HHsearch alignment for GI: 254780552 and conserved domain: CHL00181
>CHL00181 cbbX CbbX; Provisional.
Probab=99.93 E-value=2.2e-25 Score=174.72 Aligned_cols=187 Identities=25% Similarity=0.249 Sum_probs=126.6
Q ss_pred CHH-HHCCHHHHHHHHHHH---HHHHHH---CC----CCCCCEEEECCCCCCHHHHHHHHHHHC---CC----CCCCCCC
Q ss_conf 877-823979999999999---998661---46----776707997378855778999999861---89----8531257
Q gi|254780552|r 26 TLE-EFTGQVEACSNLKVF---IEAAKA---RA----EALDHVLFVGPPGLGKTTLAQVVAREL---GV----NFRSTSG 87 (334)
Q Consensus 26 ~l~-dviGQ~~~~~~l~~~---i~a~~~---~~----~~~~h~Lf~GPpG~GKTtlA~iiA~~l---~~----~~~~~s~ 87 (334)
T Consensus 20 eLd~eliGL~~VK~~v~~l~~~~~~~~~R~~~Gl~~~~~s~h~vF~GnPGTGKTTVARl~a~il~~lG~L~~g~vve~~r 99 (287)
T CHL00181 20 ELDEELIGLVPVKTRIREIAALLLVDRLRKNLGLVSSSPGLHMSFTGSPGTGKTTVALKMADILYRLGYIKKGHLITVTR 99 (287)
T ss_pred HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECH
T ss_conf 99886469699999999999999999999987999888765388878998679999999999999869955895899535
Q ss_pred CCCC------CHHHHHHHHHHHHCCCHHHHHHHHHCC---------HHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCC
Q ss_conf 6443------346766666641016378887576169---------8999999998634751002567876520004667
Q gi|254780552|r 88 PVIA------KAGDLAALLTNLEDRDVLFIDEIHRLS---------IIVEEILYPAMEDFQLDLMVGEGPSARSVKINLS 152 (334)
Q Consensus 88 ~~~~------~~~dl~~~~~~~~~~~vlfiDEihrl~---------~~~q~~Ll~~mE~~~i~i~~~~~~~a~~~~~~~~ 152 (334)
T Consensus 100 ~dLvg~yvG~Ta~kt~~~i~~-a~GGVLfIDEAY~L~~~~~~~dfg~eaidtLl~~me~~~~------------------ 160 (287)
T CHL00181 100 DDLVGQYIGHTAPKTKEVLKK-AMGGVLFIDEAYYLYKPDNERDYGAEAIEILLQVMENQRD------------------ 160 (287)
T ss_pred HHHCCCCCCCCHHHHHHHHHH-CCCCEEEEECHHHHCCCCCCCCCHHHHHHHHHHHHHHCCC------------------
T ss_conf 884163535216999999996-4598799824465357889998379999999999870799------------------
Q ss_pred CCEEEECCCCCC-----CCCHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHC----C----CCCCH
Q ss_conf 400552045543-----3554544201206732645479999987776541210111111123320----2----21015
Q gi|254780552|r 153 RFTLIAATTRVG-----LLTNPLQDRFGIPIRLNFYEIEDLKTIVQRGAKLTGLAVTDEAACEIAM----R----SRGTP 219 (334)
Q Consensus 153 ~f~lI~ATt~~~-----~l~~~l~sR~~~~~~~~~~~~~el~~il~~~~~~~~i~~~~~al~~ia~----~----s~Gd~ 219 (334)
T Consensus 161 ~lvvI~AGY~~eM~~fl~~NpGL~sRf~~~i~F~dYt~~EL~~I~~~~~~~~~~~l~~~a~~~l~~~~~~~~~~~~FGNa 240 (287)
T CHL00181 161 DLVVIFAGYKDRMDKFYESNPGLSSRVANHVDFPDYTPEELLQIAKMMLEEQQYQLTPEAEKVLLDYIKRRMEQPLFANA 240 (287)
T ss_pred CEEEEEECCHHHHHHHHHHCCCHHHHCCCEEECCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCH
T ss_conf 88999846789999999859047876887237798599999999999999869825879999999999985089998748
Q ss_pred HHHHHHHHHHHH
Q ss_conf 678877754333
Q gi|254780552|r 220 RIAGRLLRRVRD 231 (334)
Q Consensus 220 R~AlnlLe~v~d 231 (334)
T Consensus 241 R~vrnl~e~a~~ 252 (287)
T CHL00181 241 RSVRNAIDRARM 252 (287)
T ss_pred HHHHHHHHHHHH
T ss_conf 999999999999