HHsearch alignment for GI: 254780552 and conserved domain: COG1067
>COG1067 LonB Predicted ATP-dependent protease [Posttranslational modification, protein turnover, chaperones].
Probab=98.95 E-value=7.1e-09 Score=73.78 Aligned_cols=233 Identities=24% Similarity=0.254 Sum_probs=141.6
Q ss_pred HHHCCCCCHHHHCCHHHHHHHHHHHHHH-HHHCCCCCCCEEEEC----CCCCCHHHHHHHHHHHC----------CCCCC
Q ss_conf 8750789877823979999999999998-661467767079973----78855778999999861----------89853
Q gi|254780552|r 19 ISLLRPRTLEEFTGQVEACSNLKVFIEA-AKARAEALDHVLFVG----PPGLGKTTLAQVVAREL----------GVNFR 83 (334)
Q Consensus 19 ~~~lRP~~l~dviGQ~~~~~~l~~~i~a-~~~~~~~~~h~Lf~G----PpG~GKTtlA~iiA~~l----------~~~~~ 83 (334)
T Consensus 95 ~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~iv~~~~~~~~~~~~~~~~~~~ 174 (647)
T COG1067 95 VPAGRPESFSELLGQKAEEKAEYLSYLILLALLGPIEQQIILYGYNALLPGVLYAVAARIVLYEAKILKRSAVSVPKNFV 174 (647)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
T ss_conf 66668722579998563678877776668876224666665404553462167789988887653125310333045565
Q ss_pred CCC----CCCCC----CH----HHH------------------HHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHCCC
Q ss_conf 125----76443----34----676------------------6666641016378887576169899999999863475
Q gi|254780552|r 84 STS----GPVIA----KA----GDL------------------AALLTNLEDRDVLFIDEIHRLSIIVEEILYPAMEDFQ 133 (334)
Q Consensus 84 ~~s----~~~~~----~~----~dl------------------~~~~~~~~~~~vlfiDEihrl~~~~q~~Ll~~mE~~~ 133 (334)
T Consensus 175 ~~~~~~~~p~v~a~~~~~~~LlG~Vr~~~~qG~l~~~~~~~i~pGaVHkAn-gGVLiIdei~lL~~~~~w~~LKa~~~k~ 253 (647)
T COG1067 175 ELSPLDGAPVVFATGAIADQLLGSVRHDPYQGGLGTTGHIRVKPGAVHKAN-GGVLIIDEIGLLAQPLQWKLLKALLDKE 253 (647)
T ss_pred HCCCCCCCCEEECCCCCHHHCCEEEEECCCCCCCCCCCCCCCCCCCCCCCC-CCEEEEEHHHHHCCHHHHHHHHHHHHCC
T ss_conf 402355896796687774653612777688876678886423676110125-8479997566328398999999998244
Q ss_pred CCCCCCCCCCCCEEECCC----CCCEEEECCCCC--CCCCHHHHHC---CCCEEECCCC---CHHHHHHHHH----HHHH
Q ss_conf 100256787652000466----740055204554--3355454420---1206732645---4799999877----7654
Q gi|254780552|r 134 LDLMVGEGPSARSVKINL----SRFTLIAATTRV--GLLTNPLQDR---FGIPIRLNFY---EIEDLKTIVQ----RGAK 197 (334)
Q Consensus 134 i~i~~~~~~~a~~~~~~~----~~f~lI~ATt~~--~~l~~~l~sR---~~~~~~~~~~---~~~el~~il~----~~~~ 197 (334)
T Consensus 254 ~~-~~~~~~~s~~~~v~~e~vP~d~klI~~Gn~~~l~~l~~~~~~r~~g~~y~ae~~~~m~~~~~nr~k~~~~~~q~v~~ 332 (647)
T COG1067 254 QP-IWGSSEPSSGAPVRPESVPLDLKLILAGNREDLEDLHEPDRSRIEGFGYEAEFEDTMPITDANRSKLVQFYVQELAR 332 (647)
T ss_pred CC-CCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHCCCCHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 56-65767402486157888556548994088999976553477788405568997688899868999999999999986
Q ss_pred HCC-CHHHHHHHHHHHCCCC---C-------CHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
Q ss_conf 121-0111111123320221---0-------156788777543334554158864277878765421
Q gi|254780552|r 198 LTG-LAVTDEAACEIAMRSR---G-------TPRIAGRLLRRVRDFAEVAHAKTITREIADAALLRL 253 (334)
Q Consensus 198 ~~~-i~~~~~al~~ia~~s~---G-------d~R~AlnlLe~v~d~a~~~~~~~i~~~~~~~~l~~~ 253 (334)
T Consensus 333 d~~ip~~~~~Av~~li~~a~R~Ag~~~~Ltl~~rdl~~lv~~A~~ia~~~~~~~I~ae~Ve~a~~~~ 399 (647)
T COG1067 333 DGNIPHLDKDAVEELIREAARRAGDQNKLTLRLRDLGNLVREAGDIAVSEGRKLITAEDVEEALQKR 399 (647)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
T ss_conf 2899988889999999999986165650214899999999986688853786647699999999874