HHsearch alignment for GI: 254780552 and conserved domain: KOG0478

Probab=98.89  E-value=6.9e-08  Score=67.72  Aligned_cols=145  Identities=26%  Similarity=0.281  Sum_probs=85.9

Q ss_pred             HHCCHHHHHHHHHHHHHHHH---------HCCCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCC---------C
Q ss_conf             82397999999999999866---------14677670799737885577899999986189853125764---------4
Q gi|254780552|r   29 EFTGQVEACSNLKVFIEAAK---------ARAEALDHVLFVGPPGLGKTTLAQVVARELGVNFRSTSGPV---------I   90 (334)
Q Consensus        29 dviGQ~~~~~~l~~~i~a~~---------~~~~~~~h~Lf~GPpG~GKTtlA~iiA~~l~~~~~~~s~~~---------~   90 (334)
T Consensus       430 sIye~edvKkglLLqLfGGt~k~~~~~~~~R~~--INILL~GDPGtsKSqlLqyv~~l~pRg-~yTSGkGsSavGLTayV  506 (804)
T KOG0478         430 SIYELEDVKKGLLLQLFGGTRKEDEKSGRFRGD--INILLVGDPGTSKSQLLQYCHRLLPRG-VYTSGKGSSAVGLTAYV  506 (804)
T ss_pred             HHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCC--CEEEEECCCCCCHHHHHHHHHHHCCCC-EEECCCCCCHHCCEEEE
T ss_conf             653442266667788756876322334442455--228994699867899999999747754-04058763022003567


Q ss_pred             CCHHHHHHHHH-----HHHCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCC---CCCCCCCEEECCCCCCEEEECCC-
Q ss_conf             33467666666-----4101637888757616989999999986347510025---67876520004667400552045-
Q gi|254780552|r   91 AKAGDLAALLT-----NLEDRDVLFIDEIHRLSIIVEEILYPAMEDFQLDLMV---GEGPSARSVKINLSRFTLIAATT-  161 (334)
Q Consensus        91 ~~~~dl~~~~~-----~~~~~~vlfiDEihrl~~~~q~~Ll~~mE~~~i~i~~---~~~~~a~~~~~~~~~f~lI~ATt-  161 (334)
T Consensus       507 trd~dtkqlVLesGALVLSD~GiCCIDEFDKM~dStrSvLhEvMEQQTvSIAKAGII~sLNAR~--------SVLAaANP  578 (804)
T KOG0478         507 TKDPDTRQLVLESGALVLSDNGICCIDEFDKMSDSTRSVLHEVMEQQTLSIAKAGIIASLNARC--------SVLAAANP  578 (804)
T ss_pred             EECCCCCEEEEECCCEEECCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCC--------EEEEEECC
T ss_conf             7657655466504848972896577112333327788999999987631174302234216653--------03445354


Q ss_pred             ------------CCCCCCHHHHHCCCCEEE-CCCCC
Q ss_conf             ------------543355454420120673-26454
Q gi|254780552|r  162 ------------RVGLLTNPLQDRFGIPIR-LNFYE  184 (334)
Q Consensus       162 ------------~~~~l~~~l~sR~~~~~~-~~~~~  184 (334)
T Consensus       579 ~~skynp~k~i~eNI~LpptLLSRFDLIylllD~~D  614 (804)
T KOG0478         579 IRSKYNPNKSIIENINLPPTLLSRFDLIFLLLDKPD  614 (804)
T ss_pred             CCCCCCCCCCHHHCCCCCHHHHHHHCEEEEEECCCC
T ss_conf             324579997623216788056432337899842753