RPS-BLAST 2.2.22 [Sep-27-2009] Database: scop70_1_75 13,730 sequences; 2,407,596 total letters Searching..................................................done Query= gi|254780551|ref|YP_003064964.1| tolQ protein [Candidatus Liberibacter asiaticus str. psy62] (230 letters) >d1znca_ b.74.1.1 (A:) Carbonic anhydrase {Human (Homo sapiens), isozyme IV [TaxId: 9606]} Length = 262 Score = 25.6 bits (55), Expect = 3.8 Identities = 7/20 (35%), Positives = 10/20 (50%) Query: 93 SEWKKSCDKGARSPIGIQDR 112 +W +C K +SPI I Sbjct: 18 VKWGGNCQKDRQSPINIVTT 37 >d1dhsa_ c.31.1.1 (A:) Deoxyhypusine synthase, DHS {Human (Homo sapiens) [TaxId: 9606]} Length = 361 Score = 25.6 bits (56), Expect = 4.1 Identities = 14/63 (22%), Positives = 21/63 (33%), Gaps = 8/63 (12%) Query: 81 NIGLAAIFMSAMSEWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSS 140 N G A ++AM E K D R L T L + ++ S Sbjct: 50 NFGRAVQQVNAMIEKKLEPLSQ--------DEDQHADLTQSRRPLTSCTIFLGYTSNLIS 101 Query: 141 AGL 143 +G+ Sbjct: 102 SGI 104 >d1igwa_ c.1.12.7 (A:) Isocitrate lyase {Escherichia coli [TaxId: 562]} Length = 416 Score = 24.6 bits (53), Expect = 7.9 Identities = 19/125 (15%), Positives = 37/125 (29%), Gaps = 3/125 (2%) Query: 1 MNNYGLAIMDISIFALFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFE 60 N D S++ + V+ I + WS I+ + Sbjct: 98 ANLAASMYPDQSLYPA-NSVPAVVERINNTFRRADQIQWSAGIEPGDPRYVDYFLPIVAD 156 Query: 61 QLFWSGQSLETVCKSLKNHHNIGLAAIFMSAMSEWKKSC-DKGARSPIGIQDRIDRMMDV 119 G L + +K G AA+ K C G + + Q+ I +++ Sbjct: 157 AEAGFGGVLN-AFELMKAMIEAGAAAVHFEDQLASVKKCGHMGGKVLVPTQEAIQKLVAA 215 Query: 120 AIARE 124 + + Sbjct: 216 RLCAD 220 Database: scop70_1_75 Posted date: Mar 27, 2010 6:21 PM Number of letters in database: 2,407,596 Number of sequences in database: 13,730 Lambda K H 0.325 0.138 0.394 Gapped Lambda K H 0.267 0.0687 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 13730 Number of Hits to DB: 804,797 Number of extensions: 35962 Number of successful extensions: 111 Number of sequences better than 10.0: 1 Number of HSP's gapped: 110 Number of HSP's successfully gapped: 12 Length of query: 230 Length of database: 2,407,596 Length adjustment: 82 Effective length of query: 148 Effective length of database: 1,281,736 Effective search space: 189696928 Effective search space used: 189696928 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.6 bits) S2: 51 (23.5 bits)