HHsearch alignment for GI: 254780552 and conserved domain: COG0464
>COG0464 SpoVK ATPases of the AAA+ class [Posttranslational modification, protein turnover, chaperones].
Probab=98.02 E-value=1.9e-06 Score=58.96 Aligned_cols=107 Identities=35% Similarity=0.481 Sum_probs=64.4
Q ss_pred CCCCEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCC------HHHHHHHHHHHHC--CCHHHHHHHHHCCHHHHH-
Q ss_conf 7670799737885577899999986189853125764433------4676666664101--637888757616989999-
Q gi|254780552|r 53 ALDHVLFVGPPGLGKTTLAQVVARELGVNFRSTSGPVIAK------AGDLAALLTNLED--RDVLFIDEIHRLSIIVEE- 123 (334)
Q Consensus 53 ~~~h~Lf~GPpG~GKTtlA~iiA~~l~~~~~~~s~~~~~~------~~dl~~~~~~~~~--~~vlfiDEihrl~~~~q~- 123 (334)
T Consensus 17 ~~~~v~~~g~~~~~~t~~~~~~a~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ii~~d~~~~~~~~~~~~ 95 (494)
T COG0464 17 PPKGVLLHGPPGTGKTLLARALANE-GAEFLSINGPEILSKYVGESELRLRELFEEAEKLAPSIIFIDEIDALAPKRSSD 95 (494)
T ss_pred CCCCCCCCCCCCCCHHHHHHHHHHC-CCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCC
T ss_conf 6421000368876503665676512-541013565224322205108999999899986397636404433212344444
Q ss_pred ----------HHHHHHHCCCCCCCCCCCCCCCEEECCCCCCEEEECCCCCCCCCHHHH--HCCCCE
Q ss_conf ----------999986347510025678765200046674005520455433554544--201206
Q gi|254780552|r 124 ----------ILYPAMEDFQLDLMVGEGPSARSVKINLSRFTLIAATTRVGLLTNPLQ--DRFGIP 177 (334)
Q Consensus 124 ----------~Ll~~mE~~~i~i~~~~~~~a~~~~~~~~~f~lI~ATt~~~~l~~~l~--sR~~~~ 177 (334)
T Consensus 96 ~~~~~~~v~~~l~~~~d~~~----------------~~~-v~~~~~~~~~~~~~~a~~~~~~~~~~ 144 (494)
T COG0464 96 QGEVERRVVAQLLALMDGLK----------------RGQ-VIVIGATNRPDGLDPAKRRPGRFDRE 144 (494)
T ss_pred CCHHHHHHHHHHHHHHHCCC----------------CCC-EEEEECCCCCCCHHHHHHCCHHHHHH
T ss_conf 21045789998998764246----------------563-46741344532112777531376788