HHsearch alignment for GI: 254780552 and conserved domain: COG1484

Probab=98.40  E-value=4.6e-07  Score=62.68  Aligned_cols=100  Identities=28%  Similarity=0.427  Sum_probs=54.1

Q ss_pred             CHHHHCCHHH----HHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHCC---CCCCCCCCCCCCCHHHHHH
Q ss_conf             8778239799----99999999998661467767079973788557789999998618---9853125764433467666
Q gi|254780552|r   26 TLEEFTGQVE----ACSNLKVFIEAAKARAEALDHVLFVGPPGLGKTTLAQVVARELG---VNFRSTSGPVIAKAGDLAA   98 (334)
Q Consensus        26 ~l~dviGQ~~----~~~~l~~~i~a~~~~~~~~~h~Lf~GPpG~GKTtlA~iiA~~l~---~~~~~~s~~~~~~~~dl~~   98 (334)
T Consensus        77 ~~~d~~~~~~~~~~~l~~~~~~~~~~~-~---~~nl~l~G~~G~GKthLa~Ai~~~l~~~g~sv~f~~~~el--~~~Lk~  150 (254)
T COG1484          77 EEFDFEFQPGIDKKALEDLASLVEFFE-R---GENLVLLGPPGVGKTHLAIAIGNELLKAGISVLFITAPDL--LSKLKA  150 (254)
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHC-C---CCCEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEHHHH--HHHHHH
T ss_conf             430235885566999999999998732-5---8828998999987999999999999983984999885999--999999


Q ss_pred             H---------HHH-HHCCCHHHHHHHHHCCHH--HHHHHHHHHHC
Q ss_conf             6---------664-101637888757616989--99999998634
Q gi|254780552|r   99 L---------LTN-LEDRDVLFIDEIHRLSII--VEEILYPAMED  131 (334)
Q Consensus        99 ~---------~~~-~~~~~vlfiDEihrl~~~--~q~~Ll~~mE~  131 (334)
T Consensus       151 ~~~~~~~~~~l~~~l~~~dlLIiDDlG~~~~~~~~~~~~~q~I~~  195 (254)
T COG1484         151 AFDEGRLEEKLLRELKKVDLLIIDDIGYEPFSQEEADLLFQLISR  195 (254)
T ss_pred             HHHCCCHHHHHHHHHHHCCEEEEECCCCCCCCCHHHHHHHHHHHH
T ss_conf             874552689999887528989982367766881558799999999