oryzae
KACC10331]
gi|58426516|gb|AAW75553.1| biopolymer transport protein [Xanthomonas oryzae pv. oryzae
KACC10331]
Length = 246
Score = 90.2 bits (223), Expect = 2e-16, Method: Composition-based stats.
Identities = 27/111 (24%), Positives = 56/111 (50%), Gaps = 1/111 (0%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
++ I ++ + + L+ LG+++SAG L+G+LG V+GM+ F I + +V
Sbjct: 111 RELIRERIEDTGRHVVHRMEHYLNALGTIASAGPLLGLLGTVVGMIQMFLGILDHGVGDV 170
Query: 170 -VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
GI ++L+ G+ +++P+ +A+ F + ++ME A
Sbjct: 171 NQLAGGIGKALVCTATGMIIAVPALMAHRFFKGRIAGYIIEMEQEATLLLD 221
>gi|330999341|ref|ZP_08323058.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Parasutterella excrementihominis YIT 11859]
gi|329575199|gb|EGG56750.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Parasutterella excrementihominis YIT 11859]
Length = 201
Score = 90.2 bits (223), Expect = 2e-16, Method: Composition-based stats.
Identities = 40/219 (18%), Positives = 89/219 (40%), Gaps = 20/219 (9%)
Query: 14 FALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVC 73
+L + G ++ L + SI+ ++II +S+++I + +
Sbjct: 1 MSLIIAGGW----VMVPLLLISIIVLALIIDRSLSYI---------WNPLPDADQQKNIL 47
Query: 74 KSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLS 133
+ ++ F + G+ + + + + I+ + ++L
Sbjct: 48 EKIQKGEFAAAETYFSETPWLKNYASALGSSEKMPFYEGV---LAENISSLAAMMDKRLP 104
Query: 134 FLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSN--NVVSIPGIIESLISILLGLCVSIP 191
L ++ L+G+LG ++GM+ F IA S + GI ++LI+ GL ++IP
Sbjct: 105 LLATLGRISPLLGLLGTIIGMIQTFAVIAQSRSGIDMELLAEGIWQALITTATGLIIAIP 164
Query: 192 SSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
+ Y F+ + AN+ A+L +Q++ N +
Sbjct: 165 AVFCYRIFLSIESNRLDYLNRVANK--AVLYKQSQNNAA 201
>gi|294054024|ref|YP_003547682.1| MotA/TolQ/ExbB proton channel [Coraliomargarita akajimensis DSM
45221]
gi|293613357|gb|ADE53512.1| MotA/TolQ/ExbB proton channel [Coraliomargarita akajimensis DSM
45221]
Length = 264
Score = 90.2 bits (223), Expect = 2e-16, Method: Composition-based stats.
Identities = 46/203 (22%), Positives = 83/203 (40%), Gaps = 16/203 (7%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLET 71
++ F Q GLA + L FS+ ++ +++ ++ + +
Sbjct: 55 TLLGTFKQGGLA----MYPLLAFSVATFGLVLYNAITIRSSNIINPDVVD--------NE 102
Query: 72 VCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQ---DRIDRMMDVAIARELEEI 128
V +L+ G I + G + ID+ D A + EL +
Sbjct: 103 VMPALQERDYTGAMEICDNNSGPLLNILHNGLETTTNGHFDEQTIDKAFDEAASVELAKP 162
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSN-NVVSIPGIIESLISILLGLC 187
+++L ++S +VG+LG V GM+ F++IA + I E+LI+ GL
Sbjct: 163 FVFINYLQVIASVAPMVGLLGTVSGMVKAFRTIAEQGMGRPELLADNISEALITTASGLT 222
Query: 188 VSIPSSIAYNKFIEDSKKFAMQM 210
V+IP+ IAY F K A ++
Sbjct: 223 VAIPALIAYFYFKNRYGKIASEV 245
>gi|288926924|ref|ZP_06420823.1| MotA/TolQ/ExbB proton channel family protein [Prevotella buccae
D17]
gi|288336322|gb|EFC74704.1| MotA/TolQ/ExbB proton channel family protein [Prevotella buccae
D17]
Length = 227
Score = 90.2 bits (223), Expect = 2e-16, Method: Composition-based stats.
Identities = 38/205 (18%), Positives = 80/205 (39%), Gaps = 24/205 (11%)
Query: 33 IFSILSWSVI------IQKSVNFI----TLRRQFREFEQLFWSGQSLETVCKSLKNHHNI 82
S+++ ++I I++ + +R + E+ G LE K+L +
Sbjct: 33 FMSLVALALILGLAFCIERIIYLSLSEINAKRLMADIEERLQRG-DLEEA-KTLCRNTRG 90
Query: 83 GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAG 142
+AAI + S + I+R + + + + S++ +
Sbjct: 91 PVAAICYQGLLRAADSL-----------EDIERSVVSYGTVQAANLEKGCSWITLFIAMA 139
Query: 143 LLVGILGAVLGMMGFFQSIAGYYS-NNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIE 201
+G LG V+GM+ F I + + G+ +LI+ + G+ V++ + YN +
Sbjct: 140 PSLGFLGTVIGMVMAFDQIELAGDISPTIVASGMKVALITTIFGIIVALILQVFYNYILS 199
Query: 202 DSKKFAMQMEGFANEFSAILSRQTE 226
+ QME A +L+R+
Sbjct: 200 KIEHITSQMEESAITLLDLLAREKH 224
>gi|193215622|ref|YP_001996821.1| MotA/TolQ/ExbB proton channel [Chloroherpeton thalassium ATCC
35110]
gi|193089099|gb|ACF14374.1| MotA/TolQ/ExbB proton channel [Chloroherpeton thalassium ATCC
35110]
Length = 258
Score = 90.2 bits (223), Expect = 2e-16, Method: Composition-based stats.
Identities = 38/208 (18%), Positives = 92/208 (44%), Gaps = 18/208 (8%)
Query: 23 AVKCIITLLFIFSILSWSVIIQKSVNFITLR------RQFREFEQLFWSGQSLETVCKSL 76
+ ++ +LFI +++ ++S+++ + + +Q G + +
Sbjct: 48 VLIGVLLMLFI--VVT-----ERSISYKKADGKGNLDQLLKAVKQDIERGA-INEAMQKC 99
Query: 77 KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLG 136
+ HN +++ MS + ++ + R I + + + +D + E + L+ +
Sbjct: 100 E-RHNSSISSCIMSGLERFRSLDEVEPRFNAKISE-VQKAIDESANFESAQYETNLTPIK 157
Query: 137 SMSSAGLLVGILGAVLGMMGFFQSIA--GYYSNNVVSIPGIIESLISILLGLCVSIPSSI 194
++++ L+G+LG LGM+ F ++A G ++ I E+L + GL +I ++
Sbjct: 158 TIATIATLIGLLGTTLGMIRAFAALAESGGAADATKLSAAISEALFNTAFGLTGAILGTV 217
Query: 195 AYNKFIEDSKKFAMQMEGFANEFSAILS 222
A+N F +F ++ A E L+
Sbjct: 218 AFNYFRARIDEFTYAIDESAFEVIQTLT 245
>gi|83950280|ref|ZP_00959013.1| MotA/TolQ/ExbB proton channel family domain protein [Roseovarius
nubinhibens ISM]
gi|83838179|gb|EAP77475.1| MotA/TolQ/ExbB proton channel family domain protein [Roseovarius
nubinhibens ISM]
Length = 222
Score = 90.2 bits (223), Expect = 2e-16, Method: Composition-based stats.
Identities = 40/190 (21%), Positives = 71/190 (37%), Gaps = 15/190 (7%)
Query: 17 FMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSL 76
MQ ++ +L SI + +VI K F+ ++L +
Sbjct: 9 VMQAADLGGPVVLVLIATSIATVAVIFYKLWQFLRA---------GVGRHKALREAVTAW 59
Query: 77 KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLG 136
A + S D G DR+ + A + FL
Sbjct: 60 DAGDRAAARAALGRSKSYLAPVIDMGFSGQADDLDRLRSEAEARFA----RLERGFRFLD 115
Query: 137 SMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGLCVSIPSSI 194
++S L+G+ G VLGM+ FQ++ AG + + GI +L++ +GL V++P+S+
Sbjct: 116 TVSQLAPLLGLFGTVLGMIQAFQALQEAGSQVDPSILAGGIWVALLTTAVGLAVAMPTSM 175
Query: 195 AYNKFIEDSK 204
+ F
Sbjct: 176 VLSWFESRMD 185
>gi|171915544|ref|ZP_02931014.1| MotA/TolQ/ExbB proton channel family protein [Verrucomicrobium
spinosum DSM 4136]
Length = 269
Score = 90.2 bits (223), Expect = 2e-16, Method: Composition-based stats.
Identities = 32/219 (14%), Positives = 85/219 (38%), Gaps = 27/219 (12%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRR-----QFREFEQL 62
+ + +++ + G ++ + + S+L+ ++ + ++ + + L
Sbjct: 36 VHNKTLWEQIKEGGW----VMVPIGVCSVLTLYLMGDGFLRVTNPKKLLPSEEIEAVKSL 91
Query: 63 FWSGQSLETVCKSLKNHHNI--GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVA 120
+ G+ + K+ + + + S + E K + ++G +
Sbjct: 92 YRQGK-YNDAYQFCKSRASAFANVTRVATSQLGEGKSATEEGVIAE-------------- 136
Query: 121 IARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESL 179
I +E + +S+L + ++G++G V GMMG F ++ + I E L
Sbjct: 137 IMKENSRMQTFISYLSVIGVCTPMIGLVGTVTGMMGAFATLGTSGIGDPSQLSAHIGEVL 196
Query: 180 ISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFS 218
++ GL V+IP+ AY + + ++ ++
Sbjct: 197 VATASGLFVAIPAFTAYYWLRNRAARVLHDLQDTVSQLM 235
>gi|149192232|ref|ZP_01870447.1| biopolymer transport protein ExbB-related protein [Vibrio shilonii
AK1]
gi|148833934|gb|EDL50956.1| biopolymer transport protein ExbB-related protein [Vibrio shilonii
AK1]
Length = 452
Score = 90.2 bits (223), Expect = 2e-16, Method: Composition-based stats.
Identities = 26/110 (23%), Positives = 54/110 (49%), Gaps = 1/110 (0%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV- 169
+ ++ + +I E + + LS L +++ ++G+LG V GM+ FQ I + +
Sbjct: 327 EALELRLLESIMDEQQHLERGLSMLKLLAALAPMLGLLGTVTGMIETFQVITQFGNAEPR 386
Query: 170 VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
V GI +L++ +LGL ++P +A+N ++ +E + A
Sbjct: 387 VMAGGISMALVTTVLGLITAMPLLLAHNLLSSKAETIRNILERQSVGLVA 436
>gi|83945424|ref|ZP_00957772.1| MotA/TolQ/ExbB proton channel family protein [Oceanicaulis
alexandrii HTCC2633]
gi|83851258|gb|EAP89115.1| MotA/TolQ/ExbB proton channel family protein [Oceanicaulis
alexandrii HTCC2633]
Length = 465
Score = 89.9 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 42/215 (19%), Positives = 87/215 (40%), Gaps = 32/215 (14%)
Query: 17 FMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSL 76
F Q G+ K I LL ++ ++ + + Q R
Sbjct: 281 FEQGGIVAKIIAVLLIFSAVFGLFRLVSLLLTNSAINAQKRR-----------------S 323
Query: 77 KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLG 136
++ L I ++ +++ D+ + I+ +D AI RE ++ L+F+
Sbjct: 324 TASNSNPLGRIMLA----YEEVKDRPT-------ETIELKIDEAILRETPKLEFGLNFIK 372
Query: 137 SMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIA 195
++ L+G+LG V GM+ F I + + + + GI E+L++ + GL +IP
Sbjct: 373 LAAAVAPLLGLLGTVTGMIRTFTQITLFGTGDPRIMAGGISEALVTTVSGLIAAIPLLFI 432
Query: 196 YNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
++ ++ +E A + I++R E +
Sbjct: 433 HSFAASFARGAQQTLEEQA---AGIIARHAEEKSA 464
>gi|291532440|emb|CBL05553.1| Biopolymer transport proteins [Megamonas hypermegale ART12/1]
Length = 205
Score = 89.9 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 40/190 (21%), Positives = 82/190 (43%), Gaps = 16/190 (8%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS---GQSLETVCKSLKNHHNI 82
++ +L I SI ++ +++ + F+ R F Q F+ +E ++L +
Sbjct: 16 LVMYILLICSIFIITIGVERLLYFMKAD-SGRAFAQNFYKLMINNKIEEA-RNLAQNSKG 73
Query: 83 GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAG 142
LA + A + K +K + +++V + + E+L +L + +
Sbjct: 74 DLAFLVDFA---FNKMQNKNI--------NLMMLLEVQSGISISKFRERLYYLNVIVTMA 122
Query: 143 LLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIED 202
L+G+LG ++GM+ F + G+ E+LI+ GLCV+I S + F++
Sbjct: 123 PLLGLLGTIIGMISAFSVFNLEEGQAIAITGGVGEALIATATGLCVAIVSLAIHAYFVQR 182
Query: 203 SKKFAMQMEG 212
+ ME
Sbjct: 183 IDRIVTDMEQ 192
>gi|332534323|ref|ZP_08410166.1| MotA/TolQ/ExbB proton channel family protein [Pseudoalteromonas
haloplanktis ANT/505]
gi|332036233|gb|EGI72706.1| MotA/TolQ/ExbB proton channel family protein [Pseudoalteromonas
haloplanktis ANT/505]
Length = 441
Score = 89.9 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 40/210 (19%), Positives = 86/210 (40%), Gaps = 23/210 (10%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLET 71
S + GL I +LF + ++ + K+ + L + S L+
Sbjct: 247 SPLEHLEKGGL--WAIPIILFAC--FALTIALLKAAQLLRLSKI------KMHSQMQLQQ 296
Query: 72 VCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEK 131
+ K+ + G+ + + +K + + + + + ++
Sbjct: 297 LFKAENSSEFAGMQQQLFNLTLQSEKGQVRDDQ------------LFNQLIHDKHKLDNF 344
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSI 190
+ + ++ L+G+LG V GM+ F+ + + S + V GI ++LI+ LGL V+I
Sbjct: 345 IGAIAVTAAVAPLLGLLGTVSGMIETFKMMTLFGSGDPEVVSGGIAQALITTELGLVVAI 404
Query: 191 PSSIAYNKFIEDSKKFAMQMEGFANEFSAI 220
P+ + +K + Q+EGFA + S +
Sbjct: 405 PALVLNALLSRKAKAYYSQLEGFALQLSQL 434
>gi|149176886|ref|ZP_01855496.1| probable tolQ protein [Planctomyces maris DSM 8797]
gi|148844323|gb|EDL58676.1| probable tolQ protein [Planctomyces maris DSM 8797]
Length = 297
Score = 89.9 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 37/199 (18%), Positives = 85/199 (42%), Gaps = 17/199 (8%)
Query: 29 TLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFW---SGQSLETVCKSLKNHHNIGLA 85
+L + S L ++I+ ++ + F + + + + K+ + +A
Sbjct: 107 FILLLLSFLMVALIMANVLSIRRDNLMPPDLIGAFEEKINSKDYQGAYELAKSDDSF-VA 165
Query: 86 AIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLV 145
+ + +S+ + G + ++ M +V + + KLS+L + + ++
Sbjct: 166 RVLAAGLSKLNQ----------GYAEAVEGMQEVGEDENMA-MEHKLSYLALIGAIAPMI 214
Query: 146 GILGAVLGMMGFFQSIAGYYSNNV--VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDS 203
G++G V GM+ FQ+IA ++ GI +L + L GL V+IP+ I Y+
Sbjct: 215 GLMGTVYGMILSFQTIANSATSPKPSELADGISTALFTTLEGLTVAIPAMIFYSLLRNRV 274
Query: 204 KKFAMQMEGFANEFSAILS 222
+F++++ + S
Sbjct: 275 ARFSLEVGMISESLMNRFS 293
>gi|282849621|ref|ZP_06259005.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Veillonella parvula ATCC 17745]
gi|282580558|gb|EFB85957.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Veillonella parvula ATCC 17745]
Length = 203
Score = 89.9 bits (222), Expect = 3e-16, Method: Composition-based stats.
Identities = 28/118 (23%), Positives = 54/118 (45%), Gaps = 3/118 (2%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI 172
+ M+ +A + L +L ++ + L+G+LG V GM+G FQ +
Sbjct: 89 LQSKMEDMVAHVYTHASRGLDWLSTIVTIAPLLGLLGTVTGMIGAFQVFGADGAVPTAIT 148
Query: 173 PGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
G+ E+L++ GLCV+I + + F + ++E + FS +L G+ +
Sbjct: 149 GGVGEALVATASGLCVAIVALCFHAGFTHHVRMTISRLE---DSFSRVLDSYDRGHAA 203
>gi|254490954|ref|ZP_05104136.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Methylophaga thiooxidans DMS010]
gi|224463863|gb|EEF80130.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Methylophaga thiooxydans DMS010]
Length = 232
Score = 89.9 bits (222), Expect = 3e-16, Method: Composition-based stats.
Identities = 38/191 (19%), Positives = 75/191 (39%), Gaps = 15/191 (7%)
Query: 27 IITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQL---FWSGQSLETVCKSLKNHHNIG 83
++ +L S+++ ++I+ K F+ R + + W + L
Sbjct: 27 VVWILSAMSVVALAIILMKLWQFVLTRPETSAHLERVLGLWKQGEADQAMAILNTKRP-- 84
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
+ E +G + +D L ++ L L +++
Sbjct: 85 --------VDELLGLSIQGLNKAQNNVAMLKEELDRVATLRLNQLRAYLRPLEVIATLSP 136
Query: 144 LVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIE 201
L+G+LG VLGM+ FQ + AG + V GI ++L++ +GL V+IP + +N
Sbjct: 137 LLGLLGTVLGMIVAFQQMEAAGNQVDPSVLSGGIWQALLTTAVGLAVAIPVVMMHNWMER 196
Query: 202 DSKKFAMQMEG 212
++ A M
Sbjct: 197 KVERVAALMND 207
>gi|218961294|ref|YP_001741069.1| MotA/TolQ/ExbB proton channel family protein (fragment) [Candidatus
Cloacamonas acidaminovorans]
gi|167729951|emb|CAO80863.1| MotA/TolQ/ExbB proton channel family protein (fragment) [Candidatus
Cloacamonas acidaminovorans]
Length = 145
Score = 89.9 bits (222), Expect = 3e-16, Method: Composition-based stats.
Identities = 30/111 (27%), Positives = 54/111 (48%), Gaps = 3/111 (2%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV- 169
D I++ M+ EL + + L +L + ++ L+G LG V+GM+ F I + V
Sbjct: 24 DLINQSMEATANLELHRLEKGLGWLSTFAAIAPLIGFLGTVIGMVNVFMKIQAASQSGVD 83
Query: 170 --VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFS 218
+ GI +L++ + GL V I + I YN ++ + M+ A E+
Sbjct: 84 ISMLAGGIWVALLTTVGGLIVGIATIIFYNDLVQKLENIVKDMQENAVEYI 134
>gi|182414163|ref|YP_001819229.1| MotA/TolQ/ExbB proton channel [Opitutus terrae PB90-1]
gi|177841377|gb|ACB75629.1| MotA/TolQ/ExbB proton channel [Opitutus terrae PB90-1]
Length = 221
Score = 89.9 bits (222), Expect = 3e-16, Method: Composition-based stats.
Identities = 44/230 (19%), Positives = 105/230 (45%), Gaps = 26/230 (11%)
Query: 1 MNNYGLAIM--DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLR--RQF 56
M++ LA + D ++ LF++ G I+ + + S + ++V++++ + R+
Sbjct: 3 MHSLPLAFLLGDATLMELFIKGGP----IMWPILLVSFIGFTVVVERLLFIFRENSHREP 58
Query: 57 REFEQLFWSG--QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRID 114
E++ + +E+ + + F++ + + S + + S I
Sbjct: 59 EVVEKMLEQVEKRDIESALAIGRQSKD------FVAKILVYTLSNREYSLSNAFI----- 107
Query: 115 RMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-P 173
A +EL + ++ L ++ +A L+G+LG V GMM F S+ G S+ +I
Sbjct: 108 ----RASGQELARFGQGMATLDTVITAAPLLGLLGTVTGMMRTFGSMTGDISSAAANITG 163
Query: 174 GIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
G+ E+LI+ GL +++ + + YN +++ ++ +N ++ +
Sbjct: 164 GVAEALIATACGLAIAVTALMPYNYLNARAEEAKHEVADASNALEILIKK 213
>gi|304382646|ref|ZP_07365140.1| MotA/TolQ/ExbB proton channel family protein [Prevotella marshii
DSM 16973]
gi|304336271|gb|EFM02513.1| MotA/TolQ/ExbB proton channel family protein [Prevotella marshii
DSM 16973]
Length = 288
Score = 89.9 bits (222), Expect = 3e-16, Method: Composition-based stats.
Identities = 33/200 (16%), Positives = 76/200 (38%), Gaps = 14/200 (7%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE--TVCKSLKNHHNIGLA 85
++L+ + ++ + I++ + + F + S + K L +A
Sbjct: 96 MSLVALALVIGLAFCIERIIYLSLSEIDAKRFMRDLDSKITANDMEGAKELCRTTRGPVA 155
Query: 86 AIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLV 145
+I + +S D I+R + A + + + S++ + +
Sbjct: 156 SICYQGLVRIHESL-----------DNIERSVASYGAVQAANLEKGCSWITLFIAMAPSL 204
Query: 146 GILGAVLGMMGFFQSIAGYYS-NNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSK 204
G LG V+GM+ F I + + G+ +LI+ + G+ V++ + YN + +
Sbjct: 205 GFLGTVIGMVMAFDQIQQAGDISPTIVASGMKVALITTIFGIIVALILQVFYNYILSKIE 264
Query: 205 KFAMQMEGFANEFSAILSRQ 224
QME A +++
Sbjct: 265 HLTAQMEESAIALLDAIAKH 284
>gi|114562404|ref|YP_749917.1| MotA/TolQ/ExbB proton channel [Shewanella frigidimarina NCIMB 400]
gi|114333697|gb|ABI71079.1| MotA/TolQ/ExbB proton channel [Shewanella frigidimarina NCIMB 400]
Length = 217
Score = 89.9 bits (222), Expect = 3e-16, Method: Composition-based stats.
Identities = 30/215 (13%), Positives = 84/215 (39%), Gaps = 19/215 (8%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG---QSL 69
I A G + I +L ++ ++ I++ + + R ++ L + +
Sbjct: 7 IIAFLQNGGPFIYPIALVL----VVGLAITIERWLYLSSAHRTNQQAFALIKNALKTGDI 62
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
T+ + +NH + + S ++ S ++ ++ M+ + + +
Sbjct: 63 NTISQHAQNHK-APVFDVLQSGIARI---------SSASRREDVEYAMEETVMEYMLRLE 112
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV--SIPGIIESLISILLGLC 187
++ F+ ++++ L+G+LG ++G++ F ++A I ++ + GL
Sbjct: 113 KRTPFIATLANIATLLGLLGTIMGLIAAFSAVASADPAEKANLLSSSISVAMNTTAFGLI 172
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
+IP + ++ + +E + LS
Sbjct: 173 TAIPLILFHSSLQTKTATIVDSIEMAGIKLLNSLS 207
>gi|223938219|ref|ZP_03630115.1| MotA/TolQ/ExbB proton channel [bacterium Ellin514]
gi|223893091|gb|EEF59556.1| MotA/TolQ/ExbB proton channel [bacterium Ellin514]
Length = 219
Score = 89.5 bits (221), Expect = 3e-16, Method: Composition-based stats.
Identities = 35/154 (22%), Positives = 64/154 (41%), Gaps = 3/154 (1%)
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
LE + +L+N + + + +G + +A ELE
Sbjct: 50 LEQLLAALENSDVPQATKLSKGSEDPVIRMIYRGLNHVNASMQG---ALQLAAGIELERA 106
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCV 188
L+ + ++ + L+G+LG V G+M F SI + + GI E+LI+ GL +
Sbjct: 107 GRFLTVMDTLVTLAPLLGLLGTVTGLMRAFLSIGDAELSVMAVTGGIGEALIATACGLGI 166
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
+I S I YN F + ++E A +++
Sbjct: 167 AIISLIPYNYFNRKITRLQFELETAATNVEVMVN 200
>gi|315608823|ref|ZP_07883799.1| MotA/TolQ/ExbB proton channel family protein [Prevotella buccae
ATCC 33574]
gi|315249517|gb|EFU29530.1| MotA/TolQ/ExbB proton channel family protein [Prevotella buccae
ATCC 33574]
Length = 364
Score = 89.5 bits (221), Expect = 3e-16, Method: Composition-based stats.
Identities = 38/205 (18%), Positives = 80/205 (39%), Gaps = 24/205 (11%)
Query: 33 IFSILSWSVI------IQKSVNFI----TLRRQFREFEQLFWSGQSLETVCKSLKNHHNI 82
S+++ ++I I++ + +R + E+ G LE K+L +
Sbjct: 170 FMSLVALALILGLAFCIERIIYLSLSEINAKRLMADIEERLQRG-DLEEA-KTLCRNTRG 227
Query: 83 GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAG 142
+AAI + S + I+R + + + + S++ +
Sbjct: 228 PVAAICYQGLLRAADSL-----------EDIERSVVSYGTVQAANLEKGCSWITLFIAMA 276
Query: 143 LLVGILGAVLGMMGFFQSIAGYYS-NNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIE 201
+G LG V+GM+ F I + + G+ +LI+ + G+ V++ + YN +
Sbjct: 277 PSLGFLGTVIGMVMAFDQIELAGDISPTIVASGMKVALITTIFGIIVALILQVFYNYILS 336
Query: 202 DSKKFAMQMEGFANEFSAILSRQTE 226
+ QME A +L+R+
Sbjct: 337 KIEHITSQMEESAITLLDLLAREKH 361
>gi|254444574|ref|ZP_05058050.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Verrucomicrobiae bacterium DG1235]
gi|198258882|gb|EDY83190.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Verrucomicrobiae bacterium DG1235]
Length = 202
Score = 89.5 bits (221), Expect = 3e-16, Method: Composition-based stats.
Identities = 35/131 (26%), Positives = 56/131 (42%), Gaps = 7/131 (5%)
Query: 103 ARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA 162
A+ + D + MD + L I ++ F + L G+LG V GM+ F ++
Sbjct: 75 AQHEVHSMDDVRDRMDEIRSSHLSRINSRIRFAAILVGTAPLTGLLGTVTGMLSTFAGLS 134
Query: 163 GYYSNNVV--SIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAI 220
+ N V GI E+LI+ GL ++IP I N QM+ F + +
Sbjct: 135 NSAAGNTVDLVAGGISEALITTQTGLVLAIPGYIMLNIVKRRRD----QMDAFCTQVEIL 190
Query: 221 -LSRQTEGNIS 230
L R +G I+
Sbjct: 191 TLKRFEKGKIA 201
>gi|95928838|ref|ZP_01311584.1| MotA/TolQ/ExbB proton channel [Desulfuromonas acetoxidans DSM 684]
gi|95135183|gb|EAT16836.1| MotA/TolQ/ExbB proton channel [Desulfuromonas acetoxidans DSM 684]
Length = 146
Score = 89.5 bits (221), Expect = 3e-16, Method: Composition-based stats.
Identities = 24/80 (30%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA-GYYSNNVVSIPGIIESLISILLGLC 187
++L+ L ++ + +G+ G VLG++ F + S V + GI E+L++ +GL
Sbjct: 60 QKRLTILATLGNNAPFIGLFGTVLGVIKAFHDLHLQQGSGIKVVMGGISEALVATAMGLL 119
Query: 188 VSIPSSIAYNKFIEDSKKFA 207
V+IP+ IAYN F + + +
Sbjct: 120 VAIPAVIAYNAFSKTLQTWL 139
Score = 39.0 bits (90), Expect = 0.47, Method: Composition-based stats.
Identities = 19/110 (17%), Positives = 41/110 (37%), Gaps = 8/110 (7%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRR----QFREFEQLFWSGQ 67
S+ +F+ G ++ +L S+++ VI+++ F+ LRR + LF +
Sbjct: 6 SLLRMFLGGGD---FVLYILLALSVVTLGVILERLYAFVHLRRCYGQLSKRDLLLFGQ-K 61
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMM 117
L + N IGL + + + + + I +
Sbjct: 62 RLTILATLGNNAPFIGLFGTVLGVIKAFHDLHLQQGSGIKVVMGGISEAL 111
>gi|330963822|gb|EGH64082.1| biopolymer transport protein ExbB [Pseudomonas syringae pv.
actinidiae str. M302091]
Length = 123
Score = 89.5 bits (221), Expect = 4e-16, Method: Composition-based stats.
Identities = 29/124 (23%), Positives = 54/124 (43%), Gaps = 5/124 (4%)
Query: 22 LAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHN 81
+ V ++ L +FS+LSW++++ KS ++ + Q ++F + FWS L T + +
Sbjct: 1 MIVPAVLWALIVFSVLSWALLLIKSAQYVRQKSQNKQFTKAFWSAPDLLTAAEHSAQYPG 60
Query: 82 IGLAAIFMSAMSEWK----KSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGS 137
LA I S + I DR++R + I +E + + L S
Sbjct: 61 -ALARIANSGFEAMAVDESPRTTQQLAHTINRSDRLERNLRQQIQKERRALESGQAILAS 119
Query: 138 MSSA 141
+ S
Sbjct: 120 IGST 123
>gi|282879340|ref|ZP_06288084.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Prevotella buccalis ATCC 35310]
gi|281298537|gb|EFA90962.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Prevotella buccalis ATCC 35310]
Length = 273
Score = 89.1 bits (220), Expect = 4e-16, Method: Composition-based stats.
Identities = 39/215 (18%), Positives = 82/215 (38%), Gaps = 24/215 (11%)
Query: 9 MDISIFALFMQMGLAVKCIITLL---FIFSILSWSVI--------IQKSVNFITLRRQFR 57
+++ + G V I LL S+ W I + K + +
Sbjct: 54 HPLNMLGTVYKGGWVVPIIFGLLCTVIAMSVERWIAISACSGKGSVIKFTENVKAALRNG 113
Query: 58 EFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMM 117
+ + + L + +A + ++ + +++ + + I
Sbjct: 114 DIAK-----------AEELCHKQGGSVANVVLADLKSYREMETTNIKLKEKVAT-IQNSH 161
Query: 118 DVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GII 176
D A A E+ +T L + ++ + G L + G VLGM+ F ++A + +++ GI
Sbjct: 162 DEATALEMPTMTMNLPIIATIVTLGTLTALFGTVLGMIRSFAALAAGGGADSMALSTGIS 221
Query: 177 ESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
E+L++ G+ S S ++YN F K M+
Sbjct: 222 EALVNTASGIATSWFSVVSYNYFTNKIDKLTFAMD 256
>gi|94985854|ref|YP_605218.1| MotA/TolQ/ExbB proton channel [Deinococcus geothermalis DSM 11300]
gi|94556135|gb|ABF46049.1| MotA/TolQ/ExbB proton channel [Deinococcus geothermalis DSM 11300]
Length = 230
Score = 89.1 bits (220), Expect = 4e-16, Method: Composition-based stats.
Identities = 41/217 (18%), Positives = 75/217 (34%), Gaps = 20/217 (9%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITL----RRQFREFEQLFWSG 66
+++ AL G + +L S+ ++ L +
Sbjct: 1 MNLLALIQAAGPL----LWVLLALSVYVIYTAAVRAQLLGRLGHDPSALIERTRAVTAES 56
Query: 67 QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
+ + + AA+ + +S + D + D
Sbjct: 57 GPAAALAELDRAADPTPAAAVLRAGLSRADRGVDAAQAAMNAAVLAAD-----------A 105
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYS-NNVVSIPGIIESLISILLG 185
++ LS LG+ + L+G+LG V+GM+ F + S GI E+LI+ G
Sbjct: 106 QLYAGLSALGTAAQIAPLLGLLGTVIGMVRSFLVFSSTTSPTPGQLATGISEALINTAGG 165
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
L V+I + +A N + + A Q E E A L+
Sbjct: 166 LIVAIVAYVARNALRAKADRIATQAERVREELPAWLA 202
>gi|296124040|ref|YP_003631818.1| MotA/TolQ/ExbB proton channel [Planctomyces limnophilus DSM 3776]
gi|296016380|gb|ADG69619.1| MotA/TolQ/ExbB proton channel [Planctomyces limnophilus DSM 3776]
Length = 324
Score = 89.1 bits (220), Expect = 4e-16, Method: Composition-based stats.
Identities = 36/212 (16%), Positives = 81/212 (38%), Gaps = 21/212 (9%)
Query: 16 LFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFW---SGQSLETV 72
+ G+ I+ + S + ++I+ + + +F + F + +
Sbjct: 100 MIRASGIFGFLIMLV----SFVMVALIMMLFLQIRKVNYIPADFVEDFEEKLNARDYPGA 155
Query: 73 CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKL 132
+ K+ + +A + + M+ + + ++ M E + +K+
Sbjct: 156 YELAKSDDSF-VARVLAAGMARLARGY-----------EEVENAMQEVGDDEALGMEQKI 203
Query: 133 SFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV--VSIPGIIESLISILLGLCVSI 190
+L + S ++G+LG V GM+ FQ IA GI +L + L GL V+I
Sbjct: 204 GYLALIGSVAPMLGLLGTVQGMVLSFQVIATSTQQPKPYELADGIATALFTTLEGLIVAI 263
Query: 191 PSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
P+ +A+ + +F + + + S
Sbjct: 264 PAIVAFTVYKNRFARFMFEASVISEGLMSRFS 295
>gi|169840466|ref|ZP_02873654.1| Biopolymer transport exbB protein [candidate division TM7
single-cell isolate TM7a]
Length = 102
Score = 89.1 bits (220), Expect = 4e-16, Method: Composition-based stats.
Identities = 27/93 (29%), Positives = 49/93 (52%)
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLIS 181
+ ++ + + LG++ + +G+LG V GM+ F +++ ++ + GI E+L +
Sbjct: 1 MAQTGKLEKGMWLLGAVVNTAPQLGLLGTVTGMITSFSALSASAESSKIVAAGISEALYT 60
Query: 182 ILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFA 214
GL V+IPS I YN F A++ME A
Sbjct: 61 TAFGLIVAIPSLIFYNYFNRRIDAIALEMERAA 93
>gi|189913257|ref|YP_001964486.1| Putative MotA/TolQ/ExbB proton channel protein [Leptospira biflexa
serovar Patoc strain 'Patoc 1 (Paris)']
gi|167781325|gb|ABZ99622.1| Putative MotA/TolQ/ExbB proton channel protein [Leptospira biflexa
serovar Patoc strain 'Patoc 1 (Paris)']
Length = 248
Score = 89.1 bits (220), Expect = 4e-16, Method: Composition-based stats.
Identities = 45/200 (22%), Positives = 87/200 (43%), Gaps = 15/200 (7%)
Query: 25 KCIITLLFIFSILSWSVIIQKSVNFIT-LRRQFREFEQLFW---SGQSLETVCKSLKNHH 80
K I ++ + SIL+ +V I++ + + ++ + L+ K L++H
Sbjct: 39 KIIFLVMLLASILAIAVFIERLIVYKRNFNKESESLLDSLTLLIRHRDLKGTEKLLESHP 98
Query: 81 NIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSS 140
F+ + E +K KG + +M+ I +E + E+L L ++ +
Sbjct: 99 MENSYTRFIHFVLEREKENHKG----------LSELMEGKILKEKLSLEERLPILNTLGN 148
Query: 141 AGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKF 199
+G+LG VLG++ F + ++ V + I +L++ GL V+IP +A N F
Sbjct: 149 NTPFIGLLGTVLGVIKAFYGLGTLGNSGAEVVMRSISTALLATAAGLAVAIPVVMANNYF 208
Query: 200 IEDSKKFAMQMEGFANEFSA 219
K Q+E + E A
Sbjct: 209 TRKMKLVIGQLEILSKEIHA 228
>gi|237751764|ref|ZP_04582244.1| biopolymer transporter [Helicobacter bilis ATCC 43879]
gi|229373130|gb|EEO23521.1| biopolymer transporter [Helicobacter bilis ATCC 43879]
Length = 207
Score = 89.1 bits (220), Expect = 4e-16, Method: Composition-based stats.
Identities = 25/87 (28%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI-AGYYSNNVVSIPGIIESLISILLGL 186
+ ++L+ + ++ S VG+LG V+G+M F SI A + + G+ +L + LGL
Sbjct: 55 LHKRLTLVATIGSNAPYVGLLGTVIGIMLTFTSIGANSMLDTKGIMVGLAMALRATALGL 114
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGF 213
V+IPS + YN + ++ + F
Sbjct: 115 VVAIPSIVFYNLLVRKAEVILTNWDIF 141
>gi|238926299|ref|ZP_04658059.1| MotA/TolQ/ExbB proton channel [Selenomonas flueggei ATCC 43531]
gi|238885979|gb|EEQ49617.1| MotA/TolQ/ExbB proton channel [Selenomonas flueggei ATCC 43531]
Length = 195
Score = 89.1 bits (220), Expect = 4e-16, Method: Composition-based stats.
Identities = 34/192 (17%), Positives = 70/192 (36%), Gaps = 10/192 (5%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAI 87
+ LL + S+ ++ + + + + + +E LET H I A
Sbjct: 1 MYLLLLCSLTVAAIAVDRFLLYRRAAQGAKE----------LETTVAESLRKHKIDEVAP 50
Query: 88 FMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGI 147
+ K A + + ++ + +L++L ++ + L+G+
Sbjct: 51 AVEGKDNMVAYFVKSALDARQAGEDVPMTLEGVYGEAAMLLRARLNYLSTIVTLAPLLGL 110
Query: 148 LGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFA 207
LG + GM+ F + GI E+L++ GL V+I S + + F +
Sbjct: 111 LGTISGMIQSFSIFNLQAGQPMAITGGIGEALVATATGLFVAIFSLVVHTYFAQRLDVML 170
Query: 208 MQMEGFANEFSA 219
+E N A
Sbjct: 171 TLLEKTMNTILA 182
>gi|171915622|ref|ZP_02931092.1| MotA/TolQ/ExbB proton channel family protein [Verrucomicrobium
spinosum DSM 4136]
Length = 267
Score = 89.1 bits (220), Expect = 4e-16, Method: Composition-based stats.
Identities = 35/218 (16%), Positives = 79/218 (36%), Gaps = 16/218 (7%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNF---ITLRRQFREFEQLFWSGQS 68
S+ ++ G + I + S+ + + ++ V + + F +
Sbjct: 52 SLMDVYKSGGPLMHFI----LLCSVGTIAAVVYCFVAVNPGRMMPKTSHHSMVQFARHRD 107
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMS-EWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + + + + + + + +++ D +DR +A
Sbjct: 108 VNAAYQLSEQNPSAYAKVVGPALLKVNFERDHANKGSMEQAAGDALDREETRQMAW---- 163
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLC 187
+++L ++ ++G+LG V GM+ F +A S GI E++I+ GL
Sbjct: 164 ----VNYLNVFATLAPMLGLLGTVTGMIASFDQLAAGRSEPADLAGGIGEAMITTAGGLF 219
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
V IP+ Y F +++ A ILS +
Sbjct: 220 VGIPAMFFYFFFKNRLTSIMSEVQKNAAFVIDILSGEV 257
>gi|149201979|ref|ZP_01878953.1| MotA/TolQ/ExbB proton channel [Roseovarius sp. TM1035]
gi|149145027|gb|EDM33056.1| MotA/TolQ/ExbB proton channel [Roseovarius sp. TM1035]
Length = 219
Score = 89.1 bits (220), Expect = 5e-16, Method: Composition-based stats.
Identities = 37/182 (20%), Positives = 71/182 (39%), Gaps = 18/182 (9%)
Query: 27 IITLLFIFSILSWSVIIQKSVNFITL---RRQFREFEQLFWSGQSLETVCKSLKNHHNIG 83
+I ++ + S+ + +VI+ K F R W + L +
Sbjct: 15 VIAMIAVLSVGTLAVILYKLWQFRASGVGRHHALRAAVTDWDHGETAAAHRRLATSRSYL 74
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
I + + + + R+M A AR + FL +++
Sbjct: 75 APVIARAFAVDPRDTVA------------TRRLMAEAEARF-ARLERGFRFLDTVAQVAP 121
Query: 144 LVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIE 201
L+G+ G VLGM+ FQ++ AG + + GI +L++ GL V++P+S+ + F
Sbjct: 122 LLGLFGTVLGMIEAFQALQSAGAQVDPSLLAGGIWVALLTTAAGLAVAMPASVVLSWFES 181
Query: 202 DS 203
Sbjct: 182 RM 183
>gi|189218835|ref|YP_001939476.1| biopolymer transport protein ExbB/TolQ [Methylacidiphilum
infernorum V4]
gi|189185693|gb|ACD82878.1| Biopolymer transport protein ExbB/TolQ [Methylacidiphilum
infernorum V4]
Length = 265
Score = 89.1 bits (220), Expect = 5e-16, Method: Composition-based stats.
Identities = 43/210 (20%), Positives = 82/210 (39%), Gaps = 19/210 (9%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFIT----LRRQFREFEQLFWSG 66
I++F L G +I LF S L ++I ++ + R E G
Sbjct: 28 ITVFDLLKSGGW----VIIPLFFISFLVVALIFYYFISIRISAVWTKDLDRRVENALRKG 83
Query: 67 QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
L V +++KN + G A + + K D S I + + +
Sbjct: 84 -DLSLVSEAIKNR-SEGCARLLKEVIGFLSKHKDADLHSVISVSEAFG-------SGFAS 134
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSN--NVVSIPGIIESLISILL 184
+ +++ +L ++G+ G V+G++ F SIA S ++ G+ ++L+S +
Sbjct: 135 LLNQRILYLLDAGVIAPMLGLFGTVVGILRSFGSIAAEPSPMRTLLLAGGVSQALVSTAI 194
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFA 214
GL V I + Y+ F + E +
Sbjct: 195 GLIVGITAMFFYSFFRGRVQYLISVFEERS 224
>gi|282880148|ref|ZP_06288868.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Prevotella timonensis CRIS 5C-B1]
gi|281306021|gb|EFA98061.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Prevotella timonensis CRIS 5C-B1]
Length = 273
Score = 89.1 bits (220), Expect = 5e-16, Method: Composition-based stats.
Identities = 38/213 (17%), Positives = 84/213 (39%), Gaps = 20/213 (9%)
Query: 9 MDISIFALFMQMGLAVKCIITLL---FIFSILSWSVIIQKSVNFIT------LRRQFREF 59
+++ + G V I LL S+ ++ + + +
Sbjct: 54 HPLNMLGTVYKGGWVVPIIFGLLCTVIAMSV-------ERLLAISACSGKGSVIKFTENV 106
Query: 60 EQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDV 119
+ +G + + L + +A + ++ + +++ + + I I D
Sbjct: 107 KAALRNG-DIAKA-EELCHKQKGSVANVVLADLKSYREMENSSIKLKEKINT-IQNSHDE 163
Query: 120 AIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIES 178
A A E+ +T L + ++ + G L + G VLGM+ F ++A + +++ GI E+
Sbjct: 164 ATALEMPTMTMNLPIIATVVTLGTLTALFGTVLGMIRSFAALAAGGGADSMALSTGISEA 223
Query: 179 LISILLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
L++ G+ S S ++YN F K M+
Sbjct: 224 LVNTASGIATSWVSVVSYNYFTNKIDKLTFAMD 256
>gi|331019436|gb|EGH99492.1| biopolymer transport protein ExbB [Pseudomonas syringae pv.
lachrymans str. M302278PT]
Length = 124
Score = 89.1 bits (220), Expect = 5e-16, Method: Composition-based stats.
Identities = 29/123 (23%), Positives = 54/123 (43%), Gaps = 5/123 (4%)
Query: 22 LAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHN 81
+ V ++ L +FS+LSW++++ KS ++ + Q ++F + FWS L T + +
Sbjct: 1 MIVPAVLWALIVFSVLSWALLLIKSAQYVRQKSQNKQFTKAFWSAPDLLTAAEHSAQYPG 60
Query: 82 IGLAAIFMSAMSEWK----KSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGS 137
LA I S + I DR++R + I +E + + L S
Sbjct: 61 -ALARIANSGFEAMAVDESPRTTQQLAHTINRSDRLERNLRQQIQKERRALESGQAILAS 119
Query: 138 MSS 140
+ S
Sbjct: 120 IGS 122
>gi|189912932|ref|YP_001964821.1| TolQ-like transport protein [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167777608|gb|ABZ95908.1| TolQ-like transport protein [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
Length = 219
Score = 89.1 bits (220), Expect = 5e-16, Method: Composition-based stats.
Identities = 45/200 (22%), Positives = 87/200 (43%), Gaps = 15/200 (7%)
Query: 25 KCIITLLFIFSILSWSVIIQKSVNFIT-LRRQFREFEQLFW---SGQSLETVCKSLKNHH 80
K I ++ + SIL+ +V I++ + + ++ + L+ K L++H
Sbjct: 10 KIIFLVMLLASILAIAVFIERLIVYKRNFNKESESLLDSLTLLIRHRDLKGTEKLLESHP 69
Query: 81 NIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSS 140
F+ + E +K KG + +M+ I +E + E+L L ++ +
Sbjct: 70 MENSYTRFIHFVLEREKENHKG----------LSELMEGKILKEKLSLEERLPILNTLGN 119
Query: 141 AGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKF 199
+G+LG VLG++ F + ++ V + I +L++ GL V+IP +A N F
Sbjct: 120 NTPFIGLLGTVLGVIKAFYGLGTLGNSGAEVVMRSISTALLATAAGLAVAIPVVMANNYF 179
Query: 200 IEDSKKFAMQMEGFANEFSA 219
K Q+E + E A
Sbjct: 180 TRKMKLVIGQLEILSKEIHA 199
>gi|209573890|gb|ACI62883.1| TonB system transport protein ExbB2 [Acidithiobacillus thiooxidans]
Length = 225
Score = 88.7 bits (219), Expect = 5e-16, Method: Composition-based stats.
Identities = 42/210 (20%), Positives = 89/210 (42%), Gaps = 21/210 (10%)
Query: 20 MGLAVKC-----IITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCK 74
+A K I+ +L + I+ W V I++ + + R G+ + + +
Sbjct: 7 ASIAAKSGGILYIMPVLLL--IVLW-VSIERFLFLSRMSRL----------GEKMASTLE 53
Query: 75 SLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQD--RIDRMMDVAIARELEEITEKL 132
L + L + SA ++ R P I+D ++ ++ A+ R++ + ++L
Sbjct: 54 QLPDIKEQSLRPLADSAEFPFRALLQIPIRFP-NIKDSAQLSEILQEAVMRQVPLLDKRL 112
Query: 133 SFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPS 192
L + + L+G+LG ++GM FQ + SN + E+L++ GL ++I
Sbjct: 113 WLLDTTVTLAPLLGLLGTIIGMFHAFQILNNVASNPTAITGSVAEALMATAAGLVIAIIG 172
Query: 193 SIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
+++N + QME + +S
Sbjct: 173 LVSFNGLQNQMRFVVHQMETLRSMLINRMS 202
>gi|283781940|ref|YP_003372695.1| MotA/TolQ/ExbB proton channel [Pirellula staleyi DSM 6068]
gi|283440393|gb|ADB18835.1| MotA/TolQ/ExbB proton channel [Pirellula staleyi DSM 6068]
Length = 277
Score = 88.7 bits (219), Expect = 5e-16, Method: Composition-based stats.
Identities = 46/195 (23%), Positives = 88/195 (45%), Gaps = 18/195 (9%)
Query: 32 FIFSILSWSVIIQKSVNFITLRRQF---REFEQLFWSGQSLETVCKS--LKNHHNIGLAA 86
F +LS++ + +N + LRR + + F + + + ++ L + L
Sbjct: 86 IAFFVLSFTFVAVLVMNMLALRRDAIVPKSLAEAFEANLNEKKFQEAFDLAKADDSFLGQ 145
Query: 87 IFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVG 146
+ + MS+ ++ DK M E+ ++ ++LS +G + S +VG
Sbjct: 146 MLAAGMSKLQQGYDKA-----------TTAMGQVAEEEIMKLEQRLSLIGLVGSISPMVG 194
Query: 147 ILGAVLGMMGFFQSIAGYYSNNVVS--IPGIIESLISILLGLCVSIPSSIAYNKFIEDSK 204
+LG V GM+ FQ IA + S GI +LI+ L+GL ++IP++IA+ F
Sbjct: 195 LLGTVDGMVASFQVIAMSGATPKASDLAEGISMALITTLVGLVLAIPATIAFALFKNRLS 254
Query: 205 KFAMQMEGFANEFSA 219
K ++ A+ +
Sbjct: 255 KLTQELGVQADNLMS 269
>gi|325282819|ref|YP_004255360.1| MotA/TolQ/ExbB proton channel [Deinococcus proteolyticus MRP]
gi|324314628|gb|ADY25743.1| MotA/TolQ/ExbB proton channel [Deinococcus proteolyticus MRP]
Length = 231
Score = 88.7 bits (219), Expect = 5e-16, Method: Composition-based stats.
Identities = 38/215 (17%), Positives = 74/215 (34%), Gaps = 20/215 (9%)
Query: 14 FALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQ----FREFEQLFWSGQSL 69
L G + ++ S+ + ++ L +
Sbjct: 1 MQLIQAAGP----VFYVIVALSVYVLFLTFARAQTLARLGQDPTALIERARATTAESGPA 56
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+ + H A + + +S ++ + M+ A+ E I
Sbjct: 57 AALAELDYAGHGSPAANVMRAGLSRAERGPQAA-----------EAAMNSALLAEDSRIY 105
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYS-NNVVSIPGIIESLISILLGLCV 188
L+ LG+ + L+G+LG V+GM+ F + + GI E+LI+ GL V
Sbjct: 106 AGLNALGTAAQIAPLLGLLGTVIGMVRSFLVFSAASNPTPAELGQGISEALINTAGGLVV 165
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
+I + +A N + + A E E + L+R
Sbjct: 166 AILAYLARNALRAQADRIATAAERVREEVPSWLTR 200
>gi|331000080|ref|ZP_08323775.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Parasutterella excrementihominis YIT 11859]
gi|329572964|gb|EGG54584.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Parasutterella excrementihominis YIT 11859]
Length = 213
Score = 88.7 bits (219), Expect = 6e-16, Method: Composition-based stats.
Identities = 38/193 (19%), Positives = 82/193 (42%), Gaps = 14/193 (7%)
Query: 29 TLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIF 88
L + I + + + NF+ LR +F+Q F + + + F
Sbjct: 15 IALVVIGIFALYITV---WNFLYLRGVLSKFKQHF----------RGMDKVTPERIRRYF 61
Query: 89 MSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGIL 148
+ + + + D I + + + + L++L +S+ L+G+L
Sbjct: 62 GESTNPLECIVRDIVMTHGAHSDDIRAEVAYLFHKHFKPVNNALTWLKLISAVSPLLGLL 121
Query: 149 GAVLGMMGFFQSIAGYYSNN-VVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFA 207
G V+GM+ F++I+ S + + GI +LI+ ++GL V+IP+ +AY + K+
Sbjct: 122 GTVIGMVTVFRTISENVSPDPTMLAGGIWTALITTVMGLVVAIPALMAYYYLMLKVKELR 181
Query: 208 MQMEGFANEFSAI 220
++ ++ I
Sbjct: 182 IEAVEYSYRALNI 194
>gi|150026241|ref|YP_001297067.1| biopolymer transport ExbB protein [Flavobacterium psychrophilum
JIP02/86]
gi|149772782|emb|CAL44266.1| Biopolymer transport ExbB protein [Flavobacterium psychrophilum
JIP02/86]
Length = 272
Score = 88.7 bits (219), Expect = 6e-16, Method: Composition-based stats.
Identities = 38/215 (17%), Positives = 82/215 (38%), Gaps = 12/215 (5%)
Query: 15 ALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITL--RRQFREFEQLFWSG---QSL 69
A+ G V ++ L + ++ I++ + + F + + +
Sbjct: 58 AMVYNGGPIVP-VLMGLLLMVVV---FGIERFMVISKAAGKGNLDAFMKKVQASVTSGDI 113
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+ + +A + + +++ +G S + I + ++ + E+ +
Sbjct: 114 DGAIDACDKQKGS-VANTIKAGLVKYQAVKAEGFSSEDAT-ETIHKEIEEVTSLEMPMLE 171
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV-SIPGIIESLISILLGLCV 188
+ L+ + ++ S G L G+LG V GM+ F +AG + GI E+LI+ G+
Sbjct: 172 KNLTIISTLVSLGTLAGLLGTVTGMIKAFAGLAGGGGADSAELANGISEALINTATGIST 231
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
S + I YN F ++ AN R
Sbjct: 232 SALAIIVYNFFTSKIDTLTYSIDEAANTIVNTYRR 266
>gi|254446109|ref|ZP_05059585.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Verrucomicrobiae bacterium DG1235]
gi|198260417|gb|EDY84725.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Verrucomicrobiae bacterium DG1235]
Length = 228
Score = 88.7 bits (219), Expect = 6e-16, Method: Composition-based stats.
Identities = 40/205 (19%), Positives = 72/205 (35%), Gaps = 29/205 (14%)
Query: 15 ALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCK 74
LF G+ V L S++ VI ++ + + S E +
Sbjct: 46 DLFRDAGIFV----YPLLACSLVGVFVICERFFSLRS-------------SAVLPEELVD 88
Query: 75 SLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSF 134
SA K K ++ E+ + L F
Sbjct: 89 EAGEGRRGDGEH--SSAFGRILKYWRKHEADVGAVKAYAR--------LEVNRMERGLVF 138
Query: 135 LGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN--VVSIPGIIESLISILLGLCVSIPS 192
L + A L+G+LG V G++ F +++ + GI ++ + ++GL V+IP
Sbjct: 139 LEIVVGAAPLLGLLGTVTGLVTVFGNVSLDTGLPEPALFTKGIAMAMTTTVMGLTVAIPC 198
Query: 193 SIAYNKFIEDSKKFAMQMEGFANEF 217
IA + F + FA+Q+E +
Sbjct: 199 LIANSYFQRRVETFAVQIESLLEQL 223
>gi|296272106|ref|YP_003654737.1| MotA/TolQ/ExbB proton channel [Arcobacter nitrofigilis DSM 7299]
gi|296096281|gb|ADG92231.1| MotA/TolQ/ExbB proton channel [Arcobacter nitrofigilis DSM 7299]
Length = 437
Score = 88.3 bits (218), Expect = 7e-16, Method: Composition-based stats.
Identities = 30/102 (29%), Positives = 53/102 (51%), Gaps = 1/102 (0%)
Query: 119 VAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-VVSIPGIIE 177
AI +E +I + SF+ +++ L+G+LG V GM+ FQ+I + + + + GI
Sbjct: 332 QAILKETTQIKKGQSFVKLLAAVTPLLGLLGTVTGMIATFQAITLFGTGDPKLMAGGIST 391
Query: 178 SLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
+LI+ +LGL +IP AY S++ +E + A
Sbjct: 392 ALITTVLGLVTAIPLLFAYTYISSKSEELVSILEEQSIGLLA 433
>gi|292669418|ref|ZP_06602844.1| MotA/TolQ/ExbB proton channel [Selenomonas noxia ATCC 43541]
gi|292648939|gb|EFF66911.1| MotA/TolQ/ExbB proton channel [Selenomonas noxia ATCC 43541]
Length = 212
Score = 88.3 bits (218), Expect = 7e-16, Method: Composition-based stats.
Identities = 34/193 (17%), Positives = 68/193 (35%), Gaps = 10/193 (5%)
Query: 27 IITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAA 86
I+ LL + S+ ++ I + + + + LE + I A
Sbjct: 17 IMYLLLLCSLTVAAIAIDRFLLYRRAAQ----------GASGLEADISAALRKRKIDEVA 66
Query: 87 IFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVG 146
+ + A + + +D A + +L++L + + L+G
Sbjct: 67 PAVEGKDNMVAYLVRSALDARAAGEDVPMTLDAAYGEAAMLLRARLNYLSMLVTLAPLLG 126
Query: 147 ILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKF 206
+LG + GM+ F + GI E+LI+ GL V+I + + + F +
Sbjct: 127 LLGTISGMIQSFSIFNLQAGQPMAITGGIGEALIATATGLFVAIFALVVHTYFAQRMDTM 186
Query: 207 AMQMEGFANEFSA 219
+E N A
Sbjct: 187 LTLLEKTMNTLLA 199
>gi|330720938|gb|EGG99112.1| MotA/TolQ/ExbB proton channel family protein [gamma proteobacterium
IMCC2047]
Length = 465
Score = 88.3 bits (218), Expect = 7e-16, Method: Composition-based stats.
Identities = 32/181 (17%), Positives = 72/181 (39%), Gaps = 24/181 (13%)
Query: 40 SVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSC 99
++ + + + ++RR+ + + + + L + + E
Sbjct: 299 TLAVWRFIVLSSVRRKVEK------------QLQSPQQASADNPLGRVLL-MYQEHIALP 345
Query: 100 DKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQ 159
+ ++ + AI RE+ + + ++ + + L+G+LG V GM+ FQ
Sbjct: 346 ----------VEALELKLHEAILREIPPLEKWVNVIKLSAMVAPLLGLLGTVSGMILTFQ 395
Query: 160 SIAGYYSNN-VVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFS 218
++ + + + GI +L++ LGLCV+IP+ + SK +E A
Sbjct: 396 ALTIFGAGDPKAMAGGISSALVTTALGLCVAIPAIFLHALVSSRSKNIVQVLEEQAAGVI 455
Query: 219 A 219
A
Sbjct: 456 A 456
>gi|254443212|ref|ZP_05056688.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Verrucomicrobiae bacterium DG1235]
gi|198257520|gb|EDY81828.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Verrucomicrobiae bacterium DG1235]
Length = 219
Score = 88.3 bits (218), Expect = 8e-16, Method: Composition-based stats.
Identities = 34/200 (17%), Positives = 82/200 (41%), Gaps = 15/200 (7%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLK--NHHNIGLA 85
+ LF S+++ V +++ + + + +EF + S + ++L A
Sbjct: 1 MWPLFALSLVALVVFVERLLFLHRNQIRSKEFLSGIENSLSKGRLIEALTICQDTPGPAA 60
Query: 86 AIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLV 145
A+ + + ++++ I ++ A EL + ++ L +++ +
Sbjct: 61 AMVKAGLMSFRENNAV-----------IREVVREAAVVELAPVKRRVGALYAIAQVAPIF 109
Query: 146 GILGAVLGMMGFFQSIAGYYSNNVV--SIPGIIESLISILLGLCVSIPSSIAYNKFIEDS 203
G+LG V+GM+ F G ++LIS GL ++ + +A++ +
Sbjct: 110 GLLGTVIGMIDSFLQYEQQGVYVHAGHLAGGGWQALISTATGLALAAVAIMAHHFLVGRI 169
Query: 204 KKFAMQMEGFANEFSAILSR 223
+ ++M+ A E I +R
Sbjct: 170 RTVVLEMDWLAQELVVIFTR 189
>gi|254443026|ref|ZP_05056502.1| transporter, MotA/TolQ/ExbB proton channel family, putative
[Verrucomicrobiae bacterium DG1235]
gi|198257334|gb|EDY81642.1| transporter, MotA/TolQ/ExbB proton channel family, putative
[Verrucomicrobiae bacterium DG1235]
Length = 167
Score = 88.3 bits (218), Expect = 8e-16, Method: Composition-based stats.
Identities = 32/157 (20%), Positives = 64/157 (40%), Gaps = 14/157 (8%)
Query: 61 QLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVA 120
+ W E + K L N ++ + S + K DR+ +
Sbjct: 5 KNLWEAAQFEELAK-LAEGRNCVMSRVLSSIIKHRSKPF-----------DRVSMIASNT 52
Query: 121 IARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFF--QSIAGYYSNNVVSIPGIIES 178
+ ++ +++ L +++ L+G+ G V GM+ F I G + + GI ++
Sbjct: 53 ASSAMKRELQRIYPLNIIATLSPLIGLFGTVAGMITSFRMIVITGVSGDATIVADGISQA 112
Query: 179 LISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFAN 215
L++ GL V IP+ Y+ F +F+ +E +N
Sbjct: 113 LVTTAAGLIVGIPTLAFYHYFKNRLSRFSSVIEDNSN 149
>gi|170522212|gb|ACB20384.1| TtpC [Vibrio alginolyticus]
Length = 454
Score = 88.3 bits (218), Expect = 8e-16, Method: Composition-based stats.
Identities = 26/110 (23%), Positives = 54/110 (49%), Gaps = 1/110 (0%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-V 169
+ ++ + A+ E + + LS L +++ ++G+LG V GM+ FQ I + + +
Sbjct: 323 EALELRLLEAVVDEQTHLEKGLSMLKLLAALAPMLGLLGTVTGMIETFQVITQFGNGDPK 382
Query: 170 VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
V GI +L++ +LGL ++P +A+N ++ +E A
Sbjct: 383 VMAGGISMALVTTVLGLVSAMPLLLAHNVLSSQAENIRSILEKQGIGLVA 432
>gi|303257948|ref|ZP_07343957.1| MotA/TolQ/ExbB proton channel family protein [Burkholderiales
bacterium 1_1_47]
gi|302859291|gb|EFL82373.1| MotA/TolQ/ExbB proton channel family protein [Burkholderiales
bacterium 1_1_47]
Length = 213
Score = 88.3 bits (218), Expect = 8e-16, Method: Composition-based stats.
Identities = 36/193 (18%), Positives = 80/193 (41%), Gaps = 14/193 (7%)
Query: 29 TLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIF 88
L + + + + NF+ LR F++ F + ++ F
Sbjct: 15 IALVVIGFFALYITV---WNFLYLRGVLSRFKKHF----------HGMDKATPERISRFF 61
Query: 89 MSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGIL 148
+ + + + D I + + + + L++L +S+ L+G+L
Sbjct: 62 GESTNPLECIVRDIVMTHGAHSDDIRAEVAYLFHKHFKPVNNALTWLKLISAVSPLLGLL 121
Query: 149 GAVLGMMGFFQSIAGYYSNN-VVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFA 207
G V+GM+ F++I+ S + + GI +LI+ ++GL V+IP+ +AY + K+
Sbjct: 122 GTVVGMVTVFRTISENVSPDPTMLAGGIWTALITTVMGLVVAIPALMAYYYLMLKVKELR 181
Query: 208 MQMEGFANEFSAI 220
++ ++ I
Sbjct: 182 IEAVEYSYRALNI 194
>gi|48374171|gb|AAT41883.1| putative biopolymer transport protein [Fremyella diplosiphon Fd33]
Length = 217
Score = 88.3 bits (218), Expect = 8e-16, Method: Composition-based stats.
Identities = 37/222 (16%), Positives = 88/222 (39%), Gaps = 21/222 (9%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+ I LF G+ ++ L FS+++ ++I+++ + + + + + + ++
Sbjct: 1 MGIKNLFAAGGV----VMWPLLAFSVVALALIVERVRFWYRVNTRQAKVVREILNLYRMD 56
Query: 71 T---VCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + + N+ + IF++A + ++ EL
Sbjct: 57 NVVGAIEKSRQNANLPIPRIFLAA-----------LELEEPTPEEFRLALESEAQAELPI 105
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGY---YSNNVVSIPGIIESLISILL 184
I + ++ L G+LG VLG++ F S+ + GI E+L+S
Sbjct: 106 IKRFNTIFDTIIGLSPLFGLLGTVLGLIVSFASLNLGDVGGTKTAGVTSGISEALVSTAS 165
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
GL V+I + N F +++ ++ + + + R+ E
Sbjct: 166 GLIVAIFTLFFANSFRGLAQRQTGLIQEYGGQLELLYRRRYE 207
>gi|108761712|ref|YP_634979.1| MotA/TolQ/ExbB proton channel family protein [Myxococcus xanthus DK
1622]
gi|27804855|gb|AAO22892.1| adventurous gliding motility protein R [Myxococcus xanthus]
gi|108465592|gb|ABF90777.1| MotA/TolQ/ExbB proton channel family protein [Myxococcus xanthus DK
1622]
Length = 245
Score = 88.3 bits (218), Expect = 8e-16, Method: Composition-based stats.
Identities = 30/205 (14%), Positives = 79/205 (38%), Gaps = 17/205 (8%)
Query: 28 ITLLFIFSILSWSVIIQKSV-NFITLRRQFREFEQLFWS---GQSLETVCKSLKNHHNIG 83
+ + I++ ++++++S+ F F + L+ + +
Sbjct: 37 MYPIAACLIVALAIMVERSIILFGKASINKEAFLRGLKKHIYAGDLDKAINYVAGQKSTP 96
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
L + + + + D + +D A RE +I + +L + +A +
Sbjct: 97 LTNVIKAGL-----------MNVPKGNDEVQAALDEASLRETPKIEARTGYLAMLGNAAM 145
Query: 144 LVGILGAVLGMMGFFQSIAGYYSNNVVS--IPGIIESLISILLGLCVSIPSSIAYNKFIE 201
L G+LG V G++ F+++A + + GI E++ GL +IP+ I+++
Sbjct: 146 LAGLLGTVSGLIACFEAVANVNPADKAAILAIGISEAMNCTGFGLLTAIPALISFSVLTG 205
Query: 202 DSKKFAMQMEGFANEFSAILSRQTE 226
++ + + ++ +
Sbjct: 206 RTQSLINDINETSVSVLNLIVANKD 230
>gi|104780768|ref|YP_607266.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Pseudomonas entomophila L48]
gi|95109755|emb|CAK14460.1| putative transporter, MotA/TolQ/ExbB proton channel family protein
[Pseudomonas entomophila L48]
Length = 201
Score = 87.9 bits (217), Expect = 8e-16, Method: Composition-based stats.
Identities = 39/207 (18%), Positives = 86/207 (41%), Gaps = 15/207 (7%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV-CKSLKN-HHNIGLA 85
+ + + SI + ++++++ R W + + LK + L
Sbjct: 2 MLPIILSSIAAMAIVVERLWTLRASRVTPPHLLGQVWMWIKDKQLTSDKLKALRADSPLG 61
Query: 86 AIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLV 145
I + ++ + + + ++ A +R + E+ +S LG++++ L+
Sbjct: 62 EILAAGLANSRHGR-----------EIMKECIEEAASRVIHELERYISTLGTIAAMAPLL 110
Query: 146 GILGAVLGMMGFFQSIAGYY--SNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDS 203
G+LG VLGM+ F + G +N V GI ++L++ GL V IP+ + +
Sbjct: 111 GLLGTVLGMIDIFSAFMGSQMTANAAVLAGGISKALVTTAAGLMVGIPAVFFHRFLLRRI 170
Query: 204 KKFAMQMEGFANEFSAILSRQTEGNIS 230
+ + ME A + +L E ++
Sbjct: 171 DELVVGMEQEAIKLVEVLQGDREVEVA 197
>gi|89095500|ref|ZP_01168408.1| MotA/TolQ/ExbB proton channel [Oceanospirillum sp. MED92]
gi|89080247|gb|EAR59511.1| MotA/TolQ/ExbB proton channel [Oceanospirillum sp. MED92]
Length = 460
Score = 87.9 bits (217), Expect = 8e-16, Method: Composition-based stats.
Identities = 27/110 (24%), Positives = 62/110 (56%), Gaps = 1/110 (0%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-V 169
++++ +D +I +E+ +I S + +++ L+G+LG V+GM+ FQSI + +++
Sbjct: 330 EQLELKVDESILKEVPKIERGQSIIKLLAAVAPLLGLLGTVIGMIATFQSITLFGTSDPK 389
Query: 170 VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
+ GI ++L++ +LGL V+IP ++ S++ ++ + A
Sbjct: 390 LMAGGISQALMTTVLGLVVAIPLLFCHSYLSSRSRRITQVLQEKSLGLLA 439
>gi|91228114|ref|ZP_01262156.1| biopolymer transport protein ExbB-related protein [Vibrio
alginolyticus 12G01]
gi|91188232|gb|EAS74532.1| biopolymer transport protein ExbB-related protein [Vibrio
alginolyticus 12G01]
Length = 455
Score = 87.9 bits (217), Expect = 9e-16, Method: Composition-based stats.
Identities = 26/110 (23%), Positives = 54/110 (49%), Gaps = 1/110 (0%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-V 169
+ ++ + A+ E + + LS L +++ ++G+LG V GM+ FQ I + + +
Sbjct: 324 EALELRLLEAVVDEQTHLEKGLSMLKLLAALAPMLGLLGTVTGMIETFQVITQFGNGDPK 383
Query: 170 VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
V GI +L++ +LGL ++P +A+N ++ +E A
Sbjct: 384 VMAGGISMALVTTVLGLVSAMPLLLAHNVLSSQAENIRSILEKQGIGLVA 433
>gi|269798813|ref|YP_003312713.1| MotA/TolQ/ExbB proton channel [Veillonella parvula DSM 2008]
gi|269095442|gb|ACZ25433.1| MotA/TolQ/ExbB proton channel [Veillonella parvula DSM 2008]
Length = 201
Score = 87.9 bits (217), Expect = 9e-16, Method: Composition-based stats.
Identities = 40/200 (20%), Positives = 79/200 (39%), Gaps = 17/200 (8%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLET 71
SI LF G ++ L IF + + + I++ + + R F ++ QS
Sbjct: 3 SIAHLFAAGGF----VMYPLVIFLLFTLMIGIERIFLYRKFTKDLRRFNKVLEKNQSWIM 58
Query: 72 VCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEK 131
+ L+ L ++F A+ K ++ + ++ E +
Sbjct: 59 LPSVLERDTEE-LGSLFARAIRSAKNYN------------GLENRLQDVVSYADERLKRG 105
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIP 191
LS+L + + L+G+LG VLGM+ F + G + G+ E+L++ GL V+I
Sbjct: 106 LSWLSMIVTMAPLLGLLGTVLGMIRAFAVVGGDIGAPTIITGGVSEALVATATGLTVAII 165
Query: 192 SSIAYNKFIEDSKKFAMQME 211
+ ++ +E
Sbjct: 166 ALGFHSYCAAKVNDSVATLE 185
>gi|261253062|ref|ZP_05945635.1| MotA/TolQ/ExbB proton channel family protein [Vibrio orientalis CIP
102891]
gi|260936453|gb|EEX92442.1| MotA/TolQ/ExbB proton channel family protein [Vibrio orientalis CIP
102891]
Length = 451
Score = 87.9 bits (217), Expect = 9e-16, Method: Composition-based stats.
Identities = 26/110 (23%), Positives = 54/110 (49%), Gaps = 1/110 (0%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-V 169
+ ++ + A+ E + + LS L +++ ++G+LG V GM+ FQ I + + +
Sbjct: 324 EALELRLLEAVVDEQTGLEKGLSMLKLLAALAPMLGLLGTVTGMIETFQVITQFGNGDPK 383
Query: 170 VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
V GI +L++ +LGL ++P +A+N ++ +E A
Sbjct: 384 VMAGGISMALVTTVLGLIAAMPLLLAHNILSSQAESIRHILEKQGIGLVA 433
>gi|167949014|ref|ZP_02536088.1| MotA/TolQ/ExbB proton channel [Endoriftia persephone
'Hot96_1+Hot96_2']
Length = 244
Score = 87.9 bits (217), Expect = 9e-16, Method: Composition-based stats.
Identities = 39/204 (19%), Positives = 85/204 (41%), Gaps = 26/204 (12%)
Query: 26 CIITLLFIF-SILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGL 84
+I L I ++ V+I++ L R+ + +L ++ ++ +G
Sbjct: 62 GVIGYLIIALGVVGLLVVIERLAVLGLLGRRMKRQLKL-----------EAPGGNNPLGR 110
Query: 85 AAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLL 144
+S +E + + +D AI +E+ + L +G +++ L
Sbjct: 111 VRQAVSGEAEVDA-------------ETLQLRLDEAILKEIPRLRRGLPLVGILAAVAPL 157
Query: 145 VGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDS 203
+G+LG V GM+ FQSI + + + + GI ++L++ LGL +IP + ++ S
Sbjct: 158 LGLLGTVTGMIETFQSITLFGAGDPRLMSGGISQALVTTELGLAAAIPLVLLHSFMSGRS 217
Query: 204 KKFAMQMEGFANEFSAILSRQTEG 227
+ ++ + A + G
Sbjct: 218 NRLIQILDEQSAAMVAERAESRHG 241
>gi|269966637|ref|ZP_06180717.1| biopolymer transport protein ExbB-related protein [Vibrio
alginolyticus 40B]
gi|269828759|gb|EEZ83013.1| biopolymer transport protein ExbB-related protein [Vibrio
alginolyticus 40B]
Length = 455
Score = 87.9 bits (217), Expect = 9e-16, Method: Composition-based stats.
Identities = 26/110 (23%), Positives = 54/110 (49%), Gaps = 1/110 (0%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-V 169
+ ++ + A+ E + + LS L +++ ++G+LG V GM+ FQ I + + +
Sbjct: 324 EALELRLLEAVVDEQTHLEKGLSMLKLLAALAPMLGLLGTVTGMIETFQVITQFGNGDPK 383
Query: 170 VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
V GI +L++ +LGL ++P +A+N ++ +E A
Sbjct: 384 VMAGGISMALVTTVLGLVSAMPLLLAHNVLSSQAENIRSILEKQGIGLVA 433
>gi|90022599|ref|YP_528426.1| biopolymer transport proteins-like protein [Saccharophagus
degradans 2-40]
gi|89952199|gb|ABD82214.1| MotA/TolQ/ExbB proton channel [Saccharophagus degradans 2-40]
Length = 242
Score = 87.9 bits (217), Expect = 1e-15, Method: Composition-based stats.
Identities = 34/209 (16%), Positives = 78/209 (37%), Gaps = 19/209 (9%)
Query: 29 TLLFIFSILSWSVIIQKSVNFITLR-RQFREFEQLF--WSGQSLETVCKSLKNHHNIGLA 85
L + + ++ ++ R R + FE ++ + +
Sbjct: 22 IGLVLA--VGLAIAFERWAFLTRERIRNIKAFESFLPLLRTTDMDK-MQLYTRESQAPVT 78
Query: 86 AIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLV 145
I + S + I+ M+ + + + E+ S+L +++ L+
Sbjct: 79 RIIACGLDMMTVSKQRAD---------IENAMNEGMLETMPRLEERTSYLAVLANIATLL 129
Query: 146 GILGAVLGMMGFFQSIAGY--YSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDS 203
G+LG ++G++G F ++A + + I ++ + GL +IP I ++ +
Sbjct: 130 GLLGTIIGLIGAFTAVAQADPAQKSELLSSSISVAMNTTAFGLIAAIPLLILHSVLQSKT 189
Query: 204 KKFAMQMEGFANEFSAI--LSRQTEGNIS 230
K +E A +F I + R E I+
Sbjct: 190 AKIVRSIEMSAVKFLNIMTMHRLIEAGIT 218
>gi|254227866|ref|ZP_04921296.1| Biopolymer transport proteins [Vibrio sp. Ex25]
gi|262396145|ref|YP_003287998.1| MotA/TolQ/ExbB proton channel family protein [Vibrio sp. Ex25]
gi|151939362|gb|EDN58190.1| Biopolymer transport proteins [Vibrio sp. Ex25]
gi|262339739|gb|ACY53533.1| MotA/TolQ/ExbB proton channel family protein [Vibrio sp. Ex25]
Length = 455
Score = 87.9 bits (217), Expect = 1e-15, Method: Composition-based stats.
Identities = 26/110 (23%), Positives = 54/110 (49%), Gaps = 1/110 (0%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-V 169
+ ++ + A+ E + + LS L +++ ++G+LG V GM+ FQ I + + +
Sbjct: 324 EALELRLLEAVVDEQTHLEKGLSMLKLLAALAPMLGLLGTVTGMIETFQVITQFGNGDPK 383
Query: 170 VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
V GI +L++ +LGL ++P +A+N ++ +E A
Sbjct: 384 VMAGGISMALVTTVLGLVSAMPLLLAHNVLSSQAENIRSILEKQGIGLVA 433
>gi|158333399|ref|YP_001514571.1| biopolymer transport protein ExbB like [Acaryochloris marina
MBIC11017]
gi|158303640|gb|ABW25257.1| biopolymer transport protein ExbB like, putative [Acaryochloris
marina MBIC11017]
Length = 235
Score = 87.9 bits (217), Expect = 1e-15, Method: Composition-based stats.
Identities = 32/205 (15%), Positives = 77/205 (37%), Gaps = 18/205 (8%)
Query: 27 IITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ--SLETVCKSLKNHHNIGL 84
++ + S+L+ + ++++ +I L Q SLE ++ + +
Sbjct: 14 VMIPIAGLSVLTLACAFERTIFWIRLISQEHRIVHDVLDAARCSLEEAEAIAQHARFLPI 73
Query: 85 AAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLL 144
++ + + S + ++ A +E + + L + + L
Sbjct: 74 GRFLLAPLRLHQPSP-----------ETFRLALEAAADKEFVRMRKGDKLLETTVAVAPL 122
Query: 145 VGILGAVLGMMGFFQSI----AGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFI 200
+G+LG V G++ F ++ G + GI E+L++ G+ V+I + I F+
Sbjct: 123 MGLLGTVTGLINTFNNLNIGSGGTSEQATKAAAGIGEALLTTAAGMVVAILALIVLRIFV 182
Query: 201 EDSKKFAMQMEGFANEFSAILSRQT 225
+ +E ++ RQ
Sbjct: 183 ILQARQVDTFSEVGSE-MELIYRQV 206
>gi|302325682|gb|ADL24883.1| MotA/TolQ/ExbB proton channel family protein [Fibrobacter
succinogenes subsp. succinogenes S85]
Length = 200
Score = 87.9 bits (217), Expect = 1e-15, Method: Composition-based stats.
Identities = 36/195 (18%), Positives = 78/195 (40%), Gaps = 18/195 (9%)
Query: 14 FALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRR-QFREFEQLFWSGQSLETV 72
++ ++ G ++ LF+ L W ++ ++ + L+ +F + + E
Sbjct: 1 MSILLRGGW----VLLPLFLIGWLGWFLMFERYGYYFMLKGTSTSKFFKDLDTVGE-EAA 55
Query: 73 CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKL 132
L+ F++ + +K + G + + M +++ L
Sbjct: 56 FAKLRKRRFG----YFLALVENVRKYRNDGPVA-------VRNAMLATRHELDVSLSKSL 104
Query: 133 SFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYY-SNNVVSIPGIIESLISILLGLCVSIP 191
+ + +S L+G+LG V GM+ F++I + N V+ GI E+L++ GL V+ P
Sbjct: 105 KTIVTCASIAPLLGLLGTVSGMVHTFETIKQFGFGNPVLLADGISEALLTTQAGLLVAFP 164
Query: 192 SSIAYNKFIEDSKKF 206
+ YN
Sbjct: 165 LMLVYNYLESRVDSI 179
>gi|87309304|ref|ZP_01091440.1| probable tolQ protein [Blastopirellula marina DSM 3645]
gi|87287943|gb|EAQ79841.1| probable tolQ protein [Blastopirellula marina DSM 3645]
Length = 278
Score = 87.9 bits (217), Expect = 1e-15, Method: Composition-based stats.
Identities = 27/114 (23%), Positives = 52/114 (45%), Gaps = 2/114 (1%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYS--NN 168
D+ M E ++ +LS+L + S ++G+ G V GM+ F IA S N
Sbjct: 160 DKALEAMQEVGEEENMKLDHRLSYLALIGSLSPMIGLFGTVDGMIRAFSVIALGGSTPNP 219
Query: 169 VVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
GI +L++ L+GL ++IP+ +Y+ + A+++ + +
Sbjct: 220 AQLAEGISTALMTTLVGLAIAIPAIASYSILRNRVDRLALEVGITSEGLMSRFQ 273
>gi|254787623|ref|YP_003075052.1| ATPase [Teredinibacter turnerae T7901]
gi|237685803|gb|ACR13067.1| ATPase [Teredinibacter turnerae T7901]
Length = 245
Score = 87.9 bits (217), Expect = 1e-15, Method: Composition-based stats.
Identities = 23/205 (11%), Positives = 80/205 (39%), Gaps = 19/205 (9%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQL---FWSGQS 68
++ F G + I +L ++ ++ +++ + T + R +
Sbjct: 27 TVVNFFQSGGPFMYPIALVL----VVGLALAVERWLFLTTAKASNRRTFNRILPLLQKKD 82
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
++ + + + I + ++ +++ + + ++ M+ + + +
Sbjct: 83 FASIVE-IARQSKAPVGRIVAAGIARLQQTPRR---------EEVEFAMEEGVMEAVPRL 132
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV--SIPGIIESLISILLGL 186
++ +L ++++ L+G+LG ++G++ F ++A I ++ + GL
Sbjct: 133 EKRTPYLATLANIATLLGLLGTIMGLIAAFTAVANADPAEKANLLSQSISVAMNTTAFGL 192
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQME 211
+IP +A+ + + +E
Sbjct: 193 MSAIPLLLAHAMLQSKTTEIIDSLE 217
>gi|170720695|ref|YP_001748383.1| MotA/TolQ/ExbB proton channel [Pseudomonas putida W619]
gi|169758698|gb|ACA72014.1| MotA/TolQ/ExbB proton channel [Pseudomonas putida W619]
Length = 211
Score = 87.9 bits (217), Expect = 1e-15, Method: Composition-based stats.
Identities = 39/222 (17%), Positives = 89/222 (40%), Gaps = 19/222 (8%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
++ L G + + + SI + +++ ++ R W + +
Sbjct: 1 MWELVKSGGWM----MLPIILSSIAAMAIVAERLWTLRASRVTPPHLLGQVWMWIKDKQL 56
Query: 73 -CKSLKN-HHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
LK + L I + ++ + + + ++ + +R + E+
Sbjct: 57 TSDKLKALRADSPLGEILAAGLANSRHGR-----------EIMKECIEESASRVIHELER 105
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYY--SNNVVSIPGIIESLISILLGLCV 188
+S LG++++ L+G+LG VLGM+ F + G +N V GI ++L++ GL V
Sbjct: 106 YISTLGTIAAMAPLLGLLGTVLGMIDIFSAFMGSQMTANAAVLASGISKALVTTAAGLMV 165
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
IP+ + + + + ME A + ++ E ++
Sbjct: 166 GIPAVFFHRFLLRRIDELVVGMEQEAIKLVEVIQGDREVEVA 207
>gi|259416881|ref|ZP_05740801.1| MotA/TolQ/ExbB proton channel [Silicibacter sp. TrichCH4B]
gi|259348320|gb|EEW60097.1| MotA/TolQ/ExbB proton channel [Silicibacter sp. TrichCH4B]
Length = 226
Score = 87.9 bits (217), Expect = 1e-15, Method: Composition-based stats.
Identities = 46/213 (21%), Positives = 77/213 (36%), Gaps = 24/213 (11%)
Query: 1 MNNYG--LAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITL----RR 54
MN+ M S+ + G V LL SI+S + ++ K F R
Sbjct: 1 MNDIAQIWGSMRASLLEVIEIGGPVV----VLLIALSIISAATVLYKIWQFRRSGVGRHR 56
Query: 55 QFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRID 114
+ + + G +L N L A AMS + DR D
Sbjct: 57 RVSMALEAYERGD--AKTATALLAQSNSYLVAPVQRAMS------CAEVKDRAAASDRCD 108
Query: 115 RMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSN--NVVSI 172
+V + L FL ++ L+G+ G VLGM+ FQ + ++ V
Sbjct: 109 AEAEVLFL----RLETGLGFLDLVAQLAPLIGLFGTVLGMIEAFQGLQAAGTSVDPTVLA 164
Query: 173 PGIIESLISILLGLCVSIPSSIAYNKFIEDSKK 205
GI +L++ GL V++P + + ++
Sbjct: 165 GGIWVALLTTAAGLAVAMPVAAIHGWLSGAVER 197
>gi|260654395|ref|ZP_05859885.1| MotA/TolQ/ExbB proton channel family protein [Jonquetella anthropi
E3_33 E1]
gi|260631028|gb|EEX49222.1| MotA/TolQ/ExbB proton channel family protein [Jonquetella anthropi
E3_33 E1]
Length = 210
Score = 87.9 bits (217), Expect = 1e-15, Method: Composition-based stats.
Identities = 33/181 (18%), Positives = 69/181 (38%), Gaps = 15/181 (8%)
Query: 42 IIQKSVNFITLRRQFREFE---QLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKS 98
+Q+ + E E + S+ + + L + + +S WK S
Sbjct: 29 FVQRLLFARRAWEDPEEAEGIAADMLAAGRPAEALASVSDGPDTSLRRVLRAGLSHWKLS 88
Query: 99 CDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFF 158
+ ++ I RE + L FL + L+G+LG V+GM+ F
Sbjct: 89 GAD-----------LRDLLQQEIRREAFRWSWGLGFLSVTARVAPLLGLLGTVVGMVDIF 137
Query: 159 QSIAGYYSNN-VVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEF 217
Q++ S+ GI ++L + + GL ++IP+ +A++ + + ++
Sbjct: 138 QALPEVSSSPMTALAGGIYKALFTTVAGLIIAIPALLAHSWCSSRVDRLEETLSRTSDLL 197
Query: 218 S 218
Sbjct: 198 L 198
>gi|328543786|ref|YP_004303895.1| MotA/TolQ/ExbB proton channel [polymorphum gilvum SL003B-26A1]
gi|326413530|gb|ADZ70593.1| MotA/TolQ/ExbB proton channel [Polymorphum gilvum SL003B-26A1]
Length = 239
Score = 87.9 bits (217), Expect = 1e-15, Method: Composition-based stats.
Identities = 38/207 (18%), Positives = 75/207 (36%), Gaps = 12/207 (5%)
Query: 15 ALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCK 74
L G V +L + S+++ ++I K + F + + +
Sbjct: 18 DLVESGGPVV----LILLVMSVVAVGLVIAKLLQFSLA------GVGRYADARKALGLVL 67
Query: 75 SLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSF 134
+ + L S + G + + ++ +L + L
Sbjct: 68 DGREQEAVKLVRAGRSVQNGILLKLIHGRAQQGTRSELLREDIERVCLGQLAALRAYLRP 127
Query: 135 LGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSN--NVVSIPGIIESLISILLGLCVSIPS 192
L +S L+G+LG VLGM+ F+++ G + V GI +L++ +GL ++IP
Sbjct: 128 LDMISQTAPLIGLLGTVLGMIEAFRAMQGAGAAVDPSVLAGGIWVALLTTAVGLSIAIPV 187
Query: 193 SIAYNKFIEDSKKFAMQMEGFANEFSA 219
S F ++ +ME F
Sbjct: 188 SAVVGWFDGIIEREQNEMEALVTAFFT 214
>gi|258405043|ref|YP_003197785.1| MotA/TolQ/ExbB proton channel [Desulfohalobium retbaense DSM 5692]
gi|257797270|gb|ACV68207.1| MotA/TolQ/ExbB proton channel [Desulfohalobium retbaense DSM 5692]
Length = 200
Score = 87.9 bits (217), Expect = 1e-15, Method: Composition-based stats.
Identities = 49/204 (24%), Positives = 90/204 (44%), Gaps = 27/204 (13%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLR----RQFREFEQLFWSGQSLETVCKSLKNHHNIG 83
I + FSIL +VI+ + + + R + ++L G+ E K+L G
Sbjct: 11 IWPILGFSILILAVILDRLLALASFRMLAPAMVSQVKELIREGR--EDEAKALLEEEGPG 68
Query: 84 LAAIFMSAMS-EWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAG 142
A +F++ +S E +K ++ A L + +L L + ++A
Sbjct: 69 SARMFLAIVSVEGRKRREQAAS--------------RTGEALLFHLGRRLPVLSAGAAAA 114
Query: 143 LLVGILGAVLGMMGFFQSIAGY--YSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFI 200
L+G+LG VLGM+ F ++ + + GI ++L++ GL V+IPS +AY+ I
Sbjct: 115 PLMGLLGTVLGMINVFSRVSSAPGGVDIALLADGIWQALLTTAAGLGVAIPSLLAYHFLI 174
Query: 201 EDSKKFAMQM----EGFANEFSAI 220
K +M + F +E +
Sbjct: 175 RLQDKIGFRMAHEGQNFVDELEDM 198
>gi|254424587|ref|ZP_05038305.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Synechococcus sp. PCC 7335]
gi|196192076|gb|EDX87040.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Synechococcus sp. PCC 7335]
Length = 244
Score = 87.9 bits (217), Expect = 1e-15, Method: Composition-based stats.
Identities = 49/232 (21%), Positives = 87/232 (37%), Gaps = 28/232 (12%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFIT-LRRQFREFEQLFWSGQ 67
M+ S LF Q G+A + L SIL+ I+++ + L R+ ++ S +
Sbjct: 1 MEFS--ELFRQGGIA----MWPLLFLSILALGTIMERIWFWSRILTREREVAGRVLESAR 54
Query: 68 -SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
+ + + + +A+ + ++ + EL
Sbjct: 55 REWTNATQIAQAASRLPMGRFLFAALK-----------LKDPAPEVFKLALETSANEELA 103
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA----GYYSNNVVSIPGIIESLISI 182
+ L ++ + L+G+LG V+G++ SI G + GI E+LIS
Sbjct: 104 SMRRGEKVLEAVIAIAPLLGLLGTVVGLINSLGSIDLNALGVGDATAGTALGIGEALIST 163
Query: 183 LLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ----TEGNIS 230
GL ++I S Y F A + NE +L RQ T+G S
Sbjct: 164 AAGLIIAIISLAFYRLFQGFVFGQAKVFQLSGNEL-ELLYRQAWAYTDGRPS 214
>gi|87308941|ref|ZP_01091079.1| probable TolQ-type transport protein [Blastopirellula marina DSM
3645]
gi|87288284|gb|EAQ80180.1| probable TolQ-type transport protein [Blastopirellula marina DSM
3645]
Length = 263
Score = 87.6 bits (216), Expect = 1e-15, Method: Composition-based stats.
Identities = 42/212 (19%), Positives = 87/212 (41%), Gaps = 27/212 (12%)
Query: 26 CIITLLF-IFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLK------- 77
++ L + SI++ I++ +F+++R+ E + SL + + K
Sbjct: 65 GVVGALIGVLSIVAVGFIVE---HFLSIRKDVLMPEDI---AISLSDLVEEGKIDEAIEV 118
Query: 78 ---NHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSF 134
LA + S ++ ++ S A +++ A + ++ K+
Sbjct: 119 CQHPGSRSLLAYVVESGLTRYRSSEFGFAEYKAAVEE--------AGEEQTGQLYRKIEV 170
Query: 135 LGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVS--IPGIIESLISILLGLCVSIPS 192
LG + ++G+ G VLGM+ F +IA + I ++L++ LLGL V+IP+
Sbjct: 171 LGLIGQIAPMLGLTGTVLGMINAFNTIAATDGAPKPAELAEAIGQALVTTLLGLVVAIPA 230
Query: 193 SIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+AY+ F + + L R+
Sbjct: 231 MVAYSFFGNRIDSLVSEAGKRVEQILTPLGRR 262
>gi|99080190|ref|YP_612344.1| MotA/TolQ/ExbB proton channel [Ruegeria sp. TM1040]
gi|99036470|gb|ABF63082.1| MotA/TolQ/ExbB proton channel [Ruegeria sp. TM1040]
Length = 226
Score = 87.6 bits (216), Expect = 1e-15, Method: Composition-based stats.
Identities = 37/185 (20%), Positives = 68/185 (36%), Gaps = 18/185 (9%)
Query: 27 IITLLFIFSILSWSVIIQKSVNFITL----RRQFREFEQLFWSGQSLETVCKSLKNHHNI 82
++ +L SI+S + ++ K F R + + G ++L +
Sbjct: 25 VVVVLIGLSIVSAATVLYKLWQFRRSGVGRHRSISMALEAYERGD--AKTARALLAQSSS 82
Query: 83 GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAG 142
L A AM +G P R D + L FL ++
Sbjct: 83 YLVAPLQRAM--------QGGAGPDHA--RQSDRCDAEAEALFSRLETGLGFLDLVAQLA 132
Query: 143 LLVGILGAVLGMMGFFQSIAGYYSN--NVVSIPGIIESLISILLGLCVSIPSSIAYNKFI 200
L+G+ G VLGM+ FQ + ++ V GI +L++ GL V++P + +
Sbjct: 133 PLIGLFGTVLGMIEAFQGLQAAGTSVDPTVLAGGIWVALLTTAAGLAVAMPVAAVHGWLS 192
Query: 201 EDSKK 205
++
Sbjct: 193 AAVER 197
>gi|225155104|ref|ZP_03723599.1| Biopolymer transport protein-like protein [Opitutaceae bacterium
TAV2]
gi|224804051|gb|EEG22279.1| Biopolymer transport protein-like protein [Opitutaceae bacterium
TAV2]
Length = 276
Score = 87.6 bits (216), Expect = 1e-15, Method: Composition-based stats.
Identities = 35/200 (17%), Positives = 71/200 (35%), Gaps = 28/200 (14%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQ------FREFEQLFWSGQSLETVCKSL---KN 78
I L+ S + ++I + T +Q Q F G +
Sbjct: 48 IIPLWFCSAVIVYLVID--LYLKTAHKQCIRPAAVATLRQQFRDG-----AYQDAFTWTE 100
Query: 79 HHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSM 138
H LA + + + R + + M +AI E ++++L +
Sbjct: 101 QHPSPLANVIHAGL-----------RHSPNGKQAAEDAMAIAIVGENTSYQNRIAYLSVI 149
Query: 139 SSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIPSSIAYN 197
++G+ G V+GM+ F S++ + + + G I L + GL V+IP+ + Y
Sbjct: 150 GVIAPMIGLTGTVIGMISAFASMSQAGAADPSKLSGAIGHVLHATASGLAVAIPAFVFYY 209
Query: 198 KFIEDSKKFAMQMEGFANEF 217
+ ++ A +
Sbjct: 210 LIRNRVTRVIHELSIAATDL 229
>gi|110639945|ref|YP_680155.1| biopolymer transport protein [Cytophaga hutchinsonii ATCC 33406]
gi|110282626|gb|ABG60812.1| outer membrane transport energization protein ExbB [Cytophaga
hutchinsonii ATCC 33406]
Length = 234
Score = 87.6 bits (216), Expect = 1e-15, Method: Composition-based stats.
Identities = 39/224 (17%), Positives = 90/224 (40%), Gaps = 20/224 (8%)
Query: 7 AIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG 66
A +S+ ++ M+ G + + I S+ + ++ I++ + + +
Sbjct: 26 AAESLSLLSILMKGGYL----MIPILILSVAALAIFIERFLYIKNAGKTDEHMLETIKDK 81
Query: 67 ---QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAR 123
L+ KS+ A +F A++ R ++D I+ +M+
Sbjct: 82 IKEGKLDDA-KSICARSTGVTARVFEKALN----------RLGSPVRD-IESIMESVSNI 129
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYS-NNVVSIPGIIESLISI 182
E+ + + L L ++++ + G LG V+GM+ F +I+ + + GI E +I+
Sbjct: 130 EVNRMEKNLGLLAAIAAIAPMFGFLGTVVGMIKSFYNISIANDISIGIIAGGIYEKMITS 189
Query: 183 LLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
GL V + + + Y ++E + +F L + +
Sbjct: 190 ASGLVVGVIAYMMYTYLNHRIDSVIAKLEDNSVDFLDTLYKPSR 233
>gi|325107035|ref|YP_004268103.1| MotA/TolQ/ExbB proton channel [Planctomyces brasiliensis DSM 5305]
gi|324967303|gb|ADY58081.1| MotA/TolQ/ExbB proton channel [Planctomyces brasiliensis DSM 5305]
Length = 285
Score = 87.6 bits (216), Expect = 1e-15, Method: Composition-based stats.
Identities = 43/222 (19%), Positives = 81/222 (36%), Gaps = 22/222 (9%)
Query: 5 GLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFW 64
G A ++ + G+ +L + SI+ ++I+ + +F F
Sbjct: 71 GAAEQSFLMW-MIQASGIFG----AILMLLSIVMMALIMTNVMQVKRDVFIPDDFVNDFQ 125
Query: 65 S---GQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
+ + + + L + +A I MS + M
Sbjct: 126 AKLDAKDYKGAYE-LSKADDSLIARILAVGMSRLDRGYASAVEG-----------MQEVG 173
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV--VSIPGIIESL 179
E +LS+L +SS ++G++G V GM+ FQ IA GI +L
Sbjct: 174 EEENMNYEHRLSYLALISSIAPMIGLMGTVYGMILSFQKIATATVAPKPSELADGISTAL 233
Query: 180 ISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+ L GL V+IP+ IAY+ ++ +++ + L
Sbjct: 234 FTTLEGLAVAIPAMIAYSLLRNRVARYMLEVGMVSEGLMGRL 275
>gi|303229743|ref|ZP_07316523.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Veillonella atypica ACS-134-V-Col7a]
gi|303231754|ref|ZP_07318477.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Veillonella atypica ACS-049-V-Sch6]
gi|302513703|gb|EFL55722.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Veillonella atypica ACS-049-V-Sch6]
gi|302515503|gb|EFL57465.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Veillonella atypica ACS-134-V-Col7a]
Length = 201
Score = 87.6 bits (216), Expect = 1e-15, Method: Composition-based stats.
Identities = 39/200 (19%), Positives = 80/200 (40%), Gaps = 17/200 (8%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLET 71
SI LF+ G ++ L IF +++ + I++ + R+ R+F + +
Sbjct: 3 SIAHLFVAGGF----VMYPLVIFLVVTLMIGIERFFLYRKFRKDMRQFTAVLNNHPGWIM 58
Query: 72 VCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEK 131
+ L+ L +F A+ K ++ + + E +
Sbjct: 59 LPTVLERDTQN-LGTLFAKALRSAKNYN------------GLENRLQDLVGYTDERLKRG 105
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIP 191
L +L + + L+G+LG VLGM+ F + G + G+ E+L++ GL V+I
Sbjct: 106 LGWLSMIVTMAPLLGLLGTVLGMIRAFAVVGGDIGAPTIITGGVSEALVATATGLTVAII 165
Query: 192 SSIAYNKFIEDSKKFAMQME 211
+ ++ F + +E
Sbjct: 166 ALAFHSYCAAKVNDFIVALE 185
>gi|261416129|ref|YP_003249812.1| MotA/TolQ/ExbB proton channel [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|261372585|gb|ACX75330.1| MotA/TolQ/ExbB proton channel [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|302327132|gb|ADL26333.1| MotA/TolQ/ExbB proton channel family protein [Fibrobacter
succinogenes subsp. succinogenes S85]
Length = 188
Score = 87.6 bits (216), Expect = 1e-15, Method: Composition-based stats.
Identities = 26/101 (25%), Positives = 52/101 (51%), Gaps = 1/101 (0%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVS- 171
I + I +T+ L+ + +++S ++G+LG V+G+ F IA ++ +
Sbjct: 65 ITESIRTEIGLAFSPLTKGLTTVENIASISPMLGLLGTVVGIFNAFTVIAASGLDDPSAF 124
Query: 172 IPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEG 212
GI +L++ +LGL V+IP IA+N ++ ++E
Sbjct: 125 ATGIKFALVTTVLGLVVAIPHVIAFNYLNARMEQEQDEVEN 165
>gi|281421199|ref|ZP_06252198.1| hypothetical protein PREVCOP_05080 [Prevotella copri DSM 18205]
gi|281404734|gb|EFB35414.1| MotA/TolQ/ExbB proton channel family protein [Prevotella copri DSM
18205]
Length = 220
Score = 87.6 bits (216), Expect = 1e-15, Method: Composition-based stats.
Identities = 34/203 (16%), Positives = 80/203 (39%), Gaps = 24/203 (11%)
Query: 33 IFSILSWSVI------IQKSVNFI----TLRRQFREFEQLFWSGQSLETVCKSLKNHHNI 82
S+++ ++I I++ + ++ ++ +Q +G K+L +
Sbjct: 30 FMSLVAIALIVGMAFCIERIIYLSLSEINAKKLMQDIDQKVSAGDV--EGAKTLCRNTRG 87
Query: 83 GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAG 142
+A+I + +S D I+R + + + + S++ +
Sbjct: 88 PVASICYQGLMHISESLDD-----------IERSVSGYGTVQAANLEKGCSWIKLFIAMA 136
Query: 143 LLVGILGAVLGMMGFFQSIAGYYS-NNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIE 201
+G LG V+GM+ F I + + G+ +LI+ + G+ V++ + YN +
Sbjct: 137 PSLGFLGTVIGMVMSFDQIQQAGDISPTIVASGMKVALITTIFGIIVALILQVFYNYILS 196
Query: 202 DSKKFAMQMEGFANEFSAILSRQ 224
+ QME A I+++
Sbjct: 197 KVEHLTSQMEESAVTLMDIIAKN 219
>gi|90020002|ref|YP_525829.1| TonB system biopolymer transport component [Saccharophagus
degradans 2-40]
gi|89949602|gb|ABD79617.1| MotA/TolQ/ExbB proton channel [Saccharophagus degradans 2-40]
Length = 460
Score = 87.6 bits (216), Expect = 1e-15, Method: Composition-based stats.
Identities = 28/129 (21%), Positives = 59/129 (45%), Gaps = 1/129 (0%)
Query: 97 KSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMG 156
+ +P + ++ ++ AI +E I L + +S L+G+LG V GM+
Sbjct: 331 RILKVAEDNPGIDTESLELKLEEAILKERPAIESWLGAIKIISMIAPLMGLLGTVTGMIV 390
Query: 157 FFQSIAGYYSNNVV-SIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFAN 215
F++I + + + GI +L++ ++GL V+IP+ + + +K ++ +
Sbjct: 391 TFEAITIFGAGDPKNMASGISGALMTTVMGLIVAIPTVLLHTWLNGKAKHITHVLDEQSA 450
Query: 216 EFSAILSRQ 224
A S Q
Sbjct: 451 GIIAEKSEQ 459
>gi|153007292|ref|YP_001381617.1| MotA/TolQ/ExbB proton channel [Anaeromyxobacter sp. Fw109-5]
gi|152030865|gb|ABS28633.1| MotA/TolQ/ExbB proton channel [Anaeromyxobacter sp. Fw109-5]
Length = 226
Score = 87.2 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 33/216 (15%), Positives = 79/216 (36%), Gaps = 21/216 (9%)
Query: 17 FMQMGLAVKCIITLLFIFSILSWSVIIQKSVNF-ITLRRQFREFEQLFWS---GQSLETV 72
+ + G + I+ L +++ + + F + L+
Sbjct: 12 YHEGGWMMHPILVSLIFV----VGLVVDRIIALYFKANVDKDAFLRGLKKHIYAGDLDKA 67
Query: 73 CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKL 132
+ L ++ + + P G QD + MD A RE +I +
Sbjct: 68 ISFTASQKKTPLTSVIKAGL----------INVPKGEQD-VQAAMDEATLRESPKIEART 116
Query: 133 SFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVS--IPGIIESLISILLGLCVSI 190
+L + + L+G+LG ++G++G F ++A + + I E++ GL +I
Sbjct: 117 GYLAMLGNVATLLGLLGTIVGLIGAFGAVANANPADKATILADSISEAMNCTAFGLLTAI 176
Query: 191 PSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
P+ +AY+ ++ ++ + ++ +
Sbjct: 177 PALVAYSVLQGRTQHMIDEINETSVAVLNLIVANKD 212
>gi|294794297|ref|ZP_06759433.1| MotA/TolQ/ExbB proton channel family protein [Veillonella sp.
3_1_44]
gi|294454627|gb|EFG23000.1| MotA/TolQ/ExbB proton channel family protein [Veillonella sp.
3_1_44]
Length = 205
Score = 87.2 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 40/200 (20%), Positives = 80/200 (40%), Gaps = 17/200 (8%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLET 71
SI LF+ G ++ L IF + + + I++ + + R F ++ QS
Sbjct: 7 SIAHLFVAGGF----VMYPLVIFLLFTLMIGIERIFLYRKFTKDLRRFNKVLEKNQSWIM 62
Query: 72 VCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEK 131
+ L+ L ++F A+ K ++ + ++ E +
Sbjct: 63 LPSVLERDTEE-LGSLFARAIRNAKNYN------------GLENRLQDVVSYADERLKRG 109
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIP 191
LS+L + + L+G+LG VLGM+ F + G + G+ E+L++ GL V+I
Sbjct: 110 LSWLSMIVTMAPLLGLLGTVLGMIRAFAVVGGDIGAPTIITGGVSEALVATATGLTVAII 169
Query: 192 SSIAYNKFIEDSKKFAMQME 211
+ ++ +E
Sbjct: 170 ALGFHSYCAAKVNDSVATLE 189
>gi|282849565|ref|ZP_06258949.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Veillonella parvula ATCC 17745]
gi|282580502|gb|EFB85901.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Veillonella parvula ATCC 17745]
Length = 201
Score = 87.2 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 40/200 (20%), Positives = 80/200 (40%), Gaps = 17/200 (8%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLET 71
SI LF+ G ++ L IF + + + I++ + + R F ++ QS
Sbjct: 3 SIAHLFVAGGF----VMYPLVIFLLFTLMIGIERIFLYRKFTKDLRRFNKVLEKNQSWIM 58
Query: 72 VCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEK 131
+ L+ L ++F A+ K ++ + ++ E +
Sbjct: 59 LPSVLERDTEE-LGSLFARAIRSAKNYN------------GLENRLQDVVSYADERLKRG 105
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIP 191
LS+L + + L+G+LG VLGM+ F + G + G+ E+L++ GL V+I
Sbjct: 106 LSWLSMIVTMAPLLGLLGTVLGMIRAFAVVGGDIGAPTIITGGVSEALVATATGLTVAII 165
Query: 192 SSIAYNKFIEDSKKFAMQME 211
+ ++ +E
Sbjct: 166 ALGFHSYCAAKVNDSVATLE 185
>gi|289523652|ref|ZP_06440506.1| MotA/TolQ/ExbB proton channel family protein [Anaerobaculum
hydrogeniformans ATCC BAA-1850]
gi|289503344|gb|EFD24508.1| MotA/TolQ/ExbB proton channel family protein [Anaerobaculum
hydrogeniformans ATCC BAA-1850]
Length = 203
Score = 87.2 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 37/189 (19%), Positives = 81/189 (42%), Gaps = 19/189 (10%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL----ETVCKSLKNHHNIG 83
+ + S++ +V++++ + E+ G+ L SL
Sbjct: 8 MYAILAVSVVGLAVVLERIWFYAKSWTNPELLERKL--GELLYKGDAEAAASLVREKESS 65
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
L +F +A+ W + + + +++ + EL + L+ L +++
Sbjct: 66 LHRLFRAAIDHW-----------LAPPEALKMLLEQEVRHELYRWEKGLTLLSTVARVTP 114
Query: 144 LVGILGAVLGMMGFFQSIAGYY--SNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIE 201
L+G+LG VLG++ F+S+A +N + GI E+L++ + GL V+IP+ + Y+ F
Sbjct: 115 LLGLLGTVLGIVDVFRSVAESEGPTNMALLASGIWEALLTTVAGLAVAIPAVLCYSWFSS 174
Query: 202 DSKKFAMQM 210
+
Sbjct: 175 KIDALEESL 183
>gi|254448176|ref|ZP_05061639.1| MotA/TolQ/ExbB proton channel [gamma proteobacterium HTCC5015]
gi|198262302|gb|EDY86584.1| MotA/TolQ/ExbB proton channel [gamma proteobacterium HTCC5015]
Length = 460
Score = 87.2 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 29/124 (23%), Positives = 62/124 (50%), Gaps = 4/124 (3%)
Query: 104 RSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAG 163
++ + ++ + AIA E+ + ++ +++ L+G+LG V GM+ F+++A
Sbjct: 333 KNKDADTETLELHLSEAIANEVPVFNRYIGWIKLIAAVAPLLGLLGTVTGMISVFETLAL 392
Query: 164 YYSNN-VVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
+ + GI ++L++ +LGL +IP+ + S+ + +E A IL+
Sbjct: 393 SGAGDPKDMAGGISQALMTTVLGLVAAIPALFMHALCTSMSRTQVLILEERAT---GILA 449
Query: 223 RQTE 226
RQ E
Sbjct: 450 RQAE 453
>gi|294792501|ref|ZP_06757648.1| MotA/TolQ/ExbB proton channel family protein [Veillonella sp.
6_1_27]
gi|294456400|gb|EFG24763.1| MotA/TolQ/ExbB proton channel family protein [Veillonella sp.
6_1_27]
Length = 205
Score = 87.2 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 40/200 (20%), Positives = 80/200 (40%), Gaps = 17/200 (8%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLET 71
SI LF+ G ++ L IF + + + I++ + + R F ++ QS
Sbjct: 7 SIAHLFVAGGF----VMYPLVIFLLFTLMIGIERIFLYRKFTKDLRRFNKVLEKNQSWIM 62
Query: 72 VCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEK 131
+ L+ L ++F A+ K ++ + ++ E +
Sbjct: 63 LPSVLERDTEE-LGSLFARAIRNAKNYN------------GLENRLQDVVSYADERLKRG 109
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIP 191
LS+L + + L+G+LG VLGM+ F + G + G+ E+L++ GL V+I
Sbjct: 110 LSWLSMVVTMAPLLGLLGTVLGMIRAFSVVGGDIGAPTIITGGVSEALVATATGLTVAII 169
Query: 192 SSIAYNKFIEDSKKFAMQME 211
+ ++ +E
Sbjct: 170 ALGFHSYCAAKVNDSVATLE 189
>gi|110633791|ref|YP_673999.1| MotA/TolQ/ExbB proton channel [Mesorhizobium sp. BNC1]
gi|110284775|gb|ABG62834.1| outer membrane transport energization protein ExbB [Chelativorans
sp. BNC1]
Length = 232
Score = 87.2 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 43/225 (19%), Positives = 86/225 (38%), Gaps = 22/225 (9%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLR----RQFREFEQLFWSGQ 67
SI +L G+ + +L + SI + ++I+ K F R R ++
Sbjct: 8 SIASLLELGGIV---VALILVL-SIFAVAIILLKFAQFWRERVGRHRGAERALHAWFHAG 63
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ ++ + A+ S + I+D + R+ L +
Sbjct: 64 H-GEARRMVEGDRSPAGEALAAS-----MRLAAMRNVPKDAIEDEVARI----ALSRLHD 113
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLG 185
+ L +++ L+G+ G VLGM+ F+ + AG + + GI +L++ G
Sbjct: 114 LQRGFRALDAIAQISPLLGLFGTVLGMIEAFRQLQNAGNAVDPSMLAGGIWVALLTTAAG 173
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAI--LSRQTEGN 228
L V++P S+ F + + +E + + RQ EG
Sbjct: 174 LAVAMPVSLLLTWFETRVENERVAIETMTSAVLSHRGAHRQPEGE 218
>gi|313893039|ref|ZP_07826616.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Veillonella sp. oral taxon 158 str. F0412]
gi|313442392|gb|EFR60807.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Veillonella sp. oral taxon 158 str. F0412]
Length = 205
Score = 87.2 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 41/218 (18%), Positives = 83/218 (38%), Gaps = 24/218 (11%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQF---REFEQLFWSGQSL 69
+ LF G ++ L + S + ++ +++ + + Q
Sbjct: 7 VIHLFHSGGY----VMYPLLLLSFMVIAIATERAFYYRKYAGKTFVVTHAVNELAKLQKW 62
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+ + K +K + +I + I + + ++ + + +
Sbjct: 63 DEIDKVIKENPSIA-SRIAEAGLH------------NASSEEAMKTAFADQMGVDAVGFR 109
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVS 189
+ + +L + + L+G+LG V GM+G F SI + G+ E+LI+ GLCV+
Sbjct: 110 KYMDYLSATVTISPLLGLLGTVTGMIGSF-SILDAGAGASAITGGVGEALIATASGLCVA 168
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEG 227
I + I Y F Q+EG I+S + EG
Sbjct: 169 IMAFIVYTFFSHRLDSIINQIEGMCV---NIVSAKREG 203
>gi|254510099|ref|ZP_05122166.1| MotA/TolQ/ExbB proton channel family domain protein
[Rhodobacteraceae bacterium KLH11]
gi|221533810|gb|EEE36798.1| MotA/TolQ/ExbB proton channel family domain protein
[Rhodobacteraceae bacterium KLH11]
Length = 220
Score = 86.8 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 39/185 (21%), Positives = 76/185 (41%), Gaps = 21/185 (11%)
Query: 27 IITLLFIFSILSWSVIIQKSVNFIT----LRRQFREFEQLFWSGQSLETVCKSLKNHHNI 82
++ +L + S+L+ +V + K + + + Q W T L +
Sbjct: 17 VVAILMVMSVLTVAVSLYKLWQYAACGVGRHKILSQALQA-WDEGDRATARTRLSKSSSY 75
Query: 83 GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAG 142
LA + AM +P +D +D L ++ L +++
Sbjct: 76 -LAPLVEVAM--------YAPDTPD-----LDARLDAEAGLALAKLERGFRLLDTVAQIA 121
Query: 143 LLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFI 200
L+G+ G VLGM+ FQS+ AG + + GI +L++ GL V++P+S+ + F
Sbjct: 122 PLLGLFGTVLGMIDAFQSLQSAGSSVDPSLLAGGIWVALVTTAAGLAVAMPTSMVLSWFE 181
Query: 201 EDSKK 205
+ +
Sbjct: 182 SRTAR 186
>gi|226196831|ref|ZP_03792410.1| MotA/TolQ/ExbB proton channel family protein [Burkholderia
pseudomallei Pakistan 9]
gi|225931091|gb|EEH27099.1| MotA/TolQ/ExbB proton channel family protein [Burkholderia
pseudomallei Pakistan 9]
Length = 148
Score = 86.8 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 25/142 (17%), Positives = 47/142 (33%), Gaps = 3/142 (2%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
I + +L SI SW ++ K+ + +RQ FW +L+
Sbjct: 7 ILHYLASGDAVTHAVAYVLLAMSIASWCFLLVKAWVLVRAKRQGPAALAAFWRAATLDDG 66
Query: 73 CKSLKNHHNIGLAAIF---MSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+L+ + A + + + +R+ R + A+ +
Sbjct: 67 IAALRAADKERVFAPLAEAAREADAASRVEPHALAARVERGERVLRALRHALRASQRRLE 126
Query: 130 EKLSFLGSMSSAGLLVGILGAV 151
L S+ S VG+LG V
Sbjct: 127 FGQVLLASIGSTAPFVGLLGTV 148
>gi|313894298|ref|ZP_07827863.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Veillonella sp. oral taxon 158 str. F0412]
gi|313441122|gb|EFR59549.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Veillonella sp. oral taxon 158 str. F0412]
Length = 201
Score = 86.8 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 42/215 (19%), Positives = 85/215 (39%), Gaps = 17/215 (7%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLET 71
SI LF+ G ++ L IF + + + I++ V + + R F ++ QS
Sbjct: 3 SIAHLFVAGGF----VMYPLVIFLLFALMIGIERIVLYRKFTKDLRRFNKVLEKNQSWVM 58
Query: 72 VCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEK 131
+ L+ L ++F AM K ++ + ++ E +
Sbjct: 59 LPSVLERDTEE-LGSLFARAMRSAKNYN------------GLENRLQDVVSYADERLKRG 105
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIP 191
LS+L + + L+G+LG VLGM+ F + G + G+ E+L++ GL V+I
Sbjct: 106 LSWLSMIVTMAPLLGLLGTVLGMIRAFAVVGGDIGAPTIITGGVSEALVATATGLTVAII 165
Query: 192 SSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+ ++ +E + + + +
Sbjct: 166 ALGFHSYCAAKVNDSITTLEHECGNILDVYNEEHD 200
>gi|225164268|ref|ZP_03726539.1| MotA/TolQ/ExbB proton channel [Opitutaceae bacterium TAV2]
gi|224801110|gb|EEG19435.1| MotA/TolQ/ExbB proton channel [Opitutaceae bacterium TAV2]
Length = 253
Score = 86.8 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 37/198 (18%), Positives = 77/198 (38%), Gaps = 15/198 (7%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLK--NHHNIGLA 85
I +L + L + I++++ + + F + + + +++ +A
Sbjct: 16 IWVLLLMGALGLVLFIERTLYLHRGQIRSTSFVDGIKNILAKRRIVEAVTVCEETPGPVA 75
Query: 86 AIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLV 145
A+ +A+ + R+ + A EL + +L + +++ LV
Sbjct: 76 AVVKAAL-----------IHAGDDETRMRYAVQDAAVIELPSLERRLGSIAAIAQIAPLV 124
Query: 146 GILGAVLGMMGFFQSIAGYY--SNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDS 203
G+LG VLG+ F S + G+ +SLI+ GL + IP+ +AY+
Sbjct: 125 GLLGTVLGLTATFHSFMQGGEYATARALAGGMWQSLITAGAGLALGIPAHLAYHLLNGRV 184
Query: 204 KKFAMQMEGFANEFSAIL 221
+ +E NE L
Sbjct: 185 RAIVRDVEWAGNEIMRYL 202
>gi|145588474|ref|YP_001155071.1| MotA/TolQ/ExbB proton channel [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
gi|145046880|gb|ABP33507.1| MotA/TolQ/ExbB proton channel [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
Length = 212
Score = 86.8 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 41/219 (18%), Positives = 87/219 (39%), Gaps = 32/219 (14%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE-- 70
++++ + G I L I SI+ +++I++S + +F G SLE
Sbjct: 1 MYSILLSAGWP----IWPLLIISIIGLAIVIERSWYLRQI--------HIFPKG-SLELT 47
Query: 71 -TVCKSLKNHHNIGLAAIFMSA--------MSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
+C + N N+ A + A + K G+ + + +++ +
Sbjct: 48 FGMCNQIANQKNVSEAQVTELAQLSPATPLFACVLKEKLSGSSAAVALEE-----LQALA 102
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA---GYYSNNVVSIPGIIES 178
++ L L ++++ L+G+ G V+GM+ F S G + GI +
Sbjct: 103 QATWLKLDRYLGALATIATVAPLLGLFGTVVGMIEIFGSQGAVNGVAGSPQELAHGISVA 162
Query: 179 LISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEF 217
L + GL ++IP+ A+ + + + E F +
Sbjct: 163 LYNTAFGLLIAIPALAAWRGLRAMANQRQRECEEFTRQL 201
>gi|197337647|ref|YP_002157783.1| TolQ protein [Vibrio fischeri MJ11]
gi|197314899|gb|ACH64348.1| TolQ protein [Vibrio fischeri MJ11]
Length = 451
Score = 86.8 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 25/110 (22%), Positives = 53/110 (48%), Gaps = 1/110 (0%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-V 169
+ ++ + I E + + + LS L +++ ++G+LG V GM+ FQ I + + +
Sbjct: 326 EALELRLLETIVDEQQGLEKGLSMLKLLAALAPMLGLLGTVTGMIETFQVITQFGNGDPK 385
Query: 170 VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
V GI +L++ +LGL ++P + +N ++ +E A
Sbjct: 386 VMAGGISMALVTTVLGLVAAMPLLLTHNILSSQAESIRTILEKQGLGLVA 435
>gi|145297920|ref|YP_001140761.1| TolQ proton channel protein [Aeromonas salmonicida subsp.
salmonicida A449]
gi|142850692|gb|ABO89013.1| TolQ proton channel protein [Aeromonas salmonicida subsp.
salmonicida A449]
Length = 454
Score = 86.8 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 26/122 (21%), Positives = 56/122 (45%), Gaps = 4/122 (3%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN- 168
+ ++ +D I R + + + +S + ++S +LG V+GM+ FQ+I + + +
Sbjct: 334 IEDLESKLDEIILRNVPKFEKGISIIKLIASVAP---LLGTVVGMIATFQAITLFGTGDP 390
Query: 169 VVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
+ GI E+L++ + GL V++P Y S++ +E + F A
Sbjct: 391 KLMAGGISEALVTTMQGLVVAVPMLFLYTIVQTQSRRLIQVLEEQSAGFVARYQESLHAT 450
Query: 229 IS 230
+
Sbjct: 451 KA 452
>gi|261414456|ref|YP_003248139.1| MotA/TolQ/ExbB proton channel [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|261370912|gb|ACX73657.1| MotA/TolQ/ExbB proton channel [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|302328141|gb|ADL27342.1| MotA/TolQ/ExbB proton channel family protein [Fibrobacter
succinogenes subsp. succinogenes S85]
Length = 522
Score = 86.8 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 35/147 (23%), Positives = 65/147 (44%), Gaps = 1/147 (0%)
Query: 66 GQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
G+ K+L N A SA E K + ++ ++V A E+
Sbjct: 361 GRGARNAVKALANRDLRLATAESQSAHGEVGKVLRSVLGKNFKDRASAEKSLEVLFAGEV 420
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-VVSIPGIIESLISILL 184
++ LS++ +S L+G+LG V+GM+ F I + +++ + GI +L++
Sbjct: 421 PKLEMGLSWISVFASTAPLLGLLGTVMGMIELFNVITMHGTSDPKLLAGGISIALVTTEA 480
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQME 211
GL V+IP + + + S +ME
Sbjct: 481 GLIVAIPLQLLHTLLVNISDSVRTRME 507
>gi|209808938|ref|YP_002264476.1| biopolymer transport protein TolR [Aliivibrio salmonicida LFI1238]
gi|208010500|emb|CAQ80866.1| biopolymer transport protein TolR [Aliivibrio salmonicida LFI1238]
Length = 451
Score = 86.8 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 44/211 (20%), Positives = 88/211 (41%), Gaps = 33/211 (15%)
Query: 18 MQMGLAV-KCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSL 76
+Q G V + II LL I ++S + + +R+Q R T K
Sbjct: 260 LQAGGVVGQIIIALLAIGLLIS----LFNGARLLVIRQQIR-------------TQLKDP 302
Query: 77 KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLG 136
+ N L + +E +S + ++ + I E + + + LS L
Sbjct: 303 AHIGNNPLGRVLSVYDAEKTRSV-----------EALELRLLETIVDEQQGLEKGLSMLK 351
Query: 137 SMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-VVSIPGIIESLISILLGLCVSIPSSIA 195
+++ ++G+LG V GM+ FQ I + + + V GI +L++ +LGL ++P +
Sbjct: 352 LLAALAPMLGLLGTVTGMIETFQVITQFGNGDPKVMAGGISMALVTTVLGLVAAMPLLLT 411
Query: 196 YNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+N ++ +E ++++ Q E
Sbjct: 412 HNILSSQAESIRTILEKQG---LSLVAEQAE 439
>gi|297182080|gb|ADI18253.1| biopolymer transport proteins [uncultured Chromatiales bacterium
HF0200_41F04]
Length = 222
Score = 86.4 bits (213), Expect = 3e-15, Method: Composition-based stats.
Identities = 38/201 (18%), Positives = 75/201 (37%), Gaps = 20/201 (9%)
Query: 27 IITLLFIFSILSWSVIIQKSVNFITLR----RQFREFEQLFWSGQSLETVCKSLKNHHNI 82
++ +L I S+ ++V + K L E + G +T L + I
Sbjct: 27 VVAVLLIISVFGFAVALYKFFQLSKLNPGRFSMLHEALDQWSDGP--QTCMDKL-DRSQI 83
Query: 83 GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAG 142
GL+ I + E + S D + + + L + + L +
Sbjct: 84 GLSPILRFGL-ENRDSPDT---------EELREELARRATNFLYPYGKYMRPLELIYYLA 133
Query: 143 LLVGILGAVLGMMGFFQSI---AGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKF 199
++G+LG VLGM+ F+ + AG ++ GI E+L++ +GL ++IP ++ +
Sbjct: 134 PVLGLLGTVLGMIDAFRGLESSAGMDKDSTALAGGIWEALLTTAVGLSIAIPFTVVHAWL 193
Query: 200 IEDSKKFAMQMEGFANEFSAI 220
+ I
Sbjct: 194 ETRLDNATAMVSDLLTRVMTI 214
>gi|148260193|ref|YP_001234320.1| MotA/TolQ/ExbB proton channel [Acidiphilium cryptum JF-5]
gi|146401874|gb|ABQ30401.1| outer membrane transport energization protein ExbB [Acidiphilium
cryptum JF-5]
Length = 223
Score = 86.4 bits (213), Expect = 3e-15, Method: Composition-based stats.
Identities = 33/170 (19%), Positives = 68/170 (40%), Gaps = 9/170 (5%)
Query: 61 QLFW-------SGQSLETVCKSLKNHHNIGLAAIFMS-AMSEWKKSCDKGARSPIGIQDR 112
+ FW +G+ + +++ + GL + + + S D
Sbjct: 31 ERFWLLKRTLGAGRRIHAALRAVGYGNPAGLRQLAETNGATLQGHLIATALASRGENADE 90
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI 172
+D ++ I + IT L L + + L+G+ G ++GM+ F ++ V+
Sbjct: 91 LDNHLEEEIMDAMPRITRGLWILDTAVTIAPLLGLFGTIIGMIQAFDVLSSNGGPAKVTG 150
Query: 173 PGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
GI ++L+S GL ++I + N F S++ +Q+E L
Sbjct: 151 -GIADALVSTGAGLLIAIIAVYLVNYFNNLSRRIVLQLELIKVVLINRLH 199
>gi|24373390|ref|NP_717433.1| MotA/TolQ/ExbB proton channel family protein [Shewanella oneidensis
MR-1]
gi|24347659|gb|AAN54877.1|AE015626_6 MotA/TolQ/ExbB proton channel family protein [Shewanella oneidensis
MR-1]
Length = 451
Score = 86.4 bits (213), Expect = 3e-15, Method: Composition-based stats.
Identities = 26/110 (23%), Positives = 56/110 (50%), Gaps = 1/110 (0%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-V 169
+ ++ +D AI +E + ++ L +++ G ++G+LG V GM+ FQSI + + +
Sbjct: 334 ETLELKLDEAILKETPALEARIPILKVIAAIGPMLGLLGTVTGMIATFQSIQLFGTGDPK 393
Query: 170 VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
+ GI +L++ + GL ++P + + + SK +E + A
Sbjct: 394 LMAGGISMALVTTVQGLVAALPLMLLHAMLVARSKSITQILEEQSAGIIA 443
>gi|297171897|gb|ADI22884.1| biopolymer transport proteins [uncultured Rhizobium sp.
HF0500_35F13]
Length = 285
Score = 86.4 bits (213), Expect = 3e-15, Method: Composition-based stats.
Identities = 36/219 (16%), Positives = 84/219 (38%), Gaps = 17/219 (7%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFIT---LRRQFREFEQLFWSGQSL 69
F + G++ I+ L S+ + + ++ + + + +
Sbjct: 59 FFGIVFAGGISGVVIMISLLGLSLSAAYLAFEQLLTLRHGEMMPDGLDDEVRELIKAGQF 118
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+ ++ LA I + E G + +++ M+ A + ++
Sbjct: 119 RQALELCAGTPSL-LAVIIRQGIVE-----------VDGDWNDVEKAMEDATEEQSAQLF 166
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV--SIPGIIESLISILLGLC 187
++ +L + + +VG+LG V+GM+ FQ +A + GI ++L++ + GL
Sbjct: 167 RRVEYLSVIGNIAPMVGLLGTVIGMIVAFQEVAATQGSAGAGDLAAGIYQALVTTVGGLI 226
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
V+IPS A+ F + + A + R++
Sbjct: 227 VAIPSLGAFAVFRNRIDQLVAEAAHRAQRALVPIKRRSR 265
>gi|126732839|ref|ZP_01748632.1| MotA/TolQ/ExbB proton channel [Sagittula stellata E-37]
gi|126706678|gb|EBA05751.1| MotA/TolQ/ExbB proton channel [Sagittula stellata E-37]
Length = 213
Score = 86.4 bits (213), Expect = 3e-15, Method: Composition-based stats.
Identities = 41/196 (20%), Positives = 79/196 (40%), Gaps = 16/196 (8%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITL----RRQFREFEQLFWSGQSLETVCKSLKNHHN 81
+ L I S+L+ +V I K V F+ L R++ E + SG+ +
Sbjct: 15 IVFGALGILSLLAIAVAIYKWVQFMVLGVGRRKRAEEILDNWLSGR--ADLALQQAQKRK 72
Query: 82 IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSA 141
LA I + S G ++ G + + EL +T+++ L + A
Sbjct: 73 SVLARILQAVFS--------GVQAKPGDSTYAEELGRQTAIIELATMTDRMRTLEMVVQA 124
Query: 142 GLLVGILGAVLGMMGFFQSIAGYYSN--NVVSIPGIIESLISILLGLCVSIPSSIAYNKF 199
++G+LG V+GM+ F ++A + GI +L + GL +++ + N F
Sbjct: 125 APMLGLLGTVIGMIDAFSALAVAEGAVDPTILAAGIYTALTTTAAGLAIALVAYFVANYF 184
Query: 200 IEDSKKFAMQMEGFAN 215
++ +E +
Sbjct: 185 ESRIERERNMIETVIS 200
>gi|300726783|ref|ZP_07060213.1| MotA/TolQ/ExbB proton channel family protein [Prevotella bryantii
B14]
gi|299775896|gb|EFI72476.1| MotA/TolQ/ExbB proton channel family protein [Prevotella bryantii
B14]
Length = 281
Score = 86.4 bits (213), Expect = 3e-15, Method: Composition-based stats.
Identities = 33/189 (17%), Positives = 73/189 (38%), Gaps = 18/189 (9%)
Query: 43 IQKSVNFIT----LRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKS 98
I++ + ++ ++ E + KSL +A+I + +S
Sbjct: 104 IERIIYLSLSEIDAKKMMKDIEAKV-EADDI-EGAKSLCRETRGPVASICYQGLLRIHES 161
Query: 99 CDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFF 158
D I+R + + + + S++ +A +G LG V+GM+ F
Sbjct: 162 IDD-----------IERSISSYGTVQAANLEKGCSWIKLFIAAAPSLGFLGTVIGMVMAF 210
Query: 159 QSIAGYYS-NNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEF 217
I + + G+ +LI+ + G+ V++ + YN + + QME A
Sbjct: 211 DQIEQAGDISPTIVASGMKVALITTIFGIIVALILQMFYNYILSKIEHLDSQMEESAITL 270
Query: 218 SAILSRQTE 226
I++++ +
Sbjct: 271 MDIIAKRKQ 279
>gi|94500769|ref|ZP_01307298.1| TonB system biopolymer transport component [Oceanobacter sp. RED65]
gi|94427091|gb|EAT12072.1| TonB system biopolymer transport component [Oceanobacter sp. RED65]
Length = 461
Score = 86.4 bits (213), Expect = 3e-15, Method: Composition-based stats.
Identities = 27/125 (21%), Positives = 63/125 (50%), Gaps = 4/125 (3%)
Query: 105 SPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGY 164
+ + ++ + AI+ E+ +T ++++ +S L+G+LG V GM+ F++++ +
Sbjct: 334 NQDADTETLELHLGEAISNEVPRLTAGVNWIKIISVVAPLLGLLGTVTGMIDVFETMSLF 393
Query: 165 YSNN-VVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
+ + + GI ++L++ +LGL +IP + S+ ++ A IL+R
Sbjct: 394 GTGDPKLMAGGISQALVTTVLGLVAAIPCVFLHTMTNNKSRDLIQILQERAT---GILAR 450
Query: 224 QTEGN 228
+ E
Sbjct: 451 KAEEQ 455
>gi|257455180|ref|ZP_05620415.1| MotA/TolQ/ExbB proton channel [Enhydrobacter aerosaccus SK60]
gi|257447142|gb|EEV22150.1| MotA/TolQ/ExbB proton channel [Enhydrobacter aerosaccus SK60]
Length = 207
Score = 86.4 bits (213), Expect = 3e-15, Method: Composition-based stats.
Identities = 39/208 (18%), Positives = 85/208 (40%), Gaps = 23/208 (11%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFIT-----LRRQFREFEQLFWSGQ 67
++ L G + + + SIL +II++++ + + + L G
Sbjct: 1 MWELVKAGGWL----MWPIVLCSILMLIIIIERAIKLKVSTVTPAHLREQLMQHLIEQGD 56
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+++K N L I + + + D + M+ + + +
Sbjct: 57 IDRESLENVKL--NSPLGDILAAGL-----------MNRQHGIDSMTMHMENRASITIHQ 103
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA-GYYSNNVVSIPGIIESLISILLGL 186
+ + ++ LG++ + L+G+LG VLG++ F +I G + + G+ ++LI+ G+
Sbjct: 104 LEKHINMLGTIGAIAPLLGLLGTVLGIISSFLAITEGAMQDPTMLAAGVSQALITTAGGM 163
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFA 214
V+IP+ +AY F E A
Sbjct: 164 LVAIPAVMAYRIFQRRIIDINAAFEQEA 191
>gi|84501361|ref|ZP_00999566.1| MotA/TolQ/ExbB proton channel family protein [Oceanicola batsensis
HTCC2597]
gi|84390652|gb|EAQ03140.1| MotA/TolQ/ExbB proton channel family protein [Oceanicola batsensis
HTCC2597]
Length = 210
Score = 86.0 bits (212), Expect = 3e-15, Method: Composition-based stats.
Identities = 41/196 (20%), Positives = 81/196 (41%), Gaps = 14/196 (7%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLF--WSGQSLETVCKSLKNHHNIG 83
++ +L + S++S ++I+ KS+ + R ++ WS E +L
Sbjct: 14 IVLIVLAVLSLISIALIVAKSLQLASARGGAAGRDEALVQWSKGDKEQAIAALAAGRTPA 73
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
+ + + K K ++ + E+E + + L ++
Sbjct: 74 DRVLHYALKATLGKMPRKP----------LEAELMRRGNAEVEALNRNIRILELVAMIAP 123
Query: 144 LVGILGAVLGMMGFFQS--IAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIE 201
L+G+LG VLGM+ FQ +A +N V GI ++L++ GL V+IP+++
Sbjct: 124 LLGLLGTVLGMIQSFQELEMAQGAANASVLAGGIWQALLTTAAGLVVAIPAAVGATLLSS 183
Query: 202 DSKKFAMQMEGFANEF 217
A +E A +F
Sbjct: 184 RVDGAAHDIEAAAGQF 199
>gi|224535148|ref|ZP_03675687.1| hypothetical protein BACCELL_00008 [Bacteroides cellulosilyticus
DSM 14838]
gi|224523198|gb|EEF92303.1| hypothetical protein BACCELL_00008 [Bacteroides cellulosilyticus
DSM 14838]
Length = 130
Score = 86.0 bits (212), Expect = 3e-15, Method: Composition-based stats.
Identities = 28/100 (28%), Positives = 56/100 (56%), Gaps = 1/100 (1%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI 172
I + ++ A A EL + + L +G++++ G L+G+LG V+GM+ F ++A S + +++
Sbjct: 16 IQKELEEATALELPMMEQNLPIIGTITTLGTLMGLLGTVIGMIRSFAALAAGGSADSMAL 75
Query: 173 P-GIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
GI E+LI+ G+ + I+YN + K ++
Sbjct: 76 SQGISEALINTAFGILTGALAVISYNYYTNKIDKLTYSLD 115
>gi|124514954|gb|EAY56465.1| putative MotA/TolQ/ExbB proton channel [Leptospirillum rubarum]
Length = 234
Score = 86.0 bits (212), Expect = 4e-15, Method: Composition-based stats.
Identities = 38/234 (16%), Positives = 84/234 (35%), Gaps = 37/234 (15%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+++ ++ G I+ LL S ++ +VI ++ V + + G
Sbjct: 1 MNLLEYLLRGGP----IMYLLLPMSAIALAVITERMVYIRREKIGTFRILAILRKG---- 52
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAR------- 123
A+ M + +K + + + + + +D I+
Sbjct: 53 ---------------ALGEQGMGDVRKLLEDSNKKHLIVGKILSLFLDRKISEGDIEHLV 97
Query: 124 ------ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGII 176
E + + E + L + + L+G+LG ++G++ F ++ I G+
Sbjct: 98 EAEALLEEKRLKEWMWILDTTITMAPLLGLLGTIMGIISSFHVMSISGLGKPAQITGGVA 157
Query: 177 ESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
E+LI+ GL ++I S YN ++ +E A + T + S
Sbjct: 158 EALIATATGLVIAIISLGFYNMLNTQIREIRNGIESSARLLFHLQEHLTRSDTS 211
>gi|308049133|ref|YP_003912699.1| MotA/TolQ/ExbB proton channel [Ferrimonas balearica DSM 9799]
gi|307631323|gb|ADN75625.1| MotA/TolQ/ExbB proton channel [Ferrimonas balearica DSM 9799]
Length = 435
Score = 86.0 bits (212), Expect = 4e-15, Method: Composition-based stats.
Identities = 43/212 (20%), Positives = 83/212 (39%), Gaps = 32/212 (15%)
Query: 18 MQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLK 77
Q GL + I+ LL I ++ + + ++ + S ++ K +
Sbjct: 252 AQGGLVGQVILVLLAIGAL----IALVRAAVLLR-------------SQLAINKQLKQRE 294
Query: 78 NHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGS 137
+ N L I + + + AI E + + + LS L
Sbjct: 295 ANDNNPLGRI----LKVYHAQKHHNLETLELKL-------LEAIVNEQQGLEKGLSMLKL 343
Query: 138 MSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-VVSIPGIIESLISILLGLCVSIPSSIAY 196
M++ ++G+LG V GM+ FQ I Y + + V GI +L++ +LGL ++P +A+
Sbjct: 344 MAAIAPMLGLLGTVTGMIETFQVITQYGNGDPKVMAGGISMALVTTVLGLVAAMPLLLAH 403
Query: 197 NKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
N +E E A+++ +G
Sbjct: 404 NLLSTRVTVIRSLLEK---ESIALVAAHADGE 432
>gi|206603912|gb|EDZ40392.1| Putative biopolymer transport protein [Leptospirillum sp. Group II
'5-way CG']
Length = 234
Score = 86.0 bits (212), Expect = 4e-15, Method: Composition-based stats.
Identities = 38/221 (17%), Positives = 81/221 (36%), Gaps = 11/221 (4%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+++ ++ G I+ LL S ++ +VI ++ V + + G E
Sbjct: 1 MNLLEYLLRGGP----IMYLLLPMSAIALAVITERLVYIRREKIGTFRILAILRKGALGE 56
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
++ + K I D I+ +++ E + + E
Sbjct: 57 QGIGDVRKLLEDSNKKHLIVG-----KILSLFLDRKISEGD-IEHLVEAEALLEEKRLKE 110
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCVS 189
+ L + + L+G+LG ++G++ F ++ I G+ E+LI+ GL ++
Sbjct: 111 WMWILDTTITMAPLLGLLGTIMGIISSFHVMSISGLGKPAQITGGVAEALIATATGLVIA 170
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
I S YN ++ +E A + T + S
Sbjct: 171 IISLGFYNMLNTQIREIRNGIESSARLLFHLQEHLTRSDTS 211
>gi|218960924|ref|YP_001740699.1| MotA/TolQ/ExbB proton channel family protein (modular protein)
[Candidatus Cloacamonas acidaminovorans]
gi|167729581|emb|CAO80493.1| MotA/TolQ/ExbB proton channel family protein (modular protein)
[Candidatus Cloacamonas acidaminovorans]
Length = 253
Score = 86.0 bits (212), Expect = 4e-15, Method: Composition-based stats.
Identities = 42/211 (19%), Positives = 81/211 (38%), Gaps = 18/211 (8%)
Query: 17 FMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS--GQSLETVCK 74
F G A + + +I + II K + + + F + K
Sbjct: 53 FKDGGWA----MWPILFLAIYGLAYIIWKFIALLNGKINLNTFLDKIIPLIKEKKFEEAK 108
Query: 75 SLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSF 134
+ + +AAI + + + K +D ++ A E+ + +
Sbjct: 109 EIAKNTRGPIAAIIYAGLEKVDKG-----------MAAVDEAIENASMIEMSYLEKGFIE 157
Query: 135 LGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSS 193
L S + ++G LG V GM+ F+SIA + + + GI +LI+ GL V+IP
Sbjct: 158 LSSSITLAPMLGFLGTVAGMITAFESIAAARAVDATIVATGIRIALITTEAGLIVAIPVQ 217
Query: 194 IAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
N F+ + M+ + +F+ L+ +
Sbjct: 218 FFNNVFMTMVDGIVIDMQRASEKFTETLAEE 248
>gi|326402865|ref|YP_004282946.1| putative proton channel MotA/TolQ/ExbB [Acidiphilium multivorum
AIU301]
gi|325049726|dbj|BAJ80064.1| putative proton channel MotA/TolQ/ExbB [Acidiphilium multivorum
AIU301]
Length = 223
Score = 86.0 bits (212), Expect = 4e-15, Method: Composition-based stats.
Identities = 33/170 (19%), Positives = 68/170 (40%), Gaps = 9/170 (5%)
Query: 61 QLFW-------SGQSLETVCKSLKNHHNIGLAAIFMS-AMSEWKKSCDKGARSPIGIQDR 112
+ FW +G+ + +++ + GL + + + S D
Sbjct: 31 ERFWLLKRTLGAGRRIHAALRAVGYGNPAGLRQLAETNGATLQGHLIATALASRGENADE 90
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI 172
+D ++ I + IT L L + + L+G+ G ++GM+ F ++ V+
Sbjct: 91 LDNHLEEEIMDAMPRITRGLWILDTAVTIAPLLGLFGTIIGMIQAFDVLSSNGGPAKVTG 150
Query: 173 PGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
GI ++L+S GL ++I + N F S++ +Q+E L
Sbjct: 151 -GIADALVSTGAGLLIAIIAVYLVNYFNNLSRQIVLQLELIKVVLINRLH 199
>gi|242310638|ref|ZP_04809793.1| biopolymer transport protein exbb [Helicobacter pullorum MIT
98-5489]
gi|239523036|gb|EEQ62902.1| biopolymer transport protein exbb [Helicobacter pullorum MIT
98-5489]
Length = 140
Score = 85.6 bits (211), Expect = 4e-15, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVS-IPGIIESLISILLG 185
E+++ L+ + ++ S VG+LG V G++ F I + S + G+ +L + G
Sbjct: 33 ELSKNLTLIATIGSNAPYVGLLGTVFGIIMTFVQIGQSGMVDTTSIMTGLALALQATAGG 92
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQME 211
L V+IPS I YN + S+ + E
Sbjct: 93 LLVAIPSIIFYNLLMRKSEVLVAKWE 118
>gi|255531077|ref|YP_003091449.1| MotA/TolQ/ExbB proton channel [Pedobacter heparinus DSM 2366]
gi|255344061|gb|ACU03387.1| MotA/TolQ/ExbB proton channel [Pedobacter heparinus DSM 2366]
Length = 236
Score = 85.6 bits (211), Expect = 4e-15, Method: Composition-based stats.
Identities = 34/223 (15%), Positives = 89/223 (39%), Gaps = 22/223 (9%)
Query: 7 AIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRR----QFREFEQL 62
A ++ L ++ G ++ L + L + +++ + + + Q
Sbjct: 29 APPELHFIDLLLKGGW----VMLPLAFLAFLGLVIFVERYLTIRKASKTESNLMLQIRQY 84
Query: 63 FWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIA 122
G+ LE +L ++N LA + + + I+ ++
Sbjct: 85 IHEGR-LENAI-TLCRNNNSPLARMLEKGLKRIGRPIKD-----------IEAAIENNGK 131
Query: 123 RELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLIS 181
E+ ++ + + LG ++ ++G +G ++G++ F ++ + + +I G+ +I+
Sbjct: 132 LEVSKLEKNIGILGIIAGIAPMLGFVGTIIGVITIFHDVSIKGAIEIGTISGGLYTKMIT 191
Query: 182 ILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
GL + I + + Y+ ++ ++ME A EF +L
Sbjct: 192 SATGLIIGIIAYVLYHILNMMVERIILRMETDAIEFIDLLEEP 234
>gi|254424788|ref|ZP_05038506.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Synechococcus sp. PCC 7335]
gi|196192277|gb|EDX87241.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Synechococcus sp. PCC 7335]
Length = 233
Score = 85.6 bits (211), Expect = 5e-15, Method: Composition-based stats.
Identities = 34/195 (17%), Positives = 84/195 (43%), Gaps = 22/195 (11%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFIT--LRRQFREFEQLFWSGQ-SLETVCKSLKNHHNIGL 84
+ + S+L+ + ++++ F T LRR+ + ++ + SL+ ++ +
Sbjct: 1 MVPIVGASVLTVACALERA-TFWTDLLRREAKVVNEVLDKARTSLDEAAAIAARSRDLPI 59
Query: 85 AAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLL 144
++ ++ S D ++ A +E ++ + L ++ + L
Sbjct: 60 GRFLIAPLNLHNPSP-----------DSFRLALENAADKEFVKMRKGDKLLETVVAVAPL 108
Query: 145 VGILGAVLGMMGFFQSIAGYYSNNVV----SIPGIIESLISILLGLCVSIPSSIAYNKFI 200
+G+LG V+G++ F+++ S+ + + GI E+LI+ G+ V+I + +
Sbjct: 109 LGLLGTVIGLIRTFENLNIGGSDGAIGATEAAGGIGEALITTAAGMVVAILALLV---LR 165
Query: 201 EDSKKFAMQMEGFAN 215
A QM+ F+
Sbjct: 166 VMVTLQAQQMDYFSE 180
>gi|84490179|ref|YP_448411.1| biopolymer transport protein [Methanosphaera stadtmanae DSM 3091]
gi|84373498|gb|ABC57768.1| predicted biopolymer transport protein [Methanosphaera stadtmanae
DSM 3091]
Length = 280
Score = 85.6 bits (211), Expect = 5e-15, Method: Composition-based stats.
Identities = 37/204 (18%), Positives = 78/204 (38%), Gaps = 23/204 (11%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE-----QLFWSGQ 67
I ++F G+ V LL + + + ++K + G
Sbjct: 14 IISMFQSGGIIV----YLLTVIGLYGLFLALEKIWYLRKASEVDLSELMIVVNESMAHGG 69
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
SLE + ++ L+ I A+ +S + ++ M+ E+ +
Sbjct: 70 SLEALRAI--GNYKTPLSRIISEALKIGYRSKSE-----------VEDNMEQVFIVEMSK 116
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLC 187
+ + LS + ++ L+G++G VLGM F+ + G ++ + GI ++I+ + GL
Sbjct: 117 MMKGLSTIQTIIEMAPLLGLIGTVLGMWYTFKEL-GVSNDITLLANGIYIAIITTIFGLA 175
Query: 188 VSIPSSIAYNKFIEDSKKFAMQME 211
V+I Y + +E
Sbjct: 176 VAIILLPFYTYIKNKIEVQLDNIE 199
>gi|282859643|ref|ZP_06268745.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Prevotella bivia JCVIHMP010]
gi|282587561|gb|EFB92764.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Prevotella bivia JCVIHMP010]
Length = 281
Score = 85.6 bits (211), Expect = 5e-15, Method: Composition-based stats.
Identities = 33/200 (16%), Positives = 73/200 (36%), Gaps = 16/200 (8%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS---GQSLETVCKSLKNHHNIGL 84
++L+ I +L + I++ + ++F + + K L + +
Sbjct: 90 MSLVAIALVLGLAFCIERIIYLSLSEIDAKKFMARISNKIEAGDI-EGAKDLSRNTKGPV 148
Query: 85 AAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLL 144
A+I + S + I+R + + + + + S++ +
Sbjct: 149 ASICYQGLLRINDS-----------IENIERSVTSYGSVQSSNLEKGCSWITLFIAMAPS 197
Query: 145 VGILGAVLGMMGFFQSIAGYYS-NNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDS 203
+G LG V+GM+ F I N + G+ +LI+ + G+ V++ I YN +
Sbjct: 198 LGFLGTVIGMVMAFDQIQQVGDINPTIVAAGMKVALITTIFGIIVALVLMIFYNYILSKI 257
Query: 204 KKFAMQMEGFANEFSAILSR 223
+ QME +
Sbjct: 258 EHITAQMEESVITLLDAIME 277
>gi|59713376|ref|YP_206151.1| TolQ protein [Vibrio fischeri ES114]
gi|59481624|gb|AAW87263.1| TolQ protein [Vibrio fischeri ES114]
Length = 451
Score = 85.6 bits (211), Expect = 5e-15, Method: Composition-based stats.
Identities = 25/110 (22%), Positives = 53/110 (48%), Gaps = 1/110 (0%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-V 169
+ ++ + I E + + + LS L +++ ++G+LG V GM+ FQ I + + +
Sbjct: 326 EALELRLLETIVDEQQGLEKGLSMLKLLAALAPMLGLLGTVTGMIETFQVITLFGNGDPK 385
Query: 170 VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
V GI +L++ +LGL ++P + +N ++ +E A
Sbjct: 386 VMAGGISMALVTTVLGLVAAMPLLLTHNILSSQAESIRTILEKQGLGLVA 435
>gi|87308723|ref|ZP_01090862.1| probable TolQ-type transport protein [Blastopirellula marina DSM
3645]
gi|87288434|gb|EAQ80329.1| probable TolQ-type transport protein [Blastopirellula marina DSM
3645]
Length = 279
Score = 85.6 bits (211), Expect = 5e-15, Method: Composition-based stats.
Identities = 27/117 (23%), Positives = 56/117 (47%), Gaps = 2/117 (1%)
Query: 112 RIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVS 171
+++ ++ ++A + + K+ +L + + +VG+LG V GM+ FQ +A +
Sbjct: 151 GVEKALEDSVAEQSARLFRKIEYLSVIGNIAPMVGLLGTVTGMIFAFQQVASTQGAAGAA 210
Query: 172 --IPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
GI ++L++ + GL V+IPS A+ F + + A + L R+
Sbjct: 211 DLAEGIYQALVTTVGGLLVAIPSLGAFAVFRNWVDELVAECAYEAQQVFTPLKRRRR 267
>gi|189463877|ref|ZP_03012662.1| hypothetical protein BACINT_00210 [Bacteroides intestinalis DSM
17393]
gi|189438450|gb|EDV07435.1| hypothetical protein BACINT_00210 [Bacteroides intestinalis DSM
17393]
Length = 267
Score = 85.6 bits (211), Expect = 5e-15, Method: Composition-based stats.
Identities = 30/199 (15%), Positives = 76/199 (38%), Gaps = 18/199 (9%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE----TVCKSLKNHHNIG 83
++L+ I ++ + I++ + ++F + LE K + +
Sbjct: 73 MSLVAIALVIGLAFCIERIIYLSLAEINTKKFLAAIEAA--LEKGDVEAAKDIARNTRGP 130
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
+A+I+ + + D +++ + + + + S++ +
Sbjct: 131 IASIYYQGLLRIDQGL-----------DVVEKSVVSYGGVQAGYLEKGCSWITLFIAMAP 179
Query: 144 LVGILGAVLGMMGFFQSIAGYYS-NNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIED 202
+G LG V+GM+ F I + V G+ +LI+ + GL V++ + YN +
Sbjct: 180 SLGFLGTVIGMVQAFDKIQQVGDISPTVVAGGMKVALITTIFGLIVALILQVFYNYILSK 239
Query: 203 SKKFAMQMEGFANEFSAIL 221
+ +ME + ++
Sbjct: 240 IEALTSEMEDSSITLLDMV 258
>gi|163781926|ref|ZP_02176926.1| tolQ protein [Hydrogenivirga sp. 128-5-R1-1]
gi|159883146|gb|EDP76650.1| tolQ protein [Hydrogenivirga sp. 128-5-R1-1]
Length = 141
Score = 85.2 bits (210), Expect = 6e-15, Method: Composition-based stats.
Identities = 27/87 (31%), Positives = 43/87 (49%), Gaps = 1/87 (1%)
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYY-SNNVVSIPGIIESLISILLG 185
+T+ L + ++ + VG+LG VLG+M F S+ + N + G+ +L + +G
Sbjct: 51 RLTKGLHLIATVGANAPYVGLLGTVLGIMLTFYSVGSHGFVNTKEIMVGLALALKATAVG 110
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEG 212
L V+IPS I YN I K E
Sbjct: 111 LLVAIPSVIFYNLLIRRVKVLIALWEA 137
>gi|87311429|ref|ZP_01093549.1| probable biopolymer transport ExbB-related protein [Blastopirellula
marina DSM 3645]
gi|87285841|gb|EAQ77755.1| probable biopolymer transport ExbB-related protein [Blastopirellula
marina DSM 3645]
Length = 272
Score = 85.2 bits (210), Expect = 6e-15, Method: Composition-based stats.
Identities = 44/201 (21%), Positives = 91/201 (45%), Gaps = 17/201 (8%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLF----WSGQSLETVCKSLKNHHNIG 83
+ + + S L + +++++ T R R F + F GQ + +L +
Sbjct: 64 MYPIVLCSFLLLVFVFERAISLRTGRVIPRPFVKRFIEQVREGQIDQDQALALCEENRSP 123
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
+A +F +A+ +W +S + ++ I +R+ ++ L +S+
Sbjct: 124 VAEVFSAAVKKWGRSSVEVEQAIIDSGERVTNVLR-----------RYLRLFNGISTISP 172
Query: 144 LVGILGAVLGMMGFFQSIAGYYSN--NVVSIPGIIESLISILLGLCVSIPSSIAYNKFIE 201
L+G+LG VLGM+ F +IA + + GI ++L++ GL V++P+ IAY F+
Sbjct: 173 LLGLLGTVLGMIKAFNAIATADAMGRPELLAAGISQALLTTAAGLTVALPALIAYLFFVG 232
Query: 202 DSKKFAMQMEGFANEFSAILS 222
K M+++ E ++
Sbjct: 233 RVDKLVMEIDSLGQEVVNAIA 253
>gi|333029213|ref|ZP_08457274.1| MotA/TolQ/ExbB proton channel [Bacteroides coprosuis DSM 18011]
gi|332739810|gb|EGJ70292.1| MotA/TolQ/ExbB proton channel [Bacteroides coprosuis DSM 18011]
Length = 268
Score = 85.2 bits (210), Expect = 6e-15, Method: Composition-based stats.
Identities = 29/198 (14%), Positives = 77/198 (38%), Gaps = 16/198 (8%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG---QSLETVCKSLKNHHNIGL 84
++L+ I ++ + I++ + ++F + + +E K++ +
Sbjct: 74 MSLVAIALVIGLAFCIERIIYLSLAEINTKKFVESIEAALEKGDVEEA-KNIARDTRGPV 132
Query: 85 AAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLL 144
A+++ + + D +++ + + + + S++ +
Sbjct: 133 ASVYYQGLMRIDQG-----------IDVVEKSIVSYGGVQAGYLEKGCSWITLFIAMAPS 181
Query: 145 VGILGAVLGMMGFFQSIAGYYS-NNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDS 203
+G LG VLGM+ F I + V G+ +LI+ + GL V++ + YN +
Sbjct: 182 LGFLGTVLGMVMAFDKIQQVGDISPTVVAGGMKVALITTIFGLIVALILQVFYNYILAKI 241
Query: 204 KKFAMQMEGFANEFSAIL 221
+ +ME + ++
Sbjct: 242 ESITSEMEDSSVTLLDLI 259
>gi|227537430|ref|ZP_03967479.1| possible ligand gated channel protein TolQ [Sphingobacterium
spiritivorum ATCC 33300]
gi|300770839|ref|ZP_07080716.1| MotA/TolQ/ExbB proton channel family protein [Sphingobacterium
spiritivorum ATCC 33861]
gi|227242704|gb|EEI92719.1| possible ligand gated channel protein TolQ [Sphingobacterium
spiritivorum ATCC 33300]
gi|300762112|gb|EFK58931.1| MotA/TolQ/ExbB proton channel family protein [Sphingobacterium
spiritivorum ATCC 33861]
Length = 233
Score = 85.2 bits (210), Expect = 6e-15, Method: Composition-based stats.
Identities = 36/214 (16%), Positives = 85/214 (39%), Gaps = 20/214 (9%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS---GQS 68
++ L M+ G I+ + L + +++ + + S
Sbjct: 31 NLIQLLMKGGW----IMWPIAFLFFLGLVIFLERYITIRKASKFDNGLMSQIKSNVMSGK 86
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
L+ ++ N L+ + + R I+D I+ ++ E+ ++
Sbjct: 87 LDAAVAVCRS-SNTPLSRMLQKGL----------LRVGRPIKD-IEGAIENIGKIEVSKL 134
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLC 187
+ ++ LG ++ ++G +G + G++ F+ + ++ S+ G+ +IS GL
Sbjct: 135 EKNINILGIIAGIAPMLGFVGTIFGVIQIFRDVEAVGGIDIGSVSGGLYVKMISSASGLT 194
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
V I + I Y+ ++ ++ME A EF +L
Sbjct: 195 VGILAYIGYHALNMMVERLILRMETDAVEFIDLL 228
>gi|114048025|ref|YP_738575.1| MotA/TolQ/ExbB proton channel [Shewanella sp. MR-7]
gi|113889467|gb|ABI43518.1| MotA/TolQ/ExbB proton channel [Shewanella sp. MR-7]
Length = 451
Score = 85.2 bits (210), Expect = 7e-15, Method: Composition-based stats.
Identities = 26/110 (23%), Positives = 56/110 (50%), Gaps = 1/110 (0%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-V 169
+ ++ +D AI +E + ++S + +++ ++G+LG V GM+ FQSI + + +
Sbjct: 334 ETLELKLDEAILKETPALESRISIIKVLAAIAPMMGLLGTVTGMIATFQSIQLFGTGDPK 393
Query: 170 VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
+ GI +LI+ + GL ++P + + + SK +E + A
Sbjct: 394 LMAGGISMALITTVQGLVAALPLMLMHAIVVARSKSIVQVLEEQSAGIIA 443
>gi|78357197|ref|YP_388646.1| biopolymer transport protein ExbB-like [Desulfovibrio desulfuricans
subsp. desulfuricans str. G20]
gi|78219602|gb|ABB38951.1| outer membrane transport energization protein ExbB [Desulfovibrio
desulfuricans subsp. desulfuricans str. G20]
Length = 208
Score = 85.2 bits (210), Expect = 7e-15, Method: Composition-based stats.
Identities = 37/187 (19%), Positives = 71/187 (37%), Gaps = 19/187 (10%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAI 87
+ + FS W +I+ KS FIT R + + + +
Sbjct: 21 MVPIMAFSFAIWLIILLKSYWFITENRC---------EAAPADCLRTTPQEKCRCACWQ- 70
Query: 88 FMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGI 147
++ D +S D +++ R+ + ++ L +++ L+G+
Sbjct: 71 --------REIADAYIQSKSDAPDLNRKLLHSLCVRQHAKTNRLIATLFILAAITPLLGL 122
Query: 148 LGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKF 206
LG V GM+ F I+ + + N GI E+L++ GL +IP + + K
Sbjct: 123 LGTVSGMISTFNVISQFGTGNARALASGISEALVTTQSGLVAAIPGLLMAAILARRADKM 182
Query: 207 AMQMEGF 213
+ME F
Sbjct: 183 KKRMEMF 189
>gi|315453622|ref|YP_004073892.1| TonB-system energizer ExbB [Helicobacter felis ATCC 49179]
gi|315132674|emb|CBY83302.1| TonB-system energizer ExbB [Helicobacter felis ATCC 49179]
Length = 156
Score = 85.2 bits (210), Expect = 7e-15, Method: Composition-based stats.
Identities = 21/89 (23%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVS-IPGIIESLISILLGL 186
+ +L+ + ++ S +G+LG V G+M F + S + + + G+ +L + +GL
Sbjct: 54 LHRRLTLVATIGSNAPYIGLLGTVTGIMITFIELGSTGSVDTKAIMVGLALALKATGMGL 113
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFAN 215
V+IPS + YN + S+ + + + +
Sbjct: 114 IVAIPSVVIYNMLVRKSEIIVTKWDIYHH 142
>gi|304320856|ref|YP_003854499.1| TonB system biopolymer transport component [Parvularcula
bermudensis HTCC2503]
gi|303299758|gb|ADM09357.1| TonB system biopolymer transport component [Parvularcula
bermudensis HTCC2503]
Length = 459
Score = 85.2 bits (210), Expect = 7e-15, Method: Composition-based stats.
Identities = 31/111 (27%), Positives = 58/111 (52%), Gaps = 1/111 (0%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
+ + +D AI REL ++ L+ + +++ L+G+LG V+GM+ FQ I + + +
Sbjct: 343 IETLQLKLDDAILRELPKLEGGLNLVKVLAAIAPLMGLLGTVVGMIVTFQQITLFGTGDP 402
Query: 170 -VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
+ GI ++L++ +LGL SIP + + +K A +E A A
Sbjct: 403 QIMAGGISQALVTTVLGLIASIPLLLLHAFASGSAKSVAQTLEEQAAGMIA 453
>gi|160889237|ref|ZP_02070240.1| hypothetical protein BACUNI_01658 [Bacteroides uniformis ATCC 8492]
gi|156861244|gb|EDO54675.1| hypothetical protein BACUNI_01658 [Bacteroides uniformis ATCC 8492]
Length = 267
Score = 85.2 bits (210), Expect = 7e-15, Method: Composition-based stats.
Identities = 30/199 (15%), Positives = 76/199 (38%), Gaps = 18/199 (9%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE----TVCKSLKNHHNIG 83
++L+ I ++ + I++ + ++F + LE K + +
Sbjct: 73 MSLVAIALVIGLAFCIERIIYLSLAEINTKKFLAAIEAA--LEKGDVEAAKDIARNTRGP 130
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
+A+I+ + + D +++ + + + + S++ +
Sbjct: 131 IASIYYQGLMRIDQG-----------IDVVEKSVVSYGGVQAGYLEKGCSWITLFIAMAP 179
Query: 144 LVGILGAVLGMMGFFQSIAGYYS-NNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIED 202
+G LG V+GM+ F I + V G+ +LI+ + GL V++ + YN +
Sbjct: 180 SLGFLGTVIGMVQAFDKIQQVGDISPTVVAGGMKVALITTIFGLIVALILQVFYNYILAK 239
Query: 203 SKKFAMQMEGFANEFSAIL 221
+ +ME + ++
Sbjct: 240 IEALTSEMEDSSISLLDMV 258
>gi|332300737|ref|YP_004442658.1| MotA/TolQ/ExbB proton channel [Porphyromonas asaccharolytica DSM
20707]
gi|332177800|gb|AEE13490.1| MotA/TolQ/ExbB proton channel [Porphyromonas asaccharolytica DSM
20707]
Length = 275
Score = 84.9 bits (209), Expect = 8e-15, Method: Composition-based stats.
Identities = 31/196 (15%), Positives = 73/196 (37%), Gaps = 14/196 (7%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLET--VCKSLKNHHNIGLA 85
+ L+ + IL + +++ + + F + + K + + +A
Sbjct: 83 MALIALVLILGLVLCLERIIYLNLADNNYEAFLRKLEEALNRGDMNGAKEIARNTRGPVA 142
Query: 86 AIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLV 145
+I A+ + + D ++R + + + + LS++ + +
Sbjct: 143 SIAYQALMRFDQG-----------IDVVERSIVSYGGVQGGLLEKNLSWITLFIAIAPSL 191
Query: 146 GILGAVLGMMGFFQSIAGYYS-NNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSK 204
G LG V+GM+ F I + V G+ +LI+ + GL V++ + YN + +
Sbjct: 192 GFLGTVVGMVMAFDKIEKVGDISPTVVAGGMKVALITTIGGLIVAMILQVFYNYILSKVE 251
Query: 205 KFAMQMEGFANEFSAI 220
+ME +
Sbjct: 252 SILNRMEDASITLVDF 267
>gi|189218931|ref|YP_001939572.1| MotA/TolQ/ExbB proton channel family protein [Methylacidiphilum
infernorum V4]
gi|189185789|gb|ACD82974.1| MotA/TolQ/ExbB proton channel family protein [Methylacidiphilum
infernorum V4]
Length = 227
Score = 84.9 bits (209), Expect = 8e-15, Method: Composition-based stats.
Identities = 38/194 (19%), Positives = 82/194 (42%), Gaps = 19/194 (9%)
Query: 32 FIFSILSWSVIIQKSVNFITLR----RQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAI 87
+ SI+ ++I+++S + + + + E+L W + L L+ +
Sbjct: 33 ILCSIVGLAIILERSFSLRRSKIIPKKLVKAIEELGWGENP--EPIEKLCQDQKSPLSRL 90
Query: 88 FMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGI 147
+ S + + + V E+ ++ + L L + G L+G+
Sbjct: 91 VYLCLQNMSWSKYENS-----------EALQVKARAEIAQLEKGLVILEIIVGIGPLLGL 139
Query: 148 LGAVLGMMGFFQSIA--GYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKK 205
LG + G++ F ++ G + GI E+L + GL +++P IA++ F +
Sbjct: 140 LGTLSGLITIFGNVGVHGMATQGAAIAHGISEALHTTFAGLGIAVPCLIAHSLFTRKVEA 199
Query: 206 FAMQMEGFANEFSA 219
+A++ME +EF A
Sbjct: 200 YAVEMETLCSEFLA 213
>gi|224536144|ref|ZP_03676683.1| hypothetical protein BACCELL_01010 [Bacteroides cellulosilyticus
DSM 14838]
gi|224522226|gb|EEF91331.1| hypothetical protein BACCELL_01010 [Bacteroides cellulosilyticus
DSM 14838]
Length = 267
Score = 84.9 bits (209), Expect = 8e-15, Method: Composition-based stats.
Identities = 30/199 (15%), Positives = 75/199 (37%), Gaps = 18/199 (9%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE----TVCKSLKNHHNIG 83
++L+ I ++ + I++ + ++F + LE K +
Sbjct: 73 MSLVAIALVIGLAFCIERIIYLSLAEINTKKFLAAIEAA--LEKGDVEAAKDIARSTRGP 130
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
+A+I+ + + D +++ + + + + S++ +
Sbjct: 131 IASIYYQGLLRIDQGL-----------DVVEKSVVSYGGVQAGYLEKGCSWITLFIAMAP 179
Query: 144 LVGILGAVLGMMGFFQSIAGYYS-NNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIED 202
+G LG V+GM+ F I + V G+ +LI+ + GL V++ + YN +
Sbjct: 180 SLGFLGTVIGMVQAFDKIQQVGDISPTVVAGGMKVALITTIFGLIVALILQVFYNYILSK 239
Query: 203 SKKFAMQMEGFANEFSAIL 221
+ +ME + ++
Sbjct: 240 IEALTSEMEDSSITLLDMV 258
>gi|94501054|ref|ZP_01307578.1| Biopolymer transport protein [Oceanobacter sp. RED65]
gi|94426801|gb|EAT11785.1| Biopolymer transport protein [Oceanobacter sp. RED65]
Length = 221
Score = 84.9 bits (209), Expect = 8e-15, Method: Composition-based stats.
Identities = 35/218 (16%), Positives = 99/218 (45%), Gaps = 19/218 (8%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFR-EFEQLFW--SGQS 68
+I F G+ + I +L ++ ++ I++ ++ + +R R FE+L +
Sbjct: 3 TIIRFFQDGGMFMYPIAVIL----VVGLAIAIERLLSISSAKRSNRSAFEELLPMIQRKD 58
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
++ S N +N +A+IF + ++ S + + I+ M+ + + ++
Sbjct: 59 YKSAL-SYANQNNSDVASIFAAGIARMPSSTKR---------EDIEYAMEEGLMETIPKL 108
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI--PGIIESLISILLGL 186
++ ++ ++++ L+G+LG ++G++ F ++A + ++ I ++ + GL
Sbjct: 109 EKRTPYIATLANISTLMGLLGTIIGLIAAFTAVASAAPSEKATLLSQSISVAMNTTAFGL 168
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+IP + + + + +E +F I++ +
Sbjct: 169 ISAIPLLLVHTVLQSRTAEIIDSLEMAGVKFLNIITER 206
>gi|299141406|ref|ZP_07034543.1| MotA/TolQ/ExbB proton channel family protein [Prevotella oris C735]
gi|298577366|gb|EFI49235.1| MotA/TolQ/ExbB proton channel family protein [Prevotella oris C735]
Length = 260
Score = 84.9 bits (209), Expect = 8e-15, Method: Composition-based stats.
Identities = 30/201 (14%), Positives = 77/201 (38%), Gaps = 18/201 (8%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFI----TLRRQFREFEQLFWSGQSLETVCKSLKNHHNIG 83
++L+ + ++ + I++ + ++ + ++ G K L
Sbjct: 66 MSLVALALVIGLAFCIERIIYLSLSEINAKKFMTDLDERIMKGDI--EGAKKLCRDTRGP 123
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
+A+I + +S D I+R + + + + + S++ +
Sbjct: 124 VASICYQGLERVHES-----------IDNIERSVVSYGSVQAANLEKGCSWITLFIAMAP 172
Query: 144 LVGILGAVLGMMGFFQSIAGYYS-NNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIED 202
+G LG V+GM+ F I + + G+ +L++ + G+ V++ + YN +
Sbjct: 173 SLGFLGTVIGMVMAFDQIQTAGDISPTIVASGMKVALLTTIFGIIVALILQVFYNYILSK 232
Query: 203 SKKFAMQMEGFANEFSAILSR 223
+ QME A ++ +
Sbjct: 233 IEHITSQMEESAITLLDVVMK 253
>gi|284097747|ref|ZP_06385748.1| MotA/TolQ/ExbB proton channel [Candidatus Poribacteria sp. WGA-A3]
gi|283830743|gb|EFC34852.1| MotA/TolQ/ExbB proton channel [Candidatus Poribacteria sp. WGA-A3]
Length = 133
Score = 84.9 bits (209), Expect = 8e-15, Method: Composition-based stats.
Identities = 25/110 (22%), Positives = 52/110 (47%), Gaps = 1/110 (0%)
Query: 114 DRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYY-SNNVVSI 172
++ M+ E+ + L ++ + L+G+LG ++GM+ F +A +
Sbjct: 16 EKAMEATGLVEVSRMKRGFPSLDTIITLSPLLGLLGTIIGMIDSFGIMAIEGMGSPHAVT 75
Query: 173 PGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
G+ E+LI G+ V++ + I YN F+ ++ Q+E +A + L
Sbjct: 76 GGVAEALICTAGGITVAVLALIPYNYFVARTENITEQIEHYATRTESALQ 125
>gi|270295971|ref|ZP_06202171.1| conserved hypothetical protein [Bacteroides sp. D20]
gi|270273375|gb|EFA19237.1| conserved hypothetical protein [Bacteroides sp. D20]
Length = 267
Score = 84.9 bits (209), Expect = 9e-15, Method: Composition-based stats.
Identities = 30/199 (15%), Positives = 76/199 (38%), Gaps = 18/199 (9%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE----TVCKSLKNHHNIG 83
++L+ I ++ + I++ + ++F + LE K + +
Sbjct: 73 MSLVAIALVIGLAFCIERIIYLSLAEINTKKFLAAIEAA--LEKGDVEAAKDIARNTRGP 130
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
+A+I+ + + D +++ + + + + S++ +
Sbjct: 131 IASIYYQGLMRIDQG-----------IDVVEKSVVSYGGVQAGYLEKGCSWITLFIAMAP 179
Query: 144 LVGILGAVLGMMGFFQSIAGYYS-NNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIED 202
+G LG V+GM+ F I + V G+ +LI+ + GL V++ + YN +
Sbjct: 180 SLGFLGTVIGMVQAFDKIQQVGDISPTVVAGGMKVALITTIFGLIVALILQVFYNYILAK 239
Query: 203 SKKFAMQMEGFANEFSAIL 221
+ +ME + ++
Sbjct: 240 IEALTSEMEDSSISLLDMV 258
>gi|71279554|ref|YP_270422.1| MotA/TolQ/ExbB proton channel family protein [Colwellia
psychrerythraea 34H]
gi|71145294|gb|AAZ25767.1| MotA/TolQ/ExbB proton channel family [Colwellia psychrerythraea
34H]
Length = 449
Score = 84.9 bits (209), Expect = 9e-15, Method: Composition-based stats.
Identities = 37/198 (18%), Positives = 89/198 (44%), Gaps = 27/198 (13%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAI 87
IT+L IF ++ + +++ + + + + E+ +L+ K + N L +
Sbjct: 275 ITVLLIFGVI---IALERLIVLGGMSSKIKSQEK------NLD------KPNENNPLGRL 319
Query: 88 FMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGI 147
+S D + ++ +D AI RE ++ ++ + ++ L+G+
Sbjct: 320 LKVFYD--NQSVDA---------ETLELKLDEAILRETPKVDRGINLIKMFAAIAPLMGL 368
Query: 148 LGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIPSSIAYNKFIEDSKKF 206
LG V+GM+ FQ+I + + + + G I +L++ LGL ++P + ++ SK
Sbjct: 369 LGTVIGMIMTFQTITLFGTGDPKIMAGNISLALVTTALGLICALPLILIHSVVAGKSKSV 428
Query: 207 AMQMEGFANEFSAILSRQ 224
+++ + A ++ +
Sbjct: 429 LQKLDEQSAGLIAAIAEK 446
>gi|113970798|ref|YP_734591.1| MotA/TolQ/ExbB proton channel [Shewanella sp. MR-4]
gi|113885482|gb|ABI39534.1| MotA/TolQ/ExbB proton channel [Shewanella sp. MR-4]
Length = 451
Score = 84.9 bits (209), Expect = 9e-15, Method: Composition-based stats.
Identities = 26/110 (23%), Positives = 56/110 (50%), Gaps = 1/110 (0%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-V 169
+ ++ +D AI +E + ++S + +++ ++G+LG V GM+ FQSI + + +
Sbjct: 334 ETLELKLDEAILKETPALESRISIIKVLAAIAPMMGLLGTVTGMIATFQSIQLFGTGDPK 393
Query: 170 VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
+ GI +LI+ + GL ++P + + + SK +E + A
Sbjct: 394 LMAGGISMALITTVQGLVAALPLMLMHAVVVARSKSIVQVLEEQSAGIIA 443
>gi|117921066|ref|YP_870258.1| MotA/TolQ/ExbB proton channel [Shewanella sp. ANA-3]
gi|117613398|gb|ABK48852.1| MotA/TolQ/ExbB proton channel [Shewanella sp. ANA-3]
Length = 451
Score = 84.9 bits (209), Expect = 9e-15, Method: Composition-based stats.
Identities = 26/110 (23%), Positives = 56/110 (50%), Gaps = 1/110 (0%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-V 169
+ ++ +D AI +E + ++S + +++ ++G+LG V GM+ FQSI + + +
Sbjct: 334 ETLELKLDEAILKETPALESRISIIKVLAAIAPMMGLLGTVTGMIATFQSIQLFGTGDPK 393
Query: 170 VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
+ GI +LI+ + GL ++P + + + SK +E + A
Sbjct: 394 LMAGGISMALITTVQGLVAALPLMLMHAVVVARSKSIVQVLEEQSAGIIA 443
>gi|42522992|ref|NP_968372.1| adventurous gliding motility protein R [Bdellovibrio bacteriovorus
HD100]
gi|39575197|emb|CAE79365.1| Adventurous gliding motility protein R [Bdellovibrio bacteriovorus
HD100]
Length = 236
Score = 84.9 bits (209), Expect = 9e-15, Method: Composition-based stats.
Identities = 39/212 (18%), Positives = 84/212 (39%), Gaps = 20/212 (9%)
Query: 17 FMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFIT-LRRQFREFEQLFWS---GQSLETV 72
FM V LL I S ++ +++ EF + + L+
Sbjct: 7 FMNDSGVVGW-FILLVG--IGSLVLVAERAKALYKEYGMNVDEFMGKVQNLVLAKKLDEA 63
Query: 73 CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKL 132
LA+ F + + + + D I + D+A++ + T++L
Sbjct: 64 LLLCAQLEKKPLASAFKTILEKADRDDDT-----------IFQAHDIALSENVPLYTKRL 112
Query: 133 SFLGSMSSAGLLVGILGAVLGMMGFFQSIAGY--YSNNVVSIPGIIESLISILLGLCVSI 190
+L +++ L+G+LG + G++ FQ++A + GI S+ + LGL V+I
Sbjct: 113 HYLSMLANVATLLGLLGTIHGLILSFQAVASADPAQKQALLAHGISVSMYTTALGLAVAI 172
Query: 191 PSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
P+ + ++ + M ++ + +L+
Sbjct: 173 PAMVFFSILTARQNELIEDMSEKCSKLTELLT 204
>gi|313886930|ref|ZP_07820633.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Porphyromonas asaccharolytica PR426713P-I]
gi|312923627|gb|EFR34433.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Porphyromonas asaccharolytica PR426713P-I]
Length = 265
Score = 84.9 bits (209), Expect = 9e-15, Method: Composition-based stats.
Identities = 31/196 (15%), Positives = 73/196 (37%), Gaps = 14/196 (7%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLET--VCKSLKNHHNIGLA 85
+ L+ + IL + +++ + + F + + K + + +A
Sbjct: 73 MALIALVLILGLVLCLERIIYLNLADNNYEAFLRKLEEALNRGDMNGAKEIARNTRGPVA 132
Query: 86 AIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLV 145
+I A+ + + D ++R + + + + LS++ + +
Sbjct: 133 SIAYQALMRFDQG-----------IDVVERSIVSYGGVQGGLLEKNLSWITLFIAIAPSL 181
Query: 146 GILGAVLGMMGFFQSIAGYYS-NNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSK 204
G LG V+GM+ F I + V G+ +LI+ + GL V++ + YN + +
Sbjct: 182 GFLGTVVGMVMAFDKIEKVGDISPTVVAGGMKVALITTIGGLIVAMILQVFYNYILSKVE 241
Query: 205 KFAMQMEGFANEFSAI 220
+ME +
Sbjct: 242 SILNRMEDASITLVDF 257
>gi|254483608|ref|ZP_05096831.1| transporter, MotA/TolQ/ExbB proton channel family, putative [marine
gamma proteobacterium HTCC2148]
gi|214036117|gb|EEB76801.1| transporter, MotA/TolQ/ExbB proton channel family, putative [marine
gamma proteobacterium HTCC2148]
Length = 122
Score = 84.9 bits (209), Expect = 9e-15, Method: Composition-based stats.
Identities = 24/110 (21%), Positives = 55/110 (50%), Gaps = 1/110 (0%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-V 169
+ ++ + + +E ++ L+ L +++ L+G+LG V GM+ FQ+I + + +
Sbjct: 4 ETLELKLSEGVLKETPKLESGLTLLKIIAAVAPLMGLLGTVTGMIITFQAITIFGAGDPK 63
Query: 170 VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
GI +LI+ +LGL V+IP+ + + +++ ++ A
Sbjct: 64 AMAGGISGALITTVLGLLVAIPTVLLHTVVNGRAQRIIHILDEQTTGMIA 113
>gi|254477892|ref|ZP_05091277.1| MotA/TolQ/ExbB proton channel family domain protein [Ruegeria sp.
R11]
gi|214028477|gb|EEB69313.1| MotA/TolQ/ExbB proton channel family domain protein [Ruegeria sp.
R11]
Length = 217
Score = 84.9 bits (209), Expect = 9e-15, Method: Composition-based stats.
Identities = 37/197 (18%), Positives = 73/197 (37%), Gaps = 26/197 (13%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITL---RRQFREFEQLFWSGQSL 69
+ AL+ G V LL S++ SV++ K F + W
Sbjct: 9 LLALYDLGGPVV----LLLCGLSVIVLSVVLYKLWQFAAAGVGKHHHLHLAATDWDQGKR 64
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+ + L+ + A + M+ E + S ++ +
Sbjct: 65 DDALRHLEKSSSYLAAVMGMAVEGEAEFSR-----------------LEAEAETRFARLE 107
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGLC 187
L S++ L+G+ G VLGM+ FQ++ AG + + GI +L++ +GL
Sbjct: 108 RGFRLLDSVAQLAPLLGLFGTVLGMITAFQALQEAGAQVDPSILAGGIWVALLTTAVGLA 167
Query: 188 VSIPSSIAYNKFIEDSK 204
V++P+++ +
Sbjct: 168 VAMPTAVLLSILESRMD 184
>gi|192358852|ref|YP_001983769.1| adventurous gliding motility protein R [Cellvibrio japonicus
Ueda107]
gi|190685017|gb|ACE82695.1| adventurous gliding motility protein R [Cellvibrio japonicus
Ueda107]
Length = 231
Score = 84.9 bits (209), Expect = 9e-15, Method: Composition-based stats.
Identities = 26/200 (13%), Positives = 79/200 (39%), Gaps = 15/200 (7%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQL---FWSGQSLETVCKSLKNHHNIGL 84
+ + I ++ ++ I++ + + R+ + V L +
Sbjct: 20 MYPIAIVLVVGIAIAIERWLVLTAAKSANRQAFNRILPLLHKKDYAGVIN-LSKSTGAPI 78
Query: 85 AAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLL 144
A I + + +S + D I+ M+ + + + ++ ++L ++++ L
Sbjct: 79 ARIIAAGVVRMSQSPRR---------DDIELAMEEGVMEAMPRLEKRTAYLATLANISTL 129
Query: 145 VGILGAVLGMMGFFQSIAGYYSNNVVSI--PGIIESLISILLGLCVSIPSSIAYNKFIED 202
+G+LG ++G++ F ++A ++ I ++ + GL +IP + ++
Sbjct: 130 LGLLGTIIGLIAAFTAVANADPAEKAALLSSSIAVAMNTTAFGLISAIPLLLIHSMLQSK 189
Query: 203 SKKFAMQMEGFANEFSAILS 222
+ + +E + I++
Sbjct: 190 TTEIIDSLEMAGVKCLNIIA 209
>gi|313148977|ref|ZP_07811170.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
gi|313137744|gb|EFR55104.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
Length = 265
Score = 84.5 bits (208), Expect = 9e-15, Method: Composition-based stats.
Identities = 30/199 (15%), Positives = 75/199 (37%), Gaps = 18/199 (9%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQFREF----EQLFWSGQSLETVCKSLKNHHNIG 83
++L+ I ++ + I++ + ++F E G K + +
Sbjct: 71 MSLVAIALVIGLAFCIERIIYLSLAEINTKKFMSSIEAALEKGDV--EAAKDIARNTRGP 128
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
+A+I+ + + D +++ + + + + S++ +
Sbjct: 129 VASIYYQGLMRIDQG-----------IDVVEKSVVSYGGVQAGYLEKGCSWITLFIAMAP 177
Query: 144 LVGILGAVLGMMGFFQSIAGYYS-NNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIED 202
+G LG V+GM+ F I + V G+ +LI+ + GL V++ + YN +
Sbjct: 178 SLGFLGTVVGMVMAFDKIQQQGDISPTVVAGGMKVALITTIFGLVVALILQVFYNYILAK 237
Query: 203 SKKFAMQMEGFANEFSAIL 221
+ +ME + ++
Sbjct: 238 IEALTSEMEDSSISLLDMV 256
>gi|317479591|ref|ZP_07938718.1| MotA/TolQ/ExbB proton channel family protein [Bacteroides sp.
4_1_36]
gi|316904253|gb|EFV26080.1| MotA/TolQ/ExbB proton channel family protein [Bacteroides sp.
4_1_36]
Length = 267
Score = 84.5 bits (208), Expect = 9e-15, Method: Composition-based stats.
Identities = 30/199 (15%), Positives = 76/199 (38%), Gaps = 18/199 (9%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE----TVCKSLKNHHNIG 83
++L+ I ++ + I++ + ++F + LE K + +
Sbjct: 73 MSLVAIALVIGLAFCIERIIYLSLAEINTKKFLAAIEAA--LEKGDVEAAKDIARNTRGP 130
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
+A+I+ + + D +++ + + + + S++ +
Sbjct: 131 IASIYYQGLMRIDQG-----------IDVVEKSVVSYGGVQAGYLEKGCSWITLFIAMAP 179
Query: 144 LVGILGAVLGMMGFFQSIAGYYS-NNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIED 202
+G LG V+GM+ F I + V G+ +LI+ + GL V++ + YN +
Sbjct: 180 SLGFLGTVIGMVQAFDKIQQVGDISPTVVAGGMKVALITTIFGLIVALILQVFYNYILAK 239
Query: 203 SKKFAMQMEGFANEFSAIL 221
+ +ME + ++
Sbjct: 240 IEALTSEMEDSSISLLDMV 258
>gi|149193989|ref|ZP_01871087.1| exbb\tolq family transport protein [Caminibacter mediatlanticus
TB-2]
gi|149135942|gb|EDM24420.1| exbb\tolq family transport protein [Caminibacter mediatlanticus
TB-2]
Length = 182
Score = 84.5 bits (208), Expect = 1e-14, Method: Composition-based stats.
Identities = 19/93 (20%), Positives = 45/93 (48%), Gaps = 1/93 (1%)
Query: 118 DVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIE 177
D I ++ L FL ++S +G+ G V+G++ F + + N++ P I +
Sbjct: 81 DACIEGARKKANNGLVFLSIVASTAPFIGLFGTVVGILNAFAGMQSVTTINMI-APAIAD 139
Query: 178 SLISILLGLCVSIPSSIAYNKFIEDSKKFAMQM 210
+LI+ +G+ V++P+ + + + + +
Sbjct: 140 ALIATAIGIIVAVPAYTFHQILSKKVEDLILTL 172
>gi|228470105|ref|ZP_04055014.1| MotA/TolQ/ExbB proton channel family protein [Porphyromonas uenonis
60-3]
gi|228308243|gb|EEK17098.1| MotA/TolQ/ExbB proton channel family protein [Porphyromonas uenonis
60-3]
Length = 267
Score = 84.5 bits (208), Expect = 1e-14, Method: Composition-based stats.
Identities = 32/196 (16%), Positives = 73/196 (37%), Gaps = 14/196 (7%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLET--VCKSLKNHHNIGLA 85
+ L+ + IL + +++ + + F + + K + + +A
Sbjct: 75 MALIALVLILGLVLCLERIIYLNLADNNYEAFLRKLEEALNRGDMNGAKEIARNTRGPVA 134
Query: 86 AIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLV 145
+I A+ + + D ++R + + + + LS++ + +
Sbjct: 135 SIAYQALMRFDQG-----------IDVVERSIVSYGGVQGGLLEKNLSWITLFIAIAPSL 183
Query: 146 GILGAVLGMMGFFQSIAGYYS-NNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSK 204
G LG V+GM+ F I + V G+ +LI+ + GL V++ I YN + +
Sbjct: 184 GFLGTVVGMVMAFDKIEKVGDISPTVVAGGMKVALITTIGGLIVAMILQIFYNYILSKVE 243
Query: 205 KFAMQMEGFANEFSAI 220
+ME +
Sbjct: 244 SILNRMEDASITLVDF 259
>gi|226355172|ref|YP_002784912.1| MotA/TolQ/ExbB proton channel family protein [Deinococcus deserti
VCD115]
gi|226317162|gb|ACO45158.1| putative MotA/TolQ/ExbB proton channel family protein [Deinococcus
deserti VCD115]
Length = 232
Score = 84.5 bits (208), Expect = 1e-14, Method: Composition-based stats.
Identities = 36/174 (20%), Positives = 69/174 (39%), Gaps = 7/174 (4%)
Query: 46 SVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAM-SEWKKSCDKGAR 104
++ +RR ++ L +++ + ++ LA + SA + + G
Sbjct: 29 AMRIQAMRRLGQDASALIERARAI-----TAESGPAAALAEVDRSAHPAPAVQVLRAGLH 83
Query: 105 SPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGY 164
D M A+ E + LS L + + L+G+LG V+GM+ F +
Sbjct: 84 RADRGPDAAVSAMQSALLAEDSRLYAGLSALSTAAQVAPLLGLLGTVIGMVRSFLVFSQT 143
Query: 165 YS-NNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEF 217
+ GI E+L++ GL V+I + +A N + + A Q E +
Sbjct: 144 SAPTPAQLATGISEALVNTAAGLVVAIIAYVARNALRARADRIATQAERVREDL 197
>gi|167624642|ref|YP_001674936.1| MotA/TolQ/ExbB proton channel [Shewanella halifaxensis HAW-EB4]
gi|167354664|gb|ABZ77277.1| MotA/TolQ/ExbB proton channel [Shewanella halifaxensis HAW-EB4]
Length = 451
Score = 84.5 bits (208), Expect = 1e-14, Method: Composition-based stats.
Identities = 37/204 (18%), Positives = 84/204 (41%), Gaps = 29/204 (14%)
Query: 17 FMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSL 76
G I+ LL + +++S I++ + + + + + L
Sbjct: 268 IEAGGTIGYIIMALLALGALIS----IERLITLGVVGAKVKAQRKH-------------L 310
Query: 77 KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLG 136
N N L + + ++ + D + ++ +D AI +E + ++S +
Sbjct: 311 DNPGNNPLGRVLKA----YQDNKDVDV-------ETLELKLDEAILKETPALESRISIIK 359
Query: 137 SMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-VVSIPGIIESLISILLGLCVSIPSSIA 195
+++ ++G+LG V GM+ FQSI + + + + GI +L++ + GL ++P +
Sbjct: 360 VLAAIAPMMGLLGTVTGMIATFQSIQLFGTGDPKLMAGGISMALMTTVQGLVAALPLMLM 419
Query: 196 YNKFIEDSKKFAMQMEGFANEFSA 219
+ I SK +E + A
Sbjct: 420 HAVVIARSKSIVQILEEQSAGIVA 443
>gi|291287014|ref|YP_003503830.1| MotA/TolQ/ExbB proton channel [Denitrovibrio acetiphilus DSM 12809]
gi|290884174|gb|ADD67874.1| MotA/TolQ/ExbB proton channel [Denitrovibrio acetiphilus DSM 12809]
Length = 205
Score = 84.5 bits (208), Expect = 1e-14, Method: Composition-based stats.
Identities = 44/219 (20%), Positives = 93/219 (42%), Gaps = 15/219 (6%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
++D + L + G+ + + S+L+ +V +++ V T R ++
Sbjct: 1 MLDFN-MELIQKGGVL----MYPIIFLSVLALAVFLERLVTLRTSRYVPALLKEK----- 50
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
++ ++ I + SA++ K P+ R+ ++ + +
Sbjct: 51 -IKQALQNNDTKEAISMCEKDGSALANVCTDLLKNLDLPL---QRLMETVEESGRFQSNR 106
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVS-IPGIIESLISILLGL 186
+T L L +++S L+G+LG VLGM+ F I N + GI E+LI+ GL
Sbjct: 107 LTRFLPTLQAIASIAPLLGLLGTVLGMIKTFIVIGQQGVGNAQALAGGISEALITTAAGL 166
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
V+IP+ + Y S + +++E +E + ++
Sbjct: 167 SVAIPTVVFYYIVRFRSDRVMIELERAVSEIINQIFKEA 205
>gi|319956205|ref|YP_004167468.1| cell division and transport-associated protein tolq [Nitratifractor
salsuginis DSM 16511]
gi|319418609|gb|ADV45719.1| Cell division and transport-associated protein TolQ [Nitratifractor
salsuginis DSM 16511]
Length = 192
Score = 84.5 bits (208), Expect = 1e-14, Method: Composition-based stats.
Identities = 33/209 (15%), Positives = 76/209 (36%), Gaps = 26/209 (12%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLET 71
S+ + F ++ +L + I ++ + I + + ++L +SL
Sbjct: 3 SLSSYFAHSSPITWMVLLILSFYFIATFWIFIYRYRLIL---------QRLAIESRSLTR 53
Query: 72 VCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEK 131
+ + ++ G SP ++ A+ + T
Sbjct: 54 LYM---GRSEMVSDDSLLAGY-----LRQIGRVSPE--------VLKAAVNDAVRSATRG 97
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSI 190
L+ L M+S +G+ G V+G++ F + S ++ V P I E+LI+ G+ V++
Sbjct: 98 LTQLSIMASTSPFIGLFGTVVGILEAFGRLGTQKSASLSVVAPAISEALIATAAGIFVAV 157
Query: 191 PSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
+ + + + +E + A
Sbjct: 158 FAYAFHLLLKRKAYELQSLLESQSEIVLA 186
>gi|90023203|ref|YP_529030.1| ATPase [Saccharophagus degradans 2-40]
gi|89952803|gb|ABD82818.1| MotA/TolQ/ExbB proton channel [Saccharophagus degradans 2-40]
Length = 220
Score = 84.5 bits (208), Expect = 1e-14, Method: Composition-based stats.
Identities = 29/216 (13%), Positives = 82/216 (37%), Gaps = 19/216 (8%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQL---FWSGQS 68
+I + F + I +L ++ ++ I++ + + R +
Sbjct: 3 TIISFFQNGAEFMYPIALVL----VVGLAIAIERFIFLTNAKVSNRRAFDRILPLLRKKD 58
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
V L + I + ++ +++ + D I+ M+ + + +
Sbjct: 59 YGAVVD-LARQSKAPVGRIVAAGIARLQQTPRR---------DEIEYAMEEGVMEAVPRL 108
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGY--YSNNVVSIPGIIESLISILLGL 186
++ +L ++++ L+G+LG ++G++ F ++A + I ++ + GL
Sbjct: 109 EKRTPYLATLANIATLLGLLGTIMGLIEAFTAVANADPAVKATLLSNSISLAMNTTAFGL 168
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
V+IP + + + + +E + I+S
Sbjct: 169 IVAIPLLMLHAMLQSKTTEIVDSLEMAGVKCLNIMS 204
>gi|325104642|ref|YP_004274296.1| outer membrane transport energization protein ExbB [Pedobacter
saltans DSM 12145]
gi|324973490|gb|ADY52474.1| outer membrane transport energization protein ExbB [Pedobacter
saltans DSM 12145]
Length = 229
Score = 84.5 bits (208), Expect = 1e-14, Method: Composition-based stats.
Identities = 37/220 (16%), Positives = 90/220 (40%), Gaps = 20/220 (9%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG-- 66
++S+F L + G ++ L + ++L + ++ + + + S
Sbjct: 24 QELSLFELLSKGGW----VMIPLTLLALLGLIIFFERYLTIKKASKDESQLILQVKSSIK 79
Query: 67 -QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
+L++ K+ N L + + R I++ I+ ++ E+
Sbjct: 80 TGNLDSAIAICKS-SNSPLGRMLQKGL----------LRVGRPIKE-IEGSIENVGKLEV 127
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILL 184
++ + + LG ++ ++G +G ++G++ F ++ + +I G+ +IS
Sbjct: 128 SKLEKNVGILGIIAGIAPMLGFVGTIIGVITIFHDVSVKGIIEIGTISGGLYVKMISSAT 187
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
GL + I S + YN + K ++ME + EF +L
Sbjct: 188 GLIIGIVSYVFYNILMMMIDKVILKMETDSIEFIDLLEEP 227
>gi|254785766|ref|YP_003073195.1| MotA/TolQ/ExbB proton channel [Teredinibacter turnerae T7901]
gi|237684969|gb|ACR12233.1| MotA/TolQ/ExbB proton channel [Teredinibacter turnerae T7901]
Length = 205
Score = 84.5 bits (208), Expect = 1e-14, Method: Composition-based stats.
Identities = 25/201 (12%), Positives = 82/201 (40%), Gaps = 16/201 (7%)
Query: 29 TLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLF---WSGQSLETVCKSLKNHHNIGLA 85
+L + ++ ++ +++ + ++ + + + + + + LA
Sbjct: 16 AILAVMALG-LAIAVERLIYLLSTQSKTNSVWKKITPMLQANDIARAEHTASG-ASTPLA 73
Query: 86 AIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLV 145
+ S K + + + I+ M+ I + ++ E+ +L ++++ L+
Sbjct: 74 RVLAYGFSRKKNNAKR---------ELIESAMEEGIMEVVPQLEERTHYLATLANIATLL 124
Query: 146 GILGAVLGMMGFFQSIAGYYSNNVVSI--PGIIESLISILLGLCVSIPSSIAYNKFIEDS 203
G+LG ++G++ F ++A + I ++ + GLC +IP + ++ +
Sbjct: 125 GLLGTIIGLIQAFTAVASADPAEKADMLSASISVAMNTTAFGLCAAIPLILIHSYLATKT 184
Query: 204 KKFAMQMEGFANEFSAILSRQ 224
+ +E A + +++ +
Sbjct: 185 TRLVDNIEMAAVKCLNLMTEE 205
>gi|114563791|ref|YP_751304.1| MotA/TolQ/ExbB proton channel [Shewanella frigidimarina NCIMB 400]
gi|114335084|gb|ABI72466.1| MotA/TolQ/ExbB proton channel [Shewanella frigidimarina NCIMB 400]
Length = 451
Score = 84.5 bits (208), Expect = 1e-14, Method: Composition-based stats.
Identities = 26/110 (23%), Positives = 56/110 (50%), Gaps = 1/110 (0%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-V 169
+ ++ +D AI +E + ++S + +++ ++G+LG V GM+ FQSI + + +
Sbjct: 334 ETLELKLDEAILKETPALEARISIIKVIAAIAPMMGLLGTVTGMIATFQSIQLFGTGDPK 393
Query: 170 VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
+ GI +LI+ + GL ++P + + + SK +E + A
Sbjct: 394 LMAGGISMALITTVQGLIAALPLMLLHAIVVARSKSIVQVLEEQSAGIIA 443
>gi|189220361|ref|YP_001941001.1| biopolymer transport protein [Methylacidiphilum infernorum V4]
gi|189187219|gb|ACD84404.1| Biopolymer transport protein [Methylacidiphilum infernorum V4]
Length = 231
Score = 84.5 bits (208), Expect = 1e-14, Method: Composition-based stats.
Identities = 43/219 (19%), Positives = 90/219 (41%), Gaps = 17/219 (7%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
+ F++ G I+ + S+++ +VI ++ + + + R + + +
Sbjct: 1 MIQFFLKGGP----IMWPILALSVITLAVIFERLLFLVEITRNRKR--------KWVTQF 48
Query: 73 CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKL 132
+ + AI + K ++G + G + + A + +LE + L
Sbjct: 49 LELVGQERYEEALAIAGKSKDYVLKVLEEGLKHREGSLED---ALLEAASSQLERFNKGL 105
Query: 133 SFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI--PGIIESLISILLGLCVSI 190
L + + G L+G+LG V GMM F + G + G+ ESLI++ GL V+I
Sbjct: 106 VVLDTAVTLGPLLGLLGTVTGMMHAFSIVGGGEIAGKQAAITGGVAESLIAVSFGLAVAI 165
Query: 191 PSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNI 229
+ I N F ++ ++E + +L ++ E
Sbjct: 166 VAIIPLNFFNARMERARRRIEEASTRLVLLLKKEKEDQQ 204
>gi|320101782|ref|YP_004177373.1| MotA/TolQ/ExbB proton channel [Isosphaera pallida ATCC 43644]
gi|319749064|gb|ADV60824.1| MotA/TolQ/ExbB proton channel [Isosphaera pallida ATCC 43644]
Length = 345
Score = 84.5 bits (208), Expect = 1e-14, Method: Composition-based stats.
Identities = 37/204 (18%), Positives = 82/204 (40%), Gaps = 17/204 (8%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLF----WSGQSLETVCKSLKNHHNIG 83
+ LF SI + V+++++ R R+F Q F +G+ +
Sbjct: 131 LWPLFFCSIFTIGVVLERAFTLARGRVLPRDFVQRFLERLATGKLDRERALEFCRAQSSP 190
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
A IF A+ W K + + +++ A E+ E+ + L +++ G
Sbjct: 191 AARIFAIAVRHWGKPGWE-----------LRQIVASDAAAEIAELRRRTRTLSGLATLGP 239
Query: 144 LVGILGAVLGMMGFFQSIAGYYSNNV--VSIPGIIESLISILLGLCVSIPSSIAYNKFIE 201
L+G+LG V G++ F ++ G GI +L++ +GL +++ + A+ F
Sbjct: 240 LLGLLGTVWGLIESFGNLGGKVGTAKGDALAHGISLALVATAIGLVIAVIAVTAHTYFQY 299
Query: 202 DSKKFAMQMEGFANEFSAILSRQT 225
++ + +++ +
Sbjct: 300 RIDGLIRDLDARTRDVVDLIAGDS 323
>gi|307566447|ref|ZP_07628881.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Prevotella amnii CRIS 21A-A]
gi|307344835|gb|EFN90238.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Prevotella amnii CRIS 21A-A]
Length = 263
Score = 84.1 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 34/201 (16%), Positives = 75/201 (37%), Gaps = 18/201 (8%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQFREFE----QLFWSGQSLETVCKSLKNHHNIG 83
++L+ I +L + I++ + ++F + SG K L +
Sbjct: 72 MSLVAIALVLGLAFCIERIIYLSLSEIDAKKFMIDISKKIESGDI--DGAKDLSRNTKGP 129
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
+A+I + S + I+R + + + + + S++ + G
Sbjct: 130 VASICYQGLLRINDS-----------IENIERSVTSYGSVQSANLEKGCSWITLFIAMGP 178
Query: 144 LVGILGAVLGMMGFFQSIAGYYS-NNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIED 202
+G LG V+GM+ F I + + G+ +LI+ + G+ V++ + YN +
Sbjct: 179 SLGFLGTVIGMVMAFDQIQQIGDISPTIVASGMKVALITTIFGIIVALLLMVFYNYILSK 238
Query: 203 SKKFAMQMEGFANEFSAILSR 223
+ QME +
Sbjct: 239 IEHLTSQMEESVITLLDAIME 259
>gi|150024639|ref|YP_001295465.1| biopolymer transporter [Flavobacterium psychrophilum JIP02/86]
gi|149771180|emb|CAL42647.1| Putative biopolymer transporter [Flavobacterium psychrophilum
JIP02/86]
Length = 238
Score = 84.1 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 42/219 (19%), Positives = 86/219 (39%), Gaps = 20/219 (9%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFW---SG 66
+IS+ M+ G I L +F + VII++ + + + +
Sbjct: 29 EISVLGFIMKGGFF--LIPIALLLF--YTIYVIIERYLYLKKHTKYDTHLMKDIRIHLNS 84
Query: 67 QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
+E S + I +G + I+ M+ E+
Sbjct: 85 GHIEMAIASAEKDTTASGNVI------------KEGLHTIGRPIAEIESNMEKVANIEIG 132
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLG 185
++ ++L LG ++ +G +G + G++ F SI+ + ++ +I G+ E +IS G
Sbjct: 133 QMEQRLGHLGLIAGIAPTLGFIGTIGGVIKIFYSISITENISIGNISGGLYEKMISSGSG 192
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
L V + + AY+ F F++ ++ EF I+ R
Sbjct: 193 LIVGLVAYSAYHLFNGVIDSFSLNIQRHVLEFVNIIQRP 231
>gi|225164681|ref|ZP_03726920.1| MotA/TolQ/ExbB proton channel [Opitutaceae bacterium TAV2]
gi|224800720|gb|EEG19077.1| MotA/TolQ/ExbB proton channel [Opitutaceae bacterium TAV2]
Length = 202
Score = 84.1 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 37/217 (17%), Positives = 76/217 (35%), Gaps = 29/217 (13%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
M +I + L I L + S++ ++ ++ + SG+
Sbjct: 1 MFFAIIDIIKGADLL----IYPLALCSLILVFILFERGFALRRAAVLPDDLVDAVVSGEP 56
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ LA + A + P ++ E+ +
Sbjct: 57 -------GGGGQDSVLARVIAFA--------GRHPNDPDAVKAFAR--------LEVTRM 93
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYS--NNVVSIPGIIESLISILLGL 186
L +L + + L+G+ G V ++ F SI+G + V G+ +L + +LGL
Sbjct: 94 ERGLPYLDVIYTGAPLLGLTGTVWSLIRVFSSISGETGLPDPVKFTSGVSLALSATVLGL 153
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
++IP+ + + KFA Q++ A +R
Sbjct: 154 IIAIPALVGSGIYQRKVDKFAAQLDVLLERILAGQAR 190
>gi|238018324|ref|ZP_04598750.1| hypothetical protein VEIDISOL_00148 [Veillonella dispar ATCC 17748]
gi|237864795|gb|EEP66085.1| hypothetical protein VEIDISOL_00148 [Veillonella dispar ATCC 17748]
Length = 201
Score = 84.1 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 41/200 (20%), Positives = 82/200 (41%), Gaps = 17/200 (8%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLET 71
SI LF+ G ++ L IF + + + I++ V + + R F ++ QS
Sbjct: 3 SIAHLFVAGGF----VMYPLVIFLLFALMIGIERIVLYRKFTKDLRRFNKVLEKNQSWVM 58
Query: 72 VCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEK 131
+ L+ + L ++F A+ K ++ + ++ E +
Sbjct: 59 LPSILE-RDTLELGSLFARAIRSAKNYNS------------LENRLQDIVSYADERLKRG 105
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIP 191
LS+L + + L+G+LG VLGM+ F + G + G+ E+L++ GL V+I
Sbjct: 106 LSWLSMIVTMAPLLGLLGTVLGMIRAFAVVGGDIGAPTIITGGVSEALVATATGLTVAII 165
Query: 192 SSIAYNKFIEDSKKFAMQME 211
+ ++ +E
Sbjct: 166 ALGFHSYCAAKVNDSITTLE 185
>gi|146298256|ref|YP_001192847.1| MotA/TolQ/ExbB proton channel [Flavobacterium johnsoniae UW101]
gi|146152674|gb|ABQ03528.1| MotA/TolQ/ExbB proton channel [Flavobacterium johnsoniae UW101]
Length = 274
Score = 84.1 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 38/221 (17%), Positives = 85/221 (38%), Gaps = 12/221 (5%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITL--RRQFREFEQLFWSG 66
I+ + + G V L ++ I++ + +F
Sbjct: 53 HPINTLGMVYKGGFIVPA----LLGMFLMVVVFSIERFTVISKAAGKANLDKFMTSVQGS 108
Query: 67 ---QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAR 123
++E + +A SA+ +++ +G S + I + ++ A +
Sbjct: 109 IKEGNIEAAIAACDKQQGS-VANAIKSALIKYQDVKKEGFNSEEA-SEVIHKEIEEATSL 166
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISI 182
E+ + + ++ + ++ S G L G+LG V GM+ F ++A + + ++ GI E+LI+
Sbjct: 167 EMPMLEKNMTIISTLVSLGTLGGLLGTVSGMIKAFGALASAGTPDQAALATGISEALINT 226
Query: 183 LLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
G+ S+ + I+YN F ++ R
Sbjct: 227 ATGISTSVLAIISYNFFTAKIDDLTYSIDEAGTTIVNTYRR 267
>gi|121612706|ref|YP_999833.1| MotA/TolQ/ExbB proton channel family protein [Campylobacter jejuni
subsp. jejuni 81-176]
gi|167004804|ref|ZP_02270562.1| MotA/TolQ/ExbB proton channel family protein [Campylobacter jejuni
subsp. jejuni 81-176]
gi|87248976|gb|EAQ71938.1| MotA/TolQ/ExbB proton channel family protein [Campylobacter jejuni
subsp. jejuni 81-176]
Length = 184
Score = 84.1 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 33/200 (16%), Positives = 75/200 (37%), Gaps = 30/200 (15%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
IF F + ++ L ++ IL++S++ + T R + +E SLET+
Sbjct: 6 IFHFFNNSSIITYIVLLWLSLYFILAFSILFARLTYLATWRNKEKE---------SLETL 56
Query: 73 CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKL 132
L +I D +++ + L
Sbjct: 57 L--LGEKDLSRTDSILRK------------------CNDTTSNHLEIYKNLASRRASAGL 96
Query: 133 SFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPS 192
++L ++S +G+ G V+ ++ F + S +++ P I E+L++ G+ V+IP+
Sbjct: 97 TWLSIIASTSPFIGLFGTVISILETFGGLGTQNSLSII-APKISEALVATGCGILVAIPA 155
Query: 193 SIAYNKFIEDSKKFAMQMEG 212
+ + + ++
Sbjct: 156 YTFHLIIKRKAFELLSIIDS 175
>gi|283780652|ref|YP_003371407.1| MotA/TolQ/ExbB proton channel [Pirellula staleyi DSM 6068]
gi|283439105|gb|ADB17547.1| MotA/TolQ/ExbB proton channel [Pirellula staleyi DSM 6068]
Length = 313
Score = 84.1 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 36/216 (16%), Positives = 81/216 (37%), Gaps = 24/216 (11%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS----- 65
I++ L + G+ + + S+L ++ I++ + R
Sbjct: 70 INVLQLALDGGIF----MIPIAAMSLLGVTMAIERFIGLRKERILPDGLVTDLGQLSLQG 125
Query: 66 GQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
G + + + + A I S + + + + ++ + A ARE
Sbjct: 126 GFDPRKAYRICQQYPSSA-ANIVRSMLLKVGRPLSE-----------VEHTVSEASAREA 173
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQ---SIAGYYSNNVVSIPGIIESLISI 182
+ + + +L +S L+G+LG V GM+ F I + ++ GI +L++
Sbjct: 174 DRLYGNVRWLNLAASVTPLLGLLGTVQGMILAFHMTTVIDAGQNKSIALAEGIYTALVTT 233
Query: 183 LLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFS 218
GL V+IP+++ + F + Q++
Sbjct: 234 FAGLTVAIPAAMLSHYFEGRIQTLFHQVDELIFNLL 269
>gi|84683928|ref|ZP_01011830.1| MotA/TolQ/ExbB proton channel family protein [Maritimibacter
alkaliphilus HTCC2654]
gi|84667681|gb|EAQ14149.1| MotA/TolQ/ExbB proton channel family protein [Rhodobacterales
bacterium HTCC2654]
Length = 222
Score = 84.1 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 44/207 (21%), Positives = 83/207 (40%), Gaps = 17/207 (8%)
Query: 17 FMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITL---RRQFREFEQLFWSGQSLETVC 73
FM MG +I L ++ +I+ K + R + E W
Sbjct: 12 FMDMGGIAIWVIAALAA---VTAGLIVWKILRLGASGTWRPRPAERAVRLWQSGQRAEAR 68
Query: 74 KSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLS 133
+ + ++ + + + + +P ++ I R+ A EL + L
Sbjct: 69 RLVDGRRG-----VYATPVRAAIEGMGRDDMTPEMTREEISRV----AAGELFRQRKGLR 119
Query: 134 FLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGLCVSIP 191
L +++ LVG+LG VLGM+ FQ++ AG ++ GI E+L++ G+ V+IP
Sbjct: 120 ALELVATIAPLVGLLGTVLGMVAAFQALEAAGSRADPSDLAGGIWEALLTTAAGMAVAIP 179
Query: 192 SSIAYNKFIEDSKKFAMQMEGFANEFS 218
+S A F + + ++E
Sbjct: 180 ASAALTWFESIADRAQGRIEDMVTRLL 206
>gi|330974710|gb|EGH74776.1| biopolymer transport protein ExbB [Pseudomonas syringae pv. aceris
str. M302273PT]
Length = 126
Score = 84.1 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 28/121 (23%), Positives = 52/121 (42%), Gaps = 5/121 (4%)
Query: 21 GLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHH 80
+ V ++ L +FS+LSW++++ KS ++ + Q ++F + FWS L T + +
Sbjct: 7 SMIVPAVLWALILFSVLSWALLLIKSAQYVRQKSQNKQFTKAFWSAPDLLTAAEHSAQYP 66
Query: 81 NIGLAAIFMSAMSEWK----KSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLG 136
LA I S + I DR++R + I +E + + L
Sbjct: 67 G-ALARIANSGFEAMAVDESPRTTQQLAHTINRSDRLERNLRQQIQKERRALESGQAILA 125
Query: 137 S 137
S
Sbjct: 126 S 126
>gi|329961531|ref|ZP_08299612.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Bacteroides fluxus YIT 12057]
gi|328531743|gb|EGF58572.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Bacteroides fluxus YIT 12057]
Length = 268
Score = 84.1 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 30/199 (15%), Positives = 75/199 (37%), Gaps = 18/199 (9%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE----TVCKSLKNHHNIG 83
++L+ I ++ + I++ + ++F LE K + +
Sbjct: 74 MSLVAIALVIGLAFCIERIIYLSLAEINTKKFMAAIEGA--LEKGDVEAAKDIARNTRGP 131
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
+A+I+ + + D +++ + + + + S++ +
Sbjct: 132 IASIYYQGLMRIDQG-----------IDVVEKSVVSYGGVQAGYLEKGCSWITLFIAMAP 180
Query: 144 LVGILGAVLGMMGFFQSIAGYYS-NNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIED 202
+G LG V+GM+ F I + V G+ +LI+ + GL V++ + YN +
Sbjct: 181 SLGFLGTVIGMVQAFDKIQQVGDISPTVVAGGMKVALITTIFGLIVALILQVFYNYILSK 240
Query: 203 SKKFAMQMEGFANEFSAIL 221
+ +ME + ++
Sbjct: 241 IEALTSEMEDSSISLLDMV 259
>gi|319903086|ref|YP_004162814.1| MotA/TolQ/ExbB proton channel [Bacteroides helcogenes P 36-108]
gi|319418117|gb|ADV45228.1| MotA/TolQ/ExbB proton channel [Bacteroides helcogenes P 36-108]
Length = 271
Score = 84.1 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 30/199 (15%), Positives = 76/199 (38%), Gaps = 18/199 (9%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE----TVCKSLKNHHNIG 83
++L+ I ++ + I++ + ++F + LE K + +
Sbjct: 77 MSLVAIALVIGLAFCIERIIYLSLAEINTKKFMAAIEAA--LEKGDVEAAKDIARNTRGP 134
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
+A+I+ + + D +++ + + + + S++ +
Sbjct: 135 IASIYYQGLMRIDQG-----------IDVVEKSVVSYGGVQAGYLEKGCSWITLFIAMAP 183
Query: 144 LVGILGAVLGMMGFFQSIAGYYS-NNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIED 202
+G LG V+GM+ F I + V G+ +LI+ + GL V++ + YN +
Sbjct: 184 SLGFLGTVIGMVQAFDKIQQVGDISPTVVAGGMKVALITTIFGLIVALILQVFYNYILSK 243
Query: 203 SKKFAMQMEGFANEFSAIL 221
+ +ME + ++
Sbjct: 244 IEALTSEMEDSSISLLDMV 262
>gi|297170596|gb|ADI21622.1| biopolymer transport proteins [uncultured myxobacterium
HF0130_06F04]
Length = 216
Score = 84.1 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 33/209 (15%), Positives = 84/209 (40%), Gaps = 17/209 (8%)
Query: 28 ITLLFIFSILSWSVIIQKS-VNFITLRRQFREFEQLFWS---GQSLETVCKSLKNHHNIG 83
+ + + S+ ++I+++ F +F +++ K +
Sbjct: 15 MYPIALVSVFGIAIIVERFIFLFFKYNINANQFMAQIQKLVMANNIDRAIKLCNAAPSAA 74
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
L + + ++ K + I ++ A + IT++ L ++S+
Sbjct: 75 LPKVIKAGLTRANKGEIE-----------IANAIEEASLEVIPNITKRTPTLQAVSNLAT 123
Query: 144 LVGILGAVLGMMGFFQSIAGY--YSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIE 201
++G+LG ++G++ F ++A + I ++ + GL V+IP+ AY
Sbjct: 124 MLGLLGTIMGLIEAFDAVAKAPPDQKTTMLTAAIAIAMNTTGFGLMVAIPTIAAYVFLNN 183
Query: 202 DSKKFAMQMEGFANEFSAILSRQTEGNIS 230
SKK +++ ++ + +L + +G S
Sbjct: 184 TSKKIIDEIDQYSVKLQNLLVSRGKGAQS 212
>gi|218128737|ref|ZP_03457541.1| hypothetical protein BACEGG_00309 [Bacteroides eggerthii DSM 20697]
gi|317475478|ref|ZP_07934741.1| MotA/TolQ/ExbB proton channel family protein [Bacteroides eggerthii
1_2_48FAA]
gi|217989192|gb|EEC55507.1| hypothetical protein BACEGG_00309 [Bacteroides eggerthii DSM 20697]
gi|316908309|gb|EFV30000.1| MotA/TolQ/ExbB proton channel family protein [Bacteroides eggerthii
1_2_48FAA]
Length = 270
Score = 84.1 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 30/199 (15%), Positives = 76/199 (38%), Gaps = 18/199 (9%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE----TVCKSLKNHHNIG 83
++L+ I ++ + I++ + ++F + LE K + +
Sbjct: 76 MSLVAIALVIGLAFCIERIIYLSLAEINTKKFMAAIEAA--LEKGDVEAAKDIARNTRGP 133
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
+A+I+ + + D +++ + + + + S++ +
Sbjct: 134 IASIYYQGLMRIDQG-----------IDVVEKSVVSYGGVQAGYLEKGCSWITLFIAMAP 182
Query: 144 LVGILGAVLGMMGFFQSIAGYYS-NNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIED 202
+G LG V+GM+ F I + V G+ +LI+ + GL V++ + YN +
Sbjct: 183 SLGFLGTVIGMVQAFDKIQQVGDISPTVVAGGMKVALITTIFGLIVALILQVFYNYILSK 242
Query: 203 SKKFAMQMEGFANEFSAIL 221
+ +ME + ++
Sbjct: 243 IEALTSEMEDSSISLLDMV 261
>gi|119946046|ref|YP_943726.1| MotA/TolQ/ExbB proton channel [Psychromonas ingrahamii 37]
gi|119864650|gb|ABM04127.1| MotA/TolQ/ExbB proton channel [Psychromonas ingrahamii 37]
Length = 197
Score = 84.1 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 38/190 (20%), Positives = 79/190 (41%), Gaps = 18/190 (9%)
Query: 36 ILSWSVIIQKSVNFITLRRQFREFEQL---FWSGQSLETVCKSLKNHHNIG-LAAIFMSA 91
+L+ S+++ K F L+ + + +L +W L SLK + L M+
Sbjct: 1 MLALSIVLIKLWLFFPLQAENIKDVELALSYWQQGPLSKAQSSLKTRRPVSMLVQDAMAG 60
Query: 92 MSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAV 151
M E + + + + ++ + L L +++ L+G++G V
Sbjct: 61 MREQQSLTL------------LKQALSCQATDKINQFCMLLRPLEVIANLSPLLGLMGTV 108
Query: 152 LGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQ 209
LGM+ FQ + AG + + I ++L++ ++GL V+IP AY+ ++ +
Sbjct: 109 LGMISAFQKMEAAGNQVDPSILSGEIWQALLTTVVGLAVAIPVVAAYHLLDRKVERISNS 168
Query: 210 MEGFANEFSA 219
M +
Sbjct: 169 MNSYVTRVFT 178
>gi|322379156|ref|ZP_08053552.1| Putative biopolymer transport protein exbB-like 2 [Helicobacter
suis HS1]
gi|322381052|ref|ZP_08055080.1| biopolymer transport protein [Helicobacter suis HS5]
gi|321146522|gb|EFX41394.1| biopolymer transport protein [Helicobacter suis HS5]
gi|321148419|gb|EFX42923.1| Putative biopolymer transport protein exbB-like 2 [Helicobacter
suis HS1]
Length = 161
Score = 84.1 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 23/89 (25%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVS-IPGIIESLISILLGL 186
+ +L+ + ++ S VG+LG V G+M F + + + + + G+ +L S +GL
Sbjct: 58 LHRRLTLVATIGSNAPYVGLLGTVTGIMITFIELGNTSAVDTKAIMVGLALALKSTGMGL 117
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFAN 215
V+IPS + YN + S+ A + + + +
Sbjct: 118 IVAIPSVVIYNMLVRKSEIIATKWDIYHH 146
>gi|292493798|ref|YP_003529237.1| MotA/TolQ/ExbB proton channel [Nitrosococcus halophilus Nc4]
gi|291582393|gb|ADE16850.1| MotA/TolQ/ExbB proton channel [Nitrosococcus halophilus Nc4]
Length = 494
Score = 84.1 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 32/169 (18%), Positives = 67/169 (39%), Gaps = 14/169 (8%)
Query: 53 RRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDR 112
RR ++ L G+ + L +A + + + ++
Sbjct: 313 RRLTQQVNDLIQQGK--RQQAQELCQQTRGAIARVMAATIRNLERDRPH----------- 359
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-VVS 171
++ ++ AI E + S + +++ L+G+LG V GM+ F I + + + +
Sbjct: 360 LEDIISEAILHESAHLNRFGSMILIIAAISPLLGLLGTVTGMISTFDIITEFGTGDPKLL 419
Query: 172 IPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAI 220
GI +LI+ +GL V+IP+ +++ ME A + I
Sbjct: 420 SSGISIALITTEVGLAVAIPTLFVGTLLSSWAERIKDDMEKAALRVTNI 468
>gi|255011165|ref|ZP_05283291.1| hypothetical protein Bfra3_18634 [Bacteroides fragilis 3_1_12]
Length = 274
Score = 84.1 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 30/199 (15%), Positives = 75/199 (37%), Gaps = 18/199 (9%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQFREF----EQLFWSGQSLETVCKSLKNHHNIG 83
++L+ I ++ + I++ + ++F E G K + +
Sbjct: 80 MSLVAIALVIGLAFCIERIIYLSLAEINTKKFMSSIEAALEKGDV--EAAKDIARNTRGP 137
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
+A+I+ + + D +++ + + + + S++ +
Sbjct: 138 VASIYYQGLMRIDQG-----------IDVVEKSVVSYGGVQAGYLEKGCSWITLFIAMAP 186
Query: 144 LVGILGAVLGMMGFFQSIAGYYS-NNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIED 202
+G LG V+GM+ F I + V G+ +LI+ + GL V++ + YN +
Sbjct: 187 SLGFLGTVVGMVMAFDKIQQQGDISPTVVAGGMKVALITTIFGLVVALILQVFYNYILAK 246
Query: 203 SKKFAMQMEGFANEFSAIL 221
+ +ME + ++
Sbjct: 247 IEALTSEMEDSSISLLDMV 265
>gi|325982806|ref|YP_004295208.1| MotA/TolQ/ExbB proton channel [Nitrosomonas sp. AL212]
gi|325532325|gb|ADZ27046.1| MotA/TolQ/ExbB proton channel [Nitrosomonas sp. AL212]
Length = 209
Score = 84.1 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 37/207 (17%), Positives = 80/207 (38%), Gaps = 27/207 (13%)
Query: 7 AIMDISIFALFMQMGLAVK-CIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS 65
A + + I L G+ + ++ +L + W + + + +
Sbjct: 4 AELVLIIKQLLAAGGIVMPPLVLCILLL-----WYGLGYRFWVMKSPKSMGVR------- 51
Query: 66 GQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
+ K + H + +I A+ + + KG ++ + R +D A
Sbjct: 52 -----DLLKYYQQHDDKPAGSIVAQAIKQGVRLQKKGVKN-------LRRHLDAAFYEYE 99
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYY--SNNVVSIPGIIESLISIL 183
EI + + L+G+LG V+GM+ F S+A S + GI ++L +
Sbjct: 100 REIGRFSVLVRIVILISPLLGLLGTVIGMIETFDSLATMTLHSQSGGIAGGISQALFTTQ 159
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQM 210
+GL V+IP +A++ ++ + +
Sbjct: 160 MGLTVAIPGLLAHSMLNRKQQQIELDL 186
>gi|114320999|ref|YP_742682.1| MotA/TolQ/ExbB proton channel [Alkalilimnicola ehrlichii MLHE-1]
gi|114227393|gb|ABI57192.1| outer membrane transport energization protein ExbB [Alkalilimnicola
ehrlichii MLHE-1]
Length = 239
Score = 84.1 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 37/207 (17%), Positives = 81/207 (39%), Gaps = 20/207 (9%)
Query: 20 MGLAVKCIITLLFIFSILSWSVIIQKSVNFITLR----RQFREFEQLFWSGQSLETVCKS 75
G +K I L S+L+ ++++ K F +R E Q + G+ + +
Sbjct: 19 GGPVLKIIAAL----SVLTLAIVLLKVWQFRAVRLTRMGFVEEALQHWREGRD-QAALDT 73
Query: 76 LKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFL 135
+ N N + ++ +G + + + + +E + + L
Sbjct: 74 VSNTRNPAGPVLAVAM---------RGCLDRQVPTELVREEVTRIASASMERLRSMIRGL 124
Query: 136 GSMSSAGLLVGILGAVLGMMGFFQSIAGYYSN--NVVSIPGIIESLISILLGLCVSIPSS 193
+ + ++G+LG V+GM+ FQ + G SN + GI +L++ GL ++IP+
Sbjct: 125 EVIGALAPMLGLLGTVIGMIQAFQQLEGAGSNVDPALLSGGIWVALLTTAAGLALAIPAI 184
Query: 194 IAYNKFIEDSKKFAMQMEGFANEFSAI 220
+ +F ++E +
Sbjct: 185 ALASLLERYIDQFRHRLEDAVTRVFTL 211
>gi|296272614|ref|YP_003655245.1| MotA/TolQ/ExbB proton channel [Arcobacter nitrofigilis DSM 7299]
gi|296096788|gb|ADG92738.1| MotA/TolQ/ExbB proton channel [Arcobacter nitrofigilis DSM 7299]
Length = 169
Score = 84.1 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 25/98 (25%), Positives = 50/98 (51%), Gaps = 1/98 (1%)
Query: 115 RMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIP 173
++ I R + ++ L+ + ++S L+G+LG V+G++ F SI + +
Sbjct: 65 ESVENVINRRIRKLEFGLNTVKIIASIAPLLGLLGTVIGVLNSFDSITKSGLGDPSIFSN 124
Query: 174 GIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
GI +LI+ + GL V+IP I YN + ++++
Sbjct: 125 GISIALITTVAGLIVAIPHYIGYNYIVGILDDIELKIQ 162
>gi|254293574|ref|YP_003059597.1| MotA/TolQ/ExbB proton channel [Hirschia baltica ATCC 49814]
gi|254042105|gb|ACT58900.1| MotA/TolQ/ExbB proton channel [Hirschia baltica ATCC 49814]
Length = 455
Score = 84.1 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 39/212 (18%), Positives = 85/212 (40%), Gaps = 29/212 (13%)
Query: 17 FMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSL 76
Q GL ++ LL I + I K V + ++ ++
Sbjct: 269 IKQGGLPGYVVLGLLAI----GLVIGIYKLVTLTMIGAAVKKT-------------AQTK 311
Query: 77 KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLG 136
+ + LA IF + ++ S + ++ +D AI +E +I ++ +
Sbjct: 312 QAGSSNPLARIFQA----FEDSKQDDV-------EALELRLDEAILKETPKIDSFVNLIK 360
Query: 137 SMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISILLGLCVSIPSSIA 195
+++ ++G+LG V+GM+ F I + + ++ GI ++L++ + GL +IP +
Sbjct: 361 VLAAVSPMMGLLGTVVGMIRTFTQITLVGTGDPKTMADGISQALVTTVEGLVAAIPLILL 420
Query: 196 YNKFIEDSKKFAMQMEGFANEFSAILSRQTEG 227
+ ++ +E A A + Q G
Sbjct: 421 HAFVSAKARSVQQVLEEQAAGMVAERAEQKGG 452
>gi|330976698|gb|EGH76741.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. aptata str.
DSM 50252]
Length = 99
Score = 84.1 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 22/80 (27%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Query: 147 ILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIPSSIAYNKFIEDSKK 205
+ G V G++ +I+ S ++ + G I E+L++ +G+ V++P+ +AYN F K
Sbjct: 1 MFGTVFGIIHALSAISQAKSASIAVVAGPIGEALVATGVGIAVAVPAVLAYNFFGRRLKL 60
Query: 206 FAMQMEGFANEFSAILSRQT 225
+E FA +F + R
Sbjct: 61 VIADLEEFAVDFLNLSQRNA 80
>gi|152991166|ref|YP_001356888.1| biopolymer ExbB/TolQ family transporter [Nitratiruptor sp. SB155-2]
gi|151423027|dbj|BAF70531.1| biopolymer transport protein, ExbB/TolQ family [Nitratiruptor sp.
SB155-2]
Length = 144
Score = 84.1 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 22/85 (25%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYY-SNNVVSIPGIIESLISILLGL 186
IT LS + +++S+ +G+LG VLG++ F ++ N + G+ +L + +GL
Sbjct: 55 ITNNLSTIATIASSAPYIGLLGTVLGIILTFYTMGQSGIVNTKEIMIGLALALKATAMGL 114
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQME 211
V+IP+++ YN + + + +
Sbjct: 115 VVAIPATMFYNYLVRRVEVLLAKWD 139
>gi|330982827|gb|EGH80930.1| biopolymer transport protein ExbB [Pseudomonas syringae pv. aptata
str. DSM 50252]
Length = 119
Score = 84.1 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 28/120 (23%), Positives = 53/120 (44%), Gaps = 5/120 (4%)
Query: 22 LAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHN 81
+ V ++ L +FS+LSW++++ KS ++ + Q ++F ++FWS L T + +
Sbjct: 1 MIVPAVLWALILFSVLSWALLLIKSAQYVRQKSQNKQFTKVFWSAPDLLTAAEHSAQYPG 60
Query: 82 IGLAAIFMSAMSEWK----KSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGS 137
LA I S + I DR++R + I +E + + L S
Sbjct: 61 -ALARIANSGFEAMAVDESPRTTQQLAHTINRSDRLERNLRQQIQKERRALESGQAILAS 119
>gi|86149755|ref|ZP_01067985.1| MotA/TolQ/ExbB proton channel family protein [Campylobacter jejuni
subsp. jejuni CF93-6]
gi|85840023|gb|EAQ57282.1| MotA/TolQ/ExbB proton channel family protein [Campylobacter jejuni
subsp. jejuni CF93-6]
Length = 184
Score = 84.1 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 33/200 (16%), Positives = 75/200 (37%), Gaps = 30/200 (15%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
IF F + ++ L ++ IL++S++ + T R + +E SLET+
Sbjct: 6 IFHFFNSSSIITYIVLLWLSLYFILAFSILFARLTYLATWRNKEKE---------SLETL 56
Query: 73 CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKL 132
L +I D +++ + L
Sbjct: 57 L--LGEKDLSRTDSILRK------------------CNDTTSNHLEIYKNLASRRASAGL 96
Query: 133 SFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPS 192
++L ++S +G+ G V+ ++ F + G ++ + P I E+L++ G+ V+IP+
Sbjct: 97 TWLSIIASTSPFIGLFGTVISILETFGGL-GTQNSLSIVAPKISEALVATGCGILVAIPA 155
Query: 193 SIAYNKFIEDSKKFAMQMEG 212
+ + + ++
Sbjct: 156 YTFHLIIKRKAFELLSIIDS 175
>gi|330942708|gb|EGH45257.1| MotA/TolQ/ExbB proton channel family protein [Pseudomonas syringae
pv. pisi str. 1704B]
Length = 195
Score = 83.7 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 37/158 (23%), Positives = 67/158 (42%), Gaps = 13/158 (8%)
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
K + + L I + ++ + + + ++ A AR + E+
Sbjct: 27 DGEKLKQLRADSPLGEILAAGLANSRHGR-----------EIMKECIEEAAARVIHELER 75
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGLCV 188
LS LGS+++ L+G+LG VLGM+ F S +G +N V GI ++LI GL V
Sbjct: 76 YLSALGSIAAMAPLLGLLGTVLGMIDIFGSFNSSGATANAGVLAGGISKALICTASGLIV 135
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+IP+ + + + ME A ++ +
Sbjct: 136 AIPAIFFHRFLQSRVDELVVGMEQQAIRLVEVVQGDRD 173
>gi|53715026|ref|YP_101018.1| putative biopolymer transport protein [Bacteroides fragilis YCH46]
gi|60682988|ref|YP_213132.1| hypothetical protein BF3530 [Bacteroides fragilis NCTC 9343]
gi|253566123|ref|ZP_04843577.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
gi|265766874|ref|ZP_06094703.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
gi|52217891|dbj|BAD50484.1| putative biopolymer transport protein [Bacteroides fragilis YCH46]
gi|60494422|emb|CAH09218.1| putative membrane protein [Bacteroides fragilis NCTC 9343]
gi|251945227|gb|EES85665.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
gi|263253251|gb|EEZ24727.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
gi|301164453|emb|CBW24011.1| putative membrane protein [Bacteroides fragilis 638R]
Length = 273
Score = 83.7 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 30/199 (15%), Positives = 76/199 (38%), Gaps = 18/199 (9%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE----TVCKSLKNHHNIG 83
++L+ I ++ + I++ + ++F + LE K + +
Sbjct: 79 MSLVAIALVIGLAFCIERIIYLSLAEINTKKFMSSIEAA--LEKGDVEAAKDIARNTRGP 136
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
+A+I+ + + D +++ + + + + S++ +
Sbjct: 137 VASIYYQGLMRIDQG-----------IDVVEKSVVSYGGVQAGYLEKGCSWITLFIAMAP 185
Query: 144 LVGILGAVLGMMGFFQSIAGYYS-NNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIED 202
+G LG V+GM+ F I + V G+ +LI+ + GL V++ + YN +
Sbjct: 186 SLGFLGTVVGMVMAFDKIQQQGDISPTVVAGGMKVALITTIFGLVVALILQVFYNYILAK 245
Query: 203 SKKFAMQMEGFANEFSAIL 221
+ +ME + ++
Sbjct: 246 IEALTSEMEDSSISLLDMV 264
>gi|167764758|ref|ZP_02436879.1| hypothetical protein BACSTE_03148 [Bacteroides stercoris ATCC
43183]
gi|167697427|gb|EDS14006.1| hypothetical protein BACSTE_03148 [Bacteroides stercoris ATCC
43183]
Length = 269
Score = 83.7 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 30/199 (15%), Positives = 76/199 (38%), Gaps = 18/199 (9%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE----TVCKSLKNHHNIG 83
++L+ I ++ + I++ + ++F + LE K + +
Sbjct: 75 MSLVAIALVIGLAFCIERIIYLSLAEINTKKFIAAIEAA--LEKGDVEAAKDIARNTRGP 132
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
+A+I+ + + D +++ + + + + S++ +
Sbjct: 133 IASIYYQGLMRIDQG-----------IDVVEKSVVSYGGVQAGYLEKGCSWITLFIAMAP 181
Query: 144 LVGILGAVLGMMGFFQSIAGYYS-NNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIED 202
+G LG V+GM+ F I + V G+ +LI+ + GL V++ + YN +
Sbjct: 182 SLGFLGTVIGMVQAFDKIQQVGDISPTVVAGGMKVALITTIFGLIVALILQVFYNYILSK 241
Query: 203 SKKFAMQMEGFANEFSAIL 221
+ +ME + ++
Sbjct: 242 IEALTSEMEDSSISLLDMV 260
>gi|294055971|ref|YP_003549629.1| MotA/TolQ/ExbB proton channel [Coraliomargarita akajimensis DSM
45221]
gi|293615304|gb|ADE55459.1| MotA/TolQ/ExbB proton channel [Coraliomargarita akajimensis DSM
45221]
Length = 223
Score = 83.7 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 30/207 (14%), Positives = 79/207 (38%), Gaps = 17/207 (8%)
Query: 17 FMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSL 76
+Q G+ + L S+L + + I++++ + +F + + + ++L
Sbjct: 9 ILQGGIM----MYPLLFISLLGFVIFIERALFLHKGQIGTEDFLSGIKNLVRKKRLVEAL 64
Query: 77 K--NHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSF 134
+A I SA+ +RI + A EL + ++
Sbjct: 65 TLCEDTPGPMARIVKSAL-----------LHIGETPERILSAIQTAAVVELPALERRIGT 113
Query: 135 LGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSI 194
+ +++ L+G LG ++ + + +++ V + E+L++ GL +++ ++I
Sbjct: 114 IAAIARIAPLLGFLGTLIAAVKALYQLEAANADSGVFSQLLAEALVTSATGLAIAVMATI 173
Query: 195 AYNKFIEDSKKFAMQMEGFANEFSAIL 221
A++ + E + L
Sbjct: 174 AHHFLAGRVRALVHDFEWVGHTIHEFL 200
>gi|317011328|gb|ADU85075.1| biopolymer transport protein [Helicobacter pylori SouthAfrica7]
Length = 192
Score = 83.7 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 32/209 (15%), Positives = 79/209 (37%), Gaps = 26/209 (12%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLET 71
SI F + G ++ + ++ +++ V + KS+ R+ +++
Sbjct: 4 SIIYFFNKSGFITTLVLVWISLYLVMTLWVFLYKSIVLKIYLRR------------EMQS 51
Query: 72 VCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEK 131
+ L + +F K++ + S +Q +++ + T
Sbjct: 52 LSNILNGAQDAPEHFMFNK-----KRNNEAKKYSKELLQAWKHQVLKQS--------TTG 98
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-VVSIPGIIESLISILLGLCVSI 190
L L +SS +G+ G V+ ++ F ++ + V P I ++LI+ G+ +I
Sbjct: 99 LVVLSIISSTAPFIGLFGTVVEILEAFNNLGALGQASFGVIAPIISKALIATAAGILAAI 158
Query: 191 PSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
P+ Y ++ ++ + S+
Sbjct: 159 PAYSFYLILKRKVYDLSVYVQMQVDILSS 187
>gi|39933231|ref|NP_945507.1| MotA/TolQ/ExbB proton channel family protein [Rhodopseudomonas
palustris CGA009]
gi|39652856|emb|CAE25598.1| possible MotA/TolQ/ExbB proton channel family [Rhodopseudomonas
palustris CGA009]
Length = 212
Score = 83.7 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 54/208 (25%), Positives = 84/208 (40%), Gaps = 25/208 (12%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
++ A+F Q G VK ++ LL SILSW I++ V F+ L R
Sbjct: 6 LTPAAVFAQAGPVVKTVLVLLLAASILSWVWIVEAVVAFMRLSAALRR------------ 53
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRM---MDVAIARELEE 127
G A ++ +S + DR ++ M A + +
Sbjct: 54 ---------SRDGDEATILATVSAAGAAARDALPRGTSEADRRAKVVDTMTRAARDLILK 104
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
L L +SS VG+ G V G+M F IA ++ V PGI E+L + GL
Sbjct: 105 AEAGLPNLAIVSSVAPFVGLFGTVWGIMTSFAGIAEARDTSLAVVAPGIAEALAATAWGL 164
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFA 214
+IP+SI YN+ + A+ ++ F
Sbjct: 165 AAAIPASIGYNRIGALFNRTAIALDDFV 192
>gi|281423536|ref|ZP_06254449.1| MotA/TolQ/ExbB proton channel family protein [Prevotella oris
F0302]
gi|281402356|gb|EFB33187.1| MotA/TolQ/ExbB proton channel family protein [Prevotella oris
F0302]
Length = 282
Score = 83.7 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 30/201 (14%), Positives = 77/201 (38%), Gaps = 18/201 (8%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFI----TLRRQFREFEQLFWSGQSLETVCKSLKNHHNIG 83
++L+ + ++ + I++ + ++ + ++ G K L
Sbjct: 88 MSLVALALVIGLAFCIERIIYLSLSEINAKKFMTDLDERIMKGDI--EGAKKLCRDTRGP 145
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
+A+I + +S D I+R + + + + + S++ +
Sbjct: 146 VASICYQGLERVHES-----------IDNIERSVVSYGSVQAANLEKGCSWITLFIAMAP 194
Query: 144 LVGILGAVLGMMGFFQSIAGYYS-NNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIED 202
+G LG V+GM+ F I + + G+ +L++ + G+ V++ + YN +
Sbjct: 195 SLGFLGTVIGMVMAFDQIQTAGDISPTIVASGMKVALLTTIFGIIVALILQVFYNYILSK 254
Query: 203 SKKFAMQMEGFANEFSAILSR 223
+ QME A ++ +
Sbjct: 255 IEHITSQMEESAITLLDVVMK 275
>gi|42523823|ref|NP_969203.1| adventurous gliding motility protein R [Bdellovibrio bacteriovorus
HD100]
gi|39576030|emb|CAE80196.1| Adventurous gliding motility protein R [Bdellovibrio bacteriovorus
HD100]
Length = 244
Score = 83.7 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 37/202 (18%), Positives = 79/202 (39%), Gaps = 16/202 (7%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQFR-----EFEQLFWSGQSLETVCKSLKNHHNI 82
+ + + + S +++I+++ R+ + FE+ G+ + KS
Sbjct: 28 MWPILLIQVASIAIMIERAYALFVRRKITQFDFAMGFEESIRRGEMDAVISKSQAAMATN 87
Query: 83 GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAG 142
+A + + + G ++ I MD + +E + + FL +
Sbjct: 88 PVARAIAAGATAARNL---------GGKEEIQGKMDEVLIQENAALDHRTGFLTMFGNVA 138
Query: 143 LLVGILGAVLGMMGFFQSIAGYYSNNVVSI--PGIIESLISILLGLCVSIPSSIAYNKFI 200
L G+LG + GM+ F ++A S+ GI E++ + GL +IP+ +AY
Sbjct: 139 TLTGLLGTISGMISSFAAVAFANPAEKASLLSAGISEAMNATAYGLITAIPALVAYAILQ 198
Query: 201 EDSKKFAMQMEGFANEFSAILS 222
+ + A + + LS
Sbjct: 199 NRANRLAEDLNQAGLKVYNWLS 220
>gi|224418154|ref|ZP_03656160.1| biopolymer transport protein ExbB [Helicobacter canadensis MIT
98-5491]
gi|253827481|ref|ZP_04870366.1| biopolymer transport protein exbB [Helicobacter canadensis MIT
98-5491]
gi|313141689|ref|ZP_07803882.1| biopolymer transport protein exbb [Helicobacter canadensis MIT
98-5491]
gi|253510887|gb|EES89546.1| biopolymer transport protein exbB [Helicobacter canadensis MIT
98-5491]
gi|313130720|gb|EFR48337.1| biopolymer transport protein exbb [Helicobacter canadensis MIT
98-5491]
Length = 157
Score = 83.7 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 24/85 (28%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV-SIPGIIESLISILLGL 186
+++ L+ + ++ S VG+LG V G++ F I + + G+ +L + GL
Sbjct: 54 LSKNLTLIATIGSNAPYVGLLGTVFGIIMTFVQIGQLGMVDTANIMTGLALALQATAGGL 113
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQME 211
V+IPS I YN + S+ Q E
Sbjct: 114 LVAIPSIIFYNLLMRKSEVLVAQWE 138
>gi|313683196|ref|YP_004060934.1| outer membrane transport energization protein exbb [Sulfuricurvum
kujiense DSM 16994]
gi|313156056|gb|ADR34734.1| outer membrane transport energization protein ExbB [Sulfuricurvum
kujiense DSM 16994]
Length = 149
Score = 83.3 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 23/89 (25%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-VVSIPGIIESLISILLGL 186
+ +S + ++ S VG+LG VLG+M F S+ + + + G+ +L + +GL
Sbjct: 57 LGNNVSTIATIGSNAPYVGLLGTVLGIMITFYSLGDVGAVDPKKIMTGLALALKATAMGL 116
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFAN 215
V+IP+ + YN + ++ Q + A+
Sbjct: 117 VVAIPAIVFYNILLRKMERLLAQWDINAH 145
Score = 34.8 bits (79), Expect = 9.5, Method: Composition-based stats.
Identities = 23/115 (20%), Positives = 45/115 (39%), Gaps = 6/115 (5%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLR---RQFREFEQLFWS 65
M+ S L II +L + SI+S + I++ + + ++R + +E +
Sbjct: 1 MENSWLGLAHNA--VDYGIIGILVMMSIVSLWLFIERLMAYGSIRIGDYESKEELE-LDL 57
Query: 66 GQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVA 120
G ++ T+ N +GL + M + D GA P I + +
Sbjct: 58 GNNVSTIATIGSNAPYVGLLGTVLGIMITFYSLGDVGAVDPKKIMTGLALALKAT 112
>gi|84499344|ref|ZP_00997632.1| biopolymer transport exbB protein [Oceanicola batsensis HTCC2597]
gi|84392488|gb|EAQ04699.1| biopolymer transport exbB protein [Oceanicola batsensis HTCC2597]
Length = 216
Score = 83.3 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 36/184 (19%), Positives = 70/184 (38%), Gaps = 24/184 (13%)
Query: 27 IITLLFIFSILSWSVIIQKSVNFITL----RRQFREFEQLFWSGQSLETVCKSLKNHHNI 82
++ +L SIL +V++ K F R R+ + W L +
Sbjct: 19 VVLILGALSILVLTVVLYKLWQFAASGVGRHRALRDAIRA-WDAGERAGARGHLDRSTSY 77
Query: 83 GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAG 142
+ M+ D + +P ++ + L S++
Sbjct: 78 LRPVVAMA--------LDGQSDAP---------RLEAEAEARFARLESGFRLLDSVAQLA 120
Query: 143 LLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFI 200
L+G+ G VLGM+ FQ++ AG + V GI +L++ +GL V++P+++ + F
Sbjct: 121 PLLGLFGTVLGMISAFQAMQEAGSQVDPSVLAGGIWVALLTTAVGLAVAMPTALVLSWFE 180
Query: 201 EDSK 204
Sbjct: 181 ARMD 184
>gi|317503701|ref|ZP_07961718.1| MotA/TolQ/ExbB proton channel family protein [Prevotella salivae
DSM 15606]
gi|315665222|gb|EFV04872.1| MotA/TolQ/ExbB proton channel family protein [Prevotella salivae
DSM 15606]
Length = 282
Score = 83.3 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 32/200 (16%), Positives = 78/200 (39%), Gaps = 16/200 (8%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG---QSLETVCKSLKNHHNIGL 84
++L+ + ++ + I++ + ++F + + K+L + +
Sbjct: 88 MSLVALALVIGLAFCIERIIYLSLSEINAKKFMNDLDNSIMQGDI-EGAKALCRNTRGPV 146
Query: 85 AAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLL 144
A+I + +S D I+R + + + + + S++ +
Sbjct: 147 ASICFQGLERINES-----------IDNIERSVVSYGSVQSSNLEKGCSWITLFIAMAPS 195
Query: 145 VGILGAVLGMMGFFQSIAGYYS-NNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDS 203
+G LG V+GM+ F I + + G+ +L++ + G+ V++ I YN +
Sbjct: 196 LGFLGTVIGMVMAFDQIQTAGDISPTIVASGMKVALLTTIFGIIVALILQIFYNYILSKI 255
Query: 204 KKFAMQMEGFANEFSAILSR 223
+ QME A I+ +
Sbjct: 256 EHITSQMEESAISLLDIVMK 275
>gi|217973879|ref|YP_002358630.1| MotA/TolQ/ExbB proton channel [Shewanella baltica OS223]
gi|217499014|gb|ACK47207.1| MotA/TolQ/ExbB proton channel [Shewanella baltica OS223]
Length = 451
Score = 83.3 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 26/110 (23%), Positives = 56/110 (50%), Gaps = 1/110 (0%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-V 169
+ ++ +D AI +E + ++S + +++ ++G+LG V GM+ FQSI + + +
Sbjct: 334 ETLELKLDEAILKETPALEARISIIKVLAAIAPMMGLLGTVTGMIATFQSIQLFGTGDPK 393
Query: 170 VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
+ GI +LI+ + GL ++P + + + SK +E + A
Sbjct: 394 LMAGGISMALITTVQGLVAALPLMLMHAIVVARSKSIVQILEEQSAGIIA 443
>gi|154149487|ref|YP_001406270.1| ExbB\TolQ family transport protein [Campylobacter hominis ATCC
BAA-381]
gi|153805496|gb|ABS52503.1| ExbB\TolQ family transport protein [Campylobacter hominis ATCC
BAA-381]
Length = 192
Score = 83.3 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 35/217 (16%), Positives = 75/217 (34%), Gaps = 45/217 (20%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLF---WSGQSL 69
+ + ++T L I+ I + +++I + + +++ + + +L
Sbjct: 7 FLSYINRSSFITLFVLTWLSIYFIFTLTILISRYFGLNSWQKREQNALESLLMGRQASTL 66
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
TV K M+E + T
Sbjct: 67 NTVLKKFLTGRVTREKLAICQGMAE-------------------------------KNAT 95
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVS 189
L++L +SS +G+ G V+ ++ F + S+ V P I E+L++ G+ V+
Sbjct: 96 SGLTWLSIISSTSPFIGLFGTVISILDTFSKMGAGNSSIAVIAPAISEALVATGCGIFVA 155
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
IP+ A+ A E +I++R +
Sbjct: 156 IPAYTAHLLIKRK-----------AYEIMSIINRSAD 181
>gi|270340065|ref|ZP_06006927.2| MotA/TolQ/ExbB proton channel family protein [Prevotella bergensis
DSM 17361]
gi|270332840|gb|EFA43626.1| MotA/TolQ/ExbB proton channel family protein [Prevotella bergensis
DSM 17361]
Length = 290
Score = 83.3 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 32/186 (17%), Positives = 68/186 (36%), Gaps = 18/186 (9%)
Query: 43 IQKSVNFI----TLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKS 98
I++ + ++ + ++ SG KS +A+I + ++
Sbjct: 111 IERMIYLSLSEINAKKFMNDLDKKLASGDI--DGAKSQCRETRGPVASICYQGLERINET 168
Query: 99 CDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFF 158
D I+R + + + + + S++ +G LG V+GM+ F
Sbjct: 169 -----------IDNIERSVVSYGSVQSANLEKGCSWITLFIVMAPSLGFLGTVIGMVMAF 217
Query: 159 QSIAGYYS-NNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEF 217
I + + G+ +LI+ + G+ V++ I YN + + QME A
Sbjct: 218 DQIQTAGDISPTIVASGMKVALITTIFGIIVALILQIFYNYILSKIEHLTSQMEESAISL 277
Query: 218 SAILSR 223
+ R
Sbjct: 278 LDSVMR 283
>gi|304409744|ref|ZP_07391364.1| MotA/TolQ/ExbB proton channel [Shewanella baltica OS183]
gi|307304100|ref|ZP_07583853.1| MotA/TolQ/ExbB proton channel [Shewanella baltica BA175]
gi|304352262|gb|EFM16660.1| MotA/TolQ/ExbB proton channel [Shewanella baltica OS183]
gi|306912998|gb|EFN43421.1| MotA/TolQ/ExbB proton channel [Shewanella baltica BA175]
Length = 451
Score = 83.3 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 26/110 (23%), Positives = 56/110 (50%), Gaps = 1/110 (0%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-V 169
+ ++ +D AI +E + ++S + +++ ++G+LG V GM+ FQSI + + +
Sbjct: 334 ETLELKLDEAILKETPALEARISIIKVLAAIAPMMGLLGTVTGMIATFQSIQLFGTGDPK 393
Query: 170 VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
+ GI +LI+ + GL ++P + + + SK +E + A
Sbjct: 394 LMAGGISMALITTVQGLVAALPLMLMHAIVVARSKSIVQILEEQSAGIIA 443
>gi|317152292|ref|YP_004120340.1| MotA/TolQ/ExbB proton channel [Desulfovibrio aespoeensis Aspo-2]
gi|316942543|gb|ADU61594.1| MotA/TolQ/ExbB proton channel [Desulfovibrio aespoeensis Aspo-2]
Length = 206
Score = 83.3 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 43/198 (21%), Positives = 83/198 (41%), Gaps = 18/198 (9%)
Query: 17 FMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSL 76
+ Q G I+ L + S++ W++ I K + F++ RR+ R E+ + +
Sbjct: 13 YFQAGG---SIMLPLLVISLVMWTLAIVKGLRFLSERRRERTPERCL-------DLFRGE 62
Query: 77 KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLG 136
GLA +S++ + + D + M I + + +
Sbjct: 63 AGVCKAGLAQWQWDILSQYLEQRCDDPELNRDMLDAM--RMRQEI-----KAMRYIGTIL 115
Query: 137 SMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIA 195
+S+ L+G+LG V GM+ F I+ + N GI E+L++ GL V++P +
Sbjct: 116 LLSAVAPLLGLLGTVTGMITTFDVISELGTGNARALASGISEALVTTQSGLVVAVPGLVL 175
Query: 196 YNKFIEDSKKFAMQMEGF 213
+ ++K +ME F
Sbjct: 176 GGFLFQRAQKMKGRMELF 193
>gi|120599386|ref|YP_963960.1| MotA/TolQ/ExbB proton channel [Shewanella sp. W3-18-1]
gi|120559479|gb|ABM25406.1| MotA/TolQ/ExbB proton channel [Shewanella sp. W3-18-1]
Length = 451
Score = 83.3 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 26/110 (23%), Positives = 56/110 (50%), Gaps = 1/110 (0%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-V 169
+ ++ +D AI +E + ++S + +++ ++G+LG V GM+ FQSI + + +
Sbjct: 334 ETLELKLDEAILKETPALESRISIIKVLAAIAPMMGLLGTVTGMIATFQSIQLFGTGDPK 393
Query: 170 VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
+ GI +LI+ + GL ++P + + + SK +E + A
Sbjct: 394 LMAGGISMALITTVQGLVAALPLMLMHAIVVARSKSIVQVLEEQSAGIIA 443
>gi|153000153|ref|YP_001365834.1| MotA/TolQ/ExbB proton channel [Shewanella baltica OS185]
gi|151364771|gb|ABS07771.1| MotA/TolQ/ExbB proton channel [Shewanella baltica OS185]
Length = 451
Score = 83.3 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 26/110 (23%), Positives = 56/110 (50%), Gaps = 1/110 (0%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-V 169
+ ++ +D AI +E + ++S + +++ ++G+LG V GM+ FQSI + + +
Sbjct: 334 ETLELKLDEAILKETPALEARISIIKVLAAIAPMMGLLGTVTGMIATFQSIQLFGTGDPK 393
Query: 170 VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
+ GI +LI+ + GL ++P + + + SK +E + A
Sbjct: 394 LMAGGISMALITTVQGLVAALPLMLMHAVVVARSKSIVQILEEQSAGIIA 443
>gi|291286835|ref|YP_003503651.1| tonB-system energizer ExbB [Denitrovibrio acetiphilus DSM 12809]
gi|290883995|gb|ADD67695.1| tonB-system energizer ExbB [Denitrovibrio acetiphilus DSM 12809]
Length = 144
Score = 83.3 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 23/89 (25%), Positives = 44/89 (49%), Gaps = 1/89 (1%)
Query: 120 AIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIES 178
+ +T+++ + ++ S VG+LG VLG+M F +I + +V + + G+ S
Sbjct: 44 TVQAYEAVLTKRMYIVATVGSNAPYVGLLGTVLGIMHTFYAIGAKGTTDVNMIMTGLALS 103
Query: 179 LISILLGLCVSIPSSIAYNKFIEDSKKFA 207
L + GL +IP+ I YN + +
Sbjct: 104 LKATAAGLVTAIPAIILYNILNRRANELI 132
>gi|308048883|ref|YP_003912449.1| outer membrane transport energization protein ExbB [Ferrimonas
balearica DSM 9799]
gi|307631073|gb|ADN75375.1| outer membrane transport energization protein ExbB [Ferrimonas
balearica DSM 9799]
Length = 452
Score = 83.3 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 38/209 (18%), Positives = 87/209 (41%), Gaps = 29/209 (13%)
Query: 17 FMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSL 76
F Q G I LL + ++S I+ ++ +R Q + ++ +L + K+
Sbjct: 269 FHQGGTVGYIIAALLGVGVLISLWKILTLTMESAKIRAQVKNVDKP--GNNALGRILKTY 326
Query: 77 KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLG 136
+ + ++ + + ++ +D AI +E I ++ +
Sbjct: 327 QANKDVDV--------------------------ETLELKIDEAILKETPRIESGVNMIK 360
Query: 137 SMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-VVSIPGIIESLISILLGLCVSIPSSIA 195
M++ ++G+LG V GM+ FQ+I + + + + GI +L++ +LGL ++P +
Sbjct: 361 VMAAISPMLGLLGTVTGMIETFQNITLFGTGDPKIMAGGISMALVTTVLGLVAALPLLLM 420
Query: 196 YNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+ +K +E + A + Q
Sbjct: 421 HALVAGRAKSVVEVIEEQSAGIIATHAEQ 449
>gi|146292618|ref|YP_001183042.1| MotA/TolQ/ExbB proton channel [Shewanella putrefaciens CN-32]
gi|145564308|gb|ABP75243.1| MotA/TolQ/ExbB proton channel [Shewanella putrefaciens CN-32]
Length = 451
Score = 83.3 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 26/110 (23%), Positives = 56/110 (50%), Gaps = 1/110 (0%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-V 169
+ ++ +D AI +E + ++S + +++ ++G+LG V GM+ FQSI + + +
Sbjct: 334 ETLELKLDEAILKETPALESRISIIKVLAAIAPMMGLLGTVTGMIATFQSIQLFGTGDPK 393
Query: 170 VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
+ GI +LI+ + GL ++P + + + SK +E + A
Sbjct: 394 LMAGGISMALITTVQGLVAALPLMLMHAIVVARSKSIVQVLEEQSAGIIA 443
>gi|300311922|ref|YP_003776014.1| biopolymer transport protein [Herbaspirillum seropedicae SmR1]
gi|300074707|gb|ADJ64106.1| biopolymer transport protein [Herbaspirillum seropedicae SmR1]
Length = 241
Score = 83.3 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 34/155 (21%), Positives = 67/155 (43%), Gaps = 2/155 (1%)
Query: 59 FEQLFWSGQSLETVCKSLKNHHNIGLAAIF--MSAMSEWKKSCDKGARSPIGIQDRIDRM 116
F + SG+ ++ + ++ L I A + + +DR
Sbjct: 39 FARCLPSGKQIDQALMRADHRNDAALQDIAQRYRATVFGPTLHAAVESRALASGEAMDRY 98
Query: 117 MDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII 176
+D AI R + E+ L LG+ + G L+G+LG ++G+ F + S++ GI
Sbjct: 99 IDEAIVRTMPELDRALWLLGAAITLGPLIGLLGTIIGITESFNVLGTAGSSSGAVTNGIG 158
Query: 177 ESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
SL++ GL V+I A + F + + ++++
Sbjct: 159 HSLLATGCGLLVAIAGVAANSYFSKRVRLALLELD 193
>gi|160874780|ref|YP_001554096.1| MotA/TolQ/ExbB proton channel [Shewanella baltica OS195]
gi|160860302|gb|ABX48836.1| MotA/TolQ/ExbB proton channel [Shewanella baltica OS195]
gi|315267018|gb|ADT93871.1| MotA/TolQ/ExbB proton channel [Shewanella baltica OS678]
Length = 451
Score = 83.3 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 26/110 (23%), Positives = 56/110 (50%), Gaps = 1/110 (0%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-V 169
+ ++ +D AI +E + ++S + +++ ++G+LG V GM+ FQSI + + +
Sbjct: 334 ETLELKLDEAILKETPALEARISIIKVLAAIAPMMGLLGTVTGMIATFQSIQLFGTGDPK 393
Query: 170 VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
+ GI +LI+ + GL ++P + + + SK +E + A
Sbjct: 394 LMAGGISMALITTVQGLVAALPLMLMHAVVVARSKSIVQILEEQSAGIIA 443
>gi|298374697|ref|ZP_06984655.1| MotA/TolQ/ExbB proton channel family protein [Bacteroides sp.
3_1_19]
gi|298269065|gb|EFI10720.1| MotA/TolQ/ExbB proton channel family protein [Bacteroides sp.
3_1_19]
Length = 247
Score = 83.3 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 28/198 (14%), Positives = 70/198 (35%), Gaps = 20/198 (10%)
Query: 33 IFSILSWSVII------QKSVNFITLRRQFREFEQLFWSGQSLE--TVCKSLKNHHNIGL 84
S+++ ++I ++ + + + K++ +
Sbjct: 52 FMSLVAIALIFGLAFCLERIIYLNLAETNSSKLLKGIEDALDKGDVEGAKAIARDTRGPI 111
Query: 85 AAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLL 144
A+I + + D +++ + + + + +S++ +
Sbjct: 112 ASIAYQGLMRIDQG-----------IDVVEKSIVSYGGVQGGLLEKNMSWITLFIAMAPS 160
Query: 145 VGILGAVLGMMGFFQSIAGYYS-NNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDS 203
+G LG V+GM+ F I N V G+ +LI+ + GL V++ + YN +
Sbjct: 161 LGFLGTVVGMIMAFDKIEQVGDINPTVVAGGMKVALITTVGGLIVALILQVFYNYLLSKL 220
Query: 204 KKFAMQMEGFANEFSAIL 221
+ QME + ++
Sbjct: 221 EAILNQMEDASISLLDLV 238
>gi|223939662|ref|ZP_03631536.1| MotA/TolQ/ExbB proton channel [bacterium Ellin514]
gi|223891713|gb|EEF58200.1| MotA/TolQ/ExbB proton channel [bacterium Ellin514]
Length = 208
Score = 83.3 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 44/198 (22%), Positives = 83/198 (41%), Gaps = 11/198 (5%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAI 87
+ ++ S ++ +V +++ ++ + EF L V LK + + +I
Sbjct: 13 LWVILFASAVAIAVFVERFLHCHRAQINSAEF---------LNGVRTVLKRENVVEAISI 63
Query: 88 FMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGI 147
+ + + ++R+ ++ E+ + EKL+ L ++ L+G+
Sbjct: 64 CDATPGPVARLVKTAILNRDYGRERVRESLEETGLAEVPRLEEKLNLLATLGQLAPLLGL 123
Query: 148 LGAVLGMMGFFQSIAGYY--SNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKK 205
LG VLG + FQSI +N GI ++LI + GL VSI AYN +
Sbjct: 124 LGTVLGFIKVFQSINSKGVFANVQELSSGIWQALICMAAGLAVSIVCHAAYNYLVSRVNA 183
Query: 206 FAMQMEGFANEFSAILSR 223
+ ME A E I++
Sbjct: 184 IVLDMEKAATEIVNIVTE 201
>gi|86160725|ref|YP_467510.1| MotA/TolQ/ExbB proton channel [Anaeromyxobacter dehalogenans 2CP-C]
gi|197124827|ref|YP_002136778.1| MotA/TolQ/ExbB proton channel [Anaeromyxobacter sp. K]
gi|220919544|ref|YP_002494848.1| MotA/TolQ/ExbB proton channel [Anaeromyxobacter dehalogenans 2CP-1]
gi|85777236|gb|ABC84073.1| MotA/TolQ/ExbB proton channel [Anaeromyxobacter dehalogenans 2CP-C]
gi|196174676|gb|ACG75649.1| MotA/TolQ/ExbB proton channel [Anaeromyxobacter sp. K]
gi|219957398|gb|ACL67782.1| MotA/TolQ/ExbB proton channel [Anaeromyxobacter dehalogenans 2CP-1]
Length = 224
Score = 83.3 bits (205), Expect = 3e-14, Method: Composition-based stats.
Identities = 29/162 (17%), Positives = 65/162 (40%), Gaps = 13/162 (8%)
Query: 67 QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
L+ + L ++ + + P G D + MD A RE
Sbjct: 62 GDLDRAISFCASQKKTPLVSVIKAGL----------INVPKGEAD-VQAAMDEATLRESP 110
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVS--IPGIIESLISILL 184
+I ++ +L + + L+G+LG ++G++G F ++A + + I E++
Sbjct: 111 KIEKRTGYLAMLGNVATLLGLLGTIVGLIGAFGAVANASPADKATILANSISEAMNCTAF 170
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
GL +IP+ +AY+ S++ + + ++ +
Sbjct: 171 GLLTAIPALVAYSVLQGKSQQMLDDINETSVSVLNLIVANRD 212
>gi|296272179|ref|YP_003654810.1| MotA/TolQ/ExbB proton channel [Arcobacter nitrofigilis DSM 7299]
gi|296096354|gb|ADG92304.1| MotA/TolQ/ExbB proton channel [Arcobacter nitrofigilis DSM 7299]
Length = 158
Score = 83.3 bits (205), Expect = 3e-14, Method: Composition-based stats.
Identities = 27/92 (29%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 119 VAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIE 177
I E++++ L+++ +++S L+G+LG V G+ F++I + + GI
Sbjct: 59 AQIEYEVKKLETGLTYIKNIASIAPLLGLLGTVYGVFKSFEAITKNGLGDPSIFSNGISI 118
Query: 178 SLISILLGLCVSIPSSIAYNKFIEDSKKFAMQ 209
+LI+ + GL V+IP IAYN FI ++
Sbjct: 119 ALITTIAGLIVAIPHHIAYNHFISQIDAIELK 150
>gi|332885907|gb|EGK06151.1| hypothetical protein HMPREF9456_00025 [Dysgonomonas mossii DSM
22836]
Length = 235
Score = 83.3 bits (205), Expect = 3e-14, Method: Composition-based stats.
Identities = 40/200 (20%), Positives = 81/200 (40%), Gaps = 24/200 (12%)
Query: 38 SWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE-----TVCKSLK--NHHNIGLAAIFMS 90
S VII K + L ++ W + +E + K+LK A + +
Sbjct: 50 SIYVIINKWLVISRLGKK-----DSIWLSRVIELVNEGKIDKALKFCIERPYASAKVIAA 104
Query: 91 AMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGA 150
+ E++ S + I+ M+V +++ + ++++LG +S ++G LG
Sbjct: 105 GLKEFELSEKE-----------IEEAMEVEARQQVNILENQMNWLGITASIAPMLGFLGT 153
Query: 151 VLGMMGFFQSIAGYYSNNVVSIP-GIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQ 209
+ G++ F IA + +I G+ + +I GL V I + Y K +
Sbjct: 154 IFGVIKIFYDIARTNDLAIDTISTGLYQKMICSAAGLLVGIVAYSGYYILNGRIDKVVVN 213
Query: 210 MEGFANEFSAILSRQTEGNI 229
++ +NE + +G I
Sbjct: 214 IDKDSNEVLKAIRAYKKGTI 233
>gi|126173873|ref|YP_001050022.1| MotA/TolQ/ExbB proton channel [Shewanella baltica OS155]
gi|125997078|gb|ABN61153.1| MotA/TolQ/ExbB proton channel [Shewanella baltica OS155]
Length = 451
Score = 83.3 bits (205), Expect = 3e-14, Method: Composition-based stats.
Identities = 26/110 (23%), Positives = 56/110 (50%), Gaps = 1/110 (0%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-V 169
+ ++ +D AI +E + ++S + +++ ++G+LG V GM+ FQSI + + +
Sbjct: 334 ETLELKLDEAILKETPALEARISIIKVLAAIAPMMGLLGTVTGMIATFQSIQLFGTGDPK 393
Query: 170 VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
+ GI +LI+ + GL ++P + + + SK +E + A
Sbjct: 394 LMAGGISMALITTVQGLVAALPLMLMHAVVVARSKSIVQILEEQSAGIIA 443
>gi|326793765|ref|YP_004311585.1| MotA/TolQ/ExbB proton channel [Marinomonas mediterranea MMB-1]
gi|326544529|gb|ADZ89749.1| MotA/TolQ/ExbB proton channel [Marinomonas mediterranea MMB-1]
Length = 227
Score = 83.3 bits (205), Expect = 3e-14, Method: Composition-based stats.
Identities = 38/191 (19%), Positives = 85/191 (44%), Gaps = 15/191 (7%)
Query: 27 IITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLF---WSGQSLETVCKSLKNHHNIG 83
++ +L FS+++ ++++ K + F L+ + + W +L+ K+L+ I
Sbjct: 19 VVWILLGFSVVALTIVLAKVIQFAGLKAESTKTADKAIDAWRKDNLDGAIKNLRPQRPID 78
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
F ++ + +++ +R+ ++L + L L ++S
Sbjct: 79 GVVSFAI------RALQNASMDLATVREETERL----ALKQLHTLRSFLRPLEIIASLSP 128
Query: 144 LVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIE 201
L+G+LG VLGM+ FQ + AG + V GI ++L++ +G+ V++P +
Sbjct: 129 LLGLLGTVLGMIAAFQKMEGAGSQVDPSVLSGGIWQALLTTAVGIAVAVPVMTLHAWLER 188
Query: 202 DSKKFAMQMEG 212
++ A M
Sbjct: 189 KVERVAHNMND 199
>gi|315931503|gb|EFV10470.1| motA/TolQ/ExbB proton channel family protein [Campylobacter jejuni
subsp. jejuni 327]
Length = 184
Score = 83.3 bits (205), Expect = 3e-14, Method: Composition-based stats.
Identities = 33/200 (16%), Positives = 75/200 (37%), Gaps = 30/200 (15%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
IF F + ++ L ++ IL++S++ + T R + +E SLET+
Sbjct: 6 IFHFFNSSSIITYIVLLWLSLYFILAFSILFARLTYLATWRNKEKE---------SLETL 56
Query: 73 CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKL 132
L +I D +++ + L
Sbjct: 57 L--LGEKDLSRTDSILRK------------------CNDTTSNHLEIYKNLASRRASTGL 96
Query: 133 SFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPS 192
++L ++S +G+ G V+ ++ F + S +++ P I E+L++ G+ V+IP+
Sbjct: 97 TWLSIIASTSPFIGLFGTVISILETFGGLGTQNSLSII-APKISEALVATGCGILVAIPA 155
Query: 193 SIAYNKFIEDSKKFAMQMEG 212
+ + + ++
Sbjct: 156 YTFHLIIKRKAFELLSIIDS 175
>gi|192360816|ref|YP_001981090.1| TolR [Cellvibrio japonicus Ueda107]
gi|190686981|gb|ACE84659.1| TolR [Cellvibrio japonicus Ueda107]
Length = 458
Score = 82.9 bits (204), Expect = 3e-14, Method: Composition-based stats.
Identities = 30/110 (27%), Positives = 61/110 (55%), Gaps = 1/110 (0%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-V 169
D + + +D I ++L E+ + LS + M++ L+G+LG V GM+G FQ+I + + +
Sbjct: 338 DVLGKKLDEVIFKDLAELRKGLSTIKVMAAIAPLMGLLGTVTGMIGTFQAITLFGTGDPK 397
Query: 170 VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
+ GI ++L++ + GL V+IP ++ N +++ + A+ A
Sbjct: 398 LMAGGISQALVTTVQGLVVAIPLLLSSNMLGSRAQQLGKVIGEQASGMIA 447
>gi|307637799|gb|ADN80249.1| proton channel family protein [Helicobacter pylori 908]
gi|325996397|gb|ADZ51802.1| biopolymer transport protein [Helicobacter pylori 2018]
Length = 192
Score = 82.9 bits (204), Expect = 3e-14, Method: Composition-based stats.
Identities = 34/210 (16%), Positives = 81/210 (38%), Gaps = 28/210 (13%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFI-TLRRQFREFEQLFWSGQSLE 70
SI F + G ++ + ++ +++ V + KS+ LRR+ +
Sbjct: 4 SIVYFFNKSGFVTTLVLVWISLYLVMTLWVFLYKSIVLKIELRREM-------------Q 50
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
++ L + +F K++ + S +Q +++ + T
Sbjct: 51 SLSNILNGAQDAPEHFMFNK-----KRNDETKRYSNELLQAWKHQVLKQS--------TT 97
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-VVSIPGIIESLISILLGLCVS 189
L L +SS +G+ G V+ ++ F ++ + V +P I ++LI+ G+ +
Sbjct: 98 GLVVLSIISSTAPFIGLFGTVVEILEAFNNLGALGQASFGVIVPIISKALIATAAGILAA 157
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
IP+ Y ++ ++ + S+
Sbjct: 158 IPAYSFYLILKRKVYDLSVYVQMQVDILSS 187
>gi|319425922|gb|ADV53996.1| TonB mediated energy transduction system, permease component, TtpC
[Shewanella putrefaciens 200]
Length = 451
Score = 82.9 bits (204), Expect = 3e-14, Method: Composition-based stats.
Identities = 26/110 (23%), Positives = 56/110 (50%), Gaps = 1/110 (0%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-V 169
+ ++ +D AI +E + ++S + +++ ++G+LG V GM+ FQSI + + +
Sbjct: 334 ETLELKLDEAILKETPALESRISIIKVLAAIAPMMGLLGTVTGMIATFQSIQLFGTGDPK 393
Query: 170 VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
+ GI +LI+ + GL ++P + + + SK +E + A
Sbjct: 394 LMAGGISMALITTVQGLVAALPLMLMHAIVVARSKSIVQVLEEQSAGIIA 443
>gi|284925402|gb|ADC27754.1| MotA/TolQ/ExbB proton channel family protein [Campylobacter jejuni
subsp. jejuni IA3902]
Length = 184
Score = 82.9 bits (204), Expect = 3e-14, Method: Composition-based stats.
Identities = 33/200 (16%), Positives = 75/200 (37%), Gaps = 30/200 (15%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
IF F + ++ L ++ IL++S++ + T R + +E SLET+
Sbjct: 6 IFHFFNSSSIITYIVLLWLSLYFILAFSILFARLTYLATWRNKEKE---------SLETL 56
Query: 73 CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKL 132
L +I D +++ + L
Sbjct: 57 L--LGEKDLSRTDSILRK------------------CNDTTSNHLEIYKNLASRRASAGL 96
Query: 133 SFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPS 192
++L ++S +G+ G V+ ++ F + S +++ P I E+L++ G+ V+IP+
Sbjct: 97 TWLSIIASTSPFIGLFGTVISILETFGGLGTQNSLSLI-APKISEALVATGCGILVAIPA 155
Query: 193 SIAYNKFIEDSKKFAMQMEG 212
+ + + ++
Sbjct: 156 YTFHLIIKRKAFELLSIIDS 175
>gi|237751951|ref|ZP_04582431.1| biopolymer transporter ExbB [Helicobacter winghamensis ATCC
BAA-430]
gi|229376518|gb|EEO26609.1| biopolymer transporter ExbB [Helicobacter winghamensis ATCC
BAA-430]
Length = 148
Score = 82.9 bits (204), Expect = 3e-14, Method: Composition-based stats.
Identities = 23/89 (25%), Positives = 43/89 (48%), Gaps = 1/89 (1%)
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVS-IPGIIESLISILLGL 186
+++ L+ + ++ S VG+LG V G++ F + + S + G+ +L + GL
Sbjct: 51 LSKNLTLIATIGSNAPYVGLLGTVFGIILTFVQLGQSGMVDTASIMTGLALALQATAGGL 110
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFAN 215
V+IPS + YN + S+ Q E
Sbjct: 111 LVAIPSIVFYNLLMRKSEVLVAQWEVLGE 139
>gi|114569420|ref|YP_756100.1| MotA/TolQ/ExbB proton channel [Maricaulis maris MCS10]
gi|114339882|gb|ABI65162.1| outer membrane transport energization protein ExbB [Maricaulis
maris MCS10]
Length = 462
Score = 82.9 bits (204), Expect = 3e-14, Method: Composition-based stats.
Identities = 28/110 (25%), Positives = 54/110 (49%), Gaps = 1/110 (0%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV- 169
+ ++ +D AI +E ++ L+FL + L+G+LG V GM+ F I + + +
Sbjct: 344 ETMELKLDEAILQETPKLEFGLNFLKLAAGIAPLLGLLGTVTGMIKTFTQITLFGTGDPR 403
Query: 170 VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
+ GI E+L++ +LGL +IP ++ ++ +E A A
Sbjct: 404 IMAGGISEALMTTVLGLIAAIPLLFIHSFAQSFARGVQQVLEEQAAGMIA 453
>gi|329957779|ref|ZP_08298254.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Bacteroides clarus YIT 12056]
gi|328522656|gb|EGF49765.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Bacteroides clarus YIT 12056]
Length = 270
Score = 82.9 bits (204), Expect = 3e-14, Method: Composition-based stats.
Identities = 30/199 (15%), Positives = 75/199 (37%), Gaps = 18/199 (9%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE----TVCKSLKNHHNIG 83
++L+ I ++ + I++ + ++F + LE K +
Sbjct: 76 MSLVAIALVIGLAFCIERIIYLSLAEINTKKFMAAIEAA--LEKGDVEAAKDIARSTRGP 133
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
+A+I+ + + D +++ + + + + S++ +
Sbjct: 134 IASIYYQGLMRIDQG-----------IDVVEKSVVSYGGVQAGYLEKGCSWITLFIAMAP 182
Query: 144 LVGILGAVLGMMGFFQSIAGYYS-NNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIED 202
+G LG V+GM+ F I + V G+ +LI+ + GL V++ + YN +
Sbjct: 183 SLGFLGTVIGMVQAFDKIQQVGDISPTVVAGGMKVALITTIFGLIVALILQVFYNYILSK 242
Query: 203 SKKFAMQMEGFANEFSAIL 221
+ +ME + ++
Sbjct: 243 IEALTSEMEDSSISLLDMV 261
>gi|53802337|ref|YP_112966.1| MotA/TolQ/ExbB proton channel family protein [Methylococcus
capsulatus str. Bath]
gi|53756098|gb|AAU90389.1| MotA/TolQ/ExbB proton channel family protein [Methylococcus
capsulatus str. Bath]
Length = 403
Score = 82.9 bits (204), Expect = 3e-14, Method: Composition-based stats.
Identities = 32/156 (20%), Positives = 70/156 (44%), Gaps = 12/156 (7%)
Query: 58 EFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMM 117
F L + + + SL+ + L + + + ++ +D + +
Sbjct: 230 RFADLARTSRRIRRQLGSLEARSDNPLGRVLL-----------RLEQAQTEDEDALYLTV 278
Query: 118 DVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGII 176
D A+A E + L L +++ ++G+LG V GM+ FQ+IA + S + + GI
Sbjct: 279 DEALAGERMRLERALGLLKLVAAIAPMLGLLGTVTGMIRTFQAIALHGSGDPRLMSGGIS 338
Query: 177 ESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEG 212
E+L++ + GL +IP + ++ + ++ +E
Sbjct: 339 EALVTTVEGLVTAIPILLLHSVLVGKAQALGTLLEA 374
>gi|330969759|gb|EGH69825.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. aceris str.
M302273PT]
Length = 122
Score = 82.9 bits (204), Expect = 3e-14, Method: Composition-based stats.
Identities = 25/117 (21%), Positives = 48/117 (41%), Gaps = 3/117 (2%)
Query: 22 LAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHN 81
L + + LL IFS+++W++++ K+ L RQ R + FW+ + L+ +
Sbjct: 8 LITQSSMALLVIFSLVTWALLLGKTFQHWRLTRQNRRYATQFWAARDLKNALHL--PNSE 65
Query: 82 IGLAAIFMSAMSEWKKSCDK-GARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGS 137
LA + + D QD ++R + I +E + + L S
Sbjct: 66 GSLARLTDAGAQALAAPHDSPDLGDSWNRQDLLERSLRQQIHKERRRLESGMILLAS 122
>gi|118475495|ref|YP_892777.1| TonB-system energizer ExbB [Campylobacter fetus subsp. fetus 82-40]
gi|261886317|ref|ZP_06010356.1| TonB-system energizer ExbB [Campylobacter fetus subsp. venerealis
str. Azul-94]
gi|118414721|gb|ABK83141.1| TonB-system energizer ExbB [Campylobacter fetus subsp. fetus 82-40]
Length = 145
Score = 82.9 bits (204), Expect = 3e-14, Method: Composition-based stats.
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILL 184
+ I+E L+ L + S VG+LG V+G+M F ++ + +V + G+ +L + L
Sbjct: 50 DSISENLTTLYIIYSNAPYVGLLGTVIGIMITFYDMSLAGNIDVKSVVSGLSLALKATAL 109
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQM 210
GL V+IPS IAYN + +
Sbjct: 110 GLFVAIPSLIAYNALLRKVNLVINRY 135
>gi|212637632|ref|YP_002314157.1| MotA/TolQ/ExbB proton channel [Shewanella piezotolerans WP3]
gi|212559116|gb|ACJ31570.1| MotA/TolQ/ExbB proton channel [Shewanella piezotolerans WP3]
Length = 412
Score = 82.9 bits (204), Expect = 3e-14, Method: Composition-based stats.
Identities = 25/129 (19%), Positives = 59/129 (45%), Gaps = 2/129 (1%)
Query: 96 KKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMM 155
++ + + + + + + ++ K+ L + ++ L+G+LG V GM+
Sbjct: 279 QQLFELANSHRHWPHEALADKLHHQLLQWKSQLDSKMVMLAATAAVAPLLGLLGTVSGMI 338
Query: 156 GFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFA 214
F+ + + + + + GI E+L++ LGL V++P+ + + + + Q+E
Sbjct: 339 HTFEMMNLFGNQDQNMLAGGISEALVTTELGLVVAVPTLLLHAYINRRHQAYLAQLEA-D 397
Query: 215 NEFSAILSR 223
A LSR
Sbjct: 398 TVLLAELSR 406
>gi|317014516|gb|ADU81952.1| biopolymer transport protein [Helicobacter pylori Gambia94/24]
Length = 192
Score = 82.9 bits (204), Expect = 3e-14, Method: Composition-based stats.
Identities = 34/210 (16%), Positives = 80/210 (38%), Gaps = 28/210 (13%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFI-TLRRQFREFEQLFWSGQSLE 70
SI F + G ++ + ++ +++ V + KS+ LRR+ +
Sbjct: 4 SIVYFFNKSGFVTTLVLVWISLYLVMTLWVFLYKSIVLKIELRREM-------------Q 50
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
++ L + +F K++ + S +Q +++ + T
Sbjct: 51 SLSNILNGAQDAPEHFMFNK-----KRNDETKRYSNELLQAWKHQVLKQS--------TT 97
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-VVSIPGIIESLISILLGLCVS 189
L L +SS +G+ G V+ ++ F ++ + V P I ++LI+ G+ +
Sbjct: 98 GLVVLSIISSTAPFIGLFGTVVEILEAFNNLGALGQASFGVIAPIISKALIATAAGILAA 157
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
IP+ Y ++ ++ + S+
Sbjct: 158 IPAYSFYLILKRKVYDLSVYVQMQVDILSS 187
>gi|332673928|gb|AEE70745.1| biopolymer transporter [Helicobacter pylori 83]
Length = 197
Score = 82.9 bits (204), Expect = 3e-14, Method: Composition-based stats.
Identities = 34/217 (15%), Positives = 85/217 (39%), Gaps = 29/217 (13%)
Query: 5 GLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFI-TLRRQFREFEQLF 63
G+ ++D SI F + G ++ + ++ +++ + + KS+ L+R+
Sbjct: 6 GIIMLD-SIVYFFNKSGFVTTLVLIWISLYLVMTLWIFLYKSIVLKIELKREM------- 57
Query: 64 WSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAR 123
+++ L + +F K++ + S +Q +++ +
Sbjct: 58 ------QSLSNILNGVQDAPEHFMFNK-----KRNDETKRYSNELLQAWKHQVLKQS--- 103
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-VVSIPGIIESLISI 182
T L L +SS +G+ G V+ ++ F ++ + V P I ++LI+
Sbjct: 104 -----TTGLVVLSIISSTAPFIGLFGTVVEILEAFNNLGALGQASFGVIAPIISKALIAT 158
Query: 183 LLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
G+ +IP+ Y ++ ++ + S+
Sbjct: 159 AAGILAAIPAYSFYLILKRKVYDLSVYVQMQVDILSS 195
>gi|91793776|ref|YP_563427.1| MotA/TolQ/ExbB proton channel [Shewanella denitrificans OS217]
gi|91715778|gb|ABE55704.1| MotA/TolQ/ExbB proton channel [Shewanella denitrificans OS217]
Length = 450
Score = 82.9 bits (204), Expect = 3e-14, Method: Composition-based stats.
Identities = 25/110 (22%), Positives = 56/110 (50%), Gaps = 1/110 (0%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-V 169
+ ++ +D AI +E + ++S + +++ ++G+LG V GM+ FQSI + + +
Sbjct: 333 ETLELKLDEAILKETPALEARISIIKVLAAIAPMMGLLGTVTGMIATFQSIQLFGTGDPK 392
Query: 170 VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
+ GI +L++ + GL ++P + + + SK +E + A
Sbjct: 393 LMAGGISMALVTTVQGLIAALPLMLLHAIVVARSKSIVQVLEEQSAGIIA 442
>gi|212635854|ref|YP_002312379.1| biopolymer transport ExbB protein [Shewanella piezotolerans WP3]
gi|212557338|gb|ACJ29792.1| Biopolymer transport exbB protein [Shewanella piezotolerans WP3]
Length = 209
Score = 82.9 bits (204), Expect = 3e-14, Method: Composition-based stats.
Identities = 27/102 (26%), Positives = 56/102 (54%), Gaps = 2/102 (1%)
Query: 123 RELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYS--NNVVSIPGIIESLI 180
+E+ ++ + + L +S+ L+G+LG VLGM+ FQ++ + + V GI ++L+
Sbjct: 102 QEIAQLKQGMRALEVISALAPLIGLLGTVLGMIDAFQNLQQAGTKVDPAVLSGGISQALL 161
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
+ GL V+IP++ A++ F + ME ++ ++ S
Sbjct: 162 TTAAGLIVAIPTTAAWHFFDTIISQHNAAMEHLLTDYFSLPS 203
>gi|160882690|ref|ZP_02063693.1| hypothetical protein BACOVA_00648 [Bacteroides ovatus ATCC 8483]
gi|156111860|gb|EDO13605.1| hypothetical protein BACOVA_00648 [Bacteroides ovatus ATCC 8483]
Length = 266
Score = 82.9 bits (204), Expect = 3e-14, Method: Composition-based stats.
Identities = 30/199 (15%), Positives = 76/199 (38%), Gaps = 18/199 (9%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE----TVCKSLKNHHNIG 83
++L+ I ++ + I++ + ++F + LE K + +
Sbjct: 72 MSLVAIALVIGLAFCIERIIYLSLAEINTKKFMASIEAA--LEKGDVEAAKDIARNTRGP 129
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
+A+I+ + + D +++ + + + + S++ +
Sbjct: 130 VASIYYQGLMRIDQG-----------IDVVEKSVVSYGGVQAGYLEKGCSWITLFIAMAP 178
Query: 144 LVGILGAVLGMMGFFQSIAGYYS-NNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIED 202
+G LG V+GM+ F I + V G+ +LI+ + GL V++ + YN +
Sbjct: 179 SLGFLGTVIGMVQAFDKIQQVGDISPTVVAGGMKVALITTIFGLIVALILQVFYNYVLSK 238
Query: 203 SKKFAMQMEGFANEFSAIL 221
+ +ME + ++
Sbjct: 239 IEALTSEMEDSSISLLDMV 257
>gi|86151285|ref|ZP_01069500.1| MotA/TolQ/ExbB proton channel family protein [Campylobacter jejuni
subsp. jejuni 260.94]
gi|86154031|ref|ZP_01072232.1| exbB\tolQ family transport protein [Campylobacter jejuni subsp.
jejuni HB93-13]
gi|88597685|ref|ZP_01100918.1| MotA/TolQ/ExbB proton channel family protein [Campylobacter jejuni
subsp. jejuni 84-25]
gi|153952561|ref|YP_001397363.1| MotA/TolQ/ExbB proton channel family protein [Campylobacter jejuni
subsp. doylei 269.97]
gi|157414422|ref|YP_001481678.1| ExbB/TolQ family transport protein [Campylobacter jejuni subsp.
jejuni 81116]
gi|205356484|ref|ZP_03223248.1| exbB/tolQ family transport protein [Campylobacter jejuni subsp.
jejuni CG8421]
gi|218561790|ref|YP_002343569.1| putative MotA/TolQ/ExbB proton channel family protein
[Campylobacter jejuni subsp. jejuni NCTC 11168]
gi|283955553|ref|ZP_06373048.1| exbB/tolQ family transport protein [Campylobacter jejuni subsp.
jejuni 1336]
gi|315123711|ref|YP_004065715.1| exbB\tolQ family transport protein [Campylobacter jejuni subsp.
jejuni ICDCCJ07001]
gi|85841632|gb|EAQ58879.1| MotA/TolQ/ExbB proton channel family protein [Campylobacter jejuni
subsp. jejuni 260.94]
gi|85842445|gb|EAQ59659.1| exbB\tolQ family transport protein [Campylobacter jejuni subsp.
jejuni HB93-13]
gi|88189989|gb|EAQ93965.1| MotA/TolQ/ExbB proton channel family protein [Campylobacter jejuni
subsp. jejuni 84-25]
gi|112359496|emb|CAL34280.1| putative MotA/TolQ/ExbB proton channel family protein
[Campylobacter jejuni subsp. jejuni NCTC 11168]
gi|152940007|gb|ABS44748.1| MotA/TolQ/ExbB proton channel family protein [Campylobacter jejuni
subsp. doylei 269.97]
gi|157385386|gb|ABV51701.1| exbB/tolQ family transport protein [Campylobacter jejuni subsp.
jejuni 81116]
gi|205345671|gb|EDZ32310.1| exbB/tolQ family transport protein [Campylobacter jejuni subsp.
jejuni CG8421]
gi|283793014|gb|EFC31788.1| exbB/tolQ family transport protein [Campylobacter jejuni subsp.
jejuni 1336]
gi|307747066|gb|ADN90336.1| ExbB/tolQ family transport protein [Campylobacter jejuni subsp.
jejuni M1]
gi|315017433|gb|ADT65526.1| exbB\tolQ family transport protein [Campylobacter jejuni subsp.
jejuni ICDCCJ07001]
gi|315926953|gb|EFV06315.1| motA/TolQ/ExbB proton channel family protein [Campylobacter jejuni
subsp. jejuni DFVF1099]
gi|315929750|gb|EFV08921.1| motA/TolQ/ExbB proton channel family protein [Campylobacter jejuni
subsp. jejuni 305]
Length = 184
Score = 82.9 bits (204), Expect = 3e-14, Method: Composition-based stats.
Identities = 33/200 (16%), Positives = 75/200 (37%), Gaps = 30/200 (15%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
IF F + ++ L ++ IL++S++ + T R + +E SLET+
Sbjct: 6 IFHFFNSSSIITYIVLLWLSLYFILAFSILFARLTYLATWRNKEKE---------SLETL 56
Query: 73 CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKL 132
L +I D +++ + L
Sbjct: 57 L--LGEKDLSRTDSILRK------------------CNDTTSNHLEIYKNLASRRASAGL 96
Query: 133 SFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPS 192
++L ++S +G+ G V+ ++ F + S +++ P I E+L++ G+ V+IP+
Sbjct: 97 TWLSIIASTSPFIGLFGTVISILETFGGLGTQNSLSII-APKISEALVATGCGILVAIPA 155
Query: 193 SIAYNKFIEDSKKFAMQMEG 212
+ + + ++
Sbjct: 156 YTFHLIIKRKAFELLSIIDS 175
>gi|258405775|ref|YP_003198517.1| MotA/TolQ/ExbB proton channel [Desulfohalobium retbaense DSM 5692]
gi|257798002|gb|ACV68939.1| MotA/TolQ/ExbB proton channel [Desulfohalobium retbaense DSM 5692]
Length = 218
Score = 82.9 bits (204), Expect = 3e-14, Method: Composition-based stats.
Identities = 38/195 (19%), Positives = 70/195 (35%), Gaps = 21/195 (10%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLA 85
I+ L S+ W +I+ K F RR L W+ +L H +G
Sbjct: 18 GIMWPLLAVSVWMWWLILGKLAFFYRQRRAL-----LPWTSCR-----DNLLRHQPVGAV 67
Query: 86 AIFMSAMSEWKK-SCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLL 144
W+K + I + ++ + + + + ++ L
Sbjct: 68 ---------WQKTLLQTALKWHIQPRQHYTAALNKTARKLERNVGAGVQTILVLAGVAPL 118
Query: 145 VGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIPSSIAYNKFIEDS 203
+G+ G V GM+ F +A S + G I E+L+S GL VS+P + +
Sbjct: 119 LGLFGTVEGMVDTFTVLAHAGSGGASPMAGSISEALLSTQAGLLVSVPGLVLGAFLQRRA 178
Query: 204 KKFAMQMEGFANEFS 218
+ ++ A + S
Sbjct: 179 EGTRRRIRHLALQLS 193
>gi|323344517|ref|ZP_08084742.1| MotA/TolQ/ExbB proton channel family protein [Prevotella oralis
ATCC 33269]
gi|323094644|gb|EFZ37220.1| MotA/TolQ/ExbB proton channel family protein [Prevotella oralis
ATCC 33269]
Length = 278
Score = 82.9 bits (204), Expect = 4e-14, Method: Composition-based stats.
Identities = 33/201 (16%), Positives = 75/201 (37%), Gaps = 18/201 (8%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFI----TLRRQFREFEQLFWSGQSLETVCKSLKNHHNIG 83
++L+ + ++ + I++ + ++ + + G K+L
Sbjct: 86 MSLVALALVIGLAFCIERIIYLSLSEINAKKLMADVDAKIADGDI--EGAKNLCRDTRGP 143
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
+A+I +S +S D I+R + + + + S++ +
Sbjct: 144 VASICYQGLSRIDES-----------IDNIERSVASYGTVQASNLEKGCSWITLFIAMAP 192
Query: 144 LVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIED 202
+G LG V+GM+ F + N V G+ +LI+ + G+ V++ + YN +
Sbjct: 193 SLGFLGTVIGMVMAFDQVQMAGDLNATVVAAGMKVALITTIFGIIVALILQVFYNYILSK 252
Query: 203 SKKFAMQMEGFANEFSAILSR 223
QME A + +
Sbjct: 253 IDHITGQMEESAITLLDSIMK 273
>gi|223038800|ref|ZP_03609092.1| TonB-system energizer ExbB [Campylobacter rectus RM3267]
gi|222879773|gb|EEF14862.1| TonB-system energizer ExbB [Campylobacter rectus RM3267]
Length = 142
Score = 82.5 bits (203), Expect = 4e-14, Method: Composition-based stats.
Identities = 25/88 (28%), Positives = 42/88 (47%), Gaps = 1/88 (1%)
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVS-IPGIIESLISILL 184
E +T L+ L + S VG+LG V G+M F + + S + G+ +L + L
Sbjct: 50 ESMTRNLTTLYIIYSNAPYVGLLGTVAGIMVTFYDMGMSGGIDTKSIMVGLSLALKATAL 109
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEG 212
GL V+IP+ + YN F+ + +
Sbjct: 110 GLIVAIPTLMIYNAFMRKVDVLVNRYKA 137
>gi|32477300|ref|NP_870294.1| tolQ-type transport protein [Rhodopirellula baltica SH 1]
gi|32447851|emb|CAD77369.1| probable tolQ-type transport protein [Rhodopirellula baltica SH 1]
Length = 319
Score = 82.5 bits (203), Expect = 4e-14, Method: Composition-based stats.
Identities = 38/207 (18%), Positives = 80/207 (38%), Gaps = 13/207 (6%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
I + +L + G + + + S+L ++ ++++++ T + R +
Sbjct: 79 IDLLSLIARGGRF----MIPIGLMSMLVVTLSVERTLSLRTEKILPRSLVNQ------IS 128
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
+ + + I + S + I+R A+ RE +
Sbjct: 129 DLAATHETFPPSTAQEICVENPSPAARVISAMLMRTGQPLGDIERTASDALQREADRYAG 188
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQS---IAGYYSNNVVSIPGIIESLISILLGLC 187
+ +L ++A L+G+LG V GM+ F + S + GI +L++ L GL
Sbjct: 189 PVRWLTLAAAATPLMGLLGTVWGMIVAFHESSTLTADRSRSEQLSEGIYTALVTTLAGLA 248
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFA 214
V+IP++I K ++E A
Sbjct: 249 VAIPAAILAQYLENRIAKLFHRIEEMA 275
>gi|15612123|ref|NP_223775.1| biopolymer transport protein [Helicobacter pylori J99]
gi|9910671|sp|Q9ZK83|EXBL1_HELPJ RecName: Full=Putative biopolymer transport protein exbB-like 1
gi|4155649|gb|AAD06637.1| BIOPOLYMER TRANSPORT PROTEIN [Helicobacter pylori J99]
Length = 189
Score = 82.5 bits (203), Expect = 4e-14, Method: Composition-based stats.
Identities = 34/210 (16%), Positives = 80/210 (38%), Gaps = 28/210 (13%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFI-TLRRQFREFEQLFWSGQSLE 70
SI F + G ++ + ++ +++ V + KS+ LRR+ +
Sbjct: 4 SIVYFFNKSGFVTTLVLVWISLYLVMTLWVFLYKSIVLKIELRREM-------------Q 50
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
++ L + +F K++ + S +Q +++ + T
Sbjct: 51 SLSNILNGAQDAPEHFMFNK-----KRNDETKRYSNELLQAWKHQVLKQS--------TT 97
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-VVSIPGIIESLISILLGLCVS 189
L L +SS +G+ G V+ ++ F ++ + V P I ++LI+ G+ +
Sbjct: 98 GLVVLSIISSTAPFIGLFGTVVEILEAFNNLGALGQASFGVIAPIISKALIATAAGILAA 157
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
IP+ Y ++ ++ + S+
Sbjct: 158 IPAYSFYLILKRKVYDLSVYVQMQVDILSS 187
>gi|260590600|ref|ZP_05856058.1| MotA/TolQ/ExbB proton channel family protein [Prevotella veroralis
F0319]
gi|260537425|gb|EEX20042.1| MotA/TolQ/ExbB proton channel family protein [Prevotella veroralis
F0319]
Length = 276
Score = 82.5 bits (203), Expect = 4e-14, Method: Composition-based stats.
Identities = 33/198 (16%), Positives = 71/198 (35%), Gaps = 17/198 (8%)
Query: 31 LFIFS-ILSWSVIIQKSVNFITLRRQFREFEQLFWS---GQSLETVCKSLKNHHNIGLAA 86
L S +L + I++ + + F + + K+L +A+
Sbjct: 86 LVALSLVLGLAFCIERIIYLSLSEIDAKRFVGKLENMIEAGDI-EGAKTLSRDTRGPVAS 144
Query: 87 IFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVG 146
I + S D I+R + + + + + S++ + +G
Sbjct: 145 ICYQGLLRIDDS-----------IDNIERSVTSYGSVQSANLEKGCSWITLFIAMAPSLG 193
Query: 147 ILGAVLGMMGFFQSIAGYYS-NNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKK 205
LG V+GM+ F I + + G+ +LI+ + G+ V++ + YN + +
Sbjct: 194 FLGTVIGMVMAFDQIQEAGDISPTIVAAGMKVALITTIFGIIVALVLQVFYNYILSKIEH 253
Query: 206 FAMQMEGFANEFSAILSR 223
QME A + +
Sbjct: 254 ITAQMEESAISLLDAIMK 271
>gi|255691320|ref|ZP_05414995.1| MotA/TolQ/ExbB proton channel family protein [Bacteroides
finegoldii DSM 17565]
gi|260622962|gb|EEX45833.1| MotA/TolQ/ExbB proton channel family protein [Bacteroides
finegoldii DSM 17565]
Length = 267
Score = 82.5 bits (203), Expect = 4e-14, Method: Composition-based stats.
Identities = 30/199 (15%), Positives = 76/199 (38%), Gaps = 18/199 (9%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE----TVCKSLKNHHNIG 83
++L+ I ++ + I++ + ++F + LE K + +
Sbjct: 73 MSLVAIALVIGLAFCIERIIYLSLAEINTKKFMASIEAA--LEKGDVEAAKDIARNTRGP 130
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
+A+I+ + + D +++ + + + + S++ +
Sbjct: 131 VASIYYQGLMRIDQG-----------IDVVEKSVVSYGGVQAGYLEKGCSWITLFIAMAP 179
Query: 144 LVGILGAVLGMMGFFQSIAGYYS-NNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIED 202
+G LG V+GM+ F I + V G+ +LI+ + GL V++ + YN +
Sbjct: 180 SLGFLGTVIGMVQAFDKIQQVGDISPTVVAGGMKVALITTIFGLIVALILQVFYNYVLSK 239
Query: 203 SKKFAMQMEGFANEFSAIL 221
+ +ME + ++
Sbjct: 240 IEALTSEMEDSSISLLDMV 258
>gi|150004492|ref|YP_001299236.1| putative biopolymer transport protein [Bacteroides vulgatus ATCC
8482]
gi|254882774|ref|ZP_05255484.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
gi|294778251|ref|ZP_06743677.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Bacteroides vulgatus PC510]
gi|319643918|ref|ZP_07998493.1| biopolymer transporter [Bacteroides sp. 3_1_40A]
gi|149932916|gb|ABR39614.1| putative biopolymer transport protein [Bacteroides vulgatus ATCC
8482]
gi|254835567|gb|EET15876.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
gi|294447879|gb|EFG16453.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Bacteroides vulgatus PC510]
gi|317384442|gb|EFV65409.1| biopolymer transporter [Bacteroides sp. 3_1_40A]
Length = 257
Score = 82.5 bits (203), Expect = 4e-14, Method: Composition-based stats.
Identities = 31/201 (15%), Positives = 76/201 (37%), Gaps = 18/201 (8%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITL----RRQFREFEQLFWSGQSLETVCKSLKNHHNIG 83
++L+ I +L + I++ + ++ E G K++ +
Sbjct: 63 MSLVAIALVLGLAFCIERIIYLSLAETNTKKLMANIEAALEKGDV--EAAKTVCRNTRGP 120
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
+A+I + + D ++R + + + + S++ +
Sbjct: 121 VASICYQGLMRIDEG-----------IDVVERSVVSYGGVQAGYLEKGCSWITLFIAMAP 169
Query: 144 LVGILGAVLGMMGFFQSIAGYYS-NNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIED 202
+G LG V+GM+ F I + V G+ +LI+ + GL V++ + YN +
Sbjct: 170 SLGFLGTVIGMVMAFDKIQQAGDISPTVVAGGMKVALITTIFGLVVALILQVFYNYILSK 229
Query: 203 SKKFAMQMEGFANEFSAILSR 223
+ +ME + ++++
Sbjct: 230 IEGLTSEMEDSSITLLDMITK 250
>gi|149375218|ref|ZP_01892990.1| Biopolymer transport protein [Marinobacter algicola DG893]
gi|149360582|gb|EDM49034.1| Biopolymer transport protein [Marinobacter algicola DG893]
Length = 214
Score = 82.5 bits (203), Expect = 4e-14, Method: Composition-based stats.
Identities = 30/214 (14%), Positives = 86/214 (40%), Gaps = 20/214 (9%)
Query: 17 FMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQL----FWSGQSLETV 72
F + G + I +L + ++ +++ + ++RR+ R + + +
Sbjct: 9 FQEGGPFMYPIAIVLA----VGLAITVERFIYLASIRRRNRLAFEKGILPLLRKRDYQRA 64
Query: 73 CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKL 132
K+ + + +A+I + + G ++ ++ M+ + L + ++
Sbjct: 65 MKAATS-SDSAIASIMSAGI---------GRLLNNHPREDVEYAMEEGLMEVLPRLEKRT 114
Query: 133 SFLGSMSSAGLLVGILGAVLGMMGFFQSIAGY--YSNNVVSIPGIIESLISILLGLCVSI 190
+L ++++ L+G+LG ++G++ F ++A + I ++ + GL +I
Sbjct: 115 QYLATLANIATLLGLLGTIIGLIAAFTAVAAADPSQKASLLSESISVAMNTTAFGLMSAI 174
Query: 191 PSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
P + + + + E + I+S Q
Sbjct: 175 PLLMFHALLQTRTNEIVDSFEMAGVKLLNIISEQ 208
>gi|152993352|ref|YP_001359073.1| biopolymer ExbB/TolQ family transporter [Sulfurovum sp. NBC37-1]
gi|151425213|dbj|BAF72716.1| biopolymer transport protein, ExbB/TolQ family [Sulfurovum sp.
NBC37-1]
Length = 190
Score = 82.5 bits (203), Expect = 4e-14, Method: Composition-based stats.
Identities = 34/193 (17%), Positives = 81/193 (41%), Gaps = 26/193 (13%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLET 71
S+ F+ ++ LL ++ I+++ V + + + + + +SGQS
Sbjct: 3 SLLDYFINSSAITIFVLLLLSVYFIVTFWVFLDRYYILNSRIKSEARSLKSLYSGQS--- 59
Query: 72 VCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEK 131
K+ + L ++S ++ K+ +++ A + + T+
Sbjct: 60 -----KSVMSNSLIFTYLSRVNTPNKA-----------------ILEAAASDAIRVSTKG 97
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSI 190
L++L ++S +G+ G V+G++ F + S ++ V P I E+LI+ G+ V+I
Sbjct: 98 LTWLSIIASTAPFIGLFGTVIGILETFSKLGDQSSASLSVVAPAIAEALIATAAGIAVAI 157
Query: 191 PSSIAYNKFIEDS 203
+ + +
Sbjct: 158 FAYTFHLILKRKA 170
>gi|303235536|ref|ZP_07322145.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Prevotella disiens FB035-09AN]
gi|302484273|gb|EFL47259.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Prevotella disiens FB035-09AN]
Length = 284
Score = 82.5 bits (203), Expect = 4e-14, Method: Composition-based stats.
Identities = 32/195 (16%), Positives = 72/195 (36%), Gaps = 14/195 (7%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS--GQSLETVCKSLKNHHNIGLA 85
++L+ + ++ + I++ + ++F + K L + +A
Sbjct: 92 MSLVALALVIGLAFCIERIIYLSLSEINAKKFMANIDDCIAANDIEGAKELSRNTRGPVA 151
Query: 86 AIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLV 145
AI + S + I+R + + + + + S++ + +
Sbjct: 152 AICYQGLLRIDSS-----------IEDIERSVASYGSVQSANLEKGCSWITLFIAMAPSL 200
Query: 146 GILGAVLGMMGFFQSIAGYYS-NNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSK 204
G LG V+GM+ F I + + G+ +LI+ + G+ V++ I YN + +
Sbjct: 201 GFLGTVIGMVMSFDQIQMAGDISPTIVASGMKVALITTIFGIIVALVLQIFYNYILSKIE 260
Query: 205 KFAMQMEGFANEFSA 219
QME A
Sbjct: 261 HLTAQMEESAISLLD 275
>gi|304315157|ref|YP_003850304.1| biopolymer transport protein [Methanothermobacter marburgensis str.
Marburg]
gi|302588616|gb|ADL58991.1| predicted biopolymer transport protein [Methanothermobacter
marburgensis str. Marburg]
Length = 279
Score = 82.5 bits (203), Expect = 4e-14, Method: Composition-based stats.
Identities = 36/205 (17%), Positives = 81/205 (39%), Gaps = 23/205 (11%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFR-----EFEQLFWSG 66
++ +F G+ I I S I+K + R + + G
Sbjct: 12 TVLEMFRSGGVITYIIAITGVYGFITS----IEKIHYLRKISRVSTPQIIGKVNESMEKG 67
Query: 67 QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
+LE + + + + N ++ I A+ ++ + ++ M+ E+
Sbjct: 68 GALEAL-REIGQYQN-PVSKIISEALKIGYRNRSE-----------VEDAMERVFIVEMS 114
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGL 186
+T+ L L ++ ++G++G V+G+ F+++ G ++ GI +LI+ +LGL
Sbjct: 115 NMTKGLGTLRTIIEVAPMLGLIGTVIGIWYTFRAL-GVNADPAAMAEGIYVALITTILGL 173
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQME 211
V+I Y+ ++E
Sbjct: 174 AVAIILMPLYSYITGRIDDEIDKIE 198
>gi|237750910|ref|ZP_04581390.1| biopolymer transporter [Helicobacter bilis ATCC 43879]
gi|229373355|gb|EEO23746.1| biopolymer transporter [Helicobacter bilis ATCC 43879]
Length = 217
Score = 82.5 bits (203), Expect = 4e-14, Method: Composition-based stats.
Identities = 34/204 (16%), Positives = 74/204 (36%), Gaps = 28/204 (13%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
+ + F G+ +I L ++ I + + I K ++ + SL+ +
Sbjct: 4 LVSFFETSGVITLLVIFWLSLYVIATLWIFIYKWFVIRGIQDR---------ETYSLDLL 54
Query: 73 CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKL 132
L +I +A+F +S S +Q +++ A + L
Sbjct: 55 ---LSKDISIPQSAVFA-------RSKGHRLLSKEMLQVWKSQILKNA--------SGGL 96
Query: 133 SFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIP 191
+FL +SS +G+ G V ++ F + V P I ++L++ G+ +IP
Sbjct: 97 TFLSIVSSTAPFIGLFGTVTEILDAFAHLGSQGQATFEVIAPIISKALVATAWGILCAIP 156
Query: 192 SSIAYNKFIEDSKKFAMQMEGFAN 215
+ Y + ++ +
Sbjct: 157 AYSFYLILKRKIAVLGVCLQAQID 180
>gi|254483016|ref|ZP_05096251.1| transporter, MotA/TolQ/ExbB proton channel family protein [marine
gamma proteobacterium HTCC2148]
gi|214036701|gb|EEB77373.1| transporter, MotA/TolQ/ExbB proton channel family protein [marine
gamma proteobacterium HTCC2148]
Length = 450
Score = 82.5 bits (203), Expect = 4e-14, Method: Composition-based stats.
Identities = 25/117 (21%), Positives = 57/117 (48%), Gaps = 1/117 (0%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-V 169
+ + +D A+ E+ + + ++ L+G+LG V GM+ FQ+I+ + + +
Sbjct: 333 ELVQLKLDEAVLAEIPALERGNGLIKLFAATSPLLGLLGTVTGMILTFQAISLFGTGDPK 392
Query: 170 VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+ GI ++L++ +LGL V+IP ++ S+ +++ A + + E
Sbjct: 393 LMAGGISQALMTTVLGLVVAIPLLFGHSVVAYLSRVMVQRLDEQCAGVLARSAEKQE 449
>gi|51246825|ref|YP_066709.1| biopolymer transport protein ExbB [Desulfotalea psychrophila LSv54]
gi|50877862|emb|CAG37702.1| related to biopolymer transport protein (ExbB) [Desulfotalea
psychrophila LSv54]
Length = 174
Score = 82.5 bits (203), Expect = 4e-14, Method: Composition-based stats.
Identities = 24/110 (21%), Positives = 51/110 (46%), Gaps = 2/110 (1%)
Query: 112 RIDRMM-DVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYY-SNNV 169
R DR++ + + +E+ S + ++ +G+ G V GM+ FQS+A + +N
Sbjct: 62 RHDRLLYEYLLVSCQQEMKSGHSTIKIFATIAPFLGLFGTVTGMIRTFQSVATFGLANPR 121
Query: 170 VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
GI E++++ GL V++P A + + ++E + +
Sbjct: 122 ALAGGISEAMVTTQFGLLVAVPGVFALYFLHRGASRRLAKIEQITADLVS 171
>gi|298385077|ref|ZP_06994636.1| MotA/TolQ/ExbB proton channel family protein [Bacteroides sp.
1_1_14]
gi|298262221|gb|EFI05086.1| MotA/TolQ/ExbB proton channel family protein [Bacteroides sp.
1_1_14]
Length = 258
Score = 82.5 bits (203), Expect = 4e-14, Method: Composition-based stats.
Identities = 30/199 (15%), Positives = 76/199 (38%), Gaps = 18/199 (9%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE----TVCKSLKNHHNIG 83
++L+ I ++ + I++ + ++F + LE K + +
Sbjct: 64 MSLVAIALVIGLAFCIERIIYLSLAEINTKKFMASIEAA--LEKGDVEAAKDIARNTRGP 121
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
+A+I+ + + D +++ + + + + S++ +
Sbjct: 122 VASIYYQGLMRIDQG-----------IDVVEKSVVSYGGVQAGYLEKGCSWITLFIAMAP 170
Query: 144 LVGILGAVLGMMGFFQSIAGYYS-NNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIED 202
+G LG V+GM+ F I + V G+ +LI+ + GL V++ + YN +
Sbjct: 171 SLGFLGTVIGMVQAFDKIQQVGDISPTVVAGGMKVALITTIFGLIVALILQVFYNYVLAK 230
Query: 203 SKKFAMQMEGFANEFSAIL 221
+ +ME + ++
Sbjct: 231 IEALTSEMEDSSISLLDMV 249
>gi|208435027|ref|YP_002266693.1| biopolymer transport protein [Helicobacter pylori G27]
gi|210135289|ref|YP_002301728.1| biopolymer transport accessory protein ExbB [Helicobacter pylori
P12]
gi|308184870|ref|YP_003929003.1| biopolymer transport protein [Helicobacter pylori SJM180]
gi|208432956|gb|ACI27827.1| biopolymer transport protein [Helicobacter pylori G27]
gi|210133257|gb|ACJ08248.1| biopolymer transport accessory protein ExbB [Helicobacter pylori
P12]
gi|308060790|gb|ADO02686.1| biopolymer transport protein [Helicobacter pylori SJM180]
Length = 189
Score = 82.5 bits (203), Expect = 4e-14, Method: Composition-based stats.
Identities = 34/210 (16%), Positives = 80/210 (38%), Gaps = 28/210 (13%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFI-TLRRQFREFEQLFWSGQSLE 70
SI F + G ++ + ++ +++ V + KS+ LRR+ +
Sbjct: 4 SIVYFFNKSGFVTTLVLVWISLYLVMTLWVFLYKSIVLKIELRREM-------------Q 50
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
++ L + +F K++ + S +Q +++ + T
Sbjct: 51 SLSNILNGAQDAPEHFMFNK-----KRNDETKRYSNELLQAWKHQVLKQS--------TT 97
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-VVSIPGIIESLISILLGLCVS 189
L L +SS +G+ G V+ ++ F ++ + V P I ++LI+ G+ +
Sbjct: 98 GLVVLSIISSTAPFIGLFGTVVEILEAFNNLGALGQASFGVIAPIISKALIATAAGILAA 157
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
IP+ Y ++ ++ + S+
Sbjct: 158 IPAYSFYLILKRKVYDLSVYVQMQVDILSS 187
>gi|317177880|dbj|BAJ55669.1| biopolymer transport protein [Helicobacter pylori F16]
Length = 189
Score = 82.5 bits (203), Expect = 4e-14, Method: Composition-based stats.
Identities = 33/210 (15%), Positives = 80/210 (38%), Gaps = 28/210 (13%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFI-TLRRQFREFEQLFWSGQSLE 70
SI F + G ++ + ++ +++ V + KS+ L+R+ +
Sbjct: 4 SIVYFFNKSGFVTTLVLIWISLYLVMTLWVFLYKSIVLKIELKREM-------------Q 50
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
++ L + +F K++ + S +Q +++ + T
Sbjct: 51 SLSNILNGVQDAPEHFMFNK-----KRNDETKRYSNELLQAWKHQVLKQS--------TT 97
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-VVSIPGIIESLISILLGLCVS 189
L L +SS +G+ G V+ ++ F ++ + V P I ++LI+ G+ +
Sbjct: 98 GLVVLSIISSTAPFIGLFGTVVEILEAFNNLGALGQASFGVIAPIISKALIATAAGILAA 157
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
IP+ Y ++ ++ + S+
Sbjct: 158 IPAYSFYLILKRKVYDLSVYVQMQVDILSS 187
>gi|291276669|ref|YP_003516441.1| ExbB/TolQ family transport protein [Helicobacter mustelae 12198]
gi|290963863|emb|CBG39699.1| exbB\tolQ family transport protein [Helicobacter mustelae 12198]
Length = 186
Score = 82.5 bits (203), Expect = 4e-14, Method: Composition-based stats.
Identities = 33/194 (17%), Positives = 72/194 (37%), Gaps = 31/194 (15%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+S+ F G+ ++ L ++ I++ + I + + + R R +G+S
Sbjct: 2 LSLQGYFYDSGMVTLIVLLWLSLYLIVTLWIFIYRFMILSRMYRNQRASLSAIVNGKS-- 59
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
+ +F K A S + ++ + A
Sbjct: 60 -----------RAPSDVFFEG---------KHAASEDFLLIWKHSILRQSTAM------- 92
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVS 189
LSFL ++S +G+ G V+ ++ F + G + V P I ++L++ G+ V+
Sbjct: 93 -LSFLSIIASTAPFIGLFGTVVEILDAFSRLGGSGQISFDVIAPIISKALVATAGGILVA 151
Query: 190 IPSSIAYNKFIEDS 203
IP+ + +
Sbjct: 152 IPAYSFFLILKRKA 165
>gi|317180862|dbj|BAJ58648.1| biopolymer transport protein [Helicobacter pylori F32]
Length = 189
Score = 82.5 bits (203), Expect = 4e-14, Method: Composition-based stats.
Identities = 32/210 (15%), Positives = 79/210 (37%), Gaps = 28/210 (13%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFI-TLRRQFREFEQLFWSGQSLE 70
SI F + G ++ + ++ +++ V + KS+ L+R+ +
Sbjct: 4 SIVYFFNKSGFVTTLVLVWISLYLVMTLWVFLYKSIVLKIELKREM-------------Q 50
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
++ L + +F + I+ + ++ + L++ T
Sbjct: 51 SLSNILNGVQDAPEHFMF-------------NKKRNDEIKRYSNELLQAWKHQVLKQSTT 97
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-VVSIPGIIESLISILLGLCVS 189
L L +SS +G+ G V+ ++ F ++ + V P I ++LI+ G+ +
Sbjct: 98 GLVVLSIISSTAPFIGLFGTVVEILEAFNNLGALGQASFGVIAPIISKALIATAAGILAA 157
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
IP+ Y ++ ++ + S+
Sbjct: 158 IPAYSFYLILKRKVYDLSVYVQMQVDILSS 187
>gi|153808873|ref|ZP_01961541.1| hypothetical protein BACCAC_03174 [Bacteroides caccae ATCC 43185]
gi|149128699|gb|EDM19917.1| hypothetical protein BACCAC_03174 [Bacteroides caccae ATCC 43185]
Length = 266
Score = 82.5 bits (203), Expect = 4e-14, Method: Composition-based stats.
Identities = 30/199 (15%), Positives = 76/199 (38%), Gaps = 18/199 (9%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE----TVCKSLKNHHNIG 83
++L+ I ++ + I++ + ++F + LE K + +
Sbjct: 72 MSLVAIALVIGLAFCIERIIYLSLAEINTKKFMASIEAA--LEKGDVEAAKDIARNTRGP 129
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
+A+I+ + + D +++ + + + + S++ +
Sbjct: 130 VASIYYQGLMRIDQG-----------IDVVEKSVVSYGGVQAGYLEKGCSWITLFIAMAP 178
Query: 144 LVGILGAVLGMMGFFQSIAGYYS-NNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIED 202
+G LG V+GM+ F I + V G+ +LI+ + GL V++ + YN +
Sbjct: 179 SLGFLGTVIGMVQAFDKIQQVGDISPTVVAGGMKVALITTIFGLIVALILQVFYNYVLSK 238
Query: 203 SKKFAMQMEGFANEFSAIL 221
+ +ME + ++
Sbjct: 239 IEALTSEMEDSSISLLDMV 257
>gi|119774392|ref|YP_927132.1| MotA/TolQ/ExbB proton channel family protein [Shewanella
amazonensis SB2B]
gi|119766892|gb|ABL99462.1| MotA/TolQ/ExbB proton channel family protein [Shewanella
amazonensis SB2B]
Length = 451
Score = 82.5 bits (203), Expect = 5e-14, Method: Composition-based stats.
Identities = 26/134 (19%), Positives = 60/134 (44%), Gaps = 1/134 (0%)
Query: 87 IFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVG 146
+ + + + + ++ +D AI +E I ++S + +++ ++G
Sbjct: 310 VANPGNNALGRILKVYQDNKDADVETLELKLDEAILKETPAIETRISIIKVLAAIAPMMG 369
Query: 147 ILGAVLGMMGFFQSIAGYYSNN-VVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKK 205
+LG V GM+ FQSI + + + + GI +L++ + GL ++P + + + SK
Sbjct: 370 LLGTVTGMIATFQSIQLFGTGDPKLMAGGISMALVTTVQGLVAALPLMLVHAIVVARSKT 429
Query: 206 FAMQMEGFANEFSA 219
+E + A
Sbjct: 430 IVQTLEEQSAGIIA 443
>gi|294141736|ref|YP_003557714.1| MotA/TolQ/ExbB proton channel family protein [Shewanella violacea
DSS12]
gi|293328205|dbj|BAJ02936.1| MotA/TolQ/ExbB proton channel family protein [Shewanella violacea
DSS12]
Length = 451
Score = 82.5 bits (203), Expect = 5e-14, Method: Composition-based stats.
Identities = 25/110 (22%), Positives = 57/110 (51%), Gaps = 1/110 (0%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-V 169
+ ++ +D AI +E + ++S + +++ ++G+LG V GM+ FQSI + +++
Sbjct: 334 ETLELKLDEAILKETPALEARISIIKVLAAIAPMMGLLGTVTGMIATFQSIQLFGTSDPK 393
Query: 170 VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
+ GI +L++ + GL ++P + + + SK +E + A
Sbjct: 394 LMAGGISMALMTTVQGLVAALPLMLMHAIVVARSKSIVQVLEEQSAGMVA 443
>gi|237720120|ref|ZP_04550601.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
gi|260174035|ref|ZP_05760447.1| putative biopolymer transport protein [Bacteroides sp. D2]
gi|293373958|ref|ZP_06620300.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Bacteroides ovatus SD CMC 3f]
gi|299147998|ref|ZP_07041061.1| MotA/TolQ/ExbB proton channel family protein [Bacteroides sp.
3_1_23]
gi|315922304|ref|ZP_07918544.1| conserved hypothetical protein [Bacteroides sp. D2]
gi|229450672|gb|EEO56463.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
gi|292631179|gb|EFF49815.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Bacteroides ovatus SD CMC 3f]
gi|298514181|gb|EFI38067.1| MotA/TolQ/ExbB proton channel family protein [Bacteroides sp.
3_1_23]
gi|313696179|gb|EFS33014.1| conserved hypothetical protein [Bacteroides sp. D2]
Length = 266
Score = 82.5 bits (203), Expect = 5e-14, Method: Composition-based stats.
Identities = 30/199 (15%), Positives = 76/199 (38%), Gaps = 18/199 (9%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE----TVCKSLKNHHNIG 83
++L+ I ++ + I++ + ++F + LE K + +
Sbjct: 72 MSLVAIALVIGLAFCIERIIYLSLAEINTKKFMASIEAA--LEKGDVEAAKDIARNTRGP 129
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
+A+I+ + + D +++ + + + + S++ +
Sbjct: 130 VASIYYQGLMRIDQG-----------IDVVEKSVVSYGGVQAGYLEKGCSWITLFIAMAP 178
Query: 144 LVGILGAVLGMMGFFQSIAGYYS-NNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIED 202
+G LG V+GM+ F I + V G+ +LI+ + GL V++ + YN +
Sbjct: 179 SLGFLGTVIGMVQAFDKIQQVGDISPTVVAGGMKVALITTIFGLIVALILQVFYNYVLSK 238
Query: 203 SKKFAMQMEGFANEFSAIL 221
+ +ME + ++
Sbjct: 239 IEALTSEMEDSSISLLDMV 257
>gi|118474543|ref|YP_892022.1| TonB-system energizer ExbB [Campylobacter fetus subsp. fetus 82-40]
gi|118413769|gb|ABK82189.1| TonB-system energizer ExbB [Campylobacter fetus subsp. fetus 82-40]
Length = 137
Score = 82.5 bits (203), Expect = 5e-14, Method: Composition-based stats.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVS-IPGIIESLISILL 184
E++T+ L+ L + + +G+LG V G+M F + + S + G+ +L + L
Sbjct: 50 EDLTKNLTILYIIYTNAPYIGLLGTVAGIMITFYDMGMSGGIDTKSIMIGLSLALKATAL 109
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEG 212
GL V+IP+ I YN FI F + E
Sbjct: 110 GLIVAIPTLIIYNGFIRKVDVFLNRYES 137
>gi|150010300|ref|YP_001305043.1| MotA/TolQ/ExbB proton channel family protein biopolymer transport
protein [Parabacteroides distasonis ATCC 8503]
gi|255012434|ref|ZP_05284560.1| MotA/TolQ/ExbB proton channel family protein, putative biopolymer
transport protein [Bacteroides sp. 2_1_7]
gi|256839151|ref|ZP_05544661.1| conserved hypothetical protein [Parabacteroides sp. D13]
gi|262382415|ref|ZP_06075552.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
gi|149938724|gb|ABR45421.1| MotA/TolQ/ExbB proton channel family protein, putative biopolymer
transport protein [Parabacteroides distasonis ATCC 8503]
gi|256740070|gb|EEU53394.1| conserved hypothetical protein [Parabacteroides sp. D13]
gi|262295293|gb|EEY83224.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
Length = 247
Score = 82.5 bits (203), Expect = 5e-14, Method: Composition-based stats.
Identities = 27/198 (13%), Positives = 70/198 (35%), Gaps = 20/198 (10%)
Query: 33 IFSILSWSVII------QKSVNFITLRRQFREFEQLFWSGQSLE--TVCKSLKNHHNIGL 84
S+++ ++I ++ + + + K++ +
Sbjct: 52 FMSLVAIALIFGLAFCLERIIYLNLAETNSSKLLKGIEDALDKGDVEGAKAIARDTRGPI 111
Query: 85 AAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLL 144
A+I + + D +++ + + + + +S++ +
Sbjct: 112 ASIAYQGLMRIDQG-----------IDVVEKSIVSYGGVQGGLLEKNMSWITLFIAMAPS 160
Query: 145 VGILGAVLGMMGFFQSIAGYYS-NNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDS 203
+G LG V+GM+ F I + V G+ +LI+ + GL V++ + YN +
Sbjct: 161 LGFLGTVVGMIMAFDKIEQVGDISPTVVAGGMKVALITTVGGLIVALILQVFYNYLLSKL 220
Query: 204 KKFAMQMEGFANEFSAIL 221
+ QME + ++
Sbjct: 221 EAILNQMEDASISLLDLV 238
>gi|108563493|ref|YP_627809.1| biopolymer transport protein [Helicobacter pylori HPAG1]
gi|207092449|ref|ZP_03240236.1| biopolymer transport protein [Helicobacter pylori HPKX_438_AG0C1]
gi|107837266|gb|ABF85135.1| biopolymer transport protein [Helicobacter pylori HPAG1]
Length = 189
Score = 82.2 bits (202), Expect = 5e-14, Method: Composition-based stats.
Identities = 33/210 (15%), Positives = 80/210 (38%), Gaps = 28/210 (13%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFI-TLRRQFREFEQLFWSGQSLE 70
SI F + G ++ + ++ +++ V + KS+ L+R+ +
Sbjct: 4 SIVYFFNKSGFVTTLVLVWISLYLVMTLWVFLYKSIVLKIELKREM-------------Q 50
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
++ L + +F K++ + S +Q +++ + T
Sbjct: 51 SLSNILNGAQDAPEHFMFNK-----KRNDETKRYSNELLQAWKHQVLKQS--------TT 97
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-VVSIPGIIESLISILLGLCVS 189
L L +SS +G+ G V+ ++ F ++ + V P I ++LI+ G+ +
Sbjct: 98 GLVVLSIISSTAPFIGLFGTVVEILEAFNNLGALGQASFGVIAPIISKALIATAAGILAA 157
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
IP+ Y ++ ++ + S+
Sbjct: 158 IPAYSFYLILKRKVYDLSVYVQMQVDILSS 187
>gi|288941959|ref|YP_003444199.1| MotA/TolQ/ExbB proton channel [Allochromatium vinosum DSM 180]
gi|288897331|gb|ADC63167.1| MotA/TolQ/ExbB proton channel [Allochromatium vinosum DSM 180]
Length = 248
Score = 82.2 bits (202), Expect = 5e-14, Method: Composition-based stats.
Identities = 42/177 (23%), Positives = 73/177 (41%), Gaps = 12/177 (6%)
Query: 40 SVIIQKSVNFITLR--RQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKK 97
++++ K F LR R E L QS ++ +A + A+
Sbjct: 47 AIVLLKLWQFHRLRLDRLAPVRESLRRWQQSDARAAIAVVAGRTQPVAQLVHLAL----- 101
Query: 98 SCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGF 157
G P + + + LE + L L + + L+G+LG VLGM+
Sbjct: 102 ---VGLHRPQVDIALLREELTRVASLHLERLRSHLRALEIIGTLSPLLGLLGTVLGMIEA 158
Query: 158 FQSI--AGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEG 212
F+ + AG + + GI ++L++ +GL V+IP IA+ ++ A QME
Sbjct: 159 FRQLETAGSQVDPAILSGGIWQALLTTAVGLTVAIPVVIAHTWLERRVERCAHQMED 215
>gi|15679040|ref|NP_276157.1| biopolymer transport protein [Methanothermobacter
thermautotrophicus str. Delta H]
gi|3915401|sp|O27101|Y1022_METTH RecName: Full=Putative biopolymer transport protein exbB homolog
gi|2622125|gb|AAB85518.1| biopolymer transport protein [Methanothermobacter
thermautotrophicus str. Delta H]
Length = 279
Score = 82.2 bits (202), Expect = 5e-14, Method: Composition-based stats.
Identities = 34/205 (16%), Positives = 80/205 (39%), Gaps = 23/205 (11%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFR-----EFEQLFWSG 66
++ +F G+ I + I + ++K + R + G
Sbjct: 12 TVLEMFRSGGVITYLIAAI----GIYGFITALEKIHYLRKISRVSTPQIIGAVNESMEKG 67
Query: 67 QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
+LE + + + + N ++ I A+ ++ + ++ M+ E+
Sbjct: 68 GALEAL-REIGQYQN-PVSKIISEALKIGYRNRSE-----------VEDAMERVFIVEMS 114
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGL 186
+T L L ++ ++G++G V+G+ F+++ G ++ GI +LI+ +LGL
Sbjct: 115 NMTRGLGTLRTIIEVAPMLGLIGTVIGIWYTFRAL-GVNADPAAMAEGIYVALITTILGL 173
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQME 211
V+I Y+ ++E
Sbjct: 174 AVAIILMPLYSYITGRIDDEIDKIE 198
>gi|330878433|gb|EGH12582.1| biopolymer transport protein ExbB [Pseudomonas syringae pv.
morsprunorum str. M302280PT]
Length = 100
Score = 82.2 bits (202), Expect = 5e-14, Method: Composition-based stats.
Identities = 24/78 (30%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 147 ILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIPSSIAYNKFIEDSKK 205
+ G V G+M QSI S ++ ++ G I +L++ +G+ V++P+ + YN F+ K
Sbjct: 1 MFGTVWGIMEALQSIGVTGSASLEAVAGPIGHALVATGVGIAVAVPAVLIYNFFLRRLKL 60
Query: 206 FAMQMEGFANEFSAILSR 223
M+ FA++F A+ R
Sbjct: 61 AVADMDDFAHDFDALAQR 78
>gi|188527913|ref|YP_001910600.1| biopolymer transport protein [Helicobacter pylori Shi470]
gi|308183234|ref|YP_003927361.1| biopolymer transport protein [Helicobacter pylori PeCan4]
gi|188144153|gb|ACD48570.1| biopolymer transport protein [Helicobacter pylori Shi470]
gi|308062406|gb|ADO04294.1| biopolymer transport protein [Helicobacter pylori Cuz20]
gi|308065419|gb|ADO07311.1| biopolymer transport protein [Helicobacter pylori PeCan4]
Length = 189
Score = 82.2 bits (202), Expect = 5e-14, Method: Composition-based stats.
Identities = 33/210 (15%), Positives = 80/210 (38%), Gaps = 28/210 (13%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFI-TLRRQFREFEQLFWSGQSLE 70
SI F + G ++ + ++ +++ V + KS+ L+R+ +
Sbjct: 4 SIVYFFNKSGFVTTLVLVWISLYLVMTLWVFLYKSIVLKIELKREM-------------Q 50
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
++ L + +F K++ + S +Q +++ + T
Sbjct: 51 SLSNILNGAQDAPEHFMFNK-----KRNDETKRYSNELLQAWKHQVLKQS--------TT 97
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-VVSIPGIIESLISILLGLCVS 189
L L +SS +G+ G V+ ++ F ++ + V P I ++LI+ G+ +
Sbjct: 98 GLVVLSIISSTAPFIGLFGTVVEILEAFNNLGALGQASFGVIAPIISKALIATAAGILAA 157
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
IP+ Y ++ ++ + S+
Sbjct: 158 IPAYSFYLILKRKVYDLSVYVQMQVDILSS 187
>gi|224025693|ref|ZP_03644059.1| hypothetical protein BACCOPRO_02433 [Bacteroides coprophilus DSM
18228]
gi|224018929|gb|EEF76927.1| hypothetical protein BACCOPRO_02433 [Bacteroides coprophilus DSM
18228]
Length = 262
Score = 82.2 bits (202), Expect = 5e-14, Method: Composition-based stats.
Identities = 32/201 (15%), Positives = 76/201 (37%), Gaps = 18/201 (8%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITL----RRQFREFEQLFWSGQSLETVCKSLKNHHNIG 83
++L+ I +L + I++ + ++ + E G K++ +
Sbjct: 68 MSLVAIALVLGLAFCIERIIYLSLAEVDVKKLMAKLEAALEKGDV--EGAKTICRNTRGP 125
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
+A+I + + D ++R + + + + S++ +
Sbjct: 126 VASICYQGLMRIDEGL-----------DVVERSVVSYGGVQAGYLEKGCSWITLFIAMAP 174
Query: 144 LVGILGAVLGMMGFFQSIAGYYS-NNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIED 202
+G LG V+GM+ F I + V G+ +LI+ + GL V++ + YN +
Sbjct: 175 SLGFLGTVIGMVMAFDDIQQAGDISPTVVAGGMKVALITTIFGLIVALILQVFYNYILSK 234
Query: 203 SKKFAMQMEGFANEFSAILSR 223
+ QME + ++ +
Sbjct: 235 IEAITSQMEDSSITLLDMIMK 255
>gi|317178568|dbj|BAJ56356.1| biopolymer transport protein [Helicobacter pylori F30]
gi|317182383|dbj|BAJ60167.1| biopolymer transport protein [Helicobacter pylori F57]
Length = 189
Score = 82.2 bits (202), Expect = 5e-14, Method: Composition-based stats.
Identities = 32/210 (15%), Positives = 80/210 (38%), Gaps = 28/210 (13%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFI-TLRRQFREFEQLFWSGQSLE 70
SI F + G ++ + ++ +++ + + KS+ L+R+ +
Sbjct: 4 SIVYFFNKSGFVTTLVLVWISLYLVMTLWIFLYKSIVLKIELKREM-------------Q 50
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
++ L + +F K++ + S +Q +++ + T
Sbjct: 51 SLSNILNGVQDAPEHFMFNK-----KRNDETKRYSNELLQAWKHQVLKQS--------TT 97
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-VVSIPGIIESLISILLGLCVS 189
L L +SS +G+ G V+ ++ F ++ + V P I ++LI+ G+ +
Sbjct: 98 GLVVLSIISSTAPFIGLFGTVVEILEAFNNLGALGQASFGVIAPIISKALIATAAGILAA 157
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
IP+ Y ++ ++ + S+
Sbjct: 158 IPAYSFYLILKRKVYDLSVYVQMQVDILSS 187
>gi|254785923|ref|YP_003073352.1| transporter MotA/TolQ/ExbB proton channel family [Teredinibacter
turnerae T7901]
gi|237684229|gb|ACR11493.1| transporter, MotA/TolQ/ExbB proton channel family [Teredinibacter
turnerae T7901]
Length = 272
Score = 82.2 bits (202), Expect = 5e-14, Method: Composition-based stats.
Identities = 31/195 (15%), Positives = 74/195 (37%), Gaps = 17/195 (8%)
Query: 40 SVIIQKSVNFITLRRQF-REFEQL--FWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWK 96
++ +++ + +R+ + FE ++ + + I + K
Sbjct: 31 AITVERWLFLAYEKRRNIKAFEDFIPLLRTTDMDK-MQMYTRESTAPVVRIIGCGLDMMK 89
Query: 97 KSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMG 156
S + ++ M+ + L + + +L +++ L+G+LG ++G++G
Sbjct: 90 VSKQRAD---------VENAMNEGMLETLPRLEARTGYLAVLANVATLLGLLGTIIGLIG 140
Query: 157 FFQSIAGY--YSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFA 214
F ++A + + I ++ + GL +IP + +KK +E A
Sbjct: 141 AFTAVANADPAEKSTLLSSSISVAMNTTAFGLIAAIPLLVLNAVIQNKTKKIVTSIEMSA 200
Query: 215 NEFSAI--LSRQTEG 227
+F I L R E
Sbjct: 201 VKFLNIMTLHRFIEA 215
>gi|327541185|gb|EGF27729.1| tolQ-type transport protein [Rhodopirellula baltica WH47]
Length = 305
Score = 82.2 bits (202), Expect = 5e-14, Method: Composition-based stats.
Identities = 38/207 (18%), Positives = 80/207 (38%), Gaps = 13/207 (6%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
I + +L + G + + + S+L ++ ++++++ T + R +
Sbjct: 65 IDLLSLIARGGRF----MIPIGLMSMLVVTLSVERTLSLRTEKILPRSLVNQ------IS 114
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
+ + + I + S + I+R A+ RE +
Sbjct: 115 DLAATHETFPPSTAQEICVENPSPAARVISAMLMRTGQPLGDIERTASDALQREADRYAG 174
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQS---IAGYYSNNVVSIPGIIESLISILLGLC 187
+ +L ++A L+G+LG V GM+ F + S + GI +L++ L GL
Sbjct: 175 PVRWLTLAAAATPLMGLLGTVWGMIVAFHESSTLTADRSRSEQLSEGIYTALVTTLAGLA 234
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFA 214
V+IP++I K ++E A
Sbjct: 235 VAIPAAILAQYLENRIAKLFHRIEEMA 261
>gi|294101348|ref|YP_003553206.1| MotA/TolQ/ExbB proton channel [Aminobacterium colombiense DSM
12261]
gi|293616328|gb|ADE56482.1| MotA/TolQ/ExbB proton channel [Aminobacterium colombiense DSM
12261]
Length = 209
Score = 82.2 bits (202), Expect = 5e-14, Method: Composition-based stats.
Identities = 37/182 (20%), Positives = 85/182 (46%), Gaps = 14/182 (7%)
Query: 27 IITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG--QSLETVCKSLKNHHNIGL 84
I+ ++F+ SI++ V I++ + F + E ++ + + L
Sbjct: 10 IMWVIFVLSIIALGVFIERVLFFRRSSTDPEKLELALSEALYENDAEKATQIAKSGDSSL 69
Query: 85 AAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLL 144
+F++A++ W+ + +++ I REL + L+ LG++S L
Sbjct: 70 HRLFIAAVAHWQVDT-----------EAFKLLLEQQIRRELFRWIKGLTLLGTISRVAPL 118
Query: 145 VGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCVSIPSSIAYNKFIEDS 203
+G+LG VLGM+ F+ + + ++++ GI ++L++ + GL +++P+ +AY
Sbjct: 119 LGLLGTVLGMVEIFRGLPQASQSPMIALSGGIWQALLTTVAGLSIAVPTVLAYTYLNAKI 178
Query: 204 KK 205
Sbjct: 179 DD 180
>gi|254779681|ref|YP_003057787.1| Biopolymer transport ExbB protein; putative membrane protein
[Helicobacter pylori B38]
gi|254001593|emb|CAX29658.1| Biopolymer transport ExbB protein; putative membrane protein
[Helicobacter pylori B38]
Length = 189
Score = 82.2 bits (202), Expect = 5e-14, Method: Composition-based stats.
Identities = 33/210 (15%), Positives = 80/210 (38%), Gaps = 28/210 (13%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFI-TLRRQFREFEQLFWSGQSLE 70
SI F + G ++ + ++ +++ V + KS+ L+R+ +
Sbjct: 4 SIVYFFNKSGFVTTLVLVWISLYLVMTLWVFLYKSIVLKIELKREM-------------Q 50
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
++ L + +F K++ + S +Q +++ + T
Sbjct: 51 SLSNILNGAQDAPEHFMFNK-----KRNDETKRYSNELLQAWKHQVLKQS--------TT 97
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-VVSIPGIIESLISILLGLCVS 189
L L +SS +G+ G V+ ++ F ++ + V P I ++LI+ G+ +
Sbjct: 98 GLVVLSIISSTAPFIGLFGTVVEILKAFNNLGALGQASFGVIAPIISKALIATAAGILAA 157
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
IP+ Y ++ ++ + S+
Sbjct: 158 IPAYSFYLILKRKVYDLSVYVQMQVDILSS 187
>gi|183396676|dbj|BAG28275.1| MotA/TolQ/Exb proton channel [Desulfotignum balticum]
Length = 180
Score = 82.2 bits (202), Expect = 5e-14, Method: Composition-based stats.
Identities = 33/188 (17%), Positives = 69/188 (36%), Gaps = 20/188 (10%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITL--RRQFREFEQLFWSGQSLETVCKSLKNHHNIGLA 85
+ + S++ W +I + TL + R L + + + + +
Sbjct: 1 MVPILAVSLVMWVLIFNRVWFMRTLYVKNISRT------RAGELVRLNQRPADRYKGANS 54
Query: 86 AIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLV 145
+ + E+ + + I +D + + L+ + +S+ L+
Sbjct: 55 LL----VREFLARRTRDSDLDGYI-------LDETVMGICTSLDRYLAAIRVLSAVAPLL 103
Query: 146 GILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSK 204
G+LG V+GMM F+ I + + N GI +LI+ GL V+IP S+
Sbjct: 104 GLLGTVVGMMHTFEVITVFGTGNARAMAGGISVALITTQTGLMVAIPGLYMAGWLTRRSR 163
Query: 205 KFAMQMEG 212
++
Sbjct: 164 NLKNRISA 171
>gi|317178149|dbj|BAJ55938.1| biopolymer transport protein [Helicobacter pylori F16]
Length = 152
Score = 82.2 bits (202), Expect = 5e-14, Method: Composition-based stats.
Identities = 19/89 (21%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI-AGYYSNNVVSIPGIIESLISILLGL 186
+ ++L+ + ++ S +G+LG V+G+M F + + + + + +L + +GL
Sbjct: 49 LHKRLTLVATIGSNAPYIGLLGTVMGIMLTFMDLGSASGIDTKAIMTNLALALKATGMGL 108
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFAN 215
V+IP+ + YN + S+ + + F +
Sbjct: 109 LVAIPAIVIYNLLVRKSEILVTKWDIFHH 137
>gi|317012907|gb|ADU83515.1| biopolymer transport protein [Helicobacter pylori Lithuania75]
Length = 189
Score = 82.2 bits (202), Expect = 6e-14, Method: Composition-based stats.
Identities = 34/210 (16%), Positives = 80/210 (38%), Gaps = 28/210 (13%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFI-TLRRQFREFEQLFWSGQSLE 70
SI F + G ++ + ++ +++ V + KS+ LRR+ +
Sbjct: 4 SIVYFFNKSGFVTTLVLVWISLYLVMTLWVFLYKSIVLKIELRREM-------------Q 50
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
++ L + +F K++ + S +Q +++ + T
Sbjct: 51 SLSNILNGVQDAPEHFMFNK-----KRNDETKRYSNELLQAWKHQVLKQS--------TT 97
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-VVSIPGIIESLISILLGLCVS 189
L L +SS +G+ G V+ ++ F ++ + V P I ++LI+ G+ +
Sbjct: 98 GLVVLSIISSTAPFIGLFGTVVEILEAFNNLGALGQASFGVIAPIISKALIATAAGILAA 157
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
IP+ Y ++ ++ + S+
Sbjct: 158 IPAYSFYLILKRKVYDLSVYVQMQVDILSS 187
>gi|154491790|ref|ZP_02031416.1| hypothetical protein PARMER_01407 [Parabacteroides merdae ATCC
43184]
gi|154088031|gb|EDN87076.1| hypothetical protein PARMER_01407 [Parabacteroides merdae ATCC
43184]
Length = 245
Score = 82.2 bits (202), Expect = 6e-14, Method: Composition-based stats.
Identities = 28/198 (14%), Positives = 70/198 (35%), Gaps = 20/198 (10%)
Query: 33 IFSILSWSVII------QKSVNFITLRRQFREFEQLFWSGQSLE--TVCKSLKNHHNIGL 84
S+++ ++I ++ + + + K++ +
Sbjct: 50 FMSLVAIALIFGLAFCLERIIYLNLAETNSSKLLKGIEDALDKGDVEGAKAIARDTRGPI 109
Query: 85 AAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLL 144
A+I + + D +++ + + + + +S++ +
Sbjct: 110 ASIAYQGLMRIDQG-----------IDVVEKSIVSYGGVQGGLLEKNMSWITLFIAMAPS 158
Query: 145 VGILGAVLGMMGFFQSIAGYYS-NNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDS 203
+G LG V+GM+ F I + V G+ +LI+ + GL V++ I YN +
Sbjct: 159 LGFLGTVVGMIMAFDKIEQVGDISPTVVAGGMKVALITTVGGLIVALILQIFYNYLLSKL 218
Query: 204 KKFAMQMEGFANEFSAIL 221
+ QME + ++
Sbjct: 219 EAILNQMEDASITLLDLV 236
>gi|308274267|emb|CBX30866.1| Biopolymer transport protein exbB [uncultured Desulfobacterium sp.]
Length = 141
Score = 82.2 bits (202), Expect = 6e-14, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLG 185
E+T++L F+ ++ S +G+LG VLG+M F +I + + G+ +L S +G
Sbjct: 51 ELTKRLHFIATVGSNAPYLGLLGTVLGIMLTFSNIGKQGLADTGQIMTGLALALKSTAVG 110
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEG 212
L V+IP+ + YN + K+ ++ E
Sbjct: 111 LVVAIPAMVLYNFLLRAVKERMLKWEA 137
>gi|212635977|ref|YP_002312502.1| MotA/TolQ/ExbB proton channel [Shewanella piezotolerans WP3]
gi|212557461|gb|ACJ29915.1| MotA/TolQ/ExbB proton channel [Shewanella piezotolerans WP3]
Length = 451
Score = 82.2 bits (202), Expect = 6e-14, Method: Composition-based stats.
Identities = 26/110 (23%), Positives = 56/110 (50%), Gaps = 1/110 (0%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-V 169
+ ++ +D AI +E + ++S + +++ ++G+LG V GM+ FQSI + + +
Sbjct: 334 ETLELKLDEAILKETPALETRISIIKVLAAIAPMMGLLGTVTGMIATFQSIQLFGTGDPK 393
Query: 170 VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
+ GI +L++ + GL ++P + + I SK +E + A
Sbjct: 394 LMAGGISMALMTTVQGLVAALPLMLMHAVVIARSKSIVQVLEEQSAGIVA 443
>gi|261839861|gb|ACX99626.1| transport protein [Helicobacter pylori 52]
Length = 189
Score = 81.8 bits (201), Expect = 6e-14, Method: Composition-based stats.
Identities = 33/210 (15%), Positives = 80/210 (38%), Gaps = 28/210 (13%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFI-TLRRQFREFEQLFWSGQSLE 70
SI F + G ++ + ++ +++ V + KS+ L+R+ +
Sbjct: 4 SIVYFFNKSGFVTTLVLVWISLYLVMTLWVFLYKSIVLKIELKREM-------------Q 50
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
++ L + +F K++ + S +Q +++ + T
Sbjct: 51 SLSNILNGAQDAPEHFMFNK-----KRNDETKRYSNELLQAWKHQILKQS--------TT 97
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-VVSIPGIIESLISILLGLCVS 189
L L +SS +G+ G V+ ++ F ++ + V P I ++LI+ G+ +
Sbjct: 98 GLVVLSIISSTAPFIGLFGTVVEILEAFNNLGALGQASFGVIAPIISKALIATAAGILAA 157
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
IP+ Y ++ ++ + S+
Sbjct: 158 IPAYSFYLILKRKVYDLSVYVQMQVDILSS 187
>gi|198276972|ref|ZP_03209503.1| hypothetical protein BACPLE_03178 [Bacteroides plebeius DSM 17135]
gi|198270497|gb|EDY94767.1| hypothetical protein BACPLE_03178 [Bacteroides plebeius DSM 17135]
Length = 266
Score = 81.8 bits (201), Expect = 6e-14, Method: Composition-based stats.
Identities = 32/201 (15%), Positives = 76/201 (37%), Gaps = 18/201 (8%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITL----RRQFREFEQLFWSGQSLETVCKSLKNHHNIG 83
++L+ I +L + I++ + ++ + E G K++ +
Sbjct: 72 MSLVAIALVLGLAFCIERIIYLSLAEVDVKKLMAKIEAALEKGDV--EGAKTICRNTRGP 129
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
+A+I + + D ++R + + + + S++ +
Sbjct: 130 VASICYQGLMRIDEGL-----------DVVERSVVSYGGVQAGYLEKGCSWITLFIAMAP 178
Query: 144 LVGILGAVLGMMGFFQSIAGYYS-NNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIED 202
+G LG V+GM+ F I + V G+ +LI+ + GL V++ + YN +
Sbjct: 179 SLGFLGTVIGMVMAFDQIQQAGDISPTVVAGGMKVALITTIFGLIVALILQVFYNYILSK 238
Query: 203 SKKFAMQMEGFANEFSAILSR 223
+ QME + ++ +
Sbjct: 239 IEAITSQMEDSSITLLDMIMK 259
>gi|157962472|ref|YP_001502506.1| MotA/TolQ/ExbB proton channel [Shewanella pealeana ATCC 700345]
gi|157847472|gb|ABV87971.1| MotA/TolQ/ExbB proton channel [Shewanella pealeana ATCC 700345]
Length = 451
Score = 81.8 bits (201), Expect = 6e-14, Method: Composition-based stats.
Identities = 39/204 (19%), Positives = 85/204 (41%), Gaps = 29/204 (14%)
Query: 17 FMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSL 76
G I+ LL + +++S I++ V + + + K+L
Sbjct: 268 IEAGGTIGYIIMALLALGALIS----IERLVTLGVVGAKVKAQR-------------KNL 310
Query: 77 KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLG 136
N N L + + ++ + D + ++ +D AI +E + ++S +
Sbjct: 311 DNPGNNALGRVLKA----YQDNKDVDV-------ETLELKLDEAILKETPALETRISIIK 359
Query: 137 SMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-VVSIPGIIESLISILLGLCVSIPSSIA 195
+++ ++G+LG V GM+ FQSI + + + + GI +L++ + GL ++P +
Sbjct: 360 VLAAIAPMMGLLGTVTGMIATFQSIQLFGTGDPKLMAGGISMALMTTVQGLVAALPLMLM 419
Query: 196 YNKFIEDSKKFAMQMEGFANEFSA 219
+ I SK +E + A
Sbjct: 420 HAVVIARSKSIVQVLEEQSAGIVA 443
>gi|320104850|ref|YP_004180441.1| MotA/TolQ/ExbB proton channel [Isosphaera pallida ATCC 43644]
gi|319752132|gb|ADV63892.1| MotA/TolQ/ExbB proton channel [Isosphaera pallida ATCC 43644]
Length = 346
Score = 81.8 bits (201), Expect = 6e-14, Method: Composition-based stats.
Identities = 36/210 (17%), Positives = 78/210 (37%), Gaps = 27/210 (12%)
Query: 16 LFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFR------EFEQLFWSGQSL 69
+ G I+ L S+ ++ + LRR+ + ++
Sbjct: 102 MIEASGPIGWLILFL-------SFYLVALVIWMALKLRREVAIPSGLVRELEELLDQKAY 154
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+ + + LA + + +K A + R M+ A E
Sbjct: 155 SDAFQRISADDSY-LARCLAAGL---RKLPSGPAAA--------RRAMETANEDVAMEFE 202
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVS--IPGIIESLISILLGLC 187
++++L ++ + G ++G++G V GM+ F+ IA + S GI +L + L G+
Sbjct: 203 HRITYLATVGTLGPMIGLVGTVYGMIISFRVIATAGAAPQASDLAMGISTALFATLEGVT 262
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEF 217
+SIP+ + F + ++ +E
Sbjct: 263 LSIPAIYFHALFRNKIARLSLDVETTGEHL 292
>gi|188528215|ref|YP_001910902.1| biopolymer transport protein [Helicobacter pylori Shi470]
gi|188144455|gb|ACD48872.1| biopolymer transport protein [Helicobacter pylori Shi470]
Length = 150
Score = 81.8 bits (201), Expect = 6e-14, Method: Composition-based stats.
Identities = 20/89 (22%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI-AGYYSNNVVSIPGIIESLISILLGL 186
+ ++L+ + ++ S +G+LG V+G+M F + A + + + +L + +GL
Sbjct: 49 LHKRLTLVATIGSNAPYIGLLGTVMGIMLTFMDLGAASGIDTKAIMTNLALALKATGMGL 108
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFAN 215
V+IP+ + YN + S+ + + F +
Sbjct: 109 LVAIPAIVIYNFLVRKSEILVTKWDIFHH 137
>gi|29347465|ref|NP_810968.1| putative biopolymer transport protein [Bacteroides thetaiotaomicron
VPI-5482]
gi|253570680|ref|ZP_04848088.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
gi|29339365|gb|AAO77162.1| putative biopolymer transport protein [Bacteroides thetaiotaomicron
VPI-5482]
gi|251839629|gb|EES67712.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
Length = 267
Score = 81.8 bits (201), Expect = 6e-14, Method: Composition-based stats.
Identities = 30/199 (15%), Positives = 76/199 (38%), Gaps = 18/199 (9%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE----TVCKSLKNHHNIG 83
++L+ I ++ + I++ + ++F + LE K + +
Sbjct: 73 MSLVAIALVIGLAFCIERIIYLSLAEINTKKFMASIEAA--LEKGDVEAAKDIARNTRGP 130
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
+A+I+ + + D +++ + + + + S++ +
Sbjct: 131 VASIYYQGLMRIDQG-----------IDVVEKSVVSYGGVQAGYLEKGCSWITLFIAMAP 179
Query: 144 LVGILGAVLGMMGFFQSIAGYYS-NNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIED 202
+G LG V+GM+ F I + V G+ +LI+ + GL V++ + YN +
Sbjct: 180 SLGFLGTVIGMVQAFDKIQQVGDISPTVVAGGMKVALITTIFGLIVALILQVFYNYVLAK 239
Query: 203 SKKFAMQMEGFANEFSAIL 221
+ +ME + ++
Sbjct: 240 IEALTSEMEDSSISLLDMV 258
>gi|15645744|ref|NP_207921.1| biopolymer transport protein (exbB) [Helicobacter pylori 26695]
gi|3913601|sp|O25755|EXBL1_HELPY RecName: Full=Putative biopolymer transport protein exbB-like 1
gi|2314281|gb|AAD08172.1| biopolymer transport protein (exbB) [Helicobacter pylori 26695]
Length = 189
Score = 81.8 bits (201), Expect = 6e-14, Method: Composition-based stats.
Identities = 33/210 (15%), Positives = 80/210 (38%), Gaps = 28/210 (13%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFI-TLRRQFREFEQLFWSGQSLE 70
SI F + G ++ + ++ +++ V + KS+ L+R+ +
Sbjct: 4 SIVYFFNKSGFVTTLVLVWISLYLVMTLWVFLYKSIALKIELKREM-------------Q 50
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
++ L + +F K++ + S +Q +++ + T
Sbjct: 51 SLSNILNGAQDAPEHFMFNK-----KRNDETKRYSNELLQAWKHQVLKQS--------TT 97
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-VVSIPGIIESLISILLGLCVS 189
L L +SS +G+ G V+ ++ F ++ + V P I ++LI+ G+ +
Sbjct: 98 GLVVLSIISSTAPFIGLFGTVVEILEAFNNLGTLGQASFGVIAPIISKALIATAAGILAA 157
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
IP+ Y ++ ++ + S+
Sbjct: 158 IPAYSFYLILKRKVYDLSVYVQMQVDILSS 187
>gi|295084868|emb|CBK66391.1| Biopolymer transport proteins [Bacteroides xylanisolvens XB1A]
Length = 265
Score = 81.8 bits (201), Expect = 7e-14, Method: Composition-based stats.
Identities = 30/199 (15%), Positives = 76/199 (38%), Gaps = 18/199 (9%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE----TVCKSLKNHHNIG 83
++L+ I ++ + I++ + ++F + LE K + +
Sbjct: 71 MSLVAIALVIGLAFCIERIIYLSLAEINTKKFMASIEAA--LEKGDVEAAKDIARNTRGP 128
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
+A+I+ + + D +++ + + + + S++ +
Sbjct: 129 VASIYYQGLMRIDQG-----------IDVVEKSVVSYGGVQAGYLEKGCSWITLFIAMAP 177
Query: 144 LVGILGAVLGMMGFFQSIAGYYS-NNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIED 202
+G LG V+GM+ F I + V G+ +LI+ + GL V++ + YN +
Sbjct: 178 SLGFLGTVIGMVQAFDKIQQVGDISPTVVAGGMKVALITTIFGLIVALILQVFYNYVLAK 237
Query: 203 SKKFAMQMEGFANEFSAIL 221
+ +ME + ++
Sbjct: 238 IEALTSEMEDSSISLLDMV 256
>gi|237713980|ref|ZP_04544461.1| conserved hypothetical protein [Bacteroides sp. D1]
gi|262407032|ref|ZP_06083581.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|294646602|ref|ZP_06724234.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Bacteroides ovatus SD CC 2a]
gi|294809766|ref|ZP_06768450.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Bacteroides xylanisolvens SD CC 1b]
gi|298479708|ref|ZP_06997908.1| MotA/TolQ/ExbB proton channel family protein [Bacteroides sp. D22]
gi|229445804|gb|EEO51595.1| conserved hypothetical protein [Bacteroides sp. D1]
gi|262355735|gb|EEZ04826.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|292638044|gb|EFF56430.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Bacteroides ovatus SD CC 2a]
gi|294443006|gb|EFG11789.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Bacteroides xylanisolvens SD CC 1b]
gi|298274098|gb|EFI15659.1| MotA/TolQ/ExbB proton channel family protein [Bacteroides sp. D22]
Length = 266
Score = 81.8 bits (201), Expect = 7e-14, Method: Composition-based stats.
Identities = 30/199 (15%), Positives = 76/199 (38%), Gaps = 18/199 (9%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE----TVCKSLKNHHNIG 83
++L+ I ++ + I++ + ++F + LE K + +
Sbjct: 72 MSLVAIALVIGLAFCIERIIYLSLAEINTKKFMASIEAA--LEKGDVEAAKDIARNTRGP 129
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
+A+I+ + + D +++ + + + + S++ +
Sbjct: 130 VASIYYQGLMRIDQG-----------IDVVEKSVVSYGGVQAGYLEKGCSWITLFIAMAP 178
Query: 144 LVGILGAVLGMMGFFQSIAGYYS-NNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIED 202
+G LG V+GM+ F I + V G+ +LI+ + GL V++ + YN +
Sbjct: 179 SLGFLGTVIGMVQAFDKIQQVGDISPTVVAGGMKVALITTIFGLIVALILQVFYNYVLAK 238
Query: 203 SKKFAMQMEGFANEFSAIL 221
+ +ME + ++
Sbjct: 239 IEALTSEMEDSSISLLDMV 257
>gi|217032683|ref|ZP_03438169.1| hypothetical protein HPB128_202g17 [Helicobacter pylori B128]
gi|217034729|ref|ZP_03440130.1| hypothetical protein HP9810_3g14 [Helicobacter pylori 98-10]
gi|298735867|ref|YP_003728392.1| biopolymer transport protein ExbB [Helicobacter pylori B8]
gi|216942812|gb|EEC22311.1| hypothetical protein HP9810_3g14 [Helicobacter pylori 98-10]
gi|216945613|gb|EEC24264.1| hypothetical protein HPB128_202g17 [Helicobacter pylori B128]
gi|261838458|gb|ACX98224.1| biopolymer transport accessory protein [Helicobacter pylori 51]
gi|297380308|gb|ADI35195.1| Biopolymer transport protein exbB [Helicobacter pylori v225d]
gi|298355056|emb|CBI65928.1| biopolymer transport protein exbB [Helicobacter pylori B8]
gi|308063915|gb|ADO05802.1| biopolymer transport protein [Helicobacter pylori Sat464]
Length = 189
Score = 81.8 bits (201), Expect = 7e-14, Method: Composition-based stats.
Identities = 33/210 (15%), Positives = 80/210 (38%), Gaps = 28/210 (13%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFI-TLRRQFREFEQLFWSGQSLE 70
SI F + G ++ + ++ +++ V + KS+ L+R+ +
Sbjct: 4 SIVYFFNKSGFVTTLVLVWISLYLVMTLWVFLYKSIVLKIELKREM-------------Q 50
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
++ L + +F K++ + S +Q +++ + T
Sbjct: 51 SLSNILNGVQDAPEHFMFNK-----KRNDETKRYSNELLQAWKHQVLKQS--------TT 97
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-VVSIPGIIESLISILLGLCVS 189
L L +SS +G+ G V+ ++ F ++ + V P I ++LI+ G+ +
Sbjct: 98 GLVVLSIISSTAPFIGLFGTVVEILEAFNNLGALGQASFGVIAPIISKALIATAAGILAA 157
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
IP+ Y ++ ++ + S+
Sbjct: 158 IPAYSFYLILKRKVYDLSVYVQMQVDILSS 187
>gi|304312643|ref|YP_003812241.1| Biopolymer transport proteins-like [gamma proteobacterium HdN1]
gi|301798376|emb|CBL46600.1| Biopolymer transport proteins-like [gamma proteobacterium HdN1]
Length = 232
Score = 81.8 bits (201), Expect = 7e-14, Method: Composition-based stats.
Identities = 30/206 (14%), Positives = 84/206 (40%), Gaps = 17/206 (8%)
Query: 29 TLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFW---SGQSLETVCKSLKNHHNIGLA 85
L +F I+ +++I++ + ++ + + ++ + + + + K + +A
Sbjct: 33 VTLLVF-IVGIAIVIERFIYLNVVQTRNQSMWKILFPLMTQGKFKAAHEEAKQ-SSSAIA 90
Query: 86 AIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLV 145
I + S + + I+ M+ + + + + ++ + ++ L+
Sbjct: 91 RILTYGLQRSAVSNNH---------EEIEMAMEEGLMETIPSLERRTHYVATFANIATLL 141
Query: 146 GILGAVLGMMGFFQSIAGY--YSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDS 203
G+LG V+GM+ F ++A + I ++ + LGL +IP + ++ +
Sbjct: 142 GLLGTVMGMIDAFTAVATADPARKGELLSASISVAMNNTALGLIAAIPLLLCFSYLQSKT 201
Query: 204 KKFAMQMEGFANEFSAILSRQTEGNI 229
+ ME + +F + RQ +
Sbjct: 202 TQLIDSMEMASVKFLNVF-RQAKAQQ 226
>gi|109947171|ref|YP_664399.1| biopolymer transport protein [Helicobacter acinonychis str. Sheeba]
gi|109714392|emb|CAJ99400.1| biopolymer transport protein [Helicobacter acinonychis str. Sheeba]
Length = 196
Score = 81.4 bits (200), Expect = 8e-14, Method: Composition-based stats.
Identities = 32/209 (15%), Positives = 79/209 (37%), Gaps = 28/209 (13%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFI-TLRRQFREFEQLFWSGQSLET 71
I F + G ++ + + +++ + + KS+ L+R+ QSL
Sbjct: 5 IVDFFHKSGFVTALVLIWVSFYLVVTLWIFLYKSIVLKIELKREM----------QSLSN 54
Query: 72 VCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEK 131
+ +++ + + K + G + ++ + L++ T
Sbjct: 55 ILNGVQDAPEHSM----------FNKRKNHGPQRHS------KELLQAWKHQILKQSTTG 98
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-VVSIPGIIESLISILLGLCVSI 190
L L +SS +G+ G V+ ++ F S+ + V P I ++L++ G+ +I
Sbjct: 99 LVVLSIISSTAPFIGLFGTVVEILEAFNSLGVLGQASFGVIAPIISKALVATAGGILAAI 158
Query: 191 PSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
P+ Y ++ ++ + S+
Sbjct: 159 PAYSFYLILKRKIYDLSVYVQMQVDILSS 187
>gi|154175493|ref|YP_001408807.1| transcription elongation factor GreA [Campylobacter curvus 525.92]
gi|112803733|gb|EAU01077.1| transcription elongation factor GreA (Transcript cleavage
factorgreA) [Campylobacter curvus 525.92]
Length = 135
Score = 81.4 bits (200), Expect = 8e-14, Method: Composition-based stats.
Identities = 22/105 (20%), Positives = 51/105 (48%), Gaps = 1/105 (0%)
Query: 117 MDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGI 175
++V I+ + T L++L ++S +G+ G V+ ++ F + ++++ V P I
Sbjct: 25 LNVCISIAEKNATSGLTWLSVIASTSPFIGLFGTVVSILETFSQLGNSANSSLGVIAPAI 84
Query: 176 IESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAI 220
E+L++ G+ V+IP+ + + +E A+ A+
Sbjct: 85 SEALVATGAGIFVAIPAYTFNLLIKRKAYELMSVIERQADVLVAL 129
>gi|57237116|ref|YP_178128.1| MotA/TolQ/ExbB proton channel family protein [Campylobacter jejuni
RM1221]
gi|57165920|gb|AAW34699.1| MotA/TolQ/ExbB proton channel family protein [Campylobacter jejuni
RM1221]
gi|315057549|gb|ADT71878.1| MotA/TolQ/ExbB proton channel family protein [Campylobacter jejuni
subsp. jejuni S3]
Length = 184
Score = 81.4 bits (200), Expect = 8e-14, Method: Composition-based stats.
Identities = 33/200 (16%), Positives = 75/200 (37%), Gaps = 30/200 (15%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
IF F + ++ L ++ IL++S++ + T R + +E SLET+
Sbjct: 6 IFHFFNSSSIITYIVLLWLSLYFILAFSILFARLTYLATWRNKEKE---------SLETL 56
Query: 73 CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKL 132
L +I D +++ + L
Sbjct: 57 L--LGEKDLSRTDSILRK------------------CNDTTSNHLEIYKNLASRRASAGL 96
Query: 133 SFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPS 192
++L ++S +G+ G V+ ++ F + S +++ P I E+L++ G+ V+IP+
Sbjct: 97 TWLSIIASTSPFIGLFGTVISILETFGGLETQNSLSLI-APKISEALVATGCGILVAIPA 155
Query: 193 SIAYNKFIEDSKKFAMQMEG 212
+ + + ++
Sbjct: 156 YTFHLIIKRKAFELLSIIDS 175
>gi|157736642|ref|YP_001489325.1| biopolymer transport protein ExbB [Arcobacter butzleri RM4018]
gi|315635806|ref|ZP_07891068.1| biopolymer transport protein ExbB [Arcobacter butzleri JV22]
gi|157698496|gb|ABV66656.1| biopolymer transport protein ExbB [Arcobacter butzleri RM4018]
gi|315479785|gb|EFU70456.1| biopolymer transport protein ExbB [Arcobacter butzleri JV22]
Length = 157
Score = 81.4 bits (200), Expect = 8e-14, Method: Composition-based stats.
Identities = 29/104 (27%), Positives = 54/104 (51%), Gaps = 3/104 (2%)
Query: 109 IQDRIDRM--MDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYS 166
I++ +DR ++ I E +++ L+ + +++ L+G+LG V+G+ F I
Sbjct: 45 IKENLDRTKPLEAQIEYETKKLESGLTVIKNIAIISPLLGLLGTVVGIYILFDQITLKGL 104
Query: 167 NN-VVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQ 209
+ + GI +LI+ + G+ VSIP IAYN FI ++
Sbjct: 105 GDPTIFSGGIAIALITTVAGIIVSIPHQIAYNHFISAIDTIEVK 148
>gi|114799765|ref|YP_761324.1| MotA/TolQ/ExbB proton channel family protein [Hyphomonas neptunium
ATCC 15444]
gi|114739939|gb|ABI78064.1| MotA/TolQ/ExbB proton channel family protein [Hyphomonas neptunium
ATCC 15444]
Length = 464
Score = 81.4 bits (200), Expect = 8e-14, Method: Composition-based stats.
Identities = 43/214 (20%), Positives = 84/214 (39%), Gaps = 28/214 (13%)
Query: 18 MQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLK 77
+Q G V +I +L I IL + + K F SG ++ K+ +
Sbjct: 278 LQQGGQVGAVIAVLAIIGIL---IGLYKMFTL-------------FTSGGAMRGTAKTRQ 321
Query: 78 NHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGS 137
LA +F + E ++ D + ++ +D I RE I +
Sbjct: 322 AGTGNPLARVFE--VYENNRNAD---------VETLELKLDEQILRESPRIERFNDIIKV 370
Query: 138 MSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-VVSIPGIIESLISILLGLCVSIPSSIAY 196
+++ L+G+LG V+GM+ F +I Y + + + GI +L++ + GL +IP + +
Sbjct: 371 LAAVAPLLGLLGTVVGMIITFTAITIYGAGDPKLMAGGISVALMTTVFGLVAAIPLLLIH 430
Query: 197 NKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
++ ++ A A G +
Sbjct: 431 AVVSAMARSNQQLLDEQAAGLVAEKMEAIHGGRA 464
>gi|315587018|gb|ADU41399.1| biopolymer transporter [Helicobacter pylori 35A]
Length = 197
Score = 81.4 bits (200), Expect = 8e-14, Method: Composition-based stats.
Identities = 35/217 (16%), Positives = 85/217 (39%), Gaps = 29/217 (13%)
Query: 5 GLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFI-TLRRQFREFEQLF 63
G+ ++D SI F + G ++ + ++ +++ V + KS+ L+R+
Sbjct: 6 GIIMLD-SIVYFFNKSGFVTTLVLVWISLYLVMTLWVFLYKSIVLKIELKREM------- 57
Query: 64 WSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAR 123
+++ L + +F K++ + S +Q +++ +
Sbjct: 58 ------QSLSNILNGVQDAPEHFMFNK-----KRNDETKRYSNELLQAWKHQVLKQS--- 103
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-VVSIPGIIESLISI 182
T L L +SS +G+ G V+ ++ F ++ + V P I ++LI+
Sbjct: 104 -----TTGLVVLSIISSTAPFIGLFGTVVEILEAFNNLGALGQASFGVIAPIISKALIAT 158
Query: 183 LLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
G+ +IP+ Y ++ ++ + S+
Sbjct: 159 AAGILAAIPAYSFYLILKRKVYDLSVYVQMQVDILSS 195
>gi|301308382|ref|ZP_07214336.1| MotA/TolQ/ExbB proton channel family protein [Bacteroides sp. 20_3]
gi|300833852|gb|EFK64468.1| MotA/TolQ/ExbB proton channel family protein [Bacteroides sp. 20_3]
Length = 244
Score = 81.4 bits (200), Expect = 9e-14, Method: Composition-based stats.
Identities = 27/198 (13%), Positives = 70/198 (35%), Gaps = 20/198 (10%)
Query: 33 IFSILSWSVII------QKSVNFITLRRQFREFEQLFWSGQSLE--TVCKSLKNHHNIGL 84
S+++ ++I ++ + + + K++ +
Sbjct: 49 FMSLVAIALIFGLAFCLERIIYLNLAETNSSKLLKGIEDALDKGDVEGAKAIARDTRGPI 108
Query: 85 AAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLL 144
A+I + + D +++ + + + + +S++ +
Sbjct: 109 ASIAYQGLMRIDQG-----------IDVVEKSIVSYGGVQGGLLEKNMSWITLFIAMAPS 157
Query: 145 VGILGAVLGMMGFFQSIAGYYS-NNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDS 203
+G LG V+GM+ F I + V G+ +LI+ + GL V++ + YN +
Sbjct: 158 LGFLGTVVGMIMAFDKIEQVGDISPTVVAGGMKVALITTVGGLIVALILQVFYNYLLSKL 217
Query: 204 KKFAMQMEGFANEFSAIL 221
+ QME + ++
Sbjct: 218 EAILNQMEDASISLLDLV 235
>gi|268679158|ref|YP_003303589.1| MotA/TolQ/ExbB proton channel [Sulfurospirillum deleyianum DSM
6946]
gi|268617189|gb|ACZ11554.1| MotA/TolQ/ExbB proton channel [Sulfurospirillum deleyianum DSM
6946]
Length = 195
Score = 81.4 bits (200), Expect = 9e-14, Method: Composition-based stats.
Identities = 38/221 (17%), Positives = 79/221 (35%), Gaps = 43/221 (19%)
Query: 11 ISIFALFMQ----MGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG 66
+S L + G I+ L + I+++ ++ + + W
Sbjct: 1 MSFLDLVINFAARSGFVTWFIMIWLSTYFIITFGILFGRHLYLNH------------WLS 48
Query: 67 QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
L ++ M A + S + S G +++ ++V +
Sbjct: 49 V------------EKSSLESMLMGAKNVRDDSILRKCSSVSGTSEKL---LNVCKNVAEK 93
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLG 185
T L L ++S +G+ G V+ ++ F + S ++ V P I E+L++ G
Sbjct: 94 NATSALWMLSIIASTAPFIGLFGTVVSILETFSGLGQSGSASLGVIAPAISEALVATAAG 153
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+ V+IP+ A N F+ A E + R+ +
Sbjct: 154 IFVAIPAYSA-NLFLRRK----------AYEVIVYVQREVD 183
>gi|330996089|ref|ZP_08319982.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Paraprevotella xylaniphila YIT 11841]
gi|329573860|gb|EGG55441.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Paraprevotella xylaniphila YIT 11841]
Length = 445
Score = 81.4 bits (200), Expect = 9e-14, Method: Composition-based stats.
Identities = 37/201 (18%), Positives = 71/201 (35%), Gaps = 16/201 (7%)
Query: 19 QMGLAVKC-----IITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVC 73
Q+ + I+ L++ IL+ + IQ+ R + E VC
Sbjct: 238 QIDWVAQIKAGGFIMYPLYLLGILALVITIQRFFTSTRGRLAPKGLA---------EKVC 288
Query: 74 KSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLS 133
++ A+ S + + + + AR++ ++
Sbjct: 289 ACIEKQDYDAAVALCRKKPSTLGNALGFIVEHRDADWEAVCQTAGDMAARDIRGHLSRIY 348
Query: 134 FLGSMSSAGLLVGILGAVLGMMGFFQSIA--GYYSNNVVSIPGIIESLISILLGLCVSIP 191
L +SS L+G+ G ++GM+ F +A G + I ++LI+ GL V++P
Sbjct: 349 PLSVISSLSPLLGLFGTIVGMIEAFGLVAFFGDEGGASILSDSISKALITTAAGLIVAMP 408
Query: 192 SSIAYNKFIEDSKKFAMQMEG 212
S Y Q+E
Sbjct: 409 SIAVYFILKSRISNLGAQIET 429
>gi|224438005|ref|ZP_03658944.1| biopolymer transport protein [Helicobacter cinaedi CCUG 18818]
gi|313144451|ref|ZP_07806644.1| biopolymer transport protein [Helicobacter cinaedi CCUG 18818]
gi|313129482|gb|EFR47099.1| biopolymer transport protein [Helicobacter cinaedi CCUG 18818]
Length = 142
Score = 81.4 bits (200), Expect = 9e-14, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVS-IPGIIESLISILL 184
E +++ L+ L + S VG+LG V+G+M F + + S + G+ +L + L
Sbjct: 50 EALSKNLTALYIIYSNAPYVGLLGTVVGIMITFYDMGMSGGMDAQSIMVGLSTALKATAL 109
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQM 210
GL V+IP+ I YN F+ +
Sbjct: 110 GLVVAIPTLIVYNCFVRKMDILLNRY 135
>gi|183222365|ref|YP_001840361.1| biopolymer transport ExbB protein [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
gi|189912412|ref|YP_001963967.1| TolQ-like transport protein [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|106879744|emb|CAJ90441.1| biopolymer transport ExbB protein [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
gi|167777088|gb|ABZ95389.1| TolQ-like transport protein [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167780787|gb|ABZ99085.1| Biopolymer transport ExbB protein; putative membrane protein
[Leptospira biflexa serovar Patoc strain 'Patoc 1
(Paris)']
Length = 204
Score = 81.4 bits (200), Expect = 9e-14, Method: Composition-based stats.
Identities = 40/203 (19%), Positives = 83/203 (40%), Gaps = 24/203 (11%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFIT-LRRQFREFEQLFWSGQSLETVCKSLKNHH---- 80
+ + I S+++ +V ++ + + L ++ ++ L V SL+
Sbjct: 11 LVFIAMGIASVIALAVFAERLIYYKKTLGKKNEDY---------LSEVRNSLQEEPEIHW 61
Query: 81 --NIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSM 138
+ G +I + + + + +D +D I E E+ ++L L ++
Sbjct: 62 KTDAGEESI-------YNRFIQFALKQLKLGRKGLDESLDGQILSEKLELEKRLPILNTL 114
Query: 139 SSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYN 197
+ +G+LG VLG++ F + S+ V + I +L++ GL V+IP +A N
Sbjct: 115 GNNAPFIGLLGTVLGVIKAFYGLGTLGSSGAEVVMRSISTALLATAAGLAVAIPVVMANN 174
Query: 198 KFIEDSKKFAMQMEGFANEFSAI 220
F SK +E E +
Sbjct: 175 YFSRKSKVILQNLEILKKELLSY 197
>gi|87307367|ref|ZP_01089512.1| probable tolQ-type transport protein [Blastopirellula marina DSM
3645]
gi|87290107|gb|EAQ81996.1| probable tolQ-type transport protein [Blastopirellula marina DSM
3645]
Length = 289
Score = 81.4 bits (200), Expect = 9e-14, Method: Composition-based stats.
Identities = 36/211 (17%), Positives = 75/211 (35%), Gaps = 27/211 (12%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+ + AL ++ G + + + S+L ++ ++++ R
Sbjct: 59 LHLVALILKGGQM----MIPIGLMSLLVVTLAFERAIALRRGR-------------IIPA 101
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDR-------MMDVAIAR 123
+ + L+ A KK A + R+ R ++ A R
Sbjct: 102 ELVEGLEQMQFAPDGFQPRDAYRLCKKYPSAMANIVESMLARVGRPQAEVVHAVNEASER 161
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAG---YYSNNVVSIPGIIESLI 180
E + + + +L + L+G+LG V G++ F + GI +L+
Sbjct: 162 EADRLYSNVRWLTLAAGVTPLMGLLGTVWGIIWAFYKTTQLEIGGNRANQLAEGIYVALV 221
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
+ L GL V+IP++I F Q++
Sbjct: 222 TTLGGLVVAIPAAILAQYFESRIISLFHQID 252
>gi|189461915|ref|ZP_03010700.1| hypothetical protein BACCOP_02582 [Bacteroides coprocola DSM 17136]
gi|189431309|gb|EDV00294.1| hypothetical protein BACCOP_02582 [Bacteroides coprocola DSM 17136]
Length = 267
Score = 81.4 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 32/201 (15%), Positives = 77/201 (38%), Gaps = 18/201 (8%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITL----RRQFREFEQLFWSGQSLETVCKSLKNHHNIG 83
++L+ I +L + I++ + ++ + E G K++ +
Sbjct: 73 MSLVAIALVLGLAFCIERIIYLSLAEVDVKKLMAKVEAALEKGDV--EGAKTICRNTRGP 130
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
+A+I + + D ++R + + + + S++ +
Sbjct: 131 VASICYQGLMRIDEGV-----------DVVERSVVSYGGVQAGYLEKGCSWITLFIAMAP 179
Query: 144 LVGILGAVLGMMGFFQSIAGYYS-NNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIED 202
+G LG V+GM+ F +I + V G+ +LI+ + GL V++ + YN +
Sbjct: 180 SLGFLGTVIGMVMAFDNIQRAGDISPTVVAGGMKVALITTIFGLIVALILQVFYNYILSK 239
Query: 203 SKKFAMQMEGFANEFSAILSR 223
+ QME + ++ +
Sbjct: 240 IEAITSQMEDSSITLLDMIMK 260
>gi|158521748|ref|YP_001529618.1| MotA/TolQ/ExbB proton channel [Desulfococcus oleovorans Hxd3]
gi|158510574|gb|ABW67541.1| MotA/TolQ/ExbB proton channel [Desulfococcus oleovorans Hxd3]
Length = 201
Score = 81.4 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 32/184 (17%), Positives = 67/184 (36%), Gaps = 16/184 (8%)
Query: 27 IITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAA 86
++ L S + W +I KS+ L +G S + +
Sbjct: 21 VMVPLLAVSFVLWLLIAHKSLVLRRLNA----------TGISRRQAGELITAGRTPPAKC 70
Query: 87 IFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVG 146
++A+ + + + ++D + + + LS + +++ L+G
Sbjct: 71 AGINAVLVRHFLARRTGSAAVD-----GYILDEIVLHLVFSLNRHLSVIAVLAAIAPLLG 125
Query: 147 ILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKK 205
+LG V GM+ F ++ + + N GI E+LI+ GL V+IP +
Sbjct: 126 LLGTVTGMVATFDALTLFGTGNARALAGGISEALITTQAGLLVAIPGFYMSGFLARRTAL 185
Query: 206 FAMQ 209
+
Sbjct: 186 LKQR 189
>gi|118589612|ref|ZP_01547017.1| MotA/TolQ/ExbB proton channel [Stappia aggregata IAM 12614]
gi|118437698|gb|EAV44334.1| MotA/TolQ/ExbB proton channel [Stappia aggregata IAM 12614]
Length = 240
Score = 81.0 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 32/145 (22%), Positives = 60/145 (41%), Gaps = 2/145 (1%)
Query: 77 KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLG 136
+ +AA S +++ +G+ D + ++ + + + L L
Sbjct: 73 RPQEAKAMAASGKSVVADIMLKLVQGSARSDTRTDLLKEDVERICIQRINMLRAYLRPLD 132
Query: 137 SMSSAGLLVGILGAVLGMMGFFQSIAGYYSN--NVVSIPGIIESLISILLGLCVSIPSSI 194
++ L+G+LG VLGM+ FQ++ G + V GI +L++ +GL V+IP S
Sbjct: 133 MIAQTAPLIGLLGTVLGMIEAFQAMQGAGAAVDPSVLAGGIWVALLTTAVGLSVAIPVSA 192
Query: 195 AYNKFIEDSKKFAMQMEGFANEFSA 219
F + +ME F
Sbjct: 193 IVGWFDSRIEAEQSEMEALVTAFFT 217
>gi|91203872|emb|CAJ71525.1| similar to biopolymer transport ExbB peptide [Candidatus Kuenenia
stuttgartiensis]
Length = 201
Score = 81.0 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 35/199 (17%), Positives = 85/199 (42%), Gaps = 16/199 (8%)
Query: 27 IITLLFIFSILSWSVIIQKSVNFIT---LRRQFREFEQLFWSGQSLETVCKSLKNHHNIG 83
I+ L + S+ S ++I+++++N L+ + + + S + + +
Sbjct: 10 IMIPLLVCSVFSLAIIMERAINLRKNKILKPEIIQTIEAIKSPRDIPFAISKCEVIEG-P 68
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
+ + +S S ++ + + R+ + ++L L +++
Sbjct: 69 FSNLLRRILSNNHLSREEKFIDIQAMGRQETRV-----------LEKRLWLLEVITAIAP 117
Query: 144 LVGILGAVLGMMGFFQSIAGYYSNNVVS-IPGIIESLISILLGLCVSIPSSIAYNKFIED 202
L+G+LG VLG+ F I+ + + G+ ++ + + GLC++IPS +AYN F
Sbjct: 118 LLGLLGTVLGLEDIFAIISELGLGHAKAFAGGLAVAIRTTVFGLCIAIPSLVAYNYFDRK 177
Query: 203 SKKFAMQMEGFANEFSAIL 221
+ ++E ++ L
Sbjct: 178 VDGYVREIEEYSLTILNKL 196
>gi|332674212|gb|AEE71029.1| TonB-system energizer ExbB [Helicobacter pylori 83]
Length = 150
Score = 81.0 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 19/89 (21%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI-AGYYSNNVVSIPGIIESLISILLGL 186
+ ++L+ + ++ S +G+LG V+G+M F + + + + + +L + +GL
Sbjct: 49 LHKRLTLVATIGSNAPYIGLLGTVMGIMLTFMDLGSASGIDTKAIMTNLALALKATGMGL 108
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFAN 215
V+IP+ + YN + S+ + + F +
Sbjct: 109 LVAIPAIVIYNLLVRKSEILVTKWDIFHH 137
>gi|269793120|ref|YP_003318024.1| MotA/TolQ/ExbB proton channel [Thermanaerovibrio acidaminovorans
DSM 6589]
gi|269100755|gb|ACZ19742.1| MotA/TolQ/ExbB proton channel [Thermanaerovibrio acidaminovorans
DSM 6589]
Length = 206
Score = 81.0 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 38/205 (18%), Positives = 78/205 (38%), Gaps = 29/205 (14%)
Query: 27 IITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNH------- 79
I ++ + SI + ++ + + R+ L + + L +H
Sbjct: 14 IAWIILLTSIFTMALAMDRLWVLYRCTLVSRQL--------DLNQLEEPLGSHGTGGHAT 65
Query: 80 -HNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSM 138
A + M+ W K + ++AI EL +++ LS +
Sbjct: 66 LPPGPAARVVQGIMAFWDKGSGA-----------MREAAEIAIREELFLLSKGLSTIEWA 114
Query: 139 SSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNK 198
+ ++G+LG VLGM+ F +I +++ GI ++L + + GLC +IP+S
Sbjct: 115 ARIAPMLGLLGTVLGMVDMFGAIGTAGASSGAVALGIRKALYTTVAGLCCAIPASAMLRL 174
Query: 199 FIEDSKKFAMQMEGFANEFSAILSR 223
++ ++ IL R
Sbjct: 175 LDHLIDAEEERLRRISH--HLILHR 197
>gi|210135612|ref|YP_002302051.1| biopolymer transport protein ExbB [Helicobacter pylori P12]
gi|210133580|gb|ACJ08571.1| biopolymer transport protein ExbB [Helicobacter pylori P12]
Length = 150
Score = 81.0 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 19/89 (21%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI-AGYYSNNVVSIPGIIESLISILLGL 186
+ ++L+ + ++ S +G+LG V+G+M F + + + + + +L + +GL
Sbjct: 49 LHKRLTLVATIGSNAPYIGLLGTVMGIMLTFMDLGSASGIDTKAIMTNLALALKATGMGL 108
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFAN 215
V+IP+ + YN + S+ + + F +
Sbjct: 109 LVAIPAIVIYNLLVRKSEILVTKWDIFHH 137
>gi|85860614|ref|YP_462816.1| tolQ protein [Syntrophus aciditrophicus SB]
gi|85723705|gb|ABC78648.1| tolQ protein [Syntrophus aciditrophicus SB]
Length = 144
Score = 81.0 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 3/86 (3%)
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA--GYYSNNVVSIPGIIESLISILLG 185
+T KL + ++ S +G+LG V G+M F S+ G+ + + G+ +L + +G
Sbjct: 52 LTRKLHLIATIGSNAPYIGLLGTVCGIMLTFYSMGRDGFMDTGKIMV-GLALALKATAVG 110
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQME 211
LCV+IPS + YN + K M E
Sbjct: 111 LCVAIPSIVLYNLLLRRVKVLMMNWE 136
>gi|282879507|ref|ZP_06288241.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Prevotella timonensis CRIS 5C-B1]
gi|281306654|gb|EFA98680.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Prevotella timonensis CRIS 5C-B1]
Length = 262
Score = 81.0 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 24/127 (18%), Positives = 51/127 (40%), Gaps = 1/127 (0%)
Query: 101 KGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQS 160
+G + I+R + + + + + S++ + +G LG V+GM+ F
Sbjct: 135 QGLDRIDDSIENIERSVAAYGSVQATNLEKGCSWITLFIAMAPSLGFLGTVIGMIMTFDQ 194
Query: 161 IAGYYS-NNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
I + + G+ +LI+ + G+ V++ + YN + QME A
Sbjct: 195 IQMAGDISPTIVAAGMKVALITTIFGIIVALVLQVFYNYILSKIDHITAQMEESAITLLD 254
Query: 220 ILSRQTE 226
L + +
Sbjct: 255 TLMKHKQ 261
>gi|37520956|ref|NP_924333.1| hypothetical protein glr1387 [Gloeobacter violaceus PCC 7421]
gi|37521971|ref|NP_925348.1| MotA/TolQ/ExbB family proton channel protein [Gloeobacter violaceus
PCC 7421]
gi|35211951|dbj|BAC89328.1| glr1387 [Gloeobacter violaceus PCC 7421]
gi|35212970|dbj|BAC90343.1| MotA/TolQ/ExbB family proton channel protein [Gloeobacter violaceus
PCC 7421]
Length = 211
Score = 81.0 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 44/204 (21%), Positives = 98/204 (48%), Gaps = 18/204 (8%)
Query: 21 GLAVK--CIITLLFIFSILSWSVIIQKSVNFITLRRQFREF-EQLFWSGQ-SLETVCKSL 76
V+ ++ + + SI++ ++II++ + ++ L + + F EQ F + + + + + +
Sbjct: 5 DWFVRGGIVMWPMLLCSIIALAIIIERIIYYVRLLPRQKAFVEQAFATERYQPDQLRRLI 64
Query: 77 KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLG 136
+ +I L IF SA+S R+ R+ ++ A E+ ++ +S L
Sbjct: 65 NENADIPLGRIFGSALS---------VRTDDETAFRL--AIEGAAKTEIPKLKRFVSVLD 113
Query: 137 SMSSAGLLVGILGAVLGMMGFFQSIA---GYYSNNVVSIPGIIESLISILLGLCVSIPSS 193
++ + L+G+LG VLG++ F S+ S + GI E+LI+ G+ V++ +
Sbjct: 114 TIVTLSPLLGLLGTVLGLINSFASLGLGTEASSKGLEVAGGISEALIATATGMMVALFTL 173
Query: 194 IAYNKFIEDSKKFAMQMEGFANEF 217
I + F +++ + ME +
Sbjct: 174 IFASLFRALARRQIVLMETAGTQL 197
>gi|282877761|ref|ZP_06286574.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Prevotella buccalis ATCC 35310]
gi|281300077|gb|EFA92433.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Prevotella buccalis ATCC 35310]
Length = 276
Score = 81.0 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 30/202 (14%), Positives = 72/202 (35%), Gaps = 22/202 (10%)
Query: 33 IFSILSWSVI------IQKSVNFITLRRQFREFEQLFW---SGQSLETVCKSLKNHHNIG 83
S+++ +I I++ + + F + LE + +
Sbjct: 83 FMSLVALVLILGLAFCIERIIYLSLSEIDAKRFMTDVTTKIESKDLEGAKQQCQTTRG-P 141
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
+A++ ++ + + I+R + + + + + S++ +
Sbjct: 142 VASLCYEGLNRVDEP-----------IENIERSVASYGSVQASNLEKGCSWITLFIAMAP 190
Query: 144 LVGILGAVLGMMGFFQSIAGYYS-NNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIED 202
+G LG V+GM+ F I + + G+ +LI+ + G+ V++ + YN +
Sbjct: 191 SLGFLGTVIGMIMTFDQIQMAGDISPTIVAAGMKVALITTIFGIIVALILQVFYNYILSK 250
Query: 203 SKKFAMQMEGFANEFSAILSRQ 224
QME A L +
Sbjct: 251 IDHITAQMEESAITLLDALMKH 272
>gi|218264445|ref|ZP_03478286.1| hypothetical protein PRABACTJOHN_03982 [Parabacteroides johnsonii
DSM 18315]
gi|218221989|gb|EEC94639.1| hypothetical protein PRABACTJOHN_03982 [Parabacteroides johnsonii
DSM 18315]
Length = 245
Score = 81.0 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 27/198 (13%), Positives = 70/198 (35%), Gaps = 20/198 (10%)
Query: 33 IFSILSWSVII------QKSVNFITLRRQFREFEQLFWSGQSLE--TVCKSLKNHHNIGL 84
S+++ ++I ++ + + + K++ +
Sbjct: 50 FMSLVAIALIFGLAFCLERIIYLNLAETNSSKLLKSIEDALDKGDVEGAKAIARDTRGPI 109
Query: 85 AAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLL 144
A+I + + D +++ + + + + +S++ +
Sbjct: 110 ASIAYQGLMRIDQG-----------IDVVEKSIVSYGGVQGGLLEKNMSWITLFIAMAPS 158
Query: 145 VGILGAVLGMMGFFQSIAGYYS-NNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDS 203
+G LG V+GM+ F I + V G+ +LI+ + GL V++ + YN +
Sbjct: 159 LGFLGTVVGMVMAFDKIEQVGDISPTVVAGGMKVALITTVGGLVVALILQVFYNYLLSKL 218
Query: 204 KKFAMQMEGFANEFSAIL 221
+ QME + ++
Sbjct: 219 EAILNQMEDASITLLDMV 236
>gi|95929656|ref|ZP_01312398.1| MotA/TolQ/ExbB proton channel [Desulfuromonas acetoxidans DSM 684]
gi|95134353|gb|EAT16010.1| MotA/TolQ/ExbB proton channel [Desulfuromonas acetoxidans DSM 684]
Length = 144
Score = 81.0 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 22/85 (25%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
+T +L + ++ S +G+LG VLG+M F ++ + + + G+ +L +GL
Sbjct: 52 LTRRLHIIATIGSNAPFIGLLGTVLGIMLTFYTMGQQGAVDTHAIMTGLALALKVTAIGL 111
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQME 211
++IP+ YN I +K+ ++ E
Sbjct: 112 VIAIPTVAFYNVLIRRAKEMLLEWE 136
>gi|317010183|gb|ADU80763.1| biopolymer transport protein [Helicobacter pylori India7]
gi|317179621|dbj|BAJ57409.1| biopolymer transport protein [Helicobacter pylori F30]
Length = 150
Score = 81.0 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 19/89 (21%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI-AGYYSNNVVSIPGIIESLISILLGL 186
+ ++L+ + ++ S +G+LG V+G+M F + + + + + +L + +GL
Sbjct: 49 LHKRLTLVATIGSNAPYIGLLGTVMGIMLTFMDLGSASGIDTKAIMTNLALALKATGMGL 108
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFAN 215
V+IP+ + YN + S+ + + F +
Sbjct: 109 LVAIPAIVIYNLLVRKSEILVTKWDIFHH 137
>gi|224372375|ref|YP_002606747.1| exbb\tolq family transport protein [Nautilia profundicola AmH]
gi|223589887|gb|ACM93623.1| exbb\tolq family transport protein [Nautilia profundicola AmH]
Length = 182
Score = 81.0 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 20/93 (21%), Positives = 46/93 (49%), Gaps = 1/93 (1%)
Query: 118 DVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIE 177
D I E ++FLG ++S +G+ G V+G++ F S+ + N++ P I +
Sbjct: 81 DACIQAARTEAESGITFLGIVASTAPFIGLFGTVIGILTAFSSMQSVTTINMI-APAIAD 139
Query: 178 SLISILLGLCVSIPSSIAYNKFIEDSKKFAMQM 210
+L++ +G+ V++P+ + + + +
Sbjct: 140 ALVATAVGIIVAVPAYSFHQILSKKVEDLISIL 172
>gi|149177142|ref|ZP_01855749.1| probable TolQ [Planctomyces maris DSM 8797]
gi|148844034|gb|EDL58390.1| probable TolQ [Planctomyces maris DSM 8797]
Length = 218
Score = 81.0 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 27/136 (19%), Positives = 55/136 (40%), Gaps = 8/136 (5%)
Query: 95 WKKSCDKGARSPIGIQDRIDRMMDVAIARELEE-----ITEKLSFLGSMSSAGLLVGILG 149
W K+ + + +R + + +A + E + ++S++ ++ + ++G+LG
Sbjct: 78 WSKAVPQLILVAMANLERPAKKLRQMLAEKFERDILADLEYRMSWISTIVKSAPMLGLLG 137
Query: 150 AVLGMMGFFQSIAG---YYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKF 206
V+GM+ F I + I +L + GL V+IP +A K
Sbjct: 138 TVIGMINAFDKIGNMQESGGDPSQLAGEISFALFTTAAGLAVAIPLVMAGALIHVRIGKL 197
Query: 207 AMQMEGFANEFSAILS 222
++ EF IL
Sbjct: 198 QDSVQEHTGEFLEILE 213
>gi|308064202|gb|ADO06089.1| biopolymer transport protein [Helicobacter pylori Sat464]
Length = 150
Score = 81.0 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 19/89 (21%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI-AGYYSNNVVSIPGIIESLISILLGL 186
+ ++L+ + ++ S +G+LG V+G+M F + + + + + +L + +GL
Sbjct: 49 LHKRLTLVATIGSNAPYIGLLGTVMGIMLTFMDLGSASGIDTKAIMTNLALALKATGMGL 108
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFAN 215
V+IP+ + YN + S+ + + F +
Sbjct: 109 LVAIPAIVIYNLLVRKSEILVTKWDIFHH 137
>gi|157374711|ref|YP_001473311.1| MotA/TolQ/ExbB proton channel [Shewanella sediminis HAW-EB3]
gi|157317085|gb|ABV36183.1| MotA/TolQ/ExbB proton channel [Shewanella sediminis HAW-EB3]
Length = 451
Score = 81.0 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 26/110 (23%), Positives = 56/110 (50%), Gaps = 1/110 (0%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-V 169
+ ++ +D AI +E + ++S + +++ ++G+LG V GM+ FQSI + + +
Sbjct: 334 ETLELKLDEAILKETPALETRISIIKVLAAIAPMMGLLGTVTGMIATFQSIQLFGTGDPK 393
Query: 170 VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
+ GI +L++ + GL ++P + + I SK +E + A
Sbjct: 394 LMAGGISMALMTTVQGLVAALPLMLMHAVVIARSKSIVQVLEEQSAGIVA 443
>gi|315585833|gb|ADU40214.1| TonB family auxiliary protein ExbB [Helicobacter pylori 35A]
Length = 150
Score = 81.0 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 19/89 (21%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI-AGYYSNNVVSIPGIIESLISILLGL 186
+ ++L+ + ++ S +G+LG V+G+M F + + + + + +L + +GL
Sbjct: 49 LHKRLTLVATIGSNAPYIGLLGTVMGIMLTFMDLGSASGIDTKAIMTNLALALKATGMGL 108
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFAN 215
V+IP+ + YN + S+ + + F +
Sbjct: 109 LVAIPAIVIYNLLVRKSEILVTKWDIFHH 137
>gi|148926909|ref|ZP_01810587.1| exbB\tolQ family transport protein [Campylobacter jejuni subsp.
jejuni CG8486]
gi|145844486|gb|EDK21594.1| exbB\tolQ family transport protein [Campylobacter jejuni subsp.
jejuni CG8486]
Length = 184
Score = 81.0 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 32/200 (16%), Positives = 74/200 (37%), Gaps = 30/200 (15%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
IF F + ++ L ++ IL++S++ + T R + +E SLE +
Sbjct: 6 IFHFFNSSSIITYIVLLWLSLYFILAFSILFARLTYLATWRNKEKE---------SLEIL 56
Query: 73 CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKL 132
L +I D +++ + L
Sbjct: 57 L--LGEKDLSRTDSILRK------------------CNDTTSNHLEIYKNLASRRASAGL 96
Query: 133 SFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPS 192
++L ++S +G+ G V+ ++ F + S +++ P I E+L++ G+ V+IP+
Sbjct: 97 TWLSIIASTSPFIGLFGTVISILETFGGLGTQNSLSII-APKISEALVATGCGILVAIPA 155
Query: 193 SIAYNKFIEDSKKFAMQMEG 212
+ + + ++
Sbjct: 156 YTFHLIIKRKAFELLSIIDS 175
>gi|217033924|ref|ZP_03439348.1| hypothetical protein HP9810_870g56 [Helicobacter pylori 98-10]
gi|216943687|gb|EEC23132.1| hypothetical protein HP9810_870g56 [Helicobacter pylori 98-10]
Length = 150
Score = 81.0 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 19/89 (21%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI-AGYYSNNVVSIPGIIESLISILLGL 186
+ ++L+ + ++ S +G+LG V+G+M F + + + + + +L + +GL
Sbjct: 49 LHKRLTLVATIGSNAPYIGLLGTVIGIMLTFMDLGSASGIDTKAIMTNLALALKATGMGL 108
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFAN 215
V+IP+ + YN + S+ + + F +
Sbjct: 109 LVAIPAIVIYNLLVRKSEILVTKWDIFHH 137
>gi|330975324|gb|EGH75390.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. aptata str.
DSM 50252]
Length = 77
Score = 81.0 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 27/73 (36%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 155 MGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGF 213
M F+ +A + ++ PGI E+LI+ +GL +IP+ IAYN+F S+ + F
Sbjct: 1 MNSFRGLATAQQATLATVAPGIAEALIATAIGLFAAIPAVIAYNRFAARSETLISRYYTF 60
Query: 214 ANEFSAILSRQTE 226
A+EF AIL R+
Sbjct: 61 ADEFQAILHRKVH 73
>gi|163751085|ref|ZP_02158315.1| MotA/TolQ/ExbB proton channel family protein [Shewanella benthica
KT99]
gi|161329041|gb|EDQ00113.1| MotA/TolQ/ExbB proton channel family protein [Shewanella benthica
KT99]
Length = 284
Score = 81.0 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 26/110 (23%), Positives = 57/110 (51%), Gaps = 1/110 (0%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-V 169
+ ++ +D AI +E + ++S + +++ ++G+LG V GM+ FQSI + +++
Sbjct: 167 ETLELKLDEAILKETPALEARISIIKVLAAIAPMMGLLGTVTGMIATFQSIQLFGTSDPK 226
Query: 170 VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
+ GI +L++ + GL ++P + + I SK +E + A
Sbjct: 227 LMAGGISMALMTTVQGLVAALPLMLMHAIVIARSKSIVQVLEEQSAGMVA 276
>gi|332826691|gb|EGJ99513.1| hypothetical protein HMPREF9455_04109 [Dysgonomonas gadei ATCC
BAA-286]
Length = 235
Score = 81.0 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 34/195 (17%), Positives = 76/195 (38%), Gaps = 18/195 (9%)
Query: 40 SVIIQKSVNFITLRRQ----FREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEW 95
VII K + L ++ +L G+ ++ K A + + + ++
Sbjct: 52 YVIINKWLVVNRLGKKDSVWLSRVVELIHEGK-VDKALKFCVERP-YASAKVIAAGLKDF 109
Query: 96 KKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMM 155
+ + I M+V +++ + ++++LG +S ++G LG + G++
Sbjct: 110 DRDDKE-----------IQESMEVEARQQISILENQMNWLGITASIAPMLGFLGTIFGVI 158
Query: 156 GFFQSIAGYYSNNVVSIP-GIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFA 214
F IA + +I G+ + +I GL V I + Y K + ++ +
Sbjct: 159 KIFYDIAKTNDLAIDTISTGLYQKMICSGAGLLVGIIAYAGYYVLNGRIDKVVVNIDKES 218
Query: 215 NEFSAILSRQTEGNI 229
NE + G++
Sbjct: 219 NEVLKAIRAYKRGSV 233
>gi|325300426|ref|YP_004260343.1| MotA/TolQ/ExbB proton channel [Bacteroides salanitronis DSM 18170]
gi|324319979|gb|ADY37870.1| MotA/TolQ/ExbB proton channel [Bacteroides salanitronis DSM 18170]
Length = 267
Score = 81.0 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 32/201 (15%), Positives = 77/201 (38%), Gaps = 18/201 (8%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITL----RRQFREFEQLFWSGQSLETVCKSLKNHHNIG 83
++L+ I +L + I++ + ++ + E G K++ +
Sbjct: 73 MSLVAIALVLGLAFCIERIIYLSLAEVDVKKLMAKIEAALEKGDV--EGAKTVCRNTRGP 130
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
+A+I + + D ++R + + + + S++ +
Sbjct: 131 VASICYQGLMRIDEGL-----------DVVERSVVSYGGVQSGYLEKGCSWITLFIAMAP 179
Query: 144 LVGILGAVLGMMGFFQSIAGYYS-NNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIED 202
+G LG V+GM+ F +I + V G+ +LI+ + GL V++ + YN +
Sbjct: 180 SLGFLGTVIGMVMAFDNIQRAGDISPTVVAGGMKVALITTIFGLIVAMILQVFYNYILAK 239
Query: 203 SKKFAMQMEGFANEFSAILSR 223
+ QME + ++ +
Sbjct: 240 IEAITSQMEDSSITLLDLIMK 260
>gi|288927599|ref|ZP_06421446.1| MotA/TolQ/ExbB proton channel family protein [Prevotella sp. oral
taxon 317 str. F0108]
gi|288330433|gb|EFC69017.1| MotA/TolQ/ExbB proton channel family protein [Prevotella sp. oral
taxon 317 str. F0108]
Length = 266
Score = 80.6 bits (198), Expect = 1e-13, Method: Composition-based stats.
Identities = 30/186 (16%), Positives = 67/186 (36%), Gaps = 16/186 (8%)
Query: 43 IQKSVNFITLRRQFREFEQLFW---SGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSC 99
I++ + + F S +E + +N +A+I ++ ++
Sbjct: 89 IERIIYLSLSEINAKRFMADLDAKISAGDIEGAKEQCRNTRG-PVASICYQGLTRISET- 146
Query: 100 DKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQ 159
D I+R + + + + S++ +G LG V+GM+ F
Sbjct: 147 ----------IDNIERSIVSYGTVQSANLEKGCSWITLFIVMAPSLGFLGTVIGMVMAFD 196
Query: 160 SIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFS 218
I + V G+ +LI+ + G+ V++ + YN + + QME +
Sbjct: 197 QIEQAGDISAPVVAAGMKVALITTIFGIIVALVLQVFYNYILSKIEHLVAQMEESSITLL 256
Query: 219 AILSRQ 224
+ +
Sbjct: 257 DSIMKH 262
>gi|325960151|ref|YP_004291617.1| MotA/TolQ/ExbB proton channel [Methanobacterium sp. AL-21]
gi|325331583|gb|ADZ10645.1| MotA/TolQ/ExbB proton channel [Methanobacterium sp. AL-21]
Length = 279
Score = 80.6 bits (198), Expect = 1e-13, Method: Composition-based stats.
Identities = 35/174 (20%), Positives = 75/174 (43%), Gaps = 19/174 (10%)
Query: 43 IQKSVNFITLRRQF-----REFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKK 97
+K + + + G SLE + +SL + N ++ I A+
Sbjct: 39 FEKILYLRKVSKVSLPQIMSTVNDSMERGGSLEAL-RSLGKYQN-PISKITSEALK---- 92
Query: 98 SCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGF 157
G R+ + ++D M+ E+ +T+ L+ L ++ L+G++G V+G+
Sbjct: 93 ---IGYRNNVEVED----AMERVFIVEMGNMTKGLNSLKTIIEIAPLLGLIGTVIGIWVT 145
Query: 158 FQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
F+++ G +N GI +LI+ + GL V+I Y+ ++ +++
Sbjct: 146 FKAM-GISANTSQMAEGIYIALITTIAGLTVAIVILPMYSYINSKIEEEIDKID 198
>gi|257458274|ref|ZP_05623423.1| MotA/TolQ/ExbB proton channel [Treponema vincentii ATCC 35580]
gi|257444301|gb|EEV19395.1| MotA/TolQ/ExbB proton channel [Treponema vincentii ATCC 35580]
Length = 229
Score = 80.6 bits (198), Expect = 1e-13, Method: Composition-based stats.
Identities = 29/112 (25%), Positives = 49/112 (43%), Gaps = 5/112 (4%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI 172
++ + + + L +++ L+G+LG V G+M FQ IA + +++
Sbjct: 99 LEEAFERTVQGLIAVQERGFILLSRIAAVAPLLGLLGTVTGLMAAFQKIAALGGSVDIAV 158
Query: 173 --PGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFA---NEFSA 219
GI E++I+ GL +I S Y F S + ME NEF A
Sbjct: 159 LSGGIWEAMITTATGLVTAIFSFAVYELFDWVSTRRVRDMEQLISVLNEFHA 210
>gi|319941212|ref|ZP_08015546.1| TonB system transporter ExbB [Sutterella wadsworthensis 3_1_45B]
gi|319805306|gb|EFW02119.1| TonB system transporter ExbB [Sutterella wadsworthensis 3_1_45B]
Length = 141
Score = 80.6 bits (198), Expect = 1e-13, Method: Composition-based stats.
Identities = 24/83 (28%), Positives = 40/83 (48%), Gaps = 1/83 (1%)
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
+T L+ L + S VG+LG V+G+M F + + N + G+ +L + LGL
Sbjct: 52 LTNNLTTLYIIYSNAPYVGLLGTVIGIMITFYDMGQSGNINASDIMTGLSLALKATALGL 111
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQ 209
V+IP+ I YN + +
Sbjct: 112 TVAIPTLIFYNGLQRRINVLSTR 134
>gi|261840120|gb|ACX99885.1| MotA/TolQ/ExbB proton channel [Helicobacter pylori 52]
gi|297380702|gb|ADI35589.1| tonB-system energizer ExbB [Helicobacter pylori v225d]
Length = 150
Score = 80.6 bits (198), Expect = 1e-13, Method: Composition-based stats.
Identities = 19/89 (21%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI-AGYYSNNVVSIPGIIESLISILLGL 186
+ ++L+ + ++ S +G+LG V+G+M F + + + + + +L + +GL
Sbjct: 49 LHKRLTLVATIGSNAPYIGLLGTVMGIMLTFMDLGSASGIDTKAIMTNLALALKATGMGL 108
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFAN 215
V+IP+ + YN + S+ + + F +
Sbjct: 109 LVAIPAIVIYNLLVRKSEILVTKWDIFHH 137
>gi|108563796|ref|YP_628112.1| biopolymer transport protein [Helicobacter pylori HPAG1]
gi|207092094|ref|ZP_03239881.1| biopolymer transport protein [Helicobacter pylori HPKX_438_AG0C1]
gi|208435313|ref|YP_002266979.1| biopolymer transport protein [Helicobacter pylori G27]
gi|254779956|ref|YP_003058063.1| Biopolymer transport protein ExbD/TolR; putative membrane protein
[Helicobacter pylori B38]
gi|308183540|ref|YP_003927667.1| biopolymer transport protein [Helicobacter pylori PeCan4]
gi|308185208|ref|YP_003929341.1| biopolymer transport protein [Helicobacter pylori SJM180]
gi|107837569|gb|ABF85438.1| biopolymer transport protein [Helicobacter pylori HPAG1]
gi|208433242|gb|ACI28113.1| biopolymer transport protein [Helicobacter pylori G27]
gi|254001869|emb|CAX30119.1| Biopolymer transport protein ExbD/TolR; putative membrane protein
[Helicobacter pylori B38]
gi|308061128|gb|ADO03024.1| biopolymer transport protein [Helicobacter pylori SJM180]
gi|308065725|gb|ADO07617.1| biopolymer transport protein [Helicobacter pylori PeCan4]
gi|317013211|gb|ADU83819.1| biopolymer transport protein [Helicobacter pylori Lithuania75]
gi|317182650|dbj|BAJ60434.1| biopolymer transport protein [Helicobacter pylori F57]
Length = 150
Score = 80.6 bits (198), Expect = 1e-13, Method: Composition-based stats.
Identities = 19/89 (21%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI-AGYYSNNVVSIPGIIESLISILLGL 186
+ ++L+ + ++ S +G+LG V+G+M F + + + + + +L + +GL
Sbjct: 49 LHKRLTLVATIGSNAPYIGLLGTVMGIMLTFMDLGSASGIDTKAIMTNLALALKATGMGL 108
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFAN 215
V+IP+ + YN + S+ + + F +
Sbjct: 109 LVAIPAIVIYNLLVRKSEILVTKWDIFHH 137
>gi|222823238|ref|YP_002574811.1| TonB system transport protein ExbB [Campylobacter lari RM2100]
gi|222538459|gb|ACM63560.1| TonB system transport protein ExbB [Campylobacter lari RM2100]
Length = 186
Score = 80.6 bits (198), Expect = 1e-13, Method: Composition-based stats.
Identities = 35/206 (16%), Positives = 79/206 (38%), Gaps = 33/206 (16%)
Query: 9 MDI-SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFIT-LRRQFREFEQLFWSG 66
MD +IF F L ++ L ++ ILS+S++ + + + + + E L
Sbjct: 1 MDFQAIFHFFENTSLITYIVLAWLSVYFILSFSILFSRLMLINKWTQNESQALEALMRGE 60
Query: 67 QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
+ L LK + + M++ +
Sbjct: 61 KDLSQSASILKK------------------------------CVEVDETKMNIYKNSVEK 90
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGL 186
+ T L++LG ++S +G+ G V+ ++ F + S +++ P I E+L++ G+
Sbjct: 91 KATVGLTWLGIIASTSPFIGLFGTVISILETFGGLEMQNSLSII-APKISEALVATGCGI 149
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEG 212
V+IP+ + + + ++
Sbjct: 150 LVAIPAYSFHLIIKRKAYELINILDS 175
>gi|317009742|gb|ADU80322.1| biopolymer transport protein [Helicobacter pylori India7]
Length = 189
Score = 80.6 bits (198), Expect = 1e-13, Method: Composition-based stats.
Identities = 31/205 (15%), Positives = 78/205 (38%), Gaps = 28/205 (13%)
Query: 17 FMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFI-TLRRQFREFEQLFWSGQSLETVCKS 75
F + G ++ + ++ +++ V + KS+ L+R+ +++
Sbjct: 9 FNKSGFVTTLVLVWISLYLVMTLWVFLYKSIVLKIELKREM-------------QSLSNI 55
Query: 76 LKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFL 135
L + +F K++ + S +Q +++ + T L L
Sbjct: 56 LNGAQDAPEHFMFNK-----KRNDETKRYSNELLQAWKHQVLKQS--------TTGLVVL 102
Query: 136 GSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-VVSIPGIIESLISILLGLCVSIPSSI 194
+SS +G+ G V+ ++ F ++ + V P I ++LI+ G+ +IP+
Sbjct: 103 SIISSTAPFIGLFGTVVEILEAFNNLGALGQASFGVIAPIISKALIATAAGILAAIPAYS 162
Query: 195 AYNKFIEDSKKFAMQMEGFANEFSA 219
Y ++ ++ + S+
Sbjct: 163 FYLILRRKVYDLSVYVQMQVDILSS 187
>gi|283955275|ref|ZP_06372775.1| MotA/TolQ/ExbB proton channel family protein [Campylobacter jejuni
subsp. jejuni 414]
gi|283793189|gb|EFC31958.1| MotA/TolQ/ExbB proton channel family protein [Campylobacter jejuni
subsp. jejuni 414]
Length = 184
Score = 80.6 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 31/204 (15%), Positives = 72/204 (35%), Gaps = 38/204 (18%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
IF F + ++ L ++ IL++S++ K T W + E++
Sbjct: 6 IFHFFNSSSIITYIVLLWLSLYFILAFSILFAKLTYLAT------------WKSKEKESL 53
Query: 73 CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGI----QDRIDRMMDVAIARELEEI 128
E +K I D +++
Sbjct: 54 ---------------------EILLLGEKDLSHTDSILRKCNDTTLNHLEIYKNLASRRA 92
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCV 188
+ L++L ++S +G+ G V+ ++ F + S +++ P I E+L++ G+ V
Sbjct: 93 STGLTWLSIIASTSPFIGLFGTVISILETFGGLGTQNSLSII-APKISEALVATGCGILV 151
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEG 212
+IP+ + + + ++
Sbjct: 152 AIPAYTFHLIIKRKAFELLSIIDS 175
>gi|261838720|gb|ACX98486.1| biopolymer transport accessory protein [Helicobacter pylori 51]
Length = 150
Score = 80.6 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 19/89 (21%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI-AGYYSNNVVSIPGIIESLISILLGL 186
+ ++L+ + ++ S +G+LG V+G+M F + + + + + +L + +GL
Sbjct: 49 LHKRLTLVATIGSNAPYIGLLGTVMGIMLTFMDLGSASGIDTKAIMTNLALALKATGMGL 108
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFAN 215
V+IP+ + YN + S+ + + F +
Sbjct: 109 LVAIPAIVIYNLLVRKSEILVTKWDIFHH 137
>gi|15612403|ref|NP_224056.1| biopolymer transport protein [Helicobacter pylori J99]
gi|9910668|sp|Q9ZJH1|EXBL2_HELPJ RecName: Full=Putative biopolymer transport protein exbB-like 2
gi|4155948|gb|AAD06914.1| BIOPOLYMER TRANSPORT PROTEIN [Helicobacter pylori J99]
gi|307638096|gb|ADN80546.1| biopolymer transport protein [Helicobacter pylori 908]
gi|317014857|gb|ADU82293.1| biopolymer transport protein [Helicobacter pylori Gambia94/24]
gi|325996697|gb|ADZ52102.1| Ferric siderophore transport system/ biopolymer transport protein
[Helicobacter pylori 2018]
gi|325998289|gb|ADZ50497.1| Biopolymer transport protein [Helicobacter pylori 2017]
Length = 150
Score = 80.6 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 19/89 (21%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI-AGYYSNNVVSIPGIIESLISILLGL 186
+ ++L+ + ++ S +G+LG V+G+M F + + + + + +L + +GL
Sbjct: 49 LHKRLTLVATIGSNAPYIGLLGTVMGIMLTFMDLGSASGIDTKAIMTNLALALKATGMGL 108
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFAN 215
V+IP+ + YN + S+ + + F +
Sbjct: 109 LVAIPAIVIYNLLVRKSEILVTKWDIFHH 137
>gi|301166671|emb|CBW26247.1| putative motility membrane protein [Bacteriovorax marinus SJ]
Length = 233
Score = 80.6 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 26/125 (20%), Positives = 61/125 (48%), Gaps = 2/125 (1%)
Query: 99 CDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFF 158
G + +D+I +D I ++ +++S+LG +++ L+G+LG + G++ F
Sbjct: 91 LKSGLKRANQEKDQIQDAVDSTILEVTPKVDKRMSYLGLVANVSTLIGLLGTIYGLIESF 150
Query: 159 QSIAGY--YSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANE 216
++A S + GI +++ + GL +I + +N S+K ++E ++ +
Sbjct: 151 AAVANADPSSKAKLLALGISKAMNTTAFGLISAISIMVIHNILSNKSEKIIAEIEEYSLK 210
Query: 217 FSAIL 221
+L
Sbjct: 211 LVDLL 215
>gi|255323500|ref|ZP_05364631.1| TonB-system energizer ExbB [Campylobacter showae RM3277]
gi|255299537|gb|EET78823.1| TonB-system energizer ExbB [Campylobacter showae RM3277]
Length = 142
Score = 80.6 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 24/88 (27%), Positives = 42/88 (47%), Gaps = 1/88 (1%)
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVS-IPGIIESLISILL 184
E +T L+ L + S +G+LG V G+M F + + S + G+ +L + L
Sbjct: 50 ESVTRNLTTLYIVYSNAPYIGLLGTVAGIMVTFYDMGMSGGIDTKSIMVGLSLALKATAL 109
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEG 212
GL V+IP+ + YN F+ + +
Sbjct: 110 GLIVAIPTLMIYNAFMRKVDVLVNRYKA 137
>gi|317011576|gb|ADU85323.1| biopolymer transport protein [Helicobacter pylori SouthAfrica7]
Length = 150
Score = 80.6 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 19/89 (21%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI-AGYYSNNVVSIPGIIESLISILLGL 186
+ ++L+ + ++ S +G+LG V+G+M F + + + + + +L + +GL
Sbjct: 49 LHKRLTLVATIGSNAPYIGLLGTVMGIMLTFMDLGSASGIDTKAIMTNLALALKATGMGL 108
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFAN 215
V+IP+ + YN + S+ + + F +
Sbjct: 109 LVAIPAIVIYNMLVRKSEILVTKWDIFHH 137
>gi|57505325|ref|ZP_00371254.1| exbB/tolQ family transport protein Cj0109 [Campylobacter
upsaliensis RM3195]
gi|57016461|gb|EAL53246.1| exbB/tolQ family transport protein Cj0109 [Campylobacter
upsaliensis RM3195]
Length = 185
Score = 80.6 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 34/200 (17%), Positives = 76/200 (38%), Gaps = 30/200 (15%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
IF F + L ++ L + ILS++++ + R + +E SLET+
Sbjct: 6 IFHFFNESSLITYVVLAWLSFYFILSFAILFARLSFLANWRSKEKE---------SLETL 56
Query: 73 CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKL 132
L +I +K D +++ + L
Sbjct: 57 L--LGEKDLSRTDSIL-------RKCTDTSLSH-----------LEIYKNLAARRSSLGL 96
Query: 133 SFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPS 192
++L ++S +G+ G V+ ++ F + S +++ P I E+L++ G+ V+IP+
Sbjct: 97 TWLSIVASTSPFIGLFGTVISILETFGGLGTQNSLSII-APKISEALVATGCGILVAIPA 155
Query: 193 SIAYNKFIEDSKKFAMQMEG 212
+ + + ++
Sbjct: 156 YTFHLIIKRKAFELLSIIDS 175
>gi|330976699|gb|EGH76742.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. aptata str.
DSM 50252]
Length = 109
Score = 80.6 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 24/111 (21%), Positives = 46/111 (41%), Gaps = 3/111 (2%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAI 87
+ LL IFS+++W++++ K+ L RQ R + FW+ + L+ + LA +
Sbjct: 1 MALLVIFSLVTWALLLGKTFQHWRLTRQNRRYATQFWAARDLKNALHL--PNSEGSLARL 58
Query: 88 FMSAMSEWKKSCDK-GARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGS 137
+ D QD ++R + I +E + + L S
Sbjct: 59 TDAGAQALAAPHDSPDLGHSWNRQDLLERSLRQQIHKERRRLESGMILLAS 109
>gi|312879009|ref|ZP_07738809.1| outer membrane transport energization protein ExbB [Aminomonas
paucivorans DSM 12260]
gi|310782300|gb|EFQ22698.1| outer membrane transport energization protein ExbB [Aminomonas
paucivorans DSM 12260]
Length = 211
Score = 80.6 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 43/196 (21%), Positives = 89/196 (45%), Gaps = 19/196 (9%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ----LFWSGQSLETVCKSLKNHHN 81
I+ +L S+ + +V+ ++ + F E+ W +S E + L +
Sbjct: 12 AIMWVLLGISVAAGAVVAERLLFFRRASTDPVRLEEGIGTALWE-ESPEEALR-LAASRD 69
Query: 82 IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSA 141
L IF +A+ W + + +++ + RE+ + LS L +++
Sbjct: 70 GSLHRIFAAALGHW-----------DAPAETLKLLLEQELRREVFRWEKGLSLLSALARV 118
Query: 142 GLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKF 199
L+G+LG VLGM+ F+++ AG S +V GI ++L++ + GL V++P +A+
Sbjct: 119 APLLGLLGTVLGMVEIFRALPSAGMASPMLVLSGGIWKALLTTVAGLVVAVPIVLAHTYL 178
Query: 200 IEDSKKFAMQMEGFAN 215
+ + +E A+
Sbjct: 179 VSRILRAEEGLERGAD 194
>gi|15646054|ref|NP_208236.1| biopolymer transport protein (exbB) [Helicobacter pylori 26695]
gi|3913602|sp|O25986|EXBL2_HELPY RecName: Full=Putative biopolymer transport protein exbB-like 2
gi|2314617|gb|AAD08483.1| biopolymer transport protein (exbB) [Helicobacter pylori 26695]
Length = 150
Score = 80.6 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 19/89 (21%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI-AGYYSNNVVSIPGIIESLISILLGL 186
+ ++L+ + ++ S +G+LG V+G+M F + + + + + +L + +GL
Sbjct: 49 LHKRLTLVATIGSNAPYIGLLGTVMGIMLTFMDLGSASGIDTKAIMTNLALALKATGMGL 108
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFAN 215
V+IP+ + YN + S+ + + F +
Sbjct: 109 LVAIPAIVIYNLLVRKSEILVTKWDIFHH 137
>gi|218781520|ref|YP_002432838.1| MotA/TolQ/ExbB proton channel [Desulfatibacillum alkenivorans
AK-01]
gi|218762904|gb|ACL05370.1| MotA/TolQ/ExbB proton channel [Desulfatibacillum alkenivorans
AK-01]
Length = 202
Score = 80.6 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 39/187 (20%), Positives = 73/187 (39%), Gaps = 17/187 (9%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLR-RQFREFEQLFWSGQSLETVCKSLKNHHNIGL 84
++ L + S+L W +II++ + +R R + + + +
Sbjct: 20 LVMEPLLLISVLMWVLIIKRGLYLRRMRVRNMPREMAA--------QLIQENQQPDFMEF 71
Query: 85 AAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLL 144
+SE+ K + MD + ++LS + ++S L
Sbjct: 72 RGATALVVSEFLKRREANPGVD-------RSTMDETVMAVASSFDKQLSVITVLASIAPL 124
Query: 145 VGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDS 203
+G+LG VLGM+ F I+ + + N GI E+LIS GL V+IP N +
Sbjct: 125 LGLLGTVLGMISTFDVISLHGTGNARAMAGGISEALISTQTGLLVAIPGLTMKNFLASRA 184
Query: 204 KKFAMQM 210
+ ++
Sbjct: 185 QTLKHRV 191
>gi|332877800|ref|ZP_08445539.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Capnocytophaga sp. oral taxon 329 str. F0087]
gi|332684265|gb|EGJ57123.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Capnocytophaga sp. oral taxon 329 str. F0087]
Length = 282
Score = 80.2 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 28/198 (14%), Positives = 75/198 (37%), Gaps = 18/198 (9%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITL----RRQFREFEQLFWSGQSLETVCKSLKNHHNIG 83
++L+ I + + I++ + ++ + E+ +G K++ +
Sbjct: 90 MSLVAIALVFGLAFCIERIIYLSLAEIDSKKLMAQIEERLNAGDV--EGAKTICRNTRGP 147
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
+A+I + + + ++R + A + + + S++ +
Sbjct: 148 IASICYQGLMRF-----------DDGVEDVERSITAYGAVQAGYLEKGCSWITLFIAMAP 196
Query: 144 LVGILGAVLGMMGFFQSIAGYYS-NNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIED 202
+G LG V+GM+ F I + + G+ +LI+ + G+ V++ + YN +
Sbjct: 197 SLGFLGTVIGMVMAFDQIQQAGDISPTIVAGGMKVALITTIFGIIVALVLQVFYNYILSK 256
Query: 203 SKKFAMQMEGFANEFSAI 220
++ ME +
Sbjct: 257 IEEITSNMEEATISLLDM 274
>gi|170727418|ref|YP_001761444.1| MotA/TolQ/ExbB proton channel [Shewanella woodyi ATCC 51908]
gi|169812765|gb|ACA87349.1| MotA/TolQ/ExbB proton channel [Shewanella woodyi ATCC 51908]
Length = 451
Score = 80.2 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 25/110 (22%), Positives = 56/110 (50%), Gaps = 1/110 (0%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV- 169
+ ++ +D AI +E + ++S + +++ ++G+LG V GM+ FQ+I + + +
Sbjct: 334 ETLELKLDEAILKETPALETRISIIKVLAAIAPMMGLLGTVTGMIATFQTIQLFGTGDPR 393
Query: 170 VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
+ GI +L++ + GL ++P + + I SK +E + A
Sbjct: 394 LMAGGISMALMTTVQGLVAALPLMLMHAIVIARSKSVVQVLEEQSAGIVA 443
>gi|302346731|ref|YP_003815029.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Prevotella melaninogenica ATCC 25845]
gi|302150523|gb|ADK96784.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Prevotella melaninogenica ATCC 25845]
Length = 277
Score = 80.2 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 31/185 (16%), Positives = 65/185 (35%), Gaps = 16/185 (8%)
Query: 43 IQKSVNFITLRRQFREFEQLFWS---GQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSC 99
I++ + + F +E K+L +A+I + S
Sbjct: 96 IERIIYLSLSEIDAKRFVGKLEDMIVAGEIEQA-KALSRDTRGPVASICYQGLLRIDDS- 153
Query: 100 DKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQ 159
+ I+R + + + + + S++ + +G LG V+GM+ F
Sbjct: 154 ----------IENIERSVTSYGSVQSANLEKGCSWITLFIAMAPSLGFLGTVIGMVMAFD 203
Query: 160 SIAGYYS-NNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFS 218
I + + G+ +LI+ + G+ V++ I YN + QME A
Sbjct: 204 QIQEAGDISPTIVASGMKVALITTIFGIIVALVLQIFYNYILSKIDHITAQMEESAITLL 263
Query: 219 AILSR 223
+ +
Sbjct: 264 DAIMK 268
>gi|33318339|gb|AAQ05037.1|AF468825_1 ExbB [Pasteurella multocida]
gi|40556682|gb|AAC83228.2| ExbB [Pasteurella multocida]
Length = 152
Score = 80.2 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 20/110 (18%), Positives = 50/110 (45%), Gaps = 4/110 (3%)
Query: 107 IGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYS 166
+ + R++ +I ++ L+ + ++ S VG+LG V+G++ F +
Sbjct: 35 LSLLSRVNVASYESIHELDIDLQRHLTAISTIGSNAPYVGLLGTVIGILLTFYELGHSGG 94
Query: 167 --NNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFA 214
+ + + +L + +G+ V+IP+ + YN + +++ FA
Sbjct: 95 DIDAAAIMVHLSLALKATAVGILVAIPAMVCYNGLGRKVE--VNRLKWFA 142
>gi|330998277|ref|ZP_08322102.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Paraprevotella xylaniphila YIT 11841]
gi|329568666|gb|EGG50467.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Paraprevotella xylaniphila YIT 11841]
Length = 282
Score = 80.2 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 29/198 (14%), Positives = 75/198 (37%), Gaps = 18/198 (9%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITL----RRQFREFEQLFWSGQSLETVCKSLKNHHNIG 83
++L+ I + + I++ + ++ + E+ +G K++ +
Sbjct: 90 MSLVAIALVFGLAFCIERIIYLSLAEIDSKKLMAQIEERLNAGDV--EGAKTICRNTRGP 147
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
+A+I + + + ++R + A + + + S++ +
Sbjct: 148 IASICYQGLMRF-----------DDGVEDVERSITAYGAVQAGYLEKGCSWITLFIAMAP 196
Query: 144 LVGILGAVLGMMGFFQSIAGYYS-NNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIED 202
+G LG V+GM+ F I + V G+ +LI+ + G+ V++ + YN +
Sbjct: 197 SLGFLGTVIGMVMAFDQIQAAGDISPTVVAGGMKVALITTIFGIIVALVLQVFYNYILSK 256
Query: 203 SKKFAMQMEGFANEFSAI 220
++ ME +
Sbjct: 257 IEEITSNMEEATISLLDM 274
>gi|330976550|gb|EGH76599.1| biopolymer transport protein ExbB [Pseudomonas syringae pv. aptata
str. DSM 50252]
Length = 100
Score = 80.2 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 24/78 (30%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 147 ILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIPSSIAYNKFIEDSKK 205
+ G V G+M QSI S ++ ++ G I +L++ +G+ V++P+ + YN F+ K
Sbjct: 1 MFGTVWGIMEALQSIGVTGSASLEAVAGPIGHALVATGVGIAVAVPAVLIYNFFLRRLKL 60
Query: 206 FAMQMEGFANEFSAILSR 223
M+ FA+ F A+ R
Sbjct: 61 AVADMDDFAHHFDALAQR 78
>gi|308062708|gb|ADO04596.1| biopolymer transport protein [Helicobacter pylori Cuz20]
Length = 150
Score = 80.2 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 19/89 (21%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI-AGYYSNNVVSIPGIIESLISILLGL 186
+ ++L+ + ++ S +G+LG V+G+M F + + + + + +L + +GL
Sbjct: 49 LHKRLTLVATIGSNAPYIGLLGTVMGIMLTFMDLGSASGIDTKAIMTNLALALKATGMGL 108
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFAN 215
V+IP+ + YN + S+ + + F +
Sbjct: 109 LVAIPAIVIYNLLVRKSEILVTKWDIFHH 137
>gi|86138576|ref|ZP_01057149.1| MotA/TolQ/ExbB proton channel family protein [Roseobacter sp.
MED193]
gi|85824636|gb|EAQ44838.1| MotA/TolQ/ExbB proton channel family protein [Roseobacter sp.
MED193]
Length = 363
Score = 80.2 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 41/193 (21%), Positives = 76/193 (39%), Gaps = 12/193 (6%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAI 87
I + S+++ ++I+ K + WS + + + AI
Sbjct: 166 IWAIAALSVITLALILWKIWRLALIGA---------WSRGKASKAVLAYEAGNPAAALAI 216
Query: 88 FMSAMSEWKKSCDKGARSPIGI-QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVG 146
M K G + + +DR + L + L L +++ L+G
Sbjct: 217 VKGRMGIRSKVVSAGLDALRDLPEDRAREETARIAKKHLAQAGTGLGALELIATIAPLLG 276
Query: 147 ILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSK 204
+LG VLGM+ FQ++ AG ++ + GI E+L++ G+ V+IP+S A F
Sbjct: 277 LLGTVLGMIAAFQALQQAGSKADPALLAGGIWEALLTTAAGMAVAIPASAALTWFESVIT 336
Query: 205 KFAMQMEGFANEF 217
+ +E A
Sbjct: 337 RIRQDIEDSATRL 349
>gi|118579889|ref|YP_901139.1| MotA/TolQ/ExbB proton channel [Pelobacter propionicus DSM 2379]
gi|118502599|gb|ABK99081.1| outer membrane transport energization protein ExbB [Pelobacter
propionicus DSM 2379]
Length = 144
Score = 80.2 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 48/87 (55%), Gaps = 3/87 (3%)
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA--GYYSNNVVSIPGIIESLISILL 184
E+T +L + ++ S +G+LG VLG+M F ++ G+ + V + G+ ++ +
Sbjct: 51 ELTSRLHLIATVGSNAPYLGLLGTVLGIMLTFATMGREGFMDTSKVMV-GLALAMKATAA 109
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQME 211
GLCV+IPS++ YN + K + E
Sbjct: 110 GLCVAIPSTVLYNLLLRRVKVLMFRWE 136
>gi|327313225|ref|YP_004328662.1| MotA/TolQ/ExbB proton channel family transporter [Prevotella
denticola F0289]
gi|326946218|gb|AEA22103.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Prevotella denticola F0289]
Length = 272
Score = 80.2 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 30/185 (16%), Positives = 67/185 (36%), Gaps = 16/185 (8%)
Query: 43 IQKSVNFITLRRQFREFEQLFW---SGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSC 99
I++ + + F + +E K+L +A+I + S
Sbjct: 90 IERIIYLSLSEIDAKRFVGRLEDMIAAGDIEQA-KTLSRDTRGPVASICYQGLLRIDDS- 147
Query: 100 DKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQ 159
+ I+R + + + + + S++ + +G LG V+GM+ F
Sbjct: 148 ----------IENIERSVTSYGSVQSANLEKGCSWITLFIAMAPSLGFLGTVIGMVMAFD 197
Query: 160 SIAGYYS-NNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFS 218
I + + G+ +LI+ + G+ V++ + YN + + QME A
Sbjct: 198 QIQEAGDISPTIVAAGMKVALITTIFGIIVALVLQVFYNYILSKIEHITAQMEESAISLL 257
Query: 219 AILSR 223
+ +
Sbjct: 258 DAIMK 262
>gi|294056494|ref|YP_003550152.1| MotA/TolQ/ExbB proton channel [Coraliomargarita akajimensis DSM
45221]
gi|293615827|gb|ADE55982.1| MotA/TolQ/ExbB proton channel [Coraliomargarita akajimensis DSM
45221]
Length = 264
Score = 80.2 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 41/211 (19%), Positives = 74/211 (35%), Gaps = 24/211 (11%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFI---TLRRQFREFEQLFWSGQS 68
++ F G A + L FSI + +II + L+
Sbjct: 57 TLIDQFKAGGWA----MYPLTFFSIAGFGLIIYNFMAVKPGVILKGDVTVEIDKKLEQLD 112
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ K L + I + ++ D P I++ I+ +A
Sbjct: 113 I-EGAKKLCEENPAPATNIIAAGLN----RVDLNNYDPEAIKEAIEESSSEELAGPF--- 164
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLC 187
+++L + S +VG+LG V GM+ F I + + ++ G I E+LI+ G+
Sbjct: 165 -VLINYLSVVGSLSPMVGLLGTVSGMVKAFNVIEAEGAGSAQALAGNISEALITTASGMI 223
Query: 188 VSIPSSIA-------YNKFIEDSKKFAMQME 211
V IP+ Y K + +E
Sbjct: 224 VGIPAMFFFFYFKNNYGKITSRVARVVGDLE 254
>gi|325270395|ref|ZP_08137000.1| MotA/TolQ/ExbB proton channel family protein [Prevotella
multiformis DSM 16608]
gi|324987339|gb|EGC19317.1| MotA/TolQ/ExbB proton channel family protein [Prevotella
multiformis DSM 16608]
Length = 279
Score = 80.2 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 41/210 (19%), Positives = 91/210 (43%), Gaps = 19/210 (9%)
Query: 13 IFALFMQMGLAVKCIITLLF---IFSILSWSVIIQKSVNFITL--RRQFREFEQLFWSGQ 67
++ + G+ V I TLL SI ++ + T + +F +
Sbjct: 60 VWGTIFKGGVVVPVIHTLLLTVLAMSI-------ERWLALKTAFGKGALPKFVANIKAAL 112
Query: 68 SLETVCKS--LKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDR---MMDVAIA 122
+ + K+ L + +A + ++++ +K + GA + + ++ + + A
Sbjct: 113 NANDLAKANQLCDKQKGSVANVVKASLNAYKDM-ETGANANLKKAQKVSKIQQAHEEATQ 171
Query: 123 RELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI-AGYYSNNVVSIPGIIESLIS 181
E+ +T L + ++ + G L G+LG V GM+ F ++ AG +++ GI E+LI+
Sbjct: 172 LEMPTLTMNLPIIATIVTLGTLTGLLGTVTGMIKSFSALSAGGGADSAALSAGISEALIN 231
Query: 182 ILLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
G+ S + ++YN + K ++
Sbjct: 232 TAFGIATSWCAVVSYNYYSNKVDKLTYALD 261
>gi|331007789|ref|ZP_08330903.1| MotA/TolQ/ExbB proton channel family protein [gamma proteobacterium
IMCC1989]
gi|330418398|gb|EGG92950.1| MotA/TolQ/ExbB proton channel family protein [gamma proteobacterium
IMCC1989]
Length = 74
Score = 80.2 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 27/73 (36%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 155 MGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGF 213
M F+ +A + ++ PGI E+LI+ +GL +IP+ +AYN+F ++ A E F
Sbjct: 1 MNSFRGLANATQATLATVAPGISEALIATAMGLFAAIPAVLAYNRFSARAETLANSYETF 60
Query: 214 ANEFSAILSRQTE 226
A EF +IL RQ
Sbjct: 61 AEEFISILQRQLH 73
>gi|127513405|ref|YP_001094602.1| MotA/TolQ/ExbB proton channel [Shewanella loihica PV-4]
gi|126638700|gb|ABO24343.1| MotA/TolQ/ExbB proton channel [Shewanella loihica PV-4]
Length = 451
Score = 80.2 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 26/110 (23%), Positives = 56/110 (50%), Gaps = 1/110 (0%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-V 169
+ ++ +D AI +E + ++S + +++ ++G+LG V GM+ FQSI + + +
Sbjct: 334 ETLELKLDEAILKETPALETRISIIKVLAAIAPMMGLLGTVTGMIATFQSIQLFGTGDPK 393
Query: 170 VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
+ GI +L++ + GL ++P + + I SK +E + A
Sbjct: 394 LMAGGISMALMTTVQGLVAALPLMLMHAIVIARSKSVVQVLEEQSAGIVA 443
>gi|315639290|ref|ZP_07894452.1| MotA/TolQ/ExbB proton channel family protein [Campylobacter
upsaliensis JV21]
gi|315480616|gb|EFU71258.1| MotA/TolQ/ExbB proton channel family protein [Campylobacter
upsaliensis JV21]
Length = 185
Score = 80.2 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 34/200 (17%), Positives = 76/200 (38%), Gaps = 30/200 (15%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
IF F + L ++ L + ILS++++ + R + +E SLET+
Sbjct: 6 IFHFFNESSLITYVVLAWLSFYFILSFAILFARLSFLANWRSKEKE---------SLETL 56
Query: 73 CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKL 132
L +I +K D +++ + L
Sbjct: 57 L--LGEKDLSRTDSIL-------RKCTDTSLSH-----------LEIYKNLAARRSSLGL 96
Query: 133 SFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPS 192
++L ++S +G+ G V+ ++ F + S +++ P I E+L++ G+ V+IP+
Sbjct: 97 TWLSIVASTSPFIGLFGTVISILETFGGLGTQNSLSII-APKISEALVATGCGILVAIPA 155
Query: 193 SIAYNKFIEDSKKFAMQMEG 212
+ + + ++
Sbjct: 156 YTFHLIIKRKAFELLSIIDS 175
>gi|32265852|ref|NP_859884.1| biopolymer transport protein [Helicobacter hepaticus ATCC 51449]
gi|32261901|gb|AAP76950.1| biopolymer transport protein [Helicobacter hepaticus ATCC 51449]
Length = 145
Score = 80.2 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVS-IPGIIESLISILL 184
E +++ L+ L + S VG+LG V+G+M F + + S + G+ +L + L
Sbjct: 50 EVLSKNLTALYIIYSNAPYVGLLGTVIGIMITFYDMGMSGGMDAQSIMIGLSTALKATAL 109
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQM 210
GL V+IP+ I YN F+ +
Sbjct: 110 GLVVAIPTLIVYNCFVRKMDVQLNRY 135
>gi|325997985|gb|ADZ50193.1| Biopolymer transport protein [Helicobacter pylori 2017]
Length = 192
Score = 79.8 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 33/210 (15%), Positives = 80/210 (38%), Gaps = 28/210 (13%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFI-TLRRQFREFEQLFWSGQSLE 70
SI F + G ++ + ++ +++ V + KS+ LRR+ +
Sbjct: 4 SIVYFFNKSGFVTTLVLVWISLYLVMTLWVFLYKSIVLKIELRREM-------------Q 50
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
++ L + +F K++ + S +Q +++ + T
Sbjct: 51 SLSNILNGAQDAPEHFMFNK-----KRNDETKRYSNELLQAWKHQVLKQS--------TT 97
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-VVSIPGIIESLISILLGLCVS 189
L L +SS +G+ V+ ++ F ++ + V +P I ++LI+ G+ +
Sbjct: 98 GLVVLSIISSTAPFIGLFWTVVEILEAFNNLGALGQASFGVIVPIISKALIATAAGILAA 157
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
IP+ Y ++ ++ + S+
Sbjct: 158 IPAYSFYLILKRKVYDLSVYVQMQVDILSS 187
>gi|317181128|dbj|BAJ58914.1| biopolymer transport protein [Helicobacter pylori F32]
Length = 150
Score = 79.8 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 19/89 (21%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI-AGYYSNNVVSIPGIIESLISILLGL 186
+ ++L+ + ++ S +G+LG V+G+M F + + + + + +L + +GL
Sbjct: 49 LHKRLTLVATIGSNAPYIGLLGTVMGIMLTFMDLGSASGIDTKAIMTNLALALKATGMGL 108
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFAN 215
V+IP+ + YN + S+ + + F +
Sbjct: 109 LVAIPAIVIYNLLVRKSEILVTKWDIFHH 137
>gi|157165553|ref|YP_001466347.1| ExbB\TolQ family transport protein [Campylobacter concisus 13826]
gi|112800123|gb|EAT97467.1| ExbB\TolQ family transport protein [Campylobacter concisus 13826]
Length = 155
Score = 79.8 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 26/111 (23%), Positives = 53/111 (47%), Gaps = 12/111 (10%)
Query: 117 MDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA-GYYSNNVVSIPGI 175
++V I+ + T L++L ++S +G+ G V+ ++ F + G + V P I
Sbjct: 44 LNVCISIAEKNATSGLTWLSVIASTSPFIGLFGTVVSILETFSQLGNGAGPSLGVIAPAI 103
Query: 176 IESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
E+L++ G+ V+IP+ +N I+ A E +++ RQ +
Sbjct: 104 SEALVATGCGIFVAIPAY-TFNLLIKRK----------AYELMSVIERQAD 143
>gi|57504647|ref|ZP_00370725.1| exbB/tolQ family transport protein Cj0109 [Campylobacter coli
RM2228]
gi|305432650|ref|ZP_07401811.1| MotA/TolQ/ExbB proton channel family protein [Campylobacter coli
JV20]
gi|57019416|gb|EAL56111.1| exbB/tolQ family transport protein Cj0109 [Campylobacter coli
RM2228]
gi|304444361|gb|EFM37013.1| MotA/TolQ/ExbB proton channel family protein [Campylobacter coli
JV20]
Length = 184
Score = 79.8 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 28/201 (13%), Positives = 73/201 (36%), Gaps = 32/201 (15%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG-QSLET 71
IF F + ++ L ++ ILS+ ++ + + + +E + G + L
Sbjct: 6 IFQFFGSSSIITYIVLAWLSLYFILSFFILFSRVTYLAAWKNKEKESLEALLLGEKDLSR 65
Query: 72 VCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEK 131
L+ + L+ +++ +
Sbjct: 66 TRSILRKCTDTSLSH------------------------------LEIYKNLASRRASNG 95
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIP 191
L++L ++S +G+ G V+ ++ F + S +++ P I E+L++ G+ V+IP
Sbjct: 96 LTWLSIVASTSPFIGLFGTVISILETFGGLGTQNSLSII-APKISEALVATGCGILVAIP 154
Query: 192 SSIAYNKFIEDSKKFAMQMEG 212
+ + + + ++
Sbjct: 155 AYTFHLIIKRKAFELLSIIDS 175
>gi|325856814|ref|ZP_08172345.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Prevotella denticola CRIS 18C-A]
gi|327314210|ref|YP_004329647.1| MotA/TolQ/ExbB proton channel family transporter [Prevotella
denticola F0289]
gi|325483319|gb|EGC86295.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Prevotella denticola CRIS 18C-A]
gi|326944633|gb|AEA20518.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Prevotella denticola F0289]
Length = 279
Score = 79.8 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 41/210 (19%), Positives = 91/210 (43%), Gaps = 19/210 (9%)
Query: 13 IFALFMQMGLAVKCIITLLF---IFSILSWSVIIQKSVNFITL--RRQFREFEQLFWSGQ 67
++ + G+ V I TLL SI ++ + T + +F +
Sbjct: 60 VWGTIFKGGVVVPVIHTLLLTVLAMSI-------ERWLALKTAFGKGALPKFVANIKAAL 112
Query: 68 SLETVCKS--LKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDR---MMDVAIA 122
+ + K+ L + +A + ++++ +K + GA + + ++ + + A
Sbjct: 113 NANDLAKANQLCDQQKGSVANVVKASLNAYKDM-ETGANANLKKAQKVAKIQQAHEEATQ 171
Query: 123 RELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI-AGYYSNNVVSIPGIIESLIS 181
E+ +T L + ++ + G L G+LG V GM+ F ++ AG +++ GI E+LI+
Sbjct: 172 LEMPTLTMNLPIIATIVTLGTLTGLLGTVTGMIKSFSALSAGGGADSAALSAGISEALIN 231
Query: 182 ILLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
G+ S + ++YN + K ++
Sbjct: 232 TAFGIATSWCAVVSYNYYSNKVDKLTYALD 261
>gi|253699091|ref|YP_003020280.1| MotA/TolQ/ExbB proton channel [Geobacter sp. M21]
gi|251773941|gb|ACT16522.1| MotA/TolQ/ExbB proton channel [Geobacter sp. M21]
Length = 211
Score = 79.8 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 26/199 (13%), Positives = 80/199 (40%), Gaps = 17/199 (8%)
Query: 29 TLLFIFSILSWSVIIQKSVNFITLRRQFR---EFEQLFWSGQSLETVCKSLKNHHNIGLA 85
LL + ++ +++ ++ +++Q R E + + + L N +
Sbjct: 18 ILLVLA--AGVAISVERWMHLNRVKKQNRQMWEEVHPVLAEGDFDRA-RELVNQDESAIG 74
Query: 86 AIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLV 145
+ ++ + + ++ I+ M+ ++ + ++ ++ +L +S+ L
Sbjct: 75 QMLSMGLAR---------QGAVRRREDIEIAMEESLMEIIPQLEKRTPYLALLSNIATLF 125
Query: 146 GILGAVLGMMGFFQSIAGYYSNNVVS--IPGIIESLISILLGLCVSIPSSIAYNKFIEDS 203
G+LG ++G++ F ++A + I E++ GL +IP + + + +
Sbjct: 126 GLLGTIMGLITAFTAVASASPAEKAALLAASISEAMNCTAFGLMAAIPLLLIHARLTSTT 185
Query: 204 KKFAMQMEGFANEFSAILS 222
+ +E + + +S
Sbjct: 186 GEIVGSLEMVSVKALNSIS 204
>gi|109946796|ref|YP_664024.1| biopolymer transport protein [Helicobacter acinonychis str. Sheeba]
gi|109714017|emb|CAJ99025.1| biopolymer transport protein [Helicobacter acinonychis str. Sheeba]
Length = 150
Score = 79.8 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 19/87 (21%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI-AGYYSNNVVSIPGIIESLISILLGL 186
+ ++L+ + ++ S +G+LG V+G+M F + + + + + +L + +GL
Sbjct: 49 LHKRLTLVATIGSNAPYIGLLGTVVGIMLTFMDLGSASGIDTKAIMTNLALALKATGMGL 108
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGF 213
V+IP+ + YN + S+ + + F
Sbjct: 109 LVAIPAIVIYNLLVRKSEILVTKWDIF 135
>gi|257459078|ref|ZP_05624197.1| ExbB\TolQ family transport protein [Campylobacter gracilis RM3268]
gi|257443463|gb|EEV18587.1| ExbB\TolQ family transport protein [Campylobacter gracilis RM3268]
Length = 191
Score = 79.8 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 33/219 (15%), Positives = 86/219 (39%), Gaps = 40/219 (18%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
++D+ I + F + +++ L ++ +++++++I + V W
Sbjct: 1 MLDL-ILSYFTRSTFITIFVLSWLSVYFVVTFTILISRFVGLSA------------W--- 44
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
++ L ++ M + S + +++ + +
Sbjct: 45 ---------QHREAKALESLLMGG----RISLSGSIFQKVNTDKISKEALEIYKGKAERD 91
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLC 187
T L++L ++S +G+ G V+ ++ F + G S P I E+L++ G+
Sbjct: 92 STSGLTWLSIVASTSPFIGLFGTVVSILHTFSKLGGGNSGIDTIAPAISEALVATGCGIF 151
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
V+IP+ F++ ++ A E +I++R +
Sbjct: 152 VAIPAY-----------TFSLLIKRKAYEVMSIINRTAD 179
>gi|118579677|ref|YP_900927.1| MotA/TolQ/ExbB proton channel [Pelobacter propionicus DSM 2379]
gi|118502387|gb|ABK98869.1| outer membrane transport energization protein ExbB [Pelobacter
propionicus DSM 2379]
Length = 147
Score = 79.8 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 27/87 (31%), Positives = 48/87 (55%), Gaps = 3/87 (3%)
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA--GYYSNNVVSIPGIIESLISILL 184
E+T KL + ++ S +G+LG V+G+M F ++ G+ N + + G+ +L + +
Sbjct: 51 ELTRKLHVIATIGSNAPYLGLLGTVMGIMLTFHTMGTEGFMDTNKIMV-GLALALKATAV 109
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQME 211
GL V+IPS YN + +K +Q E
Sbjct: 110 GLFVAIPSVTLYNLLLRRTKVLLIQWE 136
>gi|260592602|ref|ZP_05858060.1| MotA/TolQ/ExbB proton channel family protein [Prevotella veroralis
F0319]
gi|260535372|gb|EEX17989.1| MotA/TolQ/ExbB proton channel family protein [Prevotella veroralis
F0319]
Length = 279
Score = 79.8 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 45/207 (21%), Positives = 95/207 (45%), Gaps = 13/207 (6%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITL--RRQFREFEQLFWSGQSLE 70
++ + G+ V I TLL S+L ++ I++ + T + +F + +
Sbjct: 60 VWGTIFKGGVVVPVIHTLLL--SVL--AMSIERWMALKTAFGKGSLPKFVANIKAALNAN 115
Query: 71 TVCKS--LKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDR---MMDVAIAREL 125
+ K+ L + +A + ++++ +K + GA + + ++ + + A E+
Sbjct: 116 DLAKANQLCDQQKGSVANVVKASLNAYKDM-ETGANANLKKAQKVAKIQQAHEEATQLEM 174
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI-AGYYSNNVVSIPGIIESLISILL 184
+T L L +M + G L G+LG V GM+ F ++ AG +++ GI E+LI+
Sbjct: 175 PVLTMNLPILATMVTLGTLTGLLGTVTGMIKSFSALSAGGGADSAALSAGISEALINTAF 234
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQME 211
G+ S + ++YN F K ++
Sbjct: 235 GIATSWCAVVSYNFFSNKVDKLTYALD 261
>gi|108758311|ref|YP_631212.1| MotA/TolQ/ExbB proton channel family protein [Myxococcus xanthus DK
1622]
gi|27804882|gb|AAO22916.1| TolQ-like protein [Myxococcus xanthus]
gi|108462191|gb|ABF87376.1| MotA/TolQ/ExbB proton channel family protein [Myxococcus xanthus DK
1622]
Length = 260
Score = 79.8 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 32/193 (16%), Positives = 78/193 (40%), Gaps = 17/193 (8%)
Query: 38 SWSVIIQKSVNF-ITLRRQFREFEQLFWS---GQSLETVCKSLKNHHNIGLAAIFMSAMS 93
S +V +++ V F + +L+ K N LA + + +
Sbjct: 64 SLAVALERIVTLVFRYNLNAPPFMEQIAKLVRSGNLDRAVKVCAMAPNAPLAKVVRAGLV 123
Query: 94 EWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLG 153
+ + + + ++ AI +++++ +L S+++ LVG++G + G
Sbjct: 124 NANRGEIE-----------VSKAVEEAIVEHSPNVSKRIPWLWSLANIATLVGLVGTIFG 172
Query: 154 MMGFFQSIAG--YYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
++G FQ++ V+ GI +++ + L +++ I + +K +E
Sbjct: 173 LIGTFQALGNVPAEQKQVLLSDGISKAMNNTAFALSIAVICIIFHLFLTSYAKSMVEGLE 232
Query: 212 GFANEFSAILSRQ 224
A + +LSR+
Sbjct: 233 LNALKLENLLSRR 245
>gi|288574443|ref|ZP_06392800.1| MotA/TolQ/ExbB proton channel [Dethiosulfovibrio peptidovorans DSM
11002]
gi|288570184|gb|EFC91741.1| MotA/TolQ/ExbB proton channel [Dethiosulfovibrio peptidovorans DSM
11002]
Length = 205
Score = 79.8 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 47/215 (21%), Positives = 94/215 (43%), Gaps = 25/215 (11%)
Query: 6 LAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS 65
+A +S L G V CI S++ +V+++++ F+ + EQ
Sbjct: 1 MAESILSFLNL---GGPVVWCI----AGLSVIGLAVVLERAFFFMNSWENPEKVEQAL-- 51
Query: 66 GQSLET----VCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
+ L SL + L +F++ ++ WK D + ++D I
Sbjct: 52 CERLYEGDPAGATSLLREKDTSLRRLFLAGVNHWKTDG-----------DSLKMLLDGQI 100
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVS-IPGIIESLI 180
RE+ ++ LS L +++ L+G+LG VLGM+ FQS+ +V+ GI ++L+
Sbjct: 101 RREVFRWSKGLSILSAVARIAPLLGLLGTVLGMVDIFQSLPETDQAPMVALAGGIWKALL 160
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFAN 215
+ + GL V++P+ + ++ + A+
Sbjct: 161 TTVAGLAVAVPAVLCHSLLSSKVDDIEETLSRGAD 195
>gi|260911537|ref|ZP_05918123.1| MotA/TolQ/ExbB proton channel family protein [Prevotella sp. oral
taxon 472 str. F0295]
gi|260634327|gb|EEX52431.1| MotA/TolQ/ExbB proton channel family protein [Prevotella sp. oral
taxon 472 str. F0295]
Length = 328
Score = 79.5 bits (195), Expect = 3e-13, Method: Composition-based stats.
Identities = 30/186 (16%), Positives = 67/186 (36%), Gaps = 16/186 (8%)
Query: 43 IQKSVNFITLRRQFREFEQLFW---SGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSC 99
I++ + + F S +E + +N +A+I ++ ++
Sbjct: 151 IERIIYLSLSEINAKRFMADLDAKISAGDIEAAKEQCRNTRG-PVASICYQGLARISET- 208
Query: 100 DKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQ 159
D I+R + + + + S++ +G LG V+GM+ F
Sbjct: 209 ----------IDNIERSIVSYGTVQSANLEKGCSWITLFIVMAPSLGFLGTVIGMVMAFD 258
Query: 160 SIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFS 218
I + V G+ +LI+ + G+ V++ + YN + + QME +
Sbjct: 259 QIEQAGDISAPVVAAGMKVALITTIFGIIVALVLQVFYNYILSKIEHLVAQMEESSITLL 318
Query: 219 AILSRQ 224
+ +
Sbjct: 319 DSIMKH 324
>gi|254447982|ref|ZP_05061446.1| MotA/TolQ/ExbB proton channel [gamma proteobacterium HTCC5015]
gi|198262408|gb|EDY86689.1| MotA/TolQ/ExbB proton channel [gamma proteobacterium HTCC5015]
Length = 210
Score = 79.5 bits (195), Expect = 3e-13, Method: Composition-based stats.
Identities = 23/212 (10%), Positives = 76/212 (35%), Gaps = 19/212 (8%)
Query: 17 FMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFRE---FEQLFWSGQSLETVC 73
F G+ + I +L ++ +++ + ++ + + L
Sbjct: 8 FQDGGVFMYIIAGVLL----WGLAIALERYIFLTRHTGSNKKVWSYLEPLLKAGDLSKA- 62
Query: 74 KSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLS 133
+ + N ++ I ++ + D I+ M+ + ++ ++
Sbjct: 63 RQAADQTNSEVSRIIAYGLNRQANGRRR---------DDIEIAMEEGLMEVTPQLEKRTQ 113
Query: 134 FLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV--SIPGIIESLISILLGLCVSIP 191
++ ++++ L+G+LG ++G++ F ++A I ++ + GL IP
Sbjct: 114 YIATLANIATLLGLLGTIMGLIAAFTAVANANPAEKADLLSQSISVAMNTTAFGLMTGIP 173
Query: 192 SSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
+ + + + +E + + ++
Sbjct: 174 LLLIHYFISTKTAEVVEGLEMVSVKTLNAITE 205
>gi|62550951|emb|CAI79306.1| TolR protein [Aeromonas caviae]
Length = 108
Score = 79.5 bits (195), Expect = 3e-13, Method: Composition-based stats.
Identities = 22/93 (23%), Positives = 49/93 (52%), Gaps = 1/93 (1%)
Query: 103 ARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA 162
P + ++ +D AI +E + + + +++ ++G+LG V+GM+ FQ+I
Sbjct: 12 GTDPELSMETLELRLDEAIPQETPRMESGIGMVKVIAAIAPMLGLLGTVVGMIATFQAIT 71
Query: 163 GYYSNN-VVSIPGIIESLISILLGLCVSIPSSI 194
+ + + + GI E+L++ + GL V++P
Sbjct: 72 LFGTGDPKLMAGGISEALVTTMQGLVVAVPMLF 104
>gi|304383432|ref|ZP_07365897.1| MotA/TolQ/ExbB proton channel family protein [Prevotella marshii
DSM 16973]
gi|304335446|gb|EFM01711.1| MotA/TolQ/ExbB proton channel family protein [Prevotella marshii
DSM 16973]
Length = 276
Score = 79.5 bits (195), Expect = 4e-13, Method: Composition-based stats.
Identities = 43/208 (20%), Positives = 87/208 (41%), Gaps = 9/208 (4%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITL--RRQFREFEQLFWSG 66
+ I+ + G+ V I TLL LS I++ + + R +F + +
Sbjct: 55 HPLDIWGTIYKGGIVVPVIQTLLLTVVALS----IERWLALRSAFGRESLTKFVRSIKAA 110
Query: 67 QSLETVC--KSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARE 124
+ + + L + +A + ++++ +K +I + + A E
Sbjct: 111 LNAKDFAKAQQLCDKQRGSVANVVSASLNAYKAMEAVTGIKKAQKIAKIQQAHEEATQLE 170
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI-AGYYSNNVVSIPGIIESLISIL 183
+ + L L ++ + G L G+LG V GM+ FQ++ AG +++ GI E+LI+
Sbjct: 171 MPTLQMNLPILATLVTLGTLTGLLGTVTGMIKSFQALAAGGGGDSLQLSAGISEALINTA 230
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQME 211
G+ S + I+Y F K ++
Sbjct: 231 FGISTSWLAVISYGFFTNKIDKLTYALD 258
>gi|288802335|ref|ZP_06407775.1| MotA/TolQ/ExbB proton channel family protein [Prevotella
melaninogenica D18]
gi|288335302|gb|EFC73737.1| MotA/TolQ/ExbB proton channel family protein [Prevotella
melaninogenica D18]
Length = 277
Score = 79.5 bits (195), Expect = 4e-13, Method: Composition-based stats.
Identities = 31/185 (16%), Positives = 65/185 (35%), Gaps = 16/185 (8%)
Query: 43 IQKSVNFITLRRQFREFEQLFWS---GQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSC 99
I++ + + F +E K+L +A+I + S
Sbjct: 96 IERIIYLSLSEIDAKRFVGKLDDMIVAGEIEQA-KALSRDTRGPVASICYQGLLRIDDS- 153
Query: 100 DKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQ 159
+ I+R + + + + + S++ + +G LG V+GM+ F
Sbjct: 154 ----------IENIERSVTSYGSVQSANLEKGCSWITLFIAMAPSLGFLGTVIGMVMAFD 203
Query: 160 SIAGYYS-NNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFS 218
I + + G+ +LI+ + G+ V++ I YN + QME A
Sbjct: 204 QIQEAGDISPTIVASGMKVALITTIFGIIVALVLQIFYNYILSKIDHITAQMEESAITLL 263
Query: 219 AILSR 223
+ +
Sbjct: 264 DAIMK 268
>gi|322421501|ref|YP_004200724.1| MotA/TolQ/ExbB proton channel [Geobacter sp. M18]
gi|320127888|gb|ADW15448.1| MotA/TolQ/ExbB proton channel [Geobacter sp. M18]
Length = 211
Score = 79.5 bits (195), Expect = 4e-13, Method: Composition-based stats.
Identities = 25/199 (12%), Positives = 81/199 (40%), Gaps = 17/199 (8%)
Query: 29 TLLFIFSILSWSVIIQKSVNFITLRRQFREFEQL---FWSGQSLETVCKSLKNHHNIGLA 85
LL + ++ +++ ++ +R++ + + + + + L N +A
Sbjct: 18 ILLVLA--AGLAISVERWIHLNRVRKENTQLWEEVHPVLAEGDFDRA-RELVNQDESAIA 74
Query: 86 AIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLV 145
+ ++ + + ++ I+ M+ ++ + ++ ++ +L +S+ L
Sbjct: 75 QMLSMGLAR---------QGAVRRREDIEIAMEESLMEIIPQLEKRTPYLALLSNIATLF 125
Query: 146 GILGAVLGMMGFFQSIAGYYSNNVVS--IPGIIESLISILLGLCVSIPSSIAYNKFIEDS 203
G+LG ++G++ F ++A + I E++ GL +IP + + + +
Sbjct: 126 GLLGTIMGLITAFTAVASASPAEKAALLAASISEAMNCTAFGLMSAIPLLLIHARLTSTT 185
Query: 204 KKFAMQMEGFANEFSAILS 222
+ +E + + +S
Sbjct: 186 GQIVGSLEMVSVKALNSIS 204
>gi|220907826|ref|YP_002483137.1| MotA/TolQ/ExbB proton channel [Cyanothece sp. PCC 7425]
gi|219864437|gb|ACL44776.1| MotA/TolQ/ExbB proton channel [Cyanothece sp. PCC 7425]
Length = 216
Score = 79.5 bits (195), Expect = 4e-13, Method: Composition-based stats.
Identities = 47/213 (22%), Positives = 95/213 (44%), Gaps = 21/213 (9%)
Query: 16 LFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG--QSLETVC 73
LF G+ ++ L FSIL+ ++I+++ V ++ + ++ + + Q L
Sbjct: 6 LFAAGGI----VMWPLLGFSILAIALIMERVVFWLRINQRQPRIVRTVLAVYRQDLGDAL 61
Query: 74 KSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLS 133
LK + ++ +A IF++A+ + ++ A+ EL + +
Sbjct: 62 DRLKKNVDLPIARIFLNALE-----------IDQAKPEEFRLALETAVQAELPLLKRFST 110
Query: 134 FLGSMSSAGLLVGILGAVLGMMGFFQS--IAGYYSNN-VVSIPGIIESLISILLGLCVSI 190
++ + L+G+LG VLG+M F S I S+N GI E+L+S GL V+I
Sbjct: 111 IFETIIALSPLLGLLGTVLGLMTTFASLNIGDIGSSNRTGVTGGISEALVSTAAGLIVAI 170
Query: 191 PSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
+ + N F + ++ ++ + +L R
Sbjct: 171 FTLLFANMFRGMYLRQTALIQEYSGQL-ELLHR 202
>gi|182415714|ref|YP_001820780.1| MotA/TolQ/ExbB proton channel [Opitutus terrae PB90-1]
gi|177842928|gb|ACB77180.1| MotA/TolQ/ExbB proton channel [Opitutus terrae PB90-1]
Length = 196
Score = 79.5 bits (195), Expect = 4e-13, Method: Composition-based stats.
Identities = 38/221 (17%), Positives = 87/221 (39%), Gaps = 33/221 (14%)
Query: 6 LAIMD-ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFW 64
LAI + +++ + G+ I L + S++ ++ ++S +
Sbjct: 3 LAITEVLNVANVIKGAGVL----IWPLLLCSLVMVFIVCERSYALRRAAVMPEDLVDAVV 58
Query: 65 SGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARE 124
G+ L + H + L+ I A +E K+ + ++ ++
Sbjct: 59 GGRPL------IGGKHTV-LSRIV--AFAEQHKNDEDAVKAFARLE-------------- 95
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYS--NNVVSIPGIIESLISI 182
+ + + +L + +A L+G+ G V G++ F I+ + V G+ +L +
Sbjct: 96 INRMERGVPYLDVIYAAAPLIGLTGTVTGLLQVFSQISPETGLPDPVAFTQGVALALSAT 155
Query: 183 LLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
++GL ++IPS + + +A Q++ IL R
Sbjct: 156 VIGLVIAIPSLVGSGYLQRRIENYAAQLDVL---LERILQR 193
>gi|90407977|ref|ZP_01216150.1| TonB system biopolymer transport component [Psychromonas sp. CNPT3]
gi|90310915|gb|EAS39027.1| TonB system biopolymer transport component [Psychromonas sp. CNPT3]
Length = 429
Score = 79.5 bits (195), Expect = 4e-13, Method: Composition-based stats.
Identities = 27/109 (24%), Positives = 51/109 (46%), Gaps = 1/109 (0%)
Query: 119 VAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV-SIPGIIE 177
AI +E+ I + +S L ++S L+G+LG V GM+ F+ I +++ GI +
Sbjct: 317 EAILKEVPTIKKGISTLAVIASIPPLLGLLGTVAGMIETFRVITEQGNSDSQLLAGGISQ 376
Query: 178 SLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+L++ LGL V+IP + + S + +E + +
Sbjct: 377 ALLTTELGLMVAIPLLLLHCLLRSKSIRLIEILEQQSAGLLVLRQHDLR 425
>gi|254294881|ref|YP_003060904.1| MotA/TolQ/ExbB proton channel [Hirschia baltica ATCC 49814]
gi|254043412|gb|ACT60207.1| MotA/TolQ/ExbB proton channel [Hirschia baltica ATCC 49814]
Length = 233
Score = 79.1 bits (194), Expect = 4e-13, Method: Composition-based stats.
Identities = 43/205 (20%), Positives = 81/205 (39%), Gaps = 20/205 (9%)
Query: 14 FALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITL----RRQFREFEQLFWSGQSL 69
L + G V LL + SI++ ++II K + F+ L QL+ G
Sbjct: 18 LDLMITGGPVV----WLLIVLSIIALTIIIYKLIQFVLLGIGKTEHIERAIQLYRDGNKT 73
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
E + +A +G P + + ++ + + +
Sbjct: 74 EALAAVQGAKDPTSIAVATAI----------RGNMRPDASDEIVREEVERVASLGIYGLK 123
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGLC 187
++S L + S L+G+LG V+GM+ F+++ AG + + GI +L++ GL
Sbjct: 124 SQISILDLIGSLSPLLGLLGTVMGMIQAFRAMEAAGRNVDPAILSGGIWAALLTTAAGLI 183
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEG 212
V+IP + F + A + E
Sbjct: 184 VAIPVVAVSSWFERAIQHTAHRTED 208
>gi|212693603|ref|ZP_03301731.1| hypothetical protein BACDOR_03120 [Bacteroides dorei DSM 17855]
gi|237708762|ref|ZP_04539243.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
gi|237724203|ref|ZP_04554684.1| conserved hypothetical protein [Bacteroides sp. D4]
gi|265755971|ref|ZP_06090438.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
gi|212663856|gb|EEB24430.1| hypothetical protein BACDOR_03120 [Bacteroides dorei DSM 17855]
gi|229437391|gb|EEO47468.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4]
gi|229457188|gb|EEO62909.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
gi|263234049|gb|EEZ19650.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
Length = 257
Score = 79.1 bits (194), Expect = 4e-13, Method: Composition-based stats.
Identities = 33/201 (16%), Positives = 75/201 (37%), Gaps = 18/201 (8%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITL----RRQFREFEQLFWSGQSLETVCKSLKNHHNIG 83
++L+ I +L + I++ + ++ E G K++ +
Sbjct: 63 MSLVAIALVLGLAFCIERIIYLSLAEVNTKKLMTSIEAALEKGDV--EAAKTVCRNTRGP 120
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
+A+I C +G D ++R + + + + S++ +
Sbjct: 121 VASI-----------CYQGLMRIDDGVDVVERSVVSYGGVQAGYLEKGCSWITLFIAMAP 169
Query: 144 LVGILGAVLGMMGFFQSIAGYYS-NNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIED 202
+G LG V+GM+ F I + V G+ +LI+ + GL V++ + YN +
Sbjct: 170 SLGFLGTVIGMVMAFDKIQQAGDISPTVVAGGMKVALITTIFGLVVALILQVFYNYILSK 229
Query: 203 SKKFAMQMEGFANEFSAILSR 223
+ ME + ++ +
Sbjct: 230 IEALTSAMEDSSITLLDMIMK 250
>gi|313202922|ref|YP_004041579.1| mota/tolq/exbb proton channel [Paludibacter propionicigenes WB4]
gi|312442238|gb|ADQ78594.1| MotA/TolQ/ExbB proton channel [Paludibacter propionicigenes WB4]
Length = 236
Score = 79.1 bits (194), Expect = 4e-13, Method: Composition-based stats.
Identities = 37/212 (17%), Positives = 87/212 (41%), Gaps = 22/212 (10%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQ----FREFEQLFWSGQ 67
+ F L ++ G ++ L + ++S V I++ V+ L + ++ G+
Sbjct: 30 NYFLLLLKGGW----VLLPLSVLFVMSNYVFIERWVSINILGKVDATWVARVNEMVAEGK 85
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
++ K + A + + + + I +QD + I+
Sbjct: 86 -IDKAIKFCNERQTV-YAKVLAAGL-------ESAHGEDIEVQDALQSEARQQISI---- 132
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISILLGL 186
+ + ++ LG +S ++G LG + G++ F +I+ N+ +I G+ + +IS GL
Sbjct: 133 LEKSMNVLGISASIAPMMGFLGTIFGVIKIFYNISVTNDLNIANISDGLYQKMISSGAGL 192
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFS 218
V I + Y K ++++ ++N+
Sbjct: 193 FVGIIAYAGYYILNGRIDKVVVRIDKYSNDLL 224
>gi|186681275|ref|YP_001864471.1| MotA/TolQ/ExbB proton channel [Nostoc punctiforme PCC 73102]
gi|186463727|gb|ACC79528.1| MotA/TolQ/ExbB proton channel [Nostoc punctiforme PCC 73102]
Length = 217
Score = 79.1 bits (194), Expect = 4e-13, Method: Composition-based stats.
Identities = 42/222 (18%), Positives = 90/222 (40%), Gaps = 21/222 (9%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+ I LF G+ ++ L FS+L ++II++ ++ + ++ + + L+
Sbjct: 1 MGIQNLFAAGGV----VMWPLLAFSVLGVALIIERIRFWVRINQRQNRVVRDVLNLYRLD 56
Query: 71 T---VCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
L+ + ++ LA IF++A + ++ E+
Sbjct: 57 NVVGAMDKLQKNADLPLARIFLAA-----------LELEEPNPEEFRLALESESQAEIPV 105
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGY---YSNNVVSIPGIIESLISILL 184
+ + ++ S L+G+LG VLG++ F S+ S GI E+L+S
Sbjct: 106 LKRFQNIFETIISLAPLLGLLGTVLGLIASFASLNLGDVGGSKTTNVTAGISEALVSTAS 165
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
GL V+I + N F ++ ++ + + + R+ E
Sbjct: 166 GLIVAIFILMFANTFRGLYQRQIALIQEYGGQLELLYRRRYE 207
>gi|297521622|ref|ZP_06940008.1| biopolymer transport protein ExbB [Escherichia coli OP50]
Length = 100
Score = 79.1 bits (194), Expect = 4e-13, Method: Composition-based stats.
Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Query: 147 ILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKK 205
+ G V G+M F IA + N+ V PGI E+L++ +GL +IP+ + YN F
Sbjct: 1 MFGTVWGIMNSFIGIAQTQTTNLAVVAPGIAEALLATAIGLVAAIPAVVIYNVFARQIGG 60
Query: 206 FAMQMEGFANEFSAILSRQTEGNIS 230
F + A + + SR + S
Sbjct: 61 FKAMLGDVAAQVLLLQSRDLDLEAS 85
>gi|297568822|ref|YP_003690166.1| tonB-system energizer ExbB [Desulfurivibrio alkaliphilus AHT2]
gi|296924737|gb|ADH85547.1| tonB-system energizer ExbB [Desulfurivibrio alkaliphilus AHT2]
Length = 140
Score = 79.1 bits (194), Expect = 4e-13, Method: Composition-based stats.
Identities = 24/86 (27%), Positives = 38/86 (44%), Gaps = 1/86 (1%)
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLG 185
E+T L +G++ +G+LG VLG+M F + + + G+ +L G
Sbjct: 51 ELTGNLHLIGTVGRNAPYLGLLGTVLGIMLTFYDMGASGRMDAGQIMVGLSLALKVTAAG 110
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQME 211
L V+IP+ AYN K E
Sbjct: 111 LLVAIPAVTAYNLLQRRVKVLVTNWE 136
>gi|257460673|ref|ZP_05625774.1| TonB-system energizer ExbB [Campylobacter gracilis RM3268]
gi|257442004|gb|EEV17146.1| TonB-system energizer ExbB [Campylobacter gracilis RM3268]
Length = 142
Score = 79.1 bits (194), Expect = 4e-13, Method: Composition-based stats.
Identities = 22/87 (25%), Positives = 43/87 (49%), Gaps = 1/87 (1%)
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA-GYYSNNVVSIPGIIESLISILL 184
E +T+ L+ L + S +G+LG V+G+M F ++ + + G+ +L +
Sbjct: 53 EALTKNLTTLYIVYSNAPYIGLLGTVIGIMITFFDMSTASGIDTKAIMQGLSLALKATAT 112
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQME 211
GL V++P+ I YN F+ + +
Sbjct: 113 GLVVAVPTLIIYNGFVRKVDVLLNRYD 139
>gi|325856066|ref|ZP_08171955.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Prevotella denticola CRIS 18C-A]
gi|325483738|gb|EGC86702.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Prevotella denticola CRIS 18C-A]
Length = 272
Score = 79.1 bits (194), Expect = 5e-13, Method: Composition-based stats.
Identities = 30/185 (16%), Positives = 67/185 (36%), Gaps = 16/185 (8%)
Query: 43 IQKSVNFITLRRQFREFEQLFW---SGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSC 99
I++ + + F + +E K+L +A+I + S
Sbjct: 90 IERIIYLSLSEIDAKRFVGRLEDMIAAGDIEQA-KTLSRDTRGPVASICYQGLLRIDDS- 147
Query: 100 DKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQ 159
+ I+R + + + + + S++ + +G LG V+GM+ F
Sbjct: 148 ----------IENIERSVTSYGSVQSANLEKGCSWITLFIAMAPSLGFLGTVIGMVMAFD 197
Query: 160 SIAGYYS-NNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFS 218
I + + G+ +LI+ + G+ V++ + YN + + QME A
Sbjct: 198 QIQEAGDISPTIVAAGMKVALITTIFGIIVALVLQVFYNYILSKIEHITAQMEESAISLL 257
Query: 219 AILSR 223
+ +
Sbjct: 258 DAIMK 262
>gi|288818978|ref|YP_003433326.1| biopolymer transport protein [Hydrogenobacter thermophilus TK-6]
gi|288788378|dbj|BAI70125.1| biopolymer transport protein [Hydrogenobacter thermophilus TK-6]
gi|308752563|gb|ADO46046.1| tonB-system energizer ExbB [Hydrogenobacter thermophilus TK-6]
Length = 141
Score = 79.1 bits (194), Expect = 5e-13, Method: Composition-based stats.
Identities = 22/80 (27%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYY-SNNVVSIPGIIESLISILLG 185
E+T+ + ++ ++ S +G+LG VLG+M F +I + + G+ +L + +G
Sbjct: 51 ELTKNMHWIATIGSNAPYIGLLGTVLGIMLTFYTIGQEGFVDTKKVMVGLALALKATAVG 110
Query: 186 LCVSIPSSIAYNKFIEDSKK 205
L V+IPS+ YN + ++
Sbjct: 111 LLVAIPSTALYNVLLRRVRE 130
>gi|148265111|ref|YP_001231817.1| MotA/TolQ/ExbB proton channel [Geobacter uraniireducens Rf4]
gi|146398611|gb|ABQ27244.1| outer membrane transport energization protein ExbB [Geobacter
uraniireducens Rf4]
Length = 211
Score = 79.1 bits (194), Expect = 5e-13, Method: Composition-based stats.
Identities = 23/199 (11%), Positives = 78/199 (39%), Gaps = 17/199 (8%)
Query: 29 TLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG---QSLETVCKSLKNHHNIGLA 85
LL + + ++ +++ ++ ++ + + + + N L+
Sbjct: 18 ILLVLA--VGIAIAVERWIHLKRVKAENSRIWDEVHPVLVEGDFDKA-REMVNEDKSALS 74
Query: 86 AIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLV 145
+ ++ + + ++ I+ M+ ++ + ++ ++ +L +S+ L
Sbjct: 75 QMLAMGLAR---------QGAVRRREDIEIAMEESMMEIVPQLEKRTPYLALLSNIATLF 125
Query: 146 GILGAVLGMMGFFQSIAGYYSNNVVS--IPGIIESLISILLGLCVSIPSSIAYNKFIEDS 203
G+LG ++G++ F ++A + I E++ GL +IP + + + +
Sbjct: 126 GLLGTIMGLITAFAAVANASPAEKAALLAASISEAMNCTAFGLMTAIPLLLLHARLTTTT 185
Query: 204 KKFAMQMEGFANEFSAILS 222
+ +E + + +S
Sbjct: 186 GQIVNSLEMVSVKALNTIS 204
>gi|313681979|ref|YP_004059717.1| outer membrane transport energization protein exbb [Sulfuricurvum
kujiense DSM 16994]
gi|313154839|gb|ADR33517.1| outer membrane transport energization protein ExbB [Sulfuricurvum
kujiense DSM 16994]
Length = 140
Score = 79.1 bits (194), Expect = 5e-13, Method: Composition-based stats.
Identities = 25/87 (28%), Positives = 41/87 (47%), Gaps = 1/87 (1%)
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSN-NVVSIPGIIESLISILLG 185
E+T+ L+ + + S VG+LG V G+M F I V + G+ +L + LG
Sbjct: 51 ELTKNLTTISVIGSNAPYVGLLGTVSGIMVVFYEIGQSGGMEPSVVVIGLSLALKATALG 110
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEG 212
L V+IPS + Y+ + + E
Sbjct: 111 LLVAIPSMMIYSACLRKVDLLMGKFED 137
>gi|320104145|ref|YP_004179736.1| MotA/TolQ/ExbB proton channel [Isosphaera pallida ATCC 43644]
gi|319751427|gb|ADV63187.1| MotA/TolQ/ExbB proton channel [Isosphaera pallida ATCC 43644]
Length = 292
Score = 79.1 bits (194), Expect = 5e-13, Method: Composition-based stats.
Identities = 23/124 (18%), Positives = 54/124 (43%), Gaps = 3/124 (2%)
Query: 95 WKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGM 154
+ + G + + M+ + E+ K+S+L + + G ++G++G +LGM
Sbjct: 148 YARLVRSGVANLPQGKTEAKEAMEFVSNEVVTEMEAKISYLAVIGTLGPMIGLVGTILGM 207
Query: 155 MGFFQSIAGYYSNNV---VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
+ F+ +A + GI+E+L L G+ +++P+ + F + ++
Sbjct: 208 ISAFRELATSVTAQPKPYKVAEGIMEALFLTLEGVALAVPAIFFFAMFRNRIARVTVEAN 267
Query: 212 GFAN 215
A
Sbjct: 268 KSAE 271
>gi|154148544|ref|YP_001406442.1| TonB-system energizer ExbB [Campylobacter hominis ATCC BAA-381]
gi|153804553|gb|ABS51560.1| TonB-system energizer ExbB [Campylobacter hominis ATCC BAA-381]
Length = 140
Score = 78.7 bits (193), Expect = 5e-13, Method: Composition-based stats.
Identities = 26/90 (28%), Positives = 48/90 (53%), Gaps = 1/90 (1%)
Query: 121 IARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVS-IPGIIESL 179
I +++T+ L+ L + S VG+LG V G+M F + + + S + G+ +L
Sbjct: 45 IETYEKDLTKNLTTLYIIYSNAPYVGLLGTVTGIMITFYDMGLSGNMDAKSIMLGLSLAL 104
Query: 180 ISILLGLCVSIPSSIAYNKFIEDSKKFAMQ 209
+ LGLCV+IP+ + YN F+ + ++
Sbjct: 105 KATALGLCVAIPTLMIYNAFLRKVEVLLVE 134
>gi|157164375|ref|YP_001467239.1| TonB-system energizer ExbB [Campylobacter concisus 13826]
gi|112801936|gb|EAT99280.1| TonB-system energizer ExbB [Campylobacter concisus 13826]
Length = 142
Score = 78.7 bits (193), Expect = 5e-13, Method: Composition-based stats.
Identities = 23/88 (26%), Positives = 42/88 (47%), Gaps = 1/88 (1%)
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVS-IPGIIESLISILL 184
E +T+ L+ L + S +G+LG V G+M F + + S + G+ +L +
Sbjct: 50 EALTKNLTTLYIIYSNAPYIGLLGTVAGIMITFYDMGMAGGIDTKSIMIGLSLALKATAF 109
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEG 212
GL V+IP+ + YN F+ + +
Sbjct: 110 GLLVAIPTLMIYNGFVRKVDVMINRYKA 137
>gi|301057360|ref|ZP_07198478.1| transporter, MotA/TolQ/ExbB proton channel family protein [delta
proteobacterium NaphS2]
gi|300448590|gb|EFK12237.1| transporter, MotA/TolQ/ExbB proton channel family protein [delta
proteobacterium NaphS2]
Length = 159
Score = 78.7 bits (193), Expect = 5e-13, Method: Composition-based stats.
Identities = 25/110 (22%), Positives = 51/110 (46%), Gaps = 1/110 (0%)
Query: 118 DVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVS-IPGII 176
+ A+ R++ + + +S + +++ L+G+LG V GM+ F+ I + N + GI
Sbjct: 38 ETAVHRQVFPLNQHMSAILVLAAVAPLLGLLGTVTGMVDTFRVIGVAGTGNPQALASGIE 97
Query: 177 ESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
E+LI+ GL ++IP + + + + F L R +
Sbjct: 98 EALITTQTGLLIAIPGLLVGQTLRKQIRNIRGDLMVFYRAVDQWLERDQK 147
>gi|126736874|ref|ZP_01752609.1| MotA/TolQ/ExbB proton channel [Roseobacter sp. SK209-2-6]
gi|126721459|gb|EBA18162.1| MotA/TolQ/ExbB proton channel [Roseobacter sp. SK209-2-6]
Length = 227
Score = 78.7 bits (193), Expect = 5e-13, Method: Composition-based stats.
Identities = 32/177 (18%), Positives = 67/177 (37%), Gaps = 21/177 (11%)
Query: 35 SILSWSVIIQKSVNFITLR----RQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMS 90
SIL+ S+++ K + R +Q + + G S + L +
Sbjct: 26 SILTTSLVLYKIWQYQVARVGNHKQLSQAVAAWDRGDS--QGALAAVAQSRSYLVPVLHM 83
Query: 91 AMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGA 150
A++ + +R+ D + L L ++ L+G+ G
Sbjct: 84 ALTAPQD-------------ERLAARADAEAEARFARLERGLGALDMVAQLAPLMGLFGT 130
Query: 151 VLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKK 205
V+GM+ FQ + AG + + GI +L++ GL V++P+++ ++
Sbjct: 131 VIGMIEAFQKLQSAGSSVDPSLLAGGIWVALLTTAAGLAVAMPAALVLGWLTARMQQ 187
>gi|78777200|ref|YP_393515.1| MotA/TolQ/ExbB proton channel [Sulfurimonas denitrificans DSM 1251]
gi|78497740|gb|ABB44280.1| MotA/TolQ/ExbB proton channel [Sulfurimonas denitrificans DSM 1251]
Length = 143
Score = 78.7 bits (193), Expect = 6e-13, Method: Composition-based stats.
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSN-NVVSIPGIIESLISILLGL 186
+T LS + S++S VG+LG V+G+M F + S V + G+ +L + LGL
Sbjct: 52 LTNNLSTISSIASNAPYVGLLGTVMGIMVVFYDMGQNSSLETSVVVIGLSLALKATALGL 111
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEG 212
V+IPS + Y+ F+ + + E
Sbjct: 112 LVAIPSMMLYSAFLRKTDILFAKWED 137
>gi|149198900|ref|ZP_01875942.1| MotA/TolQ/ExbB proton channel [Lentisphaera araneosa HTCC2155]
gi|149138098|gb|EDM26509.1| MotA/TolQ/ExbB proton channel [Lentisphaera araneosa HTCC2155]
Length = 209
Score = 78.7 bits (193), Expect = 6e-13, Method: Composition-based stats.
Identities = 37/205 (18%), Positives = 79/205 (38%), Gaps = 21/205 (10%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITL----RRQFREFEQLFWSGQ 67
++ ++ + G L+ S +SW +++ +E L G+
Sbjct: 6 TVIDMWSEAGWFA----LALWFLSFISWIYLLKLHQKLTRTWFNTSHLSKEITHLLLDGK 61
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ E + L + I I +++R + A E+
Sbjct: 62 NKEDIRLWLGKKKGVIPKVI--------NYVLATNDHRKITLKERYEE----ASITEINS 109
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLC 187
I ++ L ++ + L+G+LG V GM+ F +++ VS GI ++L++ LGL
Sbjct: 110 IHKEFGVLNALVKSAPLLGLLGTVAGMIQTFAALSQSGDITHVS-QGISKALLTTQLGLL 168
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEG 212
+++P A + +M++E
Sbjct: 169 IALPGVFASAYLKRKFLRLSMELER 193
>gi|237750493|ref|ZP_04580973.1| TonB transporter [Helicobacter bilis ATCC 43879]
gi|229374023|gb|EEO24414.1| TonB transporter [Helicobacter bilis ATCC 43879]
Length = 144
Score = 78.7 bits (193), Expect = 6e-13, Method: Composition-based stats.
Identities = 27/85 (31%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISILL 184
E++++ L+ L + S VG+LG V+G+M F + G + +V SI G+ +L + L
Sbjct: 50 EDVSKNLTLLYIVYSNAPYVGLLGTVVGIMIVFYDMGGSGNIDVKSITLGLSMALKATAL 109
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQ 209
GL V+IP+ + YN F+ + +
Sbjct: 110 GLVVAIPTLMIYNAFLRVADTKVNR 134
>gi|229496973|ref|ZP_04390678.1| MotA/TolQ/ExbB proton channel family protein [Porphyromonas
endodontalis ATCC 35406]
gi|229316075|gb|EEN82003.1| MotA/TolQ/ExbB proton channel family protein [Porphyromonas
endodontalis ATCC 35406]
Length = 276
Score = 78.7 bits (193), Expect = 6e-13, Method: Composition-based stats.
Identities = 28/169 (16%), Positives = 61/169 (36%), Gaps = 14/169 (8%)
Query: 54 RQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRI 113
+ + E G K + +A+I + + D +
Sbjct: 114 KLLKGIEDALARGDV--EGAKKIARETRGPVASIAYQGLMRMDQGIDI-----------V 160
Query: 114 DRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYS-NNVVSI 172
+R + + + + LS++ + +G LG V+GM+ F I + V
Sbjct: 161 ERSITSYGGVQGGLLEKNLSWITLFIAMAPSLGFLGTVVGMVMAFDKIEKVGDISPTVVA 220
Query: 173 PGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
G+ +LI+ + GL V++ + YN + + +ME + ++
Sbjct: 221 GGMKVALITTIFGLIVALILQLFYNYILSKVEAILNKMEDASISLLDLV 269
>gi|217033100|ref|ZP_03438564.1| hypothetical protein HPB128_27g7 [Helicobacter pylori B128]
gi|298735589|ref|YP_003728112.1| biopolymer transport protein ExbB [Helicobacter pylori B8]
gi|216945173|gb|EEC23864.1| hypothetical protein HPB128_27g7 [Helicobacter pylori B128]
gi|298354776|emb|CBI65648.1| biopolymer transport protein ExbB [Helicobacter pylori B8]
Length = 150
Score = 78.7 bits (193), Expect = 6e-13, Method: Composition-based stats.
Identities = 19/89 (21%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI-AGYYSNNVVSIPGIIESLISILLGL 186
+ ++L+ + ++ S +G+LG V+G+M F + + + + + +L + +GL
Sbjct: 49 LHKRLTLVVTIGSNAPYIGLLGTVMGIMLTFMDLGSASGIDTKAIMTNLALALKATGMGL 108
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFAN 215
V+IP+ + YN + S+ + + F +
Sbjct: 109 LVAIPAIVIYNLLVRKSEILVTKWDIFHH 137
>gi|320538134|ref|ZP_08038029.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Treponema phagedenis F0421]
gi|320144951|gb|EFW36672.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Treponema phagedenis F0421]
Length = 212
Score = 78.7 bits (193), Expect = 6e-13, Method: Composition-based stats.
Identities = 25/122 (20%), Positives = 48/122 (39%), Gaps = 2/122 (1%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA--GYYSNN 168
+ + L + L +++ L+G+LG V G+M FQ IA G +
Sbjct: 87 QYTAEAFERTVQYILTLQEKGFILLSRIAAVAPLLGLLGTVTGLMAAFQKIAVLGGSVDI 146
Query: 169 VVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
+ GI E++I+ GL +I + Y F + + ME + + + +
Sbjct: 147 AILSSGIWEAMITTATGLVTAIFAFAFYEFFDWLNTQRVRDMEQLVSVLMSYQQQLLQAG 206
Query: 229 IS 230
+
Sbjct: 207 ST 208
>gi|170698203|ref|ZP_02889281.1| MotA/TolQ/ExbB proton channel [Burkholderia ambifaria IOP40-10]
gi|170136880|gb|EDT05130.1| MotA/TolQ/ExbB proton channel [Burkholderia ambifaria IOP40-10]
Length = 203
Score = 78.7 bits (193), Expect = 7e-13, Method: Composition-based stats.
Identities = 39/198 (19%), Positives = 75/198 (37%), Gaps = 19/198 (9%)
Query: 17 FMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFW--SGQSLETVCK 74
MGL L S +I+++ + F + + E +L K
Sbjct: 10 VQSMGLIPLLAFIFLLGIS-----IIVERFIFFSRAVKAGKTLEHDLKMVEPANLGDAQK 64
Query: 75 SLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSF 134
+++ E KS K P + ++R ++ I ++ + L
Sbjct: 65 VAEHYKQT--------VQGELVKSALKVQGKPEAV---VERELEETIMFQMPRLDRNLWI 113
Query: 135 LGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSS 193
L + + G L+G+LG ++GM+ F + ++N GI +L + GL ++I
Sbjct: 114 LDTAVTLGPLLGLLGTIIGMVESFNVLGASGTSNPNGVTGGIGHALTATACGLTIAIICV 173
Query: 194 IAYNKFIEDSKKFAMQME 211
I N F + + A Q +
Sbjct: 174 IFLNYFNKRIRMTANQFD 191
>gi|302036022|ref|YP_003796344.1| biopolymer transport protein Exbb [Candidatus Nitrospira defluvii]
gi|300604086|emb|CBK40418.1| Biopolymer transport protein exbB [Candidatus Nitrospira defluvii]
Length = 141
Score = 78.3 bits (192), Expect = 7e-13, Method: Composition-based stats.
Identities = 21/86 (24%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVS-IPGIIESLISILLGL 186
+T +L +G++++ +G+LG VLG+M F ++ + V + + G+ +L + GL
Sbjct: 52 LTRRLVVIGTVAANAPYIGLLGTVLGIMLTFHTMGTSGALAVTTIMIGLSLALKATAAGL 111
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEG 212
V+IP + N + Q +
Sbjct: 112 VVAIPCVVMNNVLRRRVSELLAQYKA 137
>gi|260428635|ref|ZP_05782614.1| MotA/TolQ/ExbB proton channel [Citreicella sp. SE45]
gi|260423127|gb|EEX16378.1| MotA/TolQ/ExbB proton channel [Citreicella sp. SE45]
Length = 218
Score = 78.3 bits (192), Expect = 7e-13, Method: Composition-based stats.
Identities = 34/170 (20%), Positives = 65/170 (38%), Gaps = 22/170 (12%)
Query: 40 SVIIQKSVNFITL---RRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWK 96
+V++ K F R + W T L + + I ++ +
Sbjct: 32 AVVLYKLWQFQAAGVGRHKALRLAVEAWDKGDRGTAAGELAHSRSYLKPVIALA----FT 87
Query: 97 KSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMG 156
CD G ++ + FL S++ L+G+ G VLGM+
Sbjct: 88 GRCDAG-------------RLEAEAETRFARLESGFRFLDSVAQLSPLLGLFGTVLGMIS 134
Query: 157 FFQSI--AGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSK 204
FQ++ AG + + GI +L++ +GL V++P+S+ + F +
Sbjct: 135 AFQALQDAGSQVDPSILAGGIWVALLTTAVGLAVAMPTSLILSWFESRME 184
>gi|158339991|ref|YP_001521161.1| MotA/TolQ/ExbB proton channel [Acaryochloris marina MBIC11017]
gi|158310232|gb|ABW31847.1| MotA/TolQ/ExbB proton channel [Acaryochloris marina MBIC11017]
Length = 217
Score = 78.3 bits (192), Expect = 7e-13, Method: Composition-based stats.
Identities = 42/212 (19%), Positives = 90/212 (42%), Gaps = 20/212 (9%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQ----FREFEQLFWSGQSLETVCKSLKNHHN 81
++ L +FS+++ ++I ++ + + + R ++ QL+ ++ + L+
Sbjct: 12 VVMLPLMVFSLIAIALIFERLIFWTRVNRNQLRIVKQALQLYRQ-DNVYDALRYLQEQAR 70
Query: 82 IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSA 141
+A IF++A+S P + R+ ++ EL + + ++ S
Sbjct: 71 FPIARIFLAALS---------LEDPTPEEFRL--ALESEAQAELPTLKRFTTVFDTIISI 119
Query: 142 GLLVGILGAVLGMMGFFQSI---AGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNK 198
L+G+LG VLG++ F S+ S + GI +LIS GL V+I + I N
Sbjct: 120 SPLLGLLGTVLGLINSFSSLDVGNIGGSESAEVTGGISTALISTAAGLIVAISTLIFANM 179
Query: 199 FIEDSKKFAMQMEGFANEFSAIL-SRQTEGNI 229
F ++ ++ + + R G +
Sbjct: 180 FRSLYQRQLAFIQEHGGQLELLYRHRYERGRV 211
>gi|95930817|ref|ZP_01313549.1| MotA/TolQ/ExbB proton channel [Desulfuromonas acetoxidans DSM 684]
gi|95133165|gb|EAT14832.1| MotA/TolQ/ExbB proton channel [Desulfuromonas acetoxidans DSM 684]
Length = 213
Score = 78.3 bits (192), Expect = 7e-13, Method: Composition-based stats.
Identities = 40/187 (21%), Positives = 74/187 (39%), Gaps = 20/187 (10%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
D + FA + GL ++ L + S + W ++ ++ V F L EF + S+
Sbjct: 18 DSAPFAYIIHGGL----VMVPLLVISAVMWMLVFERVVAFHRL-----EFRDI-----SM 63
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+ ++ I + + + G +D + L I
Sbjct: 64 IELVHGCRDGRQISGSRGGLR-----SQLGRFFVGQQQGSYPLTRSRLDEYYLKTLPNID 118
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSN-NVVSIPGIIESLISILLGLCV 188
+ + +++ L+G+LG V GM+ F IA + + + GI E+LI+ GL V
Sbjct: 119 RHIDAITTLAMVCPLLGLLGTVSGMITTFDVIALFGTGHSKALAGGISEALITTQGGLLV 178
Query: 189 SIPSSIA 195
+IP A
Sbjct: 179 AIPGMFA 185
>gi|315606451|ref|ZP_07881466.1| MotA/TolQ/ExbB proton channel family protein [Prevotella buccae
ATCC 33574]
gi|315251857|gb|EFU31831.1| MotA/TolQ/ExbB proton channel family protein [Prevotella buccae
ATCC 33574]
Length = 280
Score = 78.3 bits (192), Expect = 7e-13, Method: Composition-based stats.
Identities = 45/212 (21%), Positives = 94/212 (44%), Gaps = 11/212 (5%)
Query: 7 AIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITL--RRQFREFEQLFW 64
A+++ +I+ + G+ V I TLL S++ ++ I++ + T + +F
Sbjct: 55 AVLNSNIWGTIYKGGVVVPVIHTLLL--SVI--ALSIERLLALRTAFGKGSLPKFVANIK 110
Query: 65 SGQSLETV--CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQ--DRIDRMMDVA 120
+ + + L + +A + ++++ +K D S Q +I + + A
Sbjct: 111 AALNANDFKKAQDLCDKQKGSVANVVYASLNAYKAMNDGANASLKKSQKVAKIQQAHEEA 170
Query: 121 IARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-VVSIPGIIESL 179
E+ +T L + ++ + G L G+LG V GM+ F ++A + + GI E+L
Sbjct: 171 TQLEMPTLTMNLPLIATIVTLGTLTGLLGTVTGMIRSFAALAAGGGGDSLALSAGISEAL 230
Query: 180 ISILLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
I+ G+ S + I+YN F K ++
Sbjct: 231 INTAFGIATSWCAVISYNYFTNKIDKLTFALD 262
>gi|288925665|ref|ZP_06419597.1| MotA/TolQ/ExbB proton channel family protein [Prevotella buccae
D17]
gi|288337603|gb|EFC75957.1| MotA/TolQ/ExbB proton channel family protein [Prevotella buccae
D17]
Length = 280
Score = 78.3 bits (192), Expect = 8e-13, Method: Composition-based stats.
Identities = 45/212 (21%), Positives = 94/212 (44%), Gaps = 11/212 (5%)
Query: 7 AIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITL--RRQFREFEQLFW 64
A+++ +I+ + G+ V I TLL S++ ++ I++ + T + +F
Sbjct: 55 AVLNSNIWGTIYKGGVVVPVIHTLLL--SVI--ALSIERLLALRTAFGKGSLPKFVANIK 110
Query: 65 SGQSLETV--CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQ--DRIDRMMDVA 120
+ + + L + +A + ++++ +K D S Q +I + + A
Sbjct: 111 AALNANDFKKAQDLCDKQKGSVANVVYASLNAYKAMNDGANASLKKSQKVAKIQQAHEEA 170
Query: 121 IARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-VVSIPGIIESL 179
E+ +T L + ++ + G L G+LG V GM+ F ++A + + GI E+L
Sbjct: 171 TQLEMPTLTMNLPLIATIVTLGTLTGLLGTVTGMIRSFAALAAGGGGDSLALSAGISEAL 230
Query: 180 ISILLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
I+ G+ S + I+YN F K ++
Sbjct: 231 INTAFGIATSWCAVISYNYFTNKIDKLTFALD 262
>gi|224418537|ref|ZP_03656543.1| TonB system transport protein ExbB [Helicobacter canadensis MIT
98-5491]
gi|253826909|ref|ZP_04869794.1| TonB system transport protein ExbB [Helicobacter canadensis MIT
98-5491]
gi|313142063|ref|ZP_07804256.1| TonB system transport protein ExbB [Helicobacter canadensis MIT
98-5491]
gi|253510315|gb|EES88974.1| TonB system transport protein ExbB [Helicobacter canadensis MIT
98-5491]
gi|313131094|gb|EFR48711.1| TonB system transport protein ExbB [Helicobacter canadensis MIT
98-5491]
Length = 145
Score = 78.3 bits (192), Expect = 8e-13, Method: Composition-based stats.
Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 1/86 (1%)
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILL 184
+ IT+ L+ L + S VG+LG V+G+M F + S + + G+ +L + L
Sbjct: 50 DAITKHLTTLYIIYSNAPYVGLLGTVIGIMITFYDMGMSGSIDTKEIMTGLSLALKATAL 109
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQM 210
GL V+IP+ IAYN +
Sbjct: 110 GLAVAIPTLIAYNALYRKITLLSNLY 135
>gi|254502128|ref|ZP_05114279.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Labrenzia alexandrii DFL-11]
gi|222438199|gb|EEE44878.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Labrenzia alexandrii DFL-11]
Length = 211
Score = 78.3 bits (192), Expect = 8e-13, Method: Composition-based stats.
Identities = 35/199 (17%), Positives = 78/199 (39%), Gaps = 20/199 (10%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITL----RRQFREFEQLFWSGQSLETVCKSLKNHHN 81
+I L S+++ ++I+ K+ F+ L R+ + + W + +
Sbjct: 3 TVIAGL---SVIALALILVKAFEFLVLGVGSSRRAKAGVK-LWLSHRPGDALAVIGAPKS 58
Query: 82 IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSA 141
A+ + + + +S I+ + V +L + + L +++
Sbjct: 59 AADKAVLTA----CRLLESRNGKSE------IEERVGVQATGDLHHFAKGVRALEAIAQV 108
Query: 142 GLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKF 199
L+G+ G VLGM+ FQ++ AG + GI +L++ GL V++P S+
Sbjct: 109 APLIGLFGTVLGMIEAFQALQYAGSNVDPSALAGGIWVALMTTAAGLAVAMPVSLVVTWL 168
Query: 200 IEDSKKFAMQMEGFANEFS 218
+ + +E +
Sbjct: 169 EGRLEAERIAIETLTSALL 187
>gi|296123995|ref|YP_003631773.1| MotA/TolQ/ExbB proton channel [Planctomyces limnophilus DSM 3776]
gi|296016335|gb|ADG69574.1| MotA/TolQ/ExbB proton channel [Planctomyces limnophilus DSM 3776]
Length = 268
Score = 78.3 bits (192), Expect = 8e-13, Method: Composition-based stats.
Identities = 46/197 (23%), Positives = 75/197 (38%), Gaps = 13/197 (6%)
Query: 29 TLLFIFSILSWSVIIQKSVN-FITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAI 87
+LF+ SI ++ K F+ LR Q E L LE + L G+
Sbjct: 71 FVLFVMSIY----LVAKITQLFMRLRPQNIMPEDL------LEEWGEMLNKRDYQGIYRT 120
Query: 88 FMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGI 147
+ SE G S G +D E+ +++S L + S G L+G+
Sbjct: 121 AKESDSELGMLVANGITSLNGGLAEARDSIDRHGELVAVEMEKQISMLAVIGSLGPLIGL 180
Query: 148 LGAVLGMMGFFQSIAGYYSNNVV--SIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKK 205
LG + GM+ F IA + GI E+L+ G+ +S+P+ + F
Sbjct: 181 LGTLKGMIASFSVIAMSETQMKASEVAGGISEALLITFEGVALSVPAIFFFALFRNRVAT 240
Query: 206 FAMQMEGFANEFSAILS 222
++ ANE +
Sbjct: 241 LSLGAVSAANELIRRIQ 257
>gi|323142694|ref|ZP_08077412.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Succinatimonas hippei YIT 12066]
gi|322417535|gb|EFY08151.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Succinatimonas hippei YIT 12066]
Length = 203
Score = 78.3 bits (192), Expect = 8e-13, Method: Composition-based stats.
Identities = 32/134 (23%), Positives = 59/134 (44%), Gaps = 3/134 (2%)
Query: 89 MSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGIL 148
+ + + ++ D I + R + LS L ++ L+G+L
Sbjct: 60 YEGSNPFLRIIKDIVQTHASHSDDIRAEVAYLFNRNFKTAINGLSILKMITVISPLLGLL 119
Query: 149 GAVLGMMGFFQSI-AGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFA 207
G V GM+ F ++ A N V GI ++LI+ ++GL V+IP+ + Y + F
Sbjct: 120 GTVSGMLMVFDAVSAAAAQNPEVLARGIWQALITTVMGLTVAIPTMVIYYFLSLRMRTF- 178
Query: 208 MQMEGFANEFSAIL 221
Q+E + + AI+
Sbjct: 179 -QIEAIEHSYRAIV 191
>gi|255617567|ref|XP_002539856.1| conserved hypothetical protein [Ricinus communis]
gi|223501717|gb|EEF22528.1| conserved hypothetical protein [Ricinus communis]
Length = 121
Score = 78.3 bits (192), Expect = 8e-13, Method: Composition-based stats.
Identities = 26/114 (22%), Positives = 49/114 (42%), Gaps = 2/114 (1%)
Query: 22 LAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCK-SLKNHH 80
L V+ + L +FSI++W +I+ K+V + +Q ++F Q FWS SL+
Sbjct: 8 LIVQGALYGLVLFSIVTWVLILAKAVQHARVGKQDKQFTQKFWSANSLDAATALGSDASP 67
Query: 81 NIGLAAI-FMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLS 133
LA + F + Q+ ++R + I +E + + L+
Sbjct: 68 KSRLANVGFEALYVNDTDGSGSDLEHSWDRQELLERQLRQQIQKEYQSLESGLA 121
>gi|288800727|ref|ZP_06406184.1| MotA/TolQ/ExbB proton channel family protein [Prevotella sp. oral
taxon 299 str. F0039]
gi|288332188|gb|EFC70669.1| MotA/TolQ/ExbB proton channel family protein [Prevotella sp. oral
taxon 299 str. F0039]
Length = 278
Score = 78.3 bits (192), Expect = 8e-13, Method: Composition-based stats.
Identities = 43/215 (20%), Positives = 92/215 (42%), Gaps = 9/215 (4%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITL--RRQFREF 59
N+ A+ + +I L + G V I LL LS +++ + T + +F
Sbjct: 50 NDPTAAVKEGNILGLMYKGGFIVPIIQGLLLTVLALS----VERWLALNTAFGKGSLSKF 105
Query: 60 EQLFWSGQSLETVCKS--LKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMM 117
+ + K+ L N +A + ++++ +K+ + +I +
Sbjct: 106 VANIKAALNANDFAKAQDLCNKQQGSVANVVSASLNAYKEMENTKGLKLSQKVSKIQQAH 165
Query: 118 DVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GII 176
+ A E+ + L + S+ + G L G+LG V+GM+ F ++A + +++ GI
Sbjct: 166 EEATQLEMPTLQMNLPIIASIVTLGTLTGLLGTVIGMIRSFAALAAGGGGDSLALSEGIS 225
Query: 177 ESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
E+L++ G+ S + ++YN F K ++
Sbjct: 226 EALVNTASGIATSWFAVVSYNTFTNKIDKLTYALD 260
>gi|124266421|ref|YP_001020425.1| putative adventurous gliding motility protein R [Methylibium
petroleiphilum PM1]
gi|124259196|gb|ABM94190.1| putative adventurous gliding motility protein R [Methylibium
petroleiphilum PM1]
Length = 217
Score = 77.9 bits (191), Expect = 9e-13, Method: Composition-based stats.
Identities = 31/212 (14%), Positives = 80/212 (37%), Gaps = 19/212 (8%)
Query: 17 FMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFW---SGQSLETVC 73
F G+A+ I ++ I ++ I++ + R Q R+ + V
Sbjct: 11 FQDSGVAIYFSIAIMAI----GLAIAIERYIFLNRARSQNRKLWAQVLPMLQNGRFKEV- 65
Query: 74 KSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLS 133
+ + + + I + + + G ++ ID M+ + + + ++
Sbjct: 66 QGVTEKSDAAIGKIVANGLQRMQ---------SPGRREDIDAAMEEGMMEIVPRLEKRTH 116
Query: 134 FLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV--SIPGIIESLISILLGLCVSIP 191
++ + ++ LVG+LG ++G++ F ++A I ++ + L V+IP
Sbjct: 117 YIATFANVITLVGLLGTIIGLIKGFTAVAAVNPAEKAELLSASISIAMNNTAFALSVAIP 176
Query: 192 SSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
+ + + + +E F ++ R
Sbjct: 177 FLLIHAFLQARTSEIVDGLEAAKISFLNLVQR 208
>gi|189426713|ref|YP_001953889.1| tonB-system energizer ExbB [Geobacter lovleyi SZ]
gi|189422972|gb|ACD97369.1| tonB-system energizer ExbB [Geobacter lovleyi SZ]
Length = 144
Score = 77.9 bits (191), Expect = 9e-13, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV-SIPGIIESLISILLGL 186
+T KL + ++ S +G+LG VLG+M F ++ + + G+ +L + +GL
Sbjct: 52 LTRKLHIIATVGSNAPYIGLLGTVLGIMLTFSTMGQQGFVDATKIMTGLALALKATAIGL 111
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEG 212
V+IP+ YN + +K+ + E
Sbjct: 112 VVAIPAVTIYNILVRQAKETLLAWEA 137
>gi|242310386|ref|ZP_04809541.1| TonB-system energizer ExbB [Helicobacter pullorum MIT 98-5489]
gi|239522784|gb|EEQ62650.1| TonB-system energizer ExbB [Helicobacter pullorum MIT 98-5489]
Length = 142
Score = 77.9 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 1/86 (1%)
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILL 184
+ IT+ L+ L + S VG+LG V+G+M F + + + + G+ +L + L
Sbjct: 50 DSITKNLTTLYIIYSNAPYVGLLGTVIGIMITFYDMGLSGNIDTKEIMTGLSLALKATAL 109
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQM 210
GL V+IP+ IAYN +
Sbjct: 110 GLAVAIPTLIAYNALYRKITLLSNLY 135
>gi|325269494|ref|ZP_08136110.1| MotA/TolQ/ExbB proton channel family protein [Prevotella
multiformis DSM 16608]
gi|324988113|gb|EGC20080.1| MotA/TolQ/ExbB proton channel family protein [Prevotella
multiformis DSM 16608]
Length = 266
Score = 77.9 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 30/185 (16%), Positives = 66/185 (35%), Gaps = 16/185 (8%)
Query: 43 IQKSVNFITLRRQFREFEQLFW---SGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSC 99
I++ + + F + +E K L +A+I + S
Sbjct: 88 IERIIYLSLSEIDAKRFVGRLEDMIAAGEIEQA-KRLSRDTRGPVASICYQGLLRIDDS- 145
Query: 100 DKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQ 159
+ I+R + + + + + S++ + +G LG V+GM+ F
Sbjct: 146 ----------IENIERSVTSYGSVQSANLEKGCSWITLFIAMAPSLGFLGTVIGMVMAFD 195
Query: 160 SIAGYYS-NNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFS 218
I + + G+ +LI+ + G+ V++ + YN + + QME A
Sbjct: 196 QIQEAGDISPTIVAAGMKVALITTIFGIIVALVLQVFYNYILSKIEHITAQMEESAISLL 255
Query: 219 AILSR 223
+ +
Sbjct: 256 DAIMK 260
>gi|78776479|ref|YP_392794.1| MotA/TolQ/ExbB proton channel [Sulfurimonas denitrificans DSM 1251]
gi|78497019|gb|ABB43559.1| MotA/TolQ/ExbB proton channel [Sulfurimonas denitrificans DSM 1251]
Length = 150
Score = 77.9 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
+T ++ + + S +G+LG V G++ F ++ + + + + + +L + +GL
Sbjct: 54 LTNNINIISTFGSNAPYIGLLGTVFGIIITFYAMGQSDNLDAKIIMTSLALALKATAMGL 113
Query: 187 CVSIPSSIAYNKFIEDSKKFAM 208
V+IP+++ YN +
Sbjct: 114 LVAIPATVFYNHLARRIEVVLA 135
>gi|260170937|ref|ZP_05757349.1| putative tolQ-type transport protein [Bacteroides sp. D2]
gi|315919263|ref|ZP_07915503.1| conserved hypothetical protein [Bacteroides sp. D2]
gi|313693138|gb|EFS29973.1| conserved hypothetical protein [Bacteroides sp. D2]
Length = 461
Score = 77.9 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 32/199 (16%), Positives = 74/199 (37%), Gaps = 17/199 (8%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLF---WSGQSLETVCKSLKNHHNIGL 84
+ L++ +++ + IQ+ + R + + + L+ + + + L
Sbjct: 262 MYPLYLLGLIALVIAIQRLITSRQGRLAPKPLCKSVNECLANGDLKGALAACDKYPST-L 320
Query: 85 AAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLL 144
A K + +++ + AR++ ++ L ++S L
Sbjct: 321 ANSLRFIFEHVKAGREAVSQTAGDM-----------AARDIRTHLARIYPLSVIASLAPL 369
Query: 145 VGILGAVLGMMGFF--QSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIED 202
+G+LG V+GM+ F ++ G + I ++LI+ GL ++ P+ Y
Sbjct: 370 IGLLGTVVGMIEAFGLVALYGDEGGASILSDSISKALITTAAGLIIAAPAIALYFIIKNR 429
Query: 203 SKKFAMQMEGFANEFSAIL 221
+ A +E E L
Sbjct: 430 IMRMASLVEVKVEEVITKL 448
>gi|170076607|ref|YP_001733246.1| MotA/TolQ/ExbB proton channel family protein [Synechococcus sp. PCC
7002]
gi|169887469|gb|ACB01177.1| MotA/TolQ/ExbB proton channel family [Synechococcus sp. PCC 7002]
Length = 215
Score = 77.9 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 46/218 (21%), Positives = 98/218 (44%), Gaps = 20/218 (9%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS--GQS 68
++I F G+ + LF+FS+ + II+++V + + R+ R+ + Q
Sbjct: 1 MNITNFFAAGGI----VAYPLFLFSLAGVACIIERAVFWWRINRRQRQVVRDALGLYRQD 56
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
K LK + ++ +A IF+ A+ +P + R+ ++ A E+ +
Sbjct: 57 PFNAMKFLKRNADLPIARIFLEALD---------LENPNSEEFRL--ALESATQAEIPTL 105
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQS--IAGYYSNNVV-SIPGIIESLISILLG 185
+ ++ + L+G+LG +LG+M F + I + N GI E+L+S ++G
Sbjct: 106 KRFNTVFDTIIAVAPLLGLLGTILGLMQSFSALNIGDVGNTNAAGVTGGISEALVSTVMG 165
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
L V+I + + N F ++ ++ + + + R
Sbjct: 166 LVVAIFTLLFANLFNGLYQRNLAFIQEYGGQLELLYRR 203
>gi|269862177|ref|XP_002650735.1| TolQ protein [Enterocytozoon bieneusi H348]
gi|220065700|gb|EED43324.1| TolQ protein [Enterocytozoon bieneusi H348]
Length = 77
Score = 77.9 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 155 MGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGF 213
M F +I + ++ P + E+LI+ GL +IP++ AYN++I K Q E F
Sbjct: 1 MTAFMNIGMAGQATLATVAPPVAEALIATAAGLFAAIPATAAYNRYIHQLDKLDAQYEVF 60
Query: 214 ANEFSAILSRQT 225
+EF+ IL RQ
Sbjct: 61 MDEFTNILHRQV 72
>gi|34540565|ref|NP_905044.1| MotA/TolQ/ExbB proton channel family protein [Porphyromonas
gingivalis W83]
gi|188994670|ref|YP_001928922.1| putative MotA/TolQ/ExbB proton channel protein [Porphyromonas
gingivalis ATCC 33277]
gi|34396878|gb|AAQ65943.1| MotA/TolQ/ExbB proton channel family protein [Porphyromonas
gingivalis W83]
gi|188594350|dbj|BAG33325.1| putative MotA/TolQ/ExbB proton channel protein [Porphyromonas
gingivalis ATCC 33277]
Length = 270
Score = 77.5 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 31/197 (15%), Positives = 73/197 (37%), Gaps = 18/197 (9%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITL----RRQFREFEQLFWSGQSLETVCKSLKNHHNIG 83
++ + I IL ++ +++ + + + +Q G K++
Sbjct: 76 MSTVAIALILGLAICLERIIYLNLADTNNEKLLADIDQALERGDV--EGAKTIARDTRGP 133
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
+A+I + + D ++R + + + + LS++ +
Sbjct: 134 VASIAYQGLMRIDQGVDI-----------VERSIVSYGGVQSGLLEKNLSWITLFIAMAP 182
Query: 144 LVGILGAVLGMMGFFQSIAGYYS-NNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIED 202
+G LG V+GM+ F I + V G+ +LI+ + GL V++ + YN +
Sbjct: 183 SLGFLGTVVGMVMAFDKIERVGDISPTVVAGGMKVALITTIGGLIVALILQVFYNYILSK 242
Query: 203 SKKFAMQMEGFANEFSA 219
+ +ME +
Sbjct: 243 VEGILNKMEDASITLLD 259
>gi|288801375|ref|ZP_06406829.1| MotA/TolQ/ExbB proton channel family protein [Prevotella sp. oral
taxon 299 str. F0039]
gi|288331758|gb|EFC70242.1| MotA/TolQ/ExbB proton channel family protein [Prevotella sp. oral
taxon 299 str. F0039]
Length = 266
Score = 77.5 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 30/185 (16%), Positives = 65/185 (35%), Gaps = 16/185 (8%)
Query: 43 IQKSVNFITLRRQFREFEQLFWS---GQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSC 99
I++ + ++F + ++L+ + +AAI C
Sbjct: 86 IERIIFLTLSEINAKKFMEELSQNITSKNLDKALQQCDATRG-PVAAI-----------C 133
Query: 100 DKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQ 159
+G + I+R + + + S++ + +G LG V+GM+ F
Sbjct: 134 KEGVMRIDQPIEEIERSIVSYGSVQTAYFERGCSWIRLFIAMAPSLGFLGTVIGMVLAFD 193
Query: 160 SIAGYYS-NNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFS 218
I + + G+ +LI+ + G+ V++ + YN I QME
Sbjct: 194 QIQTAGDISPTIVASGMKVALITTIFGIIVALILQLFYNYIISKIDHLTSQMEESVMTLL 253
Query: 219 AILSR 223
+ +
Sbjct: 254 DAIMQ 258
>gi|325982807|ref|YP_004295209.1| MotA/TolQ/ExbB proton channel [Nitrosomonas sp. AL212]
gi|325532326|gb|ADZ27047.1| MotA/TolQ/ExbB proton channel [Nitrosomonas sp. AL212]
Length = 497
Score = 77.5 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 37/214 (17%), Positives = 84/214 (39%), Gaps = 20/214 (9%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFW---SGQS 68
++ + G I+ L ++L+ + ++ T ++ + +
Sbjct: 275 TLIGIIDSGGPIGWIIVILGGFAALLA----LIRAQLLRTNSANTQQLTEQILGELASGD 330
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
LE KS +++ + + + + K D ++ ++ AI +E +
Sbjct: 331 LEVAKKSCEDN-SSAIGRVLHYTLRHLKDDRDH-----------MEGIVYEAILQESSPL 378
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISILLGLC 187
+ ++S L+G+LG V GM+ F I + + + + GI +L++ LGL
Sbjct: 379 DRFGVAILVIASVAPLLGLLGTVTGMIETFDMITEFGTGDPKLLSDGISIALVTTQLGLI 438
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
V+IP+ + + +K ME A + +
Sbjct: 439 VAIPALMLGSLLSSWAKNIKRDMEHSALKIINVF 472
>gi|237752065|ref|ZP_04582545.1| TonB system transporter ExbB [Helicobacter winghamensis ATCC
BAA-430]
gi|229376632|gb|EEO26723.1| TonB system transporter ExbB [Helicobacter winghamensis ATCC
BAA-430]
Length = 143
Score = 77.5 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 29/86 (33%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVS-IPGIIESLISILL 184
+ ITE L+ L + S VG+LG V+G+M F + + +V S + G+ +L + L
Sbjct: 50 DAITENLTTLHIIYSNAPYVGLLGTVIGIMITFYDMGMSGNIDVKSIVVGLSLALKATAL 109
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQM 210
GL V+IPS +AYN I +
Sbjct: 110 GLLVAIPSLMAYNALIRKVNLLSTHY 135
>gi|300728394|ref|ZP_07061756.1| MotA/TolQ/ExbB proton channel family protein [Prevotella bryantii
B14]
gi|299774313|gb|EFI70943.1| MotA/TolQ/ExbB proton channel family protein [Prevotella bryantii
B14]
Length = 278
Score = 77.5 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 39/209 (18%), Positives = 82/209 (39%), Gaps = 17/209 (8%)
Query: 13 IFALFMQMGLAVKCIITLLF---IFSILSWSVIIQKSVNFITL--RRQFREFEQLFWSGQ 67
++ + G+ V I TLL SI ++ T + +F +
Sbjct: 59 VWGTIFKGGVVVPVIHTLLLTVLAMSI-------ERYFALKTAFGKGSLPKFVANIKAAL 111
Query: 68 SLETV--CKSLKNHHNIGLAAIFMSAMSEWK--KSCDKGARSPIGIQDRIDRMMDVAIAR 123
L + +A + ++++ + +S +I + + A
Sbjct: 112 DANDFKKANELCDKQKGSVANVVKASLNAYADMESGANANLKKAQKVAKIQQAHEEATQL 171
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI-AGYYSNNVVSIPGIIESLISI 182
E+ +T L + ++ + G L G+LG V GM+ F ++ AG +++ GI E+LI+
Sbjct: 172 EMPTLTMNLPIIATIVTLGTLTGLLGTVTGMIKSFSALSAGGGADSAALSAGISEALINT 231
Query: 183 LLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
G+ S + ++YN + K ++
Sbjct: 232 AFGIATSWCAVVSYNFYTNKVDKLTYALD 260
>gi|308275257|emb|CBX31854.1| Biopolymer transport protein exbB [uncultured Desulfobacterium sp.]
Length = 144
Score = 77.5 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 28/87 (32%), Positives = 49/87 (56%), Gaps = 3/87 (3%)
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA--GYYSNNVVSIPGIIESLISILL 184
EIT+K+ + ++ S +G+LG VLG+M F ++ G+ + + G+ +L + +
Sbjct: 51 EITKKIHLIATIGSNAPYIGLLGTVLGVMLTFYTMGKEGFMDTGKIMV-GLSLALKATAV 109
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQME 211
GL V+IPS + YN + +K MQ E
Sbjct: 110 GLLVAIPSIVLYNFLLRKAKVLMMQWE 136
>gi|319956264|ref|YP_004167527.1| outer membrane transport energization protein exbb [Nitratifractor
salsuginis DSM 16511]
gi|319418668|gb|ADV45778.1| outer membrane transport energization protein ExbB [Nitratifractor
salsuginis DSM 16511]
Length = 145
Score = 77.5 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 27/102 (26%), Positives = 49/102 (48%), Gaps = 5/102 (4%)
Query: 115 RMMDVAIARELEEITEKLS----FLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
R +D+A R E + L+ L S+ S+ +G+LG VLG++ F + +
Sbjct: 37 RKIDLASYRHKEALETDLTANTTILSSIGSSAPYIGLLGTVLGIIITFYLLGQTKQMDAG 96
Query: 171 S-IPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
S + + +L + +GL V+IPS + YN + + + E
Sbjct: 97 SIMTSLSLALKATAMGLVVAIPSMLFYNHVVRKIEVLQNRWE 138
>gi|332880916|ref|ZP_08448586.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Capnocytophaga sp. oral taxon 329 str. F0087]
gi|332681090|gb|EGJ54017.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Capnocytophaga sp. oral taxon 329 str. F0087]
Length = 415
Score = 77.5 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 36/204 (17%), Positives = 71/204 (34%), Gaps = 28/204 (13%)
Query: 21 GLAVKC-----IITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG---QSLETV 72
A + I+ L++ IL+ + IQ+ R + + + + +
Sbjct: 210 DWAAQIKAGGFIMYPLYLLGILALVITIQRFFTSTRGRLAPKNLAEKVNACIARKDYDGA 269
Query: 73 CKSLKNHHNI---GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
K + L I ++W+ C AR++
Sbjct: 270 VDLCKKSSSTLGNSLGFIVEHRDADWETVCQTAGD---------------MAARDIRSHL 314
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFF--QSIAGYYSNNVVSIPGIIESLISILLGLC 187
++ L +SS L+G+ G ++GM+ F ++ G + I ++LI+ GL
Sbjct: 315 SRIYPLTVISSLSPLLGLFGTIVGMIEAFGLVALFGDEGGASILSDSISKALITTAAGLV 374
Query: 188 VSIPSSIAYNKFIEDSKKFAMQME 211
V++PS Y Q+E
Sbjct: 375 VAMPSIAVYFILKSRISNLGSQIE 398
>gi|307727800|ref|YP_003911013.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. CCGE1003]
gi|307588325|gb|ADN61722.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. CCGE1003]
Length = 203
Score = 77.5 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 38/198 (19%), Positives = 73/198 (36%), Gaps = 19/198 (9%)
Query: 17 FMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFW--SGQSLETVCK 74
MGL L S +I+++ + F + + E +L K
Sbjct: 10 VQSMGLIPILAFIFLLGIS-----IIVERFMFFSRAVKAGKTLEHDLKMVEPANLSDAQK 64
Query: 75 SLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSF 134
+++ E KS K P + ++R ++ I ++ + L
Sbjct: 65 VAEHYGQT--------VQGELVKSALKVRGKPEAV---VERELEETIMFQMPRLDRNLWI 113
Query: 135 LGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSS 193
L + + G L+G+LG ++GM+ F + + N GI +L + GL ++I
Sbjct: 114 LDTAVTLGPLLGLLGTIIGMVESFNVLGTSGTANPNGVTGGIGHALTATACGLTIAIVCV 173
Query: 194 IAYNKFIEDSKKFAMQME 211
I N F + + Q +
Sbjct: 174 IFLNYFNKRIRMTVNQFD 191
>gi|154174142|ref|YP_001407681.1| TonB-system energizer ExbB [Campylobacter curvus 525.92]
gi|112803597|gb|EAU00941.1| TonB-system energizer ExbB [Campylobacter curvus 525.92]
Length = 142
Score = 77.5 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 26/100 (26%), Positives = 46/100 (46%), Gaps = 1/100 (1%)
Query: 112 RIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVS 171
R+D +I E +T+ L+ L + S +G+LG V G+M F + + S
Sbjct: 36 RVDIRKFSSIEVLEEALTKNLTTLYIIYSNAPYIGLLGTVAGVMITFYDMGMSGGLDPKS 95
Query: 172 -IPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQM 210
+ G+ +L + GL V+IP+ + YN F+ +
Sbjct: 96 IMIGLSLALKATAFGLLVAIPTLMLYNAFMRKVDVLINRY 135
>gi|302037491|ref|YP_003797813.1| biopolymer transport protein Exbb [Candidatus Nitrospira defluvii]
gi|300605555|emb|CBK41888.1| Biopolymer transport protein ExbB [Candidatus Nitrospira defluvii]
Length = 141
Score = 77.2 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 23/83 (27%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVS-IPGIIESLISILLGL 186
+T+ L +G++++ +G+LG VLG+M F S+ + V S + G+ +L + +GL
Sbjct: 52 LTKHLVVIGTVAANAPYIGLLGTVLGIMLTFHSMGTSGTMAVQSIMVGLSLALKATAVGL 111
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQ 209
V+IP + N + Q
Sbjct: 112 LVAIPCVVLNNVLRRRVTELLTQ 134
>gi|328543882|ref|YP_004303991.1| MotA/TolQ/ExbB proton channel [polymorphum gilvum SL003B-26A1]
gi|326413626|gb|ADZ70689.1| MotA/TolQ/ExbB proton channel [Polymorphum gilvum SL003B-26A1]
Length = 239
Score = 77.2 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 35/161 (21%), Positives = 61/161 (37%), Gaps = 11/161 (6%)
Query: 63 FWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIA 122
W S++ + A+ + + G+ S I+D I R+
Sbjct: 59 LWRAGRRREALGSIEAPVSAAEEAVATA-----MRLRLVGSVSRSDIEDEIGRL----AV 109
Query: 123 RELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSN--NVVSIPGIIESLI 180
L + L L ++ L+G+ G VLGM+ FQ + ++ GI +L+
Sbjct: 110 IRLHSLQGGLKALDAIGQLAPLLGLFGTVLGMIAAFQELQSAGNSVDPSALAGGIWVALL 169
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+ GL V++P SI F + + +E A E L
Sbjct: 170 TTAAGLAVAMPVSIVLTFFESRIECERVAIETLAAEVLVTL 210
>gi|170695077|ref|ZP_02886225.1| MotA/TolQ/ExbB proton channel [Burkholderia graminis C4D1M]
gi|170139929|gb|EDT08109.1| MotA/TolQ/ExbB proton channel [Burkholderia graminis C4D1M]
Length = 203
Score = 77.2 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 38/198 (19%), Positives = 73/198 (36%), Gaps = 19/198 (9%)
Query: 17 FMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFW--SGQSLETVCK 74
MGL L S +I+++ + F + + E +L K
Sbjct: 10 VQSMGLIPLLAFIFLLGIS-----IIVERFMFFSRAVKAGKTLEHDLKMVEPANLSDAQK 64
Query: 75 SLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSF 134
+++ E KS K P + ++R ++ I ++ + L
Sbjct: 65 VAEHYGQT--------VQGELVKSALKVRGKPEAV---VERELEETIMFQMPRLDRNLWI 113
Query: 135 LGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSS 193
L + + G L+G+LG ++GM+ F + + N GI +L + GL ++I
Sbjct: 114 LDTAVTLGPLLGLLGTIIGMVESFNVLGTSGTANPNGVTGGIGHALTATACGLTIAIVCV 173
Query: 194 IAYNKFIEDSKKFAMQME 211
I N F + + Q +
Sbjct: 174 IFLNYFNKRIRMTVNQFD 191
>gi|34556940|ref|NP_906755.1| EXBB\TOLQ family transport protein [Wolinella succinogenes DSM
1740]
gi|34482655|emb|CAE09655.1| EXBB\TOLQ FAMILY TRANSPORT PROTEIN [Wolinella succinogenes]
Length = 194
Score = 77.2 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 19/107 (17%), Positives = 48/107 (44%), Gaps = 1/107 (0%)
Query: 114 DRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSI 172
+++V + L E T L+ L ++S +G+ G V+ ++ F + G ++ V
Sbjct: 82 REILEVCKHKALREATIGLTILSIIASTAPFIGLFGTVVEILEAFSKLGGGARASLDVIA 141
Query: 173 PGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
P I ++L++ G+ +IP+ + + + + ++ +
Sbjct: 142 PVISKALVATAAGILTAIPAYSFHLFLKRKAFELSSYLQMQMELLLS 188
>gi|330969760|gb|EGH69826.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. aceris str.
M302273PT]
Length = 94
Score = 77.2 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 152 LGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQM 210
G++ +I+ S ++ + G I E+L++ +G+ V++P+ +AYN F K +
Sbjct: 1 FGIIHALSAISQAKSASIAVVAGPIGEALVATGVGIAVAVPAVLAYNFFGRRLKLVIADL 60
Query: 211 EGFANEFSAILSRQT 225
E FA +F + R
Sbjct: 61 EEFAVDFLNLSQRNA 75
>gi|186685058|ref|YP_001868254.1| MotA/TolQ/ExbB proton channel [Nostoc punctiforme PCC 73102]
gi|186467510|gb|ACC83311.1| MotA/TolQ/ExbB proton channel [Nostoc punctiforme PCC 73102]
Length = 217
Score = 77.2 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 39/222 (17%), Positives = 92/222 (41%), Gaps = 21/222 (9%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+ I LF G+ ++ L FS+L ++II++ + ++ + + + + L+
Sbjct: 1 MEISNLFTAGGV----VMWPLLAFSLLGVALIIERIIFWVRINNRQNKVVREVLQLYRLD 56
Query: 71 ---TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ L+ + ++ +A IF++A+ + ++ E+
Sbjct: 57 NVVSALDKLQKNTDLPIARIFLAALE-----------LEEATPEEFRLALESEAQAEIPL 105
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGY---YSNNVVSIPGIIESLISILL 184
+ + ++ L+G+LG VLG++ F S+ + GI E+L+S
Sbjct: 106 LKRSQNIFETIIGLAPLLGLLGTVLGLINSFASLNIGDVGGTKTTGVTSGISEALVSTAS 165
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
GL V+I + + N F ++ ++ + + + R+ E
Sbjct: 166 GLVVAIFTLLFANTFRGLYQRQIAWIQEYGGQLELLYRRRYE 207
>gi|94501762|ref|ZP_01308275.1| Biopolymer transport protein [Oceanobacter sp. RED65]
gi|94426070|gb|EAT11065.1| Biopolymer transport protein [Oceanobacter sp. RED65]
Length = 222
Score = 77.2 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 25/217 (11%), Positives = 78/217 (35%), Gaps = 19/217 (8%)
Query: 17 FMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS--GQSLETVCK 74
F G + I +L I ++ +++ + + + F
Sbjct: 11 FQDGGFFIYPIAVVLLI----GIAITVERWRFLNREKARNLKAFDDFLPLLRTDDHDKMT 66
Query: 75 SLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSF 134
++ ++ + + + + + +++ M + + ++ ++ +
Sbjct: 67 LFTRDNDAPVSRMIGCGLDMMRVTKQRAD---------VEQAMSEGMMEAVPQLEQRTGY 117
Query: 135 LGSMSSAGLLVGILGAVLGMMGFFQSIAGY--YSNNVVSIPGIIESLISILLGLCVSIPS 192
L +++ L+G+LG ++G++ F ++A + + I ++ + GL +IP
Sbjct: 118 LSVLANVATLLGLLGTIIGLIAAFTAVANADPAEKSKLLSMSISVAMNTTAFGLIAAIPL 177
Query: 193 SIAYNKFIEDSKKFAMQMEGFANEFSAI--LSRQTEG 227
+ + + +E +F + L+R E
Sbjct: 178 LVFHAILTNKTNAIIASIEMAGVKFLNVMTLNRAIEA 214
>gi|222823493|ref|YP_002575067.1| TonB system transport protein ExbB [Campylobacter lari RM2100]
gi|222538715|gb|ACM63816.1| TonB system transport protein ExbB [Campylobacter lari RM2100]
Length = 143
Score = 77.2 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 26/89 (29%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVS-IPGIIESLISILL 184
+ I+E L+ L + + VG+LG V+G+M F + + +V S + G+ +L + L
Sbjct: 50 DAISENLTMLYIIYTNAPYVGLLGTVVGIMITFYDMGASGNIDVKSIVIGLSLALKATAL 109
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGF 213
G+ V+IPS +AYN + + F
Sbjct: 110 GILVAIPSLMAYNGLLRKISTLSNAYRIF 138
>gi|220933724|ref|YP_002512623.1| MotA/TolQ/ExbB proton channel [Thioalkalivibrio sp. HL-EbGR7]
gi|219995034|gb|ACL71636.1| MotA/TolQ/ExbB proton channel [Thioalkalivibrio sp. HL-EbGR7]
Length = 222
Score = 77.2 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 31/215 (14%), Positives = 80/215 (37%), Gaps = 19/215 (8%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFW---SGQS 68
+I F Q G+ + I+ +L + ++ I++ V + + Q
Sbjct: 6 NIVQFFQQGGVFMYPIVVVLAL----GLAIAIERYVYLSVFSLRNQRTWQQLLPLLQTGK 61
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
L ++ ++ I +S + ++ M+ + + I
Sbjct: 62 LREA-QAYTEQSKAAISRILNYGLSRLGIARRTSD---------LEMAMEEGLMEVVPRI 111
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI--PGIIESLISILLGL 186
++ +L ++++ L+G+LG ++G++ F ++A + I ++ + GL
Sbjct: 112 EKRTHYLATLANIATLLGLLGTIIGLIEAFTAVASANPAEKADMLSASISVAMNTTAFGL 171
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
V IP + + S + +E + + I+
Sbjct: 172 MVGIPLLMIHAVLQTKSTQIIDSLEMASVKVMNII 206
>gi|261879932|ref|ZP_06006359.1| MotA/TolQ/ExbB proton channel family protein [Prevotella bergensis
DSM 17361]
gi|270333448|gb|EFA44234.1| MotA/TolQ/ExbB proton channel family protein [Prevotella bergensis
DSM 17361]
Length = 281
Score = 76.8 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 49/213 (23%), Positives = 95/213 (44%), Gaps = 13/213 (6%)
Query: 7 AIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITL--RRQFREFEQLFW 64
A +++ + G+ V I TLL +L SV ++ + T + +F
Sbjct: 56 ANAPLNMMGTIFKGGVVVPVIHTLLLT--VLCLSV--ERWLALKTAFGKGNLTKFVANVK 111
Query: 65 SGQSLETVCKS--LKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDR---MMDV 119
+ K+ L N +A + +++++ + KS + GA + + ++ + +
Sbjct: 112 AALRANDFAKAEDLCNKMRGSVANVVLASLNAY-KSMESGANAGLKKSQKVAKIQQAHEE 170
Query: 120 AIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA-GYYSNNVVSIPGIIES 178
A E+ + L L +M + G L G+LG V GM+ FQ++A G +++ GI E+
Sbjct: 171 ATQLEMPTLQMNLPILATMVTLGTLTGLLGTVTGMIKSFQALAAGGGGDSLQLSAGISEA 230
Query: 179 LISILLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
LI+ G+ S + I+YN F K ++
Sbjct: 231 LINTAFGIATSWCAVISYNFFTNKIDKLTYALD 263
>gi|15805483|ref|NP_294179.1| biopolymer transport protein [Deinococcus radiodurans R1]
gi|6458137|gb|AAF10032.1|AE001904_8 biopolymer transport protein, putative [Deinococcus radiodurans R1]
Length = 230
Score = 76.8 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 39/175 (22%), Positives = 71/175 (40%), Gaps = 5/175 (2%)
Query: 48 NFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPI 107
+ L R ++ L ++L + L+ + + A + ++ R P
Sbjct: 31 RLLALMRMGQDASALIERARALTAESGPQAALREVDLSGLDIPAAQVLRAGLNRADRGP- 89
Query: 108 GIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYS- 166
+ M+ A+ +E + LS LG+ + L+G+LG V+GM+ F + +
Sbjct: 90 ---EAAQAAMNAALIQEDGRMYAGLSALGTAAQIAPLLGLLGTVVGMVRSFLVFSATNNP 146
Query: 167 NNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
GI E+LI+ GL V+I + +A N + A Q E E + L
Sbjct: 147 TPTELAQGISEALINTAAGLIVAIVAYVARNALRNKANAVAAQAERVREELPSWL 201
>gi|330955940|gb|EGH56200.1| biopolymer transport protein ExbB [Pseudomonas syringae Cit 7]
Length = 96
Score = 76.8 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 151 VLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQ 209
V G+M QSI S ++ ++ G I +L++ +G+ V++P+ + YN F+ K
Sbjct: 1 VWGIMEALQSIGVTGSASLEAVAGPIGHALVATGVGIAVAVPAVLIYNFFLRRLKLAVAD 60
Query: 210 MEGFANEFSAILSR 223
M+ FA++F A+ R
Sbjct: 61 MDDFAHDFDALAQR 74
>gi|311694760|gb|ADP97633.1| biopolymer transport protein [marine bacterium HP15]
Length = 193
Score = 76.8 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 31/203 (15%), Positives = 81/203 (39%), Gaps = 20/203 (9%)
Query: 27 IITLLFIFSILSWSVIIQKSVNFITLRRQFR-EFEQL---FWSGQSLETVCKSLKNHHNI 82
I +L + ++ +++ +RR+ R FE+ + + K+ N +
Sbjct: 4 IAIVLAL----GLAITLERFFYLSAVRRRNRIAFERGILPLLRKRDYQRAMKAATN-SDS 58
Query: 83 GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAG 142
+A+I + + G ++ I+ M+ + L + ++ +L ++++
Sbjct: 59 AIASIMGAGI---------GRLLSNSRREDIEYAMEEGLMEVLPRLEKRTQYLATLANIA 109
Query: 143 LLVGILGAVLGMMGFFQSIAGY--YSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFI 200
L+G+LG ++G++ F ++A + I ++ + GL +IP + +
Sbjct: 110 TLLGLLGTIIGLIAAFTAVAAADPSQKASLLSESISVAMNTTAFGLMSAIPLLMFHAVLQ 169
Query: 201 EDSKKFAMQMEGFANEFSAILSR 223
+ + E + I+S
Sbjct: 170 TRTNEIVDSFEMAGVKLLNIVSE 192
>gi|46581210|ref|YP_012018.1| MotA/TolQ/ExbB proton channel family protein [Desulfovibrio
vulgaris str. Hildenborough]
gi|46450631|gb|AAS97278.1| MotA/TolQ/ExbB proton channel family protein [Desulfovibrio
vulgaris str. Hildenborough]
gi|311234880|gb|ADP87734.1| MotA/TolQ/ExbB proton channel [Desulfovibrio vulgaris RCH1]
Length = 249
Score = 76.8 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 45/196 (22%), Positives = 87/196 (44%), Gaps = 15/196 (7%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAI 87
+ L SIL+ +V++ + + T + F L + ++++ L A+
Sbjct: 11 MWPLLGLSILACAVMLDRGIALSTFGFPAKGF---------LSALTEAVRRSDATALRAL 61
Query: 88 FMSAMSEWKKSCD-KGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVG 146
+ D +P ++R R+M A+ L E+T ++ LG + A L+G
Sbjct: 62 CADLPEALRPLLDVLFPTTPRPDRERAVRIMGEAV---LHELTRRVGVLGLVVRAAPLLG 118
Query: 147 ILGAVLGMMGFFQSIAGYYSNNVVS--IPGIIESLISILLGLCVSIPSSIAYNKFIEDSK 204
+LG VLGM+ F ++A ++ GI ++LI+ GL ++IP+ A + +
Sbjct: 119 LLGTVLGMISTFSTVAASGGGIDMAGLAAGIWQALITTAAGLGIAIPALAAQHWCNQRID 178
Query: 205 KFAMQMEGFANEFSAI 220
A +E A+ A+
Sbjct: 179 AVAEALEQLADAVEAL 194
>gi|261251454|ref|ZP_05944028.1| ferric siderophore transport system biopolymer transport protein
ExbB [Vibrio orientalis CIP 102891]
gi|260938327|gb|EEX94315.1| ferric siderophore transport system biopolymer transport protein
ExbB [Vibrio orientalis CIP 102891]
Length = 228
Score = 76.8 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 31/193 (16%), Positives = 66/193 (34%), Gaps = 22/193 (11%)
Query: 28 ITLLFIFSILSWSVIIQKSVN----FITLRRQFREFEQLFW--SGQSLETVCKSLKNHHN 81
L I S L+ +I ++ +R R +E + + L
Sbjct: 15 AWPLIICSALTLMIIAERLFQVVISLGVGKRAIRRELSNISPTRSNDIEALAEQLSPRRP 74
Query: 82 IGLAAIFMS-AMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSS 140
+ + M A + K+ + A + + ++ L L +
Sbjct: 75 LLYKGVAMVLAHHSFPKTLREDAAGMW-------------LQEKRHQLNSGLRLLTLIGV 121
Query: 141 AGLLVGILGAVLGMMGFFQSIAGYYSNNV--VSIPGIIESLISILLGLCVSIPSSIAYNK 198
L+G+LG VLG++ F+ +A N G+ ++ + GL +++P+
Sbjct: 122 ISPLIGLLGTVLGLIEMFKGVAASSGNITPNDLADGLGLAMRTTAAGLLIALPAIAGAQL 181
Query: 199 FIEDSKKFAMQME 211
+ K ++E
Sbjct: 182 LGLWADKVMAKLE 194
>gi|218247786|ref|YP_002373157.1| MotA/TolQ/ExbB proton channel [Cyanothece sp. PCC 8801]
gi|257060895|ref|YP_003138783.1| MotA/TolQ/ExbB proton channel [Cyanothece sp. PCC 8802]
gi|218168264|gb|ACK67001.1| MotA/TolQ/ExbB proton channel [Cyanothece sp. PCC 8801]
gi|256591061|gb|ACV01948.1| MotA/TolQ/ExbB proton channel [Cyanothece sp. PCC 8802]
Length = 217
Score = 76.8 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 42/219 (19%), Positives = 89/219 (40%), Gaps = 21/219 (9%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ---LFWSGQ 67
+SI F+ G + L FS+L ++II++++ + ++ + + +
Sbjct: 1 MSITEFFLAGG----AVAWPLLGFSLLGVALIIERAIFWYRIKSRQHKVVTTALKLYRAD 56
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ LK + ++ + IF+ A+ P ++ A EL
Sbjct: 57 QVAAAITKLKQNADLPVCRIFLEALD-----------LPDASPTEFRLALETATQAELPL 105
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI---AGYYSNNVVSIPGIIESLISILL 184
+ ++ + L+G+LG +LG+M F ++ +N GI E+LIS ++
Sbjct: 106 FKRFNTLFQTVITVSPLLGLLGTILGLMQSFAALDIGNVGGTNATRVTGGISEALISTVM 165
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
GL V+I + N F + ++ +A + + R
Sbjct: 166 GLVVAISILLFANSFRSFYLRQLALIQEYAGQLELLYRR 204
>gi|307565564|ref|ZP_07628044.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Prevotella amnii CRIS 21A-A]
gi|307345723|gb|EFN91080.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Prevotella amnii CRIS 21A-A]
Length = 279
Score = 76.8 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 42/209 (20%), Positives = 90/209 (43%), Gaps = 17/209 (8%)
Query: 13 IFALFMQMGLAVKCIITLLF---IFSILSWSVIIQKSVNFITL--RRQFREFEQLFWSGQ 67
++ + G+ V I TLL SI ++ + T + +F Q +
Sbjct: 60 VWGTIYKGGVVVPVIHTLLLTVLAMSI-------ERWLALKTAFGKGALPKFVQNIKAAL 112
Query: 68 SLETVCKS--LKNHHNIGLAAIFMSAMSEWK--KSCDKGARSPIGIQDRIDRMMDVAIAR 123
+ + K+ L + +A + ++++ +K ++ + +I + + A
Sbjct: 113 NNNDLAKANQLCDQQRGSVANVVKASLNAYKNMETGANSSLKKANKVAKIQQAHEEATQL 172
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA-GYYSNNVVSIPGIIESLISI 182
E+ +T L + ++ + G L G+LG V GM+ F ++A G +++ GI E+LI+
Sbjct: 173 EMPTLTMNLPIVATLVTLGTLTGLLGTVTGMIKSFSALASGGGADSAALSAGISEALINT 232
Query: 183 LLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
G+ S + ++YN F K ++
Sbjct: 233 AFGIATSWCAVVSYNYFSNKVDKLTYALD 261
>gi|125950241|gb|ABN58728.1| ExbB [Flavobacterium psychrophilum]
Length = 156
Score = 76.8 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 33/153 (21%), Positives = 67/153 (43%), Gaps = 3/153 (1%)
Query: 78 NHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGS 137
+ +A + + +++ +G S + I + ++ + E+ + + L+ + +
Sbjct: 5 DKQKGSVANTIKAGLVKYQAVKAEGFSSEDAT-ETIHKEIEEVTSLEMPMLEKNLTIIST 63
Query: 138 MSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV-SIPGIIESLISILLGLCVSIPSSIAY 196
+ S G L G+LG V GM+ F +AG + GI E+LI+ G+ S + I Y
Sbjct: 64 LVSLGTLAGLLGTVTGMIKAFAGLAGGGGADSAELANGISEALINTATGISTSALAIIVY 123
Query: 197 NKFIEDSKKFAMQMEGFANEFSAILSRQTEGNI 229
N F ++ AN R+ +G++
Sbjct: 124 NFFTSKIDTLTYSIDEAANTIVNT-YRRFKGSV 155
>gi|288929936|ref|ZP_06423778.1| MotA/TolQ/ExbB proton channel family protein [Prevotella sp. oral
taxon 317 str. F0108]
gi|288328755|gb|EFC67344.1| MotA/TolQ/ExbB proton channel family protein [Prevotella sp. oral
taxon 317 str. F0108]
Length = 276
Score = 76.8 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 43/208 (20%), Positives = 84/208 (40%), Gaps = 9/208 (4%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITL--RRQFREFEQLFWSG 66
+ I+ + GL V I TLL LS +++ + T +F +
Sbjct: 55 HPLDIWGTIYKGGLVVPVIQTLLLTVLALS----VERWLALRTAFGTGSLTKFVANIKAA 110
Query: 67 QSLETV--CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARE 124
+ + + L + +A + +++ +K +I + + A E
Sbjct: 111 LNAKDFNRAQQLCDKQKGSVANVVSASLQAYKAMETVHGIKLSQKIAKIQQAHEEATQLE 170
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI-AGYYSNNVVSIPGIIESLISIL 183
+ + L L ++ + G L G+LG V GM+ FQ++ AG +++ GI E+LI+
Sbjct: 171 MPTLQMNLPILATLVTLGTLTGLLGTVTGMIKSFQALAAGGGGDSLALSAGISEALINTA 230
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQME 211
G+ S + I+Y F K ++
Sbjct: 231 FGITTSWFAVISYGFFTNKIDKLTYALD 258
>gi|322379224|ref|ZP_08053615.1| Putative biopolymer transport protein exbB-like 1 [Helicobacter
suis HS1]
gi|321148364|gb|EFX42873.1| Putative biopolymer transport protein exbB-like 1 [Helicobacter
suis HS1]
Length = 183
Score = 76.4 bits (187), Expect = 3e-12, Method: Composition-based stats.
Identities = 37/202 (18%), Positives = 72/202 (35%), Gaps = 32/202 (15%)
Query: 18 MQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLK 77
GL ++ LL I+ IL+ V K V+ T + QSLE + +
Sbjct: 9 ASSGLVTLFVLILLSIYFILTLWVFFYKYVSIKT---------NILKEKQSLEAIMGGAQ 59
Query: 78 NHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGS 137
K A ++ + ++ L + T L L
Sbjct: 60 KD------------------LQFKSAHMDKPSKEWLAVW----KSQLLRQNTTGLVVLSI 97
Query: 138 MSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYN 197
++S VG+ G V+ ++ F + G S + V P I ++L++ G+ +IP+ +
Sbjct: 98 IASTAPFVGLFGTVVEILETFGHLGGQVSFD-VIAPTISKALVATAAGILTAIPAYSFFL 156
Query: 198 KFIEDSKKFAMQMEGFANEFSA 219
++ ++ + A
Sbjct: 157 ILKRKVYDLSVYVQMQIDMLIA 178
>gi|120601557|ref|YP_965957.1| MotA/TolQ/ExbB proton channel [Desulfovibrio vulgaris DP4]
gi|120561786|gb|ABM27530.1| outer membrane transport energization protein ExbB [Desulfovibrio
vulgaris DP4]
Length = 249
Score = 76.4 bits (187), Expect = 3e-12, Method: Composition-based stats.
Identities = 45/196 (22%), Positives = 87/196 (44%), Gaps = 15/196 (7%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAI 87
+ L SIL+ +V++ + + T + F L T+ ++++ L A+
Sbjct: 11 MWPLLGLSILACAVMLDRGIALSTFGFPAKGF---------LSTLTEAVRRSDATALRAL 61
Query: 88 FMSAMSEWKKSCD-KGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVG 146
+ D +P ++R R+M A+ L E+T ++ LG + A L+G
Sbjct: 62 CADLPEALRPLLDVLFPTAPRPDRERAVRIMGEAV---LHELTRRVGVLGLVVRAAPLLG 118
Query: 147 ILGAVLGMMGFFQSIAGYYSNNVVS--IPGIIESLISILLGLCVSIPSSIAYNKFIEDSK 204
+LG VLGM+ F ++A ++ GI ++LI+ GL ++IP+ A + +
Sbjct: 119 LLGTVLGMISTFSTVAASGGGIDMAGLAAGIWQALITTAAGLGIAIPALAAQHWCNQRID 178
Query: 205 KFAMQMEGFANEFSAI 220
A +E + A+
Sbjct: 179 AVAEALEQLTDAVEAL 194
>gi|307748484|gb|ADN91754.1| Biopolymer transport protein exbB [Campylobacter jejuni subsp.
jejuni M1]
Length = 145
Score = 76.4 bits (187), Expect = 3e-12, Method: Composition-based stats.
Identities = 24/88 (27%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVS-IPGIIESLISILL 184
+ I+E L+ + + S +G+LG V+G+M F + + +V S + G+ +L + L
Sbjct: 54 DAISENLTTIYIIYSNAPYIGLLGTVIGIMVTFYEMGLAGNIDVKSIVVGLSLALKATAL 113
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEG 212
GL V+IP+ +AYN + + +
Sbjct: 114 GLLVAIPALMAYNALLRKVSLLSNAYKA 141
>gi|29345695|ref|NP_809198.1| putative tolQ-type transport protein [Bacteroides thetaiotaomicron
VPI-5482]
gi|29337588|gb|AAO75392.1| putative tolQ-type transport protein [Bacteroides thetaiotaomicron
VPI-5482]
Length = 472
Score = 76.4 bits (187), Expect = 3e-12, Method: Composition-based stats.
Identities = 24/116 (20%), Positives = 48/116 (41%), Gaps = 2/116 (1%)
Query: 108 GIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFF--QSIAGYY 165
++ + + AR++ ++ L ++S L+G+LG V+GM+ F ++ G
Sbjct: 334 AGREAVSQTAGDMAARDIRTHLSRIYPLSVIASLSPLIGLLGTVVGMIEAFGLVALYGDE 393
Query: 166 SNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+ I ++LI+ GL ++ P+ Y K A +E L
Sbjct: 394 GGASILSDSISKALITTAAGLIIAAPAIALYFIIKNRIMKLASLVEVEVENVITTL 449
>gi|294054892|ref|YP_003548550.1| MotA/TolQ/ExbB proton channel [Coraliomargarita akajimensis DSM
45221]
gi|293614225|gb|ADE54380.1| MotA/TolQ/ExbB proton channel [Coraliomargarita akajimensis DSM
45221]
Length = 189
Score = 76.4 bits (187), Expect = 3e-12, Method: Composition-based stats.
Identities = 32/199 (16%), Positives = 69/199 (34%), Gaps = 27/199 (13%)
Query: 14 FALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVC 73
L G+ L +FS ++ + +++ + R + F
Sbjct: 1 MDLITNAGVFA----YPLIVFSFIAVFITVERLIALRNASVIPRHMVEAFVDSN-----V 51
Query: 74 KSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLS 133
+++ + I + + + A ++ E+ + +
Sbjct: 52 AAMEADAKSVMGRIVL-----FFRERKPDA-----------EALNAFARLEVTRMERGVF 95
Query: 134 FLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYS--NNVVSIPGIIESLISILLGLCVSIP 191
L + A L+G+LG V G+ F + + V I GI +L + +LGL V+IP
Sbjct: 96 LLEIVVGAAPLLGLLGTVTGLTQVFGGFSAETGLPDPAVFITGIALALNTTILGLAVAIP 155
Query: 192 SSIAYNKFIEDSKKFAMQM 210
+ +A+ A ++
Sbjct: 156 ALVAHAYLARRIDSLAARI 174
>gi|330955649|gb|EGH55909.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae Cit 7]
Length = 95
Score = 76.4 bits (187), Expect = 3e-12, Method: Composition-based stats.
Identities = 20/76 (26%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 151 VLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQ 209
+ G++ +I+ S ++ + G I E+L++ +G+ V++P+ +AYN F K
Sbjct: 1 MFGIIHALTAISQARSASIAVVAGPIGEALVATGVGIAVAVPAVLAYNFFGRRLKLVIAD 60
Query: 210 MEGFANEFSAILSRQT 225
+E FA +F + R
Sbjct: 61 LEEFAVDFLNLSQRNA 76
>gi|149908300|ref|ZP_01896964.1| TonB system biopolymer transport component [Moritella sp. PE36]
gi|149808842|gb|EDM68775.1| TonB system biopolymer transport component [Moritella sp. PE36]
Length = 470
Score = 76.4 bits (187), Expect = 3e-12, Method: Composition-based stats.
Identities = 36/205 (17%), Positives = 81/205 (39%), Gaps = 29/205 (14%)
Query: 17 FMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSL 76
F Q G+ I +L I++ I S + ++ Q
Sbjct: 258 FQQGGVIGYLIFAILIFGLIVALVRFIVLSKESLKIKAQLNNTLANL------------- 304
Query: 77 KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLG 136
+ L IF ++++ + + ++ ++ A+ RE+ + S L
Sbjct: 305 ----DNSLGRIFAI----YQQNKKQNTQV-------LELKIEEAVLREIPRLERGSSVLK 349
Query: 137 SMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-VVSIPGIIESLISILLGLCVSIPSSIA 195
+++ ++G+LG V GM+ FQSI + + + + GI +LI+ ++GL ++P +
Sbjct: 350 VLAAIAPMMGLLGTVTGMIATFQSITLFGTGDPKLMAGGISMALITTVMGLIAALPLLLI 409
Query: 196 YNKFIEDSKKFAMQMEGFANEFSAI 220
++ + +E + A+
Sbjct: 410 HSLLHSRANSLINILEQQSAGLIAL 434
>gi|121613271|ref|YP_001001271.1| TonB system transport protein ExbB [Campylobacter jejuni subsp.
jejuni 81-176]
gi|121504231|gb|EAQ72747.2| TonB system transport protein ExbB [Campylobacter jejuni subsp.
jejuni 81-176]
Length = 145
Score = 76.4 bits (187), Expect = 3e-12, Method: Composition-based stats.
Identities = 24/88 (27%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVS-IPGIIESLISILL 184
+ I+E L+ + + S +G+LG V+G+M F + + +V S + G+ +L + L
Sbjct: 54 DAISENLTTIYIIYSNAPYIGLLGTVIGIMVTFYEMGLAGNIDVKSIVVGLSLALKATAL 113
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEG 212
GL V+IP+ +AYN + + +
Sbjct: 114 GLLVAIPALMAYNALLRKVSLLSNAYKA 141
>gi|298384595|ref|ZP_06994155.1| TolQ-type transporter [Bacteroides sp. 1_1_14]
gi|298262874|gb|EFI05738.1| TolQ-type transporter [Bacteroides sp. 1_1_14]
Length = 467
Score = 76.4 bits (187), Expect = 3e-12, Method: Composition-based stats.
Identities = 24/116 (20%), Positives = 48/116 (41%), Gaps = 2/116 (1%)
Query: 108 GIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFF--QSIAGYY 165
++ + + AR++ ++ L ++S L+G+LG V+GM+ F ++ G
Sbjct: 329 AGREAVSQTAGDMAARDIRTHLSRIYPLSVIASLSPLIGLLGTVVGMIEAFGLVALYGDE 388
Query: 166 SNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+ I ++LI+ GL ++ P+ Y K A +E L
Sbjct: 389 GGASILSDSISKALITTAAGLIIAAPAIALYFIIKNRIMKLASLIEVEVENVITTL 444
>gi|294053814|ref|YP_003547472.1| MotA/TolQ/ExbB proton channel [Coraliomargarita akajimensis DSM
45221]
gi|293613147|gb|ADE53302.1| MotA/TolQ/ExbB proton channel [Coraliomargarita akajimensis DSM
45221]
Length = 253
Score = 76.4 bits (187), Expect = 3e-12, Method: Composition-based stats.
Identities = 42/222 (18%), Positives = 83/222 (37%), Gaps = 15/222 (6%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLET 71
++ L G A + L + S+ + I + ++ R E L+
Sbjct: 38 TLLDLLKAGGWA----MVPLALLSMGTVGFTIY-NFVYVRQRNFIDEGV-----VVQLDQ 87
Query: 72 VCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEK 131
+ + A ++ K + +++ + A +REL
Sbjct: 88 AIEQADMARANEICAQSPGVVTNTLKHSLTQMEQARFAPEALEKAFETASSRELASAYVV 147
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSN-NVVSIPGIIESLISILLGLCVSI 190
+++L +S+ +VG+LG V GM+ F SIA + I E+LI+ G+ ++I
Sbjct: 148 VNYLSIISAIAPMVGLLGTVSGMVKAFNSIAAEGMGKPELLADNISEALITTASGMAIAI 207
Query: 191 PSSIAYNKFIEDSKKFAMQMEGFANEFSAIL----SRQTEGN 228
P+ + F K ++ + L +RQ EG+
Sbjct: 208 PAMFFFFFFRNRYGKIVSEVNLVLGQLYGQLLHVGNRQGEGH 249
>gi|126740083|ref|ZP_01755773.1| MotA/TolQ/ExbB proton channel [Roseobacter sp. SK209-2-6]
gi|126718902|gb|EBA15614.1| MotA/TolQ/ExbB proton channel [Roseobacter sp. SK209-2-6]
Length = 363
Score = 76.4 bits (187), Expect = 3e-12, Method: Composition-based stats.
Identities = 41/193 (21%), Positives = 76/193 (39%), Gaps = 12/193 (6%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAI 87
I + S+++ ++I+ K + WS + + + AI
Sbjct: 166 IWAIAALSVITLALILWKIWRLALIGA---------WSRGKASKAVLAYEAGNPAAALAI 216
Query: 88 FMSAMSEWKKSCDKGARSPIGI-QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVG 146
M K G + + +DR + L + L L +++ L+G
Sbjct: 217 VEGRMGIRSKVVSAGLAALCNLPEDRAREETARIAKKHLAQAGTGLGALELIATIAPLLG 276
Query: 147 ILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSK 204
+LG VLGM+ FQ++ AG ++ + GI E+L++ G+ V+IP+S A F
Sbjct: 277 LLGTVLGMIAAFQALQQAGSKADPALLAGGIWEALLTTAAGMAVAIPASAALTWFESVIT 336
Query: 205 KFAMQMEGFANEF 217
+ +E A
Sbjct: 337 RIRQDIEDSATRL 349
>gi|283953757|ref|ZP_06371288.1| TonB system transport protein ExbB [Campylobacter jejuni subsp.
jejuni 414]
gi|283794798|gb|EFC33536.1| TonB system transport protein ExbB [Campylobacter jejuni subsp.
jejuni 414]
Length = 123
Score = 76.4 bits (187), Expect = 3e-12, Method: Composition-based stats.
Identities = 24/88 (27%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVS-IPGIIESLISILL 184
+ I+E L+ + + S +G+LG V+G+M F + + +V S + G+ +L + L
Sbjct: 32 DAISENLTTIYIIYSNAPYIGLLGTVIGIMVTFYEMGLTGNIDVKSIVVGLSLALKATAL 91
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEG 212
GL V+IP+ +AYN + + +
Sbjct: 92 GLLVAIPALMAYNALLRKVSLLSNAYKA 119
>gi|119510707|ref|ZP_01629835.1| MotA/TolQ/ExbB proton channel [Nodularia spumigena CCY9414]
gi|119464661|gb|EAW45570.1| MotA/TolQ/ExbB proton channel [Nodularia spumigena CCY9414]
Length = 255
Score = 76.4 bits (187), Expect = 3e-12, Method: Composition-based stats.
Identities = 53/221 (23%), Positives = 89/221 (40%), Gaps = 23/221 (10%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG--QS 68
+ I LF + G A + LF+ S+LS SVI ++ ++ + Q +E + + S
Sbjct: 1 MDILDLFEKGGPA----MWPLFVLSVLSISVIFERLWFWLRIMTQEKEIVERVLNAAQDS 56
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
E + + + + +S K+ + ++ EL +
Sbjct: 57 WEIAADIARKARHQPIGRFLYAPLSYPKRDP-----------ETFRLALESTAEDELAGM 105
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI----AGYYSNNVVSIPGIIESLISILL 184
L ++ + L+G+LG VLG++ +SI G S V+ GI ESLIS
Sbjct: 106 RRGEKLLEAVIALSPLLGLLGTVLGLIQSLRSIRIGDLGTESTAGVTT-GIGESLISTAT 164
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
GL V+I S + Y F NE +L RQ+
Sbjct: 165 GLIVAIISLVFYRLFQSFVVDQVKIFRKAGNE-MELLYRQS 204
>gi|292493797|ref|YP_003529236.1| MotA/TolQ/ExbB proton channel [Nitrosococcus halophilus Nc4]
gi|291582392|gb|ADE16849.1| MotA/TolQ/ExbB proton channel [Nitrosococcus halophilus Nc4]
Length = 208
Score = 76.4 bits (187), Expect = 3e-12, Method: Composition-based stats.
Identities = 39/198 (19%), Positives = 76/198 (38%), Gaps = 24/198 (12%)
Query: 15 ALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCK 74
+ F Q G ++ L + ++L W I + +L +V +
Sbjct: 11 SHFYQAGG---YVMPPLMVATLLLWFAIGYRFWILRR---------------GTLLSVRE 52
Query: 75 SLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSF 134
L M E +G + R +D A A + +E+ + +
Sbjct: 53 CLYRLQEEPHPQ--AKGMIEH--MIVQGLVIVRTRPPYLRRHLDEAFATQEKELKKFSTL 108
Query: 135 LGSMSSAGLLVGILGAVLGMMGFFQSIAGYY--SNNVVSIPGIIESLISILLGLCVSIPS 192
+ S+ L+G+LG V+GM+ F+S+A + + GI ++L + +GL V+IP
Sbjct: 109 IRSIVVIAPLLGLLGTVVGMIETFESLADMALFTQSGGIAGGISQALFTTQMGLVVAIPG 168
Query: 193 SIAYNKFIEDSKKFAMQM 210
+ K+ M++
Sbjct: 169 LLIKGLLDRKQKQLEMEL 186
>gi|294674494|ref|YP_003575110.1| MotA/TolQ/ExbB proton channel family protein [Prevotella ruminicola
23]
gi|294472321|gb|ADE81710.1| MotA/TolQ/ExbB proton channel family protein [Prevotella ruminicola
23]
Length = 280
Score = 76.4 bits (187), Expect = 3e-12, Method: Composition-based stats.
Identities = 26/154 (16%), Positives = 60/154 (38%), Gaps = 12/154 (7%)
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
K+L + +A++ + K+ D I+R + + + +
Sbjct: 131 EGAKTLCRNTRGPVASVCYQGLLHIKQP-----------MDAIERSITNFGGLQTANLEK 179
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYS-NNVVSIPGIIESLISILLGLCVS 189
S++ + +G LG V+GM+ F I + G+ +LI+ + G+ V+
Sbjct: 180 GCSWIKLFIAMAPSLGFLGTVIGMVMAFDQIQQVGDIGPTIVAQGMKVALITTIFGIIVA 239
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
+ + Y+ + ++ QME A +++
Sbjct: 240 LVLQLFYSYILSKIERLTAQMEEAAITLLDLIAE 273
>gi|253567682|ref|ZP_04845093.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
gi|251841755|gb|EES69835.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
Length = 467
Score = 76.4 bits (187), Expect = 3e-12, Method: Composition-based stats.
Identities = 24/116 (20%), Positives = 48/116 (41%), Gaps = 2/116 (1%)
Query: 108 GIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFF--QSIAGYY 165
++ + + AR++ ++ L ++S L+G+LG V+GM+ F ++ G
Sbjct: 329 AGREAVSQTAGDMAARDIRTHLSRIYPLSVIASLSPLIGLLGTVVGMIEAFGLVALYGDE 388
Query: 166 SNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+ I ++LI+ GL ++ P+ Y K A +E L
Sbjct: 389 GGASILSDSISKALITTAAGLIIAAPAIALYFIIKNRIMKLASLVEVEVENVITTL 444
>gi|315931673|gb|EFV10634.1| tonB-system energizer ExbB [Campylobacter jejuni subsp. jejuni 327]
Length = 123
Score = 76.4 bits (187), Expect = 3e-12, Method: Composition-based stats.
Identities = 24/88 (27%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVS-IPGIIESLISILL 184
+ I+E L+ + + S +G+LG V+G+M F + + +V S + G+ +L + L
Sbjct: 32 DAISENLTTIYIIYSNAPYIGLLGTVIGIMVTFYEMGLAGNIDVKSIVVGLSLALKATAL 91
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEG 212
GL V+IP+ +AYN + + +
Sbjct: 92 GLLVAIPALMAYNALLRKVSLLSNAYKA 119
>gi|282859224|ref|ZP_06268346.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Prevotella bivia JCVIHMP010]
gi|282588043|gb|EFB93226.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Prevotella bivia JCVIHMP010]
Length = 279
Score = 76.0 bits (186), Expect = 4e-12, Method: Composition-based stats.
Identities = 40/209 (19%), Positives = 89/209 (42%), Gaps = 17/209 (8%)
Query: 13 IFALFMQMGLAVKCIITLLF---IFSILSWSVIIQKSVNFITL--RRQFREFEQLFWSGQ 67
++ + G+ V I TLL SI ++ + T + +F + +
Sbjct: 60 VWGTIYKGGVVVPVIHTLLLTVLAMSI-------ERWLALKTAFGKGALPKFVENIKAAL 112
Query: 68 SLETVCKSLK--NHHNIGLAAIFMSAMSEWK--KSCDKGARSPIGIQDRIDRMMDVAIAR 123
+ + K+ + + +A + ++++ +K ++ +I + + A
Sbjct: 113 NKNDLAKATQLCDQQKGSVANVVKASLNAYKDMETGANANLKKSVKVAKIQQAHEEATQL 172
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA-GYYSNNVVSIPGIIESLISI 182
E+ +T L + ++ + G L G+LG V GM+ F ++A G +++ GI E+LI+
Sbjct: 173 EMPTLTMNLPIIATLVTLGTLTGLLGTVTGMIKSFSALASGGGADSAALSAGISEALINT 232
Query: 183 LLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
G+ S + ++YN F K ++
Sbjct: 233 AFGIATSWCAVVSYNYFSNKVDKLTYALD 261
>gi|57168821|ref|ZP_00367952.1| probable exbB/tolQ family transport protein Cj1628 [Campylobacter
coli RM2228]
gi|57019868|gb|EAL56551.1| probable exbB/tolQ family transport protein Cj1628 [Campylobacter
coli RM2228]
Length = 123
Score = 76.0 bits (186), Expect = 4e-12, Method: Composition-based stats.
Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVS-IPGIIESLISILL 184
+ I+E L+ + + S +G+LG V+G+M F + + +V S + G+ +L + L
Sbjct: 32 DAISENLTTIYIIYSNAPYIGLLGTVVGIMITFYEMGIAGNIDVKSIVVGLSLALKATAL 91
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQM 210
GL V+IP+ +AYN + +
Sbjct: 92 GLLVAIPALMAYNALLRKVSLLSNAY 117
>gi|83645410|ref|YP_433845.1| biopolymer transport protein [Hahella chejuensis KCTC 2396]
gi|83633453|gb|ABC29420.1| Biopolymer transport protein [Hahella chejuensis KCTC 2396]
Length = 221
Score = 76.0 bits (186), Expect = 4e-12, Method: Composition-based stats.
Identities = 29/191 (15%), Positives = 77/191 (40%), Gaps = 17/191 (8%)
Query: 40 SVIIQKSVNFITLRRQFRE-FEQLF---WSGQSLETVCKSLKNHHNIGLAAIFMSAMSEW 95
++ I++ V + R F +L L + ++ +A+I + +S
Sbjct: 28 AIAIERYVYLSIAKLSNRADFNKLIMLIGRKDYLNALKQA--KQSKTAMASIVEAGLS-- 83
Query: 96 KKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMM 155
+ ++ R D+I+ M+ + L + ++ +L ++++ L+G+LG ++G++
Sbjct: 84 -RLLNRQPR------DQIEYAMEEGLMEVLPRVEKRTQYLATLANIATLLGLLGTIIGLI 136
Query: 156 GFFQSIAGYYSNNVV--SIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGF 213
F ++A I ++ + GL +IP + + + + E
Sbjct: 137 DAFTAVANADPAEKANLLSQSISLAMNTTAFGLMTAIPLLLVHAILQTKTNEIVDSFETA 196
Query: 214 ANEFSAILSRQ 224
+ ++S +
Sbjct: 197 GIKIMNLISEK 207
>gi|86152288|ref|ZP_01070499.1| TonB system transport protein ExbB [Campylobacter jejuni subsp.
jejuni 260.94]
gi|86153030|ref|ZP_01071235.1| biopolymer transport exbB protein [Campylobacter jejuni subsp.
jejuni HB93-13]
gi|315125035|ref|YP_004067039.1| TonB system transport protein ExbB [Campylobacter jejuni subsp.
jejuni ICDCCJ07001]
gi|85840777|gb|EAQ58028.1| TonB system transport protein ExbB [Campylobacter jejuni subsp.
jejuni 260.94]
gi|85843915|gb|EAQ61125.1| biopolymer transport exbB protein [Campylobacter jejuni subsp.
jejuni HB93-13]
gi|315018757|gb|ADT66850.1| TonB system transport protein ExbB [Campylobacter jejuni subsp.
jejuni ICDCCJ07001]
Length = 123
Score = 76.0 bits (186), Expect = 4e-12, Method: Composition-based stats.
Identities = 24/88 (27%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVS-IPGIIESLISILL 184
+ I+E L+ + + S +G+LG V+G+M F + + +V S + G+ +L + L
Sbjct: 32 DAISENLTTIYIIYSNAPYIGLLGTVIGIMVTFYEMGLAGNIDVKSIVVGLSLALKATAL 91
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEG 212
GL V+IP+ +AYN + + +
Sbjct: 92 GLLVAIPALMAYNALLRKVSLLSNAYKA 119
>gi|83954257|ref|ZP_00962977.1| MotA/TolQ/ExbB proton channel family protein [Sulfitobacter sp.
NAS-14.1]
gi|83841294|gb|EAP80464.1| MotA/TolQ/ExbB proton channel family protein [Sulfitobacter sp.
NAS-14.1]
Length = 230
Score = 76.0 bits (186), Expect = 4e-12, Method: Composition-based stats.
Identities = 32/174 (18%), Positives = 69/174 (39%), Gaps = 19/174 (10%)
Query: 37 LSWSVIIQKSVNFITL----RRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAM 92
L+ +V I K F + E + W ++L + I ++ +
Sbjct: 31 LTLAVAIYKVWQFWRSAVGRHKALTEAVEA-WDRGDRPVAREALGRSKSYLAPVIKLAMV 89
Query: 93 SEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVL 152
S + +R+ + A ++ L S++ L+G+ G VL
Sbjct: 90 S--------NGKGSGAGVERLQAEAETRFA----KLETGFRLLDSVAQLAPLLGLFGTVL 137
Query: 153 GMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSK 204
GM+ F+S+ AG + + GI +L++ +GL V++P+++ + + +
Sbjct: 138 GMIEAFRSLQAAGSQVDPSILAGGIWVALLTTAVGLVVAMPTALILSWLEQRME 191
>gi|325518968|gb|EGC98500.1| biopolymer transport protein [Burkholderia sp. TJI49]
Length = 110
Score = 76.0 bits (186), Expect = 4e-12, Method: Composition-based stats.
Identities = 28/104 (26%), Positives = 49/104 (47%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQ 67
+ +S + LF+Q VK I+ +L + S+L+W+VI K + F LR + R + + +
Sbjct: 7 VQHLSPWDLFVQADAIVKAIMIVLALASLLTWAVIADKLIRFRELRARARRWSAALDTPE 66
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQD 111
L + +L+ A I+ + SEW S +G D
Sbjct: 67 RLRALADALRTQPADPFARIYAALGSEWDDSQRRGLARSPATFD 110
>gi|315453287|ref|YP_004073557.1| Biopolymer transport protein ExbB/tolQ family transport protein
[Helicobacter felis ATCC 49179]
gi|315132339|emb|CBY82967.1| Biopolymer transport protein ExbB/tolQ family transport protein
[Helicobacter felis ATCC 49179]
Length = 149
Score = 76.0 bits (186), Expect = 4e-12, Method: Composition-based stats.
Identities = 27/100 (27%), Positives = 47/100 (47%), Gaps = 2/100 (2%)
Query: 112 RIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSN--NV 169
RID + R ++T+ L+ L + S VG+LG +LG+M F ++ +
Sbjct: 42 RIDFSLYEDPDRLDMDLTKNLTMLYIIYSNAPYVGLLGTILGVMVTFYDMSTSVTGLDAK 101
Query: 170 VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQ 209
G+ +L + GL V+IP+ I YN F+ + +
Sbjct: 102 AITLGLSLALKATAFGLLVAIPTLIVYNAFLRKVDILSER 141
>gi|302036398|ref|YP_003796720.1| biopolymer transport protein Exbb [Candidatus Nitrospira defluvii]
gi|300604462|emb|CBK40794.1| Biopolymer transport protein ExbB [Candidatus Nitrospira defluvii]
Length = 143
Score = 76.0 bits (186), Expect = 4e-12, Method: Composition-based stats.
Identities = 23/98 (23%), Positives = 47/98 (47%), Gaps = 1/98 (1%)
Query: 112 RIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVS 171
R+D I +T++L +G++++ +G+LG VLG+M F ++ + V +
Sbjct: 36 RVDLTQFTDIQTFEMALTKRLVIIGTVAANAPYIGLLGTVLGIMMTFHTMGTSGTMAVNT 95
Query: 172 -IPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAM 208
+ G+ +L + +GL V+IP + N +
Sbjct: 96 IMIGLSLALKATAVGLLVAIPCVVMNNILRRRVTELLT 133
>gi|268679357|ref|YP_003303788.1| tonB-system energizer ExbB [Sulfurospirillum deleyianum DSM 6946]
gi|268617388|gb|ACZ11753.1| tonB-system energizer ExbB [Sulfurospirillum deleyianum DSM 6946]
Length = 142
Score = 76.0 bits (186), Expect = 4e-12, Method: Composition-based stats.
Identities = 30/106 (28%), Positives = 51/106 (48%), Gaps = 5/106 (4%)
Query: 115 RMMDVAIARELEEIT----EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSN-NV 169
R MDV + R +E + + L+ L +SS VG+LG V+G+M F + +
Sbjct: 35 RRMDVTMYRVMEILENDLTKNLTALSIISSNAPYVGLLGTVIGIMITFYDMGQAGEIESK 94
Query: 170 VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFAN 215
V + G+ +L + LGL V+IPS +AY+ + + +
Sbjct: 95 VILIGLSLALKATALGLVVAIPSLMAYSACLRKCDVLIAHWKAHQH 140
>gi|118474617|ref|YP_891484.1| TonB-system energizer ExbB [Campylobacter fetus subsp. fetus 82-40]
gi|261885185|ref|ZP_06009224.1| TonB-system energizer ExbB [Campylobacter fetus subsp. venerealis
str. Azul-94]
gi|118413843|gb|ABK82263.1| TonB-system energizer ExbB [Campylobacter fetus subsp. fetus 82-40]
Length = 142
Score = 76.0 bits (186), Expect = 4e-12, Method: Composition-based stats.
Identities = 24/85 (28%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVS-IPGIIESLISILLGL 186
+T+ L+FL + S VG+LG V G+M F + + N + + G+ +L + LG+
Sbjct: 55 LTKNLTFLYVIYSNAPYVGLLGTVCGIMITFYDMGASGNINANTIMMGLSLALKATALGI 114
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQME 211
V+IP+ YN + E
Sbjct: 115 AVAIPTLAIYNLLNRKVDILLAKFE 139
>gi|57238640|ref|YP_179771.1| TonB system transport protein ExbB [Campylobacter jejuni RM1221]
gi|57167444|gb|AAW36223.1| TonB system transport protein ExbB [Campylobacter jejuni RM1221]
gi|315059079|gb|ADT73408.1| Ferric siderophore transport system, biopolymer transport protein
ExbB [Campylobacter jejuni subsp. jejuni S3]
Length = 141
Score = 76.0 bits (186), Expect = 4e-12, Method: Composition-based stats.
Identities = 24/88 (27%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVS-IPGIIESLISILL 184
+ I+E L+ + + S +G+LG V+G+M F + + +V S + G+ +L + L
Sbjct: 50 DAISENLTTIYIIYSNAPYIGLLGTVIGIMVTFYEMGLAGNIDVKSIVVGLSLALKATAL 109
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEG 212
GL V+IP+ +AYN + + +
Sbjct: 110 GLLVAIPALMAYNALLRRVSLLSNAYKA 137
>gi|317052178|ref|YP_004113294.1| MotA/TolQ/ExbB proton channel [Desulfurispirillum indicum S5]
gi|316947262|gb|ADU66738.1| MotA/TolQ/ExbB proton channel [Desulfurispirillum indicum S5]
Length = 207
Score = 75.6 bits (185), Expect = 4e-12, Method: Composition-based stats.
Identities = 29/155 (18%), Positives = 63/155 (40%), Gaps = 13/155 (8%)
Query: 57 REFEQLFWSGQSLETVC-KSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDR 115
R+F + F + + + L L I S + + +
Sbjct: 41 RDFCRRFDNLGNRQQGYIDELCGTTTNPLTQIVASVVKTHAEHSQD-----------LRA 89
Query: 116 MMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVS-IPG 174
+ R E + + +++L ++ L+G++G ++GM+ FQ IA G
Sbjct: 90 EVAYLFHRNFERVNKHVTYLRLIAVISPLLGLMGTMVGMVRVFQEIAASAVPQQDMLAAG 149
Query: 175 IIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQ 209
I E++++ +LGL +++P+ + Y K F ++
Sbjct: 150 IWEAILTTILGLGIAVPTLVFYYVLSLKLKGFRIE 184
>gi|254409468|ref|ZP_05023249.1| transporter, MotA/TolQ/ExbB proton channel family, putative
[Microcoleus chthonoplastes PCC 7420]
gi|196183465|gb|EDX78448.1| transporter, MotA/TolQ/ExbB proton channel family, putative
[Microcoleus chthonoplastes PCC 7420]
Length = 196
Score = 75.6 bits (185), Expect = 4e-12, Method: Composition-based stats.
Identities = 42/200 (21%), Positives = 88/200 (44%), Gaps = 20/200 (10%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITL----RRQFREFEQLFWSGQSLETVCKSLKNHHNIG 83
+ L + SIL+ ++I+++ + + R RE L+ L+ + ++
Sbjct: 1 MLPLLVLSILAIALILERINFWRRVTQRQNRLMREVLHLYQQNPP--EAFLKLEQNSDLP 58
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
+A IF++A+ E K+ ++ ++ A+ EL + + ++ S
Sbjct: 59 IARIFLAAL-ELKR----------PTPEQFRLALESAVQAELPILKRFNTAFETIISVSP 107
Query: 144 LVGILGAVLGMMGFFQSI---AGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFI 200
L+G+LG +LG++ F ++ V GI E+LIS + GL V+I + I N F
Sbjct: 108 LLGLLGTILGLIDAFAALRIGDIGGQTTVGVTGGISEALISTVAGLSVAIATLIFANTFR 167
Query: 201 EDSKKFAMQMEGFANEFSAI 220
++ ++ + + I
Sbjct: 168 GLYRRQLALIQEYGGKLELI 187
>gi|57505501|ref|ZP_00371429.1| probable exbB/tolQ family transport protein Cj1628 [Campylobacter
upsaliensis RM3195]
gi|57016326|gb|EAL53112.1| probable exbB/tolQ family transport protein Cj1628 [Campylobacter
upsaliensis RM3195]
Length = 161
Score = 75.6 bits (185), Expect = 5e-12, Method: Composition-based stats.
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVS-IPGIIESLISILLGL 186
I+E L+ L + S +G+LG V+G+M F + +V S + G+ +L + LGL
Sbjct: 72 ISENLTILYIIYSNAPYIGLLGTVIGIMMTFYEMGVVGDIDVKSIVIGLSLALKATALGL 131
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQM 210
V+IPS +AYN + +
Sbjct: 132 LVAIPSLMAYNALLRKITLLSSAY 155
>gi|283957014|ref|ZP_06374486.1| putative exbB/tolQ family transport protein [Campylobacter jejuni
subsp. jejuni 1336]
gi|283791515|gb|EFC30312.1| putative exbB/tolQ family transport protein [Campylobacter jejuni
subsp. jejuni 1336]
Length = 141
Score = 75.6 bits (185), Expect = 5e-12, Method: Composition-based stats.
Identities = 24/88 (27%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVS-IPGIIESLISILL 184
+ I+E L+ + + S +G+LG V+G+M F + + +V S + G+ +L + L
Sbjct: 50 DAISENLTTIYIIYSNAPYIGLLGTVIGIMVTFYEMGLTGNIDVKSIVVGLSLALKATAL 109
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEG 212
GL V+IP+ +AYN + + +
Sbjct: 110 GLLVAIPALMAYNTLLRKVSLLSNAYKA 137
>gi|260910239|ref|ZP_05916916.1| MotA/TolQ/ExbB proton channel family protein [Prevotella sp. oral
taxon 472 str. F0295]
gi|260635743|gb|EEX53756.1| MotA/TolQ/ExbB proton channel family protein [Prevotella sp. oral
taxon 472 str. F0295]
Length = 276
Score = 75.6 bits (185), Expect = 5e-12, Method: Composition-based stats.
Identities = 43/208 (20%), Positives = 85/208 (40%), Gaps = 9/208 (4%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITL--RRQFREFEQLFWSG 66
+ I+ + GL V I TLL LS +++ + T +F +
Sbjct: 55 HPLDIWGTIYKGGLVVPVIQTLLLTVLALS----VERWLALRTAFGTGSLTKFVANIKAA 110
Query: 67 QSLETV--CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARE 124
+ + + L + +A + ++++ +K +I + + A E
Sbjct: 111 LNAKDFNRAQQLCDKQKGSVANVVSASLTAYKAMESVTGIKLSQKIAKIQQAHEEATQLE 170
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI-AGYYSNNVVSIPGIIESLISIL 183
+ + L L ++ + G L G+LG V GM+ FQ++ AG +++ GI E+LI+
Sbjct: 171 MPTLQMNLPILATLVTLGTLTGLLGTVTGMIKSFQALAAGGGGDSLALSAGISEALINTA 230
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQME 211
G+ S + I+Y F K ++
Sbjct: 231 FGITTSWFAVISYGFFTNKIDKLTYALD 258
>gi|330970457|gb|EGH70523.1| biopolymer transport protein ExbB [Pseudomonas syringae pv. aceris
str. M302273PT]
Length = 95
Score = 75.6 bits (185), Expect = 5e-12, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 152 LGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQM 210
G+M QSI S ++ ++ G I +L++ +G+ V++P+ + YN F+ K M
Sbjct: 1 WGIMEALQSIGVTGSASLEAVAGPIGHALVATGVGIAVAVPAVLIYNFFLRRLKLAVADM 60
Query: 211 EGFANEFSAILSR 223
+ FA++F A+ R
Sbjct: 61 DDFAHDFDALAQR 73
>gi|317181061|dbj|BAJ58847.1| biopolymer transport protein [Helicobacter pylori F32]
Length = 145
Score = 75.6 bits (185), Expect = 5e-12, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVS-IPGIIESLISILLGL 186
+T+ L+ L + S VG+LG VLG+M F + + + + G+ +L + LGL
Sbjct: 57 LTKNLTILYVIYSNAPYVGLLGTVLGIMVIFYDMGVSGGMDAKTIMVGLSLALKATALGL 116
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQ 209
V+IP+ IAYN + S + +
Sbjct: 117 AVAIPTLIAYNSLLRKSDVLSEK 139
>gi|305432438|ref|ZP_07401600.1| TonB-system energizer ExbB [Campylobacter coli JV20]
gi|304444477|gb|EFM37128.1| TonB-system energizer ExbB [Campylobacter coli JV20]
Length = 145
Score = 75.6 bits (185), Expect = 5e-12, Method: Composition-based stats.
Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVS-IPGIIESLISILL 184
+ I+E L+ + + S +G+LG V+G+M F + + +V S + G+ +L + L
Sbjct: 54 DAISENLTTIYIIYSNAPYIGLLGTVVGIMITFYEMGIAGNIDVKSIVVGLSLALKATAL 113
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQM 210
GL V+IP+ +AYN + +
Sbjct: 114 GLLVAIPALMAYNALLRKVSLLSNAY 139
>gi|86149270|ref|ZP_01067501.1| TonB system transport protein ExbB [Campylobacter jejuni subsp.
jejuni CF93-6]
gi|88596266|ref|ZP_01099503.1| TonB system transport protein ExbB [Campylobacter jejuni subsp.
jejuni 84-25]
gi|157415848|ref|YP_001483104.1| ExbB/TolQ family transport protein [Campylobacter jejuni subsp.
jejuni 81116]
gi|218563217|ref|YP_002344997.1| putative exbB/tolQ family transport protein [Campylobacter jejuni
subsp. jejuni NCTC 11168]
gi|85840052|gb|EAQ57310.1| TonB system transport protein ExbB [Campylobacter jejuni subsp.
jejuni CF93-6]
gi|88191107|gb|EAQ95079.1| TonB system transport protein ExbB [Campylobacter jejuni subsp.
jejuni 84-25]
gi|112360924|emb|CAL35725.1| putative exbB/tolQ family transport protein [Campylobacter jejuni
subsp. jejuni NCTC 11168]
gi|157386812|gb|ABV53127.1| putative ExbB/TolQ family transport protein [Campylobacter jejuni
subsp. jejuni 81116]
gi|284926823|gb|ADC29175.1| exbB/tolQ family transport protein [Campylobacter jejuni subsp.
jejuni IA3902]
gi|315927624|gb|EFV06955.1| tonB-system energizer ExbB [Campylobacter jejuni subsp. jejuni
DFVF1099]
gi|315929030|gb|EFV08271.1| tonB-system energizer ExbB [Campylobacter jejuni subsp. jejuni 305]
Length = 141
Score = 75.6 bits (185), Expect = 5e-12, Method: Composition-based stats.
Identities = 24/88 (27%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVS-IPGIIESLISILL 184
+ I+E L+ + + S +G+LG V+G+M F + + +V S + G+ +L + L
Sbjct: 50 DAISENLTTIYIIYSNAPYIGLLGTVIGIMVTFYEMGLAGNIDVKSIVVGLSLALKATAL 109
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEG 212
GL V+IP+ +AYN + + +
Sbjct: 110 GLLVAIPALMAYNALLRKVSLLSNAYKA 137
>gi|207109138|ref|ZP_03243300.1| biopolymer transport protein (exbB) [Helicobacter pylori
HPKX_438_CA4C1]
Length = 143
Score = 75.6 bits (185), Expect = 5e-12, Method: Composition-based stats.
Identities = 26/84 (30%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVS-IPGIIESLISILLGL 186
+T+ L+ L + S VG+LG VLG+M F + + + + G+ +L + LGL
Sbjct: 58 LTKNLTILYVIYSNAPYVGLLGTVLGIMVIFYDMGVSGGMDAKTIMVGLSLALKATALGL 117
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQM 210
V+IP+ IAYN + S + +
Sbjct: 118 AVAIPTLIAYNSLLRKSDVLSENL 141
>gi|158336547|ref|YP_001517721.1| MotA/TolQ/ExbB family proton channel protein [Acaryochloris marina
MBIC11017]
gi|158306788|gb|ABW28405.1| MotA/TolQ/ExbB family proton channel, putative [Acaryochloris
marina MBIC11017]
Length = 217
Score = 75.6 bits (185), Expect = 5e-12, Method: Composition-based stats.
Identities = 42/211 (19%), Positives = 84/211 (39%), Gaps = 18/211 (8%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSL---KNHHNI 82
++ L +FS+++ +++I++ + + L R + L+ V +L +
Sbjct: 12 IVMLPLMVFSLIATALVIERLIFWTRLNRNQLRIVKRTLQLYRLDNVYDALGYVQEQAKY 71
Query: 83 GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAG 142
+A IF++A+S D ++ EL + + ++ S
Sbjct: 72 PIARIFLAALS-----------LEEPTPDEFRLALESEAQAELPTLKRFTTVFDTIISIA 120
Query: 143 LLVGILGAVLGMMGFFQSIAGY---YSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKF 199
L+G+LG VLG++ F S+ S GI +LIS GL V+I + I N F
Sbjct: 121 PLLGLLGTVLGLINSFSSLDMGNIGGSETAGVTGGISTALISTAAGLIVAISTLIFANAF 180
Query: 200 IEDSKKFAMQMEGFANEFSAIL-SRQTEGNI 229
++ ++ + + R G +
Sbjct: 181 RSLYQRQLAFIQEHGGQLELLYRHRYERGRV 211
>gi|327404527|ref|YP_004345365.1| outer membrane transport energization protein ExbB [Fluviicola
taffensis DSM 16823]
gi|327320035|gb|AEA44527.1| outer membrane transport energization protein ExbB [Fluviicola
taffensis DSM 16823]
Length = 251
Score = 75.6 bits (185), Expect = 5e-12, Method: Composition-based stats.
Identities = 32/188 (17%), Positives = 74/188 (39%), Gaps = 10/188 (5%)
Query: 38 SWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKK 97
+ VII++ + ++ L + +L+ + S +
Sbjct: 69 TLYVIIERFRYIRRM---------SVYNANLLNDIRMNLEKGNIQDALNTVQRDQSAYGS 119
Query: 98 SCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGF 157
+G ++ I+ MD E+ ++ + + LG ++ G +G + G++
Sbjct: 120 VVAEGIQTIGRPVSEIESNMDKVANIEIGKMEKGMGVLGLIAGIAPTFGFIGTIAGVIKI 179
Query: 158 FQSIAGYYSNNVVSI-PGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANE 216
F +I+ + ++ +I G+ E +IS GL V I + AY+ + ++++
Sbjct: 180 FYNISISENVSIGNISGGLYEKMISSGAGLTVGIIAYSAYHILNAMIDNYTLKIQSTNLG 239
Query: 217 FSAILSRQ 224
F I+ R
Sbjct: 240 FINIIQRP 247
>gi|167006166|ref|ZP_02271924.1| TonB system transport protein ExbB [Campylobacter jejuni subsp.
jejuni 81-176]
Length = 141
Score = 75.6 bits (185), Expect = 5e-12, Method: Composition-based stats.
Identities = 24/88 (27%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVS-IPGIIESLISILL 184
+ I+E L+ + + S +G+LG V+G+M F + + +V S + G+ +L + L
Sbjct: 50 DAISENLTTIYIIYSNAPYIGLLGTVIGIMVTFYEMGLAGNIDVKSIVVGLSLALKATAL 109
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEG 212
GL V+IP+ +AYN + + +
Sbjct: 110 GLLVAIPALMAYNALLRKVSLLSNAYKA 137
>gi|317178370|dbj|BAJ56158.1| biopolymer transport protein [Helicobacter pylori F30]
Length = 145
Score = 75.6 bits (185), Expect = 6e-12, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVS-IPGIIESLISILLGL 186
+T+ L+ L + S VG+LG VLG+M F + + + + G+ +L + LGL
Sbjct: 57 LTKNLTILYVIYSNAPYVGLLGTVLGIMVIFYDMGVSGGMDAKTIMVGLSLALKATALGL 116
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQ 209
V+IP+ IAYN + S + +
Sbjct: 117 AVAIPTLIAYNSLLRKSDVLSEK 139
>gi|308183448|ref|YP_003927575.1| biopolymer transport protein [Helicobacter pylori PeCan4]
gi|308065633|gb|ADO07525.1| biopolymer transport protein [Helicobacter pylori PeCan4]
Length = 145
Score = 75.6 bits (185), Expect = 6e-12, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVS-IPGIIESLISILLGL 186
+T+ L+ L + S VG+LG VLG+M F + + + + G+ +L + LGL
Sbjct: 57 LTKNLTILYVIYSNAPYVGLLGTVLGIMVIFYDMGVSGGMDAKTIMVGLSLALKATALGL 116
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQ 209
V+IP+ IAYN + S + +
Sbjct: 117 AVAIPTLIAYNSLLRKSDVLSEK 139
>gi|242310684|ref|ZP_04809839.1| predicted protein [Helicobacter pullorum MIT 98-5489]
gi|239523082|gb|EEQ62948.1| predicted protein [Helicobacter pullorum MIT 98-5489]
Length = 190
Score = 75.6 bits (185), Expect = 6e-12, Method: Composition-based stats.
Identities = 21/108 (19%), Positives = 48/108 (44%), Gaps = 1/108 (0%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VS 171
+ M+ +I + +++ T L+FLG ++S +G+ G V+ ++ F + + V
Sbjct: 78 TESMLQYSINKAIKDSTAGLTFLGIVASTAPFIGLFGTVVEILEAFSKLGMDSKATLDVI 137
Query: 172 IPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
P I ++LI+ G+ +IP+ + ++ N +
Sbjct: 138 APVISKALIATAAGILTAIPAYSFNLVLKRKVFELNTYLQLQINVLMS 185
>gi|296273867|ref|YP_003656498.1| MotA/TolQ/ExbB proton channel [Arcobacter nitrofigilis DSM 7299]
gi|296098041|gb|ADG93991.1| MotA/TolQ/ExbB proton channel [Arcobacter nitrofigilis DSM 7299]
Length = 186
Score = 75.2 bits (184), Expect = 6e-12, Method: Composition-based stats.
Identities = 19/104 (18%), Positives = 44/104 (42%), Gaps = 1/104 (0%)
Query: 117 MDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-VVSIPGI 175
+ +++ +E LS+L +SS +G+ G V+G++ F + + P I
Sbjct: 81 LHACEISIIKDASEGLSWLSIVSSTSPFIGLFGTVVGILESFAKFSTQSKVGFSIIAPAI 140
Query: 176 IESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
E+L++ G+ V+I + + + ++ + A
Sbjct: 141 SEALVATAGGIFVAIFAYTFHQILTRKVYELNTYLKAQSEILIA 184
>gi|89093289|ref|ZP_01166239.1| MotA/TolQ/ExbB proton channel family protein [Oceanospirillum sp.
MED92]
gi|89082585|gb|EAR61807.1| MotA/TolQ/ExbB proton channel family protein [Oceanospirillum sp.
MED92]
Length = 192
Score = 75.2 bits (184), Expect = 6e-12, Method: Composition-based stats.
Identities = 40/191 (20%), Positives = 75/191 (39%), Gaps = 28/191 (14%)
Query: 27 IITLLFIFSILSWSVIIQKSV-NFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLA 85
++ +L +SIL S+I + + T R F + + G V + L + GL
Sbjct: 10 VVWILLAYSILGISIIAGRYLHLLFTHRVNFNHPVEQWPEGPEKRLVIQLLNKSNTQGLH 69
Query: 86 AIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLV 145
A I +EL+ + + ++ L+
Sbjct: 70 TDLHEAAIHH-------------------------IHKELKPFESGMKTVSILAQTAPLL 104
Query: 146 GILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDS 203
G+LG + GM+ FQ I AG + + GI E++++ +GL V+IP I + +
Sbjct: 105 GLLGTITGMIKAFQVIENAGGAVDAMALAGGIWEAMLTTGIGLSVAIPLLILLHFWESAV 164
Query: 204 KKFAMQMEGFA 214
+F +++ A
Sbjct: 165 TRFHWRLQRAA 175
>gi|303236036|ref|ZP_07322639.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Prevotella disiens FB035-09AN]
gi|302483909|gb|EFL46901.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Prevotella disiens FB035-09AN]
Length = 279
Score = 75.2 bits (184), Expect = 6e-12, Method: Composition-based stats.
Identities = 42/209 (20%), Positives = 86/209 (41%), Gaps = 17/209 (8%)
Query: 13 IFALFMQMGLAVKCIITLLF---IFSILSWSVIIQKSVNFITL--RRQFREFEQLFWSGQ 67
++ + G+ V I TLL SI ++ + T + +F
Sbjct: 60 VWGTIFKGGIVVPVIHTLLLTVLAMSI-------ERWLALKTAFGKGALPKFVVNIKQAL 112
Query: 68 SLETVCKS--LKNHHNIGLAAIFMSAMSEWK--KSCDKGARSPIGIQDRIDRMMDVAIAR 123
S + K+ L + +A + ++++ + +S +I + + A
Sbjct: 113 SANDMAKANQLCDKQKGSVANVVKASLNAYASMESGANANLQKAQKIAKIQQAHEEATQL 172
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA-GYYSNNVVSIPGIIESLISI 182
E+ +T L + ++ + G L G+LG V GM+ F ++A G +++ GI E+LI+
Sbjct: 173 EMPTLTMNLPIIATLVTLGTLTGLLGTVTGMIKSFSALASGGGADSAALSAGISEALINT 232
Query: 183 LLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
G+ S + ++YN F K ++
Sbjct: 233 AFGIATSWCAVVSYNYFSNKVDKLTYALD 261
>gi|283780239|ref|YP_003370994.1| MotA/TolQ/ExbB proton channel [Pirellula staleyi DSM 6068]
gi|283438692|gb|ADB17134.1| MotA/TolQ/ExbB proton channel [Pirellula staleyi DSM 6068]
Length = 274
Score = 75.2 bits (184), Expect = 6e-12, Method: Composition-based stats.
Identities = 39/194 (20%), Positives = 80/194 (41%), Gaps = 17/194 (8%)
Query: 43 IQKSVNFITLRR----QFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKS 98
++ ++ R + F + GQ +L + +A +F +A +W ++
Sbjct: 80 FERFISLRRGRVIPKPFVKRFIEQLREGQLDREKAVALCEQNKSPVAVVFAAAAKKWGRT 139
Query: 99 CDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFF 158
+ ++ + +R+ + L L +S L+G+LG VLGM+ F
Sbjct: 140 AVEVEQAILDSGERVTNQLR-----------RHLRLLNGISQVSPLLGLLGTVLGMISSF 188
Query: 159 QSIAGYYSNNV--VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANE 216
+IA ++ GI E+LI+ G+ V+IP+ IAY F+ + +++ +
Sbjct: 189 NAIATAEASGQREALAGGIAEALITTAAGMLVAIPALIAYLYFVGRVDQHITEIDMLGQQ 248
Query: 217 FSAILSRQTEGNIS 230
++S S
Sbjct: 249 VVELISSDALEQSS 262
>gi|317011538|gb|ADU85285.1| biopolymer transport protein [Helicobacter pylori SouthAfrica7]
Length = 145
Score = 75.2 bits (184), Expect = 6e-12, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVS-IPGIIESLISILLGL 186
+T+ L+ L + S VG+LG VLG+M F + + + + G+ +L + LGL
Sbjct: 57 LTKNLTILYVIYSNAPYVGLLGTVLGIMVIFYDMGVSGGMDAKTIMVGLSLALKATALGL 116
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQ 209
V+IP+ IAYN + S + +
Sbjct: 117 AVAIPTLIAYNSLLRKSDVLSEK 139
>gi|331019522|gb|EGH99578.1| TonB system transport protein ExbB [Pseudomonas syringae pv.
lachrymans str. M302278PT]
Length = 102
Score = 75.2 bits (184), Expect = 6e-12, Method: Composition-based stats.
Identities = 19/74 (25%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 151 VLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQ 209
V G+M + I+ S ++ ++ G I +L++ +G+ V++P+ + YN F+ K A
Sbjct: 1 VWGIMSALKGISAAGSASLETVAGPIGAALVATGVGIAVAVPAVLVYNYFLRRLKLTAAD 60
Query: 210 MEGFANEFSAILSR 223
++ FA++F ++ +
Sbjct: 61 LDDFAHDFYSLAQK 74
>gi|217033655|ref|ZP_03439083.1| hypothetical protein HP9810_899g91 [Helicobacter pylori 98-10]
gi|216944001|gb|EEC23435.1| hypothetical protein HP9810_899g91 [Helicobacter pylori 98-10]
gi|317178078|dbj|BAJ55867.1| biopolymer transport protein [Helicobacter pylori F16]
Length = 145
Score = 75.2 bits (184), Expect = 6e-12, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVS-IPGIIESLISILLGL 186
+T+ L+ L + S VG+LG VLG+M F + + + + G+ +L + LGL
Sbjct: 57 LTKNLTILYVIYSNAPYVGLLGTVLGIMVIFYDMGVSGGMDAKTIMVGLSLALKATALGL 116
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQ 209
V+IP+ IAYN + S + +
Sbjct: 117 AVAIPTLIAYNSLLRKSDVLSEK 139
>gi|317182584|dbj|BAJ60368.1| biopolymer transport protein [Helicobacter pylori F57]
Length = 145
Score = 75.2 bits (184), Expect = 6e-12, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVS-IPGIIESLISILLGL 186
+T+ L+ L + S VG+LG VLG+M F + + + + G+ +L + LGL
Sbjct: 57 LTKNLTILYVIYSNAPYVGLLGTVLGIMVIFYDMGVSGGMDAKTIMVGLSLALKATALGL 116
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQ 209
V+IP+ IAYN + S + +
Sbjct: 117 AVAIPTLIAYNSLLRKSDVLSEK 139
>gi|317010020|gb|ADU80600.1| biopolymer transport protein [Helicobacter pylori India7]
Length = 145
Score = 75.2 bits (184), Expect = 7e-12, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVS-IPGIIESLISILLGL 186
+T+ L+ L + S VG+LG VLG+M F + + + + G+ +L + LGL
Sbjct: 57 LTKNLTILYVIYSNAPYVGLLGTVLGIMVIFYDMGVSGGMDAKTIMVGLSLALKATALGL 116
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQ 209
V+IP+ IAYN + S + +
Sbjct: 117 AVAIPTLIAYNSLLRKSDVLSEK 139
>gi|308064115|gb|ADO06002.1| biopolymer transport protein [Helicobacter pylori Sat464]
Length = 145
Score = 75.2 bits (184), Expect = 7e-12, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVS-IPGIIESLISILLGL 186
+T+ L+ L + S VG+LG VLG+M F + + + + G+ +L + LGL
Sbjct: 57 LTKNLTILYVIYSNAPYVGLLGTVLGIMVIFYDMGVSGGMDAKTIMVGLSLALKATALGL 116
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQ 209
V+IP+ IAYN + S + +
Sbjct: 117 AVAIPTLIAYNGLLRKSDVLSEK 139
>gi|16272211|ref|NP_438422.1| transport protein ExbB [Haemophilus influenzae Rd KW20]
gi|68248860|ref|YP_247972.1| transport protein ExbB [Haemophilus influenzae 86-028NP]
gi|145628574|ref|ZP_01784374.1| transport protein ExbB [Haemophilus influenzae 22.1-21]
gi|145639835|ref|ZP_01795436.1| transport protein ExbB [Haemophilus influenzae PittII]
gi|145640177|ref|ZP_01795761.1| excinuclease ABC subunit A [Haemophilus influenzae R3021]
gi|148827396|ref|YP_001292149.1| transport protein ExbB [Haemophilus influenzae PittGG]
gi|229844955|ref|ZP_04465092.1| transport protein ExbB [Haemophilus influenzae 6P18H1]
gi|229846340|ref|ZP_04466448.1| transport protein ExbB [Haemophilus influenzae 7P49H1]
gi|260580864|ref|ZP_05848689.1| tonB-system energizer ExbB [Haemophilus influenzae RdAW]
gi|260582863|ref|ZP_05850648.1| tonB-system energizer ExbB [Haemophilus influenzae NT127]
gi|270720372|ref|ZP_06223386.1| Biopolymer transport exbB protein [Haemophilus influenzae HK1212]
gi|319775876|ref|YP_004138364.1| transport protein ExbB [Haemophilus influenzae F3047]
gi|319896588|ref|YP_004134781.1| transport protein exbb [Haemophilus influenzae F3031]
gi|329123721|ref|ZP_08252281.1| TonB family auxiliary protein ExbB [Haemophilus aegyptius ATCC
11116]
gi|1169576|sp|P43008|EXBB_HAEIN RecName: Full=Biopolymer transport protein exbB
gi|1573219|gb|AAC21919.1| biopolymer transport protein (exbB) [Haemophilus influenzae Rd
KW20]
gi|68057059|gb|AAX87312.1| transport protein ExbB [Haemophilus influenzae 86-028NP]
gi|144979044|gb|EDJ88730.1| transport protein ExbB [Haemophilus influenzae 22.1-21]
gi|145271053|gb|EDK10969.1| transport protein ExbB [Haemophilus influenzae PittII]
gi|145274763|gb|EDK14625.1| excinuclease ABC subunit A [Haemophilus influenzae 22.4-21]
gi|148718638|gb|ABQ99765.1| transport protein ExbB [Haemophilus influenzae PittGG]
gi|229810433|gb|EEP46151.1| transport protein ExbB [Haemophilus influenzae 7P49H1]
gi|229812089|gb|EEP47781.1| transport protein ExbB [Haemophilus influenzae 6P18H1]
gi|260092487|gb|EEW76425.1| tonB-system energizer ExbB [Haemophilus influenzae RdAW]
gi|260094076|gb|EEW77979.1| tonB-system energizer ExbB [Haemophilus influenzae NT127]
gi|270315314|gb|EFA27619.1| Biopolymer transport exbB protein [Haemophilus influenzae HK1212]
gi|301168907|emb|CBW28501.1| transport protein ExbB [Haemophilus influenzae 10810]
gi|309750331|gb|ADO80315.1| Biopolymer transport protein ExbB [Haemophilus influenzae R2866]
gi|309972586|gb|ADO95787.1| Biopolymer transport protein ExbB [Haemophilus influenzae R2846]
gi|317432090|emb|CBY80441.1| transport protein ExbB [Haemophilus influenzae F3031]
gi|317450467|emb|CBY86683.1| transport protein ExbB [Haemophilus influenzae F3047]
gi|327469920|gb|EGF15385.1| TonB family auxiliary protein ExbB [Haemophilus aegyptius ATCC
11116]
Length = 150
Score = 75.2 bits (184), Expect = 7e-12, Method: Composition-based stats.
Identities = 18/79 (22%), Positives = 38/79 (48%), Gaps = 2/79 (2%)
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYS--NNVVSIPGIIESLISILLG 185
+ ++ + ++ + VG+LG V+G++ F I + V + + +L + LG
Sbjct: 56 LNRNMTVISTIGANAPYVGLLGTVIGILLTFYQIGHGGGDIDPSVIMLHLSLALKATALG 115
Query: 186 LCVSIPSSIAYNKFIEDSK 204
+ V+IPS + YN +
Sbjct: 116 ILVAIPSMVFYNGLGRKVE 134
>gi|207092513|ref|ZP_03240300.1| biopolymer transport protein (exbB) [Helicobacter pylori
HPKX_438_AG0C1]
Length = 146
Score = 75.2 bits (184), Expect = 7e-12, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVS-IPGIIESLISILLGL 186
+T+ L+ L + S VG+LG VLG+M F + + + + G+ +L + LGL
Sbjct: 58 LTKNLTILYVIYSNAPYVGLLGTVLGIMVIFYDMGVSGGMDAKTIMVGLSLALKATALGL 117
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQ 209
V+IP+ IAYN + S + +
Sbjct: 118 AVAIPTLIAYNSLLRKSDVLSEK 140
>gi|308062623|gb|ADO04511.1| biopolymer transport protein [Helicobacter pylori Cuz20]
Length = 145
Score = 75.2 bits (184), Expect = 7e-12, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVS-IPGIIESLISILLGL 186
+T+ L+ L + S VG+LG VLG+M F + + + + G+ +L + LGL
Sbjct: 57 LTKNLTILYVIYSNAPYVGLLGTVLGIMVIFYDMGMSGGMDAKTIMVGLSLALKATALGL 116
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQ 209
V+IP+ IAYN + S + +
Sbjct: 117 AVAIPTLIAYNSLLRKSDVLSEK 139
>gi|83943099|ref|ZP_00955559.1| MotA/TolQ/ExbB proton channel family protein [Sulfitobacter sp.
EE-36]
gi|83846107|gb|EAP83984.1| MotA/TolQ/ExbB proton channel family protein [Sulfitobacter sp.
EE-36]
Length = 230
Score = 75.2 bits (184), Expect = 7e-12, Method: Composition-based stats.
Identities = 33/174 (18%), Positives = 69/174 (39%), Gaps = 19/174 (10%)
Query: 37 LSWSVIIQKSVNFITL----RRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAM 92
L+ +V I K F + E + W ++L + I M+ +
Sbjct: 31 LTLAVAIYKVWQFWRSAVGRHKALTEAVEA-WDRGDRPVAREALGRSKSYLAPVIKMAMV 89
Query: 93 SEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVL 152
S + +R+ + A ++ L S++ L+G+ G VL
Sbjct: 90 S--------NGKGSGAGVERLQAEAETRFA----KLETGFRLLDSVAQLAPLLGLFGTVL 137
Query: 153 GMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSK 204
GM+ F+S+ AG + + GI +L++ +GL V++P+++ + + +
Sbjct: 138 GMIEAFRSLQAAGSQVDPSILAGGIWVALLTTAVGLVVAMPTALILSWLEQRME 191
>gi|261840053|gb|ACX99818.1| biopolymer transport ExbB protein; putative membrane protein
[Helicobacter pylori 52]
Length = 140
Score = 75.2 bits (184), Expect = 7e-12, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVS-IPGIIESLISILLGL 186
+T+ L+ L + S VG+LG VLG+M F + + + + G+ +L + LGL
Sbjct: 52 LTKNLTILYVIYSNAPYVGLLGTVLGIMVIFYDMGVSGGMDAKTIMVGLSLALKATALGL 111
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQ 209
V+IP+ IAYN + S + +
Sbjct: 112 AVAIPTLIAYNSLLRKSDVLSEK 134
>gi|113460836|ref|YP_718903.1| biopolymer transport protein [Haemophilus somnus 129PT]
gi|170717321|ref|YP_001784432.1| TonB-system energizer ExbB type-2 [Haemophilus somnus 2336]
gi|112822879|gb|ABI24968.1| outer membrane transport energization protein ExbB [Haemophilus
somnus 129PT]
gi|168825450|gb|ACA30821.1| TonB-system energizer ExbB type-2 [Haemophilus somnus 2336]
Length = 151
Score = 75.2 bits (184), Expect = 7e-12, Method: Composition-based stats.
Identities = 17/79 (21%), Positives = 37/79 (46%), Gaps = 2/79 (2%)
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYS--NNVVSIPGIIESLISILLG 185
+ L+ + ++ S VG+LG V+G++ F + + + + +L + +G
Sbjct: 56 LNRHLTIISTIGSNAPYVGLLGTVIGILLTFYELGNSGGDIDAAAIMLNLSLALKATAVG 115
Query: 186 LCVSIPSSIAYNKFIEDSK 204
+ V+IPS + YN +
Sbjct: 116 ILVAIPSMVFYNGLGRKVE 134
>gi|332674139|gb|AEE70956.1| TonB-system energizer ExbB [Helicobacter pylori 83]
Length = 145
Score = 75.2 bits (184), Expect = 7e-12, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVS-IPGIIESLISILLGL 186
+T+ L+ L + S VG+LG VLG+M F + + + + G+ +L + LGL
Sbjct: 57 LTKNLTILYVIYSNAPYVGLLGTVLGIMVIFYDMGVSGGMDAKTIMVGLSLALKATALGL 116
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQ 209
V+IP+ IAYN + S + +
Sbjct: 117 AVAIPTLIAYNSLLRKSDVLSEK 139
>gi|153952311|ref|YP_001398906.1| TonB system transport protein ExbB [Campylobacter jejuni subsp.
doylei 269.97]
gi|152939757|gb|ABS44498.1| TonB system transport protein ExbB [Campylobacter jejuni subsp.
doylei 269.97]
Length = 141
Score = 75.2 bits (184), Expect = 7e-12, Method: Composition-based stats.
Identities = 24/88 (27%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVS-IPGIIESLISILL 184
+ I+E L+ + + S +G+LG V+G+M F + + +V S + G+ +L + L
Sbjct: 50 DAISENLTTIYIIYSNAPYIGLLGTVIGIMVTFYEMGLAGNIDVKSIVVGLSLALKATAL 109
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEG 212
GL V+IP+ +AYN + + +
Sbjct: 110 GLLVAIPALMAYNALLRKISLLSNAYKA 137
>gi|87311604|ref|ZP_01093722.1| probable TolQ [Blastopirellula marina DSM 3645]
gi|87285726|gb|EAQ77642.1| probable TolQ [Blastopirellula marina DSM 3645]
Length = 238
Score = 75.2 bits (184), Expect = 7e-12, Method: Composition-based stats.
Identities = 35/185 (18%), Positives = 70/185 (37%), Gaps = 13/185 (7%)
Query: 56 FREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRI-- 113
R E+ F S + +++ G + + ++ + A + ++D
Sbjct: 54 MRVAEKRFRSEADQDAFLDAVEEPLLRGNYSAAEELCEDDSRAVPQLALLAMHMRDNSYA 113
Query: 114 ---DRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA----GYYS 166
M+D L ++ +LS++ ++ +VG+LG V GMMG F +A G
Sbjct: 114 QIKQMMLDRFQRDVLSDLEYRLSWVYTVIKGAPMVGLLGTVTGMMGAFGKLAAGESGGAD 173
Query: 167 NNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFA----MQMEGFANEFSAILS 222
I +LI+ GL ++IP +K + + F ++
Sbjct: 174 IATQMAEDISLALITTAAGLAIAIPLVFCTASINVRIRKMEDLVGVGVTRFLGALRERMN 233
Query: 223 RQTEG 227
R++E
Sbjct: 234 RESEA 238
>gi|308185090|ref|YP_003929223.1| biopolymer transport protein [Helicobacter pylori SJM180]
gi|308061010|gb|ADO02906.1| biopolymer transport protein [Helicobacter pylori SJM180]
gi|317013126|gb|ADU83734.1| biopolymer transport protein [Helicobacter pylori Lithuania75]
Length = 145
Score = 75.2 bits (184), Expect = 7e-12, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVS-IPGIIESLISILLGL 186
+T+ L+ L + S VG+LG VLG+M F + + + + G+ +L + LGL
Sbjct: 57 LTKNLTILYVIFSNAPYVGLLGTVLGIMVIFYDMGMSGGMDAKTIMVGLSLALKATALGL 116
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQ 209
V+IP+ IAYN + S + +
Sbjct: 117 AVAIPTLIAYNSLLRKSDVLSEK 139
>gi|281422562|ref|ZP_06253561.1| MotA/TolQ/ExbB proton channel family protein [Prevotella copri DSM
18205]
gi|281403386|gb|EFB34066.1| MotA/TolQ/ExbB proton channel family protein [Prevotella copri DSM
18205]
Length = 278
Score = 75.2 bits (184), Expect = 7e-12, Method: Composition-based stats.
Identities = 45/218 (20%), Positives = 94/218 (43%), Gaps = 13/218 (5%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITL--RRQFREF 59
+ G+ I+ + G+ V I TLL ++ I++ + T +F
Sbjct: 48 QDPGVQDHPADIWGTIYKGGVIVPVIHTLLLTV----LAMTIERWLALKTATGTGALPKF 103
Query: 60 EQLFWSGQSLETVCKS--LKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDR-- 115
+ + K+ L N +A + M++++ + KS + GA + + ++ +
Sbjct: 104 VANIKAALNANDFAKAEQLCNKQRGTVANVVMASLNAY-KSMESGANASLKKAQKVAKIQ 162
Query: 116 -MMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP- 173
+ A E+ +T L + ++ + G L G+LG V GM+ FQ++ + ++
Sbjct: 163 QAHEEATQLEMPTLTMNLPIIATIVTLGTLTGLLGTVTGMIKSFQAMGEGGGADSAALSV 222
Query: 174 GIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
GI E+LI+ G+ S + ++YN F K ++
Sbjct: 223 GISEALINTAFGILTSWCAVVSYNTFTNKVDKLTYALD 260
>gi|188528128|ref|YP_001910815.1| biopolymer transport protein (exbB) [Helicobacter pylori Shi470]
gi|188144368|gb|ACD48785.1| biopolymer transport protein (exbB) [Helicobacter pylori Shi470]
Length = 145
Score = 75.2 bits (184), Expect = 7e-12, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVS-IPGIIESLISILLGL 186
+T+ L+ L + S VG+LG VLG+M F + + + + G+ +L + LGL
Sbjct: 57 LTKNLTILYVIYSNAPYVGLLGTVLGIMVIFYDMGVSGGMDAKTIMVGLSLALKATALGL 116
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQ 209
V+IP+ IAYN + S + +
Sbjct: 117 AVAIPTLIAYNGLLRKSDVLSEK 139
>gi|254505844|ref|ZP_05117989.1| biopolymer transport protein ExbB1 [Vibrio parahaemolyticus 16]
gi|219551067|gb|EED28047.1| biopolymer transport protein ExbB1 [Vibrio parahaemolyticus 16]
Length = 235
Score = 74.8 bits (183), Expect = 7e-12, Method: Composition-based stats.
Identities = 35/195 (17%), Positives = 72/195 (36%), Gaps = 26/195 (13%)
Query: 28 ITLLFIFSILSWSVIIQKSVN----FITLRRQFREFEQLFW--SGQSLETVCKSLKNHHN 81
L I S L+ +I ++ +R R + +GQ +E + + L
Sbjct: 15 AWPLIICSALTVMIITERLFQVIISLGVGKRAIRSELKTISPTNGQQIEQLAEKLSPRRP 74
Query: 82 I---GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSM 138
+ G+A + A + KS + A + + ++ L L +
Sbjct: 75 LLYKGVAMLL--AHHSFSKSLREDAAGMW-------------LQEKRHQLNSGLRLLTLI 119
Query: 139 SSAGLLVGILGAVLGMMGFFQSIAGYYSNNV--VSIPGIIESLISILLGLCVSIPSSIAY 196
L+G+LG VLG++ F+ +A N G+ ++ + GL +++P+
Sbjct: 120 GVISPLIGLLGTVLGLIEMFKGVAASTGNITPNDLADGLGLAMRTTAAGLLIALPAIAGA 179
Query: 197 NKFIEDSKKFAMQME 211
+ K ++E
Sbjct: 180 QLLGLWADKVMAKLE 194
>gi|88857887|ref|ZP_01132529.1| MotA/TolQ/ExbB proton channel family protein [Pseudoalteromonas
tunicata D2]
gi|88819504|gb|EAR29317.1| MotA/TolQ/ExbB proton channel family protein [Pseudoalteromonas
tunicata D2]
Length = 454
Score = 74.8 bits (183), Expect = 8e-12, Method: Composition-based stats.
Identities = 38/204 (18%), Positives = 79/204 (38%), Gaps = 28/204 (13%)
Query: 17 FMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSL 76
F Q G I LL ++ + + + + ++ + + + + +
Sbjct: 270 FHQGGEVGYIIAVLL----VIGFIIALVRLIDLSLVSSKMK------------SQLKNAG 313
Query: 77 KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLG 136
+ N L I K D + + ++ +D AI RE I ++ +
Sbjct: 314 TPNTNNPLGRIL-------KVYHDNKNQD----VENLELKLDEAILRETPRIEAGINIIK 362
Query: 137 SMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIPSSIA 195
++ L+G+LG V+GM+ FQ I + + + + G I +L++ LGL ++P +
Sbjct: 363 IFAAIAPLLGLLGTVVGMIDTFQQITLFGTGDPKIMAGSISMALVTTALGLIAALPLILL 422
Query: 196 YNKFIEDSKKFAMQMEGFANEFSA 219
+ SK +E + A
Sbjct: 423 HAVVHGRSKSIVHVLEEQSAGIIA 446
>gi|256823158|ref|YP_003147121.1| MotA/TolQ/ExbB proton channel [Kangiella koreensis DSM 16069]
gi|256796697|gb|ACV27353.1| MotA/TolQ/ExbB proton channel [Kangiella koreensis DSM 16069]
Length = 447
Score = 74.8 bits (183), Expect = 8e-12, Method: Composition-based stats.
Identities = 41/205 (20%), Positives = 89/205 (43%), Gaps = 29/205 (14%)
Query: 16 LFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKS 75
L+ G A K ++ LL ++ + +++ F +G +++ K
Sbjct: 264 LWEFSGFAGKTVMVLL----VIGLLIALERIFTLY------------FVTGPKVQS-QKK 306
Query: 76 LKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFL 135
N L I M ++ + ++ + ++ +D A+ +E I ++ +
Sbjct: 307 SSTPGNNPLGRI----MKVYQANRNEDV-------ENLELKLDEAVLKETPRIERGVNLI 355
Query: 136 GSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISILLGLCVSIPSSI 194
+++ G L+G+LG V+GM+ FQSI Y + + ++ GI ++L++ + GL +IP +
Sbjct: 356 KVIAALGPLLGLLGTVVGMIEVFQSITLYGTGDPKTMADGISQALVTTVWGLLAAIPLTF 415
Query: 195 AYNKFIEDSKKFAMQMEGFANEFSA 219
+ SK +E + A
Sbjct: 416 LHAVVAGKSKSIIHVLEEQSTGLMA 440
>gi|238018772|ref|ZP_04599198.1| hypothetical protein VEIDISOL_00630 [Veillonella dispar ATCC 17748]
gi|237864538|gb|EEP65828.1| hypothetical protein VEIDISOL_00630 [Veillonella dispar ATCC 17748]
Length = 179
Score = 74.8 bits (183), Expect = 8e-12, Method: Composition-based stats.
Identities = 31/131 (23%), Positives = 57/131 (43%), Gaps = 5/131 (3%)
Query: 97 KSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMG 156
+ + G + ++ + + + + + +L + + L+G+LG V GM+G
Sbjct: 52 RIAEAGLHNASS-EEAMKTAFADQMGVDAVGFRKYMDYLSATVTISPLLGLLGTVTGMIG 110
Query: 157 FFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANE 216
F SI + G+ E+LI+ GLCV+I + I Y F Q+E
Sbjct: 111 SF-SILDSGAGASAITGGVGEALIATASGLCVAIMAFIVYTVFSHRLDAIINQIENMCV- 168
Query: 217 FSAILSRQTEG 227
+I+S + EG
Sbjct: 169 --SIVSAKREG 177
>gi|78776826|ref|YP_393141.1| MotA/TolQ/ExbB proton channel [Sulfurimonas denitrificans DSM 1251]
gi|78497366|gb|ABB43906.1| MotA/TolQ/ExbB proton channel [Sulfurimonas denitrificans DSM 1251]
Length = 149
Score = 74.8 bits (183), Expect = 8e-12, Method: Composition-based stats.
Identities = 20/82 (24%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
+T+ LS + + S VG+LG V+G+M F ++ + + + G+ +L + +GL
Sbjct: 57 LTDNLSIISVIGSNAPYVGLLGTVIGIMLTFYTMGEVGTIDAKKIMVGLALALKATAMGL 116
Query: 187 CVSIPSSIAYNKFIEDSKKFAM 208
V++P+ + Y + +K
Sbjct: 117 IVAMPAIVFYTLLLRKVEKILT 138
>gi|205355642|ref|ZP_03222412.1| putative exbB/tolQ family transport protein [Campylobacter jejuni
subsp. jejuni CG8421]
gi|205346419|gb|EDZ33052.1| putative exbB/tolQ family transport protein [Campylobacter jejuni
subsp. jejuni CG8421]
Length = 141
Score = 74.8 bits (183), Expect = 8e-12, Method: Composition-based stats.
Identities = 24/88 (27%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVS-IPGIIESLISILL 184
+ I+E L+ + + S +G+LG V+G+M F + + +V S + G+ +L + L
Sbjct: 50 DAISENLTTIYIIYSNAPYIGLLGTVIGIMVTFYEMGLAGNIDVKSIVVGLSLALKATAL 109
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEG 212
GL V+IP+ +AYN + + + +
Sbjct: 110 GLLVAIPALMAYNALLRRASLLSNAYKA 137
>gi|148925772|ref|ZP_01809460.1| putative exbB/tolQ family transport protein [Campylobacter jejuni
subsp. jejuni CG8486]
gi|145845782|gb|EDK22873.1| putative exbB/tolQ family transport protein [Campylobacter jejuni
subsp. jejuni CG8486]
Length = 166
Score = 74.8 bits (183), Expect = 8e-12, Method: Composition-based stats.
Identities = 25/88 (28%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILL 184
+ I+E L+ + + S +G+LG V+G+M F + + +V SI G+ +L + L
Sbjct: 75 DAISENLTTIYIIYSNAPYIGLLGTVIGIMVTFYEMGLAGNIDVKSIIVGLSLALKATAL 134
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEG 212
GL V+IP+ +AYN + + +
Sbjct: 135 GLLVAIPALMAYNALLRKVSLLSNAYKA 162
>gi|210135495|ref|YP_002301934.1| biopolymer transport protein ExbB [Helicobacter pylori P12]
gi|210133463|gb|ACJ08454.1| biopolymer transport protein ExbB [Helicobacter pylori P12]
Length = 145
Score = 74.8 bits (183), Expect = 9e-12, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVS-IPGIIESLISILLGL 186
+T+ L+ L + S VG+LG VLG+M F + + + + G+ +L + LGL
Sbjct: 57 LTKNLTILYVIYSNAPYVGLLGTVLGIMVVFYDMGVSGGMDAKTIMVGLSLALKATALGL 116
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQ 209
V+IP+ IAYN + S + +
Sbjct: 117 AVAIPTLIAYNSLLRKSDVLSEK 139
>gi|217032093|ref|ZP_03437593.1| hypothetical protein HPB128_16g53 [Helicobacter pylori B128]
gi|298735636|ref|YP_003728161.1| biopolymer transport exbB protein [Helicobacter pylori B8]
gi|216946241|gb|EEC24849.1| hypothetical protein HPB128_16g53 [Helicobacter pylori B128]
gi|298354825|emb|CBI65697.1| Biopolymer transport exbB protein [Helicobacter pylori B8]
Length = 145
Score = 74.8 bits (183), Expect = 9e-12, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVS-IPGIIESLISILLGL 186
+T+ L+ L + S VG+LG VLG+M F + + + + G+ +L + LGL
Sbjct: 57 LTKNLTILYVIYSNAPYVGLLGTVLGIMVIFYDMGVSGGMDAKTIMVGLSLALKATALGL 116
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQ 209
V+IP+ IAYN + S + +
Sbjct: 117 AVAIPTLIAYNSLLRKSDVLSEK 139
>gi|108563711|ref|YP_628027.1| biopolymer transport protein [Helicobacter pylori HPAG1]
gi|107837484|gb|ABF85353.1| biopolymer transport protein [Helicobacter pylori HPAG1]
Length = 166
Score = 74.8 bits (183), Expect = 9e-12, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVS-IPGIIESLISILLGL 186
+T+ L+ L + S VG+LG VLG+M F + + + + G+ +L + LGL
Sbjct: 78 LTKNLTILYVIFSNAPYVGLLGTVLGIMVIFYDMGVSGGMDAKTIMVGLSLALKATALGL 137
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQ 209
V+IP+ IAYN + S + +
Sbjct: 138 AVAIPTLIAYNSLLRKSDVLSEK 160
>gi|208435235|ref|YP_002266901.1| biopolymer transport protein [Helicobacter pylori G27]
gi|208433164|gb|ACI28035.1| biopolymer transport protein [Helicobacter pylori G27]
gi|317014729|gb|ADU82165.1| biopolymer transport protein [Helicobacter pylori Gambia94/24]
Length = 145
Score = 74.8 bits (183), Expect = 9e-12, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVS-IPGIIESLISILLGL 186
+T+ L+ L + S VG+LG VLG+M F + + + + G+ +L + LGL
Sbjct: 57 LTKNLTILYVIYSNAPYVGLLGTVLGIMVIFYDMGVSGGMDAKTIMVGLSLALKATALGL 116
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQ 209
V+IP+ IAYN + S + +
Sbjct: 117 AVAIPTLIAYNSLLRKSDVLSEK 139
>gi|262198295|ref|YP_003269504.1| MotA/TolQ/ExbB proton channel [Haliangium ochraceum DSM 14365]
gi|262081642|gb|ACY17611.1| MotA/TolQ/ExbB proton channel [Haliangium ochraceum DSM 14365]
Length = 234
Score = 74.8 bits (183), Expect = 9e-12, Method: Composition-based stats.
Identities = 39/208 (18%), Positives = 76/208 (36%), Gaps = 19/208 (9%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+ + L G + ++ S+L+ + +K + L E++ W LE
Sbjct: 1 MRLGHLLAAAGWP----MLPIYACSVLAVAAFARKLWTWRRL-----GLERMGW----LE 47
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
V SL A+ ++ DR + EL+
Sbjct: 48 PVLASLSAGALERAASEARGVAHPAARAAAAAIAVLPRRPDRARAEGARVASEELQRFES 107
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI------PGIIESLISILL 184
L L + A L+G+LG V+GM+G F + S+ GI +L++
Sbjct: 108 SLGLLSFTAQAAPLLGLLGTVIGMVGVFIDMGQGADAAARSVDVGHLSSGIWTALLTTAA 167
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEG 212
GL V++P+ A+ +++ +++
Sbjct: 168 GLIVAVPTLAAHGYLSACAERLRLRLHD 195
>gi|115379514|ref|ZP_01466608.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Stigmatella aurantiaca DW4/3-1]
gi|115363492|gb|EAU62633.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Stigmatella aurantiaca DW4/3-1]
Length = 240
Score = 74.8 bits (183), Expect = 9e-12, Method: Composition-based stats.
Identities = 30/197 (15%), Positives = 75/197 (38%), Gaps = 17/197 (8%)
Query: 38 SWSVIIQKSVNFI-TLRRQFREFEQLFWS---GQSLETVCKSLKNHHNIGLAAIFMSAMS 93
S +V ++ + F + +++ K N LA + + ++
Sbjct: 46 SLAVAAERFFTLMFRYNLHAPPFMEQISKLVMTGNVDRAVKLCSAAPNAPLAKVIRAGLT 105
Query: 94 EWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLG 153
+ + + + ++ A+ + ++ +L S+++ LVG++G + G
Sbjct: 106 RANRGEIE-----------VAKAVEEALVEHTPHVGARIPWLWSLANIATLVGLVGTIFG 154
Query: 154 MMGFFQSIAG--YYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
++G FQ++ + GI +++ + L +++ I + SK +E
Sbjct: 155 LIGTFQALGNVPAEQKQQLLSDGISKAMNNTAFALSIAVLCIIFHLILTSYSKGMVESVE 214
Query: 212 GFANEFSAILSRQTEGN 228
A +LSR+ G
Sbjct: 215 LNALRLENLLSRRNAGE 231
>gi|78777598|ref|YP_393913.1| MotA/TolQ/ExbB proton channel [Sulfurimonas denitrificans DSM 1251]
gi|78498138|gb|ABB44678.1| MotA/TolQ/ExbB proton channel [Sulfurimonas denitrificans DSM 1251]
Length = 188
Score = 74.8 bits (183), Expect = 9e-12, Method: Composition-based stats.
Identities = 24/110 (21%), Positives = 50/110 (45%), Gaps = 3/110 (2%)
Query: 116 MMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGI 175
++ + + +E T+ LS L +S +G+ G V+ ++ F I V G+
Sbjct: 82 ILSLGLQAATKEATKGLSVLSVFASTTPFIGLFGTVVSILDTFTHIGQSSGGMSVIAAGV 141
Query: 176 IESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
++L++ G+ V+I S + S + +E ++ AIL+R+
Sbjct: 142 SDALVATAAGIFVAIFSYTYHQILKRKSFELISFLEMQSD---AILARKV 188
>gi|15645952|ref|NP_208131.1| biopolymer transport protein (exbB) [Helicobacter pylori 26695]
gi|2314506|gb|AAD08381.1| biopolymer transport protein (exbB) [Helicobacter pylori 26695]
Length = 166
Score = 74.8 bits (183), Expect = 9e-12, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVS-IPGIIESLISILLGL 186
+T+ L+ L + S VG+LG VLG+M F + + + + G+ +L + LGL
Sbjct: 78 LTKNLTILYVIFSNAPYVGLLGTVLGIMVIFYDMGVSGGMDAKTIMVGLSLALKATALGL 137
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQ 209
V+IP+ IAYN + S + +
Sbjct: 138 AVAIPTLIAYNSLLRKSDVLSEK 160
>gi|168701026|ref|ZP_02733303.1| probable tolQ protein [Gemmata obscuriglobus UQM 2246]
Length = 276
Score = 74.8 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 28/164 (17%), Positives = 66/164 (40%), Gaps = 23/164 (14%)
Query: 57 REFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRM 116
R+F++ F + + L + + M +R G++D +
Sbjct: 107 RKFKEAF-----------EMARNDPSFLGQVLTAGM----------SRLQYGLEDAREAA 145
Query: 117 MDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYS-NNVVSIPGI 175
M+ + + ++ K ++ +++ G ++G++G V GM+ F +A N GI
Sbjct: 146 MNTLESIKSDK-EMKNNYNSVIATVGPMLGLVGTVWGMIRSFSVLATATQVNPSELAKGI 204
Query: 176 IESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
+L+ L G+ +S+P+ + + M + A++
Sbjct: 205 SHALVVTLFGVAISVPAIFFNAFYRNRITRVTMDVGHIADDLLT 248
>gi|9911067|sp|O25897|EXBB_HELPY RecName: Full=Biopolymer transport protein exbB
Length = 145
Score = 74.8 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVS-IPGIIESLISILLGL 186
+T+ L+ L + S VG+LG VLG+M F + + + + G+ +L + LGL
Sbjct: 57 LTKNLTILYVIFSNAPYVGLLGTVLGIMVIFYDMGVSGGMDAKTIMVGLSLALKATALGL 116
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQ 209
V+IP+ IAYN + S + +
Sbjct: 117 AVAIPTLIAYNSLLRKSDVLSEK 139
>gi|322379703|ref|ZP_08054016.1| biopolymer transport protein ExbB [Helicobacter suis HS5]
gi|321147852|gb|EFX42439.1| biopolymer transport protein ExbB [Helicobacter suis HS5]
Length = 153
Score = 74.5 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 21/105 (20%), Positives = 46/105 (43%), Gaps = 1/105 (0%)
Query: 115 RMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG 174
+ V ++ L + T L L ++S VG+ G V+ ++ F + G S + V P
Sbjct: 45 EWLAVWKSQLLRQNTTGLVVLSIIASTAPFVGLFGTVVEILETFGHLGGQVSFD-VIAPT 103
Query: 175 IIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
I ++L++ G+ +IP+ + ++ ++ + A
Sbjct: 104 ISKALVATAAGILTAIPAYSFFLILKRKVYDLSVYVQMQIDMLIA 148
>gi|307638012|gb|ADN80462.1| Biopolymer transport protein [Helicobacter pylori 908]
gi|325996615|gb|ADZ52020.1| Ferric siderophore transport system/ biopolymer transport protein
[Helicobacter pylori 2018]
gi|325998205|gb|ADZ50413.1| Biopolymer transport protein [Helicobacter pylori 2017]
Length = 145
Score = 74.5 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVS-IPGIIESLISILLGL 186
+T+ L+ L + S VG+LG VLG+M F + + + + G+ +L + LGL
Sbjct: 57 LTKNLTILYVIYSNAPYVGLLGTVLGIMVIFYDMGMSGGMDAKTIMVGLSLALKATALGL 116
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQ 209
V+IP+ IAYN + S + +
Sbjct: 117 AVAIPTLIAYNSLLRKSDVLSEK 139
>gi|297380520|gb|ADI35407.1| tonB-system energizer ExbB [Helicobacter pylori v225d]
Length = 145
Score = 74.5 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVS-IPGIIESLISILLGL 186
+T+ L+ L + S VG+LG VLG+M F + + + + G+ +L + LGL
Sbjct: 57 LTKNLTILYVIYSNAPYVGLLGTVLGIMVIFYDMGVSGGMDAKTIMVGLSLALKATALGL 116
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQ 209
V+IP+ IAYN + S + +
Sbjct: 117 AVAIPTLIAYNSLLRKSDVLSEK 139
>gi|254779880|ref|YP_003057986.1| Biopolymer transport accessory protein; putative membrane protein
[Helicobacter pylori B38]
gi|254001792|emb|CAX30023.1| Biopolymer transport accessory protein; putative membrane protein
[Helicobacter pylori B38]
Length = 145
Score = 74.5 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVS-IPGIIESLISILLGL 186
+T+ L+ L + S VG+LG VLG+M F + + + + G+ +L + LGL
Sbjct: 57 LTKNLTILYVIYSNAPYVGLLGTVLGIMVIFYDMGVSGGMDAKTIMVGLSLALKATALGL 116
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQ 209
V+IP+ IAYN + S + +
Sbjct: 117 AVAIPTLIAYNSLLRKSDVLSEK 139
>gi|171914073|ref|ZP_02929543.1| MotA/TolQ/ExbB proton channel [Verrucomicrobium spinosum DSM 4136]
Length = 297
Score = 74.5 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 32/200 (16%), Positives = 72/200 (36%), Gaps = 26/200 (13%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFR------EFEQLFWS 65
S+ F + G ++ + FS+L+ + + + T +++ + LF
Sbjct: 65 SMLDKFKEGGW----VMYPILGFSVLT--IWLSTDLWIRTGKKKLAPDAHVNGAKDLFRM 118
Query: 66 GQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
G + KN+ + + + Q + M + +
Sbjct: 119 G-DYVGAYQHCKNNPSA------------FSDTVRVSLSFIGDGQHATEDAMMGELNKFN 165
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV-SIPGIIESLISILL 184
T ++++L + +VG+LG V GM+ F+ + + I E LI+
Sbjct: 166 AATTTRINYLSVIGVCTPMVGLLGTVTGMVTAFEHLGASGVGDPSGLSAAIGEVLIATAS 225
Query: 185 GLCVSIPSSIAYNKFIEDSK 204
GL ++IP+ + + +
Sbjct: 226 GLAIAIPAFMMFYVLRNRLQ 245
>gi|323496779|ref|ZP_08101824.1| ExbB-like protein [Vibrio sinaloensis DSM 21326]
gi|323318204|gb|EGA71170.1| ExbB-like protein [Vibrio sinaloensis DSM 21326]
Length = 235
Score = 74.5 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 32/195 (16%), Positives = 71/195 (36%), Gaps = 26/195 (13%)
Query: 28 ITLLFIFSILSWSVIIQKSVN----FITLRRQFREFEQLFW--SGQSLETVCKSLKNHHN 81
L I S L+ +I ++ +R R + + + +E + + L
Sbjct: 15 AWPLIICSALTVMIIAERLFQVLISIGVGKRVIRTELKNVSPTNSKDIEQLAEKLSPKRP 74
Query: 82 I---GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSM 138
+ G+A + A + K+ + A + + ++ L L +
Sbjct: 75 LLYKGVAMLL--AHHSFPKTLREDAAGMW-------------LQEKRHQLNSGLRLLTLI 119
Query: 139 SSAGLLVGILGAVLGMMGFFQSIAGYYSNNV--VSIPGIIESLISILLGLCVSIPSSIAY 196
L+G+LG VLG++ F+ +A N G+ ++ + GL +++P+
Sbjct: 120 GVISPLIGLLGTVLGLIEMFKGVAASTGNITPNDLADGLGLAMRTTAAGLLIALPAIAGA 179
Query: 197 NKFIEDSKKFAMQME 211
+ K ++E
Sbjct: 180 QLLGLWADKVMAKLE 194
>gi|261838657|gb|ACX98423.1| biopolymer transport accessory protein [Helicobacter pylori 51]
Length = 161
Score = 74.5 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVS-IPGIIESLISILLGL 186
+T+ L+ L + S VG+LG VLG+M F + + + + G+ +L + LGL
Sbjct: 73 LTKNLTILYVIYSNAPYVGLLGTVLGIMVIFYDMGVSGGMDAKTIMVGLSLALKATALGL 132
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQ 209
V+IP+ IAYN + S + +
Sbjct: 133 AVAIPTLIAYNSLLRKSDVLSEK 155
>gi|315587228|gb|ADU41609.1| TonB-system energizer ExbB [Helicobacter pylori 35A]
Length = 145
Score = 74.5 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVS-IPGIIESLISILLGL 186
+T+ L+ L + S VG+LG VLG+M F + + + + G+ +L + LGL
Sbjct: 57 LTKNLTILYVIYSNAPYVGLLGTVLGIMVIFYDMGVSGGMDAKTIMVGLSLALKATALGL 116
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQ 209
V+IP+ IAYN + S + +
Sbjct: 117 AVAIPTLIAYNSLLRKSDVLSEK 139
>gi|77360131|ref|YP_339706.1| MotA/TolQ/ExbB proton channel protein [Pseudoalteromonas
haloplanktis TAC125]
gi|76875042|emb|CAI86263.1| MotA/TolQ/ExbB proton channel family protein [Pseudoalteromonas
haloplanktis TAC125]
Length = 454
Score = 74.5 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 38/209 (18%), Positives = 82/209 (39%), Gaps = 28/209 (13%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLET 71
++ F Q G+ I LL + +++ + ++ ++ Q +
Sbjct: 265 TLMEYFHQGGVVGYIITALLALGMLITLIRFVDLTLTTSKIKSQLKNV------------ 312
Query: 72 VCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEK 131
+ N L I K D + + ++ +D AI RE I
Sbjct: 313 ----ATPNTNNPLGRIL-------KVYHDNKNQD----VENLELKLDEAILRETPRIEAG 357
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSI 190
++ + +++ L+G+LG V+GM+ FQ+I + + + + G I +L++ LGL ++
Sbjct: 358 INIIKILAAIAPLLGLLGTVIGMILTFQTITLFGTGDPKIMAGNISLALVTTALGLIAAL 417
Query: 191 PSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
P + + SK ++ + A
Sbjct: 418 PLILLHALVAGRSKSVLHILDEQSAGIVA 446
>gi|225593168|gb|ACN96085.1| putative biopolymer transport protein [Fischerella sp. MV11]
Length = 217
Score = 74.5 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 39/220 (17%), Positives = 90/220 (40%), Gaps = 28/220 (12%)
Query: 17 FMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQL---FWSGQSLETVC 73
F Q G ++ L FS+++ ++II++ + + + + + + ++
Sbjct: 6 FFQAGGV---VMWPLLAFSVVAIALIIERVRFWYRINTRQHKVVREVLNLYRVDNVVGAM 62
Query: 74 KSLKNHHNIGLAAIFMSAM-------SEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
+ LK + ++ ++ IF+SA+ E++ + + A++ I + R + + I
Sbjct: 63 EKLKKNADLPISRIFLSALQLEEPTPEEFRLALESEAQAEIPVLKRFQNIFETIIGLAPL 122
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGL 186
+S A L +G +AG + GI E+L+S GL
Sbjct: 123 LGLLGTVLGLIVSFASLDLG-------------DVAGEKTAG--VTAGISEALVSTASGL 167
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
V+I + + N F ++ ++ +A + + R+ E
Sbjct: 168 VVAIFTLLFANTFRGLYQRQIAGIQEYAGQLELLYRRRYE 207
>gi|281423645|ref|ZP_06254558.1| MotA/TolQ/ExbB proton channel family protein [Prevotella oris
F0302]
gi|299141280|ref|ZP_07034417.1| MotA/TolQ/ExbB proton channel family protein [Prevotella oris C735]
gi|281402197|gb|EFB33028.1| MotA/TolQ/ExbB proton channel family protein [Prevotella oris
F0302]
gi|298577240|gb|EFI49109.1| MotA/TolQ/ExbB proton channel family protein [Prevotella oris C735]
Length = 278
Score = 74.5 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 40/210 (19%), Positives = 87/210 (41%), Gaps = 19/210 (9%)
Query: 13 IFALFMQMGLAVKCIITLLF---IFSILSWSVIIQKSVNFITL--RRQFREFE---QLFW 64
++ + G+ V I TLL SI ++ + T + +F +
Sbjct: 59 VWGTIFKGGMIVPVIHTLLLTVLAMSI-------ERVLAMKTAFGKGSLPKFVVNIKAAL 111
Query: 65 SGQSLETVCKSLKNHHNIGLAAIFMSAMSEWK--KSCDKGARSPIGIQDRIDRMMDVAIA 122
+ + L + +A + ++++ +K ++ + +I + + A
Sbjct: 112 NANDFAQA-QQLCDKQRGSVANVVYASLNAYKDMETGANASLKKAQKIAKIQQAHEEATQ 170
Query: 123 RELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI-AGYYSNNVVSIPGIIESLIS 181
E+ +T L + ++ + G L G+LG V GM+ F ++ AG +++ GI E+LI+
Sbjct: 171 LEMPTLTMNLPIIATIVTLGTLTGLLGTVTGMIKSFSALSAGGGADSAALSAGISEALIN 230
Query: 182 ILLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
G+ S + ++YN F K ++
Sbjct: 231 TAFGILTSWCAVVSYNYFTNKVDKLTYALD 260
>gi|162451266|ref|YP_001613633.1| adventurous gliding motility protein R [Sorangium cellulosum 'So ce
56']
gi|161161848|emb|CAN93153.1| adventurous gliding motility protein R [Sorangium cellulosum 'So ce
56']
Length = 220
Score = 74.5 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 40/200 (20%), Positives = 82/200 (41%), Gaps = 17/200 (8%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLK--NHHNIGLA 85
+ + +SIL+ +I+++++ F V K++K + N LA
Sbjct: 15 MWPILFWSILTIGIIVERALYLFGSSINKDVFLATMQKCILAGDVAKAVKMCSAANAPLA 74
Query: 86 AIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLV 145
I + + + + + + MD A REL +I+ + S+L +++ +L
Sbjct: 75 RIVQAGLVKVNR-----------PDEEVQAAMDEAALRELPKISARTSYLALLANLAMLS 123
Query: 146 GILGAVLGMMGFFQSIAGY----YSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIE 201
G+LG V G++ F S+AG V GI E++ GL V+I I +
Sbjct: 124 GLLGTVTGLIKSFGSVAGESVDPSQKARVLALGISEAMNCTAFGLGVAIIGLIGFAVLNG 183
Query: 202 DSKKFAMQMEGFANEFSAIL 221
++ + + + ++
Sbjct: 184 KTQHIEDDINEASVQILNLV 203
>gi|296123367|ref|YP_003631145.1| MotA/TolQ/ExbB proton channel [Planctomyces limnophilus DSM 3776]
gi|296015707|gb|ADG68946.1| MotA/TolQ/ExbB proton channel [Planctomyces limnophilus DSM 3776]
Length = 274
Score = 74.5 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 29/146 (19%), Positives = 52/146 (35%), Gaps = 2/146 (1%)
Query: 74 KSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLS 133
+ + L A + SE + +D + K+S
Sbjct: 118 QLIAEREFTTLLATAKAENSEIGRVLTTAFSGLSIGIAEAREAVDRGADTLAVNLETKIS 177
Query: 134 FLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV--VSIPGIIESLISILLGLCVSIP 191
L + S G ++G+LG + GM+ F IA GI E+LI G+ +S+P
Sbjct: 178 MLAVIGSLGPMIGLLGTLKGMISSFSVIALSDQQMKASAVAGGISEALILTFEGVALSVP 237
Query: 192 SSIAYNKFIEDSKKFAMQMEGFANEF 217
+ + F + ++ A+E
Sbjct: 238 AIYFFAFFRNRVANLTVAVQNTADEI 263
>gi|120554518|ref|YP_958869.1| MotA/TolQ/ExbB proton channel [Marinobacter aquaeolei VT8]
gi|120324367|gb|ABM18682.1| outer membrane transport energization protein ExbB [Marinobacter
aquaeolei VT8]
Length = 221
Score = 74.5 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 34/227 (14%), Positives = 86/227 (37%), Gaps = 19/227 (8%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
M NY M ++ F + G + I +L + ++ +++ + +RR+ R
Sbjct: 1 MENY---TMLDTVIRFFQEGGPFMYPIAIVLAL----GLAITLERFLYLGAVRRRNRVAF 53
Query: 61 QLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIG--IQDRIDRMMD 118
+ + +L+ S+ S G I ++ I+ M+
Sbjct: 54 ER--------GILPALQKRDYQRAMKAASSSDSAIASVLGAGIARLINNCRREDIEYAME 105
Query: 119 VAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGY--YSNNVVSIPGII 176
+ L + ++ +L ++++ L+G+LG ++G++ F ++A + I
Sbjct: 106 EGLMEVLPRLEKRTQYLATLANIATLLGLLGTIIGLIAAFTAVAAADPAQKASLLSESIS 165
Query: 177 ESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
++ + GL +IP + + + + E + ++S
Sbjct: 166 VAMNTTAFGLMSAIPLLLFHAVLQTRTNEIVDSFEMAGVKLLNMVSE 212
>gi|315633593|ref|ZP_07888883.1| TonB family auxiliary protein ExbB [Aggregatibacter segnis ATCC
33393]
gi|315477635|gb|EFU68377.1| TonB family auxiliary protein ExbB [Aggregatibacter segnis ATCC
33393]
Length = 154
Score = 74.1 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 20/79 (25%), Positives = 37/79 (46%), Gaps = 2/79 (2%)
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYS--NNVVSIPGIIESLISILLG 185
+ L+ + ++ + VG+LG V+G++ F I N + + +L + LG
Sbjct: 56 LNRNLTVISTVGANAPYVGLLGTVIGILLTFYQIGQSGGDVNAGEIMMHLSLALKATALG 115
Query: 186 LCVSIPSSIAYNKFIEDSK 204
+ V+IPS I YN +
Sbjct: 116 ILVAIPSMIFYNALGRKVE 134
>gi|149918348|ref|ZP_01906839.1| MotA/TolQ/ExbB proton channel family protein [Plesiocystis pacifica
SIR-1]
gi|149820874|gb|EDM80283.1| MotA/TolQ/ExbB proton channel family protein [Plesiocystis pacifica
SIR-1]
Length = 198
Score = 74.1 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 31/197 (15%), Positives = 83/197 (42%), Gaps = 17/197 (8%)
Query: 36 ILSWSVIIQKS-VNFITLRRQFREFEQLFWS---GQSLETVCKSLKNHHNIGLAAIFMSA 91
IL +V++++ F ++F +++ K LA + +
Sbjct: 11 ILGLAVMVERFIFLFFRFNINGQQFFNQIQKLVMANNIDRAIKLCNAADKAALARVVKAG 70
Query: 92 MSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAV 151
++ KS I ++ ++ I +++ + ++++ L+G+LG +
Sbjct: 71 LTRANKSEAD-----------ISAAIEESMLEVGPAINKRVPMIAAIANIATLLGLLGTI 119
Query: 152 LGMMGFFQSIAGYYSN--NVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQ 209
GM+ F+++A ++ + GI ++ + GL V+IP ++ +KK + +
Sbjct: 120 FGMLDAFRAVADAPADQRSTALARGIGIAMNTTGFGLMVAIPLLASHIFISNLAKKISDE 179
Query: 210 MEGFANEFSAILSRQTE 226
+E ++ + +L+ +
Sbjct: 180 VELYSVKLENLLAARVR 196
>gi|15612323|ref|NP_223976.1| biopolymer transport protein [Helicobacter pylori J99]
gi|9910670|sp|Q9ZJP6|EXBB_HELPJ RecName: Full=Biopolymer transport protein exbB
gi|4155859|gb|AAD06831.1| BIOPOLYMER TRANSPORT PROTEIN [Helicobacter pylori J99]
Length = 145
Score = 74.1 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVS-IPGIIESLISILLGL 186
+T+ L+ L + S VG+LG VLG+M F + + + + G+ +L + LGL
Sbjct: 57 LTKNLTILYVIFSNAPYVGLLGTVLGIMVIFYDMGVSGGMDAKTIMVGLSLALKATALGL 116
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQ 209
V+IP+ IAYN + S + +
Sbjct: 117 AVAIPTLIAYNSLLRKSDVLSEK 139
>gi|67920606|ref|ZP_00514126.1| MotA/TolQ/ExbB proton channel [Crocosphaera watsonii WH 8501]
gi|67858090|gb|EAM53329.1| MotA/TolQ/ExbB proton channel [Crocosphaera watsonii WH 8501]
Length = 215
Score = 74.1 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 40/207 (19%), Positives = 83/207 (40%), Gaps = 17/207 (8%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ---LFWSGQSLETVCKSLKNHHNI 82
+ L FS+L ++II++ + + ++ + + + G LK + ++
Sbjct: 10 IVAWPLLAFSLLGVALIIERFLFWFQIKAREKRVVNTVLKLYQGNEPMAAIAKLKKNADL 69
Query: 83 GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAG 142
L IF+ A+ + ++ A EL + + ++ +
Sbjct: 70 PLCRIFLEALILY-----------DATPTEFRLALETATQGELPLLKRFNTVFQTIIAVS 118
Query: 143 LLVGILGAVLGMMGFFQSI---AGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKF 199
L+G+LG +LG+M F ++ +N GI E+L S ++GL V+I + N F
Sbjct: 119 PLLGLLGTILGLMRSFAALDIGNTGGTNTGAVTGGISEALTSTVMGLVVAIAILLFSNSF 178
Query: 200 IEDSKKFAMQMEGFANEFSAILSRQTE 226
K ++ +A + + R E
Sbjct: 179 RSLYLKEFALIQEYAGQLELLYRRHYE 205
>gi|315638833|ref|ZP_07894005.1| TonB family auxiliary protein ExbB [Campylobacter upsaliensis JV21]
gi|315481051|gb|EFU71683.1| TonB family auxiliary protein ExbB [Campylobacter upsaliensis JV21]
Length = 141
Score = 74.1 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVS-IPGIIESLISILLGL 186
I+E L+ L + S +G+LG V+G+M F + +V S + G+ +L + LGL
Sbjct: 52 ISENLTTLYIIYSNAPYIGLLGTVIGIMMTFYEMGVVGDIDVKSIVIGLSLALKATALGL 111
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEG 212
V+IPS +AYN + + +G
Sbjct: 112 LVAIPSLMAYNALLRKITLLSSAYKG 137
>gi|120554728|ref|YP_959079.1| MotA/TolQ/ExbB proton channel [Marinobacter aquaeolei VT8]
gi|120324577|gb|ABM18892.1| outer membrane transport energization protein ExbB [Marinobacter
aquaeolei VT8]
Length = 235
Score = 74.1 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 32/208 (15%), Positives = 79/208 (37%), Gaps = 13/208 (6%)
Query: 17 FMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSL 76
F + G + I +L I+ V I++ V + R + + +L
Sbjct: 9 FQEGGFFMFPIAVVL----IIGLIVAIERYVYLSAQKLTNRRDFNRLHQMIAKRDLRGAL 64
Query: 77 KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLG 136
G A M + + +G ++ I+ M+ + + + ++ +L
Sbjct: 65 NYTQESGSAMSTMIGFGLQRLARRQG-------REEIEYAMEEGLLDVMPRLEKRTQYLA 117
Query: 137 SMSSAGLLVGILGAVLGMMGFFQSIAGY--YSNNVVSIPGIIESLISILLGLCVSIPSSI 194
++++ L+G+LG ++G++ F ++A + I ++ + GL +IP +
Sbjct: 118 TLANIATLLGLLGTIIGLIAAFTAVAAADPAQKASLLSQSISVAMNTTAFGLMSAIPMLL 177
Query: 195 AYNKFIEDSKKFAMQMEGFANEFSAILS 222
++ + + E + +LS
Sbjct: 178 IHSLLQTKTNEIVDSFEMAGIKVLNLLS 205
>gi|148643038|ref|YP_001273551.1| biopolymer MotA/TolQ/ExbB proton channel family transporter
[Methanobrevibacter smithii ATCC 35061]
gi|222445275|ref|ZP_03607790.1| hypothetical protein METSMIALI_00903 [Methanobrevibacter smithii
DSM 2375]
gi|261350166|ref|ZP_05975583.1| biopolymer transport protein [Methanobrevibacter smithii DSM 2374]
gi|148552055|gb|ABQ87183.1| biopolymer transport protein, MotA/TolQ/ExbB proton channel family
[Methanobrevibacter smithii ATCC 35061]
gi|222434840|gb|EEE42005.1| hypothetical protein METSMIALI_00903 [Methanobrevibacter smithii
DSM 2375]
gi|288860952|gb|EFC93250.1| biopolymer transport protein [Methanobrevibacter smithii DSM 2374]
Length = 279
Score = 74.1 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 37/203 (18%), Positives = 81/203 (39%), Gaps = 19/203 (9%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRR-QFREFEQLFWSGQSLE 70
++ +F Q G+ I+ + I V ++K V + + E + S
Sbjct: 12 NLMEIFTQGGIITYIILFI----GIYGLLVSLRKIVYLKKISKVDTTEILGIVSSSMERG 67
Query: 71 TVCKSLK--NHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
++LK N ++ I +SE K K + ++ M+ E+ ++
Sbjct: 68 GAVEALKQINSFKNPISKI----ISETLKIGYKN-------KTEVEESMEQIFIVEVSKM 116
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCV 188
T+ L+ + ++ +G++G V+G+ F+++ G N GI +L + + GL V
Sbjct: 117 TKGLNSIKTIIELAPFLGLIGTVIGIWMTFKAL-GVTPNPSAMAEGIYVALTTTIAGLFV 175
Query: 189 SIPSSIAYNKFIEDSKKFAMQME 211
+I + + ++E
Sbjct: 176 AIVLLPLHTYIQGLVENEMDKIE 198
>gi|218439351|ref|YP_002377680.1| MotA/TolQ/ExbB proton channel [Cyanothece sp. PCC 7424]
gi|218172079|gb|ACK70812.1| MotA/TolQ/ExbB proton channel [Cyanothece sp. PCC 7424]
Length = 216
Score = 74.1 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 46/225 (20%), Positives = 97/225 (43%), Gaps = 25/225 (11%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKS----VNFITLRRQFREFEQLFWSG 66
+ + F+ G+ + L FS+L+ ++II++S R +E +L+ S
Sbjct: 1 MVVVDFFVAGGI----VAWPLLGFSLLAITLIIERSYFWFRIQSRQSRVVKEVLKLYRS- 55
Query: 67 QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
K LK + ++ +A IF+ + +P + R+ ++ A EL
Sbjct: 56 -DPFAAIKRLKQNADLPVARIFLEPLE---------LEAPTPAEFRL--ALETATNAELP 103
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI---AGYYSNNVVSIPGIIESLISIL 183
S ++ + L+G+LG +LG+M F ++ SN GI E+L+S +
Sbjct: 104 LFKRYNSIFQTIITVSPLLGLLGTILGLMQSFSALDLGNAGGSNATGVTAGISEALVSTV 163
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
+G+ V++ + + N F ++ ++ + + +L R+
Sbjct: 164 MGIVVAVFTLLFANSFRALYQRQLALIQEYGGQL-ELLYRRLHEK 207
>gi|261493324|ref|ZP_05989850.1| Biopolymer transport protein exbB [Mannheimia haemolytica serotype
A2 str. BOVINE]
gi|261496589|ref|ZP_05992969.1| Biopolymer transport protein exbB [Mannheimia haemolytica serotype
A2 str. OVINE]
gi|261307792|gb|EEY09115.1| Biopolymer transport protein exbB [Mannheimia haemolytica serotype
A2 str. OVINE]
gi|261310968|gb|EEY12145.1| Biopolymer transport protein exbB [Mannheimia haemolytica serotype
A2 str. BOVINE]
Length = 170
Score = 74.1 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 16/80 (20%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVS--IPGIIESLISILLG 185
+T L+ + ++ S +G+LG V+G++ F + + + + + +L + +G
Sbjct: 74 LTHNLTTISTIGSNAPYIGLLGTVVGILLTFYHLGQSGGDIDAASIMVNLSLALKATAVG 133
Query: 186 LCVSIPSSIAYNKFIEDSKK 205
+ V+I + + YN F ++
Sbjct: 134 ILVAIIAMVFYNGFGRKVEE 153
>gi|260912747|ref|ZP_05919233.1| TonB-system energizer ExbB [Pasteurella dagmatis ATCC 43325]
gi|260633125|gb|EEX51290.1| TonB-system energizer ExbB [Pasteurella dagmatis ATCC 43325]
Length = 152
Score = 74.1 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 19/89 (21%), Positives = 42/89 (47%), Gaps = 4/89 (4%)
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYS--NNVVSIPGIIESLISILLG 185
+ L+ + ++ S VG+LG V+G++ F + + + + +L + +G
Sbjct: 56 LQRHLTAISTIGSNAPYVGLLGTVIGILLTFYELGHSGGEIDAAAIMVHLSLALKATAVG 115
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFA 214
+ V+IPS + YN + +++ FA
Sbjct: 116 ILVAIPSMVFYNGLGRKVE--VNRLKWFA 142
>gi|261867194|ref|YP_003255116.1| TonB-system energizer ExbB [Aggregatibacter actinomycetemcomitans
D11S-1]
gi|261412526|gb|ACX81897.1| TonB-system energizer ExbB [Aggregatibacter actinomycetemcomitans
D11S-1]
Length = 156
Score = 74.1 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 19/79 (24%), Positives = 37/79 (46%), Gaps = 2/79 (2%)
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYS--NNVVSIPGIIESLISILLG 185
+ L+ + ++ + VG+LG V+G++ F I + + + +L + LG
Sbjct: 56 LNRNLTIVSTVGANAPYVGLLGTVIGILLTFYQIGQSGGEVDAGEIMLHLSLALKATALG 115
Query: 186 LCVSIPSSIAYNKFIEDSK 204
+ V+IPS I YN +
Sbjct: 116 ILVAIPSMIFYNALGRKVE 134
>gi|254458976|ref|ZP_05072399.1| MotA/TolQ/ExbB proton channel [Campylobacterales bacterium GD 1]
gi|207084247|gb|EDZ61536.1| MotA/TolQ/ExbB proton channel [Campylobacterales bacterium GD 1]
Length = 188
Score = 74.1 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 20/105 (19%), Positives = 47/105 (44%)
Query: 115 RMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG 174
++ +A+ +E T+ LS L +S +G+ G V+ ++ F I + V G
Sbjct: 81 EILGLAMLAATKEATKGLSLLSIFASTTPFIGLFGTVVSILDTFTHIGQSTGSMSVISSG 140
Query: 175 IIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
+ ++L++ G+ V+I + + S + ++ ++ A
Sbjct: 141 VSDALVATAAGIFVAIFAYTYHQVLKRKSFELVSCLQMQSDAVLA 185
>gi|310822348|ref|YP_003954706.1| MotA/TolQ/ExbB proton channel family protein [Stigmatella
aurantiaca DW4/3-1]
gi|309395420|gb|ADO72879.1| MotA/TolQ/ExbB proton channel family protein [Stigmatella
aurantiaca DW4/3-1]
Length = 244
Score = 74.1 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 30/197 (15%), Positives = 75/197 (38%), Gaps = 17/197 (8%)
Query: 38 SWSVIIQKSVNFI-TLRRQFREFEQLFWS---GQSLETVCKSLKNHHNIGLAAIFMSAMS 93
S +V ++ + F + +++ K N LA + + ++
Sbjct: 50 SLAVAAERFFTLMFRYNLHAPPFMEQISKLVMTGNVDRAVKLCSAAPNAPLAKVIRAGLT 109
Query: 94 EWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLG 153
+ + + + ++ A+ + ++ +L S+++ LVG++G + G
Sbjct: 110 RANRGEIE-----------VAKAVEEALVEHTPHVGARIPWLWSLANIATLVGLVGTIFG 158
Query: 154 MMGFFQSIAG--YYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
++G FQ++ + GI +++ + L +++ I + SK +E
Sbjct: 159 LIGTFQALGNVPAEQKQQLLSDGISKAMNNTAFALSIAVLCIIFHLILTSYSKGMVESVE 218
Query: 212 GFANEFSAILSRQTEGN 228
A +LSR+ G
Sbjct: 219 LNALRLENLLSRRNAGE 235
>gi|34557775|ref|NP_907590.1| biopolymer transport EXBB protein [Wolinella succinogenes DSM 1740]
gi|34483492|emb|CAE10490.1| BIOPOLYMER TRANSPORT EXBB PROTEIN [Wolinella succinogenes]
Length = 142
Score = 74.1 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI-AGYYSNNVVSIPGIIESLISILLGL 186
+T+ L+ L + S +G+LG V+G+M F + +G + + G+ +L + LGL
Sbjct: 52 LTQNLTILSIIGSNAPYIGLLGTVIGIMVTFYDMGSGAGIDTNAVLIGLSLALKATALGL 111
Query: 187 CVSIPSSIAYNKFIEDSKKFAM 208
V+IP+ I Y +
Sbjct: 112 LVAIPTLIVYTACLRKVDVHIA 133
>gi|255691966|ref|ZP_05415641.1| putative TolQ-type transport protein [Bacteroides finegoldii DSM
17565]
gi|260622375|gb|EEX45246.1| putative TolQ-type transport protein [Bacteroides finegoldii DSM
17565]
Length = 462
Score = 73.7 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 22/117 (18%), Positives = 52/117 (44%), Gaps = 6/117 (5%)
Query: 108 GIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFF--QSIAGYY 165
++ + + AR++ ++ L ++S L+G+LG V+GM+ F ++ G
Sbjct: 334 AGREAVSQTAGDMAARDIRTHLARIYPLSVIASLAPLIGLLGTVVGMIEAFGLVALYGDE 393
Query: 166 SNNVVSIPGIIESLISILLGLCVSIPSSIAY----NKFIEDSKKFAMQMEGFANEFS 218
+ I ++LI+ GL ++ P+ Y N+ + + +++E +
Sbjct: 394 GGASILSDSISKALITTAAGLIIAAPAIALYFIIKNRIMRMASLVEVEVENVITKLY 450
>gi|307720573|ref|YP_003891713.1| outer membrane transport energization protein ExbB [Sulfurimonas
autotrophica DSM 16294]
gi|306978666|gb|ADN08701.1| outer membrane transport energization protein ExbB [Sulfurimonas
autotrophica DSM 16294]
Length = 149
Score = 73.7 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 20/91 (21%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV-SIPGIIESLISILLGL 186
+T+ ++ + ++ + VG+LG V+G+M F S+ + + + G+ +L + +GL
Sbjct: 59 LTDNINVISAIGANAPYVGLLGTVIGIMITFYSLGDLGAVDAKKIMVGLALALKATAMGL 118
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEF 217
V+IP+ +AY + ++ + + E
Sbjct: 119 VVAIPAIVAYTIVLRKVERILTKFDVAHEEV 149
>gi|157736956|ref|YP_001489639.1| biopolymer transport protein ExbB [Arcobacter butzleri RM4018]
gi|315636146|ref|ZP_07891400.1| TonB-system energizer ExbB [Arcobacter butzleri JV22]
gi|157698810|gb|ABV66970.1| biopolymer transport protein ExbB [Arcobacter butzleri RM4018]
gi|315479507|gb|EFU70186.1| TonB-system energizer ExbB [Arcobacter butzleri JV22]
Length = 142
Score = 73.7 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 20/85 (23%), Positives = 40/85 (47%)
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLC 187
+T+ L+ +G+++S +G+LG VL +M F ++ + + +L + +GL
Sbjct: 55 LTKHLTIIGTIASNSPYIGLLGTVLAIMLTFMNMGNGDIEAAKIMESLALALKATAVGLV 114
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEG 212
V+I S + YN + E
Sbjct: 115 VAIISMVFYNILSRYVEVTESLYEA 139
>gi|187736348|ref|YP_001878460.1| MotA/TolQ/ExbB proton channel [Akkermansia muciniphila ATCC
BAA-835]
gi|187426400|gb|ACD05679.1| MotA/TolQ/ExbB proton channel [Akkermansia muciniphila ATCC
BAA-835]
Length = 210
Score = 73.7 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 37/211 (17%), Positives = 75/211 (35%), Gaps = 26/211 (12%)
Query: 17 FMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFIT-------LRRQFREFEQLFWSGQSL 69
F Q G + L S+L + +I + N L R ++ + L
Sbjct: 12 FFQAGGVF---MYPLAACSVLLIAAVIYRMFNMKKSLICPVVLTRAVEQYTRGAVGRTEL 68
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
E + + + +P+ + + M+ V E +
Sbjct: 69 ERIAADSDSVEG---------------RLVLDALNAPLEDEASLKEMIQVKAREEFVTLQ 113
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVS 189
L L + + GILG G++ F S+ G ++ + GI ++L + + GL ++
Sbjct: 114 AGLPLLDMIVMIAPMFGILGTASGLVQIF-SVFGMDESHGMIAQGIAQALNTTIAGLAIA 172
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFANEFSAI 220
P+ IA+ + ++ + ME E +
Sbjct: 173 TPAVIAHVYYSRKLERISASMEVLLTELVSF 203
>gi|237751981|ref|ZP_04582461.1| predicted protein [Helicobacter winghamensis ATCC BAA-430]
gi|229376548|gb|EEO26639.1| predicted protein [Helicobacter winghamensis ATCC BAA-430]
Length = 190
Score = 73.7 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 34/210 (16%), Positives = 80/210 (38%), Gaps = 26/210 (12%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+S+F+L G+ ++ L ++ IL + I + + +L
Sbjct: 1 MSLFSLLDSYGITTVVVLLWLSLYFILVLWIFIYRYFSITM----------------TLS 44
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
K L+ I + + K+ G+ + + M+ A+ + +++ T
Sbjct: 45 GEKKCLE---------ILLEGRNALPKNSLLGSNLAKIDKRLTEPMLQYALDKAIKDATI 95
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVS 189
L+FL ++S +G+ G V+ ++ F + + V P I ++L++ G+ +
Sbjct: 96 GLTFLAIVASTAPFIGLFGTVVEILEAFSKLGENSKATLDVIAPIISKALVATAAGILTA 155
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
IP+ + ++ N S+
Sbjct: 156 IPAYSFNLFLKRKVFELNTYLQLQINVLSS 185
>gi|167856278|ref|ZP_02479010.1| biopolymer transport protein [Haemophilus parasuis 29755]
gi|219871519|ref|YP_002475894.1| biopolymer transport protein ExbB [Haemophilus parasuis SH0165]
gi|167852602|gb|EDS23884.1| biopolymer transport protein [Haemophilus parasuis 29755]
gi|219691723|gb|ACL32946.1| biopolymer transport protein ExbB [Haemophilus parasuis SH0165]
Length = 150
Score = 73.7 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 17/80 (21%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVS--IPGIIESLISILLG 185
+T L+ + ++ S +G+LG V+G++ F + + + + + +L + +G
Sbjct: 56 LTANLTTISTIGSNAPYIGLLGTVIGILLTFYELGHSGGDIDAASIMVHLSLALKATAVG 115
Query: 186 LCVSIPSSIAYNKFIEDSKK 205
+ V+IP+ + YN F ++
Sbjct: 116 ILVAIPAMMFYNGFGRKVEE 135
>gi|163743693|ref|ZP_02151068.1| MotA/TolQ/ExbB proton channel [Phaeobacter gallaeciensis 2.10]
gi|161383060|gb|EDQ07454.1| MotA/TolQ/ExbB proton channel [Phaeobacter gallaeciensis 2.10]
Length = 336
Score = 73.7 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 40/194 (20%), Positives = 75/194 (38%), Gaps = 18/194 (9%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITL----RRQFREFEQLFWSGQSLETVCKSLKNHHNIG 83
I + S+++ ++I+ K + R + F G+ +T ++ I
Sbjct: 139 IWAIAALSVITLALILWKIWRLALIGAWSRGKAGRAVAAFERGEQ-DTARDIVRGRRGIR 197
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
+ + S +DR L L L +++
Sbjct: 198 SKVVASALASVCTLP-----------EDRAREETARVAKLHLASAGTGLGALELIATIAP 246
Query: 144 LVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIE 201
L+G+LG VLGM+ FQ++ AG ++ + GI E+L++ G+ V+IP+S A F
Sbjct: 247 LLGLLGTVLGMIAAFQALQAAGSKADPALLAGGIWEALLTTAAGMAVAIPASAALTWFEA 306
Query: 202 DSKKFAMQMEGFAN 215
+ +E A
Sbjct: 307 VITRIRRDVEDSAT 320
>gi|168702794|ref|ZP_02735071.1| hypothetical protein GobsU_24916 [Gemmata obscuriglobus UQM 2246]
Length = 242
Score = 73.7 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 28/202 (13%), Positives = 77/202 (38%), Gaps = 18/202 (8%)
Query: 29 TLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG---QSLETVCKSLKNHHNIGLA 85
L I S+++ +++I + + + + +F +F ++ K + +
Sbjct: 16 IPLVIMSLIAGALVIWRILLNNSAKTDMDDFLPVFQQTLRKGGVKAAIALCKEEKGLIPS 75
Query: 86 AIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLV 145
+F++ + + RS + + + L+ + +++ +V
Sbjct: 76 RLFVAGLEAADQGAAAMRRSMANENE----------LEIVPRLHFLLAPILAIAKIATMV 125
Query: 146 GILGAVLGMMGFFQSIAGYYSNNVVS-----IPGIIESLISILLGLCVSIPSSIAYNKFI 200
G+ V+ M+ F +I + I +L + LGL +IP ++ F
Sbjct: 126 GLFFTVISMINTFNAIGEGAATGKAKEIGGHASKIGLALFATALGLFTAIPLVFSHVLFK 185
Query: 201 EDSKKFAMQMEGFANEFSAILS 222
E KF ++++ + + +++
Sbjct: 186 EWIAKFEIRVKSSSQKLITLVT 207
>gi|262196578|ref|YP_003267787.1| MotA/TolQ/ExbB proton channel [Haliangium ochraceum DSM 14365]
gi|262079925|gb|ACY15894.1| MotA/TolQ/ExbB proton channel [Haliangium ochraceum DSM 14365]
Length = 223
Score = 73.3 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 29/187 (15%), Positives = 76/187 (40%), Gaps = 16/187 (8%)
Query: 40 SVIIQKSVNFI-TLRRQFREFEQLFWS--GQSLETVCKSLKNHHNIGLAAIFMSAMSEWK 96
++I+++++ F+ + F + + K L + +A + + ++
Sbjct: 28 AIIVERAIYFLGRGHINAKAFLEQIKRLLAANKIDRAKKLCDATTAPVARVAKAGLNRIH 87
Query: 97 KSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMG 156
+ + + + M+ + E+ ++S L SM++ L G+LG + G++
Sbjct: 88 RG-----------EAAVAQAMEETMVDVTPEVKTRISALWSMANIVTLTGLLGTITGLIN 136
Query: 157 FFQSIAGYYSNNVV--SIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFA 214
F ++A + GI E++ + GL +++ +A+ K+ +E F+
Sbjct: 137 TFSAVAESNPADRQRNLSLGISEAMYNTAYGLSIALICMLAHLMLSTAMKRVVGDLESFS 196
Query: 215 NEFSAIL 221
+L
Sbjct: 197 LRLENML 203
>gi|167625524|ref|YP_001675818.1| MotA/TolQ/ExbB proton channel [Shewanella halifaxensis HAW-EB4]
gi|167355546|gb|ABZ78159.1| MotA/TolQ/ExbB proton channel [Shewanella halifaxensis HAW-EB4]
Length = 485
Score = 73.3 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 35/199 (17%), Positives = 87/199 (43%), Gaps = 6/199 (3%)
Query: 27 IITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAA 86
++ + I + L V + ++V R + + L+ + L N + A+
Sbjct: 277 VLWPILILAALGLVVALWRAVMLF-YWRPLAQLSDKDGTQVDLQAIKLQLSNMTRVPAAS 335
Query: 87 IFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAR----ELEEITEKLSFLGSMSSAG 142
+ +A++ + + +D MD + + ++ + L F+ +++
Sbjct: 336 VLANAITSSSTHSSTNSSTNSNNRDGGVEAMDQRLKQLMLKQMAQFERGLGFIALLAAMA 395
Query: 143 LLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISILLGLCVSIPSSIAYNKFIE 201
++G+LG V GM+ FQS+ + +++ + GI ++LI+ GL V++P + +
Sbjct: 396 PMLGLLGTVSGMIETFQSLTEFGNSDPKLLSEGISKALITTQAGLLVALPLLLLHYPLKR 455
Query: 202 DSKKFAMQMEGFANEFSAI 220
++ ++ ME + A+
Sbjct: 456 RAQALSLNMEQQSALLLAL 474
>gi|311695028|gb|ADP97901.1| biopolymer transport protein [marine bacterium HP15]
Length = 235
Score = 73.3 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 30/208 (14%), Positives = 78/208 (37%), Gaps = 13/208 (6%)
Query: 17 FMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSL 76
F + G + + + I+ V I++ V + R + + +L
Sbjct: 9 FQEGGFF----MFPIAVVLIVGLIVAIERYVYLSAQKLTNRRDFNRLHQMIAKRDLKGAL 64
Query: 77 KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLG 136
G A M + + +G ++ I+ M+ + + + ++ +L
Sbjct: 65 NYTQESGSAMSTMIGFGLQRLARRQG-------REEIEYAMEEGLLDVMPRLEKRTQYLA 117
Query: 137 SMSSAGLLVGILGAVLGMMGFFQSIAGY--YSNNVVSIPGIIESLISILLGLCVSIPSSI 194
++++ L+G+LG ++G++ F ++A + I ++ + GL +IP +
Sbjct: 118 TLANIATLLGLLGTIIGLIAAFTAVAAADPAQKASLLSQSISVAMNTTAFGLMSAIPMLL 177
Query: 195 AYNKFIEDSKKFAMQMEGFANEFSAILS 222
++ + + E + +LS
Sbjct: 178 IHSLLQTKTNEIVDSFEMAGIKVLNLLS 205
>gi|251793271|ref|YP_003007999.1| TonB-system energizer ExbB [Aggregatibacter aphrophilus NJ8700]
gi|247534666|gb|ACS97912.1| TonB-system energizer ExbB [Aggregatibacter aphrophilus NJ8700]
Length = 156
Score = 73.3 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 19/79 (24%), Positives = 37/79 (46%), Gaps = 2/79 (2%)
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYS--NNVVSIPGIIESLISILLG 185
+ L+ + ++ + VG+LG V+G++ F I + + + +L + LG
Sbjct: 56 LNRNLTVVSTVGANAPYVGLLGTVIGILLTFYQIGQSGGEVDAGEIMLHLSLALKATALG 115
Query: 186 LCVSIPSSIAYNKFIEDSK 204
+ V+IPS I YN +
Sbjct: 116 ILVAIPSMIFYNALGRKVE 134
>gi|268680189|ref|YP_003304620.1| tonB-system energizer ExbB [Sulfurospirillum deleyianum DSM 6946]
gi|268618220|gb|ACZ12585.1| tonB-system energizer ExbB [Sulfurospirillum deleyianum DSM 6946]
Length = 144
Score = 73.3 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 24/89 (26%), Positives = 42/89 (47%), Gaps = 2/89 (2%)
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFF--QSIAGYYSNNVVSIPGIIESLISIL 183
++++ L+ + M S VG+LG V G+M F ++G + I G+ +L
Sbjct: 50 RDVSKNLTIISLMGSNAPYVGLLGTVGGIMVVFYDIGMSGGALDTSKVIVGLALALKVTA 109
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEG 212
GL V+IPS++ Y F+ + E
Sbjct: 110 AGLLVAIPSTMIYGGFMRKVDVAVSEWED 138
>gi|32265930|ref|NP_859962.1| biopolymer transport protein [Helicobacter hepaticus ATCC 51449]
gi|32261979|gb|AAP77028.1| biopolymer transport protein [Helicobacter hepaticus ATCC 51449]
Length = 187
Score = 73.3 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 19/79 (24%), Positives = 38/79 (48%)
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILL 184
++ T L FL ++S +G+ G V+ ++ F + G + V P I ++L++
Sbjct: 91 TQKATSSLVFLSIIASTAPFIGLFGTVVEILEAFSYLGGGNVSFDVIAPVISKALVATAT 150
Query: 185 GLCVSIPSSIAYNKFIEDS 203
G+ V+IP+ + S
Sbjct: 151 GILVAIPAYSFHLLLKRKS 169
>gi|269962824|ref|ZP_06177164.1| TonB system transport protein ExbB1 [Vibrio harveyi 1DA3]
gi|269832378|gb|EEZ86497.1| TonB system transport protein ExbB1 [Vibrio harveyi 1DA3]
Length = 232
Score = 73.3 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 33/194 (17%), Positives = 70/194 (36%), Gaps = 26/194 (13%)
Query: 29 TLLFIFSILSWSVIIQKSVN----FITLRRQFREFEQLF--WSGQSLETVCKSLKNHHNI 82
L I S L+ +I ++ +R R+ + + +E + L +
Sbjct: 16 WPLVICSALTVMIIAERLFQVFISLGVGKRAIRQKLNNLDPTNNKDIEALADELSGKRPL 75
Query: 83 ---GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMS 139
G+A + A + KS + A + + ++ L L +
Sbjct: 76 LYRGVAMLL--AHHSFSKSLREDAAGIW-------------LQEKRHQLHSGLRLLTLIG 120
Query: 140 SAGLLVGILGAVLGMMGFFQSIAGYYSNNV--VSIPGIIESLISILLGLCVSIPSSIAYN 197
L+G+LG VLG++ F+ IA N G+ ++ + GL +++P+
Sbjct: 121 VISPLIGLLGTVLGLIDMFKGIASSTGNITPNDLADGLGLAMRTTAAGLIIALPAISGAQ 180
Query: 198 KFIEDSKKFAMQME 211
+ + ++E
Sbjct: 181 LIGLWADRVIAKLE 194
>gi|78485963|ref|YP_391888.1| MotA/TolQ/ExbB proton channel [Thiomicrospira crunogena XCL-2]
gi|78364249|gb|ABB42214.1| Biopolymer transport ExbB protein [Thiomicrospira crunogena XCL-2]
Length = 170
Score = 73.3 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 21/85 (24%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSN-NVVSIPGIIESLISILLGLC 187
T L+ + S+ S VG+LG VLG++ F + + G+ +L + G+
Sbjct: 76 TNNLTTIASIGSNAPYVGLLGTVLGILVTFYELGLNNQIETGQIMMGLALALKATAGGIA 135
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEG 212
++IPS I YN + ++ +
Sbjct: 136 LAIPSIIIYNGLLRKVDVIELEYQA 160
>gi|15603051|ref|NP_246123.1| ExbB [Pasteurella multocida subsp. multocida str. Pm70]
gi|12721537|gb|AAK03270.1| ExbB [Pasteurella multocida subsp. multocida str. Pm70]
Length = 152
Score = 73.3 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 20/105 (19%), Positives = 48/105 (45%), Gaps = 4/105 (3%)
Query: 112 RIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYS--NNV 169
R++ +I ++ L+ + ++ S VG+LG V+G++ F + +
Sbjct: 40 RVNVASYESIHELDIDLQRHLTAISTIGSNAPYVGLLGTVIGILLTFYELGHSGGDIDAA 99
Query: 170 VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFA 214
+ + +L + +G+ V+IP+ + YN + +++ FA
Sbjct: 100 AIMVHLSLALKATAVGILVAIPAMVCYNGLGRKVE--VNRLKWFA 142
>gi|313681889|ref|YP_004059627.1| cell division and transport-associated protein tolq [Sulfuricurvum
kujiense DSM 16994]
gi|313154749|gb|ADR33427.1| Cell division and transport-associated protein TolQ [Sulfuricurvum
kujiense DSM 16994]
Length = 188
Score = 73.3 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 18/106 (16%), Positives = 45/106 (42%)
Query: 114 DRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP 173
+ D+A +E T+ L FL ++S +G+ G V+ ++ F I +
Sbjct: 80 TSLFDMASYAATKEATKGLMFLSVVASTTPFIGLFGTVVSILSTFDHIGQASGTMSIIAS 139
Query: 174 GIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
G+ ++L++ G+ V+I + + + + + + + +
Sbjct: 140 GVSDALVATASGIFVAIFAYTYHQILKRKAFELSGLIRMQGDALLS 185
>gi|163736797|ref|ZP_02144215.1| MotA/TolQ/ExbB proton channel [Phaeobacter gallaeciensis BS107]
gi|161389401|gb|EDQ13752.1| MotA/TolQ/ExbB proton channel [Phaeobacter gallaeciensis BS107]
Length = 336
Score = 73.3 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 40/194 (20%), Positives = 75/194 (38%), Gaps = 18/194 (9%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITL----RRQFREFEQLFWSGQSLETVCKSLKNHHNIG 83
I + S+++ ++I+ K+ + R F G+ +T ++ I
Sbjct: 139 IWAIAALSVITLALILWKTWRLALIGAWSRGMAGRAVAAFERGEQ-DTARDIVRGRRGIR 197
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
+ + S +DR L L L +++
Sbjct: 198 SKVVASALASVCTLP-----------EDRAREETARVAKLHLASAGTGLGALELIATIAP 246
Query: 144 LVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIE 201
L+G+LG VLGM+ FQ++ AG ++ + GI E+L++ G+ V+IP+S A F
Sbjct: 247 LLGLLGTVLGMIAAFQALQAAGSKADPALLAGGIWEALLTTAAGMAVAIPASAALTWFEA 306
Query: 202 DSKKFAMQMEGFAN 215
+ +E A
Sbjct: 307 VITRIRRDVEDSAT 320
>gi|317503831|ref|ZP_07961842.1| MotA/TolQ/ExbB proton channel family protein [Prevotella salivae
DSM 15606]
gi|315665058|gb|EFV04714.1| MotA/TolQ/ExbB proton channel family protein [Prevotella salivae
DSM 15606]
Length = 278
Score = 73.3 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 40/210 (19%), Positives = 87/210 (41%), Gaps = 19/210 (9%)
Query: 13 IFALFMQMGLAVKCIITLLF---IFSILSWSVIIQKSVNFITL--RRQFREFE---QLFW 64
++ + G+ V I TLL SI ++ + T + +F +
Sbjct: 59 VWGTIFKGGMIVPVIHTLLLTVLAMSI-------ERVLAMKTAFGKGSLPKFVLNIKAAL 111
Query: 65 SGQSLETVCKSLKNHHNIGLAAIFMSAMSEWK--KSCDKGARSPIGIQDRIDRMMDVAIA 122
+ + L + +A + ++++ +K ++ + +I + + A
Sbjct: 112 NANDFAKA-QQLCDQQRGSVANVVSASLNAYKDMETGANASLKKAQKIAKIQQAHEEATQ 170
Query: 123 RELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI-AGYYSNNVVSIPGIIESLIS 181
E+ +T L + ++ + G L G+LG V GM+ F ++ AG +++ GI E+LI+
Sbjct: 171 LEMPTLTMNLPIIATIVTLGTLTGLLGTVTGMIKSFSALSAGGGADSAALSAGISEALIN 230
Query: 182 ILLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
G+ S + ++YN F K ++
Sbjct: 231 TAFGILTSWCAVVSYNYFTNKVDKLTYALD 260
>gi|187734798|ref|YP_001876910.1| MotA/TolQ/ExbB proton channel [Akkermansia muciniphila ATCC
BAA-835]
gi|187424850|gb|ACD04129.1| MotA/TolQ/ExbB proton channel [Akkermansia muciniphila ATCC
BAA-835]
Length = 216
Score = 73.3 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 31/191 (16%), Positives = 85/191 (44%), Gaps = 11/191 (5%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAI 87
+L + ++ + +V+ ++ + F ++ +F + + + + K A+I
Sbjct: 12 FWVLSVLAVYALAVVAERILYFHRIQINTGDFLRG------ISKLVNAGKTDEARHEASI 65
Query: 88 FMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGI 147
+ S A ++ + + + ++ E+ +I + + L +++ LVG+
Sbjct: 66 LPGPAARVVSSVLAHAGLR---REELRTVAEDSVQMEVFQIEKNIRGLLVVATVSPLVGV 122
Query: 148 LGAVLGMMGFFQ--SIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKK 205
LG + G++GF+ + + ++ + ++L+S LGL ++IP+ + Y+ S++
Sbjct: 123 LGTIQGLVGFYSQPGVLEGKAPSLAMSDAVYQALLSSALGLSIAIPAYLFYSYLASRSRQ 182
Query: 206 FAMQMEGFANE 216
+E E
Sbjct: 183 IVHSLERAGTE 193
>gi|255321981|ref|ZP_05363131.1| transcription elongation factor GreA [Campylobacter showae RM3277]
gi|255301085|gb|EET80352.1| transcription elongation factor GreA [Campylobacter showae RM3277]
Length = 135
Score = 73.3 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 52/112 (46%), Gaps = 13/112 (11%)
Query: 117 MDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV--VSIPG 174
+ VA++ T +++L ++S +G+ G V+ ++ F + N+ V P
Sbjct: 26 LSVAVSIAERNATSGITWLSIVASTSPFIGLFGTVVSILETFSQLGQGGGNSSLNVIAPA 85
Query: 175 IIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
I E+L++ G+ V+IP+ F++ ++ A E ++ R+ +
Sbjct: 86 ISEALVATGAGIFVAIPAY-----------TFSLLIKRKAYELMGVIRREVD 126
>gi|145631073|ref|ZP_01786848.1| transport protein ExbB [Haemophilus influenzae R3021]
gi|144983358|gb|EDJ90840.1| transport protein ExbB [Haemophilus influenzae R3021]
Length = 150
Score = 73.3 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 18/79 (22%), Positives = 38/79 (48%), Gaps = 2/79 (2%)
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYS--NNVVSIPGIIESLISILLG 185
+ ++ + ++ + VG+LG V+G++ F I + V + + +L + LG
Sbjct: 56 LNRNMTVISTIGANAPYVGLLGTVIGILLTFYQIGHGGGDIDPSVIMLHLSLALKATALG 115
Query: 186 LCVSIPSSIAYNKFIEDSK 204
+ V+IPS + YN +
Sbjct: 116 ILVAIPSMVFYNGLGRKVE 134
>gi|260777293|ref|ZP_05886187.1| ferric siderophore transport system biopolymer transport protein
ExbB [Vibrio coralliilyticus ATCC BAA-450]
gi|260606959|gb|EEX33233.1| ferric siderophore transport system biopolymer transport protein
ExbB [Vibrio coralliilyticus ATCC BAA-450]
Length = 229
Score = 73.3 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 31/191 (16%), Positives = 66/191 (34%), Gaps = 20/191 (10%)
Query: 29 TLLFIFSILSWSVIIQKSVN----FITLRRQFREFEQLFWSG--QSLETVCKSLKNHHNI 82
L I S L+ +I ++ +R R Q LE + + L +
Sbjct: 16 WPLIICSALTVMIITERLFQVMISLGVGKRAIRNELNQISPSDKQQLEALAEKLSPRRPL 75
Query: 83 GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAG 142
+ M + S + +D + + ++ L L +
Sbjct: 76 LYKGVAM--------LLAHHSFSKVLREDAAGMWLQ----EKRHQLNSGLRLLTLIGVIS 123
Query: 143 LLVGILGAVLGMMGFFQSIAGYYSNNV--VSIPGIIESLISILLGLCVSIPSSIAYNKFI 200
L+G+LG VLG++ F+ +A + G+ ++ + GL +++P+
Sbjct: 124 PLIGLLGTVLGLIEMFKGVAASTGSITPNDLADGLGLAMRTTAAGLLIALPAIAGAQLLG 183
Query: 201 EDSKKFAMQME 211
+ K ++E
Sbjct: 184 LWADKVMAKLE 194
>gi|7716523|gb|AAF68417.1|AF237931_1 biopolymer transport protein ExbB [Pasteurella multocida]
gi|32351477|gb|AAP76318.1| ExbB [Pasteurella multocida]
Length = 152
Score = 72.9 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 20/105 (19%), Positives = 48/105 (45%), Gaps = 4/105 (3%)
Query: 112 RIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYS--NNV 169
R++ +I ++ L+ + ++ S VG+LG V+G++ F + +
Sbjct: 40 RVNVASYESIHELDIDLQRHLTAISTIGSNAPYVGLLGTVIGILLTFYELGHSGGDIDAA 99
Query: 170 VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFA 214
+ + +L + +G+ V+IP+ + YN + +++ FA
Sbjct: 100 AIMVHLSLALKATAVGILVAIPAMVCYNGLGRKVE--VNRLKWFA 142
>gi|109946885|ref|YP_664113.1| biopolymer transport protein [Helicobacter acinonychis str. Sheeba]
gi|109714106|emb|CAJ99114.1| biopolymer transport protein [Helicobacter acinonychis str. Sheeba]
Length = 146
Score = 72.9 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVS-IPGIIESLISILLGL 186
+T+ L+ L + S VG+LG VLG+M F + + + + G+ +L + LGL
Sbjct: 58 LTKNLTILYVIYSNAPYVGLLGTVLGVMVTFYDMGISEGMDAKTIMVGLSLALKATALGL 117
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQ 209
V+IP+ IAYN + S + +
Sbjct: 118 AVAIPTLIAYNGLLRKSDVLSEK 140
>gi|157737827|ref|YP_001490511.1| biopolymer transport protein ExbB [Arcobacter butzleri RM4018]
gi|315637617|ref|ZP_07892823.1| MotA/TolQ/ExbB proton channel family protein [Arcobacter butzleri
JV22]
gi|157699681|gb|ABV67841.1| biopolymer transport protein ExbB [Arcobacter butzleri RM4018]
gi|315478071|gb|EFU68798.1| MotA/TolQ/ExbB proton channel family protein [Arcobacter butzleri
JV22]
Length = 186
Score = 72.9 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 29/209 (13%), Positives = 70/209 (33%), Gaps = 29/209 (13%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLET 71
++ ++ LL S +++ +
Sbjct: 4 TLLNYLANSSAITYIVLALL------SVYIVLTFWIFLHR------------------NN 39
Query: 72 VCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEK 131
V SL ++ L A+ S + I ++ ++ +++ +
Sbjct: 40 VLSSLISNEKRSLEALTSRETRFSPLSALNKCSNNIASKE----LLHACEINIIKDASSG 95
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-VVSIPGIIESLISILLGLCVSI 190
LS+L +SS +G+ G V+G++ F A + P I E+L++ G+ V+I
Sbjct: 96 LSWLAIISSTSPFIGLFGTVIGILESFAKFANQSKVAFSIIAPAISEALVATAAGILVAI 155
Query: 191 PSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
+ + + ++ ++ + A
Sbjct: 156 FAYTFHQILSRKVYELSIFLKAQSQILIA 184
>gi|91228743|ref|ZP_01262654.1| ExbB-like protein [Vibrio alginolyticus 12G01]
gi|91187689|gb|EAS74010.1| ExbB-like protein [Vibrio alginolyticus 12G01]
gi|175362672|gb|ACB72439.1| periplasmic protein TonB1 [Vibrio alginolyticus]
Length = 232
Score = 72.9 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 35/192 (18%), Positives = 71/192 (36%), Gaps = 22/192 (11%)
Query: 29 TLLFIFSILSWSVIIQKSV----NFITLRRQFREFEQLF--WSGQSLETVCKSLKNHHNI 82
L I S L+ +I ++ + +R R+ +G LE + + L N +
Sbjct: 16 WPLIICSALTVMIIAERLFHVLISLGVGKRAIRQKLTGLDPTNGSELEALAEELSNKRPL 75
Query: 83 GLAAIFMS-AMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSA 141
+ M A + KS + A + + ++ L L +
Sbjct: 76 LYRGVAMLLAHHSFSKSLREDAAGIW-------------LQEKRHQLHSGLRLLTLIGVI 122
Query: 142 GLLVGILGAVLGMMGFFQSIAGYYSNNV--VSIPGIIESLISILLGLCVSIPSSIAYNKF 199
L+G+LG VLG++ F+ IA N G+ ++ + GL +++P+
Sbjct: 123 SPLIGLLGTVLGLIDMFKGIAVSTGNITPNDLADGLGLAMRTTAAGLIIALPAISGAQII 182
Query: 200 IEDSKKFAMQME 211
+ + ++E
Sbjct: 183 GLWADRVIAKLE 194
>gi|254456959|ref|ZP_05070387.1| tonB-system energizer ExbB [Campylobacterales bacterium GD 1]
gi|207085751|gb|EDZ63035.1| tonB-system energizer ExbB [Campylobacterales bacterium GD 1]
Length = 149
Score = 72.9 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 18/85 (21%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV-SIPGIIESLISILLGL 186
+T+ + + ++ + VG+LG V+G+M F ++ + + + G+ +L + +GL
Sbjct: 57 LTDNIGVISAIGANAPYVGLLGTVVGIMITFYTMGDVGAVDAKKIMTGLALALKATAMGL 116
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQME 211
V++P+ +AY + +K +
Sbjct: 117 IVAMPAIVAYTIVLRKVEKILTAYD 141
>gi|158338016|ref|YP_001519192.1| biopolymer transport ExbB [Acaryochloris marina MBIC11017]
gi|158308257|gb|ABW29874.1| biopolymer transport ExbB, putative [Acaryochloris marina
MBIC11017]
Length = 222
Score = 72.5 bits (177), Expect = 4e-11, Method: Composition-based stats.
Identities = 37/218 (16%), Positives = 74/218 (33%), Gaps = 20/218 (9%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG--QS 68
++I LF + G I L SIL+ + ++ + L + R+ + +
Sbjct: 1 MNIIELFEKGGP----TIWPLLGLSILAIGTVFERLWFWSNLLKGERKTAKQILDAARRD 56
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ + N + R + ++ + EL +
Sbjct: 57 WDEATHLARQFSNQPIGRFLF-----------TPLRLANQEPEIFRLALEASADEELTAM 105
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA--GYYSNNVVSIPGIIESLISILLGL 186
+ L ++ + L+G+ G +LG+ + + GI ++L S L+GL
Sbjct: 106 RKGSKVLEAVIALSPLLGLFGTILGLQNSLGKLNFEEFGQIVGNPALGIDQALTSTLVGL 165
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
++I S Y F A NE ++ RQ
Sbjct: 166 AIAIVSLTFYRLFQGLVFNQARIFRRTGNEL-ELVYRQ 202
>gi|269966082|ref|ZP_06180172.1| TonB system transport protein ExbB1 [Vibrio alginolyticus 40B]
gi|269829229|gb|EEZ83473.1| TonB system transport protein ExbB1 [Vibrio alginolyticus 40B]
Length = 232
Score = 72.5 bits (177), Expect = 4e-11, Method: Composition-based stats.
Identities = 35/192 (18%), Positives = 71/192 (36%), Gaps = 22/192 (11%)
Query: 29 TLLFIFSILSWSVIIQKSV----NFITLRRQFREFEQLF--WSGQSLETVCKSLKNHHNI 82
L I S L+ +I ++ + +R R+ +G LE + + L N +
Sbjct: 16 WPLIICSALTVMIIAERLFHVLISLGVGKRAIRQKLTGLDPTNGSELEALAEELSNKRPL 75
Query: 83 GLAAIFMS-AMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSA 141
+ M A + KS + A + + ++ L L +
Sbjct: 76 LYRGVAMLLAHHSFSKSLREDAAGIW-------------LQEKRHQLHSGLRLLTLIGVI 122
Query: 142 GLLVGILGAVLGMMGFFQSIAGYYSNNV--VSIPGIIESLISILLGLCVSIPSSIAYNKF 199
L+G+LG VLG++ F+ IA N G+ ++ + GL +++P+
Sbjct: 123 SPLIGLLGTVLGLIDMFKGIAVSTGNITPNDLADGLGLAMRTTAAGLIIALPAISGAQII 182
Query: 200 IEDSKKFAMQME 211
+ + ++E
Sbjct: 183 GLWADRVIAKLE 194
>gi|323344718|ref|ZP_08084942.1| MotA/TolQ/ExbB proton channel family protein [Prevotella oralis
ATCC 33269]
gi|323093988|gb|EFZ36565.1| MotA/TolQ/ExbB proton channel family protein [Prevotella oralis
ATCC 33269]
Length = 279
Score = 72.5 bits (177), Expect = 4e-11, Method: Composition-based stats.
Identities = 42/216 (19%), Positives = 90/216 (41%), Gaps = 12/216 (5%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITL--RRQFREF 59
+ G A+++ ++ + G+ V I TLL +L SV ++ + R +F
Sbjct: 52 DPTG-AVLNGNLLGTIYKGGMVVPIIHTLLLT--VLCLSV--ERWLAIRNAFGRGSLTKF 106
Query: 60 E---QLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRM 116
+ ++L + +A + +++ +K+ +I +
Sbjct: 107 VTNIKAALKANDFNEA-QALCDKMKGSVANVVSASLKAYKEQEATSGVKKAQKVAKIQQA 165
Query: 117 MDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GI 175
+ A E+ + L + ++ + G L G+LG V GM+ F ++A + +++ GI
Sbjct: 166 HEEATQLEMPTLQMNLPIIATIVTLGTLTGLLGTVTGMIKSFAALAAGGGGDSLALSTGI 225
Query: 176 IESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
E+LI+ G+ S + I+YN F K ++
Sbjct: 226 SEALINTAFGILTSWCAVISYNYFTNKIDKLTYALD 261
>gi|88797446|ref|ZP_01113035.1| MotA/TolQ/ExbB proton channel family protein [Reinekea sp. MED297]
gi|88779618|gb|EAR10804.1| MotA/TolQ/ExbB proton channel family protein [Reinekea sp. MED297]
Length = 233
Score = 72.5 bits (177), Expect = 4e-11, Method: Composition-based stats.
Identities = 33/183 (18%), Positives = 71/183 (38%), Gaps = 16/183 (8%)
Query: 43 IQKSVNFITLRRQFREFEQL---FWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSC 99
K +R + +W SL+ + + AM ++
Sbjct: 44 FIKLWQLAQIRPESDAGLTQALSYWRQGERALALNSLQGDR--PVTDMVRFAMQNLEQGV 101
Query: 100 DKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQ 159
D G + + ++++ L L ++ L+G+LG V GM+ FQ
Sbjct: 102 DAGYLAHE---------LSRQANVLVQQLRAYLRPLDVIAGLSPLLGLLGTVSGMILAFQ 152
Query: 160 SI--AGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEF 217
+ AG + + GI ++L++ GL V+IP + A++ F +++ + ++ +
Sbjct: 153 QMETAGRQVDPSILSGGIWQALLTTAAGLVVAIPVATAHSWFERKAERVSHRLNDAFTQL 212
Query: 218 SAI 220
A+
Sbjct: 213 VAV 215
>gi|294055799|ref|YP_003549457.1| MotA/TolQ/ExbB proton channel [Coraliomargarita akajimensis DSM
45221]
gi|293615132|gb|ADE55287.1| MotA/TolQ/ExbB proton channel [Coraliomargarita akajimensis DSM
45221]
Length = 472
Score = 72.5 bits (177), Expect = 4e-11, Method: Composition-based stats.
Identities = 33/136 (24%), Positives = 61/136 (44%), Gaps = 3/136 (2%)
Query: 98 SCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGF 157
G + ++ ++ I + L F+ ++A L+G+LG V GM+
Sbjct: 337 LLAAGVEHAEEKRGTLEEILYEKILACRPRLERFLPFMALTAAAAPLLGLLGTVTGMIKT 396
Query: 158 FQSIAGYYSNNVVSI-PGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANE 216
F I + + + S+ GI E+L++ LGL V+IPS I + +++ ME A
Sbjct: 397 FNLITIFGTGDAKSLSSGISEALVTTELGLVVAIPSLILHGLLSRMARQKMGDMEQGAVG 456
Query: 217 FSAIL--SRQTEGNIS 230
F + SR + + +
Sbjct: 457 FINGVVGSRNKDQDAA 472
>gi|224418197|ref|ZP_03656203.1| EXBB\TOLQ family transport protein [Helicobacter canadensis MIT
98-5491]
gi|253827524|ref|ZP_04870409.1| ExbB / TolQ family transport protein [Helicobacter canadensis MIT
98-5491]
gi|313141732|ref|ZP_07803925.1| predicted protein [Helicobacter canadensis MIT 98-5491]
gi|253510930|gb|EES89589.1| ExbB / TolQ family transport protein [Helicobacter canadensis MIT
98-5491]
gi|313130763|gb|EFR48380.1| predicted protein [Helicobacter canadensis MIT 98-5491]
Length = 188
Score = 72.5 bits (177), Expect = 4e-11, Method: Composition-based stats.
Identities = 21/90 (23%), Positives = 48/90 (53%), Gaps = 2/90 (2%)
Query: 114 DRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSI 172
+ ++ + + ++E T L+FLG ++S +G+ G V+ ++ F + + V
Sbjct: 77 ESLLQYFLNKTIKEATIGLTFLGIVASTAPFIGLFGTVVEILEAFSKLGMESKATLDVIA 136
Query: 173 PGIIESLISILLGLCVSIPSSIAYNKFIED 202
P I ++LI+ G+ +IP+ ++N F++
Sbjct: 137 PIISKALIATAAGILTAIPAY-SFNLFLKR 165
>gi|213422645|ref|ZP_03355707.1| biopolymer transport protein ExbB [Salmonella enterica subsp.
enterica serovar Typhi str. E01-6750]
Length = 51
Score = 72.5 bits (177), Expect = 4e-11, Method: Composition-based stats.
Identities = 14/46 (30%), Positives = 28/46 (60%)
Query: 6 LAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFIT 51
L D+S++ ++ + VKC++ L + S+++W++ KSV F T
Sbjct: 5 LMQTDLSVWGMYQHADIVVKCVMIGLILASVVTWAIFFSKSVEFFT 50
>gi|56681397|gb|AAW21308.1| ExbB2 [Actinobacillus suis]
gi|56681401|gb|AAW21311.1| ExbB2 [Actinobacillus suis]
Length = 150
Score = 72.5 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 19/105 (18%), Positives = 48/105 (45%), Gaps = 8/105 (7%)
Query: 109 IQDRI--DRMMDVAIARELEEIT----EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA 162
I +R+ + +DV ++++ L+ + ++ + +G+LG VLG++ F +
Sbjct: 31 IIERVLFYKQLDVTKYETIQDLEIDTTRNLTTISTIGANAPYIGLLGTVLGILLTFYHLG 90
Query: 163 GYYSNNVVS--IPGIIESLISILLGLCVSIPSSIAYNKFIEDSKK 205
+ + + +L + G+ V+IP+ + Y+ F +
Sbjct: 91 HSGGEIDAASIMVHLSLALKATAAGILVAIPAMMFYSGFNRKVDE 135
>gi|157963338|ref|YP_001503372.1| MotA/TolQ/ExbB proton channel [Shewanella pealeana ATCC 700345]
gi|157848338|gb|ABV88837.1| MotA/TolQ/ExbB proton channel [Shewanella pealeana ATCC 700345]
Length = 469
Score = 72.1 bits (176), Expect = 5e-11, Method: Composition-based stats.
Identities = 31/161 (19%), Positives = 74/161 (45%), Gaps = 13/161 (8%)
Query: 67 QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
L + + L++ + A + +A+ E D +D+ + + +++
Sbjct: 316 ADLLKIKQQLQSVSRVPAAKVLANAIVE------------GSCVDAMDQRLKQLMLKQMA 363
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISILLG 185
+ L F+ +++ ++G+LG V GM+ FQS+ + +++ + GI ++LI+ G
Sbjct: 364 QFERGLGFIALLAAMAPMLGLLGTVSGMIETFQSLTEFGNSDPKLLSQGISKALITTQAG 423
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
L V++P + + ++ ++ ME + A+ Q E
Sbjct: 424 LLVALPLLLLHYPLKRRAQALSLNMEQQSALLLALNLEQGE 464
>gi|223038629|ref|ZP_03608922.1| ExbB\TolQ family transport protein [Campylobacter rectus RM3267]
gi|222880031|gb|EEF15119.1| ExbB\TolQ family transport protein [Campylobacter rectus RM3267]
Length = 193
Score = 72.1 bits (176), Expect = 5e-11, Method: Composition-based stats.
Identities = 34/223 (15%), Positives = 84/223 (37%), Gaps = 41/223 (18%)
Query: 6 LAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS 65
+A +DI + ++ L + I+S +V++ + V +++ + +
Sbjct: 1 MAGLDI-FLNYLSRSSFITVFVLGWLSFYFIISLTVLLSRMVGLSLWQKKEQNALESLLM 59
Query: 66 GQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
G S + S+ G + + VA++
Sbjct: 60 GGSKHILNDSVLKRFVSGSVS---------------------------KEKLSVAVSIAE 92
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV--SIPGIIESLISIL 183
T +++L ++S +G+ G V+ ++ F + N+ + P I E+L++
Sbjct: 93 RNATSGITWLSIIASTSPFIGLFGTVVSILETFSQLGQGGGNSSLGFIAPAISEALVATG 152
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
G+ V+IP+ F++ ++ A E +++ R+ +
Sbjct: 153 AGIFVAIPAY-----------TFSLLIKRKAYELMSVIRREVD 184
>gi|254360660|ref|ZP_04976809.1| TonB family auxiliary protein ExbB [Mannheimia haemolytica PHL213]
gi|3913621|sp|P72202|EXBB_PASHA RecName: Full=Biopolymer transport protein exbB
gi|1575389|gb|AAB09528.1| ExbB [Mannheimia haemolytica]
gi|110735197|gb|ABG89169.1| biopolymer transport protein [Mannheimia haemolytica]
gi|153091200|gb|EDN73205.1| TonB family auxiliary protein ExbB [Mannheimia haemolytica PHL213]
Length = 152
Score = 72.1 bits (176), Expect = 6e-11, Method: Composition-based stats.
Identities = 16/80 (20%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVS--IPGIIESLISILLG 185
+T L+ + ++ S +G+LG V+G++ F + + + + + +L + +G
Sbjct: 56 LTHNLTTISTIGSNAPYIGLLGTVVGILLTFYHLGQSGGDIDAASIMVNLSLALKATAVG 115
Query: 186 LCVSIPSSIAYNKFIEDSKK 205
+ V+I + + YN F ++
Sbjct: 116 ILVAIIAMVFYNGFGRKVEE 135
>gi|165975535|ref|YP_001651128.1| biopolymer transport protein [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
gi|165875636|gb|ABY68684.1| biopolymer transport protein [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
Length = 147
Score = 72.1 bits (176), Expect = 6e-11, Method: Composition-based stats.
Identities = 20/105 (19%), Positives = 49/105 (46%), Gaps = 8/105 (7%)
Query: 109 IQDRI--DRMMDVAIARELEEIT----EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA 162
I +R+ + +DV L+++ L+ + ++ + +G+LG VLG++ F +
Sbjct: 28 IIERVLFYKQLDVTKYDTLQDLEIDTTRNLTTISTIGANAPYIGLLGTVLGILLTFYHLG 87
Query: 163 GYYSNNVVS--IPGIIESLISILLGLCVSIPSSIAYNKFIEDSKK 205
+ + + + +L + G+ V+IP+ + Y+ F +
Sbjct: 88 HSGGDIDAASIMVHLSLALKATAAGILVAIPAMMFYSGFNRKVDE 132
>gi|149198874|ref|ZP_01875916.1| putative tolQ-type transport protein [Lentisphaera araneosa
HTCC2155]
gi|149138072|gb|EDM26483.1| putative tolQ-type transport protein [Lentisphaera araneosa
HTCC2155]
Length = 257
Score = 72.1 bits (176), Expect = 6e-11, Method: Composition-based stats.
Identities = 40/207 (19%), Positives = 79/207 (38%), Gaps = 17/207 (8%)
Query: 17 FMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG---QSLETVC 73
G I L+ + S+ + II + + + LE+
Sbjct: 44 IFGGGAVGIFIWVLILLCSLGMLAFIIDSVLILNREKILPAHLQDAVEDSLNDGDLESAI 103
Query: 74 KSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLS 133
+ + LA I ++A + + D IQD + D+ E E+I ++++
Sbjct: 104 AACEETP-SPLANILLAAFANIAEGYD-------VIQDSVSSAADL----ENEKILQRIN 151
Query: 134 FLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVS--IPGIIESLISILLGLCVSIP 191
+L G ++G+LG V GM+G F +A + I +L + + GL +SIP
Sbjct: 152 YLNVFGQMGPMLGLLGTVSGMVGAFAGLANKTGAAKATFLANQISIALWTTVAGLLISIP 211
Query: 192 SSIAYNKFIEDSKKFAMQMEGFANEFS 218
+ + Y + K ++ + +
Sbjct: 212 ALLGYTLARNAAIKITIETQSTVLDLI 238
>gi|46143306|ref|ZP_00204436.1| COG0811: Biopolymer transport proteins [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|126207566|ref|YP_001052791.1| biopolymer transport protein ExbB2 [Actinobacillus pleuropneumoniae
L20]
gi|190149347|ref|YP_001967872.1| biopolymer transporter ExbB2 [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
gi|303250212|ref|ZP_07336413.1| biopolymer transport protein ExbB2 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|303251901|ref|ZP_07338072.1| biopolymer transport protein ExbB2 [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
gi|307244880|ref|ZP_07526978.1| Biopolymer transport protein exbB [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|307247057|ref|ZP_07529110.1| Biopolymer transport protein exbB [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
gi|307249279|ref|ZP_07531274.1| Biopolymer transport protein exbB [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|307251600|ref|ZP_07533506.1| Biopolymer transport protein exbB [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|307253834|ref|ZP_07535687.1| Biopolymer transport protein exbB [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|307256099|ref|ZP_07537886.1| Biopolymer transport protein exbB [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
gi|307258290|ref|ZP_07540032.1| Biopolymer transport protein exbB [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
gi|307260532|ref|ZP_07542225.1| Biopolymer transport protein exbB [Actinobacillus pleuropneumoniae
serovar 12 str. 1096]
gi|307262661|ref|ZP_07544290.1| Biopolymer transport protein exbB [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
gi|40849960|gb|AAR95693.1| ExbB2 [Actinobacillus pleuropneumoniae]
gi|126096358|gb|ABN73186.1| biopolymer transport protein ExbB2 [Actinobacillus pleuropneumoniae
serovar 5b str. L20]
gi|189914478|gb|ACE60730.1| biopolymer transport protein ExbB2 [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
gi|302649331|gb|EFL79516.1| biopolymer transport protein ExbB2 [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
gi|302650923|gb|EFL81078.1| biopolymer transport protein ExbB2 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|306854202|gb|EFM86409.1| Biopolymer transport protein exbB [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|306856426|gb|EFM88576.1| Biopolymer transport protein exbB [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
gi|306858678|gb|EFM90739.1| Biopolymer transport protein exbB [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|306860911|gb|EFM92918.1| Biopolymer transport protein exbB [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|306863194|gb|EFM95135.1| Biopolymer transport protein exbB [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|306865280|gb|EFM97176.1| Biopolymer transport protein exbB [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
gi|306867629|gb|EFM99475.1| Biopolymer transport protein exbB [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
gi|306869761|gb|EFN01545.1| Biopolymer transport protein exbB [Actinobacillus pleuropneumoniae
serovar 12 str. 1096]
gi|306871989|gb|EFN03704.1| Biopolymer transport protein exbB [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
Length = 150
Score = 72.1 bits (176), Expect = 6e-11, Method: Composition-based stats.
Identities = 20/105 (19%), Positives = 49/105 (46%), Gaps = 8/105 (7%)
Query: 109 IQDRI--DRMMDVAIARELEEIT----EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA 162
I +R+ + +DV L+++ L+ + ++ + +G+LG VLG++ F +
Sbjct: 31 IIERVLFYKQLDVTKYDTLQDLEIDTTRNLTTISTIGANAPYIGLLGTVLGILLTFYHLG 90
Query: 163 GYYSNNVVS--IPGIIESLISILLGLCVSIPSSIAYNKFIEDSKK 205
+ + + + +L + G+ V+IP+ + Y+ F +
Sbjct: 91 HSGGDIDAASIMVHLSLALKATAAGILVAIPAMMFYSGFNRKVDE 135
>gi|242279553|ref|YP_002991682.1| MotA/TolQ/ExbB proton channel [Desulfovibrio salexigens DSM 2638]
gi|242122447|gb|ACS80143.1| MotA/TolQ/ExbB proton channel [Desulfovibrio salexigens DSM 2638]
Length = 209
Score = 72.1 bits (176), Expect = 6e-11, Method: Composition-based stats.
Identities = 45/201 (22%), Positives = 80/201 (39%), Gaps = 19/201 (9%)
Query: 27 IITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAA 86
I+ L I S++ W++ I KS+ F R +E QS + + KN
Sbjct: 20 IMIALLILSLIMWTLAIYKSLRFF--RESNKE--------QSPDNCLRMYKNEPETCRTK 69
Query: 87 IFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVG 146
+ + + D P ++ ++ R + + +++A L+G
Sbjct: 70 LPVWQFDILSEHMDANGNDPDLNRE----LLKSIRVRHEFATMCNIGTILILAAAAPLLG 125
Query: 147 ILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKK 205
+LG V GM+ F IA + + N GI E+L++ GL ++P I + +K
Sbjct: 126 LLGTVTGMISTFDVIAQFGTGNARALASGISEALVTTQSGLVAAVPGLILGGILLRKGEK 185
Query: 206 FAMQMEGFANEFSAILSRQTE 226
+ME F L QT+
Sbjct: 186 LKSRMELFC----ICLQEQTD 202
>gi|332534952|ref|ZP_08410771.1| MotA/TolQ/ExbB proton channel family protein [Pseudoalteromonas
haloplanktis ANT/505]
gi|332035625|gb|EGI72116.1| MotA/TolQ/ExbB proton channel family protein [Pseudoalteromonas
haloplanktis ANT/505]
Length = 454
Score = 72.1 bits (176), Expect = 6e-11, Method: Composition-based stats.
Identities = 38/209 (18%), Positives = 82/209 (39%), Gaps = 28/209 (13%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLET 71
++ F Q G+ I LL + +++ + ++ ++ Q +
Sbjct: 265 TLMEYFHQGGVVGYIITALLGLGMLITLIRFVDLTLTTSKIKSQLKNV------------ 312
Query: 72 VCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEK 131
+ N L I K D + + ++ +D AI RE I
Sbjct: 313 ----ATPNTNNPLGRIL-------KVYHDNKNQD----VENLELKLDEAILRETPRIEAG 357
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSI 190
++ + +++ L+G+LG V+GM+ FQ+I + + + + G I +L++ LGL ++
Sbjct: 358 INIIKILAAIAPLLGLLGTVIGMILTFQTITLFGTGDPKIMAGNISLALVTTALGLIAAL 417
Query: 191 PSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
P + + SK ++ + A
Sbjct: 418 PLILLHALVAGRSKSVLHILDEQSAGIVA 446
>gi|145635160|ref|ZP_01790865.1| transport protein ExbB [Haemophilus influenzae PittAA]
gi|145637149|ref|ZP_01792811.1| transport protein ExbB [Haemophilus influenzae PittHH]
gi|148825468|ref|YP_001290221.1| transport protein ExbB [Haemophilus influenzae PittEE]
gi|145267581|gb|EDK07580.1| transport protein ExbB [Haemophilus influenzae PittAA]
gi|145269594|gb|EDK09535.1| transport protein ExbB [Haemophilus influenzae PittHH]
gi|148715628|gb|ABQ97838.1| transport protein ExbB [Haemophilus influenzae PittEE]
Length = 150
Score = 71.8 bits (175), Expect = 6e-11, Method: Composition-based stats.
Identities = 17/79 (21%), Positives = 37/79 (46%), Gaps = 2/79 (2%)
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYS--NNVVSIPGIIESLISILLG 185
+ ++ + ++ + VG+LG V+G++ F I + + + +L + LG
Sbjct: 56 LNRNMTVISTIGANAPYVGLLGTVIGILLTFYQIGHGGGDIDPSEIMLHLSLALKATALG 115
Query: 186 LCVSIPSSIAYNKFIEDSK 204
+ V+IPS + YN +
Sbjct: 116 ILVAIPSMVFYNGLGRKVE 134
>gi|224438540|ref|ZP_03659460.1| biopolymer transport protein [Helicobacter cinaedi CCUG 18818]
gi|313144966|ref|ZP_07807159.1| biopolymer transport protein [Helicobacter cinaedi CCUG 18818]
gi|313129997|gb|EFR47614.1| biopolymer transport protein [Helicobacter cinaedi CCUG 18818]
Length = 187
Score = 71.8 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 18/79 (22%), Positives = 37/79 (46%)
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILL 184
+ T L FL ++S +G+ G V+ ++ F + G + V P I ++L++
Sbjct: 91 TQRATASLVFLSIIASTAPFIGLFGTVVEILETFSVLGGGNVSFDVIAPVISKALVATAA 150
Query: 185 GLCVSIPSSIAYNKFIEDS 203
G+ V+IP+ + +
Sbjct: 151 GILVAIPAYSFHLLLKRKA 169
>gi|254446057|ref|ZP_05059533.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Verrucomicrobiae bacterium DG1235]
gi|198260365|gb|EDY84673.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Verrucomicrobiae bacterium DG1235]
Length = 196
Score = 71.8 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 31/140 (22%), Positives = 58/140 (41%), Gaps = 7/140 (5%)
Query: 89 MSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGIL 148
A E + + G + +D ++R L I + + L A L G+L
Sbjct: 62 AHASGEIRSMIEYGKAALPYQRDVLNR-FSEVRNEHLSRIDRRRTMLAVFVGAAPLTGLL 120
Query: 149 GAVLGMMGFFQ--SIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKF 206
G V+GM+ F+ +I+ + GI E+LI+ LGL ++IP + + +K
Sbjct: 121 GTVIGMLSTFKGLAISTGGQTVNMVADGISEALITTQLGLVIAIPGYV----LLMLIEKR 176
Query: 207 AMQMEGFANEFSAILSRQTE 226
++ A ++R+
Sbjct: 177 QNALDTLIMRIEACVARKAR 196
>gi|223042127|ref|ZP_03612298.1| biopolymer transport protein ExbB2 [Actinobacillus minor 202]
gi|240948073|ref|ZP_04752483.1| biopolymer transport protein ExbB2 [Actinobacillus minor NM305]
gi|223017066|gb|EEF15507.1| biopolymer transport protein ExbB2 [Actinobacillus minor 202]
gi|240297553|gb|EER48045.1| biopolymer transport protein ExbB2 [Actinobacillus minor NM305]
Length = 149
Score = 71.8 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 15/80 (18%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVS--IPGIIESLISILLG 185
+T L+ + ++ + +G+LG V+G++ F + + + + + +L + G
Sbjct: 56 LTRNLTTISTIGANAPYIGLLGTVIGILLTFYQLGHSGGDIDAASIMVHLSLALKATAAG 115
Query: 186 LCVSIPSSIAYNKFIEDSKK 205
+ V+IP+ + Y+ F +
Sbjct: 116 ILVAIPAMMFYSGFNRKVDE 135
>gi|71280470|ref|YP_268583.1| biopolymer transport exbB protein [Colwellia psychrerythraea 34H]
gi|71146210|gb|AAZ26683.1| biopolymer transport exbB protein [Colwellia psychrerythraea 34H]
Length = 203
Score = 71.8 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 44/195 (22%), Positives = 83/195 (42%), Gaps = 13/195 (6%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIG--LA 85
+ +L SI+S S+ K FI F L+ + + S + H+ L
Sbjct: 13 LWVLIALSIISVSIASYKLAQFIWFGVANNRFYALWLEKLTNNALSASYRKKHSDTYLLN 72
Query: 86 AIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLV 145
I +++ K + +D + +M+ ++EE+ L L +S L+
Sbjct: 73 QITNHGLAQSKAHQN---------KDDFEVVMEQYATNKIEEMRGGLKTLEVISMTAPLL 123
Query: 146 GILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDS 203
G+LG VLGM+ F + +G + + GI ++L++ GL V++P+ ++ +
Sbjct: 124 GLLGTVLGMINAFDQMKNSGMQIDPSILSAGISQALLTTAAGLIVALPALSLWHLYERML 183
Query: 204 KKFAMQMEGFANEFS 218
K Q+E E S
Sbjct: 184 AKAQRQIETVLTEIS 198
>gi|288561097|ref|YP_003424583.1| transporter MotA/TolQ/ExbB proton channel family
[Methanobrevibacter ruminantium M1]
gi|288543807|gb|ADC47691.1| transporter MotA/TolQ/ExbB proton channel family
[Methanobrevibacter ruminantium M1]
Length = 279
Score = 71.8 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 23/102 (22%), Positives = 46/102 (45%), Gaps = 1/102 (0%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
+ ++ M+ EL ++T +S L ++ +G++G VLG+ F+++ G +
Sbjct: 98 KTEVEESMEQIFIVELSKMTNGISALKTIIELAPFLGLIGTVLGIWMTFKNL-GVNPDAA 156
Query: 170 VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
GI +LI+ + GL V+I Y ++E
Sbjct: 157 AMAEGIYIALITTIAGLTVAIILMPLYTYIKGLIDDEMDKIE 198
>gi|149191986|ref|ZP_01870215.1| ExbB-like protein [Vibrio shilonii AK1]
gi|148834164|gb|EDL51172.1| ExbB-like protein [Vibrio shilonii AK1]
Length = 232
Score = 71.8 bits (175), Expect = 8e-11, Method: Composition-based stats.
Identities = 36/195 (18%), Positives = 73/195 (37%), Gaps = 26/195 (13%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITL----RRQFREFEQLFW--SGQSLETVCKSLKNHHN 81
L I S L+ +II++ + R+ + + +E + K L
Sbjct: 15 AWPLIICSALTAMIIIERLFQIAISSGVGKSAIRQELNQASPVNEKEIEALAKDLVQKRP 74
Query: 82 I---GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSM 138
+ G+A + A + KS + A S + + ++ L LG +
Sbjct: 75 LLYKGVAMLL--AHHSFAKSLREDAASIW-------------LQDKRHQLHSGLRILGLI 119
Query: 139 SSAGLLVGILGAVLGMMGFFQSIAGYYSNNV--VSIPGIIESLISILLGLCVSIPSSIAY 196
L+G+LG VLG++ F+ IA N G+ ++ + GL +++P+
Sbjct: 120 GVISPLIGLLGTVLGLIEMFKGIAAASGNVTPNDLADGLGLAMRTTAAGLIIALPAIAGS 179
Query: 197 NKFIEDSKKFAMQME 211
+ + ++E
Sbjct: 180 QLIGLWADRIVAKLE 194
>gi|145632496|ref|ZP_01788230.1| transport protein ExbB [Haemophilus influenzae 3655]
gi|555671|gb|AAA81948.1| exbB [Haemophilus influenzae]
gi|144986691|gb|EDJ93243.1| transport protein ExbB [Haemophilus influenzae 3655]
Length = 150
Score = 71.8 bits (175), Expect = 8e-11, Method: Composition-based stats.
Identities = 17/79 (21%), Positives = 37/79 (46%), Gaps = 2/79 (2%)
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYS--NNVVSIPGIIESLISILLG 185
+ ++ + ++ + VG+LG V+G++ F I + + + +L + LG
Sbjct: 56 LNSNMTVISTIGANAPYVGLLGTVIGILLTFYQIGHGGGDIDPSEIMLHLSLALKATALG 115
Query: 186 LCVSIPSSIAYNKFIEDSK 204
+ V+IPS + YN +
Sbjct: 116 ILVAIPSMVFYNGLGRKVE 134
>gi|320104668|ref|YP_004180259.1| MotA/TolQ/ExbB proton channel [Isosphaera pallida ATCC 43644]
gi|319751950|gb|ADV63710.1| MotA/TolQ/ExbB proton channel [Isosphaera pallida ATCC 43644]
Length = 231
Score = 71.8 bits (175), Expect = 8e-11, Method: Composition-based stats.
Identities = 33/201 (16%), Positives = 76/201 (37%), Gaps = 17/201 (8%)
Query: 32 FIFSILSWSV----IIQKSVNFITLRRQFR-----EFEQLFWSGQSLETVCKSLKNHHNI 82
+ + +W + +I + +N L + + E G++++ K +
Sbjct: 20 ALAMLGAWGIYNWVLIHRGINKRLLSDRAAFELLNQVEAAAGGGKTIDQAIKVCQTPKYW 79
Query: 83 GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAG 142
A + A++ ++ + + + ++ V + +L+ +G++ G
Sbjct: 80 NTALGQLIAVALANRAKGLAKIKSLMVMEFHTEIISV--------LEMRLASIGTIVRMG 131
Query: 143 LLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIED 202
L+G+LG V M+ F I+G + I +L + GL ++ P + N +
Sbjct: 132 PLLGLLGTVASMIAAFARISGAEVDPKTLSGDISLALWATGSGLLIATPMMVVANHYHAK 191
Query: 203 SKKFAMQMEGFANEFSAILSR 223
+ + E EF L R
Sbjct: 192 LRHLRDRTERQLQEFVERLER 212
>gi|296121947|ref|YP_003629725.1| MotA/TolQ/ExbB proton channel [Planctomyces limnophilus DSM 3776]
gi|296014287|gb|ADG67526.1| MotA/TolQ/ExbB proton channel [Planctomyces limnophilus DSM 3776]
Length = 235
Score = 71.4 bits (174), Expect = 9e-11, Method: Composition-based stats.
Identities = 24/126 (19%), Positives = 56/126 (44%), Gaps = 3/126 (2%)
Query: 101 KGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQS 160
+R+ I + + +D E+ K+ ++ ++ + ++G+LG V GM+ F
Sbjct: 87 AASRTDIPPAEIRNFALDQFEREVQAELEHKVMWVNTVIKSAPMLGLLGTVAGMIAAFGK 146
Query: 161 IAG---YYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEF 217
IA ++ + I +LI+ +GL +++P IA + + +K +++
Sbjct: 147 IASMQKSGTDPSMLANDISLALITTAVGLVIAVPLMIAISAILIRVRKLQFEVDQILTPL 206
Query: 218 SAILSR 223
L+
Sbjct: 207 LDQLAE 212
>gi|315126909|ref|YP_004068912.1| MotA/TolQ/ExbB proton channel protein [Pseudoalteromonas sp.
SM9913]
gi|315015423|gb|ADT68761.1| MotA/TolQ/ExbB proton channel protein [Pseudoalteromonas sp.
SM9913]
Length = 454
Score = 71.4 bits (174), Expect = 9e-11, Method: Composition-based stats.
Identities = 26/110 (23%), Positives = 56/110 (50%), Gaps = 1/110 (0%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ ++ +D AI RE I ++ + +++ L+G+LG V+GM+ FQ+I + + +
Sbjct: 337 ENLELKLDEAILRETPRIEAGINIIKILAAIAPLLGLLGTVIGMILTFQTITLFGTGDPK 396
Query: 171 SIPG-IIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
+ G I +L++ LGL ++P + ++ SK ++ + A
Sbjct: 397 IMAGNISLALVTTALGLIAALPLILLHSIVAGRSKSVLHILDEQSAGIIA 446
>gi|294055798|ref|YP_003549456.1| MotA/TolQ/ExbB proton channel [Coraliomargarita akajimensis DSM
45221]
gi|293615131|gb|ADE55286.1| MotA/TolQ/ExbB proton channel [Coraliomargarita akajimensis DSM
45221]
Length = 194
Score = 71.4 bits (174), Expect = 9e-11, Method: Composition-based stats.
Identities = 35/200 (17%), Positives = 72/200 (36%), Gaps = 26/200 (13%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
I +++ G ++ L + +++ +S+ IQ + Q + L V
Sbjct: 5 IVNIWLSGGW----VMIPLALLALMIYSIGIQLLLFLRKGNVQLGR------ESEWLNWV 54
Query: 73 CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKL 132
K G E + + +++R + L ++ +L
Sbjct: 55 YNPDKAEGRAG----------EIIRYTQENVTQAKHVRNR----FEEVRQSILHDVQRRL 100
Query: 133 SFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV--SIPGIIESLISILLGLCVSI 190
FL ++ +A L+G+LG V+GM+ F ++ V GI E+LI+ GL +++
Sbjct: 101 IFLNTLVAAAPLMGLLGTVIGMLATFAGLSSSGGAETVDIVAAGISEALITTQTGLFIAL 160
Query: 191 PSSIAYNKFIEDSKKFAMQM 210
P +
Sbjct: 161 PGIFLTLVVRRRMHAVEAAL 180
>gi|172037967|ref|YP_001804468.1| putative biopolymer transport protein [Cyanothece sp. ATCC 51142]
gi|171699421|gb|ACB52402.1| putative biopolymer transport protein [Cyanothece sp. ATCC 51142]
Length = 217
Score = 71.4 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 40/204 (19%), Positives = 87/204 (42%), Gaps = 17/204 (8%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ---LFWSGQSLETVCKSLKNHHNI 82
+ L +FS+L ++II++ + + ++ + R+ + G LK + ++
Sbjct: 12 IVAWPLLVFSLLGVALIIERIIFWYRIKSRERKIITTVLKLYQGNEPIAAIAKLKQNADL 71
Query: 83 GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAG 142
+ IF+ A+ + + R+ ++ A EL + ++ +
Sbjct: 72 PMCRIFLEALV---------LQDATPTEFRL--ALETATQAELPLFKRFNTIFQTIIAVS 120
Query: 143 LLVGILGAVLGMMGFFQSI---AGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKF 199
L+G+LG +LG+M F S+ +N GI E+L S ++GL V+I + + N F
Sbjct: 121 PLLGLLGTILGLMRSFASLDIGNVSGTNATNVTGGISEALTSTVMGLVVAIMTLLFANSF 180
Query: 200 IEDSKKFAMQMEGFANEFSAILSR 223
+ ++ +A + + R
Sbjct: 181 RSLYLQQFALVQEYAGQLELLYRR 204
>gi|307720699|ref|YP_003891839.1| MotA/TolQ/ExbB proton channel [Sulfurimonas autotrophica DSM 16294]
gi|306978792|gb|ADN08827.1| MotA/TolQ/ExbB proton channel [Sulfurimonas autotrophica DSM 16294]
Length = 188
Score = 71.4 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 21/111 (18%), Positives = 49/111 (44%), Gaps = 3/111 (2%)
Query: 115 RMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG 174
++ + + +E T+ LS L +S +G+ G V+ ++ F I + G
Sbjct: 81 EVLGLGMLAATKEATKGLSVLSVFASTSPFIGLFGTVVSILDTFAHIGQNSGGMSIIAAG 140
Query: 175 IIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+ ++LI+ G+ V+ + + S + ++ ++ AIL+R+
Sbjct: 141 VSDALIATASGIFVATFAYTYHQILKRKSYEIISYLQMQSD---AILARKA 188
>gi|322515156|ref|ZP_08068159.1| TonB-system energizer ExbB [Actinobacillus ureae ATCC 25976]
gi|322118870|gb|EFX91060.1| TonB-system energizer ExbB [Actinobacillus ureae ATCC 25976]
Length = 147
Score = 71.4 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 19/105 (18%), Positives = 48/105 (45%), Gaps = 8/105 (7%)
Query: 109 IQDRI--DRMMDVAIARELEEIT----EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA 162
I +R+ + +DV ++++ L+ + ++ + +G+LG VLG++ F +
Sbjct: 31 IIERVLFYKQLDVTKYETIQDLEIDTTRNLTTISTIGANAPYIGLLGTVLGILLTFYHLG 90
Query: 163 GYYSNNVVS--IPGIIESLISILLGLCVSIPSSIAYNKFIEDSKK 205
+ + + +L + G+ V+IP+ + Y+ F +
Sbjct: 91 HSGGEIDAASIMVHLSLALKATAAGILVAIPAMMFYSGFNCKVDE 135
>gi|16329196|ref|NP_439924.1| biopolymer transport ExbB protein [Synechocystis sp. PCC 6803]
gi|3913623|sp|P72604|EXBL3_SYNY3 RecName: Full=Putative biopolymer transport protein exbB-like 3
gi|1651676|dbj|BAA16604.1| biopolymer transport ExbB protein [Synechocystis sp. PCC 6803]
Length = 210
Score = 71.4 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 40/183 (21%), Positives = 81/183 (44%), Gaps = 20/183 (10%)
Query: 26 CIITLLFIFSILSWSVIIQKSVN----FITLRRQFREFEQLFWSGQSLETVCKSLKNHHN 81
+ L FS+L+ ++II+++ + R + +L+ S LK + +
Sbjct: 5 IVAVPLLGFSLLAVALIIERAYFWSQIQLRQNRLVNDVLKLYRSNPP--GAIAKLKQNAD 62
Query: 82 IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSA 141
+ +A IF+ A+ + R+ ++ A EL + + ++ +
Sbjct: 63 LPMARIFLEALC---------LEGATPTEFRL--ALESATQAELPLLKRFNTLFQTIITV 111
Query: 142 GLLVGILGAVLGMMGFFQSIA---GYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNK 198
L+G+LG +LG+M F S++ +N GI E+L+S ++GL V+I + + N
Sbjct: 112 SPLLGLLGTILGLMRSFSSMSLGSTTAANASGVTGGISEALVSTVMGLVVAIATLLFANV 171
Query: 199 FIE 201
F
Sbjct: 172 FRS 174
>gi|296273386|ref|YP_003656017.1| tonB-system energizer ExbB [Arcobacter nitrofigilis DSM 7299]
gi|296097560|gb|ADG93510.1| tonB-system energizer ExbB [Arcobacter nitrofigilis DSM 7299]
Length = 142
Score = 71.0 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 22/88 (25%), Positives = 43/88 (48%)
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLC 187
IT+ LS +G+++S +G+LG VL +M F +++ + + +L + +GL
Sbjct: 54 ITKHLSIIGTIASNAPYIGLLGTVLAIMLTFMTMSEGDIEATKIMSSLALALKATAVGLV 113
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFAN 215
V+I S I YN ++ + +
Sbjct: 114 VAILSQIFYNVLARYAEVIESKFDEITE 141
>gi|282899708|ref|ZP_06307672.1| MotA/TolQ/ExbB proton channel [Cylindrospermopsis raciborskii
CS-505]
gi|281195587|gb|EFA70520.1| MotA/TolQ/ExbB proton channel [Cylindrospermopsis raciborskii
CS-505]
Length = 217
Score = 71.0 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 40/222 (18%), Positives = 91/222 (40%), Gaps = 21/222 (9%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ---LFWSGQ 67
+ I LF+ G+ ++ L + SI++ +II++ + + R+ + +
Sbjct: 1 MDIKQLFIAGGV----VMWPLLLSSIIAVGLIIERIWFWSKITRRQERVVKYVLNLYRQN 56
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+L L+ + ++ +A IF++A + ++ E+
Sbjct: 57 NLVNAIDVLQKNADLPIARIFLTA-----------LELEEPNPEEFRLALETEAQAEIPL 105
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGY---YSNNVVSIPGIIESLISILL 184
+ + ++ + L+G+LG VLG++ F S+ S GI E+L+S
Sbjct: 106 LKRFTTVFDTIIALAPLLGLLGTVLGLINSFASLNLGNVGGSQTAGVTGGISEALVSTAT 165
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
GL V+I + + N F ++ ++ + + + R+ E
Sbjct: 166 GLIVAISTLLFANSFRGLYQRQIALIQEYGGQLELLYRRRYE 207
>gi|254425275|ref|ZP_05038993.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Synechococcus sp. PCC 7335]
gi|196192764|gb|EDX87728.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Synechococcus sp. PCC 7335]
Length = 206
Score = 71.0 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 39/200 (19%), Positives = 91/200 (45%), Gaps = 20/200 (10%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQ----FREFEQLFWSGQSLETVCKSLKNHHNIG 83
+ L +FS+ + +V +++S+ + +++Q ++ QL+ + V LK + N+
Sbjct: 1 MWPLLVFSLCAIAVTVERSLFWYRIKKQERKIVKDVLQLYRANPP--AVFSRLKQNINLP 58
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
++ IF+ A+ Q R+ ++ A EL + + ++ +
Sbjct: 59 ISRIFLEALE---------LEGASPNQFRL--ALESATQAELPLLKRFNTVFETIVAVAP 107
Query: 144 LVGILGAVLGMMGFFQSI---AGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFI 200
L+G+LG +LG++ F S+ +N + GI E+L+S G+ V+I + + N F
Sbjct: 108 LLGLLGTILGLIRSFSSLNLGGLSGANTGLVTGGISEALVSTAAGMIVAIFTLLFANLFR 167
Query: 201 EDSKKFAMQMEGFANEFSAI 220
++ ++ + + +
Sbjct: 168 GFYRRQIALLQEYGGQLEIL 187
>gi|323494336|ref|ZP_08099448.1| ExbB-like protein [Vibrio brasiliensis LMG 20546]
gi|323311499|gb|EGA64651.1| ExbB-like protein [Vibrio brasiliensis LMG 20546]
Length = 231
Score = 71.0 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 31/194 (15%), Positives = 72/194 (37%), Gaps = 26/194 (13%)
Query: 29 TLLFIFSILSWSVIIQKSVN----FITLRRQFREFEQLFW--SGQSLETVCKSLKNHHNI 82
L I S L+ +I+++ +R R + + Q + + ++L +
Sbjct: 16 WPLVICSGLTLMIIVERVFQVIISLGVGKRAIRAELEKIHPDNTQQIAALAEALAPRRPL 75
Query: 83 ---GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMS 139
G+A + A + K+ + A + + ++ L L +
Sbjct: 76 LYKGVAMLL--AHHTFAKTLREDAAGMW-------------LQEKRHQLNSGLRLLSLIG 120
Query: 140 SAGLLVGILGAVLGMMGFFQSIAGYYSNNV--VSIPGIIESLISILLGLCVSIPSSIAYN 197
L+G+LG VLG++ F+ +A N G+ ++ + GL +++P+
Sbjct: 121 VITPLIGLLGTVLGLIEMFKGVAASSGNITPNDLADGLGIAMRTTAAGLIIALPAIAGAQ 180
Query: 198 KFIEDSKKFAMQME 211
+ + ++E
Sbjct: 181 LLGLWADRVMAKLE 194
>gi|153834538|ref|ZP_01987205.1| biopolymer transport protein [Vibrio harveyi HY01]
gi|156976470|ref|YP_001447376.1| biopolymer transport protein [Vibrio harveyi ATCC BAA-1116]
gi|148869057|gb|EDL68098.1| biopolymer transport protein [Vibrio harveyi HY01]
gi|156528064|gb|ABU73149.1| hypothetical protein VIBHAR_05243 [Vibrio harveyi ATCC BAA-1116]
Length = 232
Score = 71.0 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 32/192 (16%), Positives = 68/192 (35%), Gaps = 22/192 (11%)
Query: 29 TLLFIFSILSWSVIIQKSVN----FITLRRQFREFEQLF--WSGQSLETVCKSLKNHHNI 82
L I S L+ +I ++ +R R+ + + +E + L +
Sbjct: 16 WPLMICSALTVMIIAERLFQVFISLGVGKRAIRQKLTNLDPTNNKDIEALADELSGKRPL 75
Query: 83 GLAAIFMS-AMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSA 141
+ M A + KS + A + + ++ L L +
Sbjct: 76 LYRGVAMLLAHHSFSKSLREDAAGIW-------------LQEKRHQLHSGLRLLTLIGVI 122
Query: 142 GLLVGILGAVLGMMGFFQSIAGYYSNNV--VSIPGIIESLISILLGLCVSIPSSIAYNKF 199
L+G+LG VLG++ F+ IA N G+ ++ + GL +++P+
Sbjct: 123 SPLIGLLGTVLGLIDMFKGIASSTGNITPNDLADGLGLAMRTTAAGLIIALPAISGAQLI 182
Query: 200 IEDSKKFAMQME 211
+ + ++E
Sbjct: 183 GLWADRVIAKLE 194
>gi|118474747|ref|YP_892657.1| ExbB\TolQ family transport protein [Campylobacter fetus subsp.
fetus 82-40]
gi|118413973|gb|ABK82393.1| ExbB\tolQ family transport protein [Campylobacter fetus subsp.
fetus 82-40]
Length = 199
Score = 71.0 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 41/222 (18%), Positives = 87/222 (39%), Gaps = 42/222 (18%)
Query: 6 LAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS 65
L +D+ + + L +++ L ++ ++S++++ + + W
Sbjct: 2 LGFLDL-LLNYLSKSSLVTIIVLSWLSLYFVISFTILFSRYIGLNN------------W- 47
Query: 66 GQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
+ L +I M S+ S K S +++ +DV I+
Sbjct: 48 -----------IKKEQVALESILMGTKSDLVDSSLKKCASGRITKEK----LDVCISLAE 92
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQ--SIAGYYSNNVVSIPGIIESLISIL 183
T L+ L ++S +G+ G V+ ++ F G S+ V P I E+L++
Sbjct: 93 ANATSGLTMLSIIASTSPFIGLFGTVISILETFAGLGQGGGSSSLSVIAPAISEALVATG 152
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
G+ V+IP+ ++N I+ A E +I+ R+
Sbjct: 153 CGIFVAIPAY-SFNLLIKRK----------AYEIISIIRREA 183
>gi|291276527|ref|YP_003516299.1| ExbB/TolQ family transport protein [Helicobacter mustelae 12198]
gi|290963721|emb|CBG39555.1| putative exbB/tolQ family transport protein [Helicobacter mustelae
12198]
Length = 142
Score = 71.0 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 45/92 (48%), Gaps = 1/92 (1%)
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV-SIPGIIESLISILL 184
E +T+ ++ L + S +G+LG V G++ F ++ + + + +L + +
Sbjct: 50 ESLTKNMTALYIIYSNAPYIGLLGTVGGIIITFYGMSQGSDIDAKRIMRDLSLALQATGV 109
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANE 216
GLCV+IP + YN + + + + + NE
Sbjct: 110 GLCVAIPVLMIYNALLRKIEIISNRYKAMKNE 141
>gi|28900280|ref|NP_799935.1| ExbB-like protein [Vibrio parahaemolyticus RIMD 2210633]
gi|260364369|ref|ZP_05777017.1| biopolymer transport protein [Vibrio parahaemolyticus K5030]
gi|260880848|ref|ZP_05893203.1| biopolymer transport protein [Vibrio parahaemolyticus AN-5034]
gi|260895991|ref|ZP_05904487.1| biopolymer transport protein [Vibrio parahaemolyticus Peru-466]
gi|28808591|dbj|BAC61768.1| ExbB-like protein [Vibrio parahaemolyticus RIMD 2210633]
gi|308087043|gb|EFO36738.1| biopolymer transport protein [Vibrio parahaemolyticus Peru-466]
gi|308091553|gb|EFO41248.1| biopolymer transport protein [Vibrio parahaemolyticus AN-5034]
gi|308113690|gb|EFO51230.1| biopolymer transport protein [Vibrio parahaemolyticus K5030]
Length = 230
Score = 71.0 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 31/192 (16%), Positives = 67/192 (34%), Gaps = 22/192 (11%)
Query: 29 TLLFIFSILSWSVIIQKSVN----FITLRRQFREFEQLF--WSGQSLETVCKSLKNHHNI 82
L I S L+ +I ++ + R+ + + +E + L +
Sbjct: 16 WPLIICSALTVMIIAERLFQVFISLGVGKSAIRQHLASLDPTNSRDIEALADELSGKRPL 75
Query: 83 GLAAIFMS-AMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSA 141
+ M A + KS + A + + ++ L L +
Sbjct: 76 LYRGVAMLLAHHSFAKSLREDAAGMW-------------LQEKRHQLHSGLRLLTLIGVI 122
Query: 142 GLLVGILGAVLGMMGFFQSIAGYYSNNV--VSIPGIIESLISILLGLCVSIPSSIAYNKF 199
L+G+LG VLG++ F+ IA N G+ ++ + GL +++P+
Sbjct: 123 SPLIGLLGTVLGLIEMFKGIAVSTGNITPNDLADGLGLAMRTTAAGLIIALPAISGAQII 182
Query: 200 IEDSKKFAMQME 211
+ + ++E
Sbjct: 183 GLWADRVLAKLE 194
>gi|153838943|ref|ZP_01991610.1| biopolymer transport protein [Vibrio parahaemolyticus AQ3810]
gi|149747577|gb|EDM58507.1| biopolymer transport protein [Vibrio parahaemolyticus AQ3810]
Length = 213
Score = 70.6 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 31/192 (16%), Positives = 67/192 (34%), Gaps = 22/192 (11%)
Query: 29 TLLFIFSILSWSVIIQKSVN----FITLRRQFREFEQLF--WSGQSLETVCKSLKNHHNI 82
L I S L+ +I ++ + R+ + + +E + L +
Sbjct: 16 WPLIICSALTVMIIAERLFQVFISLGVGKSAIRQHLASLDPTNSRDIEALADELSGKRPL 75
Query: 83 GLAAIFMS-AMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSA 141
+ M A + KS + A + + ++ L L +
Sbjct: 76 LYRGVAMLLAHHSFAKSLREDAAGMW-------------LQEKRHQLHSGLRLLTLIGVI 122
Query: 142 GLLVGILGAVLGMMGFFQSIAGYYSNNV--VSIPGIIESLISILLGLCVSIPSSIAYNKF 199
L+G+LG VLG++ F+ IA N G+ ++ + GL +++P+
Sbjct: 123 SPLIGLLGTVLGLIEMFKGIAVSTGNITPNDLADGLGLAMRTTAAGLIIALPAISGAQII 182
Query: 200 IEDSKKFAMQME 211
+ + ++E
Sbjct: 183 GLWADRVLAKLE 194
>gi|86135944|ref|ZP_01054523.1| MotA/TolQ/ExbB proton channel family protein [Roseobacter sp.
MED193]
gi|85826818|gb|EAQ47014.1| MotA/TolQ/ExbB proton channel family protein [Roseobacter sp.
MED193]
Length = 220
Score = 70.6 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 32/172 (18%), Positives = 65/172 (37%), Gaps = 21/172 (12%)
Query: 40 SVIIQKSVNFITLR----RQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEW 95
++++ K + R RQ W K+L + + M+
Sbjct: 31 ALVLYKMWQYQAARVGRHRQLATAVAA-WDLGDQAGAQKALAESRSYLSPVLAMA----- 84
Query: 96 KKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMM 155
A + R+D + A ++ L L ++ L+G+ G V+GM+
Sbjct: 85 -----LSAPQTAELSARVDAEAETRFA----QLERGLGALDMVAQLAPLMGLFGTVIGMI 135
Query: 156 GFFQSI--AGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKK 205
FQ + AG + + GI +L++ GL V++P+S+ + ++
Sbjct: 136 EAFQKLQSAGSSVDPSLLAGGIWVALLTTAAGLAVAMPTSLVLSWLTARMQR 187
>gi|163750977|ref|ZP_02158209.1| hypothetical protein KT99_07558 [Shewanella benthica KT99]
gi|161329267|gb|EDQ00265.1| hypothetical protein KT99_07558 [Shewanella benthica KT99]
Length = 464
Score = 70.6 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 31/205 (15%), Positives = 87/205 (42%), Gaps = 18/205 (8%)
Query: 20 MGLAVKC--IITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLK 77
+ ++ + I + L ++ + ++V +W + L T+ +
Sbjct: 263 ADWVKRGGEVLWPILILAALGVTIALWRAVVLF------------YW--RPLTTLTEGDA 308
Query: 78 NHHNIGL-AAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLG 136
N ++ L + ++ + + +D+ + + +++ + L F+
Sbjct: 309 NKSDLPLIKQQLLQSIRVPAAVVLANSIVAGASVEAMDQRLKQLMLQQMMKFEFGLGFIA 368
Query: 137 SMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISILLGLCVSIPSSIA 195
+++ ++G+LG V GM+ FQS+ + +++ + GI ++LI+ GL V++P +
Sbjct: 369 LLAAMAPMLGLLGTVSGMIETFQSLTEFGNSDPKLLSQGISKALITTQAGLLVALPLLLL 428
Query: 196 YNKFIEDSKKFAMQMEGFANEFSAI 220
+ ++ ++ ME + A+
Sbjct: 429 HYPLKRRAQSLSLNMEQQSALLLAL 453
>gi|301165630|emb|CBW25201.1| putative transport related membrane protein [Bacteriovorax marinus
SJ]
Length = 219
Score = 70.6 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 22/158 (13%), Positives = 66/158 (41%), Gaps = 2/158 (1%)
Query: 66 GQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
+ + + + ++ G + +++ K G + ++ +D +
Sbjct: 54 ASFMNELQRYILSNDIQGAIRVCSGSVAALPKVLKSGLKRSNQSTAQMQNAIDATALEVI 113
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGY--YSNNVVSIPGIIESLISIL 183
++ +L++L +++ L G+LG + G++ F ++ + GI +++ +
Sbjct: 114 PKVELRLNYLQLIANISTLFGLLGTIQGLIETFTAVGSADPAQKQELLALGISKAMNTTF 173
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
LGL +I + + S+K +++ F+ + +L
Sbjct: 174 LGLLAAISVMMLHAFLASKSEKIINEIDEFSVKLLDLL 211
>gi|325107032|ref|YP_004268100.1| MotA/TolQ/ExbB proton channel [Planctomyces brasiliensis DSM 5305]
gi|324967300|gb|ADY58078.1| MotA/TolQ/ExbB proton channel [Planctomyces brasiliensis DSM 5305]
Length = 217
Score = 70.6 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 26/137 (18%), Positives = 53/137 (38%), Gaps = 12/137 (8%)
Query: 95 WKKSCDKGARSPIGIQDRIDRMMDVAIARELEE-----ITEKLSFLGSMSSAGLLVGILG 149
W ++ + + DR + ++ + E + +++ ++ + ++G+LG
Sbjct: 77 WSRAVPQMVLVALEQLDRPPSKLRQYLSEKFERDVLADLEYASAWINTIVKSAPMLGLLG 136
Query: 150 AVLGMMGFFQSIA---GYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKF 206
V GM+ F IA + I +L + LGL V+IP IA +
Sbjct: 137 TVSGMIQAFAKIADTQKTGGDPSALAGEISFALFTTALGLAVAIPLVIAGAYLQVRMGRL 196
Query: 207 ----AMQMEGFANEFSA 219
++ F +E A
Sbjct: 197 QDHVQAELSWFLDELDA 213
>gi|119469532|ref|ZP_01612436.1| MotA/TolQ/ExbB proton channel family protein [Alteromonadales
bacterium TW-7]
gi|119447067|gb|EAW28337.1| MotA/TolQ/ExbB proton channel family protein [Alteromonadales
bacterium TW-7]
Length = 454
Score = 70.6 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 25/110 (22%), Positives = 56/110 (50%), Gaps = 1/110 (0%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ ++ +D AI RE + ++ + +++ L+G+LG V+GM+ FQ+I + + +
Sbjct: 337 ENLELKLDEAILRETPRVEAGINIIKILAAIAPLLGLLGTVIGMILTFQTITLFGTGDPK 396
Query: 171 SIPG-IIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
+ G I +L++ LGL ++P + ++ SK ++ + A
Sbjct: 397 IMAGNISLALVTTALGLIAALPLILLHSIVAGRSKSVLHILDEQSAGIIA 446
>gi|332290364|ref|YP_004421216.1| colicin uptake protein TolQ [Gallibacterium anatis UMN179]
gi|330433260|gb|AEC18319.1| colicin uptake protein TolQ [Gallibacterium anatis UMN179]
Length = 149
Score = 70.6 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 20/91 (21%), Positives = 42/91 (46%), Gaps = 2/91 (2%)
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYS--NNVVSIPGIIESLISILLG 185
+T L+ + S+ + VG+LG V+G++ F + + + + +L + +G
Sbjct: 56 LTRHLTIISSIGANAPYVGLLGTVIGILLTFYQLGQSGGDIDASAIMLHLSLALKATAVG 115
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANE 216
+ V+IPS + YN + +Q + E
Sbjct: 116 ILVAIPSMMFYNGLGRKVEVKRLQWKSLQAE 146
>gi|119494031|ref|ZP_01624587.1| MotA/TolQ/ExbB proton channel [Lyngbya sp. PCC 8106]
gi|119452224|gb|EAW33424.1| MotA/TolQ/ExbB proton channel [Lyngbya sp. PCC 8106]
Length = 278
Score = 70.6 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 55/226 (24%), Positives = 89/226 (39%), Gaps = 34/226 (15%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL- 69
+ I +F + G A + L + SILS S II++ FW G +L
Sbjct: 1 MDIVEIFAKGGPA----MWPLAVLSILSVSTIIERLW---------------FW-GTTLT 40
Query: 70 --ETVCKSLKNHHNIGLAAIFMSAMSEW-KKSCDKGARSPIGIQ----DRIDRMMDVAIA 122
+ + + + G I E + + SP+ + + ++ A
Sbjct: 41 REQQIVNRVVDAARRGQWGIAYQVTREASSRPVGRFLYSPLRLTNPDPELFRLALEAAAD 100
Query: 123 RELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI----AGYYSNNVVSIPGIIES 178
EL + L ++ + ++G+LG VLG++ SI G S + V++ GI E+
Sbjct: 101 DELASMRRGDKILEAVIALSPMLGLLGTVLGLINSLGSIRLGDIGTSSASDVTL-GIGEA 159
Query: 179 LISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
LIS GL V+I S Y F S NE +L RQ
Sbjct: 160 LISTATGLIVAIISLTFYRLFQALSFSQIKVFRKVGNEL-ELLYRQ 204
>gi|158339815|ref|YP_001520822.1| MotA/TolQ/ExbB proton channel family protein [Acaryochloris marina
MBIC11017]
gi|158310056|gb|ABW31672.1| MotA/TolQ/ExbB proton channel family protein [Acaryochloris marina
MBIC11017]
Length = 217
Score = 70.6 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 38/199 (19%), Positives = 82/199 (41%), Gaps = 19/199 (9%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQ----FREFEQLFWSGQSLETVCKSLKNHHN 81
++ L +FS++ +++I++ + + L R R +L+ ++ L+
Sbjct: 12 VVMLPLMVFSLIVIALVIERLIFWSKLNRNQLPIVRRVFKLYRQ-DNVYEALGYLQEQAK 70
Query: 82 IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSA 141
+A IF++A++ + ++ EL + + ++ S
Sbjct: 71 FPIARIFLAALA-----------LENPTPEEFRLALESEAQAELPTLRRFSTMFDTVISI 119
Query: 142 GLLVGILGAVLGMMGFFQSIAGY---YSNNVVSIPGIIESLISILLGLCVSIPSSIAYNK 198
L+G+LG VLG++ F S+ S + GI +LIS GL V+I + I N
Sbjct: 120 APLLGLLGTVLGLINSFSSLDMGNIGGSESAGVTGGISTALISTAAGLIVAISTLIFANM 179
Query: 199 FIEDSKKFAMQMEGFANEF 217
F ++ ++ + +
Sbjct: 180 FRSLYQRQLAFIQEYGGQL 198
>gi|33151564|ref|NP_872917.1| biopolymer transport protein [Haemophilus ducreyi 35000HP]
gi|3913615|sp|O51808|EXBB_HAEDU RecName: Full=Biopolymer transport protein exbB
gi|2843112|gb|AAC01945.1| ExbB [Haemophilus ducreyi]
gi|33147784|gb|AAP95306.1| biopolymer transport protein [Haemophilus ducreyi 35000HP]
Length = 150
Score = 70.2 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 17/80 (21%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVS--IPGIIESLISILLG 185
+T L+ + ++ + VG+LG VLG++ F + + + + +L + G
Sbjct: 56 LTRNLTTISTIGANAPYVGLLGTVLGILLTFYHLGHSGGEIDAASIMVHLSLALKATAAG 115
Query: 186 LCVSIPSSIAYNKFIEDSKK 205
+ V+IP+ + Y+ F ++
Sbjct: 116 ILVAIPAMMFYSGFNRKVEE 135
>gi|163800276|ref|ZP_02194177.1| ExbB-like protein [Vibrio sp. AND4]
gi|159175719|gb|EDP60513.1| ExbB-like protein [Vibrio sp. AND4]
Length = 232
Score = 70.2 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 32/194 (16%), Positives = 72/194 (37%), Gaps = 26/194 (13%)
Query: 29 TLLFIFSILSWSVIIQK----SVNFITLRRQFREFEQLF--WSGQSLETVCKSLKNHHNI 82
L I S L+ +I ++ ++ + R+ + + +E + L + +
Sbjct: 16 WPLIICSALTVMIIAERLFHVFISLGVGKHAIRQKLTNLDPTNNKDIEALADELSDKRPL 75
Query: 83 ---GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMS 139
G+A + A + KS + A + + ++ L L +
Sbjct: 76 LYRGVAMLL--AHHSFSKSLREDAAGIW-------------LQEKRHQLHSGLRLLTLIG 120
Query: 140 SAGLLVGILGAVLGMMGFFQSIAGYYSNNV--VSIPGIIESLISILLGLCVSIPSSIAYN 197
L+G+LG VLG++ F+ IA N G+ ++ + GL +++P+
Sbjct: 121 VISPLIGLLGTVLGLIDMFKGIASSTGNITPNDLADGLGLAMRTTAAGLIIALPAISGAQ 180
Query: 198 KFIEDSKKFAMQME 211
+ + ++E
Sbjct: 181 LIGLWADRVIAKLE 194
>gi|254229077|ref|ZP_04922497.1| transporter, MotA/TolQ/ExbB proton channel family protein [Vibrio
sp. Ex25]
gi|262396649|ref|YP_003288502.1| ferric siderophore transport system biopolymer transport protein
ExbB [Vibrio sp. Ex25]
gi|151938368|gb|EDN57206.1| transporter, MotA/TolQ/ExbB proton channel family protein [Vibrio
sp. Ex25]
gi|262340243|gb|ACY54037.1| ferric siderophore transport system biopolymer transport protein
ExbB [Vibrio sp. Ex25]
Length = 232
Score = 70.2 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 35/192 (18%), Positives = 72/192 (37%), Gaps = 22/192 (11%)
Query: 29 TLLFIFSILSWSVIIQKSV----NFITLRRQFREFEQLF--WSGQSLETVCKSLKNHHNI 82
L I S L+ +I ++ + +R R+ +G LET+ + L + +
Sbjct: 16 WPLIICSALTVMIITERLFHVLISLGVGKRAIRQKLIGLDPTNGNDLETLAEELSHKRPL 75
Query: 83 GLAAIFMS-AMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSA 141
+ M A + KS + A + + ++ L L +
Sbjct: 76 LYRGVAMLLAHHSFSKSLREDAAGIW-------------LQEKRHQLHSGLRLLTLIGVI 122
Query: 142 GLLVGILGAVLGMMGFFQSIAGYYSNNV--VSIPGIIESLISILLGLCVSIPSSIAYNKF 199
L+G+LG VLG++ F+ IA N G+ ++ + GL +++P+
Sbjct: 123 SPLIGLLGTVLGLIEMFKGIAVSTGNITPNDLADGLGLAMRTTAAGLIIALPAISGAQII 182
Query: 200 IEDSKKFAMQME 211
+ + ++E
Sbjct: 183 GLWADRVIAKLE 194
>gi|189219778|ref|YP_001940419.1| biopolymer transport protein [Methylacidiphilum infernorum V4]
gi|189186636|gb|ACD83821.1| Biopolymer transport protein [Methylacidiphilum infernorum V4]
Length = 214
Score = 70.2 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 39/205 (19%), Positives = 89/205 (43%), Gaps = 23/205 (11%)
Query: 27 IITLLFIFSILSWSVIIQKSVNFITLR--RQFREFEQLFWSGQ--SLETVCKSLKNHHNI 82
++ + I +++ + +++K + ++ + R + +++F + E ++
Sbjct: 11 VMWPILILGVVTVAALLEKVIFLVSEQSVRNPKLIQKIFELAEKGRYEEAI-AIGEKSKY 69
Query: 83 GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAG 142
+A + + + + + + + A + ++E + L L + + G
Sbjct: 70 NVAQVVVEGLR------HRNSMPVDAMIE--------AASGQIERYSRGLVILDTAVTLG 115
Query: 143 LLVGILGAVLGMMGFFQSIAGYYSNNVVSIP---GIIESLISILLGLCVSIPSSIAYNKF 199
L+G+LG V GMM F SI G G+ ESLI++ GL ++I + I N F
Sbjct: 116 PLLGLLGTVTGMMHAF-SIVGTGEIAGKQAAITGGVAESLIAVSFGLAIAILAIIPLNFF 174
Query: 200 IEDSKKFAMQMEGFANEFSAILSRQ 224
++K ++EG+ IL ++
Sbjct: 175 NARTEKVRRELEGYCTRLEMILKKK 199
>gi|32476572|ref|NP_869566.1| TolQ [Rhodopirellula baltica SH 1]
gi|32447118|emb|CAD76944.1| probable TolQ [Rhodopirellula baltica SH 1]
gi|327543324|gb|EGF29756.1| MotA/TolQ/ExbB proton channel [Rhodopirellula baltica WH47]
Length = 235
Score = 70.2 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 34/186 (18%), Positives = 75/186 (40%), Gaps = 13/186 (6%)
Query: 31 LFIFSILSWSV--IIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIF 88
L + ++ W + I+ R + E + F ++ V + L+ G+
Sbjct: 18 LALAAVALWGLYQIVIVWTRVGQKRFKTEEQQDAF-----MDDVEQMLRAGDYEGVHEYC 72
Query: 89 MSAMSEWKKSCDKGARS-PIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGI 147
+ + D + G + MMD + ++ +LS++ ++ + ++G+
Sbjct: 73 DGDVRAIPQMIDMAVVNRDEGFKRAKQIMMDRFQRDVMSDLEYRLSWVSTVIKSAPMIGL 132
Query: 148 LGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIPSSIAYNKFIEDSKKF 206
G V GMMG F+++A ++ G I +L++ GL ++IP + +
Sbjct: 133 FGTVFGMMGAFKTLATAEQVEPSALAGDIQVALVTTASGLAIAIPLML----LVATVMIR 188
Query: 207 AMQMEG 212
+ME
Sbjct: 189 IAKMED 194
>gi|84385283|ref|ZP_00988315.1| ExbB-like protein [Vibrio splendidus 12B01]
gi|84379880|gb|EAP96731.1| ExbB-like protein [Vibrio splendidus 12B01]
Length = 233
Score = 69.8 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 30/191 (15%), Positives = 69/191 (36%), Gaps = 20/191 (10%)
Query: 29 TLLFIFSILSWSVIIQKSVNFITL----RRQFREFEQLFW--SGQSLETVCKSLKNHHNI 82
L I S L+ +I ++ + +R R + + +E + +S+
Sbjct: 16 WPLLICSALTAMIIAERVFQVMLSIGVGKRAIRRELNQISPTNSKEIEALAQSISGKRP- 74
Query: 83 GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAG 142
+ +S + S +D + + ++ L LG +
Sbjct: 75 ----LLYKGVS---MLLAHHSFSKGLREDAAGIWLQ----EKRHQLHAGLRLLGLIGVIS 123
Query: 143 LLVGILGAVLGMMGFFQSIAGYYSNNV--VSIPGIIESLISILLGLCVSIPSSIAYNKFI 200
L+G+LG VLG++ F+ +A + G+ ++ + GL +++P+
Sbjct: 124 PLIGLLGTVLGLIEMFKGVAATTGSITPNDLADGLGLAMRTTAAGLMIALPAISGSQLLG 183
Query: 201 EDSKKFAMQME 211
+ + Q+E
Sbjct: 184 LWADRVLAQLE 194
>gi|262195041|ref|YP_003266250.1| MotA/TolQ/ExbB proton channel [Haliangium ochraceum DSM 14365]
gi|262078388|gb|ACY14357.1| MotA/TolQ/ExbB proton channel [Haliangium ochraceum DSM 14365]
Length = 216
Score = 69.8 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 32/214 (14%), Positives = 85/214 (39%), Gaps = 29/214 (13%)
Query: 14 FALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS---GQSLE 70
F ++ + V I + ++ ++++V + L S +++
Sbjct: 16 FGMW---PILVSLIFII---------AITVERAVFLFKASVDKDKLLALLKSQVMNGNVQ 63
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
+ ++ + I + +S++ +S + MD + REL ++
Sbjct: 64 GAVQVCSSNP-TPITRIVQAGLSKFNRSDAD-----------VQAAMDESALRELPKVNA 111
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV--SIPGIIESLISILLGLCV 188
+ +L +S+ ++ G+ G ++GM+ F + AG +++ GI E+L G+ V
Sbjct: 112 RTPYLAMLSNFAVMAGLFGTIVGMIKSFGAAAGADASSKAAELANGISEALNCTGFGILV 171
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
S+ +A++ + K + + +++
Sbjct: 172 SLVGLLAFSLLTGKTTKVTDDINEVTVQVVNLVT 205
>gi|302338258|ref|YP_003803464.1| MotA/TolQ/ExbB proton channel [Spirochaeta smaragdinae DSM 11293]
gi|301635443|gb|ADK80870.1| MotA/TolQ/ExbB proton channel [Spirochaeta smaragdinae DSM 11293]
Length = 242
Score = 69.8 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 37/222 (16%), Positives = 82/222 (36%), Gaps = 17/222 (7%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
IS+ + + G+ ++ ++ +VI +++V F+ + SG LE
Sbjct: 10 ISMLSFINRGGVIN----WIIIAMYVVVLAVIAERAVYFLRTSYR----RTTLLSG--LE 59
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSC-----DKGARSPIGIQDRIDRMMDVAIAREL 125
+ ++ + + + +S + + + +++ A
Sbjct: 60 QYIRVIEKQAPEDESEEGLPWPRSYSRSQPLRMIRRFMENRRSSTAILRELLEREGAILQ 119
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI-AGYYSNNVVS-IPGIIESLISIL 183
E+ + +L + + L G+ G V G+M F+ I A S ++ + GI ++I+
Sbjct: 120 REMDHGVEWLSVVGNLAPLCGLFGTVTGLMSAFRQIEATGGSADISTFAGGIWAAMITTA 179
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
GL +IP+ A F + M + S L
Sbjct: 180 FGLAAAIPALAACRFFERHADARQRDMAYVVSLLSESLREDL 221
>gi|85712662|ref|ZP_01043708.1| TonB system biopolymer transport component [Idiomarina baltica
OS145]
gi|85693512|gb|EAQ31464.1| TonB system biopolymer transport component [Idiomarina baltica
OS145]
Length = 174
Score = 69.8 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 26/200 (13%), Positives = 65/200 (32%), Gaps = 43/200 (21%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLET 71
SI G + ++ +LF+ W ++I++ + + R+ W +
Sbjct: 10 SIRDFIATGGDVLYVVMGVLFLM----WVLMIERYWYLTSAFPKLRKDIIARWDAR---- 61
Query: 72 VCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEK 131
R+ + I+ +++ +
Sbjct: 62 ----------------------------------KDTTSWYAHRIREAWISEANDKLNAR 87
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSI 190
+ + + + LVG+LG V GM+ F+ +A + N + GI + I + G+ ++
Sbjct: 88 ILLIKTCVALCPLVGLLGTVTGMITVFEIMAVQGTGNPRLMASGISMATIPTMAGMVAAL 147
Query: 191 PSSIAYNKFIEDSKKFAMQM 210
+ ++ +
Sbjct: 148 SGMFFATRLESRVRRAKQNL 167
>gi|283780490|ref|YP_003371245.1| MotA/TolQ/ExbB proton channel [Pirellula staleyi DSM 6068]
gi|283438943|gb|ADB17385.1| MotA/TolQ/ExbB proton channel [Pirellula staleyi DSM 6068]
Length = 215
Score = 69.8 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 35/208 (16%), Positives = 82/208 (39%), Gaps = 11/208 (5%)
Query: 21 GLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHH 80
+ L I ++ I+ + R + + ++ F L ++ L+
Sbjct: 9 DFISNTVYGALAIDALWGAYCIVVVYMRIGQNRFKSEKKQEEF-----LASLEAPLEKKD 63
Query: 81 NIGLAAIFMSAMSEWKKSCDKG-ARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMS 139
AA+ + +R +G+ + ++D L ++ ++S++ ++
Sbjct: 64 FESAAALCDGDRRALPQLALLAISRRNLGLAKVQELVVDRFQRDVLGDLDHRISWINNVI 123
Query: 140 SAGLLVGILGAVLGMMGFFQSIAGYYSN-NVVSIPGIIESLISILLGLCVSIPSSIAYNK 198
++G+LG VLGMM F +A + I +LI+ +GL ++IP++I
Sbjct: 124 KTAPMLGLLGTVLGMMAAFGKLASEANVKPDQLASDISFALITTAIGLAIAIPATICVAS 183
Query: 199 FIEDSKKFA----MQMEGFANEFSAILS 222
+K + F + F++ ++
Sbjct: 184 INVRIRKMEDMVFAGLNDFLDRFASAVT 211
>gi|282896622|ref|ZP_06304637.1| MotA/TolQ/ExbB proton channel [Raphidiopsis brookii D9]
gi|281198492|gb|EFA73378.1| MotA/TolQ/ExbB proton channel [Raphidiopsis brookii D9]
Length = 217
Score = 69.4 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 38/222 (17%), Positives = 93/222 (41%), Gaps = 21/222 (9%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ---LFWSGQ 67
+ I LF+ G+ ++ L + SI++ +II++ + + ++ + + +
Sbjct: 1 MDIKQLFIAGGV----VMWPLLLSSIIAVGLIIERIWFWSKITKREEKVVKYVLNLYRQN 56
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+L + L+ + ++ +A IF++A + ++ E+
Sbjct: 57 NLVNIVDILQRNADLPIARIFLTA-----------LELEEPNPEEFRLALETEAQAEIPL 105
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGY---YSNNVVSIPGIIESLISILL 184
+ + ++ + L+G+LG VLG++ F S+ + GI E+L+S
Sbjct: 106 LKRFTTVFDTIIALAPLLGLLGTVLGLINSFASLNIGNVGGTQTAGVTGGISEALVSTAT 165
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
GL V+I + + N F ++ ++ + + + R+ E
Sbjct: 166 GLIVAIFTLLFANSFRGLYQRQIALIQEYGGQLELLYRRRYE 207
>gi|260903141|ref|ZP_05911536.1| biopolymer transport protein [Vibrio parahaemolyticus AQ4037]
gi|308107793|gb|EFO45333.1| biopolymer transport protein [Vibrio parahaemolyticus AQ4037]
Length = 232
Score = 69.4 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 31/192 (16%), Positives = 67/192 (34%), Gaps = 22/192 (11%)
Query: 29 TLLFIFSILSWSVIIQKSVN----FITLRRQFREFEQLF--WSGQSLETVCKSLKNHHNI 82
L I S L+ +I ++ + R+ + + +E + L +
Sbjct: 16 WPLIICSALTVMIIAERLFQVFISLGVGKSAIRQHLASLDPTNSRDIEALADELSGKRPL 75
Query: 83 GLAAIFMS-AMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSA 141
+ M A + KS + A + + ++ L L +
Sbjct: 76 LYRGVAMLLAHHSFAKSLREDAAGMW-------------LQEKRHQLHSGLRLLTLIGVI 122
Query: 142 GLLVGILGAVLGMMGFFQSIAGYYSNNV--VSIPGIIESLISILLGLCVSIPSSIAYNKF 199
L+G+LG VLG++ F+ IA N G+ ++ + GL +++P+
Sbjct: 123 SPLIGLLGTVLGLIEMFKGIAVSTGNITPNDLADGLGLAMRTTAAGLIIALPAISGAQII 182
Query: 200 IEDSKKFAMQME 211
+ + ++E
Sbjct: 183 GLWADRVLAKLE 194
>gi|5106982|gb|AAD39910.1|AF119047_3 ExbB-like protein [Vibrio parahaemolyticus]
Length = 231
Score = 69.4 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 31/192 (16%), Positives = 67/192 (34%), Gaps = 22/192 (11%)
Query: 29 TLLFIFSILSWSVIIQKSVN----FITLRRQFREFEQLF--WSGQSLETVCKSLKNHHNI 82
L I S L+ +I ++ + R+ + + +E + L +
Sbjct: 16 WPLIICSALTVMIIAERLFQVFISLGVGKSAIRQHLASLDPTNSRDIEALADELSGKRPL 75
Query: 83 GLAAIFMS-AMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSA 141
+ M A + KS + A + + ++ L L +
Sbjct: 76 LYRGVAMLLAHHSFAKSLREDAAGMW-------------LQEKRHQLHSGLRLLTLIGVI 122
Query: 142 GLLVGILGAVLGMMGFFQSIAGYYSNNV--VSIPGIIESLISILLGLCVSIPSSIAYNKF 199
L+G+LG VLG++ F+ IA N G+ ++ + GL +++P+
Sbjct: 123 SPLIGLLGTVLGLIEMFKGIAVSTGNITPNDLADGLGLAMRTTAAGLIIALPAISGAQII 182
Query: 200 IEDSKKFAMQME 211
+ + ++E
Sbjct: 183 GLWADRVLAKLE 194
>gi|322378792|ref|ZP_08053221.1| biopolymer transport protein (ExbB) [Helicobacter suis HS1]
gi|322380641|ref|ZP_08054793.1| biopolymer transport protein [Helicobacter suis HS5]
gi|321146963|gb|EFX41711.1| biopolymer transport protein [Helicobacter suis HS5]
gi|321148822|gb|EFX43293.1| biopolymer transport protein (ExbB) [Helicobacter suis HS1]
Length = 150
Score = 69.4 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 22/83 (26%), Positives = 39/83 (46%), Gaps = 2/83 (2%)
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSN--NVVSIPGIIESLISILLGL 186
+ L+ L + S VG+LG VLG+M F ++ + G+ +L + GL
Sbjct: 59 SRNLTTLYIIYSNAPYVGLLGTVLGVMVTFYDMSTSSTGLDAKAITLGLSLALKATAFGL 118
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQ 209
V+IP+ + YN + + + Q
Sbjct: 119 VVAIPTLVVYNAMLRKTDVLSEQ 141
>gi|320353611|ref|YP_004194950.1| outer membrane transport energization protein ExbB [Desulfobulbus
propionicus DSM 2032]
gi|320122113|gb|ADW17659.1| outer membrane transport energization protein ExbB [Desulfobulbus
propionicus DSM 2032]
Length = 139
Score = 69.4 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 29/101 (28%), Positives = 49/101 (48%), Gaps = 1/101 (0%)
Query: 112 RIDRMMDVAIARELE-EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
R R+ + R LE +T KL + ++ + +G+LG VLG+M F I +
Sbjct: 35 RTTRVDEYQDRRALELHLTHKLHLIATIGANAPYIGLLGTVLGIMLTFHDIGAAGFDTTK 94
Query: 171 SIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
+ G+ +L + LGL V+IP+ YN + K +Q +
Sbjct: 95 IMTGLALALKATALGLLVAIPAVTLYNLLLRRCKVLLIQWD 135
>gi|325579234|ref|ZP_08149190.1| TonB-system energizer ExbB [Haemophilus parainfluenzae ATCC 33392]
gi|325159469|gb|EGC71603.1| TonB-system energizer ExbB [Haemophilus parainfluenzae ATCC 33392]
Length = 150
Score = 69.1 bits (168), Expect = 4e-10, Method: Composition-based stats.
Identities = 21/96 (21%), Positives = 43/96 (44%), Gaps = 4/96 (4%)
Query: 112 RIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA---GYYSNN 168
R+D I ++ ++ + ++ + VG+LG V+G++ F I G
Sbjct: 40 RVDVAKYSNIHALEIDLNRNMTVISTVGANAPYVGLLGTVIGILLTFFQIGHGDGEVDAG 99
Query: 169 VVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSK 204
+ + + +L + LG+ V+IPS + YN +
Sbjct: 100 AIMMH-LSLALKATALGILVAIPSMMFYNGLGRKVE 134
>gi|218676069|ref|YP_002394888.1| Biopolymer transport exbB1 protein [Vibrio splendidus LGP32]
gi|218324337|emb|CAV25684.1| Biopolymer transport exbB1 protein [Vibrio splendidus LGP32]
Length = 233
Score = 69.1 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 30/191 (15%), Positives = 69/191 (36%), Gaps = 20/191 (10%)
Query: 29 TLLFIFSILSWSVIIQKSVNFITL----RRQFREFEQLFW--SGQSLETVCKSLKNHHNI 82
L I S L+ +I ++ + +R R + + +E + +S+
Sbjct: 16 WPLLICSALTAMIIAERIFQVMLSIGVGKRAIRHELNQISPTNSKEIEALAQSISGKRP- 74
Query: 83 GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAG 142
+ +S + S +D + + ++ L LG +
Sbjct: 75 ----LLYKGVS---MLLAHHSFSKGLREDAAGIWLQ----EKRHQLHAGLRLLGLIGVIS 123
Query: 143 LLVGILGAVLGMMGFFQSIAGYYSNNV--VSIPGIIESLISILLGLCVSIPSSIAYNKFI 200
L+G+LG VLG++ F+ +A + G+ ++ + GL +++P+
Sbjct: 124 PLIGLLGTVLGLIEMFKGVAATTGSITPNDLADGLGLAMRTTAAGLMIALPAISGAQLLG 183
Query: 201 EDSKKFAMQME 211
+ + Q+E
Sbjct: 184 LWADRVLAQLE 194
>gi|328470246|gb|EGF41157.1| ExbB-like protein [Vibrio parahaemolyticus 10329]
Length = 230
Score = 69.1 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 31/192 (16%), Positives = 67/192 (34%), Gaps = 22/192 (11%)
Query: 29 TLLFIFSILSWSVIIQKSVN----FITLRRQFREFEQLF--WSGQSLETVCKSLKNHHNI 82
L I S L+ +I ++ + R+ + + +E + L +
Sbjct: 16 WPLIICSALTVMIISERLFQVFISLGVGKSAIRQHLASLDPTNSRDIEALADELSGKRPL 75
Query: 83 GLAAIFMS-AMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSA 141
+ M A + KS + A + + ++ L L +
Sbjct: 76 LYRGVAMLLAHHSFAKSLREDAAGMW-------------LQEKRHQLHSGLRLLTLIGVI 122
Query: 142 GLLVGILGAVLGMMGFFQSIAGYYSNNV--VSIPGIIESLISILLGLCVSIPSSIAYNKF 199
L+G+LG VLG++ F+ IA N G+ ++ + GL +++P+
Sbjct: 123 SPLIGLLGTVLGLIEMFKGIAVSTGNITPNDLADGLGLAMRTTAAGLIIALPAISGAQII 182
Query: 200 IEDSKKFAMQME 211
+ + ++E
Sbjct: 183 GLWADRVLAKLE 194
>gi|94263161|ref|ZP_01286979.1| MotA/TolQ/ExbB proton channel [delta proteobacterium MLMS-1]
gi|93456532|gb|EAT06646.1| MotA/TolQ/ExbB proton channel [delta proteobacterium MLMS-1]
Length = 211
Score = 69.1 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 34/197 (17%), Positives = 65/197 (32%), Gaps = 26/197 (13%)
Query: 17 FMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSL 76
F+ G AV + +L + +L W++II++ + L V L
Sbjct: 13 FLDAGGAVLWV--ILAVALLL-WTLIIERYWYQRLVF------------PTELAAVRARL 57
Query: 77 KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRI---DRMMDVAIARELEEITEKLS 133
E D P + R R+ ++R + L
Sbjct: 58 SRLPGSPPT-------GEATGINDGAGEPPPPVLRRSWLDARIRRKEVSRLRHRLGNSLF 110
Query: 134 FLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPS 192
+ ++ L+G+LG V GM+ F + + + G+ + I + GL V+I
Sbjct: 111 LIRTLIMLCPLLGLLGTVTGMIQVFDVLGFSGTGDPRAMAAGVSRATIPTMAGLVVAISG 170
Query: 193 SIAYNKFIEDSKKFAMQ 209
+ + A +
Sbjct: 171 YFFSINLQRSADRLARR 187
>gi|213586287|ref|ZP_03368113.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Typhi str. E98-0664]
Length = 50
Score = 68.7 bits (167), Expect = 5e-10, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 30/50 (60%)
Query: 171 SIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAI 220
PGI E+LI+ +GL +IP+ +AYN+ + K + + F EF+AI
Sbjct: 1 VAPGIAEALIATAIGLFAAIPAVMAYNRLNQRVNKLELNYDNFMEEFTAI 50
>gi|296535347|ref|ZP_06897549.1| ferric siderophore transport system protein ExbB [Roseomonas
cervicalis ATCC 49957]
gi|296264331|gb|EFH10754.1| ferric siderophore transport system protein ExbB [Roseomonas
cervicalis ATCC 49957]
Length = 85
Score = 68.7 bits (167), Expect = 6e-10, Method: Composition-based stats.
Identities = 16/61 (26%), Positives = 31/61 (50%)
Query: 7 AIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG 66
D+S+ LF+Q VK ++ L + S++ W++I++KS+ LRR+ +
Sbjct: 19 GGPDMSMLGLFLQADWVVKAVMIALALASVICWAIIVEKSLLLGRLRREVAQLVAAVAPA 78
Query: 67 Q 67
Sbjct: 79 G 79
>gi|254467391|ref|ZP_05080801.1| MotA/TolQ/ExbB proton channel [Rhodobacterales bacterium Y4I]
gi|206684392|gb|EDZ44875.1| MotA/TolQ/ExbB proton channel [Rhodobacterales bacterium Y4I]
Length = 316
Score = 68.7 bits (167), Expect = 6e-10, Method: Composition-based stats.
Identities = 38/196 (19%), Positives = 73/196 (37%), Gaps = 18/196 (9%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITL----RRQFREFEQLFWSGQSLETVCKSLKNHHNIG 83
I + S+++ ++I+ K + R + + F G +
Sbjct: 119 IWAIAALSVITLALILWKIWRLALIGAWSRGKAGRAVEAFERGDT------------GTA 166
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
+A + + + +DR L L L +++
Sbjct: 167 MAIVKGRIGIRSRVVAAALSALTALPEDRAREETARVAKLHLGSAATGLGALELIATIAP 226
Query: 144 LVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIE 201
L+G+LG VLGM+ FQ++ AG ++ + GI E+L++ G+ V+IP+S A F
Sbjct: 227 LLGLLGTVLGMIAAFQALQAAGARADPALLAGGIWEALLTTAAGMAVAIPASAALTWFEA 286
Query: 202 DSKKFAMQMEGFANEF 217
+ +E A
Sbjct: 287 VISRIRRDIEDSATRL 302
>gi|223038906|ref|ZP_03609198.1| TonB-system energizer ExbB [Campylobacter rectus RM3267]
gi|222879879|gb|EEF14968.1| TonB-system energizer ExbB [Campylobacter rectus RM3267]
Length = 146
Score = 68.7 bits (167), Expect = 6e-10, Method: Composition-based stats.
Identities = 22/82 (26%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYS-NNVVSIPGIIESLISILLGLC 187
T L+ +G + S VG+LG V+G++ F + + + G+ +L + LGLC
Sbjct: 57 TRNLTCIGVIGSNAPYVGLLGTVIGIIITFYDMGQSGNFETSTIMTGLSIALKATALGLC 116
Query: 188 VSIPSSIAYNKFIEDSKKFAMQ 209
V+IPS ++ + ++K +
Sbjct: 117 VAIPSLAIHSFALRSAQKKINE 138
>gi|315453872|ref|YP_004074142.1| exbB\tolQ family transport protein [Helicobacter felis ATCC 49179]
gi|315132924|emb|CBY83552.1| exbB\tolQ family transport protein [Helicobacter felis ATCC 49179]
Length = 182
Score = 68.7 bits (167), Expect = 6e-10, Method: Composition-based stats.
Identities = 17/86 (19%), Positives = 38/86 (44%), Gaps = 1/86 (1%)
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLIS 181
++ L+ T L L ++S +G+ G V+ ++ F + S + V P I ++L++
Sbjct: 83 SQVLQSNTTGLVLLSIIASTAPFIGLFGTVVEILDAFGRLGAQVSFD-VIAPVISKALVA 141
Query: 182 ILLGLCVSIPSSIAYNKFIEDSKKFA 207
G+ +IP+ + +
Sbjct: 142 TAGGILTAIPAYSFFLILKRKVYDLS 167
>gi|86144491|ref|ZP_01062823.1| ExbB-like protein [Vibrio sp. MED222]
gi|85837390|gb|EAQ55502.1| ExbB-like protein [Vibrio sp. MED222]
Length = 233
Score = 68.7 bits (167), Expect = 6e-10, Method: Composition-based stats.
Identities = 30/191 (15%), Positives = 69/191 (36%), Gaps = 20/191 (10%)
Query: 29 TLLFIFSILSWSVIIQKSVNFITL----RRQFREFEQLFW--SGQSLETVCKSLKNHHNI 82
L I S L+ +I ++ + +R R + + +E + +S+
Sbjct: 16 WPLLICSALTAMIIAERIFQVMLSIGVGKRAIRHELNQISPTNSKEIEALAQSISGKRP- 74
Query: 83 GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAG 142
+ +S + S +D + + ++ L LG +
Sbjct: 75 ----LLYKGVS---MLLAHHSFSKGLREDAAGIWLQ----EKRHQLHAGLRLLGLIGVIS 123
Query: 143 LLVGILGAVLGMMGFFQSIAGYYSNNV--VSIPGIIESLISILLGLCVSIPSSIAYNKFI 200
L+G+LG VLG++ F+ +A + G+ ++ + GL +++P+
Sbjct: 124 PLIGLLGTVLGLIEMFKGVAATTGSITPNDLADGLGLAMRTTAAGLMIALPAISGAQLLG 183
Query: 201 EDSKKFAMQME 211
+ + Q+E
Sbjct: 184 LWADRVLAQLE 194
>gi|52424570|ref|YP_087707.1| TolQ protein [Mannheimia succiniciproducens MBEL55E]
gi|52306622|gb|AAU37122.1| TolQ protein [Mannheimia succiniciproducens MBEL55E]
Length = 152
Score = 68.7 bits (167), Expect = 7e-10, Method: Composition-based stats.
Identities = 14/79 (17%), Positives = 37/79 (46%), Gaps = 2/79 (2%)
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYS--NNVVSIPGIIESLISILLG 185
+ L+ + ++ + +G+LG V+G++ F + + + + +L + +G
Sbjct: 57 LNRHLTIISTIGANAPYIGLLGTVVGILLTFYDLGNSGGDIDASAIMLHLSLALKATAVG 116
Query: 186 LCVSIPSSIAYNKFIEDSK 204
+ V+IPS + Y+ +
Sbjct: 117 ILVAIPSMVFYSALGRKVE 135
>gi|260770034|ref|ZP_05878967.1| ferric siderophore transport system biopolymer transport protein
ExbB [Vibrio furnissii CIP 102972]
gi|260615372|gb|EEX40558.1| ferric siderophore transport system biopolymer transport protein
ExbB [Vibrio furnissii CIP 102972]
Length = 230
Score = 68.7 bits (167), Expect = 7e-10, Method: Composition-based stats.
Identities = 31/193 (16%), Positives = 70/193 (36%), Gaps = 24/193 (12%)
Query: 29 TLLFIFSILSWSVIIQKSVNFI--------TLRRQFREFEQLFWSGQSLETVCKSLKNHH 80
L I S L+ ++ +++ I +RR + LE + ++L
Sbjct: 16 WPLLICSALTVMILAERAFQVILSLGVGKGAIRRHLNGISPT--NATQLEALAEALAGKR 73
Query: 81 NIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSS 140
+ ++ M + + I +Q+ + ++ L L +
Sbjct: 74 PLLYRSVAMLLAHHAFPKALREDAAGIWLQE------------KRHQLNAGLRLLTLIGV 121
Query: 141 AGLLVGILGAVLGMMGFFQSIAGYYSNNV--VSIPGIIESLISILLGLCVSIPSSIAYNK 198
L+G+LG VLG++ F+ +A N G+ ++ + GL +++P+
Sbjct: 122 ISPLIGLLGTVLGLIEMFKGVAASSGNITPNDLADGLGIAMRTTAAGLMIALPAIAGAQL 181
Query: 199 FIEDSKKFAMQME 211
+ K ++E
Sbjct: 182 LSLWADKVMAKLE 194
>gi|77918458|ref|YP_356273.1| biopolymer transport protein [Pelobacter carbinolicus DSM 2380]
gi|77544541|gb|ABA88103.1| outer membrane transport energization protein ExbB [Pelobacter
carbinolicus DSM 2380]
Length = 211
Score = 68.3 bits (166), Expect = 7e-10, Method: Composition-based stats.
Identities = 42/201 (20%), Positives = 78/201 (38%), Gaps = 15/201 (7%)
Query: 27 IITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAA 86
++ + + S W +I K+ RQ L+ L + +
Sbjct: 17 VMIPIGVLSAWMWILIALKADWIRRAGRQSL----------PLDDAMACLCSETPPPTSG 66
Query: 87 --IFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLL 144
A++ + K D R RI +VA+ R+L ++ + + +++A L
Sbjct: 67 CCPKALALAYFMKQQDGPGRPTDNEPRRIFF--EVAVRRQLRDLYRFIPAIMILAAAAPL 124
Query: 145 VGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISILLGLCVSIPSSIAYNKFIEDS 203
+G+LG V GM+ F+ I Y N ++ GI E+L++ GL V+IP I
Sbjct: 125 LGLLGTVSGMVETFRVIGLYGMGNAQAMASGIREALLTTQAGLLVAIPGLIVGQIMRRKV 184
Query: 204 KKFAMQMEGFANEFSAILSRQ 224
+ + F L ++
Sbjct: 185 RGLHQDLLVFHRAVCQWLEKE 205
>gi|182679966|ref|YP_001834112.1| tonB-system energizer ExbB [Beijerinckia indica subsp. indica ATCC
9039]
gi|182635849|gb|ACB96623.1| tonB-system energizer ExbB [Beijerinckia indica subsp. indica ATCC
9039]
Length = 142
Score = 68.3 bits (166), Expect = 8e-10, Method: Composition-based stats.
Identities = 24/85 (28%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
+T++L + S++S +G+LG VLG+M F ++ + + + G+ +L + +GL
Sbjct: 54 LTKRLIVVASVASNAPYIGLLGTVLGIMLTFYNMNLEANADAGKIMVGLALALKATAVGL 113
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQME 211
V++ S +AYN + +K +Q E
Sbjct: 114 IVALVSVVAYNGLVRKAKVLMLQWE 138
>gi|92116342|ref|YP_576071.1| MotA/TolQ/ExbB proton channel [Nitrobacter hamburgensis X14]
gi|91799236|gb|ABE61611.1| outer membrane transport energization protein ExbB [Nitrobacter
hamburgensis X14]
Length = 142
Score = 68.3 bits (166), Expect = 8e-10, Method: Composition-based stats.
Identities = 24/86 (27%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV-SIPGIIESLISILLG 185
E+T++L + S++S +G+LG VLG+M F +++ + +V + G+ +L + +G
Sbjct: 53 ELTKRLLVVASVASNAPYIGLLGTVLGIMLTFYNMSLDAAADVTKIMLGLALALKATAVG 112
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQME 211
L V++ S YN + K ++ E
Sbjct: 113 LVVALISVAIYNALLRKVKVLMLRWE 138
>gi|85704524|ref|ZP_01035626.1| MotA/TolQ/ExbB proton channel family protein [Roseovarius sp. 217]
gi|85670932|gb|EAQ25791.1| MotA/TolQ/ExbB proton channel family protein [Roseovarius sp. 217]
Length = 208
Score = 67.9 bits (165), Expect = 9e-10, Method: Composition-based stats.
Identities = 48/195 (24%), Positives = 81/195 (41%), Gaps = 14/195 (7%)
Query: 27 IITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLF--WSGQSLETVCKSLKNHHNIGL 84
II +L + S+LS ++I+ K + +R WS ET +L
Sbjct: 14 IIVILALMSLLSVALIVVKVLQLAHVRSAGTARHDALERWSKGDRETAIANLAK-GTSPA 72
Query: 85 AAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLL 144
I A+ A + ++ + E+E ++ + L ++ L
Sbjct: 73 DRILHYAL---------NAAQGKMPRKPLEAELVRRGNAEVEVMSRHIRLLELVAMVSPL 123
Query: 145 VGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIED 202
+G+LG VLGM+ FQ + A +N V GI ++L++ GL V+IP++IA
Sbjct: 124 LGLLGTVLGMIQSFQELELAQGAANASVLAGGIWQALLTTAAGLVVAIPAAIAATLLATR 183
Query: 203 SKKFAMQMEGFANEF 217
A +E A EF
Sbjct: 184 VDAAAHDIESAAGEF 198
>gi|217978803|ref|YP_002362950.1| tonB-system energizer ExbB [Methylocella silvestris BL2]
gi|217504179|gb|ACK51588.1| tonB-system energizer ExbB [Methylocella silvestris BL2]
Length = 142
Score = 67.9 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 26/86 (30%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV-SIPGIIESLISILLG 185
E+T++L+ + S++S +G+LG VLG+M F ++ S + + G+ +L + +G
Sbjct: 53 ELTKRLTIVASVASNAPYIGLLGTVLGVMLTFYNMNLEASTDASKIMVGLALALKATAVG 112
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQME 211
L V++ S AYN + +K +Q E
Sbjct: 113 LVVALVSVAAYNGLLRKTKVLLLQWE 138
>gi|34557275|ref|NP_907090.1| biopolymer transport protein ExbB [Wolinella succinogenes DSM 1740]
gi|34482991|emb|CAE09990.1| BIOPOLYMER TRANSPORT PROTEIN EXBB [Wolinella succinogenes]
Length = 142
Score = 67.9 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 24/85 (28%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVS-IPGIIESLISILLGL 186
++++L+ + ++ S VG+LG V G+M F I + S + G+ +L + LGL
Sbjct: 53 LSKRLTIIATIGSNAPYVGLLGTVFGIMMTFLEIGQSGVADSNSIMTGLALALKATALGL 112
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQME 211
V+IPS + YN + S+ + +
Sbjct: 113 LVAIPSVVFYNLLVRKSEVLLAEWD 137
>gi|152979664|ref|YP_001345293.1| TonB-system energizer ExbB type-2 [Actinobacillus succinogenes
130Z]
gi|150841387|gb|ABR75358.1| TonB-system energizer ExbB type-2 [Actinobacillus succinogenes
130Z]
Length = 151
Score = 67.9 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 15/79 (18%), Positives = 37/79 (46%), Gaps = 2/79 (2%)
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYS--NNVVSIPGIIESLISILLG 185
+T L+ + ++ + +G+LG V+G++ F + + + + +L + +G
Sbjct: 56 LTRHLTIISTIGANAPYIGLLGTVIGILLTFYDLGTSAGDIDAAAIMLHLSLALKATAVG 115
Query: 186 LCVSIPSSIAYNKFIEDSK 204
+ V+IPS + Y+
Sbjct: 116 ILVAIPSMVFYSALGRRVD 134
>gi|126658810|ref|ZP_01729954.1| MotA/TolQ/ExbB proton channel [Cyanothece sp. CCY0110]
gi|126619908|gb|EAZ90633.1| MotA/TolQ/ExbB proton channel [Cyanothece sp. CCY0110]
Length = 217
Score = 67.9 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 40/197 (20%), Positives = 87/197 (44%), Gaps = 21/197 (10%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+S+ F+ G+ + L IFS+L ++II++++ + ++ + + ++
Sbjct: 1 MSLTNFFVSGGI----VAWPLLIFSLLGVALIIERAIFWYRIKSRQHKIVTTVLKLYRVD 56
Query: 71 T---VCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
LK + ++ + IF+ A++ + + R+ ++ A EL
Sbjct: 57 QRVAAIAKLKQNLDLPICRIFLEALA---------LENATPTEFRL--ALETATQAELPL 105
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAG---YYSNNVVSIPGIIESLISILL 184
+ ++ + L+G+LG +LG+M F S+ +N GI E+L S ++
Sbjct: 106 FKRFNTLFQTIIAVSPLLGLLGTILGLMQSFASLDIGNVAGTNAAGVTGGISEALTSTVM 165
Query: 185 GLCVSIPSSIAYNKFIE 201
GL V+I + + N F
Sbjct: 166 GLVVAIFTLLFANSFRS 182
>gi|152990962|ref|YP_001356684.1| biopolymer ExbB/TolQ family transporter [Nitratiruptor sp. SB155-2]
gi|151422823|dbj|BAF70327.1| biopolymer transport protein, ExbB/TolQ family [Nitratiruptor sp.
SB155-2]
Length = 186
Score = 67.9 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 22/109 (20%), Positives = 42/109 (38%), Gaps = 11/109 (10%)
Query: 118 DVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIE 177
D I +E T L+FL +S +G+ G V+ ++ F + ++ I E
Sbjct: 84 DFCIQNGTKEATSGLTFLSIAASTSPFIGLFGTVVSILETFYVLGSTKASISTISSSIGE 143
Query: 178 SLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
+L++ G+ V++ + + A E LS Q +
Sbjct: 144 ALVATAAGIFVAVFAYSYHLILKRK-----------AYELVTTLSMQLD 181
>gi|148973950|ref|ZP_01811483.1| ExbB-like protein [Vibrionales bacterium SWAT-3]
gi|145965647|gb|EDK30895.1| ExbB-like protein [Vibrionales bacterium SWAT-3]
Length = 233
Score = 67.9 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 31/191 (16%), Positives = 68/191 (35%), Gaps = 20/191 (10%)
Query: 29 TLLFIFSILSWSVIIQKSVNFITL----RRQFREFEQLFW--SGQSLETVCKSLKNHHNI 82
L I S L+ +I ++ + +R R + Q +E + S+
Sbjct: 16 WPLLICSALTAMIIAERIFQVMLSIGVGKRAIRRELNQISPTNSQEIEALAHSISGKRP- 74
Query: 83 GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAG 142
+ +S + S +D + + ++ L LG +
Sbjct: 75 ----LLYKGVS---MLLAHHSFSKGLREDAAGIWLQ----EKRHQLHAGLRLLGLIGVIS 123
Query: 143 LLVGILGAVLGMMGFFQSIAGYYSNNV--VSIPGIIESLISILLGLCVSIPSSIAYNKFI 200
L+G+LG VLG++ F+ +A + G+ ++ + GL +++P+
Sbjct: 124 PLIGLLGTVLGLIEMFKGVAATTGSITPNDLADGLGLAMRTTAAGLMIALPAISGAQLLG 183
Query: 201 EDSKKFAMQME 211
+ + Q+E
Sbjct: 184 LWADRVLAQLE 194
>gi|315182558|gb|ADT89471.1| ExbB-like protein [Vibrio furnissii NCTC 11218]
Length = 230
Score = 67.9 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 30/193 (15%), Positives = 70/193 (36%), Gaps = 24/193 (12%)
Query: 29 TLLFIFSILSWSVIIQKSVNFI--------TLRRQFREFEQLFWSGQSLETVCKSLKNHH 80
L + S L+ ++ +++ I +RR + LE + ++L
Sbjct: 16 WPLLVCSALTVMILAERAFQVILSLGVGKGAIRRHLNGISPT--NATQLEALAEALAGKR 73
Query: 81 NIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSS 140
+ ++ M + + I +Q+ + ++ L L +
Sbjct: 74 PLLYRSVAMLLAHHAFPKALREDAAGIWLQE------------KRHQLNAGLRLLTLIGV 121
Query: 141 AGLLVGILGAVLGMMGFFQSIAGYYSNNV--VSIPGIIESLISILLGLCVSIPSSIAYNK 198
L+G+LG VLG++ F+ +A N G+ ++ + GL +++P+
Sbjct: 122 ISPLIGLLGTVLGLIEMFKGVAASSGNITPNDLADGLGIAMRTTAAGLMIALPAIAGAQL 181
Query: 199 FIEDSKKFAMQME 211
+ K ++E
Sbjct: 182 LSLWADKVMAKLE 194
>gi|94265096|ref|ZP_01288862.1| MotA/TolQ/ExbB proton channel [delta proteobacterium MLMS-1]
gi|93454426|gb|EAT04721.1| MotA/TolQ/ExbB proton channel [delta proteobacterium MLMS-1]
Length = 211
Score = 67.5 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 34/197 (17%), Positives = 64/197 (32%), Gaps = 26/197 (13%)
Query: 17 FMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSL 76
F+ G AV + +L + +L W++II++ + L V L
Sbjct: 13 FLDAGGAVLWV--ILAVALLL-WTLIIERYWYQRLVF------------PTELAAVRDRL 57
Query: 77 KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRI---DRMMDVAIARELEEITEKLS 133
E D P + R R+ ++R + L
Sbjct: 58 SRLPGSPST-------GEATGINDGVGEPPPPVLRRSWLDARIHRKEVSRLRHRLGNSLF 110
Query: 134 FLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPS 192
+ ++ L+G+LG V GM+ F + + + G+ + I + GL V+I
Sbjct: 111 LIRTLIMLCPLLGLLGTVTGMIQVFDVLGFSGTGDPRAMAAGVSRATIPTMAGLVVAISG 170
Query: 193 SIAYNKFIEDSKKFAMQ 209
+ A +
Sbjct: 171 YFFSINLQRSADGLARR 187
>gi|149200004|ref|ZP_01877030.1| putative biopolymer transport protein [Lentisphaera araneosa
HTCC2155]
gi|149136877|gb|EDM25304.1| putative biopolymer transport protein [Lentisphaera araneosa
HTCC2155]
Length = 224
Score = 67.5 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 21/128 (16%), Positives = 51/128 (39%), Gaps = 2/128 (1%)
Query: 100 DKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQ 159
D+ D + + + ++ I KLS++ ++ ++G+LG VLGMM F
Sbjct: 97 DQMHSDSDSSYDMVKDAAESEGSHQIGIIHHKLSYVSDIAKIAPMIGLLGTVLGMMQAFS 156
Query: 160 SIAG--YYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEF 217
+ + GI +++++ GL V + + ++ + + +E +
Sbjct: 157 GLKQDFGAVKPIALADGIAQAMVTTAAGLIVGLIAMFCHSLLRQRAGHLTDILEQKSARV 216
Query: 218 SAILSRQT 225
++
Sbjct: 217 LRRFMKKA 224
>gi|238927096|ref|ZP_04658856.1| possible MotA/TolQ/ExbB proton channel [Selenomonas flueggei ATCC
43531]
gi|238885076|gb|EEQ48714.1| possible MotA/TolQ/ExbB proton channel [Selenomonas flueggei ATCC
43531]
Length = 150
Score = 67.1 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 26/141 (18%), Positives = 48/141 (34%), Gaps = 13/141 (9%)
Query: 75 SLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSF 134
L ++ I S M G + + ++ E L +
Sbjct: 10 KLVQEFPSAISRIVESGME------------NAGTEASMKGAFADRMSMEAINFRRYLDY 57
Query: 135 LGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSI 194
L ++ + L+G+LG V GM+ F + ++ + E+L++ GLCV+I +
Sbjct: 58 LSAIVTIAPLLGLLGTVTGMIQTFSVLDAGGGAAAITGG-VGEALVATATGLCVAIIAFC 116
Query: 195 AYNKFIEDSKKFAMQMEGFAN 215
Y F E
Sbjct: 117 VYTYFSHQLDAIVTDTERLCT 137
>gi|149199471|ref|ZP_01876506.1| putative biopolymer transport protein exbB [Lentisphaera araneosa
HTCC2155]
gi|149137406|gb|EDM25824.1| putative biopolymer transport protein exbB [Lentisphaera araneosa
HTCC2155]
Length = 215
Score = 67.1 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 22/108 (20%), Positives = 48/108 (44%), Gaps = 2/108 (1%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYS--NNVV 170
++ + A E + +++ L +++ ++G+LG V ++ F+ I S N
Sbjct: 92 LEGAIQEAARNEQFRLEKRMDVLATLAQGCGVLGLLGTVAKLIEAFRQIGIEGSFVNLTN 151
Query: 171 SIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFS 218
P + +L++ G+ VS + + YN ++ + ME A E
Sbjct: 152 LAPYVGGALVAAASGMTVSFVAYMIYNVYLSRIRSILRDMEKTAYEMM 199
>gi|291568109|dbj|BAI90381.1| putative protein transporter [Arthrospira platensis NIES-39]
Length = 306
Score = 67.1 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 47/205 (22%), Positives = 73/205 (35%), Gaps = 22/205 (10%)
Query: 28 ITLLFIFSILSWSVIIQKSV----NFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIG 83
+ L + SILS S II++ RR + GQ + K +N
Sbjct: 14 MWPLMVLSILSISTIIERLWFWGNTLTRERRIVNRVLDVARRGQ-WGMAYQIAKQSNNRP 72
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
+ F + + + + + M L ++ +
Sbjct: 73 MGRFFYAPLKLATPDPQLFSLALEAAAEEEFVSMR-----------RGDKILEAVIALAP 121
Query: 144 LVGILGAVLGMMGFFQSI----AGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKF 199
++G+LG VLG++ SI G S V++ GI E+LIS GL V+I S Y F
Sbjct: 122 MLGLLGTVLGLINSLGSIRLGDIGTSSAADVTL-GIGEALISTATGLIVAIISLAFYRLF 180
Query: 200 IEDSKKFAMQMEGFANEFSAILSRQ 224
S NE +L RQ
Sbjct: 181 QGFSFSQVKVFRKAGNEL-ELLYRQ 204
>gi|209524895|ref|ZP_03273441.1| MotA/TolQ/ExbB proton channel [Arthrospira maxima CS-328]
gi|209494774|gb|EDZ95083.1| MotA/TolQ/ExbB proton channel [Arthrospira maxima CS-328]
Length = 306
Score = 67.1 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 49/205 (23%), Positives = 77/205 (37%), Gaps = 22/205 (10%)
Query: 28 ITLLFIFSILSWSVIIQKSV----NFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIG 83
+ L + SILS S II++ RR + GQ + K +N
Sbjct: 14 MWPLMVLSILSISTIIERLWFWGNTLTRERRIVNRVLDVARRGQ-WGMAYQIAKQSNNRP 72
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
+ F + + +P + ++ A E + L ++ +
Sbjct: 73 MGRFFYAPLK---------LATPDP--ELFSLALEAAAEEEFVSMRRGDKILEAVIALAP 121
Query: 144 LVGILGAVLGMMGFFQSI----AGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKF 199
++G+LG VLG++ SI G S V++ GI E+LIS GL V+I S Y F
Sbjct: 122 MLGLLGTVLGLINSLGSIRLGDIGTSSAADVTL-GIGEALISTATGLIVAIISLAFYRLF 180
Query: 200 IEDSKKFAMQMEGFANEFSAILSRQ 224
S NE +L RQ
Sbjct: 181 QGFSFSQVKVFRKAGNEL-ELLYRQ 204
>gi|119513365|ref|ZP_01632399.1| biopolymer transport protein [Nodularia spumigena CCY9414]
gi|119461974|gb|EAW42977.1| biopolymer transport protein [Nodularia spumigena CCY9414]
Length = 217
Score = 67.1 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 40/226 (17%), Positives = 87/226 (38%), Gaps = 29/226 (12%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+ I LF G+ ++ LF FS+L+ ++II++ ++ + + + + L+
Sbjct: 1 MGINNLFTAGGV----VMWPLFGFSVLAVALIIERIRFWVRINNRQSRVIRDVLNLYRLD 56
Query: 71 T---VCKSLKNHHNIGLAAIFMSAMSE-------WKKSCDKGARSPIGIQDRIDRMMDVA 120
L+ + ++ LA IF+S + ++ + + A++ I + R + +
Sbjct: 57 NVVGAMDKLRKNADLPLARIFLSPLELEEPNPEEFRLALESEAQAEIPLLKRFQNIFETI 116
Query: 121 IARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLI 180
I S A L +G +G + GI E+L+
Sbjct: 117 IGLAPLLGLLGTVLGLIASFASLDIGDVG---------------GTKTAGVTAGISEALV 161
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
S GL V+I + + N F + ++ + + + R+ E
Sbjct: 162 STATGLVVAIFTLLFANSFRGLYIRQIALIQEYGGQLELLYRRRYE 207
>gi|301155538|emb|CBW15006.1| unnamed protein product [Haemophilus parainfluenzae T3T1]
Length = 150
Score = 66.8 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 16/80 (20%), Positives = 38/80 (47%), Gaps = 4/80 (5%)
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA---GYYSNNVVSIPGIIESLISILL 184
+ ++ + ++ + VG+LG V+G++ F I G + + + +L + +
Sbjct: 56 LNRNMTVISTVGANAPYVGLLGTVIGILLTFYQIGHGDGEVDAGAIMMH-LSLALKATAI 114
Query: 185 GLCVSIPSSIAYNKFIEDSK 204
G+ V+IPS + Y+ +
Sbjct: 115 GILVAIPSMMFYSGLGRKVE 134
>gi|170077933|ref|YP_001734571.1| MotA/TolQ/ExbB proton channel family protein [Synechococcus sp. PCC
7002]
gi|169885602|gb|ACA99315.1| MotA/TolQ/ExbB proton channel family domain protein [Synechococcus
sp. PCC 7002]
Length = 215
Score = 66.8 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 44/203 (21%), Positives = 79/203 (38%), Gaps = 19/203 (9%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS--LETVCKSLKNHHNIGLA 85
+ L + SI++ S II++ + + +Q + + + V + + L
Sbjct: 1 MWPLVLLSIMALSTIIERLWFWWKVIQQSQRVQDKILDAAHYQWQAVSEIARTCQKHPLG 60
Query: 86 AIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLV 145
+ + + A P + ++ A EL + L ++ + L+
Sbjct: 61 RFLYAPLK-------QQATDP----EIFHLALEAAADEELANMRRGEKVLEAVIALSPLL 109
Query: 146 GILGAVLGMMGFFQSIA----GYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIE 201
G+LG VLG++ SI G S V++ GI ESL S +GL V+I + Y F
Sbjct: 110 GLLGTVLGLINSLGSIQLSDLGTDSTTGVTL-GISESLFSTAMGLIVAIVALAFYRLFQA 168
Query: 202 DSKKFAMQMEGFANEFSAILSRQ 224
S +E +L RQ
Sbjct: 169 LSSNQVRLFRQAGSEL-EMLYRQ 190
>gi|17232539|ref|NP_489087.1| biopolymer transport protein [Nostoc sp. PCC 7120]
gi|17134185|dbj|BAB76746.1| biopolymer transport protein [Nostoc sp. PCC 7120]
Length = 217
Score = 66.8 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 37/217 (17%), Positives = 82/217 (37%), Gaps = 29/217 (13%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+ I LF G+ ++ L FS+L ++I++++ ++ + + + + + L+
Sbjct: 1 MGIQNLFAAGGV----VMWPLLGFSVLGVALIVERTRFWLKINNRQQRVVRDVLNLYRLD 56
Query: 71 T---VCKSLKNHHNIGLAAIFMSAMSE-------WKKSCDKGARSPIGIQDRIDRMMDVA 120
L+ + ++ LA +F+SA+ ++ + + A++ I + R + D
Sbjct: 57 NVVGAIDKLRKNVDLPLARVFLSALELEEPTPEEFRLALESEAQAEIPLLKRFQNIFDTI 116
Query: 121 IARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLI 180
I S A L +G +G + GI E+L+
Sbjct: 117 IGLAPLLGLLGTVLGLITSFASLDIGDVG---------------GTKTAGVTAGISEALV 161
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEF 217
S GL V+I + N F + + + +
Sbjct: 162 STAAGLVVAIFTLFFANSFRGLYTRQMALFQEYGGQL 198
>gi|149376330|ref|ZP_01894093.1| Biopolymer transport protein [Marinobacter algicola DG893]
gi|149359344|gb|EDM47805.1| Biopolymer transport protein [Marinobacter algicola DG893]
Length = 235
Score = 66.8 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 26/211 (12%), Positives = 77/211 (36%), Gaps = 19/211 (9%)
Query: 17 FMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS---GQSLETVC 73
F + G + I +L I+ V ++ + + R G+ L+
Sbjct: 9 FQEGGFFMYPIAIVL----IIGLIVAAERYIYLSAQKITNRRDFNRLHHMIGGKDLKGAL 64
Query: 74 KSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLS 133
+A++ + + + + I+ M+ + + + ++
Sbjct: 65 NYATE-SGSAMASMIGFGLQRLARRQSR---------EEIEYAMEEGLLEVMPRLEKRTQ 114
Query: 134 FLGSMSSAGLLVGILGAVLGMMGFFQSIAGY--YSNNVVSIPGIIESLISILLGLCVSIP 191
+L ++++ L+G+LG ++G++ F ++A + I ++ + GL +IP
Sbjct: 115 YLSTLANISTLMGLLGTIIGLIAAFTAVAAADPSQKASLLSQSISVAMNTTAFGLMSAIP 174
Query: 192 SSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
+ ++ + + E + +++
Sbjct: 175 LLLIHSVLQTKTNEIIDSFEMAGIKVLNLIT 205
>gi|75908523|ref|YP_322819.1| MotA/TolQ/ExbB proton channel [Anabaena variabilis ATCC 29413]
gi|75702248|gb|ABA21924.1| outer membrane transport energization protein ExbB [Anabaena
variabilis ATCC 29413]
Length = 217
Score = 66.8 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 37/213 (17%), Positives = 84/213 (39%), Gaps = 21/213 (9%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+ I LF G+ ++ L FS+L ++I++++ ++ + + + + + L+
Sbjct: 1 MGIQNLFAAGGV----VMWPLLGFSVLGVALIVERARFWLKINNRQQRVVRDVLNLYRLD 56
Query: 71 T---VCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
L+ + ++ LA +F+SA + ++ E+
Sbjct: 57 NVVGAIDKLRKNVDLPLARVFLSA-----------LELEEPTPEEFRLALESEAQAEIPV 105
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGY---YSNNVVSIPGIIESLISILL 184
+ + ++ L+G+LG VLG++ F S+ + GI E+L+S
Sbjct: 106 LKRFQNIFDTIIGLAPLLGLLGTVLGLITSFASLDIGDVGGTKTAGVTAGISEALVSTAA 165
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEF 217
GL V+I + N F + + + +
Sbjct: 166 GLVVAIFTLFFANSFRGLYTRQMALFQEYGGQL 198
>gi|254446845|ref|ZP_05060320.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Verrucomicrobiae bacterium DG1235]
gi|198256270|gb|EDY80579.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Verrucomicrobiae bacterium DG1235]
Length = 205
Score = 66.4 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 49/219 (22%), Positives = 85/219 (38%), Gaps = 30/219 (13%)
Query: 14 FALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVC 73
+ + + G I+ LF+ ++++ V F+ G +T
Sbjct: 13 WEIILSGGW----IMIPLFLLGLVAFYV--------------GARLLLFFFRGNHKKTSV 54
Query: 74 KSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLS 133
++ + A E + G RS IQ+R + E+ + + ++
Sbjct: 55 ETCEEWVRDTNKAQGTVG--EIIRYSQDGVRSLEDIQNRFSEI----RTAEIPRLQQNIT 108
Query: 134 FLGSMSSAGLLVGILGAVLGMMGFFQSIA--GYYSNNVVSIPGIIESLISILLGLCVSIP 191
FLG M + L+G+LG VLGM+ F IA G S + GI +LI+ +GLC++IP
Sbjct: 109 FLGIMINTAPLLGLLGTVLGMLTTFYGIALGGSESTTSIVAGGIQVALITTQMGLCLAIP 168
Query: 192 SSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
I + + E F +I + G S
Sbjct: 169 GYIFVYFLKQKV----LDYESFLVRLESISLQHFSGKRS 203
>gi|289675557|ref|ZP_06496447.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. syringae
FF5]
Length = 84
Score = 66.4 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 16/84 (19%), Positives = 31/84 (36%), Gaps = 1/84 (1%)
Query: 85 AAIFMSAMSEWKKSCDK-GARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
A + + D QD ++R + I +E + + L S+ S
Sbjct: 1 ARLTDAGAQALAAPHDSPDLGHSWNRQDLLERSLRQQIHKERRRLESGMILLASIGSTAP 60
Query: 144 LVGILGAVLGMMGFFQSIAGYYSN 167
+G+ G V G++ +I+ S
Sbjct: 61 FIGLFGTVFGIIHALSAISQAKSA 84
>gi|289672761|ref|ZP_06493651.1| biopolymer transport protein ExbB [Pseudomonas syringae pv.
syringae FF5]
Length = 79
Score = 66.4 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Query: 22 LAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHN 81
+ V ++ L +FS+LSW++++ KS ++ + Q ++F ++FWS L T + +
Sbjct: 1 MIVPAVLWALILFSVLSWALLLIKSAQYVRQKSQNKQFTKVFWSAPDLLTAAEHSAQYPG 60
Query: 82 IGLAAIFMSAMSEWK 96
LA I S
Sbjct: 61 -ALARIANSGFEAMA 74
>gi|260431407|ref|ZP_05785378.1| MotA/TolQ/ExbB proton channel [Silicibacter lacuscaerulensis
ITI-1157]
gi|260415235|gb|EEX08494.1| MotA/TolQ/ExbB proton channel [Silicibacter lacuscaerulensis
ITI-1157]
Length = 234
Score = 66.4 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 38/193 (19%), Positives = 81/193 (41%), Gaps = 18/193 (9%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITL----RRQFREFEQLFWSGQSLETVCKSLKNHHNIG 83
I + S+ + ++I+ K + + R + + + G +L
Sbjct: 37 IWAIAALSVATLALILWKVWHLALMGAWSRGKVGRAVEAYLRGD--AAGALALVEGRRGI 94
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
+ + +++ ++ S ++ R+ +A + L L ++S
Sbjct: 95 RSQVLATSLRSLERL------SVEAAREETARVAKRQLAMARD----GLGALELIASIAP 144
Query: 144 LVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIE 201
L+G+LG VLGM+ FQ++ AG ++ + GI E+L++ G+ V+IP+S A F
Sbjct: 145 LLGLLGTVLGMIAAFQALQAAGSRADPALLAGGIWEALLTTAAGMAVAIPASAALTWFES 204
Query: 202 DSKKFAMQMEGFA 214
++ +E A
Sbjct: 205 VVERMRRDIEDNA 217
>gi|88857264|ref|ZP_01131907.1| putative TonB system-dependent transport protein [Pseudoalteromonas
tunicata D2]
gi|88820461|gb|EAR30273.1| putative TonB system-dependent transport protein [Pseudoalteromonas
tunicata D2]
Length = 175
Score = 66.4 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 24/126 (19%), Positives = 51/126 (40%), Gaps = 2/126 (1%)
Query: 91 AMSEWKKSCDKGARSPIGIQDRIDRMMDVA-IARELEEITEKLSFLGSMSSAGLLVGILG 149
++KK K + A ++R + +++ L F+ M + L+G+LG
Sbjct: 46 GYRQYKKLVKKTWFDRKERNSWNAEQIRQALVSRAKQRLSQNLPFINVMVAVCPLLGLLG 105
Query: 150 AVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAM 208
V GM+ F +A + + G+ ++ I + G+ ++ A +K+ A
Sbjct: 106 TVTGMIEVFDVMAITGTGSARSMASGVSKATIPTMAGMVGALSGVFASTYLQRKTKREAE 165
Query: 209 QMEGFA 214
+E
Sbjct: 166 LLEDQM 171
>gi|262274015|ref|ZP_06051827.1| ferric siderophore transport system biopolymer transport protein
ExbB [Grimontia hollisae CIP 101886]
gi|262221825|gb|EEY73138.1| ferric siderophore transport system biopolymer transport protein
ExbB [Grimontia hollisae CIP 101886]
Length = 235
Score = 66.4 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 19/111 (17%), Positives = 51/111 (45%), Gaps = 2/111 (1%)
Query: 114 DRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYS--NNVVS 171
+ + + + ++ + T L L + L+G+LG V+G++ F+ ++ +
Sbjct: 98 EEAVSIWLQKKRRQFTAGLKMLNIIGVLSPLIGLLGTVMGLIEMFKGLSATQGGISPAEL 157
Query: 172 IPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
G+ ++ + GL +++P+ + F + + ++E N F+ L+
Sbjct: 158 ADGLGLAMSTTAAGLLIALPAIASSQVFSLWADRTLAKIEYVLNHFNLHLA 208
>gi|56460957|ref|YP_156238.1| TonB system biopolymer transport component [Idiomarina loihiensis
L2TR]
gi|56179967|gb|AAV82689.1| TonB system biopolymer transport component [Idiomarina loihiensis
L2TR]
Length = 174
Score = 66.0 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 26/195 (13%), Positives = 62/195 (31%), Gaps = 43/195 (22%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLET 71
SI G + ++ +LF+ W ++I++ + R W +
Sbjct: 10 SIRDFLATGGDVLYIVMGVLFLM----WVLMIERYWYLTGAFPKLRNDIIAKWDAR---- 61
Query: 72 VCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEK 131
R+ + I+ +++ +
Sbjct: 62 ----------------------------------KDTTSWYAHRIREAWISEANDKLNAR 87
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSI 190
+ + + + LVG+LG V GM+ F+ +A + N + GI + I + G+ ++
Sbjct: 88 ILLIKTCVALCPLVGLLGTVTGMIAVFEIMAVQGTGNPRLMASGISMATIPTMAGMVAAL 147
Query: 191 PSSIAYNKFIEDSKK 205
+ ++
Sbjct: 148 SGMFFATRLESKVRR 162
>gi|320355204|ref|YP_004196543.1| outer membrane transport energization protein ExbB [Desulfobulbus
propionicus DSM 2032]
gi|320123706|gb|ADW19252.1| outer membrane transport energization protein ExbB [Desulfobulbus
propionicus DSM 2032]
Length = 143
Score = 66.0 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 29/101 (28%), Positives = 49/101 (48%), Gaps = 1/101 (0%)
Query: 112 RIDRMMDVAIARELE-EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
R R+ A + LE ++ KL + ++ + +G+LG VLG+M F I +
Sbjct: 35 RAVRVEQYADRKVLELHLSHKLHLIATIGANAPYIGLLGTVLGIMLTFYDIGAAGFDTTK 94
Query: 171 SIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
+ G+ +L + LGL V+IP+ YN + K MQ +
Sbjct: 95 IMTGLALALKATALGLLVAIPAVTLYNLLLRRCKVLLMQWD 135
>gi|153864579|ref|ZP_01997436.1| MotA/TolQ/ExbB proton channel family domain protein [Beggiatoa sp.
SS]
gi|152145927|gb|EDN72565.1| MotA/TolQ/ExbB proton channel family domain protein [Beggiatoa sp.
SS]
Length = 225
Score = 65.6 bits (159), Expect = 5e-09, Method: Composition-based stats.
Identities = 32/159 (20%), Positives = 71/159 (44%), Gaps = 18/159 (11%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS----GQSLETVCKSLKNHHN 81
II + + S+++ ++I ++ + + + + W G+ + L+NH
Sbjct: 10 LIIWPIILCSVIAMAIIGERFWSLQSQKVVPKGLVAQVWKWAKEGKLDKQRLARLRNHSP 69
Query: 82 IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSA 141
+GL I ++ + + D+ D + + A R + ++ + L+ LG+++
Sbjct: 70 LGL--ILVAGL--VNRYHDR---------DMMKDAIQEASNRVIHDLEKYLNTLGTIAEI 116
Query: 142 GLLVGILGAVLGMMGFFQSIAGYY-SNNVVSIPGIIESL 179
L+G+LG V+GM+ F +I N ++ G SL
Sbjct: 117 APLLGLLGTVMGMIRMFAAIGEVGLGNPMILSSGPFRSL 155
>gi|300309632|ref|YP_003773724.1| MotA/TolQ/ExbB proton channel family protein [Herbaspirillum
seropedicae SmR1]
gi|300072417|gb|ADJ61816.1| MotA/TolQ/ExbB proton channel family protein [Herbaspirillum
seropedicae SmR1]
Length = 208
Score = 65.6 bits (159), Expect = 5e-09, Method: Composition-based stats.
Identities = 33/172 (19%), Positives = 74/172 (43%), Gaps = 12/172 (6%)
Query: 41 VIIQKSVNFITLRRQFREFEQLFWSG-QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSC 99
VI+++ + F RQ E+ Q L+ + +L ++ LA + + +
Sbjct: 24 VIVERGLFFGYTMRQATGLERAMTHAVQHLKELPAALTARPSLPLALVSDILAEKHHLTT 83
Query: 100 DKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQ 159
+K + + E+ ++L L ++ +A L+G+LG +LG++ F+
Sbjct: 84 EKDLEDFS----------ESVYIAKRGEVQQRLWILDTIVTAAPLLGLLGTILGIIDTFK 133
Query: 160 SIAGYY-SNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQM 210
++A S+ GI +L + LG+ +++ +N F E ++ +
Sbjct: 134 ALAVSGVSDPGQVSQGIGTALYATALGIGIAVVGMFFFNLFQERIERINDHL 185
>gi|330962236|gb|EGH62496.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. maculicola
str. ES4326]
Length = 216
Score = 65.2 bits (158), Expect = 6e-09, Method: Composition-based stats.
Identities = 28/169 (16%), Positives = 73/169 (43%), Gaps = 12/169 (7%)
Query: 44 QKSVNFITLRRQFREFEQLF-WSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKG 102
++ + F +RRQ R + S S + + ++L ++ L + + +
Sbjct: 27 ERGIYFAYVRRQSRALQAALNASVHSEKDLPETLTRRTSLPLEMVLPVLAQKNAHGSRRD 86
Query: 103 ARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA 162
+++ ++ L + ++++A L+G+LG +LG++ F+++A
Sbjct: 87 LDD----------VIETQYLSTRAPLSRSLWLIETITTAAPLLGLLGTILGIIDTFKALA 136
Query: 163 GYY-SNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQM 210
S+ GI +L + LG+ +++ + +N F + ++ Q+
Sbjct: 137 SAGVSDPGQISAGIGTALFATGLGIAIALFCVVFHNYFQDSLERINDQL 185
>gi|56751686|ref|YP_172387.1| biopolymer transport ExbB-like protein [Synechococcus elongatus PCC
6301]
gi|56686645|dbj|BAD79867.1| biopolymer transport ExbB like protein [Synechococcus elongatus PCC
6301]
Length = 216
Score = 65.2 bits (158), Expect = 7e-09, Method: Composition-based stats.
Identities = 41/207 (19%), Positives = 79/207 (38%), Gaps = 21/207 (10%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
++I LF + GLA + L SIL+ I +++ + L +Q + +
Sbjct: 1 MNILTLFQKGGLA----MLPLTGLSILALGTIFERAWFWYALLKQESQIVHRVLDAADQD 56
Query: 71 -TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+ + + F++A + + ++ + EL +
Sbjct: 57 WDLAAEVASRAKNSPIGRFLAA----------PLQLQQPDPELFRLALEASAEEELANMR 106
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI---AGYYSNNVVSIPGIIESLISILLGL 186
L ++ + L+G+LG VLG++ ++ S+ GI E+LI+ GL
Sbjct: 107 RGDKLLEAVIAISPLLGLLGTVLGLIQTLGNLRIGDLGSSSTAGVSAGIGEALITTATGL 166
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGF 213
V+I + AY F QM+ F
Sbjct: 167 IVAIVALAAYRVFQ---GLIVQQMKVF 190
>gi|254413056|ref|ZP_05026828.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Microcoleus chthonoplastes PCC 7420]
gi|196180220|gb|EDX75212.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Microcoleus chthonoplastes PCC 7420]
Length = 317
Score = 65.2 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 43/200 (21%), Positives = 74/200 (37%), Gaps = 28/200 (14%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL- 69
+ I A+ + G+A + L SIL+ I ++ FW G L
Sbjct: 1 MDIVAIIEKGGIA----MWPLLGLSILAVGTIFERLW---------------FWGGILLK 41
Query: 70 -ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQ----DRIDRMMDVAIARE 124
E V + + AM ++ + +P+ + + ++ A E
Sbjct: 42 QEEVVNRVLDAATQNWQVAREIAMKSRRQPVGRYLYAPLRLISPEPELFRLALEGAADDE 101
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP---GIIESLIS 181
L + L ++ + L+G+LG VLG++ SI + GI E+LIS
Sbjct: 102 LATMRRGDKLLEAVIALSPLLGLLGTVLGLINSLGSITIDQLGTASTAGVTLGIGEALIS 161
Query: 182 ILLGLCVSIPSSIAYNKFIE 201
GL ++I S Y F
Sbjct: 162 TATGLIIAITSLAFYRLFQA 181
>gi|330965731|gb|EGH65991.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. actinidiae
str. M302091]
Length = 216
Score = 64.8 bits (157), Expect = 9e-09, Method: Composition-based stats.
Identities = 28/169 (16%), Positives = 73/169 (43%), Gaps = 12/169 (7%)
Query: 44 QKSVNFITLRRQFREFEQLF-WSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKG 102
++ + F +RRQ R + S S + + ++L ++ L + + +
Sbjct: 27 ERGIYFAYVRRQSRALQTALSASVHSEKDLPEALTRRTSLPLEMVLPVLAQKNAHGSRRD 86
Query: 103 ARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA 162
+++ ++ L + ++++A L+G+LG +LG++ F+++A
Sbjct: 87 LDD----------VIETQYLSTRAPLSRSLWLIETITTAAPLLGLLGTILGIIDTFKALA 136
Query: 163 GYY-SNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQM 210
S+ GI +L + LG+ +++ + +N F + ++ Q+
Sbjct: 137 SAGVSDPSQISAGIGTALFATGLGIAIALFCVVFHNYFQDSLERINDQL 185
>gi|330873397|gb|EGH07546.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv.
morsprunorum str. M302280PT]
Length = 216
Score = 64.8 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/169 (16%), Positives = 73/169 (43%), Gaps = 12/169 (7%)
Query: 44 QKSVNFITLRRQFREFEQLF-WSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKG 102
++ + F +RRQ R + S S + + ++L ++ L + + +
Sbjct: 27 ERGIYFAYVRRQSRALQTALSASVHSEKDLPEALTRRTSLPLEMVLPVLAQKNAHGSRRD 86
Query: 103 ARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA 162
+++ ++ L + ++++A L+G+LG +LG++ F+++A
Sbjct: 87 LDD----------VIETQYLSTRAPLSRSLWLIETITTAAPLLGLLGTILGIIDTFKALA 136
Query: 163 GYY-SNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQM 210
S+ GI +L + LG+ +++ + +N F + ++ Q+
Sbjct: 137 SAGVSDPGQISAGIGTALFATGLGIAIALFCVVFHNYFQDSLERINDQL 185
>gi|254467578|ref|ZP_05080987.1| MotA/TolQ/ExbB proton channel [Rhodobacterales bacterium Y4I]
gi|206684326|gb|EDZ44810.1| MotA/TolQ/ExbB proton channel [Rhodobacterales bacterium Y4I]
Length = 205
Score = 64.8 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 34/156 (21%), Positives = 63/156 (40%), Gaps = 14/156 (8%)
Query: 40 SVIIQKSVNFITLRRQFREFEQLF--WSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKK 97
+VI K + +R EQ W +S++ + + + +
Sbjct: 27 TVIAVKLIQLWPVRSGAAAREQALNLWRDGDRARAQQSIETDPSPAGRVMGYA-----MQ 81
Query: 98 SCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGF 157
+ G R P+ + + E+ + + L ++ L+G+LG VLGM+
Sbjct: 82 ALQDGLRGPLLQDE-----LQRRGNEEVSRMNSLIRLLELIAMVAPLLGLLGTVLGMIQS 136
Query: 158 FQSI--AGYYSNNVVSIPGIIESLISILLGLCVSIP 191
FQ + A +N V GI ++L++ GL V+IP
Sbjct: 137 FQELELAQGAANASVLAGGIWQALLTTAAGLLVAIP 172
>gi|81301238|ref|YP_401446.1| biopolymer transport ExbB like protein [Synechococcus elongatus PCC
7942]
gi|81170119|gb|ABB58459.1| biopolymer transport ExbB like protein [Synechococcus elongatus PCC
7942]
Length = 216
Score = 64.4 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 41/207 (19%), Positives = 79/207 (38%), Gaps = 21/207 (10%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
++I LF + GLA + L SIL+ I +++ + L +Q + +
Sbjct: 1 MNILTLFQKGGLA----MLPLTGLSILALGTIFERAWFWYALLKQESQIVHRVLDAADQD 56
Query: 71 -TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+ + + F++A + + ++ + EL +
Sbjct: 57 WDLAAEVASRAKNSPIGRFLAA----------PLQLQQPDPELFRLALEASAEEELANMR 106
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI---AGYYSNNVVSIPGIIESLISILLGL 186
L ++ + L+G+LG VLG++ ++ S+ GI E+LI+ GL
Sbjct: 107 RGDKLLEAVIAISPLLGLLGTVLGLIQTLGNLRIGDLGSSSTAGVSAGIGEALITTATGL 166
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGF 213
V+I + AY F QM+ F
Sbjct: 167 IVAIVALAAYRVFQ---GLIVQQMKVF 190
>gi|213967300|ref|ZP_03395449.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. tomato T1]
gi|301383065|ref|ZP_07231483.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. tomato
Max13]
gi|302060336|ref|ZP_07251877.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. tomato K40]
gi|302130903|ref|ZP_07256893.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. tomato
NCPPB 1108]
gi|213928142|gb|EEB61688.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. tomato T1]
Length = 216
Score = 64.4 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/169 (16%), Positives = 73/169 (43%), Gaps = 12/169 (7%)
Query: 44 QKSVNFITLRRQFREFEQLF-WSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKG 102
++ + F +RRQ R + S S + + ++L ++ L + + +
Sbjct: 27 ERGIYFAYVRRQSRALQTALSASVHSEKDLPETLTRRTSLPLEMVLPVLAQKNAHGSRRD 86
Query: 103 ARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA 162
+++ ++ L + ++++A L+G+LG +LG++ F+++A
Sbjct: 87 LDD----------VIETQYLSTRAPLSRSLWLIETITTAAPLLGLLGTILGIIDTFKALA 136
Query: 163 GYY-SNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQM 210
S+ GI +L + LG+ +++ + +N F + ++ Q+
Sbjct: 137 SAGVSDPGQISAGIGTALFATGLGIAIALFCVVFHNYFQDSLERINDQL 185
>gi|330975502|gb|EGH75568.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. aptata str.
DSM 50252]
Length = 216
Score = 64.4 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/169 (16%), Positives = 73/169 (43%), Gaps = 12/169 (7%)
Query: 44 QKSVNFITLRRQFREFEQLF-WSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKG 102
++ + F +RRQ R + S S + + ++L ++ L + + + +
Sbjct: 27 ERGIYFAYVRRQSRALQTALGASVHSEKDLPETLTRRTSLPLEMVLPVLAQKNAQGSRRD 86
Query: 103 ARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA 162
+++ + L + ++++A L+G+LG +LG++ F+++A
Sbjct: 87 LDD----------VIETQYLSTRAPLARSLWLIETITTAAPLLGLLGTILGIIDTFKALA 136
Query: 163 GYY-SNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQM 210
S+ GI +L + LG+ +++ + +N F + ++ Q+
Sbjct: 137 SAGVSDPGQISAGIGTALFATGLGIAIALFCVVFHNYFQDSLERINDQL 185
>gi|302345162|ref|YP_003813515.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Prevotella melaninogenica ATCC 25845]
gi|302150214|gb|ADK96476.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Prevotella melaninogenica ATCC 25845]
Length = 279
Score = 64.4 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 40/210 (19%), Positives = 89/210 (42%), Gaps = 19/210 (9%)
Query: 13 IFALFMQMGLAVKCIITLLF---IFSILSWSVIIQKSVNFITL--RRQFREFEQLFWSGQ 67
++ + G+ V I TLL SI ++ + T + +F S
Sbjct: 60 VWGTIFKGGVVVPVIHTLLLTVLAMSI-------ERWMALKTAFGKGALPKFVANIKSAL 112
Query: 68 SLETVCKS--LKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDR---MMDVAIA 122
+ + K+ L + +A + ++++ +K + GA + + ++ + + A
Sbjct: 113 NANDLAKANQLCDQQKGSVANVVKASLNAYKDM-ETGANANLKKAQKVAKIQQAHEEATQ 171
Query: 123 RELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLIS 181
E+ +T L + ++ + G L G+LG V GM+ F ++A + ++ GI E+LI+
Sbjct: 172 LEMPTLTMNLPIIATLVTLGTLTGLLGTVTGMIKSFSALAAGGGADSAALSAGISEALIN 231
Query: 182 ILLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
G+ S + ++Y + K ++
Sbjct: 232 TAFGIATSWCAVVSYGYYSNKVDKLTFALD 261
>gi|254489184|ref|ZP_05102388.1| MotA/TolQ/ExbB proton channel [Roseobacter sp. GAI101]
gi|214042192|gb|EEB82831.1| MotA/TolQ/ExbB proton channel [Roseobacter sp. GAI101]
Length = 208
Score = 64.4 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 31/196 (15%), Positives = 69/196 (35%), Gaps = 19/196 (9%)
Query: 41 VIIQKSVNFITL----RRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWK 96
+ + K+ F + R Q + W ++ ++ L+ I + S
Sbjct: 25 IGLYKTGQFARMGVGKRNQAEKILDD-WLNGRVDDAISEAGKRKSV-LSRILQAVFS--- 79
Query: 97 KSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMG 156
G ++ + + EL ++E++ L + A ++G+LG V+GM+
Sbjct: 80 -----GIQARPTDVSYAEELSRQTAMIELATMSERMRALDMVVQAAPMLGLLGTVVGMID 134
Query: 157 FFQSIAGYYSN--NVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFA 214
F +A GI +L + GL +++ + + +E
Sbjct: 135 AFSVLAVTEGAVDPTTLAGGIYVALTTTAAGLVLALFAFFLATWLEGRIDRERNMIEALM 194
Query: 215 NEFSAILSRQTEGNIS 230
SA + + + N +
Sbjct: 195 ---SAAIHGRVDPNAA 207
>gi|296444781|ref|ZP_06886744.1| tonB-system energizer ExbB [Methylosinus trichosporium OB3b]
gi|296257729|gb|EFH04793.1| tonB-system energizer ExbB [Methylosinus trichosporium OB3b]
Length = 142
Score = 64.4 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 19/85 (22%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV-SIPGIIESLISILLGL 186
+T+++ + +++ +G+LG VLG+M F ++ + + + + +L + GL
Sbjct: 54 LTKRIFIVALVAANAPYIGLLGTVLGIMLTFYTMGVDGTADASRIMSSLGLALKATAAGL 113
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQME 211
V++ S AYN K ++ E
Sbjct: 114 VVALVSVTAYNTLQRHIKVLTLRWE 138
>gi|256823157|ref|YP_003147120.1| MotA/TolQ/ExbB proton channel [Kangiella koreensis DSM 16069]
gi|256796696|gb|ACV27352.1| MotA/TolQ/ExbB proton channel [Kangiella koreensis DSM 16069]
Length = 170
Score = 64.1 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/202 (14%), Positives = 70/202 (34%), Gaps = 43/202 (21%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLET 71
+I + G + I +LF+ W++II++
Sbjct: 6 TILGFINKGGWVLWWIGLVLFLM----WTLIIERYWYIY--------------------- 40
Query: 72 VCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEK 131
I E KS R+ + ++ E + ++
Sbjct: 41 -----GQFPKEARMMIAQWNAREDTKSWQAH------------RIRETWVSIAREALNQR 83
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSI 190
+ + ++ + L+G+LG V GM+ F+S++G S + GI ++ I + G+ ++
Sbjct: 84 MLLIKTLIAICPLLGLLGTVTGMIDVFESMSGQGSGSARQMAGGIFKATIPTMAGMVSAL 143
Query: 191 PSSIAYNKFIEDSKKFAMQMEG 212
++ + + + Q+
Sbjct: 144 SGIFFSSRLEQTAYMKSHQLAD 165
>gi|77360132|ref|YP_339707.1| TonB system transport protein ExbB2 [Pseudoalteromonas haloplanktis
TAC125]
gi|76875043|emb|CAI86264.1| TonB system transport protein ExbB2 [Pseudoalteromonas haloplanktis
TAC125]
Length = 174
Score = 64.1 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 21/124 (16%), Positives = 56/124 (45%), Gaps = 5/124 (4%)
Query: 92 MSEWKKSCDKGARSPIGIQD----RIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGI 147
++E+ + + QD R+ + I+ E++ +++ + ++ + L+G+
Sbjct: 44 LAEFPRLSQEIIAKWDARQDTTSWYAHRIREAWISEASEKLDQRMLLIKTLVAVCPLIGL 103
Query: 148 LGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKF 206
LG V GM+ F+++A + N + GI + I + G+ ++ ++ +K
Sbjct: 104 LGTVTGMISVFETMASQGTGNARLMASGISMATIPTMAGMVAALSGVFFSSRLETKAKMV 163
Query: 207 AMQM 210
++
Sbjct: 164 KAKL 167
>gi|330881259|gb|EGH15408.1| biopolymer transport protein ExbB [Pseudomonas syringae pv.
glycinea str. race 4]
Length = 76
Score = 64.1 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 20/71 (28%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 21 GLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHH 80
+ V ++ L +FS+LSW++++ KS ++ + Q ++F + FWS L T + +
Sbjct: 7 SMIVPAVLWALILFSVLSWALLLIKSAQYVRQKSQNKQFTKAFWSAPDLLTAAEHSAQYP 66
Query: 81 NIGLAAIFMSA 91
LA I S
Sbjct: 67 G-ALARIANSG 76
>gi|258545684|ref|ZP_05705918.1| TonB-system energizer ExbB [Cardiobacterium hominis ATCC 15826]
gi|258519054|gb|EEV87913.1| TonB-system energizer ExbB [Cardiobacterium hominis ATCC 15826]
Length = 145
Score = 64.1 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 20/79 (25%), Positives = 37/79 (46%), Gaps = 2/79 (2%)
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSN--NVVSIPGIIESLISILLG 185
+ L+ + ++ S VG+LG V G++ F + + N + G+ +L + LG
Sbjct: 52 LERNLTPIYTIGSNAPYVGLLGTVTGILITFYDMGQHGGNIDAAQIMVGLALALKATALG 111
Query: 186 LCVSIPSSIAYNKFIEDSK 204
+ V+IPS + YN
Sbjct: 112 ILVAIPSIMFYNMLSRKVD 130
>gi|66044132|ref|YP_233973.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. syringae
B728a]
gi|63254839|gb|AAY35935.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. syringae
B728a]
gi|330972734|gb|EGH72800.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. aceris str.
M302273PT]
Length = 216
Score = 64.1 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/169 (16%), Positives = 73/169 (43%), Gaps = 12/169 (7%)
Query: 44 QKSVNFITLRRQFREFEQLF-WSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKG 102
++ + F +RRQ R + S S + + ++L ++ L + + + +
Sbjct: 27 ERGIYFAYVRRQSRALQTALGASVHSEKDLPETLTRRTSLPLEMVLPVLAQKNAQGSRRD 86
Query: 103 ARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA 162
+++ + L + ++++A L+G+LG +LG++ F+++A
Sbjct: 87 LDD----------VIETQYLSTRAPLARSLWLIETITTAAPLLGLLGTILGIIDTFKALA 136
Query: 163 GYY-SNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQM 210
S+ GI +L + LG+ +++ + +N F + ++ Q+
Sbjct: 137 SAGVSDPGQISAGIGTALFATGLGIAIALFCVVFHNYFQDSLERINDQL 185
>gi|308048948|ref|YP_003912514.1| MotA/TolQ/ExbB proton channel [Ferrimonas balearica DSM 9799]
gi|307631138|gb|ADN75440.1| MotA/TolQ/ExbB proton channel [Ferrimonas balearica DSM 9799]
Length = 217
Score = 64.1 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 25/171 (14%), Positives = 65/171 (38%), Gaps = 15/171 (8%)
Query: 26 CII-TLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGL 84
++ L + S+ +++Q+++ + FW G+ K L H L
Sbjct: 11 GVMTWPLLLCSVFGLVLLLQRALALMV----------HFWPGRH--GWLKHLPLHDAGTL 58
Query: 85 AAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLL 144
+ + +D + ++ + + L L ++ L
Sbjct: 59 KTSVAQRRGLAAEGIALLLKHQSASKDDREALLSLWLTAARRRANTNLRLLTAVGVIAPL 118
Query: 145 VGILGAVLGMMGFFQSIAGYY--SNNVVSIPGIIESLISILLGLCVSIPSS 193
+G+LG V+G++ F+++A + + G+ ++ + GL +++P+
Sbjct: 119 LGLLGTVIGLITMFETLANSGGPATPAMLAEGLGLAMGTTAAGLAIALPAI 169
>gi|317487046|ref|ZP_07945854.1| MotA/TolQ/ExbB proton channel family protein [Bilophila wadsworthia
3_1_6]
gi|316921728|gb|EFV43006.1| MotA/TolQ/ExbB proton channel family protein [Bilophila wadsworthia
3_1_6]
Length = 212
Score = 64.1 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/107 (30%), Positives = 57/107 (53%), Gaps = 1/107 (0%)
Query: 104 RSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA- 162
++ G + I + R E++T+ L +L +S L+G+LG +LGM+ F++IA
Sbjct: 77 KTHGGHSEDIRAEVAYLFHRNFEQVTKGLCWLRLISVVSPLLGLLGTILGMVTVFRTIAE 136
Query: 163 GYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQ 209
N GI E+LI+ ++GLCV+IP + Y + K F ++
Sbjct: 137 NSAPNAAQLAAGIWEALITTIMGLCVAIPMLMFYYYLMLKFKGFHIE 183
>gi|75908679|ref|YP_322975.1| MotA/TolQ/ExbB proton channel [Anabaena variabilis ATCC 29413]
gi|75702404|gb|ABA22080.1| outer membrane transport energization protein ExbB [Anabaena
variabilis ATCC 29413]
Length = 213
Score = 64.1 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 38/204 (18%), Positives = 83/204 (40%), Gaps = 21/204 (10%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+ I LF G+ ++ L FS+L+ ++II++ ++ + + + L+
Sbjct: 1 MGILNLFTAGGV----VMWPLLAFSLLAVALIIERISFWVRISGKQNRIVREVLRLYQLD 56
Query: 71 TVC---KSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
V ++L+ + ++ +A IF++A + ++ E+
Sbjct: 57 NVVSTLEALRQNVDLPIARIFLAA-----------LELEEPTPEEFRLALESEAQAEIPV 105
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGY---YSNNVVSIPGIIESLISILL 184
+ + ++ L+G+LG VLG++ F S+ + GI E+L+S
Sbjct: 106 LKRFQNIFDTIIGLAPLLGLLGTVLGLINSFASLNIGDVGGTKTAGVTAGISEALVSTAS 165
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAM 208
GL V+I + N F ++
Sbjct: 166 GLVVAIFTLFFANSFRGLYQRQIA 189
>gi|298491744|ref|YP_003721921.1| MotA/TolQ/ExbB proton channel ['Nostoc azollae' 0708]
gi|298233662|gb|ADI64798.1| MotA/TolQ/ExbB proton channel ['Nostoc azollae' 0708]
Length = 210
Score = 64.1 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 39/222 (17%), Positives = 87/222 (39%), Gaps = 21/222 (9%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQK---SVNFITLRRQFREFEQLFWSGQ 67
+ I LF G+ ++ L FS+L +I+++ + + + F+
Sbjct: 1 MDISNLFQAGGV----VMFPLLFFSVLGVGLIMERITFWIKLTGRQNRVVREVLNFYRQN 56
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
++ + +L+ + ++ +A IF++A + ++ E+
Sbjct: 57 NVVSALDNLQKNSDLPIARIFLAA-----------LELEEPTPEEFRLALESEAQAEIPL 105
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGY---YSNNVVSIPGIIESLISILL 184
+ + ++ L+G+LG VLG++ F S+ + GI E+L+S
Sbjct: 106 LKRFQNIFDTIIGLAPLLGLLGTVLGLIASFASLDISDVGRTKTSGVTSGISEALVSTAS 165
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
GL V+I + N F + ++ + + + RQ E
Sbjct: 166 GLVVAIITLFFANTFRGLYLRQIAWIQEYGGQLELLYRRQYE 207
>gi|70728375|ref|YP_258124.1| MotA/TolQ/ExbB proton channel family protein [Pseudomonas
fluorescens Pf-5]
gi|68342674|gb|AAY90280.1| MotA/TolQ/ExbB proton channel family protein [Pseudomonas
fluorescens Pf-5]
Length = 214
Score = 64.1 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 31/170 (18%), Positives = 74/170 (43%), Gaps = 12/170 (7%)
Query: 43 IQKSVNFITLRRQFREFEQLFW-SGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDK 101
+++ + F RQ ++ E + S++ + L+ +++ L + A K
Sbjct: 26 VERGIYFSFSLRQAKKLETVLNPKMHSVDDLPAPLRERNSLPLEMV---AELFAHKQGLA 82
Query: 102 GARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI 161
+ + + I ++ L L ++ +A L+G+LG +LG++ F+++
Sbjct: 83 SHKDLEDLSESIYIATR-------SKLMHGLWLLETVVTAAPLLGLLGTILGIIDTFKAL 135
Query: 162 AGYY-SNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQM 210
A S+ GI +L + LG+ +++ S I +N F + ++ +
Sbjct: 136 AETGVSDPGEVSKGIGTALYATALGIAIALGSMIFHNHFQDRVERITDHL 185
>gi|289678502|ref|ZP_06499392.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. syringae
FF5]
Length = 216
Score = 63.7 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/169 (16%), Positives = 72/169 (42%), Gaps = 12/169 (7%)
Query: 44 QKSVNFITLRRQFREFEQLF-WSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKG 102
++ + F +RRQ R + S S + + ++L ++ L + + +
Sbjct: 27 ERGIYFAYVRRQSRALQTALGASVHSEKDLPETLTRRTSLPLEMVLPVLAQKNAHGSRRD 86
Query: 103 ARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA 162
+++ + L + ++++A L+G+LG +LG++ F+++A
Sbjct: 87 LDD----------VIETQYLSTRAPLARSLWLIETITTAAPLLGLLGTILGIIDTFKALA 136
Query: 163 GYY-SNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQM 210
S+ GI +L + LG+ +++ + +N F + ++ Q+
Sbjct: 137 SAGVSDPGQISAGIGTALFATGLGIAIALFCVVFHNYFQDSLERINDQL 185
>gi|288802963|ref|ZP_06408399.1| MotA/TolQ/ExbB proton channel family protein [Prevotella
melaninogenica D18]
gi|288334480|gb|EFC72919.1| MotA/TolQ/ExbB proton channel family protein [Prevotella
melaninogenica D18]
Length = 279
Score = 63.7 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 40/210 (19%), Positives = 89/210 (42%), Gaps = 19/210 (9%)
Query: 13 IFALFMQMGLAVKCIITLLF---IFSILSWSVIIQKSVNFITL--RRQFREFEQLFWSGQ 67
++ + G+ V I TLL SI ++ + T + +F S
Sbjct: 60 VWGTIFKGGVVVPVIHTLLLTVLAMSI-------ERWMALKTAFGKGALPKFVANIKSAL 112
Query: 68 SLETVCKS--LKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDR---MMDVAIA 122
+ + K+ L + +A + ++++ +K + GA + + ++ + + A
Sbjct: 113 NANDLAKANQLCDQQKGSVANVVKASLNAYKDM-ETGANANLKKAQKVAKIQQAHEEATQ 171
Query: 123 RELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLIS 181
E+ +T L + ++ + G L G+LG V GM+ F ++A + ++ GI E+LI+
Sbjct: 172 LEMPTLTMNLPIIATLVTLGTLTGLLGTVTGMIKSFSALAAGGGADSAALSAGISEALIN 231
Query: 182 ILLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
G+ S + ++Y + K ++
Sbjct: 232 TAFGIATSWCAVVSYGYYSNKVDKLTFALD 261
>gi|91204006|emb|CAJ71659.1| conserved hypothetical protein [Candidatus Kuenenia
stuttgartiensis]
Length = 218
Score = 63.7 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 22/105 (20%), Positives = 43/105 (40%), Gaps = 3/105 (2%)
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA---GYYSNNVVSIPGIIESLI 180
E+ + L + L+G+LG V GM+ F ++A G + GI E+LI
Sbjct: 110 EIAPLGRDLLVMRICIGVSPLLGLLGTVTGMLTTFSALATGSGGEKTMGLVAQGISEALI 169
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+ GL +++P +++ + F+ L ++
Sbjct: 170 TTETGLVLALPGLFFQYHLSRQYERYKSFLAHLETIFTQKLYKKL 214
>gi|330951171|gb|EGH51431.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae Cit 7]
Length = 216
Score = 63.7 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/169 (16%), Positives = 73/169 (43%), Gaps = 12/169 (7%)
Query: 44 QKSVNFITLRRQFREFEQLF-WSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKG 102
++ + F +RRQ R + S S + + ++L ++ L + + + +
Sbjct: 27 ERGIYFAYVRRQSRALQTALGASVHSEKDLPETLTRRTSLPLEMVLPVLAQKNAQGSRRD 86
Query: 103 ARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA 162
+++ + L + ++++A L+G+LG +LG++ F+++A
Sbjct: 87 LDD----------VIETQYLSTRAPLARSLWLIETITTAAPLLGLLGTILGIIDTFKALA 136
Query: 163 GYY-SNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQM 210
S+ GI +L + LG+ +++ + +N F + ++ Q+
Sbjct: 137 SAGVSDPGQISAGIGTALFATGLGIAIALFCVVFHNYFQDSLERINDQL 185
>gi|332534953|ref|ZP_08410772.1| ferric siderophore transport system, biopolymer transport protein
ExbB [Pseudoalteromonas haloplanktis ANT/505]
gi|332035626|gb|EGI72117.1| ferric siderophore transport system, biopolymer transport protein
ExbB [Pseudoalteromonas haloplanktis ANT/505]
Length = 174
Score = 63.7 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 26/200 (13%), Positives = 67/200 (33%), Gaps = 43/200 (21%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLET 71
SI G + + LF+ W ++I++ + + + W +
Sbjct: 10 SIRDFVGTGGQVLYVVAIALFLM----WVLMIERYWFLLAEFPRTAKEIVAKWDAR---- 61
Query: 72 VCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEK 131
R+ + I+ E++ ++
Sbjct: 62 ----------------------------------QDTTSWYAHRIREAWISEASEKLDQR 87
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSI 190
+ + ++ + L+G+LG V GM+ F+++A + N + GI + I + G+ ++
Sbjct: 88 MLLIKTLVAVCPLIGLLGTVTGMISVFETMANQGTGNARLMASGISMATIPTMAGMVAAL 147
Query: 191 PSSIAYNKFIEDSKKFAMQM 210
++ +K ++
Sbjct: 148 SGVFFSSRLETKAKMVKAKL 167
>gi|109899295|ref|YP_662550.1| MotA/TolQ/ExbB proton channel [Pseudoalteromonas atlantica T6c]
gi|109701576|gb|ABG41496.1| outer membrane transport energization protein ExbB
[Pseudoalteromonas atlantica T6c]
Length = 174
Score = 63.7 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 27/200 (13%), Positives = 70/200 (35%), Gaps = 43/200 (21%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLET 71
S+ G + + LF+ W ++I++ ++ + R+ W +
Sbjct: 10 SVRDFIAAGGDVLYVVALALFLM----WVLMIERYWYLASVFPKMRKEIVSNWDARE--- 62
Query: 72 VCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEK 131
R+ D I++ + ++ +
Sbjct: 63 -----------------------------------DTTSWYAHRIRDAWISQASDGLSAR 87
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSI 190
+ + ++ + L+G+LG V GM+G F+++A ++N + GI + I + G+ ++
Sbjct: 88 MLLIKTLVAMCPLIGLLGTVTGMIGVFETMATQGTSNPRLMAAGISMATIPTMAGMVAAL 147
Query: 191 PSSIAYNKFIEDSKKFAMQM 210
++ K ++
Sbjct: 148 SGVFFSSRLEAKVKMAKEKL 167
>gi|289626851|ref|ZP_06459805.1| MotA/TolQ/ExbB proton channel family protein [Pseudomonas syringae
pv. aesculi str. NCPPB3681]
gi|330869311|gb|EGH04020.1| MotA/TolQ/ExbB proton channel family protein [Pseudomonas syringae
pv. aesculi str. 0893_23]
Length = 216
Score = 63.7 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/169 (16%), Positives = 73/169 (43%), Gaps = 12/169 (7%)
Query: 44 QKSVNFITLRRQFREFEQLF-WSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKG 102
++ + F +RRQ R + S S + + ++L + L+ + + + +
Sbjct: 27 ERGIYFAYVRRQARALQTALSASVHSEKDLPEALTRRAGLPLSMVLPVLAQKNAQGSRRD 86
Query: 103 ARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA 162
+++ + L + ++++A L+G+LG +LG++ F+++A
Sbjct: 87 LDD----------VIETQYLSTRAPLARSLWLIETITTAAPLLGLLGTILGIIDTFKALA 136
Query: 163 GYY-SNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQM 210
S+ GI +L + LG+ +++ + +N F + ++ Q+
Sbjct: 137 SAGVSDPGQISAGIGTALFATGLGIAIALFCVVFHNYFQDSLERINDQL 185
>gi|119469533|ref|ZP_01612437.1| TonB system transport protein ExbB2 [Alteromonadales bacterium
TW-7]
gi|119447068|gb|EAW28338.1| TonB system transport protein ExbB2 [Alteromonadales bacterium
TW-7]
Length = 143
Score = 63.7 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 20/124 (16%), Positives = 55/124 (44%), Gaps = 5/124 (4%)
Query: 92 MSEWKKSCDKGARSPIGIQD----RIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGI 147
++E+ + QD R+ + I+ E++ +++ + ++ + L+G+
Sbjct: 13 LAEFPRLTKDIVAKWDARQDTTSWYAHRIREAWISEASEKLDQRMLLIKTLVAVCPLIGL 72
Query: 148 LGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKF 206
LG V GM+ F+++A + N + GI + I + G+ ++ ++ ++
Sbjct: 73 LGTVTGMIAVFETMATQGTGNARLMASGISMATIPTMAGMVAALSGVFFSSRLEARARMV 132
Query: 207 AMQM 210
++
Sbjct: 133 KAKL 136
>gi|298485607|ref|ZP_07003687.1| MotA/TolQ/ExbB proton channel family protein [Pseudomonas
savastanoi pv. savastanoi NCPPB 3335]
gi|298159850|gb|EFI00891.1| MotA/TolQ/ExbB proton channel family protein [Pseudomonas
savastanoi pv. savastanoi NCPPB 3335]
Length = 216
Score = 63.7 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/169 (16%), Positives = 73/169 (43%), Gaps = 12/169 (7%)
Query: 44 QKSVNFITLRRQFREFEQLF-WSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKG 102
++ + F +RRQ R + S S + + ++L + L+ + + + +
Sbjct: 27 ERGIYFAYVRRQARALQTALSASVNSEKDLPEALTRRAGLPLSMVLPVLAQKNAQGSRRD 86
Query: 103 ARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA 162
+++ + L + ++++A L+G+LG +LG++ F+++A
Sbjct: 87 LDD----------VIETQYLSTRAPLARSLWLIETITTAAPLLGLLGTILGIIDTFKALA 136
Query: 163 GYY-SNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQM 210
S+ GI +L + LG+ +++ + +N F + ++ Q+
Sbjct: 137 SAGVSDPGQISAGIGTALFATGLGIAIALFCVVFHNYFQDSLERINDQL 185
>gi|302186498|ref|ZP_07263171.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. syringae
642]
Length = 216
Score = 63.7 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/169 (16%), Positives = 72/169 (42%), Gaps = 12/169 (7%)
Query: 44 QKSVNFITLRRQFREFEQLF-WSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKG 102
++ + F +RRQ R + S S + + ++L ++ L + + +
Sbjct: 27 ERGIYFAYVRRQSRALQTALGASVHSEKDLPETLTRRTSLPLEMVLPVLAQKNAHGSRRD 86
Query: 103 ARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA 162
+++ + L + ++++A L+G+LG +LG++ F+++A
Sbjct: 87 LDD----------VIETQYLSTRAPLARSLWLIETITTAAPLLGLLGTILGIIDTFKALA 136
Query: 163 GYY-SNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQM 210
S+ GI +L + LG+ +++ + +N F + ++ Q+
Sbjct: 137 SAGVSDPGQISAGIGTALFATGLGIAIALFCVVFHNYFQDSLERINDQL 185
>gi|329895888|ref|ZP_08271216.1| Ferric siderophore transport system, biopolymer transport protein
ExbB [gamma proteobacterium IMCC3088]
gi|328922106|gb|EGG29465.1| Ferric siderophore transport system, biopolymer transport protein
ExbB [gamma proteobacterium IMCC3088]
Length = 173
Score = 63.7 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 35/202 (17%), Positives = 73/202 (36%), Gaps = 43/202 (21%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLET 71
+I A + G + I L+F+ W++I ++ F R R W +
Sbjct: 8 TILAFMDKGGDVLWLIAILVFVM----WTLIFERFWFFTFAWRAERRLLIDKWESR---- 59
Query: 72 VCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEK 131
++ + + I+ R+ +++ E I
Sbjct: 60 ---------------------------AERKSWNAKQIRSRL-------VSQSREVINNN 85
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIE-SLISILLGLCVSI 190
+S + +M + L+G+LG V GM+ F +A + S+ G +E S I + G+ ++
Sbjct: 86 MSVITTMVALCPLLGLLGTVTGMIEVFNVMAVTGGGDAKSMAGGVERSTIPTMAGMVAAL 145
Query: 191 PSSIAYNKFIEDSKKFAMQMEG 212
A +++ +E
Sbjct: 146 SGLFANTYLQRIAEREQESLED 167
>gi|257481948|ref|ZP_05635989.1| MotA/TolQ/ExbB proton channel family protein [Pseudomonas syringae
pv. tabaci ATCC 11528]
gi|331008808|gb|EGH88864.1| MotA/TolQ/ExbB proton channel family protein [Pseudomonas syringae
pv. tabaci ATCC 11528]
Length = 216
Score = 63.7 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/169 (16%), Positives = 73/169 (43%), Gaps = 12/169 (7%)
Query: 44 QKSVNFITLRRQFREFEQLF-WSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKG 102
++ + F +RRQ R + S S + + ++L + L+ + + + +
Sbjct: 27 ERGIYFAYVRRQARALQTALSASVHSEKDLPEALTRRAGLPLSMVLPVLAQKNAQGSRRD 86
Query: 103 ARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA 162
+++ + L + ++++A L+G+LG +LG++ F+++A
Sbjct: 87 LDD----------VIETQYLSTRAPLARSLWLIETITTAAPLLGLLGTILGIIDTFKALA 136
Query: 163 GYY-SNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQM 210
S+ GI +L + LG+ +++ + +N F + ++ Q+
Sbjct: 137 SAGVSDPGQISAGIGTALFATGLGIAIALFCVVFHNYFQDSLERINDQL 185
>gi|71736395|ref|YP_273190.1| MotA/TolQ/ExbB proton channel family protein [Pseudomonas syringae
pv. phaseolicola 1448A]
gi|71556948|gb|AAZ36159.1| MotA/TolQ/ExbB proton channel family protein [Pseudomonas syringae
pv. phaseolicola 1448A]
gi|320325966|gb|EFW82025.1| MotA/TolQ/ExbB proton channel family protein [Pseudomonas syringae
pv. glycinea str. B076]
gi|320330357|gb|EFW86337.1| MotA/TolQ/ExbB proton channel family protein [Pseudomonas syringae
pv. glycinea str. race 4]
gi|330873287|gb|EGH07436.1| MotA/TolQ/ExbB proton channel family protein [Pseudomonas syringae
pv. glycinea str. race 4]
Length = 216
Score = 63.7 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/169 (16%), Positives = 73/169 (43%), Gaps = 12/169 (7%)
Query: 44 QKSVNFITLRRQFREFEQLF-WSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKG 102
++ + F +RRQ R + S S + + ++L + L+ + + + +
Sbjct: 27 ERGIYFAYVRRQARALQTALSASVHSEKDLPEALTRRAGLPLSMVLPVLAQKNAQGSRRD 86
Query: 103 ARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA 162
+++ + L + ++++A L+G+LG +LG++ F+++A
Sbjct: 87 LDD----------VIETQYLSTRAPLARSLWLIETITTAAPLLGLLGTILGIIDTFKALA 136
Query: 163 GYY-SNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQM 210
S+ GI +L + LG+ +++ + +N F + ++ Q+
Sbjct: 137 SAGVSDPGQISAGIGTALFATGLGIAIALFCVVFHNYFQDSLERINDQL 185
>gi|289675556|ref|ZP_06496446.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. syringae
FF5]
Length = 69
Score = 63.7 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 15/50 (30%), Positives = 27/50 (54%)
Query: 176 IESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
E+L++ +G+ V++P+ +AYN F K +E FA +F + R
Sbjct: 1 GEALVATGVGIAVAVPAVLAYNFFGRRLKLVIADLEEFAVDFLNLSQRNA 50
>gi|332305719|ref|YP_004433570.1| MotA/TolQ/ExbB proton channel [Glaciecola agarilytica 4H-3-7+YE-5]
gi|332173048|gb|AEE22302.1| MotA/TolQ/ExbB proton channel [Glaciecola agarilytica 4H-3-7+YE-5]
Length = 174
Score = 63.3 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 27/200 (13%), Positives = 70/200 (35%), Gaps = 43/200 (21%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLET 71
S+ G + + LF+ W ++I++ ++ + R+ W +
Sbjct: 10 SVRDFIAAGGDVLYVVALALFLM----WVLMIERYWYLTSVFPKMRKDIVSKWDARE--- 62
Query: 72 VCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEK 131
R+ D I++ + ++ +
Sbjct: 63 -----------------------------------DTTSWYAHRIRDAWISQASDGLSAR 87
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSI 190
+ + ++ + L+G+LG V GM+G F+++A ++N + GI + I + G+ ++
Sbjct: 88 MLLIKTLVAMCPLIGLLGTVTGMIGVFETMATQGTSNPRLMAAGISMATIPTMAGMVAAL 147
Query: 191 PSSIAYNKFIEDSKKFAMQM 210
++ K ++
Sbjct: 148 SGVFFSSRLEARVKMAKEKL 167
>gi|84516787|ref|ZP_01004145.1| MotA/TolQ/ExbB proton channel family protein [Loktanella
vestfoldensis SKA53]
gi|84509255|gb|EAQ05714.1| MotA/TolQ/ExbB proton channel family protein [Loktanella
vestfoldensis SKA53]
Length = 207
Score = 63.3 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 42/182 (23%), Positives = 72/182 (39%), Gaps = 20/182 (10%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLR--RQFREFEQLFWSGQSLETVCKSLKNHHNIG 83
++ L+ S+LS +V++ K F T R L S + +L
Sbjct: 20 WVVALIIALSVLSGAVVLWKLAQFYTAGVGRHAPLLAALAASDAGQQARALALAEAAPSH 79
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
LA + A+ +D DR+ +A AR L + L ++
Sbjct: 80 LAPVLALALQA---------------RDARDRLYTLAEAR-LARLEAGFRLLDGVAQTAP 123
Query: 144 LVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIE 201
L+G+ G VLGM+ F+++ AG + V GI +L++ GL V++P S +
Sbjct: 124 LLGLFGTVLGMIAAFRAMQDAGQSVDPSVLAGGIWVALMTTAAGLAVAMPLSAILSWLEG 183
Query: 202 DS 203
Sbjct: 184 RM 185
>gi|254284230|ref|ZP_04959198.1| lipid A export ATP-binding/permease protein MsbA [gamma
proteobacterium NOR51-B]
gi|219680433|gb|EED36782.1| lipid A export ATP-binding/permease protein MsbA [gamma
proteobacterium NOR51-B]
Length = 172
Score = 63.3 bits (153), Expect = 3e-08, Method: Composition-based stats.
Identities = 34/201 (16%), Positives = 73/201 (36%), Gaps = 43/201 (21%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
IFA + G + I L+F W++I ++ F ++ R W G+S
Sbjct: 8 IFAFMDKGGNVLWLIALLVFFM----WTLIFERFWYFTIAWKRDRAAAVDSWEGRS---- 59
Query: 73 CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKL 132
++ + + I+ R+ ++ + I + +
Sbjct: 60 ---------------------------ERKSWNAKQIRMRL-------LSESRQLINDNM 85
Query: 133 SFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIE-SLISILLGLCVSIP 191
+ + + + L+G+LG V GM+ F +A + S+ G +E S I + G+ ++
Sbjct: 86 NVITTCVALCPLLGLLGTVTGMIEVFNVMAVTGGGDAKSMAGGVERSTIPTMAGMVAALS 145
Query: 192 SSIAYNKFIEDSKKFAMQMEG 212
A + + +E
Sbjct: 146 GLFANTYLQRIAGREQQFLED 166
>gi|32265619|ref|NP_859651.1| biopolymer transport protein [Helicobacter hepaticus ATCC 51449]
gi|32261667|gb|AAP76717.1| biopolymer transport protein [Helicobacter hepaticus ATCC 51449]
Length = 150
Score = 63.3 bits (153), Expect = 3e-08, Method: Composition-based stats.
Identities = 22/83 (26%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV-SIPGIIESLISILLG 185
E+ ++L+ + ++ S +G+LG V+G+M F I + + G+ +L + G
Sbjct: 48 ELHKRLTLIATIGSNAPYIGLLGTVIGIMVTFVEIGSTSLIDTQNIMSGLALALKATAAG 107
Query: 186 LCVSIPSSIAYNKFIEDSKKFAM 208
L V+IPS + YN + S+
Sbjct: 108 LIVAIPSIVFYNLLLRRSEVLLS 130
>gi|315123543|ref|YP_004065549.1| putative TonB system-dependent transport protein [Pseudoalteromonas
sp. SM9913]
gi|315017303|gb|ADT70640.1| putative TonB system-dependent transport protein [Pseudoalteromonas
sp. SM9913]
Length = 175
Score = 63.3 bits (153), Expect = 3e-08, Method: Composition-based stats.
Identities = 29/197 (14%), Positives = 70/197 (35%), Gaps = 42/197 (21%)
Query: 17 FMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSL 76
F+ G V +I +L W +I+++ + F R +++ + W +S
Sbjct: 14 FLDTGGQVLLVIAVLIFAM---WLLILERFMYFFNGYRHYKKDVKNTWKTRS-------- 62
Query: 77 KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLG 136
++ + + I+ + ++R + L +
Sbjct: 63 -----------------------ERNSWNAEQIRQAM-------VSRASMRLNANLPLIN 92
Query: 137 SMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIA 195
M + L+G+LG V GM+ F +A + + G+ ++ I + G+ ++ A
Sbjct: 93 VMVALCPLLGLLGTVTGMIEVFDVMAITGTGSARSMASGVSKATIPTMAGMVGALSGVFA 152
Query: 196 YNKFIEDSKKFAMQMEG 212
+K+ ++
Sbjct: 153 STYLQRKAKREVELLQD 169
>gi|332994049|gb|AEF04104.1| MotA/TolQ/ExbB proton channel [Alteromonas sp. SN2]
Length = 452
Score = 62.9 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 37/194 (19%), Positives = 78/194 (40%), Gaps = 27/194 (13%)
Query: 19 QMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKN 78
G V IT++ +L + + K + + + R LKN
Sbjct: 269 HAGGVVGYTITVMLAIGLL---IGLYKLITLTVVAGKMRS----------------QLKN 309
Query: 79 HHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSM 138
N + ++++ A + ++ +D AI REL I ++ +
Sbjct: 310 PGNPSDGNPLGRILKVYQENKAADA-------ENLELKLDEAILRELPRIESGINVIKIF 362
Query: 139 SSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIPSSIAYN 197
++ L+G+LG VLGM+ FQ+I + + + + G I +L++ G+ ++P + ++
Sbjct: 363 AAIAPLLGLLGTVLGMIATFQAITLFGTGDPRMMAGSISMALVTTAQGIIAALPLILTHS 422
Query: 198 KFIEDSKKFAMQME 211
SK ++
Sbjct: 423 IVASRSKSIIHILD 436
>gi|312959891|ref|ZP_07774406.1| MotA/TolQ/ExbB proton channel family protein [Pseudomonas
fluorescens WH6]
gi|311285838|gb|EFQ64404.1| MotA/TolQ/ExbB proton channel family protein [Pseudomonas
fluorescens WH6]
Length = 215
Score = 62.9 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 31/204 (15%), Positives = 84/204 (41%), Gaps = 21/204 (10%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLF-WSGQ 67
MD+++ +++ ++ + I++ + F +RRQ R ++ +
Sbjct: 1 MDMNLLH---------DITFYVMYAAMAIAVFIAIERGIYFAYVRRQARALAEVLGANVH 51
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
S + ++L ++ L + + K +++
Sbjct: 52 SERDLPQALTRRDSLALNMVLPVLAQKASHGSRKDLDD----------VIETQYLSTRAP 101
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYY-SNNVVSIPGIIESLISILLGL 186
+ L + ++++A L+G+LG +LG++ F+++A S+ GI +L + LG+
Sbjct: 102 LARSLWIIETITTAAPLLGLLGTILGIIDTFKALATAGVSDPGQISGGIGTALFATGLGI 161
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQM 210
+++ + +N F + ++ Q+
Sbjct: 162 AIALFCVVFHNFFQDSLERINDQL 185
>gi|239995529|ref|ZP_04716053.1| MotA/TolQ/ExbB proton channel [Alteromonas macleodii ATCC 27126]
Length = 452
Score = 62.9 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 35/196 (17%), Positives = 74/196 (37%), Gaps = 28/196 (14%)
Query: 17 FMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSL 76
+ G I +L I ++ +I ++ +R Q +
Sbjct: 268 YHAGGPVGYTITIMLAIGLLIGIYKMITLTITGGKMRSQLKNVNN--------------- 312
Query: 77 KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLG 136
L I E + + ++ +D AI REL +I ++ +
Sbjct: 313 -PSEGNPLGRILKV-YQE----------NKTADAENLELKLDEAILRELPKIESGINVIK 360
Query: 137 SMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIPSSIA 195
++ L+G+LG VLGM+ FQ+I + + + + G I +L++ G+ ++P +
Sbjct: 361 IFAAIAPLLGLLGTVLGMIETFQTITLFGTGDPRMMAGSISMALVTTAQGIIAALPLILT 420
Query: 196 YNKFIEDSKKFAMQME 211
++ SK ++
Sbjct: 421 HSIVASRSKSIIHILD 436
>gi|116329688|ref|YP_799407.1| TolQ-like transport protein [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
gi|116332572|ref|YP_802289.1| TolQ-like transport protein [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
gi|116122581|gb|ABJ80474.1| TolQ-like transport protein [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
gi|116127439|gb|ABJ77531.1| TolQ-like transport protein [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
Length = 171
Score = 62.9 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 20/89 (22%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
+S++ +++ ++G+LG V+G+ F+ + + ++ + GI +L + + GLC
Sbjct: 79 ETMISWIRNLAGIATMLGLLGTVIGISVAFEEMKSAGTVSLEIFSEGIRLALNTTIQGLC 138
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANE 216
V+IPS + + K ++++ NE
Sbjct: 139 VAIPSVLGFQYLKVILHKTEIELKSSINE 167
>gi|254293575|ref|YP_003059598.1| MotA/TolQ/ExbB proton channel [Hirschia baltica ATCC 49814]
gi|254042106|gb|ACT58901.1| MotA/TolQ/ExbB proton channel [Hirschia baltica ATCC 49814]
Length = 174
Score = 62.9 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 25/190 (13%), Positives = 72/190 (37%), Gaps = 39/190 (20%)
Query: 27 IITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAA 86
++ ++ + + W++I+++ F +
Sbjct: 18 VLFIIMAAAFVMWALILERVFYFRLSHKD------------------------------- 46
Query: 87 IFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVG 146
+ +A+ +W D ++ ++D+I ++ +E + L ++ + ++G
Sbjct: 47 VVANALEKWDSRKDHTSKYAHWVKDKI-------VSEVRQEAQANVVLLKAVVALAPMLG 99
Query: 147 ILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCVSIPSSIAYNKFIEDSKK 205
+LG V GM+ F +A S++ ++ G+ + I + G+ +SI + ++
Sbjct: 100 LLGTVTGMVNVFDLMAITGSSDARAMSAGVSRATIPTMAGMVISISGLLFTMDLDRKVRR 159
Query: 206 FAMQMEGFAN 215
++E
Sbjct: 160 EVAKVEDQME 169
>gi|332140653|ref|YP_004426391.1| TonB system biopolymer transport component [Alteromonas macleodii
str. 'Deep ecotype']
gi|327550675|gb|AEA97393.1| TonB system biopolymer transport component [Alteromonas macleodii
str. 'Deep ecotype']
Length = 343
Score = 62.9 bits (152), Expect = 4e-08, Method: Composition-based stats.
Identities = 35/196 (17%), Positives = 73/196 (37%), Gaps = 28/196 (14%)
Query: 17 FMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSL 76
+ G I +L I ++ +I ++ +R Q +
Sbjct: 159 YHAGGPVGYTITLMLAIGLLIGIYKMITLTIVGGKMRSQLKNVSN--------------- 203
Query: 77 KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLG 136
L I E + + ++ +D AI REL I ++ +
Sbjct: 204 -PSEGNPLGRILKV-YQE----------NKTADAENLELKLDEAILRELPRIESGINVIK 251
Query: 137 SMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIPSSIA 195
++ L+G+LG VLGM+ FQ+I + + + + G I +L++ G+ ++P +
Sbjct: 252 IFAAIAPLLGLLGTVLGMIETFQTITLFGTGDPRMMAGSISMALVTTAQGIIAALPLILT 311
Query: 196 YNKFIEDSKKFAMQME 211
++ SK ++
Sbjct: 312 HSIVASRSKSIIHILD 327
>gi|315126908|ref|YP_004068911.1| TonB system transport protein ExbB2 [Pseudoalteromonas sp. SM9913]
gi|315015422|gb|ADT68760.1| TonB system transport protein ExbB2 [Pseudoalteromonas sp. SM9913]
Length = 174
Score = 62.9 bits (152), Expect = 4e-08, Method: Composition-based stats.
Identities = 20/124 (16%), Positives = 56/124 (45%), Gaps = 5/124 (4%)
Query: 92 MSEWKKSCDKGARSPIGIQD----RIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGI 147
++E+ + + QD R+ + I+ E++ +++ + ++ + L+G+
Sbjct: 44 LAEFPRLTKEIVAKWDARQDTTSWYAHRIREAWISEASEKLDQRMLLIKTLVAICPLIGL 103
Query: 148 LGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKF 206
LG V GM+ F+++A + N + GI + I + G+ ++ ++ ++
Sbjct: 104 LGTVTGMIAVFETMATQGTGNARLMASGISMATIPTMAGMVAALSGVFFSSRLEARARMV 163
Query: 207 AMQM 210
++
Sbjct: 164 KAKL 167
>gi|301061865|ref|ZP_07202595.1| transporter, MotA/TolQ/ExbB proton channel family protein [delta
proteobacterium NaphS2]
gi|300443969|gb|EFK08004.1| transporter, MotA/TolQ/ExbB proton channel family protein [delta
proteobacterium NaphS2]
Length = 211
Score = 62.9 bits (152), Expect = 4e-08, Method: Composition-based stats.
Identities = 39/215 (18%), Positives = 88/215 (40%), Gaps = 19/215 (8%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
+ L G I+ + + S W++I+ K+ + ++R+ +
Sbjct: 7 FWELVEMGGP----IMIPIGLISFWMWALIVIKAEWILRMKRRPL----------PVSDA 52
Query: 73 CKSLKNHHNIGLAAI--FMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
+ L + A+ + K +G G D++ + + A+ ++ +
Sbjct: 53 IRRLGGEEGGDKDYVCPRAGALDFFLKHYFRGRAFLCGEADQL--LFEAAVRHQVRGLYR 110
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISILLGLCVS 189
+ + +++A L+G+LG V GM+ F+ I + N ++ GI E++I+ GL V+
Sbjct: 111 HIPSIMILAAAAPLLGLLGTVSGMVDTFRVIGSHGMGNAQAMASGIKEAMITTQAGLLVA 170
Query: 190 IPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
IP +A ++ + + F S L ++
Sbjct: 171 IPGLLAGQAMRKEIRNIHQSVSEFHKAVSQWLEKE 205
>gi|330988910|gb|EGH87013.1| MotA/TolQ/ExbB proton channel family protein [Pseudomonas syringae
pv. lachrymans str. M301315]
Length = 216
Score = 62.9 bits (152), Expect = 4e-08, Method: Composition-based stats.
Identities = 28/169 (16%), Positives = 73/169 (43%), Gaps = 12/169 (7%)
Query: 44 QKSVNFITLRRQFREFEQLF-WSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKG 102
++ + F +RRQ R + S S + + ++L + L+ + + + +
Sbjct: 27 ERGIYFAYVRRQVRALQTALSASVHSEKDLPEALTRRAGLPLSMVLPVLAQKNAQGSRRD 86
Query: 103 ARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA 162
+++ + L + ++++A L+G+LG +LG++ F+++A
Sbjct: 87 LDD----------VIETQYLSTRAPLARSLWLIETITTAAPLLGLLGTILGIIDTFKALA 136
Query: 163 GYY-SNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQM 210
S+ GI +L + LG+ +++ + +N F + ++ Q+
Sbjct: 137 SAGVSDPGQISAGIGTALFATGLGIAIALFCVVFHNYFQDSLERINDQL 185
>gi|254429497|ref|ZP_05043204.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Alcanivorax sp. DG881]
gi|196195666|gb|EDX90625.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Alcanivorax sp. DG881]
Length = 230
Score = 62.5 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 35/237 (14%), Positives = 92/237 (38%), Gaps = 22/237 (9%)
Query: 1 MNNYGLAIMDISIFA----LFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQF 56
M A ++ + G + I+ +L + ++ +++ + + +
Sbjct: 1 MPTTAAAAQNLGVIETSIKFIQDGGFFMYPILIVLAL----GLALSLERIIYLQATKAKN 56
Query: 57 REFEQLFWSGQSLETVCKSLK--NHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRID 114
++ + + + ++L ++ N G+A + + E KS + D I+
Sbjct: 57 QKTWKDVYPLIAKGQFRQALDVVSNSNTGMAKVIGYGL-ERAKSAKRH--------DDIE 107
Query: 115 RMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGY--YSNNVVSI 172
M+ + + + + ++ + ++ L+G+LG +LG++ F ++A +
Sbjct: 108 LAMEEGLMEIIPRLETRTPYIATFANIATLLGLLGTILGLISAFTAVASADPAQKADLLS 167
Query: 173 PGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNI 229
I ++ + GL +IP +A+ + K ME + +F + RQ
Sbjct: 168 ASISVAMNTTAFGLIAAIPMLLAFAFINSMTGKLVDSMEMASVKFVNVF-RQVSAQQ 223
>gi|300115030|ref|YP_003761605.1| MotA/TolQ/ExbB proton channel [Nitrosococcus watsonii C-113]
gi|299540967|gb|ADJ29284.1| MotA/TolQ/ExbB proton channel [Nitrosococcus watsonii C-113]
Length = 174
Score = 62.5 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 28/185 (15%), Positives = 71/185 (38%), Gaps = 41/185 (22%)
Query: 26 CIITLLFIFSILSWSVIIQKS-VNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGL 84
++ L+ I S+L W++I+++ F+ + R+F
Sbjct: 20 IVLWLILIASLLMWALIVERYYFLFLIYPARLRQF------------------------- 54
Query: 85 AAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLL 144
+ +W++ D+ + I++ + +A + L + ++++ +
Sbjct: 55 -------LGQWQQRQDRQSWYAQRIREGM-------VAEISVSLHRFLLLIKTLAAVLPM 100
Query: 145 VGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDS 203
+G+LG V+GM+ F + + + N GI +LI+ + GL ++
Sbjct: 101 LGLLGTVMGMIQVFDVMTVFGTGNARGFAGGISIALITTMAGLVTALSGLYFSANLEHRV 160
Query: 204 KKFAM 208
++
Sbjct: 161 QRAIQ 165
>gi|119503465|ref|ZP_01625548.1| Lipid A export ATP-binding/permease protein MsbA [marine gamma
proteobacterium HTCC2080]
gi|119460527|gb|EAW41619.1| Lipid A export ATP-binding/permease protein MsbA [marine gamma
proteobacterium HTCC2080]
Length = 172
Score = 62.5 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 35/201 (17%), Positives = 70/201 (34%), Gaps = 43/201 (21%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
I A + G + I L+F W++I ++ F + R+ R L W ++
Sbjct: 8 ILAFMEKGGNVLWLIAILVFFM----WTLIFERLWYFSSTWRKDRAEVVLVWENRT---- 59
Query: 73 CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKL 132
E + K R + ++ + I +
Sbjct: 60 ---------------------ERRSWNAKQIRQKM-------------LSSSRDMINNNM 85
Query: 133 SFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIE-SLISILLGLCVSIP 191
+ + + + L+G+LG V GM+ F +A + S+ G +E S I + G+ ++
Sbjct: 86 NVITTCVALCPLLGLLGTVTGMIEVFNVMAVTGGGDAKSMAGGVEKSTIPTMAGMVAALS 145
Query: 192 SSIAYNKFIEDSKKFAMQMEG 212
A + + M +E
Sbjct: 146 GLFANTYLQRVASREQMFLED 166
>gi|13774064|gb|AAG23397.1| ExbB [Plesiomonas shigelloides]
Length = 269
Score = 62.5 bits (151), Expect = 5e-08, Method: Composition-based stats.
Identities = 30/191 (15%), Positives = 72/191 (37%), Gaps = 13/191 (6%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAI 87
+ L S L+ +++ + + R + + Q L +L + L +
Sbjct: 14 MWPLLTCSFLTGVILLDRLFRLLQAGRLGQHHL----AAQLLPGHSNTLNSVSASQLDTM 69
Query: 88 FMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAR-----ELEEITEKLSFLGSMSSAG 142
S ++S + + ++ + IA + +++ L L +++
Sbjct: 70 QQSLQQ--RRSLLLQGVALLLTHRNENKALREEIAAIWLQSKRRQLSSGLKLLNLIAAIS 127
Query: 143 LLVGILGAVLGMMGFFQSIAGYYS--NNVVSIPGIIESLISILLGLCVSIPSSIAYNKFI 200
L+G+LG +LG++ FQ I S + G+ ++ + GL +++P+ + F
Sbjct: 128 PLLGLLGTILGLIQMFQDIGASNSPVTPALLADGLGVAMYTTAAGLFIALPALVGSQLFS 187
Query: 201 EDSKKFAMQME 211
+ E
Sbjct: 188 LWIDRLINGAE 198
>gi|119470958|ref|ZP_01613542.1| putative TonB system-dependent transport protein [Alteromonadales
bacterium TW-7]
gi|119445980|gb|EAW27260.1| putative TonB system-dependent transport protein [Alteromonadales
bacterium TW-7]
Length = 175
Score = 62.5 bits (151), Expect = 5e-08, Method: Composition-based stats.
Identities = 31/197 (15%), Positives = 70/197 (35%), Gaps = 42/197 (21%)
Query: 17 FMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSL 76
F+ G V +I +L W +I+++ + F R ++ + WS ++
Sbjct: 14 FLDTGGQVLLVIGVLIFAM---WLLILERFIYFFNGFRGYKNSIKGTWSTRN-------- 62
Query: 77 KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLG 136
++ + + I+ + I+R + L +
Sbjct: 63 -----------------------ERNSWNAEQIRQAM-------ISRASMRLNANLPLIN 92
Query: 137 SMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIA 195
M + L+G+LG V GM+ F +A + + G+ ++ I + G+ ++ A
Sbjct: 93 VMVALCPLLGLLGTVTGMIEVFDVMAITGTGSARSMASGVSKATIPTMAGMVGALSGVFA 152
Query: 196 YNKFIEDSKKFAMQMEG 212
+K+ +E
Sbjct: 153 STYLQRKAKREVELLED 169
>gi|115379829|ref|ZP_01466896.1| adventurous gliding motility protein R [Stigmatella aurantiaca
DW4/3-1]
gi|115363163|gb|EAU62331.1| adventurous gliding motility protein R [Stigmatella aurantiaca
DW4/3-1]
Length = 108
Score = 62.5 bits (151), Expect = 5e-08, Method: Composition-based stats.
Identities = 17/86 (19%), Positives = 42/86 (48%), Gaps = 2/86 (2%)
Query: 138 MSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVS--IPGIIESLISILLGLCVSIPSSIA 195
+ +A +L G+LG V G++ F+++A + + GI E++ GL +IP+ +A
Sbjct: 2 LGNAAMLAGLLGTVSGLISCFEAVANVNPADKATILANGISEAMNCTGFGLLTAIPALVA 61
Query: 196 YNKFIEDSKKFAMQMEGFANEFSAIL 221
++ + ++ + + ++
Sbjct: 62 FSVLMGRTQTLINDINETSVSVLNLI 87
>gi|166363595|ref|YP_001655868.1| MotA/TolQ/ExbB proton channel family protein [Microcystis
aeruginosa NIES-843]
gi|166085968|dbj|BAG00676.1| MotA/TolQ/ExbB proton channel family protein [Microcystis
aeruginosa NIES-843]
Length = 225
Score = 62.1 bits (150), Expect = 5e-08, Method: Composition-based stats.
Identities = 41/195 (21%), Positives = 77/195 (39%), Gaps = 20/195 (10%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFIT-LRRQFREFEQLFWSG-QS 68
++I L + G+A + L SIL+ S II++ + L + + ++ S ++
Sbjct: 1 MTITDLIQKGGVA----MWPLLFLSILALSTIIERIWFWSRTLLSEGQILNRIMESAIRN 56
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ K + N + + + R + ++ A +L +
Sbjct: 57 WDLAAKVAGDSRNHPIGSYLYA-----------PLRLENPDPEVFHFALESAADEQLSLM 105
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGY---YSNNVVSIPGIIESLISILLG 185
L ++ + L+G+LG VLG++ +I S+ GI E+LIS G
Sbjct: 106 KRGDKILEAVIALSPLLGLLGTVLGLITSLANIQLSDLGTSSTAGVTLGISEALISTATG 165
Query: 186 LCVSIPSSIAYNKFI 200
L V+I S Y F
Sbjct: 166 LIVAIFSLAFYRVFQ 180
>gi|261416283|ref|YP_003249966.1| MotA/TolQ/ExbB proton channel [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|261372739|gb|ACX75484.1| MotA/TolQ/ExbB proton channel [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|302327438|gb|ADL26639.1| MotA/TolQ/ExbB proton channel family protein [Fibrobacter
succinogenes subsp. succinogenes S85]
Length = 212
Score = 62.1 bits (150), Expect = 6e-08, Method: Composition-based stats.
Identities = 28/156 (17%), Positives = 64/156 (41%), Gaps = 8/156 (5%)
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
LE + K+ + +A + + + + +D + D E +
Sbjct: 63 LEQALQFAKSSK-LPIAKVMDAIVG-----AKLNCKDADKARDMMTAASDAVFLTEAPRL 116
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSN--NVVSIPGIIESLISILLGL 186
T +S + M+S L+G++G + G++ F ++A ++ GI ++ + LLGL
Sbjct: 117 TRYISIISVMASISTLLGLMGTIYGLIYTFDAVANKPASERAKALADGIAIAMGTTLLGL 176
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
++P + +S++ +ME + L+
Sbjct: 177 LSAVPLLVIVGLLNMNSERLIQEMEEKGLKIINSLA 212
>gi|330900778|gb|EGH32197.1| biopolymer transport protein ExbB [Pseudomonas syringae pv.
japonica str. M301072PT]
Length = 82
Score = 62.1 bits (150), Expect = 6e-08, Method: Composition-based stats.
Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 163 GYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
G S V+ P I +L++ +G+ V++P+ + YN F+ K M+ FA++F A+
Sbjct: 1 GSASLEAVAGP-IGHALVATGVGIAVAVPAVLIYNFFLRRLKLAVADMDDFAHDFDALAQ 59
Query: 223 R 223
R
Sbjct: 60 R 60
>gi|77362431|ref|YP_342005.1| putative TonB system-dependent transport protein [Pseudoalteromonas
haloplanktis TAC125]
gi|76877342|emb|CAI89559.1| putative TonB system-dependent transport protein [Pseudoalteromonas
haloplanktis TAC125]
Length = 175
Score = 61.7 bits (149), Expect = 7e-08, Method: Composition-based stats.
Identities = 23/127 (18%), Positives = 48/127 (37%), Gaps = 2/127 (1%)
Query: 88 FMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVA-IARELEEITEKLSFLGSMSSAGLLVG 146
F + +KK+ + A I+R + L+ + M + L+G
Sbjct: 43 FFNGFRGYKKAIKNSWLKRNERNSWNAEQIRQAMISRASMRLNANLALINVMVALCPLLG 102
Query: 147 ILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKK 205
+LG V GM+ F +A + + G+ ++ I + G+ ++ A +K+
Sbjct: 103 LLGTVTGMIEVFDVMAITGTGSARSMASGVSKATIPTMAGMVGALSGVFASTYLQRRAKR 162
Query: 206 FAMQMEG 212
+E
Sbjct: 163 EVALLED 169
>gi|17232079|ref|NP_488627.1| hypothetical protein alr4587 [Nostoc sp. PCC 7120]
gi|17133723|dbj|BAB76286.1| alr4587 [Nostoc sp. PCC 7120]
Length = 213
Score = 61.7 bits (149), Expect = 8e-08, Method: Composition-based stats.
Identities = 40/197 (20%), Positives = 81/197 (41%), Gaps = 23/197 (11%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKS----VNFITLRRQFREFEQLFWSG 66
+ I LF G+ ++ L FS+L+ ++II++ RE +L+
Sbjct: 1 MGILNLFTAGGV----VMWPLLAFSLLAVALIIERISFWVRILGKQNLIVREVLRLYQLD 56
Query: 67 QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
+ T+ ++L+ + ++ +A IF++A + ++ E+
Sbjct: 57 NVVSTL-EALRQNADLPIARIFLAA-----------LELEEPTPEEFRLALESEAQAEIP 104
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGY---YSNNVVSIPGIIESLISIL 183
+ + ++ L+G+LG VLG++ F S+ + GI E+L+S
Sbjct: 105 VLKRFQNIFDTIIGLAPLLGLLGTVLGLINSFASLDIGDVGGTKTAGVTAGISEALVSTA 164
Query: 184 LGLCVSIPSSIAYNKFI 200
GL V+I + N F
Sbjct: 165 SGLVVAILTLFFANSFR 181
>gi|254491916|ref|ZP_05105095.1| transporter, MotA/TolQ/ExbB proton channel family, putative
[Methylophaga thiooxidans DMS010]
gi|224463394|gb|EEF79664.1| transporter, MotA/TolQ/ExbB proton channel family, putative
[Methylophaga thiooxydans DMS010]
Length = 174
Score = 61.4 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 34/194 (17%), Positives = 76/194 (39%), Gaps = 44/194 (22%)
Query: 26 CIITLLFIFSILSWSVIIQK-SVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGL 84
++ L+ + SIL WS+II++ +I R +
Sbjct: 20 FVLWLILLVSILMWSLIIERYLFVYIQHPRSVK--------------------------- 52
Query: 85 AAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLL 144
S + EW++ D+ + I+ + IA+ + L + ++++A +
Sbjct: 53 -----SMIDEWQQRQDRTSWYAQQIRQGM-------IAKNRVSLQRYLMSIRTLTAALPM 100
Query: 145 VGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDS 203
+G+LG V GM+ F + + + N GI +LI+ + GL ++ +
Sbjct: 101 LGLLGTVNGMIQVFDVMTVFGTGNTRGMAGGISVALITTMGGLLTALSGLYFSTQLT--- 157
Query: 204 KKFAMQMEGFANEF 217
+ + +++ A+
Sbjct: 158 QTVSRKVDNVADAL 171
>gi|332533406|ref|ZP_08409271.1| ferric siderophore transport system, biopolymer transport protein
ExbB [Pseudoalteromonas haloplanktis ANT/505]
gi|332037115|gb|EGI73572.1| ferric siderophore transport system, biopolymer transport protein
ExbB [Pseudoalteromonas haloplanktis ANT/505]
Length = 144
Score = 61.4 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 22/127 (17%), Positives = 48/127 (37%), Gaps = 2/127 (1%)
Query: 88 FMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVA-IARELEEITEKLSFLGSMSSAGLLVG 146
F + +K + + + A I+R + LS + M + L+G
Sbjct: 12 FFNGFRSYKHALKANWINRAERDSWNAEQIREAMISRAGMRLNTNLSLINVMVALCPLLG 71
Query: 147 ILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKK 205
+LG V GM+ F +A + + G+ ++ I + G+ ++ A +K+
Sbjct: 72 LLGTVTGMIEVFDVMAITGTGSARSMASGVSKATIPTMAGMVGALSGVFASTYLQRKAKR 131
Query: 206 FAMQMEG 212
++
Sbjct: 132 EVELLQD 138
>gi|86138075|ref|ZP_01056650.1| MotA/TolQ/ExbB proton channel family domain protein [Roseobacter
sp. MED193]
gi|85825102|gb|EAQ45302.1| MotA/TolQ/ExbB proton channel family domain protein [Roseobacter
sp. MED193]
Length = 205
Score = 61.0 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 48/196 (24%), Positives = 82/196 (41%), Gaps = 14/196 (7%)
Query: 27 IITLLFIFSILSWSVIIQKSVNFI--TLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGL 84
II LL + S+LS ++I K T + R+ W G + ++
Sbjct: 14 IIALLAVISLLSLTLIAVKLAQLWPVTSGKDQRQAAIELWRGGD-KHGAQAKVASGKSPA 72
Query: 85 AAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLL 144
I AMS G + P+ + ++ E++ + + L ++ L
Sbjct: 73 DRILHFAMSAM----QGGLKGPVLTSE-----LERRGNEEIQGMNGLIRLLELIAMVSPL 123
Query: 145 VGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIED 202
+G+LG VLGM+ FQ + A +N V GI ++L++ GL V+IP++IA F
Sbjct: 124 LGLLGTVLGMIQSFQELELAQGAANASVLAGGIWQALLTTAAGLVVAIPAAIAAGLFSAR 183
Query: 203 SKKFAMQMEGFANEFS 218
AM +E +
Sbjct: 184 IDHAAMLIESAVGQLM 199
>gi|254448104|ref|ZP_05061567.1| MotA/TolQ/ExbB proton channel [gamma proteobacterium HTCC5015]
gi|198262230|gb|EDY86512.1| MotA/TolQ/ExbB proton channel [gamma proteobacterium HTCC5015]
Length = 173
Score = 61.0 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/185 (15%), Positives = 69/185 (37%), Gaps = 40/185 (21%)
Query: 29 TLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIF 88
+L + IL W +I+++ V F + R + L +
Sbjct: 22 AILLVVFIL-WVLIVERLVYFFLVHR------------KRLSDI---------------- 52
Query: 89 MSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGIL 148
+ EW+ ++ + I+ + +++A + + + M + L+G+
Sbjct: 53 ---VGEWEARKERTSWYAHNIRQDLVVQVEMA-------LEANMGLIKVMVAICPLLGLT 102
Query: 149 GAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFA 207
G V GM+ F +A S + GI ++++ + G+ +I A++ +
Sbjct: 103 GTVTGMIEVFDVMAYMGSGSPRAMASGIFKAMLPTMAGMVGAITGVFAHSLLQRRIESEK 162
Query: 208 MQMEG 212
+ +E
Sbjct: 163 IHIED 167
>gi|330953146|gb|EGH53406.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae Cit 7]
Length = 82
Score = 61.0 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 17/74 (22%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAI 87
+ LL IFS+++W++++ K+ L RQ R + FW+ + L+ + LA +
Sbjct: 1 MALLVIFSLVTWALLLGKTFQHWRLTRQNRRYATQFWAARDLKNALHL--PNSEGSLARL 58
Query: 88 FMSAMSEWKKSCDK 101
+ D
Sbjct: 59 TDAGAQALAAPHDS 72
>gi|16331792|ref|NP_442520.1| hypothetical protein sll0477 [Synechocystis sp. PCC 6803]
gi|3913607|sp|Q55834|EXBL1_SYNY3 RecName: Full=Putative biopolymer transport protein exbB-like 1
gi|1001752|dbj|BAA10590.1| sll0477 [Synechocystis sp. PCC 6803]
Length = 254
Score = 61.0 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/178 (16%), Positives = 68/178 (38%), Gaps = 20/178 (11%)
Query: 43 IQKSVNFITLRRQFREFEQLFWSG--QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCD 100
++ + L Q + + + L + ++ ++ + ++ +
Sbjct: 58 FERGWFWSRLLIQEDQVVRDVLDAAVEDLVKAREIAEHARHLAIGRFLLAPLK------- 110
Query: 101 KGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQS 160
R P R+ M+ +E + L ++ + L+G+LG V G++ F +
Sbjct: 111 --LRHPSPETFRL--AMEATADKEFARMRRGDKLLETIIALAPLLGLLGTVTGLIRTFNN 166
Query: 161 I----AGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFA 214
+ G + + GI E+LI+ G+ V+I + + + + QM+ FA
Sbjct: 167 LNIGGGGSSAEATQAASGIGEALITTAAGMMVAIFALLVFRVL---VSLQSQQMDYFA 221
>gi|262275430|ref|ZP_06053240.1| ferric siderophore transport system biopolymer transport protein
ExbB [Grimontia hollisae CIP 101886]
gi|262220675|gb|EEY71990.1| ferric siderophore transport system biopolymer transport protein
ExbB [Grimontia hollisae CIP 101886]
Length = 183
Score = 61.0 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/186 (13%), Positives = 64/186 (34%), Gaps = 41/186 (22%)
Query: 27 IITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAA 86
++ L + ++LSW ++ ++ + T
Sbjct: 29 VLWGLALVAVLSWLLVFERLLFLTTA---------------------------------- 54
Query: 87 IFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE-EITEKLSFLGSMSSAGLLV 145
+K + S + R M + + ++ L+FL ++ + ++
Sbjct: 55 -----FPALQKQYVEKWYSREDKTSWVARAMRESWLFDAHTQLYRNLNFLKALVAICPML 109
Query: 146 GILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSK 204
G+LG V GM+ F +A S GI + + + G+ +++ A+ + + +
Sbjct: 110 GLLGTVTGMISVFDVMALQGSGEPRSMAAGISLATLPTMAGMVIALAGLFAHARLQKTCE 169
Query: 205 KFAMQM 210
+ +
Sbjct: 170 RREASL 175
>gi|224437884|ref|ZP_03658831.1| biopolymer transport protein [Helicobacter cinaedi CCUG 18818]
gi|313144333|ref|ZP_07806526.1| biopolymer transport protein [Helicobacter cinaedi CCUG 18818]
gi|313129364|gb|EFR46981.1| biopolymer transport protein [Helicobacter cinaedi CCUG 18818]
Length = 154
Score = 61.0 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 22/82 (26%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVS-IPGIIESLISILLGL 186
+ ++L+ + ++ S VG+LG V+G+M F I + S + G+ +L + GL
Sbjct: 49 LHKRLTLIATIGSNAPYVGLLGTVIGIMVTFVEIGSNSLVDTQSIMAGLALALKATAAGL 108
Query: 187 CVSIPSSIAYNKFIEDSKKFAM 208
V+IPS + YN + ++
Sbjct: 109 VVAIPSIVFYNLLLRKAEVLLS 130
>gi|127513404|ref|YP_001094601.1| MotA/TolQ/ExbB proton channel [Shewanella loihica PV-4]
gi|126638699|gb|ABO24342.1| MotA/TolQ/ExbB proton channel [Shewanella loihica PV-4]
Length = 175
Score = 61.0 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 26/210 (12%), Positives = 72/210 (34%), Gaps = 45/210 (21%)
Query: 6 LAIMDI--SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLF 63
L +MDI S+ G + + +LF+ W +++++
Sbjct: 3 LYLMDIWDSVRGFMASGGDVLWLVAAVLFLM----WVLMLERYWYLN------------- 45
Query: 64 WSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAR 123
+ A E K + R+ + +++
Sbjct: 46 -------------------------LIAPKEHKNIITAWDKREDSTSWHAHRIREAWVSQ 80
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISI 182
+++ ++ + ++ + ++G+LG V GM+ F +A + ++N + GI + +
Sbjct: 81 AKQDMNARMLIIKTLVAICPMIGLLGTVTGMIQVFDVMAVHGTSNARMMAAGISMATMPT 140
Query: 183 LLGLCVSIPSSIAYNKFIEDSKKFAMQMEG 212
+ G+ ++ + K +++
Sbjct: 141 MAGMVAALSGVFFSTRLDAKMKISMEKLKD 170
>gi|292493723|ref|YP_003529162.1| MotA/TolQ/ExbB proton channel [Nitrosococcus halophilus Nc4]
gi|291582318|gb|ADE16775.1| MotA/TolQ/ExbB proton channel [Nitrosococcus halophilus Nc4]
Length = 174
Score = 61.0 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/184 (13%), Positives = 70/184 (38%), Gaps = 39/184 (21%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLA 85
++ ++ + S+L W +II++ + +
Sbjct: 20 GVLWVILVASVLMWVLIIERYYFMLVV-------------------------------YP 48
Query: 86 AIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLV 145
+ + W++ ++ + I++ + IA + + + L + ++++ ++
Sbjct: 49 SQLQRLIDHWQQRQERYSWQAQRIREGM-------IAELSQNLRKFLLPIKTLTAVLPML 101
Query: 146 GILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSK 204
G+LG V+GM+ F + + + NV GI +LI+ + GL ++ ++
Sbjct: 102 GLLGTVIGMIQVFDVMTVFGTGNVRGFAGGISVALITTMAGLVTALSGLYFSANLEHRAQ 161
Query: 205 KFAM 208
+
Sbjct: 162 RAIQ 165
>gi|221134890|ref|ZP_03561193.1| MotA/TolQ/ExbB proton channel [Glaciecola sp. HTCC2999]
Length = 178
Score = 60.6 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 26/125 (20%), Positives = 52/125 (41%), Gaps = 8/125 (6%)
Query: 89 MSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGIL 148
SAM EW DK + + ++ +I I+R + + + ++ + L+G++
Sbjct: 50 RSAMQEWLARSDKSSWNAEQVRQKI-------ISRLIMNLNGSTPIIQALVALCPLLGLM 102
Query: 149 GAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFA 207
G V GM+ F +A S + G+ ++ I + G+ ++ A K
Sbjct: 103 GTVTGMIEVFDVMAISGSGSARSMASGVSKATIPTMAGMVGALSGVFASTWLTRKVKTER 162
Query: 208 MQMEG 212
M +E
Sbjct: 163 MHLED 167
>gi|313669408|ref|YP_004049835.1| MotA/TolQ/ExbB proton channel [Sulfuricurvum kujiense DSM 16994]
gi|313156605|gb|ADR35282.1| MotA/TolQ/ExbB proton channel [Sulfuricurvum kujiense DSM 16994]
Length = 171
Score = 60.6 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 21/85 (24%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGL 186
E+ K++ + S+SS + +G+LG VLG+M I + +++ + LIS L
Sbjct: 56 ELNRKMTLIYSISSNAVYIGLLGTVLGVMVTLSQIGSANQSGLIAA--LSLPLISTAASL 113
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQME 211
V+I + +N + M+ +
Sbjct: 114 VVAIIGTFFFNALQNEIDVVRMKWD 138
>gi|126173874|ref|YP_001050023.1| MotA/TolQ/ExbB proton channel [Shewanella baltica OS155]
gi|125997079|gb|ABN61154.1| MotA/TolQ/ExbB proton channel [Shewanella baltica OS155]
Length = 175
Score = 60.6 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/210 (11%), Positives = 71/210 (33%), Gaps = 45/210 (21%)
Query: 6 LAIMDI--SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLF 63
L +MDI S+ G + + +LF+ W ++ ++ + + +
Sbjct: 3 LYLMDIWDSVRGFMASGGDVLWLVAAVLFLM----WVLMFERYWYLNWISPKQHKAIIAA 58
Query: 64 WSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAR 123
W + R+ + +++
Sbjct: 59 WDARE--------------------------------------ETTSWYAHRIREAWMSQ 80
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISI 182
+++ ++ F+ ++ + ++G+LG V GM+ F +A ++N + GI + +
Sbjct: 81 AKQDLNARMLFIKTLVAICPMIGLLGTVTGMISVFDVMAVQGTSNARLMAAGISMATMPT 140
Query: 183 LLGLCVSIPSSIAYNKFIEDSKKFAMQMEG 212
+ G+ ++ + K +++
Sbjct: 141 MAGMVAALSGVFFSTRLDAKMKISLEKLKD 170
>gi|126660473|ref|ZP_01731581.1| biopolymer transport ExbB protein [Cyanothece sp. CCY0110]
gi|126618232|gb|EAZ88993.1| biopolymer transport ExbB protein [Cyanothece sp. CCY0110]
Length = 223
Score = 60.6 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 47/212 (22%), Positives = 85/212 (40%), Gaps = 21/212 (9%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFIT-LRRQFREFEQLFW-SGQSLETVCKSLKNHHNIGLA 85
+ L I S+L+ S II++S+ +I L ++ + ++ + ++ + K K H +
Sbjct: 8 MWPLLILSVLALSTIIERSIFWIRFLLKEGKILNRVLETAARNWDAAPKVAKEHSKHPIG 67
Query: 86 AIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLV 145
R + ++ + EL + L ++ + L+
Sbjct: 68 NFLY-----------GPLRLDNPDPEVFHLALESSADDELALMRRGDKVLEAVIALSPLL 116
Query: 146 GILGAVLGMMGFFQSIA----GYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIE 201
G+LG VLG++ +I G S V++ GI E+LIS GL V+I S Y F
Sbjct: 117 GLLGTVLGLITSLGNIQISDLGTSSTTGVTL-GIGEALISTATGLIVAIISLTFYRIFQS 175
Query: 202 DSKKFAMQMEGFANEFSAILSRQ---TEGNIS 230
+E I ++ +EGN S
Sbjct: 176 LWSNQVRVFRKAGSELEVIYRQRWSDSEGNPS 207
>gi|261253061|ref|ZP_05945634.1| ferric siderophore transport system biopolymer transport protein
ExbB [Vibrio orientalis CIP 102891]
gi|260936452|gb|EEX92441.1| ferric siderophore transport system biopolymer transport protein
ExbB [Vibrio orientalis CIP 102891]
Length = 171
Score = 60.6 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 18/109 (16%), Positives = 49/109 (44%), Gaps = 2/109 (1%)
Query: 105 SPIGIQDRIDRMMDVA-IARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAG 163
S R + +++ +T+ L+ + + + ++G+LG V GM+ F +A
Sbjct: 56 SRSDHNTWHARSIREGWLSQAHLSLTQNLNIIKVLVAICPMLGLLGTVTGMISVFDVMAS 115
Query: 164 YYSNN-VVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
S+N + GI + + + G+ ++ + + ++ + +++E
Sbjct: 116 QGSSNPKLMASGISLATLPTMAGMVAALTGMFFHARLVKVCHRQEIKLE 164
>gi|254786071|ref|YP_003073500.1| MotA/TolQ/ExbB proton channel [Teredinibacter turnerae T7901]
gi|237686543|gb|ACR13807.1| MotA/TolQ/ExbB proton channel [Teredinibacter turnerae T7901]
Length = 170
Score = 60.6 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/198 (13%), Positives = 62/198 (31%), Gaps = 43/198 (21%)
Query: 11 ISIFALFMQMGLAVKC--IITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS 68
+ + +F K ++ + +I W +I+++ F + ++ W +
Sbjct: 1 MGLLPMFQ--DFMDKGGNVLWAILFMAIWLWWMILERYWYFFAEHKLGKKACISTWEARD 58
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
E+ DR I+ +
Sbjct: 59 -------------------------EYTSW-------------YADRERAQLISEVDCSM 80
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
+ L + ++ + + G+LG V GM+ F +A S N G+ + I + G+
Sbjct: 81 LKNLKMIPTLIALLPMFGLLGTVTGMIQVFDVMAFMGSGNPRAMANGVSAATIPTMAGMV 140
Query: 188 VSIPSSIAYNKFIEDSKK 205
V++ + K+
Sbjct: 141 VALIAIPFATGLDRRYKR 158
>gi|187735055|ref|YP_001877167.1| MotA/TolQ/ExbB proton channel [Akkermansia muciniphila ATCC
BAA-835]
gi|187425107|gb|ACD04386.1| MotA/TolQ/ExbB proton channel [Akkermansia muciniphila ATCC
BAA-835]
Length = 263
Score = 60.6 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 19/88 (21%), Positives = 42/88 (47%), Gaps = 1/88 (1%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
+D I+ + A E + + ++ L + ++G+ G V GM+G F ++A +
Sbjct: 133 KDAIEDAVADFTANESRSVFKWINMLALCAQISPMLGLFGTVQGMVGAFGTLATAGQADP 192
Query: 170 VSIPG-IIESLISILLGLCVSIPSSIAY 196
+ G I +L++ GL +I ++ +
Sbjct: 193 TQLAGDISVALLTTFWGLINAIIATPFF 220
>gi|319956892|ref|YP_004168155.1| outer membrane transport energization protein exbb [Nitratifractor
salsuginis DSM 16511]
gi|319419296|gb|ADV46406.1| outer membrane transport energization protein ExbB [Nitratifractor
salsuginis DSM 16511]
Length = 148
Score = 60.6 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 19/86 (22%), Positives = 40/86 (46%), Gaps = 2/86 (2%)
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSN--NVVSIPGIIESLISILLG 185
++ L L ++ S+ +G+LG V+ ++ F I S + + +L + G
Sbjct: 54 LSRHLGTLATIGSSAPYIGLLGTVIAIILTFYVIGERKSAIQTGEIMKDLALALKATAAG 113
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQME 211
L V+IP+++ YN ++ + E
Sbjct: 114 LIVAIPATVFYNILMDRVDRLLTHWE 139
>gi|22297859|ref|NP_681106.1| biopolymer transport ExbB like protein [Thermosynechococcus
elongatus BP-1]
gi|22294037|dbj|BAC07868.1| biopolymer transport ExbB like protein [Thermosynechococcus
elongatus BP-1]
Length = 284
Score = 60.2 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 42/211 (19%), Positives = 78/211 (36%), Gaps = 20/211 (9%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNF-ITLRRQFREFEQLFWSGQ-SL 69
+I +F + GLA + L I SIL+ I ++ + + LR + + EQ+ + +
Sbjct: 67 NIAEIFNRGGLA----MWPLLILSILTLGTIFERLWFWGMVLRGETKLAEQILDAARHDW 122
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+ + N + + + + ++ A EL +
Sbjct: 123 QEALELAANACDQPIGRFLY-----------TPLQLIDTNPEIFRLALEAAADEELSAMR 171
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYS-NNVVSIPGIIESLISILLGL 186
L + + L+G+LG VLG++ SI + + GI E+LIS GL
Sbjct: 172 RGEKVLEATITMAPLLGLLGTVLGLISALSSIRLGDIGTPATLGVGLGISEALISTASGL 231
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEF 217
++I + F + A NE
Sbjct: 232 VIAIIALAFQRLFQAFLLQQAQIFRRTGNEL 262
>gi|71280088|ref|YP_270421.1| biopolymer transport exbB protein [Colwellia psychrerythraea 34H]
gi|71145828|gb|AAZ26301.1| biopolymer transport exbB protein [Colwellia psychrerythraea 34H]
Length = 174
Score = 60.2 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 26/200 (13%), Positives = 66/200 (33%), Gaps = 43/200 (21%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLET 71
S+ G + + L + W ++I++ ++ R+ W +
Sbjct: 10 SVRGFIATGGNVLYVVAFALLLM----WILMIERYWFLASVYPTMRDDIIARWDAR---- 61
Query: 72 VCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEK 131
R+ + I+ E + ++
Sbjct: 62 ----------------------------------RDTTSWYAHRIRETWISEADELLEQR 87
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSI 190
+ + ++ + L+G+LG V GM+G F+ +A + N + GI ++ I + G+ ++
Sbjct: 88 MITIRTLVAMCPLIGLLGTVTGMIGVFEVMAEQGTGNPRLMAAGISQATIPTMAGMVAAL 147
Query: 191 PSSIAYNKFIEDSKKFAMQM 210
++ K ++
Sbjct: 148 SGVFFSSRLDAKVKLAKAKL 167
>gi|172036031|ref|YP_001802532.1| putative biopolymer transport protein [Cyanothece sp. ATCC 51142]
gi|171697485|gb|ACB50466.1| putative biopolymer transport protein [Cyanothece sp. ATCC 51142]
Length = 229
Score = 60.2 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 40/180 (22%), Positives = 76/180 (42%), Gaps = 18/180 (10%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFIT-LRRQFREFEQLFW-SGQSLETVCKSLKNHHNIGLA 85
+ L I S+L+ S II++S+ +I L ++ + ++ + ++ + K K + +
Sbjct: 14 MWPLLILSVLALSTIIERSIFWIRFLLKEGKILNRVLETAARNWDAAPKVAKENSKHPMG 73
Query: 86 AIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLV 145
+ R + ++ + EL + L ++ + L+
Sbjct: 74 SFLY-----------GPLRLDNPDPEVFHLALESSADDELALMRRGDKVLEAVIALSPLL 122
Query: 146 GILGAVLGMMGFFQSIA----GYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIE 201
G+LG VLG++ +I G S V++ GI E+LIS GL V+I S Y F
Sbjct: 123 GLLGTVLGLITSLGNIQISDLGTSSTTGVTL-GIGEALISTATGLIVAIISLTFYRIFQS 181
>gi|170522211|gb|ABF82027.2| ExbB2 [Vibrio alginolyticus]
Length = 170
Score = 60.2 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 21/93 (22%), Positives = 47/93 (50%), Gaps = 1/93 (1%)
Query: 121 IARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-VVSIPGIIESL 179
IA+ E+ + LS + + + ++G+LG V GM+ F +A S+N + GI +
Sbjct: 72 IAKAQIELRQNLSTIKLLVAVCPMLGLLGTVTGMITVFDVMASQGSSNPKLMASGISLAT 131
Query: 180 ISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEG 212
+ + G+ ++ + + + ++ A+Q+E
Sbjct: 132 LPTMAGMVAALAGMFIHARLSKVCERKAIQLEQ 164
>gi|308048884|ref|YP_003912450.1| outer membrane transport energization protein ExbB [Ferrimonas
balearica DSM 9799]
gi|307631074|gb|ADN75376.1| outer membrane transport energization protein ExbB [Ferrimonas
balearica DSM 9799]
Length = 174
Score = 60.2 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 18/100 (18%), Positives = 45/100 (45%), Gaps = 1/100 (1%)
Query: 112 RIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-V 170
R+ + I++ E++ ++ + ++ + ++G+LG V GM+ F+ +A + N +
Sbjct: 68 YAHRIREAWISQAKEQLNARMGLINTLVAICPMLGLLGTVTGMIAVFEVMAVQGTGNPRL 127
Query: 171 SIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQM 210
GI + I + G+ ++ + K Q+
Sbjct: 128 MAGGISMATIPTMSGMVAALSGVFFSTRLNAKLKLSQEQL 167
>gi|77164132|ref|YP_342657.1| MotA/TolQ/ExbB proton channel [Nitrosococcus oceani ATCC 19707]
gi|254435073|ref|ZP_05048580.1| transporter, MotA/TolQ/ExbB proton channel family, putative
[Nitrosococcus oceani AFC27]
gi|76882446|gb|ABA57127.1| outer membrane transport energization protein ExbB [Nitrosococcus
oceani ATCC 19707]
gi|207088184|gb|EDZ65456.1| transporter, MotA/TolQ/ExbB proton channel family, putative
[Nitrosococcus oceani AFC27]
Length = 174
Score = 60.2 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/184 (13%), Positives = 69/184 (37%), Gaps = 39/184 (21%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLA 85
++ L+ + S+L W++I+++ + +
Sbjct: 20 IVLWLILMASLLMWALIVERYYFLLLI-------------------------------YP 48
Query: 86 AIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLV 145
A + +W++ D+ + I++ + +A + L + ++++ ++
Sbjct: 49 ARLQQFLKQWQQRQDRQSWYAQRIREGM-------VAEISASLHRFLLPIKTLAAVLPML 101
Query: 146 GILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSK 204
G+LG V+GM+ F + + + N GI +LI+ + GL ++ ++
Sbjct: 102 GLLGTVMGMIQVFDVMTVFGTGNARGFAGGISIALITTMAGLVTALSGLYFSANLEHRAQ 161
Query: 205 KFAM 208
+
Sbjct: 162 RAIQ 165
>gi|145297919|ref|YP_001140760.1| TonB system transport protein ExbB2 [Aeromonas salmonicida subsp.
salmonicida A449]
gi|142850691|gb|ABO89012.1| TonB system transport protein ExbB2 [Aeromonas salmonicida subsp.
salmonicida A449]
Length = 175
Score = 60.2 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 16/96 (16%), Positives = 43/96 (44%), Gaps = 1/96 (1%)
Query: 118 DVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGII 176
++R + + + + + + L+G+LG V+GM+ F ++A + + GI
Sbjct: 75 RELVSRVSMAVDKGMPVIKVLIALCPLMGLLGTVVGMVQVFDTLAITGTGSPRAMASGIS 134
Query: 177 ESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEG 212
++ + + G+ ++ N+ +K ++E
Sbjct: 135 KATVPTMAGMIAALSGLFFVNQLDHKAKLAVQKLED 170
>gi|332140654|ref|YP_004426392.1| TonB system biopolymer transport component [Alteromonas macleodii
str. 'Deep ecotype']
gi|327550676|gb|AEA97394.1| TonB system biopolymer transport component [Alteromonas macleodii
str. 'Deep ecotype']
Length = 174
Score = 60.2 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/194 (12%), Positives = 67/194 (34%), Gaps = 43/194 (22%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLET 71
S+ G + + LF+ W ++I++ ++ + ++ W +
Sbjct: 10 SVRDFIATGGDVLYFVAAALFLM----WVLMIERYWYLTSVFPKVKKNIIANWDAR---- 61
Query: 72 VCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEK 131
R+ D I++ +++ +
Sbjct: 62 ----------------------------------ADTTSWYAHRIRDAWISQASDDLNAR 87
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSI 190
+ + ++ + L+G+LG V GM+ F+++A ++N + GI + I + G+ ++
Sbjct: 88 MLIIRTIIAMCPLIGLLGTVTGMISVFETMATQGTSNARLMAAGISMATIPTMAGMVAAL 147
Query: 191 PSSIAYNKFIEDSK 204
++ K
Sbjct: 148 SGLFISSRLEAKVK 161
>gi|330830956|ref|YP_004393908.1| TonB system transport protein ExbB2 [Aeromonas veronii B565]
gi|328806092|gb|AEB51291.1| TonB system transport protein ExbB2 [Aeromonas veronii B565]
Length = 175
Score = 59.8 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 16/96 (16%), Positives = 43/96 (44%), Gaps = 1/96 (1%)
Query: 118 DVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGII 176
++R + + + + + + L+G+LG V+GM+ F ++A + + GI
Sbjct: 75 RELVSRVAMAVDKGMPVIKVLIALCPLMGLLGTVVGMVQVFDTLAITGTGSPRAMASGIS 134
Query: 177 ESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEG 212
++ + + G+ ++ N+ +K ++E
Sbjct: 135 KATVPTMAGMIAALSGLFFVNQLDHKAKLAVQKLED 170
>gi|289672762|ref|ZP_06493652.1| biopolymer transport protein ExbB [Pseudomonas syringae pv.
syringae FF5]
Length = 74
Score = 59.8 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 15/52 (28%), Positives = 29/52 (55%)
Query: 172 IPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
I +L++ +G+ V++P+ + YN F+ K M+ FA++F A+ R
Sbjct: 1 AGPIGHALVATGVGIAVAVPAVLIYNFFLRRLKLAVADMDDFAHDFDALAQR 52
>gi|259417628|ref|ZP_05741547.1| MotA/TolQ/ExbB proton channel [Silicibacter sp. TrichCH4B]
gi|259346534|gb|EEW58348.1| MotA/TolQ/ExbB proton channel [Silicibacter sp. TrichCH4B]
Length = 208
Score = 59.8 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 37/196 (18%), Positives = 73/196 (37%), Gaps = 14/196 (7%)
Query: 21 GLAVKCIITLLFIFSILSWSVIIQKSVNFITL---RRQFREFEQLFWSGQSLETVCKSLK 77
+ L + S+ SV I K + F L +RQ E W E +
Sbjct: 3 DPLTLVVFAALGVMSLTVLSVFIFKLLQFSRLGVGKRQMAEQIINTWLSGQAEAAMQQAA 62
Query: 78 NHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGS 137
++ L+ I + + G R+ G + + EL +++++ L
Sbjct: 63 ARKSV-LSRILHAVFT--------GLRARPGETAYAEELGRQTAISELATLSDRIRLLEI 113
Query: 138 MSSAGLLVGILGAVLGMMGFFQSIAGYY--SNNVVSIPGIIESLISILLGLCVSIPSSIA 195
A ++G+LG V+GM+ F +A ++ GI +L + GL V++ +
Sbjct: 114 AVHAAPMLGLLGTVIGMIDAFSVLAQTQAAADPAALAGGIWTALTTTAAGLAVALVAYFL 173
Query: 196 YNKFIEDSKKFAMQME 211
+ ++ +E
Sbjct: 174 TSWLDARIERERNLIE 189
>gi|59713377|ref|YP_206152.1| TolQ protein [Vibrio fischeri ES114]
gi|59481625|gb|AAW87264.1| TolQ protein [Vibrio fischeri ES114]
Length = 169
Score = 59.8 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 17/92 (18%), Positives = 44/92 (47%), Gaps = 1/92 (1%)
Query: 121 IARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSN-NVVSIPGIIESL 179
I+ ++ + L+F+ + + ++G+LG V GM+ F +A S+ + GI +
Sbjct: 71 ISEAHLQLNQYLNFIKVLVAICPMLGLLGTVTGMISVFDVMANQGSSQPKLMASGISLAT 130
Query: 180 ISILLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
+ + G+ ++ + + + ++ Q+E
Sbjct: 131 LPTMAGMVAALAGMFVHARLAKVCRRKEHQLE 162
>gi|254506784|ref|ZP_05118924.1| TonB system transport protein ExbB2 [Vibrio parahaemolyticus 16]
gi|219550365|gb|EED27350.1| TonB system transport protein ExbB2 [Vibrio parahaemolyticus 16]
Length = 184
Score = 59.8 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 22/93 (23%), Positives = 48/93 (51%), Gaps = 1/93 (1%)
Query: 121 IARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-VVSIPGIIESL 179
IA+ E+ + LS + + + ++G+LG V GM+ F +A S+N + GI +
Sbjct: 86 IAKAQIELRQNLSTIKVLVAICPMLGLLGTVTGMIAVFDVMATQGSSNPKLMASGISLAT 145
Query: 180 ISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEG 212
+ + G+ ++ A+ + + ++ A+Q+E
Sbjct: 146 LPTMAGMVAALAGMFAHARLSKVCQRKALQLEQ 178
>gi|323492746|ref|ZP_08097890.1| TonB system transport protein ExbB3 [Vibrio brasiliensis LMG 20546]
gi|323313121|gb|EGA66241.1| TonB system transport protein ExbB3 [Vibrio brasiliensis LMG 20546]
Length = 185
Score = 59.8 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 37/206 (17%), Positives = 79/206 (38%), Gaps = 50/206 (24%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFI----TLRRQFREFEQLFWSG 66
+S FMQ G ++ L +LSW ++I++ V LR+Q W
Sbjct: 18 LSALQQFMQQGGQ---VLWWLAAVVLLSWVILIERIVFLWFHFPKLRKQ--------W-- 64
Query: 67 QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
++ W + D + I+D + A A
Sbjct: 65 -------------------------VAAWHQRSDHDSWYARSIRDG---WLSEAHAV--- 93
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-VVSIPGIIESLISILLG 185
+ + L+ + + + ++G+LG V GM+ F +A S+N + GI + + + G
Sbjct: 94 -LYQNLNIIKVLVAICPMLGLLGTVTGMISVFDVMANQGSSNPKLMASGISLATLPTMAG 152
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQME 211
+ ++ +Y + ++ + +++E
Sbjct: 153 MVAALTGMFSYARLVKACQMKEIKLE 178
>gi|261856737|ref|YP_003264020.1| tonB-system energizer ExbB [Halothiobacillus neapolitanus c2]
gi|261837206|gb|ACX96973.1| tonB-system energizer ExbB [Halothiobacillus neapolitanus c2]
Length = 146
Score = 59.8 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 1/83 (1%)
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
+T L+ L S+ + VG+LG VLG++ F + + G+ +L + LGL
Sbjct: 53 LTHNLTTLSSIGANAPYVGLLGTVLGILLTFHQLGTSGQIAANQIMLGLALALKATALGL 112
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQ 209
V+IP+ + YN F+ +
Sbjct: 113 VVAIPAILIYNGFLRRIDVLTAR 135
>gi|325528364|gb|EGD05512.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. TJI49]
Length = 73
Score = 59.8 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 12/67 (17%), Positives = 23/67 (34%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
+ + +L S+ SW ++ K+ + +RQ FW SL+
Sbjct: 7 VVHYLESGDAITHAVAYVLLAMSVASWCFLLMKAWLLVRAKRQGPRALAAFWHAPSLDAG 66
Query: 73 CKSLKNH 79
+L
Sbjct: 67 IAALSGA 73
>gi|221135393|ref|ZP_03561696.1| MotA/TolQ/ExbB proton channel [Glaciecola sp. HTCC2999]
Length = 452
Score = 59.8 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 30/143 (20%), Positives = 61/143 (42%), Gaps = 8/143 (5%)
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+ LKN N A + + + + ++ +D AI REL I
Sbjct: 301 SKISAQLKNAANPSDANPLGRILKVYH-------DNKSADTENLELKLDEAILRELPSID 353
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCV 188
++ + ++ L+G+LG VLGM+ FQ I + + + + G I +L++ G+
Sbjct: 354 SGINIIKIFAAIAPLLGLLGTVLGMIATFQQITLFGTGDPRIMAGSISMALVTTAQGIIA 413
Query: 189 SIPSSIAYNKFIEDSKKFAMQME 211
++P + ++ SK ++
Sbjct: 414 ALPLILTHSIVAGRSKSIVHILD 436
>gi|90415505|ref|ZP_01223439.1| TonB system biopolymer transport component [marine gamma
proteobacterium HTCC2207]
gi|90332828|gb|EAS47998.1| TonB system biopolymer transport component [marine gamma
proteobacterium HTCC2207]
Length = 174
Score = 59.8 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 24/194 (12%), Positives = 71/194 (36%), Gaps = 43/194 (22%)
Query: 20 MGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNH 79
G+ + I+ LLF+ W+++ ++ ++
Sbjct: 17 GGMVLWAIVVLLFVM----WTLLFERMWYLKSV--------------------------- 45
Query: 80 HNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMS 139
++ A+ W++ ++ ++ I++++ I+ +I E + + ++
Sbjct: 46 ----VSQDVQYALDAWEERSERKSKRARQIREKL-------ISEVSVKIDENIMMIKTLV 94
Query: 140 SAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNK 198
+ L G+LG V GM+ F +A + G+ ++ + + G+ ++
Sbjct: 95 ALAPLFGLLGTVTGMIVVFDVMAFTGGGDAKAMAGGVSQATVPTMSGMVAALSGVFGITY 154
Query: 199 FIEDSKKFAMQMEG 212
+++ +E
Sbjct: 155 VERAAEREKHLLED 168
>gi|88857886|ref|ZP_01132528.1| TonB system transport protein ExbB2 [Pseudoalteromonas tunicata D2]
gi|88819503|gb|EAR29316.1| TonB system transport protein ExbB2 [Pseudoalteromonas tunicata D2]
Length = 174
Score = 59.8 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 26/189 (13%), Positives = 61/189 (32%), Gaps = 43/189 (22%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLET 71
S+ G + + LF+ W ++I++ + R W +
Sbjct: 10 SVRDFVATGGQVLYVVAIALFLM----WVLMIERYWFLTAEFPRMRNSIVASWDAR---- 61
Query: 72 VCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEK 131
R+ D I+ E++ ++
Sbjct: 62 ----------------------------------QDTTSWYAHRIRDAWISDAAEKLNQR 87
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSI 190
+ + ++ + L+G+LG V GM+ F+++A + N + GI + I + G+ ++
Sbjct: 88 MLLIKTLVAICPLIGLLGTVTGMIAVFETMANQGTGNARLMAAGISMATIPTMAGMVAAL 147
Query: 191 PSSIAYNKF 199
+
Sbjct: 148 SGVFFSTRL 156
>gi|117620189|ref|YP_858667.1| TonB system biopolymer transport component [Aeromonas hydrophila
subsp. hydrophila ATCC 7966]
gi|117561596|gb|ABK38544.1| TonB system biopolymer transport component [Aeromonas hydrophila
subsp. hydrophila ATCC 7966]
Length = 176
Score = 59.8 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 33/205 (16%), Positives = 74/205 (36%), Gaps = 50/205 (24%)
Query: 13 IFALFMQ-------MGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS 65
+F ++ Q G + I+ LL + W ++I++ +
Sbjct: 2 MFDIWQQLQSFMGRGGPVLWVILALLVLM----WILMIERLLYL---------------- 41
Query: 66 GQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
N+G A + + W+ ++ + I+ R + A
Sbjct: 42 ---------------NLGFAPLQRQLLGRWQARSERHSWHARAIR---GRWLAEAELE-- 81
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYS-NNVVSIPGIIESLISILL 184
+ L F+ ++ ++G+LG V GM+G F ++A N GI + I +
Sbjct: 82 --LNRHLIFIRTLVVLCPMLGLLGTVTGMIGVFDALAAANRFNPESMAGGISRATIPTMA 139
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQ 209
G+ V++ + ++ +K+ +
Sbjct: 140 GMVVALSGVLLLSRLESQAKRALAK 164
>gi|218781364|ref|YP_002432682.1| MotA/TolQ/ExbB proton channel [Desulfatibacillum alkenivorans
AK-01]
gi|218762748|gb|ACL05214.1| MotA/TolQ/ExbB proton channel [Desulfatibacillum alkenivorans
AK-01]
Length = 211
Score = 59.4 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 34/194 (17%), Positives = 78/194 (40%), Gaps = 17/194 (8%)
Query: 27 IITLLFIFSILSWSVIIQKSVNFITLRR-QFREFEQLFWSGQSLETVCKSLKNHHNIGLA 85
++ L + S+ +I K++ L R + W + + + G A
Sbjct: 22 VMIPLALTSLALGFLIAHKALVVFRLSRGDAGRAQAEEWVLRG-----RVEGPGNPHGAA 76
Query: 86 AIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLV 145
+ + A + + R GI +++ + + + L+ +G+++ L+
Sbjct: 77 RMMVQAFLARRTGQTEKDR---GILLEVEKALS-------TRLDDNLASIGALAGIAPLL 126
Query: 146 GILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISILLGLCVSIPSSIAYNKFIEDSK 204
G+LG VLGMM F ++ + + N ++ I E+L++ GL ++IP+ + +
Sbjct: 127 GLLGTVLGMMAAFDVLSAFGTGNAQAMAQSISEALVTTETGLLIAIPAVYMKAFLEKRVE 186
Query: 205 KFAMQMEGFANEFS 218
++ S
Sbjct: 187 NIKNRLSRIVIHLS 200
>gi|15606823|ref|NP_214203.1| biopolymer transport exbB [Aquifex aeolicus VF5]
gi|3913619|sp|O67637|EXBB_AQUAE RecName: Full=Biopolymer transport protein exbB
gi|2984051|gb|AAC07592.1| biopolymer transport exbB [Aquifex aeolicus VF5]
Length = 148
Score = 59.4 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 29/96 (30%), Positives = 51/96 (53%), Gaps = 1/96 (1%)
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYY-SNNVVSIPGIIESLI 180
A+ +E+T++L + +++S VG+LG VLG++ F I N + G+ +L
Sbjct: 47 AQLEKELTKRLYIIATVASNAPYVGLLGTVLGILLTFYIIGEKGIVNTKEIMVGLALALK 106
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANE 216
+ LGL V+IPS+I YN + ++ + E E
Sbjct: 107 ATALGLIVAIPSTILYNFLVRKVREKLLDWEAIHGE 142
>gi|269966636|ref|ZP_06180716.1| TonB system transport protein ExbB2 [Vibrio alginolyticus 40B]
gi|269828758|gb|EEZ83012.1| TonB system transport protein ExbB2 [Vibrio alginolyticus 40B]
Length = 153
Score = 59.4 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 21/93 (22%), Positives = 47/93 (50%), Gaps = 1/93 (1%)
Query: 121 IARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-VVSIPGIIESL 179
IA+ E+ + LS + + + ++G+LG V GM+ F +A S+N + GI +
Sbjct: 55 IAKAQIELRQNLSTIKLLVAVCPMLGLLGTVTGMITVFDVMASQGSSNPKLMASGISLAT 114
Query: 180 ISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEG 212
+ + G+ ++ + + + ++ A+Q+E
Sbjct: 115 LPTMAGMVAALAGMFIHARLSKVCERKAIQLEQ 147
>gi|325131714|gb|EGC54416.1| ExbB [Neisseria meningitidis M6190]
Length = 130
Score = 59.4 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 9/82 (10%), Positives = 31/82 (37%)
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
LA + + ++++ + + + + + ++A+ + ++ L S+ +
Sbjct: 48 LAQEALQSYRNYRRNEASELAHALPLNEYLVIQIRNSMAQIMRRFDYGMTALASIGATAP 107
Query: 144 LVGILGAVLGMMGFFQSIAGYY 165
+G+ G V G+
Sbjct: 108 FIGLFGTVWGIYHALIISGKAG 129
>gi|290954012|ref|ZP_06558633.1| TolQ protein [Francisella tularensis subsp. holarctica URFT1]
gi|295312601|ref|ZP_06803354.1| TolQ protein [Francisella tularensis subsp. holarctica URFT1]
Length = 64
Score = 59.4 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 14/54 (25%), Positives = 27/54 (50%)
Query: 175 IIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
+ E+LI+ LGL V+IP+ I ++K E F ++ +L ++ +
Sbjct: 1 MAEALIATALGLFVAIPAVIGHSKLSNQVDDILSSYESFQDDLCILLLKEAHRD 54
>gi|120599385|ref|YP_963959.1| MotA/TolQ/ExbB proton channel [Shewanella sp. W3-18-1]
gi|146292619|ref|YP_001183043.1| MotA/TolQ/ExbB proton channel [Shewanella putrefaciens CN-32]
gi|120559478|gb|ABM25405.1| MotA/TolQ/ExbB proton channel [Shewanella sp. W3-18-1]
gi|145564309|gb|ABP75244.1| MotA/TolQ/ExbB proton channel [Shewanella putrefaciens CN-32]
gi|319425923|gb|ADV53997.1| TonB mediated energy transduction system, inner membrane component,
ExbB [Shewanella putrefaciens 200]
Length = 175
Score = 59.4 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 24/210 (11%), Positives = 73/210 (34%), Gaps = 45/210 (21%)
Query: 6 LAIMDI--SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLF 63
L +MDI S+ G + + +LF+ W++++++ + + +
Sbjct: 3 LYLMDIWDSVRGFMASGGDVLWLVAAVLFLM----WALMLERYWYLNWISPKQHKAIIAA 58
Query: 64 WSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAR 123
W+ + R+ + +++
Sbjct: 59 WNARE--------------------------------------ETTSWYSHRIREAWMSQ 80
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISI 182
+++ ++ + ++ + ++G+LG V GM+ F +A ++N + GI + +
Sbjct: 81 AKQDLNARMLIIKTLVAICPMIGLLGTVTGMISVFDVMAVQGTSNARLMAAGISMATMPT 140
Query: 183 LLGLCVSIPSSIAYNKFIEDSKKFAMQMEG 212
+ G+ ++ + K +++
Sbjct: 141 MAGMVAALSGVFFSTRLDAKMKISLEKLKD 170
>gi|291286885|ref|YP_003503701.1| MotA/TolQ/ExbB proton channel [Denitrovibrio acetiphilus DSM 12809]
gi|290884045|gb|ADD67745.1| MotA/TolQ/ExbB proton channel [Denitrovibrio acetiphilus DSM 12809]
Length = 171
Score = 59.4 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 23/126 (18%), Positives = 52/126 (41%), Gaps = 6/126 (4%)
Query: 87 IFMSAMSEWKKSCDKGARSPIGIQDRI---DRMMDVAIARELEEITEKLSFLGSMSSAGL 143
I + + ++++ + + ++RI +V + I+ LS + +
Sbjct: 34 IVYAGL--FRRNSEGERSIAVLTRERIMSRGSSAEVELNIIGRMISRNLSVIKVSTVIAP 91
Query: 144 LVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISILLGLCVSIPSSIAYNKFIED 202
++G+LG V GM+ F I+ + + + GI ++L S LGL ++ +
Sbjct: 92 MLGLLGTVWGMLITFNIISDNGTGDPALMSDGISKALTSTRLGLTATVFGMLMAAVLERM 151
Query: 203 SKKFAM 208
+K
Sbjct: 152 RRKLTA 157
>gi|197337001|ref|YP_002157784.1| TolQ protein [Vibrio fischeri MJ11]
gi|197314253|gb|ACH63702.1| TolQ protein [Vibrio fischeri MJ11]
Length = 169
Score = 59.4 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 17/92 (18%), Positives = 44/92 (47%), Gaps = 1/92 (1%)
Query: 121 IARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSN-NVVSIPGIIESL 179
I+ ++ + L+F+ + + ++G+LG V GM+ F +A S+ + GI +
Sbjct: 71 ISEAHLQLNQYLNFIKVLVAICPMLGLLGTVTGMISVFDVMANQGSSQPKLMASGISLAT 130
Query: 180 ISILLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
+ + G+ ++ + + + ++ Q+E
Sbjct: 131 LPTMAGMVAALAGMFVHARLAKICRRKEHQLE 162
>gi|332994048|gb|AEF04103.1| TonB system biopolymer transport protein [Alteromonas sp. SN2]
Length = 174
Score = 59.4 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 29/194 (14%), Positives = 70/194 (36%), Gaps = 43/194 (22%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLET 71
S+ G + + LF+ W ++I++
Sbjct: 10 SVRDFIATGGDVLYFVAAALFLM----WVLMIERYWYLT--------------------- 44
Query: 72 VCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEK 131
++F + K+ D A + RI D I++ +++ +
Sbjct: 45 --------------SVFPTVKKNIIKNWDARADTTSWYAHRIR---DAWISQASDDLNAR 87
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSI 190
+ + ++ + L+G+LG V GM+G F+++A ++N + GI + + + G+ ++
Sbjct: 88 MLIIRTIIAMCPLIGLLGTVTGMIGVFETMATQGTSNARLMAAGISMATVPTMAGMVAAL 147
Query: 191 PSSIAYNKFIEDSK 204
++ K
Sbjct: 148 SGLFISSRLEAKVK 161
>gi|239995528|ref|ZP_04716052.1| TonB system biopolymer transport component [Alteromonas macleodii
ATCC 27126]
Length = 169
Score = 59.4 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 25/194 (12%), Positives = 67/194 (34%), Gaps = 43/194 (22%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLET 71
S+ G + + LF+ W ++I++ ++ + ++ W +
Sbjct: 10 SVRDFIATGGDVLYFVAAALFLM----WVLMIERYWYLTSVFPKVKKNIIANWDAR---- 61
Query: 72 VCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEK 131
R+ D I++ +++ +
Sbjct: 62 ----------------------------------ADTTSWYAHRIRDAWISQASDDLNAR 87
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSI 190
+ + ++ + L+G+LG V GM+ F+++A ++N + GI + I + G+ ++
Sbjct: 88 MLIIRTIIAMCPLIGLLGTVTGMISVFETMATQGTSNARLMAAGISMATIPTMAGMVAAL 147
Query: 191 PSSIAYNKFIEDSK 204
++ K
Sbjct: 148 SGLFISSRLEAKVK 161
>gi|254848667|ref|ZP_05238017.1| TonB system transport protein ExbB2 [Vibrio cholerae MO10]
gi|255745017|ref|ZP_05418967.1| ferric siderophore transport system biopolymer transport protein
ExbB [Vibrio cholera CIRS 101]
gi|3811312|gb|AAC69454.1| ExbB2 [Vibrio cholerae]
gi|254844372|gb|EET22786.1| TonB system transport protein ExbB2 [Vibrio cholerae MO10]
gi|255737488|gb|EET92883.1| ferric siderophore transport system biopolymer transport protein
ExbB [Vibrio cholera CIRS 101]
Length = 179
Score = 59.4 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 16/110 (14%), Positives = 44/110 (40%), Gaps = 2/110 (1%)
Query: 105 SPIGIQDRIDRMMDVA-IARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAG 163
R + + + + L+ + + + ++G+LG V GM+ F +A
Sbjct: 64 QRADQHSWFARSIREQWLGEAHNALNQNLNLIKVLVAICPMLGLLGTVTGMISVFDVMAT 123
Query: 164 YYSNN-VVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEG 212
S++ + GI + + + G+ ++ + + + + M++E
Sbjct: 124 QGSSDPKLMASGISLATLPTMAGMVAALAGLFVHARLSKTCRGLEMKLEQ 173
>gi|254483606|ref|ZP_05096829.1| transporter, MotA/TolQ/ExbB proton channel family, putative [marine
gamma proteobacterium HTCC2148]
gi|214036115|gb|EEB76799.1| transporter, MotA/TolQ/ExbB proton channel family, putative [marine
gamma proteobacterium HTCC2148]
Length = 172
Score = 59.0 bits (142), Expect = 4e-07, Method: Composition-based stats.
Identities = 32/194 (16%), Positives = 67/194 (34%), Gaps = 43/194 (22%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
+ + G + I LLF+ W++I ++ Q W V
Sbjct: 8 LLGFMDKGGDVLWLIAALLFVM----WTLIFERIWYL-----------QFGWK----NDV 48
Query: 73 CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKL 132
+ + W+ ++ + I R M V+ AR +I L
Sbjct: 49 AQVIGK----------------WEGRSERKSWEAEQI-----RAMLVSQAR--MQINRNL 85
Query: 133 SFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIP 191
+ ++ + L+G+LG V GM+ F +A + G+ ++ I + G+ ++
Sbjct: 86 PVIKTLVALCPLLGLLGTVTGMIEVFNIMAVTGGGDAKSMAGGVQQATIPTMAGMVAALS 145
Query: 192 SSIAYNKFIEDSKK 205
A +++
Sbjct: 146 GVFANTYVTRIAQR 159
>gi|209808939|ref|YP_002264477.1| TonB system transport protein ExbB2 [Aliivibrio salmonicida
LFI1238]
gi|208010501|emb|CAQ80867.1| TonB system transport protein ExbB2 [Aliivibrio salmonicida
LFI1238]
Length = 169
Score = 59.0 bits (142), Expect = 4e-07, Method: Composition-based stats.
Identities = 15/92 (16%), Positives = 43/92 (46%), Gaps = 1/92 (1%)
Query: 121 IARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSN-NVVSIPGIIESL 179
++ ++ + L+F+ + + ++G+LG V GM+ F +A S+ + GI +
Sbjct: 71 VSEAHLQLNQYLNFIKVLVAICPMLGLLGTVTGMISVFDVMANQGSSQPKLMASGISLAT 130
Query: 180 ISILLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
+ + G+ ++ + + + ++ +E
Sbjct: 131 LPTMAGMVAALAGMFVHARLAKVCRRKEHHLE 162
>gi|297579114|ref|ZP_06941042.1| TonB system transporter ExbB2 [Vibrio cholerae RC385]
gi|297536708|gb|EFH75541.1| TonB system transporter ExbB2 [Vibrio cholerae RC385]
Length = 180
Score = 59.0 bits (142), Expect = 4e-07, Method: Composition-based stats.
Identities = 16/110 (14%), Positives = 44/110 (40%), Gaps = 2/110 (1%)
Query: 105 SPIGIQDRIDRMMDVA-IARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAG 163
R + + + + L+ + + + ++G+LG V GM+ F +A
Sbjct: 65 QRADQHSWFARSIREQWLGEAHNALNQNLNLIKVLVAICPMLGLLGTVTGMISVFDVMAT 124
Query: 164 YYSNN-VVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEG 212
S++ + GI + + + G+ ++ + + + + M++E
Sbjct: 125 QGSSDPKLMASGISLATLPTMAGMVAALAGLFVHARLSKTCRGLEMKLEQ 174
>gi|85711176|ref|ZP_01042236.1| TonB system biopolymer transport component [Idiomarina baltica
OS145]
gi|85695089|gb|EAQ33027.1| TonB system biopolymer transport component [Idiomarina baltica
OS145]
Length = 176
Score = 59.0 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 35/197 (17%), Positives = 75/197 (38%), Gaps = 42/197 (21%)
Query: 17 FMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSL 76
F++ G V +I +L IFS+ W +I+++ F R+
Sbjct: 14 FIEAGGHVLLVIGIL-IFSM--WLMILERIFYFFNGHRKA-------------------- 50
Query: 77 KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLG 136
A WK+ DK + + I+ + I+R + L +
Sbjct: 51 -----------VKDARKRWKERDDKSSWNAEQIRQAM-------ISRVALGLGGNLPVIK 92
Query: 137 SMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIA 195
++ + L+G++G V GM+ F +A + + G+ ++ I + G+ ++ A
Sbjct: 93 ALVALCPLLGLMGTVTGMIEVFDVMAITGTGSARSMAAGVSKATIPTMAGMVGALSGVFA 152
Query: 196 YNKFIEDSKKFAMQMEG 212
+++ M++E
Sbjct: 153 ATWLQRTTRRERMKLED 169
>gi|156972957|ref|YP_001443864.1| biopolymer transport protein [Vibrio harveyi ATCC BAA-1116]
gi|156524551|gb|ABU69637.1| hypothetical protein VIBHAR_00635 [Vibrio harveyi ATCC BAA-1116]
Length = 175
Score = 59.0 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 37/197 (18%), Positives = 71/197 (36%), Gaps = 42/197 (21%)
Query: 17 FMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSL 76
F+ MG V +I +L S + W+V++++ F + + + FW +S
Sbjct: 14 FLGMGGDVLVVIFIL---SFMLWAVLLERWFYFAAVAPKAMKKAVSFWEERS-------- 62
Query: 77 KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLG 136
E K K R I + I+ + L +
Sbjct: 63 -----------------EHKSWNAKMIRQEIVSRQDIEN-------------KKGLPIVK 92
Query: 137 SMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIA 195
+ + L+G+LG V+GM+ F +A + + GI ++ I L G+ S+
Sbjct: 93 VLIALCPLLGLLGTVVGMIQVFDILAVTGTGSPRAMASGISKATIPTLAGMVASLSGLFF 152
Query: 196 YNKFIEDSKKFAMQMEG 212
+ +K ++E
Sbjct: 153 STRLDHLAKVTTQKLED 169
>gi|119475461|ref|ZP_01615814.1| putative TonB system-dependent transport protein [marine gamma
proteobacterium HTCC2143]
gi|119451664|gb|EAW32897.1| putative TonB system-dependent transport protein [marine gamma
proteobacterium HTCC2143]
Length = 174
Score = 59.0 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 17/96 (17%), Positives = 39/96 (40%), Gaps = 1/96 (1%)
Query: 118 DVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGII 176
I+ +I L + ++ + L G+LG V GM+ F +A + G+
Sbjct: 73 RQLISEAQLKIRSGLPMIKTLVALAPLFGLLGTVTGMIEVFNIMAVTGGGDAKSMAGGVS 132
Query: 177 ESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEG 212
++ I + G+ ++ A + + + + +E
Sbjct: 133 KATIPTMAGMVAALSGVFADTYVSQIADRESTLLED 168
>gi|86146649|ref|ZP_01064970.1| TolQ protein [Vibrio sp. MED222]
gi|218676445|ref|YP_002395264.1| putative TonB system transport protein [Vibrio splendidus LGP32]
gi|85835496|gb|EAQ53633.1| TolQ protein [Vibrio sp. MED222]
gi|218324713|emb|CAV26341.1| putative TonB system transport protein [Vibrio splendidus LGP32]
Length = 186
Score = 59.0 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 15/85 (17%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-VVSIPGIIESLISILLGL 186
+ + L+F+ + + ++G+LG V GM+ F +A S++ + GI + + + G+
Sbjct: 95 LNQNLNFIKLLVAICPMLGLLGTVTGMISVFDVMATQGSSDPKLMASGISLATLPTMAGM 154
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQME 211
++ + + + + +++E
Sbjct: 155 VAALAGMFVHARLAKVCNRLELKLE 179
>gi|294141735|ref|YP_003557713.1| TonB system transport protein ExbB2 [Shewanella violacea DSS12]
gi|293328204|dbj|BAJ02935.1| TonB system transport protein ExbB2 [Shewanella violacea DSS12]
Length = 175
Score = 59.0 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 28/210 (13%), Positives = 71/210 (33%), Gaps = 45/210 (21%)
Query: 6 LAIMDI--SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLF 63
L +MDI S+ G + + +LF+ W +++++
Sbjct: 3 LYLMDIWDSVRGFMAAGGDVLWLVAAVLFVM----WVLMLERYWYLN------------- 45
Query: 64 WSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAR 123
W + E K R+ + I++
Sbjct: 46 WISPN-------------------------EHKAIISSWDAREDSTSWYAHRIRESWISQ 80
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISI 182
+ + ++ F+ ++ + ++G+LG V GM+ F +A + ++N + GI + +
Sbjct: 81 AKQNLNARMLFIKTLVAICPMIGLLGTVTGMISVFDVMAVHGTSNARMMAAGISMATMPT 140
Query: 183 LLGLCVSIPSSIAYNKFIEDSKKFAMQMEG 212
+ G+ ++ + K +++
Sbjct: 141 MAGMVAALSGVFFSTRLDAKMKISLEKLKD 170
>gi|117617985|ref|YP_857925.1| TonB system transport protein ExbB2 [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
gi|117559392|gb|ABK36340.1| TonB system transport protein ExbB2 [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
Length = 175
Score = 59.0 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 16/96 (16%), Positives = 43/96 (44%), Gaps = 1/96 (1%)
Query: 118 DVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGII 176
++R + + + + + + L+G+LG V+GM+ F ++A + + GI
Sbjct: 75 RELVSRVAMAVDKGMPVIKVLIALCPLMGLLGTVVGMVQVFDTLAITGTGSPRAMASGIS 134
Query: 177 ESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEG 212
++ + + G+ ++ N+ +K ++E
Sbjct: 135 KATVPTMAGMIAALSGLFFVNQLDHKAKLAVEKLED 170
>gi|15641554|ref|NP_231186.1| TonB system transport protein ExbB2 [Vibrio cholerae O1 biovar El
Tor str. N16961]
gi|121587233|ref|ZP_01677007.1| TonB system transport protein ExbB2 [Vibrio cholerae 2740-80]
gi|121726894|ref|ZP_01680095.1| TonB system transport protein ExbB2 [Vibrio cholerae V52]
gi|147675745|ref|YP_001217098.1| TonB system transport protein ExbB2 [Vibrio cholerae O395]
gi|153213373|ref|ZP_01948762.1| TonB system transport protein ExbB2 [Vibrio cholerae 1587]
gi|153802645|ref|ZP_01957231.1| TonB system transport protein ExbB2 [Vibrio cholerae MZO-3]
gi|153818896|ref|ZP_01971563.1| TonB system transport protein ExbB2 [Vibrio cholerae NCTC 8457]
gi|153823115|ref|ZP_01975782.1| TonB system transport protein ExbB2 [Vibrio cholerae B33]
gi|153824792|ref|ZP_01977459.1| TonB system transport protein ExbB2 [Vibrio cholerae MZO-2]
gi|153830000|ref|ZP_01982667.1| TonB system transport protein ExbB2 [Vibrio cholerae 623-39]
gi|227081701|ref|YP_002810252.1| TonB system transport protein ExbB2 [Vibrio cholerae M66-2]
gi|229508507|ref|ZP_04398010.1| ferric siderophore transport system biopolymer transport protein
ExbB [Vibrio cholerae BX 330286]
gi|229511423|ref|ZP_04400902.1| ferric siderophore transport system biopolymer transport protein
ExbB [Vibrio cholerae B33]
gi|229514949|ref|ZP_04404409.1| ferric siderophore transport system biopolymer transport protein
ExbB [Vibrio cholerae TMA 21]
gi|229518562|ref|ZP_04408005.1| ferric siderophore transport system biopolymer transport protein
ExbB [Vibrio cholerae RC9]
gi|229523633|ref|ZP_04413038.1| ferric siderophore transport system biopolymer transport protein
ExbB [Vibrio cholerae bv. albensis VL426]
gi|229529415|ref|ZP_04418805.1| ferric siderophore transport system biopolymer transport protein
ExbB [Vibrio cholerae 12129(1)]
gi|229607913|ref|YP_002878561.1| ferric siderophore transport system biopolymer transport protein
ExbB [Vibrio cholerae MJ-1236]
gi|254225264|ref|ZP_04918876.1| TonB system transport protein ExbB2 [Vibrio cholerae V51]
gi|254286394|ref|ZP_04961352.1| TonB system transport protein ExbB2 [Vibrio cholerae AM-19226]
gi|262161697|ref|ZP_06030715.1| ferric siderophore transport system biopolymer transport protein
ExbB [Vibrio cholerae INDRE 91/1]
gi|298498367|ref|ZP_07008174.1| TonB system transporter ExbB2 [Vibrio cholerae MAK 757]
gi|9656052|gb|AAF94700.1| TonB system transport protein ExbB2 [Vibrio cholerae O1 biovar El
Tor str. N16961]
gi|121548576|gb|EAX58630.1| TonB system transport protein ExbB2 [Vibrio cholerae 2740-80]
gi|121630656|gb|EAX63043.1| TonB system transport protein ExbB2 [Vibrio cholerae V52]
gi|124116026|gb|EAY34846.1| TonB system transport protein ExbB2 [Vibrio cholerae 1587]
gi|124121818|gb|EAY40561.1| TonB system transport protein ExbB2 [Vibrio cholerae MZO-3]
gi|125622105|gb|EAZ50427.1| TonB system transport protein ExbB2 [Vibrio cholerae V51]
gi|126510566|gb|EAZ73160.1| TonB system transport protein ExbB2 [Vibrio cholerae NCTC 8457]
gi|126519370|gb|EAZ76593.1| TonB system transport protein ExbB2 [Vibrio cholerae B33]
gi|146317628|gb|ABQ22167.1| TonB system transport protein ExbB2 [Vibrio cholerae O395]
gi|148874536|gb|EDL72671.1| TonB system transport protein ExbB2 [Vibrio cholerae 623-39]
gi|149741510|gb|EDM55540.1| TonB system transport protein ExbB2 [Vibrio cholerae MZO-2]
gi|150423561|gb|EDN15504.1| TonB system transport protein ExbB2 [Vibrio cholerae AM-19226]
gi|227009589|gb|ACP05801.1| TonB system transport protein ExbB2 [Vibrio cholerae M66-2]
gi|227013458|gb|ACP09668.1| TonB system transport protein ExbB2 [Vibrio cholerae O395]
gi|229333189|gb|EEN98675.1| ferric siderophore transport system biopolymer transport protein
ExbB [Vibrio cholerae 12129(1)]
gi|229337214|gb|EEO02231.1| ferric siderophore transport system biopolymer transport protein
ExbB [Vibrio cholerae bv. albensis VL426]
gi|229343251|gb|EEO08226.1| ferric siderophore transport system biopolymer transport protein
ExbB [Vibrio cholerae RC9]
gi|229347654|gb|EEO12613.1| ferric siderophore transport system biopolymer transport protein
ExbB [Vibrio cholerae TMA 21]
gi|229351388|gb|EEO16329.1| ferric siderophore transport system biopolymer transport protein
ExbB [Vibrio cholerae B33]
gi|229354461|gb|EEO19384.1| ferric siderophore transport system biopolymer transport protein
ExbB [Vibrio cholerae BX 330286]
gi|229370568|gb|ACQ60991.1| ferric siderophore transport system biopolymer transport protein
ExbB [Vibrio cholerae MJ-1236]
gi|262028429|gb|EEY47084.1| ferric siderophore transport system biopolymer transport protein
ExbB [Vibrio cholerae INDRE 91/1]
gi|297542700|gb|EFH78750.1| TonB system transporter ExbB2 [Vibrio cholerae MAK 757]
Length = 180
Score = 59.0 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 16/110 (14%), Positives = 44/110 (40%), Gaps = 2/110 (1%)
Query: 105 SPIGIQDRIDRMMDVA-IARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAG 163
R + + + + L+ + + + ++G+LG V GM+ F +A
Sbjct: 65 QRADQHSWFARSIREQWLGEAHNALNQNLNLIKVLVAICPMLGLLGTVTGMISVFDVMAT 124
Query: 164 YYSNN-VVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEG 212
S++ + GI + + + G+ ++ + + + + M++E
Sbjct: 125 QGSSDPKLMASGISLATLPTMAGMVAALAGLFVHARLSKTCRGLEMKLEQ 174
>gi|229520579|ref|ZP_04410003.1| ferric siderophore transport system biopolymer transport protein
ExbB [Vibrio cholerae TM 11079-80]
gi|229342403|gb|EEO07397.1| ferric siderophore transport system biopolymer transport protein
ExbB [Vibrio cholerae TM 11079-80]
Length = 180
Score = 59.0 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 16/110 (14%), Positives = 44/110 (40%), Gaps = 2/110 (1%)
Query: 105 SPIGIQDRIDRMMDVA-IARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAG 163
R + + + + L+ + + + ++G+LG V GM+ F +A
Sbjct: 65 QRADQHSWFARSIREQWLGEAHNALNQNLNLIKVLVAICPMLGLLGTVTGMISVFDVMAT 124
Query: 164 YYSNN-VVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEG 212
S++ + GI + + + G+ ++ + + + + M++E
Sbjct: 125 QGSSDPKLMASGISLATLPTMAGMVAALAGLFVHARLSKTCRGLEMKLEQ 174
>gi|56461217|ref|YP_156498.1| TonB system biopolymer transport component [Idiomarina loihiensis
L2TR]
gi|56180227|gb|AAV82949.1| TonB system biopolymer transport component [Idiomarina loihiensis
L2TR]
Length = 176
Score = 59.0 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 20/122 (16%), Positives = 52/122 (42%), Gaps = 4/122 (3%)
Query: 92 MSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAV 151
+ E ++ + ++I + M I+R + L + ++ + L+G++G V
Sbjct: 51 VKETRQRWQQREDKSSWNAEQIRQAM---ISRVSLALGGNLPIIKALVALCPLLGLMGTV 107
Query: 152 LGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQM 210
GM+ F +A + + G+ ++ I + G+ ++ A +++ M++
Sbjct: 108 TGMIEVFDVMAVTGTGSARSMASGVSKATIPTMAGMVGALSGVFAATWLQRTTRRERMKL 167
Query: 211 EG 212
E
Sbjct: 168 ED 169
>gi|153833920|ref|ZP_01986587.1| TonB system transport protein ExbB2 [Vibrio harveyi HY01]
gi|148869758|gb|EDL68735.1| TonB system transport protein ExbB2 [Vibrio harveyi HY01]
Length = 175
Score = 58.7 bits (141), Expect = 5e-07, Method: Composition-based stats.
Identities = 37/197 (18%), Positives = 71/197 (36%), Gaps = 42/197 (21%)
Query: 17 FMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSL 76
F+ MG V +I +L S + W+V++++ F + + + FW +S
Sbjct: 14 FLGMGGDVLVVIFIL---SFMLWAVLLERWFYFAAVAPKAMKKAVSFWEERS-------- 62
Query: 77 KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLG 136
E K K R I + I+ + L +
Sbjct: 63 -----------------EHKSWNAKMIRQEIVSRQDIEN-------------KKGLPIVK 92
Query: 137 SMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIA 195
+ + L+G+LG V+GM+ F +A + + GI ++ I L G+ S+
Sbjct: 93 VLIALCPLLGLLGTVVGMIQVFDILAVTGTGSPRAMASGISKATIPTLAGMVASLSGLFF 152
Query: 196 YNKFIEDSKKFAMQMEG 212
+ +K ++E
Sbjct: 153 STRLDHLAKVTTQKLED 169
>gi|261415311|ref|YP_003248994.1| MotA/TolQ/ExbB proton channel [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|261371767|gb|ACX74512.1| MotA/TolQ/ExbB proton channel [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|302325879|gb|ADL25080.1| MotA/TolQ/ExbB proton channel family protein [Fibrobacter
succinogenes subsp. succinogenes S85]
Length = 234
Score = 58.7 bits (141), Expect = 6e-07, Method: Composition-based stats.
Identities = 33/196 (16%), Positives = 79/196 (40%), Gaps = 13/196 (6%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFIT--LRRQFREFEQLFWSGQSLETVCKSLKNHHNIG 83
++ + + ++ + + + R+ + + G + +++ +
Sbjct: 21 VVMLPILLSGVVGFYFLFSSWFRIGSDFFRKDITKVVRRMQRGLT---GERAVVGTESSS 77
Query: 84 LAAIFMSAMSEWKK-----SCDKGARSPIGIQDRIDRM--MDVAIARELEEITEKLSFLG 136
+ ++ +K S + I ++ + M V + + + + + +
Sbjct: 78 DEQRVQTTLTNLRKRGGFLSRELSYAIEIAQKNYDEFRDYMQVRMMKSVRYMEQGNHIVS 137
Query: 137 SMSSAGLLVGILGAVLGMMGFFQSIAGYY-SNNVVSIPGIIESLISILLGLCVSIPSSIA 195
M++A L+G+LG V GM+ F+ I Y N V+ GI E+LIS GL ++ P ++
Sbjct: 138 VMAAAAPLLGLLGTVTGMVSTFEVITLYGNQNPVLMADGISEALISTQSGLLIAFPLTLM 197
Query: 196 YNKFIEDSKKFAMQME 211
+ E + +ME
Sbjct: 198 KQRLDERIEILKQEME 213
>gi|160874781|ref|YP_001554097.1| MotA/TolQ/ExbB proton channel [Shewanella baltica OS195]
gi|160860303|gb|ABX48837.1| MotA/TolQ/ExbB proton channel [Shewanella baltica OS195]
gi|315267019|gb|ADT93872.1| MotA/TolQ/ExbB proton channel [Shewanella baltica OS678]
Length = 175
Score = 58.7 bits (141), Expect = 6e-07, Method: Composition-based stats.
Identities = 24/210 (11%), Positives = 71/210 (33%), Gaps = 45/210 (21%)
Query: 6 LAIMDI--SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLF 63
L +MDI S+ G + + +LF+ W +++++ + + +
Sbjct: 3 LYLMDIWDSVRGFMASGGDVLWLVAGVLFLM----WVLMLERYWYLNWISPKQHKAIIAA 58
Query: 64 WSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAR 123
W + R+ + +++
Sbjct: 59 WDARE--------------------------------------ETTSWYAHRIREAWMSQ 80
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISI 182
+++ ++ + ++ + ++G+LG V GM+ F +A ++N + GI + +
Sbjct: 81 AKQDLNARMLIIKTLVAICPMIGLLGTVTGMISVFDVMAVQGTSNARLMAAGISMATMPT 140
Query: 183 LLGLCVSIPSSIAYNKFIEDSKKFAMQMEG 212
+ G+ ++ + K +++
Sbjct: 141 MAGMVAALSGVFFSTRLDAKMKISLEKLKD 170
>gi|84393271|ref|ZP_00992032.1| TolQ protein [Vibrio splendidus 12B01]
gi|84376096|gb|EAP92983.1| TolQ protein [Vibrio splendidus 12B01]
Length = 186
Score = 58.7 bits (141), Expect = 6e-07, Method: Composition-based stats.
Identities = 15/85 (17%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-VVSIPGIIESLISILLGL 186
+ + L+F+ + + ++G+LG V GM+ F +A S++ + GI + + + G+
Sbjct: 95 LNQNLNFIKLLVAICPMLGLLGTVTGMISVFDVMATQGSSDPKLMASGISLATLPTMAGM 154
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQME 211
++ + + + + +++E
Sbjct: 155 VAALAGMFVHARLAKVCNRLELKLE 179
>gi|163803223|ref|ZP_02197104.1| TonB system transport protein ExbB2 [Vibrio sp. AND4]
gi|159172978|gb|EDP57814.1| TonB system transport protein ExbB2 [Vibrio sp. AND4]
Length = 184
Score = 58.7 bits (141), Expect = 6e-07, Method: Composition-based stats.
Identities = 21/93 (22%), Positives = 47/93 (50%), Gaps = 1/93 (1%)
Query: 121 IARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-VVSIPGIIESL 179
IA+ E+ + LS + + + ++G+LG V GM+ F +A S+N + GI +
Sbjct: 86 IAKAHTELRQNLSTIKVLVAICPMLGLLGTVTGMITVFDVMATQGSSNPKLMASGISLAT 145
Query: 180 ISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEG 212
+ + G+ ++ + + + ++ A+Q+E
Sbjct: 146 LPTMAGMVAALAGMFVHARLSKVCERKALQLEQ 178
>gi|153000154|ref|YP_001365835.1| MotA/TolQ/ExbB proton channel [Shewanella baltica OS185]
gi|217973878|ref|YP_002358629.1| MotA/TolQ/ExbB proton channel [Shewanella baltica OS223]
gi|304409745|ref|ZP_07391365.1| MotA/TolQ/ExbB proton channel [Shewanella baltica OS183]
gi|307304101|ref|ZP_07583854.1| MotA/TolQ/ExbB proton channel [Shewanella baltica BA175]
gi|151364772|gb|ABS07772.1| MotA/TolQ/ExbB proton channel [Shewanella baltica OS185]
gi|217499013|gb|ACK47206.1| MotA/TolQ/ExbB proton channel [Shewanella baltica OS223]
gi|304352263|gb|EFM16661.1| MotA/TolQ/ExbB proton channel [Shewanella baltica OS183]
gi|306912999|gb|EFN43422.1| MotA/TolQ/ExbB proton channel [Shewanella baltica BA175]
Length = 175
Score = 58.7 bits (141), Expect = 6e-07, Method: Composition-based stats.
Identities = 24/210 (11%), Positives = 71/210 (33%), Gaps = 45/210 (21%)
Query: 6 LAIMDI--SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLF 63
L +MDI S+ G + + +LF+ W +++++ + + +
Sbjct: 3 LYLMDIWDSVRGFMASGGDVLWLVAAVLFLM----WVLMLERYWYLNWISPKQHKAIIAA 58
Query: 64 WSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAR 123
W + R+ + +++
Sbjct: 59 WDARE--------------------------------------ETTSWYAHRIREAWMSQ 80
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISI 182
+++ ++ + ++ + ++G+LG V GM+ F +A ++N + GI + +
Sbjct: 81 AKQDLNARMLIIKTLVAICPMIGLLGTVTGMISVFDVMAVQGTSNARLMAAGISMATMPT 140
Query: 183 LLGLCVSIPSSIAYNKFIEDSKKFAMQMEG 212
+ G+ ++ + K +++
Sbjct: 141 MAGMVAALSGVFFSTRLDAKMKISLEKLKD 170
>gi|260778807|ref|ZP_05887699.1| ferric siderophore transport system biopolymer transport protein
ExbB [Vibrio coralliilyticus ATCC BAA-450]
gi|260604971|gb|EEX31266.1| ferric siderophore transport system biopolymer transport protein
ExbB [Vibrio coralliilyticus ATCC BAA-450]
Length = 185
Score = 58.7 bits (141), Expect = 6e-07, Method: Composition-based stats.
Identities = 18/110 (16%), Positives = 49/110 (44%), Gaps = 2/110 (1%)
Query: 104 RSPIGIQDRIDRMMDVA-IARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA 162
R R + +++ ++ + L+ + + + ++G+LG V GM+ F +A
Sbjct: 69 RERSDQTSWYARSIREGWLSQAHSQLYQNLNIIKVLVAICPMLGLLGTVTGMISVFDVMA 128
Query: 163 GYYSNN-VVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
S+N + GI + + + G+ ++ Y + ++ + +++E
Sbjct: 129 NQGSSNPKLMASGISLATLPTMAGMVGALTGMFFYARLVKACQLREIKLE 178
>gi|24217275|ref|NP_714758.1| MotA/ExbB proton channel family protein [Leptospira interrogans
serovar Lai str. 56601]
gi|45655752|ref|YP_003561.1| MotA/TolQ/ExbB proton channel family protein [Leptospira
interrogans serovar Copenhageni str. Fiocruz L1-130]
gi|24202337|gb|AAN51773.1| TolQ-like transport protein [Leptospira interrogans serovar Lai
str. 56601]
gi|45602723|gb|AAS72198.1| MotA/TolQ/ExbB proton channel family [Leptospira interrogans
serovar Copenhageni str. Fiocruz L1-130]
Length = 175
Score = 58.7 bits (141), Expect = 6e-07, Method: Composition-based stats.
Identities = 20/88 (22%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
+S++ +++ ++G+LG V+G+ F+ + S ++ + GI +L + + GLC
Sbjct: 77 ETMISWIRNLAGIATMLGLLGTVIGISVAFEEMKNAGSVSLEIFSEGIRLALNTTIQGLC 136
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFAN 215
VSIPS + + K ++++ +
Sbjct: 137 VSIPSILGFQYLKVILHKTEIELKSSVD 164
>gi|163751086|ref|ZP_02158316.1| TonB system transport protein ExbB2 [Shewanella benthica KT99]
gi|161329042|gb|EDQ00114.1| TonB system transport protein ExbB2 [Shewanella benthica KT99]
Length = 174
Score = 58.7 bits (141), Expect = 6e-07, Method: Composition-based stats.
Identities = 28/210 (13%), Positives = 71/210 (33%), Gaps = 45/210 (21%)
Query: 6 LAIMDI--SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLF 63
L +MDI S+ G + + +LF+ W +++++
Sbjct: 2 LFLMDIWDSVRGFMAAGGDVLWLVAAVLFVM----WVLMLERYWYLN------------- 44
Query: 64 WSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAR 123
W + E K R+ + I++
Sbjct: 45 WISPN-------------------------EHKAIITSWDAREDSTSWYAHRIREAWISQ 79
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISI 182
+ + ++ F+ ++ + ++G+LG V GM+ F +A + ++N + GI + +
Sbjct: 80 AKQNLNARMLFIKTLVAICPMIGLLGTVTGMISVFDVMAVHGTSNARMMAAGISMATMPT 139
Query: 183 LLGLCVSIPSSIAYNKFIEDSKKFAMQMEG 212
+ G+ ++ + K +++
Sbjct: 140 MAGMVAALSGVFFSTRLDAKMKISLEKLKD 169
>gi|254515773|ref|ZP_05127833.1| lipid A export ATP-binding/permease protein MsbA [gamma
proteobacterium NOR5-3]
gi|219675495|gb|EED31861.1| lipid A export ATP-binding/permease protein MsbA [gamma
proteobacterium NOR5-3]
Length = 172
Score = 58.7 bits (141), Expect = 7e-07, Method: Composition-based stats.
Identities = 33/202 (16%), Positives = 75/202 (37%), Gaps = 43/202 (21%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLET 71
+I A + G + I L+F+ W++I ++ F W + ET
Sbjct: 7 TILAFMDKGGNVLWLIAILVFVM----WTLIFERLWFFT-----------FVWRKEVFET 51
Query: 72 VCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEK 131
+ + W+ ++ + + I+ ++ ++ E+I
Sbjct: 52 I--------------------NAWEARPERKSWNAKQIRSQL-------LSISREDIQAN 84
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIE-SLISILLGLCVSI 190
L + ++ + L+G+LG V GM+ F +A + S+ G +E + I + G+ ++
Sbjct: 85 LPVITTLVALCPLLGLLGTVTGMIEVFNVMAVTGGGDAKSMAGGVERATIPTMAGMVAAL 144
Query: 191 PSSIAYNKFIEDSKKFAMQMEG 212
A + + +E
Sbjct: 145 SGLFANTYIQRVADREQELLED 166
>gi|330831692|ref|YP_004394644.1| TonB system biopolymer transport component [Aeromonas veronii B565]
gi|328806828|gb|AEB52027.1| TonB system biopolymer transport component [Aeromonas veronii B565]
Length = 176
Score = 58.7 bits (141), Expect = 7e-07, Method: Composition-based stats.
Identities = 30/192 (15%), Positives = 69/192 (35%), Gaps = 43/192 (22%)
Query: 19 QMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKN 78
+ G + I+ LL + W ++I++ +
Sbjct: 15 RGGPVLWVILALLVLM----WILMIERLLYL----------------------------- 41
Query: 79 HHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSM 138
N+G + + W+ ++ + I+ R + A + L F+ ++
Sbjct: 42 --NLGFGPLQQQLLGRWQARSERHSWHARAIR---SRWLAQAELE----LNRHLIFIRTL 92
Query: 139 SSAGLLVGILGAVLGMMGFFQSIAGYYS-NNVVSIPGIIESLISILLGLCVSIPSSIAYN 197
++G+LG V GM+G F ++A N GI + I + G+ V++ + +
Sbjct: 93 VVLCPMLGLLGTVTGMIGVFDALAAANRFNPESMAGGISRATIPTMAGMVVALSGVLLLS 152
Query: 198 KFIEDSKKFAMQ 209
+ +K+ +
Sbjct: 153 RLESQAKRALAK 164
>gi|91228113|ref|ZP_01262155.1| TonB system transport protein ExbB2 [Vibrio alginolyticus 12G01]
gi|91188231|gb|EAS74531.1| TonB system transport protein ExbB2 [Vibrio alginolyticus 12G01]
Length = 184
Score = 58.3 bits (140), Expect = 7e-07, Method: Composition-based stats.
Identities = 21/93 (22%), Positives = 47/93 (50%), Gaps = 1/93 (1%)
Query: 121 IARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-VVSIPGIIESL 179
IA+ E+ + LS + + + ++G+LG V GM+ F +A S+N + GI +
Sbjct: 86 IAKAQIELRQNLSTIKLLVAVCPMLGLLGTVTGMITVFDVMASQGSSNPKLMASGISLAT 145
Query: 180 ISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEG 212
+ + G+ ++ + + + ++ A+Q+E
Sbjct: 146 LPTMAGMVAALAGMFIHARLSKVCERKAIQLEQ 178
>gi|28868240|ref|NP_790859.1| MotA/TolQ/ExbB proton channel family protein [Pseudomonas syringae
pv. tomato str. DC3000]
gi|28851477|gb|AAO54554.1| MotA/TolQ/ExbB proton channel family protein [Pseudomonas syringae
pv. tomato str. DC3000]
gi|331019315|gb|EGH99371.1| MotA/TolQ/ExbB proton channel family protein [Pseudomonas syringae
pv. lachrymans str. M302278PT]
Length = 182
Score = 58.3 bits (140), Expect = 7e-07, Method: Composition-based stats.
Identities = 27/161 (16%), Positives = 69/161 (42%), Gaps = 12/161 (7%)
Query: 52 LRRQFREFEQLF-WSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQ 110
+RRQ R + S S + + ++L ++ L + + +
Sbjct: 1 MRRQSRALQTALSASVHSEKDLPETLTRRTSLPLEMVLPVLAQKNAHGSRRDLDD----- 55
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYY-SNNV 169
+++ ++ L + ++++A L+G+LG +LG++ F+++A S+
Sbjct: 56 -----VIETQYLSTRAPLSRSLWLIETITTAAPLLGLLGTILGIIDTFKALASAGVSDPG 110
Query: 170 VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQM 210
GI +L + LG+ +++ + +N F + ++ Q+
Sbjct: 111 QISAGIGTALFATGLGIAIALFCVVFHNYFQDSLERINDQL 151
>gi|67922254|ref|ZP_00515768.1| MotA/TolQ/ExbB proton channel [Crocosphaera watsonii WH 8501]
gi|67855957|gb|EAM51202.1| MotA/TolQ/ExbB proton channel [Crocosphaera watsonii WH 8501]
Length = 229
Score = 58.3 bits (140), Expect = 7e-07, Method: Composition-based stats.
Identities = 39/182 (21%), Positives = 72/182 (39%), Gaps = 22/182 (12%)
Query: 28 ITLLFIFSILSWSVIIQKSVN----FITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIG 83
+ L I S+L+ S II++SV + R+ ++ + + + K + ++
Sbjct: 14 MWPLLILSVLALSTIIERSVFWIQFLLKERKIVNRVLEM--AAHNWDAAPKVARENNKHP 71
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
+ + R + ++ + EL + L ++ +
Sbjct: 72 MGSFLY-----------GPLRLINPDPEVFHLALESSADDELALMKRGDKVLEAVIALSP 120
Query: 144 LVGILGAVLGMMGFFQSIA----GYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKF 199
L+G+LG VLG++ I G S V++ GI E+LIS GL V+I S Y F
Sbjct: 121 LLGLLGTVLGLITSLGDIQISDLGTSSTTGVTL-GIGEALISTATGLIVAIISLTFYRLF 179
Query: 200 IE 201
Sbjct: 180 QS 181
>gi|220906279|ref|YP_002481590.1| MotA/TolQ/ExbB proton channel [Cyanothece sp. PCC 7425]
gi|219862890|gb|ACL43229.1| MotA/TolQ/ExbB proton channel [Cyanothece sp. PCC 7425]
Length = 230
Score = 58.3 bits (140), Expect = 8e-07, Method: Composition-based stats.
Identities = 37/215 (17%), Positives = 78/215 (36%), Gaps = 28/215 (13%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFIT-LRRQFREFEQLFWSGQ-SL 69
++ +F + GLA + L + SIL+ S I ++ + + L+ + + EQ+ + +
Sbjct: 5 NVADIFNKGGLA----MWPLLVMSILAVSTIFERLWFWSSILKGENKTAEQILEAARRDW 60
Query: 70 ETVCKSLKNHHNIGLAAIFMS----AMSE---WKKSCDKGARSPIGIQDRIDRMMDVAIA 122
+ ++ + + A E ++ + + A + R +++++ IA
Sbjct: 61 DEATLLAHRANDQPIGRFLYTPLKLANKEPSIFRLALEASADEELNAMRRGEKILEATIA 120
Query: 123 RELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISI 182
S + + +G +G + GI E+LIS
Sbjct: 121 LAPLLGLLGTVLGLINSLSSIRLGDIGT---------------AATAGVTLGISEALIST 165
Query: 183 LLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEF 217
GL V+I + Y F + A NE
Sbjct: 166 ASGLIVAIIALAFYRLFQALLLQQARVFRRTGNEL 200
>gi|209964130|ref|YP_002297045.1| MotA [Rhodospirillum centenum SW]
gi|209957596|gb|ACI98232.1| MotA [Rhodospirillum centenum SW]
Length = 174
Score = 58.3 bits (140), Expect = 8e-07, Method: Composition-based stats.
Identities = 19/93 (20%), Positives = 41/93 (44%), Gaps = 1/93 (1%)
Query: 121 IARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESL 179
I++ +I +S + ++ + L+G+LG V GM+ F +A S N G+ ++
Sbjct: 77 ISQAKAKIEANVSMIKTLVAMAPLLGLLGTVTGMVEVFDVMAVLGSGNARAMASGVSKAT 136
Query: 180 ISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEG 212
I + G+ V+I + + ++
Sbjct: 137 IPTMSGMVVAISGLYFSFMLRRRADREVERLSD 169
>gi|27366803|ref|NP_762330.1| ferric siderophore transport system, biopolymer transport protein
ExbB [Vibrio vulnificus CMCP6]
gi|320158686|ref|YP_004191064.1| ferric siderophore transport system biopolymer transport protein
ExbB [Vibrio vulnificus MO6-24/O]
gi|27358370|gb|AAO07320.1| Ferric siderophore transport system, biopolymer transport protein
ExbB [Vibrio vulnificus CMCP6]
gi|319933998|gb|ADV88861.1| ferric siderophore transport system biopolymer transport protein
ExbB [Vibrio vulnificus MO6-24/O]
Length = 185
Score = 58.3 bits (140), Expect = 8e-07, Method: Composition-based stats.
Identities = 18/103 (17%), Positives = 48/103 (46%), Gaps = 2/103 (1%)
Query: 112 RIDRMMDVA-IARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-V 169
R A + +++ + L+F+ + + ++G+LG V GM+ F +A S+N
Sbjct: 77 WFARSQREAWLDDAHQQLFKHLAFIKVLVAICPMLGLLGTVTGMISVFDVMATQGSSNPK 136
Query: 170 VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEG 212
+ GI + + + G+ ++ + + ++ + +++E
Sbjct: 137 LMASGISLATLPTMAGMVAALVGMFVHARLVKLCQNREVKLEQ 179
>gi|89095499|ref|ZP_01168407.1| putative TonB system transport protein [Oceanospirillum sp. MED92]
gi|89080246|gb|EAR59510.1| putative TonB system transport protein [Oceanospirillum sp. MED92]
Length = 171
Score = 58.3 bits (140), Expect = 8e-07, Method: Composition-based stats.
Identities = 18/84 (21%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
+ + + ++ L+G+LG V GM+ F S+A Y + N + G+ + + G+
Sbjct: 79 LNGQFQMIKNLIMLCPLIGLLGTVTGMIQVFDSLALYGTGNPRMMAAGVASATFPTMTGM 138
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQM 210
V++ + YN+ S+ +
Sbjct: 139 AVAVAGLLFYNRLSRWSESERNNL 162
>gi|113970797|ref|YP_734590.1| MotA/TolQ/ExbB proton channel [Shewanella sp. MR-4]
gi|113885481|gb|ABI39533.1| MotA/TolQ/ExbB proton channel [Shewanella sp. MR-4]
Length = 175
Score = 58.3 bits (140), Expect = 8e-07, Method: Composition-based stats.
Identities = 23/208 (11%), Positives = 70/208 (33%), Gaps = 45/208 (21%)
Query: 8 IMDI--SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS 65
+MDI S+ G + + +LF+ W +++++ + + + W
Sbjct: 5 LMDIWDSVRGFMASGGDVLWLVAFVLFLM----WVLMLERYWYLNWISPKQHKAIIAAWD 60
Query: 66 GQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
+ R+ + +++
Sbjct: 61 ARE--------------------------------------ETTSWYAHRIREAWLSQAK 82
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILL 184
+++ ++ + ++ + ++G+LG V GM+ F +A ++N + GI + + +
Sbjct: 83 QDLNARMLVIKTLVAICPMIGLLGTVTGMISVFDVMAVQGTSNARLMAAGISMATMPTMA 142
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEG 212
G+ ++ + K +++
Sbjct: 143 GMVAALSGVFFSTRLDAKMKISLEKLKD 170
>gi|254227867|ref|ZP_04921297.1| Biopolymer transport proteins [Vibrio sp. Ex25]
gi|262396144|ref|YP_003287997.1| ferric siderophore transport system biopolymer transport protein
ExbB [Vibrio sp. Ex25]
gi|151939363|gb|EDN58191.1| Biopolymer transport proteins [Vibrio sp. Ex25]
gi|262339738|gb|ACY53532.1| ferric siderophore transport system biopolymer transport protein
ExbB [Vibrio sp. Ex25]
Length = 184
Score = 58.3 bits (140), Expect = 8e-07, Method: Composition-based stats.
Identities = 21/93 (22%), Positives = 47/93 (50%), Gaps = 1/93 (1%)
Query: 121 IARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-VVSIPGIIESL 179
IA+ E+ + LS + + + ++G+LG V GM+ F +A S+N + GI +
Sbjct: 86 IAKAQIELRQNLSTIKLLVAVCPMLGLLGTVTGMITVFDVMASQGSSNPKLMASGISLAT 145
Query: 180 ISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEG 212
+ + G+ ++ + + + ++ A+Q+E
Sbjct: 146 LPTMAGMVAALAGMFIHARLSKVCERKAIQLEQ 178
>gi|114048024|ref|YP_738574.1| MotA/TolQ/ExbB proton channel [Shewanella sp. MR-7]
gi|117921065|ref|YP_870257.1| MotA/TolQ/ExbB proton channel [Shewanella sp. ANA-3]
gi|113889466|gb|ABI43517.1| MotA/TolQ/ExbB proton channel [Shewanella sp. MR-7]
gi|117613397|gb|ABK48851.1| MotA/TolQ/ExbB proton channel [Shewanella sp. ANA-3]
Length = 175
Score = 58.3 bits (140), Expect = 9e-07, Method: Composition-based stats.
Identities = 23/208 (11%), Positives = 70/208 (33%), Gaps = 45/208 (21%)
Query: 8 IMDI--SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS 65
+MDI S+ G + + +LF+ W +++++ + + + W
Sbjct: 5 LMDIWDSVRGFMASGGDVLWLVAFVLFLM----WVLMLERYWYLNWISPKQHKAIIAAWD 60
Query: 66 GQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
+ R+ + +++
Sbjct: 61 ARE--------------------------------------ETTSWYAHRIREAWLSQAK 82
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILL 184
+++ ++ + ++ + ++G+LG V GM+ F +A ++N + GI + + +
Sbjct: 83 QDLNARMLVIKTLVAICPMIGLLGTVTGMISVFDVMAVQGTSNARLMAAGISMATMPTMA 142
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEG 212
G+ ++ + K +++
Sbjct: 143 GMVAALSGVFFSTRLDAKMKISLEKLKD 170
>gi|192361298|ref|YP_001980996.1| TonB system transport protein ExbB2 [Cellvibrio japonicus Ueda107]
gi|190687463|gb|ACE85141.1| TonB system transport protein ExbB2 [Cellvibrio japonicus Ueda107]
Length = 175
Score = 58.3 bits (140), Expect = 9e-07, Method: Composition-based stats.
Identities = 29/188 (15%), Positives = 65/188 (34%), Gaps = 43/188 (22%)
Query: 19 QMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKN 78
Q G + I L F+ W+++ ++ F
Sbjct: 17 QGGPVMYAIAALTFVM----WALVFERVWYFR---------------------------- 44
Query: 79 HHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSM 138
GL A+S W+K ++ + + I+ + M +I + + + ++
Sbjct: 45 ---GGLKGDVQQALSSWEKRPERKSWNAHQIRAAMVSRMSA-------KINQNMDMITTL 94
Query: 139 SSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYN 197
+ L+G+LG V GM+ F ++ + G+ + I + G+ +I A
Sbjct: 95 IALCPLMGLLGTVTGMIEVFSVLSLTGGGDAKQMAGGVSRATIPTMSGMVAAISGLFANT 154
Query: 198 KFIEDSKK 205
+++
Sbjct: 155 YLTRVAER 162
>gi|153838790|ref|ZP_01991457.1| TonB system transport protein ExbB2 [Vibrio parahaemolyticus
AQ3810]
gi|149747770|gb|EDM58664.1| TonB system transport protein ExbB2 [Vibrio parahaemolyticus
AQ3810]
Length = 184
Score = 57.9 bits (139), Expect = 9e-07, Method: Composition-based stats.
Identities = 20/93 (21%), Positives = 47/93 (50%), Gaps = 1/93 (1%)
Query: 121 IARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-VVSIPGIIESL 179
IA+ E+ + LS + + + ++G+LG V GM+ F +A S++ + GI +
Sbjct: 86 IAKAQIELRQNLSTIKLLVAICPMLGLLGTVTGMITVFDVMASQGSSDPKLMASGISLAT 145
Query: 180 ISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEG 212
+ + G+ ++ + + + ++ A+Q+E
Sbjct: 146 LPTMAGMVAALAGMFVHARLSKVCERKAIQLEQ 178
>gi|145301145|ref|YP_001143986.1| MotA/TolQ/ExbB proton channel [Aeromonas salmonicida subsp.
salmonicida A449]
gi|142853917|gb|ABO92238.1| MotA/TolQ/ExbB proton channel [Aeromonas salmonicida subsp.
salmonicida A449]
Length = 176
Score = 57.9 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/192 (15%), Positives = 69/192 (35%), Gaps = 43/192 (22%)
Query: 19 QMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKN 78
+ G + I+ LL + W ++I++ +
Sbjct: 15 RGGPVLWVILALLVLM----WILMIERLLYL----------------------------- 41
Query: 79 HHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSM 138
N+G + + W+ ++ + I+ R + A + L F+ ++
Sbjct: 42 --NLGFGPLQQQLLGRWQARSERHSWHARAIR---GRWLAQAELE----LNRHLIFIRTL 92
Query: 139 SSAGLLVGILGAVLGMMGFFQSIAGYYS-NNVVSIPGIIESLISILLGLCVSIPSSIAYN 197
++G+LG V GM+G F ++A N GI + I + G+ V++ + +
Sbjct: 93 VVLCPMLGLLGTVTGMIGVFDALAAANRFNPESMAGGISRATIPTMAGMVVALSGVLLLS 152
Query: 198 KFIEDSKKFAMQ 209
+ +K+ +
Sbjct: 153 RLESQAKRALAK 164
>gi|261211671|ref|ZP_05925958.1| ferric siderophore transport system biopolymer transport protein
ExbB [Vibrio sp. RC341]
gi|262402225|ref|ZP_06078786.1| ferric siderophore transport system biopolymer transport protein
ExbB [Vibrio sp. RC586]
gi|260839021|gb|EEX65653.1| ferric siderophore transport system biopolymer transport protein
ExbB [Vibrio sp. RC341]
gi|262351007|gb|EEZ00140.1| ferric siderophore transport system biopolymer transport protein
ExbB [Vibrio sp. RC586]
Length = 179
Score = 57.9 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 18/105 (17%), Positives = 45/105 (42%), Gaps = 2/105 (1%)
Query: 110 QDRIDRMMDVAIARELE-EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN 168
Q R + E + + L+ + + + ++G+LG V GM+ F +A S++
Sbjct: 69 QSWFARSIREQWLGEAHIALNQNLNLIKVLVAICPMLGLLGTVTGMISVFDVMATQGSSD 128
Query: 169 -VVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEG 212
+ GI + + + G+ ++ + + + + M++E
Sbjct: 129 PKLMASGISLATLPTMAGMVAALAGLFVHARLSKTCRGLEMKLEQ 173
>gi|153834907|ref|ZP_01987574.1| TonB system transport protein ExbB2 [Vibrio harveyi HY01]
gi|148868678|gb|EDL67760.1| TonB system transport protein ExbB2 [Vibrio harveyi HY01]
Length = 184
Score = 57.9 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 21/93 (22%), Positives = 47/93 (50%), Gaps = 1/93 (1%)
Query: 121 IARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-VVSIPGIIESL 179
IA+ E+ + LS + + + ++G+LG V GM+ F +A S+N + GI +
Sbjct: 86 IAKAHIELRQNLSTIKVLVAICPMLGLLGTVTGMITVFDVMATQGSSNPKLMASGISLAT 145
Query: 180 ISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEG 212
+ + G+ ++ + + + ++ A+Q+E
Sbjct: 146 LPTMAGMVAALAGMFVHARLSKVCERKALQLEQ 178
>gi|262171436|ref|ZP_06039114.1| ferric siderophore transport system biopolymer transport protein
ExbB [Vibrio mimicus MB-451]
gi|261892512|gb|EEY38498.1| ferric siderophore transport system biopolymer transport protein
ExbB [Vibrio mimicus MB-451]
Length = 179
Score = 57.9 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 18/105 (17%), Positives = 45/105 (42%), Gaps = 2/105 (1%)
Query: 110 QDRIDRMMDVAIARELE-EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN 168
Q R + E + + L+ + + + ++G+LG V GM+ F +A S++
Sbjct: 69 QSWFARSIREQWLGEAHIALNQNLNLIKVLVAICPMLGLLGTVTGMISVFDVMATQGSSD 128
Query: 169 -VVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEG 212
+ GI + + + G+ ++ + + + + M++E
Sbjct: 129 PKLMASGISLATLPTMAGMVAALAGLFVHARLSKTCRGLEMKLEQ 173
>gi|28900008|ref|NP_799663.1| TonB system transport protein ExbB2 [Vibrio parahaemolyticus RIMD
2210633]
gi|260362143|ref|ZP_05775138.1| TonB system transport protein ExbB2 [Vibrio parahaemolyticus K5030]
gi|260880587|ref|ZP_05892942.1| TonB system transport protein ExbB2 [Vibrio parahaemolyticus
AN-5034]
gi|260896328|ref|ZP_05904824.1| TonB system transport protein ExbB2 [Vibrio parahaemolyticus
Peru-466]
gi|260899743|ref|ZP_05908138.1| TonB system transport protein ExbB2 [Vibrio parahaemolyticus
AQ4037]
gi|27597190|dbj|BAC55124.1| probable ExbB2 protein [Vibrio parahaemolyticus]
gi|28808291|dbj|BAC61496.1| TonB system transport protein ExbB2 [Vibrio parahaemolyticus RIMD
2210633]
gi|308085154|gb|EFO34849.1| TonB system transport protein ExbB2 [Vibrio parahaemolyticus
Peru-466]
gi|308091693|gb|EFO41388.1| TonB system transport protein ExbB2 [Vibrio parahaemolyticus
AN-5034]
gi|308110398|gb|EFO47938.1| TonB system transport protein ExbB2 [Vibrio parahaemolyticus
AQ4037]
gi|308114650|gb|EFO52190.1| TonB system transport protein ExbB2 [Vibrio parahaemolyticus K5030]
Length = 184
Score = 57.9 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 20/93 (21%), Positives = 47/93 (50%), Gaps = 1/93 (1%)
Query: 121 IARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-VVSIPGIIESL 179
IA+ E+ + LS + + + ++G+LG V GM+ F +A S++ + GI +
Sbjct: 86 IAKAQIELRQNLSTIKLLVAICPMLGLLGTVTGMITVFDVMASQGSSDPKLMASGISLAT 145
Query: 180 ISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEG 212
+ + G+ ++ + + + ++ A+Q+E
Sbjct: 146 LPTMAGMVAALAGMFVHARLSKVCERKAIQLEQ 178
>gi|328469993|gb|EGF40904.1| TonB system transport protein ExbB2 [Vibrio parahaemolyticus 10329]
Length = 184
Score = 57.9 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 20/93 (21%), Positives = 47/93 (50%), Gaps = 1/93 (1%)
Query: 121 IARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-VVSIPGIIESL 179
IA+ E+ + LS + + + ++G+LG V GM+ F +A S++ + GI +
Sbjct: 86 IAKAQIELRQNLSTIKLLVAICPMLGLLGTVTGMITVFDVMASQGSSDPKLMASGISLAT 145
Query: 180 ISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEG 212
+ + G+ ++ + + + ++ A+Q+E
Sbjct: 146 LPTMAGMVAALAGMFVHARLSKVCERKAIQLEQ 178
>gi|258624584|ref|ZP_05719522.1| TonB system transport protein ExbB2 [Vibrio mimicus VM603]
gi|258583131|gb|EEW07942.1| TonB system transport protein ExbB2 [Vibrio mimicus VM603]
Length = 180
Score = 57.9 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 18/105 (17%), Positives = 45/105 (42%), Gaps = 2/105 (1%)
Query: 110 QDRIDRMMDVAIARELE-EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN 168
Q R + E + + L+ + + + ++G+LG V GM+ F +A S++
Sbjct: 70 QSWFARSIREQWLGEAHIALNQNLNLIKVLVAICPMLGLLGTVTGMISVFDVMATQGSSD 129
Query: 169 -VVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEG 212
+ GI + + + G+ ++ + + + + M++E
Sbjct: 130 PKLMASGISLATLPTMAGMVAALAGLFVHARLSKTCRGLEMKLEQ 174
>gi|156977962|ref|YP_001448868.1| hypothetical protein VIBHAR_06758 [Vibrio harveyi ATCC BAA-1116]
gi|156529556|gb|ABU74641.1| hypothetical protein VIBHAR_06758 [Vibrio harveyi ATCC BAA-1116]
Length = 184
Score = 57.9 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 19/87 (21%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-VVSIPGIIESLISILLG 185
E+ + LS + + + ++G+LG V GM+ F +A S+N + GI + + + G
Sbjct: 92 ELRQNLSTIKVLVAICPMLGLLGTVTGMITVFDVMATQGSSNPKLMASGISLATLPTMAG 151
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEG 212
+ ++ + + + ++ A+Q+E
Sbjct: 152 MVAALAGMFVHARLSKVCERKALQLEQ 178
>gi|37676578|ref|NP_936974.1| biopolymer transport protein ExbB2 [Vibrio vulnificus YJ016]
gi|37201121|dbj|BAC96944.1| biopolymer transport protein ExbB2 [Vibrio vulnificus YJ016]
Length = 188
Score = 57.9 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 18/103 (17%), Positives = 48/103 (46%), Gaps = 2/103 (1%)
Query: 112 RIDRMMDVA-IARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-V 169
R A + +++ + L+F+ + + ++G+LG V GM+ F +A S+N
Sbjct: 80 WFARSQREAWLDDAHQQLFKHLAFIKVLVAICPMLGLLGTVTGMISVFDVMATQGSSNPK 139
Query: 170 VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEG 212
+ GI + + + G+ ++ + + ++ + +++E
Sbjct: 140 LMASGISLATLPTMAGMVAALVGMFVHARLVKLCQNREVKLEQ 182
>gi|330720939|gb|EGG99113.1| Ferric siderophore transport system2C biopolymer transport protein
ExbB [gamma proteobacterium IMCC2047]
Length = 189
Score = 57.5 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 38/203 (18%), Positives = 76/203 (37%), Gaps = 45/203 (22%)
Query: 6 LAIMDI--SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLF 63
LA+MD +I + G + I L+F+ W++I+++S+ F R R
Sbjct: 5 LAMMDQWQAISDFMTRGGTVLWLIALLVFVM----WTLILERSLFFCLKARAMRHQMVAD 60
Query: 64 WSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAR 123
W + DK + I+ + ++R
Sbjct: 61 WQARD-------------------------------DKSSWHAHKIRQAL-------LSR 82
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV-SIPGIIESLISI 182
+ + + LS + ++ L G+LG V GM+ F ++ S +V GI ++ I
Sbjct: 83 ANQSVDQNLSLIKTLILLCPLFGLLGTVTGMIEVFTVLSVVGSGDVKPIASGISKATIPT 142
Query: 183 LLGLCVSIPSSIAYNKFIEDSKK 205
+ G+ ++ A + S++
Sbjct: 143 MAGMVAALSGVFAMSWLSRQSQQ 165
>gi|157374712|ref|YP_001473312.1| MotA/TolQ/ExbB proton channel [Shewanella sediminis HAW-EB3]
gi|157317086|gb|ABV36184.1| MotA/TolQ/ExbB proton channel [Shewanella sediminis HAW-EB3]
Length = 174
Score = 57.5 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/210 (12%), Positives = 71/210 (33%), Gaps = 45/210 (21%)
Query: 6 LAIMDI--SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLF 63
L +MDI S+ G + + +LF+ W +++++
Sbjct: 2 LFLMDIWDSVRGFMAAGGDVLWLVAGVLFVM----WVLMLERYWYLN------------- 44
Query: 64 WSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAR 123
W E K R+ + +++
Sbjct: 45 WVSP-------------------------KEHKAIISAWEAREDSTSWYAHRIREAWVSQ 79
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISI 182
+++T ++ + ++ + ++G+LG V GM+ F +A + ++N + GI + +
Sbjct: 80 AKQDLTARMLLIKTLVAICPMIGLLGTVTGMISVFDVMAVHGTSNARMMAAGISMATMPT 139
Query: 183 LLGLCVSIPSSIAYNKFIEDSKKFAMQMEG 212
+ G+ ++ + K +++
Sbjct: 140 MAGMVAALSGVFFSTRLDAKMKISLAKLKD 169
>gi|148977292|ref|ZP_01813906.1| TolQ protein [Vibrionales bacterium SWAT-3]
gi|145963405|gb|EDK28669.1| TolQ protein [Vibrionales bacterium SWAT-3]
Length = 186
Score = 57.5 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 15/85 (17%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSN-NVVSIPGIIESLISILLGL 186
+ + L+F+ + + ++G+LG V GM+ F +A S+ + GI + + + G+
Sbjct: 95 LNQNLNFIKLLVAICPMLGLLGTVTGMISVFDVMATQGSSEPKLMASGISLATLPTMAGM 154
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQME 211
++ + + + + +++E
Sbjct: 155 VAALAGMFVHARLAKVCNRLELKLE 179
>gi|260768383|ref|ZP_05877317.1| ferric siderophore transport system biopolymer transport protein
ExbB [Vibrio furnissii CIP 102972]
gi|260616413|gb|EEX41598.1| ferric siderophore transport system biopolymer transport protein
ExbB [Vibrio furnissii CIP 102972]
gi|315180094|gb|ADT87008.1| hypothetical TonB system transport protein ExbB2 [Vibrio furnissii
NCTC 11218]
Length = 181
Score = 57.5 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 21/121 (17%), Positives = 53/121 (43%), Gaps = 8/121 (6%)
Query: 92 MSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAV 151
+ +W D + I++ I + +T+ L+ + + + ++G+LG V
Sbjct: 61 VEQWHARRDHQSWHAHAIREG-------WIGQAHIALTQNLNVIKVLVAICPMLGLLGTV 113
Query: 152 LGMMGFFQSIAGYYSNN-VVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQM 210
GM+ F +A S+N + GI + + + G+ ++ + + + + F +++
Sbjct: 114 TGMISVFDVMATQGSSNPKLMASGISLATLPTMAGMVAALAGMFVHARLAKTCRLFELKL 173
Query: 211 E 211
E
Sbjct: 174 E 174
>gi|312881677|ref|ZP_07741455.1| TolQ protein [Vibrio caribbenthicus ATCC BAA-2122]
gi|309370740|gb|EFP98214.1| TolQ protein [Vibrio caribbenthicus ATCC BAA-2122]
Length = 185
Score = 57.5 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 16/86 (18%), Positives = 41/86 (47%), Gaps = 1/86 (1%)
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLG 185
+ + L F+ + + ++G+LG V GM+ F +A S++ + GI + I + G
Sbjct: 93 SLNKNLRFIKVLVAICPMLGLLGTVTGMISVFDVMANQGSSSPELMASGISLATIPTMAG 152
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQME 211
+ ++ +++ + +++E
Sbjct: 153 MVAALTGMFCHSRLSKICMTKQIKLE 178
>gi|94499686|ref|ZP_01306223.1| TonB system transport protein ExbB2 [Oceanobacter sp. RED65]
gi|94428440|gb|EAT13413.1| TonB system transport protein ExbB2 [Oceanobacter sp. RED65]
Length = 167
Score = 57.5 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 21/106 (19%), Positives = 48/106 (45%), Gaps = 4/106 (3%)
Query: 114 DRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSI 172
+++ + I++ + + + + L+G+LG V GM+ F ++A + N
Sbjct: 64 EKVRRLYISQVKQAFNKHFGLIQLLVVICPLMGLLGTVTGMINVFDTMAVTGTGNARAMA 123
Query: 173 PGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFS 218
GI + + + G+ +S+ +F +KK Q+E F ++
Sbjct: 124 SGISMATVPTMAGMVISLIGLYFKTRFSSMAKK---QLEIFQDKLL 166
>gi|83945425|ref|ZP_00957773.1| TonB system transport protein [Oceanicaulis alexandrii HTCC2633]
gi|83851259|gb|EAP89116.1| TonB system transport protein [Oceanicaulis alexandrii HTCC2633]
Length = 173
Score = 57.5 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/195 (14%), Positives = 71/195 (36%), Gaps = 43/195 (22%)
Query: 19 QMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKN 78
+ G + I+ L F+ W+ I+++ F + + + W +S
Sbjct: 16 RGGPILTWIMALTFVM----WAFILERLAYFGFAHKGAADRARQEWGARS---------- 61
Query: 79 HHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSM 138
D + I+D++ I+ + + + + ++
Sbjct: 62 ---------------------DHHSWHAHAIRDQL-------ISEVKAKADQNVELIKTL 93
Query: 139 SSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCVSIPSSIAYN 197
+ L G+LG V GM+ F ++ S++ ++ G+ + I + G+ S+ + N
Sbjct: 94 VAVAPLFGLLGTVTGMVSVFDVMSISGSSDARAMSAGVARATIPTMAGMVASLSGLLFSN 153
Query: 198 KFIEDSKKFAMQMEG 212
+ +K+ ++
Sbjct: 154 QIERMAKQKVHELAD 168
>gi|114569421|ref|YP_756101.1| MotA/TolQ/ExbB proton channel [Maricaulis maris MCS10]
gi|114339883|gb|ABI65163.1| outer membrane transport energization protein ExbB [Maricaulis
maris MCS10]
Length = 178
Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/127 (20%), Positives = 54/127 (42%), Gaps = 12/127 (9%)
Query: 90 SAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILG 149
SA EW D+ + I+D++ I+ + + + ++ + L G+LG
Sbjct: 52 SAKREWNARADRNSWYAHAIRDQL-------ISEVKSRCDQNVELVKTLVAVAPLFGLLG 104
Query: 150 AVLGMMGFFQSIAGYYSNNVVSI-PGIIESLISILLGLCVSIPSSIAYNKF----IEDSK 204
V GM+ F ++ S++ ++ G+ + I + G+ S+ I N+
Sbjct: 105 TVTGMVSVFDVMSISGSSDAQAMSAGVSRATIPTMAGMVASLSGLIFANQIELLAKRRVS 164
Query: 205 KFAMQME 211
K A ++E
Sbjct: 165 KLADELE 171
>gi|254444740|ref|ZP_05058216.1| transporter, MotA/TolQ/ExbB proton channel family, putative
[Verrucomicrobiae bacterium DG1235]
gi|198259048|gb|EDY83356.1| transporter, MotA/TolQ/ExbB proton channel family, putative
[Verrucomicrobiae bacterium DG1235]
Length = 171
Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/102 (20%), Positives = 41/102 (40%), Gaps = 2/102 (1%)
Query: 95 WKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGM 154
+ D A Q+R + + + +L + + +A L+G+LG V+GM
Sbjct: 40 FTSRLDAHASFFSHTQERTRNAVQDFRDNLSQLVRTQLKYANVLIAAAPLLGLLGTVIGM 99
Query: 155 MGFFQSIA--GYYSNNVVSIPGIIESLISILLGLCVSIPSSI 194
+ F+ I G+ +LI+ GL ++I +
Sbjct: 100 LDTFKGIGAEAGQDTTKAVADGVKVALITTQTGLMIAIFGLL 141
>gi|163802270|ref|ZP_02196165.1| TonB system transport protein ExbB2 [Vibrio sp. AND4]
gi|159174075|gb|EDP58885.1| TonB system transport protein ExbB2 [Vibrio sp. AND4]
Length = 175
Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 33/187 (17%), Positives = 67/187 (35%), Gaps = 39/187 (20%)
Query: 27 IITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAA 86
++ +FI S + W+V++++ F + + + FW +S
Sbjct: 21 VLVAIFILSFMLWAVLLERWFYFAAVAPKAMKQAVSFWQERS------------------ 62
Query: 87 IFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVG 146
E K K R I + I+ + L + + + L+G
Sbjct: 63 -------EHKSWNAKMIRQEIVSRQDIEN-------------KKGLPIVKVLIALCPLLG 102
Query: 147 ILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKK 205
+LG V+GM+ F +A + + GI ++ I L G+ S+ + +K
Sbjct: 103 LLGTVVGMIQVFDILAVTGTGSPRAMASGISKATIPTLAGMVASLSGLFFSTRLDHLAKV 162
Query: 206 FAMQMEG 212
++E
Sbjct: 163 TTQKLED 169
>gi|114563790|ref|YP_751303.1| MotA/TolQ/ExbB proton channel [Shewanella frigidimarina NCIMB 400]
gi|114335083|gb|ABI72465.1| MotA/TolQ/ExbB proton channel [Shewanella frigidimarina NCIMB 400]
Length = 175
Score = 57.1 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 19/202 (9%), Positives = 66/202 (32%), Gaps = 43/202 (21%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLET 71
S+ G + + +LF+ W +++++ + + + W +
Sbjct: 11 SVRGFMASGGDVLWLVAAVLFLM----WVLMLERYWYLNWISPKQHQAVIASWEARE--- 63
Query: 72 VCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEK 131
R+ + +++ +++ +
Sbjct: 64 -----------------------------------ETTSWHAHRIREAWVSQAKQDLNAR 88
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSI 190
+ + ++ + ++G+LG V GM+ F +A ++N + GI + + + G+ ++
Sbjct: 89 MLLIKTLVAICPMIGLLGTVTGMISVFDVMAVQGTSNARLMAAGISMATMPTMAGMVAAL 148
Query: 191 PSSIAYNKFIEDSKKFAMQMEG 212
+ + +++
Sbjct: 149 SGVFFSTRLDSKMRISLEKLKD 170
>gi|149908163|ref|ZP_01896827.1| putative TonB system transport protein [Moritella sp. PE36]
gi|149808705|gb|EDM68638.1| putative TonB system transport protein [Moritella sp. PE36]
Length = 180
Score = 57.1 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 18/82 (21%), Positives = 38/82 (46%), Gaps = 1/82 (1%)
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSN-NVVSIPGIIESLISILLGLCVS 189
LSFL + + ++G+LG V GM+ F +A S+ + GI + + + G+ +
Sbjct: 90 NLSFLKVLVAICPMLGLLGTVTGMISVFDVMATLGSSEPKLMAAGISLATLPTMAGMVAA 149
Query: 190 IPSSIAYNKFIEDSKKFAMQME 211
+ A+ + + ++E
Sbjct: 150 LAGMFAHARLTKACDTRYSRLE 171
>gi|170727417|ref|YP_001761443.1| MotA/TolQ/ExbB proton channel [Shewanella woodyi ATCC 51908]
gi|169812764|gb|ACA87348.1| MotA/TolQ/ExbB proton channel [Shewanella woodyi ATCC 51908]
Length = 175
Score = 57.1 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/210 (12%), Positives = 71/210 (33%), Gaps = 45/210 (21%)
Query: 6 LAIMDI--SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLF 63
L +MDI S+ G + + +LF+ W +++++
Sbjct: 3 LYLMDIWDSVRGFMATGGDVLWLVAAVLFLM----WVLMLERFWYLN------------- 45
Query: 64 WSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAR 123
+ A K R+ + +++
Sbjct: 46 -------------------------LIAPKAHKSIITAWNDREDSTSWYAHRIREAWVSQ 80
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISI 182
+++ ++ + ++ +A ++G+LG V GM+ F +A + ++N + GI + +
Sbjct: 81 AKQDMNARMLIIKTLVAACPMIGLLGTVTGMIQVFDVMAVHGTSNARMMAAGISMATMPT 140
Query: 183 LLGLCVSIPSSIAYNKFIEDSKKFAMQMEG 212
+ G+ ++ + K +++
Sbjct: 141 MAGMVAALSGVFFSTRLDAKMKISLEKLKD 170
>gi|28896939|ref|NP_796544.1| TonB system transport protein ExbB2 [Vibrio parahaemolyticus RIMD
2210633]
gi|153837862|ref|ZP_01990529.1| TonB system transport protein ExbB2 [Vibrio parahaemolyticus
AQ3810]
gi|260365872|ref|ZP_05778366.1| TonB system transport protein ExbB2 [Vibrio parahaemolyticus K5030]
gi|260877841|ref|ZP_05890196.1| TonB system transport protein ExbB2 [Vibrio parahaemolyticus
AN-5034]
gi|260895510|ref|ZP_05904006.1| TonB system transport protein ExbB2 [Vibrio parahaemolyticus
Peru-466]
gi|260902534|ref|ZP_05910929.1| TonB system transport protein ExbB2 [Vibrio parahaemolyticus
AQ4037]
gi|28805147|dbj|BAC58428.1| TonB system transport protein ExbB2 [Vibrio parahaemolyticus RIMD
2210633]
gi|149748725|gb|EDM59570.1| TonB system transport protein ExbB2 [Vibrio parahaemolyticus
AQ3810]
gi|308088480|gb|EFO38175.1| TonB system transport protein ExbB2 [Vibrio parahaemolyticus
Peru-466]
gi|308089958|gb|EFO39653.1| TonB system transport protein ExbB2 [Vibrio parahaemolyticus
AN-5034]
gi|308109660|gb|EFO47200.1| TonB system transport protein ExbB2 [Vibrio parahaemolyticus
AQ4037]
gi|308113434|gb|EFO50974.1| TonB system transport protein ExbB2 [Vibrio parahaemolyticus K5030]
gi|328471716|gb|EGF42593.1| TonB system transport protein ExbB2 [Vibrio parahaemolyticus 10329]
Length = 175
Score = 57.1 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 32/187 (17%), Positives = 68/187 (36%), Gaps = 39/187 (20%)
Query: 27 IITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAA 86
++ +FI S + W+V++++ F + + + WS +S
Sbjct: 21 VLVAIFILSFMLWAVLLERWFYFAAVAPRAAKKAVTLWSERS------------------ 62
Query: 87 IFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVG 146
E + K R I + I+ + L + + + L+G
Sbjct: 63 -------EHQSWNAKMIRQEIVSRQDIEN-------------KKGLPIVKVLIALCPLLG 102
Query: 147 ILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKK 205
+LG V+GM+ F +A + + GI ++ I L G+ S+ ++ +K
Sbjct: 103 LLGTVVGMIQVFDILAVTGTGSPRAMASGISKATIPTLAGMVASLSGLFFSSRLDHLAKV 162
Query: 206 FAMQMEG 212
++E
Sbjct: 163 TTQKLED 169
>gi|258622910|ref|ZP_05717926.1| TonB system transport protein ExbB2 [Vibrio mimicus VM573]
gi|258584849|gb|EEW09582.1| TonB system transport protein ExbB2 [Vibrio mimicus VM573]
Length = 180
Score = 57.1 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 18/105 (17%), Positives = 45/105 (42%), Gaps = 2/105 (1%)
Query: 110 QDRIDRMMDVAIARELE-EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN 168
Q R + E + + L+ + + + ++G+LG V GM+ F +A S++
Sbjct: 70 QSWFARSIREQWLGEAHIALHQNLNLIKVLVAICPMLGLLGTVTGMISVFDVMATQGSSD 129
Query: 169 -VVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEG 212
+ GI + + + G+ ++ + + + + M++E
Sbjct: 130 PKLMASGISLATLPTMAGMVAALAGLFVHARLSKTCRGLEMKLEQ 174
>gi|90581003|ref|ZP_01236804.1| tonB system transport protein ExbB2 [Vibrio angustum S14]
gi|90437881|gb|EAS63071.1| tonB system transport protein ExbB2 [Vibrio angustum S14]
Length = 175
Score = 57.1 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 32/187 (17%), Positives = 68/187 (36%), Gaps = 39/187 (20%)
Query: 27 IITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAA 86
++ +FI S + W V++++ F+ +
Sbjct: 21 VLIAIFILSFMLWVVLLERWFYFVAV-------------------------------APK 49
Query: 87 IFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVG 146
SA++ W D + + I+ I I+++ E L + + + L+G
Sbjct: 50 AAKSALNNWMIRKDHNSWNAKAIRQEI-------ISKQDIENKRGLPVIKVLIALCPLLG 102
Query: 147 ILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKK 205
+LG V+GM+ F +A + + GI ++ I L G+ S+ + +K
Sbjct: 103 LLGTVVGMIQVFDILAVVGTGSPRAMASGISKATIPTLAGMVASLSGLFFSTRLDHQAKM 162
Query: 206 FAMQMEG 212
++E
Sbjct: 163 TTQKLED 169
>gi|237800332|ref|ZP_04588793.1| MotA/TolQ/ExbB proton channel family protein [Pseudomonas syringae
pv. oryzae str. 1_6]
gi|331023189|gb|EGI03246.1| MotA/TolQ/ExbB proton channel family protein [Pseudomonas syringae
pv. oryzae str. 1_6]
Length = 84
Score = 57.1 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 14/61 (22%), Positives = 25/61 (40%)
Query: 166 SNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+N V GI ++LI GL V+IP+ + + + ME A ++
Sbjct: 2 ANAGVLASGISKALICTASGLIVAIPAIFFHRFLQSRVDELVVGMEQQAIRLVEVVQGDR 61
Query: 226 E 226
+
Sbjct: 62 D 62
>gi|59713961|ref|YP_206736.1| TolQ protein [Vibrio fischeri ES114]
gi|59482209|gb|AAW87848.1| TolQ protein [Vibrio fischeri ES114]
Length = 177
Score = 57.1 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/121 (17%), Positives = 54/121 (44%), Gaps = 8/121 (6%)
Query: 92 MSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAV 151
+S+W + + + I+D ++ A + + L+F+ + S ++G+LG V
Sbjct: 57 ISQWHQREEHDSWHAHAIRD---SWLNQAHIE----LNQHLNFIKWLVSICPMLGLLGTV 109
Query: 152 LGMMGFFQSIAGYYSN-NVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQM 210
GM+ F +A S+ + GI + + + G+ ++ + + + + +++
Sbjct: 110 TGMISVFDVMATLGSSQPKLMASGISLATLPTMAGMVAALAGLFVHARLSKTCRLRELKL 169
Query: 211 E 211
E
Sbjct: 170 E 170
>gi|24373391|ref|NP_717434.1| TonB system transport protein ExbB2 [Shewanella oneidensis MR-1]
gi|24347660|gb|AAN54878.1|AE015626_7 TonB system transport protein ExbB2 [Shewanella oneidensis MR-1]
Length = 160
Score = 57.1 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/196 (10%), Positives = 66/196 (33%), Gaps = 43/196 (21%)
Query: 18 MQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLK 77
G + + +LF+ W+++I++ + + W +
Sbjct: 2 AAGGNVLWLVAFVLFVM----WALMIERYWYLKWISPKKHRAIIAAWDARE--------- 48
Query: 78 NHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGS 137
R+ + +++ +E+ +++ + +
Sbjct: 49 -----------------------------ETTSWYAHRIREAWVSQASQELNDRMLMIKT 79
Query: 138 MSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAY 196
+ + ++G+LG V GM+ F +A ++N + GI + + + G+ ++
Sbjct: 80 LVAICPMIGLLGTVTGMISVFDVMAVQGTSNARLMAAGISMATMPTMAGMVAALSGVFVS 139
Query: 197 NKFIEDSKKFAMQMEG 212
+ + K +++
Sbjct: 140 TRLDQQMKIRLEKLKD 155
>gi|317052095|ref|YP_004113211.1| MotA/TolQ/ExbB proton channel [Desulfurispirillum indicum S5]
gi|316947179|gb|ADU66655.1| MotA/TolQ/ExbB proton channel [Desulfurispirillum indicum S5]
Length = 208
Score = 57.1 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/180 (14%), Positives = 62/180 (34%), Gaps = 42/180 (23%)
Query: 17 FMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSL 76
F G + + +L + I W++II++ +
Sbjct: 11 FFHAG--GQVLWAILIVA-IAMWALIIERYWYHWRVF----------------------- 44
Query: 77 KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLG 136
E+ + P+ ++ + I+R +++ L +
Sbjct: 45 ---------------PREFATLLQRWEHPPVSDLWLARKLQQMEISRLRQQLGASLFLIR 89
Query: 137 SMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISILLGLCVSIPSSIA 195
+ + L+G+LG V+GM+ F+ + + N +I G+ + + + GL V++
Sbjct: 90 TFIAMCPLLGLLGTVVGMIQVFEVLEYSGTGNPRAIATGVSMATLPTMSGLVVALSGLFF 149
>gi|149908299|ref|ZP_01896963.1| TonB system transport protein [Moritella sp. PE36]
gi|149808841|gb|EDM68774.1| TonB system transport protein [Moritella sp. PE36]
Length = 175
Score = 57.1 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/86 (25%), Positives = 41/86 (47%), Gaps = 1/86 (1%)
Query: 121 IARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESL 179
IA+ ++ + +SFL + L+G+LG V GM+ F +A + + N + GI +
Sbjct: 77 IAQAELKLQQHMSFLNVLIKIFPLLGLLGTVSGMIQVFDVVAVHGTGNPRLLASGISMAT 136
Query: 180 ISILLGLCVSIPSSIAYNKFIEDSKK 205
I + GL ++ Y++ K
Sbjct: 137 IPTMAGLVCALSGLFFYSRLQSQRKN 162
>gi|332994433|gb|AEF04488.1| MotA/TolQ/ExbB proton channel [Alteromonas sp. SN2]
Length = 172
Score = 57.1 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/197 (15%), Positives = 66/197 (33%), Gaps = 42/197 (21%)
Query: 17 FMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSL 76
F + G V +I LL + W +I+++++ + +Q ++ W+ +
Sbjct: 11 FTETGGQVLLVIGLLIF---VMWLLILERAMYLMIWHKQAKKEAVSMWTAR--------- 58
Query: 77 KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLG 136
N +A I++ + + +
Sbjct: 59 -NDRASWIAQQVR----------------------------QKTISQLTMRLNGSIPIIQ 89
Query: 137 SMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIA 195
S+ + L+G++G V GM+ F +A S N G+ ++ I + G+ ++ A
Sbjct: 90 SLVALCPLLGLMGTVTGMIEVFDVMAIAGSGNARSMASGVSKATIPTMAGMVGALSGVFA 149
Query: 196 YNKFIEDSKKFAMQMEG 212
K +E
Sbjct: 150 STWLNRMVKSERTHLED 166
>gi|167948212|ref|ZP_02535286.1| hypothetical protein Epers_17364 [Endoriftia persephone
'Hot96_1+Hot96_2']
Length = 64
Score = 56.7 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 29/57 (50%)
Query: 9 MDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS 65
D+S L + V+ +I LL + S+ SW++I + RR EFE+ FWS
Sbjct: 3 TDLSFAQLILNASPVVQFVIGLLVLTSLGSWTMIFDRMRVLRRARRAADEFEKRFWS 59
>gi|88706387|ref|ZP_01104092.1| TonB system transport protein ExbB2 [Congregibacter litoralis KT71]
gi|88699323|gb|EAQ96437.1| TonB system transport protein ExbB2 [Congregibacter litoralis KT71]
Length = 172
Score = 56.7 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 33/202 (16%), Positives = 76/202 (37%), Gaps = 43/202 (21%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLET 71
+I A + G + I L+F+ W++I ++ F W + ET
Sbjct: 7 TILAFMDKGGNVLWLIAILVFVM----WTLIFERLWFFT-----------FVWRKEVFET 51
Query: 72 VCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEK 131
+ + W+ ++ + + I+ ++ ++ E+I
Sbjct: 52 I--------------------NAWESRSERKSWNAKQIRSQL-------LSVSREDIHAN 84
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIE-SLISILLGLCVSI 190
L+ + ++ + L+G+LG V GM+ F +A + S+ G +E + I + G+ ++
Sbjct: 85 LNVITTLVALCPLLGLLGTVTGMIEVFNVMAVTGGGDAKSMAGGVERATIPTMAGMVAAL 144
Query: 191 PSSIAYNKFIEDSKKFAMQMEG 212
A + + +E
Sbjct: 145 SGLFANTYIQRIADREQELLED 166
>gi|269959387|ref|ZP_06173770.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|269835824|gb|EEZ89900.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
Length = 159
Score = 56.7 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/187 (16%), Positives = 71/187 (37%), Gaps = 39/187 (20%)
Query: 27 IITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAA 86
++ +FI S + W+V++++ F + + + FW
Sbjct: 5 VLVAIFILSFMLWAVLLERWFYFAAVAPKAMKKAVSFWE--------------------- 43
Query: 87 IFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVG 146
++S K + + Q+ + R +++E + L + + + L+G
Sbjct: 44 ---------ERSEHKSWNAKMIRQEMVSR-------QDIEN-KKGLPIVKVLIALCPLLG 86
Query: 147 ILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKK 205
+LG V+GM+ F +A + + GI ++ I L G+ S+ + +K
Sbjct: 87 LLGTVVGMIQVFDILAVTGTGSPRAMASGISKATIPTLAGMVASLSGLFFSTRLDHLAKV 146
Query: 206 FAMQMEG 212
++E
Sbjct: 147 TTQKLED 153
>gi|83649580|ref|YP_438015.1| biopolymer transport protein [Hahella chejuensis KCTC 2396]
gi|83637623|gb|ABC33590.1| Biopolymer transport protein [Hahella chejuensis KCTC 2396]
Length = 145
Score = 56.7 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/78 (28%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVS-IPGIIESLISILLGL 186
+T+ L+ + S+ + VG+LG V G++ F I + V + + G+ +L + LGL
Sbjct: 52 LTKHLTTISSIGANAPYVGLLGTVAGILLTFYQIGQSGNVEVGAIMSGLALALKATALGL 111
Query: 187 CVSIPSSIAYNKFIEDSK 204
V+IP+ + YN +
Sbjct: 112 LVAIPTLMIYNALSRKVE 129
>gi|152993203|ref|YP_001358924.1| biopolymer ExbB/TolQ family transporter [Sulfurovum sp. NBC37-1]
gi|151425064|dbj|BAF72567.1| biopolymer transport protein, ExbB/TolQ family [Sulfurovum sp.
NBC37-1]
Length = 146
Score = 56.7 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 20/86 (23%), Positives = 38/86 (44%), Gaps = 2/86 (2%)
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYS--NNVVSIPGIIESLISILLG 185
I ++L + S+ + +G+LG VL ++ F I N + + +L + G
Sbjct: 54 IMKRLPTIASIGTNAPYIGLLGTVLAIILTFYIIGEQQDHVNAGDVMKHLALALKATAAG 113
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQME 211
L V+IP++ YN + Q +
Sbjct: 114 LVVAIPATAIYNALLSKVDTLLAQWD 139
>gi|78355501|ref|YP_386950.1| biopolymer transport proteins-like [Desulfovibrio desulfuricans
subsp. desulfuricans str. G20]
gi|78217906|gb|ABB37255.1| outer membrane transport energization protein ExbB [Desulfovibrio
desulfuricans subsp. desulfuricans str. G20]
Length = 221
Score = 56.7 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 41/190 (21%), Positives = 77/190 (40%), Gaps = 12/190 (6%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLA 85
I+ LL + + W++II +V R G + ++
Sbjct: 22 GILALLGVLCVWVWTLIILTAVALRDAAR-----------GTACTGAAAGQQDDGCPAPT 70
Query: 86 AIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLV 145
A + + +G R R++ + L ++T+ + + +SS L+
Sbjct: 71 AAGAAGLVAAHAVFCRGLRHGGLSLRLRRRIVRARMDMVLRQVTKNVGTILLLSSLAPLL 130
Query: 146 GILGAVLGMMGFFQSIAGYYSN-NVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSK 204
G+LG V GM+G F+++A S N GI ++L++ GL V+IPS +A S+
Sbjct: 131 GLLGTVEGMVGTFRALAEAGSADNAALTGGISKALVTTQGGLLVAIPSLLAGGILYRKSR 190
Query: 205 KFAMQMEGFA 214
K + +
Sbjct: 191 KLRNALRSVS 200
>gi|239996817|ref|ZP_04717341.1| TonB system biopolymer transport component [Alteromonas macleodii
ATCC 27126]
gi|332140185|ref|YP_004425923.1| TonB system biopolymer transport component [Alteromonas macleodii
str. 'Deep ecotype']
gi|327550207|gb|AEA96925.1| TonB system biopolymer transport component [Alteromonas macleodii
str. 'Deep ecotype']
Length = 172
Score = 56.4 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 29/197 (14%), Positives = 68/197 (34%), Gaps = 42/197 (21%)
Query: 17 FMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSL 76
F + G V +I LL + W +I+++++ + +Q ++ W+ +
Sbjct: 11 FTETGGQVLLVIGLLIF---VMWLLILERAMYLMVWHKQAKKEAIAMWTAR--------- 58
Query: 77 KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLG 136
D+ + ++ I++ + + +
Sbjct: 59 ----------------------ADRSSWFAEQVRQ-------KTISQLTMRLNGSIPIIQ 89
Query: 137 SMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIA 195
S+ + L+G++G V GM+ F +A S N G+ ++ I + G+ ++ A
Sbjct: 90 SLVALCPLLGLMGTVTGMIEVFDVMAIAGSGNARSMASGVSKATIPTMAGMVGALSGVFA 149
Query: 196 YNKFIEDSKKFAMQMEG 212
K +E
Sbjct: 150 ATWLTRMVKSERTHLED 166
>gi|157962471|ref|YP_001502505.1| MotA/TolQ/ExbB proton channel [Shewanella pealeana ATCC 700345]
gi|157847471|gb|ABV87970.1| MotA/TolQ/ExbB proton channel [Shewanella pealeana ATCC 700345]
Length = 174
Score = 56.4 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 27/210 (12%), Positives = 71/210 (33%), Gaps = 45/210 (21%)
Query: 6 LAIMDI--SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLF 63
L +MDI S+ G + + +LF+ W +++++
Sbjct: 2 LFLMDIWDSVRGFMASGGSVLWLVAGVLFVM----WVLMLERYWYLN------------- 44
Query: 64 WSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAR 123
W E K R+ + +++
Sbjct: 45 WISP-------------------------KEHKAIISAWEAREDSTSWYAHRIREAWVSQ 79
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISI 182
+++T ++ + ++ + ++G+LG V GM+ F +A + ++N + GI + +
Sbjct: 80 AKQDLTARMLLIKTLVAICPMIGLLGTVTGMISVFDVMAVHGTSNARMMAAGISMATMPT 139
Query: 183 LLGLCVSIPSSIAYNKFIEDSKKFAMQMEG 212
+ G+ ++ + K +++
Sbjct: 140 MAGMVAALSGVFFSTRLDAKMKISLAKLKD 169
>gi|282901468|ref|ZP_06309393.1| MotA/TolQ/ExbB proton channel [Cylindrospermopsis raciborskii
CS-505]
gi|281193747|gb|EFA68719.1| MotA/TolQ/ExbB proton channel [Cylindrospermopsis raciborskii
CS-505]
Length = 245
Score = 56.4 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 34/189 (17%), Positives = 68/189 (35%), Gaps = 17/189 (8%)
Query: 42 IIQKSVNFITLRRQFREFEQLFWSG--QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSC 99
I ++ ++ + Q ++ + S E + + + + +
Sbjct: 28 IFERLWFWLRILSQEKQVVERVLDAAIDSWEIATEIAQKATDQPIGRFLYA--------- 78
Query: 100 DKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQ 159
R + ++ A E+ + L S+ + L+G+LG VLG++ +
Sbjct: 79 --PLRLQKSDAETFKLALESTAAEEIAGMRRGEKLLESVIALSPLLGLLGTVLGLIQSLR 136
Query: 160 SIAGY---YSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANE 216
+I + GI ESLIS GL V+I + + Y F + N+
Sbjct: 137 AIKIGDLGTESTAGVTTGIGESLISTASGLIVAIVTLVFYRLFQSFAVNQVKVFNKAGND 196
Query: 217 FSAILSRQT 225
+L RQ+
Sbjct: 197 L-ELLYRQS 204
>gi|212635976|ref|YP_002312501.1| MotA/TolQ/ExbB proton channel [Shewanella piezotolerans WP3]
gi|212557460|gb|ACJ29914.1| MotA/TolQ/ExbB proton channel [Shewanella piezotolerans WP3]
Length = 160
Score = 56.4 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 17/121 (14%), Positives = 50/121 (41%), Gaps = 1/121 (0%)
Query: 93 SEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVL 152
E K R+ + +++ +++T ++ + ++ + ++G+LG V
Sbjct: 35 KEHKAIISAWEAREDSTSWYAHRIREAWVSQAKQDLTARMLLIKTLVAICPMIGLLGTVT 94
Query: 153 GMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
GM+ F +A + ++N + GI + + + G+ ++ + K +++
Sbjct: 95 GMISVFDVMAVHGTSNARMMAAGISMATMPTMAGMVAALSGVFFSTRLDAKMKISLAKLK 154
Query: 212 G 212
Sbjct: 155 D 155
>gi|52137552|emb|CAH33819.1| ExbB protein [Photobacterium damselae subsp. damselae]
Length = 223
Score = 56.4 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 36/199 (18%), Positives = 73/199 (36%), Gaps = 34/199 (17%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFIT------------LRRQFREFEQLFWSGQSLETVCKS 75
LFI S+L+ +++++ + + L Q R EQ L+ + +
Sbjct: 15 AWPLFICSLLTVMILLERFIQVLLCTGVGKTKINQILNNQNRHDEQA------LDHLAQQ 68
Query: 76 LKNHHNIGLAAIFM-SAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSF 134
L+N + I M + + K+ + A Q R ++ L
Sbjct: 69 LQNQRPLLYKGIAMLISHRHFAKALREDAAGMWLQQKRT-------------QLRSGLKL 115
Query: 135 LGSMSSAGLLVGILGAVLGMMGFFQSIAGYYS--NNVVSIPGIIESLISILLGLCVSIPS 192
L + L+G+LG VLG++ F+ IA G+ ++ + GL +++P+
Sbjct: 116 LSLIGVISPLLGLLGTVLGLIDMFKGIAMTTGSVTPNDLADGLGLAMRTTAAGLIIALPA 175
Query: 193 SIAYNKFIEDSKKFAMQME 211
+ ++E
Sbjct: 176 ITGAQLLGLWADSITSKLE 194
>gi|221135394|ref|ZP_03561697.1| TonB system biopolymer transport component [Glaciecola sp.
HTCC2999]
Length = 174
Score = 56.4 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 24/200 (12%), Positives = 66/200 (33%), Gaps = 43/200 (21%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLET 71
S+ G + + LF+ W +++++ ++ + + W +
Sbjct: 10 SVRDFIATGGDVLYFVAAALFLM----WVLMVERYWYLTSVFPKVKSDIIARWDAR---- 61
Query: 72 VCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEK 131
R+ D I+ + + +
Sbjct: 62 ----------------------------------ADTTSWYAHRIRDTWISEASDALNAR 87
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSI 190
+ + ++ + L+G+LG V GM+ F+++A + N + GI + I + G+ ++
Sbjct: 88 MLIIRTLVAMCPLIGLLGTVTGMITVFETMATQGTGNARLMAAGISMATIPTMAGMVAAL 147
Query: 191 PSSIAYNKFIEDSKKFAMQM 210
++ +K ++
Sbjct: 148 SGLFVSSRLEAKAKMAREKL 167
>gi|119774393|ref|YP_927133.1| MotA/TolQ/ExbB proton channel [Shewanella amazonensis SB2B]
gi|119766893|gb|ABL99463.1| MotA/TolQ/ExbB proton channel [Shewanella amazonensis SB2B]
Length = 175
Score = 56.4 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 24/202 (11%), Positives = 68/202 (33%), Gaps = 43/202 (21%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLET 71
S+ G + + +LF+ W +++++ W
Sbjct: 11 SVRGFMATGGDVLWLVAVVLFLM----WVLMLERFWYLN-------------WIA----- 48
Query: 72 VCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEK 131
LA I E S R+ + +++ +++ +
Sbjct: 49 --------PKQHLAIIASWEAREETTSW------------YAHRIREAWVSQAKQDMNAR 88
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSI 190
+ + ++ + ++G+LG V GM+ F +A ++N + GI ++ + + G+ ++
Sbjct: 89 MLMIKTLVALCPMIGLLGTVTGMITVFDVMAVQGTSNARMMAAGISQATMPTMAGMVAAL 148
Query: 191 PSSIAYNKFIEDSKKFAMQMEG 212
+ + +++
Sbjct: 149 SGVFFSTRLDAKMRISLERLKD 170
>gi|167948211|ref|ZP_02535285.1| Biopolymer transport protein [Endoriftia persephone
'Hot96_1+Hot96_2']
Length = 73
Score = 56.4 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 17/64 (26%), Positives = 31/64 (48%)
Query: 77 KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLG 136
+ G+A IF + E+ + +G P+ + R M VA++REL+ + L L
Sbjct: 10 EQGDLTGMAVIFRAGFREFARLKGRGQIEPMAVLQGAQRSMRVALSRELDNLERHLPSLA 69
Query: 137 SMSS 140
++ S
Sbjct: 70 TVGS 73
>gi|19577341|emb|CAD27898.1| ExbB protein [Photobacterium damselae subsp. piscicida]
gi|34494600|emb|CAE46551.1| ExbB protein [Photobacterium damselae subsp. piscicida]
Length = 223
Score = 56.0 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 36/199 (18%), Positives = 73/199 (36%), Gaps = 34/199 (17%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFIT------------LRRQFREFEQLFWSGQSLETVCKS 75
LFI S+L+ +++++ + + L Q R EQ L+ + +
Sbjct: 15 AWPLFICSLLTVMILLERFIQVLLCTGVGRTKINQILNNQNRHDEQA------LDHLAQQ 68
Query: 76 LKNHHNIGLAAIFM-SAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSF 134
L+N + I M + + K+ + A Q R ++ L
Sbjct: 69 LQNQRPLLYKGIAMLISHRHFAKALREDAAGMWLQQKRT-------------QLRSGLKL 115
Query: 135 LGSMSSAGLLVGILGAVLGMMGFFQSIAGYYS--NNVVSIPGIIESLISILLGLCVSIPS 192
L + L+G+LG VLG++ F+ IA G+ ++ + GL +++P+
Sbjct: 116 LSLIGVISPLLGLLGTVLGLIDMFKGIAMTTGSVTPNDLADGLGLAMQTTAAGLIIALPA 175
Query: 193 SIAYNKFIEDSKKFAMQME 211
+ ++E
Sbjct: 176 ITGAQLLGLWADSITSKLE 194
>gi|289671946|ref|ZP_06492836.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. syringae
FF5]
Length = 81
Score = 56.0 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 13/57 (22%), Positives = 23/57 (40%)
Query: 170 VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
V GI ++LI GL V+IP+ + + + ME A ++ +
Sbjct: 3 VLAGGISKALICTASGLIVAIPAIFFHRFLQSRVDELVVGMEQQAIRLVEVVQGDRD 59
>gi|269102796|ref|ZP_06155493.1| ferric siderophore transport system biopolymer transport protein
ExbB [Photobacterium damselae subsp. damselae CIP
102761]
gi|268162694|gb|EEZ41190.1| ferric siderophore transport system biopolymer transport protein
ExbB [Photobacterium damselae subsp. damselae CIP
102761]
Length = 223
Score = 56.0 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 36/199 (18%), Positives = 73/199 (36%), Gaps = 34/199 (17%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFIT------------LRRQFREFEQLFWSGQSLETVCKS 75
LFI S+L+ +++++ + + L Q R EQ L+ + +
Sbjct: 15 AWPLFICSLLTVMILLERFIQVLLCTGVGKTKINQILNNQNRHDEQA------LDHLAQQ 68
Query: 76 LKNHHNIGLAAIFM-SAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSF 134
L+N + I M + + K+ + A Q R ++ L
Sbjct: 69 LQNQRPLLYKGIAMLISHRHFAKALREDAAGMWLQQKRT-------------QLRSGLKL 115
Query: 135 LGSMSSAGLLVGILGAVLGMMGFFQSIAGYYS--NNVVSIPGIIESLISILLGLCVSIPS 192
L + L+G+LG VLG++ F+ IA G+ ++ + GL +++P+
Sbjct: 116 LSLIGVISPLLGLLGTVLGLIDMFKGIAMTTGSVTPNDLADGLGLAMRTTAAGLIIALPA 175
Query: 193 SIAYNKFIEDSKKFAMQME 211
+ ++E
Sbjct: 176 ITGAQLLGLWADSITSKLE 194
>gi|32169821|emb|CAD99193.1| ExbB protein [Photobacterium damselae subsp. damselae]
Length = 223
Score = 56.0 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 36/199 (18%), Positives = 73/199 (36%), Gaps = 34/199 (17%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFIT------------LRRQFREFEQLFWSGQSLETVCKS 75
LFI S+L+ +++++ + + L Q R EQ L+ + +
Sbjct: 15 AWPLFICSLLTVMILLERFIQVLLCTGVGRTKINQILNNQNRHDEQA------LDHLAQQ 68
Query: 76 LKNHHNIGLAAIFM-SAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSF 134
L+N + I M + + K+ + A Q R ++ L
Sbjct: 69 LQNQRPLLYKGIAMLISHRHFAKALREDAAGMWLQQKRT-------------QLRSGLKL 115
Query: 135 LGSMSSAGLLVGILGAVLGMMGFFQSIAGYYS--NNVVSIPGIIESLISILLGLCVSIPS 192
L + L+G+LG VLG++ F+ IA G+ ++ + GL +++P+
Sbjct: 116 LSLIGVISPLLGLLGTVLGLIDMFKGIAMTTGSVTPNDLADGLGLAMRTTAAGLIIALPA 175
Query: 193 SIAYNKFIEDSKKFAMQME 211
+ ++E
Sbjct: 176 ITGAQLLGLWADSITSKLE 194
>gi|296272105|ref|YP_003654736.1| MotA/TolQ/ExbB proton channel [Arcobacter nitrofigilis DSM 7299]
gi|296096280|gb|ADG92230.1| MotA/TolQ/ExbB proton channel [Arcobacter nitrofigilis DSM 7299]
Length = 172
Score = 56.0 bits (134), Expect = 5e-06, Method: Composition-based stats.
Identities = 25/112 (22%), Positives = 47/112 (41%), Gaps = 4/112 (3%)
Query: 101 KGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQS 160
K S +D I R + ++ L + +M L+G+LG V GM+ F
Sbjct: 57 KNIHSQNRFKDEIKRYF---LHSSSFKLKSGLDLIKTMIMVCPLIGLLGTVTGMIEVFDV 113
Query: 161 IAGYYSNNVVSIP-GIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
+A S++V S+ G+ + I + G+ V++ + K + + E
Sbjct: 114 MAITGSSDVKSMANGVSMATIPTMAGMAVALSGILFEKKLELSIRYKIQKFE 165
>gi|161407986|dbj|BAF94083.1| cytoplasmic membrane protein [Haemophilus parasuis]
gi|161407991|dbj|BAF94087.1| cytoplasmic membrane protein [Haemophilus parasuis]
gi|161407996|dbj|BAF94091.1| cytoplasmic membrane protein [Haemophilus parasuis]
gi|161408001|dbj|BAF94095.1| cytoplasmic membrane protein [Haemophilus parasuis]
gi|161408006|dbj|BAF94099.1| cytoplasmic membrane protein [Haemophilus parasuis]
gi|161408016|dbj|BAF94107.1| cytoplasmic membrane protein [Haemophilus parasuis]
gi|161408021|dbj|BAF94111.1| cytoplasmic membrane protein [Haemophilus parasuis]
gi|161408026|dbj|BAF94115.1| cytoplasmic membrane protein [Haemophilus parasuis]
Length = 52
Score = 55.6 bits (133), Expect = 5e-06, Method: Composition-based stats.
Identities = 13/44 (29%), Positives = 26/44 (59%)
Query: 178 SLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+L++ +GL V+IP+ +AYN ++ + ++ +ANE L
Sbjct: 1 ALVATAMGLFVAIPAVLAYNLITRLNRNLSQDLDHYANELFIYL 44
>gi|91793775|ref|YP_563426.1| MotA/TolQ/ExbB proton channel [Shewanella denitrificans OS217]
gi|91715777|gb|ABE55703.1| MotA/TolQ/ExbB proton channel [Shewanella denitrificans OS217]
Length = 175
Score = 55.6 bits (133), Expect = 5e-06, Method: Composition-based stats.
Identities = 26/210 (12%), Positives = 71/210 (33%), Gaps = 45/210 (21%)
Query: 6 LAIMDI--SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLF 63
L +MDI S+ G + + +LF+ W +++++
Sbjct: 3 LILMDIWDSVRGFMASGGDVLWLVAAVLFLM----WVLMLERYWYLN------------- 45
Query: 64 WSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAR 123
W + + K R+ + +++
Sbjct: 46 WISPT-------------------------QHKAIVSAWESREETTSWHAHRIREAWVSQ 80
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISI 182
+++T ++ + ++ + ++G+LG V GM+ F +A ++N + GI + +
Sbjct: 81 AKQDLTARMLLVKTLVAICPMIGLLGTVTGMISVFDVMAVQGTSNARLMAAGISMATMPT 140
Query: 183 LLGLCVSIPSSIAYNKFIEDSKKFAMQMEG 212
+ G+ ++ + K +++
Sbjct: 141 MAGMVAALSGVFFSTRLDAKMKISLEKLKD 170
>gi|254784602|ref|YP_003072030.1| lipid A export ATP-binding/permease MsbA [Teredinibacter turnerae
T7901]
gi|237683465|gb|ACR10729.1| lipid A export ATP-binding/permease protein MsbA [Teredinibacter
turnerae T7901]
Length = 175
Score = 55.6 bits (133), Expect = 5e-06, Method: Composition-based stats.
Identities = 22/101 (21%), Positives = 43/101 (42%), Gaps = 2/101 (1%)
Query: 114 DRMMDVA-IARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VS 171
R + A I+R +I + L LG+M + L+G+LG V GM+ F +A +
Sbjct: 69 SRQIRKALISRAASKINQNLDLLGTMVTLCPLLGLLGTVTGMIEVFNVLAVTGGGDAKSM 128
Query: 172 IPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEG 212
G+ + I + G+ ++ +++ +E
Sbjct: 129 ASGVSRATIPTMAGMVAALSGVFGTTLINRIAERENHMLED 169
>gi|197337226|ref|YP_002158451.1| TolQ protein [Vibrio fischeri MJ11]
gi|197314478|gb|ACH63927.1| TolQ protein [Vibrio fischeri MJ11]
Length = 177
Score = 55.6 bits (133), Expect = 6e-06, Method: Composition-based stats.
Identities = 17/86 (19%), Positives = 42/86 (48%), Gaps = 1/86 (1%)
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSN-NVVSIPGIIESLISILLG 185
E+ + L+F+ + S ++G+LG V GM+ F +A S+ + GI + + + G
Sbjct: 85 ELNQYLNFIKWLVSICPMLGLLGTVTGMISVFDVMATLGSSQPKLMASGISLATLPTMAG 144
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQME 211
+ ++ + + + + +++E
Sbjct: 145 MVAALAGLFVHARLSKTCRLRELKLE 170
>gi|330448369|ref|ZP_08312017.1| motA/TolQ/ExbB proton channel family protein [Photobacterium
leiognathi subsp. mandapamensis svers.1.1.]
gi|328492560|dbj|GAA06514.1| motA/TolQ/ExbB proton channel family protein [Photobacterium
leiognathi subsp. mandapamensis svers.1.1.]
Length = 177
Score = 55.6 bits (133), Expect = 6e-06, Method: Composition-based stats.
Identities = 15/85 (17%), Positives = 40/85 (47%), Gaps = 1/85 (1%)
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSN-NVVSIPGIIESLISILLGL 186
+ L+F+ + + ++G+LG V GM+ F +A S+ + GI + + + G+
Sbjct: 86 LNHNLNFIKVLVAICPMLGLLGTVTGMISVFDVMATQGSSQPKLMASGISLATLPTMAGM 145
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQME 211
++ + + + + +++E
Sbjct: 146 VAALAGMFVHARLSKACQMRELKLE 170
>gi|213621946|ref|ZP_03374729.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Typhi str. E98-2068]
Length = 48
Score = 55.2 bits (132), Expect = 6e-06, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 30/48 (62%)
Query: 8 IMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQ 55
+ D++I LF++ L VK I+ +L FSI SW++IIQ++ R+
Sbjct: 1 MTDMNILDLFLKASLLVKLIMLILIGFSIASWAIIIQRTRILNAAARE 48
>gi|269965895|ref|ZP_06179988.1| TonB system transport protein ExbB2 [Vibrio alginolyticus 40B]
gi|269829448|gb|EEZ83689.1| TonB system transport protein ExbB2 [Vibrio alginolyticus 40B]
Length = 159
Score = 55.2 bits (132), Expect = 6e-06, Method: Composition-based stats.
Identities = 32/188 (17%), Positives = 68/188 (36%), Gaps = 41/188 (21%)
Query: 27 IITLLFIFSILSWSVIIQKSVNFIT-LRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLA 85
++ +FI S + W+V++++ F + ++ W G+S
Sbjct: 5 VLVAIFILSFMLWAVLLERWFYFAAVAPKAMKKAVGS-WQGRS----------------- 46
Query: 86 AIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLV 145
E + K R I + I+ + L + + + L+
Sbjct: 47 --------EHQSWNAKMIRQEIVSRQDIEN-------------KKGLPIVKVLIALCPLL 85
Query: 146 GILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSK 204
G+LG V+GM+ F +A + + GI ++ I L G+ S+ ++ +K
Sbjct: 86 GLLGTVVGMIQVFDILAVTGTGSPRAMASGISKATIPTLAGMVASLSGLFFSSRLDHLAK 145
Query: 205 KFAMQMEG 212
++E
Sbjct: 146 VTTQKLED 153
>gi|167949015|ref|ZP_02536089.1| MotA/TolQ/ExbB proton channel [Endoriftia persephone
'Hot96_1+Hot96_2']
Length = 141
Score = 55.2 bits (132), Expect = 7e-06, Method: Composition-based stats.
Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 1/74 (1%)
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVS 189
L + +M ++G+LG V GM+ F +A + S N+ GI +LI+ + GL S
Sbjct: 58 YLGLVEAMVQILPMLGLLGTVEGMIDLFHVMASHGSGNIRGMSAGISTALITTMAGLVSS 117
Query: 190 IPSSIAYNKFIEDS 203
+ N
Sbjct: 118 LSGFYFVNDLRHRI 131
>gi|126668445|ref|ZP_01739401.1| hypothetical protein MELB17_13217 [Marinobacter sp. ELB17]
gi|126627062|gb|EAZ97703.1| hypothetical protein MELB17_13217 [Marinobacter sp. ELB17]
Length = 255
Score = 55.2 bits (132), Expect = 7e-06, Method: Composition-based stats.
Identities = 25/101 (24%), Positives = 44/101 (43%), Gaps = 4/101 (3%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVV 170
+ + L+ L + +++ L+G+LG V+GMM F ++ A +N
Sbjct: 111 VREELARQSQHALKPFEAPLKVIEVIAALAPLLGLLGTVMGMMSAFSAMSVAEGQANASQ 170
Query: 171 SIPGIIESLISILLGLCVSIP--SSIAYNKFIEDSKKFAMQ 209
GI E+L + GL V+IP + A+ +F M
Sbjct: 171 LSGGIYEALTTTAAGLVVAIPFAAIAAWAEFRLRRLNLMMN 211
>gi|167624641|ref|YP_001674935.1| MotA/TolQ/ExbB proton channel [Shewanella halifaxensis HAW-EB4]
gi|167354663|gb|ABZ77276.1| MotA/TolQ/ExbB proton channel [Shewanella halifaxensis HAW-EB4]
Length = 160
Score = 55.2 bits (132), Expect = 7e-06, Method: Composition-based stats.
Identities = 20/196 (10%), Positives = 65/196 (33%), Gaps = 43/196 (21%)
Query: 18 MQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLK 77
G + + +LF W +++++ + + + W +
Sbjct: 2 AAGGDVLWLVAAVLFAM----WVLMLERYWYLNWVSPKAHKAIITAWEARE--------- 48
Query: 78 NHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGS 137
R+ + +++ +++T ++ + +
Sbjct: 49 -----------------------------DSTSWYAHRIREAWVSQAKQDLTARMLLIKT 79
Query: 138 MSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAY 196
+ + ++G+LG V GM+ F +A + ++N + GI + + + G+ ++
Sbjct: 80 LVAICPMIGLLGTVTGMISVFDVMAVHGTSNARMMAAGISMATMPTMAGMVAALSGVFFS 139
Query: 197 NKFIEDSKKFAMQMEG 212
+ K +++
Sbjct: 140 TRLDAKMKISLAKLKD 155
>gi|332305718|ref|YP_004433569.1| MotA/TolQ/ExbB proton channel [Glaciecola agarilytica 4H-3-7+YE-5]
gi|332173047|gb|AEE22301.1| MotA/TolQ/ExbB proton channel [Glaciecola agarilytica 4H-3-7+YE-5]
Length = 450
Score = 55.2 bits (132), Expect = 7e-06, Method: Composition-based stats.
Identities = 38/209 (18%), Positives = 76/209 (36%), Gaps = 41/209 (19%)
Query: 19 QMGLAVKCIITLLFIFS-------ILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLET 71
G V +IT + I I++ ++I SG+
Sbjct: 267 HAGGVVGYVITAMLILGLLIGLYKIVTLTII----------------------SGKMRSQ 304
Query: 72 VCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEK 131
+ + L I D A + ++ +D AI +EL +I
Sbjct: 305 LNNTGNPSSGNPLGRILQV-------YKDNKASDA----ENLELKLDEAILKELPKIESG 353
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSI 190
++ + ++ L+G+LG VLGM+ FQ I + + + + G I +L++ G+ ++
Sbjct: 354 INIIKIFAAIAPLLGLLGTVLGMIATFQQITLFGTGDPRLMAGSISMALVTTAQGIIAAL 413
Query: 191 PSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
P + ++ SK ++ A
Sbjct: 414 PLILMHSIVAGRSKSIVHILDEQTAGIIA 442
>gi|91225001|ref|ZP_01260260.1| TonB system transport protein ExbB2 [Vibrio alginolyticus 12G01]
gi|262392632|ref|YP_003284486.1| ferric siderophore transport system biopolymer transport protein
ExbB [Vibrio sp. Ex25]
gi|91190247|gb|EAS76517.1| TonB system transport protein ExbB2 [Vibrio alginolyticus 12G01]
gi|262336226|gb|ACY50021.1| ferric siderophore transport system biopolymer transport protein
ExbB [Vibrio sp. Ex25]
Length = 175
Score = 55.2 bits (132), Expect = 7e-06, Method: Composition-based stats.
Identities = 32/188 (17%), Positives = 68/188 (36%), Gaps = 41/188 (21%)
Query: 27 IITLLFIFSILSWSVIIQKSVNFIT-LRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLA 85
++ +FI S + W+V++++ F + ++ W G+S
Sbjct: 21 VLVAIFILSFMLWAVLLERWFYFAAVAPKAMKKAVGS-WQGRS----------------- 62
Query: 86 AIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLV 145
E + K R I + I+ + L + + + L+
Sbjct: 63 --------EHQSWNAKMIRQEIVSRQDIEN-------------KKGLPIVKVLIALCPLL 101
Query: 146 GILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSK 204
G+LG V+GM+ F +A + + GI ++ I L G+ S+ ++ +K
Sbjct: 102 GLLGTVVGMIQVFDILAVTGTGSPRAMASGISKATIPTLAGMVASLSGLFFSSRLDHLAK 161
Query: 205 KFAMQMEG 212
++E
Sbjct: 162 VTTQKLED 169
>gi|55247874|gb|AAV48775.1| ExbB2 [Listonella anguillarum 775]
Length = 192
Score = 55.2 bits (132), Expect = 8e-06, Method: Composition-based stats.
Identities = 15/112 (13%), Positives = 46/112 (41%), Gaps = 8/112 (7%)
Query: 92 MSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAV 151
+ +W + + + I++ + + + L+ + + + ++G+LG V
Sbjct: 72 LEQWHQRAEHHSWYAHAIREG-------WLGEAQQMLRHNLNMIKLLVTLCPMLGLLGTV 124
Query: 152 LGMMGFFQSIAGYYSNN-VVSIPGIIESLISILLGLCVSIPSSIAYNKFIED 202
GM+ F +A S++ + GI + + + G+ ++ + + +
Sbjct: 125 TGMISVFDVMANQGSSDPKLMASGISLATLPTMAGMVAALAGMFVHARLAKK 176
>gi|209809661|ref|YP_002265200.1| TonB system transport protein ExbB3 [Aliivibrio salmonicida
LFI1238]
gi|208011224|emb|CAQ81657.1| TonB system transport protein ExbB3 [Aliivibrio salmonicida
LFI1238]
Length = 177
Score = 55.2 bits (132), Expect = 8e-06, Method: Composition-based stats.
Identities = 19/121 (15%), Positives = 53/121 (43%), Gaps = 8/121 (6%)
Query: 92 MSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAV 151
+++W + + + I+D ++ A + + L+ + + S ++G+LG V
Sbjct: 57 VTQWHQRHEHESWYAHAIRD---SWLNQAHIE----LNQNLNLIKWLVSICPMLGLLGTV 109
Query: 152 LGMMGFFQSIAGYYSN-NVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQM 210
GM+ F +A S+ + GI + + + G+ ++ + + + + +++
Sbjct: 110 TGMISVFDVMATLGSSQPKLMASGISLATLPTMAGMVAALAGLFVHARLAKTCRLRELKL 169
Query: 211 E 211
E
Sbjct: 170 E 170
>gi|93100132|emb|CAJ90743.1| ExbB2 protein [Listonella anguillarum]
Length = 192
Score = 55.2 bits (132), Expect = 8e-06, Method: Composition-based stats.
Identities = 15/112 (13%), Positives = 46/112 (41%), Gaps = 8/112 (7%)
Query: 92 MSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAV 151
+ +W + + + I++ + + + L+ + + + ++G+LG V
Sbjct: 72 LEQWHQRTEHHSWYAHAIREG-------WLGEAQQMLRHNLNMIKLLVTLCPMLGLLGTV 124
Query: 152 LGMMGFFQSIAGYYSNN-VVSIPGIIESLISILLGLCVSIPSSIAYNKFIED 202
GM+ F +A S++ + GI + + + G+ ++ + + +
Sbjct: 125 TGMISVFDVMANQGSSDPKLMASGISLATLPTMAGMVAALAGMFVHARLAKK 176
>gi|90020003|ref|YP_525830.1| Lipid A export ATP-binding/permease MsbA [Saccharophagus degradans
2-40]
gi|89949603|gb|ABD79618.1| MotA/TolQ/ExbB proton channel [Saccharophagus degradans 2-40]
Length = 175
Score = 55.2 bits (132), Expect = 8e-06, Method: Composition-based stats.
Identities = 28/188 (14%), Positives = 65/188 (34%), Gaps = 41/188 (21%)
Query: 27 IITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAA 86
I+ ++ + L W++I ++ + L
Sbjct: 21 ILLVIAFMTFLMWTLIFERLWFYK-------------------------------GSLGR 49
Query: 87 IFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVA-IARELEEITEKLSFLGSMSSAGLLV 145
+ + W+ ++ + R + VA I+R +I L +G+M + L+
Sbjct: 50 LVSDTVDAWEARKER--------KSWNARQIRVAMISRVSGKINANLDVVGTMVALCPLL 101
Query: 146 GILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSK 204
G+LG V GM+ F +A + G+ ++ I + G+ ++ + +
Sbjct: 102 GLLGTVTGMIEVFGVMAATGGGDAKSMASGVSKATIPTMAGMVAALSGVFGATLINQIAS 161
Query: 205 KFAMQMEG 212
+ +E
Sbjct: 162 RENQLLED 169
>gi|54302375|ref|YP_132368.1| putative TonB system transport protein ExbB2 [Photobacterium
profundum SS9]
gi|46915797|emb|CAG22568.1| putative TonB system transport protein ExbB2 [Photobacterium
profundum SS9]
Length = 176
Score = 54.8 bits (131), Expect = 9e-06, Method: Composition-based stats.
Identities = 14/82 (17%), Positives = 36/82 (43%), Gaps = 1/82 (1%)
Query: 121 IARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSN-NVVSIPGIIESL 179
+ + + L+ + + S ++G+LG V GM+ F +A S+ + GI +
Sbjct: 79 LNEARTALNQNLNLIKVLVSICPMLGLLGTVTGMISVFDVMATQGSSQPKLMASGISLAT 138
Query: 180 ISILLGLCVSIPSSIAYNKFIE 201
+ + G+ ++ + + +
Sbjct: 139 LPTMAGMVAALAGMFVHARLSK 160
>gi|33285442|emb|CAD68979.1| ExbB2 protein [Photobacterium damselae subsp. piscicida]
Length = 177
Score = 54.8 bits (131), Expect = 9e-06, Method: Composition-based stats.
Identities = 14/92 (15%), Positives = 43/92 (46%), Gaps = 1/92 (1%)
Query: 121 IARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSN-NVVSIPGIIESL 179
+ + + + + L+ + + S ++G++G V GM+ F +A S+ + GI +
Sbjct: 79 LNQAHQALNQNLNLIKVLVSICPMLGLMGTVTGMISVFDVMASLGSSQPKLMASGISLAT 138
Query: 180 ISILLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
+ + G+ ++ +++ + +++E
Sbjct: 139 LPTMAGMVAAVAGMFVHSRLSKACHWRELKLE 170
>gi|282898287|ref|ZP_06306278.1| MotA/TolQ/ExbB proton channel [Raphidiopsis brookii D9]
gi|281196818|gb|EFA71723.1| MotA/TolQ/ExbB proton channel [Raphidiopsis brookii D9]
Length = 244
Score = 54.8 bits (131), Expect = 9e-06, Method: Composition-based stats.
Identities = 37/190 (19%), Positives = 70/190 (36%), Gaps = 19/190 (10%)
Query: 42 IIQKSVNFITLRRQFREFEQLFWSG--QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSC 99
I ++ ++ + Q ++ + S E + + + +
Sbjct: 28 IFERLWFWLRILSQEKQVVERVLDAATDSWEIATEIAQKATEQPIGRFLYA--------- 78
Query: 100 DKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQ 159
R + ++ A E+ + L S+ + L+G+LG VLG++ +
Sbjct: 79 --PLRLQKSDAETFKLALESTAAEEIAGMRRGEKLLESVIALSPLLGLLGTVLGLIQSLR 136
Query: 160 SI----AGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFAN 215
+I G S V+ GI ESLIS GL V+I + + Y F + N
Sbjct: 137 AIRIGDLGTESTAGVTT-GIGESLISTASGLIVAIFTLVFYRLFQSFAVNQVKVFNKAGN 195
Query: 216 EFSAILSRQT 225
+ +L RQ+
Sbjct: 196 DL-ELLYRQS 204
>gi|237756722|ref|ZP_04585222.1| MotA/TolQ/ExbB proton channel family protein [Sulfurihydrogenibium
yellowstonense SS-5]
gi|237691118|gb|EEP60226.1| MotA/TolQ/ExbB proton channel family protein [Sulfurihydrogenibium
yellowstonense SS-5]
Length = 145
Score = 54.8 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 20/97 (20%), Positives = 44/97 (45%), Gaps = 3/97 (3%)
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYY-SNNVVSIPGIIESLISILLGLCV 188
+ L FL ++ L+G+LG V+G++ FQ + S I +L++ +G+ +
Sbjct: 51 KGLWFLDFAATTSPLLGLLGTVIGLIIAFQELGKKGVSGAGEISAAIGLALVATAIGIAL 110
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
S+ + + F ++ ++ +L+ QT
Sbjct: 111 SLWFYLWFKFFNSKIQEKKEDIKSRI--LMEVLNEQT 145
>gi|126669074|ref|ZP_01740006.1| oxaloacetate decarboxylase [Marinobacter sp. ELB17]
gi|126626452|gb|EAZ97117.1| oxaloacetate decarboxylase [Marinobacter sp. ELB17]
Length = 195
Score = 54.8 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 37/179 (20%), Positives = 66/179 (36%), Gaps = 19/179 (10%)
Query: 40 SVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHN-----IGLAAIFMSAMSE 94
+II ++ L + R+ W Q +SL L + +AM+
Sbjct: 22 YLIITGALFAPRLTSRLRKTLNQ-WQQQPSHQCAESLNGPWGWLTRCNPLPQMIRAAMTS 80
Query: 95 WKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGM 154
+ D + + L+ L + +++ L+G+LG V+GM
Sbjct: 81 SLEQRDGTE---------VREELARRSQHALKPFEAPLKIIEVIAALAPLLGLLGTVMGM 131
Query: 155 MGFFQSI--AGYYSNNVVSIPGIIESLISILLGLCVSIP--SSIAYNKFIEDSKKFAMQ 209
M F ++ A +N GI E+L + GL V+IP + A+ +F M
Sbjct: 132 MSAFSAMSVAEGQANASQLSGGIYEALTTTAAGLVVAIPFAAIAAWAEFRLRRLNLMMN 190
>gi|313894843|ref|ZP_07828403.1| conserved domain protein [Selenomonas sp. oral taxon 137 str.
F0430]
gi|312976524|gb|EFR41979.1| conserved domain protein [Selenomonas sp. oral taxon 137 str.
F0430]
Length = 154
Score = 54.4 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/131 (18%), Positives = 48/131 (36%), Gaps = 10/131 (7%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAI 87
+ LL + S+ ++ I + + + + R E V KSL+ LA
Sbjct: 14 MYLLLLCSLTVAAIAIDRFMLYRRASQGARALE---------AEVSKSLRGRKVNELA-P 63
Query: 88 FMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGI 147
+ A + + +D A + +L++L + + L+G+
Sbjct: 64 AAEGQDNMVAYLVRTALDARAAGEDVPMALDAAYGEAAMLLRARLNYLSMIVTMAPLMGL 123
Query: 148 LGAVLGMMGFF 158
LG + GM+ F
Sbjct: 124 LGTISGMIESF 134
>gi|90577868|ref|ZP_01233679.1| putative TonB system transport protein ExbB2 [Vibrio angustum S14]
gi|90440954|gb|EAS66134.1| putative TonB system transport protein ExbB2 [Vibrio angustum S14]
Length = 177
Score = 54.4 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 15/85 (17%), Positives = 40/85 (47%), Gaps = 1/85 (1%)
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGL 186
+ + L+F+ + + ++G+LG V GM+ F +A S+ + GI + + + G+
Sbjct: 86 LNQNLNFIKVLVAICPMLGLLGTVTGMISVFDVMATQGSSQPRLMASGISLATLPTMAGM 145
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQME 211
++ + + + + ++E
Sbjct: 146 VAALAGMFVHARLSKACQMREFKLE 170
>gi|54302898|ref|YP_132891.1| putative TonB system transport protein ExbB2 [Photobacterium
profundum SS9]
gi|46916322|emb|CAG23091.1| putative TonB system transport protein ExbB2 [Photobacterium
profundum SS9]
Length = 177
Score = 54.4 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 13/82 (15%), Positives = 36/82 (43%), Gaps = 1/82 (1%)
Query: 121 IARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESL 179
+ + + L+ + + + ++G+LG V GM+ F +A S+ + GI +
Sbjct: 79 LNEAHTSLNQNLNLIKVLVAICPMLGLLGTVTGMISVFDVMATQGSSQPRLMASGISLAT 138
Query: 180 ISILLGLCVSIPSSIAYNKFIE 201
+ + G+ ++ + + +
Sbjct: 139 LPTMAGMVAALAGMFVHARLAK 160
>gi|332307697|ref|YP_004435548.1| MotA/TolQ/ExbB proton channel [Glaciecola agarilytica 4H-3-7+YE-5]
gi|332175026|gb|AEE24280.1| MotA/TolQ/ExbB proton channel [Glaciecola agarilytica 4H-3-7+YE-5]
Length = 173
Score = 54.4 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 20/103 (19%), Positives = 44/103 (42%), Gaps = 4/103 (3%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV- 169
++I + M I+R + + + ++ + L+G++G V GM+ F +A S N
Sbjct: 67 EQIRQAM---ISRVSLRLGAGIPIIQALVALCPLLGLMGTVTGMIEVFDVMAISGSGNAR 123
Query: 170 VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEG 212
G+ ++ I + G+ ++ A +K +E
Sbjct: 124 SMASGVSKATIPTMAGMVGALSGVFASTWLARTTKSERTHLED 166
>gi|323497733|ref|ZP_08102748.1| TonB system transport protein ExbB2 [Vibrio sinaloensis DSM 21326]
gi|323317209|gb|EGA70205.1| TonB system transport protein ExbB2 [Vibrio sinaloensis DSM 21326]
Length = 189
Score = 54.4 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 17/110 (15%), Positives = 49/110 (44%), Gaps = 8/110 (7%)
Query: 110 QDRIDRMMDVA-------IARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA 162
++R +R A ++ +E+++ L+ + + + ++G+LG V GM+ F +A
Sbjct: 70 RERHERSSWYANAIRMGWLSHANQELSQNLALIKLLVTMFPMLGLLGTVTGMISVFDIMA 129
Query: 163 GYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
+ + + GI + + + G+ ++ + + + + +E
Sbjct: 130 IQGNGDPRLMASGIALATLPTMAGMVAALVGVFTHARLQKTCHRKMQTLE 179
>gi|207109779|ref|ZP_03243941.1| biopolymer transport protein [Helicobacter pylori HPKX_438_CA4C1]
Length = 112
Score = 54.4 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 13/63 (20%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI-AGYYSNNVVSIPGIIESLISILLGL 186
+ ++L+ + ++ S +G+LG V+G+M F + + + + + +L + +GL
Sbjct: 49 LHKRLTLVATIGSNAPYIGLLGTVMGIMLTFMDLGSASGIDTKAIMTNLALALKATGMGL 108
Query: 187 CVS 189
V+
Sbjct: 109 LVA 111
>gi|167586113|ref|ZP_02378501.1| MotA/TolQ/ExbB proton channel [Burkholderia ubonensis Bu]
Length = 66
Score = 54.4 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 9/60 (15%), Positives = 20/60 (33%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
+ + +L S+ SW ++ K+ + + Q FW +L+
Sbjct: 7 VIHYLESGDAVTHAVAYVLAAMSVASWCFLVVKAWLLVRAKWQGPGALAAFWRAPTLDAG 66
>gi|308049134|ref|YP_003912700.1| outer membrane transport energization protein ExbB [Ferrimonas
balearica DSM 9799]
gi|307631324|gb|ADN75626.1| outer membrane transport energization protein ExbB [Ferrimonas
balearica DSM 9799]
Length = 172
Score = 54.4 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 16/96 (16%), Positives = 42/96 (43%), Gaps = 1/96 (1%)
Query: 118 DVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-VVSIPGII 176
+ + R + L F+ ++ + ++G+LG V GM+ F +A + N + GI
Sbjct: 71 EGMLGRAERGLNANLDFIKALVAICPMLGLLGTVTGMISVFDVMAAQGTGNPKLMSAGIA 130
Query: 177 ESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEG 212
+ + + G+ ++ + + + S++ +
Sbjct: 131 MATLPTMAGMVAALAGLFVHARLQKYSQRALHGLAN 166
>gi|46198633|ref|YP_004300.1| tolQ protein [Thermus thermophilus HB27]
gi|55980653|ref|YP_143950.1| TolQ-type transport protein [Thermus thermophilus HB8]
gi|46196256|gb|AAS80673.1| tolQ protein [Thermus thermophilus HB27]
gi|55772066|dbj|BAD70507.1| probable TolQ-type transport protein [Thermus thermophilus HB8]
Length = 116
Score = 54.0 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVS 189
L LG ++ L+G+ G LGM+ F ++ G N + GI E+L + +GL V+
Sbjct: 40 RTLDRLGDLAQFAPLLGLFGTSLGMIRAFLAL-GQGGNPELLAQGIAEALTNTGMGLFVA 98
Query: 190 IPSS 193
+ +
Sbjct: 99 VVAY 102
>gi|109897387|ref|YP_660642.1| MotA/TolQ/ExbB proton channel [Pseudoalteromonas atlantica T6c]
gi|109699668|gb|ABG39588.1| outer membrane transport energization protein ExbB
[Pseudoalteromonas atlantica T6c]
Length = 173
Score = 54.0 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 19/103 (18%), Positives = 44/103 (42%), Gaps = 4/103 (3%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV- 169
++I + M I+R + + + ++ + L+G++G V GM+ F +A S +
Sbjct: 67 EQIRQAM---ISRVSLRLGAGIPIIQALVALCPLLGLMGTVTGMIEVFDVMAISGSGSAR 123
Query: 170 VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEG 212
G+ ++ I + G+ ++ A +K +E
Sbjct: 124 SMASGVSKATIPTMAGMVGALSGVFASTWLARTTKSERTHLED 166
>gi|161408011|dbj|BAF94103.1| cytoplasmic membrane protein [Haemophilus parasuis]
Length = 52
Score = 54.0 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 13/44 (29%), Positives = 26/44 (59%)
Query: 178 SLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
+L++ +GL V+IP+ +AYN ++ + ++ +ANE L
Sbjct: 1 ALVATAMGLFVAIPAVLAYNLIARLNRNLSQDLDHYANELFIYL 44
>gi|90414942|ref|ZP_01222905.1| putative TonB system transport protein [Photobacterium profundum
3TCK]
gi|90323942|gb|EAS40540.1| putative TonB system transport protein [Photobacterium profundum
3TCK]
Length = 176
Score = 54.0 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 14/82 (17%), Positives = 36/82 (43%), Gaps = 1/82 (1%)
Query: 121 IARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESL 179
+ + + L+ + + S ++G+LG V GM+ F +A S+ + GI +
Sbjct: 79 LNEARTALNQNLNLIKVLVSICPMLGLLGTVTGMISVFDVMATQGSSQPRLMASGISLAT 138
Query: 180 ISILLGLCVSIPSSIAYNKFIE 201
+ + G+ ++ + + +
Sbjct: 139 LPTMAGMVAALAGMFVHARLSK 160
>gi|94500770|ref|ZP_01307299.1| TonB system biopolymer transport component [Oceanobacter sp. RED65]
gi|94427092|gb|EAT12073.1| TonB system biopolymer transport component [Oceanobacter sp. RED65]
Length = 173
Score = 54.0 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 20/128 (15%), Positives = 49/128 (38%), Gaps = 8/128 (6%)
Query: 86 AIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLV 145
+ A+ EW+ ++ + I+ + +++A + + + L
Sbjct: 47 DLVAKAVEEWEARKERTSWQAHQIRLDLVASVEMA-------LETNTRTIKMLVGLCPLF 99
Query: 146 GILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSK 204
G+LG V GM+ F +A + + GI ++ I + G+ ++ A + +
Sbjct: 100 GLLGTVTGMIEVFDVMAFIGNGSPRAMASGISKATIPTMAGMVGALTGLFAQSLIQRHIQ 159
Query: 205 KFAMQMEG 212
+ +E
Sbjct: 160 RQKSNIED 167
>gi|149192231|ref|ZP_01870446.1| TolQ protein [Vibrio shilonii AK1]
gi|148833933|gb|EDL50955.1| TolQ protein [Vibrio shilonii AK1]
Length = 192
Score = 54.0 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 19/71 (26%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 143 LLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIE 201
++G+LG V GM+ F ++A S + GI + I + G+ ++ +AY++ +
Sbjct: 103 PMLGLLGTVTGMITVFDTLAAQGSAQPRLMAAGISMATIPTMAGMVAALSGMLAYSRIQK 162
Query: 202 DSKKFAMQMEG 212
S K +Q+E
Sbjct: 163 WSSKSLLQLEQ 173
>gi|325294972|ref|YP_004281486.1| MotA/TolQ/ExbB proton channel [Desulfurobacterium
thermolithotrophum DSM 11699]
gi|325065420|gb|ADY73427.1| MotA/TolQ/ExbB proton channel [Desulfurobacterium
thermolithotrophum DSM 11699]
Length = 163
Score = 54.0 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/95 (23%), Positives = 47/95 (49%), Gaps = 1/95 (1%)
Query: 117 MDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GI 175
++ + ++T L +A L+G+LG VLG+M F ++A +++V + GI
Sbjct: 57 VETYYHTFVSKLTRGKGVLSFTITASPLLGLLGTVLGIMESFVTMAEKGVSDIVEVSKGI 116
Query: 176 IESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQM 210
+L + LG+ V++ + + Y +K ++
Sbjct: 117 GLALEATALGIFVAVITLVYYYYLNGKVEKAKTEI 151
>gi|126741136|ref|ZP_01756817.1| MotA/TolQ/ExbB proton channel [Roseobacter sp. SK209-2-6]
gi|126717773|gb|EBA14494.1| MotA/TolQ/ExbB proton channel [Roseobacter sp. SK209-2-6]
Length = 210
Score = 54.0 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 30/157 (19%), Positives = 64/157 (40%), Gaps = 12/157 (7%)
Query: 64 WSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAR 123
W + + ++L + + AMS + + ++
Sbjct: 53 WGKGDVASAQQALAS-GRAPADRVLSYAMSALNEGLKPTLLTGE---------LERRGNE 102
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNNVVSIPGIIESLIS 181
E+ ++ + L ++ L+G+LG VLGM+ FQ + A +N + GI ++L++
Sbjct: 103 EVSQMNSLIRLLELIAMVSPLLGLLGTVLGMIQSFQELELAEGAANASLLAGGIWQALLT 162
Query: 182 ILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFS 218
GL V+IP+++A ++ A +E +
Sbjct: 163 TAAGLLVAIPAAVAAGLLAARIERAAQMIESTVGQLL 199
>gi|90414113|ref|ZP_01222095.1| putative TonB system transport protein [Photobacterium profundum
3TCK]
gi|90324785|gb|EAS41318.1| putative TonB system transport protein [Photobacterium profundum
3TCK]
Length = 177
Score = 54.0 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 13/82 (15%), Positives = 36/82 (43%), Gaps = 1/82 (1%)
Query: 121 IARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESL 179
+ + + L+ + + + ++G+LG V GM+ F +A S+ + GI +
Sbjct: 79 LNEAHTALNQNLNLIKVLVAICPMLGLLGTVTGMISVFDVMATQGSSQPRLMASGISLAT 138
Query: 180 ISILLGLCVSIPSSIAYNKFIE 201
+ + G+ ++ + + +
Sbjct: 139 LPTMAGMVAALAGMFVHARLAK 160
>gi|188996671|ref|YP_001930922.1| MotA/TolQ/ExbB proton channel [Sulfurihydrogenibium sp. YO3AOP1]
gi|188931738|gb|ACD66368.1| MotA/TolQ/ExbB proton channel [Sulfurihydrogenibium sp. YO3AOP1]
Length = 145
Score = 53.7 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 19/97 (19%), Positives = 44/97 (45%), Gaps = 3/97 (3%)
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYY-SNNVVSIPGIIESLISILLGLCV 188
+ L FL ++ L+G+LG V+G++ FQ + S I +L++ +G+ +
Sbjct: 51 KGLWFLDFAATTSPLLGLLGTVIGLIIAFQELGKKGVSGAGEISAAIGLALVATAIGIAL 110
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
S+ + + F ++ +++ +L+ Q
Sbjct: 111 SLWFYLWFKFFNSKIQEKKEEIKSRI--LMEVLNEQA 145
>gi|27364293|ref|NP_759821.1| ferric siderophore transport system, biopolymer transport protein
ExbB [Vibrio vulnificus CMCP6]
gi|37678431|ref|NP_933040.1| tonB system transport protein ExbB2 [Vibrio vulnificus YJ016]
gi|320157686|ref|YP_004190065.1| ferric siderophore transport system, biopolymer transport protein
ExbB [Vibrio vulnificus MO6-24/O]
gi|27360411|gb|AAO09348.1| Ferric siderophore transport system, biopolymer transport protein
ExbB [Vibrio vulnificus CMCP6]
gi|37197171|dbj|BAC93011.1| tonB system transport protein ExbB2 [Vibrio vulnificus YJ016]
gi|319932998|gb|ADV87862.1| ferric siderophore transport system, biopolymer transport protein
ExbB [Vibrio vulnificus MO6-24/O]
Length = 175
Score = 53.7 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 31/187 (16%), Positives = 69/187 (36%), Gaps = 39/187 (20%)
Query: 27 IITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAA 86
++ +F+ S + W V++++ FI +
Sbjct: 21 VLVAIFVLSFMLWVVLLERWFYFIAV-------------------------------APR 49
Query: 87 IFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVG 146
A++ W + + + + I+ I I+R+ E + L + + + L+G
Sbjct: 50 AMKQALATWTERTEHTSWNARMIRQEI-------ISRQDIENKKGLPIVKVLIALCPLLG 102
Query: 147 ILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKK 205
+LG V+GM+ F +A + + GI ++ I L G+ S+ + +K
Sbjct: 103 LLGTVVGMIQVFDILAIVGTGSPRAMASGISKATIPTLAGMVASLSGLFFSTRLDHLAKV 162
Query: 206 FAMQMEG 212
++E
Sbjct: 163 TTRKLED 169
>gi|113477847|ref|YP_723908.1| MotA/TolQ/ExbB proton channel [Trichodesmium erythraeum IMS101]
gi|110168895|gb|ABG53435.1| MotA/TolQ/ExbB proton channel [Trichodesmium erythraeum IMS101]
Length = 261
Score = 53.7 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 34/113 (30%), Positives = 51/113 (45%), Gaps = 6/113 (5%)
Query: 116 MMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI----AGYYSNNVVS 171
++ A EL + + L + + ++G+LG VLG++G SI G S V+
Sbjct: 93 ALEAAADDELASMRKGDKLLEGVIALAPMLGLLGTVLGLIGSLGSIRLGDLGTSSTAGVT 152
Query: 172 IPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+ GI E+LIS GL V+I S + Y F NE +L RQ
Sbjct: 153 V-GIGEALISTATGLVVAIFSLVFYRLFQSLLFNQMKVFRKAGNEL-ELLYRQ 203
>gi|167571244|ref|ZP_02364118.1| MotA/TolQ/ExbB proton channel family protein [Burkholderia
oklahomensis C6786]
Length = 87
Score = 53.3 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 14/81 (17%), Positives = 27/81 (33%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
I + +L S+ SW ++ K+ + +RQ FW +L+
Sbjct: 7 ILHYLESGDAVTHAVAYVLLAMSVASWCFLLVKAWVLVRAKRQGPAALAAFWRAATLDDG 66
Query: 73 CKSLKNHHNIGLAAIFMSAMS 93
+L+ + A A
Sbjct: 67 IAALRATDKERVFAPLAEAAR 87
>gi|120553129|ref|YP_957480.1| MotA/TolQ/ExbB proton channel [Marinobacter aquaeolei VT8]
gi|120322978|gb|ABM17293.1| outer membrane transport energization protein ExbB [Marinobacter
aquaeolei VT8]
Length = 265
Score = 53.3 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 37/190 (19%), Positives = 76/190 (40%), Gaps = 18/190 (9%)
Query: 10 DISIFALFMQMGLAVKCIITLLFIFSILSW-SVIIQKSVNFITLRRQFREFEQLFWSGQS 68
D ++MG V ++ + ++++ +++ + R+ R Q W
Sbjct: 13 DHGPLGQLVEMGGPVMIVLIAIAAIGVITFFYLMLFGTFYAPRFTRKLRYLVQQ-WQASP 71
Query: 69 LETVCKSLKNH-----HNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAR 123
+T + ++ L + ++ M+ K + + A ++D
Sbjct: 72 AQTSPEKIRADAGLLGRTNPLMHLLVNTMTASKCNPNINAVRETAVRDA---------QA 122
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGY--YSNNVVSIPGIIESLIS 181
LE L + +++ L+G+LG V+GMM F ++A +N GI E+L +
Sbjct: 123 ALEPFEAPLKIIEVIAALAPLLGLLGTVMGMMEAFSAMAATDGRANASQLSGGIYEALTT 182
Query: 182 ILLGLCVSIP 191
GL V+IP
Sbjct: 183 TAAGLVVAIP 192
>gi|195953081|ref|YP_002121371.1| MotA/TolQ/ExbB proton channel [Hydrogenobaculum sp. Y04AAS1]
gi|195932693|gb|ACG57393.1| MotA/TolQ/ExbB proton channel [Hydrogenobaculum sp. Y04AAS1]
Length = 145
Score = 53.3 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/102 (20%), Positives = 51/102 (50%), Gaps = 1/102 (0%)
Query: 109 IQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYY-SN 167
I+ I+R + + + ++ + + L ++G L+G+LG++L ++ F ++A SN
Sbjct: 35 IKKEINRSSEKEAYKLITKLKDSMWILDFGITSGPLLGLLGSILALIESFANLAERGISN 94
Query: 168 NVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQ 209
VV I +L++ G+C+++ + Y + + +
Sbjct: 95 PVVISKSIGFALVATAFGICLALWDLVFYKMLNDMIRNIKEE 136
>gi|75910770|ref|YP_325066.1| MotA/TolQ/ExbB proton channel [Anabaena variabilis ATCC 29413]
gi|75704495|gb|ABA24171.1| outer membrane transport energization protein ExbB [Anabaena
variabilis ATCC 29413]
Length = 239
Score = 53.3 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 37/201 (18%), Positives = 70/201 (34%), Gaps = 29/201 (14%)
Query: 41 VIIQKSVNFITLRRQFREFEQLFWSG--QSLETVCKSLKNHHNIGLAAIFMSAMS----- 93
VI ++ ++ L Q + + E + + + + +
Sbjct: 27 VIFERLWFWLRLFSQEKAIVDRVLDAAHDNWEIAADIARQATDQPIGRFLYAPLHLQKTD 86
Query: 94 --EWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAV 151
++ + + A + R +++++ IA S + +G LG
Sbjct: 87 AETFRLALESTAEDELAGMRRGEKLLEAVIALAPLLGLLGTVLGLIQSLRSIRIGDLGT- 145
Query: 152 LGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
+S AG + GI ESLIS GL V+I S + Y F Q++
Sbjct: 146 -------ESAAGVTT-------GIGESLISTAAGLIVAIVSLVFYRLFQSFV---VNQLK 188
Query: 212 GF--ANEFSAILSRQTEGNIS 230
F A +L RQ+ ++S
Sbjct: 189 VFRKAGNEMELLYRQSPPDLS 209
>gi|226196815|ref|ZP_03792394.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei Pakistan 9]
gi|225931075|gb|EEH27083.1| transporter, MotA/TolQ/ExbB proton channel family [Burkholderia
pseudomallei Pakistan 9]
Length = 57
Score = 53.3 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 11/41 (26%), Positives = 21/41 (51%)
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
GL V+IP+ +AYN ++ +++GFA + +
Sbjct: 1 MTAFGLVVAIPAVLAYNILGRLVRQLVEELDGFARDLHVFV 41
>gi|71280778|ref|YP_270632.1| biopolymer transport exbB protein [Colwellia psychrerythraea 34H]
gi|71146518|gb|AAZ26991.1| biopolymer transport exbB protein [Colwellia psychrerythraea 34H]
Length = 175
Score = 53.3 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 21/86 (24%), Positives = 38/86 (44%), Gaps = 1/86 (1%)
Query: 121 IARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESL 179
I+R ++ L+ + S+ L+G+LG V GM+ F +A S N G+ +
Sbjct: 77 ISRGTTKLNRNLALIQSLVVLCPLLGLLGTVTGMIEVFDVMAISGSGNARSMASGVSRAT 136
Query: 180 ISILLGLCVSIPSSIAYNKFIEDSKK 205
I + G+ S+ ++KK
Sbjct: 137 IPTMAGMVGSLSGVFTATWLRRNAKK 162
>gi|239995808|ref|ZP_04716332.1| hypothetical protein AmacA2_15176 [Alteromonas macleodii ATCC
27126]
Length = 128
Score = 53.3 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 20/91 (21%), Positives = 41/91 (45%)
Query: 119 VAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIES 178
+ +E+T++ + SA L+G+LG + G+ F + ++ V GI ++
Sbjct: 36 AQVRDGEKELTKREMVPAVLVSALPLMGLLGTIAGLQVSFTGMMSLGVDSQVVTGGIADA 95
Query: 179 LISILLGLCVSIPSSIAYNKFIEDSKKFAMQ 209
L + LGL ++IP + K+ +
Sbjct: 96 LFTTQLGLTLAIPGWLLLMFVNGAVKRAVAR 126
>gi|330943956|gb|EGH46161.1| TonB system transport protein ExbB2 [Pseudomonas syringae pv.
pisi str. 1704B]
Length = 53
Score = 53.3 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 15/40 (37%), Positives = 25/40 (62%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS 65
+I LL +FS+ +W + + K V F L+ Q R+F + FW+
Sbjct: 14 AVIWLLVLFSVATWGLALLKGVQFSRLKSQDRKFHKRFWA 53
>gi|37676083|ref|NP_936479.1| biopolymer transport protein ExbB1 [Vibrio vulnificus YJ016]
gi|37200623|dbj|BAC96449.1| biopolymer transport protein ExbB1 [Vibrio vulnificus YJ016]
Length = 258
Score = 52.9 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 33/196 (16%), Positives = 77/196 (39%), Gaps = 30/196 (15%)
Query: 29 TLLFIFSILSWSVIIQKSVNFI--------TLRRQFREFEQLFWSGQSLETVCKSLKNHH 80
L + S ++ ++I++ + +RRQ + Q +E + ++L N
Sbjct: 44 WPLILCSAVTVMIVIERLIQVALSIGVGKSAIRRQLSTISPT--NSQQIEQLAQALSNKR 101
Query: 81 NI---GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGS 137
+ G+A + A ++ KS + A + + ++ L L
Sbjct: 102 PLLYRGVAMLL--AHHDFAKSLREDAAGMW-------------LQEKRHQLHSGLRLLTL 146
Query: 138 MSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV--VSIPGIIESLISILLGLCVSIPSSIA 195
+ L+G+LG VLG++ F+ +A N G+ ++ + GL +++P+ +
Sbjct: 147 IGVISPLLGLLGTVLGLIEMFKGVAASSGNITPNDLAEGLGLAMRTTAAGLLIALPAIAS 206
Query: 196 YNKFIEDSKKFAMQME 211
+ + ++E
Sbjct: 207 AQLLGLWADRVMSKLE 222
>gi|330942186|gb|EGH44833.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. pisi str.
1704B]
Length = 151
Score = 52.9 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 21/108 (19%), Positives = 55/108 (50%), Gaps = 1/108 (0%)
Query: 104 RSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAG 163
++ G + +D +++ + L + ++++A L+G+LG +LG++ F+++A
Sbjct: 13 KNAQGSRRDLDDVIETQYLSTRAPLARSLWLIETITTAAPLLGLLGTILGIIDTFKALAS 72
Query: 164 YY-SNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQM 210
S+ GI +L + LG+ +++ + +N F + ++ Q+
Sbjct: 73 AGVSDPGQISAGIGTALFATGLGIAIALFCVVFHNYFQDSLERINDQL 120
>gi|109899296|ref|YP_662551.1| MotA/TolQ/ExbB proton channel [Pseudoalteromonas atlantica T6c]
gi|109701577|gb|ABG41497.1| outer membrane transport energization protein ExbB
[Pseudoalteromonas atlantica T6c]
Length = 450
Score = 52.9 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 38/209 (18%), Positives = 76/209 (36%), Gaps = 41/209 (19%)
Query: 19 QMGLAVKCIITLLFIFS-------ILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLET 71
G V +IT + I I++ ++I SG+
Sbjct: 267 HAGGVVGYVITAMLILGLLIGLYKIITLTII----------------------SGKMRSQ 304
Query: 72 VCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEK 131
+ + + L I D A + ++ +D AI +EL +I
Sbjct: 305 LNNTGNPSNGNPLGRILQV-------YKDNKATDA----ENLELKLDEAILKELPKIESG 353
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSI 190
++ + ++ L+G+LG VLGM+ FQ I + + + G I +L++ G+ ++
Sbjct: 354 INIIKIFAAIAPLLGLLGTVLGMIATFQQITLFGTGAPRLMAGSISMALVTTAQGIIAAL 413
Query: 191 PSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
P + ++ SK ++ A
Sbjct: 414 PLILMHSIVAGRSKSIVHILDEQTAGIIA 442
>gi|304320857|ref|YP_003854500.1| putative TonB system-dependent transport protein [Parvularcula
bermudensis HTCC2503]
gi|303299759|gb|ADM09358.1| putative TonB system-dependent transport protein [Parvularcula
bermudensis HTCC2503]
Length = 178
Score = 52.9 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 25/118 (21%), Positives = 47/118 (39%), Gaps = 2/118 (1%)
Query: 88 FMSAMSEWKKSCDKGARSPIGIQDRIDRMMD-VAIARELEEITEKLSFLGSMSSAGLLVG 146
F A S +K ++ + AI+ ++ T + + + + L+G
Sbjct: 47 FSVAGSRRRKEAEQDWEERGDHNSWYAFAIRDRAISEVMQTTTANFTVIRVLIAILPLLG 106
Query: 147 ILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDS 203
+LG V GM+ F +A S+N + GI + I + GL S+ + N +
Sbjct: 107 LLGTVTGMVEVFDVMASTGSSNARLMAGGITRATIPTMAGLVASLSGILLMNFIERQA 164
>gi|167740203|ref|ZP_02412977.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Burkholderia pseudomallei 14]
Length = 85
Score = 52.5 bits (125), Expect = 4e-05, Method: Composition-based stats.
Identities = 15/79 (18%), Positives = 27/79 (34%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
I + +L SI SW ++ K+ + +RQ FW +L+
Sbjct: 7 ILHYLASGDAVTHAVAYVLLAMSIASWCFLLVKAWVLVRAKRQGPAALAAFWRAATLDDG 66
Query: 73 CKSLKNHHNIGLAAIFMSA 91
+L+ + A A
Sbjct: 67 IAALRAADKERVFAPLAEA 85
>gi|262191108|ref|ZP_06049313.1| ferric siderophore transport system biopolymer transport protein
ExbB [Vibrio cholerae CT 5369-93]
gi|262032999|gb|EEY51532.1| ferric siderophore transport system biopolymer transport protein
ExbB [Vibrio cholerae CT 5369-93]
Length = 167
Score = 52.5 bits (125), Expect = 4e-05, Method: Composition-based stats.
Identities = 14/87 (16%), Positives = 35/87 (40%), Gaps = 2/87 (2%)
Query: 105 SPIGIQDRIDRMMDVA-IARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAG 163
R + + + + L+ + + + ++G+LG V GM+ F +A
Sbjct: 64 QRADQHSWFARSIREQWLGEAHNALNQNLNLIKVLVAICPMLGLLGTVTGMISVFDVMAT 123
Query: 164 YYSNN-VVSIPGIIESLISILLGLCVS 189
S++ + GI + + + G+ +
Sbjct: 124 QGSSDPKLMASGISLATLPTMAGMVAA 150
>gi|89073590|ref|ZP_01160112.1| putative ExbB-like protein [Photobacterium sp. SKA34]
gi|89050617|gb|EAR56103.1| putative ExbB-like protein [Photobacterium sp. SKA34]
Length = 233
Score = 52.5 bits (125), Expect = 4e-05, Method: Composition-based stats.
Identities = 35/199 (17%), Positives = 68/199 (34%), Gaps = 34/199 (17%)
Query: 28 ITLLFIFSILSWSVIIQKSVNF------------ITLRRQFREFEQLFWSGQSLETVCKS 75
L I S+L+ ++I++ L RQ R E L+ + +
Sbjct: 15 AWPLVICSVLTVMILIERLFQVLLCTGVGKTKVTALLARQNRHDEHA------LDKLTEE 68
Query: 76 LKNHHNIGLAAIFM-SAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSF 134
LK + I M A + K + A + IQ R + + +
Sbjct: 69 LKQQRPLLYKGIAMLIAHRNFTKPLREDAAAIWLIQKRTELRSGLRLLSL---------- 118
Query: 135 LGSMSSAGLLVGILGAVLGMMGFFQSIAGYYS--NNVVSIPGIIESLISILLGLCVSIPS 192
+ L+G+LG VLG++ F I+ G+ ++ + GL +++P+
Sbjct: 119 ---IGVISPLLGLLGTVLGLIDMFTGISHSTGSVTPSDLADGLGLAMRTTAAGLIIALPA 175
Query: 193 SIAYNKFIEDSKKFAMQME 211
+ ++E
Sbjct: 176 ITGAQLLGLWADNITAKLE 194
>gi|171463108|ref|YP_001797221.1| MotA/TolQ/ExbB proton channel [Polynucleobacter necessarius subsp.
necessarius STIR1]
gi|171192646|gb|ACB43607.1| MotA/TolQ/ExbB proton channel [Polynucleobacter necessarius subsp.
necessarius STIR1]
Length = 171
Score = 52.5 bits (125), Expect = 4e-05, Method: Composition-based stats.
Identities = 27/168 (16%), Positives = 63/168 (37%), Gaps = 13/168 (7%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREF-EQLFWSGQSL-E 70
++++ + I L I SIL ++ +++ RQ F + + SL
Sbjct: 1 MYSILLSASWP----IWPLLIISILGMAIALERFWYL----RQIHMFPKNCLETAFSLAN 52
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
+ S ++ +A + + + +C + + + + ++
Sbjct: 53 QIQNSSTVVSDLQVADLTQISPASPLLACALKEKLVGSSAEVALEGLQASAQTIWLKLDR 112
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFF---QSIAGYYSNNVVSIPGI 175
L L ++++ L+G+ G V+GM+ F +I G + GI
Sbjct: 113 YLGALATIATIAPLLGLFGTVVGMIEIFGSQGAINGAAGSPQQLAHGI 160
>gi|260774191|ref|ZP_05883106.1| ferric siderophore transport system biopolymer transport protein
ExbB [Vibrio metschnikovii CIP 69.14]
gi|260611152|gb|EEX36356.1| ferric siderophore transport system biopolymer transport protein
ExbB [Vibrio metschnikovii CIP 69.14]
Length = 235
Score = 52.5 bits (125), Expect = 4e-05, Method: Composition-based stats.
Identities = 28/192 (14%), Positives = 67/192 (34%), Gaps = 20/192 (10%)
Query: 28 ITLLFIFSILSWSVIIQKSVN----FITLRRQFREFEQLFW--SGQSLETVCKSLKNHHN 81
LF+ S+ + +I+++ + R +E + + L +
Sbjct: 15 AWPLFLCSLFATMIIVERLIQVLFTLGASRGSIGAALNQISPMHSDQIEALAEELSTRRS 74
Query: 82 IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSA 141
+ + M S +D + + ++ L L + +
Sbjct: 75 LLYKGVAM--------LLAHHDFSKGLREDTAGIWL----QDKRHQLHSGLRLLSLIGAI 122
Query: 142 GLLVGILGAVLGMMGFFQSIAGYYSNNV--VSIPGIIESLISILLGLCVSIPSSIAYNKF 199
L+G+LG VLG++ F+ +A N G+ ++ + GL +++P+ A
Sbjct: 123 SPLLGLLGTVLGLIEMFKGVALSSGNITPNDLADGLGIAMRTTAAGLLIAVPAITAAQLL 182
Query: 200 IEDSKKFAMQME 211
+ + ++E
Sbjct: 183 GAWADRVMAKLE 194
>gi|167721230|ref|ZP_02404466.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Burkholderia pseudomallei DM98]
Length = 97
Score = 52.5 bits (125), Expect = 4e-05, Method: Composition-based stats.
Identities = 13/72 (18%), Positives = 25/72 (34%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
I + +L SI SW ++ K+ + +RQ FW +L+
Sbjct: 7 ILHYLASGDAVTHAVAYVLLAMSIASWCFLLVKAWVLVRAKRQGPAALAAFWRAATLDDG 66
Query: 73 CKSLKNHHNIGL 84
+L+ +
Sbjct: 67 IAALRAADKERV 78
>gi|146281206|ref|YP_001171359.1| TonB system transport protein ExbB [Pseudomonas stutzeri A1501]
gi|145569411|gb|ABP78517.1| TonB system transport protein ExbB [Pseudomonas stutzeri A1501]
gi|327479359|gb|AEA82669.1| TonB system transport protein ExbB [Pseudomonas stutzeri DSM 4166]
Length = 181
Score = 52.5 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 27/198 (13%), Positives = 72/198 (36%), Gaps = 44/198 (22%)
Query: 17 FMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSL 76
FM G ++ L +L W+++ ++
Sbjct: 21 FMTAGGV---VMWALAGLCVLYWTLVFERLWFMRR------------------------- 52
Query: 77 KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVA-IARELEEITEKLSFL 135
+F + +++ + A P Q R + +A +A+ ++++ L
Sbjct: 53 ----------VFPHWVESRRQAWAQLADEPGSWQ----RAVRLAWLAQAQQQLSGPLRLS 98
Query: 136 GSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSI 194
++ + L+G+LG V GM+ F +A + N G+ ++ + + G+ ++I
Sbjct: 99 KTLVAMYPLLGLLGTVSGMIAVFDVLALSGTGNPRGMAAGVWQATLPTMAGMVLAITGLF 158
Query: 195 AYNKFIEDSKKFAMQMEG 212
+ + +++ ++
Sbjct: 159 SLARLERIARQSLDRLAD 176
>gi|90407978|ref|ZP_01216151.1| TonB system biopolymer transport component [Psychromonas sp. CNPT3]
gi|90310916|gb|EAS39028.1| TonB system biopolymer transport component [Psychromonas sp. CNPT3]
Length = 167
Score = 52.5 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 16/68 (23%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Query: 143 LLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIED 202
L+G+LG V GM+ FQ++ + + GI +L++ L GL ++ + +
Sbjct: 89 PLLGLLGTVDGMVESFQNM-QQTNLQLHLAGGIYHALLTTLAGLVTALSGLYLIHDLQQR 147
Query: 203 SKKFAMQM 210
K+ ++
Sbjct: 148 KNKYIHKL 155
>gi|157963337|ref|YP_001503371.1| MotA/TolQ/ExbB proton channel [Shewanella pealeana ATCC 700345]
gi|157848337|gb|ABV88836.1| MotA/TolQ/ExbB proton channel [Shewanella pealeana ATCC 700345]
Length = 172
Score = 52.1 bits (124), Expect = 6e-05, Method: Composition-based stats.
Identities = 21/129 (16%), Positives = 49/129 (37%), Gaps = 4/129 (3%)
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEK-LSFLGSMSSAG 142
L + + E + + +D +++ + R+ + L + ++
Sbjct: 39 LWLVSRALFKETSLEAKQSGLTTE--RDWLNQRLRSLALRQAQAQQYGDLQGVKLLAMVA 96
Query: 143 LLVGILGAVLGMMGFFQSIAGYY-SNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIE 201
L+G+LG V GM+ F + Y + V GI ++++ GL V + +I +
Sbjct: 97 PLLGLLGTVSGMIAMFDAGGNYGFHDPAVISAGISMAMVTTQTGLFVGLTGAILAFFWQR 156
Query: 202 DSKKFAMQM 210
+ +
Sbjct: 157 KLNRVDTNL 165
>gi|91201663|emb|CAJ74723.1| conserved hypothetical protein [Candidatus Kuenenia
stuttgartiensis]
Length = 220
Score = 52.1 bits (124), Expect = 6e-05, Method: Composition-based stats.
Identities = 27/204 (13%), Positives = 76/204 (37%), Gaps = 8/204 (3%)
Query: 12 SIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLET 71
SI ++ + ++ LL + + +II F R++ + + + +E+
Sbjct: 9 SILSVISSA--MLYPVMILLIVLFVW---MIITTGEFFSEYRKRKKHTLKR-EMKELIES 62
Query: 72 VCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEK 131
+ +SL + + +++ + G +D ++ + + +++
Sbjct: 63 LIESLSQKKPEISPFLKREMPAYFREFLGEFIDELKGDKDARGIRIEYLLQSKEQKMARS 122
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIP 191
L L M G +G++G ++ M +++ + + II + + ++GL + I
Sbjct: 123 LDKLRLMVRIGPTLGLMGTIIPMGPALSALS--KGDLEMLSSNIIIAFTTTVVGLAIGIT 180
Query: 192 SSIAYNKFIEDSKKFAMQMEGFAN 215
+ + +E F
Sbjct: 181 AYFLSMMKNRWIHEDIKNIEYFTE 204
>gi|167945940|ref|ZP_02533014.1| putative adventurous gliding motility protein R [Endoriftia
persephone 'Hot96_1+Hot96_2']
Length = 138
Score = 52.1 bits (124), Expect = 6e-05, Method: Composition-based stats.
Identities = 17/130 (13%), Positives = 51/130 (39%), Gaps = 15/130 (11%)
Query: 29 TLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFW---SGQSLETVCKSLKNHHNIGLA 85
LL ++ I++ + + R + F + + KS + + L
Sbjct: 21 ILLIFA--AGLAIAIERYLYLSSARLRNNRFWTRVLPQLNEGDFKQALKSAAD-SSTALG 77
Query: 86 AIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLV 145
I + + + + + ++ M+ + E+ ++ +L ++++ L+
Sbjct: 78 RIMVYGLDRVRSARRRSD---------LEMAMEEGLMEEIPRFEKRTHYLSTLANIATLL 128
Query: 146 GILGAVLGMM 155
G+LG ++G++
Sbjct: 129 GLLGTIIGLI 138
>gi|27367955|ref|NP_763482.1| ferric siderophore transport system, biopolymer transport protein
ExbB [Vibrio vulnificus CMCP6]
gi|320158226|ref|YP_004190604.1| ferric siderophore transport system biopolymer transport protein
ExbB [Vibrio vulnificus MO6-24/O]
gi|27359528|gb|AAO08472.1| Ferric siderophore transport system, biopolymer transport protein
ExbB [Vibrio vulnificus CMCP6]
gi|319933538|gb|ADV88401.1| ferric siderophore transport system biopolymer transport protein
ExbB [Vibrio vulnificus MO6-24/O]
Length = 230
Score = 51.7 bits (123), Expect = 7e-05, Method: Composition-based stats.
Identities = 32/194 (16%), Positives = 75/194 (38%), Gaps = 26/194 (13%)
Query: 29 TLLFIFSILSWSVIIQKSVNFI--------TLRRQFREFEQLFWSGQSLETVCKSLKNHH 80
L + S ++ ++I++ + +RRQ + Q +E + ++L N
Sbjct: 16 WPLILCSAVTVMIVIERLIQVALSIGVGKSAIRRQLSTISPT--NSQQIEQLAQALSNKR 73
Query: 81 NIGLAAIFM-SAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMS 139
+ + M A ++ KS + A + + ++ L L +
Sbjct: 74 PLLYRGVAMLLAHHDFAKSLREDAAGMW-------------LQEKRHQLHSGLRLLTLIG 120
Query: 140 SAGLLVGILGAVLGMMGFFQSIAGYYSNNV--VSIPGIIESLISILLGLCVSIPSSIAYN 197
L+G+LG VLG++ F+ +A N G+ ++ + GL +++P+ +
Sbjct: 121 VISPLLGLLGTVLGLIEMFKGVAASSGNITPNDLAEGLGLAMRTTAAGLLIALPAIASAQ 180
Query: 198 KFIEDSKKFAMQME 211
+ + ++E
Sbjct: 181 LLGLWADRVMSKLE 194
>gi|332708045|ref|ZP_08428040.1| outer membrane transport energization protein ExbB [Lyngbya
majuscula 3L]
gi|332353191|gb|EGJ32736.1| outer membrane transport energization protein ExbB [Lyngbya
majuscula 3L]
Length = 212
Score = 51.7 bits (123), Expect = 7e-05, Method: Composition-based stats.
Identities = 44/195 (22%), Positives = 73/195 (37%), Gaps = 18/195 (9%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+ I L + G+A + L SIL+ I ++ + T+ G +
Sbjct: 1 MDIVELIAKGGIA----MWPLLALSILTMGTIFERIWFWATI---------ALREGIIVN 47
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
V ++ ++ S + R + ++ A EL +
Sbjct: 48 RVLEAAAGSWHVARQIALESRRQPIGRYLYAPLRLNNPDPEVFRLALESAADDELAAMRR 107
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSI----AGYYSNNVVSIPGIIESLISILLGL 186
L ++ + L+G+LG VLG++ SI G S + V+ GI ESLIS GL
Sbjct: 108 GDKLLEAVIALAPLLGLLGTVLGLINSLGSIRISDLGTASTDGVT-QGIGESLISTATGL 166
Query: 187 CVSIPSSIAYNKFIE 201
V+I S Y F
Sbjct: 167 IVAIISLAFYRLFQA 181
>gi|307153208|ref|YP_003888592.1| MotA/TolQ/ExbB proton channel [Cyanothece sp. PCC 7822]
gi|306983436|gb|ADN15317.1| MotA/TolQ/ExbB proton channel [Cyanothece sp. PCC 7822]
Length = 227
Score = 51.3 bits (122), Expect = 9e-05, Method: Composition-based stats.
Identities = 39/179 (21%), Positives = 68/179 (37%), Gaps = 16/179 (8%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLF--WSGQSLETVCKSLKNHHNIGLA 85
+ L SIL+ S II++ + + + + + +S E K +++ L
Sbjct: 14 MWPLLFLSILALSTIIERIWFWSRVLLKQGQVLNRIMDSAARSWEMTPKIARDYRRHPLG 73
Query: 86 AIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLV 145
+ + P D ++ A +L + L ++ + L+
Sbjct: 74 EYLYAPLK-------LNNPDP----DLFHLALETAADDQLNTMRRGDKLLEAVVALAPLL 122
Query: 146 GILGAVLGMMGFFQSIAGY---YSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIE 201
G+LG VLG++ +I S+ GI ESLIS GL V+I S Y F
Sbjct: 123 GLLGTVLGLIKSLSNIQLSDLGTSSTAGVTLGISESLISTAAGLIVAISSLAFYRIFQA 181
>gi|167817418|ref|ZP_02449098.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Burkholderia pseudomallei 91]
Length = 82
Score = 51.3 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 13/72 (18%), Positives = 25/72 (34%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
I + +L SI SW ++ K+ + +RQ FW +L+
Sbjct: 7 ILHYLASGDAVTHAVAYVLLAMSIASWCFLLVKAWVLVRAKRQGPAALAAFWRAATLDDG 66
Query: 73 CKSLKNHHNIGL 84
+L+ +
Sbjct: 67 IAALRAADKERV 78
>gi|88860777|ref|ZP_01135414.1| hypothetical protein PTD2_05950 [Pseudoalteromonas tunicata D2]
gi|88817372|gb|EAR27190.1| hypothetical protein PTD2_05950 [Pseudoalteromonas tunicata D2]
Length = 127
Score = 51.3 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYS--NNVVSIPGIIESLISILLGL 186
+ + L + +A L+G+LG ++G++ F +++ S + V GI +L + LGL
Sbjct: 42 QQWIETLRCLINALPLLGLLGTIMGLLQSFFAMSQGGSLSASSVLTQGIANALWTTQLGL 101
Query: 187 CVSIPSSIAYNKFIE 201
+++P+ + + F
Sbjct: 102 VLAVPAWLLLSYFNN 116
>gi|229514327|ref|ZP_04403788.1| ferric siderophore transport system biopolymer transport protein
ExbB [Vibrio cholerae TMA 21]
gi|229348307|gb|EEO13265.1| ferric siderophore transport system biopolymer transport protein
ExbB [Vibrio cholerae TMA 21]
Length = 228
Score = 51.0 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 31/193 (16%), Positives = 69/193 (35%), Gaps = 22/193 (11%)
Query: 28 ITLLFIFSILSWSVIIQKSVN----FITLRRQFREFEQLFW--SGQSLETVCKSLKNHHN 81
LFI S L+ ++ ++ + R+ Q + + L + + +
Sbjct: 15 AWPLFICSALTVMLLAERLFQVLLSLTVGKGAIRQALQATSPKNSKQLAELTEHFASKRP 74
Query: 82 IGLAAIFM-SAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSS 140
+ + M A ++ KS + A + R L L +
Sbjct: 75 VLYRGVAMLLAHHQFDKSLREDAAGIWLQEQRHQF-------------NSGLRLLTLIGV 121
Query: 141 AGLLVGILGAVLGMMGFFQSIAGYYSNNV--VSIPGIIESLISILLGLCVSIPSSIAYNK 198
L+G+LG VLG++ F+ +A + V G+ ++ + GL +++P+
Sbjct: 122 ISPLLGLLGTVLGLIEMFKGVAATTGSITPNVLADGLGVAMYTTAAGLLIAVPAVAGAQL 181
Query: 199 FIEDSKKFAMQME 211
+ + ++E
Sbjct: 182 LNLWADRTMAKLE 194
>gi|189912997|ref|YP_001964886.1| TolQ-like transport protein [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|189913324|ref|YP_001964553.1| Putative transport protein, MotA/TolQ/ExbB proton channel family;
putative membrane protein [Leptospira biflexa serovar
Patoc strain 'Patoc 1 (Paris)']
gi|106879754|emb|CAJ90446.1| putative transport protein MotA-TolQ-ExbB [Leptospira biflexa
serovar Patoc strain 'Patoc 1 (Paris)']
gi|167777673|gb|ABZ95973.1| TolQ-like transport protein [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167781392|gb|ABZ99689.1| Putative transport protein, MotA/TolQ/ExbB proton channel family;
putative membrane protein [Leptospira biflexa serovar
Patoc strain 'Patoc 1 (Paris)']
Length = 154
Score = 51.0 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 18/91 (19%), Positives = 43/91 (47%), Gaps = 1/91 (1%)
Query: 118 DVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGII 176
+ + + S+ +++S +L+G+LG V+G+ F + ++ + GI
Sbjct: 53 EEELDLFFSPLERIASWFPTIASLSMLLGLLGTVIGINTAFGEMEAQGKVSLEILAGGIK 112
Query: 177 ESLISILLGLCVSIPSSIAYNKFIEDSKKFA 207
++L + ++GL V+IPS + + +
Sbjct: 113 DALNTTIVGLLVAIPSLFFHRVIENKIRYIS 143
>gi|213418431|ref|ZP_03351497.1| colicin uptake protein TolQ [Salmonella enterica subsp. enterica
serovar Typhi str. E01-6750]
Length = 51
Score = 51.0 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 16/39 (41%), Positives = 26/39 (66%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNF 49
++I LF++ L VK I+ +L FSI SW++IIQ++
Sbjct: 1 MNILDLFLKASLLVKLIMLILIGFSIASWAIIIQRTRIL 39
>gi|77361992|ref|YP_341566.1| biopolymer transport protein [Pseudoalteromonas haloplanktis
TAC125]
gi|76876903|emb|CAI89120.1| putative biopolymer transport protein, MotA/TolQ/ExbB proton
channel domain [Pseudoalteromonas haloplanktis TAC125]
Length = 183
Score = 51.0 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 29/203 (14%), Positives = 66/203 (32%), Gaps = 35/203 (17%)
Query: 18 MQMGLAVKCII-TLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSL 76
MQ I+ L + SI++ ++++++S I + Q ++ L
Sbjct: 1 MQSTFNAVGIMAWPLLLVSIIALAIVLERSTILIIAKWQLKQ---------------HKL 45
Query: 77 KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLG 136
+ + ++ + D R+ +++ L +
Sbjct: 46 GTSQ-FAITLQAKQLLHSEQRLQWCQLYLQDCLIDWRKRLNILSLLASLSPL-------- 96
Query: 137 SMSSAGLLVGILGAVLGMMGFFQSIAGYYS--NNVVSIPGIIESLISILLGLCVSIPSSI 194
+G+LG V G++ F+ IA + G+ E++ S + GL ++IP +
Sbjct: 97 --------MGLLGTVWGLVVMFKRIAETNQAVTPALLADGLWEAMYSTMAGLVIAIPCLL 148
Query: 195 AYNKFIEDSKKFAMQMEGFANEF 217
+ N
Sbjct: 149 VSGLLNTILEGLQNDFTRIINHL 171
>gi|153212406|ref|ZP_01948188.1| TonB system transport protein ExbB1 [Vibrio cholerae 1587]
gi|229522441|ref|ZP_04411857.1| ferric siderophore transport system biopolymer transport protein
ExbB [Vibrio cholerae TM 11079-80]
gi|229526532|ref|ZP_04415936.1| ferric siderophore transport system biopolymer transport protein
ExbB [Vibrio cholerae bv. albensis VL426]
gi|254224773|ref|ZP_04918389.1| TonB system transport protein ExbB1 [Vibrio cholerae V51]
gi|297580032|ref|ZP_06941959.1| TonB system transporter ExbB1 [Vibrio cholerae RC385]
gi|124116614|gb|EAY35434.1| TonB system transport protein ExbB1 [Vibrio cholerae 1587]
gi|125622836|gb|EAZ51154.1| TonB system transport protein ExbB1 [Vibrio cholerae V51]
gi|229336690|gb|EEO01708.1| ferric siderophore transport system biopolymer transport protein
ExbB [Vibrio cholerae bv. albensis VL426]
gi|229340426|gb|EEO05432.1| ferric siderophore transport system biopolymer transport protein
ExbB [Vibrio cholerae TM 11079-80]
gi|297535678|gb|EFH74512.1| TonB system transporter ExbB1 [Vibrio cholerae RC385]
Length = 228
Score = 51.0 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 31/193 (16%), Positives = 68/193 (35%), Gaps = 22/193 (11%)
Query: 28 ITLLFIFSILSWSVIIQKSVN----FITLRRQFREFEQLFW--SGQSLETVCKSLKNHHN 81
LFI S L+ ++ ++ + R Q + + L + + +
Sbjct: 15 AWPLFICSALTVMLLAERLFQVLLSLTVGKGAIRHALQATSPKNSKQLAELTEHFASKRP 74
Query: 82 IGLAAIFM-SAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSS 140
+ + M A ++ KS + A + R L L +
Sbjct: 75 VLYRGVAMLLAHHQFDKSLREDAAGIWLQEQRHQF-------------NSGLRLLTLIGV 121
Query: 141 AGLLVGILGAVLGMMGFFQSIAGYYSNNV--VSIPGIIESLISILLGLCVSIPSSIAYNK 198
L+G+LG VLG++ F+ +A + V G+ ++ + GL +++P+
Sbjct: 122 ISPLLGLLGTVLGLIEMFKGVAATTGSITPNVLADGLGVAMYTTAAGLLIAVPAVAGAQL 181
Query: 199 FIEDSKKFAMQME 211
+ + ++E
Sbjct: 182 LNLWADRTMAKLE 194
>gi|94264344|ref|ZP_01288136.1| MotA/TolQ/ExbB proton channel [delta proteobacterium MLMS-1]
gi|93455238|gb|EAT05451.1| MotA/TolQ/ExbB proton channel [delta proteobacterium MLMS-1]
Length = 276
Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/104 (19%), Positives = 43/104 (41%), Gaps = 8/104 (7%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ I R+++ + R L +L+ L S+ G +G V+G++ ++ +
Sbjct: 121 EEIRRILEKSYERYLSSREARLNILASLVRLSQSFGFMGTVVGLIIVLGNL----QDMAN 176
Query: 171 SIPGIIESLISILLGLCVSIPSSIAYNKFIED-SKKFAMQMEGF 213
G+ +L + L GL + + Y ++ +ME F
Sbjct: 177 IGSGVSVALFTTLYGLLFA---NFIYIPIQRRYAETIRREMETF 217
>gi|167564102|ref|ZP_02357018.1| MotA/TolQ/ExbB proton channel family protein [Burkholderia
oklahomensis EO147]
Length = 83
Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 13/77 (16%), Positives = 26/77 (33%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
I + +L S+ SW ++ K+ + +RQ FW +L+
Sbjct: 7 ILHYLESGDAVTHAVAYVLLAMSVASWCFLLVKAWVLVRAKRQGPAALAAFWRAATLDDG 66
Query: 73 CKSLKNHHNIGLAAIFM 89
+L+ + A
Sbjct: 67 IAALRATDKERVFAPLA 83
>gi|94268093|ref|ZP_01291084.1| MotA/TolQ/ExbB proton channel [delta proteobacterium MLMS-1]
gi|93451733|gb|EAT02501.1| MotA/TolQ/ExbB proton channel [delta proteobacterium MLMS-1]
Length = 276
Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/104 (19%), Positives = 43/104 (41%), Gaps = 8/104 (7%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ I R+++ + R L +L+ L S+ G +G V+G++ ++ +
Sbjct: 121 EEIRRILEKSYERYLSSREARLNILASLVRLSQSFGFMGTVVGLIIVLGNL----QDMAN 176
Query: 171 SIPGIIESLISILLGLCVSIPSSIAYNKFIED-SKKFAMQMEGF 213
G+ +L + L GL + + Y ++ +ME F
Sbjct: 177 IGSGVSVALFTTLYGLLFA---NFIYIPIQRRYAETIRREMETF 217
>gi|207109390|ref|ZP_03243552.1| biopolymer transport protein [Helicobacter pylori HPKX_438_CA4C1]
Length = 75
Score = 50.2 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 13/73 (17%), Positives = 31/73 (42%), Gaps = 1/73 (1%)
Query: 148 LGAVLGMMGFFQSIAGYYSNN-VVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKF 206
G V+ ++ F ++ + V P I ++LI+ G+ +IP+ Y
Sbjct: 1 FGTVVEILEAFNNLGALGQASFGVIAPIISKALIATAAGILAAIPAYSFYLILKRKVYDL 60
Query: 207 AMQMEGFANEFSA 219
++ ++ + S+
Sbjct: 61 SVYVQMQVDILSS 73
>gi|163750976|ref|ZP_02158208.1| hypothetical protein KT99_07553 [Shewanella benthica KT99]
gi|161329266|gb|EDQ00264.1| hypothetical protein KT99_07553 [Shewanella benthica KT99]
Length = 173
Score = 50.2 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 16/70 (22%), Positives = 30/70 (42%), Gaps = 1/70 (1%)
Query: 138 MSSAGLLVGILGAVLGMMGFFQSIAGYY-SNNVVSIPGIIESLISILLGLCVSIPSSIAY 196
++ L+G+LG V GM+ F + A Y + V GI ++++ GL V + +
Sbjct: 92 LAMVAPLLGLLGTVSGMIAMFDAGANYGFHDPAVISAGISMAMVTTQTGLFVGLSGVLLA 151
Query: 197 NKFIEDSKKF 206
+
Sbjct: 152 FFWQRKLNHV 161
>gi|218438980|ref|YP_002377309.1| MotA/TolQ/ExbB proton channel [Cyanothece sp. PCC 7424]
gi|218171708|gb|ACK70441.1| MotA/TolQ/ExbB proton channel [Cyanothece sp. PCC 7424]
Length = 227
Score = 50.2 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 39/179 (21%), Positives = 69/179 (38%), Gaps = 16/179 (8%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLF--WSGQSLETVCKSLKNHHNIGLA 85
+ L SIL+ S II++ + + + + + ++ ET K +++ L
Sbjct: 14 MWPLLFLSILALSTIIERIWFWSRVLLKQGQVLNRIMDTASRNWETTPKIARDYRRHPLG 73
Query: 86 AIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLV 145
+ + P D ++ A EL + L ++ + L+
Sbjct: 74 NYLYAPLK-------LNNPDP----DVFHLALESAADDELTSMRRGDKVLEAVVALAPLL 122
Query: 146 GILGAVLGMMGFFQSIAGY---YSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIE 201
G+LG VLG++ +I S+ GI ESLIS GL ++I S Y F
Sbjct: 123 GLLGTVLGLITSLSNIQISDLGTSSTAGVTLGISESLISTAAGLILAIASLAFYRVFQA 181
>gi|17228139|ref|NP_484687.1| MotA/TolQ/ExbB proton channel family protein [Nostoc sp. PCC 7120]
gi|17129989|dbj|BAB72601.1| MotA/TolQ/ExbB proton channel family [Nostoc sp. PCC 7120]
Length = 239
Score = 50.2 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 36/199 (18%), Positives = 67/199 (33%), Gaps = 25/199 (12%)
Query: 41 VIIQKSVNFITLRRQFREFEQLFWSG--QSLETVCKSLKNHHNIGLAAIFMSAMS----- 93
VI ++ ++ L Q + + E + + + + +
Sbjct: 27 VIFERLWFWLRLFSQEKAIVDRVLDAAHDNWEIAGDIARQATDQPIGRFLYAPLHLQKTD 86
Query: 94 --EWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAV 151
++ + + A + R +++++ IA S + +G LG
Sbjct: 87 AETFRLALESTAEDELAGMRRGEKLLEAVIALAPLLGLLGTVLGLIQSLRSIRIGDLGT- 145
Query: 152 LGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
+S AG + GI ESLIS GL V+I S + Y F
Sbjct: 146 -------ESAAGVTT-------GIGESLISTAAGLIVAIVSLVFYRLFQSFVVNQLKVFR 191
Query: 212 GFANEFSAILSRQTEGNIS 230
NE +L RQ+ ++S
Sbjct: 192 KAGNE-MELLYRQSPPDLS 209
>gi|332799184|ref|YP_004460683.1| MotA/TolQ/ExbB proton channel [Tepidanaerobacter sp. Re1]
gi|332696919|gb|AEE91376.1| MotA/TolQ/ExbB proton channel [Tepidanaerobacter sp. Re1]
Length = 266
Score = 49.8 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/149 (17%), Positives = 60/149 (40%), Gaps = 7/149 (4%)
Query: 43 IQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKG 102
K + + + R E+ +G + T+ + GL A+ +A KG
Sbjct: 52 FSKFTSLMKIIR-IVFTEKPIDAGDVIRTIIALAETARREGLLALEDAAYQLKDDFMQKG 110
Query: 103 ARSPIGIQDR--IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQS 160
+ D + +M+ +A E +E L +M + G++G ++G++ ++
Sbjct: 111 ILLIVDGTDPELVKNIMETELAFLEERHSEGQGILETMGALAPAFGLIGTIIGLINMLKN 170
Query: 161 IAGYYSNNVVSIPGIIESLISILLGLCVS 189
+ + + PG+ +L++ G V+
Sbjct: 171 L----DSPELIGPGMSVALVTTFYGSLVA 195
>gi|121586379|ref|ZP_01676167.1| TonB system transport protein ExbB1 [Vibrio cholerae 2740-80]
gi|121730191|ref|ZP_01682582.1| TonB system transport protein ExbB1 [Vibrio cholerae V52]
gi|147672293|ref|YP_001215167.1| TonB system transport protein ExbB1 [Vibrio cholerae O395]
gi|153819200|ref|ZP_01971867.1| TonB system transport protein ExbB1 [Vibrio cholerae NCTC 8457]
gi|227812477|ref|YP_002812487.1| TonB system transport protein ExbB1 [Vibrio cholerae M66-2]
gi|229505944|ref|ZP_04395453.1| ferric siderophore transport system biopolymer transport protein
ExbB [Vibrio cholerae BX 330286]
gi|262169177|ref|ZP_06036870.1| ferric siderophore transport system biopolymer transport protein
ExbB [Vibrio cholerae RC27]
gi|298499690|ref|ZP_07009496.1| TonB system transporter ExbB1 [Vibrio cholerae MAK 757]
gi|2738771|gb|AAB94545.1| ExbB [Vibrio cholerae]
gi|121549357|gb|EAX59386.1| TonB system transport protein ExbB1 [Vibrio cholerae 2740-80]
gi|121628066|gb|EAX60610.1| TonB system transport protein ExbB1 [Vibrio cholerae V52]
gi|126510234|gb|EAZ72828.1| TonB system transport protein ExbB1 [Vibrio cholerae NCTC 8457]
gi|146314676|gb|ABQ19216.1| TonB system transport protein ExbB1 [Vibrio cholerae O395]
gi|227011619|gb|ACP07830.1| TonB system transport protein ExbB1 [Vibrio cholerae M66-2]
gi|227015558|gb|ACP11767.1| TonB system transport protein ExbB1 [Vibrio cholerae O395]
gi|229356295|gb|EEO21213.1| ferric siderophore transport system biopolymer transport protein
ExbB [Vibrio cholerae BX 330286]
gi|262022458|gb|EEY41166.1| ferric siderophore transport system biopolymer transport protein
ExbB [Vibrio cholerae RC27]
gi|297541671|gb|EFH77722.1| TonB system transporter ExbB1 [Vibrio cholerae MAK 757]
Length = 228
Score = 49.8 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 30/193 (15%), Positives = 67/193 (34%), Gaps = 22/193 (11%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS------LETVCKSLKNHHN 81
LFI S L+ ++ ++ + + + S L + + +
Sbjct: 15 AWPLFICSALTVMLLAERLFQVLLSLTVGKGAIRHALQATSPKNPKQLAELTEHFASKRP 74
Query: 82 IGLAAIFM-SAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSS 140
+ + M A ++ KS + A + R L L +
Sbjct: 75 VLYRGVAMLLAHHQFDKSLREDAAGIWLQEQRHQF-------------NSGLRLLTLIGV 121
Query: 141 AGLLVGILGAVLGMMGFFQSIAGYYSNNV--VSIPGIIESLISILLGLCVSIPSSIAYNK 198
L+G+LG VLG++ F+ +A + V G+ ++ + GL +++P+
Sbjct: 122 ISPLLGLLGTVLGLIEMFKGVAATTGSITPNVLADGLGVAMYTTAAGLLIAVPAVAGAQL 181
Query: 199 FIEDSKKFAMQME 211
+ + ++E
Sbjct: 182 LNLWADRTMAKLE 194
>gi|153801411|ref|ZP_01955997.1| TonB system transport protein ExbB1 [Vibrio cholerae MZO-3]
gi|229528185|ref|ZP_04417576.1| ferric siderophore transport system biopolymer transport protein
ExbB [Vibrio cholerae 12129(1)]
gi|124123077|gb|EAY41820.1| TonB system transport protein ExbB1 [Vibrio cholerae MZO-3]
gi|229334547|gb|EEO00033.1| ferric siderophore transport system biopolymer transport protein
ExbB [Vibrio cholerae 12129(1)]
gi|327485891|gb|AEA80297.1| Ferric siderophore transport system, biopolymer transport protein
ExbB [Vibrio cholerae LMA3894-4]
Length = 228
Score = 49.8 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 30/190 (15%), Positives = 67/190 (35%), Gaps = 16/190 (8%)
Query: 28 ITLLFIFSILSWSVIIQKSVN----FITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIG 83
LFI S L+ ++ ++ + R Q S ++ + + + ++ +
Sbjct: 15 AWPLFICSALTVMLLAERLFQVLLSLTVGKGAIRHALQA-TSPKNPKQLAELTEHFASKR 73
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
AM DK R + + + L L +
Sbjct: 74 PVLYRGVAMLLAHHQFDKSLREDAAGI---------WLQEQRHQFNSGLRLLTLIGVISP 124
Query: 144 LVGILGAVLGMMGFFQSIAGYYSNNV--VSIPGIIESLISILLGLCVSIPSSIAYNKFIE 201
L+G+LG VLG++ F+ +A + V G+ ++ + GL +++P+
Sbjct: 125 LLGLLGTVLGLIEMFKGVAATTGSITPNVLADGLGVAMYTTAAGLLIAVPAVAGAQLLNL 184
Query: 202 DSKKFAMQME 211
+ + ++E
Sbjct: 185 WADRTMAKLE 194
>gi|153824781|ref|ZP_01977448.1| ExbB [Vibrio cholerae MZO-2]
gi|149741737|gb|EDM55766.1| ExbB [Vibrio cholerae MZO-2]
Length = 228
Score = 49.8 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 30/190 (15%), Positives = 67/190 (35%), Gaps = 16/190 (8%)
Query: 28 ITLLFIFSILSWSVIIQKSVN----FITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIG 83
LFI S L+ ++ ++ + R Q S ++ + + + ++ +
Sbjct: 15 AWPLFICSALTVMLLAERLFQVLLSLTVGKGAIRHALQA-TSPKNPKQLAELTEHFASKR 73
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
AM DK R + + + L L +
Sbjct: 74 PVLYRGVAMLLAHHQFDKSLREDAAGI---------WLQEQRHQFNSGLRLLTLIGVISP 124
Query: 144 LVGILGAVLGMMGFFQSIAGYYSNNV--VSIPGIIESLISILLGLCVSIPSSIAYNKFIE 201
L+G+LG VLG++ F+ +A + V G+ ++ + GL +++P+
Sbjct: 125 LLGLLGTVLGLIEMFKGVAATTGSITPNVLADGLGVAMYTTAAGLLIAVPAVAGAQLLNL 184
Query: 202 DSKKFAMQME 211
+ + ++E
Sbjct: 185 WADRTMAKLE 194
>gi|329904598|ref|ZP_08273886.1| MotA/TolQ/ExbB proton channel family protein [Oxalobacteraceae
bacterium IMCC9480]
gi|327547899|gb|EGF32651.1| MotA/TolQ/ExbB proton channel family protein [Oxalobacteraceae
bacterium IMCC9480]
Length = 146
Score = 49.8 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 18/83 (21%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESLISILLGLC 187
+L L ++ +A L+G+LG +LG++ F+++A ++ ++ GI +L + LG+
Sbjct: 33 QHRLWILDTIVTAAPLLGLLGTILGIIDTFKALAVSGVSDPGAVSQGIGTALYATALGIG 92
Query: 188 VSIPSSIAYNKFIEDSKKFAMQM 210
+++ +N + E ++ +
Sbjct: 93 IAVVGMFFFNLYQERIERINDHL 115
>gi|15601665|ref|NP_233296.1| TonB system transport protein ExbB1 [Vibrio cholerae O1 biovar
eltor str. N16961]
gi|153823477|ref|ZP_01976144.1| TonB system transport protein ExbB1 [Vibrio cholerae B33]
gi|229510202|ref|ZP_04399682.1| ferric siderophore transport system biopolymer transport protein
ExbB [Vibrio cholerae B33]
gi|229517669|ref|ZP_04407114.1| ferric siderophore transport system biopolymer transport protein
ExbB [Vibrio cholerae RC9]
gi|229605476|ref|YP_002876180.1| ferric siderophore transport system biopolymer transport protein
ExbB [Vibrio cholerae MJ-1236]
gi|254284541|ref|ZP_04959508.1| TonB system transport protein ExbB1 [Vibrio cholerae AM-19226]
gi|254850076|ref|ZP_05239426.1| biopolymer transport protein exbB1 [Vibrio cholerae MO10]
gi|255746342|ref|ZP_05420289.1| ferric siderophore transport system biopolymer transport protein
ExbB [Vibrio cholera CIRS 101]
gi|262158303|ref|ZP_06029420.1| ferric siderophore transport system biopolymer transport protein
ExbB [Vibrio cholerae INDRE 91/1]
gi|12644070|sp|O52043|EXBB1_VIBCH RecName: Full=Biopolymer transport protein exbB1
gi|9658347|gb|AAF96808.1| TonB system transport protein ExbB1 [Vibrio cholerae O1 biovar El
Tor str. N16961]
gi|126518991|gb|EAZ76214.1| TonB system transport protein ExbB1 [Vibrio cholerae B33]
gi|150425326|gb|EDN17102.1| TonB system transport protein ExbB1 [Vibrio cholerae AM-19226]
gi|229345705|gb|EEO10678.1| ferric siderophore transport system biopolymer transport protein
ExbB [Vibrio cholerae RC9]
gi|229352647|gb|EEO17587.1| ferric siderophore transport system biopolymer transport protein
ExbB [Vibrio cholerae B33]
gi|229371962|gb|ACQ62384.1| ferric siderophore transport system biopolymer transport protein
ExbB [Vibrio cholerae MJ-1236]
gi|254845781|gb|EET24195.1| biopolymer transport protein exbB1 [Vibrio cholerae MO10]
gi|255736096|gb|EET91494.1| ferric siderophore transport system biopolymer transport protein
ExbB [Vibrio cholera CIRS 101]
gi|262029985|gb|EEY48632.1| ferric siderophore transport system biopolymer transport protein
ExbB [Vibrio cholerae INDRE 91/1]
Length = 228
Score = 49.4 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 30/190 (15%), Positives = 67/190 (35%), Gaps = 16/190 (8%)
Query: 28 ITLLFIFSILSWSVIIQKSVN----FITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIG 83
LFI S L+ ++ ++ + R Q S ++ + + + ++ +
Sbjct: 15 AWPLFICSALTVMLLAERLFQVLLSLTVGKGAIRHALQA-TSPKNPKQLAELTEHFASKR 73
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
AM DK R + + + L L +
Sbjct: 74 PVLYRGVAMLLAHHQFDKSLREDAAGI---------WLQEQRHQFNSGLRLLTLIGVISP 124
Query: 144 LVGILGAVLGMMGFFQSIAGYYSNNV--VSIPGIIESLISILLGLCVSIPSSIAYNKFIE 201
L+G+LG VLG++ F+ +A + V G+ ++ + GL +++P+
Sbjct: 125 LLGLLGTVLGLIEMFKGVAATTGSITPNVLADGLGVAMYTTAAGLLIAVPAVAGAQLLSL 184
Query: 202 DSKKFAMQME 211
+ + ++E
Sbjct: 185 WADRTMAKLE 194
>gi|160901601|ref|YP_001567182.1| MotA/TolQ/ExbB proton channel [Petrotoga mobilis SJ95]
gi|160359245|gb|ABX30859.1| MotA/TolQ/ExbB proton channel [Petrotoga mobilis SJ95]
Length = 259
Score = 49.4 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 28/159 (17%), Positives = 65/159 (40%), Gaps = 6/159 (3%)
Query: 67 QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
++L + + + I L S S++ + + A ++ I ++++V + E
Sbjct: 76 RTLYSFSEKARRDGMISLEEDIPSVKSDFLRDGLRAAVDGTDPEE-IKKILEVKMDMYQE 134
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLG- 185
+K+S L + + G++G ++G++ ++ S+ P + +LI+ L G
Sbjct: 135 TEEDKISVLDTWGAMAPAWGMVGTLIGLVLLLDTL----SDPTTIGPRMSLALITTLYGA 190
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
L I + K + K QM +I+ +
Sbjct: 191 LIAYIFALPPAEKLKKRVDKNINQMRMMLEGILSIVQGE 229
>gi|218248020|ref|YP_002373391.1| MotA/TolQ/ExbB proton channel [Cyanothece sp. PCC 8801]
gi|218168498|gb|ACK67235.1| MotA/TolQ/ExbB proton channel [Cyanothece sp. PCC 8801]
Length = 221
Score = 49.4 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 37/166 (22%), Positives = 65/166 (39%), Gaps = 18/166 (10%)
Query: 42 IIQKSVNFITLRRQFREFEQLF--WSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSC 99
II++ + + + + ++ + V K + H + L +
Sbjct: 22 IIERFWFWGRFLLKQGQILNRIMDTAARNWDLVAKVAREHRDHPLGNYLYA--------- 72
Query: 100 DKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQ 159
R + ++ A EL + + L ++ + L+G+LG VLG++G
Sbjct: 73 --PLRLADPDPEVFHLALESAADDELALMRKGDKILEAIIALSPLLGLLGTVLGLIGSLS 130
Query: 160 SIA----GYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIE 201
SI G S V++ GI E+LIS GL V+I S Y F
Sbjct: 131 SIQISDLGTESTAGVTL-GISEALISTAAGLIVAIVSLAFYRIFQS 175
>gi|261212956|ref|ZP_05927240.1| ferric siderophore transport system biopolymer transport protein
ExbB [Vibrio sp. RC341]
gi|260838021|gb|EEX64698.1| ferric siderophore transport system biopolymer transport protein
ExbB [Vibrio sp. RC341]
Length = 229
Score = 49.4 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 31/193 (16%), Positives = 66/193 (34%), Gaps = 22/193 (11%)
Query: 28 ITLLFIFSILSWSVIIQKSVN----FITLRRQFREFEQLFWSGQS--LETVCKSLKNHHN 81
LFI S L+ ++ ++ + R+ L + K
Sbjct: 15 AWPLFICSALTVMLLAERLFQVLLSLTVGKGAIRQALDAVSPNNPTQLAELTKHFTGKRP 74
Query: 82 IGLAAIFM-SAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSS 140
+ + M A +++KS + A + R L L +
Sbjct: 75 VLYRGVAMLLAHHQFEKSLREDAAGIWLQEQRHQF-------------NSGLRLLTLIGV 121
Query: 141 AGLLVGILGAVLGMMGFFQSIAGYYSNNV--VSIPGIIESLISILLGLCVSIPSSIAYNK 198
L+G+LG VLG++ F+ +A + V G+ ++ + GL +++P+
Sbjct: 122 ISPLLGLLGTVLGLIDMFKGVAATTGSITPNVLADGLGIAMYTTAAGLMIAVPAVAGAQL 181
Query: 199 FIEDSKKFAMQME 211
+ + ++E
Sbjct: 182 LNLWADRTMAKLE 194
>gi|323698830|ref|ZP_08110742.1| MotA/TolQ/ExbB proton channel [Desulfovibrio sp. ND132]
gi|323458762|gb|EGB14627.1| MotA/TolQ/ExbB proton channel [Desulfovibrio desulfuricans ND132]
Length = 181
Score = 49.4 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 36/205 (17%), Positives = 66/205 (32%), Gaps = 41/205 (20%)
Query: 17 FMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSL 76
F+ G + L + + W +I++ ++ + E LE L
Sbjct: 11 FVHAGG---ATMAPLLLCCLAMWYLILRAWLDLLPASAGGLRAE--------LEQTFARL 59
Query: 77 KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLG 136
G A + + G++ R R + +A L
Sbjct: 60 CPGPGPGDADLADALAE--------------GVRARTRRRLSLAAVFAAAAPLLGLL--- 102
Query: 137 SMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIA 195
G V GM+ F +A + S + V GI +++IS GL V++P IA
Sbjct: 103 ------------GTVTGMIETFDGVARFGSASPQVLSSGISQAMISTQTGLVVAVPGLIA 150
Query: 196 YNKFIEDSKKFAMQMEGFANEFSAI 220
+ + ++ E A+
Sbjct: 151 VYFLRRRALRLHIRPERARPAVHAV 175
>gi|269961384|ref|ZP_06175749.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|269833935|gb|EEZ88029.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
Length = 81
Score = 49.0 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 16/74 (21%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Query: 140 SAGLLVGILGAVLGMMGFFQSIAGYYSNN-VVSIPGIIESLISILLGLCVSIPSSIAYNK 198
+ ++G+LG V GM+ F +A S+N + GI + + + G+ ++ + +
Sbjct: 2 AICPMLGLLGTVTGMITVFDVMATQGSSNPKLMASGISLATLPTMAGMVAALAGMFVHAR 61
Query: 199 FIEDSKKFAMQMEG 212
+ ++ A+Q+E
Sbjct: 62 LSKVCERKALQLEQ 75
>gi|192360920|ref|YP_001981091.1| TonB system transport protein ExbB2 [Cellvibrio japonicus Ueda107]
gi|190687085|gb|ACE84763.1| TonB system transport protein ExbB2 [Cellvibrio japonicus Ueda107]
Length = 170
Score = 49.0 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 17/117 (14%), Positives = 48/117 (41%), Gaps = 2/117 (1%)
Query: 88 FMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE-EITEKLSFLGSMSSAGLLVG 146
F+ ++ + + + + EL+ ++++++ + ++ + ++G
Sbjct: 39 FLREYPALRQQRRDAWNARVDKSSWVAEQQRKQLLSELDCMMSQRMTLIPALIALLPMLG 98
Query: 147 ILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNKFIED 202
+LG V GM+ F+ +A S N G+ + I + G+ +S+ +
Sbjct: 99 LLGTVTGMIQVFEVMAYLGSGNPRAMANGVSAATIPTMAGMVISLLGIPFATELKRR 155
>gi|153828059|ref|ZP_01980726.1| TonB system transport protein ExbB1 [Vibrio cholerae 623-39]
gi|148876468|gb|EDL74603.1| TonB system transport protein ExbB1 [Vibrio cholerae 623-39]
Length = 228
Score = 49.0 bits (116), Expect = 6e-04, Method: Composition-based stats.
Identities = 30/193 (15%), Positives = 67/193 (34%), Gaps = 22/193 (11%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS------LETVCKSLKNHHN 81
LFI S L+ ++ ++ + + + S L + + +
Sbjct: 15 AWPLFICSALTVMLLAERLFQVLLSLTVGKGAIRHALQATSPKNPKQLAELTEHFASKRP 74
Query: 82 IGLAAIFM-SAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSS 140
+ + M A ++ KS + A + R L L +
Sbjct: 75 VLYRGVAMLLAHHQFDKSLREDAAGIWLQEQRHQF-------------NSGLRLLTLIGV 121
Query: 141 AGLLVGILGAVLGMMGFFQSIAGYYSNNV--VSIPGIIESLISILLGLCVSIPSSIAYNK 198
L+G+LG VLG++ F+ +A + V G+ ++ + GL +++P+
Sbjct: 122 ISPLLGLLGTVLGLIEMFKGVAVTTGSITPNVLADGLGVAMYTTAAGLLIAVPAVAGAQL 181
Query: 199 FIEDSKKFAMQME 211
+ + ++E
Sbjct: 182 LNLWADRTMAKLE 194
>gi|298491446|ref|YP_003721623.1| MotA/TolQ/ExbB proton channel ['Nostoc azollae' 0708]
gi|298233364|gb|ADI64500.1| MotA/TolQ/ExbB proton channel ['Nostoc azollae' 0708]
Length = 262
Score = 48.6 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 44/230 (19%), Positives = 75/230 (32%), Gaps = 41/230 (17%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSW----------SVIIQKSVNFITLRRQFREFE 60
+ I LF + G W SVI ++ ++ + Q +E
Sbjct: 1 MDILDLFHKGGP--------------AMWPLLVLSVLSLSVIFERLWFWLRILMQEKEIV 46
Query: 61 QLFWSGQS--LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMD 118
+ + E + + + + + R + ++
Sbjct: 47 ERVLDAATENWEIATEIAQKAVDQPIGRFLYA-----------PLRLQKSDAETFRLALE 95
Query: 119 VAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI---AGYYSNNVVSIPGI 175
A EL + L S+ + L+G+LG VLG++ +SI + GI
Sbjct: 96 STAAEELAGMRRGEKLLESVIALSPLLGLLGTVLGLIQSLRSIRIGDLGNESTAGVTTGI 155
Query: 176 IESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
ESLIS GL V+I S Y F N+ +L RQ+
Sbjct: 156 GESLISTAAGLIVAIASLAFYRLFQGFVVNQFKVFNKAGNDL-ELLYRQS 204
>gi|257060656|ref|YP_003138544.1| MotA/TolQ/ExbB proton channel [Cyanothece sp. PCC 8802]
gi|256590822|gb|ACV01709.1| MotA/TolQ/ExbB proton channel [Cyanothece sp. PCC 8802]
Length = 227
Score = 48.6 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 37/166 (22%), Positives = 65/166 (39%), Gaps = 18/166 (10%)
Query: 42 IIQKSVNFITLRRQFREFEQLF--WSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSC 99
II++ + + + + ++ + V K + H + L +
Sbjct: 28 IIERFWFWGRFLLKQGQILNRIMDTAARNWDLVAKVAREHRDHPLGNYLYA--------- 78
Query: 100 DKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQ 159
R + ++ A EL + + L ++ + L+G+LG VLG++G
Sbjct: 79 --PLRLADPDPEVFHLALESAADDELALMRKGDKILEAIIALSPLLGLLGTVLGLIGSLS 136
Query: 160 SIA----GYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIE 201
SI G S V++ GI E+LIS GL V+I S Y F
Sbjct: 137 SIQISDLGTESTAGVTL-GISEALISTAAGLIVAIVSLAFYRIFQS 181
>gi|254445167|ref|ZP_05058643.1| transporter, MotA/TolQ/ExbB proton channel family, putative
[Verrucomicrobiae bacterium DG1235]
gi|198259475|gb|EDY83783.1| transporter, MotA/TolQ/ExbB proton channel family, putative
[Verrucomicrobiae bacterium DG1235]
Length = 174
Score = 48.6 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 25/132 (18%), Positives = 52/132 (39%), Gaps = 6/132 (4%)
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQD---RIDRMMDVAIARELEEI-TEKLSFLGSMS 139
L +F K D R QD + A+ + + T+++ + ++
Sbjct: 35 LERLFFFLFR-MKDLHDSTLRDWEARQDKSSWKAHKVRDAMVVTMRLLATKRIGLIRTLV 93
Query: 140 SAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIAYNK 198
+ L+GILG V GM+ F I + N GI ++ + + GL S+ + +
Sbjct: 94 AICPLLGILGTVAGMIFVFDVITITGTGNARGMAAGITKATLPTMAGLVASLSGLLCAVR 153
Query: 199 FIEDSKKFAMQM 210
+++ ++
Sbjct: 154 LERAAQRAEEKL 165
>gi|167625523|ref|YP_001675817.1| MotA/TolQ/ExbB proton channel [Shewanella halifaxensis HAW-EB4]
gi|167355545|gb|ABZ78158.1| MotA/TolQ/ExbB proton channel [Shewanella halifaxensis HAW-EB4]
Length = 172
Score = 48.6 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 17/96 (17%), Positives = 40/96 (41%), Gaps = 5/96 (5%)
Query: 116 MMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYY-SNNVVSIPG 174
+ A++ ++ + ++ L+G+LG V GM+ F + A Y + V G
Sbjct: 74 ALRQIQAQQYADLQG----VKLLAMVAPLLGLLGTVSGMIAMFDAGASYGFHDPAVISAG 129
Query: 175 IIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQM 210
I ++++ GL V + ++ + + +
Sbjct: 130 ISMAMVTTQTGLFVGLSGALLAFFWQRKLNRVDTNL 165
>gi|307545629|ref|YP_003898108.1| TonB system transporter ExbB2 [Halomonas elongata DSM 2581]
gi|307217653|emb|CBV42923.1| TonB system transport protein ExbB2 [Halomonas elongata DSM 2581]
Length = 178
Score = 48.6 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 20/108 (18%), Positives = 42/108 (38%), Gaps = 5/108 (4%)
Query: 121 IARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESL 179
+ + + L +L + L+G+LG V GM+ F S++ N G+ +
Sbjct: 75 VRELIASLRGPLPWLKLLVVICPLLGLLGTVTGMITVFDSLSISEVNQARAMADGVARAT 134
Query: 180 ISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEG 227
+ L G+ VS+ + FI + + + ++ A +
Sbjct: 135 LPTLSGMAVSVVGLL----FITRLEHIIRREDQRLHDRLARAAEDAHA 178
>gi|323144384|ref|ZP_08078992.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Succinatimonas hippei YIT 12066]
gi|322415837|gb|EFY06563.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Succinatimonas hippei YIT 12066]
Length = 172
Score = 48.6 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 29/107 (27%), Positives = 58/107 (54%), Gaps = 9/107 (8%)
Query: 121 IARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA-GYYSNNVVSIPGIIESL 179
+ +++ + L FL ++ G L+G+LG VLGM+ F ++A N+ + GI ++L
Sbjct: 70 MQTKMKGLFSSLYFLKLCAAVGPLLGLLGTVLGMIEVFSTLADNSTHNSALLASGIWQAL 129
Query: 180 ISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
I+ ++GL ++IP+ + + + + + + +LSRQTE
Sbjct: 130 ITTVMGLTLAIPALMVHYYILTNLRYIKTTI--------TLLSRQTE 168
>gi|295111631|emb|CBL28381.1| Biopolymer transport proteins [Synergistetes bacterium SGP1]
Length = 207
Score = 48.6 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 36/202 (17%), Positives = 74/202 (36%), Gaps = 38/202 (18%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG---QSLETVCKSLKNHHNI 82
I+ ++ + S ++ +V++++ F R E L+T +L N
Sbjct: 10 GIMWIIALLSFVALAVVLERLFFFTRSRTDPGRLEVGLGRALRDGDLQTAL-ALAEAGNS 68
Query: 83 GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAG 142
L +F + S W+ + + + + I REL L L +
Sbjct: 69 SLHRLFAAVFSCWELP-----------DETVRLLAERRIRRELYRWERHLPVLEVTARVA 117
Query: 143 LLVGILGAVLGMMGFFQSIAGYYSNNVVSI------------PGIIESLISILLGLCVSI 190
L+G+LG VLGM+ F+S+ + + +++ G++ +I
Sbjct: 118 PLLGLLGTVLGMVEMFRSLHQGGAVDAIAVTGGIWKALFTTVAGLV-----------AAI 166
Query: 191 PSSIAYNKFIEDSKKFAMQMEG 212
P +A++ A +E
Sbjct: 167 PMVLAHSLLQGAVDSQAETLER 188
>gi|188590744|ref|YP_001920213.1| chemotaxis protein MotA [Clostridium botulinum E3 str. Alaska E43]
gi|251778037|ref|ZP_04820957.1| chemotaxis protein MotA [Clostridium botulinum E1 str. 'BoNT E
Beluga']
gi|188501025|gb|ACD54161.1| chemotaxis protein MotA [Clostridium botulinum E3 str. Alaska E43]
gi|243082352|gb|EES48242.1| chemotaxis protein MotA [Clostridium botulinum E1 str. 'BoNT E
Beluga']
Length = 267
Score = 47.9 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 27/168 (16%), Positives = 65/168 (38%), Gaps = 15/168 (8%)
Query: 52 LRRQFREFEQLFWSGQS--------LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGA 103
+++ + F + F +S + + + + L E+ K +
Sbjct: 58 VKKAGKLFMESFKEPKSSTMETIAQFTELSRKARRDGLLSLEDTISQLEDEFLKKGLQMV 117
Query: 104 RSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAG 163
I + I ++++ I+ + + G+LG ++G++ Q+++
Sbjct: 118 VDGIE-PESIKEILELDISEMEVRHKSGAGIFSTWGAFAPGFGMLGTLIGLIQMLQNLSD 176
Query: 164 YYSNNVVSIPGIIESLISILLG-LCVSIPSS-IAYNKFIEDSKKFAMQ 209
+ G+ ++LI+ G L +I +S IA N + K+ AM+
Sbjct: 177 VSTI----ATGMGKALITTFYGSLIANILASPIAQNLLAKSQKEVAMK 220
>gi|182418467|ref|ZP_02949761.1| chemotaxis protein MotA [Clostridium butyricum 5521]
gi|237666315|ref|ZP_04526300.1| chemotaxis protein MotA [Clostridium butyricum E4 str. BoNT E
BL5262]
gi|182377849|gb|EDT75393.1| chemotaxis protein MotA [Clostridium butyricum 5521]
gi|237657514|gb|EEP55069.1| chemotaxis protein MotA [Clostridium butyricum E4 str. BoNT E
BL5262]
Length = 272
Score = 47.9 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 34/196 (17%), Positives = 71/196 (36%), Gaps = 20/196 (10%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
M YG+A +S LF I L I++ ++ F
Sbjct: 18 MMFYGMASGGLSEMHLFWDAPSVAITIGGSLAAVMIVT---------PMSEFKKIGTLFV 68
Query: 61 QLFW--SGQSLETVCK---SLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQD--RI 113
Q F S S+ET+ K + GL ++ + + K KG + + + I
Sbjct: 69 QAFKEPSSSSIETIAKFSELSRKARKEGLLSLEDAINNLDDKFLKKGLQMVVDGIEPESI 128
Query: 114 DRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP 173
++++ I S + + G+LG ++G++ +++ +
Sbjct: 129 KEILELEILGMETRHGNGASIFKTWGAFAPGFGMLGTLIGLIQMLGNLSDASTI----AS 184
Query: 174 GIIESLISILLGLCVS 189
G+ ++LI+ G ++
Sbjct: 185 GMGKALITTYYGSLLA 200
>gi|237800629|ref|ZP_04589090.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. oryzae str.
1_6]
gi|331023488|gb|EGI03545.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. oryzae str.
1_6]
Length = 149
Score = 47.9 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 30/157 (19%), Positives = 61/157 (38%), Gaps = 17/157 (10%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
++ L G + + + SI + +II++ R W + +
Sbjct: 1 MWELVKSGGWM----MLPIILSSIAAVGIIIERLWTLRASRIAPPHLLGQAWQWIQEKKL 56
Query: 73 -CKSLKN-HHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
+ LK + L I + ++ + + + ++ A AR + ++
Sbjct: 57 DNEKLKQLRADSPLGEILAAGLTNSRHGR-----------EIMKECIEEAAARVIHDLER 105
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSN 167
LS LGS+++ L+G+LG VLGM+ F S +
Sbjct: 106 YLSALGSIAAMAPLLGLLGTVLGMIDIFGSFNSTGAT 142
>gi|149377859|ref|ZP_01895589.1| MotA/TolQ/ExbB proton channel [Marinobacter algicola DG893]
gi|149357861|gb|EDM46353.1| MotA/TolQ/ExbB proton channel [Marinobacter algicola DG893]
Length = 266
Score = 47.9 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 35/188 (18%), Positives = 67/188 (35%), Gaps = 25/188 (13%)
Query: 20 MGLAVKC------IITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVC 73
G + ++ +L ++ + V F+ L F F S L+
Sbjct: 14 AGPVSQLLEMGGPVMIVLL-------AIALAGVVTFLYLMLFGTFFAPRFTSK--LKKAI 64
Query: 74 KSLKNHHNIGLAAIFMSAMSEWKKSCDKG--------ARSPIGIQDRIDRMMDVAIAREL 125
+ + ++ + + + AR+ +I + L
Sbjct: 65 TEWQQKPDGNVSEHLQRSAGRYAQLNPLHHLIVNTMNARNAGTDPQQIRESVARDAHEAL 124
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYY--SNNVVSIPGIIESLISIL 183
E L + +++ L+G+LG VLGMM F ++A +N GI E+L +
Sbjct: 125 EPFEAPLKIIEVIAALAPLLGLLGTVLGMMEAFGAMAATEGRANASQLSGGIYEALTTTA 184
Query: 184 LGLCVSIP 191
GL ++IP
Sbjct: 185 AGLVIAIP 192
>gi|300867396|ref|ZP_07112051.1| MotA/TolQ/ExbB proton channel [Oscillatoria sp. PCC 6506]
gi|300334586|emb|CBN57219.1| MotA/TolQ/ExbB proton channel [Oscillatoria sp. PCC 6506]
Length = 261
Score = 47.5 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 38/189 (20%), Positives = 70/189 (37%), Gaps = 19/189 (10%)
Query: 42 IIQKSVNFITLRRQFREFEQLFWSG--QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSC 99
II++ + L + ++ + + K H + + + +
Sbjct: 28 IIERLWFWANLISKEKQIVNRVLEAARRDWAAANEIAKQAHQQPIGRFLYAPLRLY---- 83
Query: 100 DKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQ 159
+P R+ ++ A EL + L ++ + L+G+LG VLG++
Sbjct: 84 -----NPEPEVFRLG--LEAAADEELASMRRGDKILEAVIALAPLLGLLGTVLGLINSLS 136
Query: 160 SI----AGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFAN 215
+I G + V++ GI E+LIS G+ V+I S Y F N
Sbjct: 137 TIRLGDIGTSATAGVTL-GISEALISTATGMVVAIISLTFYRIFQAFLFNQVKVFRKAGN 195
Query: 216 EFSAILSRQ 224
E +L RQ
Sbjct: 196 EL-ELLYRQ 203
>gi|298530632|ref|ZP_07018034.1| MotA/TolQ/ExbB proton channel [Desulfonatronospira thiodismutans
ASO3-1]
gi|298510006|gb|EFI33910.1| MotA/TolQ/ExbB proton channel [Desulfonatronospira thiodismutans
ASO3-1]
Length = 253
Score = 47.5 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 14/77 (18%), Positives = 35/77 (45%), Gaps = 4/77 (5%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI 172
I +M+ I+ + LG+M + +G++G ++G++ Q + +
Sbjct: 123 IQEIMETEISHIEDRHQTGADILGAMGAFAPAMGMIGTIIGLVLMLQDL----DDPAAIG 178
Query: 173 PGIIESLISILLGLCVS 189
P + +LI+ G+ ++
Sbjct: 179 PAMAIALITTFYGVILA 195
>gi|330905252|gb|EGH35824.1| biopolymer transport protein ExbB [Pseudomonas syringae pv.
japonica str. M301072PT]
Length = 39
Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 12/39 (30%), Positives = 19/39 (48%)
Query: 136 GSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG 174
S+ S +G+ G V G+M QSI S + ++ G
Sbjct: 1 ASIGSTAPFIGLFGTVWGIMEALQSIGVTGSASREAVAG 39
>gi|284050131|ref|ZP_06380341.1| MotA/TolQ/ExbB proton channel [Arthrospira platensis str. Paraca]
Length = 194
Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 31/94 (32%), Positives = 44/94 (46%), Gaps = 6/94 (6%)
Query: 135 LGSMSSAGLLVGILGAVLGMMGFFQSI----AGYYSNNVVSIPGIIESLISILLGLCVSI 190
L ++ + ++G+LG VLG++ SI G S V++ GI E+LIS GL V+I
Sbjct: 1 LEAVIALAPMLGLLGTVLGLINSLGSIRLGDIGTSSAADVTL-GIGEALISTATGLIVAI 59
Query: 191 PSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
S Y F S NE +L RQ
Sbjct: 60 ISLAFYRLFQGFSFSQVKVFRKAGNEL-ELLYRQ 92
>gi|258627644|ref|ZP_05722420.1| TonB system transport protein ExbB1 [Vibrio mimicus VM603]
gi|262173430|ref|ZP_06041107.1| ferric siderophore transport system biopolymer transport protein
ExbB [Vibrio mimicus MB-451]
gi|258580087|gb|EEW05060.1| TonB system transport protein ExbB1 [Vibrio mimicus VM603]
gi|261890788|gb|EEY36775.1| ferric siderophore transport system biopolymer transport protein
ExbB [Vibrio mimicus MB-451]
Length = 228
Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 24/186 (12%), Positives = 61/186 (32%), Gaps = 8/186 (4%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAI 87
LFI S L+ ++ ++ + + + S + + +
Sbjct: 15 AWPLFICSALTVMLLAERLFQVLLSLTVGKGAIRHALRAASPNNTTQLAELTEHFSSKRP 74
Query: 88 FMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGI 147
+ + +D + + + L L + L+G+
Sbjct: 75 VL--YRGVAMLLAHHQFDKVLREDAAGIWLQEQRHQF----SSGLRLLTLIGVISPLLGL 128
Query: 148 LGAVLGMMGFFQSIAGYYSNNV--VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKK 205
LG VLG++ F+ +A + V G+ ++ + GL +++P+ + +
Sbjct: 129 LGTVLGLIEMFKGVAATTGSITPNVLADGLGIAMYTTAAGLMIALPAVAGAQLLNLWADR 188
Query: 206 FAMQME 211
++E
Sbjct: 189 TMAKLE 194
>gi|257095367|ref|YP_003169008.1| flagellar motor protein [Candidatus Accumulibacter phosphatis clade
IIA str. UW-1]
gi|257047891|gb|ACV37079.1| MotA/TolQ/ExbB proton channel [Candidatus Accumulibacter phosphatis
clade IIA str. UW-1]
Length = 241
Score = 46.7 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 25/139 (17%), Positives = 54/139 (38%), Gaps = 6/139 (4%)
Query: 83 GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAG 142
L AI E+ + +R+ +++V I+ EE+ +
Sbjct: 90 ALDAIVNELKDEFIR-KGLQLLVDGAEPERLREVLEVEISTFEEEMKLSARIWEAAGGYS 148
Query: 143 LLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSI-AYNKFIE 201
+GILGAV+G++ +++ S+ GI + ++ + G+ ++ + NK
Sbjct: 149 PTIGILGAVMGLIHVMENL----SDPSKLGAGIAVAFVATIYGVGLANLVYLPMANKLKT 204
Query: 202 DSKKFAMQMEGFANEFSAI 220
+ +Q E + I
Sbjct: 205 HINRLVVQREMIVDGLVGI 223
>gi|310644266|ref|YP_003949025.1| mota/tolq/exbb proton channel [Paenibacillus polymyxa SC2]
gi|309249217|gb|ADO58784.1| MotA/TolQ/ExbB proton channel [Paenibacillus polymyxa SC2]
Length = 275
Score = 46.7 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 17/123 (13%), Positives = 47/123 (38%), Gaps = 5/123 (4%)
Query: 67 QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
+ L ++ + + + L I + + + + Q++I +++++ +
Sbjct: 79 EDLVSMAATSRRSGVLALERISSEHPNAFLREGLQLVIDGTE-QEQIKQILELELDAIEH 137
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGL 186
+ S +GI+G V+G++ S+ + P I + I+ L G+
Sbjct: 138 KHEGYAKIFESAGGYAPTMGIIGTVMGLIHVLGSL----TEPTALGPSIAVAFIATLYGV 193
Query: 187 CVS 189
+
Sbjct: 194 ASA 196
>gi|258622565|ref|ZP_05717587.1| TonB system transport protein ExbB1 [Vibrio mimicus VM573]
gi|258585265|gb|EEW09992.1| TonB system transport protein ExbB1 [Vibrio mimicus VM573]
Length = 228
Score = 46.7 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 24/186 (12%), Positives = 61/186 (32%), Gaps = 8/186 (4%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAI 87
LFI S L+ ++ ++ + + + S + + +
Sbjct: 15 AWPLFICSALTVMLLAERLFQVLLSLTVGKGAIRHALRAASPNNTTQLAELTEHFSSKRP 74
Query: 88 FMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGI 147
+ + +D + + + L L + L+G+
Sbjct: 75 VL--YRGVAMLLAHHQFDKVLREDAAGIWLQEQRHQF----SSGLRLLTLIGVISPLLGL 128
Query: 148 LGAVLGMMGFFQSIAGYYSNNV--VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKK 205
LG VLG++ F+ +A + V G+ ++ + GL +++P+ + +
Sbjct: 129 LGTVLGLIEMFKGVAATTGSITPNVLADGLGIAMYTTAAGLMIALPAVAGAQLLNLWADR 188
Query: 206 FAMQME 211
++E
Sbjct: 189 TMAKLE 194
>gi|53802327|ref|YP_112967.1| MotA/TolQ/ExbB proton channel family protein [Methylococcus
capsulatus str. Bath]
gi|53756088|gb|AAU90379.1| MotA/TolQ/ExbB proton channel family domain protein [Methylococcus
capsulatus str. Bath]
Length = 165
Score = 46.7 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 18/82 (21%), Positives = 36/82 (43%), Gaps = 1/82 (1%)
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCV 188
L + ++S ++G+LG V G++ F I + S + G+ ++LI+ L GL +
Sbjct: 78 RHLRLIRTLSGILPMLGLLGTVTGIVETFDLIRVFGSAETRIVARGVSQALITTLTGLVM 137
Query: 189 SIPSSIAYNKFIEDSKKFAMQM 210
+ A ++ M
Sbjct: 138 GLSGVGAGYDLSRRAEAGERAM 159
>gi|90578828|ref|ZP_01234638.1| putative ExbB-like protein [Vibrio angustum S14]
gi|90439661|gb|EAS64842.1| putative ExbB-like protein [Vibrio angustum S14]
Length = 233
Score = 46.7 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 30/193 (15%), Positives = 68/193 (35%), Gaps = 22/193 (11%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFI------TLRRQFREFEQLFWSGQSLETVCKSLKNHHN 81
L I S+L+ ++ ++ + + + +Q +L+ + + LK
Sbjct: 15 AWPLIICSVLTVMILTERLIQVLLCTGVGKTKVTALLAQQNRHDEHALDNLTEELKQQRP 74
Query: 82 IGLAAIFM-SAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSS 140
+ I M A + K + A + IQ R + + + +
Sbjct: 75 LLYKGIAMLIAHRHFTKPLREDAAAIWLIQKRTELRSGLRLLSL-------------IGV 121
Query: 141 AGLLVGILGAVLGMMGFFQSIAGYYS--NNVVSIPGIIESLISILLGLCVSIPSSIAYNK 198
L+G+LG VLG++ F I+ G+ ++ + GL +++P+
Sbjct: 122 ISPLLGLLGTVLGLIDMFTGISHSTGSVTPSDLADGLGLAMRTTAAGLIIALPAITGAQL 181
Query: 199 FIEDSKKFAMQME 211
+ ++E
Sbjct: 182 LGLWADNVTAKLE 194
>gi|186685253|ref|YP_001868449.1| MotA/TolQ/ExbB proton channel [Nostoc punctiforme PCC 73102]
gi|186467705|gb|ACC83506.1| MotA/TolQ/ExbB proton channel [Nostoc punctiforme PCC 73102]
Length = 242
Score = 46.7 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 32/192 (16%), Positives = 62/192 (32%), Gaps = 25/192 (13%)
Query: 43 IQKSVNFITLRRQFREFEQLFWSG--QSLETVCKSLKNHHNIGLAAIFMSAMS------- 93
++ ++ + Q ++ + + K + + + +
Sbjct: 29 FERLWFWLRILTQEKQIVDRILDAAQDNWQAAADIAKQASHQPVGRFLYAPLRFAKTDVE 88
Query: 94 EWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLG 153
++ + + A + R +++++ IA S + +G LG
Sbjct: 89 TFRLALEATAEDELAGMRRGEKLLEAVIALAPLLGLLGTVLGLIQSLRSIRIGDLGT--- 145
Query: 154 MMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGF 213
+S AG + GI ESLIS GL V+I S Y F
Sbjct: 146 -----ESTAGVTT-------GIGESLISTATGLIVAIISLAFYRLFQSFVVNQVKVFRKA 193
Query: 214 ANEFSAILSRQT 225
NE +L RQ+
Sbjct: 194 GNE-MELLYRQS 204
>gi|24375169|ref|NP_719212.1| TonB system transport protein ExbB1 [Shewanella oneidensis MR-1]
gi|24349949|gb|AAN56656.1|AE015802_2 TonB system transport protein ExbB1 [Shewanella oneidensis MR-1]
Length = 260
Score = 46.7 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 29/180 (16%), Positives = 69/180 (38%), Gaps = 17/180 (9%)
Query: 29 TLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIF 88
L I + L+ + +++S F+ ++ W K L++ +
Sbjct: 29 WPLLICAFLALMICLERSALFLQQSAASISPKKQAW--------VKELRHSDAKPTSENI 80
Query: 89 MSAMSEWKKSCDKGARSPIGIQDRI-------DRMMDVAIARELEEITEKLSFLGSMSSA 141
+ +S+ D AR + + + ++ + + ++ E+ L L +
Sbjct: 81 QALLSKTSHQQDLLARGATLLLAQAHQPKPLREELLSLWLNKQQRELQAGLKILQVIGII 140
Query: 142 GLLVGILGAVLGMMGFFQSIAGYYS--NNVVSIPGIIESLISILLGLCVSIPSSIAYNKF 199
L+G+LG VLG++ F + G+ ++ + GL +++P+ A + F
Sbjct: 141 SPLLGLLGTVLGLIDMFAQLGQSQGPVTPAQLSAGLGLAMNTTAAGLIIAVPTITAAHLF 200
>gi|116754461|ref|YP_843579.1| integral membrane protein [Methanosaeta thermophila PT]
gi|116665912|gb|ABK14939.1| outer membrane transport energization protein ExbB [Methanosaeta
thermophila PT]
Length = 214
Score = 46.3 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 34/209 (16%), Positives = 77/209 (36%), Gaps = 25/209 (11%)
Query: 28 ITLLFIFSILSWSVIIQKSV--NFITLRRQFREFEQLFWSGQSLE------TVCKSLKNH 79
+ L + + WS+I+ SV + + RR E E++ SL + L +
Sbjct: 22 MICLLV--LFGWSLILVGSVIQEYTSRRRDVHELEEVTLRAASLASSGREKEAAEVLSGY 79
Query: 80 HNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMS 139
+ LA + + E S + ++ R+++++ A + L
Sbjct: 80 RSPQLAGV----LGEIAASLESNI-----LRVRLEKILQDAELDMARRLE----PLRIGM 126
Query: 140 SAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKF 199
G ++G++G ++ M S++ ++ II + + ++GL V +
Sbjct: 127 RVGPILGLMGTLIPMGPALVSLS-RGDVQSMAASLII-AFATTVIGLVVGGICYCSLLIR 184
Query: 200 IEDSKKFAMQMEGFANEFSAILSRQTEGN 228
+ +E A L + +G+
Sbjct: 185 NRWYHQDLSDLEYSAAILRRALDERPDGH 213
>gi|218133671|ref|ZP_03462475.1| hypothetical protein BACPEC_01540 [Bacteroides pectinophilus ATCC
43243]
gi|217991046|gb|EEC57052.1| hypothetical protein BACPEC_01540 [Bacteroides pectinophilus ATCC
43243]
Length = 269
Score = 46.3 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 12/79 (15%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ + +++ + E + F +++S G G++G ++G++ +++ +
Sbjct: 125 ELVRGILETEMDFMEERHSRLAGFWDTIASMGPAWGMIGTLIGLINMLKAM---GDDMSA 181
Query: 171 SIPGIIESLISILLGLCVS 189
P + +LI+ L G ++
Sbjct: 182 IGPNMATALITTLYGSVIA 200
>gi|20093212|ref|NP_619287.1| MotA/TolQ/ExbB proton channel family protein [Methanosarcina
acetivorans C2A]
gi|19918561|gb|AAM07767.1| MotA/TolQ/ExbB proton channel family protein [Methanosarcina
acetivorans C2A]
Length = 273
Score = 45.9 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 20/166 (12%), Positives = 64/166 (38%), Gaps = 15/166 (9%)
Query: 27 IITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAA 86
++ +L + + S +I + + R R+ E + + K++KN A
Sbjct: 22 VVIVLMLSVLASLILIGEFLSEYAKRHRDIRKLED------DCKELGKTVKNLEFPEAAK 75
Query: 87 IFMSAMSEWKKS---CDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
A+ E +++ + I+ R ++ A ++++L +++
Sbjct: 76 ----ALREIRQNFMVTSFSRDAAPFIEQRYFSAIEKLAAEYEIGMSKQLEKTKILATISP 131
Query: 144 LVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVS 189
++G++G ++ + ++ + ++ + + ++GL
Sbjct: 132 MLGLMGTLIPLGPALIGLS--QGDIATLANNLMIAFATTVVGLFAG 175
>gi|308071043|ref|YP_003872648.1| hypothetical protein PPE_04350 [Paenibacillus polymyxa E681]
gi|305860322|gb|ADM72110.1| Conserved hypothetical protein [Paenibacillus polymyxa E681]
Length = 275
Score = 45.9 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 19/123 (15%), Positives = 47/123 (38%), Gaps = 6/123 (4%)
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGI--QDRIDRMMDVAIARELE 126
+E + G+ A+ ++ +G + I Q++I +++++ +
Sbjct: 78 IEDLVSMAATSRRSGVLALERTSSEHPNAFLREGLQLVIDGTEQEQIKQILELELDAIEH 137
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGL 186
+ S +GI+G V+G++ S+ + P I + I+ L G+
Sbjct: 138 KHEGYAKIFESAGGYAPTMGIIGTVMGLIHVLGSL----TEPTALGPSIAVAFIATLYGV 193
Query: 187 CVS 189
+
Sbjct: 194 ASA 196
>gi|171913016|ref|ZP_02928486.1| hypothetical protein VspiD_17590 [Verrucomicrobium spinosum DSM
4136]
Length = 280
Score = 45.9 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 28/210 (13%), Positives = 68/210 (32%), Gaps = 27/210 (12%)
Query: 29 TLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIF 88
+L+ F + W ++ + R+ F + V + A++
Sbjct: 39 IILWAF--VCWIRMLVTASQLRRCRKADDAFLKAHQDASHSLEVFQVGLTFEGAPRHAVY 96
Query: 89 MSAMSEWK---------------KSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLS 133
+++ E + G SP D + ++ + E+ + L
Sbjct: 97 LTSAREMAFHLMGSDSVDKNFSIRLRAAGRISP-SQMDSVRKVQERTADFTSRELGDGLG 155
Query: 134 FLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSS 193
+G+L A+L ++ I+ ++ + L + V IP
Sbjct: 156 --DGSVDILPFLGLLAALLSVVVDVSGGVTGPQL-------IVSAVTPMALAVVVFIPLM 206
Query: 194 IAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
+ +N ++ + + ++ FA E + R
Sbjct: 207 LWHNAMVQRVRDISGEVGDFAVELATQFDR 236
>gi|90022458|ref|YP_528285.1| hypothetical protein Sde_2816 [Saccharophagus degradans 2-40]
gi|89952058|gb|ABD82073.1| MotA/TolQ/ExbB proton channel [Saccharophagus degradans 2-40]
Length = 131
Score = 45.9 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 12/43 (27%), Positives = 23/43 (53%)
Query: 150 AVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPS 192
+ G++ F IA ++ GI ++L++ LGL +IP+
Sbjct: 65 TITGLLDCFAGIANQGADGSQISAGIGDALLTTQLGLVCAIPA 107
>gi|171911363|ref|ZP_02926833.1| hypothetical protein VspiD_09315 [Verrucomicrobium spinosum DSM
4136]
Length = 463
Score = 45.9 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 21/114 (18%), Positives = 47/114 (41%), Gaps = 8/114 (7%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI 172
+ MM + + I L + A L+G +G V+G+ ++ ++V +I
Sbjct: 222 VGSMMSSQSSIDGARIGGSYIMLKAFLWAIPLMGFIGTVIGLSHAIGGMSFANMDDVSAI 281
Query: 173 --------PGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFS 218
G+ + + LLGL +++ + N ++ + +++ F NE
Sbjct: 282 VGSISAVTSGLGTAFDATLLGLVLAVFLNFPMNALAKNEDEMLNEIDAFCNEVL 335
>gi|299822261|ref|ZP_07054147.1| chemotaxis protein MotA [Listeria grayi DSM 20601]
gi|299815790|gb|EFI83028.1| chemotaxis protein MotA [Listeria grayi DSM 20601]
Length = 278
Score = 45.9 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 17/138 (12%), Positives = 45/138 (32%), Gaps = 7/138 (5%)
Query: 67 QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
++ + +++ + L ++ + + + + M+ ++ E
Sbjct: 80 RTFKEYADTIRRSGVLALEEEVDEIPDKFLRRGLRLVVDGQSSPEFLRETMEEEVSSMEE 139
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGL 186
S S +G+LGA +G++ G SN I + + + G+
Sbjct: 140 RHENYAKIFASAGSYAPTLGVLGAAMGLIHAM----GQMSNPDKLSEAIAAAFVCTIFGI 195
Query: 187 CVSIPSSIAYNKFIEDSK 204
+ +N F +
Sbjct: 196 FTG---YVLWNPFANKLR 210
>gi|298675177|ref|YP_003726927.1| MotA/TolQ/ExbB proton channel [Methanohalobium evestigatum Z-7303]
gi|298288165|gb|ADI74131.1| MotA/TolQ/ExbB proton channel [Methanohalobium evestigatum Z-7303]
Length = 207
Score = 45.9 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 23/169 (13%), Positives = 56/169 (33%), Gaps = 21/169 (12%)
Query: 27 IITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS------LETVCKSLKNHH 80
+I LL +F + S +I + + R E + E ++L+N
Sbjct: 22 VIILLILFIVASLVLIGEFLSEYSKRSRDVNNLEHTCNHVEDNIKDSAYEKAAEALRNLK 81
Query: 81 NIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSS 140
+ F + + D I +RI + ++L ++
Sbjct: 82 QNHIVTSFS------RDAADHLENQRIPSIERIS-------GEYEIRMAKQLEHTKIIAV 128
Query: 141 AGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVS 189
++G++G ++ + + N V ++ + + ++GL
Sbjct: 129 VAPMLGLMGTLIPLGPALIGL--TEGNIVQLANNLMVAFATTVVGLFAG 175
>gi|146308884|ref|YP_001189349.1| MotA/TolQ/ExbB proton channel [Pseudomonas mendocina ymp]
gi|145577085|gb|ABP86617.1| outer membrane transport energization protein ExbB [Pseudomonas
mendocina ymp]
Length = 182
Score = 45.9 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 30/197 (15%), Positives = 73/197 (37%), Gaps = 41/197 (20%)
Query: 17 FMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSL 76
FM G ++ L + ++ W+++ ++
Sbjct: 21 FMSAGGV---VMWALALLCVVFWTLVFERFWYMRR------------------------- 52
Query: 77 KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLG 136
IF + E +++ + G R R+ +A AR +++ L
Sbjct: 53 ----------IFPRWVQERREAWQQVLADDNGNWQRAVRLAWLAQAR--QQLAAPLRLGK 100
Query: 137 SMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIA 195
++ + L+G+LG VLGM+ F +A + N G+ ++ + + G+ ++IP +
Sbjct: 101 TLVALYPLLGLLGTVLGMIAVFDVLALNGTGNPRGMAAGVWQATLPTMAGMVLAIPGLFS 160
Query: 196 YNKFIEDSKKFAMQMEG 212
+ ++ + ++
Sbjct: 161 LARLEREASQAIERLAD 177
>gi|302389669|ref|YP_003825490.1| MotA/TolQ/ExbB proton channel [Thermosediminibacter oceani DSM
16646]
gi|302200297|gb|ADL07867.1| MotA/TolQ/ExbB proton channel [Thermosediminibacter oceani DSM
16646]
Length = 268
Score = 45.9 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 14/79 (17%), Positives = 34/79 (43%), Gaps = 4/79 (5%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ + +++ +A E E S +M + G++G ++G++ I +
Sbjct: 121 ELVKNILETELAFLEERHKEGQSIFETMGALAPAYGLIGTIIGLIQMLNKI----DDPSA 176
Query: 171 SIPGIIESLISILLGLCVS 189
PG+ +LI+ G ++
Sbjct: 177 VGPGMAVALITTFYGAVLA 195
>gi|319790109|ref|YP_004151742.1| MotA/TolQ/ExbB proton channel [Thermovibrio ammonificans HB-1]
gi|317114611|gb|ADU97101.1| MotA/TolQ/ExbB proton channel [Thermovibrio ammonificans HB-1]
Length = 163
Score = 45.9 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 22/98 (22%), Positives = 49/98 (50%), Gaps = 1/98 (1%)
Query: 109 IQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN 168
+++ ++ ++ + FL + + L+G+LG VLG+M F ++A ++
Sbjct: 49 VEEADEKSAELIYNTYTAKFDRGKGFLMFVVTGAPLLGLLGTVLGIMNSFSTMAEKGISD 108
Query: 169 VVSIP-GIIESLISILLGLCVSIPSSIAYNKFIEDSKK 205
+ ++ GI +L + LG+ VS+ + Y+ SK+
Sbjct: 109 IAAVSKGIAFALEATALGIVVSLFALAYYHVVNALSKR 146
>gi|150388138|ref|YP_001318187.1| MotA/TolQ/ExbB proton channel [Alkaliphilus metalliredigens QYMF]
gi|149948000|gb|ABR46528.1| MotA/TolQ/ExbB proton channel [Alkaliphilus metalliredigens QYMF]
Length = 280
Score = 45.6 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 23/121 (19%), Positives = 48/121 (39%), Gaps = 5/121 (4%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
D I+ ++D I + + + L ++ G++G ++GM+G +I S
Sbjct: 131 SDAIEDILDNDIESRQMNLYKCHNVLNMIAHIAPAFGLIGTLVGMIGLLANI----SIPD 186
Query: 170 VSIPGIIESLISILLG-LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
+ + +L+S L G L +I + + E ++ +Q I T N
Sbjct: 187 QIMNNMAAALVSTLYGSLIANIIAVPLMARLKEHIEQRVLQYRIIKEGILLIAQEDTARN 246
Query: 229 I 229
+
Sbjct: 247 V 247
>gi|16329550|ref|NP_440278.1| biopolymer transport ExbB protein [Synechocystis sp. PCC 6803]
gi|3913624|sp|P72941|EXBL2_SYNY3 RecName: Full=Putative biopolymer transport protein exbB-like 2
gi|1652033|dbj|BAA16958.1| biopolymer transport ExbB protein [Synechocystis sp. PCC 6803]
Length = 227
Score = 45.6 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 37/206 (17%), Positives = 73/206 (35%), Gaps = 42/206 (20%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSW----------SVIIQKSVNFITLRRQFREFE 60
++ L + G + W S II++ + + + +
Sbjct: 1 MNPIELMQKGG--------------VAMWPLLLLSILSVSTIIERLWFWGQVILKSSQTA 46
Query: 61 QLFW--SGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMD 118
+ + +T + ++ +A ++ R P + ++
Sbjct: 47 SRILDTAARDWDTAIRVAQDSRRFPIAKYLLA-----------PLRLPHPDPEVFHLALE 95
Query: 119 VAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA----GYYSNNVVSIPG 174
A +L + L ++ + L+G+LG VLG++ SI G S V++ G
Sbjct: 96 SAADDQLALMRRGDKILEAIIALSPLLGLLGTVLGLIQSLSSIQISDLGTASTAGVTL-G 154
Query: 175 IIESLISILLGLCVSIPSSIAYNKFI 200
I E+LIS GL ++I S Y F
Sbjct: 155 IGEALISTAAGLIIAIVSLAFYRVFQ 180
>gi|254421832|ref|ZP_05035550.1| hypothetical protein S7335_1982 [Synechococcus sp. PCC 7335]
gi|196189321|gb|EDX84285.1| hypothetical protein S7335_1982 [Synechococcus sp. PCC 7335]
Length = 127
Score = 45.6 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 18/85 (21%), Positives = 44/85 (51%), Gaps = 6/85 (7%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS--GQS 68
+S+ +F G+ ++ L +FS+ + +V I++ + + +++Q R+F + +
Sbjct: 1 MSLTEIFSAGGV----VMWPLLLFSLCAIAVTIERGLFWFRIKKQERDFAKDILQIYRAN 56
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMS 93
V LK H ++ ++ IF+ A+
Sbjct: 57 PYAVFAKLKQHIDLPVSRIFLEALE 81
>gi|332702328|ref|ZP_08422416.1| MotA/TolQ/ExbB proton channel [Desulfovibrio africanus str. Walvis
Bay]
gi|332552477|gb|EGJ49521.1| MotA/TolQ/ExbB proton channel [Desulfovibrio africanus str. Walvis
Bay]
Length = 253
Score = 45.6 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 22/132 (16%), Positives = 49/132 (37%), Gaps = 8/132 (6%)
Query: 73 CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKL 132
+ + L I E+ K + + Q I +M+ I
Sbjct: 84 ANRARREGILSLEPILKEIDDEYLKKGLQLTVDGLEPQT-IQEIMETEIHYLESRHETGA 142
Query: 133 SFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPS 192
LG+M + +G++G V+G++ ++ S+ P + +LI+ G ++ +
Sbjct: 143 EILGAMGNYAPALGMIGTVIGLVAMLSTM----SDPSTIGPAMAVALITTFYG---ALLA 195
Query: 193 SIAYNKFIEDSK 204
++ +N K
Sbjct: 196 NLVFNPMAGKLK 207
>gi|113475536|ref|YP_721597.1| MotA/TolQ/ExbB proton channel [Trichodesmium erythraeum IMS101]
gi|110166584|gb|ABG51124.1| MotA/TolQ/ExbB proton channel [Trichodesmium erythraeum IMS101]
Length = 474
Score = 45.2 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 19/103 (18%), Positives = 42/103 (40%), Gaps = 7/103 (6%)
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYS--NNVVSIPGIIESLI----SILLG 185
L + ++ L GI G +G++ ++ S + +I + +L + + G
Sbjct: 162 LFTITNIQKIALRAGIFGTFIGLLEAIIQLSQIGSEVTPIEAIKNLSGALFISFSTTIAG 221
Query: 186 LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
L V+I + +K+ ME + E +L+R + +
Sbjct: 222 LEVAILLGFLLMILRKRQEKYFRDMES-SVEVILLLARNADND 263
>gi|254779212|ref|YP_003057317.1| flagellar motor protein MotA [Helicobacter pylori B38]
gi|254001123|emb|CAX29078.1| Chemotaxis protein MotA (Motility protein A); putative membrane
protein [Helicobacter pylori B38]
Length = 257
Score = 45.2 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 15/123 (12%), Positives = 44/123 (35%), Gaps = 5/123 (4%)
Query: 67 QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
++L + + + L ++ ++ ++ + ++++I E
Sbjct: 79 KNLVELATLARKDGVLSLEGRVAQIEDDFTRNGLSMIIDGKDLK-SVKESLEISIEEMEE 137
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGL 186
+ + +G++GAV+G+M Q + N GI + + + G+
Sbjct: 138 YYHGAAHYWETAGETAPTMGLVGAVMGLMLALQKL----DNPAEMAAGIAGAFTATVTGI 193
Query: 187 CVS 189
+
Sbjct: 194 MCA 196
>gi|317011032|gb|ADU84779.1| flagellar motor protein MotA [Helicobacter pylori SouthAfrica7]
Length = 257
Score = 45.2 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 15/123 (12%), Positives = 44/123 (35%), Gaps = 5/123 (4%)
Query: 67 QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
++L + + + L ++ ++ ++ + ++++I E
Sbjct: 79 KNLVELATLARKDGVLSLEGRVAQIEDDFTRNGLSMIIDGKDLK-SVKESLEISIEEMEE 137
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGL 186
+ + +G++GAV+G+M Q + N GI + + + G+
Sbjct: 138 YYHGAAHYWETAGETAPTMGLVGAVMGLMLALQKL----DNPAEMAAGIAGAFTATVTGI 193
Query: 187 CVS 189
+
Sbjct: 194 MCA 196
>gi|291280095|ref|YP_003496930.1| flagellar motor protein MotA [Deferribacter desulfuricans SSM1]
gi|290754797|dbj|BAI81174.1| flagellar motor protein MotA [Deferribacter desulfuricans SSM1]
Length = 254
Score = 45.2 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 16/99 (16%), Positives = 45/99 (45%), Gaps = 7/99 (7%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ I +++ ++ E E + L S++S +G++G ++G++ Q++ S+
Sbjct: 121 EVIKSILETELSYMEERHKEGVGILESIASFAPAMGMIGTLIGLVAMLQTM----SDPSS 176
Query: 171 SIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQ 209
P + +L++ G +I +++ K + +
Sbjct: 177 IGPAMAVALLTTFYG---AIIANLFAAPLAGKLKTRSAE 212
>gi|46579054|ref|YP_009862.1| chemotaxis protein PomA [Desulfovibrio vulgaris str. Hildenborough]
gi|120603362|ref|YP_967762.1| MotA/TolQ/ExbB proton channel [Desulfovibrio vulgaris DP4]
gi|46448467|gb|AAS95121.1| chemotaxis protein PomA [Desulfovibrio vulgaris str. Hildenborough]
gi|120563591|gb|ABM29335.1| MotA/TolQ/ExbB proton channel [Desulfovibrio vulgaris DP4]
gi|311232900|gb|ADP85754.1| MotA/TolQ/ExbB proton channel [Desulfovibrio vulgaris RCH1]
Length = 250
Score = 45.2 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 23/151 (15%), Positives = 60/151 (39%), Gaps = 8/151 (5%)
Query: 67 QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
Q++E +CK L A+ + + + QD++ ++D I +
Sbjct: 75 QTVEDICKLADTARRESLVALEKVPLQDEFLKKGIRMVADGSSQDQVTALLDAEINFMKQ 134
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGL 186
+ + SA G++G ++G++ Q++ S+ P + +L++ G
Sbjct: 135 RHRRGQAVFKGLGSAAPAFGMIGTLVGLVNMLQNL----SDPASIGPAMAVALLTTFYG- 189
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGFANEF 217
++ S++ + + ++ + E F +
Sbjct: 190 --AVLSNLMFLPMAKKLEERSFD-EQFMMQL 217
>gi|157962806|ref|YP_001502840.1| flagellar motor protein PomA [Shewanella pealeana ATCC 700345]
gi|157847806|gb|ABV88305.1| MotA/TolQ/ExbB proton channel [Shewanella pealeana ATCC 700345]
Length = 255
Score = 45.2 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 27/182 (14%), Positives = 63/182 (34%), Gaps = 10/182 (5%)
Query: 13 IFALFMQMGL-AVKCIITLLFIFSILSWSVIIQKS---VNFITLRRQFREFEQLFWSGQS 68
I A+ G+ + ++L + I + V++ K + + + F +
Sbjct: 17 IMAMVSGGGIGIFINVPSILIVM-IGTLFVVMMKYNLKQFLGSAKIAAKAFIFKLDKPED 75
Query: 69 L-ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
L E G A+ + +S D + ++ IA E
Sbjct: 76 LIEQSISMADAARKGGFLALEEAEISNSFMQKAVDMLVDGHDGDVVRDALEKDIALTEER 135
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLC 187
+ S+ +G++G ++G++G ++ + P + +L++ L G
Sbjct: 136 HRTGIGIFKSIGDVAPAMGMIGTLIGLVGMLSNM----DDPKSIGPAMAVALLTTLYGAV 191
Query: 188 VS 189
V+
Sbjct: 192 VA 193
>gi|148239043|ref|YP_001224430.1| biopolymer transport protein [Synechococcus sp. WH 7803]
gi|147847582|emb|CAK23133.1| Possible biopolymer transport protein [Synechococcus sp. WH 7803]
Length = 173
Score = 44.8 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 20/100 (20%), Positives = 41/100 (41%), Gaps = 14/100 (14%)
Query: 125 LEEITEKL----SFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV---SIPGIIE 177
E + +L L G L+G+L V+G+M Q++ + I G +
Sbjct: 69 QERLERQLCRWDGILELCMVLGPLLGLLATVIGLMQLLQALGPGLTLPSQGGDLIAGYGQ 128
Query: 178 SLISILLGLCVSIPSSIAYNKFIEDSKKFAMQ--MEGFAN 215
LI +LGL ++ + ++ + Q ++ F++
Sbjct: 129 VLIGTVLGLSIAALAL-----LVQRLNRLRAQVVLDAFSD 163
>gi|262164457|ref|ZP_06032195.1| ferric siderophore transport system biopolymer transport protein
ExbB [Vibrio mimicus VM223]
gi|262026837|gb|EEY45504.1| ferric siderophore transport system biopolymer transport protein
ExbB [Vibrio mimicus VM223]
Length = 228
Score = 44.8 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 23/186 (12%), Positives = 60/186 (32%), Gaps = 8/186 (4%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAI 87
LF S L+ ++ ++ + + + S + + +
Sbjct: 15 AWPLFSCSALTVMLLAERLFQVLLSLTVGKGAIRHALRAASPNNTTQLAELTEHFSSKRP 74
Query: 88 FMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGI 147
+ + +D + + + L L + L+G+
Sbjct: 75 VL--YRGVAMLLAHHQFDKVLREDAAGIWLQEQRHQF----SSGLRLLTLIGVISPLLGL 128
Query: 148 LGAVLGMMGFFQSIAGYYSNNV--VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKK 205
LG VLG++ F+ +A + V G+ ++ + GL +++P+ + +
Sbjct: 129 LGTVLGLIEMFKGVAATTGSITPNVLADGLGIAMYTTAAGLMIALPAVAGAQLLNLWADR 188
Query: 206 FAMQME 211
++E
Sbjct: 189 TMAKLE 194
>gi|303239755|ref|ZP_07326279.1| MotA/TolQ/ExbB proton channel [Acetivibrio cellulolyticus CD2]
gi|302592692|gb|EFL62416.1| MotA/TolQ/ExbB proton channel [Acetivibrio cellulolyticus CD2]
Length = 260
Score = 44.8 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 22/139 (15%), Positives = 54/139 (38%), Gaps = 8/139 (5%)
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
+ + + + L +++ K G ++ I +++V I E
Sbjct: 84 ELSQMARREGLLSLEQTIEKTENQFMK-RSLGMVIDGVEEEYIREVLNVEIDSMEERHRA 142
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSI 190
S + SA +G+LGAV+G++G ++ ++ I + ++ L G+ +
Sbjct: 143 AASIFSTAGSAAPTLGVLGAVIGLIGALGNL----NDTEKLAHMIAAAFVATLYGIFIG- 197
Query: 191 PSSIAYNKFIEDSKKFAMQ 209
+ + F K+ + +
Sbjct: 198 --YVLCHPFASRLKRKSHE 214
>gi|317151981|ref|YP_004120029.1| MotA/TolQ/ExbB proton channel [Desulfovibrio aespoeensis Aspo-2]
gi|316942232|gb|ADU61283.1| MotA/TolQ/ExbB proton channel [Desulfovibrio aespoeensis Aspo-2]
Length = 253
Score = 44.8 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 14/92 (15%), Positives = 41/92 (44%), Gaps = 7/92 (7%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI 172
I +++ ++ E + + + +G++G V+G++ Q++ S+
Sbjct: 123 IQEILETEVSYLSERHATGADVVAVLGTLAPAMGMIGTVVGLVQMLQTM----SDPSTIG 178
Query: 173 PGIIESLISILLGLCVSIPSSIAYNKFIEDSK 204
P + +L++ L G ++ +++ +N K
Sbjct: 179 PAMAVALLTTLYG---AMLANLVFNPMAGKLK 207
>gi|253702422|ref|YP_003023611.1| MotA/TolQ/ExbB proton channel [Geobacter sp. M21]
gi|251777272|gb|ACT19853.1| MotA/TolQ/ExbB proton channel [Geobacter sp. M21]
Length = 254
Score = 44.8 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 22/109 (20%), Positives = 40/109 (36%), Gaps = 5/109 (4%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI 172
+ M++ + S +GI+GAVLG++ ++ S+
Sbjct: 124 LRETMEIELGSFEAHAKGSAEVFESAGGFAPTIGIIGAVLGLIHVMSNL----SDPSKLG 179
Query: 173 PGIIESLISILLGLCVS-IPSSIAYNKFIEDSKKFAMQMEGFANEFSAI 220
GI + ++ + GL V+ I K K+ +Q E AI
Sbjct: 180 GGIAVAFVATIYGLMVANIFCIPFGTKLKHRLKEELLQKEMVIEGLIAI 228
>gi|297183086|gb|ADI19230.1| flagellar motor component [uncultured delta proteobacterium
HF0200_14D13]
Length = 321
Score = 44.8 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 28/144 (19%), Positives = 58/144 (40%)
Query: 46 SVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARS 105
I RQ R ++ Q++ +C+ N+ I I S+ +
Sbjct: 107 FWYAIQAFRQGRREDEFLAVYQTVVNMCEKRSNNELITDEEIEAVKSSDLRNWLQDFIAV 166
Query: 106 PIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYY 165
I ++ I+ ++ I E++ L M A G++G V+G++ S +
Sbjct: 167 DIVSEEMIEEIVRSEIEMYNYRSFEEIDLLEFMGKATPAFGMIGTVVGLILMLGSSSAEG 226
Query: 166 SNNVVSIPGIIESLISILLGLCVS 189
++ + G+ +LI+ L G+ +S
Sbjct: 227 ADIAGVMGGMSVALITTLYGVLLS 250
>gi|325997690|gb|ADZ49898.1| Flagellar motor rotation protein [Helicobacter pylori 2017]
Length = 247
Score = 44.8 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 15/120 (12%), Positives = 43/120 (35%), Gaps = 5/120 (4%)
Query: 67 QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
++L + + + L ++ ++ ++ + ++++I E
Sbjct: 69 KNLVELATLARKDGVLSLEGRVAQIEDDFTRNGLSMIIDGKDLK-SVKESLEISIEEMEE 127
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGL 186
+ + +G++GAV+G+M Q + N GI + + + G+
Sbjct: 128 YYHGAAHYWETAGETAPTMGLVGAVMGLMLALQKL----DNPAEMAAGIAGAFTATVTGI 183
>gi|218290400|ref|ZP_03494530.1| MotA/TolQ/ExbB proton channel [Alicyclobacillus acidocaldarius
LAA1]
gi|218239528|gb|EED06722.1| MotA/TolQ/ExbB proton channel [Alicyclobacillus acidocaldarius
LAA1]
Length = 265
Score = 44.8 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 21/111 (18%), Positives = 44/111 (39%), Gaps = 5/111 (4%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ + M+ +A E ++ + +GI+G V+G++ S++ S
Sbjct: 122 ELVKDMLQTELAHIEERHEVGINMFEAAGGFAPTMGIIGTVMGLVHVLGSLSNVSS---- 177
Query: 171 SIPGIIESLISILLGLCVS-IPSSIAYNKFIEDSKKFAMQMEGFANEFSAI 220
P I + I+ L G+ + I NK S++ ++ E +I
Sbjct: 178 LGPEIATAFIATLYGVASANIFWLPVANKLRARSQEEMLEREMTLEGILSI 228
>gi|119503685|ref|ZP_01625768.1| flagellar motor protein PomA [marine gamma proteobacterium
HTCC2080]
gi|119460747|gb|EAW41839.1| flagellar motor protein PomA [marine gamma proteobacterium
HTCC2080]
Length = 255
Score = 44.8 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 19/145 (13%), Positives = 55/145 (37%), Gaps = 7/145 (4%)
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ + GL A+ +A+SE Q+ + +M + + ++
Sbjct: 77 IAEIVNLANIGRKEGLLALEKAAISESFLKDGIQMLVDGSNQEVVKAVMAKDMQQTMDRH 136
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCV 188
++ +G++G ++G++G ++ ++ P + +L++ L G +
Sbjct: 137 NWGERVWRAVGDVAPAMGMIGTLVGLVGMLVNM----NDPKAIGPQMAVALLTTLYGAVL 192
Query: 189 SIPSSIAYN---KFIEDSKKFAMQM 210
+ ++ + ++K QM
Sbjct: 193 ANMVALPIADKLHLRKSNEKLIHQM 217
>gi|309388828|gb|ADO76708.1| MotA/TolQ/ExbB proton channel [Halanaerobium praevalens DSM 2228]
Length = 270
Score = 44.8 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 18/123 (14%), Positives = 45/123 (36%), Gaps = 6/123 (4%)
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDR--IDRMMDVAIARELE 126
+E + + GL A+ A + KG + + D + +++ + E
Sbjct: 77 IENLVNFAEKARREGLLALEDDASKMEDEFLQKGIQLVVDGTDPELVRNILETKLTFLQE 136
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGL 186
+ +M G++G ++G++ + + G+ +LI+ L G
Sbjct: 137 RHAKGRGIFATMGELAPAFGMVGTLIGLIQMLSQL----DDPDQLGGGMAVALITTLYGA 192
Query: 187 CVS 189
++
Sbjct: 193 LLA 195
>gi|167624990|ref|YP_001675284.1| flagellar motor protein PomA [Shewanella halifaxensis HAW-EB4]
gi|167355012|gb|ABZ77625.1| MotA/TolQ/ExbB proton channel [Shewanella halifaxensis HAW-EB4]
Length = 255
Score = 44.8 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 25/164 (15%), Positives = 56/164 (34%), Gaps = 9/164 (5%)
Query: 30 LLFIFSILSWSVIIQKS---VNFITLRRQFREFEQLFWSGQSL-ETVCKSLKNHHNIGLA 85
+L + I S V++ K + + + F + L E G
Sbjct: 35 ILIVM-IGSLFVVMMKYNLKQFLGSAKIAAKAFIFKLDKPEDLIEQSISMADAARKGGFL 93
Query: 86 AIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLV 145
A+ + +S D + ++ IA E + S+ +
Sbjct: 94 ALEEAEISNSFMQKAVDMLVDGHDGDVVRDALEKDIALTEERHKTGIGIFKSIGDVAPAM 153
Query: 146 GILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVS 189
G++G ++G++G ++ + P + +L++ L G V+
Sbjct: 154 GMIGTLIGLVGMLSNM----DDPKSIGPAMAVALLTTLYGAVVA 193
>gi|317051550|ref|YP_004112666.1| MotA/TolQ/ExbB proton channel [Desulfurispirillum indicum S5]
gi|316946634|gb|ADU66110.1| MotA/TolQ/ExbB proton channel [Desulfurispirillum indicum S5]
Length = 255
Score = 44.8 bits (105), Expect = 0.011, Method: Composition-based stats.
Identities = 16/121 (13%), Positives = 45/121 (37%), Gaps = 5/121 (4%)
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
L + + L E+ + K A + ++ +M+ + +
Sbjct: 80 LVDFATRARRDGILALETAAEEVDDEFLREGIKLAVDGTD-PELVNAIMETKLQYIAQRH 138
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCV 188
+ L S+ +G++G ++G++ Q++ + P + +L++ L G +
Sbjct: 139 QSGMGILNSIGMFAPSMGMIGTLIGLVAMLQTM----DDPSTIGPAMAIALLTTLYGSMI 194
Query: 189 S 189
+
Sbjct: 195 A 195
>gi|75675429|ref|YP_317850.1| MotA/TolQ/ExbB proton channel [Nitrobacter winogradskyi Nb-255]
gi|74420299|gb|ABA04498.1| MotA/TolQ/ExbB proton channel [Nitrobacter winogradskyi Nb-255]
Length = 257
Score = 44.8 bits (105), Expect = 0.011, Method: Composition-based stats.
Identities = 29/195 (14%), Positives = 66/195 (33%), Gaps = 10/195 (5%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCI----ITLLFIFSILSWSVIIQKSVNFITLRRQF 56
M GLA I I + G + + ++F SI + + L
Sbjct: 4 MTGAGLAFGMIVIAMMVFMGGDLHMFVSEHAMIIIFGGSIAATMIRFPLGAILHGLPLGA 63
Query: 57 R-EFEQLFWSGQSL-ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRID 114
+ F S + L + + + + G + +E + + + I
Sbjct: 64 KYAFTMSRLSARDLVDELARIAEISRKQGPVGLEKVETTEPFLAKGVRFVADGYDLEFIR 123
Query: 115 RMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG 174
++ L + E ++ G++G ++GM+ F ++ ++ P
Sbjct: 124 DNLERDRDNFLMHLDEGSKIYRAIGDCAPAFGMIGTLIGMVQMFANM----TDPSKLGPF 179
Query: 175 IIESLISILLGLCVS 189
+ +L++ L G V+
Sbjct: 180 MATALLATLYGALVA 194
>gi|91774177|ref|YP_566869.1| MotA/TolQ/ExbB proton channel [Methanococcoides burtonii DSM 6242]
gi|91713192|gb|ABE53119.1| MotA/TolQ/ExbB-like proton channel protein [Methanococcoides
burtonii DSM 6242]
Length = 207
Score = 44.4 bits (104), Expect = 0.011, Method: Composition-based stats.
Identities = 26/171 (15%), Positives = 61/171 (35%), Gaps = 24/171 (14%)
Query: 48 NFITLRRQFREFEQLFWS------GQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDK 101
+ R RE E++ S SL+ + L + L F E+ K
Sbjct: 43 EYAKRHRNVRELEKVGRSVQESVKASSLDNAAEKLHSLDQNQLVTSFAKDAGEYLK---- 98
Query: 102 GARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI 161
++ I D + +V +T++L +S+ ++G++G ++ + +
Sbjct: 99 --QNSISSIDWLSEEYEV-------RMTKRLEQTKILSTVAPMLGLMGTLIPLGPALIGL 149
Query: 162 AGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEG 212
A + + ++ + + +LGL + Y + + + M
Sbjct: 150 A--QGDILQLANNLMIAFATTVLGLFAG---VVGYVLTLIRKRWYWQDMAD 195
>gi|77918776|ref|YP_356591.1| proton conductor component of motor [Pelobacter carbinolicus DSM
2380]
gi|77544859|gb|ABA88421.1| proton conductor component of motor; no effect on switching
[Pelobacter carbinolicus DSM 2380]
Length = 257
Score = 44.4 bits (104), Expect = 0.011, Method: Composition-based stats.
Identities = 27/169 (15%), Positives = 60/169 (35%), Gaps = 7/169 (4%)
Query: 59 FEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQ--DRIDRM 116
F Q F S + + G+ ++ KG + + Q D++ M
Sbjct: 67 FAQRFSSTDRIAQIIDYAGKARKEGILSLQSVTKEVDDPFFLKGLQMAVDGQEPDKLKEM 126
Query: 117 MDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII 176
+D I E + +M + +G++G ++G++ Q++ ++ P +
Sbjct: 127 LDSEIEYLEERHDRGSEIMVAMGTYAPAMGMIGTLIGLVQMLQTM----NDPSSIGPAMA 182
Query: 177 ESLISILLGLCVS-IPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+L++ G ++ I K S + A +IL +
Sbjct: 183 VALLTTFYGAVIANIICMPMSGKLKNRSSDEVLDKTLIAEGMRSILEGE 231
>gi|294498804|ref|YP_003562504.1| chemotaxis protein MotA [Bacillus megaterium QM B1551]
gi|295704126|ref|YP_003597201.1| chemotaxis protein MotA [Bacillus megaterium DSM 319]
gi|294348741|gb|ADE69070.1| chemotaxis protein MotA [Bacillus megaterium QM B1551]
gi|294801785|gb|ADF38851.1| chemotaxis protein MotA [Bacillus megaterium DSM 319]
Length = 264
Score = 44.4 bits (104), Expect = 0.011, Method: Composition-based stats.
Identities = 17/95 (17%), Positives = 36/95 (37%), Gaps = 7/95 (7%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
D I ++ I E S + +G+LGAV+G++ ++ +
Sbjct: 123 DYIRDVLSEEIDAMEERHQTGASIFALAGTYAPTLGVLGAVIGLIAALGNM----EDTDT 178
Query: 171 SIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKK 205
I + ++ LLG+ + ++ F K+
Sbjct: 179 LGHAISAAFVATLLGIFTG---YVLWHPFANKLKR 210
>gi|83589324|ref|YP_429333.1| MotA/TolQ/ExbB proton channel [Moorella thermoacetica ATCC 39073]
gi|83572238|gb|ABC18790.1| MotA/TolQ/ExbB proton channel [Moorella thermoacetica ATCC 39073]
Length = 277
Score = 44.4 bits (104), Expect = 0.011, Method: Composition-based stats.
Identities = 20/128 (15%), Positives = 46/128 (35%), Gaps = 10/128 (7%)
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQ------DRIDRMMDVAI 121
L ++ N+ + F+ E D R+ + + ++ +++ I
Sbjct: 75 DLNETINAIVNYAVLARKEGFVRLEKELDGVKDDFLRTALQLVVDGTDPEQTRNVLEQYI 134
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLIS 181
E +S + +GI+G V+G++ ++ S P I + I+
Sbjct: 135 YATSERHHSGISLFEAAGGYAPTMGIIGTVMGLVHVLSNL----STPDKLGPSIAMAFIA 190
Query: 182 ILLGLCVS 189
L G+ +
Sbjct: 191 TLYGVSSA 198
>gi|225871804|ref|YP_002753258.1| chemotaxis MotA protein [Acidobacterium capsulatum ATCC 51196]
gi|225793187|gb|ACO33277.1| chemotaxis MotA protein [Acidobacterium capsulatum ATCC 51196]
Length = 269
Score = 44.4 bits (104), Expect = 0.011, Method: Composition-based stats.
Identities = 23/149 (15%), Positives = 57/149 (38%), Gaps = 7/149 (4%)
Query: 49 FITLRRQFREFEQLFWSGQ-SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPI 107
LRR + F Q +GQ +L+ + + G+ ++ + + +
Sbjct: 57 LAALRRLAQVFFQGKSAGQATLKQLVEFANKARRHGIVSLDQDLAKIKEPFLKQSIMLAV 116
Query: 108 GIQD--RIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYY 165
+ + ++M++ + E + + S +GI+GAVLG++ Q +
Sbjct: 117 DGTEPAELRKIMELQLDNLTEREEKIPAVFESAGGFSPTIGIIGAVLGLIQVMQHLDHID 176
Query: 166 SNNVVSIPGIIESLISILLGLCVSIPSSI 194
GI + ++ + G+ + + +
Sbjct: 177 Q----VGRGIAVAFVATIYGVAAANLAFL 201
>gi|307637505|gb|ADN79955.1| Flagellar motor rotation protein [Helicobacter pylori 908]
gi|325996094|gb|ADZ51499.1| Flagellar motor rotation protein [Helicobacter pylori 2018]
Length = 247
Score = 44.4 bits (104), Expect = 0.011, Method: Composition-based stats.
Identities = 15/120 (12%), Positives = 43/120 (35%), Gaps = 5/120 (4%)
Query: 67 QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
++L + + + L ++ ++ ++ + ++++I E
Sbjct: 69 KNLVELATLARKDGVLSLEGRVAQIEDDFTRNGLSMIIDGKDLK-SVKESLEISIEEMEE 127
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGL 186
+ + +G++GAV+G+M Q + N GI + + + G+
Sbjct: 128 YYHGAAHYWETAGETAPTMGLVGAVMGLMLALQKL----DNPAEMAAGIAGAFTATVTGI 183
>gi|315586520|gb|ADU40901.1| flagellar motor protein MotA [Helicobacter pylori 35A]
Length = 247
Score = 44.4 bits (104), Expect = 0.011, Method: Composition-based stats.
Identities = 15/120 (12%), Positives = 43/120 (35%), Gaps = 5/120 (4%)
Query: 67 QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
++L + + + L ++ ++ ++ + ++++I E
Sbjct: 69 KNLVELATLARKDGVLSLEGRVAQIEDDFTRNGLSMIIDGKDLK-SVKESLEISIEEMEE 127
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGL 186
+ + +G++GAV+G+M Q + N GI + + + G+
Sbjct: 128 YYHGAAHYWETAGETAPTMGLVGAVMGLMLALQKL----DNPAEMAAGIAGAFTATVTGI 183
>gi|78356760|ref|YP_388209.1| chemotaxis protein PomA [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
gi|78219165|gb|ABB38514.1| chemotaxis protein PomA [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
Length = 251
Score = 44.4 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 20/160 (12%), Positives = 62/160 (38%), Gaps = 11/160 (6%)
Query: 67 QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
+S++ + + L A+ ++ + + + + +M++ I+ +
Sbjct: 75 ESIQQIISLAEKARKESLVALEKVSVDDPYLKRGVQLVADGTEESLVRSVMEIDISIMKQ 134
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGL 186
+ + G++G ++G++ Q++ S+ P + +L++ G
Sbjct: 135 RHRRGQEVFKGLGTYAPAFGMIGTLVGLVQMLQNL----SDPASIGPAMAVALLTTFYG- 189
Query: 187 CVSIPSSIAY----NKFIEDSKKFAMQMEGFANEFSAILS 222
++ +++ + + E S + A ME +IL+
Sbjct: 190 --AVLANVFFLPMAKRLEERSNEEAHNMELTMEGVLSILN 227
>gi|237799668|ref|ZP_04588129.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. oryzae str.
1_6]
gi|331022523|gb|EGI02580.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. oryzae str.
1_6]
Length = 216
Score = 44.4 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 28/187 (14%), Positives = 68/187 (36%), Gaps = 48/187 (25%)
Query: 44 QKSVNFITLRRQFREFEQLFWSG----QSLETVC---------------KSLKNHHNIGL 84
++ + F +RRQ R + + + L H
Sbjct: 27 ERGIYFAYVRRQSRALQTALNASVHSEKDLPEALTRRTSLPLEMVLPVLAQKNAH----- 81
Query: 85 AAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLL 144
G + +D +++ ++ L + ++++A L
Sbjct: 82 -----------------------GSRRDLDDVIETQYLSTRAPLSRSLWLIETITTAAPL 118
Query: 145 VGILGAVLGMMGFFQSIAGYY-SNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDS 203
+G+LG +LG++ F+++A S+ GI +L + LG+ +++ + +N F +
Sbjct: 119 LGLLGTILGIIDTFKALASAGVSDPGQISAGIGTALFATGLGIAIALFCVVFHNFFQDSL 178
Query: 204 KKFAMQM 210
++ Q+
Sbjct: 179 ERINDQL 185
>gi|117921675|ref|YP_870867.1| MotA/TolQ/ExbB proton channel [Shewanella sp. ANA-3]
gi|117614007|gb|ABK49461.1| MotA/TolQ/ExbB proton channel [Shewanella sp. ANA-3]
Length = 243
Score = 44.4 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 29/181 (16%), Positives = 70/181 (38%), Gaps = 19/181 (10%)
Query: 29 TLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV-CKSLKNHHNIGLAAI 87
L I + L+ + +++S F+ +Q F S + K+L+ +
Sbjct: 16 WPLLICAFLALMICLERSALFL---------QQSFASISPKKQAWVKALRQSDAKASSET 66
Query: 88 FMSAMSEWKKSCDKGARSPIGIQDRIDR-------MMDVAIARELEEITEKLSFLGSMSS 140
+ + + D R + + D+ ++ + + ++ ++ L L +
Sbjct: 67 VQALIDSTSRQQDLLTRGANLLLKQADKPKPLREELLSLWLNKQQRDLQAGLKLLQVIGI 126
Query: 141 AGLLVGILGAVLGMMGFFQSIAGYYS--NNVVSIPGIIESLISILLGLCVSIPSSIAYNK 198
L+G+LG VLG++ F + G+ ++ + GL +++P+ A +
Sbjct: 127 ISPLLGLLGTVLGLIEMFAQLGQSQGPVTPSQLSAGLGLAMNTTAAGLIIAVPTITAAHL 186
Query: 199 F 199
F
Sbjct: 187 F 187
>gi|317178825|dbj|BAJ56613.1| flagellar motor protein MotA [Helicobacter pylori F30]
Length = 257
Score = 44.4 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 15/120 (12%), Positives = 43/120 (35%), Gaps = 5/120 (4%)
Query: 67 QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
++L + + + L ++ ++ ++ + ++++I E
Sbjct: 79 KNLVELATLARKDGVLSLEGRVAQIEDDFTRNGLSMIIDGKDLK-SVKESLEISIEEMEE 137
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGL 186
+ + +G++GAV+G+M Q + N GI + + + G+
Sbjct: 138 YYHGAAHYWETAGETAPTMGLVGAVMGLMLALQKL----DNPAEMAAGIAGAFTATVTGI 193
>gi|302875900|ref|YP_003844533.1| MotA/TolQ/ExbB proton channel [Clostridium cellulovorans 743B]
gi|307689334|ref|ZP_07631780.1| flagellar motor protein MotA [Clostridium cellulovorans 743B]
gi|302578757|gb|ADL52769.1| MotA/TolQ/ExbB proton channel [Clostridium cellulovorans 743B]
Length = 265
Score = 44.4 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 22/139 (15%), Positives = 56/139 (40%), Gaps = 8/139 (5%)
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
+ ++ + + + L ++ S + + + + I QD I + + I + E
Sbjct: 84 EMSQTTRKNGLLALESVVQSTENRFMRKGLEMVVDGIE-QDYIREVQTIEIEQMEERHRS 142
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSI 190
S + A +G+LGAV+G++G ++ ++ I + ++ L G+
Sbjct: 143 GASIFTTAGGAAPTLGVLGAVIGLIGALGNL----NDTEKLGHMIAAAFVATLYGIFFG- 197
Query: 191 PSSIAYNKFIEDSKKFAMQ 209
+ + F K+ + +
Sbjct: 198 --YVICHPFASRLKRKSHE 214
>gi|148266089|ref|YP_001232795.1| MotA/TolQ/ExbB proton channel [Geobacter uraniireducens Rf4]
gi|146399589|gb|ABQ28222.1| MotA/TolQ/ExbB proton channel [Geobacter uraniireducens Rf4]
Length = 256
Score = 44.4 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 22/109 (20%), Positives = 42/109 (38%), Gaps = 5/109 (4%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI 172
+ M++ +A E + +GI+GAVLG++ ++ S++
Sbjct: 124 LRETMEIELASFEEHAKASAEVFEAAGGFAPTIGIIGAVLGLIHVMNNL----SDSSKLG 179
Query: 173 PGIIESLISILLGLCVS-IPSSIAYNKFIEDSKKFAMQMEGFANEFSAI 220
GI + ++ + GL + I K K+ +Q E AI
Sbjct: 180 AGIAVAFVATIYGLMTANIICIPISTKLKLRLKEAILQKEMVIEGLIAI 228
>gi|255654792|ref|ZP_05400201.1| putative chemotaxis protein [Clostridium difficile QCD-23m63]
gi|296449537|ref|ZP_06891314.1| chemotaxis MotA protein [Clostridium difficile NAP08]
gi|296878140|ref|ZP_06902155.1| chemotaxis MotA protein [Clostridium difficile NAP07]
gi|296261601|gb|EFH08419.1| chemotaxis MotA protein [Clostridium difficile NAP08]
gi|296430893|gb|EFH16725.1| chemotaxis MotA protein [Clostridium difficile NAP07]
Length = 262
Score = 44.4 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 15/77 (19%), Positives = 34/77 (44%), Gaps = 3/77 (3%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI 172
I +++ I + E ++ S +GI+G V+G++ +++ SN
Sbjct: 124 IRSILESQIQITSKRHKEGIAIFDSAGGYAPTMGIIGTVMGLVHILGNLS---SNPDALG 180
Query: 173 PGIIESLISILLGLCVS 189
P I + ++ L G+ +
Sbjct: 181 PQISVAFLATLYGVGSA 197
>gi|330446168|ref|ZP_08309820.1| motA/TolQ/ExbB proton channel family protein [Photobacterium
leiognathi subsp. mandapamensis svers.1.1.]
gi|328490359|dbj|GAA04317.1| motA/TolQ/ExbB proton channel family protein [Photobacterium
leiognathi subsp. mandapamensis svers.1.1.]
Length = 233
Score = 44.4 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 30/192 (15%), Positives = 65/192 (33%), Gaps = 20/192 (10%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFI------TLRRQFREFEQLFWSGQSLETVCKSLKNHHN 81
L I S+L+ ++ ++ V + + +Q +L+ + + LK
Sbjct: 15 AWPLIICSVLTVMILAERLVQVLLCTGVGKTKVNAILAKQNRHDDCALDKLTEELKQQRP 74
Query: 82 IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSA 141
+ I AM + K R I + ++ L +
Sbjct: 75 LLYKGI---AMLIAHRHFTKPLREDAAAIWLIQKRTELRSGLRLLS---------LIGVI 122
Query: 142 GLLVGILGAVLGMMGFFQSIAGYYS--NNVVSIPGIIESLISILLGLCVSIPSSIAYNKF 199
L+G+LG VLG++ F I+ G+ ++ + GL +++P+
Sbjct: 123 SPLLGLLGTVLGLIEMFSGISQSTGSVTPSDLADGLGLAMRTTATGLLIALPAITGAQLL 182
Query: 200 IEDSKKFAMQME 211
+ ++E
Sbjct: 183 GLWADNVTAKLE 194
>gi|207109198|ref|ZP_03243360.1| flagellar motor protein MotA [Helicobacter pylori HPKX_438_CA4C1]
Length = 219
Score = 44.4 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 15/123 (12%), Positives = 44/123 (35%), Gaps = 5/123 (4%)
Query: 67 QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
++L + + + L ++ ++ ++ + ++++I E
Sbjct: 74 KNLVELATLARKDGVLSLEGRVAQVEDDFTRNGLSMIIDGKDLK-SVKESLEISIEEMEE 132
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGL 186
+ + +G++GAV+G+M Q + N GI + + + G+
Sbjct: 133 YYHGAAHYWETAGETAPTMGLVGAVMGLMLALQKL----DNPAEMAAGIAGAFTATVTGI 188
Query: 187 CVS 189
+
Sbjct: 189 MCA 191
>gi|330505168|ref|YP_004382037.1| MotA/TolQ/ExbB proton channel [Pseudomonas mendocina NK-01]
gi|328919454|gb|AEB60285.1| MotA/TolQ/ExbB proton channel [Pseudomonas mendocina NK-01]
Length = 182
Score = 44.4 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 30/197 (15%), Positives = 73/197 (37%), Gaps = 41/197 (20%)
Query: 17 FMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSL 76
FM G ++ L + ++ W+++ ++
Sbjct: 21 FMSAGGV---VMWALAVLCVVFWTLVFERFWYMRR------------------------- 52
Query: 77 KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLG 136
IF + E +++ + G R R+ +A AR +++ L
Sbjct: 53 ----------IFPRWVQERREAWQQVLADDNGNWQRAVRLAWLAQAR--QQLAAPLRLGK 100
Query: 137 SMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLCVSIPSSIA 195
++ + L+G+LG VLGM+ F +A + N G+ ++ + + G+ ++IP +
Sbjct: 101 TLVALYPLLGLLGTVLGMIAVFDVLALNGAGNPRGMAAGVWQATLPTMAGMVLAIPGLFS 160
Query: 196 YNKFIEDSKKFAMQMEG 212
+ ++ + ++
Sbjct: 161 LARLEREASQAIERLAD 177
>gi|167625312|ref|YP_001675606.1| MotA/TolQ/ExbB proton channel [Shewanella halifaxensis HAW-EB4]
gi|167355334|gb|ABZ77947.1| MotA/TolQ/ExbB proton channel [Shewanella halifaxensis HAW-EB4]
Length = 258
Score = 44.0 bits (103), Expect = 0.014, Method: Composition-based stats.
Identities = 32/194 (16%), Positives = 72/194 (37%), Gaps = 22/194 (11%)
Query: 29 TLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIF 88
LFI + LS +I+++ + + ++ W L + + ++
Sbjct: 18 WPLFICAFLSLMIILERLALML-----YELPKRDAW----LTQLRQQARSATPEQ-RQEL 67
Query: 89 MSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI-----ARELEEITEKLSFLGSMSSAGL 143
M+ +S+ + KG + ++ R M I ++ ++ L L +
Sbjct: 68 MAKISQGRSMLAKGTALLLSHGEQ-SRAMREEIVSLWLVKQKSKLLSGLKILQIIGIITP 126
Query: 144 LVGILGAVLGMMGFFQSIAGYYS--NNVVSIPGIIESLISILLGLCVSIPSSIAYNKFI- 200
L+G+LG VLG++ F + G+ ++ + GL +++P+ + F
Sbjct: 127 LLGLLGTVLGLIEMFNQLGLSDGPVTPSQLASGLGLAMNTTAAGLIIAVPAITMAHLFTL 186
Query: 201 ---EDSKKFAMQME 211
K A +
Sbjct: 187 WAERRCNKIAHALN 200
>gi|239827802|ref|YP_002950426.1| flagellar motor protein MotA [Geobacillus sp. WCH70]
gi|239808095|gb|ACS25160.1| MotA/TolQ/ExbB proton channel [Geobacillus sp. WCH70]
Length = 263
Score = 44.0 bits (103), Expect = 0.014, Method: Composition-based stats.
Identities = 19/96 (19%), Positives = 37/96 (38%), Gaps = 7/96 (7%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
QD I +M I E + + +G+LGAV+G++ +I N
Sbjct: 122 QDFIRDVMTEEIEAMEERHEANAAIFSQAGTYAPTLGVLGAVIGLISALGNI----DNIS 177
Query: 170 VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKK 205
I + ++ LLG+ + ++ F ++
Sbjct: 178 ELGKAISAAFVATLLGIFTG---YVLWHPFANKLRR 210
>gi|15611818|ref|NP_223469.1| flagellar motor protein MotA [Helicobacter pylori J99]
gi|15645434|ref|NP_207608.1| flagellar motor protein MotA [Helicobacter pylori 26695]
gi|108563225|ref|YP_627541.1| flagellar motor protein MotA [Helicobacter pylori HPAG1]
gi|188527340|ref|YP_001910027.1| flagellar motor protein MotA [Helicobacter pylori Shi470]
gi|208434726|ref|YP_002266392.1| flagellar motor rotation protein [Helicobacter pylori G27]
gi|210135014|ref|YP_002301453.1| flagellar motor protein MotA [Helicobacter pylori P12]
gi|217032505|ref|ZP_03437996.1| hypothetical protein HPB128_180g4 [Helicobacter pylori B128]
gi|217034138|ref|ZP_03439558.1| hypothetical protein HP9810_868g31 [Helicobacter pylori 98-10]
gi|298736518|ref|YP_003729044.1| chemotaxis protein MotA [Helicobacter pylori B8]
gi|308182971|ref|YP_003927098.1| flagellar motor protein MotA [Helicobacter pylori PeCan4]
gi|54037819|sp|P65411|MOTA_HELPJ RecName: Full=Motility protein A; AltName: Full=Chemotaxis protein
MotA
gi|54041481|sp|P65410|MOTA_HELPY RecName: Full=Motility protein A; AltName: Full=Chemotaxis protein
MotA
gi|2313947|gb|AAD07864.1| flagellar motor rotation protein (motA) [Helicobacter pylori 26695]
gi|4155315|gb|AAD06330.1| putative CHEMOTAXIS PROTEIN (MOTILITY PROTEIN A) [Helicobacter
pylori J99]
gi|107836998|gb|ABF84867.1| flagellar motor rotation protein [Helicobacter pylori HPAG1]
gi|188143580|gb|ACD47997.1| flagellar motor protein MotA [Helicobacter pylori Shi470]
gi|208432655|gb|ACI27526.1| flagellar motor rotation protein [Helicobacter pylori G27]
gi|210132982|gb|ACJ07973.1| flagellar motor rotation protein MotA [Helicobacter pylori P12]
gi|216943422|gb|EEC22878.1| hypothetical protein HP9810_868g31 [Helicobacter pylori 98-10]
gi|216945783|gb|EEC24406.1| hypothetical protein HPB128_180g4 [Helicobacter pylori B128]
gi|261837955|gb|ACX97721.1| flagellar motor rotation protein [Helicobacter pylori 51]
gi|298355708|emb|CBI66580.1| chemotaxis protein MotA [Helicobacter pylori B8]
gi|308062135|gb|ADO04023.1| flagellar motor protein MotA [Helicobacter pylori Cuz20]
gi|308063397|gb|ADO05284.1| flagellar motor protein MotA [Helicobacter pylori Sat464]
gi|308065156|gb|ADO07048.1| flagellar motor protein MotA [Helicobacter pylori PeCan4]
gi|317009175|gb|ADU79755.1| flagellar motor protein MotA [Helicobacter pylori India7]
gi|317012626|gb|ADU83234.1| flagellar motor protein MotA [Helicobacter pylori Lithuania75]
gi|317014224|gb|ADU81660.1| flagellar motor protein MotA [Helicobacter pylori Gambia94/24]
gi|317180578|dbj|BAJ58364.1| flagellar motor protein MotA [Helicobacter pylori F32]
gi|332673380|gb|AEE70197.1| flagellar motor protein MotA [Helicobacter pylori 83]
Length = 257
Score = 44.0 bits (103), Expect = 0.014, Method: Composition-based stats.
Identities = 15/120 (12%), Positives = 43/120 (35%), Gaps = 5/120 (4%)
Query: 67 QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
++L + + + L ++ ++ ++ + ++++I E
Sbjct: 79 KNLVELATLARKDGVLSLEGRVAQIEDDFTRNGLSMIIDGKDLK-SVKESLEISIEEMEE 137
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGL 186
+ + +G++GAV+G+M Q + N GI + + + G+
Sbjct: 138 YYHGAAHYWETAGETAPTMGLVGAVMGLMLALQKL----DNPAEMAAGIAGAFTATVTGI 193
>gi|77361279|ref|YP_340854.1| flagellar motor protein PomA [Pseudoalteromonas haloplanktis
TAC125]
gi|76876190|emb|CAI87412.1| Flagellar motor component (Chemotaxis motA protein)
[Pseudoalteromonas haloplanktis TAC125]
Length = 228
Score = 44.0 bits (103), Expect = 0.015, Method: Composition-based stats.
Identities = 13/85 (15%), Positives = 33/85 (38%), Gaps = 8/85 (9%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
D + + I+ + S+ +G++G ++G++ ++ +
Sbjct: 94 DVVRATLQKDISLTTARHESGATLFKSLGDIAPAMGMIGTLIGLVAMLSNM----DDPKA 149
Query: 171 SIPGIIESLISILLGLC----VSIP 191
P + +L++ L G V+IP
Sbjct: 150 IGPAMAVALLTTLYGAFLANVVAIP 174
>gi|308184600|ref|YP_003928733.1| flagellar motor protein MotA [Helicobacter pylori SJM180]
gi|308060520|gb|ADO02416.1| flagellar motor protein MotA [Helicobacter pylori SJM180]
Length = 257
Score = 44.0 bits (103), Expect = 0.015, Method: Composition-based stats.
Identities = 15/120 (12%), Positives = 43/120 (35%), Gaps = 5/120 (4%)
Query: 67 QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
++L + + + L ++ ++ ++ + ++++I E
Sbjct: 79 KNLVELATLARKDGVLSLEGRVAQIEDDFTRNGLSMIIDGKDLK-SVKESLEISIEEMEE 137
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGL 186
+ + +G++GAV+G+M Q + N GI + + + G+
Sbjct: 138 YYHGAAHYWETAGETAPTMGLVGAVMGLMLALQKL----DNPAEMAAGIAGAFTATVTGI 193
>gi|261839370|gb|ACX99135.1| flagellar motor protein MotA [Helicobacter pylori 52]
gi|297380014|gb|ADI34901.1| Chemotaxis protein motA [Helicobacter pylori v225d]
Length = 257
Score = 44.0 bits (103), Expect = 0.015, Method: Composition-based stats.
Identities = 15/120 (12%), Positives = 43/120 (35%), Gaps = 5/120 (4%)
Query: 67 QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
++L + + + L ++ ++ ++ + ++++I E
Sbjct: 79 KNLVELATLARKDGVLSLEGRVAQIEDDFTRNGLSMIIDGKDLK-SVKESLEISIEEMEE 137
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGL 186
+ + +G++GAV+G+M Q + N GI + + + G+
Sbjct: 138 YYHGAAHYWETAGETAPTMGLVGAVMGLMLALQKL----DNPAEMAAGIAGAFTATVTGI 193
>gi|284929798|ref|YP_003422320.1| Ferric siderophore transport system, biopolymer transport protein
ExbB [cyanobacterium UCYN-A]
gi|284810242|gb|ADB95939.1| Ferric siderophore transport system, biopolymer transport protein
ExbB [cyanobacterium UCYN-A]
Length = 222
Score = 44.0 bits (103), Expect = 0.015, Method: Composition-based stats.
Identities = 35/166 (21%), Positives = 69/166 (41%), Gaps = 18/166 (10%)
Query: 42 IIQKSVNFITLRRQFREFEQLFWSGQ--SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSC 99
II++S +I + ++ ++ + + K+ +NH + + +
Sbjct: 28 IIERSFFWIRFLSKEKQITKIILKTASYDWDAILKTSQNHSKHPICNFLYTPLK------ 81
Query: 100 DKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQ 159
+ P + ++ + EL + + L + + L+G+LG VLG++G
Sbjct: 82 ---LKDPDP--EVFHLALESSADDELALMRQGDKLLEGVIALSPLLGLLGTVLGLIGSLG 136
Query: 160 SIA----GYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIE 201
+I G S V++ GI E+LIS GL ++I S Y F
Sbjct: 137 NIQISDLGTSSTRGVTL-GIGEALISTAAGLIIAITSLTFYRIFQS 181
>gi|317177354|dbj|BAJ55143.1| flagellar motor protein MotA [Helicobacter pylori F16]
gi|317182127|dbj|BAJ59911.1| flagellar motor protein MotA [Helicobacter pylori F57]
Length = 257
Score = 44.0 bits (103), Expect = 0.015, Method: Composition-based stats.
Identities = 15/120 (12%), Positives = 43/120 (35%), Gaps = 5/120 (4%)
Query: 67 QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
++L + + + L ++ ++ ++ + ++++I E
Sbjct: 79 KNLVELATLARKDGVLSLEGRVAQIEDDFTRNGLSMIIDGKDLK-SVKESLEISIEEMEE 137
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGL 186
+ + +G++GAV+G+M Q + N GI + + + G+
Sbjct: 138 YYHGAAHYWETAGETAPTMGLVGAVMGLMLALQKL----DNPAEMAAGIAGAFTATVTGI 193
>gi|121997147|ref|YP_001001934.1| MotA/TolQ/ExbB proton channel [Halorhodospira halophila SL1]
gi|121588552|gb|ABM61132.1| MotA/TolQ/ExbB proton channel [Halorhodospira halophila SL1]
Length = 288
Score = 44.0 bits (103), Expect = 0.015, Method: Composition-based stats.
Identities = 15/102 (14%), Positives = 41/102 (40%), Gaps = 6/102 (5%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ + R++ + ++ SM G++G ++G++ ++ +
Sbjct: 140 ELVQRILREELELSMQRHEVGQRIFRSMGEQAPAFGMIGTLVGLVQMLGNL----EDPEA 195
Query: 171 SIPGIIESLISILLG-LCVSIPSS-IAYNKFIEDSKKFAMQM 210
PG+ +L++ L G L + + IA N + ++ +
Sbjct: 196 IGPGMAVALLTTLYGALFAQLVALPIADNLEVRAQQEHTNNL 237
>gi|258513970|ref|YP_003190192.1| MotA/TolQ/ExbB proton channel [Desulfotomaculum acetoxidans DSM
771]
gi|257777675|gb|ACV61569.1| MotA/TolQ/ExbB proton channel [Desulfotomaculum acetoxidans DSM
771]
Length = 260
Score = 44.0 bits (103), Expect = 0.015, Method: Composition-based stats.
Identities = 19/119 (15%), Positives = 42/119 (35%), Gaps = 5/119 (4%)
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
+ + + L S +E+ K + + + +M+ I E
Sbjct: 83 DLADQARREGLLYLEDQISSMDNEFLKKGIQLVIDGTEA-ELVRNIMETEIISLEERNEV 141
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVS 189
SF + +GI+G V+G++ ++ + P I + I+ L G+ +
Sbjct: 142 GASFFEAAGGFAPTMGIIGTVMGLVHVLGNM----DDPTTLGPKIAVAFIATLYGVASA 196
>gi|109947290|ref|YP_664518.1| flagellar motor protein MotA [Helicobacter acinonychis str. Sheeba]
gi|109714511|emb|CAJ99519.1| flagellar motor rotation protein MotA [Helicobacter acinonychis
str. Sheeba]
Length = 257
Score = 44.0 bits (103), Expect = 0.015, Method: Composition-based stats.
Identities = 15/120 (12%), Positives = 43/120 (35%), Gaps = 5/120 (4%)
Query: 67 QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
++L + + + L ++ ++ ++ + ++++I E
Sbjct: 79 KNLVELATLARKDGVLSLEGRVAQIEDDFTRNGLSMIIDGKDLK-SVKESLEISIEEMEE 137
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGL 186
+ + +G++GAV+G+M Q + N GI + + + G+
Sbjct: 138 YYHGAAHYWETAGETAPTMGLVGAVMGLMLALQKL----DNPAEMAAGIAGAFTATVTGI 193
>gi|328958205|ref|YP_004375591.1| flagellar motor protein MotA [Carnobacterium sp. 17-4]
gi|328674529|gb|AEB30575.1| flagellar motor protein MotA [Carnobacterium sp. 17-4]
Length = 268
Score = 44.0 bits (103), Expect = 0.016, Method: Composition-based stats.
Identities = 18/101 (17%), Positives = 39/101 (38%), Gaps = 5/101 (4%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ I +++ + E + S +GI+G VLG++ +A ++
Sbjct: 122 EMIRDTLELEMDAISERHKTGAAIFNSAGGTAPTMGIVGTVLGLVHVLGGLA--DADMSQ 179
Query: 171 SIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
I + ++ L GL + ++ + KK A + E
Sbjct: 180 LGASISSAFLATLYGLASA---NLVFLPIGTRLKKIAQKEE 217
>gi|126177994|ref|YP_001045959.1| MotA/TolQ/ExbB proton channel [Methanoculleus marisnigri JR1]
gi|125860788|gb|ABN55977.1| MotA/TolQ/ExbB proton channel [Methanoculleus marisnigri JR1]
Length = 206
Score = 44.0 bits (103), Expect = 0.016, Method: Composition-based stats.
Identities = 27/191 (14%), Positives = 65/191 (34%), Gaps = 23/191 (12%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQFR------EFEQLFWSGQSLETVCKSLKNHHN 81
I LL +F + + + + Q + R + +S ++L +
Sbjct: 24 IILLLVFVVWTLTALGQFISEYSGRTRNLEQLRDGCRETRALVQARSYGEAAETLATSGS 83
Query: 82 IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSA 141
L F +++ S +QD ++ IA ELE L ++
Sbjct: 84 NPLLRSFTGDLAKLLDDDRFSIESEKLLQDY-----EIRIAAELER-------LKILTRT 131
Query: 142 GLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIE 201
++G++G ++ + ++ + ++ + + +LGL IAY +
Sbjct: 132 APMLGLMGTLIPLGPALMGLSAGNVETL--ASNLVIAFSTTVLGLFAG---GIAYTIMLT 186
Query: 202 DSKKFAMQMEG 212
+ + +
Sbjct: 187 KRRWYLQDLSD 197
>gi|293391034|ref|ZP_06635368.1| TonB-system energizer ExbB [Aggregatibacter actinomycetemcomitans
D7S-1]
gi|290951568|gb|EFE01687.1| TonB-system energizer ExbB [Aggregatibacter actinomycetemcomitans
D7S-1]
Length = 99
Score = 44.0 bits (103), Expect = 0.017, Method: Composition-based stats.
Identities = 9/38 (23%), Positives = 19/38 (50%)
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYY 165
+ L+ + ++ + VG+LG V+G++ F I
Sbjct: 56 LNRNLTIVSTVGANAPYVGLLGTVIGILLTFYQIGQSG 93
>gi|330902553|gb|EGH33568.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. japonica
str. M301072PT]
Length = 88
Score = 44.0 bits (103), Expect = 0.017, Method: Composition-based stats.
Identities = 11/57 (19%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Query: 155 MGFFQSIAGYY-SNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQM 210
+ F+++A S+ GI +L + LG+ +++ + +N F + ++ Q+
Sbjct: 1 IDTFKALASAGVSDPGQISAGIGTALFATGLGIAIALFCVVFHNYFQDSLERINDQL 57
>gi|254974361|ref|ZP_05270833.1| putative chemotaxis protein [Clostridium difficile QCD-66c26]
gi|255091755|ref|ZP_05321233.1| putative chemotaxis protein [Clostridium difficile CIP 107932]
gi|255313485|ref|ZP_05355068.1| putative chemotaxis protein [Clostridium difficile QCD-76w55]
gi|255516173|ref|ZP_05383849.1| putative chemotaxis protein [Clostridium difficile QCD-97b34]
gi|255649269|ref|ZP_05396171.1| putative chemotaxis protein [Clostridium difficile QCD-37x79]
gi|260682441|ref|YP_003213726.1| putative chemotaxis protein [Clostridium difficile CD196]
gi|260686040|ref|YP_003217173.1| putative chemotaxis protein [Clostridium difficile R20291]
gi|306519370|ref|ZP_07405717.1| putative chemotaxis protein [Clostridium difficile QCD-32g58]
gi|260208604|emb|CBA61320.1| putative chemotaxis protein [Clostridium difficile CD196]
gi|260212056|emb|CBE02636.1| putative chemotaxis protein [Clostridium difficile R20291]
Length = 262
Score = 44.0 bits (103), Expect = 0.017, Method: Composition-based stats.
Identities = 15/77 (19%), Positives = 34/77 (44%), Gaps = 3/77 (3%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI 172
I +++ I + E ++ S +GI+G V+G++ +++ SN
Sbjct: 124 IRNILESQIQITSKRHKEGIAIFDSAGGYAPTLGIIGTVMGLVHILGNLS---SNPDALG 180
Query: 173 PGIIESLISILLGLCVS 189
P I + ++ L G+ +
Sbjct: 181 PQISVAFLATLYGVGSA 197
>gi|255099859|ref|ZP_05328836.1| putative chemotaxis protein [Clostridium difficile QCD-63q42]
gi|255305747|ref|ZP_05349919.1| putative chemotaxis protein [Clostridium difficile ATCC 43255]
Length = 262
Score = 44.0 bits (103), Expect = 0.018, Method: Composition-based stats.
Identities = 15/77 (19%), Positives = 34/77 (44%), Gaps = 3/77 (3%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI 172
I +++ I + E ++ S +GI+G V+G++ +++ SN
Sbjct: 124 IRNILESQIQITSKRHKEGIAIFDSAGGYAPTLGIIGTVMGLVHILGNLS---SNPDALG 180
Query: 173 PGIIESLISILLGLCVS 189
P I + ++ L G+ +
Sbjct: 181 PQISVAFLATLYGVGSA 197
>gi|54309284|ref|YP_130304.1| putative ExbB-like protein [Photobacterium profundum SS9]
gi|46913716|emb|CAG20502.1| putative ExbB-like protein [Photobacterium profundum SS9]
Length = 221
Score = 43.6 bits (102), Expect = 0.019, Method: Composition-based stats.
Identities = 30/190 (15%), Positives = 68/190 (35%), Gaps = 19/190 (10%)
Query: 29 TLLFIFSILSWSVIIQKSVNFI-----TLRRQFREFEQLFWSGQSLETVCKSLKNHHNIG 83
L I S L+ +++++ V + + + + L+ + LK +
Sbjct: 16 WPLLICSALTIMILLERCVQVLLCTGVGKTKINALLAKQYRDDSGLDDLASELKQQRPLL 75
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
+ AM + DK R + ++ ++ L L +
Sbjct: 76 YKGV---AMLISHRHFDKPLREDAAGI---------WLQQKRTQLRSGLRLLSLIGVITP 123
Query: 144 LVGILGAVLGMMGFFQSIAGYYS--NNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIE 201
L+G+LG VLG++ F+ IA G+ ++ + GL +++P+
Sbjct: 124 LLGLLGTVLGLIEMFKGIAATTGSVTPSDLADGLGLAMRTTAAGLIIALPAITGAQLLGL 183
Query: 202 DSKKFAMQME 211
+ + ++E
Sbjct: 184 WADQVTAKLE 193
>gi|325109022|ref|YP_004270090.1| MotA/TolQ/ExbB proton channel [Planctomyces brasiliensis DSM 5305]
gi|324969290|gb|ADY60068.1| MotA/TolQ/ExbB proton channel [Planctomyces brasiliensis DSM 5305]
Length = 258
Score = 43.6 bits (102), Expect = 0.020, Method: Composition-based stats.
Identities = 12/79 (15%), Positives = 33/79 (41%), Gaps = 4/79 (5%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ ++ ++ + S + ++ G++G ++G++ ++ +
Sbjct: 123 ELMEAVLRSEMEAVSSRHKTGKSLMETVGRYAPAFGMIGTLMGLIIMLGNM----DDPAA 178
Query: 171 SIPGIIESLISILLGLCVS 189
PG+ +LI+ L G VS
Sbjct: 179 IGPGMAVALITTLYGAMVS 197
>gi|218887299|ref|YP_002436620.1| MotA/TolQ/ExbB proton channel [Desulfovibrio vulgaris str.
'Miyazaki F']
gi|218758253|gb|ACL09152.1| MotA/TolQ/ExbB proton channel [Desulfovibrio vulgaris str.
'Miyazaki F']
Length = 252
Score = 43.6 bits (102), Expect = 0.020, Method: Composition-based stats.
Identities = 14/79 (17%), Positives = 38/79 (48%), Gaps = 4/79 (5%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
D I +M+ IA + + +++S +G++G ++G++ +S+ ++
Sbjct: 121 DAIREIMESEIAALETRHSMGVDIFNALASYAPALGLVGTLIGLVQMLRSM----NDPSA 176
Query: 171 SIPGIIESLISILLGLCVS 189
P + +LI+ G+ ++
Sbjct: 177 IGPAMAVALITTFYGVVLA 195
>gi|149178078|ref|ZP_01856674.1| hypothetical protein PM8797T_02354 [Planctomyces maris DSM 8797]
gi|148843135|gb|EDL57502.1| hypothetical protein PM8797T_02354 [Planctomyces maris DSM 8797]
Length = 224
Score = 43.6 bits (102), Expect = 0.020, Method: Composition-based stats.
Identities = 22/190 (11%), Positives = 59/190 (31%), Gaps = 20/190 (10%)
Query: 33 IFSILSWSVIIQKSVNFITLRRQFREF-----EQLFWSGQSLETVCKSLKNHHNIGLAAI 87
FS+ S S++ K ++ S +++TV ++ + +
Sbjct: 14 FFSLWSLSILFIKYRKLSLQKKSLAYIVVPSDASFVLSSTTVDTVIDNIYECVDDPRHFV 73
Query: 88 FMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGI 147
+ + +G +D ++ + + S L A ++G
Sbjct: 74 LFN-----RIIIALSNLRNLGRVTDVDEILRSQAVHDESSMETSYSLLSGFIWAIPVLGF 128
Query: 148 LGAVLGMMGFFQS----------IAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYN 197
+G VLG+ ++ ++ G+ + + L L ++ +
Sbjct: 129 IGTVLGLSQAIGGFGKVLQTSEELSQIKTSLQGVTGGLATAFETTLQALIAALFIQLILT 188
Query: 198 KFIEDSKKFA 207
+ ++F
Sbjct: 189 FLKKSEEEFL 198
>gi|258510422|ref|YP_003183856.1| MotA/TolQ/ExbB proton channel [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
gi|257477148|gb|ACV57467.1| MotA/TolQ/ExbB proton channel [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
Length = 265
Score = 43.6 bits (102), Expect = 0.021, Method: Composition-based stats.
Identities = 21/111 (18%), Positives = 44/111 (39%), Gaps = 5/111 (4%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ + M+ +A E ++ + +GI+G V+G++ S++ S
Sbjct: 122 ELVKDMLQTELAHIEERHEVGINMFEAAGGFAPTMGIIGTVMGLVHVLGSLSDVSS---- 177
Query: 171 SIPGIIESLISILLGLCVS-IPSSIAYNKFIEDSKKFAMQMEGFANEFSAI 220
P I + I+ L G+ + I NK S++ ++ E +I
Sbjct: 178 LGPEIATAFIATLYGVASANIFWLPVANKLRARSQEEMLEREMTLEGILSI 228
>gi|121533752|ref|ZP_01665579.1| MotA/TolQ/ExbB proton channel [Thermosinus carboxydivorans Nor1]
gi|121307743|gb|EAX48658.1| MotA/TolQ/ExbB proton channel [Thermosinus carboxydivorans Nor1]
Length = 260
Score = 43.6 bits (102), Expect = 0.021, Method: Composition-based stats.
Identities = 20/132 (15%), Positives = 51/132 (38%), Gaps = 6/132 (4%)
Query: 60 EQLFWSGQSLETVCKSLKNHHNIGLAAI--FMSAMSEWKKSCDKGARSPIGIQDRIDRMM 117
E+ + +GQ + T+ + GL A+ ++ + + + + +M
Sbjct: 69 EEKYDTGQLIATLVGFAEKARREGLLALEEDLAGIEDNFLQKGMQLVIDGTDAELVRSIM 128
Query: 118 DVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIE 177
+ + E + S + +GI+G V+G++ ++ ++ P I
Sbjct: 129 ETELTFIQERHHKAASIFETAGGYAPTMGIIGTVMGLVHVLGNL----TDTESLGPAIAT 184
Query: 178 SLISILLGLCVS 189
+ I+ L G+ +
Sbjct: 185 AFIATLYGVASA 196
>gi|302341788|ref|YP_003806317.1| MotA/TolQ/ExbB proton channel [Desulfarculus baarsii DSM 2075]
gi|301638401|gb|ADK83723.1| MotA/TolQ/ExbB proton channel [Desulfarculus baarsii DSM 2075]
Length = 279
Score = 43.6 bits (102), Expect = 0.021, Method: Composition-based stats.
Identities = 12/77 (15%), Positives = 32/77 (41%), Gaps = 4/77 (5%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI 172
I + ++ + L + + L M G+ G ++G++ ++ S+
Sbjct: 123 IAQRLEQEMDFFLARRESQRAVLSFMGRLAPAFGLAGTMIGLIRMLHTL----SDPTAVA 178
Query: 173 PGIIESLISILLGLCVS 189
G+ +L++ GL ++
Sbjct: 179 SGMSVALLTTFYGLMIA 195
>gi|269792935|ref|YP_003317839.1| MotA/TolQ/ExbB proton channel [Thermanaerovibrio acidaminovorans
DSM 6589]
gi|269100570|gb|ACZ19557.1| MotA/TolQ/ExbB proton channel [Thermanaerovibrio acidaminovorans
DSM 6589]
Length = 262
Score = 43.6 bits (102), Expect = 0.022, Method: Composition-based stats.
Identities = 20/153 (13%), Positives = 56/153 (36%), Gaps = 15/153 (9%)
Query: 43 IQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKG 102
I+++ + R+ F L + ++L + ++ + + D
Sbjct: 52 IERTKALPKIIRKA-----FFNDPIDLPGLIQTLVSFAEKARWEGLLALEEDAAQLDDPF 106
Query: 103 ARSPIGIQ------DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMG 156
+ I + + + ++D I E ++ +M+ G+LG ++G++
Sbjct: 107 LKKSIQLVVDGTDPELVKSILDTEIGLLEERHGAGKAYFDTMAELAPAFGMLGTLIGLIL 166
Query: 157 FFQSIAGYYSNNVVSIPGIIESLISILLGLCVS 189
++ + PG+ +LI+ G ++
Sbjct: 167 MLGNL----DDPDALGPGMATALITTFYGSFIA 195
>gi|262194415|ref|YP_003265624.1| hypothetical protein Hoch_1161 [Haliangium ochraceum DSM 14365]
gi|262077762|gb|ACY13731.1| hypothetical protein Hoch_1161 [Haliangium ochraceum DSM 14365]
Length = 430
Score = 43.6 bits (102), Expect = 0.022, Method: Composition-based stats.
Identities = 28/216 (12%), Positives = 66/216 (30%), Gaps = 20/216 (9%)
Query: 19 QMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKN 78
L + + T + + +V++ K + + R + R SL V
Sbjct: 67 AGDLVGRSVPTAILFLFFWTLAVLLWKGLRILRERSRLRHPLLA-----SLPEVMAREGA 121
Query: 79 HHNIGLAAIFMS----AMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSF 134
A ++ ++ + + G R + +
Sbjct: 122 AAAYASLAPRLAKRRPGLAATQLAKLIQLLRTSGDARRAHDSFRHQAQIAADTAAGSYTM 181
Query: 135 LGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV-----------SIPGIIESLISIL 183
A ++G +G VLG+ + AG+ + ++ G+ + + L
Sbjct: 182 TRVFIWAMPILGFIGTVLGIGLSVGAFAGFLTGDIDDIELVKSELSKIAGGLAFAFDTTL 241
Query: 184 LGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
+GL S+ + A + + F +E + +
Sbjct: 242 IGLVGSLLAMFATSFVQSADESFHTALEKLGVDVVS 277
>gi|182418693|ref|ZP_02626763.2| chemotaxis protein MotA [Clostridium butyricum 5521]
gi|237669679|ref|ZP_04529656.1| chemotaxis protein MotA [Clostridium butyricum E4 str. BoNT E
BL5262]
gi|182377470|gb|EDT75025.1| chemotaxis protein MotA [Clostridium butyricum 5521]
gi|237654753|gb|EEP52316.1| putative chemotaxis protein MotA [Clostridium butyricum E4 str.
BoNT E BL5262]
Length = 260
Score = 43.6 bits (102), Expect = 0.022, Method: Composition-based stats.
Identities = 19/143 (13%), Positives = 56/143 (39%), Gaps = 9/143 (6%)
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDR--IDRMMDVAIARELE 126
+E + + + GL ++ + + KG + + I ++++ I E
Sbjct: 79 IEQLIEMSQRTRRDGLLSLEGTIQGLDNRFMKKGLEMVVDGMESDIIKEVLEIEIESMEE 138
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGL 186
+ + +G+LGAV+G++G ++ ++ I + ++ + G+
Sbjct: 139 RHRLGATVFSTAGGTAPTLGVLGAVIGLIGALGNL----NDIDKLGESISSAFVATVYGI 194
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQ 209
+ ++ F K+ +++
Sbjct: 195 FCG---YLIFHPFSNRLKRKSLE 214
>gi|59711831|ref|YP_204607.1| TonB system transport protein ExbB1 [Vibrio fischeri ES114]
gi|59479932|gb|AAW85719.1| TonB system transport protein ExbB1 [Vibrio fischeri ES114]
Length = 227
Score = 43.6 bits (102), Expect = 0.022, Method: Composition-based stats.
Identities = 33/210 (15%), Positives = 88/210 (41%), Gaps = 26/210 (12%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
++ L+ Q+G+ L S+L+ ++++++++ L +SG S +
Sbjct: 2 LNFSHLYSQLGIMA----LPLLGCSLLTLALLLERTIQL------------LLFSGCSHK 45
Query: 71 TVCKSLKNHHNIGLAAI--FMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIA-----R 123
+ +L I F+ + + + KG + +D ++ + +A
Sbjct: 46 KIQSTLNQLEKDDTQGIHSFIQELKKRRALSAKGNAMLLAHRDF-EKGLREDVAGLWLQE 104
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV--VSIPGIIESLIS 181
+ ++ L L + L+G+LG VLG++ F+ +A + + G+ ++ +
Sbjct: 105 KRHQLRSGLRLLALIGMISPLLGLLGTVLGLIDMFKDVAATTGSITPNILADGLGLAMRT 164
Query: 182 ILLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
+GL +++P+ + + + ++E
Sbjct: 165 TAIGLIIALPAIASSQLLGLWADRILSRLE 194
>gi|220932515|ref|YP_002509423.1| MotA/TolQ/ExbB proton channel [Halothermothrix orenii H 168]
gi|219993825|gb|ACL70428.1| MotA/TolQ/ExbB proton channel [Halothermothrix orenii H 168]
Length = 267
Score = 43.6 bits (102), Expect = 0.022, Method: Composition-based stats.
Identities = 11/94 (11%), Positives = 37/94 (39%), Gaps = 7/94 (7%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ + +++ + E + +M G++G ++G++ + +
Sbjct: 121 ELVRNILETKLTFLEERHQKGRGLFSTMGQLAPSFGLIGTLIGLIQMLSQL----DDPTN 176
Query: 171 SIPGIIESLISILLGLCVSIPSSIAYNKFIEDSK 204
G+ +LI+ L G ++ +++ +N +
Sbjct: 177 LGSGMAVALITTLYG---ALLANLLFNPLAGKLR 207
>gi|209964121|ref|YP_002297036.1| chemotaxis MotA protein [Rhodospirillum centenum SW]
gi|7025358|gb|AAF35848.1|AF220003_2 polar flagellar motor protein MopA [Rhodospirillum centenum]
gi|209957587|gb|ACI98223.1| chemotaxis MotA protein [Rhodospirillum centenum SW]
Length = 301
Score = 43.6 bits (102), Expect = 0.023, Method: Composition-based stats.
Identities = 13/115 (11%), Positives = 40/115 (34%), Gaps = 4/115 (3%)
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
+ + + + L + S +E D ++R++ I +
Sbjct: 128 QLADIARRNGPLALQPLAPSLAAEPVLQRSIEMIVDGLPADDVERILRTEIEADQARARA 187
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLG 185
+ L + +G++G ++G++ ++ + P + +L++ G
Sbjct: 188 GAAVLRRAAEVAPAMGLIGTLVGLVQMLDNL----QDPASIGPAMAVALLTTFYG 238
>gi|212636712|ref|YP_002313237.1| MotA/TolQ/ExbB proton channel [Shewanella piezotolerans WP3]
gi|212558196|gb|ACJ30650.1| MotA/TolQ/ExbB proton channel [Shewanella piezotolerans WP3]
Length = 255
Score = 43.6 bits (102), Expect = 0.024, Method: Composition-based stats.
Identities = 27/179 (15%), Positives = 66/179 (36%), Gaps = 8/179 (4%)
Query: 29 TLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIF 88
LFI + L+ +I+++ + + ++ W Q L +S L
Sbjct: 30 WPLFICAFLALMIILERLALML-----YELPKRDGWLAQ-LRQQARSATPEQRQQLTTQI 83
Query: 89 MSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGIL 148
S K ++ + ++ + + ++ + L L + L+G+L
Sbjct: 84 SQGRSMLAKGTALLLSHSDQSREMREEIVSLWLVKQKGRLLSGLKILQIIGIITPLLGLL 143
Query: 149 GAVLGMMGFFQSIAGYYS--NNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKK 205
G VLG++ F + G+ ++ + GL +++P+ + F +++
Sbjct: 144 GTVLGLIEMFNQLGLSDGPVTPSELASGLGLAMNTTAAGLIIAVPAITMAHLFTLWAER 202
>gi|257457609|ref|ZP_05622776.1| motility protein A [Treponema vincentii ATCC 35580]
gi|257444995|gb|EEV20071.1| motility protein A [Treponema vincentii ATCC 35580]
Length = 259
Score = 43.3 bits (101), Expect = 0.024, Method: Composition-based stats.
Identities = 29/149 (19%), Positives = 58/149 (38%), Gaps = 13/149 (8%)
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDR--IDRMMDVAIARELEE 127
+ + + GL A+ G R+ I D I M+ + + E
Sbjct: 78 QKLVALSEKSRRTGLLALEEEIQDFEDDFLRTGLRNVIDGIDGAAIRVSMENELTQMEER 137
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLG-- 185
+ +S + + ++ G+LG V+G++G +I + P + +L++ G
Sbjct: 138 HNKWISLINAWATLAPGFGMLGTVIGLIGMLLNI----EDKSSLGPNMAVALVTTFYGSM 193
Query: 186 ----LCVSIPSSIAY-NKFIEDSKKFAMQ 209
L + I S +AY N SK+ ++
Sbjct: 194 MANWLLIPIASKLAYQNNLEVRSKEMIIE 222
>gi|306820124|ref|ZP_07453772.1| chemotaxis protein MotA [Eubacterium yurii subsp. margaretiae ATCC
43715]
gi|304551902|gb|EFM39845.1| chemotaxis protein MotA [Eubacterium yurii subsp. margaretiae ATCC
43715]
Length = 258
Score = 43.3 bits (101), Expect = 0.025, Method: Composition-based stats.
Identities = 20/140 (14%), Positives = 56/140 (40%), Gaps = 9/140 (6%)
Query: 66 GQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDR--IDRMMDVAIAR 123
+++E++ + GL ++ +A KG + D + +++ +
Sbjct: 75 SKTIESLIELANKARKDGLLSLEEAARDMGDPFLQKGLMLIVDGTDPELVRNLLETELDF 134
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISIL 183
+ + ++S G G++G + G++ ++++ S P + +LI+ L
Sbjct: 135 IEQRHKNGQGLMEMIASMGPGFGMIGTLFGLVAMLKNLSDTAS----LGPNMAVALITTL 190
Query: 184 LGLCVSIPSSIAYNKFIEDS 203
G SI +++ + +
Sbjct: 191 YG---SILANVFFTPMAKKL 207
>gi|253575921|ref|ZP_04853255.1| MotA/TolQ/ExbB proton channel [Paenibacillus sp. oral taxon 786
str. D14]
gi|251844715|gb|EES72729.1| MotA/TolQ/ExbB proton channel [Paenibacillus sp. oral taxon 786
str. D14]
Length = 278
Score = 43.3 bits (101), Expect = 0.026, Method: Composition-based stats.
Identities = 21/123 (17%), Positives = 46/123 (37%), Gaps = 6/123 (4%)
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDR--IDRMMDVAIARELE 126
+E + + G+ A+ A +G + + DR + ++M++ I +
Sbjct: 78 IEDIVEMSSTSRREGVLALEKKAAEHRDPFLREGIQLVVDGTDRAMVRQIMELEIDAVSK 137
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGL 186
+ S +GI+G V+G++ S+ S P I + + L G+
Sbjct: 138 KYDGYAKIFESAGGYAPTMGIIGTVMGLIHVLGSL----SEPTALGPSIALAFTATLYGV 193
Query: 187 CVS 189
+
Sbjct: 194 ASA 196
>gi|126173194|ref|YP_001049343.1| MotA/TolQ/ExbB proton channel [Shewanella baltica OS155]
gi|125996399|gb|ABN60474.1| MotA/TolQ/ExbB proton channel [Shewanella baltica OS155]
Length = 251
Score = 43.3 bits (101), Expect = 0.026, Method: Composition-based stats.
Identities = 30/196 (15%), Positives = 73/196 (37%), Gaps = 9/196 (4%)
Query: 6 LAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS 65
+ I D S Q+G+ L + + L+ + +++S F+ ++ W
Sbjct: 1 MPITDFSTLQ--TQLGVLT----WPLLLCAFLALMICLERSALFLHQTLLSIWPKKQAW- 53
Query: 66 GQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
SL + + L A + + + + + ++ + + ++
Sbjct: 54 VTSLRQSRSTATTENVSALLAQTSAQQDLLARGATLLLKQVHQPKVLREELLSLWLNKQQ 113
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYS--NNVVSIPGIIESLISIL 183
++ L L + L+G+LG VLG++ F + G+ ++ +
Sbjct: 114 RDLQAGLKVLQVIGIISPLLGLLGTVLGLIDMFAQLGQSQGPVTPAQLSAGLGLAMNTTA 173
Query: 184 LGLCVSIPSSIAYNKF 199
GL +++P+ A + F
Sbjct: 174 AGLIIAVPAITAAHLF 189
>gi|90423603|ref|YP_531973.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris BisB18]
gi|90105617|gb|ABD87654.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris BisB18]
Length = 257
Score = 43.3 bits (101), Expect = 0.026, Method: Composition-based stats.
Identities = 21/126 (16%), Positives = 45/126 (35%), Gaps = 5/126 (3%)
Query: 65 SGQSL-ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAR 123
S + L E + + + G + E + + + I M+
Sbjct: 73 SARDLVEELARIAEIARKSGPVGLEKVETDEPFLAKGIRYVADGYDLEFIRDNMERDRDN 132
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISIL 183
L + E ++ G++G +LGM+ F ++ S+ P + +L++ L
Sbjct: 133 FLLHLNEGSKIYRAIGDCAPAFGMIGTLLGMVQMFSNM----SDPSKLGPFMAVALLATL 188
Query: 184 LGLCVS 189
G V+
Sbjct: 189 YGALVA 194
>gi|197334460|ref|YP_002156025.1| TolQ protein [Vibrio fischeri MJ11]
gi|197315950|gb|ACH65397.1| TolQ protein [Vibrio fischeri MJ11]
Length = 227
Score = 43.3 bits (101), Expect = 0.027, Method: Composition-based stats.
Identities = 33/210 (15%), Positives = 88/210 (41%), Gaps = 26/210 (12%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
++ L+ Q+G+ L S+L+ ++++++++ L +SG S +
Sbjct: 2 LNFSHLYSQLGIMA----LPLLGCSLLTLALLLERTIQL------------LLFSGCSHK 45
Query: 71 TVCKSLKNHHNIGLAAI--FMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIA-----R 123
+ +L I F+ + + + KG + +D ++ + +A
Sbjct: 46 KIQSTLSQLEKDDAQGIHSFIQELKKRRALSAKGNAMLLAHRDF-EKGLREDVAGLWLQE 104
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV--VSIPGIIESLIS 181
+ ++ L L + L+G+LG VLG++ F+ +A + + G+ ++ +
Sbjct: 105 KRHQLRSGLRLLALIGMISPLLGLLGTVLGLIDMFKDVAATTGSITPNILADGLGLAMRT 164
Query: 182 ILLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
+GL +++P+ + + + ++E
Sbjct: 165 TAIGLIIALPAIASSQLLGLWADRILSRLE 194
>gi|296121067|ref|YP_003628845.1| hypothetical protein Plim_0801 [Planctomyces limnophilus DSM 3776]
gi|296013407|gb|ADG66646.1| hypothetical protein Plim_0801 [Planctomyces limnophilus DSM 3776]
Length = 233
Score = 43.3 bits (101), Expect = 0.027, Method: Composition-based stats.
Identities = 36/208 (17%), Positives = 71/208 (34%), Gaps = 18/208 (8%)
Query: 20 MGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNH 79
G AV ++ L++ W+ + + + +F F + +S+ SL +
Sbjct: 19 AGAAVVHVLIFLYL---WVWA-----NRDLKRISAEFERFTRGLDH-RSVLEPYSSLSDQ 69
Query: 80 HNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMS 139
+ LA + + +K+ + + D R + L + SM
Sbjct: 70 IDAFLADVRDVLENPLRKTERRLLLDRLVTLDEHRRYLQSQSFETLYNVAR------SMI 123
Query: 140 SAGLLVGILGAVLGMMGFFQSIAG--YYSNNVVSIPGIIESLISILLGLCVSIPSSIAYN 197
A + G+LG ++ + Q G + S+ S GL +I +
Sbjct: 124 EAYPMAGVLGTIIAIGCALQQSPGEDGRQTIQAIVQFFGNSIWSTFAGLLAAILLMFINS 183
Query: 198 KFIEDSKKFAMQMEGFANEFSAILSRQT 225
F ++ A FA E A+ R+
Sbjct: 184 LFETKFRRLAEN-RTFARETVAMARREL 210
>gi|254785496|ref|YP_003072925.1| flagellar motor protein [Teredinibacter turnerae T7901]
gi|237683897|gb|ACR11161.1| transporter, MotA/TolQ/ExbB proton channel family [Teredinibacter
turnerae T7901]
Length = 246
Score = 43.3 bits (101), Expect = 0.027, Method: Composition-based stats.
Identities = 27/116 (23%), Positives = 51/116 (43%), Gaps = 6/116 (5%)
Query: 76 LKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQD--RIDRMMDVAIARELEEITEKLS 133
K+ GL + A E K C KG + + + I +++ + + +E +
Sbjct: 85 AKSARRDGLLGLENIAERERDKFCRKGLQLLVDGSEPEVIRHVLETDLIVAEQRDSEAVQ 144
Query: 134 FLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVS 189
F SM +GI+GAV+G++ Q + SN PGI + ++ + G+ +
Sbjct: 145 FYESMGGYAPTIGIIGAVMGLIHVMQHL----SNPAELGPGIAIAFVATIYGVAFA 196
>gi|311069472|ref|YP_003974395.1| flagellar motor protein MotP [Bacillus atrophaeus 1942]
gi|310869989|gb|ADP33464.1| flagellar motor protein MotP [Bacillus atrophaeus 1942]
Length = 273
Score = 43.3 bits (101), Expect = 0.027, Method: Composition-based stats.
Identities = 18/109 (16%), Positives = 47/109 (43%), Gaps = 8/109 (7%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
++ I +MD IA E + L G++G ++G++ +++ ++
Sbjct: 126 EETIRLVMDSEIAAMEERHRKGRRVLEKAGEFAPAWGMIGTLVGLVLMLKNL----NDPG 181
Query: 170 VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFS 218
+ P + +L++ L G S+ +++ +N ++ + E F +
Sbjct: 182 MLGPNMAVALLTTLYG---SLLANMVFNPIAAKLEE-KTESEIFTKQLM 226
>gi|169836888|ref|ZP_02870076.1| TonB-system energizer ExbB [candidate division TM7 single-cell
isolate TM7a]
Length = 58
Score = 43.3 bits (101), Expect = 0.027, Method: Composition-based stats.
Identities = 13/54 (24%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Query: 159 QSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEG 212
+AG + + G+ +L + LGL V+IP+ + YN F+ + +
Sbjct: 1 MGMAGGIDTKAIMV-GLSLALKATALGLLVAIPTLMLYNAFMRKVDILINRYKA 53
>gi|90410565|ref|ZP_01218581.1| putative ExbB-like protein [Photobacterium profundum 3TCK]
gi|90328806|gb|EAS45090.1| putative ExbB-like protein [Photobacterium profundum 3TCK]
Length = 247
Score = 43.3 bits (101), Expect = 0.028, Method: Composition-based stats.
Identities = 29/192 (15%), Positives = 66/192 (34%), Gaps = 22/192 (11%)
Query: 29 TLLFIFSILSWSVIIQKSVNFI-----TLRRQFREFEQLFWSGQS-LETVCKSLKNHHNI 82
L I S L+ +++++ V + + + + S L+ + LK +
Sbjct: 16 WPLLICSALTIMILLERCVQVLLCTGVGKTKINALLAKQYRDDDSGLDELASELKQQRPL 75
Query: 83 GLAAIFM-SAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSA 141
+ M + + K + A Q R + + +
Sbjct: 76 LYKGVAMLISHRHFDKPLREDAAGIWLQQKRTQLRSGLRLLSL-------------IGVI 122
Query: 142 GLLVGILGAVLGMMGFFQSIAGYYS--NNVVSIPGIIESLISILLGLCVSIPSSIAYNKF 199
L+G+LG VLG++ F+ IA G+ ++ + GL +++P+
Sbjct: 123 TPLLGLLGTVLGLIEMFKGIAATSGSVTPSDLADGLGLAMRTTAAGLIIALPAITGAQLL 182
Query: 200 IEDSKKFAMQME 211
+ + ++E
Sbjct: 183 GLWADQVTAKLE 194
>gi|126698324|ref|YP_001087221.1| putative chemotaxis protein [Clostridium difficile 630]
gi|115249761|emb|CAJ67578.1| putative MotA/TolQ/ExbB proton channel [Clostridium difficile]
Length = 262
Score = 43.3 bits (101), Expect = 0.028, Method: Composition-based stats.
Identities = 15/77 (19%), Positives = 34/77 (44%), Gaps = 3/77 (3%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI 172
I +++ I + E ++ S +GI+G V+G++ +++ SN
Sbjct: 124 IRNILESQIQITSKRHKEGIAIFDSSGGYAPTLGIIGTVMGLVHILGNLS---SNPDALG 180
Query: 173 PGIIESLISILLGLCVS 189
P I + ++ L G+ +
Sbjct: 181 PQISVAFLATLYGVGSA 197
>gi|95929858|ref|ZP_01312599.1| MotA/TolQ/ExbB proton channel [Desulfuromonas acetoxidans DSM 684]
gi|95134154|gb|EAT15812.1| MotA/TolQ/ExbB proton channel [Desulfuromonas acetoxidans DSM 684]
Length = 255
Score = 43.3 bits (101), Expect = 0.028, Method: Composition-based stats.
Identities = 11/79 (13%), Positives = 33/79 (41%), Gaps = 4/79 (5%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ + MM+ + E +M++ +G++G ++G++ Q++ +
Sbjct: 121 EALRDMMERELEYVQERHETGADIFTTMAAYAPAMGMIGTLIGLVQMLQTM----DDPSS 176
Query: 171 SIPGIIESLISILLGLCVS 189
P + +L++ G +
Sbjct: 177 IGPAMAVALLTTFYGAVAA 195
>gi|225181602|ref|ZP_03735043.1| MotA/TolQ/ExbB proton channel [Dethiobacter alkaliphilus AHT 1]
gi|225167710|gb|EEG76520.1| MotA/TolQ/ExbB proton channel [Dethiobacter alkaliphilus AHT 1]
Length = 275
Score = 43.3 bits (101), Expect = 0.029, Method: Composition-based stats.
Identities = 18/114 (15%), Positives = 42/114 (36%), Gaps = 11/114 (9%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ I +MD I + + + G++G ++G++ ++ +
Sbjct: 125 ELIRDIMDTEITATVARHRMGQDLFKTWGALAPAFGMIGTLIGLIQMLANL----DDPSA 180
Query: 171 SIPGIIESLISILLGLCVSIPSSIAYN----KFIEDSKKFAMQMEGFANEFSAI 220
PG+ +L++ G ++ +++ +N K S Q E AI
Sbjct: 181 IGPGMAVALLTTFYG---ALLANLLFNPLAGKLAIRSDAEIAQKEAVVEGVLAI 231
>gi|192359153|ref|YP_001982601.1| flagellar motor protein [Cellvibrio japonicus Ueda107]
gi|190685318|gb|ACE82996.1| transporter, MotA/TolQ/ExbB proton channel family [Cellvibrio
japonicus Ueda107]
Length = 248
Score = 43.3 bits (101), Expect = 0.029, Method: Composition-based stats.
Identities = 22/122 (18%), Positives = 52/122 (42%), Gaps = 6/122 (4%)
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQD--RIDRMMDVAIARELEE 127
+ + GL + + E K KG + + + I R+++ + + +
Sbjct: 79 NNISRWAAAARKDGLLGLESVSEREKDKFAKKGLQLLVDGNEPEVIRRVLETDMIVDEQR 138
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLC 187
+ + F SM +GI+GAV+G++ ++A + PGI + ++ + G+
Sbjct: 139 DLDAIKFYESMGGYAPTIGIIGAVMGLIHVMNNLA----DPSTLGPGIAVAFVATIYGVA 194
Query: 188 VS 189
++
Sbjct: 195 LA 196
>gi|148260893|ref|YP_001235020.1| flagellar motor protein MotA [Acidiphilium cryptum JF-5]
gi|146402574|gb|ABQ31101.1| MotA/TolQ/ExbB proton channel [Acidiphilium cryptum JF-5]
Length = 286
Score = 43.3 bits (101), Expect = 0.029, Method: Composition-based stats.
Identities = 27/141 (19%), Positives = 52/141 (36%), Gaps = 10/141 (7%)
Query: 88 FMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGI 147
+ + ++ + A P I+D + R + +A EL L +M+ +GI
Sbjct: 121 ATAIICDYLRMVGMNADDPHQIEDVMARELRKTLAEELH----GAHTLQTMADGLPALGI 176
Query: 148 LGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFA 207
+ AVLG++ I+ V I E+L LG+ ++ + +
Sbjct: 177 VAAVLGVIKTMAHIS---QPPAVLGEMIGEALTGTFLGVLLAY-GVVG--PLSVRLRGVV 230
Query: 208 MQMEGFANEFSAILSRQTEGN 228
+ + A+L GN
Sbjct: 231 EEDSRYFEVIRAVLVAHLHGN 251
>gi|326404290|ref|YP_004284372.1| chemotaxis protein MotA [Acidiphilium multivorum AIU301]
gi|325051152|dbj|BAJ81490.1| chemotaxis protein MotA [Acidiphilium multivorum AIU301]
Length = 289
Score = 43.3 bits (101), Expect = 0.030, Method: Composition-based stats.
Identities = 27/141 (19%), Positives = 52/141 (36%), Gaps = 10/141 (7%)
Query: 88 FMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGI 147
+ + ++ + A P I+D + R + +A EL L +M+ +GI
Sbjct: 124 ATAIICDYLRMVGMNADDPHQIEDVMARELRKTLAEELH----GAHTLQTMADGLPALGI 179
Query: 148 LGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFA 207
+ AVLG++ I+ V I E+L LG+ ++ + +
Sbjct: 180 VAAVLGVIKTMAHIS---QPPAVLGEMIGEALTGTFLGVLLAY-GVVG--PLSVRLRGVV 233
Query: 208 MQMEGFANEFSAILSRQTEGN 228
+ + A+L GN
Sbjct: 234 EEDSRYFEVIRAVLVAHLHGN 254
>gi|83591880|ref|YP_425632.1| MotA/TolQ/ExbB proton channel [Rhodospirillum rubrum ATCC 11170]
gi|83574794|gb|ABC21345.1| MotA/TolQ/ExbB proton channel [Rhodospirillum rubrum ATCC 11170]
Length = 272
Score = 43.3 bits (101), Expect = 0.030, Method: Composition-based stats.
Identities = 12/97 (12%), Positives = 39/97 (40%), Gaps = 7/97 (7%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI 172
++ ++ I + + S L + +G++G ++G++ ++ +N V
Sbjct: 141 VEAILAQDIHATQQRLARATSVLRRAAEVAPAMGLIGTLIGLVQMLGNL----NNPAVIG 196
Query: 173 PGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQ 209
P + +L++ G +I ++ + ++
Sbjct: 197 PSMAVALLTTFYG---AIMGNVVFLPLAGKLERNGAD 230
>gi|325290745|ref|YP_004266926.1| MotA/TolQ/ExbB proton channel [Syntrophobotulus glycolicus DSM
8271]
gi|324966146|gb|ADY56925.1| MotA/TolQ/ExbB proton channel [Syntrophobotulus glycolicus DSM
8271]
Length = 259
Score = 43.3 bits (101), Expect = 0.030, Method: Composition-based stats.
Identities = 19/115 (16%), Positives = 42/115 (36%), Gaps = 5/115 (4%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ +++ I+ SF + +GI+G V+G++ ++ ++
Sbjct: 122 EITRSILESNISVLENRHKVGTSFFEAAGGFAPTMGIIGTVMGLIQVLGNL----TDPDS 177
Query: 171 SIPGIIESLISILLGLCVS-IPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
I + + L G+ + I NK +K ME + +I S +
Sbjct: 178 LSASIAAAFTATLYGVASANIMFLPIANKLKSKNKSEVETMEMIMDGIISIQSGE 232
>gi|294495835|ref|YP_003542328.1| MotA/TolQ/ExbB proton channel [Methanohalophilus mahii DSM 5219]
gi|292666834|gb|ADE36683.1| MotA/TolQ/ExbB proton channel [Methanohalophilus mahii DSM 5219]
Length = 207
Score = 43.3 bits (101), Expect = 0.030, Method: Composition-based stats.
Identities = 19/148 (12%), Positives = 47/148 (31%), Gaps = 18/148 (12%)
Query: 65 SGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARE 124
+ L L F + + S D + +V
Sbjct: 66 KSSDFDFAATHLGELKQNSLVMSFA------RDAAAHLGSSAATSIDWLSEEYEV----- 114
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILL 184
+T+ L + +S+ ++G++G ++ + +A N + ++ + + +L
Sbjct: 115 --RMTKNLEYTKILSTVAPMIGLMGTLIPLGPALIGLAEG--NILQLAHNLMVAFATTVL 170
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEG 212
GL I + Y + + + M
Sbjct: 171 GLFAGI---VGYVLTVVRKRWYWQDMAD 195
>gi|54308003|ref|YP_129023.1| flagellar motor protein PomA [Photobacterium profundum SS9]
gi|46912429|emb|CAG19221.1| putative sodium-driven polar flagellar protein MotA [Photobacterium
profundum SS9]
Length = 253
Score = 43.3 bits (101), Expect = 0.030, Method: Composition-based stats.
Identities = 26/185 (14%), Positives = 62/185 (33%), Gaps = 18/185 (9%)
Query: 14 FALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVN--FITLRRQFREFEQLFWSGQSL-E 70
+F V ++ +L S + V+I+ S++ F + + F + + L
Sbjct: 26 LGMF----FDVPSVLIVLGGTSFV---VLIKYSISQFFGAAKIAVKAFMFKTDNPEDLIA 78
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
+ + G A+ + D + + I E +
Sbjct: 79 KIVEMADAARKGGFLALEEMEVDNSFLRKGIDLLVDGHDADVVRATLQKDIGLTNERHEK 138
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLC--- 187
+ S +G++G ++G++ ++ + P + +L++ L G
Sbjct: 139 GVGIFSSFGDVAPAMGMIGTLIGLVAMLSNM----DDPKSIGPAMAVALLTTLYGSILAN 194
Query: 188 -VSIP 191
V+IP
Sbjct: 195 MVAIP 199
>gi|149178719|ref|ZP_01857302.1| chemotaxis pomA protein [Planctomyces maris DSM 8797]
gi|148842417|gb|EDL56797.1| chemotaxis pomA protein [Planctomyces maris DSM 8797]
Length = 259
Score = 43.3 bits (101), Expect = 0.031, Method: Composition-based stats.
Identities = 13/79 (16%), Positives = 34/79 (43%), Gaps = 4/79 (5%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
D +++++ + S + ++ G++G ++G++ ++ +
Sbjct: 123 DLMEQILRTEMEAVAGRHKNGKSLMDTVGRYAPAFGMIGTLMGLIIMLGNM----DDPEA 178
Query: 171 SIPGIIESLISILLGLCVS 189
PG+ +LI+ L G VS
Sbjct: 179 IGPGMAVALITTLYGALVS 197
>gi|197120113|ref|YP_002140540.1| chemotaxis protein MotA [Geobacter bemidjiensis Bem]
gi|197089473|gb|ACH40744.1| chemotaxis MotA protein [Geobacter bemidjiensis Bem]
Length = 254
Score = 43.3 bits (101), Expect = 0.031, Method: Composition-based stats.
Identities = 21/109 (19%), Positives = 39/109 (35%), Gaps = 5/109 (4%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI 172
+ M++ + S +GI+GAVLG++ ++ S+
Sbjct: 124 LRETMEIELGSFEAHAKGSAEVFESAGGFAPTIGIIGAVLGLIHVMSNL----SDPSKLG 179
Query: 173 PGIIESLISILLGLCVS-IPSSIAYNKFIEDSKKFAMQMEGFANEFSAI 220
GI + ++ + GL + I K K+ +Q E AI
Sbjct: 180 GGIAVAFVATIYGLMTANIFCIPFGTKLKHRLKEELLQKEMVIEGLIAI 228
>gi|222053742|ref|YP_002536104.1| MotA/TolQ/ExbB proton channel [Geobacter sp. FRC-32]
gi|221563031|gb|ACM19003.1| MotA/TolQ/ExbB proton channel [Geobacter sp. FRC-32]
Length = 256
Score = 42.9 bits (100), Expect = 0.032, Method: Composition-based stats.
Identities = 21/109 (19%), Positives = 41/109 (37%), Gaps = 5/109 (4%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI 172
+ M++ + E + +GI+GAVLG++ ++ S++
Sbjct: 124 LRETMEIELNSFEEHAKASAEVFEAAGGFAPTIGIIGAVLGLIHVMNNL----SDSSKLG 179
Query: 173 PGIIESLISILLGLCVS-IPSSIAYNKFIEDSKKFAMQMEGFANEFSAI 220
GI + ++ + GL + I K K+ +Q E AI
Sbjct: 180 AGIAVAFVATIYGLMTANIICIPISTKLKLRLKEAILQKEMVIEGLIAI 228
>gi|91976555|ref|YP_569214.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris BisB5]
gi|91683011|gb|ABE39313.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris BisB5]
Length = 257
Score = 42.9 bits (100), Expect = 0.032, Method: Composition-based stats.
Identities = 19/126 (15%), Positives = 45/126 (35%), Gaps = 5/126 (3%)
Query: 65 SGQSL-ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAR 123
S + L + + + + G + E + + + I ++
Sbjct: 73 SARDLVDELARIAEIARKSGPVGLEKVETDEPFLAKGIRYVADGYDLEFIRDNLERDRDN 132
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISIL 183
L + E ++ G++G +LGM+ F ++ S+ P + +L++ L
Sbjct: 133 FLLHLNEGSKIYRAIGDCAPAFGMIGTLLGMVQMFSNM----SDPSKLGPFMAVALLATL 188
Query: 184 LGLCVS 189
G V+
Sbjct: 189 YGAVVA 194
>gi|94500303|ref|ZP_01306836.1| flagellar motor protein [Oceanobacter sp. RED65]
gi|94427602|gb|EAT12579.1| flagellar motor protein [Oceanobacter sp. RED65]
Length = 247
Score = 42.9 bits (100), Expect = 0.033, Method: Composition-based stats.
Identities = 28/172 (16%), Positives = 60/172 (34%), Gaps = 22/172 (12%)
Query: 20 MGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNH 79
+ V+ L S+ W +I + L ++T+C+
Sbjct: 45 AAVLVQTPFNTLLTASMRGWWLIFPPRYDLHDL----------------IDTLCQWGAAA 88
Query: 80 HNIGLAAIFMSAMSEWKKSCDKGAR--SPIGIQDRIDRMMDVAIARELEEITEKLSFLGS 137
G + A E KG + + I +++ + ++ + E S
Sbjct: 89 RREGFLGLENIAKVEPMPLAKKGLHLLADGQSSEAIRNSLELDMYKQEDAGLEAAHVYES 148
Query: 138 MSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVS 189
+ +GILGAVLG++ ++ + PGI + ++ + G+ +
Sbjct: 149 LGGYAPTIGILGAVLGLIQVMGNL----QDPAAIGPGIATAFVATIYGVGSA 196
>gi|154246222|ref|YP_001417180.1| TonB-system energizer ExbB type-2 [Xanthobacter autotrophicus Py2]
gi|154160307|gb|ABS67523.1| TonB-system energizer ExbB type-2 [Xanthobacter autotrophicus Py2]
Length = 157
Score = 42.9 bits (100), Expect = 0.033, Method: Composition-based stats.
Identities = 13/42 (30%), Positives = 25/42 (59%)
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN 168
E++++L + S++S +G+LG VLG+M F S+ +
Sbjct: 54 ELSKRLVVVASVASNAPYIGLLGTVLGIMLTFSSMDLSAGAD 95
>gi|254519160|ref|ZP_05131216.1| MotA/TolQ/ExbB proton channel family protein [Clostridium sp.
7_2_43FAA]
gi|226912909|gb|EEH98110.1| MotA/TolQ/ExbB proton channel family protein [Clostridium sp.
7_2_43FAA]
Length = 260
Score = 42.9 bits (100), Expect = 0.033, Method: Composition-based stats.
Identities = 12/74 (16%), Positives = 31/74 (41%), Gaps = 4/74 (5%)
Query: 116 MMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGI 175
++ + + E + +S + +GI+G V+G++ ++ + P I
Sbjct: 128 SLETRLEQISERHNQGISIFEAAGGYAPTMGIIGTVMGLVQVLSNL----DDPSTLGPKI 183
Query: 176 IESLISILLGLCVS 189
+ I+ L G+ +
Sbjct: 184 AVAFIATLYGIGTA 197
>gi|167750718|ref|ZP_02422845.1| hypothetical protein EUBSIR_01696 [Eubacterium siraeum DSM 15702]
gi|167656397|gb|EDS00527.1| hypothetical protein EUBSIR_01696 [Eubacterium siraeum DSM 15702]
Length = 145
Score = 42.9 bits (100), Expect = 0.033, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 31/75 (41%), Gaps = 3/75 (4%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
D++ M+D AI E F S G+LG ++G++ + + SN
Sbjct: 10 DKVKSMLDDAIDFMCERHERGRLFFEKGMSVFPAFGMLGTLVGLVNMLKGMGADSSN--- 66
Query: 171 SIPGIIESLISILLG 185
G+ +LI+ G
Sbjct: 67 LSSGMAVALITTFYG 81
>gi|78358628|ref|YP_390077.1| chemotaxis protein MotA [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
gi|78221033|gb|ABB40382.1| chemotaxis protein MotA [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
Length = 254
Score = 42.9 bits (100), Expect = 0.033, Method: Composition-based stats.
Identities = 13/79 (16%), Positives = 35/79 (44%), Gaps = 4/79 (5%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
I +++ I+ + + +M + +G++G V+G++ Q++ S+
Sbjct: 121 QAIQEILETEISSLESRHETGVEIINAMGAYAPALGMIGTVIGLVQMLQTM----SDPSS 176
Query: 171 SIPGIIESLISILLGLCVS 189
P + +LI+ G ++
Sbjct: 177 IGPAMAVALITTFYGAVLA 195
>gi|115524023|ref|YP_780934.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris BisA53]
gi|115517970|gb|ABJ05954.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris BisA53]
Length = 257
Score = 42.9 bits (100), Expect = 0.033, Method: Composition-based stats.
Identities = 20/126 (15%), Positives = 45/126 (35%), Gaps = 5/126 (3%)
Query: 65 SGQSL-ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAR 123
S + L + + + + G + E + + + I M+
Sbjct: 73 SARDLVDELARIAEIARKQGPVGLEKVETDEPFLAKGIRYVADGYDLEFIRDNMERDRDN 132
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISIL 183
L + E ++ G++G +LGM+ F ++ S+ P + +L++ L
Sbjct: 133 FLLHLNEGSKIYRAIGDCAPAFGMIGTLLGMVQMFSNM----SDPSKLGPFMAVALLATL 188
Query: 184 LGLCVS 189
G V+
Sbjct: 189 YGALVA 194
>gi|320538204|ref|ZP_08038099.1| putative chemotaxis protein PomA [Treponema phagedenis F0421]
gi|3024169|sp|Q56331|MOTA_TREPH RecName: Full=Motility protein A; AltName: Full=Chemotaxis protein
MotA
gi|1399285|gb|AAB03250.1| MotA [Treponema phagedenis]
gi|320145021|gb|EFW36742.1| putative chemotaxis protein PomA [Treponema phagedenis F0421]
Length = 259
Score = 42.9 bits (100), Expect = 0.034, Method: Composition-based stats.
Identities = 20/132 (15%), Positives = 53/132 (40%), Gaps = 8/132 (6%)
Query: 61 QLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMS---EWKKSCDKGARSPIGIQDRIDRMM 117
F + ++ + + GL A+ E+ ++ + I + I +M
Sbjct: 69 ADFHEKEIVQRLYALAEKSRRTGLLALEEEIQDFDDEFMRTGLRNVVDGIDG-EAIRNLM 127
Query: 118 DVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIE 177
+ ++ E +SF+ + ++ G+LG V+G++G ++ + +
Sbjct: 128 ENELSHMEERHNRWISFINAWATLAPGYGMLGTVMGLIGMLMAL----EDKSSLGQNMAV 183
Query: 178 SLISILLGLCVS 189
+L++ L G ++
Sbjct: 184 ALVTTLYGSLMA 195
>gi|93100138|emb|CAJ90748.1| ExbB1 protein [Listonella anguillarum]
Length = 235
Score = 42.9 bits (100), Expect = 0.034, Method: Composition-based stats.
Identities = 17/94 (18%), Positives = 40/94 (42%), Gaps = 2/94 (2%)
Query: 121 IARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV--VSIPGIIES 178
+ + ++ L L + L+G+LG VLG++ F+ +A N G+ +
Sbjct: 102 LQEKRHQLHSGLRILSLIGVISPLLGLLGTVLGLIEMFKGVALSSGNITPNDLADGLGIA 161
Query: 179 LISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEG 212
+ + GL +++P+ + + ++E
Sbjct: 162 MRTAAAGLLIALPAITGAQLLGVWADRVMAKLER 195
>gi|120603949|ref|YP_968349.1| MotA/TolQ/ExbB proton channel [Desulfovibrio vulgaris DP4]
gi|120564178|gb|ABM29922.1| MotA/TolQ/ExbB proton channel [Desulfovibrio vulgaris DP4]
Length = 252
Score = 42.9 bits (100), Expect = 0.034, Method: Composition-based stats.
Identities = 10/79 (12%), Positives = 33/79 (41%), Gaps = 4/79 (5%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ I+ ++ + + +M + +G++G V+G++ + + ++
Sbjct: 121 EAIEDILRCEMENMETRHESGAAIFAAMGAYAPALGLIGTVIGLVQMLKRM----NDPST 176
Query: 171 SIPGIIESLISILLGLCVS 189
P + +LI+ G ++
Sbjct: 177 IGPAMSVALITTFYGAVLA 195
>gi|170728331|ref|YP_001762357.1| MotA/TolQ/ExbB proton channel [Shewanella woodyi ATCC 51908]
gi|169813678|gb|ACA88262.1| MotA/TolQ/ExbB proton channel [Shewanella woodyi ATCC 51908]
Length = 244
Score = 42.9 bits (100), Expect = 0.035, Method: Composition-based stats.
Identities = 27/174 (15%), Positives = 65/174 (37%), Gaps = 8/174 (4%)
Query: 29 TLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIF 88
LFI + ++ +I+++ + F ++ W + L S + L
Sbjct: 18 WPLFICAFITLMIILERLALML-----FELPKRDTWLTK-LREGTSSATSEQCQQLLTQL 71
Query: 89 MSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGIL 148
S K ++ + ++++ + ++ ++ L L M L+G+L
Sbjct: 72 SRGNSMLAKGSYLLLTHRDQSREMREEIINLWLLKQRGKLQSGLKVLQVMGIITPLLGLL 131
Query: 149 GAVLGMMGFFQSIAGYYS--NNVVSIPGIIESLISILLGLCVSIPSSIAYNKFI 200
G VLG++ F + G+ ++ + GL +++P+ + F
Sbjct: 132 GTVLGLIEMFNQLGLSQGPVTPAQLASGLGLAMNTTAAGLIIAVPAITLAHLFT 185
>gi|313902671|ref|ZP_07836070.1| MotA/TolQ/ExbB proton channel [Thermaerobacter subterraneus DSM
13965]
gi|313467109|gb|EFR62624.1| MotA/TolQ/ExbB proton channel [Thermaerobacter subterraneus DSM
13965]
Length = 284
Score = 42.9 bits (100), Expect = 0.037, Method: Composition-based stats.
Identities = 13/79 (16%), Positives = 32/79 (40%), Gaps = 4/79 (5%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ ++ +M+ A+ E L + +GI+G VLG++ ++ +
Sbjct: 122 EMVEEVMENALQAEQRHYLVAAGVLETAGGYAPTMGIIGTVLGLIHVLGNL----EDTSS 177
Query: 171 SIPGIIESLISILLGLCVS 189
P I + ++ G+ +
Sbjct: 178 LGPAIAVAFMATFYGIASA 196
>gi|46578467|ref|YP_009275.1| chemotaxis protein MotA [Desulfovibrio vulgaris str. Hildenborough]
gi|46447878|gb|AAS94534.1| chemotaxis protein MotA [Desulfovibrio vulgaris str. Hildenborough]
gi|311232395|gb|ADP85249.1| MotA/TolQ/ExbB proton channel [Desulfovibrio vulgaris RCH1]
Length = 252
Score = 42.9 bits (100), Expect = 0.037, Method: Composition-based stats.
Identities = 10/79 (12%), Positives = 33/79 (41%), Gaps = 4/79 (5%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ I+ ++ + + +M + +G++G V+G++ + + ++
Sbjct: 121 EAIEDILRCEMENMETRHESGAAIFAAMGTYAPALGLIGTVIGLVQMLKRM----NDPST 176
Query: 171 SIPGIIESLISILLGLCVS 189
P + +LI+ G ++
Sbjct: 177 IGPAMSVALITTFYGAVLA 195
>gi|52079918|ref|YP_078709.1| flagellar motor protein MotA [Bacillus licheniformis ATCC 14580]
gi|52785289|ref|YP_091118.1| flagellar motor protein MotA [Bacillus licheniformis ATCC 14580]
gi|319646265|ref|ZP_08000495.1| MotA protein [Bacillus sp. BT1B_CT2]
gi|52003129|gb|AAU23071.1| motility protein A [Bacillus licheniformis ATCC 14580]
gi|52347791|gb|AAU40425.1| MotA [Bacillus licheniformis ATCC 14580]
gi|317392015|gb|EFV72812.1| MotA protein [Bacillus sp. BT1B_CT2]
Length = 267
Score = 42.9 bits (100), Expect = 0.037, Method: Composition-based stats.
Identities = 27/158 (17%), Positives = 50/158 (31%), Gaps = 6/158 (3%)
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ + + L A E+ K+ A D I ++ + E
Sbjct: 82 FSEWAQIARREGLLALEANLNEIDDEFLKNGMSMAVDGQSA-DFIRDVLTEEVEAMEERH 140
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCV 188
+ +G+LGAV+G++ + S+ I + ++ LLG+
Sbjct: 141 QVGAGIFTQAGTYAPTLGVLGAVVGLIAALADM----SDTEALGHAISAAFVATLLGIFT 196
Query: 189 S-IPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+ NK SK+ E +IL Q
Sbjct: 197 GYVLWHPFANKLKRKSKQEVKVREVMIEGILSILEGQA 234
>gi|167629588|ref|YP_001680087.1| flagellar motor component mota, putative [Heliobacterium
modesticaldum Ice1]
gi|167592328|gb|ABZ84076.1| flagellar motor component mota, putative [Heliobacterium
modesticaldum Ice1]
Length = 260
Score = 42.9 bits (100), Expect = 0.038, Method: Composition-based stats.
Identities = 20/139 (14%), Positives = 52/139 (37%), Gaps = 8/139 (5%)
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
+ + + + L A + ++ + G ++ + +++ IA E
Sbjct: 84 DMAQQARREGLLSLEASIDKLEEPFLRNGIRLIVDGQG-EEFVRELLEAEIAAMEERHRV 142
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSI 190
S S +G+LGAV+G++G ++ + I + ++ L G+
Sbjct: 143 GAQIFTSAGSYAPTLGVLGAVIGLIGALGNLNDVNKLGTM----IAAAFVATLFGIFTG- 197
Query: 191 PSSIAYNKFIEDSKKFAMQ 209
+ ++ F K+ + +
Sbjct: 198 --YVLWHPFATKLKRKSAE 214
>gi|313639079|gb|EFS04060.1| chemotaxis protein MotA [Listeria seeligeri FSL S4-171]
Length = 283
Score = 42.9 bits (100), Expect = 0.040, Method: Composition-based stats.
Identities = 16/132 (12%), Positives = 40/132 (30%), Gaps = 7/132 (5%)
Query: 73 CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKL 132
++ + L + K + + + +++ ++ E
Sbjct: 86 ADEIRRSGVLALEDSVDEIEDPFMKRGMRLVVDGQASPEFLRDVLEEEVSSMEERHAAYA 145
Query: 133 SFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPS 192
S + +G+LGA +G++ + SN I + I + G+
Sbjct: 146 KIFASAGAYAPTLGVLGAAMGLIHAMGEM----SNPDKLSEAIAAAFICTIFGIFTG--- 198
Query: 193 SIAYNKFIEDSK 204
+ + F K
Sbjct: 199 YVLWTPFANKLK 210
>gi|187778758|ref|ZP_02995231.1| hypothetical protein CLOSPO_02353 [Clostridium sporogenes ATCC
15579]
gi|187772383|gb|EDU36185.1| hypothetical protein CLOSPO_02353 [Clostridium sporogenes ATCC
15579]
Length = 270
Score = 42.9 bits (100), Expect = 0.040, Method: Composition-based stats.
Identities = 13/87 (14%), Positives = 37/87 (42%), Gaps = 7/87 (8%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ I +M++ I + L + G++G ++G++ ++ +
Sbjct: 125 ETIREIMELEIDEMEKRHKSGADMLKTWGGYSPAFGMIGTLIGLIQMLANLTDSSTI--- 181
Query: 171 SIPGIIESLISILLGLCVSIPSSIAYN 197
G+ ++LI+ G S+ +++ +N
Sbjct: 182 -ASGMGKALITTFYG---SVMANMVFN 204
>gi|152999553|ref|YP_001365234.1| MotA/TolQ/ExbB proton channel [Shewanella baltica OS185]
gi|151364171|gb|ABS07171.1| MotA/TolQ/ExbB proton channel [Shewanella baltica OS185]
Length = 251
Score = 42.5 bits (99), Expect = 0.041, Method: Composition-based stats.
Identities = 30/196 (15%), Positives = 73/196 (37%), Gaps = 9/196 (4%)
Query: 6 LAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS 65
+ I D S Q+G+ L + + L+ + +++S F+ ++ W
Sbjct: 1 MPITDFSTLQ--TQLGVLT----WPLLLCAFLALMICLERSALFLHQTLLSIWPKKQAW- 53
Query: 66 GQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
SL + + L A + + + + + ++ + + ++
Sbjct: 54 VTSLRQSSSTATTENVSALLAQTSAQQDLLARGATLLLKQVHQPKVLREELLSLWLNKQQ 113
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYS--NNVVSIPGIIESLISIL 183
++ L L + L+G+LG VLG++ F + G+ ++ +
Sbjct: 114 RDLQAGLKVLQVIGIISPLLGLLGTVLGLIDMFAQLGQSQGPVTPAQLSAGLGLAMNTTA 173
Query: 184 LGLCVSIPSSIAYNKF 199
GL +++P+ A + F
Sbjct: 174 AGLIIAVPAITAAHLF 189
>gi|317121530|ref|YP_004101533.1| MotA/TolQ/ExbB proton channel [Thermaerobacter marianensis DSM
12885]
gi|315591510|gb|ADU50806.1| MotA/TolQ/ExbB proton channel [Thermaerobacter marianensis DSM
12885]
Length = 285
Score = 42.5 bits (99), Expect = 0.041, Method: Composition-based stats.
Identities = 14/79 (17%), Positives = 31/79 (39%), Gaps = 4/79 (5%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ ++ +M AI E L + +GI+G VLG++ ++ +
Sbjct: 122 EMVEEVMANAIEAEQRHHLVAAGVLETAGGYAPTMGIIGTVLGLIHVLGNL----EDTSK 177
Query: 171 SIPGIIESLISILLGLCVS 189
P I + ++ G+ +
Sbjct: 178 LGPAIAVAFMATFYGIATA 196
>gi|220927722|ref|YP_002504631.1| MotA/TolQ/ExbB proton channel [Clostridium cellulolyticum H10]
gi|219998050|gb|ACL74651.1| MotA/TolQ/ExbB proton channel [Clostridium cellulolyticum H10]
Length = 266
Score = 42.5 bits (99), Expect = 0.042, Method: Composition-based stats.
Identities = 19/123 (15%), Positives = 46/123 (37%), Gaps = 6/123 (4%)
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDR--IDRMMDVAIARELE 126
+ + + GL ++ A + + KG + + I ++ + E
Sbjct: 78 INELADLSEKARKDGLLSLEQDAQTNKNELIRKGLALVVDGIETEVIKDILARETELQEE 137
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGL 186
+ +M +G+ G V+GM+ + + S++ P I + I+ +LG+
Sbjct: 138 IYESGVKIFEAMGGTWPAMGVCGTVMGMISILKDL----SDSDALGPKISGAFIATMLGV 193
Query: 187 CVS 189
+
Sbjct: 194 GTA 196
>gi|90410907|ref|ZP_01218921.1| flagellar motor protein [Photobacterium profundum 3TCK]
gi|90328120|gb|EAS44431.1| flagellar motor protein [Photobacterium profundum 3TCK]
Length = 253
Score = 42.5 bits (99), Expect = 0.042, Method: Composition-based stats.
Identities = 23/179 (12%), Positives = 60/179 (33%), Gaps = 14/179 (7%)
Query: 14 FALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVN--FITLRRQFREFEQLFWSGQSL-E 70
+F V ++ +L ++ V+I+ S++ F + + F + + L
Sbjct: 26 LGMF----FDVPSVLIVLGG---TTFVVLIKYSISQFFGAAKIAVKAFMFKTDNPEDLIA 78
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
+ + G A+ + D + + I E +
Sbjct: 79 KIVEMADAARKGGFLALEEMEVDNTFLRKGIDLLVDGHDADVVRATLQKDIGLTNERHEK 138
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVS 189
+ S +G++G ++G++ ++ + P + +L++ L G V+
Sbjct: 139 GVGIFSSFGDVAPAMGMIGTLIGLVAMLSNM----DDPKSIGPAMAVALLTTLYGSIVA 193
>gi|47091648|ref|ZP_00229444.1| chemotaxis protein MotA [Listeria monocytogenes str. 4b H7858]
gi|217965217|ref|YP_002350895.1| chemotaxis protein MotA (Motility protein A) [Listeria
monocytogenes HCC23]
gi|47019967|gb|EAL10704.1| chemotaxis protein MotA [Listeria monocytogenes str. 4b H7858]
gi|217334487|gb|ACK40281.1| chemotaxis protein MotA (Motility protein A) [Listeria
monocytogenes HCC23]
Length = 263
Score = 42.5 bits (99), Expect = 0.043, Method: Composition-based stats.
Identities = 19/113 (16%), Positives = 39/113 (34%), Gaps = 11/113 (9%)
Query: 92 MSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAV 151
M + G SP ++D +++ +A E S + +G+LGA
Sbjct: 89 MKRGMRLVVDGQSSPEFLRD----VLEEEVASMEERHAAYAKIFASAGAYAPTLGVLGAA 144
Query: 152 LGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSK 204
+G++ + SN I + + + G+ + + F K
Sbjct: 145 MGLIHAMGEM----SNPDKLSEAIAAAFVCTIFGIFTG---YVLWTPFANKLK 190
>gi|217974496|ref|YP_002359247.1| MotA/TolQ/ExbB proton channel [Shewanella baltica OS223]
gi|217499631|gb|ACK47824.1| MotA/TolQ/ExbB proton channel [Shewanella baltica OS223]
Length = 251
Score = 42.5 bits (99), Expect = 0.047, Method: Composition-based stats.
Identities = 30/196 (15%), Positives = 73/196 (37%), Gaps = 9/196 (4%)
Query: 6 LAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS 65
+ I D S Q+G+ L + + L+ + +++S F+ ++ W
Sbjct: 1 MPITDFSTLQ--TQLGVLT----WPLLLCAFLALMICLERSALFLHQTLLSIWPKKQAW- 53
Query: 66 GQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
SL + + L A + + + + + ++ + + ++
Sbjct: 54 VTSLRQSRSTATTENVSALLAQTSAQQDLLARGATLLLKQVHQPKVLREELLSLWLNKQQ 113
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYS--NNVVSIPGIIESLISIL 183
++ L L + L+G+LG VLG++ F + G+ ++ +
Sbjct: 114 RDLQAGLKVLQVIGIISPLLGLLGTVLGLIDMFAQLGQSQGPVTPAQLSAGLGLAMNTTA 173
Query: 184 LGLCVSIPSSIAYNKF 199
GL +++P+ A + F
Sbjct: 174 AGLIIAVPAITAAHLF 189
>gi|319425364|gb|ADV53438.1| TonB mediated energy transduction system, inner membrane component,
ExbB [Shewanella putrefaciens 200]
Length = 244
Score = 42.5 bits (99), Expect = 0.047, Method: Composition-based stats.
Identities = 29/198 (14%), Positives = 75/198 (37%), Gaps = 13/198 (6%)
Query: 6 LAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS 65
+ + D S Q+G+ L + + L+ + +++S F+ ++ W
Sbjct: 1 MPMTDFSTLQ--TQLGVLT----WPLLLCAFLALMICLERSALFLHQTLLSILPQKQAWI 54
Query: 66 GQSLETVCKSLKNHHNIGLAA--IFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAR 123
+ + + N L + ++ K P +++ + + + + +
Sbjct: 55 KNLHRSTSTATTENINTLLEQTSVQNDLLARGATLLLKQVHQPKTLREEL---LSLWLNK 111
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYS--NNVVSIPGIIESLIS 181
+ ++ L L + L+G+LG VLG++ F + G+ ++ +
Sbjct: 112 QQRDLQAGLKVLQVIGIISPLLGLLGTVLGLIDMFAELGQSQGPVTPAQLSAGLGLAMNT 171
Query: 182 ILLGLCVSIPSSIAYNKF 199
GL +++P+ A + F
Sbjct: 172 TAAGLIIAVPAITAAHLF 189
>gi|87119462|ref|ZP_01075359.1| chemotaxis MotA protein [Marinomonas sp. MED121]
gi|86164938|gb|EAQ66206.1| chemotaxis MotA protein [Marinomonas sp. MED121]
Length = 246
Score = 42.5 bits (99), Expect = 0.047, Method: Composition-based stats.
Identities = 21/124 (16%), Positives = 48/124 (38%), Gaps = 6/124 (4%)
Query: 63 FWSGQSL-ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
F + + L + + H + L + S + + + A + ++ +
Sbjct: 74 FSNARELIYKLANQARRHSVVSLESELNSLNDSFSERALQMAIDGAD-PESFSELLHDEV 132
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLIS 181
R ++ + FL S+ +GI+G+VLG++ ++ + GI + +S
Sbjct: 133 MRFRDKRMASVDFLESIGGYAPTLGIMGSVLGLIQAMANL----DSPEALGHGIAVAFVS 188
Query: 182 ILLG 185
L G
Sbjct: 189 TLYG 192
>gi|77164351|ref|YP_342876.1| flagellar motor protein PomA [Nitrosococcus oceani ATCC 19707]
gi|254434685|ref|ZP_05048193.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Nitrosococcus oceani AFC27]
gi|76882665|gb|ABA57346.1| MotA/TolQ/ExbB proton channel [Nitrosococcus oceani ATCC 19707]
gi|207091018|gb|EDZ68289.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Nitrosococcus oceani AFC27]
Length = 256
Score = 42.5 bits (99), Expect = 0.048, Method: Composition-based stats.
Identities = 10/79 (12%), Positives = 33/79 (41%), Gaps = 4/79 (5%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ + R++ + + L ++ +G++G ++G++ S+ +
Sbjct: 119 EIVRRVLMTELRQTLSRHELGQKIFKAIGDVAPAMGMIGTLIGLVQMLSSM----DDPKK 174
Query: 171 SIPGIIESLISILLGLCVS 189
P + +L++ L G ++
Sbjct: 175 IGPAMAVALLTTLYGAMIA 193
>gi|320354971|ref|YP_004196310.1| MotA/TolQ/ExbB proton channel [Desulfobulbus propionicus DSM 2032]
gi|320123473|gb|ADW19019.1| MotA/TolQ/ExbB proton channel [Desulfobulbus propionicus DSM 2032]
Length = 261
Score = 42.5 bits (99), Expect = 0.048, Method: Composition-based stats.
Identities = 29/155 (18%), Positives = 57/155 (36%), Gaps = 7/155 (4%)
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQD--RIDRMMDVAIARELE 126
+ +C G+ A+ A S + K + D I ++++ ++ E
Sbjct: 77 IADICAFAAKARKNGIIALEQDAKSHKDRFMKKAISLSVDGIDPKEIRELLEIDMSATEE 136
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGL 186
+ F + +GI+GAVLG++ ++ S+ GI + ++ + GL
Sbjct: 137 QAKMSAEFFEAAGGYAPTIGIIGAVLGLIHVMSNL----SDTSKLGAGIAVAFVATIYGL 192
Query: 187 CVS-IPSSIAYNKFIEDSKKFAMQMEGFANEFSAI 220
+ I A K K ++ E AI
Sbjct: 193 ITANILCLPAATKIKLRIKDEMVRKEMIIAGVVAI 227
>gi|315301918|ref|ZP_07872929.1| chemotaxis protein MotA [Listeria ivanovii FSL F6-596]
gi|313629714|gb|EFR97836.1| chemotaxis protein MotA [Listeria ivanovii FSL F6-596]
Length = 283
Score = 42.5 bits (99), Expect = 0.050, Method: Composition-based stats.
Identities = 16/132 (12%), Positives = 40/132 (30%), Gaps = 7/132 (5%)
Query: 73 CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKL 132
++ + L + K + + + +++ ++ E
Sbjct: 86 ADEIRRSGVLALEDSVDEMEDPFMKRGMRLVVDGQSSPEFLRDVLEEEVSSMEERHAAYA 145
Query: 133 SFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPS 192
S + +G+LGA +G++ + SN I + I + G+
Sbjct: 146 KIFASAGAYAPTLGVLGAAMGLIHAMGEM----SNPDKLSEAIAAAFICTIFGIFTG--- 198
Query: 193 SIAYNKFIEDSK 204
+ + F K
Sbjct: 199 YVLWTPFANKLK 210
>gi|229189824|ref|ZP_04316835.1| Chemotaxis protein, MotA [Bacillus cereus ATCC 10876]
gi|228593632|gb|EEK51440.1| Chemotaxis protein, MotA [Bacillus cereus ATCC 10876]
Length = 277
Score = 42.5 bits (99), Expect = 0.050, Method: Composition-based stats.
Identities = 14/86 (16%), Positives = 39/86 (45%), Gaps = 8/86 (9%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
+D + ++ I E+ E+ + + L + G++G ++G++ Q++ +
Sbjct: 141 EDELKEVLLKDIDTEVYELRKGAALLDKIGDFAPAWGMIGTLIGLIIMLQNL----QDTS 196
Query: 170 VSIPGIIESLISILLGLC----VSIP 191
G+ ++++ L G ++IP
Sbjct: 197 QIGTGMAVAMLTTLYGSVLANMIAIP 222
>gi|296122085|ref|YP_003629863.1| MotA/TolQ/ExbB proton channel [Planctomyces limnophilus DSM 3776]
gi|296014425|gb|ADG67664.1| MotA/TolQ/ExbB proton channel [Planctomyces limnophilus DSM 3776]
Length = 483
Score = 42.5 bits (99), Expect = 0.051, Method: Composition-based stats.
Identities = 16/103 (15%), Positives = 38/103 (36%), Gaps = 2/103 (1%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYY--SNNVV 170
++ + + + + L +++ A ++G LG V+G+ ++ S+
Sbjct: 140 LESHLSYLADTAIARLHSSYAALRTITWAIPILGFLGTVIGITMAIANVTPEQLESSLNE 199
Query: 171 SIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGF 213
G+ + + L L +S+ A Q+E F
Sbjct: 200 VTSGLAVAFDTTALSLALSMILVFATFAIERGESNVLDQIEDF 242
>gi|152990730|ref|YP_001356452.1| flagellar motor protein MotA [Nitratiruptor sp. SB155-2]
gi|151422591|dbj|BAF70095.1| flagellar motor protein MotA [Nitratiruptor sp. SB155-2]
Length = 252
Score = 42.5 bits (99), Expect = 0.051, Method: Composition-based stats.
Identities = 16/80 (20%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
+ I+ + AIA+E ++ ++ S+ +G++G ++G++ Q++ S+
Sbjct: 122 IEDIEANFENAIAQEDSQLDTEIKVWDSLGELFPALGMIGTLIGLIQMLQNL----SDPA 177
Query: 170 VSIPGIIESLISILLGLCVS 189
PG+ ++I+ L G ++
Sbjct: 178 ALGPGMAVAMITTLYGAILA 197
>gi|51894109|ref|YP_076800.1| flagellar motor protein MotA [Symbiobacterium thermophilum IAM
14863]
gi|51857798|dbj|BAD41956.1| flagellar motor protein MotA [Symbiobacterium thermophilum IAM
14863]
Length = 265
Score = 42.5 bits (99), Expect = 0.051, Method: Composition-based stats.
Identities = 24/147 (16%), Positives = 55/147 (37%), Gaps = 9/147 (6%)
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPI--GIQDRIDRMMDVAIARELE 126
++ + + GL ++ A +G + +++ +M ++ +
Sbjct: 78 IDLLVGLAEKARRNGLLSLQEDAEHAENPVVQRGLTMAVDGADPEQVVAVMRAMSEQQAD 137
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGL 186
EI + + +GI+G V+G++ +I G S P I + ++ L GL
Sbjct: 138 EIIRGAAVFDTAGGYAPTLGIMGTVMGLI----TIMGRLSEPDTLGPAIAVAFLATLYGL 193
Query: 187 CVSIPSSIAYNKFIEDSKKFAMQMEGF 213
+ ++ + K A Q+ F
Sbjct: 194 GSA---NLFFLPMGYKIKAIAKQLTHF 217
>gi|42524416|ref|NP_969796.1| motility protein A [Bdellovibrio bacteriovorus HD100]
gi|39576625|emb|CAE80789.1| motility protein A [Bdellovibrio bacteriovorus HD100]
Length = 293
Score = 42.5 bits (99), Expect = 0.051, Method: Composition-based stats.
Identities = 18/79 (22%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
D + ++ A+ + + E++ +MS G+LGA LGM+ Q++ + + +
Sbjct: 147 DELADVLTNALRGKKKRDDEEIKVWHTMSRFPPAFGLLGATLGMISLLQTLGEPGAQDRI 206
Query: 171 SIPGIIESLISILLGLCVS 189
P + +L++ GL V+
Sbjct: 207 -GPAMATALVATFYGLVVA 224
>gi|289433963|ref|YP_003463835.1| chemotaxis protein MotA [Listeria seeligeri serovar 1/2b str.
SLCC3954]
gi|289170207|emb|CBH26747.1| chemotaxis protein MotA [Listeria seeligeri serovar 1/2b str.
SLCC3954]
gi|313634397|gb|EFS00986.1| chemotaxis protein MotA [Listeria seeligeri FSL N1-067]
Length = 283
Score = 42.5 bits (99), Expect = 0.052, Method: Composition-based stats.
Identities = 16/132 (12%), Positives = 40/132 (30%), Gaps = 7/132 (5%)
Query: 73 CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKL 132
++ + L + K + + + +++ ++ E
Sbjct: 86 ADEIRRSGVLALEDSVDEIEDPFMKRGMRLVVDGQSSPEFLRDVLEEEVSSMEERHAAYA 145
Query: 133 SFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPS 192
S + +G+LGA +G++ + SN I + I + G+
Sbjct: 146 KIFASAGAYAPTLGVLGAAMGLIHAMGEM----SNPDKLSEAIAAAFICTIFGIFTG--- 198
Query: 193 SIAYNKFIEDSK 204
+ + F K
Sbjct: 199 YVLWTPFANKLK 210
>gi|225569969|ref|ZP_03778994.1| hypothetical protein CLOHYLEM_06064 [Clostridium hylemonae DSM
15053]
gi|225161439|gb|EEG74058.1| hypothetical protein CLOHYLEM_06064 [Clostridium hylemonae DSM
15053]
Length = 274
Score = 42.1 bits (98), Expect = 0.053, Method: Composition-based stats.
Identities = 9/79 (11%), Positives = 35/79 (44%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
D++ M++ + + E+++ + G++G ++G++ +S+ ++
Sbjct: 121 DKVREMLETEVDSMSQRHEEEIAIYEKAAGYAPAFGMIGTLVGLINMLKSMDLSQGSSST 180
Query: 171 SIPGIIESLISILLGLCVS 189
+ +L++ G ++
Sbjct: 181 LGESMATALVTTFYGCIMA 199
>gi|138896103|ref|YP_001126556.1| flagellar motor protein MotA [Geobacillus thermodenitrificans
NG80-2]
gi|134267616|gb|ABO67811.1| Motility protein A [Geobacillus thermodenitrificans NG80-2]
Length = 263
Score = 42.1 bits (98), Expect = 0.053, Method: Composition-based stats.
Identities = 17/96 (17%), Positives = 37/96 (38%), Gaps = 7/96 (7%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
Q+ I +M IA E + + +G+LGAV+G++ ++
Sbjct: 122 QEFIRDVMTEEIAAMEERHEANAAIFTHAGTYAPTLGVLGAVIGLIAALGNMENIGELGQ 181
Query: 170 VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKK 205
I + ++ LLG+ + ++ F ++
Sbjct: 182 A----ISAAFVATLLGIFSG---YVLWHPFANKLRR 210
>gi|288561307|ref|YP_003424793.1| MotA/TolQ/ExbB proton channel family protein [Methanobrevibacter
ruminantium M1]
gi|288544017|gb|ADC47901.1| MotA/TolQ/ExbB proton channel family protein [Methanobrevibacter
ruminantium M1]
Length = 248
Score = 42.1 bits (98), Expect = 0.054, Method: Composition-based stats.
Identities = 27/225 (12%), Positives = 89/225 (39%), Gaps = 11/225 (4%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
N G +D S+ A+ + + V ++ + +F++++ ++ S + + ++
Sbjct: 32 NGTGFPFLDSSLTAITQALQIPVIILLLIFLVFAVVTLGKLL--SEYLSRKKVPIKLIKE 89
Query: 62 LFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
+ +S ++ + ++ + + + + E S G +S + R+ I
Sbjct: 90 MIYSIYDAQSAEEIKNIVNSSDIQSSQKTILCELADSEHLGKKSRETLARRL-------I 142
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLIS 181
E ++IT+ L ++ G +G++G ++ M ++ + S I + +
Sbjct: 143 DNEEDKITQNLQKTDIVTRIGPTLGLMGTLIPMGPGLAALGTGDVTTLASA--ITIAFNT 200
Query: 182 ILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
++G+ + A ++ ++ + ++++ +
Sbjct: 201 TVIGIGAGAAAYFASKIRRRWFGEYLANLDALMDAILDNINKRDD 245
>gi|254519412|ref|ZP_05131468.1| chemotaxis MotA protein [Clostridium sp. 7_2_43FAA]
gi|226913161|gb|EEH98362.1| chemotaxis MotA protein [Clostridium sp. 7_2_43FAA]
Length = 268
Score = 42.1 bits (98), Expect = 0.055, Method: Composition-based stats.
Identities = 10/79 (12%), Positives = 31/79 (39%), Gaps = 4/79 (5%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ I ++++ I + + G+LG ++G++ ++ +
Sbjct: 124 ETIREILELEIGEMENRHERGAGIYAAWGAYAPAFGMLGTLIGLIQMLANLTDVANI--- 180
Query: 171 SIPGIIESLISILLGLCVS 189
G+ ++LI+ G ++
Sbjct: 181 -ASGMGKALITTFYGSLLA 198
>gi|120599998|ref|YP_964572.1| MotA/TolQ/ExbB proton channel [Shewanella sp. W3-18-1]
gi|120560091|gb|ABM26018.1| MotA/TolQ/ExbB proton channel [Shewanella sp. W3-18-1]
Length = 244
Score = 42.1 bits (98), Expect = 0.055, Method: Composition-based stats.
Identities = 30/203 (14%), Positives = 77/203 (37%), Gaps = 23/203 (11%)
Query: 6 LAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS 65
+ + D S Q+G+ L + + L+ + +++S F+ ++ W
Sbjct: 1 MPMTDFSTLQ--TQLGVLT----WPLLLCAFLALMICLERSALFLHQTLLSILPQKQAW- 53
Query: 66 GQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRI-------DRMMD 118
K+L+ + + + + D AR + ++ + ++
Sbjct: 54 -------IKNLRRSTSTATTENINTLLEQTSVQNDLLARGATLLLKQVHQPKTLREELLS 106
Query: 119 VAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYS--NNVVSIPGII 176
+ + ++ ++ L L + L+G+LG VLG++ F + G+
Sbjct: 107 LWLNKQQRDLQAGLKVLQVIGIISPLLGLLGTVLGLIDMFAELGQSQGPVTPAQLSAGLG 166
Query: 177 ESLISILLGLCVSIPSSIAYNKF 199
++ + GL +++P+ A + F
Sbjct: 167 LAMNTTAAGLIIAVPAITAAHLF 189
>gi|150390476|ref|YP_001320525.1| MotA/TolQ/ExbB proton channel [Alkaliphilus metalliredigens QYMF]
gi|149950338|gb|ABR48866.1| MotA/TolQ/ExbB proton channel [Alkaliphilus metalliredigens QYMF]
Length = 262
Score = 42.1 bits (98), Expect = 0.055, Method: Composition-based stats.
Identities = 17/114 (14%), Positives = 45/114 (39%), Gaps = 11/114 (9%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ + +++ +A E L M + G++G ++G++ + + +
Sbjct: 121 ELVRNLLETELAFIEERHQGGQGLLEMMGALAPAFGMVGTLIGLINLLRDL----DDPAS 176
Query: 171 SIPGIIESLISILLGLCVS----IPSSIAYNKFIEDSKKFAMQMEGFANEFSAI 220
P + +L++ G ++ IP + NK S++ ++ E +I
Sbjct: 177 IGPNMSVALLTTFYGALMANLIFIPLA---NKLKLRSREEILRKEIMVEGLLSI 227
>gi|332702473|ref|ZP_08422561.1| MotA/TolQ/ExbB proton channel [Desulfovibrio africanus str. Walvis
Bay]
gi|332552622|gb|EGJ49666.1| MotA/TolQ/ExbB proton channel [Desulfovibrio africanus str. Walvis
Bay]
Length = 274
Score = 42.1 bits (98), Expect = 0.056, Method: Composition-based stats.
Identities = 24/141 (17%), Positives = 57/141 (40%), Gaps = 10/141 (7%)
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
+ ++ + L +++ + + ++ I ++D I + E+
Sbjct: 83 KIARTASARGKVHLENSLPGIENQFMRHAVQMLVDGYS-REEIKEILDTRIEQGYEQEMS 141
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSI 190
S +M+ GI+G ++G++G QS+ +N P + +L + L G
Sbjct: 142 SASIYRTMAKLAPAFGIIGTLIGLIGMLQSL---QNNMASLGPSMAVALTTTLYG----- 193
Query: 191 PSSIAYNKFIEDSKKFAMQME 211
+ +AY F+ + K ++E
Sbjct: 194 -ALLAYVLFLPIAIKVEKRIE 213
>gi|323700141|ref|ZP_08112053.1| MotA/TolQ/ExbB proton channel [Desulfovibrio sp. ND132]
gi|323460073|gb|EGB15938.1| MotA/TolQ/ExbB proton channel [Desulfovibrio desulfuricans ND132]
Length = 253
Score = 42.1 bits (98), Expect = 0.056, Method: Composition-based stats.
Identities = 13/77 (16%), Positives = 36/77 (46%), Gaps = 4/77 (5%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI 172
I +++ I+ E + ++ + +G++G V+G++ Q++ S+
Sbjct: 123 IQEILETEISYLAERHATGADVVSALGTLAPAMGMIGTVIGLVQMLQTM----SDPSSIG 178
Query: 173 PGIIESLISILLGLCVS 189
P + +L++ L G ++
Sbjct: 179 PAMAVALLTTLYGAIIA 195
>gi|315125811|ref|YP_004067814.1| flagellar motor protein PomA [Pseudoalteromonas sp. SM9913]
gi|315014325|gb|ADT67663.1| flagellar motor protein PomA [Pseudoalteromonas sp. SM9913]
Length = 238
Score = 42.1 bits (98), Expect = 0.056, Method: Composition-based stats.
Identities = 13/85 (15%), Positives = 33/85 (38%), Gaps = 8/85 (9%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
D + + I+ + S+ +G++G ++G++ ++ +
Sbjct: 104 DVVRATLQKDISLTTTRHEMGATLFKSLGDIAPAMGMIGTLIGLVAMLSNM----DDPKA 159
Query: 171 SIPGIIESLISILLGLC----VSIP 191
P + +L++ L G V+IP
Sbjct: 160 IGPAMAVALLTTLYGAFLANVVAIP 184
>gi|295399257|ref|ZP_06809239.1| MotA/TolQ/ExbB proton channel [Geobacillus thermoglucosidasius
C56-YS93]
gi|294978723|gb|EFG54319.1| MotA/TolQ/ExbB proton channel [Geobacillus thermoglucosidasius
C56-YS93]
Length = 263
Score = 42.1 bits (98), Expect = 0.056, Method: Composition-based stats.
Identities = 24/117 (20%), Positives = 42/117 (35%), Gaps = 5/117 (4%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
QD I +M I E + + +G+LGAV+G++ ++
Sbjct: 122 QDFIRDVMTEEIEAMEERHEANAAIFSQAGTYAPTLGVLGAVIGLIAALSNMDNISEIGK 181
Query: 170 VSIPGIIESLISILLGLCVS-IPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
I + ++ LLG+ + NK SK+ A + +IL Q
Sbjct: 182 A----ISAAFVATLLGIFTGYVLWHPFANKLRRKSKEEAKIRQVMIEGVLSILEGQA 234
>gi|293391035|ref|ZP_06635369.1| TonB-system energizer ExbB [Aggregatibacter actinomycetemcomitans
D7S-1]
gi|290951569|gb|EFE01688.1| TonB-system energizer ExbB [Aggregatibacter actinomycetemcomitans
D7S-1]
Length = 61
Score = 42.1 bits (98), Expect = 0.056, Method: Composition-based stats.
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 175 IIESLISILLGLCVSIPSSIAYNKFIEDSK 204
I +L + LG+ V+IPS I YN +
Sbjct: 10 ITLALKATALGILVAIPSMIFYNALGRKVE 39
>gi|229543004|ref|ZP_04432064.1| MotA/TolQ/ExbB proton channel [Bacillus coagulans 36D1]
gi|229327424|gb|EEN93099.1| MotA/TolQ/ExbB proton channel [Bacillus coagulans 36D1]
Length = 267
Score = 42.1 bits (98), Expect = 0.056, Method: Composition-based stats.
Identities = 22/133 (16%), Positives = 48/133 (36%), Gaps = 8/133 (6%)
Query: 73 CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKL 132
++ + + L A + K+ A + I ++ I E
Sbjct: 86 AQTARREGLLALEARLDEVDDAFLKNGLSLAIDGQSA-EYIRDVLSEEIEAMEERHQMGA 144
Query: 133 SFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPS 192
+ + +G+LGAVLG++ ++ S+ V I + ++ LLG+
Sbjct: 145 AIFSQAGTYAPTLGVLGAVLGLIAALGNM----SDTEVLGHAISAAFVATLLGIFTG--- 197
Query: 193 SIAYNKFIEDSKK 205
+ ++ F K+
Sbjct: 198 YVLWHPFANKLKR 210
>gi|312110142|ref|YP_003988458.1| MotA/TolQ/ExbB proton channel [Geobacillus sp. Y4.1MC1]
gi|311215243|gb|ADP73847.1| MotA/TolQ/ExbB proton channel [Geobacillus sp. Y4.1MC1]
Length = 263
Score = 42.1 bits (98), Expect = 0.058, Method: Composition-based stats.
Identities = 24/117 (20%), Positives = 42/117 (35%), Gaps = 5/117 (4%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
QD I +M I E + + +G+LGAV+G++ ++
Sbjct: 122 QDFIRDVMTEEIEAMEERHEANAAIFSQAGTYAPTLGVLGAVIGLIAALSNMDNISEIGK 181
Query: 170 VSIPGIIESLISILLGLCVS-IPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
I + ++ LLG+ + NK SK+ A + +IL Q
Sbjct: 182 A----ISAAFVATLLGIFTGYVLWHPFANKLRRKSKEEAKIRQVMIEGVLSILEGQA 234
>gi|229043481|ref|ZP_04191191.1| Chemotaxis protein, MotA [Bacillus cereus AH676]
gi|228725859|gb|EEL77106.1| Chemotaxis protein, MotA [Bacillus cereus AH676]
Length = 277
Score = 42.1 bits (98), Expect = 0.058, Method: Composition-based stats.
Identities = 14/86 (16%), Positives = 39/86 (45%), Gaps = 8/86 (9%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
+D + ++ I E+ E+ + + L + G++G ++G++ Q++ +
Sbjct: 141 EDELKEVLFKDIETEVYELRKGAALLDKIGDFAPAWGMIGTLIGLIIMLQNL----QDTS 196
Query: 170 VSIPGIIESLISILLGLC----VSIP 191
G+ ++++ L G ++IP
Sbjct: 197 QIGTGMAVAMLTTLYGSVLANMIAIP 222
>gi|228914306|ref|ZP_04077921.1| Chemotaxis protein, MotA [Bacillus thuringiensis serovar pulsiensis
BGSC 4CC1]
gi|228845300|gb|EEM90336.1| Chemotaxis protein, MotA [Bacillus thuringiensis serovar pulsiensis
BGSC 4CC1]
Length = 277
Score = 42.1 bits (98), Expect = 0.060, Method: Composition-based stats.
Identities = 12/86 (13%), Positives = 39/86 (45%), Gaps = 8/86 (9%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
++ + ++ + E+ E+ + + L + G++G ++G++ Q++ +
Sbjct: 141 EEELKEVLMKDVETEVYELRKGAALLDKIGDFAPAWGMIGTLIGLIIMLQNL----QDTS 196
Query: 170 VSIPGIIESLISILLGLC----VSIP 191
G+ ++++ L G ++IP
Sbjct: 197 QIGTGMAVAMLTTLYGSVLANMIAIP 222
>gi|229160691|ref|ZP_04288683.1| Chemotaxis protein, MotA [Bacillus cereus R309803]
gi|228622706|gb|EEK79540.1| Chemotaxis protein, MotA [Bacillus cereus R309803]
Length = 289
Score = 42.1 bits (98), Expect = 0.060, Method: Composition-based stats.
Identities = 13/86 (15%), Positives = 39/86 (45%), Gaps = 8/86 (9%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
+D + ++ + E+ E+ + + L + G++G ++G++ Q++ +
Sbjct: 153 EDELKEVLMKDVETEVYELRKGATLLDKIGDFAPAWGMIGTLIGLIIMLQNL----QDTS 208
Query: 170 VSIPGIIESLISILLGLC----VSIP 191
G+ ++++ L G ++IP
Sbjct: 209 QIGTGMAVAMLTTLYGSVLANMIAIP 234
>gi|227815518|ref|YP_002815527.1| flagellar motor protein MotP [Bacillus anthracis str. CDC 684]
gi|227007728|gb|ACP17471.1| flagellar motor protein MotP [Bacillus anthracis str. CDC 684]
Length = 178
Score = 42.1 bits (98), Expect = 0.060, Method: Composition-based stats.
Identities = 12/86 (13%), Positives = 39/86 (45%), Gaps = 8/86 (9%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
++ + ++ + E+ E+ + + L + G++G ++G++ Q++ +
Sbjct: 42 EEELKEVLMKDVETEVYELRKGAALLDKIGDFAPAWGMIGTLIGLIIMLQNL----QDTS 97
Query: 170 VSIPGIIESLISILLGLC----VSIP 191
G+ ++++ L G ++IP
Sbjct: 98 QIGTGMAVAMLTTLYGSVLANMIAIP 123
>gi|163732482|ref|ZP_02139927.1| flagellar motor protein MotA [Roseobacter litoralis Och 149]
gi|161393842|gb|EDQ18166.1| flagellar motor protein MotA [Roseobacter litoralis Och 149]
Length = 289
Score = 42.1 bits (98), Expect = 0.060, Method: Composition-based stats.
Identities = 23/146 (15%), Positives = 52/146 (35%), Gaps = 16/146 (10%)
Query: 88 FMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGI 147
++ + + +S P +++ +++ M+ + + L +++ +GI
Sbjct: 123 AVALICDTLRSASMNYDDPHQVEEVLEKRMEANMHHAMHSSHA----LQTVADGLPALGI 178
Query: 148 LGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNK---FIEDSK 204
+ AVLG++ SI V I +L+ LG+ +AY F K
Sbjct: 179 VAAVLGIIKTMGSI---DQPPEVLGKLIGGALVGTFLGVF------LAYGFVGPFAAKVK 229
Query: 205 KFAMQMEGFANEFSAILSRQTEGNIS 230
+ F +L + +
Sbjct: 230 SVTEEDGHFYQLIREVLVANLHAHAT 255
>gi|85711189|ref|ZP_01042249.1| flagellar motor protein [Idiomarina baltica OS145]
gi|85695102|gb|EAQ33040.1| flagellar motor protein [Idiomarina baltica OS145]
Length = 255
Score = 42.1 bits (98), Expect = 0.060, Method: Composition-based stats.
Identities = 12/96 (12%), Positives = 40/96 (41%), Gaps = 5/96 (5%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ + + I+ E F ++ +G++G ++G++ ++ +
Sbjct: 119 EVVKHTLSKDISMSFTRHEEGARFFKILADVAPAMGMIGTLIGLVAMLANM----DDPKA 174
Query: 171 SIPGIIESLISILLGLCVS-IPSSIAYNKFIEDSKK 205
P + +L++ L G ++ + + NK + +++
Sbjct: 175 IGPAMSVALLTTLYGAFLANVIAIPIANKLVLRAEQ 210
>gi|153956380|ref|YP_001397145.1| hypothetical protein CKL_3789 [Clostridium kluyveri DSM 555]
gi|219856693|ref|YP_002473815.1| hypothetical protein CKR_3350 [Clostridium kluyveri NBRC 12016]
gi|146349238|gb|EDK35774.1| MotA [Clostridium kluyveri DSM 555]
gi|219570417|dbj|BAH08401.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 264
Score = 42.1 bits (98), Expect = 0.062, Method: Composition-based stats.
Identities = 11/79 (13%), Positives = 32/79 (40%), Gaps = 4/79 (5%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ ++++ + E + + S +GI+G V+G++ ++ +
Sbjct: 124 QAVRSILELELESTSERHRQGAAVFQSAGGYSPTMGIVGTVMGLVHVLGNL----EDPST 179
Query: 171 SIPGIIESLISILLGLCVS 189
P I + ++ L G+ +
Sbjct: 180 LGPKIAVAFLATLYGIGAA 198
>gi|152997426|ref|YP_001342261.1| MotA/TolQ/ExbB proton channel [Marinomonas sp. MWYL1]
gi|150838350|gb|ABR72326.1| MotA/TolQ/ExbB proton channel [Marinomonas sp. MWYL1]
Length = 245
Score = 42.1 bits (98), Expect = 0.063, Method: Composition-based stats.
Identities = 23/124 (18%), Positives = 51/124 (41%), Gaps = 6/124 (4%)
Query: 63 FWSGQSL-ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
F S ++L + + + L + + + + + A DR+ D A+
Sbjct: 74 FNSARALINNLAHKARRLSLLALESDVEALNNRFSNRALQMAIDGTDPDLLADRLHDDAV 133
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLIS 181
+ + + +SF+ S+ +GI+G+VLG++ ++ + GI + +S
Sbjct: 134 RIYDKRM-KSVSFIESIGGYAPTLGIMGSVLGLIQAMANL----DSPEALGHGIAVAFVS 188
Query: 182 ILLG 185
L G
Sbjct: 189 TLYG 192
>gi|288559962|ref|YP_003423448.1| MotA/TolQ/ExbB proton channel family protein [Methanobrevibacter
ruminantium M1]
gi|288542672|gb|ADC46556.1| MotA/TolQ/ExbB proton channel family protein [Methanobrevibacter
ruminantium M1]
Length = 212
Score = 42.1 bits (98), Expect = 0.064, Method: Composition-based stats.
Identities = 14/104 (13%), Positives = 46/104 (44%), Gaps = 4/104 (3%)
Query: 121 IARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP-GIIESL 179
I+ + + ++LS+ ++ G +G++G ++ M +A + +VV++ II +
Sbjct: 111 ISSREKRLEKRLSYTDIITRIGPTLGLMGTLIPMGP---GLAALGTGDVVTLSNAIIVAF 167
Query: 180 ISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
+ ++G+ + + ++ ++ + L++
Sbjct: 168 DTTVVGIGSGALAYVISKIRRRWYSEYINNIDVLTDVVLNKLNK 211
>gi|269836611|ref|YP_003318839.1| MotA/TolQ/ExbB proton channel [Sphaerobacter thermophilus DSM
20745]
gi|269785874|gb|ACZ38017.1| MotA/TolQ/ExbB proton channel [Sphaerobacter thermophilus DSM
20745]
Length = 268
Score = 42.1 bits (98), Expect = 0.064, Method: Composition-based stats.
Identities = 15/121 (12%), Positives = 40/121 (33%), Gaps = 4/121 (3%)
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
++ + + GL A+ + + + +++ I
Sbjct: 78 IDELVTLAEVARRDGLLALEDRVIDDPFLQRAVTLVVDGTDPEVTRAVLESDIEAMEARH 137
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCV 188
+M +GI+G V+G++ ++ S+ P I + ++ L G+
Sbjct: 138 ARGYGMFSTMGGFAPTMGIIGTVMGLIHVLSNL----SSPDELGPAIAVAFLATLYGVAS 193
Query: 189 S 189
+
Sbjct: 194 A 194
>gi|228938841|ref|ZP_04101441.1| Chemotaxis protein, MotA [Bacillus thuringiensis serovar berliner
ATCC 10792]
gi|228971722|ref|ZP_04132343.1| Chemotaxis protein, MotA [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228978331|ref|ZP_04138708.1| Chemotaxis protein, MotA [Bacillus thuringiensis Bt407]
gi|228781348|gb|EEM29549.1| Chemotaxis protein, MotA [Bacillus thuringiensis Bt407]
gi|228787812|gb|EEM35770.1| Chemotaxis protein, MotA [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228820690|gb|EEM66715.1| Chemotaxis protein, MotA [Bacillus thuringiensis serovar berliner
ATCC 10792]
Length = 277
Score = 42.1 bits (98), Expect = 0.064, Method: Composition-based stats.
Identities = 14/86 (16%), Positives = 39/86 (45%), Gaps = 8/86 (9%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
+D + ++ I E+ E+ + + L + G++G ++G++ Q++ +
Sbjct: 141 EDELKEVLLKDIETEVYELRKGAALLDKIGDFAPAWGMIGTLIGLIIMLQNL----QDTS 196
Query: 170 VSIPGIIESLISILLGLC----VSIP 191
G+ ++++ L G ++IP
Sbjct: 197 QIGTGMAVAMLTTLYGSVLANMIAIP 222
>gi|110677677|ref|YP_680684.1| flagellar motor protein MotA [Roseobacter denitrificans OCh 114]
gi|109453793|gb|ABG29998.1| chemotaxis MotA protein [Roseobacter denitrificans OCh 114]
Length = 289
Score = 42.1 bits (98), Expect = 0.064, Method: Composition-based stats.
Identities = 23/146 (15%), Positives = 52/146 (35%), Gaps = 16/146 (10%)
Query: 88 FMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGI 147
++ + + +S P +++ +++ M+ + + L +++ +GI
Sbjct: 123 AVALICDTLRSASMNYDDPHQVEEVLEKRMEANMHHAMHSSHA----LQTVADGLPALGI 178
Query: 148 LGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNK---FIEDSK 204
+ AVLG++ SI V I +L+ LG+ +AY F K
Sbjct: 179 VAAVLGIIKTMGSI---DQPPEVLGKLIGGALVGTFLGVF------LAYGFVGPFAAKVK 229
Query: 205 KFAMQMEGFANEFSAILSRQTEGNIS 230
+ F +L + +
Sbjct: 230 SVTEEDGHFYQLIREVLVANLHAHAT 255
>gi|146341586|ref|YP_001206634.1| putative chemotaxis protein MotA [Bradyrhizobium sp. ORS278]
gi|146194392|emb|CAL78417.1| putative chemotaxis protein MotA (Flagellar motor component)
[Bradyrhizobium sp. ORS278]
Length = 257
Score = 42.1 bits (98), Expect = 0.064, Method: Composition-based stats.
Identities = 17/126 (13%), Positives = 45/126 (35%), Gaps = 5/126 (3%)
Query: 65 SGQSL-ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAR 123
S + L + + + + G + E + + + I ++
Sbjct: 73 SARDLVDELARIAEIARKQGPVGLEKVETDEPFLAKGIRYVADGYDLEFIRDNLERDRDN 132
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISIL 183
L + E ++ G++G ++GM+ F ++ ++ P + +L++ L
Sbjct: 133 FLMHLDEGSKIYRAIGDCAPAFGMIGTLIGMVQMFANM----TDPSKLGPFMATALLATL 188
Query: 184 LGLCVS 189
G V+
Sbjct: 189 YGALVA 194
>gi|163939533|ref|YP_001644417.1| flagellar motor protein MotP [Bacillus weihenstephanensis KBAB4]
gi|229132540|ref|ZP_04261389.1| Chemotaxis protein, MotA [Bacillus cereus BDRD-ST196]
gi|229166568|ref|ZP_04294320.1| Chemotaxis protein, MotA [Bacillus cereus AH621]
gi|163861730|gb|ABY42789.1| MotA/TolQ/ExbB proton channel [Bacillus weihenstephanensis KBAB4]
gi|228616822|gb|EEK73895.1| Chemotaxis protein, MotA [Bacillus cereus AH621]
gi|228650886|gb|EEL06872.1| Chemotaxis protein, MotA [Bacillus cereus BDRD-ST196]
Length = 277
Score = 42.1 bits (98), Expect = 0.064, Method: Composition-based stats.
Identities = 29/198 (14%), Positives = 70/198 (35%), Gaps = 35/198 (17%)
Query: 21 GLAVKCIITLLFIF----------------SIL------SWSVIIQ-KSVNFITLRRQFR 57
G+ V +I + I SIL + ++I+ + +
Sbjct: 25 GIVVGFVILIAAIMLGGGGIKAFKNFLDVSSILIVIGGTTATIIVAYRFGEIKKYTKSI- 83
Query: 58 EFEQLFWSGQSLETV----CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRI 113
F L ++LE + K GL ++ + KG R + D
Sbjct: 84 -FTVLHRREENLEQLTDLFVDFSKKSKKHGLLSLEVDGEQVDNPFIQKGIRLMLSGYDEA 142
Query: 114 D--RMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVS 171
+ ++ + E+ E+ + + L + G++G ++G++ Q++ +
Sbjct: 143 ELKEVLMRDVETEVYELRKGATLLDKIGDFAPAWGMIGTLIGLIIMLQNL----QDTSQI 198
Query: 172 IPGIIESLISILLGLCVS 189
G+ ++++ L G ++
Sbjct: 199 GTGMAVAMLTTLYGSVIA 216
>gi|229096213|ref|ZP_04227186.1| Chemotaxis protein, MotA [Bacillus cereus Rock3-29]
gi|229102325|ref|ZP_04233034.1| Chemotaxis protein, MotA [Bacillus cereus Rock3-28]
gi|228681226|gb|EEL35394.1| Chemotaxis protein, MotA [Bacillus cereus Rock3-28]
gi|228687173|gb|EEL41078.1| Chemotaxis protein, MotA [Bacillus cereus Rock3-29]
Length = 277
Score = 42.1 bits (98), Expect = 0.065, Method: Composition-based stats.
Identities = 14/86 (16%), Positives = 39/86 (45%), Gaps = 8/86 (9%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
+D + ++ I E+ E+ + + L + G++G ++G++ Q++ +
Sbjct: 141 EDELKEVLMKDIETEVYELRKGATLLDKIGDFAPAWGMIGTLIGLIIMLQNL----QDTS 196
Query: 170 VSIPGIIESLISILLGLC----VSIP 191
G+ ++++ L G ++IP
Sbjct: 197 QIGTGMAVAMLTTLYGSVLANMIAIP 222
>gi|118477163|ref|YP_894314.1| flagellar motor protein MotP [Bacillus thuringiensis str. Al Hakam]
gi|118416388|gb|ABK84807.1| chemotaxis protein, MotA [Bacillus thuringiensis str. Al Hakam]
Length = 284
Score = 42.1 bits (98), Expect = 0.065, Method: Composition-based stats.
Identities = 12/86 (13%), Positives = 39/86 (45%), Gaps = 8/86 (9%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
++ + ++ + E+ E+ + + L + G++G ++G++ Q++ +
Sbjct: 148 EEELKEVLMKDVETEVYELRKGAALLDKIGDFAPAWGMIGTLIGLIIMLQNL----QDTS 203
Query: 170 VSIPGIIESLISILLGLC----VSIP 191
G+ ++++ L G ++IP
Sbjct: 204 QIGTGMAVAMLTTLYGSVLANMIAIP 229
>gi|330445279|ref|ZP_08308931.1| motA/TolQ/ExbB proton channel family protein [Photobacterium
leiognathi subsp. mandapamensis svers.1.1.]
gi|328489470|dbj|GAA03428.1| motA/TolQ/ExbB proton channel family protein [Photobacterium
leiognathi subsp. mandapamensis svers.1.1.]
Length = 215
Score = 42.1 bits (98), Expect = 0.066, Method: Composition-based stats.
Identities = 14/85 (16%), Positives = 35/85 (41%), Gaps = 8/85 (9%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ + + I+ E + + S +G++G ++G++ ++ +
Sbjct: 81 EVVRGTLQKDISLTNERHEQGVGIFSSFGDVAPAMGMIGTLIGLVAMLSNM----DDPKS 136
Query: 171 SIPGIIESLISILLG--LC--VSIP 191
P + +L++ L G L V+IP
Sbjct: 137 IGPAMAVALLTTLYGSMLANMVAIP 161
>gi|229115168|ref|ZP_04244578.1| Chemotaxis protein, MotA [Bacillus cereus Rock1-3]
gi|228668308|gb|EEL23740.1| Chemotaxis protein, MotA [Bacillus cereus Rock1-3]
Length = 277
Score = 42.1 bits (98), Expect = 0.066, Method: Composition-based stats.
Identities = 14/86 (16%), Positives = 39/86 (45%), Gaps = 8/86 (9%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
+D + ++ I E+ E+ + + L + G++G ++G++ Q++ +
Sbjct: 141 EDELKEVLMKDIETEVYELRKGATLLDKIGDFAPAWGMIGTLIGLIIMLQNL----QDTS 196
Query: 170 VSIPGIIESLISILLGLC----VSIP 191
G+ ++++ L G ++IP
Sbjct: 197 QIGTGMAVAMLTTLYGSVLANMIAIP 222
>gi|255022044|ref|ZP_05294050.1| Flagellar motor component [Acidithiobacillus caldus ATCC 51756]
gi|254968530|gb|EET26086.1| Flagellar motor component [Acidithiobacillus caldus ATCC 51756]
Length = 227
Score = 42.1 bits (98), Expect = 0.068, Method: Composition-based stats.
Identities = 24/158 (15%), Positives = 57/158 (36%), Gaps = 12/158 (7%)
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
L + + + + L A+ + ++ + A G I R + + + + E
Sbjct: 45 LIELAHKSRKYGLLSLDALIDDIEDPFMRNGLRMAVDGTGTTT-IMRTLRLRLHTQTELD 103
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCV 188
+ GI+GAV G++ ++ + GI + +S + GL +
Sbjct: 104 MMAAGLFEAAGGYAPTFGIMGAVTGLIEVMHHLSHPSELGM----GIAAAFVSTVYGLVL 159
Query: 189 S----IPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
+ IP++ N+ + + F + I++
Sbjct: 160 ANVFCIPTA---NRLRTVIAEQLVARNVFMDALHGIVT 194
>gi|118443368|ref|YP_877985.1| chemotaxis motA protein [Clostridium novyi NT]
gi|118133824|gb|ABK60868.1| chemotaxis motA protein [Clostridium novyi NT]
Length = 269
Score = 42.1 bits (98), Expect = 0.068, Method: Composition-based stats.
Identities = 12/79 (15%), Positives = 35/79 (44%), Gaps = 4/79 (5%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ I ++++ I + + L + + G+LG ++G++ ++ +
Sbjct: 125 ETIREILELEIGEMEKRHKDGADVLKAWAGYAPAFGMLGTLIGLIQMLANL----DDPGN 180
Query: 171 SIPGIIESLISILLGLCVS 189
PG+ ++LI+ G ++
Sbjct: 181 LGPGMSKALITTFYGSLIA 199
>gi|206970702|ref|ZP_03231654.1| putative chemotaxis protein MotA [Bacillus cereus AH1134]
gi|218231406|ref|YP_002366412.1| flagellar motor protein MotP [Bacillus cereus B4264]
gi|218896659|ref|YP_002445070.1| putative chemotaxis protein MotA [Bacillus cereus G9842]
gi|228900308|ref|ZP_04064538.1| Chemotaxis protein, MotA [Bacillus thuringiensis IBL 4222]
gi|228907360|ref|ZP_04071218.1| Chemotaxis protein, MotA [Bacillus thuringiensis IBL 200]
gi|228958006|ref|ZP_04119743.1| Chemotaxis protein, MotA [Bacillus thuringiensis serovar pakistani
str. T13001]
gi|228964709|ref|ZP_04125816.1| Chemotaxis protein, MotA [Bacillus thuringiensis serovar sotto str.
T04001]
gi|229109184|ref|ZP_04238783.1| Chemotaxis protein, MotA [Bacillus cereus Rock1-15]
gi|229127053|ref|ZP_04256052.1| Chemotaxis protein, MotA [Bacillus cereus BDRD-Cer4]
gi|229144339|ref|ZP_04272745.1| Chemotaxis protein, MotA [Bacillus cereus BDRD-ST24]
gi|229149928|ref|ZP_04278156.1| Chemotaxis protein, MotA [Bacillus cereus m1550]
gi|229178136|ref|ZP_04305507.1| Chemotaxis protein, MotA [Bacillus cereus 172560W]
gi|296502309|ref|YP_003664009.1| flagellar motor protein MotP [Bacillus thuringiensis BMB171]
gi|206734338|gb|EDZ51508.1| putative chemotaxis protein MotA [Bacillus cereus AH1134]
gi|218159363|gb|ACK59355.1| putative chemotaxis protein MotA [Bacillus cereus B4264]
gi|218545199|gb|ACK97593.1| putative chemotaxis protein MotA [Bacillus cereus G9842]
gi|228605266|gb|EEK62716.1| Chemotaxis protein, MotA [Bacillus cereus 172560W]
gi|228633609|gb|EEK90210.1| Chemotaxis protein, MotA [Bacillus cereus m1550]
gi|228639126|gb|EEK95550.1| Chemotaxis protein, MotA [Bacillus cereus BDRD-ST24]
gi|228656406|gb|EEL12245.1| Chemotaxis protein, MotA [Bacillus cereus BDRD-Cer4]
gi|228674194|gb|EEL29439.1| Chemotaxis protein, MotA [Bacillus cereus Rock1-15]
gi|228794959|gb|EEM42458.1| Chemotaxis protein, MotA [Bacillus thuringiensis serovar sotto str.
T04001]
gi|228801713|gb|EEM48593.1| Chemotaxis protein, MotA [Bacillus thuringiensis serovar pakistani
str. T13001]
gi|228852221|gb|EEM97017.1| Chemotaxis protein, MotA [Bacillus thuringiensis IBL 200]
gi|228859343|gb|EEN03773.1| Chemotaxis protein, MotA [Bacillus thuringiensis IBL 4222]
gi|296323361|gb|ADH06289.1| flagellar motor protein MotP [Bacillus thuringiensis BMB171]
Length = 277
Score = 42.1 bits (98), Expect = 0.069, Method: Composition-based stats.
Identities = 14/86 (16%), Positives = 39/86 (45%), Gaps = 8/86 (9%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
+D + ++ I E+ E+ + + L + G++G ++G++ Q++ +
Sbjct: 141 EDELKEVLLKDIETEVYELRKGAALLDKIGDFAPAWGMIGTLIGLIIMLQNL----QDTS 196
Query: 170 VSIPGIIESLISILLGLC----VSIP 191
G+ ++++ L G ++IP
Sbjct: 197 QIGTGMAVAMLTTLYGSVLANMIAIP 222
>gi|42528266|ref|NP_973364.1| motility protein A [Treponema denticola ATCC 35405]
gi|4426945|gb|AAD20619.1| flagellar motor protein MotA [Treponema denticola]
gi|41819536|gb|AAS13283.1| motility protein A [Treponema denticola ATCC 35405]
gi|325474544|gb|EGC77730.1| flagellar motor protein MotA [Treponema denticola F0402]
Length = 259
Score = 41.7 bits (97), Expect = 0.069, Method: Composition-based stats.
Identities = 20/106 (18%), Positives = 46/106 (43%), Gaps = 11/106 (10%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ I +M+ + + E +S + + ++ G+LG V+G++G ++ +
Sbjct: 121 EAIRSLMENELNQMEERHNTWISLVNAWATLAPGFGMLGTVIGLIGMLLNL----DDKTA 176
Query: 171 SIPGIIESLISILLG------LCVSIPSSIAY-NKFIEDSKKFAMQ 209
P + +L++ G L V I + + Y N SK+ ++
Sbjct: 177 LGPNMATALVTTFYGSLMQNWLLVPIATKLMYQNNMEVKSKEMIIE 222
>gi|229069279|ref|ZP_04202569.1| Chemotaxis protein, MotA [Bacillus cereus F65185]
gi|229078909|ref|ZP_04211461.1| Chemotaxis protein, MotA [Bacillus cereus Rock4-2]
gi|228704323|gb|EEL56757.1| Chemotaxis protein, MotA [Bacillus cereus Rock4-2]
gi|228713766|gb|EEL65651.1| Chemotaxis protein, MotA [Bacillus cereus F65185]
Length = 277
Score = 41.7 bits (97), Expect = 0.070, Method: Composition-based stats.
Identities = 14/86 (16%), Positives = 39/86 (45%), Gaps = 8/86 (9%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
+D + ++ I E+ E+ + + L + G++G ++G++ Q++ +
Sbjct: 141 EDELKEVLLKDIETEVYELRKGAALLDKIGDFAPAWGMIGTLIGLIIMLQNL----QDTS 196
Query: 170 VSIPGIIESLISILLGLC----VSIP 191
G+ ++++ L G ++IP
Sbjct: 197 QIGTGMAVAMLTTLYGSVLANMIAIP 222
>gi|229172374|ref|ZP_04299933.1| Chemotaxis protein, MotA [Bacillus cereus MM3]
gi|228610845|gb|EEK68108.1| Chemotaxis protein, MotA [Bacillus cereus MM3]
Length = 277
Score = 41.7 bits (97), Expect = 0.070, Method: Composition-based stats.
Identities = 13/86 (15%), Positives = 39/86 (45%), Gaps = 8/86 (9%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
+D + ++ + E+ E+ + + L + G++G ++G++ Q++ +
Sbjct: 141 EDELKEVLMKDVETEVYELRKGAALLDKIGDFAPAWGMIGTLIGLIIMLQNL----QDTS 196
Query: 170 VSIPGIIESLISILLGLC----VSIP 191
G+ ++++ L G ++IP
Sbjct: 197 QIGTGMAVAMLTTLYGSVLANMIAIP 222
>gi|196038956|ref|ZP_03106263.1| putative chemotaxis protein MotA [Bacillus cereus NVH0597-99]
gi|228945330|ref|ZP_04107685.1| Chemotaxis protein, MotA [Bacillus thuringiensis serovar monterrey
BGSC 4AJ1]
gi|229090686|ref|ZP_04221919.1| Chemotaxis protein, MotA [Bacillus cereus Rock3-42]
gi|196030101|gb|EDX68701.1| putative chemotaxis protein MotA [Bacillus cereus NVH0597-99]
gi|228692628|gb|EEL46354.1| Chemotaxis protein, MotA [Bacillus cereus Rock3-42]
gi|228814302|gb|EEM60568.1| Chemotaxis protein, MotA [Bacillus thuringiensis serovar monterrey
BGSC 4AJ1]
Length = 277
Score = 41.7 bits (97), Expect = 0.070, Method: Composition-based stats.
Identities = 13/86 (15%), Positives = 39/86 (45%), Gaps = 8/86 (9%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
+D + ++ + E+ E+ + + L + G++G ++G++ Q++ +
Sbjct: 141 EDELKEVLMKDVETEVYELRKGAALLDKIGDFAPAWGMIGTLIGLIIMLQNL----QDTS 196
Query: 170 VSIPGIIESLISILLGLC----VSIP 191
G+ ++++ L G ++IP
Sbjct: 197 QIGTGMAVAMLTTLYGSVLANMIAIP 222
>gi|228952107|ref|ZP_04114202.1| Chemotaxis protein, MotA [Bacillus thuringiensis serovar kurstaki
str. T03a001]
gi|228807639|gb|EEM54163.1| Chemotaxis protein, MotA [Bacillus thuringiensis serovar kurstaki
str. T03a001]
Length = 277
Score = 41.7 bits (97), Expect = 0.071, Method: Composition-based stats.
Identities = 14/86 (16%), Positives = 39/86 (45%), Gaps = 8/86 (9%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
+D + ++ I E+ E+ + + L + G++G ++G++ Q++ +
Sbjct: 141 EDELKEVLLKDIETEVYELRKGAALLDKIGDFAPAWGMIGTLIGLIIMLQNL----QDTS 196
Query: 170 VSIPGIIESLISILLGLC----VSIP 191
G+ ++++ L G ++IP
Sbjct: 197 QIGTGMAVAMLTTLYGSVLANMIAIP 222
>gi|225863586|ref|YP_002748964.1| putative chemotaxis protein MotA [Bacillus cereus 03BB102]
gi|225788831|gb|ACO29048.1| putative chemotaxis protein MotA [Bacillus cereus 03BB102]
Length = 277
Score = 41.7 bits (97), Expect = 0.071, Method: Composition-based stats.
Identities = 12/86 (13%), Positives = 39/86 (45%), Gaps = 8/86 (9%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
++ + ++ + E+ E+ + + L + G++G ++G++ Q++ +
Sbjct: 141 EEELKEVLMKDVETEVYELRKGAALLDKIGDFAPAWGMIGTLIGLIIMLQNL----QDTS 196
Query: 170 VSIPGIIESLISILLGLC----VSIP 191
G+ ++++ L G ++IP
Sbjct: 197 QIGTGMAVAMLTTLYGSVLANMIAIP 222
>gi|196045128|ref|ZP_03112361.1| putative chemotaxis protein MotA [Bacillus cereus 03BB108]
gi|229183919|ref|ZP_04311135.1| Chemotaxis protein, MotA [Bacillus cereus BGSC 6E1]
gi|196024130|gb|EDX62804.1| putative chemotaxis protein MotA [Bacillus cereus 03BB108]
gi|228599571|gb|EEK57175.1| Chemotaxis protein, MotA [Bacillus cereus BGSC 6E1]
Length = 277
Score = 41.7 bits (97), Expect = 0.071, Method: Composition-based stats.
Identities = 12/86 (13%), Positives = 39/86 (45%), Gaps = 8/86 (9%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
++ + ++ + E+ E+ + + L + G++G ++G++ Q++ +
Sbjct: 141 EEELKEVLMKDVETEVYELRKGAALLDKIGDFAPAWGMIGTLIGLIIMLQNL----QDTS 196
Query: 170 VSIPGIIESLISILLGLC----VSIP 191
G+ ++++ L G ++IP
Sbjct: 197 QIGTGMAVAMLTTLYGSVLANMIAIP 222
>gi|116872074|ref|YP_848855.1| flagellar motor protein MotA [Listeria welshimeri serovar 6b str.
SLCC5334]
gi|116740952|emb|CAK20072.1| chemotaxis (flagellar motor rotation) protein MotA [Listeria
welshimeri serovar 6b str. SLCC5334]
Length = 279
Score = 41.7 bits (97), Expect = 0.071, Method: Composition-based stats.
Identities = 16/132 (12%), Positives = 40/132 (30%), Gaps = 7/132 (5%)
Query: 73 CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKL 132
++ + L + K + + + +++ +A E
Sbjct: 86 ADEIRRSGVLALEDSVDEIEDPFMKRGMRLVVDGQSSPEFLRDVLEEEVASMEERHAAYA 145
Query: 133 SFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPS 192
S + +G+LGA +G++ + SN I + + + G+
Sbjct: 146 KIFASAGAYAPTLGVLGAAMGLIHAMGEM----SNPDKLSEAIAAAFVCTIFGIFTG--- 198
Query: 193 SIAYNKFIEDSK 204
+ + F K
Sbjct: 199 YVLWTPFANKLK 210
>gi|52143731|ref|YP_083098.1| flagellar motor protein MotP [Bacillus cereus E33L]
gi|51977200|gb|AAU18750.1| chemotaxis protein [Bacillus cereus E33L]
Length = 277
Score = 41.7 bits (97), Expect = 0.071, Method: Composition-based stats.
Identities = 12/86 (13%), Positives = 39/86 (45%), Gaps = 8/86 (9%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
++ + ++ + E+ E+ + + L + G++G ++G++ Q++ +
Sbjct: 141 EEELKEVLMKDVETEVYELRKGAALLDKIGDFAPAWGMIGTLIGLIIMLQNL----QDTS 196
Query: 170 VSIPGIIESLISILLGLC----VSIP 191
G+ ++++ L G ++IP
Sbjct: 197 QIGTGMAVAMLTTLYGSVLANMIAIP 222
>gi|75760653|ref|ZP_00740681.1| Chemotaxis motA protein [Bacillus thuringiensis serovar israelensis
ATCC 35646]
gi|74491867|gb|EAO55055.1| Chemotaxis motA protein [Bacillus thuringiensis serovar israelensis
ATCC 35646]
Length = 277
Score = 41.7 bits (97), Expect = 0.071, Method: Composition-based stats.
Identities = 14/86 (16%), Positives = 39/86 (45%), Gaps = 8/86 (9%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
+D + ++ I E+ E+ + + L + G++G ++G++ Q++ +
Sbjct: 141 EDELKEVLLKDIETEVYELRKGAALLDKIGDFAPAWGMIGTLIGLIIMLQNL----QDTS 196
Query: 170 VSIPGIIESLISILLGLC----VSIP 191
G+ ++++ L G ++IP
Sbjct: 197 QIGTGMAVAMLTTLYGSVLANMIAIP 222
>gi|228920438|ref|ZP_04083783.1| Chemotaxis protein, MotA [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228839068|gb|EEM84364.1| Chemotaxis protein, MotA [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
Length = 277
Score = 41.7 bits (97), Expect = 0.071, Method: Composition-based stats.
Identities = 14/86 (16%), Positives = 39/86 (45%), Gaps = 8/86 (9%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
+D + ++ I E+ E+ + + L + G++G ++G++ Q++ +
Sbjct: 141 EDELKEVLLKDIETEVYELRKGAALLDKIGDFAPAWGMIGTLIGLIIMLQNL----QDTS 196
Query: 170 VSIPGIIESLISILLGLC----VSIP 191
G+ ++++ L G ++IP
Sbjct: 197 QIGTGMAVAMLTTLYGSVLANMIAIP 222
>gi|196033497|ref|ZP_03100909.1| putative chemotaxis protein MotA [Bacillus cereus W]
gi|195993931|gb|EDX57887.1| putative chemotaxis protein MotA [Bacillus cereus W]
Length = 277
Score = 41.7 bits (97), Expect = 0.071, Method: Composition-based stats.
Identities = 12/86 (13%), Positives = 39/86 (45%), Gaps = 8/86 (9%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
++ + ++ + E+ E+ + + L + G++G ++G++ Q++ +
Sbjct: 141 EEELKEVLMKDVETEVYELRKGAALLDKIGDFAPAWGMIGTLIGLIIMLQNL----QDTS 196
Query: 170 VSIPGIIESLISILLGLC----VSIP 191
G+ ++++ L G ++IP
Sbjct: 197 QIGTGMAVAMLTTLYGSVLANMIAIP 222
>gi|85715413|ref|ZP_01046395.1| MotA/TolQ/ExbB proton channel [Nitrobacter sp. Nb-311A]
gi|85697834|gb|EAQ35709.1| MotA/TolQ/ExbB proton channel [Nitrobacter sp. Nb-311A]
Length = 257
Score = 41.7 bits (97), Expect = 0.072, Method: Composition-based stats.
Identities = 17/126 (13%), Positives = 46/126 (36%), Gaps = 5/126 (3%)
Query: 65 SGQSL-ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAR 123
S + L + + + + G + +E + + + I ++
Sbjct: 73 SARDLVDELARIAEIARKQGPVGLEKVETNEPFLAKGIRFVADGYDLEFIRDNLERDRDN 132
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISIL 183
L + E ++ G++G ++GM+ F ++ ++ P + +L++ L
Sbjct: 133 FLMHLDEGSKIYRAIGDCAPAFGMIGTLIGMVQMFANM----TDPSKLGPFMATALLATL 188
Query: 184 LGLCVS 189
G V+
Sbjct: 189 YGALVA 194
>gi|313610150|gb|EFR85460.1| chemotaxis protein MotA [Listeria monocytogenes FSL F2-208]
Length = 283
Score = 41.7 bits (97), Expect = 0.074, Method: Composition-based stats.
Identities = 16/132 (12%), Positives = 40/132 (30%), Gaps = 7/132 (5%)
Query: 73 CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKL 132
++ + L + K + + + +++ +A E
Sbjct: 86 ADEIRRSGVLALEDSVDEIEDPFMKRGMRLVVDGQSSPEFLRDVLEEEVASMEERHAAYA 145
Query: 133 SFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPS 192
S + +G+LGA +G++ + SN I + + + G+
Sbjct: 146 KIFASAGAYAPTLGVLGAAMGLIHAMGEM----SNPDKLSEAIAAAFVCTIFGIFTG--- 198
Query: 193 SIAYNKFIEDSK 204
+ + F K
Sbjct: 199 YVLWTPFANKLK 210
>gi|290893980|ref|ZP_06556955.1| motility protein [Listeria monocytogenes FSL J2-071]
gi|315281339|ref|ZP_07869985.1| chemotaxis protein MotA [Listeria marthii FSL S4-120]
gi|290556426|gb|EFD89965.1| motility protein [Listeria monocytogenes FSL J2-071]
gi|313615015|gb|EFR88513.1| chemotaxis protein MotA [Listeria marthii FSL S4-120]
Length = 283
Score = 41.7 bits (97), Expect = 0.074, Method: Composition-based stats.
Identities = 16/132 (12%), Positives = 40/132 (30%), Gaps = 7/132 (5%)
Query: 73 CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKL 132
++ + L + K + + + +++ +A E
Sbjct: 86 ADEIRRSGVLALEDSVDEIEDPFMKRGMRLVVDGQSSPEFLRDVLEEEVASMEERHAAYA 145
Query: 133 SFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPS 192
S + +G+LGA +G++ + SN I + + + G+
Sbjct: 146 KIFASAGAYAPTLGVLGAAMGLIHAMGEM----SNPDKLSEAIAAAFVCTIFGIFTG--- 198
Query: 193 SIAYNKFIEDSK 204
+ + F K
Sbjct: 199 YVLWTPFANKLK 210
>gi|86750475|ref|YP_486971.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris HaA2]
gi|86573503|gb|ABD08060.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris HaA2]
Length = 257
Score = 41.7 bits (97), Expect = 0.074, Method: Composition-based stats.
Identities = 17/126 (13%), Positives = 44/126 (34%), Gaps = 5/126 (3%)
Query: 65 SGQSL-ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAR 123
S + L + + + + G + + + + + I ++
Sbjct: 73 SARDLVDELARIAEIARKSGPVGLEKVEADDPFLAKGIRYVADGYDLEFIRDNLERDRDN 132
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISIL 183
L + E ++ G++G +LGM+ F ++ + P + +L++ L
Sbjct: 133 FLLHLNEGSKIYRAIGDCAPAFGMIGTLLGMVQMFSNM----QDPSKLGPFMAVALLATL 188
Query: 184 LGLCVS 189
G V+
Sbjct: 189 YGAVVA 194
>gi|89100892|ref|ZP_01173741.1| flagellar motor protein [Bacillus sp. NRRL B-14911]
gi|89084379|gb|EAR63531.1| flagellar motor protein [Bacillus sp. NRRL B-14911]
Length = 264
Score = 41.7 bits (97), Expect = 0.074, Method: Composition-based stats.
Identities = 18/99 (18%), Positives = 38/99 (38%), Gaps = 7/99 (7%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
D I ++ I E + + +G+LGAV+G++ + +N
Sbjct: 123 DYIRDVLSEEIESMEERHLSGAAIFTQAGTYAPTLGVLGAVVGLIAALGDM----TNTDA 178
Query: 171 SIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQ 209
I + ++ LLG+ + ++ F K+ + Q
Sbjct: 179 LGHAISAAFVATLLGIFTG---YVLWHPFANKLKRKSKQ 214
>gi|16802727|ref|NP_464212.1| flagellar motor protein MotA [Listeria monocytogenes EGD-e]
gi|46906936|ref|YP_013325.1| flagellar motor protein MotA [Listeria monocytogenes serotype 4b
str. F2365]
gi|47095251|ref|ZP_00232862.1| chemotaxis protein MotA [Listeria monocytogenes str. 1/2a F6854]
gi|224498767|ref|ZP_03667116.1| flagellar motor protein MotA [Listeria monocytogenes Finland 1988]
gi|224502010|ref|ZP_03670317.1| flagellar motor protein MotA [Listeria monocytogenes FSL R2-561]
gi|226223316|ref|YP_002757423.1| motility protein (flagellar motor rotation) MotA [Listeria
monocytogenes Clip81459]
gi|254829342|ref|ZP_05234029.1| motility protein [Listeria monocytogenes FSL N3-165]
gi|254830324|ref|ZP_05234979.1| flagellar motor protein MotA [Listeria monocytogenes 10403S]
gi|254853111|ref|ZP_05242459.1| motility protein [Listeria monocytogenes FSL R2-503]
gi|254900079|ref|ZP_05260003.1| flagellar motor protein MotA [Listeria monocytogenes J0161]
gi|254911368|ref|ZP_05261380.1| flagellar motor protein MotA [Listeria monocytogenes J2818]
gi|254935695|ref|ZP_05267392.1| motility protein [Listeria monocytogenes F6900]
gi|254993371|ref|ZP_05275561.1| flagellar motor protein MotA [Listeria monocytogenes FSL J2-064]
gi|255026596|ref|ZP_05298582.1| flagellar motor protein MotA [Listeria monocytogenes FSL J2-003]
gi|255028360|ref|ZP_05300311.1| flagellar motor protein MotA [Listeria monocytogenes LO28]
gi|284801015|ref|YP_003412880.1| flagellar motor protein MotA [Listeria monocytogenes 08-5578]
gi|284994157|ref|YP_003415925.1| flagellar motor protein MotA [Listeria monocytogenes 08-5923]
gi|300764497|ref|ZP_07074490.1| chemotaxis protein MotA [Listeria monocytogenes FSL N1-017]
gi|5305455|gb|AAD41659.1| motility protein [Listeria monocytogenes]
gi|16410074|emb|CAC98763.1| lmo0685 [Listeria monocytogenes EGD-e]
gi|46880202|gb|AAT03502.1| chemotaxis protein MotA [Listeria monocytogenes serotype 4b str.
F2365]
gi|47016322|gb|EAL07244.1| chemotaxis protein MotA [Listeria monocytogenes str. 1/2a F6854]
gi|225875778|emb|CAS04481.1| Putative motility protein (flagellar motor rotation) MotA [Listeria
monocytogenes serotype 4b str. CLIP 80459]
gi|258601754|gb|EEW15079.1| motility protein [Listeria monocytogenes FSL N3-165]
gi|258606461|gb|EEW19069.1| motility protein [Listeria monocytogenes FSL R2-503]
gi|258608277|gb|EEW20885.1| motility protein [Listeria monocytogenes F6900]
gi|284056577|gb|ADB67518.1| flagellar motor protein MotA [Listeria monocytogenes 08-5578]
gi|284059624|gb|ADB70563.1| flagellar motor protein MotA [Listeria monocytogenes 08-5923]
gi|293589304|gb|EFF97638.1| flagellar motor protein MotA [Listeria monocytogenes J2818]
gi|300514851|gb|EFK41905.1| chemotaxis protein MotA [Listeria monocytogenes FSL N1-017]
Length = 283
Score = 41.7 bits (97), Expect = 0.074, Method: Composition-based stats.
Identities = 16/132 (12%), Positives = 40/132 (30%), Gaps = 7/132 (5%)
Query: 73 CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKL 132
++ + L + K + + + +++ +A E
Sbjct: 86 ADEIRRSGVLALEDSVDEIEDPFMKRGMRLVVDGQSSPEFLRDVLEEEVASMEERHAAYA 145
Query: 133 SFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPS 192
S + +G+LGA +G++ + SN I + + + G+
Sbjct: 146 KIFASAGAYAPTLGVLGAAMGLIHAMGEM----SNPDKLSEAIAAAFVCTIFGIFTG--- 198
Query: 193 SIAYNKFIEDSK 204
+ + F K
Sbjct: 199 YVLWTPFANKLK 210
>gi|302670730|ref|YP_003830690.1| flagellar motor protein MotA [Butyrivibrio proteoclasticus B316]
gi|302395203|gb|ADL34108.1| flagellar motor protein MotA [Butyrivibrio proteoclasticus B316]
Length = 267
Score = 41.7 bits (97), Expect = 0.075, Method: Composition-based stats.
Identities = 16/79 (20%), Positives = 36/79 (45%), Gaps = 4/79 (5%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ + +++ I E SF G ++ G G++G +LG++ Q++ S+
Sbjct: 124 ELVKSILEAEIDAMSERHKSNYSFFGDLAGMGPSWGMIGTLLGLVLMLQNM----SDPSS 179
Query: 171 SIPGIIESLISILLGLCVS 189
P + +LI+ G ++
Sbjct: 180 IGPSMAVALITTFYGSVLA 198
>gi|212636368|ref|YP_002312893.1| flagellar motor protein PomA [Shewanella piezotolerans WP3]
gi|212557852|gb|ACJ30306.1| MotA/TolQ/ExbB proton channel [Shewanella piezotolerans WP3]
Length = 255
Score = 41.7 bits (97), Expect = 0.075, Method: Composition-based stats.
Identities = 13/79 (16%), Positives = 34/79 (43%), Gaps = 4/79 (5%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
D + ++ IA + + S+ +G++G ++G++G ++ +
Sbjct: 119 DVVRDALEKDIALTEQRHKTGVGIFKSIGDVAPAMGMIGTLIGLVGMLSNM----DDPKS 174
Query: 171 SIPGIIESLISILLGLCVS 189
P + +L++ L G V+
Sbjct: 175 IGPAMAVALLTTLYGAVVA 193
>gi|157963145|ref|YP_001503179.1| MotA/TolQ/ExbB proton channel [Shewanella pealeana ATCC 700345]
gi|157848145|gb|ABV88644.1| MotA/TolQ/ExbB proton channel [Shewanella pealeana ATCC 700345]
Length = 258
Score = 41.7 bits (97), Expect = 0.075, Method: Composition-based stats.
Identities = 28/184 (15%), Positives = 70/184 (38%), Gaps = 18/184 (9%)
Query: 29 TLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIF 88
LFI + L +I+++ + + ++ W L + + ++ +
Sbjct: 18 WPLFICAFLGLMIILERLALLL-----YELPKRDSW----LTQLRQQARSATPEQRQQLM 68
Query: 89 MSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI-----ARELEEITEKLSFLGSMSSAGL 143
+S+ + KG + ++ R M I ++ ++ L L +
Sbjct: 69 TQ-ISQGRSMLAKGTALLLSHGEQ-SRAMREEIVSLWLVKQKSKLLSGLKILHIIGVITP 126
Query: 144 LVGILGAVLGMMGFFQSIAGYYS--NNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIE 201
L+G+LG VLG++ F + G+ ++ + GL +++P+ + F
Sbjct: 127 LLGLLGTVLGLIEMFNQLGLSDGPVTPSQLASGLGLAMNTTAAGLIIAVPAITMAHLFTL 186
Query: 202 DSKK 205
+++
Sbjct: 187 WAER 190
>gi|42491187|emb|CAD43042.1| ExbB protein [Listonella anguillarum serovar O1]
Length = 235
Score = 41.7 bits (97), Expect = 0.075, Method: Composition-based stats.
Identities = 31/190 (16%), Positives = 68/190 (35%), Gaps = 16/190 (8%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAI 87
LF+ S L+ +I ++ + + G +L + + N
Sbjct: 15 AWPLFVCSALATMIITERLFQVLLSLGVGKGAI-----GSALNQI-----SPTNTAQIEA 64
Query: 88 FMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVA----IARELEEITEKLSFLGSMSSAGL 143
S S + KG + D + + A + + ++ L L +
Sbjct: 65 LASEFSSKRPLLYKGVAMLLAHHDFSKGLREDAAGIWLQEKRHQLHSGLRILSLIGVISP 124
Query: 144 LVGILGAVLGMMGFFQSIAGYYSNNV--VSIPGIIESLISILLGLCVSIPSSIAYNKFIE 201
L+G+LG VLG++ F+ +A N G+ ++ + GL +++P+
Sbjct: 125 LLGLLGTVLGLIEMFKGVALSSGNITPNDLADGLGIAMRTTAAGLLIALPAITGAQLLGV 184
Query: 202 DSKKFAMQME 211
+ + ++E
Sbjct: 185 WADRVMAKLE 194
>gi|47566110|ref|ZP_00237148.1| motility protein A [Bacillus cereus G9241]
gi|47557027|gb|EAL15357.1| motility protein A [Bacillus cereus G9241]
Length = 277
Score = 41.7 bits (97), Expect = 0.075, Method: Composition-based stats.
Identities = 12/86 (13%), Positives = 39/86 (45%), Gaps = 8/86 (9%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
++ + ++ + E+ E+ + + L + G++G ++G++ Q++ +
Sbjct: 141 EEELKEVLMKDVETEVYELRKGAALLDKIGDFAPAWGMIGTLIGLIIMLQNL----QDTS 196
Query: 170 VSIPGIIESLISILLGLC----VSIP 191
G+ ++++ L G ++IP
Sbjct: 197 QIGTGMAVAMLTTLYGSVLANMIAIP 222
>gi|239787604|emb|CAX84072.1| MotA/TolQ/ExbB proton channel protein [uncultured bacterium]
Length = 250
Score = 41.7 bits (97), Expect = 0.075, Method: Composition-based stats.
Identities = 15/104 (14%), Positives = 46/104 (44%), Gaps = 11/104 (10%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI 172
+++++ ++ + + + ++ + G+LG ++G++ + +
Sbjct: 121 LEKLLAKELSYQKDRHRNGVGIFEGIAESAPAFGLLGTLIGLVQMLVHM----DDPATIG 176
Query: 173 PGIIESLISILLGLC----VSIP---SSIAYNKFIEDSKKFAMQ 209
PG+ +L+S G+ V+IP +AY+K + ++ +
Sbjct: 177 PGLAMALVSTFYGIFIANMVAIPISYKLMAYSKEEQMVRQVIID 220
>gi|187932852|ref|YP_001887660.1| chemotaxis protein MotA [Clostridium botulinum B str. Eklund 17B]
gi|187721005|gb|ACD22226.1| putative chemotaxis protein MotA [Clostridium botulinum B str.
Eklund 17B]
Length = 258
Score = 41.7 bits (97), Expect = 0.075, Method: Composition-based stats.
Identities = 14/80 (17%), Positives = 34/80 (42%), Gaps = 4/80 (5%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
Q I +++ + + E + + +GI+G V+G++ ++ ++
Sbjct: 123 QSSIKNILETKLEQMSERHQAGIEMFSAAGGYAPTMGIIGTVMGLIQVVSNL----NDPT 178
Query: 170 VSIPGIIESLISILLGLCVS 189
V P I + I+ L G+ +
Sbjct: 179 VLGPKIAAAFIATLYGILSA 198
>gi|319653377|ref|ZP_08007477.1| flagellar motor protein [Bacillus sp. 2_A_57_CT2]
gi|317394861|gb|EFV75599.1| flagellar motor protein [Bacillus sp. 2_A_57_CT2]
Length = 264
Score = 41.7 bits (97), Expect = 0.076, Method: Composition-based stats.
Identities = 17/99 (17%), Positives = 37/99 (37%), Gaps = 7/99 (7%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
D I ++ I E + +G+LGAV+G++ ++ +
Sbjct: 123 DYIRDVLSEEIEAMEERHQAGAQIFSQAGTYAPSLGVLGAVIGLIAALGNM----EDTTS 178
Query: 171 SIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQ 209
I + ++ LLG+ + ++ F K+ + Q
Sbjct: 179 LGHAISAAFVATLLGIFTG---YVFWHPFANKLKRKSKQ 214
>gi|167588460|ref|ZP_02380848.1| MotA/TolQ/ExbB proton channel [Burkholderia ubonensis Bu]
Length = 254
Score = 41.7 bits (97), Expect = 0.076, Method: Composition-based stats.
Identities = 24/155 (15%), Positives = 51/155 (32%), Gaps = 13/155 (8%)
Query: 38 SWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKK 97
+W+ Q R+ ++ S L K + + ++ +S + + +
Sbjct: 52 TWARFFDAVKQLRLAFVQARQVDRQ--SLTDLLEWGDRAKLNGLLAFESMDVSGIHPFAR 109
Query: 98 S---CDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGM 154
S ++D + R +D + GILG+V+G+
Sbjct: 110 RGLELLANGVSTAVLEDALQRELDAYERSHMAAARVWQQ----AGGYAPTFGILGSVMGL 165
Query: 155 MGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVS 189
+ I PGI + ++ L GL ++
Sbjct: 166 IQVTSHIL----EPAQLGPGIAVAFVATLYGLALA 196
>gi|254824035|ref|ZP_05229036.1| flagellar motor protein MotA [Listeria monocytogenes FSL J1-194]
gi|254932035|ref|ZP_05265394.1| flagellar motor protein MotA [Listeria monocytogenes HPB2262]
gi|293583588|gb|EFF95620.1| flagellar motor protein MotA [Listeria monocytogenes HPB2262]
gi|293593264|gb|EFG01025.1| flagellar motor protein MotA [Listeria monocytogenes FSL J1-194]
gi|307570224|emb|CAR83403.1| chemotaxis protein [Listeria monocytogenes L99]
gi|328475648|gb|EGF46397.1| flagellar motor protein MotA [Listeria monocytogenes 220]
gi|332311110|gb|EGJ24205.1| Chemotaxis protein MotA [Listeria monocytogenes str. Scott A]
Length = 283
Score = 41.7 bits (97), Expect = 0.076, Method: Composition-based stats.
Identities = 16/132 (12%), Positives = 40/132 (30%), Gaps = 7/132 (5%)
Query: 73 CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKL 132
++ + L + K + + + +++ +A E
Sbjct: 86 ADEIRRSGVLALEDSVDEIEDPFMKRGMRLVVDGQSSPEFLRDVLEEEVASMEERHAAYA 145
Query: 133 SFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPS 192
S + +G+LGA +G++ + SN I + + + G+
Sbjct: 146 KIFASAGAYAPTLGVLGAAMGLIHAMGEM----SNPDKLSEAIAAAFVCTIFGIFTG--- 198
Query: 193 SIAYNKFIEDSK 204
+ + F K
Sbjct: 199 YVLWTPFANKLK 210
>gi|209885629|ref|YP_002289486.1| chemotaxis protein PomA [Oligotropha carboxidovorans OM5]
gi|209873825|gb|ACI93621.1| chemotaxis protein PomA [Oligotropha carboxidovorans OM5]
Length = 257
Score = 41.7 bits (97), Expect = 0.077, Method: Composition-based stats.
Identities = 13/80 (16%), Positives = 33/80 (41%), Gaps = 4/80 (5%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
D I ++ L + E ++ G++G ++GM+ F ++ ++
Sbjct: 119 MDFIRDNLERDRDNFLMHLEEGSKIYRAVGDCAPAFGMVGTLIGMVQMFANM----TDPS 174
Query: 170 VSIPGIIESLISILLGLCVS 189
P + +L++ L G ++
Sbjct: 175 KLGPYMATALLATLYGAVIA 194
>gi|320354326|ref|YP_004195665.1| MotA/TolQ/ExbB proton channel [Desulfobulbus propionicus DSM 2032]
gi|320122828|gb|ADW18374.1| MotA/TolQ/ExbB proton channel [Desulfobulbus propionicus DSM 2032]
Length = 254
Score = 41.7 bits (97), Expect = 0.077, Method: Composition-based stats.
Identities = 12/77 (15%), Positives = 33/77 (42%), Gaps = 4/77 (5%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI 172
+ M+ I + L +M + +G++G ++G++ Q++ S+
Sbjct: 123 LKAMLLNEIDNIAARHSNGAQILDTMGAIAPAMGMVGTLIGLVQMLQNM----SDPAAIG 178
Query: 173 PGIIESLISILLGLCVS 189
P + +L++ G ++
Sbjct: 179 PAMAVALLTTFYGAVLA 195
>gi|228926762|ref|ZP_04089830.1| Chemotaxis protein, MotA [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228832875|gb|EEM78444.1| Chemotaxis protein, MotA [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
Length = 277
Score = 41.7 bits (97), Expect = 0.078, Method: Composition-based stats.
Identities = 12/86 (13%), Positives = 39/86 (45%), Gaps = 8/86 (9%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
++ + ++ + E+ E+ + + L + G++G ++G++ Q++ +
Sbjct: 141 EEELKEVLMKDVETEVYELRKGAALLDKIGDFAPAWGMIGTLIGLIIMLQNL----QDTS 196
Query: 170 VSIPGIIESLISILLGLC----VSIP 191
G+ ++++ L G ++IP
Sbjct: 197 QIGTGMAVAMLTTLYGSVLANMIAIP 222
>gi|28211322|ref|NP_782266.1| chemotaxis motA protein [Clostridium tetani E88]
gi|28203762|gb|AAO36203.1| chemotaxis motA protein [Clostridium tetani E88]
Length = 276
Score = 41.7 bits (97), Expect = 0.078, Method: Composition-based stats.
Identities = 14/79 (17%), Positives = 33/79 (41%), Gaps = 4/79 (5%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ I +MD+ I E + L + + G+ G ++G++ ++
Sbjct: 131 ETIQDIMDLEIGEMERRHGEGVDMLKAWGAYAPAFGMAGTLIGLIQMLGNLNESGQI--- 187
Query: 171 SIPGIIESLISILLGLCVS 189
G+ ++LI+ L G ++
Sbjct: 188 -ASGMSKALITTLYGSLMA 205
>gi|328467254|gb|EGF38334.1| flagellar motor protein MotA [Listeria monocytogenes 1816]
Length = 283
Score = 41.7 bits (97), Expect = 0.079, Method: Composition-based stats.
Identities = 16/132 (12%), Positives = 40/132 (30%), Gaps = 7/132 (5%)
Query: 73 CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKL 132
++ + L + K + + + +++ +A E
Sbjct: 86 ADEIRRSGVLALEDSVDEIEDPFMKRGMRLVVDGQSSPEFLRDVLEEEVASMEERHAAYA 145
Query: 133 SFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPS 192
S + +G+LGA +G++ + SN I + + + G+
Sbjct: 146 KIFASAGAYAPTLGVLGAAMGLIHAMGEM----SNPDKLSEAIAAAFVCTIFGIFTG--- 198
Query: 193 SIAYNKFIEDSK 204
+ + F K
Sbjct: 199 YVLWTPFANKLK 210
>gi|16799768|ref|NP_470036.1| flagellar motor protein MotA [Listeria innocua Clip11262]
gi|16413145|emb|CAC95925.1| lin0693 [Listeria innocua Clip11262]
gi|313620084|gb|EFR91592.1| chemotaxis protein MotA [Listeria innocua FSL S4-378]
gi|313624927|gb|EFR94835.1| chemotaxis protein MotA [Listeria innocua FSL J1-023]
Length = 283
Score = 41.7 bits (97), Expect = 0.079, Method: Composition-based stats.
Identities = 16/132 (12%), Positives = 40/132 (30%), Gaps = 7/132 (5%)
Query: 73 CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKL 132
++ + L + K + + + +++ +A E
Sbjct: 86 ADEIRRSGVLALEDSVDEIEDPFMKRGMRLVVDGQSSPEFLRDVLEEEVASMEERHAAYA 145
Query: 133 SFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPS 192
S + +G+LGA +G++ + SN I + + + G+
Sbjct: 146 KIFASAGAYAPTLGVLGAAMGLIHAMGEM----SNPDKLSEAIAAAFVCTIFGIFTG--- 198
Query: 193 SIAYNKFIEDSK 204
+ + F K
Sbjct: 199 YVLWTPFANKLK 210
>gi|229058359|ref|ZP_04196743.1| Chemotaxis protein, MotA [Bacillus cereus AH603]
gi|228719868|gb|EEL71458.1| Chemotaxis protein, MotA [Bacillus cereus AH603]
Length = 277
Score = 41.7 bits (97), Expect = 0.080, Method: Composition-based stats.
Identities = 10/77 (12%), Positives = 35/77 (45%), Gaps = 4/77 (5%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI 172
+ ++ + E+ E+ + + L + G++G ++G++ Q++ +
Sbjct: 144 LKEVLMRDVETEVYELRKGATLLDKIGDFAPAWGMIGTLIGLIIMLQNL----QDTSQIG 199
Query: 173 PGIIESLISILLGLCVS 189
G+ ++++ L G ++
Sbjct: 200 TGMAVAMLTTLYGSVIA 216
>gi|303240001|ref|ZP_07326523.1| MotA/TolQ/ExbB proton channel [Acetivibrio cellulolyticus CD2]
gi|302592480|gb|EFL62206.1| MotA/TolQ/ExbB proton channel [Acetivibrio cellulolyticus CD2]
Length = 268
Score = 41.7 bits (97), Expect = 0.081, Method: Composition-based stats.
Identities = 17/119 (14%), Positives = 45/119 (37%), Gaps = 5/119 (4%)
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
+ + + + L A + E+ K + + + I MD+ I +
Sbjct: 82 ELSQKARRDGLLSLEAEQENIKDEFLKESLQLVVDGVE-PEIIVESMDLEIENMKARHDK 140
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVS 189
+M++ G++G ++G++ +S+ + P + +LI+ G ++
Sbjct: 141 GTGLFKTMAAQFPAWGMIGTLIGLIQLLKSL----DDPSKIGPAMAVALITTFYGSVLA 195
>gi|32471118|ref|NP_864111.1| biopolymer transport protein [Rhodopirellula baltica SH 1]
gi|32396820|emb|CAD71788.1| probable biopolymer transport protein [Rhodopirellula baltica SH 1]
Length = 499
Score = 41.7 bits (97), Expect = 0.082, Method: Composition-based stats.
Identities = 22/151 (14%), Positives = 54/151 (35%), Gaps = 13/151 (8%)
Query: 74 KSLKNHHNIGLAAIFMSAMSE--WKKSCDKGARS-PIGIQDRIDRMMDVAIARELEEITE 130
KSL++ + ++ + ++E ++S G P +++ +R D A
Sbjct: 167 KSLRSLPSSTRNSLLVRRLNEVLGRQSHRTGTGDLPQDLREMSERDADAAHDSF------ 220
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV--SIPGIIESLISILLGLCV 188
+ + A ++G LG V+G+ + V G+ + + LGL +
Sbjct: 221 --GLIRIIVWAIPMLGFLGTVIGITQTLGGLDFTDGTAAVDRLKSGLYVAFDTTALGLVL 278
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
S+ + + ++ + +
Sbjct: 279 SVLAIFLQFPVERSQQSLLASVDQRVRDLVS 309
>gi|146292068|ref|YP_001182492.1| MotA/TolQ/ExbB proton channel [Shewanella putrefaciens CN-32]
gi|145563758|gb|ABP74693.1| MotA/TolQ/ExbB proton channel [Shewanella putrefaciens CN-32]
Length = 244
Score = 41.7 bits (97), Expect = 0.082, Method: Composition-based stats.
Identities = 30/203 (14%), Positives = 77/203 (37%), Gaps = 23/203 (11%)
Query: 6 LAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS 65
+ + D S Q+G+ L + + L+ + +++S F+ ++ W
Sbjct: 1 MPMTDFSTLQ--TQLGVLT----WPLLLCAFLALMICLERSALFLHQTLLSILPQKQAW- 53
Query: 66 GQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRI-------DRMMD 118
K+L+ + + + + D AR + ++ + ++
Sbjct: 54 -------IKNLRRSTSTATTENINTLLEQTSVQNDLLARGATLLLKQVHQPKTLREELLS 106
Query: 119 VAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYS--NNVVSIPGII 176
+ + ++ ++ L L + L+G+LG VLG++ F + G+
Sbjct: 107 LWLNKQQRDLQAGLKVLQVIGIISPLLGLLGTVLGLIDMFAELGQSQGPVTPAQLSAGLG 166
Query: 177 ESLISILLGLCVSIPSSIAYNKF 199
++ + GL +++P+ A + F
Sbjct: 167 LAMNTTAAGLIIAVPAITAAHLF 189
>gi|229029407|ref|ZP_04185490.1| Chemotaxis protein, MotA [Bacillus cereus AH1271]
gi|228731866|gb|EEL82765.1| Chemotaxis protein, MotA [Bacillus cereus AH1271]
Length = 277
Score = 41.7 bits (97), Expect = 0.083, Method: Composition-based stats.
Identities = 12/86 (13%), Positives = 39/86 (45%), Gaps = 8/86 (9%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
++ + ++ + E+ E+ + + L + G++G ++G++ Q++ +
Sbjct: 141 EEELKEVLMKDVETEVYELRKGATLLDKIGDFAPAWGMIGTLIGLIIMLQNL----QDTS 196
Query: 170 VSIPGIIESLISILLGLC----VSIP 191
G+ ++++ L G ++IP
Sbjct: 197 QIGTGMAVAMLTTLYGSVLANMIAIP 222
>gi|154250210|ref|YP_001411035.1| MotA/TolQ/ExbB proton channel [Fervidobacterium nodosum Rt17-B1]
gi|154154146|gb|ABS61378.1| MotA/TolQ/ExbB proton channel [Fervidobacterium nodosum Rt17-B1]
Length = 262
Score = 41.7 bits (97), Expect = 0.083, Method: Composition-based stats.
Identities = 25/103 (24%), Positives = 50/103 (48%), Gaps = 7/103 (6%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ + MM++ I E+ ++ +F S+ + G G++G ++G++ +S+ +N
Sbjct: 122 EVLRNMMEIEIDMATAEMMDQKAFFDSLGTFGPAFGMIGTLVGLIQMLKSL----NNPET 177
Query: 171 SIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGF 213
P + +LI+ L G SI ++I E K A +E F
Sbjct: 178 LGPSMAVALITTLYG---SILANIVGIPVAEKIAKRAADLEVF 217
>gi|206974871|ref|ZP_03235786.1| putative chemotaxis protein MotA [Bacillus cereus H3081.97]
gi|206746890|gb|EDZ58282.1| putative chemotaxis protein MotA [Bacillus cereus H3081.97]
Length = 277
Score = 41.7 bits (97), Expect = 0.084, Method: Composition-based stats.
Identities = 13/86 (15%), Positives = 38/86 (44%), Gaps = 8/86 (9%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
+D + ++ + E+ E+ + L + G++G ++G++ Q++ +
Sbjct: 141 EDELKEVLMKDVETEVYELRKGAVLLDKIGDFAPAWGMIGTLIGLIIMLQNL----QDTS 196
Query: 170 VSIPGIIESLISILLGLC----VSIP 191
G+ ++++ L G ++IP
Sbjct: 197 QIGTGMAVAMLTTLYGSVLANMIAIP 222
>gi|301060364|ref|ZP_07201227.1| conserved hypothetical protein [delta proteobacterium NaphS2]
gi|300445560|gb|EFK09462.1| conserved hypothetical protein [delta proteobacterium NaphS2]
Length = 212
Score = 41.7 bits (97), Expect = 0.085, Method: Composition-based stats.
Identities = 23/175 (13%), Positives = 62/175 (35%), Gaps = 23/175 (13%)
Query: 27 IITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAA 86
++ LL + W ++ ++R+ F S + L +K +
Sbjct: 22 VVILLIFLCL--WIILYAGGFVGEAVKRR------HFRSDRHLAEFLDDMKQAKQLPPEV 73
Query: 87 I------FMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSS 140
++ +E + + + +++ + A+ARE+++I +
Sbjct: 74 AENLPLGIVAYANELRDIIHDKSPFRDEKVEDLNQRKEHALAREVDKIR-------LIVR 126
Query: 141 AGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIA 195
G +G++G ++ M + N +I + + ++GL + I +
Sbjct: 127 IGPSLGLMGTLIPMGTGLAGL--TQGNMAQLSSSLILAFTTTVVGLALGITAHFF 179
>gi|300114850|ref|YP_003761425.1| MotA/TolQ/ExbB proton channel [Nitrosococcus watsonii C-113]
gi|299540787|gb|ADJ29104.1| MotA/TolQ/ExbB proton channel [Nitrosococcus watsonii C-113]
Length = 256
Score = 41.7 bits (97), Expect = 0.085, Method: Composition-based stats.
Identities = 10/79 (12%), Positives = 33/79 (41%), Gaps = 4/79 (5%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ + R++ + + L ++ +G++G ++G++ S+ +
Sbjct: 119 EMVRRVLMTDLRQTLSRHELGQKIFKAIGDVAPAMGMIGTLIGLVQMLSSM----DDPKK 174
Query: 171 SIPGIIESLISILLGLCVS 189
P + +L++ L G ++
Sbjct: 175 IGPAMAVALLTTLYGAMIA 193
>gi|242281266|ref|YP_002993395.1| MotA/TolQ/ExbB proton channel [Desulfovibrio salexigens DSM 2638]
gi|242124160|gb|ACS81856.1| MotA/TolQ/ExbB proton channel [Desulfovibrio salexigens DSM 2638]
Length = 253
Score = 41.7 bits (97), Expect = 0.085, Method: Composition-based stats.
Identities = 15/93 (16%), Positives = 37/93 (39%), Gaps = 7/93 (7%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI 172
I +++ I L + +G++G V+G++ Q++ S+
Sbjct: 123 IQEILETEIQYLENRHETGAEILKVFADFAPAMGMIGTVIGLVQMLQTM----SDPSTIG 178
Query: 173 PGIIESLISILLGLCVSIPSSIAYNKFIEDSKK 205
P + +L++ L G +I +++ + K
Sbjct: 179 PAMAVALLTTLYG---AILANLVFTPMSGKLKT 208
>gi|254973921|ref|ZP_05270393.1| chemotaxis protein [Clostridium difficile QCD-66c26]
gi|255091308|ref|ZP_05320786.1| chemotaxis protein [Clostridium difficile CIP 107932]
gi|255312965|ref|ZP_05354548.1| chemotaxis protein [Clostridium difficile QCD-76w55]
gi|255515724|ref|ZP_05383400.1| chemotaxis protein [Clostridium difficile QCD-97b34]
gi|255648818|ref|ZP_05395720.1| chemotaxis protein [Clostridium difficile QCD-37x79]
gi|260682037|ref|YP_003213322.1| chemotaxis protein [Clostridium difficile CD196]
gi|260685635|ref|YP_003216768.1| chemotaxis protein [Clostridium difficile R20291]
gi|306518933|ref|ZP_07405280.1| chemotaxis protein [Clostridium difficile QCD-32g58]
gi|260208200|emb|CBA60546.1| chemotaxis protein [Clostridium difficile CD196]
gi|260211651|emb|CBE01910.1| chemotaxis protein [Clostridium difficile R20291]
Length = 272
Score = 41.7 bits (97), Expect = 0.085, Method: Composition-based stats.
Identities = 19/132 (14%), Positives = 52/132 (39%), Gaps = 7/132 (5%)
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+T+ K + + + + M + K + + + + I ++++ I E
Sbjct: 85 FKTLSKKARREGLLSIESDVMKIQDPFMKKGLELCIDGLEVNE-IRSILELEIDSVEETN 143
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCV 188
+ + G+LG ++G++ + ++ + G+ ++LI+ G +
Sbjct: 144 NRYSKLFKTWGTFAPAFGMLGTLIGLIQMLSDL----TSPDLIASGMGKALITTFYGSLL 199
Query: 189 SIPSS--IAYNK 198
+ + IAYN
Sbjct: 200 ANIALNPIAYNI 211
>gi|323703349|ref|ZP_08114999.1| MotA/TolQ/ExbB proton channel [Desulfotomaculum nigrificans DSM
574]
gi|323531712|gb|EGB21601.1| MotA/TolQ/ExbB proton channel [Desulfotomaculum nigrificans DSM
574]
Length = 259
Score = 41.7 bits (97), Expect = 0.086, Method: Composition-based stats.
Identities = 13/79 (16%), Positives = 33/79 (41%), Gaps = 4/79 (5%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ + +++ I E ++ + +GI+G V+G++ ++ S+
Sbjct: 122 EMVRSILETEIYSAYERHQVGVNIFEAAGGYAPTMGIIGTVMGLVHVLANL----SDPDS 177
Query: 171 SIPGIIESLISILLGLCVS 189
P I + I+ L G+ +
Sbjct: 178 LGPAIAMAFIATLYGVSSA 196
>gi|327542814|gb|EGF29275.1| biopolymer transport protein [Rhodopirellula baltica WH47]
Length = 499
Score = 41.7 bits (97), Expect = 0.087, Method: Composition-based stats.
Identities = 22/151 (14%), Positives = 54/151 (35%), Gaps = 13/151 (8%)
Query: 74 KSLKNHHNIGLAAIFMSAMSE--WKKSCDKGARS-PIGIQDRIDRMMDVAIARELEEITE 130
KSL++ + ++ + ++E ++S G P +++ +R D A
Sbjct: 167 KSLRSLPSSTRNSLLVRRLNEVLGRQSHRTGTGDLPQDLREMSERDADAAHDSF------ 220
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV--SIPGIIESLISILLGLCV 188
+ + A ++G LG V+G+ + V G+ + + LGL +
Sbjct: 221 --GLIRIIVWAIPMLGFLGTVIGITQTLGGLDFTDGTAAVDRLKSGLYVAFDTTALGLVL 278
Query: 189 SIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
S+ + + ++ + +
Sbjct: 279 SVLAIFLQFPVERSQQSLLASVDQRVRDLVS 309
>gi|168186128|ref|ZP_02620763.1| chemotaxis protein PomA [Clostridium botulinum C str. Eklund]
gi|169295763|gb|EDS77896.1| chemotaxis protein PomA [Clostridium botulinum C str. Eklund]
Length = 268
Score = 41.7 bits (97), Expect = 0.087, Method: Composition-based stats.
Identities = 12/79 (15%), Positives = 35/79 (44%), Gaps = 4/79 (5%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ I ++++ I + + L + + G+LG ++G++ ++ +
Sbjct: 125 ETIREILELEIGEMEKRHKDGSDVLKAWAGYAPAFGMLGTLIGLIQMLANL----DDPSN 180
Query: 171 SIPGIIESLISILLGLCVS 189
PG+ ++LI+ G ++
Sbjct: 181 LGPGMSKALITTFYGSLIA 199
>gi|255305282|ref|ZP_05349454.1| chemotaxis protein [Clostridium difficile ATCC 43255]
Length = 272
Score = 41.7 bits (97), Expect = 0.088, Method: Composition-based stats.
Identities = 19/132 (14%), Positives = 52/132 (39%), Gaps = 7/132 (5%)
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+T+ K + + + + M + K + + I + I ++++ I +
Sbjct: 85 FKTLSKKARKEGLLSIESDVMEIEDPFMKKGLELCIDGLEINE-IRSILELEIDSVEDTN 143
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCV 188
+ + G+LG ++G++ + ++ + G+ ++LI+ G +
Sbjct: 144 NRYSKLFKTWGTFAPAFGMLGTLIGLIQMLADL----TSPDLIASGMGKALITTFYGSLL 199
Query: 189 SIPSS--IAYNK 198
+ + IAYN
Sbjct: 200 ANIALNPIAYNI 211
>gi|188588133|ref|YP_001922643.1| chemotaxis protein MotA [Clostridium botulinum E3 str. Alaska E43]
gi|251780033|ref|ZP_04822953.1| putative chemotaxis protein MotA [Clostridium botulinum E1 str.
'BoNT E Beluga']
gi|188498414|gb|ACD51550.1| putative chemotaxis protein MotA [Clostridium botulinum E3 str.
Alaska E43]
gi|243084348|gb|EES50238.1| putative chemotaxis protein MotA [Clostridium botulinum E1 str.
'BoNT E Beluga']
Length = 258
Score = 41.7 bits (97), Expect = 0.088, Method: Composition-based stats.
Identities = 14/80 (17%), Positives = 34/80 (42%), Gaps = 4/80 (5%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
Q I +++ + + E + + +GI+G V+G++ ++ ++
Sbjct: 123 QSSIKSILETKLEQMSERHQVGIEMFSAAGGYAPTMGIIGTVMGLIQVVSNL----NDPT 178
Query: 170 VSIPGIIESLISILLGLCVS 189
V P I + I+ L G+ +
Sbjct: 179 VLGPKIAAAFIATLYGILSA 198
>gi|83593141|ref|YP_426893.1| MotA/TolQ/ExbB proton channel [Rhodospirillum rubrum ATCC 11170]
gi|83576055|gb|ABC22606.1| MotA/TolQ/ExbB proton channel [Rhodospirillum rubrum ATCC 11170]
Length = 266
Score = 41.7 bits (97), Expect = 0.088, Method: Composition-based stats.
Identities = 14/56 (25%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Query: 134 FLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVS 189
L +M G++G ++G++ F S+ SN G+ +L + L GL +
Sbjct: 150 ILRNMGGTAPAFGMIGTLVGLIIMFDSM---GSNPGSMGAGLAVALTATLYGLLSA 202
>gi|322383006|ref|ZP_08056836.1| MotP-like protein [Paenibacillus larvae subsp. larvae B-3650]
gi|321153029|gb|EFX45489.1| MotP-like protein [Paenibacillus larvae subsp. larvae B-3650]
Length = 230
Score = 41.7 bits (97), Expect = 0.088, Method: Composition-based stats.
Identities = 23/157 (14%), Positives = 55/157 (35%), Gaps = 7/157 (4%)
Query: 67 QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDR--IDRMMDVAIARE 124
++++ + G+ A+ A + G + D +++++ +
Sbjct: 41 ETIDDIVDMATIARREGVLALEQRAQEHPNEFLRDGLMMVVDGTDPELTRQILELEMDSI 100
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILL 184
++ S +GI+G V+G++ ++ + P I + + L
Sbjct: 101 EQQNEGMTKMFESAGGYSPTMGIIGTVMGLIHVLGNL----EDPSALGPAIAVAFTATLY 156
Query: 185 GLCVS-IPSSIAYNKFIEDSKKFAMQMEGFANEFSAI 220
G+ + + NK SK+ QME A+
Sbjct: 157 GVMAANVIYLPIGNKIRIRSKEQISQMELMLEGILAL 193
>gi|196248996|ref|ZP_03147696.1| MotA/TolQ/ExbB proton channel [Geobacillus sp. G11MC16]
gi|196211872|gb|EDY06631.1| MotA/TolQ/ExbB proton channel [Geobacillus sp. G11MC16]
Length = 263
Score = 41.7 bits (97), Expect = 0.089, Method: Composition-based stats.
Identities = 18/96 (18%), Positives = 38/96 (39%), Gaps = 7/96 (7%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
Q+ I +M IA E + + +G+LGAV+G++ ++ N
Sbjct: 122 QEFIRDVMTEEIAAMEERHEANAAIFTHAGTYAPTLGVLGAVIGLIAALGNM----ENIA 177
Query: 170 VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKK 205
I + ++ LLG+ + ++ F ++
Sbjct: 178 ELGQAISAAFVATLLGIFSG---YVLWHPFANKLRR 210
>gi|27378911|ref|NP_770440.1| chemotaxis protein [Bradyrhizobium japonicum USDA 110]
gi|27352061|dbj|BAC49065.1| pomA [Bradyrhizobium japonicum USDA 110]
Length = 257
Score = 41.7 bits (97), Expect = 0.090, Method: Composition-based stats.
Identities = 32/195 (16%), Positives = 65/195 (33%), Gaps = 10/195 (5%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCI----ITLLFIFSILSWSVIIQKSVNFITLRRQF 56
M GL I I A+ G I + ++F SI + + S L
Sbjct: 4 MTGVGLTAGIIVIAAMIFMGGDLHMFISEHAMIIIFGGSISATMIRFPLSALLHGLPLGA 63
Query: 57 R-EFEQLFWSGQSL-ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRID 114
+ F S L + + + + G + E + + D I
Sbjct: 64 KFAFTMSRLSAHDLVDELARIAEIARKQGPVGLEKVETDEPFLAKGIRYVADGYDLDFIR 123
Query: 115 RMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG 174
++ L + E ++ G++G ++GM+ F ++ ++ P
Sbjct: 124 DNLERDRDNFLMHLDEGSKIYRAIGDCAPAFGMIGTLIGMVQMFANM----TDPSKLGPF 179
Query: 175 IIESLISILLGLCVS 189
+ +L++ L G V+
Sbjct: 180 MATALLATLYGALVA 194
>gi|283782102|ref|YP_003372857.1| MotA/TolQ/ExbB proton channel [Pirellula staleyi DSM 6068]
gi|283440555|gb|ADB18997.1| MotA/TolQ/ExbB proton channel [Pirellula staleyi DSM 6068]
Length = 259
Score = 41.3 bits (96), Expect = 0.091, Method: Composition-based stats.
Identities = 15/79 (18%), Positives = 33/79 (41%), Gaps = 4/79 (5%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ I+ +M + E L + +G++G +LG++ ++ S+
Sbjct: 122 EAIEEVMRTEVESLSLRHKEGKGMLDQIGRFAPAMGMIGTLLGLIIMLGNM----SDPSA 177
Query: 171 SIPGIIESLISILLGLCVS 189
G+ +LI+ L G +S
Sbjct: 178 IGGGMAVALITTLYGAVIS 196
>gi|313894835|ref|ZP_07828395.1| conserved hypothetical protein [Selenomonas sp. oral taxon 137 str.
F0430]
gi|312976516|gb|EFR41971.1| conserved hypothetical protein [Selenomonas sp. oral taxon 137 str.
F0430]
Length = 64
Score = 41.3 bits (96), Expect = 0.091, Method: Composition-based stats.
Identities = 14/51 (27%), Positives = 22/51 (43%)
Query: 169 VVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
+ GI E+LI+ GL V+I S + + F + +E N A
Sbjct: 1 MAITGGIGEALIATATGLLVAIFSLVVHTYFAQRMDVMLTLLEKTMNTLQA 51
>gi|313681735|ref|YP_004059473.1| mota/tolq/exbb proton channel [Sulfuricurvum kujiense DSM 16994]
gi|313154595|gb|ADR33273.1| MotA/TolQ/ExbB proton channel [Sulfuricurvum kujiense DSM 16994]
Length = 256
Score = 41.3 bits (96), Expect = 0.093, Method: Composition-based stats.
Identities = 21/119 (17%), Positives = 41/119 (34%), Gaps = 5/119 (4%)
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
+ + + L A SE+ K A + D I M++ I
Sbjct: 83 ELSTMARRDGLLSLEAKVAQLDSEFLKQGLSMAVDGNEV-DTIVETMELVIEETEHYYHG 141
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVS 189
+ ++G++GAVLG++ Q + N GI + + + G+ +
Sbjct: 142 CAHYWIIAGETSPVLGLVGAVLGLILALQKL----DNPAEMAAGIAGAFTATVTGIFSA 196
>gi|217959211|ref|YP_002337759.1| flagellar motor protein MotP [Bacillus cereus AH187]
gi|222095351|ref|YP_002529411.1| flagellar motor protein motp [Bacillus cereus Q1]
gi|229195940|ref|ZP_04322693.1| Chemotaxis protein, MotA [Bacillus cereus m1293]
gi|217066753|gb|ACJ81003.1| putative chemotaxis protein MotA [Bacillus cereus AH187]
gi|221239409|gb|ACM12119.1| chemotaxis protein [Bacillus cereus Q1]
gi|228587499|gb|EEK45564.1| Chemotaxis protein, MotA [Bacillus cereus m1293]
Length = 277
Score = 41.3 bits (96), Expect = 0.094, Method: Composition-based stats.
Identities = 13/86 (15%), Positives = 38/86 (44%), Gaps = 8/86 (9%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
+D + ++ + E+ E+ + L + G++G ++G++ Q++ +
Sbjct: 141 EDELKEVLMKDVETEVYELRKGAVLLDKIGDFAPAWGMIGTLIGLIIMLQNL----QDTS 196
Query: 170 VSIPGIIESLISILLGLC----VSIP 191
G+ ++++ L G ++IP
Sbjct: 197 QIGTGMAVAMLTTLYGSVLANMIAIP 222
>gi|229155298|ref|ZP_04283409.1| Chemotaxis protein, MotA [Bacillus cereus ATCC 4342]
gi|228628223|gb|EEK84939.1| Chemotaxis protein, MotA [Bacillus cereus ATCC 4342]
Length = 245
Score = 41.3 bits (96), Expect = 0.094, Method: Composition-based stats.
Identities = 12/86 (13%), Positives = 39/86 (45%), Gaps = 8/86 (9%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
++ + ++ + E+ E+ + + L + G++G ++G++ Q++ +
Sbjct: 109 EEELKEVLMKDVETEVYELRKGAALLDKIGDFAPAWGMIGTLIGLIIMLQNL----QDTS 164
Query: 170 VSIPGIIESLISILLGLC----VSIP 191
G+ ++++ L G ++IP
Sbjct: 165 QIGTGMAVAMLTTLYGSVLANMIAIP 190
>gi|49477309|ref|YP_035847.1| flagellar motor protein MotP [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|218902842|ref|YP_002450676.1| putative chemotaxis protein MotA [Bacillus cereus AH820]
gi|228933011|ref|ZP_04095874.1| Chemotaxis protein, MotA [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|229121279|ref|ZP_04250510.1| Chemotaxis protein, MotA [Bacillus cereus 95/8201]
gi|49328865|gb|AAT59511.1| chemotaxis protein MotA [Bacillus thuringiensis serovar konkukian
str. 97-27]
gi|218537884|gb|ACK90282.1| putative chemotaxis protein MotA [Bacillus cereus AH820]
gi|228662124|gb|EEL17733.1| Chemotaxis protein, MotA [Bacillus cereus 95/8201]
gi|228826612|gb|EEM72383.1| Chemotaxis protein, MotA [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
Length = 277
Score = 41.3 bits (96), Expect = 0.094, Method: Composition-based stats.
Identities = 13/86 (15%), Positives = 38/86 (44%), Gaps = 8/86 (9%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
+D + ++ + E+ E+ + L + G++G ++G++ Q++ +
Sbjct: 141 EDELKEVLMKDVETEVYELRKGAVLLDKIGDFAPAWGMIGTLIGLIIMLQNL----QDTS 196
Query: 170 VSIPGIIESLISILLGLC----VSIP 191
G+ ++++ L G ++IP
Sbjct: 197 QIGTGMAVAMLTTLYGSVLANMIAIP 222
>gi|78221682|ref|YP_383429.1| MotA/TolQ/ExbB proton channel [Geobacter metallireducens GS-15]
gi|78192937|gb|ABB30704.1| MotA/TolQ/ExbB proton channel [Geobacter metallireducens GS-15]
Length = 254
Score = 41.3 bits (96), Expect = 0.094, Method: Composition-based stats.
Identities = 22/123 (17%), Positives = 49/123 (39%), Gaps = 6/123 (4%)
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQD--RIDRMMDVAIARELE 126
++ + GL ++ A + KG + D ++ +++ IA E
Sbjct: 78 IKEIIGYAAKARRNGLISLEQEAQNVKDAFTKKGISLVVDGIDPQKLRETLEIEIAYYEE 137
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGL 186
+ F + +GI+GAVLG++ ++ S++ GI + ++ + GL
Sbjct: 138 HSKQSAEFFEAAGGYAPTIGIIGAVLGLIHVMANL----SDSSKLGAGIAVAFVATIYGL 193
Query: 187 CVS 189
+
Sbjct: 194 MTA 196
>gi|42780819|ref|NP_978066.1| flagellar motor protein MotP [Bacillus cereus ATCC 10987]
gi|42736739|gb|AAS40674.1| chemotaxis protein MotA, putative [Bacillus cereus ATCC 10987]
Length = 277
Score = 41.3 bits (96), Expect = 0.097, Method: Composition-based stats.
Identities = 13/86 (15%), Positives = 38/86 (44%), Gaps = 8/86 (9%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
+D + ++ + E+ E+ + L + G++G ++G++ Q++ +
Sbjct: 141 EDELKEVLMKDVETEVYELRKGAVLLDKIGDFAPAWGMIGTLIGLIIMLQNL----QDTS 196
Query: 170 VSIPGIIESLISILLGLC----VSIP 191
G+ ++++ L G ++IP
Sbjct: 197 QIGTGMAVAMLTTLYGSVLANMIAIP 222
>gi|324325746|gb|ADY21006.1| flagellar motor protein MotP [Bacillus thuringiensis serovar
finitimus YBT-020]
Length = 277
Score = 41.3 bits (96), Expect = 0.098, Method: Composition-based stats.
Identities = 12/86 (13%), Positives = 38/86 (44%), Gaps = 8/86 (9%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
++ + ++ + E+ E+ + L + G++G ++G++ Q++ +
Sbjct: 141 EEELKEVLMKDVETEVYELRKGAVLLDKIGDFAPAWGMIGTLIGLIIMLQNL----QDTS 196
Query: 170 VSIPGIIESLISILLGLC----VSIP 191
G+ ++++ L G ++IP
Sbjct: 197 QIGTGMAVAMLTTLYGSVLANMIAIP 222
>gi|229138427|ref|ZP_04267016.1| Chemotaxis protein, MotA [Bacillus cereus BDRD-ST26]
gi|228644964|gb|EEL01207.1| Chemotaxis protein, MotA [Bacillus cereus BDRD-ST26]
Length = 240
Score = 41.3 bits (96), Expect = 0.098, Method: Composition-based stats.
Identities = 13/86 (15%), Positives = 38/86 (44%), Gaps = 8/86 (9%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
+D + ++ + E+ E+ + L + G++G ++G++ Q++ +
Sbjct: 109 EDELKEVLMKDVETEVYELRKGAVLLDKIGDFAPAWGMIGTLIGLIIMLQNL----QDTS 164
Query: 170 VSIPGIIESLISILLGLC----VSIP 191
G+ ++++ L G ++IP
Sbjct: 165 QIGTGMAVAMLTTLYGSVLANMIAIP 190
>gi|322421652|ref|YP_004200875.1| MotA/TolQ/ExbB proton channel [Geobacter sp. M18]
gi|320128039|gb|ADW15599.1| MotA/TolQ/ExbB proton channel [Geobacter sp. M18]
Length = 254
Score = 41.3 bits (96), Expect = 0.099, Method: Composition-based stats.
Identities = 20/109 (18%), Positives = 40/109 (36%), Gaps = 5/109 (4%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI 172
+ M++ ++ + +GI+GAVLG++ ++ S+
Sbjct: 124 LRETMEIELSSFESHAKHSAEVFEAAGGFAPTIGIIGAVLGLIHVMSNL----SDPSKLG 179
Query: 173 PGIIESLISILLGLCVS-IPSSIAYNKFIEDSKKFAMQMEGFANEFSAI 220
GI + ++ + GL + I K K+ +Q E AI
Sbjct: 180 GGIAVAFVATIYGLMTANIFCIPFGTKLKCRLKEELLQKEMVIEGLIAI 228
>gi|299133622|ref|ZP_07026816.1| MotA/TolQ/ExbB proton channel [Afipia sp. 1NLS2]
gi|298591458|gb|EFI51659.1| MotA/TolQ/ExbB proton channel [Afipia sp. 1NLS2]
Length = 257
Score = 41.3 bits (96), Expect = 0.10, Method: Composition-based stats.
Identities = 14/80 (17%), Positives = 33/80 (41%), Gaps = 4/80 (5%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
D I ++ L + E ++ G++G ++GM+ F ++ ++
Sbjct: 119 MDFIRDNLERDRDNFLMHLDEGSKIYRAVGDCAPAFGMVGTLIGMVQMFANM----TDPS 174
Query: 170 VSIPGIIESLISILLGLCVS 189
P + +L++ L G V+
Sbjct: 175 KLGPYMATALLATLYGAVVA 194
>gi|256830502|ref|YP_003159230.1| MotA/TolQ/ExbB proton channel [Desulfomicrobium baculatum DSM 4028]
gi|256579678|gb|ACU90814.1| MotA/TolQ/ExbB proton channel [Desulfomicrobium baculatum DSM 4028]
Length = 251
Score = 41.3 bits (96), Expect = 0.10, Method: Composition-based stats.
Identities = 12/77 (15%), Positives = 34/77 (44%), Gaps = 4/77 (5%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI 172
I +M+ I+ E + L + + +G++G V+G++ + + ++
Sbjct: 121 IQEIMETEISCLEERHLKGAEILQTFGNLAPAMGMIGTVIGLVLMLKRM----NDPSTIG 176
Query: 173 PGIIESLISILLGLCVS 189
P + +L++ G ++
Sbjct: 177 PAMAVALLTTFYGAVMA 193
>gi|226950065|ref|YP_002805156.1| chemotaxis MotA protein [Clostridium botulinum A2 str. Kyoto]
gi|226842087|gb|ACO84753.1| chemotaxis MotA protein [Clostridium botulinum A2 str. Kyoto]
Length = 270
Score = 41.3 bits (96), Expect = 0.10, Method: Composition-based stats.
Identities = 11/79 (13%), Positives = 32/79 (40%), Gaps = 4/79 (5%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ I +M++ I + L + G++G ++G++ ++ +
Sbjct: 125 ETIRDIMELEIDEMEKRHKSGADMLKTWGGYSPAFGMIGTLIGLIQMLANLTDSSTI--- 181
Query: 171 SIPGIIESLISILLGLCVS 189
G+ ++LI+ G ++
Sbjct: 182 -ASGMGKALITTFYGSVMA 199
>gi|149907621|ref|ZP_01896368.1| TonB system transport protein [Moritella sp. PE36]
gi|149809291|gb|EDM69220.1| TonB system transport protein [Moritella sp. PE36]
Length = 168
Score = 41.3 bits (96), Expect = 0.10, Method: Composition-based stats.
Identities = 24/118 (20%), Positives = 52/118 (44%), Gaps = 7/118 (5%)
Query: 93 SEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVL 152
+EW + D+ I ++D I+ ++T KL F+ +++ L+G+LG V
Sbjct: 49 AEWAQWQDQSHLLAIAVRDGF-------ISELQSQLTRKLIFIKTLTGVLPLLGLLGTVD 101
Query: 153 GMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQM 210
GM+ F ++ + + GI ++L++ L GL + + + + +
Sbjct: 102 GMIDNFSVLSDSLGVSELFSSGIAQALLTTLAGLVTGSSGLFFCHSLNKRANLLTLDL 159
>gi|218778867|ref|YP_002430185.1| MotA/TolQ/ExbB proton channel [Desulfatibacillum alkenivorans
AK-01]
gi|218760251|gb|ACL02717.1| Chemotaxis protein MotA [Desulfatibacillum alkenivorans AK-01]
Length = 253
Score = 41.3 bits (96), Expect = 0.10, Method: Composition-based stats.
Identities = 11/77 (14%), Positives = 32/77 (41%), Gaps = 4/77 (5%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI 172
I +M+ I + ++ + +G++G ++G++ QS+ +
Sbjct: 122 IREIMETEINYTMNRHKLGADLFTTIGTFAPALGMVGTLIGLVQMLQSM----EDPSSIG 177
Query: 173 PGIIESLISILLGLCVS 189
P + +L++ G ++
Sbjct: 178 PAMAVALLTTFYGAILA 194
>gi|56421065|ref|YP_148383.1| flagellar motor protein MotA [Geobacillus kaustophilus HTA426]
gi|56380907|dbj|BAD76815.1| motility protein A (flagellar motor rotation) [Geobacillus
kaustophilus HTA426]
Length = 263
Score = 41.3 bits (96), Expect = 0.10, Method: Composition-based stats.
Identities = 16/96 (16%), Positives = 37/96 (38%), Gaps = 7/96 (7%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
Q+ I +M I E + + +G+LGAV+G++ ++ N
Sbjct: 122 QEFIRDVMTEEIVAMEERHEANAAIFSQAGTYAPTLGVLGAVIGLIAALGNM----ENIA 177
Query: 170 VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKK 205
I + ++ +LG+ + ++ F ++
Sbjct: 178 ELGKAISAAFVATMLGIFTG---YVLWHPFANKLRR 210
>gi|258592567|emb|CBE68876.1| MotA/TolQ/ExbB proton channel precursor [NC10 bacterium 'Dutch
sediment']
Length = 252
Score = 41.3 bits (96), Expect = 0.10, Method: Composition-based stats.
Identities = 12/77 (15%), Positives = 27/77 (35%), Gaps = 3/77 (3%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI 172
+ +M I + + G M +GI+G V+G++ +
Sbjct: 126 VREIMQAEIHSMKARHVKGIEIFGIMGGYAPTMGIIGTVMGLVHVLSKL---GEGTDSLG 182
Query: 173 PGIIESLISILLGLCVS 189
GI + ++ G+ +
Sbjct: 183 RGIAVAFLATFYGIFSA 199
>gi|308173339|ref|YP_003920044.1| motility protein MotA [Bacillus amyloliquefaciens DSM 7]
gi|307606203|emb|CBI42574.1| motility protein A; MotA component of the stator flagellum complex
[Bacillus amyloliquefaciens DSM 7]
gi|328553735|gb|AEB24227.1| flagellar motor protein MotA [Bacillus amyloliquefaciens TA208]
gi|328911415|gb|AEB63011.1| motility protein A; MotA component of the stator flagellum complex
[Bacillus amyloliquefaciens LL3]
Length = 271
Score = 41.3 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 16/99 (16%), Positives = 39/99 (39%), Gaps = 7/99 (7%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ I +M + + + + +G+LGAV+G++ ++ +N
Sbjct: 123 EFIRDIMTEEVEAMEDRHQAGAAIFTQAGTYAPTLGVLGAVIGLIAALSNM----NNTEA 178
Query: 171 SIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQ 209
I + ++ LLG+ + ++ F K+ + Q
Sbjct: 179 LGHAISAAFVATLLGIFTG---YVLWHPFANKLKRKSKQ 214
>gi|30019772|ref|NP_831403.1| flagellar motor protein MotP [Bacillus cereus ATCC 14579]
gi|29895317|gb|AAP08604.1| Chemotaxis motA protein [Bacillus cereus ATCC 14579]
Length = 254
Score = 41.3 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 14/86 (16%), Positives = 39/86 (45%), Gaps = 8/86 (9%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
+D + ++ I E+ E+ + + L + G++G ++G++ Q++ +
Sbjct: 118 EDELKEVLLKDIETEVYELRKGAALLDKIGDFAPAWGMIGTLIGLIIMLQNL----QDTS 173
Query: 170 VSIPGIIESLISILLGLC----VSIP 191
G+ ++++ L G ++IP
Sbjct: 174 QIGTGMAVAMLTTLYGSVLANMIAIP 199
>gi|170727810|ref|YP_001761836.1| flagellar motor protein PomA [Shewanella woodyi ATCC 51908]
gi|169813157|gb|ACA87741.1| MotA/TolQ/ExbB proton channel [Shewanella woodyi ATCC 51908]
Length = 255
Score = 41.3 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 13/79 (16%), Positives = 35/79 (44%), Gaps = 4/79 (5%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
D + ++ IA + +S ++ +G++G ++G++G ++ +
Sbjct: 119 DVVRDALEKDIALTEQRHKLGISIFSTVGDVAPAMGMIGTLVGLVGMLSNM----DDPKS 174
Query: 171 SIPGIIESLISILLGLCVS 189
P + +L++ L G V+
Sbjct: 175 IGPAMAIALLTTLYGAMVA 193
>gi|168182735|ref|ZP_02617399.1| chemotaxis protein MotA [Clostridium botulinum Bf]
gi|237796092|ref|YP_002863644.1| chemotaxis MotA protein [Clostridium botulinum Ba4 str. 657]
gi|182674180|gb|EDT86141.1| chemotaxis protein MotA [Clostridium botulinum Bf]
gi|229261249|gb|ACQ52282.1| chemotaxis protein MotA [Clostridium botulinum Ba4 str. 657]
Length = 270
Score = 41.3 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 11/79 (13%), Positives = 32/79 (40%), Gaps = 4/79 (5%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ I +M++ I + L + G++G ++G++ ++ +
Sbjct: 125 ETIRDIMELEIDEMEKRHKSGADMLKTWGGYSPAFGMIGTLIGLIQMLANLTDSSTI--- 181
Query: 171 SIPGIIESLISILLGLCVS 189
G+ ++LI+ G ++
Sbjct: 182 -ASGMGKALITTFYGSVMA 199
>gi|154685778|ref|YP_001420939.1| flagellar motor protein MotA [Bacillus amyloliquefaciens FZB42]
gi|154351629|gb|ABS73708.1| MotA [Bacillus amyloliquefaciens FZB42]
Length = 271
Score = 41.3 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 16/99 (16%), Positives = 39/99 (39%), Gaps = 7/99 (7%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ I +M + + + + +G+LGAV+G++ ++ +N
Sbjct: 123 EFIRDIMTEEVEAMEDRHQAGAAIFTQAGTYAPTLGVLGAVIGLIAALSNM----NNTEA 178
Query: 171 SIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQ 209
I + ++ LLG+ + ++ F K+ + Q
Sbjct: 179 LGHAISAAFVATLLGIFTG---YVLWHPFANKLKRKSKQ 214
>gi|89069808|ref|ZP_01157143.1| flagellar motor protein [Oceanicola granulosus HTCC2516]
gi|89044609|gb|EAR50725.1| flagellar motor protein [Oceanicola granulosus HTCC2516]
Length = 289
Score = 41.3 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 19/116 (16%), Positives = 47/116 (40%), Gaps = 7/116 (6%)
Query: 74 KSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLS 133
+ I ++ + + +S P +++ +++ +D ++ +L
Sbjct: 109 AIFGRYPKISADGEALALICDTLRSASMNYDDPHQVEEVLEKRIDASLHHKLHSTHA--- 165
Query: 134 FLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVS 189
L +++ +GI+ AVLG++ SI V I +L+ LG+ ++
Sbjct: 166 -LQTIADGLPALGIVAAVLGVIKTMASI---DQPPEVLGKLIGGALVGTFLGVFLA 217
>gi|322806982|emb|CBZ04552.1| flagellar motor rotation protein MotA [Clostridium botulinum H04402
065]
Length = 270
Score = 41.3 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 11/79 (13%), Positives = 32/79 (40%), Gaps = 4/79 (5%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ I +M++ I + L + G++G ++G++ ++ +
Sbjct: 125 ETIRDIMELEIDEMEKRHKSGADMLKTWGGYSPAFGMIGTLIGLIQMLANLTDSSTI--- 181
Query: 171 SIPGIIESLISILLGLCVS 189
G+ ++LI+ G ++
Sbjct: 182 -ASGMGKALITTFYGSVMA 199
>gi|288942519|ref|YP_003444759.1| MotA/TolQ/ExbB proton channel [Allochromatium vinosum DSM 180]
gi|288897891|gb|ADC63727.1| MotA/TolQ/ExbB proton channel [Allochromatium vinosum DSM 180]
Length = 252
Score = 41.3 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 10/79 (12%), Positives = 35/79 (44%), Gaps = 4/79 (5%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ + +++ I ++ S + + +G++G ++G++ ++ S+
Sbjct: 119 EVVQKVLSKDINLAIQRQEAGYSVFKATAEVAPAMGMIGTLIGLVQMLANM----SDPKA 174
Query: 171 SIPGIIESLISILLGLCVS 189
P + +L++ L G ++
Sbjct: 175 IGPAMAVALLTTLYGAVLA 193
>gi|170758802|ref|YP_001787973.1| chemotaxis MotA protein [Clostridium botulinum A3 str. Loch Maree]
gi|169405791|gb|ACA54202.1| chemotaxis protein MotA [Clostridium botulinum A3 str. Loch Maree]
Length = 270
Score = 41.3 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 11/79 (13%), Positives = 32/79 (40%), Gaps = 4/79 (5%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ I +M++ I + L + G++G ++G++ ++ +
Sbjct: 125 ETIRDIMELEIDEMEKRHKSGADMLKTWGGYSPAFGMIGTLIGLIQMLANLTDSSTI--- 181
Query: 171 SIPGIIESLISILLGLCVS 189
G+ ++LI+ G ++
Sbjct: 182 -ASGMGKALITTFYGSVMA 199
>gi|170755265|ref|YP_001782269.1| chemotaxis MotA protein [Clostridium botulinum B1 str. Okra]
gi|169120477|gb|ACA44313.1| chemotaxis protein MotA [Clostridium botulinum B1 str. Okra]
Length = 270
Score = 41.3 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 11/79 (13%), Positives = 32/79 (40%), Gaps = 4/79 (5%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ I +M++ I + L + G++G ++G++ ++ +
Sbjct: 125 ETIRDIMELEIDEMEKRHKSGADMLKTWGGYSPAFGMIGTLIGLIQMLANLTDSSTI--- 181
Query: 171 SIPGIIESLISILLGLCVS 189
G+ ++LI+ G ++
Sbjct: 182 -ASGMGKALITTFYGSVMA 199
>gi|168180923|ref|ZP_02615587.1| chemotaxis MotA protein [Clostridium botulinum NCTC 2916]
gi|182668370|gb|EDT80349.1| chemotaxis MotA protein [Clostridium botulinum NCTC 2916]
Length = 270
Score = 41.3 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 11/79 (13%), Positives = 32/79 (40%), Gaps = 4/79 (5%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ I +M++ I + L + G++G ++G++ ++ +
Sbjct: 125 ETIRDIMELEIDEMEKRHKSGADMLKTWGGYSPAFGMIGTLIGLIQMLANLTDSSTI--- 181
Query: 171 SIPGIIESLISILLGLCVS 189
G+ ++LI+ G ++
Sbjct: 182 -ASGMGKALITTFYGSVMA 199
>gi|90579838|ref|ZP_01235646.1| flagellar motor protein [Vibrio angustum S14]
gi|90438723|gb|EAS63906.1| flagellar motor protein [Vibrio angustum S14]
Length = 253
Score = 41.3 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 14/85 (16%), Positives = 34/85 (40%), Gaps = 8/85 (9%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
D + + I+ E + + S +G++G ++G++ ++ +
Sbjct: 119 DVVRGTLQKDISLTNERHEQGVGIFSSFGDVAPAMGMIGTLIGLVAMLSNM----DDPKA 174
Query: 171 SIPGIIESLISILLGL----CVSIP 191
P + +L++ L G V+IP
Sbjct: 175 IGPAMAVALLTTLYGSMLANMVAIP 199
>gi|147678454|ref|YP_001212669.1| flagellar motor component [Pelotomaculum thermopropionicum SI]
gi|146274551|dbj|BAF60300.1| flagellar motor component [Pelotomaculum thermopropionicum SI]
Length = 262
Score = 41.3 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 15/79 (18%), Positives = 32/79 (40%), Gaps = 4/79 (5%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ + R+M+ + E S + +GILG V+G++ ++ +
Sbjct: 122 ELVRRIMETEMYAIQERHHSSASIFEAAGGYAPTMGILGTVMGLVHVLSNL----ESPET 177
Query: 171 SIPGIIESLISILLGLCVS 189
P I + I+ L G+ +
Sbjct: 178 LGPSIALAFIATLYGVGSA 196
>gi|297529304|ref|YP_003670579.1| MotA/TolQ/ExbB proton channel [Geobacillus sp. C56-T3]
gi|297252556|gb|ADI26002.1| MotA/TolQ/ExbB proton channel [Geobacillus sp. C56-T3]
Length = 263
Score = 41.3 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 16/96 (16%), Positives = 37/96 (38%), Gaps = 7/96 (7%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
Q+ I +M I E + + +G+LGAV+G++ ++ N
Sbjct: 122 QEFIRDVMTEEIVAMEERHEANAAIFTQAGTYAPTLGVLGAVVGLIAALGNM----DNIS 177
Query: 170 VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKK 205
I + ++ +LG+ + ++ F ++
Sbjct: 178 ELGHAISAAFVATMLGIFTG---YVLWHPFANKLRR 210
>gi|261418452|ref|YP_003252134.1| flagellar motor protein MotA [Geobacillus sp. Y412MC61]
gi|319767587|ref|YP_004133088.1| MotA/TolQ/ExbB proton channel [Geobacillus sp. Y412MC52]
gi|261374909|gb|ACX77652.1| MotA/TolQ/ExbB proton channel [Geobacillus sp. Y412MC61]
gi|317112453|gb|ADU94945.1| MotA/TolQ/ExbB proton channel [Geobacillus sp. Y412MC52]
Length = 263
Score = 41.3 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 16/96 (16%), Positives = 37/96 (38%), Gaps = 7/96 (7%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
Q+ I +M I E + + +G+LGAV+G++ ++ N
Sbjct: 122 QEFIRDVMTEEIVAMEERHEANAAIFSQAGTYAPTLGVLGAVIGLIAALGNM----ENIA 177
Query: 170 VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKK 205
I + ++ +LG+ + ++ F ++
Sbjct: 178 ELGKAISAAFVATMLGIFTG---YVLWHPFANKLRR 210
>gi|149922277|ref|ZP_01910714.1| hypothetical protein PPSIR1_07515 [Plesiocystis pacifica SIR-1]
gi|149816910|gb|EDM76396.1| hypothetical protein PPSIR1_07515 [Plesiocystis pacifica SIR-1]
Length = 163
Score = 41.3 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 21/101 (20%), Positives = 46/101 (45%), Gaps = 2/101 (1%)
Query: 116 MMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSN--NVVSIP 173
+ ++ EL + LS L + S L++G+L A+ ++ F++ AG +V +
Sbjct: 47 AVHTSLLEELHRLRRGLSTLTGLGSVALMLGVLSAIFELLVPFRNFAGPPLEPYSVRVVR 106
Query: 174 GIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFA 214
++ + LGL V++ + ++ A ++E A
Sbjct: 107 DAADAFGPVGLGLGVAVIAVACRAALAFRVEQIADRLEQAA 147
>gi|152975139|ref|YP_001374656.1| flagellar motor protein MotP [Bacillus cereus subsp. cytotoxis NVH
391-98]
gi|152023891|gb|ABS21661.1| MotA/TolQ/ExbB proton channel [Bacillus cytotoxicus NVH 391-98]
Length = 277
Score = 41.3 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 12/80 (15%), Positives = 36/80 (45%), Gaps = 4/80 (5%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
+D + ++ I E+ E+ + L + G++G ++G++ Q++ +
Sbjct: 141 EDELREILTKDIETEVYELKKGAILLDKIGDFAPAWGMIGTLIGLIIMLQNL----QDTS 196
Query: 170 VSIPGIIESLISILLGLCVS 189
G+ ++++ L G ++
Sbjct: 197 QIGTGMAVAMLTTLYGSVIA 216
>gi|148380610|ref|YP_001255151.1| chemotaxis MotA protein [Clostridium botulinum A str. ATCC 3502]
gi|153933911|ref|YP_001384896.1| chemotaxis MotA protein [Clostridium botulinum A str. ATCC 19397]
gi|153934553|ref|YP_001388365.1| chemotaxis MotA protein [Clostridium botulinum A str. Hall]
gi|148290094|emb|CAL84213.1| putative chemotaxis MotA protein [Clostridium botulinum A str. ATCC
3502]
gi|152929955|gb|ABS35455.1| chemotaxis protein MotA [Clostridium botulinum A str. ATCC 19397]
gi|152930467|gb|ABS35966.1| chemotaxis protein MotA [Clostridium botulinum A str. Hall]
Length = 270
Score = 41.3 bits (96), Expect = 0.12, Method: Composition-based stats.
Identities = 11/79 (13%), Positives = 32/79 (40%), Gaps = 4/79 (5%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ I +M++ I + L + G++G ++G++ ++ +
Sbjct: 125 ETIRDIMELEIDEMEKRHKSGADMLKTWGGYSPAFGMIGTLIGLIQMLANLTDSSTI--- 181
Query: 171 SIPGIIESLISILLGLCVS 189
G+ ++LI+ G ++
Sbjct: 182 -ASGMGKALITTFYGSVMA 199
>gi|77919254|ref|YP_357069.1| hypothetical protein Pcar_1655 [Pelobacter carbinolicus DSM 2380]
gi|77545337|gb|ABA88899.1| hypothetical protein Pcar_1655 [Pelobacter carbinolicus DSM 2380]
Length = 223
Score = 41.3 bits (96), Expect = 0.12, Method: Composition-based stats.
Identities = 22/138 (15%), Positives = 53/138 (38%), Gaps = 10/138 (7%)
Query: 85 AAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI--TEKLSFLGSMSSAG 142
A+ F +++ +G + D + A + E + L +G M++
Sbjct: 86 ASFFARTKLHYEQEQQRGTADKVIPPDAF---IRDAAFQFSERYFEEKFLDPVGMMANLM 142
Query: 143 LLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGL----CVSIPSSIAYNK 198
+G +G ++GM+ F + +G N+ +++ GI +L + + L + + Y
Sbjct: 143 PPMGFIGTIIGMVVHFLANSGT-LNSEITVAGIATALYTTFIALICFTFLEFLRKVFYAL 201
Query: 199 FIEDSKKFAMQMEGFANE 216
+ + A +
Sbjct: 202 AHRRIDEGLAAIAQLAVD 219
>gi|254683215|ref|ZP_05147076.1| flagellar motor protein MotP [Bacillus anthracis str. CNEVA-9066]
gi|254740976|ref|ZP_05198664.1| flagellar motor protein MotP [Bacillus anthracis str. Kruger B]
Length = 254
Score = 41.3 bits (96), Expect = 0.12, Method: Composition-based stats.
Identities = 12/86 (13%), Positives = 39/86 (45%), Gaps = 8/86 (9%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
++ + ++ + E+ E+ + + L + G++G ++G++ Q++ +
Sbjct: 118 EEELKEVLMKDVETEVYELRKGAALLDKIGDFAPAWGMIGTLIGLIIMLQNL----QDTS 173
Query: 170 VSIPGIIESLISILLGLC----VSIP 191
G+ ++++ L G ++IP
Sbjct: 174 QIGTGMAVAMLTTLYGSVLANMIAIP 199
>gi|153939356|ref|YP_001391953.1| chemotaxis MotA protein [Clostridium botulinum F str. Langeland]
gi|152935252|gb|ABS40750.1| chemotaxis MotA protein [Clostridium botulinum F str. Langeland]
gi|295319972|gb|ADG00350.1| chemotaxis MotA protein [Clostridium botulinum F str. 230613]
Length = 270
Score = 41.3 bits (96), Expect = 0.12, Method: Composition-based stats.
Identities = 13/87 (14%), Positives = 37/87 (42%), Gaps = 7/87 (8%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ I +M++ I + L + G++G ++G++ ++ +
Sbjct: 125 ETIRDIMELEIDEMEKRHKSGADMLKTWGGYSPAFGMIGTLIGLIQMLANLTDSSTI--- 181
Query: 171 SIPGIIESLISILLGLCVSIPSSIAYN 197
G+ ++LI+ G S+ +++ +N
Sbjct: 182 -ASGMGKALITTFYG---SVMANMVFN 204
>gi|228984811|ref|ZP_04144983.1| Chemotaxis protein, MotA [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|228775009|gb|EEM23403.1| Chemotaxis protein, MotA [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
Length = 251
Score = 40.9 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 12/86 (13%), Positives = 39/86 (45%), Gaps = 8/86 (9%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
++ + ++ + E+ E+ + + L + G++G ++G++ Q++ +
Sbjct: 115 EEELKEVLMKDVETEVYELRKGAALLDKIGDFAPAWGMIGTLIGLIIMLQNL----QDTS 170
Query: 170 VSIPGIIESLISILLGLC----VSIP 191
G+ ++++ L G ++IP
Sbjct: 171 QIGTGMAVAMLTTLYGSVLANMIAIP 196
>gi|92117048|ref|YP_576777.1| MotA/TolQ/ExbB proton channel [Nitrobacter hamburgensis X14]
gi|91799942|gb|ABE62317.1| MotA/TolQ/ExbB proton channel [Nitrobacter hamburgensis X14]
Length = 257
Score = 40.9 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 17/123 (13%), Positives = 45/123 (36%), Gaps = 7/123 (5%)
Query: 67 QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
L + + + +GL + +E + + + I ++ L
Sbjct: 79 DELARIAEIARKQGPVGLEKV---ETNEPFLAKGIRFVADGYDLEFIRDNLERDRDNFLM 135
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGL 186
+ E ++ G++G ++GM+ F ++ ++ P + +L++ L G
Sbjct: 136 HLDEGSKIYRAIGDCAPAFGMIGTLIGMVQMFANM----TDPSKLGPFMATALLATLYGA 191
Query: 187 CVS 189
V+
Sbjct: 192 LVA 194
>gi|320106353|ref|YP_004181943.1| MotA/TolQ/ExbB proton channel [Terriglobus saanensis SP1PR4]
gi|319924874|gb|ADV81949.1| MotA/TolQ/ExbB proton channel [Terriglobus saanensis SP1PR4]
Length = 256
Score = 40.9 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 21/132 (15%), Positives = 48/132 (36%), Gaps = 10/132 (7%)
Query: 67 QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQD--RIDRMMDVAIARE 124
+L + G+ ++ + + + + ++M + + +
Sbjct: 76 ATLNQLVGFANKARKSGIVSLDADLAKVSDPFLRRALMLAVDGTEPSEVRKIMRMELDNK 135
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILL 184
E + L S VGI+GAVLG++ Q + N GI + ++ +
Sbjct: 136 AEYEEKIPQVLESAGGFSPTVGIIGAVLGLIQVMQHL----DNIDEVGKGIATAFVATIY 191
Query: 185 GLCVS----IPS 192
G+ ++ IP+
Sbjct: 192 GVALANLICIPA 203
>gi|289523563|ref|ZP_06440417.1| chemotaxis protein PomA [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
gi|289503255|gb|EFD24419.1| chemotaxis protein PomA [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
Length = 245
Score = 40.9 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 18/111 (16%), Positives = 41/111 (36%), Gaps = 5/111 (4%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ + ++D I E + + G+LG ++G++ ++ ++
Sbjct: 107 ELVKSILDTEIGLLEERHAGNKFMFDTFAELAPAFGMLGTLIGLIQMLGNL----NDPDA 162
Query: 171 SIPGIIESLISILLG-LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAI 220
PG+ +LI+ G + +I K +++ M E AI
Sbjct: 163 LGPGMAVALITTFYGSMMANIFGIPIARKLTVRTQEEVMTREMVVEGILAI 213
>gi|149375612|ref|ZP_01893381.1| Flagellar motor component [Marinobacter algicola DG893]
gi|149360014|gb|EDM48469.1| Flagellar motor component [Marinobacter algicola DG893]
Length = 257
Score = 40.9 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 21/192 (10%), Positives = 64/192 (33%), Gaps = 31/192 (16%)
Query: 23 AVKCIITLLFIF----SILS------WSVIIQKSVNFITLRRQFREFEQLFW---SGQSL 69
V ++ +L SIL+ ++++ + ++ + F S
Sbjct: 9 LVAGVLIVLLAMLANASILTFFNLPGLAIVLGGTFAVTLIKFRLPSVMSAFRLAFSAAFK 68
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQ------------DRIDRMM 117
+ V + + +G A+ + E + + +Q + ++ +
Sbjct: 69 DRVERPAELIREVGTLALVVR--KEGILGLENHTTNNEFLQKAINLCVDGHPPELVEEAL 126
Query: 118 DVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIE 177
+ E + + +G+LG ++G++ ++ + P +
Sbjct: 127 AQETQQTAERYEVSERVFRGIGESAPAIGMLGTLVGLVQMLNTL----DDPSSIGPAMAI 182
Query: 178 SLISILLGLCVS 189
+L++ L G ++
Sbjct: 183 ALLTTLYGAFIA 194
>gi|145298368|ref|YP_001141209.1| MotA/TolQ/ExbB proton channel [Aeromonas salmonicida subsp.
salmonicida A449]
gi|142851140|gb|ABO89461.1| MotA/TolQ/ExbB proton channel [Aeromonas salmonicida subsp.
salmonicida A449]
Length = 245
Score = 40.9 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 23/153 (15%), Positives = 52/153 (33%), Gaps = 8/153 (5%)
Query: 61 QLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVA 120
L + L+ + + L E+ + + I+D I +++
Sbjct: 70 DLLNQAERLQGWAVFARQQGLLALENQADQESDEFTRQGLTMIVDGVSIED-IRMLLEAD 128
Query: 121 IARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLI 180
I E E +M +GI+GAV+G++ ++ + GI + +
Sbjct: 129 IDIEQERNEHSARVFEAMGGYSPTIGIIGAVIGLIQAMFNL----EDPAALGAGIAVAFV 184
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGF 213
+ + G+ + ++ Y + F F
Sbjct: 185 ATIYGVGFA---NLFYLPIANRLRAFHYHYALF 214
>gi|292492680|ref|YP_003528119.1| MotA/TolQ/ExbB proton channel [Nitrosococcus halophilus Nc4]
gi|291581275|gb|ADE15732.1| MotA/TolQ/ExbB proton channel [Nitrosococcus halophilus Nc4]
Length = 254
Score = 40.9 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 31/199 (15%), Positives = 71/199 (35%), Gaps = 24/199 (12%)
Query: 9 MDI-SIFALFMQMGLAVKCIITL---LFIF---SIL-----SWSVIIQKSVNFITLRRQF 56
MD+ ++ L G+ I+ L F SIL + +V++ K + F
Sbjct: 1 MDLATLIGLISSFGVVAGAILLGSSVLVFFNPPSILIVLGGTIAVVLMK-FSLSQFLGSF 59
Query: 57 REFEQLFW-SGQSLETVCKSLKNHHNIGLAAIFMSAMS-----EWKKSCDKGARSPIGIQ 110
+ + F + E + K N ++ S E+ K
Sbjct: 60 KVAMKAFVYKAEKPEEIIKQALEMANTARKDGLLALESWDIKNEFMK-KGVTLLVDGHEP 118
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ + R++ + + LE ++ +G++G ++G++ S+ +
Sbjct: 119 EMVRRVLMTELRQTLERHDLGQKIFRAIGDVAPAMGMIGTLIGLVQMLSSM----DDPKK 174
Query: 171 SIPGIIESLISILLGLCVS 189
P + +L++ L G ++
Sbjct: 175 IGPAMAVALLTTLYGAMIA 193
>gi|32475798|ref|NP_868792.1| chemotaxis pomA protein [Rhodopirellula baltica SH 1]
gi|32446341|emb|CAD76169.1| chemotaxis pomA protein [Rhodopirellula baltica SH 1]
gi|327540986|gb|EGF27542.1| chemotaxis pomA protein [Rhodopirellula baltica WH47]
Length = 253
Score = 40.9 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 23/159 (14%), Positives = 61/159 (38%), Gaps = 8/159 (5%)
Query: 49 FITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIG 108
I L+ + E +S+ + + + + L + + K+ + A
Sbjct: 61 IIALKVILNKGEDRLALIKSIVELAEIARRDGLLALESKIGEINNSLVKTGLQMAVDGTA 120
Query: 109 IQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN 168
+ ++ ++ +A E S + + G++G ++G++ Q + S+
Sbjct: 121 -PEIVEEVLRTEVAGMAMRHREGKSIMDQLGRFAPAYGMIGTLMGLIMMLQDM----SDP 175
Query: 169 VVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFA 207
G+ +LI+ L G +I +++ ++ F E +
Sbjct: 176 SGIGAGMAVALITTLYG---AIVANVFFSPFAEKLGLMS 211
>gi|127513696|ref|YP_001094893.1| flagellar motor protein PomA [Shewanella loihica PV-4]
gi|126638991|gb|ABO24634.1| MotA/TolQ/ExbB proton channel [Shewanella loihica PV-4]
Length = 255
Score = 40.9 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 26/189 (13%), Positives = 65/189 (34%), Gaps = 10/189 (5%)
Query: 6 LAIMDISIFALFMQMGLAVKC-IITLLFIFSILSWSVIIQKS---VNFITLRRQFREFEQ 61
+ I A+ G+A+ + ++L + I S V++ K ++ + F
Sbjct: 10 IGAFGFIIGAMVSSGGIAIFVDVPSVLIVM-IGSLFVVMMKFNLKQFLGAVKIAAKAFMF 68
Query: 62 LFWSGQSL-ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVA 120
L E G A+ + +S + + ++
Sbjct: 69 KIDKPDELIEQSVTMADAARKGGFLALEEAEISNSFMQKAVDMLVDGHDGEVVREALEKD 128
Query: 121 IARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLI 180
IA E +S ++ +G++G ++G++ ++ + P + +L+
Sbjct: 129 IALTEERHKTGISIFKALGDVAPAMGMIGTLIGLVAMLSNM----DDPKSIGPAMAVALL 184
Query: 181 SILLGLCVS 189
+ L G ++
Sbjct: 185 TTLYGAIIA 193
>gi|332534967|ref|ZP_08410785.1| flagellar motor rotation protein MotA [Pseudoalteromonas
haloplanktis ANT/505]
gi|332035585|gb|EGI72077.1| flagellar motor rotation protein MotA [Pseudoalteromonas
haloplanktis ANT/505]
Length = 238
Score = 40.9 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 13/85 (15%), Positives = 33/85 (38%), Gaps = 8/85 (9%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
D + + I+ S++ +G++G ++G++ ++ +
Sbjct: 104 DVVRATLQKDISLTTTRHEMGAGLFKSLADIAPAMGMIGTLIGLVAMLSNM----DDPKA 159
Query: 171 SIPGIIESLISILLGLC----VSIP 191
P + +L++ L G V+IP
Sbjct: 160 IGPAMAVALLTTLYGAFLANVVAIP 184
>gi|126697828|ref|YP_001086725.1| chemotaxis protein [Clostridium difficile 630]
gi|255099424|ref|ZP_05328401.1| chemotaxis protein [Clostridium difficile QCD-63q42]
gi|115249265|emb|CAJ67078.1| Flagellar motor rotation protein MotA [Clostridium difficile]
Length = 272
Score = 40.9 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 14/88 (15%), Positives = 37/88 (42%), Gaps = 6/88 (6%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI 172
I ++++ I + + + G+LG ++G++ + ++ +
Sbjct: 128 IRSILELEIDSVEDTNNRYSKLFKTWGTFAPAFGMLGTLIGLIQMLADL----TSPDLIA 183
Query: 173 PGIIESLISILLGLCVSIPSS--IAYNK 198
G+ ++LI+ G ++ + IAYN
Sbjct: 184 SGMGKALITTFYGSLLANIALNPIAYNI 211
>gi|91792150|ref|YP_561801.1| MotA/TolQ/ExbB proton channel [Shewanella denitrificans OS217]
gi|91714152|gb|ABE54078.1| MotA/TolQ/ExbB proton channel [Shewanella denitrificans OS217]
Length = 264
Score = 40.9 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 24/167 (14%), Positives = 60/167 (35%), Gaps = 10/167 (5%)
Query: 43 IQKSVNFITLRRQFREFEQLFWSGQ--------SLETVCKSLKNHHNIGLAAIFMSAMSE 94
+ K++ R+ + + L+ L A+ S +
Sbjct: 43 LSKNLKLHKRRKHCLDALDTLLASPRVVANKACELDGSASQAHEPQIQPLIALLESQKTM 102
Query: 95 WKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGM 154
C + + + ++ + + ++ +++ L L ++ L+G+LG VLG+
Sbjct: 103 LASGCLALLQQAQQTKSLREEVLGLWLVQKHQQLHAGLKLLQTLGVITPLLGLLGTVLGL 162
Query: 155 MGFFQSIAGYYS--NNVVSIPGIIESLISILLGLCVSIPSSIAYNKF 199
+ F + G+ ++ + GL +++PS A + F
Sbjct: 163 IAMFTELGQSQGPVTPAQLSQGLGLAMNTTAAGLLIAVPSISAAHLF 209
>gi|242280811|ref|YP_002992940.1| cyclic nucleotide-binding protein [Desulfovibrio salexigens DSM
2638]
gi|242123705|gb|ACS81401.1| cyclic nucleotide-binding protein [Desulfovibrio salexigens DSM
2638]
Length = 251
Score = 40.9 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 20/179 (11%), Positives = 65/179 (36%), Gaps = 14/179 (7%)
Query: 41 VIIQKSVNFITLRRQFREFEQLFWSGQS----LETVCKSLKNHHNIGLAAIFMSAMSEWK 96
++ V + + F F + ++ + + L A+ A+ +
Sbjct: 48 IMFPMGVVLKAFKIALKGF---FAKSEDPKIMIDQIVALAETARKESLVALEKVAIDDEY 104
Query: 97 KSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMG 156
+ D + +M+ I + + + + M + G++G ++G++
Sbjct: 105 LKKGVILVADGTDGDLVRSIMEFEIDAMKKRHFQGQAVMKGMGAMAPAFGMIGTLIGLVQ 164
Query: 157 FFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFAN 215
++ S+ P + +L++ L G SI +++ + + ++ +++ +
Sbjct: 165 MLSNL----SDPDAIGPAMAVALLTTLYG---SILANVIFLPLAKKLEERSIEEASYME 216
>gi|119897399|ref|YP_932612.1| flagellar motor protein [Azoarcus sp. BH72]
gi|119669812|emb|CAL93725.1| flagellar motor protein MotA [Azoarcus sp. BH72]
Length = 246
Score = 40.9 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 24/111 (21%), Positives = 46/111 (41%), Gaps = 7/111 (6%)
Query: 112 RIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVS 171
R+ +++V I ++ + S VGILGAV+G++ +++ S+
Sbjct: 123 RLREVLEVEIGAWEAQLRQCARIWESAGGYAPTVGILGAVMGLIHVMENL----SDPAKL 178
Query: 172 IPGIIESLISILLGLCVS--IPSSIAYNKFIEDSKKFAMQMEGFANEFSAI 220
GI + ++ + G+ + I IA K + Q E F + I
Sbjct: 179 GSGIAVAFVATIYGVGSANLIFLPIA-KKLLAHIGTLVAQREMFVDGLVGI 228
>gi|71906383|ref|YP_283970.1| flagellar motor protein [Dechloromonas aromatica RCB]
gi|71846004|gb|AAZ45500.1| MotA/TolQ/ExbB proton channel [Dechloromonas aromatica RCB]
Length = 246
Score = 40.9 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 21/128 (16%), Positives = 51/128 (39%), Gaps = 8/128 (6%)
Query: 83 GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAG 142
L + E+ + +RI +++V I +E + +
Sbjct: 95 ALENYIPAIKDEFAR-RGLQLLVDGADPERIRELLEVEINTFEDEWRQSAKIWEAAGGYS 153
Query: 143 LLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIED 202
+GILGAV+G++ +++ S+ GI + ++ + G+ ++ ++ Y
Sbjct: 154 PTIGILGAVMGLIHVMENL----SDPTKLGAGIAVAFVATIYGVGLA---NLVYLPIAAK 206
Query: 203 SKKFAMQM 210
K + ++M
Sbjct: 207 LKYYILRM 214
>gi|304410449|ref|ZP_07392067.1| MotA/TolQ/ExbB proton channel [Shewanella baltica OS183]
gi|307304541|ref|ZP_07584291.1| MotA/TolQ/ExbB proton channel [Shewanella baltica BA175]
gi|304350933|gb|EFM15333.1| MotA/TolQ/ExbB proton channel [Shewanella baltica OS183]
gi|306911943|gb|EFN42367.1| MotA/TolQ/ExbB proton channel [Shewanella baltica BA175]
Length = 249
Score = 40.9 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 30/196 (15%), Positives = 72/196 (36%), Gaps = 9/196 (4%)
Query: 6 LAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS 65
+ I D S Q+G+ L + + L+ + +++S F+ ++ W
Sbjct: 1 MPITDFSTLQ--TQLGVLT----WPLLLCAFLALMICLERSALFLHQTLLSIWPKKQAW- 53
Query: 66 GQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
SL + L A + + + + + ++ + + ++
Sbjct: 54 VMSLRQSSSMATTENVSALLAQTSAQQDLLARGATLLLKQVHQPKVLREELLSLWLNKQQ 113
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYS--NNVVSIPGIIESLISIL 183
++ L L + L+G+LG VLG++ F + G+ ++ +
Sbjct: 114 RDLQAGLKVLQVIGIISPLLGLLGTVLGLIDMFAQLGQSQGPVTPAQLSAGLGLAMNTTA 173
Query: 184 LGLCVSIPSSIAYNKF 199
GL +++P+ A + F
Sbjct: 174 AGLIIAVPAITAAHLF 189
>gi|118581871|ref|YP_903121.1| MotA/TolQ/ExbB proton channel [Pelobacter propionicus DSM 2379]
gi|118504581|gb|ABL01064.1| MotA/TolQ/ExbB proton channel [Pelobacter propionicus DSM 2379]
Length = 249
Score = 40.9 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 21/121 (17%), Positives = 45/121 (37%), Gaps = 6/121 (4%)
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQD--RIDRMMDVAIARELEEI 128
+ GL ++ A + KG + D ++ ++ I +
Sbjct: 80 DIINYATKARRNGLISLEQEAQTAKDPFVKKGISLVVDGIDPQKLRETLEADITAFEDHS 139
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCV 188
+ F + +GI+GAVLG++ ++ S+ GI + ++ + GL V
Sbjct: 140 KHSVEFYEAAGGFSPTIGIIGAVLGLIHVMSNL----SDTSKLGAGIAVAFVATIYGLMV 195
Query: 189 S 189
+
Sbjct: 196 A 196
>gi|88859187|ref|ZP_01133828.1| flagellar motor protein [Pseudoalteromonas tunicata D2]
gi|88819413|gb|EAR29227.1| flagellar motor protein [Pseudoalteromonas tunicata D2]
Length = 253
Score = 40.9 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 18/146 (12%), Positives = 45/146 (30%), Gaps = 9/146 (6%)
Query: 53 RRQFREFEQLFWSGQSL-ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQD 111
+ + F S L E + + G A+ + + D
Sbjct: 60 KVAAKAFMFKIESPDELIEKAVELADSARKGGFLALEEAEIPNSFMQKGINMLVDGHDAD 119
Query: 112 RIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVS 171
+ + I + ++ +G++G ++G++ ++ +
Sbjct: 120 VVRETLQKDITLTSTRHDAGSTLFKALGDVAPAMGMIGTLIGLVAMLSNM----DDPKAI 175
Query: 172 IPGIIESLISILLGLC----VSIPSS 193
P + +L++ L G V+IP
Sbjct: 176 GPAMAVALLTTLYGAFLANVVAIPIV 201
>gi|30261728|ref|NP_844105.1| flagellar motor protein MotP [Bacillus anthracis str. Ames]
gi|47526944|ref|YP_018293.1| flagellar motor protein MotP [Bacillus anthracis str. 'Ames
Ancestor']
gi|49184554|ref|YP_027806.1| flagellar motor protein MotP [Bacillus anthracis str. Sterne]
gi|65318993|ref|ZP_00391952.1| COG1291: Flagellar motor component [Bacillus anthracis str. A2012]
gi|254723804|ref|ZP_05185590.1| flagellar motor protein MotP [Bacillus anthracis str. A1055]
gi|254734567|ref|ZP_05192279.1| flagellar motor protein MotP [Bacillus anthracis str. Western North
America USA6153]
gi|254759754|ref|ZP_05211778.1| flagellar motor protein MotP [Bacillus anthracis str. Australia 94]
gi|300117354|ref|ZP_07055144.1| flagellar motor protein MotP [Bacillus cereus SJ1]
gi|30255956|gb|AAP25591.1| putative chemotaxis protein MotA [Bacillus anthracis str. Ames]
gi|47502092|gb|AAT30768.1| putative chemotaxis protein MotA [Bacillus anthracis str. 'Ames
Ancestor']
gi|49178481|gb|AAT53857.1| chemotaxis protein MotA, putative [Bacillus anthracis str. Sterne]
gi|298725189|gb|EFI65841.1| flagellar motor protein MotP [Bacillus cereus SJ1]
Length = 254
Score = 40.9 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 12/86 (13%), Positives = 39/86 (45%), Gaps = 8/86 (9%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
++ + ++ + E+ E+ + + L + G++G ++G++ Q++ +
Sbjct: 118 EEELKEVLMKDVETEVYELRKGAALLDKIGDFAPAWGMIGTLIGLIIMLQNL----QDTS 173
Query: 170 VSIPGIIESLISILLGLC----VSIP 191
G+ ++++ L G ++IP
Sbjct: 174 QIGTGMAVAMLTTLYGSVLANMIAIP 199
>gi|39998118|ref|NP_954069.1| chemotaxis MotA protein [Geobacter sulfurreducens PCA]
gi|39985063|gb|AAR36419.1| chemotaxis MotA protein [Geobacter sulfurreducens PCA]
gi|298507056|gb|ADI85779.1| chemotaxis MotA protein [Geobacter sulfurreducens KN400]
Length = 254
Score = 40.9 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 20/123 (16%), Positives = 48/123 (39%), Gaps = 6/123 (4%)
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQD--RIDRMMDVAIARELE 126
++ + GL ++ A + KG + D ++ +++ + E
Sbjct: 78 IKDLIGYAAKARRNGLISLEQEAQNVKDPFTKKGISLVVDGIDPQKLRETLEIEVTYYEE 137
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGL 186
+ F + +GI+GAVLG++ ++ S++ GI + ++ + GL
Sbjct: 138 HAKQSAEFFEAAGGYAPTIGIIGAVLGLIHVMGNL----SDSSKLGAGIAVAFVATIYGL 193
Query: 187 CVS 189
+
Sbjct: 194 MTA 196
>gi|149175428|ref|ZP_01854049.1| probable biopolymer transport protein [Planctomyces maris DSM 8797]
gi|148845696|gb|EDL60038.1| probable biopolymer transport protein [Planctomyces maris DSM 8797]
Length = 492
Score = 40.9 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 18/106 (16%), Positives = 42/106 (39%), Gaps = 2/106 (1%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYY--SNNVV 170
+D + E++ S + +++ A ++G LG V+G+ ++ ++
Sbjct: 149 LDEHLKYLAELASEQMHASYSLIRTITWAVPIIGFLGTVIGITIAIANVTPDQLDTSLSE 208
Query: 171 SIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANE 216
G+ + + L L +S+ + +K Q+E F E
Sbjct: 209 VTGGLAVAFDTTALALGLSLILVFSTFIVERMEQKQLEQIELFGIE 254
>gi|316934821|ref|YP_004109803.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris DX-1]
gi|315602535|gb|ADU45070.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris DX-1]
Length = 257
Score = 40.9 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 18/126 (14%), Positives = 44/126 (34%), Gaps = 5/126 (3%)
Query: 65 SGQSL-ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAR 123
S + L + + + G + + + + + I ++
Sbjct: 73 SARDLVDELANIAEIARKSGPVGLEKVEADDPFLAKGIRYVADGYDIEFIRDNLERDRDN 132
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISIL 183
L + E ++ G++G +LGM+ F ++ S+ P + +L++ L
Sbjct: 133 FLLHLNEGSKIYRAIGDCAPAFGMIGTLLGMVQMFSNM----SDPSKLGPFMAVALLATL 188
Query: 184 LGLCVS 189
G V+
Sbjct: 189 YGAVVA 194
>gi|260893487|ref|YP_003239584.1| MotA/TolQ/ExbB proton channel [Ammonifex degensii KC4]
gi|260865628|gb|ACX52734.1| MotA/TolQ/ExbB proton channel [Ammonifex degensii KC4]
Length = 231
Score = 40.9 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 24/202 (11%), Positives = 68/202 (33%), Gaps = 15/202 (7%)
Query: 26 CIITLLFIFSIL---SWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNI 82
++ +FS+ S V + + + + Q F + E + +
Sbjct: 26 AVLLFFIVFSVAELGSLVVECLRERHGRKIIVNIADLLQQFRKERDPEKIKNLVSQSE-- 83
Query: 83 GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAG 142
L +A++E D P+ + R + +IT + +++ G
Sbjct: 84 -LTRRQKNALNELLAHHDL----PVASLQALARQLLTKEELHYAKITGRT---DTVARLG 135
Query: 143 LLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIED 202
++G++ ++ + IA N ++ + + ++GL + + +
Sbjct: 136 PMLGLMATLIPLGPGL--IALSQGNIQKLAESLLTAFDATVIGLAAAAIAFVISQVRKRW 193
Query: 203 SKKFAMQMEGFANEFSAILSRQ 224
+ + +E +L+ +
Sbjct: 194 YEDYLSTLETIMESLLEVLAGE 215
>gi|300853353|ref|YP_003778337.1| chemotaxis protein [Clostridium ljungdahlii DSM 13528]
gi|300433468|gb|ADK13235.1| chemotaxis protein [Clostridium ljungdahlii DSM 13528]
Length = 264
Score = 40.9 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 14/79 (17%), Positives = 33/79 (41%), Gaps = 4/79 (5%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ ++++ + E + S S G +GI+G V+GM+ S+ ++
Sbjct: 124 QAVRDILELELESTSERHKQGASVFESAGGYGPTMGIIGTVMGMVHILGSL----TDTAS 179
Query: 171 SIPGIIESLISILLGLCVS 189
I + ++ L G+ +
Sbjct: 180 LGGKIGSAFLATLYGIGSA 198
>gi|301053264|ref|YP_003791475.1| flagellar motor protein [Bacillus anthracis CI]
gi|300375433|gb|ADK04337.1| flagellar motor protein [Bacillus cereus biovar anthracis str. CI]
Length = 277
Score = 40.9 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 13/86 (15%), Positives = 39/86 (45%), Gaps = 8/86 (9%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
+D + ++ + E+ E+ + + L + G++G ++G++ Q++ +
Sbjct: 141 EDELKEVLIKDVETEVYELRKGAALLDKIGDFAPAWGMIGTLIGLIIMLQNL----QDTS 196
Query: 170 VSIPGIIESLISILLGLC----VSIP 191
G+ ++++ L G ++IP
Sbjct: 197 QIGTGMAVAMLTTLYGSVLANMIAIP 222
>gi|255527287|ref|ZP_05394167.1| MotA/TolQ/ExbB proton channel [Clostridium carboxidivorans P7]
gi|296188355|ref|ZP_06856747.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Clostridium carboxidivorans P7]
gi|255509025|gb|EET85385.1| MotA/TolQ/ExbB proton channel [Clostridium carboxidivorans P7]
gi|296047481|gb|EFG86923.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Clostridium carboxidivorans P7]
Length = 264
Score = 40.6 bits (94), Expect = 0.16, Method: Composition-based stats.
Identities = 12/79 (15%), Positives = 30/79 (37%), Gaps = 4/79 (5%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ ++++ + E + + +GI+G V+G++ + S+
Sbjct: 124 QAVRSILELELESTSERHKKGAAIFAQAGGYAPTLGIIGTVMGLVHILADL----SDPNT 179
Query: 171 SIPGIIESLISILLGLCVS 189
P I ++ L GL +
Sbjct: 180 LGPKIASGFLATLYGLSSA 198
>gi|332669203|ref|YP_004452211.1| MotA/TolQ/ExbB proton channel [Cellulomonas fimi ATCC 484]
gi|332338241|gb|AEE44824.1| MotA/TolQ/ExbB proton channel [Cellulomonas fimi ATCC 484]
Length = 261
Score = 40.6 bits (94), Expect = 0.16, Method: Composition-based stats.
Identities = 19/149 (12%), Positives = 51/149 (34%), Gaps = 13/149 (8%)
Query: 49 FITLRRQFREFEQLFWSG--------QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCD 100
+ F + SG +L ++ + + L S ++ ++
Sbjct: 53 LRDAKESFAAVPRALRSGIPDPTQTVDTLVSLADRARREGLLALEDAARSIDDQFLRAGL 112
Query: 101 KGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQS 160
+ A D + +++ IA + + M +GI+G V+ ++ ++
Sbjct: 113 QAAIDGTD-PDDLRTILEDRIATKRARERAHAKYFQDMGGYAPTIGIIGTVISLVHVLEN 171
Query: 161 IAGYYSNNVVSIPGIIESLISILLGLCVS 189
+ S+ I + ++ L G+ +
Sbjct: 172 L----SDPASLGHSIAAAFVATLWGILSA 196
>gi|86131795|ref|ZP_01050392.1| conserved hypothetical protein [Dokdonia donghaensis MED134]
gi|85817617|gb|EAQ38791.1| conserved hypothetical protein [Dokdonia donghaensis MED134]
Length = 125
Score = 40.6 bits (94), Expect = 0.16, Method: Composition-based stats.
Identities = 15/63 (23%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-VVSIPGIIESLISILL 184
+ + L +G +S L+ G+LG+ +G++ F +I G + + + G+ +L+ +
Sbjct: 38 KRVRNTLELIGHLSLFALMWGLLGSTIGLITAFDAIEGNGNISQPMMAGGLKVALLCTVF 97
Query: 185 GLC 187
GL
Sbjct: 98 GLL 100
>gi|310659035|ref|YP_003936756.1| ytxd [Clostridium sticklandii DSM 519]
gi|308825813|emb|CBH21851.1| YtxD [Clostridium sticklandii]
Length = 260
Score = 40.6 bits (94), Expect = 0.16, Method: Composition-based stats.
Identities = 16/122 (13%), Positives = 44/122 (36%), Gaps = 5/122 (4%)
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ T+ + + L + E+ K + + +++ + +
Sbjct: 79 DIITLANKARKEGLLSLEEATEALDDEFLKKGLMLVVDGTD-PELVRNLLETELDFIEQR 137
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLC 187
SM++A G++G ++G++ S+ + P + +LI+ L G
Sbjct: 138 HKAGQGLFESMATAAPGFGMIGTLIGLINMLGSL----DDPSTIGPSMSVALITTLYGSL 193
Query: 188 VS 189
++
Sbjct: 194 IA 195
>gi|294827704|ref|NP_710843.2| endoflagellar motor protein A [Leptospira interrogans serovar Lai
str. 56601]
gi|293385547|gb|AAN47861.2| endoflagellar motor protein A [Leptospira interrogans serovar Lai
str. 56601]
Length = 244
Score = 40.6 bits (94), Expect = 0.16, Method: Composition-based stats.
Identities = 13/77 (16%), Positives = 33/77 (42%), Gaps = 3/77 (3%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI 172
++ ++ + ++ T L + VGI+G V+G++G +++ +
Sbjct: 121 VEEILFESAMAMEDKETNSAKILETAGGFSPTVGIIGTVMGLVGVLENL---GAGTKALG 177
Query: 173 PGIIESLISILLGLCVS 189
GI + I+ G+ +
Sbjct: 178 EGIATAFIATFYGIAFA 194
>gi|73668343|ref|YP_304358.1| integral membrane protein [Methanosarcina barkeri str. Fusaro]
gi|72395505|gb|AAZ69778.1| outer membrane transport energization protein ExbB [Methanosarcina
barkeri str. Fusaro]
Length = 207
Score = 40.6 bits (94), Expect = 0.16, Method: Composition-based stats.
Identities = 12/125 (9%), Positives = 44/125 (35%), Gaps = 15/125 (12%)
Query: 65 SGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARE 124
++L+N + F +++ +++R ++
Sbjct: 66 QNSDFSEASRALENIKQNYMVTSFAREAAKY-------------LKERHFPAIERLSQEY 112
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILL 184
++ ++L S+ G ++G++G ++ + ++ + I + + ++
Sbjct: 113 ELKMAKRLEHTKITSTIGPMLGLMGTLIPLGPALIGLSKGDLETLAQNLMIAFA--TTVV 170
Query: 185 GLCVS 189
GL +
Sbjct: 171 GLFAA 175
>gi|220924427|ref|YP_002499729.1| MotA/TolQ/ExbB proton channel [Methylobacterium nodulans ORS 2060]
gi|219949034|gb|ACL59426.1| MotA/TolQ/ExbB proton channel [Methylobacterium nodulans ORS 2060]
Length = 292
Score = 40.6 bits (94), Expect = 0.16, Method: Composition-based stats.
Identities = 15/80 (18%), Positives = 33/80 (41%), Gaps = 4/80 (5%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
++ I M+ L + E + G++G +LGM+ F ++ S+
Sbjct: 155 REFIRDTMERDRDNFLMHLEEGSKVYRAFGDCAPAWGMIGTILGMVTMFANM----SDPS 210
Query: 170 VSIPGIIESLISILLGLCVS 189
P + +L++ L G ++
Sbjct: 211 KLGPAMATALLATLYGALIA 230
>gi|325294744|ref|YP_004281258.1| MotA/TolQ/ExbB proton channel [Desulfurobacterium
thermolithotrophum DSM 11699]
gi|325065192|gb|ADY73199.1| MotA/TolQ/ExbB proton channel [Desulfurobacterium
thermolithotrophum DSM 11699]
Length = 253
Score = 40.6 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 12/80 (15%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
+ I + ++A+ ++++ +++ ++ G++G ++G++ Q++ S+
Sbjct: 122 IEEIKSTAESSMAQIEQKLSTEVAVWETLGDLFPAFGMIGTLIGLIQMLQNL----SDPS 177
Query: 170 VSIPGIIESLISILLGLCVS 189
PG+ ++I+ L G ++
Sbjct: 178 ALGPGMAVAMITTLYGAILA 197
>gi|90021804|ref|YP_527631.1| flagellar motor protein [Saccharophagus degradans 2-40]
gi|89951404|gb|ABD81419.1| MotA/TolQ/ExbB proton channel [Saccharophagus degradans 2-40]
Length = 246
Score = 40.6 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 22/117 (18%), Positives = 46/117 (39%), Gaps = 5/117 (4%)
Query: 73 CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKL 132
+ + +GL I + K D I +M+ + + + +
Sbjct: 85 AMAARKEGLLGLENIAEKEKDSFAK-KGLQLLVDGSETDVIRHVMETDLIVAEQRDHDAV 143
Query: 133 SFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVS 189
F SM +GI+GAV+G++ Q++A + PGI + ++ + G+ +
Sbjct: 144 QFYESMGGYAPTIGIIGAVMGLIHVMQNLA----DPAELGPGIAIAFVATIYGVAFA 196
>gi|294139894|ref|YP_003555872.1| chemotaxis pomA protein [Shewanella violacea DSS12]
gi|293326363|dbj|BAJ01094.1| chemotaxis pomA protein [Shewanella violacea DSS12]
Length = 255
Score = 40.6 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 37/85 (43%), Gaps = 8/85 (9%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
D + ++ IA E +S ++ +G++G ++G++G ++ +
Sbjct: 119 DVVRDALEKDIALTEERHKMGISIFTAIGDVAPAMGMIGTLVGLVGMLSNM----DDPKS 174
Query: 171 SIPGIIESLISILLGL----CVSIP 191
P + +L++ L G V+IP
Sbjct: 175 IGPAMAVALLTTLYGAMIANMVAIP 199
>gi|89094433|ref|ZP_01167373.1| flagellar motor protein [Oceanospirillum sp. MED92]
gi|89081325|gb|EAR60557.1| flagellar motor protein [Oceanospirillum sp. MED92]
Length = 246
Score = 40.6 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 23/125 (18%), Positives = 50/125 (40%), Gaps = 6/125 (4%)
Query: 67 QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQ--DRIDRMMDVAIARE 124
S++ + + GL A+ A E G + + D I ++V +
Sbjct: 76 GSIDRIVQWCVVARRKGLLALEKEAEKESDPFVKAGLLLLVDGKGADVIRGTLEVELITA 135
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILL 184
+ + + SM +GI+GAVLG++ ++ S+ GI + ++ +
Sbjct: 136 EQRDLQGAKVIESMGGYAPTLGIIGAVLGLIHVMSNL----SDPDSLGAGIATAFVATIY 191
Query: 185 GLCVS 189
G+ ++
Sbjct: 192 GIGLA 196
>gi|45658759|ref|YP_002845.1| chemotaxis motility protein A [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|45602003|gb|AAS71482.1| chemotaxis motility protein A [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
Length = 252
Score = 40.6 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 13/77 (16%), Positives = 33/77 (42%), Gaps = 3/77 (3%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI 172
++ ++ + ++ T L + VGI+G V+G++G +++ +
Sbjct: 129 VEEILFESAMAMEDKETNSAKILETAGGFSPTVGIIGTVMGLVGVLENL---GAGTKALG 185
Query: 173 PGIIESLISILLGLCVS 189
GI + I+ G+ +
Sbjct: 186 EGIATAFIATFYGIAFA 202
>gi|308275307|emb|CBX31903.1| hypothetical protein N47_O13220 [uncultured Desulfobacterium sp.]
Length = 212
Score = 40.6 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 23/145 (15%), Positives = 52/145 (35%), Gaps = 3/145 (2%)
Query: 76 LKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFL 135
++ ++ + F S++S K S I D + ++ + + + + L L
Sbjct: 56 AQDFPDLLIRGKFSSSVSHKVKLFIGNLNSIISDGDDTEVAIENMLRQNAHMMWKSLDRL 115
Query: 136 GSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIA 195
M G +G+LG ++ M ++ + ++ + + + GL V +
Sbjct: 116 AIMVRVGPSLGLLGTLIPMSTGLAALG--QGDMTRLSADMVIAFTTTVTGLAVGTVAFFF 173
Query: 196 YNKFIEDSKKFAMQMEGFANEFSAI 220
++ ME A E I
Sbjct: 174 ATIRRRWIEEDIRNME-LAAEILTI 197
>gi|255017133|ref|ZP_05289259.1| flagellar motor protein MotA [Listeria monocytogenes FSL F2-515]
Length = 246
Score = 40.6 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 14/117 (11%), Positives = 36/117 (30%), Gaps = 4/117 (3%)
Query: 73 CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKL 132
++ + L + K + + + +++ +A E
Sbjct: 86 ADEIRRSGVLALEDSVDEIEDPFMKRGMRLVVDGQSSPEFLRDVLEEEVASMEERHAAYA 145
Query: 133 SFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVS 189
S + +G+LGA +G++ + SN I + + + G+
Sbjct: 146 KIFASAGAYAPTLGVLGAAMGLIHAMGEM----SNPDKLSEAIAAAFVCTIFGIFTG 198
>gi|117921339|ref|YP_870531.1| flagellar motor protein PomA [Shewanella sp. ANA-3]
gi|117613671|gb|ABK49125.1| MotA/TolQ/ExbB proton channel [Shewanella sp. ANA-3]
Length = 255
Score = 40.6 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 13/79 (16%), Positives = 35/79 (44%), Gaps = 4/79 (5%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ + ++ IA E ++ + G +G++G ++G++ ++ S+
Sbjct: 119 EVVRAALEKDIALTEERHRNGIAIFRAFGDVGPAMGMIGTLVGLVAMLSNM----SDPKS 174
Query: 171 SIPGIIESLISILLGLCVS 189
P + +L++ L G V+
Sbjct: 175 IGPSMAVALLTTLYGAVVA 193
>gi|83859896|ref|ZP_00953416.1| flagellar motor protein [Oceanicaulis alexandrii HTCC2633]
gi|83852255|gb|EAP90109.1| flagellar motor protein [Oceanicaulis alexandrii HTCC2633]
Length = 288
Score = 40.6 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 26/120 (21%), Positives = 46/120 (38%), Gaps = 6/120 (5%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+++ M+ I + E L SM+ A +GI+ AVLG++ +I S V
Sbjct: 143 HQVEDAMEKQIEKHHHEAATPAHALQSMADALPALGIVAAVLGIIKTMGAI---DSPPTV 199
Query: 171 SIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
I +L+ LG+ ++ F + + F A+L GN +
Sbjct: 200 LGAKIGSALVGTFLGVFLAYGLV---GPFAARLNEIYEEEGAFYKIIQAVLVAHLHGNAA 256
>gi|15639712|ref|NP_219162.1| flagellar motor rotation protein (motA) [Treponema pallidum subsp.
pallidum str. Nichols]
gi|189025950|ref|YP_001933722.1| flagellar motor rotation protein [Treponema pallidum subsp.
pallidum SS14]
gi|3024158|sp|O07886|MOTA_TREPA RecName: Full=Motility protein A; AltName: Full=Chemotaxis protein
MotA
gi|2196895|gb|AAB61253.1| MotA [Treponema pallidum]
gi|3323026|gb|AAC65690.1| flagellar motor rotation protein (motA) [Treponema pallidum subsp.
pallidum str. Nichols]
gi|189018525|gb|ACD71143.1| flagellar motor rotation protein [Treponema pallidum subsp.
pallidum SS14]
gi|291060089|gb|ADD72824.1| chemotaxis protein MotA [Treponema pallidum subsp. pallidum str.
Chicago]
Length = 259
Score = 40.6 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 24/136 (17%), Positives = 49/136 (36%), Gaps = 7/136 (5%)
Query: 56 FREFEQL-FWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDR-- 112
R F F + ++ + + GL A+ G R+ + D
Sbjct: 63 ARVFHAADFHEREIVQRLYALAEKSRRTGLLALEEEIQDFDDDFVRTGLRNVVDGVDGDA 122
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI 172
I +M+ + + +S L S ++ G+LG V+G++G ++ +
Sbjct: 123 IKALMESELTHMEDRHNTWISLLNSWAALAPGYGMLGTVMGLIGMLATL----EDKSSLG 178
Query: 173 PGIIESLISILLGLCV 188
+ +LI+ G V
Sbjct: 179 SNMATALITTFYGSLV 194
>gi|83590575|ref|YP_430584.1| MotA/TolQ/ExbB proton channel [Moorella thermoacetica ATCC 39073]
gi|83573489|gb|ABC20041.1| MotA/TolQ/ExbB proton channel [Moorella thermoacetica ATCC 39073]
Length = 253
Score = 40.6 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 15/95 (15%), Positives = 37/95 (38%), Gaps = 1/95 (1%)
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+L + ++ + + L + + A I ++ I R+M+ I R ++
Sbjct: 80 TLVDLAETARREGLLALESRAQQFSDPLLRHGLSFAVDGIDPEE-IRRIMENEIMRRQQD 138
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA 162
+ +GI+G V+G++ +I+
Sbjct: 139 YKTGAGIFETAGGYAPTMGIIGTVIGLVHVLSNIS 173
>gi|315649792|ref|ZP_07902875.1| MotA/TolQ/ExbB proton channel [Paenibacillus vortex V453]
gi|315274766|gb|EFU38147.1| MotA/TolQ/ExbB proton channel [Paenibacillus vortex V453]
Length = 264
Score = 40.6 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 18/111 (16%), Positives = 42/111 (37%), Gaps = 5/111 (4%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ + +++++ I ++ S +GI+G V+G++ S+ +
Sbjct: 122 EMVRQILELDINAAEQKHEGYAKIFESAGGYAPTMGIIGTVMGLIHVLGSL----QDPTN 177
Query: 171 SIPGIIESLISILLGLCVS-IPSSIAYNKFIEDSKKFAMQMEGFANEFSAI 220
P I + + L G+ + I +K S++ ME A+
Sbjct: 178 LGPSIAVAFTATLYGVASANIIFLPIASKIKARSEEEIANMELLLEGIMAV 228
>gi|295696766|ref|YP_003590004.1| MotA/TolQ/ExbB proton channel [Bacillus tusciae DSM 2912]
gi|295412368|gb|ADG06860.1| MotA/TolQ/ExbB proton channel [Bacillus tusciae DSM 2912]
Length = 264
Score = 40.6 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 12/79 (15%), Positives = 33/79 (41%), Gaps = 4/79 (5%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ + M++ + + ++ + +GI+G V+G++ +++ S
Sbjct: 123 ELVRTMLETDVQFLENRHRQGVAIFEAAGGYAPTMGIIGTVMGLVHVLSNLSDIQS---- 178
Query: 171 SIPGIIESLISILLGLCVS 189
P I + I+ L G+ +
Sbjct: 179 LGPLIATAFIATLYGVASA 197
>gi|188586028|ref|YP_001917573.1| MotA/TolQ/ExbB proton channel [Natranaerobius thermophilus
JW/NM-WN-LF]
gi|179350715|gb|ACB84985.1| MotA/TolQ/ExbB proton channel [Natranaerobius thermophilus
JW/NM-WN-LF]
Length = 266
Score = 40.6 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 16/125 (12%), Positives = 47/125 (37%), Gaps = 6/125 (4%)
Query: 67 QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDR--IDRMMDVAIARE 124
+++ + + GL A+ KG + + D + +++ ++ +
Sbjct: 75 ETINLLVNLAEKARREGLLALEDDVEEMDDDFLKKGVQLVVDGTDPELVRSILETELSFQ 134
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILL 184
E + +M + G+ G ++G++ + + PG+ +L++ L
Sbjct: 135 EERHKIGQNIFRTMGTFSPAFGMSGTLIGLVSMLDDL----DDPDAIGPGMALALLTTLY 190
Query: 185 GLCVS 189
G+ +
Sbjct: 191 GVVAA 195
>gi|158422268|ref|YP_001523560.1| flagellar motor protein [Azorhizobium caulinodans ORS 571]
gi|158329157|dbj|BAF86642.1| flagellar motor protein [Azorhizobium caulinodans ORS 571]
Length = 296
Score = 40.6 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 22/95 (23%), Positives = 46/95 (48%), Gaps = 5/95 (5%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI 172
I+ +M+ I+ + T+ + LG+++ A +GI AVLG++ +I + +
Sbjct: 143 IEGLMEQEISTIKKHKTKPAAALGTVAEALPALGICAAVLGIVKAMGAI---DQSPEILG 199
Query: 173 PGIIESLISILLGLCV--SIPSSIAYNKFIEDSKK 205
I +LI +G+ +I S +A+ + K+
Sbjct: 200 HYIGSALIGTFVGIYSSYAIISPLAHKIKVTREKQ 234
>gi|160874172|ref|YP_001553488.1| MotA/TolQ/ExbB proton channel [Shewanella baltica OS195]
gi|160859694|gb|ABX48228.1| MotA/TolQ/ExbB proton channel [Shewanella baltica OS195]
gi|315266404|gb|ADT93257.1| MotA/TolQ/ExbB proton channel [Shewanella baltica OS678]
Length = 249
Score = 40.6 bits (94), Expect = 0.20, Method: Composition-based stats.
Identities = 31/203 (15%), Positives = 78/203 (38%), Gaps = 23/203 (11%)
Query: 6 LAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS 65
+ I D S Q+G+ L + + L+ + +++S F+ ++ W
Sbjct: 1 MPITDFSTLQ--TQLGVLT----WPLLLCAFLALMICLERSALFLHQTLLSIWPKKQAW- 53
Query: 66 GQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRI-------DRMMD 118
SL+ ++ + +++ D AR + ++ + ++
Sbjct: 54 -------VMSLRQSSSMATTENVSALLTQTSAQQDLLARGATLLLKQVHQPKVLREELLS 106
Query: 119 VAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYS--NNVVSIPGII 176
+ + ++ ++ L L + L+G+LG VLG++ F + G+
Sbjct: 107 LWLNKQQRDLQAGLKVLQVIGIISPLLGLLGTVLGLIDMFAQLGQSQGPVTPAQLSAGLG 166
Query: 177 ESLISILLGLCVSIPSSIAYNKF 199
++ + GL +++P+ A + F
Sbjct: 167 LAMNTTAAGLIIAVPAITAAHLF 189
>gi|39935078|ref|NP_947354.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris CGA009]
gi|192290611|ref|YP_001991216.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris TIE-1]
gi|39648929|emb|CAE27450.1| possible chemotaxis protein motA [Rhodopseudomonas palustris
CGA009]
gi|192284360|gb|ACF00741.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris TIE-1]
Length = 257
Score = 40.6 bits (94), Expect = 0.20, Method: Composition-based stats.
Identities = 19/123 (15%), Positives = 46/123 (37%), Gaps = 7/123 (5%)
Query: 67 QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
L ++ + + +GL + A + + I + I ++ L
Sbjct: 79 DELASIAEIARKSGPVGLEKV--EAEDPFLAKGIRYVADGYDI-EFIRDNLERDRDNFLM 135
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGL 186
+ E ++ G++G ++GM+ F ++ S+ P + +L++ L G
Sbjct: 136 HLDEGSKIYRAIGDCAPAFGMIGTLIGMVQMFSNM----SDPSKLGPFMATALLATLYGA 191
Query: 187 CVS 189
V+
Sbjct: 192 LVA 194
>gi|288573019|ref|ZP_06391376.1| MotA/TolQ/ExbB proton channel [Dethiosulfovibrio peptidovorans DSM
11002]
gi|288568760|gb|EFC90317.1| MotA/TolQ/ExbB proton channel [Dethiosulfovibrio peptidovorans DSM
11002]
Length = 264
Score = 40.6 bits (94), Expect = 0.20, Method: Composition-based stats.
Identities = 18/135 (13%), Positives = 50/135 (37%), Gaps = 10/135 (7%)
Query: 61 QLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQ------DRID 114
F L ++ +++ + ++ ++ + D+ I + + +
Sbjct: 65 AFFSQTPDLVSLVQTIVSFAEKARREGLLALEADASELDDEFLAKSIQLVVDGTDPELVK 124
Query: 115 RMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG 174
++D I+ E +M G+LG ++G++ +++ S PG
Sbjct: 125 AILDTEISVLEERHASNKGMFDTMGELFPAFGMLGTLIGLIAMLRNLDDPGS----LGPG 180
Query: 175 IIESLISILLGLCVS 189
+ +LI+ G ++
Sbjct: 181 MAVALITTFYGSFMA 195
>gi|167463461|ref|ZP_02328550.1| MotA [Paenibacillus larvae subsp. larvae BRL-230010]
Length = 265
Score = 40.6 bits (94), Expect = 0.20, Method: Composition-based stats.
Identities = 22/148 (14%), Positives = 53/148 (35%), Gaps = 7/148 (4%)
Query: 67 QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDR--IDRMMDVAIARE 124
++++ + G+ A+ A + G + D +++++ +
Sbjct: 76 ETIDDIVDMATIARREGVLALEQRAQEHPNEFLRDGLMMVVDGTDPELTRQILELEMDSI 135
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILL 184
++ S +GI+G V+G++ ++ + P I + + L
Sbjct: 136 EQQNEGMTKMFESAGGYSPTMGIIGTVMGLIHVLGNL----EDPSALGPAIAVAFTATLY 191
Query: 185 GLCVS-IPSSIAYNKFIEDSKKFAMQME 211
G+ + + NK SK+ QME
Sbjct: 192 GVMAANVIYLPIGNKIRIRSKEQISQME 219
>gi|194221476|ref|XP_001498336.2| PREDICTED: similar to Golgi reassembly stacking protein 1, 65kDa
[Equus caballus]
Length = 351
Score = 40.6 bits (94), Expect = 0.20, Method: Composition-based stats.
Identities = 19/127 (14%), Positives = 37/127 (29%), Gaps = 20/127 (15%)
Query: 23 AVKCIITL---LFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNH 79
V + L S+ + +F Q W L +
Sbjct: 85 VVPSNMWGGQGLLGASV--------RFCSFRRASEHVWHVLQGRW--------FVILSSG 128
Query: 80 HNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMS 139
AA F++ + + + C + S + R M+ + + +L LG +S
Sbjct: 129 RGTLFAA-FLAGLRPYTRLCGHSSPSSPDMGSRQSDYMEALLQAPDSSMERRLPELGLLS 187
Query: 140 SAGLLVG 146
+G
Sbjct: 188 HGAPDLG 194
>gi|307824497|ref|ZP_07654722.1| MotA/TolQ/ExbB proton channel [Methylobacter tundripaludum SV96]
gi|307734481|gb|EFO05333.1| MotA/TolQ/ExbB proton channel [Methylobacter tundripaludum SV96]
Length = 251
Score = 40.2 bits (93), Expect = 0.21, Method: Composition-based stats.
Identities = 27/128 (21%), Positives = 49/128 (38%), Gaps = 9/128 (7%)
Query: 103 ARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA 162
P I+D ++ MD + L+ +M +GILGAV+G++ Q++
Sbjct: 118 GNDPDAIRDILEMDMDAKESMGLQAA----GVYEAMGGYAPTIGILGAVMGLIHVMQNL- 172
Query: 163 GYYSNNVVSIPGIIESLISILLGLCVSIPSSI-AYNKFIEDSKKFAMQMEGFANEFSAIL 221
+N + GI + ++ + G+ + + NK E A +I
Sbjct: 173 ---TNPELLGQGIATAFVATIYGVGSANLVFLPVANKLKAHVLALTQAREMLAEGIISIA 229
Query: 222 SRQTEGNI 229
Q NI
Sbjct: 230 EGQNPRNI 237
>gi|189423112|ref|YP_001950289.1| MotA/TolQ/ExbB proton channel [Geobacter lovleyi SZ]
gi|189419371|gb|ACD93769.1| MotA/TolQ/ExbB proton channel [Geobacter lovleyi SZ]
Length = 249
Score = 40.2 bits (93), Expect = 0.21, Method: Composition-based stats.
Identities = 14/77 (18%), Positives = 32/77 (41%), Gaps = 4/77 (5%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI 172
+ ++ I + + F + +GI+GAVLG++ ++ S+
Sbjct: 124 LRETLEAEIMAYEDHKKHSVEFFEAAGGYSPTIGIIGAVLGLIHVMGNL----SDTSKLG 179
Query: 173 PGIIESLISILLGLCVS 189
GI + ++ + GL +
Sbjct: 180 AGIAAAFVATIYGLMTA 196
>gi|302387786|ref|YP_003823608.1| MotA/TolQ/ExbB proton channel [Clostridium saccharolyticum WM1]
gi|302198414|gb|ADL05985.1| MotA/TolQ/ExbB proton channel [Clostridium saccharolyticum WM1]
Length = 271
Score = 40.2 bits (93), Expect = 0.21, Method: Composition-based stats.
Identities = 13/79 (16%), Positives = 35/79 (44%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
++I M++ +A E + +S +S G++G ++G++ +S+ +
Sbjct: 120 EKIREMLESEVAAMSERHDQDVSMYEKGTSVAPAFGMIGTLVGLVNMLKSMNMDSGSANS 179
Query: 171 SIPGIIESLISILLGLCVS 189
+ +LI+ G ++
Sbjct: 180 LGADMSVALITTFYGCVLA 198
>gi|326796444|ref|YP_004314264.1| MotA/TolQ/ExbB proton channel [Marinomonas mediterranea MMB-1]
gi|326547208|gb|ADZ92428.1| MotA/TolQ/ExbB proton channel [Marinomonas mediterranea MMB-1]
Length = 245
Score = 40.2 bits (93), Expect = 0.21, Method: Composition-based stats.
Identities = 17/75 (22%), Positives = 33/75 (44%), Gaps = 4/75 (5%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
D + + R ++ +SFL S+ +GI+G+VLG++ ++ +
Sbjct: 122 DMLYERLHDEAIRIRDKRQSSISFLESVGGYAPTLGIMGSVLGLIQAMANL----DSPEA 177
Query: 171 SIPGIIESLISILLG 185
GI + +S L G
Sbjct: 178 LGHGIAVAFVSTLYG 192
>gi|312795137|ref|YP_004028059.1| TolQ protein [Burkholderia rhizoxinica HKI 454]
gi|312166912|emb|CBW73915.1| TolQ protein [Burkholderia rhizoxinica HKI 454]
Length = 62
Score = 40.2 bits (93), Expect = 0.22, Method: Composition-based stats.
Identities = 13/29 (44%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Query: 168 NVVSIPG-IIESLISILLGLCVSIPSSIA 195
+ V+ PG + E+LI GL V+IP++IA
Sbjct: 34 DNVAGPGPVGEALIMTAFGLVVAIPAAIA 62
>gi|300855152|ref|YP_003780136.1| putative flagellar motor protein MotA [Clostridium ljungdahlii DSM
13528]
gi|300435267|gb|ADK15034.1| predicted flagellar motor protein MotA [Clostridium ljungdahlii DSM
13528]
Length = 263
Score = 40.2 bits (93), Expect = 0.22, Method: Composition-based stats.
Identities = 16/99 (16%), Positives = 41/99 (41%), Gaps = 7/99 (7%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
I ++++ I E S + + + +G+LGAV+G++G ++ +
Sbjct: 123 QYIIEVLELEIENREERHRAGASTMTTAGGSAPTLGVLGAVIGLIGALGNL----DDTEK 178
Query: 171 SIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQ 209
I + ++ L G+ + + + F K+ + +
Sbjct: 179 LGHMIAAAFVATLYGIFLG---YVICHPFASRLKRKSQE 214
>gi|197105668|ref|YP_002131045.1| hypothetical protein PHZ_c2205 [Phenylobacterium zucineum HLK1]
gi|196479088|gb|ACG78616.1| hypothetical protein PHZ_c2205 [Phenylobacterium zucineum HLK1]
Length = 162
Score = 40.2 bits (93), Expect = 0.22, Method: Composition-based stats.
Identities = 21/141 (14%), Positives = 48/141 (34%), Gaps = 2/141 (1%)
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEIT 129
+ + + +F A E K + + + +
Sbjct: 22 QDGYTVVPAAERLTFGDVFADASVEVKTAMVLLIAGAAASLIIWAMSLRKVGQADAPALA 81
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN--VVSIPGIIESLISILLGLC 187
+ +L + S G+++G+L A ++ F +A V PG E+ ++++LGL
Sbjct: 82 GAMGWLRIIRSGGVMLGVLTASFILLWSFIGVANVRPAPSLTVLAPGFAEACLAVMLGLL 141
Query: 188 VSIPSSIAYNKFIEDSKKFAM 208
S + + ++ A
Sbjct: 142 ASTVAVVCERHLEARIRRAAA 162
>gi|118588412|ref|ZP_01545821.1| MotA/TolQ/ExbB proton channel [Stappia aggregata IAM 12614]
gi|118439118|gb|EAV45750.1| MotA/TolQ/ExbB proton channel [Stappia aggregata IAM 12614]
Length = 255
Score = 40.2 bits (93), Expect = 0.22, Method: Composition-based stats.
Identities = 12/79 (15%), Positives = 34/79 (43%), Gaps = 4/79 (5%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ I M+ +L ++E ++ + G++G ++G++ ++ +
Sbjct: 120 EFIRESMERERDLQLSRLSEGKRVFKALGDSAPAFGMIGTLVGLVQMLANM----DDPAA 175
Query: 171 SIPGIIESLISILLGLCVS 189
P + +L++ L G +S
Sbjct: 176 IGPSMAVALLTTLYGALIS 194
>gi|89073142|ref|ZP_01159681.1| flagellar motor protein [Photobacterium sp. SKA34]
gi|89051095|gb|EAR56552.1| flagellar motor protein [Photobacterium sp. SKA34]
Length = 253
Score = 40.2 bits (93), Expect = 0.22, Method: Composition-based stats.
Identities = 14/85 (16%), Positives = 34/85 (40%), Gaps = 8/85 (9%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
D + + I+ E + + S +G++G ++G++ ++ +
Sbjct: 119 DVVRGTLQKDISLTNERHQQGVGIFSSFGDVAPAMGMIGTLIGLVAMLSNM----DDPKA 174
Query: 171 SIPGIIESLISILLGL----CVSIP 191
P + +L++ L G V+IP
Sbjct: 175 IGPAMAVALLTTLYGSMLANMVAIP 199
>gi|91201945|emb|CAJ75005.1| strongly similar to H+-driven flagellar motor component MotA
[Candidatus Kuenenia stuttgartiensis]
Length = 262
Score = 40.2 bits (93), Expect = 0.22, Method: Composition-based stats.
Identities = 15/100 (15%), Positives = 39/100 (39%), Gaps = 7/100 (7%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
D + ++ I + + T L G++G +LG++ +++ +
Sbjct: 123 SDALRDILGTEIDKIRQRHTSGKGILDFAGMVAPAYGMIGTLLGLVNMLKNL----DDPS 178
Query: 170 VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQ 209
G+ +LI+ L G+ I S++ + + + +
Sbjct: 179 KIGGGMAVALITTLYGV---ILSNLIFIPLGGRLETLSSK 215
>gi|114565808|ref|YP_752962.1| hypothetical protein Swol_0239 [Syntrophomonas wolfei subsp. wolfei
str. Goettingen]
gi|114336743|gb|ABI67591.1| conserved hypothetical protein [Syntrophomonas wolfei subsp. wolfei
str. Goettingen]
Length = 263
Score = 40.2 bits (93), Expect = 0.23, Method: Composition-based stats.
Identities = 16/123 (13%), Positives = 41/123 (33%), Gaps = 5/123 (4%)
Query: 67 QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
++L + + L + +E+ S + M+++ I +
Sbjct: 79 ETLVETADKARREGLLSLESQLGEIDNEF-LSRGLQLVIDGTDPELTRSMLEMEIEAHEK 137
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGL 186
+ + +GI+G V+G++ +IA I + ++ L G+
Sbjct: 138 SQKVGVDIFMTAGGFAPTMGIIGTVMGLIHVLSNIA----EPDKLAGAIAVAFLATLYGV 193
Query: 187 CVS 189
+
Sbjct: 194 ASA 196
>gi|94969960|ref|YP_592008.1| MotA/TolQ/ExbB proton channel [Candidatus Koribacter versatilis
Ellin345]
gi|94552010|gb|ABF41934.1| MotA/TolQ/ExbB proton channel [Candidatus Koribacter versatilis
Ellin345]
Length = 255
Score = 40.2 bits (93), Expect = 0.24, Method: Composition-based stats.
Identities = 23/111 (20%), Positives = 46/111 (41%), Gaps = 5/111 (4%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI 172
+ +MM++ + +E E+ + +GI+GAVLG++ Q + N
Sbjct: 125 LRKMMELELDQEAEKDERTPQVFEAAGGYSPTIGIIGAVLGLIQVMQHL----QNIDEVG 180
Query: 173 PGIIESLISILLGLCVS-IPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
GI + ++ + G+ + I A K ++ +Q E A+L
Sbjct: 181 RGIAVAFVATIYGVAAANIFFLPAAGKLRIRVREAQLQREMAVEGVIALLE 231
>gi|113971063|ref|YP_734856.1| flagellar motor protein PomA [Shewanella sp. MR-4]
gi|114048293|ref|YP_738843.1| flagellar motor protein PomA [Shewanella sp. MR-7]
gi|113885747|gb|ABI39799.1| MotA/TolQ/ExbB proton channel [Shewanella sp. MR-4]
gi|113889735|gb|ABI43786.1| MotA/TolQ/ExbB proton channel [Shewanella sp. MR-7]
Length = 255
Score = 40.2 bits (93), Expect = 0.24, Method: Composition-based stats.
Identities = 13/79 (16%), Positives = 35/79 (44%), Gaps = 4/79 (5%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ + ++ IA E ++ + G +G++G ++G++ ++ S+
Sbjct: 119 EVVRAALEKDIALTEERHRNGIAIFRAFGDVGPAMGMIGTLVGLVAMLSNM----SDPKS 174
Query: 171 SIPGIIESLISILLGLCVS 189
P + +L++ L G V+
Sbjct: 175 IGPSMAVALLTTLYGAVVA 193
>gi|170741246|ref|YP_001769901.1| MotA/TolQ/ExbB proton channel [Methylobacterium sp. 4-46]
gi|168195520|gb|ACA17467.1| MotA/TolQ/ExbB proton channel [Methylobacterium sp. 4-46]
Length = 257
Score = 40.2 bits (93), Expect = 0.24, Method: Composition-based stats.
Identities = 16/80 (20%), Positives = 33/80 (41%), Gaps = 4/80 (5%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
+D I M+ L + E + G++G +LGM+ F ++ S+
Sbjct: 120 RDFIRDTMERDRDNFLMHLEEGSKVYRAFGDCAPAWGMIGTILGMVSMFANM----SDPS 175
Query: 170 VSIPGIIESLISILLGLCVS 189
P + +L++ L G ++
Sbjct: 176 KLGPAMATALLATLYGALIA 195
>gi|89056675|ref|YP_512126.1| flagellar motor protein MotA [Jannaschia sp. CCS1]
gi|88866224|gb|ABD57101.1| chemotaxis protein MotA [Jannaschia sp. CCS1]
Length = 288
Score = 40.2 bits (93), Expect = 0.24, Method: Composition-based stats.
Identities = 22/145 (15%), Positives = 54/145 (37%), Gaps = 12/145 (8%)
Query: 46 SVNFITLRRQFR-EFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGAR 104
I L+RQ E+ + + + I + + + +S
Sbjct: 84 LYELIRLQRQNAVAVEEHIEN----PEGSEIFGRYPKILKDHEAVELICDTMRSAAMNYN 139
Query: 105 SPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGY 164
P +++ +D+ ++ + ++ + +++ +GI+ AVLG++ SI
Sbjct: 140 DPHQVEEVLDKRLEQNVHHQMH----GSHAMQTVADGLPALGIVAAVLGVIKTMASI--- 192
Query: 165 YSNNVVSIPGIIESLISILLGLCVS 189
V I +L+ LG+ ++
Sbjct: 193 DQPPEVLGGLIGGALVGTFLGVFLA 217
>gi|74055056|gb|AAZ95861.1| PomA [Aeromonas hydrophila]
Length = 245
Score = 40.2 bits (93), Expect = 0.24, Method: Composition-based stats.
Identities = 23/153 (15%), Positives = 50/153 (32%), Gaps = 8/153 (5%)
Query: 61 QLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVA 120
L + L+ + + L E+ + + I D I +++
Sbjct: 70 DLVNQAERLQAWAVFARQQGLLALENQADQESDEFTRQGLTMIVDGVSIDD-IRMLLEAD 128
Query: 121 IARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLI 180
I E E +M +GI+GAV+G++ + + GI + +
Sbjct: 129 IDIEQERNEHSARVFEAMGGYSPTIGIIGAVMGLIQAMFHL----EDPAALGAGIAVAFV 184
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGF 213
+ + G+ + ++ Y + F F
Sbjct: 185 ATIYGVGFA---NLFYLPIANRLRAFHYHYALF 214
>gi|331006365|ref|ZP_08329675.1| Flagellar motor rotation protein MotA [gamma proteobacterium
IMCC1989]
gi|330419825|gb|EGG94181.1| Flagellar motor rotation protein MotA [gamma proteobacterium
IMCC1989]
Length = 248
Score = 40.2 bits (93), Expect = 0.25, Method: Composition-based stats.
Identities = 16/84 (19%), Positives = 40/84 (47%), Gaps = 4/84 (4%)
Query: 106 PIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYY 165
G + R+++ + + + + + F SM VGI+GAV+G++ +++
Sbjct: 119 DEGSPQTLRRVLESDLILDEQRDQDAVRFYASMGGYAPTVGIIGAVMGLIYVMRNL---- 174
Query: 166 SNNVVSIPGIIESLISILLGLCVS 189
+ + GI + I+ + G+ ++
Sbjct: 175 DDPSLLGSGIAVAFIATIYGVALA 198
>gi|326792988|ref|YP_004310809.1| MotA/TolQ/ExbB proton channel [Clostridium lentocellum DSM 5427]
gi|326543752|gb|ADZ85611.1| MotA/TolQ/ExbB proton channel [Clostridium lentocellum DSM 5427]
Length = 264
Score = 40.2 bits (93), Expect = 0.26, Method: Composition-based stats.
Identities = 12/63 (19%), Positives = 25/63 (39%), Gaps = 4/63 (6%)
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGL 186
+ S +GI+G V+G++ ++ S+ P I + I+ L G+
Sbjct: 140 RHEAGFAIFESAGGYSPTMGIIGTVMGLVHVLGNL----SDPSTLGPKIAVAFIATLYGV 195
Query: 187 CVS 189
+
Sbjct: 196 GTA 198
>gi|254500652|ref|ZP_05112803.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Labrenzia alexandrii DFL-11]
gi|222436723|gb|EEE43402.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Labrenzia alexandrii DFL-11]
Length = 255
Score = 40.2 bits (93), Expect = 0.26, Method: Composition-based stats.
Identities = 12/79 (15%), Positives = 35/79 (44%), Gaps = 4/79 (5%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ I M+ +L ++E + ++ + G++G ++G++ ++ +
Sbjct: 120 EFIKEAMERERDLQLSRLSEGKRVMKALGDSAPAFGMIGTLVGLVQMLANM----DDPAA 175
Query: 171 SIPGIIESLISILLGLCVS 189
P + +L++ L G +S
Sbjct: 176 IGPSMAVALLTTLYGALIS 194
>gi|226310456|ref|YP_002770350.1| flagellar motor protein MotA [Brevibacillus brevis NBRC 100599]
gi|226093404|dbj|BAH41846.1| chemotaxis MotA protein [Brevibacillus brevis NBRC 100599]
Length = 271
Score = 40.2 bits (93), Expect = 0.26, Method: Composition-based stats.
Identities = 16/95 (16%), Positives = 38/95 (40%), Gaps = 7/95 (7%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
D + +++ I E S +G+LGAV+G++ +++ + +
Sbjct: 123 DFVRDVLNEEIHAIEERHQAGALVFSQAGSYAPTLGVLGAVVGLIAALGNLSDIDALGIS 182
Query: 171 SIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKK 205
I + ++ LLG+ + ++ F K+
Sbjct: 183 ----IAAAFVATLLGIFTG---YVLWHPFATKLKR 210
>gi|261409602|ref|YP_003245843.1| MotA/TolQ/ExbB proton channel [Paenibacillus sp. Y412MC10]
gi|261286065|gb|ACX68036.1| MotA/TolQ/ExbB proton channel [Paenibacillus sp. Y412MC10]
Length = 264
Score = 39.8 bits (92), Expect = 0.26, Method: Composition-based stats.
Identities = 18/111 (16%), Positives = 44/111 (39%), Gaps = 5/111 (4%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ + +++++ I ++ S +GI+G V+G++ S+ +
Sbjct: 122 EMVRQILELDINAAEQKHEGYAKIFESAGGYAPTMGIIGTVMGLIHVLGSL----QDPTG 177
Query: 171 SIPGIIESLISILLGLCVS-IPSSIAYNKFIEDSKKFAMQMEGFANEFSAI 220
P I + + L G+ + I +K S++ ++ME A+
Sbjct: 178 LGPSIAVAFTATLYGVASANIIFLPIASKIKARSEEEIVKMELLLEGIMAV 228
>gi|56695126|ref|YP_165473.1| flagellar motor protein MotA [Ruegeria pomeroyi DSS-3]
gi|56676863|gb|AAV93529.1| chemotaxis protein MotA [Ruegeria pomeroyi DSS-3]
Length = 289
Score = 39.8 bits (92), Expect = 0.26, Method: Composition-based stats.
Identities = 17/93 (18%), Positives = 39/93 (41%), Gaps = 7/93 (7%)
Query: 97 KSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMG 156
+S P +++ +++ M+ + + L +++ +GI+ AVLG++
Sbjct: 132 RSASMNYDDPHQVEEVLEKRMEANLHHAMHSSHA----LQTVADGLPALGIVAAVLGVIK 187
Query: 157 FFQSIAGYYSNNVVSIPGIIESLISILLGLCVS 189
SI V I +L+ LG+ ++
Sbjct: 188 TMGSI---DQPPEVLGRLIGGALVGTFLGVFLA 217
>gi|119472096|ref|ZP_01614327.1| flagellar motor protein PomA [Alteromonadales bacterium TW-7]
gi|119445116|gb|EAW26409.1| flagellar motor protein PomA [Alteromonadales bacterium TW-7]
Length = 238
Score = 39.8 bits (92), Expect = 0.27, Method: Composition-based stats.
Identities = 12/85 (14%), Positives = 33/85 (38%), Gaps = 8/85 (9%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
D + + I+ +++ +G++G ++G++ ++ +
Sbjct: 104 DVVRATLQKDISLTTTRHELGAGLFKALADIAPAMGMIGTLIGLVAMLSNM----DDPKA 159
Query: 171 SIPGIIESLISILLGLC----VSIP 191
P + +L++ L G V+IP
Sbjct: 160 IGPAMAVALLTTLYGAFLANVVAIP 184
>gi|297618037|ref|YP_003703196.1| MotA/TolQ/ExbB proton channel [Syntrophothermus lipocalidus DSM
12680]
gi|297145874|gb|ADI02631.1| MotA/TolQ/ExbB proton channel [Syntrophothermus lipocalidus DSM
12680]
Length = 263
Score = 39.8 bits (92), Expect = 0.27, Method: Composition-based stats.
Identities = 16/127 (12%), Positives = 44/127 (34%), Gaps = 8/127 (6%)
Query: 66 GQSLETVCKSLKNHHNIGL---AAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIA 122
G++++ + + GL +E+ + + + M+++ I
Sbjct: 75 GETIDQLVQVADKARREGLLSLETQLEELENEFMRRALQLVIDGTD-PELTRNMLEMEIE 133
Query: 123 RELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISI 182
+ + + +GI+G V+G++ ++ S I + I+
Sbjct: 134 AFEKRQKLGVDIFNAAGGFAPTMGIIGTVMGLVQVLSNV----SEPDKLGGAIAVAFIAT 189
Query: 183 LLGLCVS 189
L G+ +
Sbjct: 190 LYGIFSA 196
>gi|169831940|ref|YP_001717922.1| MotA/TolQ/ExbB proton channel [Candidatus Desulforudis audaxviator
MP104C]
gi|169638784|gb|ACA60290.1| MotA/TolQ/ExbB proton channel [Candidatus Desulforudis audaxviator
MP104C]
Length = 272
Score = 39.8 bits (92), Expect = 0.27, Method: Composition-based stats.
Identities = 24/177 (13%), Positives = 58/177 (32%), Gaps = 17/177 (9%)
Query: 21 GLAVKCIITLLFI----FSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS--LETVCK 74
L V + ++F SI + + V+ + R R + +E +
Sbjct: 34 SLIVPAAMAVVFGCTLSASIATL-----RKVDISDVFRSLRMLVHHRAKSPTEMIEEIVS 88
Query: 75 SLKNHHNIGLAAI--FMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKL 132
+ GL + ++ + + + + +++ + E
Sbjct: 89 LAEKARREGLLYLENYLEGVDDLFLRKGLQLVIDGAEPEVVKGVLETELYALEERHRVAH 148
Query: 133 SFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVS 189
F + S +GI GA++G++ +I P I + ++ L G+ +
Sbjct: 149 EFFETAGSFAPTMGIAGAIMGLIVALGNI----QEPDKLGPAIASAFVATLYGVVFA 201
>gi|294142331|ref|YP_003558309.1| TonB system transport protein ExbB1 [Shewanella violacea DSS12]
gi|293328800|dbj|BAJ03531.1| TonB system transport protein ExbB1 [Shewanella violacea DSS12]
Length = 245
Score = 39.8 bits (92), Expect = 0.27, Method: Composition-based stats.
Identities = 18/93 (19%), Positives = 39/93 (41%), Gaps = 7/93 (7%)
Query: 114 DRMMDVAI-----ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYS-- 166
+R M I +++ + + L L + L+G+LG VLG++ F +
Sbjct: 92 NRAMREEIVNLWLSKQKQVLRSGLKVLQVIGIITPLLGLLGTVLGLIEMFNQLGASDGPV 151
Query: 167 NNVVSIPGIIESLISILLGLCVSIPSSIAYNKF 199
G+ ++ + GL +++P+ + F
Sbjct: 152 TPSQLASGLGLAMNTTAAGLIIAVPAITMAHLF 184
>gi|331269324|ref|YP_004395816.1| chemotaxis MotA protein [Clostridium botulinum BKT015925]
gi|329125874|gb|AEB75819.1| chemotaxis MotA protein [Clostridium botulinum BKT015925]
Length = 269
Score = 39.8 bits (92), Expect = 0.28, Method: Composition-based stats.
Identities = 11/79 (13%), Positives = 34/79 (43%), Gaps = 4/79 (5%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ I ++++ + + + L + G+LG ++G++ ++ +
Sbjct: 125 ETIREILELEVGEMEKRHKDGADVLKAWGGYAPAFGMLGTLIGLIQMLANL----DDPSN 180
Query: 171 SIPGIIESLISILLGLCVS 189
PG+ ++LI+ G ++
Sbjct: 181 LGPGMGKALITTFYGSLMA 199
>gi|144899935|emb|CAM76799.1| MotA/TolQ/ExbB proton channel [Magnetospirillum gryphiswaldense
MSR-1]
Length = 266
Score = 39.8 bits (92), Expect = 0.28, Method: Composition-based stats.
Identities = 12/54 (22%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
Query: 134 FLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLC 187
L +M+ G++G ++G++ + S+ PG+ +LI+ L G+
Sbjct: 150 ILRNMAGTAPAYGMIGTLIGLI---IMLGQMGSDPAALGPGMAVALITTLYGVL 200
>gi|88812419|ref|ZP_01127669.1| flagellar motor protein [Nitrococcus mobilis Nb-231]
gi|88790426|gb|EAR21543.1| flagellar motor protein [Nitrococcus mobilis Nb-231]
Length = 254
Score = 39.8 bits (92), Expect = 0.28, Method: Composition-based stats.
Identities = 12/86 (13%), Positives = 36/86 (41%), Gaps = 8/86 (9%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
+ + +++ I + + ++ +G++G ++G++ ++A +
Sbjct: 118 SELVKKVLGQEIDLTMARDEQGEQVFRAIGDVAPAMGMIGTLIGLVQMLSNMA----DPK 173
Query: 170 VSIPGIIESLISILLGLC----VSIP 191
P + +L++ L G V+IP
Sbjct: 174 QIGPAMAVALLTTLYGAVLANSVAIP 199
>gi|253681791|ref|ZP_04862588.1| chemotaxis protein PomA [Clostridium botulinum D str. 1873]
gi|253561503|gb|EES90955.1| chemotaxis protein PomA [Clostridium botulinum D str. 1873]
Length = 269
Score = 39.8 bits (92), Expect = 0.28, Method: Composition-based stats.
Identities = 12/79 (15%), Positives = 34/79 (43%), Gaps = 4/79 (5%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ I ++++ I + + L + G+LG ++G++ ++ +
Sbjct: 125 ETIREILELEIGEMEKRHKDGSEVLKAWGGYAPAFGMLGTLIGLIQMLANL----DDPSN 180
Query: 171 SIPGIIESLISILLGLCVS 189
PG+ ++LI+ G ++
Sbjct: 181 LGPGMGKALITTFYGSLMA 199
>gi|315453528|ref|YP_004073798.1| putative flagellar motor proton channel MotA (pseudogene)
[Helicobacter felis ATCC 49179]
gi|315132580|emb|CBY83208.1| putative flagellar motor proton channel MotA (pseudogene)
[Helicobacter felis ATCC 49179]
Length = 256
Score = 39.8 bits (92), Expect = 0.29, Method: Composition-based stats.
Identities = 18/120 (15%), Positives = 44/120 (36%), Gaps = 5/120 (4%)
Query: 67 QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
+++ + + + L + ++ ++ I+ + ++VAI E
Sbjct: 79 KTIVELSTQARKDGVLSLESKVAQIEDDFTRNGFSMIVDGKDIK-SVQDSLEVAIEELEE 137
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGL 186
+ + + G++GAVLG+M Q + N GI + + + G+
Sbjct: 138 HYHGAAHYWITAGESAPTFGLVGAVLGLMLALQKL----DNPQEMALGIAGAFTATVTGI 193
>gi|160939656|ref|ZP_02087004.1| hypothetical protein CLOBOL_04548 [Clostridium bolteae ATCC
BAA-613]
gi|158437447|gb|EDP15211.1| hypothetical protein CLOBOL_04548 [Clostridium bolteae ATCC
BAA-613]
Length = 294
Score = 39.8 bits (92), Expect = 0.29, Method: Composition-based stats.
Identities = 13/80 (16%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
+++ + M+ + + E F +S G++G ++G++ ++ S+
Sbjct: 128 SEKVRKAMETELEQLDERHALDRRFYEKAASFAPAFGMIGTLVGLILMLGNM----SDVD 183
Query: 170 VSIPGIIESLISILLGLCVS 189
G+ +LI+ L G ++
Sbjct: 184 ALAKGMAVALITTLYGSLLA 203
>gi|330721194|gb|EGG99304.1| Flagellar motor rotation protein MotA [gamma proteobacterium
IMCC2047]
Length = 248
Score = 39.8 bits (92), Expect = 0.29, Method: Composition-based stats.
Identities = 20/115 (17%), Positives = 46/115 (40%), Gaps = 5/115 (4%)
Query: 75 SLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSF 134
+ + +GL AI + E+ + I R ++V + + F
Sbjct: 87 TARKEGLLGLEAIVETE-EEYFAQKGLRLLVDGTEPEAIRRALEVDLYLIESRDLKAARF 145
Query: 135 LGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVS 189
M +GI+GAV+G++ +++A + GI + ++ + G+ ++
Sbjct: 146 FECMGGYAPTIGIIGAVMGLIHVMRNLA----DPSELGSGIATAFVATIYGVGLA 196
>gi|269103245|ref|ZP_06155942.1| Flagellar motor rotation protein MotA [Photobacterium damselae
subsp. damselae CIP 102761]
gi|268163143|gb|EEZ41639.1| Flagellar motor rotation protein MotA [Photobacterium damselae
subsp. damselae CIP 102761]
Length = 253
Score = 39.8 bits (92), Expect = 0.29, Method: Composition-based stats.
Identities = 12/79 (15%), Positives = 33/79 (41%), Gaps = 4/79 (5%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
D + + I+ E + + S G +G++G ++G++ ++ +
Sbjct: 119 DVVRATLQKDISLTHERHEQGIGIFTSFGDVGPAMGMIGTLIGLVAMLSNM----DDPKS 174
Query: 171 SIPGIIESLISILLGLCVS 189
P + +L++ L G ++
Sbjct: 175 IGPAMAVALLTTLYGSILA 193
>gi|221635438|ref|YP_002523314.1| chemotaxis protein PomA [Thermomicrobium roseum DSM 5159]
gi|221157783|gb|ACM06901.1| chemotaxis protein PomA [Thermomicrobium roseum DSM 5159]
Length = 267
Score = 39.8 bits (92), Expect = 0.30, Method: Composition-based stats.
Identities = 15/100 (15%), Positives = 39/100 (39%), Gaps = 5/100 (5%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ ++++ + + +M +GI+G V+G++ S+ +
Sbjct: 120 ELTEQILWADVEAMEQRHARGYGIFQTMGGFAPTMGIIGTVMGLVHVLSSL----KDPES 175
Query: 171 SIPGIIESLISILLGLCVS-IPSSIAYNKFIEDSKKFAMQ 209
P I + ++ L G+ + + +NK SK+ +
Sbjct: 176 LGPAIAVAFLATLYGVATANLLWLPLHNKLKLRSKEEVAE 215
>gi|220913722|ref|YP_002489031.1| MotA/TolQ/ExbB proton channel [Arthrobacter chlorophenolicus A6]
gi|219860600|gb|ACL40942.1| MotA/TolQ/ExbB proton channel [Arthrobacter chlorophenolicus A6]
Length = 276
Score = 39.8 bits (92), Expect = 0.30, Method: Composition-based stats.
Identities = 22/125 (17%), Positives = 46/125 (36%), Gaps = 6/125 (4%)
Query: 67 QSLETVCKSLKNHHNIGLAAIFMSA--MSEWKKSCDKGARSPIGIQDRIDRMMDVAIARE 124
S+E + + + GL A+ A + S + D + +M+ I +
Sbjct: 76 DSIELLVGYAEKARSEGLLALEDEAGTAKDPFVSRALQNIADGTDADELRTLMEDEIDTK 135
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILL 184
+ F S+ +GI+G V+ + +++ S P I + ++ L
Sbjct: 136 MRRDRISSKFFASLGGYAPTIGIIGTVVSLTHVLENL----STPDHLGPMIATAFVATLW 191
Query: 185 GLCVS 189
GL +
Sbjct: 192 GLVSA 196
>gi|126668170|ref|ZP_01739131.1| Flagellar motor component [Marinobacter sp. ELB17]
gi|126627319|gb|EAZ97955.1| Flagellar motor component [Marinobacter sp. ELB17]
Length = 257
Score = 39.8 bits (92), Expect = 0.30, Method: Composition-based stats.
Identities = 24/189 (12%), Positives = 59/189 (31%), Gaps = 9/189 (4%)
Query: 6 LAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSV--NFITLRRQFRE--FEQ 61
+A M + I A+ L + L I +++V + K + ++ R F
Sbjct: 10 VAGMLVVILAMLANATLLTFLNLPGLAIVLGGTFAVTLIKFRLSSLMSAIRLASRAAFMD 69
Query: 62 LFWSGQSL-ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVA 120
L V G+ + + ++ +
Sbjct: 70 RVERPDELIREVGALAMVVRKEGILGLENHTTDNVFLEKAINLCVDGHSPELVEEALHHE 129
Query: 121 IARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLI 180
I + E + + +G+LG ++G++ ++ + P + +L+
Sbjct: 130 IQQCSERYEVAERVFRGIGESAPAIGMLGTLVGLVQMLNTL----DDPSSIGPAMAIALL 185
Query: 181 SILLGLCVS 189
+ L G ++
Sbjct: 186 TTLYGAFIA 194
>gi|329928777|ref|ZP_08282626.1| putative chemotaxis protein MotA [Paenibacillus sp. HGF5]
gi|328937558|gb|EGG33976.1| putative chemotaxis protein MotA [Paenibacillus sp. HGF5]
Length = 264
Score = 39.8 bits (92), Expect = 0.30, Method: Composition-based stats.
Identities = 18/111 (16%), Positives = 44/111 (39%), Gaps = 5/111 (4%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ + +++++ I ++ S +GI+G V+G++ S+ +
Sbjct: 122 EMVRQILELDINAAEQKHEGYAKIFESAGGYAPTMGIIGTVMGLIHVLGSL----QDPTG 177
Query: 171 SIPGIIESLISILLGLCVS-IPSSIAYNKFIEDSKKFAMQMEGFANEFSAI 220
P I + + L G+ + I +K S++ ++ME A+
Sbjct: 178 LGPSIAVAFTATLYGVASANIIFLPIASKIKARSEEEIVKMELLLEGIMAV 228
>gi|254517025|ref|ZP_05129083.1| chemotaxis MotA protein [gamma proteobacterium NOR5-3]
gi|219674530|gb|EED30898.1| chemotaxis MotA protein [gamma proteobacterium NOR5-3]
Length = 265
Score = 39.8 bits (92), Expect = 0.30, Method: Composition-based stats.
Identities = 31/167 (18%), Positives = 59/167 (35%), Gaps = 18/167 (10%)
Query: 54 RQFREFEQLF-W--------SGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGAR 104
R FRE + F W L + + GL A+ E KG +
Sbjct: 73 RDFREALRRFSWVLLPPSYDRQAVLAKTIEWSRVARRDGLLALEQRVGKEPDSLTQKGLQ 132
Query: 105 SPIGIQD--RIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA 162
+ + I +MDV I + + +M +GI+GAVLG++ ++
Sbjct: 133 LLVDGLEPEAIRTVMDVEIDNAMAKDARAAKVYDAMGGYSPTIGIIGAVLGLIDVMNNL- 191
Query: 163 GYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQ 209
S+ GI + ++ + G+ + ++ Y + +
Sbjct: 192 ---SDPAQLGAGIAVAFVATIYGVGFA---NLFYLPIANKLRAISGD 232
>gi|328542462|ref|YP_004302571.1| MotA/TolQ/ExbB proton channel [polymorphum gilvum SL003B-26A1]
gi|326412209|gb|ADZ69272.1| MotA/TolQ/ExbB proton channel [Polymorphum gilvum SL003B-26A1]
Length = 246
Score = 39.8 bits (92), Expect = 0.30, Method: Composition-based stats.
Identities = 13/80 (16%), Positives = 33/80 (41%), Gaps = 4/80 (5%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
D I M+ L ++E ++ + G++G ++G++ ++ +
Sbjct: 110 IDFIRESMERERDLTLTRLSEGKRVFKALGDSAPAFGMIGTLVGLVQMLANM----DDPS 165
Query: 170 VSIPGIIESLISILLGLCVS 189
P + +L++ L G +S
Sbjct: 166 AIGPSMAVALLTTLYGALIS 185
>gi|224436414|ref|ZP_03657434.1| flagellar motor protein MotA [Helicobacter cinaedi CCUG 18818]
gi|313142932|ref|ZP_07805125.1| flagellar motor protein MotA [Helicobacter cinaedi CCUG 18818]
gi|313127963|gb|EFR45580.1| flagellar motor protein MotA [Helicobacter cinaedi CCUG 18818]
Length = 256
Score = 39.8 bits (92), Expect = 0.31, Method: Composition-based stats.
Identities = 21/122 (17%), Positives = 42/122 (34%), Gaps = 8/122 (6%)
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
L T+ + G AA S R +++ M+V I E
Sbjct: 83 ELSTLARKDGVLSLEGKAAQIEDDFLRQALSMIIDGRDAHAVRED----MEVQIESLEEY 138
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLC 187
+ + + +G++GAV+G+M Q + + GI + + + G+
Sbjct: 139 YHGSAHYWVTYAETCPTMGLVGAVMGLMLALQLL----DDPKAMAAGIAGAFTATVTGIF 194
Query: 188 VS 189
+
Sbjct: 195 CA 196
>gi|182412225|ref|YP_001817291.1| MotA/TolQ/ExbB proton channel [Opitutus terrae PB90-1]
gi|177839439|gb|ACB73691.1| MotA/TolQ/ExbB proton channel [Opitutus terrae PB90-1]
Length = 287
Score = 39.8 bits (92), Expect = 0.31, Method: Composition-based stats.
Identities = 18/79 (22%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
D+++ +M+ I + EE + L + + +GI+ AVLG++ +IA +
Sbjct: 141 DQLEELMEAEIDAKSEEWDHPVHVLQLVGDSLPGIGIVAAVLGIINTMAAIA---DGPEM 197
Query: 171 SIPGIIESLISILLGLCVS 189
+ +L LLG+ +
Sbjct: 198 VGKKVAAALTGTLLGIFFA 216
>gi|254511948|ref|ZP_05124015.1| chemotaxis protein MotA [Rhodobacteraceae bacterium KLH11]
gi|221535659|gb|EEE38647.1| chemotaxis protein MotA [Rhodobacteraceae bacterium KLH11]
Length = 289
Score = 39.8 bits (92), Expect = 0.31, Method: Composition-based stats.
Identities = 17/93 (18%), Positives = 38/93 (40%), Gaps = 7/93 (7%)
Query: 97 KSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMG 156
+S P +++ +++ M+ + L +++ +GI+ AVLG++
Sbjct: 132 RSAAMNYDDPHQVEEVLEKRMEANFHHAMHSSHA----LQTVADGLPALGIVAAVLGVIK 187
Query: 157 FFQSIAGYYSNNVVSIPGIIESLISILLGLCVS 189
SI V I +L+ LG+ ++
Sbjct: 188 TMGSI---DQPPEVLGKLIGGALVGTFLGVFLA 217
>gi|90022861|ref|YP_528688.1| flagellar motor protein PomA [Saccharophagus degradans 2-40]
gi|89952461|gb|ABD82476.1| MotA/TolQ/ExbB proton channel [Saccharophagus degradans 2-40]
Length = 253
Score = 39.8 bits (92), Expect = 0.32, Method: Composition-based stats.
Identities = 16/121 (13%), Positives = 43/121 (35%), Gaps = 4/121 (3%)
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+E V GL ++ +S D + ++ + +E
Sbjct: 77 IEEVVALADEARKGGLLSLEGKEVSSDFLQRGIQLLVDGHDPDVVKALLSKDKNQAVERH 136
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCV 188
+ SM+ +G++G ++G++ ++ + P + +L++ L G +
Sbjct: 137 NVGATIFASMADMAPAMGMIGTLIGLVAMLANM----DDPKAIGPAMAVALLTTLYGAVI 192
Query: 189 S 189
+
Sbjct: 193 A 193
>gi|107026972|ref|YP_624483.1| MotA/TolQ/ExbB proton channel [Burkholderia cenocepacia AU 1054]
gi|116691832|ref|YP_837365.1| MotA/TolQ/ExbB proton channel [Burkholderia cenocepacia HI2424]
gi|105896346|gb|ABF79510.1| MotA/TolQ/ExbB proton channel [Burkholderia cenocepacia AU 1054]
gi|116649832|gb|ABK10472.1| MotA/TolQ/ExbB proton channel [Burkholderia cenocepacia HI2424]
Length = 254
Score = 39.8 bits (92), Expect = 0.33, Method: Composition-based stats.
Identities = 26/155 (16%), Positives = 50/155 (32%), Gaps = 13/155 (8%)
Query: 38 SWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKK 97
+W+ + RE ++ + L K + ++ +S + + +
Sbjct: 52 TWARFFDAVKQLRLAFVRAREVDRK--NLSDLLEWGDRAKLDGLLAFESMDVSGIHPFAR 109
Query: 98 S---CDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGM 154
S ++D + R +D L + GILG+VLG+
Sbjct: 110 RGLELLANGVSTAVLEDALQRELDAYERSRLAAVRVWQQ----AGGYAPTFGILGSVLGL 165
Query: 155 MGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVS 189
+ I PGI + I+ L GL +
Sbjct: 166 VQVTSHIL----EPAQLGPGIAVAFIATLYGLAFA 196
>gi|212638650|ref|YP_002315170.1| flagellar motor protein MotA [Anoxybacillus flavithermus WK1]
gi|212560130|gb|ACJ33185.1| Flagellar motor protein A [Anoxybacillus flavithermus WK1]
Length = 304
Score = 39.8 bits (92), Expect = 0.33, Method: Composition-based stats.
Identities = 18/96 (18%), Positives = 38/96 (39%), Gaps = 7/96 (7%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
Q+ I +M I E + + +G+LGAV+G++ Q + S+
Sbjct: 160 QEFIRDVMTEEIEAMEERHLANATIFTQAGTYAPTLGVLGAVVGLIAALQDM----SDIE 215
Query: 170 VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKK 205
I + ++ L+G+ + ++ F K+
Sbjct: 216 RLGHAISAAFVATLMGIFTG---YVLWHPFANKLKR 248
>gi|260432133|ref|ZP_05786104.1| lateral flagellar motor protein MotA [Silicibacter lacuscaerulensis
ITI-1157]
gi|260415961|gb|EEX09220.1| lateral flagellar motor protein MotA [Silicibacter lacuscaerulensis
ITI-1157]
Length = 289
Score = 39.8 bits (92), Expect = 0.34, Method: Composition-based stats.
Identities = 17/93 (18%), Positives = 38/93 (40%), Gaps = 7/93 (7%)
Query: 97 KSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMG 156
+S P +++ +++ M+ + L +++ +GI+ AVLG++
Sbjct: 132 RSAAMNYDDPHQVEEVLEKRMEANFHHAMHSSHA----LQTVADGLPALGIVAAVLGVIK 187
Query: 157 FFQSIAGYYSNNVVSIPGIIESLISILLGLCVS 189
SI V I +L+ LG+ ++
Sbjct: 188 TMGSI---DQPPEVLGKLIGGALVGTFLGVFLA 217
>gi|254488786|ref|ZP_05101991.1| chemotaxis MotA protein [Roseobacter sp. GAI101]
gi|214045655|gb|EEB86293.1| chemotaxis MotA protein [Roseobacter sp. GAI101]
Length = 289
Score = 39.8 bits (92), Expect = 0.34, Method: Composition-based stats.
Identities = 17/102 (16%), Positives = 43/102 (42%), Gaps = 7/102 (6%)
Query: 88 FMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGI 147
++ + + +S P +++ +++ M+ + L L +++ +GI
Sbjct: 123 AIAMICDTMRSASMNYDDPHQVEEVLEKRMEANLEHSLHSSHA----LQTIADGLPALGI 178
Query: 148 LGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVS 189
+ AVLG++ SI + I +L+ LG+ ++
Sbjct: 179 VAAVLGVIKTMASI---DQPPEILGKLIGGALVGTFLGVFLA 217
>gi|148254924|ref|YP_001239509.1| putative chemotaxis protein MotA (flagellar motor component)
[Bradyrhizobium sp. BTAi1]
gi|146407097|gb|ABQ35603.1| putative chemotaxis protein MotA (Flagellar motor component)
[Bradyrhizobium sp. BTAi1]
Length = 257
Score = 39.8 bits (92), Expect = 0.34, Method: Composition-based stats.
Identities = 18/123 (14%), Positives = 44/123 (35%), Gaps = 7/123 (5%)
Query: 67 QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
L + + + +GL + E + + + I ++ L
Sbjct: 79 DELARIAEIARKQGPVGLEKV---ETDEPFLAKGIRYVADGYDLEFIRDNLERDRDNFLM 135
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGL 186
+ E ++ G++G ++GM+ F ++ ++ P + +L++ L G
Sbjct: 136 HLDEGSKIYRAIGDCAPAFGMVGTLIGMVQMFANM----TDPSKLGPFMATALLATLYGA 191
Query: 187 CVS 189
VS
Sbjct: 192 LVS 194
>gi|307718608|ref|YP_003874140.1| chemotaxis protein MotA [Spirochaeta thermophila DSM 6192]
gi|306532333|gb|ADN01867.1| chemotaxis protein MotA [Spirochaeta thermophila DSM 6192]
Length = 262
Score = 39.4 bits (91), Expect = 0.35, Method: Composition-based stats.
Identities = 18/124 (14%), Positives = 45/124 (36%), Gaps = 6/124 (4%)
Query: 65 SGQSLETVCKSLKNHHNIGLAAI---FMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
G+ + + + GL A+ E+ + + I + I ++ +
Sbjct: 74 EGRVINDLVAYAERARREGLLALEDNLDEIEDEFMRKGLQLVVDGID-PEIIKTVLYTEL 132
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLIS 181
S G++G ++G++ +++AG ++ + G+ +LI+
Sbjct: 133 NEMQSRHEVGAKIFDDWSKIAPAFGMIGTLIGLIAMLKNLAGGDTSAI--GQGMATALIT 190
Query: 182 ILLG 185
L G
Sbjct: 191 TLYG 194
>gi|38327417|gb|AAR17737.1| motility protein A [Bdellovibrio bacteriovorus]
Length = 250
Score = 39.4 bits (91), Expect = 0.36, Method: Composition-based stats.
Identities = 26/165 (15%), Positives = 54/165 (32%), Gaps = 11/165 (6%)
Query: 49 FITLRRQFREFEQLFWSGQSLETV---CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARS 105
++ FR E S L + + K + + L K +
Sbjct: 60 LQLAKKAFRHEESR--SKVRLNEIVDCARLAKKENILALEPRLNRIEDPLLKGVLRNVVD 117
Query: 106 PIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYY 165
+ I I + + I E EE+ +GI+GAVLG++ ++
Sbjct: 118 GVDITT-IRDIFETQIHTEEEELLGGAKIWTDAGGFAPTIGIIGAVLGLIHVMGNL---- 172
Query: 166 SNNVVSIPGIIESLISILLGLCVSIPSSIAY-NKFIEDSKKFAMQ 209
++ GI + ++ + G+ + + NK + +
Sbjct: 173 TDTSKLGAGIAVAFVATVYGVSSANLLFLPLGNKLKRRVQALTRE 217
>gi|114320553|ref|YP_742236.1| MotA/TolQ/ExbB proton channel [Alkalilimnicola ehrlichii MLHE-1]
gi|114226947|gb|ABI56746.1| MotA/TolQ/ExbB proton channel [Alkalilimnicola ehrlichii MLHE-1]
Length = 267
Score = 39.4 bits (91), Expect = 0.36, Method: Composition-based stats.
Identities = 12/85 (14%), Positives = 35/85 (41%), Gaps = 8/85 (9%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ + +++ + +E ++ A G++G ++G++ + +
Sbjct: 119 ELMHKVLKEDLEMSVERHDVGQRIFRAIGEAAPAFGMIGTLVGLVQMLAHL----DDPAA 174
Query: 171 SIPGIIESLISILLGL----CVSIP 191
PG+ +L++ L G V++P
Sbjct: 175 IGPGMATALLTTLYGAMFAQLVALP 199
>gi|323706055|ref|ZP_08117625.1| MotA/TolQ/ExbB proton channel [Thermoanaerobacterium xylanolyticum
LX-11]
gi|323534669|gb|EGB24450.1| MotA/TolQ/ExbB proton channel [Thermoanaerobacterium xylanolyticum
LX-11]
Length = 272
Score = 39.4 bits (91), Expect = 0.36, Method: Composition-based stats.
Identities = 17/80 (21%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
+ I M+ I E +E+ + S + +GI+G V+G++ ++ S
Sbjct: 125 IELIRTTMENRIYIEDKELKREASIFEAAGGYSPTMGIIGTVMGLVHVLGNL----SEPD 180
Query: 170 VSIPGIIESLISILLGLCVS 189
P I + I+ L G+ ++
Sbjct: 181 KLGPSIAVAFIATLYGVSMA 200
>gi|311067882|ref|YP_003972805.1| flagellar motor protein MotA [Bacillus atrophaeus 1942]
gi|310868399|gb|ADP31874.1| flagellar motor protein MotA [Bacillus atrophaeus 1942]
Length = 271
Score = 39.4 bits (91), Expect = 0.36, Method: Composition-based stats.
Identities = 18/99 (18%), Positives = 37/99 (37%), Gaps = 7/99 (7%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ I +M + E S + +G+LGAV+G++ + N
Sbjct: 123 EFIRDIMTEEVEAMEERHQTGASIFTQAGTYAPTLGVLGAVVGLIAALSHM----DNTDE 178
Query: 171 SIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQ 209
I + ++ LLG+ + ++ F K+ + Q
Sbjct: 179 LGHAISAAFVATLLGIFTG---YVLWHPFANKLKRKSKQ 214
>gi|126173598|ref|YP_001049747.1| flagellar motor protein PomA [Shewanella baltica OS155]
gi|152999878|ref|YP_001365559.1| flagellar motor protein PomA [Shewanella baltica OS185]
gi|160874503|ref|YP_001553819.1| flagellar motor protein PomA [Shewanella baltica OS195]
gi|125996803|gb|ABN60878.1| MotA/TolQ/ExbB proton channel [Shewanella baltica OS155]
gi|151364496|gb|ABS07496.1| MotA/TolQ/ExbB proton channel [Shewanella baltica OS185]
gi|160860025|gb|ABX48559.1| MotA/TolQ/ExbB proton channel [Shewanella baltica OS195]
gi|315266741|gb|ADT93594.1| MotA/TolQ/ExbB proton channel [Shewanella baltica OS678]
Length = 255
Score = 39.4 bits (91), Expect = 0.36, Method: Composition-based stats.
Identities = 13/79 (16%), Positives = 34/79 (43%), Gaps = 4/79 (5%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ + ++ IA E + + G +G++G ++G++ ++ S+
Sbjct: 119 EVVRAALEKDIALTEERHRTGIGIFRAFGDVGPAMGMIGTLVGLVAMLSNM----SDPKS 174
Query: 171 SIPGIIESLISILLGLCVS 189
P + +L++ L G V+
Sbjct: 175 IGPSMAVALLTTLYGAMVA 193
>gi|114563952|ref|YP_751466.1| flagellar motor protein PomA [Shewanella frigidimarina NCIMB 400]
gi|114335245|gb|ABI72627.1| MotA/TolQ/ExbB proton channel [Shewanella frigidimarina NCIMB 400]
Length = 255
Score = 39.4 bits (91), Expect = 0.36, Method: Composition-based stats.
Identities = 15/121 (12%), Positives = 41/121 (33%), Gaps = 4/121 (3%)
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+E G A+ + ++ D + ++ IA E
Sbjct: 77 IEQAVTMADAARKGGFLALEEAVITNTFMQKAVDMLVDGHDGDVVRNALEKDIALTEERH 136
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCV 188
+ +M +G++G ++G++ ++ + P + +L++ L G +
Sbjct: 137 KTGVGIFKAMGDVAPAMGMIGTLVGLVAMLSNM----DDPKSIGPSMAVALLTTLYGAVI 192
Query: 189 S 189
+
Sbjct: 193 A 193
>gi|295110190|emb|CBL24143.1| hypothetical protein [Ruminococcus obeum A2-162]
Length = 543
Score = 39.4 bits (91), Expect = 0.36, Method: Composition-based stats.
Identities = 33/182 (18%), Positives = 63/182 (34%), Gaps = 14/182 (7%)
Query: 49 FITLRRQFREFEQLFWSGQSLETVCK---SLKNHHNIGLAAIFMSAMSE--WKKSCDKGA 103
F + R + L + LE K + L IF A + K D A
Sbjct: 52 FGGMFRMNKLSLALKDAADELEDAFKMPGRVAPDKVASLNGIFHHAYLDGKMKAFTDSIA 111
Query: 104 RSPIGIQDRIDRMMDVAIARELEE--ITEKLSFLGSMSSAGLLVGILGAVLGMMGFF-QS 160
+S GI D + + + + + + + S+ G VG+ V G+ F
Sbjct: 112 KSQEGIVDIEEFLNEDDLDMHVHKRLLEMAPDLFTSIGILGTFVGL---VWGLKDFQPSD 168
Query: 161 IAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAI 220
A S+ + GI + ++ + G+ SI + + + ++ F + F
Sbjct: 169 YAAMTSSVSSLVDGIKVAFLTSIYGIAFSI---VYTSGMKSEYSSMTENLQLFLDRFHTY 225
Query: 221 LS 222
+
Sbjct: 226 VM 227
>gi|167945745|ref|ZP_02532819.1| MotA/TolQ/ExbB proton channel [Endoriftia persephone
'Hot96_1+Hot96_2']
Length = 79
Score = 39.4 bits (91), Expect = 0.36, Method: Composition-based stats.
Identities = 7/39 (17%), Positives = 15/39 (38%)
Query: 173 PGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
I ++ + GL +IP + Y + + +E
Sbjct: 22 ASISVAMNTTAFGLMAAIPLLLVYTLLQSRTTQIVDSLE 60
>gi|88858086|ref|ZP_01132728.1| putative Chemotaxis motA protein [Pseudoalteromonas tunicata D2]
gi|88819703|gb|EAR29516.1| putative Chemotaxis motA protein [Pseudoalteromonas tunicata D2]
Length = 255
Score = 39.4 bits (91), Expect = 0.37, Method: Composition-based stats.
Identities = 29/163 (17%), Positives = 58/163 (35%), Gaps = 11/163 (6%)
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQ------DRIDRMMDVAIAR 123
+ +KN ++S E S + + + ++ M++ +
Sbjct: 75 DEGISKIKNWSQKARQDGYLSLEKEALASKEHFINKGLNMLIDGVEAEQFRSAMEIELLF 134
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISIL 183
+ E + + +M +GILGAVLG++ I + GI + I+ +
Sbjct: 135 QRESLLKSAKIYEAMGGYSPTIGILGAVLGLIQAMSFIKQ----PEMLGAGIATAFIATI 190
Query: 184 LGLCVSIPSSI-AYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
G+ + + NK ++ + E A AIL T
Sbjct: 191 YGVGFANLLFLPIANKLRFLIEQKMLYNELLAEGMLAILQGDT 233
>gi|217974158|ref|YP_002358909.1| flagellar motor protein PomA [Shewanella baltica OS223]
gi|304409469|ref|ZP_07391089.1| MotA/TolQ/ExbB proton channel [Shewanella baltica OS183]
gi|307303827|ref|ZP_07583580.1| MotA/TolQ/ExbB proton channel [Shewanella baltica BA175]
gi|217499293|gb|ACK47486.1| MotA/TolQ/ExbB proton channel [Shewanella baltica OS223]
gi|304351987|gb|EFM16385.1| MotA/TolQ/ExbB proton channel [Shewanella baltica OS183]
gi|306912725|gb|EFN43148.1| MotA/TolQ/ExbB proton channel [Shewanella baltica BA175]
Length = 255
Score = 39.4 bits (91), Expect = 0.37, Method: Composition-based stats.
Identities = 13/79 (16%), Positives = 34/79 (43%), Gaps = 4/79 (5%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ + ++ IA E + + G +G++G ++G++ ++ S+
Sbjct: 119 EVVRAALEKDIALTEERHRTGIGIFRAFGDVGPAMGMIGTLVGLVAMLSNM----SDPKS 174
Query: 171 SIPGIIESLISILLGLCVS 189
P + +L++ L G V+
Sbjct: 175 IGPSMAVALLTTLYGAMVA 193
>gi|319790062|ref|YP_004151695.1| MotA/TolQ/ExbB proton channel [Thermovibrio ammonificans HB-1]
gi|317114564|gb|ADU97054.1| MotA/TolQ/ExbB proton channel [Thermovibrio ammonificans HB-1]
Length = 253
Score = 39.4 bits (91), Expect = 0.38, Method: Composition-based stats.
Identities = 14/80 (17%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
+ I + A+A+ ++++ +++ S+ G++G ++G++ Q++ S+
Sbjct: 122 IEEIKSTAESAMAQIDQKLSTEVAVWESLGDLFPAFGMIGTLIGLIQMLQNL----SDPS 177
Query: 170 VSIPGIIESLISILLGLCVS 189
PG+ ++I+ L G ++
Sbjct: 178 ALGPGMAVAMITTLYGAILA 197
>gi|167644833|ref|YP_001682496.1| flagellar motor protein MotA [Caulobacter sp. K31]
gi|167347263|gb|ABZ69998.1| MotA/TolQ/ExbB proton channel [Caulobacter sp. K31]
Length = 289
Score = 39.4 bits (91), Expect = 0.38, Method: Composition-based stats.
Identities = 25/134 (18%), Positives = 47/134 (35%), Gaps = 10/134 (7%)
Query: 97 KSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMG 156
+ P ++D +++ ++ L L S++ A +GI+ AVLG++
Sbjct: 133 RMMTMNLEDPHQVEDAMEKQLEKHHHEGLAPAHA----LQSLADALPALGIVAAVLGVIK 188
Query: 157 FFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANE 216
SI V I +L+ LG+ ++ F + F
Sbjct: 189 TMGSIT---EPPAVLGAMIGGALVGTFLGVFLAYGLV---GPFSTRLTAVVDEEGAFYRI 242
Query: 217 FSAILSRQTEGNIS 230
A+L GN +
Sbjct: 243 IQAVLVAHLHGNAA 256
>gi|134300282|ref|YP_001113778.1| MotA/TolQ/ExbB proton channel [Desulfotomaculum reducens MI-1]
gi|134052982|gb|ABO50953.1| MotA/TolQ/ExbB proton channel [Desulfotomaculum reducens MI-1]
Length = 260
Score = 39.4 bits (91), Expect = 0.38, Method: Composition-based stats.
Identities = 12/79 (15%), Positives = 31/79 (39%), Gaps = 4/79 (5%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ + +++ + E + +GI+G V+G++ ++ S+
Sbjct: 122 EMVRSILETEVYSAYERHQVGVHIFEGAGGYAPTMGIIGTVMGLVHVLGNL----SDPDS 177
Query: 171 SIPGIIESLISILLGLCVS 189
P I + I+ L G+ +
Sbjct: 178 LGPAIAMAFIATLYGVGSA 196
>gi|254491616|ref|ZP_05104795.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Methylophaga thiooxidans DMS010]
gi|224463094|gb|EEF79364.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Methylophaga thiooxydans DMS010]
Length = 246
Score = 39.4 bits (91), Expect = 0.38, Method: Composition-based stats.
Identities = 22/123 (17%), Positives = 51/123 (41%), Gaps = 6/123 (4%)
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGAR--SPIGIQDRIDRMMDVAIARELE 126
LE + + + GL + AM E KG + + + I +M+ + +
Sbjct: 78 LEKILEWNQIARREGLVRLESVAMDETDLFVQKGLQLIADGAEPELIREVMENDLDIQES 137
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGL 186
+ + +M +GI+GAV+G++ ++A + GI + ++ + G+
Sbjct: 138 DDIQAAKVFEAMGGYSPTIGIIGAVMGLIHVMGNLA----DPSSLGSGIAVAFVATIYGV 193
Query: 187 CVS 189
++
Sbjct: 194 ALA 196
>gi|56461235|ref|YP_156516.1| flagellar motor protein PomA [Idiomarina loihiensis L2TR]
gi|56180245|gb|AAV82967.1| Flagellar motor component [Idiomarina loihiensis L2TR]
Length = 255
Score = 39.4 bits (91), Expect = 0.38, Method: Composition-based stats.
Identities = 17/140 (12%), Positives = 53/140 (37%), Gaps = 9/140 (6%)
Query: 69 LETVCKSLKNHHNIGLAAIFMSAM--SEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
++T + + G A+ + + ++K D + + + + I
Sbjct: 77 IDTAVEMADSARKGGFLALEEAEIPNKFFRKGVDMLVDGHDA--EVVRQTLSKDIKMSFA 134
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGL 186
E +S +G++G ++G++ ++ + P + +L++ L G
Sbjct: 135 RHEEGARVFKILSDVSPAMGMIGTLIGLVAMLSNM----DDPKAIGPAMAVALLTTLYGA 190
Query: 187 CVS-IPSSIAYNKFIEDSKK 205
++ + + NK + +++
Sbjct: 191 FLANVIAIPIANKLLLRAEQ 210
>gi|325981886|ref|YP_004294288.1| MotA/TolQ/ExbB proton channel [Nitrosomonas sp. AL212]
gi|325531405|gb|ADZ26126.1| MotA/TolQ/ExbB proton channel [Nitrosomonas sp. AL212]
Length = 252
Score = 39.4 bits (91), Expect = 0.39, Method: Composition-based stats.
Identities = 22/139 (15%), Positives = 54/139 (38%), Gaps = 6/139 (4%)
Query: 83 GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAG 142
L + +A + K + +++ ++++ I + +
Sbjct: 101 ALESYIPAAKDAFSK-KGLQLLADGSTPEKLREVLEIDITALETHQRQSARIWEAAGGYA 159
Query: 143 LLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSI-AYNKFIE 201
+GILGAVLG++ +++ S+ + GI + ++ + G+ ++ + NK
Sbjct: 160 PTIGILGAVLGLIHVMENL----SDPSLLGSGIAVAFVATIYGVGLANLVFLPISNKLKN 215
Query: 202 DSKKFAMQMEGFANEFSAI 220
+ + E + F AI
Sbjct: 216 IIGEHVVMQEMLMDGFVAI 234
>gi|268679795|ref|YP_003304226.1| MotA/TolQ/ExbB proton channel [Sulfurospirillum deleyianum DSM
6946]
gi|268617826|gb|ACZ12191.1| MotA/TolQ/ExbB proton channel [Sulfurospirillum deleyianum DSM
6946]
Length = 258
Score = 39.4 bits (91), Expect = 0.39, Method: Composition-based stats.
Identities = 17/119 (14%), Positives = 42/119 (35%), Gaps = 5/119 (4%)
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
+ + + L + E+ K A + I+ +++ + E
Sbjct: 83 DLAVIARRDGILALETHANAMDDEFFKKGLSMAVDGTEAHE-IEETLEIMLEETEEYYHG 141
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVS 189
+ + ++G++GAVLG++ Q + N GI + + + G+ +
Sbjct: 142 AAHYWLLAGESCPVIGLIGAVLGLILALQKL----DNPAEMAAGIAGAFTATVTGIAGA 196
>gi|71279500|ref|YP_267836.1| flagellar motor protein PomA [Colwellia psychrerythraea 34H]
gi|71145240|gb|AAZ25713.1| sodium-driven polar flagellar protein [Colwellia psychrerythraea
34H]
Length = 254
Score = 39.4 bits (91), Expect = 0.39, Method: Composition-based stats.
Identities = 23/205 (11%), Positives = 65/205 (31%), Gaps = 34/205 (16%)
Query: 6 LAIMDISIFALFMQMGLA----VKCIIT-----LLFIFS------ILSWSVIIQKSVNFI 50
L + + + A+ + + + ++ + + S II K+ F
Sbjct: 10 LGAIGLLVMAMVLSGDIMMFADTQSVLIVFCGSIFIVLSNYNLGQFFGIGKIIGKAFMFK 69
Query: 51 TLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQ 110
+ E+L + + G A+ + ++
Sbjct: 70 -----LEKPEELIEKAVDMADAARK------GGFLALEEAEITNPFMQKGVDMLVDGHDA 118
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
D + + I E + +++ +G++G ++G++ ++ +
Sbjct: 119 DVVRATLQKDINLTTERHETGSDMMMALADVAPAMGMIGTLIGLVAMLSNM----DDPKS 174
Query: 171 SIPGIIESLISILLGLC----VSIP 191
P + +L++ L G ++IP
Sbjct: 175 IGPAMAVALLTTLYGAFLANVIAIP 199
>gi|315186379|gb|EFU20139.1| MotA/TolQ/ExbB proton channel [Spirochaeta thermophila DSM 6578]
Length = 262
Score = 39.4 bits (91), Expect = 0.40, Method: Composition-based stats.
Identities = 18/124 (14%), Positives = 45/124 (36%), Gaps = 6/124 (4%)
Query: 65 SGQSLETVCKSLKNHHNIGLAAI---FMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI 121
G+ + + + GL A+ E+ + + I + I ++ +
Sbjct: 74 EGRVINDLVAYAERARREGLLALEDNLDEIEDEFMRKGLQLVVDGID-PEIIKTVLYTEL 132
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLIS 181
S G++G ++G++ +++AG ++ + G+ +LI+
Sbjct: 133 NEMQSRHEVGAKVFDDWSKIAPAFGMIGTLIGLIAMLKNLAGGDTSAI--GQGMATALIT 190
Query: 182 ILLG 185
L G
Sbjct: 191 TLYG 194
>gi|260438797|ref|ZP_05792613.1| chemotaxis protein PomA [Butyrivibrio crossotus DSM 2876]
gi|292808786|gb|EFF67991.1| chemotaxis protein PomA [Butyrivibrio crossotus DSM 2876]
Length = 269
Score = 39.4 bits (91), Expect = 0.40, Method: Composition-based stats.
Identities = 13/79 (16%), Positives = 38/79 (48%), Gaps = 4/79 (5%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
D + +++ I + + F ++++ G G++G ++G++ +++ S+
Sbjct: 125 DLVRAILETEITCVEQRHKKVAGFWDTLAAMGPAWGMVGTLIGLINMLKNM----SDASA 180
Query: 171 SIPGIIESLISILLGLCVS 189
P + +LI+ L G ++
Sbjct: 181 LGPNMAVALITTLYGSMLA 199
>gi|332992376|gb|AEF02431.1| flagellar motor protein PomA [Alteromonas sp. SN2]
Length = 254
Score = 39.4 bits (91), Expect = 0.40, Method: Composition-based stats.
Identities = 25/197 (12%), Positives = 65/197 (32%), Gaps = 20/197 (10%)
Query: 9 MDI-SIFALFMQMGLAVKC-IITLLFIF-----SIL-----SWSVIIQK---SVNFITLR 53
MD+ ++ + +G V ++ SIL + VI+ + F +
Sbjct: 1 MDLATVIGMLGAIGFVVMAMVMGGSIAMFINVPSILIVFGGTLFVILSQYTLGQFFGAGK 60
Query: 54 RQFREFEQLFWSGQSL-ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDR 112
+ F + + L E + + G A+ + + +
Sbjct: 61 IAGKAFMFKIDTPEDLIEKIVEMADAARKGGFLALEEAEIDNPFMQKGVDMLVDGHDIEV 120
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI 172
+ + I+ E + M +G++G ++G++ ++ +
Sbjct: 121 VRETLAKDISMTTERHEFGATIFKGMGDIAPAMGMIGTLIGLVAMLSNM----DDPKSIG 176
Query: 173 PGIIESLISILLGLCVS 189
P + +L++ L G ++
Sbjct: 177 PAMAVALLTTLYGAFLA 193
>gi|119474632|ref|ZP_01614985.1| Flagellar motor component [marine gamma proteobacterium HTCC2143]
gi|119450835|gb|EAW32068.1| Flagellar motor component [marine gamma proteobacterium HTCC2143]
Length = 252
Score = 39.4 bits (91), Expect = 0.40, Method: Composition-based stats.
Identities = 25/189 (13%), Positives = 62/189 (32%), Gaps = 26/189 (13%)
Query: 14 FALFMQMGLAVKCIITLLFIFSILSWSVIIQK---SVNFITLRRQFREFEQLFWSGQS-- 68
+F M L +F + S V++ K S + + F F+
Sbjct: 26 IGMFTNMSAV-------LIVF-VGSMFVVLSKFGMSQFLGAGKVAAKAF---FFKSTDPS 74
Query: 69 --LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
++ + GL ++ + D + ++ + +E
Sbjct: 75 AMIDEIVVLADAARKGGLLSLEGKEVGNDFLQGGIQLLVDGHDPDVVKALLSKDKDKTVE 134
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGL 186
+ S ++ +G++G ++G++ ++ + P + +L++ L G
Sbjct: 135 RHEQGASIFAALGDVAPAMGMIGTLVGLVAMLSNM----DDPKSIGPAMAVALLTTLYGA 190
Query: 187 ----CVSIP 191
V+IP
Sbjct: 191 MLANMVAIP 199
>gi|294339808|emb|CAZ88171.1| Motility protein A [Thiomonas sp. 3As]
Length = 247
Score = 39.4 bits (91), Expect = 0.41, Method: Composition-based stats.
Identities = 17/79 (21%), Positives = 34/79 (43%), Gaps = 4/79 (5%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
++I ++ I T+ S VGILGAVLG++ +++A +
Sbjct: 122 EKIRSTLEQEIGAVEHHDTQAAKVYESSGGYSPTVGILGAVLGLIHVMENLA----DPSK 177
Query: 171 SIPGIIESLISILLGLCVS 189
GI + ++ + G+ +
Sbjct: 178 LGGGIAVAFVATVYGVGAA 196
>gi|296135639|ref|YP_003642881.1| MotA/TolQ/ExbB proton channel [Thiomonas intermedia K12]
gi|295795761|gb|ADG30551.1| MotA/TolQ/ExbB proton channel [Thiomonas intermedia K12]
Length = 247
Score = 39.4 bits (91), Expect = 0.41, Method: Composition-based stats.
Identities = 16/79 (20%), Positives = 33/79 (41%), Gaps = 4/79 (5%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
++I ++ I + S VGILGAVLG++ +++A +
Sbjct: 122 EKIRSTLEQEIGAVEHHDNQAAKVYESSGGYAPTVGILGAVLGLIHVMENLA----DPSK 177
Query: 171 SIPGIIESLISILLGLCVS 189
GI + ++ + G+ +
Sbjct: 178 LGGGIAVAFVATVYGVGSA 196
>gi|83589633|ref|YP_429642.1| MotA/TolQ/ExbB proton channel [Moorella thermoacetica ATCC 39073]
gi|83572547|gb|ABC19099.1| MotA/TolQ/ExbB proton channel [Moorella thermoacetica ATCC 39073]
Length = 272
Score = 39.4 bits (91), Expect = 0.41, Method: Composition-based stats.
Identities = 15/100 (15%), Positives = 37/100 (37%), Gaps = 10/100 (10%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI 172
I +++ +A + + G++G ++G++ +
Sbjct: 126 IREILETDMAYMARRHEIGYGIFKTWGNLAPSFGLIGTLIGLVQMLAKL----DKPETLG 181
Query: 173 PGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEG 212
P + +LI+ G + +AY FI + K +++ E
Sbjct: 182 PSMALALITTFYG------AIMAYMIFIPLAGKLSLRSEQ 215
>gi|222444791|ref|ZP_03607306.1| hypothetical protein METSMIALI_00404 [Methanobrevibacter smithii
DSM 2375]
gi|222434356|gb|EEE41521.1| hypothetical protein METSMIALI_00404 [Methanobrevibacter smithii
DSM 2375]
Length = 214
Score = 39.4 bits (91), Expect = 0.41, Method: Composition-based stats.
Identities = 21/202 (10%), Positives = 72/202 (35%), Gaps = 16/202 (7%)
Query: 27 IITLLFIFSILSWSVIIQKSVNFITLRR----QFREFEQLFWSGQSLETVCKSLKNHHNI 82
++ LL I +++S + + ++++ + R+ + S++ + +
Sbjct: 25 VMVLLLIIAVVSVIALGGFISEYTSMKKVGVGKIRDLIFKINTAASVDDLMNVISGSD-- 82
Query: 83 GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAG 142
+ ++E KS + S + + E E+I + L ++ G
Sbjct: 83 -IPKSQKKVLTEIAKSEALDSDSREALA-------RKLVEHEEEKIDKSLRNTDIITRVG 134
Query: 143 LLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIED 202
+G++G ++ + ++ N + I + + ++G+
Sbjct: 135 PTLGLMGTLIPLGPGLAALGAGDVNTLADALTI--AFDTTVVGIGSGALCYFISKIRRGW 192
Query: 203 SKKFAMQMEGFANEFSAILSRQ 224
++ ++ ++ +++Q
Sbjct: 193 YDQYLSDLDALSDAVLFFMNKQ 214
>gi|323341392|ref|ZP_08081636.1| flagellar motor protein A [Lactobacillus ruminis ATCC 25644]
gi|323091269|gb|EFZ33897.1| flagellar motor protein A [Lactobacillus ruminis ATCC 25644]
Length = 268
Score = 39.4 bits (91), Expect = 0.42, Method: Composition-based stats.
Identities = 10/79 (12%), Positives = 32/79 (40%), Gaps = 4/79 (5%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
++I +M+ + + + +G++GA +G++G +++
Sbjct: 135 EQIRDLMESEVDAMETRHHRMSGLFKTAGATSPTLGVMGAAIGLIGALGNLSDINK---- 190
Query: 171 SIPGIIESLISILLGLCVS 189
P I + ++ + G+ +
Sbjct: 191 LGPMIASAFVATIFGIFMG 209
>gi|119470008|ref|ZP_01612813.1| putative Chemotaxis motA protein [Alteromonadales bacterium TW-7]
gi|119446718|gb|EAW27991.1| putative Chemotaxis motA protein [Alteromonadales bacterium TW-7]
Length = 254
Score = 39.4 bits (91), Expect = 0.42, Method: Composition-based stats.
Identities = 21/128 (16%), Positives = 51/128 (39%), Gaps = 10/128 (7%)
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCD------KGARSPIGIQDRIDRMMDVAI 121
+++ + +K + +++ E D G + R+ +++ +
Sbjct: 73 NIDDAIEQVKRWSHKARQEGYLALEDEALTHSDVYAAKGLSLLVDGGSEQRLRDTLEIDL 132
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLIS 181
E E + E +M +GILGAVLG++ I ++ + G+ + I+
Sbjct: 133 MLERERLLEAARVYEAMGGYSPTIGILGAVLGLIQAMSFI----TDPQLLGAGVATAFIA 188
Query: 182 ILLGLCVS 189
+ G+ ++
Sbjct: 189 TIYGVGLA 196
>gi|296329694|ref|ZP_06872179.1| flagellar motor protein MotA [Bacillus subtilis subsp. spizizenii
ATCC 6633]
gi|305674091|ref|YP_003865763.1| motility protein A; MotA component of the stator flagellum complex
[Bacillus subtilis subsp. spizizenii str. W23]
gi|296153192|gb|EFG94056.1| flagellar motor protein MotA [Bacillus subtilis subsp. spizizenii
ATCC 6633]
gi|305412335|gb|ADM37454.1| motility protein A; MotA component of the stator flagellum complex
[Bacillus subtilis subsp. spizizenii str. W23]
Length = 270
Score = 39.4 bits (91), Expect = 0.43, Method: Composition-based stats.
Identities = 20/116 (17%), Positives = 40/116 (34%), Gaps = 5/116 (4%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ I +M + + + + +G+LGAV+G++ + N
Sbjct: 123 EFIRDIMTEEVEAMEDRHQAGAAIFTQAGTYAPTLGVLGAVIGLIAALSHM----DNTDE 178
Query: 171 SIPGIIESLISILLGLCVS-IPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
I + ++ LLG+ + NK SK+ E ++L Q
Sbjct: 179 LGHAISAAFVATLLGIFTGYVLWHPFANKLKRKSKQEVKLREVMIEGVLSVLEGQA 234
>gi|209516112|ref|ZP_03264971.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. H160]
gi|209503396|gb|EEA03393.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. H160]
Length = 254
Score = 39.4 bits (91), Expect = 0.43, Method: Composition-based stats.
Identities = 25/155 (16%), Positives = 50/155 (32%), Gaps = 13/155 (8%)
Query: 38 SWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKK 97
+W+ + R+ +Q S L K + + ++ S + + K
Sbjct: 52 TWARFFDALKLLGLAFTRARQVDQK--SLADLLEWGDQAKLNGLLAFESMDASGIHPFAK 109
Query: 98 S---CDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGM 154
S ++D + R +D + GILG+VLG+
Sbjct: 110 RGLELLANGLSTAVLEDALQRELDAYARNHMAAARVWQQ----AGGYAPTFGILGSVLGL 165
Query: 155 MGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVS 189
+ I + GI + ++ L GL ++
Sbjct: 166 IQVTNHIL----DPAQLGSGIATAFVATLYGLALA 196
>gi|16078433|ref|NP_389252.1| flagellar motor protein MotA [Bacillus subtilis subsp. subtilis
str. 168]
gi|221309233|ref|ZP_03591080.1| flagellar motor protein MotA [Bacillus subtilis subsp. subtilis
str. 168]
gi|221313561|ref|ZP_03595366.1| flagellar motor protein MotA [Bacillus subtilis subsp. subtilis
str. NCIB 3610]
gi|221318483|ref|ZP_03599777.1| flagellar motor protein MotA [Bacillus subtilis subsp. subtilis
str. JH642]
gi|221322756|ref|ZP_03604050.1| flagellar motor protein MotA [Bacillus subtilis subsp. subtilis
str. SMY]
gi|127247|sp|P28611|MOTA_BACSU RecName: Full=Motility protein A; AltName: Full=Chemotaxis protein
MotA
gi|143207|gb|AAA22602.1| motility protein A [Bacillus subtilis]
gi|2633740|emb|CAB13242.1| motility protein A; MotA component of the stator flagellum complex
[Bacillus subtilis subsp. subtilis str. 168]
Length = 270
Score = 39.4 bits (91), Expect = 0.43, Method: Composition-based stats.
Identities = 20/116 (17%), Positives = 40/116 (34%), Gaps = 5/116 (4%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ I +M + + + + +G+LGAV+G++ + N
Sbjct: 123 EFIRDIMTEEVEAMEDRHQAGAAIFTQAGTYAPTLGVLGAVIGLIAALSHM----DNTDE 178
Query: 171 SIPGIIESLISILLGLCVS-IPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
I + ++ LLG+ + NK SK+ E ++L Q
Sbjct: 179 LGHAISAAFVATLLGIFTGYVLWHPFANKLKRKSKQEVKLREVMIEGVLSVLEGQA 234
>gi|157364673|ref|YP_001471440.1| MotA/TolQ/ExbB proton channel [Thermotoga lettingae TMO]
gi|157315277|gb|ABV34376.1| MotA/TolQ/ExbB proton channel [Thermotoga lettingae TMO]
Length = 262
Score = 39.4 bits (91), Expect = 0.43, Method: Composition-based stats.
Identities = 14/75 (18%), Positives = 36/75 (48%), Gaps = 4/75 (5%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
D + MM+ + E++ + + + S + G++G ++G++ +++ +N
Sbjct: 122 DLLKNMMETEMDLIEEDLAGEKALMDSAGAYAPAYGMIGTLIGLIAMLKTL----NNPET 177
Query: 171 SIPGIIESLISILLG 185
PG+ +LI+ G
Sbjct: 178 LGPGMSVALITTFYG 192
>gi|40849957|gb|AAR95691.1| ExbB1 [Actinobacillus pleuropneumoniae]
Length = 79
Score = 39.4 bits (91), Expect = 0.43, Method: Composition-based stats.
Identities = 14/71 (19%), Positives = 33/71 (46%)
Query: 11 ISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE 70
+++ L Q + + +L SILSWS+I+ + + I +++ + S +++
Sbjct: 1 MNLTELIKQQDIVLSVSFFILVFMSILSWSIILIRLIKIIGVKKNNQVTFNRIKSDENMN 60
Query: 71 TVCKSLKNHHN 81
K +N +
Sbjct: 61 QAKKYTQNKRS 71
>gi|163749514|ref|ZP_02156762.1| flagellar motor protein [Shewanella benthica KT99]
gi|161330923|gb|EDQ01850.1| flagellar motor protein [Shewanella benthica KT99]
Length = 255
Score = 39.4 bits (91), Expect = 0.44, Method: Composition-based stats.
Identities = 15/85 (17%), Positives = 37/85 (43%), Gaps = 8/85 (9%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
D + ++ IA + +S ++ +G++G ++G++G ++ +
Sbjct: 119 DVVRDALEKDIALTEQRHKMGISIFTAIGDVAPAMGMIGTLVGLVGMLSNM----DDPKS 174
Query: 171 SIPGIIESLISILLGL----CVSIP 191
P + +L++ L G V+IP
Sbjct: 175 IGPAMAIALLTTLYGAMIANMVAIP 199
>gi|114567479|ref|YP_754633.1| hypothetical protein Swol_1965 [Syntrophomonas wolfei subsp. wolfei
str. Goettingen]
gi|114338414|gb|ABI69262.1| conserved hypothetical protein [Syntrophomonas wolfei subsp. wolfei
str. Goettingen]
Length = 212
Score = 39.4 bits (91), Expect = 0.44, Method: Composition-based stats.
Identities = 32/211 (15%), Positives = 71/211 (33%), Gaps = 24/211 (11%)
Query: 21 GLAVKCIITLLFIFSILSWSVIIQKSVNFITL---RRQFR----EFEQLFWSGQSLETVC 73
GL V +I LL ++ VI++ + RR+ + E F + E +
Sbjct: 19 GLLVPTLIILLLFVAL----VIVEMGSLLVEALGERRRSKVNIPELLNAFKE-KDFEGIR 73
Query: 74 KSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLS 133
+ N L +A+SE K D S + R+ ++ AR
Sbjct: 74 DEI---MNSSLLRRQKAALSELLKYNDLPGVSRQALARRLLGDEELYYARITSRTD---- 126
Query: 134 FLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSS 193
++ G + G++ ++ + ++ + + I + + + GL + +
Sbjct: 127 ---LVARLGPMFGLMATLIPLGPGLIALGQGDTKTLADSLLI--AFDATVTGLAAAGVAY 181
Query: 194 IAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+ + +E +L R+
Sbjct: 182 AISQLRKRWYEDYLAGLEALMESLLEVLERE 212
>gi|218231425|ref|YP_002369308.1| flagellar motor protein MotA [Bacillus cereus B4264]
gi|218159382|gb|ACK59374.1| chemotaxis protein MotA [Bacillus cereus B4264]
Length = 264
Score = 39.0 bits (90), Expect = 0.45, Method: Composition-based stats.
Identities = 12/95 (12%), Positives = 40/95 (42%), Gaps = 7/95 (7%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ ++++++ + E + + + +G+LGAV+G++ ++ ++
Sbjct: 124 EDLEQILESELEAIEERHAKGAAIFSQAGTYAPTLGVLGAVIGLVAALGNL----TDIEK 179
Query: 171 SIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKK 205
I + I+ + G+ + ++ F K+
Sbjct: 180 LGHAISGAFIATIFGIFSG---YVLWHPFANKLKQ 211
>gi|218533171|ref|YP_002423987.1| MotA/TolQ/ExbB proton channel [Methylobacterium chloromethanicum
CM4]
gi|240141686|ref|YP_002966166.1| putative chemotaxis protein (flagellar motor component)
[Methylobacterium extorquens AM1]
gi|254564194|ref|YP_003071289.1| chemotaxis protein [Methylobacterium extorquens DM4]
gi|218525474|gb|ACK86059.1| MotA/TolQ/ExbB proton channel [Methylobacterium chloromethanicum
CM4]
gi|240011663|gb|ACS42889.1| putative chemotaxis protein (flagellar motor component)
[Methylobacterium extorquens AM1]
gi|254271472|emb|CAX27487.1| putative chemotaxis protein (flagellar motor component)
[Methylobacterium extorquens DM4]
Length = 257
Score = 39.0 bits (90), Expect = 0.45, Method: Composition-based stats.
Identities = 16/80 (20%), Positives = 33/80 (41%), Gaps = 4/80 (5%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
+D I M+ L + E + G++G +LGM+ F ++ S+
Sbjct: 120 RDFIRDTMERDRDNFLMHLDEGSKIYRAFGDCAPAWGMIGTILGMVTMFANM----SDPS 175
Query: 170 VSIPGIIESLISILLGLCVS 189
P + +L++ L G ++
Sbjct: 176 KLGPAMATALLATLYGALIA 195
>gi|126738568|ref|ZP_01754273.1| flagellar motor protein MotA [Roseobacter sp. SK209-2-6]
gi|126720367|gb|EBA17073.1| flagellar motor protein MotA [Roseobacter sp. SK209-2-6]
Length = 289
Score = 39.0 bits (90), Expect = 0.45, Method: Composition-based stats.
Identities = 18/93 (19%), Positives = 39/93 (41%), Gaps = 7/93 (7%)
Query: 97 KSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMG 156
+S P +++ +++ M+ + + L +M+ +GI+ AVLG++
Sbjct: 132 RSASMNYDDPHQVEEVLEKRMEANLHHAMHSSHA----LQTMADGLPALGIVAAVLGVIK 187
Query: 157 FFQSIAGYYSNNVVSIPGIIESLISILLGLCVS 189
SI V I +L+ LG+ ++
Sbjct: 188 TMGSI---DQPPEVLGKMIGGALVGTFLGVFLA 217
>gi|188584557|ref|YP_001928002.1| MotA/TolQ/ExbB proton channel [Methylobacterium populi BJ001]
gi|179348055|gb|ACB83467.1| MotA/TolQ/ExbB proton channel [Methylobacterium populi BJ001]
Length = 257
Score = 39.0 bits (90), Expect = 0.46, Method: Composition-based stats.
Identities = 16/80 (20%), Positives = 33/80 (41%), Gaps = 4/80 (5%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
+D I M+ L + E + G++G +LGM+ F ++ S+
Sbjct: 120 RDFIRDTMERDRDNFLMHLDEGSKIYRAFGDCAPAWGMIGTILGMVTMFANM----SDPS 175
Query: 170 VSIPGIIESLISILLGLCVS 189
P + +L++ L G ++
Sbjct: 176 KLGPAMATALLATLYGALIA 195
>gi|163854226|ref|YP_001642269.1| MotA/TolQ/ExbB proton channel [Methylobacterium extorquens PA1]
gi|163665831|gb|ABY33198.1| MotA/TolQ/ExbB proton channel [Methylobacterium extorquens PA1]
Length = 272
Score = 39.0 bits (90), Expect = 0.46, Method: Composition-based stats.
Identities = 16/80 (20%), Positives = 33/80 (41%), Gaps = 4/80 (5%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
+D I M+ L + E + G++G +LGM+ F ++ S+
Sbjct: 135 RDFIRDTMERDRDNFLMHLDEGSKIYRAFGDCAPAWGMIGTILGMVTMFANM----SDPS 190
Query: 170 VSIPGIIESLISILLGLCVS 189
P + +L++ L G ++
Sbjct: 191 KLGPAMATALLATLYGALIA 210
>gi|325107374|ref|YP_004268442.1| hypothetical protein Plabr_0797 [Planctomyces brasiliensis DSM
5305]
gi|324967642|gb|ADY58420.1| hypothetical protein Plabr_0797 [Planctomyces brasiliensis DSM
5305]
Length = 290
Score = 39.0 bits (90), Expect = 0.46, Method: Composition-based stats.
Identities = 18/112 (16%), Positives = 41/112 (36%), Gaps = 7/112 (6%)
Query: 25 KCIITLLFIFSILSWSV-IIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIG 83
+ ++ L + S++++++ + L Q RE E+L + + +
Sbjct: 5 QGVMVGLVLGSVVTFTLPAFTQGPEERRLIEQMREREELHRK----NAEREEEETREKVE 60
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFL 135
A M A E+ + + R +Q+R+ R + E + L
Sbjct: 61 RAEEAMRAREEFLRQRVQ--RHAEEVQERMRRAQAEQHHEQEEHAERVMDNL 110
>gi|254248922|ref|ZP_04942242.1| MotA/TolQ/ExbB proton channel [Burkholderia cenocepacia PC184]
gi|124875423|gb|EAY65413.1| MotA/TolQ/ExbB proton channel [Burkholderia cenocepacia PC184]
Length = 260
Score = 39.0 bits (90), Expect = 0.46, Method: Composition-based stats.
Identities = 25/155 (16%), Positives = 50/155 (32%), Gaps = 13/155 (8%)
Query: 38 SWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKK 97
+W+ + RE ++ + L K + ++ +S + + +
Sbjct: 58 TWARFFDAVKQLRLAFVRAREVDRK--NLSDLLEWGDRAKLDGLLAFESMDVSGIHPFAR 115
Query: 98 S---CDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGM 154
S ++D + R +D L + GILG+VLG+
Sbjct: 116 RGLELLANGVSTAVLEDALQRELDAYERSRLAAVRVWQQ----AGGYAPTFGILGSVLGL 171
Query: 155 MGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVS 189
+ I PGI + ++ L GL +
Sbjct: 172 VQVTSHIL----EPAQLGPGIAVAFVATLYGLAFA 202
>gi|42521781|ref|NP_967161.1| chemotaxis motA protein [Bdellovibrio bacteriovorus HD100]
gi|39574311|emb|CAE77815.1| chemotaxis motA protein [Bdellovibrio bacteriovorus HD100]
Length = 262
Score = 39.0 bits (90), Expect = 0.46, Method: Composition-based stats.
Identities = 26/165 (15%), Positives = 54/165 (32%), Gaps = 11/165 (6%)
Query: 49 FITLRRQFREFEQLFWSGQSLETV---CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARS 105
++ FR E S L + + K + + L K +
Sbjct: 72 LQLAKKAFRHEESR--SKVRLNEIVDCARLAKKENILALEPRLNRIEDPLLKGVLRNVVD 129
Query: 106 PIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYY 165
+ I I + + I E EE+ +GI+GAVLG++ ++
Sbjct: 130 GVDITT-IRDIFETQIHTEEEELLGGAKIWTDAGGFAPTIGIIGAVLGLIHVMGNL---- 184
Query: 166 SNNVVSIPGIIESLISILLGLCVSIPSSIAY-NKFIEDSKKFAMQ 209
++ GI + ++ + G+ + + NK + +
Sbjct: 185 TDTSKLGAGIAVAFVATVYGVSSANLLFLPLGNKLKRRVQALTRE 229
>gi|187932462|ref|YP_001885052.1| chemotaxis protein MotA [Clostridium botulinum B str. Eklund 17B]
gi|187720615|gb|ACD21836.1| chemotaxis protein MotA [Clostridium botulinum B str. Eklund 17B]
Length = 271
Score = 39.0 bits (90), Expect = 0.46, Method: Composition-based stats.
Identities = 10/79 (12%), Positives = 32/79 (40%), Gaps = 4/79 (5%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ I ++++ I+ + + G+LG ++G++ ++ +
Sbjct: 128 ESIKEILELDISEMEVRHKSGSGIFSAWGAFAPGFGMLGTLIGLIQMLANLTDSSTI--- 184
Query: 171 SIPGIIESLISILLGLCVS 189
G+ ++LI+ G ++
Sbjct: 185 -ASGMGKALITTFYGSLIA 202
>gi|120436946|ref|YP_862632.1| hypothetical protein GFO_2609 [Gramella forsetii KT0803]
gi|117579096|emb|CAL67565.1| conserved hypothetical protein, membrane [Gramella forsetii KT0803]
Length = 437
Score = 39.0 bits (90), Expect = 0.46, Method: Composition-based stats.
Identities = 17/95 (17%), Positives = 44/95 (46%), Gaps = 15/95 (15%)
Query: 139 SSAGLLVGILGAVLGMMGFFQSIAGYYSNNV--------VSIPGIIESLISILLGLCVSI 190
L +G++G +LG++G + S++ + G+ ++++ ++GL ++I
Sbjct: 63 IPTPLYLGLMGTMLGIVGGLIFMPSLSSDDTSNAIGGIDALLGGVKIAMVASVVGLLLTI 122
Query: 191 PSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
S N + ++K Q+E ++F + +
Sbjct: 123 IS----NYYFFKARK---QVEHQKHDFFTFIQTRL 150
>gi|170736168|ref|YP_001777428.1| MotA/TolQ/ExbB proton channel [Burkholderia cenocepacia MC0-3]
gi|206562637|ref|YP_002233400.1| chemotaxis protein PomA [Burkholderia cenocepacia J2315]
gi|169818356|gb|ACA92938.1| MotA/TolQ/ExbB proton channel [Burkholderia cenocepacia MC0-3]
gi|198038677|emb|CAR54637.1| chemotaxis protein PomA [Burkholderia cenocepacia J2315]
Length = 254
Score = 39.0 bits (90), Expect = 0.47, Method: Composition-based stats.
Identities = 25/155 (16%), Positives = 50/155 (32%), Gaps = 13/155 (8%)
Query: 38 SWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKK 97
+W+ + RE ++ + L K + ++ +S + + +
Sbjct: 52 TWARFFDAVKQLRLAFVRAREVDRK--NLSDLLEWGDRAKLDGLLAFESMDVSGIHPFAR 109
Query: 98 S---CDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGM 154
S ++D + R +D L + GILG+VLG+
Sbjct: 110 RGLELLANGVSTAVLEDALQRELDAYERSRLAAVRVWQQ----AGGYAPTFGILGSVLGL 165
Query: 155 MGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVS 189
+ I PGI + ++ L GL +
Sbjct: 166 VQVTSHIL----EPAQLGPGIAVAFVATLYGLAFA 196
>gi|260886727|ref|ZP_05897990.1| chemotaxis protein MotA [Selenomonas sputigena ATCC 35185]
gi|260863579|gb|EEX78079.1| chemotaxis protein MotA [Selenomonas sputigena ATCC 35185]
Length = 283
Score = 39.0 bits (90), Expect = 0.47, Method: Composition-based stats.
Identities = 15/79 (18%), Positives = 35/79 (44%), Gaps = 4/79 (5%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
D + ++D I+ E + L + +G+LGAV+G++ +++ V
Sbjct: 148 DFVSDVLDAEISVMQERHSLGRLMLMQAGTYAPTLGVLGAVIGLIAALSNLSDVN----V 203
Query: 171 SIPGIIESLISILLGLCVS 189
I + ++ +LG+ +
Sbjct: 204 VGHAIAAAFVATILGIYTA 222
>gi|194014874|ref|ZP_03053491.1| chemotaxis protein MotA (Motility protein A) [Bacillus pumilus ATCC
7061]
gi|194013900|gb|EDW23465.1| chemotaxis protein MotA (Motility protein A) [Bacillus pumilus ATCC
7061]
Length = 264
Score = 39.0 bits (90), Expect = 0.47, Method: Composition-based stats.
Identities = 14/95 (14%), Positives = 35/95 (36%), Gaps = 7/95 (7%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ I ++ + E + +G+LGAV+G++ ++ +
Sbjct: 123 EFIRDVLTEEVDAMSERHQSGALIFTQAGTYAPTLGVLGAVVGLIAALANMG----DIEA 178
Query: 171 SIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKK 205
I + ++ LLG+ + ++ F K+
Sbjct: 179 LGHAISAAFVATLLGIFTG---YVLWHPFANKLKR 210
>gi|296504988|ref|YP_003666688.1| flagellar motor protein MotA [Bacillus thuringiensis BMB171]
gi|296326040|gb|ADH08968.1| flagellar motor protein MotA [Bacillus thuringiensis BMB171]
Length = 264
Score = 39.0 bits (90), Expect = 0.48, Method: Composition-based stats.
Identities = 12/95 (12%), Positives = 40/95 (42%), Gaps = 7/95 (7%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ ++++++ + E + + + +G+LGAV+G++ ++ ++
Sbjct: 124 EDLEQILESELEAIEERHAKGAAIFSQAGTYAPTLGVLGAVIGLVAALGNL----TDIEK 179
Query: 171 SIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKK 205
I + I+ + G+ + ++ F K+
Sbjct: 180 LGHAISGAFIATIFGIFSG---YVLWHPFANKLKQ 211
>gi|229017015|ref|ZP_04173935.1| Chemotaxis protein, MotA [Bacillus cereus AH1273]
gi|229023197|ref|ZP_04179708.1| Chemotaxis protein, MotA [Bacillus cereus AH1272]
gi|228738122|gb|EEL88607.1| Chemotaxis protein, MotA [Bacillus cereus AH1272]
gi|228744286|gb|EEL94368.1| Chemotaxis protein, MotA [Bacillus cereus AH1273]
Length = 116
Score = 39.0 bits (90), Expect = 0.48, Method: Composition-based stats.
Identities = 10/77 (12%), Positives = 35/77 (45%), Gaps = 4/77 (5%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI 172
+ ++ + E+ E+ + + L + G++G ++G++ Q++ +
Sbjct: 10 LKEVLMKDVETEVYELRKGATLLDKIGDFAPAYGMIGTLIGLIIMLQNL----QDTSQIA 65
Query: 173 PGIIESLISILLGLCVS 189
G+ ++++ L G ++
Sbjct: 66 TGMAVAMLTTLYGSIIA 82
>gi|258404711|ref|YP_003197453.1| MotA/TolQ/ExbB proton channel [Desulfohalobium retbaense DSM 5692]
gi|257796938|gb|ACV67875.1| MotA/TolQ/ExbB proton channel [Desulfohalobium retbaense DSM 5692]
Length = 261
Score = 39.0 bits (90), Expect = 0.49, Method: Composition-based stats.
Identities = 12/79 (15%), Positives = 33/79 (41%), Gaps = 4/79 (5%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
D + +D I + + S+ +G++G ++G++ Q++ +
Sbjct: 124 DVLRDTLDREIEYIEDRHEKGAEIFSSLGMYAPAMGMVGTLIGLVQMLQTL----EDPST 179
Query: 171 SIPGIIESLISILLGLCVS 189
P + +L++ L G ++
Sbjct: 180 IGPAMAMALLTTLYGSVMA 198
>gi|321315124|ref|YP_004207411.1| flagellar motor protein MotA [Bacillus subtilis BSn5]
gi|320021398|gb|ADV96384.1| flagellar motor protein MotA [Bacillus subtilis BSn5]
Length = 270
Score = 39.0 bits (90), Expect = 0.49, Method: Composition-based stats.
Identities = 20/116 (17%), Positives = 40/116 (34%), Gaps = 5/116 (4%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ I +M + + + + +G+LGAV+G++ + N
Sbjct: 123 EFIRDIMTEEVEAMEDRHQAGAAIFTQAGTYAPTLGVLGAVIGLIAALSHM----DNTDE 178
Query: 171 SIPGIIESLISILLGLCVS-IPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
I + ++ LLG+ + NK SK+ E ++L Q
Sbjct: 179 LGHAISAAFVATLLGIFTGYVLWHPFANKLKRKSKQEVKLREVMIEGVLSVLEGQA 234
>gi|157692041|ref|YP_001486503.1| flagellar motor protein MotA [Bacillus pumilus SAFR-032]
gi|157680799|gb|ABV61943.1| flagellar motor protein A [Bacillus pumilus SAFR-032]
Length = 264
Score = 39.0 bits (90), Expect = 0.49, Method: Composition-based stats.
Identities = 14/95 (14%), Positives = 35/95 (36%), Gaps = 7/95 (7%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ I ++ + E + +G+LGAV+G++ ++ +
Sbjct: 123 EFIRDVLTEEVDAMAERHQSGALIFTQAGTYAPTLGVLGAVVGLIAALANMG----DIEA 178
Query: 171 SIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKK 205
I + ++ LLG+ + ++ F K+
Sbjct: 179 LGHAISAAFVATLLGIFTG---YVLWHPFANKLKR 210
>gi|148643778|ref|YP_001274291.1| biopolymer transport protein [Methanobrevibacter smithii ATCC
35061]
gi|261350635|ref|ZP_05976052.1| MotA/TolQ/ExbB proton channel [Methanobrevibacter smithii DSM 2374]
gi|148552795|gb|ABQ87923.1| predicted biopolymer transport protein [Methanobrevibacter smithii
ATCC 35061]
gi|288861418|gb|EFC93716.1| MotA/TolQ/ExbB proton channel [Methanobrevibacter smithii DSM 2374]
Length = 214
Score = 39.0 bits (90), Expect = 0.49, Method: Composition-based stats.
Identities = 21/202 (10%), Positives = 72/202 (35%), Gaps = 16/202 (7%)
Query: 27 IITLLFIFSILSWSVIIQKSVNFITLRR----QFREFEQLFWSGQSLETVCKSLKNHHNI 82
++ LL I +++S + + ++++ + R+ + S++ + +
Sbjct: 25 VMVLLLIIAVVSVIALGGFISEYTSMKKVGVGKIRDLIFKINTAASVDDLMNVISGSD-- 82
Query: 83 GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAG 142
+ ++E KS + S + + E E+I + L ++ G
Sbjct: 83 -IPKSQKKVLTEIAKSEALDSDSREALA-------RKLVEHEEEKIDKSLRNTDIITRVG 134
Query: 143 LLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIED 202
+G++G ++ + ++ N + I + + ++G+
Sbjct: 135 PTLGLMGTLIPLGPGLAALGAGDVNTLADALTI--AFDTTVVGIGSGALCYFISKIRRGW 192
Query: 203 SKKFAMQMEGFANEFSAILSRQ 224
++ ++ ++ +++Q
Sbjct: 193 YDQYLSDLDALSDAVLFFMNKQ 214
>gi|260574391|ref|ZP_05842395.1| flagellar motor protein MotA [Rhodobacter sp. SW2]
gi|259023287|gb|EEW26579.1| flagellar motor protein MotA [Rhodobacter sp. SW2]
Length = 289
Score = 39.0 bits (90), Expect = 0.50, Method: Composition-based stats.
Identities = 18/93 (19%), Positives = 40/93 (43%), Gaps = 7/93 (7%)
Query: 97 KSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMG 156
++ P +++ +D+ M+ + L L S++ A +GI+ AVLG++
Sbjct: 132 RAASMNYDDPHQVEEVLDKRMETSHTHALHTSHA----LQSIADALPALGIVAAVLGVIK 187
Query: 157 FFQSIAGYYSNNVVSIPGIIESLISILLGLCVS 189
+I + I +L+ LG+ ++
Sbjct: 188 TMGAI---DQPPAILGKMIGSALVGTFLGVFLA 217
>gi|87123981|ref|ZP_01079831.1| hypothetical protein RS9917_10236 [Synechococcus sp. RS9917]
gi|86168550|gb|EAQ69807.1| hypothetical protein RS9917_10236 [Synechococcus sp. RS9917]
Length = 173
Score = 39.0 bits (90), Expect = 0.50, Method: Composition-based stats.
Identities = 24/173 (13%), Positives = 60/173 (34%), Gaps = 42/173 (24%)
Query: 26 CIITL-LFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGL 84
++ + L + S+ +V I + + R+ + S S T ++
Sbjct: 11 GVLIVPLLLLSVAVVAVAIDRLRFWWRWRQVGAAQLEALLSEVSDRTAAQAA-------- 62
Query: 85 AAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLL 144
Q+R+ R ++ + ++ L G L
Sbjct: 63 -----------------------LHQERLCRRLERS-------LSRWDGCLELAMVLGPL 92
Query: 145 VGILGAVLGMMGFFQSIAGY---YSNNVVSIPGIIESLISILLGLCVSIPSSI 194
+G+L +V+G+M + + + + + G + L+ +LGL ++ + +
Sbjct: 93 LGLLASVVGLMRLLRDLGPDLVLPAQSAALVVGYGQVLVGTVLGLLIATIALV 145
>gi|239996640|ref|ZP_04717164.1| flagellar motor protein PomA [Alteromonas macleodii ATCC 27126]
Length = 253
Score = 39.0 bits (90), Expect = 0.51, Method: Composition-based stats.
Identities = 15/121 (12%), Positives = 40/121 (33%), Gaps = 4/121 (3%)
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+E + + G A+ + +S + + + I+ E
Sbjct: 77 IEKIVEMADAARKGGFLALEEAEISNEFMQKGVDMLVDGHDIEVVRETLAKDISMTTERH 136
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCV 188
S M +G++G ++G++ ++ + P + +L++ L G
Sbjct: 137 EFGASIFKGMGDVAPAMGMIGTLIGLVAMLSNM----DDPKAIGPAMAVALLTTLYGAFF 192
Query: 189 S 189
+
Sbjct: 193 A 193
>gi|206969904|ref|ZP_03230858.1| chemotaxis protein MotA [Bacillus cereus AH1134]
gi|206735592|gb|EDZ52760.1| chemotaxis protein MotA [Bacillus cereus AH1134]
Length = 264
Score = 39.0 bits (90), Expect = 0.51, Method: Composition-based stats.
Identities = 12/95 (12%), Positives = 40/95 (42%), Gaps = 7/95 (7%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ ++++++ + E + + + +G+LGAV+G++ ++ ++
Sbjct: 124 EDLEQILESELEAIEERHAKGAAIFSQAGTYAPTLGVLGAVIGLVAALGNL----TDIEK 179
Query: 171 SIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKK 205
I + I+ + G+ + ++ F K+
Sbjct: 180 LGHAISGAFIATIFGIFSG---YVLWHPFANKLKQ 211
>gi|290972374|ref|XP_002668928.1| predicted protein [Naegleria gruberi]
gi|284082466|gb|EFC36184.1| predicted protein [Naegleria gruberi]
Length = 813
Score = 39.0 bits (90), Expect = 0.51, Method: Composition-based stats.
Identities = 18/120 (15%), Positives = 43/120 (35%), Gaps = 8/120 (6%)
Query: 22 LAVKCII--TLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNH 79
L V ++ +L + S VI +S + + + + SG L +
Sbjct: 400 LVVWFVMTFFVLVL-SAG--VVIFIESSVLRRILKLSKSVRDFYESGNDFNKTIPQLGHD 456
Query: 80 HNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDR-MMDVAIARELEEITEKLSFLGSM 138
L++ ++ KK+ +K +Q+ ++R + R + + F+ +
Sbjct: 457 EIGTLSSKINQMLASLKKNQEKLVSDMDTMQEMLERTSIQEQSNRCI--MNSINEFIAIV 514
>gi|291483904|dbj|BAI84979.1| flagellar motor protein MotA [Bacillus subtilis subsp. natto
BEST195]
Length = 269
Score = 39.0 bits (90), Expect = 0.52, Method: Composition-based stats.
Identities = 16/99 (16%), Positives = 37/99 (37%), Gaps = 7/99 (7%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ I +M + + + + +G+LGAV+G++ + N
Sbjct: 123 EFIRDIMTEEVEAMEDRHQAGAAIFTQAGTYAPTLGVLGAVIGLIAALSHM----DNTDE 178
Query: 171 SIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQ 209
I + ++ LLG+ + ++ F K+ + Q
Sbjct: 179 LGHAISAAFVATLLGIFTG---YVLWHPFANKLKRKSKQ 214
>gi|255261774|ref|ZP_05341116.1| chemotaxis protein MotA [Thalassiobium sp. R2A62]
gi|255104109|gb|EET46783.1| chemotaxis protein MotA [Thalassiobium sp. R2A62]
Length = 289
Score = 39.0 bits (90), Expect = 0.52, Method: Composition-based stats.
Identities = 22/144 (15%), Positives = 55/144 (38%), Gaps = 10/144 (6%)
Query: 46 SVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARS 105
I + R ++ + +N A +S + + ++
Sbjct: 84 LFELIRIARADAIALEVHIEAPEKSKIFAKYENILQDQEA---VSLICDTLRTGSMNYDD 140
Query: 106 PIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYY 165
P +++ +D ++ +++R++ L +++ +GI+ AVLG++ SI
Sbjct: 141 PHQVEEVLDNRIEESLSRKMHSTHA----LQTIADGLPALGIVAAVLGVIKTMASI---D 193
Query: 166 SNNVVSIPGIIESLISILLGLCVS 189
V I +L+ LG+ ++
Sbjct: 194 QPPEVLGKMIGGALVGTFLGVFLA 217
>gi|228960777|ref|ZP_04122415.1| hypothetical protein bthur0005_42340 [Bacillus thuringiensis
serovar pakistani str. T13001]
gi|229048217|ref|ZP_04193786.1| hypothetical protein bcere0027_41860 [Bacillus cereus AH676]
gi|229111974|ref|ZP_04241518.1| hypothetical protein bcere0018_42180 [Bacillus cereus Rock1-15]
gi|229147070|ref|ZP_04275430.1| hypothetical protein bcere0012_42080 [Bacillus cereus BDRD-ST24]
gi|228636458|gb|EEK92928.1| hypothetical protein bcere0012_42080 [Bacillus cereus BDRD-ST24]
gi|228671538|gb|EEL26838.1| hypothetical protein bcere0018_42180 [Bacillus cereus Rock1-15]
gi|228723204|gb|EEL74580.1| hypothetical protein bcere0027_41860 [Bacillus cereus AH676]
gi|228798912|gb|EEM45888.1| hypothetical protein bthur0005_42340 [Bacillus thuringiensis
serovar pakistani str. T13001]
Length = 266
Score = 39.0 bits (90), Expect = 0.52, Method: Composition-based stats.
Identities = 12/95 (12%), Positives = 40/95 (42%), Gaps = 7/95 (7%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ ++++++ + E + + + +G+LGAV+G++ ++ ++
Sbjct: 126 EDLEQILESELEAIEERHAKGAAIFSQAGTYAPTLGVLGAVIGLVAALGNL----TDIEK 181
Query: 171 SIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKK 205
I + I+ + G+ + ++ F K+
Sbjct: 182 LGHAISGAFIATIFGIFSG---YVLWHPFANKLKQ 213
>gi|228923255|ref|ZP_04086545.1| hypothetical protein bthur0011_42350 [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
gi|228954781|ref|ZP_04116802.1| hypothetical protein bthur0006_41490 [Bacillus thuringiensis
serovar kurstaki str. T03a001]
gi|229081764|ref|ZP_04214257.1| hypothetical protein bcere0023_43930 [Bacillus cereus Rock4-2]
gi|229152705|ref|ZP_04280892.1| hypothetical protein bcere0011_42390 [Bacillus cereus m1550]
gi|229180777|ref|ZP_04308115.1| hypothetical protein bcere0005_41210 [Bacillus cereus 172560W]
gi|229192710|ref|ZP_04319669.1| hypothetical protein bcere0002_43610 [Bacillus cereus ATCC 10876]
gi|228590800|gb|EEK48660.1| hypothetical protein bcere0002_43610 [Bacillus cereus ATCC 10876]
gi|228602755|gb|EEK60238.1| hypothetical protein bcere0005_41210 [Bacillus cereus 172560W]
gi|228630768|gb|EEK87410.1| hypothetical protein bcere0011_42390 [Bacillus cereus m1550]
gi|228701609|gb|EEL54102.1| hypothetical protein bcere0023_43930 [Bacillus cereus Rock4-2]
gi|228804901|gb|EEM51499.1| hypothetical protein bthur0006_41490 [Bacillus thuringiensis
serovar kurstaki str. T03a001]
gi|228836461|gb|EEM81812.1| hypothetical protein bthur0011_42350 [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
Length = 266
Score = 39.0 bits (90), Expect = 0.52, Method: Composition-based stats.
Identities = 12/95 (12%), Positives = 40/95 (42%), Gaps = 7/95 (7%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ ++++++ + E + + + +G+LGAV+G++ ++ ++
Sbjct: 126 EDLEQILESELEAIEERHAKGAAIFSQAGTYAPTLGVLGAVIGLVAALGNL----TDIEK 181
Query: 171 SIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKK 205
I + I+ + G+ + ++ F K+
Sbjct: 182 LGHAISGAFIATIFGIFSG---YVLWHPFANKLKQ 213
>gi|149178986|ref|ZP_01857561.1| hypothetical protein PM8797T_10549 [Planctomyces maris DSM 8797]
gi|148842185|gb|EDL56573.1| hypothetical protein PM8797T_10549 [Planctomyces maris DSM 8797]
Length = 218
Score = 39.0 bits (90), Expect = 0.52, Method: Composition-based stats.
Identities = 26/133 (19%), Positives = 46/133 (34%), Gaps = 8/133 (6%)
Query: 66 GQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
SL+ + LK+ + + + ++ DR V I E
Sbjct: 42 ASSLDDFTRGLKHRSLLDSTGHLSDQIEAFLADVNETLDPQANPADRKALSERVHILDEK 101
Query: 126 EEI------TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVS--IPGIIE 177
+ +M A L G+LG +L M Q+ AG + N +S + +
Sbjct: 102 RRYLDSHFFETCYNICRTMIEAYPLAGVLGTILAMGAALQANAGTETTNAISSIVSHFGD 161
Query: 178 SLISILLGLCVSI 190
++ S GL +I
Sbjct: 162 AIWSTFAGLAAAI 174
>gi|30022591|ref|NP_834222.1| flagellar motor protein MotA [Bacillus cereus ATCC 14579]
gi|229129796|ref|ZP_04258763.1| hypothetical protein bcere0015_42370 [Bacillus cereus BDRD-Cer4]
gi|29898149|gb|AAP11423.1| Chemotaxis motA protein [Bacillus cereus ATCC 14579]
gi|228653712|gb|EEL09583.1| hypothetical protein bcere0015_42370 [Bacillus cereus BDRD-Cer4]
Length = 266
Score = 39.0 bits (90), Expect = 0.52, Method: Composition-based stats.
Identities = 12/95 (12%), Positives = 40/95 (42%), Gaps = 7/95 (7%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ ++++++ + E + + + +G+LGAV+G++ ++ ++
Sbjct: 126 EDLEQILESELEAIEERHAKGAAIFSQAGTYAPTLGVLGAVIGLVAALGNL----TDIEK 181
Query: 171 SIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKK 205
I + I+ + G+ + ++ F K+
Sbjct: 182 LGHAISGAFIATIFGIFSG---YVLWHPFANKLKQ 213
>gi|23100000|ref|NP_693466.1| flagellar motor protein MotA [Oceanobacillus iheyensis HTE831]
gi|22778231|dbj|BAC14501.1| motility protein A (flagellar motor rotation) [Oceanobacillus
iheyensis HTE831]
Length = 261
Score = 39.0 bits (90), Expect = 0.52, Method: Composition-based stats.
Identities = 25/111 (22%), Positives = 43/111 (38%), Gaps = 5/111 (4%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
D I +M I + E + + +G+LGAV+G++ + S+
Sbjct: 123 DFIKDIMLEKIEAMEQRHEEGAAIFTQAGTYAPTLGVLGAVIGLIAALGDM----SDIDA 178
Query: 171 SIPGIIESLISILLGLCVS-IPSSIAYNKFIEDSKKFAMQMEGFANEFSAI 220
I + I+ LLG+ + NK E SK+ +Q E +I
Sbjct: 179 LGAAISAAFIATLLGIFTGYVLWHPFANKLREKSKREVLQKEIIVEGILSI 229
>gi|322379331|ref|ZP_08053707.1| flagellar motor protein MotA [Helicobacter suis HS1]
gi|322380702|ref|ZP_08054841.1| flagellar motor protein MotA [Helicobacter suis HS5]
gi|321146870|gb|EFX41631.1| flagellar motor protein MotA [Helicobacter suis HS5]
gi|321148244|gb|EFX42768.1| flagellar motor protein MotA [Helicobacter suis HS1]
Length = 256
Score = 39.0 bits (90), Expect = 0.53, Method: Composition-based stats.
Identities = 17/74 (22%), Positives = 30/74 (40%), Gaps = 4/74 (5%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI 172
+ +DVAI E + + + G++GAVLG+M Q + N
Sbjct: 124 VQESLDVAIEELEEYYHGAAHYWITAGESAPTFGLVGAVLGLMLALQKL----DNPQAMA 179
Query: 173 PGIIESLISILLGL 186
GI + + + G+
Sbjct: 180 LGIAGAFTATVTGI 193
>gi|196234680|ref|ZP_03133494.1| hypothetical protein CfE428DRAFT_6662 [Chthoniobacter flavus
Ellin428]
gi|196221253|gb|EDY15809.1| hypothetical protein CfE428DRAFT_6662 [Chthoniobacter flavus
Ellin428]
Length = 96
Score = 39.0 bits (90), Expect = 0.53, Method: Composition-based stats.
Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 5/66 (7%)
Query: 128 ITEKLSFLGSMSS----AGLLVGILGAVLGMMGFFQSIAGYY-SNNVVSIPGIIESLISI 182
+ KL G + G + G LG + MMG FQ ++G S+ I +L++
Sbjct: 1 MRRKLLITGIVVGGLLFLGPVFGYLGTLFNMMGAFQDLSGSGISDPRALSAHIGNTLLAT 60
Query: 183 LLGLCV 188
+LG+
Sbjct: 61 VLGVIA 66
>gi|59711321|ref|YP_204097.1| flagellar motor protein PomA [Vibrio fischeri ES114]
gi|197334887|ref|YP_002155477.1| chemotaxis protein PomA [Vibrio fischeri MJ11]
gi|59479422|gb|AAW85209.1| flagellar motor protein MotA1 [Vibrio fischeri ES114]
gi|197316377|gb|ACH65824.1| chemotaxis protein PomA [Vibrio fischeri MJ11]
Length = 254
Score = 39.0 bits (90), Expect = 0.53, Method: Composition-based stats.
Identities = 11/75 (14%), Positives = 30/75 (40%), Gaps = 4/75 (5%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ + + IA E + + +G++G ++G++G ++ +
Sbjct: 119 EVVKATLQKDIALTNERHERGVGVFTAFGDVAPAMGMIGTLVGLVGMLSNM----DDPKS 174
Query: 171 SIPGIIESLISILLG 185
P + +L++ L G
Sbjct: 175 IGPAMAVALLTTLYG 189
>gi|78063206|ref|YP_373114.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. 383]
gi|77971091|gb|ABB12470.1| MotA/TolQ/ExbB proton channel [Burkholderia sp. 383]
Length = 254
Score = 39.0 bits (90), Expect = 0.54, Method: Composition-based stats.
Identities = 26/155 (16%), Positives = 49/155 (31%), Gaps = 13/155 (8%)
Query: 38 SWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKK 97
+W+ + RE ++ + L K + ++ +S + + +
Sbjct: 52 TWARFFDAVKQLRLAFVRAREVDRK--NLSDLLEWGDRAKLDGLLAFESMDVSGIHPFAR 109
Query: 98 S---CDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGM 154
S ++D + R +D L GILG+VLG+
Sbjct: 110 RGLELLANGVSTAVLEDALQRELDAYERSRLAAARVWQQ----AGGYAPTFGILGSVLGL 165
Query: 155 MGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVS 189
+ I PGI + I+ L GL +
Sbjct: 166 VQVTSHIL----EPAQLGPGIAVAFIATLYGLAFA 196
>gi|163748456|ref|ZP_02155710.1| TonB system transport protein ExbB1 [Shewanella benthica KT99]
gi|161332034|gb|EDQ02711.1| TonB system transport protein ExbB1 [Shewanella benthica KT99]
Length = 256
Score = 39.0 bits (90), Expect = 0.55, Method: Composition-based stats.
Identities = 29/178 (16%), Positives = 71/178 (39%), Gaps = 18/178 (10%)
Query: 29 TLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIF 88
+FI + ++ +I+++ I F ++ W L + K + + A+
Sbjct: 18 WPMFICAFIALMIILERLALVI-----FELPKRDTW----LTDLRKQSRTSDPEQVKAL- 67
Query: 89 MSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI-----ARELEEITEKLSFLGSMSSAGL 143
++ ++ + KG + ++ +R M I ++ + + L L +
Sbjct: 68 IAQLTTGRSMLSKGTYLLLTHAEQ-NRTMREEIINLWLTKQKQVLRSGLKVLQVIGIITP 126
Query: 144 LVGILGAVLGMMGFFQSIAGYYS--NNVVSIPGIIESLISILLGLCVSIPSSIAYNKF 199
L+G+LG VLG++ F + G+ ++ + GL +++P+ + F
Sbjct: 127 LLGLLGTVLGLIEMFNQLGASDGPVTPSQLASGLGLAMNTTAAGLIIAVPAITMAHLF 184
>gi|258592513|emb|CBE68822.1| Chemotaxis protein [NC10 bacterium 'Dutch sediment']
Length = 288
Score = 39.0 bits (90), Expect = 0.56, Method: Composition-based stats.
Identities = 22/93 (23%), Positives = 41/93 (44%), Gaps = 7/93 (7%)
Query: 97 KSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMG 156
+ GA P + +D +MD+ + EE + S L + + +GI+ AVLG++
Sbjct: 130 RLVVDGAVDP----EELDAIMDIELDTHHEEGGQVPSILAKVGDSLPGLGIVAAVLGIVI 185
Query: 157 FFQSIAGYYSNNVVSIPGIIESLISILLGLCVS 189
Q+I G + +L+ +G+ S
Sbjct: 186 TMQAIDG---PPEEIGHKVAVALVGTFVGILAS 215
>gi|82702443|ref|YP_412009.1| flagellar motor protein [Nitrosospira multiformis ATCC 25196]
gi|82410508|gb|ABB74617.1| MotA/TolQ/ExbB proton channel [Nitrosospira multiformis ATCC 25196]
Length = 246
Score = 39.0 bits (90), Expect = 0.57, Method: Composition-based stats.
Identities = 15/82 (18%), Positives = 38/82 (46%), Gaps = 4/82 (4%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI 172
+ R+++V I + + + +GILGAV+G++ +++ SN
Sbjct: 124 LQRVLEVEIETFEDLHHQGAKVWEAAGGYAPTIGILGAVMGLIQVMENL----SNPADLG 179
Query: 173 PGIIESLISILLGLCVSIPSSI 194
GI + ++ + G+ ++ + +
Sbjct: 180 AGIAVAFVATIYGVGLANLAFL 201
>gi|312879596|ref|ZP_07739396.1| MotA/TolQ/ExbB proton channel [Aminomonas paucivorans DSM 12260]
gi|310782887|gb|EFQ23285.1| MotA/TolQ/ExbB proton channel [Aminomonas paucivorans DSM 12260]
Length = 264
Score = 39.0 bits (90), Expect = 0.57, Method: Composition-based stats.
Identities = 18/123 (14%), Positives = 44/123 (35%), Gaps = 5/123 (4%)
Query: 67 QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
Q+L + + + + L E+ + + + + ++D I E
Sbjct: 78 QTLVSFAEKARREGLLALEEDAGQLDDEFMRKSIQLVVDGTD-PELVKSILDTEIGLLEE 136
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGL 186
S M+ G+LG ++G++ ++ + PG+ +LI+ G
Sbjct: 137 RHAAAKSMFDIMAELAPAFGMLGTLIGLILMLGNL----DDPDALGPGMATALITTFYGS 192
Query: 187 CVS 189
++
Sbjct: 193 YIA 195
>gi|326203247|ref|ZP_08193112.1| MotA/TolQ/ExbB proton channel [Clostridium papyrosolvens DSM 2782]
gi|325986505|gb|EGD47336.1| MotA/TolQ/ExbB proton channel [Clostridium papyrosolvens DSM 2782]
Length = 266
Score = 39.0 bits (90), Expect = 0.57, Method: Composition-based stats.
Identities = 17/123 (13%), Positives = 42/123 (34%), Gaps = 6/123 (4%)
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDR--IDRMMDVAIARELE 126
+ + + GL ++ A + KG + + I ++ + E
Sbjct: 78 INELADLSEKARKDGLLSLEQDAQTNKNDLIRKGLALVVDGIETEVIKDILARETELQEE 137
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGL 186
+M +G+ G V+GM+ + ++ + P I + I+ + G+
Sbjct: 138 IYESGAKMFEAMGGTWPAMGVCGTVMGMISILKDLSDSNA----LGPKISSAFIATMYGV 193
Query: 187 CVS 189
+
Sbjct: 194 AFA 196
>gi|149183514|ref|ZP_01861941.1| flagellar motor protein MotA [Bacillus sp. SG-1]
gi|148848786|gb|EDL63009.1| flagellar motor protein MotA [Bacillus sp. SG-1]
Length = 266
Score = 38.6 bits (89), Expect = 0.59, Method: Composition-based stats.
Identities = 19/99 (19%), Positives = 38/99 (38%), Gaps = 7/99 (7%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
D I +++ I E + +G+LGAV+G++ GY +
Sbjct: 123 DYIRDVLNEEIDAMEERHQAGALIFTQAGTYAPTLGVLGAVVGLIAAL----GYMEDISK 178
Query: 171 SIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQ 209
I + ++ LLG+ + ++ F K+ + Q
Sbjct: 179 LGEAISAAFVATLLGIFTG---YVLWHPFANKLKRKSKQ 214
>gi|83642950|ref|YP_431385.1| flagellar motor protein [Hahella chejuensis KCTC 2396]
gi|83630993|gb|ABC26960.1| Flagellar motor component [Hahella chejuensis KCTC 2396]
Length = 250
Score = 38.6 bits (89), Expect = 0.59, Method: Composition-based stats.
Identities = 9/79 (11%), Positives = 33/79 (41%), Gaps = 4/79 (5%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ I+ ++ + +E + + + +G+LG ++G++ ++ +
Sbjct: 108 EFIEEVLLEDTHQYVERLQTAEKVFRGLGESAPALGMLGTLVGLVQMLNNM----QDPSS 163
Query: 171 SIPGIIESLISILLGLCVS 189
P + +L++ G ++
Sbjct: 164 IGPAMAIALLTTFYGAFIA 182
>gi|326942296|gb|AEA18192.1| flagellar motor protein MotA [Bacillus thuringiensis serovar
chinensis CT-43]
Length = 264
Score = 38.6 bits (89), Expect = 0.59, Method: Composition-based stats.
Identities = 12/95 (12%), Positives = 40/95 (42%), Gaps = 7/95 (7%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ ++++++ + E + + + +G+LGAV+G++ ++ ++
Sbjct: 124 EDLEQILESELEAIEERHAKGAAIFSQAGTYAPTLGVLGAVIGLVAALGNL----TDIEK 179
Query: 171 SIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKK 205
I + I+ + G+ + ++ F K+
Sbjct: 180 LGHAISGAFIATIFGIFSG---YVLWHPFANKLKQ 211
>gi|268316338|ref|YP_003290057.1| MotA/TolQ/ExbB proton channel [Rhodothermus marinus DSM 4252]
gi|262333872|gb|ACY47669.1| MotA/TolQ/ExbB proton channel [Rhodothermus marinus DSM 4252]
Length = 262
Score = 38.6 bits (89), Expect = 0.60, Method: Composition-based stats.
Identities = 17/121 (14%), Positives = 47/121 (38%), Gaps = 5/121 (4%)
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ ++ + + L + + + A I Q+ I M+ V + E I
Sbjct: 80 FTDLSRTARREGLLALDRRLGEVEDAFIRFGLEMAVDGIEEQE-IAEMLQVRMTEEFRPI 138
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCV 188
+ S + G++G ++G++ Q++ ++ G+ ++++ L G +
Sbjct: 139 QLFAKIMNSAGTFAPSFGMIGTLIGLVQMMQNL----TDPTQIGAGMAVAMLTTLYGAVL 194
Query: 189 S 189
+
Sbjct: 195 A 195
>gi|330839449|ref|YP_004414029.1| MotA/TolQ/ExbB proton channel [Selenomonas sputigena ATCC 35185]
gi|329747213|gb|AEC00570.1| MotA/TolQ/ExbB proton channel [Selenomonas sputigena ATCC 35185]
Length = 258
Score = 38.6 bits (89), Expect = 0.60, Method: Composition-based stats.
Identities = 15/79 (18%), Positives = 35/79 (44%), Gaps = 4/79 (5%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
D + ++D I+ E + L + +G+LGAV+G++ +++ V
Sbjct: 123 DFVSDVLDAEISVMQERHSLGRLMLMQAGTYAPTLGVLGAVIGLIAALSNLSDVN----V 178
Query: 171 SIPGIIESLISILLGLCVS 189
I + ++ +LG+ +
Sbjct: 179 VGHAIAAAFVATILGIYTA 197
>gi|256750879|ref|ZP_05491763.1| MotA/TolQ/ExbB proton channel [Thermoanaerobacter ethanolicus
CCSD1]
gi|300913255|ref|ZP_07130572.1| MotA/TolQ/ExbB proton channel [Thermoanaerobacter sp. X561]
gi|307723731|ref|YP_003903482.1| MotA/TolQ/ExbB proton channel [Thermoanaerobacter sp. X513]
gi|320116544|ref|YP_004186703.1| MotA/TolQ/ExbB proton channel [Thermoanaerobacter brockii subsp.
finnii Ako-1]
gi|256750214|gb|EEU63234.1| MotA/TolQ/ExbB proton channel [Thermoanaerobacter ethanolicus
CCSD1]
gi|300889940|gb|EFK85085.1| MotA/TolQ/ExbB proton channel [Thermoanaerobacter sp. X561]
gi|307580792|gb|ADN54191.1| MotA/TolQ/ExbB proton channel [Thermoanaerobacter sp. X513]
gi|319929635|gb|ADV80320.1| MotA/TolQ/ExbB proton channel [Thermoanaerobacter brockii subsp.
finnii Ako-1]
Length = 274
Score = 38.6 bits (89), Expect = 0.60, Method: Composition-based stats.
Identities = 15/87 (17%), Positives = 36/87 (41%), Gaps = 7/87 (8%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
+ I M+ I E E ++ S +G++G V+G++ ++ +
Sbjct: 127 MELIKTTMENKIYVEDMEAKKEAGIFESAGGYAPTMGLIGTVMGLVQALGNL----TEPD 182
Query: 170 VSIPGIIESLISILLGLCVSIPSSIAY 196
P + + I+ L G +I +++ +
Sbjct: 183 KLGPAVAVAFITTLYG---AILANVFF 206
>gi|209694504|ref|YP_002262432.1| flagellar motor protein PomA [Aliivibrio salmonicida LFI1238]
gi|208008455|emb|CAQ78621.1| sodium-driven polar flagellar protein MotA [Aliivibrio salmonicida
LFI1238]
Length = 254
Score = 38.6 bits (89), Expect = 0.60, Method: Composition-based stats.
Identities = 11/75 (14%), Positives = 31/75 (41%), Gaps = 4/75 (5%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ + + IA E + + + +G++G ++G++G ++ +
Sbjct: 119 EVVKATLQKDIALTNERHEKGIGVFTAFGDVAPAMGMIGTLIGLVGMLSNM----DDPKS 174
Query: 171 SIPGIIESLISILLG 185
P + +L++ L G
Sbjct: 175 IGPAMAVALLTTLYG 189
>gi|269796388|ref|YP_003315843.1| flagellar motor component [Sanguibacter keddieii DSM 10542]
gi|269098573|gb|ACZ23009.1| flagellar motor component [Sanguibacter keddieii DSM 10542]
Length = 253
Score = 38.6 bits (89), Expect = 0.61, Method: Composition-based stats.
Identities = 28/160 (17%), Positives = 60/160 (37%), Gaps = 9/160 (5%)
Query: 65 SGQSLETVCKSLKNHHNIGLAAIFMSAMS---EWKKSCDKGARSPIGIQDRIDRMMDVAI 121
S S+ET+ GL ++ +A E+ +S + A +D + +++ I
Sbjct: 69 SADSIETIVSLADRARREGLLSLEDAARDIDDEFLRSGLRSAIDGTDPED-LRTLLEDRI 127
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLIS 181
+ F M +GI+G V+ ++ +++ SN I + ++
Sbjct: 128 HSKRVSDKTSYKFFHDMGGYAPTIGIVGTVISLVHVLENL----SNPDELGHMIAAAFVA 183
Query: 182 ILLGLCVS-IPSSIAYNKFIEDSKKFAMQMEGFANEFSAI 220
L G+ + + N+ S+ QME ++
Sbjct: 184 TLWGILSANVLWLPIGNRLKRLSELECSQMEIVLEGLLSV 223
>gi|167038134|ref|YP_001665712.1| MotA/TolQ/ExbB proton channel [Thermoanaerobacter pseudethanolicus
ATCC 33223]
gi|167039155|ref|YP_001662140.1| MotA/TolQ/ExbB proton channel [Thermoanaerobacter sp. X514]
gi|166853395|gb|ABY91804.1| MotA/TolQ/ExbB proton channel [Thermoanaerobacter sp. X514]
gi|166856968|gb|ABY95376.1| MotA/TolQ/ExbB proton channel [Thermoanaerobacter pseudethanolicus
ATCC 33223]
Length = 272
Score = 38.6 bits (89), Expect = 0.63, Method: Composition-based stats.
Identities = 15/87 (17%), Positives = 36/87 (41%), Gaps = 7/87 (8%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
+ I M+ I E E ++ S +G++G V+G++ ++ +
Sbjct: 125 MELIKTTMENKIYVEDMEAKKEAGIFESAGGYAPTMGLIGTVMGLVQALGNL----TEPD 180
Query: 170 VSIPGIIESLISILLGLCVSIPSSIAY 196
P + + I+ L G +I +++ +
Sbjct: 181 KLGPAVAVAFITTLYG---AILANVFF 204
>gi|289548705|ref|YP_003473693.1| MotA/TolQ/ExbB proton channel [Thermocrinis albus DSM 14484]
gi|289182322|gb|ADC89566.1| MotA/TolQ/ExbB proton channel [Thermocrinis albus DSM 14484]
Length = 249
Score = 38.6 bits (89), Expect = 0.63, Method: Composition-based stats.
Identities = 14/72 (19%), Positives = 33/72 (45%), Gaps = 4/72 (5%)
Query: 115 RMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG 174
++ +A+ EE+ + + + + + G++GAV G+M QS+ G
Sbjct: 126 ESLETEVAKREEELEIAVEYWKNAAESAPTFGLVGAVFGLMKALQSLDNAQE----LAHG 181
Query: 175 IIESLISILLGL 186
I + ++ + G+
Sbjct: 182 ISAAFVATVYGI 193
>gi|241763662|ref|ZP_04761712.1| MotA/TolQ/ExbB proton channel [Acidovorax delafieldii 2AN]
gi|241367137|gb|EER61503.1| MotA/TolQ/ExbB proton channel [Acidovorax delafieldii 2AN]
Length = 286
Score = 38.6 bits (89), Expect = 0.63, Method: Composition-based stats.
Identities = 24/108 (22%), Positives = 41/108 (37%), Gaps = 9/108 (8%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI 172
I+ +MD I +E ++ L ++ A GI+ AVLG++ + V
Sbjct: 145 IESLMDSEIETHHQEAHAPVAALTRLAGALPAFGIVAAVLGVVNT---MGSVGQPPSVLG 201
Query: 173 PGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAI 220
I +L+ LG+ +AY + + E A E I
Sbjct: 202 GMIASALVGTFLGI------LLAYGAVEPLAGLLEQKAEDAAKELHCI 243
>gi|218899668|ref|YP_002448079.1| chemotaxis protein MotA [Bacillus cereus G9842]
gi|218543144|gb|ACK95538.1| chemotaxis protein MotA [Bacillus cereus G9842]
Length = 264
Score = 38.6 bits (89), Expect = 0.63, Method: Composition-based stats.
Identities = 12/95 (12%), Positives = 40/95 (42%), Gaps = 7/95 (7%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ ++++++ + E + + + +G+LGAV+G++ ++ ++
Sbjct: 124 EDLEQILESELEAIEERHAKGAAIFSQAGTYAPTLGVLGAVIGLVAALGNL----TDIEK 179
Query: 171 SIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKK 205
I + I+ + G+ + ++ F K+
Sbjct: 180 LGHAISGAFIATIFGIFSG---YVLWHPFANKLKQ 211
>gi|298371977|ref|ZP_06981967.1| MotA/TolQ/ExbB proton channel family domain protein [Bacteroidetes
oral taxon 274 str. F0058]
gi|298274881|gb|EFI16432.1| MotA/TolQ/ExbB proton channel family domain protein [Bacteroidetes
oral taxon 274 str. F0058]
Length = 202
Score = 38.6 bits (89), Expect = 0.64, Method: Composition-based stats.
Identities = 35/217 (16%), Positives = 77/217 (35%), Gaps = 29/217 (13%)
Query: 17 FMQMGLAVKCIITLLFIF--SILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCK 74
++ GL V I+ LL+ F SIL + + + + ++ +E +
Sbjct: 10 WISNGLLVPVIVGLLYFFVNSILLLGIFFNQYLTHSKQTKLLKKTLDSLR-ADDMEKLKV 68
Query: 75 SLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSF 134
+ + K+ +R++ R E+ +
Sbjct: 69 EAGKLPQSNFTGFLHNIIEAPSKAYS-------------NRLLADYEVRADAELGKY--- 112
Query: 135 LGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVSIPSS 193
++ G ++G++G ++ M +AG + +V S+ + + + ++GL V +
Sbjct: 113 -KLLTKFGPILGLMGTLIPMGPA---LAGLATGDVASMAYNMQIAFATTVVGLFVG---A 165
Query: 194 IAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
I Y + F ++ EF A L Q N +
Sbjct: 166 IGYVLLQIKQRWFVAELADL--EFIADLKEQNTSNTT 200
>gi|258647210|ref|ZP_05734679.1| MotA/TolQ/ExbB proton channel family domain protein [Prevotella
tannerae ATCC 51259]
gi|260852956|gb|EEX72825.1| MotA/TolQ/ExbB proton channel family domain protein [Prevotella
tannerae ATCC 51259]
Length = 199
Score = 38.6 bits (89), Expect = 0.64, Method: Composition-based stats.
Identities = 16/173 (9%), Positives = 61/173 (35%), Gaps = 26/173 (15%)
Query: 26 CIITLLF----IFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHN 81
++ +L + I S + ++ + + + +SL+ V + L ++
Sbjct: 20 IVLLILLFGRALLLIGS---FFGQYLSVRKAQATVNAALKDL-TPESLDAVAEKLPHNST 75
Query: 82 IGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSA 141
+ ++ + + + + I+ + ++L+ +++
Sbjct: 76 APVICSLLAILEHRDQPAE----------------VQRLISDYELLMEKELNAPKTLAKM 119
Query: 142 GLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSI 194
G ++G++G ++ M ++ + + + + ++GL + I
Sbjct: 120 GPMLGLMGTLIPMGPALVGLS--KGDIASMAYNMQVAFATTVVGLFAAAIGVI 170
>gi|150398936|ref|YP_001322703.1| MotA/TolQ/ExbB proton channel [Methanococcus vannielii SB]
gi|150011639|gb|ABR54091.1| MotA/TolQ/ExbB proton channel [Methanococcus vannielii SB]
Length = 213
Score = 38.6 bits (89), Expect = 0.64, Method: Composition-based stats.
Identities = 25/198 (12%), Positives = 71/198 (35%), Gaps = 9/198 (4%)
Query: 27 IITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAA 86
+I +L IF I S + + + + + Q + S + + L++ + + +
Sbjct: 25 VIVVLLIFMIYSVMLFGEFMAEYSGRTKINSKELQKIITEISNKRSNEVLESINKLNIPK 84
Query: 87 IFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVG 146
++ + E D + +++ R + + +E + + L ++ G G
Sbjct: 85 SYIKIIEE----SDLNESADHKLREANARTI---LEKEELRLEKTLEKTDFITRLGPTFG 137
Query: 147 ILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKF 206
++G ++ M ++ ++ + II + + ++GL + ++
Sbjct: 138 LMGTLIPMGPGLAALGAGDVTSLANA--IIIAFDTTVVGLAAGGICYVISKIRRRWYEEQ 195
Query: 207 AMQMEGFANEFSAILSRQ 224
+E F L
Sbjct: 196 MYNLESILESFLEALKND 213
>gi|329904711|ref|ZP_08273912.1| Flagellar motor rotation protein MotA [Oxalobacteraceae bacterium
IMCC9480]
gi|327547855|gb|EGF32613.1| Flagellar motor rotation protein MotA [Oxalobacteraceae bacterium
IMCC9480]
Length = 246
Score = 38.6 bits (89), Expect = 0.65, Method: Composition-based stats.
Identities = 29/180 (16%), Positives = 66/180 (36%), Gaps = 12/180 (6%)
Query: 51 TLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCD-----KGARS 105
T++R R F + L + + + + ++ + + D KG R
Sbjct: 55 TVKRGVRMAAAAFRNQPDLHRLHAADVAMWSQTARREGLLSLERFMDNSDDPFITKGLRL 114
Query: 106 PIGIQD--RIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAG 163
D ++ ++ + I+ + + +GILGAVLG++ +++
Sbjct: 115 LTDGIDPYKLREILGIEISSYETRERKAARIWDAAGGYAPTIGILGAVLGLIHVMENL-- 172
Query: 164 YYSNNVVSIPGIIESLISILLGLCVSIPSSI-AYNKFIEDSKKFAMQMEGFANEFSAILS 222
S+ GI + ++ + G+ ++ + K ++E A+ F I S
Sbjct: 173 --SDPSRLGAGIAVAFVATIYGVGLANLVFLPIGGKLKTAVNDEVTRLEMLADAFCCIAS 230
>gi|307944456|ref|ZP_07659796.1| chemotaxis protein PomA [Roseibium sp. TrichSKD4]
gi|307772205|gb|EFO31426.1| chemotaxis protein PomA [Roseibium sp. TrichSKD4]
Length = 255
Score = 38.6 bits (89), Expect = 0.65, Method: Composition-based stats.
Identities = 11/75 (14%), Positives = 32/75 (42%), Gaps = 4/75 (5%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ I M+ L ++E + ++ + G++G ++G++ ++ +
Sbjct: 120 EFIKDSMERERDLNLTRLSEGKRVMKALGDSAPAFGMIGTLVGLVQMLANM----DDPAA 175
Query: 171 SIPGIIESLISILLG 185
P + +L++ L G
Sbjct: 176 IGPSMAVALLTTLYG 190
>gi|283853399|ref|ZP_06370645.1| MotA/TolQ/ExbB proton channel [Desulfovibrio sp. FW1012B]
gi|283571212|gb|EFC19226.1| MotA/TolQ/ExbB proton channel [Desulfovibrio sp. FW1012B]
Length = 264
Score = 38.6 bits (89), Expect = 0.65, Method: Composition-based stats.
Identities = 18/119 (15%), Positives = 47/119 (39%), Gaps = 4/119 (3%)
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
+ + I L +E+ +S + ++ I ++D I + ++
Sbjct: 83 EIARHASTRGTIHLEKALPGIENEFLQSAIQMLVDGYS-REEIQEILDTRIEQTYQQELS 141
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVS 189
+M+ G++G ++G++G QS++ N + +L + L G+ ++
Sbjct: 142 SAGIYRTMAKLAPAYGMIGTLIGLIGMMQSMSVGLGN---LGAHMAVALTTTLYGILLA 197
>gi|288960026|ref|YP_003450366.1| chemotaxis protein [Azospirillum sp. B510]
gi|288912334|dbj|BAI73822.1| chemotaxis protein [Azospirillum sp. B510]
Length = 311
Score = 38.6 bits (89), Expect = 0.66, Method: Composition-based stats.
Identities = 17/138 (12%), Positives = 49/138 (35%), Gaps = 7/138 (5%)
Query: 72 VCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEK 131
+ ++ + L + +E + D I+RM+ + +
Sbjct: 131 LAEAARRAGPETLRNVLPELRAEPFLHRSVTLITEGLPPDAIERMLTGEVEATAGGHGKS 190
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIP 191
L S +G++G ++G++ S+ S+ P + +L++ G ++
Sbjct: 191 AGVLRRASEVAPAMGLIGTLVGLVQMLGSL----SDPSAIGPAMALALLTTFYG---AVL 243
Query: 192 SSIAYNKFIEDSKKFAMQ 209
++ + ++ A +
Sbjct: 244 GNVVLSPLAAKVERAAEE 261
>gi|157376458|ref|YP_001475058.1| flagellar motor protein PomA [Shewanella sediminis HAW-EB3]
gi|157318832|gb|ABV37930.1| MotA/TolQ/ExbB proton channel [Shewanella sediminis HAW-EB3]
Length = 255
Score = 38.6 bits (89), Expect = 0.67, Method: Composition-based stats.
Identities = 13/79 (16%), Positives = 34/79 (43%), Gaps = 4/79 (5%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
D + ++ IA E +S ++ +G++G ++G++ ++ +
Sbjct: 119 DVVRDALEKDIALTEERHKLGVSIFQALGDVAPAMGMIGTLIGLVAMLSNM----DDPKS 174
Query: 171 SIPGIIESLISILLGLCVS 189
P + +L++ L G V+
Sbjct: 175 IGPAMAVALLTTLYGAVVA 193
>gi|148242378|ref|YP_001227535.1| biopolymer transport protein [Synechococcus sp. RCC307]
gi|147850688|emb|CAK28182.1| Possible biopolymer transport protein [Synechococcus sp. RCC307]
Length = 188
Score = 38.6 bits (89), Expect = 0.67, Method: Composition-based stats.
Identities = 35/197 (17%), Positives = 74/197 (37%), Gaps = 27/197 (13%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITL----RRQFREFEQLFWSGQSLETVCKSLKNHHNIG 83
+ L + SI +V + + + L R++R E G S +
Sbjct: 1 MVPLLLLSIAVAAVGVDRLRFWRRLGSPTDRRWRLVENQLLEGSS----------PTGVP 50
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
++ M + + AR + + + + + L + ++ G
Sbjct: 51 TSSPVGHLMRQLTAADGPAARQLE---------LQLILQSQAAAMARGERILEAAAALGP 101
Query: 144 LVGILGAVLGMMGFFQSIA---GYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFI 200
L+G+LG V G++ F ++ G S + V++ GI E L+S G+ V++ + + +
Sbjct: 102 LLGLLGTVTGLIRTFAALGREVGAASMDRVAL-GISEVLVSTATGILVALFAMVVLKINM 160
Query: 201 EDSKKFAMQMEGFANEF 217
+ +E A F
Sbjct: 161 AYRSSYLALLERLALSF 177
>gi|84394352|ref|ZP_00993073.1| flagellar motor protein [Vibrio splendidus 12B01]
gi|84375011|gb|EAP91937.1| flagellar motor protein [Vibrio splendidus 12B01]
Length = 254
Score = 38.6 bits (89), Expect = 0.67, Method: Composition-based stats.
Identities = 11/75 (14%), Positives = 29/75 (38%), Gaps = 4/75 (5%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
D + + IA E + + +G++G ++G++ ++ +
Sbjct: 119 DVVRAALQKDIALTTERHEQGAKVFSAFGDVAPAMGMIGTLVGLVAMLSNM----DDPKA 174
Query: 171 SIPGIIESLISILLG 185
P + +L++ L G
Sbjct: 175 IGPAMAVALLTTLYG 189
>gi|154253327|ref|YP_001414151.1| MotA/TolQ/ExbB proton channel [Parvibaculum lavamentivorans DS-1]
gi|154157277|gb|ABS64494.1| MotA/TolQ/ExbB proton channel [Parvibaculum lavamentivorans DS-1]
Length = 312
Score = 38.6 bits (89), Expect = 0.68, Method: Composition-based stats.
Identities = 22/108 (20%), Positives = 45/108 (41%), Gaps = 9/108 (8%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI 172
++ +MD + +E +S + +++ +GI+ AVLG++ SI V
Sbjct: 168 LESLMDEELETHHQERERIVSAMQALADGTPALGIVAAVLGVIKTMGSI---DQPPSVLG 224
Query: 173 PGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAI 220
I +L+ LG+ V+ Y F ++ E + F ++
Sbjct: 225 GLIGGALVGTFLGVFVA------YGFFGPMAQSLRNTYEAESKYFLSM 266
>gi|311992346|gb|ADQ26746.1| flagellar stator protein [Aeromonas hydrophila]
Length = 242
Score = 38.6 bits (89), Expect = 0.68, Method: Composition-based stats.
Identities = 20/129 (15%), Positives = 43/129 (33%), Gaps = 5/129 (3%)
Query: 61 QLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVA 120
L + L+ + + L E+ + + I D I +++
Sbjct: 67 DLVAQAERLQAWAVFARQQGLLALENQADQESDEFTRQGLTMIVDGVSIDD-IRMLLEAD 125
Query: 121 IARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLI 180
I E E +M +GI+GAV+G++ + GI + +
Sbjct: 126 IDIEQERNEHSARVFEAMGGYSPTIGIIGAVIGLIQAMFHL----EEPASLGAGIAVAFV 181
Query: 181 SILLGLCVS 189
+ + G+ +
Sbjct: 182 ATIYGVGFA 190
>gi|228941690|ref|ZP_04104237.1| hypothetical protein bthur0008_43260 [Bacillus thuringiensis
serovar berliner ATCC 10792]
gi|228974616|ref|ZP_04135182.1| hypothetical protein bthur0003_43690 [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228981211|ref|ZP_04141511.1| hypothetical protein bthur0002_43720 [Bacillus thuringiensis Bt407]
gi|228778411|gb|EEM26678.1| hypothetical protein bthur0002_43720 [Bacillus thuringiensis Bt407]
gi|228785019|gb|EEM33032.1| hypothetical protein bthur0003_43690 [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228817902|gb|EEM63980.1| hypothetical protein bthur0008_43260 [Bacillus thuringiensis
serovar berliner ATCC 10792]
Length = 266
Score = 38.6 bits (89), Expect = 0.68, Method: Composition-based stats.
Identities = 12/95 (12%), Positives = 40/95 (42%), Gaps = 7/95 (7%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ ++++++ + E + + + +G+LGAV+G++ ++ ++
Sbjct: 126 EDLEQILESELEAIEERHAKGAAIFSQAGTYAPTLGVLGAVIGLVAALGNL----TDIEK 181
Query: 171 SIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKK 205
I + I+ + G+ + ++ F K+
Sbjct: 182 LGHAISGAFIATIFGIFSG---YVLWHPFANKLKQ 213
>gi|88704265|ref|ZP_01101979.1| Chemotaxis pomA protein [Congregibacter litoralis KT71]
gi|88701316|gb|EAQ98421.1| Chemotaxis pomA protein [Congregibacter litoralis KT71]
Length = 252
Score = 38.6 bits (89), Expect = 0.69, Method: Composition-based stats.
Identities = 9/80 (11%), Positives = 36/80 (45%), Gaps = 4/80 (5%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
++ + ++ + + +E + + + +G++G ++G++ ++ S+
Sbjct: 118 REVVSTVLSKDMQQTIERHSWGAKVFSATADVAPAMGMIGTLIGLVQMLSNM----SDPK 173
Query: 170 VSIPGIIESLISILLGLCVS 189
P + +L++ L G ++
Sbjct: 174 SIGPAMAVALLTTLYGAMLA 193
>gi|75761763|ref|ZP_00741701.1| Chemotaxis motA protein [Bacillus thuringiensis serovar israelensis
ATCC 35646]
gi|228903030|ref|ZP_04067169.1| hypothetical protein bthur0014_41970 [Bacillus thuringiensis IBL
4222]
gi|228910336|ref|ZP_04074152.1| hypothetical protein bthur0013_44830 [Bacillus thuringiensis IBL
200]
gi|228967606|ref|ZP_04128629.1| hypothetical protein bthur0004_44000 [Bacillus thuringiensis
serovar sotto str. T04001]
gi|74490748|gb|EAO54026.1| Chemotaxis motA protein [Bacillus thuringiensis serovar israelensis
ATCC 35646]
gi|228792097|gb|EEM39676.1| hypothetical protein bthur0004_44000 [Bacillus thuringiensis
serovar sotto str. T04001]
gi|228849288|gb|EEM94126.1| hypothetical protein bthur0013_44830 [Bacillus thuringiensis IBL
200]
gi|228856623|gb|EEN01144.1| hypothetical protein bthur0014_41970 [Bacillus thuringiensis IBL
4222]
Length = 266
Score = 38.6 bits (89), Expect = 0.69, Method: Composition-based stats.
Identities = 12/95 (12%), Positives = 40/95 (42%), Gaps = 7/95 (7%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ ++++++ + E + + + +G+LGAV+G++ ++ ++
Sbjct: 126 EDLEQILESELEAIEERHAKGAAIFSQAGTYAPTLGVLGAVIGLVAALGNL----TDIEK 181
Query: 171 SIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKK 205
I + I+ + G+ + ++ F K+
Sbjct: 182 LGHAISGAFIATIFGIFSG---YVLWHPFANKLKQ 213
>gi|24216276|ref|NP_713757.1| endoflagellar motor protein A [Leptospira interrogans serovar Lai
str. 56601]
gi|45656520|ref|YP_000606.1| motility protein A [Leptospira interrogans serovar Copenhageni str.
Fiocruz L1-130]
gi|24197542|gb|AAN50775.1| endoflagellar motor protein A [Leptospira interrogans serovar Lai
str. 56601]
gi|45599755|gb|AAS69243.1| motility protein A [Leptospira interrogans serovar Copenhageni str.
Fiocruz L1-130]
Length = 260
Score = 38.6 bits (89), Expect = 0.69, Method: Composition-based stats.
Identities = 15/124 (12%), Positives = 46/124 (37%), Gaps = 8/124 (6%)
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQ------DRIDRMMDVAI 121
L + K+L + ++ + + D+ R I + + + +M+ +
Sbjct: 73 DLIELIKTLVSFSEKARREGLLALEDDVNELPDEFLRKGITLVVDGTDPELVRNIMETEM 132
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLIS 181
++ + + G++G ++G++ +++ + G+ +LI+
Sbjct: 133 GNIASRHNNGKAWWENWGALAPAFGMIGTLIGLVQMLKNLGSG--DPSAIGTGMAAALIT 190
Query: 182 ILLG 185
L G
Sbjct: 191 TLYG 194
>gi|326791533|ref|YP_004309354.1| MotA/TolQ/ExbB proton channel [Clostridium lentocellum DSM 5427]
gi|326542297|gb|ADZ84156.1| MotA/TolQ/ExbB proton channel [Clostridium lentocellum DSM 5427]
Length = 260
Score = 38.6 bits (89), Expect = 0.70, Method: Composition-based stats.
Identities = 19/153 (12%), Positives = 54/153 (35%), Gaps = 6/153 (3%)
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ + S + + L I M + + + +++ IA
Sbjct: 81 INELALSARKEGLLALEEIAQ-GMDDPFLQKGILLIVDGTDAELLRSILETEIAFVENRH 139
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCV 188
+ F S++ G G++G ++G++ ++ ++ P + +L++ G +
Sbjct: 140 KDNQKFWDSIAELGPAWGMIGTLIGLIIMLDNL----NDPSTLGPKMAVALVTTFYGSMI 195
Query: 189 S-IPSSIAYNKFIEDSKKFAMQMEGFANEFSAI 220
+ + ++ NK S + + +I
Sbjct: 196 ANLVATPISNKLSLRSNDEILHKQVMVEGLLSI 228
>gi|253577344|ref|ZP_04854661.1| MotA/TolQ/ExbB proton channel [Paenibacillus sp. oral taxon 786
str. D14]
gi|251843244|gb|EES71275.1| MotA/TolQ/ExbB proton channel [Paenibacillus sp. oral taxon 786
str. D14]
Length = 267
Score = 38.6 bits (89), Expect = 0.71, Method: Composition-based stats.
Identities = 15/98 (15%), Positives = 36/98 (36%), Gaps = 7/98 (7%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
Q+ + ++ IA E +G+LGAV+G++ + S+
Sbjct: 123 QEFVQDVLTEDIAATEERHKAGALMFSQAGMYAPTLGVLGAVVGLIAALSDM----SDME 178
Query: 170 VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFA 207
+ I + I+ + G+ + ++ K+ +
Sbjct: 179 ILAHAISGAFIATVFGIFTG---YVLWHPIANKLKRLS 213
>gi|229072016|ref|ZP_04205226.1| hypothetical protein bcere0025_41830 [Bacillus cereus F65185]
gi|228711175|gb|EEL63140.1| hypothetical protein bcere0025_41830 [Bacillus cereus F65185]
Length = 266
Score = 38.6 bits (89), Expect = 0.72, Method: Composition-based stats.
Identities = 12/95 (12%), Positives = 40/95 (42%), Gaps = 7/95 (7%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ ++++++ + E + + + +G+LGAV+G++ ++ ++
Sbjct: 126 EDLEQILESELEAIEERHAKGAAIFSQAGTYAPTLGVLGAVIGLVAALGNL----TDIEK 181
Query: 171 SIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKK 205
I + I+ + G+ + ++ F K+
Sbjct: 182 LGHAISGAFIATIFGIFSG---YVLWHPFANKLKQ 213
>gi|254474842|ref|ZP_05088228.1| chemotaxis protein MotA [Ruegeria sp. R11]
gi|214029085|gb|EEB69920.1| chemotaxis protein MotA [Ruegeria sp. R11]
Length = 289
Score = 38.6 bits (89), Expect = 0.72, Method: Composition-based stats.
Identities = 17/93 (18%), Positives = 39/93 (41%), Gaps = 7/93 (7%)
Query: 97 KSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMG 156
+S P +++ +++ ++ + + L S++ +GI+ AVLG++
Sbjct: 132 RSASMNYDDPHQVEEVLEKRIEANLHHAMHSSHA----LQSLADGLPALGIVAAVLGIIK 187
Query: 157 FFQSIAGYYSNNVVSIPGIIESLISILLGLCVS 189
SI V I +L+ LG+ ++
Sbjct: 188 TMGSI---DQPPEVLGKLIGGALVGTFLGVFLA 217
>gi|209695231|ref|YP_002263160.1| TonB system transport protein ExbB1 [Aliivibrio salmonicida
LFI1238]
gi|208009183|emb|CAQ79437.1| TonB system transport protein ExbB1 [Aliivibrio salmonicida
LFI1238]
Length = 226
Score = 38.6 bits (89), Expect = 0.72, Method: Composition-based stats.
Identities = 34/209 (16%), Positives = 83/209 (39%), Gaps = 28/209 (13%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETV 72
L+ Q+G+ LFI S+L+ ++ ++ ++ LF SG S +
Sbjct: 4 FINLYSQLGMMA----LPLFICSVLTLILLAERILHL------------LFSSGCSHRKI 47
Query: 73 ---CKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIA-----RE 124
L + + + I ++ S +++ + + D+ + +A +
Sbjct: 48 ALSYNKLNKNDDKEINNIIVTLNS--QRALSAKGNAMLLAHRHFDKALREDVAGLWLQEK 105
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV--VSIPGIIESLISI 182
++ L L + L+G+LG VLG++ F+ +A + + G+ ++ +
Sbjct: 106 RHQLRSGLRLLSLIGVITPLLGLLGTVLGLIDMFKEVAATTGSITPNILADGLGFAMRTT 165
Query: 183 LLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
+GL +++P+ + ++E
Sbjct: 166 AIGLIIAVPAISGSQLLGLWADNILSKLE 194
>gi|224826336|ref|ZP_03699438.1| MotA/TolQ/ExbB proton channel [Lutiella nitroferrum 2002]
gi|224601437|gb|EEG07618.1| MotA/TolQ/ExbB proton channel [Lutiella nitroferrum 2002]
Length = 249
Score = 38.6 bits (89), Expect = 0.73, Method: Composition-based stats.
Identities = 16/79 (20%), Positives = 35/79 (44%), Gaps = 4/79 (5%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ + +M+V I+ + S +GILGAVLG++ +++ S+
Sbjct: 122 ETLRSVMEVEISMFEHARRQSTRIWESAGGYAPTMGILGAVLGLIHVMENL----SDPSK 177
Query: 171 SIPGIIESLISILLGLCVS 189
GI + ++ + G+ +
Sbjct: 178 LGSGIAVAFVATIYGVGSA 196
>gi|117619934|ref|YP_855926.1| chemotaxis protein MotA [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
gi|117561341|gb|ABK38289.1| chemotaxis protein MotA [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
Length = 243
Score = 38.6 bits (89), Expect = 0.74, Method: Composition-based stats.
Identities = 20/129 (15%), Positives = 43/129 (33%), Gaps = 5/129 (3%)
Query: 61 QLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVA 120
L + L+ + + L E+ + + I D I +++
Sbjct: 68 DLVAQAERLQAWAVFARQQGLLALENQADQESDEFTRQGLTMIVDGVSIDD-IRMLLEAD 126
Query: 121 IARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLI 180
I E E +M +GI+GAV+G++ + GI + +
Sbjct: 127 IDIEQERNEHSARVFEAMGGYSPTIGIIGAVIGLIQAMFHL----EEPASLGAGIAVAFV 182
Query: 181 SILLGLCVS 189
+ + G+ +
Sbjct: 183 ATIYGVGFA 191
>gi|225849648|ref|YP_002729882.1| chemotaxis protein PomA [Persephonella marina EX-H1]
gi|225646132|gb|ACO04318.1| chemotaxis protein PomA [Persephonella marina EX-H1]
Length = 253
Score = 38.6 bits (89), Expect = 0.74, Method: Composition-based stats.
Identities = 12/80 (15%), Positives = 40/80 (50%), Gaps = 4/80 (5%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
+ I D ++ + +E++ +++ ++ G++G ++G++ Q++ ++
Sbjct: 122 IEEIRSNADSSLMKIEQELSTEVAVWETLGELFPAFGMIGTLIGLIQMLQNL----NDPS 177
Query: 170 VSIPGIIESLISILLGLCVS 189
PG+ ++I+ L G ++
Sbjct: 178 ALGPGMAVAMITTLYGAILA 197
>gi|328952082|ref|YP_004369416.1| MotA/TolQ/ExbB proton channel [Desulfobacca acetoxidans DSM 11109]
gi|328452406|gb|AEB08235.1| MotA/TolQ/ExbB proton channel [Desulfobacca acetoxidans DSM 11109]
Length = 201
Score = 38.6 bits (89), Expect = 0.75, Method: Composition-based stats.
Identities = 16/133 (12%), Positives = 49/133 (36%), Gaps = 10/133 (7%)
Query: 63 FWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIA 122
FW S + + + G ++ ++++ D + +D ++ +
Sbjct: 31 FWIVISFGSFLREYLDRRQGGSRSL-----QQYRRMLDPQLITRSA---NLDLELEKRLQ 82
Query: 123 RELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISI 182
E+ + L + G VG++G ++ M ++A + ++ + +
Sbjct: 83 EAELELIKGLDKIRFAIRVGPAVGLMGTLIPMGISLAALA--QGDMPKMAGSMVTAFTAT 140
Query: 183 LLGLCVSIPSSIA 195
++GL + + +
Sbjct: 141 VVGLACGVAAYLM 153
>gi|304317568|ref|YP_003852713.1| MotA/TolQ/ExbB proton channel [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302779070|gb|ADL69629.1| MotA/TolQ/ExbB proton channel [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 270
Score = 38.6 bits (89), Expect = 0.76, Method: Composition-based stats.
Identities = 15/80 (18%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
+ I M+ I E + + ++ S + +GI+G V+G++ +++
Sbjct: 125 IELIKTTMENRIYIEDKALKKEASMFEAAGGYSPTMGIIGTVMGLVHVLGNLSQ----PD 180
Query: 170 VSIPGIIESLISILLGLCVS 189
P I + I+ L G+ ++
Sbjct: 181 KLGPSIAVAFIATLYGVSMA 200
>gi|304311122|ref|YP_003810720.1| Flagellar motor protein MotA [gamma proteobacterium HdN1]
gi|301796855|emb|CBL45067.1| Flagellar motor protein MotA [gamma proteobacterium HdN1]
Length = 246
Score = 38.6 bits (89), Expect = 0.76, Method: Composition-based stats.
Identities = 16/77 (20%), Positives = 35/77 (45%), Gaps = 4/77 (5%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI 172
I +M+V + E + +M +GILGAV+G++ ++A +
Sbjct: 124 IRSVMEVELFTRQERDLQSARVFEAMGGYSPTIGILGAVMGLIHVMGNLA----DPSKLG 179
Query: 173 PGIIESLISILLGLCVS 189
GI + ++ + G+ ++
Sbjct: 180 AGIATAFVATIYGVGLA 196
>gi|116329295|ref|YP_799015.1| endoflagellar motor protein [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
gi|116330098|ref|YP_799816.1| endoflagellar motor protein [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
gi|116122039|gb|ABJ80082.1| Endoflagellar motor protein [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
gi|116123787|gb|ABJ75058.1| Endoflagellar motor protein [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
Length = 260
Score = 38.6 bits (89), Expect = 0.76, Method: Composition-based stats.
Identities = 15/124 (12%), Positives = 46/124 (37%), Gaps = 8/124 (6%)
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQ------DRIDRMMDVAI 121
L + K+L + ++ + + D+ R I + + + +M+ +
Sbjct: 73 DLIELIKTLVSFSEKARREGLLALEDDVNELPDEFLRKGITLVVDGTDPELVRNIMETEM 132
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLIS 181
++ + + G++G ++G++ +++ + G+ +LI+
Sbjct: 133 GNIASRHNNGKAWWENWGALAPAFGMIGTLIGLVQMLKNLGSG--DPSAIGTGMAAALIT 190
Query: 182 ILLG 185
L G
Sbjct: 191 TLYG 194
>gi|194365635|ref|YP_002028245.1| flagellar motor protein [Stenotrophomonas maltophilia R551-3]
gi|194348439|gb|ACF51562.1| MotA/TolQ/ExbB proton channel [Stenotrophomonas maltophilia R551-3]
Length = 246
Score = 38.2 bits (88), Expect = 0.77, Method: Composition-based stats.
Identities = 33/198 (16%), Positives = 74/198 (37%), Gaps = 24/198 (12%)
Query: 11 ISIFALFMQ-MGLAVKCIITLLFIFSILS---WSVIIQKSVNFITLRRQFREFEQLF--- 63
+S+ LF+ L I+ + S+ S + ++I +V I L F+ F
Sbjct: 4 LSLIGLFLALASLVGGSILKGAGLASLWSPAAFVIVIVGTVAAILLHTSPAVFKHAFKIV 63
Query: 64 -WSGQ----SLETVCKSLKNHHNI-------GLAAIFMSAMSEWKKSCDKGARSPIGIQD 111
W + + + + NI GL A + + + + + +
Sbjct: 64 RWVVRPPHSDRRELIQQIVEWSNIARRQGLLGLEAQVEAQQDPFLRKGLQLLVDGVE-PE 122
Query: 112 RIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVS 171
I M+++ + + + +M +GI+GAVLG++ +++A +
Sbjct: 123 SIRHMLEIELGSQEHQDQAGAKVFEAMGIYAPTLGIIGAVLGLIAVMKNLA----DPSKL 178
Query: 172 IPGIIESLISILLGLCVS 189
GI + + + G+ +
Sbjct: 179 GHGIAAAFTATIYGIASA 196
>gi|292669790|ref|ZP_06603216.1| chemotaxis protein MotA [Selenomonas noxia ATCC 43541]
gi|292648587|gb|EFF66559.1| chemotaxis protein MotA [Selenomonas noxia ATCC 43541]
Length = 268
Score = 38.2 bits (88), Expect = 0.78, Method: Composition-based stats.
Identities = 18/99 (18%), Positives = 41/99 (41%), Gaps = 7/99 (7%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
D + ++D +A E E S + +G+LGAV+G++ ++ ++
Sbjct: 133 DFVGDVLDAELAIMQERHAEGRSMFTQAGTYAPTLGVLGAVVGLIAALGNL----NDIDK 188
Query: 171 SIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQ 209
I + ++ +LG+ + ++ F K + Q
Sbjct: 189 LGHSIAAAFVATILGIFTG---YVLWHPFANKLKIMSEQ 224
>gi|126734116|ref|ZP_01749863.1| chemotaxis MotA protein [Roseobacter sp. CCS2]
gi|126716982|gb|EBA13846.1| chemotaxis MotA protein [Roseobacter sp. CCS2]
Length = 289
Score = 38.2 bits (88), Expect = 0.79, Method: Composition-based stats.
Identities = 19/144 (13%), Positives = 52/144 (36%), Gaps = 10/144 (6%)
Query: 46 SVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARS 105
+ + + + T+ + I A ++ + + +S
Sbjct: 84 LFELLRVAKTNPVALESHIEAPDTSTIF---GKYPKILDDAEAIALICDTLRSASMNYDD 140
Query: 106 PIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYY 165
P +++ +++ ++ + ++ L ++ +GI+ AVLG++ SI
Sbjct: 141 PHQVEEILEKRIEATLHHKMHSTHA----LQVVADGLPALGIVAAVLGVIKTMASI---D 193
Query: 166 SNNVVSIPGIIESLISILLGLCVS 189
V I +L+ LG+ ++
Sbjct: 194 QPPEVLGKLIGGALVGTFLGVFLA 217
>gi|288561301|ref|YP_003424787.1| MotA/TolQ/ExbB proton channel family protein [Methanobrevibacter
ruminantium M1]
gi|288544011|gb|ADC47895.1| MotA/TolQ/ExbB proton channel family protein [Methanobrevibacter
ruminantium M1]
Length = 214
Score = 38.2 bits (88), Expect = 0.80, Method: Composition-based stats.
Identities = 21/156 (13%), Positives = 58/156 (37%), Gaps = 4/156 (2%)
Query: 70 ETVCKSLKNHHNIGLAAIFMSAM--SEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+ + ++ L I +A K+ ARS +D + + + I E +
Sbjct: 61 DLIYAISRSEDVTELENILKNARIPKNQKRVLINIARSGELKKDSREALAEKLIENEEDI 120
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLC 187
I +KL ++ G +G++G ++ M ++ + + II + + ++G+
Sbjct: 121 IEKKLQKTDIVTKIGPTLGLMGTLIPMGPGLAALGSGDVTTLSNA--IIVAFDTTVVGIG 178
Query: 188 VSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSR 223
+ + +++ ++ + L+
Sbjct: 179 SGAVAYVVSKVRRRWYEQYLSNLDALSKAVLDRLNE 214
>gi|229917740|ref|YP_002886386.1| MotA/TolQ/ExbB proton channel [Exiguobacterium sp. AT1b]
gi|229469169|gb|ACQ70941.1| MotA/TolQ/ExbB proton channel [Exiguobacterium sp. AT1b]
Length = 260
Score = 38.2 bits (88), Expect = 0.81, Method: Composition-based stats.
Identities = 15/98 (15%), Positives = 36/98 (36%), Gaps = 7/98 (7%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
+ I +M I + + +G+LGAV+G++ + + S+
Sbjct: 122 SEYIAEVMSRDIENMEQRHKANADIFTQAGTYAPTLGVLGAVIGLIAALKDL----SDIE 177
Query: 170 VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFA 207
I + ++ L G+ + + F K+++
Sbjct: 178 KLGHAISAAFVATLFGIFTG---YVLWFPFANKLKQYS 212
>gi|302874599|ref|YP_003843232.1| MotA/TolQ/ExbB proton channel [Clostridium cellulovorans 743B]
gi|307690790|ref|ZP_07633236.1| chemotaxis MotA protein [Clostridium cellulovorans 743B]
gi|302577456|gb|ADL51468.1| MotA/TolQ/ExbB proton channel [Clostridium cellulovorans 743B]
Length = 268
Score = 38.2 bits (88), Expect = 0.82, Method: Composition-based stats.
Identities = 10/73 (13%), Positives = 32/73 (43%), Gaps = 4/73 (5%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI 172
I ++++ I + E +E ++ + ++ G++G ++G++ + +
Sbjct: 126 IKEILELEIDQMEERHSEGINLMKTLGDYAPAFGMVGTLIGLINMLAYL----DDPTTIA 181
Query: 173 PGIIESLISILLG 185
+ +LI+ G
Sbjct: 182 SSMAVALITTFYG 194
>gi|197337539|ref|YP_002157777.1| chemotaxis MotA protein [Vibrio fischeri MJ11]
gi|197314791|gb|ACH64240.1| chemotaxis MotA protein [Vibrio fischeri MJ11]
Length = 260
Score = 38.2 bits (88), Expect = 0.82, Method: Composition-based stats.
Identities = 12/79 (15%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ + +++D + + ++ + L SM + G++G ++G++ ++ G +
Sbjct: 128 EELKKLLDESNHSQYKQEMTQAEVLNSMGTYAPGFGMIGTLIGLIIMLDNLNG---DMAA 184
Query: 171 SIPGIIESLISILLGLCVS 189
G+ +L++ L G+ ++
Sbjct: 185 LGNGLAVALLTTLYGILLA 203
>gi|152987197|ref|YP_001349220.1| flagellar motor protein [Pseudomonas aeruginosa PA7]
gi|150962355|gb|ABR84380.1| probable chemotaxis transmembrane proton channel [Pseudomonas
aeruginosa PA7]
Length = 246
Score = 38.2 bits (88), Expect = 0.83, Method: Composition-based stats.
Identities = 18/115 (15%), Positives = 45/115 (39%), Gaps = 5/115 (4%)
Query: 75 SLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSF 134
+ + +GL +I + + + + I +++V + + +
Sbjct: 87 TARKEGLLGLESIADAEADPYAR-KGLQLLVDGAEPEVIRSILEVDLFTQEGRDLQAAKV 145
Query: 135 LGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVS 189
SM +GI+GAV+G++ ++A N GI + ++ + G+ +
Sbjct: 146 FESMGGYAPTIGIIGAVMGLIHVMGNLA----NPAQLGSGIAVAFVATIYGVGFA 196
>gi|227820850|ref|YP_002824820.1| flagellar motor protein MotA [Sinorhizobium fredii NGR234]
gi|227339849|gb|ACP24067.1| chemotaxis protein motility protein A [Sinorhizobium fredii NGR234]
Length = 292
Score = 38.2 bits (88), Expect = 0.84, Method: Composition-based stats.
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 3/77 (3%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI 172
I+ +MD I + + L SM A +GI+ AVLG++ +I+ V
Sbjct: 143 IEALMDEEIHTITHDKMKCYHALTSMGDALPAIGIVAAVLGVIKAMGAIS---EAPEVLG 199
Query: 173 PGIIESLISILLGLCVS 189
I +L+ LLG+ +S
Sbjct: 200 AKIAAALVGTLLGVFLS 216
>gi|332141876|ref|YP_004427614.1| flagellar motor protein PomA [Alteromonas macleodii str. 'Deep
ecotype']
gi|327551898|gb|AEA98616.1| flagellar motor protein PomA [Alteromonas macleodii str. 'Deep
ecotype']
Length = 253
Score = 38.2 bits (88), Expect = 0.84, Method: Composition-based stats.
Identities = 16/121 (13%), Positives = 41/121 (33%), Gaps = 4/121 (3%)
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+E + + G A+ + +S + + + I+ E
Sbjct: 77 IEKIVEMADAARKGGFLALEEAEISNEFMQKGVDMLVDGHDIEVVRETLAKDISMTSERH 136
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCV 188
SF M +G++G ++G++ ++ + P + +L++ L G
Sbjct: 137 DFGASFFKGMGDIAPAMGMIGTLIGLVAMLSNM----DDPKAIGPAMAVALLTTLYGAFF 192
Query: 189 S 189
+
Sbjct: 193 A 193
>gi|220917667|ref|YP_002492971.1| MotA/TolQ/ExbB proton channel [Anaeromyxobacter dehalogenans 2CP-1]
gi|219955521|gb|ACL65905.1| MotA/TolQ/ExbB proton channel [Anaeromyxobacter dehalogenans 2CP-1]
Length = 261
Score = 38.2 bits (88), Expect = 0.85, Method: Composition-based stats.
Identities = 16/77 (20%), Positives = 33/77 (42%), Gaps = 4/77 (5%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI 172
++ A+ E EE + +GILGAVLG++ +++ S+
Sbjct: 124 TRSTLEAAVDAEYEEHAVGAKVWEAAGGFAPTIGILGAVLGLIHVMENL----SDPSKLG 179
Query: 173 PGIIESLISILLGLCVS 189
GI + ++ + G+ +
Sbjct: 180 GGIAVAFVATVYGVGSA 196
>gi|158320523|ref|YP_001513030.1| MotA/TolQ/ExbB proton channel [Alkaliphilus oremlandii OhILAs]
gi|158140722|gb|ABW19034.1| MotA/TolQ/ExbB proton channel [Alkaliphilus oremlandii OhILAs]
Length = 261
Score = 38.2 bits (88), Expect = 0.85, Method: Composition-based stats.
Identities = 13/111 (11%), Positives = 43/111 (38%), Gaps = 5/111 (4%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ + +++ ++ E + ++ + G++G ++G++ + + +
Sbjct: 121 ELVRNLLETELSFIEERHRNGQAIFEALGANAPAFGMVGTLIGLVNMLKKL----DDPSA 176
Query: 171 SIPGIIESLISILLG-LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAI 220
P + +LI+ G L ++ K S++ ++ E +I
Sbjct: 177 IGPSMAVALITTFYGSLFANLIFLPMATKLKLKSREEILRKEIMVEGLLSI 227
>gi|107100894|ref|ZP_01364812.1| hypothetical protein PaerPA_01001924 [Pseudomonas aeruginosa PACS2]
gi|218892667|ref|YP_002441536.1| flagellar motor protein [Pseudomonas aeruginosa LESB58]
gi|254239809|ref|ZP_04933131.1| MotC [Pseudomonas aeruginosa 2192]
gi|126193187|gb|EAZ57250.1| MotC [Pseudomonas aeruginosa 2192]
gi|218772895|emb|CAW28707.1| MotC [Pseudomonas aeruginosa LESB58]
Length = 246
Score = 38.2 bits (88), Expect = 0.85, Method: Composition-based stats.
Identities = 18/115 (15%), Positives = 45/115 (39%), Gaps = 5/115 (4%)
Query: 75 SLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSF 134
+ + +GL +I + + + + I +++V + + +
Sbjct: 87 TARKEGLLGLESIADAEPDPYAR-KGLQLLVDGAEPEVIRSILEVDLFTQESRDLQAAKV 145
Query: 135 LGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVS 189
SM +GI+GAV+G++ ++A N GI + ++ + G+ +
Sbjct: 146 FESMGGYAPTIGIIGAVMGLIHVMGNLA----NPAQLGSGIAVAFVATIYGVGFA 196
>gi|146307822|ref|YP_001188287.1| flagellar motor protein [Pseudomonas mendocina ymp]
gi|145576023|gb|ABP85555.1| MotA/TolQ/ExbB proton channel [Pseudomonas mendocina ymp]
Length = 246
Score = 38.2 bits (88), Expect = 0.85, Method: Composition-based stats.
Identities = 18/114 (15%), Positives = 46/114 (40%), Gaps = 5/114 (4%)
Query: 76 LKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFL 135
+ +GL A+ + + + + I +++V + + + L
Sbjct: 88 ARKEGLLGLEAVADAEPDPYAR-KGLQLLVDGAEPESIRSILEVDLYTQEARDIQAAKVL 146
Query: 136 GSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVS 189
SM +GI+GAV+G++ ++A + + GI + ++ + G+ +
Sbjct: 147 ESMGGYAPTIGIIGAVMGLIHVMGNLA----DPSMLGSGIAVAFVATIYGVGFA 196
>gi|21227699|ref|NP_633621.1| integral membrane protein [Methanosarcina mazei Go1]
gi|20906094|gb|AAM31293.1| integral membrane protein [Methanosarcina mazei Go1]
Length = 197
Score = 38.2 bits (88), Expect = 0.85, Method: Composition-based stats.
Identities = 8/81 (9%), Positives = 34/81 (41%), Gaps = 2/81 (2%)
Query: 109 IQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN 168
++++ ++ ++ ++L S+ G ++G++G ++ + ++
Sbjct: 87 LKEKHLPAIERLSQEYEIQMAKRLEHTKITSTIGPMLGLMGTLIPLGPALIGLSAGDLET 146
Query: 169 VVSIPGIIESLISILLGLCVS 189
+ I + + ++GL +
Sbjct: 147 LAQNLMIAFA--TTVVGLFAA 165
>gi|59713369|ref|YP_206144.1| flagellar motor protein MotA2 [Vibrio fischeri ES114]
gi|59481617|gb|AAW87256.1| flagellar motor protein MotA2 [Vibrio fischeri ES114]
Length = 260
Score = 38.2 bits (88), Expect = 0.86, Method: Composition-based stats.
Identities = 12/79 (15%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ + +++D + + ++ + L SM + G++G ++G++ ++ G +
Sbjct: 128 EELKKLLDESNHSQYKQEMTQAEVLNSMGTYAPGFGMIGTLIGLIIMLDNLNG---DMAA 184
Query: 171 SIPGIIESLISILLGLCVS 189
G+ +L++ L G+ ++
Sbjct: 185 LGNGLAVALLTTLYGILLA 203
>gi|134298232|ref|YP_001111728.1| flagellar motor protein MotA [Desulfotomaculum reducens MI-1]
gi|134050932|gb|ABO48903.1| MotA/TolQ/ExbB proton channel [Desulfotomaculum reducens MI-1]
Length = 268
Score = 38.2 bits (88), Expect = 0.86, Method: Composition-based stats.
Identities = 15/97 (15%), Positives = 37/97 (38%), Gaps = 7/97 (7%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ + +M+ I E + +G+LGAV+G++ ++ S+
Sbjct: 123 EFVKFVMEEEIYATEERHRSGALIFTQAGTYAPTLGVLGAVVGLIAALGNL----SDIEK 178
Query: 171 SIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFA 207
I + ++ LLG+ + ++ K+ +
Sbjct: 179 LGHSIAAAFVATLLGIFSG---YVLWHPIANKLKRIS 212
>gi|161873|gb|AAA30131.1| cysteine protease [Theileria parva]
Length = 439
Score = 38.2 bits (88), Expect = 0.88, Method: Composition-based stats.
Identities = 14/99 (14%), Positives = 37/99 (37%), Gaps = 8/99 (8%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQF-----REFEQLFWSGQS--LETVCKSLKN 78
++ L S++S + K +R+ ++F L S + + + + +
Sbjct: 49 VVLFFLAGVSVVS-YFLFSKYKMLNKFKRELDDHLTKDFPNLERSKRDTCFDELTRLFGD 107
Query: 79 HHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMM 117
+ E+++ K R Q+R++R++
Sbjct: 108 GFLSDDPKLEYEVYREFEEFNSKYNRRHATQQERLNRLV 146
>gi|71027317|ref|XP_763302.1| cysteine proteinase [Theileria parva strain Muguga]
gi|68350255|gb|EAN31019.1| cysteine proteinase, putative [Theileria parva]
Length = 443
Score = 38.2 bits (88), Expect = 0.88, Method: Composition-based stats.
Identities = 14/99 (14%), Positives = 37/99 (37%), Gaps = 8/99 (8%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQF-----REFEQLFWSGQS--LETVCKSLKN 78
++ L S++S + K +R+ ++F L S + + + + +
Sbjct: 49 VVLFFLAGVSVVS-YFLFSKYKMLNKFKRELDDHLTKDFPNLERSKRDTCFDELTRLFGD 107
Query: 79 HHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMM 117
+ E+++ K R Q+R++R++
Sbjct: 108 GFLSDDPKLEYEVYREFEEFNSKYNRRHATQQERLNRLV 146
>gi|71027319|ref|XP_763303.1| cysteine proteinase [Theileria parva strain Muguga]
gi|93141253|sp|P22497|CYSP_THEPA RecName: Full=Cysteine proteinase; Flags: Precursor
gi|68350256|gb|EAN31020.1| cysteine proteinase [Theileria parva]
Length = 440
Score = 38.2 bits (88), Expect = 0.88, Method: Composition-based stats.
Identities = 14/99 (14%), Positives = 37/99 (37%), Gaps = 8/99 (8%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQF-----REFEQLFWSGQS--LETVCKSLKN 78
++ L S++S + K +R+ ++F L S + + + + +
Sbjct: 50 VVLFFLAGVSVVS-YFLFSKYKMLNKFKRELDDHLTKDFPNLERSKRDTCFDELTRLFGD 108
Query: 79 HHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMM 117
+ E+++ K R Q+R++R++
Sbjct: 109 GFLSDDPKLEYEVYREFEEFNSKYNRRHATQQERLNRLV 147
>gi|15596657|ref|NP_250151.1| flagellar motor protein [Pseudomonas aeruginosa PAO1]
gi|116049405|ref|YP_791792.1| flagellar motor protein [Pseudomonas aeruginosa UCBPP-PA14]
gi|254234558|ref|ZP_04927881.1| MotC [Pseudomonas aeruginosa C3719]
gi|296390173|ref|ZP_06879648.1| flagellar motor protein [Pseudomonas aeruginosa PAb1]
gi|313106459|ref|ZP_07792690.1| chemotaxis protein MotC [Pseudomonas aeruginosa 39016]
gi|9947412|gb|AAG04849.1|AE004575_8 MotC [Pseudomonas aeruginosa PAO1]
gi|3721572|dbj|BAA33551.1| ORF1 [Pseudomonas aeruginosa]
gi|115584626|gb|ABJ10641.1| chemotaxis protein MotC [Pseudomonas aeruginosa UCBPP-PA14]
gi|126166489|gb|EAZ52000.1| MotC [Pseudomonas aeruginosa C3719]
gi|310879192|gb|EFQ37786.1| chemotaxis protein MotC [Pseudomonas aeruginosa 39016]
Length = 246
Score = 38.2 bits (88), Expect = 0.88, Method: Composition-based stats.
Identities = 18/115 (15%), Positives = 45/115 (39%), Gaps = 5/115 (4%)
Query: 75 SLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSF 134
+ + +GL +I + + + + I +++V + + +
Sbjct: 87 TARKEGLLGLESIADAEPDPYAR-KGLQLLVDGAEPEVIRSILEVDLFTQESRDLQAAKV 145
Query: 135 LGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVS 189
SM +GI+GAV+G++ ++A N GI + ++ + G+ +
Sbjct: 146 FESMGGYAPTIGIIGAVMGLIHVMGNLA----NPAQLGSGIAVAFVATIYGVGFA 196
>gi|254517029|ref|ZP_05129087.1| flagellar motor component [gamma proteobacterium NOR5-3]
gi|219674534|gb|EED30902.1| flagellar motor component [gamma proteobacterium NOR5-3]
Length = 251
Score = 38.2 bits (88), Expect = 0.89, Method: Composition-based stats.
Identities = 10/80 (12%), Positives = 37/80 (46%), Gaps = 4/80 (5%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
++ ++ ++ + + +E T + + +G++G ++G++ ++ S+
Sbjct: 118 REVVNTVLSKDMQQTIERHTWGAKVFSATADVAPAMGMIGTLIGLVQMLSNM----SDPK 173
Query: 170 VSIPGIIESLISILLGLCVS 189
P + +L++ L G ++
Sbjct: 174 SIGPAMAVALLTTLYGAMLA 193
>gi|49089296|gb|AAT51667.1| PA1460 [synthetic construct]
Length = 247
Score = 38.2 bits (88), Expect = 0.89, Method: Composition-based stats.
Identities = 18/115 (15%), Positives = 45/115 (39%), Gaps = 5/115 (4%)
Query: 75 SLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSF 134
+ + +GL +I + + + + I +++V + + +
Sbjct: 87 TARKEGLLGLESIADAEPDPYAR-KGLQLLVDGAEPEVIRSILEVDLLTQESRDLQAAKV 145
Query: 135 LGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVS 189
SM +GI+GAV+G++ ++A N GI + ++ + G+ +
Sbjct: 146 FESMGGYAPTIGIIGAVMGLIHVMGNLA----NPAQLGSGIAVAFVATIYGVGFA 196
>gi|319952382|ref|YP_004163649.1| hypothetical protein Celal_0821 [Cellulophaga algicola DSM 14237]
gi|319421042|gb|ADV48151.1| hypothetical protein Celal_0821 [Cellulophaga algicola DSM 14237]
Length = 446
Score = 38.2 bits (88), Expect = 0.91, Method: Composition-based stats.
Identities = 26/132 (19%), Positives = 58/132 (43%), Gaps = 22/132 (16%)
Query: 109 IQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMG---FFQSIAGYY 165
++D +DR +D I S L +G++G ++G++G F S++
Sbjct: 44 VKDIVDRNIDKVDDEISNRI-----------SIPLYLGLIGTMVGIVGGLFFMPSLSVSN 92
Query: 166 SNNVVSIPGIIE-------SLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFA-NEF 217
++ +I GI ++I+ + GL +++ S++ + + + F ++
Sbjct: 93 QESLDAIGGIDSLLGGVKIAMIASVTGLLLTVISNMVFLNVRKSVEYKKNDFFSFIQSDL 152
Query: 218 SAILSRQTEGNI 229
ILS+ T +I
Sbjct: 153 LPILSKNTASSI 164
>gi|78043109|ref|YP_359810.1| chemotaxis motA protein [Carboxydothermus hydrogenoformans Z-2901]
gi|77995224|gb|ABB14123.1| chemotaxis motA protein [Carboxydothermus hydrogenoformans Z-2901]
Length = 267
Score = 38.2 bits (88), Expect = 0.91, Method: Composition-based stats.
Identities = 14/79 (17%), Positives = 28/79 (35%), Gaps = 4/79 (5%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ +++ I E F + +GI+G V+G++ G S
Sbjct: 122 ELFRSILENEIYAIAERHRAGAEFFEAAGGYAPTMGIIGTVMGLVHVL----GQLSTPEK 177
Query: 171 SIPGIIESLISILLGLCVS 189
P I + + L G+ +
Sbjct: 178 LGPAIAMAFTATLYGVSSA 196
>gi|120552992|ref|YP_957343.1| MotA/TolQ/ExbB proton channel [Marinobacter aquaeolei VT8]
gi|120322841|gb|ABM17156.1| MotA/TolQ/ExbB proton channel [Marinobacter aquaeolei VT8]
Length = 257
Score = 38.2 bits (88), Expect = 0.91, Method: Composition-based stats.
Identities = 22/196 (11%), Positives = 64/196 (32%), Gaps = 23/196 (11%)
Query: 6 LAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS 65
LA I + A+ + + L I +++V + K + F F +
Sbjct: 10 LAGTLIVLLAMLANATVLTFLNLPGLAIVLGGTFAVTLIKF----RMPSVLSAFRLAFRA 65
Query: 66 GQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQ------------DRI 113
+ + + + + +G+ + E + +Q + +
Sbjct: 66 AFT-DKLARPAELIREVGV--LARVVRKEGILGLENHDTKDEFLQKAINLCVDGHPPELV 122
Query: 114 DRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP 173
+ + + E + + +G+LG ++G++ ++ + P
Sbjct: 123 EEALLQDSQQTAERYEVAERVFRGIGESAPAIGMLGTLVGLVQMLNTL----DDPSSIGP 178
Query: 174 GIIESLISILLGLCVS 189
+ +L++ L G ++
Sbjct: 179 AMAIALLTTLYGAFIA 194
>gi|311696642|gb|ADP99515.1| MotA/TolQ/ExbB proton channel [marine bacterium HP15]
Length = 248
Score = 38.2 bits (88), Expect = 0.91, Method: Composition-based stats.
Identities = 19/188 (10%), Positives = 62/188 (32%), Gaps = 27/188 (14%)
Query: 23 AVKCIITLLFIFSILS------WSVIIQKSVNFITLRRQFREFEQLFW---SGQSLETVC 73
+ I+ +L S L+ ++++ + ++ + F S + +
Sbjct: 4 VLIVIMAMLANASFLTFLNLPGLAIVLGGTFAVTLIKFRMASVMSAFRLAMSAAFTDRMA 63
Query: 74 KSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQ------------DRIDRMMDVAI 121
+ + +G A+ + E + +Q + ++ +
Sbjct: 64 RPTELIREVGSLAMVVR--KEGILGLENHQTDNEFLQKAINLCVDGHPPELVEEALAQET 121
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLIS 181
+ E + + +G+LG ++G++ ++ + P + +L++
Sbjct: 122 QQTAERYEVAERVFRGIGESAPAIGMLGTLVGLVQMLNTL----DDPSSIGPAMAIALLT 177
Query: 182 ILLGLCVS 189
L G ++
Sbjct: 178 TLYGAFIA 185
>gi|148976606|ref|ZP_01813293.1| flagellar motor protein PomA [Vibrionales bacterium SWAT-3]
gi|145963957|gb|EDK29215.1| flagellar motor protein PomA [Vibrionales bacterium SWAT-3]
Length = 254
Score = 38.2 bits (88), Expect = 0.91, Method: Composition-based stats.
Identities = 11/75 (14%), Positives = 29/75 (38%), Gaps = 4/75 (5%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
D + + IA E + + +G++G ++G++ ++ +
Sbjct: 119 DVVRAALQKDIALTTERHEQGAKVFSAFGDVSPAMGMIGTLVGLVAMLSNM----DDPKA 174
Query: 171 SIPGIIESLISILLG 185
P + +L++ L G
Sbjct: 175 IGPAMAVALLTTLYG 189
>gi|15678698|ref|NP_275813.1| hypothetical protein MTH671 [Methanothermobacter thermautotrophicus
str. Delta H]
gi|2621754|gb|AAB85176.1| unknown [Methanothermobacter thermautotrophicus str. Delta H]
Length = 226
Score = 38.2 bits (88), Expect = 0.92, Method: Composition-based stats.
Identities = 24/196 (12%), Positives = 74/196 (37%), Gaps = 10/196 (5%)
Query: 27 IITLLFIFSILSWSVIIQKSVNFI-TLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLA 85
+I L +F + + + + +R +E E S + T K ++ ++ +
Sbjct: 25 VIAGLLLFMVYAIVTLGGLISEYSGRIRTDVKELESAIKSISNPGTPEKIIEVVDSMDIP 84
Query: 86 AIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLV 145
+ +++ + + G +S + ++++ R + + + ++ G +
Sbjct: 85 QSQKAVLTDIAGTAELGPKSREAL---ARKLIENEELRAAKSLEK----TDIVTRLGPTL 137
Query: 146 GILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKK 205
G++G ++ M ++ N + II + + ++GL + I ++
Sbjct: 138 GLMGTLIPMGPGLAALGAGDINTLAQA--IIIAFDTTVVGLASGGIAYIISKVRRRWYEE 195
Query: 206 FAMQMEGFANEFSAIL 221
+ +E A ++
Sbjct: 196 YLSNLETMAEAVLEVM 211
>gi|90406797|ref|ZP_01214989.1| flagellar motor protein [Psychromonas sp. CNPT3]
gi|90312034|gb|EAS40127.1| flagellar motor protein [Psychromonas sp. CNPT3]
Length = 250
Score = 38.2 bits (88), Expect = 0.94, Method: Composition-based stats.
Identities = 17/77 (22%), Positives = 31/77 (40%), Gaps = 4/77 (5%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI 172
+ ++ I E E SM +GI+GAV+G++ GY S
Sbjct: 124 LQEILQQDIDLESEHYERSAQIYESMGGYSPTIGIIGAVMGLIQAM----GYLSEPDKLG 179
Query: 173 PGIIESLISILLGLCVS 189
GI + ++ + G+ +
Sbjct: 180 AGIAVAFVATIYGVGFA 196
>gi|119775567|ref|YP_928307.1| flagellar motor protein PomA [Shewanella amazonensis SB2B]
gi|119768067|gb|ABM00638.1| MotA/TolQ/ExbB proton channel [Shewanella amazonensis SB2B]
Length = 255
Score = 38.2 bits (88), Expect = 0.94, Method: Composition-based stats.
Identities = 14/85 (16%), Positives = 34/85 (40%), Gaps = 8/85 (9%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
D + ++ IA E + + +G++G ++G++ ++ +
Sbjct: 119 DVVREALEKDIALTEERHRTGIGIFRAFGDVAPAMGMIGTLIGLVAMLSNM----DDPKS 174
Query: 171 SIPGIIESLISILLGL----CVSIP 191
P + +L++ L G V+IP
Sbjct: 175 IGPAMAVALLTTLYGAMLANMVAIP 199
>gi|187919310|ref|YP_001888341.1| MotA/TolQ/ExbB proton channel [Burkholderia phytofirmans PsJN]
gi|187717748|gb|ACD18971.1| MotA/TolQ/ExbB proton channel [Burkholderia phytofirmans PsJN]
Length = 254
Score = 38.2 bits (88), Expect = 0.94, Method: Composition-based stats.
Identities = 25/159 (15%), Positives = 57/159 (35%), Gaps = 21/159 (13%)
Query: 38 SWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGL---AAIFMSAMSE 94
+W+ + R+ ++ +SL + + G+ +I ++
Sbjct: 52 TWARFFDGIKQLRLAFVKARQVDR-----ESLSVLLEWGDQAKLNGMLVFESIEAGGINP 106
Query: 95 WKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSM----SSAGLLVGILGA 150
+ K + + + +++ A+ REL+ + GILGA
Sbjct: 107 FAKRGLELLANGVS-----TAVLEDALQRELDAYERNHMLAARIWQQAGGYAPTFGILGA 161
Query: 151 VLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVS 189
VLG++ + G+ GI + ++ L GL ++
Sbjct: 162 VLGLIQ----VTGHMLEPAQLGQGIAVAFVATLYGLALA 196
>gi|330828821|ref|YP_004391773.1| MotA/TolQ/ExbB proton channel [Aeromonas veronii B565]
gi|328803957|gb|AEB49156.1| MotA/TolQ/ExbB proton channel [Aeromonas veronii B565]
Length = 245
Score = 38.2 bits (88), Expect = 0.96, Method: Composition-based stats.
Identities = 28/153 (18%), Positives = 54/153 (35%), Gaps = 13/153 (8%)
Query: 67 QSLETVCKSLKN----HHNIGLAAIFMSAMSEWKKSCDKGARSPIG--IQDRIDRMMDVA 120
Q L T + L++ GL A+ A E +G + + I +++
Sbjct: 69 QDLATQAERLQSWAVFARQQGLLALENQAEHEEDNFTRQGLGMIVDGVSTEDIRMLLEAD 128
Query: 121 IARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLI 180
I E E +M +GI+GAVLG++ + + GI + +
Sbjct: 129 IDIEQERNEHAARVFEAMGGYSPTIGIIGAVLGLIQAMFHL----EDPSALGAGIAVAFV 184
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGF 213
+ + G+ + ++ Y + F F
Sbjct: 185 ATIYGVGFA---NLIYLPIANRLRAFHYHYALF 214
>gi|325117508|emb|CBZ53060.1| conserved hypothetical protein [Neospora caninum Liverpool]
Length = 1230
Score = 38.2 bits (88), Expect = 0.97, Method: Composition-based stats.
Identities = 26/173 (15%), Positives = 62/173 (35%), Gaps = 28/173 (16%)
Query: 18 MQMGLAVKCIITLLFIFS-ILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSL 76
QM ++ + S +L+ + + F ++ +G S+ +
Sbjct: 873 AQMDAVLEA-----ALASPVLT-----SRLLEFRGAS------QERVATGGSVAR-WTAA 915
Query: 77 KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAI-ARELEEITEKLSFL 135
+ GL+ A++E ++ + R R A+ AR+ + + +L+ L
Sbjct: 916 ASSPESGLSR---GAIAELRERLRDSLKDKSTRARRHFRGFRRAVRARDFQAVRRELADL 972
Query: 136 GSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCV 188
+ G V + + +A S + + GI+ ++ + +G V
Sbjct: 973 AEVG--GPEV---SGIWASVKVGIGLATLASGHTIMG-GIMLAMATSAVGSAV 1019
>gi|116327382|ref|YP_797102.1| endoflagellar motor protein [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
gi|116332003|ref|YP_801721.1| endoflagellar motor protein [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
gi|116120126|gb|ABJ78169.1| Endoflagellar motor protein [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
gi|116125692|gb|ABJ76963.1| Endoflagellar motor protein [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
Length = 244
Score = 38.2 bits (88), Expect = 0.98, Method: Composition-based stats.
Identities = 12/56 (21%), Positives = 25/56 (44%), Gaps = 3/56 (5%)
Query: 134 FLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVS 189
L + VGI+G V+G++G +++ + GI + I+ G+ +
Sbjct: 142 ILETAGGFSPTVGIIGTVMGLVGVLENL---GAGTRALGEGIATAFIATFYGITFA 194
>gi|27380797|ref|NP_772326.1| hypothetical protein bll5686 [Bradyrhizobium japonicum USDA 110]
gi|27353962|dbj|BAC50951.1| bll5686 [Bradyrhizobium japonicum USDA 110]
Length = 256
Score = 37.9 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 18/92 (19%), Positives = 38/92 (41%), Gaps = 8/92 (8%)
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI--------PGIIE 177
+ + F +S + +G+LG ++G + IAG + + V++ G+
Sbjct: 143 DRLRGSNGFGAFVSDTLMKLGLLGTIIGFIIMLAPIAGLDAADKVAMRSSMGLMSDGMAV 202
Query: 178 SLISILLGLCVSIPSSIAYNKFIEDSKKFAMQ 209
++ + L GL SI I Y +++
Sbjct: 203 AMYTTLAGLVGSILVRIQYYMLDAATQRVFSD 234
>gi|149203115|ref|ZP_01880086.1| flagellar motor protein MotA [Roseovarius sp. TM1035]
gi|149143661|gb|EDM31697.1| flagellar motor protein MotA [Roseovarius sp. TM1035]
Length = 289
Score = 37.9 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 27/145 (18%), Positives = 54/145 (37%), Gaps = 12/145 (8%)
Query: 46 SVNFITLRRQFR-EFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGAR 104
I L RQ E+ S + I A ++ +S+ +S
Sbjct: 84 LFELIRLGRQNPIAVEEHIESPND----SAIFSKYPKILADAEAVALISDTLRSASMNYD 139
Query: 105 SPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGY 164
P +++ +++ ++ + L L +M+ +GI+ AVLG++ SI
Sbjct: 140 DPHQVEEVLEKRIEANLHHALHSSHA----LQTMADGLPALGIVAAVLGVIKTMASI--- 192
Query: 165 YSNNVVSIPGIIESLISILLGLCVS 189
+ I +L+ LG+ +S
Sbjct: 193 DQPPEILGKMIGGALVGTFLGVFLS 217
>gi|288553787|ref|YP_003425722.1| flagellar motor protein MotP [Bacillus pseudofirmus OF4]
gi|34485058|gb|AAB94399.2| channel protein [Bacillus pseudofirmus OF4]
gi|288544947|gb|ADC48830.1| Flagellar motor rotation protein motP [Bacillus pseudofirmus OF4]
gi|327187184|dbj|BAK08925.1| A-subunit of channel/stator unit of Na(+)-driven flagellar motor
[Bacillus pseudofirmus]
gi|327187187|dbj|BAK08927.1| A-subunit of channel/stator unit of Na(+)-driven flagellar motor
[Bacillus pseudofirmus]
gi|327187190|dbj|BAK08929.1| A-subunit of channel/stator unit of Na(+)-driven flagellar motor
[Bacillus pseudofirmus]
gi|327187193|dbj|BAK08931.1| A-subunit of channel/stator unit of Na(+)-driven flagellar motor
[Bacillus pseudofirmus]
Length = 266
Score = 37.9 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 12/79 (15%), Positives = 33/79 (41%), Gaps = 4/79 (5%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
D I +M + E + + + G++G ++G++ Q++ ++
Sbjct: 127 DVIKDIMMAEVVAMEERHRKGRAIIEKAGEYAPAWGMIGTLIGLVLMLQNL----NDPAT 182
Query: 171 SIPGIIESLISILLGLCVS 189
P + +L++ L G ++
Sbjct: 183 LGPNMAVALLTTLYGTVLA 201
>gi|266623346|ref|ZP_06116281.1| chemotaxis protein PomA [Clostridium hathewayi DSM 13479]
gi|288864884|gb|EFC97182.1| chemotaxis protein PomA [Clostridium hathewayi DSM 13479]
Length = 283
Score = 37.9 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 12/80 (15%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
+++ ++M+ + + E F +S G++G ++G++ ++ +
Sbjct: 128 SEKVRQVMETELDQLDERHALDRGFYEKAASFAPAFGMIGTLVGLILMLGNM----QDVN 183
Query: 170 VSIPGIIESLISILLGLCVS 189
G+ +LI+ L G ++
Sbjct: 184 ALAKGMATALITTLYGSLLA 203
>gi|120599625|ref|YP_964199.1| flagellar motor protein PomA [Shewanella sp. W3-18-1]
gi|146292381|ref|YP_001182805.1| flagellar motor protein PomA [Shewanella putrefaciens CN-32]
gi|120559718|gb|ABM25645.1| MotA/TolQ/ExbB proton channel [Shewanella sp. W3-18-1]
gi|145564071|gb|ABP75006.1| MotA/TolQ/ExbB proton channel [Shewanella putrefaciens CN-32]
gi|319425681|gb|ADV53755.1| stator-force generator of Na+ coupled flagellar motor, PomA
[Shewanella putrefaciens 200]
Length = 255
Score = 37.9 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 14/85 (16%), Positives = 36/85 (42%), Gaps = 8/85 (9%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ + ++ I E ++ + G +G++G ++G++ ++ S+
Sbjct: 119 EVVRAALEKDIDLTEERHRNGIAIFRAFGDVGPAMGMIGTLVGLVAMLSNM----SDPKS 174
Query: 171 SIPGIIESLISILLGL----CVSIP 191
P + +L++ L G V+IP
Sbjct: 175 IGPAMAVALLTTLYGAMLANMVAIP 199
>gi|311696780|gb|ADP99653.1| MotA/TolQ/ExbB proton channel [marine bacterium HP15]
Length = 262
Score = 37.9 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 35/231 (15%), Positives = 76/231 (32%), Gaps = 25/231 (10%)
Query: 11 ISIFALFMQMGLAVKCI--------------ITLLFIFSILSWSVIIQKSVNFITLRRQF 56
++ L + G + + + L F +++ ++ + +
Sbjct: 1 MTDLTLPLNTGPLTQLVDMGGPVMVVLVALAVIGLVTF----VYLMLLGALYAPRMSGRL 56
Query: 57 REFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRM 116
++ + S + + +G +++ ++ G I
Sbjct: 57 KKTVMDWQSNPASVRPSEIRYQAGRLGRLNPLQRLVADTIEAIHNGEDDRK-----IRET 111
Query: 117 MDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYY--SNNVVSIPG 174
LE L + +++ L+G+LG VLGMM F ++A +N G
Sbjct: 112 AARDAQHSLEPFEAPLKIIEVIAALAPLLGLLGTVLGMMEAFSAMAATEGRANATQLSGG 171
Query: 175 IIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQT 225
I E+L + GL V+IP + ++ + I+ QT
Sbjct: 172 IYEALTTTAAGLVVAIPFAALAAWIEFRLRRIHKTINSTLVSILHIVPEQT 222
>gi|197122875|ref|YP_002134826.1| MotA/TolQ/ExbB proton channel [Anaeromyxobacter sp. K]
gi|196172724|gb|ACG73697.1| MotA/TolQ/ExbB proton channel [Anaeromyxobacter sp. K]
Length = 261
Score = 37.9 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 16/76 (21%), Positives = 33/76 (43%), Gaps = 4/76 (5%)
Query: 114 DRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP 173
++ A+ E EE + +GILGAVLG++ +++ S+
Sbjct: 125 RSTLEAAVDAEYEEHAVGAKVWEAAGGFAPTIGILGAVLGLIHVMENL----SDPSKLGG 180
Query: 174 GIIESLISILLGLCVS 189
GI + ++ + G+ +
Sbjct: 181 GIAVAFVATVYGVGSA 196
>gi|149909330|ref|ZP_01897986.1| flagellar motor protein [Moritella sp. PE36]
gi|149807647|gb|EDM67595.1| flagellar motor protein [Moritella sp. PE36]
Length = 254
Score = 37.9 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 13/127 (10%), Positives = 39/127 (30%), Gaps = 8/127 (6%)
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+E + G A+ + + + + + I
Sbjct: 77 IEQAVEMADAARKGGFLALEEAEVKNQFMQKGIDLLVDGHDATVVSQTLQKDIKLTTARH 136
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLC- 187
+ + +G++G ++G++ ++ + P + +L++ L G
Sbjct: 137 KAGIHVFSMIGEVAPAMGMIGTLIGLVAMLSNM----DDPKSIGPAMAVALLTTLYGAVF 192
Query: 188 ---VSIP 191
++IP
Sbjct: 193 ANMIAIP 199
>gi|150395477|ref|YP_001325944.1| flagellar motor protein MotA [Sinorhizobium medicae WSM419]
gi|150026992|gb|ABR59109.1| MotA/TolQ/ExbB proton channel [Sinorhizobium medicae WSM419]
Length = 292
Score = 37.9 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 3/77 (3%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI 172
I+ +MD I + + L SM A +GI+ AVLG++ +I+ V
Sbjct: 143 IEALMDEEIQTITHDKMKCYHALTSMGDALPAIGIVAAVLGVIKAMGAIS---EAPEVLG 199
Query: 173 PGIIESLISILLGLCVS 189
I +L+ LLG+ +S
Sbjct: 200 AKIAAALVGTLLGVFLS 216
>gi|86147427|ref|ZP_01065739.1| flagellar motor protein [Vibrio sp. MED222]
gi|218710366|ref|YP_002417987.1| flagellar motor protein PomA [Vibrio splendidus LGP32]
gi|85834720|gb|EAQ52866.1| flagellar motor protein [Vibrio sp. MED222]
gi|218323385|emb|CAV19562.1| flagellar motor protein [Vibrio splendidus LGP32]
Length = 254
Score = 37.9 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 11/75 (14%), Positives = 29/75 (38%), Gaps = 4/75 (5%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
D + + IA E + + +G++G ++G++ ++ +
Sbjct: 119 DVVRAALQKDIALTTERHEQGAKVFTAFGDVAPAMGMIGTLVGLVAMLSNM----DDPKA 174
Query: 171 SIPGIIESLISILLG 185
P + +L++ L G
Sbjct: 175 IGPAMAVALLTTLYG 189
>gi|256833231|ref|YP_003161958.1| MotA/TolQ/ExbB proton channel [Jonesia denitrificans DSM 20603]
gi|256686762|gb|ACV09655.1| MotA/TolQ/ExbB proton channel [Jonesia denitrificans DSM 20603]
Length = 261
Score = 37.9 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 23/127 (18%), Positives = 49/127 (38%), Gaps = 6/127 (4%)
Query: 65 SGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQD--RIDRMMDVAIA 122
+ S++T+ + GL A+ +A G RS I D + +++ IA
Sbjct: 74 AAASVDTIVSLAEQARREGLLALEDAAKDIENDFLRDGLRSAIDGTDPEDLRDILEDKIA 133
Query: 123 RELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISI 182
+ E F M +GI+G V+ ++ +++A + I + ++
Sbjct: 134 AKRAEDKVGYKFYDDMGGYAPTIGIVGTVVSLVHVLENLA----DPSELGHMIAAAFLAT 189
Query: 183 LLGLCVS 189
G+ +
Sbjct: 190 FWGIFTA 196
>gi|32266000|ref|NP_860032.1| flagellar motor protein MotA [Helicobacter hepaticus ATCC 51449]
gi|32262049|gb|AAP77098.1| flagellar motor component MotA [Helicobacter hepaticus ATCC 51449]
Length = 256
Score = 37.9 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 22/145 (15%), Positives = 53/145 (36%), Gaps = 15/145 (10%)
Query: 52 LRRQFREFEQLFWS-GQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIG-- 108
++ +E + +F S G +L + + L + ++ + + D R +
Sbjct: 56 IKGAMKELKIVFGSTGVNLNEIIRQLVELATLARKDGVLALEGKAAQIEDDFLRQSLSMI 115
Query: 109 IQDRIDRMMDVAIARELEEIT------EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA 162
I R + + ++E + L + +G++GAV+G+M Q +
Sbjct: 116 IDGRDAHAVREDMEVQIESLEEYYKGCSHFWIL--YAETCPTMGLVGAVMGLMLALQLL- 172
Query: 163 GYYSNNVVSIPGIIESLISILLGLC 187
+ GI + + + G+
Sbjct: 173 ---DDPKAMAAGIAGAFTATVTGIF 194
>gi|109897647|ref|YP_660902.1| flagellar motor protein PomA [Pseudoalteromonas atlantica T6c]
gi|109699928|gb|ABG39848.1| MotA/TolQ/ExbB proton channel [Pseudoalteromonas atlantica T6c]
Length = 254
Score = 37.9 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 15/121 (12%), Positives = 40/121 (33%), Gaps = 4/121 (3%)
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+E + + G A+ + + D + M I+ E
Sbjct: 77 IEKIVEMADAARKGGFLALEEAQIENEFMQKGVDMLVDGHDVDVVRATMAKDISMTTERH 136
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCV 188
+ M +G++G ++G++ ++ + P + +L++ L G +
Sbjct: 137 EFGATIFKGMGDVAPAMGMIGTLIGLVAMLSNM----DDPKSIGPAMAVALLTTLYGAVL 192
Query: 189 S 189
+
Sbjct: 193 A 193
>gi|223936161|ref|ZP_03628074.1| RNA polymerase, sigma-24 subunit, ECF subfamily [bacterium
Ellin514]
gi|223895023|gb|EEF61471.1| RNA polymerase, sigma-24 subunit, ECF subfamily [bacterium
Ellin514]
Length = 551
Score = 37.9 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 27/240 (11%), Positives = 66/240 (27%), Gaps = 39/240 (16%)
Query: 18 MQMGLAVKCIITLLF--IFSILSWSV---IIQKSVNFITLR------RQFREFEQLF--- 63
Q + + +L S+ S ++ + K+ R+ R ++ +
Sbjct: 45 SQAEEITQAVFIILAKKAASLSSGTILSGWLFKTARLTAANYLRTEIRRSRREQEAYMQS 104
Query: 64 ---------WS--GQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDR 112
W L+ L L F+ + K+ + + R
Sbjct: 105 NLHETESEAWKQIAPLLDDAIAELGETDRNALVLRFVEG-KDLKQVGAALGTTEEAAKKR 163
Query: 113 IDRMMDVAIARELEE------ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYS 166
+ R +D + + A + G + S
Sbjct: 164 VSRAVDKLRGLFSRKDITLSAAALSAAIAAHSIQAAPAGLVASVTTGAITGTAVTTTTLS 223
Query: 167 NNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTE 226
++ + + + I G V++ + +AY ++K ++ + R+ E
Sbjct: 224 LVKGTLKLMAWTKVKIAAG--VAVTAMMAYQWHENYTQK--QELHTVQEQLH---QREQE 276
>gi|88799580|ref|ZP_01115156.1| Flagellar motor component [Reinekea sp. MED297]
gi|88777665|gb|EAR08864.1| Flagellar motor component [Reinekea sp. MED297]
Length = 250
Score = 37.9 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 13/85 (15%), Positives = 38/85 (44%), Gaps = 8/85 (9%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
D + +++ + + + SF ++ +G++G ++G++G ++ +
Sbjct: 119 DVVKALLNKDMRMTSDRHRDGKSFFDALGEVAPAMGMIGTLIGLVGMLANM----DDPKT 174
Query: 171 SIPGIIESLISILLGLC----VSIP 191
P + +L++ L G ++IP
Sbjct: 175 IGPAMAVALLTTLYGSFLATVIAIP 199
>gi|89902462|ref|YP_524933.1| MotA/TolQ/ExbB proton channel [Rhodoferax ferrireducens T118]
gi|89347199|gb|ABD71402.1| MotA/TolQ/ExbB proton channel [Rhodoferax ferrireducens T118]
Length = 270
Score = 37.9 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 23/108 (21%), Positives = 40/108 (37%), Gaps = 9/108 (8%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI 172
I+ +MD I E ++ + ++ A GI+ AVLG++ + V
Sbjct: 129 IESLMDSEIDTHHAEAHAPVAAIARLAGALPAFGIVAAVLGVVNT---MGSVGQPPAVLG 185
Query: 173 PGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAI 220
I +L+ LG+ +AY ++E A E I
Sbjct: 186 GMIASALVGTFLGI------LLAYAVVEPLGGVLEQKIEDSAKELQCI 227
>gi|117928059|ref|YP_872610.1| MotA/TolQ/ExbB proton channel [Acidothermus cellulolyticus 11B]
gi|117648522|gb|ABK52624.1| MotA/TolQ/ExbB proton channel [Acidothermus cellulolyticus 11B]
Length = 260
Score = 37.9 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 28/154 (18%), Positives = 55/154 (35%), Gaps = 7/154 (4%)
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQD--RIDRMMDVAIARELEE 127
+ + K GL A+ +A KG + I D + ++D I + E
Sbjct: 79 DELVKLADRARREGLLALEDAANEVDDDFLRKGLQLAIDGTDPEELREILDAEIVAKRTE 138
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLC 187
+ M +GI+G V+ ++ +++ S + I + ++ L G+
Sbjct: 139 YKQGAKLFLDMGGYSPTLGIIGTVVSLIHVLANLSSPESLGKL----IASAFVATLWGVM 194
Query: 188 VS-IPSSIAYNKFIEDSKKFAMQMEGFANEFSAI 220
++ I NK + QME +I
Sbjct: 195 LANIVWLPLSNKIGRLGELAVQQMELVIEGVLSI 228
>gi|307825894|ref|ZP_07656109.1| MotA/TolQ/ExbB proton channel [Methylobacter tundripaludum SV96]
gi|307733013|gb|EFO03875.1| MotA/TolQ/ExbB proton channel [Methylobacter tundripaludum SV96]
Length = 277
Score = 37.9 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 26/123 (21%), Positives = 51/123 (41%), Gaps = 17/123 (13%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ I ++ IAR + + S S+++ G+LG ++ M+ Q I +
Sbjct: 143 EDILSLLKWRIARLRAKEKAEASIFYSLAAYSPAFGMLGTLIAMINMLQII------ELK 196
Query: 171 SIPGII----ESLISILLGLCVSIPSSIAYN----KFIEDSKKFAMQMEGFANEFSAILS 222
I GI +LI+ GL I +++ +N K +++ M M + I
Sbjct: 197 DIAGISYSMGTALITTFYGL---IMANLIFNPIAIKLERRTEQRIMIMSMVMEGITLIAD 253
Query: 223 RQT 225
R++
Sbjct: 254 RRS 256
>gi|332187926|ref|ZP_08389659.1| hypothetical protein SUS17_3016 [Sphingomonas sp. S17]
gi|332012087|gb|EGI54159.1| hypothetical protein SUS17_3016 [Sphingomonas sp. S17]
Length = 287
Score = 37.9 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 22/95 (23%), Positives = 40/95 (42%), Gaps = 6/95 (6%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI 172
++ +MD AI E+ L S++ + +GI+ AVLG++ SI V
Sbjct: 147 VEEVMDNAIKTHHHEVEGPQGTLQSLADSLPALGIVAAVLGIVKTMGSIDK---PPSVLG 203
Query: 173 PGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFA 207
I +L+ +G+ ++ N F K+
Sbjct: 204 GMIGSALVGTFMGVLLAYGIV---NPFAGRLKQVI 235
>gi|238927471|ref|ZP_04659231.1| flagellar motor protein A [Selenomonas flueggei ATCC 43531]
gi|238884753|gb|EEQ48391.1| flagellar motor protein A [Selenomonas flueggei ATCC 43531]
Length = 263
Score = 37.9 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 17/97 (17%), Positives = 40/97 (41%), Gaps = 7/97 (7%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
D + ++D +A E E S + +G+LGAV+G++ ++ ++
Sbjct: 128 DFVGDVLDAELAIMQERHAEGRSMFTQAGTYAPTLGVLGAVVGLIAALGNL----NDIDK 183
Query: 171 SIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFA 207
I + ++ +LG+ + ++ F K +
Sbjct: 184 LGHSIAAAFVATILGIFTG---YVLWHPFANKLKIIS 217
>gi|94264077|ref|ZP_01287876.1| MotA/TolQ/ExbB proton channel [delta proteobacterium MLMS-1]
gi|93455493|gb|EAT05683.1| MotA/TolQ/ExbB proton channel [delta proteobacterium MLMS-1]
Length = 253
Score = 37.9 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 15/101 (14%), Positives = 41/101 (40%), Gaps = 10/101 (9%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ I+ ++ + L+ M + G++G ++G++ + +
Sbjct: 119 EFIEEVLQKEVDLTLDRHRVGRKVFEGMGISAPAFGMIGTLVGLVQMLAHL----DDPAA 174
Query: 171 SIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
PG+ ++++ L G + +A FI + K +++ E
Sbjct: 175 IGPGMAVAMLTTLYG------AVLANFLFIPLADKLSLRSE 209
>gi|183219621|ref|YP_001837617.1| chemotaxis MotA protein [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Paris)']
gi|189909760|ref|YP_001961315.1| endoflagellar motor protein [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167774436|gb|ABZ92737.1| Endoflagellar motor protein [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167778043|gb|ABZ96341.1| Chemotaxis MotA protein; putative membrane protein [Leptospira
biflexa serovar Patoc strain 'Patoc 1 (Paris)']
Length = 260
Score = 37.9 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 16/99 (16%), Positives = 39/99 (39%), Gaps = 9/99 (9%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ + +M+ I + + + G+LG ++G++G +++ G ++ +
Sbjct: 122 ELVRNIMETEIGNTAARHAYGRGWWDAYAGFAPGFGMLGTLVGLVGMLKNLGGGDASAI- 180
Query: 171 SIPGIIESLISILLGLCV----SIPSSIAYNKFIEDSKK 205
G+ +LI+ L G + P K S+
Sbjct: 181 -GQGMATALITTLYGSLAQNLFAAPVV---RKLTRRSED 215
>gi|170700357|ref|ZP_02891368.1| MotA/TolQ/ExbB proton channel [Burkholderia ambifaria IOP40-10]
gi|171318848|ref|ZP_02907984.1| MotA/TolQ/ExbB proton channel [Burkholderia ambifaria MEX-5]
gi|170134744|gb|EDT03061.1| MotA/TolQ/ExbB proton channel [Burkholderia ambifaria IOP40-10]
gi|171095947|gb|EDT40883.1| MotA/TolQ/ExbB proton channel [Burkholderia ambifaria MEX-5]
Length = 254
Score = 37.9 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 25/155 (16%), Positives = 48/155 (30%), Gaps = 13/155 (8%)
Query: 38 SWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKK 97
+W+ + +E ++ L K + ++ +S + + +
Sbjct: 52 TWARFFDAVKQLRLAFVRAQEVDRK--HLTDLLEWGDRAKLDGLLAFESMDVSGIHPFAR 109
Query: 98 S---CDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGM 154
S ++D + R +D L GILG+VLG+
Sbjct: 110 RGLELLANGVSTAVLEDALHRELDAYERSRLAAARVWQQ----AGGYAPTFGILGSVLGL 165
Query: 155 MGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVS 189
+ I PGI + I+ L GL +
Sbjct: 166 VQVTSHIL----EPAQLGPGIAVAFIATLYGLAFA 196
>gi|24373102|ref|NP_717145.1| flagellar motor protein PomA [Shewanella oneidensis MR-1]
gi|24347291|gb|AAN54589.1|AE015599_1 chemotaxis motA protein [Shewanella oneidensis MR-1]
Length = 255
Score = 37.9 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 22/186 (11%), Positives = 66/186 (35%), Gaps = 18/186 (9%)
Query: 13 IFALFMQMGLAVKCIITLLFIFSIL-----SWSVIIQKS---VNFITLRRQFREFEQLFW 64
I+++ + G ++ + S++ S+ V++ K ++ + F
Sbjct: 17 IWSMVISGG-----VMMFYDLASVVIVFGGSFFVVMMKFNLKQFLGAVKIAAKAFIFKID 71
Query: 65 SGQSL-ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAR 123
+ L E G A+ + +S + + ++ I
Sbjct: 72 RPEDLIEQSVTMADAARKGGFLALEEAQISNSFMQKAVDMLVDGHDGEVVRAALEKDITL 131
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISIL 183
+ ++ + + G +G++G ++G++ ++ S+ P + +L++ L
Sbjct: 132 TEDRHRIGIAIFRAFADVGPAMGMIGTLVGLVAMLANM----SDPKSIGPSMAVALLTTL 187
Query: 184 LGLCVS 189
G ++
Sbjct: 188 YGAVLA 193
>gi|251772420|gb|EES52987.1| putative flagellar motor component (MotA) [Leptospirillum
ferrodiazotrophum]
Length = 264
Score = 37.9 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 16/77 (20%), Positives = 31/77 (40%), Gaps = 4/77 (5%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI 172
+ ++V EE SM +GILGAVLG++ ++ +
Sbjct: 127 VREALEVEAHYIEEEEGVVYKVFESMGGYAPTIGILGAVLGLIHVMSNMG----DPGKLA 182
Query: 173 PGIIESLISILLGLCVS 189
GI + ++ + G+ +
Sbjct: 183 EGIATAFVATVYGVGSA 199
>gi|149177439|ref|ZP_01856043.1| hypothetical protein PM8797T_19096 [Planctomyces maris DSM 8797]
gi|148843772|gb|EDL58131.1| hypothetical protein PM8797T_19096 [Planctomyces maris DSM 8797]
Length = 492
Score = 37.9 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 33/236 (13%), Positives = 78/236 (33%), Gaps = 36/236 (15%)
Query: 15 ALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQL---FWSGQSLET 71
LF+ G L+F+ S S +++I K ++ F+ L S +T
Sbjct: 115 ELFLDRGWVP---FALVFLMS-WSATILILKYQKLGK-QKDSMLFDTLPTDISEDISEKT 169
Query: 72 VCKSLKNHHNIG-------LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARE 124
V K +++ N+ L + + ++ + + +
Sbjct: 170 VAKFIEHVKNLPVDPRESFLVNRVLRGLEHFRVLKSSSE---------VSNRLQSQSEID 220
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV----------SIPG 174
+ + L A ++G +G V+G+ +G + G
Sbjct: 221 ATAVDSSYTILKVFIWAIPILGFIGTVIGISAAVGGFSGGMDDATDISALKESLGSVTGG 280
Query: 175 IIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
+ + + L+ L +S+ + + + ++ + NE +L R E + +
Sbjct: 281 LSTAFDTTLVALVMSMLVMFPSSSMQKSEEDLLNWVDEYCNE--NLLKRLKESDQA 334
>gi|116619473|ref|YP_821629.1| MotA/TolQ/ExbB proton channel [Candidatus Solibacter usitatus
Ellin6076]
gi|116222635|gb|ABJ81344.1| MotA/TolQ/ExbB proton channel [Candidatus Solibacter usitatus
Ellin6076]
Length = 303
Score = 37.9 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 23/149 (15%), Positives = 55/149 (36%), Gaps = 6/149 (4%)
Query: 75 SLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSF 134
+ H + L + + A +Q+ + +MM++ IA +
Sbjct: 114 KARKHGIVSLEGDASEIADPFLRKALNLAVDGTDMQE-LRKMMEIDIALSEHAAESEARV 172
Query: 135 LGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVS-IPSS 193
S +GI+GAV+G++ + + + GI + ++ + G+ ++ I
Sbjct: 173 WDSAGGYAPTIGIIGAVMGLIQVMKHL----EDIKEVGHGIAVAFVATVYGVGLANIFFL 228
Query: 194 IAYNKFIEDSKKFAMQMEGFANEFSAILS 222
A NK + +++ + I+
Sbjct: 229 PAANKLKARMRASSLRKDMVLEGVIGIVE 257
>gi|114799271|ref|YP_761323.1| putative TonB system transport protein ExbB [Hyphomonas neptunium
ATCC 15444]
gi|114739445|gb|ABI77570.1| putative TonB system transport protein ExbB [Hyphomonas neptunium
ATCC 15444]
Length = 169
Score = 37.9 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 24/187 (12%), Positives = 66/187 (35%), Gaps = 39/187 (20%)
Query: 27 IITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAA 86
++ ++ + + W++I+++ F +Q
Sbjct: 16 VLIVIMAATFVMWALILERLFYFRFAHKQ------------------------------- 44
Query: 87 IFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVG 146
+ A+++W D+ + I+D++ ++ + + +M + L+G
Sbjct: 45 VAADAIAQWNARTDRKSVPAHWIRDKL-------VSEVRAKAEANVQLTKAMVALAPLLG 97
Query: 147 ILGAVLGMMGFFQSIA-GYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKK 205
+LG V GM+ F +A ++ G+ + I + G+ S+ + + +
Sbjct: 98 LLGTVTGMVAVFDIMAITSGADAKAMSAGVSRATIPTMAGMVASLSGILFTSGMDRRVNR 157
Query: 206 FAMQMEG 212
+E
Sbjct: 158 SVQAVED 164
>gi|308273522|emb|CBX30124.1| Uncharacterized 29.3 kDa protein in ccpA 3'region [uncultured
Desulfobacterium sp.]
Length = 249
Score = 37.9 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 14/97 (14%), Positives = 40/97 (41%), Gaps = 5/97 (5%)
Query: 93 SEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVL 152
E+ K + + + Q+ I +++ I + +M + +G++G ++
Sbjct: 104 DEFLKKGIQLSIDGLEPQE-IKNILETEIDFIRSRHSLGAEIFVTMGTYAPALGMIGTLI 162
Query: 153 GMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVS 189
G++ QS+ + P + +L++ G ++
Sbjct: 163 GLIQMLQSM----DDPGKIGPSMSVALVTTFYGSIMA 195
>gi|20093506|ref|NP_613353.1| biopolymer transport protein [Methanopyrus kandleri AV19]
gi|19886338|gb|AAM01283.1| Biopolymer transport protein [Methanopyrus kandleri AV19]
Length = 202
Score = 37.9 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 27/168 (16%), Positives = 62/168 (36%), Gaps = 26/168 (15%)
Query: 67 QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
+ LE + + + SE+ + +K I ++ D D A + +
Sbjct: 54 KDLEQIADKFPDVKRLPPH------FSEFLRRVEK-------IVEKSDSA-DEASLKVEK 99
Query: 127 EITEKLSFLGS-------MSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESL 179
E+ +FL S + G ++G++G ++ + + +A + + +I +
Sbjct: 100 ELENLENFLASKVSRTRIVVRLGPMLGLMGTLIPLGPGLEQLAKGNIAGLATS--LITAF 157
Query: 180 ISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEG 227
+ ++GL + + +K +E A IL R+ G
Sbjct: 158 ATTVVGLASAGACYVITLFRSRWYRKDVSDLEFLAE---TILQREFGG 202
>gi|88704269|ref|ZP_01101983.1| chemotaxis motA protein [Congregibacter litoralis KT71]
gi|88701320|gb|EAQ98425.1| chemotaxis motA protein [Congregibacter litoralis KT71]
Length = 267
Score = 37.9 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 18/79 (22%), Positives = 35/79 (44%), Gaps = 4/79 (5%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ I +MDV I L + +M +GI+GAVLG++ ++ S+
Sbjct: 143 EAIRTVMDVEIDNALAKDARAAKVYEAMGGYSPTIGIIGAVLGLIDVMNNL----SDPTQ 198
Query: 171 SIPGIIESLISILLGLCVS 189
GI + ++ + G+ +
Sbjct: 199 LGAGIAVAFVATIYGVGFA 217
>gi|91793510|ref|YP_563161.1| MotA/TolQ/ExbB proton channel [Shewanella denitrificans OS217]
gi|91715512|gb|ABE55438.1| MotA/TolQ/ExbB proton channel [Shewanella denitrificans OS217]
Length = 178
Score = 37.9 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 12/58 (20%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Query: 150 AVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFA 207
++G++ F ++ + V GI +++++ GL +SIP+ + K E ++
Sbjct: 70 TIIGLLDTFSALGH--NPGVSISDGIGKAMLTTQAGLLMSIPAMVILWKLQEQEQELT 125
>gi|172062648|ref|YP_001810299.1| MotA/TolQ/ExbB proton channel [Burkholderia ambifaria MC40-6]
gi|171995165|gb|ACB66083.1| MotA/TolQ/ExbB proton channel [Burkholderia ambifaria MC40-6]
Length = 254
Score = 37.9 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 24/156 (15%), Positives = 52/156 (33%), Gaps = 15/156 (9%)
Query: 38 SWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKK 97
+W+ + +E ++ L K + ++ +S + + +
Sbjct: 52 TWARFFDAVKQLRLAFVRAQEVDRK--HLTDLLEWGDRAKLDGLLAFESMDVSGIHPFAR 109
Query: 98 SCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSM----SSAGLLVGILGAVLG 153
+ + + +++ A+ REL+ + GILG+VLG
Sbjct: 110 RGLELLANGVS-----TAVLEDALHRELDAYERSRLAAARVWHQAGGYAPTFGILGSVLG 164
Query: 154 MMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVS 189
++ I PGI + I+ L GL +
Sbjct: 165 LVQVTSHIL----EPAQLGPGIAVAFIATLYGLAFA 196
>gi|115360212|ref|YP_777350.1| MotA/TolQ/ExbB proton channel [Burkholderia ambifaria AMMD]
gi|115285500|gb|ABI91016.1| MotA/TolQ/ExbB proton channel [Burkholderia ambifaria AMMD]
Length = 254
Score = 37.9 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 24/156 (15%), Positives = 52/156 (33%), Gaps = 15/156 (9%)
Query: 38 SWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKK 97
+W+ + +E ++ L K + ++ +S + + +
Sbjct: 52 TWARFFDAVKQLRLAFVRAQEVDRK--HLTDLLEWGDRAKLDGLLAFESMDVSGIHPFAR 109
Query: 98 SCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSM----SSAGLLVGILGAVLG 153
+ + + +++ A+ REL+ + GILG+VLG
Sbjct: 110 RGLELLANGVS-----TAVLEDALHRELDAYERSRLAAARVWHQAGGYAPTFGILGSVLG 164
Query: 154 MMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVS 189
++ I PGI + I+ L GL +
Sbjct: 165 LVQVTSHIL----EPAQLGPGIAVAFIATLYGLAFA 196
>gi|327438678|dbj|BAK15043.1| flagellar motor component [Solibacillus silvestris StLB046]
Length = 266
Score = 37.9 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 15/98 (15%), Positives = 37/98 (37%), Gaps = 7/98 (7%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
D I ++ + + + +G+LGAV+G++ + + S+
Sbjct: 123 DYIRDVLTEEVEAMEDRHASGAGIFSQAGTYAPTLGVLGAVVGLIAALKDM----SDIDK 178
Query: 171 SIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAM 208
I + ++ LLG+ + ++ F K+ +
Sbjct: 179 LGHAISAAFVATLLGIFTG---YVLWHPFANKLKRKSA 213
>gi|150021175|ref|YP_001306529.1| MotA/TolQ/ExbB proton channel [Thermosipho melanesiensis BI429]
gi|149793696|gb|ABR31144.1| MotA/TolQ/ExbB proton channel [Thermosipho melanesiensis BI429]
Length = 262
Score = 37.9 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 14/79 (17%), Positives = 37/79 (46%), Gaps = 4/79 (5%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ + MM++ I E+ K ++ + G++G ++G++ +S+ ++
Sbjct: 122 EVLKSMMEIEIEVASNEMNLKKGLFEAIGAYAPAFGMIGTLIGLIQMLKSL----NDPNS 177
Query: 171 SIPGIIESLISILLGLCVS 189
P + +LI+ L G ++
Sbjct: 178 LGPSMAVALITTLYGSIMA 196
>gi|154687113|ref|YP_001422274.1| flagellar motor protein MotP [Bacillus amyloliquefaciens FZB42]
gi|154352964|gb|ABS75043.1| YtxD [Bacillus amyloliquefaciens FZB42]
Length = 271
Score = 37.9 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 13/80 (16%), Positives = 34/80 (42%), Gaps = 4/80 (5%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
++ I +MD IA E + G++G ++G++ +++ ++
Sbjct: 126 EETIRLVMDSEIAAMEERHRKGRRVFEKAGDFAPAWGMIGTLVGLVLMLKNL----NDPH 181
Query: 170 VSIPGIIESLISILLGLCVS 189
P + +L++ L G ++
Sbjct: 182 TLGPNMAVALLTTLYGALLA 201
>gi|91793919|ref|YP_563570.1| flagellar motor protein PomA [Shewanella denitrificans OS217]
gi|91715921|gb|ABE55847.1| MotA/TolQ/ExbB proton channel [Shewanella denitrificans OS217]
Length = 255
Score = 37.9 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 14/85 (16%), Positives = 35/85 (41%), Gaps = 8/85 (9%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ + ++ IA E +S + +G++G ++G++ ++ +
Sbjct: 119 EVVRAALEKDIALTEERHKTGISIFRAFGDVAPAMGMIGTLVGLVAMLSNM----DDPKS 174
Query: 171 SIPGIIESLISILLGL----CVSIP 191
P + +L++ L G V+IP
Sbjct: 175 IGPSMAVALLTTLYGAMIANMVAIP 199
>gi|163738050|ref|ZP_02145466.1| chemotaxis protein MotA [Phaeobacter gallaeciensis BS107]
gi|163742554|ref|ZP_02149940.1| flagellar motor protein MotA [Phaeobacter gallaeciensis 2.10]
gi|161384139|gb|EDQ08522.1| flagellar motor protein MotA [Phaeobacter gallaeciensis 2.10]
gi|161388666|gb|EDQ13019.1| chemotaxis protein MotA [Phaeobacter gallaeciensis BS107]
Length = 289
Score = 37.9 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 18/93 (19%), Positives = 39/93 (41%), Gaps = 7/93 (7%)
Query: 97 KSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMG 156
+S P +++ +++ ++ + L L S++ +GI+ AVLG++
Sbjct: 132 RSASMNYDDPHQVEEVLEKRIEANLHHALHSSHA----LQSLADGLPALGIVAAVLGIIK 187
Query: 157 FFQSIAGYYSNNVVSIPGIIESLISILLGLCVS 189
SI V I +L+ LG+ ++
Sbjct: 188 TMGSI---DQPPEVLGKLIGGALVGTFLGVFLA 217
>gi|284041523|ref|YP_003391863.1| MotA/TolQ/ExbB proton channel [Conexibacter woesei DSM 14684]
gi|283945744|gb|ADB48488.1| MotA/TolQ/ExbB proton channel [Conexibacter woesei DSM 14684]
Length = 265
Score = 37.5 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 19/121 (15%), Positives = 43/121 (35%), Gaps = 5/121 (4%)
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
L + + + + L A E+ + + D + +++ I +
Sbjct: 81 LVGIAEQARREGLLALDAQLGDIDDEFTRKGLQLVVDGTD-PDLVREILEAEIDGMVARH 139
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCV 188
+ +GILGAV+G++ ++ S+ P I + I+ L G+
Sbjct: 140 AIGANTFEKAGGYAPTLGILGAVMGLISVLGNL----SDPDSLGPAISVAFIATLYGVGG 195
Query: 189 S 189
+
Sbjct: 196 A 196
>gi|242310592|ref|ZP_04809747.1| motility protein a-flagellar motor [Helicobacter pullorum MIT
98-5489]
gi|239522990|gb|EEQ62856.1| motility protein a-flagellar motor [Helicobacter pullorum MIT
98-5489]
Length = 254
Score = 37.5 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 20/123 (16%), Positives = 48/123 (39%), Gaps = 6/123 (4%)
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPI--GIQDRIDRMMDVAIARELE 126
++ + G+ ++ + E + +G I D I +++ + R LE
Sbjct: 77 IKKLVDYSTQARRDGILSLEQQSNQEENEFLKRGLNMAIDGAEPDSIRDLLETDMDRTLE 136
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGL 186
S + ++ G+LG ++G++ +++ S P + +LI+ L G
Sbjct: 137 RHKSNASIFDTWAAYAGAYGMLGTLIGLVAMLLNMSDPGSI----GPAMAVALITTLYGS 192
Query: 187 CVS 189
+
Sbjct: 193 FIG 195
>gi|323697840|ref|ZP_08109752.1| MotA/TolQ/ExbB proton channel [Desulfovibrio sp. ND132]
gi|323457772|gb|EGB13637.1| MotA/TolQ/ExbB proton channel [Desulfovibrio desulfuricans ND132]
Length = 250
Score = 37.5 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 10/97 (10%), Positives = 41/97 (42%), Gaps = 7/97 (7%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI 172
+ +M++ + + + + M + G++G ++G++ ++ S+
Sbjct: 121 VRSVMEIELEFMKQRHRQGQAVFKGMGTMAPAFGMIGTLIGLVNMLSNL----SDPSSIG 176
Query: 173 PGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQ 209
P + +L++ G +I +++ + ++ + +
Sbjct: 177 PAMAVALLTTFYG---AIMANVMFLPMATKLEERSAE 210
>gi|254522690|ref|ZP_05134745.1| flagellar motor protein [Stenotrophomonas sp. SKA14]
gi|219720281|gb|EED38806.1| flagellar motor protein [Stenotrophomonas sp. SKA14]
Length = 246
Score = 37.5 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 31/197 (15%), Positives = 74/197 (37%), Gaps = 22/197 (11%)
Query: 11 ISIFALFMQ-MGLAVKCIITLLFIFSILS---WSVIIQKSVNFITLRRQFREFEQLF--- 63
+S+ LF+ L I+ + S+ S + ++I ++ I L F+ F
Sbjct: 4 LSLIGLFLALASLVGGSILKGAGLASLWSPAAFVIVIVGTIAAILLHTSPAVFKHAFKIV 63
Query: 64 -WSGQ----SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQ------DR 112
W + + + + NI + S+ + D R + + +
Sbjct: 64 RWVVRPPHSDRRELIQQIVEWSNIARRQGLLGLESQVEAQQDPFLRKGLQLLVDGVEPES 123
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI 172
+ M+++ + + + +M +GI+GAVLG++ +++A +
Sbjct: 124 MRHMLEIELGSQEHQDQAGAKVFEAMGIYAPTLGIIGAVLGLIAVMKNLA----DPSKLG 179
Query: 173 PGIIESLISILLGLCVS 189
GI + + + G+ +
Sbjct: 180 HGIAAAFTATIYGIASA 196
>gi|206603128|gb|EDZ39608.1| Putative flagellar motor component (MotA) [Leptospirillum sp. Group
II '5-way CG']
Length = 260
Score = 37.5 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 14/83 (16%), Positives = 34/83 (40%), Gaps = 11/83 (13%)
Query: 134 FLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSS 193
S +GILGAVLG++ ++ S+ GI + ++ + G+ + +
Sbjct: 148 VFESAGGYAPTIGILGAVLGLIHVMSNL----SDPNKLAEGIATAFVATVYGVGSANLAY 203
Query: 194 I-------AYNKFIEDSKKFAMQ 209
+ N + +++ ++
Sbjct: 204 LPLSGKLKIKNHYEGRNREIIIE 226
>gi|1842124|gb|AAB47573.1| membrane associated protein MotA [Sinorhizobium meliloti]
gi|1870713|gb|AAB48837.1| MotA [Sinorhizobium meliloti]
Length = 292
Score = 37.5 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 20/77 (25%), Positives = 36/77 (46%), Gaps = 3/77 (3%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI 172
I+ +MD I + + + +M A +GI+ AVLG++ +I+ V
Sbjct: 143 IEALMDEEIQTITHDKMKCYHAMTTMGDALPAIGIVAAVLGVIKAMGAIS---EAPEVVG 199
Query: 173 PGIIESLISILLGLCVS 189
I +L+ LLG+ +S
Sbjct: 200 AKIAAALVGTLLGVFLS 216
>gi|256376463|ref|YP_003100123.1| MotA/TolQ/ExbB proton channel [Actinosynnema mirum DSM 43827]
gi|255920766|gb|ACU36277.1| MotA/TolQ/ExbB proton channel [Actinosynnema mirum DSM 43827]
Length = 257
Score = 37.5 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 25/156 (16%), Positives = 56/156 (35%), Gaps = 8/156 (5%)
Query: 67 QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
+S+ ++ + + L + + A + ++ I +++ I +
Sbjct: 79 ESIVSLADRARREGLLALEEEAKKVEDPFLRRGLVLAIDGMDSKE-IREILEGEIETKQR 137
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGL 186
+ M + +GI+G VLG++ +++ S+ I + ++ L G+
Sbjct: 138 YDKVGVKMFTDMGALAPTIGIIGTVLGLIHVLENL----SDPAKLGHLIAGAFVATLWGV 193
Query: 187 CV--SIPSSIAYNKFIEDSKKFAMQMEGFANEFSAI 220
+I I N+ S QME AI
Sbjct: 194 MTANAIWLPIG-NRLKRISDLECEQMEVVVEGVLAI 228
>gi|294084382|ref|YP_003551140.1| MotA/TolQ/ExbB proton channel [Candidatus Puniceispirillum marinum
IMCC1322]
gi|292663955|gb|ADE39056.1| MotA/TolQ/ExbB proton channel [Candidatus Puniceispirillum marinum
IMCC1322]
Length = 254
Score = 37.5 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 9/77 (11%), Positives = 31/77 (40%), Gaps = 4/77 (5%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI 172
+ ++ I + + + +G++G ++G++ ++A +
Sbjct: 121 LTAQLNQEIKAMKMRHESNQNVVKAWIDIAPAMGMIGTLVGLVLMLGNMA----DPKAIG 176
Query: 173 PGIIESLISILLGLCVS 189
P + +L++ L G ++
Sbjct: 177 PAMAVALLTTLYGAFIA 193
>gi|88798990|ref|ZP_01114571.1| Flagellar motor component [Reinekea sp. MED297]
gi|88778217|gb|EAR09411.1| Flagellar motor component [Reinekea sp. MED297]
Length = 244
Score = 37.5 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 25/138 (18%), Positives = 54/138 (39%), Gaps = 11/138 (7%)
Query: 59 FEQLFW-----SGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARS--PIGIQD 111
F +FW S Q+L + + + G ++ + E G + +D
Sbjct: 61 FPAIFWRNHLDSEQTLLKLVRWCQLARRSGPLSLDPESGKEPDPFLRLGLQLIVDGADKD 120
Query: 112 RIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVS 171
++ + +A E + F S+ +GI+GAVLG++ I + +
Sbjct: 121 KLRHNLTIATEARENEWLKGADFFDSLGGYAPTMGIIGAVLGLIQVMTQIEDTQAIGL-- 178
Query: 172 IPGIIESLISILLGLCVS 189
GI + ++ + G+ ++
Sbjct: 179 --GIATAFVATIYGVGLA 194
>gi|332704091|ref|ZP_08424179.1| MotA/TolQ/ExbB proton channel [Desulfovibrio africanus str. Walvis
Bay]
gi|332554240|gb|EGJ51284.1| MotA/TolQ/ExbB proton channel [Desulfovibrio africanus str. Walvis
Bay]
Length = 250
Score = 37.5 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 17/121 (14%), Positives = 41/121 (33%), Gaps = 4/121 (3%)
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
++ + K GL A+ + + + + + +M+ I +
Sbjct: 77 IQQIIKLADTGRREGLLALEKAQVDNDFLRRGVRLVADGSAPNLVRAVMETEIDFMKQRH 136
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCV 188
S M + G++G ++G++ Q++A S +L++ G
Sbjct: 137 RRGQSVFKGMGAMAPAFGMIGTLVGLVQMLQNMADPSSIGSAM----AVALLTTFYGAVA 192
Query: 189 S 189
S
Sbjct: 193 S 193
>gi|301167894|emb|CBW27479.1| putative chemotaxis MotA protein [Bacteriovorax marinus SJ]
Length = 259
Score = 37.5 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 15/93 (16%), Positives = 39/93 (41%), Gaps = 7/93 (7%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ I ++ + I +E M+ G +G++G ++G++ Q++ S+
Sbjct: 121 EVIASILQLEIDAMVERHKVGADVFQGMADDGPAMGMIGTLIGLVQMLQNL----SDPSA 176
Query: 171 SIPGIIESLISILLGLCVSIPSSIAYNKFIEDS 203
P + +L++ G +I +++ N
Sbjct: 177 IGPAMAVALLTTFYG---AIIANVFCNPMKNKI 206
>gi|288959637|ref|YP_003449978.1| chemotaxis protein [Azospirillum sp. B510]
gi|288911945|dbj|BAI73434.1| chemotaxis protein [Azospirillum sp. B510]
Length = 286
Score = 37.5 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 25/130 (19%), Positives = 50/130 (38%), Gaps = 16/130 (12%)
Query: 69 LETVCKSLKNHHNIGLAAIF---------MSAMSEWKKSCDKGARSPIGIQDRIDRMMDV 119
L + + ++ + L F ++ + + + GA +P + D +MD
Sbjct: 94 LLALEQHIEKPEDSPLFQQFPKFYGDHHAIAFLCTYLRLMSLGADNPHELVD----LMDE 149
Query: 120 AIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESL 179
I E + +++ A +GI+ AVLG++ SI V I +L
Sbjct: 150 DIETMHHEHQRISDAIQAVADAVPALGIVAAVLGVIHTMGSIT---EPPEVLGKLIGGAL 206
Query: 180 ISILLGLCVS 189
+ G+ V+
Sbjct: 207 VGTFTGILVA 216
>gi|71279290|ref|YP_268266.1| chemotaxis MotA protein [Colwellia psychrerythraea 34H]
gi|71145030|gb|AAZ25503.1| chemotaxis MotA protein [Colwellia psychrerythraea 34H]
Length = 248
Score = 37.5 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 15/99 (15%), Positives = 38/99 (38%), Gaps = 7/99 (7%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ +++ + E + +M +GILGAVLG++ ++ + +
Sbjct: 122 ENFRVALELDLDIYREHNLRSANVYEAMGGYSPTIGILGAVLGLIHAMSNL----TEPAL 177
Query: 171 SIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQ 209
GI + I+ + G+ + ++ Y + +
Sbjct: 178 LGQGIATAFIATIYGVGFA---NLFYLPIANKIRAIVHE 213
>gi|292493579|ref|YP_003529018.1| MotA/TolQ/ExbB proton channel [Nitrosococcus halophilus Nc4]
gi|291582174|gb|ADE16631.1| MotA/TolQ/ExbB proton channel [Nitrosococcus halophilus Nc4]
Length = 246
Score = 37.5 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 20/116 (17%), Positives = 47/116 (40%), Gaps = 5/116 (4%)
Query: 74 KSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLS 133
K + +GL I + + + + + +D I +++++ I
Sbjct: 86 KIARREGLLGLETIAETEVDRFSRRGLQLLVDGNEPED-IRKILELDIELAERRDLLAAK 144
Query: 134 FLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVS 189
SM +GILGAV+G++ ++A + GI + ++ + G+ ++
Sbjct: 145 VFESMGGYAPTIGILGAVMGLIQVMGNLA----DPSSLGSGIAVAFVATIYGIGLA 196
>gi|238916757|ref|YP_002930274.1| chemotaxis protein MotA [Eubacterium eligens ATCC 27750]
gi|238872117|gb|ACR71827.1| chemotaxis protein MotA [Eubacterium eligens ATCC 27750]
Length = 267
Score = 37.5 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 13/119 (10%), Positives = 44/119 (36%), Gaps = 5/119 (4%)
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
+ + + + L + E+ K + + +++ +
Sbjct: 89 ELSNTARKEGLLALEEVAQGLDDEFMKKGILLIVDGTE-PELVRGILETELVNLDTRHKS 147
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVS 189
+ F + ++ G++G +LG++ ++++ S P + +L++ L G ++
Sbjct: 148 TIGFFDNWAALAPAWGMIGTLLGLVNMLKNLSDSASI----GPNMAVALLTTLYGSLIA 202
>gi|261885040|ref|ZP_06009079.1| ExbB\TolQ family transport protein [Campylobacter fetus subsp.
venerealis str. Azul-94]
Length = 119
Score = 37.5 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 23/147 (15%), Positives = 54/147 (36%), Gaps = 29/147 (19%)
Query: 6 LAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWS 65
L +D+ + + L +++ L ++ ++S++++ + + W
Sbjct: 2 LGFLDL-LLNYLSKSSLVTIIVLSWLSLYFVISFTILFSRYIGLNN------------W- 47
Query: 66 GQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
+ L +I M S+ S K S +++ +DV I+
Sbjct: 48 -----------IKKEQVALESILMGTKSDLVDSSLKKCASGRITKEK----LDVCISLAE 92
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVL 152
T L+ L ++S +G+ G V+
Sbjct: 93 ANATSGLTMLSIIASTSPFIGLFGTVI 119
>gi|284989546|ref|YP_003408100.1| MotA/TolQ/ExbB proton channel [Geodermatophilus obscurus DSM 43160]
gi|284062791|gb|ADB73729.1| MotA/TolQ/ExbB proton channel [Geodermatophilus obscurus DSM 43160]
Length = 256
Score = 37.5 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 21/123 (17%), Positives = 51/123 (41%), Gaps = 5/123 (4%)
Query: 67 QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
Q+L T+ + + + L A + + K + ++ + +++ I+ +
Sbjct: 80 QTLVTLAERARKEGLLALEAQVKAIEDPFLKRGLQMGIDGTDPEE-LRAVLESEISAKKA 138
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGL 186
E F+ +M +GI+G ++G+M ++ SN P I + ++ L G+
Sbjct: 139 EDKVAAKFMNAMGGYAPTIGIVGCIVGLMNVMGNL----SNPEALGPMIAAAFVATLWGV 194
Query: 187 CVS 189
+
Sbjct: 195 MAA 197
>gi|20093420|ref|NP_619495.1| MotA/TolQ/ExbB proton channel family protein [Methanosarcina
acetivorans C2A]
gi|19918793|gb|AAM07975.1| MotA/TolQ/ExbB proton channel family protein [Methanosarcina
acetivorans C2A]
Length = 209
Score = 37.5 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 7/68 (10%), Positives = 29/68 (42%), Gaps = 2/68 (2%)
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGL 186
+ ++L +S+ ++G++G ++ + ++ + I + + ++GL
Sbjct: 115 RMAKRLEHTKIISTVAPMLGLMGTLIPLGPALIGLSQGDLETLAQNLMIAFA--TTVVGL 172
Query: 187 CVSIPSSI 194
+ + +
Sbjct: 173 FSAGIAYV 180
>gi|77464894|ref|YP_354398.1| flagellar motor protein MotA [Rhodobacter sphaeroides 2.4.1]
gi|126463736|ref|YP_001044850.1| flagellar motor protein MotA [Rhodobacter sphaeroides ATCC 17029]
gi|221640815|ref|YP_002527077.1| flagellar motor protein MotA [Rhodobacter sphaeroides KD131]
gi|332559793|ref|ZP_08414115.1| MotA2 [Rhodobacter sphaeroides WS8N]
gi|77389312|gb|ABA80497.1| Flagellar motor protein MotA [Rhodobacter sphaeroides 2.4.1]
gi|126105400|gb|ABN78078.1| flagellar motor protein [Rhodobacter sphaeroides ATCC 17029]
gi|221161596|gb|ACM02576.1| Flagellar motor protein precursor [Rhodobacter sphaeroides KD131]
gi|332277505|gb|EGJ22820.1| MotA2 [Rhodobacter sphaeroides WS8N]
Length = 289
Score = 37.5 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 25/134 (18%), Positives = 50/134 (37%), Gaps = 10/134 (7%)
Query: 97 KSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMG 156
++ P +++ +D+ ++ A L L SM+ A +GI+ AVLG++
Sbjct: 132 RAASMNYDDPNQVEEVLDKRVEKAQHHALHSSHA----LQSMADALPALGIVAAVLGVIK 187
Query: 157 FFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANE 216
SI + I +L+ LG+ ++ + F K + F N
Sbjct: 188 TMGSI---DQPPEILGKMIGGALVGTFLGVFLAY-GIVG--PFATRVKAVVEEDGHFYNL 241
Query: 217 FSAILSRQTEGNIS 230
+L + +
Sbjct: 242 IREVLIANLHNHPA 255
>gi|159045800|ref|YP_001534594.1| flagellar motor protein MotA [Dinoroseobacter shibae DFL 12]
gi|157913560|gb|ABV94993.1| chemotaxis protein MotA [Dinoroseobacter shibae DFL 12]
Length = 289
Score = 37.5 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 21/145 (14%), Positives = 50/145 (34%), Gaps = 12/145 (8%)
Query: 46 SVNFITLRRQFR-EFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGAR 104
I L RQ E+ + I + +++ +S
Sbjct: 84 LFELIRLARQNPVGLEEHIED----PAASNIFSKYPKIMADREAIDLIADTMRSAAMNYD 139
Query: 105 SPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGY 164
P +++ +++ ++ + L +++ +GI+ AVLG++ SI
Sbjct: 140 DPHQVEEVLEKRIESNHEHAMH----GSHALQTVADGLPALGIVAAVLGVIKTMGSI--- 192
Query: 165 YSNNVVSIPGIIESLISILLGLCVS 189
+ I +L+ LG+ ++
Sbjct: 193 DQPPEILGKLIGGALVGTFLGVFLA 217
>gi|83647834|ref|YP_436269.1| flagellar motor protein [Hahella chejuensis KCTC 2396]
gi|83635877|gb|ABC31844.1| Flagellar motor component [Hahella chejuensis KCTC 2396]
Length = 245
Score = 37.5 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 17/99 (17%), Positives = 41/99 (41%), Gaps = 7/99 (7%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ I +M++ + + + +M +GILGAVLG++ + + +
Sbjct: 122 ESIRSIMELELNSREQRELDASKVYEAMGGYAPTLGILGAVLGLIQVMSHL----EDPSM 177
Query: 171 SIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQ 209
PGI + ++ + G+ ++ ++ Y K +
Sbjct: 178 LGPGIATAFVATIYGVALA---NLFYFPIANKLKGIVQE 213
>gi|325523699|gb|EGD01965.1| chemotaxis MotA protein [Burkholderia sp. TJI49]
Length = 254
Score = 37.5 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 26/155 (16%), Positives = 48/155 (30%), Gaps = 13/155 (8%)
Query: 38 SWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKK 97
+W+ + E ++ S L K + ++ +S + + +
Sbjct: 52 TWARFFDAVKQLRLAFVRAAEVDRKHLSA--LLEWGDRAKLDGLLAFESMDVSGIHPFAR 109
Query: 98 S---CDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGM 154
S I+D + R +D L GILG+VLG+
Sbjct: 110 RGIELLANGMSTAVIEDALQRELDAYERSHLAAARVWQQ----AGGYAPTFGILGSVLGL 165
Query: 155 MGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVS 189
+ I PGI + ++ L GL +
Sbjct: 166 VQVTSHIL----EPAQLGPGIAVAFVATLYGLAFA 196
>gi|254492042|ref|ZP_05105219.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Methylophaga thiooxidans DMS010]
gi|224462739|gb|EEF79011.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Methylophaga thiooxydans DMS010]
Length = 254
Score = 37.5 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 10/77 (12%), Positives = 33/77 (42%), Gaps = 4/77 (5%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI 172
+ + + + L + ++ A +G++G ++G++ ++ S+
Sbjct: 121 VKKALLTEMNETLNRHSIGQQIFKAIGDAAPAMGMIGTLVGLVQMLTNM----SDPKSIG 176
Query: 173 PGIIESLISILLGLCVS 189
P + +L++ L G ++
Sbjct: 177 PAMAVALLTTLYGAMLA 193
>gi|89094292|ref|ZP_01167234.1| hypothetical protein MED92_13918 [Oceanospirillum sp. MED92]
gi|89081547|gb|EAR60777.1| hypothetical protein MED92_13918 [Oceanospirillum sp. MED92]
Length = 230
Score = 37.5 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 13/74 (17%), Positives = 33/74 (44%), Gaps = 8/74 (10%)
Query: 145 VGILGAVLGMMGFFQSIAGYYSNNV--------VSIPGIIESLISILLGLCVSIPSSIAY 196
+G+LG V+G + SI+G + ++ G+ ++ + ++GL S+ + Y
Sbjct: 138 LGLLGTVIGFVIMLTSISGLEALDLSDIKQLMQQMTQGMGVAMNTTMVGLVASMLLGLQY 197
Query: 197 NKFIEDSKKFAMQM 210
+ + + +
Sbjct: 198 LMLDRFADRLVVDV 211
>gi|190574216|ref|YP_001972061.1| flagellar motor protein [Stenotrophomonas maltophilia K279a]
gi|190012138|emb|CAQ45761.1| putative flagellar motor proton channel [Stenotrophomonas
maltophilia K279a]
Length = 246
Score = 37.5 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 31/198 (15%), Positives = 74/198 (37%), Gaps = 24/198 (12%)
Query: 11 ISIFALFMQ-MGLAVKCIITLLFIFSILS---WSVIIQKSVNFITLRRQFREFEQLF--- 63
+S+ LF+ L I+ + S+ S + ++I +V I L F+ F
Sbjct: 4 LSLIGLFLALASLVGGSILKGAGLASLWSPAAFVIVIVGTVAAILLHTSPAVFKHAFKIV 63
Query: 64 -WSGQ----SLETVCKSLKNHHNI-------GLAAIFMSAMSEWKKSCDKGARSPIGIQD 111
W + + + + NI GL + + + + + + +
Sbjct: 64 RWVVRPPHSDRRELIQQIVEWSNIARRQGLLGLESQVEAQQDPFLRKGLQLLVDGVE-PE 122
Query: 112 RIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVS 171
+ M+++ + + + +M +GI+GAVLG++ +++A +
Sbjct: 123 SMRHMLEIELGSQEHQDQAGAKVFEAMGIYAPTLGIIGAVLGLIAVMKNLA----DPSKL 178
Query: 172 IPGIIESLISILLGLCVS 189
GI + + + G+ +
Sbjct: 179 GHGIAAAFTATIYGIASA 196
>gi|289208359|ref|YP_003460425.1| MotA/TolQ/ExbB proton channel [Thioalkalivibrio sp. K90mix]
gi|288943990|gb|ADC71689.1| MotA/TolQ/ExbB proton channel [Thioalkalivibrio sp. K90mix]
Length = 247
Score = 37.5 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 20/114 (17%), Positives = 45/114 (39%), Gaps = 5/114 (4%)
Query: 76 LKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFL 135
+ +GL + E+ + + Q I ++++ + T+
Sbjct: 88 ARKEGLLGLETLADEENDEFARKGLQLLVDGSEPQT-IRQILEADLDNREHFDTQGAKVF 146
Query: 136 GSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVS 189
SM +GI+GAV+G+M Q++A + GI + ++ + G+ +
Sbjct: 147 ESMGVYAPTLGIVGAVMGLMAVMQNLA----DPSKLGAGIAAAFVATIYGIASA 196
>gi|297569176|ref|YP_003690520.1| MotA/TolQ/ExbB proton channel [Desulfurivibrio alkaliphilus AHT2]
gi|296925091|gb|ADH85901.1| MotA/TolQ/ExbB proton channel [Desulfurivibrio alkaliphilus AHT2]
Length = 254
Score = 37.5 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 10/79 (12%), Positives = 31/79 (39%), Gaps = 4/79 (5%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ I+ ++ + M ++ G++G ++G++ + +
Sbjct: 119 EFIEEVLQKEVELTQARHLVGNQVFNGMGTSAPAFGMIGTLVGLVQMLSVM----DDPAA 174
Query: 171 SIPGIIESLISILLGLCVS 189
PG+ +L++ L G ++
Sbjct: 175 IGPGMAVALLTTLYGAVLA 193
>gi|89093475|ref|ZP_01166423.1| flagellar motor protein [Oceanospirillum sp. MED92]
gi|89082165|gb|EAR61389.1| flagellar motor protein [Oceanospirillum sp. MED92]
Length = 252
Score = 37.5 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 12/79 (15%), Positives = 33/79 (41%), Gaps = 4/79 (5%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
D + ++ + S S+ G +G++G ++G++ ++ S+
Sbjct: 119 DVVKMLLKKESKLTHDRHEFGASIFASLGDVGPAMGMIGTLVGLVQMLSNM----SDPKS 174
Query: 171 SIPGIIESLISILLGLCVS 189
P + +L++ L G ++
Sbjct: 175 IGPAMAVALLTTLYGAMLA 193
>gi|299535179|ref|ZP_07048503.1| chemotaxis protein motA [Lysinibacillus fusiformis ZC1]
gi|298729300|gb|EFI69851.1| chemotaxis protein motA [Lysinibacillus fusiformis ZC1]
Length = 267
Score = 37.5 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 16/98 (16%), Positives = 38/98 (38%), Gaps = 7/98 (7%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
D I ++ + E T + + +G+LGAV+G++ + ++
Sbjct: 123 DYIRDVLTEEVEAMEERHTSGAAIFTQAGTYAPTLGVLGAVVGLIAALADM----NDIEK 178
Query: 171 SIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAM 208
I + ++ LLG+ + ++ F K+ +
Sbjct: 179 LGHAISAAFMATLLGIFTG---YVLWHPFANKLKRKSA 213
>gi|20089242|ref|NP_615317.1| MotA/TolQ/ExbB proton channel family protein [Methanosarcina
acetivorans C2A]
gi|19914121|gb|AAM03797.1| MotA/TolQ/ExbB proton channel family protein [Methanosarcina
acetivorans C2A]
Length = 209
Score = 37.5 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 7/68 (10%), Positives = 29/68 (42%), Gaps = 2/68 (2%)
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGL 186
+ ++L +S+ ++G++G ++ + ++ + I + + ++GL
Sbjct: 115 RMAKRLEHTKIISTVAPMLGLMGTLIPLGPALIGLSQGDLETLAQNLMIAFA--TTVVGL 172
Query: 187 CVSIPSSI 194
+ + +
Sbjct: 173 FSAGIAYV 180
>gi|262274768|ref|ZP_06052579.1| Flagellar motor rotation protein MotA [Grimontia hollisae CIP
101886]
gi|262221331|gb|EEY72645.1| Flagellar motor rotation protein MotA [Grimontia hollisae CIP
101886]
Length = 253
Score = 37.5 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 15/111 (13%), Positives = 41/111 (36%), Gaps = 5/111 (4%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ + + I E F +++ +G++G ++G++ ++ +
Sbjct: 119 EVVKMTLQKDITMTDERHDAGAQFYTALADVAPAMGMIGTLIGLVAMLSNM----DDPKA 174
Query: 171 SIPGIIESLISILLG-LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAI 220
P + +L++ L G + ++ + NK + M + AI
Sbjct: 175 IGPAMAVALLTTLYGAMLANMVAIPIANKLRLRKDQEKMNRRLIMDGLLAI 225
>gi|153840269|ref|ZP_01992936.1| chemotaxis protein PomA [Vibrio parahaemolyticus AQ3810]
gi|149746071|gb|EDM57201.1| chemotaxis protein PomA [Vibrio parahaemolyticus AQ3810]
Length = 187
Score = 37.5 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 12/75 (16%), Positives = 30/75 (40%), Gaps = 4/75 (5%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
D + + IA E T+ + +G++G ++G++ ++ +
Sbjct: 53 DVVRAALQKDIALTDERHTQGTGVFRAFGDVAPAMGMIGTLVGLVAMLSNM----DDPKA 108
Query: 171 SIPGIIESLISILLG 185
P + +L++ L G
Sbjct: 109 IGPAMAVALLTTLYG 123
>gi|268323418|emb|CBH37006.1| hypothetical membrane protein, MotA/TolQ/ExbB proton channel family
[uncultured archaeon]
gi|268324053|emb|CBH37641.1| hypothetical membrane protein, MotA/TolQ/ExbB proton channel family
[uncultured archaeon]
Length = 205
Score = 37.5 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 32/216 (14%), Positives = 72/216 (33%), Gaps = 32/216 (14%)
Query: 9 MDIS---IFALFMQMGLAVKCIITLLFIFSILSWSVI---------IQKSVNFITLRRQF 56
MD S I A+FM + +I +L +++WS+I ++ + L+
Sbjct: 1 MDASAGIIGAMFMISNSLLYPVIIILLG--LVAWSLISVGQFLSEYASRNRDIAKLKAGC 58
Query: 57 REFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRM 116
R + Q L + L F++ + E + + +QD R+
Sbjct: 59 RNAHEHIQK-QEYNKAADVLNASGSNDLLKNFIADLVESLRESKFSVEAEKLLQDYELRI 117
Query: 117 MDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII 176
L ++ G + G++G ++ + + + ++
Sbjct: 118 TKELEKARL------------VAKLGPMFGLMGTLIPLGPALMGL--TSGDIQQLATNMV 163
Query: 177 ESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEG 212
+ + +LGL IAY + + + +
Sbjct: 164 VAFSTTVLGLLSG---GIAYAIVVVKKRWYTQDLSD 196
>gi|302392385|ref|YP_003828205.1| MotA/TolQ/ExbB proton channel [Acetohalobium arabaticum DSM 5501]
gi|302204462|gb|ADL13140.1| MotA/TolQ/ExbB proton channel [Acetohalobium arabaticum DSM 5501]
Length = 271
Score = 37.5 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 11/80 (13%), Positives = 30/80 (37%), Gaps = 4/80 (5%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
+ + +++ +A E +M G++G ++G++ + N
Sbjct: 122 SELVRSILETELAFLEERHATSRGIFETMGELSPAFGMMGTLVGLIQMLSKL----ENPE 177
Query: 170 VSIPGIIESLISILLGLCVS 189
G+ +LI+ G ++
Sbjct: 178 NVGGGLATALITTFYGTVMA 197
>gi|302037672|ref|YP_003797994.1| flagellar motor protein MotA [Candidatus Nitrospira defluvii]
gi|300605736|emb|CBK42069.1| Flagellar motor protein MotA [Candidatus Nitrospira defluvii]
Length = 256
Score = 37.5 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 13/52 (25%), Positives = 25/52 (48%), Gaps = 4/52 (7%)
Query: 138 MSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVS 189
VGILGAVLG++ +++A + GI + ++ + G+ +
Sbjct: 149 AGGYAPTVGILGAVLGLIHVMENLA----DPSKLGGGIAVAFVATVYGVGAA 196
>gi|255021390|ref|ZP_05293438.1| Flagellar motor rotation protein MotA [Acidithiobacillus caldus
ATCC 51756]
gi|254969253|gb|EET26767.1| Flagellar motor rotation protein MotA [Acidithiobacillus caldus
ATCC 51756]
Length = 247
Score = 37.1 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 15/76 (19%), Positives = 31/76 (40%), Gaps = 7/76 (9%)
Query: 134 FLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSS 193
S +GILGAVLG++ +++A + GI + ++ + G+ + +
Sbjct: 145 VFESAGGYAPTIGILGAVLGLIHVMENLA----DPAKLGAGIATAFVATIYGVGSA---N 197
Query: 194 IAYNKFIEDSKKFAMQ 209
+ + K Q
Sbjct: 198 LFFLPVSNKIKGIVHQ 213
>gi|169825895|ref|YP_001696053.1| chemotaxis protein motA [Lysinibacillus sphaericus C3-41]
gi|168990383|gb|ACA37923.1| Chemotaxis protein motA (Motility protein A) [Lysinibacillus
sphaericus C3-41]
Length = 248
Score = 37.1 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 15/98 (15%), Positives = 37/98 (37%), Gaps = 7/98 (7%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
D I ++ + E + + +G+LGAV+G++ + ++
Sbjct: 104 DYIRDVLTEEVEAMEERHASGSAIFTQAGTYAPTLGVLGAVVGLIAALADM----NDIEK 159
Query: 171 SIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAM 208
I + ++ LLG+ + ++ F K+ +
Sbjct: 160 LGHAISAAFMATLLGIFTG---YVLWHPFANKLKRKSA 194
>gi|51246517|ref|YP_066401.1| flagellar motor apparatus (MotA) [Desulfotalea psychrophila LSv54]
gi|50877554|emb|CAG37394.1| related to flagellar motor apparatus (MotA) [Desulfotalea
psychrophila LSv54]
Length = 255
Score = 37.1 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 10/79 (12%), Positives = 33/79 (41%), Gaps = 4/79 (5%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ + RM+ I + +++ +G++G ++G++ Q++ +
Sbjct: 121 ETLRRMLMTEIDYIQVRHEKGGDIFNALALYAPAMGMVGTLIGLVQMLQTM----DDPST 176
Query: 171 SIPGIIESLISILLGLCVS 189
P + +L++ G ++
Sbjct: 177 IGPAMAVALLTTFYGAVIA 195
>gi|152976911|ref|YP_001376428.1| flagellar motor protein MotA [Bacillus cereus subsp. cytotoxis NVH
391-98]
gi|152025663|gb|ABS23433.1| MotA/TolQ/ExbB proton channel [Bacillus cytotoxicus NVH 391-98]
Length = 264
Score = 37.1 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 13/98 (13%), Positives = 41/98 (41%), Gaps = 7/98 (7%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ ++R+++ + E + + + +G+LGAV+G++ ++ ++
Sbjct: 124 EDLERILEAELEAMEERHAKGAAIFSQAGTYAPTLGVLGAVIGLVAALGNL----TDIEK 179
Query: 171 SIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAM 208
I + I+ + G+ + ++ F K+ +
Sbjct: 180 LGHAISGAFIATIFGIFSG---YVLWHPFANKLKQKSA 214
>gi|304405742|ref|ZP_07387400.1| MotA/TolQ/ExbB proton channel [Paenibacillus curdlanolyticus YK9]
gi|304344985|gb|EFM10821.1| MotA/TolQ/ExbB proton channel [Paenibacillus curdlanolyticus YK9]
Length = 267
Score = 37.1 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 16/100 (16%), Positives = 37/100 (37%), Gaps = 7/100 (7%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
QD + ++ I+ + +G+LGAV+G++ + S+
Sbjct: 123 QDFVRDVLLEDISATEDRHKSGALIFSQAGMYAPTLGVLGAVIGLIAALADM----SDME 178
Query: 170 VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQ 209
I + I+ LLG+ + ++ K+ + +
Sbjct: 179 KLSHAIAAAFIATLLGIFTG---YVLWHPISNKLKRLSKR 215
>gi|256370965|ref|YP_003108789.1| MotA/TolQ/ExbB proton channel [Acidimicrobium ferrooxidans DSM
10331]
gi|256007549|gb|ACU53116.1| MotA/TolQ/ExbB proton channel [Acidimicrobium ferrooxidans DSM
10331]
Length = 267
Score = 37.1 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 27/186 (14%), Positives = 63/186 (33%), Gaps = 15/186 (8%)
Query: 13 IFALFMQMGLAVKCII---TLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSL 69
+ ++ M G I +L + + S+ ++ + R + S
Sbjct: 17 LVSMIMDGGNPAALIAPSAMILVLVGTVGVSLAGRRLKEIGQIVGALRSA--ILAKAPSA 74
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQ------DRIDRMMDVAIAR 123
E L + + ++ + K D RS + + D+I +++ +
Sbjct: 75 EESVGQLVHFAEMARREGVLALEAAAKDLTDPFMRSGMQLIIDGVEGDKIREILEADLEG 134
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISIL 183
F M+ +GILG V+G++ +++ + P I + + L
Sbjct: 135 MGTRHRAGAKFFKDMAGFAPTLGILGTVMGLIHVLANLSSPQT----LGPAISGAFTATL 190
Query: 184 LGLCVS 189
G+ +
Sbjct: 191 WGVMTA 196
>gi|170748395|ref|YP_001754655.1| MotA/TolQ/ExbB proton channel [Methylobacterium radiotolerans JCM
2831]
gi|170654917|gb|ACB23972.1| MotA/TolQ/ExbB proton channel [Methylobacterium radiotolerans JCM
2831]
Length = 287
Score = 37.1 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 19/77 (24%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI 172
ID +MD + +E +S + S++ +GI+ AVLG++ +I V
Sbjct: 143 IDALMDEELETHHQEQERVVSAMQSLADGTPALGIVAAVLGVIKTMGAI---KEPPEVLG 199
Query: 173 PGIIESLISILLGLCVS 189
I +L+ G+ V+
Sbjct: 200 HLIGGALVGTFFGVFVA 216
>gi|312622680|ref|YP_004024293.1| mota/tolq/exbb proton channel [Caldicellulosiruptor kronotskyensis
2002]
gi|312203147|gb|ADQ46474.1| MotA/TolQ/ExbB proton channel [Caldicellulosiruptor kronotskyensis
2002]
Length = 265
Score = 37.1 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 21/151 (13%), Positives = 56/151 (37%), Gaps = 11/151 (7%)
Query: 46 SVNFITLRRQFREFEQLFWSGQ-SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGAR 104
S ++ + F+ +F + +V + L + ++ E + +
Sbjct: 50 SFPMSQIKTAVKHFKMVFMDKKIDFASVVEQLVQLSDRARKEGLLALEQEIPNIQNPLLK 109
Query: 105 SPIGIQ------DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFF 158
+G+ + I ++D + +E+ E + +GI+G V+G++
Sbjct: 110 KGLGLVVDGIEGEVIRDILDREVYLAEDELKEAAEVFEAAGGYSPTMGIIGTVMGLISVL 169
Query: 159 QSIAGYYSNNVVSIPGIIESLISILLGLCVS 189
++ +N P I + ++ L G+ +
Sbjct: 170 SNL----TNPDELGPAIAVAFVATLYGVSSA 196
>gi|301166646|emb|CBW26222.1| putative membrane protein [Bacteriovorax marinus SJ]
Length = 248
Score = 37.1 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 15/81 (18%), Positives = 36/81 (44%), Gaps = 4/81 (4%)
Query: 143 LLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIED 202
+G +G VLG+ IA V++ + + + L+ L +SI Y+ + +
Sbjct: 168 PSIGFVGTVLGISQALM-IANSGDMEVITAT-LGVAFDTTLVSLLLSIIIMWYYHALLRE 225
Query: 203 SKKFAMQMEGFANEFSAILSR 223
+ +++ + E +++R
Sbjct: 226 NDLLHAKIKDYVIE--NLINR 244
>gi|20807042|ref|NP_622213.1| flagellar motor component [Thermoanaerobacter tengcongensis MB4]
gi|20515529|gb|AAM23817.1| Flagellar motor component [Thermoanaerobacter tengcongensis MB4]
Length = 273
Score = 37.1 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 17/80 (21%), Positives = 32/80 (40%), Gaps = 4/80 (5%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
+ I M+ I E + ++ + +GI+G V+G++ SI S
Sbjct: 127 MELIKTTMENKIYMEDMQAKKEAGIFEAAGGYAPTMGIIGTVMGLVHVLSSI----SEPE 182
Query: 170 VSIPGIIESLISILLGLCVS 189
P I + I+ L G+ +
Sbjct: 183 KLGPAIAMAFIATLYGVSSA 202
>gi|52842008|ref|YP_095807.1| flagellar motor protein [Legionella pneumophila subsp. pneumophila
str. Philadelphia 1]
gi|54297694|ref|YP_124063.1| flagellar motor protein [Legionella pneumophila str. Paris]
gi|52629119|gb|AAU27860.1| flagellar motor protein MotA [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|53751479|emb|CAH12897.1| flagellar motor protein MotA [Legionella pneumophila str. Paris]
gi|307610481|emb|CBX00053.1| flagellar motor protein MotA [Legionella pneumophila 130b]
Length = 257
Score = 37.1 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 16/77 (20%), Positives = 35/77 (45%), Gaps = 4/77 (5%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI 172
+ ++++ I R + SM +GILGAVLG++ +++A +
Sbjct: 124 LRQVLEAEIDRTEHQDLRAAHVFESMGGYSPTIGILGAVLGLIQVMRNLADPSQLGL--- 180
Query: 173 PGIIESLISILLGLCVS 189
GI + ++ + G+ +
Sbjct: 181 -GIAVAFVATIYGVGFA 196
>gi|307265591|ref|ZP_07547145.1| MotA/TolQ/ExbB proton channel [Thermoanaerobacter wiegelii Rt8.B1]
gi|326389647|ref|ZP_08211213.1| MotA/TolQ/ExbB proton channel [Thermoanaerobacter ethanolicus JW
200]
gi|306919389|gb|EFN49609.1| MotA/TolQ/ExbB proton channel [Thermoanaerobacter wiegelii Rt8.B1]
gi|325994362|gb|EGD52788.1| MotA/TolQ/ExbB proton channel [Thermoanaerobacter ethanolicus JW
200]
Length = 273
Score = 37.1 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 17/80 (21%), Positives = 32/80 (40%), Gaps = 4/80 (5%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
+ I M+ I E E ++ S +GI+G V+G++ ++ S
Sbjct: 127 MELIRTTMENKIYIEDMEAKKEAGIFESAGGYAPTMGIIGTVMGLVHVLSNL----SEPD 182
Query: 170 VSIPGIIESLISILLGLCVS 189
P I + I+ L G+ +
Sbjct: 183 KLGPSIAVAFIATLYGVSSA 202
>gi|114571063|ref|YP_757743.1| flagellar motor protein MotA [Maricaulis maris MCS10]
gi|114341525|gb|ABI66805.1| MotA/TolQ/ExbB proton channel [Maricaulis maris MCS10]
Length = 290
Score = 37.1 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 21/134 (15%), Positives = 47/134 (35%), Gaps = 10/134 (7%)
Query: 97 KSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMG 156
+ P ++D +++ ++ + + +M+ +GI+ AVLG++
Sbjct: 133 RMMTMNLEDPHQVEDAMEKQLEKHHHEAADPAHA----MQTMADGLPALGIVAAVLGVIK 188
Query: 157 FFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANE 216
+I S V I +L+ LG+ ++ F + + F
Sbjct: 189 TMGAI---ESPPAVLGGYIGGALVGTFLGVFIA---YGFVGPFAAYMQAVYDEEHSFYKI 242
Query: 217 FSAILSRQTEGNIS 230
+L GN +
Sbjct: 243 IQDVLVAHLHGNAA 256
>gi|302848551|ref|XP_002955807.1| pyruvate phosphate dikinase [Volvox carteri f. nagariensis]
gi|300258775|gb|EFJ43008.1| pyruvate phosphate dikinase [Volvox carteri f. nagariensis]
Length = 887
Score = 37.1 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 25/151 (16%), Positives = 49/151 (32%), Gaps = 22/151 (14%)
Query: 48 NFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMS--AMSEWKKSCDKGARS 105
+RR E E + LKN IF + M + D
Sbjct: 573 RIAAVRRMIAEEE---LDSDHKLEALEDLKNFQRRDFEGIFTAMDGMPVTIRLLDPPLHE 629
Query: 106 ----PIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMG----F 157
D + + + +E + +L+ L + ++G+ G LG++
Sbjct: 630 FLPQEGSAMDALCAQLASELHTTVERVEARLNGLREV---NPMMGLRGCRLGIVHPEITE 686
Query: 158 FQSIAGYYSNNVVSIPG------IIESLISI 182
Q++A + + V G I+ L++
Sbjct: 687 MQAMAIFEAATAVVKAGGHVHPHIMVPLVAT 717
>gi|213162505|ref|ZP_03348215.1| biopolymer transport protein ExbB [Salmonella enterica subsp.
enterica serovar Typhi str. E00-7866]
Length = 36
Score = 37.1 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 5/36 (13%), Positives = 15/36 (41%)
Query: 112 RIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGI 147
R ++ +A ++ +L ++ + VG+
Sbjct: 1 RTSFRLERRVAAVGRQMGRGNGYLATIGAISPFVGL 36
>gi|260429107|ref|ZP_05783084.1| lateral flagellar motor protein MotA [Citreicella sp. SE45]
gi|260419730|gb|EEX12983.1| lateral flagellar motor protein MotA [Citreicella sp. SE45]
Length = 289
Score = 37.1 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 21/113 (18%), Positives = 42/113 (37%), Gaps = 10/113 (8%)
Query: 97 KSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMG 156
+S P +++ +D+ ++ L L S + A +GI+ AVLG++
Sbjct: 132 RSMSMNYDDPHQVEEVLDKRIEALQHHRLHSSHA----LQSTADALPALGIVAAVLGVIK 187
Query: 157 FFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQ 209
+I V I +L+ LG+ ++ + F K +
Sbjct: 188 TMAAI---DQPPEVLGKMIGGALVGTFLGVFLA---YGFFGPFAGKVKSVVEE 234
>gi|317153384|ref|YP_004121432.1| MotA/TolQ/ExbB proton channel [Desulfovibrio aespoeensis Aspo-2]
gi|316943635|gb|ADU62686.1| MotA/TolQ/ExbB proton channel [Desulfovibrio aespoeensis Aspo-2]
Length = 250
Score = 37.1 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 10/77 (12%), Positives = 33/77 (42%), Gaps = 4/77 (5%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI 172
+ +M++ + + + S M + G++G ++G++ ++ S+
Sbjct: 121 VRSVMEIELDFMRQRHRQGQSVFKGMGTMAPAFGMIGTLIGLVNMLSNL----SDPSSIG 176
Query: 173 PGIIESLISILLGLCVS 189
P + +L++ G ++
Sbjct: 177 PAMAVALLTTFYGAVLA 193
>gi|289675558|ref|ZP_06496448.1| MotA/TolQ/ExbB proton channel [Pseudomonas syringae pv. syringae
FF5]
Length = 40
Score = 37.1 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 10/33 (30%), Positives = 20/33 (60%)
Query: 22 LAVKCIITLLFIFSILSWSVIIQKSVNFITLRR 54
L + + LL IFS+++W++++ K+ L R
Sbjct: 8 LITQSSMALLVIFSLVTWALLLGKTFQHWRLTR 40
>gi|281421808|ref|ZP_06252807.1| MotA/TolQ/ExbB proton channel family protein [Prevotella copri DSM
18205]
gi|281404050|gb|EFB34730.1| MotA/TolQ/ExbB proton channel family protein [Prevotella copri DSM
18205]
Length = 196
Score = 37.1 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 15/109 (13%), Positives = 48/109 (44%), Gaps = 9/109 (8%)
Query: 117 MDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-I 175
++ + + + + + LS ++ G ++G++G ++ M ++ + ++ S+ +
Sbjct: 95 VNRILDQYTQFVEKDLSLPSTLLKMGPMLGLMGTLIPMGPALVGLS---TGDIASMAYNM 151
Query: 176 IESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
+ + ++GL + +I + ++ + M EF A L +
Sbjct: 152 QVAFATTVVGLFSA---AIGFVTKQTKNRWYTEDMSNL--EFMADLLEE 195
>gi|254479610|ref|ZP_05092918.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Carboxydibrachium pacificum DSM 12653]
gi|214034453|gb|EEB75219.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Carboxydibrachium pacificum DSM 12653]
Length = 271
Score = 37.1 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 17/80 (21%), Positives = 32/80 (40%), Gaps = 4/80 (5%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
+ I M+ I E + ++ + +GI+G V+G++ SI S
Sbjct: 125 MELIKTTMENKIYMEDMQAKKEAGIFEAAGGYAPTMGIIGTVMGLVHVLSSI----SEPE 180
Query: 170 VSIPGIIESLISILLGLCVS 189
P I + I+ L G+ +
Sbjct: 181 KLGPAIAMAFIATLYGVSSA 200
>gi|87309286|ref|ZP_01091422.1| probable biopolymer transport protein [Blastopirellula marina DSM
3645]
gi|87287925|gb|EAQ79823.1| probable biopolymer transport protein [Blastopirellula marina DSM
3645]
Length = 419
Score = 37.1 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 18/137 (13%), Positives = 43/137 (31%), Gaps = 15/137 (10%)
Query: 65 SGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARE 124
+ L+ + + + L + G + + +E
Sbjct: 77 AAGLLDQLEEYPQRLQRHSLWRRLFQGIEHVH---------VNGSAAGLQEELKYFADQE 127
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYY------SNNVVSIPGIIES 178
E + S + + A ++G LG V+G+ +++ + + G+ +
Sbjct: 128 AERAYQSFSLVRIVIWATPMLGFLGTVIGITLALGNLSPEALVNEPKAAMESLLAGLSVA 187
Query: 179 LISILLGLCVSIPSSIA 195
+ L L +SI A
Sbjct: 188 FDTTALALSLSIFLMFA 204
>gi|312127874|ref|YP_003992748.1| mota/tolq/exbb proton channel [Caldicellulosiruptor hydrothermalis
108]
gi|311777893|gb|ADQ07379.1| MotA/TolQ/ExbB proton channel [Caldicellulosiruptor hydrothermalis
108]
Length = 265
Score = 37.1 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 21/151 (13%), Positives = 56/151 (37%), Gaps = 11/151 (7%)
Query: 46 SVNFITLRRQFREFEQLFWSGQ-SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGAR 104
S ++ + F+ +F + +V + L + ++ E + +
Sbjct: 50 SFPMSQIKTAVKHFKLVFMDKKIDFASVVEQLVQLSDRARKEGLLALEQEIPNIQNPLLK 109
Query: 105 SPIGIQ------DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFF 158
+G+ + I ++D + +E+ E + +GI+G V+G++
Sbjct: 110 KGLGLVVDGIEGEVIRDILDREVYLAEDELKEAAEVFEAAGGYAPTMGIIGTVMGLISVL 169
Query: 159 QSIAGYYSNNVVSIPGIIESLISILLGLCVS 189
++ +N P I + ++ L G+ +
Sbjct: 170 SNL----TNPDELGPAIAVAFVATLYGVSSA 196
>gi|148359325|ref|YP_001250532.1| flagellar motor protein MotA [Legionella pneumophila str. Corby]
gi|296107372|ref|YP_003619072.1| chemotaxis protein MotA [Legionella pneumophila 2300/99 Alcoy]
gi|148281098|gb|ABQ55186.1| flagellar motor protein MotA [Legionella pneumophila str. Corby]
gi|295649273|gb|ADG25120.1| chemotaxis protein MotA [Legionella pneumophila 2300/99 Alcoy]
Length = 257
Score = 37.1 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 16/77 (20%), Positives = 35/77 (45%), Gaps = 4/77 (5%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI 172
+ ++++ I R + SM +GILGAVLG++ +++A +
Sbjct: 124 LRQVLEAEIDRTEHQDLRAAHVFESMGGYSPTIGILGAVLGLIQVMRNLADPSQLGL--- 180
Query: 173 PGIIESLISILLGLCVS 189
GI + ++ + G+ +
Sbjct: 181 -GIAVAFVATIYGVGFA 196
>gi|54294668|ref|YP_127083.1| flagellar motor protein [Legionella pneumophila str. Lens]
gi|53754500|emb|CAH15984.1| flagellar motor protein MotA [Legionella pneumophila str. Lens]
Length = 257
Score = 37.1 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 17/77 (22%), Positives = 35/77 (45%), Gaps = 4/77 (5%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI 172
+ ++++ I R + SM VGILGAVLG++ +++A +
Sbjct: 124 LRQVLEAEIDRTEHQDLRAAHVFESMGGYSPTVGILGAVLGLIQVMRNLADPSQLGL--- 180
Query: 173 PGIIESLISILLGLCVS 189
GI + ++ + G+ +
Sbjct: 181 -GIAVAFVATIYGVGFA 196
>gi|148256647|ref|YP_001241232.1| hypothetical protein BBta_5348 [Bradyrhizobium sp. BTAi1]
gi|146408820|gb|ABQ37326.1| putative membrane protein of unknown function [Bradyrhizobium sp.
BTAi1]
Length = 259
Score = 37.1 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 28/163 (17%), Positives = 57/163 (34%), Gaps = 16/163 (9%)
Query: 63 FWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSP-------IGIQDRIDR 115
FW +++ + + + + A A+ + KG + R
Sbjct: 72 FWRTRAIAREADAARRCRAVLIGADAERALEPDAQLLPKGLVTNHIYSLVTKARTQGAGR 131
Query: 116 MMDVAIARELEEITEKLSFLGSMSSAGLL-VGILGAVLGMMGFFQSIAG--------YYS 166
+ + R L + + G +S L+ +G+LG ++G + IAG S
Sbjct: 132 LDQTLLLRTLADRLRGSNGFGGFASDTLMKLGLLGTIIGFIIMLAPIAGLDVNDKLAMKS 191
Query: 167 NNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQ 209
+ + G+ ++ + L GL SI I Y + +
Sbjct: 192 SMGLMSDGMAVAMYTTLAGLVGSILVRIQYYMLDAATGRVFSD 234
>gi|134292849|ref|YP_001116585.1| MotA/TolQ/ExbB proton channel [Burkholderia vietnamiensis G4]
gi|134136006|gb|ABO57120.1| MotA/TolQ/ExbB proton channel [Burkholderia vietnamiensis G4]
Length = 254
Score = 37.1 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 24/155 (15%), Positives = 49/155 (31%), Gaps = 13/155 (8%)
Query: 38 SWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKK 97
+W+ + +E ++ L K + + ++ ++ + + +
Sbjct: 52 TWARFFDAVKQLRLAFVRAQEVDRK--HLSDLLEWGDRAKLNGLLAFESMDVTGIHPFAR 109
Query: 98 S---CDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGM 154
S ++D + R +D L GILG+VLG+
Sbjct: 110 RGLELLANGVSSAVLEDALQRELDAYERSRLAAARVWHQ----AGGYAPTFGILGSVLGL 165
Query: 155 MGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVS 189
+ I PGI + I+ L GL +
Sbjct: 166 VQVTSHIL----EPAQLGPGIAVAFIATLYGLAFA 196
>gi|12214187|emb|CAA11955.2| motA protein [Sinorhizobium meliloti]
Length = 292
Score = 37.1 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 20/77 (25%), Positives = 36/77 (46%), Gaps = 3/77 (3%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI 172
I+ +MD I + + + +M A +GI+ AVLG++ +I+ V
Sbjct: 143 IEALMDEEIQTITHDKMKCYHAMTTMGDALPAIGIVAAVLGVIKAMGAIS---EAPEVLG 199
Query: 173 PGIIESLISILLGLCVS 189
I +L+ LLG+ +S
Sbjct: 200 AKIAAALVGTLLGVFLS 216
>gi|325110151|ref|YP_004271219.1| MotA/TolQ/ExbB proton channel [Planctomyces brasiliensis DSM 5305]
gi|324970419|gb|ADY61197.1| MotA/TolQ/ExbB proton channel [Planctomyces brasiliensis DSM 5305]
Length = 432
Score = 37.1 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 27/182 (14%), Positives = 62/182 (34%), Gaps = 21/182 (11%)
Query: 18 MQMGLAVKC--------IITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLF-----W 64
Q L V+ + LF + + +I + + + + L
Sbjct: 38 WQQDLLVRYCTSHPLEYVTMALFFLGMAT---LILRRIELAGEQSALTQLLSLVGKVFDK 94
Query: 65 SGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDK-GARSPIGIQDRIDRMMDVAIAR 123
S + L+ ++L I L I ++ + + DR+D +
Sbjct: 95 SSEKLDERAETLG--REIELRRIETGKSVAGRRVAEALHYVDQMKSGDRLDEHLRHLSDL 152
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYY--SNNVVSIPGIIESLIS 181
E + ++L F+ ++S A ++G LG V+G+ ++ + G+ + +
Sbjct: 153 EADAAAQRLGFVNTISWAVPILGFLGTVMGITLAIANVTPDQLDKSLPEVTGGLAVAFDT 212
Query: 182 IL 183
Sbjct: 213 TA 214
>gi|239628982|ref|ZP_04672013.1| YtxD [Clostridiales bacterium 1_7_47_FAA]
gi|239519128|gb|EEQ58994.1| YtxD [Clostridiales bacterium 1_7_47FAA]
Length = 286
Score = 37.1 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 13/80 (16%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
+++ + M+ + + E F +S G++G ++G++ ++ S+
Sbjct: 128 SEKVRKAMETELEQLDERHALDRRFYEKAASYAPAFGMIGTLVGLILMLGNM----SDVD 183
Query: 170 VSIPGIIESLISILLGLCVS 189
G+ +LI+ L G ++
Sbjct: 184 ALAKGMAVALITTLYGSLLA 203
>gi|15964407|ref|NP_384760.1| flagellar motor protein MotA [Sinorhizobium meliloti 1021]
gi|307311549|ref|ZP_07591190.1| flagellar motor protein MotA [Sinorhizobium meliloti BL225C]
gi|307318904|ref|ZP_07598335.1| flagellar motor protein MotA [Sinorhizobium meliloti AK83]
gi|17380459|sp|P97215|MOTA_RHIME RecName: Full=Motility protein A; AltName: Full=Chemotaxis protein
MotA
gi|15073584|emb|CAC45226.1| Chemotaxis (motility protein A) transmembrane [Sinorhizobium
meliloti 1021]
gi|306895318|gb|EFN26073.1| flagellar motor protein MotA [Sinorhizobium meliloti AK83]
gi|306899566|gb|EFN30195.1| flagellar motor protein MotA [Sinorhizobium meliloti BL225C]
Length = 292
Score = 37.1 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 20/77 (25%), Positives = 36/77 (46%), Gaps = 3/77 (3%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI 172
I+ +MD I + + + +M A +GI+ AVLG++ +I+ V
Sbjct: 143 IEALMDEEIQTITHDKMKCYHAMTTMGDALPAIGIVAAVLGVIKAMGAIS---EAPEVLG 199
Query: 173 PGIIESLISILLGLCVS 189
I +L+ LLG+ +S
Sbjct: 200 AKIAAALVGTLLGVFLS 216
>gi|332307429|ref|YP_004435280.1| MotA/TolQ/ExbB proton channel [Glaciecola agarilytica 4H-3-7+YE-5]
gi|332174758|gb|AEE24012.1| MotA/TolQ/ExbB proton channel [Glaciecola agarilytica 4H-3-7+YE-5]
Length = 254
Score = 37.1 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 14/121 (11%), Positives = 40/121 (33%), Gaps = 4/121 (3%)
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+E + + G A+ + + D + + I+ E
Sbjct: 77 IEKIVEMADAARKGGFLALEEAQIENEFMQKGVDMLVDGHDVDVVRATLAKDISMTTERH 136
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCV 188
+ M +G++G ++G++ ++ + P + +L++ L G +
Sbjct: 137 EFGATIFKGMGDVAPAMGMIGTLIGLVAMLSNM----DDPKSIGPAMAVALLTTLYGAVL 192
Query: 189 S 189
+
Sbjct: 193 A 193
>gi|320529441|ref|ZP_08030529.1| flagellar motor protein MotA [Selenomonas artemidis F0399]
gi|320138407|gb|EFW30301.1| flagellar motor protein MotA [Selenomonas artemidis F0399]
Length = 287
Score = 37.1 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 18/99 (18%), Positives = 40/99 (40%), Gaps = 7/99 (7%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
D + ++D +A E E S + +G+LGAV+G++ ++ ++
Sbjct: 152 DFVGDVLDAELAIMQERHAEGRSMFTQAGTYAPTLGVLGAVVGLIAALGNL----NDIDK 207
Query: 171 SIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQ 209
I + ++ +LG+ + + F K + Q
Sbjct: 208 LGHSIAAAFVATILGIFTG---YVLWMPFANKLKIMSEQ 243
>gi|160880838|ref|YP_001559806.1| MotA/TolQ/ExbB proton channel [Clostridium phytofermentans ISDg]
gi|160429504|gb|ABX43067.1| MotA/TolQ/ExbB proton channel [Clostridium phytofermentans ISDg]
Length = 266
Score = 37.1 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 24/167 (14%), Positives = 60/167 (35%), Gaps = 21/167 (12%)
Query: 40 SVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIF----------M 89
SV+I F T+ F + F +S + K L ++ + +I +
Sbjct: 37 SVLITFGGAFFTVLAMSPSFAEFFNGLKSFALILKPLPSNEKETIESIITLSNVARKEGL 96
Query: 90 SAMSEWKKSCDKGARSPIGIQ-------DRIDRMMDVAIARELEEITEKLSFLGSMSSAG 142
A+ E S + + + + +++ + E + F ++ + G
Sbjct: 97 LALEEAANSIEDEFMKKGVLLIVDGTDPELVRSILETELGCIEERHKSVIGFWDNLGAMG 156
Query: 143 LLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVS 189
G++G ++G++ + S P + +L++ G ++
Sbjct: 157 PAWGMIGTLIGLINMLGKMEDVAS----VGPNMAVALVTTFYGSMLA 199
>gi|92113629|ref|YP_573557.1| MotA/TolQ/ExbB proton channel [Chromohalobacter salexigens DSM
3043]
gi|91796719|gb|ABE58858.1| MotA/TolQ/ExbB proton channel [Chromohalobacter salexigens DSM
3043]
Length = 299
Score = 37.1 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 16/79 (20%), Positives = 35/79 (44%), Gaps = 2/79 (2%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
D I ++ IAR + +M++ G+LG ++G++ + I + V
Sbjct: 145 DEIHDVLRWRIARMRAREYAESQIFRTMATYAPAFGMLGTLIGLINMLEVI--NGGDLTV 202
Query: 171 SIPGIIESLISILLGLCVS 189
P + +L+S G+ ++
Sbjct: 203 IGPRLAVALMSTFYGILLA 221
>gi|146296537|ref|YP_001180308.1| MotA/TolQ/ExbB proton channel [Caldicellulosiruptor saccharolyticus
DSM 8903]
gi|145410113|gb|ABP67117.1| MotA/TolQ/ExbB proton channel [Caldicellulosiruptor saccharolyticus
DSM 8903]
Length = 265
Score = 37.1 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 21/122 (17%), Positives = 43/122 (35%), Gaps = 6/122 (4%)
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDR--IDRMMDVAIARELEE 127
E + + GL A+ + KG + + I ++D + E
Sbjct: 79 EQLVQLSDRARKEGLLALEQEIPNIQNPLLKKGLGLVVDGIEGEVIRDILDREVYLAENE 138
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLC 187
+ + +GI+G V+G++ +I SN P I + ++ L G+
Sbjct: 139 LRAAAEVFEAAGGYSPTMGIIGTVMGLISVLSNI----SNPDEVAPAIAVAFVATLYGVS 194
Query: 188 VS 189
+
Sbjct: 195 FA 196
>gi|114762173|ref|ZP_01441641.1| flagellar motor protein [Pelagibaca bermudensis HTCC2601]
gi|114545197|gb|EAU48200.1| flagellar motor protein [Roseovarius sp. HTCC2601]
Length = 289
Score = 37.1 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 24/144 (16%), Positives = 49/144 (34%), Gaps = 10/144 (6%)
Query: 46 SVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARS 105
I L RQ + T+ I + + + +S
Sbjct: 84 LFELIRLARQSPVAIEEHVESPDESTIFSKYPKIQGD---KIAIELICDTMRSMSMNYDD 140
Query: 106 PIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYY 165
P +++ +D+ ++ + L +M+ +GI+ AVLG++ SI
Sbjct: 141 PHQVEEVLDKRIEALEHHRMHSSHA----LQAMADGLPALGIVAAVLGVIKTMGSI---D 193
Query: 166 SNNVVSIPGIIESLISILLGLCVS 189
V I +L+ LG+ ++
Sbjct: 194 QPPEVLGKLIGGALVGTFLGVFLA 217
>gi|256829035|ref|YP_003157763.1| MotA/TolQ/ExbB proton channel [Desulfomicrobium baculatum DSM 4028]
gi|256578211|gb|ACU89347.1| MotA/TolQ/ExbB proton channel [Desulfomicrobium baculatum DSM 4028]
Length = 249
Score = 37.1 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 14/72 (19%), Positives = 29/72 (40%), Gaps = 4/72 (5%)
Query: 135 LGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGI----IESLISILLGLCVSI 190
L + VG+LG V+G+M F + + V+I I + + + G+ + +
Sbjct: 173 LSLIQDVSPSVGLLGTVIGLMMGFAGMNLAETELEVAIQNITRTMAMACSTTVYGIILGL 232
Query: 191 PSSIAYNKFIED 202
+ +A
Sbjct: 233 GAMLAIAVLTRR 244
>gi|319764524|ref|YP_004128461.1| mota/tolq/exbb proton channel [Alicycliphilus denitrificans BC]
gi|330826740|ref|YP_004390043.1| flagellar motor stator protein MotA [Alicycliphilus denitrificans
K601]
gi|317119085|gb|ADV01574.1| MotA/TolQ/ExbB proton channel [Alicycliphilus denitrificans BC]
gi|329312112|gb|AEB86527.1| flagellar motor stator protein MotA [Alicycliphilus denitrificans
K601]
Length = 286
Score = 37.1 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 24/108 (22%), Positives = 42/108 (38%), Gaps = 9/108 (8%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI 172
I+ +MD I +E ++ L ++ A GI+ AVLG++ + V
Sbjct: 145 IEALMDSEIDTHHQEAHAPVAALTRLAGALPAFGIVAAVLGVVNT---MGSVGQPPAVLG 201
Query: 173 PGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAI 220
I +L+ LG+ +AY + + E EF+ I
Sbjct: 202 GMIASALVGTFLGI------LLAYGLVEPLAGLLEQKAEDAGKEFACI 243
>gi|197106584|ref|YP_002131961.1| chemotaxis MotA protein [Phenylobacterium zucineum HLK1]
gi|196480004|gb|ACG79532.1| chemotaxis MotA protein [Phenylobacterium zucineum HLK1]
Length = 289
Score = 37.1 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 21/120 (17%), Positives = 46/120 (38%), Gaps = 6/120 (5%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+++ M+ + + E + L +++ A +GI+ AVLG++ SI V
Sbjct: 143 HQVEDAMEKQLEKHHHEAQQPSHALQTLADALPALGIVAAVLGVIKTMGSIT---EPPEV 199
Query: 171 SIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNIS 230
I +L+ LG+ ++ ++ + F ++L GN +
Sbjct: 200 LGGMIGSALVGTFLGVFLAYGLV---GPMATRMREVIDEEGSFYRIIQSVLVAHLHGNAA 256
>gi|92114148|ref|YP_574076.1| chemotaxis MotA protein [Chromohalobacter salexigens DSM 3043]
gi|91797238|gb|ABE59377.1| chemotaxis MotA protein [Chromohalobacter salexigens DSM 3043]
Length = 293
Score = 37.1 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 22/144 (15%), Positives = 50/144 (34%), Gaps = 7/144 (4%)
Query: 46 SVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARS 105
++ + L + R+ ++ I + M+ ++++ + G
Sbjct: 80 ALQYRLLTKARRDGMLAIERDIDAPEDSAIFSDYPKIANDPLIMAFITDYLRLMVSGNMD 139
Query: 106 PIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYY 165
P ID +M+ I E L S+ GI+ AV+G++ +
Sbjct: 140 PFE----IDTLMEHEIDTFQHEAEIPAHALHSVGDGLPAFGIVAAVMGVVHA---LGAAD 192
Query: 166 SNNVVSIPGIIESLISILLGLCVS 189
I ++L+ LG+ ++
Sbjct: 193 QGAAAMGQMIAQALVGTFLGILLA 216
>gi|34496476|ref|NP_900691.1| flagellar motor protein [Chromobacterium violaceum ATCC 12472]
gi|34102330|gb|AAQ58696.1| chemotaxis motA protein [Chromobacterium violaceum ATCC 12472]
Length = 249
Score = 37.1 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 17/79 (21%), Positives = 35/79 (44%), Gaps = 4/79 (5%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
D + +M+V I+ + S +GILGAVLG++ +++ S+
Sbjct: 122 DTLRAVMEVEISMFEHARRQAARIWESAGGYAPTMGILGAVLGLIHVMENL----SDPSK 177
Query: 171 SIPGIIESLISILLGLCVS 189
GI + ++ + G+ +
Sbjct: 178 LGGGIAVAFVATVYGVGSA 196
>gi|313896031|ref|ZP_07829585.1| chemotaxis protein MotA [Selenomonas sp. oral taxon 137 str. F0430]
gi|312975456|gb|EFR40917.1| chemotaxis protein MotA [Selenomonas sp. oral taxon 137 str. F0430]
Length = 285
Score = 37.1 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 18/99 (18%), Positives = 40/99 (40%), Gaps = 7/99 (7%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
D + ++D +A E E S + +G+LGAV+G++ ++ ++
Sbjct: 150 DFVGDVLDAELAIMQERHAEGRSMFTQAGTYAPTLGVLGAVVGLIAALGNL----NDIDK 205
Query: 171 SIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQ 209
I + ++ +LG+ + + F K + Q
Sbjct: 206 LGHSIAAAFVATILGIFTG---YVLWMPFANKLKIMSEQ 241
>gi|57505392|ref|ZP_00371320.1| probable flagellar motor proton channel Cj0337c [Campylobacter
upsaliensis RM3195]
gi|57016217|gb|EAL53003.1| probable flagellar motor proton channel Cj0337c [Campylobacter
upsaliensis RM3195]
Length = 258
Score = 36.7 bits (84), Expect = 2.2, Method: Composition-based stats.
Identities = 13/79 (16%), Positives = 30/79 (37%), Gaps = 4/79 (5%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ I M++ + E E + +G++GAV G++ + + N
Sbjct: 122 EEIHESMEIQTEQLEEHYKECAEYWIIFGETCPTMGLVGAVFGLILALKLL----DNPQA 177
Query: 171 SIPGIIESLISILLGLCVS 189
GI + + + G+ +
Sbjct: 178 MAAGISGAFTATVTGIFGA 196
>gi|168334554|ref|ZP_02692710.1| MotA/TolQ/ExbB proton channel [Epulopiscium sp. 'N.t. morphotype
B']
Length = 255
Score = 36.7 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 14/79 (17%), Positives = 36/79 (45%), Gaps = 4/79 (5%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ I +++ +A + +K F ++ G G++G ++G++ + S+
Sbjct: 120 ELIRDILETELAFMEDRHKDKQGFWEHIAELGPAWGMIGTLIGLVNMLAQL----SDPST 175
Query: 171 SIPGIIESLISILLGLCVS 189
P + +LI+ L G ++
Sbjct: 176 LGPSMAVALITTLYGSVIA 194
>gi|331006558|ref|ZP_08329850.1| Flagellar motor rotation protein MotA [gamma proteobacterium
IMCC1989]
gi|330419627|gb|EGG94001.1| Flagellar motor rotation protein MotA [gamma proteobacterium
IMCC1989]
Length = 251
Score = 36.7 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 16/124 (12%), Positives = 43/124 (34%), Gaps = 4/124 (3%)
Query: 66 GQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAREL 125
++ + GL A+ +S D + ++
Sbjct: 74 ADLIDEIVALADEARKGGLLALEGKEVSSDFLGKGIQLLVDGHEPDVVKGILSKEKTEAE 133
Query: 126 EEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLG 185
+ S +M+S +G++G ++G++ ++ S+ P + +L++ L G
Sbjct: 134 KRHAVGASIFTNMASMAPAMGMIGTLIGLVAMLANM----SDPKSIGPAMAVALLTTLYG 189
Query: 186 LCVS 189
++
Sbjct: 190 AVLA 193
>gi|312877227|ref|ZP_07737196.1| MotA/TolQ/ExbB proton channel [Caldicellulosiruptor lactoaceticus
6A]
gi|311796036|gb|EFR12396.1| MotA/TolQ/ExbB proton channel [Caldicellulosiruptor lactoaceticus
6A]
Length = 265
Score = 36.7 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 21/151 (13%), Positives = 56/151 (37%), Gaps = 11/151 (7%)
Query: 46 SVNFITLRRQFREFEQLFWSGQ-SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGAR 104
S ++ + F+ +F + +V + L + ++ E + +
Sbjct: 50 SFPMSQIKTAVKHFKMVFMDKKIDFASVVEQLVQLSDRARKEGLLALEQEIPNIQNPLMK 109
Query: 105 SPIGIQ------DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFF 158
+G+ + I ++D + +E+ E + +GI+G V+G++
Sbjct: 110 KGLGLVVDGIEGEVIRDILDREVYLAEDELKEAAEVFEAAGGYAPTMGIIGTVMGLISVL 169
Query: 159 QSIAGYYSNNVVSIPGIIESLISILLGLCVS 189
++ +N P I + ++ L G+ +
Sbjct: 170 SNL----TNPDELGPAIAVAFVATLYGVSSA 196
>gi|322435022|ref|YP_004217234.1| MotA/TolQ/ExbB proton channel [Acidobacterium sp. MP5ACTX9]
gi|321162749|gb|ADW68454.1| MotA/TolQ/ExbB proton channel [Acidobacterium sp. MP5ACTX9]
Length = 261
Score = 36.7 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 20/146 (13%), Positives = 55/146 (37%), Gaps = 7/146 (4%)
Query: 47 VNFITLRRQFREFEQLFWSGQS-LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARS 105
+ +++ + F G++ L + G+ ++ + +
Sbjct: 55 IFLAAMKQIVKVFLHKGHDGEAVLAQIVDFANKARKSGIVSLDAELAAVHDPFLKQALML 114
Query: 106 PIGIQD--RIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAG 163
+ + + ++M + + + + + +M VGI+GAVLG++ +S+
Sbjct: 115 AVDGTEPSELRKIMQLELDNKSTIEEKIPAVFEAMGGYSPTVGIIGAVLGLIQVMKSL-- 172
Query: 164 YYSNNVVSIPGIIESLISILLGLCVS 189
N GI + ++ + G+ V+
Sbjct: 173 --DNIDEVGRGIATAFVATIYGVAVA 196
>gi|298345605|ref|YP_003718292.1| hypothetical protein HMPREF0573_10479 [Mobiluncus curtisii ATCC
43063]
gi|298235666|gb|ADI66798.1| hypothetical protein HMPREF0573_10479 [Mobiluncus curtisii ATCC
43063]
Length = 340
Score = 36.7 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 23/120 (19%), Positives = 44/120 (36%), Gaps = 15/120 (12%)
Query: 5 GLAIMDISIFALFMQMGLAVKCIIT--LLFIFSILSWSVIIQKSVNFITLRRQFREFEQL 62
G ++ + I F G ++ ++ I + +SW VI K R Q R+F+Q
Sbjct: 83 GAMVLALVIVGAFAATGFLAWWVMVAPVMGIGATISWGVIAAK-----RGREQDRQFQQS 137
Query: 63 FWSGQSLETVCKSLKNHH--NIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVA 120
W+ + K L L ++ M +W K + + + + +A
Sbjct: 138 IWA------LEKRLAQSPAGRAALQSVGMRGAKQWAKVAATSLAGGKQMPGTLAQAVRIA 191
>gi|295111384|emb|CBL28134.1| Flagellar motor component [Synergistetes bacterium SGP1]
Length = 239
Score = 36.7 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 12/79 (15%), Positives = 35/79 (44%), Gaps = 4/79 (5%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ + ++D I + + S +++ G++G ++G++ ++A S
Sbjct: 102 ELVRAILDTEIGVLEDRHSANKSVFDTLAEFAPSYGMIGTLVGLIAMLGNLADVSS---- 157
Query: 171 SIPGIIESLISILLGLCVS 189
P + +LI+ + G ++
Sbjct: 158 LGPNMAVALITTMYGSMMA 176
>gi|254473242|ref|ZP_05086640.1| MotA/TolQ/ExbB proton channel [Pseudovibrio sp. JE062]
gi|211957963|gb|EEA93165.1| MotA/TolQ/ExbB proton channel [Pseudovibrio sp. JE062]
Length = 256
Score = 36.7 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 14/123 (11%), Positives = 47/123 (38%), Gaps = 7/123 (5%)
Query: 67 QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
+++ + ++ + +GL + + E + + + I M+ L
Sbjct: 79 ENIAHLAETARKEGPLGLENV---EIEEPTLAKGMQYVADGYDYNLIRDSMEKERDLYLT 135
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGL 186
+ E ++ + G++G ++G++ ++ + P + +L++ L G
Sbjct: 136 RLNEGARVYRALGDSAPAFGMIGTLVGLVQMLATM----DDPSTIGPSMAIALLTTLYGS 191
Query: 187 CVS 189
++
Sbjct: 192 LIA 194
>gi|163781626|ref|ZP_02176626.1| flagellar motor protein MotA [Hydrogenivirga sp. 128-5-R1-1]
gi|159882846|gb|EDP76350.1| flagellar motor protein MotA [Hydrogenivirga sp. 128-5-R1-1]
Length = 240
Score = 36.7 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 13/79 (16%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ I + AIA+ +++ ++ ++ G++G ++G++ +++ ++
Sbjct: 109 EEIKISAEGAIAQVDDKLGTNVAVWEKLADLFPAFGMIGTLVGLIQMLKNL----NDPSA 164
Query: 171 SIPGIIESLISILLGLCVS 189
PG+ +LI+ L G ++
Sbjct: 165 LGPGMAVALITTLYGAILA 183
>gi|157736661|ref|YP_001489344.1| flagellar motor protein MotA [Arcobacter butzleri RM4018]
gi|315635827|ref|ZP_07891089.1| flagellar motor protein MotA [Arcobacter butzleri JV22]
gi|157698515|gb|ABV66675.1| flagellar motor component MotA [Arcobacter butzleri RM4018]
gi|315479806|gb|EFU70477.1| flagellar motor protein MotA [Arcobacter butzleri JV22]
Length = 252
Score = 36.7 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 13/78 (16%), Positives = 30/78 (38%), Gaps = 4/78 (5%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
+++I+ ++ I + +G++GAVLG++ Q + N
Sbjct: 121 EEQIEESLEPVIEETEHYYHSASHYWLLAGETCPTMGLVGAVLGLILALQKL----DNPA 176
Query: 170 VSIPGIIESLISILLGLC 187
GI + + + G+
Sbjct: 177 EMAAGIAGAFTATVTGIA 194
>gi|160890477|ref|ZP_02071480.1| hypothetical protein BACUNI_02919 [Bacteroides uniformis ATCC 8492]
gi|156860209|gb|EDO53640.1| hypothetical protein BACUNI_02919 [Bacteroides uniformis ATCC 8492]
Length = 201
Score = 36.7 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 22/190 (11%), Positives = 64/190 (33%), Gaps = 26/190 (13%)
Query: 40 SVIIQKSV--NFITLRRQFREFEQLFWS--GQSLETVCKSLKNHHNIGLAAIFMSAMSEW 95
++I+ F + ++F + + ++++ + + L + N L
Sbjct: 30 AIILAGGFFGEFYQRMKLQKQFTETLENITPENIDGLLQQLPSAGNSPL----------L 79
Query: 96 KKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMM 155
+ A + ++ +E+ +F+ G ++G++G ++ M
Sbjct: 80 RNLSKLSAHRDDAA--YCEHLLANYEMEAEKELGRSRTFIK----LGPMLGLMGTLIPMG 133
Query: 156 GFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFAN 215
+A + + + + ++GL ++ I + +E
Sbjct: 134 PALVGLA--QGDISSMAYNMQVAFATTVVGLVIAAVGVITLQVKQRWYAREMNDLEY--- 188
Query: 216 EFSAILSRQT 225
++SRQT
Sbjct: 189 -LYKVISRQT 197
>gi|172058883|ref|YP_001815343.1| MotA/TolQ/ExbB proton channel [Exiguobacterium sibiricum 255-15]
gi|171991404|gb|ACB62326.1| MotA/TolQ/ExbB proton channel [Exiguobacterium sibiricum 255-15]
Length = 261
Score = 36.7 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 13/80 (16%), Positives = 30/80 (37%), Gaps = 4/80 (5%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
+ ++ +M + E + + +G+LGAV+G++ + S+
Sbjct: 122 SEYVEDVMTRDLENMTERHHANANIFTQAGTYAPTLGVLGAVVGLVAALSDL----SDIE 177
Query: 170 VSIPGIIESLISILLGLCVS 189
I + I+ L G+
Sbjct: 178 KLGHAISGAFIATLFGIFTG 197
>gi|307293791|ref|ZP_07573635.1| MotA/TolQ/ExbB proton channel [Sphingobium chlorophenolicum L-1]
gi|306879942|gb|EFN11159.1| MotA/TolQ/ExbB proton channel [Sphingobium chlorophenolicum L-1]
Length = 222
Score = 36.7 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 18/115 (15%), Positives = 51/115 (44%), Gaps = 5/115 (4%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
D+ + ++A + + S++ A +G+ G ++G++G F + +
Sbjct: 99 DQFELWAARSLADRAQRHASARNVWLSIADAAPALGMAGTIVGLVGMFAGM----DDPAT 154
Query: 171 SIPGIIESLISILLGLCVS-IPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQ 224
P + +L++ G+ ++ I ++ + + S++ A++ +AI R+
Sbjct: 155 LGPSMALALLTTFYGVVIANILAAPVAARLADLSERELAWQREVADQMAAIARRE 209
>gi|296134256|ref|YP_003641503.1| MotA/TolQ/ExbB proton channel [Thermincola sp. JR]
gi|296032834|gb|ADG83602.1| MotA/TolQ/ExbB proton channel [Thermincola potens JR]
Length = 257
Score = 36.7 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 13/77 (16%), Positives = 30/77 (38%), Gaps = 4/77 (5%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI 172
+ +++ I + S +GI+G V+G++ ++ S+
Sbjct: 124 VRDILETQIEFMDQRHKIGADIFESAGGYAPTMGIIGTVMGLVHVLGNL----SDPESLG 179
Query: 173 PGIIESLISILLGLCVS 189
P I + I+ L G+ +
Sbjct: 180 PAIASAFIATLYGVSSA 196
>gi|323490129|ref|ZP_08095349.1| flagellar motor protein MotA [Planococcus donghaensis MPA1U2]
gi|323396177|gb|EGA89003.1| flagellar motor protein MotA [Planococcus donghaensis MPA1U2]
Length = 256
Score = 36.7 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 18/96 (18%), Positives = 37/96 (38%), Gaps = 7/96 (7%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
Q+ I +M+ IA E + +G+LGAV+G++ + +
Sbjct: 112 QEHIRDLMEEEIAAMEERHELGAKIFAQAGTYAPTLGVLGAVIGLVAALGHL----DDVA 167
Query: 170 VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKK 205
+ I + I+ L G+ + ++ F K+
Sbjct: 168 LLGKSISAAFIATLFGIFSG---YVLWHPFANKLKR 200
>gi|213515066|ref|NP_001133913.1| regulator of G-protein signalling 14 [Salmo salar]
gi|209155798|gb|ACI34131.1| Regulator of G-protein signaling 14 [Salmo salar]
Length = 514
Score = 36.7 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 16/96 (16%), Positives = 39/96 (40%), Gaps = 3/96 (3%)
Query: 35 SILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLE--TVCKSLKNHHNIGLAAIFMSAM 92
S++SW+V +K + R F+ F + S +++ C+ + + + A
Sbjct: 51 SVVSWAVCFEKLLEDPMGVRYFKAFLRSEVSAENILFYQACEKFREIPPSRMKELSEEAH 110
Query: 93 SEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ ++ A + I D R+ + + + E+
Sbjct: 111 AIFQTYLSDHAPYAVNIDD-TARVEEKDLLKPTPEM 145
>gi|126732299|ref|ZP_01748099.1| Mg2+ and Co2+ transporters [Sagittula stellata E-37]
gi|126707168|gb|EBA06234.1| Mg2+ and Co2+ transporters [Sagittula stellata E-37]
Length = 330
Score = 36.7 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 18/116 (15%), Positives = 40/116 (34%), Gaps = 21/116 (18%)
Query: 40 SVIIQKSVN-FITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKS 98
++I+++ + R + + G L + + L L + A
Sbjct: 197 AIILRRYLQPQRDAMRTLQMVHPDWVEGDDLRQLAEELD-----ALERVVEDA------- 244
Query: 99 CDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGM 154
++DR+ + D + E + L L +S+ L +G L + G+
Sbjct: 245 --------DALRDRMALVRDEVQSARDERLNRNLYLLSILSAVFLPLGFLTGLFGI 292
>gi|315638942|ref|ZP_07894113.1| flagellar motor protein A [Campylobacter upsaliensis JV21]
gi|315480971|gb|EFU71604.1| flagellar motor protein A [Campylobacter upsaliensis JV21]
Length = 258
Score = 36.7 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 13/79 (16%), Positives = 30/79 (37%), Gaps = 4/79 (5%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ I M++ + E E + +G++GAV G++ + + N
Sbjct: 122 EEIHESMEIQTEQLEEHYKECAEYWIVFGETCPTMGLVGAVFGLILALKLL----DNPQA 177
Query: 171 SIPGIIESLISILLGLCVS 189
GI + + + G+ +
Sbjct: 178 MAAGISGAFTATVTGIFGA 196
>gi|251794147|ref|YP_003008878.1| MotA/TolQ/ExbB proton channel [Paenibacillus sp. JDR-2]
gi|247541773|gb|ACS98791.1| MotA/TolQ/ExbB proton channel [Paenibacillus sp. JDR-2]
Length = 265
Score = 36.7 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 17/98 (17%), Positives = 38/98 (38%), Gaps = 7/98 (7%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
QD + ++ I+ + + +G+LGAV+G++G G+ +
Sbjct: 122 QDFVRDVLLEDISATEDRHKAGALIFTQAGTYAPTLGVLGAVVGLIGAL----GHMDDME 177
Query: 170 VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFA 207
I + I+ LLG+ + ++ K+ +
Sbjct: 178 TLAHSIAGAFIATLLGIFTG---YVLWHPLANKLKRLS 212
>gi|126649534|ref|ZP_01721775.1| flagellar motor protein MotA [Bacillus sp. B14905]
gi|126593859|gb|EAZ87782.1| flagellar motor protein MotA [Bacillus sp. B14905]
Length = 267
Score = 36.7 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 15/98 (15%), Positives = 37/98 (37%), Gaps = 7/98 (7%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
D I ++ + E + + +G+LGAV+G++ + ++
Sbjct: 123 DYIRDVLTEEVEAMEERHASGSAIFTQAGTYAPTLGVLGAVVGLIAALADM----NDIEK 178
Query: 171 SIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAM 208
I + ++ LLG+ + ++ F K+ +
Sbjct: 179 LGHAISAAFMATLLGIFTG---YVLWHPFANKLKRKSA 213
>gi|54307285|ref|YP_128305.1| flagellar motor protein MotA [Photobacterium profundum SS9]
gi|46911705|emb|CAG18503.1| Hypothetical MotA flagellar motor transmembrane protein
[Photobacterium profundum SS9]
Length = 282
Score = 36.7 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 26/124 (20%), Positives = 52/124 (41%), Gaps = 12/124 (9%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
++ ++++ + +++ LG + A GI+ AVLG++ QSI G +
Sbjct: 139 HHDLEAVLELELHALEDDLMRPSKALGKVGEAMPGFGIVAAVLGIVVTMQSIGGDLALIG 198
Query: 170 VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEG---FANEFSAILSRQTE 226
V + +L+ G+ + Y F + A Q++ + SAIL Q +
Sbjct: 199 VKV---AAALVGTFFGI------LMCYAVFEPIAASIANQVKKEMMAMHMVSAILVSQAQ 249
Query: 227 GNIS 230
G +
Sbjct: 250 GKPT 253
>gi|296274016|ref|YP_003656647.1| MotA/TolQ/ExbB proton channel [Arcobacter nitrofigilis DSM 7299]
gi|296098190|gb|ADG94140.1| MotA/TolQ/ExbB proton channel [Arcobacter nitrofigilis DSM 7299]
Length = 251
Score = 36.7 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 19/114 (16%), Positives = 49/114 (42%), Gaps = 5/114 (4%)
Query: 117 MDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII 176
+++ + + T + ++ +G++G ++G++ ++ S+ P +
Sbjct: 129 LELKLEHMDKRHTSLIGVFSNIGGTAGSMGMIGTLVGLVAMLANL----SDPAAVGPAMA 184
Query: 177 ESLISILLG-LCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNI 229
+LI+ L G L ++ + + +K + K E S I + ++ GNI
Sbjct: 185 VALITTLYGALIGTLIAGLIESKLDQKHKTEVTACEVIITGTSMIAAEESIGNI 238
>gi|229591827|ref|YP_002873946.1| flagellar motor protein [Pseudomonas fluorescens SBW25]
gi|229363693|emb|CAY51067.1| putative chemotaxis protein [Pseudomonas fluorescens SBW25]
Length = 246
Score = 36.7 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 16/115 (13%), Positives = 42/115 (36%), Gaps = 5/115 (4%)
Query: 75 SLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSF 134
+ + +GL + + + + + I +++V +
Sbjct: 87 TARKEGLLGLEGVADAEPDSYAR-KGLQLLVDGAEPEAIRSILEVDFYTQESRDINAAKV 145
Query: 135 LGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVS 189
SM +GI+GAV+G++ ++A + GI + ++ + G+ +
Sbjct: 146 FESMGGYAPTIGIIGAVMGLIHVMGNLA----DPSQLGSGIAVAFVATIYGVASA 196
>gi|224024442|ref|ZP_03642808.1| hypothetical protein BACCOPRO_01167 [Bacteroides coprophilus DSM
18228]
gi|224017664|gb|EEF75676.1| hypothetical protein BACCOPRO_01167 [Bacteroides coprophilus DSM
18228]
Length = 200
Score = 36.7 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 27/176 (15%), Positives = 69/176 (39%), Gaps = 23/176 (13%)
Query: 17 FMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQS--LETVCK 74
++ GL V +I LL I I S +I ++++R+ + ++ + K
Sbjct: 10 WISTGLLVP-VIVLLIILFIRSLLLIGSFFGQYLSIRKTDALLRKALDELTPDCIQHLEK 68
Query: 75 SLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSF 134
L N + +M M E + S + +A + + L+
Sbjct: 69 QLPEQSNAPIIR-YMRQMLETRNSPAH---------------VQRLLADYEIKADKDLAL 112
Query: 135 LGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLGLCVS 189
+++ G ++G++G ++ M ++ + ++ S+ + + + ++GL +
Sbjct: 113 SKTLTKMGPMLGLMGTLIPMGPALVGLS---TGDISSMAYNMQVAFATTVVGLFAA 165
>gi|254463720|ref|ZP_05077131.1| chemotaxis protein MotA [Rhodobacterales bacterium Y4I]
gi|206684628|gb|EDZ45110.1| chemotaxis protein MotA [Rhodobacterales bacterium Y4I]
Length = 289
Score = 36.7 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 20/93 (21%), Positives = 39/93 (41%), Gaps = 7/93 (7%)
Query: 97 KSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMG 156
+S P +++ +++ M+ + L L +M+ +GI+ AVLG++
Sbjct: 132 RSASMNYDDPHQVEEVLEKRMEANLHHALHSSHA----LQTMADGLPALGIVAAVLGVIK 187
Query: 157 FFQSIAGYYSNNVVSIPGIIESLISILLGLCVS 189
SI V I +L+ LG+ +S
Sbjct: 188 TMGSI---DQPPEVLGKLIGGALVGTFLGVFLS 217
>gi|146306331|ref|YP_001186796.1| MotA/TolQ/ExbB proton channel [Pseudomonas mendocina ymp]
gi|145574532|gb|ABP84064.1| MotA/TolQ/ExbB proton channel [Pseudomonas mendocina ymp]
Length = 255
Score = 36.7 bits (84), Expect = 2.7, Method: Composition-based stats.
Identities = 28/163 (17%), Positives = 58/163 (35%), Gaps = 8/163 (4%)
Query: 31 LFIFSILSWSVIIQKSVN---FITLRRQFREFEQLFWSGQS-LETVCKSLKNHHNIGLAA 86
L I + S V++ K + R F S +S + + + + G+ A
Sbjct: 35 LLIVVVGSLFVVLVKFSFGQFLGAFKVVARAFRFRLPSVESCIGEMVEIAQVARKEGVLA 94
Query: 87 IFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVG 146
+ S S QD I ++ LE E +M G +G
Sbjct: 95 LEGRDFSSPFLSAGVQLMIDGQGQDTIRAFLEKERVLTLERNREGAKVFSAMGDVGPAMG 154
Query: 147 ILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVS 189
++G ++G++ ++ + P + +L++ L G ++
Sbjct: 155 MIGTLVGLVQMLSNM----EDPKSIGPAMAVALLTTLYGAMMA 193
>gi|332533103|ref|ZP_08408972.1| flagellar motor rotation protein MotA [Pseudoalteromonas
haloplanktis ANT/505]
gi|332037385|gb|EGI73839.1| flagellar motor rotation protein MotA [Pseudoalteromonas
haloplanktis ANT/505]
Length = 254
Score = 36.7 bits (84), Expect = 2.7, Method: Composition-based stats.
Identities = 26/160 (16%), Positives = 64/160 (40%), Gaps = 11/160 (6%)
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGI------QDRIDRMMDVAI 121
+E + +K + +++ +E D A + + + ++ +++ +
Sbjct: 73 DIEDAIEQVKRWSHKARQEGYLALENEALAHPDAYAAKGLSLLVDGCSEQKLRDTLEIDL 132
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLIS 181
E + + E +M +GILGAVLG++ I ++ + G+ + I+
Sbjct: 133 LLERDRLLEAARVYEAMGGYSPTIGILGAVLGLIQAMSFI----TDPQMLGAGVATAFIA 188
Query: 182 ILLGLCVSIPSSI-AYNKFIEDSKKFAMQMEGFANEFSAI 220
+ G+ ++ + NK + ++ + E A AI
Sbjct: 189 TIYGVGLANLLFLPMANKLKQRVEQKMLYHEMLAEGVIAI 228
>gi|298207565|ref|YP_003715744.1| putative biopolymer transport protein [Croceibacter atlanticus
HTCC2559]
gi|83850201|gb|EAP88069.1| putative biopolymer transport protein [Croceibacter atlanticus
HTCC2559]
Length = 114
Score = 36.7 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 17/66 (25%), Positives = 33/66 (50%), Gaps = 4/66 (6%)
Query: 134 FLGSMSSAGLLV---GILGAVLGMMGFFQSIAGYYSNN-VVSIPGIIESLISILLGLCVS 189
+ +S+ L + GILG+V+G++ F +I G S + V G+ + ++ + GL
Sbjct: 41 TITLLSNISLFILAWGILGSVIGLIQAFDAIEGAGSVSQGVMAGGLKIAFLTTVFGLFTF 100
Query: 190 IPSSIA 195
I +
Sbjct: 101 IFGRLF 106
>gi|57168475|ref|ZP_00367609.1| probable flagellar motor proton channel Cj0337c [Campylobacter coli
RM2228]
gi|305432894|ref|ZP_07402052.1| flagellar motor protein A [Campylobacter coli JV20]
gi|57020283|gb|EAL56957.1| probable flagellar motor proton channel Cj0337c [Campylobacter coli
RM2228]
gi|304444048|gb|EFM36703.1| flagellar motor protein A [Campylobacter coli JV20]
Length = 258
Score = 36.7 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 13/79 (16%), Positives = 30/79 (37%), Gaps = 4/79 (5%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ I M++ + E E + +G++GAV G++ + + N
Sbjct: 122 EEIHESMEIQTEQLEEHYKECAEYWIIFGETCPTMGLVGAVFGLILALKLL----DNPQA 177
Query: 171 SIPGIIESLISILLGLCVS 189
GI + + + G+ +
Sbjct: 178 MAAGISGAFTATVTGIFGA 196
>gi|323139661|ref|ZP_08074703.1| MotA/TolQ/ExbB proton channel [Methylocystis sp. ATCC 49242]
gi|322395093|gb|EFX97652.1| MotA/TolQ/ExbB proton channel [Methylocystis sp. ATCC 49242]
Length = 291
Score = 36.7 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 19/95 (20%), Positives = 42/95 (44%), Gaps = 5/95 (5%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI 172
I+ +MD +A + + L ++ +GI+ AVLG++ ++ + +
Sbjct: 143 IESLMDEEMAEIKHDKLKPYHALTAIGDGLPALGIVAAVLGVIKAMGAL---DQSPELLG 199
Query: 173 PGIIESLISILLGLCV--SIPSSIAYNKFIEDSKK 205
I +++ G+ V I + +AY + SK+
Sbjct: 200 GLIGAAMVGTFAGIFVSYGIMTPLAYKVKVARSKE 234
>gi|121612656|ref|YP_001000047.1| flagellar motor protein MotA [Campylobacter jejuni subsp. jejuni
81-176]
gi|148926432|ref|ZP_01810115.1| putative flagellar motor proton channel [Campylobacter jejuni
subsp. jejuni CG8486]
gi|167005003|ref|ZP_02270761.1| flagellar motor protein MotA [Campylobacter jejuni subsp. jejuni
81-176]
gi|87250461|gb|EAQ73419.1| chemotaxis protein MotA, putative [Campylobacter jejuni subsp.
jejuni 81-176]
gi|145844595|gb|EDK21701.1| putative flagellar motor proton channel [Campylobacter jejuni
subsp. jejuni CG8486]
Length = 258
Score = 36.7 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 13/79 (16%), Positives = 30/79 (37%), Gaps = 4/79 (5%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ I M++ + E E + +G++GAV G++ + + N
Sbjct: 122 EEIHESMEIQTEQLEEHYKECAEYWIVFGETCPTMGLVGAVFGLILALKLL----DNPQA 177
Query: 171 SIPGIIESLISILLGLCVS 189
GI + + + G+ +
Sbjct: 178 MAAGISGAFTATVTGIFGA 196
>gi|86151159|ref|ZP_01069374.1| chemotaxis protein MotA, putative [Campylobacter jejuni subsp.
jejuni 260.94]
gi|86153687|ref|ZP_01071890.1| chemotaxis protein motA [Campylobacter jejuni subsp. jejuni
HB93-13]
gi|157414634|ref|YP_001481890.1| flagellar motor protein MotA [Campylobacter jejuni subsp. jejuni
81116]
gi|283955762|ref|ZP_06373253.1| putative flagellar motor proton channel [Campylobacter jejuni
subsp. jejuni 1336]
gi|315123902|ref|YP_004065906.1| chemotaxis protein MotA, putative [Campylobacter jejuni subsp.
jejuni ICDCCJ07001]
gi|85841506|gb|EAQ58753.1| chemotaxis protein MotA, putative [Campylobacter jejuni subsp.
jejuni 260.94]
gi|85842648|gb|EAQ59860.1| chemotaxis protein motA [Campylobacter jejuni subsp. jejuni
HB93-13]
gi|157385598|gb|ABV51913.1| putative flagellar motor proton channel [Campylobacter jejuni
subsp. jejuni 81116]
gi|283792717|gb|EFC31495.1| putative flagellar motor proton channel [Campylobacter jejuni
subsp. jejuni 1336]
gi|307747274|gb|ADN90544.1| Chemotaxis protein motA [Campylobacter jejuni subsp. jejuni M1]
gi|315017624|gb|ADT65717.1| chemotaxis protein MotA, putative [Campylobacter jejuni subsp.
jejuni ICDCCJ07001]
gi|315931585|gb|EFV10551.1| motA/TolQ/ExbB proton channel family protein [Campylobacter jejuni
subsp. jejuni 327]
Length = 258
Score = 36.7 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 13/79 (16%), Positives = 30/79 (37%), Gaps = 4/79 (5%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ I M++ + E E + +G++GAV G++ + + N
Sbjct: 122 EEIHESMEIQTEQLEEHYKECAEYWIVFGETCPTMGLVGAVFGLILALKLL----DNPQA 177
Query: 171 SIPGIIESLISILLGLCVS 189
GI + + + G+ +
Sbjct: 178 MAAGISGAFTATVTGIFGA 196
>gi|283955186|ref|ZP_06372688.1| chemotaxis protein MotA, putative [Campylobacter jejuni subsp.
jejuni 414]
gi|283793399|gb|EFC32166.1| chemotaxis protein MotA, putative [Campylobacter jejuni subsp.
jejuni 414]
Length = 258
Score = 36.7 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 18/121 (14%), Positives = 41/121 (33%), Gaps = 5/121 (4%)
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
L + + L + +E+ KS ++ I M++ + E
Sbjct: 81 LIEFAIIARRDGLLALESKTGEIENEFLKSAMMMLVDGKSFEE-IHESMEIQTEQLEEHY 139
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCV 188
E + +G++GAV G++ + + N GI + + + G+
Sbjct: 140 KECAEYWIVFGETCPTMGLVGAVFGLILALKLL----DNPQAMAAGISGAFTATVTGIFG 195
Query: 189 S 189
+
Sbjct: 196 A 196
>gi|90408166|ref|ZP_01216334.1| flagellar motor protein [Psychromonas sp. CNPT3]
gi|90310696|gb|EAS38813.1| flagellar motor protein [Psychromonas sp. CNPT3]
Length = 257
Score = 36.7 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 13/121 (10%), Positives = 36/121 (29%), Gaps = 4/121 (3%)
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
+ + G A+ + +S D + + I +
Sbjct: 77 IAKAVEMADAARKGGFLALEEAEISNAFMQKGVDMLVDGHDADVVRATLANDIRLTADRH 136
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCV 188
+G++G ++G++ ++ + P + +L++ L G V
Sbjct: 137 EVGADIFKQFGDVAPAMGMIGTLIGLVAMLSNM----DDPKSIGPAMAVALLTTLYGAMV 192
Query: 189 S 189
+
Sbjct: 193 A 193
>gi|323698016|ref|ZP_08109928.1| MotA/TolQ/ExbB proton channel [Desulfovibrio sp. ND132]
gi|323457948|gb|EGB13813.1| MotA/TolQ/ExbB proton channel [Desulfovibrio desulfuricans ND132]
Length = 297
Score = 36.7 bits (84), Expect = 2.9, Method: Composition-based stats.
Identities = 24/122 (19%), Positives = 47/122 (38%), Gaps = 5/122 (4%)
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEE 127
+L + K + L A S + KS ++ I ++ +A
Sbjct: 79 TLLDLSVKSKVDGVLSLERSANKATSSFMKSG-LCLLVDNYKEEEIRECLNAEMAFFNLR 137
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLC 187
+ F +++ G+ G+V+G++G I ++ V + I + IS L GL
Sbjct: 138 RQQSERFFQTLARTAPAFGVAGSVIGLIGLLMGI----NDTAVILKNIPVAFISTLYGLI 193
Query: 188 VS 189
+S
Sbjct: 194 LS 195
>gi|228950460|ref|ZP_04112620.1| Phage tail tape measure protein, TP901 [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
gi|228809275|gb|EEM55736.1| Phage tail tape measure protein, TP901 [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
Length = 872
Score = 36.7 bits (84), Expect = 2.9, Method: Composition-based stats.
Identities = 24/145 (16%), Positives = 58/145 (40%), Gaps = 15/145 (10%)
Query: 66 GQSLETVCKSL-KNHHNIGLAAIFMS-AMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAR 123
+L K L ++ L +F S A+ +GA+ + D + ++ +A
Sbjct: 128 SGTLHESMKDLTDQQRSMALETLFGSDAVRGATILFKEGAKGVNEMWDSMSKVTAADVAA 187
Query: 124 -ELEEITEKLSFLGSMSSA---------GLLVGIL-GAVLGMMGFFQSIAGYYSNNVVSI 172
+++ + +L+ L S S +V + + ++ F ++ G +
Sbjct: 188 TKIDTLKGRLTLLDSAFSTMKKTIGDALAPVVSVFVAGLQKLVDGFNALPGPVQKAIAIT 247
Query: 173 PGIIESL--ISILLGLCVSIPSSIA 195
GI+ +L ++ +G+ ++ IA
Sbjct: 248 GGIVLALTAVATAIGVVLAAFGMIA 272
>gi|221210918|ref|ZP_03583898.1| MotA/TolQ/ExbB proton channel [Burkholderia multivorans CGD1]
gi|221169874|gb|EEE02341.1| MotA/TolQ/ExbB proton channel [Burkholderia multivorans CGD1]
Length = 254
Score = 36.7 bits (84), Expect = 2.9, Method: Composition-based stats.
Identities = 23/155 (14%), Positives = 49/155 (31%), Gaps = 13/155 (8%)
Query: 38 SWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKK 97
+W+ + + ++ L K + ++ ++ + + +
Sbjct: 52 TWARFVDAVKQLRLAFVRATAADRK--HLSDLLEWGDRAKLEGLLAFESMDVTGIHPFAR 109
Query: 98 S---CDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGM 154
S I+D + R +D L GILG+VLG+
Sbjct: 110 RGLELLANGMSTAVIEDALQRELDAYERSHLAAARVWQQ----AGGYAPTFGILGSVLGL 165
Query: 155 MGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVS 189
+ + G+ PGI + ++ L GL +
Sbjct: 166 VQ----VTGHILEPAQLGPGIAVAFVATLYGLAFA 196
>gi|327398735|ref|YP_004339604.1| chemotaxis MotA protein [Hippea maritima DSM 10411]
gi|327181364|gb|AEA33545.1| chemotaxis MotA protein [Hippea maritima DSM 10411]
Length = 281
Score = 36.7 bits (84), Expect = 2.9, Method: Composition-based stats.
Identities = 27/121 (22%), Positives = 52/121 (42%), Gaps = 4/121 (3%)
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQ-DRIDRMMDVAIARELE 126
SLE V ++ + AA F+ D GI+ ++++ M+D I +
Sbjct: 95 SLEAVVDDPESSPILQDAAFFLKNKEARSLLIDALRNIVTGIEVEKLEEMLDTNIESIEK 154
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGL 186
E +G+++ + +GI+ AV+G++ ++ G +V I +L LGL
Sbjct: 155 EAMAPAKMVGTLAESMPGMGIVAAVMGVILTMGALGGS---ILVIGEHIAAALTGTFLGL 211
Query: 187 C 187
Sbjct: 212 L 212
>gi|228915247|ref|ZP_04078842.1| Phage tail tape measure protein, TP901 [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
gi|228844478|gb|EEM89534.1| Phage tail tape measure protein, TP901 [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
Length = 872
Score = 36.7 bits (84), Expect = 2.9, Method: Composition-based stats.
Identities = 24/145 (16%), Positives = 58/145 (40%), Gaps = 15/145 (10%)
Query: 66 GQSLETVCKSL-KNHHNIGLAAIFMS-AMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAR 123
+L K L ++ L +F S A+ +GA+ + D + ++ +A
Sbjct: 128 SGTLHESMKDLTDQQRSMALETLFGSDAVRGATILFKEGAKGVNEMWDSMSKVTAADVAA 187
Query: 124 -ELEEITEKLSFLGSMSSA---------GLLVGIL-GAVLGMMGFFQSIAGYYSNNVVSI 172
+++ + +L+ L S S +V + + ++ F ++ G +
Sbjct: 188 TKIDTLKGRLTLLDSAFSTMKKTIGDALAPVVSVFVAGLQKLVDGFNALPGPVQKAIAIT 247
Query: 173 PGIIESL--ISILLGLCVSIPSSIA 195
GI+ +L ++ +G+ ++ IA
Sbjct: 248 GGIVLALTAVATAIGVVLAAFGMIA 272
>gi|124516289|gb|EAY57797.1| putative flagellar motor component (MotA) [Leptospirillum rubarum]
Length = 260
Score = 36.7 bits (84), Expect = 2.9, Method: Composition-based stats.
Identities = 13/83 (15%), Positives = 34/83 (40%), Gaps = 11/83 (13%)
Query: 134 FLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSS 193
+ +GILGAVLG++ ++ S+ GI + ++ + G+ + +
Sbjct: 148 VFEAAGGYAPTIGILGAVLGLIHVMSNL----SDPNKLAEGIATAFVATVYGVGSANLAY 203
Query: 194 I-------AYNKFIEDSKKFAMQ 209
+ N + +++ ++
Sbjct: 204 LPLSGKLKIKNHYEGRNREIIIE 226
>gi|153952523|ref|YP_001398612.1| flagellar motor protein MotA [Campylobacter jejuni subsp. doylei
269.97]
gi|152939969|gb|ABS44710.1| putative chemotaxis protein MotA [Campylobacter jejuni subsp.
doylei 269.97]
Length = 258
Score = 36.7 bits (84), Expect = 2.9, Method: Composition-based stats.
Identities = 13/79 (16%), Positives = 30/79 (37%), Gaps = 4/79 (5%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ I M++ + E E + +G++GAV G++ + + N
Sbjct: 122 EEIHESMEIQTEQLEEHYKECAEYWIVFGETCPTMGLVGAVFGLILALKLL----DNPQA 177
Query: 171 SIPGIIESLISILLGLCVS 189
GI + + + G+ +
Sbjct: 178 MAAGISGAFTATVTGIFGA 196
>gi|57237388|ref|YP_178401.1| flagellar motor protein MotA [Campylobacter jejuni RM1221]
gi|86149176|ref|ZP_01067408.1| chemotaxis protein MotA, putative [Campylobacter jejuni subsp.
jejuni CF93-6]
gi|88597298|ref|ZP_01100533.1| chemotaxis protein MotA, putative [Campylobacter jejuni subsp.
jejuni 84-25]
gi|205356013|ref|ZP_03222781.1| putative flagellar motor proton channel [Campylobacter jejuni
subsp. jejuni CG8421]
gi|218561996|ref|YP_002343775.1| flagellar motor protein MotA [Campylobacter jejuni subsp. jejuni
NCTC 11168]
gi|57166192|gb|AAW34971.1| chemotaxis protein MotA, putative [Campylobacter jejuni RM1221]
gi|85840534|gb|EAQ57791.1| chemotaxis protein MotA, putative [Campylobacter jejuni subsp.
jejuni CF93-6]
gi|88190359|gb|EAQ94333.1| chemotaxis protein MotA, putative [Campylobacter jejuni subsp.
jejuni 84-25]
gi|112359702|emb|CAL34488.1| putative flagellar motor proton channel [Campylobacter jejuni
subsp. jejuni NCTC 11168]
gi|205346137|gb|EDZ32772.1| putative flagellar motor proton channel [Campylobacter jejuni
subsp. jejuni CG8421]
gi|284925609|gb|ADC27961.1| flagellar motor protein MotA [Campylobacter jejuni subsp. jejuni
IA3902]
gi|315057757|gb|ADT72086.1| Flagellar motor rotation protein MotA [Campylobacter jejuni subsp.
jejuni S3]
gi|315927860|gb|EFV07185.1| motA/TolQ/ExbB proton channel family protein [Campylobacter jejuni
subsp. jejuni DFVF1099]
Length = 258
Score = 36.7 bits (84), Expect = 2.9, Method: Composition-based stats.
Identities = 13/79 (16%), Positives = 30/79 (37%), Gaps = 4/79 (5%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ I M++ + E E + +G++GAV G++ + + N
Sbjct: 122 EEIHESMEIQTEQLEEHYKECAEYWIVFGETCPTMGLVGAVFGLILALKLL----DNPQA 177
Query: 171 SIPGIIESLISILLGLCVS 189
GI + + + G+ +
Sbjct: 178 MAAGISGAFTATVTGIFGA 196
>gi|308066933|ref|YP_003868538.1| chemotaxis motA protein (Motility protein A) [Paenibacillus
polymyxa E681]
gi|305856212|gb|ADM68000.1| Chemotaxis motA protein (Motility protein A) [Paenibacillus
polymyxa E681]
Length = 264
Score = 36.3 bits (83), Expect = 2.9, Method: Composition-based stats.
Identities = 15/98 (15%), Positives = 35/98 (35%), Gaps = 7/98 (7%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
Q+ + ++ I + +G+LGAV+G++ + S+
Sbjct: 123 QEFVRDVLMEDINATEDRHRSGALIFSQAGMYAPTLGVLGAVVGLIAALADL----SDME 178
Query: 170 VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFA 207
I + I+ LLG+ + ++ K+ +
Sbjct: 179 KLSHAIAAAFIATLLGIFTG---YVLWHPMSNKLKRLS 213
>gi|304438418|ref|ZP_07398358.1| chemotaxis protein MotA [Selenomonas sp. oral taxon 149 str.
67H29BP]
gi|304368501|gb|EFM22186.1| chemotaxis protein MotA [Selenomonas sp. oral taxon 149 str.
67H29BP]
Length = 263
Score = 36.3 bits (83), Expect = 2.9, Method: Composition-based stats.
Identities = 18/99 (18%), Positives = 40/99 (40%), Gaps = 7/99 (7%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
D + ++D +A E E S + +G+LGAV+G++ ++ ++
Sbjct: 128 DFVGDVLDAELAIMQERHAEGRSMFTQAGTYAPTLGVLGAVVGLIAALGNL----NDIDK 183
Query: 171 SIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQ 209
I + ++ +LG+ + + F K + Q
Sbjct: 184 LGHSIAAAFVATILGIFTG---YVLWMPFANKLKIMSEQ 219
>gi|225164038|ref|ZP_03726323.1| MotA/TolQ/ExbB proton channel [Opitutaceae bacterium TAV2]
gi|224801344|gb|EEG19655.1| MotA/TolQ/ExbB proton channel [Opitutaceae bacterium TAV2]
Length = 289
Score = 36.3 bits (83), Expect = 2.9, Method: Composition-based stats.
Identities = 19/100 (19%), Positives = 41/100 (41%), Gaps = 3/100 (3%)
Query: 90 SAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILG 149
+ E+ + + D+++ ++ + + EE + L + + +GI+
Sbjct: 120 AERREFLMNALRPVIDGRIKPDQLEELLGAELRAKAEEAEHPVHLLQLVGDSLPGIGIVA 179
Query: 150 AVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVS 189
AVLG++ SIA V + +L LLG+ +
Sbjct: 180 AVLGIINTMASIA---DGPEVVGLRVAAALTGTLLGVFFA 216
>gi|294679002|ref|YP_003579617.1| chemotaxis protein MotA [Rhodobacter capsulatus SB 1003]
gi|294477822|gb|ADE87210.1| chemotaxis protein MotA [Rhodobacter capsulatus SB 1003]
Length = 289
Score = 36.3 bits (83), Expect = 2.9, Method: Composition-based stats.
Identities = 19/117 (16%), Positives = 43/117 (36%), Gaps = 10/117 (8%)
Query: 97 KSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMG 156
+S P +++ +++ ++ + + S++ A +GI+ AVLG++
Sbjct: 132 RSASMNYDDPHQVEEVLEKQLEANYHHAMHSSHA----MQSIADAMPALGIVAAVLGVIK 187
Query: 157 FFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGF 213
SI + I +L+ LG+ ++ F K + F
Sbjct: 188 TMASI---DQPPEILGKMIGGALVGTFLGVFLA---YGFIGPFATRIKAVVDEDAHF 238
>gi|154174624|ref|YP_001408143.1| chemotaxis protein PomA [Campylobacter curvus 525.92]
gi|112802822|gb|EAU00166.1| chemotaxis protein PomA [Campylobacter curvus 525.92]
Length = 254
Score = 36.3 bits (83), Expect = 2.9, Method: Composition-based stats.
Identities = 16/126 (12%), Positives = 48/126 (38%), Gaps = 6/126 (4%)
Query: 66 GQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQ--DRIDRMMDVAIAR 123
+++ + G+ A+ +E + KG + D I ++++ + +
Sbjct: 74 AATIKKIVDYSTKARKDGILALENDVNNEVNQFLKKGLSMAVDGNEPDAIRALLEIDMDQ 133
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISIL 183
T + + +G++G ++G++ ++A + P + +L++ L
Sbjct: 134 SSARHTNNIKIFEQVGGFAGAMGMIGTLIGLVAMLLNMA----DPSAIGPSMAVALLTTL 189
Query: 184 LGLCVS 189
G +
Sbjct: 190 YGAMIG 195
>gi|227873542|ref|ZP_03991787.1| flagellar motor protein A [Oribacterium sinus F0268]
gi|227840632|gb|EEJ51017.1| flagellar motor protein A [Oribacterium sinus F0268]
Length = 275
Score = 36.3 bits (83), Expect = 3.0, Method: Composition-based stats.
Identities = 10/77 (12%), Positives = 29/77 (37%), Gaps = 2/77 (2%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSI--AGYYSNN 168
D++ ++ + + E S+ G++G ++G++ + + +G
Sbjct: 121 DKVRASLEHQVEDMMTRHEEAKGLYVKGSALAPAFGMIGTLVGLVNMLKGMDLSGSGGGA 180
Query: 169 VVSIPGIIESLISILLG 185
+ +LI+ G
Sbjct: 181 STLGQDMGVALITTFYG 197
>gi|86157811|ref|YP_464596.1| MotA/TolQ/ExbB proton channel [Anaeromyxobacter dehalogenans 2CP-C]
gi|85774322|gb|ABC81159.1| MotA/TolQ/ExbB proton channel [Anaeromyxobacter dehalogenans 2CP-C]
Length = 261
Score = 36.3 bits (83), Expect = 3.0, Method: Composition-based stats.
Identities = 16/77 (20%), Positives = 33/77 (42%), Gaps = 4/77 (5%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI 172
++ A+ + EE + VGILGAVLG++ +++ S+
Sbjct: 124 TRSTLEAAVDADFEERVVGAKVWEAAGGFAPTVGILGAVLGLIHVMENL----SDPSKLG 179
Query: 173 PGIIESLISILLGLCVS 189
GI + ++ + G+ +
Sbjct: 180 GGIAVAFVATVYGVGSA 196
>gi|57505871|ref|ZP_00371796.1| probable membrane protein Cj0598 [Campylobacter upsaliensis RM3195]
gi|57015901|gb|EAL52690.1| probable membrane protein Cj0598 [Campylobacter upsaliensis RM3195]
Length = 455
Score = 36.3 bits (83), Expect = 3.0, Method: Composition-based stats.
Identities = 9/96 (9%), Positives = 35/96 (36%), Gaps = 5/96 (5%)
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-----VSIPGIIESLIS 181
+ T +F ++ ++GILG + + + + + + + + G+ +
Sbjct: 122 KGTRNENFAAVGATIFPMMGILGTFISIALSMPNFSSSNTEALEQEIALLLSGVGTAFYV 181
Query: 182 ILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEF 217
+ G+ +++ ++ + + +F
Sbjct: 182 SIYGIFLALWWIFFEKIGSSKIQRLLNRQKNSTEDF 217
>gi|312962249|ref|ZP_07776741.1| chemotaxis MotA protein [Pseudomonas fluorescens WH6]
gi|311283586|gb|EFQ62175.1| chemotaxis MotA protein [Pseudomonas fluorescens WH6]
Length = 246
Score = 36.3 bits (83), Expect = 3.0, Method: Composition-based stats.
Identities = 16/115 (13%), Positives = 42/115 (36%), Gaps = 5/115 (4%)
Query: 75 SLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSF 134
+ + +GL + + + + + I +++V +
Sbjct: 87 TARKEGLLGLEGVADAEPDSYSR-KGLQLLVDGAEPEAIRSILEVDFYTQESRDINAAKV 145
Query: 135 LGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVS 189
SM +GI+GAV+G++ ++A + GI + ++ + G+ +
Sbjct: 146 FESMGGYAPTIGIIGAVMGLIHVMGNLA----DPSQLGSGIAVAFVATIYGVASA 196
>gi|149376620|ref|ZP_01894380.1| flagellar motor protein MotC [Marinobacter algicola DG893]
gi|149359138|gb|EDM47602.1| flagellar motor protein MotC [Marinobacter algicola DG893]
Length = 245
Score = 36.3 bits (83), Expect = 3.0, Method: Composition-based stats.
Identities = 20/114 (17%), Positives = 45/114 (39%), Gaps = 6/114 (5%)
Query: 78 NHHNIGLAAIFMSAMSEWKKSCDKGARS--PIGIQDRIDRMMDVAIARELEEITEKLSFL 135
GL + A E ++ KG + + I +M+V + + E
Sbjct: 87 KARKQGLLGLEGLAEKESERFARKGLQLLVDGAETETIRSIMEVDLESREQRDLESARVF 146
Query: 136 GSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVS 189
+M +GI+GAV+G++ ++ + GI + ++ + G+ ++
Sbjct: 147 EAMGGYSPTIGIIGAVMGLIQVMTNL----EDPQSLGSGIATAFVATIYGVALA 196
>gi|266624592|ref|ZP_06117527.1| putative membrane protein [Clostridium hathewayi DSM 13479]
gi|288863549|gb|EFC95847.1| putative membrane protein [Clostridium hathewayi DSM 13479]
Length = 212
Score = 36.3 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 20/104 (19%), Positives = 46/104 (44%), Gaps = 20/104 (19%)
Query: 93 SEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVL 152
E++++ + G + P R +A+A + + +G ++S G++ L
Sbjct: 113 DEYRQAVNSGYKQP-------QRQSSMALASLI------MGIIGIVTSCCCYGGLIFGSL 159
Query: 153 GMMGFFQSIAGYYSNNVVSIPGIIES-LISILLGLCVSIPSSIA 195
G++ S AG ++ G + LI+ ++GL ++ + I
Sbjct: 160 GILFALLSKAG------DTMEGYARAGLITSVIGLFLAAMALIF 197
>gi|297741515|emb|CBI32647.3| unnamed protein product [Vitis vinifera]
Length = 221
Score = 36.3 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 13/54 (24%), Positives = 20/54 (37%), Gaps = 7/54 (12%)
Query: 25 KCIITLLFIF-----SILSW--SVIIQKSVNFITLRRQFREFEQLFWSGQSLET 71
K + +L I SI+S V + K + F +LF G +E
Sbjct: 164 KGVHLVLVIMVSALVSIVSVLAVVAVYKYWQKRKREQDQARFLKLFEDGDDIED 217
>gi|225439813|ref|XP_002274085.1| PREDICTED: hypothetical protein [Vitis vinifera]
Length = 205
Score = 36.3 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 13/54 (24%), Positives = 20/54 (37%), Gaps = 7/54 (12%)
Query: 25 KCIITLLFIF-----SILSW--SVIIQKSVNFITLRRQFREFEQLFWSGQSLET 71
K + +L I SI+S V + K + F +LF G +E
Sbjct: 148 KGVHLVLVIMVSALVSIVSVLAVVAVYKYWQKRKREQDQARFLKLFEDGDDIED 201
>gi|77359763|ref|YP_339338.1| chemotaxis motA protein [Pseudoalteromonas haloplanktis TAC125]
gi|76874674|emb|CAI85895.1| putative Chemotaxis motA protein [Pseudoalteromonas haloplanktis
TAC125]
Length = 254
Score = 36.3 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 19/89 (21%), Positives = 38/89 (42%), Gaps = 5/89 (5%)
Query: 138 MSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSI-AY 196
M +GILGAVLG++ I ++ G+ + I+ + G+ ++ +
Sbjct: 149 MGGYSPTIGILGAVLGLIQAMSFI----TDPQKLGAGVATAFIATIYGVGLANLLFLPMA 204
Query: 197 NKFIEDSKKFAMQMEGFANEFSAILSRQT 225
NK + ++ + E A AI ++
Sbjct: 205 NKLKQRVEQKMLYHEMLAEGVIAISQGES 233
>gi|317153139|ref|YP_004121187.1| MotA/TolQ/ExbB proton channel [Desulfovibrio aespoeensis Aspo-2]
gi|316943390|gb|ADU62441.1| MotA/TolQ/ExbB proton channel [Desulfovibrio aespoeensis Aspo-2]
Length = 290
Score = 36.3 bits (83), Expect = 3.2, Method: Composition-based stats.
Identities = 22/104 (21%), Positives = 45/104 (43%), Gaps = 7/104 (6%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
++ I ++ +A + F +M+ G+ G+V+G++G I ++
Sbjct: 120 EEEIREALNSEMAFFNLRRQQSERFFQTMARMAPAFGVAGSVIGLIGLLMGI----NDTA 175
Query: 170 VSIPGIIESLISILLGLCVS--IPSSIAYNK-FIEDSKKFAMQM 210
V + I + IS L GL +S + S IA N + + ++
Sbjct: 176 VILKNIPVAFISTLYGLVLSNLVFSPIAENINYSTRVELLNQKL 219
>gi|146282903|ref|YP_001173056.1| flagellar motor protein MotA [Pseudomonas stutzeri A1501]
gi|145571108|gb|ABP80214.1| flagellar motor protein MotA [Pseudomonas stutzeri A1501]
Length = 208
Score = 36.3 bits (83), Expect = 3.2, Method: Composition-based stats.
Identities = 14/79 (17%), Positives = 34/79 (43%), Gaps = 4/79 (5%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ I +++V + + SM +GI+GAV+G++ ++A +
Sbjct: 84 EVIRSILEVDLYTQEGRDLRAAKVYESMGGYSPTIGIIGAVMGLIHVMGNLA----DPSQ 139
Query: 171 SIPGIIESLISILLGLCVS 189
GI + ++ + G+ +
Sbjct: 140 LGSGIAVAFVATIYGVAFA 158
>gi|94500547|ref|ZP_01307078.1| flagellar motor protein [Oceanobacter sp. RED65]
gi|94427337|gb|EAT12316.1| flagellar motor protein [Oceanobacter sp. RED65]
Length = 252
Score = 36.3 bits (83), Expect = 3.2, Method: Composition-based stats.
Identities = 12/121 (9%), Positives = 43/121 (35%), Gaps = 4/121 (3%)
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
++ + + GL A+ +S + + + ++ + +
Sbjct: 77 IDEIVELAGEARKNGLLALEGKEVSYDFLAKGIQLLVDGHDPEVVKTLLSKDMRLAADRH 136
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCV 188
+ + G +G++G ++G++ ++ + P + +L++ L G +
Sbjct: 137 NTGSAIFTQIGDVGPAMGMIGTLIGLVAMLANM----DDPKAIGPAMAVALLTTLYGAML 192
Query: 189 S 189
+
Sbjct: 193 A 193
>gi|315127297|ref|YP_004069300.1| chemotaxis motA protein [Pseudoalteromonas sp. SM9913]
gi|315015811|gb|ADT69149.1| chemotaxis motA protein [Pseudoalteromonas sp. SM9913]
Length = 254
Score = 36.3 bits (83), Expect = 3.2, Method: Composition-based stats.
Identities = 29/169 (17%), Positives = 67/169 (39%), Gaps = 11/169 (6%)
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGI------QDRIDRMMDVAI 121
+E + +K + +++ +E D A + + + ++ +++ +
Sbjct: 73 DIEDAIEQVKRWSHKARQEGYLALENEALAHSDPYAAKGLSLLVDGCSEQKLRDTLEIDL 132
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLIS 181
E E + + +M +GILGAVLG++ I ++ GI + I+
Sbjct: 133 LLERERLLDASRVYEAMGGYSPTIGILGAVLGLIQAMSFI----NDPEQLGTGIATAFIA 188
Query: 182 ILLGLCVSIPSSI-AYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGNI 229
+ G+ ++ + NK + ++ + E A AI ++ NI
Sbjct: 189 TIYGVGLANLLFLPMANKLKQRVEQKMLYHEMLAEGVIAISQGESPINI 237
>gi|198424225|ref|XP_002122044.1| PREDICTED: similar to Uromodulin precursor (Tamm-Horsfall urinary
glycoprotein) (THP) [Ciona intestinalis]
Length = 414
Score = 36.3 bits (83), Expect = 3.2, Method: Composition-based stats.
Identities = 8/36 (22%), Positives = 18/36 (50%)
Query: 20 MGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQ 55
+AV I +L + S++S+ V+ ++ R +
Sbjct: 378 AEIAVLFIAIVLLLASLVSFYVLPKRWQRQRRARTR 413
>gi|149176025|ref|ZP_01854642.1| hypothetical protein PM8797T_04200 [Planctomyces maris DSM 8797]
gi|148845179|gb|EDL59525.1| hypothetical protein PM8797T_04200 [Planctomyces maris DSM 8797]
Length = 268
Score = 36.3 bits (83), Expect = 3.2, Method: Composition-based stats.
Identities = 20/121 (16%), Positives = 47/121 (38%), Gaps = 7/121 (5%)
Query: 104 RSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA- 162
+ P+ Q+ + +M + L S L ++ G +VG++G+V G+ +++
Sbjct: 123 KDPMVSQENLVVLMQSKLNARLRLTELASSMLVTLGLVGTIVGLIGSVGGISVVVEAVGS 182
Query: 163 ---GYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
S ++ G+ + + LLG ++ I A + + E +
Sbjct: 183 NRDQLMSGMRETLGGMGTAFYTTLLG---ALFGGIVLRILSSVVNSHADSLIAYIAELAE 239
Query: 220 I 220
+
Sbjct: 240 V 240
>gi|260773299|ref|ZP_05882215.1| Flagellar motor rotation protein MotA [Vibrio metschnikovii CIP
69.14]
gi|260612438|gb|EEX37641.1| Flagellar motor rotation protein MotA [Vibrio metschnikovii CIP
69.14]
Length = 254
Score = 36.3 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 26/201 (12%), Positives = 67/201 (33%), Gaps = 24/201 (11%)
Query: 5 GLAIMDISIFALFMQMGLA----VKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
GLA + + A+ + L V ++ + S V F + + F
Sbjct: 12 GLAFV---LMAMVVGGSLVMFVDVTSVLIV-VGGSTFVVLVKFTMGQFFGAAKIAAKAF- 66
Query: 61 QLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDR-----IDR 115
+ + E + + + F+ A+ E + S + + D +
Sbjct: 67 --MFKAEEPEDLIAKIVEMADAARKGGFL-ALEEMEISNSFMQKGIDLLVDGHDADVVRT 123
Query: 116 MMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGI 175
+ I E + +G++G ++G++ ++ + P +
Sbjct: 124 ALQKDIVLTDERHELGTGVFRAFGDVAPAMGMIGTLIGLVAMLSNM----DDPKAIGPAM 179
Query: 176 IESLISILLGLCVSIPSSIAY 196
+L++ L G +I +++ +
Sbjct: 180 AVALLTTLYG---AIMANMIF 197
>gi|167013347|pdb|2Z2S|A Chain A, Crystal Structure Of Rhodobacter Sphaeroides Sige In
Complex With The Anti-Sigma Chrr
gi|167013349|pdb|2Z2S|C Chain C, Crystal Structure Of Rhodobacter Sphaeroides Sige In
Complex With The Anti-Sigma Chrr
gi|167013351|pdb|2Z2S|E Chain E, Crystal Structure Of Rhodobacter Sphaeroides Sige In
Complex With The Anti-Sigma Chrr
gi|167013353|pdb|2Z2S|G Chain G, Crystal Structure Of Rhodobacter Sphaeroides Sige In
Complex With The Anti-Sigma Chrr
Length = 184
Score = 36.3 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 21/108 (19%), Positives = 34/108 (31%), Gaps = 15/108 (13%)
Query: 34 FSILSWSVIIQKSVNFITLRR-QFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAM 92
S+ +W I ++ LR+ + E E LFW + A
Sbjct: 77 ASVATWIFTIARNRRIDGLRKDRQPEPEDLFW-------------GPDSEPDQADVYEXQ 123
Query: 93 SEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSS 140
E + AR P + I+R + L LG++ S
Sbjct: 124 QENARLGRAIARLPEAQRALIERAFFGDLTHRELAAETGLP-LGTIKS 170
>gi|146278782|ref|YP_001168941.1| flagellar motor protein MotA [Rhodobacter sphaeroides ATCC 17025]
gi|145557023|gb|ABP71636.1| MotA/TolQ/ExbB proton channel [Rhodobacter sphaeroides ATCC 17025]
Length = 289
Score = 36.3 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 24/134 (17%), Positives = 49/134 (36%), Gaps = 10/134 (7%)
Query: 97 KSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMG 156
++ P +++ +D+ ++ A L L SM+ A +GI+ AVLG++
Sbjct: 132 RAASMNYDDPHQVEEVLDKRVEKAQHHALHSSHA----LQSMADALPALGIVAAVLGVIK 187
Query: 157 FFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANE 216
SI + I +L+ LG+ ++ F + + F N
Sbjct: 188 TMSSI---DQPPEILGKMIGGALVGTFLGVFLAYGLV---GPFATRVRAVIEEDGHFYNL 241
Query: 217 FSAILSRQTEGNIS 230
+L + +
Sbjct: 242 IREVLIANLHNHPA 255
>gi|161521535|ref|YP_001584962.1| MotA/TolQ/ExbB proton channel [Burkholderia multivorans ATCC 17616]
gi|189352296|ref|YP_001947923.1| chemotaxis MotA protein [Burkholderia multivorans ATCC 17616]
gi|160345585|gb|ABX18670.1| MotA/TolQ/ExbB proton channel [Burkholderia multivorans ATCC 17616]
gi|189336318|dbj|BAG45387.1| chemotaxis MotA protein [Burkholderia multivorans ATCC 17616]
Length = 254
Score = 36.3 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 23/155 (14%), Positives = 49/155 (31%), Gaps = 13/155 (8%)
Query: 38 SWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKK 97
+W+ + + ++ L K + ++ ++ + + +
Sbjct: 52 TWARFVDAVKQLRLAFVRATAADRK--HLSDLLEWGDRAKLEGLLAFESMDVTGIHPFAR 109
Query: 98 S---CDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGM 154
S I+D + R +D L GILG+VLG+
Sbjct: 110 RGLELLANGMSTAVIEDALQRELDAYERSHLAAARVWQQ----AGGYAPTFGILGSVLGL 165
Query: 155 MGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVS 189
+ + G+ PGI + ++ L GL +
Sbjct: 166 VQ----VTGHILEPAQLGPGIAVAFVATLYGLAFA 196
>gi|312793259|ref|YP_004026182.1| mota/tolq/exbb proton channel [Caldicellulosiruptor kristjanssonii
177R1B]
gi|312180399|gb|ADQ40569.1| MotA/TolQ/ExbB proton channel [Caldicellulosiruptor kristjanssonii
177R1B]
Length = 265
Score = 36.3 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 20/126 (15%), Positives = 46/126 (36%), Gaps = 6/126 (4%)
Query: 66 GQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDR--IDRMMDVAIAR 123
+E + + GL A+ + KG + + I ++D +
Sbjct: 75 ASVVEQLVQLSDRARKEGLLALEQEIPNIQNPLLKKGLGLVVDGIEGEVIRDILDREVYL 134
Query: 124 ELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISIL 183
+E+ E + +GI+G V+G++ ++ +N P I + ++ L
Sbjct: 135 AEDELKEAAEVFEAAGGYAPTMGIIGTVMGLISVLSNL----TNPDELGPAIAVAFVATL 190
Query: 184 LGLCVS 189
G+ +
Sbjct: 191 YGVSSA 196
>gi|183222195|ref|YP_001840191.1| chemotaxis MotA protein [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Paris)']
gi|189912249|ref|YP_001963804.1| endoflagellar motor protein [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167776925|gb|ABZ95226.1| Endoflagellar motor protein [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167780617|gb|ABZ98915.1| Chemotaxis MotA protein; putative membrane protein; putative signal
peptide [Leptospira biflexa serovar Patoc strain 'Patoc
1 (Paris)']
Length = 245
Score = 36.3 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 13/77 (16%), Positives = 32/77 (41%), Gaps = 3/77 (3%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI 172
I+ ++ A + + + + + +GI+G VLG++ +++ G
Sbjct: 122 IEEILWEAHEEKEKVDLKSAKIFETAAGFSPTIGIIGTVLGLVTVLENLDG---GTKALG 178
Query: 173 PGIIESLISILLGLCVS 189
GI + I+ G+ +
Sbjct: 179 QGIATAFIATFYGISFA 195
>gi|78485865|ref|YP_391790.1| MotA/TolQ/ExbB proton channel [Thiomicrospira crunogena XCL-2]
gi|78364151|gb|ABB42116.1| MotA/TolQ/ExbB family protein [Thiomicrospira crunogena XCL-2]
Length = 255
Score = 36.3 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 12/80 (15%), Positives = 34/80 (42%), Gaps = 4/80 (5%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
++ I + + +E T S+ A G++G ++G++ ++ S+
Sbjct: 120 KEVIKQSLMEENKLFVERATTSAGVFSSIGGAAPAFGMIGTLVGLIQMLSNL----SDPS 175
Query: 170 VSIPGIIESLISILLGLCVS 189
P + ++++ L G ++
Sbjct: 176 SIGPAMAVAMLTTLYGAMIA 195
>gi|68164501|gb|AAY87230.1| predicted flagellar motor component [uncultured bacterium BAC17H8]
Length = 253
Score = 36.3 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 9/77 (11%), Positives = 29/77 (37%), Gaps = 4/77 (5%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI 172
+ + I + + +G++G ++G++ ++A +
Sbjct: 121 LTAQLKQEIKSMKSRHEANQGVIKAWVDLAPAMGMIGTLIGLVLMLGNMA----DPKAIG 176
Query: 173 PGIIESLISILLGLCVS 189
P + +L++ L G ++
Sbjct: 177 PAMAVALLTTLYGAFIA 193
>gi|332291032|ref|YP_004429641.1| biopolymer transport protein [Krokinobacter diaphorus 4H-3-7-5]
gi|332169118|gb|AEE18373.1| putative biopolymer transport protein [Krokinobacter diaphorus
4H-3-7-5]
Length = 124
Score = 36.3 bits (83), Expect = 3.6, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 31/75 (41%), Gaps = 7/75 (9%)
Query: 115 RMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-VVSIP 173
+M R EI LS + G LG+ LG++ F +I G + + +
Sbjct: 33 SLMGKRAKRATSEIISHLSLFAM------MWGFLGSTLGLITAFDAIEGSGNISQPMMAG 86
Query: 174 GIIESLISILLGLCV 188
G+ +L+ L GL
Sbjct: 87 GLKVALLCTLFGLFT 101
>gi|222824333|ref|YP_002575907.1| flagellar motor component MotA [Campylobacter lari RM2100]
gi|222539554|gb|ACM64655.1| flagellar motor component MotA [Campylobacter lari RM2100]
Length = 257
Score = 36.3 bits (83), Expect = 3.6, Method: Composition-based stats.
Identities = 10/51 (19%), Positives = 22/51 (43%), Gaps = 4/51 (7%)
Query: 139 SSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVS 189
+G++GAV+G+M Q + + GI + + + G+ +
Sbjct: 150 GETCPTMGLVGAVMGLMLALQLL----DDPQAMAAGIAGAFTATVTGIFGA 196
>gi|124004043|ref|ZP_01688890.1| transporter, MotA/TolQ/ExbB proton channel family, putative
[Microscilla marina ATCC 23134]
gi|123990622|gb|EAY30102.1| transporter, MotA/TolQ/ExbB proton channel family, putative
[Microscilla marina ATCC 23134]
Length = 131
Score = 36.3 bits (83), Expect = 3.6, Method: Composition-based stats.
Identities = 20/99 (20%), Positives = 43/99 (43%), Gaps = 1/99 (1%)
Query: 112 RIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYS-NNVV 170
R+ + VA +++ L + + S + GILG ++G+ F ++ + + +
Sbjct: 32 RLGLELFVAERALKPRVSKSLDTIIYLGSFSFIFGILGQLVGLYEAFNVLSKVGAVSPKI 91
Query: 171 SIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQ 209
+ G+ S I L G + + +SI + F + Q
Sbjct: 92 LMAGLKVSTIPTLYGFGILLVASIVWFVFRRKLQSLTDQ 130
>gi|298346000|ref|YP_003718687.1| flagellar motor protein A [Mobiluncus curtisii ATCC 43063]
gi|304390242|ref|ZP_07372196.1| chemotaxis MotA protein [Mobiluncus curtisii subsp. curtisii ATCC
35241]
gi|315657507|ref|ZP_07910389.1| chemotaxis MotA protein [Mobiluncus curtisii subsp. holmesii ATCC
35242]
gi|298236061|gb|ADI67193.1| flagellar motor protein A [Mobiluncus curtisii ATCC 43063]
gi|304326724|gb|EFL93968.1| chemotaxis MotA protein [Mobiluncus curtisii subsp. curtisii ATCC
35241]
gi|315491979|gb|EFU81588.1| chemotaxis MotA protein [Mobiluncus curtisii subsp. holmesii ATCC
35242]
Length = 259
Score = 36.3 bits (83), Expect = 3.7, Method: Composition-based stats.
Identities = 24/173 (13%), Positives = 58/173 (33%), Gaps = 14/173 (8%)
Query: 57 REFEQLFWSGQS-LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQD--RI 113
+ F ++T+ + GL A+ +A + +G + I D +
Sbjct: 65 KAFTAKVPDATDAIDTIVSLSEKARREGLLALEDAAKGIEDQFMREGLMAAIDGMDPEDL 124
Query: 114 DRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP 173
M+ I + F +GI+G V+ ++ ++ + P
Sbjct: 125 RSMLSDKIEARKQSDKSAYGFFKQAGGYAPTIGIIGTVISLVHVLTQLSEPET----LGP 180
Query: 174 GIIESLISILLGLCVSIPSSIAYNKFIEDSKKFA----MQMEGFANEFSAILS 222
I + ++ L GL + ++ + ++ + +ME ++ S
Sbjct: 181 LIASAFVATLWGLMSA---NMIWLPLSSRMERISTLELARMEIVTEGLISLQS 230
>gi|315654588|ref|ZP_07907494.1| chemotaxis MotA protein [Mobiluncus curtisii ATCC 51333]
gi|315491052|gb|EFU80671.1| chemotaxis MotA protein [Mobiluncus curtisii ATCC 51333]
Length = 259
Score = 36.3 bits (83), Expect = 3.7, Method: Composition-based stats.
Identities = 24/173 (13%), Positives = 58/173 (33%), Gaps = 14/173 (8%)
Query: 57 REFEQLFWSGQS-LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQD--RI 113
+ F ++T+ + GL A+ +A + +G + I D +
Sbjct: 65 KAFTAKVPDATDAIDTIVSLSEKARREGLLALEDAAKGIEDQFMREGLMAAIDGMDPEDL 124
Query: 114 DRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP 173
M+ I + F +GI+G V+ ++ ++ + P
Sbjct: 125 RSMLSDKIEARKQSDKSAYGFFKQAGGYAPTIGIIGTVISLVHVLTQLSEPET----LGP 180
Query: 174 GIIESLISILLGLCVSIPSSIAYNKFIEDSKKFA----MQMEGFANEFSAILS 222
I + ++ L GL + ++ + ++ + +ME ++ S
Sbjct: 181 LIASAFVATLWGLMSA---NMIWLPLSSRMERISTLELARMEIVTEGLISLQS 230
>gi|90409244|ref|ZP_01217350.1| hypothetical protein PCNPT3_00050 [Psychromonas sp. CNPT3]
gi|90309654|gb|EAS37833.1| hypothetical protein PCNPT3_00050 [Psychromonas sp. CNPT3]
Length = 176
Score = 36.3 bits (83), Expect = 3.8, Method: Composition-based stats.
Identities = 10/32 (31%), Positives = 15/32 (46%)
Query: 179 LISILLGLCVSIPSSIAYNKFIEDSKKFAMQM 210
L+ LG+ V+I S YN + K A +
Sbjct: 70 LLITALGIGVAILSVWGYNNIKSSTNKIASDL 101
>gi|310639573|ref|YP_003944331.1| mota/tolq/exbb proton channel [Paenibacillus polymyxa SC2]
gi|309244523|gb|ADO54090.1| MotA/TolQ/ExbB proton channel [Paenibacillus polymyxa SC2]
Length = 264
Score = 35.9 bits (82), Expect = 3.8, Method: Composition-based stats.
Identities = 15/98 (15%), Positives = 35/98 (35%), Gaps = 7/98 (7%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
Q+ + ++ I + +G+LGAV+G++ + S+
Sbjct: 123 QEFVRDVLMEDINATEDRHRAGALIFSQAGMYAPTLGVLGAVVGLIAALADL----SDME 178
Query: 170 VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFA 207
I + I+ LLG+ + ++ K+ +
Sbjct: 179 KLSHAIAAAFIATLLGIFTG---YVLWHPMSNKLKRLS 213
>gi|222529064|ref|YP_002572946.1| MotA/TolQ/ExbB proton channel [Caldicellulosiruptor bescii DSM
6725]
gi|222455911|gb|ACM60173.1| MotA/TolQ/ExbB proton channel [Caldicellulosiruptor bescii DSM
6725]
Length = 265
Score = 35.9 bits (82), Expect = 3.8, Method: Composition-based stats.
Identities = 20/122 (16%), Positives = 45/122 (36%), Gaps = 6/122 (4%)
Query: 70 ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDR--IDRMMDVAIARELEE 127
E + + GL A+ + KG + + I ++D + +E
Sbjct: 79 EQLVQLSDRARKEGLLALEQEIPNIQNPLLKKGLGLVVDGIEGEVIRDILDREVYLAEDE 138
Query: 128 ITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLC 187
+ E + +GI+G V+G++ ++ +N P I + ++ L G+
Sbjct: 139 LKEAAEVFEAAGGYSPTMGIIGTVMGLISVLSNL----TNPDELGPAIAVAFVATLYGVS 194
Query: 188 VS 189
+
Sbjct: 195 SA 196
>gi|195953008|ref|YP_002121298.1| MotA/TolQ/ExbB proton channel [Hydrogenobaculum sp. Y04AAS1]
gi|195932620|gb|ACG57320.1| MotA/TolQ/ExbB proton channel [Hydrogenobaculum sp. Y04AAS1]
Length = 244
Score = 35.9 bits (82), Expect = 3.8, Method: Composition-based stats.
Identities = 10/51 (19%), Positives = 22/51 (43%), Gaps = 4/51 (7%)
Query: 137 SMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLC 187
+ S +G+ GAV G+M + ++ GI + ++ + G+
Sbjct: 147 TCSETSPTMGLTGAVFGLMHALTEL----NDPNKLAEGISTAFVATIYGIA 193
>gi|224418308|ref|ZP_03656314.1| motility protein A-flagellar motor component [Helicobacter
canadensis MIT 98-5491]
gi|253827630|ref|ZP_04870515.1| flagellar motor component MotA [Helicobacter canadensis MIT
98-5491]
gi|313141839|ref|ZP_07804032.1| motility protein a-flagellar motor [Helicobacter canadensis MIT
98-5491]
gi|253511036|gb|EES89695.1| flagellar motor component MotA [Helicobacter canadensis MIT
98-5491]
gi|313130870|gb|EFR48487.1| motility protein a-flagellar motor [Helicobacter canadensis MIT
98-5491]
Length = 254
Score = 35.9 bits (82), Expect = 3.8, Method: Composition-based stats.
Identities = 16/79 (20%), Positives = 35/79 (44%), Gaps = 4/79 (5%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
D I ++++ + R LE + ++ G+LG ++G++ ++ S+
Sbjct: 121 DSIRSLLEMDLDRTLERHKANAGIFDTWAAYAGAYGMLGTLIGLVAMLLNM----SDPSS 176
Query: 171 SIPGIIESLISILLGLCVS 189
P + +LI+ L G V
Sbjct: 177 IGPAMAVALITTLYGSMVG 195
>gi|117925242|ref|YP_865859.1| MotA/TolQ/ExbB proton channel [Magnetococcus sp. MC-1]
gi|117608998|gb|ABK44453.1| MotA/TolQ/ExbB proton channel [Magnetococcus sp. MC-1]
Length = 250
Score = 35.9 bits (82), Expect = 3.9, Method: Composition-based stats.
Identities = 9/85 (10%), Positives = 34/85 (40%), Gaps = 8/85 (9%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ ++ ++ + + ++ + G++G ++G++ ++ +
Sbjct: 119 EFLESVLRKDLEYLASRHGKGVAIWEGIGETAPAFGMIGTLIGLVQMLATM----DDPSS 174
Query: 171 SIPGIIESLISILLGL----CVSIP 191
P + +L++ L G ++IP
Sbjct: 175 IGPAMAVALLTTLYGSIFANVIAIP 199
>gi|148269400|ref|YP_001243860.1| MotA/TolQ/ExbB proton channel [Thermotoga petrophila RKU-1]
gi|170288057|ref|YP_001738295.1| MotA/TolQ/ExbB proton channel [Thermotoga sp. RQ2]
gi|281411903|ref|YP_003345982.1| MotA/TolQ/ExbB proton channel [Thermotoga naphthophila RKU-10]
gi|147734944|gb|ABQ46284.1| MotA/TolQ/ExbB proton channel [Thermotoga petrophila RKU-1]
gi|170175560|gb|ACB08612.1| MotA/TolQ/ExbB proton channel [Thermotoga sp. RQ2]
gi|281373006|gb|ADA66568.1| MotA/TolQ/ExbB proton channel [Thermotoga naphthophila RKU-10]
Length = 262
Score = 35.9 bits (82), Expect = 3.9, Method: Composition-based stats.
Identities = 12/57 (21%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
Query: 133 SFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVS 189
+ L S + G++G ++G++ +S+ +N P + +LI+ L G ++
Sbjct: 144 AVLESAGAYAPAFGMIGTLIGLIQMLKSL----NNPETLGPSMAVALITTLYGAVLA 196
>gi|329888438|ref|ZP_08267036.1| chemotaxis protein motA [Brevundimonas diminuta ATCC 11568]
gi|328846994|gb|EGF96556.1| chemotaxis protein motA [Brevundimonas diminuta ATCC 11568]
Length = 289
Score = 35.9 bits (82), Expect = 3.9, Method: Composition-based stats.
Identities = 22/134 (16%), Positives = 46/134 (34%), Gaps = 10/134 (7%)
Query: 97 KSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMG 156
+ P I+D +++ ++ L L +++ +GI+ AVLG++
Sbjct: 133 RMMTMNLEDPHQIEDAMEKQLEKHHHEALAPAHA----LQTLADGLPALGIVAAVLGIIK 188
Query: 157 FFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANE 216
SI V I +L+ LG+ ++ F + +
Sbjct: 189 TMGSIT---EPPEVLGGMIGGALVGTFLGVFLAYGLV---GPFASRLNAIVEEEGAYYKI 242
Query: 217 FSAILSRQTEGNIS 230
++L GN +
Sbjct: 243 IQSVLVAHLHGNAA 256
>gi|126730125|ref|ZP_01745937.1| flagellar motor protein MotA [Sagittula stellata E-37]
gi|126709505|gb|EBA08559.1| flagellar motor protein MotA [Sagittula stellata E-37]
Length = 289
Score = 35.9 bits (82), Expect = 3.9, Method: Composition-based stats.
Identities = 27/144 (18%), Positives = 52/144 (36%), Gaps = 10/144 (6%)
Query: 46 SVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARS 105
I L RQ + S T+ + I + + + +S
Sbjct: 84 LFELIRLARQNPVAIEEHIESPSESTIF---GKYPKILGDKYAIELICDTMRSVSMNYDD 140
Query: 106 PIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYY 165
P +++ +D+ ++ + L SM+ A +GI+ AVLG++ SI
Sbjct: 141 PHQVEEVLDKRLEGMEHHAMHSSHA----LQSMADALPALGIVAAVLGVIKTMASI---D 193
Query: 166 SNNVVSIPGIIESLISILLGLCVS 189
V I +L+ LG+ ++
Sbjct: 194 QPPEVLGKLIGGALVGTFLGVFLA 217
>gi|23099680|ref|NP_693146.1| flagellar motor protein MotP [Oceanobacillus iheyensis HTE831]
gi|22777910|dbj|BAC14181.1| flagellar motor aparatus [Oceanobacillus iheyensis HTE831]
Length = 275
Score = 35.9 bits (82), Expect = 3.9, Method: Composition-based stats.
Identities = 22/176 (12%), Positives = 61/176 (34%), Gaps = 16/176 (9%)
Query: 20 MGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNH 79
++ I+ S+ +I K +R +E S +S+ + + +
Sbjct: 36 ADISSIFIVIGGLTASM----LITFKMEQIRLTKRVLKEAFHK--SQRSIPQLIQLFIHL 89
Query: 80 HNIGLAAIFMSAMSEWKKSCDKGARSPIGIQ------DRIDRMMDVAIARELEEITEKLS 133
+ ++ +E + D R + + + I ++ I + +
Sbjct: 90 SDRARREGILALENELDEVEDPFIRKGMMLAVDGVEPEVITDILTAEITAMEDRHYKGRQ 149
Query: 134 FLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVS 189
+ + G++G ++G++ +A S P + +L++ L G ++
Sbjct: 150 LIEKAAEYAPAWGMIGTLIGLVLMLNKLAEPAS----LGPSMAVALLTTLYGTVLA 201
>gi|327441665|dbj|BAK18030.1| uncharacterized Fe-S protein [Solibacillus silvestris StLB046]
Length = 168
Score = 35.9 bits (82), Expect = 4.0, Method: Composition-based stats.
Identities = 16/64 (25%), Positives = 27/64 (42%), Gaps = 11/64 (17%)
Query: 25 KCIITLLFIFSILSWSVIIQKSVNFITLR-----------RQFREFEQLFWSGQSLETVC 73
K I +L + SI+ W + ++S+ F R + EF+ +F L V
Sbjct: 3 KWIFIILVLLSIIVWFIPFERSITFTETRVEKPVQHFLPLKNENEFQLVFTHSIHLTDVT 62
Query: 74 KSLK 77
+S K
Sbjct: 63 ESYK 66
>gi|320355209|ref|YP_004196548.1| biopolymer transport protein-like protein [Desulfobulbus
propionicus DSM 2032]
gi|320123711|gb|ADW19257.1| biopolymer transport protein-like protein [Desulfobulbus
propionicus DSM 2032]
Length = 201
Score = 35.9 bits (82), Expect = 4.0, Method: Composition-based stats.
Identities = 15/103 (14%), Positives = 38/103 (36%), Gaps = 3/103 (2%)
Query: 116 MMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGI 175
++ + E+ + + L + G +G+LG ++ M S+ + +
Sbjct: 95 AVENLLQSTTLELWKSMDRLRILVRTGPSLGLLGTLIPMGTGLASLG--QGDMTKLSSDL 152
Query: 176 IESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFS 218
+ + + ++G+ V + Y ++ ME A E
Sbjct: 153 VIAFTTTVVGMAVGTVAFCFYTLRRRWLEEDIKNME-LATELL 194
>gi|325108772|ref|YP_004269840.1| hypothetical protein Plabr_2216 [Planctomyces brasiliensis DSM
5305]
gi|324969040|gb|ADY59818.1| hypothetical protein Plabr_2216 [Planctomyces brasiliensis DSM
5305]
Length = 216
Score = 35.9 bits (82), Expect = 4.0, Method: Composition-based stats.
Identities = 28/196 (14%), Positives = 57/196 (29%), Gaps = 32/196 (16%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
MN A+ ++S + L + LL W +R R
Sbjct: 1 MNTILSALAELSTW-LIAVAACLHLGVFLLL-----WGW------------AKRDMRVL- 41
Query: 61 QLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVA 120
+L+ + L+ + A M + + P +R +
Sbjct: 42 -----AGTLQDYTRDLRQRSVLDPTAHLTDQMEAFIADIEDVINDPSRTDERQQLRNRIN 96
Query: 121 IARELEEITEKLSFLGSMSSAG-------LLVGILGAVLGMMGFFQSIAGYYSNNVVSIP 173
+ E L F +++++ L G+LG ++ + A V +
Sbjct: 97 VLDEKRRYLHALRF-ETIANSARTMIEAYPLAGVLGTIISIGAALNVSASEVDTVSVIVA 155
Query: 174 GIIESLISILLGLCVS 189
+++ S GL
Sbjct: 156 RFGDAIWSTFAGLTAG 171
>gi|260892161|ref|YP_003238258.1| MotA/TolQ/ExbB proton channel [Ammonifex degensii KC4]
gi|260864302|gb|ACX51408.1| MotA/TolQ/ExbB proton channel [Ammonifex degensii KC4]
Length = 265
Score = 35.9 bits (82), Expect = 4.0, Method: Composition-based stats.
Identities = 16/101 (15%), Positives = 35/101 (34%), Gaps = 7/101 (6%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ + +M+ + E +GI+G V+G++ + S+
Sbjct: 122 ELVKSIMETELYAMQERHRIAQEIFNQAGGYAPTMGIIGTVMGLIHVLSHL----SSPEA 177
Query: 171 SIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
P I + + L G+ + + I Y K + + E
Sbjct: 178 LGPAIAMAFTATLYGVSSA--NLIFY-PIAARLKNLSAKEE 215
>gi|330830901|ref|YP_004393853.1| chemotaxis protein PomA [Aeromonas veronii B565]
gi|328806037|gb|AEB51236.1| Chemotaxis protein PomA [Aeromonas veronii B565]
Length = 252
Score = 35.9 bits (82), Expect = 4.1, Method: Composition-based stats.
Identities = 31/206 (15%), Positives = 73/206 (35%), Gaps = 30/206 (14%)
Query: 9 MDI-SIFALFMQMGLAVKCIITLLFI--FSIL----SWSVIIQKSVNFITLRRQFREFEQ 61
MD+ S+ + + G+ V +L S+ S + + S+ ++ +F
Sbjct: 1 MDLGSLIGIVLGFGVVVYG---MLLGGPMSMYVDMPSVYITVLGSIFIAMMKFNLGQFLM 57
Query: 62 LFW--------SGQSLETVCKSLKNHHNIGLAAIFMSA-MSEWKKSCDKGARS---PIGI 109
F G LE + + F++ +E + K
Sbjct: 58 AFKVAGKAFMYKGDKLEDLITKAVELADAARKGGFLALEAAEIPNAFMKKGIDMLVDGHD 117
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
+ + +M+ I E + ++ G +G++G ++G++ ++ S+
Sbjct: 118 AEVVRAVMEKDIDLTAERHVIAIKVFRTLGDLGPAMGMIGTLVGLVAMLANM----SDPK 173
Query: 170 VSIPGIIESLISILLGLC----VSIP 191
P + +L++ L G ++IP
Sbjct: 174 SIGPAMAVALLTTLYGAIEANMLAIP 199
>gi|217077697|ref|YP_002335415.1| motility protein A [Thermosipho africanus TCF52B]
gi|217037552|gb|ACJ76074.1| motility protein A [Thermosipho africanus TCF52B]
Length = 262
Score = 35.9 bits (82), Expect = 4.1, Method: Composition-based stats.
Identities = 12/79 (15%), Positives = 37/79 (46%), Gaps = 4/79 (5%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ + M+++ + E+ K ++ + G++G ++G++ +S+ ++
Sbjct: 122 EVLKSMLEIEVEVASNEMNLKKGLFEAIGAYAPAFGMIGTLIGLIQMLKSL----NDPNS 177
Query: 171 SIPGIIESLISILLGLCVS 189
P + +LI+ L G ++
Sbjct: 178 LGPSMAVALITTLYGSIMA 196
>gi|146339832|ref|YP_001204880.1| hypothetical protein BRADO2833 [Bradyrhizobium sp. ORS278]
gi|146192638|emb|CAL76643.1| conserved hypothetical protein; putative membrane protein
[Bradyrhizobium sp. ORS278]
Length = 259
Score = 35.9 bits (82), Expect = 4.1, Method: Composition-based stats.
Identities = 27/163 (16%), Positives = 59/163 (36%), Gaps = 16/163 (9%)
Query: 63 FWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARS----PIGIQDRIDRMMD 118
FW +++ + + + + A+ + KG + + + R
Sbjct: 72 FWRTRAIAREADAARGCRAVLVGPDAERALEPDAQLLPKGLVTNHIKSLVTKARTQAAGR 131
Query: 119 VAIARELEEITEKL---SFLGSMSSAGLL-VGILGAVLGMMGFFQSIAG--------YYS 166
+ L + ++L + G +S L+ +G+LG ++G + IAG S
Sbjct: 132 LDQTLLLRTLADRLRGSNGFGGFASDTLMKLGLLGTIIGFIIMLAPIAGLDVNDKLAMKS 191
Query: 167 NNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQ 209
+ + G+ ++ + L GL SI I Y + +
Sbjct: 192 SMGLMSDGMAVAMYTTLAGLVGSILVRIQYYMLDAATGRVFSD 234
>gi|291390064|ref|XP_002711533.1| PREDICTED: serine protease inhibitor, Kunitz type, 2-like
[Oryctolagus cuniculus]
Length = 345
Score = 35.9 bits (82), Expect = 4.1, Method: Composition-based stats.
Identities = 9/52 (17%), Positives = 17/52 (32%), Gaps = 10/52 (19%)
Query: 27 IITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFW-SGQSLETVCKSLK 77
++ LL S++ R++ + W S E + KS
Sbjct: 301 VLILLLGASVVCL---------IRVARKRQERALRTVWSSADDKEQLVKSTG 343
>gi|332526060|ref|ZP_08402198.1| oxygen-independent coproporphyrinogen III oxidase [Rubrivivax
benzoatilyticus JA2]
gi|332109903|gb|EGJ10531.1| oxygen-independent coproporphyrinogen III oxidase [Rubrivivax
benzoatilyticus JA2]
Length = 450
Score = 35.9 bits (82), Expect = 4.2, Method: Composition-based stats.
Identities = 21/130 (16%), Positives = 43/130 (33%), Gaps = 12/130 (9%)
Query: 27 IITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAA 86
++ L ++ SW I + + R + + W V ++ + L A
Sbjct: 213 VMIGLPRQTMASWCTTIDRLIAMGPERIRLARYHHRPWHAP--AQVAIDTESLPSPALMA 270
Query: 87 IFMSAMSEWKKSCD---KGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
A +E ++ GA + D + MD + L + + A
Sbjct: 271 ELARASAEMLRNAGYRWIGADQFVLEHDDLSHAMDDG------RLRRSLISY-TAAPATP 323
Query: 144 LVGILGAVLG 153
L+G+ +G
Sbjct: 324 LIGLGVGAVG 333
>gi|239906260|ref|YP_002953000.1| chemotaxis protein MotA [Desulfovibrio magneticus RS-1]
gi|239796125|dbj|BAH75114.1| chemotaxis protein MotA [Desulfovibrio magneticus RS-1]
Length = 267
Score = 35.9 bits (82), Expect = 4.2, Method: Composition-based stats.
Identities = 19/118 (16%), Positives = 48/118 (40%), Gaps = 4/118 (3%)
Query: 72 VCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEK 131
+ + + I L +E+ ++ + ++ I ++D I + ++
Sbjct: 84 IAREASSRGKIHLEQALPGIENEFLQNAVQMLVDGYS-REEIKEILDTRIEQTYQQELSS 142
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVS 189
+M+ GI+G ++G++G QS++ N + +L + L G+ +S
Sbjct: 143 AGIYRTMAKLAPAYGIIGTLIGLIGMMQSMSVGLGN---LGAHMAVALTTTLYGILLS 197
>gi|222872324|gb|EEF09455.1| predicted protein [Populus trichocarpa]
Length = 190
Score = 35.9 bits (82), Expect = 4.2, Method: Composition-based stats.
Identities = 18/77 (23%), Positives = 33/77 (42%), Gaps = 3/77 (3%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI 172
I+ +MD I E ++ L ++ A GI+ AVLG++ + V
Sbjct: 49 IESLMDSEIEAHHAEAHAPVNALTRLAGALPAFGIIAAVLGVVNT---MGSVGQPPSVLG 105
Query: 173 PGIIESLISILLGLCVS 189
I +L+ LG+ ++
Sbjct: 106 GMIASALVGTFLGILLA 122
>gi|237653595|ref|YP_002889909.1| flagellar motor protein [Thauera sp. MZ1T]
gi|237624842|gb|ACR01532.1| MotA/TolQ/ExbB proton channel [Thauera sp. MZ1T]
Length = 246
Score = 35.9 bits (82), Expect = 4.2, Method: Composition-based stats.
Identities = 19/110 (17%), Positives = 42/110 (38%), Gaps = 5/110 (4%)
Query: 112 RIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVS 171
R+ +++V I ++ + +GILGAV+G++ +++ S+
Sbjct: 123 RLREVLEVEIGVWENQMKMSARIWEAAGGYAPTIGILGAVMGLIHVMENL----SDPSRL 178
Query: 172 IPGIIESLISILLGLCVSIPSSI-AYNKFIEDSKKFAMQMEGFANEFSAI 220
GI + ++ + G+ + + K Q E F + I
Sbjct: 179 GAGIAVAFVATIYGVGFANLVFLPIAKKLGAHIVTLTTQREMFVDGLVGI 228
>gi|222112257|ref|YP_002554521.1| mota/tolq/exbb proton channel [Acidovorax ebreus TPSY]
gi|221731701|gb|ACM34521.1| MotA/TolQ/ExbB proton channel [Acidovorax ebreus TPSY]
Length = 286
Score = 35.9 bits (82), Expect = 4.2, Method: Composition-based stats.
Identities = 18/81 (22%), Positives = 34/81 (41%), Gaps = 3/81 (3%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI 172
I+ +MD I E ++ L ++ A GI+ AVLG++ + V
Sbjct: 145 IEALMDSEIETHHAEAHAPVAALTRLAGALPAFGIVAAVLGVVNT---MGSVGQPPAVLG 201
Query: 173 PGIIESLISILLGLCVSIPSS 193
I +L+ LG+ ++ +
Sbjct: 202 GMIASALVGTFLGILLAYGAV 222
>gi|121596102|ref|YP_987998.1| MotA/TolQ/ExbB proton channel [Acidovorax sp. JS42]
gi|120608182|gb|ABM43922.1| MotA/TolQ/ExbB proton channel [Acidovorax sp. JS42]
Length = 286
Score = 35.9 bits (82), Expect = 4.2, Method: Composition-based stats.
Identities = 18/81 (22%), Positives = 34/81 (41%), Gaps = 3/81 (3%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI 172
I+ +MD I E ++ L ++ A GI+ AVLG++ + V
Sbjct: 145 IEALMDSEIETHHAEAHAPVAALTRLAGALPAFGIVAAVLGVVNT---MGSVGQPPAVLG 201
Query: 173 PGIIESLISILLGLCVSIPSS 193
I +L+ LG+ ++ +
Sbjct: 202 GMIASALVGTFLGILLAYGAV 222
>gi|90415362|ref|ZP_01223296.1| flagellar motor protein [marine gamma proteobacterium HTCC2207]
gi|90332685|gb|EAS47855.1| flagellar motor protein [marine gamma proteobacterium HTCC2207]
Length = 250
Score = 35.9 bits (82), Expect = 4.2, Method: Composition-based stats.
Identities = 8/77 (10%), Positives = 29/77 (37%), Gaps = 4/77 (5%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI 172
I +D + + + +G++G ++G++ ++ +
Sbjct: 118 IKSSLDRELISTKQRHARGAKIFSAWGEIAPAMGMIGTLIGLVQMLGNMG----DPKSIG 173
Query: 173 PGIIESLISILLGLCVS 189
P + +L++ + G ++
Sbjct: 174 PAMAVALLTTMYGAILA 190
>gi|56475793|ref|YP_157382.1| flagellar motor protein [Aromatoleum aromaticum EbN1]
gi|56311836|emb|CAI06481.1| chemotaxis motA protein [Aromatoleum aromaticum EbN1]
Length = 246
Score = 35.9 bits (82), Expect = 4.2, Method: Composition-based stats.
Identities = 13/79 (16%), Positives = 33/79 (41%), Gaps = 4/79 (5%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ +++V I ++ + +GILGAV+G++ +++ S+
Sbjct: 122 QHLRDVLEVEIDAWSAQMRLGAKIWEAAGGYAPTIGILGAVMGLIHVMENL----SDPSR 177
Query: 171 SIPGIIESLISILLGLCVS 189
GI + + + G+ +
Sbjct: 178 LGSGIAVAFAATIYGVAFA 196
>gi|15615802|ref|NP_244106.1| flagellar motor protein MotP [Bacillus halodurans C-125]
gi|10175863|dbj|BAB06959.1| flagellar motor apparatus [Bacillus halodurans C-125]
Length = 269
Score = 35.9 bits (82), Expect = 4.2, Method: Composition-based stats.
Identities = 26/175 (14%), Positives = 66/175 (37%), Gaps = 22/175 (12%)
Query: 24 VKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFW-SGQSLETVCKSL----KN 78
V +I + +++ +F L++ R + F L + ++
Sbjct: 41 VLIVIGGIVSALVIT--------FSFTELKQVPRVLMEAFRTQDHDLGKLVQTFVNLSGK 92
Query: 79 HHNIGLAAIFMSAMSEWKK---SCDKGARSPIGIQ-DRIDRMMDVAIARELEEITEKLSF 134
GL A+ + + E + + GI+ D I +M + E T+ +
Sbjct: 93 ARREGLLAL-EAGLDEEVEDPFIRKGILLAVDGIEPDVIKDIMMAEVTAMEERHTKSRAL 151
Query: 135 LGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVS 189
+ + G++G ++G++ Q++ ++ P + +L++ L G ++
Sbjct: 152 IDKAAEYAPAWGMIGTLIGLVLMLQNL----NDPSTLGPNMAVALLTTLYGTVLA 202
>gi|312134919|ref|YP_004002257.1| mota/tolq/exbb proton channel [Caldicellulosiruptor owensensis OL]
gi|311774970|gb|ADQ04457.1| MotA/TolQ/ExbB proton channel [Caldicellulosiruptor owensensis OL]
Length = 265
Score = 35.9 bits (82), Expect = 4.3, Method: Composition-based stats.
Identities = 18/128 (14%), Positives = 46/128 (35%), Gaps = 10/128 (7%)
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQ------DRIDRMMDVAI 121
V + L + ++ E + + +G+ + I ++D +
Sbjct: 73 DFANVVEQLVQLSDRARKEGLLALEQEIPNLQNPLLKKGLGLVVDGIEGEVIRDILDREV 132
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLIS 181
+E+ E + +GI+G V+G++ ++ +N P I + ++
Sbjct: 133 YLAEDELKEAAEVFEAAGGYSPTMGIIGTVMGLISVLSNL----TNPDELGPAIAVAFVA 188
Query: 182 ILLGLCVS 189
L G+ +
Sbjct: 189 TLYGVSSA 196
>gi|327481243|gb|AEA84553.1| flagellar motor protein [Pseudomonas stutzeri DSM 4166]
Length = 246
Score = 35.9 bits (82), Expect = 4.3, Method: Composition-based stats.
Identities = 14/79 (17%), Positives = 34/79 (43%), Gaps = 4/79 (5%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ I +++V + + SM +GI+GAV+G++ ++A +
Sbjct: 122 EVIRSILEVDLYTQESRDLRAAKVYESMGGYSPTIGIIGAVMGLIHVMGNLA----DPSQ 177
Query: 171 SIPGIIESLISILLGLCVS 189
GI + ++ + G+ +
Sbjct: 178 LGSGIAVAFVATIYGVAFA 196
>gi|313886572|ref|ZP_07820286.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Porphyromonas asaccharolytica PR426713P-I]
gi|312923982|gb|EFR34777.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Porphyromonas asaccharolytica PR426713P-I]
Length = 242
Score = 35.9 bits (82), Expect = 4.3, Method: Composition-based stats.
Identities = 11/76 (14%), Positives = 35/76 (46%), Gaps = 4/76 (5%)
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPG-IIESLISILLG 185
+ ++L + ++ G ++G++G ++ M ++ S ++ ++ + + + +LG
Sbjct: 145 RLDKRLIYPQVLTKFGPILGLMGTLIPMGPALVGLS---SGDMATMAYNMQVAFATTVLG 201
Query: 186 LCVSIPSSIAYNKFIE 201
L VS + +
Sbjct: 202 LFVSAIGYLTLQRLHR 217
>gi|70729062|ref|YP_258798.1| flagellar motor protein [Pseudomonas fluorescens Pf-5]
gi|68343361|gb|AAY90967.1| flagellar motor protein MotA [Pseudomonas fluorescens Pf-5]
Length = 246
Score = 35.9 bits (82), Expect = 4.3, Method: Composition-based stats.
Identities = 17/115 (14%), Positives = 43/115 (37%), Gaps = 5/115 (4%)
Query: 75 SLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSF 134
+ + +GL + + + + + I +++V + E
Sbjct: 87 TARKEGLLGLEGVADAEPDSYAR-KGLQLLVDGAEPEAIRSILEVDFYTQESRDIEAAKV 145
Query: 135 LGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVS 189
SM +GI+GAV+G++ ++A + GI + ++ + G+ +
Sbjct: 146 FESMGGYAPTIGIIGAVMGLIHVMGNLA----DPSQLGSGIAVAFVATIYGVASA 196
>gi|302872093|ref|YP_003840729.1| MotA/TolQ/ExbB proton channel [Caldicellulosiruptor obsidiansis
OB47]
gi|302574952|gb|ADL42743.1| MotA/TolQ/ExbB proton channel [Caldicellulosiruptor obsidiansis
OB47]
Length = 265
Score = 35.9 bits (82), Expect = 4.4, Method: Composition-based stats.
Identities = 18/128 (14%), Positives = 47/128 (36%), Gaps = 10/128 (7%)
Query: 68 SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQ------DRIDRMMDVAI 121
+V + L + ++ E + + +G+ + I ++D +
Sbjct: 73 DFASVVEQLVQLSDRARKEGLLALEQEIPNLQNPLLKKGLGLVVDGIEGEVIRDILDREV 132
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLIS 181
+E+ E + +GI+G V+G++ ++ +N P I + ++
Sbjct: 133 YLAEDELKEAAEVFEAAGGYSPTMGIIGTVMGLISVLSNL----TNPDELGPAIAVAFVA 188
Query: 182 ILLGLCVS 189
L G+ +
Sbjct: 189 TLYGVSSA 196
>gi|87120690|ref|ZP_01076583.1| flagellar motor protein [Marinomonas sp. MED121]
gi|86163918|gb|EAQ65190.1| flagellar motor protein [Marinomonas sp. MED121]
Length = 251
Score = 35.9 bits (82), Expect = 4.5, Method: Composition-based stats.
Identities = 19/129 (14%), Positives = 46/129 (35%), Gaps = 12/129 (9%)
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDR--IDRMMDVAIARELE 126
++ + GL ++ M KG + + D + M+ + E
Sbjct: 77 IDEIFNLADAARKGGLLSL--EGMDVSHPFMSKGIQMLVDGHDGSVVKSQMNKDMKMAFE 134
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGL 186
++ G +G++G ++G++ ++ + P + +L++ L G
Sbjct: 135 RHDAGAKVFKALGDTGPAMGMIGTLIGLVQMLANM----DDPKSIGPAMAVALLTTLYGA 190
Query: 187 ----CVSIP 191
V+IP
Sbjct: 191 MLANMVAIP 199
>gi|254510332|ref|ZP_05122399.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Rhodobacteraceae bacterium KLH11]
gi|221534043|gb|EEE37031.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Rhodobacteraceae bacterium KLH11]
Length = 475
Score = 35.9 bits (82), Expect = 4.5, Method: Composition-based stats.
Identities = 11/57 (19%), Positives = 21/57 (36%), Gaps = 9/57 (15%)
Query: 143 LLVGILGAVLGMMGFFQSI---------AGYYSNNVVSIPGIIESLISILLGLCVSI 190
++G LG V+GM+ + A S + + + +GL +I
Sbjct: 378 PMIGFLGTVIGMIAAMDLVGVVVSARPGAELNSAMGAITNELSVAFFTTFIGLIAAI 434
>gi|308048594|ref|YP_003912160.1| MotA/TolQ/ExbB proton channel [Ferrimonas balearica DSM 9799]
gi|307630784|gb|ADN75086.1| MotA/TolQ/ExbB proton channel [Ferrimonas balearica DSM 9799]
Length = 254
Score = 35.9 bits (82), Expect = 4.6, Method: Composition-based stats.
Identities = 20/185 (10%), Positives = 59/185 (31%), Gaps = 16/185 (8%)
Query: 13 IFALFMQMGLAV----KCIITLLFIFSILSWSVIIQKS---VNFITLRRQFREFEQLFWS 65
I A+ + + + ++ +L S V++ K F ++ + F
Sbjct: 17 IMAMVQGGDVMIFVNIESVLIVLAG----SLFVVMMKFNMKQFFGAVKIATKAFMFKLDK 72
Query: 66 GQSL-ETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARE 124
+ L + G A+ + ++ + + + I
Sbjct: 73 PEELIDQSVTMADAARKGGFLALEEAEVNNSFMKKAVDLLVDGHDAEVVRDALAKDIGLT 132
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILL 184
E + + +G++G ++G++ ++ + P + +L++ L
Sbjct: 133 AERHAAGIDIFRKLGEVAPAMGMIGTLIGLVAMLNNM----DDPKTIGPAMAVALLTTLY 188
Query: 185 GLCVS 189
G ++
Sbjct: 189 GAVIA 193
>gi|315644425|ref|ZP_07897558.1| MotA/TolQ/ExbB proton channel [Paenibacillus vortex V453]
gi|315280175|gb|EFU43468.1| MotA/TolQ/ExbB proton channel [Paenibacillus vortex V453]
Length = 266
Score = 35.9 bits (82), Expect = 4.7, Method: Composition-based stats.
Identities = 14/80 (17%), Positives = 27/80 (33%), Gaps = 4/80 (5%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
Q+ + ++ I E +G+LGAV+G++ +
Sbjct: 122 QEFVRDVLMEDINATEERHRSGALIFSQAGMYAPSLGVLGAVIGLIAALSHMEDMGE--- 178
Query: 170 VSIPGIIESLISILLGLCVS 189
I + I+ LLG+
Sbjct: 179 -LAHAIGAAFIATLLGIFTG 197
>gi|313905137|ref|ZP_07838506.1| MotA/TolQ/ExbB proton channel [Eubacterium cellulosolvens 6]
gi|313470040|gb|EFR65373.1| MotA/TolQ/ExbB proton channel [Eubacterium cellulosolvens 6]
Length = 266
Score = 35.9 bits (82), Expect = 4.7, Method: Composition-based stats.
Identities = 9/76 (11%), Positives = 30/76 (39%), Gaps = 1/76 (1%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
D++ +++ + + E S+ G++G ++G++ + +
Sbjct: 120 DKVRFVLERQLDDMMTRHEEAKGLYIKGSALAPAFGMIGTLVGLVNMLKGMDLSGGGGAS 179
Query: 171 SIP-GIIESLISILLG 185
++ + +LI+ G
Sbjct: 180 TLGQDMGVALITTFYG 195
>gi|302342670|ref|YP_003807199.1| MotA/TolQ/ExbB proton channel [Desulfarculus baarsii DSM 2075]
gi|301639283|gb|ADK84605.1| MotA/TolQ/ExbB proton channel [Desulfarculus baarsii DSM 2075]
Length = 261
Score = 35.9 bits (82), Expect = 4.7, Method: Composition-based stats.
Identities = 13/81 (16%), Positives = 30/81 (37%), Gaps = 4/81 (4%)
Query: 105 SPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGY 164
+ ++ I + + + I + M S G+LG ++G++ + G
Sbjct: 113 ADGAPEELIRQTLRIEIDALRARHMDAQDVFKKMGSYAPSFGMLGTLIGLVQ----MLGQ 168
Query: 165 YSNNVVSIPGIIESLISILLG 185
+ P + +LI+ G
Sbjct: 169 LDDPATIGPAMAVALITTFYG 189
>gi|121533428|ref|ZP_01665256.1| MotA/TolQ/ExbB proton channel [Thermosinus carboxydivorans Nor1]
gi|121307987|gb|EAX48901.1| MotA/TolQ/ExbB proton channel [Thermosinus carboxydivorans Nor1]
Length = 261
Score = 35.9 bits (82), Expect = 4.8, Method: Composition-based stats.
Identities = 14/97 (14%), Positives = 37/97 (38%), Gaps = 7/97 (7%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ I +++ I E ++ + +G+LGAV+G++ ++ +
Sbjct: 123 ELIRDVLEAEIELMQERHSKGALMFTQAGTYAPTLGVLGAVVGLIAALGNL----DDIEK 178
Query: 171 SIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFA 207
I + ++ L G+ + ++ F K +
Sbjct: 179 LGHSIAAAFVATLFGIFSG---YVMWHPFANKLKFLS 212
>gi|187736731|ref|YP_001840988.1| hypothetical protein pEspB_p34 [Exiguobacterium arabatum]
gi|183223764|emb|CAQ35249.1| hypothetical protein [Exiguobacterium arabatum]
Length = 764
Score = 35.9 bits (82), Expect = 4.8, Method: Composition-based stats.
Identities = 15/77 (19%), Positives = 31/77 (40%), Gaps = 1/77 (1%)
Query: 5 GLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFW 64
G AI +S +LF+++ L ++ L S+ V+ K R+ ++ F
Sbjct: 32 GAAIPTLSP-SLFLEVSLPSSTVLLGLIASSLFIGLVVFGKVWLNFRDLRKNQKGSARFT 90
Query: 65 SGQSLETVCKSLKNHHN 81
S L+ + + +
Sbjct: 91 SFDELKQQYRRVPDRKK 107
>gi|160896053|ref|YP_001561635.1| MotA/TolQ/ExbB proton channel [Delftia acidovorans SPH-1]
gi|160361637|gb|ABX33250.1| MotA/TolQ/ExbB proton channel [Delftia acidovorans SPH-1]
Length = 286
Score = 35.9 bits (82), Expect = 4.8, Method: Composition-based stats.
Identities = 18/77 (23%), Positives = 33/77 (42%), Gaps = 3/77 (3%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI 172
I+ +MD I E ++ L ++ A GI+ AVLG++ + V
Sbjct: 145 IESLMDSEIEAHHAEAHAPVNALTRLAGALPAFGIIAAVLGVVNT---MGSVGQPPSVLG 201
Query: 173 PGIIESLISILLGLCVS 189
I +L+ LG+ ++
Sbjct: 202 GMIASALVGTFLGILLA 218
>gi|196228185|ref|ZP_03127052.1| hypothetical protein CfE428DRAFT_0216 [Chthoniobacter flavus
Ellin428]
gi|196227588|gb|EDY22091.1| hypothetical protein CfE428DRAFT_0216 [Chthoniobacter flavus
Ellin428]
Length = 83
Score = 35.9 bits (82), Expect = 4.9, Method: Composition-based stats.
Identities = 10/49 (20%), Positives = 22/49 (44%), Gaps = 2/49 (4%)
Query: 180 ISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEGN 228
++ GL V+I S + +N ++ +++ A L+R+ G
Sbjct: 1 MATAFGLGVAIFSLLPFNYLNARLEEARHEIQDAAR--IRDLAREAPGE 47
>gi|171914836|ref|ZP_02930306.1| hypothetical protein VspiD_26705 [Verrucomicrobium spinosum DSM
4136]
Length = 92
Score = 35.9 bits (82), Expect = 4.9, Method: Composition-based stats.
Identities = 15/57 (26%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 132 LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLISILLGLC 187
++ G + AG L+G+LG+V+G+ F+ + G + I +S++S +G+
Sbjct: 2 MTIGGLLILAGPLLGMLGSVMGITQSFEVLGGNGVGDPEQLSAAIAKSMVSTAVGMV 58
>gi|220934516|ref|YP_002513415.1| MotA/TolQ/ExbB proton channel [Thioalkalivibrio sp. HL-EbGR7]
gi|219995826|gb|ACL72428.1| MotA/TolQ/ExbB proton channel [Thioalkalivibrio sp. HL-EbGR7]
Length = 246
Score = 35.5 bits (81), Expect = 5.0, Method: Composition-based stats.
Identities = 16/79 (20%), Positives = 36/79 (45%), Gaps = 4/79 (5%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ I +++V + + + SM +GI+GAV+G+M Q++A +
Sbjct: 122 EAIRNILEVDLNTREQFDLQGAKVYESMGVYAPTLGIIGAVMGLMAVMQNLA----DPSR 177
Query: 171 SIPGIIESLISILLGLCVS 189
GI + ++ + G+ +
Sbjct: 178 LGAGIAAAFVATIYGIASA 196
>gi|261403962|ref|YP_003240203.1| MotA/TolQ/ExbB proton channel [Paenibacillus sp. Y412MC10]
gi|329930229|ref|ZP_08283842.1| chemotaxis protein MotA [Paenibacillus sp. HGF5]
gi|261280425|gb|ACX62396.1| MotA/TolQ/ExbB proton channel [Paenibacillus sp. Y412MC10]
gi|328935251|gb|EGG31732.1| chemotaxis protein MotA [Paenibacillus sp. HGF5]
Length = 266
Score = 35.5 bits (81), Expect = 5.0, Method: Composition-based stats.
Identities = 14/80 (17%), Positives = 27/80 (33%), Gaps = 4/80 (5%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
Q+ + ++ I E +G+LGAV+G++ +
Sbjct: 122 QEFVRDVLMEDINATEERHRSGSLIFSQAGMYAPSLGVLGAVIGLIAALSHMEDMGE--- 178
Query: 170 VSIPGIIESLISILLGLCVS 189
I + I+ LLG+
Sbjct: 179 -LAHAIGAAFIATLLGIFTG 197
>gi|269962341|ref|ZP_06176691.1| flagellar motor protein [Vibrio harveyi 1DA3]
gi|269832837|gb|EEZ86946.1| flagellar motor protein [Vibrio harveyi 1DA3]
Length = 253
Score = 35.5 bits (81), Expect = 5.0, Method: Composition-based stats.
Identities = 12/75 (16%), Positives = 30/75 (40%), Gaps = 4/75 (5%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
D + + IA E T+ + +G++G ++G++ ++ +
Sbjct: 119 DVVRAALQKDIALTDERHTQGTGVFRAFGDVAPAMGMIGTLVGLVAMLSNM----DDPKA 174
Query: 171 SIPGIIESLISILLG 185
P + +L++ L G
Sbjct: 175 IGPAMAVALLTTLYG 189
>gi|226314900|ref|YP_002774796.1| chemotaxis protein [Brevibacillus brevis NBRC 100599]
gi|226097850|dbj|BAH46292.1| putative chemotaxis protein [Brevibacillus brevis NBRC 100599]
Length = 269
Score = 35.5 bits (81), Expect = 5.1, Method: Composition-based stats.
Identities = 15/107 (14%), Positives = 46/107 (42%), Gaps = 5/107 (4%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
++ + +++ + E + F +S +G++G +LGM G +S+ +
Sbjct: 119 EEELRLILENELKGEQYRYQQSAGFFRLISLLAPGMGLVGTLLGMTGVLKSL----EDMA 174
Query: 170 VSIPGIIESLISILLG-LCVSIPSSIAYNKFIEDSKKFAMQMEGFAN 215
++ + ++++ L G L ++ + Y + ++ + + F
Sbjct: 175 LTGHSLSAAVVATLYGALLANLFALPCYYRLMDLYDREMFEKRLFIE 221
>gi|330502788|ref|YP_004379657.1| flagellar motor protein [Pseudomonas mendocina NK-01]
gi|328917074|gb|AEB57905.1| flagellar motor protein [Pseudomonas mendocina NK-01]
Length = 246
Score = 35.5 bits (81), Expect = 5.1, Method: Composition-based stats.
Identities = 16/114 (14%), Positives = 45/114 (39%), Gaps = 5/114 (4%)
Query: 76 LKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFL 135
+ +GL ++ + + + + I +++V + + +
Sbjct: 88 ARKEGLLGLESVADAEPDPYAR-KGLQLLVDGAEPESIRSILEVDLYTQEARDIQAAKVF 146
Query: 136 GSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVS 189
SM +GI+GAV+G++ ++A + + GI + ++ + G+ +
Sbjct: 147 ESMGGYAPTIGIIGAVMGLIHVMGNLA----DPSMLGSGIAVAFVATIYGVGFA 196
>gi|310795443|gb|EFQ30904.1| cation transporter [Glomerella graminicola M1.001]
Length = 672
Score = 35.5 bits (81), Expect = 5.1, Method: Composition-based stats.
Identities = 26/147 (17%), Positives = 54/147 (36%), Gaps = 18/147 (12%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIF---SILS--WSVIIQKSVNFITLRR- 54
M GL +++S ++ Q ++ L I S+ W+V+ +K V +LR
Sbjct: 84 MTEAGLNTVNLSEMTVWQQ-------VMLWLLIIVGSSVWVSIWTVLARKHVFEKSLREV 136
Query: 55 -QFREFEQLFWSGQ--SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQD 111
Q + E+ G+ + + + + +S ++ D I +
Sbjct: 137 VQASDEERDRQHGRLPIFNGRDAASRGKGGASMTGVMERGVSSQARAGDNHIT--IDTPE 194
Query: 112 RIDRMMDVAIARELEEITEKLSFLGSM 138
+ R +++ + LSFL S
Sbjct: 195 NLTRRSTHSVSSSTKPTRPWLSFLSSA 221
>gi|260767265|ref|ZP_05876206.1| Flagellar motor rotation protein MotA [Vibrio furnissii CIP 102972]
gi|260617773|gb|EEX42951.1| Flagellar motor rotation protein MotA [Vibrio furnissii CIP 102972]
gi|315180896|gb|ADT87810.1| flagellar motor protein PomA [Vibrio furnissii NCTC 11218]
Length = 254
Score = 35.5 bits (81), Expect = 5.1, Method: Composition-based stats.
Identities = 10/75 (13%), Positives = 28/75 (37%), Gaps = 4/75 (5%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
D + + I+ E + +G++G ++G++ ++ +
Sbjct: 119 DVVRATLQKDISLTDERHEAGTGVFRAFGDVAPAMGMIGTLVGLVAMLSNM----DDPKA 174
Query: 171 SIPGIIESLISILLG 185
P + +L++ L G
Sbjct: 175 IGPAMAVALLTTLYG 189
>gi|153835782|ref|ZP_01988449.1| chemotaxis protein PomA [Vibrio harveyi HY01]
gi|148867500|gb|EDL66862.1| chemotaxis protein PomA [Vibrio harveyi HY01]
Length = 253
Score = 35.5 bits (81), Expect = 5.1, Method: Composition-based stats.
Identities = 12/75 (16%), Positives = 30/75 (40%), Gaps = 4/75 (5%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
D + + IA E T+ + +G++G ++G++ ++ +
Sbjct: 119 DVVRAALQKDIALTDERHTQGTGVFRAFGDVAPAMGMIGTLVGLVAMLSNM----DDPKA 174
Query: 171 SIPGIIESLISILLG 185
P + +L++ L G
Sbjct: 175 IGPAMAVALLTTLYG 189
>gi|134094540|ref|YP_001099615.1| chemotaxis motA protein [Herminiimonas arsenicoxydans]
Length = 226
Score = 35.5 bits (81), Expect = 5.1, Method: Composition-based stats.
Identities = 18/107 (16%), Positives = 44/107 (41%), Gaps = 8/107 (7%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI 172
+ ++D+ I + + + +GILGAVLG++ +++ S+
Sbjct: 104 LREVLDMEIGAYETQQRLSIKIWEAAGGYAPTIGILGAVLGLIHVMENL----SDPSRLG 159
Query: 173 PGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
GI + ++ + G+ + ++ + K + + F +E A
Sbjct: 160 SGIAVAFVATIYGVGFA---NLVFLPISSKLKAIVNR-DVFRHEMLA 202
>gi|2853602|gb|AAC08066.1| MotA [Pseudomonas putida]
Length = 246
Score = 35.5 bits (81), Expect = 5.2, Method: Composition-based stats.
Identities = 16/115 (13%), Positives = 43/115 (37%), Gaps = 5/115 (4%)
Query: 75 SLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSF 134
+ + +GL + + + + + I +++V + +
Sbjct: 87 TARKEGLLGLEGVADAEPDPYAR-KGLQLLVDGAEPEAIRSILEVDFLTQESRDIQAAKV 145
Query: 135 LGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVS 189
SM +GI+GAV+G++ ++A + GI + ++ + G+ +
Sbjct: 146 FESMGGYAPTIGIIGAVMGLIHVMGNLA----DPSQLGNGIAVAFVATIYGVASA 196
>gi|56551512|ref|YP_162351.1| MotA/TolQ/ExbB proton channel protein [Zymomonas mobilis subsp.
mobilis ZM4]
gi|241761155|ref|ZP_04759244.1| MotA/TolQ/ExbB proton channel [Zymomonas mobilis subsp. mobilis
ATCC 10988]
gi|56543086|gb|AAV89240.1| MotA/TolQ/ExbB proton channel [Zymomonas mobilis subsp. mobilis
ZM4]
gi|241374774|gb|EER64235.1| MotA/TolQ/ExbB proton channel [Zymomonas mobilis subsp. mobilis
ATCC 10988]
Length = 231
Score = 35.5 bits (81), Expect = 5.2, Method: Composition-based stats.
Identities = 17/86 (19%), Positives = 34/86 (39%), Gaps = 8/86 (9%)
Query: 104 RSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAG 163
R P + I ++ R I + V ++G V+G++ F ++
Sbjct: 100 RDPDDFRQWITGQLEKRKNRHQGAINFWY----IVGDVAPSVAMIGTVVGLVNMFSHLSD 155
Query: 164 YYSNNVVSIPGIIESLISILLGLCVS 189
S P + ++++ L GLC+S
Sbjct: 156 VNS----LGPSMAMAILTTLYGLCLS 177
>gi|168029716|ref|XP_001767371.1| inner dynein arm 1 heavy chain 1-ALPHa [Physcomitrella patens
subsp. patens]
gi|162681435|gb|EDQ67862.1| inner dynein arm 1 heavy chain 1-ALPHa [Physcomitrella patens
subsp. patens]
Length = 4573
Score = 35.5 bits (81), Expect = 5.3, Method: Composition-based stats.
Identities = 20/124 (16%), Positives = 42/124 (33%), Gaps = 5/124 (4%)
Query: 59 FEQLFWSGQ--SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRM 116
E FW + SL ++ + L + + A+ + S A+ + ++
Sbjct: 325 AELEFWQARNNSLSSMYEQLNSSRAKRVLALLEAGSSNSNLLGTFKAQVAELTKVFLEAK 384
Query: 117 MDVAIARELEEITEKL---SFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIP 173
+V I LE ++L + G + + ++ L V + + S
Sbjct: 385 DNVKILTTLERHFKRLRDGNLSGILETISPMINALRMVWVISRHYSEDVNMGSLFEHIAH 444
Query: 174 GIIE 177
I E
Sbjct: 445 QIAE 448
>gi|159489174|ref|XP_001702572.1| pyruvate phosphate dikinase [Chlamydomonas reinhardtii]
gi|158280594|gb|EDP06351.1| pyruvate phosphate dikinase [Chlamydomonas reinhardtii]
Length = 888
Score = 35.5 bits (81), Expect = 5.3, Method: Composition-based stats.
Identities = 25/151 (16%), Positives = 52/151 (34%), Gaps = 22/151 (14%)
Query: 48 NFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMS--AMSEWKKSCDKGARS 105
+RR E+ S LE + ++LK IF + + + D
Sbjct: 575 RIAAMRRMI--AEEELASSHKLEAL-EALKAFQREDFEGIFKAMDGLPVTIRLLDPPLHE 631
Query: 106 ----PIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGF---- 157
+ R + + +E + +L+ L + ++G+ G LG++
Sbjct: 632 FLPQEGPAMAALCRQLAGELGASVERVEARLNGLREV---NPMMGLRGCRLGIVHPEITD 688
Query: 158 FQSIAGYYSNNVVSIPG------IIESLISI 182
Q+ A + V+ G I+ L++
Sbjct: 689 MQATAILEAATRVAAAGGHVHPHIMVPLVAT 719
>gi|34498444|ref|NP_902659.1| flagellar motor protein MotA [Chromobacterium violaceum ATCC 12472]
gi|34104299|gb|AAQ60658.1| chemotaxis lafT protein [Chromobacterium violaceum ATCC 12472]
Length = 288
Score = 35.5 bits (81), Expect = 5.3, Method: Composition-based stats.
Identities = 14/75 (18%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI 172
++ ++D + E++ + L ++ A GIL AVLG++ ++A S ++
Sbjct: 142 LEGVLDQELDAIHEQLMQPSKSLHKIAEAMPGFGILAAVLGIVMAMNTVAQGASAGEIAA 201
Query: 173 PGIIESLISILLGLC 187
+ +++ +G+
Sbjct: 202 S-VAAAMVGTFIGIF 215
>gi|91225059|ref|ZP_01260281.1| flagellar motor protein [Vibrio alginolyticus 12G01]
gi|254228603|ref|ZP_04922027.1| chemotaxis protein PomA [Vibrio sp. Ex25]
gi|262395024|ref|YP_003286878.1| Flagellar motor rotation protein MotA [Vibrio sp. Ex25]
gi|269965068|ref|ZP_06179233.1| flagellar motor protein [Vibrio alginolyticus 40B]
gi|3024412|sp|O06873|POMA_VIBAL RecName: Full=Chemotaxis protein PomA
gi|2130948|dbj|BAA20284.1| PomA [Vibrio alginolyticus]
gi|91190002|gb|EAS76273.1| flagellar motor protein [Vibrio alginolyticus 12G01]
gi|151938782|gb|EDN57616.1| chemotaxis protein PomA [Vibrio sp. Ex25]
gi|262338618|gb|ACY52413.1| Flagellar motor rotation protein MotA [Vibrio sp. Ex25]
gi|269830371|gb|EEZ84596.1| flagellar motor protein [Vibrio alginolyticus 40B]
Length = 253
Score = 35.5 bits (81), Expect = 5.4, Method: Composition-based stats.
Identities = 12/75 (16%), Positives = 30/75 (40%), Gaps = 4/75 (5%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
D + + IA E T+ + +G++G ++G++ ++ +
Sbjct: 119 DVVRAALKKDIALTDERHTQGTGVFRAFGDVAPAMGMIGTLVGLVAMLSNM----DDPKA 174
Query: 171 SIPGIIESLISILLG 185
P + +L++ L G
Sbjct: 175 IGPAMAVALLTTLYG 189
>gi|270296977|ref|ZP_06203176.1| integral membrane protein [Bacteroides sp. D20]
gi|317479014|ref|ZP_07938158.1| integral membrane protein [Bacteroides sp. 4_1_36]
gi|270272964|gb|EFA18827.1| integral membrane protein [Bacteroides sp. D20]
gi|316904822|gb|EFV26632.1| integral membrane protein [Bacteroides sp. 4_1_36]
Length = 201
Score = 35.5 bits (81), Expect = 5.4, Method: Composition-based stats.
Identities = 13/89 (14%), Positives = 33/89 (37%), Gaps = 6/89 (6%)
Query: 137 SMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAY 196
+ G ++G++G ++ M +A + + + + ++GL ++ I
Sbjct: 115 TFIKLGPMLGLMGTLIPMGPALVGLA--QGDISSMAYNMQVAFATTVVGLVIAAVGVITL 172
Query: 197 NKFIEDSKKFAMQMEGFANEFSAILSRQT 225
+ +E ++SRQT
Sbjct: 173 QVKQRWYAREMNDLEY----LYKVISRQT 197
>gi|260752882|ref|YP_003225775.1| MotA/TolQ/ExbB proton channel [Zymomonas mobilis subsp. mobilis
NCIMB 11163]
gi|258552245|gb|ACV75191.1| MotA/TolQ/ExbB proton channel [Zymomonas mobilis subsp. mobilis
NCIMB 11163]
Length = 231
Score = 35.5 bits (81), Expect = 5.4, Method: Composition-based stats.
Identities = 17/86 (19%), Positives = 34/86 (39%), Gaps = 8/86 (9%)
Query: 104 RSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAG 163
R P + I ++ R I + V ++G V+G++ F ++
Sbjct: 100 RDPDDFRQWITGQLEKRKNRHQGAINFWY----IVGDVAPSVAMIGTVVGLVNMFSHLSD 155
Query: 164 YYSNNVVSIPGIIESLISILLGLCVS 189
S P + ++++ L GLC+S
Sbjct: 156 VNS----LGPSMAMAILTTLYGLCLS 177
>gi|237799261|ref|ZP_04587722.1| flagellar motor protein [Pseudomonas syringae pv. oryzae str. 1_6]
gi|237806230|ref|ZP_04592934.1| flagellar motor protein [Pseudomonas syringae pv. oryzae str. 1_6]
gi|331022117|gb|EGI02174.1| flagellar motor protein [Pseudomonas syringae pv. oryzae str. 1_6]
gi|331027344|gb|EGI07399.1| flagellar motor protein [Pseudomonas syringae pv. oryzae str. 1_6]
Length = 246
Score = 35.5 bits (81), Expect = 5.4, Method: Composition-based stats.
Identities = 13/56 (23%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
Query: 134 FLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVS 189
SM VGI+GAV+G++ ++A + GI + ++ + G+ ++
Sbjct: 145 VFESMGGYAPTVGIIGAVMGLIHVMGNLA----DPSQLGSGIAVAFVATIYGVAIA 196
>gi|317129963|ref|YP_004096245.1| MotA/TolQ/ExbB proton channel [Bacillus cellulosilyticus DSM 2522]
gi|315474911|gb|ADU31514.1| MotA/TolQ/ExbB proton channel [Bacillus cellulosilyticus DSM 2522]
Length = 270
Score = 35.5 bits (81), Expect = 5.4, Method: Composition-based stats.
Identities = 12/79 (15%), Positives = 33/79 (41%), Gaps = 4/79 (5%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ I +M + E + S + G++G ++G++ Q++ ++
Sbjct: 128 EIIKDIMMAEVVAMEERHRKGRSIIEKAGEYAPAWGMIGTLIGLVLMLQNL----NDPSS 183
Query: 171 SIPGIIESLISILLGLCVS 189
P + +L++ L G ++
Sbjct: 184 LGPNMAVALLTTLYGSLLA 202
>gi|255074085|ref|XP_002500717.1| ATP-binding cassette superfamily [Micromonas sp. RCC299]
gi|226515980|gb|ACO61975.1| ATP-binding cassette superfamily [Micromonas sp. RCC299]
Length = 2041
Score = 35.5 bits (81), Expect = 5.4, Method: Composition-based stats.
Identities = 11/90 (12%), Positives = 28/90 (31%), Gaps = 5/90 (5%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLA 85
++ +L S S + + K + F+ +R + + SL+ +
Sbjct: 1556 GVLIILVELSEGSIATLASKGLEFLRIRSRNTSADN-----SSLDEADDEDVAEERRRVN 1610
Query: 86 AIFMSAMSEWKKSCDKGARSPIGIQDRIDR 115
+ S ++ + I I +
Sbjct: 1611 DAAAAGFSADRRGENSADTRDGVILHGITK 1640
>gi|126664985|ref|ZP_01735968.1| flagellar motor protein MotC [Marinobacter sp. ELB17]
gi|126630355|gb|EBA00970.1| flagellar motor protein MotC [Marinobacter sp. ELB17]
Length = 247
Score = 35.5 bits (81), Expect = 5.4, Method: Composition-based stats.
Identities = 24/128 (18%), Positives = 51/128 (39%), Gaps = 10/128 (7%)
Query: 68 SLETVCKSLKN----HHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDR--IDRMMDVAI 121
SLE + N GL + A SE ++ KG + + I +M+V +
Sbjct: 73 SLEDGLDKVVNWSVIARKKGLLGLEGLAESEPERFVQKGLLLLVDGAESNTIRSIMEVEL 132
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLIS 181
+ + +M +GI+GAV+G++ ++ + GI + ++
Sbjct: 133 ETREQRDLDSARVFEAMGGYSPTIGIIGAVMGLIQVMTNL----EDPESLGSGIATAFVA 188
Query: 182 ILLGLCVS 189
+ G+ ++
Sbjct: 189 TIYGVALA 196
>gi|330940675|gb|EGH43693.1| flagellar motor protein [Pseudomonas syringae pv. pisi str. 1704B]
Length = 194
Score = 35.5 bits (81), Expect = 5.5, Method: Composition-based stats.
Identities = 13/56 (23%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
Query: 134 FLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVS 189
SM VGI+GAV+G++ ++A + GI + ++ + G+ ++
Sbjct: 93 VFESMGGYAPTVGIIGAVMGLIHVMGNLA----DPSQLGSGIAVAFVATIYGVAMA 144
>gi|315928503|gb|EFV07808.1| flagellar motor protein MotA [Campylobacter jejuni subsp. jejuni
305]
Length = 200
Score = 35.5 bits (81), Expect = 5.5, Method: Composition-based stats.
Identities = 13/79 (16%), Positives = 30/79 (37%), Gaps = 4/79 (5%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ I M++ + E E + +G++GAV G++ + + N
Sbjct: 122 EEIHESMEIQTEQLEEHYKECAEYWIVFGETCPTMGLVGAVFGLILALKLL----DNPQA 177
Query: 171 SIPGIIESLISILLGLCVS 189
GI + + + G+ +
Sbjct: 178 MAAGISGAFTATVTGIFGA 196
>gi|212544732|ref|XP_002152520.1| conserved hypothetical protein [Penicillium marneffei ATCC 18224]
gi|210065489|gb|EEA19583.1| conserved hypothetical protein [Penicillium marneffei ATCC 18224]
Length = 692
Score = 35.5 bits (81), Expect = 5.5, Method: Composition-based stats.
Identities = 19/145 (13%), Positives = 46/145 (31%), Gaps = 24/145 (16%)
Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
M GL +++S +F Q +L SI+ ++ + ++ + R + F
Sbjct: 61 MTETGLNTINLSTLNMFQQ---------VILCFLSIVGSTIWVSIAIVLVRRRAFEKRFS 111
Query: 61 QLFWSGQSLETVCKSLKNHHN--IGLAAIFMS---AMSEWKKSCDKGARSPIGIQDRIDR 115
+ + SL + + F S + ++ + P +Q
Sbjct: 112 DIVEEQRRPRNRKDSLSSRRPNSASIYRPFASHNLGLLRFRSFRTEPKGQPNTMQP---- 167
Query: 116 MMDVAIARELEEITEKLSFLGSMSS 140
+ + L+ L + +
Sbjct: 168 ------DHDNRDPERNLATLAPLGA 186
>gi|288940202|ref|YP_003442442.1| MotA/TolQ/ExbB proton channel [Allochromatium vinosum DSM 180]
gi|288895574|gb|ADC61410.1| MotA/TolQ/ExbB proton channel [Allochromatium vinosum DSM 180]
Length = 262
Score = 35.5 bits (81), Expect = 5.6, Method: Composition-based stats.
Identities = 20/149 (13%), Positives = 47/149 (31%), Gaps = 16/149 (10%)
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEI 128
L+ L + + +A+ W + + D + + ++
Sbjct: 109 LQDWIDFLSGREHADAERV-PAALRRWHDRTRAH-EDSVHLSDYV-------LLVRGQQH 159
Query: 129 TEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIE-------SLIS 181
+ +G ++G +G VLG+ +A + V G+ + +
Sbjct: 160 QHNFAPIGFAIWVLPMLGFIGTVLGITQAIGGLADSVAVTAVDGGGLGGVLGGLQFAFDT 219
Query: 182 ILLGLCVSIPSSIAYNKFIEDSKKFAMQM 210
+GL + IP +A ++ M
Sbjct: 220 TFVGLVLVIPLMLALLVLRARAQTLDMLY 248
>gi|15606306|ref|NP_213685.1| flagellar motor protein MotA [Aquifex aeolicus VF5]
gi|6225709|sp|O67122|MOTA_AQUAE RecName: Full=Motility protein A; AltName: Full=Chemotaxis protein
MotA
gi|2983506|gb|AAC07083.1| flagellar motor protein MotA [Aquifex aeolicus VF5]
Length = 254
Score = 35.5 bits (81), Expect = 5.6, Method: Composition-based stats.
Identities = 13/77 (16%), Positives = 41/77 (53%), Gaps = 4/77 (5%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI 172
I ++A+A+ E+++ +++ ++ G++G ++G++ +++ ++
Sbjct: 125 IKATAEMALAQLDEKMSTEVAVWEKLADLFPAFGMIGTLIGLIQMLRNL----NDPSALG 180
Query: 173 PGIIESLISILLGLCVS 189
PG+ +LI+ L G ++
Sbjct: 181 PGMAVALITTLYGAILA 197
>gi|150016470|ref|YP_001308724.1| MotA/TolQ/ExbB proton channel [Clostridium beijerinckii NCIMB 8052]
gi|149902935|gb|ABR33768.1| MotA/TolQ/ExbB proton channel [Clostridium beijerinckii NCIMB 8052]
Length = 257
Score = 35.5 bits (81), Expect = 5.7, Method: Composition-based stats.
Identities = 9/77 (11%), Positives = 28/77 (36%), Gaps = 4/77 (5%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI 172
+ +++ + + + S +GI+G + ++ ++ S+
Sbjct: 125 VKSILNTKLEQLSTRHENCIEMFTSAGGYAPTMGIVGTITSLVIILSAL----SDVAAMG 180
Query: 173 PGIIESLISILLGLCVS 189
I + ++ L GL +
Sbjct: 181 EKIAVAFVATLYGLATA 197
>gi|220935191|ref|YP_002514090.1| MotA/TolQ/ExbB proton channel [Thioalkalivibrio sp. HL-EbGR7]
gi|219996501|gb|ACL73103.1| MotA/TolQ/ExbB proton channel [Thioalkalivibrio sp. HL-EbGR7]
Length = 277
Score = 35.5 bits (81), Expect = 5.7, Method: Composition-based stats.
Identities = 13/80 (16%), Positives = 34/80 (42%), Gaps = 2/80 (2%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
+ I ++ +AR + +M++ G+LG ++G++ A ++
Sbjct: 121 MEDISDLLQWRLARLRAREHAEAQVFRTMATYAPAFGMLGTLIGLINML--FATQTNDFA 178
Query: 170 VSIPGIIESLISILLGLCVS 189
V + +LI+ G+ ++
Sbjct: 179 VIAVNLGVALITTFYGIVLA 198
>gi|28897463|ref|NP_797068.1| flagellar motor protein PomA [Vibrio parahaemolyticus RIMD 2210633]
gi|260364263|ref|ZP_05776962.1| chemotaxis protein PomA [Vibrio parahaemolyticus K5030]
gi|260876423|ref|ZP_05888778.1| chemotaxis protein PomA [Vibrio parahaemolyticus AN-5034]
gi|260898694|ref|ZP_05907190.1| chemotaxis protein PomA [Vibrio parahaemolyticus Peru-466]
gi|260902771|ref|ZP_05911166.1| chemotaxis protein PomA [Vibrio parahaemolyticus AQ4037]
gi|4322000|gb|AAD15904.1| sodium-driven polar flagellar protein [Vibrio parahaemolyticus]
gi|28805675|dbj|BAC58952.1| sodium-driven polar flagellar protein MotA [Vibrio parahaemolyticus
RIMD 2210633]
gi|308086852|gb|EFO36547.1| chemotaxis protein PomA [Vibrio parahaemolyticus Peru-466]
gi|308092978|gb|EFO42673.1| chemotaxis protein PomA [Vibrio parahaemolyticus AN-5034]
gi|308106856|gb|EFO44396.1| chemotaxis protein PomA [Vibrio parahaemolyticus AQ4037]
gi|308113752|gb|EFO51292.1| chemotaxis protein PomA [Vibrio parahaemolyticus K5030]
gi|328472527|gb|EGF43390.1| flagellar motor protein PomA [Vibrio parahaemolyticus 10329]
Length = 253
Score = 35.5 bits (81), Expect = 5.7, Method: Composition-based stats.
Identities = 12/75 (16%), Positives = 30/75 (40%), Gaps = 4/75 (5%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
D + + IA E T+ + +G++G ++G++ ++ +
Sbjct: 119 DVVRAALQKDIALTDERHTQGTGVFRAFGDVAPAMGMIGTLVGLVAMLSNM----DDPKA 174
Query: 171 SIPGIIESLISILLG 185
P + +L++ L G
Sbjct: 175 IGPAMAVALLTTLYG 189
>gi|330961245|gb|EGH61505.1| flagellar motor protein [Pseudomonas syringae pv. maculicola str.
ES4326]
Length = 246
Score = 35.5 bits (81), Expect = 5.8, Method: Composition-based stats.
Identities = 13/56 (23%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
Query: 134 FLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVS 189
SM VGI+GAV+G++ ++A + GI + ++ + G+ ++
Sbjct: 145 VFESMGGYAPTVGIIGAVMGLIHVMGNLA----DPSQLGSGIAVAFVATIYGVAIA 196
>gi|304314813|ref|YP_003849960.1| transporter protein [Methanothermobacter marburgensis str. Marburg]
gi|302588272|gb|ADL58647.1| predicted transporter protein [Methanothermobacter marburgensis
str. Marburg]
Length = 226
Score = 35.5 bits (81), Expect = 5.8, Method: Composition-based stats.
Identities = 23/198 (11%), Positives = 75/198 (37%), Gaps = 14/198 (7%)
Query: 27 IITLLFIFSILSWSVIIQKSV---NFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIG 83
+I L +F + ++I + +R RE E S + T + ++ +++
Sbjct: 25 VIAGLLLFMVY--AIITLGGLMSEYSGRIRTDIRELESAIKSISNPGTPERIIEVVNSME 82
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGL 143
+ ++ ++ + G +S + ++++ + + + + ++ G
Sbjct: 83 IPQSQKEVLTNIAETSELGPKSREAL---ARKLIENEELKAAKSLEK----TDIVTRLGP 135
Query: 144 LVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDS 203
+G++G ++ M ++ N + II + + ++GL + +
Sbjct: 136 TLGLMGTLIPMGPGLAALGAGDINTLAQA--IIIAFDTTVVGLASGGIAYVISKVRRRWY 193
Query: 204 KKFAMQMEGFANEFSAIL 221
+++ +E A ++
Sbjct: 194 EEYLSNLETMAEAVLEVM 211
>gi|110803897|ref|YP_697564.1| hypothetical protein CPR_0230 [Clostridium perfringens SM101]
gi|110684398|gb|ABG87768.1| hypothetical protein CPR_0230 [Clostridium perfringens SM101]
Length = 476
Score = 35.5 bits (81), Expect = 5.8, Method: Composition-based stats.
Identities = 32/223 (14%), Positives = 80/223 (35%), Gaps = 28/223 (12%)
Query: 11 ISIFALFMQMGLAVKCII----TLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG 66
+S + ++ + I+ L + VI + + +++++ F
Sbjct: 1 MSTISSILK-SFLTQNILGYIGITLIL------IVICLGFIYNMRVKKKYENLLNAFNES 53
Query: 67 QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
+ + V + + L + + ++++S KG + + ++ I +++
Sbjct: 54 EWIN-VSNNEEKKELKFLNSELKAMTDDFRRSAIKGTYNI-----NTEVIIQKNIEKKIL 107
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGL 186
+ + L S+ S +G++G LG+ + G S+ S+ S+ L +
Sbjct: 108 KEENIANILPSI-SIA--LGLIGTFLGLTVAIMTTTGILSSGTQSMADFSRSMNMPLGSM 164
Query: 187 -------CVSIPSSIAYNKFIEDSKKFAMQ-MEGFANEFSAIL 221
V + SI N + K+ + F + IL
Sbjct: 165 SSAFWTSIVGVIGSIILNYLNINLKRAKEDFYDVFEDYLDNIL 207
>gi|325271955|ref|ZP_08138406.1| flagellar motor protein [Pseudomonas sp. TJI-51]
gi|324102903|gb|EGC00299.1| flagellar motor protein [Pseudomonas sp. TJI-51]
Length = 246
Score = 35.5 bits (81), Expect = 5.9, Method: Composition-based stats.
Identities = 14/79 (17%), Positives = 34/79 (43%), Gaps = 4/79 (5%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ I +++V + + SM +GI+GAV+G++ ++A +
Sbjct: 122 EAIRSILEVDFLTQESRDIQAAKVFESMGGYAPTIGIIGAVMGLIHVMGNLA----DPSQ 177
Query: 171 SIPGIIESLISILLGLCVS 189
GI + ++ + G+ +
Sbjct: 178 LGNGIAVAFVATIYGVASA 196
>gi|304559915|gb|ADM42579.1| DNA-binding protein [Edwardsiella tarda FL6-60]
Length = 1279
Score = 35.5 bits (81), Expect = 5.9, Method: Composition-based stats.
Identities = 13/62 (20%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Query: 34 FSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMS 93
S+LSW++ + + ++RQ ++ Q G SL + + + I ++M
Sbjct: 1 MSVLSWAIGLCRKTEAWLVKRQAKDQLQRAELGLSLTEG-ELDDRYDTLAPKTINDASMR 59
Query: 94 EW 95
E+
Sbjct: 60 EY 61
>gi|330808240|ref|YP_004352702.1| flagellar motor protein [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327376348|gb|AEA67698.1| flagellar motor protein [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
Length = 246
Score = 35.5 bits (81), Expect = 5.9, Method: Composition-based stats.
Identities = 17/115 (14%), Positives = 43/115 (37%), Gaps = 5/115 (4%)
Query: 75 SLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSF 134
+ + +GL + + + + + I +++V + E
Sbjct: 87 TARKEGLLGLEGVADAEPDSYSR-KGLQLLVDGAEPEAIRSILEVDFYTQESRDIEAAKV 145
Query: 135 LGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVS 189
SM +GI+GAV+G++ ++A + GI + ++ + G+ +
Sbjct: 146 FESMGGYAPTIGIIGAVMGLIHVMGNLA----DPSQLGSGIAVAFVATIYGVASA 196
>gi|310816841|ref|YP_003964805.1| flagellar motor protein MotA [Ketogulonicigenium vulgare Y25]
gi|308755576|gb|ADO43505.1| flagellar motor protein MotA [Ketogulonicigenium vulgare Y25]
Length = 288
Score = 35.5 bits (81), Expect = 5.9, Method: Composition-based stats.
Identities = 23/146 (15%), Positives = 55/146 (37%), Gaps = 14/146 (9%)
Query: 46 SVNFITLRRQFREFEQLFWSGQSLET--VCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGA 103
I L R + + +E + I +S + + ++
Sbjct: 84 LFELIRLARANPVALE-----EHIEQPRASSIFAQYPRILADHEAVSLICDTLRAAGMNY 138
Query: 104 RSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAG 163
P+ +++ +++ ++ + L+ + L +M+ +GI+ AVLG++ SI
Sbjct: 139 DDPMQVEEVLEKRLEASRHHALQPVHA----LQTMADGLPALGIVAAVLGVIKTMSSI-- 192
Query: 164 YYSNNVVSIPGIIESLISILLGLCVS 189
V I +L+ LG+ ++
Sbjct: 193 -DEPPAVLGKMIGGALVGTFLGVFLA 217
>gi|77457795|ref|YP_347300.1| flagellar motor protein [Pseudomonas fluorescens Pf0-1]
gi|77381798|gb|ABA73311.1| putative chemotaxis protein [Pseudomonas fluorescens Pf0-1]
Length = 246
Score = 35.5 bits (81), Expect = 5.9, Method: Composition-based stats.
Identities = 17/115 (14%), Positives = 43/115 (37%), Gaps = 5/115 (4%)
Query: 75 SLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSF 134
+ + +GL + + + + + I +++V + E
Sbjct: 87 TARKEGLLGLEGVADAEPDAYSR-KGLQLLVDGAEPEAIRSILEVDFYTQEARDVEAAKV 145
Query: 135 LGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVS 189
SM +GI+GAV+G++ ++A + GI + ++ + G+ +
Sbjct: 146 FESMGGYAPTIGIIGAVMGLIHVMGNLA----DPSQLGNGIAVAFVATIYGVASA 196
>gi|86608561|ref|YP_477323.1| circadian phase modifier CpmA-like protein [Synechococcus sp.
JA-2-3B'a(2-13)]
gi|86557103|gb|ABD02060.1| circadian phase modifier CpmA-like protein [Synechococcus sp.
JA-2-3B'a(2-13)]
Length = 277
Score = 35.5 bits (81), Expect = 6.0, Method: Composition-based stats.
Identities = 28/156 (17%), Positives = 61/156 (39%), Gaps = 18/156 (11%)
Query: 59 FEQLFWS-GQSLETVCKSLKNHHNIGL----AAIFMSAMSEWKKSCDKGARSPIGIQDRI 113
F + W G++ + + + L+ H G I +E + + S + I
Sbjct: 54 FPEAVWGPGKTPDQIAQILEQLHQRGSLALATRIEAQVYAEIRSRLPQAQYSELARLCWI 113
Query: 114 DRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILG---------AVLGMMGFFQSIAGY 164
V+ ++ I+ + L A L + + G V G+ + A
Sbjct: 114 PPRQVVSHPGQVSVISAGTADLPVAEEAALTLELSGFQVKRLWDVGVAGIHRLLHNWAAL 173
Query: 165 YSNNVVSIPGIIESLISILLGLC----VSIPSSIAY 196
++ ++ + G+ +L S++ GL +++P+SI Y
Sbjct: 174 QADVLIVVAGMEGALASVVAGLADCPVIAVPTSIGY 209
>gi|321444484|gb|EFX60417.1| hypothetical protein DAPPUDRAFT_343877 [Daphnia pulex]
Length = 70
Score = 35.5 bits (81), Expect = 6.1, Method: Composition-based stats.
Identities = 11/37 (29%), Positives = 16/37 (43%), Gaps = 7/37 (18%)
Query: 2 NNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILS 38
N YGL A+ + K ++ LL I S+ S
Sbjct: 41 NPYGLQ-------AMIAHGDMVSKGVLALLLIMSMGS 70
>gi|254444552|ref|ZP_05058028.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Verrucomicrobiae bacterium DG1235]
gi|198258860|gb|EDY83168.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Verrucomicrobiae bacterium DG1235]
Length = 282
Score = 35.5 bits (81), Expect = 6.1, Method: Composition-based stats.
Identities = 29/202 (14%), Positives = 72/202 (35%), Gaps = 25/202 (12%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRR----------QFREF--EQLFWSGQSLETVCKS 75
+ L + + + +I K++ + R + E+ + L++
Sbjct: 72 MVCLMLM-LWALIIIAYKTIRVVGERSIVSYPFLGISKGERIIPEEALSHYKDLKSDVNR 130
Query: 76 LKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFL 135
+ + L I ++A+ + S + + + +R + +++ L L
Sbjct: 131 SASLKDKILPDIILAALHRFD-STHSIQDASLAVHERSEMA--------YDQLDSDLGLL 181
Query: 136 GSMSSAGLLVGILGAVLGMMG--FFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSS 193
++ A VG +G V G+ A + V+ + + S L+ L +SI
Sbjct: 182 RYIAWAIPSVGFIGTVRGIGEALALADEAIRGDISGVTAA-LGLAFNSTLIALLLSIALM 240
Query: 194 IAYNKFIEDSKKFAMQMEGFAN 215
+ +K + ++ FA+
Sbjct: 241 FFLHLLQSKQEKLLIDLKDFAS 262
>gi|117620588|ref|YP_857807.1| chemotaxis protein PomA [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
gi|117561995|gb|ABK38943.1| chemotaxis protein PomA [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
Length = 252
Score = 35.5 bits (81), Expect = 6.2, Method: Composition-based stats.
Identities = 34/208 (16%), Positives = 73/208 (35%), Gaps = 34/208 (16%)
Query: 9 MDI-SIFALFMQMGLAVKCIITLLFI--FSIL----SWSVIIQKSVNFITLRRQFREFEQ 61
MD+ S+ + + G+ V +L S+ S + I S+ ++ +F
Sbjct: 1 MDLGSLIGIVLGFGVVVYG---MLLGGPMSMYVDMPSVYITILGSLFICMMKFNLGQFLM 57
Query: 62 LFW--------SGQSLETVCKSLKNHHNIGLAAIFMSAMSE------WKKSCDKGARSPI 107
F G L+ + + F++ + KK D
Sbjct: 58 AFKVAGKAFMYKGDKLDDLIAKAVELADAARKGGFLALEAAEIPNTFMKKGIDMLVDGHD 117
Query: 108 GIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSN 167
D + +M+ I E + S+ G +G++G ++G++ ++ S+
Sbjct: 118 A--DVVRAVMEKDIELTSERHVIAVKVFRSLGDLGPAMGMIGTLVGLVAMLANM----SD 171
Query: 168 NVVSIPGIIESLISILLGLC----VSIP 191
P + +L++ L G ++IP
Sbjct: 172 PKSIGPAMAVALLTTLYGAIEANMIAIP 199
>gi|114777570|ref|ZP_01452551.1| hypothetical protein SPV1_07681 [Mariprofundus ferrooxydans PV-1]
gi|114552041|gb|EAU54558.1| hypothetical protein SPV1_07681 [Mariprofundus ferrooxydans PV-1]
Length = 252
Score = 35.5 bits (81), Expect = 6.2, Method: Composition-based stats.
Identities = 11/77 (14%), Positives = 34/77 (44%), Gaps = 4/77 (5%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI 172
I+ ++ + + E S+ + +G++G ++G++ Q++ S+
Sbjct: 121 IEDILYKEMDKVAERHALGADMFTSLGTYAPSMGMIGTLVGLVLMLQNM----SDPSSIG 176
Query: 173 PGIIESLISILLGLCVS 189
P + +L++ G ++
Sbjct: 177 PSMSIALLTTFYGALMA 193
>gi|259417201|ref|ZP_05741120.1| chemotaxis protein MotA [Silicibacter sp. TrichCH4B]
gi|259346107|gb|EEW57921.1| chemotaxis protein MotA [Silicibacter sp. TrichCH4B]
Length = 289
Score = 35.5 bits (81), Expect = 6.3, Method: Composition-based stats.
Identities = 19/93 (20%), Positives = 39/93 (41%), Gaps = 7/93 (7%)
Query: 97 KSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMG 156
+S P +++ +++ ++ + L L +M+ +GI+ AVLG++
Sbjct: 132 RSASMNYDDPHQVEEVLEKRIEANLHHALHSSHA----LQTMADGLPALGIVAAVLGVIK 187
Query: 157 FFQSIAGYYSNNVVSIPGIIESLISILLGLCVS 189
SI V I +L+ LG+ +S
Sbjct: 188 TMASI---DQPPEVLGKMIGGALVGTFLGVFLS 217
>gi|223040123|ref|ZP_03610403.1| chemotaxis protein PomA [Campylobacter rectus RM3267]
gi|222878600|gb|EEF13701.1| chemotaxis protein PomA [Campylobacter rectus RM3267]
Length = 236
Score = 35.5 bits (81), Expect = 6.3, Method: Composition-based stats.
Identities = 18/114 (15%), Positives = 45/114 (39%), Gaps = 6/114 (5%)
Query: 78 NHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQ--DRIDRMMDVAIARELEEITEKLSFL 135
G+ A+ A +E KG + D I ++++ + + + +
Sbjct: 67 KARRDGILALENDANNETDPFLKKGLSMAVDGNEPDAIRTLLEIDMEQSSSRHNDNIKIF 126
Query: 136 GSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVS 189
+S +G++G ++G++ ++ S+ P + +LI+ L G +
Sbjct: 127 DQISGFAGSMGMIGTLIGLVAMLMNM----SDPSAIGPSMAVALITTLYGAMIG 176
>gi|149193958|ref|ZP_01871056.1| motility protein a-flagellar motor component [Caminibacter
mediatlanticus TB-2]
gi|149135911|gb|EDM24389.1| motility protein a-flagellar motor component [Caminibacter
mediatlanticus TB-2]
Length = 255
Score = 35.5 bits (81), Expect = 6.4, Method: Composition-based stats.
Identities = 20/140 (14%), Positives = 55/140 (39%), Gaps = 7/140 (5%)
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQ--DRIDRMMDVAIARELE 126
++ + G+ ++ +A +E + KG + D I ++++ + +
Sbjct: 78 IKKLVDYATQARRDGILSLEQAAANEEDEFLKKGLSMAVDGNEPDTIRELLEIDLEQMDA 137
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGL 186
+ S + + +G++G ++G++ ++ S+ P + +L++ L G
Sbjct: 138 RHKKMASIFSNWAGLAGAMGMIGTLVGLVAMLLNM----SDPAAIGPAMAVALLTTLYGA 193
Query: 187 CVS-IPSSIAYNKFIEDSKK 205
+ I S NK +
Sbjct: 194 MIGNIFGSPIANKLALRNDD 213
>gi|104782796|ref|YP_609294.1| flagellar motor protein [Pseudomonas entomophila L48]
gi|95111783|emb|CAK16507.1| flagellar motor protein MotA [Pseudomonas entomophila L48]
Length = 246
Score = 35.5 bits (81), Expect = 6.4, Method: Composition-based stats.
Identities = 16/115 (13%), Positives = 43/115 (37%), Gaps = 5/115 (4%)
Query: 75 SLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSF 134
+ + +GL + + + + + I +++V + +
Sbjct: 87 TARKEGLLGLEGVADAEPDPYAR-KGLQLLVDGAEPEAIRSILEVDFLTQEARDIQAAKV 145
Query: 135 LGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVS 189
SM +GI+GAV+G++ ++A + GI + ++ + G+ +
Sbjct: 146 FESMGGYAPTIGIIGAVMGLIHVMGNLA----DPSQLGNGIAVAFVATIYGVASA 196
>gi|222100884|ref|YP_002535452.1| Motility protein A [Thermotoga neapolitana DSM 4359]
gi|221573274|gb|ACM24086.1| Motility protein A [Thermotoga neapolitana DSM 4359]
Length = 256
Score = 35.5 bits (81), Expect = 6.4, Method: Composition-based stats.
Identities = 12/57 (21%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
Query: 133 SFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVS 189
+ L S + G++G ++G++ +S+ +N P + +LI+ L G ++
Sbjct: 138 AVLESAGAYAPAFGMIGTLIGLIQMLKSL----NNPETLGPSMAVALITTLYGAILA 190
>gi|92113741|ref|YP_573669.1| MotA/TolQ/ExbB proton channel [Chromohalobacter salexigens DSM
3043]
gi|91796831|gb|ABE58970.1| outer membrane transport energization protein ExbB
[Chromohalobacter salexigens DSM 3043]
Length = 177
Score = 35.2 bits (80), Expect = 6.5, Method: Composition-based stats.
Identities = 16/92 (17%), Positives = 39/92 (42%), Gaps = 1/92 (1%)
Query: 122 ARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV-VSIPGIIESLI 180
+ ++ L +L + L+G+LG V GM+ F S++ +N G+ + +
Sbjct: 75 QELIGQLRRPLPWLKLLVGLCPLLGLLGTVTGMIQVFDSLSLTEANQARAMADGVARATL 134
Query: 181 SILLGLCVSIPSSIAYNKFIEDSKKFAMQMEG 212
L G+ V++ + + ++ ++
Sbjct: 135 PTLTGMAVAVVGLLFTTRLEHVIRREDQRLHD 166
>gi|253698906|ref|YP_003020095.1| magnesium and cobalt transporter CorA [Geobacter sp. M21]
gi|251773756|gb|ACT16337.1| magnesium and cobalt transport protein CorA [Geobacter sp. M21]
Length = 353
Score = 35.2 bits (80), Expect = 6.7, Method: Composition-based stats.
Identities = 15/106 (14%), Positives = 39/106 (36%), Gaps = 7/106 (6%)
Query: 48 NFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPI 107
L+RQ + FW L L+ + + + + + + +
Sbjct: 212 AIYRLKRQLLFLHKAFW---PLREAVSGLQRRDSQLIRDTTVIYLRDLYDHTVQVLDTLE 268
Query: 108 GIQDRIDRMMDVAIARELEEITEKLSFLGSMSSA----GLLVGILG 149
+++ + M+D+ ++ + E + L +++ LVG+ G
Sbjct: 269 TLREMLSGMLDIYLSSVSNRLNEVMKVLTIIATIFMPLSFLVGLYG 314
>gi|171677478|ref|XP_001903690.1| hypothetical protein [Podospora anserina S mat+]
gi|170936807|emb|CAP61465.1| unnamed protein product [Podospora anserina S mat+]
Length = 843
Score = 35.2 bits (80), Expect = 6.7, Method: Composition-based stats.
Identities = 16/93 (17%), Positives = 31/93 (33%), Gaps = 10/93 (10%)
Query: 47 VNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAI------FMSAMSEWKKSCD 100
+R+ R E SLE + L+ AA+ +A+ WK++ +
Sbjct: 194 RTLRDAQREVRRLESAAQRAASLERQIELLEEEQATLQAAVITTKDEARTAIHRWKQA-E 252
Query: 101 KGARSPIGIQDRID---RMMDVAIARELEEITE 130
KG +R++ R + +
Sbjct: 253 KGLSDLQAQLERMEKEAREDRERHVEVISRMER 285
>gi|119773782|ref|YP_926522.1| magnesium transporter [Shewanella amazonensis SB2B]
gi|119766282|gb|ABL98852.1| magnesium transporter, putative [Shewanella amazonensis SB2B]
Length = 321
Score = 35.2 bits (80), Expect = 6.7, Method: Composition-based stats.
Identities = 15/63 (23%), Positives = 32/63 (50%)
Query: 92 MSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAV 151
M E + + ++DR + ++R+ EE+ ++L FL +++ L +G L +
Sbjct: 221 MREIRDRLTRAIEDLDALRDRASVTQEELMSRQSEELNQRLYFLSLVTAVFLPLGFLTGL 280
Query: 152 LGM 154
LG+
Sbjct: 281 LGV 283
>gi|167034900|ref|YP_001670131.1| flagellar motor protein [Pseudomonas putida GB-1]
gi|166861388|gb|ABY99795.1| MotA/TolQ/ExbB proton channel [Pseudomonas putida GB-1]
Length = 246
Score = 35.2 bits (80), Expect = 6.8, Method: Composition-based stats.
Identities = 14/79 (17%), Positives = 34/79 (43%), Gaps = 4/79 (5%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ I +++V + + SM +GI+GAV+G++ ++A +
Sbjct: 122 EAIRSILEVDFLTQEARDIQAAKVFESMGGYAPTIGIIGAVMGLIHVMGNLA----DPSQ 177
Query: 171 SIPGIIESLISILLGLCVS 189
GI + ++ + G+ +
Sbjct: 178 LGNGIAVAFVATIYGVASA 196
>gi|26991026|ref|NP_746451.1| flagellar motor protein [Pseudomonas putida KT2440]
gi|24986056|gb|AAN69915.1|AE016630_6 flagellar motor protein MotA [Pseudomonas putida KT2440]
Length = 246
Score = 35.2 bits (80), Expect = 6.8, Method: Composition-based stats.
Identities = 14/79 (17%), Positives = 35/79 (44%), Gaps = 4/79 (5%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ I +++V + + + SM +GI+GAV+G++ ++A +
Sbjct: 122 EAIRSILEVDLLTQEGRDIQAAKVFESMGGYAPTIGIIGAVMGLIHVMGNLA----DPSQ 177
Query: 171 SIPGIIESLISILLGLCVS 189
GI + ++ + G+ +
Sbjct: 178 LGNGIAVAFVATIYGVASA 196
>gi|302335133|ref|YP_003800340.1| transcriptional regulator, XRE family [Olsenella uli DSM 7084]
gi|301318973|gb|ADK67460.1| transcriptional regulator, XRE family [Olsenella uli DSM 7084]
Length = 335
Score = 35.2 bits (80), Expect = 6.8, Method: Composition-based stats.
Identities = 20/68 (29%), Positives = 33/68 (48%)
Query: 135 LGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSI 194
L S GL VG GA + + Q++A ++ SI + LI + GL + IP++
Sbjct: 96 LRLAVSVGLFVGGSGAGMLVGALMQAMAASTNDEASSIAIGVGVLIFVAAGLALLIPTTT 155
Query: 195 AYNKFIED 202
+N F +
Sbjct: 156 GHNAFRRE 163
>gi|291613030|ref|YP_003523187.1| MotA/TolQ/ExbB proton channel [Sideroxydans lithotrophicus ES-1]
gi|291583142|gb|ADE10800.1| MotA/TolQ/ExbB proton channel [Sideroxydans lithotrophicus ES-1]
Length = 249
Score = 35.2 bits (80), Expect = 6.8, Method: Composition-based stats.
Identities = 15/53 (28%), Positives = 25/53 (47%), Gaps = 4/53 (7%)
Query: 137 SMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVS 189
S + +GILGAVLG++ QS+ GI + I+ + G+ +
Sbjct: 148 SAAGYAPTIGILGAVLGLVHVMQSLG----EPAKLGAGIAVAFIATIYGVGSA 196
>gi|295678084|ref|YP_003606608.1| flagellar motor protein MotA [Burkholderia sp. CCGE1002]
gi|295437927|gb|ADG17097.1| flagellar motor protein MotA [Burkholderia sp. CCGE1002]
Length = 286
Score = 35.2 bits (80), Expect = 6.9, Method: Composition-based stats.
Identities = 19/77 (24%), Positives = 33/77 (42%), Gaps = 3/77 (3%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI 172
I+ +MD I +E L + A GI+ AV+G++ +A V
Sbjct: 143 IESLMDEEIETHHQEGEAPAQALAKVGDAMPAFGIVAAVMGVVHT---MASADRPPAVLG 199
Query: 173 PGIIESLISILLGLCVS 189
I ++L+ LG+ +S
Sbjct: 200 EMIAQALVGTFLGILLS 216
>gi|78485280|ref|YP_391205.1| Mg2+ transporter protein, CorA-like [Thiomicrospira crunogena
XCL-2]
gi|78363566|gb|ABB41531.1| Metal ion MIT-family transporter; CorA protein [Thiomicrospira
crunogena XCL-2]
Length = 327
Score = 35.2 bits (80), Expect = 7.0, Method: Composition-based stats.
Identities = 16/97 (16%), Positives = 41/97 (42%), Gaps = 8/97 (8%)
Query: 92 MSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAV 151
+ E + +++R + ++R E++ E++ L +++ L +G +
Sbjct: 227 IRETSDRLVRHIEDIDAVRERAAVTHEELLSRVSEQLNERMYVLSIIAAIFLPLGFFTGL 286
Query: 152 LGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCV 188
LG+ ++ G N + I +L+ +G+ V
Sbjct: 287 LGI-----NVGGIPGANNANAFFIFVALL---VGIIV 315
>gi|313497821|gb|ADR59187.1| MotC [Pseudomonas putida BIRD-1]
Length = 246
Score = 35.2 bits (80), Expect = 7.1, Method: Composition-based stats.
Identities = 14/79 (17%), Positives = 35/79 (44%), Gaps = 4/79 (5%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ I +++V + + + SM +GI+GAV+G++ ++A +
Sbjct: 122 EAIRSILEVDLLTQEGRDIQAAKVFESMGGYAPTIGIIGAVMGLIHVMGNLA----DPSQ 177
Query: 171 SIPGIIESLISILLGLCVS 189
GI + ++ + G+ +
Sbjct: 178 LGNGIAVAFVATIYGVASA 196
>gi|260221394|emb|CBA29912.1| Chemotaxis protein motA [Curvibacter putative symbiont of Hydra
magnipapillata]
Length = 285
Score = 35.2 bits (80), Expect = 7.1, Method: Composition-based stats.
Identities = 22/116 (18%), Positives = 47/116 (40%), Gaps = 7/116 (6%)
Query: 74 KSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLS 133
+ K H N+G + ++++ + G + I+ +MD AI E ++
Sbjct: 110 EIFKKHPNVGSDHHVVEFVTDYLRMMVSGNLNA----HEIENIMDGAIEAHHVEAHAAVA 165
Query: 134 FLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVS 189
+ ++ GI+ AVLG++ + V I +L+ LG+ ++
Sbjct: 166 AIQRIAGGLPAFGIVAAVLGVVNT---MGSVGQPPAVLGGMIGSALVGTFLGILLA 218
>gi|163758007|ref|ZP_02165095.1| flagellar motor protein MotA [Hoeflea phototrophica DFL-43]
gi|162284296|gb|EDQ34579.1| flagellar motor protein MotA [Hoeflea phototrophica DFL-43]
Length = 290
Score = 35.2 bits (80), Expect = 7.1, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 35/75 (46%), Gaps = 3/75 (4%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI 172
I+ +MD I + + + + ++S A +GI+ AVLG++ +I V
Sbjct: 143 IEALMDEEIQTISTDRLKAYNAMSTLSDAFPAIGIIAAVLGVIKAMGAITES---PEVLG 199
Query: 173 PGIIESLISILLGLC 187
I +L+ +LG+
Sbjct: 200 GLIGAALVGTMLGIF 214
>gi|237752334|ref|ZP_04582814.1| motility protein a-flagellar motor component [Helicobacter
winghamensis ATCC BAA-430]
gi|229375823|gb|EEO25914.1| motility protein a-flagellar motor component [Helicobacter
winghamensis ATCC BAA-430]
Length = 254
Score = 35.2 bits (80), Expect = 7.2, Method: Composition-based stats.
Identities = 16/123 (13%), Positives = 46/123 (37%), Gaps = 6/123 (4%)
Query: 69 LETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPI--GIQDRIDRMMDVAIARELE 126
++ + G+ ++ + E + +G I D I +++ + R L+
Sbjct: 77 IKKLVDYSTQARRDGILSLEQQSNQEENEFLKRGLNMAIDGAEPDSIRDLLETDMDRTLD 136
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGL 186
+ ++ G+LG ++G++ ++ S+ P + +L++ G
Sbjct: 137 RHKSNAGIFDTWAAYAGAYGMLGTLIGLVAMLLNM----SDPASIGPAMAVALLTTFYGS 192
Query: 187 CVS 189
+
Sbjct: 193 FIG 195
>gi|119504700|ref|ZP_01626778.1| Possible biopolymer transport protein, ExbB family protein [marine
gamma proteobacterium HTCC2080]
gi|119459305|gb|EAW40402.1| Possible biopolymer transport protein, ExbB family protein [marine
gamma proteobacterium HTCC2080]
Length = 250
Score = 35.2 bits (80), Expect = 7.2, Method: Composition-based stats.
Identities = 29/202 (14%), Positives = 73/202 (36%), Gaps = 29/202 (14%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQFREFE-QLF--------WSGQSLETVCKSLKN 78
+ LL W++ + FITL F+ LF S L ++ K
Sbjct: 59 MLLL-------WAIALV-VREFITLESHAYIFKVDLFEDEDMDRQASSSLLSSIEKLPLE 110
Query: 79 HHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSM 138
+ L ++ +A+ + + D + + ++ A+ + +L+ L +
Sbjct: 111 IKSTPLVSVISAALRRFALTGDVHSSAG---------AIEPALDALAVQNDGRLTILRYI 161
Query: 139 SSAGLLVGILGAVLGMMGFF--QSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAY 196
+ A +G +G V G+ +A + ++ + + S + L +S+ A
Sbjct: 162 TWAIPSIGFIGTVRGIGQAMSQAELAVDGNIGPMTSS-LGVAFNSTFVALLISVFIMFAV 220
Query: 197 NKFIEDSKKFAMQMEGFANEFS 218
+ + + ++ + ++
Sbjct: 221 SMLQRRQDEQLVNIQQYVEDYI 242
>gi|124268057|ref|YP_001022061.1| chemotaxis signal transduction protein CheY [Methylibium
petroleiphilum PM1]
gi|124260832|gb|ABM95826.1| Chemotaxis signal transduction protein CheY [Methylibium
petroleiphilum PM1]
Length = 286
Score = 35.2 bits (80), Expect = 7.2, Method: Composition-based stats.
Identities = 18/77 (23%), Positives = 33/77 (42%), Gaps = 3/77 (3%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI 172
I+ +MD I E + +G ++ A GI+ AVLG++ + V
Sbjct: 145 IESLMDSEIETHHHEAHAPAAAIGRLAGALPAFGIVAAVLGVVNT---MGSVGQPPAVLG 201
Query: 173 PGIIESLISILLGLCVS 189
I +L+ LG+ ++
Sbjct: 202 GMIGSALVGTFLGILLA 218
>gi|225375332|ref|ZP_03752553.1| hypothetical protein ROSEINA2194_00957 [Roseburia inulinivorans DSM
16841]
gi|225212821|gb|EEG95175.1| hypothetical protein ROSEINA2194_00957 [Roseburia inulinivorans DSM
16841]
Length = 266
Score = 35.2 bits (80), Expect = 7.2, Method: Composition-based stats.
Identities = 12/79 (15%), Positives = 38/79 (48%), Gaps = 4/79 (5%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ + +M+ +++ E + ++F + G G++G ++G++ +++ S
Sbjct: 124 ELVRGIMETSLSCMEERHKKVIAFWEKWAELGPAWGMIGTLIGLINMLKNLEDASSI--- 180
Query: 171 SIPGIIESLISILLGLCVS 189
P + +L++ L G ++
Sbjct: 181 -GPAMSVALVTTLYGSLIA 198
>gi|46204687|ref|ZP_00049615.2| COG1291: Flagellar motor component [Magnetospirillum
magnetotacticum MS-1]
Length = 168
Score = 35.2 bits (80), Expect = 7.2, Method: Composition-based stats.
Identities = 14/77 (18%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI 172
I+ +M+ I + + + + +++ A +GI+ AVLG++ ++ + +
Sbjct: 21 IEALMEEEIGTHKKSVLKPYGAINTVAEALPALGIVAAVLGIVKAMGAL---DQSPQILG 77
Query: 173 PGIIESLISILLGLCVS 189
I +L+ G+ S
Sbjct: 78 GLIGAALVGTFFGVFAS 94
>gi|319901857|ref|YP_004161585.1| hypothetical protein Bache_2027 [Bacteroides helcogenes P 36-108]
gi|319416888|gb|ADV43999.1| protein of unknown function DUF1212 [Bacteroides helcogenes P
36-108]
Length = 447
Score = 35.2 bits (80), Expect = 7.3, Method: Composition-based stats.
Identities = 19/80 (23%), Positives = 37/80 (46%), Gaps = 3/80 (3%)
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVS 189
+ + S+ V + A+LG++ + G +N V GI SLI + + L V+
Sbjct: 357 NHVLTIPSVIPMIPGVLMYRALLGLIN-MHGVVGEVTN--VVSNGITASLIILSIALGVA 413
Query: 190 IPSSIAYNKFIEDSKKFAMQ 209
+P+ A +D ++F +
Sbjct: 414 VPNIFARRYIAKDRQRFLQE 433
>gi|228926955|ref|ZP_04090021.1| Phage tail tape measure protein, TP901 [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
gi|228832690|gb|EEM78261.1| Phage tail tape measure protein, TP901 [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
Length = 1284
Score = 35.2 bits (80), Expect = 7.3, Method: Composition-based stats.
Identities = 25/145 (17%), Positives = 58/145 (40%), Gaps = 15/145 (10%)
Query: 66 GQSLETVCKSL-KNHHNIGLAAIFMS-AMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAR 123
+L K L ++ L +F S A+ +GA+ + D + ++ +A
Sbjct: 540 SGTLHESMKDLTDQQRSMALETLFGSDAVRGATILFKEGAKGVNEMWDSMSKVTAADVAA 599
Query: 124 -ELEEITEKLSFLGSMSSA---------GLLVGIL-GAVLGMMGFFQSIAGYYSNNVVSI 172
+++ + +L+ L S S +V + + ++ F S+ G +
Sbjct: 600 TKIDTLKGRLTLLDSAFSTMKKTIGDALAPVVSVFVAGLQKLVDGFNSLPGPVQKAIAIT 659
Query: 173 PGIIESL--ISILLGLCVSIPSSIA 195
GI+ +L ++ +G+ ++ IA
Sbjct: 660 GGIVLALTAVATAIGVVLAAFGMIA 684
>gi|56461284|ref|YP_156565.1| biopolymer ExbB family transporter [Idiomarina loihiensis L2TR]
gi|56180294|gb|AAV83016.1| Possible biopolymer transport protein, ExbB family [Idiomarina
loihiensis L2TR]
Length = 256
Score = 35.2 bits (80), Expect = 7.3, Method: Composition-based stats.
Identities = 10/94 (10%), Positives = 33/94 (35%), Gaps = 1/94 (1%)
Query: 117 MDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV-SIPGI 175
++ ++ ++ + + + A +G +G V G+ ++ +
Sbjct: 148 IESSVDNIAIQLESGNNMIRYIIWAIPSIGFVGTVRGIGSALAQADKALDGDIAGMTASL 207
Query: 176 IESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQ 209
+ S L+ L +S+ + + K ++
Sbjct: 208 GVAFNSTLVALFISLILMLFMHLLNSRQDKMVIR 241
>gi|222823913|ref|YP_002575487.1| hypothetical protein Cla_0912 [Campylobacter lari RM2100]
gi|222539135|gb|ACM64236.1| conserved hypothetical protein [Campylobacter lari RM2100]
Length = 443
Score = 35.2 bits (80), Expect = 7.4, Method: Composition-based stats.
Identities = 12/93 (12%), Positives = 32/93 (34%), Gaps = 5/93 (5%)
Query: 130 EKLSFLGSMSSAGLLVGILGAVLGMMGFF-----QSIAGYYSNNVVSIPGIIESLISILL 184
+F ++ ++GILG + + AG V + G+ + +
Sbjct: 126 RNENFASVGAAIFPMLGILGTFISIAMSMPNFNSSDTAGLEQEISVLLNGVGTAFYVSIY 185
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEF 217
G+ +++ +K + + ++F
Sbjct: 186 GIFLALWWIFFEKYGSSKFQKLLNRQKNATSDF 218
>gi|152965626|ref|YP_001361410.1| MotA/TolQ/ExbB proton channel [Kineococcus radiotolerans SRS30216]
gi|151360143|gb|ABS03146.1| MotA/TolQ/ExbB proton channel [Kineococcus radiotolerans SRS30216]
Length = 257
Score = 35.2 bits (80), Expect = 7.4, Method: Composition-based stats.
Identities = 23/155 (14%), Positives = 50/155 (32%), Gaps = 6/155 (3%)
Query: 67 QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELE 126
++ + + + + L E+ ++ + A D + ++ I +
Sbjct: 79 GTIVKMAERARREGLLALEDAIKEVDDEFLRNGLQTAIDGTD-PDELYEILTAQIQAKKA 137
Query: 127 EITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGL 186
+ G M VGI G V+ + ++ S+ P I + ++ G+
Sbjct: 138 ADKQGAKIFGDMGGYAPSVGICGTVISLTVVLANL----SDAAALGPMIAGAFVATFWGV 193
Query: 187 CVS-IPSSIAYNKFIEDSKKFAMQMEGFANEFSAI 220
+ I ++ S QME AI
Sbjct: 194 ASANILYLPMQSRLTRLSALETAQMELVVEGILAI 228
>gi|114330217|ref|YP_746439.1| flagellar motor protein MotA [Nitrosomonas eutropha C91]
gi|114307231|gb|ABI58474.1| putative chemotaxis (motility protein A) transmembrane
[Nitrosomonas eutropha C91]
Length = 286
Score = 35.2 bits (80), Expect = 7.4, Method: Composition-based stats.
Identities = 25/110 (22%), Positives = 43/110 (39%), Gaps = 13/110 (11%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI 172
I+ +MD I +E + +G M A GI+ AV+G++ +A
Sbjct: 143 IENLMDGEIETHHQEGEVPVHVIGKMGDALPAFGIVAAVMGVVHT---MASVGIPPAELG 199
Query: 173 PGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILS 222
I +L+ LG+ +AY A ++E +E S +L
Sbjct: 200 KLIAAALVGTFLGI------LLAYGF----VSPLASRLEQRLHESSKLLE 239
>gi|330937710|gb|EGH41608.1| sensor histidine kinase [Pseudomonas syringae pv. pisi str. 1704B]
Length = 585
Score = 35.2 bits (80), Expect = 7.5, Method: Composition-based stats.
Identities = 22/135 (16%), Positives = 42/135 (31%), Gaps = 15/135 (11%)
Query: 19 QMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG--QSLETVCKSL 76
GLA I L S + + + LR + R+ + + L+T L
Sbjct: 301 NAGLAAAGIWLALVFLS-----LFLYQRWRLARLRERNRDELERLVQARTRDLQTAQDGL 355
Query: 77 -KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGI-----QDRIDRMMD--VAIARELEEI 128
++ L + + E + + Q RID V + ++L +
Sbjct: 356 VQSAKLAALGQMSAALAHEINQPLTAQRMQLATLRLLLDQGRIDEACKALVPVDQQLTRM 415
Query: 129 TEKLSFLGSMSSAGL 143
S L + +
Sbjct: 416 AALTSHLKTFARKSP 430
>gi|224825767|ref|ZP_03698871.1| MotA/TolQ/ExbB proton channel [Lutiella nitroferrum 2002]
gi|224601991|gb|EEG08170.1| MotA/TolQ/ExbB proton channel [Lutiella nitroferrum 2002]
Length = 287
Score = 35.2 bits (80), Expect = 7.5, Method: Composition-based stats.
Identities = 16/75 (21%), Positives = 33/75 (44%), Gaps = 1/75 (1%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI 172
++ ++D I EE+ + L + A GIL AVLG++ S+ G +
Sbjct: 142 LEGVLDQEIDAIHEELNQPSKSLHKIGEAMPGFGILAAVLGIVMTMNSV-GNGATTGEIA 200
Query: 173 PGIIESLISILLGLC 187
+ +++ +G+
Sbjct: 201 EKVGAAMVGTFIGIF 215
>gi|78485927|ref|YP_391852.1| MotA/TolQ/ExbB proton channel [Thiomicrospira crunogena XCL-2]
gi|78364213|gb|ABB42178.1| MotA/TolQ/ExbB family protein [Thiomicrospira crunogena XCL-2]
Length = 263
Score = 35.2 bits (80), Expect = 7.5, Method: Composition-based stats.
Identities = 13/56 (23%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Query: 134 FLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVS 189
L +M+SA G++G ++G++ S+ G + G+ +L++ L G+ ++
Sbjct: 153 VLMTMASAAPAFGMIGTLVGLVIMLNSMEG---DPSKIGGGLAVALLTTLYGVLMA 205
>gi|332666532|ref|YP_004449320.1| hypothetical protein Halhy_4610 [Haliscomenobacter hydrossis DSM
1100]
gi|332335346|gb|AEE52447.1| hypothetical protein Halhy_4610 [Haliscomenobacter hydrossis DSM
1100]
Length = 262
Score = 35.2 bits (80), Expect = 7.5, Method: Composition-based stats.
Identities = 23/128 (17%), Positives = 51/128 (39%), Gaps = 5/128 (3%)
Query: 104 RSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQS--I 161
R+ I D + ++D + E+ L ++ +G LG VLG+ G +
Sbjct: 135 RNEGSISDTLQ-VIDHQVEAMQEQSQSNYDILHYLAQGIPSLGFLGTVLGISGAIGKFYL 193
Query: 162 AGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221
A +S + + + L + + + +N+ ++ KF +M + + ++
Sbjct: 194 ATDFSKLPQITSMLNIAFDTTFFSLFLGLILTYVFNRTQDNENKFYTRMREYVID--NLV 251
Query: 222 SRQTEGNI 229
SR G +
Sbjct: 252 SRIFHGGV 259
>gi|226225702|ref|YP_002759808.1| chemotaxis MotA protein [Gemmatimonas aurantiaca T-27]
gi|226088893|dbj|BAH37338.1| chemotaxis MotA protein [Gemmatimonas aurantiaca T-27]
Length = 285
Score = 35.2 bits (80), Expect = 7.5, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 34/78 (43%), Gaps = 9/78 (11%)
Query: 135 LGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSI 194
+ ++ A GI+ AVLG++ SI G S I E + + L+G V I +
Sbjct: 165 ITTVGDAMPGFGIVAAVLGVIITMGSIGGAAS-------EIGEKVAAALVGTFVGI--LL 215
Query: 195 AYNKFIEDSKKFAMQMEG 212
AY F +K ++
Sbjct: 216 AYGVFGPVAKAMENRLHA 233
>gi|193222294|emb|CAL61488.2| Motility protein A [Herminiimonas arsenicoxydans]
Length = 246
Score = 35.2 bits (80), Expect = 7.5, Method: Composition-based stats.
Identities = 19/109 (17%), Positives = 45/109 (41%), Gaps = 5/109 (4%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI 172
+ ++D+ I + + + +GILGAVLG++ +++ S+
Sbjct: 124 LREVLDMEIGAYETQQRLSIKIWEAAGGYAPTIGILGAVLGLIHVMENL----SDPSRLG 179
Query: 173 PGIIESLISILLGLCVSIPSSI-AYNKFIEDSKKFAMQMEGFANEFSAI 220
GI + ++ + G+ + + +K + + E A+ F+ I
Sbjct: 180 SGIAVAFVATIYGVGFANLVFLPISSKLKAIVNRDVFRHEMLADAFAGI 228
>gi|315225328|ref|ZP_07867142.1| integral membrane protein [Capnocytophaga ochracea F0287]
gi|314944601|gb|EFS96636.1| integral membrane protein [Capnocytophaga ochracea F0287]
Length = 199
Score = 35.2 bits (80), Expect = 7.6, Method: Composition-based stats.
Identities = 25/189 (13%), Positives = 67/189 (35%), Gaps = 15/189 (7%)
Query: 30 LLFIFS-------ILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNI 82
+LF+ S I+ V+ +++ + + F + + + L ++L
Sbjct: 7 ILFLVSDSLLIPDIIVLLVLFVRALLLVG--SFYNRFITKYKNDKQLNEAIRTLTPESAE 64
Query: 83 GLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAG 142
L A+ + + + S I + D M I+ E + ++ ++ G
Sbjct: 65 QLKALLPARDNALYTQYLRDILSHIPDETYYDYM----ISNFENEGEKDIATSKLLAKIG 120
Query: 143 LLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIED 202
++G++G ++ M ++ + + + ++GL +S+ +
Sbjct: 121 PVLGLIGTLIAMSPALTGLS--TGDISKMASNMQVVFATTVVGLVISLVGLVTLQFKQRW 178
Query: 203 SKKFAMQME 211
K +E
Sbjct: 179 YSKEINNLE 187
>gi|168698237|ref|ZP_02730514.1| Possible biopolymer transport protein, ExbB family [Gemmata
obscuriglobus UQM 2246]
Length = 632
Score = 35.2 bits (80), Expect = 7.6, Method: Composition-based stats.
Identities = 22/165 (13%), Positives = 51/165 (30%), Gaps = 21/165 (12%)
Query: 57 REFEQLFWSGQSLETVCKSLKNHHN----IGLAAIFMSAMSEWKKSCDKGARSPIGIQDR 112
E S ++L + + + I L I S + + P +Q R
Sbjct: 362 DHVEARVRSLEALRQKYREGQGRDSVIACIPLE-IAYSGYCGLIAANMRAEGVPAFVQTR 420
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA--------GY 164
+ ++ A +R+ + L +L +G +G V+G+
Sbjct: 421 VSLFLERAGSRQW--LFRFLVWL------IPSIGFVGTVIGIGDALLGTGDVLSTNPLQQ 472
Query: 165 YSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQ 209
S + + + + L +SI + + ++ +
Sbjct: 473 QSAIQAIAGKLGTAFDTTFVALILSIVTMFMIGSIQKSEEELIQR 517
>gi|157164025|ref|YP_001466587.1| permease [Campylobacter concisus 13826]
gi|112800734|gb|EAT98078.1| chemotaxis protein PomA [Campylobacter concisus 13826]
Length = 255
Score = 35.2 bits (80), Expect = 7.6, Method: Composition-based stats.
Identities = 17/125 (13%), Positives = 48/125 (38%), Gaps = 6/125 (4%)
Query: 67 QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQ--DRIDRMMDVAIARE 124
++++ V G+ A+ +E + KG + D I ++++ I +
Sbjct: 76 ETIKKVVDYSTKARRDGILALESEVNNESNQFLKKGLSMAVDGNEPDAIRALLEIDIDQT 135
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILL 184
+ + +G++G ++G++ ++ S+ P + +L++ L
Sbjct: 136 STRHANNIKIFEQVGGFAGAMGMIGTLIGLVAMLLNM----SDPSAIGPSMAVALLTTLY 191
Query: 185 GLCVS 189
G +
Sbjct: 192 GAMIG 196
>gi|255549674|ref|XP_002515888.1| conserved hypothetical protein [Ricinus communis]
gi|223544793|gb|EEF46308.1| conserved hypothetical protein [Ricinus communis]
Length = 655
Score = 35.2 bits (80), Expect = 7.7, Method: Composition-based stats.
Identities = 15/73 (20%), Positives = 23/73 (31%), Gaps = 12/73 (16%)
Query: 14 FALFMQM-GLAVKCI------ITLL--FIFSILSWSVIIQKSVNFITLRRQFREFEQLFW 64
+ LF GL V+ + +L F SI+ W+V+ F +
Sbjct: 214 WLLFPAAYGLVVQLVDFGSLQFLVLPTFFMSIILWAVLF---FQFWKRKNSALLARWQMH 270
Query: 65 SGQSLETVCKSLK 77
S K L
Sbjct: 271 DSASANQGYKFLG 283
>gi|158429620|pdb|2Q1Z|A Chain A, Crystal Structure Of Rhodobacter Sphaeroides Sige In
Complex With The Anti-Sigma Chrr
gi|158429622|pdb|2Q1Z|C Chain C, Crystal Structure Of Rhodobacter Sphaeroides Sige In
Complex With The Anti-Sigma Chrr
Length = 184
Score = 35.2 bits (80), Expect = 7.7, Method: Composition-based stats.
Identities = 21/108 (19%), Positives = 34/108 (31%), Gaps = 15/108 (13%)
Query: 34 FSILSWSVIIQKSVNFITLRR-QFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAM 92
S+ +W I ++ LR+ + E E LFW + A
Sbjct: 77 ASVATWIFTIARNRRIDGLRKDRQPEPEDLFW-------------GPDSEPDQADVYEMQ 123
Query: 93 SEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSS 140
E + AR P + I+R + L LG++ S
Sbjct: 124 QENARLGRAIARLPEAQRALIERAFFGDLTHRELAAETGLP-LGTIKS 170
>gi|114764163|ref|ZP_01443401.1| Mg2+ and Co2+ transporters [Pelagibaca bermudensis HTCC2601]
gi|114543315|gb|EAU46331.1| Mg2+ and Co2+ transporters [Roseovarius sp. HTCC2601]
Length = 330
Score = 35.2 bits (80), Expect = 7.7, Method: Composition-based stats.
Identities = 20/125 (16%), Positives = 45/125 (36%), Gaps = 16/125 (12%)
Query: 71 TVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITE 130
++L+ L + ++E + ++ +++R+ + D + E +
Sbjct: 209 DALRALQTGQPAWLESDDQRHLAEELDALERVVEDADAMRERMALVRDELNGQASERLNR 268
Query: 131 KLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSI 190
+ L +S+ L +G L + G+ NV +PG E L + V
Sbjct: 269 NMYLLSILSAVFLPLGFLTGLFGI-------------NVAGLPGTGEPL---AFWIFVGA 312
Query: 191 PSSIA 195
+A
Sbjct: 313 LVIVA 317
>gi|158320428|ref|YP_001512935.1| stage II sporulation P family protein [Alkaliphilus oremlandii
OhILAs]
gi|158140627|gb|ABW18939.1| Stage II sporulation P family protein [Alkaliphilus oremlandii
OhILAs]
Length = 400
Score = 35.2 bits (80), Expect = 7.7, Method: Composition-based stats.
Identities = 25/133 (18%), Positives = 46/133 (34%), Gaps = 28/133 (21%)
Query: 110 QDRIDRMMDVAIAREL---EEITEKLSFLGSMSSAGLLVGILG---------------AV 151
QD R M + + L E + ++ + + L G
Sbjct: 274 QDLTPRAMLLEMGTYLHTRERAEKSAGYISEIITTALFGGTFKEENNAGVNKVEGNKPTG 333
Query: 152 LGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQME 211
G + QSI+ + + GI+ LI ++LG I + +++ +M
Sbjct: 334 TGTVNKAQSISKSNTGS---GTGIMAVLIVVVLG-------GIGFMFLSSGGREWKSKMS 383
Query: 212 GFANEFSAILSRQ 224
F EF+ L R+
Sbjct: 384 NFKQEFANFLGRK 396
>gi|99082791|ref|YP_614945.1| flagellar motor protein MotA [Ruegeria sp. TM1040]
gi|99039071|gb|ABF65683.1| Chemotaxis motA protein (Motility protein A) [Ruegeria sp. TM1040]
Length = 289
Score = 35.2 bits (80), Expect = 7.7, Method: Composition-based stats.
Identities = 19/93 (20%), Positives = 39/93 (41%), Gaps = 7/93 (7%)
Query: 97 KSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMG 156
+S P +++ +++ ++ + L L +M+ +GI+ AVLG++
Sbjct: 132 RSASMNYDDPHQVEEVLEKRIEANLHHALHSSHA----LQTMADGLPALGIVAAVLGVIK 187
Query: 157 FFQSIAGYYSNNVVSIPGIIESLISILLGLCVS 189
SI V I +L+ LG+ +S
Sbjct: 188 TMASI---DQPPEVLGKMIGGALVGTFLGVFLS 217
>gi|167574626|ref|ZP_02367500.1| flagellar motor protein MotA [Burkholderia oklahomensis C6786]
Length = 283
Score = 35.2 bits (80), Expect = 7.7, Method: Composition-based stats.
Identities = 22/124 (17%), Positives = 47/124 (37%), Gaps = 12/124 (9%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
Q ++ M+D + E+ L ++ A GIL AVLG++ +I G S+
Sbjct: 140 QHELESMLDQELEAIESELMRPSRSLSKVAEAMPGFGILAAVLGIVTTMANIGGNVSDIG 199
Query: 170 VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFS---AILSRQTE 226
+ + +++ +G+ + Y + ++ + F +L Q
Sbjct: 200 LQV---AAAMVGTFIGI------LLCYGVLEPLASAMVHRVNSEISAFECVKVVLCAQVA 250
Query: 227 GNIS 230
G +
Sbjct: 251 GKPT 254
>gi|167567202|ref|ZP_02360118.1| flagellar motor protein MotA [Burkholderia oklahomensis EO147]
Length = 281
Score = 35.2 bits (80), Expect = 7.7, Method: Composition-based stats.
Identities = 22/124 (17%), Positives = 47/124 (37%), Gaps = 12/124 (9%)
Query: 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNV 169
Q ++ M+D + E+ L ++ A GIL AVLG++ +I G S+
Sbjct: 138 QHELESMLDQELEAIESELMRPSRSLSKVAEAMPGFGILAAVLGIVTTMANIGGNVSDIG 197
Query: 170 VSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFS---AILSRQTE 226
+ + +++ +G+ + Y + ++ + F +L Q
Sbjct: 198 LQV---AAAMVGTFIGI------LLCYGVLEPLASAMVHRVNSEISAFECVKVVLCAQVA 248
Query: 227 GNIS 230
G +
Sbjct: 249 GKPT 252
>gi|152980181|ref|YP_001353772.1| MotA chemotaxis protein [Janthinobacterium sp. Marseille]
gi|151280258|gb|ABR88668.1| MotA chemotaxis protein [Janthinobacterium sp. Marseille]
Length = 246
Score = 35.2 bits (80), Expect = 7.7, Method: Composition-based stats.
Identities = 18/107 (16%), Positives = 43/107 (40%), Gaps = 8/107 (7%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI 172
+ ++D+ I + + +GILGAVLG++ +++ S+
Sbjct: 124 LRDVLDLEIGAYETRQRLSIKIWEAAGGYAPTIGILGAVLGLIHVMENL----SDPSRLG 179
Query: 173 PGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSA 219
GI + ++ + G+ + ++ + K + + F +E A
Sbjct: 180 SGIAVAFVATIYGVGFA---NLIFLPISSKLKALVNR-DIFKHEMLA 222
>gi|4378862|gb|AAD19730.1| motility protein A [Zymomonas mobilis subsp. mobilis ZM4]
Length = 225
Score = 35.2 bits (80), Expect = 7.8, Method: Composition-based stats.
Identities = 17/86 (19%), Positives = 34/86 (39%), Gaps = 8/86 (9%)
Query: 104 RSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAG 163
R P + I ++ R I + V ++G V+G++ F ++
Sbjct: 112 RDPDDFRQWITGQLEKRKNRHQGAINFWY----IVGDVAPSVAMIGTVVGLVNMFSHLSD 167
Query: 164 YYSNNVVSIPGIIESLISILLGLCVS 189
S P + ++++ L GLC+S
Sbjct: 168 VNS----LGPSMAMAILTTLYGLCLS 189
>gi|315654203|ref|ZP_07907111.1| conserved hypothetical protein [Mobiluncus curtisii ATCC 51333]
gi|315491238|gb|EFU80855.1| conserved hypothetical protein [Mobiluncus curtisii ATCC 51333]
Length = 392
Score = 35.2 bits (80), Expect = 7.9, Method: Composition-based stats.
Identities = 24/121 (19%), Positives = 47/121 (38%), Gaps = 17/121 (14%)
Query: 6 LAIMDISIFAL--FMQMGLAVKCIIT--LLFIFSILSWSVIIQKSVNFITLRRQFREFEQ 61
L M +++ A+ F G ++ ++ I + +SW VI K R Q R+F+Q
Sbjct: 134 LGAMALALIAVVAFAATGFLAWWVMAAPVMGIGATISWGVIAAK-----RGREQDRQFQQ 188
Query: 62 LFWSGQSLETVCKSLKNHH--NIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDV 119
S+ T+ K L L ++ M +W + + + + + +
Sbjct: 189 ------SIRTLEKRLAQSPAGRAALQSVGMRGAKQWARVAATSLAGGKQMPGTLAQAVRM 242
Query: 120 A 120
A
Sbjct: 243 A 243
>gi|7416777|dbj|BAA94026.1| ORF468 [Rubrivivax gelatinosus]
Length = 468
Score = 35.2 bits (80), Expect = 7.9, Method: Composition-based stats.
Identities = 23/135 (17%), Positives = 46/135 (34%), Gaps = 13/135 (9%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAI 87
+ L ++ SW + + + R + + W V ++ + L A
Sbjct: 232 MIGLPRQTMASWCATVDRLIAMGPERIRLARYRHQPWHAP--AQVAIDTESLPSPALMAE 289
Query: 88 FMSAMSEWKKSCD---KGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLL 144
A +E ++ GA + D + R MD + L + + A +
Sbjct: 290 LARASAEMLRNAGYRWIGADQFVLEHDELSRAMDDG------RLRRSLISY-TAAPATPM 342
Query: 145 VGIL-GAVLGMMGFF 158
+G+ GAV + G
Sbjct: 343 IGLGVGAVGEIDGAM 357
>gi|258516607|ref|YP_003192829.1| MotA/TolQ/ExbB proton channel [Desulfotomaculum acetoxidans DSM
771]
gi|257780312|gb|ACV64206.1| MotA/TolQ/ExbB proton channel [Desulfotomaculum acetoxidans DSM
771]
Length = 217
Score = 35.2 bits (80), Expect = 7.9, Method: Composition-based stats.
Identities = 7/87 (8%), Positives = 34/87 (39%), Gaps = 2/87 (2%)
Query: 138 MSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYN 197
++ G ++G++ ++ + ++ + + ++ + + + GL + + +
Sbjct: 128 VARLGPMLGLMATLIPLGPGMIALGQGDTKTL--ADSLLTAFDATVSGLAAAGVAFVISR 185
Query: 198 KFIEDSKKFAMQMEGFANEFSAILSRQ 224
+ + +E +L+R+
Sbjct: 186 LRKRWYEDYLSSLEAMMESLLEVLARE 212
>gi|148546770|ref|YP_001266872.1| flagellar motor protein [Pseudomonas putida F1]
gi|148510828|gb|ABQ77688.1| MotA/TolQ/ExbB proton channel [Pseudomonas putida F1]
Length = 246
Score = 35.2 bits (80), Expect = 7.9, Method: Composition-based stats.
Identities = 14/79 (17%), Positives = 34/79 (43%), Gaps = 4/79 (5%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ I +++V + + SM +GI+GAV+G++ ++A +
Sbjct: 122 EAIRSILEVDFLTQEGRDIQAAKVFESMGGYAPTIGIIGAVMGLIHVMGNLA----DPSQ 177
Query: 171 SIPGIIESLISILLGLCVS 189
GI + ++ + G+ +
Sbjct: 178 LGNGIAVAFVATIYGVASA 196
>gi|219670207|ref|YP_002460642.1| MotA/TolQ/ExbB proton channel [Desulfitobacterium hafniense DCB-2]
gi|219540467|gb|ACL22206.1| MotA/TolQ/ExbB proton channel [Desulfitobacterium hafniense DCB-2]
Length = 257
Score = 35.2 bits (80), Expect = 8.0, Method: Composition-based stats.
Identities = 17/111 (15%), Positives = 41/111 (36%), Gaps = 5/111 (4%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
D +++ IA + +S + +GI+G V+G++ ++ ++
Sbjct: 122 DITREILESNIAVMEKRHKVGISVFEAAGGYSPTLGIIGTVMGLVHVLGNL----TDPDS 177
Query: 171 SIPGIIESLISILLGLCVSIPSSI-AYNKFIEDSKKFAMQMEGFANEFSAI 220
I + ++ L G+ + + K + K ME + +I
Sbjct: 178 LSKSIAGAFLATLYGVAFANLLYLPIATKLKQKDKIEVASMEMIMDGILSI 228
>gi|330981497|gb|EGH79600.1| sensor histidine kinase [Pseudomonas syringae pv. aptata str. DSM
50252]
Length = 585
Score = 35.2 bits (80), Expect = 8.1, Method: Composition-based stats.
Identities = 22/135 (16%), Positives = 42/135 (31%), Gaps = 15/135 (11%)
Query: 19 QMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSG--QSLETVCKSL 76
GLA I L S + + + LR + R+ + + L+T L
Sbjct: 301 NAGLAAAGIWLALVFLS-----LFLYQRWRLARLRERNRDELERLVQARTRDLQTAQDGL 355
Query: 77 -KNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGI-----QDRIDRMMD--VAIARELEEI 128
++ L + + E + + Q RID V + ++L +
Sbjct: 356 VQSAKLAALGQMSAALAHEINQPLTAQRMQLATLRLLLDQGRIDEACKALVPVDQQLTRM 415
Query: 129 TEKLSFLGSMSSAGL 143
S L + +
Sbjct: 416 AALTSHLKTFARKSP 430
>gi|145295168|ref|YP_001137989.1| hypothetical protein cgR_1110 [Corynebacterium glutamicum R]
gi|140845088|dbj|BAF54087.1| hypothetical protein [Corynebacterium glutamicum R]
Length = 276
Score = 35.2 bits (80), Expect = 8.1, Method: Composition-based stats.
Identities = 11/118 (9%), Positives = 32/118 (27%), Gaps = 8/118 (6%)
Query: 26 CIITLLFIFSILSWSVIIQKSVNFITLRRQFREF--EQLFWSGQSLETVCKSLKNHHNIG 83
I+ L I + + + ++ R+ E+ + + E ++
Sbjct: 127 LIMVTLVAALIA-----VVRIILLRR-NQESRQVSGERTRRAQREAEEANQNAARRARAQ 180
Query: 84 LAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSA 141
+ S + S + + + I R + + + F +
Sbjct: 181 STRVQSSKTRNRRAQPTGDTGSQVTVDELIRRSQERRQTVAQRQTERGVPFTPTPGPV 238
>gi|15643440|ref|NP_228484.1| motility protein A [Thermotoga maritima MSB8]
gi|4981199|gb|AAD35759.1|AE001740_5 motility protein A [Thermotoga maritima MSB8]
Length = 262
Score = 35.2 bits (80), Expect = 8.1, Method: Composition-based stats.
Identities = 11/57 (19%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
Query: 133 SFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVS 189
+ L S + G++G ++G++ +S+ ++ P + +LI+ L G ++
Sbjct: 144 AVLESAGAYAPAFGMIGTLIGLIQMLKSL----NDPETLGPSMAVALITTLYGAILA 196
>gi|319956999|ref|YP_004168262.1| ABC transporter related protein [Nitratifractor salsuginis DSM
16511]
gi|319419403|gb|ADV46513.1| ABC transporter related protein [Nitratifractor salsuginis DSM
16511]
Length = 588
Score = 35.2 bits (80), Expect = 8.1, Method: Composition-based stats.
Identities = 36/168 (21%), Positives = 63/168 (37%), Gaps = 23/168 (13%)
Query: 11 ISIFALFMQMGLAVKCII-TLLFIFSILS--WSVIIQ-K-SVNFITLRRQFREFEQLFWS 65
IS+ L + V II L +F +++ V K + N L+R+ + F S
Sbjct: 159 ISVLTLVLTA--VVLLIIDWKLALFILVTNPVVVFFTAKLARNVGRLKREENRAVEAFQS 216
Query: 66 G--QSLETVCK-SLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIA 122
++LE + N + I A+ +S + G +S DR M ++
Sbjct: 217 ALTETLELFHQIRAANKEEYFFSRIIREALGLRDRSVEYGYKS--------DRAMRLSFL 268
Query: 123 RELEEIT--EKLSFLGSM---SSAGLLVGILGAVLGMMGFFQSIAGYY 165
L +S L S GL++ + G + MM Q + +
Sbjct: 269 IFLSGYELFRSVSILAVAYGGLSVGLMLAVFGYLWIMMTPTQDVINFQ 316
>gi|291286230|ref|YP_003503046.1| MotA/TolQ/ExbB proton channel [Denitrovibrio acetiphilus DSM 12809]
gi|290883390|gb|ADD67090.1| MotA/TolQ/ExbB proton channel [Denitrovibrio acetiphilus DSM 12809]
Length = 254
Score = 35.2 bits (80), Expect = 8.1, Method: Composition-based stats.
Identities = 16/99 (16%), Positives = 44/99 (44%), Gaps = 7/99 (7%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ I +++ + + S LG M + G +G++G ++G++ QS+ +
Sbjct: 121 EVIKNILETELEYMVSRHKLGASVLGCMEAFGPAMGMIGTLIGLVAMLQSM----EDPST 176
Query: 171 SIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQ 209
P + +L++ + G ++ +++ F + + Q
Sbjct: 177 IGPAMAVALLTTMYG---AMLANLFAGPFRIKIEVRSGQ 212
>gi|119094109|gb|ABL60939.1| flagellar motor protein MotA [uncultured marine bacterium
HF10_19P19]
Length = 253
Score = 35.2 bits (80), Expect = 8.1, Method: Composition-based stats.
Identities = 10/91 (10%), Positives = 38/91 (41%), Gaps = 7/91 (7%)
Query: 117 MDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGII 176
++ I + + + +G++G ++G++ ++ S+ P +
Sbjct: 125 LNKEIKAMKNRHEVNQNAVKAWIDIAPAMGMVGTLIGLVLMLGNM----SDPKAIGPAMA 180
Query: 177 ESLISILLGLCVSIPSSIAYNKFIEDSKKFA 207
+L++ + G +I +++ + + +K+
Sbjct: 181 VALLTTMYG---AIIANVLFLPLLNKLEKYT 208
>gi|157370798|ref|YP_001478787.1| Mg2 transporter protein CorA family protein [Serratia
proteamaculans 568]
gi|157322562|gb|ABV41659.1| Mg2 transporter protein CorA family protein [Serratia
proteamaculans 568]
Length = 342
Score = 35.2 bits (80), Expect = 8.1, Method: Composition-based stats.
Identities = 17/107 (15%), Positives = 40/107 (37%), Gaps = 3/107 (2%)
Query: 48 NFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPI 107
+RR F++L + + L N L+ + + ++ +
Sbjct: 200 ELGRMRRMLLRFQRLL--APEPAALFRLL-NRPPTWLSRDVVQDLRQFTEEFTVVLNDLA 256
Query: 108 GIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGM 154
+ +RI + + A+++E+ L L ++ L + I+ GM
Sbjct: 257 SLTERIRLLQEEIGAKQMEQNNRTLYTLTVITVLALPINIVAGFFGM 303
>gi|89895778|ref|YP_519265.1| hypothetical protein DSY3032 [Desulfitobacterium hafniense Y51]
gi|89335226|dbj|BAE84821.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 257
Score = 35.2 bits (80), Expect = 8.1, Method: Composition-based stats.
Identities = 17/111 (15%), Positives = 41/111 (36%), Gaps = 5/111 (4%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
D +++ IA + +S + +GI+G V+G++ ++ ++
Sbjct: 122 DITREILESNIAVMEKRHKVGISVFEAAGGYSPTLGIIGTVMGLVHVLGNL----TDPDS 177
Query: 171 SIPGIIESLISILLGLCVSIPSSI-AYNKFIEDSKKFAMQMEGFANEFSAI 220
I + ++ L G+ + + K + K ME + +I
Sbjct: 178 LSKSIAGAFLATLYGVAFANLLYLPIATKLKQKDKIEVASMEMIMDGILSI 228
>gi|300694373|ref|YP_003750346.1| mota: chemotaxis protein; proton conductor component of flagella
motor, torque generator [Ralstonia solanacearum PSI07]
gi|299076410|emb|CBJ35726.1| MotA: chemotaxis protein; proton conductor component of flagella
motor, torque generator [Ralstonia solanacearum PSI07]
Length = 286
Score = 35.2 bits (80), Expect = 8.2, Method: Composition-based stats.
Identities = 15/77 (19%), Positives = 30/77 (38%), Gaps = 3/77 (3%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI 172
I+ +MD I E + + + A GI+ AV+G++ +
Sbjct: 143 IEALMDQEIDTHHHEAEQPARIITKVGDAMPAFGIVAAVMGVVHT---MGSVGLPPAELG 199
Query: 173 PGIIESLISILLGLCVS 189
I +L+ LG+ ++
Sbjct: 200 KLIASALVGTFLGILLA 216
>gi|295690962|ref|YP_003594655.1| MotA/TolQ/Exbb proton channel [Caulobacter segnis ATCC 21756]
gi|295432865|gb|ADG12037.1| MotA/TolQ/ExbB proton channel [Caulobacter segnis ATCC 21756]
Length = 288
Score = 35.2 bits (80), Expect = 8.2, Method: Composition-based stats.
Identities = 26/134 (19%), Positives = 48/134 (35%), Gaps = 10/134 (7%)
Query: 97 KSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMG 156
+ P ++D +++ ++ LE L SM+ A +GI+ AVLG++
Sbjct: 133 RMMTMNLEDPHQVEDAMEKQLEKHHHEALEPAHA----LQSMADALPALGIVAAVLGVIK 188
Query: 157 FFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANE 216
SI V I +L+ LG+ ++ + + F
Sbjct: 189 TMGSIT---EPPAVLGGMIGGALVGTFLGVFMAYGLV---GPMAARLQAVVNEDAAFYKI 242
Query: 217 FSAILSRQTEGNIS 230
A+L GN +
Sbjct: 243 IQAVLVAHLHGNAA 256
>gi|253998498|ref|YP_003050561.1| MotA/TolQ/ExbB proton channel [Methylovorus sp. SIP3-4]
gi|313200584|ref|YP_004039242.1| mota/tolq/exbb proton channel [Methylovorus sp. MP688]
gi|253985177|gb|ACT50034.1| MotA/TolQ/ExbB proton channel [Methylovorus sp. SIP3-4]
gi|312439900|gb|ADQ84006.1| MotA/TolQ/ExbB proton channel [Methylovorus sp. MP688]
Length = 246
Score = 35.2 bits (80), Expect = 8.3, Method: Composition-based stats.
Identities = 13/53 (24%), Positives = 27/53 (50%), Gaps = 4/53 (7%)
Query: 137 SMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVS 189
S +GILGAVLG++ +++ S+ GI + ++ + G+ ++
Sbjct: 148 SAGGYAPTIGILGAVLGLIHVMENL----SDPSRLGSGIAVAFVATIYGVGLA 196
>gi|284051106|ref|ZP_06381316.1| biopolymer transport ExbB like protein [Arthrospira platensis
str. Paraca]
Length = 117
Score = 35.2 bits (80), Expect = 8.3, Method: Composition-based stats.
Identities = 15/67 (22%), Positives = 24/67 (35%), Gaps = 5/67 (7%)
Query: 28 ITLLFIFSILSWSVIIQKSV----NFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIG 83
+ L + SILS S II++ RR + GQ + K +N
Sbjct: 14 MWPLMVLSILSISTIIERLWFWGNTLTRERRIVNRVLDVARRGQ-WGMAYQIAKQSNNRP 72
Query: 84 LAAIFMS 90
+ F +
Sbjct: 73 MGRFFYA 79
>gi|315499554|ref|YP_004088357.1| mota/tolq/exbb proton channel [Asticcacaulis excentricus CB 48]
gi|315417566|gb|ADU14206.1| MotA/TolQ/ExbB proton channel [Asticcacaulis excentricus CB 48]
Length = 288
Score = 35.2 bits (80), Expect = 8.3, Method: Composition-based stats.
Identities = 24/137 (17%), Positives = 48/137 (35%), Gaps = 16/137 (11%)
Query: 97 KSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMG 156
+ P ++D +++ ++ + + S++ A +GI+ AVLG++
Sbjct: 133 RMMTMNLEDPHQVEDAMEKQLEKHHHEAMHPAHA----MQSVADALPALGIVIAVLGVIK 188
Query: 157 FFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNK---FIEDSKKFAMQMEGF 213
+I V I +L+ LG+ +AY F + F
Sbjct: 189 TMGAIT---EPPEVLGGMIGGALVGTFLGV------MLAYGLVGPFATRMNGVVEEEAAF 239
Query: 214 ANEFSAILSRQTEGNIS 230
A+L GN +
Sbjct: 240 YKIIQAVLVAHLHGNAA 256
>gi|170722825|ref|YP_001750513.1| flagellar motor protein [Pseudomonas putida W619]
gi|169760828|gb|ACA74144.1| MotA/TolQ/ExbB proton channel [Pseudomonas putida W619]
Length = 246
Score = 35.2 bits (80), Expect = 8.3, Method: Composition-based stats.
Identities = 14/79 (17%), Positives = 34/79 (43%), Gaps = 4/79 (5%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ I +++V + + SM +GI+GAV+G++ ++A +
Sbjct: 122 EAIRSILEVDFLTQEGRDIQAAKVFESMGGYAPTIGIIGAVMGLIHVMGNLA----DPSQ 177
Query: 171 SIPGIIESLISILLGLCVS 189
GI + ++ + G+ +
Sbjct: 178 LGNGIAVAFVATIYGVASA 196
>gi|312884944|ref|ZP_07744634.1| flagellar motor protein PomA [Vibrio caribbenthicus ATCC BAA-2122]
gi|309367421|gb|EFP94983.1| flagellar motor protein PomA [Vibrio caribbenthicus ATCC BAA-2122]
Length = 254
Score = 35.2 bits (80), Expect = 8.4, Method: Composition-based stats.
Identities = 10/75 (13%), Positives = 29/75 (38%), Gaps = 4/75 (5%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
D + + I+ E + + +G++G ++G++ ++ +
Sbjct: 119 DVVRSALQKDISLTDERHDSGCNVFRAFGDVSPAMGMIGTLVGLVAMLSNM----DDPKS 174
Query: 171 SIPGIIESLISILLG 185
P + +L++ L G
Sbjct: 175 IGPAMAVALLTTLYG 189
>gi|308182924|ref|YP_003927051.1| hypothetical protein HPPC_03875 [Helicobacter pylori PeCan4]
gi|308065109|gb|ADO07001.1| hypothetical protein HPPC_03875 [Helicobacter pylori PeCan4]
Length = 356
Score = 34.8 bits (79), Expect = 8.5, Method: Composition-based stats.
Identities = 23/157 (14%), Positives = 47/157 (29%), Gaps = 18/157 (11%)
Query: 49 FITLRRQFREFEQLFWSGQ-SLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDK----GA 103
F + E ++ Q + ++ + + +
Sbjct: 36 FKKAEERLEETKKRVELAQSDCKNAFARFGEKKLHAISRGVSRFVEHFNQLKGHEFVINN 95
Query: 104 RSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAG 163
IQ+++ ++V + LS L S+ G VGIL G + I+
Sbjct: 96 MDMQNIQEQVSEALNVVNKCK----EMGLSDLASLGGVGATVGILAT----YGAYTGISA 147
Query: 164 YYSNNVV-----SIPGIIESLISILLGLCVSIPSSIA 195
V+ ++ + IS+ GL + I
Sbjct: 148 AAGGTVLSSLSGALAWMSGGAISLGGGLAAGSMALIG 184
>gi|187926230|ref|YP_001892575.1| flagellar motor protein MotA [Ralstonia pickettii 12J]
gi|241665718|ref|YP_002984077.1| flagellar motor protein MotA [Ralstonia pickettii 12D]
gi|187727984|gb|ACD29148.1| flagellar motor protein MotA [Ralstonia pickettii 12J]
gi|240867745|gb|ACS65405.1| flagellar motor protein MotA [Ralstonia pickettii 12D]
Length = 286
Score = 34.8 bits (79), Expect = 8.5, Method: Composition-based stats.
Identities = 15/77 (19%), Positives = 30/77 (38%), Gaps = 3/77 (3%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI 172
I+ +MD I E + + + A GI+ AV+G++ +
Sbjct: 143 IEALMDQEIDTHHHEAEQPARIITKVGDAMPAFGIVAAVMGVVHT---MGSVGLPPAELG 199
Query: 173 PGIIESLISILLGLCVS 189
I +L+ LG+ ++
Sbjct: 200 KLIASALVGTFLGILLA 216
>gi|270262021|ref|ZP_06190293.1| transporter [Serratia odorifera 4Rx13]
gi|270043897|gb|EFA16989.1| transporter [Serratia odorifera 4Rx13]
Length = 342
Score = 34.8 bits (79), Expect = 8.5, Method: Composition-based stats.
Identities = 17/107 (15%), Positives = 40/107 (37%), Gaps = 3/107 (2%)
Query: 48 NFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPI 107
+RR F++L + + L N L+ + + ++ +
Sbjct: 200 ELGRMRRMLLRFQRLL--APEPAALFRLL-NRPPAWLSRDVVQDLRQFTEEFTVVLNDLA 256
Query: 108 GIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGM 154
+ +RI + + A+++E+ L L ++ L + I+ GM
Sbjct: 257 SLTERIRLLQEEIGAKQMEQNNRTLYTLTVITVLALPINIVAGFFGM 303
>gi|228471113|ref|ZP_04055937.1| MotA/TolQ/ExbB proton channel family domain protein [Porphyromonas
uenonis 60-3]
gi|228307121|gb|EEK16182.1| MotA/TolQ/ExbB proton channel family domain protein [Porphyromonas
uenonis 60-3]
Length = 205
Score = 34.8 bits (79), Expect = 8.5, Method: Composition-based stats.
Identities = 18/158 (11%), Positives = 53/158 (33%), Gaps = 16/158 (10%)
Query: 44 QKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGA 103
+++ + L+R++ Q + L + + L + E +S
Sbjct: 39 ERAQRYKRLQRRY-FAHQREDASALLGRLRQELGGESQ---ETARLDLFEELLRSLLTAP 94
Query: 104 RSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAG 163
+ + I + ++L + ++ G ++G++G ++ M ++
Sbjct: 95 AAERSLL----------IGEYELRLDKRLVYPQVLTKFGPILGLMGTLIPMGPALVGLSS 144
Query: 164 YYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIE 201
+ + + + +LGL VS + +
Sbjct: 145 G--DMATMAYNMQVAFATTVLGLFVSAIGYLTLQRLHR 180
>gi|241661770|ref|YP_002980130.1| hypothetical protein Rpic12D_0148 [Ralstonia pickettii 12D]
gi|240863797|gb|ACS61458.1| protein of unknown function DUF883 ElaB [Ralstonia pickettii 12D]
Length = 141
Score = 34.8 bits (79), Expect = 8.6, Method: Composition-based stats.
Identities = 18/117 (15%), Positives = 34/117 (29%), Gaps = 2/117 (1%)
Query: 51 TLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQ 110
RR +S L + E D+ +R+
Sbjct: 19 RARRVMDSASDAVDHARSASRPAVEDVQSLLRSLEDAIHTLTDEGSAEADRASRTLQARA 78
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLL--VGILGAVLGMMGFFQSIAGYY 165
D++ R + + E + L +A VG+ A+ +G ++AG
Sbjct: 79 DQLRRAANERAHQARERMDWALGRAEETITAAPFRAVGVAVAIGAAIGLVVALAGSG 135
>gi|120554887|ref|YP_959238.1| flagellar motor protein [Marinobacter aquaeolei VT8]
gi|120324736|gb|ABM19051.1| MotA/TolQ/ExbB proton channel [Marinobacter aquaeolei VT8]
Length = 246
Score = 34.8 bits (79), Expect = 8.7, Method: Composition-based stats.
Identities = 14/79 (17%), Positives = 35/79 (44%), Gaps = 4/79 (5%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+ I +M+V + + E +M +GI+GAV+G++ ++ +
Sbjct: 122 ESIRSIMEVDLETREQRDLESARVYEAMGGYSPTIGIIGAVMGLIQVMTNL----EDPQS 177
Query: 171 SIPGIIESLISILLGLCVS 189
GI + ++ + G+ ++
Sbjct: 178 LGGGIATAFVATIYGVALA 196
>gi|293416243|ref|ZP_06658883.1| hypothetical protein ECDG_03846 [Escherichia coli B185]
gi|291432432|gb|EFF05414.1| hypothetical protein ECDG_03846 [Escherichia coli B185]
Length = 388
Score = 34.8 bits (79), Expect = 8.8, Method: Composition-based stats.
Identities = 16/107 (14%), Positives = 38/107 (35%), Gaps = 4/107 (3%)
Query: 28 ITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHNIGLAAI 87
I L F +L+ I+ + + LR++ FEQ L + N +A
Sbjct: 23 IIGL-FFGLLTVFAILFRFFIYRRLRKETAAFEQAV---SELVQRERDFNETVNAAIARG 78
Query: 88 FMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSF 134
+ + ++ + + R++D A + + + ++
Sbjct: 79 IRQEKEQLARRREEFHTTRKKASRAMQRIVDSAWKFKAKTLLAGVTI 125
>gi|196033418|ref|ZP_03100830.1| phage tail tape measure protein, family [Bacillus cereus W]
gi|195993852|gb|EDX57808.1| phage tail tape measure protein, family [Bacillus cereus W]
Length = 1247
Score = 34.8 bits (79), Expect = 8.8, Method: Composition-based stats.
Identities = 25/145 (17%), Positives = 58/145 (40%), Gaps = 15/145 (10%)
Query: 66 GQSLETVCKSL-KNHHNIGLAAIFMS-AMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAR 123
+L K L ++ L +F S A+ +GA+ + D + ++ +A
Sbjct: 503 SGTLHESMKDLTDQQRSMALETLFGSDAVRGATILFKEGAKGVNEMWDSMSKVTAADVAA 562
Query: 124 -ELEEITEKLSFLGSMSSA---------GLLVGIL-GAVLGMMGFFQSIAGYYSNNVVSI 172
+++ + +L+ L S S +V + + ++ F S+ G +
Sbjct: 563 TKIDTLKGRLTLLDSAFSTMKKTIGDALAPVVSVFVAGLQKLVDGFNSLPGPVQKAIAIT 622
Query: 173 PGIIESL--ISILLGLCVSIPSSIA 195
GI+ +L ++ +G+ ++ IA
Sbjct: 623 GGIVLALTAVATAIGVVLAAFGMIA 647
>gi|170741397|ref|YP_001770052.1| chemotaxis MotA protein [Methylobacterium sp. 4-46]
gi|168195671|gb|ACA17618.1| chemotaxis MotA protein [Methylobacterium sp. 4-46]
Length = 290
Score = 34.8 bits (79), Expect = 8.8, Method: Composition-based stats.
Identities = 17/74 (22%), Positives = 34/74 (45%), Gaps = 3/74 (4%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI 172
I+ +MD I + + + + +++ A +GI+ AVLG++ ++ V
Sbjct: 143 IEALMDEEIGTHKRDALKPYASISTVAEALPALGIVAAVLGIVNAMGAL---DQPPHVLG 199
Query: 173 PGIIESLISILLGL 186
I +LI L G+
Sbjct: 200 HLIGAALIGTLGGI 213
>gi|77020143|ref|YP_338196.1| tail tape measure protein [Bacillus phage Gamma]
gi|77020197|ref|YP_338145.1| tail tape measure protein [Bacillus phage Cherry]
gi|85701392|ref|YP_459977.1| putative phage tail tape measure protein [Bacillus phage WBeta]
gi|89152491|ref|YP_512322.1| tail length tape measure protein [Bacillus phage Fah]
gi|76445714|gb|ABA42704.1| tail length tape measure protein [Bacillus phage Fah]
gi|76563987|gb|ABA46377.1| tail tape measure protein [Bacillus phage Cherry]
gi|76564045|gb|ABA46433.1| tail tape measure protein [Bacillus phage Gamma]
gi|76564135|gb|ABA46522.1| tail tape measure protein [Bacillus phage Gamma]
gi|81097482|gb|ABB55425.1| putative tail tape measure protein [Bacillus phage Gamma]
gi|83658628|gb|ABC40412.1| putative phage tail tape measure protein [Bacillus phage WBeta]
gi|83658682|gb|ABC40465.1| putative phage tail tape measure protein [Bacillus phage Gamma
isolate d'Herelle]
Length = 1283
Score = 34.8 bits (79), Expect = 8.8, Method: Composition-based stats.
Identities = 25/145 (17%), Positives = 58/145 (40%), Gaps = 15/145 (10%)
Query: 66 GQSLETVCKSL-KNHHNIGLAAIFMS-AMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAR 123
+L K L ++ L +F S A+ +GA+ + D + ++ +A
Sbjct: 539 SGTLHESMKDLTDQQRSMALETLFGSDAVRGATILFKEGAKGVNEMWDSMSKVTAADVAA 598
Query: 124 -ELEEITEKLSFLGSMSSA---------GLLVGIL-GAVLGMMGFFQSIAGYYSNNVVSI 172
+++ + +L+ L S S +V + + ++ F S+ G +
Sbjct: 599 TKIDTLKGRLTLLDSAFSTMKKTIGDALAPVVSVFVAGLQKLVDGFNSLPGPVQKAIAIT 658
Query: 173 PGIIESL--ISILLGLCVSIPSSIA 195
GI+ +L ++ +G+ ++ IA
Sbjct: 659 GGIVLALTAVATAIGVVLAAFGMIA 683
>gi|77464675|ref|YP_354179.1| RNA polymerase sigma factor RpoE [Rhodobacter sphaeroides 2.4.1]
gi|21245137|gb|AAB17906.2| RpoE [Rhodobacter sphaeroides]
gi|77389093|gb|ABA80278.1| sigma24, RpoE [Rhodobacter sphaeroides 2.4.1]
Length = 181
Score = 34.8 bits (79), Expect = 8.9, Method: Composition-based stats.
Identities = 21/108 (19%), Positives = 34/108 (31%), Gaps = 15/108 (13%)
Query: 34 FSILSWSVIIQKSVNFITLRR-QFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAM 92
S+ +W I ++ LR+ + E E LFW + A
Sbjct: 74 ASVATWIFTIARNRRIDGLRKDRQPEPEDLFW-------------GPDSEPDQADVYEMQ 120
Query: 93 SEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSS 140
E + AR P + I+R + L LG++ S
Sbjct: 121 QENARLGRAIARLPEAQRALIERAFFGDLTHRELAAETGLP-LGTIKS 167
>gi|148262851|ref|YP_001229557.1| biopolymer transport protein-like protein [Geobacter uraniireducens
Rf4]
gi|146396351|gb|ABQ24984.1| outer membrane transport energization protein ExbB [Geobacter
uraniireducens Rf4]
Length = 198
Score = 34.8 bits (79), Expect = 8.9, Method: Composition-based stats.
Identities = 14/102 (13%), Positives = 42/102 (41%), Gaps = 2/102 (1%)
Query: 94 EWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLG 153
E ++ A + + +D M+ + + + L + + G +G++G ++
Sbjct: 56 ERYRARLTAALADAPEKSNLDIAMERLLQTAELALVKSLDKIRFVIRVGPALGLMGTLIP 115
Query: 154 MMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIA 195
M S+A + ++ + ++++GL S+ + +
Sbjct: 116 MGISLSSLA--QGDMPKMAGSMVTAFTTVVVGLACSVVAYLM 155
>gi|299069797|emb|CBJ41077.1| MotA: chemotaxis protein; proton conductor component of flagella
motor, torque generator [Ralstonia solanacearum CMR15]
Length = 286
Score = 34.8 bits (79), Expect = 9.0, Method: Composition-based stats.
Identities = 15/77 (19%), Positives = 30/77 (38%), Gaps = 3/77 (3%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI 172
I+ +MD I E + + + A GI+ AV+G++ +
Sbjct: 143 IEALMDQEIDTHHHEAEQPARIITKVGDAMPAFGIVAAVMGVVHT---MGSVGLPPAELG 199
Query: 173 PGIIESLISILLGLCVS 189
I +L+ LG+ ++
Sbjct: 200 KLIASALVGTFLGILLA 216
>gi|17549630|ref|NP_522970.1| flagellar motor protein MotA [Ralstonia solanacearum GMI1000]
gi|83747600|ref|ZP_00944637.1| Probable chemotaxis motA protein [Ralstonia solanacearum UW551]
gi|207725017|ref|YP_002255414.1| chemotaxis protein (motility protein a) [Ralstonia solanacearum
MolK2]
gi|207738643|ref|YP_002257036.1| chemotaxis protein (motility protein a) [Ralstonia solanacearum
IPO1609]
gi|300697988|ref|YP_003748649.1| MotA: chemotaxis protein; proton conductor component of flagella
motor, torque generator [Ralstonia solanacearum
CFBP2957]
gi|17431884|emb|CAD18562.1| probable chemotaxis (motility protein a) transmembrane [Ralstonia
solanacearum GMI1000]
gi|83725780|gb|EAP72921.1| Probable chemotaxis motA protein [Ralstonia solanacearum UW551]
gi|206590246|emb|CAQ37207.1| chemotaxis protein (motility protein a) [Ralstonia solanacearum
MolK2]
gi|206592011|emb|CAQ58917.1| chemotaxis protein (motility protein a) [Ralstonia solanacearum
IPO1609]
gi|299074712|emb|CBJ54270.1| MotA: chemotaxis protein; proton conductor component of flagella
motor, torque generator [Ralstonia solanacearum
CFBP2957]
Length = 286
Score = 34.8 bits (79), Expect = 9.0, Method: Composition-based stats.
Identities = 15/77 (19%), Positives = 30/77 (38%), Gaps = 3/77 (3%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI 172
I+ +MD I E + + + A GI+ AV+G++ +
Sbjct: 143 IEALMDQEIDTHHHEAEQPARIITKVGDAMPAFGIVAAVMGVVHT---MGSVGLPPAELG 199
Query: 173 PGIIESLISILLGLCVS 189
I +L+ LG+ ++
Sbjct: 200 KLIASALVGTFLGILLA 216
>gi|310764848|gb|ADP09798.1| Flagellar motor protein MotA [Erwinia sp. Ejp617]
Length = 298
Score = 34.8 bits (79), Expect = 9.2, Method: Composition-based stats.
Identities = 16/79 (20%), Positives = 35/79 (44%), Gaps = 3/79 (3%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+I+ +MD I EE+ L ++ A GI+ AV+G++ + + +
Sbjct: 141 HQIEDLMDEEIETCQEELEVPAQSLNTVGDAFPAFGIVAAVMGVVNALGAADRPAAELGM 200
Query: 171 SIPGIIESLISILLGLCVS 189
I +++ LG+ ++
Sbjct: 201 L---IAHAMVGTFLGILIA 216
>gi|292489121|ref|YP_003532008.1| chemotaxis protein MotA [Erwinia amylovora CFBP1430]
gi|292900240|ref|YP_003539609.1| motility protein A [Erwinia amylovora ATCC 49946]
gi|291200088|emb|CBJ47214.1| chemotaxis protein (motility protein A) [Erwinia amylovora ATCC
49946]
gi|291554555|emb|CBA22157.1| Chemotaxis protein motA (Motility protein A) [Erwinia amylovora
CFBP1430]
gi|312173279|emb|CBX81534.1| Chemotaxis protein motA (Motility protein A) [Erwinia amylovora
ATCC BAA-2158]
Length = 298
Score = 34.8 bits (79), Expect = 9.3, Method: Composition-based stats.
Identities = 16/79 (20%), Positives = 35/79 (44%), Gaps = 3/79 (3%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+I+ +MD I EE+ L ++ A GI+ AV+G++ + + +
Sbjct: 141 HQIEDLMDEEIETCQEELEVPSQSLNTVGDAFPAFGIVAAVMGVVNALGAADRPAAELGM 200
Query: 171 SIPGIIESLISILLGLCVS 189
I +++ LG+ ++
Sbjct: 201 L---IAHAMVGTFLGILIA 216
>gi|328953906|ref|YP_004371240.1| MotA/TolQ/ExbB proton channel [Desulfobacca acetoxidans DSM 11109]
gi|328454230|gb|AEB10059.1| MotA/TolQ/ExbB proton channel [Desulfobacca acetoxidans DSM 11109]
Length = 201
Score = 34.8 bits (79), Expect = 9.4, Method: Composition-based stats.
Identities = 16/136 (11%), Positives = 49/136 (36%), Gaps = 6/136 (4%)
Query: 95 WKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGM 154
++ + + +D ++ + E+ + L + G VG++G ++ M
Sbjct: 55 LRRYRTMLDSEVLTLSANLDLELEKHLQEFELELIKGLDKVRFAIRVGPAVGLMGTLIPM 114
Query: 155 MGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFA 214
++A + ++ + + ++GL + + + + + +ME
Sbjct: 115 GISLAALA--QGDMPKMAGSMVTAFTATVVGLACGVAAYLMSLIKEKWVRADMREMEY-- 170
Query: 215 NEFSAILSRQTEGNIS 230
+ + RQ + S
Sbjct: 171 --LTELRLRQAKAQRS 184
>gi|228962736|ref|ZP_04124013.1| Phage tail tape measure protein, TP901 [Bacillus thuringiensis
serovar pakistani str. T13001]
gi|228796944|gb|EEM44277.1| Phage tail tape measure protein, TP901 [Bacillus thuringiensis
serovar pakistani str. T13001]
Length = 872
Score = 34.8 bits (79), Expect = 9.4, Method: Composition-based stats.
Identities = 24/145 (16%), Positives = 57/145 (39%), Gaps = 15/145 (10%)
Query: 66 GQSLETVCKSL-KNHHNIGLAAIFMS-AMSEWKKSCDKGARSPIGIQDRIDRMMDVAIAR 123
+L K L ++ L +F S A+ +GA+ + D + ++ +A
Sbjct: 128 SGTLHESMKDLTDQQRSMALETLFGSDAVRGATILFKEGAKGVNEMWDSMSKVTAADVAA 187
Query: 124 -ELEEITEKLSFLGSMSSA---------GLLVGIL-GAVLGMMGFFQSIAGYYSNNVVSI 172
+++ + +++ L S S +V + ++ F S+ G +
Sbjct: 188 TKIDTLQGRITLLDSAFSTMKKTIGDALAPVVSAFVAGLQKLVDGFNSLPGPVQKAIAIT 247
Query: 173 PGIIESL--ISILLGLCVSIPSSIA 195
GI+ +L ++ +G+ ++ IA
Sbjct: 248 GGIVLALTAVATAVGVVLAAFGMIA 272
>gi|259907646|ref|YP_002648002.1| Flagellar motor protein MotA [Erwinia pyrifoliae Ep1/96]
gi|224963268|emb|CAX54752.1| Flagellar motor protein MotA [Erwinia pyrifoliae Ep1/96]
gi|283477489|emb|CAY73405.1| Chemotaxis protein motA (Motility protein A) [Erwinia pyrifoliae
DSM 12163]
Length = 298
Score = 34.8 bits (79), Expect = 9.4, Method: Composition-based stats.
Identities = 16/79 (20%), Positives = 35/79 (44%), Gaps = 3/79 (3%)
Query: 111 DRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVV 170
+I+ +MD I EE+ L ++ A GI+ AV+G++ + + +
Sbjct: 141 HQIEDLMDEEIETCQEELEVPAQSLNTVGDAFPAFGIVAAVMGVVNALGAADRPAAELGM 200
Query: 171 SIPGIIESLISILLGLCVS 189
I +++ LG+ ++
Sbjct: 201 L---IAHAMVGTFLGILIA 216
>gi|126417354|gb|ABO13879.1| MotA [Ralstonia solanacearum]
Length = 286
Score = 34.8 bits (79), Expect = 9.4, Method: Composition-based stats.
Identities = 15/77 (19%), Positives = 30/77 (38%), Gaps = 3/77 (3%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI 172
I+ +MD I E + + + A GI+ AV+G++ +
Sbjct: 143 IEALMDQEIDTHHHEAEQPARIITKVGDAMPAFGIVAAVMGVVHT---MGSVGLPPAELG 199
Query: 173 PGIIESLISILLGLCVS 189
I +L+ LG+ ++
Sbjct: 200 KLIASALVGTFLGILLA 216
>gi|83815022|ref|YP_446692.1| chemotaxis motA protein [Salinibacter ruber DSM 13855]
gi|294508628|ref|YP_003572687.1| chemotaxis motA protein [Salinibacter ruber M8]
gi|83756416|gb|ABC44529.1| chemotaxis motA protein [Salinibacter ruber DSM 13855]
gi|294344957|emb|CBH25735.1| Chemotaxis motA protein [Salinibacter ruber M8]
Length = 273
Score = 34.8 bits (79), Expect = 9.4, Method: Composition-based stats.
Identities = 21/151 (13%), Positives = 58/151 (38%), Gaps = 10/151 (6%)
Query: 67 QSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQ--DRIDRMMDVAIARE 124
+ L+ + + G+ A+ + + G + D I M+D IA
Sbjct: 75 RRLDQITNMARTARREGVLALDRHIDDVDDELLEFGLEMAVDGMGEDEIAGMLDQRIAEM 134
Query: 125 LEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILL 184
+ F + G++G ++G++ ++ + G+ +L++
Sbjct: 135 KGKRQLVADFFTQAGTYAPAFGMIGTLIGLIQMLNNL----DDPSKIGSGMATALVTTFY 190
Query: 185 GLCVSIPSSIAYNKFIEDSKKFAMQMEGFAN 215
G ++ +++A+ + ++K ++ G A+
Sbjct: 191 G---ALLANLAFLPLGDRARK-QNELRGKAH 217
>gi|309778973|ref|ZP_07673743.1| chemotaxis protein MotA [Ralstonia sp. 5_7_47FAA]
gi|308922320|gb|EFP67947.1| chemotaxis protein MotA [Ralstonia sp. 5_7_47FAA]
Length = 286
Score = 34.8 bits (79), Expect = 9.4, Method: Composition-based stats.
Identities = 15/77 (19%), Positives = 30/77 (38%), Gaps = 3/77 (3%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI 172
I+ +MD I E + + + A GI+ AV+G++ +
Sbjct: 143 IEALMDQEIDTHHHEAEQPARIITKVGDAMPAFGIVAAVMGVVHT---MGSVGLPPAELG 199
Query: 173 PGIIESLISILLGLCVS 189
I +L+ LG+ ++
Sbjct: 200 KLIASALVGTFLGILLA 216
>gi|188579890|ref|YP_001923335.1| chemotaxis MotA protein [Methylobacterium populi BJ001]
gi|179343388|gb|ACB78800.1| chemotaxis MotA protein [Methylobacterium populi BJ001]
Length = 291
Score = 34.8 bits (79), Expect = 9.5, Method: Composition-based stats.
Identities = 14/77 (18%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI 172
I+ +M+ I + + + + +++ A +GI+ AVLG++ ++ + +
Sbjct: 143 IEALMEEEIGTHKKYRLKPYAAINTVAEALPALGIVAAVLGIVKAMGAL---DQSPQILG 199
Query: 173 PGIIESLISILLGLCVS 189
I +L+ G+ S
Sbjct: 200 GLIGAALVGTFFGVFAS 216
>gi|302343735|ref|YP_003808264.1| MotA/TolQ/ExbB proton channel [Desulfarculus baarsii DSM 2075]
gi|301640348|gb|ADK85670.1| MotA/TolQ/ExbB proton channel [Desulfarculus baarsii DSM 2075]
Length = 254
Score = 34.8 bits (79), Expect = 9.6, Method: Composition-based stats.
Identities = 11/77 (14%), Positives = 33/77 (42%), Gaps = 4/77 (5%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI 172
I +++ I E +M + +G++G ++G++ Q++ S+
Sbjct: 123 IKEILETEIDYVGERHRLGAEIFMTMGTFAPAMGMIGTLIGLVQMLQNM----SDPSSIG 178
Query: 173 PGIIESLISILLGLCVS 189
P + ++++ G ++
Sbjct: 179 PAMAVAILTTFYGSVMA 195
>gi|294013082|ref|YP_003546542.1| chemotaxis MotA protein [Sphingobium japonicum UT26S]
gi|292676412|dbj|BAI97930.1| chemotaxis MotA protein [Sphingobium japonicum UT26S]
Length = 228
Score = 34.8 bits (79), Expect = 9.7, Method: Composition-based stats.
Identities = 10/53 (18%), Positives = 28/53 (52%), Gaps = 4/53 (7%)
Query: 137 SMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVS 189
S++ A +G+ G ++G++G F ++ + P + +L++ G+ ++
Sbjct: 131 SIADAAPALGMAGTIIGLVGMFAAM----DDPAALGPSMALALLTTFYGVVIA 179
>gi|254497490|ref|ZP_05110283.1| flagellar motor protein [Legionella drancourtii LLAP12]
gi|254353305|gb|EET12047.1| flagellar motor protein [Legionella drancourtii LLAP12]
Length = 258
Score = 34.8 bits (79), Expect = 9.7, Method: Composition-based stats.
Identities = 15/77 (19%), Positives = 32/77 (41%), Gaps = 8/77 (10%)
Query: 117 MDVAIARELEEITEK----LSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI 172
+ + E++ + SM +GILGAVLG++ + +A
Sbjct: 124 IRQVLEAEIDRVESHDLHAAQVFESMGGYSPTIGILGAVLGLIQVMRHLA----EPSELG 179
Query: 173 PGIIESLISILLGLCVS 189
GI + ++ + G+ ++
Sbjct: 180 VGIAVAFVATVYGVGMA 196
>gi|219849567|ref|YP_002464000.1| heat-inducible transcription repressor HrcA [Chloroflexus aggregans
DSM 9485]
gi|254802071|sp|B8G4T8|HRCA_CHLAD RecName: Full=Heat-inducible transcription repressor hrcA
gi|219543826|gb|ACL25564.1| heat-inducible transcription repressor HrcA [Chloroflexus aggregans
DSM 9485]
Length = 376
Score = 34.8 bits (79), Expect = 9.8, Method: Composition-based stats.
Identities = 35/193 (18%), Positives = 65/193 (33%), Gaps = 18/193 (9%)
Query: 52 LRRQFREFEQLFWSGQ--SLETVCKSLK------NHHNIGLAAIFMSAMSEWKKSCD--- 100
LRR L +E + + + GL + + AM +++
Sbjct: 177 LRRAAGLVSDLLADATLTRVEELATAATFNGIPLSDFERGLVDLVVRAMIAFEEQAQEQI 236
Query: 101 --KGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFF 158
G + + R +E + L L S G L+ A G+
Sbjct: 237 YSDGLLEMLSQPEFSPASGRDDAERVIERMRRTLEILKSGRGLGPLIPQALASGGVQVII 296
Query: 159 QSIAGYYSN---NVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFAN 215
G + +V+ +E +I+ +LG+ P+ +AY + I + A M
Sbjct: 297 GGEHGEDTMRDYSVILARYGVEGVIAGVLGVIG--PTRMAYPRSISTVRYIASLMNNLLA 354
Query: 216 EFSAILSRQTEGN 228
E + +R +EG
Sbjct: 355 ELYNVQARPSEGE 367
>gi|28869188|ref|NP_791807.1| chemotaxis motA protein [Pseudomonas syringae pv. tomato str.
DC3000]
gi|213967535|ref|ZP_03395683.1| chemotaxis motA protein [Pseudomonas syringae pv. tomato T1]
gi|301382872|ref|ZP_07231290.1| flagellar motor protein [Pseudomonas syringae pv. tomato Max13]
gi|302062802|ref|ZP_07254343.1| flagellar motor protein [Pseudomonas syringae pv. tomato K40]
gi|302131301|ref|ZP_07257291.1| flagellar motor protein [Pseudomonas syringae pv. tomato NCPPB
1108]
gi|28852428|gb|AAO55502.1| chemotaxis motA protein [Pseudomonas syringae pv. tomato str.
DC3000]
gi|213927836|gb|EEB61383.1| chemotaxis motA protein [Pseudomonas syringae pv. tomato T1]
gi|330876043|gb|EGH10192.1| flagellar motor protein [Pseudomonas syringae pv. morsprunorum str.
M302280PT]
gi|330964669|gb|EGH64929.1| flagellar motor protein [Pseudomonas syringae pv. actinidiae str.
M302091]
gi|331016980|gb|EGH97036.1| flagellar motor protein [Pseudomonas syringae pv. lachrymans str.
M302278PT]
Length = 246
Score = 34.8 bits (79), Expect = 9.8, Method: Composition-based stats.
Identities = 13/56 (23%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
Query: 134 FLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVS 189
SM VGI+GAV+G++ ++A + GI + ++ + G+ ++
Sbjct: 145 VFESMGGYAPTVGIIGAVMGLIHVMGNLA----DPSQLGSGIAVAFVATIYGVAMA 196
>gi|288942613|ref|YP_003444853.1| MotA/TolQ/ExbB proton channel [Allochromatium vinosum DSM 180]
gi|288897985|gb|ADC63821.1| MotA/TolQ/ExbB proton channel [Allochromatium vinosum DSM 180]
Length = 247
Score = 34.8 bits (79), Expect = 9.9, Method: Composition-based stats.
Identities = 16/87 (18%), Positives = 39/87 (44%), Gaps = 8/87 (9%)
Query: 103 ARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIA 162
P ++ ++ +D + + +L+ SM +GI+GAV+G+M Q++
Sbjct: 118 GAEPQTLRQILESDLDNSESFDLQ----GARVFESMGVYSPTLGIIGAVMGLMAVMQNL- 172
Query: 163 GYYSNNVVSIPGIIESLISILLGLCVS 189
+ GI + ++ + G+ ++
Sbjct: 173 ---TEPSKLGQGIAAAFVATIYGVGLA 196
>gi|170737029|ref|YP_001778289.1| MotA/TolQ/ExbB proton channel [Burkholderia cenocepacia MC0-3]
gi|169819217|gb|ACA93799.1| MotA/TolQ/ExbB proton channel [Burkholderia cenocepacia MC0-3]
Length = 290
Score = 34.8 bits (79), Expect = 9.9, Method: Composition-based stats.
Identities = 15/75 (20%), Positives = 33/75 (44%), Gaps = 1/75 (1%)
Query: 113 IDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSI 172
++ +++ + E I L +S A GI+ AVLG++ + G ++
Sbjct: 143 LESVLEQELVAIQENIELPSRSLKKISEAMPGFGIVAAVLGVVIAMGGL-GDGASAAELA 201
Query: 173 PGIIESLISILLGLC 187
+ ++I L+G+
Sbjct: 202 ENVAAAMIGTLIGIF 216
>gi|27363787|ref|NP_759315.1| flagellar motor protein PomA [Vibrio vulnificus CMCP6]
gi|37679055|ref|NP_933664.1| flagellar motor protein PomA [Vibrio vulnificus YJ016]
gi|320157196|ref|YP_004189575.1| flagellar motor rotation protein MotA [Vibrio vulnificus MO6-24/O]
gi|27359904|gb|AAO08842.1| Flagellar motor rotation protein motA [Vibrio vulnificus CMCP6]
gi|37197797|dbj|BAC93635.1| flagellar motor component [Vibrio vulnificus YJ016]
gi|319932508|gb|ADV87372.1| flagellar motor rotation protein MotA [Vibrio vulnificus MO6-24/O]
Length = 253
Score = 34.8 bits (79), Expect = 9.9, Method: Composition-based stats.
Identities = 27/190 (14%), Positives = 64/190 (33%), Gaps = 21/190 (11%)
Query: 5 GLAIMDISIFALFMQMGLA----VKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60
GLA + + A+ + + V I+ + SI + F + + F
Sbjct: 12 GLAFV---VMAMILGGSIMMFVDVTSILIV-VGGSIFVVLMKFTMGQFFGAAKIAGKAF- 66
Query: 61 QLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSCDKGARSPIGIQDR-----IDR 115
+ E + + + F+ A+ E + S + + D +
Sbjct: 67 --MFKADEPEDLIAKIVEMADAARKGGFL-ALEEMEISNSFMQKGIDLLVDGHDADVVRA 123
Query: 116 MMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGI 175
+ IA E T+ + +G++G ++G++ ++ + P +
Sbjct: 124 ALQKDIALTDERHTQGTGVFRAFGDVAPAMGMIGTLVGLVAMLSNM----DDPKSIGPAM 179
Query: 176 IESLISILLG 185
+L++ L G
Sbjct: 180 AVALLTTLYG 189
>gi|126463515|ref|YP_001044629.1| RNA polymerase sigma factor RpoE [Rhodobacter sphaeroides ATCC
17029]
gi|126105179|gb|ABN77857.1| RNA polymerase, sigma-24 subunit, ECF subfamily [Rhodobacter
sphaeroides ATCC 17029]
Length = 168
Score = 34.8 bits (79), Expect = 9.9, Method: Composition-based stats.
Identities = 21/108 (19%), Positives = 34/108 (31%), Gaps = 15/108 (13%)
Query: 34 FSILSWSVIIQKSVNFITLRR-QFREFEQLFWSGQSLETVCKSLKNHHNIGLAAIFMSAM 92
S+ +W I ++ LR+ + E E LFW + A
Sbjct: 61 ASVATWIFTIARNRRIDGLRKDRQPEPEDLFW-------------GPDSEPDQADVYEMQ 107
Query: 93 SEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSS 140
E + AR P + I+R + L LG++ S
Sbjct: 108 QENARLGRAIARLPEAQRALIERAFFGDLTHRELAAETGLP-LGTIKS 154
>gi|254418967|ref|ZP_05032691.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Brevundimonas sp. BAL3]
gi|196185144|gb|EDX80120.1| transporter, MotA/TolQ/ExbB proton channel family protein
[Brevundimonas sp. BAL3]
Length = 288
Score = 34.8 bits (79), Expect = 9.9, Method: Composition-based stats.
Identities = 21/134 (15%), Positives = 48/134 (35%), Gaps = 10/134 (7%)
Query: 97 KSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMG 156
+ P ++D +++ ++ L+ L +++ A +GI+ AVLG++
Sbjct: 133 RMMTMNLEDPHQVEDAMEKQLEKHHHEHLDNAHA----LQNLADALPALGIVAAVLGVIK 188
Query: 157 FFQSIAGYYSNNVVSIPGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANE 216
SI V I +L+ +G+ ++ F + +
Sbjct: 189 TMGSIT---EPPEVLGGMIGGALVGTFMGVFLAYGLV---GPFAARLTSIINEEAAYYKM 242
Query: 217 FSAILSRQTEGNIS 230
++L GN +
Sbjct: 243 IQSVLIAHLHGNAA 256
Database: nr
Posted date: May 22, 2011 12:22 AM
Number of letters in database: 999,999,966
Number of sequences in database: 2,987,313
Database: /data/usr2/db/fasta/nr.01
Posted date: May 22, 2011 12:30 AM
Number of letters in database: 999,999,796
Number of sequences in database: 2,903,041
Database: /data/usr2/db/fasta/nr.02
Posted date: May 22, 2011 12:36 AM
Number of letters in database: 999,999,281
Number of sequences in database: 2,904,016
Database: /data/usr2/db/fasta/nr.03
Posted date: May 22, 2011 12:41 AM
Number of letters in database: 999,999,960
Number of sequences in database: 2,935,328
Database: /data/usr2/db/fasta/nr.04
Posted date: May 22, 2011 12:46 AM
Number of letters in database: 842,794,627
Number of sequences in database: 2,394,679
Lambda K H
0.314 0.160 0.463
Lambda K H
0.267 0.0489 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,603,794,961
Number of Sequences: 14124377
Number of extensions: 223480514
Number of successful extensions: 1129897
Number of sequences better than 10.0: 5562
Number of HSP's better than 10.0 without gapping: 5082
Number of HSP's successfully gapped in prelim test: 3360
Number of HSP's that attempted gapping in prelim test: 1113698
Number of HSP's gapped (non-prelim): 9505
length of query: 230
length of database: 4,842,793,630
effective HSP length: 134
effective length of query: 96
effective length of database: 2,950,127,112
effective search space: 283212202752
effective search space used: 283212202752
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (20.8 bits)
S2: 79 (34.8 bits)