HHsearch alignment for GI: 254780552 and conserved domain: COG3284
>COG3284 AcoR Transcriptional activator of acetoin/glycerol metabolism [Secondary metabolites biosynthesis, transport, and catabolism / Transcription].
Probab=98.86 E-value=2.6e-07 Score=64.26 Aligned_cols=169 Identities=25% Similarity=0.382 Sum_probs=107.7
Q ss_pred CEEEECCCCCCHHHHHHHHHHHC--CCCCCCCCCCCCCCH---HHHH----HHHHHH-----------HCCCHHHHHHHH
Q ss_conf 07997378855778999999861--898531257644334---6766----666641-----------016378887576
Q gi|254780552|r 56 HVLFVGPPGLGKTTLAQVVAREL--GVNFRSTSGPVIAKA---GDLA----ALLTNL-----------EDRDVLFIDEIH 115 (334)
Q Consensus 56 h~Lf~GPpG~GKTtlA~iiA~~l--~~~~~~~s~~~~~~~---~dl~----~~~~~~-----------~~~~vlfiDEih 115 (334)
T Consensus 338 pvll~GEtGtGKe~laraiH~~s~~~gpfvAvNCaAip~~liesELFGy~~GafTga~~kG~~g~~~~A~gGtlFldeIg 417 (606)
T COG3284 338 PVLLQGETGTGKEVLARAIHQNSEAAGPFVAVNCAAIPEALIESELFGYVAGAFTGARRKGYKGKLEQADGGTLFLDEIG 417 (606)
T ss_pred CEEECCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHCCCCCCCCCCHHCCCCCCCEECCCCCCHHHHHH
T ss_conf 76853876556899999998536556983799850344776467774457656433001066554101578760898761
Q ss_pred HCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCEEEECCCCCC-------C-------------C-CHHHHHCC
Q ss_conf 1698999999998634751002567876520004667400552045543-------3-------------5-54544201
Q gi|254780552|r 116 RLSIIVEEILYPAMEDFQLDLMVGEGPSARSVKINLSRFTLIAATTRVG-------L-------------L-TNPLQDRF 174 (334)
Q Consensus 116 rl~~~~q~~Ll~~mE~~~i~i~~~~~~~a~~~~~~~~~f~lI~ATt~~~-------~-------------l-~~~l~sR~ 174 (334)
T Consensus 418 d~p~~~Qs~LLrVl~e~~v~p-~g~~---~-~~vd---irvi~ath~dl~~lv~~g~fredLyyrL~~~~i~lP~lr~R~ 489 (606)
T COG3284 418 DMPLALQSRLLRVLQEGVVTP-LGGT---R-IKVD---IRVIAATHRDLAQLVEQGRFREDLYYRLNAFVITLPPLRERS 489 (606)
T ss_pred HCHHHHHHHHHHHHHHCCEEC-CCCC---C-EEEE---EEEEECCCCCHHHHHHCCCCHHHHHHHHCCEEECCCCHHCCC
T ss_conf 141899999999986182523-5885---2-1577---999834675799998759714878887447155068611046
Q ss_pred CCEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHH-CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHH
Q ss_conf 20673264547999998777654121011111112332-02210156788777543334554158864277
Q gi|254780552|r 175 GIPIRLNFYEIEDLKTIVQRGAKLTGLAVTDEAACEIA-MRSRGTPRIAGRLLRRVRDFAEVAHAKTITRE 244 (334)
Q Consensus 175 ~~~~~~~~~~~~el~~il~~~~~~~~i~~~~~al~~ia-~~s~Gd~R~AlnlLe~v~d~a~~~~~~~i~~~ 244 (334)
T Consensus 490 d--------~~~~l~~~~~~~~~-~~~~l~~~~~~~l~~~~WPGNirel~~v~~~~~---~l~~~g~~~~~ 548 (606)
T COG3284 490 D--------RIPLLDRILKREND-WRLQLDDDALARLLAYRWPGNIRELDNVIERLA---ALSDGGRIRVS 548 (606)
T ss_pred C--------CHHHHHHHHHHCCC-CCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHH---HCCCCCEEECC
T ss_conf 6--------57899999987268-775689999999985789982899999999998---70799735714