HHsearch alignment for GI: 254780552 and conserved domain: COG1373

Probab=97.91  E-value=0.00068  Score=43.33  Aligned_cols=116  Identities=22%  Similarity=0.273  Sum_probs=58.2

Q ss_pred             CEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCC----CCHHHHHHHHHHHH--CCCHHHHHHHHHCCHHHHHHHHHHH
Q ss_conf             07997378855778999999861898531257644----33467666666410--1637888757616989999999986
Q gi|254780552|r   56 HVLFVGPPGLGKTTLAQVVARELGVNFRSTSGPVI----AKAGDLAALLTNLE--DRDVLFIDEIHRLSIIVEEILYPAM  129 (334)
Q Consensus        56 h~Lf~GPpG~GKTtlA~iiA~~l~~~~~~~s~~~~----~~~~dl~~~~~~~~--~~~vlfiDEihrl~~~~q~~Ll~~m  129 (334)
T Consensus        39 i~~i~GpR~~GKTtllk~l~~~~~~~~iy~~~~d~~~~~~~l~d~~~~~~~~~~~~~~yifLDEIq~v~~W-~~~lk~l~  117 (398)
T COG1373          39 IILILGPRQVGKTTLLKLLIKGLLEEIIYINFDDLRLDRIELLDLLRAYIELKEREKSYIFLDEIQNVPDW-ERALKYLY  117 (398)
T ss_pred             EEEEECCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHH-HHHHHHHH
T ss_conf             49998886477899999999747773599973620001356778999999852225745999833376108-99999997


Q ss_pred             HCCCCCC-CCCCCCCCCEEECCCCCCEEEECCCCCCCCCHHHHHCCCCEEECCCCCHHHHHH
Q ss_conf             3475100-256787652000466740055204554335545442012067326454799999
Q gi|254780552|r  130 EDFQLDL-MVGEGPSARSVKINLSRFTLIAATTRVGLLTNPLQDRFGIPIRLNFYEIEDLKT  190 (334)
Q Consensus       130 E~~~i~i-~~~~~~~a~~~~~~~~~f~lI~ATt~~~~l~~~l~sR~~~~~~~~~~~~~el~~  190 (334)
T Consensus       118 d~~~~~v~itgsss~ll-----------------~~~~s~~L~GR~-~~~~l~PlSF~Efl~  161 (398)
T COG1373         118 DRGNLDVLITGSSSSLL-----------------SKEISESLAGRG-KDLELYPLSFREFLK  161 (398)
T ss_pred             CCCCCEEEEECCCHHHH-----------------CCCHHHHCCCCE-EEEEECCCCHHHHHH
T ss_conf             56775099983716754-----------------133023249982-378984888899864