HHsearch alignment for GI: 254780552 and conserved domain: COG1223
>COG1223 Predicted ATPase (AAA+ superfamily) [General function prediction only].
Probab=99.96 E-value=8.7e-29 Score=195.57 Aligned_cols=216 Identities=26% Similarity=0.358 Sum_probs=165.1
Q ss_pred HHCCCCCHHHHCCHHHHHHHHHHHHHHH----HHCCCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCC--CH
Q ss_conf 7507898778239799999999999986----61467767079973788557789999998618985312576443--34
Q gi|254780552|r 20 SLLRPRTLEEFTGQVEACSNLKVFIEAA----KARAEALDHVLFVGPPGLGKTTLAQVVARELGVNFRSTSGPVIA--KA 93 (334)
Q Consensus 20 ~~lRP~~l~dviGQ~~~~~~l~~~i~a~----~~~~~~~~h~Lf~GPpG~GKTtlA~iiA~~l~~~~~~~s~~~~~--~~ 93 (334)
T Consensus 113 e~~~~it~ddViGqEeAK~kcrli~~yLenPe~Fg~WAPknVLFyGppGTGKTm~Akalane~kvp~l~vkat~liGehV 192 (368)
T COG1223 113 EIISDITLDDVIGQEEAKRKCRLIMEYLENPERFGDWAPKNVLFYGPPGTGKTMMAKALANEAKVPLLLVKATELIGEHV 192 (368)
T ss_pred HHHCCCCHHHHHCHHHHHHHHHHHHHHHHCHHHHCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCEEEECHHHHHHHHH
T ss_conf 66136617664163988888799999964968763457541687789996487999987254578548711688888774
Q ss_pred HH----HHHHHHHHH--CCCHHHHHHHHHC--CHHHH----------HHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCE
Q ss_conf 67----666666410--1637888757616--98999----------999998634751002567876520004667400
Q gi|254780552|r 94 GD----LAALLTNLE--DRDVLFIDEIHRL--SIIVE----------EILYPAMEDFQLDLMVGEGPSARSVKINLSRFT 155 (334)
Q Consensus 94 ~d----l~~~~~~~~--~~~vlfiDEihrl--~~~~q----------~~Ll~~mE~~~i~i~~~~~~~a~~~~~~~~~f~ 155 (334)
T Consensus 193 Gdgar~Ihely~rA~~~aPcivFiDE~DAiaLdRryQelRGDVsEiVNALLTelDg----i--~en----------eGVv 256 (368)
T COG1223 193 GDGARRIHELYERARKAAPCIVFIDELDAIALDRRYQELRGDVSEIVNALLTELDG----I--KEN----------EGVV 256 (368)
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCC----C--CCC----------CCEE
T ss_conf 35989999999988751984998400245553045788645499999999985017----4--457----------7569
Q ss_pred EEECCCCCCCCCHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCC-CHHHH-HHHHHHHHHHH
Q ss_conf 55204554335545442012067326454799999877765412101111111233202210-15678-87775433345
Q gi|254780552|r 156 LIAATTRVGLLTNPLQDRFGIPIRLNFYEIEDLKTIVQRGAKLTGLAVTDEAACEIAMRSRG-TPRIA-GRLLRRVRDFA 233 (334)
Q Consensus 156 lI~ATt~~~~l~~~l~sR~~~~~~~~~~~~~el~~il~~~~~~~~i~~~~~al~~ia~~s~G-d~R~A-lnlLe~v~d~a 233 (334)
T Consensus 257 tIaaTN~p~~LD~aiRsRFEeEIEF~LP~~eEr~~ile~y~k~~Plpv~~~-~~~~~~~t~g~SgRdikekvlK~aLh~A 335 (368)
T COG1223 257 TIAATNRPELLDPAIRSRFEEEIEFKLPNDEERLEILEYYAKKFPLPVDAD-LRYLAAKTKGMSGRDIKEKVLKTALHRA 335 (368)
T ss_pred EEEECCCHHHCCHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHCCCCCCCC-HHHHHHHHCCCCCHHHHHHHHHHHHHHH
T ss_conf 995059846507888865565065648885899999999898589765568-9999998478772068999999999999
Q ss_pred HHHCCCCCCHHHHHHHHHH
Q ss_conf 5415886427787876542
Q gi|254780552|r 234 EVAHAKTITREIADAALLR 252 (334)
Q Consensus 234 ~~~~~~~i~~~~~~~~l~~ 252 (334)
T Consensus 336 i~ed~e~v~~edie~al~k 354 (368)
T COG1223 336 IAEDREKVEREDIEKALKK 354 (368)
T ss_pred HHHCHHHHHHHHHHHHHHH
T ss_conf 8713444338899999986